# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SBP_bac_5 PF00496.22 gi|452208620|ref|YP_007488734.1| - 2.3e-76 257.2 5.6 3e-76 256.9 5.6 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle EF-hand_5 PF13202.6 gi|452208620|ref|YP_007488734.1| - 0.047 13.2 0.2 0.14 11.7 0.2 1.8 1 0 0 1 1 1 0 EF hand SBP_bac_5 PF00496.22 gi|452208621|ref|YP_007488735.1| - 3.3e-71 240.2 8.9 4.2e-71 239.9 8.9 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle DUF3872 PF12988.7 gi|452208621|ref|YP_007488735.1| - 0.12 12.2 0.1 0.63 9.9 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function, B. Theta Gene description (DUF3872) BPD_transp_1 PF00528.22 gi|452208622|ref|YP_007488736.1| - 6.7e-41 140.1 11.0 9.1e-41 139.6 11.0 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|452208623|ref|YP_007488737.1| - 1.1e-21 77.5 11.1 1.1e-21 77.5 11.1 1.9 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|452208624|ref|YP_007488738.1| - 4.8e-22 78.9 0.0 7.1e-22 78.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|452208624|ref|YP_007488738.1| - 6.2e-10 39.5 0.0 1.3e-09 38.4 0.0 1.6 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_22 PF13401.6 gi|452208624|ref|YP_007488738.1| - 3.3e-05 24.2 0.0 0.00011 22.5 0.0 1.8 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|452208624|ref|YP_007488738.1| - 0.00024 20.6 0.3 0.028 13.8 0.3 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain Mg_chelatase PF01078.21 gi|452208624|ref|YP_007488738.1| - 0.00071 19.0 0.2 0.0019 17.6 0.2 1.7 1 1 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_29 PF13555.6 gi|452208624|ref|YP_007488738.1| - 0.0043 16.8 0.1 0.0079 15.9 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|452208624|ref|YP_007488738.1| - 0.0093 16.4 0.0 0.013 15.9 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain NB-ARC PF00931.22 gi|452208624|ref|YP_007488738.1| - 0.03 13.5 0.1 0.28 10.4 0.1 2.0 2 0 0 2 2 2 0 NB-ARC domain AAA_21 PF13304.6 gi|452208624|ref|YP_007488738.1| - 0.041 13.7 0.1 6.5 6.5 0.0 2.2 1 1 1 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_33 PF13671.6 gi|452208624|ref|YP_007488738.1| - 0.076 13.2 0.0 0.15 12.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|452208624|ref|YP_007488738.1| - 0.1 12.5 0.1 0.19 11.6 0.1 1.5 1 0 0 1 1 1 0 RsgA GTPase ABC_tran PF00005.27 gi|452208625|ref|YP_007488739.1| - 1.9e-24 86.7 0.0 2.6e-24 86.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_22 PF13401.6 gi|452208625|ref|YP_007488739.1| - 5.6e-05 23.4 0.1 0.00018 21.8 0.1 1.7 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|452208625|ref|YP_007488739.1| - 0.00012 21.6 0.0 0.0087 15.5 0.0 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|452208625|ref|YP_007488739.1| - 0.00091 19.2 0.6 0.0032 17.4 0.2 1.8 2 0 0 2 2 2 1 RsgA GTPase AAA_21 PF13304.6 gi|452208625|ref|YP_007488739.1| - 0.0023 17.8 0.0 0.049 13.4 0.0 2.1 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|452208625|ref|YP_007488739.1| - 0.0039 16.9 2.2 0.0052 16.5 0.2 2.0 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_18 PF13238.6 gi|452208625|ref|YP_007488739.1| - 0.0071 16.9 0.0 0.013 16.0 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|452208625|ref|YP_007488739.1| - 0.019 14.7 0.0 0.072 12.8 0.0 1.8 1 1 0 1 1 1 0 AAA domain PduV-EutP PF10662.9 gi|452208625|ref|YP_007488739.1| - 0.021 14.6 0.3 0.047 13.4 0.0 1.6 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation TniB PF05621.11 gi|452208625|ref|YP_007488739.1| - 0.022 14.2 0.0 3.3 7.1 0.0 2.1 2 0 0 2 2 2 0 Bacterial TniB protein AAA_16 PF13191.6 gi|452208625|ref|YP_007488739.1| - 0.034 14.5 0.0 0.041 14.3 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain CLP1_P PF16575.5 gi|452208625|ref|YP_007488739.1| - 0.08 12.7 0.1 0.13 12.1 0.1 1.3 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop KAP_NTPase PF07693.14 gi|452208625|ref|YP_007488739.1| - 0.11 11.7 0.0 0.18 11.0 0.0 1.4 1 1 0 1 1 1 0 KAP family P-loop domain MMR_HSR1 PF01926.23 gi|452208625|ref|YP_007488739.1| - 0.13 12.3 0.2 0.23 11.5 0.2 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase CsiD PF08943.10 gi|452208625|ref|YP_007488739.1| - 0.13 11.3 0.0 0.18 10.9 0.0 1.1 1 0 0 1 1 1 0 CsiD AAA PF00004.29 gi|452208625|ref|YP_007488739.1| - 0.18 12.3 0.2 0.47 10.9 0.2 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DUF389 PF04087.14 gi|452208626|ref|YP_007488740.1| - 2.1e-36 125.1 17.6 2.1e-36 125.1 17.6 2.4 3 0 0 3 3 3 1 Domain of unknown function (DUF389) SCIMP PF15050.6 gi|452208626|ref|YP_007488740.1| - 0.051 14.0 0.1 0.13 12.7 0.1 1.6 1 0 0 1 1 1 0 SCIMP protein G0-G1_switch_2 PF15103.6 gi|452208626|ref|YP_007488740.1| - 0.12 12.8 0.1 0.23 11.9 0.1 1.5 1 0 0 1 1 1 0 G0/G1 switch protein 2 DUF5429 PF17494.2 gi|452208626|ref|YP_007488740.1| - 0.16 12.1 1.3 0.35 10.9 0.4 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5429) DUF1269 PF06897.12 gi|452208626|ref|YP_007488740.1| - 5.8 7.3 9.0 37 4.7 4.9 3.1 2 1 0 2 2 2 0 Protein of unknown function (DUF1269) DUF998 PF06197.13 gi|452208627|ref|YP_007488741.1| - 8.1e-21 74.5 17.7 1e-20 74.1 17.7 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF998) DNA_ligase_ZBD PF03119.16 gi|452208628|ref|YP_007488742.1| - 0.00024 21.1 1.1 0.00043 20.3 1.1 1.5 1 1 0 1 1 1 1 NAD-dependent DNA ligase C4 zinc finger domain Lar_restr_allev PF14354.6 gi|452208628|ref|YP_007488742.1| - 0.0057 17.0 0.4 0.0064 16.8 0.4 1.1 1 0 0 1 1 1 1 Restriction alleviation protein Lar FlhC PF05280.11 gi|452208628|ref|YP_007488742.1| - 0.024 14.3 0.6 0.028 14.1 0.6 1.0 1 0 0 1 1 1 0 Flagellar transcriptional activator (FlhC) DUF2256 PF10013.9 gi|452208628|ref|YP_007488742.1| - 0.028 14.5 0.9 0.056 13.6 0.9 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2256) zinc_ribbon_9 PF14369.6 gi|452208628|ref|YP_007488742.1| - 0.042 14.1 0.1 0.077 13.3 0.1 1.4 1 0 0 1 1 1 0 zinc-ribbon TF_Zn_Ribbon PF08271.12 gi|452208628|ref|YP_007488742.1| - 0.045 13.3 0.3 0.075 12.6 0.3 1.4 1 0 0 1 1 1 0 TFIIB zinc-binding DUF1699 PF08004.11 gi|452208629|ref|YP_007488743.1| - 3e-24 85.2 0.3 3.3e-24 85.0 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) DnaJ_CXXCXGXG PF00684.19 gi|452208630|ref|YP_007488744.1| - 1e-05 25.8 12.7 2.6e-05 24.5 12.7 1.7 1 1 0 1 1 1 1 DnaJ central domain Anti-TRAP PF15777.5 gi|452208630|ref|YP_007488744.1| - 0.00047 20.1 5.3 0.00047 20.1 5.3 3.0 1 1 2 3 3 3 3 Tryptophan RNA-binding attenuator protein inhibitory protein DUF5351 PF17302.2 gi|452208630|ref|YP_007488744.1| - 0.031 14.5 16.7 5.1 7.4 0.2 4.0 2 2 2 4 4 4 0 Family of unknown function (DUF5351) Prim_Zn_Ribbon PF08273.12 gi|452208630|ref|YP_007488744.1| - 4.5 7.7 17.7 0.65 10.3 3.9 3.2 2 1 1 3 3 3 0 Zinc-binding domain of primase-helicase DUF1428 PF07237.11 gi|452208631|ref|YP_007488745.1| - 3.3e-37 126.8 1.2 3.9e-37 126.6 1.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1428) NIPSNAP PF07978.13 gi|452208631|ref|YP_007488745.1| - 0.031 14.5 0.0 0.047 13.9 0.0 1.3 1 0 0 1 1 1 0 NIPSNAP Rax2 PF12768.7 gi|452208633|ref|YP_007488747.1| - 0.015 14.8 0.1 0.023 14.1 0.1 1.2 1 0 0 1 1 1 0 Cortical protein marker for cell polarity Frigida PF07899.11 gi|452208634|ref|YP_007488748.1| - 0.049 12.9 0.0 0.052 12.8 0.0 1.0 1 0 0 1 1 1 0 Frigida-like protein Prenyltransf PF01255.19 gi|452208635|ref|YP_007488749.1| - 1.6e-20 73.6 0.0 2.3e-20 73.1 0.0 1.2 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase Methyltransf_25 PF13649.6 gi|452208636|ref|YP_007488750.1| - 8.8e-22 77.6 0.3 1.4e-21 77.0 0.3 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|452208636|ref|YP_007488750.1| - 3.6e-20 72.4 0.2 5.7e-20 71.8 0.2 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|452208636|ref|YP_007488750.1| - 1.8e-18 66.8 0.0 2.3e-18 66.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain TPMT PF05724.11 gi|452208636|ref|YP_007488750.1| - 6.1e-18 65.3 0.0 8.7e-18 64.8 0.0 1.2 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_12 PF08242.12 gi|452208636|ref|YP_007488750.1| - 2.3e-16 60.3 0.1 3.2e-16 59.9 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|452208636|ref|YP_007488750.1| - 1.1e-13 51.4 0.0 1.3e-13 51.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|452208636|ref|YP_007488750.1| - 7.8e-10 38.5 0.0 8.9e-10 38.3 0.0 1.0 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase TehB PF03848.14 gi|452208636|ref|YP_007488750.1| - 1.2e-09 37.9 0.0 1.4e-09 37.6 0.0 1.1 1 0 0 1 1 1 1 Tellurite resistance protein TehB Ubie_methyltran PF01209.18 gi|452208636|ref|YP_007488750.1| - 2e-08 33.9 0.1 2.5e-08 33.5 0.1 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MTS PF05175.14 gi|452208636|ref|YP_007488750.1| - 3.1e-08 33.4 0.0 4e-08 33.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|452208636|ref|YP_007488750.1| - 5.8e-06 25.9 0.0 7.4e-06 25.6 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) NodS PF05401.11 gi|452208636|ref|YP_007488750.1| - 0.00022 20.9 0.0 0.00029 20.5 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_4 PF02390.17 gi|452208636|ref|YP_007488750.1| - 0.00023 20.7 0.3 0.00088 18.8 0.3 1.8 1 1 0 1 1 1 1 Putative methyltransferase Methyltransf_15 PF09445.10 gi|452208636|ref|YP_007488750.1| - 0.00028 20.5 0.1 0.00052 19.6 0.1 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase MetW PF07021.12 gi|452208636|ref|YP_007488750.1| - 0.0011 18.7 0.1 0.0014 18.2 0.1 1.1 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_18 PF12847.7 gi|452208636|ref|YP_007488750.1| - 0.0019 18.1 0.2 0.0028 17.6 0.2 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 gi|452208636|ref|YP_007488750.1| - 0.0048 16.9 0.0 0.0071 16.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|452208636|ref|YP_007488750.1| - 0.0076 16.0 0.2 0.012 15.4 0.1 1.3 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) AdoMet_MTase PF07757.13 gi|452208636|ref|YP_007488750.1| - 0.017 15.4 0.0 0.028 14.7 0.0 1.3 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase UPF0020 PF01170.18 gi|452208636|ref|YP_007488750.1| - 0.056 13.1 0.1 0.13 11.9 0.1 1.6 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 CtaG_Cox11 PF04442.14 gi|452208636|ref|YP_007488750.1| - 0.12 12.4 0.0 0.18 11.8 0.0 1.2 1 0 0 1 1 1 0 Cytochrome c oxidase assembly protein CtaG/Cox11 Methyltransf_8 PF05148.15 gi|452208636|ref|YP_007488750.1| - 0.13 12.1 0.3 0.57 10.0 0.3 1.9 1 1 0 1 1 1 0 Hypothetical methyltransferase zinc_ribbon_6 PF14599.6 gi|452208637|ref|YP_007488751.1| - 0.0079 16.2 2.6 0.1 12.6 0.2 2.1 1 1 1 2 2 2 2 Zinc-ribbon Zn_ribbon_SprT PF17283.2 gi|452208637|ref|YP_007488751.1| - 0.017 15.0 0.5 0.024 14.5 0.5 1.2 1 0 0 1 1 1 0 SprT-like zinc ribbon domain zinc_ribbon_6 PF14599.6 gi|452208639|ref|YP_007488753.1| - 0.0015 18.5 0.4 0.0027 17.7 0.4 1.5 1 1 0 1 1 1 1 Zinc-ribbon OrfB_Zn_ribbon PF07282.11 gi|452208639|ref|YP_007488753.1| - 0.021 14.7 0.7 0.022 14.7 0.7 1.2 1 0 0 1 1 1 0 Putative transposase DNA-binding domain eIF-1a PF01176.19 gi|452208640|ref|YP_007488754.1| - 6.7e-11 41.8 1.0 8.2e-11 41.6 1.0 1.1 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 DUF1317 PF07026.11 gi|452208640|ref|YP_007488754.1| - 0.13 12.1 0.1 0.14 12.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1317) Methyltransf_25 PF13649.6 gi|452208641|ref|YP_007488755.1| - 9.2e-21 74.4 0.0 9.3e-20 71.1 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|452208641|ref|YP_007488755.1| - 1.4e-20 73.7 0.0 5.6e-20 71.8 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|452208641|ref|YP_007488755.1| - 2.3e-18 66.4 0.0 6e-18 65.1 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|452208641|ref|YP_007488755.1| - 8.5e-18 64.5 0.0 1.6e-17 63.6 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|452208641|ref|YP_007488755.1| - 5.4e-14 52.7 0.0 1.6e-13 51.2 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|452208641|ref|YP_007488755.1| - 1.3e-13 51.1 0.0 2e-13 50.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|452208641|ref|YP_007488755.1| - 1.2e-06 28.4 0.0 2e-06 27.7 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_4 PF02390.17 gi|452208641|ref|YP_007488755.1| - 0.00016 21.2 0.0 0.00038 20.0 0.0 1.7 1 1 0 1 1 1 1 Putative methyltransferase MTS PF05175.14 gi|452208641|ref|YP_007488755.1| - 0.00023 20.8 0.0 0.00073 19.1 0.0 1.8 2 1 1 3 3 3 1 Methyltransferase small domain CMAS PF02353.20 gi|452208641|ref|YP_007488755.1| - 0.00027 20.3 0.0 0.00038 19.8 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase GCD14 PF08704.10 gi|452208641|ref|YP_007488755.1| - 0.0068 16.1 0.0 0.011 15.4 0.0 1.3 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_8 PF05148.15 gi|452208641|ref|YP_007488755.1| - 0.0068 16.3 0.0 0.13 12.1 0.0 2.1 2 0 0 2 2 2 1 Hypothetical methyltransferase Methyltransf_3 PF01596.17 gi|452208641|ref|YP_007488755.1| - 0.018 14.3 0.0 0.025 13.7 0.0 1.3 1 0 0 1 1 1 0 O-methyltransferase PrmA PF06325.13 gi|452208641|ref|YP_007488755.1| - 0.1 12.0 0.0 0.21 10.9 0.0 1.5 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) GidB PF02527.15 gi|452208641|ref|YP_007488755.1| - 0.13 11.6 0.0 0.37 10.1 0.0 1.7 2 0 0 2 2 2 0 rRNA small subunit methyltransferase G Fibrillarin PF01269.17 gi|452208641|ref|YP_007488755.1| - 0.15 11.2 0.0 0.23 10.5 0.0 1.2 1 0 0 1 1 1 0 Fibrillarin Pox_MCEL PF03291.16 gi|452208641|ref|YP_007488755.1| - 0.18 10.9 0.0 2.6 7.1 0.0 2.1 1 1 0 1 1 1 0 mRNA capping enzyme Zn_ribbon_SprT PF17283.2 gi|452208642|ref|YP_007488756.1| - 0.01 15.7 1.2 0.015 15.2 1.2 1.3 1 0 0 1 1 1 0 SprT-like zinc ribbon domain zinc_ribbon_6 PF14599.6 gi|452208642|ref|YP_007488756.1| - 0.078 13.0 1.0 0.23 11.5 1.1 1.7 1 1 1 2 2 2 0 Zinc-ribbon AAA_14 PF13173.6 gi|452208643|ref|YP_007488757.1| - 8.6e-39 132.6 0.0 1.6e-38 131.7 0.0 1.5 1 0 0 1 1 1 1 AAA domain DUF4143 PF13635.6 gi|452208643|ref|YP_007488757.1| - 5.3e-10 39.5 0.1 8.5e-10 38.8 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4143) ATPase_2 PF01637.18 gi|452208643|ref|YP_007488757.1| - 9.7e-06 25.7 0.5 0.00083 19.3 0.0 2.4 1 1 1 2 2 2 2 ATPase domain predominantly from Archaea AAA_22 PF13401.6 gi|452208643|ref|YP_007488757.1| - 0.0059 16.9 0.0 0.77 10.0 0.0 2.5 1 1 1 2 2 2 1 AAA domain Beta_protein PF14350.6 gi|452208643|ref|YP_007488757.1| - 0.18 11.2 0.0 0.28 10.5 0.0 1.2 1 0 0 1 1 1 0 Beta protein HTH_36 PF13730.6 gi|452208643|ref|YP_007488757.1| - 0.36 10.8 2.6 0.25 11.3 0.3 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain HEAT_2 PF13646.6 gi|452208644|ref|YP_007488758.1| - 8.2e-15 55.0 0.2 9.5e-07 29.1 0.1 3.7 3 1 1 4 4 4 3 HEAT repeats HEAT PF02985.22 gi|452208644|ref|YP_007488758.1| - 6.3e-10 38.5 0.0 0.19 12.0 0.0 5.2 5 0 0 5 5 5 3 HEAT repeat Adaptin_N PF01602.20 gi|452208644|ref|YP_007488758.1| - 3.5e-06 25.9 0.0 0.00054 18.7 0.0 2.9 1 1 1 2 2 2 2 Adaptin N terminal region Cnd1 PF12717.7 gi|452208644|ref|YP_007488758.1| - 3.8e-05 23.8 1.0 5.4 7.0 0.1 3.9 2 2 0 3 3 3 3 non-SMC mitotic condensation complex subunit 1 CLASP_N PF12348.8 gi|452208644|ref|YP_007488758.1| - 0.018 14.6 0.4 9.7 5.7 0.0 3.3 3 1 2 5 5 5 0 CLASP N terminal PPP1R35_C PF15503.6 gi|452208644|ref|YP_007488758.1| - 0.043 13.6 0.0 1.6 8.6 0.0 2.8 2 1 0 2 2 2 0 Protein phosphatase 1 regulatory subunit 35 C-terminus DNA_alkylation PF08713.11 gi|452208644|ref|YP_007488758.1| - 0.052 13.3 3.6 0.28 10.9 0.3 2.5 1 1 0 2 2 2 0 DNA alkylation repair enzyme HEAT_EZ PF13513.6 gi|452208644|ref|YP_007488758.1| - 0.098 13.2 0.1 5.9 7.5 0.0 3.4 3 1 1 4 4 4 0 HEAT-like repeat DUF600 PF04634.12 gi|452208644|ref|YP_007488758.1| - 0.17 11.9 4.1 5.8 7.0 0.2 3.2 3 1 0 3 3 3 0 Protein of unknown function, DUF600 Lebercilin PF15619.6 gi|452208644|ref|YP_007488758.1| - 1.3 8.6 4.7 4.7 6.8 0.1 3.2 3 1 1 4 4 4 0 Ciliary protein causing Leber congenital amaurosis disease zinc_ribbon_6 PF14599.6 gi|452208645|ref|YP_007488759.1| - 0.0042 17.1 0.9 0.01 15.9 1.0 1.6 1 1 1 2 2 2 1 Zinc-ribbon Zn_ribbon_SprT PF17283.2 gi|452208645|ref|YP_007488759.1| - 0.006 16.5 0.6 0.0088 15.9 0.6 1.2 1 0 0 1 1 1 1 SprT-like zinc ribbon domain HicB_lk_antitox PF15919.5 gi|452208646|ref|YP_007488760.1| - 1.2e-12 48.1 0.1 1.3e-12 47.9 0.1 1.1 1 0 0 1 1 1 1 HicB_like antitoxin of bacterial toxin-antitoxin system DUF1902 PF08972.11 gi|452208646|ref|YP_007488760.1| - 0.0073 16.3 0.0 0.0094 15.9 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1902) FANCI_S1-cap PF14674.6 gi|452208646|ref|YP_007488760.1| - 0.013 15.6 0.0 0.018 15.1 0.0 1.4 1 0 0 1 1 1 0 FANCI solenoid 1 cap HicA_toxin PF07927.12 gi|452208647|ref|YP_007488761.1| - 7.7e-16 57.9 0.3 8.9e-16 57.7 0.3 1.1 1 0 0 1 1 1 1 HicA toxin of bacterial toxin-antitoxin, GnsAB_toxin PF08178.11 gi|452208649|ref|YP_007488763.1| - 0.064 13.2 0.5 0.12 12.3 0.1 1.6 2 0 0 2 2 2 0 GnsA/GnsB toxin of bacterial toxin-antitoxin system P4Ha_N PF08336.11 gi|452208651|ref|YP_007488765.1| - 0.055 13.5 0.2 0.1 12.6 0.2 1.4 1 0 0 1 1 1 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region PuR_N PF09182.10 gi|452208651|ref|YP_007488765.1| - 0.06 13.3 0.1 0.18 11.7 0.0 1.8 2 0 0 2 2 2 0 Bacterial purine repressor, N-terminal HTH_5 PF01022.20 gi|452208651|ref|YP_007488765.1| - 0.1 12.5 0.0 0.2 11.5 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family KilA-N PF04383.13 gi|452208651|ref|YP_007488765.1| - 0.12 12.2 0.2 2.7 7.9 0.2 2.5 2 1 0 2 2 2 0 KilA-N domain DUF86 PF01934.17 gi|452208654|ref|YP_007488768.1| - 3.8e-11 42.9 0.0 4.5e-11 42.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF86 HicB_lk_antitox PF15919.5 gi|452208656|ref|YP_007488770.1| - 3.8e-13 49.6 0.1 3.8e-13 49.6 0.1 1.0 1 0 0 1 1 1 1 HicB_like antitoxin of bacterial toxin-antitoxin system DUF1902 PF08972.11 gi|452208656|ref|YP_007488770.1| - 0.0036 17.3 0.0 0.0039 17.1 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1902) FANCI_S1-cap PF14674.6 gi|452208656|ref|YP_007488770.1| - 0.033 14.3 0.1 0.051 13.7 0.1 1.4 1 1 0 1 1 1 0 FANCI solenoid 1 cap Jag_N PF14804.6 gi|452208656|ref|YP_007488770.1| - 0.26 11.7 2.3 5 7.6 2.3 2.3 1 1 0 1 1 1 0 Jag N-terminus HicA_toxin PF07927.12 gi|452208657|ref|YP_007488771.1| - 1.5e-16 60.2 0.2 1.9e-16 59.8 0.2 1.2 1 0 0 1 1 1 1 HicA toxin of bacterial toxin-antitoxin, B3 PF02362.21 gi|452208658|ref|YP_007488772.1| - 0.1 12.5 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 B3 DNA binding domain Arginosuc_synth PF00764.19 gi|452208659|ref|YP_007488773.1| - 3.4e-182 606.0 0.1 4e-182 605.8 0.1 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase QueC PF06508.13 gi|452208659|ref|YP_007488773.1| - 0.00014 21.4 0.0 0.0018 17.8 0.0 2.2 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC NAD_synthase PF02540.17 gi|452208659|ref|YP_007488773.1| - 0.009 15.2 0.0 0.011 14.8 0.0 1.3 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.16 gi|452208659|ref|YP_007488773.1| - 0.037 12.8 0.0 0.059 12.2 0.0 1.3 1 0 0 1 1 1 0 tRNA methyl transferase CPSase_L_D2 PF02786.17 gi|452208660|ref|YP_007488774.1| - 2.1e-106 354.1 0.7 1.8e-70 236.7 0.2 2.5 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_D3 PF02787.19 gi|452208660|ref|YP_007488774.1| - 3.2e-44 150.2 0.1 1.1e-43 148.5 0.1 2.0 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MGS PF02142.22 gi|452208660|ref|YP_007488774.1| - 2.4e-22 78.9 0.4 6.7e-20 71.1 0.0 3.9 4 0 0 4 4 4 1 MGS-like domain ATP-grasp PF02222.22 gi|452208660|ref|YP_007488774.1| - 1.8e-16 60.2 0.1 3.7e-08 33.1 0.0 2.4 2 0 0 2 2 2 2 ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|452208660|ref|YP_007488774.1| - 2.2e-16 60.0 0.1 3.6e-07 29.9 0.0 2.4 2 0 0 2 2 2 2 D-ala D-ala ligase C-terminus ATPgrasp_Ter PF15632.6 gi|452208660|ref|YP_007488774.1| - 1.7e-14 53.7 0.0 2.9e-06 27.0 0.0 2.8 2 1 0 2 2 2 2 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_3 PF02655.14 gi|452208660|ref|YP_007488774.1| - 1.4e-09 38.2 0.4 0.0023 18.0 0.0 2.6 2 0 0 2 2 2 2 ATP-grasp domain GARS_A PF01071.19 gi|452208660|ref|YP_007488774.1| - 1.7e-06 27.9 0.1 0.079 12.7 0.0 2.4 2 0 0 2 2 2 2 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_5 PF13549.6 gi|452208660|ref|YP_007488774.1| - 0.00017 21.1 0.0 0.0085 15.6 0.0 3.0 2 0 0 2 2 2 1 ATP-grasp domain ATP-grasp_2 PF08442.10 gi|452208660|ref|YP_007488774.1| - 0.017 14.7 0.0 3.6 7.1 0.0 3.3 4 0 0 4 4 4 0 ATP-grasp domain HTH_23 PF13384.6 gi|452208660|ref|YP_007488774.1| - 0.019 14.7 0.0 3 7.8 0.0 3.1 3 0 0 3 3 3 0 Homeodomain-like domain DUF433 PF04255.14 gi|452208660|ref|YP_007488774.1| - 0.056 13.3 0.0 5.4 7.0 0.0 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF433) Rrf2 PF02082.20 gi|452208660|ref|YP_007488774.1| - 0.072 13.4 0.2 19 5.7 0.0 3.3 3 0 0 3 3 3 0 Transcriptional regulator MerR_1 PF13411.6 gi|452208660|ref|YP_007488774.1| - 0.11 12.6 0.0 3.4 7.8 0.0 3.1 2 0 0 2 2 2 0 MerR HTH family regulatory protein Epimerase PF01370.21 gi|452208660|ref|YP_007488774.1| - 0.11 11.9 0.0 0.44 10.0 0.0 2.1 3 0 0 3 3 3 0 NAD dependent epimerase/dehydratase family CPSase_sm_chain PF00988.22 gi|452208661|ref|YP_007488775.1| - 9e-49 164.6 0.0 1.4e-48 163.9 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase small chain, CPSase domain GATase PF00117.28 gi|452208661|ref|YP_007488775.1| - 3e-41 141.3 0.0 4.4e-41 140.7 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|452208661|ref|YP_007488775.1| - 7.4e-07 29.1 0.1 0.039 13.7 0.1 2.4 1 1 1 2 2 2 2 Peptidase C26 ABC_tran PF00005.27 gi|452208662|ref|YP_007488776.1| - 4.3e-30 105.0 0.0 9.4e-30 103.9 0.0 1.6 1 0 0 1 1 1 1 ABC transporter CBS PF00571.28 gi|452208662|ref|YP_007488776.1| - 9.8e-14 51.5 0.5 2.5e-05 24.6 0.0 2.7 2 0 0 2 2 2 2 CBS domain AAA_21 PF13304.6 gi|452208662|ref|YP_007488776.1| - 8.3e-05 22.5 0.0 0.29 10.9 0.0 2.3 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system ABC_ATPase PF09818.9 gi|452208662|ref|YP_007488776.1| - 0.00017 20.6 0.1 0.078 11.8 0.0 3.1 3 0 0 3 3 3 1 Predicted ATPase of the ABC class AAA_16 PF13191.6 gi|452208662|ref|YP_007488776.1| - 0.024 15.0 0.1 0.068 13.5 0.1 1.9 1 1 0 1 1 1 0 AAA ATPase domain DUF1758 PF05585.12 gi|452208662|ref|YP_007488776.1| - 0.045 13.5 0.0 0.11 12.3 0.0 1.5 1 0 0 1 1 1 0 Putative peptidase (DUF1758) AAA_29 PF13555.6 gi|452208662|ref|YP_007488776.1| - 0.045 13.5 0.1 0.087 12.6 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_15 PF13175.6 gi|452208662|ref|YP_007488776.1| - 0.061 13.0 0.2 0.12 12.0 0.0 1.6 2 0 0 2 2 2 0 AAA ATPase domain SbcCD_C PF13558.6 gi|452208662|ref|YP_007488776.1| - 0.065 13.5 1.1 0.38 11.0 0.8 2.4 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA_22 PF13401.6 gi|452208662|ref|YP_007488776.1| - 0.29 11.4 1.9 1.9 8.7 0.7 2.7 2 1 0 2 2 2 0 AAA domain BPD_transp_1 PF00528.22 gi|452208663|ref|YP_007488777.1| - 8.1e-28 97.4 9.3 8.1e-28 97.4 9.3 2.1 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OpuAC PF04069.12 gi|452208664|ref|YP_007488778.1| - 1e-69 235.0 1.5 1.2e-69 234.8 1.5 1.0 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system NosD PF05048.13 gi|452208665|ref|YP_007488779.1| - 1.8e-46 158.4 61.8 6.5e-44 150.0 28.3 4.8 4 1 1 5 5 5 2 Periplasmic copper-binding protein (NosD) PKD PF00801.20 gi|452208665|ref|YP_007488779.1| - 1.3e-19 69.8 8.3 2.2e-09 37.0 2.6 3.1 2 0 0 2 2 2 2 PKD domain Beta_helix PF13229.6 gi|452208665|ref|YP_007488779.1| - 9.8e-16 58.0 54.0 6e-11 42.5 29.0 5.0 3 2 2 5 5 5 2 Right handed beta helix region Lactonase PF10282.9 gi|452208665|ref|YP_007488779.1| - 5.9e-12 45.5 4.5 0.00032 20.1 0.1 3.3 1 1 3 4 4 4 4 Lactonase, 7-bladed beta-propeller SGL PF08450.12 gi|452208665|ref|YP_007488779.1| - 8.7e-12 45.1 6.0 5.4e-05 22.9 1.9 3.7 1 1 3 4 4 4 4 SMP-30/Gluconolactonase/LRE-like region NHL PF01436.21 gi|452208665|ref|YP_007488779.1| - 3.5e-11 42.6 6.4 0.35 11.0 0.0 6.2 5 0 0 5 5 5 4 NHL repeat Cytochrom_D1 PF02239.16 gi|452208665|ref|YP_007488779.1| - 1.5e-08 33.6 6.0 2.8e-05 22.8 0.3 3.2 2 1 1 3 3 3 2 Cytochrome D1 heme domain Arylesterase PF01731.20 gi|452208665|ref|YP_007488779.1| - 0.0002 21.5 8.2 0.22 11.8 0.2 5.8 3 2 3 6 6 6 1 Arylesterase PD40 PF07676.12 gi|452208665|ref|YP_007488779.1| - 0.0038 17.1 0.0 30 4.7 0.0 5.1 5 0 0 5 5 5 0 WD40-like Beta Propeller Repeat PKD_3 PF16820.5 gi|452208665|ref|YP_007488779.1| - 0.034 13.9 0.5 3.9 7.3 0.1 2.6 2 0 0 2 2 2 0 PKD-like domain SBP56 PF05694.11 gi|452208665|ref|YP_007488779.1| - 0.043 12.6 0.1 11 4.7 0.0 3.4 1 1 2 4 4 4 0 56kDa selenium binding protein (SBP56) DUF1513 PF07433.11 gi|452208665|ref|YP_007488779.1| - 0.19 10.7 1.7 6.7 5.7 0.1 2.8 2 1 0 3 3 3 0 Protein of unknown function (DUF1513) HIRA_B PF09453.10 gi|452208665|ref|YP_007488779.1| - 0.42 10.5 2.1 21 5.1 0.0 3.6 4 0 0 4 4 4 0 HIRA B motif PCC_BT PF18140.1 gi|452208665|ref|YP_007488779.1| - 1.3 9.4 12.3 1.4 9.3 1.4 3.4 2 1 2 4 4 4 0 Propionyl-coenzyme A carboxylase BT domain TPR_1 PF00515.28 gi|452208666|ref|YP_007488780.1| - 1.2e-42 142.0 2.4 9.9e-09 34.7 0.0 7.2 5 1 2 7 7 7 7 Tetratricopeptide repeat TPR_2 PF07719.17 gi|452208666|ref|YP_007488780.1| - 3e-36 120.6 3.9 1.7e-07 30.8 0.0 7.2 6 1 1 7 7 7 7 Tetratricopeptide repeat TPR_8 PF13181.6 gi|452208666|ref|YP_007488780.1| - 1.8e-30 102.6 3.4 3e-05 23.9 0.0 7.2 6 1 1 7 7 7 5 Tetratricopeptide repeat TPR_11 PF13414.6 gi|452208666|ref|YP_007488780.1| - 9.9e-27 92.4 0.9 2.2e-07 30.4 0.0 7.8 5 2 2 7 7 7 6 TPR repeat TPR_14 PF13428.6 gi|452208666|ref|YP_007488780.1| - 5.1e-21 73.6 1.5 0.003 18.2 0.0 6.6 2 2 5 7 7 7 4 Tetratricopeptide repeat TPR_19 PF14559.6 gi|452208666|ref|YP_007488780.1| - 1.8e-20 73.2 1.4 2e-06 28.2 0.0 5.3 4 1 0 5 5 5 3 Tetratricopeptide repeat TPR_9 PF13371.6 gi|452208666|ref|YP_007488780.1| - 1.9e-20 72.7 0.1 5.5e-10 39.3 0.0 4.5 3 2 2 5 5 5 3 Tetratricopeptide repeat TPR_16 PF13432.6 gi|452208666|ref|YP_007488780.1| - 5.3e-20 71.8 0.0 3e-05 24.6 0.0 4.6 3 2 1 5 5 5 5 Tetratricopeptide repeat TPR_12 PF13424.6 gi|452208666|ref|YP_007488780.1| - 4.1e-19 68.6 1.5 5.9e-07 29.7 0.0 6.0 2 1 4 6 6 6 5 Tetratricopeptide repeat TPR_17 PF13431.6 gi|452208666|ref|YP_007488780.1| - 4.6e-16 58.0 0.0 0.017 15.5 0.0 6.7 7 1 0 7 7 7 3 Tetratricopeptide repeat TPR_7 PF13176.6 gi|452208666|ref|YP_007488780.1| - 2.4e-14 52.2 0.0 0.14 12.3 0.0 6.6 7 0 0 7 7 7 3 Tetratricopeptide repeat TPR_6 PF13174.6 gi|452208666|ref|YP_007488780.1| - 1e-12 47.8 1.2 0.32 11.7 0.0 6.2 6 0 0 6 6 6 3 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|452208666|ref|YP_007488780.1| - 1.2e-11 44.7 0.7 0.02 15.1 0.0 4.2 3 1 1 4 4 4 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_10 PF13374.6 gi|452208666|ref|YP_007488780.1| - 1.2e-09 37.7 0.5 0.055 13.4 0.0 6.2 5 1 1 6 6 6 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|452208666|ref|YP_007488780.1| - 3e-09 36.8 0.3 0.057 13.5 0.0 5.0 6 0 0 6 6 5 1 Fis1 C-terminal tetratricopeptide repeat NARP1 PF12569.8 gi|452208666|ref|YP_007488780.1| - 6.1e-07 28.7 0.0 0.057 12.3 0.0 3.8 3 1 1 4 4 4 2 NMDA receptor-regulated protein 1 TPR_15 PF13429.6 gi|452208666|ref|YP_007488780.1| - 1.3e-06 27.8 0.1 0.088 12.0 0.0 4.6 2 2 2 5 5 5 2 Tetratricopeptide repeat RPN7 PF10602.9 gi|452208666|ref|YP_007488780.1| - 9.3e-05 22.2 0.3 0.89 9.2 0.1 4.0 2 2 2 4 4 4 1 26S proteasome subunit RPN7 TPR_21 PF09976.9 gi|452208666|ref|YP_007488780.1| - 0.00072 19.3 0.0 52 3.5 0.0 4.8 3 2 2 5 5 5 0 Tetratricopeptide repeat-like domain TPR_4 PF07721.14 gi|452208666|ref|YP_007488780.1| - 0.0026 18.2 0.0 5.4 7.9 0.0 4.7 5 0 0 5 5 5 1 Tetratricopeptide repeat DUF3856 PF12968.7 gi|452208666|ref|YP_007488780.1| - 0.0027 17.8 1.2 8.5 6.4 0.5 4.6 3 1 1 4 4 4 0 Domain of Unknown Function (DUF3856) SRP_TPR_like PF17004.5 gi|452208666|ref|YP_007488780.1| - 0.0052 16.8 0.0 0.37 10.8 0.0 2.6 2 1 0 2 2 2 1 Putative TPR-like repeat BTAD PF03704.17 gi|452208666|ref|YP_007488780.1| - 0.017 15.6 1.0 0.3 11.5 0.2 2.8 2 1 1 3 3 3 0 Bacterial transcriptional activator domain MIT PF04212.18 gi|452208666|ref|YP_007488780.1| - 0.039 14.0 6.5 32 4.7 0.1 5.5 5 1 1 6 6 6 0 MIT (microtubule interacting and transport) domain Coatomer_E PF04733.14 gi|452208666|ref|YP_007488780.1| - 0.13 11.6 0.0 1.9 7.8 0.0 2.6 3 0 0 3 3 3 0 Coatomer epsilon subunit PPR PF01535.20 gi|452208666|ref|YP_007488780.1| - 0.47 10.8 0.0 0.47 10.8 0.0 5.8 7 1 1 8 8 5 0 PPR repeat Ank_2 PF12796.7 gi|452208667|ref|YP_007488781.1| - 6e-73 241.5 23.6 1.4e-13 51.2 0.1 5.1 1 1 6 7 7 7 7 Ankyrin repeats (3 copies) Ank_4 PF13637.6 gi|452208667|ref|YP_007488781.1| - 3.1e-47 158.3 3.3 1.6e-07 31.7 0.2 8.3 1 1 7 8 8 8 8 Ankyrin repeats (many copies) Ank_5 PF13857.6 gi|452208667|ref|YP_007488781.1| - 1.5e-43 146.2 8.0 6.4e-11 42.3 0.4 5.3 4 1 1 5 5 5 5 Ankyrin repeats (many copies) Ank PF00023.30 gi|452208667|ref|YP_007488781.1| - 7e-43 143.3 11.1 1.4e-05 25.3 0.3 8.0 8 0 0 8 8 8 7 Ankyrin repeat Ank_3 PF13606.6 gi|452208667|ref|YP_007488781.1| - 5.4e-33 109.3 6.4 0.00097 19.4 0.1 9.1 9 0 0 9 9 9 7 Ankyrin repeat DUF3107 PF11305.8 gi|452208667|ref|YP_007488781.1| - 1.2e-05 25.4 8.3 2.4 8.5 0.1 6.3 3 2 4 7 7 7 2 Protein of unknown function (DUF3107) T6PP_N PF18572.1 gi|452208667|ref|YP_007488781.1| - 0.048 13.5 1.1 20 5.1 0.3 3.5 2 1 2 4 4 4 0 Trehalose-6-phosphate phosphatase N-terminal helical bundle domain Attacin_C PF03769.15 gi|452208667|ref|YP_007488781.1| - 0.15 12.3 4.1 6.7 7.0 0.7 3.3 2 1 2 4 4 4 0 Attacin, C-terminal region Macoilin PF09726.9 gi|452208669|ref|YP_007488783.1| - 0.21 10.1 0.1 0.21 10.1 0.1 1.0 1 0 0 1 1 1 0 Macoilin family Aminotran_3 PF00202.21 gi|452208670|ref|YP_007488784.1| - 1.6e-118 395.9 0.0 1.8e-118 395.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aldedh PF00171.22 gi|452208671|ref|YP_007488785.1| - 1.7e-181 603.8 0.0 1.9e-181 603.6 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 gi|452208671|ref|YP_007488785.1| - 0.012 14.6 0.0 0.041 12.9 0.0 1.7 2 0 0 2 2 2 0 Acyl-CoA reductase (LuxC) DUF1487 PF07368.11 gi|452208671|ref|YP_007488785.1| - 0.066 12.6 0.0 2.4 7.6 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1487) Response_reg PF00072.24 gi|452208672|ref|YP_007488786.1| - 5.6e-15 55.5 0.0 6.5e-15 55.3 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain GatB_N PF02934.15 gi|452208673|ref|YP_007488787.1| - 1.3e-67 228.1 0.0 1.7e-67 227.7 0.0 1.1 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.18 gi|452208673|ref|YP_007488787.1| - 3.2e-18 66.0 0.1 6.4e-18 65.0 0.1 1.6 1 0 0 1 1 1 1 GatB domain GAD PF02938.14 gi|452208673|ref|YP_007488787.1| - 1.8e-15 56.9 0.5 1e-14 54.5 0.1 2.3 2 0 0 2 2 2 1 GAD domain YqeY PF09424.10 gi|452208673|ref|YP_007488787.1| - 1.9e-05 24.7 0.1 5.2e-05 23.3 0.1 1.8 1 1 0 1 1 1 1 Yqey-like protein DUF2999 PF11212.8 gi|452208673|ref|YP_007488787.1| - 0.091 13.1 0.1 0.58 10.5 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2999) SnoaL_3 PF13474.6 gi|452208674|ref|YP_007488788.1| - 0.00031 21.0 0.0 0.00031 21.0 0.0 1.1 1 0 0 1 1 1 1 SnoaL-like domain CaMKII_AD PF08332.10 gi|452208674|ref|YP_007488788.1| - 0.033 14.3 0.0 0.036 14.2 0.0 1.1 1 0 0 1 1 1 0 Calcium/calmodulin dependent protein kinase II association domain Usp PF00582.26 gi|452208676|ref|YP_007488790.1| - 3.2e-32 112.0 0.2 3.7e-32 111.8 0.2 1.0 1 0 0 1 1 1 1 Universal stress protein family PGM_PMM_I PF02878.16 gi|452208676|ref|YP_007488790.1| - 0.0022 17.7 0.0 0.0036 17.0 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Fer4_7 PF12838.7 gi|452208677|ref|YP_007488791.1| - 9.3e-29 99.8 67.2 8.6e-11 42.3 8.2 5.4 5 1 0 5 5 5 4 4Fe-4S dicluster domain Fer4 PF00037.27 gi|452208677|ref|YP_007488791.1| - 8.7e-27 91.8 93.0 3.2e-07 29.9 2.5 9.0 10 0 0 10 10 8 8 4Fe-4S binding domain Fer4_10 PF13237.6 gi|452208677|ref|YP_007488791.1| - 3.1e-20 72.0 71.1 3.9e-05 23.7 5.9 7.6 5 2 3 8 8 8 7 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452208677|ref|YP_007488791.1| - 5.1e-20 71.4 69.5 1.2e-06 28.5 6.9 6.6 4 3 4 8 8 7 7 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452208677|ref|YP_007488791.1| - 4.5e-17 62.7 69.4 0.0011 19.8 1.1 8.4 6 3 2 8 8 8 6 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|452208677|ref|YP_007488791.1| - 1.4e-16 60.4 69.5 0.00035 20.6 7.7 7.0 6 1 1 7 7 6 6 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|452208677|ref|YP_007488791.1| - 3.4e-13 49.0 85.2 5.6e-05 23.0 2.3 9.0 9 1 0 9 9 8 8 4Fe-4S binding domain Fer4_2 PF12797.7 gi|452208677|ref|YP_007488791.1| - 2.1e-11 43.2 77.4 0.00026 20.9 1.6 9.2 9 0 0 9 9 9 6 4Fe-4S binding domain Fer4_8 PF13183.6 gi|452208677|ref|YP_007488791.1| - 4.3e-09 36.7 69.8 0.00067 20.1 10.3 6.8 3 2 5 8 8 8 7 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|452208677|ref|YP_007488791.1| - 0.003 18.3 56.0 0.49 11.2 1.3 8.6 8 0 0 8 8 8 5 4Fe-4S single cluster domain Fer4_17 PF13534.6 gi|452208677|ref|YP_007488791.1| - 0.046 14.3 80.3 0.11 13.1 12.0 8.5 3 2 6 9 9 8 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|452208677|ref|YP_007488791.1| - 0.2 12.2 82.7 0.055 14.0 3.9 9.2 9 0 0 9 9 9 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|452208677|ref|YP_007488791.1| - 0.27 12.1 0.2 0.27 12.1 0.2 8.2 8 1 1 10 10 9 0 4Fe-4S dicluster domain FlpD PF02662.16 gi|452208678|ref|YP_007488792.1| - 1.1e-50 170.7 5.4 4.9e-50 168.6 0.1 3.5 4 0 0 4 4 3 1 Methyl-viologen-reducing hydrogenase, delta subunit Pyr_redox_2 PF07992.14 gi|452208678|ref|YP_007488792.1| - 3.1e-16 59.5 0.8 1.9e-15 56.8 0.1 2.5 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_7 PF12838.7 gi|452208678|ref|YP_007488792.1| - 1.4e-14 54.4 41.9 0.00016 22.2 7.8 5.4 4 1 2 6 6 5 5 4Fe-4S dicluster domain Fer4 PF00037.27 gi|452208678|ref|YP_007488792.1| - 9.2e-14 50.6 57.4 1.1e-06 28.1 3.4 6.2 6 1 0 6 6 5 3 4Fe-4S binding domain Fer4_10 PF13237.6 gi|452208678|ref|YP_007488792.1| - 5.4e-13 48.8 36.1 2.6e-05 24.3 0.2 5.3 4 1 1 5 5 5 4 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|452208678|ref|YP_007488792.1| - 1.1e-12 47.9 51.2 2.7e-08 33.8 12.0 6.0 7 0 0 7 7 6 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|452208678|ref|YP_007488792.1| - 2.2e-12 46.5 57.5 6.7e-06 25.9 3.5 6.2 7 0 0 7 7 5 4 4Fe-4S binding domain Fer4_2 PF12797.7 gi|452208678|ref|YP_007488792.1| - 4.7e-10 39.0 54.5 6.3e-06 26.0 2.2 6.2 7 0 0 7 7 6 4 4Fe-4S binding domain Fer4_16 PF13484.6 gi|452208678|ref|YP_007488792.1| - 4.7e-10 40.3 27.4 0.013 16.5 0.1 5.5 5 0 0 5 5 5 3 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|452208678|ref|YP_007488792.1| - 1e-09 38.4 41.1 2.7e-07 30.7 10.8 5.2 4 1 2 6 6 6 4 4Fe-4S dicluster domain Pyr_redox_3 PF13738.6 gi|452208678|ref|YP_007488792.1| - 9.5e-08 31.6 0.0 9.1e-07 28.4 0.0 2.4 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|452208678|ref|YP_007488792.1| - 1e-07 31.9 2.1 1.9e-05 24.4 0.7 2.7 2 1 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox PF00070.27 gi|452208678|ref|YP_007488792.1| - 1e-06 29.2 0.3 2e-05 25.1 0.3 2.6 3 0 0 3 3 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|452208678|ref|YP_007488792.1| - 2.3e-06 27.3 0.2 3.8e-06 26.5 0.2 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|452208678|ref|YP_007488792.1| - 2.5e-06 26.8 0.9 5.2e-06 25.8 0.9 1.5 1 0 0 1 1 1 1 FAD binding domain GIDA PF01134.22 gi|452208678|ref|YP_007488792.1| - 4e-06 26.2 0.4 1.2e-05 24.6 0.3 1.8 2 0 0 2 2 2 1 Glucose inhibited division protein A Fer4_8 PF13183.6 gi|452208678|ref|YP_007488792.1| - 6.1e-06 26.6 28.4 0.022 15.2 0.0 5.4 5 1 0 5 5 4 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|452208678|ref|YP_007488792.1| - 1.8e-05 25.1 31.3 0.0059 17.1 4.5 4.4 4 0 0 4 4 3 3 4Fe-4S dicluster domain NAD_binding_8 PF13450.6 gi|452208678|ref|YP_007488792.1| - 2.1e-05 24.7 0.0 4.9e-05 23.5 0.0 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 gi|452208678|ref|YP_007488792.1| - 0.00018 20.9 0.5 0.00028 20.2 0.5 1.3 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.14 gi|452208678|ref|YP_007488792.1| - 0.00027 19.8 1.5 0.00061 18.6 1.1 1.7 1 1 0 2 2 2 1 HI0933-like protein Thi4 PF01946.17 gi|452208678|ref|YP_007488792.1| - 0.0005 19.4 0.0 0.0011 18.3 0.0 1.5 1 0 0 1 1 1 1 Thi4 family Fer4_4 PF12800.7 gi|452208678|ref|YP_007488792.1| - 0.00066 20.0 34.7 0.036 14.6 4.0 5.4 4 0 0 4 4 4 2 4Fe-4S binding domain Amino_oxidase PF01593.24 gi|452208678|ref|YP_007488792.1| - 0.0021 17.4 0.1 0.021 14.1 0.0 2.1 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase AlaDh_PNT_C PF01262.21 gi|452208678|ref|YP_007488792.1| - 0.0034 16.7 0.2 0.0084 15.4 0.1 1.6 2 0 0 2 2 1 1 Alanine dehydrogenase/PNT, C-terminal domain K_oxygenase PF13434.6 gi|452208678|ref|YP_007488792.1| - 0.0063 15.7 0.2 2.6 7.1 0.0 2.6 3 0 0 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_9 PF13454.6 gi|452208678|ref|YP_007488792.1| - 0.014 15.3 0.1 1.7 8.6 0.0 2.6 2 0 0 2 2 2 0 FAD-NAD(P)-binding NAD_binding_7 PF13241.6 gi|452208678|ref|YP_007488792.1| - 0.022 15.2 0.3 0.17 12.3 0.1 2.6 2 1 0 2 2 2 0 Putative NAD(P)-binding Fer4_13 PF13370.6 gi|452208678|ref|YP_007488792.1| - 0.087 13.4 32.8 0.58 10.7 4.3 4.7 4 0 0 4 4 4 0 4Fe-4S single cluster domain of Ferredoxin I 3HCDH_N PF02737.18 gi|452208678|ref|YP_007488792.1| - 0.094 12.6 0.6 0.21 11.5 0.6 1.6 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Trp_halogenase PF04820.14 gi|452208678|ref|YP_007488792.1| - 0.15 10.9 1.7 0.34 9.7 0.7 1.8 2 0 0 2 2 2 0 Tryptophan halogenase Lycopene_cycl PF05834.12 gi|452208678|ref|YP_007488792.1| - 0.18 10.9 0.9 1.1 8.2 0.4 2.3 3 0 0 3 3 3 0 Lycopene cyclase protein Fer4_15 PF13459.6 gi|452208678|ref|YP_007488792.1| - 0.31 11.8 29.3 0.15 12.8 0.7 4.8 3 1 0 3 3 3 0 4Fe-4S single cluster domain FeThRed_B PF02943.15 gi|452208680|ref|YP_007488794.1| - 2.4e-26 91.8 1.2 2.8e-26 91.6 1.2 1.0 1 0 0 1 1 1 1 Ferredoxin thioredoxin reductase catalytic beta chain FeS PF04060.13 gi|452208682|ref|YP_007488796.1| - 1.4e-13 50.2 3.0 1.4e-13 50.2 3.0 2.3 2 0 0 2 2 2 1 Putative Fe-S cluster Fer4 PF00037.27 gi|452208682|ref|YP_007488796.1| - 2.1e-06 27.3 22.2 9e-06 25.3 3.8 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|452208682|ref|YP_007488796.1| - 6e-05 23.1 14.6 0.00068 19.7 9.5 3.1 2 1 1 3 3 3 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|452208682|ref|YP_007488796.1| - 0.00018 22.0 17.5 0.0055 17.3 3.2 3.0 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|452208682|ref|YP_007488796.1| - 0.00024 21.2 12.3 0.0029 17.7 0.6 3.1 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|452208682|ref|YP_007488796.1| - 0.00063 20.4 3.0 0.0077 17.0 0.1 2.6 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_4 PF12800.7 gi|452208682|ref|YP_007488796.1| - 0.0013 19.1 1.2 0.0013 19.1 1.2 3.7 3 1 0 3 3 3 1 4Fe-4S binding domain Fer4_2 PF12797.7 gi|452208682|ref|YP_007488796.1| - 0.0016 18.5 2.6 0.0016 18.5 2.6 3.4 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_6 PF12837.7 gi|452208682|ref|YP_007488796.1| - 0.002 18.1 3.5 0.002 18.1 3.5 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|452208682|ref|YP_007488796.1| - 0.0028 17.8 17.9 0.0059 16.8 9.0 3.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain YhfH PF14149.6 gi|452208682|ref|YP_007488796.1| - 0.0074 16.2 2.5 0.0074 16.2 2.5 2.2 2 0 0 2 2 1 1 YhfH-like protein Fer4_8 PF13183.6 gi|452208682|ref|YP_007488796.1| - 0.021 15.3 13.8 0.039 14.4 6.9 2.6 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|452208682|ref|YP_007488796.1| - 0.027 15.0 6.7 0.027 15.0 6.7 2.6 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|452208682|ref|YP_007488796.1| - 0.13 13.3 7.4 0.13 13.3 7.4 3.5 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_16 PF13484.6 gi|452208682|ref|YP_007488796.1| - 0.27 12.2 19.9 0.26 12.3 2.3 3.2 2 1 1 3 3 3 0 4Fe-4S double cluster binding domain Fer4_13 PF13370.6 gi|452208682|ref|YP_007488796.1| - 1.3 9.6 14.8 2.6 8.6 8.3 3.2 2 1 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I TPP_enzyme_M PF00205.22 gi|452208683|ref|YP_007488797.1| - 5e-06 26.3 2.8 0.0043 16.8 0.1 3.3 3 1 0 3 3 3 2 Thiamine pyrophosphate enzyme, central domain Cas_GSU0053 PF09617.10 gi|452208683|ref|YP_007488797.1| - 0.0075 16.2 0.0 0.016 15.2 0.0 1.5 1 0 0 1 1 1 1 CRISPR-associated protein GSU0053 (Cas_GSU0053) CO_dh PF02552.16 gi|452208683|ref|YP_007488797.1| - 0.059 13.1 0.0 0.14 12.0 0.0 1.6 1 0 0 1 1 1 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit Molydop_binding PF01568.21 gi|452208684|ref|YP_007488798.1| - 5.9e-14 52.0 0.0 9.2e-14 51.4 0.0 1.3 1 1 0 1 1 1 1 Molydopterin dinucleotide binding domain CDC48_N PF02359.18 gi|452208684|ref|YP_007488798.1| - 0.03 14.5 0.0 0.051 13.7 0.0 1.4 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), N-terminal domain NosD PF05048.13 gi|452208686|ref|YP_007488800.1| - 1e-67 227.9 50.3 1e-48 165.8 26.0 2.3 1 1 1 2 2 2 2 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|452208686|ref|YP_007488800.1| - 5.5e-38 130.3 79.7 1.4e-21 77.0 27.8 2.6 1 1 2 3 3 3 3 Right handed beta helix region PKD PF00801.20 gi|452208686|ref|YP_007488800.1| - 5.7e-07 29.3 0.4 5.7e-07 29.3 0.4 2.0 2 0 0 2 2 2 1 PKD domain PGF-CTERM PF18204.1 gi|452208686|ref|YP_007488800.1| - 0.075 13.0 0.1 0.12 12.4 0.1 1.3 1 0 0 1 1 1 0 PGF-CTERM motif NosD PF05048.13 gi|452208687|ref|YP_007488801.1| - 4.1e-102 340.6 135.8 5.3e-54 183.0 39.0 4.9 1 1 4 5 5 5 5 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|452208687|ref|YP_007488801.1| - 1e-66 223.7 132.3 4.1e-22 78.7 25.5 5.0 2 1 3 5 5 5 4 Right handed beta helix region Pectate_lyase_3 PF12708.7 gi|452208687|ref|YP_007488801.1| - 0.25 11.1 58.8 0.39 10.5 3.3 5.8 2 1 3 6 6 6 0 Pectate lyase superfamily protein NosD PF05048.13 gi|452208688|ref|YP_007488802.1| - 1.9e-81 272.9 154.2 8.8e-41 139.7 49.6 5.8 2 1 4 6 6 6 5 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|452208688|ref|YP_007488802.1| - 1.3e-49 168.0 166.1 5.7e-19 68.5 42.9 5.5 2 1 4 6 6 6 4 Right handed beta helix region PKD PF00801.20 gi|452208688|ref|YP_007488802.1| - 6.3e-19 67.6 12.7 5.5e-12 45.4 2.2 2.8 2 0 0 2 2 2 2 PKD domain PKD_3 PF16820.5 gi|452208688|ref|YP_007488802.1| - 0.00042 20.0 5.6 0.056 13.2 0.1 3.2 3 0 0 3 3 3 2 PKD-like domain PGF-CTERM PF18204.1 gi|452208688|ref|YP_007488802.1| - 0.013 15.5 0.0 0.022 14.7 0.0 1.4 1 0 0 1 1 1 0 PGF-CTERM motif Hist_deacetyl PF00850.19 gi|452208689|ref|YP_007488803.1| - 1.5e-63 215.1 0.0 2.4e-63 214.5 0.0 1.2 1 0 0 1 1 1 1 Histone deacetylase domain zf-TFIIB PF13453.6 gi|452208689|ref|YP_007488803.1| - 0.2 11.0 0.7 4.9 6.6 0.1 2.4 2 0 0 2 2 2 0 Transcription factor zinc-finger Hydantoinase_A PF01968.18 gi|452208690|ref|YP_007488804.1| - 5e-50 170.4 5.5 3.8e-45 154.4 2.5 2.3 2 0 0 2 2 2 2 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 gi|452208690|ref|YP_007488804.1| - 3.2e-34 118.2 1.4 4.1e-30 104.8 0.2 3.5 2 1 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.6 gi|452208690|ref|YP_007488804.1| - 1.1e-05 24.2 0.2 0.026 13.1 0.0 2.3 2 0 0 2 2 2 2 MutL protein FtsA PF14450.6 gi|452208690|ref|YP_007488804.1| - 0.0001 22.7 3.5 0.18 12.2 0.0 3.2 3 0 0 3 3 3 2 Cell division protein FtsA MreB_Mbl PF06723.13 gi|452208690|ref|YP_007488804.1| - 0.00063 18.7 1.9 0.006 15.4 0.3 2.7 2 0 0 2 2 2 1 MreB/Mbl protein BcrAD_BadFG PF01869.20 gi|452208690|ref|YP_007488804.1| - 0.0027 17.3 8.6 0.045 13.2 4.3 3.8 2 1 0 2 2 2 1 BadF/BadG/BcrA/BcrD ATPase family EutA PF06277.11 gi|452208690|ref|YP_007488804.1| - 0.0066 15.4 2.4 1.8 7.3 0.0 2.8 3 0 0 3 3 3 2 Ethanolamine utilisation protein EutA DDR PF08841.10 gi|452208690|ref|YP_007488804.1| - 0.0067 15.5 1.3 0.053 12.5 0.3 2.3 2 0 0 2 2 2 1 Diol dehydratase reactivase ATPase-like domain Ppx-GppA PF02541.16 gi|452208690|ref|YP_007488804.1| - 0.0094 15.4 1.9 0.084 12.3 0.1 2.6 3 0 0 3 3 3 1 Ppx/GppA phosphatase family StbA PF06406.11 gi|452208690|ref|YP_007488804.1| - 0.015 14.6 1.3 0.55 9.4 0.0 3.1 3 0 0 3 3 3 0 StbA protein SBF PF01758.16 gi|452208692|ref|YP_007488806.1| - 7.4e-40 136.7 16.3 1.3e-39 135.9 16.3 1.3 1 0 0 1 1 1 1 Sodium Bile acid symporter family SBF_like PF13593.6 gi|452208692|ref|YP_007488806.1| - 8.1e-17 61.5 19.5 3.3e-16 59.5 19.5 1.8 1 1 0 1 1 1 1 SBF-like CPA transporter family (DUF4137) Mem_trans PF03547.18 gi|452208692|ref|YP_007488806.1| - 0.71 8.2 17.7 0.048 12.1 7.6 2.7 1 1 2 3 3 3 0 Membrane transport protein S4 PF01479.25 gi|452208693|ref|YP_007488807.1| - 1.3e-12 47.2 0.1 3.7e-12 45.7 0.1 1.8 1 0 0 1 1 1 1 S4 domain FtsJ PF01728.19 gi|452208693|ref|YP_007488807.1| - 3.8e-08 33.7 0.0 6.4e-08 32.9 0.0 1.6 1 1 0 1 1 1 1 FtsJ-like methyltransferase Fibrillarin PF01269.17 gi|452208693|ref|YP_007488807.1| - 3e-07 29.8 0.0 4.1e-07 29.3 0.0 1.2 1 0 0 1 1 1 1 Fibrillarin Methyltransf_25 PF13649.6 gi|452208693|ref|YP_007488807.1| - 9.5e-07 29.4 0.0 1.6e-06 28.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|452208693|ref|YP_007488807.1| - 1e-06 28.6 0.0 2.1e-06 27.6 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|452208693|ref|YP_007488807.1| - 3.7e-05 24.3 0.0 9.8e-05 22.9 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain S4_2 PF13275.6 gi|452208693|ref|YP_007488807.1| - 0.00029 20.6 0.1 0.0006 19.6 0.1 1.5 1 0 0 1 1 1 1 S4 domain Methyltransf_23 PF13489.6 gi|452208693|ref|YP_007488807.1| - 0.002 18.0 0.0 0.0029 17.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_24 PF13578.6 gi|452208693|ref|YP_007488807.1| - 0.0024 18.9 0.0 0.0041 18.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain TPMT PF05724.11 gi|452208693|ref|YP_007488807.1| - 0.2 11.3 0.0 0.27 10.8 0.0 1.3 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) DUF2119 PF09892.9 gi|452208694|ref|YP_007488808.1| - 4.5e-69 231.6 0.0 5.1e-69 231.4 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2119) Cpn60_TCP1 PF00118.24 gi|452208695|ref|YP_007488809.1| - 1.6e-157 525.1 16.0 1.8e-157 524.9 16.0 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family GARS_A PF01071.19 gi|452208695|ref|YP_007488809.1| - 0.023 14.5 0.8 0.12 12.1 0.3 2.2 1 1 1 2 2 2 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Alba PF01918.21 gi|452208695|ref|YP_007488809.1| - 0.095 12.5 0.6 0.45 10.4 0.1 2.5 2 0 0 2 2 2 0 Alba Rib_5-P_isom_A PF06026.14 gi|452208697|ref|YP_007488811.1| - 3.4e-62 209.1 0.1 4.9e-62 208.6 0.1 1.2 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DeoRC PF00455.22 gi|452208697|ref|YP_007488811.1| - 4e-06 26.9 0.6 0.00089 19.2 0.0 2.2 1 1 0 2 2 2 2 DeoR C terminal sensor domain Dppa2_A PF14049.6 gi|452208697|ref|YP_007488811.1| - 0.044 13.9 0.1 0.17 12.0 0.0 1.9 2 0 0 2 2 2 0 Dppa2/4 conserved region in higher vertebrates Sugar-bind PF04198.13 gi|452208697|ref|YP_007488811.1| - 0.089 11.9 0.1 0.14 11.3 0.1 1.3 1 0 0 1 1 1 0 Putative sugar-binding domain DUF2478 PF10649.9 gi|452208697|ref|YP_007488811.1| - 0.15 11.7 0.1 0.32 10.6 0.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2478) tRNA-synt_2 PF00152.20 gi|452208698|ref|YP_007488812.1| - 8.5e-90 301.0 0.2 1e-89 300.7 0.2 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 gi|452208698|ref|YP_007488812.1| - 1.2e-14 54.1 0.2 2.2e-14 53.2 0.2 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 gi|452208698|ref|YP_007488812.1| - 0.00021 20.9 1.0 0.033 13.7 0.0 3.0 3 0 0 3 3 3 1 tRNA synthetases class II core domain (F) Med30 PF11315.8 gi|452208698|ref|YP_007488812.1| - 0.069 13.3 0.0 0.15 12.2 0.0 1.6 1 0 0 1 1 1 0 Mediator complex subunit 30 Cupredoxin_1 PF13473.6 gi|452208699|ref|YP_007488813.1| - 6.6e-10 39.0 0.0 1e-09 38.5 0.0 1.2 1 0 0 1 1 1 1 Cupredoxin-like domain Copper-bind PF00127.20 gi|452208699|ref|YP_007488813.1| - 1.8e-09 38.0 0.8 1.3e-08 35.2 0.8 2.0 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Metallophos PF00149.28 gi|452208701|ref|YP_007488815.1| - 1.3e-11 45.4 0.8 1.9e-11 44.8 0.8 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|452208701|ref|YP_007488815.1| - 1.2e-10 41.9 0.1 2e-10 41.1 0.1 1.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos_3 PF14582.6 gi|452208701|ref|YP_007488815.1| - 0.00016 21.1 0.1 0.43 9.9 0.0 2.5 2 1 0 2 2 2 2 Metallophosphoesterase, calcineurin superfamily Flavodoxin_1 PF00258.25 gi|452208701|ref|YP_007488815.1| - 0.15 12.3 0.0 0.25 11.5 0.0 1.5 1 1 0 1 1 1 0 Flavodoxin Pribosyltran PF00156.27 gi|452208702|ref|YP_007488816.1| - 3.3e-10 39.7 0.0 4.9e-10 39.1 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Amidohydro_3 PF07969.11 gi|452208703|ref|YP_007488817.1| - 0.28 10.6 2.5 0.15 11.5 0.8 1.4 2 0 0 2 2 2 0 Amidohydrolase family DUF711 PF05167.12 gi|452208706|ref|YP_007488820.1| - 1.4e-179 597.3 9.1 1.7e-179 597.0 9.1 1.0 1 0 0 1 1 1 1 Uncharacterised ACR (DUF711) ACT_6 PF13740.6 gi|452208707|ref|YP_007488821.1| - 8.7e-17 60.9 0.2 9.9e-17 60.7 0.2 1.0 1 0 0 1 1 1 1 ACT domain ACT PF01842.25 gi|452208707|ref|YP_007488821.1| - 3.5e-09 36.3 0.4 4.7e-09 35.9 0.4 1.2 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.6 gi|452208707|ref|YP_007488821.1| - 1.9e-05 25.2 1.0 3e-05 24.5 0.8 1.4 2 0 0 2 2 2 1 ACT domain ACT_7 PF13840.6 gi|452208707|ref|YP_007488821.1| - 0.0091 15.8 0.8 0.013 15.2 0.8 1.3 1 0 0 1 1 1 1 ACT domain SKI PF01202.22 gi|452208708|ref|YP_007488822.1| - 8.8e-30 103.9 0.0 1e-29 103.7 0.0 1.0 1 0 0 1 1 1 1 Shikimate kinase Cytidylate_kin2 PF13189.6 gi|452208708|ref|YP_007488822.1| - 2.6e-06 27.7 0.1 5.7e-06 26.6 0.1 1.8 1 1 0 1 1 1 1 Cytidylate kinase-like family AAA_18 PF13238.6 gi|452208708|ref|YP_007488822.1| - 5.8e-06 26.9 0.0 1.4e-05 25.7 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|452208708|ref|YP_007488822.1| - 1.6e-05 25.1 0.0 2e-05 24.8 0.0 1.3 1 1 0 1 1 1 1 AAA domain Cytidylate_kin PF02224.18 gi|452208708|ref|YP_007488822.1| - 4.2e-05 23.4 0.2 0.00013 21.8 0.0 1.7 1 1 0 2 2 2 1 Cytidylate kinase AAA PF00004.29 gi|452208708|ref|YP_007488822.1| - 0.011 16.2 0.0 0.021 15.2 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) dNK PF01712.19 gi|452208708|ref|YP_007488822.1| - 0.013 15.4 0.0 0.23 11.3 0.0 2.0 2 0 0 2 2 2 0 Deoxynucleoside kinase AAA_17 PF13207.6 gi|452208708|ref|YP_007488822.1| - 0.016 15.6 0.0 0.048 14.1 0.0 1.8 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 gi|452208708|ref|YP_007488822.1| - 0.017 15.6 0.0 0.029 14.9 0.0 1.4 1 0 0 1 1 1 0 ABC transporter APS_kinase PF01583.20 gi|452208708|ref|YP_007488822.1| - 0.034 14.0 0.0 0.058 13.3 0.0 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_2 PF07724.14 gi|452208708|ref|YP_007488822.1| - 0.046 13.8 0.0 0.063 13.4 0.0 1.2 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) ATP_bind_2 PF03668.15 gi|452208708|ref|YP_007488822.1| - 0.046 13.0 0.2 0.13 11.5 0.2 1.6 1 1 0 1 1 1 0 P-loop ATPase protein family AAA_22 PF13401.6 gi|452208708|ref|YP_007488822.1| - 0.091 13.0 0.0 0.2 11.9 0.0 1.6 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 gi|452208708|ref|YP_007488822.1| - 0.1 11.8 0.1 0.15 11.2 0.1 1.2 1 0 0 1 1 1 0 NB-ARC domain AAA_16 PF13191.6 gi|452208708|ref|YP_007488822.1| - 0.11 12.9 0.1 0.12 12.7 0.1 1.4 1 1 0 1 1 1 0 AAA ATPase domain CoaE PF01121.20 gi|452208708|ref|YP_007488822.1| - 0.12 12.0 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 Dephospho-CoA kinase Rad17 PF03215.15 gi|452208708|ref|YP_007488822.1| - 0.13 12.2 0.0 0.5 10.2 0.0 1.8 1 1 0 1 1 1 0 Rad17 P-loop domain AAA_28 PF13521.6 gi|452208708|ref|YP_007488822.1| - 0.15 12.3 0.0 0.24 11.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain Trm56 PF01994.16 gi|452208710|ref|YP_007488824.1| - 2.1e-36 124.4 0.0 3.6e-36 123.7 0.0 1.4 1 1 0 1 1 1 1 tRNA ribose 2'-O-methyltransferase, aTrm56 SPOUT_MTase_2 PF14419.6 gi|452208710|ref|YP_007488824.1| - 0.16 11.3 0.0 0.24 10.8 0.0 1.2 1 0 0 1 1 1 0 AF2226-like SPOUT RNA Methylase fused to THUMP Glycos_transf_3 PF00591.21 gi|452208711|ref|YP_007488825.1| - 1.4e-15 57.6 0.2 9.3e-15 54.9 0.2 2.0 1 1 0 1 1 1 1 Glycosyl transferase family, a/b domain PYNP_C PF07831.13 gi|452208711|ref|YP_007488825.1| - 4.5e-15 55.1 0.1 1.1e-14 53.8 0.1 1.7 1 0 0 1 1 1 1 Pyrimidine nucleoside phosphorylase C-terminal domain Glycos_trans_3N PF02885.17 gi|452208711|ref|YP_007488825.1| - 2.8e-13 49.5 0.0 6.3e-13 48.4 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferase family, helical bundle domain Molydop_binding PF01568.21 gi|452208711|ref|YP_007488825.1| - 0.00078 19.4 0.0 0.0025 17.8 0.0 1.8 2 0 0 2 2 2 1 Molydopterin dinucleotide binding domain Biotin_lipoyl PF00364.22 gi|452208711|ref|YP_007488825.1| - 0.01 15.6 0.1 0.064 13.1 0.1 2.4 1 0 0 1 1 1 0 Biotin-requiring enzyme DUF2254 PF10011.9 gi|452208711|ref|YP_007488825.1| - 0.01 14.7 0.0 0.015 14.1 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) CDC48_N PF02359.18 gi|452208711|ref|YP_007488825.1| - 0.025 14.8 0.0 0.063 13.5 0.0 1.6 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), N-terminal domain Biotin_lipoyl_2 PF13533.6 gi|452208711|ref|YP_007488825.1| - 0.034 14.0 0.3 0.12 12.3 0.1 2.0 2 0 0 2 2 2 0 Biotin-lipoyl like Muted PF14942.6 gi|452208711|ref|YP_007488825.1| - 0.13 12.6 0.0 0.32 11.3 0.0 1.5 1 0 0 1 1 1 0 Organelle biogenesis, Muted-like protein EamA PF00892.20 gi|452208712|ref|YP_007488826.1| - 2.7e-45 153.9 39.4 2e-26 92.8 16.1 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 gi|452208712|ref|YP_007488826.1| - 1.1e-08 34.8 12.3 1.7e-07 30.9 12.4 2.0 1 1 0 1 1 1 1 Triose-phosphate Transporter family TMEM234 PF10639.9 gi|452208712|ref|YP_007488826.1| - 0.064 13.3 8.0 0.91 9.6 0.5 2.6 2 1 0 2 2 2 0 Putative transmembrane family 234 Phage_holin_5_2 PF16079.5 gi|452208713|ref|YP_007488827.1| - 0.00045 20.5 2.9 0.00054 20.2 2.9 1.1 1 0 0 1 1 1 1 Phage holin family Hol44, in holin superfamily V Peptidase_A22B PF04258.13 gi|452208713|ref|YP_007488827.1| - 0.0025 17.4 1.2 0.0025 17.4 1.2 1.0 1 0 0 1 1 1 1 Signal peptide peptidase Phage_holin_3_6 PF07332.11 gi|452208713|ref|YP_007488827.1| - 0.013 15.5 3.4 0.014 15.4 3.4 1.0 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Arteri_Gl PF00951.18 gi|452208713|ref|YP_007488827.1| - 0.016 15.0 1.7 0.016 15.0 1.7 1.0 1 0 0 1 1 1 0 Arterivirus GL envelope glycoprotein DUF2975 PF11188.8 gi|452208713|ref|YP_007488827.1| - 0.036 13.9 5.4 0.043 13.7 5.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) DUF2512 PF10710.9 gi|452208713|ref|YP_007488827.1| - 0.04 13.6 4.9 0.047 13.4 4.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2512) MgtE PF01769.16 gi|452208713|ref|YP_007488827.1| - 0.041 14.3 3.4 0.041 14.3 3.4 1.0 1 0 0 1 1 1 0 Divalent cation transporter HlyIII PF03006.20 gi|452208713|ref|YP_007488827.1| - 0.057 13.1 3.1 0.062 13.0 3.1 1.0 1 0 0 1 1 1 0 Haemolysin-III related DGF-1_5 PF11038.8 gi|452208713|ref|YP_007488827.1| - 0.067 12.5 0.3 0.063 12.6 0.3 1.1 1 0 0 1 1 1 0 Dispersed gene family protein 1 of Trypanosoma cruzi region 5 RseC_MucC PF04246.12 gi|452208713|ref|YP_007488827.1| - 0.11 12.5 3.3 0.12 12.3 3.3 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC Otopetrin PF03189.13 gi|452208713|ref|YP_007488827.1| - 0.12 11.2 3.4 0.12 11.2 3.4 1.0 1 0 0 1 1 1 0 Otopetrin DUF2207 PF09972.9 gi|452208713|ref|YP_007488827.1| - 0.37 9.5 3.3 0.4 9.4 3.3 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF4064 PF13273.6 gi|452208713|ref|YP_007488827.1| - 1.6 9.1 12.0 30 4.9 12.0 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF4064) TM_helix PF05552.12 gi|452208713|ref|YP_007488827.1| - 8.9 6.4 11.9 0.38 10.8 2.7 2.2 2 0 0 2 2 2 0 Conserved TM helix MacB_PCD PF12704.7 gi|452208715|ref|YP_007488829.1| - 6.8e-17 62.5 0.5 6.8e-17 62.5 0.5 1.8 2 0 0 2 2 2 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|452208715|ref|YP_007488829.1| - 1.3e-09 38.4 6.3 1.3e-09 38.4 6.3 2.6 3 0 0 3 3 3 1 FtsX-like permease family TcfC PF16967.5 gi|452208716|ref|YP_007488830.1| - 0.0035 16.8 0.0 2.6 7.6 0.0 3.7 3 1 1 4 4 4 1 E-set like domain DUF3324 PF11797.8 gi|452208716|ref|YP_007488830.1| - 0.026 14.5 0.1 0.93 9.5 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function C-terminal (DUF3324) BsuPI PF12690.7 gi|452208716|ref|YP_007488830.1| - 0.037 14.0 0.1 4.7 7.3 0.0 2.6 2 0 0 2 2 2 0 Intracellular proteinase inhibitor Glyco_hydro_2 PF00703.21 gi|452208716|ref|YP_007488830.1| - 0.059 14.0 0.5 1.9 9.2 0.1 2.7 2 1 0 2 2 2 0 Glycosyl hydrolases family 2 GATase_3 PF07685.14 gi|452208717|ref|YP_007488831.1| - 3.2e-51 173.7 0.0 5.1e-51 173.1 0.0 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.23 gi|452208717|ref|YP_007488831.1| - 3.6e-20 72.3 0.0 6.1e-20 71.6 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.6 gi|452208717|ref|YP_007488831.1| - 3.2e-19 69.6 0.1 3.2e-18 66.3 0.1 2.1 1 1 0 1 1 1 1 AAA domain GATase PF00117.28 gi|452208717|ref|YP_007488831.1| - 2.3e-05 24.2 0.0 4.6e-05 23.3 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase class-I SNO PF01174.19 gi|452208717|ref|YP_007488831.1| - 0.0047 16.8 0.0 0.0089 15.9 0.0 1.5 1 0 0 1 1 1 1 SNO glutamine amidotransferase family OCD_Mu_crystall PF02423.15 gi|452208718|ref|YP_007488832.1| - 1.4e-113 379.0 0.1 1.6e-113 378.9 0.1 1.0 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family Shikimate_DH PF01488.20 gi|452208718|ref|YP_007488832.1| - 1.4e-07 31.7 0.0 2.6e-07 30.8 0.0 1.4 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 gi|452208718|ref|YP_007488832.1| - 0.026 15.1 0.0 0.054 14.1 0.0 1.6 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent THF_DHG_CYH_C PF02882.19 gi|452208718|ref|YP_007488832.1| - 0.053 12.8 0.1 0.099 12.0 0.1 1.4 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DUF5616 PF18481.1 gi|452208719|ref|YP_007488833.1| - 9.3e-47 158.9 0.0 1.2e-46 158.5 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5616) DUF434 PF04256.12 gi|452208719|ref|YP_007488833.1| - 8.8e-17 60.5 0.0 1.8e-16 59.6 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF434) DUF4219 PF13961.6 gi|452208720|ref|YP_007488834.1| - 0.00055 19.5 3.7 0.0016 18.1 3.7 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF4219) Metallophos PF00149.28 gi|452208721|ref|YP_007488835.1| - 2.6e-20 73.8 0.9 6.8e-20 72.4 0.9 1.6 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|452208721|ref|YP_007488835.1| - 0.0077 16.4 0.0 0.013 15.7 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain TPR_2 PF07719.17 gi|452208722|ref|YP_007488836.1| - 7.3e-40 131.9 36.7 2.2e-06 27.4 1.1 9.4 10 0 0 10 10 10 8 Tetratricopeptide repeat TPR_17 PF13431.6 gi|452208722|ref|YP_007488836.1| - 2.6e-37 124.5 18.8 3.7e-05 23.8 0.0 9.2 10 0 0 10 10 9 8 Tetratricopeptide repeat TPR_8 PF13181.6 gi|452208722|ref|YP_007488836.1| - 4.1e-36 120.2 16.8 4.4e-05 23.3 0.6 8.9 9 0 0 9 9 8 7 Tetratricopeptide repeat TPR_11 PF13414.6 gi|452208722|ref|YP_007488836.1| - 3.8e-33 112.9 24.7 1.5e-06 27.7 0.3 8.7 4 3 5 9 9 9 7 TPR repeat TPR_19 PF14559.6 gi|452208722|ref|YP_007488836.1| - 2.5e-28 98.3 19.4 2.4e-07 31.2 1.2 5.8 3 2 3 6 6 6 5 Tetratricopeptide repeat TPR_16 PF13432.6 gi|452208722|ref|YP_007488836.1| - 3.7e-27 94.7 25.7 5.5e-08 33.3 1.5 5.5 5 1 1 6 6 6 5 Tetratricopeptide repeat TPR_1 PF00515.28 gi|452208722|ref|YP_007488836.1| - 1.8e-26 90.8 26.5 8.2e-05 22.3 1.0 8.7 9 0 0 9 9 9 8 Tetratricopeptide repeat TPR_14 PF13428.6 gi|452208722|ref|YP_007488836.1| - 1.1e-25 88.1 21.7 0.0012 19.4 0.3 9.0 1 1 8 9 9 9 8 Tetratricopeptide repeat TPR_12 PF13424.6 gi|452208722|ref|YP_007488836.1| - 2.8e-19 69.2 26.8 1.4e-06 28.5 2.5 6.7 5 3 2 7 7 6 5 Tetratricopeptide repeat TPR_10 PF13374.6 gi|452208722|ref|YP_007488836.1| - 8.6e-12 44.5 29.3 0.032 14.1 0.1 7.8 8 0 0 8 8 8 5 Tetratricopeptide repeat TPR_15 PF13429.6 gi|452208722|ref|YP_007488836.1| - 3.5e-11 42.9 3.0 5.4e-05 22.6 0.1 3.5 1 1 1 3 3 3 3 Tetratricopeptide repeat TPR_7 PF13176.6 gi|452208722|ref|YP_007488836.1| - 2.6e-10 39.6 22.9 0.22 11.6 0.0 8.6 10 0 0 10 10 9 4 Tetratricopeptide repeat TPR_4 PF07721.14 gi|452208722|ref|YP_007488836.1| - 9.7e-10 38.1 6.9 0.37 11.5 0.5 6.9 6 0 0 6 6 6 1 Tetratricopeptide repeat TPR_9 PF13371.6 gi|452208722|ref|YP_007488836.1| - 6.4e-09 35.8 8.5 0.082 13.1 0.1 4.6 1 1 3 5 5 5 3 Tetratricopeptide repeat SHNi-TPR PF10516.9 gi|452208722|ref|YP_007488836.1| - 4.3e-05 22.9 0.5 0.34 10.4 0.0 3.2 3 0 0 3 3 3 2 SHNi-TPR DUF627 PF04781.12 gi|452208722|ref|YP_007488836.1| - 9.9e-05 22.3 6.3 1 9.4 0.2 4.9 3 2 2 5 5 5 1 Protein of unknown function (DUF627) TPR_20 PF14561.6 gi|452208722|ref|YP_007488836.1| - 0.00015 22.1 4.7 0.13 12.6 0.1 3.6 1 1 3 4 4 4 2 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|452208722|ref|YP_007488836.1| - 0.00025 21.2 15.3 0.79 10.0 0.6 4.9 1 1 3 5 5 5 2 Anaphase-promoting complex, cyclosome, subunit 3 BTAD PF03704.17 gi|452208722|ref|YP_007488836.1| - 0.0039 17.6 15.9 0.72 10.3 1.9 4.2 2 2 2 4 4 4 2 Bacterial transcriptional activator domain Coatomer_E PF04733.14 gi|452208722|ref|YP_007488836.1| - 0.004 16.6 4.6 0.023 14.1 0.0 3.4 4 1 1 5 5 5 1 Coatomer epsilon subunit TPR_21 PF09976.9 gi|452208722|ref|YP_007488836.1| - 0.0058 16.4 7.2 11 5.7 0.0 5.7 3 1 2 6 6 6 0 Tetratricopeptide repeat-like domain NARP1 PF12569.8 gi|452208722|ref|YP_007488836.1| - 0.042 12.8 10.9 1.5 7.7 0.3 4.1 1 1 4 5 5 5 0 NMDA receptor-regulated protein 1 TPR_6 PF13174.6 gi|452208722|ref|YP_007488836.1| - 0.047 14.3 12.1 38 5.2 0.0 6.7 7 0 0 7 7 6 0 Tetratricopeptide repeat RAM PF15320.6 gi|452208722|ref|YP_007488836.1| - 0.055 14.1 0.6 12 6.6 0.1 2.8 2 2 0 2 2 2 0 mRNA cap methylation, RNMT-activating mini protein SLT_L PF14718.6 gi|452208722|ref|YP_007488836.1| - 0.16 12.1 5.0 9.1 6.5 0.0 4.6 5 0 0 5 5 5 0 Soluble lytic murein transglycosylase L domain OB_Dis3 PF17849.1 gi|452208722|ref|YP_007488836.1| - 0.18 11.8 0.0 5.9 7.0 0.0 2.8 3 0 0 3 3 3 0 Dis3-like cold-shock domain 2 (CSD2) TPR_3 PF07720.12 gi|452208722|ref|YP_007488836.1| - 4.2 7.5 7.4 6.4 6.9 0.0 4.4 5 0 0 5 5 5 0 Tetratricopeptide repeat SpoVAC_SpoVAEB PF03862.13 gi|452208723|ref|YP_007488837.1| - 0.029 14.7 2.1 0.04 14.2 2.1 1.2 1 0 0 1 1 1 0 SpoVAC/SpoVAEB sporulation membrane protein Romo1 PF10247.9 gi|452208723|ref|YP_007488837.1| - 9.9 6.6 14.6 1.3 9.4 7.4 2.1 1 1 1 2 2 2 0 Reactive mitochondrial oxygen species modulator 1 FxsA PF04186.13 gi|452208725|ref|YP_007488839.1| - 4.2e-33 113.7 5.8 5.4e-33 113.4 5.8 1.1 1 0 0 1 1 1 1 FxsA cytoplasmic membrane protein LrgB PF04172.16 gi|452208726|ref|YP_007488840.1| - 1.1e-76 257.1 15.1 1.3e-76 256.9 15.1 1.0 1 0 0 1 1 1 1 LrgB-like family CbtA PF09490.10 gi|452208726|ref|YP_007488840.1| - 0.023 14.4 0.5 0.023 14.4 0.5 2.6 4 0 0 4 4 4 0 Probable cobalt transporter subunit (CbtA) Hemocyanin_N PF03722.14 gi|452208726|ref|YP_007488840.1| - 0.056 14.0 0.0 0.089 13.3 0.0 1.2 1 0 0 1 1 1 0 Hemocyanin, all-alpha domain Phage_holin_5_2 PF16079.5 gi|452208726|ref|YP_007488840.1| - 0.79 10.1 14.0 2 8.8 1.3 3.7 1 1 1 3 3 3 0 Phage holin family Hol44, in holin superfamily V LrgA PF03788.14 gi|452208727|ref|YP_007488841.1| - 6.2e-29 99.8 6.9 7.5e-29 99.5 6.9 1.1 1 0 0 1 1 1 1 LrgA family Aminotran_5 PF00266.19 gi|452208728|ref|YP_007488842.1| - 1.4e-82 277.6 0.0 1.9e-82 277.2 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|452208728|ref|YP_007488842.1| - 2.1e-08 33.8 0.0 3.2e-08 33.2 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 gi|452208728|ref|YP_007488842.1| - 1.6e-05 24.4 0.0 2.2e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Pyridoxal_deC PF00282.19 gi|452208728|ref|YP_007488842.1| - 0.011 14.5 0.0 0.017 13.9 0.0 1.2 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase conserved domain NifU_N PF01592.16 gi|452208729|ref|YP_007488843.1| - 7.1e-43 145.8 0.1 7.9e-43 145.7 0.1 1.0 1 0 0 1 1 1 1 NifU-like N terminal domain CO_deh_flav_C PF03450.17 gi|452208729|ref|YP_007488843.1| - 0.0067 16.6 0.1 0.01 16.0 0.1 1.4 1 1 0 1 1 1 1 CO dehydrogenase flavoprotein C-terminal domain RimK PF08443.11 gi|452208730|ref|YP_007488844.1| - 1.8e-20 73.3 0.0 2e-18 66.7 0.0 2.5 2 1 0 2 2 2 1 RimK-like ATP-grasp domain GSH-S_ATP PF02955.16 gi|452208730|ref|YP_007488844.1| - 9.2e-15 54.5 0.0 2e-14 53.4 0.0 1.5 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain Rimk_N PF18030.1 gi|452208730|ref|YP_007488844.1| - 1.5e-08 34.9 0.0 2.7e-08 34.1 0.0 1.4 1 0 0 1 1 1 1 RimK PreATP-grasp domain ATPgrasp_YheCD PF14398.6 gi|452208730|ref|YP_007488844.1| - 6e-08 32.3 0.0 3.7e-07 29.6 0.0 2.2 1 1 0 1 1 1 1 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 gi|452208730|ref|YP_007488844.1| - 1.8e-05 24.1 0.1 0.00045 19.6 0.0 2.7 2 2 1 3 3 3 1 Sugar-transfer associated ATP-grasp ATP-grasp_3 PF02655.14 gi|452208730|ref|YP_007488844.1| - 0.00013 22.1 0.0 0.00023 21.3 0.0 1.4 1 1 0 1 1 1 1 ATP-grasp domain ATP-grasp PF02222.22 gi|452208730|ref|YP_007488844.1| - 0.023 14.3 0.0 0.1 12.2 0.0 1.9 1 1 1 2 2 2 0 ATP-grasp domain ATP-grasp_5 PF13549.6 gi|452208730|ref|YP_007488844.1| - 0.031 13.7 0.1 0.12 11.8 0.1 1.8 1 1 1 2 2 2 0 ATP-grasp domain PTH2 PF01981.16 gi|452208731|ref|YP_007488845.1| - 6.9e-29 100.5 0.3 1.6e-27 96.1 0.1 1.9 1 1 1 2 2 2 2 Peptidyl-tRNA hydrolase PTH2 SAP PF02037.27 gi|452208731|ref|YP_007488845.1| - 0.018 14.8 0.4 1.4 8.8 0.1 2.7 2 0 0 2 2 2 0 SAP domain Transglut_core PF01841.19 gi|452208732|ref|YP_007488846.1| - 2.2e-06 28.1 0.0 4.5e-06 27.1 0.0 1.6 1 0 0 1 1 1 1 Transglutaminase-like superfamily FTZ PF03867.14 gi|452208732|ref|YP_007488846.1| - 0.019 14.5 0.5 0.03 13.8 0.5 1.2 1 0 0 1 1 1 0 Fushi tarazu (FTZ), N-terminal region TruD PF01142.18 gi|452208733|ref|YP_007488847.1| - 5.1e-161 536.1 0.0 5.8e-161 536.0 0.0 1.0 1 0 0 1 1 1 1 tRNA pseudouridine synthase D (TruD) MatE PF01554.18 gi|452208734|ref|YP_007488848.1| - 6.3e-33 113.7 42.5 8.3e-21 74.3 15.1 2.7 3 0 0 3 3 3 2 MatE Polysacc_synt_C PF14667.6 gi|452208734|ref|YP_007488848.1| - 1.3e-11 44.8 31.5 1.1e-09 38.5 17.0 4.3 2 1 3 5 5 5 2 Polysaccharide biosynthesis C-terminal domain MarR PF01047.22 gi|452208735|ref|YP_007488849.1| - 1.6e-12 47.2 0.0 3.6e-12 46.0 0.0 1.6 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.6 gi|452208735|ref|YP_007488849.1| - 1.4e-11 44.7 0.0 2.7e-11 43.8 0.0 1.5 2 0 0 2 2 2 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|452208735|ref|YP_007488849.1| - 2.3e-10 40.2 0.0 3.1e-10 39.8 0.0 1.2 1 0 0 1 1 1 1 MarR family Fe_dep_repress PF01325.19 gi|452208735|ref|YP_007488849.1| - 1.5e-08 34.7 0.1 3.1e-08 33.7 0.1 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain TrmB PF01978.19 gi|452208735|ref|YP_007488849.1| - 4.1e-05 23.4 0.1 8.9e-05 22.3 0.0 1.6 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|452208735|ref|YP_007488849.1| - 0.0003 20.5 0.0 0.00051 19.8 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain Rrf2 PF02082.20 gi|452208735|ref|YP_007488849.1| - 0.0022 18.3 0.0 0.0044 17.3 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator HTH_24 PF13412.6 gi|452208735|ref|YP_007488849.1| - 0.003 17.1 0.0 0.0061 16.1 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 gi|452208735|ref|YP_007488849.1| - 0.0057 16.6 0.2 0.014 15.3 0.0 1.8 2 1 0 2 2 2 1 Crp-like helix-turn-helix domain SMC_ScpB PF04079.16 gi|452208735|ref|YP_007488849.1| - 0.008 15.8 0.0 0.018 14.7 0.0 1.5 1 1 0 1 1 1 1 Segregation and condensation complex subunit ScpB HTH_5 PF01022.20 gi|452208735|ref|YP_007488849.1| - 0.013 15.3 0.0 0.023 14.6 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_10 PF04967.12 gi|452208735|ref|YP_007488849.1| - 0.041 13.7 0.3 0.19 11.5 0.0 2.3 4 0 0 4 4 4 0 HTH DNA binding domain HTH_20 PF12840.7 gi|452208735|ref|YP_007488849.1| - 0.081 13.0 0.0 0.14 12.2 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_36 PF13730.6 gi|452208735|ref|YP_007488849.1| - 0.13 12.3 0.0 0.2 11.6 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain DUF4013 PF13197.6 gi|452208736|ref|YP_007488850.1| - 1.8e-11 44.1 18.4 7.1e-11 42.2 18.4 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF4013) EMC3_TMCO1 PF01956.16 gi|452208737|ref|YP_007488851.1| - 4.5 7.0 6.1 4.5 7.0 6.1 1.0 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like Herpes_U44 PF04533.13 gi|452208738|ref|YP_007488852.1| - 0.053 13.1 1.7 0.053 13.1 1.7 1.0 1 0 0 1 1 1 0 Herpes virus U44 protein CTP_synth_N PF06418.14 gi|452208739|ref|YP_007488853.1| - 7.7e-126 418.8 1.6 1.1e-125 418.3 1.6 1.2 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.28 gi|452208739|ref|YP_007488853.1| - 1.5e-55 187.9 0.0 3.1e-55 186.9 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|452208739|ref|YP_007488853.1| - 4e-05 23.5 0.0 0.00018 21.3 0.0 2.1 2 1 0 2 2 2 1 Peptidase C26 CbiA PF01656.23 gi|452208739|ref|YP_007488853.1| - 0.00021 21.4 0.0 0.001 19.1 0.0 2.2 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain MeaB PF03308.16 gi|452208739|ref|YP_007488853.1| - 0.028 13.4 0.2 0.062 12.3 0.2 1.5 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB DJ-1_PfpI PF01965.24 gi|452208739|ref|YP_007488853.1| - 0.044 13.6 0.1 0.3 10.9 0.0 2.3 2 1 0 2 2 2 0 DJ-1/PfpI family Trm112p PF03966.16 gi|452208741|ref|YP_007488855.1| - 8.1e-13 48.7 0.8 1.3e-12 48.1 0.8 1.3 1 1 0 1 1 1 1 Trm112p-like protein Elf1 PF05129.13 gi|452208741|ref|YP_007488855.1| - 0.00035 20.6 0.0 0.00035 20.6 0.0 1.0 1 0 0 1 1 1 1 Transcription elongation factor Elf1 like Cys_rich_KTR PF14205.6 gi|452208741|ref|YP_007488855.1| - 0.0044 16.8 1.6 0.0089 15.8 1.6 1.5 1 1 0 1 1 1 1 Cysteine-rich KTR C1_4 PF07975.12 gi|452208741|ref|YP_007488855.1| - 0.0097 16.1 0.1 0.015 15.5 0.1 1.3 1 1 0 1 1 1 1 TFIIH C1-like domain Lar_restr_allev PF14354.6 gi|452208741|ref|YP_007488855.1| - 0.01 16.2 0.3 0.014 15.8 0.3 1.2 1 0 0 1 1 1 0 Restriction alleviation protein Lar TF_Zn_Ribbon PF08271.12 gi|452208741|ref|YP_007488855.1| - 0.015 14.8 1.3 1.8 8.1 0.1 2.2 2 0 0 2 2 2 0 TFIIB zinc-binding zf-RING_UBOX PF13445.6 gi|452208741|ref|YP_007488855.1| - 0.023 14.7 2.6 1.4 9.0 0.5 2.1 2 0 0 2 2 2 0 RING-type zinc-finger zf-Di19 PF05605.12 gi|452208741|ref|YP_007488855.1| - 0.025 14.9 2.9 0.24 11.7 2.9 2.0 1 1 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding zf-C3HC4_5 PF17121.5 gi|452208741|ref|YP_007488855.1| - 0.026 14.4 0.7 3.9 7.5 0.0 2.1 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-WRNIP1_ubi PF18279.1 gi|452208741|ref|YP_007488855.1| - 0.035 14.7 0.6 8.1 7.3 0.0 2.3 2 0 0 2 2 2 0 Werner helicase-interacting protein 1 ubiquitin-binding domain zf-piccolo PF05715.13 gi|452208741|ref|YP_007488855.1| - 0.04 14.1 0.6 2.1 8.5 0.1 2.0 2 0 0 2 2 2 0 Piccolo Zn-finger zf-RRPl_C4 PF17026.5 gi|452208741|ref|YP_007488855.1| - 0.085 13.0 0.3 0.27 11.4 0.4 1.7 1 1 0 1 1 1 0 Putative ribonucleoprotein zinc-finger pf C4 type Zn-C2H2_12 PF18112.1 gi|452208741|ref|YP_007488855.1| - 0.093 13.2 6.4 0.32 11.5 0.7 2.2 2 0 0 2 2 2 0 Autophagy receptor zinc finger-C2H2 domain CoiA PF06054.11 gi|452208741|ref|YP_007488855.1| - 0.12 11.5 0.3 0.18 10.9 0.2 1.4 1 1 1 2 2 2 0 Competence protein CoiA-like family YacG PF03884.14 gi|452208741|ref|YP_007488855.1| - 0.13 12.1 0.9 13 5.7 0.1 2.2 2 0 0 2 2 2 0 DNA gyrase inhibitor YacG DpnI PF06044.12 gi|452208741|ref|YP_007488855.1| - 0.17 11.5 0.1 0.18 11.4 0.1 1.0 1 0 0 1 1 1 0 Dam-replacing family CcmH PF03918.14 gi|452208741|ref|YP_007488855.1| - 0.19 11.0 0.1 3.5 6.9 0.0 2.0 1 1 1 2 2 2 0 Cytochrome C biogenesis protein DUF3797 PF12677.7 gi|452208741|ref|YP_007488855.1| - 0.21 11.5 5.5 3.3 7.7 0.4 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) Anti-TRAP PF15777.5 gi|452208741|ref|YP_007488855.1| - 0.29 11.1 2.3 12 6.0 0.3 2.1 1 1 1 2 2 2 0 Tryptophan RNA-binding attenuator protein inhibitory protein DNA_ligase_ZBD PF03119.16 gi|452208741|ref|YP_007488855.1| - 1 9.5 7.0 7 6.8 0.3 2.5 2 1 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain Prim_Zn_Ribbon PF08273.12 gi|452208741|ref|YP_007488855.1| - 1.3 9.4 4.8 8.5 6.8 4.8 1.9 1 1 0 1 1 1 0 Zinc-binding domain of primase-helicase Rad50_zn_hook PF04423.14 gi|452208741|ref|YP_007488855.1| - 1.6 8.7 5.9 1.9 8.4 0.3 2.3 1 1 1 2 2 2 0 Rad50 zinc hook motif Prismane PF03063.20 gi|452208742|ref|YP_007488856.1| - 1.7e-169 564.8 1.7 2e-169 564.6 1.7 1.0 1 0 0 1 1 1 1 Prismane/CO dehydrogenase family E3_binding PF02817.17 gi|452208742|ref|YP_007488856.1| - 0.27 11.6 1.3 1.1 9.6 0.1 2.7 3 0 0 3 3 3 0 e3 binding domain Fer4_11 PF13247.6 gi|452208743|ref|YP_007488857.1| - 2.9e-12 46.6 17.4 2e-07 31.1 6.8 3.1 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|452208743|ref|YP_007488857.1| - 1.1e-11 45.1 26.6 1.9e-06 28.4 9.9 3.3 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452208743|ref|YP_007488857.1| - 3.3e-10 40.0 27.1 0.00012 22.2 9.2 3.2 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|452208743|ref|YP_007488857.1| - 4.8e-10 39.1 31.5 0.0099 15.9 0.7 4.4 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_10 PF13237.6 gi|452208743|ref|YP_007488857.1| - 1.5e-09 37.8 26.6 0.00028 20.9 9.4 3.2 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452208743|ref|YP_007488857.1| - 1.9e-08 33.9 32.2 0.0031 17.5 2.5 4.3 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4 PF00037.27 gi|452208743|ref|YP_007488857.1| - 1.3e-07 31.1 37.7 0.0077 16.0 3.8 5.7 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_8 PF13183.6 gi|452208743|ref|YP_007488857.1| - 6.7e-06 26.5 26.5 7.3e-05 23.1 7.6 2.8 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|452208743|ref|YP_007488857.1| - 0.00084 20.1 16.6 0.0034 18.2 3.5 4.4 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|452208743|ref|YP_007488857.1| - 0.0015 19.4 31.5 0.069 14.1 2.3 4.8 1 1 3 4 4 4 3 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|452208743|ref|YP_007488857.1| - 0.0021 18.5 22.4 0.35 11.4 0.2 4.2 3 1 1 4 4 4 3 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|452208743|ref|YP_007488857.1| - 0.0075 16.7 34.6 0.033 14.7 4.2 4.5 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_21 PF14697.6 gi|452208743|ref|YP_007488857.1| - 1.1 9.4 34.0 3 8.1 12.2 4.0 2 2 1 3 3 3 0 4Fe-4S dicluster domain Fer4_20 PF14691.6 gi|452208743|ref|YP_007488857.1| - 1.3 8.9 24.0 1.5 8.7 0.2 3.5 2 1 1 3 3 3 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Usp PF00582.26 gi|452208744|ref|YP_007488858.1| - 3.1e-32 112.0 1.0 3.5e-32 111.8 1.0 1.0 1 0 0 1 1 1 1 Universal stress protein family Gate PF07670.14 gi|452208745|ref|YP_007488859.1| - 4.6e-09 36.6 18.0 1.2e-05 25.6 2.1 2.9 2 2 0 2 2 2 2 Nucleoside recognition Usp PF00582.26 gi|452208746|ref|YP_007488860.1| - 1.3e-24 87.4 0.2 1.3e-24 87.3 0.2 1.0 1 0 0 1 1 1 1 Universal stress protein family MatP PF06303.12 gi|452208746|ref|YP_007488860.1| - 0.15 12.6 0.0 0.21 12.2 0.0 1.3 1 0 0 1 1 1 0 MatP N-terminal domain PmbA_TldD PF01523.16 gi|452208747|ref|YP_007488861.1| - 6.1e-54 183.7 2.3 9.4e-54 183.1 2.3 1.3 1 0 0 1 1 1 1 Putative modulator of DNA gyrase PmbA_TldD PF01523.16 gi|452208748|ref|YP_007488862.1| - 4.2e-66 223.6 0.4 4.2e-66 223.6 0.4 1.4 2 0 0 2 2 2 1 Putative modulator of DNA gyrase Lon_C PF05362.13 gi|452208749|ref|YP_007488863.1| - 1.2e-32 113.2 5.9 2.1e-32 112.3 5.9 1.4 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain AAA_32 PF13654.6 gi|452208749|ref|YP_007488863.1| - 2.5e-23 82.6 0.0 3.7e-20 72.2 0.0 2.2 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 gi|452208749|ref|YP_007488863.1| - 1.6e-16 60.3 1.0 9e-10 38.3 0.9 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 gi|452208749|ref|YP_007488863.1| - 3.4e-15 56.1 0.3 1e-08 35.1 0.0 2.5 2 0 0 2 2 2 2 Sigma-54 interaction domain ChlI PF13541.6 gi|452208749|ref|YP_007488863.1| - 5.2e-11 42.5 0.6 1e-10 41.5 0.6 1.5 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase AAA_5 PF07728.14 gi|452208749|ref|YP_007488863.1| - 5.6e-11 42.6 0.1 0.0002 21.4 0.0 2.6 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|452208749|ref|YP_007488863.1| - 1.2e-07 32.2 0.0 0.0027 18.1 0.1 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) MCM PF00493.23 gi|452208749|ref|YP_007488863.1| - 1e-06 28.0 2.4 0.026 13.6 0.0 3.3 4 0 0 4 4 4 2 MCM P-loop domain AAA_22 PF13401.6 gi|452208749|ref|YP_007488863.1| - 2.9e-06 27.6 0.1 0.00015 22.0 0.0 2.7 3 0 0 3 3 2 1 AAA domain RuvB_N PF05496.12 gi|452208749|ref|YP_007488863.1| - 9e-05 22.3 0.0 0.042 13.6 0.0 2.4 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_19 PF13245.6 gi|452208749|ref|YP_007488863.1| - 0.00011 22.6 0.3 0.00043 20.6 0.3 1.9 1 1 0 1 1 1 1 AAA domain AAA_3 PF07726.11 gi|452208749|ref|YP_007488863.1| - 0.00041 20.2 0.1 0.94 9.3 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) Sigma54_activ_2 PF14532.6 gi|452208749|ref|YP_007488863.1| - 0.00041 20.5 0.0 0.2 11.8 0.0 2.5 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_7 PF12775.7 gi|452208749|ref|YP_007488863.1| - 0.00057 19.4 0.0 0.0033 17.0 0.0 2.0 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_30 PF13604.6 gi|452208749|ref|YP_007488863.1| - 0.0018 18.0 0.3 0.0062 16.3 0.3 1.9 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|452208749|ref|YP_007488863.1| - 0.0022 18.4 0.1 0.13 12.6 0.0 2.7 3 0 0 3 3 3 1 AAA ATPase domain TIP49 PF06068.13 gi|452208749|ref|YP_007488863.1| - 0.0031 16.8 0.0 1.6 7.8 0.0 2.3 2 0 0 2 2 2 2 TIP49 P-loop domain AAA_28 PF13521.6 gi|452208749|ref|YP_007488863.1| - 0.0062 16.8 0.0 0.024 14.9 0.0 2.0 2 0 0 2 2 1 1 AAA domain PhoH PF02562.16 gi|452208749|ref|YP_007488863.1| - 0.009 15.5 0.2 0.024 14.1 0.0 1.8 2 0 0 2 2 1 1 PhoH-like protein Parvo_NS1 PF01057.17 gi|452208749|ref|YP_007488863.1| - 0.011 14.9 0.0 0.018 14.1 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 T2SSE PF00437.20 gi|452208749|ref|YP_007488863.1| - 0.015 14.4 0.1 0.058 12.4 0.0 1.9 2 0 0 2 2 2 0 Type II/IV secretion system protein TrwB_AAD_bind PF10412.9 gi|452208749|ref|YP_007488863.1| - 0.015 14.2 0.1 0.027 13.4 0.1 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain IstB_IS21 PF01695.17 gi|452208749|ref|YP_007488863.1| - 0.023 14.4 0.1 0.07 12.9 0.0 1.8 2 0 0 2 2 2 0 IstB-like ATP binding protein TniB PF05621.11 gi|452208749|ref|YP_007488863.1| - 0.029 13.8 0.5 0.1 12.0 0.1 2.0 2 0 0 2 2 2 0 Bacterial TniB protein AAA_33 PF13671.6 gi|452208749|ref|YP_007488863.1| - 0.029 14.5 0.0 0.079 13.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 gi|452208749|ref|YP_007488863.1| - 0.031 14.8 0.0 0.13 12.8 0.0 2.0 2 0 0 2 2 1 0 ABC transporter AAA_18 PF13238.6 gi|452208749|ref|YP_007488863.1| - 0.049 14.2 0.0 0.19 12.3 0.0 2.1 1 0 0 1 1 1 0 AAA domain Styelin PF17562.2 gi|452208749|ref|YP_007488863.1| - 0.093 13.1 0.0 0.26 11.6 0.0 1.7 1 0 0 1 1 1 0 Styelin NACHT PF05729.12 gi|452208749|ref|YP_007488863.1| - 0.12 12.3 0.0 0.28 11.1 0.0 1.7 1 0 0 1 1 1 0 NACHT domain AAA_2 PF07724.14 gi|452208749|ref|YP_007488863.1| - 0.13 12.4 3.3 5.4 7.1 0.2 3.0 3 1 0 3 3 2 0 AAA domain (Cdc48 subfamily) DUF815 PF05673.13 gi|452208749|ref|YP_007488863.1| - 0.13 11.4 0.0 0.25 10.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF815) TPR_2 PF07719.17 gi|452208750|ref|YP_007488864.1| - 2.7e-16 58.3 5.6 2.8e-05 23.9 1.2 4.5 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_12 PF13424.6 gi|452208750|ref|YP_007488864.1| - 3.1e-14 53.0 6.5 6e-06 26.5 1.4 3.2 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_1 PF00515.28 gi|452208750|ref|YP_007488864.1| - 1.6e-12 46.6 10.5 3.1e-05 23.6 2.4 4.4 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_8 PF13181.6 gi|452208750|ref|YP_007488864.1| - 4.4e-10 39.0 14.3 0.004 17.3 0.2 4.4 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_10 PF13374.6 gi|452208750|ref|YP_007488864.1| - 1.6e-09 37.3 1.1 0.014 15.3 0.1 3.5 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_14 PF13428.6 gi|452208750|ref|YP_007488864.1| - 1.7e-09 37.7 2.1 0.033 15.0 0.2 4.6 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|452208750|ref|YP_007488864.1| - 6e-08 32.4 0.1 0.00026 20.5 0.0 2.1 1 1 1 2 2 2 2 MalT-like TPR region TPR_6 PF13174.6 gi|452208750|ref|YP_007488864.1| - 2e-07 31.2 7.9 0.94 10.3 0.7 5.0 4 2 0 4 4 4 1 Tetratricopeptide repeat TPR_11 PF13414.6 gi|452208750|ref|YP_007488864.1| - 4e-07 29.6 16.9 0.023 14.4 4.5 5.5 3 1 1 4 4 4 3 TPR repeat TPR_16 PF13432.6 gi|452208750|ref|YP_007488864.1| - 1.1e-06 29.2 0.4 0.0076 16.9 0.1 3.5 3 1 0 3 3 3 1 Tetratricopeptide repeat TPR_19 PF14559.6 gi|452208750|ref|YP_007488864.1| - 1.4e-06 28.7 8.7 0.29 11.7 2.6 4.1 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_7 PF13176.6 gi|452208750|ref|YP_007488864.1| - 6.8e-06 25.7 1.1 0.29 11.3 0.1 4.2 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_17 PF13431.6 gi|452208750|ref|YP_007488864.1| - 3.1e-05 24.1 8.6 0.052 14.0 0.2 4.9 4 2 0 4 4 4 2 Tetratricopeptide repeat SPO22 PF08631.10 gi|452208750|ref|YP_007488864.1| - 4.5e-05 23.1 3.0 0.00026 20.6 0.4 2.1 2 0 0 2 2 2 1 Meiosis protein SPO22/ZIP4 like TPR_21 PF09976.9 gi|452208750|ref|YP_007488864.1| - 5e-05 23.1 6.3 0.001 18.8 2.2 2.9 2 1 1 3 3 3 1 Tetratricopeptide repeat-like domain SNAP PF14938.6 gi|452208750|ref|YP_007488864.1| - 0.00033 20.2 6.4 0.0092 15.4 0.4 2.3 1 1 1 2 2 2 2 Soluble NSF attachment protein, SNAP PTS_IIA PF02255.16 gi|452208750|ref|YP_007488864.1| - 0.0004 20.4 4.1 0.54 10.3 0.0 3.3 2 1 2 4 4 4 2 PTS system, Lactose/Cellobiose specific IIA subunit ANAPC3 PF12895.7 gi|452208750|ref|YP_007488864.1| - 0.00084 19.5 6.1 0.17 12.1 1.5 3.5 1 1 2 3 3 3 1 Anaphase-promoting complex, cyclosome, subunit 3 Fis1_TPR_C PF14853.6 gi|452208750|ref|YP_007488864.1| - 0.011 15.8 5.9 2 8.5 0.1 3.9 4 1 0 4 4 3 0 Fis1 C-terminal tetratricopeptide repeat YfdX PF10938.8 gi|452208750|ref|YP_007488864.1| - 0.013 15.5 4.8 0.16 11.9 0.4 2.7 2 1 0 2 2 2 0 YfdX protein TPR_3 PF07720.12 gi|452208750|ref|YP_007488864.1| - 0.013 15.5 6.0 0.86 9.7 0.3 3.9 4 0 0 4 4 3 0 Tetratricopeptide repeat PUL PF08324.11 gi|452208750|ref|YP_007488864.1| - 0.02 14.1 0.3 0.032 13.5 0.3 1.3 1 0 0 1 1 1 0 PUL domain SRP68 PF16969.5 gi|452208750|ref|YP_007488864.1| - 0.024 13.6 4.7 2.5 7.0 1.1 2.8 1 1 2 3 3 3 0 RNA-binding signal recognition particle 68 ANAPC5 PF12862.7 gi|452208750|ref|YP_007488864.1| - 0.025 14.6 1.6 11 6.1 0.0 2.9 2 1 1 3 3 3 0 Anaphase-promoting complex subunit 5 ComR_TPR PF18710.1 gi|452208750|ref|YP_007488864.1| - 0.028 14.0 1.5 0.043 13.4 1.5 1.3 1 0 0 1 1 1 0 ComR tetratricopeptide Ribosomal_L22 PF00237.19 gi|452208750|ref|YP_007488864.1| - 0.066 13.4 0.7 0.18 12.1 0.7 1.8 1 1 0 1 1 1 0 Ribosomal protein L22p/L17e PPR PF01535.20 gi|452208750|ref|YP_007488864.1| - 0.075 13.3 2.1 34 5.0 0.0 3.9 4 0 0 4 4 4 0 PPR repeat TPR_5 PF12688.7 gi|452208750|ref|YP_007488864.1| - 0.079 13.2 0.6 0.38 11.0 0.1 2.3 2 1 1 3 3 2 0 Tetratrico peptide repeat ArnB_C PF18677.1 gi|452208750|ref|YP_007488864.1| - 0.09 12.9 6.7 0.39 10.8 0.2 3.4 4 1 1 5 5 3 0 Archaellum regulatory network B, C-terminal domain BTAD PF03704.17 gi|452208750|ref|YP_007488864.1| - 0.091 13.2 0.6 8.7 6.8 0.0 2.7 2 1 0 3 3 3 0 Bacterial transcriptional activator domain TOM20_plant PF06552.12 gi|452208750|ref|YP_007488864.1| - 0.1 12.3 3.9 1.8 8.3 0.2 2.5 1 1 2 3 3 3 0 Plant specific mitochondrial import receptor subunit TOM20 ATP-synt_D PF01813.17 gi|452208750|ref|YP_007488864.1| - 0.14 11.9 1.3 3.9 7.2 0.1 2.8 2 2 0 2 2 2 0 ATP synthase subunit D PPR_1 PF12854.7 gi|452208750|ref|YP_007488864.1| - 0.16 11.7 0.1 5 6.9 0.1 2.3 2 0 0 2 2 2 0 PPR repeat MIT PF04212.18 gi|452208750|ref|YP_007488864.1| - 0.59 10.3 14.7 0.33 11.0 1.2 4.0 3 1 1 4 4 4 0 MIT (microtubule interacting and transport) domain RAMP PF04901.13 gi|452208751|ref|YP_007488865.1| - 0.018 15.1 0.0 0.035 14.1 0.0 1.5 1 0 0 1 1 1 0 Receptor activity modifying family EcsB PF05975.12 gi|452208751|ref|YP_007488865.1| - 0.023 13.6 10.7 0.03 13.2 0.7 2.0 2 0 0 2 2 2 0 Bacterial ABC transporter protein EcsB DUF3923 PF13061.6 gi|452208751|ref|YP_007488865.1| - 0.057 13.5 0.5 0.057 13.5 0.5 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF3923) DUF3040 PF11239.8 gi|452208751|ref|YP_007488865.1| - 0.061 13.6 0.1 0.37 11.1 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) DUF4191 PF13829.6 gi|452208751|ref|YP_007488865.1| - 0.062 12.6 3.4 4.8 6.5 2.8 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4191) DHHC PF01529.20 gi|452208751|ref|YP_007488865.1| - 0.98 9.5 5.0 4.4 7.4 5.0 2.0 1 1 0 1 1 1 0 DHHC palmitoyltransferase Gemini_mov PF01708.16 gi|452208751|ref|YP_007488865.1| - 1.4 8.7 6.4 0.33 10.7 0.2 2.4 1 1 0 2 2 2 0 Geminivirus putative movement protein 2TM PF13239.6 gi|452208751|ref|YP_007488865.1| - 4.2 7.7 10.5 1.7 9.0 0.3 2.2 2 0 0 2 2 2 0 2TM domain Wzy_C PF04932.15 gi|452208751|ref|YP_007488865.1| - 6.9 6.3 11.5 1.4 8.5 1.2 2.1 2 0 0 2 2 2 0 O-Antigen ligase TPR_1 PF00515.28 gi|452208752|ref|YP_007488866.1| - 2.7e-20 71.3 3.4 2.3e-06 27.2 0.2 6.2 5 1 1 6 6 6 3 Tetratricopeptide repeat TPR_12 PF13424.6 gi|452208752|ref|YP_007488866.1| - 3.5e-20 72.1 6.0 5.2e-06 26.7 0.2 4.5 3 2 1 4 4 4 3 Tetratricopeptide repeat TPR_2 PF07719.17 gi|452208752|ref|YP_007488866.1| - 3.4e-17 61.1 3.7 5.9e-06 26.0 0.2 5.8 4 2 2 6 6 6 5 Tetratricopeptide repeat TPR_10 PF13374.6 gi|452208752|ref|YP_007488866.1| - 4.9e-15 54.8 4.8 4e-07 29.7 0.0 5.4 5 1 1 6 6 6 2 Tetratricopeptide repeat TPR_8 PF13181.6 gi|452208752|ref|YP_007488866.1| - 1.1e-11 44.0 8.1 0.00011 22.2 0.3 5.0 5 0 0 5 5 4 3 Tetratricopeptide repeat TPR_7 PF13176.6 gi|452208752|ref|YP_007488866.1| - 1.6e-11 43.4 0.8 0.00083 19.2 0.1 5.2 5 1 0 5 5 5 3 Tetratricopeptide repeat TPR_11 PF13414.6 gi|452208752|ref|YP_007488866.1| - 4.6e-08 32.6 3.7 0.023 14.3 0.4 5.3 5 2 1 6 6 5 2 TPR repeat TPR_6 PF13174.6 gi|452208752|ref|YP_007488866.1| - 8.6e-08 32.3 1.9 0.00066 20.2 0.2 5.1 4 3 1 5 5 4 1 Tetratricopeptide repeat TPR_14 PF13428.6 gi|452208752|ref|YP_007488866.1| - 6.2e-07 29.7 1.0 0.26 12.2 0.0 4.6 3 1 1 4 4 4 1 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|452208752|ref|YP_007488866.1| - 1.9e-06 27.5 0.6 0.00088 18.7 0.1 2.2 1 1 1 2 2 2 2 MalT-like TPR region TPR_21 PF09976.9 gi|452208752|ref|YP_007488866.1| - 2.2e-05 24.3 0.1 0.054 13.2 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat-like domain TPR_19 PF14559.6 gi|452208752|ref|YP_007488866.1| - 0.00031 21.2 7.2 2.6 8.6 0.1 3.8 3 1 1 4 4 3 2 Tetratricopeptide repeat TPR_16 PF13432.6 gi|452208752|ref|YP_007488866.1| - 0.00058 20.4 0.3 0.8 10.4 0.0 3.5 3 1 0 3 3 2 1 Tetratricopeptide repeat TPR_17 PF13431.6 gi|452208752|ref|YP_007488866.1| - 0.0018 18.5 9.6 0.092 13.2 0.0 5.6 4 1 0 4 4 4 1 Tetratricopeptide repeat TPR_9 PF13371.6 gi|452208752|ref|YP_007488866.1| - 0.0023 18.1 0.1 5.1 7.3 0.0 3.5 3 1 1 4 4 4 1 Tetratricopeptide repeat YfdX PF10938.8 gi|452208752|ref|YP_007488866.1| - 0.0039 17.1 0.2 0.14 12.0 0.2 2.2 2 0 0 2 2 2 1 YfdX protein NARP1 PF12569.8 gi|452208752|ref|YP_007488866.1| - 0.005 15.8 8.3 0.17 10.8 0.4 2.5 1 1 2 3 3 3 3 NMDA receptor-regulated protein 1 TOM20_plant PF06552.12 gi|452208752|ref|YP_007488866.1| - 0.0064 16.3 0.8 0.2 11.4 0.1 3.1 1 1 3 4 4 4 1 Plant specific mitochondrial import receptor subunit TOM20 TPR_3 PF07720.12 gi|452208752|ref|YP_007488866.1| - 0.0095 15.9 0.9 4.6 7.3 0.0 2.9 2 0 0 2 2 2 1 Tetratricopeptide repeat SNAP PF14938.6 gi|452208752|ref|YP_007488866.1| - 0.012 15.1 0.9 0.12 11.8 1.1 2.1 1 1 1 2 2 2 0 Soluble NSF attachment protein, SNAP Fis1_TPR_C PF14853.6 gi|452208752|ref|YP_007488866.1| - 0.016 15.3 1.7 4.6 7.4 0.0 3.0 3 0 0 3 3 3 0 Fis1 C-terminal tetratricopeptide repeat RPN6_N PF18055.1 gi|452208752|ref|YP_007488866.1| - 0.017 15.5 3.8 0.022 15.1 0.6 2.6 2 2 2 4 4 4 0 26S proteasome regulatory subunit RPN6 N-terminal domain Rubredoxin_C PF18267.1 gi|452208752|ref|YP_007488866.1| - 0.018 15.0 0.1 0.26 11.2 0.0 2.4 2 0 0 2 2 2 0 Rubredoxin NAD+ reductase C-terminal domain RPN7 PF10602.9 gi|452208752|ref|YP_007488866.1| - 0.029 14.1 2.0 2.3 7.9 0.1 2.5 1 1 1 2 2 2 0 26S proteasome subunit RPN7 TPR_4 PF07721.14 gi|452208752|ref|YP_007488866.1| - 0.03 15.0 0.0 11 7.0 0.1 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat SHNi-TPR PF10516.9 gi|452208752|ref|YP_007488866.1| - 0.037 13.5 2.0 0.15 11.6 0.7 2.6 2 0 0 2 2 2 0 SHNi-TPR YfiO PF13525.6 gi|452208752|ref|YP_007488866.1| - 0.042 13.6 0.9 0.055 13.2 0.1 1.7 2 0 0 2 2 2 0 Outer membrane lipoprotein FliS PF02561.14 gi|452208752|ref|YP_007488866.1| - 0.043 14.1 0.9 1.8 8.9 0.2 2.4 2 0 0 2 2 2 0 Flagellar protein FliS DUF3856 PF12968.7 gi|452208752|ref|YP_007488866.1| - 0.07 13.2 0.2 48 4.0 0.0 3.1 2 1 1 3 3 3 0 Domain of Unknown Function (DUF3856) PTS_IIA PF02255.16 gi|452208752|ref|YP_007488866.1| - 0.089 12.8 1.0 9.3 6.4 0.5 2.4 2 0 0 2 2 2 0 PTS system, Lactose/Cellobiose specific IIA subunit MIT PF04212.18 gi|452208752|ref|YP_007488866.1| - 0.14 12.2 10.1 0.64 10.1 0.6 4.0 4 1 0 4 4 4 0 MIT (microtubule interacting and transport) domain DUF5344 PF17279.2 gi|452208752|ref|YP_007488866.1| - 0.23 12.1 3.7 0.37 11.4 0.3 2.5 2 1 0 2 2 2 0 Family of unknown function (DUF5344) ANAPC5 PF12862.7 gi|452208752|ref|YP_007488866.1| - 0.24 11.5 1.6 0.88 9.7 0.3 2.5 2 1 1 3 3 3 0 Anaphase-promoting complex subunit 5 zinc_ribbon_13 PF09855.9 gi|452208753|ref|YP_007488867.1| - 8.6e-28 96.3 1.2 9.6e-28 96.1 1.2 1.0 1 0 0 1 1 1 1 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) Ribosomal_L37e PF01907.19 gi|452208753|ref|YP_007488867.1| - 5.7e-05 23.2 1.4 0.14 12.4 0.4 2.1 2 0 0 2 2 2 2 Ribosomal protein L37e Zn_Tnp_IS1595 PF12760.7 gi|452208753|ref|YP_007488867.1| - 0.00043 20.2 2.2 0.0012 18.7 2.2 1.7 1 1 0 1 1 1 1 Transposase zinc-ribbon domain Mcm10 PF09332.11 gi|452208753|ref|YP_007488867.1| - 0.0022 17.5 0.9 0.0033 16.9 0.0 1.6 2 0 0 2 2 2 1 Mcm10 replication factor zf-C2H2_3 PF13878.6 gi|452208753|ref|YP_007488867.1| - 0.0045 16.8 2.1 0.037 13.8 0.1 2.2 2 0 0 2 2 2 1 zinc-finger of acetyl-transferase ESCO zinc_ribbon_10 PF10058.9 gi|452208753|ref|YP_007488867.1| - 0.0059 16.3 0.9 0.51 10.1 0.1 2.2 2 0 0 2 2 2 1 Predicted integral membrane zinc-ribbon metal-binding protein TF_Zn_Ribbon PF08271.12 gi|452208753|ref|YP_007488867.1| - 0.0083 15.6 0.5 0.21 11.2 0.1 2.1 2 0 0 2 2 2 1 TFIIB zinc-binding zf-Mss51 PF13824.6 gi|452208753|ref|YP_007488867.1| - 0.017 15.2 0.2 0.22 11.6 0.0 2.0 2 0 0 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 CpXC PF14353.6 gi|452208753|ref|YP_007488867.1| - 0.045 13.8 2.9 0.53 10.3 3.0 2.0 1 1 1 2 2 2 0 CpXC protein TFIIS_C PF01096.18 gi|452208753|ref|YP_007488867.1| - 0.084 12.8 2.7 4.9 7.1 0.2 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zf-RRN7 PF11781.8 gi|452208753|ref|YP_007488867.1| - 0.12 12.1 2.1 0.3 10.8 0.2 2.1 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 zf_C2H2_10 PF18414.1 gi|452208753|ref|YP_007488867.1| - 0.13 11.9 1.9 0.19 11.3 0.1 2.0 2 0 0 2 2 2 0 C2H2 type zinc-finger zf_UBZ PF18439.1 gi|452208753|ref|YP_007488867.1| - 0.13 11.9 3.6 2.1 8.0 0.2 2.3 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger RNA_POL_M_15KD PF02150.16 gi|452208753|ref|YP_007488867.1| - 0.15 12.0 3.9 6.7 6.7 0.1 2.2 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit DUF1610 PF07754.11 gi|452208753|ref|YP_007488867.1| - 0.22 11.5 4.2 0.26 11.3 2.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) PALP PF00291.25 gi|452208755|ref|YP_007488869.1| - 5.3e-40 137.7 0.0 6.8e-40 137.3 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme TPP_enzyme_C PF02775.21 gi|452208756|ref|YP_007488870.1| - 2.5e-19 69.6 0.1 9.4e-18 64.5 0.1 2.6 2 1 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_N PF02776.18 gi|452208756|ref|YP_007488870.1| - 4.7e-11 42.6 0.0 1.3e-10 41.1 0.0 1.6 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HcyBio PF01837.16 gi|452208757|ref|YP_007488871.1| - 9.2e-107 356.9 0.0 1e-106 356.7 0.0 1.0 1 0 0 1 1 1 1 Homocysteine biosynthesis enzyme, sulfur-incorporation Fer4 PF00037.27 gi|452208757|ref|YP_007488871.1| - 1.2e-05 24.9 14.5 0.0032 17.2 0.6 3.4 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|452208757|ref|YP_007488871.1| - 0.00014 22.0 10.2 0.00036 20.6 10.2 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452208757|ref|YP_007488871.1| - 0.00037 20.4 12.5 0.014 15.4 3.2 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|452208757|ref|YP_007488871.1| - 0.00088 19.8 12.2 0.0076 16.8 12.1 2.5 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|452208757|ref|YP_007488871.1| - 0.0016 18.5 12.1 0.0045 17.1 12.1 1.9 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|452208757|ref|YP_007488871.1| - 0.0085 16.1 12.9 0.04 14.0 4.5 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|452208757|ref|YP_007488871.1| - 0.042 14.1 3.5 0.07 13.3 2.6 1.8 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|452208757|ref|YP_007488871.1| - 0.17 12.1 12.7 0.19 11.9 10.1 2.4 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|452208757|ref|YP_007488871.1| - 1.2 9.9 12.5 4 8.2 2.0 3.0 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_16 PF13484.6 gi|452208757|ref|YP_007488871.1| - 2 9.4 11.1 8.2 7.4 2.7 2.6 2 0 0 2 2 2 0 4Fe-4S double cluster binding domain Fer4_8 PF13183.6 gi|452208757|ref|YP_007488871.1| - 7.8 7.0 12.6 4.3 7.9 0.8 2.6 2 1 1 3 3 3 0 4Fe-4S dicluster domain Lactamase_B PF00753.27 gi|452208758|ref|YP_007488872.1| - 2.2e-15 57.2 0.1 3.1e-15 56.7 0.1 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|452208758|ref|YP_007488872.1| - 7.7e-06 25.6 0.1 1.2e-05 24.9 0.1 1.5 1 1 0 1 1 1 1 Beta-lactamase superfamily domain ThiS PF02597.20 gi|452208760|ref|YP_007488874.1| - 0.00023 21.7 1.5 0.00033 21.2 1.5 1.3 1 1 0 1 1 1 1 ThiS family HTH_34 PF13601.6 gi|452208763|ref|YP_007488877.1| - 0.0099 16.0 0.0 0.022 15.0 0.0 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain DSPc PF00782.20 gi|452208763|ref|YP_007488877.1| - 0.017 14.9 0.8 0.12 12.2 0.1 2.0 1 1 1 2 2 2 0 Dual specificity phosphatase, catalytic domain TrmB PF01978.19 gi|452208763|ref|YP_007488877.1| - 0.037 13.9 0.1 0.088 12.7 0.0 1.7 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB Cytochrom_C_asm PF01578.20 gi|452208764|ref|YP_007488878.1| - 1.9e-25 89.9 28.4 1.9e-25 89.9 28.4 2.5 2 1 1 3 3 3 2 Cytochrome C assembly protein CcmF_C PF16327.5 gi|452208765|ref|YP_007488879.1| - 3.8e-14 52.7 3.1 7e-14 51.8 3.1 1.4 1 1 0 1 1 1 1 Cytochrome c-type biogenesis protein CcmF C-terminal ResB PF05140.14 gi|452208765|ref|YP_007488879.1| - 6.8e-08 31.7 0.5 0.00055 18.8 0.1 2.1 2 0 0 2 2 2 2 ResB-like family CarS-like PF01864.17 gi|452208766|ref|YP_007488880.1| - 1.9e-45 155.0 1.1 2.1e-45 154.8 1.1 1.0 1 0 0 1 1 1 1 CDP-archaeol synthase CTP_transf_1 PF01148.20 gi|452208766|ref|YP_007488880.1| - 1.5e-06 28.2 2.9 1.5e-06 28.2 2.9 1.9 1 1 1 2 2 2 1 Cytidylyltransferase family Pribosyltran PF00156.27 gi|452208767|ref|YP_007488881.1| - 1.1e-13 51.0 1.7 1.8e-13 50.3 1.7 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Glycogen_syn PF05693.13 gi|452208767|ref|YP_007488881.1| - 0.048 12.2 0.0 0.063 11.8 0.0 1.1 1 0 0 1 1 1 0 Glycogen synthase UPRTase PF14681.6 gi|452208767|ref|YP_007488881.1| - 0.068 12.6 0.0 0.17 11.3 0.0 1.6 1 1 1 2 2 2 0 Uracil phosphoribosyltransferase CMD PF02627.20 gi|452208768|ref|YP_007488882.1| - 2.3e-12 46.8 0.1 2.5e-12 46.6 0.1 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family 4HPAD_g_N PF18671.1 gi|452208768|ref|YP_007488882.1| - 0.061 13.1 0.0 0.12 12.1 0.0 1.5 1 0 0 1 1 1 0 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal DUF3489 PF11994.8 gi|452208768|ref|YP_007488882.1| - 0.074 13.1 0.0 0.12 12.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3489) ATP-sulfurylase PF01747.17 gi|452208768|ref|YP_007488882.1| - 0.13 11.7 0.0 0.15 11.5 0.0 1.2 1 0 0 1 1 1 0 ATP-sulfurylase GARS_A PF01071.19 gi|452208769|ref|YP_007488883.1| - 1.1e-56 191.7 0.0 2.3e-56 190.6 0.0 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_N PF02844.15 gi|452208769|ref|YP_007488883.1| - 3.2e-26 91.9 0.2 6.2e-26 91.0 0.2 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, N domain GARS_C PF02843.16 gi|452208769|ref|YP_007488883.1| - 4.7e-15 55.6 1.1 1e-14 54.5 0.5 2.0 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, C domain ATP-grasp_3 PF02655.14 gi|452208769|ref|YP_007488883.1| - 0.0024 17.9 0.0 0.0044 17.1 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.6 gi|452208769|ref|YP_007488883.1| - 0.024 14.2 0.0 0.06 12.9 0.0 1.7 1 0 0 1 1 1 0 ATP-grasp domain LpxI_N PF17930.1 gi|452208769|ref|YP_007488883.1| - 0.043 13.7 0.1 0.21 11.5 0.1 2.2 2 0 0 2 2 2 0 LpxI N-terminal domain GSH-S_ATP PF02955.16 gi|452208769|ref|YP_007488883.1| - 0.067 12.6 0.0 0.14 11.5 0.0 1.5 1 0 0 1 1 1 0 Prokaryotic glutathione synthetase, ATP-grasp domain QRPTase_N PF02749.16 gi|452208769|ref|YP_007488883.1| - 0.088 12.9 0.0 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 Quinolinate phosphoribosyl transferase, N-terminal domain GFO_IDH_MocA PF01408.22 gi|452208769|ref|YP_007488883.1| - 0.089 13.6 0.1 0.36 11.6 0.0 2.1 3 0 0 3 3 3 0 Oxidoreductase family, NAD-binding Rossmann fold CPSase_L_D2 PF02786.17 gi|452208769|ref|YP_007488883.1| - 0.099 12.1 0.0 0.24 10.9 0.0 1.7 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain OTCace PF00185.24 gi|452208770|ref|YP_007488884.1| - 5.6e-59 198.7 0.0 7.7e-59 198.3 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OTCace_N PF02729.21 gi|452208770|ref|YP_007488884.1| - 9.6e-53 178.2 0.0 1.3e-52 177.7 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DUF4107 PF13389.6 gi|452208770|ref|YP_007488884.1| - 0.16 12.1 0.0 2.9 8.0 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4107) DUF1788 PF08747.11 gi|452208772|ref|YP_007488886.1| - 1.3e-40 138.2 0.1 1.9e-40 137.7 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1788) KAP_NTPase PF07693.14 gi|452208773|ref|YP_007488887.1| - 0.0053 16.0 0.0 0.019 14.2 0.0 2.1 1 1 0 1 1 1 1 KAP family P-loop domain SMC_N PF02463.19 gi|452208773|ref|YP_007488887.1| - 0.071 12.5 5.1 0.022 14.2 0.6 2.5 2 1 0 2 2 2 0 RecF/RecN/SMC N terminal domain NACHT PF05729.12 gi|452208773|ref|YP_007488887.1| - 0.1 12.5 0.0 0.31 10.9 0.0 1.8 1 0 0 1 1 1 0 NACHT domain ATP-cone PF03477.16 gi|452208773|ref|YP_007488887.1| - 7.2 7.3 8.4 20 5.8 0.8 4.4 3 1 1 4 4 4 0 ATP cone domain TPR_12 PF13424.6 gi|452208774|ref|YP_007488888.1| - 3.4e-23 81.7 30.4 0.0038 17.5 1.4 11.4 8 4 1 9 9 9 6 Tetratricopeptide repeat TPR_8 PF13181.6 gi|452208774|ref|YP_007488888.1| - 1.7e-18 65.2 49.4 0.0012 18.8 0.5 13.6 14 0 0 14 14 13 6 Tetratricopeptide repeat TPR_1 PF00515.28 gi|452208774|ref|YP_007488888.1| - 1.8e-17 62.3 38.7 0.0086 15.9 0.0 11.8 13 0 0 13 13 12 7 Tetratricopeptide repeat TPR_7 PF13176.6 gi|452208774|ref|YP_007488888.1| - 1.3e-15 56.2 17.6 0.084 12.9 0.1 10.7 11 0 0 11 11 10 3 Tetratricopeptide repeat TPR_14 PF13428.6 gi|452208774|ref|YP_007488888.1| - 1.6e-14 53.4 9.2 1.9 9.5 0.2 11.8 14 0 0 14 14 12 2 Tetratricopeptide repeat TPR_10 PF13374.6 gi|452208774|ref|YP_007488888.1| - 1.3e-13 50.3 7.7 0.035 14.0 0.0 8.2 9 0 0 9 9 9 3 Tetratricopeptide repeat TPR_2 PF07719.17 gi|452208774|ref|YP_007488888.1| - 6.8e-13 47.7 45.5 0.038 14.1 0.6 12.7 14 0 0 14 14 13 5 Tetratricopeptide repeat TPR_6 PF13174.6 gi|452208774|ref|YP_007488888.1| - 4.6e-08 33.2 29.0 9.6 7.1 0.6 12.5 13 1 0 13 13 10 0 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|452208774|ref|YP_007488888.1| - 4.6e-08 32.8 7.4 0.012 15.0 0.2 5.1 5 1 1 6 6 6 2 MalT-like TPR region DUF2225 PF09986.9 gi|452208774|ref|YP_007488888.1| - 5.1e-05 23.1 9.0 0.18 11.5 0.2 4.9 1 1 0 3 3 3 2 Uncharacterized protein conserved in bacteria (DUF2225) MIT PF04212.18 gi|452208774|ref|YP_007488888.1| - 8.5e-05 22.6 19.9 0.058 13.5 0.7 7.3 7 0 0 7 7 6 2 MIT (microtubule interacting and transport) domain TPR_19 PF14559.6 gi|452208774|ref|YP_007488888.1| - 9.2e-05 22.9 23.5 0.4 11.2 0.0 8.4 7 2 2 10 10 9 3 Tetratricopeptide repeat TPR_16 PF13432.6 gi|452208774|ref|YP_007488888.1| - 0.0019 18.8 7.2 26 5.5 0.3 7.1 6 2 0 6 6 5 0 Tetratricopeptide repeat TPR_21 PF09976.9 gi|452208774|ref|YP_007488888.1| - 0.013 15.2 16.1 0.9 9.2 0.2 4.6 5 1 0 5 5 4 0 Tetratricopeptide repeat-like domain RPN7 PF10602.9 gi|452208774|ref|YP_007488888.1| - 0.018 14.8 14.2 12 5.5 0.0 6.5 5 1 1 6 6 6 0 26S proteasome subunit RPN7 TPR_11 PF13414.6 gi|452208774|ref|YP_007488888.1| - 0.018 14.7 25.7 0.092 12.4 0.2 7.7 9 0 0 9 9 9 0 TPR repeat TPR_17 PF13431.6 gi|452208774|ref|YP_007488888.1| - 0.02 15.2 10.5 21 5.8 0.1 8.3 10 0 0 10 10 9 0 Tetratricopeptide repeat IPK PF03770.16 gi|452208774|ref|YP_007488888.1| - 0.071 13.0 0.2 0.25 11.2 0.0 2.1 2 0 0 2 2 2 0 Inositol polyphosphate kinase YfdX PF10938.8 gi|452208774|ref|YP_007488888.1| - 0.088 12.7 1.9 0.41 10.6 0.2 3.1 4 0 0 4 4 4 0 YfdX protein N6_Mtase PF02384.16 gi|452208775|ref|YP_007488889.1| - 2.8e-10 40.0 0.0 0.00018 20.9 0.0 2.4 2 0 0 2 2 2 2 N-6 DNA Methylase Eco57I PF07669.11 gi|452208775|ref|YP_007488889.1| - 3.1e-08 34.1 0.2 1.6e-07 31.8 0.0 2.3 3 0 0 3 3 3 1 Eco57I restriction-modification methylase DUF724 PF05266.14 gi|452208776|ref|YP_007488890.1| - 0.0032 17.3 2.8 0.0065 16.3 2.8 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF724) Dzip-like_N PF13815.6 gi|452208776|ref|YP_007488890.1| - 0.0061 16.5 0.4 0.014 15.4 0.4 1.6 1 0 0 1 1 1 1 Iguana/Dzip1-like DAZ-interacting protein N-terminal YabA PF06156.13 gi|452208776|ref|YP_007488890.1| - 2.2 9.0 5.0 15 6.3 0.2 2.5 2 0 0 2 2 2 0 Initiation control protein YabA AlbA_2 PF04326.14 gi|452208777|ref|YP_007488891.1| - 6.6e-08 32.9 0.1 7.7e-08 32.7 0.1 1.1 1 0 0 1 1 1 1 Putative DNA-binding domain AlbA_2 PF04326.14 gi|452208778|ref|YP_007488892.1| - 3e-05 24.4 0.0 3.1e-05 24.3 0.0 1.0 1 0 0 1 1 1 1 Putative DNA-binding domain HATPase_c_4 PF13749.6 gi|452208779|ref|YP_007488893.1| - 1.4e-25 89.2 0.0 2.3e-25 88.5 0.0 1.3 1 0 0 1 1 1 1 Putative ATP-dependent DNA helicase recG C-terminal HTH_45 PF14947.6 gi|452208779|ref|YP_007488893.1| - 0.0047 16.9 0.0 0.01 15.8 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_34 PF13601.6 gi|452208779|ref|YP_007488893.1| - 0.0065 16.6 0.1 0.012 15.8 0.1 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain DUF4423 PF14394.6 gi|452208779|ref|YP_007488893.1| - 0.017 14.8 0.1 0.025 14.3 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) PadR PF03551.14 gi|452208779|ref|YP_007488893.1| - 0.034 14.1 0.0 0.076 13.0 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family HTH_27 PF13463.6 gi|452208779|ref|YP_007488893.1| - 0.11 13.1 0.0 0.17 12.4 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_45 PF14947.6 gi|452208780|ref|YP_007488894.1| - 0.00062 19.7 0.0 0.0013 18.7 0.0 1.5 1 1 0 1 1 1 1 Winged helix-turn-helix PadR PF03551.14 gi|452208780|ref|YP_007488894.1| - 0.017 15.1 0.0 0.03 14.3 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family BsuBI_PstI_RE_N PF17728.1 gi|452208780|ref|YP_007488894.1| - 0.074 12.9 0.0 0.088 12.7 0.0 1.3 1 0 0 1 1 1 0 BsuBI/PstI restriction endonuclease HTH domain Mrr_N PF14338.6 gi|452208782|ref|YP_007488896.1| - 4.9e-05 23.4 0.0 0.0001 22.4 0.0 1.6 1 0 0 1 1 1 1 Mrr N-terminal domain HicA_toxin PF07927.12 gi|452208783|ref|YP_007488897.1| - 3e-18 65.6 0.1 4.1e-18 65.2 0.1 1.2 1 0 0 1 1 1 1 HicA toxin of bacterial toxin-antitoxin, BRX_N PF13713.6 gi|452208783|ref|YP_007488897.1| - 0.082 12.7 0.4 0.25 11.1 0.0 2.0 2 0 0 2 2 2 0 Transcription factor BRX N-terminal domain HicB_lk_antitox PF15919.5 gi|452208784|ref|YP_007488898.1| - 3.9e-06 27.0 0.1 4.3e-06 26.9 0.1 1.1 1 0 0 1 1 1 1 HicB_like antitoxin of bacterial toxin-antitoxin system PHD_like PF12910.7 gi|452208784|ref|YP_007488898.1| - 0.00092 19.3 0.1 0.0014 18.7 0.0 1.3 1 1 0 1 1 1 1 Antitoxin of toxin-antitoxin, RelE / RelB, TA system TPR_11 PF13414.6 gi|452208784|ref|YP_007488898.1| - 0.039 13.6 0.3 0.06 13.0 0.3 1.3 1 0 0 1 1 1 0 TPR repeat ATPase_2 PF01637.18 gi|452208785|ref|YP_007488899.1| - 1.8e-19 70.6 4.4 1.3e-18 67.8 0.8 2.9 2 1 0 2 2 2 1 ATPase domain predominantly from Archaea DUF234 PF03008.14 gi|452208785|ref|YP_007488899.1| - 8.5e-19 67.9 0.1 9.2e-18 64.5 0.2 2.6 3 0 0 3 3 3 1 Archaea bacterial proteins of unknown function AAA_14 PF13173.6 gi|452208785|ref|YP_007488899.1| - 5.3e-12 45.9 0.5 1.2e-11 44.8 0.2 1.8 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|452208785|ref|YP_007488899.1| - 3.8e-05 24.2 0.2 0.0025 18.2 0.1 2.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|452208785|ref|YP_007488899.1| - 4.6e-05 23.7 0.0 0.00011 22.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain DUF4143 PF13635.6 gi|452208785|ref|YP_007488899.1| - 0.00071 19.7 0.0 0.0018 18.4 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4143) HTH_5 PF01022.20 gi|452208785|ref|YP_007488899.1| - 0.012 15.5 0.1 0.031 14.1 0.1 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family TniB PF05621.11 gi|452208785|ref|YP_007488899.1| - 0.055 12.9 0.0 0.13 11.7 0.0 1.6 1 0 0 1 1 1 0 Bacterial TniB protein HTH_24 PF13412.6 gi|452208785|ref|YP_007488899.1| - 0.083 12.5 0.1 0.39 10.3 0.1 2.1 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding PglZ PF08665.12 gi|452208786|ref|YP_007488900.1| - 4e-60 202.9 0.2 1.1e-59 201.5 0.2 1.8 1 0 0 1 1 1 1 PglZ domain Phosphodiest PF01663.22 gi|452208786|ref|YP_007488900.1| - 0.03 13.9 0.9 0.088 12.4 0.0 2.1 2 1 0 2 2 2 0 Type I phosphodiesterase / nucleotide pyrophosphatase YafO_toxin PF13957.6 gi|452208786|ref|YP_007488900.1| - 0.048 13.7 0.7 0.23 11.5 0.1 2.4 2 0 0 2 2 2 0 Toxin YafO, type II toxin-antitoxin system Lon_2 PF13337.6 gi|452208787|ref|YP_007488901.1| - 7.2e-161 535.8 0.1 8.5e-161 535.5 0.1 1.0 1 0 0 1 1 1 1 Putative ATP-dependent Lon protease Sacchrp_dh_NADP PF03435.18 gi|452208788|ref|YP_007488902.1| - 4.3e-27 94.9 0.0 1.2e-26 93.5 0.0 1.8 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain Sacchrp_dh_C PF16653.5 gi|452208788|ref|YP_007488902.1| - 3.4e-24 86.4 0.0 5.8e-24 85.6 0.0 1.3 1 0 0 1 1 1 1 Saccharopine dehydrogenase C-terminal domain Cation_efflux PF01545.21 gi|452208789|ref|YP_007488903.1| - 6e-39 133.8 10.1 7.6e-39 133.5 10.1 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|452208789|ref|YP_007488903.1| - 2.5e-18 66.0 0.3 2.5e-18 66.0 0.3 1.9 2 0 0 2 2 2 1 Dimerisation domain of Zinc Transporter Cation_ATPase_C PF00689.21 gi|452208789|ref|YP_007488903.1| - 3 7.5 7.1 2.2 8.0 2.6 2.2 1 1 1 2 2 2 0 Cation transporting ATPase, C-terminus PAS_4 PF08448.10 gi|452208790|ref|YP_007488904.1| - 6.1e-81 267.9 0.0 3.8e-23 81.8 0.0 8.5 8 0 0 8 8 8 6 PAS fold PAS_9 PF13426.7 gi|452208790|ref|YP_007488904.1| - 3.5e-78 258.5 4.0 4.8e-16 58.9 0.0 8.9 9 1 0 9 9 9 7 PAS domain PAS PF00989.25 gi|452208790|ref|YP_007488904.1| - 2.2e-74 246.7 0.1 6.1e-17 61.7 0.0 9.0 9 0 0 9 9 9 7 PAS fold PAS_3 PF08447.12 gi|452208790|ref|YP_007488904.1| - 9.6e-52 173.2 0.4 4.9e-16 58.8 0.0 7.9 8 0 0 8 8 7 6 PAS fold PAS_8 PF13188.7 gi|452208790|ref|YP_007488904.1| - 4.3e-38 128.7 0.0 8.9e-09 35.2 0.0 7.5 7 0 0 7 7 7 6 PAS domain HisKA_2 PF07568.12 gi|452208790|ref|YP_007488904.1| - 9.4e-33 112.2 0.3 5.3e-32 109.7 0.3 2.5 1 0 0 1 1 1 1 Histidine kinase GAF_2 PF13185.6 gi|452208790|ref|YP_007488904.1| - 1.8e-29 102.8 0.0 3e-17 63.2 0.0 4.3 4 1 0 4 4 3 2 GAF domain PAS_7 PF12860.7 gi|452208790|ref|YP_007488904.1| - 1.5e-14 54.2 7.0 0.15 12.2 0.0 9.2 9 2 0 9 9 8 4 PAS fold PAS_10 PF13596.6 gi|452208790|ref|YP_007488904.1| - 1.8e-10 41.3 0.1 0.00012 22.7 0.0 5.1 6 0 0 6 6 4 2 PAS domain HATPase_c PF02518.26 gi|452208790|ref|YP_007488904.1| - 5.1e-09 36.6 0.1 2.7e-08 34.3 0.1 2.3 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GAF_3 PF13492.6 gi|452208790|ref|YP_007488904.1| - 2.5e-06 27.9 0.1 0.045 14.1 0.0 4.1 4 1 0 4 4 4 2 GAF domain HATPase_c_2 PF13581.6 gi|452208790|ref|YP_007488904.1| - 1.4e-05 25.0 0.0 3.7e-05 23.7 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain GAF PF01590.26 gi|452208790|ref|YP_007488904.1| - 0.00016 22.3 0.0 0.00092 19.9 0.0 2.3 2 0 0 2 2 2 1 GAF domain HWE_HK PF07536.14 gi|452208790|ref|YP_007488904.1| - 0.00056 20.6 0.0 0.0027 18.4 0.1 2.3 2 0 0 2 2 1 1 HWE histidine kinase MEKHLA PF08670.11 gi|452208790|ref|YP_007488904.1| - 0.014 15.3 0.1 0.32 10.9 0.0 3.0 2 1 1 3 3 3 0 MEKHLA domain DUF3932 PF13068.6 gi|452208790|ref|YP_007488904.1| - 0.1 12.9 0.0 0.54 10.6 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3932) DUF2959 PF11172.8 gi|452208790|ref|YP_007488904.1| - 0.49 10.5 4.7 0.25 11.4 0.1 2.9 4 0 0 4 4 3 0 Protein of unknown function (DUF2959) PAS_3 PF08447.12 gi|452208791|ref|YP_007488905.1| - 2.2e-44 149.7 0.6 3e-15 56.3 0.1 5.1 4 1 0 4 4 4 4 PAS fold HisKA_2 PF07568.12 gi|452208791|ref|YP_007488905.1| - 1.3e-33 114.9 6.6 1.4e-33 114.8 0.9 3.4 3 0 0 3 3 3 1 Histidine kinase PAS_4 PF08448.10 gi|452208791|ref|YP_007488905.1| - 4.7e-27 94.4 0.3 1.9e-10 40.9 0.0 5.1 4 1 0 4 4 4 3 PAS fold PAS PF00989.25 gi|452208791|ref|YP_007488905.1| - 4.8e-18 65.2 0.1 0.0018 18.2 0.1 5.7 5 1 0 5 5 5 4 PAS fold PAS_9 PF13426.7 gi|452208791|ref|YP_007488905.1| - 1.2e-16 60.8 0.0 2.7e-07 30.8 0.0 5.6 5 1 0 5 5 5 3 PAS domain PAS_7 PF12860.7 gi|452208791|ref|YP_007488905.1| - 3.8e-08 33.5 0.2 7.8e-06 26.0 0.0 3.8 3 1 0 3 3 3 1 PAS fold HATPase_c PF02518.26 gi|452208791|ref|YP_007488905.1| - 4.3e-06 27.2 0.1 1.6e-05 25.3 0.1 2.0 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HWE_HK PF07536.14 gi|452208791|ref|YP_007488905.1| - 0.00011 22.8 1.0 0.00082 20.0 0.2 2.7 2 0 0 2 2 2 1 HWE histidine kinase PAS_8 PF13188.7 gi|452208791|ref|YP_007488905.1| - 0.0056 16.7 0.1 0.044 13.8 0.0 2.6 2 0 0 2 2 2 1 PAS domain HATPase_c_2 PF13581.6 gi|452208791|ref|YP_007488905.1| - 0.0063 16.5 0.0 0.017 15.1 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain NAT PF04768.13 gi|452208791|ref|YP_007488905.1| - 0.0097 15.6 0.0 0.05 13.3 0.0 2.2 2 0 0 2 2 2 1 NAT, N-acetyltransferase, of N-acetylglutamate synthase SPOB_a PF14689.6 gi|452208791|ref|YP_007488905.1| - 0.081 12.6 0.0 0.38 10.5 0.0 2.2 1 0 0 1 1 1 0 Sensor_kinase_SpoOB-type, alpha-helical domain PAS_10 PF13596.6 gi|452208791|ref|YP_007488905.1| - 0.081 13.5 0.5 24 5.6 0.0 4.2 4 1 0 4 4 4 0 PAS domain BLYB PF05289.11 gi|452208791|ref|YP_007488905.1| - 0.81 9.9 7.7 0.09 13.0 3.0 1.8 2 0 0 2 2 2 0 Borrelia hemolysin accessory protein ATP-synt_DE PF00401.20 gi|452208791|ref|YP_007488905.1| - 0.86 9.9 9.5 9.4 6.6 0.7 3.5 3 0 0 3 3 3 0 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HTH_32 PF13565.6 gi|452208792|ref|YP_007488906.1| - 1.4e-11 44.8 0.0 1.5e-11 44.7 0.0 1.0 1 0 0 1 1 1 1 Homeodomain-like domain PocR PF10114.9 gi|452208793|ref|YP_007488907.1| - 3.1e-49 166.9 0.0 5.1e-49 166.2 0.0 1.4 1 0 0 1 1 1 1 Sensory domain found in PocR PAS_9 PF13426.7 gi|452208793|ref|YP_007488907.1| - 4.4e-22 78.3 0.0 3.6e-16 59.3 0.0 3.1 2 0 0 2 2 2 2 PAS domain PAS_4 PF08448.10 gi|452208793|ref|YP_007488907.1| - 3.4e-21 75.5 0.0 7.7e-12 45.4 0.0 2.7 3 0 0 3 3 3 2 PAS fold PAS PF00989.25 gi|452208793|ref|YP_007488907.1| - 1.9e-20 73.0 0.0 1.1e-13 51.1 0.0 3.6 3 0 0 3 3 3 2 PAS fold PAS_3 PF08447.12 gi|452208793|ref|YP_007488907.1| - 1.8e-09 37.7 0.0 4.7e-06 26.8 0.0 2.7 2 0 0 2 2 2 2 PAS fold PAS_8 PF13188.7 gi|452208793|ref|YP_007488907.1| - 3.4e-08 33.3 0.0 8.4e-07 28.9 0.0 3.1 4 0 0 4 4 4 1 PAS domain CbiZ PF01955.18 gi|452208794|ref|YP_007488908.1| - 3e-37 128.6 0.1 3.7e-37 128.3 0.1 1.1 1 0 0 1 1 1 1 Adenosylcobinamide amidohydrolase B12-binding PF02310.19 gi|452208795|ref|YP_007488909.1| - 1.4e-19 70.3 0.5 2.5e-19 69.5 0.5 1.5 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|452208795|ref|YP_007488909.1| - 2e-15 56.9 0.5 9.5e-15 54.8 0.1 2.1 2 1 0 2 2 2 1 B12 binding domain UPF0180 PF03698.13 gi|452208795|ref|YP_007488909.1| - 0.0075 16.4 0.0 0.22 11.7 0.0 2.9 3 0 0 3 3 3 1 Uncharacterised protein family (UPF0180) Mut7-C PF01927.16 gi|452208795|ref|YP_007488909.1| - 0.1 12.7 0.0 0.18 11.9 0.0 1.3 1 0 0 1 1 1 0 Mut7-C RNAse domain MtaB PF12176.8 gi|452208796|ref|YP_007488910.1| - 3.3e-230 764.6 7.4 3.7e-230 764.5 7.4 1.0 1 0 0 1 1 1 1 Methanol-cobalamin methyltransferase B subunit Macro PF01661.21 gi|452208797|ref|YP_007488911.1| - 1.4e-45 154.2 0.0 2e-45 153.7 0.0 1.2 1 0 0 1 1 1 1 Macro domain DUF3303 PF11746.8 gi|452208798|ref|YP_007488912.1| - 0.00026 21.2 0.0 0.00043 20.5 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3303) GYD PF08734.11 gi|452208798|ref|YP_007488912.1| - 0.053 13.5 0.3 0.11 12.4 0.0 1.7 2 0 0 2 2 2 0 GYD domain Acetyltransf_1 PF00583.25 gi|452208799|ref|YP_007488913.1| - 2.6e-18 66.3 0.1 3.3e-18 66.0 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|452208799|ref|YP_007488913.1| - 2.9e-10 40.4 0.0 4.4e-10 39.9 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|452208799|ref|YP_007488913.1| - 2.2e-09 37.3 0.0 2.9e-09 36.9 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|452208799|ref|YP_007488913.1| - 0.00014 21.9 0.0 0.00024 21.2 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_4 PF13420.7 gi|452208799|ref|YP_007488913.1| - 0.013 15.6 0.0 0.017 15.3 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.7 gi|452208799|ref|YP_007488913.1| - 0.017 15.3 0.0 0.021 15.0 0.0 1.3 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|452208799|ref|YP_007488913.1| - 0.029 14.3 0.0 0.12 12.4 0.0 1.8 2 0 0 2 2 2 0 FR47-like protein Acetyltransf_15 PF17013.5 gi|452208799|ref|YP_007488913.1| - 0.049 13.1 0.0 0.049 13.1 0.0 1.2 1 0 0 1 1 1 0 Putative acetyl-transferase DUF1073 PF06381.11 gi|452208800|ref|YP_007488914.1| - 0.094 11.5 2.1 0.1 11.4 2.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1073) DUF2156 PF09924.9 gi|452208802|ref|YP_007488916.1| - 3.8e-45 154.2 0.0 4.3e-45 154.0 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised conserved protein (DUF2156) ThiC_Rad_SAM PF01964.18 gi|452208803|ref|YP_007488917.1| - 4.6e-175 582.4 0.1 5.2e-175 582.2 0.1 1.0 1 0 0 1 1 1 1 Radical SAM ThiC family TFX_C PF14601.6 gi|452208803|ref|YP_007488917.1| - 0.055 13.4 0.1 1.3 9.0 0.1 2.5 1 1 0 1 1 1 0 DNA_binding protein, TFX, C-term Adhesin_Dr PF04619.12 gi|452208803|ref|YP_007488917.1| - 0.066 13.1 0.0 0.16 11.9 0.0 1.6 1 0 0 1 1 1 0 Dr-family adhesin Topoisom_bac PF01131.20 gi|452208804|ref|YP_007488918.1| - 1.9e-108 363.2 0.0 2.5e-108 362.8 0.0 1.1 1 0 0 1 1 1 1 DNA topoisomerase Toprim PF01751.22 gi|452208804|ref|YP_007488918.1| - 6.9e-16 58.3 0.2 1.4e-14 54.1 0.0 2.8 3 0 0 3 3 3 1 Toprim domain zf-C4_Topoisom PF01396.19 gi|452208804|ref|YP_007488918.1| - 6.6e-14 51.4 10.8 8.2e-09 35.1 0.4 3.6 3 0 0 3 3 3 2 Topoisomerase DNA binding C4 zinc finger OEP PF02321.18 gi|452208804|ref|YP_007488918.1| - 0.0025 17.7 0.0 0.0054 16.6 0.0 1.5 1 0 0 1 1 1 1 Outer membrane efflux protein Auto_anti-p27 PF06677.12 gi|452208804|ref|YP_007488918.1| - 0.065 13.4 0.1 0.065 13.4 0.1 2.6 3 0 0 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Toprim_2 PF13155.6 gi|452208804|ref|YP_007488918.1| - 0.11 13.0 0.1 0.37 11.3 0.1 1.9 1 1 0 1 1 1 0 Toprim-like ABC_tran_CTD PF16326.5 gi|452208804|ref|YP_007488918.1| - 0.41 10.9 2.0 1.7 8.9 2.0 2.1 1 0 0 1 1 1 0 ABC transporter C-terminal domain DUF1451 PF07295.11 gi|452208804|ref|YP_007488918.1| - 1.3 9.1 8.9 0.22 11.5 0.6 3.1 3 0 0 3 3 3 0 Zinc-ribbon containing domain Ribosomal_S3Ae PF01015.18 gi|452208805|ref|YP_007488919.1| - 4.6e-64 215.7 3.7 5.3e-64 215.5 3.7 1.0 1 0 0 1 1 1 1 Ribosomal S3Ae family UPF0547 PF10571.9 gi|452208806|ref|YP_007488920.1| - 0.2 11.8 2.3 0.46 10.6 0.6 2.0 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 adh_short_C2 PF13561.6 gi|452208808|ref|YP_007488922.1| - 2.2e-65 220.5 0.9 2.5e-65 220.3 0.9 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|452208808|ref|YP_007488922.1| - 1.6e-57 194.2 2.0 1.9e-57 193.9 2.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|452208808|ref|YP_007488922.1| - 2.2e-15 57.0 0.4 2.9e-15 56.6 0.4 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|452208808|ref|YP_007488922.1| - 2.4e-05 23.9 0.1 3.2e-05 23.5 0.1 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.15 gi|452208808|ref|YP_007488922.1| - 3e-05 23.3 0.2 4e-05 22.9 0.2 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 gi|452208808|ref|YP_007488922.1| - 8.7e-05 22.5 0.1 0.00011 22.1 0.1 1.2 1 0 0 1 1 1 1 NAD(P)H-binding Glyco_trans_4_2 PF13477.6 gi|452208808|ref|YP_007488922.1| - 0.0094 16.0 0.0 0.027 14.5 0.0 1.8 1 1 1 2 2 2 1 Glycosyl transferase 4-like DFP PF04127.15 gi|452208808|ref|YP_007488922.1| - 0.012 15.4 0.1 0.025 14.4 0.1 1.5 1 0 0 1 1 1 0 DNA / pantothenate metabolism flavoprotein Pyr_redox PF00070.27 gi|452208808|ref|YP_007488922.1| - 0.013 16.1 0.1 0.013 16.1 0.1 2.2 3 0 0 3 3 2 0 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 gi|452208808|ref|YP_007488922.1| - 0.037 13.9 0.8 0.057 13.3 0.2 1.7 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3Beta_HSD PF01073.19 gi|452208808|ref|YP_007488922.1| - 0.046 12.7 0.3 0.061 12.3 0.3 1.2 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family Pyr_redox_2 PF07992.14 gi|452208808|ref|YP_007488922.1| - 0.063 12.5 1.3 0.079 12.2 0.6 1.5 1 1 1 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase LpxI_N PF17930.1 gi|452208808|ref|YP_007488922.1| - 0.079 12.9 0.2 0.3 11.0 0.1 2.0 2 0 0 2 2 2 0 LpxI N-terminal domain RmlD_sub_bind PF04321.17 gi|452208808|ref|YP_007488922.1| - 0.08 12.0 0.1 0.12 11.4 0.1 1.3 1 0 0 1 1 1 0 RmlD substrate binding domain Glyco_transf_5 PF08323.11 gi|452208808|ref|YP_007488922.1| - 0.11 12.2 0.0 2.1 8.0 0.0 2.1 2 0 0 2 2 2 0 Starch synthase catalytic domain NmrA PF05368.13 gi|452208808|ref|YP_007488922.1| - 0.11 12.0 0.7 0.18 11.3 0.7 1.3 1 0 0 1 1 1 0 NmrA-like family NTP_transf_2 PF01909.23 gi|452208809|ref|YP_007488923.1| - 1.2e-12 47.9 0.2 1.3e-12 47.8 0.2 1.0 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|452208809|ref|YP_007488923.1| - 6.7e-10 38.9 0.0 8.5e-10 38.6 0.0 1.0 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase DNA_pol_B_palm PF14792.6 gi|452208809|ref|YP_007488923.1| - 0.022 15.0 0.0 0.022 15.0 0.0 1.2 1 0 0 1 1 1 0 DNA polymerase beta palm Ribosomal_L12_N PF16320.5 gi|452208809|ref|YP_007488923.1| - 0.094 12.4 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L7/L12 dimerisation domain GYD PF08734.11 gi|452208811|ref|YP_007488925.1| - 1.2e-05 25.2 0.0 1.2e-05 25.1 0.0 1.0 1 0 0 1 1 1 1 GYD domain PDDEXK_1 PF12705.7 gi|452208814|ref|YP_007488928.1| - 1.4e-08 35.0 0.2 1.5e-08 34.9 0.2 1.0 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily Cas_Cas4 PF01930.17 gi|452208814|ref|YP_007488928.1| - 3.4e-08 33.7 1.9 4.2e-08 33.5 1.9 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF83 DUF2800 PF10926.8 gi|452208814|ref|YP_007488928.1| - 3e-05 23.5 0.3 3.6e-05 23.2 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2800) DUF4891 PF16232.5 gi|452208814|ref|YP_007488928.1| - 0.01 16.3 0.7 0.015 15.8 0.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4891) Lipin_N PF04571.14 gi|452208814|ref|YP_007488928.1| - 0.054 13.5 0.1 0.086 12.8 0.1 1.5 1 1 0 1 1 1 0 lipin, N-terminal conserved region GTP_EFTU_D4 PF14578.6 gi|452208814|ref|YP_007488928.1| - 0.16 11.9 1.5 0.21 11.5 1.2 1.4 1 1 0 1 1 1 0 Elongation factor Tu domain 4 Nmad3 PF18754.1 gi|452208815|ref|YP_007488929.1| - 5.7e-05 22.8 0.0 5.8e-05 22.8 0.0 1.0 1 0 0 1 1 1 1 Nucleotide modification associated domain 3 DUF1627 PF07789.12 gi|452208819|ref|YP_007488933.1| - 0.22 11.2 0.0 0.22 11.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1627) AlbA_2 PF04326.14 gi|452208821|ref|YP_007488935.1| - 3.9e-16 59.5 0.1 6.1e-16 58.9 0.1 1.3 1 0 0 1 1 1 1 Putative DNA-binding domain DUF2497 PF10691.9 gi|452208821|ref|YP_007488935.1| - 0.1 13.0 0.2 2.3 8.7 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2497) DUF2129 PF09902.9 gi|452208822|ref|YP_007488936.1| - 0.086 12.9 0.0 0.086 12.9 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2129) DUF538 PF04398.12 gi|452208823|ref|YP_007488937.1| - 0.079 13.4 0.0 0.085 13.3 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function, DUF538 Pcc1 PF09341.10 gi|452208824|ref|YP_007488938.1| - 0.0085 16.2 0.0 0.011 15.8 0.0 1.2 1 0 0 1 1 1 1 Transcription factor Pcc1 DHHA1 PF02272.19 gi|452208826|ref|YP_007488940.1| - 8e-14 52.2 0.4 2.6e-13 50.6 0.1 2.1 2 0 0 2 2 2 1 DHHA1 domain DHH PF01368.20 gi|452208826|ref|YP_007488940.1| - 0.00027 21.1 0.2 0.0009 19.4 0.1 1.8 2 0 0 2 2 2 1 DHH family Lactonase PF10282.9 gi|452208827|ref|YP_007488941.1| - 2.3e-15 56.7 9.2 6.8e-07 28.9 0.4 4.1 1 1 2 3 3 3 3 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.16 gi|452208827|ref|YP_007488941.1| - 5.4e-11 41.6 8.3 3.3e-06 25.9 1.0 3.2 1 1 1 3 3 3 3 Cytochrome D1 heme domain SGL PF08450.12 gi|452208827|ref|YP_007488941.1| - 8.8e-08 32.0 10.6 0.0018 17.9 1.0 4.1 1 1 4 5 5 5 5 SMP-30/Gluconolactonase/LRE-like region Arylesterase PF01731.20 gi|452208827|ref|YP_007488941.1| - 1.2e-07 31.8 9.4 5.7 7.2 0.1 6.3 1 1 4 6 6 6 4 Arylesterase PD40 PF07676.12 gi|452208827|ref|YP_007488941.1| - 4.9e-06 26.3 0.0 60 3.7 0.0 6.2 6 0 0 6 6 6 0 WD40-like Beta Propeller Repeat NHL PF01436.21 gi|452208827|ref|YP_007488941.1| - 1.4e-05 24.9 20.9 1 9.5 0.1 7.8 7 0 0 7 7 7 1 NHL repeat P_proprotein PF01483.20 gi|452208827|ref|YP_007488941.1| - 0.0014 18.6 2.1 21 5.2 0.0 5.3 4 1 2 6 6 6 0 Proprotein convertase P-domain Bac_rhamnosid_C PF17390.2 gi|452208827|ref|YP_007488941.1| - 0.011 15.5 0.0 0.041 13.7 0.0 2.0 1 0 0 1 1 1 0 Bacterial alpha-L-rhamnosidase C-terminal domain Arm-DNA-bind_3 PF13356.6 gi|452208827|ref|YP_007488941.1| - 0.02 15.2 0.0 59 4.1 0.0 5.0 1 1 1 2 2 2 0 Arm DNA-binding domain HSP9_HSP12 PF04119.12 gi|452208827|ref|YP_007488941.1| - 0.033 14.6 0.0 2.3 8.7 0.0 3.6 4 0 0 4 4 4 0 Heat shock protein 9/12 DUF1513 PF07433.11 gi|452208827|ref|YP_007488941.1| - 0.054 12.6 3.6 21 4.0 0.0 3.4 2 1 0 3 3 3 0 Protein of unknown function (DUF1513) PAS_2 PF08446.11 gi|452208827|ref|YP_007488941.1| - 0.086 13.5 0.0 12 6.7 0.0 3.5 1 1 2 3 3 3 0 PAS fold BatD PF13584.6 gi|452208828|ref|YP_007488942.1| - 0.0011 17.8 0.1 0.0016 17.4 0.1 1.1 1 0 0 1 1 1 1 Oxygen tolerance Invasin_D3 PF09134.10 gi|452208829|ref|YP_007488943.1| - 9.5e-07 29.0 4.5 7.2e-06 26.2 0.6 3.0 3 0 0 3 3 3 1 Invasin, domain 3 He_PIG PF05345.12 gi|452208829|ref|YP_007488943.1| - 0.0019 18.3 0.9 0.011 15.9 0.1 2.5 3 0 0 3 3 3 1 Putative Ig domain Big_1 PF02369.16 gi|452208829|ref|YP_007488943.1| - 0.029 14.4 1.0 0.31 11.1 0.2 2.7 1 1 1 2 2 2 0 Bacterial Ig-like domain (group 1) FlgD_ig PF13860.6 gi|452208829|ref|YP_007488943.1| - 0.035 14.0 0.2 0.35 10.8 0.1 2.6 2 1 0 2 2 2 0 FlgD Ig-like domain Big_6 PF17936.1 gi|452208829|ref|YP_007488943.1| - 0.054 13.8 1.1 0.73 10.1 0.2 2.3 2 0 0 2 2 2 0 Bacterial Ig domain PGF-CTERM PF18204.1 gi|452208830|ref|YP_007488944.1| - 0.049 13.6 0.5 0.1 12.6 0.5 1.5 1 0 0 1 1 1 0 PGF-CTERM motif Big_3_4 PF13754.6 gi|452208831|ref|YP_007488945.1| - 0.0025 17.5 0.5 1.4 8.7 0.0 3.1 3 0 0 3 3 3 2 Domain of unknown function YbbR PF07949.12 gi|452208831|ref|YP_007488945.1| - 0.11 12.8 0.0 0.38 11.1 0.0 1.8 1 0 0 1 1 1 0 YbbR-like protein Big_3_2 PF12245.8 gi|452208831|ref|YP_007488945.1| - 0.13 12.6 0.4 32 4.8 0.0 3.8 3 1 1 4 4 4 0 Bacterial Ig-like domain COG2 PF06148.11 gi|452208832|ref|YP_007488946.1| - 0.0002 21.4 0.1 0.00045 20.3 0.1 1.6 1 0 0 1 1 1 1 COG (conserved oligomeric Golgi) complex component, COG2 Gla PF00594.20 gi|452208832|ref|YP_007488946.1| - 0.053 13.7 3.7 0.33 11.2 0.8 2.7 2 0 0 2 2 2 0 Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain DUF2963 PF11178.8 gi|452208832|ref|YP_007488946.1| - 0.081 12.6 2.4 0.33 10.7 2.4 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2963) DUF5418 PF17439.2 gi|452208833|ref|YP_007488947.1| - 0.035 14.2 0.0 0.038 14.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5418) Thi4 PF01946.17 gi|452208834|ref|YP_007488948.1| - 3.9e-74 248.8 0.2 4.5e-74 248.6 0.2 1.0 1 0 0 1 1 1 1 Thi4 family Pyr_redox_2 PF07992.14 gi|452208834|ref|YP_007488948.1| - 2.5e-06 27.0 0.1 3.1e-06 26.6 0.1 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|452208834|ref|YP_007488948.1| - 3.2e-06 26.8 0.5 4.6e-06 26.2 0.5 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|452208834|ref|YP_007488948.1| - 1.1e-05 25.6 0.4 2.8e-05 24.2 0.4 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 gi|452208834|ref|YP_007488948.1| - 5.7e-05 22.4 3.0 0.00023 20.4 1.1 2.1 2 0 0 2 2 2 1 FAD binding domain HI0933_like PF03486.14 gi|452208834|ref|YP_007488948.1| - 0.00058 18.7 0.1 0.00078 18.2 0.1 1.3 1 0 0 1 1 1 1 HI0933-like protein FAD_binding_3 PF01494.19 gi|452208834|ref|YP_007488948.1| - 0.0013 18.1 0.2 0.0019 17.5 0.2 1.2 1 0 0 1 1 1 1 FAD binding domain GIDA PF01134.22 gi|452208834|ref|YP_007488948.1| - 0.034 13.2 0.8 0.053 12.6 0.8 1.2 1 0 0 1 1 1 0 Glucose inhibited division protein A DAO PF01266.24 gi|452208834|ref|YP_007488948.1| - 0.058 13.0 2.0 0.28 10.7 0.9 2.1 1 1 1 2 2 2 0 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 gi|452208834|ref|YP_007488948.1| - 0.1 11.6 0.2 0.17 10.9 0.2 1.3 1 0 0 1 1 1 0 Lycopene cyclase protein Pyr_redox PF00070.27 gi|452208834|ref|YP_007488948.1| - 0.11 13.0 0.3 0.29 11.7 0.3 1.7 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 gi|452208834|ref|YP_007488948.1| - 0.12 11.7 0.1 0.21 10.8 0.1 1.3 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase DUF1482 PF07358.11 gi|452208834|ref|YP_007488948.1| - 0.13 12.2 0.0 0.26 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1482) MCRA PF06100.11 gi|452208834|ref|YP_007488948.1| - 0.16 10.7 0.1 0.2 10.4 0.1 1.2 1 0 0 1 1 1 0 MCRA family META PF03724.16 gi|452208836|ref|YP_007488950.1| - 8.8e-15 54.6 0.0 1.3e-14 54.0 0.0 1.3 1 0 0 1 1 1 1 META domain DUF5640 PF18692.1 gi|452208836|ref|YP_007488950.1| - 7.4e-05 22.7 0.0 0.00014 21.8 0.0 1.4 1 0 0 1 1 1 1 Family of unknown function (DUF5640) Lipocalin_4 PF13648.6 gi|452208836|ref|YP_007488950.1| - 0.014 16.4 0.1 0.027 15.5 0.1 1.5 1 0 0 1 1 1 0 Lipocalin-like domain TOBE PF03459.17 gi|452208838|ref|YP_007488952.1| - 2.6e-19 69.3 0.1 2.8e-19 69.1 0.1 1.0 1 0 0 1 1 1 1 TOBE domain TOBE_2 PF08402.10 gi|452208838|ref|YP_007488952.1| - 0.033 14.4 0.0 0.036 14.2 0.0 1.1 1 0 0 1 1 1 0 TOBE domain Trypan_PARP PF05887.11 gi|452208839|ref|YP_007488953.1| - 0.0037 17.2 21.8 0.0041 17.1 21.8 1.2 1 0 0 1 1 1 1 Procyclic acidic repetitive protein (PARP) TonB_N PF16031.5 gi|452208839|ref|YP_007488953.1| - 0.48 11.0 23.5 0.47 11.0 23.5 1.0 1 0 0 1 1 1 0 TonB polyproline region TIR_2 PF13676.6 gi|452208840|ref|YP_007488954.1| - 1.9e-07 31.7 0.0 3.1e-07 31.0 0.0 1.4 1 0 0 1 1 1 1 TIR domain CpXC PF14353.6 gi|452208840|ref|YP_007488954.1| - 0.0047 17.0 0.7 0.036 14.1 0.9 2.1 1 1 1 2 2 2 2 CpXC protein zf-ribbon_3 PF13248.6 gi|452208840|ref|YP_007488954.1| - 0.014 14.8 1.5 0.35 10.3 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Cys_rich_CPXG PF14255.6 gi|452208840|ref|YP_007488954.1| - 0.028 14.3 2.5 0.068 13.1 0.2 2.2 2 0 0 2 2 2 0 Cysteine-rich CPXCG DZR PF12773.7 gi|452208840|ref|YP_007488954.1| - 0.035 14.1 0.1 0.059 13.4 0.1 1.3 1 0 0 1 1 1 0 Double zinc ribbon PyrI_C PF02748.15 gi|452208840|ref|YP_007488954.1| - 0.058 13.3 4.2 0.75 9.7 0.3 2.2 1 1 1 2 2 2 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain Mu-like_Com PF10122.9 gi|452208840|ref|YP_007488954.1| - 0.067 12.7 0.1 0.18 11.3 0.1 1.7 1 0 0 1 1 1 0 Mu-like prophage protein Com zf-BED PF02892.15 gi|452208840|ref|YP_007488954.1| - 0.088 12.8 4.6 1.2 9.3 0.1 2.7 2 1 1 3 3 3 0 BED zinc finger zf-C2H2_10 PF16588.5 gi|452208840|ref|YP_007488954.1| - 0.38 10.5 5.1 7.5 6.4 0.5 2.2 2 0 0 2 2 2 0 C2H2 zinc-finger TF_Zn_Ribbon PF08271.12 gi|452208840|ref|YP_007488954.1| - 0.4 10.2 2.3 1.3 8.6 2.2 1.9 1 1 0 1 1 1 0 TFIIB zinc-binding zf-Di19 PF05605.12 gi|452208840|ref|YP_007488954.1| - 0.45 10.8 3.3 3.5 8.0 3.3 2.2 1 1 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding zinc_ribbon_2 PF13240.6 gi|452208840|ref|YP_007488954.1| - 0.87 9.4 3.9 1.3 8.8 0.4 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Zn_ribbon_SprT PF17283.2 gi|452208842|ref|YP_007488956.1| - 0.0011 18.8 1.2 0.0015 18.4 1.2 1.2 1 0 0 1 1 1 1 SprT-like zinc ribbon domain DUF2795 PF11387.8 gi|452208843|ref|YP_007488957.1| - 7.6e-19 67.7 0.1 9.5e-19 67.3 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2795) DDE_Tnp_2 PF04693.12 gi|452208843|ref|YP_007488957.1| - 0.1 11.8 0.0 0.12 11.6 0.0 1.0 1 0 0 1 1 1 0 Archaeal putative transposase ISC1217 Na_Ca_ex PF01699.24 gi|452208844|ref|YP_007488958.1| - 3.2e-58 196.0 41.2 4.2e-30 104.7 15.2 2.0 2 0 0 2 2 2 2 Sodium/calcium exchanger protein CTP_transf_1 PF01148.20 gi|452208846|ref|YP_007488960.1| - 0.00044 20.1 9.1 0.00085 19.2 9.1 1.6 1 1 0 1 1 1 1 Cytidylyltransferase family tRNA-synt_2c PF01411.19 gi|452208847|ref|YP_007488961.1| - 6.4e-15 54.7 0.0 1.1e-14 54.0 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class II (A) tRNA_SAD PF07973.14 gi|452208847|ref|YP_007488961.1| - 7.8e-12 45.1 0.4 1.4e-11 44.3 0.4 1.4 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain Nudix_N PF12535.8 gi|452208847|ref|YP_007488961.1| - 0.017 14.7 0.3 0.047 13.3 0.0 1.8 2 0 0 2 2 2 0 Hydrolase of X-linked nucleoside diphosphate N terminal NosD PF05048.13 gi|452208848|ref|YP_007488962.1| - 6.5e-26 91.1 6.9 2e-25 89.4 6.9 1.8 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Peptidase_S8 PF00082.22 gi|452208848|ref|YP_007488962.1| - 4e-18 65.7 0.1 8.7e-17 61.3 0.0 2.6 1 1 1 2 2 2 1 Subtilase family Beta_helix PF13229.6 gi|452208848|ref|YP_007488962.1| - 2.4e-09 37.3 8.1 2.4e-09 37.3 8.1 2.8 3 0 0 3 3 3 1 Right handed beta helix region DUF4407 PF14362.6 gi|452208849|ref|YP_007488963.1| - 0.0027 17.1 15.5 0.019 14.3 4.0 2.6 2 1 0 2 2 2 2 Domain of unknown function (DUF4407) GAS PF13851.6 gi|452208849|ref|YP_007488963.1| - 0.0055 16.1 4.8 0.0055 16.1 4.8 3.9 3 1 0 3 3 3 1 Growth-arrest specific micro-tubule binding DUF948 PF06103.11 gi|452208849|ref|YP_007488963.1| - 0.046 14.0 1.6 0.69 10.2 0.1 3.2 4 1 0 4 4 4 0 Bacterial protein of unknown function (DUF948) DUF2460 PF09343.10 gi|452208849|ref|YP_007488963.1| - 0.075 12.5 0.0 0.14 11.7 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical protein 2217 (DUF2460) COMP PF11598.8 gi|452208849|ref|YP_007488963.1| - 0.079 13.4 0.6 0.64 10.5 0.1 2.8 3 0 0 3 3 3 0 Cartilage oligomeric matrix protein DUF2730 PF10805.8 gi|452208849|ref|YP_007488963.1| - 0.12 12.5 7.6 0.43 10.7 0.0 4.3 3 1 2 5 5 5 0 Protein of unknown function (DUF2730) DUF1664 PF07889.12 gi|452208849|ref|YP_007488963.1| - 0.86 9.7 8.1 0.63 10.1 0.1 3.6 3 2 1 4 4 4 0 Protein of unknown function (DUF1664) Spc7 PF08317.11 gi|452208849|ref|YP_007488963.1| - 4.3 6.1 34.8 1.2 7.9 10.4 3.1 2 1 1 3 3 3 0 Spc7 kinetochore protein Laminin_II PF06009.12 gi|452208849|ref|YP_007488963.1| - 4.5 7.3 15.5 8.1 6.5 2.0 4.1 3 1 1 4 4 4 0 Laminin Domain II MS_channel PF00924.18 gi|452208850|ref|YP_007488964.1| - 2.3e-49 167.8 0.5 3.8e-49 167.0 0.5 1.3 1 0 0 1 1 1 1 Mechanosensitive ion channel DUF498 PF04430.14 gi|452208851|ref|YP_007488965.1| - 1.2e-11 44.7 0.0 1.3e-11 44.5 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF498/DUF598) AIM24 PF01987.17 gi|452208852|ref|YP_007488966.1| - 1.8e-25 90.0 0.0 2e-25 89.8 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 DUF166 PF02593.14 gi|452208853|ref|YP_007488967.1| - 1.4e-71 240.5 0.0 1.6e-71 240.3 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function Fer4 PF00037.27 gi|452208854|ref|YP_007488968.1| - 1.1e-14 53.5 16.6 1.3e-07 31.1 4.7 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|452208854|ref|YP_007488968.1| - 4e-10 39.3 14.3 2.6e-05 24.1 2.6 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|452208854|ref|YP_007488968.1| - 9e-10 38.1 14.0 2.1e-05 24.3 3.3 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|452208854|ref|YP_007488968.1| - 3e-09 36.9 9.3 0.00018 21.6 0.6 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452208854|ref|YP_007488968.1| - 1.7e-08 34.5 24.9 3.5e-06 27.1 15.6 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452208854|ref|YP_007488968.1| - 2.2e-08 34.9 9.1 0.00033 21.5 0.7 2.4 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.6 gi|452208854|ref|YP_007488968.1| - 2.4e-08 34.3 3.5 0.0034 17.8 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|452208854|ref|YP_007488968.1| - 2.6e-08 34.3 14.7 7.4e-08 32.9 14.7 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|452208854|ref|YP_007488968.1| - 4.6e-08 33.5 5.5 0.0042 17.6 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|452208854|ref|YP_007488968.1| - 2.4e-07 30.8 16.1 7.3e-06 26.0 17.0 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|452208854|ref|YP_007488968.1| - 2.8e-06 27.4 13.3 0.0022 18.4 3.9 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|452208854|ref|YP_007488968.1| - 3.4e-06 27.5 13.7 0.0051 17.3 2.0 2.4 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_18 PF13746.6 gi|452208854|ref|YP_007488968.1| - 0.00015 22.0 12.1 0.0063 16.7 12.6 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain NIL PF09383.10 gi|452208854|ref|YP_007488968.1| - 0.00075 19.3 0.0 0.0012 18.7 0.0 1.2 1 0 0 1 1 1 1 NIL domain Fer4_3 PF12798.7 gi|452208854|ref|YP_007488968.1| - 0.038 14.9 24.6 0.31 12.1 6.3 2.9 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|452208854|ref|YP_007488968.1| - 0.061 14.2 14.0 0.49 11.3 2.3 2.2 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|452208854|ref|YP_007488968.1| - 0.56 11.0 12.9 2.2 9.1 2.5 2.6 3 0 0 3 3 2 0 4Fe-4S single cluster domain HcyBio PF01837.16 gi|452208855|ref|YP_007488969.1| - 3.4e-143 476.7 0.2 4.5e-143 476.3 0.2 1.1 1 0 0 1 1 1 1 Homocysteine biosynthesis enzyme, sulfur-incorporation CBS PF00571.28 gi|452208855|ref|YP_007488969.1| - 9.7e-24 83.6 2.0 1.7e-10 41.2 0.0 3.2 3 0 0 3 3 3 2 CBS domain CTP_transf_like PF01467.26 gi|452208856|ref|YP_007488970.1| - 1.5e-19 70.6 0.0 1.7e-19 70.4 0.0 1.0 1 0 0 1 1 1 1 Cytidylyltransferase-like FAD_syn PF06574.12 gi|452208856|ref|YP_007488970.1| - 0.035 14.0 0.1 0.068 13.1 0.1 1.6 1 1 0 1 1 1 0 FAD synthetase Urm1 PF09138.11 gi|452208856|ref|YP_007488970.1| - 0.048 14.0 0.0 0.067 13.5 0.0 1.2 1 0 0 1 1 1 0 Urm1 (Ubiquitin related modifier) HIGH_NTase1 PF05636.11 gi|452208856|ref|YP_007488970.1| - 0.099 11.8 0.0 2.8 7.1 0.0 2.0 1 1 1 2 2 2 0 HIGH Nucleotidyl Transferase DUF3219 PF11514.8 gi|452208856|ref|YP_007488970.1| - 0.15 12.1 0.0 0.23 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3219) Aminotran_1_2 PF00155.21 gi|452208857|ref|YP_007488971.1| - 3.8e-66 223.7 0.0 4.3e-66 223.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 gi|452208857|ref|YP_007488971.1| - 0.0094 14.5 0.0 0.015 13.9 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Rsbr_N PF08678.10 gi|452208857|ref|YP_007488971.1| - 0.032 14.3 0.0 0.37 10.9 0.0 2.4 2 1 0 2 2 2 0 Rsbr N terminal Aminotran_5 PF00266.19 gi|452208857|ref|YP_007488971.1| - 0.041 12.8 0.0 0.067 12.1 0.0 1.4 1 0 0 1 1 1 0 Aminotransferase class-V DMRL_synthase PF00885.19 gi|452208858|ref|YP_007488972.1| - 1.3e-29 102.9 0.1 1.4e-29 102.7 0.1 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase DMRL_synthase PF00885.19 gi|452208859|ref|YP_007488973.1| - 7.3e-16 58.3 0.1 8.7e-16 58.0 0.1 1.1 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase Aminotran_5 PF00266.19 gi|452208860|ref|YP_007488974.1| - 1e-43 149.8 0.0 1.2e-43 149.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 gi|452208860|ref|YP_007488974.1| - 0.00085 18.7 0.1 0.0045 16.4 0.0 1.9 2 0 0 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 gi|452208860|ref|YP_007488974.1| - 0.085 12.1 0.0 0.13 11.5 0.0 1.4 1 0 0 1 1 1 0 Beta-eliminating lyase CBS PF00571.28 gi|452208861|ref|YP_007488975.1| - 1.1e-17 64.2 7.6 1.7e-09 38.0 0.8 2.7 3 0 0 3 3 3 2 CBS domain HTH_3 PF01381.22 gi|452208861|ref|YP_007488975.1| - 2.1e-15 56.5 0.4 1.6e-14 53.6 0.1 2.2 2 0 0 2 2 2 1 Helix-turn-helix HTH_31 PF13560.6 gi|452208861|ref|YP_007488975.1| - 1.9e-12 47.3 0.1 4.6e-12 46.1 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|452208861|ref|YP_007488975.1| - 3e-07 30.4 0.1 7.2e-07 29.1 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|452208861|ref|YP_007488975.1| - 0.00012 21.9 0.1 0.00022 21.0 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|452208861|ref|YP_007488975.1| - 0.00038 20.8 0.0 0.0012 19.3 0.0 1.8 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_37 PF13744.6 gi|452208861|ref|YP_007488975.1| - 0.00042 20.2 0.1 0.0018 18.2 0.1 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain Pou PF00157.17 gi|452208861|ref|YP_007488975.1| - 0.0057 16.6 0.0 0.018 15.0 0.0 1.9 1 1 0 1 1 1 1 Pou domain - N-terminal to homeobox domain MqsA_antitoxin PF15731.5 gi|452208861|ref|YP_007488975.1| - 0.026 14.6 0.0 0.046 13.8 0.0 1.3 1 0 0 1 1 1 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA HTH_24 PF13412.6 gi|452208861|ref|YP_007488975.1| - 0.051 13.1 0.8 0.41 10.3 0.0 2.6 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding LacI PF00356.21 gi|452208861|ref|YP_007488975.1| - 0.065 13.0 2.6 4.6 7.1 0.1 2.9 2 1 0 2 2 2 0 Bacterial regulatory proteins, lacI family MarR_2 PF12802.7 gi|452208861|ref|YP_007488975.1| - 0.1 12.5 0.0 0.51 10.3 0.0 2.1 2 0 0 2 2 2 0 MarR family HTH_23 PF13384.6 gi|452208861|ref|YP_007488975.1| - 0.14 12.0 0.0 8.9 6.3 0.0 2.5 2 0 0 2 2 2 0 Homeodomain-like domain MarR PF01047.22 gi|452208861|ref|YP_007488975.1| - 0.16 11.9 0.2 1.1 9.3 0.0 2.3 3 0 0 3 3 3 0 MarR family TetR_N PF00440.23 gi|452208861|ref|YP_007488975.1| - 0.21 11.4 0.0 0.46 10.3 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family AAA PF00004.29 gi|452208862|ref|YP_007488976.1| - 2.8e-97 322.2 0.0 7.2e-48 162.4 0.0 2.4 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|452208862|ref|YP_007488976.1| - 3.6e-31 106.7 0.3 2.2e-15 56.1 0.1 2.7 2 0 0 2 2 2 2 AAA+ lid domain CDC48_N PF02359.18 gi|452208862|ref|YP_007488976.1| - 9e-27 93.1 0.0 5e-26 90.7 0.1 2.3 2 0 0 2 2 1 1 Cell division protein 48 (CDC48), N-terminal domain AAA_16 PF13191.6 gi|452208862|ref|YP_007488976.1| - 5.5e-17 62.7 0.0 3e-08 34.2 0.0 3.0 2 1 0 2 2 2 2 AAA ATPase domain CDC48_2 PF02933.17 gi|452208862|ref|YP_007488976.1| - 8e-15 54.4 0.8 5.9e-14 51.6 0.3 2.5 2 0 0 2 2 2 1 Cell division protein 48 (CDC48), domain 2 RuvB_N PF05496.12 gi|452208862|ref|YP_007488976.1| - 2.3e-14 53.5 0.0 4e-06 26.7 0.0 2.7 3 0 0 3 3 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 gi|452208862|ref|YP_007488976.1| - 6e-14 52.5 0.0 7.6e-08 32.7 0.0 2.5 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_5 PF07728.14 gi|452208862|ref|YP_007488976.1| - 5.2e-12 45.9 0.8 8.5e-05 22.6 0.0 3.8 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 gi|452208862|ref|YP_007488976.1| - 1.7e-11 44.5 0.3 0.00088 19.6 0.0 4.3 2 2 1 4 4 4 2 AAA domain AAA_14 PF13173.6 gi|452208862|ref|YP_007488976.1| - 2.6e-11 43.7 0.0 3.1e-06 27.2 0.0 2.5 2 0 0 2 2 2 2 AAA domain TIP49 PF06068.13 gi|452208862|ref|YP_007488976.1| - 3.5e-10 39.6 0.0 0.00044 19.6 0.0 2.4 2 0 0 2 2 2 2 TIP49 P-loop domain AAA_33 PF13671.6 gi|452208862|ref|YP_007488976.1| - 1.7e-09 38.0 0.0 0.00013 22.1 0.0 2.5 2 0 0 2 2 2 2 AAA domain IstB_IS21 PF01695.17 gi|452208862|ref|YP_007488976.1| - 7.3e-09 35.6 0.0 0.0033 17.2 0.0 2.9 3 0 0 3 3 3 2 IstB-like ATP binding protein Sigma54_activat PF00158.26 gi|452208862|ref|YP_007488976.1| - 3.8e-08 33.2 0.0 0.0076 16.0 0.0 3.3 3 1 0 3 3 3 2 Sigma-54 interaction domain NACHT PF05729.12 gi|452208862|ref|YP_007488976.1| - 8.2e-08 32.3 0.2 0.12 12.3 0.0 3.9 3 1 1 4 4 4 2 NACHT domain Mg_chelatase PF01078.21 gi|452208862|ref|YP_007488976.1| - 1.3e-07 31.2 0.5 0.015 14.7 0.1 2.6 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI ABC_tran PF00005.27 gi|452208862|ref|YP_007488976.1| - 2.5e-07 31.3 0.0 0.009 16.5 0.0 2.5 2 0 0 2 2 2 2 ABC transporter AAA_18 PF13238.6 gi|452208862|ref|YP_007488976.1| - 3.3e-07 30.9 0.0 0.043 14.4 0.0 2.7 2 0 0 2 2 2 2 AAA domain RNA_helicase PF00910.22 gi|452208862|ref|YP_007488976.1| - 6.4e-07 29.7 0.0 0.052 13.9 0.0 2.6 2 0 0 2 2 2 2 RNA helicase AAA_24 PF13479.6 gi|452208862|ref|YP_007488976.1| - 8.9e-07 28.8 0.0 0.024 14.4 0.0 2.7 2 0 0 2 2 2 2 AAA domain AAA_7 PF12775.7 gi|452208862|ref|YP_007488976.1| - 1.4e-06 27.9 0.0 0.076 12.5 0.0 2.7 2 0 0 2 2 2 2 P-loop containing dynein motor region Parvo_NS1 PF01057.17 gi|452208862|ref|YP_007488976.1| - 3e-06 26.5 0.0 0.021 13.9 0.0 2.2 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 AAA_28 PF13521.6 gi|452208862|ref|YP_007488976.1| - 3.7e-06 27.3 0.0 0.063 13.5 0.0 2.5 2 0 0 2 2 2 2 AAA domain Zeta_toxin PF06414.12 gi|452208862|ref|YP_007488976.1| - 1e-05 25.0 0.0 0.14 11.4 0.0 2.4 2 0 0 2 2 2 2 Zeta toxin Vps4_C PF09336.10 gi|452208862|ref|YP_007488976.1| - 1.6e-05 24.8 0.0 0.21 11.6 0.0 2.9 2 0 0 2 2 2 2 Vps4 C terminal oligomerisation domain TsaE PF02367.17 gi|452208862|ref|YP_007488976.1| - 1.8e-05 24.8 0.0 0.24 11.4 0.0 2.5 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE ATPase PF06745.13 gi|452208862|ref|YP_007488976.1| - 2.7e-05 23.6 0.2 0.69 9.2 0.0 3.3 2 1 0 3 3 3 2 KaiC PhoH PF02562.16 gi|452208862|ref|YP_007488976.1| - 3.2e-05 23.5 0.9 0.45 9.9 0.0 3.7 4 0 0 4 4 3 2 PhoH-like protein NB-ARC PF00931.22 gi|452208862|ref|YP_007488976.1| - 3.8e-05 23.0 0.0 0.18 11.0 0.0 2.6 2 0 0 2 2 2 2 NB-ARC domain AAA_3 PF07726.11 gi|452208862|ref|YP_007488976.1| - 7.6e-05 22.6 0.0 0.45 10.4 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_11 PF13086.6 gi|452208862|ref|YP_007488976.1| - 7.7e-05 22.6 0.0 0.25 11.1 0.0 2.3 2 0 0 2 2 2 2 AAA domain AAA_25 PF13481.6 gi|452208862|ref|YP_007488976.1| - 0.00013 21.7 5.7 0.42 10.2 0.2 3.8 2 2 1 3 3 3 2 AAA domain DUF2075 PF09848.9 gi|452208862|ref|YP_007488976.1| - 0.00016 21.1 0.0 0.42 9.8 0.0 2.2 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) Sigma54_activ_2 PF14532.6 gi|452208862|ref|YP_007488976.1| - 0.00022 21.4 0.0 0.57 10.3 0.0 2.4 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_30 PF13604.6 gi|452208862|ref|YP_007488976.1| - 0.00029 20.6 0.0 0.58 9.8 0.0 2.5 2 0 0 2 2 2 2 AAA domain ATPase_2 PF01637.18 gi|452208862|ref|YP_007488976.1| - 0.00044 20.2 0.0 2.7 7.8 0.0 3.2 2 1 0 2 2 2 2 ATPase domain predominantly from Archaea AAA_17 PF13207.6 gi|452208862|ref|YP_007488976.1| - 0.00072 20.0 0.0 1.2 9.6 0.0 3.2 3 0 0 3 3 3 1 AAA domain Guanylate_kin PF00625.21 gi|452208862|ref|YP_007488976.1| - 0.00074 19.3 0.2 14 5.3 0.0 4.2 2 2 2 4 4 4 0 Guanylate kinase AAA_19 PF13245.6 gi|452208862|ref|YP_007488976.1| - 0.00083 19.7 0.0 1.7 9.0 0.0 2.6 2 0 0 2 2 2 1 AAA domain DUF815 PF05673.13 gi|452208862|ref|YP_007488976.1| - 0.0014 17.9 0.0 1.6 7.8 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF815) Bac_DnaA PF00308.18 gi|452208862|ref|YP_007488976.1| - 0.003 17.4 0.1 2.7 7.8 0.0 2.9 2 1 0 2 2 2 1 Bacterial dnaA protein ResIII PF04851.15 gi|452208862|ref|YP_007488976.1| - 0.0037 17.3 0.0 1.6 8.7 0.0 2.3 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit TniB PF05621.11 gi|452208862|ref|YP_007488976.1| - 0.0044 16.4 0.0 1.9 7.9 0.0 3.3 4 0 0 4 4 4 1 Bacterial TniB protein AFG1_ATPase PF03969.16 gi|452208862|ref|YP_007488976.1| - 0.013 14.4 0.0 2 7.2 0.0 2.3 2 0 0 2 2 2 0 AFG1-like ATPase CPT PF07931.12 gi|452208862|ref|YP_007488976.1| - 0.021 14.7 0.0 4.3 7.2 0.0 2.4 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein NTPase_1 PF03266.15 gi|452208862|ref|YP_007488976.1| - 0.021 14.7 0.1 9.5 6.1 0.0 3.1 2 1 0 3 3 3 0 NTPase Cytidylate_kin PF02224.18 gi|452208862|ref|YP_007488976.1| - 0.033 13.9 0.1 7.4 6.2 0.0 2.4 2 0 0 2 2 2 0 Cytidylate kinase Viral_helicase1 PF01443.18 gi|452208862|ref|YP_007488976.1| - 0.044 13.5 0.0 3.7 7.2 0.0 2.3 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase SKI PF01202.22 gi|452208862|ref|YP_007488976.1| - 0.052 13.7 0.1 14 5.8 0.0 2.9 3 0 0 3 3 3 0 Shikimate kinase Hydin_ADK PF17213.3 gi|452208862|ref|YP_007488976.1| - 0.07 13.4 0.3 2.7 8.2 0.0 2.3 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain AAA_29 PF13555.6 gi|452208862|ref|YP_007488976.1| - 0.077 12.7 0.0 16 5.3 0.0 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain KAP_NTPase PF07693.14 gi|452208862|ref|YP_007488976.1| - 0.078 12.2 0.2 11 5.1 0.0 3.0 2 2 1 3 3 3 0 KAP family P-loop domain PduV-EutP PF10662.9 gi|452208862|ref|YP_007488976.1| - 0.081 12.7 0.0 12 5.6 0.0 2.4 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation Torsin PF06309.11 gi|452208862|ref|YP_007488976.1| - 0.091 12.9 0.0 8.4 6.5 0.0 2.4 2 0 0 2 2 2 0 Torsin T2SSE PF00437.20 gi|452208862|ref|YP_007488976.1| - 0.099 11.7 0.0 14 4.6 0.0 2.5 2 0 0 2 2 2 0 Type II/IV secretion system protein cobW PF02492.19 gi|452208862|ref|YP_007488976.1| - 0.17 11.4 0.1 15 5.1 0.0 2.5 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain FMN_red PF03358.15 gi|452208863|ref|YP_007488977.1| - 1e-17 64.3 0.0 1.4e-17 63.9 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|452208863|ref|YP_007488977.1| - 0.00012 21.9 0.0 0.00034 20.4 0.0 1.7 1 1 0 1 1 1 1 Flavodoxin-like fold HTH_45 PF14947.6 gi|452208865|ref|YP_007488979.1| - 1.8e-22 79.1 0.9 1.9e-22 79.0 0.9 1.0 1 0 0 1 1 1 1 Winged helix-turn-helix Rrf2 PF02082.20 gi|452208865|ref|YP_007488979.1| - 0.01 16.2 0.1 0.016 15.5 0.1 1.3 1 0 0 1 1 1 0 Transcriptional regulator AAA PF00004.29 gi|452208866|ref|YP_007488980.1| - 9.9e-11 42.2 0.0 2.6e-10 40.9 0.0 1.7 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|452208866|ref|YP_007488980.1| - 3.3e-05 23.7 0.0 6.2e-05 22.8 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain Rad17 PF03215.15 gi|452208866|ref|YP_007488980.1| - 9.8e-05 22.4 0.0 0.0002 21.4 0.0 1.5 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_assoc_2 PF16193.5 gi|452208866|ref|YP_007488980.1| - 0.00013 22.2 0.2 0.00033 20.9 0.2 1.7 1 0 0 1 1 1 1 AAA C-terminal domain AAA_16 PF13191.6 gi|452208866|ref|YP_007488980.1| - 0.0002 21.8 0.0 0.00062 20.2 0.0 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|452208866|ref|YP_007488980.1| - 0.00022 21.5 1.1 0.51 10.6 0.0 3.4 2 2 1 3 3 3 2 AAA domain AAA_14 PF13173.6 gi|452208866|ref|YP_007488980.1| - 0.0054 16.8 0.0 0.013 15.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain DNA_pol3_delta2 PF13177.6 gi|452208866|ref|YP_007488980.1| - 0.0064 16.3 0.0 2.2 8.0 0.0 2.8 2 1 1 3 3 3 1 DNA polymerase III, delta subunit AAA_6 PF12774.7 gi|452208866|ref|YP_007488980.1| - 0.014 14.3 0.0 0.1 11.6 0.0 2.0 2 0 0 2 2 2 0 Hydrolytic ATP binding site of dynein motor region IPT PF01745.16 gi|452208866|ref|YP_007488980.1| - 0.015 14.7 0.0 0.048 13.1 0.0 1.8 2 0 0 2 2 2 0 Isopentenyl transferase IstB_IS21 PF01695.17 gi|452208866|ref|YP_007488980.1| - 0.03 14.1 0.0 0.055 13.2 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_24 PF13479.6 gi|452208866|ref|YP_007488980.1| - 0.043 13.6 0.0 0.098 12.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|452208866|ref|YP_007488980.1| - 0.074 12.8 0.2 0.15 11.8 0.2 1.4 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 gi|452208866|ref|YP_007488980.1| - 0.078 12.5 0.1 0.29 10.7 0.1 1.8 1 1 1 2 2 2 0 AAA domain DUF815 PF05673.13 gi|452208866|ref|YP_007488980.1| - 0.082 12.1 0.0 0.13 11.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_7 PF12775.7 gi|452208866|ref|YP_007488980.1| - 0.11 12.0 0.0 0.2 11.2 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region RsgA_GTPase PF03193.16 gi|452208866|ref|YP_007488980.1| - 0.13 12.2 0.0 0.26 11.2 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase RNA_helicase PF00910.22 gi|452208866|ref|YP_007488980.1| - 0.13 12.6 0.0 0.33 11.4 0.0 1.7 1 0 0 1 1 1 0 RNA helicase NACHT PF05729.12 gi|452208866|ref|YP_007488980.1| - 0.15 12.0 0.0 0.67 9.9 0.0 2.0 2 0 0 2 2 2 0 NACHT domain DUF3357 PF11837.8 gi|452208866|ref|YP_007488980.1| - 0.19 12.2 0.4 0.61 10.6 0.4 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF3357) PTA_PTB PF01515.19 gi|452208867|ref|YP_007488981.1| - 7.1e-05 22.3 0.0 0.11 11.7 0.0 2.2 1 1 1 2 2 2 2 Phosphate acetyl/butaryl transferase MtrA PF04208.14 gi|452208868|ref|YP_007488982.1| - 3.2e-46 157.1 0.1 4e-46 156.8 0.1 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit A MtrH PF02007.18 gi|452208869|ref|YP_007488983.1| - 2.7e-120 401.0 0.2 3.1e-120 400.8 0.2 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase MtrH subunit Prok-RING_2 PF14445.6 gi|452208872|ref|YP_007488986.1| - 0.0028 17.8 8.9 0.008 16.3 8.9 1.7 1 1 0 1 1 1 1 Prokaryotic RING finger family 2 zf-HIT PF04438.16 gi|452208872|ref|YP_007488986.1| - 0.019 14.8 6.2 0.019 14.8 6.2 2.1 1 1 1 2 2 2 0 HIT zinc finger Gin PF10764.9 gi|452208872|ref|YP_007488986.1| - 0.071 13.1 2.4 0.071 13.1 2.4 1.8 1 1 1 2 2 2 0 Inhibitor of sigma-G Gin FYVE PF01363.21 gi|452208872|ref|YP_007488986.1| - 0.079 13.1 14.0 0.18 11.9 14.0 1.8 1 1 0 1 1 1 0 FYVE zinc finger C5HCH PF17982.1 gi|452208872|ref|YP_007488986.1| - 0.22 11.7 10.3 0.33 11.1 10.3 1.4 1 1 0 1 1 1 0 NSD Cys-His rich domain zf-B_box PF00643.24 gi|452208872|ref|YP_007488986.1| - 0.29 11.3 11.9 0.98 9.6 11.9 1.9 1 1 0 1 1 1 0 B-box zinc finger zf-UDP PF14569.6 gi|452208872|ref|YP_007488986.1| - 2.6 8.2 9.9 9.7 6.4 9.9 1.9 1 1 0 1 1 1 0 Zinc-binding RING-finger zf_C2H2_13 PF18508.1 gi|452208872|ref|YP_007488986.1| - 2.8 7.6 13.6 4.4 7.0 0.7 2.3 1 1 1 2 2 2 0 Zinc finger domain ILVD_EDD PF00920.21 gi|452208873|ref|YP_007488987.1| - 2.6e-222 739.0 0.4 3e-222 738.8 0.4 1.0 1 0 0 1 1 1 1 Dehydratase family PAS_3 PF08447.12 gi|452208874|ref|YP_007488988.1| - 8.8e-54 179.8 2.5 7.5e-19 67.8 0.0 3.3 3 0 0 3 3 3 3 PAS fold PAS PF00989.25 gi|452208874|ref|YP_007488988.1| - 2.5e-12 46.8 0.3 0.00036 20.5 0.0 3.4 3 0 0 3 3 3 3 PAS fold PAS_4 PF08448.10 gi|452208874|ref|YP_007488988.1| - 8.9e-09 35.6 0.0 0.06 13.6 0.0 4.0 4 0 0 4 4 4 2 PAS fold PAS_9 PF13426.7 gi|452208874|ref|YP_007488988.1| - 3.4e-08 33.7 3.6 0.031 14.5 0.3 3.5 3 0 0 3 3 3 3 PAS domain GAF_2 PF13185.6 gi|452208874|ref|YP_007488988.1| - 3.8e-06 27.2 0.0 1e-05 25.9 0.0 1.7 1 0 0 1 1 1 1 GAF domain GAF_3 PF13492.6 gi|452208874|ref|YP_007488988.1| - 7e-05 23.2 0.0 0.00014 22.2 0.0 1.5 1 0 0 1 1 1 1 GAF domain PAS_11 PF14598.6 gi|452208874|ref|YP_007488988.1| - 0.0015 18.7 0.0 1.6 8.9 0.0 3.2 3 0 0 3 3 3 1 PAS domain GAF PF01590.26 gi|452208874|ref|YP_007488988.1| - 0.0064 17.1 0.0 0.012 16.2 0.0 1.6 1 0 0 1 1 1 1 GAF domain LicD PF04991.13 gi|452208874|ref|YP_007488988.1| - 0.0068 16.6 0.8 3.9 7.5 0.0 3.2 3 0 0 3 3 3 1 LicD family VanY PF02557.17 gi|452208874|ref|YP_007488988.1| - 0.0075 16.1 0.0 0.88 9.4 0.0 3.0 3 0 0 3 3 3 1 D-alanyl-D-alanine carboxypeptidase Thr_dehydrat_C PF00585.18 gi|452208874|ref|YP_007488988.1| - 0.066 13.0 1.0 5.2 6.9 0.0 3.8 3 1 1 4 4 4 0 C-terminal regulatory domain of Threonine dehydratase R2K_2 PF18299.1 gi|452208874|ref|YP_007488988.1| - 0.073 12.9 0.4 56 3.6 0.0 3.4 3 0 0 3 3 3 0 ATP-grasp domain, R2K clade family 2 POT1 PF02765.17 gi|452208874|ref|YP_007488988.1| - 0.1 12.4 0.0 11 5.8 0.0 3.0 3 0 0 3 3 3 0 Telomeric single stranded DNA binding POT1/CDC13 Holin_SPP1 PF04688.13 gi|452208874|ref|YP_007488988.1| - 0.14 12.3 0.2 41 4.4 0.0 3.3 3 0 0 3 3 3 0 SPP1 phage holin Tudor_2 PF18104.1 gi|452208874|ref|YP_007488988.1| - 0.16 11.7 0.4 12 5.6 0.0 2.7 2 0 0 2 2 2 0 Jumonji domain-containing protein 2A Tudor domain FAM165 PF14981.6 gi|452208874|ref|YP_007488988.1| - 0.29 11.0 1.1 23 4.9 0.1 2.6 2 0 0 2 2 2 0 FAM165 family Myb_CC_LHEQLE PF14379.6 gi|452208874|ref|YP_007488988.1| - 0.65 9.8 4.9 4.4 7.1 0.2 3.5 3 0 0 3 3 3 0 MYB-CC type transfactor, LHEQLE motif Flavodoxin_1 PF00258.25 gi|452208875|ref|YP_007488989.1| - 4.8e-14 52.8 0.0 8.9e-14 51.9 0.0 1.4 1 1 0 1 1 1 1 Flavodoxin Flavodoxin_5 PF12724.7 gi|452208875|ref|YP_007488989.1| - 1.6e-08 34.9 0.0 2.5e-08 34.3 0.0 1.4 1 1 0 1 1 1 1 Flavodoxin domain Flavodoxin_3 PF12641.7 gi|452208875|ref|YP_007488989.1| - 6.3e-05 22.7 0.0 8.5e-05 22.3 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin domain DUF1724 PF08350.10 gi|452208877|ref|YP_007488991.1| - 3e-17 62.5 0.1 6.3e-17 61.5 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|452208877|ref|YP_007488991.1| - 0.0051 16.7 0.2 0.01 15.7 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 gi|452208877|ref|YP_007488991.1| - 0.015 15.2 0.5 0.039 13.9 0.5 1.7 1 0 0 1 1 1 0 HTH domain TrmB PF01978.19 gi|452208877|ref|YP_007488991.1| - 0.082 12.8 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB DUF1699 PF08004.11 gi|452208878|ref|YP_007488992.1| - 1.2e-62 209.3 1.1 1.4e-62 209.2 1.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) Img2 PF05046.14 gi|452208878|ref|YP_007488992.1| - 0.044 14.1 0.0 0.071 13.4 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) PAM2 PF07145.15 gi|452208878|ref|YP_007488992.1| - 0.058 13.1 0.1 8 6.4 0.0 2.4 2 0 0 2 2 2 0 Ataxin-2 C-terminal region DUF4394 PF14339.6 gi|452208878|ref|YP_007488992.1| - 0.23 10.8 0.0 0.27 10.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4394) PKD PF00801.20 gi|452208882|ref|YP_007488996.1| - 3.7e-84 276.6 65.7 3.9e-15 55.4 1.2 7.4 7 0 0 7 7 7 7 PKD domain MG2 PF01835.19 gi|452208882|ref|YP_007488996.1| - 1.6e-12 47.7 17.0 0.73 10.3 0.1 7.2 4 2 3 7 7 7 7 MG2 domain PKD_3 PF16820.5 gi|452208882|ref|YP_007488996.1| - 1.8e-10 40.4 24.8 0.25 11.1 0.2 7.5 7 0 0 7 7 7 7 PKD-like domain DUF1724 PF08350.10 gi|452208885|ref|YP_007488999.1| - 8e-18 64.3 0.2 1.4e-17 63.5 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) DUF3458_C PF17432.2 gi|452208888|ref|YP_007489002.1| - 1.9e-33 116.2 1.0 2.6e-33 115.7 1.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3458_C) ARM repeats Peptidase_M1_N PF17900.1 gi|452208888|ref|YP_007489002.1| - 6.4e-10 39.5 0.0 1.2e-09 38.6 0.0 1.4 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain DUF3458 PF11940.8 gi|452208888|ref|YP_007489002.1| - 0.0022 18.4 0.0 0.0054 17.1 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF3458) Ig-like fold DUF1622 PF07784.11 gi|452208889|ref|YP_007489003.1| - 6e-20 70.9 0.1 9.7e-20 70.3 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1622) Sdh_cyt PF01127.22 gi|452208889|ref|YP_007489003.1| - 0.093 12.8 0.3 0.14 12.2 0.3 1.4 1 0 0 1 1 1 0 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DUF1622 PF07784.11 gi|452208890|ref|YP_007489004.1| - 9.6e-20 70.3 0.5 1.4e-19 69.8 0.5 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1622) AgrB PF04647.15 gi|452208890|ref|YP_007489004.1| - 0.031 13.6 0.9 0.04 13.2 0.9 1.1 1 0 0 1 1 1 0 Accessory gene regulator B Bromodomain PF00439.25 gi|452208890|ref|YP_007489004.1| - 0.13 12.3 0.1 0.24 11.5 0.1 1.3 1 0 0 1 1 1 0 Bromodomain PALP PF00291.25 gi|452208891|ref|YP_007489005.1| - 2.5e-80 270.1 3.2 2.9e-80 269.9 3.2 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme C1_2 PF03107.16 gi|452208891|ref|YP_007489005.1| - 0.15 12.4 2.0 0.35 11.2 2.0 1.6 1 0 0 1 1 1 0 C1 domain zinc-ribbons_6 PF07191.12 gi|452208891|ref|YP_007489005.1| - 0.15 12.1 0.5 0.29 11.1 0.5 1.5 1 0 0 1 1 1 0 zinc-ribbons zinc_ribbon_2 PF13240.6 gi|452208891|ref|YP_007489005.1| - 0.25 11.1 2.6 0.51 10.1 2.6 1.5 1 0 0 1 1 1 0 zinc-ribbon domain A2L_zn_ribbon PF08792.10 gi|452208891|ref|YP_007489005.1| - 0.3 10.9 1.6 21 5.0 0.1 2.5 2 0 0 2 2 2 0 A2L zinc ribbon domain tRNA-synt_1 PF00133.22 gi|452208892|ref|YP_007489006.1| - 3.2e-56 190.8 0.1 1.4e-40 139.2 0.1 2.8 2 1 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 gi|452208892|ref|YP_007489006.1| - 2.5e-25 89.1 0.6 1e-11 44.2 0.0 3.2 3 0 0 3 3 3 3 tRNA synthetases class I (M) Anticodon_1 PF08264.13 gi|452208892|ref|YP_007489006.1| - 1.2e-21 77.3 0.2 2.2e-21 76.4 0.2 1.4 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.19 gi|452208892|ref|YP_007489006.1| - 5.6e-10 39.0 0.1 3e-06 26.8 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.6 gi|452208892|ref|YP_007489006.1| - 7.9e-07 28.8 0.0 1.5e-06 27.9 0.0 1.3 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1d PF00750.19 gi|452208892|ref|YP_007489006.1| - 0.0052 15.8 0.0 0.0093 15.0 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (R) tRNA-synt_1f PF01921.18 gi|452208892|ref|YP_007489006.1| - 0.0073 15.3 0.0 0.016 14.2 0.0 1.5 1 0 0 1 1 1 1 tRNA synthetases class I (K) CN_hydrolase PF00795.22 gi|452208893|ref|YP_007489007.1| - 7e-49 166.5 0.0 5.8e-48 163.5 0.0 1.9 1 1 0 1 1 1 1 Carbon-nitrogen hydrolase PvlArgDC PF01862.16 gi|452208896|ref|YP_007489010.1| - 1.4e-55 187.6 0.0 1.5e-55 187.4 0.0 1.0 1 0 0 1 1 1 1 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) DS PF01916.17 gi|452208897|ref|YP_007489011.1| - 2.7e-99 332.1 0.0 3.1e-99 331.9 0.0 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase CdAMP_rec PF06153.11 gi|452208897|ref|YP_007489011.1| - 0.067 13.4 0.1 0.17 12.1 0.0 1.7 2 0 0 2 2 2 0 Cyclic-di-AMP receptor ArsR PF09824.9 gi|452208898|ref|YP_007489012.1| - 8.3e-51 171.7 0.1 9.3e-51 171.6 0.1 1.0 1 0 0 1 1 1 1 ArsR transcriptional regulator SMC_ScpB PF04079.16 gi|452208898|ref|YP_007489012.1| - 0.0056 16.3 0.0 0.19 11.3 0.0 2.1 2 0 0 2 2 2 1 Segregation and condensation complex subunit ScpB Retrotrans_gag PF03732.17 gi|452208898|ref|YP_007489012.1| - 0.11 12.8 0.0 0.16 12.2 0.0 1.2 1 0 0 1 1 1 0 Retrotransposon gag protein MarR_2 PF12802.7 gi|452208899|ref|YP_007489013.1| - 1e-10 41.4 0.1 4.2e-10 39.4 0.0 1.9 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.6 gi|452208899|ref|YP_007489013.1| - 1.4e-10 40.6 0.3 4.9e-10 38.8 0.0 2.2 3 0 0 3 3 2 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 gi|452208899|ref|YP_007489013.1| - 3.9e-08 33.1 0.3 4e-06 26.7 0.0 3.0 3 0 0 3 3 3 1 Crp-like helix-turn-helix domain MarR PF01047.22 gi|452208899|ref|YP_007489013.1| - 5.5e-07 29.4 0.2 2.9e-06 27.1 0.0 2.2 3 0 0 3 3 3 1 MarR family HTH_3 PF01381.22 gi|452208899|ref|YP_007489013.1| - 4.4e-05 23.5 0.1 0.0036 17.3 0.0 2.7 2 0 0 2 2 2 1 Helix-turn-helix Mnd1 PF03962.15 gi|452208899|ref|YP_007489013.1| - 4.9e-05 23.5 0.1 0.0011 19.3 0.0 2.7 3 0 0 3 3 3 1 Mnd1 HTH domain HTH_11 PF08279.12 gi|452208899|ref|YP_007489013.1| - 0.00011 22.1 0.1 0.00024 21.0 0.1 1.6 1 0 0 1 1 1 1 HTH domain HTH_45 PF14947.6 gi|452208899|ref|YP_007489013.1| - 0.00011 22.1 0.0 0.00021 21.2 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix Rrf2 PF02082.20 gi|452208899|ref|YP_007489013.1| - 0.00023 21.4 0.0 0.00059 20.1 0.0 1.7 1 0 0 1 1 1 1 Transcriptional regulator HTH_27 PF13463.6 gi|452208899|ref|YP_007489013.1| - 0.00053 20.4 0.0 0.0014 19.1 0.0 1.7 1 0 0 1 1 1 1 Winged helix DNA-binding domain Fe_dep_repress PF01325.19 gi|452208899|ref|YP_007489013.1| - 0.0011 19.2 0.1 0.0044 17.2 0.0 2.0 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain HTH_IclR PF09339.10 gi|452208899|ref|YP_007489013.1| - 0.0024 17.6 0.0 0.0056 16.5 0.0 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_28 PF13518.6 gi|452208899|ref|YP_007489013.1| - 0.0027 17.8 0.0 0.02 15.0 0.0 2.4 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_36 PF13730.6 gi|452208899|ref|YP_007489013.1| - 0.0065 16.4 0.0 0.017 15.1 0.0 1.7 2 0 0 2 2 1 1 Helix-turn-helix domain DUF4423 PF14394.6 gi|452208899|ref|YP_007489013.1| - 0.0087 15.8 0.0 0.017 14.9 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_23 PF13384.6 gi|452208899|ref|YP_007489013.1| - 0.0089 15.8 0.0 0.024 14.4 0.0 1.8 1 0 0 1 1 1 1 Homeodomain-like domain HxlR PF01638.17 gi|452208899|ref|YP_007489013.1| - 0.013 15.3 0.1 0.036 13.9 0.1 1.7 1 0 0 1 1 1 0 HxlR-like helix-turn-helix HTH_13 PF11972.8 gi|452208899|ref|YP_007489013.1| - 0.018 15.1 0.1 0.11 12.6 0.0 2.2 2 0 0 2 2 2 0 HTH DNA binding domain DUF4364 PF14277.6 gi|452208899|ref|YP_007489013.1| - 0.023 14.4 0.0 0.038 13.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) GntR PF00392.21 gi|452208899|ref|YP_007489013.1| - 0.029 14.0 0.3 0.084 12.5 0.0 2.0 2 0 0 2 2 1 0 Bacterial regulatory proteins, gntR family HTH_10 PF04967.12 gi|452208899|ref|YP_007489013.1| - 0.031 14.1 0.0 0.096 12.5 0.0 1.8 1 0 0 1 1 1 0 HTH DNA binding domain HTH_5 PF01022.20 gi|452208899|ref|YP_007489013.1| - 0.037 13.9 0.0 0.09 12.7 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family Phage_rep_O PF04492.13 gi|452208899|ref|YP_007489013.1| - 0.04 14.5 0.0 0.12 13.0 0.0 1.8 1 0 0 1 1 1 0 Bacteriophage replication protein O Mrr_N PF14338.6 gi|452208899|ref|YP_007489013.1| - 0.076 13.2 0.1 0.53 10.4 0.0 2.3 2 1 0 2 2 1 0 Mrr N-terminal domain TrmB PF01978.19 gi|452208899|ref|YP_007489013.1| - 0.077 12.9 0.1 0.2 11.6 0.1 1.7 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB AbiEi_4 PF13338.6 gi|452208899|ref|YP_007489013.1| - 0.12 12.6 0.0 0.33 11.1 0.0 1.8 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin TetR_C_7 PF14246.6 gi|452208899|ref|YP_007489013.1| - 0.15 12.1 0.0 0.31 11.1 0.0 1.5 1 0 0 1 1 1 0 AefR-like transcriptional repressor, C-terminal domain Metallophos_2 PF12850.7 gi|452208900|ref|YP_007489014.1| - 2e-10 41.1 0.0 2.5e-10 40.8 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain HH_signal PF01085.18 gi|452208903|ref|YP_007489017.1| - 0.00012 21.7 0.1 0.36 10.5 0.0 3.1 3 0 0 3 3 3 2 Hedgehog amino-terminal signalling domain POT1 PF02765.17 gi|452208903|ref|YP_007489017.1| - 0.003 17.4 0.0 2.5 7.9 0.0 2.4 2 0 0 2 2 2 2 Telomeric single stranded DNA binding POT1/CDC13 tRNA_anti-codon PF01336.25 gi|452208903|ref|YP_007489017.1| - 0.0081 16.1 0.1 0.2 11.6 0.0 2.6 2 0 0 2 2 2 1 OB-fold nucleic acid binding domain Sec-ASP3 PF15432.6 gi|452208903|ref|YP_007489017.1| - 0.13 12.4 0.0 6.8 6.9 0.0 2.5 2 0 0 2 2 2 0 Accessory Sec secretory system ASP3 OAR PF03826.17 gi|452208903|ref|YP_007489017.1| - 0.14 12.0 1.8 15 5.6 0.3 3.4 3 0 0 3 3 3 0 OAR domain Na_H_Exchanger PF00999.21 gi|452208904|ref|YP_007489018.1| - 5.5e-42 143.9 48.0 7.7e-42 143.4 48.0 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.18 gi|452208904|ref|YP_007489018.1| - 1.6e-25 89.6 0.1 3e-25 88.7 0.1 1.4 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.21 gi|452208904|ref|YP_007489018.1| - 8.9e-12 44.7 0.7 4e-11 42.6 0.1 2.3 2 0 0 2 2 2 1 TrkA-C domain NAD_binding_7 PF13241.6 gi|452208904|ref|YP_007489018.1| - 5.8e-06 26.7 0.4 1.5e-05 25.4 0.2 1.8 2 0 0 2 2 1 1 Putative NAD(P)-binding UDPG_MGDP_dh_N PF03721.14 gi|452208904|ref|YP_007489018.1| - 9.5e-05 22.1 0.6 0.00018 21.2 0.6 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Sacchrp_dh_NADP PF03435.18 gi|452208904|ref|YP_007489018.1| - 0.002 18.4 0.2 0.0035 17.6 0.2 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain ApbA PF02558.16 gi|452208904|ref|YP_007489018.1| - 0.0024 17.6 0.1 0.0042 16.7 0.1 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA SepA PF17080.5 gi|452208904|ref|YP_007489018.1| - 0.0027 18.1 1.6 0.0027 18.1 1.6 2.6 2 1 0 2 2 2 1 Multidrug Resistance efflux pump NAD_binding_2 PF03446.15 gi|452208904|ref|YP_007489018.1| - 0.005 17.0 0.1 0.01 16.0 0.1 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|452208904|ref|YP_007489018.1| - 0.0052 17.3 1.5 0.0071 16.9 0.3 2.0 2 0 0 2 2 1 1 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.18 gi|452208904|ref|YP_007489018.1| - 0.012 15.5 0.2 0.022 14.7 0.2 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|452208904|ref|YP_007489018.1| - 0.013 14.8 0.1 0.027 13.8 0.1 1.5 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.21 gi|452208904|ref|YP_007489018.1| - 0.071 12.4 0.3 0.15 11.4 0.3 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain FAD_binding_3 PF01494.19 gi|452208904|ref|YP_007489018.1| - 0.097 11.9 0.0 0.13 11.5 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain NmrA PF05368.13 gi|452208904|ref|YP_007489018.1| - 0.1 12.1 0.1 0.16 11.5 0.1 1.3 1 0 0 1 1 1 0 NmrA-like family Homoserine_dh PF00742.19 gi|452208904|ref|YP_007489018.1| - 0.12 12.3 0.0 3.7 7.4 0.0 2.4 2 0 0 2 2 2 0 Homoserine dehydrogenase Pyr_redox PF00070.27 gi|452208904|ref|YP_007489018.1| - 0.14 12.8 0.9 0.3 11.7 0.2 2.0 2 0 0 2 2 1 0 Pyridine nucleotide-disulphide oxidoreductase BPD_transp_1 PF00528.22 gi|452208905|ref|YP_007489019.1| - 5.5e-22 78.4 17.9 7.4e-22 78.0 17.7 1.3 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|452208906|ref|YP_007489020.1| - 1.9e-23 83.2 12.7 2.7e-23 82.7 12.7 1.2 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|452208908|ref|YP_007489022.1| - 3.4e-31 108.6 0.0 5.6e-31 107.9 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|452208908|ref|YP_007489022.1| - 1.2e-09 38.4 0.8 0.00014 21.7 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system CBS PF00571.28 gi|452208908|ref|YP_007489022.1| - 4.3e-05 23.9 0.0 0.081 13.4 0.0 2.6 2 0 0 2 2 2 2 CBS domain AAA_16 PF13191.6 gi|452208908|ref|YP_007489022.1| - 0.00023 21.6 0.0 0.00036 21.0 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|452208908|ref|YP_007489022.1| - 0.0012 18.5 0.0 0.0023 17.7 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.6 gi|452208908|ref|YP_007489022.1| - 0.0029 17.3 0.0 0.0058 16.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|452208908|ref|YP_007489022.1| - 0.0041 17.4 0.0 0.011 16.0 0.0 1.7 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 gi|452208908|ref|YP_007489022.1| - 0.0093 15.3 0.0 0.015 14.6 0.0 1.2 1 0 0 1 1 1 1 Zeta toxin AAA_15 PF13175.6 gi|452208908|ref|YP_007489022.1| - 0.012 15.4 0.0 0.018 14.7 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain cobW PF02492.19 gi|452208908|ref|YP_007489022.1| - 0.018 14.7 0.0 0.035 13.7 0.0 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain SMC_N PF02463.19 gi|452208908|ref|YP_007489022.1| - 0.018 14.5 0.0 0.75 9.2 0.0 2.1 1 1 0 2 2 2 0 RecF/RecN/SMC N terminal domain Mg_chelatase PF01078.21 gi|452208908|ref|YP_007489022.1| - 0.019 14.3 0.0 0.034 13.5 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI RsgA_GTPase PF03193.16 gi|452208908|ref|YP_007489022.1| - 0.059 13.3 0.0 0.094 12.6 0.0 1.3 1 0 0 1 1 1 0 RsgA GTPase TsaE PF02367.17 gi|452208908|ref|YP_007489022.1| - 0.1 12.6 0.0 0.35 10.9 0.0 1.8 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE NTPase_1 PF03266.15 gi|452208908|ref|YP_007489022.1| - 0.12 12.3 0.0 0.21 11.5 0.0 1.4 1 0 0 1 1 1 0 NTPase G-alpha PF00503.20 gi|452208908|ref|YP_007489022.1| - 0.12 11.5 0.0 0.13 11.4 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit AAA_5 PF07728.14 gi|452208908|ref|YP_007489022.1| - 0.13 12.3 0.0 0.26 11.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_33 PF13671.6 gi|452208908|ref|YP_007489022.1| - 0.19 11.9 0.0 0.37 10.9 0.0 1.8 1 1 0 1 1 1 0 AAA domain AAA_27 PF13514.6 gi|452208908|ref|YP_007489022.1| - 0.19 11.3 0.0 0.31 10.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|452208908|ref|YP_007489022.1| - 0.22 12.0 0.3 0.42 11.1 0.3 1.4 1 0 0 1 1 1 0 AAA domain OpuAC PF04069.12 gi|452208909|ref|YP_007489023.1| - 3.5e-16 59.6 0.0 3.8e-16 59.4 0.0 1.0 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system Lpp-LpqN PF10738.9 gi|452208909|ref|YP_007489023.1| - 0.13 11.7 0.0 0.35 10.3 0.0 1.6 1 1 1 2 2 2 0 Probable lipoprotein LpqN NTP_transferase PF00483.23 gi|452208911|ref|YP_007489025.1| - 2.4e-28 99.4 0.0 3.2e-28 99.0 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 gi|452208911|ref|YP_007489025.1| - 3.8e-15 54.9 26.5 8.5e-08 31.6 6.6 5.2 2 1 2 5 5 5 5 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 gi|452208911|ref|YP_007489025.1| - 5e-08 33.5 0.0 7.1e-08 33.0 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep_2 PF14602.6 gi|452208911|ref|YP_007489025.1| - 1.3e-05 24.8 24.3 4.5e-05 23.1 4.4 4.5 3 1 0 4 4 4 3 Hexapeptide repeat of succinyl-transferase AroM PF07302.11 gi|452208911|ref|YP_007489025.1| - 0.098 12.0 0.0 0.28 10.5 0.0 1.6 1 1 1 2 2 2 0 AroM protein DUF4954 PF16314.5 gi|452208911|ref|YP_007489025.1| - 1.1 7.3 7.3 1 7.4 2.3 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4954) SIS PF01380.22 gi|452208912|ref|YP_007489026.1| - 9.7e-58 193.7 1.4 1.1e-27 96.5 0.1 2.8 3 0 0 3 3 3 2 SIS domain GATase_6 PF13522.6 gi|452208912|ref|YP_007489026.1| - 7.7e-21 74.7 0.0 1.8e-20 73.5 0.0 1.6 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 gi|452208912|ref|YP_007489026.1| - 4.5e-16 58.9 0.0 1.3e-15 57.4 0.0 1.7 2 0 0 2 2 2 1 Glutamine amidotransferase domain GATase_4 PF13230.6 gi|452208912|ref|YP_007489026.1| - 2.8e-05 23.2 0.0 4.5e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferases class-II DUF5124 PF17160.4 gi|452208912|ref|YP_007489026.1| - 0.087 13.6 0.0 0.21 12.3 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF5124) PGM_PMM_I PF02878.16 gi|452208913|ref|YP_007489027.1| - 7.4e-38 129.4 0.0 1.4e-37 128.5 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|452208913|ref|YP_007489027.1| - 3.7e-28 98.1 0.0 9.5e-28 96.8 0.0 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.16 gi|452208913|ref|YP_007489027.1| - 5.7e-20 71.6 0.0 9.9e-20 70.8 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.20 gi|452208913|ref|YP_007489027.1| - 1.6e-10 41.0 0.1 3.9e-10 39.8 0.1 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain CinA_KH PF18146.1 gi|452208913|ref|YP_007489027.1| - 0.031 14.4 0.2 12 6.2 0.0 2.7 2 0 0 2 2 2 0 Damage-inducible protein CinA KH domain Methyltransf_23 PF13489.6 gi|452208913|ref|YP_007489027.1| - 0.19 11.5 0.0 0.54 10.1 0.0 1.8 1 1 0 1 1 1 0 Methyltransferase domain NTP_transferase PF00483.23 gi|452208914|ref|YP_007489028.1| - 2.7e-44 151.6 0.0 3.5e-44 151.2 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 gi|452208914|ref|YP_007489028.1| - 7.9e-15 53.9 23.0 9.6e-09 34.6 0.4 4.9 2 1 3 5 5 5 4 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 gi|452208914|ref|YP_007489028.1| - 1.2e-12 48.4 0.0 1.5e-12 48.2 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain DUF4954 PF16314.5 gi|452208914|ref|YP_007489028.1| - 2.4e-06 26.0 0.1 3.5e-06 25.5 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4954) Hexapep_2 PF14602.6 gi|452208914|ref|YP_007489028.1| - 1.1e-05 25.1 9.9 0.00098 18.8 1.2 4.7 4 1 2 6 6 6 2 Hexapeptide repeat of succinyl-transferase IspD PF01128.19 gi|452208914|ref|YP_007489028.1| - 0.00012 21.8 0.0 0.00042 20.1 0.0 1.8 2 0 0 2 2 2 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YfcL PF08891.11 gi|452208914|ref|YP_007489028.1| - 0.18 12.2 0.1 3.6 8.0 0.0 2.4 2 0 0 2 2 2 0 YfcL protein AAA PF00004.29 gi|452208917|ref|YP_007489031.1| - 1.9e-36 125.4 0.0 3.2e-36 124.7 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_2 PF07724.14 gi|452208917|ref|YP_007489031.1| - 1.3e-09 38.4 0.0 3.7e-09 36.9 0.0 1.7 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_lid_3 PF17862.1 gi|452208917|ref|YP_007489031.1| - 9e-06 25.4 0.2 1.9e-05 24.4 0.2 1.6 1 0 0 1 1 1 1 AAA+ lid domain AAA_22 PF13401.6 gi|452208917|ref|YP_007489031.1| - 1.5e-05 25.3 0.4 0.0013 19.0 0.0 2.5 1 1 1 2 2 2 1 AAA domain TIP49 PF06068.13 gi|452208917|ref|YP_007489031.1| - 1.9e-05 24.0 0.0 5.7e-05 22.5 0.0 1.7 1 1 1 2 2 2 1 TIP49 P-loop domain AAA_5 PF07728.14 gi|452208917|ref|YP_007489031.1| - 0.00011 22.2 0.0 0.00043 20.3 0.0 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|452208917|ref|YP_007489031.1| - 0.00014 22.3 0.2 0.0067 16.8 0.1 2.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_28 PF13521.6 gi|452208917|ref|YP_007489031.1| - 0.00042 20.6 0.0 0.0011 19.3 0.0 1.7 2 0 0 2 2 1 1 AAA domain RuvB_N PF05496.12 gi|452208917|ref|YP_007489031.1| - 0.00057 19.7 0.0 0.0017 18.1 0.0 1.9 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain IstB_IS21 PF01695.17 gi|452208917|ref|YP_007489031.1| - 0.00063 19.5 0.0 0.001 18.8 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_18 PF13238.6 gi|452208917|ref|YP_007489031.1| - 0.0016 18.9 0.0 0.0035 17.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 gi|452208917|ref|YP_007489031.1| - 0.0017 17.8 0.0 0.0033 16.8 0.0 1.5 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 gi|452208917|ref|YP_007489031.1| - 0.0027 17.3 0.1 0.023 14.2 0.0 2.0 2 0 0 2 2 2 1 P-loop containing dynein motor region DUF815 PF05673.13 gi|452208917|ref|YP_007489031.1| - 0.0032 16.7 0.0 0.0098 15.1 0.0 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF815) AAA_33 PF13671.6 gi|452208917|ref|YP_007489031.1| - 0.0034 17.6 0.0 0.0054 16.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain TsaE PF02367.17 gi|452208917|ref|YP_007489031.1| - 0.022 14.7 0.0 0.042 13.8 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Sigma54_activat PF00158.26 gi|452208917|ref|YP_007489031.1| - 0.026 14.2 0.0 0.062 13.0 0.0 1.6 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_24 PF13479.6 gi|452208917|ref|YP_007489031.1| - 0.027 14.2 0.1 0.052 13.3 0.1 1.5 1 1 0 1 1 1 0 AAA domain Bac_DnaA PF00308.18 gi|452208917|ref|YP_007489031.1| - 0.028 14.3 0.0 0.063 13.1 0.0 1.5 1 1 0 1 1 1 0 Bacterial dnaA protein TniB PF05621.11 gi|452208917|ref|YP_007489031.1| - 0.032 13.6 0.0 0.11 11.9 0.0 1.8 2 0 0 2 2 2 0 Bacterial TniB protein RNA_helicase PF00910.22 gi|452208917|ref|YP_007489031.1| - 0.033 14.6 0.0 0.076 13.4 0.0 1.7 1 0 0 1 1 1 0 RNA helicase Parvo_NS1 PF01057.17 gi|452208917|ref|YP_007489031.1| - 0.035 13.2 0.0 0.062 12.4 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 IPT PF01745.16 gi|452208917|ref|YP_007489031.1| - 0.041 13.3 0.0 0.077 12.4 0.0 1.4 1 0 0 1 1 1 0 Isopentenyl transferase PduV-EutP PF10662.9 gi|452208917|ref|YP_007489031.1| - 0.043 13.6 0.0 0.085 12.6 0.0 1.5 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation ABC_tran PF00005.27 gi|452208917|ref|YP_007489031.1| - 0.076 13.5 0.0 0.21 12.1 0.0 1.6 1 0 0 1 1 1 0 ABC transporter PhoH PF02562.16 gi|452208917|ref|YP_007489031.1| - 0.085 12.3 0.0 0.2 11.1 0.0 1.6 1 0 0 1 1 1 0 PhoH-like protein Torsin PF06309.11 gi|452208917|ref|YP_007489031.1| - 0.086 12.9 0.0 0.21 11.7 0.0 1.6 1 0 0 1 1 1 0 Torsin NACHT PF05729.12 gi|452208917|ref|YP_007489031.1| - 0.14 12.0 0.0 0.28 11.1 0.0 1.5 1 0 0 1 1 1 0 NACHT domain Cytidylate_kin PF02224.18 gi|452208917|ref|YP_007489031.1| - 0.17 11.6 0.2 0.66 9.7 0.0 2.0 3 0 0 3 3 3 0 Cytidylate kinase Lactamase_B_2 PF12706.7 gi|452208920|ref|YP_007489034.1| - 5e-21 75.1 0.0 3.2e-19 69.2 0.0 2.1 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|452208920|ref|YP_007489034.1| - 3.3e-08 33.8 0.0 1.1e-07 32.0 0.0 1.9 2 1 1 3 3 3 1 Metallo-beta-lactamase superfamily Lactamase_B_4 PF13691.6 gi|452208920|ref|YP_007489034.1| - 6.3e-05 22.6 0.0 0.00011 21.8 0.0 1.4 1 0 0 1 1 1 1 tRNase Z endonuclease NAD_binding_10 PF13460.6 gi|452208920|ref|YP_007489034.1| - 0.096 12.6 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 NAD(P)H-binding TP_methylase PF00590.20 gi|452208921|ref|YP_007489035.1| - 3.1e-55 187.4 0.2 3.6e-55 187.2 0.2 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases HEM4 PF02602.15 gi|452208922|ref|YP_007489036.1| - 7.4e-45 153.1 0.0 9.2e-45 152.8 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD Radical_SAM PF04055.21 gi|452208923|ref|YP_007489037.1| - 1.1e-23 84.5 0.0 6.6e-23 81.9 0.0 2.0 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|452208923|ref|YP_007489037.1| - 1.6e-10 41.4 0.0 3.2e-10 40.4 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|452208923|ref|YP_007489037.1| - 5.8e-07 29.7 0.0 1e-06 28.9 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain SPASM PF13186.6 gi|452208923|ref|YP_007489037.1| - 1.2e-05 25.7 0.1 3.9e-05 24.1 0.1 1.9 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain APH PF01636.23 gi|452208924|ref|YP_007489038.1| - 1.3e-28 100.6 0.0 1.5e-28 100.4 0.0 1.0 1 0 0 1 1 1 1 Phosphotransferase enzyme family Fructosamin_kin PF03881.14 gi|452208924|ref|YP_007489038.1| - 3.3e-05 23.2 0.0 4.5e-05 22.8 0.0 1.1 1 0 0 1 1 1 1 Fructosamine kinase APH PF01636.23 gi|452208925|ref|YP_007489039.1| - 8.4e-06 25.9 0.0 1.3e-05 25.2 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family RIO1 PF01163.22 gi|452208925|ref|YP_007489039.1| - 0.014 15.0 0.0 4.5 6.8 0.0 2.3 2 0 0 2 2 2 0 RIO1 family HAD_2 PF13419.6 gi|452208926|ref|YP_007489040.1| - 2.5e-14 53.8 0.0 8.9e-14 52.0 0.0 1.8 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|452208926|ref|YP_007489040.1| - 2.6e-05 24.6 0.0 7.6e-05 23.1 0.0 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|452208926|ref|YP_007489040.1| - 0.19 11.8 0.0 0.32 11.1 0.0 1.3 1 0 0 1 1 1 0 HAD-hyrolase-like HAD_2 PF13419.6 gi|452208927|ref|YP_007489041.1| - 3.2e-16 59.9 0.0 5.1e-16 59.3 0.0 1.4 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|452208927|ref|YP_007489041.1| - 8.9e-08 32.7 0.0 5.5e-07 30.1 0.0 2.2 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|452208927|ref|YP_007489041.1| - 5.2e-06 26.4 0.0 8.3e-06 25.8 0.0 1.3 1 0 0 1 1 1 1 HAD-hyrolase-like Put_Phosphatase PF06888.12 gi|452208927|ref|YP_007489041.1| - 0.15 11.5 0.0 0.63 9.4 0.0 1.8 2 0 0 2 2 2 0 Putative Phosphatase tRNA-synt_1 PF00133.22 gi|452208929|ref|YP_007489043.1| - 4.9e-134 447.8 2.4 7.3e-133 444.0 2.4 2.0 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|452208929|ref|YP_007489043.1| - 1.4e-35 122.5 0.0 2.9e-35 121.5 0.0 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|452208929|ref|YP_007489043.1| - 6.6e-23 81.1 0.0 3.3e-13 49.2 0.0 3.1 3 1 0 3 3 3 2 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|452208929|ref|YP_007489043.1| - 2.1e-06 27.3 0.0 0.0094 15.3 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.6 gi|452208929|ref|YP_007489043.1| - 4.8e-06 26.2 0.0 3.3e-05 23.5 0.0 2.2 2 1 1 3 3 3 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1f PF01921.18 gi|452208929|ref|YP_007489043.1| - 0.053 12.4 0.0 1 8.2 0.0 2.3 2 0 0 2 2 2 0 tRNA synthetases class I (K) tRNA-synt_1b PF00579.25 gi|452208929|ref|YP_007489043.1| - 0.099 11.9 0.0 0.35 10.1 0.0 1.7 2 0 0 2 2 2 0 tRNA synthetases class I (W and Y) Peptidase_M48_N PF16491.5 gi|452208930|ref|YP_007489044.1| - 0.091 12.7 2.7 0.1 12.5 2.7 1.0 1 0 0 1 1 1 0 CAAX prenyl protease N-terminal, five membrane helices DUF5640 PF18692.1 gi|452208931|ref|YP_007489045.1| - 0.01 15.9 0.2 0.039 14.0 0.2 2.0 1 0 0 1 1 1 1 Family of unknown function (DUF5640) T2SSE PF00437.20 gi|452208932|ref|YP_007489046.1| - 7.8e-44 149.8 0.0 1.2e-43 149.2 0.0 1.1 1 0 0 1 1 1 1 Type II/IV secretion system protein ABC_tran PF00005.27 gi|452208932|ref|YP_007489046.1| - 0.018 15.5 0.1 0.077 13.5 0.1 1.9 2 0 0 2 2 2 0 ABC transporter AAA_23 PF13476.6 gi|452208932|ref|YP_007489046.1| - 0.071 13.6 0.1 0.2 12.1 0.1 1.7 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 gi|452208932|ref|YP_007489046.1| - 0.088 12.3 0.0 5.2 6.5 0.0 2.4 2 0 0 2 2 2 0 P-loop containing dynein motor region ATPase PF06745.13 gi|452208933|ref|YP_007489047.1| - 2e-25 89.5 0.2 2.3e-25 89.3 0.2 1.0 1 0 0 1 1 1 1 KaiC PAXNEB PF05625.11 gi|452208933|ref|YP_007489047.1| - 1.4e-10 40.9 0.9 6.8e-07 28.7 0.1 2.1 2 0 0 2 2 2 2 PAXNEB protein Rad51 PF08423.11 gi|452208933|ref|YP_007489047.1| - 5.3e-07 29.2 0.2 1.4e-06 27.7 0.2 1.7 1 1 0 1 1 1 1 Rad51 DUF835 PF05763.12 gi|452208933|ref|YP_007489047.1| - 7.3e-05 22.5 0.1 0.00013 21.8 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF835) AAA_25 PF13481.6 gi|452208933|ref|YP_007489047.1| - 0.0008 19.0 0.0 0.0045 16.6 0.0 2.1 1 1 0 1 1 1 1 AAA domain Elong_Iki1 PF10483.9 gi|452208933|ref|YP_007489047.1| - 0.00086 18.9 0.1 0.00096 18.7 0.1 1.2 1 0 0 1 1 1 1 Elongator subunit Iki1 AAA_22 PF13401.6 gi|452208933|ref|YP_007489047.1| - 0.0019 18.5 0.0 0.003 17.8 0.0 1.3 1 0 0 1 1 1 1 AAA domain DnaB_C PF03796.15 gi|452208933|ref|YP_007489047.1| - 0.01 15.2 0.1 0.17 11.2 0.0 2.3 2 1 1 3 3 3 0 DnaB-like helicase C terminal domain Rsd_AlgQ PF04353.13 gi|452208933|ref|YP_007489047.1| - 0.018 15.0 0.2 0.029 14.3 0.2 1.4 1 0 0 1 1 1 0 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AAA_24 PF13479.6 gi|452208933|ref|YP_007489047.1| - 0.022 14.5 0.1 0.056 13.2 0.0 1.7 1 1 1 2 2 2 0 AAA domain RecA PF00154.21 gi|452208933|ref|YP_007489047.1| - 0.024 14.1 0.1 0.11 12.0 0.0 1.8 2 0 0 2 2 2 0 recA bacterial DNA recombination protein AAA_14 PF13173.6 gi|452208933|ref|YP_007489047.1| - 0.031 14.3 0.3 0.53 10.3 0.3 2.3 1 1 0 1 1 1 0 AAA domain Arch_flagellin PF01917.16 gi|452208934|ref|YP_007489048.1| - 2.9e-05 24.3 1.5 4.6e-05 23.7 1.5 1.4 1 1 0 1 1 1 1 Archaebacterial flagellin TMEM240 PF15207.6 gi|452208934|ref|YP_007489048.1| - 0.078 12.7 0.2 0.099 12.3 0.2 1.2 1 0 0 1 1 1 0 TMEM240 family Arch_flagellin PF01917.16 gi|452208935|ref|YP_007489049.1| - 1.5e-11 44.8 0.2 1.8e-11 44.5 0.2 1.1 1 0 0 1 1 1 1 Archaebacterial flagellin Ribosomal_60s PF00428.19 gi|452208936|ref|YP_007489050.1| - 0.035 14.7 1.5 0.082 13.5 1.5 1.6 1 0 0 1 1 1 0 60s Acidic ribosomal protein CLZ PF16526.5 gi|452208936|ref|YP_007489050.1| - 0.71 10.3 0.1 0.71 10.3 0.1 2.7 3 0 0 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Arch_flagellin PF01917.16 gi|452208937|ref|YP_007489051.1| - 8.8e-42 143.1 4.4 1e-41 142.9 4.4 1.0 1 0 0 1 1 1 1 Archaebacterial flagellin Arch_flagellin PF01917.16 gi|452208938|ref|YP_007489052.1| - 1.6e-18 67.4 0.6 1.9e-18 67.2 0.6 1.1 1 0 0 1 1 1 1 Archaebacterial flagellin CheR PF01739.18 gi|452208939|ref|YP_007489053.1| - 1.4e-58 197.6 0.0 1.8e-58 197.3 0.0 1.1 1 0 0 1 1 1 1 CheR methyltransferase, SAM binding domain CheR_N PF03705.15 gi|452208939|ref|YP_007489053.1| - 1.9e-12 46.7 1.0 3.3e-12 45.9 1.0 1.4 1 0 0 1 1 1 1 CheR methyltransferase, all-alpha domain Methyltransf_25 PF13649.6 gi|452208939|ref|YP_007489053.1| - 3.6e-06 27.6 0.0 4.3e-05 24.1 0.0 2.2 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|452208939|ref|YP_007489053.1| - 0.00041 21.1 0.0 0.0016 19.1 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|452208939|ref|YP_007489053.1| - 0.0016 19.1 0.0 0.0059 17.2 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|452208939|ref|YP_007489053.1| - 0.0023 17.8 0.0 0.003 17.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|452208939|ref|YP_007489053.1| - 0.0051 16.6 0.0 0.013 15.3 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain CheD PF03975.13 gi|452208940|ref|YP_007489054.1| - 3.9e-30 104.2 0.2 5.5e-30 103.7 0.2 1.2 1 0 0 1 1 1 1 CheD chemotactic sensory transduction CheC PF04509.12 gi|452208941|ref|YP_007489055.1| - 6e-24 83.7 0.2 8.3e-13 48.0 0.0 2.6 2 0 0 2 2 2 2 CheC-like family CheX PF13690.6 gi|452208941|ref|YP_007489055.1| - 3.4e-12 46.4 0.3 6.5e-07 29.4 0.1 2.3 2 0 0 2 2 2 2 Chemotaxis phosphatase CheX CheW PF01584.19 gi|452208942|ref|YP_007489056.1| - 7.9e-27 93.6 1.4 9.2e-26 90.1 0.5 2.6 2 0 0 2 2 2 1 CheW-like domain HATPase_c PF02518.26 gi|452208942|ref|YP_007489056.1| - 2.6e-17 63.3 0.4 8.2e-17 61.7 0.2 2.0 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase P2 PF07194.11 gi|452208942|ref|YP_007489056.1| - 8e-16 57.9 0.5 8e-16 57.9 0.5 2.3 2 0 0 2 2 2 1 P2 response regulator binding domain Hpt PF01627.23 gi|452208942|ref|YP_007489056.1| - 1.3e-15 57.4 0.0 4.1e-15 55.8 0.0 2.0 1 0 0 1 1 1 1 Hpt domain H-kinase_dim PF02895.14 gi|452208942|ref|YP_007489056.1| - 1e-13 51.5 2.4 6e-13 49.0 0.9 2.6 2 0 0 2 2 2 1 Signal transducing histidine kinase, homodimeric domain HATPase_c_3 PF13589.6 gi|452208942|ref|YP_007489056.1| - 0.0002 21.2 0.2 0.0014 18.5 0.2 2.2 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.6 gi|452208942|ref|YP_007489056.1| - 0.0019 18.0 1.0 0.0065 16.3 0.2 2.3 2 1 0 2 2 2 1 GHKL domain DUF5355 PF17306.2 gi|452208942|ref|YP_007489056.1| - 0.02 13.9 0.2 0.044 12.8 0.2 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5355) DNA_PPF PF02916.15 gi|452208942|ref|YP_007489056.1| - 9.9 6.6 8.8 0.3 11.5 0.3 2.7 3 0 0 3 3 3 0 DNA polymerase processivity factor CheB_methylest PF01339.17 gi|452208943|ref|YP_007489057.1| - 1.2e-54 184.6 0.1 1.7e-54 184.1 0.1 1.2 1 0 0 1 1 1 1 CheB methylesterase Response_reg PF00072.24 gi|452208943|ref|YP_007489057.1| - 2.2e-23 82.6 0.5 5.2e-23 81.4 0.5 1.6 1 0 0 1 1 1 1 Response regulator receiver domain MTD PF01993.18 gi|452208943|ref|YP_007489057.1| - 0.0024 17.2 0.7 0.064 12.6 0.2 2.2 1 1 1 2 2 2 1 methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase Lipase_GDSL PF00657.22 gi|452208943|ref|YP_007489057.1| - 0.017 15.1 0.0 0.027 14.5 0.0 1.2 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase Response_reg PF00072.24 gi|452208944|ref|YP_007489058.1| - 3e-30 104.7 1.1 3.4e-30 104.5 1.1 1.0 1 0 0 1 1 1 1 Response regulator receiver domain CheF-arch PF04283.12 gi|452208945|ref|YP_007489059.1| - 4.1e-16 59.4 0.3 8.8e-16 58.3 0.3 1.5 1 1 0 1 1 1 1 Chemotaxis signal transduction system protein F from archaea HTH_45 PF14947.6 gi|452208945|ref|YP_007489059.1| - 0.00051 20.0 0.1 0.017 15.1 0.0 2.9 2 2 1 3 3 3 1 Winged helix-turn-helix Flavi_NS5 PF00972.20 gi|452208945|ref|YP_007489059.1| - 0.017 13.3 0.0 0.017 13.3 0.0 1.1 1 0 0 1 1 1 0 Flavivirus RNA-directed RNA polymerase DNA_pol3_a_NI PF14480.6 gi|452208945|ref|YP_007489059.1| - 0.053 13.5 1.6 0.11 12.4 0.8 1.9 2 0 0 2 2 2 0 DNA polymerase III polC-type N-terminus I CheW PF01584.19 gi|452208946|ref|YP_007489060.1| - 2.8e-37 127.5 0.2 3.1e-37 127.3 0.2 1.0 1 0 0 1 1 1 1 CheW-like domain Phage_TAC_3 PF06896.11 gi|452208946|ref|YP_007489060.1| - 0.0086 16.7 0.2 0.02 15.4 0.2 1.6 1 1 1 2 2 2 1 Phage tail assembly chaperone proteins, TAC MCPsignal PF00015.21 gi|452208947|ref|YP_007489061.1| - 1.5e-40 138.8 44.1 8.7e-40 136.3 19.2 3.7 2 1 2 4 4 4 3 Methyl-accepting chemotaxis protein (MCP) signalling domain PAS_3 PF08447.12 gi|452208947|ref|YP_007489061.1| - 3.9e-15 55.9 0.0 1.9e-14 53.7 0.0 2.3 2 0 0 2 2 2 1 PAS fold PAS_9 PF13426.7 gi|452208947|ref|YP_007489061.1| - 1.2e-10 41.6 0.0 7.1e-06 26.2 0.0 2.8 2 0 0 2 2 2 2 PAS domain PAS_4 PF08448.10 gi|452208947|ref|YP_007489061.1| - 2e-10 40.9 0.0 0.00034 20.9 0.0 2.6 2 0 0 2 2 2 2 PAS fold PAS PF00989.25 gi|452208947|ref|YP_007489061.1| - 5.7e-09 36.0 0.1 1.3e-05 25.1 0.0 3.2 4 0 0 4 4 3 2 PAS fold DUF948 PF06103.11 gi|452208947|ref|YP_007489061.1| - 7.2e-05 23.0 32.4 0.26 11.6 3.0 5.6 3 2 2 5 5 5 3 Bacterial protein of unknown function (DUF948) HAMP PF00672.25 gi|452208947|ref|YP_007489061.1| - 0.0047 17.3 3.4 7 7.1 0.0 4.7 5 0 0 5 5 4 1 HAMP domain BLOC1_2 PF10046.9 gi|452208947|ref|YP_007489061.1| - 0.21 11.9 0.1 0.21 11.9 0.1 5.5 3 2 2 5 5 5 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF489 PF04356.12 gi|452208947|ref|YP_007489061.1| - 0.38 10.7 9.1 0.21 11.6 4.1 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF489) Laminin_II PF06009.12 gi|452208947|ref|YP_007489061.1| - 0.91 9.5 36.6 0.35 10.9 6.0 5.3 2 2 2 5 5 5 0 Laminin Domain II APG17 PF04108.12 gi|452208947|ref|YP_007489061.1| - 0.92 8.6 22.6 0.15 11.1 2.4 2.9 1 1 0 2 2 2 0 Autophagy protein Apg17 FUSC PF04632.12 gi|452208947|ref|YP_007489061.1| - 1 7.8 7.2 3.7 6.0 0.7 2.1 1 1 1 2 2 2 0 Fusaric acid resistance protein family Prominin PF05478.11 gi|452208947|ref|YP_007489061.1| - 1.1 7.1 21.9 0.14 10.1 5.6 2.4 2 1 0 2 2 2 0 Prominin IL22 PF14565.6 gi|452208947|ref|YP_007489061.1| - 1.4 9.2 4.0 2.3 8.5 0.1 3.1 4 0 0 4 4 4 0 Interleukin 22 IL-10-related T-cell-derived-inducible factor Fib_alpha PF08702.10 gi|452208947|ref|YP_007489061.1| - 2 8.6 27.4 0.22 11.7 4.8 4.6 3 2 2 5 5 5 0 Fibrinogen alpha/beta chain family ING PF12998.7 gi|452208947|ref|YP_007489061.1| - 2.2 8.9 16.5 1.1 9.9 0.9 4.5 2 2 2 4 4 4 0 Inhibitor of growth proteins N-terminal histone-binding Abi_C PF14355.6 gi|452208947|ref|YP_007489061.1| - 4.3 7.5 10.6 1.3 9.2 0.3 4.3 5 0 0 5 5 5 0 Abortive infection C-terminus DUF677 PF05055.12 gi|452208947|ref|YP_007489061.1| - 4.6 6.0 25.0 0.12 11.2 1.3 3.8 2 2 1 4 4 4 0 Protein of unknown function (DUF677) Ufd2P_core PF10408.9 gi|452208947|ref|YP_007489061.1| - 9.5 4.7 13.0 0.57 8.7 4.2 2.4 2 1 0 2 2 2 0 Ubiquitin elongating factor core DrsE PF02635.15 gi|452208948|ref|YP_007489062.1| - 2e-10 41.1 0.0 2.3e-10 40.9 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family DrsE_2 PF13686.6 gi|452208948|ref|YP_007489062.1| - 6.5e-09 35.9 0.1 6.6e-09 35.8 0.1 1.1 1 0 0 1 1 1 1 DsrE/DsrF/DrsH-like family HMG-CoA_red PF00368.18 gi|452208949|ref|YP_007489063.1| - 9.7e-138 459.1 2.5 1.1e-137 459.0 2.5 1.0 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A reductase Phos_pyr_kin PF08543.12 gi|452208951|ref|YP_007489065.1| - 5.1e-81 271.7 5.4 7.2e-81 271.2 5.4 1.2 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase ThiP_synth PF10120.9 gi|452208951|ref|YP_007489065.1| - 8.1e-63 210.9 0.5 1.4e-62 210.2 0.5 1.4 1 0 0 1 1 1 1 Thiamine-phosphate synthase PfkB PF00294.24 gi|452208951|ref|YP_007489065.1| - 2.2e-10 40.4 1.5 3.4e-10 39.7 1.5 1.3 1 0 0 1 1 1 1 pfkB family carbohydrate kinase HK PF02110.15 gi|452208951|ref|YP_007489065.1| - 3.1e-05 23.5 0.9 6.6e-05 22.4 0.9 1.4 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family LSM PF01423.22 gi|452208952|ref|YP_007489066.1| - 3.5e-21 74.7 0.1 3.8e-21 74.6 0.1 1.0 1 0 0 1 1 1 1 LSM domain Ribosomal_L37e PF01907.19 gi|452208953|ref|YP_007489067.1| - 2e-20 72.7 15.1 2.2e-20 72.6 15.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L37e Zn_Tnp_IS91 PF14319.6 gi|452208953|ref|YP_007489067.1| - 0.02 14.9 4.5 0.021 14.8 4.5 1.1 1 0 0 1 1 1 0 Transposase zinc-binding domain zn-ribbon_14 PF16503.5 gi|452208953|ref|YP_007489067.1| - 0.41 10.2 0.2 0.41 10.2 0.2 2.5 3 0 0 3 3 3 0 Zinc-ribbon YhfH PF14149.6 gi|452208953|ref|YP_007489067.1| - 0.45 10.5 5.3 0.8 9.7 0.3 2.3 1 1 1 2 2 2 0 YhfH-like protein Med16 PF11635.8 gi|452208953|ref|YP_007489067.1| - 2.9 5.7 6.6 2.8 5.8 6.6 1.0 1 0 0 1 1 1 0 Mediator complex subunit 16 GATase_7 PF13537.6 gi|452208954|ref|YP_007489068.1| - 6.2e-20 71.3 0.0 1e-19 70.7 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 gi|452208954|ref|YP_007489068.1| - 6.8e-18 65.2 0.0 1.9e-17 63.7 0.0 1.7 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_4 PF13230.6 gi|452208954|ref|YP_007489068.1| - 2.8e-08 33.0 0.0 5.9e-08 31.9 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferases class-II Pribosyltran PF00156.27 gi|452208954|ref|YP_007489068.1| - 9.6e-06 25.2 0.1 1.8e-05 24.3 0.1 1.4 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Rot1 PF10681.9 gi|452208954|ref|YP_007489068.1| - 0.24 10.9 0.0 7 6.1 0.0 2.1 2 0 0 2 2 2 0 Chaperone for protein-folding within the ER, fungal UPF0047 PF01894.17 gi|452208955|ref|YP_007489069.1| - 1.3e-38 131.7 0.0 1.7e-38 131.3 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 DUF2113 PF09886.9 gi|452208955|ref|YP_007489069.1| - 0.082 12.2 0.1 0.12 11.7 0.1 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2113) TrmB PF01978.19 gi|452208957|ref|YP_007489071.1| - 1.8e-22 79.0 0.1 6.2e-22 77.3 0.0 1.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Penicillinase_R PF03965.16 gi|452208957|ref|YP_007489071.1| - 0.00022 21.5 0.0 0.00027 21.3 0.0 1.1 1 0 0 1 1 1 1 Penicillinase repressor MarR_2 PF12802.7 gi|452208957|ref|YP_007489071.1| - 0.0024 17.7 0.0 0.005 16.7 0.0 1.6 2 0 0 2 2 2 1 MarR family HTH_9 PF08221.11 gi|452208957|ref|YP_007489071.1| - 0.0069 16.5 0.0 0.011 15.9 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase III subunit RPC82 helix-turn-helix domain Rrf2 PF02082.20 gi|452208957|ref|YP_007489071.1| - 0.0083 16.4 0.0 0.015 15.6 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator PadR PF03551.14 gi|452208957|ref|YP_007489071.1| - 0.019 14.9 0.3 0.19 11.7 0.0 2.4 2 1 1 3 3 3 0 Transcriptional regulator PadR-like family HTH_34 PF13601.6 gi|452208957|ref|YP_007489071.1| - 0.044 14.0 0.0 0.1 12.8 0.0 1.6 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_46 PF15977.5 gi|452208957|ref|YP_007489071.1| - 0.11 12.6 0.0 0.25 11.4 0.0 1.6 2 0 0 2 2 2 0 Winged helix-turn-helix DNA binding YflT PF11181.8 gi|452208957|ref|YP_007489071.1| - 0.11 13.1 0.1 0.84 10.2 0.0 2.1 2 0 0 2 2 2 0 Heat induced stress protein YflT MarR PF01047.22 gi|452208958|ref|YP_007489072.1| - 1.1e-10 41.3 0.0 2.1e-10 40.3 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|452208958|ref|YP_007489072.1| - 2.9e-08 34.1 0.5 2.7e-07 31.0 0.1 2.3 2 1 1 3 3 3 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|452208958|ref|YP_007489072.1| - 6.3e-05 22.8 0.0 0.0001 22.1 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.6 gi|452208958|ref|YP_007489072.1| - 0.00064 19.9 0.0 0.0015 18.6 0.0 1.6 1 1 0 1 1 1 1 Winged helix DNA-binding domain RPAP1_N PF08621.10 gi|452208958|ref|YP_007489072.1| - 0.011 15.5 0.7 0.026 14.3 0.7 1.7 1 0 0 1 1 1 0 RPAP1-like, N-terminal Cytochrom_B562 PF07361.11 gi|452208958|ref|YP_007489072.1| - 0.015 15.9 0.0 0.023 15.3 0.0 1.5 1 0 0 1 1 1 0 Cytochrome b562 HxlR PF01638.17 gi|452208958|ref|YP_007489072.1| - 0.03 14.2 0.1 0.066 13.1 0.1 1.6 1 1 0 1 1 1 0 HxlR-like helix-turn-helix HTH_45 PF14947.6 gi|452208958|ref|YP_007489072.1| - 0.044 13.8 0.0 0.11 12.5 0.0 1.7 1 1 0 1 1 1 0 Winged helix-turn-helix Glu-tRNAGln PF02686.15 gi|452208958|ref|YP_007489072.1| - 0.062 13.6 0.2 0.14 12.5 0.2 1.6 1 0 0 1 1 1 0 Glu-tRNAGln amidotransferase C subunit PadR PF03551.14 gi|452208958|ref|YP_007489072.1| - 0.089 12.8 0.2 0.29 11.1 0.0 1.9 1 1 1 2 2 2 0 Transcriptional regulator PadR-like family CDC48_2 PF02933.17 gi|452208959|ref|YP_007489073.1| - 0.16 11.8 0.0 0.28 11.0 0.0 1.3 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), domain 2 MatE PF01554.18 gi|452208960|ref|YP_007489074.1| - 1.3e-48 164.7 43.7 1.2e-26 93.3 9.7 3.2 4 0 0 4 4 4 2 MatE Polysacc_synt_C PF14667.6 gi|452208960|ref|YP_007489074.1| - 4.6e-11 43.0 28.6 1e-10 41.9 12.6 4.6 3 2 1 4 4 4 2 Polysaccharide biosynthesis C-terminal domain TraS PF10624.9 gi|452208960|ref|YP_007489074.1| - 0.055 13.4 1.9 0.16 11.9 1.9 1.9 1 0 0 1 1 1 0 Plasmid conjugative transfer entry exclusion protein TraS Rhodanese PF00581.20 gi|452208962|ref|YP_007489076.1| - 1.3e-39 135.0 0.0 2e-18 66.9 0.0 2.1 2 0 0 2 2 2 2 Rhodanese-like domain DUF442 PF04273.13 gi|452208962|ref|YP_007489076.1| - 1e-05 25.6 0.0 0.14 12.3 0.0 2.4 2 0 0 2 2 2 2 Putative phosphatase (DUF442) ThiC-associated PF13667.6 gi|452208962|ref|YP_007489076.1| - 0.013 15.3 0.0 1.4 8.8 0.0 2.2 2 0 0 2 2 2 0 ThiC-associated domain DSPc PF00782.20 gi|452208962|ref|YP_007489076.1| - 0.11 12.3 0.0 5.9 6.7 0.0 2.3 2 0 0 2 2 2 0 Dual specificity phosphatase, catalytic domain SecD-TM1 PF13721.6 gi|452208963|ref|YP_007489077.1| - 0.18 12.3 1.7 11 6.6 0.1 3.0 3 0 0 3 3 3 0 SecD export protein N-terminal TM region ELFV_dehydrog PF00208.21 gi|452208965|ref|YP_007489079.1| - 4.5e-58 196.8 0.0 5.6e-58 196.5 0.0 1.1 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.18 gi|452208965|ref|YP_007489079.1| - 5.1e-20 71.7 0.0 8.6e-20 70.9 0.0 1.3 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 2-Hacid_dh_C PF02826.19 gi|452208965|ref|YP_007489079.1| - 0.014 14.8 0.1 0.026 13.9 0.1 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Bac_GDH PF05088.12 gi|452208965|ref|YP_007489079.1| - 0.036 11.6 0.0 0.053 11.0 0.0 1.1 1 0 0 1 1 1 0 Bacterial NAD-glutamate dehydrogenase Gp_dh_N PF00044.24 gi|452208965|ref|YP_007489079.1| - 0.05 13.9 0.1 0.21 12.0 0.0 2.0 2 0 0 2 2 2 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AdoHcyase_NAD PF00670.21 gi|452208965|ref|YP_007489079.1| - 0.053 13.6 0.1 0.1 12.7 0.1 1.4 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KH_7 PF17214.3 gi|452208965|ref|YP_007489079.1| - 0.062 13.3 0.0 0.14 12.2 0.0 1.5 1 0 0 1 1 1 0 KH domain NAD_binding_7 PF13241.6 gi|452208965|ref|YP_007489079.1| - 0.15 12.5 0.1 0.36 11.3 0.1 1.8 1 1 0 1 1 1 0 Putative NAD(P)-binding Succ_CoA_lig PF13607.6 gi|452208966|ref|YP_007489080.1| - 7.8e-49 165.0 1.0 4e-48 162.7 0.7 2.2 2 0 0 2 2 2 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 gi|452208966|ref|YP_007489080.1| - 6.1e-22 78.3 0.0 2.2e-20 73.3 0.0 3.0 3 1 0 3 3 3 1 CoA binding domain CoA_binding PF02629.19 gi|452208966|ref|YP_007489080.1| - 3.5e-11 43.6 0.0 1.6e-09 38.3 0.0 3.2 4 0 0 4 4 4 1 CoA binding domain HEM4 PF02602.15 gi|452208966|ref|YP_007489080.1| - 0.015 14.7 0.2 0.23 10.8 0.1 2.7 2 1 1 3 3 3 0 Uroporphyrinogen-III synthase HemD SAP PF02037.27 gi|452208966|ref|YP_007489080.1| - 0.2 11.5 0.3 7.4 6.4 0.0 2.9 3 0 0 3 3 3 0 SAP domain HxlR PF01638.17 gi|452208967|ref|YP_007489081.1| - 3.1e-20 71.8 0.3 3.7e-20 71.6 0.3 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix PadR PF03551.14 gi|452208967|ref|YP_007489081.1| - 0.02 14.8 0.0 0.031 14.2 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family DUF2513 PF10711.9 gi|452208967|ref|YP_007489081.1| - 0.04 14.2 0.0 0.055 13.8 0.0 1.2 1 0 0 1 1 1 0 Hypothetical protein (DUF2513) DUF4423 PF14394.6 gi|452208967|ref|YP_007489081.1| - 0.049 13.3 0.0 0.064 13.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_45 PF14947.6 gi|452208967|ref|YP_007489081.1| - 0.093 12.7 0.1 0.18 11.8 0.1 1.5 1 1 0 1 1 1 0 Winged helix-turn-helix Replic_Relax PF13814.6 gi|452208967|ref|YP_007489081.1| - 0.17 11.9 0.0 0.19 11.8 0.0 1.1 1 0 0 1 1 1 0 Replication-relaxation NIR_SIR PF01077.22 gi|452208968|ref|YP_007489082.1| - 7.8e-29 100.2 0.0 4.4e-28 97.8 0.0 1.8 2 0 0 2 2 2 1 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.17 gi|452208968|ref|YP_007489082.1| - 1.6e-16 59.9 0.0 3.6e-16 58.8 0.0 1.6 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain HxlR PF01638.17 gi|452208969|ref|YP_007489083.1| - 5.7e-24 83.8 0.4 7e-24 83.5 0.4 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix PadR PF03551.14 gi|452208969|ref|YP_007489083.1| - 0.00061 19.7 0.0 0.00099 19.0 0.0 1.5 1 1 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_34 PF13601.6 gi|452208969|ref|YP_007489083.1| - 0.0016 18.5 0.1 0.0022 18.2 0.1 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_45 PF14947.6 gi|452208969|ref|YP_007489083.1| - 0.0055 16.7 0.1 0.0099 15.8 0.1 1.5 1 1 0 1 1 1 1 Winged helix-turn-helix DUF4423 PF14394.6 gi|452208969|ref|YP_007489083.1| - 0.021 14.6 0.1 0.025 14.3 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) DUF2513 PF10711.9 gi|452208969|ref|YP_007489083.1| - 0.049 13.9 0.3 0.068 13.5 0.3 1.2 1 0 0 1 1 1 0 Hypothetical protein (DUF2513) DUF438 PF04282.13 gi|452208969|ref|YP_007489083.1| - 0.12 12.4 0.6 0.21 11.5 0.6 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF438) Rrf2 PF02082.20 gi|452208969|ref|YP_007489083.1| - 0.13 12.7 0.0 0.21 12.0 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator NIR_SIR PF01077.22 gi|452208970|ref|YP_007489084.1| - 8.2e-31 106.7 0.0 1.7e-30 105.6 0.0 1.5 2 0 0 2 2 2 1 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.17 gi|452208970|ref|YP_007489084.1| - 1.9e-13 50.1 0.0 3.8e-13 49.1 0.0 1.5 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain Cupin_2 PF07883.11 gi|452208971|ref|YP_007489085.1| - 2.9e-14 52.5 0.1 3.9e-14 52.1 0.1 1.2 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 gi|452208971|ref|YP_007489085.1| - 0.017 15.0 0.0 0.023 14.6 0.0 1.2 1 0 0 1 1 1 0 AraC-like ligand binding domain DUF4585 PF15232.6 gi|452208971|ref|YP_007489085.1| - 0.022 14.8 0.0 0.07 13.2 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4585) MannoseP_isomer PF01050.18 gi|452208971|ref|YP_007489085.1| - 0.06 13.2 0.0 0.072 13.0 0.0 1.1 1 0 0 1 1 1 0 Mannose-6-phosphate isomerase Pirin_C PF05726.13 gi|452208971|ref|YP_007489085.1| - 0.12 12.7 0.0 0.16 12.3 0.0 1.2 1 0 0 1 1 1 0 Pirin C-terminal cupin domain CGGC PF08821.11 gi|452208972|ref|YP_007489086.1| - 1e-36 125.3 1.6 1.1e-36 125.2 1.6 1.0 1 0 0 1 1 1 1 CGGC domain Glyco_transf_4 PF13439.6 gi|452208972|ref|YP_007489086.1| - 0.072 13.1 0.0 0.072 13.1 0.0 1.3 1 0 0 1 1 1 0 Glycosyltransferase Family 4 zf-C2H2 PF00096.26 gi|452208972|ref|YP_007489086.1| - 0.37 11.3 3.2 3.7 8.2 0.2 2.5 2 0 0 2 2 2 0 Zinc finger, C2H2 type Fer4_21 PF14697.6 gi|452208974|ref|YP_007489088.1| - 1.4e-08 34.7 7.8 1.4e-08 34.7 7.8 2.3 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|452208974|ref|YP_007489088.1| - 2.2e-07 30.6 9.3 6.5e-06 26.0 4.0 3.4 5 0 0 5 5 5 2 4Fe-4S binding domain Fer4 PF00037.27 gi|452208974|ref|YP_007489088.1| - 3.7e-07 29.7 11.9 1.6e-05 24.5 5.1 3.3 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|452208974|ref|YP_007489088.1| - 9.6e-07 29.3 11.7 0.0011 19.5 1.0 2.9 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452208974|ref|YP_007489088.1| - 1.4e-06 28.3 18.8 3.6e-05 23.8 7.5 3.0 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452208974|ref|YP_007489088.1| - 2.9e-06 28.1 13.0 0.0013 19.6 3.0 2.7 2 1 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|452208974|ref|YP_007489088.1| - 1.1e-05 25.4 9.0 1.1e-05 25.4 9.0 2.8 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452208974|ref|YP_007489088.1| - 0.00014 21.8 13.4 0.00016 21.6 2.0 3.9 4 0 0 4 4 4 1 4Fe-4S binding domain Fer4_15 PF13459.6 gi|452208974|ref|YP_007489088.1| - 0.00091 19.9 11.5 0.0032 18.2 1.5 2.9 2 1 2 4 4 3 2 4Fe-4S single cluster domain Fer4_17 PF13534.6 gi|452208974|ref|YP_007489088.1| - 0.0016 18.9 8.2 0.21 12.2 0.7 2.9 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|452208974|ref|YP_007489088.1| - 0.082 13.8 1.8 0.082 13.8 1.8 3.2 3 1 0 3 3 3 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|452208974|ref|YP_007489088.1| - 0.45 11.1 17.9 0.16 12.6 4.2 3.8 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_19 PF06902.11 gi|452208974|ref|YP_007489088.1| - 1 9.5 6.4 24 5.1 6.4 3.1 1 1 0 1 1 1 0 Divergent 4Fe-4S mono-cluster Fer4_13 PF13370.6 gi|452208974|ref|YP_007489088.1| - 7 7.3 11.9 0.59 10.7 3.0 2.7 2 1 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_8 PF13183.6 gi|452208974|ref|YP_007489088.1| - 7.1 7.2 17.3 1.3e+03 -0.0 17.3 3.1 1 1 0 1 1 1 0 4Fe-4S dicluster domain CMD PF02627.20 gi|452208975|ref|YP_007489089.1| - 2e-06 27.7 0.1 2.2e-06 27.6 0.1 1.0 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family SapB_1 PF05184.15 gi|452208975|ref|YP_007489089.1| - 0.023 14.7 0.2 0.038 14.0 0.1 1.4 2 0 0 2 2 2 0 Saposin-like type B, region 1 PDT PF00800.18 gi|452208976|ref|YP_007489090.1| - 1.5e-53 181.4 0.0 1.9e-53 181.0 0.0 1.2 1 0 0 1 1 1 1 Prephenate dehydratase ACT PF01842.25 gi|452208976|ref|YP_007489090.1| - 2.7e-12 46.2 0.0 1.5e-11 43.8 0.0 2.1 2 0 0 2 2 2 1 ACT domain ACT_4 PF13291.6 gi|452208976|ref|YP_007489090.1| - 0.11 13.1 0.0 0.34 11.5 0.0 1.7 2 0 0 2 2 2 0 ACT domain DUF3951 PF13131.6 gi|452208977|ref|YP_007489091.1| - 2.8 8.2 6.0 0.27 11.5 1.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3951) AAA_3 PF07726.11 gi|452208978|ref|YP_007489092.1| - 7.4e-63 210.2 0.1 1.2e-62 209.5 0.1 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_2 PF17863.1 gi|452208978|ref|YP_007489092.1| - 3.4e-19 68.5 0.0 5.4e-19 67.8 0.0 1.3 1 0 0 1 1 1 1 AAA lid domain AAA_5 PF07728.14 gi|452208978|ref|YP_007489092.1| - 7.3e-13 48.7 0.0 1.3e-12 47.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|452208978|ref|YP_007489092.1| - 1.1e-06 29.2 0.0 1.8e-06 28.4 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) MCM PF00493.23 gi|452208978|ref|YP_007489092.1| - 1.2e-05 24.5 0.0 2.4e-05 23.5 0.0 1.6 1 0 0 1 1 1 1 MCM P-loop domain RuvB_N PF05496.12 gi|452208978|ref|YP_007489092.1| - 0.00062 19.6 0.0 0.009 15.8 0.0 2.3 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain Sigma54_activat PF00158.26 gi|452208978|ref|YP_007489092.1| - 0.00092 18.9 0.0 0.0029 17.3 0.0 1.8 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_2 PF07724.14 gi|452208978|ref|YP_007489092.1| - 0.039 14.1 0.0 0.075 13.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) AAA_19 PF13245.6 gi|452208978|ref|YP_007489092.1| - 0.064 13.6 0.0 3.9 7.8 0.0 2.3 2 0 0 2 2 2 0 AAA domain DUF58 PF01882.18 gi|452208980|ref|YP_007489094.1| - 2.9e-24 85.1 0.1 8.9e-24 83.6 0.0 1.8 2 0 0 2 2 2 1 Protein of unknown function DUF58 VWA_2 PF13519.6 gi|452208980|ref|YP_007489094.1| - 2.6e-08 34.5 0.1 1.2e-07 32.3 0.0 2.0 1 1 1 2 2 2 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 gi|452208980|ref|YP_007489094.1| - 1.5e-05 24.5 0.0 2.8e-05 23.6 0.0 1.5 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein VWA PF00092.28 gi|452208980|ref|YP_007489094.1| - 0.00029 21.1 0.0 0.00058 20.2 0.0 1.6 1 0 0 1 1 1 1 von Willebrand factor type A domain PaaX PF07848.12 gi|452208980|ref|YP_007489094.1| - 0.022 15.0 0.0 0.043 14.1 0.0 1.4 1 0 0 1 1 1 0 PaaX-like protein DBD_HTH PF18430.1 gi|452208980|ref|YP_007489094.1| - 0.028 14.2 0.4 1.5 8.6 0.0 2.9 3 0 0 3 3 3 0 Putative DNA-binding domain BatA PF07584.11 gi|452208981|ref|YP_007489095.1| - 2.4e-14 53.4 6.4 2.4e-14 53.4 6.4 1.7 2 0 0 2 2 2 1 Aerotolerance regulator N-terminal DUF2194 PF09960.9 gi|452208981|ref|YP_007489095.1| - 0.00024 19.6 0.2 0.00043 18.8 0.0 1.3 2 0 0 2 2 2 1 Uncharacterised protein conserved in bacteria (DUF2194) VWA_2 PF13519.6 gi|452208981|ref|YP_007489095.1| - 0.001 19.7 0.2 0.0043 17.7 0.2 2.0 1 1 0 1 1 1 1 von Willebrand factor type A domain ThuA PF06283.11 gi|452208981|ref|YP_007489095.1| - 0.0038 17.5 0.0 0.008 16.4 0.0 1.4 1 0 0 1 1 1 1 Trehalose utilisation ABC_transp_aux PF09822.9 gi|452208981|ref|YP_007489095.1| - 0.0049 16.4 0.0 0.012 15.1 0.0 1.6 1 1 0 1 1 1 1 ABC-type uncharacterized transport system Glyco_hydro_42M PF08532.10 gi|452208981|ref|YP_007489095.1| - 0.14 11.7 0.0 0.33 10.4 0.0 1.6 1 0 0 1 1 1 0 Beta-galactosidase trimerisation domain VWA PF00092.28 gi|452208982|ref|YP_007489096.1| - 1.5e-10 41.6 4.2 4.6e-06 27.0 0.2 2.9 3 0 0 3 3 3 2 von Willebrand factor type A domain GATase1_like PF07090.11 gi|452208982|ref|YP_007489096.1| - 2e-10 40.6 0.0 0.00016 21.2 0.0 2.4 2 0 0 2 2 2 2 Putative glutamine amidotransferase DUF4350 PF14258.6 gi|452208982|ref|YP_007489096.1| - 0.003 17.9 0.6 0.92 10.0 0.0 3.3 2 1 0 2 2 2 1 Domain of unknown function (DUF4350) ABC_transp_aux PF09822.9 gi|452208982|ref|YP_007489096.1| - 0.02 14.4 0.6 0.068 12.6 0.3 2.0 2 0 0 2 2 2 0 ABC-type uncharacterized transport system LBP_M PF17385.2 gi|452208982|ref|YP_007489096.1| - 0.023 14.2 0.0 5.3 6.5 0.0 3.5 3 1 0 3 3 3 0 Lacto-N-biose phosphorylase central domain Usp PF00582.26 gi|452208982|ref|YP_007489096.1| - 0.031 14.8 0.0 0.42 11.1 0.0 2.5 2 0 0 2 2 2 0 Universal stress protein family Cytadhesin_P30 PF07271.11 gi|452208982|ref|YP_007489096.1| - 0.06 12.9 0.1 0.6 9.6 0.0 2.1 2 0 0 2 2 2 0 Cytadhesin P30/P32 DUF4159 PF13709.6 gi|452208982|ref|YP_007489096.1| - 0.078 12.4 0.0 0.32 10.4 0.0 2.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4159) LPG_synthase_TM PF03706.13 gi|452208984|ref|YP_007489098.1| - 5.3e-50 170.7 21.5 6e-50 170.5 21.5 1.0 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region NTP_transferase PF00483.23 gi|452208985|ref|YP_007489099.1| - 4.9e-49 167.1 0.0 6.6e-49 166.7 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 gi|452208985|ref|YP_007489099.1| - 4.4e-20 70.6 26.2 1.8e-08 33.8 1.5 5.2 2 2 3 5 5 5 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|452208985|ref|YP_007489099.1| - 1.1e-09 37.8 27.1 0.00067 19.3 8.6 4.6 2 2 2 4 4 4 4 Hexapeptide repeat of succinyl-transferase NTP_transf_3 PF12804.7 gi|452208985|ref|YP_007489099.1| - 7.9e-09 36.1 0.0 1.2e-08 35.5 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Fucokinase PF07959.12 gi|452208985|ref|YP_007489099.1| - 0.0057 15.6 2.1 0.019 13.9 0.3 2.0 1 1 1 2 2 2 1 L-fucokinase Bactofilin PF04519.13 gi|452208985|ref|YP_007489099.1| - 0.47 10.8 6.3 1 9.7 1.5 2.4 1 1 1 2 2 2 0 Polymer-forming cytoskeletal DUF4954 PF16314.5 gi|452208985|ref|YP_007489099.1| - 1.2 7.2 5.1 2.7 6.0 5.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4954) tRNA_anti-codon PF01336.25 gi|452208986|ref|YP_007489100.1| - 2.2e-07 30.8 0.0 3.1e-07 30.3 0.0 1.2 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain CsoSCA PF08936.10 gi|452208986|ref|YP_007489100.1| - 0.15 10.7 0.0 0.18 10.4 0.0 1.1 1 0 0 1 1 1 0 Carboxysome Shell Carbonic Anhydrase FKBP_C PF00254.28 gi|452208987|ref|YP_007489101.1| - 1.9e-22 79.4 0.0 2.8e-22 78.8 0.0 1.3 1 1 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase FKBP_C PF00254.28 gi|452208988|ref|YP_007489102.1| - 1.4e-27 95.8 0.4 2.3e-27 95.2 0.4 1.3 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase FKBP_C PF00254.28 gi|452208989|ref|YP_007489103.1| - 1.5e-28 98.9 0.8 2e-28 98.6 0.8 1.2 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase YajC PF02699.15 gi|452208989|ref|YP_007489103.1| - 0.13 12.2 0.3 0.25 11.2 0.3 1.5 1 0 0 1 1 1 0 Preprotein translocase subunit NosD PF05048.13 gi|452208991|ref|YP_007489105.1| - 2e-41 141.8 29.1 2e-41 141.8 29.1 3.4 2 2 0 2 2 2 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|452208991|ref|YP_007489105.1| - 1.8e-18 66.9 26.8 1.8e-18 66.9 26.8 2.9 2 0 0 2 2 2 1 Right handed beta helix region PKD PF00801.20 gi|452208991|ref|YP_007489105.1| - 4.4e-10 39.3 18.2 2.2e-06 27.4 2.4 3.3 4 0 0 4 4 4 2 PKD domain Pectinesterase PF01095.19 gi|452208991|ref|YP_007489105.1| - 0.0011 17.7 0.8 0.0022 16.7 0.2 1.8 2 0 0 2 2 2 1 Pectinesterase PKD_3 PF16820.5 gi|452208991|ref|YP_007489105.1| - 0.04 13.7 1.4 0.71 9.7 0.1 2.5 2 0 0 2 2 2 0 PKD-like domain SMC_ScpB PF04079.16 gi|452208992|ref|YP_007489106.1| - 0.002 17.8 0.0 0.0024 17.5 0.0 1.2 1 0 0 1 1 1 1 Segregation and condensation complex subunit ScpB PadR PF03551.14 gi|452208992|ref|YP_007489106.1| - 0.13 12.2 0.0 0.23 11.4 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family PadR PF03551.14 gi|452208994|ref|YP_007489108.1| - 0.015 15.2 0.1 0.024 14.6 0.1 1.5 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family P2_Phage_GpR PF06891.11 gi|452208994|ref|YP_007489108.1| - 0.043 13.9 0.0 0.048 13.7 0.0 1.3 1 1 0 1 1 1 0 P2 phage tail completion protein R (GpR) Pyr_redox_2 PF07992.14 gi|452208995|ref|YP_007489109.1| - 1.1e-15 57.6 0.0 2.7e-08 33.4 0.0 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FlpD PF02662.16 gi|452208995|ref|YP_007489109.1| - 3.6e-14 52.8 0.7 1.5e-12 47.6 0.0 3.6 4 1 1 5 5 4 1 Methyl-viologen-reducing hydrogenase, delta subunit Fer4 PF00037.27 gi|452208995|ref|YP_007489109.1| - 1.6e-12 46.7 34.9 0.00029 20.5 3.9 5.7 5 1 0 5 5 5 4 4Fe-4S binding domain Fer4_2 PF12797.7 gi|452208995|ref|YP_007489109.1| - 6.1e-12 44.9 29.0 0.00093 19.2 3.5 5.0 4 0 0 4 4 4 4 4Fe-4S binding domain DAO PF01266.24 gi|452208995|ref|YP_007489109.1| - 9.2e-10 38.6 0.0 8e-07 29.0 0.0 2.5 2 0 0 2 2 2 2 FAD dependent oxidoreductase Fer4_7 PF12838.7 gi|452208995|ref|YP_007489109.1| - 1.1e-09 38.7 33.9 8.4e-06 26.3 10.3 5.2 3 2 2 5 5 5 4 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|452208995|ref|YP_007489109.1| - 1.3e-09 37.7 38.1 0.00019 21.4 1.3 5.2 5 0 0 5 5 4 4 4Fe-4S binding domain Fer4_10 PF13237.6 gi|452208995|ref|YP_007489109.1| - 6.8e-09 35.7 31.0 3e-05 24.0 6.0 4.3 4 1 1 5 5 4 3 4Fe-4S dicluster domain FAD_oxidored PF12831.7 gi|452208995|ref|YP_007489109.1| - 1.5e-08 34.4 0.0 2.2e-08 33.9 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|452208995|ref|YP_007489109.1| - 5.2e-07 29.1 0.9 9.6e-07 28.2 0.9 1.4 1 0 0 1 1 1 1 FAD binding domain Fer4_16 PF13484.6 gi|452208995|ref|YP_007489109.1| - 6.8e-07 30.1 24.0 0.034 15.1 0.1 5.1 5 0 0 5 5 4 3 4Fe-4S double cluster binding domain NAD_binding_8 PF13450.6 gi|452208995|ref|YP_007489109.1| - 4.1e-06 26.9 0.1 1e-05 25.7 0.1 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain GIDA PF01134.22 gi|452208995|ref|YP_007489109.1| - 1.3e-05 24.5 0.1 2.4e-05 23.6 0.1 1.5 1 0 0 1 1 1 1 Glucose inhibited division protein A Fer4_9 PF13187.6 gi|452208995|ref|YP_007489109.1| - 2.1e-05 24.6 6.2 2.1e-05 24.6 6.2 4.4 4 2 3 7 7 4 4 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|452208995|ref|YP_007489109.1| - 2.7e-05 24.2 36.8 0.0088 16.2 5.4 4.4 4 1 0 4 4 3 3 4Fe-4S dicluster domain Thi4 PF01946.17 gi|452208995|ref|YP_007489109.1| - 8e-05 22.0 0.1 0.00015 21.1 0.1 1.4 1 0 0 1 1 1 1 Thi4 family FAD_binding_3 PF01494.19 gi|452208995|ref|YP_007489109.1| - 0.00032 20.1 0.5 0.00052 19.4 0.5 1.3 1 0 0 1 1 1 1 FAD binding domain Fer4_17 PF13534.6 gi|452208995|ref|YP_007489109.1| - 0.00066 20.2 30.5 0.036 14.6 2.9 5.4 5 2 0 5 5 4 3 4Fe-4S dicluster domain B12-binding PF02310.19 gi|452208995|ref|YP_007489109.1| - 0.0016 18.5 0.1 0.18 11.9 0.0 2.7 3 0 0 3 3 2 1 B12 binding domain HI0933_like PF03486.14 gi|452208995|ref|YP_007489109.1| - 0.0019 17.0 0.9 0.0035 16.1 0.9 1.4 1 0 0 1 1 1 1 HI0933-like protein Pyr_redox PF00070.27 gi|452208995|ref|YP_007489109.1| - 0.003 18.1 0.3 0.12 13.0 0.1 3.0 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|452208995|ref|YP_007489109.1| - 0.0046 16.3 0.3 0.06 12.6 0.2 2.5 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_22 PF17179.4 gi|452208995|ref|YP_007489109.1| - 0.024 15.5 16.5 0.57 11.1 0.9 4.7 4 0 0 4 4 4 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|452208995|ref|YP_007489109.1| - 0.024 15.1 2.4 0.024 15.1 2.4 5.1 3 3 3 6 6 3 0 4Fe-4S dicluster domain Amino_oxidase PF01593.24 gi|452208995|ref|YP_007489109.1| - 0.066 12.5 0.0 0.1 11.9 0.0 1.2 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase AlaDh_PNT_C PF01262.21 gi|452208995|ref|YP_007489109.1| - 0.092 12.0 0.1 0.23 10.8 0.1 1.6 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Fer4_18 PF13746.6 gi|452208995|ref|YP_007489109.1| - 1 9.6 19.6 0.15 12.3 0.8 3.7 3 1 0 3 3 2 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|452208996|ref|YP_007489110.1| - 6.6e-11 42.5 7.3 1.3e-10 41.6 7.3 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452208996|ref|YP_007489110.1| - 4.3e-08 33.2 8.1 8.5e-08 32.2 8.1 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|452208996|ref|YP_007489110.1| - 8.8e-08 32.2 5.8 1.9e-07 31.1 5.8 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|452208996|ref|YP_007489110.1| - 1.3e-07 32.0 8.9 2.9e-07 30.9 8.9 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|452208996|ref|YP_007489110.1| - 7.1e-07 29.7 8.6 1.4e-06 28.8 8.6 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|452208996|ref|YP_007489110.1| - 8.3e-05 22.8 2.0 8.3e-05 22.8 2.0 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_2 PF12797.7 gi|452208996|ref|YP_007489110.1| - 0.0021 18.1 3.6 0.0021 18.1 3.6 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_6 PF12837.7 gi|452208996|ref|YP_007489110.1| - 0.0027 17.7 3.3 0.0027 17.7 3.3 2.1 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_16 PF13484.6 gi|452208996|ref|YP_007489110.1| - 0.0054 17.6 11.7 0.0054 17.6 11.7 2.9 3 1 0 3 3 3 1 4Fe-4S double cluster binding domain Fer4 PF00037.27 gi|452208996|ref|YP_007489110.1| - 0.006 16.3 3.0 0.006 16.3 3.0 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_21 PF14697.6 gi|452208996|ref|YP_007489110.1| - 0.03 14.5 9.2 0.11 12.6 9.2 1.9 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|452208996|ref|YP_007489110.1| - 0.82 10.8 16.8 0.69 11.0 5.4 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|452208996|ref|YP_007489110.1| - 1.9 9.4 12.8 0.41 11.5 2.8 2.4 1 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|452208996|ref|YP_007489110.1| - 4.9 7.8 8.1 0.34 11.5 0.6 2.3 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Lactonase PF10282.9 gi|452208997|ref|YP_007489111.1| - 1e-16 61.1 7.1 3e-05 23.5 0.9 4.1 1 1 3 4 4 4 4 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.16 gi|452208997|ref|YP_007489111.1| - 1e-12 47.3 8.1 2.5e-06 26.3 1.1 3.1 1 1 1 3 3 3 3 Cytochrome D1 heme domain NHL PF01436.21 gi|452208997|ref|YP_007489111.1| - 9.9e-10 38.0 23.9 0.0074 16.3 0.3 8.1 8 0 0 8 8 8 3 NHL repeat SGL PF08450.12 gi|452208997|ref|YP_007489111.1| - 1.5e-08 34.5 11.8 0.00048 19.8 6.0 4.1 1 1 3 4 4 4 4 SMP-30/Gluconolactonase/LRE-like region PD40 PF07676.12 gi|452208997|ref|YP_007489111.1| - 1.4e-05 24.9 0.1 3.6 7.7 0.0 4.6 4 0 0 4 4 4 2 WD40-like Beta Propeller Repeat Arylesterase PF01731.20 gi|452208997|ref|YP_007489111.1| - 0.0004 20.5 4.3 0.71 10.1 0.1 4.7 3 3 2 5 5 5 1 Arylesterase SBP56 PF05694.11 gi|452208997|ref|YP_007489111.1| - 0.011 14.6 0.3 6 5.6 0.0 3.6 1 1 1 3 3 3 0 56kDa selenium binding protein (SBP56) DUF4915 PF16261.5 gi|452208997|ref|YP_007489111.1| - 0.027 13.7 0.1 3 7.0 0.0 3.3 2 1 1 3 3 3 0 Domain of unknown function (DUF4915) Arm-DNA-bind_3 PF13356.6 gi|452208997|ref|YP_007489111.1| - 0.036 14.4 0.1 28 5.2 0.0 3.5 2 1 0 2 2 2 0 Arm DNA-binding domain DUF1513 PF07433.11 gi|452208997|ref|YP_007489111.1| - 0.092 11.8 2.2 1.8 7.6 0.1 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF1513) PCC_BT PF18140.1 gi|452208997|ref|YP_007489111.1| - 0.53 10.6 9.1 5.8 7.3 0.3 3.3 1 1 1 3 3 3 0 Propionyl-coenzyme A carboxylase BT domain PQQ PF01011.21 gi|452208997|ref|YP_007489111.1| - 0.54 10.3 18.8 1.9 8.6 0.1 5.9 7 0 0 7 7 7 0 PQQ enzyme repeat LVIVD PF08309.11 gi|452208998|ref|YP_007489112.1| - 1.2e-249 805.5 122.8 1e-22 79.2 0.4 14.2 12 2 2 14 14 14 14 LVIVD repeat Beta_propel PF09826.9 gi|452208998|ref|YP_007489112.1| - 6.1e-16 58.3 13.1 0.0056 15.6 0.3 8.4 1 1 3 6 6 6 5 Beta propeller domain PKD PF00801.20 gi|452208998|ref|YP_007489112.1| - 1.1e-10 41.2 1.9 3.3e-10 39.7 1.7 1.9 2 0 0 2 2 2 1 PKD domain PQQ_3 PF13570.6 gi|452208998|ref|YP_007489112.1| - 9.5e-07 29.1 81.6 0.45 11.1 3.0 14.0 14 0 0 14 14 14 7 PQQ-like domain DUF4263 PF14082.6 gi|452208998|ref|YP_007489112.1| - 0.00034 20.9 0.0 44 4.3 0.0 6.5 2 2 5 7 7 7 0 Domain of unknown function (DUF4263) CPSF_A PF03178.15 gi|452208998|ref|YP_007489112.1| - 0.0024 17.2 2.2 0.83 8.9 0.0 4.3 4 1 1 5 5 5 1 CPSF A subunit region DUF1236 PF06823.12 gi|452208998|ref|YP_007489112.1| - 0.26 11.2 21.3 2.3 8.1 0.1 6.9 8 0 0 8 8 8 0 Protein of unknown function (DUF1236) UPF0228 PF05727.11 gi|452208999|ref|YP_007489113.1| - 6.7e-36 122.8 9.4 2.1e-33 114.8 6.3 2.9 1 1 1 2 2 2 2 Uncharacterised protein family (UPF0228) Peptidase_C39_2 PF13529.6 gi|452209000|ref|YP_007489114.1| - 1.8e-06 28.6 0.9 1.8e-06 28.6 0.9 2.5 3 1 0 3 3 3 1 Peptidase_C39 like family Peptidase_C70 PF12385.8 gi|452209000|ref|YP_007489114.1| - 0.021 14.8 0.0 0.039 13.9 0.0 1.4 1 0 0 1 1 1 0 Papain-like cysteine protease AvrRpt2 Lactonase PF10282.9 gi|452209001|ref|YP_007489115.1| - 4.3e-17 62.4 10.5 6.4e-08 32.2 0.3 3.2 1 1 2 3 3 3 3 Lactonase, 7-bladed beta-propeller SGL PF08450.12 gi|452209001|ref|YP_007489115.1| - 3.1e-10 40.1 14.5 0.00017 21.2 2.1 3.2 1 1 1 3 3 3 3 SMP-30/Gluconolactonase/LRE-like region NHL PF01436.21 gi|452209001|ref|YP_007489115.1| - 5.1e-09 35.7 18.2 0.054 13.6 0.4 7.1 8 0 0 8 8 8 4 NHL repeat Cytochrom_D1 PF02239.16 gi|452209001|ref|YP_007489115.1| - 7.3e-09 34.6 5.0 7.5e-07 28.0 3.7 2.7 1 1 1 2 2 2 2 Cytochrome D1 heme domain Arylesterase PF01731.20 gi|452209001|ref|YP_007489115.1| - 5.1e-05 23.4 4.6 0.071 13.3 0.1 4.2 2 1 2 4 4 4 2 Arylesterase Ldl_recept_b PF00058.17 gi|452209001|ref|YP_007489115.1| - 0.021 15.3 0.5 0.17 12.4 0.1 2.8 3 0 0 3 3 3 0 Low-density lipoprotein receptor repeat class B PCC_BT PF18140.1 gi|452209001|ref|YP_007489115.1| - 0.022 15.1 9.1 2.7 8.4 4.2 3.2 1 1 2 3 3 3 0 Propionyl-coenzyme A carboxylase BT domain Str_synth PF03088.16 gi|452209001|ref|YP_007489115.1| - 0.024 14.7 0.2 13 6.0 0.0 3.5 3 1 0 3 3 3 0 Strictosidine synthase P_proprotein PF01483.20 gi|452209001|ref|YP_007489115.1| - 0.11 12.5 0.9 31 4.7 0.0 4.0 3 1 2 5 5 5 0 Proprotein convertase P-domain Arm-DNA-bind_3 PF13356.6 gi|452209001|ref|YP_007489115.1| - 0.11 12.8 0.0 22 5.5 0.0 4.2 1 1 0 1 1 1 0 Arm DNA-binding domain Svf1 PF08622.10 gi|452209001|ref|YP_007489115.1| - 0.27 11.3 3.1 18 5.3 0.1 3.2 1 1 2 3 3 3 0 Svf1-like N-terminal lipocalin domain Me-amine-dh_H PF06433.11 gi|452209001|ref|YP_007489115.1| - 1.1 8.1 10.2 2.3 7.0 0.1 3.9 1 1 3 4 4 4 0 Methylamine dehydrogenase heavy chain (MADH) Peptidase_C39_2 PF13529.6 gi|452209002|ref|YP_007489116.1| - 6.8e-08 33.2 2.8 1.4e-07 32.2 0.2 2.7 2 2 1 3 3 3 1 Peptidase_C39 like family Peptidase_C70 PF12385.8 gi|452209002|ref|YP_007489116.1| - 0.0001 22.3 0.0 0.00027 20.9 0.0 1.7 1 0 0 1 1 1 1 Papain-like cysteine protease AvrRpt2 CCG PF02754.16 gi|452209003|ref|YP_007489117.1| - 9.7e-05 22.5 0.1 0.00017 21.7 0.0 1.4 2 0 0 2 2 2 1 Cysteine-rich domain DUF2274 PF10038.9 gi|452209003|ref|YP_007489117.1| - 0.065 13.7 0.0 0.084 13.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2274) UPF0228 PF05727.11 gi|452209004|ref|YP_007489118.1| - 5.5e-18 65.0 0.3 5.8e-18 64.9 0.3 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0228) UPF0228 PF05727.11 gi|452209006|ref|YP_007489120.1| - 5.8e-20 71.4 10.7 1.4e-10 41.0 2.6 2.9 1 1 2 3 3 3 2 Uncharacterised protein family (UPF0228) tRNA_anti-like PF12869.7 gi|452209006|ref|YP_007489120.1| - 0.036 13.7 1.6 0.8 9.3 0.2 2.3 2 1 0 2 2 2 0 tRNA_anti-like ETRAMP PF09716.10 gi|452209006|ref|YP_007489120.1| - 0.059 13.4 0.9 0.11 12.6 0.9 1.6 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Peptidase_C39_2 PF13529.6 gi|452209007|ref|YP_007489121.1| - 1.2e-07 32.4 2.6 2e-07 31.6 0.7 2.4 2 0 0 2 2 2 1 Peptidase_C39 like family Peptidase_C70 PF12385.8 gi|452209007|ref|YP_007489121.1| - 0.0019 18.2 0.0 0.0043 17.0 0.0 1.5 1 0 0 1 1 1 1 Papain-like cysteine protease AvrRpt2 MtrB PF05440.12 gi|452209009|ref|YP_007489123.1| - 0.12 12.8 0.0 0.13 12.7 0.0 1.2 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase subunit B RPN1_C PF18051.1 gi|452209009|ref|YP_007489123.1| - 0.15 12.1 0.0 0.31 11.1 0.0 1.6 2 0 0 2 2 2 0 26S proteasome non-ATPase regulatory subunit RPN1 C-terminal Lactonase PF10282.9 gi|452209011|ref|YP_007489125.1| - 3e-20 72.8 4.7 1.5e-07 31.0 0.2 3.5 1 1 2 3 3 3 3 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.16 gi|452209011|ref|YP_007489125.1| - 3.5e-11 42.3 7.3 0.00041 19.0 0.2 4.0 1 1 3 4 4 4 3 Cytochrome D1 heme domain SGL PF08450.12 gi|452209011|ref|YP_007489125.1| - 8.7e-08 32.0 10.7 0.0037 16.9 0.8 3.8 1 1 1 3 3 3 3 SMP-30/Gluconolactonase/LRE-like region NHL PF01436.21 gi|452209011|ref|YP_007489125.1| - 8.9e-07 28.7 16.6 0.71 10.0 0.0 7.8 9 0 0 9 9 8 2 NHL repeat PD40 PF07676.12 gi|452209011|ref|YP_007489125.1| - 1e-06 28.5 0.0 2.2 8.3 0.0 4.8 5 0 0 5 5 4 1 WD40-like Beta Propeller Repeat Arylesterase PF01731.20 gi|452209011|ref|YP_007489125.1| - 6.4e-06 26.3 14.4 0.13 12.5 0.1 6.8 3 2 4 8 8 8 2 Arylesterase Thioredox_DsbH PF03190.15 gi|452209011|ref|YP_007489125.1| - 0.00035 20.6 0.1 5.5 6.9 0.0 3.7 3 0 0 3 3 3 2 Protein of unknown function, DUF255 DUF1513 PF07433.11 gi|452209011|ref|YP_007489125.1| - 0.0059 15.7 1.6 0.027 13.5 0.1 2.4 2 1 0 2 2 2 1 Protein of unknown function (DUF1513) HIRA_B PF09453.10 gi|452209011|ref|YP_007489125.1| - 0.0083 15.9 1.7 9 6.3 0.0 3.8 4 0 0 4 4 4 1 HIRA B motif Arm-DNA-bind_3 PF13356.6 gi|452209011|ref|YP_007489125.1| - 0.01 16.2 0.0 21 5.6 0.0 4.5 2 1 1 3 3 3 0 Arm DNA-binding domain PBCV_basic_adap PF08789.10 gi|452209011|ref|YP_007489125.1| - 0.081 13.1 9.8 18 5.5 0.0 5.5 6 0 0 6 6 6 0 PBCV-specific basic adaptor domain Kelch_6 PF13964.6 gi|452209011|ref|YP_007489125.1| - 0.1 12.9 4.3 4.1 7.8 0.0 4.7 6 0 0 6 6 5 0 Kelch motif SspH PF08141.12 gi|452209011|ref|YP_007489125.1| - 0.25 11.5 0.2 0.25 11.5 0.2 4.5 4 1 1 5 5 5 0 Small acid-soluble spore protein H family PapD_N PF00345.20 gi|452209011|ref|YP_007489125.1| - 3.5 7.5 5.2 1.1 9.2 0.2 2.6 3 0 0 3 3 3 0 Pili and flagellar-assembly chaperone, PapD N-terminal domain CDC37_C PF08564.10 gi|452209013|ref|YP_007489127.1| - 0.1 12.7 0.0 0.11 12.7 0.0 1.1 1 0 0 1 1 1 0 Cdc37 C terminal domain Aconitase PF00330.20 gi|452209014|ref|YP_007489128.1| - 5.8e-100 335.5 1.9 7.5e-98 328.5 1.9 2.2 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) DUF521 PF04412.13 gi|452209014|ref|YP_007489128.1| - 0.034 12.9 0.0 0.052 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF521) SEO_C PF14577.6 gi|452209016|ref|YP_007489130.1| - 0.021 14.2 0.1 0.023 14.2 0.1 1.0 1 0 0 1 1 1 0 Sieve element occlusion C-terminus T2SSF PF00482.23 gi|452209018|ref|YP_007489132.1| - 1e-06 28.7 10.6 5.2e-05 23.2 0.1 3.5 4 0 0 4 4 4 2 Type II secretion system (T2SS), protein F AgrB PF04647.15 gi|452209018|ref|YP_007489132.1| - 0.00022 20.6 7.5 0.00022 20.6 7.5 2.4 3 0 0 3 3 3 1 Accessory gene regulator B MscS_TM PF12794.7 gi|452209018|ref|YP_007489132.1| - 0.0013 17.7 1.8 0.0013 17.7 1.8 1.7 2 0 0 2 2 2 1 Mechanosensitive ion channel inner membrane domain 1 TNFR_16_TM PF18422.1 gi|452209018|ref|YP_007489132.1| - 0.19 11.7 7.1 0.71 9.9 0.7 2.9 2 0 0 2 2 2 0 Tumor necrosis factor receptor member 16 trans-membrane domain Ac76 PF05814.11 gi|452209018|ref|YP_007489132.1| - 0.91 9.6 10.3 0.033 14.2 3.8 2.0 2 0 0 2 2 2 0 Orf76 (Ac76) Cytochrom_C_asm PF01578.20 gi|452209018|ref|YP_007489132.1| - 1.2 8.9 8.9 0.068 12.9 2.0 2.4 2 1 0 2 2 2 0 Cytochrome C assembly protein T2SSE PF00437.20 gi|452209019|ref|YP_007489133.1| - 3e-45 154.4 0.0 4.4e-45 153.9 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.6 gi|452209019|ref|YP_007489133.1| - 5e-05 23.0 0.0 0.00012 21.7 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_tran PF00005.27 gi|452209019|ref|YP_007489133.1| - 0.0031 18.0 0.0 0.013 16.1 0.0 2.1 2 0 0 2 2 2 1 ABC transporter AAA_7 PF12775.7 gi|452209019|ref|YP_007489133.1| - 0.027 14.0 0.0 0.085 12.4 0.1 1.7 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_16 PF13191.6 gi|452209019|ref|YP_007489133.1| - 0.034 14.5 0.0 0.073 13.4 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain AAA_23 PF13476.6 gi|452209019|ref|YP_007489133.1| - 0.071 13.6 7.1 0.22 12.0 0.0 2.5 2 0 0 2 2 2 0 AAA domain DLIC PF05783.11 gi|452209019|ref|YP_007489133.1| - 0.092 11.6 1.7 4.6 6.0 1.2 2.2 2 0 0 2 2 2 0 Dynein light intermediate chain (DLIC) ATPase PF06745.13 gi|452209020|ref|YP_007489134.1| - 2.4e-21 76.2 0.0 2.8e-21 75.9 0.0 1.1 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.6 gi|452209020|ref|YP_007489134.1| - 7.6e-07 28.9 0.0 1.2e-06 28.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain Rad51 PF08423.11 gi|452209020|ref|YP_007489134.1| - 5.5e-05 22.5 0.1 8.2e-05 22.0 0.1 1.2 1 0 0 1 1 1 1 Rad51 RecA PF00154.21 gi|452209020|ref|YP_007489134.1| - 0.00042 19.9 0.0 0.00078 19.0 0.0 1.4 1 0 0 1 1 1 1 recA bacterial DNA recombination protein PAXNEB PF05625.11 gi|452209020|ref|YP_007489134.1| - 0.0023 17.1 0.4 0.0082 15.3 0.1 1.8 2 0 0 2 2 2 1 PAXNEB protein DnaB_C PF03796.15 gi|452209020|ref|YP_007489134.1| - 0.0058 16.0 0.0 0.011 15.1 0.0 1.5 1 1 0 1 1 1 1 DnaB-like helicase C terminal domain AAA_14 PF13173.6 gi|452209020|ref|YP_007489134.1| - 0.0079 16.2 0.1 0.081 13.0 0.0 2.2 1 1 1 2 2 2 1 AAA domain ATPase_2 PF01637.18 gi|452209020|ref|YP_007489134.1| - 0.019 14.9 0.0 0.028 14.4 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea DAP3 PF10236.9 gi|452209020|ref|YP_007489134.1| - 0.037 13.2 0.0 0.063 12.4 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 AAA_35 PF14516.6 gi|452209020|ref|YP_007489134.1| - 0.053 12.4 0.0 0.088 11.6 0.0 1.3 1 0 0 1 1 1 0 AAA-like domain Elong_Iki1 PF10483.9 gi|452209020|ref|YP_007489134.1| - 0.16 11.5 0.0 0.2 11.1 0.0 1.2 1 0 0 1 1 1 0 Elongator subunit Iki1 FtsK_SpoIIIE PF01580.18 gi|452209020|ref|YP_007489134.1| - 0.19 11.0 0.0 0.43 9.9 0.0 1.6 1 0 0 1 1 1 0 FtsK/SpoIIIE family NPP PF08384.10 gi|452209020|ref|YP_007489134.1| - 1.8 8.7 6.0 6.4 6.9 0.4 3.2 3 0 0 3 3 3 0 Pro-opiomelanocortin, N-terminal region Arch_fla_DE PF04659.13 gi|452209023|ref|YP_007489137.1| - 0.0011 18.7 0.1 0.0086 15.9 0.0 2.2 1 1 1 2 2 2 1 Archaeal flagella protein LMBR1 PF04791.16 gi|452209023|ref|YP_007489137.1| - 0.36 9.7 0.7 0.5 9.2 0.7 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein TPP_enzyme_C PF02775.21 gi|452209024|ref|YP_007489138.1| - 4e-29 101.4 0.0 6.1e-29 100.8 0.0 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFO_beta_C PF12367.8 gi|452209024|ref|YP_007489138.1| - 3.1e-28 97.7 2.2 3.4e-28 97.6 1.2 1.6 2 0 0 2 2 2 1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal POR_N PF01855.19 gi|452209025|ref|YP_007489139.1| - 8.9e-55 185.9 0.0 1.3e-54 185.4 0.0 1.2 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg POR PF01558.18 gi|452209025|ref|YP_007489139.1| - 9.2e-40 136.6 0.0 1.7e-39 135.7 0.0 1.4 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase PFOR_II PF17147.4 gi|452209025|ref|YP_007489139.1| - 2.6e-06 27.7 0.0 6e-06 26.5 0.0 1.7 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II DUF2812 PF11193.8 gi|452209025|ref|YP_007489139.1| - 0.041 14.1 0.1 0.27 11.5 0.0 2.3 3 0 0 3 3 3 0 Protein of unknown function (DUF2812) MtN3_slv PF03083.16 gi|452209026|ref|YP_007489140.1| - 0.027 14.5 2.5 0.03 14.4 2.5 1.1 1 0 0 1 1 1 0 Sugar efflux transporter for intercellular exchange OrfB_Zn_ribbon PF07282.11 gi|452209028|ref|YP_007489142.1| - 5.8e-24 83.8 0.3 1.2e-23 82.8 0.3 1.6 1 0 0 1 1 1 1 Putative transposase DNA-binding domain OrfB_IS605 PF01385.19 gi|452209028|ref|YP_007489142.1| - 2.1e-16 60.2 3.6 7.2e-13 48.8 0.8 2.6 2 1 1 3 3 3 2 Probable transposase zf-piccolo PF05715.13 gi|452209028|ref|YP_007489142.1| - 0.0029 17.7 1.0 0.0056 16.8 1.0 1.4 1 0 0 1 1 1 1 Piccolo Zn-finger DZR PF12773.7 gi|452209028|ref|YP_007489142.1| - 0.047 13.7 0.6 0.085 12.9 0.6 1.4 1 0 0 1 1 1 0 Double zinc ribbon A2L_zn_ribbon PF08792.10 gi|452209028|ref|YP_007489142.1| - 0.049 13.4 1.6 0.1 12.3 1.6 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain HypA PF01155.19 gi|452209028|ref|YP_007489142.1| - 0.15 12.1 1.5 0.24 11.4 0.8 1.8 2 1 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn-ribbon_8 PF09723.10 gi|452209028|ref|YP_007489142.1| - 0.26 11.4 0.9 0.51 10.5 0.9 1.5 1 0 0 1 1 1 0 Zinc ribbon domain Rubredoxin PF00301.20 gi|452209028|ref|YP_007489142.1| - 0.54 10.3 3.4 1.5 8.9 0.6 2.3 2 0 0 2 2 2 0 Rubredoxin zf-RanBP PF00641.18 gi|452209028|ref|YP_007489142.1| - 0.86 9.0 6.8 6.3 6.2 0.2 2.4 1 1 1 2 2 2 0 Zn-finger in Ran binding protein and others Y1_Tnp PF01797.16 gi|452209029|ref|YP_007489143.1| - 1.1e-33 115.9 2.0 1.2e-33 115.7 2.0 1.0 1 0 0 1 1 1 1 Transposase IS200 like DUF1699 PF08004.11 gi|452209030|ref|YP_007489144.1| - 7.9e-41 138.8 0.6 8.7e-41 138.6 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) Nicastrin PF05450.15 gi|452209030|ref|YP_007489144.1| - 0.043 13.3 0.1 0.048 13.1 0.1 1.0 1 0 0 1 1 1 0 Nicastrin Metalloenzyme PF01676.18 gi|452209030|ref|YP_007489144.1| - 0.2 11.0 0.0 0.23 10.8 0.0 1.1 1 0 0 1 1 1 0 Metalloenzyme superfamily Histidinol_dh PF00815.20 gi|452209031|ref|YP_007489145.1| - 1.4e-169 564.5 4.3 1.6e-169 564.2 4.3 1.0 1 0 0 1 1 1 1 Histidinol dehydrogenase CEP1-DNA_bind PF09287.10 gi|452209033|ref|YP_007489147.1| - 0.017 14.8 0.2 0.017 14.8 0.2 1.0 1 0 0 1 1 1 0 CEP-1, DNA binding Rab5ip PF07019.12 gi|452209034|ref|YP_007489148.1| - 0.083 13.5 5.4 0.13 12.8 5.4 1.3 1 0 0 1 1 1 0 Rab5-interacting protein (Rab5ip) DUF2964 PF11177.8 gi|452209034|ref|YP_007489148.1| - 0.46 10.7 2.2 1.3 9.2 2.2 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2964) Lactamase_B_2 PF12706.7 gi|452209035|ref|YP_007489149.1| - 2.4e-06 27.2 0.7 1.2e-05 24.9 0.2 2.0 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|452209035|ref|YP_007489149.1| - 0.012 15.5 0.2 0.1 12.5 0.1 2.2 2 1 0 2 2 2 0 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|452209035|ref|YP_007489149.1| - 0.28 11.1 5.7 3.4 7.6 5.7 2.3 1 1 0 1 1 1 0 Metallo-beta-lactamase superfamily N6_Mtase PF02384.16 gi|452209036|ref|YP_007489150.1| - 1.4e-81 274.2 0.1 1.8e-81 273.8 0.1 1.2 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.8 gi|452209036|ref|YP_007489150.1| - 1.3e-15 58.3 0.6 2.5e-15 57.3 0.6 1.5 1 0 0 1 1 1 1 HsdM N-terminal domain MTS PF05175.14 gi|452209036|ref|YP_007489150.1| - 0.06 12.9 0.0 0.12 11.9 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase small domain TetR_N PF00440.23 gi|452209037|ref|YP_007489151.1| - 0.05 13.4 0.0 0.12 12.2 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family TetR_C_5 PF08360.11 gi|452209037|ref|YP_007489151.1| - 0.14 12.4 0.0 0.2 11.9 0.0 1.4 1 1 0 1 1 1 0 QacR-like protein, C-terminal region TetR_C_27 PF17935.1 gi|452209037|ref|YP_007489151.1| - 0.18 11.9 0.0 2.2 8.4 0.0 2.1 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain DUF1638 PF07796.11 gi|452209038|ref|YP_007489152.1| - 8.5e-34 117.0 0.0 1.2e-33 116.4 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1638) DUF1638 PF07796.11 gi|452209039|ref|YP_007489153.1| - 2.3e-25 89.6 0.0 2.6e-25 89.4 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1638) Curlin_rpt PF07012.12 gi|452209039|ref|YP_007489153.1| - 0.16 12.0 1.7 0.28 11.2 1.7 1.3 1 0 0 1 1 1 0 Curlin associated repeat DUF1699 PF08004.11 gi|452209040|ref|YP_007489154.1| - 4.5e-25 87.8 0.5 5e-25 87.7 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) PIN_9 PF18477.1 gi|452209040|ref|YP_007489154.1| - 0.095 13.0 0.0 0.1 12.9 0.0 1.1 1 0 0 1 1 1 0 PIN like domain Thioredoxin PF00085.20 gi|452209041|ref|YP_007489155.1| - 4.1e-13 49.2 0.1 4.3e-13 49.1 0.1 1.0 1 0 0 1 1 1 1 Thioredoxin KaiB PF07689.12 gi|452209041|ref|YP_007489155.1| - 3.9e-06 26.5 0.0 4.2e-06 26.4 0.0 1.1 1 0 0 1 1 1 1 KaiB domain Thioredoxin_3 PF13192.6 gi|452209041|ref|YP_007489155.1| - 2.6e-05 24.2 0.1 2.7e-05 24.1 0.1 1.1 1 0 0 1 1 1 1 Thioredoxin domain Thioredoxin_2 PF13098.6 gi|452209041|ref|YP_007489155.1| - 8.6e-05 23.0 0.0 9.1e-05 22.9 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin-like domain HyaE PF07449.11 gi|452209041|ref|YP_007489155.1| - 0.00021 21.2 0.0 0.00028 20.8 0.0 1.2 1 1 0 1 1 1 1 Hydrogenase-1 expression protein HyaE TraF PF13728.6 gi|452209041|ref|YP_007489155.1| - 0.00061 19.7 0.0 0.00072 19.5 0.0 1.0 1 0 0 1 1 1 1 F plasmid transfer operon protein ABC_transp_aux PF09822.9 gi|452209041|ref|YP_007489155.1| - 0.00064 19.3 0.0 0.00071 19.1 0.0 1.0 1 0 0 1 1 1 1 ABC-type uncharacterized transport system Glutaredoxin PF00462.24 gi|452209041|ref|YP_007489155.1| - 0.0031 17.7 0.1 0.0046 17.2 0.1 1.4 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin_6 PF13848.6 gi|452209041|ref|YP_007489155.1| - 0.0037 17.2 0.0 0.004 17.1 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin-like domain DUF836 PF05768.14 gi|452209041|ref|YP_007489155.1| - 0.0042 17.5 0.1 0.0052 17.2 0.1 1.1 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) Thioredoxin_9 PF14595.6 gi|452209041|ref|YP_007489155.1| - 0.008 15.9 0.0 0.0096 15.7 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin OST3_OST6 PF04756.13 gi|452209041|ref|YP_007489155.1| - 0.0084 15.5 0.0 0.0084 15.5 0.0 1.0 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_8 PF13905.6 gi|452209041|ref|YP_007489155.1| - 0.0088 16.3 0.1 0.019 15.3 0.1 1.6 1 1 0 1 1 1 1 Thioredoxin-like DSBA PF01323.20 gi|452209041|ref|YP_007489155.1| - 0.035 13.9 0.0 0.035 13.9 0.0 1.2 1 0 0 1 1 1 0 DSBA-like thioredoxin domain F420_ligase PF01996.16 gi|452209042|ref|YP_007489156.1| - 6.9e-55 186.1 0.0 8e-55 185.8 0.0 1.0 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase MTHFR PF02219.17 gi|452209044|ref|YP_007489158.1| - 1.8e-37 129.2 0.0 2.1e-37 129.0 0.0 1.0 1 0 0 1 1 1 1 Methylenetetrahydrofolate reductase MTHFR_C PF12225.8 gi|452209045|ref|YP_007489159.1| - 3.5e-31 106.7 1.4 3.5e-31 106.7 1.4 1.8 2 1 1 3 3 3 1 Methylene-tetrahydrofolate reductase C terminal DUF707 PF05212.12 gi|452209045|ref|YP_007489159.1| - 0.058 12.6 0.0 0.08 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF707) PrmA PF06325.13 gi|452209045|ref|YP_007489159.1| - 0.21 11.0 0.1 0.29 10.5 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) THF_DHG_CYH_C PF02882.19 gi|452209046|ref|YP_007489160.1| - 7.8e-65 217.1 2.6 1e-64 216.7 2.6 1.1 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THF_DHG_CYH PF00763.23 gi|452209046|ref|YP_007489160.1| - 3.3e-39 133.7 0.0 4.6e-39 133.3 0.0 1.2 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AdoHcyase_NAD PF00670.21 gi|452209046|ref|YP_007489160.1| - 0.042 13.9 1.1 2.2 8.3 1.0 2.3 1 1 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain SHMT PF00464.19 gi|452209047|ref|YP_007489161.1| - 4.8e-177 588.5 0.2 5.6e-177 588.3 0.2 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Aminotran_1_2 PF00155.21 gi|452209047|ref|YP_007489161.1| - 1.2e-09 37.9 0.0 1.7e-09 37.4 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 gi|452209047|ref|YP_007489161.1| - 6.4e-06 25.7 0.0 1.3e-05 24.6 0.0 1.4 1 1 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 gi|452209047|ref|YP_007489161.1| - 0.0087 15.4 0.0 0.012 15.0 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family OKR_DC_1 PF01276.20 gi|452209047|ref|YP_007489161.1| - 0.014 14.2 0.0 0.03 13.1 0.0 1.5 1 1 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain Formyl_trans_N PF00551.19 gi|452209048|ref|YP_007489162.1| - 5e-59 199.1 0.0 5.7e-59 198.9 0.0 1.0 1 0 0 1 1 1 1 Formyl transferase HTH_3 PF01381.22 gi|452209049|ref|YP_007489163.1| - 2.2e-08 34.0 0.1 6.9e-08 32.4 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix HTH_19 PF12844.7 gi|452209049|ref|YP_007489163.1| - 1.4e-06 28.2 0.1 1.6e-05 24.8 0.0 2.7 3 0 0 3 3 3 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|452209049|ref|YP_007489163.1| - 0.00013 22.2 0.0 0.00024 21.4 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain MerR PF00376.23 gi|452209049|ref|YP_007489163.1| - 0.0042 16.8 0.1 0.013 15.3 0.1 1.9 1 0 0 1 1 1 1 MerR family regulatory protein HTH_11 PF08279.12 gi|452209049|ref|YP_007489163.1| - 0.0059 16.5 0.3 0.024 14.6 0.1 2.1 2 0 0 2 2 2 1 HTH domain MerR_1 PF13411.6 gi|452209049|ref|YP_007489163.1| - 0.033 14.3 0.0 0.078 13.1 0.0 1.6 1 0 0 1 1 1 0 MerR HTH family regulatory protein NAD_synthase PF02540.17 gi|452209050|ref|YP_007489164.1| - 8.7e-86 287.0 0.0 1e-85 286.8 0.0 1.0 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.16 gi|452209050|ref|YP_007489164.1| - 5.2e-05 22.2 0.0 0.00013 20.9 0.0 1.6 2 0 0 2 2 2 1 tRNA methyl transferase Asn_synthase PF00733.21 gi|452209050|ref|YP_007489164.1| - 0.027 14.1 0.1 0.035 13.8 0.1 1.2 1 0 0 1 1 1 0 Asparagine synthase QueC PF06508.13 gi|452209050|ref|YP_007489164.1| - 0.032 13.7 0.0 0.095 12.2 0.0 1.7 2 0 0 2 2 2 0 Queuosine biosynthesis protein QueC AAA PF00004.29 gi|452209052|ref|YP_007489166.1| - 3.4e-97 322.0 0.0 2.4e-47 160.7 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|452209052|ref|YP_007489166.1| - 3e-32 110.2 0.7 3.8e-18 65.0 0.4 2.7 2 0 0 2 2 2 2 AAA+ lid domain CDC48_N PF02359.18 gi|452209052|ref|YP_007489166.1| - 5.4e-31 106.6 0.2 2.1e-30 104.7 0.2 2.1 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain CDC48_2 PF02933.17 gi|452209052|ref|YP_007489166.1| - 3e-16 58.9 0.3 4.6e-15 55.2 0.4 2.5 2 0 0 2 2 2 1 Cell division protein 48 (CDC48), domain 2 RuvB_N PF05496.12 gi|452209052|ref|YP_007489166.1| - 2e-15 56.9 0.0 1.1e-07 31.8 0.0 2.9 3 1 0 3 3 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 gi|452209052|ref|YP_007489166.1| - 5.3e-14 52.4 0.2 2.1e-05 24.6 0.0 3.4 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_2 PF07724.14 gi|452209052|ref|YP_007489166.1| - 5.7e-13 49.3 0.1 6.9e-05 23.0 0.0 3.1 2 1 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_16 PF13191.6 gi|452209052|ref|YP_007489166.1| - 6.9e-13 49.3 0.2 0.00016 22.1 0.0 3.8 2 2 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.6 gi|452209052|ref|YP_007489166.1| - 1.7e-11 44.5 1.0 0.0069 16.7 0.1 4.2 3 2 0 3 3 2 2 AAA domain AAA_14 PF13173.6 gi|452209052|ref|YP_007489166.1| - 1.2e-10 41.5 0.0 0.00014 21.9 0.0 2.5 2 0 0 2 2 2 2 AAA domain TIP49 PF06068.13 gi|452209052|ref|YP_007489166.1| - 1.8e-10 40.6 2.7 5.2e-06 25.9 0.0 3.1 3 1 1 4 4 3 2 TIP49 P-loop domain IstB_IS21 PF01695.17 gi|452209052|ref|YP_007489166.1| - 5.7e-09 36.0 0.0 0.0016 18.2 0.0 2.4 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_33 PF13671.6 gi|452209052|ref|YP_007489166.1| - 1.9e-08 34.6 0.0 0.0073 16.5 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.6 gi|452209052|ref|YP_007489166.1| - 4.4e-08 33.7 0.0 0.019 15.5 0.0 2.9 2 1 0 2 2 2 2 AAA domain AAA_25 PF13481.6 gi|452209052|ref|YP_007489166.1| - 5.6e-08 32.6 0.6 0.11 12.1 0.0 4.1 4 0 0 4 4 4 3 AAA domain AAA_7 PF12775.7 gi|452209052|ref|YP_007489166.1| - 2.7e-07 30.3 0.0 0.0073 15.8 0.0 2.8 3 0 0 3 3 2 2 P-loop containing dynein motor region Sigma54_activat PF00158.26 gi|452209052|ref|YP_007489166.1| - 5.4e-07 29.5 0.1 0.019 14.7 0.0 3.6 3 1 0 3 3 3 2 Sigma-54 interaction domain Mg_chelatase PF01078.21 gi|452209052|ref|YP_007489166.1| - 1.2e-06 28.1 0.3 0.035 13.5 0.0 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI RNA_helicase PF00910.22 gi|452209052|ref|YP_007489166.1| - 2.3e-06 27.9 0.0 0.094 13.1 0.0 2.6 2 0 0 2 2 2 2 RNA helicase ATPase PF06745.13 gi|452209052|ref|YP_007489166.1| - 4.5e-06 26.2 1.1 0.035 13.5 0.1 4.0 3 1 1 4 4 4 1 KaiC AAA_28 PF13521.6 gi|452209052|ref|YP_007489166.1| - 5e-06 26.8 0.0 0.1 12.9 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_24 PF13479.6 gi|452209052|ref|YP_007489166.1| - 8.1e-06 25.7 0.0 0.17 11.6 0.0 2.6 2 0 0 2 2 2 2 AAA domain Parvo_NS1 PF01057.17 gi|452209052|ref|YP_007489166.1| - 1.3e-05 24.4 0.1 0.12 11.5 0.0 2.3 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 Zeta_toxin PF06414.12 gi|452209052|ref|YP_007489166.1| - 1.7e-05 24.2 0.2 0.043 13.1 0.1 2.6 2 0 0 2 2 2 2 Zeta toxin PhoH PF02562.16 gi|452209052|ref|YP_007489166.1| - 3e-05 23.6 0.0 0.37 10.2 0.0 2.9 2 0 0 2 2 2 2 PhoH-like protein ABC_tran PF00005.27 gi|452209052|ref|YP_007489166.1| - 4.3e-05 24.0 0.1 0.37 11.3 0.0 3.0 3 0 0 3 3 2 2 ABC transporter TsaE PF02367.17 gi|452209052|ref|YP_007489166.1| - 5.7e-05 23.1 0.0 0.34 10.9 0.0 2.6 2 1 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_17 PF13207.6 gi|452209052|ref|YP_007489166.1| - 7.9e-05 23.1 0.3 0.41 11.1 0.0 3.6 4 0 0 4 4 2 1 AAA domain AAA_3 PF07726.11 gi|452209052|ref|YP_007489166.1| - 9.3e-05 22.3 0.0 0.76 9.6 0.0 3.0 2 1 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) DUF2075 PF09848.9 gi|452209052|ref|YP_007489166.1| - 0.00015 21.2 0.0 0.35 10.1 0.0 2.3 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) ATPase_2 PF01637.18 gi|452209052|ref|YP_007489166.1| - 0.00019 21.5 0.5 0.32 10.9 0.0 3.7 3 1 0 3 3 2 1 ATPase domain predominantly from Archaea Vps4_C PF09336.10 gi|452209052|ref|YP_007489166.1| - 0.00024 21.0 0.1 0.085 12.9 0.0 2.7 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain DUF815 PF05673.13 gi|452209052|ref|YP_007489166.1| - 0.00031 20.0 0.0 0.26 10.4 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF815) NB-ARC PF00931.22 gi|452209052|ref|YP_007489166.1| - 0.00043 19.6 0.0 0.95 8.6 0.0 2.6 2 0 0 2 2 2 2 NB-ARC domain AAA_11 PF13086.6 gi|452209052|ref|YP_007489166.1| - 0.00044 20.1 0.1 0.68 9.7 0.0 2.9 3 0 0 3 3 3 1 AAA domain AAA_19 PF13245.6 gi|452209052|ref|YP_007489166.1| - 0.001 19.4 2.6 1.9 8.8 0.0 3.5 3 1 1 4 4 3 2 AAA domain Bac_DnaA PF00308.18 gi|452209052|ref|YP_007489166.1| - 0.0025 17.7 0.0 1.2 9.0 0.0 2.5 2 0 0 2 2 2 1 Bacterial dnaA protein Rad17 PF03215.15 gi|452209052|ref|YP_007489166.1| - 0.003 17.5 0.1 0.81 9.6 0.0 3.1 2 1 1 3 3 3 1 Rad17 P-loop domain Cytidylate_kin2 PF13189.6 gi|452209052|ref|YP_007489166.1| - 0.003 17.7 0.0 0.27 11.3 0.0 2.5 2 0 0 2 2 2 1 Cytidylate kinase-like family Sigma54_activ_2 PF14532.6 gi|452209052|ref|YP_007489166.1| - 0.003 17.7 0.0 3.1 7.9 0.0 2.6 2 0 0 2 2 2 1 Sigma-54 interaction domain NACHT PF05729.12 gi|452209052|ref|YP_007489166.1| - 0.003 17.5 0.3 5.8 6.8 0.0 3.4 4 0 0 4 4 3 0 NACHT domain Guanylate_kin PF00625.21 gi|452209052|ref|YP_007489166.1| - 0.0031 17.2 0.2 5.9 6.5 0.0 4.0 2 2 2 4 4 4 0 Guanylate kinase ResIII PF04851.15 gi|452209052|ref|YP_007489166.1| - 0.0039 17.2 0.1 1.5 8.8 0.0 3.0 3 1 0 3 3 2 1 Type III restriction enzyme, res subunit TniB PF05621.11 gi|452209052|ref|YP_007489166.1| - 0.0043 16.5 0.2 8.2 5.8 0.0 3.5 4 0 0 4 4 4 0 Bacterial TniB protein IPT PF01745.16 gi|452209052|ref|YP_007489166.1| - 0.0047 16.4 0.1 1.4 8.3 0.0 2.7 2 0 0 2 2 2 1 Isopentenyl transferase NTPase_1 PF03266.15 gi|452209052|ref|YP_007489166.1| - 0.0082 16.1 1.5 8.2 6.3 0.0 3.6 2 1 1 3 3 3 0 NTPase AAA_30 PF13604.6 gi|452209052|ref|YP_007489166.1| - 0.011 15.5 5.4 0.81 9.4 0.3 3.1 3 1 0 3 3 2 0 AAA domain T2SSE PF00437.20 gi|452209052|ref|YP_007489166.1| - 0.013 14.5 0.0 0.54 9.3 0.0 2.4 2 0 0 2 2 2 0 Type II/IV secretion system protein ATP-synt_ab PF00006.25 gi|452209052|ref|YP_007489166.1| - 0.015 15.0 0.0 1.5 8.4 0.0 2.5 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain Cytidylate_kin PF02224.18 gi|452209052|ref|YP_007489166.1| - 0.019 14.7 0.3 4.8 6.9 0.0 2.4 2 0 0 2 2 2 0 Cytidylate kinase Viral_helicase1 PF01443.18 gi|452209052|ref|YP_007489166.1| - 0.022 14.5 0.0 0.16 11.7 0.0 2.2 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase Hydin_ADK PF17213.3 gi|452209052|ref|YP_007489166.1| - 0.074 13.3 1.4 3 8.1 0.1 2.4 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain SKI PF01202.22 gi|452209052|ref|YP_007489166.1| - 0.08 13.1 0.8 12 6.0 0.0 3.0 3 0 0 3 3 2 0 Shikimate kinase Zot PF05707.12 gi|452209052|ref|YP_007489166.1| - 0.15 11.7 0.0 4.3 6.9 0.0 2.7 2 1 0 2 2 2 0 Zonular occludens toxin (Zot) KAP_NTPase PF07693.14 gi|452209052|ref|YP_007489166.1| - 0.2 10.9 0.1 7.3 5.7 0.0 3.0 3 1 1 4 4 4 0 KAP family P-loop domain PRC PF05239.16 gi|452209053|ref|YP_007489167.1| - 1.4e-16 60.4 0.1 1.5e-16 60.3 0.1 1.0 1 0 0 1 1 1 1 PRC-barrel domain DUF2171 PF09939.9 gi|452209053|ref|YP_007489167.1| - 0.11 12.8 0.0 0.22 11.8 0.0 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2171) Methyltransf_25 PF13649.6 gi|452209054|ref|YP_007489168.1| - 9.9e-13 48.6 0.0 2e-12 47.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|452209054|ref|YP_007489168.1| - 2.7e-11 43.3 0.0 3.8e-11 42.8 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_11 PF08241.12 gi|452209054|ref|YP_007489168.1| - 3.1e-11 43.8 0.0 6.4e-11 42.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|452209054|ref|YP_007489168.1| - 1.5e-08 34.7 0.0 2.1e-08 34.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|452209054|ref|YP_007489168.1| - 1.2e-06 28.4 0.0 3.8e-06 26.8 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 gi|452209054|ref|YP_007489168.1| - 3.2e-05 23.4 0.0 4.6e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB MTS PF05175.14 gi|452209054|ref|YP_007489168.1| - 0.0002 20.9 0.0 0.00029 20.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_12 PF08242.12 gi|452209054|ref|YP_007489168.1| - 0.00024 21.8 0.0 0.00042 21.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 gi|452209054|ref|YP_007489168.1| - 0.00053 20.0 0.0 0.00084 19.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|452209054|ref|YP_007489168.1| - 0.00065 19.5 0.0 0.0012 18.7 0.0 1.5 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) PrmA PF06325.13 gi|452209054|ref|YP_007489168.1| - 0.0028 17.1 0.0 0.0064 15.9 0.0 1.6 1 1 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) RrnaAD PF00398.20 gi|452209054|ref|YP_007489168.1| - 0.0076 15.4 0.0 0.0099 15.0 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_24 PF13578.6 gi|452209054|ref|YP_007489168.1| - 0.01 16.9 0.0 0.037 15.1 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|452209054|ref|YP_007489168.1| - 0.022 14.1 0.0 0.033 13.5 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_16 PF10294.9 gi|452209054|ref|YP_007489168.1| - 0.062 13.0 0.1 0.1 12.4 0.1 1.5 1 1 0 1 1 1 0 Lysine methyltransferase TPMT PF05724.11 gi|452209054|ref|YP_007489168.1| - 0.066 12.9 0.0 0.083 12.5 0.0 1.4 1 1 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) MetW PF07021.12 gi|452209054|ref|YP_007489168.1| - 0.099 12.2 0.2 0.17 11.5 0.0 1.5 2 0 0 2 2 2 0 Methionine biosynthesis protein MetW Methyltransf_18 PF12847.7 gi|452209054|ref|YP_007489168.1| - 0.11 12.4 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain FtsJ PF01728.19 gi|452209054|ref|YP_007489168.1| - 0.16 12.1 0.0 0.22 11.6 0.0 1.2 1 0 0 1 1 1 0 FtsJ-like methyltransferase GrpB PF04229.14 gi|452209055|ref|YP_007489169.1| - 1.6e-45 155.2 0.0 1.8e-45 155.0 0.0 1.0 1 0 0 1 1 1 1 GrpB protein MHB PF16525.5 gi|452209055|ref|YP_007489169.1| - 0.00033 20.8 0.0 0.00066 19.9 0.0 1.5 1 0 0 1 1 1 1 Haemophore, haem-binding Cupin_2 PF07883.11 gi|452209057|ref|YP_007489171.1| - 1.5e-06 27.8 0.0 3.3e-06 26.7 0.0 1.6 1 1 1 2 2 2 1 Cupin domain AraC_binding PF02311.19 gi|452209057|ref|YP_007489171.1| - 5.9e-05 23.0 0.0 0.00012 22.0 0.0 1.5 1 1 1 2 2 2 1 AraC-like ligand binding domain Cupin_3 PF05899.12 gi|452209057|ref|YP_007489171.1| - 0.077 12.7 0.0 0.1 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF861) MannoseP_isomer PF01050.18 gi|452209057|ref|YP_007489171.1| - 0.17 11.8 0.0 0.24 11.3 0.0 1.2 1 0 0 1 1 1 0 Mannose-6-phosphate isomerase DUF2795 PF11387.8 gi|452209059|ref|YP_007489173.1| - 4.3e-12 46.1 0.0 5.8e-12 45.6 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2795) Transglut_core PF01841.19 gi|452209060|ref|YP_007489174.1| - 2.4e-13 50.5 0.0 3.5e-13 50.0 0.0 1.2 1 0 0 1 1 1 1 Transglutaminase-like superfamily DUF4731 PF15875.5 gi|452209060|ref|YP_007489174.1| - 0.12 12.6 0.0 0.3 11.3 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4731) Hydrolase_3 PF08282.12 gi|452209061|ref|YP_007489175.1| - 2.5e-29 102.8 3.3 2.2e-21 76.7 0.8 2.1 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase S6PP PF05116.13 gi|452209061|ref|YP_007489175.1| - 3e-08 33.5 0.0 1.6e-06 27.9 0.0 2.1 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase Hydrolase PF00702.26 gi|452209061|ref|YP_007489175.1| - 4e-07 30.5 3.7 0.00097 19.5 0.3 2.7 1 1 1 3 3 3 2 haloacid dehalogenase-like hydrolase Trehalose_PPase PF02358.16 gi|452209061|ref|YP_007489175.1| - 0.00026 20.2 0.0 0.00044 19.5 0.0 1.4 1 0 0 1 1 1 1 Trehalose-phosphatase HAD PF12710.7 gi|452209061|ref|YP_007489175.1| - 0.002 18.6 0.4 8.4 6.7 0.0 3.3 2 1 1 3 3 3 2 haloacid dehalogenase-like hydrolase Rad51 PF08423.11 gi|452209062|ref|YP_007489176.1| - 1.1e-85 286.9 0.0 1.5e-85 286.6 0.0 1.1 1 0 0 1 1 1 1 Rad51 HHH_5 PF14520.6 gi|452209062|ref|YP_007489176.1| - 2.8e-13 50.2 0.5 9.1e-13 48.6 0.6 1.8 2 0 0 2 2 1 1 Helix-hairpin-helix domain RecA PF00154.21 gi|452209062|ref|YP_007489176.1| - 3.8e-09 36.4 0.1 1.3e-07 31.4 0.1 2.2 1 1 0 1 1 1 1 recA bacterial DNA recombination protein AAA_25 PF13481.6 gi|452209062|ref|YP_007489176.1| - 2e-07 30.8 0.0 3.1e-07 30.1 0.0 1.3 1 0 0 1 1 1 1 AAA domain ATPase PF06745.13 gi|452209062|ref|YP_007489176.1| - 2.1e-06 27.3 0.7 4.2e-06 26.3 0.7 1.5 1 1 0 1 1 1 1 KaiC HHH PF00633.23 gi|452209062|ref|YP_007489176.1| - 2.6e-06 27.0 3.3 0.004 17.0 0.2 2.5 2 0 0 2 2 2 2 Helix-hairpin-helix motif HHH_2 PF12826.7 gi|452209062|ref|YP_007489176.1| - 2.9e-06 27.3 0.2 6.2e-06 26.2 0.2 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix motif Cdd1 PF11731.8 gi|452209062|ref|YP_007489176.1| - 0.00014 22.0 0.0 0.00036 20.7 0.0 1.7 1 1 0 1 1 1 1 Pathogenicity locus DNA_pol_lambd_f PF10391.9 gi|452209062|ref|YP_007489176.1| - 0.00067 19.4 0.0 0.0028 17.4 0.0 2.0 1 1 1 2 2 2 1 Fingers domain of DNA polymerase lambda AAA_22 PF13401.6 gi|452209062|ref|YP_007489176.1| - 0.0021 18.3 0.0 0.0046 17.2 0.0 1.5 1 0 0 1 1 1 1 AAA domain IMS_HHH PF11798.8 gi|452209062|ref|YP_007489176.1| - 0.0023 18.2 0.0 0.011 16.0 0.0 2.2 2 0 0 2 2 2 1 IMS family HHH motif AAA_24 PF13479.6 gi|452209062|ref|YP_007489176.1| - 0.0032 17.2 0.0 0.0063 16.2 0.0 1.5 1 0 0 1 1 1 1 AAA domain HHH_3 PF12836.7 gi|452209062|ref|YP_007489176.1| - 0.0064 16.7 0.2 2.4 8.5 0.1 2.6 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_8 PF14716.6 gi|452209062|ref|YP_007489176.1| - 0.007 16.7 0.2 0.5 10.8 0.0 2.6 2 0 0 2 2 2 1 Helix-hairpin-helix domain BAF PF02961.14 gi|452209062|ref|YP_007489176.1| - 0.011 16.1 0.0 0.1 13.1 0.0 2.2 2 0 0 2 2 2 0 Barrier to autointegration factor LytR_C PF13399.6 gi|452209062|ref|YP_007489176.1| - 0.038 15.0 0.2 0.73 10.9 0.2 2.5 3 0 0 3 3 2 0 LytR cell envelope-related transcriptional attenuator DUF4332 PF14229.6 gi|452209062|ref|YP_007489176.1| - 0.069 13.4 0.0 0.2 11.9 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4332) AAA_18 PF13238.6 gi|452209062|ref|YP_007489176.1| - 0.076 13.6 0.1 0.35 11.4 0.0 2.1 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|452209062|ref|YP_007489176.1| - 0.1 12.5 0.0 0.2 11.5 0.0 1.5 1 1 0 1 1 1 0 NACHT domain ATPase_2 PF01637.18 gi|452209062|ref|YP_007489176.1| - 0.11 12.4 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea TrwB_AAD_bind PF10412.9 gi|452209062|ref|YP_007489176.1| - 0.19 10.6 0.2 0.41 9.5 0.2 1.5 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain CTP_transf_like PF01467.26 gi|452209063|ref|YP_007489177.1| - 2.7e-12 47.1 0.0 3.2e-12 46.9 0.0 1.0 1 0 0 1 1 1 1 Cytidylyltransferase-like FAD_syn PF06574.12 gi|452209063|ref|YP_007489177.1| - 0.12 12.2 0.0 0.22 11.4 0.0 1.5 1 0 0 1 1 1 0 FAD synthetase DUF3775 PF12616.8 gi|452209064|ref|YP_007489178.1| - 0.081 13.0 0.4 0.13 12.3 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3775) AP_endonuc_2 PF01261.24 gi|452209065|ref|YP_007489179.1| - 2.5e-19 69.6 0.0 3e-19 69.3 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel DUF739 PF05339.11 gi|452209066|ref|YP_007489180.1| - 0.042 14.0 0.8 0.67 10.1 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF739) AAA PF00004.29 gi|452209066|ref|YP_007489180.1| - 0.12 12.8 0.2 0.12 12.8 0.2 1.8 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) ABC_tran PF00005.27 gi|452209067|ref|YP_007489181.1| - 2.6e-32 112.2 0.0 3.9e-32 111.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|452209067|ref|YP_007489181.1| - 2.2e-12 47.4 0.6 2.7e-07 30.7 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|452209067|ref|YP_007489181.1| - 3.1e-07 30.1 0.0 5.7e-07 29.2 0.0 1.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|452209067|ref|YP_007489181.1| - 0.00099 18.8 0.1 0.002 17.8 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 gi|452209067|ref|YP_007489181.1| - 0.0038 17.0 0.3 0.012 15.4 0.1 1.7 2 0 0 2 2 2 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|452209067|ref|YP_007489181.1| - 0.0038 17.1 0.0 0.0097 15.8 0.0 1.6 1 0 0 1 1 1 1 RsgA GTPase AAA_23 PF13476.6 gi|452209067|ref|YP_007489181.1| - 0.015 15.8 0.1 0.027 15.0 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 gi|452209067|ref|YP_007489181.1| - 0.045 13.3 0.0 0.11 12.0 0.0 1.6 2 0 0 2 2 2 0 P-loop containing dynein motor region Pr_beta_C PF12465.8 gi|452209067|ref|YP_007489181.1| - 0.12 11.8 0.0 0.28 10.6 0.0 1.6 1 0 0 1 1 1 0 Proteasome beta subunits C terminal CbiQ PF02361.16 gi|452209068|ref|YP_007489182.1| - 3.8e-44 150.9 10.8 3.8e-44 150.9 10.8 1.7 1 1 1 2 2 2 1 Cobalt transport protein OstA_2 PF13100.6 gi|452209068|ref|YP_007489182.1| - 0.25 10.9 0.0 0.38 10.4 0.0 1.3 1 0 0 1 1 1 0 OstA-like protein CbiN PF02553.15 gi|452209069|ref|YP_007489183.1| - 2.2e-24 85.2 0.2 2.6e-24 84.9 0.2 1.1 1 0 0 1 1 1 1 Cobalt transport protein component CbiN CbiM PF01891.16 gi|452209070|ref|YP_007489184.1| - 8.6e-51 172.7 21.0 9.7e-51 172.5 21.0 1.0 1 0 0 1 1 1 1 Cobalt uptake substrate-specific transmembrane region SNARE_assoc PF09335.11 gi|452209071|ref|YP_007489185.1| - 9.4e-17 61.6 5.9 9.4e-17 61.6 5.9 1.7 2 0 0 2 2 2 1 SNARE associated Golgi protein Sm_multidrug_ex PF06695.11 gi|452209071|ref|YP_007489185.1| - 0.0012 19.5 0.8 0.0019 18.9 0.6 1.4 1 1 0 1 1 1 1 Putative small multi-drug export protein DUF4112 PF13430.6 gi|452209071|ref|YP_007489185.1| - 0.11 12.8 1.1 0.23 11.7 0.4 2.0 2 1 0 2 2 2 0 Domain of unknown function (DUF4112) S-layer PF07752.11 gi|452209073|ref|YP_007489187.1| - 1.3e-200 663.5 18.3 4.9e-103 343.7 6.6 2.4 2 0 0 2 2 2 2 S-layer protein CARDB PF07705.11 gi|452209073|ref|YP_007489187.1| - 1.2e-09 38.4 1.6 5.9e-09 36.1 1.6 2.2 1 0 0 1 1 1 1 CARDB CarbopepD_reg_2 PF13715.6 gi|452209073|ref|YP_007489187.1| - 3.3e-07 30.2 3.9 6.5e-06 26.1 0.1 4.1 4 0 0 4 4 4 1 CarboxypepD_reg-like domain CarboxypepD_reg PF13620.6 gi|452209073|ref|YP_007489187.1| - 3.6e-07 30.4 13.2 2.2e-06 27.8 1.6 4.5 4 0 0 4 4 4 1 Carboxypeptidase regulatory-like domain YtkA PF13115.6 gi|452209073|ref|YP_007489187.1| - 0.00023 21.7 7.2 0.02 15.5 0.0 3.9 4 1 0 4 4 4 1 YtkA-like tRNA-synt_1c_C PF03950.18 gi|452209073|ref|YP_007489187.1| - 0.0053 16.7 0.1 1.6 8.6 0.0 3.6 4 0 0 4 4 4 1 tRNA synthetases class I (E and Q), anti-codon binding domain Big_4 PF07532.11 gi|452209073|ref|YP_007489187.1| - 0.0088 15.8 0.7 3.5 7.4 0.0 3.2 2 0 0 2 2 2 1 Bacterial Ig-like domain (group 4) Cupredoxin_1 PF13473.6 gi|452209073|ref|YP_007489187.1| - 0.014 15.5 2.0 0.23 11.6 0.3 3.4 4 1 1 5 5 4 0 Cupredoxin-like domain A2M PF00207.22 gi|452209073|ref|YP_007489187.1| - 0.028 14.3 0.1 3.6 7.5 0.0 3.4 3 0 0 3 3 3 0 Alpha-2-macroglobulin family DUF4198 PF10670.9 gi|452209073|ref|YP_007489187.1| - 0.04 14.3 3.5 2.8 8.3 0.1 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4198) Gram_pos_anchor PF00746.21 gi|452209073|ref|YP_007489187.1| - 0.057 13.4 0.1 0.14 12.1 0.1 1.6 1 0 0 1 1 1 0 LPXTG cell wall anchor motif Fn3-like PF14310.6 gi|452209073|ref|YP_007489187.1| - 0.31 11.2 3.4 1.4 9.1 0.3 3.1 3 1 0 3 3 2 0 Fibronectin type III-like domain ASH PF15780.5 gi|452209073|ref|YP_007489187.1| - 0.46 10.7 2.0 3.3 8.0 0.9 2.9 3 0 0 3 3 2 0 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin Big_3_5 PF16640.5 gi|452209073|ref|YP_007489187.1| - 1.5 9.0 18.1 0.25 11.6 5.9 3.8 3 0 0 3 3 3 0 Bacterial Ig-like domain (group 3) CBM60 PF16841.5 gi|452209073|ref|YP_007489187.1| - 3.6 8.1 7.4 1.5 9.3 0.3 3.6 5 0 0 5 5 4 0 Ca-dependent carbohydrate-binding module xylan-binding Big_1 PF02369.16 gi|452209073|ref|YP_007489187.1| - 5.7 7.0 17.3 12 6.0 1.1 4.1 3 0 0 3 3 3 0 Bacterial Ig-like domain (group 1) Vut_1 PF02592.15 gi|452209074|ref|YP_007489188.1| - 1.7e-35 122.5 7.6 1.7e-35 122.5 7.6 2.0 2 0 0 2 2 2 1 Putative vitamin uptake transporter Tmpp129 PF10272.9 gi|452209074|ref|YP_007489188.1| - 0.021 14.2 0.2 0.034 13.5 0.2 1.4 1 0 0 1 1 1 0 Putative transmembrane protein precursor DDDD PF10161.9 gi|452209074|ref|YP_007489188.1| - 0.083 12.7 0.2 0.74 9.6 0.0 2.4 2 0 0 2 2 2 0 Putative mitochondrial precursor protein tRNA_NucTransf2 PF09249.11 gi|452209075|ref|YP_007489189.1| - 1.6e-44 150.8 0.0 3.6e-44 149.6 0.0 1.6 2 0 0 2 2 2 1 tRNA nucleotidyltransferase, second domain NTP_transf_2 PF01909.23 gi|452209075|ref|YP_007489189.1| - 3.6e-11 43.2 0.0 2e-10 40.8 0.0 2.4 1 1 0 1 1 1 1 Nucleotidyltransferase domain DNA_pol_B_palm PF14792.6 gi|452209075|ref|YP_007489189.1| - 0.031 14.5 0.0 0.07 13.3 0.0 1.6 1 0 0 1 1 1 0 DNA polymerase beta palm SMODS PF18144.1 gi|452209075|ref|YP_007489189.1| - 0.038 14.2 0.0 0.11 12.7 0.0 1.7 1 1 0 1 1 1 0 Second Messenger Oligonucleotide or Dinucleotide Synthetase domain ETRAMP PF09716.10 gi|452209076|ref|YP_007489190.1| - 0.52 10.4 3.2 0.5 10.5 1.2 2.2 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) OGG_N PF07934.12 gi|452209077|ref|YP_007489191.1| - 8.4e-21 74.3 0.8 9.5e-20 70.9 0.8 2.3 1 1 0 1 1 1 1 8-oxoguanine DNA glycosylase, N-terminal domain HhH-GPD PF00730.25 gi|452209077|ref|YP_007489191.1| - 2.7e-07 31.0 0.0 6.6e-07 29.8 0.0 1.6 2 0 0 2 2 2 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|452209077|ref|YP_007489191.1| - 0.0087 15.9 0.0 0.02 14.8 0.0 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix motif ArgJ PF01960.18 gi|452209079|ref|YP_007489193.1| - 5.2e-136 453.3 2.6 6e-136 453.1 2.6 1.0 1 0 0 1 1 1 1 ArgJ family CBS PF00571.28 gi|452209080|ref|YP_007489194.1| - 8.5e-35 119.0 2.4 8.6e-17 61.3 0.1 2.2 2 0 0 2 2 2 2 CBS domain Peptidase_S55 PF05580.12 gi|452209080|ref|YP_007489194.1| - 0.016 15.1 0.1 0.36 10.7 0.0 2.2 2 0 0 2 2 2 0 SpoIVB peptidase S55 GCV_T_C PF08669.11 gi|452209080|ref|YP_007489194.1| - 0.15 12.0 0.0 26 4.8 0.0 2.4 2 0 0 2 2 2 0 Glycine cleavage T-protein C-terminal barrel domain Semialdhyde_dh PF01118.24 gi|452209081|ref|YP_007489195.1| - 2.3e-31 108.8 0.0 3.6e-31 108.1 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.18 gi|452209081|ref|YP_007489195.1| - 1.7e-24 86.9 0.0 2.2e-24 86.6 0.0 1.1 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain GFO_IDH_MocA PF01408.22 gi|452209081|ref|YP_007489195.1| - 0.023 15.5 0.0 0.088 13.6 0.0 1.9 2 0 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold Pilin_N PF07790.11 gi|452209082|ref|YP_007489196.1| - 3.2e-08 34.4 0.1 7.5e-08 33.2 0.1 1.6 2 0 0 2 2 2 1 Archaeal Type IV pilin, N-terminal GATase_2 PF00310.21 gi|452209082|ref|YP_007489196.1| - 0.15 10.7 0.0 0.19 10.4 0.0 1.1 1 0 0 1 1 1 0 Glutamine amidotransferases class-II Nuc_deoxyrib_tr PF05014.15 gi|452209083|ref|YP_007489197.1| - 1.6e-29 102.6 0.1 1.8e-29 102.4 0.1 1.0 1 0 0 1 1 1 1 Nucleoside 2-deoxyribosyltransferase Nuc_deoxyri_tr2 PF15891.5 gi|452209083|ref|YP_007489197.1| - 1e-19 70.9 0.0 1.4e-19 70.4 0.0 1.2 1 0 0 1 1 1 1 Nucleoside 2-deoxyribosyltransferase like LDcluster4 PF18306.1 gi|452209083|ref|YP_007489197.1| - 0.0016 18.1 0.0 0.0025 17.4 0.0 1.3 1 0 0 1 1 1 1 SLOG cluster4 family TIR_2 PF13676.6 gi|452209083|ref|YP_007489197.1| - 0.0085 16.7 0.0 0.02 15.5 0.0 1.6 1 1 0 1 1 1 1 TIR domain Nuc_deoxyri_tr3 PF11071.8 gi|452209083|ref|YP_007489197.1| - 0.036 14.1 0.0 0.045 13.8 0.0 1.3 1 0 0 1 1 1 0 Nucleoside 2-deoxyribosyltransferase YtoQ DUF4406 PF14359.6 gi|452209083|ref|YP_007489197.1| - 0.044 14.3 0.0 0.073 13.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4406) Transferrin PF00405.17 gi|452209083|ref|YP_007489197.1| - 0.086 12.0 0.0 0.11 11.6 0.0 1.1 1 0 0 1 1 1 0 Transferrin Mn_catalase PF05067.12 gi|452209083|ref|YP_007489197.1| - 0.1 11.6 0.0 0.12 11.3 0.0 1.2 1 0 0 1 1 1 0 Manganese containing catalase Acetyltransf_7 PF13508.7 gi|452209085|ref|YP_007489199.1| - 3.6e-09 36.9 0.0 4.6e-09 36.6 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|452209085|ref|YP_007489199.1| - 7.9e-09 35.5 0.1 2.7e-08 33.8 0.0 1.6 1 1 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|452209085|ref|YP_007489199.1| - 7.3e-08 32.7 0.1 1.1e-07 32.0 0.1 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_9 PF13527.7 gi|452209085|ref|YP_007489199.1| - 0.0059 16.7 0.0 0.15 12.1 0.0 2.0 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|452209085|ref|YP_007489199.1| - 0.052 14.2 0.0 0.068 13.9 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Terminase_4 PF05119.12 gi|452209086|ref|YP_007489200.1| - 0.41 11.1 3.5 10 6.6 0.0 3.4 2 1 1 3 3 3 0 Phage terminase, small subunit HSP20 PF00011.21 gi|452209088|ref|YP_007489202.1| - 5.7e-22 77.8 0.9 7.2e-22 77.5 0.9 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|452209088|ref|YP_007489202.1| - 3.2e-12 45.8 0.0 4.4e-12 45.4 0.0 1.2 1 0 0 1 1 1 1 HSP20-like domain found in ArsA CS PF04969.16 gi|452209088|ref|YP_007489202.1| - 0.00042 21.3 0.0 0.00068 20.6 0.0 1.3 1 0 0 1 1 1 1 CS domain FKBP26_C PF18046.1 gi|452209088|ref|YP_007489202.1| - 0.062 13.4 0.6 8.9 6.5 0.1 2.4 2 0 0 2 2 2 0 FKBP26_C-terminal AMMECR1 PF01871.17 gi|452209089|ref|YP_007489203.1| - 1.8e-46 157.8 0.0 2e-46 157.6 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 HAP2-GCS1 PF10699.9 gi|452209089|ref|YP_007489203.1| - 0.16 12.0 0.0 0.36 10.8 0.0 1.6 1 0 0 1 1 1 0 Male gamete fusion factor PGK PF00162.19 gi|452209090|ref|YP_007489204.1| - 3.2e-110 368.6 1.3 3.7e-110 368.4 1.3 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase HSP20 PF00011.21 gi|452209091|ref|YP_007489205.1| - 2.6e-06 27.5 0.9 2.8e-05 24.2 0.9 2.0 1 1 0 1 1 1 1 Hsp20/alpha crystallin family Fer4 PF00037.27 gi|452209092|ref|YP_007489206.1| - 8.8e-12 44.3 14.7 4.7e-07 29.4 6.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|452209092|ref|YP_007489206.1| - 1.2e-10 41.3 8.6 1.6e-10 40.9 8.6 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|452209092|ref|YP_007489206.1| - 3.9e-10 39.4 13.7 3.8e-05 23.6 0.7 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|452209092|ref|YP_007489206.1| - 1.4e-09 38.4 7.9 1.9e-09 38.0 7.9 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452209092|ref|YP_007489206.1| - 2.2e-09 37.3 7.9 2.6e-09 37.1 7.9 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452209092|ref|YP_007489206.1| - 7.3e-09 35.2 11.4 0.00025 20.9 0.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|452209092|ref|YP_007489206.1| - 1.5e-07 31.4 9.9 2.4e-07 30.8 9.9 1.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452209092|ref|YP_007489206.1| - 2.1e-06 28.6 8.0 0.00036 21.4 3.0 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|452209092|ref|YP_007489206.1| - 8.7e-06 25.9 7.5 0.00029 21.1 2.3 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|452209092|ref|YP_007489206.1| - 1.2e-05 25.9 12.1 0.00037 21.2 3.7 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|452209092|ref|YP_007489206.1| - 0.00029 21.3 13.6 0.0085 16.6 13.6 2.1 1 1 0 1 1 1 1 4Fe-4S single cluster domain of Ferredoxin I ETF_QO PF05187.13 gi|452209092|ref|YP_007489206.1| - 0.00034 20.7 3.1 0.00039 20.5 3.1 1.1 1 0 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_17 PF13534.6 gi|452209092|ref|YP_007489206.1| - 0.00048 20.6 10.8 0.0056 17.2 3.3 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|452209092|ref|YP_007489206.1| - 0.00067 20.1 11.1 0.087 13.3 4.7 2.1 1 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|452209092|ref|YP_007489206.1| - 0.0012 19.5 12.1 0.0076 17.0 0.3 2.5 1 1 1 2 2 2 1 4Fe-4S single cluster domain Fer4_18 PF13746.6 gi|452209092|ref|YP_007489206.1| - 0.016 15.4 9.5 0.039 14.2 3.8 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain Rep_fac-A_C PF08646.10 gi|452209092|ref|YP_007489206.1| - 0.22 11.3 2.9 0.23 11.2 2.9 1.1 1 0 0 1 1 1 0 Replication factor-A C terminal domain Fer4 PF00037.27 gi|452209093|ref|YP_007489207.1| - 6.9e-13 47.8 13.3 3.1e-08 33.1 5.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|452209093|ref|YP_007489207.1| - 4.2e-11 42.8 6.8 4.6e-11 42.7 6.8 1.0 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|452209093|ref|YP_007489207.1| - 4.9e-11 43.0 9.0 6.3e-11 42.7 9.0 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|452209093|ref|YP_007489207.1| - 1.5e-10 41.0 9.3 2.4e-10 40.4 9.3 1.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|452209093|ref|YP_007489207.1| - 2.5e-10 40.0 13.2 6.3e-05 22.9 0.7 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|452209093|ref|YP_007489207.1| - 1.8e-09 37.6 7.3 2.1e-09 37.4 7.3 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452209093|ref|YP_007489207.1| - 8.1e-08 33.1 7.0 3.4e-05 24.7 2.2 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|452209093|ref|YP_007489207.1| - 4.7e-07 29.5 11.1 0.0012 18.8 4.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|452209093|ref|YP_007489207.1| - 2.4e-05 24.9 10.6 0.00011 22.9 4.2 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_13 PF13370.6 gi|452209093|ref|YP_007489207.1| - 3.6e-05 24.2 13.1 0.0009 19.7 13.1 2.2 1 1 0 1 1 1 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_17 PF13534.6 gi|452209093|ref|YP_007489207.1| - 7.9e-05 23.1 9.6 0.0028 18.2 3.4 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|452209093|ref|YP_007489207.1| - 0.00015 22.0 13.4 0.0054 17.1 5.0 2.4 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|452209093|ref|YP_007489207.1| - 0.00018 21.9 9.5 0.0019 18.6 9.5 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|452209093|ref|YP_007489207.1| - 0.00038 20.6 10.7 0.00057 20.1 4.2 2.0 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|452209093|ref|YP_007489207.1| - 0.0024 18.7 4.5 0.23 12.4 1.3 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain ETF_QO PF05187.13 gi|452209093|ref|YP_007489207.1| - 0.0095 16.1 2.4 0.01 15.9 2.4 1.1 1 0 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_15 PF13459.6 gi|452209093|ref|YP_007489207.1| - 0.056 14.2 13.1 4.4 8.1 13.0 2.6 1 1 0 1 1 1 0 4Fe-4S single cluster domain Toxin_2 PF00451.19 gi|452209093|ref|YP_007489207.1| - 1.3 9.4 9.3 1.3 9.4 0.4 2.2 2 0 0 2 2 2 0 Scorpion short toxin, BmKK2 HEAT_2 PF13646.6 gi|452209094|ref|YP_007489208.1| - 5.2e-103 337.6 32.2 8.1e-23 80.6 0.8 6.7 1 1 7 8 8 8 8 HEAT repeats HEAT_PBS PF03130.16 gi|452209094|ref|YP_007489208.1| - 6.1e-54 175.2 17.5 0.0001 22.7 0.2 12.3 12 0 0 12 12 12 10 PBS lyase HEAT-like repeat HEAT PF02985.22 gi|452209094|ref|YP_007489208.1| - 2.9e-46 151.5 0.3 0.00021 21.3 0.0 11.9 12 0 0 12 12 12 7 HEAT repeat HEAT_EZ PF13513.6 gi|452209094|ref|YP_007489208.1| - 3.9e-37 126.2 11.9 9.9e-05 22.8 0.1 10.9 8 4 4 12 12 12 7 HEAT-like repeat Arm PF00514.23 gi|452209094|ref|YP_007489208.1| - 4.6e-22 77.3 0.1 0.0033 17.4 0.0 9.8 7 4 4 11 11 11 5 Armadillo/beta-catenin-like repeat Cnd1 PF12717.7 gi|452209094|ref|YP_007489208.1| - 8.8e-16 58.4 0.0 0.0025 17.9 0.0 6.2 2 2 4 7 7 7 4 non-SMC mitotic condensation complex subunit 1 Adaptin_N PF01602.20 gi|452209094|ref|YP_007489208.1| - 3e-10 39.3 0.0 4.7e-05 22.2 0.0 2.9 2 1 0 2 2 2 2 Adaptin N terminal region ERAP1_C PF11838.8 gi|452209094|ref|YP_007489208.1| - 9.9e-07 28.6 0.0 0.00093 18.8 0.0 3.4 1 1 2 3 3 3 2 ERAP1-like C-terminal domain Aconitase_B_N PF11791.8 gi|452209094|ref|YP_007489208.1| - 6e-06 26.4 0.0 6.2 6.9 0.0 6.2 4 2 3 7 7 7 1 Aconitate B N-terminal domain Vitellogenin_N PF01347.22 gi|452209094|ref|YP_007489208.1| - 0.00012 20.6 0.0 0.52 8.6 0.0 3.9 3 1 1 4 4 4 1 Lipoprotein amino terminal region ALF PF03752.13 gi|452209094|ref|YP_007489208.1| - 0.00014 21.7 0.2 4.1 7.4 0.0 5.1 5 0 0 5 5 5 1 Short repeats of unknown function CLASP_N PF12348.8 gi|452209094|ref|YP_007489208.1| - 0.00031 20.4 0.0 6.9 6.2 0.0 4.4 4 1 0 4 4 4 1 CLASP N terminal RasGEF_N_2 PF14663.6 gi|452209094|ref|YP_007489208.1| - 0.00034 21.0 0.1 72 3.8 0.0 5.9 4 3 3 7 7 7 0 Rapamycin-insensitive companion of mTOR RasGEF_N domain IFRD PF05004.13 gi|452209094|ref|YP_007489208.1| - 0.0016 17.6 0.8 2.1 7.4 0.0 5.1 2 2 4 7 7 7 1 Interferon-related developmental regulator (IFRD) UPF0147 PF03685.13 gi|452209094|ref|YP_007489208.1| - 0.0059 16.6 0.2 0.28 11.3 0.0 3.8 4 0 0 4 4 4 1 Uncharacterised protein family (UPF0147) V-ATPase_H_C PF11698.8 gi|452209094|ref|YP_007489208.1| - 0.016 15.3 0.0 14 5.9 0.0 3.9 2 1 1 3 3 3 0 V-ATPase subunit H DNA_alkylation PF08713.11 gi|452209094|ref|YP_007489208.1| - 0.055 13.2 0.0 0.72 9.5 0.0 2.9 1 1 0 2 2 2 0 DNA alkylation repair enzyme Gp49 PF05973.14 gi|452209094|ref|YP_007489208.1| - 0.13 12.4 0.0 4.5 7.5 0.0 3.1 3 0 0 3 3 3 0 Phage derived protein Gp49-like (DUF891) AFOR_N PF02730.15 gi|452209094|ref|YP_007489208.1| - 0.13 12.1 0.0 0.28 11.0 0.0 1.4 1 0 0 1 1 1 0 Aldehyde ferredoxin oxidoreductase, N-terminal domain API5 PF05918.11 gi|452209094|ref|YP_007489208.1| - 0.39 9.5 0.7 53 2.4 0.1 3.6 4 1 1 5 5 5 0 Apoptosis inhibitory protein 5 (API5) ATP-grasp_5 PF13549.6 gi|452209096|ref|YP_007489210.1| - 2.9e-81 272.2 0.2 3.4e-81 271.9 0.2 1.0 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_2 PF08442.10 gi|452209096|ref|YP_007489210.1| - 0.00074 19.1 0.5 0.0022 17.6 0.5 1.8 1 1 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|452209096|ref|YP_007489210.1| - 0.011 15.3 0.1 0.019 14.5 0.1 1.3 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain Acetate_kinase PF00871.17 gi|452209097|ref|YP_007489211.1| - 2.5e-160 533.5 0.9 2.9e-160 533.3 0.9 1.0 1 0 0 1 1 1 1 Acetokinase family ROK PF00480.20 gi|452209097|ref|YP_007489211.1| - 0.037 13.5 0.3 0.078 12.4 0.3 1.6 1 1 0 1 1 1 0 ROK family DUF211 PF02680.14 gi|452209097|ref|YP_007489211.1| - 0.079 13.1 2.2 1.5 9.1 0.2 2.8 2 1 0 2 2 2 0 Uncharacterized ArCR, COG1888 PTA_PTB PF01515.19 gi|452209098|ref|YP_007489212.1| - 2e-129 431.5 4.7 2.3e-129 431.3 4.7 1.0 1 0 0 1 1 1 1 Phosphate acetyl/butaryl transferase DUF3663 PF12404.8 gi|452209098|ref|YP_007489212.1| - 0.049 13.7 0.2 0.12 12.4 0.1 1.7 2 0 0 2 2 2 0 Peptidase LpxI_N PF17930.1 gi|452209098|ref|YP_007489212.1| - 0.055 13.4 0.1 0.1 12.5 0.1 1.5 1 0 0 1 1 1 0 LpxI N-terminal domain Rotavirus_VP3 PF06929.11 gi|452209098|ref|YP_007489212.1| - 0.15 10.3 0.0 0.2 9.9 0.0 1.1 1 0 0 1 1 1 0 Rotavirus VP3 protein FMN_red PF03358.15 gi|452209099|ref|YP_007489213.1| - 3.8e-38 130.7 0.0 4.6e-38 130.4 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|452209099|ref|YP_007489213.1| - 1.5e-13 50.9 0.0 2e-13 50.5 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.7 gi|452209099|ref|YP_007489213.1| - 0.016 15.5 0.0 0.022 15.0 0.0 1.3 1 0 0 1 1 1 0 Flavodoxin domain Flavodoxin_1 PF00258.25 gi|452209099|ref|YP_007489213.1| - 0.029 14.6 0.0 0.042 14.1 0.0 1.3 1 0 0 1 1 1 0 Flavodoxin Voltage_CLC PF00654.20 gi|452209100|ref|YP_007489214.1| - 2.1e-85 287.1 40.2 2.2e-84 283.7 33.2 2.0 1 1 1 2 2 2 2 Voltage gated chloride channel CBS PF00571.28 gi|452209100|ref|YP_007489214.1| - 1.4e-21 76.7 0.7 2.6e-10 40.6 0.1 2.6 2 0 0 2 2 2 2 CBS domain AHSA1 PF08327.11 gi|452209102|ref|YP_007489216.1| - 6.5e-25 87.8 0.0 7.9e-25 87.5 0.0 1.1 1 0 0 1 1 1 1 Activator of Hsp90 ATPase homolog 1-like protein Polyketide_cyc2 PF10604.9 gi|452209102|ref|YP_007489216.1| - 0.018 15.3 0.0 0.033 14.5 0.0 1.5 1 1 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport 3-dmu-9_3-mt PF06983.13 gi|452209103|ref|YP_007489217.1| - 1.4e-47 161.0 0.1 1.8e-47 160.7 0.1 1.1 1 0 0 1 1 1 1 3-demethylubiquinone-9 3-methyltransferase Ribonuc_L-PSP PF01042.21 gi|452209104|ref|YP_007489218.1| - 2.1e-17 63.3 0.1 2.8e-17 62.9 0.1 1.1 1 0 0 1 1 1 1 Endoribonuclease L-PSP CPBP PF02517.16 gi|452209107|ref|YP_007489221.1| - 2.8e-09 37.2 8.8 2.8e-09 37.2 8.8 2.0 2 0 0 2 2 2 1 CPBP intramembrane metalloprotease DUF4260 PF14079.6 gi|452209107|ref|YP_007489221.1| - 0.054 13.4 0.5 0.054 13.4 0.5 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4260) DUF2953 PF11167.8 gi|452209107|ref|YP_007489221.1| - 0.48 10.6 4.9 0.5 10.5 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2953) DUF2070 PF09843.9 gi|452209107|ref|YP_007489221.1| - 0.6 8.3 5.2 0.75 8.0 5.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) URO-D PF01208.17 gi|452209109|ref|YP_007489223.1| - 9.9e-76 255.1 0.0 1.1e-75 255.0 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) Adeno_E3_15_3 PF03307.14 gi|452209109|ref|YP_007489223.1| - 0.17 11.9 0.0 0.46 10.4 0.0 1.7 1 0 0 1 1 1 0 Adenovirus 15.3kD protein in E3 region Cupin_2 PF07883.11 gi|452209110|ref|YP_007489224.1| - 2.4e-15 56.0 0.0 3.7e-15 55.4 0.0 1.3 1 0 0 1 1 1 1 Cupin domain Cupin_1 PF00190.22 gi|452209110|ref|YP_007489224.1| - 4.1e-07 29.7 0.0 5e-07 29.4 0.0 1.1 1 0 0 1 1 1 1 Cupin AraC_binding PF02311.19 gi|452209110|ref|YP_007489224.1| - 1.1e-06 28.6 0.0 1.4e-06 28.3 0.0 1.3 1 0 0 1 1 1 1 AraC-like ligand binding domain MannoseP_isomer PF01050.18 gi|452209110|ref|YP_007489224.1| - 2.7e-05 24.1 0.0 3.2e-05 23.8 0.0 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Ectoine_synth PF06339.12 gi|452209110|ref|YP_007489224.1| - 0.00023 21.4 0.1 0.0003 21.0 0.1 1.1 1 0 0 1 1 1 1 Ectoine synthase Cupin_3 PF05899.12 gi|452209110|ref|YP_007489224.1| - 0.00051 19.7 0.0 0.00074 19.2 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Auxin_BP PF02041.16 gi|452209110|ref|YP_007489224.1| - 0.012 15.3 0.0 0.026 14.2 0.0 1.5 1 1 0 1 1 1 0 Auxin binding protein GPI PF06560.11 gi|452209110|ref|YP_007489224.1| - 0.022 14.0 0.0 0.033 13.4 0.0 1.2 1 0 0 1 1 1 0 Glucose-6-phosphate isomerase (GPI) PHP_C PF13263.6 gi|452209112|ref|YP_007489226.1| - 1.4e-22 79.1 0.1 6.2e-22 77.1 0.1 2.0 2 0 0 2 2 2 1 PHP-associated PHP PF02811.19 gi|452209112|ref|YP_007489226.1| - 1e-08 35.6 0.0 8.9e-08 32.6 0.0 2.0 1 1 0 1 1 1 1 PHP domain Milton PF12448.8 gi|452209112|ref|YP_007489226.1| - 0.14 12.3 0.0 14 5.7 0.0 2.2 2 0 0 2 2 2 0 Kinesin associated protein MMR_HSR1 PF01926.23 gi|452209113|ref|YP_007489227.1| - 9.7e-21 74.0 0.0 1.9e-20 73.1 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP-bdg_M PF16360.5 gi|452209113|ref|YP_007489227.1| - 1.2e-13 51.4 1.6 2.3e-13 50.5 1.6 1.4 1 0 0 1 1 1 1 GTP-binding GTPase Middle Region GTP-bdg_N PF13167.6 gi|452209113|ref|YP_007489227.1| - 3.4e-09 37.2 0.1 8.4e-09 36.0 0.1 1.7 1 0 0 1 1 1 1 GTP-binding GTPase N-terminal RsgA_GTPase PF03193.16 gi|452209113|ref|YP_007489227.1| - 4.2e-09 36.5 0.1 0.0003 20.7 0.0 2.3 2 0 0 2 2 2 2 RsgA GTPase MMR_HSR1_Xtn PF16897.5 gi|452209113|ref|YP_007489227.1| - 4.4e-09 36.3 0.0 8.1e-09 35.5 0.0 1.4 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain GTP_EFTU PF00009.27 gi|452209113|ref|YP_007489227.1| - 5.2e-08 32.7 0.0 1.7e-05 24.4 0.0 2.6 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain FeoB_N PF02421.18 gi|452209113|ref|YP_007489227.1| - 7.7e-08 32.0 0.4 3.3e-07 30.0 0.4 2.0 1 1 0 1 1 1 1 Ferrous iron transport protein B cobW PF02492.19 gi|452209113|ref|YP_007489227.1| - 0.00017 21.2 0.4 0.041 13.5 0.0 2.7 2 1 1 3 3 3 1 CobW/HypB/UreG, nucleotide-binding domain Dynamin_N PF00350.23 gi|452209113|ref|YP_007489227.1| - 0.0021 18.1 0.1 0.0079 16.3 0.0 1.9 1 1 1 2 2 2 1 Dynamin family PduV-EutP PF10662.9 gi|452209113|ref|YP_007489227.1| - 0.0067 16.2 0.0 0.53 10.0 0.0 2.3 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation Arf PF00025.21 gi|452209113|ref|YP_007489227.1| - 0.0092 15.4 0.1 0.03 13.8 0.1 1.9 1 1 0 1 1 1 1 ADP-ribosylation factor family MnmE_helical PF12631.7 gi|452209113|ref|YP_007489227.1| - 0.022 14.9 0.0 0.034 14.3 0.0 1.3 1 0 0 1 1 1 0 MnmE helical domain ABC_tran PF00005.27 gi|452209113|ref|YP_007489227.1| - 0.03 14.8 0.0 0.092 13.3 0.0 2.1 1 1 1 2 2 2 0 ABC transporter NOG1 PF06858.14 gi|452209113|ref|YP_007489227.1| - 0.034 13.9 0.3 0.38 10.6 0.0 2.5 2 0 0 2 2 2 0 Nucleolar GTP-binding protein 1 (NOG1) AAA_29 PF13555.6 gi|452209113|ref|YP_007489227.1| - 0.12 12.1 0.0 0.29 10.9 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain Roc PF08477.13 gi|452209113|ref|YP_007489227.1| - 0.13 12.5 0.0 9.1 6.5 0.0 2.4 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase Fzo_mitofusin PF04799.13 gi|452209113|ref|YP_007489227.1| - 0.16 11.5 0.1 9.5 5.7 0.0 2.2 1 1 1 2 2 2 0 fzo-like conserved region AAA_23 PF13476.6 gi|452209113|ref|YP_007489227.1| - 0.33 11.4 3.9 0.47 10.9 0.2 2.3 1 1 1 2 2 2 0 AAA domain DUF2209 PF09974.9 gi|452209114|ref|YP_007489228.1| - 5.8e-52 175.1 0.0 6.7e-52 174.9 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2209) Fer4_NifH PF00142.18 gi|452209115|ref|YP_007489229.1| - 3e-89 299.1 1.2 3.5e-89 298.8 1.2 1.0 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CbiA PF01656.23 gi|452209115|ref|YP_007489229.1| - 9.8e-12 45.1 0.0 1.8e-11 44.2 0.0 1.5 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|452209115|ref|YP_007489229.1| - 9.5e-11 41.6 0.2 5.3e-10 39.2 0.2 2.0 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase AAA_31 PF13614.6 gi|452209115|ref|YP_007489229.1| - 6.7e-10 39.2 0.2 2.6e-09 37.2 0.0 1.9 2 0 0 2 2 2 1 AAA domain ArsA_ATPase PF02374.15 gi|452209115|ref|YP_007489229.1| - 7.2e-09 35.2 0.8 1.5e-07 30.9 0.5 2.1 2 0 0 2 2 2 1 Anion-transporting ATPase MipZ PF09140.11 gi|452209115|ref|YP_007489229.1| - 4.7e-05 22.8 0.1 0.0045 16.3 0.0 2.2 2 0 0 2 2 2 1 ATPase MipZ AAA_24 PF13479.6 gi|452209115|ref|YP_007489229.1| - 6e-05 22.9 0.0 9.3e-05 22.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain MeaB PF03308.16 gi|452209115|ref|YP_007489229.1| - 0.00021 20.4 0.1 0.00033 19.7 0.1 1.2 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB SRP54 PF00448.22 gi|452209115|ref|YP_007489229.1| - 0.0014 18.3 0.1 0.0024 17.5 0.1 1.4 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_25 PF13481.6 gi|452209115|ref|YP_007489229.1| - 0.0077 15.8 0.1 0.016 14.8 0.0 1.5 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|452209115|ref|YP_007489229.1| - 0.011 16.0 0.1 0.047 14.0 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 gi|452209115|ref|YP_007489229.1| - 0.02 15.3 0.1 0.041 14.3 0.0 1.7 2 0 0 2 2 2 0 AAA ATPase domain ATP_bind_1 PF03029.17 gi|452209115|ref|YP_007489229.1| - 0.026 14.3 0.3 0.33 10.7 0.3 2.3 2 1 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_30 PF13604.6 gi|452209115|ref|YP_007489229.1| - 0.033 13.9 0.1 0.58 9.9 0.0 2.1 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 gi|452209115|ref|YP_007489229.1| - 0.078 12.1 0.2 0.13 11.4 0.2 1.4 1 0 0 1 1 1 0 NB-ARC domain ATPase PF06745.13 gi|452209115|ref|YP_007489229.1| - 0.12 11.7 0.2 0.66 9.3 0.1 1.9 2 0 0 2 2 2 0 KaiC RNA_helicase PF00910.22 gi|452209115|ref|YP_007489229.1| - 0.15 12.4 0.0 0.37 11.2 0.0 1.7 2 0 0 2 2 2 0 RNA helicase IstB_IS21 PF01695.17 gi|452209115|ref|YP_007489229.1| - 0.2 11.3 0.3 0.32 10.7 0.3 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein Oxidored_nitro PF00148.19 gi|452209116|ref|YP_007489230.1| - 5.7e-18 64.8 0.1 7.3e-18 64.5 0.1 1.3 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase GvpG PF05120.12 gi|452209116|ref|YP_007489230.1| - 0.0028 17.6 0.1 0.0056 16.7 0.1 1.5 1 0 0 1 1 1 1 Gas vesicle protein G CbiX PF01903.17 gi|452209119|ref|YP_007489233.1| - 1.4e-28 99.3 0.0 1.6e-28 99.2 0.0 1.0 1 0 0 1 1 1 1 CbiX CbiK PF06180.11 gi|452209119|ref|YP_007489233.1| - 1.3e-07 31.2 0.0 1.5e-07 31.0 0.0 1.0 1 0 0 1 1 1 1 Cobalt chelatase (CbiK) Ferrochelatase PF00762.19 gi|452209119|ref|YP_007489233.1| - 0.021 13.9 0.0 0.028 13.5 0.0 1.1 1 0 0 1 1 1 0 Ferrochelatase Tocopherol_cycl PF14249.6 gi|452209120|ref|YP_007489234.1| - 8.5e-23 81.0 0.1 3.8e-19 69.0 0.0 2.0 1 1 0 2 2 2 2 Tocopherol cyclase DUF2892 PF11127.8 gi|452209123|ref|YP_007489237.1| - 6.8e-06 26.0 0.0 1e-05 25.4 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2892) DUF1450 PF07293.11 gi|452209123|ref|YP_007489237.1| - 0.16 11.8 0.0 0.37 10.6 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1450) DUF2892 PF11127.8 gi|452209124|ref|YP_007489238.1| - 0.15 12.1 0.2 0.22 11.6 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2892) Transglut_core PF01841.19 gi|452209125|ref|YP_007489239.1| - 1.4e-09 38.4 0.1 3.3e-09 37.2 0.1 1.7 1 1 0 1 1 1 1 Transglutaminase-like superfamily DUF553 PF04473.12 gi|452209125|ref|YP_007489239.1| - 0.011 15.3 0.3 0.026 14.1 0.3 1.6 1 1 0 1 1 1 0 Transglutaminase-like domain Peptidase_C71 PF12386.8 gi|452209125|ref|YP_007489239.1| - 0.016 14.8 0.9 0.024 14.3 0.9 1.2 1 0 0 1 1 1 0 Pseudomurein endo-isopeptidase Pei Peptidase_C93 PF06035.11 gi|452209125|ref|YP_007489239.1| - 0.11 12.2 0.0 0.17 11.6 0.0 1.3 1 0 0 1 1 1 0 Bacterial transglutaminase-like cysteine proteinase BTLCP Abhydrolase_1 PF00561.20 gi|452209128|ref|YP_007489242.1| - 4.2e-22 79.0 0.0 1e-16 61.4 0.0 2.1 1 1 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|452209128|ref|YP_007489242.1| - 9.4e-16 59.1 0.0 1.1e-15 58.9 0.0 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|452209128|ref|YP_007489242.1| - 6e-09 35.5 0.0 2.6e-08 33.4 0.0 1.9 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Ndr PF03096.14 gi|452209128|ref|YP_007489242.1| - 0.044 12.5 0.0 0.2 10.3 0.0 1.9 1 1 0 1 1 1 0 Ndr family Esterase PF00756.20 gi|452209128|ref|YP_007489242.1| - 0.093 12.4 0.0 0.21 11.2 0.0 1.6 2 0 0 2 2 2 0 Putative esterase AA_permease PF00324.21 gi|452209129|ref|YP_007489243.1| - 1.9e-41 142.2 39.1 3e-41 141.5 39.1 1.2 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 gi|452209129|ref|YP_007489243.1| - 5.5e-41 140.8 48.0 7.3e-41 140.4 48.0 1.1 1 0 0 1 1 1 1 Amino acid permease Usp PF00582.26 gi|452209129|ref|YP_007489243.1| - 6.4e-20 72.1 0.0 1.1e-08 35.6 0.0 3.2 2 1 0 2 2 2 2 Universal stress protein family Spore_permease PF03845.13 gi|452209129|ref|YP_007489243.1| - 4.2e-12 45.6 15.8 4.2e-12 45.6 15.8 2.0 2 0 0 2 2 2 1 Spore germination protein ABC_sub_bind PF04392.12 gi|452209129|ref|YP_007489243.1| - 0.026 13.8 0.0 0.041 13.1 0.0 1.2 1 0 0 1 1 1 0 ABC transporter substrate binding protein Ribosomal_L22e PF01776.17 gi|452209129|ref|YP_007489243.1| - 0.51 10.7 2.4 0.39 11.1 0.5 1.7 2 0 0 2 2 2 0 Ribosomal L22e protein family DUF573 PF04504.14 gi|452209131|ref|YP_007489245.1| - 0.0086 16.7 1.4 0.014 16.0 0.1 1.8 1 1 1 2 2 2 1 Protein of unknown function, DUF573 FANCI_S3 PF14677.6 gi|452209131|ref|YP_007489245.1| - 0.056 13.1 0.1 0.1 12.3 0.0 1.4 1 1 0 1 1 1 0 FANCI solenoid 3 DUF2408 PF10303.9 gi|452209131|ref|YP_007489245.1| - 0.083 13.5 0.6 0.11 13.1 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2408) DUF2963 PF11178.8 gi|452209133|ref|YP_007489247.1| - 0.0015 18.2 0.5 0.0041 16.8 0.5 1.8 1 0 0 1 1 1 1 Protein of unknown function (DUF2963) Acyl_transf_3 PF01757.22 gi|452209135|ref|YP_007489249.1| - 4.2e-28 98.4 46.2 2.7e-27 95.7 46.2 1.9 1 1 0 1 1 1 1 Acyltransferase family CxxCxxCC PF03692.15 gi|452209136|ref|YP_007489250.1| - 0.095 13.4 0.1 0.12 13.1 0.1 1.3 1 0 0 1 1 1 0 Putative zinc- or iron-chelating domain NosD PF05048.13 gi|452209137|ref|YP_007489251.1| - 2.4e-11 43.4 13.5 3.3e-11 42.9 13.5 1.1 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|452209137|ref|YP_007489251.1| - 1.8e-08 34.4 20.7 3.6e-08 33.4 20.7 1.7 1 1 0 1 1 1 1 Right handed beta helix region DUF1565 PF07602.11 gi|452209137|ref|YP_007489251.1| - 0.00013 21.4 13.9 0.00063 19.2 13.9 2.1 1 1 0 1 1 1 1 Protein of unknown function (DUF1565) Cupin_2 PF07883.11 gi|452209138|ref|YP_007489252.1| - 6.9e-18 64.1 0.1 9.3e-18 63.7 0.1 1.2 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 gi|452209138|ref|YP_007489252.1| - 0.00023 21.1 0.0 0.00031 20.7 0.0 1.3 1 0 0 1 1 1 1 AraC-like ligand binding domain CENP-C_C PF11699.8 gi|452209138|ref|YP_007489252.1| - 0.00081 19.6 0.0 0.001 19.2 0.0 1.2 1 0 0 1 1 1 1 Mif2/CENP-C like MannoseP_isomer PF01050.18 gi|452209138|ref|YP_007489252.1| - 0.0012 18.8 0.0 0.0015 18.5 0.0 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Cupin_3 PF05899.12 gi|452209138|ref|YP_007489252.1| - 0.034 13.8 0.0 0.052 13.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF861) Cupin_1 PF00190.22 gi|452209138|ref|YP_007489252.1| - 0.059 13.0 0.0 0.06 13.0 0.0 1.2 1 0 0 1 1 1 0 Cupin DUF3763 PF12592.8 gi|452209139|ref|YP_007489253.1| - 0.026 14.6 0.1 0.041 14.0 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3763) Metallophos PF00149.28 gi|452209140|ref|YP_007489254.1| - 1.3e-14 55.2 1.4 2e-14 54.6 1.4 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|452209140|ref|YP_007489254.1| - 2.8e-09 37.4 0.1 1.2e-08 35.4 0.1 1.7 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos_3 PF14582.6 gi|452209140|ref|YP_007489254.1| - 0.028 13.7 0.0 0.058 12.7 0.0 1.4 1 0 0 1 1 1 0 Metallophosphoesterase, calcineurin superfamily NPAT_C PF15712.5 gi|452209141|ref|YP_007489255.1| - 0.23 10.0 0.7 0.25 10.0 0.7 1.0 1 0 0 1 1 1 0 NPAT C terminus RNB PF00773.19 gi|452209144|ref|YP_007489258.1| - 5.6e-64 216.5 0.0 9.8e-64 215.7 0.0 1.4 1 0 0 1 1 1 1 RNB domain dsrm PF00035.26 gi|452209144|ref|YP_007489258.1| - 1.2e-12 48.3 0.1 5.3e-09 36.7 0.1 2.4 2 0 0 2 2 2 2 Double-stranded RNA binding motif DND1_DSRM PF14709.7 gi|452209144|ref|YP_007489258.1| - 0.0003 21.0 0.6 0.13 12.6 0.6 3.2 2 1 0 2 2 2 2 double strand RNA binding domain from DEAD END PROTEIN 1 ParE_toxin PF05016.15 gi|452209145|ref|YP_007489259.1| - 0.0012 19.5 0.0 0.0015 19.1 0.0 1.1 1 0 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE DUF4358 PF14270.6 gi|452209145|ref|YP_007489259.1| - 0.0029 17.9 0.9 0.0046 17.2 0.4 1.6 1 1 1 2 2 2 1 Domain of unknown function (DUF4358) DUF4748 PF15932.5 gi|452209148|ref|YP_007489262.1| - 0.0047 16.6 3.5 0.0085 15.8 0.0 2.4 2 0 0 2 2 2 1 Domain of unknown function (DUF4748) DUF5336 PF17270.2 gi|452209148|ref|YP_007489262.1| - 0.018 14.7 6.5 0.026 14.1 6.5 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5336) NVEALA PF14055.6 gi|452209148|ref|YP_007489262.1| - 0.076 13.0 4.0 0.13 12.3 0.2 2.8 3 0 0 3 3 3 0 NVEALA protein DUF4407 PF14362.6 gi|452209148|ref|YP_007489262.1| - 0.3 10.4 3.3 0.55 9.5 3.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF456 PF04306.13 gi|452209148|ref|YP_007489262.1| - 0.31 11.3 10.2 0.7 10.2 10.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF456) Fic PF02661.18 gi|452209149|ref|YP_007489263.1| - 3.1e-09 37.6 0.1 5.9e-09 36.7 0.1 1.5 1 0 0 1 1 1 1 Fic/DOC family Cyto_heme_lyase PF01265.17 gi|452209149|ref|YP_007489263.1| - 0.056 13.0 0.1 0.058 13.0 0.1 1.1 1 0 0 1 1 1 0 Cytochrome c/c1 heme lyase Cas_Cas4 PF01930.17 gi|452209154|ref|YP_007489268.1| - 2.5e-15 56.9 6.9 3.2e-15 56.6 6.9 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF83 PDDEXK_1 PF12705.7 gi|452209154|ref|YP_007489268.1| - 5.2e-08 33.1 2.1 6.7e-08 32.8 2.1 1.2 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily CRISPR_Cas2 PF09827.9 gi|452209155|ref|YP_007489269.1| - 7.2e-22 77.4 0.5 8.6e-22 77.1 0.5 1.1 1 0 0 1 1 1 1 CRISPR associated protein Cas2 F-box_5 PF18511.1 gi|452209155|ref|YP_007489269.1| - 0.1 12.2 2.4 8 6.1 0.2 2.3 2 0 0 2 2 2 0 F-box Cas_Cas2CT1978 PF09707.10 gi|452209155|ref|YP_007489269.1| - 0.12 12.5 0.0 0.14 12.2 0.0 1.3 1 1 0 1 1 1 0 CRISPR-associated protein (Cas_Cas2CT1978) Cas_Cas1 PF01867.16 gi|452209156|ref|YP_007489270.1| - 1.3e-73 247.7 0.0 1.5e-73 247.4 0.0 1.0 1 0 0 1 1 1 1 CRISPR associated protein Cas1 DEAD PF00270.29 gi|452209157|ref|YP_007489271.1| - 0.00027 20.8 0.0 0.00028 20.7 0.0 1.0 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 gi|452209157|ref|YP_007489271.1| - 0.0018 18.3 0.0 0.0019 18.2 0.0 1.1 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit PhoH PF02562.16 gi|452209157|ref|YP_007489271.1| - 0.011 15.2 0.0 0.011 15.1 0.0 1.1 1 0 0 1 1 1 0 PhoH-like protein Cas_Cas7 PF05107.12 gi|452209159|ref|YP_007489273.1| - 1.4e-12 47.7 0.1 1.6e-12 47.5 0.1 1.1 1 0 0 1 1 1 1 CRISPR-associated protein Cas7 HTH_24 PF13412.6 gi|452209162|ref|YP_007489276.1| - 7.1e-07 28.7 0.1 1.3e-06 27.9 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|452209162|ref|YP_007489276.1| - 2.3e-06 27.4 0.1 5.1e-06 26.3 0.0 1.7 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.6 gi|452209162|ref|YP_007489276.1| - 4.8e-06 26.5 0.1 1e-05 25.4 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix Cas_APE2256 PF09651.10 gi|452209162|ref|YP_007489276.1| - 5.7e-06 26.3 0.2 1.2e-05 25.2 0.0 1.6 2 0 0 2 2 2 1 CRISPR-associated protein (Cas_APE2256) DUF1887 PF09002.11 gi|452209162|ref|YP_007489276.1| - 3.2e-05 22.8 0.2 4.2e-05 22.4 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1887) TrmB PF01978.19 gi|452209162|ref|YP_007489276.1| - 0.00051 19.9 0.0 0.0018 18.2 0.0 1.9 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB ATP-synt_F PF01990.17 gi|452209162|ref|YP_007489276.1| - 0.003 17.8 1.2 0.0069 16.7 0.5 1.9 1 1 1 2 2 2 1 ATP synthase (F/14-kDa) subunit HTH_20 PF12840.7 gi|452209162|ref|YP_007489276.1| - 0.0064 16.5 0.0 0.012 15.7 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.10 gi|452209162|ref|YP_007489276.1| - 0.012 15.3 0.0 0.022 14.6 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain Cas_Cas02710 PF09670.10 gi|452209162|ref|YP_007489276.1| - 0.027 13.3 0.1 0.036 12.9 0.1 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Cas02710) AAA_14 PF13173.6 gi|452209162|ref|YP_007489276.1| - 0.037 14.1 0.2 0.18 11.9 0.1 1.9 2 0 0 2 2 2 0 AAA domain MarR PF01047.22 gi|452209162|ref|YP_007489276.1| - 0.042 13.8 0.3 0.1 12.5 0.1 1.8 2 0 0 2 2 2 0 MarR family QRPTase_C PF01729.19 gi|452209162|ref|YP_007489276.1| - 0.058 13.2 0.3 0.3 10.8 0.1 1.9 2 0 0 2 2 2 0 Quinolinate phosphoribosyl transferase, C-terminal domain HTH_11 PF08279.12 gi|452209162|ref|YP_007489276.1| - 0.072 13.0 0.1 0.19 11.7 0.1 1.7 1 0 0 1 1 1 0 HTH domain AMIN PF11741.8 gi|452209162|ref|YP_007489276.1| - 0.084 13.0 0.1 0.24 11.6 0.0 1.8 2 1 0 2 2 2 0 AMIN domain Cas_NE0113 PF09623.10 gi|452209162|ref|YP_007489276.1| - 0.093 12.4 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 CRISPR-associated protein NE0113 (Cas_NE0113) ABC_tran PF00005.27 gi|452209165|ref|YP_007489279.1| - 2e-26 93.2 0.0 3e-26 92.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|452209165|ref|YP_007489279.1| - 1.2e-10 41.7 1.0 0.00039 20.3 0.1 2.3 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|452209165|ref|YP_007489279.1| - 1.3e-05 25.5 0.1 5.5e-05 23.5 0.1 1.9 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|452209165|ref|YP_007489279.1| - 2.4e-05 24.2 0.0 0.0083 15.9 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain SMC_N PF02463.19 gi|452209165|ref|YP_007489279.1| - 0.00011 21.7 0.4 0.0012 18.3 0.2 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain DUF815 PF05673.13 gi|452209165|ref|YP_007489279.1| - 0.00048 19.4 0.0 0.00093 18.4 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_29 PF13555.6 gi|452209165|ref|YP_007489279.1| - 0.00053 19.7 1.2 0.00096 18.9 0.3 1.9 2 0 0 2 2 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|452209165|ref|YP_007489279.1| - 0.00088 19.7 0.0 0.0015 18.9 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_24 PF13479.6 gi|452209165|ref|YP_007489279.1| - 0.0029 17.3 0.3 0.075 12.7 0.1 2.2 2 0 0 2 2 2 1 AAA domain MMR_HSR1 PF01926.23 gi|452209165|ref|YP_007489279.1| - 0.0037 17.3 0.0 0.0082 16.2 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 gi|452209165|ref|YP_007489279.1| - 0.004 17.1 0.1 0.0076 16.2 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_30 PF13604.6 gi|452209165|ref|YP_007489279.1| - 0.0043 16.8 0.1 0.67 9.6 0.0 2.2 2 0 0 2 2 2 1 AAA domain DUF87 PF01935.17 gi|452209165|ref|YP_007489279.1| - 0.0048 17.0 0.2 0.012 15.7 0.2 1.6 1 0 0 1 1 1 1 Helicase HerA, central domain AAA_7 PF12775.7 gi|452209165|ref|YP_007489279.1| - 0.0063 16.0 0.0 0.011 15.3 0.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region Rad17 PF03215.15 gi|452209165|ref|YP_007489279.1| - 0.011 15.7 0.1 0.07 13.1 0.0 2.0 2 0 0 2 2 2 0 Rad17 P-loop domain NTPase_1 PF03266.15 gi|452209165|ref|YP_007489279.1| - 0.013 15.4 0.6 2.5 8.0 0.0 2.3 2 0 0 2 2 2 0 NTPase AAA_23 PF13476.6 gi|452209165|ref|YP_007489279.1| - 0.014 16.0 0.9 0.02 15.4 0.3 1.5 2 0 0 2 2 1 0 AAA domain FtsK_SpoIIIE PF01580.18 gi|452209165|ref|YP_007489279.1| - 0.022 14.1 0.1 0.044 13.1 0.1 1.5 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_10 PF12846.7 gi|452209165|ref|YP_007489279.1| - 0.027 13.4 0.1 0.13 11.1 0.0 2.0 2 0 0 2 2 2 0 AAA-like domain KAP_NTPase PF07693.14 gi|452209165|ref|YP_007489279.1| - 0.043 13.0 0.0 0.09 12.0 0.0 1.4 1 1 0 1 1 1 0 KAP family P-loop domain AAA_28 PF13521.6 gi|452209165|ref|YP_007489279.1| - 0.044 14.0 0.1 0.1 12.9 0.1 1.6 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|452209165|ref|YP_007489279.1| - 0.095 12.4 0.1 0.38 10.5 0.0 1.9 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_33 PF13671.6 gi|452209165|ref|YP_007489279.1| - 0.11 12.6 0.1 0.56 10.4 0.1 1.9 2 0 0 2 2 2 0 AAA domain Mg_chelatase PF01078.21 gi|452209165|ref|YP_007489279.1| - 0.11 11.8 0.1 0.33 10.3 0.1 1.8 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI ATP-synt_ab PF00006.25 gi|452209165|ref|YP_007489279.1| - 0.12 12.0 0.1 0.21 11.2 0.0 1.4 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain Cytidylate_kin PF02224.18 gi|452209165|ref|YP_007489279.1| - 0.13 11.9 0.1 0.25 11.0 0.1 1.4 1 0 0 1 1 1 0 Cytidylate kinase AAA_18 PF13238.6 gi|452209165|ref|YP_007489279.1| - 0.14 12.7 0.1 0.34 11.5 0.1 1.8 2 0 0 2 2 2 0 AAA domain Guanylate_kin PF00625.21 gi|452209165|ref|YP_007489279.1| - 0.15 11.7 0.0 1.7 8.3 0.0 2.2 2 0 0 2 2 2 0 Guanylate kinase DUF1638 PF07796.11 gi|452209166|ref|YP_007489280.1| - 1.8e-34 119.2 0.0 2.2e-34 118.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1638) DUF1638 PF07796.11 gi|452209167|ref|YP_007489281.1| - 6.8e-40 136.8 0.1 1.3e-39 135.8 0.1 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF1638) CRM1_repeat_2 PF18784.1 gi|452209167|ref|YP_007489281.1| - 0.58 9.8 2.6 2.7 7.7 0.4 2.3 2 0 0 2 2 2 0 CRM1 / Exportin repeat 2 DUF4921 PF16268.5 gi|452209168|ref|YP_007489282.1| - 1.4e-14 53.8 0.0 9e-06 24.8 0.0 3.0 3 0 0 3 3 3 3 Domain of unknown function (DUF4921) GalP_UDP_transf PF01087.22 gi|452209168|ref|YP_007489282.1| - 5.4e-10 40.0 0.0 8.4e-09 36.1 0.0 2.6 1 1 1 2 2 2 1 Galactose-1-phosphate uridyl transferase, N-terminal domain DUF4931 PF16285.5 gi|452209168|ref|YP_007489282.1| - 0.001 18.4 0.4 0.0063 15.8 0.4 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF4931) HIT PF01230.23 gi|452209168|ref|YP_007489282.1| - 0.034 14.9 0.0 1.3 9.8 0.0 2.2 2 0 0 2 2 2 0 HIT domain GalP_UDP_tr_C PF02744.17 gi|452209168|ref|YP_007489282.1| - 0.062 13.0 0.0 0.11 12.1 0.0 1.4 1 0 0 1 1 1 0 Galactose-1-phosphate uridyl transferase, C-terminal domain Glycos_transf_1 PF00534.20 gi|452209169|ref|YP_007489283.1| - 5.4e-32 110.7 0.0 1.7e-31 109.0 0.0 1.8 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|452209169|ref|YP_007489283.1| - 3.6e-25 89.0 0.0 6.7e-25 88.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|452209169|ref|YP_007489283.1| - 1.5e-21 77.1 0.1 4.4e-21 75.6 0.1 1.8 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|452209169|ref|YP_007489283.1| - 2.8e-18 66.9 0.0 4.5e-18 66.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|452209169|ref|YP_007489283.1| - 3.3e-09 36.9 0.0 6.3e-09 36.0 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_transf_5 PF08323.11 gi|452209169|ref|YP_007489283.1| - 1.2e-08 35.0 0.1 1.2e-06 28.4 0.0 2.2 1 1 0 2 2 2 1 Starch synthase catalytic domain Glyco_trans_1_2 PF13524.6 gi|452209169|ref|YP_007489283.1| - 0.0026 18.1 0.0 0.006 17.0 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 DUF2150 PF09920.9 gi|452209170|ref|YP_007489284.1| - 2.3e-71 239.7 5.2 2.8e-71 239.4 5.2 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2150) UPF0179 PF03684.13 gi|452209171|ref|YP_007489285.1| - 1.1e-52 177.6 4.6 1.3e-52 177.4 4.6 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0179) GCSF PF16647.5 gi|452209171|ref|YP_007489285.1| - 0.18 11.6 0.2 0.28 11.0 0.2 1.3 1 0 0 1 1 1 0 Granulocyte colony-stimulating factor Fe-ADH_2 PF13685.6 gi|452209172|ref|YP_007489286.1| - 6.7e-78 261.8 1.8 8.2e-78 261.5 1.8 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.19 gi|452209172|ref|YP_007489286.1| - 1.9e-26 92.8 5.5 4.2e-25 88.3 5.5 2.0 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.20 gi|452209172|ref|YP_007489286.1| - 7.7e-09 35.1 0.2 3.9e-08 32.8 0.2 1.9 1 1 0 1 1 1 1 3-dehydroquinate synthase AIRC PF00731.20 gi|452209172|ref|YP_007489286.1| - 0.0024 17.4 0.3 0.006 16.2 0.3 1.7 1 1 0 1 1 1 1 AIR carboxylase DUF63 PF01889.17 gi|452209173|ref|YP_007489287.1| - 6.9e-102 341.3 12.5 7.7e-102 341.1 12.5 1.0 1 0 0 1 1 1 1 Membrane protein of unknown function DUF63 SpoIIM PF01944.17 gi|452209174|ref|YP_007489288.1| - 1.6e-33 115.9 19.6 2.1e-33 115.6 19.6 1.1 1 0 0 1 1 1 1 Stage II sporulation protein M DUF1297 PF06973.12 gi|452209176|ref|YP_007489290.1| - 9e-78 260.1 0.0 1.2e-77 259.7 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.12 gi|452209176|ref|YP_007489290.1| - 1.8e-44 150.6 0.0 2.8e-44 150.0 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) GTP_EFTU PF00009.27 gi|452209177|ref|YP_007489291.1| - 2.5e-32 112.0 1.4 9.9e-32 110.1 1.4 1.8 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain eIF2_C PF09173.11 gi|452209177|ref|YP_007489291.1| - 4.6e-31 106.9 0.8 1.1e-30 105.7 0.8 1.7 1 0 0 1 1 1 1 Initiation factor eIF2 gamma, C terminal GTP_EFTU_D2 PF03144.25 gi|452209177|ref|YP_007489291.1| - 4.7e-08 33.3 0.4 1.7e-07 31.5 0.4 2.0 1 0 0 1 1 1 1 Elongation factor Tu domain 2 RsgA_GTPase PF03193.16 gi|452209177|ref|YP_007489291.1| - 1e-05 25.5 0.9 0.00016 21.7 0.2 2.3 2 0 0 2 2 2 1 RsgA GTPase MMR_HSR1 PF01926.23 gi|452209177|ref|YP_007489291.1| - 0.00038 20.5 0.0 0.0024 17.9 0.0 2.3 2 1 0 2 2 2 1 50S ribosome-binding GTPase Nop10p PF04135.12 gi|452209177|ref|YP_007489291.1| - 0.0021 18.1 2.8 0.0044 17.0 2.8 1.4 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family MMR_HSR1_Xtn PF16897.5 gi|452209177|ref|YP_007489291.1| - 0.0036 17.3 0.1 0.0086 16.1 0.1 1.7 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain PduV-EutP PF10662.9 gi|452209177|ref|YP_007489291.1| - 0.0043 16.8 3.0 1.9 8.2 0.7 2.8 3 0 0 3 3 3 2 Ethanolamine utilisation - propanediol utilisation FeoB_N PF02421.18 gi|452209177|ref|YP_007489291.1| - 0.0073 15.9 1.7 1 8.9 0.7 2.9 2 1 0 2 2 2 1 Ferrous iron transport protein B PolC_DP2 PF03833.13 gi|452209177|ref|YP_007489291.1| - 0.027 12.4 0.3 0.036 11.9 0.3 1.1 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 TF_Zn_Ribbon PF08271.12 gi|452209177|ref|YP_007489291.1| - 3.4 7.3 8.6 9.1 5.9 8.6 1.7 1 1 0 1 1 1 0 TFIIB zinc-binding PIN_9 PF18477.1 gi|452209178|ref|YP_007489292.1| - 5e-43 146.1 0.0 5.6e-43 145.9 0.0 1.0 1 0 0 1 1 1 1 PIN like domain PIN_5 PF08745.11 gi|452209178|ref|YP_007489292.1| - 4.2e-06 26.3 0.4 0.0036 16.8 0.1 2.1 1 1 1 2 2 2 2 PINc domain ribonuclease PIN PF01850.21 gi|452209178|ref|YP_007489292.1| - 0.0017 18.9 0.1 1.7 9.1 0.0 2.1 1 1 1 2 2 2 2 PIN domain PIN_4 PF13638.6 gi|452209178|ref|YP_007489292.1| - 0.016 15.5 0.1 0.18 12.1 0.0 2.0 1 1 1 2 2 2 0 PIN domain DUF5615 PF18480.1 gi|452209178|ref|YP_007489292.1| - 0.071 12.9 0.0 0.31 10.8 0.0 2.1 2 2 0 2 2 2 0 Domain of unknown function (DUF5615) DUF188 PF02639.14 gi|452209178|ref|YP_007489292.1| - 0.11 12.2 0.0 0.14 11.8 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized BCR, YaiI/YqxD family COG1671 MA3 PF02847.17 gi|452209178|ref|YP_007489292.1| - 0.15 12.1 0.0 0.22 11.5 0.0 1.2 1 0 0 1 1 1 0 MA3 domain SHS2_Rpb7-N PF03876.17 gi|452209179|ref|YP_007489293.1| - 1.5e-19 70.1 0.2 3.8e-19 68.8 0.1 1.7 2 0 0 2 2 2 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 S1 PF00575.23 gi|452209179|ref|YP_007489293.1| - 1.2e-10 41.6 0.2 2e-10 40.8 0.2 1.4 1 0 0 1 1 1 1 S1 RNA binding domain RNA_pol_Rbc25 PF08292.12 gi|452209179|ref|YP_007489293.1| - 0.027 14.7 0.0 0.052 13.8 0.0 1.5 1 0 0 1 1 1 0 RNA polymerase III subunit Rpc25 Spt4 PF06093.13 gi|452209180|ref|YP_007489294.1| - 3.9e-13 49.3 0.0 4.7e-13 49.0 0.0 1.1 1 0 0 1 1 1 1 Spt4/RpoE2 zinc finger Prok-RING_4 PF14447.6 gi|452209180|ref|YP_007489294.1| - 0.0019 18.0 0.8 0.0025 17.6 0.8 1.2 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 TF_Zn_Ribbon PF08271.12 gi|452209180|ref|YP_007489294.1| - 0.031 13.8 0.5 0.089 12.3 0.0 1.9 2 0 0 2 2 2 0 TFIIB zinc-binding DZR PF12773.7 gi|452209180|ref|YP_007489294.1| - 0.039 14.0 0.6 0.052 13.6 0.6 1.2 1 0 0 1 1 1 0 Double zinc ribbon zf-C3HC4_3 PF13920.6 gi|452209180|ref|YP_007489294.1| - 0.049 13.5 2.0 0.073 13.0 2.0 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Rad50_zn_hook PF04423.14 gi|452209180|ref|YP_007489294.1| - 0.077 12.9 0.3 1.3 8.9 0.2 2.2 2 0 0 2 2 2 0 Rad50 zinc hook motif zf-ribbon_3 PF13248.6 gi|452209180|ref|YP_007489294.1| - 0.087 12.3 2.5 0.42 10.1 0.1 2.1 2 0 0 2 2 2 0 zinc-ribbon domain zf-RING_5 PF14634.6 gi|452209180|ref|YP_007489294.1| - 0.092 12.7 2.1 0.12 12.4 2.1 1.2 1 0 0 1 1 1 0 zinc-RING finger domain NHL PF01436.21 gi|452209180|ref|YP_007489294.1| - 0.11 12.6 0.0 1.3 9.2 0.0 2.2 2 0 0 2 2 2 0 NHL repeat DUF35_N PF12172.8 gi|452209180|ref|YP_007489294.1| - 0.12 12.2 5.1 0.49 10.3 0.2 2.2 1 1 1 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) YhfH PF14149.6 gi|452209180|ref|YP_007489294.1| - 1.3 9.1 5.0 8.7 6.4 0.6 2.3 1 1 1 2 2 2 0 YhfH-like protein Prim_Zn_Ribbon PF08273.12 gi|452209180|ref|YP_007489294.1| - 1.7 9.0 6.6 1.2 9.5 0.8 2.2 1 1 1 2 2 2 0 Zinc-binding domain of primase-helicase DUF2256 PF10013.9 gi|452209180|ref|YP_007489294.1| - 4.1 7.6 6.4 3.8 7.7 0.4 2.3 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) DUF359 PF04019.12 gi|452209181|ref|YP_007489295.1| - 1.1e-43 147.9 0.0 1.4e-43 147.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF359) Ribosomal_S24e PF01282.19 gi|452209182|ref|YP_007489296.1| - 1e-25 89.5 0.1 1.3e-25 89.1 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S24e Ribosomal_S4 PF00163.19 gi|452209182|ref|YP_007489296.1| - 0.11 13.4 0.7 0.15 13.0 0.7 1.5 1 1 0 1 1 1 0 Ribosomal protein S4/S9 N-terminal domain Ribosomal_S27 PF01599.19 gi|452209183|ref|YP_007489297.1| - 1.6e-21 76.2 2.7 1.8e-21 76.0 2.7 1.0 1 0 0 1 1 1 1 Ribosomal protein S27a Nudix_N_2 PF14803.6 gi|452209183|ref|YP_007489297.1| - 0.00016 21.5 4.4 0.0019 18.1 4.5 2.3 2 1 0 2 2 2 1 Nudix N-terminal Ribosomal_L37e PF01907.19 gi|452209183|ref|YP_007489297.1| - 0.0016 18.6 1.0 0.0018 18.4 1.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L37e GFA PF04828.14 gi|452209183|ref|YP_007489297.1| - 0.019 15.3 0.9 0.13 12.6 0.0 1.9 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme RNA_POL_M_15KD PF02150.16 gi|452209183|ref|YP_007489297.1| - 0.023 14.6 6.2 0.3 11.0 6.2 2.0 1 1 0 1 1 1 0 RNA polymerases M/15 Kd subunit zf-ribbon_3 PF13248.6 gi|452209183|ref|YP_007489297.1| - 0.024 14.0 2.0 0.76 9.3 0.0 2.1 2 0 0 2 2 2 0 zinc-ribbon domain DUF1451 PF07295.11 gi|452209183|ref|YP_007489297.1| - 0.039 14.0 0.4 0.041 13.9 0.4 1.0 1 0 0 1 1 1 0 Zinc-ribbon containing domain TF_Zn_Ribbon PF08271.12 gi|452209183|ref|YP_007489297.1| - 0.064 12.8 1.3 0.1 12.2 1.3 1.4 1 0 0 1 1 1 0 TFIIB zinc-binding MqsA_antitoxin PF15731.5 gi|452209183|ref|YP_007489297.1| - 0.068 13.3 0.1 0.077 13.1 0.1 1.2 1 0 0 1 1 1 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA DZR PF12773.7 gi|452209183|ref|YP_007489297.1| - 0.069 13.2 2.4 0.14 12.2 2.4 1.5 1 1 0 1 1 1 0 Double zinc ribbon NOB1_Zn_bind PF08772.11 gi|452209183|ref|YP_007489297.1| - 0.17 12.1 5.5 0.4 10.9 0.5 2.0 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like zinc_ribbon_2 PF13240.6 gi|452209183|ref|YP_007489297.1| - 0.27 11.0 7.5 1.4 8.7 1.5 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-NADH-PPase PF09297.11 gi|452209183|ref|YP_007489297.1| - 0.32 10.7 9.2 3.7 7.3 9.2 2.1 1 1 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain TPR_2 PF07719.17 gi|452209187|ref|YP_007489301.1| - 4.8e-90 288.6 71.3 1e-07 31.5 0.2 21.8 21 1 1 22 22 22 18 Tetratricopeptide repeat TPR_1 PF00515.28 gi|452209187|ref|YP_007489301.1| - 1.6e-89 290.3 64.2 7.6e-08 31.9 0.2 20.9 22 1 1 23 23 22 15 Tetratricopeptide repeat TPR_16 PF13432.6 gi|452209187|ref|YP_007489301.1| - 4.5e-57 190.4 46.6 2.1e-07 31.5 0.1 14.9 9 3 4 15 15 15 12 Tetratricopeptide repeat TPR_11 PF13414.6 gi|452209187|ref|YP_007489301.1| - 1.3e-52 175.2 51.5 6e-06 25.8 0.2 19.3 13 5 8 21 21 20 11 TPR repeat TPR_8 PF13181.6 gi|452209187|ref|YP_007489301.1| - 2.3e-49 161.5 59.2 7.1e-05 22.7 0.1 20.6 21 0 0 21 21 20 10 Tetratricopeptide repeat TPR_19 PF14559.6 gi|452209187|ref|YP_007489301.1| - 9.1e-49 163.8 37.7 2.9e-09 37.3 0.1 14.2 11 3 1 14 14 14 9 Tetratricopeptide repeat TPR_12 PF13424.6 gi|452209187|ref|YP_007489301.1| - 1.1e-48 163.4 47.4 2.6e-09 37.2 0.8 14.3 7 2 7 14 14 14 12 Tetratricopeptide repeat TPR_14 PF13428.6 gi|452209187|ref|YP_007489301.1| - 2.6e-47 155.4 45.7 0.00035 21.1 0.2 19.3 7 6 12 19 19 19 9 Tetratricopeptide repeat TPR_17 PF13431.6 gi|452209187|ref|YP_007489301.1| - 5.6e-40 132.9 30.2 0.0012 19.1 0.1 19.8 19 1 1 20 20 20 6 Tetratricopeptide repeat TPR_9 PF13371.6 gi|452209187|ref|YP_007489301.1| - 7.5e-35 118.9 17.0 9.5e-06 25.7 0.0 12.2 9 3 1 12 12 12 7 Tetratricopeptide repeat TPR_7 PF13176.6 gi|452209187|ref|YP_007489301.1| - 1.4e-32 109.3 38.6 0.0021 17.9 0.1 17.9 18 1 1 19 19 18 8 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|452209187|ref|YP_007489301.1| - 2.3e-27 95.0 43.0 2.9e-05 24.2 2.9 11.5 6 3 10 16 16 15 11 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 gi|452209187|ref|YP_007489301.1| - 1.3e-17 63.2 53.9 0.06 14.0 0.1 17.6 21 0 0 21 21 14 4 Tetratricopeptide repeat TPR_10 PF13374.6 gi|452209187|ref|YP_007489301.1| - 3.3e-17 61.8 39.6 0.054 13.4 0.0 15.2 16 0 0 16 16 15 5 Tetratricopeptide repeat NARP1 PF12569.8 gi|452209187|ref|YP_007489301.1| - 5.4e-15 55.3 5.8 0.078 11.9 1.1 8.2 3 2 3 7 7 7 4 NMDA receptor-regulated protein 1 TPR_15 PF13429.6 gi|452209187|ref|YP_007489301.1| - 4e-13 49.2 13.8 0.0031 16.8 0.0 7.5 3 2 4 7 7 7 4 Tetratricopeptide repeat SRP_TPR_like PF17004.5 gi|452209187|ref|YP_007489301.1| - 8.4e-09 35.5 17.5 0.25 11.3 0.0 8.8 4 2 4 9 9 9 2 Putative TPR-like repeat TPR_20 PF14561.6 gi|452209187|ref|YP_007489301.1| - 4.4e-08 33.4 11.0 0.36 11.2 0.0 8.1 4 3 4 10 10 8 3 Tetratricopeptide repeat BTAD PF03704.17 gi|452209187|ref|YP_007489301.1| - 9.3e-08 32.6 22.4 0.029 14.8 0.2 8.9 5 3 4 10 10 10 2 Bacterial transcriptional activator domain TPR_MalT PF17874.1 gi|452209187|ref|YP_007489301.1| - 1.4e-07 31.3 3.2 0.0015 18.0 0.1 5.0 5 1 0 5 5 5 1 MalT-like TPR region Fis1_TPR_C PF14853.6 gi|452209187|ref|YP_007489301.1| - 1.5e-07 31.4 36.7 2.7 8.1 1.1 13.4 13 2 3 16 16 15 2 Fis1 C-terminal tetratricopeptide repeat RPN7 PF10602.9 gi|452209187|ref|YP_007489301.1| - 7.6e-07 29.0 20.1 2.2 7.9 0.1 9.8 3 2 5 8 8 8 1 26S proteasome subunit RPN7 PPTA PF01239.22 gi|452209187|ref|YP_007489301.1| - 1.2e-06 28.0 2.5 0.097 12.4 0.0 5.8 6 0 0 6 6 5 1 Protein prenyltransferase alpha subunit repeat DUF3856 PF12968.7 gi|452209187|ref|YP_007489301.1| - 4.1e-06 26.9 23.3 1.5 8.9 0.3 10.5 5 3 2 9 9 9 2 Domain of Unknown Function (DUF3856) TPR_21 PF09976.9 gi|452209187|ref|YP_007489301.1| - 2.3e-05 24.2 20.7 0.12 12.1 0.3 7.6 7 3 1 8 8 7 3 Tetratricopeptide repeat-like domain TPR_4 PF07721.14 gi|452209187|ref|YP_007489301.1| - 0.00028 21.2 15.3 44 5.1 0.0 9.7 11 0 0 11 11 7 0 Tetratricopeptide repeat Rapsyn_N PF10579.9 gi|452209187|ref|YP_007489301.1| - 0.0011 19.0 1.0 1.5 9.0 0.0 5.6 6 0 0 6 6 5 1 Rapsyn N-terminal myristoylation and linker region DUF627 PF04781.12 gi|452209187|ref|YP_007489301.1| - 0.0035 17.4 6.7 63 3.6 0.0 7.7 7 3 2 9 9 9 0 Protein of unknown function (DUF627) Alkyl_sulf_dimr PF14863.6 gi|452209187|ref|YP_007489301.1| - 0.0051 17.3 0.3 54 4.2 0.0 5.5 5 1 0 6 6 6 0 Alkyl sulfatase dimerisation TPR_3 PF07720.12 gi|452209187|ref|YP_007489301.1| - 0.0065 16.4 27.5 6.6 6.8 0.0 9.6 10 0 0 10 10 9 0 Tetratricopeptide repeat HrpB1_HrpK PF09613.10 gi|452209187|ref|YP_007489301.1| - 0.02 14.5 0.0 15 5.3 0.0 4.0 3 0 0 3 3 3 0 Bacterial type III secretion protein (HrpB1_HrpK) Paf67 PF10255.9 gi|452209187|ref|YP_007489301.1| - 0.031 13.3 0.7 8.2 5.3 0.0 4.3 4 1 0 4 4 4 0 RNA polymerase I-associated factor PAF67 Phage-MuB_C PF09077.11 gi|452209187|ref|YP_007489301.1| - 0.086 12.7 0.5 44 4.1 0.0 3.8 2 1 1 3 3 3 0 Mu B transposition protein, C terminal FAT PF02259.23 gi|452209187|ref|YP_007489301.1| - 0.12 11.6 0.7 8.1 5.5 0.0 3.7 3 1 0 3 3 3 0 FAT domain Cohesin_load PF10345.9 gi|452209187|ref|YP_007489301.1| - 0.14 10.6 0.3 3.3 6.0 0.0 2.3 2 0 0 2 2 2 0 Cohesin loading factor PknG_TPR PF16918.5 gi|452209187|ref|YP_007489301.1| - 0.5 9.0 2.1 53 2.4 0.0 4.1 5 1 0 5 5 5 0 Protein kinase G tetratricopeptide repeat PPR PF01535.20 gi|452209187|ref|YP_007489301.1| - 1.1 9.6 33.8 1.9 8.9 0.1 11.6 13 0 0 13 13 10 0 PPR repeat NRBF2_MIT PF17169.4 gi|452209187|ref|YP_007489301.1| - 2.7 8.3 14.2 58 4.0 0.0 6.7 7 1 1 8 8 5 0 MIT domain of nuclear receptor-binding factor 2 Peptidase_M22 PF00814.25 gi|452209188|ref|YP_007489302.1| - 2.7e-89 299.5 0.1 3.4e-89 299.1 0.1 1.1 1 0 0 1 1 1 1 Glycoprotease family RIO1 PF01163.22 gi|452209188|ref|YP_007489302.1| - 2.6e-08 33.7 0.0 4.8e-08 32.8 0.0 1.4 1 0 0 1 1 1 1 RIO1 family APH PF01636.23 gi|452209188|ref|YP_007489302.1| - 1.4e-07 31.7 0.3 0.0011 19.0 0.0 2.3 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kdo PF06293.14 gi|452209188|ref|YP_007489302.1| - 1.9e-06 27.4 0.0 0.0001 21.7 0.0 2.3 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase PF00069.25 gi|452209188|ref|YP_007489302.1| - 4.7e-05 22.9 0.0 9.1e-05 21.9 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain Carbam_trans_N PF02543.15 gi|452209188|ref|YP_007489302.1| - 0.0013 18.5 0.0 0.023 14.4 0.0 2.2 2 0 0 2 2 2 1 Carbamoyltransferase N-terminus Pkinase_Tyr PF07714.17 gi|452209188|ref|YP_007489302.1| - 0.047 13.0 0.0 0.078 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein tyrosine kinase Thioredoxin_6 PF13848.6 gi|452209188|ref|YP_007489302.1| - 0.084 12.8 0.0 0.5 10.3 0.0 2.1 2 0 0 2 2 2 0 Thioredoxin-like domain B12-binding PF02310.19 gi|452209188|ref|YP_007489302.1| - 0.091 12.8 0.1 3.9 7.5 0.0 3.0 3 0 0 3 3 3 0 B12 binding domain Ham1p_like PF01725.16 gi|452209189|ref|YP_007489303.1| - 3e-54 183.8 0.0 3.4e-54 183.6 0.0 1.0 1 0 0 1 1 1 1 Ham1 family DUF4224 PF13986.6 gi|452209189|ref|YP_007489303.1| - 0.11 12.4 0.0 0.62 10.0 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4224) TatC PF00902.18 gi|452209191|ref|YP_007489305.1| - 0.007 16.2 0.1 0.0095 15.8 0.1 1.2 1 0 0 1 1 1 1 Sec-independent protein translocase protein (TatC) Cyclase PF04199.13 gi|452209192|ref|YP_007489306.1| - 3.3e-23 82.4 0.0 4.3e-23 82.0 0.0 1.2 1 0 0 1 1 1 1 Putative cyclase Fer4 PF00037.27 gi|452209193|ref|YP_007489307.1| - 2.2e-10 39.9 14.9 1.2e-05 25.0 4.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|452209193|ref|YP_007489307.1| - 1.6e-07 31.0 12.0 0.0019 18.2 3.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|452209193|ref|YP_007489307.1| - 1.6e-07 31.3 10.8 2.4e-07 30.8 10.8 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452209193|ref|YP_007489307.1| - 2.5e-07 30.7 21.4 6.9e-05 22.9 13.1 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452209193|ref|YP_007489307.1| - 1.5e-06 29.1 11.4 1.7e-05 25.6 3.7 2.1 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 gi|452209193|ref|YP_007489307.1| - 1.1e-05 25.2 15.9 0.0016 18.4 3.1 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|452209193|ref|YP_007489307.1| - 3.1e-05 24.5 12.5 0.00011 22.8 12.7 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|452209193|ref|YP_007489307.1| - 4.3e-05 23.7 13.8 0.0043 17.4 2.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|452209193|ref|YP_007489307.1| - 6.3e-05 23.4 9.1 0.007 16.9 1.0 2.2 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|452209193|ref|YP_007489307.1| - 0.00014 22.2 12.1 0.0019 18.6 1.0 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|452209193|ref|YP_007489307.1| - 0.00017 21.7 10.4 0.023 14.8 0.5 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|452209193|ref|YP_007489307.1| - 0.006 16.8 5.1 0.0082 16.3 5.1 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|452209193|ref|YP_007489307.1| - 0.029 15.3 16.1 0.036 15.0 5.5 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 gi|452209193|ref|YP_007489307.1| - 1.1 9.8 11.2 0.9 10.1 0.7 2.2 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|452209193|ref|YP_007489307.1| - 6.9 7.5 11.5 1.4 9.7 1.8 2.4 2 1 0 2 2 2 0 4Fe-4S single cluster domain Radical_SAM PF04055.21 gi|452209194|ref|YP_007489308.1| - 1.3e-08 35.4 0.1 8e-08 32.8 0.0 2.2 3 0 0 3 3 3 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|452209194|ref|YP_007489308.1| - 7.3e-05 22.9 0.0 0.00015 21.9 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|452209194|ref|YP_007489308.1| - 0.0026 18.0 0.1 0.0059 16.9 0.1 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain YdjM PF04307.14 gi|452209195|ref|YP_007489309.1| - 7.2e-10 38.4 9.1 1.1e-09 37.9 9.1 1.2 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase Man-6-P_recep PF02157.15 gi|452209195|ref|YP_007489309.1| - 0.64 9.1 3.2 8 5.5 0.1 2.3 2 0 0 2 2 2 0 Mannose-6-phosphate receptor Form-deh_trans PF09163.11 gi|452209195|ref|YP_007489309.1| - 3.2 7.6 5.3 0.49 10.2 0.2 2.3 2 0 0 2 2 2 0 Formate dehydrogenase N, transmembrane Hexapep PF00132.24 gi|452209196|ref|YP_007489310.1| - 5.8e-08 32.2 12.8 2.7e-05 23.7 7.5 3.3 3 0 0 3 3 3 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|452209196|ref|YP_007489310.1| - 0.00015 21.4 17.5 0.02 14.6 10.4 3.8 3 1 1 4 4 4 4 Hexapeptide repeat of succinyl-transferase DUF362 PF04015.12 gi|452209197|ref|YP_007489311.1| - 3.1e-40 138.6 0.0 5.7e-38 131.2 0.0 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF362) Fer4 PF00037.27 gi|452209197|ref|YP_007489311.1| - 8.3e-09 34.9 14.4 4.1e-05 23.2 6.0 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|452209197|ref|YP_007489311.1| - 6.9e-06 25.9 14.8 0.01 15.9 5.1 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|452209197|ref|YP_007489311.1| - 0.00014 22.4 15.3 0.00034 21.2 15.3 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452209197|ref|YP_007489311.1| - 0.00016 21.8 16.2 0.00029 20.9 16.2 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|452209197|ref|YP_007489311.1| - 0.00021 21.2 14.8 0.00053 19.9 1.8 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|452209197|ref|YP_007489311.1| - 0.00032 20.7 14.8 0.00068 19.7 14.8 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|452209197|ref|YP_007489311.1| - 0.00059 19.9 14.8 0.0011 19.0 14.8 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452209197|ref|YP_007489311.1| - 0.15 13.0 15.3 0.73 10.8 2.4 2.5 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|452209197|ref|YP_007489311.1| - 1 10.0 16.4 2.6 8.8 6.0 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|452209197|ref|YP_007489311.1| - 3.2 8.0 12.1 0.43 10.8 2.2 2.6 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|452209197|ref|YP_007489311.1| - 4 8.1 18.4 11 6.6 7.9 2.4 1 1 2 3 3 3 0 4Fe-4S dicluster domain ETF_QO PF05187.13 gi|452209197|ref|YP_007489311.1| - 5.4 7.2 10.9 15 5.7 10.9 1.7 1 1 0 1 1 1 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_8 PF13183.6 gi|452209197|ref|YP_007489311.1| - 7.3 7.1 18.1 8.4 6.9 6.4 2.4 1 1 2 3 3 3 0 4Fe-4S dicluster domain NAD_synthase PF02540.17 gi|452209198|ref|YP_007489312.1| - 5.7e-55 186.1 0.1 6e-33 114.0 0.0 2.1 2 0 0 2 2 2 2 NAD synthase QueC PF06508.13 gi|452209198|ref|YP_007489312.1| - 0.0046 16.5 0.0 0.18 11.3 0.0 2.2 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.16 gi|452209198|ref|YP_007489312.1| - 0.0097 14.7 0.0 0.025 13.4 0.0 1.6 2 0 0 2 2 2 1 tRNA methyl transferase tRNA_Me_trans PF03054.16 gi|452209199|ref|YP_007489313.1| - 0.0011 17.9 0.2 0.0021 16.9 0.1 1.6 1 1 1 2 2 2 1 tRNA methyl transferase Asn_synthase PF00733.21 gi|452209199|ref|YP_007489313.1| - 0.017 14.8 0.0 0.025 14.2 0.0 1.1 1 0 0 1 1 1 0 Asparagine synthase QueC PF06508.13 gi|452209199|ref|YP_007489313.1| - 0.019 14.4 0.0 0.034 13.6 0.0 1.4 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC Diphthami_syn_2 PF01902.17 gi|452209199|ref|YP_007489313.1| - 0.068 12.7 0.0 0.12 11.8 0.0 1.4 1 0 0 1 1 1 0 Diphthamide synthase NAD_synthase PF02540.17 gi|452209199|ref|YP_007489313.1| - 0.084 12.0 0.0 0.11 11.6 0.0 1.2 1 0 0 1 1 1 0 NAD synthase AMP-binding PF00501.28 gi|452209200|ref|YP_007489314.1| - 3.1e-74 250.1 0.0 3.7e-74 249.8 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|452209200|ref|YP_007489314.1| - 5.5e-10 40.1 0.0 1.1e-09 39.2 0.0 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain PP-binding PF00550.25 gi|452209201|ref|YP_007489315.1| - 2.4e-06 27.8 0.2 2.8e-06 27.6 0.2 1.2 1 0 0 1 1 1 1 Phosphopantetheine attachment site DUF2551 PF10826.8 gi|452209202|ref|YP_007489316.1| - 5.5e-31 106.6 0.5 6.2e-31 106.5 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2551) FUR PF01475.19 gi|452209202|ref|YP_007489316.1| - 0.049 13.8 0.0 0.06 13.5 0.0 1.0 1 0 0 1 1 1 0 Ferric uptake regulator family Prenyltransf PF01255.19 gi|452209203|ref|YP_007489317.1| - 6.8e-72 241.6 0.0 8.5e-72 241.3 0.0 1.1 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase DUF881 PF05949.12 gi|452209203|ref|YP_007489317.1| - 0.11 12.4 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF881) Thioredox_DsbH PF03190.15 gi|452209206|ref|YP_007489320.1| - 2.3e-62 209.8 0.2 5.8e-62 208.4 0.2 1.7 1 1 0 1 1 1 1 Protein of unknown function, DUF255 C5-epim_C PF06662.13 gi|452209206|ref|YP_007489320.1| - 1.7e-05 24.4 0.6 0.012 15.2 0.0 2.7 2 0 0 2 2 2 2 D-glucuronyl C5-epimerase C-terminus GlcNAc_2-epim PF07221.11 gi|452209206|ref|YP_007489320.1| - 0.00013 21.3 0.0 0.025 13.8 0.0 2.8 3 0 0 3 3 3 1 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) LANC_like PF05147.13 gi|452209206|ref|YP_007489320.1| - 0.0064 15.1 0.0 0.24 9.9 0.0 2.6 2 0 0 2 2 2 1 Lanthionine synthetase C-like protein Glyco_hydro_76 PF03663.14 gi|452209206|ref|YP_007489320.1| - 0.0092 15.5 0.1 2.5 7.5 0.0 2.9 2 1 0 2 2 2 1 Glycosyl hydrolase family 76 Pec_lyase PF09492.10 gi|452209206|ref|YP_007489320.1| - 0.019 14.3 0.4 0.24 10.7 0.0 2.4 2 0 0 2 2 2 0 Pectic acid lyase Glyco_hydro_88 PF07470.13 gi|452209206|ref|YP_007489320.1| - 0.021 13.9 0.8 3.4 6.7 0.1 2.9 3 0 0 3 3 3 0 Glycosyl Hydrolase Family 88 cwf21 PF08312.12 gi|452209206|ref|YP_007489320.1| - 0.098 12.8 0.1 0.098 12.8 0.1 2.2 2 0 0 2 2 2 0 cwf21 domain HNOB PF07700.15 gi|452209206|ref|YP_007489320.1| - 0.098 12.6 0.2 1.8 8.5 0.0 2.5 2 0 0 2 2 2 0 Haem-NO-binding Cyt-b5 PF00173.28 gi|452209207|ref|YP_007489321.1| - 7.5e-12 45.2 0.3 9.3e-12 44.9 0.3 1.1 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Putative_PNPOx PF01243.20 gi|452209208|ref|YP_007489322.1| - 1.8e-14 53.7 0.0 8.1e-14 51.6 0.0 1.8 2 0 0 2 2 2 1 Pyridoxamine 5'-phosphate oxidase Pyrid_oxidase_2 PF13883.6 gi|452209208|ref|YP_007489322.1| - 1.2e-07 31.8 0.0 1.5e-07 31.5 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_ox_2 PF12900.7 gi|452209208|ref|YP_007489322.1| - 0.00099 19.1 0.0 0.0015 18.5 0.0 1.4 1 1 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Hpr_kinase_N PF02603.16 gi|452209208|ref|YP_007489322.1| - 0.04 13.9 0.0 0.073 13.1 0.0 1.4 1 0 0 1 1 1 0 HPr Serine kinase N terminus Pyrid_ox_like PF16242.5 gi|452209208|ref|YP_007489322.1| - 0.083 12.5 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase like HTH_33 PF13592.6 gi|452209209|ref|YP_007489323.1| - 4.7e-10 39.0 0.0 5.9e-10 38.6 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn helix HTH_32 PF13565.6 gi|452209209|ref|YP_007489323.1| - 0.18 12.5 0.0 0.28 11.8 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain DUF2500 PF10694.9 gi|452209210|ref|YP_007489324.1| - 0.063 13.8 0.1 0.14 12.7 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2500) AAA_18 PF13238.6 gi|452209212|ref|YP_007489326.1| - 9.8e-26 90.8 1.5 1.5e-25 90.2 1.5 1.3 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|452209212|ref|YP_007489326.1| - 8.7e-07 29.4 0.6 1.3e-06 28.8 0.6 1.3 1 0 0 1 1 1 1 AAA domain dNK PF01712.19 gi|452209212|ref|YP_007489326.1| - 3e-05 24.0 1.4 0.075 12.9 0.2 2.2 1 1 0 2 2 2 2 Deoxynucleoside kinase AAA_28 PF13521.6 gi|452209212|ref|YP_007489326.1| - 3.4e-05 24.1 0.2 6.9e-05 23.1 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|452209212|ref|YP_007489326.1| - 0.00021 21.5 0.0 0.0019 18.3 0.0 2.1 1 1 0 1 1 1 1 AAA domain CoaE PF01121.20 gi|452209212|ref|YP_007489326.1| - 0.0004 20.1 0.0 0.04 13.6 0.0 2.2 2 0 0 2 2 2 1 Dephospho-CoA kinase AAA_5 PF07728.14 gi|452209212|ref|YP_007489326.1| - 0.0049 16.9 0.2 0.02 14.9 0.1 1.9 1 1 0 2 2 2 1 AAA domain (dynein-related subfamily) Zeta_toxin PF06414.12 gi|452209212|ref|YP_007489326.1| - 0.011 15.0 0.0 0.022 14.1 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin UPF0180 PF03698.13 gi|452209212|ref|YP_007489326.1| - 0.011 15.8 0.6 0.78 10.0 0.1 3.2 2 2 0 2 2 2 0 Uncharacterised protein family (UPF0180) AAA PF00004.29 gi|452209212|ref|YP_007489326.1| - 0.021 15.2 0.1 0.045 14.2 0.1 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) PRK PF00485.18 gi|452209212|ref|YP_007489326.1| - 0.026 14.2 0.1 0.1 12.3 0.1 2.1 1 1 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_22 PF13401.6 gi|452209212|ref|YP_007489326.1| - 0.08 13.2 0.5 0.18 12.1 0.5 1.9 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|452209212|ref|YP_007489326.1| - 0.09 13.1 0.2 0.13 12.6 0.2 1.5 1 1 0 1 1 1 0 AAA ATPase domain KTI12 PF08433.10 gi|452209212|ref|YP_007489326.1| - 0.1 12.0 0.1 0.19 11.2 0.0 1.4 1 1 0 1 1 1 0 Chromatin associated protein KTI12 MeaB PF03308.16 gi|452209212|ref|YP_007489326.1| - 0.12 11.3 0.4 0.25 10.3 0.1 1.6 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB ADK PF00406.22 gi|452209212|ref|YP_007489326.1| - 0.13 12.3 0.1 0.4 10.8 0.1 1.9 1 1 0 1 1 1 0 Adenylate kinase CTP_transf_like PF01467.26 gi|452209213|ref|YP_007489327.1| - 3.3e-14 53.3 0.2 1.1e-13 51.6 0.2 1.8 1 1 0 1 1 1 1 Cytidylyltransferase-like ATP-sulfurylase PF01747.17 gi|452209213|ref|YP_007489327.1| - 0.03 13.8 0.5 1.8 8.0 0.0 2.3 1 1 1 2 2 2 0 ATP-sulfurylase FrhB_FdhB_C PF04432.13 gi|452209214|ref|YP_007489328.1| - 1.2e-37 129.2 0.1 2e-37 128.4 0.1 1.4 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.13 gi|452209214|ref|YP_007489328.1| - 2.4e-16 59.6 0.0 4.1e-16 58.9 0.0 1.4 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4_9 PF13187.6 gi|452209214|ref|YP_007489328.1| - 1.4e-05 25.1 8.1 1.4e-05 25.1 8.1 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|452209214|ref|YP_007489328.1| - 1.5e-05 24.6 17.8 0.00042 20.0 6.0 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|452209214|ref|YP_007489328.1| - 2e-05 24.9 5.0 5.7e-05 23.5 5.0 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|452209214|ref|YP_007489328.1| - 4.5e-05 24.0 9.5 4.5e-05 24.0 9.5 2.3 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|452209214|ref|YP_007489328.1| - 0.00066 19.8 17.8 0.03 14.4 3.8 3.1 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|452209214|ref|YP_007489328.1| - 0.00086 19.8 5.2 0.00086 19.8 5.2 2.0 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|452209214|ref|YP_007489328.1| - 0.0028 17.8 18.6 0.0067 16.5 13.5 2.7 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452209214|ref|YP_007489328.1| - 0.0079 17.1 10.9 0.0079 17.1 10.9 2.6 2 1 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|452209214|ref|YP_007489328.1| - 0.008 16.2 15.0 0.094 12.9 3.7 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|452209214|ref|YP_007489328.1| - 0.025 15.1 1.5 0.025 15.1 1.5 2.8 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_6 PF12837.7 gi|452209214|ref|YP_007489328.1| - 0.027 14.6 5.3 0.027 14.6 5.3 3.3 3 0 0 3 3 3 0 4Fe-4S binding domain CTP_transf_like PF01467.26 gi|452209214|ref|YP_007489328.1| - 0.042 14.0 0.0 0.071 13.3 0.0 1.3 1 0 0 1 1 1 0 Cytidylyltransferase-like Desulfoferrod_N PF06397.12 gi|452209215|ref|YP_007489329.1| - 6.2e-17 60.9 6.7 6.7e-17 60.8 6.7 1.0 1 0 0 1 1 1 1 Desulfoferrodoxin, N-terminal domain zf-UDP PF14569.6 gi|452209215|ref|YP_007489329.1| - 0.016 15.3 0.7 0.017 15.2 0.7 1.2 1 0 0 1 1 1 0 Zinc-binding RING-finger zf_UBZ PF18439.1 gi|452209215|ref|YP_007489329.1| - 0.15 11.6 0.7 0.26 10.9 0.1 1.7 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger DUF2180 PF09947.9 gi|452209216|ref|YP_007489330.1| - 8.2e-34 115.4 6.5 9.4e-34 115.2 6.5 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2180) DZR PF12773.7 gi|452209216|ref|YP_007489330.1| - 0.12 12.4 4.7 1.3 9.1 4.7 2.1 1 1 0 1 1 1 0 Double zinc ribbon DUF2180 PF09947.9 gi|452209217|ref|YP_007489331.1| - 1.1e-28 99.0 5.7 1.2e-28 98.8 5.7 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2180) Tnp_zf-ribbon_2 PF13842.6 gi|452209217|ref|YP_007489331.1| - 0.00022 21.9 5.1 0.0018 19.1 1.3 2.1 2 0 0 2 2 2 1 DDE_Tnp_1-like zinc-ribbon zf-UBP_var PF17807.1 gi|452209217|ref|YP_007489331.1| - 0.01 15.6 1.3 0.017 14.8 1.3 1.3 1 0 0 1 1 1 0 Variant UBP zinc finger FYVE PF01363.21 gi|452209217|ref|YP_007489331.1| - 0.085 13.0 2.7 0.18 11.9 2.7 1.7 1 1 0 1 1 1 0 FYVE zinc finger CMD PF02627.20 gi|452209218|ref|YP_007489332.1| - 5.2e-17 61.7 0.1 6.3e-17 61.4 0.1 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Desulfoferrodox PF01880.18 gi|452209219|ref|YP_007489333.1| - 5.4e-29 100.6 2.0 1.8e-28 99.0 2.0 1.7 1 1 0 1 1 1 1 Desulfoferrodoxin Cytochrome_C554 PF13435.6 gi|452209220|ref|YP_007489334.1| - 2e-09 38.2 4.0 4.1e-06 27.6 0.1 2.8 2 0 0 2 2 2 2 Cytochrome c554 and c-prime Cytochrome_C7 PF14522.6 gi|452209220|ref|YP_007489334.1| - 6.1e-07 29.3 8.3 0.005 16.8 1.9 3.1 1 1 1 2 2 2 2 Cytochrome c7 and related cytochrome c C1_1 PF00130.22 gi|452209220|ref|YP_007489334.1| - 3.7e-05 23.5 4.5 0.058 13.3 0.1 3.6 3 1 0 3 3 3 2 Phorbol esters/diacylglycerol binding domain (C1 domain) Cytochrom_c3_2 PF14537.6 gi|452209220|ref|YP_007489334.1| - 0.0015 19.0 11.5 1.5 9.3 1.7 3.9 1 1 2 3 3 3 3 Cytochrome c3 Cytochrome_CBB3 PF13442.6 gi|452209220|ref|YP_007489334.1| - 0.0094 16.3 14.5 2.8 8.3 0.0 5.0 3 2 2 5 5 5 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_NNT PF03264.14 gi|452209220|ref|YP_007489334.1| - 0.035 13.8 11.1 1.5 8.5 0.3 3.4 2 1 1 3 3 3 0 NapC/NirT cytochrome c family, N-terminal region GFA PF04828.14 gi|452209220|ref|YP_007489334.1| - 0.056 13.8 0.6 0.33 11.3 0.0 2.5 2 0 0 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme zinc_ribbon_10 PF10058.9 gi|452209220|ref|YP_007489334.1| - 0.066 12.9 0.3 48 3.8 0.0 3.4 3 0 0 3 3 3 0 Predicted integral membrane zinc-ribbon metal-binding protein DZR PF12773.7 gi|452209220|ref|YP_007489334.1| - 0.15 12.1 5.3 5.7 7.0 0.1 3.1 3 0 0 3 3 3 0 Double zinc ribbon Paired_CXXCH_1 PF09699.10 gi|452209220|ref|YP_007489334.1| - 0.17 11.7 15.3 27 4.6 2.8 4.8 3 2 2 5 5 5 0 Doubled CXXCH motif (Paired_CXXCH_1) FMN_red PF03358.15 gi|452209221|ref|YP_007489335.1| - 2.3e-32 111.9 0.0 3.2e-32 111.4 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|452209221|ref|YP_007489335.1| - 2.4e-05 24.1 0.0 4.2e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 Flavodoxin-like fold Flavoprotein PF02441.19 gi|452209222|ref|YP_007489336.1| - 1.3e-18 67.3 0.0 2.3e-18 66.4 0.0 1.4 1 1 0 1 1 1 1 Flavoprotein Rubrerythrin PF02915.17 gi|452209223|ref|YP_007489337.1| - 9.6e-12 45.5 9.6 1.6e-11 44.8 9.6 1.4 1 1 0 1 1 1 1 Rubrerythrin Ferritin PF00210.24 gi|452209223|ref|YP_007489337.1| - 6.9e-05 22.8 5.2 0.00015 21.7 5.2 1.6 1 1 0 1 1 1 1 Ferritin-like domain Ferritin_2 PF13668.6 gi|452209223|ref|YP_007489337.1| - 0.0001 22.5 1.3 0.27 11.4 0.1 2.1 2 0 0 2 2 2 2 Ferritin-like domain DUF2383 PF09537.10 gi|452209223|ref|YP_007489337.1| - 0.00018 21.8 4.6 0.14 12.5 0.3 2.2 1 1 0 2 2 2 2 Domain of unknown function (DUF2383) COQ7 PF03232.13 gi|452209223|ref|YP_007489337.1| - 0.011 15.5 1.6 0.14 12.0 0.2 2.1 2 0 0 2 2 2 0 Ubiquinone biosynthesis protein COQ7 DUF2777 PF10949.8 gi|452209223|ref|YP_007489337.1| - 0.02 14.6 1.1 0.063 12.9 0.2 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2777) AAL_decarboxy PF03306.13 gi|452209228|ref|YP_007489342.1| - 2.9e-78 262.2 0.0 4.9e-78 261.4 0.0 1.3 1 1 0 1 1 1 1 Alpha-acetolactate decarboxylase ANTH PF07651.16 gi|452209229|ref|YP_007489343.1| - 0.056 12.4 0.1 0.056 12.4 0.1 1.0 1 0 0 1 1 1 0 ANTH domain Iso_dh PF00180.20 gi|452209230|ref|YP_007489344.1| - 1.2e-94 317.3 0.0 1.4e-94 317.2 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Mntp PF02659.15 gi|452209231|ref|YP_007489345.1| - 2.8e-49 166.8 9.2 2.8e-49 166.8 9.2 2.0 2 0 0 2 2 2 2 Putative manganese efflux pump Aconitase_C PF00694.19 gi|452209233|ref|YP_007489347.1| - 6.1e-20 71.9 0.0 8.8e-20 71.4 0.0 1.3 1 0 0 1 1 1 1 Aconitase C-terminal domain Aconitase_2_N PF06434.13 gi|452209233|ref|YP_007489347.1| - 6e-05 22.8 0.0 0.0054 16.4 0.0 2.2 1 1 0 1 1 1 1 Aconitate hydratase 2 N-terminus STT3 PF02516.14 gi|452209234|ref|YP_007489348.1| - 1.2e-34 120.1 32.4 2.7e-34 118.9 32.4 1.5 1 1 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit AglB_L1 PF18079.1 gi|452209234|ref|YP_007489348.1| - 2.5e-28 98.2 1.4 3.9e-27 94.4 3.9 1.8 2 0 0 2 2 2 1 Archaeal glycosylation protein B long peripheral domain Glycos_transf_1 PF00534.20 gi|452209235|ref|YP_007489349.1| - 2.8e-21 75.8 0.0 4.2e-21 75.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|452209235|ref|YP_007489349.1| - 4.8e-17 62.6 0.0 7.5e-17 62.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|452209235|ref|YP_007489349.1| - 1.1e-14 54.8 0.0 1.9e-14 54.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|452209235|ref|YP_007489349.1| - 4.9e-09 36.8 0.0 2.6e-08 34.5 0.0 2.0 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|452209235|ref|YP_007489349.1| - 9.9e-05 22.4 0.0 0.00025 21.1 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferase 4-like Glyco_transf_4 PF13439.6 gi|452209236|ref|YP_007489350.1| - 7.9e-36 123.6 0.5 2.5e-35 122.0 0.9 1.6 2 0 0 2 2 2 1 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.20 gi|452209236|ref|YP_007489350.1| - 3.9e-30 104.6 0.3 7.7e-30 103.7 0.3 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|452209236|ref|YP_007489350.1| - 3.1e-22 79.4 0.0 5.6e-22 78.6 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|452209236|ref|YP_007489350.1| - 9.1e-22 78.2 0.0 2.3e-21 76.9 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|452209236|ref|YP_007489350.1| - 1.1e-09 38.4 0.0 1.9e-09 37.6 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_transf_5 PF08323.11 gi|452209236|ref|YP_007489350.1| - 0.00026 20.8 0.3 0.056 13.1 0.0 2.4 1 1 1 2 2 2 2 Starch synthase catalytic domain Glyco_trans_1_2 PF13524.6 gi|452209236|ref|YP_007489350.1| - 0.011 16.1 0.1 0.22 12.0 0.0 2.4 2 0 0 2 2 2 0 Glycosyl transferases group 1 DUF2325 PF10087.9 gi|452209236|ref|YP_007489350.1| - 0.017 15.2 0.0 2.8 8.1 0.0 3.0 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2325) NTP_transferase PF00483.23 gi|452209237|ref|YP_007489351.1| - 1.6e-29 103.2 0.0 1.9e-29 103.0 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|452209237|ref|YP_007489351.1| - 0.089 13.1 0.0 0.13 12.6 0.0 1.2 1 0 0 1 1 1 0 MobA-like NTP transferase domain Methyltransf_31 PF13847.6 gi|452209238|ref|YP_007489352.1| - 1.2e-39 135.5 0.0 1.7e-39 135.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|452209238|ref|YP_007489352.1| - 2e-24 86.1 0.0 4.4e-24 85.0 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|452209238|ref|YP_007489352.1| - 3.3e-23 82.2 0.0 8e-23 80.9 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|452209238|ref|YP_007489352.1| - 8.5e-21 74.4 0.0 1.4e-20 73.7 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|452209238|ref|YP_007489352.1| - 1.2e-12 48.0 0.0 1.7e-12 47.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|452209238|ref|YP_007489352.1| - 3e-12 46.8 0.0 4.6e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_12 PF08242.12 gi|452209238|ref|YP_007489352.1| - 3e-11 43.9 0.0 5.3e-11 43.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.15 gi|452209238|ref|YP_007489352.1| - 7.9e-08 32.4 0.3 3.5e-07 30.3 0.3 1.9 1 1 0 1 1 1 1 Hypothetical methyltransferase UPF0020 PF01170.18 gi|452209238|ref|YP_007489352.1| - 1.4e-07 31.4 0.0 2.5e-07 30.6 0.0 1.3 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 MTS PF05175.14 gi|452209238|ref|YP_007489352.1| - 3.6e-07 29.9 0.0 6.1e-07 29.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|452209238|ref|YP_007489352.1| - 4.8e-06 26.2 0.0 6.8e-06 25.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_32 PF13679.6 gi|452209238|ref|YP_007489352.1| - 1.4e-05 25.1 0.0 2.2e-05 24.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|452209238|ref|YP_007489352.1| - 0.00015 21.4 0.0 0.00022 20.9 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase FtsJ PF01728.19 gi|452209238|ref|YP_007489352.1| - 0.00028 21.0 0.0 0.00035 20.7 0.0 1.2 1 0 0 1 1 1 1 FtsJ-like methyltransferase CMAS PF02353.20 gi|452209238|ref|YP_007489352.1| - 0.00064 19.1 0.0 0.00093 18.6 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_4 PF02390.17 gi|452209238|ref|YP_007489352.1| - 0.00067 19.2 0.0 0.0017 17.8 0.0 1.7 1 1 0 2 2 2 1 Putative methyltransferase Met_10 PF02475.16 gi|452209238|ref|YP_007489352.1| - 0.0058 16.4 0.1 0.0087 15.8 0.1 1.3 1 0 0 1 1 1 1 Met-10+ like-protein Methyltr_RsmB-F PF01189.17 gi|452209238|ref|YP_007489352.1| - 0.006 16.2 0.0 0.014 15.1 0.0 1.6 1 1 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltransf_18 PF12847.7 gi|452209238|ref|YP_007489352.1| - 0.017 15.0 0.0 0.027 14.4 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_3 PF01596.17 gi|452209238|ref|YP_007489352.1| - 0.031 13.5 0.0 0.047 12.9 0.0 1.4 1 0 0 1 1 1 0 O-methyltransferase DOT1 PF08123.13 gi|452209238|ref|YP_007489352.1| - 0.065 12.8 0.1 0.1 12.1 0.1 1.4 1 1 0 1 1 1 0 Histone methylation protein DOT1 Fibrillarin PF01269.17 gi|452209238|ref|YP_007489352.1| - 0.085 12.0 0.0 0.56 9.3 0.0 1.9 2 0 0 2 2 2 0 Fibrillarin Methyltransf_24 PF13578.6 gi|452209238|ref|YP_007489352.1| - 0.12 13.4 0.0 0.18 12.8 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain GidB PF02527.15 gi|452209238|ref|YP_007489352.1| - 0.13 11.5 0.1 0.3 10.4 0.1 1.6 1 1 0 1 1 1 0 rRNA small subunit methyltransferase G N6_N4_Mtase PF01555.18 gi|452209238|ref|YP_007489352.1| - 0.22 11.2 0.0 16 5.1 0.0 2.1 2 0 0 2 2 2 0 DNA methylase DUF4768 PF15989.5 gi|452209242|ref|YP_007489356.1| - 0.027 14.4 1.1 0.028 14.4 1.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4768) DHODB_Fe-S_bind PF10418.9 gi|452209243|ref|YP_007489357.1| - 4.4e-13 48.8 4.0 9.2e-13 47.8 4.0 1.6 1 0 0 1 1 1 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B NAD_binding_1 PF00175.21 gi|452209243|ref|YP_007489357.1| - 6.5e-08 33.2 0.0 1.7e-07 31.9 0.0 1.7 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 gi|452209243|ref|YP_007489357.1| - 0.0022 18.3 0.0 0.0038 17.5 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain Cpn10 PF00166.21 gi|452209243|ref|YP_007489357.1| - 0.0099 15.9 0.6 0.044 13.9 0.0 2.3 1 1 1 2 2 2 1 Chaperonin 10 Kd subunit Pept_tRNA_hydro PF01195.19 gi|452209243|ref|YP_007489357.1| - 0.049 13.6 0.0 0.062 13.3 0.0 1.3 1 0 0 1 1 1 0 Peptidyl-tRNA hydrolase NAD_binding_6 PF08030.12 gi|452209243|ref|YP_007489357.1| - 0.09 12.9 0.0 0.13 12.3 0.0 1.3 1 0 0 1 1 1 0 Ferric reductase NAD binding domain Fer4_20 PF14691.6 gi|452209244|ref|YP_007489358.1| - 1e-44 150.9 6.0 1.6e-44 150.3 6.0 1.3 1 0 0 1 1 1 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Pyr_redox_2 PF07992.14 gi|452209244|ref|YP_007489358.1| - 2.6e-37 128.6 1.8 3.6e-37 128.2 1.8 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|452209244|ref|YP_007489358.1| - 1e-17 64.5 3.6 1.1e-08 35.5 0.2 3.4 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|452209244|ref|YP_007489358.1| - 1.5e-11 44.1 0.8 2.5e-06 27.0 0.1 3.3 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|452209244|ref|YP_007489358.1| - 1.2e-08 35.1 1.2 2.5e-08 34.0 0.0 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain NAD_binding_7 PF13241.6 gi|452209244|ref|YP_007489358.1| - 3.7e-08 33.7 0.6 0.0026 18.2 0.2 2.8 2 1 0 2 2 2 2 Putative NAD(P)-binding AlaDh_PNT_C PF01262.21 gi|452209244|ref|YP_007489358.1| - 1e-07 31.5 5.6 0.0021 17.4 0.9 2.7 2 1 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain FAD_oxidored PF12831.7 gi|452209244|ref|YP_007489358.1| - 1.1e-07 31.6 3.2 3.6e-05 23.3 0.0 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase Thi4 PF01946.17 gi|452209244|ref|YP_007489358.1| - 5.7e-06 25.7 0.2 4.7e-05 22.8 0.0 2.1 2 0 0 2 2 2 1 Thi4 family FAD_binding_2 PF00890.24 gi|452209244|ref|YP_007489358.1| - 1.3e-05 24.5 1.2 1.3e-05 24.5 1.2 2.8 3 0 0 3 3 3 1 FAD binding domain HI0933_like PF03486.14 gi|452209244|ref|YP_007489358.1| - 3.2e-05 22.8 0.4 3.2e-05 22.8 0.4 2.0 2 0 0 2 2 2 1 HI0933-like protein GIDA PF01134.22 gi|452209244|ref|YP_007489358.1| - 3.3e-05 23.2 3.2 0.00048 19.3 0.0 2.8 3 0 0 3 3 3 1 Glucose inhibited division protein A FAD_binding_3 PF01494.19 gi|452209244|ref|YP_007489358.1| - 0.00019 20.8 0.6 0.00071 18.9 0.1 1.9 2 0 0 2 2 2 1 FAD binding domain ELFV_dehydrog PF00208.21 gi|452209244|ref|YP_007489358.1| - 0.00044 20.0 0.1 0.22 11.2 0.0 2.2 2 0 0 2 2 2 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 2-Hacid_dh_C PF02826.19 gi|452209244|ref|YP_007489358.1| - 0.0006 19.2 0.0 0.84 9.0 0.0 2.5 2 0 0 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FMO-like PF00743.19 gi|452209244|ref|YP_007489358.1| - 0.0013 17.2 0.0 0.36 9.2 0.0 2.3 2 0 0 2 2 2 2 Flavin-binding monooxygenase-like Shikimate_DH PF01488.20 gi|452209244|ref|YP_007489358.1| - 0.0016 18.5 0.0 3.3 7.8 0.1 4.0 4 0 0 4 4 4 1 Shikimate / quinate 5-dehydrogenase PALP PF00291.25 gi|452209244|ref|YP_007489358.1| - 0.0019 17.7 0.0 1.9 7.8 0.0 2.7 2 1 1 3 3 3 2 Pyridoxal-phosphate dependent enzyme DAO PF01266.24 gi|452209244|ref|YP_007489358.1| - 0.0025 17.5 0.5 0.0025 17.5 0.5 2.6 1 1 0 2 2 2 1 FAD dependent oxidoreductase F420_oxidored PF03807.17 gi|452209244|ref|YP_007489358.1| - 0.0034 17.9 0.4 1.7 9.3 0.0 3.3 3 0 0 3 3 3 1 NADP oxidoreductase coenzyme F420-dependent Amino_oxidase PF01593.24 gi|452209244|ref|YP_007489358.1| - 0.0066 15.8 0.1 0.0066 15.8 0.1 1.7 2 0 0 2 2 1 1 Flavin containing amine oxidoreductase Fer4_18 PF13746.6 gi|452209244|ref|YP_007489358.1| - 0.0093 16.2 1.7 0.012 15.8 0.7 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain K_oxygenase PF13434.6 gi|452209244|ref|YP_007489358.1| - 0.011 14.9 0.1 1.7 7.7 0.0 2.7 3 0 0 3 3 3 0 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_9 PF13454.6 gi|452209244|ref|YP_007489358.1| - 0.034 14.1 0.2 0.15 12.1 0.1 2.1 2 0 0 2 2 2 0 FAD-NAD(P)-binding UDPG_MGDP_dh_N PF03721.14 gi|452209244|ref|YP_007489358.1| - 0.037 13.6 0.1 0.17 11.4 0.0 2.1 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Oxidored_nitro PF00148.19 gi|452209244|ref|YP_007489358.1| - 0.049 12.3 1.4 3.6 6.2 0.1 2.5 2 1 1 3 3 3 0 Nitrogenase component 1 type Oxidoreductase YjeF_N PF03853.15 gi|452209244|ref|YP_007489358.1| - 0.054 13.4 0.0 4.2 7.2 0.0 2.3 2 0 0 2 2 2 0 YjeF-related protein N-terminus TrkA_N PF02254.18 gi|452209244|ref|YP_007489358.1| - 0.11 12.8 0.2 11 6.4 0.0 2.6 2 0 0 2 2 2 0 TrkA-N domain 3HCDH_N PF02737.18 gi|452209244|ref|YP_007489358.1| - 0.11 12.3 0.2 0.82 9.5 0.0 2.3 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Lycopene_cycl PF05834.12 gi|452209244|ref|YP_007489358.1| - 0.12 11.4 0.2 0.12 11.4 0.2 1.7 2 0 0 2 2 2 0 Lycopene cyclase protein Trp_halogenase PF04820.14 gi|452209244|ref|YP_007489358.1| - 0.42 9.4 3.6 0.2 10.5 0.3 1.8 2 0 0 2 2 2 0 Tryptophan halogenase AdoHcyase_NAD PF00670.21 gi|452209244|ref|YP_007489358.1| - 0.89 9.6 5.4 12 5.9 0.0 3.0 3 0 0 3 3 3 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Fer4_7 PF12838.7 gi|452209244|ref|YP_007489358.1| - 7 7.3 10.1 0.14 12.8 0.7 2.6 2 1 1 3 3 2 0 4Fe-4S dicluster domain APG17 PF04108.12 gi|452209245|ref|YP_007489359.1| - 0.0097 15.1 2.0 0.011 14.9 1.0 1.4 2 0 0 2 2 2 1 Autophagy protein Apg17 FTHFS PF01268.19 gi|452209245|ref|YP_007489359.1| - 0.079 11.1 0.4 0.11 10.6 0.4 1.2 1 0 0 1 1 1 0 Formate--tetrahydrofolate ligase Wzy_C PF04932.15 gi|452209247|ref|YP_007489361.1| - 8.2 6.0 9.9 7.9 6.1 9.9 1.0 1 0 0 1 1 1 0 O-Antigen ligase NikR_C PF08753.11 gi|452209248|ref|YP_007489362.1| - 1e-28 99.3 1.4 1.5e-28 98.8 1.4 1.2 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.21 gi|452209248|ref|YP_007489362.1| - 8.6e-10 38.2 0.9 1.5e-09 37.4 0.1 1.8 2 0 0 2 2 2 1 Ribbon-helix-helix protein, copG family HicB_lk_antitox PF15919.5 gi|452209248|ref|YP_007489362.1| - 0.012 15.7 0.0 0.028 14.5 0.0 1.6 2 0 0 2 2 2 0 HicB_like antitoxin of bacterial toxin-antitoxin system RHH_8 PF17723.1 gi|452209248|ref|YP_007489362.1| - 0.031 14.4 0.0 0.044 14.0 0.0 1.4 1 0 0 1 1 1 0 Ribbon-Helix-Helix transcriptional regulator family ARD PF03079.14 gi|452209249|ref|YP_007489363.1| - 0.0017 18.5 0.0 0.0019 18.4 0.0 1.0 1 0 0 1 1 1 1 ARD/ARD' family FAM194 PF14977.6 gi|452209249|ref|YP_007489363.1| - 0.048 13.0 0.0 0.052 12.9 0.0 1.0 1 0 0 1 1 1 0 FAM194 protein Nitroreductase PF00881.24 gi|452209250|ref|YP_007489364.1| - 2.9e-33 115.3 0.3 4.1e-19 69.3 0.0 2.0 1 1 1 2 2 2 2 Nitroreductase family TM1586_NiRdase PF14512.6 gi|452209250|ref|YP_007489364.1| - 6e-17 61.9 0.1 5e-06 26.3 0.0 3.0 1 1 2 3 3 3 3 Putative TM nitroreductase IlvN PF07991.12 gi|452209252|ref|YP_007489366.1| - 2e-80 268.2 0.5 3.1e-80 267.6 0.5 1.3 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain IlvC PF01450.19 gi|452209252|ref|YP_007489366.1| - 2.2e-60 203.1 0.7 3.2e-60 202.6 0.7 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain 2-Hacid_dh_C PF02826.19 gi|452209252|ref|YP_007489366.1| - 2.5e-07 30.2 0.0 4.8e-07 29.3 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 gi|452209252|ref|YP_007489366.1| - 6.7e-07 29.6 0.0 1.2e-06 28.8 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|452209252|ref|YP_007489366.1| - 2e-06 28.3 0.0 4.6e-06 27.1 0.0 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent AdoHcyase_NAD PF00670.21 gi|452209252|ref|YP_007489366.1| - 0.0014 18.8 0.0 0.0024 17.9 0.0 1.4 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CoA_binding PF02629.19 gi|452209252|ref|YP_007489366.1| - 0.015 15.9 0.0 0.038 14.7 0.0 1.7 1 0 0 1 1 1 0 CoA binding domain Nitro_FeMo-Co PF02579.17 gi|452209252|ref|YP_007489366.1| - 0.02 15.2 0.0 0.052 13.9 0.0 1.7 1 0 0 1 1 1 0 Dinitrogenase iron-molybdenum cofactor ApbA PF02558.16 gi|452209252|ref|YP_007489366.1| - 0.032 13.9 0.1 0.072 12.7 0.0 1.7 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Mur_ligase PF01225.25 gi|452209252|ref|YP_007489366.1| - 0.083 13.2 0.2 0.6 10.5 0.2 2.4 1 1 0 1 1 1 0 Mur ligase family, catalytic domain ALS_ss_C PF10369.9 gi|452209253|ref|YP_007489367.1| - 4.6e-32 110.0 6.2 7.2e-32 109.4 2.2 2.1 2 0 0 2 2 2 1 Small subunit of acetolactate synthase ACT_5 PF13710.6 gi|452209253|ref|YP_007489367.1| - 2.7e-19 68.7 0.7 1.7e-17 63.0 0.2 2.5 2 0 0 2 2 2 1 ACT domain ACT PF01842.25 gi|452209253|ref|YP_007489367.1| - 1e-17 63.6 1.2 1.7e-16 59.7 0.3 2.4 2 0 0 2 2 2 1 ACT domain ACT_4 PF13291.6 gi|452209253|ref|YP_007489367.1| - 7.5e-06 26.4 1.3 7.5e-06 26.4 1.3 1.9 2 1 0 2 2 2 1 ACT domain SLS PF14611.6 gi|452209253|ref|YP_007489367.1| - 0.011 15.6 1.2 0.78 9.5 0.3 2.0 1 1 1 2 2 2 0 Mitochondrial inner-membrane-bound regulator NIL PF09383.10 gi|452209253|ref|YP_007489367.1| - 0.056 13.3 0.2 1.3 8.9 0.0 2.5 2 1 0 2 2 2 0 NIL domain DUF3764 PF12594.8 gi|452209253|ref|YP_007489367.1| - 0.094 12.8 0.2 3.2 7.9 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3764) YbbR PF07949.12 gi|452209253|ref|YP_007489367.1| - 0.095 13.1 4.2 3.6 8.0 0.1 2.4 2 0 0 2 2 2 0 YbbR-like protein RMMBL PF07521.12 gi|452209253|ref|YP_007489367.1| - 0.1 12.6 0.0 7.6 6.6 0.0 2.5 2 1 0 2 2 2 0 Zn-dependent metallo-hydrolase RNA specificity domain Nucleo_P87 PF07267.11 gi|452209253|ref|YP_007489367.1| - 0.15 10.9 1.0 0.18 10.6 1.0 1.0 1 0 0 1 1 1 0 Nucleopolyhedrovirus capsid protein P87 TPP_enzyme_N PF02776.18 gi|452209254|ref|YP_007489368.1| - 6.1e-60 201.7 0.1 8.1e-59 198.1 0.0 2.6 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|452209254|ref|YP_007489368.1| - 5.4e-56 188.6 0.0 4.6e-55 185.6 0.0 2.3 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|452209254|ref|YP_007489368.1| - 6.5e-53 178.1 0.1 1.5e-52 177.0 0.1 1.6 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain POR_N PF01855.19 gi|452209254|ref|YP_007489368.1| - 0.011 15.5 0.0 0.022 14.5 0.0 1.5 1 0 0 1 1 1 0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HMGL-like PF00682.19 gi|452209256|ref|YP_007489370.1| - 9.7e-75 251.5 1.2 9.7e-75 251.5 1.2 1.6 2 0 0 2 2 2 1 HMGL-like LeuA_dimer PF08502.10 gi|452209256|ref|YP_007489370.1| - 1.4e-36 125.3 1.9 2.5e-36 124.5 1.9 1.4 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain Peptidase_M42 PF05343.14 gi|452209257|ref|YP_007489371.1| - 7.5e-116 386.2 0.9 8.8e-116 386.0 0.9 1.0 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase Peptidase_M20 PF01546.28 gi|452209257|ref|YP_007489371.1| - 2.1e-08 34.1 0.2 7e-08 32.4 0.2 1.8 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M28 PF04389.17 gi|452209257|ref|YP_007489371.1| - 0.0066 16.2 0.0 0.67 9.6 0.0 2.7 2 1 0 2 2 2 1 Peptidase family M28 Peptidase_M18 PF02127.15 gi|452209257|ref|YP_007489371.1| - 0.071 11.9 0.0 0.11 11.2 0.0 1.3 1 0 0 1 1 1 0 Aminopeptidase I zinc metalloprotease (M18) Prefoldin_2 PF01920.20 gi|452209258|ref|YP_007489372.1| - 1.4e-24 86.0 17.4 1.6e-24 85.9 17.4 1.0 1 0 0 1 1 1 1 Prefoldin subunit IMS PF00817.20 gi|452209258|ref|YP_007489372.1| - 0.0097 15.9 1.2 0.013 15.5 1.2 1.1 1 0 0 1 1 1 1 impB/mucB/samB family Snf7 PF03357.21 gi|452209258|ref|YP_007489372.1| - 0.012 15.2 14.3 0.18 11.4 5.1 2.2 2 0 0 2 2 2 0 Snf7 PI_PP_I PF18363.1 gi|452209258|ref|YP_007489372.1| - 0.034 14.3 1.4 0.88 9.8 0.1 2.1 2 0 0 2 2 2 0 Phosphoinositide phosphatase insertion domain Cep57_MT_bd PF06657.13 gi|452209258|ref|YP_007489372.1| - 0.083 13.4 12.0 0.71 10.4 2.4 2.4 2 1 0 2 2 2 0 Centrosome microtubule-binding domain of Cep57 GAS PF13851.6 gi|452209258|ref|YP_007489372.1| - 0.28 10.5 17.8 13 5.1 17.5 2.0 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding DHR10 PF18595.1 gi|452209258|ref|YP_007489372.1| - 0.52 10.4 19.3 1.9 8.6 4.3 2.1 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain ZapB PF06005.12 gi|452209258|ref|YP_007489372.1| - 0.59 10.6 17.1 2.7 8.5 5.3 2.2 2 0 0 2 2 2 0 Cell division protein ZapB DUF3450 PF11932.8 gi|452209258|ref|YP_007489372.1| - 0.63 9.3 22.0 1.5 8.1 4.9 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) DivIC PF04977.15 gi|452209258|ref|YP_007489372.1| - 0.89 9.4 16.6 0.14 11.9 4.1 2.9 2 1 0 2 2 2 0 Septum formation initiator Nup54 PF13874.6 gi|452209258|ref|YP_007489372.1| - 1.3 9.1 16.2 13 5.9 16.2 2.1 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 TSNAXIP1_N PF15739.5 gi|452209258|ref|YP_007489372.1| - 1.4 9.4 12.7 0.57 10.6 4.2 2.1 2 0 0 2 2 2 0 Translin-associated factor X-interacting N-terminus CENP-F_leu_zip PF10473.9 gi|452209258|ref|YP_007489372.1| - 2.1 8.4 20.1 75 3.3 20.7 2.0 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 NBD_C PF17042.5 gi|452209258|ref|YP_007489372.1| - 2.4 8.6 7.5 3.6 8.1 7.5 1.2 1 0 0 1 1 1 0 Nucleotide-binding C-terminal domain YojJ PF10372.9 gi|452209258|ref|YP_007489372.1| - 2.6 8.2 9.3 0.66 10.1 0.4 2.5 2 1 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus DUF3552 PF12072.8 gi|452209258|ref|YP_007489372.1| - 3.3 7.1 20.9 0.38 10.2 6.2 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) V_ATPase_I PF01496.19 gi|452209258|ref|YP_007489372.1| - 3.4 5.5 8.1 4.3 5.1 8.1 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Com_YlbF PF06133.11 gi|452209258|ref|YP_007489372.1| - 3.9 8.1 19.1 2.3e+02 2.4 19.5 2.3 1 1 0 1 1 1 0 Control of competence regulator ComK, YlbF/YmcA Spc24 PF08286.11 gi|452209258|ref|YP_007489372.1| - 4.2 7.6 14.4 5.3 7.3 5.7 2.2 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 APG6_N PF17675.1 gi|452209258|ref|YP_007489372.1| - 4.5 7.8 22.4 1.3e+02 3.1 22.4 2.2 1 1 0 1 1 1 0 Apg6 coiled-coil region LPP PF04728.13 gi|452209258|ref|YP_007489372.1| - 6.4 7.2 14.5 27 5.3 7.3 2.9 2 2 1 3 3 3 0 Lipoprotein leucine-zipper FlxA PF14282.6 gi|452209258|ref|YP_007489372.1| - 9.9 6.2 29.3 4.7 7.3 4.4 2.4 2 1 0 2 2 2 0 FlxA-like protein DHHA1 PF02272.19 gi|452209259|ref|YP_007489373.1| - 1.2e-12 48.4 1.3 2.2e-12 47.6 1.3 1.5 1 0 0 1 1 1 1 DHHA1 domain DHH PF01368.20 gi|452209259|ref|YP_007489373.1| - 1.1e-11 44.8 0.1 2.3e-11 43.8 0.1 1.5 1 0 0 1 1 1 1 DHH family AMP-binding_C_2 PF14535.6 gi|452209260|ref|YP_007489374.1| - 6.5e-32 109.7 0.1 1.7e-31 108.4 0.0 1.8 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 gi|452209260|ref|YP_007489374.1| - 2.6e-21 75.7 0.1 8e-21 74.1 0.0 1.7 2 0 0 2 2 2 1 AMP-binding enzyme GH3 PF03321.13 gi|452209260|ref|YP_007489374.1| - 0.0064 15.4 0.0 0.056 12.3 0.0 2.0 2 0 0 2 2 2 1 GH3 auxin-responsive promoter ACT PF01842.25 gi|452209262|ref|YP_007489376.1| - 2.6e-19 68.7 0.3 3.2e-09 36.4 0.0 2.3 2 0 0 2 2 2 2 ACT domain ACT_7 PF13840.6 gi|452209262|ref|YP_007489376.1| - 1.6e-07 31.0 0.1 0.021 14.6 0.0 2.6 2 1 0 2 2 2 2 ACT domain ACT_4 PF13291.6 gi|452209262|ref|YP_007489376.1| - 2.3e-07 31.3 0.2 0.0037 17.8 0.0 2.2 2 0 0 2 2 2 2 ACT domain TxDE PF18711.1 gi|452209262|ref|YP_007489376.1| - 0.064 13.4 0.7 7 6.9 0.2 2.7 3 0 0 3 3 3 0 Toxoflavin-degrading enzyme MtrB PF05440.12 gi|452209262|ref|YP_007489376.1| - 0.1 13.0 0.1 0.18 12.2 0.1 1.4 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase subunit B DUF2103 PF09876.9 gi|452209264|ref|YP_007489378.1| - 3.7e-37 126.2 0.9 4.5e-37 126.0 0.9 1.1 1 0 0 1 1 1 1 Predicted metal-binding protein (DUF2103) Semialdhyde_dh PF01118.24 gi|452209264|ref|YP_007489378.1| - 0.028 14.9 0.1 0.036 14.5 0.1 1.3 1 1 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain NYN PF01936.18 gi|452209266|ref|YP_007489380.1| - 1.5e-23 83.9 0.0 2e-23 83.5 0.0 1.1 1 0 0 1 1 1 1 NYN domain DUF460 PF04312.13 gi|452209266|ref|YP_007489380.1| - 0.11 12.2 0.0 3 7.5 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF460) Rhomboid PF01694.22 gi|452209269|ref|YP_007489383.1| - 5.6e-34 117.3 13.3 1.1e-33 116.4 13.3 1.3 1 0 0 1 1 1 1 Rhomboid family DUF1751 PF08551.10 gi|452209269|ref|YP_007489383.1| - 5e-05 23.8 0.6 5e-05 23.8 0.6 2.2 2 1 1 3 3 3 1 Eukaryotic integral membrane protein (DUF1751) Prismane PF03063.20 gi|452209270|ref|YP_007489384.1| - 1.5e-108 363.7 4.8 1.3e-90 304.5 0.0 2.1 1 1 1 2 2 2 2 Prismane/CO dehydrogenase family Fer4_7 PF12838.7 gi|452209270|ref|YP_007489384.1| - 1.9e-05 25.2 6.7 1.9e-05 25.2 6.7 2.5 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|452209270|ref|YP_007489384.1| - 3.4e-05 23.9 6.3 3.4e-05 23.9 6.3 2.4 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452209270|ref|YP_007489384.1| - 0.00053 20.1 22.7 0.0011 19.0 13.1 3.5 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|452209270|ref|YP_007489384.1| - 0.0024 18.0 14.3 0.065 13.3 0.2 3.5 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|452209270|ref|YP_007489384.1| - 0.032 14.8 1.3 0.032 14.8 1.3 3.7 3 0 0 3 3 2 0 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452209270|ref|YP_007489384.1| - 0.034 14.3 25.1 0.054 13.6 1.6 4.1 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|452209270|ref|YP_007489384.1| - 0.059 13.6 8.1 8.4 6.6 7.8 2.6 1 1 1 2 2 2 0 4Fe-4S dicluster domain Glyco_transf_28 PF03033.20 gi|452209270|ref|YP_007489384.1| - 0.059 13.4 0.0 0.13 12.3 0.0 1.5 1 0 0 1 1 1 0 Glycosyltransferase family 28 N-terminal domain VRR_NUC PF08774.11 gi|452209270|ref|YP_007489384.1| - 0.098 12.7 0.0 0.22 11.6 0.0 1.6 1 0 0 1 1 1 0 VRR-NUC domain Fer4 PF00037.27 gi|452209270|ref|YP_007489384.1| - 0.26 11.2 26.4 0.056 13.3 3.5 3.9 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_6 PF12837.7 gi|452209270|ref|YP_007489384.1| - 0.45 10.7 28.3 0.026 14.6 3.9 3.4 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|452209270|ref|YP_007489384.1| - 2.2 9.2 13.2 0.2 12.5 0.7 2.9 3 0 0 3 3 2 0 4Fe-4S dicluster domain CO_dh PF02552.16 gi|452209271|ref|YP_007489385.1| - 4.1e-31 108.0 0.0 4.8e-31 107.8 0.0 1.0 1 0 0 1 1 1 1 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit TPP_enzyme_M PF00205.22 gi|452209271|ref|YP_007489385.1| - 4.4e-08 32.9 0.0 6.7e-08 32.4 0.0 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain Mfa2 PF08842.10 gi|452209271|ref|YP_007489385.1| - 0.11 12.1 0.0 0.14 11.7 0.0 1.2 1 0 0 1 1 1 0 Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 CdhC PF03598.15 gi|452209272|ref|YP_007489386.1| - 2.3e-61 206.2 0.0 3.6e-61 205.6 0.0 1.3 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase complex beta subunit HP0268 PF18618.1 gi|452209272|ref|YP_007489386.1| - 0.01 16.3 1.8 0.26 11.7 0.4 2.7 2 1 0 2 2 2 0 HP0268 CbiA PF01656.23 gi|452209273|ref|YP_007489387.1| - 1.3e-17 64.0 0.0 2.2e-17 63.3 0.0 1.4 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|452209273|ref|YP_007489387.1| - 1.9e-15 57.2 0.1 3.7e-15 56.3 0.1 1.5 1 1 0 1 1 1 1 AAA domain ParA PF10609.9 gi|452209273|ref|YP_007489387.1| - 1.5e-11 44.2 1.0 8.3e-05 22.2 0.1 2.4 2 1 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase Fer4_NifH PF00142.18 gi|452209273|ref|YP_007489387.1| - 8.3e-10 38.5 2.3 4.1e-09 36.3 2.3 1.8 1 1 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CBP_BcsQ PF06564.12 gi|452209273|ref|YP_007489387.1| - 2.4e-07 30.5 0.0 0.00093 18.7 0.0 2.5 3 0 0 3 3 3 2 Cellulose biosynthesis protein BcsQ ArsA_ATPase PF02374.15 gi|452209273|ref|YP_007489387.1| - 1.4e-06 27.8 2.4 1.7e-05 24.1 2.6 2.3 1 1 0 1 1 1 1 Anion-transporting ATPase NTPase_1 PF03266.15 gi|452209273|ref|YP_007489387.1| - 1.7e-05 24.8 0.6 0.17 11.8 0.3 2.2 2 0 0 2 2 2 2 NTPase AAA_16 PF13191.6 gi|452209273|ref|YP_007489387.1| - 0.00015 22.2 0.0 0.00022 21.6 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain MipZ PF09140.11 gi|452209273|ref|YP_007489387.1| - 0.00039 19.8 1.4 0.025 13.9 0.2 2.4 2 1 0 2 2 2 1 ATPase MipZ AAA_26 PF13500.6 gi|452209273|ref|YP_007489387.1| - 0.00048 20.0 4.6 0.044 13.6 0.4 2.5 2 1 0 2 2 2 2 AAA domain AAA_24 PF13479.6 gi|452209273|ref|YP_007489387.1| - 0.00061 19.6 0.2 0.0017 18.1 0.1 1.7 1 1 0 1 1 1 1 AAA domain DUF87 PF01935.17 gi|452209273|ref|YP_007489387.1| - 0.0015 18.7 2.6 0.0041 17.2 0.5 2.3 2 0 0 2 2 2 1 Helicase HerA, central domain Toprim PF01751.22 gi|452209273|ref|YP_007489387.1| - 0.0019 18.4 0.1 0.023 14.9 0.0 2.3 2 0 0 2 2 2 1 Toprim domain PRK PF00485.18 gi|452209273|ref|YP_007489387.1| - 0.0054 16.5 0.2 0.055 13.2 0.0 2.1 2 0 0 2 2 2 1 Phosphoribulokinase / Uridine kinase family APS_kinase PF01583.20 gi|452209273|ref|YP_007489387.1| - 0.0055 16.6 0.1 0.0099 15.8 0.1 1.4 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_30 PF13604.6 gi|452209273|ref|YP_007489387.1| - 0.0063 16.3 0.3 0.014 15.1 0.3 1.8 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|452209273|ref|YP_007489387.1| - 0.02 15.1 0.5 0.05 13.9 0.5 2.0 1 1 0 1 1 1 0 AAA domain PEPcase_2 PF14010.6 gi|452209273|ref|YP_007489387.1| - 0.021 13.4 1.1 0.027 13.0 1.1 1.1 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxylase AAA_19 PF13245.6 gi|452209273|ref|YP_007489387.1| - 0.026 14.9 2.6 0.43 10.9 2.6 2.4 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.27 gi|452209273|ref|YP_007489387.1| - 0.027 15.0 0.0 0.039 14.5 0.0 1.6 1 1 0 1 1 1 0 ABC transporter TrwB_AAD_bind PF10412.9 gi|452209273|ref|YP_007489387.1| - 0.028 13.4 0.4 0.05 12.5 0.4 1.4 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain Zeta_toxin PF06414.12 gi|452209273|ref|YP_007489387.1| - 0.028 13.7 0.1 0.051 12.8 0.1 1.4 1 0 0 1 1 1 0 Zeta toxin ResIII PF04851.15 gi|452209273|ref|YP_007489387.1| - 0.038 14.0 0.0 0.061 13.3 0.0 1.4 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit MobB PF03205.14 gi|452209273|ref|YP_007489387.1| - 0.041 13.8 0.1 0.093 12.6 0.1 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B SRP54 PF00448.22 gi|452209273|ref|YP_007489387.1| - 0.045 13.4 3.3 0.31 10.6 1.0 2.2 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain ATPase PF06745.13 gi|452209273|ref|YP_007489387.1| - 0.053 12.9 0.5 0.34 10.2 0.0 2.2 2 1 0 2 2 2 0 KaiC DUF2075 PF09848.9 gi|452209273|ref|YP_007489387.1| - 0.06 12.6 0.1 0.094 11.9 0.1 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Toprim_4 PF13662.6 gi|452209273|ref|YP_007489387.1| - 0.068 13.7 0.1 0.39 11.2 0.0 2.2 2 0 0 2 2 2 0 Toprim domain DUF853 PF05872.12 gi|452209273|ref|YP_007489387.1| - 0.072 11.7 0.0 0.1 11.2 0.0 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) PIF1 PF05970.14 gi|452209273|ref|YP_007489387.1| - 0.078 12.1 0.1 0.13 11.4 0.1 1.3 1 0 0 1 1 1 0 PIF1-like helicase HTH_19 PF12844.7 gi|452209273|ref|YP_007489387.1| - 0.082 12.9 0.4 0.25 11.4 0.1 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain AAA_18 PF13238.6 gi|452209273|ref|YP_007489387.1| - 0.092 13.3 0.4 0.17 12.5 0.3 1.8 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 gi|452209273|ref|YP_007489387.1| - 0.099 12.2 0.1 0.22 11.0 0.0 1.5 2 0 0 2 2 1 0 P-loop containing dynein motor region Helicase_RecD PF05127.14 gi|452209273|ref|YP_007489387.1| - 0.099 12.5 0.0 0.2 11.5 0.0 1.6 2 0 0 2 2 1 0 Helicase Sigma54_activat PF00158.26 gi|452209273|ref|YP_007489387.1| - 0.12 12.1 0.0 0.21 11.3 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain NACHT PF05729.12 gi|452209273|ref|YP_007489387.1| - 0.12 12.3 0.1 0.21 11.5 0.1 1.5 1 1 0 1 1 1 0 NACHT domain MeaB PF03308.16 gi|452209273|ref|YP_007489387.1| - 0.13 11.3 1.6 0.36 9.8 0.2 2.0 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB RNA_helicase PF00910.22 gi|452209273|ref|YP_007489387.1| - 0.13 12.7 0.0 1.1 9.6 0.0 2.4 3 0 0 3 3 3 0 RNA helicase VirC1 PF07015.11 gi|452209273|ref|YP_007489387.1| - 0.15 11.3 0.9 3.8 6.8 0.1 2.7 3 0 0 3 3 3 0 VirC1 protein AAA_25 PF13481.6 gi|452209273|ref|YP_007489387.1| - 0.44 10.1 2.7 0.64 9.6 0.2 2.4 3 1 0 3 3 2 0 AAA domain LpxK PF02606.14 gi|452209273|ref|YP_007489387.1| - 0.45 9.5 1.7 0.56 9.2 0.2 1.8 2 0 0 2 2 2 0 Tetraacyldisaccharide-1-P 4'-kinase ATP-grasp_3 PF02655.14 gi|452209274|ref|YP_007489388.1| - 6e-47 159.7 0.0 7.6e-47 159.3 0.0 1.1 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|452209274|ref|YP_007489388.1| - 1.6e-11 44.1 0.0 9.7e-11 41.6 0.0 2.1 1 1 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATPgrasp_Ter PF15632.6 gi|452209274|ref|YP_007489388.1| - 1.8e-08 34.2 0.0 8.8e-08 32.0 0.0 1.9 1 1 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon Dala_Dala_lig_C PF07478.13 gi|452209274|ref|YP_007489388.1| - 1.9e-07 30.8 0.0 1.8e-06 27.7 0.0 2.0 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus RimK PF08443.11 gi|452209274|ref|YP_007489388.1| - 6.4e-07 29.2 0.0 2.2e-06 27.4 0.0 1.7 1 1 0 1 1 1 1 RimK-like ATP-grasp domain ATP-grasp_4 PF13535.6 gi|452209274|ref|YP_007489388.1| - 0.00011 21.9 0.0 0.0002 21.0 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.19 gi|452209274|ref|YP_007489388.1| - 0.00064 19.5 0.0 0.27 11.0 0.0 2.2 2 0 0 2 2 2 2 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATPgrasp_ST PF14397.6 gi|452209274|ref|YP_007489388.1| - 0.00072 18.9 0.0 0.0023 17.2 0.0 1.7 2 0 0 2 2 2 1 Sugar-transfer associated ATP-grasp ATP-grasp PF02222.22 gi|452209274|ref|YP_007489388.1| - 0.0014 18.3 0.0 0.0055 16.3 0.0 1.8 1 1 0 1 1 1 1 ATP-grasp domain TFIIE_alpha PF02002.17 gi|452209275|ref|YP_007489389.1| - 0.0019 18.0 0.1 0.0023 17.8 0.1 1.3 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_23 PF13384.6 gi|452209275|ref|YP_007489389.1| - 0.059 13.2 0.0 0.079 12.8 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain ACC_epsilon PF13822.6 gi|452209275|ref|YP_007489389.1| - 0.096 13.4 0.0 0.15 12.7 0.0 1.3 1 0 0 1 1 1 0 Acyl-CoA carboxylase epsilon subunit HD PF01966.22 gi|452209276|ref|YP_007489390.1| - 9.7e-16 58.1 2.1 1.5e-15 57.5 2.1 1.3 1 0 0 1 1 1 1 HD domain HD_2 PF12917.7 gi|452209276|ref|YP_007489390.1| - 0.00022 21.0 0.6 0.00031 20.5 0.6 1.4 1 1 0 1 1 1 1 HD containing hydrolase-like enzyme DUF4033 PF13225.6 gi|452209276|ref|YP_007489390.1| - 0.14 12.2 0.0 0.3 11.1 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4033) CmcI PF04989.12 gi|452209276|ref|YP_007489390.1| - 0.19 11.4 0.3 21 4.7 0.1 2.7 2 1 1 3 3 3 0 Cephalosporin hydroxylase Proteasome PF00227.26 gi|452209277|ref|YP_007489391.1| - 5.8e-56 189.0 1.3 6.6e-56 188.8 1.3 1.0 1 0 0 1 1 1 1 Proteasome subunit DUF4191 PF13829.6 gi|452209277|ref|YP_007489391.1| - 0.093 12.1 0.1 0.14 11.5 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) KH_7 PF17214.3 gi|452209278|ref|YP_007489392.1| - 1.1e-28 99.0 1.3 1.7e-27 95.1 0.1 2.9 2 0 0 2 2 2 1 KH domain Beta-Casp PF10996.8 gi|452209278|ref|YP_007489392.1| - 3.2e-26 91.8 0.0 9.3e-26 90.3 0.0 1.8 1 0 0 1 1 1 1 Beta-Casp domain Lactamase_B PF00753.27 gi|452209278|ref|YP_007489392.1| - 5.1e-15 56.0 0.4 2.4e-13 50.5 0.4 3.0 2 1 0 2 2 2 1 Metallo-beta-lactamase superfamily RMMBL PF07521.12 gi|452209278|ref|YP_007489392.1| - 1.1e-14 54.0 0.0 2.8e-14 52.8 0.0 1.7 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_6 PF16661.5 gi|452209278|ref|YP_007489392.1| - 1.7e-13 50.5 0.0 2.8e-13 49.7 0.0 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|452209278|ref|YP_007489392.1| - 1.4e-10 41.0 0.1 3e-10 39.9 0.1 1.6 1 0 0 1 1 1 1 Beta-lactamase superfamily domain KH_2 PF07650.17 gi|452209278|ref|YP_007489392.1| - 1e-05 25.2 0.6 8.9e-05 22.2 0.2 2.8 3 0 0 3 3 3 1 KH domain Lactamase_B_3 PF13483.6 gi|452209278|ref|YP_007489392.1| - 3.9e-05 23.6 0.0 0.00012 22.0 0.0 1.8 2 0 0 2 2 2 1 Beta-lactamase superfamily domain KH_1 PF00013.29 gi|452209278|ref|YP_007489392.1| - 0.0068 16.2 2.2 0.071 12.9 0.4 2.7 2 0 0 2 2 2 1 KH domain KH_4 PF13083.6 gi|452209278|ref|YP_007489392.1| - 0.013 15.3 0.0 0.033 14.0 0.0 1.7 1 0 0 1 1 1 0 KH domain DUF3489 PF11994.8 gi|452209278|ref|YP_007489392.1| - 0.12 12.5 0.0 0.27 11.3 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3489) HAD_2 PF13419.6 gi|452209279|ref|YP_007489393.1| - 4.1e-30 105.2 0.0 5.1e-30 104.9 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|452209279|ref|YP_007489393.1| - 3.1e-15 57.1 0.0 1.9e-14 54.5 0.0 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|452209279|ref|YP_007489393.1| - 0.0015 18.9 0.0 0.002 18.6 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|452209279|ref|YP_007489393.1| - 0.05 13.7 0.0 0.1 12.7 0.0 1.4 1 0 0 1 1 1 0 HAD-hyrolase-like Tubulin PF00091.25 gi|452209280|ref|YP_007489394.1| - 9.9e-38 130.3 0.1 1.7e-37 129.5 0.1 1.4 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 gi|452209280|ref|YP_007489394.1| - 3.5e-34 117.0 2.4 7.5e-34 115.9 0.2 2.6 3 1 0 3 3 3 1 FtsZ family, C-terminal domain TrkA_N PF02254.18 gi|452209280|ref|YP_007489394.1| - 0.28 11.4 1.6 1.5 9.1 0.2 2.8 3 1 0 3 3 3 0 TrkA-N domain Tubulin_2 PF13809.6 gi|452209280|ref|YP_007489394.1| - 2.2 7.4 6.9 4.1 6.5 2.5 2.2 1 1 0 2 2 2 0 Tubulin like DUF4346 PF14251.6 gi|452209281|ref|YP_007489395.1| - 4.5e-10 39.6 0.0 1.1e-09 38.3 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4346) Pterin_bind PF00809.22 gi|452209281|ref|YP_007489395.1| - 2e-09 37.5 0.8 1.9e-08 34.3 0.7 2.6 1 1 0 1 1 1 1 Pterin binding enzyme CdhD PF03599.16 gi|452209281|ref|YP_007489395.1| - 1.7e-05 23.8 0.0 7.1e-05 21.7 0.0 1.8 2 0 0 2 2 2 1 CO dehydrogenase/acetyl-CoA synthase delta subunit DUF561 PF04481.12 gi|452209281|ref|YP_007489395.1| - 0.047 12.8 0.1 0.077 12.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF561) PBECR5 PF18814.1 gi|452209282|ref|YP_007489396.1| - 0.062 13.2 0.1 0.082 12.8 0.1 1.1 1 0 0 1 1 1 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5 H_PPase PF03030.16 gi|452209286|ref|YP_007489400.1| - 4.4e-261 868.2 56.4 4.9e-261 868.0 56.4 1.0 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase DUF1980 PF09323.10 gi|452209286|ref|YP_007489400.1| - 0.43 10.5 1.5 32 4.4 0.0 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF1980) TM140 PF14985.6 gi|452209286|ref|YP_007489400.1| - 4.7 6.7 8.1 5.8 6.4 0.8 2.7 2 0 0 2 2 2 0 TM140 protein family MFS_1 PF07690.16 gi|452209289|ref|YP_007489403.1| - 1.3e-34 119.7 38.9 7.6e-27 94.2 33.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|452209289|ref|YP_007489403.1| - 1.2e-06 27.7 5.7 1.2e-06 27.7 5.7 3.3 2 2 2 4 4 4 2 Sugar (and other) transporter MFS_3 PF05977.13 gi|452209289|ref|YP_007489403.1| - 0.00057 18.4 0.7 0.00057 18.4 0.7 2.1 2 0 0 2 2 2 1 Transmembrane secretion effector MFS_1 PF07690.16 gi|452209290|ref|YP_007489404.1| - 6.1e-34 117.5 40.3 1.5e-25 89.9 9.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 gi|452209290|ref|YP_007489404.1| - 5.4e-08 32.5 0.8 5.4e-08 32.5 0.8 2.6 2 1 1 3 3 3 1 Uncharacterised MFS-type transporter YbfB PUA PF01472.20 gi|452209291|ref|YP_007489405.1| - 4.1e-20 71.5 0.9 6.3e-20 70.9 0.9 1.3 1 0 0 1 1 1 1 PUA domain UPF0113 PF03657.13 gi|452209291|ref|YP_007489405.1| - 0.00022 21.4 0.0 0.00036 20.7 0.0 1.3 1 0 0 1 1 1 1 UPF0113 PUA domain Pre-PUA PF17832.1 gi|452209291|ref|YP_007489405.1| - 0.001 19.7 0.2 0.0028 18.3 0.2 1.7 1 1 0 1 1 1 1 Pre-PUA-like domain KH_2 PF07650.17 gi|452209291|ref|YP_007489405.1| - 0.0019 18.0 1.0 1.9 8.4 0.1 2.7 2 1 0 2 2 2 2 KH domain DUF1947 PF09183.10 gi|452209291|ref|YP_007489405.1| - 0.008 16.5 0.1 0.018 15.3 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1947) SepF PF04472.12 gi|452209292|ref|YP_007489406.1| - 3.9e-13 49.5 1.7 5.9e-13 48.9 1.7 1.3 1 0 0 1 1 1 1 Cell division protein SepF Transposase_31 PF04754.12 gi|452209292|ref|YP_007489406.1| - 0.018 14.7 0.1 0.026 14.1 0.1 1.3 1 1 0 1 1 1 0 Putative transposase, YhgA-like zf-ZPR1 PF03367.13 gi|452209293|ref|YP_007489407.1| - 5.2e-37 127.1 0.0 6.7e-37 126.8 0.0 1.1 1 0 0 1 1 1 1 ZPR1 zinc-finger domain Prok-RING_4 PF14447.6 gi|452209293|ref|YP_007489407.1| - 0.0042 16.9 0.4 0.0088 15.9 0.4 1.5 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 Nse4-Nse3_bdg PF15412.6 gi|452209293|ref|YP_007489407.1| - 0.034 14.2 0.1 0.073 13.2 0.1 1.6 1 0 0 1 1 1 0 Binding domain of Nse4/EID3 to Nse3-MAGE tRNA-synt_2b PF00587.25 gi|452209295|ref|YP_007489409.1| - 1.3e-27 96.9 0.0 2e-27 96.3 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 gi|452209295|ref|YP_007489409.1| - 9e-21 73.8 0.9 1.4e-20 73.3 0.2 1.7 2 0 0 2 2 2 1 Anticodon binding domain ProRS-C_1 PF09180.11 gi|452209295|ref|YP_007489409.1| - 3.7e-16 59.1 0.6 1.4e-15 57.3 0.1 2.1 2 0 0 2 2 2 1 Prolyl-tRNA synthetase, C-terminal TIR_2 PF13676.6 gi|452209295|ref|YP_007489409.1| - 0.066 13.8 0.0 0.27 11.8 0.0 2.1 1 0 0 1 1 1 0 TIR domain DUF4145 PF13643.6 gi|452209295|ref|YP_007489409.1| - 0.15 12.2 0.0 0.34 11.1 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4145) DBI_PRT PF02277.17 gi|452209296|ref|YP_007489410.1| - 0.00095 18.5 1.7 0.0014 17.9 1.7 1.2 1 0 0 1 1 1 1 Phosphoribosyltransferase DUF1664 PF07889.12 gi|452209297|ref|YP_007489411.1| - 0.0077 16.3 0.1 0.008 16.2 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) DUF3587 PF12132.8 gi|452209297|ref|YP_007489411.1| - 0.11 11.9 0.9 0.12 11.8 0.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3587) DUF1670 PF07900.11 gi|452209298|ref|YP_007489412.1| - 6.6e-58 195.7 0.2 8.3e-58 195.3 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1670) HTH_29 PF13551.6 gi|452209298|ref|YP_007489412.1| - 9.2e-05 22.4 0.0 1.6 8.8 0.0 3.2 1 1 2 3 3 3 2 Winged helix-turn helix HTH_DeoR PF08220.12 gi|452209298|ref|YP_007489412.1| - 0.00015 21.4 0.1 0.00036 20.2 0.1 1.6 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_23 PF13384.6 gi|452209298|ref|YP_007489412.1| - 0.00062 19.5 0.9 0.37 10.6 0.1 2.7 2 1 1 3 3 3 2 Homeodomain-like domain AbiEi_4 PF13338.6 gi|452209298|ref|YP_007489412.1| - 0.04 14.1 0.0 0.087 13.0 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin HTH_Crp_2 PF13545.6 gi|452209298|ref|YP_007489412.1| - 0.12 12.4 1.0 0.44 10.6 0.1 2.1 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain Sigma70_ECF PF07638.11 gi|452209298|ref|YP_007489412.1| - 0.12 12.2 0.0 6.1 6.7 0.0 2.4 2 1 0 2 2 2 0 ECF sigma factor HTH_11 PF08279.12 gi|452209298|ref|YP_007489412.1| - 0.16 11.9 1.9 0.29 11.1 0.2 2.2 2 0 0 2 2 2 0 HTH domain HTH_7 PF02796.15 gi|452209298|ref|YP_007489412.1| - 1.2 9.3 4.7 18 5.5 0.1 3.3 2 1 1 3 3 3 0 Helix-turn-helix domain of resolvase DUF1670 PF07900.11 gi|452209299|ref|YP_007489413.1| - 5e-50 169.9 0.4 5.8e-50 169.7 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1670) DeoC PF01791.9 gi|452209301|ref|YP_007489415.1| - 3.1e-60 203.7 0.0 3.7e-60 203.5 0.0 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase PK PF00224.21 gi|452209302|ref|YP_007489416.1| - 1.5e-123 412.2 1.9 1.9e-123 411.8 1.9 1.1 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 gi|452209302|ref|YP_007489416.1| - 1.8e-24 86.2 0.0 6.7e-24 84.4 0.0 2.0 2 0 0 2 2 2 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.14 gi|452209302|ref|YP_007489416.1| - 2.5e-05 23.5 1.4 5.9e-05 22.3 1.1 1.7 1 1 1 2 2 2 1 HpcH/HpaI aldolase/citrate lyase family DAO PF01266.24 gi|452209305|ref|YP_007489419.1| - 3.7e-14 53.1 2.9 1.4e-06 28.1 0.3 2.2 1 1 1 2 2 2 2 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|452209305|ref|YP_007489419.1| - 1.4e-10 41.0 3.8 9.3e-05 21.8 0.0 2.5 3 0 0 3 3 3 2 FAD binding domain FAD_oxidored PF12831.7 gi|452209305|ref|YP_007489419.1| - 3.1e-10 40.0 0.3 8.8e-10 38.5 0.3 1.7 1 1 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|452209305|ref|YP_007489419.1| - 1e-08 34.4 1.3 3e-08 32.8 0.2 2.0 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox_2 PF07992.14 gi|452209305|ref|YP_007489419.1| - 3.2e-07 29.9 1.0 2e-06 27.3 1.0 2.1 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|452209305|ref|YP_007489419.1| - 3.5e-07 29.7 1.4 3.6e-07 29.6 0.2 1.6 2 0 0 2 2 2 1 FAD binding domain NAD_binding_8 PF13450.6 gi|452209305|ref|YP_007489419.1| - 4.7e-07 30.0 0.2 1.5e-06 28.3 0.1 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Lycopene_cycl PF05834.12 gi|452209305|ref|YP_007489419.1| - 6.5e-07 28.7 1.5 0.01 14.9 0.1 2.4 2 1 0 2 2 2 2 Lycopene cyclase protein GIDA PF01134.22 gi|452209305|ref|YP_007489419.1| - 1.4e-06 27.7 2.7 4.4e-06 26.0 2.7 1.8 1 1 0 1 1 1 1 Glucose inhibited division protein A Thi4 PF01946.17 gi|452209305|ref|YP_007489419.1| - 3.7e-05 23.1 0.1 9.6e-05 21.7 0.0 1.7 2 0 0 2 2 2 1 Thi4 family Trp_halogenase PF04820.14 gi|452209305|ref|YP_007489419.1| - 0.00024 20.1 0.5 0.044 12.6 0.2 2.2 1 1 0 2 2 2 2 Tryptophan halogenase Pyr_redox_3 PF13738.6 gi|452209305|ref|YP_007489419.1| - 0.00037 19.9 0.4 0.0044 16.3 0.1 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|452209305|ref|YP_007489419.1| - 0.0039 16.5 0.2 0.014 14.7 0.1 2.0 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox PF00070.27 gi|452209305|ref|YP_007489419.1| - 0.0045 17.5 0.3 0.25 12.0 0.0 2.7 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 gi|452209305|ref|YP_007489419.1| - 0.015 15.2 0.0 0.12 12.2 0.1 2.3 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VbhA PF18495.1 gi|452209305|ref|YP_007489419.1| - 0.16 11.9 0.4 0.34 10.8 0.4 1.5 1 0 0 1 1 1 0 Antitoxin VbhA Fer4_NifH PF00142.18 gi|452209306|ref|YP_007489420.1| - 1.4e-126 421.5 1.3 1.6e-126 421.3 1.3 1.0 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CbiA PF01656.23 gi|452209306|ref|YP_007489420.1| - 1.2e-13 51.2 0.0 6.4e-13 48.9 0.0 2.0 1 1 1 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|452209306|ref|YP_007489420.1| - 7.4e-11 42.3 1.0 7.3e-10 39.0 0.3 2.2 2 0 0 2 2 2 1 AAA domain ParA PF10609.9 gi|452209306|ref|YP_007489420.1| - 6.2e-08 32.4 0.4 2.3e-06 27.2 0.3 2.2 2 0 0 2 2 2 1 NUBPL iron-transfer P-loop NTPase ArsA_ATPase PF02374.15 gi|452209306|ref|YP_007489420.1| - 3.1e-06 26.6 0.3 6.2e-06 25.6 0.3 1.5 1 0 0 1 1 1 1 Anion-transporting ATPase MeaB PF03308.16 gi|452209306|ref|YP_007489420.1| - 0.00063 18.8 0.3 0.00086 18.4 0.3 1.3 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB CBP_BcsQ PF06564.12 gi|452209306|ref|YP_007489420.1| - 0.0014 18.1 0.2 0.14 11.6 0.2 2.1 2 0 0 2 2 2 1 Cellulose biosynthesis protein BcsQ AAA_24 PF13479.6 gi|452209306|ref|YP_007489420.1| - 0.0033 17.2 0.1 0.0061 16.3 0.1 1.4 1 0 0 1 1 1 1 AAA domain MipZ PF09140.11 gi|452209306|ref|YP_007489420.1| - 0.0056 16.0 0.3 0.035 13.4 0.1 2.0 2 0 0 2 2 2 1 ATPase MipZ SRP54 PF00448.22 gi|452209306|ref|YP_007489420.1| - 0.0086 15.7 0.4 0.017 14.8 0.4 1.5 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain RNA_helicase PF00910.22 gi|452209306|ref|YP_007489420.1| - 0.012 16.0 0.2 0.038 14.4 0.1 1.9 2 0 0 2 2 2 0 RNA helicase DUF87 PF01935.17 gi|452209306|ref|YP_007489420.1| - 0.056 13.5 0.3 0.11 12.6 0.1 1.5 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_22 PF13401.6 gi|452209306|ref|YP_007489420.1| - 0.066 13.5 0.1 0.22 11.8 0.1 1.8 2 0 0 2 2 2 0 AAA domain AAA_10 PF12846.7 gi|452209306|ref|YP_007489420.1| - 0.068 12.1 0.1 0.1 11.5 0.1 1.3 1 0 0 1 1 1 0 AAA-like domain CLP1_P PF16575.5 gi|452209306|ref|YP_007489420.1| - 0.14 11.9 0.1 0.3 10.8 0.1 1.5 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop ABC_tran PF00005.27 gi|452209306|ref|YP_007489420.1| - 0.18 12.3 0.6 0.28 11.7 0.2 1.5 2 0 0 2 2 1 0 ABC transporter AAA_25 PF13481.6 gi|452209306|ref|YP_007489420.1| - 0.18 11.3 0.1 0.31 10.6 0.1 1.3 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|452209306|ref|YP_007489420.1| - 0.21 12.0 0.1 0.43 10.9 0.0 1.5 2 0 0 2 2 1 0 AAA ATPase domain P-II PF00543.22 gi|452209307|ref|YP_007489421.1| - 1.5e-30 105.8 0.8 1.7e-30 105.7 0.8 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II MEKHLA PF08670.11 gi|452209307|ref|YP_007489421.1| - 0.049 13.5 0.0 0.064 13.2 0.0 1.1 1 0 0 1 1 1 0 MEKHLA domain P-II PF00543.22 gi|452209308|ref|YP_007489422.1| - 2.5e-32 111.5 0.0 3.5e-32 111.0 0.0 1.2 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II Oxidored_nitro PF00148.19 gi|452209309|ref|YP_007489423.1| - 3.8e-137 457.3 0.2 5.4e-137 456.8 0.2 1.2 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Thioredoxin_6 PF13848.6 gi|452209309|ref|YP_007489423.1| - 0.048 13.6 0.1 0.12 12.2 0.1 1.7 1 0 0 1 1 1 0 Thioredoxin-like domain Oxidored_nitro PF00148.19 gi|452209310|ref|YP_007489424.1| - 2.9e-127 424.7 0.0 3.3e-127 424.5 0.0 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Oxidored_nitro PF00148.19 gi|452209311|ref|YP_007489425.1| - 2.5e-49 168.1 0.1 2.8e-49 167.9 0.1 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase DUF5612 PF18462.1 gi|452209311|ref|YP_007489425.1| - 0.044 13.6 0.0 0.071 12.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5612) SBP_bac_11 PF13531.6 gi|452209312|ref|YP_007489426.1| - 1.2e-11 44.8 0.0 1.3e-11 44.7 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|452209312|ref|YP_007489426.1| - 3.6e-06 27.1 0.0 3.9e-06 27.0 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 gi|452209312|ref|YP_007489426.1| - 3e-05 23.6 0.0 3e-05 23.6 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 gi|452209312|ref|YP_007489426.1| - 0.011 15.6 0.0 0.013 15.4 0.0 1.1 1 0 0 1 1 1 0 Bacterial extracellular solute-binding protein ABC_tran PF00005.27 gi|452209313|ref|YP_007489427.1| - 2.6e-14 53.9 0.0 5.1e-14 53.0 0.0 1.5 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 gi|452209313|ref|YP_007489427.1| - 1.1e-06 28.7 0.0 2.8e-06 27.4 0.0 1.7 2 0 0 2 2 2 1 TOBE domain AAA_21 PF13304.6 gi|452209313|ref|YP_007489427.1| - 3.2e-06 27.2 0.0 4.8e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system OB_MalK PF17912.1 gi|452209313|ref|YP_007489427.1| - 0.063 14.1 0.0 0.38 11.6 0.0 2.3 2 1 0 2 2 2 0 MalK OB fold domain SbcCD_C PF13558.6 gi|452209313|ref|YP_007489427.1| - 0.069 13.4 0.5 0.81 10.0 0.5 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit SMC_N PF02463.19 gi|452209313|ref|YP_007489427.1| - 0.17 11.3 0.0 0.34 10.3 0.0 1.5 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain sCache_2 PF17200.4 gi|452209314|ref|YP_007489428.1| - 2e-51 173.9 7.0 7.3e-23 81.1 0.1 3.5 3 0 0 3 3 3 3 Single Cache domain 2 SBP_bac_3 PF00497.20 gi|452209314|ref|YP_007489428.1| - 6.1e-47 159.9 2.0 3.7e-25 88.7 0.5 2.3 2 0 0 2 2 2 2 Bacterial extracellular solute-binding proteins, family 3 dCache_2 PF08269.11 gi|452209314|ref|YP_007489428.1| - 5.5e-44 150.5 7.0 8.9e-18 64.5 0.0 4.0 3 1 1 4 4 4 3 Cache domain sCache_3_2 PF17203.4 gi|452209314|ref|YP_007489428.1| - 0.0014 18.8 0.0 2.5 8.2 0.0 3.6 3 0 0 3 3 3 1 Single cache domain 3 DctP PF03480.13 gi|452209314|ref|YP_007489428.1| - 0.0051 16.2 0.1 0.53 9.6 0.0 2.8 3 0 0 3 3 3 1 Bacterial extracellular solute-binding protein, family 7 Cache_3-Cache_2 PF17201.4 gi|452209314|ref|YP_007489428.1| - 0.0057 16.0 0.4 0.2 10.9 0.0 2.9 3 0 0 3 3 3 1 Cache 3/Cache 2 fusion domain Methyltransf_11 PF08241.12 gi|452209315|ref|YP_007489429.1| - 5.6e-23 81.4 0.0 1.1e-22 80.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|452209315|ref|YP_007489429.1| - 1.6e-22 80.0 0.0 3.6e-22 78.9 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|452209315|ref|YP_007489429.1| - 4.3e-22 78.6 0.0 6.3e-22 78.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|452209315|ref|YP_007489429.1| - 4e-17 62.3 0.0 1.7e-16 60.3 0.0 1.8 1 1 1 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|452209315|ref|YP_007489429.1| - 7e-16 58.8 0.0 1.1e-15 58.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|452209315|ref|YP_007489429.1| - 2.7e-12 46.9 0.0 1.5e-11 44.4 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|452209315|ref|YP_007489429.1| - 1.3e-09 37.8 0.0 6.2e-09 35.6 0.0 1.9 2 0 0 2 2 2 1 Putative methyltransferase MTS PF05175.14 gi|452209315|ref|YP_007489429.1| - 3.1e-08 33.3 0.0 5.5e-08 32.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_2 PF00891.18 gi|452209315|ref|YP_007489429.1| - 6.9e-06 25.5 0.1 6.7e-05 22.3 0.1 2.1 1 1 0 1 1 1 1 O-methyltransferase domain Methyltransf_18 PF12847.7 gi|452209315|ref|YP_007489429.1| - 1.1e-05 25.5 0.0 1.9e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 gi|452209315|ref|YP_007489429.1| - 2.4e-05 24.4 0.0 3.5e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|452209315|ref|YP_007489429.1| - 2.7e-05 23.6 0.0 4.1e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_8 PF05148.15 gi|452209315|ref|YP_007489429.1| - 0.00018 21.4 0.0 0.0011 18.8 0.0 1.9 1 1 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_9 PF08003.11 gi|452209315|ref|YP_007489429.1| - 0.00046 19.2 0.0 0.00065 18.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) PrmA PF06325.13 gi|452209315|ref|YP_007489429.1| - 0.0011 18.4 0.0 0.0018 17.7 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_29 PF03141.16 gi|452209315|ref|YP_007489429.1| - 0.0014 17.3 0.0 0.0019 16.8 0.0 1.1 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase PCMT PF01135.19 gi|452209315|ref|YP_007489429.1| - 0.0017 18.1 0.0 0.0028 17.4 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) UPF0020 PF01170.18 gi|452209315|ref|YP_007489429.1| - 0.047 13.4 0.0 0.19 11.4 0.0 1.9 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 P-II PF00543.22 gi|452209316|ref|YP_007489430.1| - 1.1e-31 109.4 0.1 1.3e-31 109.2 0.1 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II Ammonium_transp PF00909.21 gi|452209317|ref|YP_007489431.1| - 2.2e-118 395.4 39.9 2.5e-118 395.2 39.9 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family CD99L2 PF12301.8 gi|452209317|ref|YP_007489431.1| - 0.045 14.0 0.4 0.09 13.1 0.4 1.4 1 0 0 1 1 1 0 CD99 antigen like protein 2 Wyosine_form PF08608.12 gi|452209318|ref|YP_007489432.1| - 0.026 14.9 0.0 0.042 14.2 0.0 1.3 1 0 0 1 1 1 0 Wyosine base formation SipA_VBS PF17985.1 gi|452209318|ref|YP_007489432.1| - 0.12 12.3 0.0 0.35 10.9 0.0 1.8 1 0 0 1 1 1 0 SipA vinculin binding site UPF0060 PF02694.15 gi|452209319|ref|YP_007489433.1| - 1.4e-12 47.7 0.8 1.7e-12 47.5 0.8 1.2 1 0 0 1 1 1 1 Uncharacterised BCR, YnfA/UPF0060 family ArsP_1 PF03773.13 gi|452209320|ref|YP_007489434.1| - 1.1e-84 284.1 27.6 1.3e-84 283.9 27.6 1.0 1 0 0 1 1 1 1 Predicted permease UPF0542 PF15086.6 gi|452209320|ref|YP_007489434.1| - 0.91 9.5 7.8 38 4.3 0.3 3.6 3 0 0 3 3 3 0 Uncharacterised protein family UPF0542 Thioredoxin_3 PF13192.6 gi|452209321|ref|YP_007489435.1| - 5.2e-30 103.3 1.4 5.7e-30 103.2 1.4 1.0 1 0 0 1 1 1 1 Thioredoxin domain Glutaredoxin PF00462.24 gi|452209321|ref|YP_007489435.1| - 0.00023 21.3 0.4 0.00045 20.4 0.4 1.5 1 1 0 1 1 1 1 Glutaredoxin Thioredoxin_4 PF13462.6 gi|452209321|ref|YP_007489435.1| - 0.016 15.4 1.0 0.12 12.5 0.1 1.9 1 1 1 2 2 2 0 Thioredoxin DUF1611 PF07755.11 gi|452209321|ref|YP_007489435.1| - 0.046 13.0 0.2 0.048 12.9 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF1611_C) P-loop domain ArsD PF06953.11 gi|452209321|ref|YP_007489435.1| - 0.075 13.4 0.0 0.13 12.7 0.0 1.4 1 1 0 1 1 1 0 Arsenical resistance operon trans-acting repressor ArsD DGC PF08859.11 gi|452209322|ref|YP_007489436.1| - 2.5e-35 120.8 0.5 3e-35 120.5 0.5 1.1 1 0 0 1 1 1 1 DGC domain SAM_LFY PF01698.16 gi|452209322|ref|YP_007489436.1| - 0.041 13.8 0.0 3.3 7.7 0.0 2.1 2 0 0 2 2 2 0 Floricaula / Leafy protein SAM domain zf-IS66 PF13005.7 gi|452209323|ref|YP_007489437.1| - 8.8e-11 42.0 6.7 1.6e-10 41.2 6.7 1.4 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 zinc_ribbon_15 PF17032.5 gi|452209323|ref|YP_007489437.1| - 0.02 15.6 4.2 0.029 15.1 4.1 1.6 1 1 0 1 1 1 0 zinc-ribbon family zf-ISL3 PF14690.6 gi|452209323|ref|YP_007489437.1| - 0.02 15.5 2.5 5.9 7.6 0.4 2.5 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NADase_NGA PF07461.11 gi|452209323|ref|YP_007489437.1| - 0.026 13.4 1.3 0.033 13.1 1.3 1.1 1 0 0 1 1 1 0 Nicotine adenine dinucleotide glycohydrolase (NADase) Mut7-C PF01927.16 gi|452209323|ref|YP_007489437.1| - 0.38 10.8 4.4 1.4 9.0 3.8 1.8 2 0 0 2 2 2 0 Mut7-C RNAse domain Lar_restr_allev PF14354.6 gi|452209323|ref|YP_007489437.1| - 0.99 9.8 7.3 0.83 10.1 1.7 2.3 2 1 0 2 2 2 0 Restriction alleviation protein Lar Usp PF00582.26 gi|452209325|ref|YP_007489439.1| - 7.7e-40 136.7 0.2 1.7e-20 74.0 0.0 2.3 2 0 0 2 2 2 2 Universal stress protein family SBF PF01758.16 gi|452209326|ref|YP_007489440.1| - 5.8e-46 156.6 23.4 5.8e-46 156.6 23.4 2.4 2 1 0 2 2 2 1 Sodium Bile acid symporter family DUF4179 PF13786.6 gi|452209326|ref|YP_007489440.1| - 0.91 10.0 5.0 11 6.6 0.6 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4179) CMD PF02627.20 gi|452209327|ref|YP_007489441.1| - 8.5e-24 83.4 0.1 1.1e-23 83.1 0.1 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Methyltransf_25 PF13649.6 gi|452209329|ref|YP_007489443.1| - 9.5e-16 58.3 0.0 2.1e-15 57.2 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|452209329|ref|YP_007489443.1| - 3e-15 56.6 0.0 6.2e-15 55.6 0.0 1.5 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|452209329|ref|YP_007489443.1| - 2.8e-14 53.6 0.0 5.3e-14 52.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|452209329|ref|YP_007489443.1| - 2.4e-12 46.7 0.1 8.2e-12 45.0 0.0 1.7 2 0 0 2 2 2 1 Mycolic acid cyclopropane synthetase Methyltransf_31 PF13847.6 gi|452209329|ref|YP_007489443.1| - 1.7e-11 44.2 0.0 2.4e-11 43.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|452209329|ref|YP_007489443.1| - 4.1e-11 43.0 0.0 5.3e-11 42.6 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|452209329|ref|YP_007489443.1| - 3e-10 39.9 0.0 4.3e-10 39.3 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family TehB PF03848.14 gi|452209329|ref|YP_007489443.1| - 1.2e-05 24.8 0.0 1.6e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB MTS PF05175.14 gi|452209329|ref|YP_007489443.1| - 2.1e-05 24.1 0.0 3.8e-05 23.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain NodS PF05401.11 gi|452209329|ref|YP_007489443.1| - 0.0018 17.9 0.0 0.0025 17.5 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) PCMT PF01135.19 gi|452209329|ref|YP_007489443.1| - 0.0019 18.0 0.0 0.0026 17.5 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_PK PF05891.12 gi|452209329|ref|YP_007489443.1| - 0.0049 16.4 0.0 0.0072 15.9 0.0 1.1 1 0 0 1 1 1 1 AdoMet dependent proline di-methyltransferase Pox_MCEL PF03291.16 gi|452209329|ref|YP_007489443.1| - 0.0055 15.9 0.0 0.024 13.8 0.0 1.9 1 1 0 1 1 1 1 mRNA capping enzyme Methyltransf_2 PF00891.18 gi|452209329|ref|YP_007489443.1| - 0.013 14.8 0.0 0.024 13.9 0.0 1.4 1 0 0 1 1 1 0 O-methyltransferase domain PrmA PF06325.13 gi|452209329|ref|YP_007489443.1| - 0.014 14.8 0.0 0.02 14.3 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_4 PF02390.17 gi|452209329|ref|YP_007489443.1| - 0.015 14.8 0.0 0.058 12.9 0.0 1.8 1 1 1 2 2 2 0 Putative methyltransferase TPMT PF05724.11 gi|452209329|ref|YP_007489443.1| - 0.067 12.8 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) CMD PF02627.20 gi|452209331|ref|YP_007489445.1| - 0.00061 19.8 0.1 0.00068 19.6 0.1 1.0 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family DEAD PF00270.29 gi|452209335|ref|YP_007489449.1| - 2.6e-49 167.4 0.2 7.5e-49 165.9 0.0 1.8 2 1 1 3 3 3 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|452209335|ref|YP_007489449.1| - 3.3e-31 107.9 1.9 1.1e-29 103.1 0.1 3.4 4 0 0 4 4 4 1 Helicase conserved C-terminal domain DbpA PF03880.15 gi|452209335|ref|YP_007489449.1| - 3.3e-11 43.0 0.1 2.6e-10 40.1 0.0 2.6 2 0 0 2 2 2 1 DbpA RNA binding domain ResIII PF04851.15 gi|452209335|ref|YP_007489449.1| - 2.5e-09 37.4 0.0 6.6e-09 36.0 0.0 1.7 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit CMS1 PF14617.6 gi|452209335|ref|YP_007489449.1| - 0.0014 18.0 0.1 0.0041 16.5 0.1 1.8 1 0 0 1 1 1 1 U3-containing 90S pre-ribosomal complex subunit ERCC3_RAD25_C PF16203.5 gi|452209335|ref|YP_007489449.1| - 0.002 17.4 0.0 0.0034 16.6 0.0 1.3 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase AAA_30 PF13604.6 gi|452209335|ref|YP_007489449.1| - 0.0086 15.8 0.0 0.02 14.6 0.0 1.6 1 0 0 1 1 1 1 AAA domain UvrD-helicase PF00580.21 gi|452209335|ref|YP_007489449.1| - 0.011 15.3 0.9 0.03 13.8 0.8 1.7 1 1 0 1 1 1 0 UvrD/REP helicase N-terminal domain Methyltransf_12 PF08242.12 gi|452209336|ref|YP_007489450.1| - 1.3e-17 64.4 0.0 2e-17 63.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|452209336|ref|YP_007489450.1| - 9.3e-14 51.9 0.0 1.6e-13 51.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|452209336|ref|YP_007489450.1| - 1.1e-10 42.0 0.0 1.7e-10 41.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|452209336|ref|YP_007489450.1| - 2.4e-08 33.9 0.0 2.9e-08 33.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|452209336|ref|YP_007489450.1| - 1.8e-07 31.1 0.0 2.4e-07 30.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|452209336|ref|YP_007489450.1| - 3.6e-07 29.8 0.0 5.3e-07 29.2 0.0 1.3 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family ResIII PF04851.15 gi|452209336|ref|YP_007489450.1| - 0.0061 16.6 0.0 0.007 16.4 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Methyltransf_5 PF01795.19 gi|452209336|ref|YP_007489450.1| - 0.023 14.2 0.0 0.033 13.7 0.0 1.2 1 0 0 1 1 1 0 MraW methylase family Methyltransf_2 PF00891.18 gi|452209336|ref|YP_007489450.1| - 0.028 13.7 0.0 0.035 13.4 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase domain CMAS PF02353.20 gi|452209336|ref|YP_007489450.1| - 0.09 12.0 0.0 0.12 11.6 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase ADH_N PF08240.12 gi|452209337|ref|YP_007489451.1| - 4e-27 94.3 0.2 6.4e-27 93.6 0.2 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_N_assoc PF13823.6 gi|452209337|ref|YP_007489451.1| - 5.1e-12 45.5 0.4 2.9e-11 43.1 0.9 2.1 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-associated Fer4_24 PF18109.1 gi|452209337|ref|YP_007489451.1| - 0.21 11.9 0.1 5.4 7.4 0.0 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain Hydantoinase_A PF01968.18 gi|452209338|ref|YP_007489452.1| - 7e-32 110.8 3.1 4.3e-31 108.3 0.3 2.9 3 1 0 3 3 3 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 gi|452209338|ref|YP_007489452.1| - 1.1e-29 103.5 1.3 2.3e-26 92.6 0.0 3.5 2 1 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.6 gi|452209338|ref|YP_007489452.1| - 8.2e-06 24.7 0.8 0.041 12.5 0.1 2.2 2 0 0 2 2 2 2 MutL protein ROK PF00480.20 gi|452209338|ref|YP_007489452.1| - 0.11 12.0 0.0 0.18 11.2 0.0 1.3 1 0 0 1 1 1 0 ROK family BcrAD_BadFG PF01869.20 gi|452209338|ref|YP_007489452.1| - 0.35 10.3 2.0 0.5 9.8 0.0 2.2 3 0 0 3 3 3 0 BadF/BadG/BcrA/BcrD ATPase family Metallophos_2 PF12850.7 gi|452209339|ref|YP_007489453.1| - 2.7e-19 70.0 0.0 3.9e-19 69.4 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|452209339|ref|YP_007489453.1| - 0.00014 22.4 0.0 0.00016 22.2 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|452209340|ref|YP_007489454.1| - 5.9e-29 101.4 0.1 6.7e-29 101.2 0.1 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|452209340|ref|YP_007489454.1| - 1.5e-09 38.7 0.6 4.5e-06 27.3 0.1 2.1 1 1 1 2 2 2 2 Calcineurin-like phosphoesterase Metallophos_3 PF14582.6 gi|452209340|ref|YP_007489454.1| - 0.005 16.2 0.5 0.36 10.1 0.1 2.2 1 1 1 2 2 2 2 Metallophosphoesterase, calcineurin superfamily QueC PF06508.13 gi|452209341|ref|YP_007489455.1| - 8e-60 201.9 0.0 9.2e-60 201.7 0.0 1.0 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.21 gi|452209341|ref|YP_007489455.1| - 7.7e-06 25.8 0.0 1.1e-05 25.2 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase ATP_bind_3 PF01171.20 gi|452209341|ref|YP_007489455.1| - 0.001 18.9 0.0 0.0029 17.4 0.0 1.7 2 0 0 2 2 2 1 PP-loop family ThiI PF02568.14 gi|452209341|ref|YP_007489455.1| - 0.0014 18.2 0.0 0.076 12.6 0.0 2.3 1 1 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) Fer2 PF00111.27 gi|452209341|ref|YP_007489455.1| - 0.081 12.9 0.2 0.15 12.1 0.2 1.4 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain tRNA_Me_trans PF03054.16 gi|452209341|ref|YP_007489455.1| - 0.12 11.2 0.1 0.37 9.5 0.0 1.7 2 0 0 2 2 2 0 tRNA methyl transferase NAD_synthase PF02540.17 gi|452209341|ref|YP_007489455.1| - 0.14 11.2 0.1 0.24 10.5 0.0 1.4 2 0 0 2 2 2 0 NAD synthase DUF366 PF04017.12 gi|452209342|ref|YP_007489456.1| - 2.8e-72 242.1 0.9 3.1e-72 241.9 0.9 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF366) Radical_SAM PF04055.21 gi|452209343|ref|YP_007489457.1| - 3.3e-13 50.3 0.1 5e-13 49.8 0.1 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|452209343|ref|YP_007489457.1| - 1.6e-08 34.7 0.0 3.1e-08 33.8 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|452209343|ref|YP_007489457.1| - 5.5e-07 29.9 0.0 8e-07 29.4 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain PTPS PF01242.19 gi|452209344|ref|YP_007489458.1| - 8.1e-27 93.6 0.0 1e-26 93.3 0.0 1.0 1 0 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase Radical_SAM PF04055.21 gi|452209345|ref|YP_007489459.1| - 3.2e-27 96.0 0.1 4.8e-27 95.4 0.1 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|452209345|ref|YP_007489459.1| - 2.6e-06 27.6 0.2 7e-06 26.2 0.0 1.8 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|452209345|ref|YP_007489459.1| - 0.00048 20.4 0.0 0.00097 19.4 0.0 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain DRY_EERY PF09750.9 gi|452209345|ref|YP_007489459.1| - 0.14 12.4 1.7 0.22 11.8 1.7 1.3 1 0 0 1 1 1 0 Alternative splicing regulator Fer4 PF00037.27 gi|452209347|ref|YP_007489461.1| - 8.2e-19 66.6 19.7 9.1e-10 37.9 6.1 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|452209347|ref|YP_007489461.1| - 1.4e-14 53.4 19.9 1.3e-07 31.4 5.9 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|452209347|ref|YP_007489461.1| - 1.1e-13 51.0 24.9 3.8e-10 39.7 14.1 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452209347|ref|YP_007489461.1| - 3.1e-13 48.9 15.7 9.5e-07 28.6 3.9 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|452209347|ref|YP_007489461.1| - 4.5e-12 45.9 10.4 5.9e-12 45.6 10.4 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|452209347|ref|YP_007489461.1| - 2.3e-11 44.1 12.2 4.7e-11 43.1 12.3 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|452209347|ref|YP_007489461.1| - 1.8e-10 40.5 11.9 5.6e-05 23.3 1.4 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|452209347|ref|YP_007489461.1| - 3.5e-10 39.8 12.7 4.4e-10 39.5 12.7 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452209347|ref|YP_007489461.1| - 6.7e-10 39.8 11.1 6.2e-05 23.8 2.6 2.1 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|452209347|ref|YP_007489461.1| - 7.9e-07 29.5 21.5 0.0049 17.4 2.2 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|452209347|ref|YP_007489461.1| - 1.4e-06 28.7 12.1 0.0003 21.2 12.1 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|452209347|ref|YP_007489461.1| - 1.9e-06 28.5 17.8 2.7e-05 24.8 4.6 2.4 1 1 1 2 2 2 2 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|452209347|ref|YP_007489461.1| - 2.4e-06 28.0 17.4 0.0021 18.5 5.2 2.2 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 gi|452209347|ref|YP_007489461.1| - 7.8e-06 26.5 19.5 0.0025 18.6 6.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_22 PF17179.4 gi|452209347|ref|YP_007489461.1| - 2e-05 25.3 7.5 0.0087 16.9 1.6 2.0 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_11 PF13247.6 gi|452209347|ref|YP_007489461.1| - 0.0011 19.0 5.1 0.0011 19.0 5.1 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|452209347|ref|YP_007489461.1| - 0.0054 16.9 13.8 0.033 14.4 13.9 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_19 PF06902.11 gi|452209347|ref|YP_007489461.1| - 0.073 13.2 5.7 0.099 12.7 5.7 1.3 1 1 0 1 1 1 0 Divergent 4Fe-4S mono-cluster Me-amine-dh_L PF02975.14 gi|452209347|ref|YP_007489461.1| - 3.6 8.1 11.7 7.3 7.1 2.8 2.0 1 1 1 2 2 2 0 Methylamine dehydrogenase, L chain AIRS PF00586.24 gi|452209348|ref|YP_007489462.1| - 1.5e-18 67.2 0.3 5.2e-18 65.5 0.8 1.6 2 0 0 2 2 2 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.22 gi|452209348|ref|YP_007489462.1| - 4.7e-16 59.3 0.0 8.1e-16 58.5 0.0 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain DUF1297 PF06973.12 gi|452209348|ref|YP_007489462.1| - 0.063 12.8 0.0 0.13 11.8 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1297) SH3_3 PF08239.11 gi|452209348|ref|YP_007489462.1| - 0.065 13.5 0.3 14 6.0 0.0 2.8 3 0 0 3 3 3 0 Bacterial SH3 domain DUF5611 PF18446.1 gi|452209350|ref|YP_007489464.1| - 4.1e-35 120.8 0.6 4.5e-35 120.6 0.6 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5611) Imm6 PF14434.6 gi|452209350|ref|YP_007489464.1| - 0.031 14.2 0.1 0.035 14.0 0.1 1.3 1 1 0 1 1 1 0 Immunity protein Imm6 DUF2553 PF10830.8 gi|452209350|ref|YP_007489464.1| - 0.11 13.4 0.2 0.29 12.0 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2553) DUF98 PF01947.16 gi|452209351|ref|YP_007489465.1| - 6.8e-17 61.8 0.0 8.2e-17 61.6 0.0 1.1 1 0 0 1 1 1 1 p-hydroxybenzoic acid synthase UTRA PF07702.13 gi|452209351|ref|YP_007489465.1| - 3.6e-06 26.9 0.1 5e-06 26.4 0.1 1.2 1 0 0 1 1 1 1 UTRA domain Chor_lyase PF04345.13 gi|452209351|ref|YP_007489465.1| - 0.0031 17.2 0.0 0.0037 16.9 0.0 1.1 1 0 0 1 1 1 1 Chorismate lyase TPR_2 PF07719.17 gi|452209352|ref|YP_007489466.1| - 9.3e-07 28.5 0.0 1.8e-06 27.6 0.0 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 gi|452209352|ref|YP_007489466.1| - 2.3e-05 24.0 0.0 4.7e-05 23.0 0.0 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat SHNi-TPR PF10516.9 gi|452209352|ref|YP_007489466.1| - 0.00094 18.6 0.0 0.0018 17.7 0.0 1.4 1 0 0 1 1 1 1 SHNi-TPR TPR_11 PF13414.6 gi|452209352|ref|YP_007489466.1| - 0.0041 16.8 0.0 0.0073 16.0 0.0 1.4 1 0 0 1 1 1 1 TPR repeat TPR_8 PF13181.6 gi|452209352|ref|YP_007489466.1| - 0.0073 16.4 0.0 0.021 15.0 0.0 1.7 1 0 0 1 1 1 1 Tetratricopeptide repeat YkuD_2 PF13645.6 gi|452209352|ref|YP_007489466.1| - 0.021 14.3 0.6 0.69 9.3 0.0 2.5 2 0 0 2 2 2 0 L,D-transpeptidase catalytic domain TPR_12 PF13424.6 gi|452209352|ref|YP_007489466.1| - 0.044 14.1 0.0 0.082 13.2 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_14 PF13428.6 gi|452209352|ref|YP_007489466.1| - 0.085 13.7 0.0 0.19 12.6 0.0 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_16 PF13432.6 gi|452209352|ref|YP_007489466.1| - 0.22 12.2 0.0 0.38 11.5 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF2175 PF09943.9 gi|452209354|ref|YP_007489468.1| - 0.003 17.8 2.2 0.025 14.9 0.4 2.4 2 1 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2175) DZR PF12773.7 gi|452209354|ref|YP_007489468.1| - 0.037 14.0 8.5 4.7 7.3 8.5 2.9 1 1 0 1 1 1 0 Double zinc ribbon Nudix_N_2 PF14803.6 gi|452209354|ref|YP_007489468.1| - 0.056 13.4 3.2 3.1 7.8 0.2 3.0 3 0 0 3 3 3 0 Nudix N-terminal zinc_ribbon_2 PF13240.6 gi|452209354|ref|YP_007489468.1| - 0.068 12.9 4.8 5.1 7.0 0.1 2.9 2 1 0 2 2 2 0 zinc-ribbon domain zf-NADH-PPase PF09297.11 gi|452209354|ref|YP_007489468.1| - 0.17 11.6 2.3 0.25 11.0 0.2 2.1 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain DUF2039 PF10217.9 gi|452209354|ref|YP_007489468.1| - 0.17 12.2 2.4 0.41 11.0 0.0 2.3 2 1 1 3 3 3 0 Uncharacterized conserved protein (DUF2039) A2L_zn_ribbon PF08792.10 gi|452209354|ref|YP_007489468.1| - 0.38 10.5 11.1 3.5 7.5 0.1 3.8 4 0 0 4 4 4 0 A2L zinc ribbon domain zf_UBZ PF18439.1 gi|452209354|ref|YP_007489468.1| - 0.42 10.3 0.1 0.42 10.3 0.1 2.8 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger NOB1_Zn_bind PF08772.11 gi|452209354|ref|YP_007489468.1| - 5.9 7.1 8.8 2.8 8.2 0.1 2.8 2 1 1 3 3 3 0 Nin one binding (NOB1) Zn-ribbon like ATPgrasp_TupA PF14305.6 gi|452209355|ref|YP_007489469.1| - 1.6e-80 270.4 0.5 1.9e-80 270.2 0.5 1.0 1 0 0 1 1 1 1 TupA-like ATPgrasp Metallophos_2 PF12850.7 gi|452209356|ref|YP_007489470.1| - 1.9e-05 24.9 0.0 2.5e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain ssDNA_DBD PF18333.1 gi|452209356|ref|YP_007489470.1| - 0.2 11.8 0.0 0.33 11.1 0.0 1.3 1 0 0 1 1 1 0 Non-canonical single-stranded DNA-binding domain DHHA1 PF02272.19 gi|452209357|ref|YP_007489471.1| - 5.5e-06 26.8 0.0 8.6e-06 26.2 0.0 1.4 1 0 0 1 1 1 1 DHHA1 domain DUF1699 PF08004.11 gi|452209358|ref|YP_007489472.1| - 9.5e-31 106.2 0.8 1e-30 106.0 0.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) Img2 PF05046.14 gi|452209358|ref|YP_007489472.1| - 0.022 15.0 0.1 0.027 14.8 0.1 1.2 1 0 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) ChaB PF06150.12 gi|452209359|ref|YP_007489473.1| - 1.7e-27 95.7 2.2 2.1e-27 95.5 2.2 1.1 1 0 0 1 1 1 1 ChaB Chorismate_synt PF01264.21 gi|452209359|ref|YP_007489473.1| - 0.18 10.5 0.0 0.18 10.5 0.0 1.0 1 0 0 1 1 1 0 Chorismate synthase DUF1699 PF08004.11 gi|452209360|ref|YP_007489474.1| - 1.2e-62 209.3 2.6 1.3e-62 209.2 2.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) Img2 PF05046.14 gi|452209360|ref|YP_007489474.1| - 0.0088 16.3 0.1 0.014 15.7 0.1 1.3 1 0 0 1 1 1 1 Mitochondrial large subunit ribosomal protein (Img2) PAM2 PF07145.15 gi|452209360|ref|YP_007489474.1| - 0.095 12.4 0.3 12 5.8 0.1 2.4 2 0 0 2 2 2 0 Ataxin-2 C-terminal region SlyX PF04102.12 gi|452209362|ref|YP_007489476.1| - 3.9e-08 33.8 47.0 0.0035 17.9 0.7 7.1 2 2 6 8 8 8 5 SlyX ERM PF00769.19 gi|452209362|ref|YP_007489476.1| - 6.5e-06 26.1 73.1 0.0087 15.9 22.2 4.1 1 1 3 4 4 4 3 Ezrin/radixin/moesin family ATG16 PF08614.11 gi|452209362|ref|YP_007489476.1| - 6.6e-06 26.5 65.2 0.087 13.0 11.5 4.7 1 1 4 5 5 5 4 Autophagy protein 16 (ATG16) Fib_alpha PF08702.10 gi|452209362|ref|YP_007489476.1| - 1.6e-05 25.1 46.5 0.0098 16.1 7.4 5.9 1 1 5 6 6 6 5 Fibrinogen alpha/beta chain family PKcGMP_CC PF16808.5 gi|452209362|ref|YP_007489476.1| - 2.7e-05 23.9 85.5 0.011 15.6 0.5 11.0 7 3 6 13 13 13 5 Coiled-coil N-terminus of cGMP-dependent protein kinase Fez1 PF06818.15 gi|452209362|ref|YP_007489476.1| - 5e-05 23.8 64.6 0.18 12.2 19.2 4.6 1 1 3 4 4 4 2 Fez1 DUF16 PF01519.16 gi|452209362|ref|YP_007489476.1| - 8.6e-05 23.0 56.0 0.023 15.2 4.7 6.4 1 1 4 5 5 5 1 Protein of unknown function DUF16 HOOK PF05622.12 gi|452209362|ref|YP_007489476.1| - 0.00028 19.2 68.1 0.0064 14.7 27.1 3.8 1 1 4 5 5 5 4 HOOK protein AAA_13 PF13166.6 gi|452209362|ref|YP_007489476.1| - 0.00034 19.4 25.3 0.00034 19.4 25.3 3.1 1 1 2 3 3 3 2 AAA domain Cast PF10174.9 gi|452209362|ref|YP_007489476.1| - 0.00063 18.1 67.4 0.0032 15.8 41.1 2.3 1 1 1 2 2 2 2 RIM-binding protein of the cytomatrix active zone Tropomyosin_1 PF12718.7 gi|452209362|ref|YP_007489476.1| - 0.0021 18.2 79.9 0.1 12.7 15.1 5.6 1 1 4 5 5 5 3 Tropomyosin like MscS_porin PF12795.7 gi|452209362|ref|YP_007489476.1| - 0.0042 16.7 43.0 0.011 15.3 5.0 4.6 1 1 4 5 5 5 3 Mechanosensitive ion channel porin domain TPR_7 PF13176.6 gi|452209362|ref|YP_007489476.1| - 0.0051 16.7 0.4 0.22 11.6 0.0 3.4 3 0 0 3 3 3 1 Tetratricopeptide repeat Spc7 PF08317.11 gi|452209362|ref|YP_007489476.1| - 0.046 12.6 73.9 0.071 12.0 20.4 4.7 1 1 5 6 6 6 0 Spc7 kinetochore protein HIP1_clath_bdg PF16515.5 gi|452209362|ref|YP_007489476.1| - 0.38 11.4 60.2 0.14 12.8 6.6 5.7 1 1 3 5 5 5 0 Clathrin-binding domain of Huntingtin-interacting protein 1 BLOC1_2 PF10046.9 gi|452209362|ref|YP_007489476.1| - 0.49 10.7 50.1 1.4 9.3 1.6 6.1 1 1 5 6 6 6 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF641 PF04859.12 gi|452209362|ref|YP_007489476.1| - 0.54 10.6 59.6 3.1 8.1 2.5 7.8 1 1 7 8 8 8 0 Plant protein of unknown function (DUF641) DUF4201 PF13870.6 gi|452209362|ref|YP_007489476.1| - 1.1 8.9 65.2 0.026 14.3 8.7 5.3 1 1 4 5 5 5 0 Domain of unknown function (DUF4201) Phage_tail_NK PF16532.5 gi|452209362|ref|YP_007489476.1| - 1.8 8.2 3.4 39 3.8 0.0 3.3 4 0 0 4 4 4 0 Sf6-type phage tail needle knob or tip of some Caudovirales CENP-F_leu_zip PF10473.9 gi|452209362|ref|YP_007489476.1| - 2.1 8.4 83.9 1.6 8.7 21.0 5.1 1 1 4 5 5 5 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 HemX PF04375.14 gi|452209362|ref|YP_007489476.1| - 2.7 7.2 33.9 2.6 7.2 2.7 4.4 1 1 2 3 3 3 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF4200 PF13863.6 gi|452209362|ref|YP_007489476.1| - 3.2 8.2 75.9 2.4 8.6 17.6 5.3 1 1 5 6 6 6 0 Domain of unknown function (DUF4200) Nsp1_C PF05064.13 gi|452209362|ref|YP_007489476.1| - 3.5 7.5 44.9 0.25 11.1 7.1 5.2 1 1 5 6 6 6 0 Nsp1-like C-terminal region Tropomyosin PF00261.20 gi|452209362|ref|YP_007489476.1| - 5.8 6.2 80.4 3.9 6.8 19.6 3.4 1 1 2 3 3 3 0 Tropomyosin Mod_r PF07200.13 gi|452209362|ref|YP_007489476.1| - 7 6.8 55.6 20 5.3 13.5 5.3 1 1 3 5 5 5 0 Modifier of rudimentary (Mod(r)) protein HMMR_N PF15905.5 gi|452209362|ref|YP_007489476.1| - 7.6 5.9 77.1 1.6 8.1 19.2 4.0 1 1 3 4 4 4 0 Hyaluronan mediated motility receptor N-terminal DUF1699 PF08004.11 gi|452209363|ref|YP_007489477.1| - 2.7e-45 153.2 0.0 3e-45 153.1 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) Sua5_yciO_yrdC PF01300.18 gi|452209364|ref|YP_007489478.1| - 7.3e-44 149.4 0.0 1.3e-43 148.6 0.0 1.4 1 0 0 1 1 1 1 Telomere recombination zf-HYPF PF07503.12 gi|452209364|ref|YP_007489478.1| - 2.9e-32 110.1 17.8 1.1e-16 60.3 5.7 2.5 2 0 0 2 2 2 2 HypF finger HypF_C PF17788.1 gi|452209364|ref|YP_007489478.1| - 3.1e-24 85.6 0.5 6e-24 84.7 0.5 1.5 1 0 0 1 1 1 1 HypF Kae1-like domain Acylphosphatase PF00708.18 gi|452209364|ref|YP_007489478.1| - 2.3e-21 76.0 0.0 7.9e-21 74.3 0.0 1.9 2 0 0 2 2 2 1 Acylphosphatase Peptidase_M22 PF00814.25 gi|452209364|ref|YP_007489478.1| - 0.014 15.2 0.0 0.023 14.4 0.0 1.3 1 0 0 1 1 1 0 Glycoprotease family DZR PF12773.7 gi|452209364|ref|YP_007489478.1| - 0.021 14.8 7.6 0.35 10.9 0.4 2.4 2 0 0 2 2 2 0 Double zinc ribbon Cys_rich_KTR PF14205.6 gi|452209364|ref|YP_007489478.1| - 1.5 8.7 5.3 7.2 6.5 1.5 2.5 2 0 0 2 2 2 0 Cysteine-rich KTR LIM PF00412.22 gi|452209364|ref|YP_007489478.1| - 1.8 8.8 5.2 24 5.2 1.4 2.5 1 1 1 2 2 2 0 LIM domain Zn-ribbon_8 PF09723.10 gi|452209364|ref|YP_007489478.1| - 4.6 7.4 14.6 74 3.6 0.1 3.4 2 1 0 2 2 2 0 Zinc ribbon domain NMD3 PF04981.13 gi|452209364|ref|YP_007489478.1| - 4.7 6.6 7.3 3.2 7.2 0.4 2.2 1 1 1 2 2 2 0 NMD3 family FYDLN_acid PF09538.10 gi|452209364|ref|YP_007489478.1| - 6.3 7.5 5.5 0.51 11.0 0.5 1.7 2 0 0 2 2 2 0 Protein of unknown function (FYDLN_acid) ATP-synt_D PF01813.17 gi|452209365|ref|YP_007489479.1| - 7.9e-57 192.3 7.5 8.9e-57 192.1 7.5 1.0 1 0 0 1 1 1 1 ATP synthase subunit D ATP-synt_ab PF00006.25 gi|452209366|ref|YP_007489480.1| - 2.9e-65 219.9 0.0 3.8e-65 219.5 0.0 1.1 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 gi|452209366|ref|YP_007489480.1| - 1.3e-13 51.2 2.1 1.3e-13 51.2 2.1 1.8 2 0 0 2 2 2 1 ATP synthase alpha/beta family, beta-barrel domain HAS-barrel PF09378.10 gi|452209366|ref|YP_007489480.1| - 0.0017 18.5 1.0 0.0034 17.5 0.5 1.8 2 0 0 2 2 2 1 HAS barrel domain DUF561 PF04481.12 gi|452209366|ref|YP_007489480.1| - 0.017 14.3 0.0 0.028 13.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF561) ATP-synt_ab PF00006.25 gi|452209367|ref|YP_007489481.1| - 2.8e-95 318.0 0.0 4.1e-95 317.5 0.0 1.3 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_Xtn PF16886.5 gi|452209367|ref|YP_007489481.1| - 6.9e-42 142.1 0.1 1.3e-41 141.2 0.1 1.5 1 0 0 1 1 1 1 ATPsynthase alpha/beta subunit N-term extension ATP-synt_ab_N PF02874.23 gi|452209367|ref|YP_007489481.1| - 1.4e-07 31.9 0.6 7.7e-07 29.5 0.5 2.3 2 0 0 2 2 2 1 ATP synthase alpha/beta family, beta-barrel domain RnfC_N PF13375.6 gi|452209367|ref|YP_007489481.1| - 0.0047 16.9 0.2 0.011 15.7 0.2 1.5 1 0 0 1 1 1 1 RnfC Barrel sandwich hybrid domain AAA_22 PF13401.6 gi|452209367|ref|YP_007489481.1| - 0.088 13.1 0.0 0.21 11.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain ATP-synt_F PF01990.17 gi|452209368|ref|YP_007489482.1| - 7.2e-13 48.7 0.0 8e-13 48.5 0.0 1.0 1 0 0 1 1 1 1 ATP synthase (F/14-kDa) subunit Asparaginase_C PF17763.1 gi|452209368|ref|YP_007489482.1| - 0.15 12.3 0.0 0.21 11.8 0.0 1.4 1 1 0 1 1 1 0 Glutaminase/Asparaginase C-terminal domain vATP-synt_AC39 PF01992.16 gi|452209369|ref|YP_007489483.1| - 1.1e-66 225.7 7.6 1.4e-66 225.3 7.6 1.0 1 0 0 1 1 1 1 ATP synthase (C/AC39) subunit vATP-synt_E PF01991.18 gi|452209369|ref|YP_007489483.1| - 0.00039 19.9 0.0 0.0009 18.7 0.0 1.6 1 0 0 1 1 1 1 ATP synthase (E/31 kDa) subunit ATP-synt_C PF00137.21 gi|452209370|ref|YP_007489484.1| - 2.4e-14 53.4 11.4 3.2e-14 53.0 11.4 1.2 1 0 0 1 1 1 1 ATP synthase subunit C CinA PF02464.17 gi|452209370|ref|YP_007489484.1| - 0.017 14.7 0.6 0.018 14.6 0.6 1.1 1 0 0 1 1 1 0 Competence-damaged protein V_ATPase_I PF01496.19 gi|452209371|ref|YP_007489485.1| - 1.2e-27 96.3 7.4 1.8e-17 62.6 0.3 3.6 2 1 0 3 3 3 2 V-type ATPase 116kDa subunit family Vps51 PF08700.11 gi|452209371|ref|YP_007489485.1| - 0.029 14.5 1.5 1.6 8.9 0.1 2.7 2 1 0 2 2 2 0 Vps51/Vps67 MPS2 PF17060.5 gi|452209371|ref|YP_007489485.1| - 0.031 13.5 1.4 0.065 12.5 0.5 1.9 2 0 0 2 2 2 0 Monopolar spindle protein 2 MerR-DNA-bind PF09278.11 gi|452209371|ref|YP_007489485.1| - 0.035 14.7 0.7 19 5.9 0.1 3.5 3 0 0 3 3 3 0 MerR, DNA binding TOM13 PF08219.11 gi|452209371|ref|YP_007489485.1| - 0.035 14.1 0.0 0.13 12.3 0.0 1.9 1 0 0 1 1 1 0 Outer membrane protein TOM13 DUF5082 PF16888.5 gi|452209371|ref|YP_007489485.1| - 0.043 14.1 2.1 0.13 12.6 0.6 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF5082) DivIC PF04977.15 gi|452209371|ref|YP_007489485.1| - 0.14 11.9 4.6 5.2 6.9 1.7 2.7 2 0 0 2 2 2 0 Septum formation initiator SKA1 PF07160.12 gi|452209371|ref|YP_007489485.1| - 0.17 11.7 0.8 0.29 10.9 0.2 1.7 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 1 DUF3450 PF11932.8 gi|452209371|ref|YP_007489485.1| - 0.23 10.7 1.5 0.49 9.7 0.4 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) DUF1351 PF07083.11 gi|452209371|ref|YP_007489485.1| - 0.25 11.1 5.8 0.38 10.5 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1351) Atg14 PF10186.9 gi|452209371|ref|YP_007489485.1| - 0.36 9.9 1.7 0.28 10.2 0.2 1.5 2 0 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 CENP-F_leu_zip PF10473.9 gi|452209371|ref|YP_007489485.1| - 0.36 10.8 4.1 9.4 6.3 0.5 2.4 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 BLOC1_2 PF10046.9 gi|452209371|ref|YP_007489485.1| - 0.39 11.0 4.2 10 6.5 0.9 2.6 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF4200 PF13863.6 gi|452209371|ref|YP_007489485.1| - 1.1 9.6 3.9 2 8.8 0.4 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4200) UPF0242 PF06785.11 gi|452209371|ref|YP_007489485.1| - 1.2 9.2 4.9 0.57 10.3 0.3 2.5 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus APG6_N PF17675.1 gi|452209371|ref|YP_007489485.1| - 1.3 9.6 7.9 2.1 8.9 2.4 2.3 2 0 0 2 2 2 0 Apg6 coiled-coil region ATG16 PF08614.11 gi|452209371|ref|YP_007489485.1| - 1.9 8.7 6.0 2 8.6 3.1 2.0 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) TMF_DNA_bd PF12329.8 gi|452209371|ref|YP_007489485.1| - 2.3 8.3 7.7 2.4 8.2 3.5 2.7 3 0 0 3 3 3 0 TATA element modulatory factor 1 DNA binding DUF4164 PF13747.6 gi|452209371|ref|YP_007489485.1| - 3.7 7.9 5.8 1.9 8.8 1.6 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4164) 4HB_MCP_1 PF12729.7 gi|452209371|ref|YP_007489485.1| - 4.4 6.8 6.7 19 4.7 0.1 3.4 3 0 0 3 3 3 0 Four helix bundle sensory module for signal transduction ZapB PF06005.12 gi|452209371|ref|YP_007489485.1| - 5.6 7.5 7.8 10 6.6 1.1 2.3 2 0 0 2 2 2 0 Cell division protein ZapB ABC_tran_CTD PF16326.5 gi|452209371|ref|YP_007489485.1| - 7.2 6.9 8.2 16 5.9 0.7 2.8 2 1 0 2 2 2 0 ABC transporter C-terminal domain V-ATPase_G_2 PF16999.5 gi|452209372|ref|YP_007489486.1| - 2e-07 31.4 16.3 2.3e-07 31.1 16.3 1.0 1 0 0 1 1 1 1 Vacuolar (H+)-ATPase G subunit V-ATPase_G PF03179.15 gi|452209372|ref|YP_007489486.1| - 0.00031 21.2 14.5 0.00041 20.8 14.5 1.3 1 0 0 1 1 1 1 Vacuolar (H+)-ATPase G subunit ATP-synt_B PF00430.18 gi|452209372|ref|YP_007489486.1| - 0.0014 18.7 20.4 0.0074 16.4 12.4 2.0 1 1 1 2 2 2 2 ATP synthase B/B' CF(0) FAM25 PF15825.5 gi|452209372|ref|YP_007489486.1| - 2.9 8.3 9.0 1.8 9.0 1.0 2.8 1 1 2 3 3 3 0 FAM25 family DUF883 PF05957.13 gi|452209372|ref|YP_007489486.1| - 3.8 8.2 8.0 4 8.1 6.0 1.8 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) DivIVA PF05103.13 gi|452209372|ref|YP_007489486.1| - 5.2 7.2 14.8 0.98 9.5 7.4 2.1 1 1 1 2 2 2 0 DivIVA protein Radical_SAM PF04055.21 gi|452209373|ref|YP_007489487.1| - 3.8e-15 56.7 0.0 5.7e-15 56.1 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily SPASM PF13186.6 gi|452209373|ref|YP_007489487.1| - 1.6e-09 38.1 0.1 4.5e-09 36.7 0.1 1.8 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain polyprenyl_synt PF00348.17 gi|452209374|ref|YP_007489488.1| - 3.8e-48 163.8 0.0 4.7e-48 163.5 0.0 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase CcmE PF03100.15 gi|452209375|ref|YP_007489489.1| - 5.7e-20 71.6 0.0 6.1e-20 71.5 0.0 1.0 1 0 0 1 1 1 1 CcmE ACT PF01842.25 gi|452209376|ref|YP_007489490.1| - 3.6e-08 33.0 0.0 4.7e-07 29.5 0.0 2.5 2 0 0 2 2 2 1 ACT domain Lactamase_B PF00753.27 gi|452209376|ref|YP_007489490.1| - 2.2e-06 27.8 0.0 5e-06 26.7 0.0 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Thr_dehydrat_C PF00585.18 gi|452209376|ref|YP_007489490.1| - 0.0001 22.0 0.0 0.34 10.7 0.0 2.6 1 1 1 2 2 2 2 C-terminal regulatory domain of Threonine dehydratase ACT_4 PF13291.6 gi|452209376|ref|YP_007489490.1| - 0.013 16.1 0.0 8.7 7.0 0.0 2.5 2 0 0 2 2 2 0 ACT domain TetR_C_5 PF08360.11 gi|452209376|ref|YP_007489490.1| - 0.021 15.0 0.1 0.046 13.9 0.1 1.5 1 0 0 1 1 1 0 QacR-like protein, C-terminal region Lactamase_B_2 PF12706.7 gi|452209376|ref|YP_007489490.1| - 0.045 13.3 0.0 0.075 12.5 0.0 1.4 1 0 0 1 1 1 0 Beta-lactamase superfamily domain DUF123 PF01986.16 gi|452209377|ref|YP_007489491.1| - 3.8e-29 101.1 0.0 4.7e-29 100.7 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF123 ADP_ribosyl_GH PF03747.14 gi|452209378|ref|YP_007489492.1| - 1.3e-65 222.0 0.1 1.6e-65 221.8 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase Inhibitor_I42 PF09394.10 gi|452209379|ref|YP_007489493.1| - 9.5e-12 45.2 0.0 1.7e-11 44.3 0.0 1.4 1 0 0 1 1 1 1 Chagasin family peptidase inhibitor I42 Inhibitor_I71 PF12628.7 gi|452209379|ref|YP_007489493.1| - 0.19 11.6 2.1 1.7 8.5 0.5 2.6 1 1 2 3 3 3 0 Falstatin, cysteine peptidase inhibitor Hexapep_2 PF14602.6 gi|452209379|ref|YP_007489493.1| - 0.28 11.0 2.0 0.51 10.1 0.2 2.2 2 0 0 2 2 2 0 Hexapeptide repeat of succinyl-transferase AAA PF00004.29 gi|452209382|ref|YP_007489496.1| - 4.4e-43 146.9 0.0 9.8e-43 145.7 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|452209382|ref|YP_007489496.1| - 1.2e-06 28.2 0.0 4.3e-06 26.4 0.0 1.9 2 0 0 2 2 2 1 AAA+ lid domain AAA_16 PF13191.6 gi|452209382|ref|YP_007489496.1| - 3.8e-06 27.4 0.1 0.00045 20.6 0.1 2.5 1 1 1 2 2 2 1 AAA ATPase domain AAA_5 PF07728.14 gi|452209382|ref|YP_007489496.1| - 5.4e-05 23.2 0.0 0.00018 21.5 0.0 1.8 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 gi|452209382|ref|YP_007489496.1| - 6.8e-05 22.7 0.0 0.00023 20.9 0.0 1.9 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 gi|452209382|ref|YP_007489496.1| - 0.00017 21.8 0.1 0.01 16.1 0.1 2.5 1 1 0 1 1 1 1 AAA domain AAA_2 PF07724.14 gi|452209382|ref|YP_007489496.1| - 0.00019 21.6 0.0 0.00042 20.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_14 PF13173.6 gi|452209382|ref|YP_007489496.1| - 0.004 17.2 0.0 0.0088 16.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|452209382|ref|YP_007489496.1| - 0.0054 16.9 0.0 0.0093 16.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain Torsin PF06309.11 gi|452209382|ref|YP_007489496.1| - 0.0061 16.7 0.0 0.014 15.5 0.0 1.5 1 0 0 1 1 1 1 Torsin ATPase PF06745.13 gi|452209382|ref|YP_007489496.1| - 0.0063 15.9 0.0 0.034 13.5 0.0 2.1 1 1 1 2 2 2 1 KaiC CPT PF07931.12 gi|452209382|ref|YP_007489496.1| - 0.007 16.2 0.0 0.013 15.4 0.0 1.4 1 0 0 1 1 1 1 Chloramphenicol phosphotransferase-like protein RNA_helicase PF00910.22 gi|452209382|ref|YP_007489496.1| - 0.0072 16.7 0.0 0.012 16.0 0.0 1.4 1 0 0 1 1 1 1 RNA helicase AAA_3 PF07726.11 gi|452209382|ref|YP_007489496.1| - 0.0072 16.2 0.0 0.017 15.0 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 gi|452209382|ref|YP_007489496.1| - 0.009 15.7 0.1 0.045 13.4 0.0 2.2 3 0 0 3 3 3 1 Sigma-54 interaction domain TIP49 PF06068.13 gi|452209382|ref|YP_007489496.1| - 0.0094 15.2 0.0 0.018 14.3 0.0 1.4 1 0 0 1 1 1 1 TIP49 P-loop domain Sigma54_activ_2 PF14532.6 gi|452209382|ref|YP_007489496.1| - 0.01 15.9 0.0 0.075 13.1 0.0 2.2 2 0 0 2 2 2 0 Sigma-54 interaction domain IstB_IS21 PF01695.17 gi|452209382|ref|YP_007489496.1| - 0.013 15.2 0.0 0.024 14.4 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein DUF2075 PF09848.9 gi|452209382|ref|YP_007489496.1| - 0.019 14.2 0.0 0.029 13.6 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_17 PF13207.6 gi|452209382|ref|YP_007489496.1| - 0.032 14.6 0.2 0.5 10.8 0.0 2.4 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 gi|452209382|ref|YP_007489496.1| - 0.046 14.3 0.0 0.12 12.9 0.0 1.7 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|452209382|ref|YP_007489496.1| - 0.048 13.0 0.1 0.11 11.9 0.1 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Viral_helicase1 PF01443.18 gi|452209382|ref|YP_007489496.1| - 0.05 13.3 0.0 0.084 12.6 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_28 PF13521.6 gi|452209382|ref|YP_007489496.1| - 0.062 13.5 0.0 0.12 12.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain DUF815 PF05673.13 gi|452209382|ref|YP_007489496.1| - 0.071 12.3 0.0 0.14 11.3 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF815) YabA PF06156.13 gi|452209382|ref|YP_007489496.1| - 0.082 13.6 0.3 0.18 12.5 0.3 1.5 1 0 0 1 1 1 0 Initiation control protein YabA NACHT PF05729.12 gi|452209382|ref|YP_007489496.1| - 0.084 12.8 0.3 0.24 11.3 0.2 1.8 1 1 1 2 2 2 0 NACHT domain NB-ARC PF00931.22 gi|452209382|ref|YP_007489496.1| - 0.098 11.8 0.0 0.48 9.6 0.0 2.0 2 0 0 2 2 2 0 NB-ARC domain Zeta_toxin PF06414.12 gi|452209382|ref|YP_007489496.1| - 0.13 11.5 0.0 0.27 10.5 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin TsaE PF02367.17 gi|452209382|ref|YP_007489496.1| - 0.17 11.9 0.0 0.32 11.0 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_7 PF12775.7 gi|452209382|ref|YP_007489496.1| - 0.19 11.2 0.0 0.4 10.2 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region ADK PF00406.22 gi|452209382|ref|YP_007489496.1| - 0.21 11.7 0.5 2.7 8.1 0.0 2.2 2 0 0 2 2 2 0 Adenylate kinase Parvo_NS1 PF01057.17 gi|452209382|ref|YP_007489496.1| - 0.22 10.6 0.0 0.37 9.8 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 DUF131 PF01998.17 gi|452209384|ref|YP_007489498.1| - 3.1e-12 45.9 6.3 5.7e-12 45.1 6.3 1.5 1 1 0 1 1 1 1 Protein of unknown function DUF131 DUF131 PF01998.17 gi|452209385|ref|YP_007489499.1| - 1.5e-21 75.7 6.4 1.5e-21 75.7 6.4 2.4 1 1 1 2 2 2 1 Protein of unknown function DUF131 DUF3784 PF12650.7 gi|452209385|ref|YP_007489499.1| - 0.0015 18.7 0.9 0.57 10.4 0.0 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF3784) TssO PF17561.2 gi|452209385|ref|YP_007489499.1| - 0.0045 17.1 0.3 0.22 11.6 0.0 2.0 2 0 0 2 2 2 1 Type VI secretion system, TssO Tetraspanin PF00335.20 gi|452209385|ref|YP_007489499.1| - 0.017 14.8 0.0 0.028 14.1 0.0 1.4 1 1 0 1 1 1 0 Tetraspanin family DUF4834 PF16118.5 gi|452209385|ref|YP_007489499.1| - 0.036 15.0 3.8 0.038 15.0 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) Baculo_11_kDa PF06143.11 gi|452209385|ref|YP_007489499.1| - 0.11 12.0 1.3 0.41 10.3 0.0 2.0 2 0 0 2 2 2 0 Baculovirus 11 kDa family DUF202 PF02656.15 gi|452209385|ref|YP_007489499.1| - 0.2 12.1 2.4 11 6.5 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF202) Saf_2TM PF18303.1 gi|452209385|ref|YP_007489499.1| - 0.37 10.4 4.2 1.1 8.8 0.1 2.2 2 0 0 2 2 2 0 SAVED-fused 2TM effector domain SdpI PF13630.6 gi|452209385|ref|YP_007489499.1| - 0.85 9.8 6.3 5.2 7.3 0.0 2.2 2 0 0 2 2 2 0 SdpI/YhfL protein family Adenylsucc_synt PF00709.21 gi|452209386|ref|YP_007489500.1| - 2.2e-163 544.1 0.0 2.5e-163 543.9 0.0 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase Ribosomal_S19e PF01090.19 gi|452209387|ref|YP_007489501.1| - 4e-54 182.0 0.0 4.5e-54 181.9 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e RuvB_C PF05491.13 gi|452209387|ref|YP_007489501.1| - 0.051 13.5 0.0 17 5.4 0.0 2.7 3 0 0 3 3 3 0 RuvB C-terminal winged helix domain dsDNA_bind PF01984.20 gi|452209388|ref|YP_007489502.1| - 8.4e-29 100.1 18.4 9.3e-29 99.9 18.4 1.0 1 0 0 1 1 1 1 Double-stranded DNA-binding domain cwf18 PF08315.12 gi|452209388|ref|YP_007489502.1| - 0.02 15.6 8.6 0.023 15.4 8.6 1.0 1 0 0 1 1 1 0 cwf18 pre-mRNA splicing factor DUF4355 PF14265.6 gi|452209388|ref|YP_007489502.1| - 0.34 11.2 14.2 0.055 13.7 10.0 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4355) Asn_synthase PF00733.21 gi|452209389|ref|YP_007489503.1| - 0.0016 18.2 0.0 0.0028 17.4 0.0 1.4 2 0 0 2 2 2 1 Asparagine synthase QueC PF06508.13 gi|452209389|ref|YP_007489503.1| - 0.017 14.6 0.0 0.025 14.1 0.0 1.2 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC Diphthami_syn_2 PF01902.17 gi|452209389|ref|YP_007489503.1| - 0.045 13.3 0.0 0.16 11.4 0.0 1.8 2 0 0 2 2 2 0 Diphthamide synthase tRNA_Me_trans PF03054.16 gi|452209389|ref|YP_007489503.1| - 0.06 12.1 0.0 0.11 11.3 0.0 1.6 2 0 0 2 2 2 0 tRNA methyl transferase Ribosomal_L39 PF00832.20 gi|452209390|ref|YP_007489504.1| - 5.3e-20 70.8 7.9 5.8e-20 70.6 7.9 1.0 1 0 0 1 1 1 1 Ribosomal L39 protein Ribosomal_L31e PF01198.19 gi|452209391|ref|YP_007489505.1| - 1.9e-12 47.3 0.1 2.3e-12 47.0 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L31e eIF-6 PF01912.18 gi|452209392|ref|YP_007489506.1| - 1e-66 224.1 1.0 1.2e-66 223.9 1.0 1.0 1 0 0 1 1 1 1 eIF-6 family Ribosomal_L18A PF01775.17 gi|452209393|ref|YP_007489507.1| - 3.1e-12 46.6 0.4 3.5e-12 46.5 0.4 1.1 1 0 0 1 1 1 1 Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A DUF5035 PF16438.5 gi|452209393|ref|YP_007489507.1| - 0.041 13.7 0.4 0.041 13.7 0.4 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5035) Prefoldin PF02996.17 gi|452209394|ref|YP_007489508.1| - 2.6e-30 104.8 1.5 3.5e-30 104.4 1.5 1.2 1 0 0 1 1 1 1 Prefoldin subunit Prefoldin_2 PF01920.20 gi|452209394|ref|YP_007489508.1| - 3.4e-06 27.0 4.8 0.00089 19.2 0.5 2.1 2 0 0 2 2 2 2 Prefoldin subunit CENP-F_leu_zip PF10473.9 gi|452209394|ref|YP_007489508.1| - 0.00044 20.3 5.2 0.016 15.2 0.4 2.1 2 0 0 2 2 2 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 IES5 PF17335.2 gi|452209394|ref|YP_007489508.1| - 0.0011 19.3 0.2 0.12 12.6 0.0 2.1 2 0 0 2 2 2 1 Ino80 complex subunit 5 RasGAP_C PF03836.15 gi|452209394|ref|YP_007489508.1| - 0.0013 18.9 0.2 0.84 9.8 0.0 2.1 2 0 0 2 2 2 1 RasGAP C-terminus XRCC4 PF06632.12 gi|452209394|ref|YP_007489508.1| - 0.0017 17.3 1.0 0.15 10.9 0.0 2.0 2 0 0 2 2 2 1 DNA double-strand break repair and V(D)J recombination protein XRCC4 DUF3450 PF11932.8 gi|452209394|ref|YP_007489508.1| - 0.0036 16.6 8.9 0.087 12.1 0.4 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF3450) Peptidase_M13_N PF05649.13 gi|452209394|ref|YP_007489508.1| - 0.004 16.9 0.1 0.0046 16.7 0.1 1.2 1 0 0 1 1 1 1 Peptidase family M13 DUF3138 PF11336.8 gi|452209394|ref|YP_007489508.1| - 0.0041 15.8 2.0 0.0041 15.8 2.0 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF3138) FapA PF03961.13 gi|452209394|ref|YP_007489508.1| - 0.0042 15.8 0.8 0.55 8.8 0.1 2.0 2 0 0 2 2 2 1 Flagellar Assembly Protein A DUF1664 PF07889.12 gi|452209394|ref|YP_007489508.1| - 0.0081 16.2 2.8 1.5 8.8 0.1 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF1664) DUF948 PF06103.11 gi|452209394|ref|YP_007489508.1| - 0.0099 16.1 2.7 0.094 13.0 0.2 2.2 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF948) JIP_LZII PF16471.5 gi|452209394|ref|YP_007489508.1| - 0.01 16.0 6.0 0.31 11.2 0.4 2.2 2 0 0 2 2 2 1 JNK-interacting protein leucine zipper II SIMPL PF04402.14 gi|452209394|ref|YP_007489508.1| - 0.011 16.2 0.1 0.011 16.2 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF541) TACC_C PF05010.14 gi|452209394|ref|YP_007489508.1| - 0.012 15.4 1.5 0.016 15.0 1.5 1.2 1 0 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal Spc7 PF08317.11 gi|452209394|ref|YP_007489508.1| - 0.013 14.4 9.5 0.33 9.8 0.6 2.0 2 0 0 2 2 2 0 Spc7 kinetochore protein SIKE PF05769.11 gi|452209394|ref|YP_007489508.1| - 0.014 15.3 3.2 0.067 13.1 0.8 2.0 2 0 0 2 2 2 0 SIKE family DegS PF05384.11 gi|452209394|ref|YP_007489508.1| - 0.016 14.7 1.9 0.58 9.6 0.3 2.1 2 0 0 2 2 2 0 Sensor protein DegS CENP-Q PF13094.6 gi|452209394|ref|YP_007489508.1| - 0.017 15.4 3.8 0.21 11.8 0.1 2.0 2 0 0 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit Tropomyosin_1 PF12718.7 gi|452209394|ref|YP_007489508.1| - 0.018 15.2 3.9 0.9 9.7 0.1 2.2 2 0 0 2 2 2 0 Tropomyosin like Rx_N PF18052.1 gi|452209394|ref|YP_007489508.1| - 0.019 15.2 2.0 0.53 10.6 0.2 2.2 2 0 0 2 2 2 0 Rx N-terminal domain Baculo_PEP_C PF04513.12 gi|452209394|ref|YP_007489508.1| - 0.023 14.7 1.6 3.1 7.8 0.1 2.1 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus PI3K_P85_iSH2 PF16454.5 gi|452209394|ref|YP_007489508.1| - 0.026 14.1 3.7 2.4 7.7 0.3 2.2 2 0 0 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain AIP3 PF03915.13 gi|452209394|ref|YP_007489508.1| - 0.027 13.6 1.0 0.033 13.3 1.0 1.0 1 0 0 1 1 1 0 Actin interacting protein 3 DUF4795 PF16043.5 gi|452209394|ref|YP_007489508.1| - 0.029 14.0 2.6 1.8 8.1 0.4 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4795) DUF148 PF02520.17 gi|452209394|ref|YP_007489508.1| - 0.029 14.5 6.7 0.28 11.3 0.9 2.2 2 0 0 2 2 2 0 Domain of unknown function DUF148 UPF0242 PF06785.11 gi|452209394|ref|YP_007489508.1| - 0.032 14.3 2.8 1.9 8.6 0.1 2.1 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Sec3_C_2 PF15278.6 gi|452209394|ref|YP_007489508.1| - 0.033 14.5 0.6 10 6.5 0.1 2.2 2 0 0 2 2 2 0 Sec3 exocyst complex subunit CdvA PF18822.1 gi|452209394|ref|YP_007489508.1| - 0.042 13.7 6.6 0.67 9.8 1.5 2.2 2 0 0 2 2 2 0 CdvA-like coiled-coil domain DHR10 PF18595.1 gi|452209394|ref|YP_007489508.1| - 0.045 13.8 8.8 0.25 11.4 0.6 2.3 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain KxDL PF10241.9 gi|452209394|ref|YP_007489508.1| - 0.047 14.0 4.4 0.18 12.1 0.4 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein OmpH PF03938.14 gi|452209394|ref|YP_007489508.1| - 0.054 13.8 8.0 0.24 11.7 0.4 2.2 2 0 0 2 2 2 0 Outer membrane protein (OmpH-like) Nup54 PF13874.6 gi|452209394|ref|YP_007489508.1| - 0.059 13.5 3.4 2.4 8.3 0.1 2.3 2 0 0 2 2 2 0 Nucleoporin complex subunit 54 HAUS-augmin3 PF14932.6 gi|452209394|ref|YP_007489508.1| - 0.064 12.8 6.8 0.33 10.5 0.4 2.1 2 0 0 2 2 2 0 HAUS augmin-like complex subunit 3 WXG100 PF06013.12 gi|452209394|ref|YP_007489508.1| - 0.065 13.5 7.4 0.67 10.2 0.2 2.4 2 1 0 2 2 2 0 Proteins of 100 residues with WXG YabA PF06156.13 gi|452209394|ref|YP_007489508.1| - 0.073 13.7 2.5 3.6 8.3 0.1 2.2 2 0 0 2 2 2 0 Initiation control protein YabA DUF1043 PF06295.12 gi|452209394|ref|YP_007489508.1| - 0.075 13.0 0.4 0.075 13.0 0.4 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1043) YqjK PF13997.6 gi|452209394|ref|YP_007489508.1| - 0.076 13.3 1.0 0.36 11.1 0.1 2.4 2 2 0 2 2 2 0 YqjK-like protein Effector_1 PF04518.12 gi|452209394|ref|YP_007489508.1| - 0.082 12.0 4.6 1.5 7.8 0.9 2.1 2 0 0 2 2 2 0 Effector from type III secretion system Fib_alpha PF08702.10 gi|452209394|ref|YP_007489508.1| - 0.084 13.1 1.2 6.6 6.9 0.1 2.1 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family DUF812 PF05667.11 gi|452209394|ref|YP_007489508.1| - 0.084 11.7 6.3 0.57 9.0 1.4 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF812) TMPIT PF07851.13 gi|452209394|ref|YP_007489508.1| - 0.086 12.1 3.4 0.19 11.0 2.9 1.6 1 1 1 2 2 2 0 TMPIT-like protein MCU PF04678.13 gi|452209394|ref|YP_007489508.1| - 0.092 12.8 5.3 0.16 12.1 0.4 2.1 1 1 1 2 2 2 0 Mitochondrial calcium uniporter Laminin_I PF06008.14 gi|452209394|ref|YP_007489508.1| - 0.11 12.2 8.0 0.88 9.2 1.2 2.1 2 0 0 2 2 2 0 Laminin Domain I Cep57_MT_bd PF06657.13 gi|452209394|ref|YP_007489508.1| - 0.11 12.9 2.1 1.5 9.3 0.3 2.4 2 0 0 2 2 2 0 Centrosome microtubule-binding domain of Cep57 Seryl_tRNA_N PF02403.22 gi|452209394|ref|YP_007489508.1| - 0.12 12.6 6.9 1.7 8.9 1.2 2.2 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Synaptobrevin PF00957.21 gi|452209394|ref|YP_007489508.1| - 0.13 12.1 2.3 0.78 9.6 0.1 2.2 2 0 0 2 2 2 0 Synaptobrevin DUF5320 PF17253.2 gi|452209394|ref|YP_007489508.1| - 0.14 13.2 2.8 2.9 9.0 0.2 2.4 1 1 1 2 2 2 0 Family of unknown function (DUF5320) NPV_P10 PF05531.12 gi|452209394|ref|YP_007489508.1| - 0.16 12.5 0.8 10 6.7 0.1 2.3 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Med30 PF11315.8 gi|452209394|ref|YP_007489508.1| - 0.17 12.1 3.7 1.1 9.5 0.2 2.1 2 0 0 2 2 2 0 Mediator complex subunit 30 BshC PF10079.9 gi|452209394|ref|YP_007489508.1| - 0.18 10.5 3.0 0.24 10.1 0.2 1.9 2 0 0 2 2 2 0 Bacillithiol biosynthesis BshC Tektin PF03148.14 gi|452209394|ref|YP_007489508.1| - 0.18 10.5 8.7 1.4 7.6 1.5 2.0 2 0 0 2 2 2 0 Tektin family APG17 PF04108.12 gi|452209394|ref|YP_007489508.1| - 0.19 10.8 2.8 6.6 5.7 0.9 2.0 2 0 0 2 2 2 0 Autophagy protein Apg17 DUF4200 PF13863.6 gi|452209394|ref|YP_007489508.1| - 0.19 12.1 9.2 2.3 8.6 1.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4200) USP8_interact PF08941.10 gi|452209394|ref|YP_007489508.1| - 0.2 11.4 3.0 0.68 9.7 0.8 2.0 2 0 0 2 2 2 0 USP8 interacting ADIP PF11559.8 gi|452209394|ref|YP_007489508.1| - 0.21 11.7 7.5 1.3 9.1 1.2 2.1 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding Ribosomal_L5 PF00281.19 gi|452209394|ref|YP_007489508.1| - 0.21 11.9 1.8 1.9 8.9 1.8 2.3 1 1 0 1 1 1 0 Ribosomal protein L5 Sulfatase_C PF14707.6 gi|452209394|ref|YP_007489508.1| - 0.28 11.9 2.9 16 6.2 0.4 2.1 2 0 0 2 2 2 0 C-terminal region of aryl-sulfatase TolA_bind_tri PF16331.5 gi|452209394|ref|YP_007489508.1| - 0.3 11.2 7.3 2.4 8.3 1.2 2.3 2 0 0 2 2 2 0 TolA binding protein trimerisation YkyA PF10368.9 gi|452209394|ref|YP_007489508.1| - 0.32 10.7 5.0 0.94 9.1 0.4 2.2 2 0 0 2 2 2 0 Putative cell-wall binding lipoprotein TBCC_N PF16752.5 gi|452209394|ref|YP_007489508.1| - 0.32 11.5 4.0 3.2 8.2 0.1 2.2 2 0 0 2 2 2 0 Tubulin-specific chaperone C N-terminal domain LXG PF04740.12 gi|452209394|ref|YP_007489508.1| - 0.37 10.5 8.0 3.4 7.3 0.5 2.1 2 0 0 2 2 2 0 LXG domain of WXG superfamily GAS PF13851.6 gi|452209394|ref|YP_007489508.1| - 0.38 10.1 7.0 1.8 7.9 0.5 2.1 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding CC2-LZ PF16516.5 gi|452209394|ref|YP_007489508.1| - 0.43 11.0 8.1 2 8.8 2.2 2.2 2 0 0 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator BST2 PF16716.5 gi|452209394|ref|YP_007489508.1| - 0.49 11.0 7.1 3.6 8.3 0.3 2.4 2 1 0 2 2 2 0 Bone marrow stromal antigen 2 EMP24_GP25L PF01105.24 gi|452209394|ref|YP_007489508.1| - 0.5 10.3 3.0 0.92 9.4 0.1 2.0 2 0 0 2 2 2 0 emp24/gp25L/p24 family/GOLD MCPsignal PF00015.21 gi|452209394|ref|YP_007489508.1| - 0.6 9.9 13.5 6.2 6.6 4.6 2.6 1 1 1 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain Ax_dynein_light PF10211.9 gi|452209394|ref|YP_007489508.1| - 0.6 10.0 5.6 7.8 6.4 0.4 2.1 2 0 0 2 2 2 0 Axonemal dynein light chain Tropomyosin PF00261.20 gi|452209394|ref|YP_007489508.1| - 0.6 9.4 8.8 0.43 9.9 0.3 2.1 2 0 0 2 2 2 0 Tropomyosin COG2 PF06148.11 gi|452209394|ref|YP_007489508.1| - 0.64 10.1 3.1 5.3 7.1 0.6 2.1 2 0 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF16 PF01519.16 gi|452209394|ref|YP_007489508.1| - 0.74 10.3 3.2 22 5.6 0.6 2.2 2 0 0 2 2 2 0 Protein of unknown function DUF16 Rho_Binding PF08912.11 gi|452209394|ref|YP_007489508.1| - 1.1 10.2 6.1 10 7.0 0.8 2.3 2 0 0 2 2 2 0 Rho Binding GIT_CC PF16559.5 gi|452209394|ref|YP_007489508.1| - 1.1 9.1 6.5 2.9 7.8 1.2 2.3 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor FlaC_arch PF05377.11 gi|452209394|ref|YP_007489508.1| - 1.4 9.4 4.2 15 6.1 0.2 2.7 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) AAA_13 PF13166.6 gi|452209394|ref|YP_007489508.1| - 1.5 7.4 6.1 3.8 6.0 1.3 2.0 2 0 0 2 2 2 0 AAA domain APG6_N PF17675.1 gi|452209394|ref|YP_007489508.1| - 1.6 9.3 13.9 4.8 7.7 4.7 2.1 1 1 0 2 2 2 0 Apg6 coiled-coil region ZapB PF06005.12 gi|452209394|ref|YP_007489508.1| - 1.9 9.0 11.6 2.2 8.8 1.6 3.1 2 1 1 3 3 3 0 Cell division protein ZapB DASH_Spc19 PF08287.11 gi|452209394|ref|YP_007489508.1| - 2 8.3 6.8 7.2 6.5 4.5 2.1 1 1 1 2 2 2 0 Spc19 DUF724 PF05266.14 gi|452209394|ref|YP_007489508.1| - 2.2 8.0 6.6 4.9 6.9 2.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF724) DUF5339 PF17274.2 gi|452209394|ref|YP_007489508.1| - 3.4 8.6 10.2 1.1 10.1 1.5 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5339) TPR_MLP1_2 PF07926.12 gi|452209394|ref|YP_007489508.1| - 4 7.5 12.3 6.5 6.8 3.2 2.5 2 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein SlyX PF04102.12 gi|452209394|ref|YP_007489508.1| - 4.2 8.0 8.2 6.3 7.5 0.6 2.5 2 1 0 2 2 2 0 SlyX PspC PF04024.12 gi|452209396|ref|YP_007489510.1| - 4e-26 90.6 1.6 4.6e-26 90.4 1.6 1.0 1 0 0 1 1 1 1 PspC domain NqrM PF04400.13 gi|452209396|ref|YP_007489510.1| - 0.12 12.1 0.1 0.18 11.6 0.1 1.3 1 0 0 1 1 1 0 (Na+)-NQR maturation NqrM AhpC-TSA PF00578.21 gi|452209398|ref|YP_007489512.1| - 2.8e-33 114.5 0.1 3.8e-33 114.0 0.1 1.2 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|452209398|ref|YP_007489512.1| - 8.3e-15 54.8 0.0 1.1e-14 54.4 0.0 1.2 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 gi|452209398|ref|YP_007489512.1| - 1.4e-14 53.6 1.1 1.8e-13 50.1 0.5 2.3 2 0 0 2 2 2 1 C-terminal domain of 1-Cys peroxiredoxin P_C10 PF14974.6 gi|452209398|ref|YP_007489512.1| - 0.0084 16.2 0.1 0.019 15.0 0.1 1.7 1 0 0 1 1 1 1 Protein C10 DDE_Tnp_IS66 PF03050.14 gi|452209399|ref|YP_007489513.1| - 1.2e-60 205.4 0.2 1.3e-60 205.3 0.2 1.0 1 0 0 1 1 1 1 Transposase IS66 family DDE_Tnp_IS240 PF13610.6 gi|452209399|ref|YP_007489513.1| - 7.6e-06 26.2 3.4 0.13 12.5 0.1 3.1 2 1 0 3 3 3 2 DDE domain DUF1572 PF07609.11 gi|452209399|ref|YP_007489513.1| - 0.047 13.5 0.1 0.074 12.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1572) Fzo_mitofusin PF04799.13 gi|452209399|ref|YP_007489513.1| - 0.17 11.4 1.9 0.88 9.1 0.2 2.2 2 0 0 2 2 2 0 fzo-like conserved region Cnn_1N PF07989.11 gi|452209399|ref|YP_007489513.1| - 3.6 7.8 8.7 16 5.7 2.2 2.6 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 P5CR_dimer PF14748.6 gi|452209400|ref|YP_007489514.1| - 3e-39 133.4 2.9 3e-39 133.4 2.9 1.8 2 0 0 2 2 2 1 Pyrroline-5-carboxylate reductase dimerisation F420_oxidored PF03807.17 gi|452209400|ref|YP_007489514.1| - 3.2e-21 75.7 1.4 8.1e-21 74.4 0.5 2.0 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|452209400|ref|YP_007489514.1| - 5.9e-06 26.5 0.5 1.4e-05 25.3 0.5 1.8 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_Gly3P_dh_N PF01210.23 gi|452209400|ref|YP_007489514.1| - 3.5e-05 23.8 3.2 0.00025 21.1 3.2 2.1 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Sacchrp_dh_C PF16653.5 gi|452209400|ref|YP_007489514.1| - 0.0061 16.7 1.5 0.024 14.8 0.0 2.2 2 0 0 2 2 2 1 Saccharopine dehydrogenase C-terminal domain Rossmann-like PF10727.9 gi|452209400|ref|YP_007489514.1| - 0.019 14.8 0.2 0.068 13.0 0.2 1.9 1 1 0 1 1 1 0 Rossmann-like domain PDH PF02153.17 gi|452209400|ref|YP_007489514.1| - 0.022 13.8 0.0 0.042 12.8 0.0 1.4 2 0 0 2 2 2 0 Prephenate dehydrogenase DUF1547 PF07577.11 gi|452209400|ref|YP_007489514.1| - 0.04 14.3 0.0 0.079 13.3 0.0 1.5 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1547) DapB_N PF01113.20 gi|452209400|ref|YP_007489514.1| - 0.085 13.0 0.1 0.24 11.5 0.1 1.8 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus ApbA PF02558.16 gi|452209400|ref|YP_007489514.1| - 0.58 9.8 3.0 2 8.0 3.0 1.9 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA AA_kinase PF00696.28 gi|452209401|ref|YP_007489515.1| - 1.1e-40 139.8 0.1 1.4e-40 139.4 0.1 1.2 1 0 0 1 1 1 1 Amino acid kinase family PUA PF01472.20 gi|452209401|ref|YP_007489515.1| - 4.2e-18 65.1 0.6 4.2e-18 65.1 0.6 1.8 2 0 0 2 2 2 1 PUA domain Aldedh PF00171.22 gi|452209402|ref|YP_007489516.1| - 4.8e-16 58.3 0.0 4.1e-12 45.4 0.0 2.2 2 0 0 2 2 2 2 Aldehyde dehydrogenase family FlgN PF05130.12 gi|452209402|ref|YP_007489516.1| - 0.05 14.1 1.2 0.11 13.1 1.2 1.5 1 0 0 1 1 1 0 FlgN protein Toprim_4 PF13662.6 gi|452209404|ref|YP_007489518.1| - 1.1e-06 29.0 0.0 5.3e-06 26.8 0.0 2.0 1 1 0 1 1 1 1 Toprim domain Toprim PF01751.22 gi|452209404|ref|YP_007489518.1| - 1.8e-05 24.9 0.2 0.00048 20.3 0.2 2.4 1 1 0 1 1 1 1 Toprim domain Toprim_2 PF13155.6 gi|452209404|ref|YP_007489518.1| - 0.026 15.0 0.0 0.066 13.7 0.0 1.7 1 1 0 1 1 1 0 Toprim-like DUF167 PF02594.16 gi|452209405|ref|YP_007489519.1| - 5.5e-20 71.3 0.0 6.8e-20 71.0 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 Amidohydro_1 PF01979.20 gi|452209406|ref|YP_007489520.1| - 1e-23 84.2 0.1 1e-22 81.0 0.1 1.9 1 1 0 1 1 1 1 Amidohydrolase family A_deaminase PF00962.22 gi|452209406|ref|YP_007489520.1| - 2e-08 33.9 0.0 2.9e-08 33.4 0.0 1.1 1 0 0 1 1 1 1 Adenosine/AMP deaminase Amidohydro_3 PF07969.11 gi|452209406|ref|YP_007489520.1| - 2.3e-05 24.1 0.0 0.00031 20.4 0.0 2.2 2 1 0 2 2 2 1 Amidohydrolase family Peripla_BP_2 PF01497.18 gi|452209406|ref|YP_007489520.1| - 0.026 14.1 0.0 0.039 13.5 0.0 1.2 1 0 0 1 1 1 0 Periplasmic binding protein CRM1_repeat PF18777.1 gi|452209406|ref|YP_007489520.1| - 0.071 12.6 0.2 0.14 11.7 0.2 1.4 1 0 0 1 1 1 0 Chromosome region maintenance or exportin repeat Usp PF00582.26 gi|452209407|ref|YP_007489521.1| - 4.9e-38 130.8 0.1 5.6e-38 130.6 0.1 1.0 1 0 0 1 1 1 1 Universal stress protein family NTP_transf_7 PF07984.12 gi|452209407|ref|YP_007489521.1| - 0.11 11.7 0.0 0.13 11.5 0.0 1.1 1 0 0 1 1 1 0 Nucleotidyltransferase CBS PF00571.28 gi|452209408|ref|YP_007489522.1| - 5.3e-45 151.7 12.2 7.2e-15 55.2 0.1 4.2 4 0 0 4 4 4 4 CBS domain GAF PF01590.26 gi|452209408|ref|YP_007489522.1| - 0.0041 17.8 0.1 0.32 11.6 0.0 2.6 1 1 1 2 2 2 1 GAF domain Peptidase_S55 PF05580.12 gi|452209408|ref|YP_007489522.1| - 0.019 14.9 0.2 1.4 8.8 0.0 2.3 2 0 0 2 2 2 0 SpoIVB peptidase S55 H_kinase_N PF12282.8 gi|452209408|ref|YP_007489522.1| - 0.034 14.1 0.6 8.6 6.3 0.1 2.4 2 0 0 2 2 2 0 Signal transduction histidine kinase CAAD PF14159.6 gi|452209408|ref|YP_007489522.1| - 0.051 13.4 0.4 1.7 8.5 0.2 3.0 3 0 0 3 3 3 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase CxxCxxCC PF03692.15 gi|452209409|ref|YP_007489523.1| - 8e-12 45.7 2.1 2.2e-11 44.3 2.1 1.7 1 1 0 1 1 1 1 Putative zinc- or iron-chelating domain DUF5350 PF17299.2 gi|452209410|ref|YP_007489524.1| - 1.6e-27 95.7 6.4 1.7e-27 95.6 6.4 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF5350) CRCB PF02537.15 gi|452209411|ref|YP_007489525.1| - 3.3e-22 78.6 6.0 4e-22 78.4 6.0 1.0 1 0 0 1 1 1 1 CrcB-like protein, Camphor Resistance (CrcB) CRCB PF02537.15 gi|452209412|ref|YP_007489526.1| - 8.8e-18 64.4 10.3 1.1e-17 64.1 10.3 1.0 1 0 0 1 1 1 1 CrcB-like protein, Camphor Resistance (CrcB) Phage_holin_3_6 PF07332.11 gi|452209412|ref|YP_007489526.1| - 7.3 6.7 7.6 0.49 10.5 1.4 1.9 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III MoeA_N PF03453.17 gi|452209413|ref|YP_007489527.1| - 3.1e-43 147.2 0.2 5.6e-43 146.4 0.2 1.4 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 gi|452209413|ref|YP_007489527.1| - 1.1e-24 86.8 0.0 1.9e-24 86.0 0.0 1.4 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.15 gi|452209413|ref|YP_007489527.1| - 1.5e-12 47.5 2.3 1.3e-11 44.5 0.0 2.7 3 0 0 3 3 3 1 MoeA C-terminal region (domain IV) MutL PF13941.6 gi|452209413|ref|YP_007489527.1| - 0.1 11.2 0.0 0.16 10.6 0.0 1.2 1 0 0 1 1 1 0 MutL protein ThiS PF02597.20 gi|452209414|ref|YP_007489528.1| - 1.9e-19 70.0 0.1 2.3e-19 69.8 0.1 1.1 1 0 0 1 1 1 1 ThiS family Colicin_Pyocin PF01320.18 gi|452209414|ref|YP_007489528.1| - 0.023 14.8 0.0 0.028 14.5 0.0 1.2 1 0 0 1 1 1 0 Colicin immunity protein / pyocin immunity protein PMT_2 PF13231.6 gi|452209415|ref|YP_007489529.1| - 4.2e-12 46.6 8.5 4.2e-12 46.6 8.5 4.0 5 1 0 5 5 5 1 Dolichyl-phosphate-mannose-protein mannosyltransferase PMT PF02366.18 gi|452209415|ref|YP_007489529.1| - 2.5e-09 37.1 15.8 2.5e-09 37.1 15.8 2.3 1 1 0 1 1 1 1 Dolichyl-phosphate-mannose-protein mannosyltransferase CitMHS PF03600.16 gi|452209415|ref|YP_007489529.1| - 0.049 12.8 4.0 0.12 11.5 3.8 1.8 1 1 0 1 1 1 0 Citrate transporter CBS PF00571.28 gi|452209416|ref|YP_007489530.1| - 3.9e-05 24.0 0.1 5.6e-05 23.5 0.1 1.2 1 0 0 1 1 1 1 CBS domain MAS20 PF02064.15 gi|452209416|ref|YP_007489530.1| - 0.23 11.5 2.9 0.22 11.6 2.4 1.3 1 1 0 1 1 1 0 MAS20 protein import receptor Na_H_Exchanger PF00999.21 gi|452209417|ref|YP_007489531.1| - 3.4e-47 161.1 52.0 3.8e-47 160.9 52.0 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family E1-E2_ATPase PF00122.20 gi|452209418|ref|YP_007489532.1| - 2.4e-56 190.1 0.2 2.4e-56 190.1 0.2 3.5 4 0 0 4 4 4 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 gi|452209418|ref|YP_007489532.1| - 2.2e-44 151.3 9.8 2.2e-44 151.3 9.8 2.8 3 0 0 3 3 3 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 gi|452209418|ref|YP_007489532.1| - 1.4e-25 90.8 1.3 2.9e-25 89.8 0.2 2.2 2 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 gi|452209418|ref|YP_007489532.1| - 1.3e-22 79.7 0.0 3.6e-22 78.2 0.0 1.8 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Cation_ATPase_N PF00690.26 gi|452209418|ref|YP_007489532.1| - 6.8e-20 70.5 0.0 1.6e-19 69.4 0.0 1.7 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Hydrolase_3 PF08282.12 gi|452209418|ref|YP_007489532.1| - 2.1e-05 24.4 1.4 0.0055 16.5 1.0 2.3 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|452209418|ref|YP_007489532.1| - 7.8e-05 23.2 0.0 0.00019 21.9 0.0 1.7 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Radical_SAM PF04055.21 gi|452209418|ref|YP_007489532.1| - 0.1 13.0 0.2 0.89 9.9 0.1 2.3 1 1 0 1 1 1 0 Radical SAM superfamily Amino_oxidase PF01593.24 gi|452209419|ref|YP_007489533.1| - 2.9e-31 109.2 0.0 3.5e-31 109.0 0.0 1.0 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase DAO PF01266.24 gi|452209419|ref|YP_007489533.1| - 3.5e-16 59.7 0.0 1.7e-08 34.4 0.0 2.1 2 0 0 2 2 2 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|452209419|ref|YP_007489533.1| - 2.5e-10 40.4 0.2 7.9e-10 38.8 0.0 1.9 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 gi|452209419|ref|YP_007489533.1| - 1.4e-06 27.6 0.0 0.00029 20.0 0.0 2.6 3 0 0 3 3 3 2 FAD binding domain HI0933_like PF03486.14 gi|452209419|ref|YP_007489533.1| - 0.00035 19.4 0.0 0.31 9.7 0.0 2.2 2 0 0 2 2 2 2 HI0933-like protein Thi4 PF01946.17 gi|452209419|ref|YP_007489533.1| - 0.0033 16.7 0.7 0.0082 15.4 0.1 1.9 2 0 0 2 2 2 1 Thi4 family Pyr_redox_2 PF07992.14 gi|452209419|ref|YP_007489533.1| - 0.0036 16.6 0.0 0.03 13.5 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|452209419|ref|YP_007489533.1| - 0.022 15.3 0.2 11 6.6 0.0 2.6 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|452209419|ref|YP_007489533.1| - 0.035 13.2 0.0 0.14 11.2 0.0 1.8 2 0 0 2 2 2 0 Glucose inhibited division protein A FAD_oxidored PF12831.7 gi|452209419|ref|YP_007489533.1| - 0.079 12.3 0.0 0.12 11.7 0.0 1.3 1 0 0 1 1 1 0 FAD dependent oxidoreductase NAD_binding_9 PF13454.6 gi|452209419|ref|YP_007489533.1| - 0.21 11.5 0.1 0.81 9.7 0.0 2.0 3 0 0 3 3 3 0 FAD-NAD(P)-binding DUF3303 PF11746.8 gi|452209420|ref|YP_007489534.1| - 1.4e-06 28.4 0.0 1.8e-06 28.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3303) tify PF06200.14 gi|452209420|ref|YP_007489534.1| - 0.18 11.1 0.2 0.3 10.5 0.2 1.2 1 0 0 1 1 1 0 tify domain Aldedh PF00171.22 gi|452209421|ref|YP_007489535.1| - 1.3e-165 551.4 0.0 1.6e-165 551.1 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 gi|452209421|ref|YP_007489535.1| - 0.0099 15.0 0.0 0.02 14.0 0.0 1.5 2 0 0 2 2 2 1 Acyl-CoA reductase (LuxC) DUF2298 PF10060.9 gi|452209423|ref|YP_007489537.1| - 2.2e-109 366.5 40.1 2.9e-109 366.0 40.1 1.1 1 0 0 1 1 1 1 Uncharacterized membrane protein (DUF2298) LPG_synthase_TM PF03706.13 gi|452209424|ref|YP_007489538.1| - 7.2e-20 71.7 7.2 9.7e-20 71.3 7.2 1.1 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region HTH_5 PF01022.20 gi|452209425|ref|YP_007489539.1| - 1.7e-15 56.6 1.0 3e-15 55.8 1.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|452209425|ref|YP_007489539.1| - 3e-13 49.6 0.8 5.4e-13 48.8 0.8 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|452209425|ref|YP_007489539.1| - 0.0013 18.6 0.2 0.0027 17.6 0.2 1.6 1 0 0 1 1 1 1 MarR family DUF2513 PF10711.9 gi|452209425|ref|YP_007489539.1| - 0.0025 18.1 0.0 0.0032 17.7 0.0 1.3 1 0 0 1 1 1 1 Hypothetical protein (DUF2513) HTH_27 PF13463.6 gi|452209425|ref|YP_007489539.1| - 0.0033 17.9 0.0 0.0084 16.6 0.0 1.7 1 0 0 1 1 1 1 Winged helix DNA-binding domain ArsR PF09824.9 gi|452209425|ref|YP_007489539.1| - 0.0062 16.2 0.0 0.008 15.8 0.0 1.3 1 0 0 1 1 1 1 ArsR transcriptional regulator HTH_45 PF14947.6 gi|452209425|ref|YP_007489539.1| - 0.017 15.1 0.0 0.026 14.5 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix HTH_24 PF13412.6 gi|452209425|ref|YP_007489539.1| - 0.049 13.2 0.1 0.57 9.8 0.1 2.3 1 1 0 1 1 1 0 Winged helix-turn-helix DNA-binding DUF505 PF04458.12 gi|452209425|ref|YP_007489539.1| - 0.049 12.0 0.2 0.099 11.0 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF505) HTH_34 PF13601.6 gi|452209425|ref|YP_007489539.1| - 0.1 12.8 0.1 0.15 12.3 0.1 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain PadR PF03551.14 gi|452209425|ref|YP_007489539.1| - 0.1 12.6 0.1 0.19 11.7 0.1 1.6 1 1 0 1 1 1 0 Transcriptional regulator PadR-like family NikR_C PF08753.11 gi|452209426|ref|YP_007489540.1| - 1.3e-33 115.0 2.8 1.8e-33 114.6 2.8 1.2 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.21 gi|452209426|ref|YP_007489540.1| - 2.7e-09 36.6 2.0 3e-09 36.5 0.1 1.9 2 0 0 2 2 2 1 Ribbon-helix-helix protein, copG family HicB_lk_antitox PF15919.5 gi|452209426|ref|YP_007489540.1| - 0.0016 18.5 0.0 0.012 15.7 0.0 2.1 2 0 0 2 2 2 1 HicB_like antitoxin of bacterial toxin-antitoxin system RHH_8 PF17723.1 gi|452209426|ref|YP_007489540.1| - 0.094 12.9 0.0 0.17 12.1 0.0 1.4 1 1 0 1 1 1 0 Ribbon-Helix-Helix transcriptional regulator family OpcA_G6PD_assem PF10128.9 gi|452209426|ref|YP_007489540.1| - 0.18 11.2 0.0 0.23 10.9 0.0 1.2 1 0 0 1 1 1 0 Glucose-6-phosphate dehydrogenase subunit AMP-binding PF00501.28 gi|452209427|ref|YP_007489541.1| - 2.2e-17 62.8 0.0 2.9e-17 62.4 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme SIS_2 PF13580.6 gi|452209427|ref|YP_007489541.1| - 0.0042 17.1 0.0 0.029 14.4 0.0 2.0 1 1 1 2 2 2 1 SIS domain CMD PF02627.20 gi|452209429|ref|YP_007489543.1| - 2.8e-18 65.8 0.0 3.5e-18 65.4 0.0 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family AlaE PF06610.13 gi|452209429|ref|YP_007489543.1| - 0.053 13.5 0.5 0.3 11.1 0.1 1.9 1 1 1 2 2 2 0 L-alanine exporter TrmB PF01978.19 gi|452209430|ref|YP_007489544.1| - 8.1e-05 22.4 0.0 0.37 10.7 0.0 2.2 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB LIM PF00412.22 gi|452209430|ref|YP_007489544.1| - 0.001 19.2 0.9 0.002 18.3 0.9 1.5 1 0 0 1 1 1 1 LIM domain Penicillinase_R PF03965.16 gi|452209430|ref|YP_007489544.1| - 0.0011 19.2 0.0 0.034 14.5 0.0 2.1 2 0 0 2 2 2 1 Penicillinase repressor HTH_20 PF12840.7 gi|452209430|ref|YP_007489544.1| - 0.0033 17.5 0.0 0.038 14.1 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain PadR PF03551.14 gi|452209430|ref|YP_007489544.1| - 0.0061 16.5 0.0 0.012 15.6 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_IclR PF09339.10 gi|452209430|ref|YP_007489544.1| - 0.0064 16.3 0.0 0.019 14.8 0.0 2.0 1 1 0 1 1 1 1 IclR helix-turn-helix domain Prot_inhib_II PF02428.15 gi|452209430|ref|YP_007489544.1| - 0.038 14.4 0.4 0.068 13.6 0.4 1.4 1 0 0 1 1 1 0 Potato type II proteinase inhibitor family TFIIE_alpha PF02002.17 gi|452209430|ref|YP_007489544.1| - 0.044 13.6 0.1 0.091 12.6 0.1 1.4 1 0 0 1 1 1 0 TFIIE alpha subunit HTH_24 PF13412.6 gi|452209430|ref|YP_007489544.1| - 0.061 12.9 0.1 0.67 9.6 0.1 2.4 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_9 PF08221.11 gi|452209430|ref|YP_007489544.1| - 0.096 12.8 0.0 0.26 11.4 0.0 1.6 2 0 0 2 2 2 0 RNA polymerase III subunit RPC82 helix-turn-helix domain zf-FCS PF06467.14 gi|452209430|ref|YP_007489544.1| - 0.19 11.7 1.8 0.41 10.6 1.8 1.5 1 0 0 1 1 1 0 MYM-type Zinc finger with FCS sequence motif Pyr_excise PF03013.14 gi|452209431|ref|YP_007489545.1| - 8.8e-05 22.5 0.1 0.00012 22.0 0.1 1.3 1 1 0 1 1 1 1 Pyrimidine dimer DNA glycosylase PPC PF04151.15 gi|452209432|ref|YP_007489546.1| - 0.021 15.9 0.1 0.8 10.8 0.1 2.5 2 0 0 2 2 2 0 Bacterial pre-peptidase C-terminal domain SLAC1 PF03595.17 gi|452209432|ref|YP_007489546.1| - 0.022 14.0 6.5 0.039 13.2 6.5 1.4 1 0 0 1 1 1 0 Voltage-dependent anion channel DUF1129 PF06570.11 gi|452209432|ref|YP_007489546.1| - 0.026 14.0 0.6 0.041 13.4 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) AhpC-TSA PF00578.21 gi|452209433|ref|YP_007489547.1| - 2.4e-11 43.6 0.0 2.9e-11 43.3 0.0 1.3 1 1 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|452209433|ref|YP_007489547.1| - 0.022 14.5 0.0 0.024 14.4 0.0 1.2 1 0 0 1 1 1 0 Redoxin DUF378 PF04070.12 gi|452209434|ref|YP_007489548.1| - 1.3e-25 89.0 10.4 1.5e-25 88.8 10.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF378) TssN PF17555.2 gi|452209434|ref|YP_007489548.1| - 0.21 11.0 1.7 0.24 10.8 1.7 1.0 1 0 0 1 1 1 0 Type VI secretion system, TssN DUF751 PF05421.11 gi|452209434|ref|YP_007489548.1| - 0.22 12.3 3.4 2.9 8.7 0.1 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF751) PsbT PF01405.17 gi|452209434|ref|YP_007489548.1| - 2.3 8.1 7.3 0.26 11.1 1.9 2.1 2 0 0 2 2 2 0 Photosystem II reaction centre T protein Lactamase_B_2 PF12706.7 gi|452209436|ref|YP_007489550.1| - 3.7e-30 104.9 0.2 4.9e-30 104.6 0.2 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|452209436|ref|YP_007489550.1| - 7e-21 75.1 0.5 1.1e-20 74.4 0.5 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.6 gi|452209436|ref|YP_007489550.1| - 2.6e-08 33.9 0.8 5.5e-08 32.9 0.8 1.5 1 1 0 1 1 1 1 Beta-lactamase superfamily domain AAA PF00004.29 gi|452209437|ref|YP_007489551.1| - 4.8e-38 130.6 0.2 3.7e-37 127.7 0.0 2.3 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|452209437|ref|YP_007489551.1| - 1e-11 44.4 0.3 3.1e-11 42.9 0.3 1.9 1 0 0 1 1 1 1 AAA+ lid domain AAA_5 PF07728.14 gi|452209437|ref|YP_007489551.1| - 6.2e-06 26.3 0.0 3.2e-05 24.0 0.0 2.3 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 gi|452209437|ref|YP_007489551.1| - 7.8e-06 26.5 0.0 3.6e-05 24.3 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|452209437|ref|YP_007489551.1| - 2.3e-05 24.8 0.1 0.00064 20.2 0.1 2.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|452209437|ref|YP_007489551.1| - 0.00013 22.2 0.4 0.0094 16.2 0.0 3.1 3 1 1 4 4 3 1 AAA domain AAA_2 PF07724.14 gi|452209437|ref|YP_007489551.1| - 0.00014 22.0 1.1 0.00076 19.6 0.0 2.4 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 gi|452209437|ref|YP_007489551.1| - 0.00019 21.2 0.1 0.00036 20.3 0.1 1.6 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_33 PF13671.6 gi|452209437|ref|YP_007489551.1| - 0.00029 21.0 0.0 0.00061 20.0 0.0 1.6 1 1 0 1 1 1 1 AAA domain DUF815 PF05673.13 gi|452209437|ref|YP_007489551.1| - 0.00068 18.9 0.1 0.0013 18.0 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_17 PF13207.6 gi|452209437|ref|YP_007489551.1| - 0.00072 20.0 1.2 0.073 13.5 0.0 2.8 2 1 0 2 2 2 1 AAA domain TIP49 PF06068.13 gi|452209437|ref|YP_007489551.1| - 0.00078 18.8 0.3 0.0047 16.2 0.0 2.3 2 1 0 3 3 3 1 TIP49 P-loop domain AAA_7 PF12775.7 gi|452209437|ref|YP_007489551.1| - 0.00098 18.7 0.0 0.0021 17.6 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_28 PF13521.6 gi|452209437|ref|YP_007489551.1| - 0.0014 18.9 0.0 0.0038 17.5 0.0 1.9 1 1 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 gi|452209437|ref|YP_007489551.1| - 0.0041 16.5 0.0 0.012 15.0 0.0 1.7 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_11 PF13086.6 gi|452209437|ref|YP_007489551.1| - 0.0044 16.8 0.8 0.03 14.1 0.1 2.1 1 1 1 2 2 2 1 AAA domain IstB_IS21 PF01695.17 gi|452209437|ref|YP_007489551.1| - 0.0046 16.7 0.0 0.013 15.3 0.0 1.7 1 1 0 1 1 1 1 IstB-like ATP binding protein SKI PF01202.22 gi|452209437|ref|YP_007489551.1| - 0.01 16.0 0.0 0.027 14.6 0.0 1.8 1 0 0 1 1 1 0 Shikimate kinase ResIII PF04851.15 gi|452209437|ref|YP_007489551.1| - 0.011 15.7 0.0 0.028 14.4 0.0 1.7 2 0 0 2 2 1 0 Type III restriction enzyme, res subunit Cytidylate_kin PF02224.18 gi|452209437|ref|YP_007489551.1| - 0.013 15.2 0.5 0.054 13.2 0.0 2.1 2 1 0 2 2 2 0 Cytidylate kinase AAA_14 PF13173.6 gi|452209437|ref|YP_007489551.1| - 0.028 14.4 0.1 0.15 12.1 0.0 2.3 2 2 1 3 3 2 0 AAA domain Rad17 PF03215.15 gi|452209437|ref|YP_007489551.1| - 0.051 13.5 0.0 0.13 12.1 0.0 1.7 1 1 0 1 1 1 0 Rad17 P-loop domain AAA_25 PF13481.6 gi|452209437|ref|YP_007489551.1| - 0.059 12.9 1.9 1.1 8.8 0.0 2.7 2 1 1 3 3 3 0 AAA domain CPT PF07931.12 gi|452209437|ref|YP_007489551.1| - 0.079 12.8 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein MmcB-like PF06319.12 gi|452209437|ref|YP_007489551.1| - 0.085 12.5 0.0 6.3 6.5 0.0 2.4 1 1 1 2 2 2 0 DNA repair protein MmcB-like AAA_24 PF13479.6 gi|452209437|ref|YP_007489551.1| - 0.097 12.4 0.0 0.24 11.1 0.0 1.8 1 1 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 gi|452209437|ref|YP_007489551.1| - 0.098 12.7 0.1 0.42 10.7 0.0 2.1 2 0 0 2 2 2 0 50S ribosome-binding GTPase Sigma54_activat PF00158.26 gi|452209437|ref|YP_007489551.1| - 0.1 12.3 0.0 0.27 10.9 0.0 1.7 1 0 0 1 1 1 0 Sigma-54 interaction domain Sigma54_activ_2 PF14532.6 gi|452209437|ref|YP_007489551.1| - 0.11 12.6 0.0 0.26 11.4 0.0 1.6 1 0 0 1 1 1 0 Sigma-54 interaction domain RNA_helicase PF00910.22 gi|452209437|ref|YP_007489551.1| - 0.13 12.6 0.0 0.26 11.7 0.0 1.6 1 0 0 1 1 1 0 RNA helicase ABC_tran PF00005.27 gi|452209437|ref|YP_007489551.1| - 0.16 12.5 0.1 1 9.9 0.0 2.1 1 1 1 2 2 2 0 ABC transporter AAA_23 PF13476.6 gi|452209437|ref|YP_007489551.1| - 7 7.1 9.3 17 5.9 0.0 2.8 2 1 1 3 3 3 0 AAA domain SAICAR_synt PF01259.18 gi|452209438|ref|YP_007489552.1| - 3.2e-60 203.9 0.1 3.8e-60 203.6 0.1 1.1 1 0 0 1 1 1 1 SAICAR synthetase Nre_N PF04894.12 gi|452209439|ref|YP_007489553.1| - 5e-104 347.9 0.0 6e-104 347.6 0.0 1.1 1 0 0 1 1 1 1 Archaeal Nre, N-terminal Nre_C PF04895.12 gi|452209439|ref|YP_007489553.1| - 8.2e-40 135.1 0.0 1.3e-39 134.5 0.0 1.3 1 0 0 1 1 1 1 Archaeal Nre, C-terminal Sigma70_r4 PF04545.16 gi|452209440|ref|YP_007489554.1| - 0.00078 18.9 0.0 0.0018 17.7 0.0 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_3 PF01381.22 gi|452209440|ref|YP_007489554.1| - 0.001 19.1 0.0 0.0018 18.3 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix Sigma70_r4_2 PF08281.12 gi|452209440|ref|YP_007489554.1| - 0.0031 17.2 0.0 0.0089 15.7 0.0 1.7 1 1 1 2 2 2 1 Sigma-70, region 4 HTH_24 PF13412.6 gi|452209440|ref|YP_007489554.1| - 0.0044 16.6 0.0 0.008 15.7 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_40 PF14493.6 gi|452209440|ref|YP_007489554.1| - 0.014 15.9 0.0 0.017 15.6 0.0 1.1 1 0 0 1 1 1 0 Helix-turn-helix domain MarR_2 PF12802.7 gi|452209440|ref|YP_007489554.1| - 0.038 13.9 0.0 0.075 12.9 0.0 1.5 1 0 0 1 1 1 0 MarR family HTH_Crp_2 PF13545.6 gi|452209440|ref|YP_007489554.1| - 0.069 13.1 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_26 PF13443.6 gi|452209440|ref|YP_007489554.1| - 0.094 13.2 0.0 0.14 12.6 0.0 1.3 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain SUI1 PF01253.22 gi|452209441|ref|YP_007489555.1| - 1e-20 74.0 0.1 1.3e-20 73.7 0.1 1.1 1 0 0 1 1 1 1 Translation initiation factor SUI1 DTW PF03942.15 gi|452209441|ref|YP_007489555.1| - 0.016 15.0 0.7 0.021 14.5 0.7 1.2 1 0 0 1 1 1 0 DTW domain Img2 PF05046.14 gi|452209441|ref|YP_007489555.1| - 0.032 14.5 0.2 0.079 13.3 0.2 1.7 1 1 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) AIRS PF00586.24 gi|452209444|ref|YP_007489558.1| - 1e-48 163.9 0.5 8.5e-25 87.2 0.0 3.5 3 0 0 3 3 3 2 AIR synthase related protein, N-terminal domain AIRS_C PF02769.22 gi|452209444|ref|YP_007489558.1| - 4.7e-44 150.3 7.3 2.7e-32 112.1 0.3 2.3 2 0 0 2 2 2 2 AIR synthase related protein, C-terminal domain FGAR-AT_linker PF18072.1 gi|452209444|ref|YP_007489558.1| - 3.8e-08 33.7 0.3 2.1e-07 31.3 0.0 2.3 2 0 0 2 2 2 1 Formylglycinamide ribonucleotide amidotransferase linker domain Glyco_hydro_57 PF03065.15 gi|452209446|ref|YP_007489560.1| - 1.6e-48 165.6 0.0 2.4e-48 165.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 57 Glyco_hydro_57 PF03065.15 gi|452209447|ref|YP_007489561.1| - 2.1e-72 244.1 0.2 2.9e-72 243.6 0.2 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 57 Polysacc_deac_1 PF01522.21 gi|452209447|ref|YP_007489561.1| - 0.00011 22.1 0.0 0.00018 21.4 0.0 1.3 1 0 0 1 1 1 1 Polysaccharide deacetylase V4R PF02830.18 gi|452209448|ref|YP_007489562.1| - 3.1e-19 68.7 0.0 7.4e-19 67.5 0.0 1.7 1 0 0 1 1 1 1 V4R domain Glyco_hydro_15 PF00723.21 gi|452209449|ref|YP_007489563.1| - 1.3e-13 50.5 0.0 7e-07 28.4 0.2 3.4 2 1 1 3 3 3 3 Glycosyl hydrolases family 15 Glucodextran_N PF09137.11 gi|452209449|ref|YP_007489563.1| - 0.00074 19.1 0.0 0.0011 18.6 0.0 1.1 1 0 0 1 1 1 1 Glucodextranase, domain N DUF4264 PF14084.6 gi|452209450|ref|YP_007489564.1| - 0.021 14.5 0.0 0.029 14.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4264) LRR_8 PF13855.6 gi|452209450|ref|YP_007489564.1| - 0.084 12.6 0.0 0.084 12.6 0.0 1.0 1 0 0 1 1 1 0 Leucine rich repeat tRNA-synt_2b PF00587.25 gi|452209451|ref|YP_007489565.1| - 1.9e-31 109.4 0.0 5.6e-31 107.9 0.0 1.7 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.22 gi|452209451|ref|YP_007489565.1| - 3.1e-28 98.2 2.2 5.2e-28 97.4 2.2 1.4 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain MIP-T3_C PF17749.1 gi|452209451|ref|YP_007489565.1| - 0.048 13.6 1.5 0.081 12.9 1.5 1.3 1 0 0 1 1 1 0 Microtubule-binding protein MIP-T3 C-terminal region Laminin_I PF06008.14 gi|452209451|ref|YP_007489565.1| - 0.054 13.2 0.1 0.087 12.5 0.1 1.3 1 0 0 1 1 1 0 Laminin Domain I DUF5082 PF16888.5 gi|452209451|ref|YP_007489565.1| - 0.073 13.4 1.7 0.11 12.7 1.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5082) GldM_N PF12081.8 gi|452209451|ref|YP_007489565.1| - 0.12 12.4 0.1 0.27 11.3 0.1 1.5 1 0 0 1 1 1 0 GldM N-terminal domain DivIC PF04977.15 gi|452209451|ref|YP_007489565.1| - 0.61 9.9 3.9 2.9 7.7 3.9 2.0 1 1 0 1 1 1 0 Septum formation initiator Peptidase_S49 PF01343.18 gi|452209452|ref|YP_007489566.1| - 5.3e-45 153.1 0.1 9.6e-45 152.3 0.1 1.4 1 0 0 1 1 1 1 Peptidase family S49 Zip PF02535.22 gi|452209452|ref|YP_007489566.1| - 0.0015 17.8 0.1 0.0021 17.3 0.1 1.1 1 0 0 1 1 1 1 ZIP Zinc transporter CLP_protease PF00574.23 gi|452209452|ref|YP_007489566.1| - 0.0029 17.5 0.7 0.021 14.7 0.2 2.1 2 0 0 2 2 2 1 Clp protease Ligase_CoA PF00549.19 gi|452209452|ref|YP_007489566.1| - 0.012 15.4 0.1 0.027 14.3 0.1 1.5 1 0 0 1 1 1 0 CoA-ligase p25-alpha PF05517.12 gi|452209452|ref|YP_007489566.1| - 0.025 14.7 0.6 2.5 8.3 0.1 2.3 2 0 0 2 2 2 0 p25-alpha Asparaginase_C PF17763.1 gi|452209452|ref|YP_007489566.1| - 0.12 12.6 0.2 0.27 11.5 0.2 1.6 1 0 0 1 1 1 0 Glutaminase/Asparaginase C-terminal domain DUF3568 PF12092.8 gi|452209452|ref|YP_007489566.1| - 3.8 7.6 6.7 0.69 10.0 1.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3568) tRNA-synt_1g PF09334.11 gi|452209453|ref|YP_007489567.1| - 1.1e-154 514.9 0.0 1.4e-154 514.6 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA_bind PF01588.20 gi|452209453|ref|YP_007489567.1| - 6.2e-27 93.6 2.9 6.3e-27 93.5 0.4 2.3 2 0 0 2 2 2 1 Putative tRNA binding domain Anticodon_1 PF08264.13 gi|452209453|ref|YP_007489567.1| - 4.1e-22 78.8 0.1 6.8e-22 78.1 0.1 1.3 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1 PF00133.22 gi|452209453|ref|YP_007489567.1| - 5.3e-18 64.6 0.0 9.6e-10 37.3 0.0 3.9 3 1 0 3 3 3 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1e PF01406.19 gi|452209453|ref|YP_007489567.1| - 1.6e-16 60.6 0.0 1.9e-10 40.6 0.0 3.2 3 0 0 3 3 3 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 gi|452209453|ref|YP_007489567.1| - 0.0098 14.8 0.0 0.13 11.2 0.0 2.2 2 0 0 2 2 2 1 tRNA synthetases class I (K) TackOD1 PF18551.1 gi|452209453|ref|YP_007489567.1| - 0.072 12.7 0.2 0.14 11.8 0.2 1.3 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 zf-RING_7 PF02591.15 gi|452209453|ref|YP_007489567.1| - 1.4 9.1 3.8 3 8.1 0.1 3.0 2 0 0 2 2 2 0 C4-type zinc ribbon domain DZR PF12773.7 gi|452209453|ref|YP_007489567.1| - 1.8 8.6 8.6 9 6.4 8.6 2.1 1 1 0 1 1 1 0 Double zinc ribbon CYTH PF01928.21 gi|452209454|ref|YP_007489568.1| - 9.5e-40 136.4 0.1 1.1e-39 136.3 0.1 1.0 1 0 0 1 1 1 1 CYTH domain DUF3954 PF13128.6 gi|452209454|ref|YP_007489568.1| - 0.12 12.2 0.2 1.5 8.7 0.0 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF3954) OB_aCoA_assoc PF01796.17 gi|452209455|ref|YP_007489569.1| - 1.3e-18 66.7 0.0 2e-18 66.1 0.0 1.2 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated DUF35_N PF12172.8 gi|452209455|ref|YP_007489569.1| - 1e-10 41.3 0.7 1.4e-10 40.8 0.7 1.3 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) Thiolase_N PF00108.23 gi|452209456|ref|YP_007489570.1| - 2.3e-24 86.2 2.2 6e-24 84.8 2.2 1.7 1 1 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|452209456|ref|YP_007489570.1| - 2.2e-12 46.7 2.5 1.4e-11 44.1 1.7 2.8 2 1 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|452209456|ref|YP_007489570.1| - 1.9e-06 27.6 4.6 7.1e-06 25.8 4.3 1.9 1 1 1 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 gi|452209456|ref|YP_007489570.1| - 0.038 14.0 0.1 0.038 14.0 0.1 3.1 4 0 0 4 4 4 0 Beta-ketoacyl synthase, C-terminal domain ACP_syn_III PF08545.10 gi|452209456|ref|YP_007489570.1| - 0.55 10.1 5.7 0.44 10.4 1.0 2.5 3 0 0 3 3 3 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ACP_syn_III_C PF08541.10 gi|452209457|ref|YP_007489571.1| - 6.3e-11 42.3 0.0 1.3e-10 41.3 0.0 1.6 1 0 0 1 1 1 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HMG_CoA_synt_C PF08540.10 gi|452209457|ref|YP_007489571.1| - 3.8e-06 26.7 0.0 0.00024 20.9 0.0 2.3 1 1 1 2 2 2 2 Hydroxymethylglutaryl-coenzyme A synthase C terminal Thiolase_N PF00108.23 gi|452209457|ref|YP_007489571.1| - 0.00016 21.1 0.6 0.00039 19.9 0.6 1.5 2 0 0 2 2 2 1 Thiolase, N-terminal domain HMG_CoA_synt_N PF01154.17 gi|452209457|ref|YP_007489571.1| - 0.00096 19.1 0.2 0.0013 18.6 0.2 1.2 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase N terminal ACP_syn_III PF08545.10 gi|452209457|ref|YP_007489571.1| - 1.6 8.6 6.2 0.91 9.4 2.5 2.3 2 0 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HTH_3 PF01381.22 gi|452209458|ref|YP_007489572.1| - 4.3e-08 33.1 0.0 1.9e-07 31.0 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix HTH_19 PF12844.7 gi|452209458|ref|YP_007489572.1| - 8.9e-07 28.8 0.0 2.7e-06 27.3 0.0 1.9 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|452209458|ref|YP_007489572.1| - 0.0011 19.2 0.0 0.0042 17.4 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|452209458|ref|YP_007489572.1| - 0.095 12.7 0.0 0.19 11.7 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_38 PF13936.6 gi|452209458|ref|YP_007489572.1| - 0.11 12.3 0.0 0.35 10.7 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain Cas_Cas4 PF01930.17 gi|452209459|ref|YP_007489573.1| - 0.00028 21.0 0.0 0.065 13.3 0.0 2.2 2 0 0 2 2 2 2 Domain of unknown function DUF83 Cas_Cas4 PF01930.17 gi|452209461|ref|YP_007489575.1| - 7.2e-06 26.2 1.5 7.9e-06 26.1 1.5 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF83 GUN4_N PF16416.5 gi|452209463|ref|YP_007489577.1| - 0.0025 17.8 0.6 1.6 8.8 0.1 2.5 2 0 0 2 2 2 2 ARM-like repeat domain, GUN4-N terminal DUF883 PF05957.13 gi|452209463|ref|YP_007489577.1| - 0.016 15.8 4.7 2.2 8.9 0.4 2.7 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF883) Receptor_IA-2 PF11548.8 gi|452209463|ref|YP_007489577.1| - 0.082 12.9 0.1 7.8 6.6 0.0 2.7 2 0 0 2 2 2 0 Protein-tyrosine phosphatase receptor IA-2 Cyclin_C_2 PF16899.5 gi|452209463|ref|YP_007489577.1| - 0.64 10.4 3.0 8.3 6.9 1.7 2.6 1 1 1 2 2 2 0 Cyclin C-terminal domain DUF1018 PF06252.12 gi|452209463|ref|YP_007489577.1| - 1 10.4 5.6 0.33 11.9 0.4 2.6 2 2 1 3 3 3 0 Protein of unknown function (DUF1018) Scm3 PF10384.9 gi|452209463|ref|YP_007489577.1| - 1.1 9.1 6.1 3.3 7.5 1.3 2.6 2 0 0 2 2 2 0 Centromere protein Scm3 AAA_15 PF13175.6 gi|452209463|ref|YP_007489577.1| - 1.6 8.4 14.0 0.17 11.6 4.9 2.0 1 1 0 2 2 2 0 AAA ATPase domain PAPS_reduct PF01507.19 gi|452209464|ref|YP_007489578.1| - 4.5e-40 137.5 0.0 7.6e-40 136.8 0.0 1.4 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family PUA PF01472.20 gi|452209464|ref|YP_007489578.1| - 3.4e-18 65.4 0.1 8e-18 64.2 0.1 1.6 1 0 0 1 1 1 1 PUA domain Fer4 PF00037.27 gi|452209464|ref|YP_007489578.1| - 1.4e-08 34.2 15.3 6.4e-05 22.6 2.9 3.0 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|452209464|ref|YP_007489578.1| - 4.3e-07 29.7 11.7 0.00029 20.8 2.2 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|452209464|ref|YP_007489578.1| - 1.1e-06 29.1 11.0 6e-06 26.8 11.0 2.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|452209464|ref|YP_007489578.1| - 3.4e-05 23.9 9.9 3.4e-05 23.9 9.9 2.0 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452209464|ref|YP_007489578.1| - 3.4e-05 23.9 22.5 5.3e-05 23.3 12.8 2.6 3 1 1 4 4 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|452209464|ref|YP_007489578.1| - 6.3e-05 23.0 11.3 0.00022 21.2 11.3 2.0 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452209464|ref|YP_007489578.1| - 0.00062 19.7 1.8 0.00062 19.7 1.8 3.4 4 0 0 4 4 2 1 4Fe-4S binding domain Fer4_16 PF13484.6 gi|452209464|ref|YP_007489578.1| - 0.0012 19.7 13.2 0.19 12.7 3.4 3.3 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|452209464|ref|YP_007489578.1| - 0.01 16.3 3.0 0.01 16.3 3.0 3.1 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|452209464|ref|YP_007489578.1| - 0.013 16.3 5.3 0.013 16.3 5.3 3.6 4 0 0 4 4 2 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|452209464|ref|YP_007489578.1| - 0.02 15.4 11.4 1.2 9.7 3.2 2.9 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|452209464|ref|YP_007489578.1| - 0.04 14.8 8.0 0.63 10.9 1.1 2.8 2 0 0 2 2 2 0 4Fe-4S dicluster domain S19 PF06756.11 gi|452209464|ref|YP_007489578.1| - 0.043 13.8 0.0 0.11 12.5 0.0 1.6 1 0 0 1 1 1 0 Chorion protein S19 C-terminal UPF0113 PF03657.13 gi|452209464|ref|YP_007489578.1| - 0.12 12.7 0.0 0.27 11.5 0.0 1.5 1 0 0 1 1 1 0 UPF0113 PUA domain Fer4_18 PF13746.6 gi|452209464|ref|YP_007489578.1| - 0.78 10.0 8.9 5.4 7.3 8.9 2.2 1 1 0 1 1 1 0 4Fe-4S dicluster domain Ezh2_MCSS PF18600.1 gi|452209464|ref|YP_007489578.1| - 1.5 8.5 7.5 3.5 7.3 4.2 2.4 2 0 0 2 2 2 0 MCSS domain Fer4_8 PF13183.6 gi|452209464|ref|YP_007489578.1| - 3.3 8.2 19.1 51 4.4 2.7 3.3 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|452209464|ref|YP_007489578.1| - 3.7 8.3 10.0 17 6.2 1.7 3.1 2 0 0 2 2 2 0 4Fe-4S single cluster domain Inhibitor_I42 PF09394.10 gi|452209465|ref|YP_007489579.1| - 6e-14 52.2 0.0 6.7e-14 52.1 0.0 1.0 1 0 0 1 1 1 1 Chagasin family peptidase inhibitor I42 IMS PF00817.20 gi|452209466|ref|YP_007489580.1| - 4.3e-38 130.6 0.0 7.6e-38 129.8 0.0 1.4 1 0 0 1 1 1 1 impB/mucB/samB family IMS_HHH PF11798.8 gi|452209466|ref|YP_007489580.1| - 2.2e-11 43.4 0.1 7.6e-11 41.7 0.1 2.0 1 0 0 1 1 1 1 IMS family HHH motif IMS_C PF11799.8 gi|452209466|ref|YP_007489580.1| - 6.2e-11 43.0 0.3 1.9e-10 41.5 0.2 1.8 2 1 0 2 2 2 1 impB/mucB/samB family C-terminal domain DNA_pol_lambd_f PF10391.9 gi|452209466|ref|YP_007489580.1| - 0.00053 19.8 0.0 0.0012 18.6 0.0 1.5 1 0 0 1 1 1 1 Fingers domain of DNA polymerase lambda HHH_5 PF14520.6 gi|452209466|ref|YP_007489580.1| - 0.0051 17.4 0.9 0.015 15.8 0.1 2.2 2 0 0 2 2 2 1 Helix-hairpin-helix domain Cdd1 PF11731.8 gi|452209466|ref|YP_007489580.1| - 0.011 15.9 0.0 0.026 14.8 0.0 1.5 1 0 0 1 1 1 0 Pathogenicity locus DUF1805 PF08827.11 gi|452209466|ref|YP_007489580.1| - 0.15 12.4 0.0 8.2 6.8 0.0 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF1805) ABC_tran PF00005.27 gi|452209467|ref|YP_007489581.1| - 3.3e-32 111.9 0.0 4.8e-32 111.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|452209467|ref|YP_007489581.1| - 9.4e-16 58.5 1.5 4e-11 43.3 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|452209467|ref|YP_007489581.1| - 8.1e-09 35.2 0.0 2e-08 34.0 0.0 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|452209467|ref|YP_007489581.1| - 0.013 15.3 0.0 0.024 14.4 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 gi|452209467|ref|YP_007489581.1| - 0.028 14.5 0.1 0.085 12.9 0.0 1.9 2 0 0 2 2 2 0 50S ribosome-binding GTPase BCA_ABC_TP_C PF12399.8 gi|452209467|ref|YP_007489581.1| - 0.034 14.1 0.0 0.09 12.7 0.0 1.8 1 0 0 1 1 1 0 Branched-chain amino acid ATP-binding cassette transporter SbcCD_C PF13558.6 gi|452209467|ref|YP_007489581.1| - 0.047 13.9 0.0 0.73 10.1 0.0 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit RsgA_GTPase PF03193.16 gi|452209467|ref|YP_007489581.1| - 0.061 13.2 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_28 PF13521.6 gi|452209467|ref|YP_007489581.1| - 0.079 13.2 0.0 0.17 12.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|452209467|ref|YP_007489581.1| - 0.084 12.3 0.1 0.18 11.2 0.1 1.5 1 1 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_23 PF13476.6 gi|452209467|ref|YP_007489581.1| - 0.1 13.1 0.1 0.19 12.2 0.1 1.4 1 0 0 1 1 1 0 AAA domain CbiQ PF02361.16 gi|452209468|ref|YP_007489582.1| - 3.1e-36 125.1 6.9 3.8e-36 124.7 6.9 1.1 1 0 0 1 1 1 1 Cobalt transport protein PAS_3 PF08447.12 gi|452209469|ref|YP_007489583.1| - 7.1e-43 144.8 0.4 1.1e-21 76.9 0.0 2.8 2 0 0 2 2 2 2 PAS fold HisKA_2 PF07568.12 gi|452209469|ref|YP_007489583.1| - 6.9e-30 103.0 1.5 6.9e-30 103.0 1.5 2.2 2 0 0 2 2 2 1 Histidine kinase HATPase_c PF02518.26 gi|452209469|ref|YP_007489583.1| - 5.5e-10 39.8 3.0 2.7e-09 37.5 1.3 2.7 2 1 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS PF00989.25 gi|452209469|ref|YP_007489583.1| - 2.1e-09 37.3 0.2 0.00034 20.6 0.0 3.0 3 0 0 3 3 3 2 PAS fold PAS_9 PF13426.7 gi|452209469|ref|YP_007489583.1| - 7.4e-08 32.6 0.4 0.03 14.6 0.0 3.2 3 0 0 3 3 3 2 PAS domain HATPase_c_2 PF13581.6 gi|452209469|ref|YP_007489583.1| - 2.6e-07 30.6 0.0 5.8e-07 29.5 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_4 PF08448.10 gi|452209469|ref|YP_007489583.1| - 0.00024 21.3 0.0 0.019 15.2 0.0 2.5 2 0 0 2 2 2 1 PAS fold HWE_HK PF07536.14 gi|452209469|ref|YP_007489583.1| - 0.00054 20.6 2.1 0.00069 20.3 0.5 2.1 2 0 0 2 2 2 1 HWE histidine kinase HATPase_c_3 PF13589.6 gi|452209469|ref|YP_007489583.1| - 0.0078 16.1 0.1 0.019 14.8 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_11 PF14598.6 gi|452209469|ref|YP_007489583.1| - 0.081 13.1 0.0 0.55 10.4 0.0 2.4 2 0 0 2 2 2 0 PAS domain AROS PF15684.5 gi|452209469|ref|YP_007489583.1| - 4.5 7.9 7.1 0.51 10.9 0.5 2.4 3 0 0 3 3 3 0 Active regulator of SIRT1, or 40S ribosomal protein S19-binding 1 NAS PF03059.16 gi|452209470|ref|YP_007489584.1| - 1.1e-10 41.3 0.0 1.3e-10 41.1 0.0 1.0 1 0 0 1 1 1 1 Nicotianamine synthase protein DUF2113 PF09886.9 gi|452209470|ref|YP_007489584.1| - 0.022 14.1 0.0 0.032 13.6 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2113) NAGLU_N PF12971.7 gi|452209470|ref|YP_007489584.1| - 0.034 13.9 0.0 0.048 13.4 0.0 1.3 1 0 0 1 1 1 0 Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain CbiM PF01891.16 gi|452209472|ref|YP_007489586.1| - 4.9e-55 186.6 22.7 5.5e-55 186.4 22.7 1.0 1 0 0 1 1 1 1 Cobalt uptake substrate-specific transmembrane region EbsA PF17255.2 gi|452209472|ref|YP_007489586.1| - 0.032 14.6 1.3 0.066 13.5 1.3 1.5 1 0 0 1 1 1 0 EbsA-like protein PDGLE PF13190.6 gi|452209473|ref|YP_007489587.1| - 2e-16 59.7 0.7 2.4e-16 59.4 0.7 1.1 1 0 0 1 1 1 1 PDGLE domain DUF4999 PF16390.5 gi|452209473|ref|YP_007489587.1| - 0.17 12.1 0.0 0.28 11.4 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function OppC_N PF12911.7 gi|452209473|ref|YP_007489587.1| - 0.27 11.2 0.0 0.27 11.2 0.0 1.6 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C HhH-GPD PF00730.25 gi|452209474|ref|YP_007489588.1| - 5.8e-22 78.2 0.0 7.8e-22 77.8 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|452209474|ref|YP_007489588.1| - 4.3e-09 35.8 0.0 1.2e-08 34.3 0.0 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix motif EndIII_4Fe-2S PF10576.9 gi|452209474|ref|YP_007489588.1| - 0.00012 22.3 3.8 0.00022 21.5 3.8 1.5 1 0 0 1 1 1 1 Iron-sulfur binding domain of endonuclease III DUF3349 PF11829.8 gi|452209474|ref|YP_007489588.1| - 0.011 16.5 0.1 0.088 13.6 0.0 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF3349) 5_3_exonuc PF01367.20 gi|452209474|ref|YP_007489588.1| - 0.035 14.7 0.0 0.11 13.1 0.0 1.8 2 0 0 2 2 2 0 5'-3' exonuclease, C-terminal SAM fold HHH_5 PF14520.6 gi|452209474|ref|YP_007489588.1| - 0.035 14.7 0.1 0.97 10.1 0.0 2.4 2 0 0 2 2 2 0 Helix-hairpin-helix domain Urocanase_N PF17391.2 gi|452209474|ref|YP_007489588.1| - 0.16 11.7 0.0 0.31 10.7 0.0 1.4 1 0 0 1 1 1 0 Urocanase N-terminal domain AICARFT_IMPCHas PF01808.18 gi|452209475|ref|YP_007489589.1| - 5e-100 334.8 0.0 6.4e-100 334.4 0.0 1.1 1 0 0 1 1 1 1 AICARFT/IMPCHase bienzyme MGS PF02142.22 gi|452209475|ref|YP_007489589.1| - 2.7e-26 91.6 0.1 4.9e-26 90.8 0.1 1.4 1 0 0 1 1 1 1 MGS-like domain MgsA_C PF12002.8 gi|452209475|ref|YP_007489589.1| - 0.0076 16.2 0.0 0.021 14.8 0.0 1.7 1 0 0 1 1 1 1 MgsA AAA+ ATPase C terminal DNA_topoisoIV PF00521.20 gi|452209475|ref|YP_007489589.1| - 0.18 10.7 0.0 0.27 10.1 0.0 1.2 1 0 0 1 1 1 0 DNA gyrase/topoisomerase IV, subunit A DUF1724 PF08350.10 gi|452209476|ref|YP_007489590.1| - 2.1e-22 79.0 0.5 5.1e-22 77.8 0.5 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|452209476|ref|YP_007489590.1| - 0.0019 18.0 0.0 0.0035 17.2 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family JIP_LZII PF16471.5 gi|452209476|ref|YP_007489590.1| - 0.016 15.4 0.2 0.81 9.9 0.1 2.3 2 0 0 2 2 2 0 JNK-interacting protein leucine zipper II HTH_24 PF13412.6 gi|452209476|ref|YP_007489590.1| - 0.2 11.2 0.8 2.6 7.7 0.0 2.6 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding UbiA PF01040.18 gi|452209477|ref|YP_007489591.1| - 2.2e-14 53.4 9.5 5.1e-14 52.2 9.5 1.6 1 1 0 1 1 1 1 UbiA prenyltransferase family E1-E2_ATPase PF00122.20 gi|452209479|ref|YP_007489593.1| - 1.5e-48 164.7 6.0 1.5e-48 164.7 6.0 2.4 4 0 0 4 4 4 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 gi|452209479|ref|YP_007489593.1| - 1.1e-42 145.8 9.6 3.3e-42 144.3 9.6 1.8 1 0 0 1 1 1 1 Cation transporting ATPase, C-terminus Cation_ATPase_N PF00690.26 gi|452209479|ref|YP_007489593.1| - 5.2e-19 67.7 0.1 1.6e-18 66.1 0.0 2.0 2 0 0 2 2 2 1 Cation transporter/ATPase, N-terminus Hydrolase PF00702.26 gi|452209479|ref|YP_007489593.1| - 8.3e-19 68.7 3.0 2.1e-17 64.2 3.0 2.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 gi|452209479|ref|YP_007489593.1| - 5.7e-18 64.8 0.0 1.3e-17 63.6 0.0 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Hydrolase_3 PF08282.12 gi|452209479|ref|YP_007489593.1| - 1.1e-06 28.6 0.2 0.00017 21.4 0.2 2.6 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Methyltransf_25 PF13649.6 gi|452209480|ref|YP_007489594.1| - 6.3e-11 42.8 0.0 1.2e-10 42.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|452209480|ref|YP_007489594.1| - 7.8e-09 35.0 0.0 1.1e-08 34.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase PCMT PF01135.19 gi|452209480|ref|YP_007489594.1| - 5.9e-07 29.4 0.0 9.4e-07 28.8 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_12 PF08242.12 gi|452209480|ref|YP_007489594.1| - 9.9e-07 29.4 0.0 2.1e-06 28.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|452209480|ref|YP_007489594.1| - 3.2e-06 27.1 0.0 5.2e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|452209480|ref|YP_007489594.1| - 7.5e-06 26.5 0.0 1.4e-05 25.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|452209480|ref|YP_007489594.1| - 1.4e-05 24.7 0.0 2.5e-05 23.9 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_31 PF13847.6 gi|452209480|ref|YP_007489594.1| - 1.6e-05 24.8 0.0 2.7e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain GidB PF02527.15 gi|452209480|ref|YP_007489594.1| - 0.00011 21.5 0.0 0.00028 20.2 0.0 1.6 2 0 0 2 2 2 1 rRNA small subunit methyltransferase G Methyltr_RsmB-F PF01189.17 gi|452209480|ref|YP_007489594.1| - 0.00016 21.4 0.0 0.00033 20.4 0.0 1.4 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F MTS PF05175.14 gi|452209480|ref|YP_007489594.1| - 0.00088 18.9 0.0 0.0019 17.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_16 PF10294.9 gi|452209480|ref|YP_007489594.1| - 0.0015 18.3 0.0 0.0023 17.7 0.0 1.3 1 0 0 1 1 1 1 Lysine methyltransferase DREV PF05219.12 gi|452209480|ref|YP_007489594.1| - 0.0017 17.5 0.0 0.0026 16.9 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase CMAS PF02353.20 gi|452209480|ref|YP_007489594.1| - 0.0017 17.7 0.0 0.0025 17.2 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Cons_hypoth95 PF03602.15 gi|452209480|ref|YP_007489594.1| - 0.0033 17.1 0.0 0.0053 16.4 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_18 PF12847.7 gi|452209480|ref|YP_007489594.1| - 0.0036 17.2 0.0 0.0098 15.8 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|452209480|ref|YP_007489594.1| - 0.0089 15.4 0.0 0.012 14.9 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_4 PF02390.17 gi|452209480|ref|YP_007489594.1| - 0.026 14.0 0.5 0.086 12.3 0.0 1.9 2 0 0 2 2 2 0 Putative methyltransferase PrmA PF06325.13 gi|452209480|ref|YP_007489594.1| - 0.035 13.5 0.0 0.082 12.3 0.0 1.6 1 1 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) DUF938 PF06080.12 gi|452209480|ref|YP_007489594.1| - 0.037 13.8 0.0 0.053 13.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF938) P21-Arc PF04062.14 gi|452209480|ref|YP_007489594.1| - 0.07 13.2 0.1 6.5 6.8 0.0 2.8 2 1 1 3 3 3 0 ARP2/3 complex ARPC3 (21 kDa) subunit Phage_Coat_A PF05357.13 gi|452209480|ref|YP_007489594.1| - 0.11 12.3 0.4 18 5.2 0.0 2.5 2 0 0 2 2 2 0 Phage Coat Protein A Met_10 PF02475.16 gi|452209480|ref|YP_007489594.1| - 0.17 11.7 0.0 0.32 10.7 0.0 1.4 1 1 0 1 1 1 0 Met-10+ like-protein Gpr1_Fun34_YaaH PF01184.19 gi|452209481|ref|YP_007489595.1| - 7.6e-42 143.3 17.9 9.3e-42 143.0 17.9 1.0 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family iPGM_N PF06415.13 gi|452209482|ref|YP_007489596.1| - 3.9e-86 288.0 0.0 5.4e-86 287.5 0.0 1.2 1 0 0 1 1 1 1 BPG-independent PGAM N-terminus (iPGM_N) Metalloenzyme PF01676.18 gi|452209482|ref|YP_007489596.1| - 3.7e-82 275.4 0.0 4.2e-82 275.2 0.0 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Phosphodiest PF01663.22 gi|452209482|ref|YP_007489596.1| - 4.6e-05 23.2 0.0 7.7e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase PglZ PF08665.12 gi|452209482|ref|YP_007489596.1| - 0.0024 18.0 0.1 0.0047 17.0 0.1 1.5 1 0 0 1 1 1 1 PglZ domain Sulfatase PF00884.23 gi|452209482|ref|YP_007489596.1| - 0.0028 17.1 0.0 0.0066 15.9 0.0 1.7 1 0 0 1 1 1 1 Sulfatase GHMP_kinases_N PF00288.26 gi|452209483|ref|YP_007489597.1| - 5.2e-06 26.6 0.5 1.1e-05 25.6 0.5 1.6 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|452209483|ref|YP_007489597.1| - 3.1e-05 24.3 0.0 7.1e-05 23.1 0.0 1.7 1 0 0 1 1 1 1 GHMP kinases C terminal XPG_I PF00867.18 gi|452209484|ref|YP_007489598.1| - 2.2e-28 98.4 0.2 1e-27 96.3 0.0 2.1 2 0 0 2 2 2 1 XPG I-region XPG_N PF00752.17 gi|452209484|ref|YP_007489598.1| - 3.1e-20 72.5 0.0 6.4e-20 71.5 0.0 1.5 1 0 0 1 1 1 1 XPG N-terminal domain 5_3_exonuc PF01367.20 gi|452209484|ref|YP_007489598.1| - 0.00013 22.5 1.1 0.00028 21.4 0.1 2.1 2 0 0 2 2 2 1 5'-3' exonuclease, C-terminal SAM fold HHH_5 PF14520.6 gi|452209484|ref|YP_007489598.1| - 0.019 15.6 0.0 0.056 14.0 0.0 1.8 1 0 0 1 1 1 0 Helix-hairpin-helix domain HHH_2 PF12826.7 gi|452209484|ref|YP_007489598.1| - 0.082 13.0 0.0 0.16 12.1 0.0 1.5 1 0 0 1 1 1 0 Helix-hairpin-helix motif DUF4919 PF16266.5 gi|452209487|ref|YP_007489601.1| - 0.017 15.1 0.2 0.019 14.9 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4919) MEDS PF14417.6 gi|452209487|ref|YP_007489601.1| - 0.033 14.0 0.0 0.036 13.9 0.0 1.1 1 0 0 1 1 1 0 MEDS: MEthanogen/methylotroph, DcmR Sensory domain MRFAP1 PF15155.6 gi|452209489|ref|YP_007489603.1| - 0.019 15.5 0.2 0.02 15.4 0.2 1.0 1 0 0 1 1 1 0 MORF4 family-associated protein1 DUF1664 PF07889.12 gi|452209489|ref|YP_007489603.1| - 0.033 14.2 0.3 0.035 14.1 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) MtrG PF04210.13 gi|452209489|ref|YP_007489603.1| - 0.044 13.6 2.5 0.56 10.1 0.2 2.0 1 1 1 2 2 2 0 Tetrahydromethanopterin S-methyltransferase, subunit G Baculo_PEP_C PF04513.12 gi|452209489|ref|YP_007489603.1| - 0.11 12.6 0.2 0.11 12.5 0.2 1.0 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus SPP PF06550.11 gi|452209490|ref|YP_007489604.1| - 5.9e-124 413.1 26.2 7e-124 412.9 26.2 1.0 1 0 0 1 1 1 1 Signal-peptide peptidase, presenilin aspartyl protease Peptidase_A22B PF04258.13 gi|452209490|ref|YP_007489604.1| - 1.1e-09 38.2 16.8 2e-09 37.4 16.8 1.4 1 1 0 1 1 1 1 Signal peptide peptidase Hydrolase PF00702.26 gi|452209491|ref|YP_007489605.1| - 2.4e-17 63.9 0.1 1.1e-16 61.7 0.1 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|452209491|ref|YP_007489605.1| - 3.2e-05 23.9 0.0 7.6e-05 22.7 0.0 1.6 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase_3 PF08282.12 gi|452209491|ref|YP_007489605.1| - 0.00024 20.9 0.6 0.12 12.1 0.0 2.9 2 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|452209491|ref|YP_007489605.1| - 0.022 14.8 0.0 0.041 14.0 0.0 1.6 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase ABC_tran PF00005.27 gi|452209492|ref|YP_007489606.1| - 5.3e-51 172.7 0.0 3.2e-25 89.2 0.0 2.6 2 0 0 2 2 2 2 ABC transporter SMC_N PF02463.19 gi|452209492|ref|YP_007489606.1| - 3.6e-05 23.3 1.2 0.74 9.2 0.0 3.3 2 1 0 3 3 3 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|452209492|ref|YP_007489606.1| - 6.1e-05 23.0 0.5 0.34 10.8 0.0 2.6 2 0 0 2 2 2 2 RsgA GTPase AAA_16 PF13191.6 gi|452209492|ref|YP_007489606.1| - 0.00075 19.9 0.0 0.11 12.9 0.0 2.5 2 0 0 2 2 2 1 AAA ATPase domain AAA_21 PF13304.6 gi|452209492|ref|YP_007489606.1| - 0.0013 18.6 3.4 3.3 7.4 0.0 3.8 3 1 1 4 4 4 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_30 PF13604.6 gi|452209492|ref|YP_007489606.1| - 0.0014 18.4 0.1 1.5 8.5 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_29 PF13555.6 gi|452209492|ref|YP_007489606.1| - 0.0017 18.0 1.0 0.87 9.4 0.1 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain PRK PF00485.18 gi|452209492|ref|YP_007489606.1| - 0.0037 17.0 0.1 2.9 7.6 0.0 2.3 2 0 0 2 2 2 2 Phosphoribulokinase / Uridine kinase family AAA_18 PF13238.6 gi|452209492|ref|YP_007489606.1| - 0.004 17.7 3.8 1.6 9.2 0.1 3.4 4 0 0 4 4 4 2 AAA domain AAA_33 PF13671.6 gi|452209492|ref|YP_007489606.1| - 0.0061 16.7 0.1 0.95 9.6 0.1 2.6 2 0 0 2 2 2 1 AAA domain MobB PF03205.14 gi|452209492|ref|YP_007489606.1| - 0.0086 16.0 0.5 2.7 7.9 0.1 2.5 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_23 PF13476.6 gi|452209492|ref|YP_007489606.1| - 0.02 15.4 2.1 2.1 8.8 0.2 2.5 2 0 0 2 2 2 0 AAA domain Mg_chelatase PF01078.21 gi|452209492|ref|YP_007489606.1| - 0.026 13.9 0.2 0.59 9.5 0.0 2.3 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI ATPase PF06745.13 gi|452209492|ref|YP_007489606.1| - 0.027 13.8 1.0 1.1 8.5 0.1 2.7 2 0 0 2 2 2 0 KaiC AAA_22 PF13401.6 gi|452209492|ref|YP_007489606.1| - 0.043 14.1 0.6 15 5.8 0.2 2.7 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 gi|452209492|ref|YP_007489606.1| - 0.06 12.5 3.7 1.2 8.2 0.2 2.8 3 0 0 3 3 3 0 NB-ARC domain DUF4796 PF16044.5 gi|452209492|ref|YP_007489606.1| - 0.067 12.8 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4796) SbcCD_C PF13558.6 gi|452209492|ref|YP_007489606.1| - 0.071 13.4 0.0 25 5.2 0.0 3.1 2 2 0 2 2 2 0 Putative exonuclease SbcCD, C subunit PhoH PF02562.16 gi|452209492|ref|YP_007489606.1| - 0.075 12.5 0.4 2 7.8 0.0 3.0 3 0 0 3 3 3 0 PhoH-like protein IstB_IS21 PF01695.17 gi|452209492|ref|YP_007489606.1| - 0.084 12.6 0.6 41 3.8 0.0 3.2 3 0 0 3 3 3 0 IstB-like ATP binding protein AAA PF00004.29 gi|452209492|ref|YP_007489606.1| - 0.15 12.5 0.8 29 5.1 0.1 3.3 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) zf-C3HC4_3 PF13920.6 gi|452209492|ref|YP_007489606.1| - 0.18 11.7 0.4 0.3 11.0 0.4 1.3 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) AAA_24 PF13479.6 gi|452209492|ref|YP_007489606.1| - 0.37 10.5 2.6 15 5.2 0.4 2.5 2 0 0 2 2 2 0 AAA domain DUF87 PF01935.17 gi|452209492|ref|YP_007489606.1| - 1.3 9.0 9.0 1.3 9.1 0.3 2.8 3 0 0 3 3 2 0 Helicase HerA, central domain NACHT PF05729.12 gi|452209492|ref|YP_007489606.1| - 2.4 8.0 5.5 1.1 9.1 0.4 2.4 2 0 0 2 2 2 0 NACHT domain Cut12 PF11500.8 gi|452209493|ref|YP_007489607.1| - 0.0052 16.8 0.1 0.013 15.5 0.1 1.6 1 0 0 1 1 1 1 Spindle pole body formation-associated protein DUF2102 PF09875.9 gi|452209494|ref|YP_007489608.1| - 8.1e-43 144.4 0.0 1.2e-42 143.8 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2102) DUF2112 PF09885.9 gi|452209495|ref|YP_007489609.1| - 3.6e-66 221.6 0.1 4.3e-66 221.4 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2112) Oxidored_nitro PF00148.19 gi|452209495|ref|YP_007489609.1| - 0.15 10.7 0.0 0.15 10.7 0.0 1.1 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase BcrAD_BadFG PF01869.20 gi|452209496|ref|YP_007489610.1| - 2.1e-56 191.4 4.1 2.8e-56 191.0 4.1 1.1 1 0 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family FtsA PF14450.6 gi|452209496|ref|YP_007489610.1| - 0.0038 17.6 0.7 0.054 13.9 0.7 2.4 1 1 0 1 1 1 1 Cell division protein FtsA Hydant_A_N PF05378.13 gi|452209496|ref|YP_007489610.1| - 0.007 16.1 0.6 0.021 14.6 0.6 1.8 1 0 0 1 1 1 1 Hydantoinase/oxoprolinase N-terminal region DUF2113 PF09886.9 gi|452209497|ref|YP_007489611.1| - 3.5e-67 225.4 0.8 3.9e-67 225.2 0.8 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2113) MCR_C PF04609.12 gi|452209498|ref|YP_007489612.1| - 2.4e-124 413.8 0.3 2.8e-124 413.6 0.3 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase operon protein C Peptidase_M10 PF00413.24 gi|452209499|ref|YP_007489613.1| - 2.3e-14 53.5 0.0 4.9e-14 52.5 0.0 1.5 1 1 0 1 1 1 1 Matrixin Reprolysin_3 PF13582.6 gi|452209499|ref|YP_007489613.1| - 0.0019 18.7 0.0 0.0027 18.2 0.0 1.2 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Peptidase_M66 PF10462.9 gi|452209499|ref|YP_007489613.1| - 0.002 17.1 0.1 0.0029 16.6 0.1 1.2 1 0 0 1 1 1 1 Peptidase M66 Peptidase_M57 PF12388.8 gi|452209499|ref|YP_007489613.1| - 0.024 14.2 0.0 0.031 13.9 0.0 1.3 1 0 0 1 1 1 0 Dual-action HEIGH metallo-peptidase Metallopep PF12044.8 gi|452209499|ref|YP_007489613.1| - 0.026 13.1 0.0 0.034 12.8 0.0 1.1 1 0 0 1 1 1 0 Putative peptidase family Astacin PF01400.24 gi|452209499|ref|YP_007489613.1| - 0.12 12.0 0.1 0.29 10.7 0.0 1.6 2 0 0 2 2 2 0 Astacin (Peptidase family M12A) KASH PF10541.9 gi|452209499|ref|YP_007489613.1| - 0.12 12.6 0.8 8.1 6.8 0.0 2.2 2 0 0 2 2 2 0 Nuclear envelope localisation domain Peptidase_M54 PF07998.11 gi|452209499|ref|YP_007489613.1| - 0.13 12.2 0.0 0.21 11.5 0.0 1.3 1 0 0 1 1 1 0 Peptidase family M54 Reprolysin_5 PF13688.6 gi|452209499|ref|YP_007489613.1| - 0.22 11.7 0.0 0.25 11.5 0.0 1.2 1 0 0 1 1 1 0 Metallo-peptidase family M12 NUDIX PF00293.28 gi|452209500|ref|YP_007489614.1| - 1.2e-20 73.9 0.0 1.4e-20 73.6 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 gi|452209500|ref|YP_007489614.1| - 1.9e-07 31.0 0.0 2.2e-07 30.8 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain AFOR_C PF01314.18 gi|452209501|ref|YP_007489615.1| - 9.4e-91 304.7 0.0 2.2e-90 303.5 0.0 1.6 1 1 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AFOR_N PF02730.15 gi|452209501|ref|YP_007489615.1| - 4.9e-63 212.6 2.2 7e-63 212.1 2.2 1.2 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain eIF-5a PF01287.20 gi|452209502|ref|YP_007489616.1| - 4.5e-07 29.9 0.3 4.5e-07 29.9 0.3 1.6 2 0 0 2 2 2 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold EFP_N PF08207.12 gi|452209502|ref|YP_007489616.1| - 7.4e-05 22.7 0.1 0.00015 21.7 0.1 1.6 1 0 0 1 1 1 1 Elongation factor P (EF-P) KOW-like domain Arginase PF00491.21 gi|452209503|ref|YP_007489617.1| - 6e-78 262.2 0.0 6.8e-78 262.0 0.0 1.0 1 0 0 1 1 1 1 Arginase family DUF150_C PF17384.2 gi|452209505|ref|YP_007489619.1| - 0.048 13.8 0.0 0.053 13.6 0.0 1.1 1 0 0 1 1 1 0 RimP C-terminal SH3 domain DDE_Tnp_1 PF01609.21 gi|452209507|ref|YP_007489621.1| - 0.00031 20.5 0.0 0.00035 20.3 0.0 1.1 1 0 0 1 1 1 1 Transposase DDE domain HTH_3 PF01381.22 gi|452209508|ref|YP_007489622.1| - 5.3e-15 55.2 0.0 5.9e-15 55.1 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|452209508|ref|YP_007489622.1| - 2.4e-09 37.0 0.1 2.7e-09 36.9 0.1 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|452209508|ref|YP_007489622.1| - 3.8e-09 36.7 0.0 4.4e-09 36.6 0.0 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|452209508|ref|YP_007489622.1| - 4.3e-06 27.1 0.0 4.7e-06 26.9 0.0 1.0 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain Sigma70_r4 PF04545.16 gi|452209508|ref|YP_007489622.1| - 0.00027 20.4 0.0 0.0004 19.8 0.0 1.2 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_Crp_2 PF13545.6 gi|452209508|ref|YP_007489622.1| - 0.0017 18.3 0.0 0.0028 17.6 0.0 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_11 PF08279.12 gi|452209508|ref|YP_007489622.1| - 0.0038 17.1 0.0 0.0061 16.5 0.0 1.4 1 0 0 1 1 1 1 HTH domain HTH_25 PF13413.6 gi|452209508|ref|YP_007489622.1| - 0.0062 16.4 0.0 0.0081 16.0 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|452209508|ref|YP_007489622.1| - 0.034 13.7 0.0 0.054 13.1 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding YdaS_antitoxin PF15943.5 gi|452209508|ref|YP_007489622.1| - 0.059 13.2 0.0 0.071 13.0 0.0 1.2 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT MarR_2 PF12802.7 gi|452209508|ref|YP_007489622.1| - 0.067 13.1 0.0 0.093 12.6 0.0 1.2 1 0 0 1 1 1 0 MarR family HTH_CodY PF08222.11 gi|452209508|ref|YP_007489622.1| - 0.13 11.8 0.0 0.2 11.2 0.0 1.3 1 0 0 1 1 1 0 CodY helix-turn-helix domain DUF2178 PF09946.9 gi|452209509|ref|YP_007489623.1| - 9.7e-30 102.9 3.7 1.1e-29 102.7 3.7 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2178) RseC_MucC PF04246.12 gi|452209509|ref|YP_007489623.1| - 0.046 13.7 0.6 0.046 13.7 0.6 1.9 2 1 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC RII_binding_1 PF10522.9 gi|452209509|ref|YP_007489623.1| - 0.58 10.5 2.2 16 6.0 0.3 2.4 2 0 0 2 2 2 0 RII binding domain UbiA PF01040.18 gi|452209509|ref|YP_007489623.1| - 4 6.6 14.1 31 3.8 5.9 2.0 1 1 0 1 1 1 0 UbiA prenyltransferase family DUF2244 PF10003.9 gi|452209509|ref|YP_007489623.1| - 4.1 7.1 10.7 1.1 8.9 2.0 2.6 1 1 1 2 2 2 0 Integral membrane protein (DUF2244) Na_H_Exchanger PF00999.21 gi|452209510|ref|YP_007489624.1| - 6.2e-64 216.2 54.1 9.1e-64 215.6 54.1 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.18 gi|452209510|ref|YP_007489624.1| - 3.3e-20 72.5 0.1 6.4e-20 71.6 0.1 1.5 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.21 gi|452209510|ref|YP_007489624.1| - 3.2e-12 46.1 0.0 8.6e-12 44.7 0.0 1.8 1 0 0 1 1 1 1 TrkA-C domain P-II PF00543.22 gi|452209511|ref|YP_007489625.1| - 0.0004 21.0 0.4 0.00053 20.6 0.4 1.1 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II DUF1538 PF07556.11 gi|452209512|ref|YP_007489626.1| - 1.9e-63 213.6 20.4 2.3e-63 213.3 20.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1538) TB2_DP1_HVA22 PF03134.19 gi|452209512|ref|YP_007489626.1| - 2.2 8.3 7.3 2.5 8.1 0.6 2.4 2 0 0 2 2 2 0 TB2/DP1, HVA22 family Na_H_Exchanger PF00999.21 gi|452209513|ref|YP_007489627.1| - 1.5e-48 165.6 50.7 2e-48 165.1 50.7 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.18 gi|452209513|ref|YP_007489627.1| - 8.7e-24 84.0 0.9 1.4e-23 83.3 0.9 1.4 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.21 gi|452209513|ref|YP_007489627.1| - 1.6e-06 27.8 0.8 4e-06 26.6 0.2 2.0 2 0 0 2 2 2 1 TrkA-C domain AlaDh_PNT_C PF01262.21 gi|452209513|ref|YP_007489627.1| - 0.0076 15.6 0.4 0.031 13.6 0.6 1.8 1 1 1 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain 3HCDH_N PF02737.18 gi|452209513|ref|YP_007489627.1| - 0.035 14.0 0.3 0.056 13.3 0.3 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DUF4147 PF13660.6 gi|452209513|ref|YP_007489627.1| - 0.046 13.3 0.1 0.087 12.4 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4147) LAM_C PF12544.8 gi|452209515|ref|YP_007489629.1| - 4.4e-35 120.6 0.0 7.4e-35 119.9 0.0 1.4 1 0 0 1 1 1 1 Lysine-2,3-aminomutase Radical_SAM PF04055.21 gi|452209515|ref|YP_007489629.1| - 1.1e-07 32.4 0.7 6.4e-07 29.9 0.1 2.3 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|452209515|ref|YP_007489629.1| - 5.2e-05 23.4 1.9 0.017 15.3 0.0 3.0 3 1 1 4 4 4 2 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|452209515|ref|YP_007489629.1| - 0.00022 21.5 0.9 0.001 19.4 0.0 2.3 3 0 0 3 3 3 1 4Fe-4S single cluster domain DUF5561 PF17716.1 gi|452209515|ref|YP_007489629.1| - 0.063 12.6 0.0 0.12 11.7 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5561) T2SSF PF00482.23 gi|452209517|ref|YP_007489631.1| - 2.3e-36 124.5 6.3 6.3e-20 71.4 0.0 3.0 3 0 0 3 3 3 2 Type II secretion system (T2SS), protein F Orf78 PF06024.12 gi|452209517|ref|YP_007489631.1| - 0.036 14.3 2.8 0.068 13.5 0.1 2.6 2 0 0 2 2 2 0 Orf78 (ac78) TRAP-gamma PF07074.12 gi|452209517|ref|YP_007489631.1| - 0.49 9.9 4.0 0.46 10.0 0.2 2.7 3 0 0 3 3 3 0 Translocon-associated protein, gamma subunit (TRAP-gamma) DUF1129 PF06570.11 gi|452209517|ref|YP_007489631.1| - 0.95 8.9 5.4 3 7.3 0.1 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF1129) Baculo_11_kDa PF06143.11 gi|452209517|ref|YP_007489631.1| - 7.4 6.2 7.9 11 5.7 0.5 3.5 3 0 0 3 3 3 0 Baculovirus 11 kDa family Sigma_reg_N PF13800.6 gi|452209517|ref|YP_007489631.1| - 9.3 6.6 9.4 0.34 11.2 0.2 3.2 3 0 0 3 3 3 0 Sigma factor regulator N-terminal T2SSE PF00437.20 gi|452209518|ref|YP_007489632.1| - 1.4e-42 145.7 0.0 2.1e-42 145.0 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_23 PF13476.6 gi|452209518|ref|YP_007489632.1| - 0.076 13.5 0.9 0.32 11.5 0.0 2.1 2 0 0 2 2 2 0 AAA domain PP2C_C PF07830.13 gi|452209518|ref|YP_007489632.1| - 0.12 12.9 0.3 0.42 11.1 0.1 2.1 2 0 0 2 2 2 0 Protein serine/threonine phosphatase 2C, C-terminal domain AAA_29 PF13555.6 gi|452209518|ref|YP_007489632.1| - 0.14 11.9 0.0 0.29 10.9 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain ATPase PF06745.13 gi|452209520|ref|YP_007489634.1| - 1.3e-46 158.8 0.0 1.5e-46 158.7 0.0 1.0 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.6 gi|452209520|ref|YP_007489634.1| - 1.6e-05 24.6 0.2 6e-05 22.7 0.0 1.8 2 0 0 2 2 2 1 AAA domain RecA PF00154.21 gi|452209520|ref|YP_007489634.1| - 2.8e-05 23.7 0.2 5.5e-05 22.8 0.0 1.5 2 0 0 2 2 2 1 recA bacterial DNA recombination protein NTPase_1 PF03266.15 gi|452209520|ref|YP_007489634.1| - 3.4e-05 23.8 0.4 0.00012 22.1 0.4 1.7 1 1 0 1 1 1 1 NTPase GvpD PF07088.11 gi|452209520|ref|YP_007489634.1| - 3.4e-05 22.7 0.0 0.0007 18.3 0.0 2.1 2 0 0 2 2 2 1 GvpD gas vesicle protein IstB_IS21 PF01695.17 gi|452209520|ref|YP_007489634.1| - 0.00093 19.0 0.2 0.0033 17.2 0.0 1.8 2 0 0 2 2 2 1 IstB-like ATP binding protein DnaB_C PF03796.15 gi|452209520|ref|YP_007489634.1| - 0.0012 18.2 0.0 0.0015 17.9 0.0 1.3 1 1 0 1 1 1 1 DnaB-like helicase C terminal domain PAXNEB PF05625.11 gi|452209520|ref|YP_007489634.1| - 0.002 17.3 0.0 0.0031 16.7 0.0 1.2 1 0 0 1 1 1 1 PAXNEB protein MORN_2 PF07661.13 gi|452209520|ref|YP_007489634.1| - 0.004 17.2 0.1 0.0095 16.0 0.1 1.6 1 0 0 1 1 1 1 MORN repeat variant AAA_24 PF13479.6 gi|452209520|ref|YP_007489634.1| - 0.0043 16.8 0.7 0.02 14.6 0.7 2.0 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|452209520|ref|YP_007489634.1| - 0.0055 17.1 0.0 0.0061 17.0 0.0 1.3 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|452209520|ref|YP_007489634.1| - 0.0058 16.9 0.4 0.015 15.6 0.4 1.8 1 1 0 1 1 1 1 AAA domain T2SSE PF00437.20 gi|452209520|ref|YP_007489634.1| - 0.0089 15.1 0.0 0.014 14.5 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein Sigma54_activat PF00158.26 gi|452209520|ref|YP_007489634.1| - 0.015 15.0 0.0 0.024 14.4 0.0 1.2 1 0 0 1 1 1 0 Sigma-54 interaction domain TsaE PF02367.17 gi|452209520|ref|YP_007489634.1| - 0.017 15.2 0.3 0.035 14.1 0.2 1.5 2 0 0 2 2 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE SRP54 PF00448.22 gi|452209520|ref|YP_007489634.1| - 0.021 14.5 0.4 0.06 13.0 0.2 1.7 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain Rad51 PF08423.11 gi|452209520|ref|YP_007489634.1| - 0.027 13.7 0.1 0.044 13.0 0.1 1.4 1 0 0 1 1 1 0 Rad51 TIP49 PF06068.13 gi|452209520|ref|YP_007489634.1| - 0.031 13.5 0.0 0.043 13.0 0.0 1.2 1 0 0 1 1 1 0 TIP49 P-loop domain AAA_19 PF13245.6 gi|452209520|ref|YP_007489634.1| - 0.032 14.6 0.1 0.063 13.6 0.1 1.4 1 0 0 1 1 1 0 AAA domain DUF2075 PF09848.9 gi|452209520|ref|YP_007489634.1| - 0.036 13.3 0.0 0.042 13.1 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) ResIII PF04851.15 gi|452209520|ref|YP_007489634.1| - 0.042 13.9 0.0 0.055 13.5 0.0 1.2 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_29 PF13555.6 gi|452209520|ref|YP_007489634.1| - 0.043 13.6 0.1 0.11 12.3 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|452209520|ref|YP_007489634.1| - 0.06 13.8 0.3 0.16 12.4 0.2 1.6 2 0 0 2 2 2 0 AAA domain DEAD PF00270.29 gi|452209520|ref|YP_007489634.1| - 0.066 13.0 0.0 0.091 12.5 0.0 1.3 1 0 0 1 1 1 0 DEAD/DEAH box helicase TBSV_P22 PF03558.13 gi|452209520|ref|YP_007489634.1| - 0.12 11.8 0.0 0.19 11.2 0.0 1.3 1 0 0 1 1 1 0 TBSV core protein P21/P22 AAA_14 PF13173.6 gi|452209520|ref|YP_007489634.1| - 0.14 12.2 0.1 0.52 10.3 0.1 2.2 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 gi|452209520|ref|YP_007489634.1| - 0.14 11.6 0.1 0.24 10.9 0.1 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region TrwB_AAD_bind PF10412.9 gi|452209520|ref|YP_007489634.1| - 0.17 10.8 0.1 0.29 10.0 0.1 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain NACHT PF05729.12 gi|452209520|ref|YP_007489634.1| - 0.18 11.7 0.1 0.27 11.1 0.1 1.3 1 0 0 1 1 1 0 NACHT domain CbiA PF01656.23 gi|452209520|ref|YP_007489634.1| - 0.22 11.6 0.4 0.6 10.2 0.4 1.7 1 1 1 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_30 PF13604.6 gi|452209520|ref|YP_007489634.1| - 0.24 11.1 0.1 0.38 10.4 0.1 1.5 1 1 0 1 1 1 0 AAA domain RACo_C_ter PF14574.6 gi|452209522|ref|YP_007489636.1| - 1.1e-73 247.5 0.8 1.3e-72 244.0 1.5 2.1 2 0 0 2 2 2 1 C-terminal domain of RACo the ASKHA domain Raco_middle PF17651.1 gi|452209522|ref|YP_007489636.1| - 6.3e-10 39.0 0.1 1.8e-09 37.5 0.0 1.8 2 0 0 2 2 2 1 RACo middle region Fer4_9 PF13187.6 gi|452209522|ref|YP_007489636.1| - 1.8e-05 24.8 11.2 3.3e-05 24.0 11.2 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|452209522|ref|YP_007489636.1| - 3.5e-05 24.3 11.6 7.5e-05 23.2 11.6 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452209522|ref|YP_007489636.1| - 0.00012 22.9 12.2 0.002 19.0 3.6 2.7 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|452209522|ref|YP_007489636.1| - 0.00014 21.9 11.4 0.00028 20.9 11.4 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|452209522|ref|YP_007489636.1| - 0.00086 19.0 3.2 0.00086 19.0 3.2 2.6 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_6 PF12837.7 gi|452209522|ref|YP_007489636.1| - 0.0034 17.4 13.8 0.046 13.8 4.0 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_11 PF13247.6 gi|452209522|ref|YP_007489636.1| - 0.0036 17.4 5.7 0.0068 16.5 5.7 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|452209522|ref|YP_007489636.1| - 0.004 17.2 14.6 0.017 15.2 14.6 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452209522|ref|YP_007489636.1| - 0.0044 17.0 12.8 0.12 12.5 3.0 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|452209522|ref|YP_007489636.1| - 0.045 14.2 3.9 0.23 11.9 0.1 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|452209522|ref|YP_007489636.1| - 0.099 13.2 11.0 0.64 10.7 1.2 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_3 PF12798.7 gi|452209522|ref|YP_007489636.1| - 0.63 11.1 16.1 4.8 8.4 3.9 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|452209522|ref|YP_007489636.1| - 3.9 7.7 11.6 19 5.5 11.6 2.0 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|452209522|ref|YP_007489636.1| - 4.2 8.0 13.8 0.5 11.0 2.5 2.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain Lyase_1 PF00206.20 gi|452209525|ref|YP_007489639.1| - 9.5e-55 186.2 1.0 1.3e-54 185.7 1.0 1.1 1 0 0 1 1 1 1 Lyase ADSL_C PF10397.9 gi|452209525|ref|YP_007489639.1| - 1.4e-19 70.4 0.2 4.8e-19 68.7 0.0 2.0 2 0 0 2 2 2 1 Adenylosuccinate lyase C-terminus Ribosomal_L40e PF01020.17 gi|452209526|ref|YP_007489640.1| - 1.1e-06 28.4 6.9 1.2e-06 28.2 6.9 1.1 1 0 0 1 1 1 1 Ribosomal L40e family zinc_ribbon_2 PF13240.6 gi|452209526|ref|YP_007489640.1| - 0.00077 19.1 1.4 0.0011 18.6 1.4 1.2 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|452209526|ref|YP_007489640.1| - 0.0015 18.5 0.9 0.0016 18.4 0.9 1.2 1 0 0 1 1 1 1 Double zinc ribbon zf-RanBP PF00641.18 gi|452209526|ref|YP_007489640.1| - 0.0053 16.0 4.4 0.0074 15.6 4.4 1.2 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others zf-ribbon_3 PF13248.6 gi|452209526|ref|YP_007489640.1| - 0.016 14.6 2.5 0.02 14.3 2.5 1.2 1 0 0 1 1 1 0 zinc-ribbon domain HypA PF01155.19 gi|452209526|ref|YP_007489640.1| - 0.026 14.5 2.0 0.028 14.4 2.0 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DNA_RNApol_7kD PF03604.13 gi|452209526|ref|YP_007489640.1| - 0.061 13.0 6.7 0.11 12.1 6.7 1.5 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit Zn-ribbon_8 PF09723.10 gi|452209526|ref|YP_007489640.1| - 0.22 11.7 3.7 13 5.9 0.2 2.1 1 1 1 2 2 2 0 Zinc ribbon domain PcrB PF01884.17 gi|452209527|ref|YP_007489641.1| - 4.2e-66 222.6 1.2 4.8e-66 222.4 1.2 1.0 1 0 0 1 1 1 1 PcrB family His_biosynth PF00977.21 gi|452209527|ref|YP_007489641.1| - 3e-06 26.8 0.2 5.5e-06 26.0 0.2 1.4 1 0 0 1 1 1 1 Histidine biosynthesis protein NanE PF04131.14 gi|452209527|ref|YP_007489641.1| - 0.037 13.2 1.4 0.19 10.9 0.3 2.1 2 0 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase ThiG PF05690.14 gi|452209527|ref|YP_007489641.1| - 0.055 12.8 4.1 1.3 8.3 1.5 2.1 2 0 0 2 2 2 0 Thiazole biosynthesis protein ThiG CsgG PF03783.14 gi|452209527|ref|YP_007489641.1| - 0.071 12.4 0.1 0.12 11.6 0.1 1.3 1 0 0 1 1 1 0 Curli production assembly/transport component CsgG Ribul_P_3_epim PF00834.19 gi|452209527|ref|YP_007489641.1| - 0.096 12.1 0.3 0.19 11.1 0.3 1.5 1 0 0 1 1 1 0 Ribulose-phosphate 3 epimerase family ABC_tran PF00005.27 gi|452209528|ref|YP_007489642.1| - 5.3e-52 176.0 0.0 1.9e-26 93.2 0.0 2.5 2 1 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 gi|452209528|ref|YP_007489642.1| - 4.1e-09 36.7 3.4 0.0067 16.3 0.2 4.2 3 1 1 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|452209528|ref|YP_007489642.1| - 3.8e-08 33.0 0.4 0.004 16.9 0.1 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|452209528|ref|YP_007489642.1| - 1.1e-07 32.0 0.2 0.0096 15.8 0.0 2.6 2 1 0 2 2 2 2 RsgA GTPase AAA_23 PF13476.6 gi|452209528|ref|YP_007489642.1| - 4.5e-07 30.6 1.7 0.029 14.9 0.0 2.8 2 1 0 2 2 2 2 AAA domain TniB PF05621.11 gi|452209528|ref|YP_007489642.1| - 2.2e-06 27.2 0.7 0.00073 19.0 0.0 3.7 4 0 0 4 4 4 1 Bacterial TniB protein AAA_22 PF13401.6 gi|452209528|ref|YP_007489642.1| - 2.9e-06 27.6 3.3 0.084 13.1 0.0 3.8 4 0 0 4 4 4 2 AAA domain AAA_30 PF13604.6 gi|452209528|ref|YP_007489642.1| - 7.2e-06 25.8 0.6 0.13 12.0 0.1 3.1 4 0 0 4 4 4 2 AAA domain AAA_16 PF13191.6 gi|452209528|ref|YP_007489642.1| - 1.4e-05 25.5 0.0 0.14 12.5 0.0 2.6 2 0 0 2 2 2 2 AAA ATPase domain PRK PF00485.18 gi|452209528|ref|YP_007489642.1| - 5.7e-05 22.9 0.1 0.27 10.9 0.0 2.4 2 0 0 2 2 2 2 Phosphoribulokinase / Uridine kinase family SMC_N PF02463.19 gi|452209528|ref|YP_007489642.1| - 0.0001 21.8 0.0 4 6.8 0.0 4.0 3 1 0 3 3 3 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|452209528|ref|YP_007489642.1| - 0.00016 21.6 0.5 0.028 14.2 0.0 2.8 2 1 0 3 3 3 1 AAA ATPase domain NB-ARC PF00931.22 gi|452209528|ref|YP_007489642.1| - 0.00021 20.6 0.1 0.34 10.0 0.0 2.3 2 0 0 2 2 2 2 NB-ARC domain Rad17 PF03215.15 gi|452209528|ref|YP_007489642.1| - 0.00048 20.1 0.0 0.54 10.2 0.0 2.7 3 0 0 3 3 2 1 Rad17 P-loop domain SbcCD_C PF13558.6 gi|452209528|ref|YP_007489642.1| - 0.00088 19.5 0.2 0.46 10.8 0.0 3.1 2 2 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA PF00004.29 gi|452209528|ref|YP_007489642.1| - 0.0035 17.8 0.8 4.3 7.8 0.0 3.5 3 0 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 gi|452209528|ref|YP_007489642.1| - 0.0035 17.9 0.4 3.8 8.1 0.1 3.0 2 0 0 2 2 2 1 AAA domain MMR_HSR1 PF01926.23 gi|452209528|ref|YP_007489642.1| - 0.0038 17.3 0.4 1.1 9.3 0.1 3.0 3 0 0 3 3 2 1 50S ribosome-binding GTPase AAA_33 PF13671.6 gi|452209528|ref|YP_007489642.1| - 0.0044 17.2 0.2 0.91 9.7 0.0 2.7 3 0 0 3 3 2 1 AAA domain ATPase_2 PF01637.18 gi|452209528|ref|YP_007489642.1| - 0.0047 16.9 1.6 1.7 8.5 0.0 3.2 3 0 0 3 3 3 1 ATPase domain predominantly from Archaea MobB PF03205.14 gi|452209528|ref|YP_007489642.1| - 0.0096 15.8 0.4 5.4 6.9 0.1 2.6 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_25 PF13481.6 gi|452209528|ref|YP_007489642.1| - 0.012 15.2 0.3 20 4.7 0.1 3.6 4 0 0 4 4 4 0 AAA domain AAA_24 PF13479.6 gi|452209528|ref|YP_007489642.1| - 0.013 15.3 1.4 1.3 8.7 0.2 2.7 2 0 0 2 2 2 0 AAA domain APS_kinase PF01583.20 gi|452209528|ref|YP_007489642.1| - 0.015 15.2 0.1 4.4 7.2 0.0 2.6 2 0 0 2 2 2 0 Adenylylsulphate kinase NTPase_1 PF03266.15 gi|452209528|ref|YP_007489642.1| - 0.022 14.7 1.2 1.5 8.7 0.1 2.6 2 0 0 2 2 2 0 NTPase Mg_chelatase PF01078.21 gi|452209528|ref|YP_007489642.1| - 0.024 14.0 0.2 0.77 9.1 0.0 2.7 3 0 0 3 3 3 0 Magnesium chelatase, subunit ChlI AAA_28 PF13521.6 gi|452209528|ref|YP_007489642.1| - 0.026 14.8 1.0 3.4 7.9 0.1 3.1 3 1 0 3 3 3 0 AAA domain G-alpha PF00503.20 gi|452209528|ref|YP_007489642.1| - 0.028 13.6 0.3 2.7 7.0 0.0 2.5 2 1 0 2 2 2 0 G-protein alpha subunit AAA_14 PF13173.6 gi|452209528|ref|YP_007489642.1| - 0.039 14.0 1.2 27 4.8 0.1 3.5 3 0 0 3 3 3 0 AAA domain cobW PF02492.19 gi|452209528|ref|YP_007489642.1| - 0.049 13.2 0.9 2.7 7.5 0.1 2.5 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain TsaE PF02367.17 gi|452209528|ref|YP_007489642.1| - 0.056 13.4 0.7 2.2 8.3 0.0 2.8 2 1 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE RNA_helicase PF00910.22 gi|452209528|ref|YP_007489642.1| - 0.058 13.8 0.4 7.2 7.0 0.1 2.5 2 0 0 2 2 2 0 RNA helicase PduV-EutP PF10662.9 gi|452209528|ref|YP_007489642.1| - 0.061 13.1 0.1 3.6 7.3 0.0 2.4 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation IstB_IS21 PF01695.17 gi|452209528|ref|YP_007489642.1| - 0.068 12.9 0.1 16 5.2 0.0 3.1 3 0 0 3 3 3 0 IstB-like ATP binding protein AAA_5 PF07728.14 gi|452209528|ref|YP_007489642.1| - 0.094 12.7 0.8 4.9 7.2 0.1 3.0 3 0 0 3 3 2 0 AAA domain (dynein-related subfamily) AAA_7 PF12775.7 gi|452209528|ref|YP_007489642.1| - 0.097 12.2 0.1 4.4 6.8 0.1 2.4 2 0 0 2 2 2 0 P-loop containing dynein motor region NACHT PF05729.12 gi|452209528|ref|YP_007489642.1| - 0.1 12.5 3.9 2.6 7.9 0.2 3.1 4 0 0 4 4 2 0 NACHT domain PhoH PF02562.16 gi|452209528|ref|YP_007489642.1| - 0.12 11.8 0.0 21 4.5 0.0 2.6 2 0 0 2 2 2 0 PhoH-like protein MeaB PF03308.16 gi|452209528|ref|YP_007489642.1| - 0.13 11.3 0.3 0.3 10.0 0.0 1.7 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB DUF87 PF01935.17 gi|452209528|ref|YP_007489642.1| - 0.13 12.4 2.7 5.2 7.1 0.1 2.9 2 1 0 2 2 2 0 Helicase HerA, central domain CheB_methylest PF01339.17 gi|452209528|ref|YP_007489642.1| - 0.16 11.6 0.1 0.99 9.1 0.0 2.1 2 0 0 2 2 2 0 CheB methylesterase FMN_red PF03358.15 gi|452209529|ref|YP_007489643.1| - 8.2e-07 28.9 0.0 1.5e-06 28.0 0.0 1.4 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|452209529|ref|YP_007489643.1| - 8.8e-05 22.3 0.0 0.0001 22.1 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin-like fold Flavin_Reduct PF01613.18 gi|452209530|ref|YP_007489644.1| - 2.4e-18 66.7 0.0 3.6e-18 66.1 0.0 1.2 1 0 0 1 1 1 1 Flavin reductase like domain FMN_red PF03358.15 gi|452209530|ref|YP_007489644.1| - 0.082 12.6 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 NADPH-dependent FMN reductase MacB_PCD PF12704.7 gi|452209531|ref|YP_007489645.1| - 1.6e-22 80.8 4.0 3.6e-22 79.7 4.0 1.6 1 0 0 1 1 1 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|452209531|ref|YP_007489645.1| - 3.2e-11 43.5 5.7 3.2e-11 43.5 5.7 3.2 3 0 0 3 3 3 2 FtsX-like permease family TMEM141 PF15110.6 gi|452209531|ref|YP_007489645.1| - 0.12 12.9 0.1 0.35 11.5 0.1 1.7 1 0 0 1 1 1 0 TMEM141 protein family LptF_LptG PF03739.14 gi|452209531|ref|YP_007489645.1| - 1.5 7.5 8.0 0.52 9.1 4.4 2.0 2 0 0 2 2 2 0 Lipopolysaccharide export system permease LptF/LptG HATPase_c PF02518.26 gi|452209533|ref|YP_007489647.1| - 1.9e-32 112.1 0.1 6.2e-32 110.4 0.0 1.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|452209533|ref|YP_007489647.1| - 9.6e-18 64.0 0.1 2.3e-16 59.5 0.0 2.3 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.6 gi|452209533|ref|YP_007489647.1| - 4.8e-05 23.2 0.0 9e-05 22.3 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|452209533|ref|YP_007489647.1| - 0.00068 19.6 0.0 0.0013 18.7 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain NPCBM_assoc PF10633.9 gi|452209534|ref|YP_007489648.1| - 4e-08 33.4 0.0 0.082 13.2 0.0 3.9 4 0 0 4 4 4 3 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.11 gi|452209534|ref|YP_007489648.1| - 1.1e-06 28.8 1.0 0.00017 21.8 0.0 3.3 3 2 0 3 3 3 1 CARDB DUF11 PF01345.18 gi|452209534|ref|YP_007489648.1| - 0.00021 21.5 2.2 1.6 9.1 0.1 4.2 3 2 0 3 3 3 2 Domain of unknown function DUF11 HERV-K_REC PF15695.5 gi|452209534|ref|YP_007489648.1| - 0.17 12.0 0.6 18 5.4 0.2 2.3 2 0 0 2 2 2 0 Rec (regulator of expression encoded by corf) of HERV-K-113 ABC_tran PF00005.27 gi|452209535|ref|YP_007489649.1| - 1.9e-35 122.4 0.1 9.2e-35 120.1 0.0 1.9 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|452209535|ref|YP_007489649.1| - 7.6e-07 29.2 0.1 0.034 14.0 0.0 2.4 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|452209535|ref|YP_007489649.1| - 1.1e-06 28.2 0.4 4e-05 23.2 0.0 2.7 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|452209535|ref|YP_007489649.1| - 0.00055 19.6 2.0 0.0017 18.0 0.0 2.2 2 0 0 2 2 2 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|452209535|ref|YP_007489649.1| - 0.0029 17.5 0.0 0.0059 16.5 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 gi|452209535|ref|YP_007489649.1| - 0.014 15.7 0.0 0.034 14.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 gi|452209535|ref|YP_007489649.1| - 0.025 14.7 0.2 0.13 12.4 0.2 2.2 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_16 PF13191.6 gi|452209535|ref|YP_007489649.1| - 0.03 14.7 0.0 0.041 14.3 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA_23 PF13476.6 gi|452209535|ref|YP_007489649.1| - 0.051 14.1 0.1 0.051 14.1 0.1 1.9 2 1 0 2 2 2 0 AAA domain DUF3987 PF13148.6 gi|452209535|ref|YP_007489649.1| - 0.15 11.1 0.0 0.23 10.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) RNA_helicase PF00910.22 gi|452209535|ref|YP_007489649.1| - 0.17 12.3 0.4 0.8 10.1 0.0 2.1 2 0 0 2 2 2 0 RNA helicase AAA_24 PF13479.6 gi|452209535|ref|YP_007489649.1| - 0.17 11.6 0.0 0.43 10.3 0.0 1.6 2 0 0 2 2 2 0 AAA domain MacB_PCD PF12704.7 gi|452209536|ref|YP_007489650.1| - 2e-25 90.3 1.4 3.6e-25 89.5 1.4 1.4 1 0 0 1 1 1 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|452209536|ref|YP_007489650.1| - 5.5e-11 42.8 2.0 5.5e-11 42.8 2.0 3.2 3 0 0 3 3 3 2 FtsX-like permease family DUF4118 PF13493.6 gi|452209536|ref|YP_007489650.1| - 5.7 6.8 11.7 15 5.4 6.9 2.9 2 1 0 2 2 2 0 Domain of unknown function (DUF4118) DUF11 PF01345.18 gi|452209537|ref|YP_007489651.1| - 1.3e-08 35.1 1.0 0.0013 19.0 0.1 4.7 3 3 0 3 3 3 2 Domain of unknown function DUF11 CARDB PF07705.11 gi|452209537|ref|YP_007489651.1| - 3e-07 30.6 3.0 8.4e-05 22.8 0.1 3.4 3 1 1 4 4 4 2 CARDB NPCBM_assoc PF10633.9 gi|452209537|ref|YP_007489651.1| - 1.1e-06 28.8 0.1 0.3 11.4 0.0 4.1 4 0 0 4 4 4 3 NPCBM-associated, NEW3 domain of alpha-galactosidase PCC_BT PF18140.1 gi|452209537|ref|YP_007489651.1| - 0.18 12.2 0.2 0.67 10.3 0.1 2.1 2 1 0 2 2 2 0 Propionyl-coenzyme A carboxylase BT domain WTF PF03303.13 gi|452209537|ref|YP_007489651.1| - 0.19 11.5 0.5 0.34 10.6 0.5 1.3 1 0 0 1 1 1 0 WTF protein Cadherin-like PF12733.7 gi|452209537|ref|YP_007489651.1| - 0.21 12.1 5.8 20 5.8 3.1 4.1 1 1 1 3 3 3 0 Cadherin-like beta sandwich domain Pilin PF00114.19 gi|452209537|ref|YP_007489651.1| - 0.26 12.2 1.8 0.54 11.2 0.3 2.3 2 0 0 2 2 2 0 Pilin (bacterial filament) zf-C2H2_aberr PF17017.5 gi|452209541|ref|YP_007489655.1| - 0.0012 19.0 0.4 0.0012 19.0 0.4 1.0 1 0 0 1 1 1 1 Aberrant zinc-finger ABC2_membrane PF01061.24 gi|452209543|ref|YP_007489657.1| - 1.7e-23 83.2 23.1 1.7e-23 83.2 23.1 2.0 1 1 1 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|452209543|ref|YP_007489657.1| - 2.2e-10 40.2 27.7 2.2e-10 40.2 27.7 1.9 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC_tran PF00005.27 gi|452209544|ref|YP_007489658.1| - 7.2e-35 120.5 0.1 1.6e-34 119.3 0.0 1.6 2 0 0 2 2 2 1 ABC transporter DUF4162 PF13732.6 gi|452209544|ref|YP_007489658.1| - 6e-14 52.5 0.7 1.9e-13 50.9 0.3 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF4162) AAA_21 PF13304.6 gi|452209544|ref|YP_007489658.1| - 7.7e-12 45.6 0.5 3.3e-06 27.1 0.0 2.4 2 1 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|452209544|ref|YP_007489658.1| - 7e-06 26.0 1.1 0.035 13.8 0.2 3.0 2 1 1 3 3 3 2 AAA ATPase domain RsgA_GTPase PF03193.16 gi|452209544|ref|YP_007489658.1| - 7.6e-05 22.7 0.4 0.00028 20.8 0.1 2.0 2 1 0 2 2 2 1 RsgA GTPase AAA_29 PF13555.6 gi|452209544|ref|YP_007489658.1| - 0.0014 18.3 0.0 0.0027 17.4 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|452209544|ref|YP_007489658.1| - 0.0035 17.9 5.1 0.015 15.8 5.1 2.2 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|452209544|ref|YP_007489658.1| - 0.0036 16.8 0.4 0.025 14.0 0.4 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|452209544|ref|YP_007489658.1| - 0.012 15.9 0.5 0.062 13.6 0.3 2.2 1 1 1 2 2 2 0 AAA domain AAA_18 PF13238.6 gi|452209544|ref|YP_007489658.1| - 0.02 15.4 0.4 0.45 11.1 0.4 2.5 1 1 0 1 1 1 0 AAA domain Rad17 PF03215.15 gi|452209544|ref|YP_007489658.1| - 0.037 13.9 0.0 0.067 13.1 0.0 1.5 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_16 PF13191.6 gi|452209544|ref|YP_007489658.1| - 0.042 14.2 0.0 0.35 11.2 0.0 2.2 2 1 0 2 2 2 0 AAA ATPase domain ACT_4 PF13291.6 gi|452209544|ref|YP_007489658.1| - 0.063 13.9 0.4 1.3 9.7 0.0 2.6 2 0 0 2 2 2 0 ACT domain AAA_30 PF13604.6 gi|452209544|ref|YP_007489658.1| - 0.082 12.6 0.0 0.2 11.4 0.0 1.6 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 gi|452209544|ref|YP_007489658.1| - 0.091 12.8 1.7 0.38 10.8 0.1 2.3 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_27 PF13514.6 gi|452209544|ref|YP_007489658.1| - 0.13 11.9 0.0 0.29 10.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain ILEI PF15711.5 gi|452209544|ref|YP_007489658.1| - 0.13 12.7 0.0 0.79 10.2 0.0 2.4 1 1 0 1 1 1 0 Interleukin-like EMT inducer Ammonium_transp PF00909.21 gi|452209545|ref|YP_007489659.1| - 9.3e-123 409.8 37.3 1.2e-122 409.5 37.3 1.1 1 0 0 1 1 1 1 Ammonium Transporter Family DPM3 PF08285.11 gi|452209545|ref|YP_007489659.1| - 0.62 10.3 4.0 5.7 7.2 2.3 3.0 2 0 0 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) P-II PF00543.22 gi|452209546|ref|YP_007489660.1| - 4.6e-40 136.3 2.4 5.2e-40 136.2 2.4 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II PBP5_C PF07943.13 gi|452209546|ref|YP_007489660.1| - 0.0074 16.5 0.4 0.011 15.9 0.4 1.2 1 0 0 1 1 1 1 Penicillin-binding protein 5, C-terminal domain OSTbeta PF15048.6 gi|452209547|ref|YP_007489661.1| - 0.23 11.6 0.6 3.7 7.7 0.1 2.2 2 0 0 2 2 2 0 Organic solute transporter subunit beta protein HSP20 PF00011.21 gi|452209549|ref|YP_007489663.1| - 5.7e-06 26.4 0.2 0.00032 20.8 0.2 2.0 1 1 0 1 1 1 1 Hsp20/alpha crystallin family CS PF04969.16 gi|452209549|ref|YP_007489663.1| - 0.0056 17.7 0.0 0.0069 17.4 0.0 1.2 1 0 0 1 1 1 1 CS domain RIP PF00161.19 gi|452209549|ref|YP_007489663.1| - 0.024 14.2 0.0 0.025 14.2 0.0 1.1 1 0 0 1 1 1 0 Ribosome inactivating protein DUF1059 PF06348.11 gi|452209550|ref|YP_007489664.1| - 1.1e-10 41.6 2.6 1.4e-10 41.2 2.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1059) DUF832 PF05734.11 gi|452209550|ref|YP_007489664.1| - 0.0098 15.4 0.2 0.011 15.3 0.2 1.0 1 0 0 1 1 1 1 Herpesvirus protein of unknown function (DUF832) PhosphMutase PF10143.9 gi|452209550|ref|YP_007489664.1| - 0.013 15.4 0.0 0.014 15.3 0.0 1.1 1 0 0 1 1 1 0 2,3-bisphosphoglycerate-independent phosphoglycerate mutase TspO_MBR PF03073.15 gi|452209551|ref|YP_007489665.1| - 1.3e-46 158.0 21.3 1.5e-46 157.8 21.3 1.0 1 0 0 1 1 1 1 TspO/MBR family TctB PF07331.11 gi|452209551|ref|YP_007489665.1| - 0.64 10.3 12.8 0.85 9.9 12.8 1.2 1 0 0 1 1 1 0 Tripartite tricarboxylate transporter TctB family DUF3278 PF11683.8 gi|452209551|ref|YP_007489665.1| - 5.8 7.0 9.8 6.3 6.9 0.1 2.5 1 1 0 2 2 2 0 Protein of unknown function (DUF3278) Gln-synt_C PF00120.24 gi|452209552|ref|YP_007489666.1| - 7.5e-139 462.5 0.0 8.8e-139 462.3 0.0 1.0 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 gi|452209552|ref|YP_007489666.1| - 1e-28 98.9 0.0 2.2e-28 97.8 0.0 1.6 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain Gln-synt_N_2 PF16952.5 gi|452209552|ref|YP_007489666.1| - 6.2e-06 26.0 0.0 3.6e-05 23.5 0.0 2.1 1 1 0 1 1 1 1 Glutamine synthetase N-terminal domain Bmp PF02608.14 gi|452209552|ref|YP_007489666.1| - 0.2 10.6 0.0 0.34 9.8 0.0 1.3 1 0 0 1 1 1 0 ABC transporter substrate-binding protein PnrA-like GATase_6 PF13522.6 gi|452209554|ref|YP_007489668.1| - 1.8e-11 44.4 0.0 2.4e-09 37.5 0.0 2.2 2 0 0 2 2 2 2 Glutamine amidotransferase domain GATase_2 PF00310.21 gi|452209554|ref|YP_007489668.1| - 4.8e-08 32.1 0.5 1.5e-06 27.2 0.5 2.2 1 1 0 1 1 1 1 Glutamine amidotransferases class-II GATase_7 PF13537.6 gi|452209554|ref|YP_007489668.1| - 6.9e-06 26.0 0.0 0.15 12.0 0.0 2.2 2 0 0 2 2 2 2 Glutamine amidotransferase domain Glu_synthase PF01645.17 gi|452209555|ref|YP_007489669.1| - 2.1e-136 454.9 0.0 2.8e-136 454.5 0.0 1.1 1 0 0 1 1 1 1 Conserved region in glutamate synthase Glu_syn_central PF04898.14 gi|452209555|ref|YP_007489669.1| - 4e-14 52.8 0.0 1.5e-06 27.9 0.0 2.3 2 0 0 2 2 2 2 Glutamate synthase central domain FMN_dh PF01070.18 gi|452209555|ref|YP_007489669.1| - 8e-10 38.3 6.6 1.4e-07 30.9 3.4 3.0 3 0 0 3 3 3 2 FMN-dependent dehydrogenase IMPDH PF00478.25 gi|452209555|ref|YP_007489669.1| - 1.1e-09 37.8 5.9 3e-07 29.8 5.9 2.9 2 1 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain Fer4_10 PF13237.6 gi|452209555|ref|YP_007489669.1| - 3.9e-09 36.5 15.3 7.7e-06 25.9 12.3 2.8 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|452209555|ref|YP_007489669.1| - 4.5e-08 33.5 15.6 0.00017 22.1 13.3 3.3 2 1 2 4 4 4 4 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452209555|ref|YP_007489669.1| - 5.1e-08 33.0 15.2 5.6e-07 29.6 10.7 2.4 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|452209555|ref|YP_007489669.1| - 8.4e-08 32.0 21.6 3.3e-05 23.8 2.3 3.3 3 0 0 3 3 3 3 4Fe-4S binding domain Fer4 PF00037.27 gi|452209555|ref|YP_007489669.1| - 2.1e-07 30.4 21.9 1.3e-05 24.8 1.0 3.5 3 0 0 3 3 3 2 4Fe-4S binding domain NMO PF03060.15 gi|452209555|ref|YP_007489669.1| - 1.1e-06 28.2 7.9 3.4e-06 26.7 7.9 1.8 1 1 0 1 1 1 1 Nitronate monooxygenase Fer4_16 PF13484.6 gi|452209555|ref|YP_007489669.1| - 3.2e-06 28.0 10.6 0.0011 19.9 0.3 3.3 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|452209555|ref|YP_007489669.1| - 3.3e-06 27.1 9.3 3.3e-06 27.1 9.3 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452209555|ref|YP_007489669.1| - 8.6e-06 25.5 20.5 0.0082 16.2 1.6 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain DHO_dh PF01180.21 gi|452209555|ref|YP_007489669.1| - 1.1e-05 24.8 0.5 0.00021 20.6 0.4 2.2 2 0 0 2 2 2 1 Dihydroorotate dehydrogenase Fer4_8 PF13183.6 gi|452209555|ref|YP_007489669.1| - 9.5e-05 22.8 13.3 0.18 12.3 1.4 3.3 2 1 1 3 3 3 2 4Fe-4S dicluster domain His_biosynth PF00977.21 gi|452209555|ref|YP_007489669.1| - 0.002 17.6 0.3 0.0038 16.7 0.3 1.4 1 0 0 1 1 1 1 Histidine biosynthesis protein Fer4_17 PF13534.6 gi|452209555|ref|YP_007489669.1| - 0.0075 16.8 15.8 0.82 10.3 1.9 3.3 2 1 2 4 4 4 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|452209555|ref|YP_007489669.1| - 0.017 15.3 5.7 0.017 15.3 5.7 2.2 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|452209555|ref|YP_007489669.1| - 0.63 10.9 15.2 0.22 12.4 1.0 3.1 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|452209555|ref|YP_007489669.1| - 1.3 9.6 20.6 0.14 12.7 1.1 3.2 3 0 0 3 3 2 0 4Fe-4S single cluster domain of Ferredoxin I GXGXG PF01493.19 gi|452209556|ref|YP_007489670.1| - 1.4e-34 119.3 10.2 1.7e-34 119.1 10.2 1.1 1 0 0 1 1 1 1 GXGXG motif FrhB_FdhB_C PF04432.13 gi|452209557|ref|YP_007489671.1| - 1.2e-34 119.4 0.0 1.9e-34 118.7 0.0 1.3 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.13 gi|452209557|ref|YP_007489671.1| - 6.6e-19 67.8 0.0 1.2e-18 67.0 0.0 1.5 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4_6 PF12837.7 gi|452209557|ref|YP_007489671.1| - 3.8e-08 33.1 11.7 4.6e-06 26.5 1.8 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.27 gi|452209557|ref|YP_007489671.1| - 1.3e-07 31.2 2.8 1.3e-07 31.2 2.8 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|452209557|ref|YP_007489671.1| - 1.8e-06 28.0 8.6 1.8e-06 28.0 8.6 2.0 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|452209557|ref|YP_007489671.1| - 4.3e-05 24.0 9.0 4.3e-05 24.0 9.0 1.9 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452209557|ref|YP_007489671.1| - 0.00016 21.8 19.7 0.00086 19.4 10.1 2.3 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452209557|ref|YP_007489671.1| - 0.00033 20.6 2.0 0.00033 20.6 2.0 3.3 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_17 PF13534.6 gi|452209557|ref|YP_007489671.1| - 0.00098 19.6 4.4 0.074 13.6 0.1 2.7 3 0 0 3 3 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|452209557|ref|YP_007489671.1| - 0.001 19.4 13.6 0.005 17.2 0.9 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|452209557|ref|YP_007489671.1| - 0.0034 18.3 14.1 0.29 12.1 12.2 3.0 2 1 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_8 PF13183.6 gi|452209557|ref|YP_007489671.1| - 0.018 15.5 8.5 0.47 10.9 2.2 2.5 1 1 2 3 3 3 0 4Fe-4S dicluster domain DUF1344 PF07076.11 gi|452209557|ref|YP_007489671.1| - 0.021 14.7 0.0 0.048 13.6 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1344) Fer4_18 PF13746.6 gi|452209557|ref|YP_007489671.1| - 0.057 13.6 3.3 1.8 8.8 0.1 2.5 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|452209557|ref|YP_007489671.1| - 0.083 13.6 1.1 1.3 9.8 0.3 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|452209557|ref|YP_007489671.1| - 0.15 12.9 5.5 0.18 12.7 0.2 2.6 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|452209557|ref|YP_007489671.1| - 0.21 12.1 7.2 1.3 9.6 1.1 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_21 PF14697.6 gi|452209557|ref|YP_007489671.1| - 1.1 9.4 16.5 0.11 12.7 2.7 2.7 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|452209557|ref|YP_007489671.1| - 1.7 9.7 24.3 0.28 12.2 6.4 3.2 4 0 0 4 4 2 0 4Fe-4S binding domain Zn_dep_PLPC PF00882.18 gi|452209559|ref|YP_007489673.1| - 0.019 14.9 3.8 0.031 14.3 3.8 1.3 1 0 0 1 1 1 0 Zinc dependent phospholipase C CTXphi_pIII-N1 PF16710.5 gi|452209560|ref|YP_007489674.1| - 0.037 14.1 0.2 0.04 14.0 0.2 1.1 1 0 0 1 1 1 0 N-terminal N1 domain of Vibrio phage CTXphi pIII VSG_B PF13206.6 gi|452209561|ref|YP_007489675.1| - 0.0047 16.2 0.1 0.35 10.1 0.0 2.2 2 0 0 2 2 2 2 Trypanosomal VSG domain GST_N_2 PF13409.6 gi|452209561|ref|YP_007489675.1| - 0.066 13.5 0.0 0.5 10.7 0.0 2.3 3 0 0 3 3 3 0 Glutathione S-transferase, N-terminal domain Unstab_antitox PF09720.10 gi|452209561|ref|YP_007489675.1| - 0.085 12.9 0.1 0.34 11.0 0.0 2.0 2 0 0 2 2 2 0 Putative addiction module component Peptidase_M24 PF00557.24 gi|452209562|ref|YP_007489676.1| - 1.5e-40 139.2 0.0 1.9e-40 138.8 0.0 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 gi|452209562|ref|YP_007489676.1| - 3.1e-09 37.6 0.0 4.9e-09 36.9 0.0 1.3 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain CNP_C_terminal PF17839.1 gi|452209562|ref|YP_007489676.1| - 0.12 13.1 0.0 0.23 12.2 0.0 1.4 1 0 0 1 1 1 0 C-terminal domain of cyclic nucleotide phosphodiesterase DUF2284 PF10050.9 gi|452209563|ref|YP_007489677.1| - 9.2e-45 152.3 0.3 1.1e-44 152.1 0.3 1.0 1 0 0 1 1 1 1 Predicted metal-binding protein (DUF2284) Peptidase_S8 PF00082.22 gi|452209564|ref|YP_007489678.1| - 1.5e-18 67.1 3.0 7.8e-14 51.6 0.0 2.4 3 0 0 3 3 3 2 Subtilase family F420_oxidored PF03807.17 gi|452209565|ref|YP_007489679.1| - 2e-17 63.6 0.2 4.3e-17 62.5 0.2 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent DUF5633 PF18656.1 gi|452209565|ref|YP_007489679.1| - 0.0031 17.3 0.9 0.074 12.9 0.1 2.5 2 0 0 2 2 2 1 Family of unknown function (DUF5633) Sacchrp_dh_NADP PF03435.18 gi|452209565|ref|YP_007489679.1| - 0.0086 16.3 0.0 0.016 15.5 0.0 1.6 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Ldh_1_N PF00056.23 gi|452209565|ref|YP_007489679.1| - 0.02 15.0 0.1 0.034 14.3 0.1 1.3 1 0 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 gi|452209565|ref|YP_007489679.1| - 0.028 14.5 0.2 0.074 13.1 0.1 1.6 1 1 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase KR PF08659.10 gi|452209565|ref|YP_007489679.1| - 0.18 11.7 1.5 0.25 11.2 0.2 1.8 2 0 0 2 2 2 0 KR domain DXP_reductoisom PF02670.16 gi|452209565|ref|YP_007489679.1| - 0.33 11.7 2.5 10 6.9 0.0 2.5 2 1 1 3 3 3 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase Fer4_8 PF13183.6 gi|452209566|ref|YP_007489680.1| - 4.2e-13 49.5 7.2 8.4e-13 48.6 7.2 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|452209566|ref|YP_007489680.1| - 1.9e-09 37.9 7.1 3e-09 37.3 7.1 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452209566|ref|YP_007489680.1| - 3.1e-09 36.9 8.0 5.9e-09 35.9 8.0 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|452209566|ref|YP_007489680.1| - 3e-08 33.7 8.6 7.2e-08 32.4 8.6 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|452209566|ref|YP_007489680.1| - 7.4e-07 29.7 9.5 3e-06 27.7 9.7 1.9 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|452209566|ref|YP_007489680.1| - 1.3e-05 25.2 4.6 2.3e-05 24.4 4.6 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452209566|ref|YP_007489680.1| - 3.4e-05 23.7 10.7 0.00089 19.2 1.9 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.27 gi|452209566|ref|YP_007489680.1| - 0.00029 20.5 12.4 0.025 14.4 2.2 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|452209566|ref|YP_007489680.1| - 0.00069 19.9 9.5 0.0074 16.7 2.7 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|452209566|ref|YP_007489680.1| - 0.0047 17.8 17.9 0.15 13.1 3.2 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|452209566|ref|YP_007489680.1| - 0.042 14.8 12.7 0.53 11.3 12.8 2.3 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain Fer4_18 PF13746.6 gi|452209566|ref|YP_007489680.1| - 0.33 11.2 7.7 0.56 10.4 0.4 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|452209566|ref|YP_007489680.1| - 0.55 10.4 10.9 0.7 10.1 1.7 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain CCG PF02754.16 gi|452209567|ref|YP_007489681.1| - 8.3e-33 112.5 3.2 2.2e-19 69.4 0.5 2.2 2 0 0 2 2 2 2 Cysteine-rich domain DUF1284 PF06935.11 gi|452209568|ref|YP_007489682.1| - 3.3e-24 85.2 0.3 4.6e-24 84.8 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1284) Whib PF02467.16 gi|452209568|ref|YP_007489682.1| - 0.0016 19.0 1.3 2.1 9.0 0.0 2.3 2 0 0 2 2 2 2 Transcription factor WhiB DASH_Spc19 PF08287.11 gi|452209569|ref|YP_007489683.1| - 0.0056 16.6 0.0 0.0062 16.4 0.0 1.1 1 0 0 1 1 1 1 Spc19 SlyX PF04102.12 gi|452209569|ref|YP_007489683.1| - 0.019 15.6 0.1 0.026 15.1 0.1 1.2 1 0 0 1 1 1 0 SlyX DUF169 PF02596.15 gi|452209570|ref|YP_007489684.1| - 3e-59 200.4 0.0 3.4e-59 200.2 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 CbiA PF01656.23 gi|452209571|ref|YP_007489685.1| - 1.2e-13 51.3 0.0 1.6e-13 50.9 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fer4 PF00037.27 gi|452209571|ref|YP_007489685.1| - 1.2e-11 43.9 13.2 6.4e-07 28.9 2.1 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain ParA PF10609.9 gi|452209571|ref|YP_007489685.1| - 3.6e-09 36.4 0.5 0.0023 17.4 0.1 2.5 2 1 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase Fer4_6 PF12837.7 gi|452209571|ref|YP_007489685.1| - 3.8e-08 33.1 11.8 0.00044 20.2 1.1 2.9 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|452209571|ref|YP_007489685.1| - 2.1e-07 31.4 8.1 0.0039 17.8 1.7 2.7 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452209571|ref|YP_007489685.1| - 1.4e-06 28.0 12.8 0.0034 17.4 1.6 3.0 2 0 0 2 2 2 2 4Fe-4S binding domain AAA_31 PF13614.6 gi|452209571|ref|YP_007489685.1| - 1.8e-06 28.0 0.1 0.059 13.3 0.0 2.3 2 0 0 2 2 2 2 AAA domain Fer4_10 PF13237.6 gi|452209571|ref|YP_007489685.1| - 8.4e-06 25.8 10.4 0.00024 21.2 11.6 2.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452209571|ref|YP_007489685.1| - 2.9e-05 24.9 7.7 0.022 15.7 0.5 3.2 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_NifH PF00142.18 gi|452209571|ref|YP_007489685.1| - 4.9e-05 22.9 0.1 0.0087 15.5 0.0 2.4 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Fer4_9 PF13187.6 gi|452209571|ref|YP_007489685.1| - 0.00018 21.6 12.3 0.0011 19.0 12.2 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain AAA_16 PF13191.6 gi|452209571|ref|YP_007489685.1| - 0.00042 20.7 0.0 0.0019 18.6 0.0 1.9 2 0 0 2 2 2 1 AAA ATPase domain Fer4_21 PF14697.6 gi|452209571|ref|YP_007489685.1| - 0.0011 19.0 11.0 0.0011 19.0 11.0 3.3 2 2 2 4 4 4 3 4Fe-4S dicluster domain Herpeto_peptide PF14409.6 gi|452209571|ref|YP_007489685.1| - 0.0013 19.0 0.1 0.0035 17.5 0.1 1.7 1 0 0 1 1 1 1 Ribosomally synthesized peptide in Herpetosiphon FTHFS PF01268.19 gi|452209571|ref|YP_007489685.1| - 0.0018 16.6 0.0 0.0026 16.0 0.0 1.2 1 0 0 1 1 1 1 Formate--tetrahydrofolate ligase Fer4_17 PF13534.6 gi|452209571|ref|YP_007489685.1| - 0.0034 17.9 10.0 0.25 11.9 1.5 2.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain RsgA_GTPase PF03193.16 gi|452209571|ref|YP_007489685.1| - 0.0077 16.2 0.1 3.2 7.6 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase ArsA_ATPase PF02374.15 gi|452209571|ref|YP_007489685.1| - 0.018 14.2 0.4 0.035 13.3 0.4 1.4 1 0 0 1 1 1 0 Anion-transporting ATPase CBP_BcsQ PF06564.12 gi|452209571|ref|YP_007489685.1| - 0.027 14.0 0.0 2.7 7.4 0.0 2.3 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsQ Fer4_3 PF12798.7 gi|452209571|ref|YP_007489685.1| - 0.046 14.7 18.5 0.43 11.6 3.5 3.1 2 0 0 2 2 2 0 4Fe-4S binding domain AAA_25 PF13481.6 gi|452209571|ref|YP_007489685.1| - 0.053 13.1 0.7 0.66 9.5 0.6 2.1 2 0 0 2 2 2 0 AAA domain Fer4_15 PF13459.6 gi|452209571|ref|YP_007489685.1| - 0.055 14.2 13.2 0.38 11.5 2.5 2.9 1 1 1 2 2 2 0 4Fe-4S single cluster domain ABC_tran PF00005.27 gi|452209571|ref|YP_007489685.1| - 0.058 13.9 0.0 0.14 12.7 0.0 1.6 1 0 0 1 1 1 0 ABC transporter NACHT PF05729.12 gi|452209571|ref|YP_007489685.1| - 0.083 12.8 0.1 0.2 11.6 0.0 1.7 2 0 0 2 2 1 0 NACHT domain NB-ARC PF00931.22 gi|452209571|ref|YP_007489685.1| - 0.17 11.0 0.1 0.46 9.6 0.1 1.6 2 0 0 2 2 2 0 NB-ARC domain Fer4_8 PF13183.6 gi|452209571|ref|YP_007489685.1| - 0.18 12.3 14.2 1.1e+03 0.1 14.2 2.6 1 1 0 1 1 1 0 4Fe-4S dicluster domain PhoH PF02562.16 gi|452209571|ref|YP_007489685.1| - 0.22 11.0 0.3 8.8 5.7 0.2 2.2 2 0 0 2 2 2 0 PhoH-like protein Fer4_4 PF12800.7 gi|452209571|ref|YP_007489685.1| - 0.3 11.7 14.2 0.17 12.5 1.7 3.1 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 gi|452209571|ref|YP_007489685.1| - 1.1 9.8 11.9 1.2 9.7 1.3 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I CbiA PF01656.23 gi|452209572|ref|YP_007489686.1| - 2.3e-18 66.5 0.0 3e-18 66.1 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|452209572|ref|YP_007489686.1| - 2.8e-15 56.4 0.0 3.9e-09 36.3 0.0 3.0 2 1 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase Fer4 PF00037.27 gi|452209572|ref|YP_007489686.1| - 9.9e-11 41.0 14.2 9.9e-06 25.2 2.1 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|452209572|ref|YP_007489686.1| - 4.4e-09 36.0 12.7 4e-05 23.5 0.8 2.9 3 0 0 3 3 3 2 4Fe-4S binding domain AAA_31 PF13614.6 gi|452209572|ref|YP_007489686.1| - 1.5e-06 28.2 0.0 7.1e-05 22.8 0.0 2.1 2 0 0 2 2 2 1 AAA domain Fer4_21 PF14697.6 gi|452209572|ref|YP_007489686.1| - 5.4e-06 26.4 5.0 1.3e-05 25.2 5.0 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452209572|ref|YP_007489686.1| - 1.1e-05 26.2 6.8 0.00025 21.9 0.4 2.6 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|452209572|ref|YP_007489686.1| - 0.00011 22.3 8.7 0.0025 18.0 9.3 2.4 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|452209572|ref|YP_007489686.1| - 0.00012 22.6 11.4 0.012 16.1 0.3 2.7 3 0 0 3 3 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|452209572|ref|YP_007489686.1| - 0.00012 22.2 19.9 0.0021 18.1 11.3 2.6 2 1 1 3 3 2 2 4Fe-4S dicluster domain AAA_25 PF13481.6 gi|452209572|ref|YP_007489686.1| - 0.0018 17.9 0.0 0.0034 17.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_26 PF13500.6 gi|452209572|ref|YP_007489686.1| - 0.0019 18.0 0.1 0.046 13.5 0.0 2.2 2 0 0 2 2 2 1 AAA domain Fer4_NifH PF00142.18 gi|452209572|ref|YP_007489686.1| - 0.0046 16.4 0.0 0.26 10.7 0.0 2.2 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ArsA_ATPase PF02374.15 gi|452209572|ref|YP_007489686.1| - 0.0046 16.2 0.3 0.0083 15.3 0.3 1.4 1 0 0 1 1 1 1 Anion-transporting ATPase Fer4_8 PF13183.6 gi|452209572|ref|YP_007489686.1| - 0.0049 17.3 7.5 0.38 11.2 0.9 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452209572|ref|YP_007489686.1| - 0.02 15.0 2.0 0.02 15.0 2.0 3.1 3 0 0 3 3 3 0 4Fe-4S binding domain MipZ PF09140.11 gi|452209572|ref|YP_007489686.1| - 0.035 13.4 0.0 0.047 13.0 0.0 1.2 1 0 0 1 1 1 0 ATPase MipZ Fer4_17 PF13534.6 gi|452209572|ref|YP_007489686.1| - 0.058 14.0 12.6 0.16 12.6 2.1 2.5 1 1 0 2 2 2 0 4Fe-4S dicluster domain PhoH PF02562.16 gi|452209572|ref|YP_007489686.1| - 0.078 12.4 0.2 0.12 11.8 0.2 1.2 1 0 0 1 1 1 0 PhoH-like protein SKI PF01202.22 gi|452209572|ref|YP_007489686.1| - 0.11 12.6 0.0 3.6 7.7 0.0 2.1 2 0 0 2 2 2 0 Shikimate kinase DUF2075 PF09848.9 gi|452209572|ref|YP_007489686.1| - 0.18 11.0 0.0 0.24 10.6 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Fer4_3 PF12798.7 gi|452209572|ref|YP_007489686.1| - 2.8 9.1 20.9 4.2 8.5 1.9 3.4 3 0 0 3 3 3 0 4Fe-4S binding domain Nitro_FeMo-Co PF02579.17 gi|452209573|ref|YP_007489687.1| - 5.3e-20 71.6 0.0 7.4e-20 71.1 0.0 1.2 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor DUF134 PF02001.16 gi|452209574|ref|YP_007489688.1| - 5.7e-19 68.5 0.5 7e-19 68.2 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF134 HTH_23 PF13384.6 gi|452209574|ref|YP_007489688.1| - 0.00038 20.2 0.2 0.00069 19.3 0.1 1.4 1 1 0 1 1 1 1 Homeodomain-like domain Sigma70_r4_2 PF08281.12 gi|452209574|ref|YP_007489688.1| - 0.0014 18.3 0.1 0.0018 17.9 0.1 1.2 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_ECF PF07638.11 gi|452209574|ref|YP_007489688.1| - 0.0033 17.3 1.2 0.0054 16.7 0.5 1.6 2 0 0 2 2 2 1 ECF sigma factor HTH_31 PF13560.6 gi|452209574|ref|YP_007489688.1| - 0.023 15.0 0.9 0.034 14.5 0.9 1.6 1 1 0 1 1 1 0 Helix-turn-helix domain KORA PF16509.5 gi|452209574|ref|YP_007489688.1| - 0.026 14.8 0.0 0.03 14.6 0.0 1.3 1 1 0 1 1 1 0 TrfB plasmid transcriptional repressor Sigma70_r4 PF04545.16 gi|452209574|ref|YP_007489688.1| - 0.027 14.0 0.3 0.046 13.2 0.3 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_3 PF01381.22 gi|452209574|ref|YP_007489688.1| - 0.09 12.8 0.1 0.24 11.5 0.0 1.8 1 1 0 1 1 1 0 Helix-turn-helix HTH_11 PF08279.12 gi|452209574|ref|YP_007489688.1| - 0.091 12.7 0.2 0.59 10.1 0.0 2.1 1 1 1 2 2 2 0 HTH domain HTH_10 PF04967.12 gi|452209574|ref|YP_007489688.1| - 0.12 12.2 0.3 0.24 11.2 0.0 1.6 2 0 0 2 2 2 0 HTH DNA binding domain ParA PF10609.9 gi|452209575|ref|YP_007489689.1| - 3.2e-94 315.0 0.0 3.9e-94 314.7 0.0 1.0 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 gi|452209575|ref|YP_007489689.1| - 3.5e-15 56.2 0.0 1.2e-14 54.4 0.0 1.9 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|452209575|ref|YP_007489689.1| - 4.5e-09 36.5 0.3 1.4e-07 31.6 0.3 2.2 1 1 0 1 1 1 1 AAA domain ArsA_ATPase PF02374.15 gi|452209575|ref|YP_007489689.1| - 3.8e-07 29.6 0.0 7.7e-07 28.6 0.0 1.5 1 0 0 1 1 1 1 Anion-transporting ATPase MipZ PF09140.11 gi|452209575|ref|YP_007489689.1| - 9.7e-07 28.3 0.0 1.7e-06 27.6 0.0 1.5 1 1 0 1 1 1 1 ATPase MipZ Fer4_NifH PF00142.18 gi|452209575|ref|YP_007489689.1| - 1.6e-06 27.8 0.0 2.9e-05 23.7 0.1 2.1 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_25 PF13481.6 gi|452209575|ref|YP_007489689.1| - 7.7e-05 22.4 0.0 0.00014 21.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain CBP_BcsQ PF06564.12 gi|452209575|ref|YP_007489689.1| - 0.0009 18.8 0.0 0.48 9.9 0.2 2.2 2 0 0 2 2 2 2 Cellulose biosynthesis protein BcsQ MeaB PF03308.16 gi|452209575|ref|YP_007489689.1| - 0.00096 18.2 0.2 0.0017 17.4 0.2 1.4 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB CLP1_P PF16575.5 gi|452209575|ref|YP_007489689.1| - 0.0072 16.1 0.0 0.012 15.4 0.0 1.3 1 0 0 1 1 1 1 mRNA cleavage and polyadenylation factor CLP1 P-loop RsgA_GTPase PF03193.16 gi|452209575|ref|YP_007489689.1| - 0.011 15.6 0.3 0.02 14.8 0.1 1.5 2 0 0 2 2 1 0 RsgA GTPase SRP54 PF00448.22 gi|452209575|ref|YP_007489689.1| - 0.021 14.5 0.1 0.038 13.6 0.1 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain APS_kinase PF01583.20 gi|452209575|ref|YP_007489689.1| - 0.03 14.2 0.1 0.053 13.4 0.1 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase VirC1 PF07015.11 gi|452209575|ref|YP_007489689.1| - 0.03 13.6 0.1 0.053 12.8 0.1 1.2 1 0 0 1 1 1 0 VirC1 protein NB-ARC PF00931.22 gi|452209575|ref|YP_007489689.1| - 0.034 13.3 0.6 0.055 12.6 0.2 1.5 2 0 0 2 2 2 0 NB-ARC domain AAA_26 PF13500.6 gi|452209575|ref|YP_007489689.1| - 0.043 13.6 0.8 2.8 7.7 0.2 2.3 2 1 0 2 2 2 0 AAA domain Cytochrom_B559 PF00283.19 gi|452209575|ref|YP_007489689.1| - 0.048 13.1 0.3 0.086 12.3 0.3 1.4 1 0 0 1 1 1 0 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits Zeta_toxin PF06414.12 gi|452209575|ref|YP_007489689.1| - 0.23 10.7 0.0 0.34 10.2 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin zf-ribbon_3 PF13248.6 gi|452209575|ref|YP_007489689.1| - 0.32 10.5 1.9 0.55 9.7 0.5 2.0 2 0 0 2 2 2 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|452209575|ref|YP_007489689.1| - 0.33 11.0 0.5 4.8 7.2 0.2 2.4 2 0 0 2 2 2 0 Transposase zinc-ribbon domain Thioredoxin PF00085.20 gi|452209576|ref|YP_007489690.1| - 5.7e-14 52.0 0.0 7.7e-14 51.5 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_7 PF13899.6 gi|452209576|ref|YP_007489690.1| - 0.00047 20.3 0.0 0.0011 19.1 0.0 1.6 1 1 0 1 1 1 1 Thioredoxin-like Thioredoxin_8 PF13905.6 gi|452209576|ref|YP_007489690.1| - 0.0013 19.0 0.0 0.0025 18.1 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin-like TraF PF13728.6 gi|452209576|ref|YP_007489690.1| - 0.0048 16.7 0.0 0.0073 16.2 0.0 1.3 1 0 0 1 1 1 1 F plasmid transfer operon protein AhpC-TSA PF00578.21 gi|452209576|ref|YP_007489690.1| - 0.0068 16.3 0.0 0.01 15.8 0.0 1.5 1 1 0 1 1 1 1 AhpC/TSA family Thioredoxin_2 PF13098.6 gi|452209576|ref|YP_007489690.1| - 0.008 16.6 0.0 0.013 15.9 0.0 1.5 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_9 PF14595.6 gi|452209576|ref|YP_007489690.1| - 0.027 14.2 0.0 0.04 13.7 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin Redoxin PF08534.10 gi|452209576|ref|YP_007489690.1| - 0.03 14.0 0.0 0.039 13.7 0.0 1.3 1 0 0 1 1 1 0 Redoxin DIM1 PF02966.16 gi|452209576|ref|YP_007489690.1| - 0.034 13.9 0.0 0.044 13.6 0.0 1.2 1 0 0 1 1 1 0 Mitosis protein DIM1 DUF4972 PF16342.5 gi|452209576|ref|YP_007489690.1| - 0.047 13.4 0.0 0.065 12.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4972) DUF836 PF05768.14 gi|452209576|ref|YP_007489690.1| - 0.055 13.9 0.0 0.092 13.2 0.0 1.5 1 1 0 1 1 1 0 Glutaredoxin-like domain (DUF836) DsbD PF02683.15 gi|452209577|ref|YP_007489691.1| - 1.6e-33 116.4 25.1 3.8e-33 115.2 25.1 1.5 1 1 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DsbD_2 PF13386.6 gi|452209577|ref|YP_007489691.1| - 4.7e-13 49.5 19.5 7.9e-13 48.8 19.5 1.4 1 1 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region MerE PF05052.12 gi|452209577|ref|YP_007489691.1| - 0.0038 17.1 8.8 0.31 11.0 1.4 2.9 2 1 1 3 3 3 2 MerE protein DUF3169 PF11368.8 gi|452209577|ref|YP_007489691.1| - 0.064 12.8 5.5 0.49 9.9 1.7 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3169) Colicin PF01024.19 gi|452209577|ref|YP_007489691.1| - 0.54 10.1 4.4 1 9.2 4.4 1.4 1 0 0 1 1 1 0 Colicin pore forming domain CbiC PF02570.15 gi|452209578|ref|YP_007489692.1| - 1.1e-61 208.0 0.7 1.3e-61 207.7 0.7 1.1 1 0 0 1 1 1 1 Precorrin-8X methylmutase PglD_N PF17836.1 gi|452209578|ref|YP_007489692.1| - 0.088 13.5 0.0 0.2 12.3 0.0 1.5 1 0 0 1 1 1 0 PglD N-terminal domain TP_methylase PF00590.20 gi|452209579|ref|YP_007489693.1| - 4.5e-36 124.8 0.6 5.4e-36 124.5 0.6 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases TP_methylase PF00590.20 gi|452209580|ref|YP_007489694.1| - 2.1e-45 155.3 0.2 2.4e-45 155.1 0.2 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Radical_SAM PF04055.21 gi|452209580|ref|YP_007489694.1| - 0.0087 16.5 0.1 0.022 15.2 0.1 1.7 1 1 0 1 1 1 1 Radical SAM superfamily TP_methylase PF00590.20 gi|452209581|ref|YP_007489695.1| - 3.5e-34 118.6 0.0 1.3e-33 116.8 0.0 1.7 1 1 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases HMGL-like PF00682.19 gi|452209582|ref|YP_007489696.1| - 1.7e-34 119.6 0.0 2.3e-34 119.2 0.0 1.1 1 0 0 1 1 1 1 HMGL-like Iso_dh PF00180.20 gi|452209583|ref|YP_007489697.1| - 3.3e-84 283.0 0.0 4e-84 282.7 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Acetyltransf_CG PF14542.6 gi|452209583|ref|YP_007489697.1| - 0.024 14.8 0.0 0.53 10.5 0.0 2.3 2 0 0 2 2 2 0 GCN5-related N-acetyl-transferase TatD_DNase PF01026.21 gi|452209584|ref|YP_007489698.1| - 2.7e-24 85.9 0.0 3.5e-24 85.6 0.0 1.1 1 0 0 1 1 1 1 TatD related DNase Amidohydro_1 PF01979.20 gi|452209584|ref|YP_007489698.1| - 0.05 12.9 0.1 4.2 6.6 0.1 2.3 1 1 1 2 2 2 0 Amidohydrolase family HTH_3 PF01381.22 gi|452209585|ref|YP_007489699.1| - 8.6e-10 38.5 1.1 1.3e-09 38.0 1.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|452209585|ref|YP_007489699.1| - 1.7e-08 34.4 0.6 1.7e-08 34.4 0.6 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|452209585|ref|YP_007489699.1| - 1.1e-07 32.1 0.0 1.6e-07 31.5 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|452209585|ref|YP_007489699.1| - 3.9e-05 23.4 0.9 6.3e-05 22.7 0.9 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.6 gi|452209585|ref|YP_007489699.1| - 0.094 12.7 0.2 0.16 12.0 0.2 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain zinc-ribbons_6 PF07191.12 gi|452209585|ref|YP_007489699.1| - 0.41 10.7 2.8 0.65 10.0 2.8 1.3 1 0 0 1 1 1 0 zinc-ribbons AAA PF00004.29 gi|452209586|ref|YP_007489700.1| - 5e-44 149.9 0.2 2.2e-43 147.9 0.0 2.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|452209586|ref|YP_007489700.1| - 2.8e-16 59.0 0.8 7.3e-16 57.7 0.8 1.7 1 0 0 1 1 1 1 AAA+ lid domain Prot_ATP_ID_OB PF16450.5 gi|452209586|ref|YP_007489700.1| - 1.2e-10 41.1 0.0 2.6e-10 40.1 0.0 1.6 1 0 0 1 1 1 1 Proteasomal ATPase OB C-terminal domain AAA_5 PF07728.14 gi|452209586|ref|YP_007489700.1| - 2.9e-08 33.8 0.6 1.1e-07 31.9 0.2 2.2 2 2 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|452209586|ref|YP_007489700.1| - 5.9e-07 30.0 0.5 0.00026 21.4 0.1 3.1 2 1 1 3 3 3 1 AAA ATPase domain DUF815 PF05673.13 gi|452209586|ref|YP_007489700.1| - 1.6e-06 27.5 0.0 3.3e-06 26.4 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_2 PF07724.14 gi|452209586|ref|YP_007489700.1| - 1.1e-05 25.6 0.5 2.7e-05 24.4 0.0 1.8 2 0 0 2 2 1 1 AAA domain (Cdc48 subfamily) Prot_ATP_OB_N PF17758.1 gi|452209586|ref|YP_007489700.1| - 6.8e-05 22.4 0.0 0.00018 21.1 0.0 1.8 1 0 0 1 1 1 1 Proteasomal ATPase OB N-terminal domain Filament PF00038.21 gi|452209586|ref|YP_007489700.1| - 0.00014 21.6 1.3 0.00014 21.6 1.3 1.8 2 0 0 2 2 2 1 Intermediate filament protein RuvB_N PF05496.12 gi|452209586|ref|YP_007489700.1| - 0.00032 20.5 0.0 0.00089 19.0 0.0 1.7 2 0 0 2 2 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_18 PF13238.6 gi|452209586|ref|YP_007489700.1| - 0.00036 21.1 0.6 0.0036 17.8 0.0 2.6 3 0 0 3 3 3 1 AAA domain AAA_22 PF13401.6 gi|452209586|ref|YP_007489700.1| - 0.00074 19.8 3.5 0.05 13.9 0.1 3.0 2 1 1 3 3 3 1 AAA domain ATPase PF06745.13 gi|452209586|ref|YP_007489700.1| - 0.0011 18.3 2.8 0.14 11.5 0.0 3.1 2 1 1 3 3 3 1 KaiC AAA_28 PF13521.6 gi|452209586|ref|YP_007489700.1| - 0.0025 18.1 0.0 0.0055 17.0 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|452209586|ref|YP_007489700.1| - 0.0031 17.7 0.1 0.0074 16.5 0.1 1.8 1 1 0 1 1 1 1 AAA domain APG6_N PF17675.1 gi|452209586|ref|YP_007489700.1| - 0.0032 18.0 2.9 0.0032 18.0 2.9 2.2 3 0 0 3 3 1 1 Apg6 coiled-coil region Rab5-bind PF09311.11 gi|452209586|ref|YP_007489700.1| - 0.0049 16.3 1.3 0.011 15.2 1.3 1.5 1 0 0 1 1 1 1 Rabaptin-like protein AAA_3 PF07726.11 gi|452209586|ref|YP_007489700.1| - 0.0063 16.4 0.0 0.013 15.3 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.6 gi|452209586|ref|YP_007489700.1| - 0.01 15.9 0.0 0.035 14.2 0.0 1.9 1 0 0 1 1 1 0 AAA domain Spc7 PF08317.11 gi|452209586|ref|YP_007489700.1| - 0.014 14.3 1.8 0.034 13.0 0.4 2.3 3 0 0 3 3 3 0 Spc7 kinetochore protein Phage_GP20 PF06810.11 gi|452209586|ref|YP_007489700.1| - 0.017 14.9 2.0 0.53 10.1 0.0 2.6 2 0 0 2 2 2 0 Phage minor structural protein GP20 Sigma54_activat PF00158.26 gi|452209586|ref|YP_007489700.1| - 0.022 14.5 0.1 0.46 10.2 0.0 2.5 2 1 0 2 2 2 0 Sigma-54 interaction domain AAA_17 PF13207.6 gi|452209586|ref|YP_007489700.1| - 0.023 15.1 0.6 0.14 12.5 0.1 2.6 2 2 0 2 2 2 0 AAA domain CEP63 PF17045.5 gi|452209586|ref|YP_007489700.1| - 0.024 14.6 2.9 0.062 13.2 2.9 1.6 1 0 0 1 1 1 0 Centrosomal protein of 63 kDa TIP49 PF06068.13 gi|452209586|ref|YP_007489700.1| - 0.024 13.8 0.0 0.046 12.9 0.0 1.4 1 0 0 1 1 1 0 TIP49 P-loop domain IstB_IS21 PF01695.17 gi|452209586|ref|YP_007489700.1| - 0.024 14.3 0.1 0.12 12.1 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein ATPase_2 PF01637.18 gi|452209586|ref|YP_007489700.1| - 0.031 14.2 2.0 7.5 6.4 0.1 3.1 2 1 1 3 3 3 0 ATPase domain predominantly from Archaea bZIP_2 PF07716.15 gi|452209586|ref|YP_007489700.1| - 0.045 13.8 0.5 0.045 13.8 0.5 3.1 2 1 1 3 3 2 0 Basic region leucine zipper ADIP PF11559.8 gi|452209586|ref|YP_007489700.1| - 0.05 13.7 2.5 0.11 12.6 2.5 1.5 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding Mg_chelatase PF01078.21 gi|452209586|ref|YP_007489700.1| - 0.067 12.6 0.0 0.18 11.2 0.0 1.7 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI DUF3450 PF11932.8 gi|452209586|ref|YP_007489700.1| - 0.12 11.7 3.3 0.36 10.1 3.3 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) AAA_13 PF13166.6 gi|452209586|ref|YP_007489700.1| - 0.15 10.7 2.4 1 7.9 0.4 2.4 3 0 0 3 3 3 0 AAA domain ABC_tran PF00005.27 gi|452209586|ref|YP_007489700.1| - 0.21 12.1 1.3 4.1 7.9 0.0 2.9 3 1 0 3 3 3 0 ABC transporter DUF5082 PF16888.5 gi|452209586|ref|YP_007489700.1| - 0.64 10.3 5.4 6.1 7.1 2.8 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF5082) ZapB PF06005.12 gi|452209586|ref|YP_007489700.1| - 2.3 8.7 11.7 3.3 8.2 6.8 3.1 3 0 0 3 3 3 0 Cell division protein ZapB Tektin PF03148.14 gi|452209586|ref|YP_007489700.1| - 3.6 6.3 12.2 0.15 10.8 3.8 2.5 3 0 0 3 3 3 0 Tektin family TSC22 PF01166.18 gi|452209586|ref|YP_007489700.1| - 7.3 7.0 7.0 8.7 6.7 0.4 3.1 3 1 0 3 3 2 0 TSC-22/dip/bun family DUF99 PF01949.16 gi|452209587|ref|YP_007489701.1| - 1.6e-66 223.3 0.1 1.7e-66 223.1 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF99 CutC PF03932.14 gi|452209587|ref|YP_007489701.1| - 0.037 13.5 0.2 0.82 9.1 0.0 2.1 2 0 0 2 2 2 0 CutC family Tubulin PF00091.25 gi|452209588|ref|YP_007489702.1| - 1.5e-41 142.8 0.9 2.7e-41 142.0 0.9 1.4 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.8 gi|452209588|ref|YP_007489702.1| - 7.2e-35 119.2 0.9 2.3e-34 117.6 0.9 1.9 1 0 0 1 1 1 1 FtsZ family, C-terminal domain DUF3602 PF12223.8 gi|452209588|ref|YP_007489702.1| - 0.03 14.9 0.3 0.075 13.6 0.3 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3602) NAD_binding_10 PF13460.6 gi|452209588|ref|YP_007489702.1| - 0.051 13.5 0.1 0.15 12.0 0.1 1.8 1 0 0 1 1 1 0 NAD(P)H-binding CENP-X PF09415.10 gi|452209588|ref|YP_007489702.1| - 0.12 12.7 0.1 0.47 10.8 0.1 2.0 1 0 0 1 1 1 0 CENP-S associating Centromere protein X SecE PF00584.20 gi|452209589|ref|YP_007489703.1| - 1.1e-05 25.2 0.2 1.3e-05 25.0 0.2 1.1 1 0 0 1 1 1 1 SecE/Sec61-gamma subunits of protein translocation complex Spt5-NGN PF03439.13 gi|452209590|ref|YP_007489704.1| - 8.3e-25 86.5 0.1 1.2e-24 86.0 0.1 1.3 1 0 0 1 1 1 1 Early transcription elongation factor of RNA pol II, NGN section KOW PF00467.29 gi|452209590|ref|YP_007489704.1| - 1.1e-06 28.4 1.1 8e-06 25.6 0.3 2.3 2 0 0 2 2 2 1 KOW motif Ribosomal_L11_N PF03946.14 gi|452209591|ref|YP_007489705.1| - 1.2e-24 85.9 1.0 1.2e-24 85.9 1.0 1.8 2 0 0 2 2 2 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.19 gi|452209591|ref|YP_007489705.1| - 3.6e-22 78.6 0.5 3.6e-22 78.6 0.5 1.7 2 0 0 2 2 2 1 Ribosomal protein L11, RNA binding domain Ribosomal_L1 PF00687.21 gi|452209592|ref|YP_007489706.1| - 1.5e-44 152.2 0.1 1.8e-44 152.0 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family Ribosomal_L10 PF00466.20 gi|452209593|ref|YP_007489707.1| - 1.1e-23 83.3 0.2 2.7e-23 82.0 0.2 1.6 1 0 0 1 1 1 1 Ribosomal protein L10 RL10P_insert PF17777.1 gi|452209593|ref|YP_007489707.1| - 6.1e-20 71.0 0.2 1.5e-19 69.8 0.1 1.6 2 0 0 2 2 2 1 Insertion domain in 60S ribosomal protein L10P Ribosomal_60s PF00428.19 gi|452209593|ref|YP_007489707.1| - 0.00071 20.1 26.0 0.00071 20.1 26.0 3.0 3 1 0 3 3 3 1 60s Acidic ribosomal protein Rab5-bind PF09311.11 gi|452209593|ref|YP_007489707.1| - 0.02 14.3 0.8 0.035 13.5 0.8 1.3 1 0 0 1 1 1 0 Rabaptin-like protein WRNPLPNID PF15017.6 gi|452209593|ref|YP_007489707.1| - 0.1 13.5 1.9 0.22 12.4 1.9 1.6 1 0 0 1 1 1 0 Putative WW-binding domain and destruction box UCR_Fe-S_N PF10399.9 gi|452209593|ref|YP_007489707.1| - 0.41 10.0 3.2 0.83 9.1 3.2 1.5 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DUF2780 PF11075.8 gi|452209593|ref|YP_007489707.1| - 4.9 7.3 6.7 2.3 8.3 0.0 2.9 2 1 1 3 3 3 0 Protein of unknown function VcgC/VcgE (DUF2780) FSAP_sig_propep PF03032.15 gi|452209593|ref|YP_007489707.1| - 9.7 6.3 8.4 22 5.2 8.4 1.5 1 0 0 1 1 1 0 Frog skin active peptide family signal and propeptide Ribosomal_60s PF00428.19 gi|452209594|ref|YP_007489708.1| - 2.4e-12 47.3 14.7 2.7e-12 47.1 14.4 1.3 1 1 0 1 1 1 1 60s Acidic ribosomal protein TetR_C_31 PF17940.1 gi|452209594|ref|YP_007489708.1| - 0.002 18.3 4.3 0.0027 17.9 4.3 1.1 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain Radical_SAM PF04055.21 gi|452209595|ref|YP_007489709.1| - 9.2e-15 55.4 0.1 1.9e-14 54.4 0.1 1.6 1 1 0 1 1 1 1 Radical SAM superfamily DUF3463 PF11946.8 gi|452209595|ref|YP_007489709.1| - 1.8e-07 31.0 0.1 3.7e-07 30.0 0.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF3463) SPASM PF13186.6 gi|452209595|ref|YP_007489709.1| - 0.0018 18.7 0.6 0.0018 18.7 0.6 2.3 2 0 0 2 2 2 1 Iron-sulfur cluster-binding domain HicB_lk_antitox PF15919.5 gi|452209595|ref|YP_007489709.1| - 0.0024 18.0 0.0 0.0065 16.6 0.0 1.7 1 0 0 1 1 1 1 HicB_like antitoxin of bacterial toxin-antitoxin system Fer4_12 PF13353.6 gi|452209595|ref|YP_007489709.1| - 0.004 17.4 0.0 0.012 15.9 0.0 1.9 1 1 0 1 1 1 1 4Fe-4S single cluster domain ChuX_HutX PF06228.13 gi|452209595|ref|YP_007489709.1| - 0.14 11.9 0.0 0.29 10.9 0.0 1.5 1 0 0 1 1 1 0 Haem utilisation ChuX/HutX SAM_adeno_trans PF01887.16 gi|452209596|ref|YP_007489710.1| - 2.7e-80 269.2 0.1 3.1e-80 269.0 0.1 1.0 1 0 0 1 1 1 1 S-adenosyl-l-methionine hydroxide adenosyltransferase DUF1616 PF07760.11 gi|452209597|ref|YP_007489711.1| - 1.4e-25 90.3 0.0 1.7e-25 90.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) DUF4969 PF16339.5 gi|452209597|ref|YP_007489711.1| - 0.0023 18.3 0.1 0.0049 17.2 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4969) Fer4 PF00037.27 gi|452209598|ref|YP_007489712.1| - 0.017 14.9 1.7 0.017 14.9 1.7 3.0 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_16 PF13484.6 gi|452209598|ref|YP_007489712.1| - 0.042 14.8 5.0 0.13 13.2 5.0 1.8 1 1 0 1 1 1 0 4Fe-4S double cluster binding domain Fer4_7 PF12838.7 gi|452209598|ref|YP_007489712.1| - 0.085 13.5 4.2 0.2 12.3 4.2 1.5 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452209598|ref|YP_007489712.1| - 0.29 11.4 4.8 0.59 10.4 4.8 1.5 1 0 0 1 1 1 0 4Fe-4S dicluster domain Mss4 PF04421.13 gi|452209598|ref|YP_007489712.1| - 0.99 9.6 4.0 7.4 6.8 0.2 2.4 1 1 1 2 2 2 0 Mss4 protein DNA_binding_1 PF01035.20 gi|452209599|ref|YP_007489713.1| - 4.8e-33 113.1 0.0 6.9e-33 112.6 0.0 1.2 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain Methyltransf_1N PF02870.15 gi|452209599|ref|YP_007489713.1| - 9.2e-08 32.8 0.0 1.6e-07 32.0 0.0 1.4 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LolA_like PF17131.4 gi|452209602|ref|YP_007489716.1| - 1.4e-10 41.2 0.6 6.4e-10 39.1 0.5 2.0 1 1 1 2 2 2 1 Outer membrane lipoprotein-sorting protein DUF4367 PF14285.6 gi|452209602|ref|YP_007489716.1| - 2.7e-09 37.4 2.6 2.7e-09 37.4 2.6 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF4367) DUF1571 PF07608.11 gi|452209602|ref|YP_007489716.1| - 1.6e-06 27.8 0.2 5.2e-06 26.1 0.0 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF1571) DUF2092 PF09865.9 gi|452209602|ref|YP_007489716.1| - 0.0015 17.9 0.1 0.037 13.4 0.0 2.5 2 1 0 2 2 2 1 Predicted periplasmic protein (DUF2092) MucB_RseB PF03888.14 gi|452209602|ref|YP_007489716.1| - 0.0024 17.4 0.0 0.0044 16.6 0.0 1.4 1 0 0 1 1 1 1 MucB/RseB N-terminal domain DUF1329 PF07044.11 gi|452209602|ref|YP_007489716.1| - 0.019 14.3 0.0 0.034 13.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1329) ThiC_Rad_SAM PF01964.18 gi|452209603|ref|YP_007489717.1| - 3.1e-175 583.0 0.2 3.5e-175 582.8 0.2 1.0 1 0 0 1 1 1 1 Radical SAM ThiC family Glycos_transf_2 PF00535.26 gi|452209604|ref|YP_007489718.1| - 7.8e-15 55.1 0.0 1.1e-14 54.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|452209604|ref|YP_007489718.1| - 5.9e-06 26.3 0.0 9.3e-06 25.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|452209604|ref|YP_007489718.1| - 0.0031 18.0 0.0 0.0053 17.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 DsbD PF02683.15 gi|452209604|ref|YP_007489718.1| - 0.029 14.3 3.4 0.044 13.7 3.4 1.2 1 0 0 1 1 1 0 Cytochrome C biogenesis protein transmembrane region ArAE_2_N PF10337.9 gi|452209604|ref|YP_007489718.1| - 1.2 8.1 4.2 1.7 7.6 4.2 1.1 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal TBP PF00352.21 gi|452209605|ref|YP_007489719.1| - 1.7e-53 178.5 0.2 6.1e-26 90.2 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.8 gi|452209605|ref|YP_007489719.1| - 4.8e-08 33.0 0.0 0.0045 17.1 0.0 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) NdhS PF11623.8 gi|452209605|ref|YP_007489719.1| - 0.0056 16.3 0.0 1.1 8.9 0.0 2.4 2 0 0 2 2 2 2 NAD(P)H dehydrogenase subunit S RTT107_BRCT_5 PF16770.5 gi|452209605|ref|YP_007489719.1| - 0.021 14.7 0.1 0.037 13.9 0.1 1.3 1 0 0 1 1 1 0 Regulator of Ty1 transposition protein 107 BRCT domain TBP PF00352.21 gi|452209606|ref|YP_007489720.1| - 5.2e-55 183.4 0.2 1e-26 92.7 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.8 gi|452209606|ref|YP_007489720.1| - 4.2e-08 33.2 0.0 0.0045 17.1 0.0 2.4 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) NdhS PF11623.8 gi|452209606|ref|YP_007489720.1| - 0.0054 16.4 0.0 1.1 8.9 0.0 2.5 2 0 0 2 2 2 2 NAD(P)H dehydrogenase subunit S RTT107_BRCT_5 PF16770.5 gi|452209606|ref|YP_007489720.1| - 0.025 14.5 0.1 0.049 13.5 0.1 1.4 1 0 0 1 1 1 0 Regulator of Ty1 transposition protein 107 BRCT domain DUF218 PF02698.17 gi|452209606|ref|YP_007489720.1| - 0.081 12.9 0.0 13 5.8 0.0 2.2 1 1 1 2 2 2 0 DUF218 domain SMC_ScpB PF04079.16 gi|452209607|ref|YP_007489721.1| - 1.5e-37 128.7 0.0 3.8e-37 127.4 0.0 1.7 1 0 0 1 1 1 1 Segregation and condensation complex subunit ScpB HTH_20 PF12840.7 gi|452209607|ref|YP_007489721.1| - 0.014 15.5 0.0 2.2 8.4 0.0 2.7 2 0 0 2 2 2 0 Helix-turn-helix domain NitrOD5 PF11537.8 gi|452209607|ref|YP_007489721.1| - 0.073 13.2 0.1 0.43 10.7 0.0 2.2 2 0 0 2 2 2 0 Nitrosopumilus output domain 5 EnY2 PF10163.9 gi|452209607|ref|YP_007489721.1| - 0.079 13.3 1.9 0.6 10.5 0.0 3.2 4 1 1 5 5 5 0 Transcription factor e(y)2 HTH_27 PF13463.6 gi|452209607|ref|YP_007489721.1| - 0.13 12.7 0.0 3.5 8.2 0.0 2.9 2 0 0 2 2 2 0 Winged helix DNA-binding domain SMC_N PF02463.19 gi|452209608|ref|YP_007489722.1| - 5.7e-71 238.4 0.0 1.2e-70 237.4 0.0 1.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SMC_hinge PF06470.13 gi|452209608|ref|YP_007489722.1| - 2.1e-34 118.3 0.0 8.9e-34 116.3 0.0 2.2 1 0 0 1 1 1 1 SMC proteins Flexible Hinge Domain AAA_21 PF13304.6 gi|452209608|ref|YP_007489722.1| - 1.9e-09 37.8 13.2 6.4e-05 22.9 0.1 4.2 3 1 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|452209608|ref|YP_007489722.1| - 9.3e-08 32.2 20.7 9.3e-08 32.2 20.7 4.0 2 2 0 2 2 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|452209608|ref|YP_007489722.1| - 9.4e-07 28.5 0.0 2.2e-06 27.3 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain TolA_bind_tri PF16331.5 gi|452209608|ref|YP_007489722.1| - 0.0021 18.1 0.9 0.0021 18.1 0.9 8.4 6 1 2 8 8 8 2 TolA binding protein trimerisation AAA_23 PF13476.6 gi|452209608|ref|YP_007489722.1| - 0.075 13.5 114.0 0.013 16.1 54.9 6.8 2 2 1 3 3 1 0 AAA domain Urocanase PF01175.18 gi|452209608|ref|YP_007489722.1| - 1.7 8.2 4.8 7.7 6.1 1.3 3.3 2 1 0 2 2 2 0 Urocanase Rossmann-like domain GIT_CC PF16559.5 gi|452209608|ref|YP_007489722.1| - 2 8.4 12.7 0.25 11.2 3.4 4.0 3 1 0 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor ABC_tran PF00005.27 gi|452209608|ref|YP_007489722.1| - 2.3 8.7 0.0 2.3 8.7 0.0 5.2 3 2 0 3 3 2 0 ABC transporter HsbA PF12296.8 gi|452209608|ref|YP_007489722.1| - 3.6 8.0 6.2 2.2 8.7 0.1 3.7 3 1 0 3 3 3 0 Hydrophobic surface binding protein A Tektin PF03148.14 gi|452209609|ref|YP_007489723.1| - 0.00026 19.9 0.5 0.00037 19.4 0.5 1.2 1 0 0 1 1 1 1 Tektin family VASP_tetra PF08776.11 gi|452209609|ref|YP_007489723.1| - 0.0017 17.9 0.2 0.11 12.0 0.0 3.4 3 0 0 3 3 3 1 VASP tetramerisation domain Helo_like_N PF17111.5 gi|452209609|ref|YP_007489723.1| - 0.092 12.1 1.1 0.11 11.9 0.1 1.6 2 0 0 2 2 2 0 Fungal N-terminal domain of STAND proteins FeoB_N PF02421.18 gi|452209610|ref|YP_007489724.1| - 1.7e-55 186.9 0.3 2.7e-55 186.2 0.3 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B Gate PF07670.14 gi|452209610|ref|YP_007489724.1| - 2.8e-25 88.8 24.9 1e-13 51.5 7.4 3.0 3 0 0 3 3 3 2 Nucleoside recognition MMR_HSR1 PF01926.23 gi|452209610|ref|YP_007489724.1| - 2.2e-19 69.6 0.1 4e-19 68.8 0.1 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_C PF07664.12 gi|452209610|ref|YP_007489724.1| - 6.2e-16 57.8 0.5 6.2e-16 57.8 0.5 3.4 4 0 0 4 4 4 1 Ferrous iron transport protein B C terminus AIG1 PF04548.16 gi|452209610|ref|YP_007489724.1| - 0.00016 21.0 0.0 0.00026 20.4 0.0 1.2 1 0 0 1 1 1 1 AIG1 family Dynamin_N PF00350.23 gi|452209610|ref|YP_007489724.1| - 0.0045 17.1 1.4 0.046 13.8 0.1 2.2 1 1 1 2 2 2 1 Dynamin family ATP_bind_1 PF03029.17 gi|452209610|ref|YP_007489724.1| - 0.018 14.9 0.4 0.055 13.3 0.1 1.8 1 1 1 2 2 2 0 Conserved hypothetical ATP binding protein SRPRB PF09439.10 gi|452209610|ref|YP_007489724.1| - 0.045 13.2 0.0 0.076 12.5 0.0 1.3 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit Fe_dep_repr_C PF02742.15 gi|452209611|ref|YP_007489725.1| - 1.6e-28 98.6 0.3 5.7e-28 96.8 0.3 1.9 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain Fe_dep_repress PF01325.19 gi|452209611|ref|YP_007489725.1| - 1.1e-22 80.0 0.8 4.8e-22 77.9 0.5 2.2 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain FeoA PF04023.14 gi|452209611|ref|YP_007489725.1| - 2.2e-16 59.9 0.7 1.3e-14 54.2 0.3 2.4 2 1 0 2 2 2 1 FeoA domain HTH_24 PF13412.6 gi|452209611|ref|YP_007489725.1| - 1.1e-07 31.2 0.0 7.6e-07 28.6 0.0 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|452209611|ref|YP_007489725.1| - 2.3e-07 30.7 0.0 6.6e-07 29.2 0.0 1.7 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.12 gi|452209611|ref|YP_007489725.1| - 1.3e-06 28.2 0.0 4.1e-06 26.6 0.0 1.8 2 0 0 2 2 1 1 HTH domain TrmB PF01978.19 gi|452209611|ref|YP_007489725.1| - 2.4e-06 27.3 0.1 4.7e-06 26.4 0.1 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_12 PF08461.10 gi|452209611|ref|YP_007489725.1| - 4.4e-06 26.5 0.0 1.2e-05 25.1 0.0 1.8 1 1 0 1 1 1 1 Ribonuclease R winged-helix domain MarR_2 PF12802.7 gi|452209611|ref|YP_007489725.1| - 5e-06 26.3 0.0 1.1e-05 25.2 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|452209611|ref|YP_007489725.1| - 1.1e-05 25.9 0.0 2.3e-05 24.8 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_5 PF01022.20 gi|452209611|ref|YP_007489725.1| - 3.1e-05 23.8 0.0 5.4e-05 23.0 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HrcA_DNA-bdg PF03444.15 gi|452209611|ref|YP_007489725.1| - 0.00015 21.4 0.1 0.00031 20.3 0.1 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Rrf2 PF02082.20 gi|452209611|ref|YP_007489725.1| - 0.00016 21.9 0.1 0.00069 19.9 0.1 2.1 1 1 0 2 2 2 1 Transcriptional regulator LexA_DNA_bind PF01726.16 gi|452209611|ref|YP_007489725.1| - 0.00017 21.3 0.0 0.00041 20.1 0.0 1.6 1 0 0 1 1 1 1 LexA DNA binding domain HTH_6 PF01418.17 gi|452209611|ref|YP_007489725.1| - 0.00033 20.6 0.0 0.00073 19.5 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain, rpiR family DUF2250 PF10007.9 gi|452209611|ref|YP_007489725.1| - 0.00052 20.1 0.8 0.00094 19.3 0.8 1.5 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_IclR PF09339.10 gi|452209611|ref|YP_007489725.1| - 0.00057 19.6 0.0 0.001 18.8 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain GntR PF00392.21 gi|452209611|ref|YP_007489725.1| - 0.0031 17.1 0.0 0.0086 15.7 0.0 1.8 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_Crp_2 PF13545.6 gi|452209611|ref|YP_007489725.1| - 0.0051 16.7 0.1 0.019 14.9 0.0 2.0 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_micro PF17007.5 gi|452209611|ref|YP_007489725.1| - 0.015 14.1 0.1 0.02 13.8 0.1 1.1 1 0 0 1 1 1 0 HTH-like HTH_45 PF14947.6 gi|452209611|ref|YP_007489725.1| - 0.016 15.2 0.2 0.026 14.5 0.2 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DUF4423 PF14394.6 gi|452209611|ref|YP_007489725.1| - 0.025 14.3 0.1 0.04 13.6 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_AsnC-type PF13404.6 gi|452209611|ref|YP_007489725.1| - 0.032 14.1 0.0 0.079 12.8 0.0 1.7 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain IF2_N PF04760.15 gi|452209611|ref|YP_007489725.1| - 0.039 13.8 0.1 0.14 12.0 0.1 2.0 1 0 0 1 1 1 0 Translation initiation factor IF-2, N-terminal region FaeA PF04703.12 gi|452209611|ref|YP_007489725.1| - 0.059 13.8 0.0 0.12 12.8 0.0 1.5 1 0 0 1 1 1 0 FaeA-like protein TFIIE_alpha PF02002.17 gi|452209611|ref|YP_007489725.1| - 0.072 13.0 0.0 0.15 11.9 0.0 1.6 1 1 0 1 1 1 0 TFIIE alpha subunit HTH_10 PF04967.12 gi|452209611|ref|YP_007489725.1| - 0.076 12.8 0.0 0.21 11.4 0.0 1.7 2 0 0 2 2 1 0 HTH DNA binding domain DUF4093 PF13331.6 gi|452209611|ref|YP_007489725.1| - 0.092 13.2 0.1 5.8 7.4 0.0 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4093) Sigma70_r3 PF04539.16 gi|452209611|ref|YP_007489725.1| - 0.095 12.8 0.1 0.39 10.8 0.0 1.9 2 0 0 2 2 2 0 Sigma-70 region 3 AAA_assoc_C PF09821.9 gi|452209611|ref|YP_007489725.1| - 0.11 13.1 0.0 0.18 12.4 0.0 1.5 1 0 0 1 1 1 0 C-terminal AAA-associated domain FeoC PF09012.10 gi|452209611|ref|YP_007489725.1| - 0.15 12.2 0.0 0.29 11.2 0.0 1.5 1 0 0 1 1 1 0 FeoC like transcriptional regulator PRCH PF03967.13 gi|452209612|ref|YP_007489726.1| - 0.9 9.8 2.4 1 9.6 2.4 1.1 1 0 0 1 1 1 0 Photosynthetic reaction centre, H-chain N-terminal region Acetyltransf_1 PF00583.25 gi|452209613|ref|YP_007489727.1| - 3.8e-12 46.5 0.0 4e-12 46.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|452209613|ref|YP_007489727.1| - 5e-10 39.7 0.0 7e-10 39.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|452209613|ref|YP_007489727.1| - 5.9e-09 35.9 0.0 7.2e-09 35.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|452209613|ref|YP_007489727.1| - 0.00011 22.3 0.0 0.003 17.6 0.0 2.1 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|452209613|ref|YP_007489727.1| - 0.0013 18.9 0.0 0.0018 18.3 0.0 1.2 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_3 PF13302.7 gi|452209613|ref|YP_007489727.1| - 0.0024 18.5 0.0 0.0028 18.3 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|452209613|ref|YP_007489727.1| - 0.01 15.7 0.0 0.017 15.1 0.0 1.4 1 0 0 1 1 1 0 FR47-like protein Acetyltransf_4 PF13420.7 gi|452209613|ref|YP_007489727.1| - 0.011 15.9 0.0 0.021 15.0 0.0 1.4 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain BioY PF02632.14 gi|452209615|ref|YP_007489729.1| - 8.2e-40 136.0 19.5 1.3e-39 135.3 19.5 1.3 1 0 0 1 1 1 1 BioY family Carboxyl_trans PF01039.22 gi|452209615|ref|YP_007489729.1| - 0.036 12.7 0.7 0.045 12.4 0.7 1.1 1 0 0 1 1 1 0 Carboxyl transferase domain ABC_tran PF00005.27 gi|452209616|ref|YP_007489730.1| - 7.9e-28 97.7 0.0 1.2e-27 97.1 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|452209616|ref|YP_007489730.1| - 3.5e-10 40.2 0.1 4.8e-05 23.3 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|452209616|ref|YP_007489730.1| - 6.2e-10 38.9 0.4 1.8e-08 34.1 0.4 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|452209616|ref|YP_007489730.1| - 0.0036 17.6 0.1 0.14 12.4 0.1 2.8 2 1 0 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|452209616|ref|YP_007489730.1| - 0.01 15.5 0.2 0.021 14.6 0.2 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_15 PF13175.6 gi|452209616|ref|YP_007489730.1| - 0.015 15.0 0.1 0.14 11.8 0.1 2.0 2 0 0 2 2 2 0 AAA ATPase domain RecA PF00154.21 gi|452209616|ref|YP_007489730.1| - 0.019 14.5 0.2 3.9 6.8 0.0 2.4 1 1 1 2 2 2 0 recA bacterial DNA recombination protein AAA_24 PF13479.6 gi|452209616|ref|YP_007489730.1| - 0.042 13.6 0.3 0.2 11.4 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 gi|452209616|ref|YP_007489730.1| - 0.1 12.2 0.0 0.91 9.1 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 gi|452209616|ref|YP_007489730.1| - 0.14 12.7 0.5 7.5 7.1 0.1 2.7 2 1 1 3 3 3 0 AAA domain DUF126 PF01989.16 gi|452209616|ref|YP_007489730.1| - 0.15 11.9 0.1 0.98 9.3 0.1 2.2 2 0 0 2 2 2 0 Aconitase X swivel domain IstB_IS21 PF01695.17 gi|452209616|ref|YP_007489730.1| - 0.16 11.7 0.0 13 5.4 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_23 PF13476.6 gi|452209616|ref|YP_007489730.1| - 0.17 12.4 0.1 0.32 11.5 0.1 1.4 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 gi|452209617|ref|YP_007489731.1| - 9.5e-31 107.1 0.0 1.8e-30 106.2 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|452209617|ref|YP_007489731.1| - 1.9e-07 31.2 0.0 0.0003 20.7 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|452209617|ref|YP_007489731.1| - 1.3e-05 25.8 0.1 0.0002 21.9 0.1 2.1 1 1 0 1 1 1 1 AAA domain MeaB PF03308.16 gi|452209617|ref|YP_007489731.1| - 5e-05 22.4 0.0 9.5e-05 21.5 0.0 1.4 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_29 PF13555.6 gi|452209617|ref|YP_007489731.1| - 0.0018 17.9 0.0 0.0036 17.0 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|452209617|ref|YP_007489731.1| - 0.0022 18.4 0.0 0.0038 17.6 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|452209617|ref|YP_007489731.1| - 0.0029 17.9 0.0 0.0076 16.5 0.0 1.7 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|452209617|ref|YP_007489731.1| - 0.0098 15.3 0.0 0.097 12.1 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|452209617|ref|YP_007489731.1| - 0.079 12.9 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase CbiQ PF02361.16 gi|452209618|ref|YP_007489732.1| - 2.3e-35 122.2 9.8 3e-35 121.8 9.8 1.1 1 0 0 1 1 1 1 Cobalt transport protein HTH_5 PF01022.20 gi|452209619|ref|YP_007489733.1| - 1.5e-10 40.7 0.3 2.7e-10 40.0 0.3 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|452209619|ref|YP_007489733.1| - 6.1e-06 26.2 0.7 6.1e-06 26.2 0.7 1.5 2 0 0 2 2 2 1 Helix-turn-helix domain Arg_repressor PF01316.21 gi|452209619|ref|YP_007489733.1| - 6.5e-05 22.6 0.1 8.4e-05 22.2 0.1 1.2 1 0 0 1 1 1 1 Arginine repressor, DNA binding domain MarR_2 PF12802.7 gi|452209619|ref|YP_007489733.1| - 0.0029 17.4 0.5 0.0069 16.3 0.6 1.5 1 1 1 2 2 2 1 MarR family TrmB PF01978.19 gi|452209619|ref|YP_007489733.1| - 0.0097 15.8 0.0 0.012 15.4 0.0 1.1 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_1 PF00126.27 gi|452209619|ref|YP_007489733.1| - 0.012 15.6 0.2 0.032 14.2 0.2 1.8 1 1 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family ArsP_1 PF03773.13 gi|452209620|ref|YP_007489734.1| - 2.7e-52 177.8 2.8 3.6e-52 177.3 2.8 1.1 1 0 0 1 1 1 1 Predicted permease FeoB_associated PF12669.7 gi|452209620|ref|YP_007489734.1| - 8.1 6.9 16.8 3.9 7.9 1.2 4.6 4 0 0 4 4 4 0 FeoB-associated Cys-rich membrane protein PspC PF04024.12 gi|452209621|ref|YP_007489735.1| - 1.3e-22 79.3 0.8 1.7e-22 79.0 0.8 1.1 1 0 0 1 1 1 1 PspC domain Aminotran_4 PF01063.19 gi|452209623|ref|YP_007489737.1| - 3e-57 194.0 0.0 3.5e-57 193.8 0.0 1.0 1 0 0 1 1 1 1 Amino-transferase class IV Ig_J_chain PF15097.6 gi|452209623|ref|YP_007489737.1| - 0.033 14.1 0.0 0.057 13.3 0.0 1.3 1 0 0 1 1 1 0 Immunoglobulin J chain MoeA_N PF03453.17 gi|452209624|ref|YP_007489738.1| - 6.4e-46 156.0 0.8 1.1e-45 155.2 0.8 1.4 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) PBP_like PF12727.7 gi|452209624|ref|YP_007489738.1| - 6.9e-38 129.7 0.5 1.7e-37 128.5 0.0 1.8 2 0 0 2 2 2 1 PBP superfamily domain MoCF_biosynth PF00994.24 gi|452209624|ref|YP_007489738.1| - 2e-24 85.9 0.1 4.4e-24 84.8 0.0 1.7 2 0 0 2 2 2 1 Probable molybdopterin binding domain MoeA_C PF03454.15 gi|452209624|ref|YP_007489738.1| - 1.9e-14 53.6 0.0 1.2e-13 51.0 0.0 2.4 2 0 0 2 2 2 1 MoeA C-terminal region (domain IV) Phosphonate-bd PF12974.7 gi|452209624|ref|YP_007489738.1| - 0.032 13.8 0.0 0.058 13.0 0.0 1.5 1 0 0 1 1 1 0 ABC transporter, phosphonate, periplasmic substrate-binding protein T2SSE PF00437.20 gi|452209624|ref|YP_007489738.1| - 0.043 12.9 0.0 0.078 12.0 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein MMR_HSR1_Xtn PF16897.5 gi|452209625|ref|YP_007489739.1| - 1.1e-34 118.6 0.3 2e-34 117.8 0.3 1.4 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain MMR_HSR1 PF01926.23 gi|452209625|ref|YP_007489739.1| - 2.5e-20 72.6 0.1 4.7e-20 71.8 0.1 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase TGS PF02824.21 gi|452209625|ref|YP_007489739.1| - 6.3e-17 61.4 0.0 1.3e-16 60.3 0.0 1.6 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.18 gi|452209625|ref|YP_007489739.1| - 1e-11 44.6 0.1 3.1e-11 43.0 0.1 1.8 2 1 0 2 2 2 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 gi|452209625|ref|YP_007489739.1| - 8.8e-05 22.5 0.6 0.085 12.8 0.2 2.6 2 0 0 2 2 2 2 RsgA GTPase Dynamin_N PF00350.23 gi|452209625|ref|YP_007489739.1| - 0.0038 17.3 3.1 0.59 10.2 0.3 3.1 2 1 1 3 3 3 2 Dynamin family Phage_B PF02304.15 gi|452209625|ref|YP_007489739.1| - 0.0051 17.2 0.0 0.014 15.8 0.0 1.7 1 0 0 1 1 1 1 Scaffold protein B AIG1 PF04548.16 gi|452209625|ref|YP_007489739.1| - 0.033 13.5 0.6 0.051 12.9 0.0 1.6 2 0 0 2 2 2 0 AIG1 family MeaB PF03308.16 gi|452209625|ref|YP_007489739.1| - 0.083 11.9 0.4 0.54 9.2 0.5 2.0 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB SRPRB PF09439.10 gi|452209625|ref|YP_007489739.1| - 0.13 11.7 0.0 0.31 10.5 0.0 1.6 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit AAA_16 PF13191.6 gi|452209625|ref|YP_007489739.1| - 0.21 12.0 0.2 0.53 10.6 0.2 1.6 1 0 0 1 1 1 0 AAA ATPase domain FlxA PF14282.6 gi|452209625|ref|YP_007489739.1| - 0.49 10.4 4.1 3.5 7.7 4.7 1.9 1 1 1 2 2 2 0 FlxA-like protein DUF1192 PF06698.11 gi|452209625|ref|YP_007489739.1| - 0.59 10.2 4.6 0.24 11.5 0.3 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1192) Dala_Dala_lig_C PF07478.13 gi|452209626|ref|YP_007489740.1| - 2.4e-24 86.0 0.0 3.9e-24 85.3 0.0 1.3 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus Methyltransf_25 PF13649.6 gi|452209626|ref|YP_007489740.1| - 5.3e-23 81.5 0.0 5.2e-22 78.4 0.0 2.5 3 0 0 3 3 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|452209626|ref|YP_007489740.1| - 1.6e-18 67.1 0.0 4.1e-18 65.8 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|452209626|ref|YP_007489740.1| - 2.7e-17 63.0 0.0 4.6e-17 62.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|452209626|ref|YP_007489740.1| - 2.4e-14 53.3 0.0 3.7e-14 52.6 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|452209626|ref|YP_007489740.1| - 9.3e-11 41.8 0.0 2.4e-10 40.5 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|452209626|ref|YP_007489740.1| - 1.3e-07 32.2 0.0 2.2e-06 28.3 0.0 2.3 2 0 0 2 2 2 1 Methyltransferase domain TehB PF03848.14 gi|452209626|ref|YP_007489740.1| - 1.7e-05 24.3 0.0 2.8e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_2 PF00891.18 gi|452209626|ref|YP_007489740.1| - 0.00024 20.5 0.0 0.00041 19.7 0.0 1.3 1 0 0 1 1 1 1 O-methyltransferase domain MTS PF05175.14 gi|452209626|ref|YP_007489740.1| - 0.00062 19.4 0.0 0.0011 18.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain CMAS PF02353.20 gi|452209626|ref|YP_007489740.1| - 0.0015 17.9 0.0 0.0024 17.2 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase ATP-grasp_4 PF13535.6 gi|452209626|ref|YP_007489740.1| - 0.0033 17.0 0.0 0.038 13.6 0.0 2.2 2 0 0 2 2 2 1 ATP-grasp domain ATPgrasp_Ter PF15632.6 gi|452209626|ref|YP_007489740.1| - 0.0054 16.5 0.0 0.65 9.7 0.0 2.7 2 0 0 2 2 2 1 ATP-grasp in the biosynthetic pathway with Ter operon Pox_MCEL PF03291.16 gi|452209626|ref|YP_007489740.1| - 0.0083 15.3 0.0 0.074 12.1 0.0 2.0 1 1 0 1 1 1 1 mRNA capping enzyme ATP-grasp_3 PF02655.14 gi|452209626|ref|YP_007489740.1| - 0.035 14.1 0.0 0.095 12.7 0.0 1.7 1 1 0 1 1 1 0 ATP-grasp domain Methyltransf_4 PF02390.17 gi|452209626|ref|YP_007489740.1| - 0.086 12.3 0.0 0.54 9.7 0.0 2.2 2 0 0 2 2 2 0 Putative methyltransferase CheR PF01739.18 gi|452209626|ref|YP_007489740.1| - 0.17 11.3 0.0 0.34 10.4 0.0 1.4 1 0 0 1 1 1 0 CheR methyltransferase, SAM binding domain CitMHS PF03600.16 gi|452209628|ref|YP_007489742.1| - 1.4e-32 113.1 24.3 1.4e-32 113.1 24.3 2.1 1 1 1 2 2 2 1 Citrate transporter MC1 PF05854.11 gi|452209631|ref|YP_007489745.1| - 2.2e-39 133.6 1.1 2.5e-39 133.4 1.1 1.0 1 0 0 1 1 1 1 Non-histone chromosomal protein MC1 HicB_lk_antitox PF15919.5 gi|452209632|ref|YP_007489746.1| - 0.0029 17.7 0.0 0.0036 17.4 0.0 1.3 1 0 0 1 1 1 1 HicB_like antitoxin of bacterial toxin-antitoxin system PHD_like PF12910.7 gi|452209632|ref|YP_007489746.1| - 0.02 14.9 0.1 0.029 14.4 0.1 1.2 1 0 0 1 1 1 0 Antitoxin of toxin-antitoxin, RelE / RelB, TA system Humanin PF15040.6 gi|452209632|ref|YP_007489746.1| - 0.12 11.8 0.8 0.31 10.5 0.0 1.9 2 0 0 2 2 2 0 Humanin family PAS_3 PF08447.12 gi|452209634|ref|YP_007489748.1| - 5.5e-39 132.4 2.5 6.5e-18 64.8 0.2 3.2 3 0 0 3 3 3 2 PAS fold DUF2111 PF09884.9 gi|452209634|ref|YP_007489748.1| - 5.9e-32 109.6 0.3 4.3e-31 106.8 0.2 2.4 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2111) PAS_9 PF13426.7 gi|452209634|ref|YP_007489748.1| - 1.3e-12 47.8 2.4 2.5e-05 24.5 0.1 3.3 3 0 0 3 3 3 3 PAS domain GAF_2 PF13185.6 gi|452209634|ref|YP_007489748.1| - 1.4e-11 44.8 0.0 3.1e-09 37.3 0.0 2.6 2 0 0 2 2 2 1 GAF domain PAS PF00989.25 gi|452209634|ref|YP_007489748.1| - 1.1e-10 41.5 2.0 0.00026 21.0 0.1 3.0 3 0 0 3 3 3 2 PAS fold PAS_4 PF08448.10 gi|452209634|ref|YP_007489748.1| - 2.8e-09 37.2 0.1 0.0013 19.0 0.0 3.4 3 0 0 3 3 3 2 PAS fold PAS_11 PF14598.6 gi|452209634|ref|YP_007489748.1| - 4.5e-05 23.5 0.0 0.091 12.9 0.0 2.5 2 0 0 2 2 2 2 PAS domain GAF_3 PF13492.6 gi|452209634|ref|YP_007489748.1| - 0.00017 21.9 0.0 0.00039 20.8 0.0 1.6 1 0 0 1 1 1 1 GAF domain VanY PF02557.17 gi|452209634|ref|YP_007489748.1| - 0.0007 19.4 0.1 0.18 11.6 0.0 2.8 3 0 0 3 3 3 1 D-alanyl-D-alanine carboxypeptidase GAF PF01590.26 gi|452209634|ref|YP_007489748.1| - 0.0012 19.5 0.0 0.0073 16.9 0.0 2.2 2 0 0 2 2 2 1 GAF domain Melibiase_2_C PF17450.2 gi|452209634|ref|YP_007489748.1| - 0.035 14.3 0.0 11 6.3 0.0 2.7 2 0 0 2 2 2 0 Alpha galactosidase A C-terminal beta sandwich domain DUF3654 PF12376.8 gi|452209634|ref|YP_007489748.1| - 0.037 14.2 0.3 0.19 11.9 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3654) DUF3155 PF11352.8 gi|452209634|ref|YP_007489748.1| - 0.044 14.2 0.2 16 6.0 0.0 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF3155) NosD PF05048.13 gi|452209635|ref|YP_007489749.1| - 2.5e-80 269.2 88.6 3.8e-35 121.3 28.6 4.1 1 1 3 4 4 4 4 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|452209635|ref|YP_007489749.1| - 8.9e-50 168.6 94.1 8.8e-18 64.6 18.2 4.1 1 1 3 4 4 4 4 Right handed beta helix region Pectinesterase PF01095.19 gi|452209635|ref|YP_007489749.1| - 0.0058 15.4 0.4 0.017 13.9 0.1 1.9 2 0 0 2 2 2 1 Pectinesterase B12-binding PF02310.19 gi|452209636|ref|YP_007489750.1| - 4.7e-20 71.8 0.3 5.9e-20 71.5 0.3 1.1 1 0 0 1 1 1 1 B12 binding domain Peripla_BP_6 PF13458.6 gi|452209636|ref|YP_007489750.1| - 0.0021 17.8 0.3 0.0028 17.4 0.3 1.1 1 0 0 1 1 1 1 Periplasmic binding protein PTS_IIB PF02302.17 gi|452209636|ref|YP_007489750.1| - 0.039 14.6 1.2 1.2 9.9 0.1 2.2 1 1 1 2 2 2 0 PTS system, Lactose/Cellobiose specific IIB subunit CCP_MauG PF03150.14 gi|452209636|ref|YP_007489750.1| - 0.5 11.0 2.1 7.9 7.1 1.3 2.1 2 0 0 2 2 2 0 Di-haem cytochrome c peroxidase ABC2_membrane_3 PF12698.7 gi|452209638|ref|YP_007489752.1| - 4.2e-45 154.4 16.9 4.9e-45 154.2 16.9 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|452209638|ref|YP_007489752.1| - 3.1e-15 56.2 15.8 8.6e-15 54.8 15.8 1.6 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.24 gi|452209638|ref|YP_007489752.1| - 7.5e-07 28.8 19.7 7.5e-07 28.8 19.7 2.8 2 1 1 3 3 3 1 ABC-2 type transporter Git3 PF11710.8 gi|452209638|ref|YP_007489752.1| - 0.0013 18.6 6.0 0.1 12.4 4.2 2.3 2 0 0 2 2 2 2 G protein-coupled glucose receptor regulating Gpa2 ABC_tran PF00005.27 gi|452209639|ref|YP_007489753.1| - 3.2e-28 98.9 0.0 6e-28 98.1 0.0 1.4 1 0 0 1 1 1 1 ABC transporter DUF4162 PF13732.6 gi|452209639|ref|YP_007489753.1| - 2e-15 57.3 0.2 6.3e-15 55.7 0.2 1.9 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_21 PF13304.6 gi|452209639|ref|YP_007489753.1| - 1.7e-12 47.8 2.9 7.1e-07 29.3 0.2 2.4 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|452209639|ref|YP_007489753.1| - 0.00048 20.5 0.0 0.0011 19.4 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 gi|452209639|ref|YP_007489753.1| - 0.00073 20.1 0.2 0.00073 20.1 0.2 2.4 2 1 0 2 2 2 1 AAA domain AAA_30 PF13604.6 gi|452209639|ref|YP_007489753.1| - 0.0024 17.6 0.0 0.012 15.4 0.0 2.0 1 1 1 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|452209639|ref|YP_007489753.1| - 0.0026 18.0 0.3 0.011 16.1 0.2 2.0 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|452209639|ref|YP_007489753.1| - 0.003 17.5 1.6 0.018 14.9 0.0 2.6 3 0 0 3 3 3 1 RsgA GTPase AAA_13 PF13166.6 gi|452209639|ref|YP_007489753.1| - 0.0047 15.7 1.1 0.74 8.4 0.0 2.5 1 1 0 2 2 2 2 AAA domain SMC_N PF02463.19 gi|452209639|ref|YP_007489753.1| - 0.0096 15.4 0.2 1.2 8.5 0.0 2.3 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain ATPase_2 PF01637.18 gi|452209639|ref|YP_007489753.1| - 0.013 15.5 0.1 0.025 14.5 0.1 1.5 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea NTPase_1 PF03266.15 gi|452209639|ref|YP_007489753.1| - 0.016 15.1 0.4 0.26 11.2 0.0 2.4 2 1 1 3 3 3 0 NTPase AAA_29 PF13555.6 gi|452209639|ref|YP_007489753.1| - 0.027 14.2 0.0 0.053 13.3 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA PF00004.29 gi|452209639|ref|YP_007489753.1| - 0.044 14.2 0.5 0.18 12.2 0.4 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) SbcCD_C PF13558.6 gi|452209639|ref|YP_007489753.1| - 0.064 13.5 0.0 0.14 12.4 0.0 1.6 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit PIF1 PF05970.14 gi|452209639|ref|YP_007489753.1| - 0.065 12.4 0.1 0.28 10.3 0.0 1.9 2 0 0 2 2 2 0 PIF1-like helicase TsaE PF02367.17 gi|452209639|ref|YP_007489753.1| - 0.11 12.5 0.0 0.3 11.1 0.0 1.7 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_5 PF07728.14 gi|452209639|ref|YP_007489753.1| - 0.11 12.5 0.1 0.57 10.2 0.0 2.0 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) cobW PF02492.19 gi|452209639|ref|YP_007489753.1| - 0.14 11.8 0.7 0.36 10.4 0.1 2.0 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain DUF2205 PF10224.9 gi|452209639|ref|YP_007489753.1| - 5.7 7.0 6.6 3.1 7.8 0.1 2.8 3 0 0 3 3 3 0 Short coiled-coil protein RibD_C PF01872.17 gi|452209640|ref|YP_007489754.1| - 3.9e-14 52.9 0.0 9.3e-14 51.7 0.0 1.6 1 1 0 1 1 1 1 RibD C-terminal domain Proton_antipo_M PF00361.20 gi|452209641|ref|YP_007489755.1| - 1.6e-61 208.1 22.0 1.6e-61 208.1 22.0 2.7 2 2 0 2 2 2 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|452209641|ref|YP_007489755.1| - 0.0098 16.0 0.9 0.076 13.1 0.0 2.8 1 1 1 2 2 2 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DUF4267 PF14087.6 gi|452209641|ref|YP_007489755.1| - 0.37 10.9 5.5 0.26 11.3 0.1 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF4267) NADHdh PF00146.21 gi|452209642|ref|YP_007489756.1| - 3.4e-35 121.8 20.0 4.5e-35 121.4 20.0 1.0 1 0 0 1 1 1 1 NADH dehydrogenase Proton_antipo_M PF00361.20 gi|452209644|ref|YP_007489758.1| - 7e-49 166.6 27.5 7e-49 166.6 27.5 2.3 3 0 0 3 3 3 1 Proton-conducting membrane transporter Oxidored_q6 PF01058.22 gi|452209645|ref|YP_007489759.1| - 7.8e-22 77.5 0.0 1.1e-21 77.0 0.0 1.2 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit DUF1724 PF08350.10 gi|452209647|ref|YP_007489761.1| - 9.3e-15 54.5 0.8 2.3e-14 53.3 0.8 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_11 PF08279.12 gi|452209647|ref|YP_007489761.1| - 0.0013 18.6 0.1 0.0033 17.3 0.1 1.7 1 0 0 1 1 1 1 HTH domain HTH_5 PF01022.20 gi|452209647|ref|YP_007489761.1| - 0.0092 15.8 0.1 0.018 14.9 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.6 gi|452209647|ref|YP_007489761.1| - 0.023 14.7 0.1 0.056 13.4 0.1 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix JIP_LZII PF16471.5 gi|452209647|ref|YP_007489761.1| - 0.024 14.8 0.1 5.5 7.2 0.0 2.6 2 0 0 2 2 2 0 JNK-interacting protein leucine zipper II TrmB PF01978.19 gi|452209647|ref|YP_007489761.1| - 0.031 14.2 0.1 0.069 13.0 0.1 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.6 gi|452209647|ref|YP_007489761.1| - 0.041 14.4 0.0 0.084 13.4 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain Imm32 PF15566.6 gi|452209647|ref|YP_007489761.1| - 0.041 13.7 0.0 0.1 12.4 0.0 1.6 1 0 0 1 1 1 0 Immunity protein 32 HTH_20 PF12840.7 gi|452209647|ref|YP_007489761.1| - 0.1 12.6 0.0 0.23 11.5 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain QueF_N PF14819.6 gi|452209647|ref|YP_007489761.1| - 0.15 12.4 1.7 4.3 7.7 0.3 2.3 1 1 1 2 2 2 0 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term Response_reg PF00072.24 gi|452209648|ref|YP_007489762.1| - 4e-30 104.3 0.3 4.4e-30 104.1 0.3 1.0 1 0 0 1 1 1 1 Response regulator receiver domain FleQ PF06490.11 gi|452209648|ref|YP_007489762.1| - 0.14 12.5 0.0 0.18 12.2 0.0 1.1 1 0 0 1 1 1 0 Flagellar regulatory protein FleQ E1-E2_ATPase PF00122.20 gi|452209650|ref|YP_007489764.1| - 2.7e-50 170.4 0.1 2.7e-50 170.4 0.1 2.9 4 0 0 4 4 4 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 gi|452209650|ref|YP_007489764.1| - 1.6e-43 148.5 1.3 1.6e-43 148.5 1.3 2.3 2 1 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 gi|452209650|ref|YP_007489764.1| - 2.3e-23 83.6 0.5 1.8e-22 80.7 0.5 2.3 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 gi|452209650|ref|YP_007489764.1| - 9.7e-19 67.3 0.0 1.9e-18 66.3 0.0 1.5 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Cation_ATPase_N PF00690.26 gi|452209650|ref|YP_007489764.1| - 1.9e-18 65.9 0.5 5e-18 64.6 0.1 2.0 2 0 0 2 2 2 1 Cation transporter/ATPase, N-terminus Hydrolase_3 PF08282.12 gi|452209650|ref|YP_007489764.1| - 1.3e-09 38.2 1.7 1.2e-05 25.2 1.6 2.4 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|452209650|ref|YP_007489764.1| - 1.7e-05 25.3 0.0 3.4e-05 24.3 0.0 1.6 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase URO-D PF01208.17 gi|452209652|ref|YP_007489766.1| - 5.4e-87 292.2 0.0 6e-87 292.0 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) RACo_C_ter PF14574.6 gi|452209654|ref|YP_007489768.1| - 2.3e-69 233.3 5.1 2.9e-68 229.8 5.3 2.1 2 0 0 2 2 2 1 C-terminal domain of RACo the ASKHA domain Raco_middle PF17651.1 gi|452209654|ref|YP_007489768.1| - 2.2e-09 37.2 0.0 6.4e-09 35.7 0.0 1.8 1 0 0 1 1 1 1 RACo middle region Fer4_7 PF12838.7 gi|452209654|ref|YP_007489768.1| - 4.9e-06 27.0 22.9 0.00026 21.5 11.8 2.0 1 1 2 3 3 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452209654|ref|YP_007489768.1| - 2.8e-05 24.9 10.0 0.00053 20.9 2.4 2.8 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|452209654|ref|YP_007489768.1| - 4e-05 23.7 10.5 8.5e-05 22.6 10.5 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|452209654|ref|YP_007489768.1| - 5.7e-05 22.8 3.9 5.7e-05 22.8 3.9 2.7 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_21 PF14697.6 gi|452209654|ref|YP_007489768.1| - 7e-05 22.9 22.0 0.00041 20.4 2.3 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|452209654|ref|YP_007489768.1| - 0.00011 22.1 12.2 0.017 15.2 3.4 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|452209654|ref|YP_007489768.1| - 0.00033 21.0 2.7 0.0063 16.9 0.1 2.5 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|452209654|ref|YP_007489768.1| - 0.00036 21.0 4.9 0.0063 17.0 0.2 2.5 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452209654|ref|YP_007489768.1| - 0.0038 17.2 11.9 0.24 11.6 3.0 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|452209654|ref|YP_007489768.1| - 0.0047 17.0 13.2 0.022 14.9 13.5 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_11 PF13247.6 gi|452209654|ref|YP_007489768.1| - 0.0066 16.5 3.6 0.015 15.4 3.6 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain KH_7 PF17214.3 gi|452209654|ref|YP_007489768.1| - 0.076 13.0 0.0 0.3 11.1 0.0 1.9 2 0 0 2 2 2 0 KH domain Fer4_4 PF12800.7 gi|452209654|ref|YP_007489768.1| - 0.11 13.1 12.0 0.062 13.8 2.5 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain POTRA PF07244.15 gi|452209654|ref|YP_007489768.1| - 0.12 13.0 0.0 0.54 10.9 0.0 2.1 2 0 0 2 2 2 0 Surface antigen variable number repeat Fer4_3 PF12798.7 gi|452209654|ref|YP_007489768.1| - 0.28 12.2 18.4 0.59 11.2 7.0 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|452209654|ref|YP_007489768.1| - 6.7 7.0 9.7 26 5.0 9.7 1.8 1 1 0 1 1 1 0 4Fe-4S dicluster domain cobW PF02492.19 gi|452209656|ref|YP_007489770.1| - 3.9e-37 127.5 1.2 5.5e-37 127.0 1.2 1.2 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain SRP54 PF00448.22 gi|452209656|ref|YP_007489770.1| - 0.00025 20.7 2.5 0.00075 19.2 0.5 2.2 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain CbiA PF01656.23 gi|452209656|ref|YP_007489770.1| - 0.00051 20.1 2.8 0.0012 18.9 2.8 2.1 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|452209656|ref|YP_007489770.1| - 0.0014 18.6 1.2 0.0026 17.7 1.2 1.6 1 1 0 1 1 1 1 AAA domain MeaB PF03308.16 gi|452209656|ref|YP_007489770.1| - 0.0022 17.0 0.4 0.0045 16.0 0.4 1.5 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB KTI12 PF08433.10 gi|452209656|ref|YP_007489770.1| - 0.074 12.5 0.0 0.18 11.2 0.0 1.6 1 0 0 1 1 1 0 Chromatin associated protein KTI12 DUF2922 PF11148.8 gi|452209656|ref|YP_007489770.1| - 0.11 12.2 1.6 0.39 10.5 0.1 2.7 3 1 0 3 3 3 0 Protein of unknown function (DUF2922) Tim44 PF04280.15 gi|452209656|ref|YP_007489770.1| - 0.13 12.4 0.0 11 6.2 0.0 2.3 2 0 0 2 2 2 0 Tim44-like domain LpxK PF02606.14 gi|452209656|ref|YP_007489770.1| - 0.14 11.2 1.3 0.27 10.3 1.3 1.4 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase B12-binding PF02310.19 gi|452209658|ref|YP_007489772.1| - 5.5e-16 58.7 0.1 8.5e-16 58.1 0.1 1.3 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|452209658|ref|YP_007489772.1| - 1.3e-14 54.4 0.1 3.6e-14 52.9 0.1 1.8 2 0 0 2 2 2 1 B12 binding domain Gpr1_Fun34_YaaH PF01184.19 gi|452209659|ref|YP_007489773.1| - 8.4e-32 110.5 28.1 1.1e-31 110.1 28.1 1.0 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family Hydantoinase_A PF01968.18 gi|452209661|ref|YP_007489775.1| - 1.4e-33 116.4 0.8 7.3e-32 110.8 0.2 2.9 2 1 0 2 2 2 1 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 gi|452209661|ref|YP_007489775.1| - 1.1e-31 109.9 1.4 5.5e-27 94.6 0.2 3.5 2 1 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.6 gi|452209661|ref|YP_007489775.1| - 4.7e-06 25.5 0.9 0.035 12.7 0.0 2.1 2 0 0 2 2 2 2 MutL protein BcrAD_BadFG PF01869.20 gi|452209661|ref|YP_007489775.1| - 0.0026 17.3 0.9 0.31 10.5 0.0 2.9 3 1 0 4 4 4 1 BadF/BadG/BcrA/BcrD ATPase family ROK PF00480.20 gi|452209661|ref|YP_007489775.1| - 0.035 13.6 0.2 0.12 11.8 0.0 2.0 3 0 0 3 3 3 0 ROK family FtsA PF14450.6 gi|452209661|ref|YP_007489775.1| - 0.073 13.5 0.3 3.6 8.0 0.1 2.7 2 0 0 2 2 2 0 Cell division protein FtsA StbA PF06406.11 gi|452209661|ref|YP_007489775.1| - 0.14 11.4 0.1 0.29 10.3 0.1 1.4 1 0 0 1 1 1 0 StbA protein DUF1724 PF08350.10 gi|452209663|ref|YP_007489777.1| - 5.5e-21 74.5 0.0 9.9e-21 73.6 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_45 PF14947.6 gi|452209663|ref|YP_007489777.1| - 0.0022 18.0 0.6 0.011 15.8 0.1 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix SurA_N_3 PF13624.6 gi|452209663|ref|YP_007489777.1| - 0.0066 16.3 0.3 0.023 14.5 0.1 1.8 2 0 0 2 2 2 1 SurA N-terminal domain MarR PF01047.22 gi|452209663|ref|YP_007489777.1| - 0.0096 15.8 0.4 0.089 12.7 0.1 2.3 2 0 0 2 2 2 1 MarR family TrmB PF01978.19 gi|452209663|ref|YP_007489777.1| - 0.0098 15.8 0.0 0.021 14.7 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.12 gi|452209663|ref|YP_007489777.1| - 0.076 13.0 1.6 0.2 11.6 0.6 2.2 2 0 0 2 2 2 0 HTH domain HTH_5 PF01022.20 gi|452209663|ref|YP_007489777.1| - 0.12 12.3 0.1 0.27 11.1 0.1 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HemN_C PF06969.16 gi|452209663|ref|YP_007489777.1| - 0.14 12.3 0.0 5 7.3 0.0 2.6 2 0 0 2 2 2 0 HemN C-terminal domain DUF1724 PF08350.10 gi|452209664|ref|YP_007489778.1| - 4.8e-24 84.3 0.9 2.1e-23 82.2 0.3 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|452209664|ref|YP_007489778.1| - 0.00078 19.3 0.4 0.0015 18.3 0.4 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|452209664|ref|YP_007489778.1| - 0.025 14.6 0.0 0.04 14.0 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_27 PF13463.6 gi|452209664|ref|YP_007489778.1| - 0.084 13.4 0.1 0.15 12.6 0.1 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain Cupredoxin_1 PF13473.6 gi|452209665|ref|YP_007489779.1| - 0.034 14.2 0.0 0.068 13.3 0.0 1.6 1 1 0 1 1 1 0 Cupredoxin-like domain DUF4969 PF16339.5 gi|452209665|ref|YP_007489779.1| - 0.072 13.5 0.0 0.11 12.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4969) MMR_HSR1_C PF08438.10 gi|452209666|ref|YP_007489780.1| - 8.6e-34 116.5 0.0 1.5e-33 115.7 0.0 1.4 1 0 0 1 1 1 1 GTPase of unknown function C-terminal MMR_HSR1 PF01926.23 gi|452209666|ref|YP_007489780.1| - 3e-19 69.2 0.1 2.9e-18 66.0 0.0 2.4 3 1 0 3 3 3 1 50S ribosome-binding GTPase TGS PF02824.21 gi|452209666|ref|YP_007489780.1| - 1.2e-13 50.9 0.0 2.7e-13 49.7 0.0 1.6 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.18 gi|452209666|ref|YP_007489780.1| - 4.9e-09 35.9 0.9 5.1e-07 29.3 0.1 2.8 3 0 0 3 3 3 2 Ferrous iron transport protein B MMR_HSR1_Xtn PF16897.5 gi|452209666|ref|YP_007489780.1| - 0.037 14.0 0.0 0.072 13.1 0.0 1.5 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain Prenyltransf PF01255.19 gi|452209667|ref|YP_007489781.1| - 7.4e-27 94.3 0.0 3.1e-26 92.3 0.0 1.8 1 1 1 2 2 2 1 Putative undecaprenyl diphosphate synthase DUF1922 PF09082.10 gi|452209668|ref|YP_007489782.1| - 0.0011 19.2 1.1 0.0031 17.8 0.4 2.1 2 1 1 3 3 3 1 Domain of unknown function (DUF1922) TF_Zn_Ribbon PF08271.12 gi|452209668|ref|YP_007489782.1| - 0.0045 16.5 0.0 0.011 15.2 0.0 1.7 1 0 0 1 1 1 1 TFIIB zinc-binding Ribosomal_S27e PF01667.17 gi|452209668|ref|YP_007489782.1| - 0.006 16.3 1.2 0.006 16.3 1.2 1.6 2 0 0 2 2 2 1 Ribosomal protein S27 Zn_Tnp_IS1595 PF12760.7 gi|452209668|ref|YP_007489782.1| - 0.0084 16.1 2.2 0.017 15.1 2.2 1.5 1 0 0 1 1 1 1 Transposase zinc-ribbon domain zinc_ribbon_10 PF10058.9 gi|452209668|ref|YP_007489782.1| - 0.036 13.8 0.4 0.067 12.9 0.4 1.5 1 0 0 1 1 1 0 Predicted integral membrane zinc-ribbon metal-binding protein Ogr_Delta PF04606.12 gi|452209668|ref|YP_007489782.1| - 0.049 13.6 1.0 4.7 7.3 0.2 2.4 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger HypA PF01155.19 gi|452209668|ref|YP_007489782.1| - 0.06 13.4 0.8 0.13 12.3 0.8 1.5 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-C4_Topoisom PF01396.19 gi|452209668|ref|YP_007489782.1| - 0.06 13.1 1.4 5.8 6.8 0.1 2.4 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger OrfB_Zn_ribbon PF07282.11 gi|452209668|ref|YP_007489782.1| - 0.06 13.3 1.1 0.16 11.9 1.1 1.7 1 0 0 1 1 1 0 Putative transposase DNA-binding domain C1_1 PF00130.22 gi|452209668|ref|YP_007489782.1| - 0.071 13.0 1.8 0.13 12.1 1.8 1.3 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-ribbon_3 PF13248.6 gi|452209668|ref|YP_007489782.1| - 0.23 10.9 1.5 22 4.7 0.0 3.1 3 0 0 3 3 3 0 zinc-ribbon domain DUF1451 PF07295.11 gi|452209668|ref|YP_007489782.1| - 0.42 10.6 3.2 0.33 11.0 1.4 1.7 2 0 0 2 2 2 0 Zinc-ribbon containing domain zinc_ribbon_4 PF13717.6 gi|452209668|ref|YP_007489782.1| - 0.7 9.9 6.6 4.9 7.2 6.7 2.2 1 1 1 2 2 2 0 zinc-ribbon domain zf-TFIIB PF13453.6 gi|452209668|ref|YP_007489782.1| - 0.82 9.1 3.4 1.7 8.1 3.4 1.5 1 0 0 1 1 1 0 Transcription factor zinc-finger zf-ACC PF17848.1 gi|452209668|ref|YP_007489782.1| - 1.2 9.3 0.1 1.2 9.3 0.1 2.8 3 0 0 3 3 2 0 Acetyl-coA carboxylase zinc finger domain zinc_ribbon_2 PF13240.6 gi|452209668|ref|YP_007489782.1| - 1.5 8.6 4.2 18 5.2 0.1 2.8 3 0 0 3 3 3 0 zinc-ribbon domain eIF-5_eIF-2B PF01873.17 gi|452209668|ref|YP_007489782.1| - 2.4 8.0 5.3 1 9.2 1.6 2.0 2 0 0 2 2 2 0 Domain found in IF2B/IF5 CxC4 PF18717.1 gi|452209669|ref|YP_007489783.1| - 0.0059 16.5 0.0 0.006 16.4 0.0 1.0 1 0 0 1 1 1 1 CxC4 like cysteine cluster associated with KDZ transposases NRD1_2 PF01995.16 gi|452209670|ref|YP_007489784.1| - 2.1e-94 315.3 0.5 2.8e-94 314.9 0.5 1.2 1 0 0 1 1 1 1 NrpR regulatory domains NRD1 and 2 HTH_12 PF08461.10 gi|452209670|ref|YP_007489784.1| - 4e-32 110.0 0.8 8.9e-32 108.8 0.8 1.6 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain HTH_21 PF13276.6 gi|452209670|ref|YP_007489784.1| - 0.014 15.5 0.6 0.024 14.8 0.6 1.4 1 0 0 1 1 1 0 HTH-like domain HTH_20 PF12840.7 gi|452209670|ref|YP_007489784.1| - 0.13 12.4 0.0 0.35 11.0 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain Lactamase_B PF00753.27 gi|452209671|ref|YP_007489785.1| - 2.5e-13 50.5 0.0 3.6e-13 50.0 0.0 1.4 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|452209671|ref|YP_007489785.1| - 8e-09 35.3 0.0 9.2e-09 35.1 0.0 1.3 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 gi|452209671|ref|YP_007489785.1| - 0.0074 15.7 0.0 0.012 15.1 0.0 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain ABC_tran PF00005.27 gi|452209672|ref|YP_007489786.1| - 2.6e-21 76.6 0.0 6.7e-21 75.2 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|452209672|ref|YP_007489786.1| - 9e-08 32.3 0.0 0.00056 19.8 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|452209672|ref|YP_007489786.1| - 1.9e-05 24.2 0.1 0.0024 17.4 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|452209672|ref|YP_007489786.1| - 0.0015 19.1 0.1 0.0032 18.0 0.0 1.5 2 0 0 2 2 2 1 AAA domain AAA_27 PF13514.6 gi|452209672|ref|YP_007489786.1| - 0.004 16.8 0.0 0.0063 16.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|452209672|ref|YP_007489786.1| - 0.011 15.5 0.4 0.023 14.4 0.0 1.7 2 0 0 2 2 2 0 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|452209672|ref|YP_007489786.1| - 0.019 14.9 0.0 0.035 14.0 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_13 PF13166.6 gi|452209672|ref|YP_007489786.1| - 0.038 12.6 0.1 0.051 12.2 0.1 1.1 1 0 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 gi|452209672|ref|YP_007489786.1| - 0.068 13.1 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_15 PF13175.6 gi|452209672|ref|YP_007489786.1| - 0.083 12.6 0.0 0.18 11.5 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain EF-hand_10 PF14788.6 gi|452209672|ref|YP_007489786.1| - 0.16 11.9 0.0 0.72 9.8 0.0 2.0 2 0 0 2 2 2 0 EF hand UPF0051 PF01458.17 gi|452209673|ref|YP_007489787.1| - 1.4e-54 185.1 0.0 2.1e-54 184.5 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) ATPase PF06745.13 gi|452209675|ref|YP_007489789.1| - 4.8e-84 281.3 4.1 3.2e-41 141.2 0.1 2.7 3 0 0 3 3 3 2 KaiC AAA_25 PF13481.6 gi|452209675|ref|YP_007489789.1| - 1.1e-07 31.6 0.0 1.2e-06 28.3 0.0 2.3 2 0 0 2 2 2 1 AAA domain DnaB_C PF03796.15 gi|452209675|ref|YP_007489789.1| - 6.2e-07 29.0 0.2 2e-06 27.4 0.0 2.0 3 0 0 3 3 2 1 DnaB-like helicase C terminal domain GvpD PF07088.11 gi|452209675|ref|YP_007489789.1| - 8.6e-05 21.3 0.0 0.21 10.2 0.0 2.2 2 0 0 2 2 2 2 GvpD gas vesicle protein MEDS PF14417.6 gi|452209675|ref|YP_007489789.1| - 9.7e-05 22.2 0.0 0.00032 20.6 0.0 1.8 2 0 0 2 2 1 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain AAA_16 PF13191.6 gi|452209675|ref|YP_007489789.1| - 0.00011 22.6 0.5 0.0009 19.7 0.0 2.5 3 0 0 3 3 3 1 AAA ATPase domain RecA PF00154.21 gi|452209675|ref|YP_007489789.1| - 0.00016 21.3 0.0 0.00029 20.4 0.0 1.4 1 0 0 1 1 1 1 recA bacterial DNA recombination protein NACHT PF05729.12 gi|452209675|ref|YP_007489789.1| - 0.0022 17.9 0.0 0.0046 16.9 0.0 1.7 1 0 0 1 1 1 1 NACHT domain IstB_IS21 PF01695.17 gi|452209675|ref|YP_007489789.1| - 0.0025 17.6 0.0 0.0065 16.2 0.0 1.6 1 0 0 1 1 1 1 IstB-like ATP binding protein PAXNEB PF05625.11 gi|452209675|ref|YP_007489789.1| - 0.0032 16.7 0.0 0.02 14.1 0.0 2.1 2 0 0 2 2 2 1 PAXNEB protein AAA_14 PF13173.6 gi|452209675|ref|YP_007489789.1| - 0.0053 16.8 0.0 0.03 14.4 0.0 2.3 1 1 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|452209675|ref|YP_007489789.1| - 0.006 16.3 0.0 0.02 14.6 0.0 2.0 1 0 0 1 1 1 1 AAA domain CobU PF02283.16 gi|452209675|ref|YP_007489789.1| - 0.019 14.5 0.0 0.15 11.7 0.0 2.3 2 0 0 2 2 2 0 Cobinamide kinase / cobinamide phosphate guanyltransferase Helo_like_N PF17111.5 gi|452209675|ref|YP_007489789.1| - 0.025 13.9 0.5 0.056 12.8 0.5 1.5 1 0 0 1 1 1 0 Fungal N-terminal domain of STAND proteins Rad51 PF08423.11 gi|452209675|ref|YP_007489789.1| - 0.043 13.1 0.1 0.095 11.9 0.1 1.5 1 0 0 1 1 1 0 Rad51 SlyX PF04102.12 gi|452209675|ref|YP_007489789.1| - 0.049 14.3 4.1 0.47 11.1 2.1 2.8 2 1 0 2 2 2 0 SlyX AAA_22 PF13401.6 gi|452209675|ref|YP_007489789.1| - 0.049 13.9 0.0 0.22 11.8 0.0 2.2 1 1 0 1 1 1 0 AAA domain FrhB_FdhB_N PF04422.13 gi|452209675|ref|YP_007489789.1| - 0.055 13.6 0.0 0.12 12.5 0.0 1.5 1 0 0 1 1 1 0 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term FliD_C PF07195.12 gi|452209675|ref|YP_007489789.1| - 0.056 12.9 2.6 0.38 10.1 2.6 2.1 1 1 0 1 1 1 0 Flagellar hook-associated protein 2 C-terminus AAA_32 PF13654.6 gi|452209675|ref|YP_007489789.1| - 0.057 12.2 1.1 0.72 8.6 0.7 2.1 2 0 0 2 2 2 0 AAA domain TrwB_AAD_bind PF10412.9 gi|452209675|ref|YP_007489789.1| - 0.072 12.0 0.0 0.18 10.7 0.0 1.6 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain GAS PF13851.6 gi|452209675|ref|YP_007489789.1| - 0.075 12.4 5.5 0.15 11.4 5.5 1.4 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding AAA PF00004.29 gi|452209675|ref|YP_007489789.1| - 0.075 13.5 0.1 0.4 11.1 0.0 2.3 2 1 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) G-alpha PF00503.20 gi|452209675|ref|YP_007489789.1| - 0.098 11.8 0.0 0.21 10.7 0.0 1.6 1 1 0 1 1 1 0 G-protein alpha subunit Sigma54_activat PF00158.26 gi|452209675|ref|YP_007489789.1| - 0.11 12.2 0.0 0.34 10.6 0.0 1.8 2 0 0 2 2 2 0 Sigma-54 interaction domain TsaE PF02367.17 gi|452209675|ref|YP_007489789.1| - 0.12 12.4 0.0 0.38 10.8 0.0 1.8 2 0 0 2 2 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE CbiA PF01656.23 gi|452209675|ref|YP_007489789.1| - 0.13 12.3 0.3 1.3 9.1 0.0 2.5 3 1 0 3 3 3 0 CobQ/CobB/MinD/ParA nucleotide binding domain ATP-synt_ab PF00006.25 gi|452209675|ref|YP_007489789.1| - 0.15 11.7 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain CLZ PF16526.5 gi|452209675|ref|YP_007489789.1| - 0.2 12.0 6.6 0.32 11.4 5.1 2.0 2 0 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels AAA_23 PF13476.6 gi|452209675|ref|YP_007489789.1| - 0.28 11.7 3.6 5.3 7.5 0.6 2.3 2 0 0 2 2 2 0 AAA domain DUF4407 PF14362.6 gi|452209675|ref|YP_007489789.1| - 0.63 9.3 5.4 0.97 8.7 5.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF3450 PF11932.8 gi|452209675|ref|YP_007489789.1| - 6.5 6.0 9.1 5 6.4 7.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) GrpE PF01025.19 gi|452209675|ref|YP_007489789.1| - 7.2 6.3 7.9 4.1 7.0 4.2 2.4 3 1 0 3 3 3 0 GrpE KaiB PF07689.12 gi|452209676|ref|YP_007489790.1| - 6.4e-26 89.9 0.0 9.5e-26 89.4 0.0 1.3 1 0 0 1 1 1 1 KaiB domain KaiB PF07689.12 gi|452209677|ref|YP_007489791.1| - 6.6e-21 73.8 0.0 8.6e-21 73.5 0.0 1.2 1 0 0 1 1 1 1 KaiB domain PAS_9 PF13426.7 gi|452209678|ref|YP_007489792.1| - 1.9e-09 37.7 0.0 3.8e-09 36.7 0.0 1.5 2 0 0 2 2 2 1 PAS domain PAS PF00989.25 gi|452209678|ref|YP_007489792.1| - 2.3e-09 37.2 0.0 4.4e-09 36.3 0.0 1.4 2 0 0 2 2 2 1 PAS fold PAS_8 PF13188.7 gi|452209678|ref|YP_007489792.1| - 6.5e-05 22.9 0.0 0.00011 22.1 0.0 1.4 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.10 gi|452209678|ref|YP_007489792.1| - 0.0013 19.0 0.0 0.0034 17.6 0.0 1.6 2 0 0 2 2 2 1 PAS fold PAS_7 PF12860.7 gi|452209678|ref|YP_007489792.1| - 0.013 15.6 0.0 0.021 15.0 0.0 1.4 1 0 0 1 1 1 0 PAS fold PAS_3 PF08447.12 gi|452209678|ref|YP_007489792.1| - 0.064 13.6 0.0 0.12 12.7 0.0 1.5 1 0 0 1 1 1 0 PAS fold LysR_substrate PF03466.20 gi|452209678|ref|YP_007489792.1| - 0.081 12.3 0.2 0.1 11.9 0.2 1.1 1 0 0 1 1 1 0 LysR substrate binding domain PAS_11 PF14598.6 gi|452209678|ref|YP_007489792.1| - 0.15 12.2 0.0 0.23 11.6 0.0 1.3 1 0 0 1 1 1 0 PAS domain HisKA_2 PF07568.12 gi|452209679|ref|YP_007489793.1| - 2.3e-32 110.9 0.7 6.5e-32 109.5 0.7 1.8 1 0 0 1 1 1 1 Histidine kinase PAS_3 PF08447.12 gi|452209679|ref|YP_007489793.1| - 2.4e-20 72.6 0.0 4.9e-20 71.6 0.0 1.5 1 0 0 1 1 1 1 PAS fold HATPase_c PF02518.26 gi|452209679|ref|YP_007489793.1| - 8.5e-08 32.7 0.1 3.1e-07 30.9 0.1 1.9 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|452209679|ref|YP_007489793.1| - 0.00025 21.0 0.0 0.00054 19.9 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HWE_HK PF07536.14 gi|452209679|ref|YP_007489793.1| - 0.00028 21.5 0.2 0.00069 20.3 0.2 1.7 1 0 0 1 1 1 1 HWE histidine kinase PAS_9 PF13426.7 gi|452209679|ref|YP_007489793.1| - 0.0011 19.2 0.3 0.0034 17.6 0.1 1.9 2 0 0 2 2 2 1 PAS domain PAS_4 PF08448.10 gi|452209679|ref|YP_007489793.1| - 0.0035 17.6 0.0 0.011 15.9 0.0 1.9 2 0 0 2 2 2 1 PAS fold PAS PF00989.25 gi|452209679|ref|YP_007489793.1| - 0.011 15.7 0.0 0.033 14.2 0.0 1.8 2 0 0 2 2 2 0 PAS fold COP23 PF14218.6 gi|452209679|ref|YP_007489793.1| - 0.15 11.8 0.0 0.26 11.1 0.0 1.5 1 0 0 1 1 1 0 Circadian oscillating protein COP23 BON PF04972.17 gi|452209679|ref|YP_007489793.1| - 0.16 12.3 0.4 0.42 11.0 0.1 1.9 2 0 0 2 2 2 0 BON domain Oxidored_q3 PF00499.20 gi|452209680|ref|YP_007489794.1| - 0.0096 15.6 5.0 0.01 15.5 5.0 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NEMP PF10225.9 gi|452209680|ref|YP_007489794.1| - 0.15 11.7 1.7 0.17 11.5 1.7 1.1 1 0 0 1 1 1 0 NEMP family DUF202 PF02656.15 gi|452209680|ref|YP_007489794.1| - 0.64 10.5 4.7 0.81 10.2 4.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF202) PsbH PF00737.20 gi|452209680|ref|YP_007489794.1| - 1.5 8.6 7.2 0.33 10.7 1.6 2.1 2 0 0 2 2 2 0 Photosystem II 10 kDa phosphoprotein TrmB PF01978.19 gi|452209681|ref|YP_007489795.1| - 6.5e-05 22.7 0.0 0.0001 22.1 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_36 PF13730.6 gi|452209681|ref|YP_007489795.1| - 0.00083 19.3 0.6 0.0048 16.8 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain MarR PF01047.22 gi|452209681|ref|YP_007489795.1| - 0.0012 18.7 0.3 0.0019 18.1 0.1 1.6 2 0 0 2 2 2 1 MarR family Fe_dep_repress PF01325.19 gi|452209681|ref|YP_007489795.1| - 0.0014 18.8 0.5 0.003 17.7 0.1 1.8 1 1 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_24 PF13412.6 gi|452209681|ref|YP_007489795.1| - 0.0031 17.0 0.0 0.0048 16.4 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Penicillinase_R PF03965.16 gi|452209681|ref|YP_007489795.1| - 0.0036 17.6 0.2 0.0057 17.0 0.2 1.4 1 1 0 1 1 1 1 Penicillinase repressor MarR_2 PF12802.7 gi|452209681|ref|YP_007489795.1| - 0.0049 16.7 0.0 0.0074 16.2 0.0 1.3 1 0 0 1 1 1 1 MarR family DUF1122 PF06557.11 gi|452209681|ref|YP_007489795.1| - 0.0057 16.1 0.1 0.0065 15.9 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1122) Rio2_N PF09202.11 gi|452209681|ref|YP_007489795.1| - 0.0097 16.1 0.1 0.014 15.6 0.1 1.4 1 0 0 1 1 1 1 Rio2, N-terminal CmlA_N PF18456.1 gi|452209681|ref|YP_007489795.1| - 0.03 13.6 0.0 2 7.7 0.0 2.0 1 1 0 2 2 2 0 Diiron non-heme beta-hydroxylase N-terminal domain Cullin_Nedd8 PF10557.9 gi|452209681|ref|YP_007489795.1| - 0.038 14.0 1.1 0.065 13.3 0.2 1.8 2 0 0 2 2 2 0 Cullin protein neddylation domain TFIIE_alpha PF02002.17 gi|452209681|ref|YP_007489795.1| - 0.041 13.7 2.4 0.057 13.3 1.6 1.5 1 1 1 2 2 2 0 TFIIE alpha subunit HTH_27 PF13463.6 gi|452209681|ref|YP_007489795.1| - 0.14 12.6 0.0 0.21 12.1 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain Fer4_5 PF12801.7 gi|452209682|ref|YP_007489796.1| - 6.3e-15 54.9 18.3 7.6e-11 41.8 0.8 3.5 4 1 0 4 4 4 2 4Fe-4S binding domain Fer4 PF00037.27 gi|452209682|ref|YP_007489796.1| - 3.8e-09 36.0 13.0 5.2e-06 26.0 2.7 3.8 5 0 0 5 5 5 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|452209682|ref|YP_007489796.1| - 2.8e-08 33.8 17.5 0.00016 21.8 4.2 3.0 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|452209682|ref|YP_007489796.1| - 3e-07 30.9 17.7 0.0026 18.3 1.8 3.3 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|452209682|ref|YP_007489796.1| - 5e-07 29.5 22.1 0.00044 20.2 5.2 2.8 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|452209682|ref|YP_007489796.1| - 3.2e-06 27.2 17.6 7.8e-05 22.7 3.3 2.7 2 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|452209682|ref|YP_007489796.1| - 3.4e-06 27.2 10.3 7.2e-06 26.2 10.3 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452209682|ref|YP_007489796.1| - 1.3e-05 25.0 12.5 0.00012 22.0 1.0 3.2 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|452209682|ref|YP_007489796.1| - 7.3e-05 22.8 23.8 0.00015 21.8 19.7 3.0 2 1 1 3 3 3 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|452209682|ref|YP_007489796.1| - 8e-05 22.9 26.9 0.0024 18.2 5.8 3.5 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|452209682|ref|YP_007489796.1| - 0.00017 22.1 17.9 0.04 14.4 7.2 3.1 3 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452209682|ref|YP_007489796.1| - 0.00026 21.9 18.9 0.0057 17.6 2.0 3.1 3 1 1 4 4 4 3 4Fe-4S double cluster binding domain Fer4_8 PF13183.6 gi|452209682|ref|YP_007489796.1| - 0.0014 19.0 15.9 0.076 13.5 4.2 2.7 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|452209682|ref|YP_007489796.1| - 0.0084 16.9 11.6 0.21 12.4 0.8 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|452209682|ref|YP_007489796.1| - 0.0097 16.8 3.2 0.0097 16.8 3.2 4.3 5 0 0 5 5 4 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|452209682|ref|YP_007489796.1| - 0.079 13.5 17.7 0.28 11.7 2.6 2.8 3 0 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Cpn60_TCP1 PF00118.24 gi|452209683|ref|YP_007489797.1| - 1.7e-178 594.3 19.9 2.1e-178 594.0 19.9 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family DUF473 PF04322.12 gi|452209684|ref|YP_007489798.1| - 7.5e-42 141.9 0.3 8.4e-42 141.7 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF473) PAC2 PF09754.9 gi|452209685|ref|YP_007489799.1| - 8e-51 173.1 0.2 9e-51 172.9 0.2 1.0 1 0 0 1 1 1 1 PAC2 family DUF2536 PF10750.9 gi|452209685|ref|YP_007489799.1| - 0.071 13.0 0.2 6.5 6.7 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2536) PK_C PF02887.16 gi|452209686|ref|YP_007489800.1| - 2e-17 63.5 0.4 2.5e-17 63.2 0.4 1.1 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain Asp_Glu_race PF01177.22 gi|452209686|ref|YP_007489800.1| - 0.011 15.6 0.0 0.013 15.3 0.0 1.2 1 0 0 1 1 1 0 Asp/Glu/Hydantoin racemase TGT PF01702.18 gi|452209687|ref|YP_007489801.1| - 1.7e-89 300.4 0.0 2.3e-89 300.0 0.0 1.1 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase DUF5591 PF17884.1 gi|452209687|ref|YP_007489801.1| - 0.072 12.9 0.0 0.18 11.7 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF5591) UbiA PF01040.18 gi|452209688|ref|YP_007489802.1| - 1.7e-38 132.4 17.8 2.2e-38 132.0 17.8 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family HI0933_like PF03486.14 gi|452209689|ref|YP_007489803.1| - 2.7e-09 36.3 0.2 2.3e-07 29.9 0.1 2.2 2 0 0 2 2 2 1 HI0933-like protein DAO PF01266.24 gi|452209689|ref|YP_007489803.1| - 2.8e-09 37.0 0.1 0.00011 22.0 0.0 2.2 1 1 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 gi|452209689|ref|YP_007489803.1| - 1.4e-08 34.4 0.5 3.1e-07 29.9 0.1 2.5 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 gi|452209689|ref|YP_007489803.1| - 1.9e-08 33.9 0.5 0.00016 21.0 0.0 2.6 2 1 1 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|452209689|ref|YP_007489803.1| - 3.8e-08 33.0 0.0 0.00011 21.6 0.0 2.2 2 0 0 2 2 2 2 FAD binding domain Lycopene_cycl PF05834.12 gi|452209689|ref|YP_007489803.1| - 4.3e-07 29.3 0.0 6.2e-07 28.8 0.0 1.2 1 0 0 1 1 1 1 Lycopene cyclase protein FAD_oxidored PF12831.7 gi|452209689|ref|YP_007489803.1| - 8.1e-07 28.7 0.1 1.7e-06 27.6 0.1 1.5 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|452209689|ref|YP_007489803.1| - 0.00017 20.8 0.0 0.00041 19.5 0.0 1.7 2 0 0 2 2 2 1 FAD binding domain Thi4 PF01946.17 gi|452209689|ref|YP_007489803.1| - 0.00055 19.2 0.5 0.0009 18.6 0.0 1.6 2 0 0 2 2 2 1 Thi4 family NAD_binding_8 PF13450.6 gi|452209689|ref|YP_007489803.1| - 0.0018 18.5 0.0 0.0057 16.9 0.0 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 gi|452209689|ref|YP_007489803.1| - 0.0021 18.5 0.0 0.043 14.4 0.0 2.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|452209689|ref|YP_007489803.1| - 0.0033 16.6 0.0 0.011 14.8 0.0 2.1 2 0 0 2 2 2 1 Glucose inhibited division protein A AlaDh_PNT_C PF01262.21 gi|452209689|ref|YP_007489803.1| - 0.012 14.9 0.3 0.058 12.7 0.0 2.0 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain Trp_halogenase PF04820.14 gi|452209689|ref|YP_007489803.1| - 0.065 12.1 0.0 3.1 6.5 0.0 2.1 2 0 0 2 2 2 0 Tryptophan halogenase Radical_SAM PF04055.21 gi|452209690|ref|YP_007489804.1| - 6.6e-20 72.2 0.0 9.4e-20 71.6 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily SPASM PF13186.6 gi|452209690|ref|YP_007489804.1| - 2.6e-06 27.9 0.3 6.9e-06 26.5 0.3 1.8 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.6 gi|452209690|ref|YP_007489804.1| - 0.00091 19.5 0.0 0.0017 18.6 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|452209690|ref|YP_007489804.1| - 0.0019 18.3 0.0 0.0039 17.3 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain DUF3577 PF12101.8 gi|452209691|ref|YP_007489805.1| - 0.0068 16.2 1.1 0.0068 16.2 1.1 2.6 1 1 1 3 3 3 1 Protein of unknown function (DUF3577) Sec34 PF04136.15 gi|452209691|ref|YP_007489805.1| - 0.016 15.1 6.2 0.016 15.1 6.2 2.9 1 1 2 3 3 3 0 Sec34-like family MAD PF05557.13 gi|452209691|ref|YP_007489805.1| - 1.6 7.0 40.6 4 5.7 10.4 2.0 1 1 1 2 2 2 0 Mitotic checkpoint protein CALCOCO1 PF07888.11 gi|452209691|ref|YP_007489805.1| - 3.7 6.3 39.3 0.75 8.6 34.8 1.7 1 1 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like Fez1 PF06818.15 gi|452209691|ref|YP_007489805.1| - 3.7 7.9 36.3 4.5 7.7 15.3 2.5 1 1 1 2 2 2 0 Fez1 HAD PF12710.7 gi|452209692|ref|YP_007489806.1| - 6.5e-22 78.8 0.0 8.1e-22 78.5 0.0 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|452209692|ref|YP_007489806.1| - 1.6e-19 71.1 0.4 2.3e-19 70.5 0.4 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|452209692|ref|YP_007489806.1| - 4.6e-11 42.9 0.1 4.9e-09 36.3 0.0 2.7 3 0 0 3 3 3 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|452209692|ref|YP_007489806.1| - 4.8e-07 30.0 0.2 2.8e-05 24.3 0.2 2.8 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.12 gi|452209692|ref|YP_007489806.1| - 4.1e-06 26.4 0.0 0.012 15.0 0.0 2.1 2 0 0 2 2 2 2 Putative Phosphatase S6PP PF05116.13 gi|452209692|ref|YP_007489806.1| - 0.00066 19.3 0.1 0.069 12.7 0.0 2.1 2 0 0 2 2 2 1 Sucrose-6F-phosphate phosphohydrolase DUF373 PF04123.13 gi|452209692|ref|YP_007489806.1| - 0.035 13.5 0.0 0.055 12.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF373) DUF705 PF05152.12 gi|452209692|ref|YP_007489806.1| - 0.094 12.2 0.1 0.15 11.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF705) Ribosomal_S24e PF01282.19 gi|452209692|ref|YP_007489806.1| - 0.13 12.3 0.0 0.28 11.2 0.0 1.5 1 0 0 1 1 1 0 Ribosomal protein S24e MTD PF01993.18 gi|452209694|ref|YP_007489808.1| - 5.3e-126 419.5 2.1 5.9e-126 419.4 2.1 1.0 1 0 0 1 1 1 1 methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase CheD PF03975.13 gi|452209694|ref|YP_007489808.1| - 0.093 12.8 0.1 0.19 11.8 0.1 1.5 1 0 0 1 1 1 0 CheD chemotactic sensory transduction DUF2111 PF09884.9 gi|452209696|ref|YP_007489810.1| - 3.3e-34 116.8 0.2 4.8e-34 116.3 0.2 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2111) Oxidored_molyb PF00174.19 gi|452209696|ref|YP_007489810.1| - 0.19 11.3 0.0 0.2 11.2 0.0 1.1 1 0 0 1 1 1 0 Oxidoreductase molybdopterin binding domain DUF166 PF02593.14 gi|452209697|ref|YP_007489811.1| - 1.6e-60 204.4 0.0 1.8e-60 204.2 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function DapB_N PF01113.20 gi|452209697|ref|YP_007489811.1| - 0.0033 17.5 0.0 0.01 16.0 0.0 1.8 1 1 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus CoA_binding_2 PF13380.6 gi|452209697|ref|YP_007489811.1| - 0.12 12.8 0.0 0.24 11.9 0.0 1.5 1 1 0 1 1 1 0 CoA binding domain Thymidylate_kin PF02223.17 gi|452209698|ref|YP_007489812.1| - 2e-35 122.2 0.0 2.4e-35 121.9 0.0 1.0 1 0 0 1 1 1 1 Thymidylate kinase AAA_33 PF13671.6 gi|452209698|ref|YP_007489812.1| - 3.1e-05 24.2 0.0 5.2e-05 23.4 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|452209698|ref|YP_007489812.1| - 5.6e-05 23.7 0.0 0.00012 22.6 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|452209698|ref|YP_007489812.1| - 0.00031 21.2 0.0 0.004 17.6 0.0 2.1 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.6 gi|452209698|ref|YP_007489812.1| - 0.0005 20.3 0.0 0.00061 20.1 0.0 1.1 1 0 0 1 1 1 1 AAA domain CPT PF07931.12 gi|452209698|ref|YP_007489812.1| - 0.018 14.9 0.1 0.081 12.8 0.1 1.9 1 1 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein AAA_22 PF13401.6 gi|452209698|ref|YP_007489812.1| - 0.022 15.0 0.0 0.035 14.4 0.0 1.5 1 1 0 1 1 1 0 AAA domain dNK PF01712.19 gi|452209698|ref|YP_007489812.1| - 0.027 14.3 0.0 0.07 13.0 0.0 1.8 1 1 0 1 1 1 0 Deoxynucleoside kinase CKS PF01111.19 gi|452209698|ref|YP_007489812.1| - 0.071 13.4 0.0 0.13 12.6 0.0 1.4 1 0 0 1 1 1 0 Cyclin-dependent kinase regulatory subunit NB-ARC PF00931.22 gi|452209698|ref|YP_007489812.1| - 0.08 12.1 0.0 0.1 11.8 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain Zeta_toxin PF06414.12 gi|452209698|ref|YP_007489812.1| - 0.083 12.2 0.0 0.93 8.7 0.0 2.1 2 0 0 2 2 2 0 Zeta toxin Cytidylate_kin PF02224.18 gi|452209698|ref|YP_007489812.1| - 0.11 12.2 0.0 0.15 11.8 0.0 1.4 1 1 0 1 1 1 0 Cytidylate kinase AAA_24 PF13479.6 gi|452209698|ref|YP_007489812.1| - 0.15 11.7 0.1 0.32 10.7 0.1 1.7 1 1 0 1 1 1 0 AAA domain His_biosynth PF00977.21 gi|452209700|ref|YP_007489814.1| - 4.6e-30 104.8 0.0 5.5e-30 104.5 0.0 1.1 1 0 0 1 1 1 1 Histidine biosynthesis protein PRAI PF00697.22 gi|452209700|ref|YP_007489814.1| - 0.021 14.6 0.0 0.04 13.7 0.0 1.4 1 0 0 1 1 1 0 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FMN_dh PF01070.18 gi|452209700|ref|YP_007489814.1| - 0.13 11.2 2.3 0.5 9.3 0.1 2.0 2 0 0 2 2 2 0 FMN-dependent dehydrogenase 4HFCP_synth PF04476.13 gi|452209701|ref|YP_007489815.1| - 2.4e-91 305.5 0.0 2.7e-91 305.3 0.0 1.0 1 0 0 1 1 1 1 4-HFC-P synthase YdjM PF04307.14 gi|452209702|ref|YP_007489816.1| - 4.9e-17 61.8 2.5 5.7e-17 61.6 2.5 1.1 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase Polysacc_deac_1 PF01522.21 gi|452209705|ref|YP_007489819.1| - 7.9e-20 71.0 0.0 1.1e-19 70.6 0.0 1.2 1 0 0 1 1 1 1 Polysaccharide deacetylase DUF3473 PF11959.8 gi|452209705|ref|YP_007489819.1| - 8.4e-09 35.5 0.0 2.1e-08 34.2 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF3473) DUF2334 PF10096.9 gi|452209705|ref|YP_007489819.1| - 0.0026 17.5 0.0 0.0044 16.7 0.0 1.6 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2334) Disaggr_repeat PF06848.11 gi|452209707|ref|YP_007489821.1| - 1.5e-88 295.2 2.9 3e-88 294.2 2.9 1.5 1 0 0 1 1 1 1 Disaggregatase related repeat Pectate_lyase_3 PF12708.7 gi|452209707|ref|YP_007489821.1| - 7.4e-14 52.1 8.4 7.4e-14 52.1 8.4 2.7 1 1 2 3 3 3 2 Pectate lyase superfamily protein Beta_helix PF13229.6 gi|452209707|ref|YP_007489821.1| - 9.4e-10 38.6 22.0 9.4e-10 38.6 22.0 2.8 2 1 0 2 2 2 1 Right handed beta helix region Phage_integrase PF00589.22 gi|452209707|ref|YP_007489821.1| - 0.061 13.1 0.0 10 5.8 0.0 2.3 2 0 0 2 2 2 0 Phage integrase family DUF966 PF06136.13 gi|452209707|ref|YP_007489821.1| - 6.5 6.4 10.6 9.7 5.8 10.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF966) Disaggr_assoc PF08480.10 gi|452209709|ref|YP_007489823.1| - 6e-83 277.4 13.8 6e-83 277.4 13.8 2.6 2 1 1 3 3 3 1 Disaggregatase related Beta_helix PF13229.6 gi|452209709|ref|YP_007489823.1| - 9.9e-17 61.2 40.2 1.9e-14 53.8 17.0 2.7 1 1 1 2 2 2 2 Right handed beta helix region Disaggr_repeat PF06848.11 gi|452209710|ref|YP_007489824.1| - 1.6e-82 275.6 1.6 3.1e-82 274.6 1.6 1.5 1 0 0 1 1 1 1 Disaggregatase related repeat Disaggr_assoc PF08480.10 gi|452209710|ref|YP_007489824.1| - 2.9e-77 258.9 5.5 2.9e-77 258.9 5.5 2.5 2 0 0 2 2 2 1 Disaggregatase related Beta_helix PF13229.6 gi|452209710|ref|YP_007489824.1| - 7.4e-15 55.1 35.5 1.1e-10 41.5 19.0 3.2 1 1 1 2 2 2 2 Right handed beta helix region CarboxypepD_reg PF13620.6 gi|452209710|ref|YP_007489824.1| - 0.023 15.0 0.1 0.052 13.8 0.1 1.6 1 0 0 1 1 1 0 Carboxypeptidase regulatory-like domain DUF5123 PF17161.4 gi|452209710|ref|YP_007489824.1| - 1.5 9.9 11.4 1.7 9.7 3.6 3.1 2 1 1 3 3 3 0 Domain of unknown function (DUF5123) Glycos_transf_2 PF00535.26 gi|452209712|ref|YP_007489826.1| - 9.8e-25 87.3 0.0 1.4e-23 83.5 0.0 2.2 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_4 PF13704.6 gi|452209712|ref|YP_007489826.1| - 1.2e-05 25.7 0.0 2.9e-05 24.5 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|452209712|ref|YP_007489826.1| - 0.00028 20.8 0.0 0.00043 20.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 ADD_ATRX PF17981.1 gi|452209713|ref|YP_007489827.1| - 0.024 14.5 0.5 0.027 14.3 0.5 1.3 1 0 0 1 1 1 0 Cysteine Rich ADD domain GFO_IDH_MocA PF01408.22 gi|452209714|ref|YP_007489828.1| - 6e-29 101.3 0.0 9.5e-29 100.7 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 gi|452209714|ref|YP_007489828.1| - 2.7e-05 24.1 0.4 8.5e-05 22.5 0.1 2.0 2 0 0 2 2 2 1 Oxidoreductase family, C-terminal alpha/beta domain Semialdhyde_dh PF01118.24 gi|452209714|ref|YP_007489828.1| - 0.00023 21.6 0.0 0.00043 20.7 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 gi|452209714|ref|YP_007489828.1| - 0.034 14.2 0.0 0.062 13.4 0.0 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase DapB_N PF01113.20 gi|452209714|ref|YP_007489828.1| - 0.049 13.7 0.1 0.12 12.5 0.1 1.8 1 1 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus UDPG_MGDP_dh_N PF03721.14 gi|452209714|ref|YP_007489828.1| - 0.079 12.5 0.0 0.19 11.3 0.0 1.5 1 1 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F420_oxidored PF03807.17 gi|452209714|ref|YP_007489828.1| - 0.11 13.1 0.0 0.32 11.6 0.0 1.9 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent LZ_Tnp_IS481 PF13011.6 gi|452209715|ref|YP_007489829.1| - 0.09 13.3 0.2 0.099 13.2 0.2 1.1 1 0 0 1 1 1 0 leucine-zipper of insertion element IS481 Polysacc_synt_3 PF13440.6 gi|452209717|ref|YP_007489831.1| - 8.8e-26 90.8 12.7 8.8e-26 90.8 12.7 2.2 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt PF01943.17 gi|452209717|ref|YP_007489831.1| - 2.6e-16 59.8 20.6 2.6e-16 59.8 20.6 3.1 2 1 1 3 3 3 1 Polysaccharide biosynthesis protein Acetyltransf_6 PF13480.7 gi|452209719|ref|YP_007489833.1| - 1e-13 51.6 0.0 9.8e-13 48.5 0.0 2.0 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FemAB PF02388.16 gi|452209719|ref|YP_007489833.1| - 0.0062 15.5 0.0 3.3 6.5 0.0 2.8 2 1 1 3 3 3 2 FemAB family FemAB_like PF04339.12 gi|452209719|ref|YP_007489833.1| - 0.047 12.8 0.0 0.089 11.9 0.0 1.4 1 0 0 1 1 1 0 Peptidogalycan biosysnthesis/recognition DUF4301 PF14134.6 gi|452209719|ref|YP_007489833.1| - 0.06 12.1 0.0 0.091 11.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4301) Acetyltransf_9 PF13527.7 gi|452209719|ref|YP_007489833.1| - 0.09 12.9 0.0 0.4 10.7 0.0 2.0 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain Glycos_transf_1 PF00534.20 gi|452209720|ref|YP_007489834.1| - 5.5e-34 117.2 0.0 1.1e-33 116.2 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|452209720|ref|YP_007489834.1| - 1.6e-30 106.3 0.0 2.5e-30 105.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|452209720|ref|YP_007489834.1| - 1.6e-18 67.3 0.0 2.3e-18 66.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|452209720|ref|YP_007489834.1| - 7.8e-11 42.2 0.0 1.4e-10 41.4 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|452209720|ref|YP_007489834.1| - 1.9e-08 34.9 0.0 2.8e-08 34.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|452209720|ref|YP_007489834.1| - 9.4e-06 25.7 0.0 3.1e-05 24.0 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferase 4-like Glycos_transf_2 PF00535.26 gi|452209721|ref|YP_007489835.1| - 2.5e-15 56.7 0.0 1.3e-14 54.4 0.0 2.0 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|452209721|ref|YP_007489835.1| - 4.3e-07 30.1 0.0 9.8e-06 25.6 0.0 2.1 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|452209721|ref|YP_007489835.1| - 0.0033 17.3 0.0 0.012 15.5 0.0 1.8 1 1 1 2 2 2 1 Glycosyl transferase family group 2 Glyco_tranf_2_4 PF13704.6 gi|452209721|ref|YP_007489835.1| - 0.0036 17.8 0.0 0.024 15.1 0.0 2.1 2 0 0 2 2 2 1 Glycosyl transferase family 2 Polysacc_deac_1 PF01522.21 gi|452209722|ref|YP_007489836.1| - 0.024 14.5 0.0 0.11 12.4 0.0 1.9 1 1 0 1 1 1 0 Polysaccharide deacetylase DUF354 PF04007.12 gi|452209723|ref|YP_007489837.1| - 1.5e-28 99.9 0.0 1.7e-28 99.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF354) Glyco_trans_4_2 PF13477.6 gi|452209723|ref|YP_007489837.1| - 0.0016 18.4 0.3 0.0031 17.5 0.3 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_transf_4 PF13439.6 gi|452209723|ref|YP_007489837.1| - 0.029 14.4 0.0 0.054 13.5 0.0 1.4 1 0 0 1 1 1 0 Glycosyltransferase Family 4 HTH_psq PF05225.16 gi|452209723|ref|YP_007489837.1| - 0.059 13.1 0.0 0.14 11.9 0.0 1.6 1 0 0 1 1 1 0 helix-turn-helix, Psq domain UDPG_MGDP_dh_N PF03721.14 gi|452209725|ref|YP_007489839.1| - 4.3e-64 215.5 1.2 6.2e-64 215.0 1.2 1.2 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 gi|452209725|ref|YP_007489839.1| - 6.4e-38 128.9 0.1 1.7e-37 127.5 0.1 1.7 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 gi|452209725|ref|YP_007489839.1| - 1e-30 106.2 0.1 2.7e-30 104.9 0.1 1.7 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F420_oxidored PF03807.17 gi|452209725|ref|YP_007489839.1| - 1.3e-06 28.8 0.9 0.04 14.5 0.3 4.0 3 1 1 4 4 4 2 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.18 gi|452209725|ref|YP_007489839.1| - 1.5e-05 24.9 0.1 4.1e-05 23.5 0.1 1.8 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 gi|452209725|ref|YP_007489839.1| - 0.00014 22.1 0.1 0.015 15.4 0.1 2.5 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase 2-Hacid_dh_C PF02826.19 gi|452209725|ref|YP_007489839.1| - 0.0002 20.8 0.1 0.023 14.0 0.0 2.4 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|452209725|ref|YP_007489839.1| - 0.00025 21.0 0.3 0.002 18.1 0.1 2.7 3 1 0 3 3 3 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ApbA PF02558.16 gi|452209725|ref|YP_007489839.1| - 0.0042 16.7 0.1 0.013 15.1 0.1 1.9 1 1 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_binding_11 PF14833.6 gi|452209725|ref|YP_007489839.1| - 0.0053 17.0 0.1 0.014 15.6 0.1 1.8 1 1 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Pyr_redox_2 PF07992.14 gi|452209725|ref|YP_007489839.1| - 0.0066 15.7 0.1 0.015 14.5 0.1 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|452209725|ref|YP_007489839.1| - 0.0074 16.8 0.1 0.033 14.8 0.1 2.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|452209725|ref|YP_007489839.1| - 0.0091 15.3 0.1 0.027 13.8 0.0 1.8 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain DpaA_N PF16924.5 gi|452209725|ref|YP_007489839.1| - 0.013 15.6 0.1 0.079 13.1 0.0 2.4 3 0 0 3 3 2 0 Dipicolinate synthase subunit A N-terminal domain Rossmann-like PF10727.9 gi|452209725|ref|YP_007489839.1| - 0.022 14.6 0.7 0.086 12.7 0.1 2.0 1 1 0 2 2 2 0 Rossmann-like domain GFO_IDH_MocA PF01408.22 gi|452209725|ref|YP_007489839.1| - 0.061 14.1 0.2 0.36 11.7 0.1 2.3 2 0 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold FAD_binding_3 PF01494.19 gi|452209725|ref|YP_007489839.1| - 0.061 12.6 0.1 0.1 11.8 0.1 1.3 1 0 0 1 1 1 0 FAD binding domain TrkA_N PF02254.18 gi|452209725|ref|YP_007489839.1| - 0.079 13.2 1.4 0.18 12.1 0.1 2.4 3 1 0 3 3 2 0 TrkA-N domain NAD_binding_8 PF13450.6 gi|452209725|ref|YP_007489839.1| - 5.7 7.2 5.0 0.98 9.7 0.2 2.2 3 0 0 3 3 3 0 NAD(P)-binding Rossmann-like domain NTP_transferase PF00483.23 gi|452209726|ref|YP_007489840.1| - 1.7e-30 106.4 0.0 2.1e-30 106.1 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|452209726|ref|YP_007489840.1| - 7.3e-09 36.2 0.0 1.4e-08 35.3 0.0 1.5 1 0 0 1 1 1 1 MobA-like NTP transferase domain Smr PF01713.21 gi|452209726|ref|YP_007489840.1| - 0.0055 17.0 0.0 0.2 12.0 0.0 2.8 3 0 0 3 3 3 1 Smr domain IspD PF01128.19 gi|452209726|ref|YP_007489840.1| - 0.013 15.3 0.0 0.022 14.5 0.0 1.3 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Glycos_transf_2 PF00535.26 gi|452209726|ref|YP_007489840.1| - 0.013 15.3 0.0 0.02 14.7 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family 2 CTP_transf_3 PF02348.19 gi|452209726|ref|YP_007489840.1| - 0.16 11.9 0.0 0.29 11.0 0.0 1.3 1 0 0 1 1 1 0 Cytidylyltransferase Epimerase PF01370.21 gi|452209727|ref|YP_007489841.1| - 5.9e-50 170.0 0.0 7.1e-50 169.7 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|452209727|ref|YP_007489841.1| - 6.8e-45 153.9 0.0 1.8e-44 152.5 0.0 1.7 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|452209727|ref|YP_007489841.1| - 2.7e-19 69.2 0.0 3.5e-19 68.9 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|452209727|ref|YP_007489841.1| - 2.9e-18 66.0 0.5 3.9e-16 59.0 0.5 2.8 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 gi|452209727|ref|YP_007489841.1| - 3.5e-17 62.4 0.0 4.5e-17 62.1 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 gi|452209727|ref|YP_007489841.1| - 1.9e-15 56.7 0.1 5.1e-10 39.0 0.0 2.8 1 1 1 2 2 2 2 Male sterility protein NAD_binding_10 PF13460.6 gi|452209727|ref|YP_007489841.1| - 6.9e-10 39.1 0.0 1.4e-09 38.1 0.0 1.5 1 1 1 2 2 2 1 NAD(P)H-binding adh_short PF00106.25 gi|452209727|ref|YP_007489841.1| - 0.00019 21.0 0.3 0.013 15.0 0.3 2.6 1 1 0 1 1 1 1 short chain dehydrogenase NAD_binding_7 PF13241.6 gi|452209727|ref|YP_007489841.1| - 0.017 15.6 0.0 0.033 14.6 0.0 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding NmrA PF05368.13 gi|452209727|ref|YP_007489841.1| - 0.018 14.6 0.2 0.68 9.4 0.0 2.6 2 1 0 2 2 2 0 NmrA-like family NAD_binding_2 PF03446.15 gi|452209727|ref|YP_007489841.1| - 0.11 12.7 0.0 0.31 11.2 0.0 1.7 2 0 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase Polysacc_synt PF01943.17 gi|452209728|ref|YP_007489842.1| - 6.4e-22 78.2 31.5 6.4e-22 78.2 31.5 2.2 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.6 gi|452209728|ref|YP_007489842.1| - 2.5e-21 76.1 19.9 2.5e-21 76.1 19.9 2.3 2 1 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|452209728|ref|YP_007489842.1| - 2e-17 63.6 22.0 2e-17 63.6 22.0 3.5 3 1 0 3 3 3 2 Polysaccharide biosynthesis C-terminal domain MurJ PF03023.14 gi|452209728|ref|YP_007489842.1| - 5.8e-09 35.1 42.6 1.1e-08 34.2 42.6 1.4 1 1 0 1 1 1 1 Lipid II flippase MurJ MatE PF01554.18 gi|452209728|ref|YP_007489842.1| - 2.9e-05 23.8 9.4 2.9e-05 23.8 9.4 4.6 2 2 3 5 5 5 2 MatE Glycos_transf_1 PF00534.20 gi|452209730|ref|YP_007489844.1| - 2.1e-28 99.0 0.0 8.3e-28 97.1 0.0 2.1 2 1 1 3 3 3 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|452209730|ref|YP_007489844.1| - 7.9e-28 97.6 0.0 2.3e-27 96.0 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|452209730|ref|YP_007489844.1| - 1.3e-13 51.3 0.0 2.3e-13 50.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|452209730|ref|YP_007489844.1| - 2.5e-10 40.6 0.0 8e-10 39.0 0.0 1.9 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|452209730|ref|YP_007489844.1| - 9.5e-08 32.6 0.0 1.3e-07 32.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glycos_transf_1 PF00534.20 gi|452209731|ref|YP_007489845.1| - 8.1e-43 145.9 0.0 1.2e-42 145.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|452209731|ref|YP_007489845.1| - 2.5e-34 118.6 0.0 5.8e-34 117.4 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|452209731|ref|YP_007489845.1| - 3.9e-19 69.3 0.0 6.7e-19 68.5 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|452209731|ref|YP_007489845.1| - 4.9e-11 42.9 0.0 9.5e-11 42.0 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|452209731|ref|YP_007489845.1| - 1.4e-09 38.6 0.0 2.3e-09 37.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|452209731|ref|YP_007489845.1| - 0.023 14.7 0.1 0.15 12.1 0.1 2.2 1 1 0 1 1 1 0 Glycosyl transferase 4-like Nudc_N PF14050.6 gi|452209731|ref|YP_007489845.1| - 0.14 12.2 0.0 0.27 11.2 0.0 1.5 1 0 0 1 1 1 0 N-terminal conserved domain of Nudc. Glycos_transf_2 PF00535.26 gi|452209732|ref|YP_007489846.1| - 1.3e-27 96.7 0.0 1.8e-27 96.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|452209732|ref|YP_007489846.1| - 5.3e-15 55.9 0.0 1e-14 55.0 0.0 1.4 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|452209732|ref|YP_007489846.1| - 2.9e-12 46.7 0.3 2.3e-11 43.7 0.3 2.0 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|452209732|ref|YP_007489846.1| - 1.1e-06 28.7 0.0 2e-06 27.9 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_4 PF13704.6 gi|452209732|ref|YP_007489846.1| - 5.2e-05 23.7 0.0 0.00013 22.5 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferase family 2 Anp1 PF03452.14 gi|452209732|ref|YP_007489846.1| - 0.0097 15.4 0.0 0.25 10.7 0.0 2.0 1 1 1 2 2 2 1 Anp1 GNT-I PF03071.15 gi|452209732|ref|YP_007489846.1| - 0.084 11.6 0.0 0.12 11.2 0.0 1.2 1 0 0 1 1 1 0 GNT-I family DUF373 PF04123.13 gi|452209733|ref|YP_007489847.1| - 0.059 12.8 2.0 0.068 12.6 2.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF373) TMEM70 PF06979.12 gi|452209733|ref|YP_007489847.1| - 0.13 12.6 0.5 0.24 11.8 0.5 1.5 1 0 0 1 1 1 0 Assembly, mitochondrial proton-transport ATP synth complex Glycos_transf_2 PF00535.26 gi|452209734|ref|YP_007489848.1| - 6e-34 117.3 0.1 8.5e-34 116.8 0.1 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|452209734|ref|YP_007489848.1| - 5e-21 75.4 1.1 7e-21 74.9 1.1 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.6 gi|452209734|ref|YP_007489848.1| - 8.3e-10 38.9 0.0 1.3e-09 38.3 0.0 1.3 1 1 0 1 1 1 1 Glycosyltransferase like family 2 V-set PF07686.17 gi|452209734|ref|YP_007489848.1| - 0.056 13.6 0.0 0.11 12.7 0.0 1.5 1 0 0 1 1 1 0 Immunoglobulin V-set domain Glyco_tranf_2_4 PF13704.6 gi|452209734|ref|YP_007489848.1| - 0.12 12.9 0.1 0.34 11.5 0.1 1.8 1 1 0 1 1 1 0 Glycosyl transferase family 2 Glycos_transf_1 PF00534.20 gi|452209735|ref|YP_007489849.1| - 1.6e-46 157.9 0.0 3.5e-46 156.9 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|452209735|ref|YP_007489849.1| - 8.5e-35 120.1 0.0 4e-34 117.9 0.0 2.0 2 1 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|452209735|ref|YP_007489849.1| - 2.8e-29 102.3 0.0 4e-29 101.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|452209735|ref|YP_007489849.1| - 5.7e-17 62.6 0.0 7.6e-17 62.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 gi|452209735|ref|YP_007489849.1| - 2.1e-15 56.8 0.0 4.2e-15 55.9 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.6 gi|452209735|ref|YP_007489849.1| - 2.2e-09 37.5 0.7 6.8e-09 35.9 0.6 1.9 2 0 0 2 2 2 1 Glycosyl transferase 4-like Glyco_transf_5 PF08323.11 gi|452209735|ref|YP_007489849.1| - 7.2e-06 25.9 0.0 2.9e-05 23.9 0.0 2.0 1 1 0 1 1 1 1 Starch synthase catalytic domain Glycos_transf_1 PF00534.20 gi|452209736|ref|YP_007489850.1| - 1.3e-32 112.7 0.0 2.9e-32 111.6 0.0 1.6 1 1 1 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|452209736|ref|YP_007489850.1| - 2.8e-29 102.2 0.0 6.8e-29 101.0 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|452209736|ref|YP_007489850.1| - 2.1e-15 57.2 0.0 3e-15 56.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|452209736|ref|YP_007489850.1| - 5.1e-12 46.0 0.0 1.2e-11 44.8 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.6 gi|452209736|ref|YP_007489850.1| - 0.00057 19.9 0.1 0.00098 19.2 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_4_4 PF13579.6 gi|452209736|ref|YP_007489850.1| - 0.0015 19.0 0.0 0.0031 18.0 0.0 1.5 1 1 0 1 1 1 1 Glycosyl transferase 4-like domain DUF3107 PF11305.8 gi|452209736|ref|YP_007489850.1| - 0.054 13.8 0.0 0.17 12.1 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3107) Disaggr_repeat PF06848.11 gi|452209738|ref|YP_007489852.1| - 1.9e-228 751.0 34.9 2.2e-86 288.1 7.2 4.3 3 1 1 4 4 4 4 Disaggregatase related repeat Disaggr_assoc PF08480.10 gi|452209738|ref|YP_007489852.1| - 5.6e-66 222.0 11.9 5.6e-66 222.0 11.9 2.8 2 0 0 2 2 2 1 Disaggregatase related Beta_helix PF13229.6 gi|452209738|ref|YP_007489852.1| - 2.6e-13 50.1 17.4 2.6e-13 50.1 17.4 4.9 4 1 1 5 5 5 2 Right handed beta helix region TGFb_propeptide PF00688.18 gi|452209738|ref|YP_007489852.1| - 4.5e-08 33.1 0.0 0.38 10.5 0.0 5.2 5 0 0 5 5 5 3 TGF-beta propeptide DUF5123 PF17161.4 gi|452209738|ref|YP_007489852.1| - 1.5e-07 32.4 0.6 1.5e-07 32.4 0.6 4.4 5 0 0 5 5 5 1 Domain of unknown function (DUF5123) DUF295 PF03478.18 gi|452209738|ref|YP_007489852.1| - 1.4 8.6 4.5 1.9 8.1 0.4 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF295) Disaggr_assoc PF08480.10 gi|452209740|ref|YP_007489854.1| - 1.1e-84 283.1 7.8 1.1e-84 283.1 7.8 2.9 2 1 1 3 3 3 1 Disaggregatase related Beta_helix PF13229.6 gi|452209740|ref|YP_007489854.1| - 8.8e-19 67.9 43.6 1.9e-14 53.8 26.5 3.3 1 1 1 2 2 2 2 Right handed beta helix region DUF5123 PF17161.4 gi|452209740|ref|YP_007489854.1| - 0.0074 17.4 0.2 0.0074 17.4 0.2 3.5 2 1 1 3 3 3 1 Domain of unknown function (DUF5123) Imm58 PF15581.6 gi|452209741|ref|YP_007489855.1| - 0.13 12.4 0.2 0.13 12.4 0.2 3.6 3 1 0 3 3 3 0 Immunity protein 58 Glycos_transf_2 PF00535.26 gi|452209742|ref|YP_007489856.1| - 5.8e-26 91.3 0.0 8.6e-26 90.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_4 PF13704.6 gi|452209742|ref|YP_007489856.1| - 1.8e-05 25.2 0.0 0.00036 21.0 0.0 2.2 1 1 1 2 2 2 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|452209742|ref|YP_007489856.1| - 1.8e-05 24.7 0.0 3e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|452209742|ref|YP_007489856.1| - 0.081 12.4 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Glycosyltransferase like family 2 DUF373 PF04123.13 gi|452209742|ref|YP_007489856.1| - 1.9 7.9 10.1 0.67 9.3 3.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF373) DUF1616 PF07760.11 gi|452209743|ref|YP_007489857.1| - 1.3e-88 297.2 0.3 1.5e-88 297.0 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) CopD PF05425.13 gi|452209743|ref|YP_007489857.1| - 0.019 15.3 4.6 2.1 8.8 1.8 2.4 1 1 1 2 2 2 0 Copper resistance protein D DUF4131 PF13567.6 gi|452209743|ref|YP_007489857.1| - 6.6 6.4 6.5 6.5 6.4 0.0 2.2 1 1 0 2 2 2 0 Domain of unknown function (DUF4131) CPBP PF02517.16 gi|452209744|ref|YP_007489858.1| - 7.2e-17 61.6 8.9 7.2e-17 61.6 8.9 2.7 2 1 0 2 2 2 2 CPBP intramembrane metalloprotease DUF3675 PF12428.8 gi|452209745|ref|YP_007489859.1| - 0.045 14.3 1.3 0.05 14.2 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3675) Hexapep PF00132.24 gi|452209746|ref|YP_007489860.1| - 1.3e-31 107.1 24.5 4.9e-08 32.4 2.2 5.3 4 1 0 5 5 5 5 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|452209746|ref|YP_007489860.1| - 5.2e-14 51.7 25.9 3.4e-06 26.7 6.3 5.3 5 0 0 5 5 5 4 Hexapeptide repeat of succinyl-transferase Bactofilin PF04519.13 gi|452209746|ref|YP_007489860.1| - 0.49 10.7 6.6 0.32 11.3 3.0 2.4 2 1 0 2 2 2 0 Polymer-forming cytoskeletal DegT_DnrJ_EryC1 PF01041.17 gi|452209747|ref|YP_007489861.1| - 2.5e-139 464.6 0.1 2.9e-139 464.4 0.1 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 gi|452209747|ref|YP_007489861.1| - 7.9e-09 35.2 0.3 2.8e-08 33.4 0.3 1.7 1 1 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 gi|452209747|ref|YP_007489861.1| - 2.3e-07 29.7 0.1 6.9e-07 28.1 0.0 1.8 2 0 0 2 2 2 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.19 gi|452209747|ref|YP_007489861.1| - 3.9e-06 26.1 0.1 0.00036 19.6 0.1 2.1 2 0 0 2 2 2 2 Aminotransferase class-V GFO_IDH_MocA PF01408.22 gi|452209748|ref|YP_007489862.1| - 4.8e-25 88.7 0.9 8.4e-25 87.9 0.9 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.17 gi|452209748|ref|YP_007489862.1| - 3e-05 24.0 0.0 8.5e-05 22.6 0.0 1.8 2 0 0 2 2 2 1 Oxidoreductase family, C-terminal alpha/beta domain UDPG_MGDP_dh_N PF03721.14 gi|452209749|ref|YP_007489863.1| - 5.5e-37 127.2 0.0 8.8e-37 126.5 0.0 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 gi|452209749|ref|YP_007489863.1| - 2.1e-21 76.0 0.0 7.9e-20 70.9 0.0 2.4 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 gi|452209749|ref|YP_007489863.1| - 2.4e-20 72.9 0.1 7e-20 71.4 0.0 1.8 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain THF_DHG_CYH_C PF02882.19 gi|452209749|ref|YP_007489863.1| - 0.037 13.4 1.1 3 7.1 0.1 2.8 3 1 0 3 3 3 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 2-Hacid_dh_C PF02826.19 gi|452209749|ref|YP_007489863.1| - 0.042 13.2 0.1 10 5.4 0.0 2.4 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Polysacc_deac_1 PF01522.21 gi|452209750|ref|YP_007489864.1| - 0.00074 19.4 0.0 0.0029 17.5 0.0 2.0 1 1 0 1 1 1 1 Polysaccharide deacetylase Glyco_hydro_57 PF03065.15 gi|452209750|ref|YP_007489864.1| - 0.018 14.3 0.5 0.046 12.9 0.1 1.7 2 0 0 2 2 2 0 Glycosyl hydrolase family 57 Polysacc_synt_3 PF13440.6 gi|452209751|ref|YP_007489865.1| - 5.3e-20 71.8 8.6 5.3e-20 71.8 8.6 2.0 2 2 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt PF01943.17 gi|452209751|ref|YP_007489865.1| - 6.1e-09 35.6 11.3 6.1e-09 35.6 11.3 3.7 1 1 2 3 3 3 1 Polysaccharide biosynthesis protein Y_Y_Y PF07495.13 gi|452209752|ref|YP_007489866.1| - 0.00042 20.2 1.4 0.024 14.6 0.0 3.1 3 0 0 3 3 3 1 Y_Y_Y domain TcfC PF16967.5 gi|452209752|ref|YP_007489866.1| - 0.018 14.5 0.1 0.089 12.3 0.0 2.1 1 1 1 2 2 2 0 E-set like domain DUF1842 PF08896.10 gi|452209752|ref|YP_007489866.1| - 0.019 15.2 0.1 0.079 13.2 0.1 2.0 2 1 0 2 2 2 0 Domain of unknown function (DUF1842) Big_3_5 PF16640.5 gi|452209753|ref|YP_007489867.1| - 0.041 14.1 2.6 0.058 13.6 0.2 2.5 3 0 0 3 3 3 0 Bacterial Ig-like domain (group 3) Ribosomal_L31 PF01197.18 gi|452209753|ref|YP_007489867.1| - 0.042 14.1 0.1 0.12 12.6 0.0 1.8 2 0 0 2 2 2 0 Ribosomal protein L31 Acylphosphatase PF00708.18 gi|452209754|ref|YP_007489868.1| - 1.3e-22 80.0 0.1 2.2e-22 79.3 0.1 1.3 1 0 0 1 1 1 1 Acylphosphatase HSBP1 PF06825.12 gi|452209754|ref|YP_007489868.1| - 0.0002 21.2 0.9 1.1 9.2 0.1 4.3 1 1 2 3 3 3 2 Heat shock factor binding protein 1 DUF16 PF01519.16 gi|452209754|ref|YP_007489868.1| - 0.035 14.6 0.0 0.62 10.6 0.0 2.6 1 1 0 1 1 1 0 Protein of unknown function DUF16 Collagen_mid PF15984.5 gi|452209754|ref|YP_007489868.1| - 0.044 13.5 0.0 0.076 12.8 0.0 1.3 1 0 0 1 1 1 0 Bacterial collagen, middle region DUF2884 PF11101.8 gi|452209754|ref|YP_007489868.1| - 0.095 12.2 0.1 2.5 7.6 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2884) Fer4_24 PF18109.1 gi|452209754|ref|YP_007489868.1| - 0.14 12.4 0.6 24 5.3 0.0 3.6 1 1 1 3 3 3 0 Ferredoxin I 4Fe-4S cluster domain Polbeta PF18765.1 gi|452209756|ref|YP_007489870.1| - 1.2e-22 79.8 0.1 1.8e-22 79.2 0.1 1.2 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase NTP_transf_2 PF01909.23 gi|452209756|ref|YP_007489870.1| - 1.8e-10 41.0 0.4 3.5e-10 40.1 0.4 1.7 1 1 0 1 1 1 1 Nucleotidyltransferase domain INCENP_N PF12178.8 gi|452209756|ref|YP_007489870.1| - 0.09 12.8 0.1 0.45 10.6 0.0 2.0 2 0 0 2 2 2 0 Chromosome passenger complex (CPC) protein INCENP N terminal DUF294 PF03445.13 gi|452209756|ref|YP_007489870.1| - 0.11 12.3 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 Putative nucleotidyltransferase DUF294 DUF86 PF01934.17 gi|452209757|ref|YP_007489871.1| - 6e-25 87.4 0.1 7e-25 87.2 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF86 Epimerase PF01370.21 gi|452209758|ref|YP_007489872.1| - 3.7e-63 213.2 0.1 5.1e-63 212.7 0.1 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|452209758|ref|YP_007489872.1| - 4e-59 200.7 0.0 4.7e-59 200.5 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|452209758|ref|YP_007489872.1| - 1.3e-24 86.7 0.0 1.7e-24 86.3 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|452209758|ref|YP_007489872.1| - 4.2e-19 68.8 0.0 2.1e-18 66.5 0.0 1.8 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 gi|452209758|ref|YP_007489872.1| - 1.3e-15 57.3 0.0 1.7e-15 56.9 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 gi|452209758|ref|YP_007489872.1| - 4.3e-08 32.7 0.1 0.0003 20.0 0.0 2.6 2 1 0 2 2 2 2 Male sterility protein adh_short PF00106.25 gi|452209758|ref|YP_007489872.1| - 1.6e-07 31.0 0.4 5.2e-07 29.3 0.4 1.9 1 1 0 1 1 1 1 short chain dehydrogenase NAD_binding_10 PF13460.6 gi|452209758|ref|YP_007489872.1| - 2.3e-07 30.9 0.0 4.7e-07 29.9 0.0 1.5 1 1 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 gi|452209758|ref|YP_007489872.1| - 3.9e-06 26.6 0.0 5.4e-06 26.1 0.0 1.2 1 0 0 1 1 1 1 NmrA-like family adh_short_C2 PF13561.6 gi|452209758|ref|YP_007489872.1| - 7.4e-05 22.4 0.0 0.00013 21.6 0.0 1.4 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|452209758|ref|YP_007489872.1| - 0.00084 19.3 0.1 0.002 18.1 0.1 1.6 1 1 0 1 1 1 1 KR domain ApbA PF02558.16 gi|452209758|ref|YP_007489872.1| - 0.0014 18.3 0.0 0.0021 17.7 0.0 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA F420_oxidored PF03807.17 gi|452209758|ref|YP_007489872.1| - 0.013 16.0 0.0 0.026 15.1 0.0 1.5 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent 3HCDH_N PF02737.18 gi|452209758|ref|YP_007489872.1| - 0.015 15.1 0.0 0.027 14.4 0.0 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.14 gi|452209758|ref|YP_007489872.1| - 0.019 14.6 0.6 0.047 13.3 0.3 1.8 2 1 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TrkA_N PF02254.18 gi|452209758|ref|YP_007489872.1| - 0.019 15.2 0.1 0.046 14.0 0.1 1.7 1 1 0 1 1 1 0 TrkA-N domain DUF1188 PF06690.11 gi|452209758|ref|YP_007489872.1| - 0.036 13.6 0.4 0.05 13.1 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1188) Sacchrp_dh_NADP PF03435.18 gi|452209758|ref|YP_007489872.1| - 0.068 13.4 0.2 0.16 12.2 0.1 1.7 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain NAD_binding_8 PF13450.6 gi|452209758|ref|YP_007489872.1| - 0.12 12.6 0.0 0.31 11.3 0.0 1.6 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain DapB_N PF01113.20 gi|452209758|ref|YP_007489872.1| - 0.13 12.4 0.2 0.29 11.3 0.1 1.6 1 1 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus NTP_transf_2 PF01909.23 gi|452209760|ref|YP_007489874.1| - 3.7e-13 49.6 0.1 5.4e-13 49.1 0.1 1.3 2 0 0 2 2 2 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|452209760|ref|YP_007489874.1| - 6.2e-13 48.6 0.0 9.5e-13 48.1 0.0 1.2 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase DNA_pol_B_palm PF14792.6 gi|452209760|ref|YP_007489874.1| - 0.013 15.7 0.0 0.014 15.6 0.0 1.3 1 0 0 1 1 1 0 DNA polymerase beta palm DUF86 PF01934.17 gi|452209761|ref|YP_007489875.1| - 4.2e-27 94.4 0.1 4.9e-27 94.1 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF86 L27_1 PF09058.10 gi|452209761|ref|YP_007489875.1| - 0.11 12.5 0.2 2 8.5 0.1 2.6 3 1 0 3 3 3 0 L27_1 dTDP_sugar_isom PF00908.17 gi|452209763|ref|YP_007489877.1| - 2.1e-58 196.7 0.0 2.5e-58 196.5 0.0 1.1 1 0 0 1 1 1 1 dTDP-4-dehydrorhamnose 3,5-epimerase GDP_Man_Dehyd PF16363.5 gi|452209764|ref|YP_007489878.1| - 1.1e-73 248.5 0.0 1.3e-73 248.3 0.0 1.0 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 gi|452209764|ref|YP_007489878.1| - 1.1e-56 192.0 0.0 1.5e-56 191.6 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.15 gi|452209764|ref|YP_007489878.1| - 1.1e-19 70.7 0.0 7.4e-19 68.0 0.0 1.8 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.19 gi|452209764|ref|YP_007489878.1| - 1.3e-17 63.7 0.1 2e-17 63.1 0.1 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 gi|452209764|ref|YP_007489878.1| - 5.5e-13 48.7 0.0 9.8e-13 47.8 0.0 1.5 1 1 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 gi|452209764|ref|YP_007489878.1| - 5.5e-13 48.7 0.1 1.3e-12 47.5 0.1 1.5 1 1 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.6 gi|452209764|ref|YP_007489878.1| - 7.3e-09 35.8 0.0 1.1e-08 35.3 0.0 1.1 1 0 0 1 1 1 1 NAD(P)H-binding RmlD_sub_bind PF04321.17 gi|452209765|ref|YP_007489879.1| - 1.3e-88 296.8 0.0 1.7e-88 296.5 0.0 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain Epimerase PF01370.21 gi|452209765|ref|YP_007489879.1| - 2.8e-18 66.3 0.0 6.6e-18 65.0 0.0 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|452209765|ref|YP_007489879.1| - 2e-12 47.2 0.0 2.7e-12 46.7 0.0 1.3 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Polysacc_synt_2 PF02719.15 gi|452209765|ref|YP_007489879.1| - 1.7e-10 40.5 0.5 3e-09 36.4 0.0 2.9 1 1 1 3 3 3 1 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.19 gi|452209765|ref|YP_007489879.1| - 1.4e-05 24.3 0.3 8.6e-05 21.7 0.1 2.0 1 1 1 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 gi|452209765|ref|YP_007489879.1| - 1.6e-05 24.2 0.0 5.3e-05 22.5 0.0 1.8 1 1 0 1 1 1 1 Male sterility protein NAD_binding_10 PF13460.6 gi|452209765|ref|YP_007489879.1| - 0.095 12.6 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 NAD(P)H-binding Epimerase_2 PF02350.19 gi|452209766|ref|YP_007489880.1| - 6.1e-44 150.3 0.0 7.7e-44 150.0 0.0 1.0 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase NTP_transferase PF00483.23 gi|452209766|ref|YP_007489880.1| - 8.1e-14 51.8 0.0 1e-13 51.4 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|452209766|ref|YP_007489880.1| - 8.8e-06 26.2 0.0 1.1e-05 25.8 0.0 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain ADH_zinc_N PF00107.26 gi|452209767|ref|YP_007489881.1| - 3.6e-15 56.1 0.5 1.4e-14 54.2 0.0 2.2 2 1 0 2 2 2 1 Zinc-binding dehydrogenase UDPG_MGDP_dh_N PF03721.14 gi|452209767|ref|YP_007489881.1| - 5.6e-06 26.1 0.1 1.2e-05 25.0 0.1 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TrkA_N PF02254.18 gi|452209767|ref|YP_007489881.1| - 0.0011 19.2 0.1 0.0026 18.0 0.1 1.6 1 0 0 1 1 1 1 TrkA-N domain AlaDh_PNT_C PF01262.21 gi|452209767|ref|YP_007489881.1| - 0.0014 18.0 0.4 0.0014 18.0 0.4 1.7 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain 2-Hacid_dh_C PF02826.19 gi|452209767|ref|YP_007489881.1| - 0.0016 17.9 0.1 0.0026 17.2 0.1 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Glu_dehyd_C PF16912.5 gi|452209767|ref|YP_007489881.1| - 0.0066 16.0 0.0 0.012 15.1 0.0 1.4 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus 3HCDH_N PF02737.18 gi|452209767|ref|YP_007489881.1| - 0.0087 16.0 0.1 0.16 11.9 0.1 2.5 3 0 0 3 3 3 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ADH_N PF08240.12 gi|452209767|ref|YP_007489881.1| - 0.12 12.2 3.3 0.3 11.0 0.1 2.3 1 1 0 2 2 2 0 Alcohol dehydrogenase GroES-like domain SQHop_cyclase_C PF13243.6 gi|452209768|ref|YP_007489882.1| - 3.4e-05 23.1 0.0 0.0047 16.1 0.0 2.2 2 0 0 2 2 2 2 Squalene-hopene cyclase C-terminal domain Prenyltrans PF00432.21 gi|452209768|ref|YP_007489882.1| - 0.00019 21.1 0.0 0.0012 18.5 0.0 2.3 2 0 0 2 2 2 1 Prenyltransferase and squalene oxidase repeat Pec_lyase PF09492.10 gi|452209768|ref|YP_007489882.1| - 0.031 13.6 1.0 3.5 6.9 0.0 3.4 2 2 2 4 4 4 0 Pectic acid lyase SQHop_cyclase_N PF13249.6 gi|452209768|ref|YP_007489882.1| - 0.056 12.5 0.0 0.33 10.0 0.0 2.1 3 0 0 3 3 3 0 Squalene-hopene cyclase N-terminal domain Glyco_hydro_88 PF07470.13 gi|452209768|ref|YP_007489882.1| - 0.089 11.9 0.0 0.17 10.9 0.0 1.4 1 0 0 1 1 1 0 Glycosyl Hydrolase Family 88 TED_complement PF07678.14 gi|452209768|ref|YP_007489882.1| - 0.11 11.6 0.0 6.9 5.6 0.0 2.5 2 1 1 3 3 3 0 A-macroglobulin TED domain Glycos_transf_1 PF00534.20 gi|452209769|ref|YP_007489883.1| - 6.2e-20 71.4 0.0 8.9e-20 70.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|452209769|ref|YP_007489883.1| - 2.8e-19 69.9 0.0 5e-19 69.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|452209769|ref|YP_007489883.1| - 3e-10 40.3 0.0 6.1e-10 39.4 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|452209769|ref|YP_007489883.1| - 3.4e-08 33.7 0.0 4.6e-08 33.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_2 PF13477.6 gi|452209769|ref|YP_007489883.1| - 0.16 12.0 0.0 0.27 11.2 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase 4-like Glycos_transf_2 PF00535.26 gi|452209770|ref|YP_007489884.1| - 7.2e-20 71.5 0.0 1.1e-19 70.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|452209770|ref|YP_007489884.1| - 1.4e-07 31.6 0.1 1.8e-07 31.3 0.1 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|452209770|ref|YP_007489884.1| - 0.16 12.5 0.0 0.3 11.6 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 2 Glycos_transf_2 PF00535.26 gi|452209771|ref|YP_007489885.1| - 6e-18 65.2 0.0 8.8e-18 64.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|452209771|ref|YP_007489885.1| - 0.0014 18.6 0.0 0.0018 18.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|452209771|ref|YP_007489885.1| - 0.063 13.8 0.0 0.11 13.0 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 2 DUF1616 PF07760.11 gi|452209773|ref|YP_007489887.1| - 5.1e-108 360.9 0.0 5.9e-108 360.7 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) DUF872 PF05915.12 gi|452209773|ref|YP_007489887.1| - 0.17 12.1 2.4 4.3 7.5 0.5 2.4 2 0 0 2 2 2 0 Eukaryotic protein of unknown function (DUF872) CPBP PF02517.16 gi|452209774|ref|YP_007489888.1| - 1.5e-16 60.5 6.3 1.5e-16 60.5 6.3 3.2 2 1 1 3 3 3 1 CPBP intramembrane metalloprotease SafA PF17073.5 gi|452209774|ref|YP_007489888.1| - 0.04 13.9 0.4 0.39 10.7 0.0 2.6 2 0 0 2 2 2 0 Two-component-system connector protein OCIA PF07051.11 gi|452209774|ref|YP_007489888.1| - 0.082 12.9 1.7 0.48 10.5 0.1 2.7 1 1 1 3 3 3 0 Ovarian carcinoma immunoreactive antigen (OCIA) AglB_L1 PF18079.1 gi|452209778|ref|YP_007489892.1| - 8.3e-05 22.8 0.8 0.019 15.2 0.1 2.5 1 1 1 2 2 2 2 Archaeal glycosylation protein B long peripheral domain Y_Y_Y PF07495.13 gi|452209778|ref|YP_007489892.1| - 0.0045 16.9 0.4 0.12 12.3 0.0 2.8 3 0 0 3 3 3 1 Y_Y_Y domain FlgD_ig PF13860.6 gi|452209778|ref|YP_007489892.1| - 0.0097 15.8 1.3 0.14 12.0 0.2 2.8 1 1 1 2 2 2 1 FlgD Ig-like domain DUF2271 PF10029.9 gi|452209778|ref|YP_007489892.1| - 0.037 13.7 0.0 0.099 12.3 0.0 1.8 2 0 0 2 2 2 0 Predicted periplasmic protein (DUF2271) DUF1616 PF07760.11 gi|452209780|ref|YP_007489894.1| - 8.9e-96 320.7 0.1 1.1e-95 320.5 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) Uroplakin_II PF07353.12 gi|452209780|ref|YP_007489894.1| - 0.074 12.6 1.8 0.074 12.5 0.2 1.7 1 1 0 1 1 1 0 Uroplakin II DUF872 PF05915.12 gi|452209780|ref|YP_007489894.1| - 7.3 6.8 5.9 4.9 7.4 3.1 2.1 1 1 1 2 2 2 0 Eukaryotic protein of unknown function (DUF872) CPBP PF02517.16 gi|452209781|ref|YP_007489895.1| - 5.2e-17 62.0 8.0 5.2e-17 62.0 8.0 2.3 2 1 0 2 2 2 1 CPBP intramembrane metalloprotease Y_Y_Y PF07495.13 gi|452209782|ref|YP_007489896.1| - 0.0053 16.7 0.0 0.024 14.6 0.0 2.2 2 0 0 2 2 2 1 Y_Y_Y domain AglB_L1 PF18079.1 gi|452209782|ref|YP_007489896.1| - 0.021 15.1 0.2 0.16 12.3 0.1 2.3 2 1 0 2 2 2 0 Archaeal glycosylation protein B long peripheral domain DUF2271 PF10029.9 gi|452209782|ref|YP_007489896.1| - 0.065 12.9 0.0 0.13 11.9 0.0 1.6 1 0 0 1 1 1 0 Predicted periplasmic protein (DUF2271) bMG6 PF17962.1 gi|452209782|ref|YP_007489896.1| - 0.11 12.6 0.1 0.35 11.0 0.1 1.8 2 0 0 2 2 2 0 Bacterial macroglobulin domain 6 Filamin PF00630.19 gi|452209782|ref|YP_007489896.1| - 0.12 13.2 0.3 0.99 10.3 0.0 2.3 1 1 1 2 2 2 0 Filamin/ABP280 repeat DUF1624 PF07786.12 gi|452209784|ref|YP_007489898.1| - 2.4e-48 164.6 7.3 2.8e-48 164.4 7.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1624) Ribosomal_S17e PF00833.18 gi|452209788|ref|YP_007489902.1| - 3.7e-15 55.9 2.5 4.2e-15 55.7 2.5 1.0 1 0 0 1 1 1 1 Ribosomal S17 DHDPS PF00701.22 gi|452209789|ref|YP_007489903.1| - 6.5e-98 327.0 0.0 7.2e-98 326.8 0.0 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family ThiG PF05690.14 gi|452209789|ref|YP_007489903.1| - 0.035 13.4 0.1 0.062 12.6 0.1 1.4 1 0 0 1 1 1 0 Thiazole biosynthesis protein ThiG THF_DHG_CYH PF00763.23 gi|452209789|ref|YP_007489903.1| - 0.14 12.4 0.0 18 5.7 0.0 3.0 2 1 1 3 3 3 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DapB_C PF05173.14 gi|452209790|ref|YP_007489904.1| - 9.7e-47 158.0 0.1 1.4e-46 157.5 0.1 1.2 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, C-terminus DapB_N PF01113.20 gi|452209790|ref|YP_007489904.1| - 6.3e-33 113.5 1.9 9.8e-33 112.9 1.9 1.3 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus 3Beta_HSD PF01073.19 gi|452209790|ref|YP_007489904.1| - 0.0085 15.1 0.8 0.012 14.7 0.8 1.3 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family GFO_IDH_MocA PF01408.22 gi|452209790|ref|YP_007489904.1| - 0.077 13.8 0.3 2.4 9.0 0.1 2.3 2 0 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold DUF1673 PF07895.11 gi|452209793|ref|YP_007489907.1| - 2.2e-58 197.7 8.6 2.5e-58 197.5 8.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1673) Phage_holin_2_3 PF16080.5 gi|452209793|ref|YP_007489907.1| - 0.15 11.8 1.3 2.8 7.8 0.1 2.6 2 0 0 2 2 2 0 Bacteriophage holin family HP1 DUF2061 PF09834.9 gi|452209793|ref|YP_007489907.1| - 0.18 12.3 12.0 0.66 10.5 2.6 2.5 1 1 1 2 2 2 0 Predicted membrane protein (DUF2061) DUF1673 PF07895.11 gi|452209794|ref|YP_007489908.1| - 5.6e-54 183.3 9.7 2.2e-47 161.7 3.9 2.6 1 1 1 2 2 2 2 Protein of unknown function (DUF1673) OppC_N PF12911.7 gi|452209794|ref|YP_007489908.1| - 0.0071 16.3 1.8 0.018 15.0 1.8 1.7 1 0 0 1 1 1 1 N-terminal TM domain of oligopeptide transport permease C DUF1889 PF08986.10 gi|452209794|ref|YP_007489908.1| - 0.084 13.3 0.0 0.32 11.4 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1889) DUF872 PF05915.12 gi|452209794|ref|YP_007489908.1| - 0.11 12.7 2.0 0.14 12.3 1.3 1.5 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) DUF1673 PF07895.11 gi|452209795|ref|YP_007489909.1| - 4.2e-37 128.1 2.9 6.5e-37 127.5 2.9 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1673) NMN_transporter PF04973.12 gi|452209795|ref|YP_007489909.1| - 0.011 15.7 5.5 0.014 15.3 5.5 1.1 1 0 0 1 1 1 0 Nicotinamide mononucleotide transporter CPP1-like PF11833.8 gi|452209795|ref|YP_007489909.1| - 0.022 14.4 2.4 0.029 14.0 2.4 1.1 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like AbrB PF05145.12 gi|452209795|ref|YP_007489909.1| - 0.38 9.7 7.4 0.25 10.2 3.4 1.9 1 1 0 2 2 2 0 Transition state regulatory protein AbrB DUF872 PF05915.12 gi|452209795|ref|YP_007489909.1| - 0.47 10.6 7.5 0.095 12.9 2.5 1.9 1 1 1 2 2 2 0 Eukaryotic protein of unknown function (DUF872) DUF2985 PF11204.8 gi|452209795|ref|YP_007489909.1| - 4.5 7.5 10.9 3 8.1 6.1 2.5 2 2 0 2 2 2 0 Protein of unknown function (DUF2985) PyrI PF01948.18 gi|452209796|ref|YP_007489910.1| - 1e-17 64.1 0.3 1.5e-17 63.6 0.3 1.2 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, allosteric domain PyrI_C PF02748.15 gi|452209796|ref|YP_007489910.1| - 3.5e-16 58.8 5.7 4.7e-16 58.4 3.6 2.0 2 0 0 2 2 2 1 Aspartate carbamoyltransferase regulatory chain, metal binding domain OTCace_N PF02729.21 gi|452209797|ref|YP_007489911.1| - 1.3e-46 158.3 0.0 6.4e-46 156.0 0.0 1.9 1 1 1 2 2 2 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.24 gi|452209797|ref|YP_007489911.1| - 1.8e-30 106.1 0.0 2.4e-30 105.7 0.0 1.1 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RraA-like PF03737.15 gi|452209799|ref|YP_007489913.1| - 9.6e-43 145.9 0.6 9.6e-43 145.9 0.6 2.2 2 1 1 3 3 3 1 Aldolase/RraA OMPdecase PF00215.24 gi|452209799|ref|YP_007489913.1| - 2.8e-15 56.5 5.1 8.9e-15 54.9 5.1 1.9 1 1 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family NanE PF04131.14 gi|452209799|ref|YP_007489913.1| - 8.2e-07 28.4 2.0 8.2e-07 28.4 2.0 1.8 2 1 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase His_biosynth PF00977.21 gi|452209799|ref|YP_007489913.1| - 1.5e-05 24.6 2.5 8.8e-05 22.1 1.2 2.3 1 1 1 2 2 2 1 Histidine biosynthesis protein ADH_zinc_N PF00107.26 gi|452209799|ref|YP_007489913.1| - 0.0012 18.8 2.2 0.22 11.5 2.2 2.5 1 1 0 1 1 1 1 Zinc-binding dehydrogenase PdxJ PF03740.13 gi|452209799|ref|YP_007489913.1| - 0.012 14.8 0.2 0.037 13.1 0.0 1.9 2 0 0 2 2 2 0 Pyridoxal phosphate biosynthesis protein PdxJ TPP_enzyme_M PF00205.22 gi|452209799|ref|YP_007489913.1| - 0.02 14.6 0.8 0.81 9.4 0.0 3.1 2 2 1 3 3 3 0 Thiamine pyrophosphate enzyme, central domain Peripla_BP_4 PF13407.6 gi|452209799|ref|YP_007489913.1| - 0.033 13.8 1.5 0.054 13.1 1.5 1.3 1 0 0 1 1 1 0 Periplasmic binding protein domain Ribul_P_3_epim PF00834.19 gi|452209799|ref|YP_007489913.1| - 0.13 11.6 1.9 1.4 8.3 0.3 2.5 2 0 0 2 2 2 0 Ribulose-phosphate 3 epimerase family DUF561 PF04481.12 gi|452209799|ref|YP_007489913.1| - 0.39 9.8 2.2 1.5 7.9 0.6 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF561) Pilin_N PF07790.11 gi|452209800|ref|YP_007489914.1| - 0.087 13.8 0.4 0.17 12.8 0.2 1.7 2 1 0 2 2 2 0 Archaeal Type IV pilin, N-terminal RQC PF09382.10 gi|452209801|ref|YP_007489915.1| - 3.2e-35 120.3 0.0 7.4e-35 119.2 0.0 1.6 1 0 0 1 1 1 1 RQC domain Helicase_C PF00271.31 gi|452209801|ref|YP_007489915.1| - 4.7e-21 75.2 0.1 2.9e-18 66.2 0.0 3.2 3 0 0 3 3 3 1 Helicase conserved C-terminal domain HRDC PF00570.23 gi|452209801|ref|YP_007489915.1| - 5e-20 71.2 0.0 1.2e-19 70.0 0.0 1.6 1 0 0 1 1 1 1 HRDC domain DEAD PF00270.29 gi|452209801|ref|YP_007489915.1| - 3.8e-19 69.1 0.0 1.9e-18 66.9 0.0 2.0 2 0 0 2 2 2 1 DEAD/DEAH box helicase RecQ_Zn_bind PF16124.5 gi|452209801|ref|YP_007489915.1| - 2.9e-17 63.1 2.6 9.5e-17 61.5 2.6 2.0 1 0 0 1 1 1 1 RecQ zinc-binding HTH_40 PF14493.6 gi|452209801|ref|YP_007489915.1| - 2e-10 41.0 0.7 6.7e-10 39.3 0.7 2.0 1 0 0 1 1 1 1 Helix-turn-helix domain Helicase_Sgs1 PF11408.8 gi|452209801|ref|YP_007489915.1| - 1.3e-06 28.3 0.0 3.1e-06 27.2 0.0 1.6 1 0 0 1 1 1 1 Sgs1 RecQ helicase ResIII PF04851.15 gi|452209801|ref|YP_007489915.1| - 0.026 14.5 0.0 0.16 11.9 0.0 2.4 2 1 0 2 2 2 0 Type III restriction enzyme, res subunit Sigma70_r4_2 PF08281.12 gi|452209801|ref|YP_007489915.1| - 0.089 12.5 0.0 0.3 10.8 0.0 1.9 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_24 PF13412.6 gi|452209801|ref|YP_007489915.1| - 0.14 11.8 0.0 0.38 10.3 0.0 1.8 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding GMP_synt_C PF00958.22 gi|452209802|ref|YP_007489916.1| - 1.5e-30 105.1 0.0 3e-30 104.1 0.0 1.5 1 0 0 1 1 1 1 GMP synthase C terminal domain NAD_synthase PF02540.17 gi|452209802|ref|YP_007489916.1| - 7e-09 35.2 0.0 0.00029 20.0 0.0 2.1 2 0 0 2 2 2 2 NAD synthase QueC PF06508.13 gi|452209802|ref|YP_007489916.1| - 0.00062 19.3 0.0 0.0014 18.2 0.0 1.6 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.16 gi|452209802|ref|YP_007489916.1| - 0.0017 17.2 0.0 0.052 12.3 0.0 2.1 2 0 0 2 2 2 1 tRNA methyl transferase PAPS_reduct PF01507.19 gi|452209802|ref|YP_007489916.1| - 0.007 16.4 0.0 0.011 15.8 0.0 1.3 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family ThiI PF02568.14 gi|452209802|ref|YP_007489916.1| - 0.13 11.9 0.1 0.23 11.0 0.0 1.6 2 1 0 2 2 2 0 Thiamine biosynthesis protein (ThiI) Asn_synthase PF00733.21 gi|452209802|ref|YP_007489916.1| - 0.13 11.9 0.0 0.22 11.1 0.0 1.3 1 0 0 1 1 1 0 Asparagine synthase Radical_SAM PF04055.21 gi|452209803|ref|YP_007489917.1| - 1.1e-05 25.9 0.0 2e-05 25.0 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily Pox_A3L PF05288.11 gi|452209803|ref|YP_007489917.1| - 0.062 13.3 0.3 1 9.4 0.0 2.4 2 0 0 2 2 2 0 Poxvirus A3L Protein Radical_SAM_C PF16199.5 gi|452209803|ref|YP_007489917.1| - 0.11 12.5 0.0 0.34 11.0 0.0 1.8 1 0 0 1 1 1 0 Radical_SAM C-terminal domain AA_kinase PF00696.28 gi|452209804|ref|YP_007489918.1| - 1.3e-43 149.4 5.6 1.4e-43 149.2 5.6 1.0 1 0 0 1 1 1 1 Amino acid kinase family MC1 PF05854.11 gi|452209805|ref|YP_007489919.1| - 2.7e-40 136.6 1.2 3.2e-40 136.3 1.2 1.0 1 0 0 1 1 1 1 Non-histone chromosomal protein MC1 GCHY-1 PF02649.14 gi|452209806|ref|YP_007489920.1| - 2.5e-84 282.8 2.8 2.8e-84 282.7 2.8 1.0 1 0 0 1 1 1 1 Type I GTP cyclohydrolase folE2 FolB PF02152.18 gi|452209806|ref|YP_007489920.1| - 0.00069 20.1 0.3 0.089 13.3 0.0 2.9 2 1 0 2 2 2 1 Dihydroneopterin aldolase DUF4820 PF16091.5 gi|452209807|ref|YP_007489921.1| - 0.14 11.6 0.1 0.14 11.5 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) DUF2098 PF09871.9 gi|452209808|ref|YP_007489922.1| - 3.3e-23 81.8 1.3 3.8e-23 81.6 1.3 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2098) DUF2114 PF09887.9 gi|452209809|ref|YP_007489923.1| - 1.8e-232 771.6 6.1 2.1e-232 771.5 6.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2114) FrhB_FdhB_C PF04432.13 gi|452209810|ref|YP_007489924.1| - 1.9e-40 138.2 0.0 1.9e-40 138.2 0.0 1.8 2 0 0 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.13 gi|452209810|ref|YP_007489924.1| - 2.4e-26 91.7 0.3 2.9e-25 88.2 0.1 2.5 3 0 0 3 3 3 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term YHS PF04945.13 gi|452209810|ref|YP_007489924.1| - 2.2e-11 43.7 3.2 4e-11 42.8 2.4 1.9 2 0 0 2 2 2 1 YHS domain Fer4_10 PF13237.6 gi|452209810|ref|YP_007489924.1| - 0.00038 20.5 13.2 0.00038 20.5 10.9 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|452209810|ref|YP_007489924.1| - 0.0021 18.4 14.1 0.072 13.6 1.0 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|452209810|ref|YP_007489924.1| - 0.018 15.2 15.2 0.033 14.4 12.3 2.8 2 1 2 4 4 4 0 4Fe-4S dicluster domain Fer4 PF00037.27 gi|452209810|ref|YP_007489924.1| - 0.074 12.9 18.0 0.17 11.8 3.7 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|452209810|ref|YP_007489924.1| - 0.2 12.2 16.2 1 9.9 1.4 3.1 2 1 3 5 5 5 0 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|452209810|ref|YP_007489924.1| - 0.21 12.2 14.5 0.46 11.1 2.1 3.2 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|452209810|ref|YP_007489924.1| - 0.32 11.5 14.0 1.8 9.1 1.9 2.9 1 1 3 4 4 4 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452209810|ref|YP_007489924.1| - 0.71 10.9 13.0 2.2 9.2 0.8 3.2 3 1 1 4 4 4 0 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 gi|452209810|ref|YP_007489924.1| - 0.79 9.9 17.4 0.098 12.8 2.2 2.9 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_2 PF12797.7 gi|452209810|ref|YP_007489924.1| - 0.95 9.7 18.3 0.59 10.4 2.0 3.3 3 0 0 3 3 3 0 4Fe-4S binding domain zf-FLZ PF04570.14 gi|452209810|ref|YP_007489924.1| - 1.4 8.5 7.3 0.7 9.4 1.6 3.2 3 0 0 3 3 3 0 zinc-finger of the FCS-type, C2-C2 Fer4_21 PF14697.6 gi|452209810|ref|YP_007489924.1| - 2.3 8.4 12.0 8.8 6.5 12.0 2.1 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|452209810|ref|YP_007489924.1| - 2.4 9.0 8.2 13 6.6 1.4 3.0 2 1 1 3 3 2 0 4Fe-4S single cluster domain Glu-tRNAGln PF02686.15 gi|452209811|ref|YP_007489925.1| - 4.3e-17 62.2 0.7 5.6e-17 61.8 0.7 1.2 1 0 0 1 1 1 1 Glu-tRNAGln amidotransferase C subunit Amidase PF01425.21 gi|452209812|ref|YP_007489926.1| - 1.1e-161 538.9 0.0 1.2e-161 538.7 0.0 1.0 1 0 0 1 1 1 1 Amidase GatB_N PF02934.15 gi|452209813|ref|YP_007489927.1| - 7.5e-103 343.6 0.0 1e-102 343.2 0.0 1.1 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.18 gi|452209813|ref|YP_007489927.1| - 6e-49 165.7 0.2 9.1e-49 165.1 0.2 1.3 1 0 0 1 1 1 1 GatB domain CN_hydrolase PF00795.22 gi|452209814|ref|YP_007489928.1| - 3.2e-45 154.5 0.0 3.7e-45 154.3 0.0 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase Methyltransf_31 PF13847.6 gi|452209815|ref|YP_007489929.1| - 6.2e-20 71.5 0.0 7.5e-20 71.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|452209815|ref|YP_007489929.1| - 1.3e-17 64.2 0.0 1.8e-17 63.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|452209815|ref|YP_007489929.1| - 5.1e-14 52.8 0.0 7.1e-14 52.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|452209815|ref|YP_007489929.1| - 3.2e-12 46.6 0.0 3.9e-12 46.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|452209815|ref|YP_007489929.1| - 1.9e-11 44.6 0.0 2.6e-11 44.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|452209815|ref|YP_007489929.1| - 1.3e-08 34.5 0.0 1.6e-08 34.2 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MetW PF07021.12 gi|452209815|ref|YP_007489929.1| - 9e-07 28.7 0.0 1.2e-06 28.3 0.0 1.1 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Fibrillarin PF01269.17 gi|452209815|ref|YP_007489929.1| - 3.4e-06 26.4 0.0 4.1e-06 26.1 0.0 1.2 1 0 0 1 1 1 1 Fibrillarin MTS PF05175.14 gi|452209815|ref|YP_007489929.1| - 2.1e-05 24.2 0.0 2.3e-05 24.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|452209815|ref|YP_007489929.1| - 0.00012 21.6 0.0 0.00013 21.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) TehB PF03848.14 gi|452209815|ref|YP_007489929.1| - 0.00014 21.3 0.0 0.00019 20.9 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB FtsJ PF01728.19 gi|452209815|ref|YP_007489929.1| - 0.00028 21.1 0.0 0.00035 20.8 0.0 1.3 1 1 0 1 1 1 1 FtsJ-like methyltransferase PCMT PF01135.19 gi|452209815|ref|YP_007489929.1| - 0.00042 20.1 0.0 0.00048 19.9 0.0 1.1 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CMAS PF02353.20 gi|452209815|ref|YP_007489929.1| - 0.00097 18.5 0.0 0.0013 18.1 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase FmrO PF07091.11 gi|452209815|ref|YP_007489929.1| - 0.0082 15.7 0.0 0.0089 15.6 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA methyltransferase (FmrO) TPMT PF05724.11 gi|452209815|ref|YP_007489929.1| - 0.018 14.7 0.0 0.022 14.4 0.0 1.2 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) Methyltransf_29 PF03141.16 gi|452209815|ref|YP_007489929.1| - 0.02 13.5 0.0 0.042 12.4 0.0 1.5 1 1 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Met_10 PF02475.16 gi|452209815|ref|YP_007489929.1| - 0.024 14.4 0.0 0.024 14.4 0.0 1.2 1 0 0 1 1 1 0 Met-10+ like-protein GCD14 PF08704.10 gi|452209815|ref|YP_007489929.1| - 0.049 13.3 0.0 0.081 12.6 0.0 1.3 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Methyltransf_24 PF13578.6 gi|452209815|ref|YP_007489929.1| - 0.11 13.6 0.0 0.15 13.1 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Chlorovi_GP_rpt PF06598.11 gi|452209816|ref|YP_007489930.1| - 0.072 13.2 0.8 0.087 12.9 0.8 1.3 1 1 0 1 1 1 0 Chlorovirus glycoprotein repeat RibD_C PF01872.17 gi|452209818|ref|YP_007489932.1| - 3.5e-22 79.2 0.0 1.1e-15 58.0 0.0 2.1 1 1 1 2 2 2 2 RibD C-terminal domain DHFR_1 PF00186.19 gi|452209818|ref|YP_007489932.1| - 4.8e-07 29.6 0.0 7.1e-07 29.1 0.0 1.2 1 0 0 1 1 1 1 Dihydrofolate reductase NTS PF15447.6 gi|452209818|ref|YP_007489932.1| - 0.015 15.8 0.0 0.034 14.6 0.0 1.5 1 0 0 1 1 1 0 N-terminal segments of PfEMP1 Mrr_cat PF04471.12 gi|452209819|ref|YP_007489933.1| - 3.5e-36 123.7 0.0 5.6e-36 123.1 0.0 1.3 1 0 0 1 1 1 1 Restriction endonuclease Mrr_N PF14338.6 gi|452209819|ref|YP_007489933.1| - 6.9e-33 112.6 0.1 1.1e-32 111.9 0.1 1.4 1 0 0 1 1 1 1 Mrr N-terminal domain Mrr_cat_2 PF13156.6 gi|452209819|ref|YP_007489933.1| - 5.9e-11 42.4 0.0 1.7e-10 40.8 0.0 1.7 2 0 0 2 2 2 1 Restriction endonuclease Peptidase_M48 PF01435.18 gi|452209821|ref|YP_007489935.1| - 5.2e-21 75.3 0.1 7.2e-21 74.9 0.1 1.3 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|452209821|ref|YP_007489935.1| - 7.9e-05 22.0 0.0 0.00011 21.5 0.0 1.3 1 0 0 1 1 1 1 BlaR1 peptidase M56 BSP PF04450.12 gi|452209821|ref|YP_007489935.1| - 0.17 11.6 0.0 0.22 11.3 0.0 1.2 1 0 0 1 1 1 0 Peptidase of plants and bacteria DUF4157 PF13699.6 gi|452209821|ref|YP_007489935.1| - 0.44 10.8 1.6 0.88 9.9 1.6 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4157) Thymidylat_synt PF00303.19 gi|452209822|ref|YP_007489936.1| - 9e-22 77.5 0.0 1.3e-21 77.0 0.0 1.2 1 1 0 1 1 1 1 Thymidylate synthase BNR_6 PF15899.5 gi|452209822|ref|YP_007489936.1| - 0.057 13.5 0.0 0.15 12.2 0.0 1.7 1 0 0 1 1 1 0 BNR-Asp box repeat EPSP_synthase PF00275.20 gi|452209823|ref|YP_007489937.1| - 6.9e-110 367.6 1.0 8.3e-110 367.3 1.0 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PrmA PF06325.13 gi|452209824|ref|YP_007489938.1| - 1.3e-05 24.7 0.0 3.5e-05 23.4 0.0 1.6 2 0 0 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 gi|452209824|ref|YP_007489938.1| - 3e-05 23.6 0.0 5.3e-05 22.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 gi|452209824|ref|YP_007489938.1| - 9.5e-05 23.0 0.0 0.0012 19.5 0.0 2.7 3 1 0 3 3 3 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|452209824|ref|YP_007489938.1| - 0.004 16.8 0.0 0.007 16.0 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 AAA_31 PF13614.6 gi|452209824|ref|YP_007489938.1| - 0.076 12.9 0.0 0.22 11.4 0.0 1.8 1 0 0 1 1 1 0 AAA domain MCR_alpha_N PF02745.15 gi|452209825|ref|YP_007489939.1| - 6.5e-145 481.5 1.5 8.4e-145 481.1 1.5 1.1 1 0 0 1 1 1 1 Methyl-coenzyme M reductase alpha subunit, N-terminal domain MCR_alpha PF02249.17 gi|452209825|ref|YP_007489939.1| - 8.1e-66 220.3 4.4 8.1e-66 220.3 4.4 2.1 2 0 0 2 2 2 1 Methyl-coenzyme M reductase alpha subunit, C-terminal domain MCR_gamma PF02240.16 gi|452209826|ref|YP_007489940.1| - 2.3e-108 361.1 0.1 2.5e-108 361.0 0.1 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase gamma subunit MCR_C PF04609.12 gi|452209827|ref|YP_007489941.1| - 6.1e-07 28.8 0.6 7.8e-07 28.4 0.6 1.3 1 1 0 1 1 1 1 Methyl-coenzyme M reductase operon protein C MCR_D PF02505.14 gi|452209828|ref|YP_007489942.1| - 4.8e-57 191.8 0.1 5.6e-57 191.6 0.1 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase operon protein D DUF4426 PF14467.6 gi|452209828|ref|YP_007489942.1| - 0.12 12.4 0.0 0.22 11.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4426) MCR_beta PF02241.18 gi|452209829|ref|YP_007489943.1| - 1.7e-137 457.0 7.5 2.7e-137 456.3 7.5 1.3 1 0 0 1 1 1 1 Methyl-coenzyme M reductase beta subunit, C-terminal domain MCR_beta_N PF02783.15 gi|452209829|ref|YP_007489943.1| - 1.7e-69 233.1 1.5 1.7e-69 233.1 1.5 2.0 2 0 0 2 2 2 1 Methyl-coenzyme M reductase beta subunit, N-terminal domain PolC_DP2 PF03833.13 gi|452209831|ref|YP_007489945.1| - 0 1296.8 0.0 0 1296.1 0.0 1.4 2 0 0 2 2 2 1 DNA polymerase II large subunit DP2 zinc-ribbons_6 PF07191.12 gi|452209831|ref|YP_007489945.1| - 0.0032 17.4 9.7 1.1 9.3 7.1 2.6 2 0 0 2 2 2 2 zinc-ribbons HTH_3 PF01381.22 gi|452209831|ref|YP_007489945.1| - 0.05 13.7 1.0 1.2 9.2 0.0 2.8 2 0 0 2 2 2 0 Helix-turn-helix HypA PF01155.19 gi|452209831|ref|YP_007489945.1| - 1.3 9.0 15.8 0.46 10.5 0.1 3.5 3 1 0 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TerY_C PF15616.6 gi|452209831|ref|YP_007489945.1| - 2 8.5 14.6 0.46 10.6 8.7 2.6 2 1 0 2 2 2 0 TerY-C metal binding domain DZR PF12773.7 gi|452209831|ref|YP_007489945.1| - 3.7 7.7 20.5 0.68 10.0 0.5 3.1 3 1 0 3 3 3 0 Double zinc ribbon MarC PF01914.17 gi|452209832|ref|YP_007489946.1| - 0.0066 15.9 0.5 0.0072 15.7 0.5 1.1 1 0 0 1 1 1 1 MarC family integral membrane protein RuBisCO_large PF00016.20 gi|452209833|ref|YP_007489947.1| - 9.2e-105 350.1 0.1 1.2e-104 349.8 0.1 1.1 1 0 0 1 1 1 1 Ribulose bisphosphate carboxylase large chain, catalytic domain RuBisCO_large_N PF02788.16 gi|452209833|ref|YP_007489947.1| - 3.8e-41 140.0 0.0 1.1e-40 138.6 0.0 1.8 2 0 0 2 2 2 1 Ribulose bisphosphate carboxylase large chain, N-terminal domain DUF1646 PF07854.12 gi|452209834|ref|YP_007489948.1| - 8.3e-132 439.8 29.7 9.8e-132 439.5 29.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1646) DHHC PF01529.20 gi|452209834|ref|YP_007489948.1| - 8.4 6.5 6.6 25 5.0 0.1 3.2 1 1 2 3 3 3 0 DHHC palmitoyltransferase DUF1646 PF07854.12 gi|452209835|ref|YP_007489949.1| - 4.3e-100 335.5 15.9 5e-100 335.3 15.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1646) CitMHS PF03600.16 gi|452209835|ref|YP_007489949.1| - 5.9e-05 22.4 16.5 7.8e-05 22.0 16.5 1.2 1 0 0 1 1 1 1 Citrate transporter DUF1646 PF07854.12 gi|452209837|ref|YP_007489951.1| - 3.3e-130 434.5 25.8 3.8e-130 434.3 25.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1646) AmoC PF04896.12 gi|452209837|ref|YP_007489951.1| - 0.025 13.9 2.1 0.026 13.8 0.6 1.8 2 0 0 2 2 2 0 Ammonia monooxygenase/methane monooxygenase, subunit C ArsA_HSP20 PF17886.1 gi|452209840|ref|YP_007489954.1| - 9.5e-06 25.1 0.0 1.3e-05 24.6 0.0 1.2 1 0 0 1 1 1 1 HSP20-like domain found in ArsA HSP20 PF00011.21 gi|452209840|ref|YP_007489954.1| - 1.7e-05 24.9 0.5 0.00017 21.7 0.1 2.0 1 1 1 2 2 2 1 Hsp20/alpha crystallin family HSP20 PF00011.21 gi|452209841|ref|YP_007489955.1| - 9e-09 35.4 0.3 2.5e-06 27.6 0.3 2.2 1 1 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|452209841|ref|YP_007489955.1| - 2.6e-08 33.3 0.0 3.8e-08 32.8 0.0 1.3 1 0 0 1 1 1 1 HSP20-like domain found in ArsA AAA PF00004.29 gi|452209842|ref|YP_007489956.1| - 2.6e-100 332.0 0.1 1.9e-49 167.5 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|452209842|ref|YP_007489956.1| - 1.3e-32 111.3 1.0 9.6e-16 57.3 0.2 3.0 2 0 0 2 2 2 2 AAA+ lid domain CDC48_N PF02359.18 gi|452209842|ref|YP_007489956.1| - 2.1e-29 101.5 0.7 7.4e-28 96.6 1.2 2.7 2 0 0 2 2 2 1 Cell division protein 48 (CDC48), N-terminal domain AAA_2 PF07724.14 gi|452209842|ref|YP_007489956.1| - 6.1e-17 62.3 0.0 6.3e-07 29.7 0.0 3.2 3 0 0 3 3 2 2 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 gi|452209842|ref|YP_007489956.1| - 2.1e-16 60.1 0.0 5.8e-08 32.6 0.0 3.1 2 2 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 gi|452209842|ref|YP_007489956.1| - 1.7e-15 57.8 0.1 2.2e-06 28.1 0.0 3.5 2 1 1 3 3 3 2 AAA ATPase domain CDC48_2 PF02933.17 gi|452209842|ref|YP_007489956.1| - 4.6e-15 55.2 0.5 1.5e-14 53.5 0.3 2.0 2 0 0 2 2 1 1 Cell division protein 48 (CDC48), domain 2 AAA_5 PF07728.14 gi|452209842|ref|YP_007489956.1| - 1e-12 48.3 1.3 6.7e-05 22.9 0.1 4.0 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) TIP49 PF06068.13 gi|452209842|ref|YP_007489956.1| - 9.9e-12 44.7 0.0 5.3e-05 22.6 0.0 2.5 2 0 0 2 2 2 2 TIP49 P-loop domain AAA_33 PF13671.6 gi|452209842|ref|YP_007489956.1| - 2.2e-11 44.1 0.0 5.6e-05 23.3 0.0 2.8 2 0 0 2 2 2 2 AAA domain AAA_22 PF13401.6 gi|452209842|ref|YP_007489956.1| - 4.2e-11 43.3 2.8 0.00079 19.7 0.0 4.5 3 2 1 4 4 3 2 AAA domain AAA_14 PF13173.6 gi|452209842|ref|YP_007489956.1| - 4.5e-11 42.9 0.0 0.00015 21.8 0.0 2.4 2 0 0 2 2 2 2 AAA domain Sigma54_activat PF00158.26 gi|452209842|ref|YP_007489956.1| - 2.1e-08 34.0 0.1 0.013 15.3 0.0 3.9 2 2 0 2 2 2 2 Sigma-54 interaction domain AAA_18 PF13238.6 gi|452209842|ref|YP_007489956.1| - 1.1e-07 32.4 0.0 0.016 15.8 0.0 2.9 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 gi|452209842|ref|YP_007489956.1| - 1.7e-07 30.9 0.0 0.015 14.7 0.0 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 gi|452209842|ref|YP_007489956.1| - 2.4e-07 30.6 0.0 0.014 15.2 0.0 2.4 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_28 PF13521.6 gi|452209842|ref|YP_007489956.1| - 3.5e-07 30.6 0.8 0.026 14.7 0.0 3.1 3 0 0 3 3 3 2 AAA domain AAA_3 PF07726.11 gi|452209842|ref|YP_007489956.1| - 4e-07 30.0 0.0 0.018 14.9 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 gi|452209842|ref|YP_007489956.1| - 4.4e-07 29.6 0.0 0.018 14.6 0.0 2.8 3 0 0 3 3 2 2 P-loop containing dynein motor region ABC_tran PF00005.27 gi|452209842|ref|YP_007489956.1| - 5.1e-07 30.3 0.0 0.054 14.0 0.0 2.8 2 0 0 2 2 2 2 ABC transporter RNA_helicase PF00910.22 gi|452209842|ref|YP_007489956.1| - 4.1e-06 27.1 0.0 0.092 13.1 0.0 2.6 2 0 0 2 2 2 2 RNA helicase Vps4_C PF09336.10 gi|452209842|ref|YP_007489956.1| - 4.3e-06 26.6 1.4 0.0021 18.0 0.0 3.5 3 0 0 3 3 3 1 Vps4 C terminal oligomerisation domain TsaE PF02367.17 gi|452209842|ref|YP_007489956.1| - 7.7e-06 25.9 0.0 0.13 12.3 0.0 2.9 2 1 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE Zeta_toxin PF06414.12 gi|452209842|ref|YP_007489956.1| - 8.1e-06 25.2 2.5 0.029 13.6 0.0 3.0 3 0 0 3 3 3 2 Zeta toxin DUF815 PF05673.13 gi|452209842|ref|YP_007489956.1| - 8.9e-06 25.0 0.0 0.09 11.9 0.0 2.6 2 0 0 2 2 2 2 Protein of unknown function (DUF815) NACHT PF05729.12 gi|452209842|ref|YP_007489956.1| - 9e-06 25.7 0.3 0.42 10.5 0.0 3.9 2 2 1 3 3 3 2 NACHT domain AAA_24 PF13479.6 gi|452209842|ref|YP_007489956.1| - 1.5e-05 24.8 0.0 0.16 11.7 0.0 2.7 2 0 0 2 2 2 2 AAA domain AAA_25 PF13481.6 gi|452209842|ref|YP_007489956.1| - 2.6e-05 23.9 1.0 1.8 8.1 0.0 4.1 4 0 0 4 4 4 2 AAA domain AAA_17 PF13207.6 gi|452209842|ref|YP_007489956.1| - 2.9e-05 24.5 0.0 0.061 13.7 0.0 3.0 2 0 0 2 2 2 1 AAA domain NB-ARC PF00931.22 gi|452209842|ref|YP_007489956.1| - 4.4e-05 22.8 0.0 0.41 9.8 0.0 2.8 2 1 0 2 2 2 2 NB-ARC domain AAA_30 PF13604.6 gi|452209842|ref|YP_007489956.1| - 6.5e-05 22.7 0.1 0.32 10.7 0.0 2.6 2 0 0 2 2 2 2 AAA domain PhoH PF02562.16 gi|452209842|ref|YP_007489956.1| - 8.1e-05 22.2 0.1 0.25 10.7 0.0 2.7 2 0 0 2 2 2 2 PhoH-like protein AAA_19 PF13245.6 gi|452209842|ref|YP_007489956.1| - 0.0001 22.6 0.7 0.52 10.6 0.0 3.0 2 1 1 3 3 2 2 AAA domain AAA_11 PF13086.6 gi|452209842|ref|YP_007489956.1| - 0.00014 21.7 2.0 0.28 10.9 0.0 3.1 3 0 0 3 3 3 1 AAA domain Sigma54_activ_2 PF14532.6 gi|452209842|ref|YP_007489956.1| - 0.00019 21.6 0.0 0.64 10.1 0.0 2.6 2 0 0 2 2 2 2 Sigma-54 interaction domain Parvo_NS1 PF01057.17 gi|452209842|ref|YP_007489956.1| - 0.00039 19.6 0.0 0.91 8.6 0.0 2.4 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 DUF2075 PF09848.9 gi|452209842|ref|YP_007489956.1| - 0.00059 19.2 0.0 0.59 9.3 0.0 2.3 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) TniB PF05621.11 gi|452209842|ref|YP_007489956.1| - 0.00099 18.6 0.0 0.77 9.1 0.0 3.4 3 1 1 4 4 3 1 Bacterial TniB protein ATPase_2 PF01637.18 gi|452209842|ref|YP_007489956.1| - 0.0014 18.6 3.5 1.4 8.7 0.0 3.8 3 2 1 4 4 3 1 ATPase domain predominantly from Archaea AFG1_ATPase PF03969.16 gi|452209842|ref|YP_007489956.1| - 0.0014 17.6 0.0 0.57 9.0 0.0 2.5 2 0 0 2 2 2 1 AFG1-like ATPase Bac_DnaA PF00308.18 gi|452209842|ref|YP_007489956.1| - 0.0019 18.1 0.0 3.2 7.5 0.0 2.8 2 1 0 2 2 2 0 Bacterial dnaA protein Guanylate_kin PF00625.21 gi|452209842|ref|YP_007489956.1| - 0.003 17.3 0.7 5.7 6.6 0.0 4.3 2 2 1 3 3 3 0 Guanylate kinase ATP-synt_ab PF00006.25 gi|452209842|ref|YP_007489956.1| - 0.0033 17.1 0.0 2.8 7.5 0.0 2.4 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain Viral_helicase1 PF01443.18 gi|452209842|ref|YP_007489956.1| - 0.0046 16.7 0.0 1.8 8.3 0.0 2.5 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase Cytidylate_kin PF02224.18 gi|452209842|ref|YP_007489956.1| - 0.0051 16.6 0.1 1.6 8.4 0.0 2.7 2 0 0 2 2 2 1 Cytidylate kinase NTPase_1 PF03266.15 gi|452209842|ref|YP_007489956.1| - 0.0067 16.4 6.0 5.2 6.9 0.0 4.6 3 2 1 4 4 4 0 NTPase ATPase PF06745.13 gi|452209842|ref|YP_007489956.1| - 0.0079 15.6 8.7 1.9 7.8 0.0 4.6 4 2 2 6 6 5 1 KaiC DUF1677 PF07911.13 gi|452209842|ref|YP_007489956.1| - 0.0087 16.4 0.0 0.87 10.0 0.0 2.7 2 0 0 2 2 2 1 Protein of unknown function (DUF1677) CPT PF07931.12 gi|452209842|ref|YP_007489956.1| - 0.0089 15.9 0.0 1.3 8.8 0.0 2.9 3 0 0 3 3 3 1 Chloramphenicol phosphotransferase-like protein ResIII PF04851.15 gi|452209842|ref|YP_007489956.1| - 0.01 15.8 0.7 3.6 7.6 0.0 3.3 3 2 1 4 4 3 0 Type III restriction enzyme, res subunit Rad17 PF03215.15 gi|452209842|ref|YP_007489956.1| - 0.044 13.7 0.0 17 5.3 0.0 2.8 2 1 0 2 2 2 0 Rad17 P-loop domain AAA_29 PF13555.6 gi|452209842|ref|YP_007489956.1| - 0.044 13.5 0.0 11 5.9 0.0 2.4 2 0 0 2 2 2 0 P-loop containing region of AAA domain Hydin_ADK PF17213.3 gi|452209842|ref|YP_007489956.1| - 0.045 14.0 4.3 0.79 10.0 0.0 3.3 4 0 0 4 4 3 0 Hydin Adenylate kinase-like domain SKI PF01202.22 gi|452209842|ref|YP_007489956.1| - 0.049 13.8 3.8 4.5 7.4 0.0 3.4 3 0 0 3 3 3 0 Shikimate kinase IPT PF01745.16 gi|452209842|ref|YP_007489956.1| - 0.053 12.9 0.1 11 5.3 0.0 2.5 2 0 0 2 2 2 0 Isopentenyl transferase MCM PF00493.23 gi|452209842|ref|YP_007489956.1| - 0.065 12.3 0.0 9.3 5.3 0.0 3.0 2 1 0 2 2 2 0 MCM P-loop domain Torsin PF06309.11 gi|452209842|ref|YP_007489956.1| - 0.083 13.0 0.0 5.3 7.2 0.0 2.5 2 0 0 2 2 2 0 Torsin Cytidylate_kin2 PF13189.6 gi|452209842|ref|YP_007489956.1| - 0.14 12.3 6.2 4.6 7.3 0.0 3.4 4 0 0 4 4 3 0 Cytidylate kinase-like family Zot PF05707.12 gi|452209842|ref|YP_007489956.1| - 0.16 11.6 0.1 28 4.3 0.0 3.5 2 2 1 3 3 3 0 Zonular occludens toxin (Zot) HTH_5 PF01022.20 gi|452209843|ref|YP_007489957.1| - 3e-16 59.0 0.2 1.3e-11 44.1 0.1 2.4 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|452209843|ref|YP_007489957.1| - 2.2e-11 43.6 0.1 9e-08 32.1 0.0 2.5 2 0 0 2 2 2 2 Helix-turn-helix domain MarR_2 PF12802.7 gi|452209843|ref|YP_007489957.1| - 1.2e-07 31.5 0.0 0.016 15.1 0.0 2.4 2 0 0 2 2 2 2 MarR family TrmB PF01978.19 gi|452209843|ref|YP_007489957.1| - 0.00011 22.0 0.0 0.11 12.4 0.0 2.4 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB DprA_WH PF17782.1 gi|452209843|ref|YP_007489957.1| - 0.00021 21.4 0.0 0.00046 20.2 0.0 1.6 1 0 0 1 1 1 1 DprA winged helix domain HTH_34 PF13601.6 gi|452209843|ref|YP_007489957.1| - 0.0005 20.2 0.0 0.05 13.8 0.0 2.5 2 0 0 2 2 2 1 Winged helix DNA-binding domain LexA_DNA_bind PF01726.16 gi|452209843|ref|YP_007489957.1| - 0.00055 19.6 0.0 0.21 11.4 0.0 2.6 2 0 0 2 2 2 1 LexA DNA binding domain HTH_Crp_2 PF13545.6 gi|452209843|ref|YP_007489957.1| - 0.0013 18.7 0.3 0.69 9.9 0.0 2.8 3 0 0 3 3 3 1 Crp-like helix-turn-helix domain DUF4527 PF15030.6 gi|452209843|ref|YP_007489957.1| - 0.0015 18.0 1.3 0.0021 17.6 1.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4527) HTH_27 PF13463.6 gi|452209843|ref|YP_007489957.1| - 0.0026 18.2 0.1 0.58 10.7 0.0 2.7 3 0 0 3 3 3 1 Winged helix DNA-binding domain DUF2513 PF10711.9 gi|452209843|ref|YP_007489957.1| - 0.007 16.6 0.1 0.062 13.6 0.0 2.4 2 1 0 2 2 2 1 Hypothetical protein (DUF2513) MarR PF01047.22 gi|452209843|ref|YP_007489957.1| - 0.013 15.4 0.0 0.13 12.2 0.0 2.3 2 0 0 2 2 2 0 MarR family PadR PF03551.14 gi|452209843|ref|YP_007489957.1| - 0.014 15.4 0.0 2.3 8.2 0.0 3.2 3 1 0 3 3 3 0 Transcriptional regulator PadR-like family HTH_24 PF13412.6 gi|452209843|ref|YP_007489957.1| - 0.015 14.9 4.1 0.019 14.5 0.5 3.1 3 1 0 3 3 3 0 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 gi|452209843|ref|YP_007489957.1| - 0.025 14.5 0.8 0.067 13.1 0.0 2.1 3 0 0 3 3 3 0 HTH domain OmpH PF03938.14 gi|452209843|ref|YP_007489957.1| - 0.026 14.9 0.6 0.037 14.4 0.6 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) DUF742 PF05331.11 gi|452209843|ref|YP_007489957.1| - 0.034 14.0 0.0 2.5 7.9 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF742) HTH_36 PF13730.6 gi|452209843|ref|YP_007489957.1| - 0.05 13.6 0.0 0.14 12.1 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain Rrf2 PF02082.20 gi|452209843|ref|YP_007489957.1| - 0.068 13.5 0.1 0.64 10.4 0.0 2.4 3 0 0 3 3 3 0 Transcriptional regulator HTH_45 PF14947.6 gi|452209843|ref|YP_007489957.1| - 0.092 12.7 0.0 0.91 9.5 0.0 2.5 2 1 1 3 3 3 0 Winged helix-turn-helix CBM_4_9 PF02018.17 gi|452209845|ref|YP_007489959.1| - 0.021 15.1 0.4 0.036 14.3 0.4 1.4 1 0 0 1 1 1 0 Carbohydrate binding domain DDE_Tnp_IS66 PF03050.14 gi|452209847|ref|YP_007489961.1| - 4.6e-11 42.7 0.0 4.9e-11 42.6 0.0 1.0 1 0 0 1 1 1 1 Transposase IS66 family DUF2072 PF09845.9 gi|452209848|ref|YP_007489962.1| - 7.1e-46 155.8 0.1 8.6e-46 155.5 0.1 1.1 1 0 0 1 1 1 1 Zn-ribbon containing protein Zn-ribbon_8 PF09723.10 gi|452209848|ref|YP_007489962.1| - 0.0052 16.9 0.7 0.012 15.8 0.7 1.5 1 0 0 1 1 1 1 Zinc ribbon domain AnfO_nitrog PF09582.10 gi|452209848|ref|YP_007489962.1| - 0.022 14.1 0.7 0.06 12.7 0.7 1.7 1 1 0 1 1 1 0 Iron only nitrogenase protein AnfO (AnfO_nitrog) Prok-RING_1 PF14446.6 gi|452209848|ref|YP_007489962.1| - 0.082 12.8 0.6 0.16 11.9 0.6 1.4 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 zf-ribbon_3 PF13248.6 gi|452209848|ref|YP_007489962.1| - 0.088 12.2 2.8 3.1 7.3 0.7 2.2 2 0 0 2 2 2 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|452209848|ref|YP_007489962.1| - 0.1 12.1 1.1 1.6 8.3 0.1 2.5 2 0 0 2 2 2 0 TFIIB zinc-binding Nudix_N_2 PF14803.6 gi|452209848|ref|YP_007489962.1| - 1.1 9.3 4.1 6.4 6.8 0.4 2.4 1 1 0 1 1 1 0 Nudix N-terminal zinc_ribbon_4 PF13717.6 gi|452209848|ref|YP_007489962.1| - 3.7 7.6 5.4 2.4 8.1 0.7 2.4 2 0 0 2 2 2 0 zinc-ribbon domain Pribosyltran PF00156.27 gi|452209849|ref|YP_007489963.1| - 2.7e-19 69.2 0.0 3.7e-19 68.8 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|452209849|ref|YP_007489963.1| - 0.084 12.3 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase DUF1724 PF08350.10 gi|452209850|ref|YP_007489964.1| - 7.4e-16 58.0 0.1 1.8e-15 56.8 0.1 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) HTH_11 PF08279.12 gi|452209850|ref|YP_007489964.1| - 0.025 14.5 0.1 0.077 13.0 0.1 1.8 1 0 0 1 1 1 0 HTH domain HEPN-like_int PF18867.1 gi|452209850|ref|YP_007489964.1| - 0.028 14.3 0.3 0.072 13.0 0.2 1.8 1 1 0 1 1 1 0 HEPN-like integron domain HTH_45 PF14947.6 gi|452209850|ref|YP_007489964.1| - 0.041 13.9 0.3 0.091 12.8 0.3 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix HTH_27 PF13463.6 gi|452209850|ref|YP_007489964.1| - 0.049 14.1 0.0 0.13 12.8 0.0 1.7 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_20 PF12840.7 gi|452209850|ref|YP_007489964.1| - 0.1 12.7 0.0 0.19 11.8 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain zf-FCS PF06467.14 gi|452209851|ref|YP_007489965.1| - 0.01 15.7 2.9 0.01 15.7 2.9 1.7 2 0 0 2 2 2 0 MYM-type Zinc finger with FCS sequence motif zf-C4_ClpX PF06689.13 gi|452209851|ref|YP_007489965.1| - 0.12 12.2 6.3 0.27 11.1 0.2 2.4 2 0 0 2 2 2 0 ClpX C4-type zinc finger SRP54 PF00448.22 gi|452209852|ref|YP_007489966.1| - 5.3e-71 238.3 0.4 8.4e-71 237.7 0.4 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.19 gi|452209852|ref|YP_007489966.1| - 2.2e-29 102.0 3.1 8.7e-29 100.1 2.3 2.3 2 0 0 2 2 2 1 Signal peptide binding domain SRP54_N PF02881.19 gi|452209852|ref|YP_007489966.1| - 1.6e-23 82.7 0.3 1.7e-20 73.0 0.0 2.8 2 0 0 2 2 2 1 SRP54-type protein, helical bundle domain CbiA PF01656.23 gi|452209852|ref|YP_007489966.1| - 1.3e-06 28.5 0.0 3e-06 27.3 0.0 1.6 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain APS_kinase PF01583.20 gi|452209852|ref|YP_007489966.1| - 0.0003 20.7 0.0 0.00093 19.1 0.0 1.9 1 0 0 1 1 1 1 Adenylylsulphate kinase Zeta_toxin PF06414.12 gi|452209852|ref|YP_007489966.1| - 0.00047 19.5 0.1 0.00093 18.5 0.1 1.4 1 0 0 1 1 1 1 Zeta toxin AAA_33 PF13671.6 gi|452209852|ref|YP_007489966.1| - 0.00071 19.8 0.0 0.0015 18.7 0.0 1.6 1 0 0 1 1 1 1 AAA domain 6PF2K PF01591.18 gi|452209852|ref|YP_007489966.1| - 0.00073 18.9 0.0 0.0016 17.8 0.0 1.5 1 0 0 1 1 1 1 6-phosphofructo-2-kinase AAA_17 PF13207.6 gi|452209852|ref|YP_007489966.1| - 0.0017 18.8 0.8 0.081 13.4 0.1 2.7 2 0 0 2 2 2 1 AAA domain cobW PF02492.19 gi|452209852|ref|YP_007489966.1| - 0.0062 16.1 0.5 0.036 13.7 0.4 2.2 2 1 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain AAA_16 PF13191.6 gi|452209852|ref|YP_007489966.1| - 0.0075 16.7 0.0 0.015 15.7 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain MeaB PF03308.16 gi|452209852|ref|YP_007489966.1| - 0.0091 15.0 0.0 0.025 13.6 0.0 1.7 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB MobB PF03205.14 gi|452209852|ref|YP_007489966.1| - 0.012 15.6 0.1 0.024 14.5 0.1 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B KTI12 PF08433.10 gi|452209852|ref|YP_007489966.1| - 0.012 15.0 0.0 0.027 13.9 0.0 1.5 1 0 0 1 1 1 0 Chromatin associated protein KTI12 Thymidylate_kin PF02223.17 gi|452209852|ref|YP_007489966.1| - 0.013 15.2 0.2 0.053 13.2 0.1 2.1 2 0 0 2 2 2 0 Thymidylate kinase ParA PF10609.9 gi|452209852|ref|YP_007489966.1| - 0.037 13.5 0.0 0.066 12.6 0.0 1.4 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase AAA_22 PF13401.6 gi|452209852|ref|YP_007489966.1| - 0.048 13.9 0.0 0.14 12.4 0.0 1.9 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 gi|452209852|ref|YP_007489966.1| - 0.051 12.8 0.7 6.4 5.9 0.1 2.4 2 0 0 2 2 2 0 NB-ARC domain ATP_bind_1 PF03029.17 gi|452209852|ref|YP_007489966.1| - 0.053 13.3 0.3 0.33 10.7 0.0 2.3 3 0 0 3 3 3 0 Conserved hypothetical ATP binding protein MMR_HSR1 PF01926.23 gi|452209852|ref|YP_007489966.1| - 0.056 13.5 0.1 0.21 11.7 0.1 2.0 1 1 0 1 1 1 0 50S ribosome-binding GTPase PFOR_II PF17147.4 gi|452209852|ref|YP_007489966.1| - 0.091 13.1 0.1 0.97 9.8 0.0 2.6 2 0 0 2 2 2 0 Pyruvate:ferredoxin oxidoreductase core domain II NTPase_1 PF03266.15 gi|452209852|ref|YP_007489966.1| - 0.11 12.5 0.3 0.54 10.2 0.1 2.2 1 1 1 2 2 2 0 NTPase Spectrin PF00435.21 gi|452209852|ref|YP_007489966.1| - 0.14 12.7 0.7 18 5.9 0.0 2.9 3 0 0 3 3 2 0 Spectrin repeat NACHT PF05729.12 gi|452209852|ref|YP_007489966.1| - 0.18 11.7 0.1 0.32 10.9 0.1 1.4 1 0 0 1 1 1 0 NACHT domain AAA_28 PF13521.6 gi|452209852|ref|YP_007489966.1| - 0.21 11.8 0.4 0.63 10.3 0.2 1.9 1 1 1 2 2 2 0 AAA domain DUF3552 PF12072.8 gi|452209853|ref|YP_007489967.1| - 0.08 12.3 0.9 0.11 11.9 0.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) GATase PF00117.28 gi|452209854|ref|YP_007489968.1| - 2.4e-41 141.6 0.0 2.7e-41 141.4 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|452209854|ref|YP_007489968.1| - 2.7e-13 50.2 1.3 7.9e-12 45.4 0.6 2.7 1 1 1 2 2 2 1 Peptidase C26 DeoC PF01791.9 gi|452209855|ref|YP_007489969.1| - 7e-64 215.7 0.1 8e-64 215.5 0.1 1.0 1 0 0 1 1 1 1 DeoC/LacD family aldolase OMPdecase PF00215.24 gi|452209855|ref|YP_007489969.1| - 0.1 12.2 0.1 0.15 11.6 0.1 1.3 1 0 0 1 1 1 0 Orotidine 5'-phosphate decarboxylase / HUMPS family DHQS PF01959.16 gi|452209856|ref|YP_007489970.1| - 9.1e-147 488.6 0.7 1e-146 488.4 0.7 1.0 1 0 0 1 1 1 1 3-dehydroquinate synthase II Peripla_BP_4 PF13407.6 gi|452209856|ref|YP_007489970.1| - 0.0053 16.4 0.7 2.4 7.6 0.0 3.0 3 0 0 3 3 3 2 Periplasmic binding protein domain QRPTase_C PF01729.19 gi|452209856|ref|YP_007489970.1| - 0.045 13.5 0.2 0.11 12.2 0.1 1.6 2 0 0 2 2 2 0 Quinolinate phosphoribosyl transferase, C-terminal domain UPF0086 PF01868.16 gi|452209856|ref|YP_007489970.1| - 0.095 12.6 0.1 0.21 11.5 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function UPF0086 DHquinase_I PF01487.15 gi|452209857|ref|YP_007489971.1| - 3.2e-55 187.9 0.0 3.7e-55 187.7 0.0 1.0 1 0 0 1 1 1 1 Type I 3-dehydroquinase HMGL-like PF00682.19 gi|452209857|ref|YP_007489971.1| - 0.0061 16.2 0.1 1.7 8.1 0.0 2.3 2 0 0 2 2 2 2 HMGL-like dCache_3 PF14827.6 gi|452209857|ref|YP_007489971.1| - 0.018 14.7 0.0 0.3 10.7 0.0 2.1 1 1 0 2 2 2 0 Double sensory domain of two-component sensor kinase Shikimate_dh_N PF08501.11 gi|452209858|ref|YP_007489972.1| - 9.7e-25 86.6 0.0 2.1e-24 85.5 0.0 1.6 1 0 0 1 1 1 1 Shikimate dehydrogenase substrate binding domain SDH_C PF18317.1 gi|452209858|ref|YP_007489972.1| - 1.2e-14 53.8 0.4 2.6e-14 52.7 0.4 1.6 1 0 0 1 1 1 1 Shikimate 5'-dehydrogenase C-terminal domain Shikimate_DH PF01488.20 gi|452209858|ref|YP_007489972.1| - 2e-10 40.8 0.0 3.4e-10 40.1 0.0 1.3 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 gi|452209858|ref|YP_007489972.1| - 0.00019 21.9 0.2 0.00037 21.0 0.2 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 gi|452209858|ref|YP_007489972.1| - 0.00029 20.2 0.3 0.0017 17.7 0.2 2.2 2 1 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 gi|452209858|ref|YP_007489972.1| - 0.0061 17.0 0.1 0.0092 16.4 0.1 1.4 1 0 0 1 1 1 1 Putative NAD(P)-binding adh_short PF00106.25 gi|452209858|ref|YP_007489972.1| - 0.0067 15.9 1.5 0.014 14.9 1.5 1.6 1 1 0 1 1 1 1 short chain dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|452209858|ref|YP_007489972.1| - 0.019 15.3 0.4 0.044 14.1 0.4 1.6 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain ApbA PF02558.16 gi|452209858|ref|YP_007489972.1| - 0.02 14.5 0.2 0.049 13.3 0.2 1.6 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Pyr_redox_3 PF13738.6 gi|452209858|ref|YP_007489972.1| - 0.031 13.5 0.0 0.042 13.1 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase TrkA_N PF02254.18 gi|452209858|ref|YP_007489972.1| - 0.034 14.4 0.5 0.089 13.1 0.5 1.7 1 1 0 1 1 1 0 TrkA-N domain Ldh_1_N PF00056.23 gi|452209858|ref|YP_007489972.1| - 0.053 13.6 0.1 0.1 12.7 0.1 1.5 1 0 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain PDH PF02153.17 gi|452209859|ref|YP_007489973.1| - 3.4e-54 183.6 0.0 4.4e-54 183.2 0.0 1.1 1 0 0 1 1 1 1 Prephenate dehydrogenase NAD_binding_2 PF03446.15 gi|452209859|ref|YP_007489973.1| - 1.3e-09 38.4 0.0 2.5e-09 37.5 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|452209859|ref|YP_007489973.1| - 3.9e-07 30.6 0.0 1.2e-06 29.0 0.0 1.8 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 gi|452209859|ref|YP_007489973.1| - 1.1e-06 28.2 0.1 2.7e-06 26.8 0.0 1.6 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|452209859|ref|YP_007489973.1| - 0.012 15.7 1.8 0.42 10.6 1.8 2.6 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CoA_binding PF02629.19 gi|452209859|ref|YP_007489973.1| - 0.022 15.5 0.2 0.11 13.2 0.1 2.2 2 0 0 2 2 2 0 CoA binding domain ApbA PF02558.16 gi|452209859|ref|YP_007489973.1| - 0.034 13.8 0.1 0.18 11.5 0.1 2.1 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA FDX-ACB PF03147.14 gi|452209859|ref|YP_007489973.1| - 0.038 14.4 0.0 0.084 13.3 0.0 1.5 1 0 0 1 1 1 0 Ferredoxin-fold anticodon binding domain Epimerase PF01370.21 gi|452209859|ref|YP_007489973.1| - 0.04 13.4 0.0 0.069 12.6 0.0 1.5 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family NAD_binding_7 PF13241.6 gi|452209859|ref|YP_007489973.1| - 0.059 13.8 0.0 1.9 9.0 0.0 2.9 3 1 0 3 3 3 0 Putative NAD(P)-binding NmrA PF05368.13 gi|452209859|ref|YP_007489973.1| - 0.12 11.9 0.0 0.24 10.9 0.0 1.5 1 0 0 1 1 1 0 NmrA-like family HEAT_2 PF13646.6 gi|452209860|ref|YP_007489974.1| - 2e-47 159.5 4.4 7e-13 48.8 0.0 6.9 3 2 4 7 7 7 6 HEAT repeats HEAT_PBS PF03130.16 gi|452209860|ref|YP_007489974.1| - 7.6e-39 128.4 1.0 0.0011 19.4 0.0 10.8 10 0 0 10 10 10 7 PBS lyase HEAT-like repeat HEAT PF02985.22 gi|452209860|ref|YP_007489974.1| - 2.8e-12 45.8 0.0 0.022 15.0 0.0 7.1 9 0 0 9 9 9 3 HEAT repeat HEAT_EZ PF13513.6 gi|452209860|ref|YP_007489974.1| - 1.4e-07 31.9 6.1 0.01 16.3 0.1 6.7 7 1 0 7 7 7 1 HEAT-like repeat Vitellogenin_N PF01347.22 gi|452209860|ref|YP_007489974.1| - 5.8e-07 28.3 0.0 0.0004 18.9 0.0 2.5 1 1 1 2 2 2 2 Lipoprotein amino terminal region Cnd1 PF12717.7 gi|452209860|ref|YP_007489974.1| - 8e-05 22.7 0.1 0.65 10.0 0.0 4.5 3 1 1 4 4 4 1 non-SMC mitotic condensation complex subunit 1 Telomere_reg-2 PF10193.9 gi|452209860|ref|YP_007489974.1| - 0.095 13.1 0.0 8.3 6.9 0.0 3.1 3 0 0 3 3 3 0 Telomere length regulation protein Arm PF00514.23 gi|452209860|ref|YP_007489974.1| - 0.12 12.5 0.0 78 3.5 0.0 4.6 7 0 0 7 7 7 0 Armadillo/beta-catenin-like repeat ATP-synt_8 PF00895.20 gi|452209860|ref|YP_007489974.1| - 0.33 11.4 1.5 0.7 10.4 1.5 1.5 1 0 0 1 1 1 0 ATP synthase protein 8 Methyltransf_11 PF08241.12 gi|452209861|ref|YP_007489975.1| - 1.5e-25 89.7 0.0 2.7e-25 88.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|452209861|ref|YP_007489975.1| - 6.1e-24 84.6 0.0 9.8e-24 83.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|452209861|ref|YP_007489975.1| - 4.7e-21 75.2 0.0 6.8e-21 74.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|452209861|ref|YP_007489975.1| - 2.9e-16 59.5 0.0 6e-16 58.5 0.0 1.5 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|452209861|ref|YP_007489975.1| - 1.5e-14 54.2 0.0 1.7e-14 54.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|452209861|ref|YP_007489975.1| - 1.3e-13 51.6 0.0 2e-13 50.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|452209861|ref|YP_007489975.1| - 2.8e-08 33.5 0.0 4.2e-08 32.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain NodS PF05401.11 gi|452209861|ref|YP_007489975.1| - 2e-06 27.6 0.0 3.5e-06 26.8 0.0 1.3 1 0 0 1 1 1 1 Nodulation protein S (NodS) PrmA PF06325.13 gi|452209861|ref|YP_007489975.1| - 0.00013 21.4 0.0 0.00019 21.0 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) DREV PF05219.12 gi|452209861|ref|YP_007489975.1| - 0.00049 19.3 0.0 0.00074 18.7 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase RrnaAD PF00398.20 gi|452209861|ref|YP_007489975.1| - 0.00077 18.6 0.0 0.0011 18.1 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_2 PF00891.18 gi|452209861|ref|YP_007489975.1| - 0.0013 18.1 0.0 0.0018 17.6 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase domain Methyltransf_32 PF13679.6 gi|452209861|ref|YP_007489975.1| - 0.0029 17.6 0.0 0.004 17.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|452209861|ref|YP_007489975.1| - 0.0048 16.7 0.0 0.013 15.3 0.0 1.7 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MetW PF07021.12 gi|452209861|ref|YP_007489975.1| - 0.005 16.5 0.0 0.021 14.4 0.0 1.8 1 1 1 2 2 2 1 Methionine biosynthesis protein MetW Methyltransf_18 PF12847.7 gi|452209861|ref|YP_007489975.1| - 0.011 15.7 0.0 0.018 15.0 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_9 PF08003.11 gi|452209861|ref|YP_007489975.1| - 0.015 14.3 0.0 0.02 13.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) Methyltransf_15 PF09445.10 gi|452209861|ref|YP_007489975.1| - 0.022 14.3 0.0 0.031 13.9 0.0 1.4 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase UPF0020 PF01170.18 gi|452209861|ref|YP_007489975.1| - 0.023 14.4 0.0 0.039 13.6 0.0 1.3 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 DUF5644 PF18712.1 gi|452209861|ref|YP_007489975.1| - 0.055 13.5 0.0 0.099 12.7 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5644) GidB PF02527.15 gi|452209861|ref|YP_007489975.1| - 0.069 12.5 0.0 0.11 11.8 0.0 1.3 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G TehB PF03848.14 gi|452209861|ref|YP_007489975.1| - 0.079 12.4 0.0 0.15 11.5 0.0 1.4 1 0 0 1 1 1 0 Tellurite resistance protein TehB TIM PF00121.18 gi|452209862|ref|YP_007489976.1| - 1.1e-11 44.6 0.0 1.5e-11 44.1 0.0 1.2 1 0 0 1 1 1 1 Triosephosphate isomerase ThiG PF05690.14 gi|452209862|ref|YP_007489976.1| - 0.00011 21.6 0.4 0.00023 20.5 0.2 1.6 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG NMO PF03060.15 gi|452209862|ref|YP_007489976.1| - 0.0027 17.2 0.7 0.0045 16.4 0.7 1.3 1 0 0 1 1 1 1 Nitronate monooxygenase FMN_dh PF01070.18 gi|452209862|ref|YP_007489976.1| - 0.025 13.6 1.4 0.03 13.3 0.3 1.6 2 0 0 2 2 2 0 FMN-dependent dehydrogenase His_biosynth PF00977.21 gi|452209862|ref|YP_007489976.1| - 0.044 13.2 0.1 0.16 11.4 0.0 1.8 2 0 0 2 2 2 0 Histidine biosynthesis protein Hydrolase_like PF13242.6 gi|452209862|ref|YP_007489976.1| - 0.045 13.8 0.1 4.5 7.4 0.0 2.3 2 0 0 2 2 2 0 HAD-hyrolase-like IGPS PF00218.21 gi|452209862|ref|YP_007489976.1| - 0.049 12.8 0.0 0.094 11.9 0.0 1.6 1 1 0 1 1 1 0 Indole-3-glycerol phosphate synthase Fae PF08714.11 gi|452209863|ref|YP_007489977.1| - 4.9e-72 241.1 0.1 9.8e-72 240.1 0.1 1.5 1 0 0 1 1 1 1 Formaldehyde-activating enzyme (Fae) OMPdecase PF00215.24 gi|452209863|ref|YP_007489977.1| - 2.6e-20 73.0 2.7 2.3e-19 69.9 2.7 2.2 1 1 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family Ribul_P_3_epim PF00834.19 gi|452209863|ref|YP_007489977.1| - 0.0015 17.9 3.1 0.0018 17.7 1.3 2.1 2 1 0 2 2 2 1 Ribulose-phosphate 3 epimerase family QRPTase_C PF01729.19 gi|452209863|ref|YP_007489977.1| - 0.0048 16.7 0.2 0.01 15.6 0.2 1.6 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain Cas_csx3 PF09620.10 gi|452209863|ref|YP_007489977.1| - 0.028 14.3 0.1 5.1 7.1 0.1 2.8 1 1 1 2 2 2 0 CRISPR-associated protein (Cas_csx3) PcrB PF01884.17 gi|452209863|ref|YP_007489977.1| - 0.081 12.4 1.7 0.22 11.0 0.2 2.0 1 1 1 2 2 2 0 PcrB family HhH-GPD PF00730.25 gi|452209864|ref|YP_007489978.1| - 4.7e-24 84.9 0.0 6.2e-24 84.5 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|452209864|ref|YP_007489978.1| - 2.3e-10 39.8 0.0 2.3e-09 36.6 0.0 2.4 2 1 0 2 2 2 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|452209864|ref|YP_007489978.1| - 4.5e-05 24.0 0.1 0.23 12.1 0.0 2.4 1 1 2 3 3 3 3 Helix-hairpin-helix domain EndIII_4Fe-2S PF10576.9 gi|452209864|ref|YP_007489978.1| - 0.00013 22.1 3.7 0.00013 22.1 3.7 1.8 2 0 0 2 2 2 1 Iron-sulfur binding domain of endonuclease III HHH_2 PF12826.7 gi|452209864|ref|YP_007489978.1| - 0.00041 20.4 0.0 0.28 11.3 0.0 2.3 2 0 0 2 2 2 2 Helix-hairpin-helix motif DUF2400 PF09674.10 gi|452209864|ref|YP_007489978.1| - 0.1 12.6 0.0 0.38 10.7 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2400) Yip1 PF04893.17 gi|452209865|ref|YP_007489979.1| - 2.8e-24 85.7 19.1 2.8e-24 85.7 19.1 1.3 1 1 0 1 1 1 1 Yip1 domain DUF1282 PF06930.12 gi|452209865|ref|YP_007489979.1| - 0.0048 16.7 12.9 0.027 14.3 12.8 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF1282) FeoB_associated PF12669.7 gi|452209865|ref|YP_007489979.1| - 5.9 7.4 9.4 11 6.5 1.6 2.7 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein B12D PF06522.11 gi|452209865|ref|YP_007489979.1| - 7.3 6.5 10.3 12 5.8 2.3 2.6 2 0 0 2 2 2 0 NADH-ubiquinone reductase complex 1 MLRQ subunit Ferritin PF00210.24 gi|452209867|ref|YP_007489981.1| - 3e-37 127.7 2.6 3.4e-37 127.5 2.6 1.0 1 0 0 1 1 1 1 Ferritin-like domain Rubrerythrin PF02915.17 gi|452209867|ref|YP_007489981.1| - 2.5e-05 24.7 3.5 3.3e-05 24.3 3.5 1.2 1 0 0 1 1 1 1 Rubrerythrin DUF892 PF05974.12 gi|452209867|ref|YP_007489981.1| - 0.0001 22.3 1.0 0.00015 21.8 0.1 1.7 2 1 0 1 1 1 1 Domain of unknown function (DUF892) INTS5_N PF14837.6 gi|452209867|ref|YP_007489981.1| - 0.013 15.1 0.0 0.016 14.8 0.0 1.1 1 0 0 1 1 1 0 Integrator complex subunit 5 N-terminus COQ7 PF03232.13 gi|452209867|ref|YP_007489981.1| - 0.038 13.8 1.9 0.3 10.8 0.1 2.1 2 0 0 2 2 2 0 Ubiquinone biosynthesis protein COQ7 HMGL-like PF00682.19 gi|452209868|ref|YP_007489982.1| - 2.6e-87 292.7 1.9 4.5e-87 292.0 1.9 1.4 1 0 0 1 1 1 1 HMGL-like LeuA_dimer PF08502.10 gi|452209868|ref|YP_007489982.1| - 1.2e-32 112.6 1.6 3.2e-32 111.2 1.6 1.8 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain TatD_DNase PF01026.21 gi|452209869|ref|YP_007489983.1| - 1.3e-55 188.5 0.0 1.6e-55 188.3 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase Amidohydro_2 PF04909.14 gi|452209869|ref|YP_007489983.1| - 0.053 13.3 0.1 0.12 12.2 0.1 1.7 1 1 0 1 1 1 0 Amidohydrolase Lactamase_B PF00753.27 gi|452209870|ref|YP_007489984.1| - 4.5e-25 88.8 0.1 5.7e-25 88.5 0.1 1.0 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|452209870|ref|YP_007489984.1| - 7.4e-07 28.9 0.0 1e-06 28.4 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 gi|452209870|ref|YP_007489984.1| - 0.005 16.3 0.1 0.0071 15.8 0.1 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain RMMBL PF07521.12 gi|452209870|ref|YP_007489984.1| - 0.037 14.0 0.1 0.083 12.8 0.1 1.6 1 0 0 1 1 1 0 Zn-dependent metallo-hydrolase RNA specificity domain Radical_SAM_N PF08497.10 gi|452209871|ref|YP_007489985.1| - 2.8e-129 430.6 0.0 3.8e-129 430.2 0.0 1.2 1 0 0 1 1 1 1 Radical SAM N-terminal DUF3362 PF11842.8 gi|452209871|ref|YP_007489985.1| - 4.1e-31 108.3 0.2 4.1e-31 108.3 0.2 2.3 3 0 0 3 3 3 1 Domain of unknown function (DUF3362) Radical_SAM PF04055.21 gi|452209871|ref|YP_007489985.1| - 1.2e-17 64.8 1.4 1.3e-16 61.5 0.3 2.9 3 0 0 3 3 3 1 Radical SAM superfamily B12-binding PF02310.19 gi|452209871|ref|YP_007489985.1| - 0.00015 21.8 0.0 0.99 9.5 0.0 3.7 4 1 0 4 4 4 2 B12 binding domain CCG PF02754.16 gi|452209874|ref|YP_007489988.1| - 3.9e-34 116.7 1.2 1e-15 57.7 0.1 2.7 2 0 0 2 2 2 2 Cysteine-rich domain Fer4_8 PF13183.6 gi|452209874|ref|YP_007489988.1| - 3.1e-10 40.4 3.1 3.1e-10 40.4 3.1 2.4 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|452209874|ref|YP_007489988.1| - 1e-09 38.8 3.4 1e-09 38.8 3.4 3.1 4 0 0 4 4 3 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|452209874|ref|YP_007489988.1| - 8.1e-08 32.7 5.9 8.1e-08 32.7 5.9 2.4 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|452209874|ref|YP_007489988.1| - 9.5e-07 28.8 8.2 9.5e-07 28.8 8.2 2.9 3 1 0 3 3 3 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452209874|ref|YP_007489988.1| - 1.2e-06 28.6 18.3 7.2e-06 26.1 9.2 3.3 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452209874|ref|YP_007489988.1| - 5.5e-06 27.2 12.3 0.0078 17.1 0.2 3.5 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|452209874|ref|YP_007489988.1| - 0.00026 20.9 2.6 0.00026 20.9 2.6 3.4 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|452209874|ref|YP_007489988.1| - 0.00047 20.3 10.6 0.062 13.5 1.8 2.9 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|452209874|ref|YP_007489988.1| - 0.00084 19.1 24.6 0.0031 17.3 3.7 3.0 3 0 0 3 3 2 2 4Fe-4S binding domain UPF0004 PF00919.20 gi|452209874|ref|YP_007489988.1| - 0.0018 18.3 0.0 1.4 9.0 0.0 3.2 2 1 1 3 3 3 2 Uncharacterized protein family UPF0004 Fer4_4 PF12800.7 gi|452209874|ref|YP_007489988.1| - 0.005 17.3 2.2 0.005 17.3 2.2 4.0 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|452209874|ref|YP_007489988.1| - 0.0073 16.4 15.9 0.013 15.7 0.9 3.6 4 0 0 4 4 4 2 4Fe-4S dicluster domain Tetraspanin PF00335.20 gi|452209874|ref|YP_007489988.1| - 0.088 12.5 0.1 10 5.8 0.1 2.4 2 0 0 2 2 2 0 Tetraspanin family Eapp_C PF10238.9 gi|452209874|ref|YP_007489988.1| - 1 9.5 6.0 0.3 11.1 1.4 2.4 3 0 0 3 3 3 0 E2F-associated phosphoprotein FAD-oxidase_C PF02913.19 gi|452209875|ref|YP_007489989.1| - 5e-58 196.7 0.0 6.3e-58 196.3 0.0 1.1 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 gi|452209875|ref|YP_007489989.1| - 5e-46 155.9 0.1 8.9e-46 155.1 0.1 1.4 1 0 0 1 1 1 1 FAD binding domain DUF2545 PF10810.8 gi|452209876|ref|YP_007489990.1| - 0.067 13.3 1.2 0.074 13.2 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2545) DUF5591 PF17884.1 gi|452209877|ref|YP_007489991.1| - 3.2e-61 205.7 0.4 5.8e-61 204.9 0.1 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF5591) TGT PF01702.18 gi|452209877|ref|YP_007489991.1| - 8.3e-17 61.4 0.0 8e-16 58.1 0.0 2.3 3 0 0 3 3 3 1 Queuine tRNA-ribosyltransferase PUA PF01472.20 gi|452209877|ref|YP_007489991.1| - 9.8e-13 47.9 0.3 2e-12 46.9 0.3 1.5 1 0 0 1 1 1 1 PUA domain TGT_C2 PF14810.6 gi|452209877|ref|YP_007489991.1| - 9.5e-11 41.7 0.0 2e-10 40.7 0.0 1.5 1 0 0 1 1 1 1 Patch-forming domain C2 of tRNA-guanine transglycosylase Acetyltransf_1 PF00583.25 gi|452209878|ref|YP_007489992.1| - 1.6e-19 70.2 0.5 2.2e-19 69.8 0.5 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|452209878|ref|YP_007489992.1| - 2.1e-16 60.0 0.4 3e-16 59.5 0.4 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|452209878|ref|YP_007489992.1| - 1.3e-14 54.4 1.6 1.8e-14 53.9 1.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|452209878|ref|YP_007489992.1| - 2.7e-10 41.0 0.0 3.8e-10 40.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|452209878|ref|YP_007489992.1| - 2.8e-09 36.8 0.1 4.4e-09 36.2 0.1 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 gi|452209878|ref|YP_007489992.1| - 1.3e-07 31.9 0.2 2.7e-07 30.9 0.2 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|452209878|ref|YP_007489992.1| - 1.9e-07 31.2 0.1 3.2e-06 27.2 0.1 2.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|452209878|ref|YP_007489992.1| - 3.1e-05 24.0 0.1 5.5e-05 23.2 0.1 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase GNAT_acetyltran PF12746.7 gi|452209878|ref|YP_007489992.1| - 0.0015 18.2 0.0 0.0019 17.8 0.0 1.1 1 0 0 1 1 1 1 GNAT acetyltransferase Acetyltransf_8 PF13523.6 gi|452209878|ref|YP_007489992.1| - 0.005 16.5 0.0 0.013 15.2 0.0 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 gi|452209878|ref|YP_007489992.1| - 0.035 13.6 0.0 0.1 12.1 0.0 1.7 1 1 0 1 1 1 0 Putative acetyl-transferase Acetyltransf_6 PF13480.7 gi|452209878|ref|YP_007489992.1| - 0.037 14.2 0.0 0.056 13.6 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Toprim_4 PF13662.6 gi|452209880|ref|YP_007489994.1| - 1.8e-11 44.3 0.1 6.1e-11 42.6 0.1 2.0 1 0 0 1 1 1 1 Toprim domain Toprim_2 PF13155.6 gi|452209880|ref|YP_007489994.1| - 7e-05 23.2 0.0 0.00019 21.8 0.0 1.8 1 0 0 1 1 1 1 Toprim-like Toprim PF01751.22 gi|452209880|ref|YP_007489994.1| - 0.057 13.7 0.1 0.22 11.7 0.1 2.1 1 1 0 1 1 1 0 Toprim domain Pyr_redox_2 PF07992.14 gi|452209882|ref|YP_007489996.1| - 6.9e-46 156.8 0.1 8.7e-46 156.5 0.1 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|452209882|ref|YP_007489996.1| - 2.5e-21 76.0 9.1 9.1e-18 64.6 0.1 3.8 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|452209882|ref|YP_007489996.1| - 7.3e-15 55.0 0.0 3e-10 39.9 0.0 2.5 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|452209882|ref|YP_007489996.1| - 1.8e-12 47.6 2.7 0.00038 20.1 2.0 4.0 3 1 1 4 4 4 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|452209882|ref|YP_007489996.1| - 5.2e-09 36.2 0.2 0.0011 19.2 0.0 2.4 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 gi|452209882|ref|YP_007489996.1| - 5.5e-09 35.2 0.1 0.061 12.0 0.0 3.5 4 0 0 4 4 4 3 HI0933-like protein GIDA PF01134.22 gi|452209882|ref|YP_007489996.1| - 8.7e-08 31.6 1.0 0.00014 21.1 0.3 3.3 3 1 1 4 4 4 1 Glucose inhibited division protein A FAD_binding_2 PF00890.24 gi|452209882|ref|YP_007489996.1| - 9.5e-08 31.5 0.2 0.0049 16.0 0.0 2.7 3 0 0 3 3 3 2 FAD binding domain FAD_binding_3 PF01494.19 gi|452209882|ref|YP_007489996.1| - 2e-06 27.3 0.3 0.0009 18.6 0.1 2.2 2 0 0 2 2 2 2 FAD binding domain NAD_binding_7 PF13241.6 gi|452209882|ref|YP_007489996.1| - 2.2e-05 24.8 0.1 0.089 13.2 0.0 2.3 2 0 0 2 2 2 2 Putative NAD(P)-binding Thi4 PF01946.17 gi|452209882|ref|YP_007489996.1| - 5.7e-05 22.5 0.1 0.04 13.2 0.0 2.3 2 0 0 2 2 2 2 Thi4 family NAD_binding_9 PF13454.6 gi|452209882|ref|YP_007489996.1| - 6.6e-05 22.9 0.9 3.9 7.4 0.0 4.0 3 1 0 4 4 4 1 FAD-NAD(P)-binding K_oxygenase PF13434.6 gi|452209882|ref|YP_007489996.1| - 0.00029 20.1 0.0 0.013 14.7 0.0 2.4 2 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) ApbA PF02558.16 gi|452209882|ref|YP_007489996.1| - 0.00093 18.9 0.4 0.033 13.9 0.0 2.4 2 1 0 2 2 2 1 Ketopantoate reductase PanE/ApbA Trp_halogenase PF04820.14 gi|452209882|ref|YP_007489996.1| - 0.0012 17.7 0.1 0.13 11.1 0.0 2.2 2 0 0 2 2 2 1 Tryptophan halogenase Sacchrp_dh_NADP PF03435.18 gi|452209882|ref|YP_007489996.1| - 0.0025 18.1 0.7 0.054 13.7 0.0 2.3 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain 3HCDH_N PF02737.18 gi|452209882|ref|YP_007489996.1| - 0.0029 17.5 0.1 0.037 13.9 0.0 2.2 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.21 gi|452209882|ref|YP_007489996.1| - 0.0033 16.8 0.0 0.54 9.5 0.0 2.3 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain FAD_oxidored PF12831.7 gi|452209882|ref|YP_007489996.1| - 0.0054 16.1 3.1 0.067 12.5 0.2 2.3 2 0 0 2 2 2 1 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 gi|452209882|ref|YP_007489996.1| - 0.0066 15.5 0.1 3 6.8 0.0 2.3 2 0 0 2 2 2 2 Lycopene cyclase protein 2-Hacid_dh_C PF02826.19 gi|452209882|ref|YP_007489996.1| - 0.0075 15.6 1.2 2.7 7.3 0.0 2.5 2 1 0 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|452209882|ref|YP_007489996.1| - 0.011 16.0 0.3 2.4 8.5 0.1 2.4 2 0 0 2 2 2 0 TrkA-N domain Glu_dehyd_C PF16912.5 gi|452209882|ref|YP_007489996.1| - 0.013 15.0 0.1 2 7.9 0.0 2.7 3 1 1 4 4 3 0 Glucose dehydrogenase C-terminus NAD_Gly3P_dh_N PF01210.23 gi|452209882|ref|YP_007489996.1| - 0.019 15.0 0.2 5.5 7.0 0.0 2.5 2 1 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus UDPG_MGDP_dh_N PF03721.14 gi|452209882|ref|YP_007489996.1| - 0.019 14.6 0.6 0.26 10.8 0.1 2.1 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Shikimate_DH PF01488.20 gi|452209882|ref|YP_007489996.1| - 0.022 14.8 0.0 5.1 7.2 0.0 2.4 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase PALP PF00291.25 gi|452209882|ref|YP_007489996.1| - 0.1 12.0 0.0 0.79 9.1 0.0 2.3 3 0 0 3 3 3 0 Pyridoxal-phosphate dependent enzyme F420_oxidored PF03807.17 gi|452209882|ref|YP_007489996.1| - 0.11 13.1 0.2 14 6.3 0.0 2.7 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent ThiF PF00899.21 gi|452209882|ref|YP_007489996.1| - 0.13 11.6 0.1 1.5 8.1 0.1 2.2 2 0 0 2 2 2 0 ThiF family IlvN PF07991.12 gi|452209882|ref|YP_007489996.1| - 0.13 11.8 0.0 4.5 6.8 0.0 2.2 2 0 0 2 2 2 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain RTC PF01137.21 gi|452209883|ref|YP_007489997.1| - 8.3e-85 283.5 0.0 9.4e-85 283.3 0.0 1.0 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase RTC_insert PF05189.13 gi|452209883|ref|YP_007489997.1| - 1.2e-14 54.6 0.0 2.3e-14 53.7 0.0 1.4 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase (RTC), insert domain PTS_2-RNA PF01885.16 gi|452209884|ref|YP_007489998.1| - 7e-22 78.3 0.0 8.5e-22 78.1 0.0 1.0 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family Phlebovirus_G1 PF07243.11 gi|452209884|ref|YP_007489998.1| - 0.0033 15.9 0.0 0.004 15.6 0.0 1.1 1 0 0 1 1 1 1 Phlebovirus glycoprotein G1 tRNA_anti-codon PF01336.25 gi|452209885|ref|YP_007489999.1| - 9.1e-31 105.7 12.7 4.4e-07 29.8 0.1 4.4 4 0 0 4 4 4 4 OB-fold nucleic acid binding domain CDC24_OB3 PF17244.2 gi|452209885|ref|YP_007489999.1| - 1.8e-20 73.7 4.4 0.00017 21.4 0.1 4.1 4 0 0 4 4 4 4 Cell division control protein 24, OB domain 3 REPA_OB_2 PF16900.5 gi|452209885|ref|YP_007489999.1| - 6.4e-12 45.3 6.7 0.0059 16.5 0.0 4.4 4 0 0 4 4 4 4 Replication protein A OB domain DUF3127 PF11325.8 gi|452209885|ref|YP_007489999.1| - 0.0002 21.5 5.8 3 8.1 0.1 4.9 4 1 0 4 4 4 2 Domain of unknown function (DUF3127) Rep_fac-A_C PF08646.10 gi|452209885|ref|YP_007489999.1| - 0.0006 19.6 1.1 22 4.8 0.0 4.1 4 0 0 4 4 4 1 Replication factor-A C terminal domain tRNA_anti_2 PF13742.6 gi|452209885|ref|YP_007489999.1| - 0.0068 16.6 0.3 31 4.9 0.0 3.9 4 0 0 4 4 4 0 OB-fold nucleic acid binding domain RecG_wedge PF17191.4 gi|452209885|ref|YP_007489999.1| - 0.061 12.9 6.1 0.13 11.9 0.2 3.5 3 2 1 4 4 4 0 RecG wedge domain T2SS-T3SS_pil_N PF13629.6 gi|452209885|ref|YP_007489999.1| - 3.4 7.5 5.8 28 4.5 0.0 3.9 5 0 0 5 5 5 0 Pilus formation protein N terminal region CBS PF00571.28 gi|452209886|ref|YP_007490000.1| - 1.9e-21 76.3 6.7 9.4e-13 48.4 0.4 2.3 2 0 0 2 2 2 2 CBS domain CBS PF00571.28 gi|452209887|ref|YP_007490001.1| - 6.2e-44 148.3 11.0 4.2e-12 46.3 0.1 4.1 4 0 0 4 4 4 4 CBS domain IF3_N PF05198.16 gi|452209887|ref|YP_007490001.1| - 4.5 7.6 7.1 7.1 7.0 0.1 3.9 4 1 0 4 4 4 0 Translation initiation factor IF-3, N-terminal domain CBS PF00571.28 gi|452209888|ref|YP_007490002.1| - 1.1e-48 163.5 4.9 4.3e-13 49.5 0.2 4.2 4 0 0 4 4 4 4 CBS domain Tis11B_N PF04553.12 gi|452209888|ref|YP_007490002.1| - 0.019 15.5 0.1 0.049 14.2 0.0 1.7 2 0 0 2 2 2 0 Tis11B like protein, N terminus TMEM237 PF15383.6 gi|452209888|ref|YP_007490002.1| - 0.041 13.0 0.3 0.077 12.1 0.3 1.5 1 1 0 1 1 1 0 Transmembrane protein 237 CBS PF00571.28 gi|452209889|ref|YP_007490003.1| - 1.4e-48 163.1 18.5 1e-14 54.7 0.6 4.1 4 0 0 4 4 4 4 CBS domain CBS PF00571.28 gi|452209890|ref|YP_007490004.1| - 1.3e-42 144.0 10.1 3.9e-13 49.6 0.2 4.1 4 0 0 4 4 4 4 CBS domain Ribosomal_S7 PF00177.21 gi|452209890|ref|YP_007490004.1| - 0.18 11.5 0.5 1 9.0 0.1 2.3 2 1 0 2 2 2 0 Ribosomal protein S7p/S5e AIM24 PF01987.17 gi|452209891|ref|YP_007490005.1| - 3.6e-64 216.3 0.2 4.2e-64 216.1 0.2 1.0 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 Lig_C PF18330.1 gi|452209892|ref|YP_007490006.1| - 5.1e-48 162.2 0.3 1.3e-47 160.9 0.2 1.8 2 0 0 2 2 2 1 Ligase Pab1020 C-terminal region RNA_ligase PF09414.10 gi|452209892|ref|YP_007490006.1| - 3e-19 69.9 0.1 4.8e-19 69.2 0.1 1.3 1 0 0 1 1 1 1 RNA ligase DNA_ligase_A_M PF01068.21 gi|452209892|ref|YP_007490006.1| - 1.7e-08 34.3 0.1 3e-06 27.0 0.1 2.4 1 1 0 1 1 1 1 ATP dependent DNA ligase domain TusA PF01206.17 gi|452209892|ref|YP_007490006.1| - 0.0093 15.8 0.0 0.91 9.4 0.0 2.9 2 0 0 2 2 2 1 Sulfurtransferase TusA DDE_Tnp_1_6 PF13751.6 gi|452209893|ref|YP_007490007.1| - 1.3e-28 99.8 2.8 6.6e-28 97.4 2.2 2.3 2 0 0 2 2 2 1 Transposase DDE domain DDE_Tnp_1 PF01609.21 gi|452209893|ref|YP_007490007.1| - 2.1e-19 70.0 1.7 6.2e-19 68.5 1.7 1.9 1 1 0 1 1 1 1 Transposase DDE domain DUF772 PF05598.11 gi|452209893|ref|YP_007490007.1| - 4e-16 58.8 0.0 1.1e-15 57.3 0.0 1.8 1 0 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1_2 PF13586.6 gi|452209893|ref|YP_007490007.1| - 0.0077 16.6 0.0 0.92 9.9 0.0 2.9 2 0 0 2 2 2 1 Transposase DDE domain RE_XamI PF09572.10 gi|452209893|ref|YP_007490007.1| - 0.031 14.0 0.1 0.13 11.9 0.0 2.0 2 1 0 2 2 2 0 XamI restriction endonuclease DUF4286 PF14114.6 gi|452209893|ref|YP_007490007.1| - 0.11 13.0 0.1 3.9 8.0 0.0 3.1 2 1 1 3 3 3 0 Domain of unknown function (DUF4286) GTP_EFTU_D2 PF03144.25 gi|452209894|ref|YP_007490008.1| - 9.4e-05 22.7 0.6 0.0034 17.8 0.3 2.5 2 0 0 2 2 2 2 Elongation factor Tu domain 2 GGACT PF06094.12 gi|452209895|ref|YP_007490009.1| - 8.7e-14 52.2 0.2 1.2e-13 51.8 0.2 1.2 1 0 0 1 1 1 1 Gamma-glutamyl cyclotransferase, AIG2-like DUF1947 PF09183.10 gi|452209895|ref|YP_007490009.1| - 0.044 14.1 0.2 13 6.2 0.8 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF1947) AP_endonuc_2 PF01261.24 gi|452209896|ref|YP_007490010.1| - 1.4e-32 112.8 0.0 1.8e-32 112.5 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel RNA_binding PF01877.17 gi|452209897|ref|YP_007490011.1| - 1.1e-16 61.1 0.0 1.5e-16 60.7 0.0 1.1 1 0 0 1 1 1 1 RNA binding Aldo_ket_red PF00248.21 gi|452209897|ref|YP_007490011.1| - 0.21 10.7 0.0 0.27 10.4 0.0 1.1 1 0 0 1 1 1 0 Aldo/keto reductase family AAA_17 PF13207.6 gi|452209898|ref|YP_007490012.1| - 2.8e-16 60.2 0.2 4.2e-16 59.6 0.2 1.3 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|452209898|ref|YP_007490012.1| - 4.6e-12 46.6 0.0 6.7e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|452209898|ref|YP_007490012.1| - 2.1e-05 24.7 0.0 2.9e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 AAA domain ADK PF00406.22 gi|452209898|ref|YP_007490012.1| - 0.006 16.7 0.1 0.0079 16.3 0.1 1.3 1 1 0 1 1 1 1 Adenylate kinase Zeta_toxin PF06414.12 gi|452209898|ref|YP_007490012.1| - 0.091 12.0 0.0 0.15 11.3 0.0 1.2 1 1 0 1 1 1 0 Zeta toxin KTI12 PF08433.10 gi|452209898|ref|YP_007490012.1| - 0.1 12.0 0.0 0.27 10.7 0.0 1.9 1 1 0 1 1 1 0 Chromatin associated protein KTI12 PEP-utilizers PF00391.23 gi|452209898|ref|YP_007490012.1| - 0.17 11.6 1.2 0.43 10.3 1.2 1.7 1 1 0 1 1 1 0 PEP-utilising enzyme, mobile domain Cdc6_C PF09079.11 gi|452209899|ref|YP_007490013.1| - 1.8e-23 82.3 0.4 4.5e-23 81.0 0.4 1.7 1 0 0 1 1 1 1 CDC6, C terminal winged helix domain AAA_22 PF13401.6 gi|452209899|ref|YP_007490013.1| - 0.00018 21.8 0.3 0.00068 19.9 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA PF00004.29 gi|452209899|ref|YP_007490013.1| - 0.0036 17.7 0.1 0.0092 16.4 0.1 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DUF1202 PF06717.11 gi|452209899|ref|YP_007490013.1| - 0.074 12.5 0.0 0.49 9.8 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1202) DEAD PF00270.29 gi|452209899|ref|YP_007490013.1| - 0.11 12.3 0.3 1.4 8.7 0.0 2.2 2 0 0 2 2 2 0 DEAD/DEAH box helicase SSF PF00474.17 gi|452209900|ref|YP_007490014.1| - 9.3e-104 347.5 28.9 1.2e-103 347.1 28.9 1.2 1 0 0 1 1 1 1 Sodium:solute symporter family Pyridoxal_deC PF00282.19 gi|452209901|ref|YP_007490015.1| - 5.5e-32 110.9 0.0 8.2e-32 110.3 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Aminotran_5 PF00266.19 gi|452209901|ref|YP_007490015.1| - 2.6e-08 33.2 0.0 6.1e-08 32.0 0.0 1.5 2 0 0 2 2 2 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 gi|452209901|ref|YP_007490015.1| - 1.9e-07 30.6 0.0 1.8e-06 27.4 0.0 2.0 1 1 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|452209901|ref|YP_007490015.1| - 0.14 11.4 0.0 0.22 10.8 0.0 1.2 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family CBS PF00571.28 gi|452209902|ref|YP_007490016.1| - 2.1e-27 95.3 5.3 5.5e-13 49.1 0.1 2.3 2 0 0 2 2 2 2 CBS domain Peptidase_M50 PF02163.22 gi|452209902|ref|YP_007490016.1| - 1.1e-13 51.1 6.1 9.5e-08 31.6 0.2 3.3 1 1 2 3 3 3 2 Peptidase family M50 Peptidase_M50B PF13398.6 gi|452209902|ref|YP_007490016.1| - 0.00033 20.3 0.4 0.00033 20.3 0.4 2.1 1 1 0 2 2 2 1 Peptidase M50B-like TraB PF01963.17 gi|452209903|ref|YP_007490017.1| - 1.7e-32 113.4 0.0 2.6e-32 112.8 0.0 1.2 1 0 0 1 1 1 1 TraB family ABC2_membrane_3 PF12698.7 gi|452209903|ref|YP_007490017.1| - 0.19 10.8 8.6 0.37 9.8 8.6 1.4 1 0 0 1 1 1 0 ABC-2 family transporter protein FTR_C PF02741.15 gi|452209905|ref|YP_007490019.1| - 2.2e-67 225.7 3.0 3.4e-67 225.1 3.0 1.3 1 0 0 1 1 1 1 FTR, proximal lobe FTR PF01913.18 gi|452209905|ref|YP_007490019.1| - 9.8e-65 216.8 1.6 1.5e-64 216.2 0.1 2.0 2 1 0 2 2 2 1 Formylmethanofuran-tetrahydromethanopterin formyltransferase GPAT_N PF14829.6 gi|452209905|ref|YP_007490019.1| - 0.043 13.8 0.0 0.083 12.9 0.0 1.5 1 0 0 1 1 1 0 Glycerol-3-phosphate acyltransferase N-terminal PAS_4 PF08448.10 gi|452209905|ref|YP_007490019.1| - 0.064 13.5 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 PAS fold CheD PF03975.13 gi|452209906|ref|YP_007490020.1| - 1.8e-31 108.4 0.1 2.4e-31 108.0 0.1 1.2 1 0 0 1 1 1 1 CheD chemotactic sensory transduction CheC PF04509.12 gi|452209907|ref|YP_007490021.1| - 3.7e-09 36.3 0.4 0.001 18.9 0.2 2.7 2 0 0 2 2 2 2 CheC-like family CheX PF13690.6 gi|452209907|ref|YP_007490021.1| - 0.0012 19.0 0.2 0.022 14.9 0.0 2.2 2 0 0 2 2 2 1 Chemotaxis phosphatase CheX CheR PF01739.18 gi|452209908|ref|YP_007490022.1| - 4.3e-57 192.8 0.2 6.7e-57 192.1 0.2 1.3 1 0 0 1 1 1 1 CheR methyltransferase, SAM binding domain CheR_N PF03705.15 gi|452209908|ref|YP_007490022.1| - 3.4e-13 49.1 0.3 7.3e-13 48.0 0.3 1.6 1 0 0 1 1 1 1 CheR methyltransferase, all-alpha domain Methyltransf_31 PF13847.6 gi|452209908|ref|YP_007490022.1| - 4.6e-06 26.5 0.1 0.074 12.9 0.1 2.3 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_12 PF08242.12 gi|452209908|ref|YP_007490022.1| - 2.7e-05 24.8 0.1 9.2e-05 23.1 0.1 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|452209908|ref|YP_007490022.1| - 8.6e-05 23.2 0.1 0.11 13.2 0.1 3.3 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|452209908|ref|YP_007490022.1| - 0.0028 17.5 0.0 0.0042 16.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|452209908|ref|YP_007490022.1| - 0.022 15.4 0.1 0.64 10.7 0.1 2.6 1 1 0 1 1 1 0 Methyltransferase domain NodS PF05401.11 gi|452209908|ref|YP_007490022.1| - 0.13 11.9 0.0 0.29 10.7 0.0 1.5 1 0 0 1 1 1 0 Nodulation protein S (NodS) CheW PF01584.19 gi|452209909|ref|YP_007490023.1| - 3.6e-24 85.0 0.9 7.2e-24 84.0 0.6 1.7 2 0 0 2 2 2 1 CheW-like domain HATPase_c PF02518.26 gi|452209909|ref|YP_007490023.1| - 8.2e-20 71.4 0.2 1.8e-19 70.3 0.2 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Hpt PF01627.23 gi|452209909|ref|YP_007490023.1| - 1.3e-16 60.6 0.1 4.1e-16 59.0 0.1 2.0 1 0 0 1 1 1 1 Hpt domain H-kinase_dim PF02895.14 gi|452209909|ref|YP_007490023.1| - 3.9e-12 46.4 1.4 3.9e-12 46.4 1.4 2.6 2 0 0 2 2 2 1 Signal transducing histidine kinase, homodimeric domain HATPase_c_3 PF13589.6 gi|452209909|ref|YP_007490023.1| - 4.8e-05 23.2 0.0 0.00019 21.3 0.0 2.0 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF966 PF06136.13 gi|452209909|ref|YP_007490023.1| - 1.6 8.4 30.6 2.6 7.7 30.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF966) Borrelia_P83 PF05262.11 gi|452209909|ref|YP_007490023.1| - 4.7 5.6 30.6 6.6 5.1 30.6 1.2 1 0 0 1 1 1 0 Borrelia P83/100 protein CheB_methylest PF01339.17 gi|452209910|ref|YP_007490024.1| - 6.4e-62 208.3 0.0 1.5e-60 203.8 0.0 2.3 2 0 0 2 2 2 1 CheB methylesterase Response_reg PF00072.24 gi|452209910|ref|YP_007490024.1| - 2.2e-22 79.3 0.7 7.1e-22 77.7 0.4 2.0 2 0 0 2 2 2 1 Response regulator receiver domain Eno-Rase_NADH_b PF12242.8 gi|452209910|ref|YP_007490024.1| - 0.0088 15.8 0.1 0.019 14.7 0.1 1.6 1 0 0 1 1 1 1 NAD(P)H binding domain of trans-2-enoyl-CoA reductase Response_reg PF00072.24 gi|452209911|ref|YP_007490025.1| - 6.1e-28 97.2 2.0 6.8e-28 97.1 2.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain Peptidase_M29 PF02073.15 gi|452209911|ref|YP_007490025.1| - 0.047 12.5 0.1 6.3 5.5 0.0 2.0 1 1 1 2 2 2 0 Thermophilic metalloprotease (M29) Response_reg PF00072.24 gi|452209912|ref|YP_007490026.1| - 3.6e-23 81.9 0.0 4e-23 81.7 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain MCPsignal PF00015.21 gi|452209913|ref|YP_007490027.1| - 2.4e-48 164.2 19.6 2.4e-48 164.2 19.6 5.3 4 3 2 6 6 6 3 Methyl-accepting chemotaxis protein (MCP) signalling domain HAMP PF00672.25 gi|452209913|ref|YP_007490027.1| - 1.2e-10 41.6 2.1 1.3e-08 35.1 0.0 4.8 4 2 0 4 4 4 1 HAMP domain DUF948 PF06103.11 gi|452209913|ref|YP_007490027.1| - 0.003 17.8 27.8 0.6 10.4 1.6 6.1 3 2 2 5 5 5 3 Bacterial protein of unknown function (DUF948) cwf21 PF08312.12 gi|452209913|ref|YP_007490027.1| - 0.043 14.0 2.6 1.6 9.0 0.0 3.8 3 0 0 3 3 3 0 cwf21 domain DUF2675 PF11247.8 gi|452209913|ref|YP_007490027.1| - 0.05 13.8 0.1 1.6 8.9 0.1 2.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2675) Baculo_11_kDa PF06143.11 gi|452209913|ref|YP_007490027.1| - 0.12 12.0 1.6 0.31 10.6 0.1 2.5 2 0 0 2 2 2 0 Baculovirus 11 kDa family T7SS_ESX_EspC PF10824.8 gi|452209913|ref|YP_007490027.1| - 0.93 10.0 0.0 0.93 10.0 0.0 4.6 4 1 0 4 4 4 0 Excreted virulence factor EspC, type VII ESX diderm DUF1664 PF07889.12 gi|452209913|ref|YP_007490027.1| - 4.2 7.4 29.0 0.59 10.2 3.1 4.9 3 2 4 7 7 7 0 Protein of unknown function (DUF1664) DUF3450 PF11932.8 gi|452209913|ref|YP_007490027.1| - 4.4 6.5 19.6 0.42 9.9 6.0 3.7 1 1 3 4 4 4 0 Protein of unknown function (DUF3450) CheW PF01584.19 gi|452209914|ref|YP_007490028.1| - 3.2e-35 120.8 0.5 4e-35 120.5 0.5 1.1 1 0 0 1 1 1 1 CheW-like domain Herpes_pp85 PF04637.12 gi|452209914|ref|YP_007490028.1| - 0.16 10.3 6.1 0.2 10.0 6.1 1.2 1 0 0 1 1 1 0 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) GntP_permease PF02447.16 gi|452209915|ref|YP_007490029.1| - 6.4e-66 222.9 20.0 9e-66 222.4 20.0 1.1 1 0 0 1 1 1 1 GntP family permease Fe_dep_repress PF01325.19 gi|452209916|ref|YP_007490030.1| - 1.1e-13 51.1 0.0 1.7e-13 50.5 0.0 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain Fe_dep_repr_C PF02742.15 gi|452209916|ref|YP_007490030.1| - 1.7e-08 34.4 0.0 2.8e-08 33.7 0.0 1.3 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain MarR_2 PF12802.7 gi|452209916|ref|YP_007490030.1| - 2.1e-05 24.3 0.0 4.1e-05 23.4 0.0 1.4 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|452209916|ref|YP_007490030.1| - 0.00025 20.9 0.0 0.00061 19.7 0.0 1.7 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.6 gi|452209916|ref|YP_007490030.1| - 0.00058 20.3 0.0 0.00078 19.9 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 gi|452209916|ref|YP_007490030.1| - 0.0009 19.2 0.0 0.0015 18.5 0.0 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_DeoR PF08220.12 gi|452209916|ref|YP_007490030.1| - 0.0027 17.4 0.0 0.29 10.9 0.0 2.1 2 0 0 2 2 2 1 DeoR-like helix-turn-helix domain TrmB PF01978.19 gi|452209916|ref|YP_007490030.1| - 0.0029 17.4 0.0 0.0058 16.5 0.0 1.5 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Rrf2 PF02082.20 gi|452209916|ref|YP_007490030.1| - 0.0065 16.8 0.0 0.011 16.1 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator HTH_20 PF12840.7 gi|452209916|ref|YP_007490030.1| - 0.0071 16.4 0.0 0.061 13.4 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|452209916|ref|YP_007490030.1| - 0.035 14.0 0.0 0.15 12.0 0.0 1.9 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family HTH_IclR PF09339.10 gi|452209916|ref|YP_007490030.1| - 0.04 13.7 0.0 0.072 12.9 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_36 PF13730.6 gi|452209916|ref|YP_007490030.1| - 0.078 13.0 0.0 0.14 12.1 0.0 1.6 1 1 0 1 1 1 0 Helix-turn-helix domain Topoisom_bac PF01131.20 gi|452209916|ref|YP_007490030.1| - 0.087 11.8 0.0 0.11 11.5 0.0 1.1 1 0 0 1 1 1 0 DNA topoisomerase HTH_23 PF13384.6 gi|452209916|ref|YP_007490030.1| - 0.15 11.9 0.0 8.1 6.4 0.0 2.2 2 0 0 2 2 2 0 Homeodomain-like domain ZnuA PF01297.17 gi|452209917|ref|YP_007490031.1| - 4.4e-66 222.9 0.2 5.2e-66 222.7 0.2 1.0 1 0 0 1 1 1 1 Zinc-uptake complex component A periplasmic Aminotran_MocR PF12897.7 gi|452209917|ref|YP_007490031.1| - 0.022 13.5 0.0 0.035 12.9 0.0 1.3 1 0 0 1 1 1 0 Alanine-glyoxylate amino-transferase Glyco_tran_WecB PF03808.13 gi|452209917|ref|YP_007490031.1| - 0.052 13.5 0.0 0.12 12.4 0.0 1.6 2 0 0 2 2 2 0 Glycosyl transferase WecB/TagA/CpsF family FtsH_ext PF06480.15 gi|452209917|ref|YP_007490031.1| - 0.086 13.2 0.2 0.51 10.7 0.1 2.2 2 1 0 2 2 2 0 FtsH Extracellular ABC_tran PF00005.27 gi|452209918|ref|YP_007490032.1| - 3.1e-29 102.2 0.0 4.5e-29 101.7 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|452209918|ref|YP_007490032.1| - 9.5e-17 61.7 1.4 1.3e-09 38.4 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|452209918|ref|YP_007490032.1| - 8.5e-08 31.9 0.0 2e-07 30.7 0.0 1.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|452209918|ref|YP_007490032.1| - 2.5e-06 27.5 0.1 0.012 15.3 0.0 2.2 1 1 1 2 2 2 2 AAA ATPase domain AAA_23 PF13476.6 gi|452209918|ref|YP_007490032.1| - 0.0015 19.0 1.8 0.0025 18.3 1.8 1.6 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|452209918|ref|YP_007490032.1| - 0.0029 17.9 0.1 0.0084 16.4 0.1 1.7 1 1 0 1 1 1 1 AAA domain SbcCD_C PF13558.6 gi|452209918|ref|YP_007490032.1| - 0.004 17.4 0.0 0.16 12.2 0.0 2.4 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA PF00004.29 gi|452209918|ref|YP_007490032.1| - 0.0045 17.4 1.2 0.052 14.0 1.2 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 gi|452209918|ref|YP_007490032.1| - 0.015 15.2 0.0 0.036 14.0 0.0 1.6 1 1 1 2 2 2 0 Rad17 P-loop domain AAA_29 PF13555.6 gi|452209918|ref|YP_007490032.1| - 0.024 14.4 0.1 0.048 13.4 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_30 PF13604.6 gi|452209918|ref|YP_007490032.1| - 0.032 13.9 0.0 0.082 12.6 0.0 1.8 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|452209918|ref|YP_007490032.1| - 0.063 13.7 0.0 0.13 12.7 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain T2SSE PF00437.20 gi|452209918|ref|YP_007490032.1| - 0.087 11.9 0.0 0.16 11.0 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein ABC_ATPase PF09818.9 gi|452209918|ref|YP_007490032.1| - 0.12 11.1 0.8 10 4.8 1.0 2.1 2 0 0 2 2 2 0 Predicted ATPase of the ABC class AAA_19 PF13245.6 gi|452209918|ref|YP_007490032.1| - 0.12 12.7 0.3 1.2 9.5 0.1 2.1 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.14 gi|452209918|ref|YP_007490032.1| - 0.15 12.1 0.4 4 7.4 0.2 2.4 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) MobB PF03205.14 gi|452209918|ref|YP_007490032.1| - 0.19 11.6 0.2 0.39 10.6 0.2 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B ABC-3 PF00950.17 gi|452209919|ref|YP_007490033.1| - 2.6e-82 276.2 28.1 3.1e-82 275.9 28.1 1.0 1 0 0 1 1 1 1 ABC 3 transport family FecCD PF01032.18 gi|452209919|ref|YP_007490033.1| - 7.5e-09 35.0 17.5 7.5e-09 35.0 17.5 1.9 1 1 1 2 2 2 1 FecCD transport family Consortin_C PF15281.6 gi|452209919|ref|YP_007490033.1| - 0.19 11.8 0.7 0.38 10.8 0.7 1.5 1 0 0 1 1 1 0 Consortin C-terminus DUF3302 PF11742.8 gi|452209919|ref|YP_007490033.1| - 5.3 7.2 14.1 0.087 13.0 3.1 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF3302) MAT1 PF06391.13 gi|452209920|ref|YP_007490034.1| - 0.45 10.3 1.9 9 6.1 0.6 2.1 2 0 0 2 2 2 0 CDK-activating kinase assembly factor MAT1 DUF11 PF01345.18 gi|452209921|ref|YP_007490035.1| - 2.6e-40 136.6 62.8 2.8e-05 24.3 3.6 9.4 9 0 0 9 9 9 8 Domain of unknown function DUF11 ATP-synt_ab_Xtn PF16886.5 gi|452209921|ref|YP_007490035.1| - 0.0036 17.1 9.2 0.91 9.4 0.1 5.7 5 0 0 5 5 5 1 ATPsynthase alpha/beta subunit N-term extension AbrB-like PF14250.6 gi|452209921|ref|YP_007490035.1| - 0.016 15.3 4.7 9.4 6.4 0.1 5.1 5 0 0 5 5 5 0 AbrB-like transcriptional regulator Integrase_DNA PF02920.15 gi|452209921|ref|YP_007490035.1| - 0.085 12.6 0.0 71 3.2 0.0 4.2 6 0 0 6 6 6 0 DNA binding domain of tn916 integrase TPP_enzyme_C PF02775.21 gi|452209922|ref|YP_007490036.1| - 8.7e-28 97.0 0.0 1.5e-27 96.3 0.0 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.19 gi|452209923|ref|YP_007490037.1| - 5.3e-67 225.9 0.1 7.3e-67 225.5 0.1 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PFOR_II PF17147.4 gi|452209923|ref|YP_007490037.1| - 8.9e-34 115.9 0.2 1.9e-33 114.8 0.2 1.6 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Transketolase_C PF02780.20 gi|452209923|ref|YP_007490037.1| - 1.9e-07 31.0 0.1 4e-07 29.9 0.1 1.6 1 0 0 1 1 1 1 Transketolase, C-terminal domain Fer4 PF00037.27 gi|452209924|ref|YP_007490038.1| - 5.3e-13 48.2 22.8 6.5e-08 32.1 4.6 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|452209924|ref|YP_007490038.1| - 1.1e-09 37.9 19.6 1.4e-05 25.0 3.2 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|452209924|ref|YP_007490038.1| - 2.1e-09 36.9 15.9 0.00011 22.1 2.5 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|452209924|ref|YP_007490038.1| - 1.6e-07 31.3 10.9 1.6e-07 31.3 10.9 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|452209924|ref|YP_007490038.1| - 1.8e-07 31.1 10.3 1.8e-07 31.1 10.3 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|452209924|ref|YP_007490038.1| - 4e-07 30.5 17.9 8.2e-07 29.5 13.7 2.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|452209924|ref|YP_007490038.1| - 1.5e-06 28.2 15.6 0.00035 20.6 0.5 2.9 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452209924|ref|YP_007490038.1| - 4.2e-06 27.6 17.6 0.0019 19.1 2.0 3.0 2 1 2 4 4 4 3 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|452209924|ref|YP_007490038.1| - 3.6e-05 23.9 19.7 0.0067 16.9 2.4 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|452209924|ref|YP_007490038.1| - 0.00037 21.0 9.5 0.051 14.1 0.8 3.1 3 0 0 3 3 3 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_17 PF13534.6 gi|452209924|ref|YP_007490038.1| - 0.0032 18.0 19.5 0.49 11.0 3.2 3.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|452209924|ref|YP_007490038.1| - 0.0052 17.2 19.0 0.11 13.0 3.0 2.9 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|452209924|ref|YP_007490038.1| - 0.021 15.5 11.2 0.17 12.6 3.4 2.8 2 1 0 2 2 2 0 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|452209924|ref|YP_007490038.1| - 0.12 13.3 15.5 0.31 11.9 1.7 2.6 2 1 1 3 3 3 0 4Fe-4S dicluster domain POR PF01558.18 gi|452209925|ref|YP_007490039.1| - 5e-41 140.7 1.2 5.8e-41 140.5 1.2 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase Peptidase_S24 PF00717.23 gi|452209926|ref|YP_007490040.1| - 3.5e-05 23.7 0.2 6.1e-05 22.9 0.2 1.4 1 0 0 1 1 1 1 Peptidase S24-like DNA_pol_E_B PF04042.16 gi|452209927|ref|YP_007490041.1| - 1.2e-15 57.5 0.0 1.9e-15 56.8 0.0 1.3 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B Metallophos PF00149.28 gi|452209927|ref|YP_007490041.1| - 3.9e-13 50.4 0.2 8.3e-13 49.3 0.1 1.6 2 0 0 2 2 2 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|452209927|ref|YP_007490041.1| - 2.7e-09 37.4 0.3 7e-09 36.1 0.3 1.7 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain tRNA_anti-codon PF01336.25 gi|452209927|ref|YP_007490041.1| - 0.0001 22.2 0.0 0.00024 21.0 0.0 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain Wyosine_form PF08608.12 gi|452209928|ref|YP_007490042.1| - 3.9e-23 81.6 0.0 6.6e-23 80.8 0.0 1.4 1 0 0 1 1 1 1 Wyosine base formation Radical_SAM PF04055.21 gi|452209928|ref|YP_007490042.1| - 4.3e-21 76.0 0.1 2.8e-19 70.1 0.1 2.7 2 1 0 2 2 2 1 Radical SAM superfamily Nif11 PF07862.11 gi|452209928|ref|YP_007490042.1| - 0.17 12.2 0.0 2.9 8.3 0.0 2.3 2 0 0 2 2 2 0 Nif11 domain eRF1_2 PF03464.15 gi|452209929|ref|YP_007490043.1| - 1e-41 142.3 0.0 1.7e-41 141.6 0.0 1.4 1 0 0 1 1 1 1 eRF1 domain 2 eRF1_3 PF03465.15 gi|452209929|ref|YP_007490043.1| - 8.6e-31 106.7 0.0 4.3e-30 104.5 0.0 2.0 2 0 0 2 2 2 1 eRF1 domain 3 eRF1_1 PF03463.15 gi|452209929|ref|YP_007490043.1| - 5.8e-14 52.2 0.0 1.2e-13 51.2 0.0 1.5 1 0 0 1 1 1 1 eRF1 domain 1 acVLRF1 PF18859.1 gi|452209929|ref|YP_007490043.1| - 2.5e-10 40.7 0.0 4.4e-10 39.9 0.0 1.4 1 0 0 1 1 1 1 Actinobacteria/chloroflexi VLRF1 release factor baeRF_family10 PF18854.1 gi|452209929|ref|YP_007490043.1| - 1e-09 38.8 0.0 2e-09 37.8 0.0 1.5 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 10 HypA PF01155.19 gi|452209929|ref|YP_007490043.1| - 0.011 15.7 0.0 0.022 14.8 0.0 1.5 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA RNA_POL_M_15KD PF02150.16 gi|452209929|ref|YP_007490043.1| - 0.069 13.0 1.5 12 5.9 0.1 2.8 3 0 0 3 3 3 0 RNA polymerases M/15 Kd subunit zf-TFIIB PF13453.6 gi|452209929|ref|YP_007490043.1| - 0.12 11.7 0.1 0.31 10.4 0.1 1.7 1 0 0 1 1 1 0 Transcription factor zinc-finger Zn-ribbon_8 PF09723.10 gi|452209929|ref|YP_007490043.1| - 0.12 12.5 2.8 0.65 10.2 0.6 2.6 2 0 0 2 2 2 0 Zinc ribbon domain RE_LlaMI PF09562.10 gi|452209929|ref|YP_007490043.1| - 0.14 11.7 0.0 0.23 11.0 0.0 1.2 1 0 0 1 1 1 0 LlaMI restriction endonuclease zf-ribbon_3 PF13248.6 gi|452209929|ref|YP_007490043.1| - 0.22 11.0 3.0 0.93 9.0 0.2 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|452209929|ref|YP_007490043.1| - 0.27 11.0 3.9 5.2 6.9 0.1 2.5 2 0 0 2 2 2 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|452209929|ref|YP_007490043.1| - 0.35 10.9 3.0 0.37 10.8 0.3 2.2 1 1 1 2 2 2 0 Transposase zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|452209929|ref|YP_007490043.1| - 0.72 9.8 2.4 0.71 9.8 0.8 1.8 2 0 0 2 2 2 0 Putative transposase DNA-binding domain tRNA-synt_1d PF00750.19 gi|452209930|ref|YP_007490044.1| - 6.7e-40 137.1 0.1 1.2e-39 136.3 0.1 1.4 2 0 0 2 2 2 1 tRNA synthetases class I (R) DALR_1 PF05746.15 gi|452209930|ref|YP_007490044.1| - 5.4e-33 113.7 0.1 1.3e-32 112.5 0.1 1.7 1 0 0 1 1 1 1 DALR anticodon binding domain Arg_tRNA_synt_N PF03485.16 gi|452209930|ref|YP_007490044.1| - 5e-14 52.7 0.1 1.4e-13 51.2 0.1 1.8 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1g PF09334.11 gi|452209930|ref|YP_007490044.1| - 1.2e-06 27.6 0.0 0.0011 17.8 0.0 3.2 2 1 0 3 3 3 2 tRNA synthetases class I (M) tRNA-synt_1f PF01921.18 gi|452209930|ref|YP_007490044.1| - 2.4e-06 26.7 0.0 0.029 13.3 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (K) tRNA-synt_1e PF01406.19 gi|452209930|ref|YP_007490044.1| - 4.4e-05 23.0 0.1 7.7e-05 22.2 0.1 1.4 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1 PF00133.22 gi|452209930|ref|YP_007490044.1| - 0.0064 14.8 0.0 0.0096 14.2 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Phage_int_SAM_4 PF13495.6 gi|452209931|ref|YP_007490045.1| - 0.00093 19.6 0.0 0.0018 18.7 0.0 1.5 1 0 0 1 1 1 1 Phage integrase, N-terminal SAM-like domain Asn_synthase PF00733.21 gi|452209934|ref|YP_007490048.1| - 3.1e-15 56.7 0.0 1.7e-06 28.0 0.0 2.2 2 0 0 2 2 2 2 Asparagine synthase GATase_7 PF13537.6 gi|452209934|ref|YP_007490048.1| - 0.0001 22.2 0.0 0.00029 20.7 0.0 1.7 2 0 0 2 2 2 1 Glutamine amidotransferase domain QueC PF06508.13 gi|452209934|ref|YP_007490048.1| - 0.00018 21.0 0.0 0.00066 19.2 0.0 1.9 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC NAD_synthase PF02540.17 gi|452209934|ref|YP_007490048.1| - 0.0099 15.0 0.0 0.034 13.3 0.0 1.9 2 0 0 2 2 2 1 NAD synthase AARP2CN PF08142.12 gi|452209934|ref|YP_007490048.1| - 0.16 12.1 0.0 0.35 11.0 0.0 1.5 1 0 0 1 1 1 0 AARP2CN (NUC121) domain RHH_1 PF01402.21 gi|452209937|ref|YP_007490051.1| - 0.0012 18.6 0.1 0.0057 16.5 0.0 1.9 1 1 1 2 2 2 1 Ribbon-helix-helix protein, copG family Latarcin PF10279.9 gi|452209937|ref|YP_007490051.1| - 0.0088 16.4 0.2 0.01 16.2 0.2 1.1 1 0 0 1 1 1 1 Latarcin precursor Tho1_MOS11_C PF18592.1 gi|452209937|ref|YP_007490051.1| - 0.017 14.9 0.0 0.022 14.5 0.0 1.2 1 0 0 1 1 1 0 Tho1/MOS11 C-terminal domain BLOC1_2 PF10046.9 gi|452209937|ref|YP_007490051.1| - 0.041 14.2 0.1 0.042 14.1 0.1 1.1 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF4113 PF13438.6 gi|452209937|ref|YP_007490051.1| - 0.31 11.2 1.5 8.3 6.6 0.3 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4113) TRAM PF01938.20 gi|452209938|ref|YP_007490052.1| - 2.2e-17 62.8 0.9 2.5e-17 62.6 0.9 1.0 1 0 0 1 1 1 1 TRAM domain Hexapep PF00132.24 gi|452209938|ref|YP_007490052.1| - 0.11 12.3 0.1 0.2 11.5 0.1 1.4 1 0 0 1 1 1 0 Bacterial transferase hexapeptide (six repeats) TRAM PF01938.20 gi|452209939|ref|YP_007490053.1| - 5.5e-17 61.5 1.2 6.1e-17 61.4 1.2 1.0 1 0 0 1 1 1 1 TRAM domain Hexapep PF00132.24 gi|452209939|ref|YP_007490053.1| - 0.11 12.3 0.1 0.2 11.5 0.1 1.4 1 0 0 1 1 1 0 Bacterial transferase hexapeptide (six repeats) TRAM PF01938.20 gi|452209940|ref|YP_007490054.1| - 2.8e-14 52.8 0.4 3.5e-14 52.5 0.4 1.1 1 0 0 1 1 1 1 TRAM domain Hexapep PF00132.24 gi|452209940|ref|YP_007490054.1| - 0.11 12.3 0.1 0.19 11.5 0.1 1.4 1 0 0 1 1 1 0 Bacterial transferase hexapeptide (six repeats) Bactofilin PF04519.13 gi|452209941|ref|YP_007490055.1| - 9.7e-06 25.8 1.8 0.0027 18.0 2.1 2.0 1 1 0 1 1 1 1 Polymer-forming cytoskeletal Phage_spike PF18715.1 gi|452209941|ref|YP_007490055.1| - 0.0049 16.9 0.1 0.038 14.1 0.0 2.2 2 0 0 2 2 2 1 Phage spike trimer ABC_tran PF00005.27 gi|452209942|ref|YP_007490056.1| - 1.2e-32 113.3 0.0 1.7e-32 112.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|452209942|ref|YP_007490056.1| - 2.6e-05 24.2 0.3 0.15 11.9 0.1 2.3 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA PF00004.29 gi|452209942|ref|YP_007490056.1| - 0.00015 22.2 0.6 0.0018 18.7 0.6 2.5 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 gi|452209942|ref|YP_007490056.1| - 0.00067 19.6 0.0 0.0012 18.8 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 gi|452209942|ref|YP_007490056.1| - 0.0032 17.8 0.4 0.015 15.5 0.4 2.2 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|452209942|ref|YP_007490056.1| - 0.0038 17.6 0.1 0.013 15.9 0.0 1.8 2 1 0 2 2 2 1 AAA ATPase domain AAA_33 PF13671.6 gi|452209942|ref|YP_007490056.1| - 0.0043 17.2 0.0 0.013 15.6 0.0 1.7 1 1 0 1 1 1 1 AAA domain Rad17 PF03215.15 gi|452209942|ref|YP_007490056.1| - 0.0047 16.9 0.0 0.0085 16.0 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain IstB_IS21 PF01695.17 gi|452209942|ref|YP_007490056.1| - 0.0078 16.0 0.0 0.013 15.2 0.0 1.3 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_28 PF13521.6 gi|452209942|ref|YP_007490056.1| - 0.015 15.6 0.0 0.037 14.3 0.0 1.8 2 0 0 2 2 1 0 AAA domain AAA_29 PF13555.6 gi|452209942|ref|YP_007490056.1| - 0.015 15.0 0.1 0.031 14.0 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|452209942|ref|YP_007490056.1| - 0.019 15.4 0.2 0.043 14.3 0.1 1.4 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|452209942|ref|YP_007490056.1| - 0.037 13.9 0.2 0.11 12.4 0.1 1.8 2 0 0 2 2 2 0 NACHT domain AAA_5 PF07728.14 gi|452209942|ref|YP_007490056.1| - 0.041 13.9 0.3 0.11 12.5 0.1 1.8 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) SCAN PF02023.17 gi|452209942|ref|YP_007490056.1| - 0.095 12.5 0.0 0.27 11.1 0.0 1.8 1 0 0 1 1 1 0 SCAN domain AAA_18 PF13238.6 gi|452209942|ref|YP_007490056.1| - 0.1 13.1 0.2 0.21 12.2 0.2 1.5 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 gi|452209942|ref|YP_007490056.1| - 0.12 11.9 0.0 0.25 10.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 gi|452209942|ref|YP_007490056.1| - 0.13 12.1 0.0 0.32 10.9 0.0 1.6 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea TsaE PF02367.17 gi|452209942|ref|YP_007490056.1| - 0.15 12.1 0.1 0.26 11.3 0.1 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE SMC_N PF02463.19 gi|452209942|ref|YP_007490056.1| - 0.17 11.3 0.0 14 5.0 0.0 2.2 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain BPD_transp_1 PF00528.22 gi|452209943|ref|YP_007490057.1| - 6.7e-23 81.4 11.3 6.7e-23 81.4 11.3 1.4 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component NMT1_2 PF13379.6 gi|452209944|ref|YP_007490058.1| - 9.6e-36 123.8 0.0 1.5e-35 123.1 0.0 1.2 1 0 0 1 1 1 1 NMT1-like family NMT1 PF09084.11 gi|452209944|ref|YP_007490058.1| - 1.8e-17 64.0 0.0 2.3e-17 63.6 0.0 1.1 1 0 0 1 1 1 1 NMT1/THI5 like Phosphonate-bd PF12974.7 gi|452209944|ref|YP_007490058.1| - 3.3e-06 26.9 0.0 4.6e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein SBP_bac_3 PF00497.20 gi|452209944|ref|YP_007490058.1| - 0.00029 20.4 0.0 0.00061 19.3 0.0 1.5 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 NMT1_3 PF16868.5 gi|452209944|ref|YP_007490058.1| - 0.00034 20.1 0.0 0.0011 18.5 0.0 1.7 1 1 0 1 1 1 1 NMT1-like family DctP PF03480.13 gi|452209944|ref|YP_007490058.1| - 0.0041 16.5 0.0 0.0087 15.4 0.0 1.5 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein, family 7 LysR_substrate PF03466.20 gi|452209944|ref|YP_007490058.1| - 0.19 11.1 0.0 0.31 10.4 0.0 1.3 1 0 0 1 1 1 0 LysR substrate binding domain HTH_3 PF01381.22 gi|452209945|ref|YP_007490059.1| - 3.4e-08 33.4 0.1 8.8e-08 32.1 0.0 1.7 2 0 0 2 2 2 1 Helix-turn-helix HTH_19 PF12844.7 gi|452209945|ref|YP_007490059.1| - 0.0088 16.1 0.0 0.019 15.0 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain CENP-B_N PF04218.13 gi|452209945|ref|YP_007490059.1| - 0.018 14.7 1.5 0.62 9.7 0.0 3.2 4 0 0 4 4 4 0 CENP-B N-terminal DNA-binding domain PrpR_N PF06506.11 gi|452209945|ref|YP_007490059.1| - 0.041 13.5 0.4 0.12 12.0 0.5 1.8 1 1 0 1 1 1 0 Propionate catabolism activator HTH_26 PF13443.6 gi|452209945|ref|YP_007490059.1| - 0.13 12.7 0.0 0.25 11.8 0.0 1.5 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain HTH_31 PF13560.6 gi|452209945|ref|YP_007490059.1| - 0.13 12.6 0.0 0.24 11.8 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain S-layer PF07752.11 gi|452209946|ref|YP_007490060.1| - 9e-192 634.5 29.3 5.6e-96 320.5 13.3 3.1 3 0 0 3 3 3 2 S-layer protein CarboxypepD_reg PF13620.6 gi|452209946|ref|YP_007490060.1| - 6.4e-10 39.2 25.5 0.00018 21.7 0.2 6.5 5 1 1 6 6 6 2 Carboxypeptidase regulatory-like domain Ig_3 PF13927.6 gi|452209946|ref|YP_007490060.1| - 1.4e-06 28.8 18.2 0.03 14.9 1.1 6.7 5 1 2 7 7 7 2 Immunoglobulin domain CarbopepD_reg_2 PF13715.6 gi|452209946|ref|YP_007490060.1| - 1.7e-05 24.8 17.2 0.0025 17.8 0.2 5.0 5 0 0 5 5 4 2 CarboxypepD_reg-like domain I-set PF07679.16 gi|452209946|ref|YP_007490060.1| - 6.9e-05 22.8 12.5 0.0046 17.0 1.1 5.6 6 1 0 6 6 5 1 Immunoglobulin I-set domain SH3_16 PF18348.1 gi|452209946|ref|YP_007490060.1| - 0.00012 21.8 1.1 0.3 10.9 0.0 2.9 3 0 0 3 3 3 2 Bacterial dipeptidyl-peptidase Sh3 domain PEGA PF08308.11 gi|452209946|ref|YP_007490060.1| - 0.00025 20.9 5.1 0.0017 18.2 0.8 4.1 3 0 0 3 3 2 1 PEGA domain Y_Y_Y PF07495.13 gi|452209946|ref|YP_007490060.1| - 0.00039 20.3 10.9 0.037 14.0 1.4 4.4 4 1 0 4 4 4 2 Y_Y_Y domain DUF4198 PF10670.9 gi|452209946|ref|YP_007490060.1| - 0.00069 20.1 9.3 0.09 13.1 0.2 4.0 4 0 0 4 4 3 1 Domain of unknown function (DUF4198) Transthyretin PF00576.21 gi|452209946|ref|YP_007490060.1| - 0.0062 17.2 2.5 21 5.8 0.0 5.1 4 1 1 5 5 5 0 HIUase/Transthyretin family PA-IIL PF07472.11 gi|452209946|ref|YP_007490060.1| - 0.024 14.9 1.6 0.67 10.3 0.3 3.4 2 0 0 2 2 2 0 Fucose-binding lectin II (PA-IIL) PapC_N PF13954.6 gi|452209946|ref|YP_007490060.1| - 0.025 14.6 0.4 0.16 12.0 0.0 2.5 2 0 0 2 2 2 0 PapC N-terminal domain DUF4982 PF16355.5 gi|452209946|ref|YP_007490060.1| - 0.026 14.5 0.4 2 8.4 0.0 3.6 3 0 0 3 3 3 0 Domain of unknown function (DUF4982) PKD_3 PF16820.5 gi|452209946|ref|YP_007490060.1| - 0.045 13.5 12.7 0.051 13.3 0.1 5.8 5 1 0 5 5 5 0 PKD-like domain SRTM1 PF15872.5 gi|452209946|ref|YP_007490060.1| - 0.056 13.6 0.6 13 5.9 0.0 3.0 2 0 0 2 2 2 0 Serine-rich and transmembrane domain-containing protein 1 Fn3-like PF14310.6 gi|452209946|ref|YP_007490060.1| - 0.058 13.5 2.4 7.3 6.8 0.0 4.3 4 1 0 4 4 3 0 Fibronectin type III-like domain Ig_2 PF13895.6 gi|452209946|ref|YP_007490060.1| - 0.06 13.7 11.3 1.4 9.3 1.0 4.1 4 0 0 4 4 3 0 Immunoglobulin domain Cupredoxin_1 PF13473.6 gi|452209946|ref|YP_007490060.1| - 0.068 13.3 5.3 0.28 11.3 0.2 4.2 3 1 1 4 4 4 0 Cupredoxin-like domain ig PF00047.25 gi|452209946|ref|YP_007490060.1| - 0.07 13.3 3.3 11 6.3 0.0 3.4 3 0 0 3 3 3 0 Immunoglobulin domain DUF3324 PF11797.8 gi|452209946|ref|YP_007490060.1| - 0.092 12.7 0.9 5.5 7.0 0.0 4.0 5 0 0 5 5 4 0 Protein of unknown function C-terminal (DUF3324) GBS_Bsp-like PF08481.10 gi|452209946|ref|YP_007490060.1| - 0.32 11.2 0.0 0.32 11.2 0.0 5.1 6 0 0 6 6 5 0 GBS Bsp-like repeat YtkA PF13115.6 gi|452209946|ref|YP_007490060.1| - 0.37 11.4 7.0 15 6.2 0.1 4.3 4 1 0 4 4 3 0 YtkA-like DUF1616 PF07760.11 gi|452209946|ref|YP_007490060.1| - 0.49 9.7 4.0 0.5 9.7 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1616) TTR-52 PF01060.23 gi|452209946|ref|YP_007490060.1| - 0.89 10.3 4.2 9.5 7.0 0.1 4.4 4 0 0 4 4 4 0 Transthyretin-like family tRNA-synt_1c_C PF03950.18 gi|452209946|ref|YP_007490060.1| - 1.1 9.2 7.0 6.8 6.5 0.1 4.2 4 1 1 5 5 5 0 tRNA synthetases class I (E and Q), anti-codon binding domain PKD PF00801.20 gi|452209946|ref|YP_007490060.1| - 1.1 9.1 31.6 0.016 15.0 3.8 6.0 5 1 1 6 6 6 0 PKD domain EMP24_GP25L PF01105.24 gi|452209946|ref|YP_007490060.1| - 1.8 8.5 10.4 3.6 7.5 0.1 4.5 3 1 0 4 4 4 0 emp24/gp25L/p24 family/GOLD MetallophosN PF16371.5 gi|452209946|ref|YP_007490060.1| - 6.1 7.2 9.4 8 6.8 0.2 4.7 5 0 0 5 5 3 0 N terminal of Calcineurin-like phosphoesterase DUF1641 PF07849.11 gi|452209947|ref|YP_007490061.1| - 0.087 12.7 0.0 0.14 12.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1641) Radical_SAM PF04055.21 gi|452209948|ref|YP_007490062.1| - 1.9e-14 54.4 0.0 3.2e-14 53.6 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|452209948|ref|YP_007490062.1| - 3.4e-09 37.1 0.0 6.8e-09 36.1 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|452209948|ref|YP_007490062.1| - 1.4e-06 28.4 0.0 2.7e-06 27.5 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain DUF3381 PF11861.8 gi|452209948|ref|YP_007490062.1| - 0.011 15.6 0.2 0.017 15.0 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3381) CinA_KH PF18146.1 gi|452209948|ref|YP_007490062.1| - 0.032 14.4 0.0 2.2 8.5 0.1 2.4 2 0 0 2 2 2 0 Damage-inducible protein CinA KH domain NRDD PF13597.6 gi|452209949|ref|YP_007490063.1| - 6.6e-156 520.4 0.0 8.1e-156 520.1 0.0 1.0 1 0 0 1 1 1 1 Anaerobic ribonucleoside-triphosphate reductase Glutaredoxin PF00462.24 gi|452209950|ref|YP_007490064.1| - 2.6e-08 34.0 0.1 3.5e-08 33.6 0.1 1.2 1 0 0 1 1 1 1 Glutaredoxin DUF836 PF05768.14 gi|452209950|ref|YP_007490064.1| - 0.00061 20.2 0.0 0.00074 19.9 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) GST_N_3 PF13417.6 gi|452209950|ref|YP_007490064.1| - 0.0077 16.6 0.0 0.01 16.3 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Thioredoxin_2 PF13098.6 gi|452209950|ref|YP_007490064.1| - 0.11 12.9 0.2 0.12 12.9 0.2 1.2 1 1 0 1 1 1 0 Thioredoxin-like domain Rad51 PF08423.11 gi|452209951|ref|YP_007490065.1| - 2.2e-32 112.3 0.1 2.6e-32 112.1 0.1 1.1 1 0 0 1 1 1 1 Rad51 ATPase PF06745.13 gi|452209951|ref|YP_007490065.1| - 5.4e-15 55.4 0.5 9.5e-14 51.3 0.5 2.1 1 1 0 1 1 1 1 KaiC RecA PF00154.21 gi|452209951|ref|YP_007490065.1| - 1.1e-10 41.5 0.1 1.3e-10 41.2 0.1 1.1 1 0 0 1 1 1 1 recA bacterial DNA recombination protein AAA_25 PF13481.6 gi|452209951|ref|YP_007490065.1| - 2.2e-08 33.9 0.0 4.4e-08 32.9 0.0 1.5 1 1 0 1 1 1 1 AAA domain Zot PF05707.12 gi|452209951|ref|YP_007490065.1| - 1.3e-06 28.2 0.0 1.6e-06 27.9 0.0 1.1 1 0 0 1 1 1 1 Zonular occludens toxin (Zot) AAA_24 PF13479.6 gi|452209951|ref|YP_007490065.1| - 3e-05 23.8 0.0 4.1e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 gi|452209951|ref|YP_007490065.1| - 0.00017 21.3 0.0 0.00027 20.7 0.0 1.3 1 0 0 1 1 1 1 IstB-like ATP binding protein TrwB_AAD_bind PF10412.9 gi|452209951|ref|YP_007490065.1| - 0.00041 19.4 0.1 0.001 18.0 0.0 1.6 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain DUF815 PF05673.13 gi|452209951|ref|YP_007490065.1| - 0.00089 18.5 0.0 0.0013 17.9 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF815) PhoH PF02562.16 gi|452209951|ref|YP_007490065.1| - 0.00092 18.7 0.2 0.0017 17.8 0.2 1.3 1 0 0 1 1 1 1 PhoH-like protein CbiA PF01656.23 gi|452209951|ref|YP_007490065.1| - 0.002 18.2 0.0 0.0026 17.8 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain SRP54 PF00448.22 gi|452209951|ref|YP_007490065.1| - 0.0024 17.5 0.0 0.0032 17.1 0.0 1.2 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain DUF2075 PF09848.9 gi|452209951|ref|YP_007490065.1| - 0.0037 16.6 0.0 0.0045 16.3 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_31 PF13614.6 gi|452209951|ref|YP_007490065.1| - 0.0077 16.2 0.0 0.0093 15.9 0.0 1.2 1 0 0 1 1 1 1 AAA domain DnaB_C PF03796.15 gi|452209951|ref|YP_007490065.1| - 0.0087 15.4 0.0 0.03 13.7 0.0 1.5 1 1 0 1 1 1 1 DnaB-like helicase C terminal domain UvrD-helicase PF00580.21 gi|452209951|ref|YP_007490065.1| - 0.018 14.5 0.0 0.02 14.4 0.0 1.2 1 0 0 1 1 1 0 UvrD/REP helicase N-terminal domain AAA_18 PF13238.6 gi|452209951|ref|YP_007490065.1| - 0.054 14.0 0.0 0.09 13.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain CLP1_P PF16575.5 gi|452209951|ref|YP_007490065.1| - 0.061 13.1 0.0 0.097 12.5 0.0 1.3 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop DUF87 PF01935.17 gi|452209951|ref|YP_007490065.1| - 0.074 13.1 0.1 0.13 12.4 0.1 1.5 1 1 0 1 1 1 0 Helicase HerA, central domain AAA PF00004.29 gi|452209951|ref|YP_007490065.1| - 0.087 13.3 0.0 0.12 12.8 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 gi|452209951|ref|YP_007490065.1| - 0.097 12.4 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain MipZ PF09140.11 gi|452209951|ref|YP_007490065.1| - 0.14 11.4 0.0 0.2 10.9 0.0 1.3 1 0 0 1 1 1 0 ATPase MipZ IPT PF01745.16 gi|452209951|ref|YP_007490065.1| - 0.15 11.5 0.1 0.41 10.0 0.1 1.7 2 0 0 2 2 2 0 Isopentenyl transferase PIF1 PF05970.14 gi|452209951|ref|YP_007490065.1| - 0.17 11.0 0.0 0.21 10.7 0.0 1.2 1 0 0 1 1 1 0 PIF1-like helicase ZnuA PF01297.17 gi|452209951|ref|YP_007490065.1| - 0.17 11.3 0.1 1.8 7.9 0.0 2.0 1 1 1 2 2 2 0 Zinc-uptake complex component A periplasmic ResIII PF04851.15 gi|452209951|ref|YP_007490065.1| - 0.18 11.8 0.0 0.23 11.4 0.0 1.3 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit Inos-1-P_synth PF01658.17 gi|452209952|ref|YP_007490066.1| - 1.3e-32 112.2 0.0 2.3e-32 111.5 0.0 1.4 1 0 0 1 1 1 1 Myo-inositol-1-phosphate synthase NAD_binding_5 PF07994.12 gi|452209952|ref|YP_007490066.1| - 0.0041 16.5 0.0 0.01 15.2 0.0 1.7 2 0 0 2 2 2 1 Myo-inositol-1-phosphate synthase DUF1611_N PF17396.2 gi|452209952|ref|YP_007490066.1| - 0.13 12.5 0.0 0.28 11.4 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1611_N) Rossmann-like domain Sec61_beta PF03911.16 gi|452209954|ref|YP_007490068.1| - 1.7e-15 56.7 0.1 2e-15 56.5 0.1 1.1 1 0 0 1 1 1 1 Sec61beta family AXE1 PF05448.12 gi|452209955|ref|YP_007490069.1| - 7.7e-10 37.9 0.0 3.7e-09 35.7 0.0 1.8 1 1 0 1 1 1 1 Acetyl xylan esterase (AXE1) Peptidase_S9 PF00326.21 gi|452209955|ref|YP_007490069.1| - 5.9e-07 29.2 0.0 2.4e-05 23.9 0.0 2.1 1 1 0 1 1 1 1 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 gi|452209955|ref|YP_007490069.1| - 6.1e-05 22.4 0.0 0.00023 20.5 0.0 1.7 1 1 1 2 2 2 1 Serine aminopeptidase, S33 DLH PF01738.18 gi|452209955|ref|YP_007490069.1| - 0.0014 18.2 0.0 0.0016 18.0 0.0 1.2 1 0 0 1 1 1 1 Dienelactone hydrolase family Abhydrolase_3 PF07859.13 gi|452209955|ref|YP_007490069.1| - 0.0056 16.6 0.0 0.011 15.6 0.0 1.3 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_1 PF00561.20 gi|452209955|ref|YP_007490069.1| - 0.075 12.7 0.0 0.18 11.4 0.0 1.6 1 1 0 1 1 1 0 alpha/beta hydrolase fold BAAT_C PF08840.11 gi|452209955|ref|YP_007490069.1| - 0.094 12.6 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal UBM PF14377.6 gi|452209955|ref|YP_007490069.1| - 0.19 11.2 0.7 0.79 9.3 0.2 2.3 2 0 0 2 2 2 0 Ubiquitin binding region MutS_V PF00488.21 gi|452209956|ref|YP_007490070.1| - 1.4e-07 31.8 0.0 2.4e-07 31.0 0.0 1.3 1 0 0 1 1 1 1 MutS domain V HHH_5 PF14520.6 gi|452209956|ref|YP_007490070.1| - 1.9e-05 25.2 0.2 0.00079 20.0 0.0 3.0 2 0 0 2 2 2 1 Helix-hairpin-helix domain AAA_23 PF13476.6 gi|452209956|ref|YP_007490070.1| - 0.078 13.5 3.0 1.5 9.2 0.0 2.6 2 0 0 2 2 2 0 AAA domain HHH_2 PF12826.7 gi|452209956|ref|YP_007490070.1| - 0.11 12.6 3.8 0.16 12.1 0.1 2.9 3 0 0 3 3 3 0 Helix-hairpin-helix motif PP_kinase PF02503.17 gi|452209958|ref|YP_007490072.1| - 1.7e-63 213.9 0.0 2.7e-63 213.2 0.0 1.3 1 0 0 1 1 1 1 Polyphosphate kinase middle domain PP_kinase_N PF13089.6 gi|452209958|ref|YP_007490072.1| - 2.4e-34 117.9 0.1 3.9e-34 117.2 0.1 1.3 1 0 0 1 1 1 1 Polyphosphate kinase N-terminal domain PP_kinase_C PF13090.6 gi|452209958|ref|YP_007490072.1| - 1.7e-21 76.4 0.0 2.7e-21 75.8 0.0 1.3 1 0 0 1 1 1 1 Polyphosphate kinase C-terminal domain 2 Ppx-GppA PF02541.16 gi|452209959|ref|YP_007490073.1| - 2.2e-64 217.7 0.9 3.8e-64 216.9 0.9 1.3 1 0 0 1 1 1 1 Ppx/GppA phosphatase family HD PF01966.22 gi|452209959|ref|YP_007490073.1| - 2.1e-10 40.9 2.2 3.4e-10 40.2 1.0 2.0 2 0 0 2 2 2 1 HD domain FtsA PF14450.6 gi|452209959|ref|YP_007490073.1| - 0.00073 19.9 0.0 0.0089 16.4 0.0 2.6 2 1 0 2 2 2 1 Cell division protein FtsA Hydantoinase_A PF01968.18 gi|452209959|ref|YP_007490073.1| - 0.088 12.1 0.1 0.21 10.8 0.0 1.6 1 1 0 1 1 1 0 Hydantoinase/oxoprolinase AAA_16 PF13191.6 gi|452209960|ref|YP_007490074.1| - 1.9e-12 47.9 0.0 3.2e-10 40.6 0.0 3.0 2 1 0 2 2 2 1 AAA ATPase domain AAA_7 PF12775.7 gi|452209960|ref|YP_007490074.1| - 8.3e-06 25.4 0.0 0.00034 20.2 0.0 2.2 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA PF00004.29 gi|452209960|ref|YP_007490074.1| - 9.6e-06 26.1 0.0 2.1e-05 24.9 0.0 1.6 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Cdc6_C PF09079.11 gi|452209960|ref|YP_007490074.1| - 1.8e-05 24.6 0.1 5.3e-05 23.1 0.1 1.8 1 1 0 1 1 1 1 CDC6, C terminal winged helix domain AAA_11 PF13086.6 gi|452209960|ref|YP_007490074.1| - 0.00023 21.1 0.0 0.00037 20.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|452209960|ref|YP_007490074.1| - 0.00031 21.0 0.0 0.00059 20.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain DUF815 PF05673.13 gi|452209960|ref|YP_007490074.1| - 0.015 14.4 0.0 0.075 12.2 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF815) TniB PF05621.11 gi|452209960|ref|YP_007490074.1| - 0.03 13.8 0.0 0.048 13.1 0.0 1.4 1 0 0 1 1 1 0 Bacterial TniB protein AAA_30 PF13604.6 gi|452209960|ref|YP_007490074.1| - 0.033 13.9 0.0 0.057 13.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|452209960|ref|YP_007490074.1| - 0.033 13.9 0.0 2.6 7.7 0.0 2.5 2 0 0 2 2 2 0 IstB-like ATP binding protein Zeta_toxin PF06414.12 gi|452209960|ref|YP_007490074.1| - 0.035 13.4 0.0 0.074 12.3 0.0 1.5 1 1 0 1 1 1 0 Zeta toxin AAA_19 PF13245.6 gi|452209960|ref|YP_007490074.1| - 0.037 14.4 0.0 0.094 13.0 0.0 1.7 1 0 0 1 1 1 0 AAA domain TIP49_C PF17856.1 gi|452209960|ref|YP_007490074.1| - 0.055 13.6 0.0 0.14 12.3 0.0 1.7 1 0 0 1 1 1 0 TIP49 AAA-lid domain AAA_5 PF07728.14 gi|452209960|ref|YP_007490074.1| - 0.055 13.5 0.0 0.14 12.2 0.0 1.7 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) DUF835 PF05763.12 gi|452209960|ref|YP_007490074.1| - 0.055 13.2 0.0 0.093 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF835) AAA_24 PF13479.6 gi|452209960|ref|YP_007490074.1| - 0.067 12.9 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_32 PF13654.6 gi|452209960|ref|YP_007490074.1| - 0.074 11.8 0.0 1.4 7.6 0.0 2.1 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 gi|452209960|ref|YP_007490074.1| - 0.11 11.7 0.0 0.19 10.9 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain RuvB_N PF05496.12 gi|452209960|ref|YP_007490074.1| - 0.14 11.8 0.0 0.26 11.0 0.0 1.5 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain Cpn60_TCP1 PF00118.24 gi|452209961|ref|YP_007490075.1| - 1.9e-182 607.3 20.7 2.2e-182 607.1 20.7 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family HSP70 PF00012.20 gi|452209962|ref|YP_007490076.1| - 2.4e-176 587.5 3.9 7.2e-174 579.3 3.9 2.0 1 1 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 gi|452209962|ref|YP_007490076.1| - 7.2e-14 51.3 0.6 1.3e-13 50.5 0.6 1.4 1 0 0 1 1 1 1 MreB/Mbl protein DnaJ PF00226.31 gi|452209963|ref|YP_007490077.1| - 1.5e-18 66.7 6.5 2.4e-18 66.0 6.5 1.4 1 0 0 1 1 1 1 DnaJ domain DUF169 PF02596.15 gi|452209964|ref|YP_007490078.1| - 3.4e-27 95.7 0.0 4.3e-27 95.4 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 DUF3721 PF12518.8 gi|452209964|ref|YP_007490078.1| - 0.35 10.7 1.3 5.2 7.0 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function tRNA-synt_2d PF01409.20 gi|452209965|ref|YP_007490079.1| - 6.5e-54 183.0 0.0 9e-49 166.2 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) SepRS_C PF18006.1 gi|452209965|ref|YP_007490079.1| - 2.7e-13 49.7 0.0 7.3e-13 48.4 0.0 1.8 1 0 0 1 1 1 1 O-phosphoseryl-tRNA synthetase C-terminal domain tRNA_synthFbeta PF17759.1 gi|452209965|ref|YP_007490079.1| - 1.4e-09 37.7 0.0 1e-05 25.1 0.0 2.2 2 0 0 2 2 2 2 Phenylalanyl tRNA synthetase beta chain CLM domain Lambda_Bor PF06291.11 gi|452209965|ref|YP_007490079.1| - 0.067 13.2 0.0 0.17 12.0 0.0 1.6 1 0 0 1 1 1 0 Bor protein Styelin PF17562.2 gi|452209965|ref|YP_007490079.1| - 0.076 13.4 0.0 0.36 11.2 0.0 2.0 2 0 0 2 2 2 0 Styelin UPF0147 PF03685.13 gi|452209969|ref|YP_007490083.1| - 3e-21 75.3 0.5 3.2e-21 75.2 0.5 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0147) Auto_anti-p27 PF06677.12 gi|452209970|ref|YP_007490084.1| - 6e-12 45.5 0.3 9e-12 45.0 0.3 1.3 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) NusG PF02357.19 gi|452209970|ref|YP_007490084.1| - 0.095 13.2 0.0 0.29 11.7 0.0 1.8 2 0 0 2 2 2 0 Transcription termination factor nusG Pox_Ag35 PF03286.14 gi|452209970|ref|YP_007490084.1| - 1.2 8.9 7.4 1.5 8.6 7.4 1.2 1 0 0 1 1 1 0 Pox virus Ag35 surface protein PGBA_C PF15437.6 gi|452209970|ref|YP_007490084.1| - 3.6 8.0 12.6 4.1 7.8 10.8 1.9 2 0 0 2 2 2 0 Plasminogen-binding protein pgbA C-terminal ERCC4 PF02732.15 gi|452209972|ref|YP_007490086.1| - 1.3e-25 90.4 0.0 4.8e-25 88.6 0.0 2.1 1 0 0 1 1 1 1 ERCC4 domain Helicase_C PF00271.31 gi|452209972|ref|YP_007490086.1| - 3.5e-25 88.5 0.0 5.7e-21 74.9 0.0 2.6 2 0 0 2 2 2 2 Helicase conserved C-terminal domain DEAD PF00270.29 gi|452209972|ref|YP_007490086.1| - 2.3e-17 63.3 0.0 7e-17 61.7 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase HHH_5 PF14520.6 gi|452209972|ref|YP_007490086.1| - 5e-15 55.8 0.0 5.4e-14 52.5 0.1 2.6 2 0 0 2 2 2 1 Helix-hairpin-helix domain ResIII PF04851.15 gi|452209972|ref|YP_007490086.1| - 1.2e-14 54.7 0.0 4.1e-14 53.0 0.0 1.9 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit HHH_2 PF12826.7 gi|452209972|ref|YP_007490086.1| - 4.6e-12 45.8 0.0 1.4e-11 44.3 0.0 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH PF00633.23 gi|452209972|ref|YP_007490086.1| - 1.1e-06 28.1 0.1 3.5e-05 23.4 0.1 2.7 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_3 PF12836.7 gi|452209972|ref|YP_007490086.1| - 0.00058 20.1 0.1 0.0056 16.9 0.1 2.8 3 1 0 3 3 3 1 Helix-hairpin-helix motif HHH_8 PF14716.6 gi|452209972|ref|YP_007490086.1| - 0.00082 19.7 0.1 0.0039 17.5 0.1 2.3 1 1 0 1 1 1 1 Helix-hairpin-helix domain 5_3_exonuc PF01367.20 gi|452209972|ref|YP_007490086.1| - 0.0036 17.9 5.0 0.012 16.2 0.0 3.7 3 1 0 3 3 3 1 5'-3' exonuclease, C-terminal SAM fold HGTP_anticodon PF03129.20 gi|452209974|ref|YP_007490088.1| - 2.9e-22 78.6 1.6 4e-21 75.0 0.0 2.9 3 0 0 3 3 3 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|452209974|ref|YP_007490088.1| - 8.2e-09 35.7 0.0 1.6e-08 34.7 0.0 1.6 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Zn-ribbon_8 PF09723.10 gi|452209974|ref|YP_007490088.1| - 7.9 6.7 8.6 9.9 6.4 4.5 2.7 2 1 1 3 3 3 0 Zinc ribbon domain CPBP PF02517.16 gi|452209975|ref|YP_007490089.1| - 3.8e-09 36.8 19.5 1.4e-08 35.0 16.1 2.9 2 1 0 2 2 2 1 CPBP intramembrane metalloprotease DUF4455 PF14643.6 gi|452209977|ref|YP_007490091.1| - 0.11 11.2 0.0 0.11 11.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4455) Gpr1_Fun34_YaaH PF01184.19 gi|452209978|ref|YP_007490092.1| - 1.7e-33 116.0 20.8 2e-33 115.8 20.8 1.1 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family DUF2583 PF10762.9 gi|452209978|ref|YP_007490092.1| - 0.04 14.3 0.9 0.04 14.3 0.9 2.1 2 1 1 3 3 3 0 Protein of unknown function (DUF2583) FixP_N PF14715.6 gi|452209978|ref|YP_007490092.1| - 0.92 9.3 0.0 0.92 9.3 0.0 3.6 4 0 0 4 4 4 0 N-terminal domain of cytochrome oxidase-cbb3, FixP SLATT_fungal PF18142.1 gi|452209978|ref|YP_007490092.1| - 1.4 8.9 4.9 1.7 8.6 0.5 2.4 2 1 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain SurE PF01975.17 gi|452209979|ref|YP_007490093.1| - 3.1e-51 173.9 0.0 3.7e-51 173.7 0.0 1.0 1 0 0 1 1 1 1 Survival protein SurE WW PF00397.26 gi|452209979|ref|YP_007490093.1| - 0.26 11.4 0.5 0.43 10.7 0.5 1.4 1 0 0 1 1 1 0 WW domain Radical_SAM PF04055.21 gi|452209981|ref|YP_007490095.1| - 5.4e-32 111.5 1.8 1.5e-31 110.0 0.2 2.1 2 1 0 2 2 2 1 Radical SAM superfamily Mob_synth_C PF06463.13 gi|452209981|ref|YP_007490095.1| - 2.7e-19 69.3 0.0 4.2e-19 68.7 0.0 1.3 1 0 0 1 1 1 1 Molybdenum Cofactor Synthesis C Fer4_12 PF13353.6 gi|452209981|ref|YP_007490095.1| - 1.6e-08 34.9 0.2 3.4e-08 33.8 0.2 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|452209981|ref|YP_007490095.1| - 5e-05 23.4 0.3 0.00011 22.3 0.3 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain CdhD PF03599.16 gi|452209981|ref|YP_007490095.1| - 0.034 12.9 0.0 0.049 12.3 0.0 1.2 1 0 0 1 1 1 0 CO dehydrogenase/acetyl-CoA synthase delta subunit GATase_3 PF07685.14 gi|452209982|ref|YP_007490096.1| - 1e-32 113.4 0.0 1.4e-32 112.9 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain AAA_26 PF13500.6 gi|452209982|ref|YP_007490096.1| - 7.4e-23 81.4 2.7 7.6e-21 74.8 2.7 2.2 1 1 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|452209982|ref|YP_007490096.1| - 6.2e-20 71.6 0.0 1.1e-19 70.8 0.0 1.4 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain NTPase_1 PF03266.15 gi|452209982|ref|YP_007490096.1| - 0.041 13.8 0.1 1.6 8.6 0.1 2.4 2 0 0 2 2 2 0 NTPase YHYH PF14240.6 gi|452209982|ref|YP_007490096.1| - 0.065 13.2 0.1 1.5 8.7 0.0 2.2 1 1 0 2 2 2 0 YHYH protein DUF1611 PF07755.11 gi|452209982|ref|YP_007490096.1| - 0.091 12.0 0.5 0.24 10.6 0.4 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF1611_C) P-loop domain Fer4_NifH PF00142.18 gi|452209982|ref|YP_007490096.1| - 0.093 12.2 0.1 0.68 9.3 0.0 2.0 2 0 0 2 2 2 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_31 PF13614.6 gi|452209982|ref|YP_007490096.1| - 0.15 11.9 0.4 0.29 11.0 0.4 1.4 1 0 0 1 1 1 0 AAA domain ParA PF10609.9 gi|452209982|ref|YP_007490096.1| - 0.17 11.3 0.3 0.38 10.2 0.3 1.5 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase Glyoxalase_2 PF12681.7 gi|452209983|ref|YP_007490097.1| - 3.2e-25 88.3 0.3 3.9e-25 88.1 0.3 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase PF00903.25 gi|452209983|ref|YP_007490097.1| - 0.00092 19.4 0.0 0.0021 18.3 0.0 1.5 2 0 0 2 2 2 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DUF2172 PF09940.9 gi|452209983|ref|YP_007490097.1| - 0.07 13.5 0.1 1.7 9.1 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF2172) PCNA_N PF00705.18 gi|452209984|ref|YP_007490098.1| - 3.9e-12 46.0 0.7 8.2e-12 44.9 0.2 1.7 2 1 0 2 2 2 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 gi|452209984|ref|YP_007490098.1| - 2.2e-10 40.8 0.0 6.4e-10 39.3 0.0 1.8 2 0 0 2 2 2 1 Proliferating cell nuclear antigen, C-terminal domain Rad9 PF04139.13 gi|452209984|ref|YP_007490098.1| - 0.00013 21.5 0.0 0.00035 20.1 0.0 1.6 2 0 0 2 2 2 1 Rad9 TFIIS_C PF01096.18 gi|452209985|ref|YP_007490099.1| - 1.1e-18 66.8 4.1 1.1e-18 66.8 4.1 2.1 2 0 0 2 2 2 1 Transcription factor S-II (TFIIS) TF_Zn_Ribbon PF08271.12 gi|452209985|ref|YP_007490099.1| - 1.4e-05 24.5 2.3 0.0087 15.6 0.7 2.6 2 1 0 2 2 2 2 TFIIB zinc-binding Zn_Tnp_IS1595 PF12760.7 gi|452209985|ref|YP_007490099.1| - 2.4e-05 24.2 2.9 0.00071 19.5 0.8 2.2 2 0 0 2 2 2 1 Transposase zinc-ribbon domain RNA_POL_M_15KD PF02150.16 gi|452209985|ref|YP_007490099.1| - 0.00016 21.4 11.2 0.05 13.5 0.0 3.2 3 0 0 3 3 3 2 RNA polymerases M/15 Kd subunit Nudix_N_2 PF14803.6 gi|452209985|ref|YP_007490099.1| - 0.00044 20.1 1.3 0.078 12.9 0.1 2.6 2 1 0 2 2 2 1 Nudix N-terminal HypA PF01155.19 gi|452209985|ref|YP_007490099.1| - 0.00087 19.3 1.4 0.029 14.4 0.1 2.1 1 1 1 2 2 2 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Ogr_Delta PF04606.12 gi|452209985|ref|YP_007490099.1| - 0.00091 19.2 3.6 0.0014 18.6 0.9 2.1 2 0 0 2 2 2 1 Ogr/Delta-like zinc finger Zn-ribbon_8 PF09723.10 gi|452209985|ref|YP_007490099.1| - 0.0012 18.9 6.5 1.1 9.4 0.1 3.3 3 0 0 3 3 3 1 Zinc ribbon domain zinc_ribbon_2 PF13240.6 gi|452209985|ref|YP_007490099.1| - 0.0019 17.9 10.3 1.8 8.4 0.5 3.4 3 0 0 3 3 3 1 zinc-ribbon domain zinc_ribbon_4 PF13717.6 gi|452209985|ref|YP_007490099.1| - 0.0022 17.9 6.6 0.38 10.7 0.5 3.3 3 0 0 3 3 3 1 zinc-ribbon domain zinc_ribbon_15 PF17032.5 gi|452209985|ref|YP_007490099.1| - 0.0027 18.4 0.7 0.038 14.7 0.1 2.1 2 0 0 2 2 2 1 zinc-ribbon family zf_UBZ PF18439.1 gi|452209985|ref|YP_007490099.1| - 0.0044 16.6 5.2 0.5 10.0 0.1 3.2 3 0 0 3 3 3 1 Ubiquitin-Binding Zinc Finger YhfH PF14149.6 gi|452209985|ref|YP_007490099.1| - 0.0054 16.7 3.0 7.8 6.6 0.1 3.2 3 0 0 3 3 3 0 YhfH-like protein Zn_ribbon_SprT PF17283.2 gi|452209985|ref|YP_007490099.1| - 0.011 15.6 6.6 0.89 9.5 0.2 3.2 3 0 0 3 3 3 0 SprT-like zinc ribbon domain Ribosomal_S27e PF01667.17 gi|452209985|ref|YP_007490099.1| - 0.012 15.3 1.1 3.3 7.5 0.0 3.0 3 0 0 3 3 3 0 Ribosomal protein S27 DZR PF12773.7 gi|452209985|ref|YP_007490099.1| - 0.012 15.6 6.0 0.45 10.6 6.0 2.3 1 1 0 1 1 1 0 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|452209985|ref|YP_007490099.1| - 0.013 14.9 11.9 0.53 9.8 0.5 3.3 3 0 0 3 3 3 0 zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|452209985|ref|YP_007490099.1| - 0.013 15.4 7.3 0.017 15.0 2.0 2.5 1 1 0 2 2 2 0 Putative transposase DNA-binding domain Rubredoxin_2 PF18073.1 gi|452209985|ref|YP_007490099.1| - 0.014 15.1 12.2 2.4 8.0 0.8 3.2 3 0 0 3 3 3 0 Rubredoxin metal binding domain zf-CHY PF05495.12 gi|452209985|ref|YP_007490099.1| - 0.015 15.7 1.0 0.12 12.8 1.0 2.0 1 1 0 1 1 1 0 CHY zinc finger zf-3CxxC_2 PF17180.4 gi|452209985|ref|YP_007490099.1| - 0.017 15.9 7.8 7.6 7.3 0.0 3.2 2 1 1 3 3 3 0 Zinc-binding domain FdhE PF04216.12 gi|452209985|ref|YP_007490099.1| - 0.023 14.6 1.2 0.023 14.6 0.5 1.3 1 1 0 1 1 1 0 Protein involved in formate dehydrogenase formation DUF3268 PF11672.8 gi|452209985|ref|YP_007490099.1| - 0.03 14.7 1.2 1.2 9.5 0.3 2.1 2 0 0 2 2 2 0 zinc-finger-containing domain UPF0547 PF10571.9 gi|452209985|ref|YP_007490099.1| - 0.031 14.3 8.3 4.6 7.4 0.2 3.2 3 0 0 3 3 3 0 Uncharacterised protein family UPF0547 zf-ZPR1 PF03367.13 gi|452209985|ref|YP_007490099.1| - 0.034 14.0 0.3 0.072 12.9 0.0 1.6 2 0 0 2 2 2 0 ZPR1 zinc-finger domain GFA PF04828.14 gi|452209985|ref|YP_007490099.1| - 0.046 14.1 5.3 0.29 11.5 0.7 2.8 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme DNA_RNApol_7kD PF03604.13 gi|452209985|ref|YP_007490099.1| - 0.046 13.4 5.9 6.2 6.6 0.2 3.2 3 0 0 3 3 3 0 DNA directed RNA polymerase, 7 kDa subunit DUF2387 PF09526.10 gi|452209985|ref|YP_007490099.1| - 0.066 13.4 1.5 0.15 12.2 0.5 1.9 2 0 0 2 2 2 0 Probable metal-binding protein (DUF2387) zf-SNAP50_C PF12251.8 gi|452209985|ref|YP_007490099.1| - 0.08 12.6 1.4 0.61 9.7 0.3 2.0 2 0 0 2 2 2 0 snRNA-activating protein of 50kDa MW C terminal zf-LITAF-like PF10601.9 gi|452209985|ref|YP_007490099.1| - 0.094 13.0 1.5 17 5.7 0.0 2.9 3 0 0 3 3 3 0 LITAF-like zinc ribbon domain zf-H2C2_2 PF13465.6 gi|452209985|ref|YP_007490099.1| - 0.14 12.6 8.2 3.9 8.1 0.6 3.2 3 0 0 3 3 3 0 Zinc-finger double domain A2L_zn_ribbon PF08792.10 gi|452209985|ref|YP_007490099.1| - 0.14 11.9 7.5 1.7 8.5 0.0 3.2 3 0 0 3 3 3 0 A2L zinc ribbon domain zf-ACC PF17848.1 gi|452209985|ref|YP_007490099.1| - 0.16 12.1 9.5 2.8 8.1 0.4 3.2 3 0 0 3 3 3 0 Acetyl-coA carboxylase zinc finger domain DiS_P_DiS PF06750.13 gi|452209985|ref|YP_007490099.1| - 0.2 11.8 1.0 17 5.6 0.0 2.7 3 0 0 3 3 3 0 Bacterial Peptidase A24 N-terminal domain zf-RING_4 PF14570.6 gi|452209985|ref|YP_007490099.1| - 0.23 11.3 4.5 2.6 7.9 0.1 2.7 3 0 0 3 3 3 0 RING/Ubox like zinc-binding domain zf-IS66 PF13005.7 gi|452209985|ref|YP_007490099.1| - 0.23 11.9 3.1 22 5.6 0.0 3.0 3 0 0 3 3 3 0 zinc-finger binding domain of transposase IS66 Terminase_GpA PF05876.12 gi|452209985|ref|YP_007490099.1| - 0.29 9.6 5.3 0.24 9.9 1.6 2.0 1 1 0 2 2 2 0 Phage terminase large subunit (GpA) Baculo_LEF5_C PF11792.8 gi|452209985|ref|YP_007490099.1| - 0.31 10.8 0.1 0.31 10.8 0.1 3.0 4 0 0 4 4 3 0 Baculoviridae late expression factor 5 C-terminal domain FYVE PF01363.21 gi|452209985|ref|YP_007490099.1| - 0.4 10.8 5.2 3.9 7.7 5.2 2.2 1 1 0 1 1 1 0 FYVE zinc finger DUF35_N PF12172.8 gi|452209985|ref|YP_007490099.1| - 0.55 10.2 6.9 18 5.3 0.1 3.2 3 0 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) DUF2752 PF10825.8 gi|452209985|ref|YP_007490099.1| - 0.61 10.2 3.6 1.3 9.1 0.0 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF2752) Zn_Tnp_IS91 PF14319.6 gi|452209985|ref|YP_007490099.1| - 1.1 9.4 6.2 1.7 8.7 0.2 2.9 2 1 1 3 3 3 0 Transposase zinc-binding domain zf-C2H2_11 PF16622.5 gi|452209985|ref|YP_007490099.1| - 1.1 9.0 5.5 33 4.4 0.1 3.1 3 0 0 3 3 3 0 zinc-finger C2H2-type zf-C2H2 PF00096.26 gi|452209985|ref|YP_007490099.1| - 1.7 9.3 6.8 36 5.1 0.9 3.2 3 0 0 3 3 3 0 Zinc finger, C2H2 type zf-ISL3 PF14690.6 gi|452209985|ref|YP_007490099.1| - 1.8 9.3 7.1 12 6.7 0.3 3.0 2 1 1 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf-Mss51 PF13824.6 gi|452209985|ref|YP_007490099.1| - 1.8 8.7 12.1 21 5.3 1.2 3.4 2 2 1 3 3 3 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-HIT PF04438.16 gi|452209985|ref|YP_007490099.1| - 2 8.4 11.3 1.2 9.0 0.3 3.1 3 0 0 3 3 3 0 HIT zinc finger zf-tcix PF14952.6 gi|452209985|ref|YP_007490099.1| - 2.7 7.7 10.1 5.1 6.8 0.9 3.1 3 0 0 3 3 3 0 Putative treble-clef, zinc-finger, Zn-binding zinc_ribbon_13 PF09855.9 gi|452209985|ref|YP_007490099.1| - 2.7 8.2 8.9 1e+02 3.2 0.1 3.1 2 1 0 2 2 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) zf-TFIIB PF13453.6 gi|452209985|ref|YP_007490099.1| - 3.5 7.0 7.4 2 7.8 3.0 2.4 2 1 0 2 2 2 0 Transcription factor zinc-finger DUF4916 PF16262.5 gi|452209986|ref|YP_007490100.1| - 0.0031 17.0 0.0 0.0034 16.9 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4916) z-alpha PF02295.17 gi|452209986|ref|YP_007490100.1| - 0.056 13.5 0.0 0.087 12.9 0.0 1.3 1 1 0 1 1 1 0 Adenosine deaminase z-alpha domain Exosortase_EpsH PF09721.10 gi|452209987|ref|YP_007490101.1| - 2.4e-11 43.7 13.6 5.6e-11 42.5 13.6 1.6 1 1 0 1 1 1 1 Transmembrane exosortase (Exosortase_EpsH) PS_Dcarbxylase PF02666.15 gi|452209988|ref|YP_007490102.1| - 2.5e-29 102.3 1.7 9.3e-25 87.3 0.4 2.1 1 1 1 2 2 2 2 Phosphatidylserine decarboxylase RnfC_N PF13375.6 gi|452209988|ref|YP_007490102.1| - 0.0019 18.1 0.8 3.8 7.5 0.0 3.8 1 1 3 4 4 4 1 RnfC Barrel sandwich hybrid domain Peptidase_M23 PF01551.22 gi|452209988|ref|YP_007490102.1| - 0.015 15.5 0.7 8.3 6.7 0.2 3.3 1 1 2 3 3 3 0 Peptidase family M23 HlyD_3 PF13437.6 gi|452209988|ref|YP_007490102.1| - 0.2 12.4 1.0 9.9 6.9 0.0 3.1 3 1 1 4 4 4 0 HlyD family secretion protein CDP-OH_P_transf PF01066.21 gi|452209989|ref|YP_007490103.1| - 3.2e-13 50.2 0.7 3.2e-13 50.2 0.7 3.0 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase DHNA PF04038.12 gi|452209990|ref|YP_007490104.1| - 1.3e-45 154.4 0.0 1.5e-45 154.2 0.0 1.0 1 0 0 1 1 1 1 Dihydroneopterin aldolase Aminotran_1_2 PF00155.21 gi|452209991|ref|YP_007490105.1| - 1e-62 212.5 0.0 1.1e-62 212.3 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|452209991|ref|YP_007490105.1| - 3e-12 46.6 0.0 4.2e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 gi|452209991|ref|YP_007490105.1| - 3.9e-07 29.3 0.0 2.2e-06 26.9 0.0 1.9 2 0 0 2 2 2 1 Aminotransferase class-V Alliinase_C PF04864.13 gi|452209991|ref|YP_007490105.1| - 0.00045 19.2 0.0 0.00081 18.4 0.0 1.3 1 0 0 1 1 1 1 Allinase Cys_Met_Meta_PP PF01053.20 gi|452209991|ref|YP_007490105.1| - 0.0013 17.4 0.0 0.0021 16.7 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Hexapep PF00132.24 gi|452209992|ref|YP_007490106.1| - 2.6e-06 26.9 14.5 3.5e-06 26.5 0.0 5.1 5 2 1 6 6 6 1 Bacterial transferase hexapeptide (six repeats) Bactofilin PF04519.13 gi|452209992|ref|YP_007490106.1| - 3.7e-06 27.1 14.0 2.3e-05 24.6 4.6 3.0 2 2 0 2 2 2 2 Polymer-forming cytoskeletal Phage_spike PF18715.1 gi|452209992|ref|YP_007490106.1| - 0.046 13.8 0.7 11 6.2 0.0 2.6 2 0 0 2 2 2 0 Phage spike trimer MinC_C PF03775.16 gi|452209992|ref|YP_007490106.1| - 0.24 11.4 3.0 1.3 9.1 0.7 2.5 2 0 0 2 2 2 0 Septum formation inhibitor MinC, C-terminal domain Hexapep_2 PF14602.6 gi|452209992|ref|YP_007490106.1| - 3.7 7.4 11.9 34 4.3 0.1 4.2 3 1 2 5 5 5 0 Hexapeptide repeat of succinyl-transferase TGT_C2 PF14810.6 gi|452209994|ref|YP_007490108.1| - 2.3e-28 98.1 0.1 4.5e-28 97.2 0.1 1.5 1 0 0 1 1 1 1 Patch-forming domain C2 of tRNA-guanine transglycosylase PUA PF01472.20 gi|452209994|ref|YP_007490108.1| - 3.8e-14 52.4 0.1 9e-14 51.2 0.1 1.7 2 0 0 2 2 2 1 PUA domain UPF0113 PF03657.13 gi|452209994|ref|YP_007490108.1| - 0.0084 16.4 0.0 0.013 15.7 0.0 1.4 1 0 0 1 1 1 1 UPF0113 PUA domain AbrB_C PF18277.1 gi|452209994|ref|YP_007490108.1| - 0.068 12.8 0.1 8.8 6.1 0.0 2.8 2 1 1 3 3 3 0 AbrB C-terminal domain SUKH_5 PF14567.6 gi|452209997|ref|YP_007490111.1| - 0.037 13.8 0.5 0.19 11.5 0.2 2.0 2 0 0 2 2 2 0 SMI1-KNR4 cell-wall BPL_N PF09825.9 gi|452209998|ref|YP_007490112.1| - 0.032 13.3 0.0 0.049 12.7 0.0 1.2 1 0 0 1 1 1 0 Biotin-protein ligase, N terminal DUF1894 PF08979.11 gi|452209999|ref|YP_007490113.1| - 1.7e-27 95.6 0.1 2e-27 95.4 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1894) DUF1890 PF09001.11 gi|452210000|ref|YP_007490114.1| - 3.8e-56 189.3 0.2 4.3e-56 189.2 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1890) B12-binding PF02310.19 gi|452210000|ref|YP_007490114.1| - 0.14 12.2 0.0 0.19 11.8 0.0 1.3 1 0 0 1 1 1 0 B12 binding domain DUF1894 PF08979.11 gi|452210001|ref|YP_007490115.1| - 5.7e-35 119.5 0.2 6.9e-35 119.3 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1894) AIRS_C PF02769.22 gi|452210002|ref|YP_007490116.1| - 4.8e-19 69.0 0.0 1e-18 67.9 0.0 1.6 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|452210002|ref|YP_007490116.1| - 6.2e-15 55.6 0.2 1.1e-14 54.8 0.2 1.5 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain S4 PF01479.25 gi|452210002|ref|YP_007490116.1| - 0.043 13.5 0.4 0.11 12.2 0.4 1.7 1 0 0 1 1 1 0 S4 domain AA_kinase PF00696.28 gi|452210003|ref|YP_007490117.1| - 1.5e-50 172.0 1.9 2e-50 171.6 0.1 1.9 2 0 0 2 2 2 1 Amino acid kinase family ACT_7 PF13840.6 gi|452210003|ref|YP_007490117.1| - 4.1e-25 87.4 3.2 3.4e-12 46.0 0.1 2.5 2 0 0 2 2 2 2 ACT domain ACT PF01842.25 gi|452210003|ref|YP_007490117.1| - 1.9e-22 78.7 0.7 9.9e-11 41.2 0.1 2.6 2 0 0 2 2 2 2 ACT domain ACT_6 PF13740.6 gi|452210003|ref|YP_007490117.1| - 0.00036 20.5 1.7 0.029 14.3 0.1 3.4 3 0 0 3 3 3 1 ACT domain PPK2 PF03976.14 gi|452210003|ref|YP_007490117.1| - 0.016 14.7 0.2 3.7 7.0 0.0 2.4 1 1 1 2 2 2 0 Polyphosphate kinase 2 (PPK2) PhosphMutase PF10143.9 gi|452210004|ref|YP_007490118.1| - 4.1e-59 199.3 0.0 6e-59 198.7 0.0 1.3 1 0 0 1 1 1 1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Metalloenzyme PF01676.18 gi|452210004|ref|YP_007490118.1| - 4.5e-38 131.0 0.0 5.1e-38 130.9 0.0 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Alk_phosphatase PF00245.20 gi|452210004|ref|YP_007490118.1| - 0.016 14.1 0.1 0.047 12.6 0.0 1.7 2 0 0 2 2 2 0 Alkaline phosphatase Oxidored_FMN PF00724.20 gi|452210004|ref|YP_007490118.1| - 0.2 10.9 0.2 0.34 10.1 0.2 1.3 1 0 0 1 1 1 0 NADH:flavin oxidoreductase / NADH oxidase family Shugoshin_N PF07558.11 gi|452210005|ref|YP_007490119.1| - 0.029 14.2 1.2 0.05 13.5 1.2 1.4 1 0 0 1 1 1 0 Shugoshin N-terminal coiled-coil region HSP20 PF00011.21 gi|452210006|ref|YP_007490120.1| - 9.8e-21 73.8 0.7 1.3e-20 73.5 0.7 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|452210006|ref|YP_007490120.1| - 6.9e-10 38.3 0.0 1e-09 37.8 0.0 1.3 1 0 0 1 1 1 1 HSP20-like domain found in ArsA CS PF04969.16 gi|452210006|ref|YP_007490120.1| - 0.00035 21.5 0.1 0.00064 20.7 0.0 1.5 1 1 0 1 1 1 1 CS domain GvpH PF05455.11 gi|452210006|ref|YP_007490120.1| - 0.041 14.0 0.0 0.059 13.4 0.0 1.4 1 0 0 1 1 1 0 GvpH F420_ligase PF01996.16 gi|452210007|ref|YP_007490121.1| - 5e-62 209.4 0.0 6.1e-62 209.1 0.0 1.0 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase Cupin_2 PF07883.11 gi|452210008|ref|YP_007490122.1| - 3.9e-08 32.9 0.0 5.4e-08 32.4 0.0 1.2 1 0 0 1 1 1 1 Cupin domain EutQ PF06249.12 gi|452210008|ref|YP_007490122.1| - 0.0023 17.7 0.1 0.0028 17.4 0.1 1.3 1 1 0 1 1 1 1 Ethanolamine utilisation protein EutQ AraC_binding PF02311.19 gi|452210008|ref|YP_007490122.1| - 0.048 13.6 0.0 0.061 13.2 0.0 1.1 1 0 0 1 1 1 0 AraC-like ligand binding domain DUF1796 PF08795.10 gi|452210008|ref|YP_007490122.1| - 0.054 13.5 0.0 0.078 12.9 0.0 1.2 1 0 0 1 1 1 0 Putative papain-like cysteine peptidase (DUF1796) Cupin_1 PF00190.22 gi|452210008|ref|YP_007490122.1| - 0.069 12.7 0.0 0.088 12.4 0.0 1.3 1 1 0 1 1 1 0 Cupin Cupin_6 PF12852.7 gi|452210008|ref|YP_007490122.1| - 0.071 12.8 0.0 0.079 12.7 0.0 1.2 1 0 0 1 1 1 0 Cupin Ppnp PF06865.11 gi|452210008|ref|YP_007490122.1| - 0.13 12.7 0.0 0.16 12.4 0.0 1.2 1 0 0 1 1 1 0 Pyrimidine/purine nucleoside phosphorylase dCMP_cyt_deam_1 PF00383.23 gi|452210009|ref|YP_007490123.1| - 5.9e-30 103.1 1.4 7.4e-30 102.8 1.4 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 gi|452210009|ref|YP_007490123.1| - 1.4e-19 70.2 0.1 1.8e-19 69.9 0.1 1.0 1 0 0 1 1 1 1 MafB19-like deaminase Bd3614-deam PF14439.6 gi|452210009|ref|YP_007490123.1| - 0.0014 18.7 0.6 0.0032 17.6 0.3 1.6 1 1 1 2 2 2 1 Bd3614-like deaminase APOBEC_N PF08210.11 gi|452210009|ref|YP_007490123.1| - 0.0059 16.5 0.8 0.014 15.3 0.9 1.4 1 1 0 1 1 1 1 APOBEC-like N-terminal domain OTT_1508_deam PF14441.6 gi|452210009|ref|YP_007490123.1| - 0.042 13.9 0.2 0.065 13.3 0.2 1.3 1 0 0 1 1 1 0 OTT_1508-like deaminase XOO_2897-deam PF14440.6 gi|452210009|ref|YP_007490123.1| - 0.079 13.1 0.1 0.13 12.4 0.1 1.3 1 0 0 1 1 1 0 Xanthomonas XOO_2897-like deaminase zf-C3HC4 PF00097.25 gi|452210009|ref|YP_007490123.1| - 0.082 12.8 3.6 0.25 11.3 3.6 1.9 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) APOBEC3 PF18771.1 gi|452210009|ref|YP_007490123.1| - 0.12 12.5 0.2 0.17 12.0 0.2 1.2 1 0 0 1 1 1 0 APOBEC3 SNAD4 PF18750.1 gi|452210009|ref|YP_007490123.1| - 0.14 12.3 0.2 0.2 11.8 0.2 1.3 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 4 NAD1 PF18778.1 gi|452210009|ref|YP_007490123.1| - 0.2 11.8 0.5 0.26 11.4 0.5 1.2 1 0 0 1 1 1 0 Novel AID APOBEC clade 1 SecD_SecF PF02355.16 gi|452210010|ref|YP_007490124.1| - 8.9e-35 119.8 13.2 1.4e-34 119.1 13.2 1.3 1 0 0 1 1 1 1 Protein export membrane protein Sec_GG PF07549.14 gi|452210010|ref|YP_007490124.1| - 0.0014 18.0 0.4 0.0037 16.7 0.1 1.9 2 0 0 2 2 2 1 SecD/SecF GG Motif Patched PF02460.18 gi|452210010|ref|YP_007490124.1| - 0.084 10.9 16.1 0.13 10.3 16.1 1.2 1 0 0 1 1 1 0 Patched family SecD_SecF PF02355.16 gi|452210011|ref|YP_007490125.1| - 5.1e-14 52.1 7.8 8.9e-14 51.3 7.8 1.3 1 0 0 1 1 1 1 Protein export membrane protein Sec_GG PF07549.14 gi|452210011|ref|YP_007490125.1| - 0.062 12.8 1.3 0.23 11.0 0.5 2.4 2 0 0 2 2 2 0 SecD/SecF GG Motif DNA_pol3_delta2 PF13177.6 gi|452210012|ref|YP_007490126.1| - 5.3e-15 55.6 0.0 7.5e-15 55.1 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase III, delta subunit Rep_fac_C PF08542.11 gi|452210012|ref|YP_007490126.1| - 1.6e-13 50.9 0.1 4.5e-13 49.4 0.1 1.8 1 0 0 1 1 1 1 Replication factor C C-terminal domain AAA PF00004.29 gi|452210012|ref|YP_007490126.1| - 8.1e-11 42.5 0.0 1.7e-10 41.5 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.6 gi|452210012|ref|YP_007490126.1| - 6.9e-05 22.9 0.1 0.00035 20.6 0.1 2.0 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|452210012|ref|YP_007490126.1| - 0.00032 21.0 0.0 0.0011 19.3 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|452210012|ref|YP_007490126.1| - 0.00051 19.8 0.0 0.001 18.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain DNA_pol3_delta PF06144.13 gi|452210012|ref|YP_007490126.1| - 0.0013 18.5 0.0 0.0067 16.2 0.0 2.0 2 0 0 2 2 2 1 DNA polymerase III, delta subunit ATPase_2 PF01637.18 gi|452210012|ref|YP_007490126.1| - 0.0014 18.6 0.0 0.0039 17.1 0.0 1.6 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_16 PF13191.6 gi|452210012|ref|YP_007490126.1| - 0.0027 18.1 0.1 0.02 15.3 0.0 2.3 2 1 0 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 gi|452210012|ref|YP_007490126.1| - 0.0048 16.7 0.2 0.25 11.1 0.0 3.0 2 1 1 3 3 3 1 Holliday junction DNA helicase RuvB P-loop domain TIP49 PF06068.13 gi|452210012|ref|YP_007490126.1| - 0.0072 15.6 0.0 0.015 14.6 0.0 1.5 1 0 0 1 1 1 1 TIP49 P-loop domain Rad17 PF03215.15 gi|452210012|ref|YP_007490126.1| - 0.008 16.1 0.0 0.012 15.5 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_25 PF13481.6 gi|452210012|ref|YP_007490126.1| - 0.022 14.3 0.0 0.12 12.0 0.0 2.3 2 1 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 gi|452210012|ref|YP_007490126.1| - 0.036 14.4 0.0 0.068 13.6 0.0 1.5 1 0 0 1 1 1 0 RNA helicase AAA_assoc_2 PF16193.5 gi|452210012|ref|YP_007490126.1| - 0.046 14.1 1.7 0.29 11.5 0.2 2.5 2 0 0 2 2 2 0 AAA C-terminal domain CLP1_P PF16575.5 gi|452210012|ref|YP_007490126.1| - 0.049 13.4 0.0 5.5 6.7 0.0 2.2 1 1 1 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_23 PF13476.6 gi|452210012|ref|YP_007490126.1| - 0.053 14.0 0.2 0.09 13.3 0.2 1.8 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|452210012|ref|YP_007490126.1| - 0.12 12.9 0.0 0.29 11.7 0.0 1.8 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|452210012|ref|YP_007490126.1| - 0.14 12.3 0.0 0.34 11.1 0.0 1.6 1 1 0 1 1 1 0 AAA domain TPR_19 PF14559.6 gi|452210012|ref|YP_007490126.1| - 0.39 11.3 2.5 2.4 8.7 0.2 3.3 4 1 0 4 4 4 0 Tetratricopeptide repeat DUF4245 PF14030.6 gi|452210013|ref|YP_007490127.1| - 0.0049 16.9 0.0 0.006 16.6 0.0 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF4245) PepSY PF03413.19 gi|452210013|ref|YP_007490127.1| - 0.11 13.1 0.4 17 6.1 0.2 2.5 2 1 0 2 2 2 0 Peptidase propeptide and YPEB domain UPF0228 PF05727.11 gi|452210014|ref|YP_007490128.1| - 3.1e-39 133.6 6.1 3.7e-39 133.4 4.2 1.8 1 1 1 2 2 2 1 Uncharacterised protein family (UPF0228) DIX PF00778.17 gi|452210014|ref|YP_007490128.1| - 0.013 15.3 0.2 0.032 14.0 0.2 1.7 1 0 0 1 1 1 0 DIX domain RE_LlaMI PF09562.10 gi|452210014|ref|YP_007490128.1| - 0.017 14.7 2.3 0.042 13.4 2.0 1.8 1 1 0 1 1 1 0 LlaMI restriction endonuclease HTH_19 PF12844.7 gi|452210014|ref|YP_007490128.1| - 0.048 13.7 0.1 1.6 8.8 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain DDE_Tnp_1 PF01609.21 gi|452210015|ref|YP_007490129.1| - 1.1e-06 28.5 4.5 1.2e-06 28.3 4.5 1.0 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_2 PF13586.6 gi|452210015|ref|YP_007490129.1| - 0.046 14.1 2.9 0.077 13.4 2.9 1.5 1 1 0 1 1 1 0 Transposase DDE domain TAT_signal PF10518.9 gi|452210016|ref|YP_007490130.1| - 0.33 10.9 1.1 0.36 10.7 0.1 1.6 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence DUF2583 PF10762.9 gi|452210019|ref|YP_007490133.1| - 0.0026 18.1 0.7 0.0034 17.8 0.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2583) AA_permease PF00324.21 gi|452210020|ref|YP_007490134.1| - 4.4e-39 134.4 44.9 5.6e-39 134.0 44.9 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 gi|452210020|ref|YP_007490134.1| - 4.8e-21 75.1 47.3 1.6e-20 73.4 47.2 1.7 1 1 1 2 2 2 1 Amino acid permease Herpes_LMP1 PF05297.11 gi|452210020|ref|YP_007490134.1| - 0.24 10.5 13.3 0.032 13.5 3.7 3.0 3 0 0 3 3 3 0 Herpesvirus latent membrane protein 1 (LMP1) B12-binding_2 PF02607.17 gi|452210022|ref|YP_007490136.1| - 7.1e-22 77.6 0.0 8.5e-22 77.4 0.0 1.1 1 0 0 1 1 1 1 B12 binding domain RsbU_N PF08673.10 gi|452210022|ref|YP_007490136.1| - 0.025 14.7 0.0 0.04 14.0 0.0 1.6 1 1 0 1 1 1 0 Phosphoserine phosphatase RsbU, N-terminal domain URO-D PF01208.17 gi|452210024|ref|YP_007490138.1| - 1.2e-64 218.6 0.1 1.4e-64 218.5 0.1 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) Flot PF15975.5 gi|452210024|ref|YP_007490138.1| - 0.002 18.3 0.1 0.01 16.0 0.0 2.0 2 0 0 2 2 2 1 Flotillin RACo_C_ter PF14574.6 gi|452210025|ref|YP_007490139.1| - 2.5e-72 243.1 1.9 7.4e-72 241.5 1.9 1.7 1 1 0 1 1 1 1 C-terminal domain of RACo the ASKHA domain Raco_middle PF17651.1 gi|452210025|ref|YP_007490139.1| - 1.1e-10 41.5 0.0 2.3e-10 40.4 0.0 1.5 1 0 0 1 1 1 1 RACo middle region Fer4 PF00037.27 gi|452210025|ref|YP_007490139.1| - 3e-10 39.5 9.6 1.4e-05 24.7 2.7 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|452210025|ref|YP_007490139.1| - 1.5e-08 34.3 11.7 1.9e-06 27.7 1.2 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|452210025|ref|YP_007490139.1| - 1.5e-08 34.6 10.6 2.8e-08 33.7 10.6 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|452210025|ref|YP_007490139.1| - 5.2e-08 33.4 11.6 1e-07 32.5 11.6 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452210025|ref|YP_007490139.1| - 3.9e-07 30.1 11.8 6.5e-07 29.4 11.8 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452210025|ref|YP_007490139.1| - 2.4e-06 28.4 12.4 0.013 16.4 4.2 2.5 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|452210025|ref|YP_007490139.1| - 5.5e-06 26.4 12.8 2.4e-05 24.3 13.2 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452210025|ref|YP_007490139.1| - 7.9e-06 25.7 10.9 0.0012 18.9 2.2 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|452210025|ref|YP_007490139.1| - 0.0047 17.8 15.4 0.3 12.1 3.9 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|452210025|ref|YP_007490139.1| - 0.044 14.2 13.8 0.25 11.8 13.9 2.1 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|452210025|ref|YP_007490139.1| - 0.12 12.9 13.8 0.46 11.1 4.0 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|452210025|ref|YP_007490139.1| - 1 9.9 15.6 2.6 8.6 5.3 2.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|452210025|ref|YP_007490139.1| - 3.3 7.9 11.3 2.7 8.2 1.9 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|452210025|ref|YP_007490139.1| - 6.1 7.5 12.8 35 5.0 12.8 2.1 1 1 0 1 1 1 0 4Fe-4S single cluster domain of Ferredoxin I Pyrophosphatase PF00719.19 gi|452210026|ref|YP_007490140.1| - 1.2e-55 187.7 0.1 1.4e-55 187.5 0.1 1.0 1 0 0 1 1 1 1 Inorganic pyrophosphatase NAD_binding_2 PF03446.15 gi|452210027|ref|YP_007490141.1| - 0.0021 18.2 0.0 0.0049 17.0 0.0 1.7 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase UDPG_MGDP_dh_N PF03721.14 gi|452210027|ref|YP_007490141.1| - 0.056 13.0 0.0 0.097 12.2 0.0 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Mur_ligase PF01225.25 gi|452210027|ref|YP_007490141.1| - 0.074 13.4 0.3 2.9 8.3 0.0 2.3 1 1 1 2 2 2 0 Mur ligase family, catalytic domain ATP-grasp_3 PF02655.14 gi|452210028|ref|YP_007490142.1| - 5.7e-08 33.0 0.0 1e-07 32.1 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|452210028|ref|YP_007490142.1| - 0.00063 19.3 0.0 0.0011 18.5 0.0 1.4 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus ATPgrasp_Ter PF15632.6 gi|452210028|ref|YP_007490142.1| - 0.0015 18.3 0.0 0.0054 16.5 0.0 1.8 2 0 0 2 2 2 1 ATP-grasp in the biosynthetic pathway with Ter operon GIDA PF01134.22 gi|452210028|ref|YP_007490142.1| - 0.11 11.6 0.0 0.14 11.2 0.0 1.1 1 0 0 1 1 1 0 Glucose inhibited division protein A ATP-grasp_4 PF13535.6 gi|452210028|ref|YP_007490142.1| - 0.13 11.9 1.2 7.6 6.1 0.4 2.4 1 1 1 2 2 2 0 ATP-grasp domain Radical_SAM PF04055.21 gi|452210029|ref|YP_007490143.1| - 1.9e-09 38.1 0.5 6.8e-09 36.3 0.2 2.0 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|452210029|ref|YP_007490143.1| - 0.00042 20.4 0.2 0.00077 19.6 0.2 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|452210029|ref|YP_007490143.1| - 0.0041 17.4 0.2 0.0071 16.6 0.2 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain BATS PF06968.13 gi|452210029|ref|YP_007490143.1| - 0.031 14.4 0.2 0.14 12.3 0.0 2.1 3 0 0 3 3 3 0 Biotin and Thiamin Synthesis associated domain SQHop_cyclase_C PF13243.6 gi|452210030|ref|YP_007490144.1| - 1.7e-05 24.1 1.4 0.00082 18.6 0.2 2.6 1 1 1 2 2 2 2 Squalene-hopene cyclase C-terminal domain Prenyltrans PF00432.21 gi|452210030|ref|YP_007490144.1| - 0.042 13.6 6.4 5.3 6.9 1.8 4.6 3 1 0 3 3 3 0 Prenyltransferase and squalene oxidase repeat GARP PF16731.5 gi|452210030|ref|YP_007490144.1| - 0.21 11.3 0.0 0.37 10.5 0.0 1.4 1 0 0 1 1 1 0 Glutamic acid/alanine-rich protein of Trypanosoma DUF134 PF02001.16 gi|452210031|ref|YP_007490145.1| - 1.3e-11 44.9 0.0 2e-11 44.3 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function DUF134 zf-C4_Topoisom PF01396.19 gi|452210031|ref|YP_007490145.1| - 0.078 12.8 1.0 0.078 12.8 1.0 2.6 3 0 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger Sigma70_r4 PF04545.16 gi|452210031|ref|YP_007490145.1| - 0.096 12.2 0.1 0.18 11.3 0.1 1.5 1 1 0 1 1 1 0 Sigma-70, region 4 A2L_zn_ribbon PF08792.10 gi|452210031|ref|YP_007490145.1| - 0.13 12.0 5.4 1.4 8.8 0.2 2.2 2 0 0 2 2 2 0 A2L zinc ribbon domain Auto_anti-p27 PF06677.12 gi|452210031|ref|YP_007490145.1| - 0.52 10.5 5.6 4.6 7.5 0.7 2.3 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) HypA PF01155.19 gi|452210031|ref|YP_007490145.1| - 1.4 8.9 5.6 1.2 9.1 3.9 1.7 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA OrfB_Zn_ribbon PF07282.11 gi|452210031|ref|YP_007490145.1| - 3.8 7.5 5.4 6.2 6.8 5.4 1.3 1 0 0 1 1 1 0 Putative transposase DNA-binding domain DUF5320 PF17253.2 gi|452210031|ref|YP_007490145.1| - 8.1 7.6 18.7 1.1 10.3 13.4 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5320) Radical_SAM PF04055.21 gi|452210032|ref|YP_007490146.1| - 7.1e-13 49.3 0.1 1.6e-12 48.1 0.1 1.6 1 0 0 1 1 1 1 Radical SAM superfamily FliG_N PF14842.6 gi|452210032|ref|YP_007490146.1| - 0.005 17.4 0.9 0.27 11.8 0.1 3.2 3 1 0 3 3 3 1 FliG N-terminal domain Usp PF00582.26 gi|452210033|ref|YP_007490147.1| - 5.2e-18 65.9 0.1 6.2e-18 65.7 0.1 1.1 1 0 0 1 1 1 1 Universal stress protein family Usp PF00582.26 gi|452210034|ref|YP_007490148.1| - 9.7e-35 120.1 0.4 2.9e-34 118.6 0.3 1.7 1 1 1 2 2 2 1 Universal stress protein family DNA_photolyase PF00875.18 gi|452210034|ref|YP_007490148.1| - 0.02 14.9 0.0 0.028 14.4 0.0 1.3 1 0 0 1 1 1 0 DNA photolyase Usp PF00582.26 gi|452210035|ref|YP_007490149.1| - 4.2e-35 121.3 0.1 4.8e-35 121.1 0.1 1.0 1 0 0 1 1 1 1 Universal stress protein family Nitro_FeMo-Co PF02579.17 gi|452210035|ref|YP_007490149.1| - 0.037 14.4 0.1 0.26 11.6 0.0 2.2 1 1 1 2 2 2 0 Dinitrogenase iron-molybdenum cofactor TfuA PF07812.12 gi|452210036|ref|YP_007490150.1| - 2.9e-46 156.1 0.0 6.5e-46 155.0 0.0 1.6 1 0 0 1 1 1 1 TfuA-like protein DUF1707 PF08044.11 gi|452210036|ref|YP_007490150.1| - 0.15 12.2 0.0 0.35 11.0 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1707) SHOCT PF09851.9 gi|452210036|ref|YP_007490150.1| - 0.31 10.8 2.6 2.1 8.2 1.3 2.6 2 0 0 2 2 2 0 Short C-terminal domain YcaO PF02624.16 gi|452210037|ref|YP_007490151.1| - 3.1e-81 273.2 0.0 3.7e-81 272.9 0.0 1.1 1 0 0 1 1 1 1 YcaO cyclodehydratase, ATP-ad Mg2+-binding DUF2892 PF11127.8 gi|452210038|ref|YP_007490152.1| - 4.5e-12 45.8 0.1 5.4e-12 45.6 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2892) Glucos_trans_II PF14264.6 gi|452210038|ref|YP_007490152.1| - 0.013 14.9 1.2 0.013 14.9 1.2 1.0 1 0 0 1 1 1 0 Glucosyl transferase GtrII LPG_synthase_TM PF03706.13 gi|452210040|ref|YP_007490154.1| - 0.0048 16.5 2.4 0.0056 16.2 2.4 1.0 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region PhoR PF11808.8 gi|452210040|ref|YP_007490154.1| - 0.085 13.3 0.0 0.085 13.3 0.0 2.0 3 0 0 3 3 3 0 Phosphate regulon sensor protein PhoR TspO_MBR PF03073.15 gi|452210040|ref|YP_007490154.1| - 0.47 10.5 6.5 0.32 11.0 0.6 2.1 2 0 0 2 2 2 0 TspO/MBR family DUF2207 PF09972.9 gi|452210040|ref|YP_007490154.1| - 7.9 5.1 12.6 2.2e+02 0.4 12.6 2.0 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) E1-E2_ATPase PF00122.20 gi|452210041|ref|YP_007490155.1| - 1.2e-51 174.8 4.9 1.2e-51 174.8 4.9 1.8 2 0 0 2 2 2 1 E1-E2 ATPase Hydrolase PF00702.26 gi|452210041|ref|YP_007490155.1| - 2.3e-36 126.1 0.1 6e-36 124.7 0.1 1.7 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|452210041|ref|YP_007490155.1| - 0.011 16.2 0.0 0.026 14.9 0.0 1.6 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase GAPES4 PF17157.4 gi|452210041|ref|YP_007490155.1| - 0.029 14.8 0.1 0.063 13.7 0.1 1.6 1 0 0 1 1 1 0 Gammaproteobacterial periplasmic sensor domain Ail_Lom PF06316.11 gi|452210041|ref|YP_007490155.1| - 0.18 11.5 0.0 0.41 10.3 0.0 1.6 1 0 0 1 1 1 0 Enterobacterial Ail/Lom protein Oxidored_q2 PF00420.24 gi|452210041|ref|YP_007490155.1| - 0.2 11.3 4.6 5.6 6.7 0.1 2.8 2 1 1 3 3 3 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ProQ_C PF17516.2 gi|452210041|ref|YP_007490155.1| - 1.2 8.6 4.6 0.29 10.6 0.4 2.1 3 0 0 3 3 3 0 ProQ C-terminal domain tRNA-synt_2d PF01409.20 gi|452210042|ref|YP_007490156.1| - 7e-90 300.8 0.0 9.4e-90 300.4 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA_synthFbeta PF17759.1 gi|452210042|ref|YP_007490156.1| - 2.3e-08 33.8 0.0 3.1e-06 26.8 0.0 2.4 2 0 0 2 2 2 2 Phenylalanyl tRNA synthetase beta chain CLM domain tRNA-synt_2 PF00152.20 gi|452210042|ref|YP_007490156.1| - 0.001 18.2 1.8 0.028 13.5 0.0 2.9 4 0 0 4 4 4 2 tRNA synthetases class II (D, K and N) tRNA-synt_1b PF00579.25 gi|452210043|ref|YP_007490157.1| - 5.2e-33 114.6 0.0 4.6e-18 65.6 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (W and Y) Polbeta PF18765.1 gi|452210044|ref|YP_007490158.1| - 8e-19 67.5 0.9 1.1e-18 67.1 0.9 1.2 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase DUF86 PF01934.17 gi|452210045|ref|YP_007490159.1| - 1e-29 102.8 0.1 1.2e-29 102.6 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF86 Radical_SAM PF04055.21 gi|452210046|ref|YP_007490160.1| - 2e-10 41.3 0.0 3.6e-10 40.5 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily SPASM PF13186.6 gi|452210046|ref|YP_007490160.1| - 9e-06 26.1 0.0 1.7e-05 25.2 0.0 1.4 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain NAD_binding_2 PF03446.15 gi|452210046|ref|YP_007490160.1| - 0.0008 19.6 0.0 0.0015 18.7 0.0 1.4 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase eIF-5_eIF-2B PF01873.17 gi|452210048|ref|YP_007490162.1| - 4.2e-38 129.8 0.0 6.1e-38 129.3 0.0 1.2 1 0 0 1 1 1 1 Domain found in IF2B/IF5 TRAM PF01938.20 gi|452210048|ref|YP_007490162.1| - 7.4e-12 45.1 0.6 2e-11 43.7 0.6 1.7 1 0 0 1 1 1 1 TRAM domain DUF4265 PF14085.6 gi|452210048|ref|YP_007490162.1| - 0.038 13.9 0.1 0.17 11.9 0.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4265) NMD3 PF04981.13 gi|452210048|ref|YP_007490162.1| - 0.057 12.9 0.0 0.074 12.5 0.0 1.2 1 0 0 1 1 1 0 NMD3 family Zn-ribbon_8 PF09723.10 gi|452210048|ref|YP_007490162.1| - 0.069 13.3 0.4 0.15 12.2 0.4 1.6 1 0 0 1 1 1 0 Zinc ribbon domain ZF-HD_dimer PF04770.12 gi|452210048|ref|YP_007490162.1| - 0.096 13.0 0.3 0.21 11.9 0.0 1.7 2 0 0 2 2 2 0 ZF-HD protein dimerisation region zf-ribbon_3 PF13248.6 gi|452210048|ref|YP_007490162.1| - 0.25 10.8 1.4 8.8 5.9 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-RanBP PF00641.18 gi|452210048|ref|YP_007490162.1| - 0.43 9.9 0.1 0.43 9.9 0.1 1.7 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others DUF35_N PF12172.8 gi|452210048|ref|YP_007490162.1| - 2.7 8.0 4.4 2.2 8.3 0.4 2.3 1 1 1 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Ribosomal_L16 PF00252.18 gi|452210049|ref|YP_007490163.1| - 1.2e-29 103.0 0.4 1.3e-29 102.9 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e DUF1786 PF08735.10 gi|452210051|ref|YP_007490165.1| - 2.2e-90 302.3 0.0 2.7e-90 302.1 0.0 1.1 1 0 0 1 1 1 1 Putative pyruvate format-lyase activating enzyme (DUF1786) DDR PF08841.10 gi|452210051|ref|YP_007490165.1| - 0.0021 17.1 0.1 0.0045 16.0 0.1 1.5 1 0 0 1 1 1 1 Diol dehydratase reactivase ATPase-like domain MoCF_biosynth PF00994.24 gi|452210052|ref|YP_007490166.1| - 7.5e-34 116.5 0.0 8.7e-34 116.3 0.0 1.0 1 0 0 1 1 1 1 Probable molybdopterin binding domain SNF2_N PF00176.23 gi|452210054|ref|YP_007490168.1| - 2.8e-62 210.5 0.0 3.7e-62 210.1 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain DUF3670 PF12419.8 gi|452210054|ref|YP_007490168.1| - 4.1e-41 140.1 0.4 9.2e-41 138.9 0.4 1.6 1 0 0 1 1 1 1 SNF2 Helicase protein Helicase_C PF00271.31 gi|452210054|ref|YP_007490168.1| - 2.8e-12 46.9 0.0 9e-12 45.3 0.0 1.9 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|452210054|ref|YP_007490168.1| - 7.4e-05 22.8 0.0 0.00013 22.0 0.0 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit FeoA PF04023.14 gi|452210055|ref|YP_007490169.1| - 0.0029 17.8 0.0 0.0031 17.7 0.0 1.1 1 0 0 1 1 1 1 FeoA domain DUF1724 PF08350.10 gi|452210057|ref|YP_007490171.1| - 4.4e-20 71.6 0.0 7.5e-20 70.8 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|452210057|ref|YP_007490171.1| - 0.00062 19.6 0.0 0.001 18.9 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|452210057|ref|YP_007490171.1| - 0.0023 17.8 0.1 0.0046 16.8 0.1 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HemN_C PF06969.16 gi|452210057|ref|YP_007490171.1| - 0.022 14.8 0.4 3.1 7.9 0.0 2.4 2 0 0 2 2 2 0 HemN C-terminal domain CRS1_YhbY PF01985.21 gi|452210059|ref|YP_007490173.1| - 2.7e-21 75.5 1.6 2.9e-21 75.4 1.6 1.0 1 0 0 1 1 1 1 CRS1 / YhbY (CRM) domain CelTOS PF18659.1 gi|452210059|ref|YP_007490173.1| - 0.014 15.8 0.9 0.016 15.6 0.9 1.1 1 0 0 1 1 1 0 Cell-traversal protein for ookinetes and sporozoites tRNA-synt_2c PF01411.19 gi|452210060|ref|YP_007490174.1| - 1.5e-128 429.8 0.0 1.9e-128 429.4 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (A) DHHA1 PF02272.19 gi|452210060|ref|YP_007490174.1| - 5.5e-24 85.2 1.3 5.5e-24 85.2 1.3 1.7 2 0 0 2 2 2 1 DHHA1 domain tRNA_SAD PF07973.14 gi|452210060|ref|YP_007490174.1| - 3.7e-14 52.6 2.2 1e-13 51.1 2.2 1.9 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain Methyltransf_15 PF09445.10 gi|452210061|ref|YP_007490175.1| - 1.8e-12 47.1 0.0 3.1e-12 46.4 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_25 PF13649.6 gi|452210061|ref|YP_007490175.1| - 2.2e-08 34.7 0.0 4.1e-08 33.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|452210061|ref|YP_007490175.1| - 3.6e-08 33.3 0.0 6e-08 32.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|452210061|ref|YP_007490175.1| - 2.5e-07 30.3 0.0 5.2e-07 29.3 0.0 1.4 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_11 PF08241.12 gi|452210061|ref|YP_007490175.1| - 1.7e-06 28.5 0.0 3e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|452210061|ref|YP_007490175.1| - 0.00026 20.9 0.0 0.00062 19.7 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain tRNA_U5-meth_tr PF05958.11 gi|452210061|ref|YP_007490175.1| - 0.00043 19.4 0.0 0.00069 18.7 0.0 1.2 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Met_10 PF02475.16 gi|452210061|ref|YP_007490175.1| - 0.00064 19.5 0.0 0.0011 18.7 0.0 1.4 1 0 0 1 1 1 1 Met-10+ like-protein MTS PF05175.14 gi|452210061|ref|YP_007490175.1| - 0.0015 18.1 0.0 0.0023 17.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Peptidase_A25 PF03418.14 gi|452210061|ref|YP_007490175.1| - 0.018 14.0 0.0 0.032 13.1 0.0 1.3 1 0 0 1 1 1 0 Germination protease Methyltr_RsmB-F PF01189.17 gi|452210061|ref|YP_007490175.1| - 0.025 14.2 0.0 0.041 13.5 0.0 1.3 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F FtsJ PF01728.19 gi|452210061|ref|YP_007490175.1| - 0.032 14.3 0.0 0.072 13.2 0.0 1.5 2 0 0 2 2 2 0 FtsJ-like methyltransferase Cons_hypoth95 PF03602.15 gi|452210061|ref|YP_007490175.1| - 0.057 13.0 0.0 0.089 12.4 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical protein 95 PCMT PF01135.19 gi|452210061|ref|YP_007490175.1| - 0.059 13.1 0.0 0.1 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CmcI PF04989.12 gi|452210061|ref|YP_007490175.1| - 0.083 12.6 0.0 0.13 11.9 0.0 1.2 1 0 0 1 1 1 0 Cephalosporin hydroxylase UPF0020 PF01170.18 gi|452210061|ref|YP_007490175.1| - 0.11 12.2 0.0 0.18 11.5 0.0 1.3 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 Methyltransf_30 PF05430.11 gi|452210061|ref|YP_007490175.1| - 0.12 12.3 0.0 0.8 9.6 0.0 2.0 2 0 0 2 2 2 0 S-adenosyl-L-methionine-dependent methyltransferase Thump_like PF18096.1 gi|452210061|ref|YP_007490175.1| - 0.12 12.3 0.0 0.26 11.2 0.0 1.6 1 0 0 1 1 1 0 THUMP domain-like RrnaAD PF00398.20 gi|452210061|ref|YP_007490175.1| - 0.12 11.4 0.0 0.2 10.7 0.0 1.3 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Iso_dh PF00180.20 gi|452210062|ref|YP_007490176.1| - 6.2e-94 315.0 0.0 7.1e-94 314.8 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Aconitase_C PF00694.19 gi|452210063|ref|YP_007490177.1| - 6.8e-18 65.3 0.0 9.3e-18 64.8 0.0 1.2 1 0 0 1 1 1 1 Aconitase C-terminal domain Aconitase_2_N PF06434.13 gi|452210063|ref|YP_007490177.1| - 0.027 14.1 0.2 0.24 11.0 0.2 2.0 1 1 0 1 1 1 0 Aconitate hydratase 2 N-terminus DUF87 PF01935.17 gi|452210064|ref|YP_007490178.1| - 3.2e-09 37.2 0.0 5.9e-09 36.4 0.0 1.5 1 0 0 1 1 1 1 Helicase HerA, central domain FtsK_SpoIIIE PF01580.18 gi|452210064|ref|YP_007490178.1| - 0.00012 21.5 0.1 0.45 9.8 0.0 2.4 2 0 0 2 2 2 2 FtsK/SpoIIIE family AAA_10 PF12846.7 gi|452210064|ref|YP_007490178.1| - 0.0079 15.2 0.0 2.3 7.0 0.0 2.4 2 1 0 2 2 2 2 AAA-like domain DUF853 PF05872.12 gi|452210064|ref|YP_007490178.1| - 0.0089 14.7 0.0 0.023 13.3 0.0 1.6 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF853) Zot PF05707.12 gi|452210064|ref|YP_007490178.1| - 0.015 14.9 0.0 0.036 13.7 0.0 1.6 1 0 0 1 1 1 0 Zonular occludens toxin (Zot) AAA_22 PF13401.6 gi|452210064|ref|YP_007490178.1| - 0.023 15.0 0.1 6.3 7.1 0.0 2.5 3 0 0 3 3 3 0 AAA domain AAA PF00004.29 gi|452210064|ref|YP_007490178.1| - 0.034 14.6 0.0 0.81 10.1 0.0 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) TFIIE_beta PF02186.15 gi|452210064|ref|YP_007490178.1| - 0.19 12.0 0.0 0.41 11.0 0.0 1.5 1 0 0 1 1 1 0 TFIIE beta subunit core domain Hexapep PF00132.24 gi|452210065|ref|YP_007490179.1| - 1.8 8.4 12.1 18 5.2 12.0 2.2 1 1 0 1 1 1 0 Bacterial transferase hexapeptide (six repeats) DUF1297 PF06973.12 gi|452210066|ref|YP_007490180.1| - 2.5e-56 190.2 0.1 3.4e-56 189.7 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.12 gi|452210066|ref|YP_007490180.1| - 9.1e-45 151.6 0.0 1.9e-44 150.5 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) CPSase_L_D2 PF02786.17 gi|452210066|ref|YP_007490180.1| - 0.0032 17.0 0.0 0.0058 16.2 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_3 PF02655.14 gi|452210066|ref|YP_007490180.1| - 0.0034 17.4 0.0 0.014 15.4 0.0 1.9 1 1 0 1 1 1 1 ATP-grasp domain DUF4895 PF16236.5 gi|452210066|ref|YP_007490180.1| - 0.031 14.1 0.0 0.052 13.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4895) RimK PF08443.11 gi|452210066|ref|YP_007490180.1| - 0.16 11.5 0.0 0.3 10.6 0.0 1.4 1 0 0 1 1 1 0 RimK-like ATP-grasp domain HTH_20 PF12840.7 gi|452210067|ref|YP_007490181.1| - 5.3e-10 39.2 0.0 9.5e-10 38.4 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|452210067|ref|YP_007490181.1| - 1.9e-06 27.3 0.3 3.9e-06 26.3 0.3 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding DUF742 PF05331.11 gi|452210067|ref|YP_007490181.1| - 4.7e-05 23.2 0.0 8.6e-05 22.3 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF742) HTH_5 PF01022.20 gi|452210067|ref|YP_007490181.1| - 0.00011 22.0 0.3 0.00022 21.0 0.3 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|452210067|ref|YP_007490181.1| - 0.00049 19.9 0.4 0.0014 18.4 0.4 1.8 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Dimerisation2 PF16864.5 gi|452210067|ref|YP_007490181.1| - 0.02 14.9 0.0 0.038 14.0 0.0 1.4 1 0 0 1 1 1 0 Dimerisation domain HTH_IclR PF09339.10 gi|452210067|ref|YP_007490181.1| - 0.027 14.3 0.0 0.053 13.3 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|452210067|ref|YP_007490181.1| - 0.034 14.0 0.0 0.063 13.2 0.0 1.4 1 0 0 1 1 1 0 MarR family TFIIE_alpha PF02002.17 gi|452210067|ref|YP_007490181.1| - 0.041 13.7 0.7 0.073 12.9 0.7 1.4 1 0 0 1 1 1 0 TFIIE alpha subunit HTH_45 PF14947.6 gi|452210067|ref|YP_007490181.1| - 0.067 13.2 1.0 0.14 12.2 1.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix HTH_40 PF14493.6 gi|452210067|ref|YP_007490181.1| - 0.095 13.2 0.2 0.24 11.9 0.2 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain PseudoU_synth_1 PF01416.20 gi|452210068|ref|YP_007490182.1| - 9.4e-28 96.8 0.0 1e-21 77.4 0.0 2.2 2 0 0 2 2 2 2 tRNA pseudouridine synthase UPF0020 PF01170.18 gi|452210069|ref|YP_007490183.1| - 1e-28 100.4 0.0 5.3e-28 98.0 0.0 1.9 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 THUMP PF02926.17 gi|452210069|ref|YP_007490183.1| - 1.7e-15 57.4 0.7 6.1e-15 55.6 1.4 1.6 2 0 0 2 2 2 1 THUMP domain Methyltransf_11 PF08241.12 gi|452210069|ref|YP_007490183.1| - 5.7e-09 36.5 0.0 2.4e-08 34.5 0.0 2.1 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|452210069|ref|YP_007490183.1| - 1.2e-08 35.5 0.0 3.6e-08 34.0 0.0 1.9 1 0 0 1 1 1 1 Methyltransferase domain N6_N4_Mtase PF01555.18 gi|452210069|ref|YP_007490183.1| - 1.3e-08 34.8 0.0 0.0019 17.9 0.0 2.2 2 0 0 2 2 2 2 DNA methylase Methyltransf_31 PF13847.6 gi|452210069|ref|YP_007490183.1| - 2e-07 30.9 0.0 3.4e-07 30.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|452210069|ref|YP_007490183.1| - 0.0001 22.0 0.0 0.00016 21.3 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_15 PF09445.10 gi|452210069|ref|YP_007490183.1| - 0.00012 21.7 0.0 0.00025 20.7 0.0 1.5 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase AviRa PF11599.8 gi|452210069|ref|YP_007490183.1| - 0.00018 21.0 0.0 0.037 13.5 0.0 2.2 1 1 1 2 2 2 2 RRNA methyltransferase AviRa MTS PF05175.14 gi|452210069|ref|YP_007490183.1| - 0.0018 17.8 0.0 0.0029 17.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Ubie_methyltran PF01209.18 gi|452210069|ref|YP_007490183.1| - 0.0028 17.0 0.0 0.0067 15.8 0.0 1.5 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family N6_Mtase PF02384.16 gi|452210069|ref|YP_007490183.1| - 0.0093 15.3 0.0 0.019 14.2 0.0 1.5 1 0 0 1 1 1 1 N-6 DNA Methylase Mtf2_C PF14061.6 gi|452210069|ref|YP_007490183.1| - 0.021 15.0 0.0 0.042 14.0 0.0 1.4 1 0 0 1 1 1 0 Polycomb-like MTF2 factor 2 DUF1805 PF08827.11 gi|452210070|ref|YP_007490184.1| - 1.1e-24 86.5 2.5 1.5e-24 86.1 2.5 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1805) IMS PF00817.20 gi|452210070|ref|YP_007490184.1| - 0.059 13.4 0.0 0.07 13.1 0.0 1.1 1 0 0 1 1 1 0 impB/mucB/samB family Peptidase_M24 PF00557.24 gi|452210072|ref|YP_007490186.1| - 9.6e-43 146.3 0.0 1.1e-42 146.1 0.0 1.0 1 0 0 1 1 1 1 Metallopeptidase family M24 Peptidase_M24 PF00557.24 gi|452210073|ref|YP_007490187.1| - 3.7e-45 154.2 0.7 5.3e-45 153.7 0.7 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 DUF2452 PF10504.9 gi|452210073|ref|YP_007490187.1| - 0.057 12.9 0.0 0.12 11.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2452) AdoMet_Synthase PF01941.19 gi|452210075|ref|YP_007490189.1| - 7.9e-180 597.8 0.7 8.9e-180 597.7 0.7 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase (AdoMet synthetase) HisG PF01634.18 gi|452210076|ref|YP_007490190.1| - 2.1e-50 170.8 0.2 3.1e-50 170.3 0.2 1.2 1 0 0 1 1 1 1 ATP phosphoribosyltransferase HisG_C PF08029.11 gi|452210076|ref|YP_007490190.1| - 1.4e-26 92.5 0.3 3.1e-26 91.3 0.3 1.6 1 0 0 1 1 1 1 HisG, C-terminal domain NMT1 PF09084.11 gi|452210076|ref|YP_007490190.1| - 1.2e-06 28.7 0.0 3.9e-05 23.7 0.0 2.4 1 1 0 1 1 1 1 NMT1/THI5 like SBP_bac_3 PF00497.20 gi|452210076|ref|YP_007490190.1| - 0.0031 17.0 0.0 0.007 15.8 0.0 1.4 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Phosphonate-bd PF12974.7 gi|452210076|ref|YP_007490190.1| - 0.056 13.0 0.0 0.1 12.2 0.0 1.5 1 0 0 1 1 1 0 ABC transporter, phosphonate, periplasmic substrate-binding protein DUF111 PF01969.17 gi|452210076|ref|YP_007490190.1| - 0.097 11.8 1.2 6.7 5.7 0.1 2.2 1 1 0 2 2 2 0 Protein of unknown function DUF111 DUF881 PF05949.12 gi|452210076|ref|YP_007490190.1| - 0.14 12.0 0.2 7.9 6.3 0.0 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF881) LysR_substrate PF03466.20 gi|452210076|ref|YP_007490190.1| - 0.18 11.1 0.0 0.28 10.5 0.0 1.3 1 0 0 1 1 1 0 LysR substrate binding domain His_biosynth PF00977.21 gi|452210077|ref|YP_007490191.1| - 1.2e-77 260.4 0.4 1.4e-77 260.2 0.4 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein Dus PF01207.17 gi|452210077|ref|YP_007490191.1| - 6.2e-11 41.9 0.1 6.2e-05 22.2 0.0 2.1 1 1 0 2 2 2 2 Dihydrouridine synthase (Dus) NMO PF03060.15 gi|452210077|ref|YP_007490191.1| - 2.3e-08 33.8 2.3 4.3e-07 29.6 0.4 2.0 1 1 0 2 2 2 1 Nitronate monooxygenase DHO_dh PF01180.21 gi|452210077|ref|YP_007490191.1| - 3.5e-08 33.0 0.4 0.00039 19.7 0.1 2.1 2 0 0 2 2 2 2 Dihydroorotate dehydrogenase NanE PF04131.14 gi|452210077|ref|YP_007490191.1| - 3.1e-07 29.8 0.2 0.021 14.0 0.1 2.2 2 0 0 2 2 2 2 Putative N-acetylmannosamine-6-phosphate epimerase IMPDH PF00478.25 gi|452210077|ref|YP_007490191.1| - 4.3e-06 26.0 0.2 0.019 14.0 0.1 2.1 2 0 0 2 2 2 2 IMP dehydrogenase / GMP reductase domain TMP-TENI PF02581.17 gi|452210077|ref|YP_007490191.1| - 7.3e-06 25.4 1.2 5e-05 22.7 0.1 2.3 2 1 0 2 2 2 1 Thiamine monophosphate synthase ThiG PF05690.14 gi|452210077|ref|YP_007490191.1| - 9.8e-06 25.0 0.5 0.043 13.1 0.2 2.2 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG IGPS PF00218.21 gi|452210077|ref|YP_007490191.1| - 3.5e-05 23.1 0.2 0.0013 18.0 0.0 2.1 2 0 0 2 2 2 1 Indole-3-glycerol phosphate synthase PcrB PF01884.17 gi|452210077|ref|YP_007490191.1| - 0.00012 21.7 0.3 0.014 14.9 0.0 2.1 2 0 0 2 2 2 1 PcrB family G3P_antiterm PF04309.12 gi|452210077|ref|YP_007490191.1| - 0.00019 20.9 1.4 0.0031 17.0 0.1 2.1 2 0 0 2 2 2 1 Glycerol-3-phosphate responsive antiterminator FMN_dh PF01070.18 gi|452210077|ref|YP_007490191.1| - 0.00035 19.7 0.2 0.31 10.0 0.1 2.2 2 0 0 2 2 2 2 FMN-dependent dehydrogenase Trp_syntA PF00290.20 gi|452210077|ref|YP_007490191.1| - 0.00038 19.4 1.5 0.0067 15.3 0.1 2.1 2 0 0 2 2 2 1 Tryptophan synthase alpha chain DUF561 PF04481.12 gi|452210077|ref|YP_007490191.1| - 0.026 13.7 0.2 0.047 12.9 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF561) DNA_pol_lambd_f PF10391.9 gi|452210077|ref|YP_007490191.1| - 0.057 13.3 0.0 26 4.8 0.0 3.2 3 0 0 3 3 3 0 Fingers domain of DNA polymerase lambda Ribul_P_3_epim PF00834.19 gi|452210077|ref|YP_007490191.1| - 0.14 11.5 0.4 3.7 6.9 0.0 2.1 2 0 0 2 2 2 0 Ribulose-phosphate 3 epimerase family IGPD PF00475.18 gi|452210078|ref|YP_007490192.1| - 5e-62 208.5 2.2 6.4e-62 208.1 2.2 1.1 1 0 0 1 1 1 1 Imidazoleglycerol-phosphate dehydratase FdhD-NarQ PF02634.15 gi|452210079|ref|YP_007490193.1| - 4.1e-50 170.7 0.1 6.3e-49 166.8 0.1 2.0 1 1 0 1 1 1 1 FdhD/NarQ family Pilin_N PF07790.11 gi|452210081|ref|YP_007490195.1| - 0.92 10.5 9.0 4.9 8.1 7.5 2.9 2 1 0 2 2 2 0 Archaeal Type IV pilin, N-terminal Pilin_N PF07790.11 gi|452210082|ref|YP_007490196.1| - 1.3e-16 61.3 0.2 3e-16 60.1 0.2 1.7 1 0 0 1 1 1 1 Archaeal Type IV pilin, N-terminal PKD_channel PF08016.12 gi|452210082|ref|YP_007490196.1| - 0.06 12.0 0.4 0.11 11.2 0.4 1.3 1 0 0 1 1 1 0 Polycystin cation channel Pilin_N PF07790.11 gi|452210083|ref|YP_007490197.1| - 1.2e-18 67.8 1.2 1.5e-18 67.5 1.2 1.1 1 0 0 1 1 1 1 Archaeal Type IV pilin, N-terminal PKD_channel PF08016.12 gi|452210083|ref|YP_007490197.1| - 0.19 10.4 1.3 0.25 10.0 1.3 1.1 1 0 0 1 1 1 0 Polycystin cation channel Pilin_N PF07790.11 gi|452210084|ref|YP_007490198.1| - 1e-16 61.6 0.3 1.2e-16 61.4 0.3 1.1 1 0 0 1 1 1 1 Archaeal Type IV pilin, N-terminal PrgU PF09627.10 gi|452210085|ref|YP_007490199.1| - 0.078 13.0 0.2 0.18 11.8 0.2 1.6 1 0 0 1 1 1 0 PrgU-like protein Pilin_N PF07790.11 gi|452210086|ref|YP_007490200.1| - 4.1e-18 66.1 1.4 6.2e-18 65.5 1.4 1.3 1 0 0 1 1 1 1 Archaeal Type IV pilin, N-terminal Pilin_N PF07790.11 gi|452210087|ref|YP_007490201.1| - 5.1e-09 36.9 2.5 5.7e-09 36.8 2.5 1.0 1 0 0 1 1 1 1 Archaeal Type IV pilin, N-terminal T2SSF PF00482.23 gi|452210088|ref|YP_007490202.1| - 3.5e-39 133.6 3.2 1.1e-21 77.1 0.0 4.2 6 0 0 6 6 6 2 Type II secretion system (T2SS), protein F DUF2207 PF09972.9 gi|452210088|ref|YP_007490202.1| - 0.026 13.3 14.6 0.76 8.5 0.8 3.8 3 1 0 3 3 3 0 Predicted membrane protein (DUF2207) 7tm_1 PF00001.21 gi|452210088|ref|YP_007490202.1| - 1.9 7.7 8.8 94 2.2 8.8 3.2 1 1 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) T2SSE PF00437.20 gi|452210089|ref|YP_007490203.1| - 2.3e-44 151.5 0.0 3.5e-44 150.9 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.6 gi|452210089|ref|YP_007490203.1| - 0.025 14.3 0.1 0.062 13.0 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_7 PF12775.7 gi|452210089|ref|YP_007490203.1| - 0.069 12.7 0.0 0.17 11.4 0.0 1.6 1 0 0 1 1 1 0 P-loop containing dynein motor region Aminotran_5 PF00266.19 gi|452210091|ref|YP_007490205.1| - 7.9e-132 439.7 0.0 9e-132 439.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 gi|452210091|ref|YP_007490205.1| - 8.4e-11 41.8 0.0 1.2e-10 41.3 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 gi|452210091|ref|YP_007490205.1| - 8.5e-09 34.4 0.0 1.5e-08 33.6 0.0 1.4 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 gi|452210091|ref|YP_007490205.1| - 8.9e-08 31.7 0.1 3.4e-06 26.5 0.0 2.0 2 0 0 2 2 2 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 gi|452210091|ref|YP_007490205.1| - 8.2e-06 25.3 0.0 1.4e-05 24.5 0.0 1.4 1 1 0 1 1 1 1 Beta-eliminating lyase SHMT PF00464.19 gi|452210091|ref|YP_007490205.1| - 0.0014 17.4 0.0 0.0021 16.7 0.0 1.2 1 0 0 1 1 1 1 Serine hydroxymethyltransferase OKR_DC_1 PF01276.20 gi|452210091|ref|YP_007490205.1| - 0.044 12.5 0.1 0.21 10.3 0.1 2.0 2 1 0 2 2 2 0 Orn/Lys/Arg decarboxylase, major domain S_100 PF01023.19 gi|452210091|ref|YP_007490205.1| - 0.1 12.3 0.0 0.2 11.4 0.0 1.5 1 0 0 1 1 1 0 S-100/ICaBP type calcium binding domain Acetyltransf_1 PF00583.25 gi|452210094|ref|YP_007490208.1| - 3.5e-13 49.8 0.0 4.4e-13 49.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|452210094|ref|YP_007490208.1| - 1.3e-12 48.0 0.0 1.8e-12 47.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|452210094|ref|YP_007490208.1| - 1.5e-10 41.1 0.0 2.4e-10 40.4 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|452210094|ref|YP_007490208.1| - 2.3e-05 24.5 0.0 3.6e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_15 PF17013.5 gi|452210094|ref|YP_007490208.1| - 2.4e-05 23.9 0.0 2.5e-05 23.8 0.0 1.1 1 0 0 1 1 1 1 Putative acetyl-transferase FR47 PF08445.10 gi|452210094|ref|YP_007490208.1| - 8.9e-05 22.4 0.0 0.00015 21.6 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 gi|452210094|ref|YP_007490208.1| - 0.00031 20.8 0.0 0.0021 18.1 0.0 2.1 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_13 PF13880.6 gi|452210094|ref|YP_007490208.1| - 0.011 15.7 0.0 0.019 15.0 0.0 1.3 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase Acetyltransf_4 PF13420.7 gi|452210094|ref|YP_007490208.1| - 0.076 13.1 0.0 0.85 9.7 0.0 2.0 1 1 1 2 2 2 0 Acetyltransferase (GNAT) domain QueC PF06508.13 gi|452210095|ref|YP_007490209.1| - 2.8e-06 27.0 0.0 8.4e-05 22.2 0.0 2.7 1 1 1 2 2 2 1 Queuosine biosynthesis protein QueC NAD_synthase PF02540.17 gi|452210095|ref|YP_007490209.1| - 8e-06 25.1 0.0 1.3e-05 24.5 0.0 1.3 1 0 0 1 1 1 1 NAD synthase Asn_synthase PF00733.21 gi|452210095|ref|YP_007490209.1| - 0.00018 21.3 0.0 0.00024 20.9 0.0 1.3 1 0 0 1 1 1 1 Asparagine synthase ATP_bind_3 PF01171.20 gi|452210095|ref|YP_007490209.1| - 0.00047 20.0 0.0 0.0045 16.8 0.0 2.2 1 1 0 1 1 1 1 PP-loop family ThiI PF02568.14 gi|452210095|ref|YP_007490209.1| - 0.00092 18.8 0.0 0.0027 17.3 0.0 1.7 1 1 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) tRNA_Me_trans PF03054.16 gi|452210095|ref|YP_007490209.1| - 0.022 13.5 0.0 1.6 7.4 0.0 2.4 2 0 0 2 2 2 0 tRNA methyl transferase PAPS_reduct PF01507.19 gi|452210095|ref|YP_007490209.1| - 0.031 14.3 0.0 0.52 10.3 0.0 2.2 2 0 0 2 2 2 0 Phosphoadenosine phosphosulfate reductase family Spore_III_AB PF09548.10 gi|452210095|ref|YP_007490209.1| - 0.28 11.3 2.3 3.8 7.6 1.3 2.8 1 1 1 2 2 2 0 Stage III sporulation protein AB (spore_III_AB) PGM_PMM_I PF02878.16 gi|452210096|ref|YP_007490210.1| - 2.6e-38 130.8 0.1 6.8e-38 129.5 0.1 1.7 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|452210096|ref|YP_007490210.1| - 1.4e-27 96.3 0.0 2.4e-27 95.5 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.16 gi|452210096|ref|YP_007490210.1| - 1.3e-26 93.1 0.1 2.5e-26 92.1 0.1 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.20 gi|452210096|ref|YP_007490210.1| - 9.2e-12 45.0 0.1 3.6e-11 43.1 0.0 2.0 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain GCR PF02155.15 gi|452210096|ref|YP_007490210.1| - 0.23 10.5 0.1 0.9 8.5 0.0 1.7 1 1 1 2 2 2 0 Glucocorticoid receptor Methyltransf_29 PF03141.16 gi|452210096|ref|YP_007490210.1| - 0.25 9.9 0.0 0.37 9.3 0.0 1.2 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Radical_SAM PF04055.21 gi|452210097|ref|YP_007490211.1| - 1.1e-25 90.9 0.1 6e-24 85.3 0.0 2.3 2 0 0 2 2 2 2 Radical SAM superfamily B12-binding PF02310.19 gi|452210097|ref|YP_007490211.1| - 5.8e-11 42.5 0.0 2.5e-10 40.4 0.0 2.0 2 0 0 2 2 2 1 B12 binding domain Peptidase_M50 PF02163.22 gi|452210098|ref|YP_007490212.1| - 2.2e-12 46.8 10.0 4.1e-08 32.8 0.4 2.4 1 1 1 2 2 2 2 Peptidase family M50 DUF126 PF01989.16 gi|452210099|ref|YP_007490213.1| - 9.8e-36 121.4 0.4 1.6e-35 120.7 0.4 1.3 1 0 0 1 1 1 1 Aconitase X swivel domain DUF521 PF04412.13 gi|452210100|ref|YP_007490214.1| - 5.6e-156 519.3 0.2 6.3e-156 519.1 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF521) zinc_ribbon_4 PF13717.6 gi|452210100|ref|YP_007490214.1| - 2.4 8.1 5.8 93 3.1 0.4 3.6 4 0 0 4 4 4 0 zinc-ribbon domain UbiD PF01977.16 gi|452210101|ref|YP_007490215.1| - 1e-115 386.9 0.8 1.2e-115 386.7 0.8 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Gln-synt_N_2 PF16952.5 gi|452210101|ref|YP_007490215.1| - 0.12 12.3 0.0 0.24 11.3 0.0 1.5 1 0 0 1 1 1 0 Glutamine synthetase N-terminal domain Citrate_synt PF00285.21 gi|452210102|ref|YP_007490216.1| - 1.8e-116 389.2 0.0 2e-116 389.0 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain Aconitase PF00330.20 gi|452210103|ref|YP_007490217.1| - 1.1e-178 595.0 0.0 1.4e-178 594.6 0.0 1.1 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_C PF00694.19 gi|452210103|ref|YP_007490217.1| - 3.1e-39 134.3 0.0 7.9e-39 133.0 0.0 1.7 1 0 0 1 1 1 1 Aconitase C-terminal domain DUF5069 PF16798.5 gi|452210106|ref|YP_007490220.1| - 0.0055 16.9 0.0 0.013 15.7 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF5069) DUF496 PF04363.12 gi|452210106|ref|YP_007490220.1| - 0.02 14.9 0.0 0.043 13.9 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF496) Phage_int_SAM_5 PF13102.6 gi|452210106|ref|YP_007490220.1| - 0.079 13.3 0.0 0.15 12.4 0.0 1.6 1 0 0 1 1 1 0 Phage integrase SAM-like domain Arg_decarb_HB PF17810.1 gi|452210106|ref|YP_007490220.1| - 0.14 12.4 0.1 0.26 11.6 0.1 1.4 1 0 0 1 1 1 0 Arginine decarboxylase helical bundle domain VWA_2 PF13519.6 gi|452210107|ref|YP_007490221.1| - 1.5e-12 48.1 0.1 5.2e-12 46.4 0.0 1.9 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA PF00092.28 gi|452210107|ref|YP_007490221.1| - 6.4e-09 36.3 0.3 1.9e-08 34.8 0.1 1.9 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 gi|452210107|ref|YP_007490221.1| - 9.7e-08 31.7 0.0 1.6e-07 30.9 0.0 1.2 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein VWA_3 PF13768.6 gi|452210107|ref|YP_007490221.1| - 3.2e-07 30.4 0.0 6.3e-07 29.4 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain DUF2201 PF09967.9 gi|452210107|ref|YP_007490221.1| - 0.011 15.9 0.0 0.024 14.8 0.0 1.6 1 0 0 1 1 1 0 VWA-like domain (DUF2201) CobT_C PF11775.8 gi|452210107|ref|YP_007490221.1| - 0.032 13.9 0.0 0.28 10.8 0.0 2.2 2 0 0 2 2 2 0 Cobalamin biosynthesis protein CobT VWA domain ALMT PF11744.8 gi|452210107|ref|YP_007490221.1| - 1.4 7.6 4.0 2 7.1 4.0 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter ThiF PF00899.21 gi|452210110|ref|YP_007490224.1| - 8.3e-61 205.4 0.0 1.8e-57 194.5 0.0 2.0 1 1 0 1 1 1 1 ThiF family Shikimate_DH PF01488.20 gi|452210110|ref|YP_007490224.1| - 0.061 13.4 0.1 0.39 10.8 0.0 2.0 1 1 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase Aldolase_II PF00596.21 gi|452210112|ref|YP_007490226.1| - 2.7e-34 118.7 0.1 3.1e-34 118.5 0.1 1.0 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain CDP-OH_P_transf PF01066.21 gi|452210114|ref|YP_007490228.1| - 8.1e-13 48.9 0.5 8.1e-13 48.9 0.5 2.7 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase Archease PF01951.16 gi|452210115|ref|YP_007490229.1| - 2.1e-48 164.1 1.0 2.3e-48 163.9 1.0 1.0 1 0 0 1 1 1 1 Archease protein family (MTH1598/TM1083) RtcB PF01139.17 gi|452210116|ref|YP_007490230.1| - 6.5e-172 572.4 0.4 7.4e-172 572.2 0.4 1.0 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB MtrH PF02007.18 gi|452210119|ref|YP_007490233.1| - 1.3e-148 494.1 0.5 1.4e-148 493.9 0.5 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase MtrH subunit MtrG PF04210.13 gi|452210120|ref|YP_007490234.1| - 1.9e-31 107.7 0.8 2.1e-31 107.5 0.8 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit G TIM PF00121.18 gi|452210120|ref|YP_007490234.1| - 0.0031 16.9 0.0 0.0037 16.7 0.0 1.0 1 0 0 1 1 1 1 Triosephosphate isomerase MtrF PF09472.10 gi|452210121|ref|YP_007490235.1| - 7.1e-30 102.2 1.7 7.9e-30 102.1 1.7 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) MtrA PF04208.14 gi|452210122|ref|YP_007490236.1| - 1.6e-84 281.8 0.3 2.1e-84 281.4 0.3 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit A MtrF PF09472.10 gi|452210122|ref|YP_007490236.1| - 0.0095 15.3 0.3 0.024 14.0 0.3 1.7 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) MtrB PF05440.12 gi|452210123|ref|YP_007490237.1| - 1.8e-37 127.6 0.0 2.1e-37 127.4 0.0 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase subunit B MtrC PF04211.13 gi|452210124|ref|YP_007490238.1| - 4.2e-109 363.8 30.8 4.8e-109 363.6 30.8 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit C ACT_7 PF13840.6 gi|452210124|ref|YP_007490238.1| - 0.82 9.5 3.4 1.6 8.6 0.1 2.6 2 0 0 2 2 2 0 ACT domain MtrD PF04207.12 gi|452210125|ref|YP_007490239.1| - 1.6e-101 338.6 27.7 1.9e-101 338.3 27.7 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit D MtrE PF04206.12 gi|452210126|ref|YP_007490240.1| - 5.5e-110 366.9 12.2 6.2e-110 366.8 12.2 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit E SSF PF00474.17 gi|452210127|ref|YP_007490241.1| - 8.2e-36 123.7 30.8 1.9e-35 122.6 30.1 1.8 2 0 0 2 2 2 1 Sodium:solute symporter family Nramp PF01566.18 gi|452210127|ref|YP_007490241.1| - 0.28 10.1 31.9 0.0077 15.2 12.0 2.9 3 1 0 3 3 3 0 Natural resistance-associated macrophage protein TOBE PF03459.17 gi|452210128|ref|YP_007490242.1| - 2.9e-17 62.7 0.8 3.5e-17 62.4 0.2 1.4 2 0 0 2 2 2 1 TOBE domain TOBE_2 PF08402.10 gi|452210128|ref|YP_007490242.1| - 0.0023 18.1 0.0 0.0042 17.2 0.0 1.4 1 0 0 1 1 1 1 TOBE domain Rad9_Rad53_bind PF08605.10 gi|452210128|ref|YP_007490242.1| - 0.014 15.5 0.1 0.018 15.2 0.1 1.3 1 0 0 1 1 1 0 Fungal Rad9-like Rad53-binding ENT PF03735.14 gi|452210128|ref|YP_007490242.1| - 0.11 12.6 0.0 0.26 11.4 0.0 1.6 1 0 0 1 1 1 0 ENT domain TrmB PF01978.19 gi|452210129|ref|YP_007490243.1| - 4.8e-24 84.0 0.1 7.8e-24 83.4 0.1 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Regulator_TrmB PF11495.8 gi|452210129|ref|YP_007490243.1| - 2.1e-05 23.8 0.0 3.1e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB HTH_IclR PF09339.10 gi|452210129|ref|YP_007490243.1| - 0.00018 21.2 0.1 0.0023 17.7 0.0 2.3 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_20 PF12840.7 gi|452210129|ref|YP_007490243.1| - 0.0097 16.0 0.0 0.023 14.7 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain Rrf2 PF02082.20 gi|452210129|ref|YP_007490243.1| - 0.011 16.1 0.0 0.021 15.2 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator HTH_27 PF13463.6 gi|452210129|ref|YP_007490243.1| - 0.028 14.9 0.2 0.15 12.6 0.0 2.2 2 1 1 3 3 3 0 Winged helix DNA-binding domain HTH_34 PF13601.6 gi|452210129|ref|YP_007490243.1| - 0.037 14.2 0.0 0.15 12.3 0.0 1.9 2 0 0 2 2 2 0 Winged helix DNA-binding domain Penicillinase_R PF03965.16 gi|452210129|ref|YP_007490243.1| - 0.068 13.5 0.0 0.12 12.8 0.0 1.4 1 0 0 1 1 1 0 Penicillinase repressor PadR PF03551.14 gi|452210129|ref|YP_007490243.1| - 0.071 13.1 0.0 0.24 11.4 0.0 1.9 1 1 1 2 2 2 0 Transcriptional regulator PadR-like family Helicase_C_2 PF13307.6 gi|452210129|ref|YP_007490243.1| - 0.085 13.0 0.1 0.12 12.5 0.1 1.2 1 0 0 1 1 1 0 Helicase C-terminal domain HTH_9 PF08221.11 gi|452210129|ref|YP_007490243.1| - 0.098 12.8 0.0 0.18 11.9 0.0 1.4 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain MarR_2 PF12802.7 gi|452210129|ref|YP_007490243.1| - 0.1 12.5 0.1 0.42 10.5 0.1 1.9 1 1 1 2 2 2 0 MarR family HTH_5 PF01022.20 gi|452210129|ref|YP_007490243.1| - 0.13 12.2 0.0 0.31 10.9 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family GntR PF00392.21 gi|452210129|ref|YP_007490243.1| - 0.13 11.9 0.1 0.67 9.6 0.0 2.2 3 0 0 3 3 3 0 Bacterial regulatory proteins, gntR family Lactamase_B_3 PF13483.6 gi|452210130|ref|YP_007490244.1| - 1.3e-36 125.9 0.0 1.6e-36 125.6 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|452210130|ref|YP_007490244.1| - 1.8e-14 53.7 0.0 2.8e-14 53.1 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|452210130|ref|YP_007490244.1| - 0.0016 18.5 0.6 0.22 11.5 0.2 2.3 2 0 0 2 2 2 2 Metallo-beta-lactamase superfamily Rpr2 PF04032.16 gi|452210131|ref|YP_007490245.1| - 5.3e-16 58.7 0.1 8.3e-16 58.1 0.1 1.3 1 0 0 1 1 1 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain DUF4674 PF15719.5 gi|452210131|ref|YP_007490245.1| - 4.2e-05 23.7 1.3 0.052 13.6 0.1 2.4 1 1 1 2 2 2 2 Domain of unknown function (DUF4674) DZR PF12773.7 gi|452210131|ref|YP_007490245.1| - 0.041 13.9 0.2 0.07 13.2 0.2 1.4 1 0 0 1 1 1 0 Double zinc ribbon TraT PF05818.12 gi|452210131|ref|YP_007490245.1| - 0.11 12.2 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 Enterobacterial TraT complement resistance protein CpXC PF14353.6 gi|452210131|ref|YP_007490245.1| - 0.17 12.0 0.9 0.66 10.0 0.1 2.0 1 1 1 2 2 2 0 CpXC protein zinc_ribbon_6 PF14599.6 gi|452210131|ref|YP_007490245.1| - 0.27 11.3 2.6 7.2 6.7 0.0 2.8 2 1 0 2 2 2 0 Zinc-ribbon ADD_ATRX PF17981.1 gi|452210131|ref|YP_007490245.1| - 0.49 10.3 3.5 3.6 7.5 0.6 2.4 1 1 1 2 2 2 0 Cysteine Rich ADD domain SRP19 PF01922.17 gi|452210132|ref|YP_007490246.1| - 1.4e-22 80.4 0.1 1.9e-22 80.0 0.1 1.2 1 0 0 1 1 1 1 SRP19 protein Pilin_N PF07790.11 gi|452210135|ref|YP_007490249.1| - 7.8e-12 46.0 0.2 2.6e-11 44.3 0.0 1.9 2 0 0 2 2 2 1 Archaeal Type IV pilin, N-terminal Arch_flagellin PF01917.16 gi|452210135|ref|YP_007490249.1| - 0.77 9.9 8.4 0.31 11.2 1.1 2.2 2 1 0 2 2 2 0 Archaebacterial flagellin PBP_like_2 PF12849.7 gi|452210137|ref|YP_007490251.1| - 3.5e-29 102.4 0.7 4.7e-29 101.9 0.7 1.1 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_11 PF13531.6 gi|452210137|ref|YP_007490251.1| - 9.7e-13 48.4 0.0 4.3e-12 46.3 0.0 1.8 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|452210137|ref|YP_007490251.1| - 0.0012 18.8 0.1 0.87 9.5 0.0 2.2 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein BPD_transp_1 PF00528.22 gi|452210139|ref|YP_007490253.1| - 1.4e-14 54.3 19.6 1.5e-14 54.1 19.6 1.0 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|452210140|ref|YP_007490254.1| - 4e-33 114.8 0.0 9.2e-33 113.7 0.0 1.6 1 0 0 1 1 1 1 ABC transporter TOBE PF03459.17 gi|452210140|ref|YP_007490254.1| - 6.9e-12 45.5 0.0 1.7e-11 44.3 0.0 1.7 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.6 gi|452210140|ref|YP_007490254.1| - 3.1e-11 43.6 0.4 6.1e-06 26.2 0.1 2.3 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system TOBE_2 PF08402.10 gi|452210140|ref|YP_007490254.1| - 6.1e-09 35.9 0.0 1.3e-08 34.9 0.0 1.6 1 0 0 1 1 1 1 TOBE domain AAA_15 PF13175.6 gi|452210140|ref|YP_007490254.1| - 9.8e-09 35.4 4.0 1.8e-05 24.6 0.1 2.5 3 0 0 3 3 3 2 AAA ATPase domain AAA_22 PF13401.6 gi|452210140|ref|YP_007490254.1| - 3e-06 27.5 0.2 3.5e-05 24.1 0.2 2.1 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|452210140|ref|YP_007490254.1| - 2.3e-05 24.0 2.0 0.00096 18.6 0.3 2.9 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|452210140|ref|YP_007490254.1| - 0.026 14.9 0.0 0.048 14.0 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain AAA_29 PF13555.6 gi|452210140|ref|YP_007490254.1| - 0.026 14.2 0.0 0.05 13.3 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_7 PF12775.7 gi|452210140|ref|YP_007490254.1| - 0.036 13.6 0.0 0.064 12.8 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_23 PF13476.6 gi|452210140|ref|YP_007490254.1| - 0.059 13.9 3.4 0.049 14.1 0.7 2.3 2 1 0 2 2 2 0 AAA domain ResIII PF04851.15 gi|452210140|ref|YP_007490254.1| - 0.073 13.1 0.2 0.26 11.3 0.0 1.9 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit CheB_methylest PF01339.17 gi|452210140|ref|YP_007490254.1| - 0.078 12.7 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 CheB methylesterase DEAD PF00270.29 gi|452210140|ref|YP_007490254.1| - 0.097 12.4 0.0 0.18 11.6 0.0 1.4 1 0 0 1 1 1 0 DEAD/DEAH box helicase SbcCD_C PF13558.6 gi|452210140|ref|YP_007490254.1| - 0.12 12.7 0.0 1.4 9.2 0.0 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_30 PF13604.6 gi|452210140|ref|YP_007490254.1| - 0.15 11.7 0.1 0.31 10.7 0.1 1.7 1 1 0 1 1 1 0 AAA domain Fer4 PF00037.27 gi|452210141|ref|YP_007490255.1| - 5.6e-52 171.6 84.0 2.3e-08 33.5 1.7 8.2 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_7 PF12838.7 gi|452210141|ref|YP_007490255.1| - 1.4e-40 137.7 109.2 7.3e-10 39.3 12.5 5.7 3 2 4 7 7 7 7 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|452210141|ref|YP_007490255.1| - 1.1e-32 110.7 82.8 2.1e-06 27.5 3.2 8.2 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_16 PF13484.6 gi|452210141|ref|YP_007490255.1| - 1.2e-32 112.7 54.2 3.3e-10 40.8 5.9 7.2 7 0 0 7 7 7 7 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|452210141|ref|YP_007490255.1| - 5.4e-31 106.5 61.3 4.1e-09 36.4 5.4 6.3 5 1 2 7 7 7 7 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452210141|ref|YP_007490255.1| - 8.4e-31 105.9 55.2 4.4e-10 39.6 6.3 5.9 5 2 1 6 6 6 6 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|452210141|ref|YP_007490255.1| - 9.9e-30 102.4 63.1 4.8e-09 36.2 9.4 6.6 4 2 3 7 7 7 7 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452210141|ref|YP_007490255.1| - 1.3e-20 72.1 79.7 1e-05 25.3 2.3 8.3 8 0 0 8 8 8 7 4Fe-4S binding domain Fer4_8 PF13183.6 gi|452210141|ref|YP_007490255.1| - 4.6e-20 71.8 50.5 3.2e-08 33.9 3.1 6.0 5 1 0 5 5 5 4 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|452210141|ref|YP_007490255.1| - 2e-19 69.9 50.5 2.4e-05 24.8 9.5 5.9 5 1 0 5 5 5 5 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|452210141|ref|YP_007490255.1| - 3.8e-16 58.2 74.7 0.00044 20.5 2.3 8.3 8 0 0 8 8 8 6 4Fe-4S binding domain Fer4_3 PF12798.7 gi|452210141|ref|YP_007490255.1| - 2.1e-12 47.0 102.6 0.0017 19.2 5.8 8.3 8 0 0 8 8 8 7 4Fe-4S binding domain Fer4_18 PF13746.6 gi|452210141|ref|YP_007490255.1| - 1.6e-08 34.7 58.2 0.036 14.2 1.1 7.7 4 1 4 8 8 8 5 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|452210141|ref|YP_007490255.1| - 3.6e-05 24.5 68.1 0.064 14.1 1.0 8.1 5 2 3 9 9 9 4 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|452210141|ref|YP_007490255.1| - 0.0015 19.1 79.4 0.054 14.0 2.8 8.2 7 1 0 7 7 7 3 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|452210141|ref|YP_007490255.1| - 0.011 16.5 5.4 0.1 13.3 0.5 9.0 7 3 1 8 8 7 0 4Fe-4S single cluster domain ETF_QO PF05187.13 gi|452210141|ref|YP_007490255.1| - 3.6 7.8 37.7 4.6 7.4 1.6 5.8 3 2 3 6 6 6 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Amidohydro_3 PF07969.11 gi|452210142|ref|YP_007490256.1| - 3.7e-102 343.2 0.2 4.3e-102 343.0 0.2 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_1 PF01979.20 gi|452210142|ref|YP_007490256.1| - 8.4e-07 28.6 0.1 0.0033 16.8 0.0 2.6 2 1 0 2 2 2 2 Amidohydrolase family DUF1996 PF09362.10 gi|452210142|ref|YP_007490256.1| - 0.11 12.5 0.3 0.96 9.4 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1996) GXGXG PF01493.19 gi|452210143|ref|YP_007490257.1| - 1.3e-07 31.4 22.2 4.5e-07 29.7 20.8 2.4 1 1 0 1 1 1 1 GXGXG motif Molydop_binding PF01568.21 gi|452210144|ref|YP_007490258.1| - 4.6e-11 42.7 0.0 6.3e-11 42.3 0.0 1.2 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdopterin PF00384.22 gi|452210145|ref|YP_007490259.1| - 1.8e-15 56.9 0.0 6.6e-15 55.0 0.0 1.8 1 1 0 1 1 1 1 Molybdopterin oxidoreductase TPP_enzyme_M PF00205.22 gi|452210145|ref|YP_007490259.1| - 0.097 12.4 0.0 0.24 11.1 0.0 1.7 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, central domain Cyt-b5 PF00173.28 gi|452210146|ref|YP_007490260.1| - 5.7e-10 39.2 0.1 8.7e-10 38.6 0.1 1.3 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain DUF4969 PF16339.5 gi|452210146|ref|YP_007490260.1| - 0.15 12.4 0.2 0.89 9.9 0.1 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4969) OAD_gamma PF04277.13 gi|452210146|ref|YP_007490260.1| - 0.19 12.3 0.0 0.31 11.7 0.0 1.2 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain SIMPL PF04402.14 gi|452210148|ref|YP_007490262.1| - 3.3e-48 164.8 11.2 3.9e-48 164.6 11.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF541) YbaB_DNA_bd PF02575.16 gi|452210148|ref|YP_007490262.1| - 0.11 12.8 5.1 0.065 13.5 1.0 2.6 2 1 0 2 2 2 0 YbaB/EbfC DNA-binding family DUF4448 PF14610.6 gi|452210148|ref|YP_007490262.1| - 0.36 10.6 3.4 0.5 10.1 0.1 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF4448) Amnionless PF14828.6 gi|452210148|ref|YP_007490262.1| - 6.3 5.5 5.5 1.4 7.7 1.1 1.9 1 1 1 2 2 2 0 Amnionless Acetyltransf_9 PF13527.7 gi|452210149|ref|YP_007490263.1| - 0.0028 17.7 0.0 0.0095 16.0 0.0 1.7 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain DUF4301 PF14134.6 gi|452210149|ref|YP_007490263.1| - 0.056 12.3 0.0 0.061 12.1 0.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4301) Methyltransf_25 PF13649.6 gi|452210151|ref|YP_007490265.1| - 6.6e-14 52.4 0.0 8.8e-14 52.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|452210151|ref|YP_007490265.1| - 7.9e-12 45.0 0.0 1e-11 44.6 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_12 PF08242.12 gi|452210151|ref|YP_007490265.1| - 8e-12 45.8 0.0 1.1e-11 45.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|452210151|ref|YP_007490265.1| - 3.5e-11 43.1 0.0 4e-11 42.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|452210151|ref|YP_007490265.1| - 1.2e-10 41.9 0.0 1.6e-10 41.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|452210151|ref|YP_007490265.1| - 1.7e-08 34.4 0.0 2e-08 34.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|452210151|ref|YP_007490265.1| - 7.1e-06 25.9 0.0 9.2e-06 25.5 0.0 1.1 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Ubie_methyltran PF01209.18 gi|452210151|ref|YP_007490265.1| - 0.0001 21.8 0.0 0.00018 20.9 0.0 1.3 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_4 PF02390.17 gi|452210151|ref|YP_007490265.1| - 0.00066 19.2 0.0 0.001 18.5 0.0 1.2 1 0 0 1 1 1 1 Putative methyltransferase MTS PF05175.14 gi|452210151|ref|YP_007490265.1| - 0.0019 17.8 0.0 0.0048 16.5 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_18 PF12847.7 gi|452210151|ref|YP_007490265.1| - 0.0077 16.2 0.0 0.011 15.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain NodS PF05401.11 gi|452210151|ref|YP_007490265.1| - 0.011 15.3 0.0 0.016 14.8 0.0 1.1 1 0 0 1 1 1 0 Nodulation protein S (NodS) HMW1C_N PF18071.1 gi|452210151|ref|YP_007490265.1| - 0.012 15.5 0.0 0.016 15.0 0.0 1.2 1 0 0 1 1 1 0 HMW1C N-terminal Methyltransf_15 PF09445.10 gi|452210151|ref|YP_007490265.1| - 0.056 13.0 0.0 0.069 12.7 0.0 1.2 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase PrmA PF06325.13 gi|452210151|ref|YP_007490265.1| - 0.067 12.6 0.0 0.073 12.4 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) DUF364 PF04016.12 gi|452210154|ref|YP_007490268.1| - 3.1e-42 143.6 0.0 4.4e-42 143.1 0.0 1.2 1 0 0 1 1 1 1 Putative heavy-metal chelation DUF4213 PF13938.6 gi|452210154|ref|YP_007490268.1| - 4.6e-19 68.4 0.0 7.3e-19 67.8 0.0 1.3 1 0 0 1 1 1 1 Putative heavy-metal chelation QRPTase_C PF01729.19 gi|452210155|ref|YP_007490269.1| - 8.8e-27 93.9 0.0 1.5e-26 93.2 0.0 1.3 1 1 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.16 gi|452210155|ref|YP_007490269.1| - 5.6e-13 48.8 0.0 1.1e-12 47.8 0.0 1.5 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain ABC_tran PF00005.27 gi|452210156|ref|YP_007490270.1| - 3e-31 108.8 0.0 4.9e-31 108.1 0.0 1.4 1 0 0 1 1 1 1 ABC transporter TOBE PF03459.17 gi|452210156|ref|YP_007490270.1| - 3.2e-16 59.4 0.2 2.3e-14 53.4 0.1 3.0 2 1 0 2 2 2 1 TOBE domain AAA_21 PF13304.6 gi|452210156|ref|YP_007490270.1| - 6.6e-08 32.7 0.2 0.0073 16.2 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|452210156|ref|YP_007490270.1| - 6.4e-06 25.8 0.1 0.00021 20.8 0.1 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 gi|452210156|ref|YP_007490270.1| - 0.0002 21.5 0.2 0.0053 17.0 0.2 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_22 PF13401.6 gi|452210156|ref|YP_007490270.1| - 0.0012 19.1 0.0 0.0031 17.8 0.0 1.7 1 1 0 1 1 1 1 AAA domain TOBE_2 PF08402.10 gi|452210156|ref|YP_007490270.1| - 0.0078 16.4 0.1 0.022 14.9 0.1 1.8 1 1 0 1 1 1 1 TOBE domain AAA_16 PF13191.6 gi|452210156|ref|YP_007490270.1| - 0.014 15.8 0.0 0.024 15.0 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain T2SSE PF00437.20 gi|452210156|ref|YP_007490270.1| - 0.029 13.4 0.0 0.065 12.3 0.0 1.6 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_29 PF13555.6 gi|452210156|ref|YP_007490270.1| - 0.035 13.9 0.1 0.071 12.9 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain Mg_chelatase PF01078.21 gi|452210156|ref|YP_007490270.1| - 0.095 12.1 0.0 0.33 10.3 0.0 1.8 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 gi|452210156|ref|YP_007490270.1| - 0.11 12.2 0.1 4.8 6.9 0.0 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein NACHT PF05729.12 gi|452210156|ref|YP_007490270.1| - 0.13 12.1 0.3 1.3 8.9 0.0 2.1 2 0 0 2 2 2 0 NACHT domain BPD_transp_1 PF00528.22 gi|452210157|ref|YP_007490271.1| - 1.8e-17 63.7 13.2 1.8e-17 63.7 13.2 1.5 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component SBP_bac_11 PF13531.6 gi|452210158|ref|YP_007490272.1| - 1.4e-43 149.3 0.0 1.6e-43 149.1 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_3 PF00497.20 gi|452210158|ref|YP_007490272.1| - 0.00017 21.1 0.0 0.00033 20.1 0.0 1.4 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Phosphonate-bd PF12974.7 gi|452210158|ref|YP_007490272.1| - 0.0016 18.1 0.0 0.0045 16.6 0.0 1.7 1 1 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein SBP_bac_8 PF13416.6 gi|452210158|ref|YP_007490272.1| - 0.045 13.6 0.5 1.1 9.0 0.2 2.1 2 0 0 2 2 2 0 Bacterial extracellular solute-binding protein YhfZ_C PF14503.6 gi|452210158|ref|YP_007490272.1| - 0.049 13.2 0.4 0.071 12.7 0.4 1.2 1 0 0 1 1 1 0 YhfZ C-terminal domain Flavodoxin_2 PF02525.17 gi|452210159|ref|YP_007490273.1| - 1.4e-55 188.1 0.1 1.8e-55 187.8 0.1 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold FMN_red PF03358.15 gi|452210159|ref|YP_007490273.1| - 1.7e-15 57.1 0.0 3.6e-14 52.8 0.0 2.3 1 1 0 1 1 1 1 NADPH-dependent FMN reductase Pox_A_type_inc PF04508.12 gi|452210159|ref|YP_007490273.1| - 0.27 11.2 1.2 0.54 10.2 1.2 1.5 1 0 0 1 1 1 0 Viral A-type inclusion protein repeat FMN_red PF03358.15 gi|452210160|ref|YP_007490274.1| - 2.1e-32 112.0 0.0 2.7e-32 111.6 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|452210160|ref|YP_007490274.1| - 9.4e-10 38.5 0.0 1.1e-09 38.3 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold DUF2284 PF10050.9 gi|452210160|ref|YP_007490274.1| - 0.012 15.4 0.2 0.018 14.8 0.2 1.2 1 0 0 1 1 1 0 Predicted metal-binding protein (DUF2284) Rossmann-like PF10727.9 gi|452210160|ref|YP_007490274.1| - 0.098 12.5 0.0 0.18 11.7 0.0 1.5 1 1 0 1 1 1 0 Rossmann-like domain Rep_1B PF17873.1 gi|452210160|ref|YP_007490274.1| - 0.2 11.5 1.6 2.5 8.0 0.1 2.3 2 0 0 2 2 2 0 Replicase polyprotein 1ab ABM PF03992.16 gi|452210161|ref|YP_007490275.1| - 5.7e-13 48.8 0.0 7.6e-13 48.4 0.0 1.1 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase Nitroreductase PF00881.24 gi|452210162|ref|YP_007490276.1| - 2.2e-31 109.2 0.4 1.2e-16 61.3 0.2 2.1 1 1 1 2 2 2 2 Nitroreductase family TM1586_NiRdase PF14512.6 gi|452210162|ref|YP_007490276.1| - 1e-13 51.4 0.1 1.9e-05 24.4 0.1 3.1 1 1 2 3 3 3 3 Putative TM nitroreductase FMN_red PF03358.15 gi|452210163|ref|YP_007490277.1| - 2.6e-25 89.0 0.0 3e-25 88.8 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|452210163|ref|YP_007490277.1| - 1.1e-13 51.3 0.0 1.3e-13 51.1 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.7 gi|452210163|ref|YP_007490277.1| - 0.0042 17.3 0.0 0.0067 16.7 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain HxlR PF01638.17 gi|452210165|ref|YP_007490279.1| - 5.3e-21 74.3 0.0 6.3e-21 74.0 0.0 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix PadR PF03551.14 gi|452210165|ref|YP_007490279.1| - 0.0082 16.1 0.0 0.012 15.6 0.0 1.2 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family MarR PF01047.22 gi|452210165|ref|YP_007490279.1| - 0.063 13.2 0.0 0.1 12.6 0.0 1.4 1 0 0 1 1 1 0 MarR family DUF505 PF04458.12 gi|452210165|ref|YP_007490279.1| - 0.17 10.2 0.0 0.18 10.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF505) Helicase_C_2 PF13307.6 gi|452210166|ref|YP_007490280.1| - 8.3e-29 100.9 0.0 1.9e-28 99.7 0.0 1.6 1 0 0 1 1 1 1 Helicase C-terminal domain DEAD_2 PF06733.15 gi|452210166|ref|YP_007490280.1| - 2.4e-15 56.6 1.8 1.6e-14 53.9 1.8 2.0 1 1 0 1 1 1 1 DEAD_2 ResIII PF04851.15 gi|452210166|ref|YP_007490280.1| - 6.9e-08 32.7 1.5 4.5e-06 26.8 1.5 2.3 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit PhoH PF02562.16 gi|452210166|ref|YP_007490280.1| - 8.6e-05 22.1 0.1 0.00033 20.2 0.0 1.9 2 0 0 2 2 2 1 PhoH-like protein DEAD PF00270.29 gi|452210166|ref|YP_007490280.1| - 0.00018 21.3 0.1 0.0049 16.7 0.0 2.6 3 0 0 3 3 3 1 DEAD/DEAH box helicase Zot PF05707.12 gi|452210166|ref|YP_007490280.1| - 0.00024 20.8 0.1 0.41 10.2 0.0 2.4 2 0 0 2 2 2 2 Zonular occludens toxin (Zot) HBB PF06777.11 gi|452210166|ref|YP_007490280.1| - 0.00071 19.3 0.5 0.004 16.9 0.0 2.2 2 0 0 2 2 2 1 Helical and beta-bridge domain DUF2075 PF09848.9 gi|452210166|ref|YP_007490280.1| - 0.021 14.1 0.0 1.1 8.4 0.0 2.3 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) ATPase PF06745.13 gi|452210166|ref|YP_007490280.1| - 0.03 13.7 0.0 0.056 12.8 0.0 1.3 1 0 0 1 1 1 0 KaiC Sigma54_activat PF00158.26 gi|452210166|ref|YP_007490280.1| - 0.039 13.6 0.1 0.12 12.1 0.1 1.7 2 0 0 2 2 2 0 Sigma-54 interaction domain HTH_56 PF18662.1 gi|452210166|ref|YP_007490280.1| - 0.042 13.9 2.7 3.1 7.9 0.0 2.9 3 0 0 3 3 3 0 Cch helix turn helix domain AAA_34 PF13872.6 gi|452210166|ref|YP_007490280.1| - 0.12 11.3 0.0 0.24 10.2 0.0 1.5 1 0 0 1 1 1 0 P-loop containing NTP hydrolase pore-1 AAA_30 PF13604.6 gi|452210166|ref|YP_007490280.1| - 0.18 11.5 0.0 0.38 10.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 gi|452210166|ref|YP_007490280.1| - 0.54 10.7 6.7 12 6.3 3.3 3.2 3 1 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) AAA_11 PF13086.6 gi|452210166|ref|YP_007490280.1| - 0.81 9.4 3.9 1.1 9.0 0.0 2.1 1 1 1 2 2 2 0 AAA domain NosD PF05048.13 gi|452210168|ref|YP_007490282.1| - 9.6e-49 165.8 32.0 1.5e-48 165.2 32.0 1.3 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) PKD PF00801.20 gi|452210168|ref|YP_007490282.1| - 5.7e-15 54.9 10.2 9.6e-15 54.2 8.2 2.2 2 0 0 2 2 2 1 PKD domain Beta_helix PF13229.6 gi|452210168|ref|YP_007490282.1| - 3.1e-13 49.9 42.4 4.4e-13 49.4 39.9 2.3 1 1 1 2 2 2 2 Right handed beta helix region Pectinesterase PF01095.19 gi|452210168|ref|YP_007490282.1| - 0.024 13.4 0.1 0.024 13.4 0.1 2.4 3 0 0 3 3 3 0 Pectinesterase PKD_3 PF16820.5 gi|452210168|ref|YP_007490282.1| - 0.035 13.9 0.4 0.092 12.5 0.4 1.7 1 0 0 1 1 1 0 PKD-like domain DUF3715 PF12509.8 gi|452210168|ref|YP_007490282.1| - 1.1 9.2 3.2 9.3 6.2 0.0 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF3715) NosD PF05048.13 gi|452210169|ref|YP_007490283.1| - 2e-56 191.0 30.5 3.9e-56 190.0 28.5 2.4 2 0 0 2 2 2 1 Periplasmic copper-binding protein (NosD) PKD PF00801.20 gi|452210169|ref|YP_007490283.1| - 6.2e-32 109.3 26.7 2.3e-13 49.8 1.6 4.5 4 0 0 4 4 4 4 PKD domain Beta_helix PF13229.6 gi|452210169|ref|YP_007490283.1| - 3.3e-17 62.8 27.7 3.3e-17 62.8 27.7 3.0 3 0 0 3 3 3 1 Right handed beta helix region Y_Y_Y PF07495.13 gi|452210169|ref|YP_007490283.1| - 0.0017 18.3 12.9 1.8 8.6 0.4 5.2 4 0 0 4 4 4 2 Y_Y_Y domain DUF5305 PF17231.2 gi|452210169|ref|YP_007490283.1| - 0.0092 15.4 0.3 0.0092 15.4 0.3 3.0 4 0 0 4 4 4 1 Family of unknown function (DUF5305) DUF3324 PF11797.8 gi|452210169|ref|YP_007490283.1| - 0.036 14.1 4.1 25 4.8 0.1 4.8 5 0 0 5 5 5 0 Protein of unknown function C-terminal (DUF3324) MPDZ_u10 PF16667.5 gi|452210169|ref|YP_007490283.1| - 0.076 13.9 0.2 0.5 11.3 0.2 2.4 2 0 0 2 2 2 0 Unstructured region 10 on multiple PDZ protein PKD_3 PF16820.5 gi|452210169|ref|YP_007490283.1| - 0.27 11.0 9.5 9.7 6.0 0.1 4.5 4 0 0 4 4 4 0 PKD-like domain MG2 PF01835.19 gi|452210169|ref|YP_007490283.1| - 0.39 11.2 5.0 7.6 7.1 0.1 4.3 4 1 0 5 5 5 0 MG2 domain Spore_YtfJ PF09579.10 gi|452210170|ref|YP_007490284.1| - 1e-19 70.4 3.2 1.6e-19 69.8 3.2 1.3 1 0 0 1 1 1 1 Sporulation protein YtfJ (Spore_YtfJ) DUF2953 PF11167.8 gi|452210172|ref|YP_007490286.1| - 1.1e-14 54.2 0.0 2.5e-14 53.1 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF2953) Tetraspanin PF00335.20 gi|452210172|ref|YP_007490286.1| - 0.048 13.4 0.0 0.08 12.6 0.0 1.4 1 0 0 1 1 1 0 Tetraspanin family Sigma_reg_N PF13800.6 gi|452210172|ref|YP_007490286.1| - 4.3 7.7 8.1 0.85 9.9 4.1 1.8 2 0 0 2 2 2 0 Sigma factor regulator N-terminal Srg PF02118.21 gi|452210172|ref|YP_007490286.1| - 5.2 6.7 13.0 0.25 11.0 6.8 1.7 2 0 0 2 2 2 0 Srg family chemoreceptor GHMP_kinases_N PF00288.26 gi|452210173|ref|YP_007490287.1| - 5.2e-10 39.4 1.3 1.3e-09 38.2 1.3 1.7 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|452210173|ref|YP_007490287.1| - 1.7e-07 31.5 0.0 3.2e-07 30.6 0.0 1.5 1 0 0 1 1 1 1 GHMP kinases C terminal Nop PF01798.18 gi|452210174|ref|YP_007490288.1| - 1.7e-53 181.5 0.0 1e-52 178.9 0.0 2.0 1 1 0 1 1 1 1 snoRNA binding domain, fibrillarin Fibrillarin PF01269.17 gi|452210175|ref|YP_007490289.1| - 4.9e-89 297.3 0.0 5.7e-89 297.1 0.0 1.0 1 0 0 1 1 1 1 Fibrillarin HTH_5 PF01022.20 gi|452210176|ref|YP_007490290.1| - 4.9e-10 39.1 0.3 7.8e-10 38.5 0.3 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|452210176|ref|YP_007490290.1| - 3.6e-09 36.6 0.2 6.1e-09 35.8 0.0 1.5 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|452210176|ref|YP_007490290.1| - 1.3e-05 24.7 0.0 6.2e-05 22.5 0.1 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|452210176|ref|YP_007490290.1| - 6.7e-05 22.7 0.0 0.00016 21.5 0.0 1.6 2 0 0 2 2 2 1 MarR family DUF4430 PF14478.6 gi|452210176|ref|YP_007490290.1| - 0.00034 21.1 1.0 0.0013 19.3 1.0 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF4430) MarR_2 PF12802.7 gi|452210176|ref|YP_007490290.1| - 0.00074 19.4 0.0 0.0013 18.6 0.0 1.3 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|452210176|ref|YP_007490290.1| - 0.0039 17.0 0.2 0.047 13.6 0.2 2.3 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB DUF4423 PF14394.6 gi|452210176|ref|YP_007490290.1| - 0.0071 16.1 0.1 0.013 15.2 0.0 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4423) HxlR PF01638.17 gi|452210176|ref|YP_007490290.1| - 0.0098 15.7 0.0 0.02 14.7 0.0 1.5 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_45 PF14947.6 gi|452210176|ref|YP_007490290.1| - 0.051 13.6 0.0 0.16 12.0 0.0 1.8 1 1 1 2 2 2 0 Winged helix-turn-helix Rrf2 PF02082.20 gi|452210176|ref|YP_007490290.1| - 0.072 13.5 0.1 0.19 12.1 0.1 1.6 1 0 0 1 1 1 0 Transcriptional regulator HTH_IclR PF09339.10 gi|452210176|ref|YP_007490290.1| - 0.091 12.6 0.0 0.3 10.9 0.0 1.8 2 0 0 2 2 2 0 IclR helix-turn-helix domain Fe_dep_repress PF01325.19 gi|452210176|ref|YP_007490290.1| - 0.11 12.6 0.4 0.31 11.3 0.0 1.9 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain Terminase_5 PF06056.12 gi|452210176|ref|YP_007490290.1| - 0.14 12.1 0.0 0.69 9.8 0.0 2.0 2 0 0 2 2 2 0 Putative ATPase subunit of terminase (gpP-like) DUF2162 PF09930.9 gi|452210177|ref|YP_007490291.1| - 8e-69 231.5 21.1 9e-69 231.3 21.1 1.0 1 0 0 1 1 1 1 Predicted transporter (DUF2162) DUF3180 PF11377.8 gi|452210177|ref|YP_007490291.1| - 0.61 10.2 6.1 1.9 8.7 0.2 3.1 2 1 2 4 4 3 0 Protein of unknown function (DUF3180) ABC2_membrane_5 PF13346.6 gi|452210177|ref|YP_007490291.1| - 1.3 8.6 22.0 0.79 9.2 5.8 2.3 1 1 1 2 2 2 0 ABC-2 family transporter protein MotA_ExbB PF01618.16 gi|452210178|ref|YP_007490292.1| - 1.2e-11 44.4 0.0 2.1e-11 43.7 0.0 1.5 1 0 0 1 1 1 1 MotA/TolQ/ExbB proton channel family VIT1 PF01988.19 gi|452210178|ref|YP_007490292.1| - 0.00072 19.5 0.1 0.0012 18.8 0.0 1.3 1 1 0 1 1 1 1 VIT family Spore_III_AB PF09548.10 gi|452210178|ref|YP_007490292.1| - 0.046 13.8 1.3 3.3 7.8 0.1 2.7 2 1 1 3 3 3 0 Stage III sporulation protein AB (spore_III_AB) DUF2149 PF09919.9 gi|452210179|ref|YP_007490293.1| - 2.4e-32 111.0 0.1 3e-32 110.7 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2149) Zip PF02535.22 gi|452210180|ref|YP_007490294.1| - 2.4e-22 79.6 22.4 2.8e-18 66.2 4.4 2.1 2 0 0 2 2 2 2 ZIP Zinc transporter DUF1453 PF07301.11 gi|452210180|ref|YP_007490294.1| - 0.027 14.5 0.6 0.027 14.5 0.6 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1453) SnoaL_2 PF12680.7 gi|452210181|ref|YP_007490295.1| - 4.5e-05 24.0 0.0 4.9e-05 23.9 0.0 1.0 1 0 0 1 1 1 1 SnoaL-like domain SnoaL PF07366.12 gi|452210181|ref|YP_007490295.1| - 0.0015 18.3 0.0 0.0017 18.2 0.0 1.0 1 0 0 1 1 1 1 SnoaL-like polyketide cyclase CobN-Mg_chel PF02514.16 gi|452210182|ref|YP_007490296.1| - 2.3e-301 1002.5 0.0 2.9e-301 1002.2 0.0 1.1 1 0 0 1 1 1 1 CobN/Magnesium Chelatase SMI1_KNR4 PF09346.10 gi|452210182|ref|YP_007490296.1| - 0.05 14.0 0.1 0.28 11.6 0.1 2.3 1 0 0 1 1 1 0 SMI1 / KNR4 family (SUKH-1) CobN-Mg_chel PF02514.16 gi|452210185|ref|YP_007490299.1| - 0 1113.9 0.1 0 1113.2 0.0 1.3 2 0 0 2 2 2 1 CobN/Magnesium Chelatase CarboxypepD_reg PF13620.6 gi|452210185|ref|YP_007490299.1| - 4.1e-05 23.8 0.1 0.00017 21.8 0.1 2.0 1 0 0 1 1 1 1 Carboxypeptidase regulatory-like domain CarbopepD_reg_2 PF13715.6 gi|452210185|ref|YP_007490299.1| - 0.0024 17.8 0.0 0.0087 16.0 0.0 2.0 1 0 0 1 1 1 1 CarboxypepD_reg-like domain DUF1233 PF06806.12 gi|452210185|ref|YP_007490299.1| - 0.037 13.6 0.0 0.11 12.1 0.0 1.7 1 0 0 1 1 1 0 Putative excisionase (DUF1233) SdrD_B PF17210.3 gi|452210185|ref|YP_007490299.1| - 0.063 13.5 0.1 0.2 11.9 0.1 1.8 1 0 0 1 1 1 0 SdrD B-like domain Spore_coat_CotO PF14153.6 gi|452210185|ref|YP_007490299.1| - 1.3 8.9 7.2 2.4 8.1 7.2 1.3 1 0 0 1 1 1 0 Spore coat protein CotO TrmO PF01980.16 gi|452210186|ref|YP_007490300.1| - 1.9e-29 102.3 0.0 2.3e-29 102.0 0.0 1.1 1 0 0 1 1 1 1 tRNA-methyltransferase O FmdE PF02663.14 gi|452210187|ref|YP_007490301.1| - 9.7e-31 106.5 0.0 1.2e-30 106.3 0.0 1.1 1 0 0 1 1 1 1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon zf-dskA_traR PF01258.17 gi|452210187|ref|YP_007490301.1| - 1.4e-07 31.3 0.9 2.8e-07 30.3 0.9 1.6 1 0 0 1 1 1 1 Prokaryotic dksA/traR C4-type zinc finger zinc_ribbon_9 PF14369.6 gi|452210187|ref|YP_007490301.1| - 0.07 13.4 0.3 0.5 10.7 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon DUF4880 PF16220.5 gi|452210187|ref|YP_007490301.1| - 0.11 12.4 0.1 0.2 11.6 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4880) DUF1936 PF09151.10 gi|452210187|ref|YP_007490301.1| - 3.3 7.7 7.3 0.33 10.9 2.6 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1936) DUF1724 PF08350.10 gi|452210188|ref|YP_007490302.1| - 8.9e-24 83.4 0.1 2e-23 82.3 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) Beta_lactamase3 PF17030.5 gi|452210188|ref|YP_007490302.1| - 0.12 11.6 0.0 0.17 11.1 0.0 1.2 1 0 0 1 1 1 0 Putative beta-lactamase-like family ABC_tran PF00005.27 gi|452210190|ref|YP_007490304.1| - 8.8e-34 117.0 0.1 1.8e-33 116.0 0.0 1.6 2 0 0 2 2 1 1 ABC transporter SMC_N PF02463.19 gi|452210190|ref|YP_007490304.1| - 1e-08 34.9 0.0 1.6e-05 24.5 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|452210190|ref|YP_007490304.1| - 2e-07 31.2 0.5 0.0025 17.7 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|452210190|ref|YP_007490304.1| - 5e-05 23.7 0.3 9.7e-05 22.8 0.3 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|452210190|ref|YP_007490304.1| - 0.00025 20.7 0.1 0.00049 19.8 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain NB-ARC PF00931.22 gi|452210190|ref|YP_007490304.1| - 0.00031 20.0 0.1 0.0036 16.5 0.1 2.0 1 1 0 1 1 1 1 NB-ARC domain AAA_22 PF13401.6 gi|452210190|ref|YP_007490304.1| - 0.0066 16.7 0.3 0.015 15.5 0.3 1.9 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|452210190|ref|YP_007490304.1| - 0.0068 16.3 0.0 0.014 15.3 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_33 PF13671.6 gi|452210190|ref|YP_007490304.1| - 0.0083 16.3 0.4 0.041 14.1 0.4 2.0 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|452210190|ref|YP_007490304.1| - 0.01 15.6 0.2 0.066 12.9 0.1 1.9 2 0 0 2 2 2 0 AAA domain IstB_IS21 PF01695.17 gi|452210190|ref|YP_007490304.1| - 0.034 13.9 0.1 0.22 11.2 0.0 2.0 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_15 PF13175.6 gi|452210190|ref|YP_007490304.1| - 0.038 13.7 0.0 3.7 7.1 0.0 2.1 1 1 1 2 2 2 0 AAA ATPase domain AAA_25 PF13481.6 gi|452210190|ref|YP_007490304.1| - 0.04 13.5 0.2 0.19 11.3 0.3 1.9 2 0 0 2 2 2 0 AAA domain Rad17 PF03215.15 gi|452210190|ref|YP_007490304.1| - 0.045 13.7 0.1 0.12 12.3 0.1 1.7 2 0 0 2 2 2 0 Rad17 P-loop domain FtsK_SpoIIIE PF01580.18 gi|452210190|ref|YP_007490304.1| - 0.054 12.8 0.2 5.3 6.3 0.1 2.2 2 0 0 2 2 2 0 FtsK/SpoIIIE family T2SSE PF00437.20 gi|452210190|ref|YP_007490304.1| - 0.058 12.4 0.1 0.12 11.5 0.1 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_18 PF13238.6 gi|452210190|ref|YP_007490304.1| - 0.085 13.4 0.4 0.45 11.1 0.4 2.3 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|452210190|ref|YP_007490304.1| - 0.09 13.3 0.3 0.09 13.3 0.3 1.9 2 1 0 2 2 2 0 AAA domain ATPase PF06745.13 gi|452210190|ref|YP_007490304.1| - 0.1 12.0 0.8 4.9 6.4 0.0 2.3 2 0 0 2 2 2 0 KaiC NACHT PF05729.12 gi|452210190|ref|YP_007490304.1| - 0.11 12.4 0.4 0.34 10.8 0.2 2.0 1 1 0 1 1 1 0 NACHT domain SbcCD_C PF13558.6 gi|452210190|ref|YP_007490304.1| - 0.11 12.7 0.1 2 8.7 0.1 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit ATP_bind_1 PF03029.17 gi|452210190|ref|YP_007490304.1| - 0.21 11.3 0.2 3.5 7.4 0.1 2.1 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_24 PF13479.6 gi|452210190|ref|YP_007490304.1| - 0.22 11.2 0.5 0.45 10.2 0.2 1.6 2 0 0 2 2 2 0 AAA domain MacB_PCD PF12704.7 gi|452210191|ref|YP_007490305.1| - 1.1e-22 81.4 0.7 1.1e-22 81.4 0.7 2.4 3 0 0 3 3 3 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|452210191|ref|YP_007490305.1| - 3.4e-15 56.3 8.8 3.4e-15 56.3 8.8 3.3 4 0 0 4 4 4 1 FtsX-like permease family DUF2613 PF11021.8 gi|452210191|ref|YP_007490305.1| - 0.16 12.1 4.3 0.5 10.5 0.1 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2613) DUF4849 PF16141.5 gi|452210191|ref|YP_007490305.1| - 0.17 11.1 0.0 0.26 10.5 0.0 1.1 1 0 0 1 1 1 0 Putative glycoside hydrolase Family 18, chitinase_18 HRG PF16954.5 gi|452210191|ref|YP_007490305.1| - 0.45 10.9 0.1 0.45 10.9 0.1 2.9 3 0 0 3 3 3 0 Haem-transporter, endosomal/lysosomal, haem-responsive gene TcfC PF16967.5 gi|452210192|ref|YP_007490306.1| - 0.01 15.3 0.3 1.5 8.4 0.0 2.7 2 1 0 2 2 2 2 E-set like domain AA_kinase PF00696.28 gi|452210193|ref|YP_007490307.1| - 2.1e-25 89.7 0.8 6.5e-25 88.1 0.8 1.7 1 1 0 1 1 1 1 Amino acid kinase family VAPB_antitox PF02697.14 gi|452210194|ref|YP_007490308.1| - 0.041 14.7 0.1 0.16 12.8 0.2 2.0 2 0 0 2 2 2 0 Putative antitoxin TetR_N PF00440.23 gi|452210196|ref|YP_007490310.1| - 8e-17 60.8 0.0 1.3e-16 60.1 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_10 PF16295.5 gi|452210196|ref|YP_007490310.1| - 1.6e-09 38.2 0.0 2.1e-09 37.8 0.0 1.2 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain HTH_Tnp_1_2 PF13022.6 gi|452210196|ref|YP_007490310.1| - 0.091 12.9 0.0 0.35 11.0 0.0 1.9 2 1 1 3 3 3 0 Helix-turn-helix of insertion element transposase Aldo_ket_red PF00248.21 gi|452210197|ref|YP_007490311.1| - 3.5e-39 134.8 0.0 1.1e-37 129.8 0.0 2.1 1 1 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.6 gi|452210197|ref|YP_007490311.1| - 2.4e-12 47.2 6.5 5.3e-12 46.1 6.5 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452210197|ref|YP_007490311.1| - 3.8e-09 36.6 6.5 7e-09 35.7 6.5 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|452210197|ref|YP_007490311.1| - 2.2e-05 24.5 5.2 0.0037 17.4 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|452210197|ref|YP_007490311.1| - 0.0001 22.7 6.2 0.00022 21.6 6.2 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|452210197|ref|YP_007490311.1| - 0.00026 21.2 2.8 0.11 12.7 0.3 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|452210197|ref|YP_007490311.1| - 0.00028 21.0 5.8 0.054 13.6 0.3 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|452210197|ref|YP_007490311.1| - 0.0023 17.7 10.2 0.0047 16.7 1.8 2.6 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_16 PF13484.6 gi|452210197|ref|YP_007490311.1| - 0.0031 18.4 4.6 0.094 13.7 0.3 2.5 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_22 PF17179.4 gi|452210197|ref|YP_007490311.1| - 0.0042 17.9 2.6 2.1 9.3 0.2 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_20 PF14691.6 gi|452210197|ref|YP_007490311.1| - 0.0069 16.2 3.7 0.0092 15.7 0.2 2.2 2 0 0 2 2 2 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_6 PF12837.7 gi|452210197|ref|YP_007490311.1| - 0.023 14.8 1.1 0.023 14.8 1.1 2.6 2 1 0 2 2 2 0 4Fe-4S binding domain AP_endonuc_2 PF01261.24 gi|452210197|ref|YP_007490311.1| - 0.095 12.1 0.3 3.7 6.9 0.3 3.3 3 1 0 3 3 3 0 Xylose isomerase-like TIM barrel Fer4_2 PF12797.7 gi|452210197|ref|YP_007490311.1| - 1.3 9.2 14.7 0.61 10.3 2.2 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_7 PF12838.7 gi|452210197|ref|YP_007490311.1| - 2.3 8.9 14.2 27 5.4 14.3 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|452210197|ref|YP_007490311.1| - 5.4 7.8 13.6 1.7 9.3 2.2 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain AIRC PF00731.20 gi|452210198|ref|YP_007490312.1| - 3.1e-17 62.5 2.8 3.1e-17 62.5 2.8 1.7 2 0 0 2 2 2 1 AIR carboxylase RRF PF01765.19 gi|452210198|ref|YP_007490312.1| - 0.026 14.5 0.0 0.048 13.6 0.0 1.4 1 0 0 1 1 1 0 Ribosome recycling factor PhnJ PF06007.11 gi|452210198|ref|YP_007490312.1| - 0.16 11.0 0.1 0.38 9.7 0.1 1.6 1 1 0 1 1 1 0 Phosphonate metabolism protein PhnJ DUF111 PF01969.17 gi|452210199|ref|YP_007490313.1| - 3.4e-121 404.8 0.1 3.9e-121 404.7 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF111 Semialdhyde_dhC PF02774.18 gi|452210200|ref|YP_007490314.1| - 6e-37 127.5 0.0 9.9e-37 126.8 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.24 gi|452210200|ref|YP_007490314.1| - 1.3e-34 119.2 0.0 2.2e-34 118.5 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.22 gi|452210200|ref|YP_007490314.1| - 0.0012 19.7 0.0 0.002 19.0 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_10 PF13460.6 gi|452210200|ref|YP_007490314.1| - 0.0014 18.5 0.1 0.0023 17.9 0.1 1.3 1 0 0 1 1 1 1 NAD(P)H-binding DXP_reductoisom PF02670.16 gi|452210200|ref|YP_007490314.1| - 0.0026 18.5 0.0 0.0051 17.5 0.0 1.6 1 0 0 1 1 1 1 1-deoxy-D-xylulose 5-phosphate reductoisomerase Sacchrp_dh_NADP PF03435.18 gi|452210200|ref|YP_007490314.1| - 0.017 15.4 0.0 0.03 14.6 0.0 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain DapB_N PF01113.20 gi|452210200|ref|YP_007490314.1| - 0.021 15.0 0.0 0.04 14.0 0.0 1.5 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus Fer4 PF00037.27 gi|452210201|ref|YP_007490315.1| - 4.1e-18 64.4 16.9 2.3e-09 36.7 5.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|452210201|ref|YP_007490315.1| - 1.7e-12 47.2 26.0 3.2e-09 36.7 14.1 1.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452210201|ref|YP_007490315.1| - 2.9e-12 46.5 12.5 3.4e-12 46.3 12.5 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|452210201|ref|YP_007490315.1| - 1.4e-11 44.8 12.0 1.9e-11 44.4 12.0 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|452210201|ref|YP_007490315.1| - 5.4e-11 42.1 17.1 5.6e-06 26.2 5.9 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|452210201|ref|YP_007490315.1| - 6.4e-11 41.7 14.6 1.8e-05 24.6 3.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|452210201|ref|YP_007490315.1| - 7.1e-10 39.7 12.6 5.1e-05 24.1 1.1 2.0 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|452210201|ref|YP_007490315.1| - 2.1e-09 37.3 13.9 4.2e-09 36.4 13.9 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|452210201|ref|YP_007490315.1| - 1.7e-08 34.3 14.8 0.00043 20.6 2.2 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|452210201|ref|YP_007490315.1| - 1e-07 32.4 12.7 0.00015 22.2 0.6 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|452210201|ref|YP_007490315.1| - 6.8e-07 29.7 14.2 0.003 18.1 4.5 2.4 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_11 PF13247.6 gi|452210201|ref|YP_007490315.1| - 8.8e-07 29.0 5.9 8.8e-07 29.0 5.9 1.0 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|452210201|ref|YP_007490315.1| - 7.5e-06 26.3 14.6 0.0075 16.7 2.0 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|452210201|ref|YP_007490315.1| - 2.6e-05 25.0 7.6 0.041 14.7 0.8 2.0 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|452210201|ref|YP_007490315.1| - 3.6e-05 24.4 18.9 0.013 16.4 6.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.6 gi|452210201|ref|YP_007490315.1| - 0.00011 22.8 16.9 0.00091 19.9 3.1 2.8 1 1 1 2 2 2 2 4Fe-4S single cluster domain Fer4_18 PF13746.6 gi|452210201|ref|YP_007490315.1| - 0.0081 16.3 11.4 0.013 15.7 11.4 1.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain ETF_QO PF05187.13 gi|452210201|ref|YP_007490315.1| - 0.24 11.6 7.3 0.82 9.8 1.0 2.0 1 1 1 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S HTH_45 PF14947.6 gi|452210202|ref|YP_007490316.1| - 0.041 13.9 0.1 0.064 13.3 0.1 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix Scaffolding_pro PF11418.8 gi|452210202|ref|YP_007490316.1| - 0.062 13.8 0.0 0.07 13.7 0.0 1.2 1 0 0 1 1 1 0 Phi29 scaffolding protein HemN_C PF06969.16 gi|452210202|ref|YP_007490316.1| - 0.066 13.3 0.0 0.097 12.8 0.0 1.3 1 0 0 1 1 1 0 HemN C-terminal domain cobW PF02492.19 gi|452210203|ref|YP_007490317.1| - 2e-37 128.5 0.1 2.6e-37 128.1 0.1 1.2 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 gi|452210203|ref|YP_007490317.1| - 0.00072 18.6 0.8 0.0046 16.0 0.8 2.1 1 1 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB Viral_helicase1 PF01443.18 gi|452210203|ref|YP_007490317.1| - 0.009 15.8 0.1 0.018 14.8 0.1 1.5 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase Zeta_toxin PF06414.12 gi|452210203|ref|YP_007490317.1| - 0.014 14.7 0.0 0.035 13.4 0.0 1.7 1 0 0 1 1 1 0 Zeta toxin GTP_EFTU PF00009.27 gi|452210203|ref|YP_007490317.1| - 0.016 14.8 0.3 4.4 6.8 0.0 3.0 3 0 0 3 3 3 0 Elongation factor Tu GTP binding domain TrwB_AAD_bind PF10412.9 gi|452210203|ref|YP_007490317.1| - 0.034 13.0 0.3 0.058 12.3 0.3 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain SRP54 PF00448.22 gi|452210203|ref|YP_007490317.1| - 0.038 13.6 0.1 0.072 12.7 0.1 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain NTPase_1 PF03266.15 gi|452210203|ref|YP_007490317.1| - 0.049 13.5 0.3 0.16 11.9 0.1 2.0 2 0 0 2 2 2 0 NTPase CinA_KH PF18146.1 gi|452210203|ref|YP_007490317.1| - 0.052 13.7 0.1 4.3 7.6 0.1 2.7 2 0 0 2 2 2 0 Damage-inducible protein CinA KH domain AAA_30 PF13604.6 gi|452210203|ref|YP_007490317.1| - 0.053 13.2 0.1 0.1 12.3 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|452210203|ref|YP_007490317.1| - 0.062 13.6 0.0 0.19 12.0 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_11 PF13086.6 gi|452210203|ref|YP_007490317.1| - 0.1 12.4 1.9 3.5 7.3 0.1 2.6 3 0 0 3 3 3 0 AAA domain LpxK PF02606.14 gi|452210203|ref|YP_007490317.1| - 0.1 11.7 0.0 0.2 10.7 0.0 1.4 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase ATP_bind_1 PF03029.17 gi|452210203|ref|YP_007490317.1| - 0.1 12.3 0.1 0.4 10.4 0.0 1.8 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein Thymidylate_kin PF02223.17 gi|452210203|ref|YP_007490317.1| - 0.16 11.6 0.8 1 9.0 0.0 2.5 3 0 0 3 3 3 0 Thymidylate kinase CbiA PF01656.23 gi|452210203|ref|YP_007490317.1| - 0.33 11.0 1.2 3.1 7.9 0.1 2.5 2 1 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain Leptin PF02024.15 gi|452210206|ref|YP_007490320.1| - 0.089 12.6 0.2 0.096 12.5 0.2 1.1 1 0 0 1 1 1 0 Leptin MORN_2 PF07661.13 gi|452210207|ref|YP_007490321.1| - 0.032 14.4 0.4 9.8 6.8 0.0 3.1 2 1 1 3 3 3 0 MORN repeat variant Pput2613-deam PF14427.6 gi|452210207|ref|YP_007490321.1| - 0.13 12.2 2.1 0.2 11.5 0.3 2.3 2 1 1 3 3 3 0 Pput_2613-like deaminase Radical_SAM PF04055.21 gi|452210208|ref|YP_007490322.1| - 3.9e-09 37.1 0.2 6.9e-09 36.3 0.2 1.4 1 0 0 1 1 1 1 Radical SAM superfamily SDP_N PF12278.8 gi|452210209|ref|YP_007490323.1| - 0.052 13.7 0.1 0.052 13.7 0.1 1.1 1 0 0 1 1 1 0 Sex determination protein N terminal tRNA_SAD PF07973.14 gi|452210210|ref|YP_007490324.1| - 0.09 12.9 0.0 0.32 11.1 0.0 1.8 1 1 0 1 1 1 0 Threonyl and Alanyl tRNA synthetase second additional domain DeoC PF01791.9 gi|452210211|ref|YP_007490325.1| - 8.4e-60 202.3 0.0 1e-59 202.0 0.0 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase OMPdecase PF00215.24 gi|452210211|ref|YP_007490325.1| - 5.1e-06 26.2 0.0 7.5e-06 25.7 0.0 1.2 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family ThiG PF05690.14 gi|452210211|ref|YP_007490325.1| - 0.029 13.7 1.2 0.069 12.5 0.3 1.9 2 0 0 2 2 2 0 Thiazole biosynthesis protein ThiG dUTPase PF00692.19 gi|452210212|ref|YP_007490326.1| - 3.5e-11 42.9 0.0 5e-11 42.4 0.0 1.2 1 0 0 1 1 1 1 dUTPase DCD PF06559.11 gi|452210212|ref|YP_007490326.1| - 0.021 13.6 0.0 0.073 11.8 0.0 1.8 1 1 0 1 1 1 0 2'-deoxycytidine 5'-triphosphate deaminase (DCD) DUF2341 PF10102.9 gi|452210214|ref|YP_007490328.1| - 9.6e-26 90.2 0.0 2.7e-25 88.7 0.0 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF2341) Peripla_BP_6 PF13458.6 gi|452210214|ref|YP_007490328.1| - 0.14 11.8 0.0 0.62 9.7 0.0 2.0 3 0 0 3 3 3 0 Periplasmic binding protein PPP4R2 PF09184.11 gi|452210215|ref|YP_007490329.1| - 6.2 6.3 9.5 7.5 6.1 9.5 1.1 1 0 0 1 1 1 0 PPP4R2 FMN_red PF03358.15 gi|452210216|ref|YP_007490330.1| - 1.2e-20 73.9 0.0 1.4e-20 73.6 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|452210216|ref|YP_007490330.1| - 3.1e-17 63.0 0.0 3.7e-17 62.7 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.7 gi|452210216|ref|YP_007490330.1| - 0.0059 16.8 0.0 0.0083 16.4 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain FMN_red PF03358.15 gi|452210217|ref|YP_007490331.1| - 4.2e-27 94.8 0.0 5.1e-27 94.5 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|452210217|ref|YP_007490331.1| - 9.3e-20 71.2 0.0 1.1e-19 71.0 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.7 gi|452210217|ref|YP_007490331.1| - 0.022 15.0 0.0 0.23 11.7 0.0 2.0 2 0 0 2 2 2 0 Flavodoxin domain Glyco_trans_4_5 PF16994.5 gi|452210217|ref|YP_007490331.1| - 0.16 11.6 0.0 0.22 11.1 0.0 1.1 1 0 0 1 1 1 0 Glycosyl-transferase family 4 MacB_PCD PF12704.7 gi|452210219|ref|YP_007490333.1| - 6e-26 92.0 4.0 1.2e-25 91.0 4.0 1.5 1 0 0 1 1 1 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|452210219|ref|YP_007490333.1| - 1.5e-11 44.6 6.3 1.5e-11 44.6 6.3 3.1 3 0 0 3 3 3 1 FtsX-like permease family SelR PF01641.18 gi|452210220|ref|YP_007490334.1| - 4.2e-56 188.2 0.2 4.9e-56 188.0 0.2 1.0 1 0 0 1 1 1 1 SelR domain TF_Zn_Ribbon PF08271.12 gi|452210220|ref|YP_007490334.1| - 0.00085 18.8 0.3 1.5 8.4 0.0 2.6 2 0 0 2 2 2 2 TFIIB zinc-binding zinc_ribbon_10 PF10058.9 gi|452210220|ref|YP_007490334.1| - 0.0011 18.7 1.2 0.043 13.5 0.1 2.2 2 0 0 2 2 2 1 Predicted integral membrane zinc-ribbon metal-binding protein ADD_ATRX PF17981.1 gi|452210220|ref|YP_007490334.1| - 0.0062 16.4 0.1 1.3 9.0 0.0 2.3 2 0 0 2 2 2 1 Cysteine Rich ADD domain Yippee-Mis18 PF03226.14 gi|452210220|ref|YP_007490334.1| - 0.0096 16.1 0.3 0.027 14.7 0.3 1.7 1 1 1 2 2 2 1 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly DUF2318 PF10080.9 gi|452210220|ref|YP_007490334.1| - 0.017 15.2 0.9 4.9 7.3 0.1 2.2 1 1 1 2 2 2 0 Predicted membrane protein (DUF2318) zf_UBZ PF18439.1 gi|452210220|ref|YP_007490334.1| - 0.017 14.7 0.5 5.1 6.8 0.1 2.5 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zf-ribbon_3 PF13248.6 gi|452210220|ref|YP_007490334.1| - 0.03 13.7 0.7 3.3 7.2 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain HNH_5 PF14279.6 gi|452210220|ref|YP_007490334.1| - 0.033 14.0 0.3 0.7 9.8 0.0 2.2 2 0 0 2 2 2 0 HNH endonuclease C1_2 PF03107.16 gi|452210220|ref|YP_007490334.1| - 0.055 13.8 0.2 0.83 10.0 0.0 2.2 2 0 0 2 2 2 0 C1 domain HECT_2 PF09814.9 gi|452210220|ref|YP_007490334.1| - 0.067 12.0 0.2 0.35 9.7 0.3 1.8 1 1 1 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding GFA PF04828.14 gi|452210220|ref|YP_007490334.1| - 0.07 13.5 1.0 7.1 7.0 0.1 2.2 1 1 0 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme zinc_ribbon_2 PF13240.6 gi|452210220|ref|YP_007490334.1| - 0.077 12.7 1.0 6.5 6.6 0.0 2.8 3 0 0 3 3 3 0 zinc-ribbon domain A2L_zn_ribbon PF08792.10 gi|452210220|ref|YP_007490334.1| - 0.078 12.7 2.4 0.8 9.5 0.3 2.4 2 0 0 2 2 2 0 A2L zinc ribbon domain DZR PF12773.7 gi|452210220|ref|YP_007490334.1| - 0.082 12.9 0.7 0.46 10.5 0.7 2.1 1 1 0 1 1 1 0 Double zinc ribbon DUF678 PF05077.12 gi|452210220|ref|YP_007490334.1| - 0.1 12.8 0.1 16 5.7 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF678) HAD_2 PF13419.6 gi|452210222|ref|YP_007490336.1| - 3.1e-34 118.6 0.0 3.7e-34 118.3 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|452210222|ref|YP_007490336.1| - 1.4e-18 68.0 0.0 6.4e-17 62.5 0.0 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|452210222|ref|YP_007490336.1| - 3.7e-05 24.2 0.0 4.8e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|452210222|ref|YP_007490336.1| - 0.00013 21.9 0.0 0.00039 20.4 0.0 1.8 2 0 0 2 2 2 1 HAD-hyrolase-like NIF PF03031.18 gi|452210222|ref|YP_007490336.1| - 0.0081 15.9 0.0 0.075 12.8 0.0 2.4 1 1 0 1 1 1 1 NLI interacting factor-like phosphatase NT5C PF06941.12 gi|452210222|ref|YP_007490336.1| - 0.011 15.6 0.1 0.046 13.6 0.1 1.9 1 1 0 1 1 1 0 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) Hydrolase_6 PF13344.6 gi|452210222|ref|YP_007490336.1| - 0.1 12.7 0.0 1.5 9.0 0.0 2.7 2 1 0 2 2 2 0 Haloacid dehalogenase-like hydrolase Glyco_trans_1_3 PF13528.6 gi|452210223|ref|YP_007490337.1| - 4.9e-20 72.0 0.0 1e-10 41.4 0.0 2.2 2 0 0 2 2 2 2 Glycosyl transferase family 1 Glyco_tran_28_C PF04101.16 gi|452210223|ref|YP_007490337.1| - 1.9e-13 50.8 0.0 3e-13 50.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_transf_4 PF13439.6 gi|452210223|ref|YP_007490337.1| - 1.2e-06 28.7 0.0 3.1e-06 27.3 0.0 1.6 1 0 0 1 1 1 1 Glycosyltransferase Family 4 UDPGT PF00201.18 gi|452210223|ref|YP_007490337.1| - 3.8e-06 26.0 0.0 0.00034 19.5 0.0 2.0 2 0 0 2 2 2 2 UDP-glucoronosyl and UDP-glucosyl transferase Glyco_transf_28 PF03033.20 gi|452210223|ref|YP_007490337.1| - 4.9e-06 26.6 0.0 2.1e-05 24.6 0.0 2.1 2 1 1 3 3 3 1 Glycosyltransferase family 28 N-terminal domain Glyco_trans_4_2 PF13477.6 gi|452210223|ref|YP_007490337.1| - 1.7e-05 24.9 0.0 2.9e-05 24.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_trans_1_4 PF13692.6 gi|452210223|ref|YP_007490337.1| - 0.00078 19.9 0.0 0.0016 18.9 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|452210223|ref|YP_007490337.1| - 0.0011 19.5 0.0 0.0017 18.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glycos_transf_1 PF00534.20 gi|452210223|ref|YP_007490337.1| - 0.0019 17.8 0.0 0.0035 16.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_2 PF00535.26 gi|452210224|ref|YP_007490338.1| - 5.7e-25 88.1 0.0 8.6e-25 87.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|452210224|ref|YP_007490338.1| - 1.5e-05 25.1 0.0 1.6e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|452210224|ref|YP_007490338.1| - 9.1e-05 22.9 0.0 0.00019 21.9 0.0 1.6 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|452210224|ref|YP_007490338.1| - 0.0019 17.7 0.0 0.0031 17.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 gi|452210224|ref|YP_007490338.1| - 0.03 13.8 0.0 0.047 13.2 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family 21 RseC_MucC PF04246.12 gi|452210224|ref|YP_007490338.1| - 0.049 13.6 1.2 0.086 12.8 1.2 1.4 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC PGM_PMM_II PF02879.16 gi|452210224|ref|YP_007490338.1| - 0.11 13.1 0.0 0.31 11.7 0.0 1.8 2 0 0 2 2 2 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Hexapep PF00132.24 gi|452210225|ref|YP_007490339.1| - 2.8e-09 36.3 7.3 2.9e-07 30.0 0.5 3.5 4 0 0 4 4 4 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|452210225|ref|YP_007490339.1| - 2e-05 24.2 5.3 0.0074 16.0 1.0 2.9 2 2 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase RL PF17797.1 gi|452210225|ref|YP_007490339.1| - 0.016 15.2 0.1 0.047 13.6 0.0 1.7 2 0 0 2 2 2 0 RL domain DUF3473 PF11959.8 gi|452210226|ref|YP_007490340.1| - 9.5e-33 113.0 0.1 1.4e-32 112.4 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3473) Polysacc_deac_1 PF01522.21 gi|452210226|ref|YP_007490340.1| - 2.1e-25 89.0 0.0 3.7e-25 88.2 0.0 1.4 1 0 0 1 1 1 1 Polysaccharide deacetylase Glyco_hydro_57 PF03065.15 gi|452210226|ref|YP_007490340.1| - 3.1e-06 26.6 0.0 4.8e-06 26.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyl hydrolase family 57 DUF2334 PF10096.9 gi|452210226|ref|YP_007490340.1| - 0.00059 19.6 0.1 0.001 18.8 0.1 1.6 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2334) Glycos_transf_1 PF00534.20 gi|452210228|ref|YP_007490342.1| - 9.8e-29 100.1 0.2 1.4e-28 99.5 0.2 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|452210228|ref|YP_007490342.1| - 3.5e-22 79.3 0.0 9.2e-22 77.9 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|452210228|ref|YP_007490342.1| - 8.4e-08 32.4 0.0 1.3e-07 31.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|452210228|ref|YP_007490342.1| - 0.00058 20.2 0.0 0.0015 18.9 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.6 gi|452210228|ref|YP_007490342.1| - 0.029 14.4 0.1 0.063 13.3 0.1 1.6 1 0 0 1 1 1 0 Glycosyl transferase 4-like DUF2206 PF09971.9 gi|452210229|ref|YP_007490343.1| - 3.1e-37 128.2 37.2 3.1e-37 128.2 37.2 4.0 2 2 2 4 4 4 1 Predicted membrane protein (DUF2206) DUF1616 PF07760.11 gi|452210229|ref|YP_007490343.1| - 8e-05 22.2 7.7 8e-05 22.2 7.7 2.6 2 0 0 2 2 2 1 Protein of unknown function (DUF1616) Polysacc_synt PF01943.17 gi|452210230|ref|YP_007490344.1| - 3.2e-08 33.3 36.8 3.2e-08 33.3 36.8 2.9 1 1 2 3 3 3 2 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|452210230|ref|YP_007490344.1| - 8.3e-08 32.4 10.3 8.3e-08 32.4 10.3 4.7 2 1 3 5 5 5 1 Polysaccharide biosynthesis C-terminal domain Frag1 PF10277.9 gi|452210231|ref|YP_007490345.1| - 0.025 14.1 1.1 0.026 14.0 1.1 1.0 1 0 0 1 1 1 0 Frag1/DRAM/Sfk1 family Methyltransf_11 PF08241.12 gi|452210232|ref|YP_007490346.1| - 4.1e-21 75.4 0.0 7.5e-21 74.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|452210232|ref|YP_007490346.1| - 6.8e-14 52.4 0.0 1.3e-13 51.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|452210232|ref|YP_007490346.1| - 1.6e-13 50.8 0.0 2.4e-13 50.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|452210232|ref|YP_007490346.1| - 1.6e-12 47.5 0.0 5.5e-12 45.7 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|452210232|ref|YP_007490346.1| - 1.1e-10 42.2 0.0 3e-10 40.7 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain DREV PF05219.12 gi|452210232|ref|YP_007490346.1| - 3.5e-06 26.3 0.0 5.2e-06 25.8 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase MetW PF07021.12 gi|452210232|ref|YP_007490346.1| - 1.3e-05 24.8 0.0 2e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Ubie_methyltran PF01209.18 gi|452210232|ref|YP_007490346.1| - 0.00015 21.2 0.0 0.00021 20.7 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_29 PF03141.16 gi|452210232|ref|YP_007490346.1| - 0.00015 20.5 0.2 0.0003 19.5 0.0 1.6 1 1 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase Trm112p PF03966.16 gi|452210232|ref|YP_007490346.1| - 0.0042 17.6 0.4 0.0094 16.5 0.4 1.6 1 0 0 1 1 1 1 Trm112p-like protein MTS PF05175.14 gi|452210232|ref|YP_007490346.1| - 0.078 12.5 0.0 0.15 11.6 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase small domain UPF0146 PF03686.13 gi|452210232|ref|YP_007490346.1| - 0.084 12.8 0.0 0.89 9.4 0.0 2.3 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0146) NodS PF05401.11 gi|452210232|ref|YP_007490346.1| - 0.11 12.1 0.0 0.16 11.5 0.0 1.3 1 0 0 1 1 1 0 Nodulation protein S (NodS) DUF362 PF04015.12 gi|452210233|ref|YP_007490347.1| - 5.8e-21 75.7 0.0 8.1e-21 75.2 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF362) MtaB PF12176.8 gi|452210235|ref|YP_007490349.1| - 3.6e-233 774.4 3.8 4.1e-233 774.2 3.8 1.0 1 0 0 1 1 1 1 Methanol-cobalamin methyltransferase B subunit B12-binding PF02310.19 gi|452210236|ref|YP_007490350.1| - 8.3e-18 64.6 0.2 1.3e-17 64.0 0.2 1.3 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|452210236|ref|YP_007490350.1| - 2.7e-14 53.4 0.6 1.1e-13 51.3 0.1 2.3 2 1 0 2 2 2 1 B12 binding domain Ocnus PF05005.15 gi|452210236|ref|YP_007490350.1| - 0.15 12.2 0.0 0.27 11.4 0.0 1.3 1 0 0 1 1 1 0 Janus/Ocnus family (Ocnus) DUF1724 PF08350.10 gi|452210238|ref|YP_007490352.1| - 5.9e-19 68.0 0.1 1.5e-18 66.6 0.1 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_45 PF14947.6 gi|452210238|ref|YP_007490352.1| - 0.0028 17.6 0.0 0.007 16.3 0.0 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DUF1724 PF08350.10 gi|452210239|ref|YP_007490353.1| - 5.2e-23 81.0 0.8 9.7e-23 80.1 0.8 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|452210239|ref|YP_007490353.1| - 4.1e-05 23.4 0.4 7.2e-05 22.6 0.4 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|452210239|ref|YP_007490353.1| - 0.0056 16.5 0.1 0.011 15.6 0.1 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.6 gi|452210239|ref|YP_007490353.1| - 0.012 16.1 0.0 0.022 15.2 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_24 PF13412.6 gi|452210239|ref|YP_007490353.1| - 0.021 14.4 0.3 0.043 13.4 0.3 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 gi|452210239|ref|YP_007490353.1| - 0.023 14.6 0.2 0.04 13.9 0.2 1.4 1 0 0 1 1 1 0 HTH domain HTH_20 PF12840.7 gi|452210239|ref|YP_007490353.1| - 0.06 13.4 0.0 0.12 12.5 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_45 PF14947.6 gi|452210239|ref|YP_007490353.1| - 0.067 13.2 0.1 0.14 12.2 0.1 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix MarR PF01047.22 gi|452210239|ref|YP_007490353.1| - 0.13 12.2 0.1 0.31 11.0 0.1 1.6 1 0 0 1 1 1 0 MarR family Rotamase PF00639.21 gi|452210240|ref|YP_007490354.1| - 0.092 13.7 0.0 0.12 13.4 0.0 1.2 1 0 0 1 1 1 0 PPIC-type PPIASE domain Fer4 PF00037.27 gi|452210241|ref|YP_007490355.1| - 9.2e-18 63.3 21.7 9.1e-09 34.8 5.7 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|452210241|ref|YP_007490355.1| - 1.3e-12 47.7 31.3 3.7e-09 36.6 18.4 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|452210241|ref|YP_007490355.1| - 1.3e-11 44.9 29.2 7.9e-09 36.0 16.1 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|452210241|ref|YP_007490355.1| - 3.6e-10 39.5 22.3 5.4e-05 23.1 4.0 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|452210241|ref|YP_007490355.1| - 1.6e-09 37.8 14.4 1.6e-09 37.8 14.4 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452210241|ref|YP_007490355.1| - 7.8e-09 35.1 19.2 7.9e-05 22.5 3.4 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|452210241|ref|YP_007490355.1| - 3.4e-08 33.4 16.3 0.001 19.4 3.6 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|452210241|ref|YP_007490355.1| - 8.7e-08 32.2 30.1 3.1e-06 27.2 17.1 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452210241|ref|YP_007490355.1| - 4.1e-07 30.8 27.9 0.0017 19.3 3.0 2.5 2 1 1 3 3 3 3 4Fe-4S double cluster binding domain Fer4_8 PF13183.6 gi|452210241|ref|YP_007490355.1| - 4.8e-07 30.1 10.2 0.00073 19.9 0.6 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|452210241|ref|YP_007490355.1| - 3.8e-06 27.6 9.8 0.00019 22.2 0.5 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|452210241|ref|YP_007490355.1| - 1.5e-05 25.6 18.9 0.02 15.8 5.4 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_11 PF13247.6 gi|452210241|ref|YP_007490355.1| - 0.00032 20.8 7.7 0.00046 20.3 7.7 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|452210241|ref|YP_007490355.1| - 0.00035 21.1 20.6 0.074 13.6 5.7 2.8 2 1 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_17 PF13534.6 gi|452210241|ref|YP_007490355.1| - 0.00094 19.7 17.3 0.035 14.7 3.4 2.4 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|452210241|ref|YP_007490355.1| - 0.0037 17.4 16.3 0.3 11.3 4.9 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain DUF2330 PF10092.9 gi|452210241|ref|YP_007490355.1| - 0.026 13.6 0.0 0.033 13.3 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2330) Fer4_15 PF13459.6 gi|452210241|ref|YP_007490355.1| - 0.96 10.2 23.9 0.27 12.0 7.6 3.2 1 1 2 3 3 3 0 4Fe-4S single cluster domain DUF4434 PF14488.6 gi|452210242|ref|YP_007490356.1| - 0.061 13.3 0.1 0.47 10.4 0.1 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4434) Glycos_transf_2 PF00535.26 gi|452210243|ref|YP_007490357.1| - 1.3e-33 116.2 0.0 3.3e-33 114.9 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|452210243|ref|YP_007490357.1| - 1.7e-24 87.0 0.0 2.7e-24 86.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|452210243|ref|YP_007490357.1| - 1e-20 74.5 0.8 2.4e-20 73.3 0.8 1.7 1 1 0 1 1 1 1 Glycosyl transferase family group 2 DUF2334 PF10096.9 gi|452210243|ref|YP_007490357.1| - 6.7e-13 48.8 0.0 3.7e-09 36.5 0.0 2.6 2 0 0 2 2 2 2 Uncharacterized protein conserved in bacteria (DUF2334) Glyco_tranf_2_2 PF10111.9 gi|452210243|ref|YP_007490357.1| - 6.9e-08 32.3 0.1 1.2e-07 31.6 0.1 1.5 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 gi|452210243|ref|YP_007490357.1| - 4e-07 29.7 0.0 7.8e-07 28.7 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 21 Polysacc_deac_1 PF01522.21 gi|452210243|ref|YP_007490357.1| - 0.00064 19.6 0.0 0.0026 17.7 0.0 2.1 3 0 0 3 3 3 1 Polysaccharide deacetylase Glyco_tranf_2_4 PF13704.6 gi|452210243|ref|YP_007490357.1| - 0.0012 19.3 0.0 0.0051 17.3 0.0 2.1 2 0 0 2 2 2 1 Glycosyl transferase family 2 DUF2207 PF09972.9 gi|452210243|ref|YP_007490357.1| - 0.99 8.1 4.9 4 6.1 3.1 2.6 3 0 0 3 3 3 0 Predicted membrane protein (DUF2207) SWIM PF04434.17 gi|452210244|ref|YP_007490358.1| - 0.0056 16.3 0.4 0.011 15.4 0.4 1.4 1 0 0 1 1 1 1 SWIM zinc finger FANCI_S1-cap PF14674.6 gi|452210244|ref|YP_007490358.1| - 0.0095 16.0 0.1 0.051 13.7 0.1 2.3 1 0 0 1 1 1 1 FANCI solenoid 1 cap PUA PF01472.20 gi|452210244|ref|YP_007490358.1| - 0.035 14.1 0.1 0.096 12.7 0.1 1.7 1 0 0 1 1 1 0 PUA domain 4HB_MCP_1 PF12729.7 gi|452210244|ref|YP_007490358.1| - 0.25 10.9 6.1 0.21 11.1 3.2 2.4 2 0 0 2 2 2 0 Four helix bundle sensory module for signal transduction AAA_33 PF13671.6 gi|452210245|ref|YP_007490359.1| - 2.2e-13 50.6 0.0 7.1e-13 48.9 0.0 1.8 2 0 0 2 2 2 1 AAA domain Metallophos PF00149.28 gi|452210245|ref|YP_007490359.1| - 7.3e-08 33.1 0.1 1.1e-07 32.6 0.1 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase KTI12 PF08433.10 gi|452210245|ref|YP_007490359.1| - 0.0014 18.2 0.0 0.0026 17.2 0.0 1.4 1 0 0 1 1 1 1 Chromatin associated protein KTI12 MCPsignal PF00015.21 gi|452210246|ref|YP_007490360.1| - 1.1e-22 80.6 46.0 3.5e-20 72.5 21.0 5.1 2 1 2 4 4 4 3 Methyl-accepting chemotaxis protein (MCP) signalling domain PAS_3 PF08447.12 gi|452210246|ref|YP_007490360.1| - 9e-19 67.6 0.0 5.3e-18 65.1 0.0 2.4 2 0 0 2 2 1 1 PAS fold PAS_9 PF13426.7 gi|452210246|ref|YP_007490360.1| - 1.5e-16 60.6 0.0 9.9e-07 29.0 0.0 2.7 2 0 0 2 2 2 2 PAS domain PAS_4 PF08448.10 gi|452210246|ref|YP_007490360.1| - 1.1e-14 54.6 0.0 3e-08 33.9 0.0 2.7 2 0 0 2 2 2 2 PAS fold PAS PF00989.25 gi|452210246|ref|YP_007490360.1| - 4.7e-13 49.1 0.0 2.4e-07 30.8 0.0 2.8 2 0 0 2 2 2 2 PAS fold DUF948 PF06103.11 gi|452210246|ref|YP_007490360.1| - 6.9e-06 26.2 29.5 0.032 14.5 1.7 5.2 2 2 3 5 5 5 3 Bacterial protein of unknown function (DUF948) HAMP PF00672.25 gi|452210246|ref|YP_007490360.1| - 0.0054 17.1 1.4 2.3 8.7 0.0 4.4 5 0 0 5 5 4 1 HAMP domain PAS_10 PF13596.6 gi|452210246|ref|YP_007490360.1| - 0.014 16.0 0.2 1.3 9.7 0.0 3.4 3 0 0 3 3 3 0 PAS domain Sigma70_ner PF04546.13 gi|452210246|ref|YP_007490360.1| - 0.035 14.0 17.6 0.45 10.4 7.8 2.8 2 1 0 2 2 2 0 Sigma-70, non-essential region PAS_8 PF13188.7 gi|452210246|ref|YP_007490360.1| - 0.052 13.6 0.0 1.7 8.7 0.0 2.6 2 0 0 2 2 2 0 PAS domain Vps53_N PF04100.12 gi|452210246|ref|YP_007490360.1| - 0.13 11.2 28.1 0.66 8.9 3.6 3.9 4 1 1 5 5 5 0 Vps53-like, N-terminal ENTH PF01417.20 gi|452210246|ref|YP_007490360.1| - 0.2 11.7 2.9 0.48 10.5 0.2 2.7 2 1 0 2 2 2 0 ENTH domain Abi_C PF14355.6 gi|452210246|ref|YP_007490360.1| - 0.24 11.5 8.3 1.2 9.3 0.3 4.7 4 1 1 5 5 5 0 Abortive infection C-terminus BSP PF04450.12 gi|452210246|ref|YP_007490360.1| - 0.3 10.8 4.7 2.7 7.7 0.1 2.6 2 0 0 2 2 2 0 Peptidase of plants and bacteria DUF1664 PF07889.12 gi|452210246|ref|YP_007490360.1| - 0.41 10.7 26.5 0.88 9.6 0.1 5.1 2 2 3 5 5 5 0 Protein of unknown function (DUF1664) MMR_HSR1_C PF08438.10 gi|452210246|ref|YP_007490360.1| - 0.68 10.5 8.7 0.57 10.8 3.7 3.2 3 0 0 3 3 3 0 GTPase of unknown function C-terminal Laminin_II PF06009.12 gi|452210246|ref|YP_007490360.1| - 1.2 9.1 31.3 0.46 10.5 4.0 4.7 2 2 1 4 4 4 0 Laminin Domain II FUSC PF04632.12 gi|452210246|ref|YP_007490360.1| - 1.5 7.2 4.9 0.62 8.5 0.6 1.9 1 1 1 2 2 2 0 Fusaric acid resistance protein family Spc7 PF08317.11 gi|452210246|ref|YP_007490360.1| - 1.6 7.5 25.0 0.38 9.6 4.2 2.5 1 1 0 2 2 2 0 Spc7 kinetochore protein Imm7 PF15585.6 gi|452210246|ref|YP_007490360.1| - 2 8.7 5.6 14 6.0 0.9 3.6 2 2 1 3 3 3 0 Immunity protein 7 CorA PF01544.18 gi|452210246|ref|YP_007490360.1| - 2.4 7.4 13.1 1.5 8.0 0.2 3.5 1 1 2 3 3 3 0 CorA-like Mg2+ transporter protein Ufd2P_core PF10408.9 gi|452210246|ref|YP_007490360.1| - 5.5 5.5 13.7 1.7 7.1 3.0 2.5 2 1 0 2 2 2 0 Ubiquitin elongating factor core Zn_Tnp_IS1 PF03811.13 gi|452210248|ref|YP_007490362.1| - 0.063 13.0 0.0 0.098 12.4 0.0 1.4 1 1 0 1 1 1 0 InsA N-terminal domain MgtE PF01769.16 gi|452210249|ref|YP_007490363.1| - 6.8e-26 91.1 7.6 6.8e-26 91.1 7.6 1.7 2 0 0 2 2 2 1 Divalent cation transporter MgtE_N PF03448.17 gi|452210249|ref|YP_007490363.1| - 3.8e-23 82.0 1.2 1.6e-22 80.0 0.3 2.2 2 0 0 2 2 2 1 MgtE intracellular N domain CBS PF00571.28 gi|452210249|ref|YP_007490363.1| - 8.8e-05 22.9 0.1 0.086 13.3 0.2 2.8 2 0 0 2 2 2 2 CBS domain IncE PF17627.2 gi|452210249|ref|YP_007490363.1| - 0.38 10.8 3.2 0.73 9.9 3.2 1.4 1 0 0 1 1 1 0 Inclusion membrane protein E N6_Mtase PF02384.16 gi|452210250|ref|YP_007490364.1| - 7.7e-70 235.6 0.0 1.1e-69 235.1 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.8 gi|452210250|ref|YP_007490364.1| - 1.1e-14 55.3 0.1 8.4e-14 52.4 0.0 2.5 2 1 0 2 2 2 1 HsdM N-terminal domain UPF0020 PF01170.18 gi|452210250|ref|YP_007490364.1| - 7.6e-05 22.5 0.1 0.0014 18.3 0.1 2.7 2 1 0 2 2 2 1 Putative RNA methylase family UPF0020 MTS PF05175.14 gi|452210250|ref|YP_007490364.1| - 0.013 15.0 0.0 0.46 10.0 0.0 2.6 2 1 1 3 3 3 0 Methyltransferase small domain PocR PF10114.9 gi|452210252|ref|YP_007490366.1| - 7.7e-47 159.1 0.0 2.7e-46 157.3 0.0 2.0 2 0 0 2 2 2 1 Sensory domain found in PocR PAS_3 PF08447.12 gi|452210252|ref|YP_007490366.1| - 1.1e-32 112.1 2.5 9.9e-16 57.8 0.1 3.9 3 0 0 3 3 3 3 PAS fold HisKA_2 PF07568.12 gi|452210252|ref|YP_007490366.1| - 7.1e-32 109.3 1.0 7.1e-32 109.3 1.0 2.3 2 0 0 2 2 2 1 Histidine kinase PAS_9 PF13426.7 gi|452210252|ref|YP_007490366.1| - 4.8e-20 71.7 0.8 1.2e-14 54.5 0.0 3.7 3 1 0 3 3 3 2 PAS domain PAS PF00989.25 gi|452210252|ref|YP_007490366.1| - 3.3e-19 69.0 0.0 4.5e-14 52.4 0.0 3.7 3 0 0 3 3 3 2 PAS fold PAS_4 PF08448.10 gi|452210252|ref|YP_007490366.1| - 2.3e-18 66.5 0.0 2e-11 44.1 0.0 3.5 3 0 0 3 3 3 2 PAS fold PAS_8 PF13188.7 gi|452210252|ref|YP_007490366.1| - 3.8e-06 26.8 0.0 1.2e-05 25.2 0.0 1.8 1 0 0 1 1 1 1 PAS domain HWE_HK PF07536.14 gi|452210252|ref|YP_007490366.1| - 0.0015 19.2 0.8 0.0037 17.9 0.1 2.0 2 0 0 2 2 2 1 HWE histidine kinase Pro_Al_protease PF02983.14 gi|452210252|ref|YP_007490366.1| - 0.11 12.6 2.7 0.18 11.9 0.0 2.5 3 0 0 3 3 3 0 Alpha-lytic protease prodomain DUF2564 PF10819.8 gi|452210252|ref|YP_007490366.1| - 0.17 12.3 1.6 0.78 10.2 1.7 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF2564) DUF3268 PF11672.8 gi|452210252|ref|YP_007490366.1| - 0.19 12.1 0.0 0.91 9.9 0.0 2.2 2 0 0 2 2 2 0 zinc-finger-containing domain RRF PF01765.19 gi|452210252|ref|YP_007490366.1| - 0.42 10.6 7.1 5.1 7.0 1.3 2.4 2 0 0 2 2 2 0 Ribosome recycling factor OmpH PF03938.14 gi|452210252|ref|YP_007490366.1| - 0.65 10.3 6.0 5.3 7.4 0.4 3.0 3 0 0 3 3 3 0 Outer membrane protein (OmpH-like) FAM25 PF15825.5 gi|452210252|ref|YP_007490366.1| - 3.4 8.1 5.7 1.8 9.0 0.6 2.9 3 0 0 3 3 3 0 FAM25 family Methyltransf_11 PF08241.12 gi|452210253|ref|YP_007490367.1| - 1.6e-15 57.5 0.0 2.9e-15 56.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|452210253|ref|YP_007490367.1| - 1.4e-08 35.3 0.0 2.6e-08 34.4 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|452210253|ref|YP_007490367.1| - 0.00031 20.6 0.0 0.00045 20.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|452210253|ref|YP_007490367.1| - 0.00072 19.0 0.0 0.00086 18.7 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|452210253|ref|YP_007490367.1| - 0.0037 18.0 0.0 0.0068 17.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|452210253|ref|YP_007490367.1| - 0.021 14.7 0.0 0.03 14.2 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_8 PF05148.15 gi|452210253|ref|YP_007490367.1| - 0.066 13.1 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 Hypothetical methyltransferase CMAS PF02353.20 gi|452210253|ref|YP_007490367.1| - 0.14 11.4 0.1 0.28 10.4 0.0 1.5 2 0 0 2 2 2 0 Mycolic acid cyclopropane synthetase Mac PF12464.8 gi|452210254|ref|YP_007490368.1| - 4.9e-16 58.7 0.2 8.3e-16 58.0 0.2 1.3 1 0 0 1 1 1 1 Maltose acetyltransferase Hexapep PF00132.24 gi|452210254|ref|YP_007490368.1| - 7.2e-13 47.7 13.6 3.9e-10 39.1 5.6 3.1 2 1 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|452210254|ref|YP_007490368.1| - 4.1e-10 39.2 11.0 1e-09 38.0 4.2 2.7 3 0 0 3 3 3 2 Hexapeptide repeat of succinyl-transferase Integrase_DNA PF02920.15 gi|452210257|ref|YP_007490371.1| - 0.12 12.0 0.3 5.6 6.8 0.1 2.1 1 1 1 2 2 2 0 DNA binding domain of tn916 integrase Ala_racemase_N PF01168.20 gi|452210258|ref|YP_007490372.1| - 1.1e-26 93.8 0.0 1.4e-26 93.5 0.0 1.0 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain Uteroglobin PF01099.17 gi|452210258|ref|YP_007490372.1| - 0.08 13.3 0.0 0.22 11.9 0.0 1.7 1 0 0 1 1 1 0 Uteroglobin family Lactamase_B PF00753.27 gi|452210259|ref|YP_007490373.1| - 1.4e-09 38.3 1.0 4.5e-09 36.6 1.0 1.9 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|452210259|ref|YP_007490373.1| - 0.00017 21.1 0.7 0.00027 20.5 0.0 1.7 2 0 0 2 2 2 1 Beta-lactamase superfamily domain NdhS PF11623.8 gi|452210259|ref|YP_007490373.1| - 0.067 12.9 0.0 0.17 11.6 0.0 1.7 1 0 0 1 1 1 0 NAD(P)H dehydrogenase subunit S DNA_pol3_delta PF06144.13 gi|452210259|ref|YP_007490373.1| - 0.15 11.8 0.1 0.28 11.0 0.1 1.3 1 0 0 1 1 1 0 DNA polymerase III, delta subunit Lactonase PF10282.9 gi|452210260|ref|YP_007490374.1| - 1e-16 61.2 9.4 2.5e-06 27.0 0.7 4.4 2 1 1 4 4 4 3 Lactonase, 7-bladed beta-propeller PKD PF00801.20 gi|452210260|ref|YP_007490374.1| - 1.6e-10 40.7 1.8 6.8e-10 38.6 1.8 2.2 1 0 0 1 1 1 1 PKD domain Cytochrom_D1 PF02239.16 gi|452210260|ref|YP_007490374.1| - 7.2e-10 37.9 12.5 2.6e-05 22.9 0.4 4.0 3 2 1 4 4 4 3 Cytochrome D1 heme domain NHL PF01436.21 gi|452210260|ref|YP_007490374.1| - 1.8e-09 37.2 18.6 0.33 11.1 0.0 6.9 6 0 0 6 6 6 5 NHL repeat Inhibitor_I42 PF09394.10 gi|452210260|ref|YP_007490374.1| - 2.4e-09 37.5 0.0 1.2e-08 35.3 0.0 2.2 1 0 0 1 1 1 1 Chagasin family peptidase inhibitor I42 PD40 PF07676.12 gi|452210260|ref|YP_007490374.1| - 2.3e-07 30.5 15.7 2.5 8.1 0.0 9.2 8 1 0 8 8 8 3 WD40-like Beta Propeller Repeat PGF-CTERM PF18204.1 gi|452210260|ref|YP_007490374.1| - 3.6e-05 23.6 0.3 7.3e-05 22.6 0.3 1.5 1 0 0 1 1 1 1 PGF-CTERM motif Arm-DNA-bind_3 PF13356.6 gi|452210260|ref|YP_007490374.1| - 0.00074 19.8 0.0 7.2 7.1 0.0 4.4 1 1 1 2 2 2 1 Arm DNA-binding domain Arylesterase PF01731.20 gi|452210260|ref|YP_007490374.1| - 0.00091 19.4 22.0 1.4 9.2 0.1 7.5 3 2 5 8 8 8 2 Arylesterase ANAPC4_WD40 PF12894.7 gi|452210260|ref|YP_007490374.1| - 0.038 14.3 2.6 7.4 6.9 0.0 4.6 3 2 2 5 5 5 0 Anaphase-promoting complex subunit 4 WD40 domain DEDD_Tnp_IS110 PF01548.17 gi|452210261|ref|YP_007490375.1| - 1.8e-20 73.4 0.2 2.2e-20 73.1 0.2 1.1 1 0 0 1 1 1 1 Transposase Orthopox_F14 PF06076.12 gi|452210261|ref|YP_007490375.1| - 0.0095 16.2 0.0 0.019 15.2 0.0 1.5 1 0 0 1 1 1 1 Orthopoxvirus F14 protein TP_methylase PF00590.20 gi|452210262|ref|YP_007490376.1| - 2e-21 76.9 0.1 3.4e-20 72.9 0.1 2.0 1 1 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases CbiD PF01888.17 gi|452210263|ref|YP_007490377.1| - 1.1e-51 175.6 0.4 1.9e-51 174.8 0.4 1.4 1 0 0 1 1 1 1 CbiD sCache_like PF16736.5 gi|452210263|ref|YP_007490377.1| - 0.1 12.7 0.1 0.37 10.9 0.0 2.0 3 0 0 3 3 3 0 Single Cache-like DNA_mis_repair PF01119.19 gi|452210264|ref|YP_007490378.1| - 1.4e-37 127.9 0.0 2.8e-37 127.0 0.0 1.5 1 0 0 1 1 1 1 DNA mismatch repair protein, C-terminal domain MutL_C PF08676.11 gi|452210264|ref|YP_007490378.1| - 9.5e-34 116.3 0.0 2.3e-33 115.1 0.0 1.6 1 0 0 1 1 1 1 MutL C terminal dimerisation domain HATPase_c_3 PF13589.6 gi|452210264|ref|YP_007490378.1| - 1.2e-13 51.1 0.1 3.1e-13 49.7 0.1 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 gi|452210264|ref|YP_007490378.1| - 7e-08 33.0 0.1 1.5e-07 31.9 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PP2C_C PF07830.13 gi|452210264|ref|YP_007490378.1| - 2.4 8.7 11.1 0.5 10.9 4.0 2.8 2 0 0 2 2 2 0 Protein serine/threonine phosphatase 2C, C-terminal domain MutS_V PF00488.21 gi|452210265|ref|YP_007490379.1| - 2.3e-85 285.4 0.6 4.5e-85 284.4 0.1 1.8 2 0 0 2 2 2 1 MutS domain V MutS_I PF01624.20 gi|452210265|ref|YP_007490379.1| - 1.9e-44 150.5 0.0 5.8e-44 148.9 0.0 1.9 2 0 0 2 2 2 1 MutS domain I MutS_III PF05192.18 gi|452210265|ref|YP_007490379.1| - 5.8e-43 147.4 0.2 1.3e-42 146.2 0.2 1.6 1 0 0 1 1 1 1 MutS domain III MutS_IV PF05190.18 gi|452210265|ref|YP_007490379.1| - 3.9e-32 110.5 0.4 1.2e-31 108.9 0.4 1.9 1 0 0 1 1 1 1 MutS family domain IV MutS_II PF05188.17 gi|452210265|ref|YP_007490379.1| - 1.1e-22 80.8 0.0 4.7e-22 78.8 0.0 2.2 2 0 0 2 2 2 1 MutS domain II AAA_27 PF13514.6 gi|452210265|ref|YP_007490379.1| - 0.0044 16.6 0.0 0.027 14.1 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|452210265|ref|YP_007490379.1| - 0.063 13.0 0.0 0.16 11.7 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_14 PF13173.6 gi|452210265|ref|YP_007490379.1| - 0.11 12.5 0.0 0.37 10.8 0.0 2.0 1 0 0 1 1 1 0 AAA domain Acyl_transf_3 PF01757.22 gi|452210266|ref|YP_007490380.1| - 1.2e-25 90.3 34.6 2.1e-25 89.5 34.6 1.4 1 1 0 1 1 1 1 Acyltransferase family SCFA_trans PF02667.14 gi|452210266|ref|YP_007490380.1| - 0.028 13.4 6.9 0.14 11.1 2.3 2.2 2 0 0 2 2 2 0 Short chain fatty acid transporter CDP-OH_P_transf PF01066.21 gi|452210267|ref|YP_007490381.1| - 7.1e-08 33.1 0.3 7.1e-08 33.1 0.3 2.3 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase GerA PF03323.13 gi|452210267|ref|YP_007490381.1| - 0.27 9.6 1.0 0.36 9.2 1.0 1.1 1 0 0 1 1 1 0 Bacillus/Clostridium GerA spore germination protein CCG PF02754.16 gi|452210269|ref|YP_007490383.1| - 2.1e-30 104.8 2.5 2.7e-14 53.1 0.2 2.4 2 0 0 2 2 2 2 Cysteine-rich domain Fer4_10 PF13237.6 gi|452210269|ref|YP_007490383.1| - 2.5e-06 27.5 17.1 2.5e-05 24.3 9.3 3.5 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|452210269|ref|YP_007490383.1| - 9.3e-06 26.0 5.5 9.3e-06 26.0 5.5 2.5 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|452210269|ref|YP_007490383.1| - 3.7e-05 24.2 7.8 3.7e-05 24.2 7.8 3.1 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|452210269|ref|YP_007490383.1| - 0.00023 20.8 11.2 0.004 16.9 3.2 3.7 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|452210269|ref|YP_007490383.1| - 0.00063 20.6 12.3 0.0067 17.3 0.1 3.2 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|452210269|ref|YP_007490383.1| - 0.0015 18.7 20.2 0.0017 18.5 11.9 3.9 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452210269|ref|YP_007490383.1| - 0.0016 18.4 11.0 0.0056 16.7 1.4 3.8 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|452210269|ref|YP_007490383.1| - 0.002 18.7 16.0 0.0076 16.8 12.1 3.2 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|452210269|ref|YP_007490383.1| - 0.0022 18.0 9.6 0.011 15.8 1.2 3.9 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|452210269|ref|YP_007490383.1| - 0.0091 16.4 0.6 0.0091 16.4 0.6 3.8 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|452210269|ref|YP_007490383.1| - 0.019 15.5 8.5 0.3 11.6 0.0 3.0 3 0 0 3 3 2 0 4Fe-4S single cluster domain of Ferredoxin I SpoOE-like PF09388.10 gi|452210269|ref|YP_007490383.1| - 0.071 13.0 0.4 0.18 11.7 0.0 1.8 2 0 0 2 2 2 0 Spo0E like sporulation regulatory protein Fer4_15 PF13459.6 gi|452210269|ref|YP_007490383.1| - 0.27 12.0 10.8 0.74 10.6 0.8 3.5 4 0 0 4 4 3 0 4Fe-4S single cluster domain DUF2151 PF10221.9 gi|452210269|ref|YP_007490383.1| - 0.31 9.6 0.0 0.44 9.1 0.0 1.1 1 0 0 1 1 1 0 Cell cycle and development regulator Fer4_18 PF13746.6 gi|452210269|ref|YP_007490383.1| - 0.32 11.2 9.9 0.9 9.8 0.2 2.8 3 0 0 3 3 2 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|452210269|ref|YP_007490383.1| - 2.2 8.5 20.2 0.59 10.3 12.4 3.3 3 1 0 3 3 3 0 4Fe-4S dicluster domain B12-binding PF02310.19 gi|452210270|ref|YP_007490384.1| - 2.8e-26 92.0 0.3 3.4e-26 91.7 0.3 1.1 1 0 0 1 1 1 1 B12 binding domain MTTB PF06253.11 gi|452210271|ref|YP_007490385.1| - 5.2e-58 196.3 0.0 6.2e-58 196.0 0.0 1.0 1 0 0 1 1 1 1 Trimethylamine methyltransferase (MTTB) B5 PF03484.15 gi|452210271|ref|YP_007490385.1| - 0.16 12.3 0.0 0.42 11.0 0.0 1.8 1 0 0 1 1 1 0 tRNA synthetase B5 domain B12-binding PF02310.19 gi|452210272|ref|YP_007490386.1| - 3.5e-23 81.9 0.4 6.4e-23 81.1 0.4 1.4 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|452210272|ref|YP_007490386.1| - 1.1e-19 70.6 2.0 1.1e-19 70.6 2.0 2.2 3 0 0 3 3 3 1 B12 binding domain EamA PF00892.20 gi|452210273|ref|YP_007490387.1| - 8.1e-14 52.0 47.1 1e-06 29.0 17.8 3.3 3 1 0 3 3 3 3 EamA-like transporter family SepZ PF06066.11 gi|452210273|ref|YP_007490387.1| - 8 6.8 9.3 12 6.2 2.2 3.1 2 2 1 3 3 3 0 SepZ ATP-synt_Z PF16594.5 gi|452210275|ref|YP_007490389.1| - 0.014 14.8 1.0 0.016 14.6 1.0 1.3 1 0 0 1 1 1 0 Putative AtpZ or ATP-synthase-associated Dimeth_Pyl PF09505.10 gi|452210276|ref|YP_007490390.1| - 4.2e-25 88.2 0.2 4.6e-25 88.1 0.2 1.0 1 0 0 1 1 1 1 Dimethylamine methyltransferase (Dimeth_PyL) PepSY PF03413.19 gi|452210277|ref|YP_007490391.1| - 6e-25 87.6 5.9 1.3e-13 51.3 0.3 2.3 2 0 0 2 2 2 2 Peptidase propeptide and YPEB domain DUF5006 PF16397.5 gi|452210277|ref|YP_007490391.1| - 0.0037 16.5 0.0 0.0082 15.4 0.0 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF5006) PepSY_2 PF13670.6 gi|452210277|ref|YP_007490391.1| - 0.016 15.2 3.6 1.2 9.2 0.6 3.3 2 2 1 3 3 3 0 Peptidase propeptide and YPEB domain PEARLI-4 PF05278.12 gi|452210279|ref|YP_007490393.1| - 2.9 7.4 10.7 3 7.3 10.7 1.0 1 0 0 1 1 1 0 Arabidopsis phospholipase-like protein (PEARLI 4) tRNA-synt_1f PF01921.18 gi|452210280|ref|YP_007490394.1| - 2.8e-131 437.7 0.0 3.5e-131 437.4 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (K) tRNA-synt_1g PF09334.11 gi|452210280|ref|YP_007490394.1| - 1.5e-09 37.1 0.0 0.00035 19.4 0.0 2.5 2 0 0 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|452210280|ref|YP_007490394.1| - 1.4e-05 24.6 0.0 0.11 11.8 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain HypA PF01155.19 gi|452210280|ref|YP_007490394.1| - 0.095 12.7 0.0 0.53 10.3 0.0 2.2 2 1 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Methyltransf_11 PF08241.12 gi|452210281|ref|YP_007490395.1| - 1.9e-16 60.5 0.0 3.2e-16 59.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|452210281|ref|YP_007490395.1| - 7e-15 55.5 0.0 1.6e-14 54.4 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|452210281|ref|YP_007490395.1| - 1.6e-11 44.3 0.0 2.2e-11 43.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|452210281|ref|YP_007490395.1| - 6.1e-08 33.3 0.0 1.1e-07 32.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|452210281|ref|YP_007490395.1| - 3e-06 27.1 0.0 4e-06 26.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|452210281|ref|YP_007490395.1| - 0.0006 19.2 0.0 0.0015 17.9 0.0 1.6 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family MetW PF07021.12 gi|452210281|ref|YP_007490395.1| - 0.12 11.9 0.0 0.18 11.4 0.0 1.4 1 1 0 1 1 1 0 Methionine biosynthesis protein MetW MTS PF05175.14 gi|452210281|ref|YP_007490395.1| - 0.2 11.2 0.0 0.3 10.6 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain BofA PF07441.11 gi|452210282|ref|YP_007490396.1| - 9.4e-11 41.8 21.0 1.2e-10 41.4 21.0 1.2 1 0 0 1 1 1 1 SigmaK-factor processing regulatory protein BofA Nuc_deoxyrib_tr PF05014.15 gi|452210283|ref|YP_007490397.1| - 4.2e-07 30.0 0.0 4.9e-07 29.8 0.0 1.1 1 0 0 1 1 1 1 Nucleoside 2-deoxyribosyltransferase BKACE PF05853.12 gi|452210283|ref|YP_007490397.1| - 0.041 13.2 0.0 0.049 12.9 0.0 1.1 1 0 0 1 1 1 0 beta-keto acid cleavage enzyme Nuc_deoxyri_tr2 PF15891.5 gi|452210283|ref|YP_007490397.1| - 0.13 12.6 0.0 0.18 12.1 0.0 1.3 1 0 0 1 1 1 0 Nucleoside 2-deoxyribosyltransferase like Peptidase_U32 PF01136.19 gi|452210284|ref|YP_007490398.1| - 5.3e-126 418.5 0.0 1.8e-84 282.6 0.0 2.2 2 0 0 2 2 2 2 Peptidase family U32 DUF3656 PF12392.8 gi|452210284|ref|YP_007490398.1| - 4.9e-28 97.9 0.3 2.3e-26 92.5 0.4 2.5 2 0 0 2 2 2 1 Collagenase Dus PF01207.17 gi|452210284|ref|YP_007490398.1| - 0.036 13.2 0.0 5.8 5.9 0.0 3.6 4 0 0 4 4 4 0 Dihydrouridine synthase (Dus) NAD_binding_10 PF13460.6 gi|452210285|ref|YP_007490399.1| - 2.9e-12 46.9 0.0 5.1e-12 46.1 0.0 1.5 2 0 0 2 2 2 1 NAD(P)H-binding NmrA PF05368.13 gi|452210285|ref|YP_007490399.1| - 1e-11 44.8 0.0 1.7e-11 44.2 0.0 1.3 1 0 0 1 1 1 1 NmrA-like family Epimerase PF01370.21 gi|452210285|ref|YP_007490399.1| - 1.7e-05 24.4 0.0 3e-05 23.6 0.0 1.5 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|452210285|ref|YP_007490399.1| - 0.0045 16.4 0.1 0.0073 15.7 0.1 1.3 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase TrkA_N PF02254.18 gi|452210285|ref|YP_007490399.1| - 0.025 14.8 0.1 0.053 13.8 0.1 1.4 1 0 0 1 1 1 0 TrkA-N domain GPAT_N PF14829.6 gi|452210285|ref|YP_007490399.1| - 0.028 14.4 0.0 0.085 12.9 0.0 1.7 2 0 0 2 2 2 0 Glycerol-3-phosphate acyltransferase N-terminal PAC2 PF09754.9 gi|452210285|ref|YP_007490399.1| - 0.14 12.2 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 PAC2 family ApbA PF02558.16 gi|452210285|ref|YP_007490399.1| - 0.14 11.8 0.0 0.24 11.0 0.0 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA AtuA PF07287.11 gi|452210285|ref|YP_007490399.1| - 0.19 10.4 0.0 0.26 10.0 0.0 1.2 1 0 0 1 1 1 0 Acyclic terpene utilisation family protein AtuA MazG PF03819.17 gi|452210288|ref|YP_007490402.1| - 2.1e-15 56.7 0.0 2.7e-15 56.3 0.0 1.2 1 0 0 1 1 1 1 MazG nucleotide pyrophosphohydrolase domain PRA-PH PF01503.17 gi|452210288|ref|YP_007490402.1| - 0.00048 20.5 0.9 0.0011 19.3 1.0 1.6 1 1 1 2 2 2 1 Phosphoribosyl-ATP pyrophosphohydrolase MazG-like PF12643.7 gi|452210288|ref|YP_007490402.1| - 0.0032 17.7 0.0 0.0059 16.8 0.0 1.4 1 0 0 1 1 1 1 MazG-like family DUF3782 PF12644.7 gi|452210288|ref|YP_007490402.1| - 0.018 15.2 0.0 0.029 14.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3782) His_biosynth PF00977.21 gi|452210289|ref|YP_007490403.1| - 1.2e-90 303.0 0.2 1.4e-90 302.8 0.2 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein G3P_antiterm PF04309.12 gi|452210289|ref|YP_007490403.1| - 7.2e-06 25.5 0.3 0.0041 16.6 0.2 2.2 2 0 0 2 2 2 2 Glycerol-3-phosphate responsive antiterminator ThiG PF05690.14 gi|452210289|ref|YP_007490403.1| - 1.3e-05 24.7 0.2 0.097 12.0 0.1 2.2 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG NMO PF03060.15 gi|452210289|ref|YP_007490403.1| - 5.2e-05 22.8 0.1 0.09 12.1 0.0 2.2 2 0 0 2 2 2 2 Nitronate monooxygenase Dus PF01207.17 gi|452210289|ref|YP_007490403.1| - 7e-05 22.1 0.0 0.0025 16.9 0.0 2.1 2 0 0 2 2 2 1 Dihydrouridine synthase (Dus) TMP-TENI PF02581.17 gi|452210289|ref|YP_007490403.1| - 0.00018 20.9 0.1 0.16 11.3 0.0 2.3 2 0 0 2 2 2 2 Thiamine monophosphate synthase IMPDH PF00478.25 gi|452210289|ref|YP_007490403.1| - 0.00025 20.2 0.2 0.12 11.4 0.1 2.1 2 0 0 2 2 2 2 IMP dehydrogenase / GMP reductase domain DHO_dh PF01180.21 gi|452210289|ref|YP_007490403.1| - 0.00078 18.7 0.1 1 8.5 0.0 2.2 2 0 0 2 2 2 2 Dihydroorotate dehydrogenase PcrB PF01884.17 gi|452210289|ref|YP_007490403.1| - 0.02 14.4 0.3 0.053 13.0 0.1 1.8 3 0 0 3 3 3 0 PcrB family DNase-RNase PF02577.14 gi|452210290|ref|YP_007490404.1| - 2.2e-37 127.6 0.1 2.5e-37 127.4 0.1 1.1 1 0 0 1 1 1 1 Bifunctional nuclease BRE PF06113.12 gi|452210290|ref|YP_007490404.1| - 0.024 13.5 0.0 0.029 13.2 0.0 1.1 1 0 0 1 1 1 0 Brain and reproductive organ-expressed protein (BRE) PCMT PF01135.19 gi|452210291|ref|YP_007490405.1| - 3.4e-67 226.3 0.1 3.8e-67 226.1 0.1 1.0 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.6 gi|452210291|ref|YP_007490405.1| - 2.1e-08 34.1 0.0 3.9e-08 33.2 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain GCD14 PF08704.10 gi|452210291|ref|YP_007490405.1| - 1.3e-07 31.5 0.0 1.8e-07 31.1 0.0 1.2 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Fibrillarin PF01269.17 gi|452210291|ref|YP_007490405.1| - 6e-06 25.5 0.0 1e-05 24.8 0.0 1.3 1 0 0 1 1 1 1 Fibrillarin Ubie_methyltran PF01209.18 gi|452210291|ref|YP_007490405.1| - 7.9e-06 25.4 0.0 9.9e-06 25.1 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_3 PF01596.17 gi|452210291|ref|YP_007490405.1| - 9.8e-05 21.6 0.1 0.00069 18.8 0.1 1.9 2 0 0 2 2 2 1 O-methyltransferase Methyltransf_25 PF13649.6 gi|452210291|ref|YP_007490405.1| - 0.00025 21.7 0.0 0.00043 20.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltr_RsmB-F PF01189.17 gi|452210291|ref|YP_007490405.1| - 0.00066 19.4 0.0 0.0016 18.1 0.0 1.6 1 1 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltransf_23 PF13489.6 gi|452210291|ref|YP_007490405.1| - 0.0008 19.3 0.0 0.0027 17.6 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|452210291|ref|YP_007490405.1| - 0.0033 16.5 0.0 0.0044 16.1 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_11 PF08241.12 gi|452210291|ref|YP_007490405.1| - 0.0046 17.6 0.1 0.02 15.5 0.1 2.0 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_24 PF13578.6 gi|452210291|ref|YP_007490405.1| - 0.0072 17.3 0.0 0.057 14.5 0.0 2.2 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|452210291|ref|YP_007490405.1| - 0.018 14.6 0.0 0.026 14.0 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain CMAS PF02353.20 gi|452210291|ref|YP_007490405.1| - 0.027 13.8 0.0 0.037 13.3 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase ACP_syn_III_C PF08541.10 gi|452210291|ref|YP_007490405.1| - 0.11 12.7 0.0 0.2 11.9 0.0 1.4 1 0 0 1 1 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Elf1 PF05129.13 gi|452210292|ref|YP_007490406.1| - 0.032 14.3 0.4 0.069 13.2 0.4 1.5 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like DUF4625 PF15418.6 gi|452210292|ref|YP_007490406.1| - 0.042 14.1 0.1 0.081 13.2 0.1 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4625) DUF2387 PF09526.10 gi|452210292|ref|YP_007490406.1| - 0.096 12.8 0.6 0.25 11.5 0.6 1.7 1 0 0 1 1 1 0 Probable metal-binding protein (DUF2387) zinc_ribbon_4 PF13717.6 gi|452210292|ref|YP_007490406.1| - 0.12 12.4 0.4 0.29 11.1 0.4 1.7 1 0 0 1 1 1 0 zinc-ribbon domain CTP-dep_RFKase PF01982.16 gi|452210294|ref|YP_007490408.1| - 7.1e-47 158.5 0.0 1.1e-46 157.9 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF120 HxlR PF01638.17 gi|452210294|ref|YP_007490408.1| - 0.071 13.0 0.1 0.17 11.8 0.1 1.7 1 0 0 1 1 1 0 HxlR-like helix-turn-helix DHBP_synthase PF00926.19 gi|452210295|ref|YP_007490409.1| - 6.5e-60 202.0 0.0 7.9e-60 201.7 0.0 1.1 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase PEP-utilizers PF00391.23 gi|452210295|ref|YP_007490409.1| - 0.088 12.5 0.0 0.41 10.4 0.0 2.0 2 0 0 2 2 2 0 PEP-utilising enzyme, mobile domain Tho1_MOS11_C PF18592.1 gi|452210296|ref|YP_007490410.1| - 0.0041 16.9 5.0 0.0041 16.9 5.0 1.4 1 1 0 1 1 1 1 Tho1/MOS11 C-terminal domain Cation_efflux PF01545.21 gi|452210297|ref|YP_007490411.1| - 7.7e-46 156.3 12.0 9.5e-46 156.0 12.0 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|452210297|ref|YP_007490411.1| - 2.7e-21 75.5 0.6 4.7e-21 74.7 0.6 1.4 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter Intg_mem_TP0381 PF09529.10 gi|452210297|ref|YP_007490411.1| - 0.0074 15.8 0.6 0.0074 15.8 0.6 2.0 1 1 0 2 2 2 1 Integral membrane protein (intg_mem_TP0381) MLANA PF14991.6 gi|452210297|ref|YP_007490411.1| - 0.098 12.9 0.0 0.36 11.1 0.0 1.9 1 1 0 1 1 1 0 Protein melan-A Chorismate_synt PF01264.21 gi|452210298|ref|YP_007490412.1| - 1e-147 491.1 0.1 1.2e-147 490.9 0.1 1.0 1 0 0 1 1 1 1 Chorismate synthase DUF3160 PF11369.8 gi|452210299|ref|YP_007490413.1| - 3.5e-233 775.7 5.4 4.1e-233 775.4 5.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3160) ID PF18543.1 gi|452210300|ref|YP_007490414.1| - 0.034 14.2 0.5 2.6 8.1 0.0 2.7 2 1 1 3 3 3 0 Intracellular delivery domain DUF1724 PF08350.10 gi|452210302|ref|YP_007490416.1| - 8.6e-18 64.2 1.4 1.7e-17 63.3 0.4 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) HxlR PF01638.17 gi|452210302|ref|YP_007490416.1| - 0.00056 19.7 0.1 0.0015 18.4 0.1 1.7 1 1 0 1 1 1 1 HxlR-like helix-turn-helix LolA_like PF17131.4 gi|452210304|ref|YP_007490418.1| - 6.8e-13 48.8 0.2 1.2e-12 47.9 0.2 1.5 1 0 0 1 1 1 1 Outer membrane lipoprotein-sorting protein MucB_RseB PF03888.14 gi|452210304|ref|YP_007490418.1| - 2e-05 24.2 0.0 0.00011 21.8 0.0 2.0 2 0 0 2 2 2 1 MucB/RseB N-terminal domain DUF4367 PF14285.6 gi|452210304|ref|YP_007490418.1| - 3e-05 24.4 12.6 0.00015 22.2 8.7 3.2 2 1 0 2 2 2 1 Domain of unknown function (DUF4367) DUF2092 PF09865.9 gi|452210304|ref|YP_007490418.1| - 7.6e-05 22.2 0.1 0.0045 16.4 0.1 2.2 1 1 0 1 1 1 1 Predicted periplasmic protein (DUF2092) DUF1329 PF07044.11 gi|452210304|ref|YP_007490418.1| - 0.00088 18.7 0.0 0.0014 18.0 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1329) FSAP_sig_propep PF03032.15 gi|452210304|ref|YP_007490418.1| - 0.18 11.9 0.1 0.18 11.9 0.1 1.7 2 0 0 2 2 2 0 Frog skin active peptide family signal and propeptide DUF4781 PF16013.5 gi|452210305|ref|YP_007490419.1| - 0.021 13.6 0.2 0.05 12.4 0.2 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4781) DUF3852 PF12963.7 gi|452210305|ref|YP_007490419.1| - 0.027 14.8 5.1 0.27 11.6 0.1 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3852) RRG8 PF17068.5 gi|452210305|ref|YP_007490419.1| - 0.029 13.8 2.5 0.029 13.8 1.7 1.4 1 1 0 1 1 1 0 Required for respiratory growth protein 8 mitochondrial hSH3 PF14603.6 gi|452210305|ref|YP_007490419.1| - 0.1 13.0 0.9 0.27 11.7 0.6 1.8 1 1 1 2 2 2 0 Helically-extended SH3 domain SHS2_FTSA PF02491.20 gi|452210305|ref|YP_007490419.1| - 0.19 12.1 0.8 0.36 11.3 0.4 1.6 2 0 0 2 2 2 0 SHS2 domain inserted in FTSA FixS PF03597.15 gi|452210306|ref|YP_007490420.1| - 0.02 14.6 2.1 0.02 14.6 2.1 1.4 2 0 0 2 2 2 0 Cytochrome oxidase maturation protein cbb3-type DUF1724 PF08350.10 gi|452210310|ref|YP_007490424.1| - 2.9e-18 65.8 1.2 4e-18 65.3 0.4 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) DUF4375 PF14300.6 gi|452210311|ref|YP_007490425.1| - 0.17 12.1 0.2 0.3 11.3 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4375) Radical_SAM PF04055.21 gi|452210314|ref|YP_007490428.1| - 7.6e-26 91.5 0.0 1.5e-25 90.6 0.0 1.5 1 1 1 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|452210314|ref|YP_007490428.1| - 1.3e-09 38.5 0.0 2.5e-09 37.5 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|452210314|ref|YP_007490428.1| - 2.9e-06 27.4 0.0 5.7e-06 26.5 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Hydrolase_6 PF13344.6 gi|452210314|ref|YP_007490428.1| - 0.053 13.6 0.0 1.9 8.6 0.0 2.8 2 1 0 2 2 2 0 Haloacid dehalogenase-like hydrolase AP_endonuc_2 PF01261.24 gi|452210314|ref|YP_007490428.1| - 0.11 11.9 0.0 0.26 10.7 0.0 1.6 1 1 1 2 2 2 0 Xylose isomerase-like TIM barrel Y1_Tnp PF01797.16 gi|452210315|ref|YP_007490429.1| - 5.6e-39 133.0 0.8 6.3e-39 132.8 0.8 1.0 1 0 0 1 1 1 1 Transposase IS200 like Cactin_mid PF10312.9 gi|452210315|ref|YP_007490429.1| - 0.079 12.7 0.1 2.8 7.6 0.0 2.2 1 1 0 2 2 2 0 Conserved mid region of cactin DDE_Tnp_IS66 PF03050.14 gi|452210316|ref|YP_007490430.1| - 5.4e-16 58.9 0.1 5.5e-16 58.9 0.1 1.0 1 0 0 1 1 1 1 Transposase IS66 family zf-RING_5 PF14634.6 gi|452210316|ref|YP_007490430.1| - 0.077 13.0 1.5 0.14 12.2 1.5 1.6 1 1 0 1 1 1 0 zinc-RING finger domain zf-C3HC4 PF00097.25 gi|452210316|ref|YP_007490430.1| - 0.21 11.5 3.8 1 9.3 0.3 2.2 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) SPASM PF13186.6 gi|452210318|ref|YP_007490432.1| - 4.2e-10 40.0 1.8 7.2e-10 39.2 1.8 1.4 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain HTH_AsnC-type PF13404.6 gi|452210319|ref|YP_007490433.1| - 3.3e-09 36.4 0.0 6.5e-09 35.5 0.0 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|452210319|ref|YP_007490433.1| - 0.00033 20.2 2.1 0.0065 16.0 2.1 2.3 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|452210319|ref|YP_007490433.1| - 0.0069 16.4 0.1 0.011 15.8 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain AsnC_trans_reg2 PF17805.1 gi|452210319|ref|YP_007490433.1| - 0.029 14.5 0.0 0.078 13.1 0.0 1.7 2 0 0 2 2 2 0 AsnC-like ligand binding domain TrmB PF01978.19 gi|452210319|ref|YP_007490433.1| - 0.036 13.9 0.1 0.098 12.6 0.1 1.8 1 1 1 2 2 2 0 Sugar-specific transcriptional regulator TrmB LexA_DNA_bind PF01726.16 gi|452210319|ref|YP_007490433.1| - 0.11 12.3 0.1 0.24 11.2 0.1 1.5 1 1 0 1 1 1 0 LexA DNA binding domain AsnC_trans_reg2 PF17805.1 gi|452210320|ref|YP_007490434.1| - 6.6e-34 115.9 0.1 1.3e-33 115.0 0.0 1.5 2 0 0 2 2 2 1 AsnC-like ligand binding domain HTH_AsnC-type PF13404.6 gi|452210320|ref|YP_007490434.1| - 2.5e-05 24.0 0.0 5.3e-05 23.0 0.0 1.6 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|452210320|ref|YP_007490434.1| - 0.0028 17.2 0.3 0.23 11.1 0.1 2.4 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding FERM_f0 PF16511.5 gi|452210320|ref|YP_007490434.1| - 0.0065 16.8 0.0 0.01 16.1 0.0 1.4 1 0 0 1 1 1 1 N-terminal or F0 domain of Talin-head FERM AsnC_trans_reg PF01037.21 gi|452210320|ref|YP_007490434.1| - 0.014 15.4 0.0 0.27 11.2 0.0 2.2 2 0 0 2 2 2 0 Lrp/AsnC ligand binding domain DegV PF02645.16 gi|452210320|ref|YP_007490434.1| - 0.046 13.1 0.0 0.069 12.5 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein, DegV family COG1307 DDRGK PF09756.9 gi|452210320|ref|YP_007490434.1| - 0.054 13.1 0.0 0.087 12.4 0.0 1.2 1 0 0 1 1 1 0 DDRGK domain MarR_2 PF12802.7 gi|452210320|ref|YP_007490434.1| - 0.062 13.2 0.0 0.095 12.6 0.0 1.3 1 0 0 1 1 1 0 MarR family FaeA PF04703.12 gi|452210320|ref|YP_007490434.1| - 0.084 13.3 0.0 0.58 10.6 0.0 2.1 2 0 0 2 2 2 0 FaeA-like protein IF2_N PF04760.15 gi|452210320|ref|YP_007490434.1| - 0.12 12.2 0.2 0.4 10.5 0.0 2.1 2 0 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region HTH_Tnp_ISL3 PF13542.6 gi|452210320|ref|YP_007490434.1| - 0.14 11.6 0.0 0.43 10.0 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 HTH_36 PF13730.6 gi|452210320|ref|YP_007490434.1| - 0.16 12.0 0.0 0.36 10.8 0.0 1.6 2 0 0 2 2 2 0 Helix-turn-helix domain NAD_binding_7 PF13241.6 gi|452210321|ref|YP_007490435.1| - 7.5e-19 68.1 0.0 1.4e-18 67.3 0.0 1.4 1 0 0 1 1 1 1 Putative NAD(P)-binding Sacchrp_dh_NADP PF03435.18 gi|452210321|ref|YP_007490435.1| - 0.00038 20.7 0.0 0.019 15.2 0.1 2.2 1 1 1 2 2 2 1 Saccharopine dehydrogenase NADP binding domain Sirohm_synth_M PF14824.6 gi|452210321|ref|YP_007490435.1| - 0.0005 19.4 0.0 0.0011 18.4 0.0 1.6 1 0 0 1 1 1 1 Sirohaem biosynthesis protein central AlaDh_PNT_C PF01262.21 gi|452210321|ref|YP_007490435.1| - 0.066 12.5 0.1 0.11 11.7 0.1 1.4 1 1 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Shikimate_DH PF01488.20 gi|452210322|ref|YP_007490436.1| - 1.2e-42 145.3 0.2 1.2e-42 145.3 0.2 1.7 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase GlutR_N PF05201.15 gi|452210322|ref|YP_007490436.1| - 1.3e-37 128.8 0.0 2.7e-37 127.8 0.0 1.5 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, N-terminal domain GlutR_dimer PF00745.20 gi|452210322|ref|YP_007490436.1| - 1.8e-19 70.0 0.5 4.4e-19 68.7 0.5 1.7 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, dimerisation domain Sacchrp_dh_NADP PF03435.18 gi|452210322|ref|YP_007490436.1| - 3.3e-06 27.4 2.0 6e-06 26.5 0.4 2.3 2 1 0 2 2 1 1 Saccharopine dehydrogenase NADP binding domain F420_oxidored PF03807.17 gi|452210322|ref|YP_007490436.1| - 7.5e-06 26.4 0.2 2.5e-05 24.8 0.2 2.0 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 gi|452210322|ref|YP_007490436.1| - 3.5e-05 23.2 0.1 6.5e-05 22.4 0.1 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Glu_dehyd_C PF16912.5 gi|452210322|ref|YP_007490436.1| - 5.1e-05 22.9 0.3 0.0001 21.8 0.3 1.5 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus NAD_binding_7 PF13241.6 gi|452210322|ref|YP_007490436.1| - 0.0001 22.7 0.1 0.00036 20.9 0.1 2.0 2 0 0 2 2 1 1 Putative NAD(P)-binding OCD_Mu_crystall PF02423.15 gi|452210322|ref|YP_007490436.1| - 0.0046 15.9 0.1 0.0085 15.1 0.1 1.4 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family THF_DHG_CYH_C PF02882.19 gi|452210322|ref|YP_007490436.1| - 0.0063 15.8 0.1 3.5 6.9 0.0 2.9 3 0 0 3 3 3 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Pyr_redox_2 PF07992.14 gi|452210322|ref|YP_007490436.1| - 0.022 14.0 0.3 0.042 13.1 0.3 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_10 PF13460.6 gi|452210322|ref|YP_007490436.1| - 0.023 14.6 0.1 0.055 13.4 0.1 1.7 1 0 0 1 1 1 0 NAD(P)H-binding TrkA_N PF02254.18 gi|452210322|ref|YP_007490436.1| - 0.027 14.7 0.4 0.14 12.4 0.4 2.2 1 0 0 1 1 1 0 TrkA-N domain ThiF PF00899.21 gi|452210322|ref|YP_007490436.1| - 0.048 13.0 0.4 0.11 11.9 0.4 1.5 1 0 0 1 1 1 0 ThiF family adh_short PF00106.25 gi|452210322|ref|YP_007490436.1| - 0.056 12.9 0.2 0.12 11.8 0.2 1.6 1 0 0 1 1 1 0 short chain dehydrogenase ApbA PF02558.16 gi|452210322|ref|YP_007490436.1| - 0.12 12.0 0.2 0.37 10.4 0.1 1.9 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA SmpA_OmlA PF04355.13 gi|452210322|ref|YP_007490436.1| - 0.16 11.8 0.0 4.9 7.0 0.0 2.5 2 0 0 2 2 2 0 SmpA / OmlA family DUF724 PF05266.14 gi|452210322|ref|YP_007490436.1| - 0.28 11.0 2.7 0.58 10.0 2.7 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF724) ALAD PF00490.21 gi|452210323|ref|YP_007490437.1| - 3.1e-136 453.7 0.1 4.4e-136 453.2 0.1 1.2 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase Aminotran_3 PF00202.21 gi|452210324|ref|YP_007490438.1| - 5.9e-64 216.2 0.0 7.5e-64 215.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Porphobil_deam PF01379.20 gi|452210325|ref|YP_007490439.1| - 2.3e-66 223.2 0.0 2.9e-66 222.9 0.0 1.1 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.15 gi|452210325|ref|YP_007490439.1| - 9.5e-13 48.3 0.1 2.5e-12 47.0 0.1 1.7 1 0 0 1 1 1 1 Porphobilinogen deaminase, C-terminal domain DHO_dh PF01180.21 gi|452210326|ref|YP_007490440.1| - 6e-65 219.4 0.1 6.9e-65 219.2 0.1 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase Dus PF01207.17 gi|452210326|ref|YP_007490440.1| - 3.7e-11 42.7 0.2 6.6e-10 38.6 0.2 2.0 1 1 0 1 1 1 1 Dihydrouridine synthase (Dus) His_biosynth PF00977.21 gi|452210326|ref|YP_007490440.1| - 0.00014 21.4 0.6 0.00029 20.4 0.1 1.7 2 0 0 2 2 2 1 Histidine biosynthesis protein NMO PF03060.15 gi|452210326|ref|YP_007490440.1| - 0.00044 19.7 6.7 0.00044 19.7 6.7 1.7 2 1 0 2 2 2 1 Nitronate monooxygenase DUF561 PF04481.12 gi|452210326|ref|YP_007490440.1| - 0.043 13.0 0.4 0.083 12.0 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF561) NanE PF04131.14 gi|452210326|ref|YP_007490440.1| - 0.096 11.9 0.7 0.21 10.7 0.1 1.8 1 1 1 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase G3P_antiterm PF04309.12 gi|452210326|ref|YP_007490440.1| - 0.12 11.8 0.5 2.2 7.7 0.1 2.3 2 0 0 2 2 2 0 Glycerol-3-phosphate responsive antiterminator IMPDH PF00478.25 gi|452210326|ref|YP_007490440.1| - 2.9 6.8 9.7 0.69 8.8 6.2 1.8 2 1 1 3 3 3 0 IMP dehydrogenase / GMP reductase domain DHODB_Fe-S_bind PF10418.9 gi|452210327|ref|YP_007490441.1| - 7.7e-12 44.8 4.7 1.6e-11 43.8 4.4 1.7 2 0 0 2 2 2 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B NAD_binding_1 PF00175.21 gi|452210327|ref|YP_007490441.1| - 2.2e-07 31.5 0.0 5.2e-07 30.3 0.0 1.7 1 1 0 1 1 1 1 Oxidoreductase NAD-binding domain LAMTOR5 PF16672.5 gi|452210327|ref|YP_007490441.1| - 0.049 13.6 0.2 0.1 12.6 0.2 1.5 1 0 0 1 1 1 0 Ragulator complex protein LAMTOR5 FAD_binding_6 PF00970.24 gi|452210327|ref|YP_007490441.1| - 0.13 12.7 0.0 1.1 9.7 0.0 2.2 1 1 0 1 1 1 0 Oxidoreductase FAD-binding domain FAA_hydrolase PF01557.18 gi|452210328|ref|YP_007490442.1| - 1.6e-71 240.4 0.0 2e-71 240.1 0.0 1.1 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family DUF2437 PF10370.9 gi|452210328|ref|YP_007490442.1| - 0.0096 16.8 0.0 0.022 15.6 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF2437) HTH_5 PF01022.20 gi|452210329|ref|YP_007490443.1| - 0.0084 16.0 0.2 0.019 14.8 0.2 1.6 1 1 0 1 1 1 1 Bacterial regulatory protein, arsR family RepL PF05732.11 gi|452210329|ref|YP_007490443.1| - 0.0097 15.4 0.1 0.024 14.1 0.1 1.8 1 1 0 1 1 1 1 Firmicute plasmid replication protein (RepL) TrmB PF01978.19 gi|452210329|ref|YP_007490443.1| - 0.011 15.6 0.1 0.02 14.8 0.1 1.5 1 1 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB MAT1-1-2 PF17043.5 gi|452210329|ref|YP_007490443.1| - 0.028 14.3 0.0 0.036 13.9 0.0 1.2 1 1 0 1 1 1 0 Mating type protein 1-1-2 of unknown function Rrf2 PF02082.20 gi|452210329|ref|YP_007490443.1| - 0.045 14.1 0.1 0.064 13.6 0.1 1.2 1 0 0 1 1 1 0 Transcriptional regulator MarR PF01047.22 gi|452210329|ref|YP_007490443.1| - 0.068 13.1 0.1 0.11 12.5 0.1 1.3 1 0 0 1 1 1 0 MarR family Nbl1_Borealin_N PF10444.9 gi|452210329|ref|YP_007490443.1| - 0.084 12.5 1.0 0.14 11.8 0.2 1.8 2 0 0 2 2 2 0 Nbl1 / Borealin N terminal HTH_24 PF13412.6 gi|452210329|ref|YP_007490443.1| - 0.085 12.4 0.1 0.15 11.6 0.1 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|452210329|ref|YP_007490443.1| - 0.12 12.4 0.1 0.2 11.8 0.1 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain tRNA-synt_1c PF00749.21 gi|452210330|ref|YP_007490444.1| - 1e-66 225.0 0.0 1.3e-66 224.7 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 gi|452210330|ref|YP_007490444.1| - 8.9e-29 100.6 0.0 1.8e-28 99.6 0.0 1.5 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain NosD PF05048.13 gi|452210331|ref|YP_007490445.1| - 2e-45 155.0 14.0 3e-45 154.4 14.0 1.3 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|452210331|ref|YP_007490445.1| - 2.8e-14 53.3 14.6 6.1e-14 52.2 14.5 1.6 1 1 0 1 1 1 1 Right handed beta helix region DUF1565 PF07602.11 gi|452210331|ref|YP_007490445.1| - 4e-05 23.1 10.7 0.013 14.8 10.3 3.0 1 1 1 2 2 2 2 Protein of unknown function (DUF1565) Gram_pos_anchor PF00746.21 gi|452210331|ref|YP_007490445.1| - 0.29 11.1 0.1 0.29 11.1 0.1 1.8 2 0 0 2 2 2 0 LPXTG cell wall anchor motif tRNA_anti-codon PF01336.25 gi|452210332|ref|YP_007490446.1| - 4.6e-09 36.1 0.1 0.052 13.5 0.0 3.8 3 1 0 3 3 3 3 OB-fold nucleic acid binding domain RHH_6 PF16762.5 gi|452210333|ref|YP_007490447.1| - 0.12 13.0 0.8 0.55 10.9 0.1 2.3 1 1 0 2 2 2 0 Ribbon-helix-helix domain 2-Hacid_dh_C PF02826.19 gi|452210334|ref|YP_007490448.1| - 2.8e-61 206.0 0.0 4.5e-61 205.3 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|452210334|ref|YP_007490448.1| - 2.3e-41 140.6 2.2 5.2e-41 139.4 0.6 2.3 3 0 0 3 3 3 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACT PF01842.25 gi|452210334|ref|YP_007490448.1| - 2.4e-06 27.2 0.0 6.4e-06 25.8 0.0 1.8 1 0 0 1 1 1 1 ACT domain IlvN PF07991.12 gi|452210334|ref|YP_007490448.1| - 1.7e-05 24.4 0.1 7.4e-05 22.4 0.0 2.1 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_binding_2 PF03446.15 gi|452210334|ref|YP_007490448.1| - 0.0011 19.1 0.2 0.0011 19.1 0.2 2.4 3 0 0 3 3 3 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|452210334|ref|YP_007490448.1| - 0.079 13.6 1.9 1.5 9.4 0.0 3.2 3 1 1 4 4 4 0 NADP oxidoreductase coenzyme F420-dependent DUF2240 PF09999.9 gi|452210335|ref|YP_007490449.1| - 5e-06 26.2 0.1 5.5e-06 26.1 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2240) MazG-like PF12643.7 gi|452210335|ref|YP_007490449.1| - 0.066 13.5 0.0 0.067 13.5 0.0 1.1 1 0 0 1 1 1 0 MazG-like family Ribosomal_S9 PF00380.19 gi|452210336|ref|YP_007490450.1| - 4e-32 111.3 0.1 4.5e-32 111.1 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 RNA_pol_Rpb6 PF01192.22 gi|452210337|ref|YP_007490451.1| - 0.002 18.0 0.0 0.0021 17.9 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb6 DUF2590 PF10761.9 gi|452210337|ref|YP_007490451.1| - 0.094 12.9 0.0 0.1 12.7 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2590) Ribosomal_S2 PF00318.20 gi|452210338|ref|YP_007490452.1| - 3.8e-24 85.1 0.0 2.1e-14 53.3 0.1 2.1 1 1 1 2 2 2 2 Ribosomal protein S2 DUF3131 PF11329.8 gi|452210338|ref|YP_007490452.1| - 0.024 13.7 0.1 0.033 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3131) Memo PF01875.17 gi|452210339|ref|YP_007490453.1| - 8.7e-25 87.4 0.0 1.2e-24 86.9 0.0 1.1 1 0 0 1 1 1 1 Memo-like protein GHMP_kinases_N PF00288.26 gi|452210340|ref|YP_007490454.1| - 6.2e-17 61.6 0.7 6.2e-17 61.6 0.7 1.9 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|452210340|ref|YP_007490454.1| - 1.7e-13 50.7 0.3 1.7e-13 50.7 0.3 2.4 3 0 0 3 3 3 1 GHMP kinases C terminal GalKase_gal_bdg PF10509.9 gi|452210340|ref|YP_007490454.1| - 0.0067 16.0 0.0 0.018 14.6 0.0 1.7 1 0 0 1 1 1 1 Galactokinase galactose-binding signature FMN_dh PF01070.18 gi|452210341|ref|YP_007490455.1| - 6.1e-34 117.6 0.9 2e-23 83.0 0.4 2.4 1 1 1 3 3 3 2 FMN-dependent dehydrogenase IMPDH PF00478.25 gi|452210341|ref|YP_007490455.1| - 8.1e-05 21.8 8.9 0.0079 15.2 0.1 3.7 2 2 1 3 3 3 2 IMP dehydrogenase / GMP reductase domain NMO PF03060.15 gi|452210341|ref|YP_007490455.1| - 0.00018 21.0 1.2 0.00036 20.0 1.2 1.7 1 1 0 1 1 1 1 Nitronate monooxygenase DHO_dh PF01180.21 gi|452210341|ref|YP_007490455.1| - 0.0016 17.8 1.2 0.053 12.7 0.0 2.4 2 0 0 2 2 2 1 Dihydroorotate dehydrogenase Glu_synthase PF01645.17 gi|452210341|ref|YP_007490455.1| - 0.0042 16.3 0.2 0.0073 15.5 0.2 1.4 1 0 0 1 1 1 1 Conserved region in glutamate synthase His_biosynth PF00977.21 gi|452210341|ref|YP_007490455.1| - 0.016 14.6 0.4 0.69 9.3 0.1 2.6 3 0 0 3 3 3 0 Histidine biosynthesis protein Lactamase_B_2 PF12706.7 gi|452210343|ref|YP_007490457.1| - 9.4e-10 38.3 2.1 4e-09 36.3 0.1 2.4 3 0 0 3 3 3 1 Beta-lactamase superfamily domain RMMBL PF07521.12 gi|452210343|ref|YP_007490457.1| - 1.7e-08 34.3 1.0 4.4e-08 32.9 0.2 2.1 2 0 0 2 2 2 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B PF00753.27 gi|452210343|ref|YP_007490457.1| - 5e-08 33.2 0.1 1.2e-07 32.0 0.1 1.7 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily polyprenyl_synt PF00348.17 gi|452210344|ref|YP_007490458.1| - 2.1e-71 240.0 0.0 2.5e-71 239.7 0.0 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase ABC2_membrane_3 PF12698.7 gi|452210345|ref|YP_007490459.1| - 0.86 8.6 4.4 1 8.4 4.4 1.3 1 1 0 1 1 1 0 ABC-2 family transporter protein FtsH_ext PF06480.15 gi|452210345|ref|YP_007490459.1| - 3.2 8.1 9.6 0.56 10.6 2.0 3.0 3 1 0 3 3 3 0 FtsH Extracellular PEP-utilizers_C PF02896.18 gi|452210346|ref|YP_007490460.1| - 7.7e-94 314.1 0.1 1.4e-93 313.2 0.1 1.4 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PPDK_N PF01326.19 gi|452210346|ref|YP_007490460.1| - 2.6e-65 220.9 0.0 4.1e-48 164.3 0.0 3.2 1 1 1 2 2 2 2 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers PF00391.23 gi|452210346|ref|YP_007490460.1| - 4.2e-28 96.9 0.9 1.1e-27 95.5 0.9 1.8 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain PEP-utilisers_N PF05524.13 gi|452210346|ref|YP_007490460.1| - 0.17 12.1 0.7 1.9 8.7 0.1 2.8 3 0 0 3 3 3 0 PEP-utilising enzyme, N-terminal TFIIB PF00382.19 gi|452210347|ref|YP_007490461.1| - 1.5e-44 149.9 2.0 3.1e-21 75.2 0.4 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|452210347|ref|YP_007490461.1| - 1.5e-18 66.0 0.9 1.5e-18 66.0 0.9 1.8 2 0 0 2 2 2 1 TFIIB zinc-binding OrfB_Zn_ribbon PF07282.11 gi|452210347|ref|YP_007490461.1| - 0.00026 20.8 0.4 0.00065 19.6 0.4 1.7 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Sigma70_r4 PF04545.16 gi|452210347|ref|YP_007490461.1| - 0.0035 16.8 0.5 0.019 14.4 0.1 2.5 2 0 0 2 2 2 1 Sigma-70, region 4 Lar_restr_allev PF14354.6 gi|452210347|ref|YP_007490461.1| - 0.005 17.2 1.4 0.049 14.0 0.3 2.7 3 0 0 3 3 3 1 Restriction alleviation protein Lar Cyclin_C PF02984.19 gi|452210347|ref|YP_007490461.1| - 0.0062 16.6 0.0 5.3 7.2 0.0 2.6 3 0 0 3 3 2 2 Cyclin, C-terminal domain RPA_interact_C PF14768.6 gi|452210347|ref|YP_007490461.1| - 0.0081 16.7 0.0 0.6 10.7 0.0 2.5 2 0 0 2 2 2 1 Replication protein A interacting C-terminal HTH_AsnC-type PF13404.6 gi|452210347|ref|YP_007490461.1| - 0.015 15.1 0.4 0.057 13.3 0.2 2.2 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain DZR PF12773.7 gi|452210347|ref|YP_007490461.1| - 0.047 13.7 1.2 0.25 11.4 0.4 2.3 2 0 0 2 2 2 0 Double zinc ribbon A2L_zn_ribbon PF08792.10 gi|452210347|ref|YP_007490461.1| - 0.13 12.1 1.5 0.49 10.2 1.5 2.0 1 1 0 1 1 1 0 A2L zinc ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|452210347|ref|YP_007490461.1| - 0.17 11.8 0.3 0.17 11.8 0.3 1.9 2 0 0 2 2 1 0 Transposase zinc-ribbon domain HTH_31 PF13560.6 gi|452210347|ref|YP_007490461.1| - 0.2 12.0 3.7 7.7 6.9 0.1 3.3 3 0 0 3 3 3 0 Helix-turn-helix domain Ribosomal_S27e PF01667.17 gi|452210347|ref|YP_007490461.1| - 0.5 10.1 1.8 0.5 10.1 0.2 1.8 2 0 0 2 2 2 0 Ribosomal protein S27 Zn-ribbon_8 PF09723.10 gi|452210347|ref|YP_007490461.1| - 0.65 10.2 6.3 0.46 10.7 0.6 3.1 2 1 1 3 3 3 0 Zinc ribbon domain zf-ribbon_3 PF13248.6 gi|452210347|ref|YP_007490461.1| - 1.2 8.6 4.6 18 4.9 4.6 2.4 1 1 0 1 1 1 0 zinc-ribbon domain Methyltransf_13 PF08421.11 gi|452210347|ref|YP_007490461.1| - 1.7 9.0 5.9 2.1 8.7 0.2 2.8 2 1 1 3 3 3 0 Putative zinc binding domain Nudix_N_2 PF14803.6 gi|452210347|ref|YP_007490461.1| - 2.9 7.9 5.9 3.9 7.5 2.5 3.0 2 1 1 3 3 3 0 Nudix N-terminal LysE PF01810.18 gi|452210348|ref|YP_007490462.1| - 2.8e-30 105.2 14.4 3.3e-30 105.0 14.4 1.0 1 0 0 1 1 1 1 LysE type translocator Sigma54_activ_2 PF14532.6 gi|452210349|ref|YP_007490463.1| - 0.034 14.3 0.0 0.037 14.1 0.0 1.1 1 0 0 1 1 1 0 Sigma-54 interaction domain Met_10 PF02475.16 gi|452210350|ref|YP_007490464.1| - 8.1e-64 215.0 0.0 1e-63 214.7 0.0 1.1 1 0 0 1 1 1 1 Met-10+ like-protein Trm5_N PF18093.1 gi|452210350|ref|YP_007490464.1| - 4.1e-16 58.6 0.1 9.3e-16 57.5 0.1 1.6 1 0 0 1 1 1 1 tRNA methyltransferase 5 N-terminal domain MTS PF05175.14 gi|452210350|ref|YP_007490464.1| - 7.4e-09 35.4 0.0 2.8e-08 33.5 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_25 PF13649.6 gi|452210350|ref|YP_007490464.1| - 5.9e-08 33.3 0.0 5.4e-07 30.2 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|452210350|ref|YP_007490464.1| - 1.5e-07 31.3 0.0 2.7e-07 30.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|452210350|ref|YP_007490464.1| - 5e-07 29.5 0.0 7.5e-07 29.0 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 PrmA PF06325.13 gi|452210350|ref|YP_007490464.1| - 7e-07 28.9 0.0 1.2e-06 28.1 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltr_RsmB-F PF01189.17 gi|452210350|ref|YP_007490464.1| - 5.8e-06 26.1 0.0 0.00011 22.0 0.0 2.1 1 1 1 2 2 2 1 16S rRNA methyltransferase RsmB/F TRM PF02005.16 gi|452210350|ref|YP_007490464.1| - 4.1e-05 22.9 0.0 5.2e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_15 PF09445.10 gi|452210350|ref|YP_007490464.1| - 0.00016 21.3 0.0 0.00026 20.6 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_24 PF13578.6 gi|452210350|ref|YP_007490464.1| - 0.00038 21.5 0.0 0.00086 20.3 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|452210350|ref|YP_007490464.1| - 0.00074 19.5 0.0 0.0015 18.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain GidB PF02527.15 gi|452210350|ref|YP_007490464.1| - 0.0014 18.0 0.0 0.0021 17.4 0.0 1.3 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G Methyltransf_11 PF08241.12 gi|452210350|ref|YP_007490464.1| - 0.0032 18.1 0.0 0.0085 16.7 0.0 1.8 2 0 0 2 2 1 1 Methyltransferase domain ADH_zinc_N PF00107.26 gi|452210350|ref|YP_007490464.1| - 0.0034 17.3 0.0 0.006 16.6 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Methyltransf_4 PF02390.17 gi|452210350|ref|YP_007490464.1| - 0.004 16.6 0.0 0.007 15.8 0.0 1.4 1 0 0 1 1 1 1 Putative methyltransferase RrnaAD PF00398.20 gi|452210350|ref|YP_007490464.1| - 0.008 15.3 0.0 0.013 14.6 0.0 1.3 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase PRMT5 PF05185.16 gi|452210350|ref|YP_007490464.1| - 0.0085 16.0 0.1 0.019 14.9 0.0 1.5 2 0 0 2 2 1 1 PRMT5 arginine-N-methyltransferase Methyltransf_12 PF08242.12 gi|452210350|ref|YP_007490464.1| - 0.0097 16.6 0.0 0.021 15.5 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|452210350|ref|YP_007490464.1| - 0.018 14.8 0.1 0.037 13.8 0.0 1.5 2 0 0 2 2 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) FtsJ PF01728.19 gi|452210350|ref|YP_007490464.1| - 0.02 15.0 0.0 0.033 14.3 0.0 1.3 1 0 0 1 1 1 0 FtsJ-like methyltransferase N6_N4_Mtase PF01555.18 gi|452210350|ref|YP_007490464.1| - 0.024 14.4 0.0 0.041 13.6 0.0 1.3 1 0 0 1 1 1 0 DNA methylase DUF43 PF01861.16 gi|452210350|ref|YP_007490464.1| - 0.043 13.0 0.0 0.11 11.7 0.0 1.7 1 1 1 2 2 2 0 Branched-chain polyamine synthase A C-terminal domain DNA_methylase PF00145.17 gi|452210350|ref|YP_007490464.1| - 0.13 11.6 0.0 0.21 10.9 0.0 1.2 1 0 0 1 1 1 0 C-5 cytosine-specific DNA methylase Ubie_methyltran PF01209.18 gi|452210350|ref|YP_007490464.1| - 0.17 11.2 0.0 0.26 10.6 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family AhpC-TSA PF00578.21 gi|452210352|ref|YP_007490466.1| - 2.7e-27 95.1 0.0 3.2e-27 94.9 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|452210352|ref|YP_007490466.1| - 1e-15 57.8 0.0 1.2e-15 57.5 0.0 1.0 1 0 0 1 1 1 1 Redoxin SCO1-SenC PF02630.14 gi|452210352|ref|YP_007490466.1| - 0.0012 18.8 0.0 0.0017 18.3 0.0 1.2 1 0 0 1 1 1 1 SCO1/SenC Cation_efflux PF01545.21 gi|452210353|ref|YP_007490467.1| - 3.6e-44 150.9 12.2 4.4e-44 150.6 12.2 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|452210353|ref|YP_007490467.1| - 4.2e-23 81.3 0.3 6.6e-23 80.6 0.3 1.3 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter Lipoprotein_19 PF13617.6 gi|452210353|ref|YP_007490467.1| - 0.47 10.3 2.2 0.96 9.3 2.2 1.5 1 0 0 1 1 1 0 YnbE-like lipoprotein Hydrolase_4 PF12146.8 gi|452210354|ref|YP_007490468.1| - 9.7e-09 34.8 0.2 0.0025 17.1 0.1 2.8 1 1 0 2 2 2 2 Serine aminopeptidase, S33 DLH PF01738.18 gi|452210354|ref|YP_007490468.1| - 1.9e-06 27.6 0.0 2.2e-06 27.4 0.0 1.1 1 0 0 1 1 1 1 Dienelactone hydrolase family BAAT_C PF08840.11 gi|452210354|ref|YP_007490468.1| - 0.00026 21.0 0.0 0.0017 18.3 0.0 1.9 1 1 1 2 2 2 1 BAAT / Acyl-CoA thioester hydrolase C terminal Abhydrolase_1 PF00561.20 gi|452210354|ref|YP_007490468.1| - 0.00038 20.2 0.7 0.048 13.3 0.4 2.9 1 1 1 2 2 2 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|452210354|ref|YP_007490468.1| - 0.0011 19.6 0.1 1.1 9.8 0.0 2.1 1 1 1 2 2 2 2 Alpha/beta hydrolase family Peptidase_S15 PF02129.18 gi|452210354|ref|YP_007490468.1| - 0.048 13.2 0.1 0.073 12.7 0.1 1.3 1 0 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) Abhydrolase_2 PF02230.16 gi|452210354|ref|YP_007490468.1| - 0.055 13.3 0.0 5.7 6.7 0.0 2.1 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase Peptidase_S9 PF00326.21 gi|452210354|ref|YP_007490468.1| - 0.056 12.9 0.1 7.4 6.0 0.0 2.4 1 1 1 2 2 2 0 Prolyl oligopeptidase family Glyoxalase_5 PF14696.6 gi|452210354|ref|YP_007490468.1| - 0.15 12.2 0.0 0.22 11.7 0.0 1.2 1 0 0 1 1 1 0 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal Pribosyltran PF00156.27 gi|452210355|ref|YP_007490469.1| - 2e-25 89.2 0.1 2.7e-25 88.8 0.1 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.6 gi|452210355|ref|YP_007490469.1| - 0.0011 18.5 0.0 0.0022 17.6 0.0 1.4 1 0 0 1 1 1 1 Phosphoribosyl transferase PALP PF00291.25 gi|452210355|ref|YP_007490469.1| - 0.0022 17.5 0.0 0.014 14.8 0.0 1.9 2 0 0 2 2 2 1 Pyridoxal-phosphate dependent enzyme UPRTase PF14681.6 gi|452210355|ref|YP_007490469.1| - 0.0025 17.3 0.1 0.0037 16.7 0.1 1.6 1 1 0 1 1 1 1 Uracil phosphoribosyltransferase MASE3 PF17159.4 gi|452210356|ref|YP_007490470.1| - 4.6e-87 291.4 19.3 5.9e-87 291.0 19.3 1.1 1 0 0 1 1 1 1 Membrane-associated sensor domain HisKA_2 PF07568.12 gi|452210356|ref|YP_007490470.1| - 1.1e-31 108.7 0.2 2.2e-31 107.8 0.2 1.5 1 0 0 1 1 1 1 Histidine kinase PAS_3 PF08447.12 gi|452210356|ref|YP_007490470.1| - 8.7e-13 48.4 0.0 1.9e-12 47.3 0.0 1.5 1 0 0 1 1 1 1 PAS fold HATPase_c PF02518.26 gi|452210356|ref|YP_007490470.1| - 5.3e-08 33.4 0.0 1.3e-07 32.1 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_9 PF13426.7 gi|452210356|ref|YP_007490470.1| - 2.4e-05 24.5 0.2 0.0001 22.5 0.0 2.1 3 0 0 3 3 3 1 PAS domain HWE_HK PF07536.14 gi|452210356|ref|YP_007490470.1| - 0.00084 20.0 0.1 0.0016 19.1 0.1 1.5 1 0 0 1 1 1 1 HWE histidine kinase HATPase_c_2 PF13581.6 gi|452210356|ref|YP_007490470.1| - 0.0021 18.0 0.0 0.0043 17.0 0.0 1.5 1 1 0 1 1 1 1 Histidine kinase-like ATPase domain SPOB_a PF14689.6 gi|452210356|ref|YP_007490470.1| - 0.1 12.3 0.0 0.23 11.2 0.0 1.6 1 0 0 1 1 1 0 Sensor_kinase_SpoOB-type, alpha-helical domain Glt_symporter PF03616.14 gi|452210357|ref|YP_007490471.1| - 2.1e-09 36.5 15.8 5.4e-07 28.6 8.7 2.4 2 1 0 2 2 2 2 Sodium/glutamate symporter AIM24 PF01987.17 gi|452210358|ref|YP_007490472.1| - 2.6e-33 115.5 0.3 3.1e-33 115.3 0.3 1.1 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 DUF1724 PF08350.10 gi|452210360|ref|YP_007490474.1| - 3.7e-18 65.4 0.0 7.6e-18 64.4 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|452210360|ref|YP_007490474.1| - 0.0036 17.1 0.2 0.0071 16.2 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 gi|452210360|ref|YP_007490474.1| - 0.038 13.9 0.0 0.09 12.7 0.0 1.7 1 0 0 1 1 1 0 HTH domain HTH_20 PF12840.7 gi|452210360|ref|YP_007490474.1| - 0.07 13.2 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain TackOD1 PF18551.1 gi|452210361|ref|YP_007490475.1| - 0.0044 16.7 5.8 0.0086 15.8 5.6 1.6 1 1 0 1 1 1 1 Thaumarchaeal output domain 1 RecR PF02132.15 gi|452210361|ref|YP_007490475.1| - 0.019 14.5 0.9 3 7.5 0.7 2.4 2 0 0 2 2 2 0 RecR protein zf-RING_4 PF14570.6 gi|452210361|ref|YP_007490475.1| - 0.25 11.2 9.1 0.098 12.5 2.4 3.0 3 0 0 3 3 3 0 RING/Ubox like zinc-binding domain zf-UDP PF14569.6 gi|452210361|ref|YP_007490475.1| - 2.6 8.2 8.3 0.16 12.1 2.2 2.0 2 0 0 2 2 2 0 Zinc-binding RING-finger DnaJ_CXXCXGXG PF00684.19 gi|452210362|ref|YP_007490476.1| - 1.1e-06 28.9 16.0 2.3e-06 27.8 16.1 1.6 1 1 0 1 1 1 1 DnaJ central domain Anti-TRAP PF15777.5 gi|452210362|ref|YP_007490476.1| - 7.8e-05 22.6 16.6 0.018 15.0 5.5 2.2 1 1 1 2 2 2 2 Tryptophan RNA-binding attenuator protein inhibitory protein DZR PF12773.7 gi|452210362|ref|YP_007490476.1| - 0.0023 17.9 9.4 0.0087 16.1 9.7 1.7 1 1 1 2 2 2 2 Double zinc ribbon DUF5351 PF17302.2 gi|452210362|ref|YP_007490476.1| - 0.0051 17.0 19.6 0.85 9.9 0.1 4.1 4 0 0 4 4 4 3 Family of unknown function (DUF5351) zf-RING_5 PF14634.6 gi|452210362|ref|YP_007490476.1| - 0.12 12.3 0.4 0.12 12.3 0.4 2.5 3 0 0 3 3 3 0 zinc-RING finger domain HypA PF01155.19 gi|452210362|ref|YP_007490476.1| - 0.86 9.6 7.6 2.1 8.4 3.4 2.1 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn-ribbon_8 PF09723.10 gi|452210362|ref|YP_007490476.1| - 1 9.6 13.4 0.74 10.0 5.8 2.9 1 1 1 2 2 2 0 Zinc ribbon domain zf-H2C2_2 PF13465.6 gi|452210362|ref|YP_007490476.1| - 4.1 8.0 7.2 17 6.1 0.0 3.5 4 0 0 4 4 4 0 Zinc-finger double domain OrfB_Zn_ribbon PF07282.11 gi|452210362|ref|YP_007490476.1| - 9 6.3 10.3 1.7 8.6 1.1 2.5 1 1 2 3 3 3 0 Putative transposase DNA-binding domain PRC PF05239.16 gi|452210363|ref|YP_007490477.1| - 4.5e-19 68.3 0.0 5.4e-19 68.0 0.0 1.1 1 0 0 1 1 1 1 PRC-barrel domain PRC PF05239.16 gi|452210364|ref|YP_007490478.1| - 1.7e-78 258.7 3.6 1.1e-18 67.0 0.0 4.3 4 0 0 4 4 4 4 PRC-barrel domain DUF362 PF04015.12 gi|452210365|ref|YP_007490479.1| - 4.8e-51 173.9 0.0 6.4e-51 173.5 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF362) Fer4 PF00037.27 gi|452210365|ref|YP_007490479.1| - 5.5e-08 32.3 12.4 6.6e-05 22.5 4.8 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|452210365|ref|YP_007490479.1| - 1.7e-05 24.7 15.3 0.0061 16.6 3.4 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|452210365|ref|YP_007490479.1| - 2.6e-05 24.3 11.6 5.2e-05 23.3 11.6 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|452210365|ref|YP_007490479.1| - 0.00016 22.2 13.1 0.00038 21.0 13.1 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452210365|ref|YP_007490479.1| - 0.00076 19.6 14.1 0.0015 18.7 14.1 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|452210365|ref|YP_007490479.1| - 0.0059 17.3 4.0 0.29 11.9 0.3 2.6 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_10 PF13237.6 gi|452210365|ref|YP_007490479.1| - 0.009 16.1 18.9 0.019 15.1 17.1 2.3 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|452210365|ref|YP_007490479.1| - 0.0091 16.0 14.9 0.015 15.3 2.2 2.6 2 0 0 2 2 2 1 4Fe-4S binding domain Lar_N PF09861.9 gi|452210365|ref|YP_007490479.1| - 0.13 11.4 0.0 0.24 10.6 0.0 1.3 1 0 0 1 1 1 0 Lactate racemase N-terminal domain Fer4_13 PF13370.6 gi|452210365|ref|YP_007490479.1| - 0.71 10.5 14.2 1.5 9.5 4.4 2.4 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_4 PF12800.7 gi|452210365|ref|YP_007490479.1| - 1.2 9.8 16.6 5.5 7.8 3.6 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_8 PF13183.6 gi|452210365|ref|YP_007490479.1| - 1.9 9.0 20.7 22 5.6 6.1 2.6 2 1 1 3 3 2 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452210365|ref|YP_007490479.1| - 4.3 8.4 15.2 11 7.0 2.6 2.4 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain HTH_5 PF01022.20 gi|452210366|ref|YP_007490480.1| - 2.9e-07 30.2 0.1 5.7e-07 29.3 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 gi|452210366|ref|YP_007490480.1| - 7e-05 22.3 0.6 0.0003 20.3 0.3 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|452210366|ref|YP_007490480.1| - 8.8e-05 22.5 0.1 0.00018 21.5 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain MarR PF01047.22 gi|452210366|ref|YP_007490480.1| - 0.0021 17.9 0.2 0.0052 16.7 0.2 1.6 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|452210366|ref|YP_007490480.1| - 0.0057 16.5 0.0 0.012 15.5 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.17 gi|452210366|ref|YP_007490480.1| - 0.008 16.0 0.4 0.019 14.8 0.4 1.6 1 0 0 1 1 1 1 TFIIE alpha subunit z-alpha PF02295.17 gi|452210366|ref|YP_007490480.1| - 0.011 15.7 2.9 0.055 13.5 0.5 2.3 2 0 0 2 2 2 0 Adenosine deaminase z-alpha domain RP-C PF03428.13 gi|452210366|ref|YP_007490480.1| - 0.014 15.1 0.2 0.032 13.9 0.1 1.5 1 1 0 1 1 1 0 Replication protein C N-terminal domain DUF2250 PF10007.9 gi|452210366|ref|YP_007490480.1| - 0.029 14.5 0.2 0.05 13.7 0.2 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) Mga PF05043.13 gi|452210366|ref|YP_007490480.1| - 0.039 14.5 0.0 0.076 13.6 0.0 1.5 1 0 0 1 1 1 0 Mga helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|452210366|ref|YP_007490480.1| - 0.044 13.8 0.1 0.08 12.9 0.1 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain ANTAR PF03861.14 gi|452210366|ref|YP_007490480.1| - 0.059 13.2 0.4 9.4 6.2 0.0 2.2 2 0 0 2 2 2 0 ANTAR domain Rrf2 PF02082.20 gi|452210366|ref|YP_007490480.1| - 0.081 13.3 0.1 0.14 12.5 0.1 1.4 1 0 0 1 1 1 0 Transcriptional regulator HTH_36 PF13730.6 gi|452210366|ref|YP_007490480.1| - 0.12 12.3 0.1 0.25 11.3 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain MarR_2 PF12802.7 gi|452210366|ref|YP_007490480.1| - 0.13 12.2 0.0 0.24 11.3 0.0 1.5 1 0 0 1 1 1 0 MarR family Cpn10 PF00166.21 gi|452210367|ref|YP_007490481.1| - 3.1e-22 78.4 1.4 3.4e-22 78.3 1.4 1.0 1 0 0 1 1 1 1 Chaperonin 10 Kd subunit RNase_H PF00075.24 gi|452210368|ref|YP_007490482.1| - 0.0002 21.5 0.0 0.0003 21.0 0.0 1.3 1 0 0 1 1 1 1 RNase H Vut_1 PF02592.15 gi|452210369|ref|YP_007490483.1| - 9.6e-48 162.3 5.8 1.4e-47 161.8 5.8 1.2 1 0 0 1 1 1 1 Putative vitamin uptake transporter UNC-93 PF05978.16 gi|452210369|ref|YP_007490483.1| - 0.059 13.1 1.8 0.064 13.0 0.4 1.9 2 0 0 2 2 2 0 Ion channel regulatory protein UNC-93 MAS20 PF02064.15 gi|452210370|ref|YP_007490484.1| - 0.021 14.9 0.8 0.047 13.8 0.8 1.5 1 0 0 1 1 1 0 MAS20 protein import receptor BCS1_N PF08740.11 gi|452210370|ref|YP_007490484.1| - 0.19 11.7 0.0 0.27 11.2 0.0 1.2 1 0 0 1 1 1 0 BCS1 N terminal Aminotran_1_2 PF00155.21 gi|452210372|ref|YP_007490486.1| - 1.4e-62 212.0 0.0 1.6e-62 211.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|452210372|ref|YP_007490486.1| - 1.5e-10 40.9 0.0 2.3e-10 40.4 0.0 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 gi|452210372|ref|YP_007490486.1| - 7.1e-08 31.4 0.0 1.1e-07 30.8 0.0 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 gi|452210372|ref|YP_007490486.1| - 1.3e-06 27.9 0.0 2e-06 27.3 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 gi|452210372|ref|YP_007490486.1| - 5.2e-06 25.6 0.0 9.6e-06 24.8 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_3 PF00202.21 gi|452210372|ref|YP_007490486.1| - 0.0027 16.4 0.0 0.0038 15.9 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-III OKR_DC_1 PF01276.20 gi|452210372|ref|YP_007490486.1| - 0.015 14.1 0.0 0.02 13.7 0.0 1.2 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain Aminotran_MocR PF12897.7 gi|452210372|ref|YP_007490486.1| - 0.073 11.8 0.0 0.27 10.0 0.0 1.8 1 1 0 1 1 1 0 Alanine-glyoxylate amino-transferase Rubrerythrin PF02915.17 gi|452210375|ref|YP_007490489.1| - 2.8e-23 82.8 11.6 8.9e-22 78.0 11.6 2.0 1 1 0 1 1 1 1 Rubrerythrin DNA_ligase_ZBD PF03119.16 gi|452210375|ref|YP_007490489.1| - 0.0025 17.8 6.4 0.9 9.6 3.1 2.6 2 0 0 2 2 2 2 NAD-dependent DNA ligase C4 zinc finger domain Ferritin PF00210.24 gi|452210375|ref|YP_007490489.1| - 0.0034 17.3 4.8 0.0093 15.9 2.8 2.4 1 1 1 2 2 2 1 Ferritin-like domain Zn-ribbon_8 PF09723.10 gi|452210375|ref|YP_007490489.1| - 0.019 15.1 2.6 0.073 13.2 2.6 2.0 1 1 1 2 2 2 0 Zinc ribbon domain DZR PF12773.7 gi|452210375|ref|YP_007490489.1| - 0.019 15.0 0.5 0.031 14.3 0.5 1.3 1 0 0 1 1 1 0 Double zinc ribbon zinc_ribbon_15 PF17032.5 gi|452210375|ref|YP_007490489.1| - 0.049 14.4 0.2 0.081 13.7 0.2 1.4 1 0 0 1 1 1 0 zinc-ribbon family HypA PF01155.19 gi|452210375|ref|YP_007490489.1| - 0.05 13.6 0.1 0.11 12.5 0.1 1.7 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA RecR PF02132.15 gi|452210375|ref|YP_007490489.1| - 0.077 12.6 0.7 0.18 11.4 0.7 1.6 1 0 0 1 1 1 0 RecR protein Ogr_Delta PF04606.12 gi|452210375|ref|YP_007490489.1| - 0.096 12.7 2.1 6.5 6.8 0.2 2.5 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger zf-ribbon_3 PF13248.6 gi|452210375|ref|YP_007490489.1| - 0.2 11.1 5.9 1 8.9 5.9 2.0 1 1 1 2 2 2 0 zinc-ribbon domain Rubredoxin PF00301.20 gi|452210375|ref|YP_007490489.1| - 0.2 11.7 2.1 14 5.8 0.2 2.4 2 0 0 2 2 2 0 Rubredoxin A2L_zn_ribbon PF08792.10 gi|452210375|ref|YP_007490489.1| - 0.21 11.3 2.1 0.45 10.3 0.1 2.1 2 0 0 2 2 2 0 A2L zinc ribbon domain zf-Di19 PF05605.12 gi|452210375|ref|YP_007490489.1| - 0.3 11.4 3.6 22 5.4 3.6 2.4 1 1 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding Zn-C2H2_12 PF18112.1 gi|452210375|ref|YP_007490489.1| - 0.88 10.1 2.8 27 5.3 0.3 2.5 2 0 0 2 2 2 0 Autophagy receptor zinc finger-C2H2 domain TF_Zn_Ribbon PF08271.12 gi|452210375|ref|YP_007490489.1| - 1.3 8.6 5.5 2.2 7.9 0.9 2.2 1 1 2 3 3 3 0 TFIIB zinc-binding Rad50_zn_hook PF04423.14 gi|452210375|ref|YP_007490489.1| - 3 7.8 9.9 0.46 10.4 0.3 3.2 3 1 1 4 4 4 0 Rad50 zinc hook motif PHP_C PF13263.6 gi|452210376|ref|YP_007490490.1| - 0.0032 17.2 0.0 0.0088 15.8 0.0 1.7 1 0 0 1 1 1 1 PHP-associated PHP PF02811.19 gi|452210376|ref|YP_007490490.1| - 0.014 15.7 0.1 0.032 14.5 0.0 1.7 2 0 0 2 2 2 0 PHP domain zinc_ribbon_4 PF13717.6 gi|452210376|ref|YP_007490490.1| - 0.086 12.8 1.2 0.23 11.4 1.2 1.8 1 0 0 1 1 1 0 zinc-ribbon domain PAC2 PF09754.9 gi|452210377|ref|YP_007490491.1| - 2.6e-51 174.7 0.0 2.9e-51 174.5 0.0 1.0 1 0 0 1 1 1 1 PAC2 family Nop10p PF04135.12 gi|452210378|ref|YP_007490492.1| - 1.1e-24 86.2 1.2 1.2e-24 86.1 1.2 1.0 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family RecR PF02132.15 gi|452210378|ref|YP_007490492.1| - 2.8e-05 23.6 0.9 3.7e-05 23.2 0.9 1.2 1 0 0 1 1 1 1 RecR protein PolC_DP2 PF03833.13 gi|452210378|ref|YP_007490492.1| - 0.00092 17.2 0.2 0.00092 17.2 0.2 1.0 1 0 0 1 1 1 1 DNA polymerase II large subunit DP2 DUF35_N PF12172.8 gi|452210378|ref|YP_007490492.1| - 0.0044 16.9 3.9 0.045 13.6 3.9 2.1 1 1 1 2 2 2 2 Rubredoxin-like zinc ribbon domain (DUF35_N) NRDD PF13597.6 gi|452210378|ref|YP_007490492.1| - 0.0061 15.4 0.6 0.0061 15.4 0.6 1.0 1 0 0 1 1 1 1 Anaerobic ribonucleoside-triphosphate reductase Ribosomal_L32p PF01783.23 gi|452210378|ref|YP_007490492.1| - 0.013 15.7 2.3 2.3 8.5 0.1 2.2 1 1 1 2 2 2 0 Ribosomal L32p protein family zf-ribbon_3 PF13248.6 gi|452210378|ref|YP_007490492.1| - 0.036 13.5 3.8 1 8.9 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-FPG_IleRS PF06827.14 gi|452210378|ref|YP_007490492.1| - 0.072 13.0 7.3 0.85 9.5 0.9 2.2 1 1 1 2 2 2 0 Zinc finger found in FPG and IleRS HalOD2 PF18547.1 gi|452210378|ref|YP_007490492.1| - 0.12 12.4 1.1 8.9 6.3 0.0 2.1 1 1 1 2 2 2 0 Halobacterial output domain 2 TF_Zn_Ribbon PF08271.12 gi|452210378|ref|YP_007490492.1| - 0.12 11.9 6.7 3.2 7.3 0.9 2.1 1 1 1 2 2 2 0 TFIIB zinc-binding HypA PF01155.19 gi|452210378|ref|YP_007490492.1| - 0.18 11.8 1.0 0.2 11.7 1.0 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn-ribbon_8 PF09723.10 gi|452210378|ref|YP_007490492.1| - 0.3 11.3 4.6 2.2 8.5 4.6 2.0 1 1 0 1 1 1 0 Zinc ribbon domain zinc_ribbon_2 PF13240.6 gi|452210378|ref|YP_007490492.1| - 1 9.2 7.8 8.1 6.3 0.3 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-RRN7 PF11781.8 gi|452210378|ref|YP_007490492.1| - 1.2 8.9 5.8 0.7 9.6 0.6 2.1 1 1 1 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 EIF_2_alpha PF07541.12 gi|452210379|ref|YP_007490493.1| - 1.8e-23 82.8 0.0 3e-23 82.1 0.0 1.3 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 2 alpha subunit S1 PF00575.23 gi|452210379|ref|YP_007490493.1| - 1.7e-13 50.7 0.3 1.7e-13 50.7 0.3 1.7 2 0 0 2 2 2 1 S1 RNA binding domain Ribosomal_S27e PF01667.17 gi|452210380|ref|YP_007490494.1| - 4.8e-25 87.0 1.0 5.3e-25 86.9 1.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S27 zf-C2H2_12 PF18658.1 gi|452210380|ref|YP_007490494.1| - 0.0019 17.7 0.2 0.0035 16.9 0.0 1.5 1 1 1 2 2 2 1 Zinc-finger C2H2-type Zn_Tnp_IS91 PF14319.6 gi|452210380|ref|YP_007490494.1| - 0.0079 16.2 0.2 0.0083 16.1 0.2 1.1 1 0 0 1 1 1 1 Transposase zinc-binding domain zf-RING_10 PF16685.5 gi|452210380|ref|YP_007490494.1| - 0.018 15.2 0.2 0.17 12.0 0.0 2.0 2 0 0 2 2 2 0 zinc RING finger of MSL2 HypA PF01155.19 gi|452210380|ref|YP_007490494.1| - 0.023 14.7 0.3 0.026 14.5 0.3 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA FYVE PF01363.21 gi|452210380|ref|YP_007490494.1| - 0.026 14.6 0.3 0.029 14.5 0.3 1.2 1 0 0 1 1 1 0 FYVE zinc finger zf-BED PF02892.15 gi|452210380|ref|YP_007490494.1| - 0.034 14.2 0.6 1.2 9.2 0.0 2.1 2 0 0 2 2 2 0 BED zinc finger zinc_ribbon_6 PF14599.6 gi|452210380|ref|YP_007490494.1| - 0.099 12.7 3.0 0.37 10.8 2.9 2.0 2 1 1 3 3 3 0 Zinc-ribbon Ribosomal_L44 PF00935.19 gi|452210381|ref|YP_007490495.1| - 9.3e-26 90.1 7.5 1.2e-25 89.8 7.5 1.1 1 0 0 1 1 1 1 Ribosomal protein L44 CENP-T_C PF15511.6 gi|452210384|ref|YP_007490498.1| - 0.07 13.2 0.0 7.1 6.8 0.0 2.6 2 1 0 2 2 2 0 Centromere kinetochore component CENP-T histone fold Phasin PF05597.11 gi|452210384|ref|YP_007490498.1| - 0.087 12.8 0.2 0.15 12.1 0.2 1.4 1 0 0 1 1 1 0 Poly(hydroxyalcanoate) granule associated protein (phasin) DNA_primase_S PF01896.19 gi|452210385|ref|YP_007490499.1| - 3.5e-21 76.0 0.0 7.2e-21 75.0 0.0 1.5 1 0 0 1 1 1 1 DNA primase small subunit FGE-sulfatase PF03781.16 gi|452210387|ref|YP_007490501.1| - 2.3e-54 184.7 10.5 2.5e-53 181.3 10.5 1.9 1 1 0 1 1 1 1 Sulfatase-modifying factor enzyme 1 FbpA PF05833.11 gi|452210388|ref|YP_007490502.1| - 7e-116 387.7 4.4 9.1e-116 387.3 4.4 1.1 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) NFACT-R_1 PF05670.13 gi|452210388|ref|YP_007490502.1| - 1e-25 90.5 0.0 2e-25 89.5 0.0 1.5 1 0 0 1 1 1 1 NFACT protein RNA binding domain eRF1_1 PF03463.15 gi|452210389|ref|YP_007490503.1| - 1.3e-28 99.6 0.6 1.9e-28 99.0 0.6 1.3 1 0 0 1 1 1 1 eRF1 domain 1 eRF1_3 PF03465.15 gi|452210389|ref|YP_007490503.1| - 9.9e-24 84.0 0.8 3e-23 82.5 0.3 2.1 2 0 0 2 2 2 1 eRF1 domain 3 eRF1_2 PF03464.15 gi|452210389|ref|YP_007490503.1| - 6.8e-11 42.6 0.0 3.4e-10 40.4 0.0 2.0 1 1 0 1 1 1 1 eRF1 domain 2 S-layer PF07752.11 gi|452210390|ref|YP_007490504.1| - 1.4e-62 211.1 5.7 1.8e-62 210.7 5.7 1.1 1 0 0 1 1 1 1 S-layer protein PGF-CTERM PF18204.1 gi|452210390|ref|YP_007490504.1| - 0.94 9.5 2.6 0.4 10.7 0.2 1.6 2 0 0 2 2 2 0 PGF-CTERM motif PAH PF02671.21 gi|452210391|ref|YP_007490505.1| - 0.0037 17.4 0.4 2 8.6 0.4 3.1 1 1 0 1 1 1 1 Paired amphipathic helix repeat HCV_NS5a PF01506.19 gi|452210391|ref|YP_007490505.1| - 0.15 12.0 1.2 0.36 10.7 1.2 1.7 1 0 0 1 1 1 0 Hepatitis C virus non-structural 5a protein membrane anchor EKLF_TAD1 PF16832.5 gi|452210391|ref|YP_007490505.1| - 0.98 9.3 5.3 35 4.4 0.0 3.4 4 0 0 4 4 4 0 Erythroid krueppel-like transcription factor, transactivation 1 DUF1614 PF07758.11 gi|452210392|ref|YP_007490506.1| - 2.4e-57 193.6 13.2 3.9e-57 193.0 13.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1614) DisA_N PF02457.16 gi|452210393|ref|YP_007490507.1| - 2.8e-20 72.1 0.3 2.8e-20 72.1 0.3 1.9 2 0 0 2 2 2 1 DisA bacterial checkpoint controller nucleotide-binding LigT_PEase PF02834.16 gi|452210394|ref|YP_007490508.1| - 2.2e-30 104.7 0.0 3.7e-16 59.1 0.0 2.0 2 0 0 2 2 2 2 LigT like Phosphoesterase 2_5_RNA_ligase2 PF13563.6 gi|452210394|ref|YP_007490508.1| - 1.6e-12 47.6 0.0 2e-12 47.3 0.0 1.1 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily AKAP7_NLS PF10469.9 gi|452210394|ref|YP_007490508.1| - 2.5e-08 34.1 0.0 3.5e-08 33.6 0.0 1.2 1 0 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain B PF02216.16 gi|452210394|ref|YP_007490508.1| - 0.061 13.3 0.2 0.13 12.2 0.2 1.5 1 0 0 1 1 1 0 B domain Rep_fac_C PF08542.11 gi|452210395|ref|YP_007490509.1| - 1.7e-24 86.1 0.1 4.1e-24 84.8 0.1 1.7 1 0 0 1 1 1 1 Replication factor C C-terminal domain AAA_assoc_2 PF16193.5 gi|452210395|ref|YP_007490509.1| - 4.6e-05 23.7 0.0 7.5e-05 23.0 0.0 1.5 1 1 0 1 1 1 1 AAA C-terminal domain DNA_pol3_delta2 PF13177.6 gi|452210395|ref|YP_007490509.1| - 0.0056 16.5 0.0 0.0091 15.8 0.0 1.4 1 0 0 1 1 1 1 DNA polymerase III, delta subunit Phage_TAC_12 PF12363.8 gi|452210395|ref|YP_007490509.1| - 0.07 13.6 0.1 1.5 9.2 0.0 2.6 1 1 2 3 3 3 0 Phage tail assembly chaperone protein, TAC TPR_16 PF13432.6 gi|452210395|ref|YP_007490509.1| - 0.083 13.6 0.1 1.2 9.8 0.0 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_9 PF13371.6 gi|452210395|ref|YP_007490509.1| - 0.085 13.0 0.0 1.3 9.2 0.0 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat SpoOE-like PF09388.10 gi|452210395|ref|YP_007490509.1| - 0.095 12.6 1.0 4.8 7.2 0.2 2.8 2 1 0 2 2 2 0 Spo0E like sporulation regulatory protein Sm_multidrug_ex PF06695.11 gi|452210396|ref|YP_007490510.1| - 9.7e-41 139.2 1.9 1.6e-40 138.5 1.9 1.3 1 0 0 1 1 1 1 Putative small multi-drug export protein Fer4 PF00037.27 gi|452210397|ref|YP_007490511.1| - 8e-16 57.1 14.4 7.1e-09 35.1 3.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|452210397|ref|YP_007490511.1| - 5.6e-13 48.8 7.7 3.5e-06 27.0 1.1 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|452210397|ref|YP_007490511.1| - 9.2e-13 47.7 13.1 6.2e-07 29.2 2.8 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|452210397|ref|YP_007490511.1| - 2.9e-12 47.0 20.0 1.4e-09 38.4 10.2 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452210397|ref|YP_007490511.1| - 3.1e-12 45.8 10.8 4.1e-06 26.6 1.6 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|452210397|ref|YP_007490511.1| - 5.2e-12 45.7 12.1 4.7e-07 29.8 1.7 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452210397|ref|YP_007490511.1| - 4.7e-10 39.5 20.1 4.7e-07 29.9 10.5 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|452210397|ref|YP_007490511.1| - 1.3e-09 38.4 5.7 0.0002 21.7 0.2 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452210397|ref|YP_007490511.1| - 3.1e-08 34.4 8.8 8.4e-05 23.4 0.5 2.2 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|452210397|ref|YP_007490511.1| - 6e-07 29.5 13.4 4.7e-05 23.6 2.1 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_22 PF17179.4 gi|452210397|ref|YP_007490511.1| - 5e-06 27.3 5.1 0.011 16.5 1.4 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|452210397|ref|YP_007490511.1| - 1.2e-05 25.7 21.1 0.0003 21.3 11.5 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|452210397|ref|YP_007490511.1| - 5.6e-05 23.8 16.9 0.011 16.6 5.1 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|452210397|ref|YP_007490511.1| - 7.6e-05 23.2 12.7 0.01 16.4 2.3 2.5 2 1 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|452210397|ref|YP_007490511.1| - 0.00033 21.3 6.5 0.11 13.3 0.3 2.4 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_18 PF13746.6 gi|452210397|ref|YP_007490511.1| - 0.015 15.5 11.4 0.026 14.7 2.0 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain zf-C2H2_11 PF16622.5 gi|452210397|ref|YP_007490511.1| - 4.4 7.2 11.2 0.74 9.6 2.7 2.2 2 0 0 2 2 2 0 zinc-finger C2H2-type CBFD_NFYB_HMF PF00808.23 gi|452210398|ref|YP_007490512.1| - 7.7e-16 58.1 0.2 9.2e-16 57.9 0.2 1.0 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 gi|452210398|ref|YP_007490512.1| - 8.5e-10 39.1 0.1 1e-09 38.8 0.1 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-T_C PF15511.6 gi|452210398|ref|YP_007490512.1| - 5.5e-07 29.7 0.0 6.4e-07 29.5 0.0 1.1 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold Bromo_TP PF07524.13 gi|452210398|ref|YP_007490512.1| - 7.1e-06 25.9 0.0 8.5e-06 25.7 0.0 1.1 1 0 0 1 1 1 1 Bromodomain associated TFIID-31kDa PF02291.15 gi|452210398|ref|YP_007490512.1| - 1.4e-05 25.2 0.0 1.6e-05 24.9 0.0 1.0 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit CENP-S PF15630.6 gi|452210398|ref|YP_007490512.1| - 3.4e-05 24.1 0.0 4e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 CENP-S protein TAF PF02969.17 gi|452210398|ref|YP_007490512.1| - 0.0086 16.2 0.1 0.0096 16.1 0.1 1.1 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) TFIID-18kDa PF02269.16 gi|452210398|ref|YP_007490512.1| - 0.029 14.4 0.0 0.031 14.3 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor IID, 18kD subunit Peptidase_C39 PF03412.15 gi|452210398|ref|YP_007490512.1| - 0.063 13.1 0.1 0.069 13.0 0.1 1.1 1 0 0 1 1 1 0 Peptidase C39 family TFIID_20kDa PF03847.13 gi|452210398|ref|YP_007490512.1| - 0.073 13.6 0.0 0.082 13.4 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A PCP_red PF08369.10 gi|452210398|ref|YP_007490512.1| - 0.22 11.8 1.9 0.89 9.8 0.5 2.1 2 0 0 2 2 2 0 Proto-chlorophyllide reductase 57 kD subunit Methyltransf_25 PF13649.6 gi|452210399|ref|YP_007490513.1| - 7.4e-06 26.6 0.0 1.9e-05 25.3 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|452210399|ref|YP_007490513.1| - 0.00077 20.1 0.1 0.0024 18.5 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain tRNA_U5-meth_tr PF05958.11 gi|452210399|ref|YP_007490513.1| - 0.035 13.1 0.0 0.066 12.2 0.0 1.4 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase Methyltransf_23 PF13489.6 gi|452210399|ref|YP_007490513.1| - 0.04 13.7 0.0 0.073 12.9 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Ribosomal_L5_C PF00673.21 gi|452210402|ref|YP_007490516.1| - 0.074 13.2 0.0 0.083 13.1 0.0 1.0 1 0 0 1 1 1 0 ribosomal L5P family C-terminus PYC_OADA PF02436.18 gi|452210403|ref|YP_007490517.1| - 2.4e-58 197.2 0.1 4e-58 196.4 0.1 1.3 1 0 0 1 1 1 1 Conserved carboxylase domain HMGL-like PF00682.19 gi|452210403|ref|YP_007490517.1| - 4.2e-48 164.2 0.0 6.1e-48 163.7 0.0 1.2 1 0 0 1 1 1 1 HMGL-like Biotin_lipoyl PF00364.22 gi|452210403|ref|YP_007490517.1| - 1.6e-16 59.9 2.5 1.6e-16 59.9 2.5 2.1 2 0 0 2 2 2 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 gi|452210403|ref|YP_007490517.1| - 1.8e-09 37.2 0.2 6.1e-05 22.8 0.0 2.6 1 1 1 2 2 2 2 Biotin-lipoyl like HlyD_3 PF13437.6 gi|452210403|ref|YP_007490517.1| - 1.5e-05 25.7 2.2 0.059 14.1 0.1 2.8 3 0 0 3 3 3 2 HlyD family secretion protein RnfC_N PF13375.6 gi|452210403|ref|YP_007490517.1| - 9.2e-05 22.3 0.9 0.00054 19.9 0.4 2.5 2 0 0 2 2 2 1 RnfC Barrel sandwich hybrid domain HlyD_D23 PF16576.5 gi|452210403|ref|YP_007490517.1| - 0.00013 21.2 0.4 0.026 13.8 0.0 2.3 1 1 1 2 2 2 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion GCV_H PF01597.19 gi|452210403|ref|YP_007490517.1| - 0.026 14.4 0.4 0.082 12.8 0.4 1.9 1 0 0 1 1 1 0 Glycine cleavage H-protein NQRA PF05896.11 gi|452210403|ref|YP_007490517.1| - 0.049 13.0 0.4 0.088 12.2 0.4 1.3 1 0 0 1 1 1 0 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CPSase_L_D2 PF02786.17 gi|452210404|ref|YP_007490518.1| - 3.2e-82 275.1 0.1 5.1e-82 274.5 0.1 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_N PF00289.22 gi|452210404|ref|YP_007490518.1| - 1.2e-48 164.3 0.1 1.4e-47 160.8 0.1 2.6 2 0 0 2 2 2 1 Biotin carboxylase, N-terminal domain Biotin_carb_C PF02785.19 gi|452210404|ref|YP_007490518.1| - 1.2e-44 150.8 0.0 2.2e-44 150.0 0.0 1.5 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain Dala_Dala_lig_C PF07478.13 gi|452210404|ref|YP_007490518.1| - 5.2e-15 55.5 0.1 1.4e-14 54.1 0.1 1.7 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus RimK PF08443.11 gi|452210404|ref|YP_007490518.1| - 2.3e-09 37.1 0.0 1.9e-08 34.1 0.0 2.1 1 1 0 1 1 1 1 RimK-like ATP-grasp domain ATP-grasp PF02222.22 gi|452210404|ref|YP_007490518.1| - 1.3e-08 34.6 0.1 2.5e-08 33.7 0.1 1.4 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.14 gi|452210404|ref|YP_007490518.1| - 1.5e-07 31.6 0.2 3e-07 30.6 0.0 1.6 2 0 0 2 2 2 1 ATP-grasp domain GARS_A PF01071.19 gi|452210404|ref|YP_007490518.1| - 1.2e-05 25.2 0.4 2.5e-05 24.1 0.1 1.8 2 1 0 2 2 2 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_5 PF13549.6 gi|452210404|ref|YP_007490518.1| - 0.00042 19.8 0.0 0.0011 18.5 0.0 1.6 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.6 gi|452210404|ref|YP_007490518.1| - 0.0012 18.6 0.0 0.0041 16.9 0.0 1.9 1 0 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon Oxidored_nitro PF00148.19 gi|452210404|ref|YP_007490518.1| - 0.011 14.5 0.1 0.032 12.9 0.0 1.7 1 1 0 2 2 2 0 Nitrogenase component 1 type Oxidoreductase ATP-grasp_4 PF13535.6 gi|452210404|ref|YP_007490518.1| - 0.017 14.7 0.0 0.035 13.7 0.0 1.6 1 0 0 1 1 1 0 ATP-grasp domain PK_C PF02887.16 gi|452210404|ref|YP_007490518.1| - 0.032 14.4 2.4 0.91 9.8 0.1 3.4 2 1 1 3 3 3 0 Pyruvate kinase, alpha/beta domain OAD_gamma PF04277.13 gi|452210404|ref|YP_007490518.1| - 0.13 12.9 3.1 0.28 11.8 3.1 1.6 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Radical_SAM PF04055.21 gi|452210404|ref|YP_007490518.1| - 0.17 12.2 0.1 0.78 10.1 0.0 2.2 3 1 0 3 3 2 0 Radical SAM superfamily BPL_LplA_LipB PF03099.19 gi|452210405|ref|YP_007490519.1| - 2.7e-19 69.4 0.0 5.7e-19 68.3 0.0 1.5 2 0 0 2 2 2 1 Biotin/lipoate A/B protein ligase family HTH_11 PF08279.12 gi|452210405|ref|YP_007490519.1| - 4.1e-17 61.9 0.6 1.2e-16 60.4 0.1 2.0 2 0 0 2 2 2 1 HTH domain BPL_C PF02237.17 gi|452210405|ref|YP_007490519.1| - 5e-10 39.1 0.1 1.5e-09 37.6 0.1 1.8 1 0 0 1 1 1 1 Biotin protein ligase C terminal domain BPL_LplA_LipB_2 PF16917.5 gi|452210405|ref|YP_007490519.1| - 2.7e-05 23.8 0.0 3.4e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family HTH_24 PF13412.6 gi|452210405|ref|YP_007490519.1| - 0.00044 19.7 0.0 0.001 18.6 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding S-layer PF07752.11 gi|452210406|ref|YP_007490520.1| - 8.3e-13 48.0 0.0 1.1e-12 47.5 0.0 1.1 1 0 0 1 1 1 1 S-layer protein TMEM252 PF15664.5 gi|452210406|ref|YP_007490520.1| - 0.028 14.1 0.2 0.05 13.3 0.2 1.4 1 1 0 1 1 1 0 Transmembrane protein 252 family CENP-F_leu_zip PF10473.9 gi|452210407|ref|YP_007490521.1| - 0.00035 20.6 13.0 0.00035 20.6 13.0 2.9 2 1 0 2 2 2 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Laminin_I PF06008.14 gi|452210407|ref|YP_007490521.1| - 0.00039 20.2 31.5 0.047 13.4 8.5 2.3 1 1 1 2 2 2 2 Laminin Domain I DUF3450 PF11932.8 gi|452210407|ref|YP_007490521.1| - 0.0012 18.2 4.0 0.0012 18.2 4.0 3.4 1 1 2 3 3 3 1 Protein of unknown function (DUF3450) GAS PF13851.6 gi|452210407|ref|YP_007490521.1| - 0.0015 17.9 12.1 0.0015 17.9 12.1 3.3 1 1 2 3 3 3 1 Growth-arrest specific micro-tubule binding Seryl_tRNA_N PF02403.22 gi|452210407|ref|YP_007490521.1| - 0.016 15.4 35.0 0.043 14.0 8.3 4.5 1 1 4 5 5 5 0 Seryl-tRNA synthetase N-terminal domain HSBP1 PF06825.12 gi|452210407|ref|YP_007490521.1| - 0.017 15.0 6.8 0.96 9.4 0.0 4.5 4 1 0 4 4 4 0 Heat shock factor binding protein 1 DUF1664 PF07889.12 gi|452210407|ref|YP_007490521.1| - 0.043 13.9 22.4 3.4 7.7 5.3 4.2 1 1 3 5 5 5 0 Protein of unknown function (DUF1664) DUF948 PF06103.11 gi|452210407|ref|YP_007490521.1| - 0.06 13.6 7.9 26 5.2 1.0 4.5 2 2 1 3 3 3 0 Bacterial protein of unknown function (DUF948) DUF1854 PF08909.11 gi|452210407|ref|YP_007490521.1| - 0.11 12.3 3.2 0.12 12.2 1.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1854) Spc7 PF08317.11 gi|452210407|ref|YP_007490521.1| - 0.15 10.9 38.1 0.013 14.4 13.6 2.9 1 1 0 2 2 2 0 Spc7 kinetochore protein DUF1192 PF06698.11 gi|452210407|ref|YP_007490521.1| - 0.26 11.4 0.2 0.26 11.4 0.2 4.3 6 0 0 6 6 6 0 Protein of unknown function (DUF1192) MAD PF05557.13 gi|452210407|ref|YP_007490521.1| - 0.3 9.4 38.9 0.074 11.4 14.4 2.0 1 1 1 2 2 2 0 Mitotic checkpoint protein Sec34 PF04136.15 gi|452210407|ref|YP_007490521.1| - 0.31 10.9 22.5 0.16 11.8 0.6 4.0 2 2 2 4 4 4 0 Sec34-like family Atg14 PF10186.9 gi|452210407|ref|YP_007490521.1| - 0.35 9.9 40.4 0.35 9.9 15.3 3.0 1 1 2 3 3 3 0 Vacuolar sorting 38 and autophagy-related subunit 14 FUSC PF04632.12 gi|452210407|ref|YP_007490521.1| - 0.36 9.3 5.3 0.55 8.7 0.4 2.2 1 1 0 2 2 2 0 Fusaric acid resistance protein family HsbA PF12296.8 gi|452210407|ref|YP_007490521.1| - 0.39 11.2 5.5 1.1 9.8 0.1 3.5 3 1 0 3 3 3 0 Hydrophobic surface binding protein A FAM76 PF16046.5 gi|452210407|ref|YP_007490521.1| - 0.45 9.8 35.2 0.35 10.2 16.2 2.6 1 1 2 3 3 3 0 FAM76 protein Fez1 PF06818.15 gi|452210407|ref|YP_007490521.1| - 0.5 10.8 32.8 1.3 9.4 13.2 2.5 1 1 1 2 2 2 0 Fez1 IL5 PF02025.15 gi|452210407|ref|YP_007490521.1| - 0.5 10.7 6.8 0.4 11.0 0.6 3.0 2 1 0 3 3 3 0 Interleukin 5 NPV_P10 PF05531.12 gi|452210407|ref|YP_007490521.1| - 0.64 10.5 14.5 1 9.8 1.4 4.7 2 2 1 3 3 3 0 Nucleopolyhedrovirus P10 protein Filament PF00038.21 gi|452210407|ref|YP_007490521.1| - 0.92 9.0 33.3 6.2 6.3 33.1 2.2 1 1 0 1 1 1 0 Intermediate filament protein DUF3037 PF11236.8 gi|452210407|ref|YP_007490521.1| - 1.1 9.8 6.5 1.2 9.6 1.0 3.1 1 1 1 3 3 3 0 Protein of unknown function (DUF3037) ERM PF00769.19 gi|452210407|ref|YP_007490521.1| - 3.6 7.3 34.0 0.29 10.9 9.8 2.1 1 1 1 2 2 2 0 Ezrin/radixin/moesin family YabA PF06156.13 gi|452210407|ref|YP_007490521.1| - 3.8 8.2 29.9 4.7 7.9 2.1 4.2 2 2 1 3 3 3 0 Initiation control protein YabA Cep57_CLD_2 PF14197.6 gi|452210407|ref|YP_007490521.1| - 4.2 7.5 35.1 0.48 10.6 0.2 6.4 2 2 3 5 5 5 0 Centrosome localisation domain of PPC89 KASH_CCD PF14662.6 gi|452210407|ref|YP_007490521.1| - 5.8 6.7 35.4 0.1 12.4 13.0 2.6 1 1 0 2 2 2 0 Coiled-coil region of CCDC155 or KASH DUF4446 PF14584.6 gi|452210407|ref|YP_007490521.1| - 6.6 6.7 22.7 0.58 10.1 1.1 4.4 2 2 3 5 5 5 0 Protein of unknown function (DUF4446) V_ATPase_I PF01496.19 gi|452210407|ref|YP_007490521.1| - 7.8 4.3 19.0 11 3.8 19.0 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family COG2 PF06148.11 gi|452210407|ref|YP_007490521.1| - 9.2 6.4 20.8 3.1 7.9 2.9 4.3 1 1 3 4 4 4 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF4201 PF13870.6 gi|452210407|ref|YP_007490521.1| - 9.7 5.9 37.7 3.1 7.5 16.1 4.0 1 1 3 4 4 4 0 Domain of unknown function (DUF4201) Spc7 PF08317.11 gi|452210408|ref|YP_007490522.1| - 0.023 13.6 22.9 0.32 9.8 9.7 2.1 1 1 0 2 2 2 0 Spc7 kinetochore protein Peptidase_M75 PF09375.10 gi|452210408|ref|YP_007490522.1| - 0.044 13.3 3.2 0.31 10.5 0.6 2.0 1 1 0 2 2 2 0 Imelysin IZUMO PF15005.6 gi|452210408|ref|YP_007490522.1| - 1.6 9.2 7.9 3.2 8.3 0.6 2.2 1 1 1 2 2 2 0 Izumo sperm-egg fusion, Ig domain-associated V_ATPase_I PF01496.19 gi|452210408|ref|YP_007490522.1| - 8 4.2 17.7 0.12 10.3 2.9 2.0 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family DUF424 PF04242.13 gi|452210409|ref|YP_007490523.1| - 4.5e-32 110.2 0.2 5.1e-32 110.0 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF424) RNase_PH_C PF03725.15 gi|452210409|ref|YP_007490523.1| - 0.54 10.3 3.2 2 8.5 0.3 2.4 2 1 0 2 2 2 0 3' exoribonuclease family, domain 2 MCM PF00493.23 gi|452210410|ref|YP_007490524.1| - 5.8e-96 319.9 0.0 8.6e-96 319.4 0.0 1.2 1 0 0 1 1 1 1 MCM P-loop domain MCM_OB PF17207.3 gi|452210410|ref|YP_007490524.1| - 7.8e-36 122.7 0.1 1.3e-35 122.0 0.1 1.3 1 0 0 1 1 1 1 MCM OB domain MCM_lid PF17855.1 gi|452210410|ref|YP_007490524.1| - 3.1e-27 94.8 0.9 6.2e-27 93.8 0.2 2.0 2 0 0 2 2 2 1 MCM AAA-lid domain MCM_N PF14551.6 gi|452210410|ref|YP_007490524.1| - 7.9e-08 32.8 0.1 3e-07 31.0 0.1 2.0 1 0 0 1 1 1 1 MCM N-terminal domain Mg_chelatase PF01078.21 gi|452210410|ref|YP_007490524.1| - 2.3e-06 27.2 0.1 0.00018 20.9 0.0 2.3 1 1 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 gi|452210410|ref|YP_007490524.1| - 1.7e-05 24.8 0.0 4.6e-05 23.4 0.0 1.8 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_3 PF07726.11 gi|452210410|ref|YP_007490524.1| - 0.003 17.4 0.1 0.014 15.2 0.0 2.2 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA PF00004.29 gi|452210410|ref|YP_007490524.1| - 0.11 12.9 0.0 0.37 11.2 0.0 1.9 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 gi|452210410|ref|YP_007490524.1| - 0.16 12.2 0.0 10 6.3 0.0 2.9 3 1 0 3 3 3 0 AAA domain tRNA_anti-codon PF01336.25 gi|452210410|ref|YP_007490524.1| - 0.17 11.9 0.1 0.79 9.8 0.0 2.1 2 0 0 2 2 2 0 OB-fold nucleic acid binding domain SpoU_methylase PF00588.19 gi|452210411|ref|YP_007490525.1| - 1.8e-31 109.2 0.0 2.5e-31 108.8 0.0 1.2 1 0 0 1 1 1 1 SpoU rRNA Methylase family AdoHcyase_NAD PF00670.21 gi|452210411|ref|YP_007490525.1| - 0.13 12.3 0.0 0.35 10.9 0.0 1.7 2 0 0 2 2 2 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Fer4 PF00037.27 gi|452210412|ref|YP_007490526.1| - 2e-13 49.5 14.3 9.9e-09 34.7 4.4 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|452210412|ref|YP_007490526.1| - 5.8e-13 49.2 28.0 1.5e-08 35.1 17.0 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|452210412|ref|YP_007490526.1| - 2.9e-12 46.1 15.8 1.9e-07 30.9 2.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|452210412|ref|YP_007490526.1| - 9e-10 38.1 15.1 4.8e-07 29.5 1.7 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|452210412|ref|YP_007490526.1| - 3.6e-09 36.6 15.1 8.8e-08 32.2 15.3 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|452210412|ref|YP_007490526.1| - 7.3e-09 35.6 11.5 8.9e-09 35.4 11.5 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452210412|ref|YP_007490526.1| - 1.8e-08 34.4 29.2 4.5e-06 26.7 16.9 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|452210412|ref|YP_007490526.1| - 3.2e-06 27.2 18.2 6.8e-05 23.1 3.8 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_15 PF13459.6 gi|452210412|ref|YP_007490526.1| - 3.7e-05 24.4 1.2 3.7e-05 24.4 1.2 2.2 1 1 1 2 2 2 1 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|452210412|ref|YP_007490526.1| - 3.8e-05 24.1 2.8 3.8e-05 24.1 2.8 2.4 1 1 1 2 2 2 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_8 PF13183.6 gi|452210412|ref|YP_007490526.1| - 0.00014 22.2 17.1 0.00062 20.2 17.1 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452210412|ref|YP_007490526.1| - 0.0027 18.6 17.2 0.14 13.1 5.0 2.3 1 1 3 4 4 4 4 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|452210412|ref|YP_007490526.1| - 0.0039 17.7 17.3 0.034 14.7 4.6 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|452210412|ref|YP_007490526.1| - 0.013 16.4 5.9 0.013 16.4 5.9 2.6 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|452210412|ref|YP_007490526.1| - 0.061 14.2 17.8 0.079 13.8 3.7 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain SPATIAL PF15256.6 gi|452210412|ref|YP_007490526.1| - 0.17 12.2 0.0 0.19 12.1 0.0 1.1 1 0 0 1 1 1 0 SPATIAL ETF_QO PF05187.13 gi|452210412|ref|YP_007490526.1| - 1.3 9.2 6.5 2.9 8.1 6.4 1.6 1 1 0 1 1 1 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Peptidase_C39_2 PF13529.6 gi|452210413|ref|YP_007490527.1| - 3.7e-10 40.5 1.9 3.7e-10 40.5 1.9 2.1 1 1 0 1 1 1 1 Peptidase_C39 like family Peptidase_M61 PF05299.12 gi|452210413|ref|YP_007490527.1| - 0.083 13.3 0.8 0.21 12.0 0.8 1.7 1 0 0 1 1 1 0 M61 glycyl aminopeptidase Peptidase_C1 PF00112.23 gi|452210413|ref|YP_007490527.1| - 1.4 8.9 11.1 0.19 11.8 0.6 2.4 2 0 0 2 2 2 0 Papain family cysteine protease NosD PF05048.13 gi|452210414|ref|YP_007490528.1| - 0.047 12.9 19.1 0.1 11.8 19.1 1.6 1 1 0 1 1 1 0 Periplasmic copper-binding protein (NosD) NIR_SIR PF01077.22 gi|452210415|ref|YP_007490529.1| - 6.7e-30 103.7 0.0 1e-29 103.1 0.0 1.2 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.17 gi|452210415|ref|YP_007490529.1| - 2e-15 56.4 0.0 3.2e-15 55.7 0.0 1.3 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain PMBR PF09373.10 gi|452210415|ref|YP_007490529.1| - 0.069 13.3 0.1 0.19 11.9 0.0 1.8 2 0 0 2 2 2 0 Pseudomurein-binding repeat Nitrate_red_gam PF02665.14 gi|452210416|ref|YP_007490530.1| - 3.3e-07 30.1 7.5 1.9e-05 24.3 1.3 2.4 2 0 0 2 2 2 2 Nitrate reductase gamma subunit CCG PF02754.16 gi|452210417|ref|YP_007490531.1| - 4.1e-30 103.8 2.3 3.1e-15 56.2 0.4 2.8 4 0 0 4 4 2 2 Cysteine-rich domain Fer4_8 PF13183.6 gi|452210417|ref|YP_007490531.1| - 3.5e-10 40.2 2.8 3.5e-10 40.2 2.8 2.8 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|452210417|ref|YP_007490531.1| - 1.4e-07 31.9 2.1 1.4e-07 31.9 2.1 2.9 3 1 0 3 3 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452210417|ref|YP_007490531.1| - 5.9e-07 29.6 17.2 1.8e-06 28.0 6.9 3.2 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|452210417|ref|YP_007490531.1| - 1.6e-06 28.6 6.1 1.6e-06 28.6 6.1 2.8 3 1 0 3 3 3 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452210417|ref|YP_007490531.1| - 1.7e-05 25.7 6.7 1.7e-05 25.7 6.7 2.8 2 1 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|452210417|ref|YP_007490531.1| - 6e-05 23.1 11.5 6e-05 23.1 11.5 3.5 3 1 0 3 3 2 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|452210417|ref|YP_007490531.1| - 9.4e-05 22.1 13.1 0.0072 16.1 1.7 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|452210417|ref|YP_007490531.1| - 0.00013 22.1 3.3 0.22 11.7 0.3 2.7 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452210417|ref|YP_007490531.1| - 0.00085 19.3 16.4 0.0033 17.4 1.7 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|452210417|ref|YP_007490531.1| - 0.0016 18.5 8.8 0.21 11.8 0.6 3.5 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|452210417|ref|YP_007490531.1| - 0.0063 16.6 1.8 0.0063 16.6 1.8 2.9 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|452210417|ref|YP_007490531.1| - 0.015 16.2 15.6 0.029 15.3 3.7 3.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|452210417|ref|YP_007490531.1| - 0.038 14.8 11.6 0.81 10.6 0.4 3.8 4 0 0 4 4 3 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|452210417|ref|YP_007490531.1| - 0.053 14.0 2.4 0.053 14.0 2.4 3.5 4 0 0 4 4 2 0 4Fe-4S binding domain zf-FLZ PF04570.14 gi|452210417|ref|YP_007490531.1| - 8.6 5.9 8.4 0.47 10.0 0.2 2.9 3 0 0 3 3 3 0 zinc-finger of the FCS-type, C2-C2 DUF116 PF01976.17 gi|452210418|ref|YP_007490532.1| - 7.2e-44 149.0 6.7 8.5e-44 148.8 6.7 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF116 ABC2_membrane PF01061.24 gi|452210418|ref|YP_007490532.1| - 0.013 14.9 3.1 0.018 14.5 3.1 1.1 1 0 0 1 1 1 0 ABC-2 type transporter EGL-1 PF11430.8 gi|452210418|ref|YP_007490532.1| - 0.037 13.9 2.9 0.35 10.8 0.3 2.6 2 0 0 2 2 2 0 Programmed cell death activator EGL-1 HIG_1_N PF04588.13 gi|452210418|ref|YP_007490532.1| - 0.13 12.5 0.5 0.28 11.4 0.5 1.6 1 1 0 1 1 1 0 Hypoxia induced protein conserved region ABC2_membrane_3 PF12698.7 gi|452210418|ref|YP_007490532.1| - 0.27 10.3 5.5 0.36 9.9 5.5 1.2 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF116 PF01976.17 gi|452210419|ref|YP_007490533.1| - 6.6e-43 145.9 0.5 8.1e-43 145.6 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF116 DUF2897 PF11446.8 gi|452210419|ref|YP_007490533.1| - 7.1 6.6 6.1 13 5.7 6.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2897) NAD_binding_8 PF13450.6 gi|452210420|ref|YP_007490534.1| - 1.2e-09 38.2 0.3 4.8e-08 33.1 0.1 3.0 3 0 0 3 3 3 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 gi|452210420|ref|YP_007490534.1| - 6.3e-05 21.8 0.2 0.00014 20.8 0.0 1.7 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox PF00070.27 gi|452210420|ref|YP_007490534.1| - 0.00033 21.2 0.0 0.0065 17.0 0.0 2.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 gi|452210420|ref|YP_007490534.1| - 0.00048 19.5 0.0 0.00063 19.1 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|452210420|ref|YP_007490534.1| - 0.00077 19.1 1.7 0.018 14.7 0.3 2.5 1 1 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|452210420|ref|YP_007490534.1| - 0.00077 18.7 0.0 0.0056 15.8 0.0 1.9 2 0 0 2 2 2 1 FAD binding domain Pyr_redox_3 PF13738.6 gi|452210420|ref|YP_007490534.1| - 0.0088 15.3 0.1 0.036 13.3 0.0 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 gi|452210420|ref|YP_007490534.1| - 0.036 13.4 0.0 0.13 11.5 0.0 1.9 1 1 1 2 2 2 0 Flavin containing amine oxidoreductase GIDA PF01134.22 gi|452210420|ref|YP_007490534.1| - 0.049 12.7 0.0 0.08 12.0 0.0 1.3 1 0 0 1 1 1 0 Glucose inhibited division protein A SE PF08491.10 gi|452210420|ref|YP_007490534.1| - 0.063 12.3 0.0 0.11 11.6 0.0 1.3 1 0 0 1 1 1 0 Squalene epoxidase AlaDh_PNT_C PF01262.21 gi|452210420|ref|YP_007490534.1| - 0.074 12.3 0.0 1.2 8.4 0.0 2.4 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.17 gi|452210420|ref|YP_007490534.1| - 0.078 12.2 0.0 0.13 11.5 0.0 1.4 1 0 0 1 1 1 0 Thi4 family NAD_Gly3P_dh_N PF01210.23 gi|452210420|ref|YP_007490534.1| - 0.086 12.8 0.1 0.22 11.5 0.1 1.7 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FAD_oxidored PF12831.7 gi|452210420|ref|YP_007490534.1| - 0.13 11.6 0.0 0.24 10.7 0.0 1.4 1 0 0 1 1 1 0 FAD dependent oxidoreductase Trp_halogenase PF04820.14 gi|452210421|ref|YP_007490535.1| - 2.1e-11 43.3 0.0 6.6e-08 31.8 0.0 2.0 1 1 1 2 2 2 2 Tryptophan halogenase FAD_binding_3 PF01494.19 gi|452210421|ref|YP_007490535.1| - 2.3e-11 43.6 0.0 6.2e-10 38.8 0.0 2.6 1 1 0 1 1 1 1 FAD binding domain Pyr_redox_3 PF13738.6 gi|452210421|ref|YP_007490535.1| - 2.6e-09 36.8 0.8 0.00072 18.9 0.0 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|452210421|ref|YP_007490535.1| - 1.7e-07 30.9 0.0 2.5e-07 30.4 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|452210421|ref|YP_007490535.1| - 7.1e-07 28.7 0.0 2e-06 27.3 0.0 1.7 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|452210421|ref|YP_007490535.1| - 2e-06 26.8 0.1 0.0056 15.4 0.0 2.7 3 0 0 3 3 3 2 HI0933-like protein DAO PF01266.24 gi|452210421|ref|YP_007490535.1| - 5e-05 23.0 0.1 0.12 11.9 0.1 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|452210421|ref|YP_007490535.1| - 0.00031 20.9 0.2 0.011 15.9 0.1 2.4 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain PCNA_N PF00705.18 gi|452210421|ref|YP_007490535.1| - 0.00036 20.2 0.1 0.00066 19.4 0.1 1.4 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, N-terminal domain Lycopene_cycl PF05834.12 gi|452210421|ref|YP_007490535.1| - 0.0018 17.4 0.0 0.058 12.4 0.0 2.1 2 0 0 2 2 2 1 Lycopene cyclase protein Thi4 PF01946.17 gi|452210421|ref|YP_007490535.1| - 0.0029 16.9 0.2 0.0061 15.8 0.1 1.6 2 0 0 2 2 2 1 Thi4 family GIDA PF01134.22 gi|452210421|ref|YP_007490535.1| - 0.0054 15.9 0.0 0.01 15.0 0.0 1.4 1 1 0 1 1 1 1 Glucose inhibited division protein A FAD_binding_2 PF00890.24 gi|452210421|ref|YP_007490535.1| - 0.01 14.9 0.1 0.02 14.0 0.1 1.4 1 0 0 1 1 1 0 FAD binding domain Pyr_redox PF00070.27 gi|452210421|ref|YP_007490535.1| - 0.019 15.5 0.1 4.7 7.8 0.0 2.5 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Dus PF01207.17 gi|452210423|ref|YP_007490537.1| - 3.4e-14 52.6 0.1 7.6e-14 51.5 0.1 1.5 1 1 0 1 1 1 1 Dihydrouridine synthase (Dus) His_biosynth PF00977.21 gi|452210423|ref|YP_007490537.1| - 2.8e-07 30.2 0.1 7.5e-07 28.8 0.1 1.7 1 1 0 1 1 1 1 Histidine biosynthesis protein IMPDH PF00478.25 gi|452210423|ref|YP_007490537.1| - 0.00047 19.2 0.3 0.0007 18.7 0.3 1.1 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain DUF4350 PF14258.6 gi|452210423|ref|YP_007490537.1| - 0.023 15.1 0.1 4.3 7.9 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4350) Hydrolase_like PF13242.6 gi|452210423|ref|YP_007490537.1| - 0.13 12.4 0.2 0.34 11.0 0.2 1.7 1 0 0 1 1 1 0 HAD-hyrolase-like CitG PF01874.16 gi|452210424|ref|YP_007490538.1| - 1.8e-78 264.1 0.0 2e-78 263.9 0.0 1.0 1 0 0 1 1 1 1 ATP:dephospho-CoA triphosphoribosyl transferase DUF447 PF04289.12 gi|452210425|ref|YP_007490539.1| - 6.7e-51 172.5 0.0 7.7e-51 172.4 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF447) Flavoprotein PF02441.19 gi|452210426|ref|YP_007490540.1| - 7.8e-16 58.2 0.0 1.3e-15 57.5 0.0 1.3 1 0 0 1 1 1 1 Flavoprotein Fer4 PF00037.27 gi|452210426|ref|YP_007490540.1| - 3.8e-08 32.8 12.3 2.2e-07 30.4 2.1 3.2 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_7 PF12838.7 gi|452210426|ref|YP_007490540.1| - 1.2e-06 29.0 4.3 0.00032 21.2 0.5 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452210426|ref|YP_007490540.1| - 4.4e-06 27.5 8.2 0.0008 20.3 0.3 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|452210426|ref|YP_007490540.1| - 4.3e-05 24.0 2.4 0.013 16.0 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452210426|ref|YP_007490540.1| - 0.00015 21.9 11.1 0.00062 19.9 11.7 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|452210426|ref|YP_007490540.1| - 0.00015 21.8 9.7 0.00024 21.2 9.7 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452210426|ref|YP_007490540.1| - 0.00022 21.1 11.2 0.0042 17.1 0.8 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_11 PF13247.6 gi|452210426|ref|YP_007490540.1| - 0.00065 19.8 3.1 0.001 19.1 3.1 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|452210426|ref|YP_007490540.1| - 0.00068 19.7 22.8 0.0043 17.1 1.1 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|452210426|ref|YP_007490540.1| - 0.0012 18.8 13.6 0.0037 17.3 1.9 2.5 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.6 gi|452210426|ref|YP_007490540.1| - 1.1 10.0 9.9 1.3 9.8 0.2 3.4 3 1 1 4 4 3 0 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|452210426|ref|YP_007490540.1| - 3.6 8.2 12.4 0.98 10.0 0.6 3.1 2 1 1 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_8 PF13183.6 gi|452210426|ref|YP_007490540.1| - 6.3 7.3 12.9 0.24 11.9 0.9 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain ABC_tran PF00005.27 gi|452210427|ref|YP_007490541.1| - 8.8e-29 100.8 0.0 1.2e-28 100.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|452210427|ref|YP_007490541.1| - 5.2e-05 22.8 0.1 0.00012 21.6 0.1 1.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|452210427|ref|YP_007490541.1| - 0.00023 21.1 0.8 0.0015 18.4 0.1 2.0 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|452210427|ref|YP_007490541.1| - 0.015 15.0 0.1 0.029 14.1 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|452210427|ref|YP_007490541.1| - 0.088 12.7 0.0 0.15 12.0 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase ABC_tran PF00005.27 gi|452210428|ref|YP_007490542.1| - 1.4e-21 77.4 0.0 1.8e-21 77.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|452210428|ref|YP_007490542.1| - 5.1e-15 55.7 0.3 1.1e-14 54.7 0.3 1.6 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_7 PF12775.7 gi|452210428|ref|YP_007490542.1| - 0.0075 15.8 0.0 0.011 15.2 0.0 1.2 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_29 PF13555.6 gi|452210428|ref|YP_007490542.1| - 0.014 15.1 0.0 0.027 14.2 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain Mg_chelatase PF01078.21 gi|452210428|ref|YP_007490542.1| - 0.024 14.0 0.0 0.037 13.4 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 gi|452210428|ref|YP_007490542.1| - 0.027 14.2 0.0 0.069 12.9 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_22 PF13401.6 gi|452210428|ref|YP_007490542.1| - 0.036 14.3 0.0 0.081 13.2 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 gi|452210428|ref|YP_007490542.1| - 0.068 13.5 0.0 0.095 13.1 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain AAA PF00004.29 gi|452210428|ref|YP_007490542.1| - 0.093 13.2 0.1 0.16 12.4 0.1 1.6 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 gi|452210428|ref|YP_007490542.1| - 0.12 12.3 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 NACHT domain SMC_N PF02463.19 gi|452210428|ref|YP_007490542.1| - 0.19 11.1 0.0 0.62 9.4 0.0 1.7 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain BPD_transp_1 PF00528.22 gi|452210429|ref|YP_007490543.1| - 9.8e-19 67.8 8.8 9.8e-19 67.8 8.8 1.7 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|452210429|ref|YP_007490543.1| - 0.061 13.3 0.3 0.061 13.3 0.3 2.6 4 0 0 4 4 4 0 N-terminal TM domain of oligopeptide transport permease C DUF3169 PF11368.8 gi|452210429|ref|YP_007490543.1| - 0.27 10.7 2.0 0.38 10.2 0.8 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3169) BPD_transp_1 PF00528.22 gi|452210430|ref|YP_007490544.1| - 2.3e-28 99.2 8.7 1.9e-27 96.2 8.7 2.1 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component Gly-zipper_YMGG PF13441.6 gi|452210430|ref|YP_007490544.1| - 0.057 13.2 0.1 0.11 12.3 0.1 1.3 1 0 0 1 1 1 0 YMGG-like Gly-zipper SBP_bac_5 PF00496.22 gi|452210431|ref|YP_007490545.1| - 1.2e-65 221.9 1.2 1.7e-65 221.4 1.2 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle PHP PF02811.19 gi|452210432|ref|YP_007490546.1| - 0.00012 22.4 0.0 0.00041 20.7 0.0 1.8 1 1 0 1 1 1 1 PHP domain Seipin PF06775.14 gi|452210432|ref|YP_007490546.1| - 0.0014 18.8 0.1 0.0022 18.1 0.1 1.3 1 0 0 1 1 1 1 Putative adipose-regulatory protein (Seipin) EFhand_Ca_insen PF08726.10 gi|452210432|ref|YP_007490546.1| - 0.026 14.6 0.0 0.063 13.4 0.0 1.6 1 0 0 1 1 1 0 Ca2+ insensitive EF hand PHP_C PF13263.6 gi|452210432|ref|YP_007490546.1| - 0.088 12.6 0.0 0.17 11.6 0.0 1.5 1 0 0 1 1 1 0 PHP-associated Mrr_cat_2 PF13156.6 gi|452210433|ref|YP_007490547.1| - 0.0094 15.9 0.0 0.015 15.2 0.0 1.2 1 0 0 1 1 1 1 Restriction endonuclease Prefoldin_2 PF01920.20 gi|452210435|ref|YP_007490549.1| - 9.3e-05 22.3 8.5 0.002 18.1 0.7 2.6 1 1 2 3 3 3 2 Prefoldin subunit ZapB PF06005.12 gi|452210435|ref|YP_007490549.1| - 0.00019 21.8 8.2 0.013 15.9 0.3 2.6 1 1 1 2 2 2 1 Cell division protein ZapB DUF4795 PF16043.5 gi|452210435|ref|YP_007490549.1| - 0.00031 20.4 8.1 0.00047 19.8 8.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4795) DUF2730 PF10805.8 gi|452210435|ref|YP_007490549.1| - 0.00079 19.5 4.9 0.023 14.8 0.5 2.2 1 1 1 2 2 2 1 Protein of unknown function (DUF2730) TolA_bind_tri PF16331.5 gi|452210435|ref|YP_007490549.1| - 0.0015 18.6 5.7 0.43 10.7 0.2 2.4 1 1 1 2 2 2 2 TolA binding protein trimerisation bZIP_1 PF00170.21 gi|452210435|ref|YP_007490549.1| - 0.0024 17.9 8.8 0.18 11.9 0.9 2.9 2 1 1 3 3 3 2 bZIP transcription factor Baculo_PEP_C PF04513.12 gi|452210435|ref|YP_007490549.1| - 0.0025 17.9 4.6 3.3 7.8 0.1 2.2 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus Snapin_Pallidin PF14712.6 gi|452210435|ref|YP_007490549.1| - 0.0035 17.7 4.6 0.33 11.4 2.4 2.5 1 1 1 2 2 2 1 Snapin/Pallidin FlaC_arch PF05377.11 gi|452210435|ref|YP_007490549.1| - 0.0038 17.6 11.1 0.32 11.4 4.0 3.1 1 1 1 2 2 2 2 Flagella accessory protein C (FlaC) Fib_alpha PF08702.10 gi|452210435|ref|YP_007490549.1| - 0.0041 17.3 8.2 0.031 14.5 8.2 1.9 1 1 0 1 1 1 1 Fibrinogen alpha/beta chain family GAS PF13851.6 gi|452210435|ref|YP_007490549.1| - 0.0048 16.3 6.4 0.023 14.0 1.5 2.0 1 1 1 2 2 2 1 Growth-arrest specific micro-tubule binding Cluap1 PF10234.9 gi|452210435|ref|YP_007490549.1| - 0.0049 16.3 7.7 0.0072 15.8 7.7 1.2 1 0 0 1 1 1 1 Clusterin-associated protein-1 Spc24 PF08286.11 gi|452210435|ref|YP_007490549.1| - 0.0058 16.9 9.8 0.22 11.8 3.9 2.2 1 1 0 2 2 2 2 Spc24 subunit of Ndc80 DUF3829 PF12889.7 gi|452210435|ref|YP_007490549.1| - 0.013 15.0 4.9 0.24 10.8 0.3 2.3 1 1 0 2 2 2 0 Protein of unknown function (DUF3829) Herpes_UL6 PF01763.16 gi|452210435|ref|YP_007490549.1| - 0.02 13.4 1.9 0.023 13.2 1.9 1.2 1 0 0 1 1 1 0 Herpesvirus UL6 like Atg14 PF10186.9 gi|452210435|ref|YP_007490549.1| - 0.02 14.0 7.1 0.069 12.2 7.1 1.8 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF5082 PF16888.5 gi|452210435|ref|YP_007490549.1| - 0.022 15.0 8.4 0.26 11.6 8.4 2.5 1 1 0 1 1 1 0 Domain of unknown function (DUF5082) Cep57_MT_bd PF06657.13 gi|452210435|ref|YP_007490549.1| - 0.025 15.0 2.7 0.074 13.5 0.1 2.5 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 Cob_adeno_trans PF01923.18 gi|452210435|ref|YP_007490549.1| - 0.025 14.7 0.9 0.034 14.3 0.8 1.3 1 1 0 1 1 1 0 Cobalamin adenosyltransferase BLOC1_2 PF10046.9 gi|452210435|ref|YP_007490549.1| - 0.025 14.9 5.9 0.87 9.9 1.9 2.2 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Fez1 PF06818.15 gi|452210435|ref|YP_007490549.1| - 0.028 14.9 7.1 0.031 14.7 7.1 1.1 1 0 0 1 1 1 0 Fez1 YabA PF06156.13 gi|452210435|ref|YP_007490549.1| - 0.03 14.9 8.3 1.7 9.4 5.7 2.2 1 1 1 2 2 2 0 Initiation control protein YabA Spc7 PF08317.11 gi|452210435|ref|YP_007490549.1| - 0.03 13.2 10.1 0.092 11.6 9.2 1.6 1 1 0 1 1 1 0 Spc7 kinetochore protein Swi5 PF07061.11 gi|452210435|ref|YP_007490549.1| - 0.033 14.3 4.2 1.7 8.8 0.8 2.4 1 1 0 2 2 2 0 Swi5 NPV_P10 PF05531.12 gi|452210435|ref|YP_007490549.1| - 0.038 14.4 5.8 0.75 10.3 4.4 2.3 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein DUF1664 PF07889.12 gi|452210435|ref|YP_007490549.1| - 0.045 13.8 4.9 1.1 9.4 4.9 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Laminin_II PF06009.12 gi|452210435|ref|YP_007490549.1| - 0.049 13.6 6.9 4.7 7.2 0.1 2.8 1 1 0 2 2 2 0 Laminin Domain II DUF1843 PF08898.10 gi|452210435|ref|YP_007490549.1| - 0.054 14.0 0.2 1.7 9.2 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF1843) EMC3_TMCO1 PF01956.16 gi|452210435|ref|YP_007490549.1| - 0.055 13.2 0.4 0.082 12.6 0.3 1.3 1 1 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like Vps51 PF08700.11 gi|452210435|ref|YP_007490549.1| - 0.057 13.5 3.9 0.85 9.7 0.3 2.8 1 1 1 2 2 2 0 Vps51/Vps67 SlyX PF04102.12 gi|452210435|ref|YP_007490549.1| - 0.059 14.0 3.6 2.6 8.8 1.4 2.6 1 1 0 2 2 2 0 SlyX CLZ PF16526.5 gi|452210435|ref|YP_007490549.1| - 0.059 13.7 7.5 0.66 10.4 1.0 2.9 1 1 2 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF4200 PF13863.6 gi|452210435|ref|YP_007490549.1| - 0.072 13.5 5.7 0.12 12.8 5.5 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4200) Bacillus_HBL PF05791.11 gi|452210435|ref|YP_007490549.1| - 0.089 12.6 6.9 0.68 9.7 0.9 2.0 1 1 1 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) PCRF PF03462.18 gi|452210435|ref|YP_007490549.1| - 0.091 12.6 3.6 0.11 12.3 3.6 1.2 1 0 0 1 1 1 0 PCRF domain Hemerythrin PF01814.23 gi|452210435|ref|YP_007490549.1| - 0.092 13.4 0.4 0.43 11.2 0.4 1.9 1 1 0 1 1 1 0 Hemerythrin HHE cation binding domain ABC_tran_CTD PF16326.5 gi|452210435|ref|YP_007490549.1| - 0.098 12.9 6.1 4.2 7.7 1.2 2.7 1 1 1 2 2 2 0 ABC transporter C-terminal domain ADIP PF11559.8 gi|452210435|ref|YP_007490549.1| - 0.1 12.7 9.3 0.038 14.1 2.2 2.0 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding DUF848 PF05852.11 gi|452210435|ref|YP_007490549.1| - 0.11 12.6 8.1 0.23 11.6 6.1 2.0 1 1 1 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) Occludin_ELL PF07303.13 gi|452210435|ref|YP_007490549.1| - 0.14 12.9 4.4 1.1 10.0 1.1 2.1 1 1 1 2 2 2 0 Occludin homology domain Prefoldin PF02996.17 gi|452210435|ref|YP_007490549.1| - 0.14 12.0 7.8 48 3.9 7.8 2.9 1 1 0 1 1 1 0 Prefoldin subunit NleF_casp_inhib PF16809.5 gi|452210435|ref|YP_007490549.1| - 0.16 11.8 7.6 1 9.2 4.6 2.2 1 1 1 2 2 2 0 NleF caspase inhibitor XhlA PF10779.9 gi|452210435|ref|YP_007490549.1| - 0.17 12.1 10.3 1.1 9.5 0.5 3.0 1 1 0 2 2 2 0 Haemolysin XhlA YojJ PF10372.9 gi|452210435|ref|YP_007490549.1| - 0.18 11.9 5.4 3.6 7.7 0.4 2.7 1 1 1 2 2 2 0 Bacterial membrane-spanning protein N-terminus GIT_CC PF16559.5 gi|452210435|ref|YP_007490549.1| - 0.19 11.6 6.4 0.25 11.2 1.7 2.5 1 1 1 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor APG6_N PF17675.1 gi|452210435|ref|YP_007490549.1| - 0.23 12.0 10.4 2.1 8.9 2.2 2.2 1 1 1 2 2 2 0 Apg6 coiled-coil region DUF2203 PF09969.9 gi|452210435|ref|YP_007490549.1| - 0.24 12.1 2.4 6.2 7.6 2.4 2.1 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) DUF4407 PF14362.6 gi|452210435|ref|YP_007490549.1| - 0.25 10.7 3.4 1 8.7 0.2 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) RPW8 PF05659.11 gi|452210435|ref|YP_007490549.1| - 0.28 10.9 5.7 0.84 9.3 0.9 2.3 1 1 1 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 TPR_MLP1_2 PF07926.12 gi|452210435|ref|YP_007490549.1| - 0.29 11.2 8.2 2.4 8.2 0.6 2.6 1 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein DUF4140 PF13600.6 gi|452210435|ref|YP_007490549.1| - 0.31 11.5 4.7 3.3 8.2 0.4 2.2 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) Csm2_III-A PF03750.13 gi|452210435|ref|YP_007490549.1| - 0.34 11.7 3.6 6.1 7.7 3.2 2.2 1 1 1 2 2 2 0 Csm2 Type III-A GTP-bdg_M PF16360.5 gi|452210435|ref|YP_007490549.1| - 0.41 11.3 3.8 2.5 8.8 2.1 2.8 1 1 1 2 2 2 0 GTP-binding GTPase Middle Region Prominin PF05478.11 gi|452210435|ref|YP_007490549.1| - 0.44 8.4 6.1 1.1 7.1 5.1 1.7 1 1 0 1 1 1 0 Prominin Ax_dynein_light PF10211.9 gi|452210435|ref|YP_007490549.1| - 0.44 10.5 9.0 0.5 10.3 2.1 2.2 1 1 1 2 2 2 0 Axonemal dynein light chain CorA PF01544.18 gi|452210435|ref|YP_007490549.1| - 0.47 9.7 7.7 4.2 6.6 7.7 2.2 1 1 0 1 1 1 0 CorA-like Mg2+ transporter protein DASH_Dad3 PF08656.10 gi|452210435|ref|YP_007490549.1| - 0.5 10.5 8.7 38 4.4 8.7 2.9 1 1 0 1 1 1 0 DASH complex subunit Dad3 DASH_Dam1 PF08653.10 gi|452210435|ref|YP_007490549.1| - 0.53 10.1 5.1 17 5.3 0.5 3.6 2 2 2 4 4 4 0 DASH complex subunit Dam1 Med4 PF10018.9 gi|452210435|ref|YP_007490549.1| - 0.63 9.7 6.9 5 6.8 0.8 2.3 1 1 1 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 Rho_Binding PF08912.11 gi|452210435|ref|YP_007490549.1| - 0.64 10.9 10.3 0.7 10.8 0.2 3.1 1 1 1 2 2 2 0 Rho Binding FliD_N PF02465.18 gi|452210435|ref|YP_007490549.1| - 0.67 10.7 3.8 6.8 7.5 0.1 2.3 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus HalX PF08663.10 gi|452210435|ref|YP_007490549.1| - 1.1 9.7 5.7 2.9 8.3 0.1 3.2 1 1 2 3 3 3 0 HalX domain DivIVA PF05103.13 gi|452210435|ref|YP_007490549.1| - 1.7 8.7 8.3 2.6 8.1 0.2 2.8 1 1 2 3 3 3 0 DivIVA protein UPF0184 PF03670.13 gi|452210435|ref|YP_007490549.1| - 2.1 8.8 7.7 1.9 8.9 3.1 2.6 1 1 2 3 3 3 0 Uncharacterised protein family (UPF0184) GrpE PF01025.19 gi|452210435|ref|YP_007490549.1| - 2.8 7.6 9.6 6.1 6.5 1.4 2.1 1 1 1 2 2 2 0 GrpE YgaB PF14182.6 gi|452210435|ref|YP_007490549.1| - 2.9 8.3 8.4 3.5 8.1 1.6 2.8 1 1 2 3 3 3 0 YgaB-like protein LMBR1 PF04791.16 gi|452210435|ref|YP_007490549.1| - 6.1 5.6 5.4 7.1 5.4 5.4 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF2683 PF10884.8 gi|452210436|ref|YP_007490550.1| - 1.3e-23 83.1 2.6 1.4e-23 82.9 2.6 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2683) XH PF03469.14 gi|452210436|ref|YP_007490550.1| - 0.039 13.9 0.1 0.045 13.7 0.1 1.1 1 0 0 1 1 1 0 XH domain NurA PF09376.10 gi|452210437|ref|YP_007490551.1| - 2.3e-07 30.7 0.0 4e-07 30.0 0.0 1.5 1 1 0 1 1 1 1 NurA domain DUF87 PF01935.17 gi|452210438|ref|YP_007490552.1| - 3.1e-10 40.6 0.0 1.3e-09 38.5 0.0 1.9 1 1 0 1 1 1 1 Helicase HerA, central domain DUF853 PF05872.12 gi|452210438|ref|YP_007490552.1| - 9.8e-07 27.7 0.0 0.0019 16.9 0.0 2.2 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) AAA_10 PF12846.7 gi|452210438|ref|YP_007490552.1| - 4.2e-06 25.9 0.0 0.0048 15.9 0.0 2.4 3 0 0 3 3 3 2 AAA-like domain AAA_22 PF13401.6 gi|452210438|ref|YP_007490552.1| - 3.2e-05 24.2 0.0 0.0032 17.7 0.0 2.4 2 0 0 2 2 2 1 AAA domain DEAD PF00270.29 gi|452210438|ref|YP_007490552.1| - 0.00023 21.0 0.0 0.61 9.8 0.0 2.2 2 0 0 2 2 2 2 DEAD/DEAH box helicase ResIII PF04851.15 gi|452210438|ref|YP_007490552.1| - 0.00044 20.3 0.0 0.058 13.4 0.0 2.3 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA PF00004.29 gi|452210438|ref|YP_007490552.1| - 0.00075 19.9 1.0 0.67 10.4 0.0 2.8 2 1 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 gi|452210438|ref|YP_007490552.1| - 0.0035 16.9 0.0 0.0062 16.1 0.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region TrwB_AAD_bind PF10412.9 gi|452210438|ref|YP_007490552.1| - 0.0087 15.0 0.0 0.015 14.2 0.0 1.3 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain RNA_helicase PF00910.22 gi|452210438|ref|YP_007490552.1| - 0.01 16.2 0.0 0.02 15.2 0.0 1.5 1 0 0 1 1 1 0 RNA helicase HAS-barrel PF09378.10 gi|452210438|ref|YP_007490552.1| - 0.02 15.0 0.0 0.061 13.5 0.0 1.8 1 0 0 1 1 1 0 HAS barrel domain AAA_16 PF13191.6 gi|452210438|ref|YP_007490552.1| - 0.024 15.0 0.0 0.27 11.6 0.0 2.3 2 0 0 2 2 2 0 AAA ATPase domain AAA_18 PF13238.6 gi|452210438|ref|YP_007490552.1| - 0.036 14.6 0.0 0.11 13.1 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|452210438|ref|YP_007490552.1| - 0.057 13.6 0.0 0.11 12.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain SopD PF11047.8 gi|452210438|ref|YP_007490552.1| - 0.14 11.3 0.1 0.44 9.7 0.0 1.8 2 0 0 2 2 2 0 Salmonella outer protein D FtsK_SpoIIIE PF01580.18 gi|452210438|ref|YP_007490552.1| - 0.14 11.5 0.0 0.52 9.6 0.0 1.8 2 0 0 2 2 2 0 FtsK/SpoIIIE family Sigma54_activat PF00158.26 gi|452210438|ref|YP_007490552.1| - 0.15 11.8 0.0 0.26 11.0 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain Flavoprotein PF02441.19 gi|452210439|ref|YP_007490553.1| - 3e-27 95.3 0.0 3.6e-27 95.0 0.0 1.1 1 0 0 1 1 1 1 Flavoprotein HD PF01966.22 gi|452210441|ref|YP_007490555.1| - 9.4e-15 54.9 3.4 3.8e-13 49.7 0.9 2.8 2 1 1 3 3 3 2 HD domain UPF0052 PF01933.18 gi|452210442|ref|YP_007490556.1| - 6.1e-48 163.5 0.0 7.2e-48 163.3 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0052 Pribosyltran PF00156.27 gi|452210444|ref|YP_007490558.1| - 4.3e-20 71.8 0.5 5.7e-20 71.4 0.5 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|452210444|ref|YP_007490558.1| - 0.00011 21.8 0.0 0.00016 21.2 0.0 1.3 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|452210444|ref|YP_007490558.1| - 0.00062 19.3 0.1 0.00091 18.8 0.1 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase Lipoprotein_9 PF03180.14 gi|452210444|ref|YP_007490558.1| - 0.16 11.1 0.0 0.24 10.5 0.0 1.2 1 0 0 1 1 1 0 NLPA lipoprotein Diphthamide_syn PF01866.17 gi|452210445|ref|YP_007490559.1| - 1.8e-87 293.6 0.0 2.2e-87 293.4 0.0 1.0 1 0 0 1 1 1 1 Putative diphthamide synthesis protein MTS PF05175.14 gi|452210446|ref|YP_007490560.1| - 5.8e-14 52.0 0.0 7.6e-14 51.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|452210446|ref|YP_007490560.1| - 7.9e-14 51.7 0.1 1e-13 51.4 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 gi|452210446|ref|YP_007490560.1| - 2.3e-10 41.1 0.1 4.4e-10 40.1 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|452210446|ref|YP_007490560.1| - 8.3e-10 38.7 0.0 1.3e-09 38.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.18 gi|452210446|ref|YP_007490560.1| - 4.4e-07 29.8 0.3 2e-06 27.6 0.3 1.8 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_11 PF08241.12 gi|452210446|ref|YP_007490560.1| - 5.7e-07 30.1 0.0 1.2e-06 29.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 gi|452210446|ref|YP_007490560.1| - 9.5e-05 22.2 0.0 0.00011 22.0 0.0 1.2 1 1 0 1 1 1 1 Met-10+ like-protein Methyltransf_23 PF13489.6 gi|452210446|ref|YP_007490560.1| - 0.0012 18.7 0.0 0.0014 18.5 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 gi|452210446|ref|YP_007490560.1| - 0.0029 17.6 0.0 0.0031 17.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|452210446|ref|YP_007490560.1| - 0.0041 16.8 0.0 0.0053 16.4 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Ubie_methyltran PF01209.18 gi|452210446|ref|YP_007490560.1| - 0.0087 15.4 0.0 0.012 15.0 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family PCMT PF01135.19 gi|452210446|ref|YP_007490560.1| - 0.013 15.3 0.0 0.017 14.9 0.0 1.1 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_15 PF09445.10 gi|452210446|ref|YP_007490560.1| - 0.018 14.6 0.0 0.026 14.1 0.0 1.3 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase ADH_zinc_N PF00107.26 gi|452210446|ref|YP_007490560.1| - 0.024 14.6 0.0 0.043 13.8 0.0 1.4 1 0 0 1 1 1 0 Zinc-binding dehydrogenase Methyltransf_12 PF08242.12 gi|452210446|ref|YP_007490560.1| - 0.025 15.3 0.1 0.09 13.5 0.1 1.9 2 1 0 2 2 1 0 Methyltransferase domain Methyltransf_18 PF12847.7 gi|452210446|ref|YP_007490560.1| - 0.034 14.1 0.1 0.052 13.5 0.1 1.2 1 0 0 1 1 1 0 Methyltransferase domain Hema_stalk PF08720.10 gi|452210446|ref|YP_007490560.1| - 0.046 13.4 0.0 0.068 12.9 0.0 1.2 1 0 0 1 1 1 0 Influenza C hemagglutinin stalk DUF43 PF01861.16 gi|452210446|ref|YP_007490560.1| - 0.11 11.7 0.0 0.16 11.1 0.0 1.3 1 0 0 1 1 1 0 Branched-chain polyamine synthase A C-terminal domain ECR1_N PF14382.6 gi|452210447|ref|YP_007490561.1| - 1.3e-08 34.5 0.2 2.7e-08 33.4 0.2 1.6 1 0 0 1 1 1 1 Exosome complex exonuclease RRP4 N-terminal region EXOSC1 PF10447.9 gi|452210447|ref|YP_007490561.1| - 2.6e-06 28.0 1.7 0.00021 21.8 0.4 2.6 1 1 1 2 2 2 2 Exosome component EXOSC1/CSL4 S1 PF00575.23 gi|452210447|ref|YP_007490561.1| - 0.015 15.6 6.2 0.81 10.1 0.8 2.7 2 0 0 2 2 2 0 S1 RNA binding domain ALS_ss_C PF10369.9 gi|452210447|ref|YP_007490561.1| - 0.017 15.3 0.4 2.9 8.2 0.0 2.8 1 1 1 2 2 2 0 Small subunit of acetolactate synthase HypA PF01155.19 gi|452210447|ref|YP_007490561.1| - 0.038 14.0 0.1 0.061 13.4 0.1 1.4 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-LITAF-like PF10601.9 gi|452210447|ref|YP_007490561.1| - 0.16 12.3 0.7 20 5.5 0.1 2.5 3 0 0 3 3 3 0 LITAF-like zinc ribbon domain DUF4362 PF14275.6 gi|452210447|ref|YP_007490561.1| - 7 7.0 5.7 17 5.8 0.9 2.8 1 1 2 3 3 3 0 Domain of unknown function (DUF4362) RNA_pol_L_2 PF13656.6 gi|452210448|ref|YP_007490562.1| - 6.5e-16 57.9 0.0 7.9e-16 57.6 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L PF01193.24 gi|452210448|ref|YP_007490562.1| - 0.0042 16.5 0.1 0.014 14.8 0.1 1.8 1 1 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain CRM1_C PF08767.11 gi|452210448|ref|YP_007490562.1| - 0.078 12.1 0.0 0.087 12.0 0.0 1.1 1 0 0 1 1 1 0 CRM1 C terminal SepSecS PF05889.13 gi|452210449|ref|YP_007490563.1| - 1.7e-56 191.6 0.0 3.2e-56 190.7 0.0 1.4 1 1 0 1 1 1 1 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS Aminotran_5 PF00266.19 gi|452210449|ref|YP_007490563.1| - 1.1e-15 57.5 0.0 1.5e-15 57.1 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 gi|452210449|ref|YP_007490563.1| - 7.3e-11 41.8 0.0 9.8e-11 41.4 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II OKR_DC_1 PF01276.20 gi|452210449|ref|YP_007490563.1| - 0.0016 17.3 0.0 0.0056 15.5 0.0 1.7 1 1 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain Pyridoxal_deC PF00282.19 gi|452210449|ref|YP_007490563.1| - 0.0074 15.0 0.0 0.012 14.3 0.0 1.3 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain PspC PF04024.12 gi|452210449|ref|YP_007490563.1| - 0.018 14.9 0.0 0.072 12.9 0.0 1.9 2 0 0 2 2 2 0 PspC domain DegT_DnrJ_EryC1 PF01041.17 gi|452210449|ref|YP_007490563.1| - 0.055 12.8 0.0 0.097 12.0 0.0 1.3 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family Rib PF08428.10 gi|452210449|ref|YP_007490563.1| - 0.097 12.7 0.1 0.2 11.6 0.1 1.5 1 0 0 1 1 1 0 Rib/alpha-like repeat HTH_20 PF12840.7 gi|452210450|ref|YP_007490564.1| - 2.6e-05 24.2 0.0 3.9e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|452210450|ref|YP_007490564.1| - 0.00036 20.3 0.0 0.00055 19.7 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_34 PF13601.6 gi|452210450|ref|YP_007490564.1| - 0.00073 19.7 0.0 0.0011 19.1 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_45 PF14947.6 gi|452210450|ref|YP_007490564.1| - 0.002 18.0 0.1 0.0032 17.4 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix TrmB PF01978.19 gi|452210450|ref|YP_007490564.1| - 0.035 14.0 0.0 0.076 12.9 0.0 1.7 1 1 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB DUF2148 PF09918.9 gi|452210451|ref|YP_007490565.1| - 6.7e-30 102.9 1.3 1.4e-29 101.9 1.3 1.6 1 0 0 1 1 1 1 Uncharacterized protein containing a ferredoxin domain (DUF2148) FeS PF04060.13 gi|452210451|ref|YP_007490565.1| - 0.00061 19.4 1.9 0.0014 18.3 1.9 1.6 1 0 0 1 1 1 1 Putative Fe-S cluster zf-C2H2_2 PF12756.7 gi|452210451|ref|YP_007490565.1| - 0.13 12.7 0.0 0.19 12.0 0.0 1.2 1 0 0 1 1 1 0 C2H2 type zinc-finger (2 copies) Orn_Arg_deC_N PF02784.16 gi|452210452|ref|YP_007490566.1| - 8.6e-30 103.9 0.0 1.1e-29 103.6 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.22 gi|452210452|ref|YP_007490566.1| - 1.5e-20 73.2 0.0 1.6e-20 73.2 0.0 1.3 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain mTERF PF02536.14 gi|452210454|ref|YP_007490568.1| - 0.056 12.4 0.0 0.056 12.4 0.0 1.0 1 0 0 1 1 1 0 mTERF Sulfatase PF00884.23 gi|452210456|ref|YP_007490570.1| - 3.2e-63 214.0 0.0 4.8e-63 213.4 0.0 1.3 1 0 0 1 1 1 1 Sulfatase Sulfatase_C PF14707.6 gi|452210456|ref|YP_007490570.1| - 1.7e-05 25.6 0.0 3.1e-05 24.7 0.0 1.4 1 0 0 1 1 1 1 C-terminal region of aryl-sulfatase Phosphodiest PF01663.22 gi|452210456|ref|YP_007490570.1| - 0.00068 19.3 0.0 0.18 11.4 0.0 2.3 2 0 0 2 2 2 2 Type I phosphodiesterase / nucleotide pyrophosphatase DUF5040 PF16443.5 gi|452210456|ref|YP_007490570.1| - 0.2 11.1 0.0 0.32 10.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5040) Radical_SAM PF04055.21 gi|452210457|ref|YP_007490571.1| - 6.4e-16 59.2 0.0 1.1e-15 58.4 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily SEC-C PF02810.15 gi|452210457|ref|YP_007490571.1| - 2e-10 40.4 5.7 2e-10 40.4 5.7 1.7 2 0 0 2 2 2 1 SEC-C motif SPASM PF13186.6 gi|452210457|ref|YP_007490571.1| - 1.6e-07 31.8 0.1 3.7e-07 30.5 0.1 1.7 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.6 gi|452210457|ref|YP_007490571.1| - 0.0002 21.6 0.8 0.00029 21.1 0.0 1.6 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|452210457|ref|YP_007490571.1| - 0.025 14.7 0.0 0.047 13.8 0.0 1.4 1 0 0 1 1 1 0 4Fe-4S single cluster domain DNA_pol_B_thumb PF14791.6 gi|452210459|ref|YP_007490573.1| - 2.5e-22 78.8 0.4 7.2e-22 77.3 0.1 2.0 2 0 0 2 2 1 1 DNA polymerase beta thumb HHH_8 PF14716.6 gi|452210459|ref|YP_007490573.1| - 7.7e-19 67.8 0.6 7.7e-19 67.8 0.6 3.6 3 1 1 4 4 4 1 Helix-hairpin-helix domain PHP PF02811.19 gi|452210459|ref|YP_007490573.1| - 2.9e-11 43.9 0.0 7.5e-11 42.6 0.0 1.8 1 0 0 1 1 1 1 PHP domain HHH_5 PF14520.6 gi|452210459|ref|YP_007490573.1| - 4.9e-07 30.3 5.5 6.5e-05 23.4 0.5 3.6 3 0 0 3 3 3 2 Helix-hairpin-helix domain HHH_3 PF12836.7 gi|452210459|ref|YP_007490573.1| - 0.00032 20.9 0.7 0.93 9.8 0.0 3.1 3 0 0 3 3 3 2 Helix-hairpin-helix motif HHH_2 PF12826.7 gi|452210459|ref|YP_007490573.1| - 0.0018 18.4 0.8 0.03 14.4 0.0 2.9 3 0 0 3 3 3 1 Helix-hairpin-helix motif DNA_pol_B_palm PF14792.6 gi|452210459|ref|YP_007490573.1| - 0.0018 18.4 0.0 0.0059 16.8 0.0 1.8 1 0 0 1 1 1 1 DNA polymerase beta palm HHH PF00633.23 gi|452210459|ref|YP_007490573.1| - 0.0048 16.7 0.6 0.19 11.6 0.0 2.6 2 0 0 2 2 2 1 Helix-hairpin-helix motif RNase_P_p30 PF01876.16 gi|452210459|ref|YP_007490573.1| - 0.01 15.3 0.0 0.02 14.4 0.0 1.5 1 1 0 1 1 1 0 RNase P subunit p30 DNA_pol_lambd_f PF10391.9 gi|452210459|ref|YP_007490573.1| - 0.094 12.6 0.0 5.6 6.9 0.0 2.7 2 0 0 2 2 2 0 Fingers domain of DNA polymerase lambda DUF1700 PF08006.11 gi|452210459|ref|YP_007490573.1| - 0.23 11.0 0.3 1.9 8.0 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1700) DNA_ligase_A_M PF01068.21 gi|452210460|ref|YP_007490574.1| - 2e-55 187.6 1.1 3.2e-55 187.0 1.1 1.3 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_N PF04675.14 gi|452210460|ref|YP_007490574.1| - 1.8e-39 135.8 0.4 3.1e-38 131.8 0.3 2.5 2 0 0 2 2 2 1 DNA ligase N terminus DNA_ligase_A_C PF04679.15 gi|452210460|ref|YP_007490574.1| - 5.2e-22 78.3 0.0 1.8e-21 76.6 0.0 2.0 1 0 0 1 1 1 1 ATP dependent DNA ligase C terminal region RNA_ligase PF09414.10 gi|452210460|ref|YP_007490574.1| - 1.9e-07 31.5 0.7 3.7e-07 30.6 0.7 1.5 1 0 0 1 1 1 1 RNA ligase DNA_ligase_OB_2 PF14743.6 gi|452210460|ref|YP_007490574.1| - 1.6e-05 24.9 0.2 0.0075 16.3 0.0 2.6 2 0 0 2 2 2 2 DNA ligase OB-like domain Vps5 PF09325.10 gi|452210460|ref|YP_007490574.1| - 0.028 14.0 0.5 0.12 11.9 0.1 2.0 2 0 0 2 2 2 0 Vps5 C terminal like 4HBT PF03061.22 gi|452210461|ref|YP_007490575.1| - 2.5e-10 40.5 0.0 3.8e-10 40.0 0.0 1.2 1 0 0 1 1 1 1 Thioesterase superfamily DUF4442 PF14539.6 gi|452210461|ref|YP_007490575.1| - 8.5e-05 22.7 0.2 0.00016 21.8 0.2 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4442) FCH PF00611.23 gi|452210461|ref|YP_007490575.1| - 0.092 13.0 0.0 0.27 11.5 0.0 1.7 1 1 1 2 2 2 0 Fes/CIP4, and EFC/F-BAR homology domain DUF4430 PF14478.6 gi|452210464|ref|YP_007490578.1| - 1.7e-06 28.5 1.2 1.7e-06 28.5 1.2 2.7 3 0 0 3 3 3 1 Domain of unknown function (DUF4430) ApoO PF09769.9 gi|452210464|ref|YP_007490578.1| - 0.086 12.8 0.2 0.3 11.0 0.2 1.9 1 0 0 1 1 1 0 Apolipoprotein O I_LWEQ PF01608.17 gi|452210464|ref|YP_007490578.1| - 0.85 9.8 4.9 0.57 10.4 1.2 2.5 2 0 0 2 2 2 0 I/LWEQ domain Alanine_zipper PF11839.8 gi|452210464|ref|YP_007490578.1| - 1 9.8 4.0 2.9 8.3 4.0 1.8 1 0 0 1 1 1 0 Alanine-zipper, major outer membrane lipoprotein Ion_trans_2 PF07885.16 gi|452210465|ref|YP_007490579.1| - 1.3e-06 28.2 8.3 1.3e-06 28.2 8.3 1.8 2 0 0 2 2 2 1 Ion channel Lig_chan PF00060.26 gi|452210465|ref|YP_007490579.1| - 7e-05 22.7 0.6 0.00013 21.8 0.6 1.6 1 0 0 1 1 1 1 Ligand-gated ion channel HDOD PF08668.12 gi|452210465|ref|YP_007490579.1| - 0.056 12.9 0.0 0.096 12.2 0.0 1.3 1 0 0 1 1 1 0 HDOD domain ASFV_J13L PF05568.11 gi|452210465|ref|YP_007490579.1| - 0.14 11.9 0.7 0.21 11.3 0.7 1.2 1 0 0 1 1 1 0 African swine fever virus J13L protein Class_IIIsignal PF04021.12 gi|452210465|ref|YP_007490579.1| - 0.23 11.5 0.2 0.23 11.5 0.2 2.5 2 0 0 2 2 2 0 Class III signal peptide RPAP1_N PF08621.10 gi|452210465|ref|YP_007490579.1| - 3 7.7 6.8 0.43 10.4 2.3 1.9 2 0 0 2 2 2 0 RPAP1-like, N-terminal Ferric_reduct PF01794.19 gi|452210467|ref|YP_007490581.1| - 2.5e-06 27.6 15.0 4.1e-06 26.9 8.9 2.7 3 0 0 3 3 3 1 Ferric reductase like transmembrane component DUF4231 PF14015.6 gi|452210467|ref|YP_007490581.1| - 0.0057 17.1 0.9 1.7 9.2 0.2 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF4231) DUF3961 PF13106.6 gi|452210467|ref|YP_007490581.1| - 0.037 13.7 0.5 0.093 12.4 0.5 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3961) DUF4191 PF13829.6 gi|452210467|ref|YP_007490581.1| - 0.041 13.2 2.7 2.1 7.6 0.5 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4191) Acetyltransf_4 PF13420.7 gi|452210468|ref|YP_007490582.1| - 1.4e-17 64.3 0.0 1.6e-17 64.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|452210468|ref|YP_007490582.1| - 6.2e-14 52.2 0.0 7.8e-14 51.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.7 gi|452210468|ref|YP_007490582.1| - 1.3e-11 45.3 0.0 1.6e-11 45.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|452210468|ref|YP_007490582.1| - 1.4e-06 28.6 0.0 1.9e-06 28.2 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|452210468|ref|YP_007490582.1| - 1.1e-05 25.4 0.0 1.3e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|452210468|ref|YP_007490582.1| - 0.033 14.2 0.0 0.045 13.7 0.0 1.3 1 0 0 1 1 1 0 FR47-like protein Acetyltransf_CG PF14542.6 gi|452210468|ref|YP_007490582.1| - 0.057 13.6 0.0 0.14 12.3 0.0 1.6 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase MarR PF01047.22 gi|452210469|ref|YP_007490583.1| - 4.1e-12 45.8 0.0 7.6e-12 45.0 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|452210469|ref|YP_007490583.1| - 2.1e-08 34.6 0.0 3.9e-08 33.7 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|452210469|ref|YP_007490583.1| - 4.6e-08 32.8 0.0 7.5e-08 32.2 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.6 gi|452210469|ref|YP_007490583.1| - 1e-07 32.0 0.0 1.7e-07 31.3 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_24 PF13412.6 gi|452210469|ref|YP_007490583.1| - 9.7e-07 28.3 0.0 1.8e-06 27.4 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Fe_dep_repress PF01325.19 gi|452210469|ref|YP_007490583.1| - 1.8e-06 28.0 0.5 3.3e-06 27.2 0.1 1.7 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain TrmB PF01978.19 gi|452210469|ref|YP_007490583.1| - 3.6e-05 23.6 0.2 0.00011 22.0 0.1 1.8 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.20 gi|452210469|ref|YP_007490583.1| - 0.00083 19.2 0.0 0.0016 18.3 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HxlR PF01638.17 gi|452210469|ref|YP_007490583.1| - 0.0028 17.5 0.0 0.0043 16.9 0.0 1.3 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_Crp_2 PF13545.6 gi|452210469|ref|YP_007490583.1| - 0.004 17.1 0.1 0.013 15.5 0.0 1.9 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain FeoC PF09012.10 gi|452210469|ref|YP_007490583.1| - 0.0063 16.6 0.2 0.015 15.3 0.0 1.7 2 0 0 2 2 2 1 FeoC like transcriptional regulator Rrf2 PF02082.20 gi|452210469|ref|YP_007490583.1| - 0.0064 16.8 0.1 0.01 16.1 0.1 1.4 1 0 0 1 1 1 1 Transcriptional regulator HTH_IclR PF09339.10 gi|452210469|ref|YP_007490583.1| - 0.0073 16.1 0.0 0.014 15.2 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_20 PF12840.7 gi|452210469|ref|YP_007490583.1| - 0.0086 16.1 0.0 0.057 13.5 0.0 2.1 2 1 0 2 2 2 1 Helix-turn-helix domain KORA PF16509.5 gi|452210469|ref|YP_007490583.1| - 0.011 16.1 0.1 0.022 15.0 0.1 1.5 1 0 0 1 1 1 0 TrfB plasmid transcriptional repressor PadR PF03551.14 gi|452210469|ref|YP_007490583.1| - 0.012 15.6 0.0 0.031 14.2 0.0 1.7 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family HTH_45 PF14947.6 gi|452210469|ref|YP_007490583.1| - 0.032 14.2 0.1 0.069 13.2 0.0 1.6 2 0 0 2 2 1 0 Winged helix-turn-helix HTH_11 PF08279.12 gi|452210469|ref|YP_007490583.1| - 0.047 13.6 0.1 0.11 12.5 0.0 1.6 2 0 0 2 2 1 0 HTH domain HTH_1 PF00126.27 gi|452210469|ref|YP_007490583.1| - 0.063 13.2 0.0 0.13 12.2 0.0 1.6 1 1 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_36 PF13730.6 gi|452210469|ref|YP_007490583.1| - 0.064 13.2 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain DUF2250 PF10007.9 gi|452210469|ref|YP_007490583.1| - 0.08 13.1 0.0 0.17 12.0 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) DUF4423 PF14394.6 gi|452210469|ref|YP_007490583.1| - 0.12 12.1 0.1 0.22 11.2 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4423) Rhodanese PF00581.20 gi|452210470|ref|YP_007490584.1| - 1.2e-20 74.0 0.0 1.5e-20 73.7 0.0 1.1 1 0 0 1 1 1 1 Rhodanese-like domain DUF2238 PF09997.9 gi|452210472|ref|YP_007490586.1| - 0.00052 19.8 4.0 0.00098 18.9 3.9 1.6 1 1 0 1 1 1 1 Predicted membrane protein (DUF2238) DUF3180 PF11377.8 gi|452210472|ref|YP_007490586.1| - 0.067 13.3 0.3 0.13 12.4 0.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3180) DUF1129 PF06570.11 gi|452210472|ref|YP_007490586.1| - 8.4 5.8 7.1 12 5.3 7.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) DUF2769 PF10967.8 gi|452210474|ref|YP_007490588.1| - 3e-08 34.2 15.7 8.6e-07 29.5 15.4 2.6 1 1 2 3 3 3 2 Protein of unknown function (DUF2769) Whib PF02467.16 gi|452210474|ref|YP_007490588.1| - 0.0088 16.6 0.7 0.0088 16.6 0.7 2.4 2 1 0 2 2 2 1 Transcription factor WhiB Isochorismatase PF00857.20 gi|452210475|ref|YP_007490589.1| - 4.2e-36 124.7 0.0 5.2e-36 124.4 0.0 1.0 1 0 0 1 1 1 1 Isochorismatase family ICMT PF04140.14 gi|452210477|ref|YP_007490591.1| - 3.8e-20 72.1 0.2 8.2e-20 71.0 0.2 1.5 1 0 0 1 1 1 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family PEMT PF04191.13 gi|452210477|ref|YP_007490591.1| - 9.4e-15 54.9 0.2 9.4e-15 54.9 0.2 1.7 2 0 0 2 2 2 1 Phospholipid methyltransferase DUF1295 PF06966.12 gi|452210477|ref|YP_007490591.1| - 0.00048 19.7 0.4 0.00073 19.1 0.4 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1295) Na_H_Exchanger PF00999.21 gi|452210479|ref|YP_007490593.1| - 1.5e-58 198.4 50.0 2.2e-58 197.9 50.0 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.18 gi|452210479|ref|YP_007490593.1| - 6.6e-20 71.5 0.2 1.1e-19 70.8 0.2 1.4 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.21 gi|452210479|ref|YP_007490593.1| - 1.8e-10 40.5 0.0 6.9e-10 38.6 0.0 2.1 2 0 0 2 2 2 1 TrkA-C domain Maf PF02545.14 gi|452210480|ref|YP_007490594.1| - 3.2e-49 167.0 0.0 3.7e-49 166.8 0.0 1.0 1 0 0 1 1 1 1 Maf-like protein tRNA-synt_1e PF01406.19 gi|452210481|ref|YP_007490595.1| - 3.5e-106 354.9 0.0 4.9e-106 354.5 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 gi|452210481|ref|YP_007490595.1| - 3.2e-15 55.8 0.1 4.6e-07 28.9 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (M) DALR_2 PF09190.11 gi|452210481|ref|YP_007490595.1| - 3.3e-14 53.1 0.0 7.1e-14 52.0 0.0 1.6 1 0 0 1 1 1 1 DALR domain tRNA-synt_1f PF01921.18 gi|452210481|ref|YP_007490595.1| - 3.5e-12 45.9 0.0 6.5e-06 25.3 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (K) tRNA-synt_1 PF00133.22 gi|452210481|ref|YP_007490595.1| - 3.5e-09 35.5 0.0 1.9e-06 26.4 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1c PF00749.21 gi|452210481|ref|YP_007490595.1| - 0.0052 15.7 0.0 0.014 14.3 0.0 1.7 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1d PF00750.19 gi|452210481|ref|YP_007490595.1| - 0.012 14.6 0.2 0.3 10.0 0.0 2.5 2 0 0 2 2 2 0 tRNA synthetases class I (R) Lon_C PF05362.13 gi|452210483|ref|YP_007490597.1| - 1.7e-10 40.8 4.1 1.9e-09 37.3 4.1 2.1 1 1 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain DUF4763 PF15960.5 gi|452210483|ref|YP_007490597.1| - 0.0023 17.3 0.4 0.0032 16.8 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4763) MscS_porin PF12795.7 gi|452210483|ref|YP_007490597.1| - 0.0029 17.2 5.9 0.004 16.7 5.9 1.1 1 0 0 1 1 1 1 Mechanosensitive ion channel porin domain HrpB7 PF09486.10 gi|452210483|ref|YP_007490597.1| - 0.0038 17.6 0.1 0.0063 16.9 0.1 1.2 1 0 0 1 1 1 1 Bacterial type III secretion protein (HrpB7) KASH_CCD PF14662.6 gi|452210483|ref|YP_007490597.1| - 0.04 13.7 2.5 0.061 13.1 2.5 1.2 1 0 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH HemX PF04375.14 gi|452210483|ref|YP_007490597.1| - 0.042 13.1 0.5 0.056 12.7 0.5 1.1 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF3139 PF11337.8 gi|452210483|ref|YP_007490597.1| - 0.068 13.8 0.2 0.18 12.5 0.1 1.7 2 0 0 2 2 1 0 Protein of unknown function (DUF3139) Pox_A_type_inc PF04508.12 gi|452210483|ref|YP_007490597.1| - 0.09 12.7 0.1 0.8 9.7 0.0 2.2 2 0 0 2 2 2 0 Viral A-type inclusion protein repeat FPP PF05911.11 gi|452210483|ref|YP_007490597.1| - 0.11 10.6 0.9 0.15 10.2 0.9 1.0 1 0 0 1 1 1 0 Filament-like plant protein, long coiled-coil Med4 PF10018.9 gi|452210483|ref|YP_007490597.1| - 0.18 11.4 1.1 0.29 10.8 1.1 1.2 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 DivIC PF04977.15 gi|452210483|ref|YP_007490597.1| - 0.2 11.5 1.8 0.43 10.4 1.8 1.5 1 0 0 1 1 1 0 Septum formation initiator TSC22 PF01166.18 gi|452210483|ref|YP_007490597.1| - 0.45 10.9 4.9 0.47 10.8 3.4 1.8 1 1 0 1 1 1 0 TSC-22/dip/bun family bZIP_2 PF07716.15 gi|452210483|ref|YP_007490597.1| - 1.4 9.0 4.9 3.1 7.9 4.9 1.6 1 0 0 1 1 1 0 Basic region leucine zipper Metallophos_2 PF12850.7 gi|452210484|ref|YP_007490598.1| - 1.2e-06 28.8 0.0 1.8e-06 28.3 0.0 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|452210484|ref|YP_007490598.1| - 5.5e-06 27.0 0.3 7.6e-06 26.6 0.3 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Tubulin-binding PF00418.19 gi|452210484|ref|YP_007490598.1| - 0.0067 16.4 0.0 0.013 15.6 0.0 1.5 1 0 0 1 1 1 1 Tau and MAP protein, tubulin-binding repeat DNA_pol_E_B PF04042.16 gi|452210484|ref|YP_007490598.1| - 0.058 12.7 0.0 0.22 10.8 0.0 1.8 1 1 0 1 1 1 0 DNA polymerase alpha/epsilon subunit B PocR PF10114.9 gi|452210485|ref|YP_007490599.1| - 8.6e-48 162.2 0.2 3.2e-47 160.3 0.0 2.0 2 0 0 2 2 2 1 Sensory domain found in PocR HisKA_2 PF07568.12 gi|452210485|ref|YP_007490599.1| - 1.3e-30 105.3 0.8 1.3e-30 105.3 0.8 2.2 2 0 0 2 2 2 1 Histidine kinase PAS PF00989.25 gi|452210485|ref|YP_007490599.1| - 3e-16 59.4 0.0 6.7e-16 58.3 0.0 1.6 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.7 gi|452210485|ref|YP_007490599.1| - 1.5e-13 50.9 0.0 4.1e-13 49.5 0.0 1.8 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.10 gi|452210485|ref|YP_007490599.1| - 1.5e-09 38.1 0.0 2.7e-09 37.3 0.0 1.5 1 0 0 1 1 1 1 PAS fold HATPase_c PF02518.26 gi|452210485|ref|YP_007490599.1| - 6.8e-09 36.2 0.2 4.6e-08 33.5 0.2 2.3 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.7 gi|452210485|ref|YP_007490599.1| - 7.8e-08 32.2 0.0 3.8e-07 30.0 0.0 2.2 2 0 0 2 2 2 1 PAS domain PAS_3 PF08447.12 gi|452210485|ref|YP_007490599.1| - 2.2e-05 24.7 0.0 6.6e-05 23.1 0.0 1.9 1 0 0 1 1 1 1 PAS fold HATPase_c_2 PF13581.6 gi|452210485|ref|YP_007490599.1| - 2.4e-05 24.3 0.0 5.5e-05 23.1 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_7 PF12860.7 gi|452210485|ref|YP_007490599.1| - 0.00013 22.1 0.0 0.0071 16.5 0.0 3.1 2 1 0 2 2 2 1 PAS fold PAS_10 PF13596.6 gi|452210485|ref|YP_007490599.1| - 0.00043 20.8 0.0 0.0011 19.6 0.0 1.7 1 0 0 1 1 1 1 PAS domain HWE_HK PF07536.14 gi|452210485|ref|YP_007490599.1| - 0.0026 18.4 0.4 0.0085 16.8 0.4 1.9 1 1 0 1 1 1 1 HWE histidine kinase HATPase_c_3 PF13589.6 gi|452210485|ref|YP_007490599.1| - 0.057 13.3 0.0 0.13 12.1 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PknG_TPR PF16918.5 gi|452210485|ref|YP_007490599.1| - 0.073 11.8 0.0 0.12 11.1 0.0 1.3 1 0 0 1 1 1 0 Protein kinase G tetratricopeptide repeat SPOB_a PF14689.6 gi|452210485|ref|YP_007490599.1| - 0.1 12.3 0.0 0.42 10.4 0.0 2.0 2 0 0 2 2 2 0 Sensor_kinase_SpoOB-type, alpha-helical domain RP-C PF03428.13 gi|452210486|ref|YP_007490600.1| - 0.11 12.1 0.2 0.34 10.5 0.0 1.7 1 1 1 2 2 2 0 Replication protein C N-terminal domain Rho_N PF07498.12 gi|452210486|ref|YP_007490600.1| - 0.13 12.2 1.7 7.3 6.6 0.2 2.1 1 1 1 2 2 2 0 Rho termination factor, N-terminal domain tRNA-synt_2 PF00152.20 gi|452210487|ref|YP_007490601.1| - 1.6e-84 283.7 0.4 2e-84 283.4 0.4 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 gi|452210487|ref|YP_007490601.1| - 7.2e-14 51.5 0.1 1.4e-13 50.6 0.1 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 gi|452210487|ref|YP_007490601.1| - 7e-07 29.0 0.2 0.0041 16.6 0.0 2.5 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) DEAD_assoc PF08494.11 gi|452210488|ref|YP_007490602.1| - 2.7e-33 115.4 0.0 5.3e-33 114.4 0.0 1.5 1 0 0 1 1 1 1 DEAD/H associated DEAD PF00270.29 gi|452210488|ref|YP_007490602.1| - 5.8e-32 110.8 0.0 2.6e-31 108.7 0.0 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|452210488|ref|YP_007490602.1| - 2.2e-22 79.5 2.6 1.6e-19 70.2 0.0 3.9 3 1 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|452210488|ref|YP_007490602.1| - 5.3e-10 39.6 0.0 1.3e-09 38.3 0.0 1.6 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 gi|452210488|ref|YP_007490602.1| - 0.034 14.4 0.2 0.27 11.5 0.2 2.4 1 1 0 1 1 1 0 AAA domain FAT PF02259.23 gi|452210488|ref|YP_007490602.1| - 0.037 13.2 0.0 0.062 12.5 0.0 1.3 1 0 0 1 1 1 0 FAT domain T4SS-DNA_transf PF02534.14 gi|452210488|ref|YP_007490602.1| - 0.04 12.7 0.0 0.086 11.6 0.0 1.4 1 0 0 1 1 1 0 Type IV secretory system Conjugative DNA transfer UvrD-helicase PF00580.21 gi|452210488|ref|YP_007490602.1| - 0.044 13.3 0.0 0.22 11.0 0.0 2.0 2 0 0 2 2 2 0 UvrD/REP helicase N-terminal domain AAA_19 PF13245.6 gi|452210488|ref|YP_007490602.1| - 0.049 14.0 0.2 0.49 10.7 0.1 2.5 2 1 0 2 2 2 0 AAA domain AAA_25 PF13481.6 gi|452210488|ref|YP_007490602.1| - 0.069 12.7 0.0 0.25 10.9 0.0 1.9 2 1 0 2 2 2 0 AAA domain Zn-ribbon_8 PF09723.10 gi|452210488|ref|YP_007490602.1| - 0.1 12.7 0.8 0.24 11.6 0.8 1.5 1 0 0 1 1 1 0 Zinc ribbon domain SNF2_N PF00176.23 gi|452210488|ref|YP_007490602.1| - 0.11 11.2 0.0 0.16 10.6 0.0 1.2 1 0 0 1 1 1 0 SNF2 family N-terminal domain DUF1232 PF06803.12 gi|452210489|ref|YP_007490603.1| - 2.8e-12 46.2 9.5 4.6e-12 45.5 9.5 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1232) Carbpep_Y_N PF05388.11 gi|452210489|ref|YP_007490603.1| - 0.15 12.6 0.0 0.19 12.2 0.0 1.2 1 0 0 1 1 1 0 Carboxypeptidase Y pro-peptide Filamin PF00630.19 gi|452210490|ref|YP_007490604.1| - 0.00017 22.3 0.0 0.00023 21.9 0.0 1.1 1 0 0 1 1 1 1 Filamin/ABP280 repeat DUF5001 PF16392.5 gi|452210490|ref|YP_007490604.1| - 0.0019 18.1 0.0 0.0029 17.5 0.0 1.3 1 0 0 1 1 1 1 Ig-like domain BclA_C PF18573.1 gi|452210490|ref|YP_007490604.1| - 0.013 15.4 0.1 0.028 14.3 0.1 1.5 2 0 0 2 2 2 0 BclA C-terminal domain VASt PF16016.5 gi|452210490|ref|YP_007490604.1| - 0.016 15.6 0.0 0.019 15.4 0.0 1.1 1 0 0 1 1 1 0 VAD1 Analog of StAR-related lipid transfer domain PPC PF04151.15 gi|452210490|ref|YP_007490604.1| - 0.031 15.4 0.1 0.078 14.1 0.1 1.7 1 1 0 1 1 1 0 Bacterial pre-peptidase C-terminal domain HA1 PF18239.1 gi|452210490|ref|YP_007490604.1| - 0.15 12.0 0.1 0.31 10.9 0.0 1.5 1 1 0 1 1 1 0 Hemagglutinin I NosD PF05048.13 gi|452210492|ref|YP_007490606.1| - 2.9e-124 413.1 145.5 1.7e-47 161.7 34.7 5.1 2 2 3 5 5 5 5 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|452210492|ref|YP_007490606.1| - 7.4e-52 175.4 146.7 1.2e-17 64.3 26.0 6.0 2 1 4 6 6 6 6 Right handed beta helix region Acetyltransf_4 PF13420.7 gi|452210493|ref|YP_007490607.1| - 6.5e-16 58.8 0.0 7.5e-16 58.6 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|452210493|ref|YP_007490607.1| - 2.9e-14 53.3 0.0 3.5e-14 53.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.7 gi|452210493|ref|YP_007490607.1| - 2.9e-10 41.0 0.0 4e-10 40.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|452210493|ref|YP_007490607.1| - 5.6e-09 36.0 0.0 7e-09 35.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|452210493|ref|YP_007490607.1| - 1.5e-08 34.9 0.0 2.7e-08 34.1 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|452210493|ref|YP_007490607.1| - 0.0073 16.3 0.0 0.011 15.7 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 gi|452210493|ref|YP_007490607.1| - 0.033 14.3 0.0 0.077 13.1 0.0 1.6 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain TaqI_C PF12950.7 gi|452210496|ref|YP_007490610.1| - 0.001 19.1 0.0 0.0025 17.9 0.0 1.7 1 0 0 1 1 1 1 TaqI-like C-terminal specificity domain Transposase_20 PF02371.16 gi|452210497|ref|YP_007490611.1| - 8.4e-30 102.9 0.0 9.2e-30 102.8 0.0 1.0 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family 5_3_exonuc PF01367.20 gi|452210497|ref|YP_007490611.1| - 0.049 14.2 0.1 0.16 12.6 0.1 2.0 1 1 0 1 1 1 0 5'-3' exonuclease, C-terminal SAM fold HisKA_7TM PF16927.5 gi|452210498|ref|YP_007490612.1| - 2e-49 168.6 18.8 2.6e-49 168.2 18.8 1.2 1 0 0 1 1 1 1 N-terminal 7TM region of histidine kinase HATPase_c PF02518.26 gi|452210498|ref|YP_007490612.1| - 9.8e-12 45.4 0.4 2.1e-11 44.3 0.4 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS PF00989.25 gi|452210498|ref|YP_007490612.1| - 4.8e-10 39.4 0.0 1.5e-09 37.8 0.0 1.9 2 0 0 2 2 2 1 PAS fold PAS_9 PF13426.7 gi|452210498|ref|YP_007490612.1| - 5.2e-08 33.1 0.0 1.8e-07 31.3 0.0 2.0 1 1 0 1 1 1 1 PAS domain PAS_8 PF13188.7 gi|452210498|ref|YP_007490612.1| - 1.1e-06 28.5 0.0 2.6e-06 27.3 0.0 1.6 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.10 gi|452210498|ref|YP_007490612.1| - 1.1e-05 25.7 0.0 0.00019 21.7 0.0 2.4 1 1 0 1 1 1 1 PAS fold SPOB_a PF14689.6 gi|452210498|ref|YP_007490612.1| - 0.00023 20.8 0.3 0.00097 18.8 0.2 1.9 2 0 0 2 2 2 1 Sensor_kinase_SpoOB-type, alpha-helical domain HATPase_c_2 PF13581.6 gi|452210498|ref|YP_007490612.1| - 0.0033 17.4 0.0 0.0079 16.2 0.0 1.6 1 1 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.6 gi|452210498|ref|YP_007490612.1| - 0.15 11.9 0.0 0.32 10.8 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase URO-D PF01208.17 gi|452210500|ref|YP_007490614.1| - 4.2e-81 272.8 0.0 4.8e-81 272.6 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) EamA PF00892.20 gi|452210501|ref|YP_007490615.1| - 8e-31 107.0 33.0 1.6e-18 67.2 8.2 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 gi|452210501|ref|YP_007490615.1| - 1.5e-05 24.5 7.3 2e-05 24.1 7.0 1.4 1 1 0 1 1 1 1 Triose-phosphate Transporter family PUNUT PF16913.5 gi|452210501|ref|YP_007490615.1| - 0.0019 17.5 5.7 0.0019 17.5 5.7 1.6 1 1 0 1 1 1 1 Purine nucleobase transmembrane transport SLC35F PF06027.12 gi|452210501|ref|YP_007490615.1| - 0.077 12.5 13.2 0.067 12.7 4.9 2.6 1 1 1 2 2 2 0 Solute carrier family 35 YjcB PF15940.5 gi|452210501|ref|YP_007490615.1| - 0.36 11.0 8.1 0.72 10.1 0.1 3.8 3 1 1 4 4 4 0 Family of unknown function Wzy_C_2 PF11846.8 gi|452210501|ref|YP_007490615.1| - 2.1 8.2 5.0 3.4 7.6 0.3 2.5 2 1 1 3 3 3 0 Virulence factor membrane-bound polymerase, C-terminal Cupin_2 PF07883.11 gi|452210502|ref|YP_007490616.1| - 1.2e-09 37.8 0.1 2e-09 37.0 0.1 1.3 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 gi|452210502|ref|YP_007490616.1| - 4.5e-05 23.4 0.3 0.0062 16.4 0.0 2.8 3 0 0 3 3 3 1 AraC-like ligand binding domain ARD PF03079.14 gi|452210502|ref|YP_007490616.1| - 0.00011 22.4 0.5 0.00023 21.4 0.1 1.7 2 0 0 2 2 2 1 ARD/ARD' family Cupin_3 PF05899.12 gi|452210502|ref|YP_007490616.1| - 0.00061 19.4 0.1 0.0011 18.7 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_1 PF00190.22 gi|452210502|ref|YP_007490616.1| - 0.0011 18.6 0.0 0.0017 18.0 0.0 1.2 1 0 0 1 1 1 1 Cupin FliG_M PF14841.6 gi|452210502|ref|YP_007490616.1| - 0.0054 16.9 0.3 0.86 9.9 0.0 2.3 2 0 0 2 2 2 1 FliG middle domain Cupin_6 PF12852.7 gi|452210502|ref|YP_007490616.1| - 0.055 13.2 0.0 0.086 12.6 0.0 1.3 1 0 0 1 1 1 0 Cupin EutQ PF06249.12 gi|452210502|ref|YP_007490616.1| - 0.06 13.1 0.0 0.4 10.4 0.0 2.0 2 0 0 2 2 2 0 Ethanolamine utilisation protein EutQ PRA-PH PF01503.17 gi|452210502|ref|YP_007490616.1| - 0.068 13.6 0.6 0.85 10.1 0.5 2.2 2 0 0 2 2 2 0 Phosphoribosyl-ATP pyrophosphohydrolase AraC_binding_2 PF14525.6 gi|452210502|ref|YP_007490616.1| - 0.11 12.1 0.0 0.16 11.6 0.0 1.3 1 0 0 1 1 1 0 AraC-binding-like domain Acetyltransf_18 PF18014.1 gi|452210503|ref|YP_007490617.1| - 5.6e-33 113.4 0.0 5.7e-32 110.2 0.0 2.0 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|452210503|ref|YP_007490617.1| - 1.2e-10 41.7 0.1 3.6e-08 33.6 0.0 2.5 2 1 0 2 2 2 2 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|452210503|ref|YP_007490617.1| - 3.1e-08 33.6 0.0 0.00012 22.0 0.0 2.3 2 0 0 2 2 2 2 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|452210503|ref|YP_007490617.1| - 1.2e-05 25.6 0.0 3e-05 24.4 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|452210503|ref|YP_007490617.1| - 0.045 13.9 0.0 0.26 11.4 0.0 2.2 1 1 1 2 2 2 0 GCN5-related N-acetyl-transferase PD40 PF07676.12 gi|452210504|ref|YP_007490618.1| - 6.5e-09 35.5 13.5 0.71 9.9 0.1 7.1 7 1 0 7 7 7 5 WD40-like Beta Propeller Repeat DUF5050 PF16472.5 gi|452210504|ref|YP_007490618.1| - 1.2e-08 34.6 5.9 7.3e-05 22.2 4.8 2.7 1 1 1 2 2 2 2 Domain of unknown function (DUF5050) DPPIV_N PF00930.21 gi|452210504|ref|YP_007490618.1| - 7.4e-06 25.0 1.7 0.29 9.9 0.1 4.3 1 1 3 4 4 4 2 Dipeptidyl peptidase IV (DPP IV) N-terminal region DUF3155 PF11352.8 gi|452210504|ref|YP_007490618.1| - 0.0056 17.1 0.1 5 7.6 0.0 3.4 3 1 1 4 4 4 1 Protein of unknown function (DUF3155) Pectate_lyase22 PF14583.6 gi|452210504|ref|YP_007490618.1| - 0.03 13.0 0.2 0.34 9.6 0.1 2.3 2 1 0 2 2 2 0 Oligogalacturonate lyase SUKH_6 PF14568.6 gi|452210504|ref|YP_007490618.1| - 0.25 11.8 9.6 9.5 6.7 0.4 4.5 1 1 2 3 3 3 0 SMI1-KNR4 cell-wall PNGaseA PF12222.8 gi|452210504|ref|YP_007490618.1| - 0.29 10.0 3.7 1.4 7.7 0.8 2.3 1 1 0 2 2 2 0 Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A PQQ PF01011.21 gi|452210504|ref|YP_007490618.1| - 3 7.9 5.7 5.1 7.2 0.0 4.3 6 0 0 6 6 6 0 PQQ enzyme repeat zf-FLZ PF04570.14 gi|452210504|ref|YP_007490618.1| - 8.8 5.9 13.9 70 3.0 0.1 5.7 6 0 0 6 6 6 0 zinc-finger of the FCS-type, C2-C2 DUF1949 PF09186.11 gi|452210506|ref|YP_007490620.1| - 1.9e-11 43.7 0.0 2.9e-11 43.1 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1949) UPF0029 PF01205.19 gi|452210506|ref|YP_007490620.1| - 4.2e-05 23.8 0.2 7.7e-05 23.0 0.2 1.5 1 0 0 1 1 1 1 Uncharacterized protein family UPF0029 DUF5370 PF17340.2 gi|452210506|ref|YP_007490620.1| - 0.0032 17.3 2.9 0.0083 16.0 0.1 2.3 1 1 1 2 2 2 1 Family of unknown function (DUF5370) PA26 PF04636.13 gi|452210508|ref|YP_007490622.1| - 0.0051 15.8 2.3 0.0055 15.7 2.3 1.0 1 0 0 1 1 1 1 PA26 p53-induced protein (sestrin) TRAP_alpha PF03896.16 gi|452210508|ref|YP_007490622.1| - 0.0074 15.5 5.3 0.0093 15.2 5.3 1.1 1 0 0 1 1 1 1 Translocon-associated protein (TRAP), alpha subunit Spore_coat_CotO PF14153.6 gi|452210508|ref|YP_007490622.1| - 0.029 14.3 7.7 0.034 14.1 7.7 1.2 1 0 0 1 1 1 0 Spore coat protein CotO SBP_bac_3 PF00497.20 gi|452210509|ref|YP_007490623.1| - 2e-66 223.7 0.3 2.6e-66 223.3 0.3 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Lig_chan-Glu_bd PF10613.9 gi|452210509|ref|YP_007490623.1| - 9.4e-11 41.9 0.1 6.2e-09 36.1 0.0 2.6 2 1 0 2 2 2 1 Ligated ion channel L-glutamate- and glycine-binding site NMT1 PF09084.11 gi|452210509|ref|YP_007490623.1| - 0.00031 20.7 1.0 0.079 12.9 0.1 2.2 1 1 0 2 2 2 2 NMT1/THI5 like Phosphonate-bd PF12974.7 gi|452210509|ref|YP_007490623.1| - 0.0038 16.9 0.1 0.01 15.4 0.1 1.7 1 1 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein B12-binding PF02310.19 gi|452210509|ref|YP_007490623.1| - 0.07 13.2 0.1 0.3 11.1 0.1 2.1 1 1 1 2 2 2 0 B12 binding domain BPD_transp_1 PF00528.22 gi|452210510|ref|YP_007490624.1| - 4e-23 82.1 5.4 5.1e-23 81.8 5.4 1.1 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|452210511|ref|YP_007490625.1| - 1e-36 126.4 0.0 1.3e-36 126.1 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|452210511|ref|YP_007490625.1| - 2.9e-14 53.6 0.0 1.6e-07 31.5 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|452210511|ref|YP_007490625.1| - 1.3e-09 37.8 0.1 8.4e-06 25.4 0.0 2.1 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|452210511|ref|YP_007490625.1| - 1.9e-05 24.6 0.0 0.00099 18.9 0.0 2.1 1 1 1 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 gi|452210511|ref|YP_007490625.1| - 0.00033 20.4 0.0 0.00065 19.4 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|452210511|ref|YP_007490625.1| - 0.00045 20.5 0.0 0.0029 17.9 0.0 2.0 1 1 0 1 1 1 1 AAA domain AAA_13 PF13166.6 gi|452210511|ref|YP_007490625.1| - 0.00099 17.9 0.0 0.0071 15.0 0.0 1.9 2 0 0 2 2 2 1 AAA domain ABC_ATPase PF09818.9 gi|452210511|ref|YP_007490625.1| - 0.001 17.9 0.1 0.59 8.9 0.0 2.9 2 1 0 2 2 2 1 Predicted ATPase of the ABC class RsgA_GTPase PF03193.16 gi|452210511|ref|YP_007490625.1| - 0.0019 18.1 0.1 0.0029 17.5 0.1 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 gi|452210511|ref|YP_007490625.1| - 0.003 18.0 0.0 0.0032 17.9 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 gi|452210511|ref|YP_007490625.1| - 0.0039 17.7 0.0 0.0057 17.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|452210511|ref|YP_007490625.1| - 0.0093 16.5 0.0 0.019 15.5 0.0 1.6 2 0 0 2 2 1 1 AAA domain AAA_33 PF13671.6 gi|452210511|ref|YP_007490625.1| - 0.01 16.0 0.0 0.02 15.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 gi|452210511|ref|YP_007490625.1| - 0.013 14.6 0.0 0.02 14.0 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_24 PF13479.6 gi|452210511|ref|YP_007490625.1| - 0.017 14.8 0.0 0.034 13.9 0.0 1.6 2 0 0 2 2 2 0 AAA domain Rad17 PF03215.15 gi|452210511|ref|YP_007490625.1| - 0.018 14.9 0.0 0.027 14.4 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain SbcCD_C PF13558.6 gi|452210511|ref|YP_007490625.1| - 0.026 14.8 0.1 0.41 10.9 0.1 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit G-alpha PF00503.20 gi|452210511|ref|YP_007490625.1| - 0.033 13.4 0.0 0.064 12.4 0.0 1.3 1 1 0 1 1 1 0 G-protein alpha subunit AAA PF00004.29 gi|452210511|ref|YP_007490625.1| - 0.037 14.5 0.2 0.75 10.2 0.2 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 gi|452210511|ref|YP_007490625.1| - 0.039 13.7 0.0 0.054 13.2 0.0 1.5 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|452210511|ref|YP_007490625.1| - 0.041 13.8 0.0 0.079 12.9 0.0 1.4 1 0 0 1 1 1 0 NACHT domain IIGP PF05049.13 gi|452210511|ref|YP_007490625.1| - 0.059 12.4 0.1 0.082 12.0 0.1 1.2 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) AAA_25 PF13481.6 gi|452210511|ref|YP_007490625.1| - 0.059 12.9 0.0 0.18 11.4 0.0 1.7 2 0 0 2 2 2 0 AAA domain TniB PF05621.11 gi|452210511|ref|YP_007490625.1| - 0.096 12.1 0.0 2.7 7.4 0.0 2.2 2 0 0 2 2 2 0 Bacterial TniB protein IstB_IS21 PF01695.17 gi|452210511|ref|YP_007490625.1| - 0.12 12.1 0.0 0.44 10.3 0.0 1.8 2 0 0 2 2 2 0 IstB-like ATP binding protein CobU PF02283.16 gi|452210511|ref|YP_007490625.1| - 0.17 11.5 0.0 7.3 6.1 0.0 2.2 2 0 0 2 2 2 0 Cobinamide kinase / cobinamide phosphate guanyltransferase AAA_28 PF13521.6 gi|452210511|ref|YP_007490625.1| - 0.19 12.0 0.0 0.45 10.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain XdhC_CoxI PF02625.16 gi|452210511|ref|YP_007490625.1| - 0.23 11.7 0.6 17 5.7 0.0 2.8 2 1 1 3 3 3 0 XdhC and CoxI family UbiA PF01040.18 gi|452210512|ref|YP_007490626.1| - 1.6e-30 106.3 11.7 2.1e-30 105.8 11.7 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family Radical_SAM PF04055.21 gi|452210514|ref|YP_007490628.1| - 4.9e-10 40.0 0.0 7.5e-10 39.4 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily DUF1848 PF08902.11 gi|452210514|ref|YP_007490628.1| - 0.038 13.7 4.2 0.039 13.7 1.9 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF1848) Fer4_12 PF13353.6 gi|452210514|ref|YP_007490628.1| - 0.05 13.9 0.0 0.084 13.1 0.0 1.4 1 0 0 1 1 1 0 4Fe-4S single cluster domain DUF5131 PF07505.11 gi|452210514|ref|YP_007490628.1| - 0.1 12.0 0.0 0.15 11.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF5131) Fer4_14 PF13394.6 gi|452210514|ref|YP_007490628.1| - 0.14 12.3 1.9 0.26 11.4 1.9 1.7 1 1 0 1 1 1 0 4Fe-4S single cluster domain CMD PF02627.20 gi|452210515|ref|YP_007490629.1| - 0.00094 19.2 0.0 0.0012 18.8 0.0 1.3 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Glycos_transf_1 PF00534.20 gi|452210516|ref|YP_007490630.1| - 5.4e-39 133.5 0.1 1e-38 132.6 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|452210516|ref|YP_007490630.1| - 5.7e-29 101.3 0.0 1.1e-26 93.9 0.0 2.2 2 0 0 2 2 2 2 Glycosyltransferase Family 4 Glyco_trans_1_4 PF13692.6 gi|452210516|ref|YP_007490630.1| - 7e-27 94.5 0.0 2.4e-26 92.8 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|452210516|ref|YP_007490630.1| - 2.9e-21 76.5 0.0 4.4e-21 76.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 gi|452210516|ref|YP_007490630.1| - 3.1e-12 46.7 0.0 7.7e-12 45.4 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.6 gi|452210516|ref|YP_007490630.1| - 1.7e-08 34.7 0.0 3.2e-08 33.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 PIGA PF08288.12 gi|452210516|ref|YP_007490630.1| - 1.4e-06 28.8 0.0 3e-06 27.7 0.0 1.6 1 0 0 1 1 1 1 PIGA (GPI anchor biosynthesis) Glyco_transf_5 PF08323.11 gi|452210516|ref|YP_007490630.1| - 5e-05 23.1 0.0 0.00038 20.2 0.0 2.4 2 1 1 3 3 3 1 Starch synthase catalytic domain LpxK PF02606.14 gi|452210516|ref|YP_007490630.1| - 0.084 11.9 0.0 0.17 10.9 0.0 1.4 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase LPG_synthase_TM PF03706.13 gi|452210517|ref|YP_007490631.1| - 2.3e-38 132.5 31.3 2.9e-38 132.1 31.3 1.1 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region Aldo_ket_red PF00248.21 gi|452210518|ref|YP_007490632.1| - 1.3e-37 129.6 0.0 4.6e-36 124.5 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.6 gi|452210518|ref|YP_007490632.1| - 7.1e-12 45.7 9.6 1.3e-11 44.9 9.6 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452210518|ref|YP_007490632.1| - 1.2e-10 41.3 8.6 2e-10 40.7 8.6 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|452210518|ref|YP_007490632.1| - 8e-07 29.4 8.0 1.5e-06 28.6 8.0 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|452210518|ref|YP_007490632.1| - 6.7e-06 26.1 8.4 1.2e-05 25.3 8.4 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|452210518|ref|YP_007490632.1| - 7.1e-05 23.3 9.9 0.00019 21.9 10.1 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|452210518|ref|YP_007490632.1| - 0.0014 18.4 11.7 0.0032 17.2 3.3 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_22 PF17179.4 gi|452210518|ref|YP_007490632.1| - 0.0054 17.5 3.3 0.29 12.0 0.3 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|452210518|ref|YP_007490632.1| - 0.0072 16.4 6.0 0.69 10.1 0.4 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|452210518|ref|YP_007490632.1| - 0.0075 16.5 6.0 0.85 9.8 0.2 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452210518|ref|YP_007490632.1| - 0.012 16.5 9.6 0.034 15.1 9.6 1.8 1 1 0 1 1 1 0 4Fe-4S double cluster binding domain Fer4_20 PF14691.6 gi|452210518|ref|YP_007490632.1| - 0.035 13.9 8.5 0.13 12.0 2.0 2.2 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Filament_head PF04732.14 gi|452210518|ref|YP_007490632.1| - 0.18 12.7 0.0 0.33 11.8 0.0 1.4 1 0 0 1 1 1 0 Intermediate filament head (DNA binding) region Fer4_6 PF12837.7 gi|452210518|ref|YP_007490632.1| - 0.31 11.2 12.0 0.12 12.5 1.5 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_4 PF12800.7 gi|452210518|ref|YP_007490632.1| - 0.39 11.3 18.3 0.099 13.2 5.8 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_3 PF12798.7 gi|452210518|ref|YP_007490632.1| - 0.74 10.9 13.8 0.18 12.8 3.8 2.5 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.7 gi|452210518|ref|YP_007490632.1| - 7.3 6.9 18.0 1.4 9.2 4.0 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Methyltransf_31 PF13847.6 gi|452210519|ref|YP_007490633.1| - 3.5e-30 104.8 0.0 5.6e-30 104.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|452210519|ref|YP_007490633.1| - 1.3e-26 93.1 0.0 4.3e-26 91.4 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|452210519|ref|YP_007490633.1| - 2e-25 89.3 0.0 2.2e-24 86.0 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|452210519|ref|YP_007490633.1| - 5.7e-21 75.1 0.0 1e-20 74.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|452210519|ref|YP_007490633.1| - 3.1e-20 72.5 0.0 4.1e-20 72.1 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|452210519|ref|YP_007490633.1| - 7.8e-20 71.4 0.0 1e-19 71.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|452210519|ref|YP_007490633.1| - 9.1e-12 44.8 0.1 6.9e-11 41.9 0.1 2.1 1 1 0 1 1 1 1 Putative methyltransferase MTS PF05175.14 gi|452210519|ref|YP_007490633.1| - 1.5e-11 44.2 0.0 2.9e-11 43.2 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase small domain PCMT PF01135.19 gi|452210519|ref|YP_007490633.1| - 8e-08 32.3 0.0 1.2e-07 31.7 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CMAS PF02353.20 gi|452210519|ref|YP_007490633.1| - 4.6e-07 29.4 0.0 5.8e-07 29.1 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase NodS PF05401.11 gi|452210519|ref|YP_007490633.1| - 6.7e-07 29.1 0.0 9.3e-07 28.7 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) PrmA PF06325.13 gi|452210519|ref|YP_007490633.1| - 1.8e-06 27.5 0.0 4.3e-05 23.1 0.0 2.1 2 0 0 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_2 PF00891.18 gi|452210519|ref|YP_007490633.1| - 8e-06 25.3 0.0 1e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase domain TehB PF03848.14 gi|452210519|ref|YP_007490633.1| - 8.4e-06 25.3 0.0 4.1e-05 23.1 0.0 1.9 2 0 0 2 2 2 1 Tellurite resistance protein TehB TPMT PF05724.11 gi|452210519|ref|YP_007490633.1| - 1.8e-05 24.5 0.0 2.8e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_9 PF08003.11 gi|452210519|ref|YP_007490633.1| - 3.4e-05 22.9 0.0 5.4e-05 22.3 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Methyltransf_18 PF12847.7 gi|452210519|ref|YP_007490633.1| - 0.00031 20.7 0.0 0.00059 19.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 gi|452210519|ref|YP_007490633.1| - 0.00043 20.1 0.0 0.0006 19.6 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein GCD14 PF08704.10 gi|452210519|ref|YP_007490633.1| - 0.0015 18.3 0.0 0.0024 17.6 0.0 1.2 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit CheR PF01739.18 gi|452210519|ref|YP_007490633.1| - 0.0015 18.0 0.0 0.44 10.0 0.0 2.3 1 1 1 2 2 2 1 CheR methyltransferase, SAM binding domain tRNA_U5-meth_tr PF05958.11 gi|452210519|ref|YP_007490633.1| - 0.0022 17.1 0.0 0.0038 16.3 0.0 1.3 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase UPF0020 PF01170.18 gi|452210519|ref|YP_007490633.1| - 0.0029 17.3 0.0 0.0061 16.3 0.0 1.5 2 0 0 2 2 1 1 Putative RNA methylase family UPF0020 Methyltransf_24 PF13578.6 gi|452210519|ref|YP_007490633.1| - 0.006 17.6 0.0 0.014 16.4 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|452210519|ref|YP_007490633.1| - 0.0082 15.7 0.0 0.013 15.1 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW RrnaAD PF00398.20 gi|452210519|ref|YP_007490633.1| - 0.0087 15.1 0.0 0.02 14.0 0.0 1.5 1 1 0 2 2 2 1 Ribosomal RNA adenine dimethylase Methyltr_RsmB-F PF01189.17 gi|452210519|ref|YP_007490633.1| - 0.012 15.3 0.0 0.043 13.5 0.0 1.8 2 0 0 2 2 2 0 16S rRNA methyltransferase RsmB/F Methyltransf_32 PF13679.6 gi|452210519|ref|YP_007490633.1| - 0.014 15.4 0.0 0.02 14.9 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_PK PF05891.12 gi|452210519|ref|YP_007490633.1| - 0.014 14.9 0.0 0.022 14.3 0.0 1.2 1 0 0 1 1 1 0 AdoMet dependent proline di-methyltransferase ADH_zinc_N PF00107.26 gi|452210519|ref|YP_007490633.1| - 0.016 15.2 0.0 0.031 14.3 0.0 1.5 1 1 0 1 1 1 0 Zinc-binding dehydrogenase Methyltransf_15 PF09445.10 gi|452210519|ref|YP_007490633.1| - 0.023 14.3 0.0 0.034 13.7 0.0 1.3 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase NAS PF03059.16 gi|452210519|ref|YP_007490633.1| - 0.027 13.8 0.0 0.037 13.4 0.0 1.2 1 0 0 1 1 1 0 Nicotianamine synthase protein Methyltransf_8 PF05148.15 gi|452210519|ref|YP_007490633.1| - 0.029 14.2 0.0 0.056 13.3 0.0 1.4 1 0 0 1 1 1 0 Hypothetical methyltransferase N2227 PF07942.12 gi|452210519|ref|YP_007490633.1| - 0.07 12.3 0.0 5.4 6.1 0.0 2.1 1 1 1 2 2 2 0 N2227-like protein DUF938 PF06080.12 gi|452210519|ref|YP_007490633.1| - 0.089 12.5 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF938) Methyltransf_16 PF10294.9 gi|452210519|ref|YP_007490633.1| - 0.16 11.7 0.0 0.23 11.2 0.0 1.3 1 0 0 1 1 1 0 Lysine methyltransferase Catalase PF00199.19 gi|452210520|ref|YP_007490634.1| - 2.6e-180 599.6 0.1 3.4e-180 599.2 0.1 1.1 1 0 0 1 1 1 1 Catalase Catalase_C PF18011.1 gi|452210520|ref|YP_007490634.1| - 2.4e-23 82.4 0.1 3.7e-23 81.9 0.1 1.3 1 0 0 1 1 1 1 C-terminal domain found in long catalases Catalase-rel PF06628.12 gi|452210520|ref|YP_007490634.1| - 3.7e-21 75.1 0.1 9.4e-21 73.8 0.1 1.7 1 0 0 1 1 1 1 Catalase-related immune-responsive DJ-1_PfpI PF01965.24 gi|452210520|ref|YP_007490634.1| - 3.5e-18 66.0 0.2 5.1e-17 62.2 0.2 2.1 1 1 0 1 1 1 1 DJ-1/PfpI family Cation_efflux PF01545.21 gi|452210525|ref|YP_007490639.1| - 6.7e-25 88.0 7.7 2.3e-17 63.4 0.8 2.2 1 1 1 2 2 2 2 Cation efflux family ZT_dimer PF16916.5 gi|452210525|ref|YP_007490639.1| - 6.4e-20 71.1 0.2 1.3e-19 70.1 0.2 1.5 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter NifU_N PF01592.16 gi|452210526|ref|YP_007490640.1| - 1.1e-41 141.9 0.0 2e-41 141.2 0.0 1.3 1 0 0 1 1 1 1 NifU-like N terminal domain FeS_assembly_P PF01883.19 gi|452210526|ref|YP_007490640.1| - 6.5e-11 42.3 3.2 8.5e-11 41.9 1.5 2.0 2 0 0 2 2 2 1 Iron-sulfur cluster assembly protein Aminotran_5 PF00266.19 gi|452210527|ref|YP_007490641.1| - 7e-61 206.2 0.0 9.8e-61 205.7 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 gi|452210527|ref|YP_007490641.1| - 3.7e-05 23.2 0.1 7.2e-05 22.2 0.0 1.4 2 0 0 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 gi|452210527|ref|YP_007490641.1| - 0.00016 21.1 0.0 0.00023 20.5 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 gi|452210527|ref|YP_007490641.1| - 0.00082 18.0 0.1 0.0014 17.2 0.0 1.4 2 0 0 2 2 2 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 gi|452210527|ref|YP_007490641.1| - 0.0034 16.6 0.0 0.0049 16.1 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II DUF2213 PF09979.9 gi|452210527|ref|YP_007490641.1| - 0.027 14.5 0.0 0.047 13.7 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2213) SepSecS PF05889.13 gi|452210527|ref|YP_007490641.1| - 0.076 11.7 0.0 0.12 11.1 0.0 1.3 1 0 0 1 1 1 0 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS Pyridoxal_deC PF00282.19 gi|452210527|ref|YP_007490641.1| - 0.18 10.5 0.0 0.59 8.8 0.0 1.8 2 0 0 2 2 2 0 Pyridoxal-dependent decarboxylase conserved domain DrsE_2 PF13686.6 gi|452210528|ref|YP_007490642.1| - 2.9e-36 124.7 4.3 6.1e-21 74.9 0.6 2.0 1 1 1 2 2 2 2 DsrE/DsrF/DrsH-like family DrsE PF02635.15 gi|452210528|ref|YP_007490642.1| - 9.4e-07 29.2 0.0 1.4e-06 28.6 0.0 1.3 1 1 0 1 1 1 1 DsrE/DsrF-like family DUF3025 PF11227.8 gi|452210528|ref|YP_007490642.1| - 0.11 12.3 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3025) BRICHOS PF04089.14 gi|452210528|ref|YP_007490642.1| - 0.15 12.3 0.0 0.25 11.6 0.0 1.3 1 0 0 1 1 1 0 BRICHOS domain TusA PF01206.17 gi|452210529|ref|YP_007490643.1| - 5.4e-20 71.0 0.2 5.9e-20 70.9 0.2 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA HIT PF01230.23 gi|452210530|ref|YP_007490644.1| - 8.3e-32 109.8 0.0 1e-30 106.3 0.0 1.9 2 0 0 2 2 2 1 HIT domain DcpS_C PF11969.8 gi|452210530|ref|YP_007490644.1| - 9.5e-18 64.7 0.0 1.6e-17 64.0 0.0 1.4 2 0 0 2 2 2 1 Scavenger mRNA decapping enzyme C-term binding CwfJ_C_1 PF04677.15 gi|452210530|ref|YP_007490644.1| - 0.0073 16.2 0.0 0.011 15.6 0.0 1.4 1 1 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 PAS_10 PF13596.6 gi|452210530|ref|YP_007490644.1| - 0.069 13.8 0.1 0.13 12.8 0.1 1.4 1 0 0 1 1 1 0 PAS domain PQ-loop PF04193.14 gi|452210531|ref|YP_007490645.1| - 7.6e-10 38.4 0.5 1.3e-09 37.7 0.5 1.4 1 0 0 1 1 1 1 PQ loop repeat MtN3_slv PF03083.16 gi|452210531|ref|YP_007490645.1| - 2.3e-08 34.0 1.0 2.9e-08 33.7 1.0 1.3 1 1 0 1 1 1 1 Sugar efflux transporter for intercellular exchange LAB_N PF07578.11 gi|452210531|ref|YP_007490645.1| - 0.0074 16.3 0.3 0.01 15.9 0.3 1.2 1 0 0 1 1 1 1 Lipid A Biosynthesis N-terminal domain DUF3342 PF11822.8 gi|452210531|ref|YP_007490645.1| - 0.077 13.2 0.0 0.12 12.5 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3342) DUF2929 PF11151.8 gi|452210531|ref|YP_007490645.1| - 0.23 11.8 2.2 0.88 9.9 2.1 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF2929) CARDB PF07705.11 gi|452210532|ref|YP_007490646.1| - 1.6e-96 317.3 15.8 9.2e-26 90.1 0.0 4.6 4 0 0 4 4 4 4 CARDB DUF11 PF01345.18 gi|452210532|ref|YP_007490646.1| - 1.2e-06 28.7 6.5 0.25 11.6 0.2 5.1 4 3 0 4 4 4 2 Domain of unknown function DUF11 Serglycin PF04360.12 gi|452210532|ref|YP_007490646.1| - 0.016 15.1 1.5 0.042 13.8 1.5 1.6 1 0 0 1 1 1 0 Serglycin TRAP_beta PF05753.14 gi|452210532|ref|YP_007490646.1| - 0.21 10.9 1.3 16 4.8 0.0 4.0 5 1 1 6 6 6 0 Translocon-associated protein beta (TRAPB) DUF824 PF05688.11 gi|452210532|ref|YP_007490646.1| - 0.33 10.8 1.7 1.8 8.5 0.4 2.4 2 0 0 2 2 2 0 Salmonella repeat of unknown function (DUF824) NPCBM_assoc PF10633.9 gi|452210532|ref|YP_007490646.1| - 0.87 9.9 3.6 19 5.6 0.4 4.0 3 1 0 3 3 3 0 NPCBM-associated, NEW3 domain of alpha-galactosidase tRNA-synt_1b PF00579.25 gi|452210534|ref|YP_007490648.1| - 3.6e-56 190.7 0.0 4.3e-56 190.4 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) tRNA-synt_1f PF01921.18 gi|452210534|ref|YP_007490648.1| - 0.084 11.8 0.0 2.9 6.7 0.0 2.1 2 0 0 2 2 2 0 tRNA synthetases class I (K) Msg2_C PF12373.8 gi|452210534|ref|YP_007490648.1| - 0.4 10.2 1.8 0.86 9.1 1.8 1.6 1 0 0 1 1 1 0 Major surface glycoprotein 2 C terminal Thg1 PF04446.12 gi|452210535|ref|YP_007490649.1| - 3.2e-22 78.9 0.0 4.2e-22 78.5 0.0 1.2 1 0 0 1 1 1 1 tRNAHis guanylyltransferase Thg1C PF14413.6 gi|452210535|ref|YP_007490649.1| - 3.8e-07 30.3 0.1 5e-07 29.9 0.1 1.2 1 0 0 1 1 1 1 Thg1 C terminal domain PRC PF05239.16 gi|452210536|ref|YP_007490650.1| - 7.9e-06 25.9 0.9 1e-05 25.5 0.9 1.1 1 0 0 1 1 1 1 PRC-barrel domain Nre_N PF04894.12 gi|452210536|ref|YP_007490650.1| - 0.064 13.1 0.1 0.064 13.1 0.1 1.1 1 0 0 1 1 1 0 Archaeal Nre, N-terminal Ldh_1_N PF00056.23 gi|452210537|ref|YP_007490651.1| - 3.7e-38 130.8 1.7 5.8e-38 130.2 1.7 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 gi|452210537|ref|YP_007490651.1| - 1.4e-30 106.4 0.0 2.1e-30 105.9 0.0 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Glyco_hydro_4 PF02056.16 gi|452210537|ref|YP_007490651.1| - 9.4e-05 22.0 1.7 0.00032 20.3 0.2 2.2 1 1 1 2 2 2 1 Family 4 glycosyl hydrolase UDPG_MGDP_dh_N PF03721.14 gi|452210537|ref|YP_007490651.1| - 0.00099 18.7 1.0 0.0032 17.1 1.0 1.8 1 1 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ThiF PF00899.21 gi|452210537|ref|YP_007490651.1| - 0.054 12.8 0.0 0.1 11.9 0.0 1.4 1 0 0 1 1 1 0 ThiF family Shikimate_DH PF01488.20 gi|452210537|ref|YP_007490651.1| - 0.11 12.5 0.1 0.25 11.4 0.1 1.7 1 1 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase DUF2344 PF10105.9 gi|452210537|ref|YP_007490651.1| - 0.12 12.3 0.0 0.23 11.3 0.0 1.5 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2344) F420_oxidored PF03807.17 gi|452210537|ref|YP_007490651.1| - 0.2 12.3 2.5 0.33 11.6 0.2 2.5 3 1 0 3 3 3 0 NADP oxidoreductase coenzyme F420-dependent RNase_H_2 PF13482.6 gi|452210538|ref|YP_007490652.1| - 1.8e-35 122.4 0.0 2.8e-35 121.8 0.0 1.3 1 0 0 1 1 1 1 RNase_H superfamily DNA_pol_B_exo2 PF10108.9 gi|452210538|ref|YP_007490652.1| - 9.8e-05 22.1 0.0 0.45 10.2 0.0 2.2 2 0 0 2 2 2 2 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB GPI PF06560.11 gi|452210539|ref|YP_007490653.1| - 1e-47 161.8 0.0 1.3e-47 161.4 0.0 1.1 1 0 0 1 1 1 1 Glucose-6-phosphate isomerase (GPI) Cupin_2 PF07883.11 gi|452210539|ref|YP_007490653.1| - 0.00065 19.4 0.4 0.0033 17.1 0.3 2.4 2 1 0 2 2 2 1 Cupin domain Cupin_1 PF00190.22 gi|452210539|ref|YP_007490653.1| - 0.0029 17.2 0.0 0.0052 16.4 0.0 1.4 1 0 0 1 1 1 1 Cupin ARD PF03079.14 gi|452210539|ref|YP_007490653.1| - 0.085 13.0 0.2 0.29 11.3 0.0 1.9 2 0 0 2 2 2 0 ARD/ARD' family JmjC PF02373.22 gi|452210539|ref|YP_007490653.1| - 0.15 12.5 0.0 0.3 11.5 0.0 1.5 1 0 0 1 1 1 0 JmjC domain, hydroxylase Ribosomal_L9_N PF01281.19 gi|452210539|ref|YP_007490653.1| - 1.9 8.1 4.3 3 7.5 0.1 2.8 3 0 0 3 3 3 0 Ribosomal protein L9, N-terminal domain NRD1_2 PF01995.16 gi|452210540|ref|YP_007490654.1| - 3.2e-92 308.1 0.4 3.6e-92 308.0 0.4 1.0 1 0 0 1 1 1 1 NrpR regulatory domains NRD1 and 2 DHHA1 PF02272.19 gi|452210542|ref|YP_007490656.1| - 8.9e-19 68.3 1.3 2.3e-18 66.9 1.3 1.7 1 0 0 1 1 1 1 DHHA1 domain SelA PF03841.13 gi|452210542|ref|YP_007490656.1| - 0.0063 15.5 0.0 0.012 14.6 0.0 1.4 1 0 0 1 1 1 1 L-seryl-tRNA selenium transferase DHH PF01368.20 gi|452210542|ref|YP_007490656.1| - 0.1 12.8 0.1 0.2 11.9 0.1 1.4 1 0 0 1 1 1 0 DHH family Pox_G7 PF05503.12 gi|452210542|ref|YP_007490656.1| - 0.19 10.7 0.0 1 8.2 0.0 1.9 1 1 1 2 2 2 0 Poxvirus G7-like DUF1699 PF08004.11 gi|452210544|ref|YP_007490658.1| - 2.3e-61 205.2 2.1 2.6e-61 205.0 2.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) Radical_SAM_C PF16199.5 gi|452210545|ref|YP_007490659.1| - 3.9e-28 97.3 0.1 7.4e-28 96.4 0.1 1.5 1 0 0 1 1 1 1 Radical_SAM C-terminal domain Radical_SAM PF04055.21 gi|452210545|ref|YP_007490659.1| - 1.3e-17 64.7 0.0 3.7e-17 63.2 0.0 1.7 1 0 0 1 1 1 1 Radical SAM superfamily Acetyltransf_1 PF00583.25 gi|452210545|ref|YP_007490659.1| - 4e-09 36.7 0.4 1e-08 35.4 0.4 1.8 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|452210545|ref|YP_007490659.1| - 2.2e-06 27.6 0.2 5.1e-06 26.4 0.2 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|452210545|ref|YP_007490659.1| - 0.00061 20.2 0.1 0.0013 19.1 0.1 1.7 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain zinc_ribbon_4 PF13717.6 gi|452210545|ref|YP_007490659.1| - 0.012 15.6 1.4 0.025 14.5 1.4 1.5 1 0 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_5 PF13719.6 gi|452210545|ref|YP_007490659.1| - 0.018 14.8 1.7 0.062 13.1 1.7 1.8 1 0 0 1 1 1 0 zinc-ribbon domain RHH_8 PF17723.1 gi|452210545|ref|YP_007490659.1| - 0.079 13.1 0.0 0.45 10.7 0.0 2.2 2 1 1 3 3 3 0 Ribbon-Helix-Helix transcriptional regulator family S-layer PF07752.11 gi|452210547|ref|YP_007490661.1| - 9.1e-119 395.2 23.6 4.2e-78 262.0 12.5 3.1 2 1 1 3 3 3 3 S-layer protein Lum_binding PF00677.17 gi|452210547|ref|YP_007490661.1| - 0.0034 17.3 0.1 1.2 9.1 0.0 2.7 2 0 0 2 2 2 2 Lumazine binding domain PT PF04886.12 gi|452210547|ref|YP_007490661.1| - 0.062 12.8 8.7 0.11 12.0 8.7 1.3 1 0 0 1 1 1 0 PT repeat tRNA-synt_1c_C PF03950.18 gi|452210547|ref|YP_007490661.1| - 0.42 10.5 3.0 4.5 7.1 0.2 2.8 3 0 0 3 3 3 0 tRNA synthetases class I (E and Q), anti-codon binding domain DUF4367 PF14285.6 gi|452210548|ref|YP_007490662.1| - 0.0073 16.7 1.6 0.015 15.7 1.6 1.6 1 1 0 1 1 1 1 Domain of unknown function (DUF4367) Amidohydro_3 PF07969.11 gi|452210549|ref|YP_007490663.1| - 2.1e-97 327.6 0.0 2.4e-97 327.4 0.0 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_1 PF01979.20 gi|452210549|ref|YP_007490663.1| - 5.6e-05 22.6 0.0 0.0015 17.9 0.0 2.4 3 0 0 3 3 3 1 Amidohydrolase family Molybdopterin PF00384.22 gi|452210550|ref|YP_007490664.1| - 1.2e-20 73.9 0.0 7.1e-20 71.4 0.0 2.1 1 1 0 1 1 1 1 Molybdopterin oxidoreductase Molybdop_Fe4S4 PF04879.16 gi|452210550|ref|YP_007490664.1| - 0.021 14.8 0.2 0.06 13.3 0.2 1.7 1 0 0 1 1 1 0 Molybdopterin oxidoreductase Fe4S4 domain Molydop_binding PF01568.21 gi|452210551|ref|YP_007490665.1| - 2.4e-13 50.1 0.0 3.3e-13 49.6 0.0 1.1 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Alkyl_sulf_dimr PF14863.6 gi|452210552|ref|YP_007490666.1| - 1.2e-31 110.0 0.1 2.3e-31 109.1 0.1 1.5 1 0 0 1 1 1 1 Alkyl sulfatase dimerisation Alkyl_sulf_C PF14864.6 gi|452210552|ref|YP_007490666.1| - 1.1e-12 48.3 0.2 2.1e-12 47.4 0.2 1.5 1 0 0 1 1 1 1 Alkyl sulfatase C-terminal Lactamase_B PF00753.27 gi|452210552|ref|YP_007490666.1| - 5.8e-12 46.0 0.2 1.3e-11 44.9 0.2 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily SCP2 PF02036.17 gi|452210552|ref|YP_007490666.1| - 8.5e-10 39.0 0.1 3.1e-09 37.2 0.0 1.9 2 0 0 2 2 2 1 SCP-2 sterol transfer family Lactamase_B_2 PF12706.7 gi|452210552|ref|YP_007490666.1| - 0.0061 16.1 0.2 0.012 15.2 0.2 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain PKD PF00801.20 gi|452210553|ref|YP_007490667.1| - 1.1e-65 217.4 73.5 4.4e-09 36.1 2.2 11.1 10 0 0 10 10 10 9 PKD domain Big_1 PF02369.16 gi|452210553|ref|YP_007490667.1| - 5.3e-09 36.0 1.3 5.3e-09 36.0 1.3 5.5 7 0 0 7 7 7 1 Bacterial Ig-like domain (group 1) Invasin_D3 PF09134.10 gi|452210553|ref|YP_007490667.1| - 0.027 14.8 0.7 0.027 14.8 0.7 8.7 10 0 0 10 10 10 0 Invasin, domain 3 bMG10 PF17973.1 gi|452210553|ref|YP_007490667.1| - 0.04 14.1 0.0 0.12 12.5 0.0 1.8 1 0 0 1 1 1 0 Bacterial Alpha-2-macroglobulin MG10 domain PKD_3 PF16820.5 gi|452210553|ref|YP_007490667.1| - 2.7 7.8 27.7 8.4 6.2 0.0 8.6 9 0 0 9 9 9 0 PKD-like domain Ig_5 PF16681.5 gi|452210554|ref|YP_007490668.1| - 0.016 15.6 0.1 0.016 15.6 0.1 1.1 1 0 0 1 1 1 0 Ig-like domain on T-cell surface glycoprotein CD3 epsilon chain Hemerythrin PF01814.23 gi|452210555|ref|YP_007490669.1| - 6.8e-15 55.8 6.0 9.4e-15 55.4 6.0 1.2 1 0 0 1 1 1 1 Hemerythrin HHE cation binding domain OmpH PF03938.14 gi|452210555|ref|YP_007490669.1| - 0.022 15.1 5.9 0.047 14.0 5.9 1.5 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Seryl_tRNA_N PF02403.22 gi|452210555|ref|YP_007490669.1| - 0.18 12.0 11.6 0.4 10.9 9.8 2.2 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain DUF349 PF03993.12 gi|452210555|ref|YP_007490669.1| - 8.1 6.8 13.3 5.3 7.4 2.9 3.0 2 1 0 2 2 2 0 Domain of Unknown Function (DUF349) Hemerythrin PF01814.23 gi|452210556|ref|YP_007490670.1| - 1.2e-13 51.8 6.6 2.1e-13 51.0 6.6 1.4 1 0 0 1 1 1 1 Hemerythrin HHE cation binding domain PRA-PH PF01503.17 gi|452210556|ref|YP_007490670.1| - 0.99 9.9 5.2 0.52 10.8 1.0 2.2 2 0 0 2 2 2 0 Phosphoribosyl-ATP pyrophosphohydrolase PhoU PF01895.19 gi|452210557|ref|YP_007490671.1| - 1.2e-22 80.2 13.1 2.6e-20 72.7 2.0 3.4 3 1 0 3 3 3 2 PhoU domain MazE_antitoxin PF04014.18 gi|452210557|ref|YP_007490671.1| - 0.00034 20.5 0.0 0.00088 19.1 0.0 1.7 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin KORA PF16509.5 gi|452210557|ref|YP_007490671.1| - 0.037 14.3 0.4 39 4.6 0.0 3.3 3 0 0 3 3 3 0 TrfB plasmid transcriptional repressor HAMP PF00672.25 gi|452210557|ref|YP_007490671.1| - 0.058 13.8 0.1 4.5 7.7 0.0 2.7 2 0 0 2 2 2 0 HAMP domain HTH_29 PF13551.6 gi|452210559|ref|YP_007490673.1| - 0.14 12.2 0.0 0.19 11.8 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn helix Alph_Pro_TM PF09608.10 gi|452210560|ref|YP_007490674.1| - 0.0029 17.5 0.0 0.0063 16.4 0.0 1.4 1 1 0 1 1 1 1 Putative transmembrane protein (Alph_Pro_TM) DUF3324 PF11797.8 gi|452210560|ref|YP_007490674.1| - 0.0087 16.0 0.0 0.011 15.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function C-terminal (DUF3324) DUF2135 PF09906.9 gi|452210560|ref|YP_007490674.1| - 0.1 12.9 0.0 0.26 11.6 0.0 1.6 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2135) DUF4832 PF16116.5 gi|452210561|ref|YP_007490675.1| - 0.00019 21.3 0.5 0.00068 19.6 0.2 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF4832) CARDB PF07705.11 gi|452210561|ref|YP_007490675.1| - 0.0012 19.0 2.5 0.0019 18.4 0.5 2.1 2 0 0 2 2 2 1 CARDB Integrin_alpha2 PF08441.12 gi|452210561|ref|YP_007490675.1| - 0.002 17.1 0.2 0.0029 16.6 0.2 1.1 1 0 0 1 1 1 1 Integrin alpha DUF1659 PF07872.11 gi|452210561|ref|YP_007490675.1| - 0.0071 16.0 0.1 0.016 14.9 0.1 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1659) DUF2393 PF09624.10 gi|452210561|ref|YP_007490675.1| - 0.12 12.3 1.9 4.6 7.2 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2393) CtaG_Cox11 PF04442.14 gi|452210561|ref|YP_007490675.1| - 0.14 12.2 0.1 0.29 11.1 0.1 1.6 1 0 0 1 1 1 0 Cytochrome c oxidase assembly protein CtaG/Cox11 DUF4843 PF16132.5 gi|452210561|ref|YP_007490675.1| - 0.45 10.1 2.5 0.45 10.1 0.1 2.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4843) ABC2_membrane PF01061.24 gi|452210562|ref|YP_007490676.1| - 5.1e-31 107.7 18.4 7.8e-31 107.1 18.4 1.3 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|452210562|ref|YP_007490676.1| - 4.6e-12 45.7 23.0 5.5e-12 45.5 23.0 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC_tran PF00005.27 gi|452210563|ref|YP_007490677.1| - 6.4e-29 101.2 0.0 1e-28 100.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|452210563|ref|YP_007490677.1| - 2.5e-09 37.4 0.0 1e-05 25.5 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|452210563|ref|YP_007490677.1| - 4e-05 24.2 0.0 8.3e-05 23.2 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|452210563|ref|YP_007490677.1| - 0.00046 20.0 0.1 0.0012 18.7 0.0 1.7 2 1 1 3 3 3 1 AAA ATPase domain AAA_29 PF13555.6 gi|452210563|ref|YP_007490677.1| - 0.00055 19.6 0.1 0.0019 17.9 0.1 1.8 2 0 0 2 2 2 1 P-loop containing region of AAA domain KdpD PF02702.17 gi|452210563|ref|YP_007490677.1| - 0.0054 16.2 0.0 0.013 15.0 0.0 1.5 1 1 0 2 2 2 1 Osmosensitive K+ channel His kinase sensor domain MukB PF04310.12 gi|452210563|ref|YP_007490677.1| - 0.021 14.6 0.2 0.052 13.4 0.2 1.7 1 1 0 1 1 1 0 MukB N-terminal SMC_N PF02463.19 gi|452210563|ref|YP_007490677.1| - 0.029 13.8 0.0 0.31 10.4 0.0 2.1 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain AAA_27 PF13514.6 gi|452210563|ref|YP_007490677.1| - 0.033 13.8 0.1 0.12 12.0 0.0 1.8 1 1 1 2 2 2 0 AAA domain Thymidylate_kin PF02223.17 gi|452210563|ref|YP_007490677.1| - 0.051 13.3 0.0 0.3 10.7 0.0 1.9 1 1 0 1 1 1 0 Thymidylate kinase AAA_PrkA PF08298.11 gi|452210563|ref|YP_007490677.1| - 0.074 12.0 0.0 0.13 11.2 0.0 1.4 1 0 0 1 1 1 0 PrkA AAA domain RsgA_GTPase PF03193.16 gi|452210563|ref|YP_007490677.1| - 0.11 12.4 0.0 0.19 11.6 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase CbiQ PF02361.16 gi|452210564|ref|YP_007490678.1| - 4.4e-24 85.3 10.8 4.4e-24 85.3 10.8 1.5 2 0 0 2 2 2 1 Cobalt transport protein ABC_tran PF00005.27 gi|452210565|ref|YP_007490679.1| - 1.5e-54 184.2 0.1 1.2e-26 93.9 0.1 2.3 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 gi|452210565|ref|YP_007490679.1| - 8.2e-11 42.3 3.8 0.0022 17.9 0.1 4.3 2 2 0 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|452210565|ref|YP_007490679.1| - 1.3e-10 40.9 0.4 0.00058 19.5 0.1 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain SMC_N PF02463.19 gi|452210565|ref|YP_007490679.1| - 3.3e-10 39.8 1.0 0.00086 18.8 0.1 3.1 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|452210565|ref|YP_007490679.1| - 1.5e-09 38.5 0.2 0.0013 19.1 0.1 2.5 2 1 0 2 2 2 2 AAA ATPase domain AAA_25 PF13481.6 gi|452210565|ref|YP_007490679.1| - 6.5e-09 35.6 0.2 0.016 14.8 0.0 3.2 3 0 0 3 3 3 2 AAA domain AAA_22 PF13401.6 gi|452210565|ref|YP_007490679.1| - 3.1e-07 30.7 2.4 0.0032 17.7 0.8 3.1 2 2 0 2 2 2 2 AAA domain T2SSE PF00437.20 gi|452210565|ref|YP_007490679.1| - 5.2e-07 29.0 0.0 0.00088 18.4 0.0 2.4 2 0 0 2 2 2 2 Type II/IV secretion system protein AAA_23 PF13476.6 gi|452210565|ref|YP_007490679.1| - 9.8e-07 29.5 0.0 0.0017 18.9 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.6 gi|452210565|ref|YP_007490679.1| - 1.4e-06 28.8 0.8 0.096 13.2 0.0 2.9 3 0 0 3 3 2 2 AAA domain RsgA_GTPase PF03193.16 gi|452210565|ref|YP_007490679.1| - 8.4e-06 25.8 0.8 0.014 15.3 0.1 2.6 2 0 0 2 2 2 2 RsgA GTPase AAA_28 PF13521.6 gi|452210565|ref|YP_007490679.1| - 8.5e-06 26.1 0.9 0.11 12.8 0.0 2.7 2 0 0 2 2 2 2 AAA domain AAA_7 PF12775.7 gi|452210565|ref|YP_007490679.1| - 2.2e-05 24.0 0.3 0.0087 15.6 0.0 2.3 2 0 0 2 2 2 1 P-loop containing dynein motor region Mg_chelatase PF01078.21 gi|452210565|ref|YP_007490679.1| - 3.7e-05 23.2 0.2 0.0033 16.8 0.0 2.4 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI NACHT PF05729.12 gi|452210565|ref|YP_007490679.1| - 4e-05 23.6 0.2 0.32 10.9 0.0 2.5 2 0 0 2 2 2 2 NACHT domain SbcCD_C PF13558.6 gi|452210565|ref|YP_007490679.1| - 6e-05 23.2 0.1 1.2 9.4 0.1 3.1 2 1 0 2 2 2 2 Putative exonuclease SbcCD, C subunit ATPase_2 PF01637.18 gi|452210565|ref|YP_007490679.1| - 0.00016 21.7 0.0 0.093 12.6 0.0 2.3 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_30 PF13604.6 gi|452210565|ref|YP_007490679.1| - 0.00017 21.4 0.1 0.18 11.5 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_5 PF07728.14 gi|452210565|ref|YP_007490679.1| - 0.00018 21.5 0.5 0.14 12.2 0.1 2.4 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) NTPase_1 PF03266.15 gi|452210565|ref|YP_007490679.1| - 0.00018 21.5 0.2 0.71 9.8 0.2 2.6 2 0 0 2 2 2 2 NTPase PC4 PF02229.16 gi|452210565|ref|YP_007490679.1| - 0.00018 21.1 0.4 0.0098 15.5 0.2 2.4 2 0 0 2 2 2 1 Transcriptional Coactivator p15 (PC4) AAA_15 PF13175.6 gi|452210565|ref|YP_007490679.1| - 0.00019 21.3 0.5 0.21 11.3 0.0 2.4 2 0 0 2 2 2 2 AAA ATPase domain RNA_helicase PF00910.22 gi|452210565|ref|YP_007490679.1| - 0.00021 21.6 0.2 0.21 12.0 0.0 2.8 3 0 0 3 3 2 1 RNA helicase Rad17 PF03215.15 gi|452210565|ref|YP_007490679.1| - 0.00028 20.9 0.1 0.002 18.1 0.1 2.1 2 0 0 2 2 2 1 Rad17 P-loop domain AAA_14 PF13173.6 gi|452210565|ref|YP_007490679.1| - 0.00033 20.7 0.1 0.36 10.9 0.0 2.6 2 1 0 2 2 2 1 AAA domain Zeta_toxin PF06414.12 gi|452210565|ref|YP_007490679.1| - 0.00041 19.7 0.0 0.2 10.9 0.0 2.3 2 0 0 2 2 2 1 Zeta toxin MeaB PF03308.16 gi|452210565|ref|YP_007490679.1| - 0.00057 18.9 0.2 0.039 12.9 0.0 2.4 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB MMR_HSR1 PF01926.23 gi|452210565|ref|YP_007490679.1| - 0.00088 19.3 1.7 1.6 8.8 0.2 3.1 2 1 0 2 2 2 2 50S ribosome-binding GTPase AAA_33 PF13671.6 gi|452210565|ref|YP_007490679.1| - 0.0013 18.9 0.9 2.3 8.4 0.1 2.6 2 1 0 2 2 2 2 AAA domain AAA_24 PF13479.6 gi|452210565|ref|YP_007490679.1| - 0.0015 18.3 0.7 1.3 8.8 0.1 2.5 2 0 0 2 2 2 1 AAA domain FtsK_SpoIIIE PF01580.18 gi|452210565|ref|YP_007490679.1| - 0.0016 17.8 0.5 0.37 10.1 0.0 2.3 2 0 0 2 2 2 1 FtsK/SpoIIIE family AAA PF00004.29 gi|452210565|ref|YP_007490679.1| - 0.0025 18.3 1.9 0.11 12.9 0.1 2.9 3 1 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) DAP3 PF10236.9 gi|452210565|ref|YP_007490679.1| - 0.0043 16.3 1.3 1.1 8.3 0.1 2.3 2 0 0 2 2 2 1 Mitochondrial ribosomal death-associated protein 3 ATPase PF06745.13 gi|452210565|ref|YP_007490679.1| - 0.0052 16.2 5.1 2.5 7.4 0.1 3.7 4 0 0 4 4 3 1 KaiC Viral_helicase1 PF01443.18 gi|452210565|ref|YP_007490679.1| - 0.0056 16.4 0.4 3.1 7.5 0.0 2.2 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase SRP54 PF00448.22 gi|452210565|ref|YP_007490679.1| - 0.0061 16.2 0.5 0.27 10.8 0.1 2.5 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain PduV-EutP PF10662.9 gi|452210565|ref|YP_007490679.1| - 0.0081 15.9 0.2 1.3 8.8 0.0 2.6 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation ABC_ATPase PF09818.9 gi|452210565|ref|YP_007490679.1| - 0.0094 14.8 2.0 4 6.1 0.1 3.1 3 0 0 3 3 3 0 Predicted ATPase of the ABC class ATP_bind_1 PF03029.17 gi|452210565|ref|YP_007490679.1| - 0.013 15.3 0.4 2.7 7.7 0.0 2.4 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein PIF1 PF05970.14 gi|452210565|ref|YP_007490679.1| - 0.015 14.5 0.2 0.9 8.6 0.1 2.2 2 0 0 2 2 2 0 PIF1-like helicase NB-ARC PF00931.22 gi|452210565|ref|YP_007490679.1| - 0.017 14.3 1.5 0.99 8.5 0.1 2.5 3 0 0 3 3 3 0 NB-ARC domain G-alpha PF00503.20 gi|452210565|ref|YP_007490679.1| - 0.019 14.2 0.5 3.9 6.5 0.1 2.3 2 0 0 2 2 2 0 G-protein alpha subunit IstB_IS21 PF01695.17 gi|452210565|ref|YP_007490679.1| - 0.02 14.6 0.1 2.8 7.6 0.0 2.5 2 0 0 2 2 2 0 IstB-like ATP binding protein DUF815 PF05673.13 gi|452210565|ref|YP_007490679.1| - 0.028 13.6 0.2 0.64 9.1 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF815) TsaE PF02367.17 gi|452210565|ref|YP_007490679.1| - 0.048 13.7 0.4 1.3 9.0 0.1 2.3 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE TniB PF05621.11 gi|452210565|ref|YP_007490679.1| - 0.058 12.8 3.1 2.7 7.3 0.1 3.4 4 0 0 4 4 4 0 Bacterial TniB protein cobW PF02492.19 gi|452210565|ref|YP_007490679.1| - 0.065 12.8 5.0 1.8 8.1 0.1 2.7 3 0 0 3 3 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_19 PF13245.6 gi|452210565|ref|YP_007490679.1| - 0.072 13.4 0.4 11 6.3 0.1 2.5 2 0 0 2 2 2 0 AAA domain TrwB_AAD_bind PF10412.9 gi|452210565|ref|YP_007490679.1| - 0.075 11.9 0.7 2.2 7.1 0.0 2.2 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain PRK PF00485.18 gi|452210565|ref|YP_007490679.1| - 0.076 12.7 0.2 4.3 7.0 0.1 2.5 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family AAA_27 PF13514.6 gi|452210565|ref|YP_007490679.1| - 0.083 12.5 0.1 9.1 5.8 0.0 2.3 2 0 0 2 2 2 0 AAA domain Adeno_IVa2 PF02456.15 gi|452210565|ref|YP_007490679.1| - 0.094 11.5 0.1 1 8.1 0.0 2.1 2 0 0 2 2 2 0 Adenovirus IVa2 protein Fer4_NifH PF00142.18 gi|452210565|ref|YP_007490679.1| - 0.13 11.7 0.0 0.25 10.7 0.0 1.5 1 0 0 1 1 1 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family dNK PF01712.19 gi|452210565|ref|YP_007490679.1| - 0.13 12.1 0.1 7.1 6.4 0.1 2.2 2 0 0 2 2 2 0 Deoxynucleoside kinase DUF87 PF01935.17 gi|452210565|ref|YP_007490679.1| - 0.15 12.1 0.8 5.4 7.0 0.0 2.5 2 0 0 2 2 2 0 Helicase HerA, central domain DLIC PF05783.11 gi|452210565|ref|YP_007490679.1| - 0.19 10.5 0.3 4.9 5.9 0.0 2.1 2 0 0 2 2 2 0 Dynein light intermediate chain (DLIC) IIGP PF05049.13 gi|452210565|ref|YP_007490679.1| - 0.21 10.6 0.3 8.6 5.3 0.1 2.4 2 0 0 2 2 2 0 Interferon-inducible GTPase (IIGP) CbiA PF01656.23 gi|452210565|ref|YP_007490679.1| - 0.3 11.2 2.8 0.3 11.1 0.1 2.5 3 1 0 3 3 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain DUF3584 PF12128.8 gi|452210565|ref|YP_007490679.1| - 0.3 8.6 0.2 0.44 8.0 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Dynamin_N PF00350.23 gi|452210565|ref|YP_007490679.1| - 0.54 10.3 1.9 17 5.4 0.1 2.5 2 0 0 2 2 2 0 Dynamin family DUF4625 PF15418.6 gi|452210566|ref|YP_007490680.1| - 0.027 14.7 0.0 0.053 13.8 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4625) NPCBM_assoc PF10633.9 gi|452210566|ref|YP_007490680.1| - 0.042 14.1 0.0 8.1 6.8 0.0 2.6 2 1 0 2 2 2 0 NPCBM-associated, NEW3 domain of alpha-galactosidase CobN-Mg_chel PF02514.16 gi|452210567|ref|YP_007490681.1| - 0 1241.4 0.0 0 1241.2 0.0 1.0 1 0 0 1 1 1 1 CobN/Magnesium Chelatase PQQ_2 PF13360.6 gi|452210568|ref|YP_007490682.1| - 1.6e-10 40.9 0.0 0.0028 17.3 0.0 3.3 2 1 1 3 3 3 3 PQQ-like domain PQQ PF01011.21 gi|452210568|ref|YP_007490682.1| - 3.2e-10 39.5 0.3 0.0023 17.8 0.0 6.0 6 0 0 6 6 6 2 PQQ enzyme repeat PQQ_3 PF13570.6 gi|452210568|ref|YP_007490682.1| - 2.8e-07 30.8 8.0 0.13 12.8 0.0 7.0 6 1 1 7 7 7 2 PQQ-like domain WD40 PF00400.32 gi|452210568|ref|YP_007490682.1| - 5.7e-06 27.0 0.7 0.1 13.5 0.0 4.8 5 0 0 5 5 5 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 gi|452210568|ref|YP_007490682.1| - 0.0029 17.9 0.0 0.061 13.6 0.0 2.8 2 1 1 3 3 3 1 Anaphase-promoting complex subunit 4 WD40 domain DUF5122 PF17164.4 gi|452210568|ref|YP_007490682.1| - 0.005 17.1 2.4 2.5 8.5 0.1 3.8 3 0 0 3 3 3 1 Domain of unknown function (DUF5122) beta-propeller S-layer PF07752.11 gi|452210571|ref|YP_007490685.1| - 8.5e-71 238.0 4.6 4.1e-46 157.1 0.0 3.1 2 1 1 3 3 3 3 S-layer protein AAA_lid_2 PF17863.1 gi|452210572|ref|YP_007490686.1| - 1e-22 79.7 0.0 2.6e-22 78.4 0.0 1.7 1 0 0 1 1 1 1 AAA lid domain Mg_chelatase PF01078.21 gi|452210572|ref|YP_007490686.1| - 3.5e-13 49.4 0.1 4.3e-09 36.1 0.0 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI VWA_2 PF13519.6 gi|452210572|ref|YP_007490686.1| - 1.7e-12 47.9 0.0 4.4e-12 46.6 0.0 1.7 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 gi|452210572|ref|YP_007490686.1| - 5.6e-10 39.7 0.0 1.2e-09 38.7 0.0 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain AAA_5 PF07728.14 gi|452210572|ref|YP_007490686.1| - 9.6e-10 38.6 0.2 7.5e-06 26.0 0.0 2.8 3 0 0 3 3 3 2 AAA domain (dynein-related subfamily) MCM PF00493.23 gi|452210572|ref|YP_007490686.1| - 5.3e-07 29.0 0.1 0.00034 19.8 0.0 2.9 2 1 0 2 2 2 2 MCM P-loop domain Sigma54_activat PF00158.26 gi|452210572|ref|YP_007490686.1| - 0.00087 19.0 0.1 0.22 11.2 0.0 2.3 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_3 PF07726.11 gi|452210572|ref|YP_007490686.1| - 0.0054 16.6 0.0 0.27 11.1 0.0 2.6 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) RR_TM4-6 PF06459.12 gi|452210572|ref|YP_007490686.1| - 0.0072 16.2 11.6 0.011 15.5 11.6 1.2 1 0 0 1 1 1 1 Ryanodine Receptor TM 4-6 AAA_22 PF13401.6 gi|452210572|ref|YP_007490686.1| - 0.01 16.1 0.0 0.03 14.6 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|452210572|ref|YP_007490686.1| - 0.017 15.5 0.3 0.085 13.2 0.0 2.3 2 1 0 2 2 2 0 AAA ATPase domain AAA PF00004.29 gi|452210572|ref|YP_007490686.1| - 0.038 14.4 0.0 0.19 12.2 0.0 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Gp_dh_C PF02800.20 gi|452210572|ref|YP_007490686.1| - 0.068 12.8 0.0 0.14 11.7 0.0 1.5 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Tim54 PF11711.8 gi|452210572|ref|YP_007490686.1| - 0.47 9.2 9.1 0.73 8.5 9.1 1.3 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 Hid1 PF12722.7 gi|452210572|ref|YP_007490686.1| - 3.6 5.6 13.2 5.1 5.1 13.2 1.1 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein ALMT PF11744.8 gi|452210572|ref|YP_007490686.1| - 8.4 5.1 8.8 12 4.6 8.8 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter DNA_pol_B PF00136.21 gi|452210573|ref|YP_007490687.1| - 5.4e-106 355.0 0.0 7.8e-106 354.5 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.19 gi|452210573|ref|YP_007490687.1| - 2.2e-51 175.0 0.0 3.9e-51 174.2 0.0 1.3 1 0 0 1 1 1 1 DNA polymerase family B, exonuclease domain DNA_pol_B_exo2 PF10108.9 gi|452210573|ref|YP_007490687.1| - 0.0031 17.2 0.0 0.0064 16.2 0.0 1.4 1 0 0 1 1 1 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB DNA_pol_B_2 PF03175.13 gi|452210573|ref|YP_007490687.1| - 0.1 11.4 0.1 0.52 9.1 0.0 1.9 2 0 0 2 2 2 0 DNA polymerase type B, organellar and viral PBP_like_2 PF12849.7 gi|452210574|ref|YP_007490688.1| - 8e-47 160.2 0.7 1.5e-46 159.3 0.7 1.4 1 1 0 1 1 1 1 PBP superfamily domain PBP_like PF12727.7 gi|452210574|ref|YP_007490688.1| - 2.1e-23 82.5 0.1 2.9e-23 82.0 0.1 1.1 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_11 PF13531.6 gi|452210574|ref|YP_007490688.1| - 2.8e-07 30.5 0.0 1.5e-06 28.1 0.0 1.9 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|452210574|ref|YP_007490688.1| - 0.081 12.9 0.3 0.26 11.2 0.3 1.9 1 1 0 1 1 1 0 Bacterial extracellular solute-binding protein BPD_transp_1 PF00528.22 gi|452210575|ref|YP_007490689.1| - 2.7e-21 76.1 20.7 2.7e-21 76.1 20.7 2.2 1 1 2 3 3 3 1 Binding-protein-dependent transport system inner membrane component SHR3_chaperone PF08229.11 gi|452210575|ref|YP_007490689.1| - 0.18 10.7 2.1 0.47 9.4 0.2 2.3 2 0 0 2 2 2 0 ER membrane protein SH3 BPD_transp_1 PF00528.22 gi|452210576|ref|YP_007490690.1| - 3.3e-26 92.1 14.1 3.3e-26 92.1 14.1 2.5 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component Peptidase_M48_N PF16491.5 gi|452210576|ref|YP_007490690.1| - 4.7 7.1 12.7 0.3 11.0 4.4 2.5 2 1 1 3 3 3 0 CAAX prenyl protease N-terminal, five membrane helices DUF3333 PF11812.8 gi|452210576|ref|YP_007490690.1| - 6 7.0 7.3 0.17 12.1 0.7 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3333) TssN PF17555.2 gi|452210576|ref|YP_007490690.1| - 6.3 6.1 13.1 0.57 9.5 0.7 3.3 3 1 1 4 4 4 0 Type VI secretion system, TssN ABC_tran PF00005.27 gi|452210577|ref|YP_007490691.1| - 2.7e-30 105.7 0.0 3.8e-30 105.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|452210577|ref|YP_007490691.1| - 2.1e-09 37.6 0.0 3.3e-06 27.1 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|452210577|ref|YP_007490691.1| - 3.6e-08 33.1 0.1 2.1e-06 27.4 0.1 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_25 PF13481.6 gi|452210577|ref|YP_007490691.1| - 9.4e-05 22.1 0.0 0.00018 21.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain ATPase PF06745.13 gi|452210577|ref|YP_007490691.1| - 0.00087 18.7 0.0 0.0018 17.7 0.0 1.5 2 0 0 2 2 2 1 KaiC AAA_29 PF13555.6 gi|452210577|ref|YP_007490691.1| - 0.0014 18.3 0.0 0.0027 17.4 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain Rad17 PF03215.15 gi|452210577|ref|YP_007490691.1| - 0.0026 17.7 0.0 0.0047 16.9 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain RsgA_GTPase PF03193.16 gi|452210577|ref|YP_007490691.1| - 0.0069 16.3 0.0 0.012 15.5 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA PF00004.29 gi|452210577|ref|YP_007490691.1| - 0.0078 16.6 0.0 0.092 13.2 0.0 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Zot PF05707.12 gi|452210577|ref|YP_007490691.1| - 0.011 15.4 0.0 0.75 9.4 0.0 2.2 1 1 0 1 1 1 0 Zonular occludens toxin (Zot) AAA_22 PF13401.6 gi|452210577|ref|YP_007490691.1| - 0.017 15.4 0.0 0.047 14.0 0.0 1.7 2 0 0 2 2 2 0 AAA domain IstB_IS21 PF01695.17 gi|452210577|ref|YP_007490691.1| - 0.023 14.4 0.0 0.066 12.9 0.0 1.7 2 0 0 2 2 2 0 IstB-like ATP binding protein PPV_E1_C PF00519.17 gi|452210577|ref|YP_007490691.1| - 0.024 13.5 0.0 0.035 12.9 0.0 1.2 1 0 0 1 1 1 0 Papillomavirus helicase AAA_15 PF13175.6 gi|452210577|ref|YP_007490691.1| - 0.028 14.2 0.1 0.15 11.7 0.1 1.9 1 1 1 2 2 2 0 AAA ATPase domain AAA_33 PF13671.6 gi|452210577|ref|YP_007490691.1| - 0.054 13.6 0.0 0.066 13.4 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|452210577|ref|YP_007490691.1| - 0.074 13.4 0.1 0.15 12.4 0.1 1.8 1 1 0 1 1 1 0 AAA ATPase domain AAA_14 PF13173.6 gi|452210577|ref|YP_007490691.1| - 0.1 12.6 0.0 0.23 11.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|452210577|ref|YP_007490691.1| - 0.13 12.0 0.0 0.3 10.8 0.0 1.6 2 0 0 2 2 2 0 AAA domain PhoU PF01895.19 gi|452210578|ref|YP_007490692.1| - 1.9e-36 124.4 7.7 3.4e-20 72.3 1.5 2.1 2 0 0 2 2 2 2 PhoU domain Amidohydro_1 PF01979.20 gi|452210579|ref|YP_007490693.1| - 1e-22 81.0 0.0 1.3e-22 80.6 0.0 1.2 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|452210579|ref|YP_007490693.1| - 7.2e-14 52.1 0.0 5.7e-06 26.1 0.0 2.3 2 0 0 2 2 2 2 Amidohydrolase family KH_1 PF00013.29 gi|452210580|ref|YP_007490694.1| - 1.7e-10 40.5 4.9 4.9e-07 29.5 0.6 2.3 2 0 0 2 2 2 2 KH domain KH_2 PF07650.17 gi|452210580|ref|YP_007490694.1| - 0.0032 17.2 2.9 1.1 9.1 0.2 2.5 2 0 0 2 2 2 2 KH domain KH_4 PF13083.6 gi|452210580|ref|YP_007490694.1| - 0.068 13.0 5.6 2 8.3 0.2 3.4 2 1 1 3 3 3 0 KH domain Ribosomal_L6 PF00347.23 gi|452210580|ref|YP_007490694.1| - 0.093 13.4 1.0 3.7 8.3 0.1 2.3 2 0 0 2 2 2 0 Ribosomal protein L6 RIO1 PF01163.22 gi|452210581|ref|YP_007490695.1| - 1.2e-61 207.6 0.2 1.6e-61 207.2 0.2 1.1 1 0 0 1 1 1 1 RIO1 family Pkinase PF00069.25 gi|452210581|ref|YP_007490695.1| - 3.6e-07 29.8 0.1 6.4e-07 29.0 0.1 1.5 1 1 0 1 1 1 1 Protein kinase domain Kdo PF06293.14 gi|452210581|ref|YP_007490695.1| - 0.0029 17.0 0.0 0.91 8.8 0.0 2.3 2 0 0 2 2 2 2 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 gi|452210581|ref|YP_007490695.1| - 0.0038 16.1 0.0 0.0066 15.3 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 gi|452210581|ref|YP_007490695.1| - 0.0067 16.4 0.0 0.035 14.0 0.0 2.0 1 1 1 2 2 2 1 Phosphotransferase enzyme family Lectin_like PF18560.1 gi|452210581|ref|YP_007490695.1| - 0.067 13.4 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 Lectin like domain Choline_kinase PF01633.20 gi|452210581|ref|YP_007490695.1| - 0.15 11.6 0.5 0.32 10.6 0.1 1.7 2 0 0 2 2 2 0 Choline/ethanolamine kinase eIF-1a PF01176.19 gi|452210582|ref|YP_007490696.1| - 1.4e-18 66.4 0.2 1.9e-18 66.0 0.2 1.2 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 Med14 PF08638.11 gi|452210582|ref|YP_007490696.1| - 0.0031 16.9 0.0 0.0036 16.7 0.0 1.1 1 0 0 1 1 1 1 Mediator complex subunit MED14 DUF2652 PF10851.8 gi|452210584|ref|YP_007490698.1| - 0.033 14.3 0.0 0.065 13.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2652) GDE_C PF06202.14 gi|452210585|ref|YP_007490699.1| - 5.1e-130 433.8 0.0 9.3e-130 433.0 0.0 1.4 2 0 0 2 2 2 1 Amylo-alpha-1,6-glucosidase GDE_N PF12439.8 gi|452210585|ref|YP_007490699.1| - 2.1e-61 207.1 0.0 3.2e-61 206.5 0.0 1.3 1 0 0 1 1 1 1 Glycogen debranching enzyme N terminal DUF608 PF04685.13 gi|452210585|ref|YP_007490699.1| - 0.0071 15.6 0.1 0.014 14.6 0.1 1.4 1 0 0 1 1 1 1 Glycosyl-hydrolase family 116, catalytic region Glyco_hydro_100 PF12899.7 gi|452210585|ref|YP_007490699.1| - 0.02 13.6 0.1 2.2 6.9 0.0 2.7 2 1 0 2 2 2 0 Alkaline and neutral invertase Plasmo_rep PF12135.8 gi|452210585|ref|YP_007490699.1| - 0.11 12.1 2.8 0.23 11.1 0.2 2.4 2 0 0 2 2 2 0 Plasmodium repeat family PRA-CH PF01502.18 gi|452210586|ref|YP_007490700.1| - 7.7e-27 92.9 0.4 9.7e-27 92.6 0.4 1.1 1 0 0 1 1 1 1 Phosphoribosyl-AMP cyclohydrolase Sipho_Gp37 PF14594.6 gi|452210586|ref|YP_007490700.1| - 0.2 10.6 0.0 0.22 10.5 0.0 1.1 1 0 0 1 1 1 0 Siphovirus ReqiPepy6 Gp37-like protein T2SSE PF00437.20 gi|452210587|ref|YP_007490701.1| - 1.2e-11 44.2 0.2 2.2e-11 43.4 0.2 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein KH_1 PF00013.29 gi|452210587|ref|YP_007490701.1| - 0.00014 21.6 0.7 0.00043 20.1 0.7 1.9 1 0 0 1 1 1 1 KH domain PIN_4 PF13638.6 gi|452210587|ref|YP_007490701.1| - 0.00026 21.3 0.0 0.00063 20.0 0.0 1.7 1 0 0 1 1 1 1 PIN domain KH_2 PF07650.17 gi|452210587|ref|YP_007490701.1| - 0.0005 19.8 1.1 0.0018 18.0 1.1 2.0 1 0 0 1 1 1 1 KH domain PIN PF01850.21 gi|452210587|ref|YP_007490701.1| - 0.00066 20.2 0.1 0.0022 18.5 0.0 1.9 2 0 0 2 2 1 1 PIN domain TIP49 PF06068.13 gi|452210587|ref|YP_007490701.1| - 0.0009 18.5 1.2 0.0021 17.4 0.0 2.0 2 1 1 3 3 3 1 TIP49 P-loop domain AAA_22 PF13401.6 gi|452210587|ref|YP_007490701.1| - 0.00096 19.4 0.0 0.59 10.4 0.0 2.7 3 0 0 3 3 3 1 AAA domain AAA_16 PF13191.6 gi|452210587|ref|YP_007490701.1| - 0.0013 19.1 0.0 0.003 18.0 0.0 1.6 1 0 0 1 1 1 1 AAA ATPase domain Zeta_toxin PF06414.12 gi|452210587|ref|YP_007490701.1| - 0.0041 16.4 0.0 0.0087 15.4 0.0 1.5 1 0 0 1 1 1 1 Zeta toxin KH_4 PF13083.6 gi|452210587|ref|YP_007490701.1| - 0.0059 16.5 0.3 0.023 14.6 0.3 2.0 1 0 0 1 1 1 1 KH domain AAA_33 PF13671.6 gi|452210587|ref|YP_007490701.1| - 0.0095 16.1 0.0 0.023 14.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain ATPase PF06745.13 gi|452210587|ref|YP_007490701.1| - 0.012 14.9 0.0 0.069 12.5 0.0 2.2 2 1 1 3 3 3 0 KaiC AAA_18 PF13238.6 gi|452210587|ref|YP_007490701.1| - 0.014 16.0 0.0 0.03 14.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 gi|452210587|ref|YP_007490701.1| - 0.016 15.6 0.0 0.042 14.3 0.0 1.7 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_11 PF13086.6 gi|452210587|ref|YP_007490701.1| - 0.017 14.9 0.1 0.044 13.6 0.0 1.6 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.15 gi|452210587|ref|YP_007490701.1| - 0.017 15.0 0.0 0.048 13.6 0.0 1.7 1 0 0 1 1 1 0 NTPase APS_kinase PF01583.20 gi|452210587|ref|YP_007490701.1| - 0.018 14.9 0.0 0.29 11.0 0.0 2.4 2 0 0 2 2 2 0 Adenylylsulphate kinase AAA_29 PF13555.6 gi|452210587|ref|YP_007490701.1| - 0.034 13.9 0.0 0.084 12.6 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_5 PF07728.14 gi|452210587|ref|YP_007490701.1| - 0.039 13.9 0.0 0.11 12.4 0.0 1.8 2 0 0 2 2 1 0 AAA domain (dynein-related subfamily) AAA_30 PF13604.6 gi|452210587|ref|YP_007490701.1| - 0.046 13.4 0.0 0.11 12.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 gi|452210587|ref|YP_007490701.1| - 0.061 13.3 0.0 0.12 12.4 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_25 PF13481.6 gi|452210587|ref|YP_007490701.1| - 0.064 12.8 0.1 0.12 11.9 0.1 1.5 1 1 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|452210587|ref|YP_007490701.1| - 0.078 12.7 0.0 0.26 11.0 0.0 1.8 2 0 0 2 2 2 0 AAA domain RuvB_N PF05496.12 gi|452210587|ref|YP_007490701.1| - 0.086 12.6 0.1 0.31 10.8 0.0 1.9 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain AAA_19 PF13245.6 gi|452210587|ref|YP_007490701.1| - 0.096 13.0 0.0 3.7 7.9 0.0 2.3 2 0 0 2 2 2 0 AAA domain IstB_IS21 PF01695.17 gi|452210587|ref|YP_007490701.1| - 0.11 12.2 0.0 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein RNA_helicase PF00910.22 gi|452210587|ref|YP_007490701.1| - 0.12 12.8 0.0 0.23 11.9 0.0 1.5 1 0 0 1 1 1 0 RNA helicase ATP_bind_1 PF03029.17 gi|452210587|ref|YP_007490701.1| - 0.12 12.1 0.0 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein Thymidylate_kin PF02223.17 gi|452210587|ref|YP_007490701.1| - 0.15 11.7 0.0 0.35 10.5 0.0 1.6 1 1 0 1 1 1 0 Thymidylate kinase PPV_E1_C PF00519.17 gi|452210587|ref|YP_007490701.1| - 0.29 9.9 0.0 0.43 9.3 0.0 1.1 1 0 0 1 1 1 0 Papillomavirus helicase FlaC_arch PF05377.11 gi|452210588|ref|YP_007490702.1| - 0.021 15.2 3.0 0.5 10.8 0.0 3.0 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) DUF1664 PF07889.12 gi|452210588|ref|YP_007490702.1| - 0.022 14.8 1.0 0.45 10.6 0.1 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) Prefoldin_2 PF01920.20 gi|452210588|ref|YP_007490702.1| - 0.025 14.5 3.9 2.1 8.4 0.1 2.8 2 1 1 3 3 3 0 Prefoldin subunit APG17 PF04108.12 gi|452210588|ref|YP_007490702.1| - 0.038 13.1 1.3 5.4 6.0 0.3 2.1 2 0 0 2 2 2 0 Autophagy protein Apg17 Prefoldin_3 PF13758.6 gi|452210588|ref|YP_007490702.1| - 0.052 13.6 1.4 0.82 9.8 0.1 2.6 2 1 1 3 3 3 0 Prefoldin subunit Baculo_PEP_C PF04513.12 gi|452210588|ref|YP_007490702.1| - 0.064 13.3 0.1 0.26 11.3 0.0 1.8 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus TRAF_BIRC3_bd PF16673.5 gi|452210588|ref|YP_007490702.1| - 0.11 12.4 3.7 0.4 10.5 1.1 2.3 2 0 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain Helo_like_N PF17111.5 gi|452210588|ref|YP_007490702.1| - 0.13 11.6 0.6 0.43 9.9 0.3 1.8 2 0 0 2 2 2 0 Fungal N-terminal domain of STAND proteins CLZ PF16526.5 gi|452210588|ref|YP_007490702.1| - 0.13 12.6 3.0 2.9 8.3 0.4 3.2 2 1 1 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF4164 PF13747.6 gi|452210588|ref|YP_007490702.1| - 0.23 11.8 1.5 0.9 9.9 0.2 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4164) CCDC-167 PF15188.6 gi|452210588|ref|YP_007490702.1| - 0.27 11.6 1.8 0.74 10.2 0.0 2.4 2 1 0 2 2 2 0 Coiled-coil domain-containing protein 167 Lebercilin PF15619.6 gi|452210588|ref|YP_007490702.1| - 0.44 10.2 2.7 11 5.6 0.3 2.2 2 0 0 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease DUF5082 PF16888.5 gi|452210588|ref|YP_007490702.1| - 0.59 10.4 2.4 4.4 7.6 0.3 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF5082) MetOD2 PF18548.1 gi|452210588|ref|YP_007490702.1| - 1.5 9.0 4.2 2.7 8.1 0.2 2.5 2 1 0 2 2 2 0 Metanogen output domain 2 DUF241 PF03087.14 gi|452210588|ref|YP_007490702.1| - 3.9 7.2 6.6 18 5.1 0.1 2.5 2 1 0 2 2 2 0 Arabidopsis protein of unknown function TolA_bind_tri PF16331.5 gi|452210588|ref|YP_007490702.1| - 6 7.0 5.8 19 5.4 0.6 3.0 2 1 0 2 2 2 0 TolA binding protein trimerisation Big_1 PF02369.16 gi|452210589|ref|YP_007490703.1| - 0.00071 19.5 0.4 0.0013 18.7 0.4 1.4 1 0 0 1 1 1 1 Bacterial Ig-like domain (group 1) CarboxypepD_reg PF13620.6 gi|452210589|ref|YP_007490703.1| - 0.04 14.2 0.0 0.1 12.9 0.0 1.8 1 1 1 2 2 2 0 Carboxypeptidase regulatory-like domain DsbG_N PF18257.1 gi|452210589|ref|YP_007490703.1| - 0.079 13.1 0.0 0.21 11.8 0.0 1.6 1 1 1 2 2 2 0 Disulfide isomerase DsbG N-terminal CarboxypepD_reg PF13620.6 gi|452210590|ref|YP_007490704.1| - 2.8e-05 24.3 0.6 0.0002 21.5 0.6 2.3 1 1 0 1 1 1 1 Carboxypeptidase regulatory-like domain Big_1 PF02369.16 gi|452210590|ref|YP_007490704.1| - 0.00015 21.6 3.5 0.00015 21.6 3.5 1.7 1 1 0 1 1 1 1 Bacterial Ig-like domain (group 1) MG4 PF17789.1 gi|452210590|ref|YP_007490704.1| - 0.0053 16.9 0.1 0.0092 16.1 0.1 1.5 1 0 0 1 1 1 1 Macroglobulin domain MG4 CarbopepD_reg_2 PF13715.6 gi|452210590|ref|YP_007490704.1| - 0.07 13.1 0.1 0.19 11.7 0.1 1.7 1 0 0 1 1 1 0 CarboxypepD_reg-like domain GATase PF00117.28 gi|452210591|ref|YP_007490705.1| - 8.9e-22 77.8 0.0 1.1e-21 77.4 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|452210591|ref|YP_007490705.1| - 1.5e-07 31.4 0.0 2.2e-07 30.8 0.0 1.2 1 0 0 1 1 1 1 Peptidase C26 SNO PF01174.19 gi|452210591|ref|YP_007490705.1| - 5.1e-07 29.7 0.0 2.8e-06 27.3 0.0 1.8 1 1 0 1 1 1 1 SNO glutamine amidotransferase family GATase_3 PF07685.14 gi|452210591|ref|YP_007490705.1| - 1.9e-06 27.6 0.3 1.4e-05 24.8 0.0 1.9 2 0 0 2 2 2 1 CobB/CobQ-like glutamine amidotransferase domain DJ-1_PfpI PF01965.24 gi|452210591|ref|YP_007490705.1| - 0.0025 17.6 0.0 0.004 17.0 0.0 1.2 1 0 0 1 1 1 1 DJ-1/PfpI family GATase_5 PF13507.6 gi|452210591|ref|YP_007490705.1| - 0.028 13.5 0.0 0.44 9.6 0.0 2.1 2 0 0 2 2 2 0 CobB/CobQ-like glutamine amidotransferase domain AIRS_C PF02769.22 gi|452210592|ref|YP_007490706.1| - 6.7e-17 62.0 1.1 1.3e-16 61.2 1.1 1.5 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|452210592|ref|YP_007490706.1| - 1.7e-08 35.0 0.4 5.9e-08 33.3 0.4 2.0 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain NfeD PF01957.18 gi|452210593|ref|YP_007490707.1| - 6.7e-11 42.4 4.2 9.5e-11 41.9 2.3 2.3 2 0 0 2 2 2 1 NfeD-like C-terminal, partner-binding CLP_protease PF00574.23 gi|452210593|ref|YP_007490707.1| - 4.1e-06 26.8 0.2 7.2e-06 26.0 0.2 1.3 1 0 0 1 1 1 1 Clp protease SDH_sah PF01972.16 gi|452210593|ref|YP_007490707.1| - 0.035 13.1 0.4 0.061 12.3 0.4 1.4 1 0 0 1 1 1 0 Serine dehydrogenase proteinase FMN_dh PF01070.18 gi|452210593|ref|YP_007490707.1| - 0.13 11.3 0.0 0.16 11.0 0.0 1.2 1 0 0 1 1 1 0 FMN-dependent dehydrogenase COX14 PF14880.6 gi|452210593|ref|YP_007490707.1| - 0.54 10.1 0.0 0.54 10.1 0.0 1.9 2 0 0 2 2 2 0 Cytochrome oxidase c assembly Band_7 PF01145.25 gi|452210594|ref|YP_007490708.1| - 9.6e-39 133.2 2.8 1.3e-38 132.8 2.8 1.1 1 0 0 1 1 1 1 SPFH domain / Band 7 family Band_7_1 PF13421.6 gi|452210594|ref|YP_007490708.1| - 5.4e-05 23.0 0.1 9.4e-05 22.2 0.1 1.5 1 0 0 1 1 1 1 SPFH domain-Band 7 family Ground-like PF04155.18 gi|452210594|ref|YP_007490708.1| - 0.084 13.6 0.6 0.2 12.3 0.1 2.0 2 1 0 2 2 2 0 Ground-like domain DnaJ_CXXCXGXG PF00684.19 gi|452210595|ref|YP_007490709.1| - 3.7e-09 36.8 6.8 3.7e-09 36.8 6.8 2.6 1 1 1 2 2 2 2 DnaJ central domain tRNA_anti-codon PF01336.25 gi|452210595|ref|YP_007490709.1| - 4.1e-09 36.3 0.0 9.9e-09 35.1 0.0 1.7 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain DHH PF01368.20 gi|452210595|ref|YP_007490709.1| - 2.9e-06 27.5 0.2 8.7e-06 25.9 0.2 1.8 1 0 0 1 1 1 1 DHH family tRNA_anti_2 PF13742.6 gi|452210595|ref|YP_007490709.1| - 6.2e-05 23.1 0.0 0.00079 19.6 0.0 2.5 2 0 0 2 2 2 1 OB-fold nucleic acid binding domain S1 PF00575.23 gi|452210595|ref|YP_007490709.1| - 0.0015 18.9 0.4 0.0015 18.9 0.4 2.2 2 0 0 2 2 2 1 S1 RNA binding domain RMI2 PF16100.5 gi|452210595|ref|YP_007490709.1| - 0.0038 17.0 0.0 0.0074 16.1 0.0 1.4 1 0 0 1 1 1 1 RecQ-mediated genome instability protein 2 zf-CHY PF05495.12 gi|452210595|ref|YP_007490709.1| - 0.054 14.0 0.6 0.054 14.0 0.6 2.7 1 1 1 2 2 2 0 CHY zinc finger zf-C4pol PF14260.6 gi|452210595|ref|YP_007490709.1| - 2.8 8.5 12.3 11 6.6 1.7 2.5 2 0 0 2 2 2 0 C4-type zinc-finger of DNA polymerase delta C1_2 PF03107.16 gi|452210595|ref|YP_007490709.1| - 7.1 7.0 8.6 0.72 10.2 1.3 2.6 1 1 1 2 2 2 0 C1 domain Pribosyltran PF00156.27 gi|452210596|ref|YP_007490710.1| - 8.2e-22 77.4 0.6 1.4e-21 76.7 0.6 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.6 gi|452210596|ref|YP_007490710.1| - 1.1e-06 28.3 0.8 1.3e-05 24.8 0.2 2.0 1 1 1 2 2 2 1 Phosphoribosyl transferase UPRTase PF14681.6 gi|452210596|ref|YP_007490710.1| - 4e-05 23.2 1.7 0.0002 20.9 0.2 2.0 1 1 0 2 2 2 1 Uracil phosphoribosyltransferase HTH_7 PF02796.15 gi|452210596|ref|YP_007490710.1| - 0.00026 21.0 0.0 0.0006 19.8 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase Sigma70_r4_2 PF08281.12 gi|452210596|ref|YP_007490710.1| - 0.0017 18.0 0.0 0.036 13.7 0.0 2.2 2 0 0 2 2 2 1 Sigma-70, region 4 GerE PF00196.19 gi|452210596|ref|YP_007490710.1| - 0.0079 15.7 0.0 0.017 14.6 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_11 PF08279.12 gi|452210596|ref|YP_007490710.1| - 0.017 15.0 0.1 0.06 13.3 0.0 1.9 2 0 0 2 2 2 0 HTH domain HTH_23 PF13384.6 gi|452210596|ref|YP_007490710.1| - 0.019 14.8 0.0 0.036 13.9 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain Sigma70_r4 PF04545.16 gi|452210596|ref|YP_007490710.1| - 0.08 12.5 0.0 0.26 10.9 0.0 1.7 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_Crp_2 PF13545.6 gi|452210596|ref|YP_007490710.1| - 0.12 12.3 0.0 0.34 10.9 0.0 1.7 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain PIN_6 PF17146.4 gi|452210597|ref|YP_007490711.1| - 4.3e-13 49.6 0.0 7.8e-13 48.7 0.0 1.4 1 0 0 1 1 1 1 PIN domain of ribonuclease zinc-ribbons_6 PF07191.12 gi|452210597|ref|YP_007490711.1| - 0.0021 18.0 0.6 0.0042 17.0 0.6 1.5 1 0 0 1 1 1 1 zinc-ribbons PIN_4 PF13638.6 gi|452210597|ref|YP_007490711.1| - 0.0074 16.6 0.3 0.011 16.0 0.3 1.4 1 1 0 1 1 1 1 PIN domain PIN_5 PF08745.11 gi|452210597|ref|YP_007490711.1| - 0.015 14.7 0.5 0.055 12.9 0.3 1.6 1 1 1 2 2 2 0 PINc domain ribonuclease Prok-RING_1 PF14446.6 gi|452210597|ref|YP_007490711.1| - 0.022 14.7 2.3 0.045 13.7 2.3 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 Rad50_zn_hook PF04423.14 gi|452210597|ref|YP_007490711.1| - 0.024 14.5 0.6 0.024 14.5 0.6 2.3 2 0 0 2 2 2 0 Rad50 zinc hook motif DNA_ligase_ZBD PF03119.16 gi|452210597|ref|YP_007490711.1| - 0.058 13.4 0.2 0.12 12.4 0.2 1.5 1 0 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain zf-C3HC4_3 PF13920.6 gi|452210597|ref|YP_007490711.1| - 0.064 13.1 0.8 0.11 12.4 0.8 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Zn-ribbon_8 PF09723.10 gi|452210597|ref|YP_007490711.1| - 0.34 11.1 3.4 1 9.5 3.4 1.8 1 1 0 1 1 1 0 Zinc ribbon domain DUF169 PF02596.15 gi|452210598|ref|YP_007490712.1| - 5.8e-57 193.0 0.1 6.5e-57 192.8 0.1 1.0 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 Ribosomal_S8e PF01201.22 gi|452210600|ref|YP_007490714.1| - 1.7e-34 118.9 6.2 2e-34 118.7 6.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S8e AsnC_trans_reg PF01037.21 gi|452210601|ref|YP_007490715.1| - 1.5e-16 60.1 0.1 3.3e-16 59.0 0.1 1.6 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 gi|452210601|ref|YP_007490715.1| - 4.9e-11 42.0 0.0 1.5e-10 40.5 0.1 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|452210601|ref|YP_007490715.1| - 3e-10 39.8 0.1 7.8e-10 38.4 0.0 1.8 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|452210601|ref|YP_007490715.1| - 2.7e-06 27.3 0.1 9.7e-06 25.5 0.1 1.8 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_20 PF12840.7 gi|452210601|ref|YP_007490715.1| - 1.5e-05 24.9 0.0 2.7e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|452210601|ref|YP_007490715.1| - 2.6e-05 24.0 0.0 4.8e-05 23.1 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.12 gi|452210601|ref|YP_007490715.1| - 6.6e-05 22.8 0.1 0.00023 21.1 0.1 1.9 1 1 0 1 1 1 1 HTH domain TFIIE_alpha PF02002.17 gi|452210601|ref|YP_007490715.1| - 0.0006 19.6 0.2 0.001 18.9 0.2 1.4 1 0 0 1 1 1 1 TFIIE alpha subunit MarR PF01047.22 gi|452210601|ref|YP_007490715.1| - 0.00087 19.2 0.1 0.0016 18.3 0.1 1.5 1 0 0 1 1 1 1 MarR family DprA_WH PF17782.1 gi|452210601|ref|YP_007490715.1| - 0.0018 18.4 0.0 0.003 17.6 0.0 1.3 1 0 0 1 1 1 1 DprA winged helix domain DUF4423 PF14394.6 gi|452210601|ref|YP_007490715.1| - 0.0059 16.3 0.1 0.018 14.7 0.0 1.7 1 1 1 2 2 2 1 Domain of unknown function (DUF4423) Fe_dep_repress PF01325.19 gi|452210601|ref|YP_007490715.1| - 0.0092 16.2 0.1 0.024 14.8 0.1 1.7 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain DUF2250 PF10007.9 gi|452210601|ref|YP_007490715.1| - 0.016 15.3 0.1 0.029 14.5 0.1 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) Rrf2 PF02082.20 gi|452210601|ref|YP_007490715.1| - 0.036 14.4 0.3 0.15 12.4 0.1 2.1 3 0 0 3 3 2 0 Transcriptional regulator RepL PF05732.11 gi|452210601|ref|YP_007490715.1| - 0.05 13.0 0.0 0.1 12.0 0.0 1.5 1 0 0 1 1 1 0 Firmicute plasmid replication protein (RepL) HTH_36 PF13730.6 gi|452210601|ref|YP_007490715.1| - 0.056 13.4 0.0 0.1 12.6 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_5 PF01022.20 gi|452210601|ref|YP_007490715.1| - 0.061 13.2 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_IclR PF09339.10 gi|452210601|ref|YP_007490715.1| - 0.062 13.1 0.1 0.12 12.2 0.1 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain RPA_C PF08784.11 gi|452210601|ref|YP_007490715.1| - 0.067 13.9 0.1 0.15 12.7 0.1 1.6 1 0 0 1 1 1 0 Replication protein A C terminal FaeA PF04703.12 gi|452210601|ref|YP_007490715.1| - 0.084 13.3 0.1 0.14 12.5 0.1 1.4 1 0 0 1 1 1 0 FaeA-like protein DUF501 PF04417.12 gi|452210601|ref|YP_007490715.1| - 0.091 12.6 0.0 0.22 11.3 0.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF501) Rio2_N PF09202.11 gi|452210601|ref|YP_007490715.1| - 0.098 12.9 0.1 1.4 9.2 0.0 2.2 2 0 0 2 2 2 0 Rio2, N-terminal HTH_27 PF13463.6 gi|452210601|ref|YP_007490715.1| - 0.1 13.1 0.1 0.28 11.7 0.1 1.7 2 0 0 2 2 1 0 Winged helix DNA-binding domain Phage_rep_O PF04492.13 gi|452210601|ref|YP_007490715.1| - 0.13 12.9 0.1 0.67 10.6 0.0 2.0 2 1 0 2 2 2 0 Bacteriophage replication protein O Aminotran_1_2 PF00155.21 gi|452210602|ref|YP_007490716.1| - 3.7e-59 200.7 0.0 4.1e-59 200.6 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|452210602|ref|YP_007490716.1| - 3.2e-11 43.2 0.6 4.7e-11 42.6 0.6 1.1 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 gi|452210602|ref|YP_007490716.1| - 1.2e-06 27.8 0.0 1.7e-06 27.2 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|452210602|ref|YP_007490716.1| - 0.0027 16.3 0.1 0.0047 15.5 0.1 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme OKR_DC_1 PF01276.20 gi|452210602|ref|YP_007490716.1| - 0.011 14.4 0.0 0.016 14.0 0.0 1.2 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain Alliinase_C PF04864.13 gi|452210602|ref|YP_007490716.1| - 0.12 11.3 0.0 0.43 9.4 0.0 1.8 2 0 0 2 2 2 0 Allinase B12-binding PF02310.19 gi|452210603|ref|YP_007490717.1| - 9.1e-24 83.8 0.8 1.7e-23 83.0 0.5 1.6 2 0 0 2 2 2 1 B12 binding domain B12-binding_2 PF02607.17 gi|452210603|ref|YP_007490717.1| - 3e-20 72.4 2.5 3.4e-20 72.3 1.0 1.9 2 0 0 2 2 2 1 B12 binding domain Endonuc-BsobI PF09194.10 gi|452210603|ref|YP_007490717.1| - 0.52 9.5 2.7 4.7 6.3 0.0 2.8 3 0 0 3 3 3 0 Restriction endonuclease BsobI B12-binding PF02310.19 gi|452210604|ref|YP_007490718.1| - 2.6e-26 92.0 0.5 5.1e-26 91.1 0.5 1.5 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|452210604|ref|YP_007490718.1| - 8.9e-10 38.9 2.4 2e-08 34.5 2.4 2.6 1 1 0 1 1 1 1 B12 binding domain T2SSL PF05134.13 gi|452210606|ref|YP_007490720.1| - 0.15 11.4 0.2 0.15 11.4 0.2 1.1 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein L UPF0051 PF01458.17 gi|452210607|ref|YP_007490721.1| - 2.9e-37 128.5 0.4 3.7e-37 128.1 0.4 1.1 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) ABC_tran PF00005.27 gi|452210608|ref|YP_007490722.1| - 3.7e-25 89.0 0.1 5e-25 88.6 0.1 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|452210608|ref|YP_007490722.1| - 1.4e-11 44.3 0.2 2.2e-07 30.5 0.0 2.0 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|452210608|ref|YP_007490722.1| - 8e-11 42.3 0.2 7.8e-05 22.6 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_13 PF13166.6 gi|452210608|ref|YP_007490722.1| - 0.0067 15.1 0.0 0.22 10.1 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|452210608|ref|YP_007490722.1| - 0.0083 15.9 0.3 0.019 14.7 0.1 1.7 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|452210608|ref|YP_007490722.1| - 0.024 14.9 0.1 0.082 13.2 0.1 1.8 1 1 0 1 1 1 0 AAA domain AAA_27 PF13514.6 gi|452210608|ref|YP_007490722.1| - 0.03 13.9 0.0 0.051 13.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|452210608|ref|YP_007490722.1| - 0.04 14.4 1.0 0.073 13.6 1.0 1.8 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|452210608|ref|YP_007490722.1| - 0.079 13.1 0.1 0.089 13.0 0.1 1.4 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|452210608|ref|YP_007490722.1| - 0.096 12.9 0.0 0.18 12.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 gi|452210608|ref|YP_007490722.1| - 0.098 11.8 0.1 6.2 5.9 0.1 2.1 2 0 0 2 2 2 0 NB-ARC domain AAA_15 PF13175.6 gi|452210608|ref|YP_007490722.1| - 0.11 12.1 0.3 0.2 11.3 0.3 1.7 1 1 0 1 1 1 0 AAA ATPase domain AAA_24 PF13479.6 gi|452210608|ref|YP_007490722.1| - 0.17 11.6 0.0 1.4 8.6 0.0 2.0 2 0 0 2 2 2 0 AAA domain NTP_transf_3 PF12804.7 gi|452210609|ref|YP_007490723.1| - 3.3e-13 50.3 0.0 5.3e-13 49.6 0.0 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.19 gi|452210609|ref|YP_007490723.1| - 7.7e-07 29.3 0.0 4.8e-05 23.4 0.0 2.1 1 1 0 1 1 1 1 Cytidylyltransferase IspD PF01128.19 gi|452210609|ref|YP_007490723.1| - 7.6e-06 25.8 0.0 3.9e-05 23.5 0.0 2.0 1 1 1 2 2 2 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NTP_transferase PF00483.23 gi|452210609|ref|YP_007490723.1| - 0.0015 18.2 0.0 0.0022 17.6 0.0 1.3 1 0 0 1 1 1 1 Nucleotidyl transferase CofC PF01983.16 gi|452210609|ref|YP_007490723.1| - 0.036 13.2 0.1 0.047 12.9 0.1 1.3 1 1 0 1 1 1 0 Guanylyl transferase CofC like CobS PF02654.15 gi|452210610|ref|YP_007490724.1| - 9e-37 127.3 11.9 1.1e-36 127.0 11.9 1.0 1 0 0 1 1 1 1 Cobalamin-5-phosphate synthase CD225 PF04505.12 gi|452210610|ref|YP_007490724.1| - 0.055 13.6 0.9 0.055 13.6 0.9 2.4 3 0 0 3 3 3 0 Interferon-induced transmembrane protein PgpA PF04608.13 gi|452210611|ref|YP_007490725.1| - 2.6e-09 37.2 0.0 3.5e-09 36.8 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylglycerophosphatase A CobD_Cbib PF03186.13 gi|452210612|ref|YP_007490726.1| - 5.4e-91 304.6 0.1 7e-91 304.3 0.1 1.0 1 0 0 1 1 1 1 CobD/Cbib protein AmpE PF17113.5 gi|452210612|ref|YP_007490726.1| - 0.0094 15.3 0.0 0.016 14.6 0.0 1.3 1 0 0 1 1 1 1 Regulatory signalling modulator protein AmpE XFP PF03894.15 gi|452210612|ref|YP_007490726.1| - 0.13 12.0 0.0 0.19 11.4 0.0 1.2 1 0 0 1 1 1 0 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase Aminotran_1_2 PF00155.21 gi|452210613|ref|YP_007490727.1| - 3.6e-43 148.1 0.0 4.4e-43 147.9 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II zf-like PF04071.12 gi|452210613|ref|YP_007490727.1| - 1.8e-25 88.6 8.2 3.9e-25 87.6 8.2 1.5 1 0 0 1 1 1 1 Cysteine-rich small domain Aminotran_5 PF00266.19 gi|452210613|ref|YP_007490727.1| - 0.1 11.5 0.0 0.39 9.6 0.0 1.8 1 1 0 1 1 1 0 Aminotransferase class-V tRNA-synt_His PF13393.6 gi|452210614|ref|YP_007490728.1| - 1.8e-57 195.0 0.0 2.5e-57 194.5 0.0 1.2 1 0 0 1 1 1 1 Histidyl-tRNA synthetase tRNA-synt_2b PF00587.25 gi|452210614|ref|YP_007490728.1| - 5.1e-15 55.9 0.0 7.9e-15 55.3 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 gi|452210614|ref|YP_007490728.1| - 3e-13 49.7 0.1 5.1e-13 49.0 0.1 1.3 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2 PF00152.20 gi|452210614|ref|YP_007490728.1| - 4.7e-05 22.6 0.1 0.78 8.8 0.1 3.0 3 0 0 3 3 3 2 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.20 gi|452210614|ref|YP_007490728.1| - 0.025 14.1 0.0 0.12 11.8 0.0 1.9 2 0 0 2 2 2 0 tRNA synthetases class II core domain (F) Ribosomal_S13_N PF08069.12 gi|452210619|ref|YP_007490733.1| - 1.2e-25 89.3 0.3 3e-25 88.0 0.3 1.7 1 0 0 1 1 1 1 Ribosomal S13/S15 N-terminal domain Ribosomal_S15 PF00312.22 gi|452210619|ref|YP_007490733.1| - 2.9e-16 59.4 0.7 4e-16 59.0 0.7 1.2 1 0 0 1 1 1 1 Ribosomal protein S15 ABC_tran PF00005.27 gi|452210620|ref|YP_007490734.1| - 1.1e-29 103.7 0.0 1.5e-29 103.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|452210620|ref|YP_007490734.1| - 2.7e-11 43.9 0.9 9.3e-05 22.4 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|452210620|ref|YP_007490734.1| - 2.3e-05 24.9 0.0 3.6e-05 24.2 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 gi|452210620|ref|YP_007490734.1| - 4.9e-05 23.9 0.0 7.9e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|452210620|ref|YP_007490734.1| - 0.0001 21.9 0.0 0.00027 20.6 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 gi|452210620|ref|YP_007490734.1| - 0.0004 19.9 0.2 0.49 9.8 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain ABC_ATPase PF09818.9 gi|452210620|ref|YP_007490734.1| - 0.00075 18.4 0.4 0.53 9.0 0.1 3.2 2 2 0 2 2 2 1 Predicted ATPase of the ABC class RsgA_GTPase PF03193.16 gi|452210620|ref|YP_007490734.1| - 0.0013 18.6 0.0 0.0024 17.8 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_30 PF13604.6 gi|452210620|ref|YP_007490734.1| - 0.0018 18.0 0.0 0.0039 16.9 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|452210620|ref|YP_007490734.1| - 0.0028 17.9 0.6 0.024 14.9 0.6 2.2 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|452210620|ref|YP_007490734.1| - 0.0031 18.0 0.2 0.036 14.5 0.2 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_15 PF13175.6 gi|452210620|ref|YP_007490734.1| - 0.0076 16.0 0.1 0.015 15.1 0.0 1.5 2 0 0 2 2 2 1 AAA ATPase domain AAA_14 PF13173.6 gi|452210620|ref|YP_007490734.1| - 0.0082 16.2 0.1 0.087 12.9 0.0 2.2 2 0 0 2 2 2 1 AAA domain NB-ARC PF00931.22 gi|452210620|ref|YP_007490734.1| - 0.01 15.1 0.5 0.14 11.3 0.0 2.1 2 1 0 2 2 2 0 NB-ARC domain AAA_19 PF13245.6 gi|452210620|ref|YP_007490734.1| - 0.014 15.7 0.7 0.29 11.5 0.1 2.3 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 gi|452210620|ref|YP_007490734.1| - 0.014 15.1 0.0 0.022 14.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|452210620|ref|YP_007490734.1| - 0.021 14.7 0.2 0.057 13.3 0.0 1.7 2 0 0 2 2 2 0 NACHT domain SRP54 PF00448.22 gi|452210620|ref|YP_007490734.1| - 0.023 14.3 0.3 0.054 13.1 0.0 1.7 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_33 PF13671.6 gi|452210620|ref|YP_007490734.1| - 0.026 14.7 0.1 0.1 12.8 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 gi|452210620|ref|YP_007490734.1| - 0.029 14.9 0.1 0.069 13.7 0.1 1.6 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 gi|452210620|ref|YP_007490734.1| - 0.032 14.1 1.4 0.23 11.3 0.1 2.5 2 1 0 2 2 2 0 NTPase AAA_5 PF07728.14 gi|452210620|ref|YP_007490734.1| - 0.044 13.8 0.4 1.8 8.5 0.1 2.7 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_25 PF13481.6 gi|452210620|ref|YP_007490734.1| - 0.055 13.0 0.0 0.14 11.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_13 PF13166.6 gi|452210620|ref|YP_007490734.1| - 0.065 11.9 0.1 5.3 5.6 0.0 2.0 2 0 0 2 2 2 0 AAA domain IstB_IS21 PF01695.17 gi|452210620|ref|YP_007490734.1| - 0.068 12.9 0.0 0.16 11.7 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein ATPase_2 PF01637.18 gi|452210620|ref|YP_007490734.1| - 0.087 12.7 0.1 0.18 11.7 0.0 1.5 2 0 0 2 2 1 0 ATPase domain predominantly from Archaea TniB PF05621.11 gi|452210620|ref|YP_007490734.1| - 0.095 12.1 1.0 2.1 7.7 0.5 2.2 2 1 0 2 2 2 0 Bacterial TniB protein AAA_28 PF13521.6 gi|452210620|ref|YP_007490734.1| - 0.13 12.5 0.0 0.22 11.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 gi|452210620|ref|YP_007490734.1| - 0.14 11.4 0.0 0.24 10.7 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_27 PF13514.6 gi|452210620|ref|YP_007490734.1| - 0.16 11.6 0.0 0.23 11.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain Rad17 PF03215.15 gi|452210620|ref|YP_007490734.1| - 0.18 11.7 0.0 0.41 10.5 0.0 1.5 1 0 0 1 1 1 0 Rad17 P-loop domain FecCD PF01032.18 gi|452210621|ref|YP_007490735.1| - 1.1e-91 307.1 34.5 1.3e-91 306.8 34.5 1.0 1 0 0 1 1 1 1 FecCD transport family DUF3796 PF12676.7 gi|452210621|ref|YP_007490735.1| - 0.14 12.6 5.5 0.67 10.4 1.0 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF3796) Peripla_BP_2 PF01497.18 gi|452210622|ref|YP_007490736.1| - 3.8e-21 75.8 0.1 6e-21 75.1 0.1 1.3 1 0 0 1 1 1 1 Periplasmic binding protein Oxidored_nitro PF00148.19 gi|452210622|ref|YP_007490736.1| - 0.062 12.0 0.1 0.098 11.4 0.1 1.2 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase QRPTase_C PF01729.19 gi|452210623|ref|YP_007490737.1| - 6.2e-59 198.6 1.3 7.6e-59 198.3 1.3 1.1 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.16 gi|452210623|ref|YP_007490737.1| - 2.9e-23 81.7 0.0 6.8e-23 80.5 0.0 1.6 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain TMP-TENI PF02581.17 gi|452210623|ref|YP_007490737.1| - 0.0081 15.5 0.1 0.013 14.8 0.1 1.4 1 0 0 1 1 1 1 Thiamine monophosphate synthase Biotin_lipoyl_2 PF13533.6 gi|452210623|ref|YP_007490737.1| - 0.02 14.7 0.1 0.037 13.8 0.1 1.4 1 0 0 1 1 1 0 Biotin-lipoyl like KDGP_aldolase PF07071.11 gi|452210623|ref|YP_007490737.1| - 0.067 13.0 0.3 0.12 12.2 0.2 1.4 1 1 0 1 1 1 0 KDGP aldolase Ribul_P_3_epim PF00834.19 gi|452210623|ref|YP_007490737.1| - 0.072 12.5 0.1 0.14 11.5 0.1 1.6 1 1 0 1 1 1 0 Ribulose-phosphate 3 epimerase family BILBO1_N PF18281.1 gi|452210624|ref|YP_007490738.1| - 0.088 13.2 0.0 0.11 13.0 0.0 1.1 1 0 0 1 1 1 0 BILBO1 N-terminal domain Disaggr_repeat PF06848.11 gi|452210625|ref|YP_007490739.1| - 1.4e-243 800.2 36.7 6.8e-87 289.8 3.9 3.8 3 0 0 3 3 3 3 Disaggregatase related repeat TGFb_propeptide PF00688.18 gi|452210625|ref|YP_007490739.1| - 9.4e-06 25.5 0.0 15 5.2 0.0 5.8 5 1 0 6 6 6 2 TGF-beta propeptide SMYLE_N PF18615.1 gi|452210625|ref|YP_007490739.1| - 0.098 12.2 0.2 29 4.0 0.0 2.9 3 0 0 3 3 3 0 Short myomegalin-like EB1 binding proteins, N-terminal domain MORN_2 PF07661.13 gi|452210625|ref|YP_007490739.1| - 4.6 7.8 11.2 2e+02 2.7 0.1 5.9 5 0 0 5 5 5 0 MORN repeat variant DUF108 PF01958.18 gi|452210626|ref|YP_007490740.1| - 7.9e-38 128.7 0.3 1.2e-37 128.1 0.3 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF108 NAD_binding_3 PF03447.16 gi|452210626|ref|YP_007490740.1| - 7e-19 68.6 0.1 1.6e-18 67.4 0.0 1.7 2 0 0 2 2 2 1 Homoserine dehydrogenase, NAD binding domain Peptidase_M42 PF05343.14 gi|452210626|ref|YP_007490740.1| - 0.053 12.5 0.0 0.072 12.1 0.0 1.2 1 0 0 1 1 1 0 M42 glutamyl aminopeptidase Semialdhyde_dh PF01118.24 gi|452210626|ref|YP_007490740.1| - 0.093 13.2 0.1 0.18 12.3 0.0 1.6 2 0 0 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain NadA PF02445.16 gi|452210628|ref|YP_007490742.1| - 5.4e-117 390.2 3.4 6.1e-117 390.1 3.4 1.0 1 0 0 1 1 1 1 Quinolinate synthetase A protein UbiA PF01040.18 gi|452210630|ref|YP_007490744.1| - 3.2e-42 144.6 15.3 4.2e-42 144.2 15.3 1.2 1 0 0 1 1 1 1 UbiA prenyltransferase family AdoMet_Synthase PF01941.19 gi|452210631|ref|YP_007490745.1| - 4.3e-163 542.7 0.2 4.9e-163 542.5 0.2 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase (AdoMet synthetase) PIN_5 PF08745.11 gi|452210632|ref|YP_007490746.1| - 2.1e-92 308.2 0.1 2.4e-92 308.0 0.1 1.0 1 0 0 1 1 1 1 PINc domain ribonuclease zf-CHY PF05495.12 gi|452210634|ref|YP_007490748.1| - 0.0056 17.1 1.7 3.8 8.1 0.1 3.0 3 0 0 3 3 3 1 CHY zinc finger zf_C2H2_13 PF18508.1 gi|452210634|ref|YP_007490748.1| - 0.026 14.1 2.2 1.5 8.5 0.9 2.7 2 0 0 2 2 2 0 Zinc finger domain zinc_ribbon_2 PF13240.6 gi|452210634|ref|YP_007490748.1| - 0.058 13.1 4.7 3.4 7.5 0.3 3.1 3 0 0 3 3 3 0 zinc-ribbon domain zf-CCHC_2 PF13696.6 gi|452210634|ref|YP_007490748.1| - 0.064 13.1 8.3 1 9.2 0.1 3.2 3 0 0 3 3 3 0 Zinc knuckle DZR PF12773.7 gi|452210634|ref|YP_007490748.1| - 0.073 13.1 4.4 1.9 8.5 4.4 2.5 1 1 0 1 1 1 0 Double zinc ribbon A2L_zn_ribbon PF08792.10 gi|452210634|ref|YP_007490748.1| - 0.2 11.4 9.8 1.2 9.0 0.3 3.6 4 0 0 4 4 4 0 A2L zinc ribbon domain zf_UBZ PF18439.1 gi|452210634|ref|YP_007490748.1| - 0.28 10.8 0.2 0.28 10.8 0.2 2.9 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger zf-RING_5 PF14634.6 gi|452210634|ref|YP_007490748.1| - 0.62 10.1 8.7 6.6 6.8 1.4 3.3 3 0 0 3 3 3 0 zinc-RING finger domain zinc-ribbons_6 PF07191.12 gi|452210634|ref|YP_007490748.1| - 1.4 8.9 6.8 4 7.5 1.7 2.8 1 1 2 3 3 3 0 zinc-ribbons DS PF01916.17 gi|452210635|ref|YP_007490749.1| - 3.4e-101 338.3 0.0 3.8e-101 338.1 0.0 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase OMPdecase PF00215.24 gi|452210636|ref|YP_007490750.1| - 1.6e-42 145.6 0.5 2.1e-42 145.3 0.5 1.1 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family PcrB PF01884.17 gi|452210636|ref|YP_007490750.1| - 0.0005 19.6 1.1 0.23 10.9 0.1 2.7 2 1 1 3 3 3 2 PcrB family Ribul_P_3_epim PF00834.19 gi|452210636|ref|YP_007490750.1| - 0.013 14.9 0.1 0.058 12.8 0.1 1.7 1 1 1 2 2 2 0 Ribulose-phosphate 3 epimerase family NanE PF04131.14 gi|452210636|ref|YP_007490750.1| - 0.023 13.9 3.1 3.8 6.6 0.0 3.2 2 2 2 4 4 4 0 Putative N-acetylmannosamine-6-phosphate epimerase HMGL-like PF00682.19 gi|452210636|ref|YP_007490750.1| - 0.033 13.8 0.2 0.093 12.3 0.2 1.8 1 1 0 1 1 1 0 HMGL-like CdhD PF03599.16 gi|452210638|ref|YP_007490752.1| - 9.2e-159 528.3 0.3 1.1e-158 528.0 0.3 1.0 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase delta subunit FeS PF04060.13 gi|452210638|ref|YP_007490752.1| - 7.5e-14 51.1 2.4 1.9e-13 49.8 2.4 1.7 1 0 0 1 1 1 1 Putative Fe-S cluster Pterin_bind PF00809.22 gi|452210638|ref|YP_007490752.1| - 0.0048 16.6 0.0 0.11 12.1 0.0 2.2 1 1 0 1 1 1 1 Pterin binding enzyme MOFRL PF05161.13 gi|452210638|ref|YP_007490752.1| - 0.12 12.6 0.2 0.23 11.7 0.2 1.4 1 0 0 1 1 1 0 MOFRL family CdhD PF03599.16 gi|452210639|ref|YP_007490753.1| - 1.5e-92 310.3 2.1 6.1e-85 285.3 0.1 3.1 1 1 2 3 3 3 3 CO dehydrogenase/acetyl-CoA synthase delta subunit AAA_31 PF13614.6 gi|452210641|ref|YP_007490755.1| - 1.7e-07 31.3 0.0 3.7e-07 30.2 0.0 1.5 1 1 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|452210641|ref|YP_007490755.1| - 1.6e-06 28.2 0.0 3.4e-06 27.1 0.0 1.5 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fer4_NifH PF00142.18 gi|452210641|ref|YP_007490755.1| - 2.3e-05 24.0 0.3 3.4e-05 23.4 0.3 1.4 1 1 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ParA PF10609.9 gi|452210641|ref|YP_007490755.1| - 0.00043 19.8 0.1 0.00087 18.8 0.1 1.5 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase Toprim PF01751.22 gi|452210641|ref|YP_007490755.1| - 0.012 15.9 0.1 0.049 13.9 0.0 2.1 2 0 0 2 2 2 0 Toprim domain AAA_26 PF13500.6 gi|452210641|ref|YP_007490755.1| - 0.041 13.7 0.3 0.086 12.6 0.3 1.6 1 1 0 1 1 1 0 AAA domain PEPcase_2 PF14010.6 gi|452210641|ref|YP_007490755.1| - 0.06 11.9 0.4 0.096 11.2 0.4 1.2 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxylase HTH_19 PF12844.7 gi|452210641|ref|YP_007490755.1| - 0.14 12.2 1.0 0.45 10.6 0.2 2.2 3 0 0 3 3 3 0 Helix-turn-helix domain CbiA PF01656.23 gi|452210642|ref|YP_007490756.1| - 4.1e-10 39.8 0.0 9.4e-10 38.6 0.0 1.6 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|452210642|ref|YP_007490756.1| - 1e-06 28.4 0.2 5.7e-05 22.7 0.1 2.5 2 1 0 2 2 2 1 NUBPL iron-transfer P-loop NTPase DUF87 PF01935.17 gi|452210642|ref|YP_007490756.1| - 2.6e-05 24.4 0.2 4.8e-05 23.6 0.2 1.5 1 1 0 1 1 1 1 Helicase HerA, central domain AAA_31 PF13614.6 gi|452210642|ref|YP_007490756.1| - 4.7e-05 23.4 0.3 0.00036 20.5 0.0 2.2 2 0 0 2 2 2 1 AAA domain ArsA_ATPase PF02374.15 gi|452210642|ref|YP_007490756.1| - 5.2e-05 22.6 0.3 0.00012 21.4 0.2 1.6 2 0 0 2 2 2 1 Anion-transporting ATPase Zeta_toxin PF06414.12 gi|452210642|ref|YP_007490756.1| - 0.00016 21.0 0.1 0.00031 20.1 0.1 1.4 1 0 0 1 1 1 1 Zeta toxin Fer4_NifH PF00142.18 gi|452210642|ref|YP_007490756.1| - 0.0004 19.9 1.0 0.0011 18.5 0.1 2.0 2 1 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_24 PF13479.6 gi|452210642|ref|YP_007490756.1| - 0.00043 20.1 0.2 0.0036 17.0 0.1 2.1 2 0 0 2 2 2 1 AAA domain CBP_BcsQ PF06564.12 gi|452210642|ref|YP_007490756.1| - 0.0012 18.4 0.0 0.052 13.0 0.0 2.1 1 1 1 2 2 2 1 Cellulose biosynthesis protein BcsQ APS_kinase PF01583.20 gi|452210642|ref|YP_007490756.1| - 0.0013 18.7 0.1 0.0021 18.0 0.1 1.3 1 0 0 1 1 1 1 Adenylylsulphate kinase SRP54 PF00448.22 gi|452210642|ref|YP_007490756.1| - 0.0023 17.6 0.1 0.03 14.0 0.1 2.2 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain TrkA_N PF02254.18 gi|452210642|ref|YP_007490756.1| - 0.0044 17.3 0.1 0.7 10.2 0.0 2.5 2 1 0 2 2 2 1 TrkA-N domain AAA_18 PF13238.6 gi|452210642|ref|YP_007490756.1| - 0.0066 17.0 0.1 0.014 16.0 0.1 1.6 2 0 0 2 2 1 1 AAA domain ABC_tran PF00005.27 gi|452210642|ref|YP_007490756.1| - 0.0096 16.4 0.0 0.013 16.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter cobW PF02492.19 gi|452210642|ref|YP_007490756.1| - 0.015 14.9 0.2 3.3 7.3 0.0 2.4 2 1 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain MipZ PF09140.11 gi|452210642|ref|YP_007490756.1| - 0.018 14.4 0.1 0.12 11.7 0.0 1.9 2 0 0 2 2 2 0 ATPase MipZ CLP1_P PF16575.5 gi|452210642|ref|YP_007490756.1| - 0.023 14.5 0.0 0.054 13.3 0.0 1.7 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop KTI12 PF08433.10 gi|452210642|ref|YP_007490756.1| - 0.044 13.2 0.2 0.14 11.6 0.0 1.8 2 0 0 2 2 2 0 Chromatin associated protein KTI12 AAA_33 PF13671.6 gi|452210642|ref|YP_007490756.1| - 0.056 13.6 0.0 0.09 12.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|452210642|ref|YP_007490756.1| - 0.056 13.8 0.0 0.15 12.4 0.1 1.7 2 0 0 2 2 1 0 RNA helicase MMR_HSR1 PF01926.23 gi|452210642|ref|YP_007490756.1| - 0.066 13.3 0.2 2.8 8.1 0.1 2.4 2 1 0 2 2 2 0 50S ribosome-binding GTPase AAA_25 PF13481.6 gi|452210642|ref|YP_007490756.1| - 0.075 12.6 0.1 0.32 10.6 0.0 1.9 2 0 0 2 2 2 0 AAA domain PRK PF00485.18 gi|452210642|ref|YP_007490756.1| - 0.091 12.5 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_26 PF13500.6 gi|452210642|ref|YP_007490756.1| - 0.12 12.2 1.4 10 5.9 0.0 2.4 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 gi|452210642|ref|YP_007490756.1| - 0.2 12.0 0.0 0.32 11.4 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain TPP_enzyme_C PF02775.21 gi|452210643|ref|YP_007490757.1| - 4.4e-28 98.0 0.3 7.2e-28 97.3 0.3 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.19 gi|452210643|ref|YP_007490757.1| - 2.8e-12 46.9 0.1 1.4e-11 44.6 0.1 1.9 1 1 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Fer4 PF00037.27 gi|452210643|ref|YP_007490757.1| - 2.1e-08 33.6 14.7 3.1e-05 23.6 2.4 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain TPP_enzyme_N PF02776.18 gi|452210643|ref|YP_007490757.1| - 3.1e-06 26.9 0.0 1.5e-05 24.7 0.0 2.0 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Fer4_21 PF14697.6 gi|452210643|ref|YP_007490757.1| - 0.00036 20.6 13.0 0.00036 20.6 13.0 1.8 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452210643|ref|YP_007490757.1| - 0.0013 18.7 18.3 0.0028 17.6 2.8 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|452210643|ref|YP_007490757.1| - 0.0014 18.6 14.8 0.0035 17.4 14.8 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Transket_pyr PF02779.24 gi|452210643|ref|YP_007490757.1| - 0.013 15.1 0.0 0.18 11.4 0.0 2.2 2 0 0 2 2 2 0 Transketolase, pyrimidine binding domain Fer4_9 PF13187.6 gi|452210643|ref|YP_007490757.1| - 0.014 15.6 16.4 0.014 15.5 14.9 1.9 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|452210643|ref|YP_007490757.1| - 0.035 14.7 15.3 0.24 12.0 14.7 2.5 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|452210643|ref|YP_007490757.1| - 0.049 13.7 21.8 0.22 11.7 4.7 3.5 2 1 1 3 3 3 0 4Fe-4S binding domain Fer4_4 PF12800.7 gi|452210643|ref|YP_007490757.1| - 2 9.1 22.0 0.24 12.0 3.3 2.9 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_15 PF13459.6 gi|452210643|ref|YP_007490757.1| - 3.3 8.5 14.0 1.7 9.5 2.8 3.0 1 1 1 2 2 2 0 4Fe-4S single cluster domain POR PF01558.18 gi|452210644|ref|YP_007490758.1| - 7.2e-41 140.2 0.6 8.4e-41 140.0 0.6 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase Response_reg PF00072.24 gi|452210644|ref|YP_007490758.1| - 0.082 13.1 0.0 0.17 12.1 0.0 1.6 1 1 0 1 1 1 0 Response regulator receiver domain Lipoprotein_9 PF03180.14 gi|452210644|ref|YP_007490758.1| - 0.12 11.5 0.1 3.1 6.9 0.0 2.4 2 1 1 3 3 3 0 NLPA lipoprotein Glycos_transf_4 PF00953.21 gi|452210645|ref|YP_007490759.1| - 9.4e-26 90.7 15.5 9.4e-26 90.7 15.5 2.2 2 1 0 2 2 2 1 Glycosyl transferase family 4 RELT PF12606.8 gi|452210645|ref|YP_007490759.1| - 3.9 6.6 8.9 0.91 8.6 1.6 2.6 2 0 0 2 2 2 0 Tumour necrosis factor receptor superfamily member 19 Cohesin PF00963.18 gi|452210646|ref|YP_007490760.1| - 1.8e-19 70.4 4.0 2.3e-19 70.0 4.0 1.1 1 0 0 1 1 1 1 Cohesin domain Chordopox_A33R PF05966.12 gi|452210646|ref|YP_007490760.1| - 0.1 11.9 0.1 0.12 11.6 0.1 1.2 1 0 0 1 1 1 0 Chordopoxvirus A33R protein Glyco_hydro_49N PF17433.2 gi|452210646|ref|YP_007490760.1| - 0.11 12.2 0.2 0.22 11.1 0.0 1.6 2 0 0 2 2 2 0 Glycosyl hydrolase family 49 N-terminal Ig-like domain Dockerin_1 PF00404.18 gi|452210647|ref|YP_007490761.1| - 2.6e-11 43.6 0.3 1e-10 41.7 0.1 2.2 2 0 0 2 2 2 1 Dockerin type I domain Big_9 PF17963.1 gi|452210647|ref|YP_007490761.1| - 1.4e-08 35.4 9.7 1.3e-05 25.9 0.3 4.1 3 1 0 3 3 3 2 Bacterial Ig domain He_PIG PF05345.12 gi|452210647|ref|YP_007490761.1| - 3.2e-08 33.6 11.1 1e-07 32.0 0.1 4.9 5 0 0 5 5 5 1 Putative Ig domain Cohesin PF00963.18 gi|452210647|ref|YP_007490761.1| - 1.6e-06 28.5 4.7 1.6e-06 28.5 4.7 3.2 3 1 2 5 5 5 1 Cohesin domain Big_7 PF17957.1 gi|452210647|ref|YP_007490761.1| - 2.8e-05 24.8 13.4 8.3e-05 23.3 0.1 4.8 4 1 0 4 4 4 2 Bacterial Ig domain Cadherin_5 PF17892.1 gi|452210647|ref|YP_007490761.1| - 0.00015 21.7 0.3 0.0022 17.9 0.0 2.7 2 0 0 2 2 2 1 Cadherin-like domain PKD PF00801.20 gi|452210647|ref|YP_007490761.1| - 0.038 13.8 2.5 24 4.9 0.1 4.6 4 1 1 5 5 5 0 PKD domain Cadherin_4 PF17803.1 gi|452210647|ref|YP_007490761.1| - 0.11 13.2 6.5 1 10.0 0.1 4.1 3 1 1 4 4 4 0 Bacterial cadherin-like domain EF-hand_1 PF00036.32 gi|452210647|ref|YP_007490761.1| - 0.79 9.4 3.3 6.8 6.5 0.1 3.0 3 0 0 3 3 3 0 EF hand DUF354 PF04007.12 gi|452210649|ref|YP_007490763.1| - 2.2e-18 66.4 0.0 2.7e-18 66.1 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF354) Glyco_trans_4_2 PF13477.6 gi|452210649|ref|YP_007490763.1| - 0.002 18.2 0.0 0.0041 17.1 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glyco_transf_4 PF13439.6 gi|452210649|ref|YP_007490763.1| - 0.037 14.0 0.0 0.049 13.6 0.0 1.3 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Hexapep PF00132.24 gi|452210650|ref|YP_007490764.1| - 2.2e-05 24.0 0.4 3.9e-05 23.2 0.4 1.4 1 0 0 1 1 1 1 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|452210650|ref|YP_007490764.1| - 0.00013 21.6 0.3 0.00019 21.1 0.3 1.3 1 0 0 1 1 1 1 Hexapeptide repeat of succinyl-transferase FemAB PF02388.16 gi|452210651|ref|YP_007490765.1| - 1.4e-12 47.2 1.0 4.6e-06 25.8 0.0 3.1 1 1 1 3 3 3 3 FemAB family Acetyltransf_6 PF13480.7 gi|452210651|ref|YP_007490765.1| - 1.8e-09 37.9 0.0 2.9e-09 37.2 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Frataxin_Cyay PF01491.16 gi|452210651|ref|YP_007490765.1| - 0.083 13.0 0.0 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 Frataxin-like domain GatB_N PF02934.15 gi|452210652|ref|YP_007490766.1| - 0.019 14.4 0.2 0.92 8.8 0.1 2.1 2 0 0 2 2 2 0 GatB/GatE catalytic domain Cast PF10174.9 gi|452210652|ref|YP_007490766.1| - 0.024 12.9 0.1 0.03 12.6 0.1 1.1 1 0 0 1 1 1 0 RIM-binding protein of the cytomatrix active zone Prefoldin PF02996.17 gi|452210652|ref|YP_007490766.1| - 0.076 12.9 0.2 0.18 11.7 0.2 1.5 1 0 0 1 1 1 0 Prefoldin subunit Exosortase_EpsH PF09721.10 gi|452210653|ref|YP_007490767.1| - 3.8e-20 72.5 21.4 5.5e-20 72.0 21.4 1.1 1 0 0 1 1 1 1 Transmembrane exosortase (Exosortase_EpsH) Orai-1 PF07856.12 gi|452210653|ref|YP_007490767.1| - 0.067 12.9 0.4 0.067 12.9 0.4 2.4 3 1 0 3 3 3 0 Mediator of CRAC channel activity Peptidase_M48 PF01435.18 gi|452210654|ref|YP_007490768.1| - 3.5e-19 69.4 0.0 2.4e-18 66.6 0.0 2.3 2 1 0 2 2 2 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|452210654|ref|YP_007490768.1| - 3.7e-06 26.4 0.6 1.4e-05 24.4 0.0 2.0 2 1 0 2 2 2 1 BlaR1 peptidase M56 Phage_holin_3_6 PF07332.11 gi|452210654|ref|YP_007490768.1| - 0.96 9.5 4.0 2.6 8.1 1.7 2.3 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III DUF1616 PF07760.11 gi|452210655|ref|YP_007490769.1| - 1.3e-73 248.0 0.0 1.8e-73 247.5 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1616) ThrE PF06738.12 gi|452210655|ref|YP_007490769.1| - 0.0036 16.7 2.0 0.0063 15.9 2.0 1.4 1 0 0 1 1 1 1 Putative threonine/serine exporter Bax1-I PF01027.20 gi|452210655|ref|YP_007490769.1| - 7.4 6.3 10.8 1 9.2 4.7 2.2 3 0 0 3 3 3 0 Inhibitor of apoptosis-promoting Bax1 MBG PF17883.1 gi|452210657|ref|YP_007490771.1| - 0.043 14.4 0.1 0.043 14.4 0.1 2.2 2 1 0 2 2 2 0 MBG domain LptF_LptG PF03739.14 gi|452210657|ref|YP_007490771.1| - 0.066 12.0 0.4 0.12 11.3 0.3 1.4 1 1 1 2 2 2 0 Lipopolysaccharide export system permease LptF/LptG Big_2 PF02368.18 gi|452210657|ref|YP_007490771.1| - 9.4 6.2 14.6 4.7 7.2 5.8 2.3 1 1 1 2 2 2 0 Bacterial Ig-like domain (group 2) DUF2256 PF10013.9 gi|452210659|ref|YP_007490773.1| - 0.0069 16.5 0.3 0.013 15.6 0.3 1.5 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2256) DNA_ligase_ZBD PF03119.16 gi|452210659|ref|YP_007490773.1| - 0.019 15.0 0.2 0.049 13.7 0.1 1.7 1 1 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain Zn-C2H2_12 PF18112.1 gi|452210659|ref|YP_007490773.1| - 0.054 14.0 0.4 0.11 13.0 0.4 1.5 1 0 0 1 1 1 0 Autophagy receptor zinc finger-C2H2 domain zinc_ribbon_2 PF13240.6 gi|452210659|ref|YP_007490773.1| - 0.081 12.7 1.3 4.5 7.1 0.3 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-HIT PF04438.16 gi|452210659|ref|YP_007490773.1| - 0.43 10.5 5.2 11 6.0 5.2 2.1 1 1 0 1 1 1 0 HIT zinc finger PASTA PF03793.19 gi|452210661|ref|YP_007490775.1| - 1.1e-45 153.3 9.2 1.9e-13 50.1 0.2 4.7 4 0 0 4 4 4 4 PASTA domain APG6_N PF17675.1 gi|452210661|ref|YP_007490775.1| - 0.019 15.5 2.5 0.042 14.4 2.5 1.5 1 0 0 1 1 1 0 Apg6 coiled-coil region DUF5082 PF16888.5 gi|452210661|ref|YP_007490775.1| - 0.035 14.4 1.2 0.061 13.6 0.2 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF5082) potato_inhibit PF00280.18 gi|452210661|ref|YP_007490775.1| - 0.038 14.6 0.2 54 4.6 0.0 4.4 4 0 0 4 4 4 0 Potato inhibitor I family CENP-H PF05837.12 gi|452210661|ref|YP_007490775.1| - 0.055 13.9 1.8 0.12 12.8 1.8 1.6 1 0 0 1 1 1 0 Centromere protein H (CENP-H) Vps54_N PF10475.9 gi|452210661|ref|YP_007490775.1| - 0.11 11.8 0.3 0.18 11.1 0.3 1.3 1 0 0 1 1 1 0 Vacuolar-sorting protein 54, of GARP complex DivIC PF04977.15 gi|452210661|ref|YP_007490775.1| - 0.28 11.0 1.5 0.6 9.9 1.5 1.6 1 0 0 1 1 1 0 Septum formation initiator Ribosomal_L3 PF00297.22 gi|452210662|ref|YP_007490776.1| - 6.8e-64 216.2 0.2 2.9e-63 214.1 0.2 1.7 1 1 0 1 1 1 1 Ribosomal protein L3 Ribosomal_L4 PF00573.22 gi|452210663|ref|YP_007490777.1| - 2e-50 171.2 0.2 2.3e-50 171.0 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Ribosomal_L23 PF00276.20 gi|452210664|ref|YP_007490778.1| - 2.8e-14 53.2 1.0 3.3e-14 53.0 1.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L23 Ribosomal_S19 PF00203.21 gi|452210665|ref|YP_007490779.1| - 2.1e-26 91.6 0.3 3.3e-26 91.0 0.3 1.3 1 0 0 1 1 1 1 Ribosomal protein S19 Ribosomal_L2_C PF03947.18 gi|452210665|ref|YP_007490779.1| - 1.9e-18 66.9 0.0 4.6e-18 65.6 0.0 1.7 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 gi|452210665|ref|YP_007490779.1| - 7.7e-17 61.0 0.0 2.7e-16 59.3 0.0 1.9 2 0 0 2 2 2 1 Ribosomal Proteins L2, RNA binding domain RE_EcoO109I PF14511.6 gi|452210665|ref|YP_007490779.1| - 0.041 13.5 0.0 0.055 13.0 0.0 1.1 1 0 0 1 1 1 0 Type II restriction endonuclease EcoO109I Ribosomal_L22 PF00237.19 gi|452210666|ref|YP_007490780.1| - 1.9e-32 111.5 0.1 2.3e-32 111.3 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e Ribosomal_S3_C PF00189.20 gi|452210667|ref|YP_007490781.1| - 1.5e-22 79.9 0.7 3e-22 78.9 0.3 1.8 2 0 0 2 2 2 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.17 gi|452210667|ref|YP_007490781.1| - 5.7e-15 54.9 0.0 1.7e-14 53.4 0.0 1.9 1 0 0 1 1 1 1 KH domain Mitofilin PF09731.9 gi|452210667|ref|YP_007490781.1| - 0.027 13.3 6.6 0.039 12.8 6.6 1.2 1 0 0 1 1 1 0 Mitochondrial inner membrane protein KH_1 PF00013.29 gi|452210667|ref|YP_007490781.1| - 0.086 12.7 3.4 0.14 12.0 0.1 2.9 4 0 0 4 4 4 0 KH domain Ribosomal_L29 PF00831.23 gi|452210668|ref|YP_007490782.1| - 8.8e-19 67.2 0.2 1.1e-18 67.0 0.2 1.1 1 0 0 1 1 1 1 Ribosomal L29 protein Med9 PF07544.13 gi|452210668|ref|YP_007490782.1| - 0.026 14.6 0.3 0.38 10.9 0.2 2.0 2 0 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 MerR-DNA-bind PF09278.11 gi|452210668|ref|YP_007490782.1| - 0.058 13.9 2.0 4.3 7.9 0.0 2.2 2 0 0 2 2 2 0 MerR, DNA binding DUF3213 PF11491.8 gi|452210668|ref|YP_007490782.1| - 0.1 12.8 0.4 0.16 12.1 0.1 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3213) UPF0086 PF01868.16 gi|452210669|ref|YP_007490783.1| - 2.1e-23 82.0 0.0 2.4e-23 81.8 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function UPF0086 Ribosomal_S17 PF00366.20 gi|452210670|ref|YP_007490784.1| - 2.6e-28 97.9 6.1 3.1e-28 97.7 6.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S17 Ribosomal_S17_N PF16205.5 gi|452210670|ref|YP_007490784.1| - 0.0039 17.5 0.1 0.012 16.0 0.0 1.8 2 0 0 2 2 2 1 Ribosomal_S17 N-terminal Ribosomal_L14 PF00238.19 gi|452210671|ref|YP_007490785.1| - 5.9e-36 123.2 1.2 6.5e-36 123.1 1.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e Ribosomal_L26 PF16906.5 gi|452210672|ref|YP_007490786.1| - 2.3e-28 98.5 0.1 2.7e-28 98.2 0.1 1.1 1 0 0 1 1 1 1 Ribosomal proteins L26 eukaryotic, L24P archaeal KOW PF00467.29 gi|452210672|ref|YP_007490786.1| - 1.5e-05 24.8 0.2 3e-05 23.8 0.2 1.6 1 0 0 1 1 1 1 KOW motif DUF4150 PF13665.6 gi|452210672|ref|YP_007490786.1| - 0.066 13.4 0.1 0.085 13.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4150) Ribosomal_S4e PF00900.20 gi|452210673|ref|YP_007490787.1| - 7.9e-22 77.0 0.5 1.4e-21 76.1 0.5 1.4 1 0 0 1 1 1 1 Ribosomal family S4e RS4NT PF08071.12 gi|452210673|ref|YP_007490787.1| - 3e-09 36.8 2.1 3e-09 36.8 2.1 1.5 2 0 0 2 2 2 1 RS4NT (NUC023) domain S4 PF01479.25 gi|452210673|ref|YP_007490787.1| - 3e-05 23.6 1.5 5.7e-05 22.7 0.1 2.2 3 0 0 3 3 3 1 S4 domain KOW PF00467.29 gi|452210673|ref|YP_007490787.1| - 0.00024 20.9 0.9 0.0005 19.9 0.1 2.0 2 0 0 2 2 2 1 KOW motif LYTB PF02401.18 gi|452210673|ref|YP_007490787.1| - 0.035 13.4 0.1 0.06 12.6 0.1 1.3 1 0 0 1 1 1 0 LytB protein Ribosomal_L5_C PF00673.21 gi|452210674|ref|YP_007490788.1| - 1.3e-24 86.2 0.0 1.8e-24 85.7 0.0 1.3 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 gi|452210674|ref|YP_007490788.1| - 3.9e-15 55.9 0.1 6.9e-15 55.1 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L5 Ribosomal_S14 PF00253.21 gi|452210675|ref|YP_007490789.1| - 2.8e-15 55.8 2.1 3.2e-15 55.6 2.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e zf-P11 PF03854.14 gi|452210675|ref|YP_007490789.1| - 0.00038 20.0 1.6 0.00047 19.7 1.6 1.1 1 0 0 1 1 1 1 P-11 zinc finger DUF4428 PF14471.6 gi|452210675|ref|YP_007490789.1| - 0.00082 19.3 0.2 0.00093 19.1 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4428) zf-UBR PF02207.20 gi|452210675|ref|YP_007490789.1| - 0.0083 16.3 0.4 0.0091 16.1 0.4 1.1 1 0 0 1 1 1 1 Putative zinc finger in N-recognin (UBR box) DUF1451 PF07295.11 gi|452210675|ref|YP_007490789.1| - 0.021 14.9 0.3 0.023 14.7 0.3 1.1 1 0 0 1 1 1 0 Zinc-ribbon containing domain Rsm1 PF08600.10 gi|452210675|ref|YP_007490789.1| - 1.3 9.3 3.9 12 6.1 0.2 2.0 1 1 1 2 2 2 0 Rsm1-like Ribosomal_S8 PF00410.19 gi|452210676|ref|YP_007490790.1| - 5e-27 94.4 0.0 6e-27 94.1 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S8 Ribosomal_L6 PF00347.23 gi|452210677|ref|YP_007490791.1| - 9.2e-31 106.3 7.6 6.8e-17 61.9 0.2 2.0 2 0 0 2 2 2 2 Ribosomal protein L6 HSP20 PF00011.21 gi|452210677|ref|YP_007490791.1| - 0.02 15.1 0.5 11 6.3 0.1 2.8 4 0 0 4 4 4 0 Hsp20/alpha crystallin family Ribosomal_L32e PF01655.18 gi|452210678|ref|YP_007490792.1| - 3.9e-34 117.3 0.0 4.8e-34 117.0 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L32 Ribosomal_L19e PF01280.20 gi|452210679|ref|YP_007490793.1| - 5e-58 195.2 7.2 5.6e-58 195.1 7.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L19e Lant_dehydr_C PF14028.6 gi|452210679|ref|YP_007490793.1| - 0.041 13.4 0.1 0.045 13.3 0.1 1.1 1 0 0 1 1 1 0 Lantibiotic biosynthesis dehydratase C-term DUF1943 PF09172.11 gi|452210679|ref|YP_007490793.1| - 0.049 12.9 0.0 0.049 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) Ribosomal_L5e PF17144.4 gi|452210680|ref|YP_007490794.1| - 1.6e-27 96.5 0.2 7.5e-18 65.1 0.1 2.3 1 1 1 2 2 2 2 Ribosomal large subunit proteins 60S L5, and 50S L18 Ribosomal_L18p PF00861.22 gi|452210680|ref|YP_007490794.1| - 0.00015 22.1 0.0 0.0002 21.7 0.0 1.2 1 0 0 1 1 1 1 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Ribosomal_S11 PF00411.19 gi|452210680|ref|YP_007490794.1| - 0.057 13.8 0.0 0.094 13.1 0.0 1.4 1 1 0 1 1 1 0 Ribosomal protein S11 Ribosomal_S5 PF00333.20 gi|452210681|ref|YP_007490795.1| - 3.3e-25 87.9 0.4 8.2e-25 86.6 0.4 1.7 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.15 gi|452210681|ref|YP_007490795.1| - 1.5e-22 78.9 0.4 2.6e-22 78.1 0.4 1.4 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain Ribosomal_L30 PF00327.20 gi|452210682|ref|YP_007490796.1| - 5.6e-09 35.8 0.3 1.1e-08 34.8 0.3 1.5 1 0 0 1 1 1 1 Ribosomal protein L30p/L7e FeS PF04060.13 gi|452210682|ref|YP_007490796.1| - 0.044 13.4 0.2 0.095 12.4 0.2 1.5 1 0 0 1 1 1 0 Putative Fe-S cluster Ribosomal_L27A PF00828.19 gi|452210683|ref|YP_007490797.1| - 2e-16 60.8 0.3 2.6e-16 60.5 0.3 1.1 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SecY PF00344.20 gi|452210684|ref|YP_007490798.1| - 6.2e-67 226.0 23.6 7.3e-67 225.8 23.6 1.1 1 0 0 1 1 1 1 SecY translocase Plug_translocon PF10559.9 gi|452210684|ref|YP_007490798.1| - 1.2e-10 41.0 0.9 1.2e-10 41.0 0.9 2.5 2 1 1 3 3 3 1 Plug domain of Sec61p ADK PF00406.22 gi|452210685|ref|YP_007490799.1| - 3.7e-61 205.7 0.0 4.4e-61 205.4 0.0 1.0 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 gi|452210685|ref|YP_007490799.1| - 7.7e-29 100.9 0.0 1.2e-28 100.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain ADK_lid PF05191.14 gi|452210685|ref|YP_007490799.1| - 1.2e-14 53.9 2.1 1.9e-14 53.3 2.1 1.3 1 0 0 1 1 1 1 Adenylate kinase, active site lid Hydin_ADK PF17213.3 gi|452210685|ref|YP_007490799.1| - 4.4e-07 30.4 0.8 0.0048 17.2 0.1 3.0 2 1 0 3 3 3 2 Hydin Adenylate kinase-like domain AAA_18 PF13238.6 gi|452210685|ref|YP_007490799.1| - 2.7e-05 24.7 0.0 0.00014 22.4 0.0 2.1 2 1 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|452210685|ref|YP_007490799.1| - 0.0016 18.6 0.0 0.006 16.8 0.0 1.8 2 0 0 2 2 2 1 AAA domain Thymidylate_kin PF02223.17 gi|452210685|ref|YP_007490799.1| - 0.068 12.9 0.1 18 5.0 0.0 2.7 3 0 0 3 3 3 0 Thymidylate kinase AAA_22 PF13401.6 gi|452210685|ref|YP_007490799.1| - 0.12 12.7 0.0 0.19 12.0 0.0 1.6 1 1 0 1 1 1 0 AAA domain Cytidylate_kin PF02224.18 gi|452210685|ref|YP_007490799.1| - 0.12 12.1 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 Cytidylate kinase AAA PF00004.29 gi|452210685|ref|YP_007490799.1| - 0.12 12.8 0.0 0.3 11.5 0.0 1.7 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 gi|452210685|ref|YP_007490799.1| - 0.13 11.7 0.0 0.19 11.1 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 gi|452210685|ref|YP_007490799.1| - 0.18 11.5 0.1 0.43 10.3 0.1 1.6 1 1 0 1 1 1 0 AAA domain AIRC PF00731.20 gi|452210686|ref|YP_007490800.1| - 3.2e-57 192.3 1.7 3.8e-57 192.0 1.7 1.1 1 0 0 1 1 1 1 AIR carboxylase LAGLIDADG_3 PF14528.6 gi|452210686|ref|YP_007490800.1| - 0.12 12.7 0.0 0.23 11.8 0.0 1.5 1 0 0 1 1 1 0 LAGLIDADG-like domain ZnuA PF01297.17 gi|452210686|ref|YP_007490800.1| - 0.18 11.2 0.4 0.37 10.2 0.0 1.6 2 0 0 2 2 2 0 Zinc-uptake complex component A periplasmic DUF5359 PF17313.2 gi|452210687|ref|YP_007490801.1| - 0.17 11.9 0.1 0.24 11.4 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5359) MarR_2 PF12802.7 gi|452210688|ref|YP_007490802.1| - 3.4e-07 30.0 0.0 6.6e-07 29.1 0.0 1.4 2 0 0 2 2 2 1 MarR family MarR PF01047.22 gi|452210688|ref|YP_007490802.1| - 2.1e-06 27.5 0.1 3.5e-06 26.9 0.1 1.3 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|452210688|ref|YP_007490802.1| - 8.4e-06 25.6 0.0 1.3e-05 25.0 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|452210688|ref|YP_007490802.1| - 1.3e-05 24.7 0.1 2e-05 24.1 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_36 PF13730.6 gi|452210688|ref|YP_007490802.1| - 3.3e-05 23.8 0.1 0.00012 22.0 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|452210688|ref|YP_007490802.1| - 0.00013 21.9 0.7 0.00024 21.0 0.1 1.8 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_27 PF13463.6 gi|452210688|ref|YP_007490802.1| - 0.00022 21.6 0.1 0.00055 20.4 0.1 1.6 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_11 PF08279.12 gi|452210688|ref|YP_007490802.1| - 0.00041 20.2 0.3 0.00081 19.3 0.2 1.5 2 0 0 2 2 2 1 HTH domain TetR_C_29 PF17938.1 gi|452210688|ref|YP_007490802.1| - 0.00058 19.9 0.1 0.0007 19.7 0.1 1.1 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain HTH_20 PF12840.7 gi|452210688|ref|YP_007490802.1| - 0.00063 19.8 0.1 0.00082 19.4 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain Rrf2 PF02082.20 gi|452210688|ref|YP_007490802.1| - 0.0013 19.0 0.1 0.0021 18.3 0.1 1.3 1 0 0 1 1 1 1 Transcriptional regulator HTH_34 PF13601.6 gi|452210688|ref|YP_007490802.1| - 0.0016 18.6 0.2 0.0039 17.3 0.2 1.7 1 1 0 1 1 1 1 Winged helix DNA-binding domain Phage_rep_org_N PF09681.10 gi|452210688|ref|YP_007490802.1| - 0.002 18.0 0.1 0.0026 17.7 0.1 1.4 1 0 0 1 1 1 1 N-terminal phage replisome organiser (Phage_rep_org_N) TFIIE_alpha PF02002.17 gi|452210688|ref|YP_007490802.1| - 0.0027 17.5 0.2 0.0033 17.3 0.2 1.2 1 0 0 1 1 1 1 TFIIE alpha subunit DUF2250 PF10007.9 gi|452210688|ref|YP_007490802.1| - 0.0036 17.4 0.0 0.0044 17.1 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_5 PF01022.20 gi|452210688|ref|YP_007490802.1| - 0.0097 15.8 0.1 0.043 13.7 0.1 1.8 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family Rio2_N PF09202.11 gi|452210688|ref|YP_007490802.1| - 0.011 15.9 0.0 0.016 15.4 0.0 1.2 1 0 0 1 1 1 0 Rio2, N-terminal B-block_TFIIIC PF04182.12 gi|452210688|ref|YP_007490802.1| - 0.012 15.7 0.0 0.013 15.6 0.0 1.3 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC HxlR PF01638.17 gi|452210688|ref|YP_007490802.1| - 0.018 14.9 0.2 0.022 14.6 0.2 1.2 1 0 0 1 1 1 0 HxlR-like helix-turn-helix HTH_IclR PF09339.10 gi|452210688|ref|YP_007490802.1| - 0.023 14.5 0.0 0.065 13.0 0.1 1.6 2 0 0 2 2 2 0 IclR helix-turn-helix domain FeoC PF09012.10 gi|452210688|ref|YP_007490802.1| - 0.024 14.7 0.1 0.036 14.1 0.1 1.3 1 1 0 1 1 1 0 FeoC like transcriptional regulator HTH_28 PF13518.6 gi|452210688|ref|YP_007490802.1| - 0.027 14.6 0.0 0.045 13.9 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_29 PF13551.6 gi|452210688|ref|YP_007490802.1| - 0.028 14.4 0.0 0.045 13.8 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix GntR PF00392.21 gi|452210688|ref|YP_007490802.1| - 0.032 13.9 0.1 0.053 13.2 0.1 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family RPA_C PF08784.11 gi|452210688|ref|YP_007490802.1| - 0.05 14.3 0.0 0.082 13.6 0.0 1.3 1 0 0 1 1 1 0 Replication protein A C terminal LexA_DNA_bind PF01726.16 gi|452210688|ref|YP_007490802.1| - 0.052 13.3 0.0 0.086 12.6 0.0 1.5 1 0 0 1 1 1 0 LexA DNA binding domain DprA_WH PF17782.1 gi|452210688|ref|YP_007490802.1| - 0.054 13.6 0.0 0.079 13.1 0.0 1.2 1 0 0 1 1 1 0 DprA winged helix domain RepL PF05732.11 gi|452210688|ref|YP_007490802.1| - 0.062 12.7 0.2 0.18 11.2 0.1 1.8 1 1 1 2 2 2 0 Firmicute plasmid replication protein (RepL) AbiEi_4 PF13338.6 gi|452210688|ref|YP_007490802.1| - 0.12 12.6 0.0 0.22 11.7 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin EMC3_TMCO1 PF01956.16 gi|452210689|ref|YP_007490803.1| - 1.9e-49 167.6 9.1 2.5e-49 167.3 9.1 1.1 1 0 0 1 1 1 1 Integral membrane protein EMC3/TMCO1-like HPIH PF13323.6 gi|452210689|ref|YP_007490803.1| - 0.039 13.8 0.6 0.071 13.0 0.3 1.6 1 1 1 2 2 2 0 N-terminal domain with HPIH motif Cytidylate_kin2 PF13189.6 gi|452210690|ref|YP_007490804.1| - 8e-22 78.2 1.4 6.6e-21 75.2 1.4 1.9 1 1 0 1 1 1 1 Cytidylate kinase-like family AAA_18 PF13238.6 gi|452210690|ref|YP_007490804.1| - 2.5e-12 47.4 0.1 3.4e-12 47.0 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|452210690|ref|YP_007490804.1| - 2.3e-09 37.8 0.1 3.9e-09 37.0 0.1 1.5 1 1 0 1 1 1 1 AAA domain Cytidylate_kin PF02224.18 gi|452210690|ref|YP_007490804.1| - 3.7e-07 30.1 1.6 0.0016 18.2 0.0 2.2 1 1 1 2 2 2 2 Cytidylate kinase SKI PF01202.22 gi|452210690|ref|YP_007490804.1| - 0.00014 22.0 0.8 0.00068 19.8 0.8 1.8 1 1 0 1 1 1 1 Shikimate kinase AAA_33 PF13671.6 gi|452210690|ref|YP_007490804.1| - 0.00067 19.8 0.0 0.0032 17.6 0.0 2.0 1 1 0 1 1 1 1 AAA domain ADK PF00406.22 gi|452210690|ref|YP_007490804.1| - 0.0012 19.0 0.1 0.0027 17.8 0.0 1.6 2 0 0 2 2 2 1 Adenylate kinase dNK PF01712.19 gi|452210690|ref|YP_007490804.1| - 0.022 14.6 2.5 3.3 7.5 0.0 2.2 1 1 0 2 2 2 0 Deoxynucleoside kinase AAA_28 PF13521.6 gi|452210690|ref|YP_007490804.1| - 0.033 14.4 0.0 0.045 14.0 0.0 1.5 1 1 0 1 1 1 0 AAA domain TruB_C_2 PF16198.5 gi|452210691|ref|YP_007490805.1| - 7.4e-28 96.5 0.0 1.3e-27 95.7 0.0 1.4 1 0 0 1 1 1 1 tRNA pseudouridylate synthase B C-terminal domain TruB_N PF01509.18 gi|452210691|ref|YP_007490805.1| - 3.3e-21 76.2 1.9 6e-17 62.4 1.8 3.5 2 1 0 2 2 2 1 TruB family pseudouridylate synthase (N terminal domain) DKCLD PF08068.12 gi|452210691|ref|YP_007490805.1| - 1.3e-18 66.8 0.1 2.5e-18 65.9 0.1 1.5 1 0 0 1 1 1 1 DKCLD (NUC011) domain PUA PF01472.20 gi|452210691|ref|YP_007490805.1| - 2e-16 59.7 0.0 4e-16 58.8 0.0 1.5 1 0 0 1 1 1 1 PUA domain Ribosomal_S13 PF00416.22 gi|452210693|ref|YP_007490807.1| - 1.6e-40 138.5 0.0 1.9e-40 138.2 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S13/S18 S4 PF01479.25 gi|452210694|ref|YP_007490808.1| - 1.3e-14 53.6 0.3 9.1e-14 50.9 0.0 2.3 2 0 0 2 2 2 1 S4 domain Ribosomal_S11 PF00411.19 gi|452210695|ref|YP_007490809.1| - 1.8e-46 157.0 3.4 2.6e-46 156.6 3.4 1.2 1 0 0 1 1 1 1 Ribosomal protein S11 Pilus_CpaD PF09476.10 gi|452210695|ref|YP_007490809.1| - 0.012 15.3 0.1 0.015 15.1 0.1 1.2 1 0 0 1 1 1 0 Pilus biogenesis CpaD protein (pilus_cpaD) CBM_25 PF03423.13 gi|452210695|ref|YP_007490809.1| - 0.026 14.8 0.1 0.062 13.6 0.0 1.6 2 0 0 2 2 2 0 Carbohydrate binding domain (family 25) RNA_pol_A_bac PF01000.26 gi|452210696|ref|YP_007490810.1| - 7.5e-28 97.2 0.0 2.6e-27 95.4 0.0 1.9 2 1 0 2 2 2 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 gi|452210696|ref|YP_007490810.1| - 3.4e-13 48.8 0.0 4.8e-13 48.3 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Fer4_7 PF12838.7 gi|452210696|ref|YP_007490810.1| - 2.7e-05 24.7 24.3 0.00012 22.6 12.1 2.8 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4 PF00037.27 gi|452210696|ref|YP_007490810.1| - 6.5e-05 22.6 21.4 0.0036 17.1 1.5 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|452210696|ref|YP_007490810.1| - 0.0001 22.3 11.3 0.0001 22.3 11.3 2.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|452210696|ref|YP_007490810.1| - 0.00053 20.4 13.9 0.11 12.9 6.8 2.7 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452210696|ref|YP_007490810.1| - 0.0021 18.9 15.5 0.038 14.9 2.0 2.9 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 gi|452210696|ref|YP_007490810.1| - 0.0029 17.6 5.3 0.0029 17.6 5.3 2.8 3 0 0 3 3 2 2 4Fe-4S binding domain DUF4879 PF16219.5 gi|452210696|ref|YP_007490810.1| - 0.031 14.5 0.4 0.5 10.6 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4879) Fer4_17 PF13534.6 gi|452210696|ref|YP_007490810.1| - 0.39 11.3 19.9 0.24 12.0 3.7 3.1 2 1 2 4 4 4 0 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|452210696|ref|YP_007490810.1| - 0.39 10.9 22.7 0.055 13.6 14.0 2.9 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|452210696|ref|YP_007490810.1| - 2.5 8.3 21.6 0.039 14.1 13.4 2.2 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452210696|ref|YP_007490810.1| - 4.7 7.5 23.3 1.3 9.3 4.0 3.4 3 0 0 3 3 3 0 4Fe-4S binding domain Hexapep PF00132.24 gi|452210698|ref|YP_007490812.1| - 1.5e-19 68.9 17.5 4e-09 35.8 2.2 4.2 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|452210698|ref|YP_007490812.1| - 1.1e-09 37.8 13.5 1.2e-06 28.2 2.2 3.1 2 1 1 3 3 3 2 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 gi|452210698|ref|YP_007490812.1| - 0.023 13.6 0.5 0.059 12.3 0.5 1.7 1 1 1 2 2 2 0 L-fucokinase DUF4954 PF16314.5 gi|452210698|ref|YP_007490812.1| - 4.7 5.2 7.6 1.2 7.2 4.2 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4954) Na_H_Exchanger PF00999.21 gi|452210699|ref|YP_007490813.1| - 0.0015 17.4 0.1 0.0015 17.4 0.1 1.3 2 0 0 2 2 2 1 Sodium/hydrogen exchanger family DUF1422 PF07226.11 gi|452210699|ref|YP_007490813.1| - 0.0022 18.0 1.4 0.12 12.4 0.0 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF1422) Orf78 PF06024.12 gi|452210699|ref|YP_007490813.1| - 0.14 12.5 2.6 3.8 7.9 0.2 2.2 1 1 1 2 2 2 0 Orf78 (ac78) cobW PF02492.19 gi|452210700|ref|YP_007490814.1| - 6.8e-26 90.9 1.1 8.3e-26 90.6 1.1 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 gi|452210700|ref|YP_007490814.1| - 2.4e-06 26.7 2.2 0.011 14.8 0.5 2.1 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_16 PF13191.6 gi|452210700|ref|YP_007490814.1| - 0.0015 18.9 0.0 0.002 18.5 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain MobB PF03205.14 gi|452210700|ref|YP_007490814.1| - 0.0019 18.1 0.1 0.0051 16.7 0.0 1.8 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B ATPase_2 PF01637.18 gi|452210700|ref|YP_007490814.1| - 0.0029 17.6 0.0 0.0036 17.3 0.0 1.3 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea ATP_bind_1 PF03029.17 gi|452210700|ref|YP_007490814.1| - 0.0076 16.1 0.1 0.015 15.1 0.0 1.5 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein SRP54 PF00448.22 gi|452210700|ref|YP_007490814.1| - 0.0079 15.8 0.0 0.012 15.2 0.0 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_18 PF13238.6 gi|452210700|ref|YP_007490814.1| - 0.0081 16.7 0.1 0.015 15.8 0.1 1.5 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|452210700|ref|YP_007490814.1| - 0.012 16.0 0.1 0.068 13.6 0.0 2.1 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 gi|452210700|ref|YP_007490814.1| - 0.012 14.8 0.1 0.019 14.2 0.1 1.3 1 0 0 1 1 1 0 NB-ARC domain NTPase_1 PF03266.15 gi|452210700|ref|YP_007490814.1| - 0.013 15.5 0.3 0.047 13.6 0.0 2.0 1 1 1 2 2 2 0 NTPase TsaE PF02367.17 gi|452210700|ref|YP_007490814.1| - 0.024 14.7 0.0 0.043 13.8 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Zeta_toxin PF06414.12 gi|452210700|ref|YP_007490814.1| - 0.035 13.4 0.0 0.049 12.9 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_19 PF13245.6 gi|452210700|ref|YP_007490814.1| - 0.037 14.4 0.0 0.048 14.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|452210700|ref|YP_007490814.1| - 0.038 13.7 0.0 0.052 13.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 gi|452210700|ref|YP_007490814.1| - 0.038 13.0 0.0 0.057 12.5 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_14 PF13173.6 gi|452210700|ref|YP_007490814.1| - 0.057 13.5 0.0 0.092 12.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|452210700|ref|YP_007490814.1| - 0.057 13.2 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain Pox_A32 PF04665.12 gi|452210700|ref|YP_007490814.1| - 0.058 12.9 0.0 0.11 11.9 0.0 1.4 1 0 0 1 1 1 0 Poxvirus A32 protein AAA_22 PF13401.6 gi|452210700|ref|YP_007490814.1| - 0.058 13.7 0.0 0.15 12.3 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|452210700|ref|YP_007490814.1| - 0.061 13.5 0.0 0.11 12.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain GTP_EFTU PF00009.27 gi|452210700|ref|YP_007490814.1| - 0.065 12.8 0.2 0.51 9.9 0.0 2.1 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain KAP_NTPase PF07693.14 gi|452210700|ref|YP_007490814.1| - 0.066 12.4 0.0 0.066 12.4 0.0 1.1 1 0 0 1 1 1 0 KAP family P-loop domain HupF_HypC PF01455.18 gi|452210701|ref|YP_007490815.1| - 0.024 14.8 0.0 0.032 14.4 0.0 1.3 1 0 0 1 1 1 0 HupF/HypC family DDE_3 PF13358.6 gi|452210702|ref|YP_007490816.1| - 2.8e-23 82.3 0.1 3.8e-23 81.9 0.1 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease Tcf25 PF04910.14 gi|452210703|ref|YP_007490817.1| - 0.062 12.4 2.8 0.066 12.3 2.5 1.3 1 1 0 1 1 1 0 Transcriptional repressor TCF25 Importin_rep PF18773.1 gi|452210703|ref|YP_007490817.1| - 0.097 12.4 0.7 0.18 11.5 0.7 1.4 1 0 0 1 1 1 0 Importin 13 repeat Oxidored_q6 PF01058.22 gi|452210705|ref|YP_007490819.1| - 5.2e-33 113.7 1.5 1.5e-32 112.2 0.1 2.1 2 0 0 2 2 2 1 NADH ubiquinone oxidoreductase, 20 Kd subunit NiFe_hyd_SSU_C PF14720.6 gi|452210705|ref|YP_007490819.1| - 2.7e-29 101.4 5.2 4.3e-28 97.5 2.8 2.6 2 0 0 2 2 2 1 NiFe/NiFeSe hydrogenase small subunit C-terminal TAT_signal PF10518.9 gi|452210705|ref|YP_007490819.1| - 0.0013 18.5 0.3 0.0013 18.5 0.3 2.9 3 0 0 3 3 3 1 TAT (twin-arginine translocation) pathway signal sequence NiFeSe_Hases PF00374.19 gi|452210706|ref|YP_007490820.1| - 3.7e-83 280.1 0.0 2.3e-53 181.9 0.0 3.1 3 0 0 3 3 3 3 Nickel-dependent hydrogenase NLRC4_HD PF17889.1 gi|452210706|ref|YP_007490820.1| - 0.0075 16.6 0.0 0.015 15.6 0.0 1.4 1 0 0 1 1 1 1 NLRC4 helical domain DUF4405 PF14358.6 gi|452210707|ref|YP_007490821.1| - 0.00061 20.3 21.0 0.03 14.9 8.7 2.8 2 1 0 2 2 2 2 Domain of unknown function (DUF4405) Ni_hydr_CYTB PF01292.20 gi|452210707|ref|YP_007490821.1| - 0.0047 16.6 22.0 0.056 13.0 22.0 2.1 1 1 0 1 1 1 1 Prokaryotic cytochrome b561 PepSY_TM PF03929.16 gi|452210707|ref|YP_007490821.1| - 1 9.0 7.0 1.8 8.2 0.5 2.4 1 1 1 2 2 2 0 PepSY-associated TM region HycI PF01750.18 gi|452210708|ref|YP_007490822.1| - 9e-16 57.9 1.1 1e-15 57.7 1.1 1.0 1 0 0 1 1 1 1 Hydrogenase maturation protease PG_binding_1 PF01471.18 gi|452210710|ref|YP_007490824.1| - 5e-12 45.8 0.0 8e-12 45.2 0.0 1.3 1 0 0 1 1 1 1 Putative peptidoglycan binding domain NiFe_hyd_SSU_C PF14720.6 gi|452210711|ref|YP_007490825.1| - 6.7e-29 100.1 4.3 1.2e-28 99.3 4.3 1.4 1 0 0 1 1 1 1 NiFe/NiFeSe hydrogenase small subunit C-terminal Oxidored_q6 PF01058.22 gi|452210711|ref|YP_007490825.1| - 1.6e-23 83.0 0.0 2.3e-23 82.5 0.0 1.2 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit TAT_signal PF10518.9 gi|452210711|ref|YP_007490825.1| - 0.04 13.8 0.2 0.04 13.8 0.2 2.4 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence NiFeSe_Hases PF00374.19 gi|452210712|ref|YP_007490826.1| - 1.3e-82 278.3 0.1 1.1e-54 186.3 0.0 3.1 3 0 0 3 3 3 3 Nickel-dependent hydrogenase Ni_hydr_CYTB PF01292.20 gi|452210713|ref|YP_007490827.1| - 5e-05 23.0 20.9 0.0003 20.5 20.9 1.9 1 1 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4405 PF14358.6 gi|452210713|ref|YP_007490827.1| - 0.00053 20.5 23.4 0.041 14.4 9.8 2.7 2 1 0 2 2 2 2 Domain of unknown function (DUF4405) PsbN PF02468.15 gi|452210713|ref|YP_007490827.1| - 0.0036 17.1 2.3 0.095 12.6 0.1 2.5 2 0 0 2 2 2 2 Photosystem II reaction centre N protein (psbN) PAS PF00989.25 gi|452210714|ref|YP_007490828.1| - 3.5e-14 52.8 0.0 2.3e-12 46.9 0.0 2.4 2 0 0 2 2 2 1 PAS fold PAS_9 PF13426.7 gi|452210714|ref|YP_007490828.1| - 7.9e-13 48.6 0.8 3.9e-12 46.3 0.1 2.5 3 0 0 3 3 3 1 PAS domain PAS_4 PF08448.10 gi|452210714|ref|YP_007490828.1| - 1.6e-09 37.9 0.0 2.2e-08 34.3 0.0 2.1 2 0 0 2 2 2 1 PAS fold PAS_8 PF13188.7 gi|452210714|ref|YP_007490828.1| - 5e-09 36.0 0.0 1.1e-06 28.5 0.0 2.5 2 0 0 2 2 2 2 PAS domain MEDS PF14417.6 gi|452210714|ref|YP_007490828.1| - 1.2e-08 35.0 0.0 1.9e-08 34.3 0.0 1.4 1 0 0 1 1 1 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain PAS_3 PF08447.12 gi|452210714|ref|YP_007490828.1| - 0.018 15.3 0.0 0.048 14.0 0.0 1.7 1 0 0 1 1 1 0 PAS fold PAS_7 PF12860.7 gi|452210714|ref|YP_007490828.1| - 0.058 13.6 0.0 16 5.7 0.0 3.0 2 1 0 2 2 2 0 PAS fold CGI-121 PF08617.10 gi|452210715|ref|YP_007490829.1| - 2.6e-08 34.2 0.0 3e-08 33.9 0.0 1.1 1 0 0 1 1 1 1 Kinase binding protein CGI-121 GATase PF00117.28 gi|452210716|ref|YP_007490830.1| - 5.4e-16 58.9 0.0 7.4e-16 58.5 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|452210716|ref|YP_007490830.1| - 6.5e-05 22.8 0.0 0.0023 17.7 0.0 2.2 2 0 0 2 2 2 1 Peptidase C26 GATase_3 PF07685.14 gi|452210716|ref|YP_007490830.1| - 0.0019 17.8 0.0 0.0036 16.9 0.0 1.6 1 1 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain DJ-1_PfpI PF01965.24 gi|452210716|ref|YP_007490830.1| - 0.028 14.2 0.0 0.04 13.7 0.0 1.3 1 0 0 1 1 1 0 DJ-1/PfpI family FBPase_glpX PF03320.13 gi|452210717|ref|YP_007490831.1| - 6.1e-117 389.9 5.0 7.1e-117 389.7 5.0 1.0 1 0 0 1 1 1 1 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Oxidored_nitro PF00148.19 gi|452210717|ref|YP_007490831.1| - 0.033 12.9 0.2 0.054 12.2 0.2 1.3 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase Radical_SAM PF04055.21 gi|452210718|ref|YP_007490832.1| - 4.5e-22 79.2 0.0 5e-21 75.8 0.0 2.1 2 0 0 2 2 2 1 Radical SAM superfamily UPF0004 PF00919.20 gi|452210718|ref|YP_007490832.1| - 9.1e-18 64.1 0.1 2.1e-17 63.0 0.1 1.6 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 TRAM PF01938.20 gi|452210718|ref|YP_007490832.1| - 0.0028 17.6 0.0 0.0058 16.6 0.0 1.5 1 0 0 1 1 1 1 TRAM domain Rubrerythrin PF02915.17 gi|452210720|ref|YP_007490834.1| - 2.9e-23 82.8 3.6 5e-23 82.0 3.6 1.4 1 1 0 1 1 1 1 Rubrerythrin Ferritin PF00210.24 gi|452210720|ref|YP_007490834.1| - 0.0025 17.8 1.8 0.0032 17.4 1.8 1.3 1 1 0 1 1 1 1 Ferritin-like domain DZR PF12773.7 gi|452210720|ref|YP_007490834.1| - 0.0091 16.0 0.5 0.014 15.4 0.5 1.3 1 0 0 1 1 1 1 Double zinc ribbon NRDD PF13597.6 gi|452210720|ref|YP_007490834.1| - 0.027 13.3 2.0 0.036 12.8 0.4 1.7 2 0 0 2 2 2 0 Anaerobic ribonucleoside-triphosphate reductase zf-C3HC4_3 PF13920.6 gi|452210720|ref|YP_007490834.1| - 0.13 12.2 0.3 0.19 11.6 0.3 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RRN7 PF11781.8 gi|452210720|ref|YP_007490834.1| - 0.23 11.2 2.9 1.5 8.6 0.1 2.4 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 zinc_ribbon_2 PF13240.6 gi|452210720|ref|YP_007490834.1| - 0.23 11.2 1.7 0.55 10.0 1.7 1.6 1 1 0 1 1 1 0 zinc-ribbon domain Rubredoxin PF00301.20 gi|452210720|ref|YP_007490834.1| - 1.1 9.4 5.2 1.7 8.7 0.6 2.4 1 1 1 2 2 2 0 Rubredoxin ATP-synt_8 PF00895.20 gi|452210721|ref|YP_007490835.1| - 0.03 14.8 0.4 0.054 14.0 0.4 1.5 1 0 0 1 1 1 0 ATP synthase protein 8 CPBP PF02517.16 gi|452210722|ref|YP_007490836.1| - 5.7e-13 49.0 17.6 1.9e-12 47.4 17.6 2.1 1 1 0 1 1 1 1 CPBP intramembrane metalloprotease Upf2 PF04050.14 gi|452210723|ref|YP_007490837.1| - 0.00087 20.0 0.2 0.0011 19.7 0.2 1.1 1 0 0 1 1 1 1 Up-frameshift suppressor 2 SWIRM-assoc_3 PF16498.5 gi|452210723|ref|YP_007490837.1| - 0.025 14.8 0.0 0.047 14.0 0.0 1.4 1 0 0 1 1 1 0 SWIRM-associated domain at the C-terminal Metallophos PF00149.28 gi|452210724|ref|YP_007490838.1| - 1.4e-12 48.6 0.1 2.7e-12 47.6 0.1 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|452210724|ref|YP_007490838.1| - 7.2e-10 39.3 0.0 2e-09 37.9 0.0 1.7 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain FERM_N PF09379.10 gi|452210724|ref|YP_007490838.1| - 0.089 12.7 0.0 0.19 11.7 0.0 1.5 1 0 0 1 1 1 0 FERM N-terminal domain Bac_luciferase PF00296.20 gi|452210726|ref|YP_007490840.1| - 2.5e-58 198.0 0.0 2.9e-58 197.8 0.0 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase FAM193_C PF15914.5 gi|452210726|ref|YP_007490840.1| - 0.083 12.7 0.1 0.23 11.2 0.1 1.7 2 0 0 2 2 2 0 FAM193 family C-terminal TPD PF14811.6 gi|452210727|ref|YP_007490841.1| - 1.3e-49 167.5 0.2 1.9e-49 167.0 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function TPD sequence-motif N6_Mtase PF02384.16 gi|452210730|ref|YP_007490844.1| - 3.1e-113 378.2 0.0 4.2e-113 377.7 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.8 gi|452210730|ref|YP_007490844.1| - 1.2e-25 90.7 0.0 3e-25 89.4 0.0 1.7 1 0 0 1 1 1 1 HsdM N-terminal domain MTS PF05175.14 gi|452210730|ref|YP_007490844.1| - 7.7e-06 25.6 0.0 1.6e-05 24.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase small domain AviRa PF11599.8 gi|452210730|ref|YP_007490844.1| - 0.013 15.0 0.0 0.021 14.3 0.0 1.3 1 0 0 1 1 1 0 RRNA methyltransferase AviRa UPF0020 PF01170.18 gi|452210730|ref|YP_007490844.1| - 0.041 13.6 1.3 0.23 11.1 1.3 2.0 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 Cons_hypoth95 PF03602.15 gi|452210730|ref|YP_007490844.1| - 0.042 13.5 0.0 0.23 11.1 0.0 2.0 1 1 0 1 1 1 0 Conserved hypothetical protein 95 HTH_Crp_2 PF13545.6 gi|452210731|ref|YP_007490845.1| - 0.065 13.2 0.0 0.18 11.8 0.0 1.7 1 1 1 2 2 2 0 Crp-like helix-turn-helix domain Virulence_RhuM PF13310.6 gi|452210732|ref|YP_007490846.1| - 1.1e-116 388.5 8.0 1.4e-116 388.2 8.0 1.1 1 0 0 1 1 1 1 Virulence protein RhuM family HTH_5 PF01022.20 gi|452210732|ref|YP_007490846.1| - 0.045 13.6 0.0 0.098 12.5 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family DUF3387 PF11867.8 gi|452210733|ref|YP_007490847.1| - 3.5e-133 444.1 16.4 3.5e-133 444.1 16.4 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF3387) SWI2_SNF2 PF18766.1 gi|452210733|ref|YP_007490847.1| - 4.4e-67 226.0 0.2 4.4e-67 226.0 0.2 1.7 2 0 0 2 2 2 1 SWI2/SNF2 ATPase HSDR_N PF04313.14 gi|452210733|ref|YP_007490847.1| - 1.7e-50 171.7 0.0 1.7e-50 171.7 0.0 3.3 3 0 0 3 3 3 1 Type I restriction enzyme R protein N terminus (HSDR_N) ResIII PF04851.15 gi|452210733|ref|YP_007490847.1| - 5.1e-14 52.6 2.5 5.2e-14 52.6 0.1 2.4 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 gi|452210733|ref|YP_007490847.1| - 0.00054 20.3 0.0 0.14 12.5 0.0 3.3 2 0 0 2 2 2 1 Helicase conserved C-terminal domain HSDR_N_2 PF13588.6 gi|452210733|ref|YP_007490847.1| - 0.004 17.1 0.0 0.019 14.9 0.0 2.2 1 0 0 1 1 1 1 Type I restriction enzyme R protein N terminus (HSDR_N) Chordopox_G3 PF06129.12 gi|452210733|ref|YP_007490847.1| - 0.0093 16.7 0.3 0.54 11.0 0.1 3.0 2 0 0 2 2 2 1 Chordopoxvirus G3 protein Glyco_hydro_44 PF12891.7 gi|452210733|ref|YP_007490847.1| - 0.062 13.2 0.0 0.14 12.0 0.0 1.5 1 0 0 1 1 1 0 Glycoside hydrolase family 44 DUF2285 PF10074.9 gi|452210733|ref|YP_007490847.1| - 0.11 13.1 0.8 8.5 7.1 0.1 3.1 3 0 0 3 3 3 0 Uncharacterized conserved protein (DUF2285) Pribosyltran_N PF13793.6 gi|452210735|ref|YP_007490849.1| - 2.5e-27 95.1 0.0 8.8e-26 90.1 0.0 2.1 2 0 0 2 2 2 1 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyltran PF00156.27 gi|452210735|ref|YP_007490849.1| - 9.4e-15 54.5 0.1 1.7e-14 53.7 0.1 1.4 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Pribosyl_synth PF14572.6 gi|452210735|ref|YP_007490849.1| - 7.9e-08 32.5 0.6 1.2e-07 31.9 0.6 1.2 1 0 0 1 1 1 1 Phosphoribosyl synthetase-associated domain UPRTase PF14681.6 gi|452210735|ref|YP_007490849.1| - 1.4e-05 24.6 0.1 2.7e-05 23.7 0.1 1.4 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|452210735|ref|YP_007490849.1| - 0.0017 17.9 0.2 0.0037 16.8 0.2 1.5 1 1 0 1 1 1 1 Phosphoribosyl transferase MoaC PF01967.21 gi|452210736|ref|YP_007490850.1| - 4.1e-49 166.2 2.3 4.7e-49 166.0 2.3 1.0 1 0 0 1 1 1 1 MoaC family Phage_TAC_11 PF11836.8 gi|452210737|ref|YP_007490851.1| - 0.039 14.1 0.1 0.047 13.8 0.1 1.1 1 0 0 1 1 1 0 Phage tail tube protein, GTA-gp10 Carb_kinase PF01256.17 gi|452210738|ref|YP_007490852.1| - 8.2e-52 176.1 0.2 1.1e-51 175.6 0.2 1.2 1 0 0 1 1 1 1 Carbohydrate kinase YjeF_N PF03853.15 gi|452210738|ref|YP_007490852.1| - 2.3e-39 135.0 0.1 6.8e-38 130.2 0.0 2.2 2 0 0 2 2 2 1 YjeF-related protein N-terminus HK PF02110.15 gi|452210738|ref|YP_007490852.1| - 9.1e-11 41.6 0.0 1.4e-09 37.7 0.0 2.1 2 0 0 2 2 2 1 Hydroxyethylthiazole kinase family TrkA_N PF02254.18 gi|452210740|ref|YP_007490854.1| - 1.3e-23 83.4 0.1 3.6e-23 82.0 0.1 1.8 1 0 0 1 1 1 1 TrkA-N domain DHHA1 PF02272.19 gi|452210740|ref|YP_007490854.1| - 4.7e-15 56.2 0.2 1.8e-14 54.3 0.0 2.1 2 0 0 2 2 1 1 DHHA1 domain DHH PF01368.20 gi|452210740|ref|YP_007490854.1| - 2.5e-14 53.3 0.0 1.4e-13 50.9 0.1 2.1 2 0 0 2 2 2 1 DHH family F420_oxidored PF03807.17 gi|452210740|ref|YP_007490854.1| - 0.00054 20.5 0.0 0.0012 19.4 0.0 1.7 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent ApbA PF02558.16 gi|452210740|ref|YP_007490854.1| - 0.00057 19.5 0.0 0.0011 18.6 0.0 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_Gly3P_dh_N PF01210.23 gi|452210740|ref|YP_007490854.1| - 0.0018 18.3 0.0 0.0048 16.9 0.0 1.7 1 1 1 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus UDPG_MGDP_dh_N PF03721.14 gi|452210740|ref|YP_007490854.1| - 0.0049 16.5 0.0 0.0094 15.5 0.0 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Sacchrp_dh_NADP PF03435.18 gi|452210740|ref|YP_007490854.1| - 0.01 16.1 0.0 0.022 15.0 0.0 1.6 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Epimerase PF01370.21 gi|452210740|ref|YP_007490854.1| - 0.02 14.3 0.0 0.034 13.6 0.0 1.4 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family Methyltransf_31 PF13847.6 gi|452210740|ref|YP_007490854.1| - 0.025 14.3 0.1 0.049 13.4 0.1 1.4 1 0 0 1 1 1 0 Methyltransferase domain TyeA PF09059.10 gi|452210740|ref|YP_007490854.1| - 0.029 14.5 0.0 0.071 13.2 0.0 1.6 1 0 0 1 1 1 0 TyeA Shikimate_DH PF01488.20 gi|452210740|ref|YP_007490854.1| - 0.061 13.4 0.0 0.17 11.9 0.0 1.9 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Pyr_redox PF00070.27 gi|452210740|ref|YP_007490854.1| - 0.066 13.8 0.1 1.9 9.1 0.0 2.6 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|452210740|ref|YP_007490854.1| - 0.073 12.3 0.0 0.18 11.1 0.0 1.6 2 0 0 2 2 2 0 FAD binding domain adh_short PF00106.25 gi|452210740|ref|YP_007490854.1| - 0.082 12.3 0.0 0.17 11.3 0.0 1.5 1 0 0 1 1 1 0 short chain dehydrogenase Polysacc_synt_2 PF02719.15 gi|452210740|ref|YP_007490854.1| - 0.1 11.7 0.1 0.29 10.2 0.1 1.7 1 1 0 1 1 1 0 Polysaccharide biosynthesis protein NAD_binding_7 PF13241.6 gi|452210740|ref|YP_007490854.1| - 0.11 12.9 0.0 0.29 11.6 0.0 1.6 1 0 0 1 1 1 0 Putative NAD(P)-binding AglB_L1 PF18079.1 gi|452210741|ref|YP_007490855.1| - 7.9e-22 77.4 0.1 2.9e-21 75.6 0.1 2.1 1 0 0 1 1 1 1 Archaeal glycosylation protein B long peripheral domain STT3 PF02516.14 gi|452210741|ref|YP_007490855.1| - 2.1e-15 56.7 33.1 1.7e-14 53.6 33.1 2.1 1 1 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit PMT_2 PF13231.6 gi|452210741|ref|YP_007490855.1| - 1.9e-08 34.7 1.1 1.9e-08 34.7 1.1 4.5 2 1 1 3 3 3 1 Dolichyl-phosphate-mannose-protein mannosyltransferase Methyltransf_31 PF13847.6 gi|452210744|ref|YP_007490858.1| - 4.3e-24 85.0 0.1 5e-24 84.8 0.1 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|452210744|ref|YP_007490858.1| - 1.4e-20 73.7 0.0 2.7e-20 72.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|452210744|ref|YP_007490858.1| - 3.6e-18 66.0 0.0 5.5e-18 65.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|452210744|ref|YP_007490858.1| - 6.3e-17 61.9 0.0 8.1e-17 61.6 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|452210744|ref|YP_007490858.1| - 2.1e-12 47.6 0.0 3.3e-12 47.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|452210744|ref|YP_007490858.1| - 1.2e-08 34.6 0.1 1.5e-08 34.3 0.1 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase MTS PF05175.14 gi|452210744|ref|YP_007490858.1| - 1.4e-07 31.3 0.1 2e-07 30.7 0.1 1.4 1 1 0 1 1 1 1 Methyltransferase small domain Ubie_methyltran PF01209.18 gi|452210744|ref|YP_007490858.1| - 4.1e-06 26.3 0.0 4.7e-06 26.1 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family TPMT PF05724.11 gi|452210744|ref|YP_007490858.1| - 8e-06 25.7 0.0 8e-05 22.4 0.0 2.0 1 1 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) TehB PF03848.14 gi|452210744|ref|YP_007490858.1| - 1.1e-05 25.0 0.0 1.2e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB PrmA PF06325.13 gi|452210744|ref|YP_007490858.1| - 1.2e-05 24.9 0.0 1.8e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MetW PF07021.12 gi|452210744|ref|YP_007490858.1| - 0.00019 21.1 0.0 0.00027 20.6 0.0 1.1 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW N6_N4_Mtase PF01555.18 gi|452210744|ref|YP_007490858.1| - 0.00061 19.6 0.2 0.0047 16.7 0.0 1.9 2 0 0 2 2 2 1 DNA methylase Methyltransf_9 PF08003.11 gi|452210744|ref|YP_007490858.1| - 0.00077 18.5 0.0 0.00092 18.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) NodS PF05401.11 gi|452210744|ref|YP_007490858.1| - 0.004 16.8 0.0 0.005 16.5 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) Spermine_synth PF01564.17 gi|452210744|ref|YP_007490858.1| - 0.0052 16.2 0.4 0.011 15.2 0.4 1.6 1 1 0 1 1 1 1 Spermine/spermidine synthase domain Methyltransf_29 PF03141.16 gi|452210744|ref|YP_007490858.1| - 0.0078 14.8 0.0 0.0078 14.8 0.0 1.1 1 0 0 1 1 1 1 Putative S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_32 PF13679.6 gi|452210744|ref|YP_007490858.1| - 0.0092 16.0 0.1 0.011 15.7 0.1 1.3 1 1 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 gi|452210744|ref|YP_007490858.1| - 0.014 15.2 0.5 0.018 14.8 0.1 1.4 2 0 0 2 2 1 0 Met-10+ like-protein RrnaAD PF00398.20 gi|452210744|ref|YP_007490858.1| - 0.017 14.2 0.2 0.034 13.2 0.0 1.6 2 0 0 2 2 2 0 Ribosomal RNA adenine dimethylase Methyltransf_18 PF12847.7 gi|452210744|ref|YP_007490858.1| - 0.019 14.9 0.0 0.033 14.1 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Pox_MCEL PF03291.16 gi|452210744|ref|YP_007490858.1| - 0.023 13.8 0.2 0.044 12.9 0.1 1.7 1 1 0 1 1 1 0 mRNA capping enzyme PCMT PF01135.19 gi|452210744|ref|YP_007490858.1| - 0.087 12.6 0.0 0.12 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) PELOTA_1 PF15608.6 gi|452210744|ref|YP_007490858.1| - 0.11 12.4 0.0 0.29 11.0 0.0 1.7 1 0 0 1 1 1 0 PELOTA RNA binding domain Methyltransf_15 PF09445.10 gi|452210744|ref|YP_007490858.1| - 0.12 11.9 0.0 0.24 10.9 0.0 1.6 2 0 0 2 2 2 0 RNA cap guanine-N2 methyltransferase ABC_tran PF00005.27 gi|452210745|ref|YP_007490859.1| - 2.6e-17 63.6 0.0 1.1e-16 61.6 0.0 2.2 1 1 0 1 1 1 1 ABC transporter Hexapep PF00132.24 gi|452210745|ref|YP_007490859.1| - 9.1e-10 37.9 13.2 7.3e-08 31.8 7.1 3.3 2 1 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|452210745|ref|YP_007490859.1| - 5.2e-09 35.7 7.5 5.2e-09 35.7 7.5 2.4 2 0 0 2 2 2 1 Hexapeptide repeat of succinyl-transferase AAA_29 PF13555.6 gi|452210745|ref|YP_007490859.1| - 4.9e-06 26.2 0.0 9.6e-06 25.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_21 PF13304.6 gi|452210745|ref|YP_007490859.1| - 7.6e-05 22.7 0.3 0.0043 16.9 0.2 2.7 2 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|452210745|ref|YP_007490859.1| - 0.00035 21.1 1.0 0.00088 19.8 0.5 1.9 2 1 0 2 2 2 1 AAA domain AAA_15 PF13175.6 gi|452210745|ref|YP_007490859.1| - 0.0015 18.3 1.5 0.0015 18.3 1.5 2.1 2 1 0 2 2 2 1 AAA ATPase domain SMC_N PF02463.19 gi|452210745|ref|YP_007490859.1| - 0.0021 17.5 0.3 0.016 14.7 0.2 2.2 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_30 PF13604.6 gi|452210745|ref|YP_007490859.1| - 0.013 15.3 0.0 0.05 13.3 0.0 1.9 1 1 0 1 1 1 0 AAA domain FBA_2 PF07735.17 gi|452210745|ref|YP_007490859.1| - 0.026 14.6 3.1 3.9 7.7 1.2 2.5 2 0 0 2 2 2 0 F-box associated NTPase_1 PF03266.15 gi|452210745|ref|YP_007490859.1| - 0.041 13.8 0.2 7.1 6.5 0.1 2.5 2 0 0 2 2 2 0 NTPase AAA PF00004.29 gi|452210745|ref|YP_007490859.1| - 0.074 13.5 0.1 0.31 11.5 0.1 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|452210745|ref|YP_007490859.1| - 0.081 13.2 0.1 0.85 9.9 0.1 2.5 1 1 1 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 gi|452210745|ref|YP_007490859.1| - 0.11 12.5 0.1 0.3 11.0 0.0 1.7 2 0 0 2 2 1 0 RsgA GTPase RNA_helicase PF00910.22 gi|452210745|ref|YP_007490859.1| - 0.11 12.9 0.1 1.8 9.0 0.0 2.7 2 0 0 2 2 2 0 RNA helicase DUF87 PF01935.17 gi|452210745|ref|YP_007490859.1| - 0.11 12.5 1.9 0.32 11.1 0.2 2.5 2 1 1 3 3 3 0 Helicase HerA, central domain ATP-synt_ab PF00006.25 gi|452210745|ref|YP_007490859.1| - 0.14 11.8 0.0 0.21 11.2 0.0 1.4 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_16 PF13191.6 gi|452210745|ref|YP_007490859.1| - 0.23 11.8 0.0 0.38 11.1 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain ABC2_membrane PF01061.24 gi|452210746|ref|YP_007490860.1| - 8.3e-20 71.1 28.6 8.3e-20 71.1 28.6 1.3 2 0 0 2 2 2 1 ABC-2 type transporter NTP_transferase PF00483.23 gi|452210747|ref|YP_007490861.1| - 6.4e-57 193.0 0.0 7.7e-57 192.7 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|452210747|ref|YP_007490861.1| - 4e-12 46.8 0.0 4.2e-12 46.7 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.19 gi|452210747|ref|YP_007490861.1| - 0.043 13.7 0.0 0.07 13.0 0.0 1.2 1 0 0 1 1 1 0 Cytidylyltransferase Glycos_transf_2 PF00535.26 gi|452210749|ref|YP_007490863.1| - 1e-23 84.0 0.0 1.9e-23 83.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|452210749|ref|YP_007490863.1| - 6.1e-10 39.4 0.0 1.7e-09 37.9 0.0 1.6 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|452210749|ref|YP_007490863.1| - 3.1e-05 23.6 0.1 8.1e-05 22.2 0.0 1.7 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_tranf_2_5 PF13712.6 gi|452210749|ref|YP_007490863.1| - 0.00018 21.3 0.1 0.00064 19.5 0.0 1.9 2 0 0 2 2 2 1 Glycosyltransferase like family DUF4858 PF16150.5 gi|452210749|ref|YP_007490863.1| - 0.044 13.8 0.0 0.076 13.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4858) Glycos_transf_1 PF00534.20 gi|452210750|ref|YP_007490864.1| - 3.4e-45 153.7 0.3 7.3e-45 152.6 0.2 1.7 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|452210750|ref|YP_007490864.1| - 6.4e-33 114.0 0.0 1.2e-32 113.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|452210750|ref|YP_007490864.1| - 2.3e-16 60.3 0.0 3.6e-16 59.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_2 PF13477.6 gi|452210750|ref|YP_007490864.1| - 3.2e-09 37.0 0.1 2.4e-08 34.1 0.0 2.2 2 0 0 2 2 2 1 Glycosyl transferase 4-like Glyco_trans_1_2 PF13524.6 gi|452210750|ref|YP_007490864.1| - 6.9e-08 32.8 0.0 1.8e-07 31.5 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|452210750|ref|YP_007490864.1| - 0.00015 22.2 0.0 0.00028 21.4 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_transf_5 PF08323.11 gi|452210750|ref|YP_007490864.1| - 0.0009 19.0 0.0 1.2 8.8 0.0 2.5 1 1 1 2 2 2 2 Starch synthase catalytic domain DUF3880 PF12996.7 gi|452210750|ref|YP_007490864.1| - 0.015 15.4 0.0 0.039 14.0 0.0 1.7 1 0 0 1 1 1 0 DUF based on E. rectale Gene description (DUF3880) DUF2325 PF10087.9 gi|452210750|ref|YP_007490864.1| - 0.12 12.5 0.1 1.6 8.9 0.0 2.6 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2325) Methyltransf_11 PF08241.12 gi|452210752|ref|YP_007490866.1| - 2.4e-20 73.0 0.0 3.4e-20 72.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|452210752|ref|YP_007490866.1| - 1.7e-17 63.8 0.0 2.1e-17 63.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|452210752|ref|YP_007490866.1| - 8e-17 61.7 0.0 1.2e-16 61.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|452210752|ref|YP_007490866.1| - 1.1e-16 61.1 0.0 1.3e-16 60.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|452210752|ref|YP_007490866.1| - 1.3e-13 51.0 0.0 1.7e-13 50.6 0.0 1.1 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_12 PF08242.12 gi|452210752|ref|YP_007490866.1| - 1.1e-12 48.5 0.0 1.9e-12 47.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|452210752|ref|YP_007490866.1| - 0.00012 21.5 0.0 0.00017 21.0 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_8 PF05148.15 gi|452210752|ref|YP_007490866.1| - 0.00013 21.9 0.0 0.00018 21.4 0.0 1.2 1 0 0 1 1 1 1 Hypothetical methyltransferase NodS PF05401.11 gi|452210752|ref|YP_007490866.1| - 0.00016 21.3 0.0 0.00021 21.0 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) MTS PF05175.14 gi|452210752|ref|YP_007490866.1| - 0.00077 19.1 0.0 0.0011 18.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|452210752|ref|YP_007490866.1| - 0.00089 18.7 0.0 0.0012 18.3 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_32 PF13679.6 gi|452210752|ref|YP_007490866.1| - 0.025 14.6 0.0 0.033 14.2 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain AdoMet_MTase PF07757.13 gi|452210752|ref|YP_007490866.1| - 0.062 13.6 0.0 0.11 12.9 0.0 1.4 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase DREV PF05219.12 gi|452210752|ref|YP_007490866.1| - 0.071 12.2 0.0 0.082 12.0 0.0 1.2 1 0 0 1 1 1 0 DREV methyltransferase LPG_synthase_TM PF03706.13 gi|452210753|ref|YP_007490867.1| - 1.8e-34 119.7 10.4 2.3e-34 119.3 10.4 1.1 1 0 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region DUF4191 PF13829.6 gi|452210753|ref|YP_007490867.1| - 0.067 12.5 1.0 0.1 11.9 0.1 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4191) Ndc1_Nup PF09531.10 gi|452210753|ref|YP_007490867.1| - 4.1 6.0 8.3 5.6 5.5 8.3 1.3 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Glycos_transf_2 PF00535.26 gi|452210754|ref|YP_007490868.1| - 1.8e-31 109.2 0.1 2.5e-31 108.8 0.1 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|452210754|ref|YP_007490868.1| - 2.7e-10 40.2 1.0 3.1e-10 40.0 0.1 1.5 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.6 gi|452210754|ref|YP_007490868.1| - 5e-09 36.4 0.0 7e-09 35.9 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_7N PF13733.6 gi|452210754|ref|YP_007490868.1| - 0.1 12.2 0.0 0.18 11.5 0.0 1.4 1 0 0 1 1 1 0 N-terminal region of glycosyl transferase group 7 Glycos_transf_1 PF00534.20 gi|452210755|ref|YP_007490869.1| - 7.8e-35 119.9 1.1 1.2e-34 119.4 1.1 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|452210755|ref|YP_007490869.1| - 7e-26 91.2 0.1 1.5e-25 90.2 0.1 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|452210755|ref|YP_007490869.1| - 1.7e-21 77.0 0.0 3.5e-21 75.9 0.0 1.6 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|452210755|ref|YP_007490869.1| - 1.8e-12 48.0 0.0 2.6e-12 47.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 gi|452210755|ref|YP_007490869.1| - 1e-06 29.0 0.0 2e-06 28.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Epimerase_2 PF02350.19 gi|452210755|ref|YP_007490869.1| - 0.0086 15.0 0.0 0.011 14.7 0.0 1.2 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase DUF309 PF03745.14 gi|452210755|ref|YP_007490869.1| - 0.051 13.3 0.1 0.11 12.2 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF309) Sir1 PF11603.8 gi|452210755|ref|YP_007490869.1| - 0.12 12.8 0.1 0.23 12.0 0.1 1.4 1 0 0 1 1 1 0 Regulatory protein Sir1 Glycos_transf_2 PF00535.26 gi|452210756|ref|YP_007490870.1| - 1.8e-21 76.7 0.0 2.6e-21 76.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.6 gi|452210756|ref|YP_007490870.1| - 0.0062 16.0 0.0 0.019 14.5 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferase family 21 Glyco_tranf_2_3 PF13641.6 gi|452210756|ref|YP_007490870.1| - 0.011 15.7 0.0 0.013 15.4 0.0 1.3 1 1 0 1 1 1 0 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|452210756|ref|YP_007490870.1| - 0.13 12.8 0.0 0.32 11.5 0.0 1.6 1 1 0 1 1 1 0 Glycosyl transferase family 2 FMN_red PF03358.15 gi|452210757|ref|YP_007490871.1| - 1.8e-14 53.8 0.1 2.5e-14 53.3 0.1 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|452210757|ref|YP_007490871.1| - 0.0035 17.1 0.0 0.0049 16.6 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold TF_Zn_Ribbon PF08271.12 gi|452210758|ref|YP_007490872.1| - 0.0044 16.5 0.2 0.0067 15.9 0.2 1.2 1 0 0 1 1 1 1 TFIIB zinc-binding DNA_ligase_ZBD PF03119.16 gi|452210758|ref|YP_007490872.1| - 0.011 15.8 1.1 0.028 14.4 1.1 1.7 1 1 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain DUF2256 PF10013.9 gi|452210758|ref|YP_007490872.1| - 0.021 14.9 2.1 0.07 13.3 2.1 1.9 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2256) Lar_restr_allev PF14354.6 gi|452210758|ref|YP_007490872.1| - 0.023 15.1 0.3 0.028 14.8 0.3 1.1 1 0 0 1 1 1 0 Restriction alleviation protein Lar GFA PF04828.14 gi|452210758|ref|YP_007490872.1| - 0.049 14.0 0.2 0.051 13.9 0.2 1.0 1 0 0 1 1 1 0 Glutathione-dependent formaldehyde-activating enzyme Cys_rich_CPCC PF14206.6 gi|452210758|ref|YP_007490872.1| - 0.053 13.3 0.0 0.08 12.8 0.0 1.3 1 0 0 1 1 1 0 Cysteine-rich CPCC Zn-C2H2_12 PF18112.1 gi|452210758|ref|YP_007490872.1| - 0.13 12.7 3.2 0.25 11.8 1.4 2.1 2 0 0 2 2 2 0 Autophagy receptor zinc finger-C2H2 domain zf-C2H2_6 PF13912.6 gi|452210758|ref|YP_007490872.1| - 0.84 9.7 3.0 1 9.4 0.4 2.1 2 0 0 2 2 2 0 C2H2-type zinc finger Na_K-ATPase PF00287.18 gi|452210759|ref|YP_007490873.1| - 0.074 12.2 2.3 0.091 11.9 2.3 1.1 1 0 0 1 1 1 0 Sodium / potassium ATPase beta chain Glyco_transf_36 PF06165.11 gi|452210760|ref|YP_007490874.1| - 0.0016 17.9 0.1 0.004 16.6 0.1 1.7 1 1 0 1 1 1 1 Glycosyltransferase family 36 Glyco_hydro_15 PF00723.21 gi|452210760|ref|YP_007490874.1| - 0.014 14.2 0.0 0.05 12.4 0.0 1.7 2 0 0 2 2 2 0 Glycosyl hydrolases family 15 Acetyltransf_1 PF00583.25 gi|452210761|ref|YP_007490875.1| - 2.8e-07 30.8 0.1 4.5e-06 26.9 0.0 2.0 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|452210761|ref|YP_007490875.1| - 1.1e-06 29.0 0.5 0.00091 19.6 0.1 2.3 1 1 1 2 2 2 2 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|452210761|ref|YP_007490875.1| - 0.00073 19.5 0.1 0.013 15.4 0.0 2.0 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain NTP_transf_2 PF01909.23 gi|452210762|ref|YP_007490876.1| - 4.9e-05 23.5 0.0 0.00015 21.9 0.0 1.9 1 0 0 1 1 1 1 Nucleotidyltransferase domain DUF4096 PF13340.6 gi|452210763|ref|YP_007490877.1| - 4.2e-26 91.0 0.2 1.1e-25 89.7 0.2 1.7 1 0 0 1 1 1 1 Putative transposase of IS4/5 family (DUF4096) DDE_Tnp_1 PF01609.21 gi|452210763|ref|YP_007490877.1| - 9.9e-18 64.6 0.2 1.6e-17 63.9 0.2 1.3 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1_2 PF13586.6 gi|452210763|ref|YP_007490877.1| - 1.3e-12 47.9 1.3 1.3e-12 47.9 1.3 1.6 2 0 0 2 2 2 1 Transposase DDE domain PKD PF00801.20 gi|452210764|ref|YP_007490878.1| - 7.1e-08 32.2 3.2 7.6e-08 32.1 0.8 2.2 2 0 0 2 2 2 1 PKD domain NPCBM_assoc PF10633.9 gi|452210764|ref|YP_007490878.1| - 7.2e-06 26.2 0.9 0.075 13.3 0.2 2.7 1 1 1 2 2 2 2 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF11 PF01345.18 gi|452210764|ref|YP_007490878.1| - 0.0042 17.4 0.3 0.011 16.0 0.3 1.7 1 0 0 1 1 1 1 Domain of unknown function DUF11 bMG10 PF17973.1 gi|452210764|ref|YP_007490878.1| - 0.08 13.1 0.1 0.25 11.6 0.0 1.8 2 0 0 2 2 2 0 Bacterial Alpha-2-macroglobulin MG10 domain PKD_3 PF16820.5 gi|452210764|ref|YP_007490878.1| - 0.25 11.1 2.3 0.3 10.8 0.2 2.3 2 0 0 2 2 2 0 PKD-like domain DUF4139 PF13598.6 gi|452210765|ref|YP_007490879.1| - 1.5e-08 34.7 2.1 5e-08 32.9 2.1 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF4139) DUF4140 PF13600.6 gi|452210765|ref|YP_007490879.1| - 0.00039 20.8 0.3 0.0022 18.4 0.0 2.3 2 0 0 2 2 2 1 N-terminal domain of unknown function (DUF4140) LSM PF01423.22 gi|452210765|ref|YP_007490879.1| - 0.0096 15.6 0.0 0.022 14.4 0.0 1.6 1 0 0 1 1 1 1 LSM domain Top6b_C PF18000.1 gi|452210765|ref|YP_007490879.1| - 0.072 13.3 2.1 0.085 13.0 0.5 2.1 2 0 0 2 2 2 0 Type 2 DNA topoisomerase 6 subunit B C-terminal domain DsbD PF02683.15 gi|452210766|ref|YP_007490880.1| - 4.5e-21 75.7 4.8 4.8e-21 75.6 4.8 1.0 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DsbD_2 PF13386.6 gi|452210766|ref|YP_007490880.1| - 5.6e-09 36.2 3.9 6.3e-09 36.1 3.9 1.1 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region Pox_P21 PF05313.12 gi|452210766|ref|YP_007490880.1| - 0.014 15.0 0.4 0.016 14.8 0.4 1.1 1 0 0 1 1 1 0 Poxvirus P21 membrane protein HTH_5 PF01022.20 gi|452210767|ref|YP_007490881.1| - 3.9e-14 52.2 0.1 6.9e-14 51.5 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|452210767|ref|YP_007490881.1| - 2e-10 40.6 0.0 2.7e-10 40.1 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain Penicillinase_R PF03965.16 gi|452210767|ref|YP_007490881.1| - 0.00068 20.0 0.2 0.0017 18.7 0.2 1.6 1 1 0 1 1 1 1 Penicillinase repressor HTH_24 PF13412.6 gi|452210767|ref|YP_007490881.1| - 0.0028 17.2 0.0 0.2 11.3 0.0 2.4 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_36 PF13730.6 gi|452210767|ref|YP_007490881.1| - 0.029 14.3 0.1 0.056 13.4 0.1 1.6 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_34 PF13601.6 gi|452210767|ref|YP_007490881.1| - 0.03 14.5 0.1 0.045 13.9 0.1 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain Cdc6_C PF09079.11 gi|452210767|ref|YP_007490881.1| - 0.036 14.0 0.0 0.073 13.1 0.0 1.5 1 0 0 1 1 1 0 CDC6, C terminal winged helix domain Methyltransf_31 PF13847.6 gi|452210768|ref|YP_007490882.1| - 3.5e-40 137.3 0.0 5e-40 136.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|452210768|ref|YP_007490882.1| - 4e-24 85.1 0.0 8.8e-24 84.0 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|452210768|ref|YP_007490882.1| - 2.7e-23 82.4 0.0 7.4e-23 81.0 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|452210768|ref|YP_007490882.1| - 7.5e-20 71.3 0.0 1.3e-19 70.5 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|452210768|ref|YP_007490882.1| - 2.8e-13 50.0 0.0 4e-13 49.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|452210768|ref|YP_007490882.1| - 4.2e-12 46.3 0.0 6.1e-12 45.7 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_12 PF08242.12 gi|452210768|ref|YP_007490882.1| - 7e-12 46.0 0.0 1.3e-11 45.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|452210768|ref|YP_007490882.1| - 1.7e-07 31.0 0.0 2.6e-07 30.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain UPF0020 PF01170.18 gi|452210768|ref|YP_007490882.1| - 4.8e-07 29.7 0.0 7.6e-07 29.0 0.0 1.3 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 PrmA PF06325.13 gi|452210768|ref|YP_007490882.1| - 2.4e-06 27.2 0.0 3.6e-06 26.6 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_8 PF05148.15 gi|452210768|ref|YP_007490882.1| - 1.5e-05 25.0 0.2 4e-05 23.6 0.2 1.7 1 1 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_15 PF09445.10 gi|452210768|ref|YP_007490882.1| - 3.5e-05 23.4 0.0 5.1e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_32 PF13679.6 gi|452210768|ref|YP_007490882.1| - 4.7e-05 23.4 0.0 7.2e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|452210768|ref|YP_007490882.1| - 8.4e-05 22.0 0.0 0.00013 21.3 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase FtsJ PF01728.19 gi|452210768|ref|YP_007490882.1| - 0.0011 19.1 0.0 0.0014 18.7 0.0 1.2 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_4 PF02390.17 gi|452210768|ref|YP_007490882.1| - 0.0023 17.5 0.0 0.0058 16.1 0.0 1.7 1 1 1 2 2 2 1 Putative methyltransferase Methyltransf_18 PF12847.7 gi|452210768|ref|YP_007490882.1| - 0.014 15.3 0.0 0.023 14.6 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain CheR PF01739.18 gi|452210768|ref|YP_007490882.1| - 0.021 14.3 0.1 0.64 9.5 0.0 2.3 1 1 1 2 2 2 0 CheR methyltransferase, SAM binding domain DOT1 PF08123.13 gi|452210768|ref|YP_007490882.1| - 0.076 12.5 0.0 0.11 12.1 0.0 1.3 1 0 0 1 1 1 0 Histone methylation protein DOT1 Methyltransf_3 PF01596.17 gi|452210768|ref|YP_007490882.1| - 0.1 11.8 0.0 0.16 11.1 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase LMWPc PF01451.21 gi|452210769|ref|YP_007490883.1| - 1.4e-08 35.3 0.0 1.7e-08 34.9 0.0 1.1 1 0 0 1 1 1 1 Low molecular weight phosphotyrosine protein phosphatase ArsP_1 PF03773.13 gi|452210770|ref|YP_007490884.1| - 2e-62 211.0 24.6 2.3e-62 210.8 24.6 1.0 1 0 0 1 1 1 1 Predicted permease HTH_5 PF01022.20 gi|452210771|ref|YP_007490885.1| - 5.6e-19 67.7 1.0 1.6e-18 66.2 1.4 1.6 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|452210771|ref|YP_007490885.1| - 1.9e-15 56.7 0.1 2.9e-15 56.1 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|452210771|ref|YP_007490885.1| - 0.0006 19.6 0.0 0.0017 18.2 0.0 1.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB DUF1387 PF07139.11 gi|452210771|ref|YP_007490885.1| - 0.0085 15.9 0.4 0.012 15.4 0.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1387) HTH_24 PF13412.6 gi|452210771|ref|YP_007490885.1| - 0.016 14.7 0.1 0.045 13.3 0.1 1.8 1 1 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_34 PF13601.6 gi|452210771|ref|YP_007490885.1| - 0.016 15.3 0.2 0.067 13.4 0.1 1.9 2 0 0 2 2 2 0 Winged helix DNA-binding domain PaaX PF07848.12 gi|452210771|ref|YP_007490885.1| - 0.017 15.3 0.0 0.036 14.3 0.0 1.6 1 0 0 1 1 1 0 PaaX-like protein MarR_2 PF12802.7 gi|452210771|ref|YP_007490885.1| - 0.029 14.2 0.1 0.071 13.0 0.1 1.7 1 0 0 1 1 1 0 MarR family HTH_Crp_2 PF13545.6 gi|452210771|ref|YP_007490885.1| - 0.088 12.8 0.7 0.4 10.7 0.1 2.4 2 2 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_5 PF01022.20 gi|452210774|ref|YP_007490888.1| - 5e-11 42.3 1.8 3.7e-08 33.1 0.0 2.9 3 1 1 4 4 4 2 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|452210774|ref|YP_007490888.1| - 6.8e-11 42.1 0.0 1.3e-10 41.2 0.0 1.4 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_CodY PF08222.11 gi|452210774|ref|YP_007490888.1| - 0.002 17.6 0.4 0.0088 15.6 0.0 2.0 2 0 0 2 2 2 1 CodY helix-turn-helix domain HTH_34 PF13601.6 gi|452210774|ref|YP_007490888.1| - 0.0024 18.0 0.0 0.0045 17.1 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain Cdc6_C PF09079.11 gi|452210774|ref|YP_007490888.1| - 0.0068 16.4 0.0 0.012 15.5 0.0 1.5 1 0 0 1 1 1 1 CDC6, C terminal winged helix domain TrmB PF01978.19 gi|452210774|ref|YP_007490888.1| - 0.069 13.0 0.0 0.25 11.3 0.0 2.0 2 1 1 3 3 3 0 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|452210774|ref|YP_007490888.1| - 0.12 12.0 4.1 9.2 5.9 0.0 3.3 3 1 1 4 4 4 0 Winged helix-turn-helix DNA-binding ArsP_1 PF03773.13 gi|452210776|ref|YP_007490890.1| - 3.8e-71 239.6 22.3 4.3e-71 239.5 22.3 1.0 1 0 0 1 1 1 1 Predicted permease Thioredoxin_3 PF13192.6 gi|452210777|ref|YP_007490891.1| - 6.9e-29 99.7 3.4 7.5e-29 99.6 3.4 1.0 1 0 0 1 1 1 1 Thioredoxin domain Glutaredoxin PF00462.24 gi|452210777|ref|YP_007490891.1| - 1.5e-06 28.3 0.1 2.3e-06 27.7 0.1 1.4 1 0 0 1 1 1 1 Glutaredoxin DUF836 PF05768.14 gi|452210777|ref|YP_007490891.1| - 0.0014 19.0 0.1 0.0015 18.9 0.1 1.1 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) ArsD PF06953.11 gi|452210777|ref|YP_007490891.1| - 0.0027 18.1 0.0 0.0031 17.9 0.0 1.2 1 0 0 1 1 1 1 Arsenical resistance operon trans-acting repressor ArsD Thioredoxin_4 PF13462.6 gi|452210777|ref|YP_007490891.1| - 0.0042 17.3 1.0 2.2 8.4 0.0 2.0 1 1 1 2 2 2 2 Thioredoxin BAT PF15915.5 gi|452210777|ref|YP_007490891.1| - 0.016 15.1 0.0 0.018 14.9 0.0 1.1 1 0 0 1 1 1 0 GAF and HTH_10 associated domain Thioredoxin_2 PF13098.6 gi|452210777|ref|YP_007490891.1| - 0.016 15.7 0.7 0.25 11.8 0.7 2.0 1 1 0 1 1 1 0 Thioredoxin-like domain Thioredoxin PF00085.20 gi|452210777|ref|YP_007490891.1| - 0.065 13.2 0.1 0.065 13.2 0.1 1.1 1 0 0 1 1 1 0 Thioredoxin MtrA PF04208.14 gi|452210779|ref|YP_007490893.1| - 1.2e-45 155.2 0.0 1.5e-45 154.9 0.0 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit A Disaggr_assoc PF08480.10 gi|452210780|ref|YP_007490894.1| - 5.8e-79 264.4 11.5 5.8e-79 264.4 11.5 2.6 2 1 1 3 3 3 1 Disaggregatase related Beta_helix PF13229.6 gi|452210780|ref|YP_007490894.1| - 8.8e-15 54.9 43.3 3.1e-12 46.6 24.9 3.2 1 1 1 2 2 2 2 Right handed beta helix region DUF5123 PF17161.4 gi|452210780|ref|YP_007490894.1| - 0.00012 23.1 6.5 0.00012 23.1 6.5 4.4 2 2 0 3 3 3 1 Domain of unknown function (DUF5123) RP854 PF17460.2 gi|452210780|ref|YP_007490894.1| - 0.064 13.0 0.7 0.15 11.8 0.4 1.8 2 0 0 2 2 2 0 Uncharacterized protein RP854 Z1 PF10593.9 gi|452210782|ref|YP_007490896.1| - 0.036 13.6 0.1 0.036 13.6 0.1 1.0 1 0 0 1 1 1 0 Z1 domain DsrH PF04077.12 gi|452210783|ref|YP_007490897.1| - 6.8e-07 29.3 0.0 9.3e-07 28.9 0.0 1.2 1 0 0 1 1 1 1 DsrH like protein DrsE PF02635.15 gi|452210784|ref|YP_007490898.1| - 1.4e-09 38.3 0.0 1.6e-09 38.1 0.0 1.1 1 0 0 1 1 1 1 DsrE/DsrF-like family DsrH PF04077.12 gi|452210784|ref|YP_007490898.1| - 0.017 15.2 0.0 0.036 14.2 0.0 1.6 1 1 0 1 1 1 0 DsrH like protein DrsE PF02635.15 gi|452210785|ref|YP_007490899.1| - 4.5e-21 75.4 0.0 5.2e-21 75.2 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family FeS PF04060.13 gi|452210786|ref|YP_007490900.1| - 4.9e-13 48.5 4.4 7e-13 48.0 2.4 2.1 2 0 0 2 2 2 1 Putative Fe-S cluster HTH_20 PF12840.7 gi|452210786|ref|YP_007490900.1| - 1.8e-08 34.3 0.0 1.1e-07 31.8 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|452210786|ref|YP_007490900.1| - 9.4e-08 31.8 0.0 2.5e-07 30.5 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family YhfH PF14149.6 gi|452210786|ref|YP_007490900.1| - 0.0073 16.3 0.1 0.014 15.3 0.1 1.4 1 0 0 1 1 1 1 YhfH-like protein TBP PF00352.21 gi|452210786|ref|YP_007490900.1| - 0.0075 16.2 0.0 0.017 15.1 0.0 1.6 1 0 0 1 1 1 1 Transcription factor TFIID (or TATA-binding protein, TBP) Ribosomal_S10 PF00338.22 gi|452210787|ref|YP_007490901.1| - 3.3e-27 94.6 0.0 3.7e-27 94.4 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e PriA_C PF18074.1 gi|452210787|ref|YP_007490901.1| - 0.052 14.4 0.0 0.12 13.2 0.0 1.6 2 0 0 2 2 2 0 Primosomal protein N C-terminal domain GTP_EFTU PF00009.27 gi|452210788|ref|YP_007490902.1| - 4e-57 192.9 0.1 5.8e-57 192.4 0.1 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 gi|452210788|ref|YP_007490902.1| - 1.6e-36 125.0 0.1 3.6e-36 123.9 0.1 1.6 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 gi|452210788|ref|YP_007490902.1| - 8.7e-16 58.1 2.1 4.7e-15 55.7 1.8 2.4 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|452210788|ref|YP_007490902.1| - 1.3e-05 25.3 0.0 0.00018 21.6 0.0 2.3 1 1 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU_D4 PF14578.6 gi|452210788|ref|YP_007490902.1| - 0.00095 19.0 1.2 0.0024 17.7 1.2 1.7 1 0 0 1 1 1 1 Elongation factor Tu domain 4 Gtr1_RagA PF04670.12 gi|452210788|ref|YP_007490902.1| - 0.0022 17.4 0.0 0.045 13.1 0.0 2.1 2 0 0 2 2 2 1 Gtr1/RagA G protein conserved region Dynamin_N PF00350.23 gi|452210788|ref|YP_007490902.1| - 0.04 14.0 0.0 2.4 8.2 0.0 2.3 1 1 0 1 1 1 0 Dynamin family Roc PF08477.13 gi|452210788|ref|YP_007490902.1| - 0.045 14.0 0.0 3.7 7.8 0.0 2.3 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase Septin PF00735.18 gi|452210788|ref|YP_007490902.1| - 0.058 12.7 0.0 0.16 11.2 0.0 1.6 1 1 0 1 1 1 0 Septin GTP_EFTU PF00009.27 gi|452210789|ref|YP_007490903.1| - 1.8e-64 216.9 0.3 3.3e-64 216.0 0.3 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 gi|452210789|ref|YP_007490903.1| - 4.7e-25 87.7 0.6 2.3e-23 82.3 0.0 3.0 2 1 1 3 3 3 1 Elongation factor G, domain IV EFG_II PF14492.6 gi|452210789|ref|YP_007490903.1| - 4.5e-24 84.3 1.2 4.5e-24 84.3 1.2 1.9 2 0 0 2 2 2 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.25 gi|452210789|ref|YP_007490903.1| - 1.4e-16 60.6 0.7 4.8e-16 58.9 0.7 2.0 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|452210789|ref|YP_007490903.1| - 5e-05 23.4 0.1 0.00016 21.7 0.1 1.9 1 0 0 1 1 1 1 50S ribosome-binding GTPase RF3_C PF16658.5 gi|452210789|ref|YP_007490903.1| - 0.00073 19.4 0.0 0.0017 18.2 0.0 1.6 1 0 0 1 1 1 1 Class II release factor RF3, C-terminal domain Ras PF00071.22 gi|452210789|ref|YP_007490903.1| - 0.069 12.7 0.1 0.14 11.7 0.1 1.5 1 0 0 1 1 1 0 Ras family TRADD_N PF09034.10 gi|452210789|ref|YP_007490903.1| - 0.13 12.3 0.1 0.27 11.3 0.1 1.5 1 0 0 1 1 1 0 TRADD, N-terminal domain RsgA_GTPase PF03193.16 gi|452210789|ref|YP_007490903.1| - 0.15 12.0 1.1 1.6 8.6 0.2 2.8 3 0 0 3 3 3 0 RsgA GTPase Ribosomal_S7 PF00177.21 gi|452210790|ref|YP_007490904.1| - 2.1e-36 124.8 4.3 2.5e-36 124.6 4.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e DUF2420 PF10336.9 gi|452210790|ref|YP_007490904.1| - 0.018 15.1 0.0 0.029 14.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2420) Ribosom_S12_S23 PF00164.25 gi|452210791|ref|YP_007490905.1| - 1.4e-46 156.8 0.3 1.6e-46 156.6 0.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S12/S23 KH_2 PF07650.17 gi|452210792|ref|YP_007490906.1| - 7e-20 70.6 2.3 1.3e-13 50.6 0.1 2.1 1 1 1 2 2 2 2 KH domain KH_5 PF13184.6 gi|452210792|ref|YP_007490906.1| - 4.8e-17 61.8 0.6 8.8e-15 54.6 0.1 2.2 2 0 0 2 2 2 2 NusA-like KH domain KH_1 PF00013.29 gi|452210792|ref|YP_007490906.1| - 7.5e-07 28.9 0.3 0.05 13.4 0.0 2.4 2 0 0 2 2 2 2 KH domain KH_4 PF13083.6 gi|452210792|ref|YP_007490906.1| - 2.1e-06 27.5 1.6 0.05 13.5 0.0 2.7 2 1 1 3 3 3 2 KH domain Ribosomal_L7Ae PF01248.26 gi|452210793|ref|YP_007490907.1| - 5.2e-17 61.4 0.5 6.2e-17 61.1 0.5 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BRCT_3 PF18428.1 gi|452210793|ref|YP_007490907.1| - 0.019 15.0 0.1 0.025 14.7 0.1 1.2 1 0 0 1 1 1 0 BRCA1 C Terminus (BRCT) domain RNA_pol_Rpb1_5 PF04998.17 gi|452210795|ref|YP_007490909.1| - 4.3e-54 183.7 1.2 7.8e-54 182.9 1.2 1.4 1 1 0 1 1 1 1 RNA polymerase Rpb1, domain 5 DUF1947 PF09183.10 gi|452210795|ref|YP_007490909.1| - 0.12 12.7 1.7 0.33 11.3 0.1 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF1947) RNA_pol_Rpb1_1 PF04997.12 gi|452210796|ref|YP_007490910.1| - 2.3e-107 358.9 0.0 4.5e-107 358.0 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.20 gi|452210796|ref|YP_007490910.1| - 7.2e-72 241.0 0.1 1.2e-71 240.3 0.1 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_4 PF05000.17 gi|452210796|ref|YP_007490910.1| - 1.2e-30 105.6 0.0 2.9e-30 104.4 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 RNA_pol_Rpb1_3 PF04983.18 gi|452210796|ref|YP_007490910.1| - 6.1e-29 101.0 0.0 1.4e-28 99.8 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_5 PF04998.17 gi|452210796|ref|YP_007490910.1| - 2.8e-28 99.1 0.0 5.1e-28 98.3 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 Fer4_10 PF13237.6 gi|452210796|ref|YP_007490910.1| - 4 7.6 10.1 0.16 12.1 0.2 3.0 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|452210796|ref|YP_007490910.1| - 6.7 7.3 11.9 0.31 11.6 0.3 3.1 3 0 0 3 3 3 0 4Fe-4S dicluster domain RNA_pol_Rpb2_6 PF00562.28 gi|452210797|ref|YP_007490911.1| - 4.5e-125 417.8 0.0 5.8e-125 417.4 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_7 PF04560.20 gi|452210797|ref|YP_007490911.1| - 2.9e-28 98.1 0.1 8.1e-28 96.7 0.1 1.8 2 0 0 2 2 2 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_4 PF04566.13 gi|452210797|ref|YP_007490911.1| - 2.5e-23 82.1 0.3 4.8e-23 81.2 0.3 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 4 RNA_pol_Rpb2_5 PF04567.17 gi|452210797|ref|YP_007490911.1| - 1.1e-12 48.3 2.3 3.1e-12 46.9 2.3 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 5 DUF1451 PF07295.11 gi|452210797|ref|YP_007490911.1| - 0.046 13.8 0.4 0.093 12.8 0.4 1.4 1 0 0 1 1 1 0 Zinc-ribbon containing domain YflT PF11181.8 gi|452210797|ref|YP_007490911.1| - 0.053 14.0 0.5 0.71 10.4 0.0 2.5 3 0 0 3 3 3 0 Heat induced stress protein YflT RNA_pol_Rpb2_45 PF10385.9 gi|452210797|ref|YP_007490911.1| - 0.07 13.4 0.5 0.22 11.8 0.2 2.0 2 0 0 2 2 2 0 RNA polymerase beta subunit external 1 domain Nudix_N_2 PF14803.6 gi|452210797|ref|YP_007490911.1| - 0.073 13.0 0.5 17 5.5 0.0 2.6 2 0 0 2 2 2 0 Nudix N-terminal zinc_ribbon_2 PF13240.6 gi|452210797|ref|YP_007490911.1| - 0.17 11.7 1.3 3.7 7.4 0.2 2.3 2 0 0 2 2 2 0 zinc-ribbon domain SAP PF02037.27 gi|452210797|ref|YP_007490911.1| - 0.24 11.2 0.5 0.67 9.8 0.0 2.0 2 0 0 2 2 2 0 SAP domain RNA_pol_Rpb2_1 PF04563.15 gi|452210798|ref|YP_007490912.1| - 2.6e-51 174.1 0.2 3.5e-51 173.6 0.2 1.2 1 0 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_2 PF04561.14 gi|452210798|ref|YP_007490912.1| - 1.1e-29 103.4 0.3 1.8e-29 102.8 0.3 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb2_3 PF04565.16 gi|452210798|ref|YP_007490912.1| - 6.6e-25 87.1 0.0 1.1e-24 86.3 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb5_C PF01191.19 gi|452210799|ref|YP_007490913.1| - 2.3e-29 101.1 0.1 2.8e-29 100.8 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain HisKA_2 PF07568.12 gi|452210800|ref|YP_007490914.1| - 5e-08 32.9 0.1 1.3e-07 31.6 0.0 1.7 2 0 0 2 2 2 1 Histidine kinase HATPase_c PF02518.26 gi|452210800|ref|YP_007490914.1| - 1.9e-06 28.3 0.0 8.2e-06 26.3 0.0 2.0 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|452210800|ref|YP_007490914.1| - 2.8e-05 24.1 0.0 4.8e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_3 PF08447.12 gi|452210803|ref|YP_007490917.1| - 1e-52 176.4 0.6 6e-17 61.7 0.1 6.1 6 0 0 6 6 6 4 PAS fold MEDS PF14417.6 gi|452210803|ref|YP_007490917.1| - 2.1e-43 148.0 0.0 5.4e-43 146.6 0.0 1.8 1 0 0 1 1 1 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain PAS_4 PF08448.10 gi|452210803|ref|YP_007490917.1| - 9.7e-42 141.7 0.0 7.9e-16 58.3 0.0 4.7 4 0 0 4 4 4 4 PAS fold PAS_9 PF13426.7 gi|452210803|ref|YP_007490917.1| - 1.9e-40 137.3 0.3 7e-15 55.2 0.0 5.8 5 0 0 5 5 5 5 PAS domain PAS PF00989.25 gi|452210803|ref|YP_007490917.1| - 3.1e-37 127.0 0.1 3.7e-15 55.9 0.0 5.6 5 0 0 5 5 5 4 PAS fold HisKA_2 PF07568.12 gi|452210803|ref|YP_007490917.1| - 6.4e-29 99.9 1.6 2.8e-28 97.8 1.6 2.2 1 0 0 1 1 1 1 Histidine kinase PAS_8 PF13188.7 gi|452210803|ref|YP_007490917.1| - 4.4e-19 68.1 0.0 4.4e-09 36.2 0.0 4.1 4 0 0 4 4 4 2 PAS domain HATPase_c PF02518.26 gi|452210803|ref|YP_007490917.1| - 4.8e-07 30.3 0.2 1.5e-06 28.7 0.2 1.9 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_10 PF13596.6 gi|452210803|ref|YP_007490917.1| - 1.4e-06 28.8 0.0 1 10.0 0.0 5.1 5 0 0 5 5 5 1 PAS domain PAS_7 PF12860.7 gi|452210803|ref|YP_007490917.1| - 7.8e-05 22.8 0.1 2.9 8.1 0.0 5.1 5 1 0 5 5 5 1 PAS fold PAS_11 PF14598.6 gi|452210803|ref|YP_007490917.1| - 0.00023 21.3 0.2 0.69 10.1 0.0 4.1 5 0 0 5 5 4 1 PAS domain HWE_HK PF07536.14 gi|452210803|ref|YP_007490917.1| - 0.012 16.3 0.1 0.041 14.6 0.1 2.0 1 0 0 1 1 1 0 HWE histidine kinase Osmo_CC PF08946.10 gi|452210803|ref|YP_007490917.1| - 0.13 12.6 1.8 14 6.1 0.4 3.1 2 0 0 2 2 2 0 Osmosensory transporter coiled coil PAS_3 PF08447.12 gi|452210804|ref|YP_007490918.1| - 8.1e-69 228.0 0.7 1.5e-18 66.9 0.1 7.1 7 0 0 7 7 6 4 PAS fold PAS_9 PF13426.7 gi|452210804|ref|YP_007490918.1| - 1.1e-36 125.2 7.6 2.5e-11 43.7 0.0 7.7 7 0 0 7 7 7 5 PAS domain PAS_4 PF08448.10 gi|452210804|ref|YP_007490918.1| - 1.2e-34 118.9 0.0 3.1e-07 30.6 0.0 6.9 6 1 0 6 6 6 6 PAS fold MEDS PF14417.6 gi|452210804|ref|YP_007490918.1| - 8.1e-33 113.5 0.2 2.4e-32 112.0 0.0 2.0 2 0 0 2 2 2 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain HisKA_2 PF07568.12 gi|452210804|ref|YP_007490918.1| - 6.7e-30 103.0 1.7 2.8e-29 101.0 0.8 2.7 2 0 0 2 2 2 1 Histidine kinase PAS PF00989.25 gi|452210804|ref|YP_007490918.1| - 1.7e-25 89.2 0.2 5e-06 26.5 0.0 6.7 6 0 0 6 6 6 4 PAS fold PAS_8 PF13188.7 gi|452210804|ref|YP_007490918.1| - 3.4e-13 49.3 0.0 0.00013 21.9 0.0 5.6 6 0 0 6 6 6 2 PAS domain HATPase_c PF02518.26 gi|452210804|ref|YP_007490918.1| - 3.8e-09 37.1 0.2 1.9e-08 34.8 0.0 2.3 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HWE_HK PF07536.14 gi|452210804|ref|YP_007490918.1| - 0.019 15.7 0.1 0.019 15.7 0.1 2.7 3 0 0 3 3 3 0 HWE histidine kinase LeuA_dimer PF08502.10 gi|452210804|ref|YP_007490918.1| - 0.02 14.8 0.1 0.18 11.7 0.0 2.3 2 0 0 2 2 2 0 LeuA allosteric (dimerisation) domain HAS-barrel PF09378.10 gi|452210804|ref|YP_007490918.1| - 0.028 14.6 1.3 0.83 9.9 0.1 3.1 2 0 0 2 2 2 0 HAS barrel domain DUF5344 PF17279.2 gi|452210804|ref|YP_007490918.1| - 0.093 13.3 7.7 0.99 10.0 0.1 4.0 3 0 0 3 3 3 0 Family of unknown function (DUF5344) AdoHcyase PF05221.17 gi|452210807|ref|YP_007490921.1| - 1.2e-57 195.4 0.0 4.6e-29 101.5 0.0 2.0 1 1 1 2 2 2 2 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.21 gi|452210807|ref|YP_007490921.1| - 4.4e-51 173.2 1.3 8.5e-51 172.2 1.3 1.5 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|452210807|ref|YP_007490921.1| - 1.8e-09 37.2 0.2 3.2e-09 36.4 0.2 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 gi|452210807|ref|YP_007490921.1| - 8e-06 25.5 0.1 1.5e-05 24.6 0.1 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_Gly3P_dh_C PF07479.14 gi|452210807|ref|YP_007490921.1| - 0.02 15.1 1.1 0.033 14.5 0.5 1.7 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Amidohydro_1 PF01979.20 gi|452210808|ref|YP_007490922.1| - 4e-76 256.6 0.7 4.9e-76 256.3 0.7 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|452210808|ref|YP_007490922.1| - 7.1e-25 88.4 0.4 3.4e-17 63.1 0.0 2.3 2 0 0 2 2 2 2 Amidohydrolase family A_deaminase PF00962.22 gi|452210808|ref|YP_007490922.1| - 9.4e-06 25.2 0.0 1.6e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 Adenosine/AMP deaminase HD PF01966.22 gi|452210809|ref|YP_007490923.1| - 1.8e-14 54.0 0.6 2.9e-14 53.3 0.6 1.3 1 0 0 1 1 1 1 HD domain PPS_PS PF02006.16 gi|452210810|ref|YP_007490924.1| - 4.6e-76 254.3 2.5 5.7e-76 254.0 2.5 1.1 1 0 0 1 1 1 1 Phosphopantothenate/pantothenate synthetase TMF_TATA_bd PF12325.8 gi|452210810|ref|YP_007490924.1| - 0.046 14.0 1.0 0.1 12.8 1.0 1.6 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding GHMP_kinases_N PF00288.26 gi|452210812|ref|YP_007490926.1| - 3.5e-09 36.8 3.0 3.5e-09 36.8 3.0 2.1 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|452210812|ref|YP_007490926.1| - 0.00013 22.2 0.1 0.0022 18.3 0.0 2.4 2 0 0 2 2 2 1 GHMP kinases C terminal DUF4982 PF16355.5 gi|452210812|ref|YP_007490926.1| - 0.1 12.6 0.2 0.21 11.6 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4982) DFP PF04127.15 gi|452210813|ref|YP_007490927.1| - 2.6e-47 161.1 0.1 1.9e-46 158.2 0.0 2.0 2 0 0 2 2 2 1 DNA / pantothenate metabolism flavoprotein Flavoprotein PF02441.19 gi|452210813|ref|YP_007490927.1| - 2.1e-38 131.6 0.1 3.5e-38 130.8 0.1 1.4 1 0 0 1 1 1 1 Flavoprotein NAD_binding_10 PF13460.6 gi|452210813|ref|YP_007490927.1| - 0.0067 16.3 0.2 0.017 15.0 0.0 1.7 2 0 0 2 2 2 1 NAD(P)H-binding acVLRF1 PF18859.1 gi|452210814|ref|YP_007490928.1| - 5.9e-18 65.4 0.2 1.6e-17 64.0 0.0 1.8 2 0 0 2 2 2 1 Actinobacteria/chloroflexi VLRF1 release factor baeRF_family10 PF18854.1 gi|452210814|ref|YP_007490928.1| - 5.8e-11 42.8 1.5 8.6e-11 42.2 0.0 1.9 2 0 0 2 2 2 1 Bacterial archaeo-eukaryotic release factor family 10 eRF1_2 PF03464.15 gi|452210814|ref|YP_007490928.1| - 2.2e-09 37.7 0.1 5.8e-09 36.4 0.0 1.8 2 0 0 2 2 2 1 eRF1 domain 2 baeRF_family2 PF18844.1 gi|452210814|ref|YP_007490928.1| - 2.1e-05 24.6 2.5 0.00041 20.4 0.0 2.4 2 0 0 2 2 2 1 Bacterial archaeo-eukaryotic release factor family 2 DUF4472 PF14739.6 gi|452210814|ref|YP_007490928.1| - 0.015 16.0 7.9 0.034 14.9 7.9 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4472) DUF3584 PF12128.8 gi|452210814|ref|YP_007490928.1| - 0.038 11.5 5.5 0.055 11.0 5.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) zf-ZPR1 PF03367.13 gi|452210814|ref|YP_007490928.1| - 0.44 10.4 1.9 21 4.9 0.9 2.2 2 0 0 2 2 2 0 ZPR1 zinc-finger domain DUF4200 PF13863.6 gi|452210814|ref|YP_007490928.1| - 0.6 10.5 9.4 0.062 13.7 4.8 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4200) DUF3552 PF12072.8 gi|452210814|ref|YP_007490928.1| - 1.2 8.5 10.4 2.2 7.6 10.4 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) Pup PF05639.11 gi|452210814|ref|YP_007490928.1| - 3.4 8.7 7.8 0.34 11.8 1.2 2.6 2 1 0 2 2 2 0 Pup-like protein DUF1275 PF06912.11 gi|452210815|ref|YP_007490929.1| - 1.2e-46 159.0 18.3 1.5e-46 158.8 18.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1275) SLATT_4 PF18186.1 gi|452210815|ref|YP_007490929.1| - 0.77 9.4 3.6 0.56 9.8 2.0 1.6 1 1 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 4 RseC_MucC PF04246.12 gi|452210815|ref|YP_007490929.1| - 0.83 9.6 8.1 0.076 13.0 1.5 2.3 2 1 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC NosD PF05048.13 gi|452210816|ref|YP_007490930.1| - 3.2e-29 101.9 8.1 4.3e-29 101.5 6.9 1.8 2 0 0 2 2 2 1 Periplasmic copper-binding protein (NosD) PKD PF00801.20 gi|452210816|ref|YP_007490930.1| - 3.1e-19 68.6 10.8 7.6e-12 44.9 3.3 2.7 2 0 0 2 2 2 2 PKD domain PGF-CTERM PF18204.1 gi|452210816|ref|YP_007490930.1| - 2.8e-05 23.9 4.7 2.8e-05 23.9 4.7 1.9 2 0 0 2 2 2 1 PGF-CTERM motif Dockerin_1 PF00404.18 gi|452210816|ref|YP_007490930.1| - 0.11 12.7 0.5 2.6 8.3 0.0 2.3 2 0 0 2 2 2 0 Dockerin type I domain T2SSE PF00437.20 gi|452210817|ref|YP_007490931.1| - 2.9e-31 108.5 0.0 8.1e-31 107.1 0.0 1.7 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_7 PF12775.7 gi|452210817|ref|YP_007490931.1| - 0.0014 18.1 0.0 0.0028 17.2 0.0 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_16 PF13191.6 gi|452210817|ref|YP_007490931.1| - 0.0085 16.5 0.0 0.025 14.9 0.0 1.8 1 0 0 1 1 1 1 AAA ATPase domain Zeta_toxin PF06414.12 gi|452210817|ref|YP_007490931.1| - 0.044 13.1 0.0 0.11 11.7 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin DEAD PF00270.29 gi|452210817|ref|YP_007490931.1| - 0.045 13.5 0.0 0.086 12.6 0.0 1.4 1 0 0 1 1 1 0 DEAD/DEAH box helicase ABC_tran PF00005.27 gi|452210817|ref|YP_007490931.1| - 0.059 13.9 0.0 0.18 12.3 0.0 1.8 1 0 0 1 1 1 0 ABC transporter AAA_22 PF13401.6 gi|452210817|ref|YP_007490931.1| - 0.061 13.6 0.1 0.31 11.3 0.0 2.3 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 gi|452210817|ref|YP_007490931.1| - 0.075 12.6 0.0 0.15 11.6 0.0 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain DUF2117 PF09890.9 gi|452210818|ref|YP_007490932.1| - 3.3e-71 239.1 0.0 4.3e-71 238.7 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2117) NAD_kinase PF01513.21 gi|452210818|ref|YP_007490932.1| - 0.014 14.7 0.1 0.023 13.9 0.1 1.3 1 0 0 1 1 1 0 ATP-NAD kinase PA PF02225.22 gi|452210818|ref|YP_007490932.1| - 0.1 12.6 0.0 0.29 11.2 0.0 1.8 1 0 0 1 1 1 0 PA domain Prismane PF03063.20 gi|452210819|ref|YP_007490933.1| - 1.1e-123 413.7 0.0 1.3e-123 413.4 0.0 1.0 1 0 0 1 1 1 1 Prismane/CO dehydrogenase family Lar_N PF09861.9 gi|452210821|ref|YP_007490935.1| - 9.1e-49 165.4 1.2 9.9e-49 165.3 0.1 1.6 2 0 0 2 2 2 1 Lactate racemase N-terminal domain DUF362 PF04015.12 gi|452210821|ref|YP_007490935.1| - 0.0048 17.2 0.0 0.012 15.9 0.0 1.6 1 1 0 2 2 2 1 Domain of unknown function (DUF362) Methyltransf_2 PF00891.18 gi|452210821|ref|YP_007490935.1| - 0.06 12.6 0.0 0.13 11.5 0.0 1.5 1 0 0 1 1 1 0 O-methyltransferase domain PABP PF00658.18 gi|452210821|ref|YP_007490935.1| - 0.12 12.5 0.0 0.29 11.3 0.0 1.6 1 0 0 1 1 1 0 Poly-adenylate binding protein, unique domain SSF PF00474.17 gi|452210822|ref|YP_007490936.1| - 2e-56 191.6 42.3 3e-56 191.0 42.3 1.3 1 0 0 1 1 1 1 Sodium:solute symporter family YoqO PF14037.6 gi|452210822|ref|YP_007490936.1| - 0.0087 16.6 1.4 0.0087 16.6 1.4 3.6 5 0 0 5 5 5 1 YoqO-like protein DUF4516 PF14990.6 gi|452210823|ref|YP_007490937.1| - 0.49 10.2 1.7 0.73 9.6 1.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4516) Asparaginase PF00710.20 gi|452210824|ref|YP_007490938.1| - 6.3e-60 202.0 1.5 1.1e-59 201.2 0.7 1.7 2 0 0 2 2 2 1 Asparaginase, N-terminal Asparaginase_C PF17763.1 gi|452210824|ref|YP_007490938.1| - 1.3e-30 105.9 0.1 2.7e-29 101.7 0.0 2.3 2 0 0 2 2 2 1 Glutaminase/Asparaginase C-terminal domain GatD_N PF18195.1 gi|452210824|ref|YP_007490938.1| - 4.1e-17 61.2 0.3 8.1e-17 60.3 0.3 1.5 1 0 0 1 1 1 1 GatD N-terminal domain zf-primase PF09329.11 gi|452210824|ref|YP_007490938.1| - 0.12 12.2 0.1 0.25 11.2 0.1 1.4 1 0 0 1 1 1 0 Primase zinc finger Lyase_1 PF00206.20 gi|452210825|ref|YP_007490939.1| - 1e-62 212.4 0.0 1.5e-62 211.8 0.0 1.3 1 0 0 1 1 1 1 Lyase ASL_C2 PF14698.6 gi|452210825|ref|YP_007490939.1| - 5.3e-15 55.9 0.2 2.3e-14 53.9 0.0 2.3 2 0 0 2 2 2 1 Argininosuccinate lyase C-terminal E2F_TDP PF02319.20 gi|452210826|ref|YP_007490940.1| - 0.021 14.9 0.0 0.023 14.8 0.0 1.1 1 0 0 1 1 1 0 E2F/DP family winged-helix DNA-binding domain Methyltransf_11 PF08241.12 gi|452210827|ref|YP_007490941.1| - 2.1e-25 89.2 0.0 2.9e-25 88.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|452210827|ref|YP_007490941.1| - 9.4e-24 84.1 0.0 1.1e-23 83.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|452210827|ref|YP_007490941.1| - 4.9e-22 78.4 0.0 7.3e-22 77.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|452210827|ref|YP_007490941.1| - 9.2e-19 67.7 0.0 1.2e-18 67.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|452210827|ref|YP_007490941.1| - 4.5e-18 65.4 0.0 5.8e-18 65.1 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|452210827|ref|YP_007490941.1| - 1.6e-17 64.0 0.0 2.5e-17 63.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|452210827|ref|YP_007490941.1| - 3.5e-07 30.0 0.0 5e-07 29.5 0.0 1.1 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW TehB PF03848.14 gi|452210827|ref|YP_007490941.1| - 3.2e-06 26.7 0.0 4.9e-06 26.1 0.0 1.3 1 1 0 1 1 1 1 Tellurite resistance protein TehB NodS PF05401.11 gi|452210827|ref|YP_007490941.1| - 5.7e-05 22.8 0.0 8.1e-05 22.3 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) PCMT PF01135.19 gi|452210827|ref|YP_007490941.1| - 0.0046 16.7 0.0 0.0068 16.2 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_9 PF08003.11 gi|452210827|ref|YP_007490941.1| - 0.0048 15.9 0.0 0.0063 15.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Methyltransf_4 PF02390.17 gi|452210827|ref|YP_007490941.1| - 0.0068 15.9 0.0 0.015 14.8 0.0 1.5 1 1 0 1 1 1 1 Putative methyltransferase Methyltransf_17 PF12692.7 gi|452210827|ref|YP_007490941.1| - 0.13 12.3 0.0 0.22 11.5 0.0 1.4 1 0 0 1 1 1 0 S-adenosyl-L-methionine methyltransferase Methyltransf_29 PF03141.16 gi|452210827|ref|YP_007490941.1| - 0.18 10.4 0.0 0.22 10.0 0.0 1.1 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Gate PF07670.14 gi|452210828|ref|YP_007490942.1| - 3.1e-12 46.8 12.8 2.9e-06 27.5 0.6 2.7 2 1 1 3 3 3 2 Nucleoside recognition MogR_DNAbind PF12181.8 gi|452210828|ref|YP_007490942.1| - 0.15 12.0 0.0 0.27 11.1 0.0 1.4 1 0 0 1 1 1 0 DNA binding domain of the motility gene repressor (MogR) ABC1 PF03109.16 gi|452210829|ref|YP_007490943.1| - 1.6e-26 92.8 0.0 4.1e-26 91.5 0.0 1.7 1 0 0 1 1 1 1 ABC1 family RIO1 PF01163.22 gi|452210829|ref|YP_007490943.1| - 9.9e-08 31.8 0.1 2.6e-07 30.4 0.1 1.7 1 0 0 1 1 1 1 RIO1 family Pkinase PF00069.25 gi|452210829|ref|YP_007490943.1| - 4.4e-05 23.0 0.1 0.0013 18.2 0.1 2.3 2 0 0 2 2 2 1 Protein kinase domain WaaY PF06176.11 gi|452210829|ref|YP_007490943.1| - 0.0017 18.0 0.1 0.0036 17.0 0.1 1.5 1 0 0 1 1 1 1 Lipopolysaccharide core biosynthesis protein (WaaY) APH PF01636.23 gi|452210829|ref|YP_007490943.1| - 0.012 15.6 0.3 0.028 14.3 0.3 1.6 1 0 0 1 1 1 0 Phosphotransferase enzyme family HMA PF00403.26 gi|452210830|ref|YP_007490944.1| - 5.6e-06 26.7 0.0 5.8e-06 26.7 0.0 1.0 1 0 0 1 1 1 1 Heavy-metal-associated domain DUF4405 PF14358.6 gi|452210832|ref|YP_007490946.1| - 0.0087 16.6 8.6 0.033 14.7 8.6 1.9 1 1 0 1 1 1 1 Domain of unknown function (DUF4405) HupF_HypC PF01455.18 gi|452210833|ref|YP_007490947.1| - 7.9e-14 51.6 0.1 1.1e-13 51.2 0.1 1.1 1 0 0 1 1 1 1 HupF/HypC family HypD PF01924.16 gi|452210834|ref|YP_007490948.1| - 2.3e-136 454.5 0.0 2.7e-136 454.3 0.0 1.0 1 0 0 1 1 1 1 Hydrogenase formation hypA family HypA PF01155.19 gi|452210835|ref|YP_007490949.1| - 2.7e-28 98.2 2.2 3.2e-28 98.0 2.2 1.0 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA RbpA PF13397.6 gi|452210835|ref|YP_007490949.1| - 0.096 13.3 0.1 3.5 8.3 0.0 2.2 1 1 1 2 2 2 0 RNA polymerase-binding protein cobW PF02492.19 gi|452210836|ref|YP_007490950.1| - 3e-13 49.8 0.5 3.4e-13 49.5 0.5 1.0 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 gi|452210836|ref|YP_007490950.1| - 0.0078 15.2 0.4 0.0088 15.0 0.4 1.1 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB Proton_antipo_M PF00361.20 gi|452210837|ref|YP_007490951.1| - 1.6e-49 168.7 26.0 1.6e-49 168.7 26.0 2.7 2 1 0 3 3 3 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|452210837|ref|YP_007490951.1| - 2.1e-08 34.1 0.6 2.1e-08 34.1 0.6 3.0 2 1 1 3 3 3 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FtsH_ext PF06480.15 gi|452210837|ref|YP_007490951.1| - 8.4 6.8 7.5 6.6 7.1 0.5 3.9 3 1 0 3 3 3 0 FtsH Extracellular NADHdh PF00146.21 gi|452210838|ref|YP_007490952.1| - 2.5e-44 151.8 23.6 3.2e-44 151.4 23.6 1.1 1 0 0 1 1 1 1 NADH dehydrogenase Oxidored_q6 PF01058.22 gi|452210839|ref|YP_007490953.1| - 1.9e-19 69.8 2.3 2.3e-19 69.5 2.3 1.1 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Complex1_30kDa PF00329.19 gi|452210840|ref|YP_007490954.1| - 0.053 14.1 0.0 0.057 14.0 0.0 1.1 1 0 0 1 1 1 0 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Complex1_49kDa PF00346.19 gi|452210841|ref|YP_007490955.1| - 3e-63 213.5 0.2 1.8e-46 158.5 0.2 2.1 1 1 1 2 2 2 2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NiFeSe_Hases PF00374.19 gi|452210841|ref|YP_007490955.1| - 5.2e-16 58.6 3.0 2.8e-15 56.2 0.0 2.8 3 0 0 3 3 3 1 Nickel-dependent hydrogenase T4_Rnl2_C PF18043.1 gi|452210841|ref|YP_007490955.1| - 0.077 13.1 0.1 0.15 12.3 0.1 1.4 1 0 0 1 1 1 0 T4 RNA ligase 2 C-terminal Fer4_7 PF12838.7 gi|452210842|ref|YP_007490956.1| - 1.6e-12 47.8 35.1 2.4e-07 31.2 13.9 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|452210842|ref|YP_007490956.1| - 1.6e-11 44.1 22.9 4.9e-09 36.2 11.9 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|452210842|ref|YP_007490956.1| - 4e-11 42.2 15.6 1.1e-07 31.4 4.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|452210842|ref|YP_007490956.1| - 2.2e-08 34.1 13.5 3.3e-08 33.5 13.5 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|452210842|ref|YP_007490956.1| - 6.3e-07 29.2 16.7 0.0001 22.2 3.6 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|452210842|ref|YP_007490956.1| - 7.6e-07 28.9 11.2 0.00014 21.7 2.2 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|452210842|ref|YP_007490956.1| - 9.8e-07 28.8 13.5 1.5e-06 28.2 13.5 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|452210842|ref|YP_007490956.1| - 1.9e-06 28.3 9.9 0.0013 19.3 0.5 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452210842|ref|YP_007490956.1| - 8.4e-06 26.6 11.8 0.0045 17.9 1.4 2.2 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.6 gi|452210842|ref|YP_007490956.1| - 0.00038 20.9 15.3 0.092 13.2 15.3 2.2 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|452210842|ref|YP_007490956.1| - 0.0026 18.6 20.5 0.04 14.8 3.7 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain ETF_QO PF05187.13 gi|452210842|ref|YP_007490956.1| - 0.0029 17.7 0.3 0.0029 17.7 0.3 2.1 1 1 1 2 2 2 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_22 PF17179.4 gi|452210842|ref|YP_007490956.1| - 0.0034 18.2 5.5 1.4 9.8 2.2 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|452210842|ref|YP_007490956.1| - 0.0073 16.7 13.2 0.13 12.9 1.8 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|452210842|ref|YP_007490956.1| - 0.08 13.5 11.0 1.2 9.7 2.1 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_18 PF13746.6 gi|452210842|ref|YP_007490956.1| - 0.62 10.3 10.9 1.5 9.0 10.9 1.6 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|452210842|ref|YP_007490956.1| - 0.92 10.3 14.1 0.4 11.5 1.7 2.7 2 2 0 2 2 2 0 4Fe-4S single cluster domain HMA PF00403.26 gi|452210843|ref|YP_007490957.1| - 3e-13 50.0 4.0 3.2e-13 49.9 4.0 1.0 1 0 0 1 1 1 1 Heavy-metal-associated domain DUF2674 PF10879.8 gi|452210843|ref|YP_007490957.1| - 0.013 15.0 0.2 0.021 14.4 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2674) UPF0270 PF06794.12 gi|452210843|ref|YP_007490957.1| - 0.023 14.8 0.4 0.026 14.6 0.4 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0270) Spore_YhcN_YlaJ PF09580.10 gi|452210843|ref|YP_007490957.1| - 0.13 12.3 3.2 0.15 12.1 3.2 1.0 1 0 0 1 1 1 0 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) HMA PF00403.26 gi|452210844|ref|YP_007490958.1| - 2.4e-07 31.1 0.4 2.7e-07 30.9 0.4 1.0 1 0 0 1 1 1 1 Heavy-metal-associated domain QueT PF06177.11 gi|452210845|ref|YP_007490959.1| - 0.005 17.2 1.1 0.0057 17.0 1.1 1.0 1 0 0 1 1 1 1 QueT transporter OAD_gamma PF04277.13 gi|452210845|ref|YP_007490959.1| - 0.035 14.7 0.0 0.042 14.4 0.0 1.2 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain DUF2196 PF09962.9 gi|452210846|ref|YP_007490960.1| - 1.1e-29 102.2 4.7 1.2e-29 102.0 4.7 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2196) Yopt PF09467.10 gi|452210846|ref|YP_007490960.1| - 0.18 11.9 0.0 0.19 11.8 0.0 1.2 1 0 0 1 1 1 0 Hypothetical protein Yopt MFS_1 PF07690.16 gi|452210847|ref|YP_007490961.1| - 6.9e-53 179.8 45.7 3.4e-51 174.2 37.0 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|452210847|ref|YP_007490961.1| - 0.069 12.0 32.6 0.44 9.3 32.6 2.6 1 1 0 1 1 1 0 Sugar (and other) transporter MFS_2 PF13347.6 gi|452210847|ref|YP_007490961.1| - 0.48 8.9 39.5 0.38 9.2 15.8 3.0 1 1 0 2 2 2 0 MFS/sugar transport protein Methyltransf_11 PF08241.12 gi|452210849|ref|YP_007490963.1| - 2.5e-23 82.5 0.0 3.6e-23 82.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|452210849|ref|YP_007490963.1| - 1.5e-21 76.9 0.0 2.6e-21 76.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|452210849|ref|YP_007490963.1| - 6.2e-20 71.5 0.0 8.8e-20 71.0 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|452210849|ref|YP_007490963.1| - 9.2e-19 67.9 0.0 1.1e-18 67.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|452210849|ref|YP_007490963.1| - 7.8e-15 54.8 0.0 9.4e-15 54.6 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|452210849|ref|YP_007490963.1| - 3.1e-12 47.1 0.0 4.5e-12 46.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 gi|452210849|ref|YP_007490963.1| - 6.9e-09 35.4 0.0 1.1e-08 34.8 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB MTS PF05175.14 gi|452210849|ref|YP_007490963.1| - 9.6e-08 31.8 0.0 1.4e-07 31.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain MetW PF07021.12 gi|452210849|ref|YP_007490963.1| - 1.2e-06 28.3 0.0 1.8e-06 27.7 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW PrmA PF06325.13 gi|452210849|ref|YP_007490963.1| - 1.4e-06 28.0 0.0 1.7e-06 27.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) N6_N4_Mtase PF01555.18 gi|452210849|ref|YP_007490963.1| - 1.1e-05 25.2 0.1 0.00028 20.7 0.0 2.1 2 0 0 2 2 2 1 DNA methylase TPMT PF05724.11 gi|452210849|ref|YP_007490963.1| - 1.8e-05 24.5 0.0 2.8e-05 23.9 0.0 1.2 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_32 PF13679.6 gi|452210849|ref|YP_007490963.1| - 0.00011 22.2 0.0 0.00014 21.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|452210849|ref|YP_007490963.1| - 0.0014 18.0 0.0 0.0021 17.4 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_8 PF05148.15 gi|452210849|ref|YP_007490963.1| - 0.0045 16.9 0.0 1.1 9.0 0.0 2.2 2 0 0 2 2 2 1 Hypothetical methyltransferase NodS PF05401.11 gi|452210849|ref|YP_007490963.1| - 0.0055 16.3 0.0 0.0084 15.7 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_18 PF12847.7 gi|452210849|ref|YP_007490963.1| - 0.0063 16.5 0.0 0.0098 15.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|452210849|ref|YP_007490963.1| - 0.024 14.2 0.0 0.037 13.6 0.0 1.3 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Cons_hypoth95 PF03602.15 gi|452210849|ref|YP_007490963.1| - 0.03 14.0 0.0 0.044 13.4 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical protein 95 UPF0020 PF01170.18 gi|452210849|ref|YP_007490963.1| - 0.041 13.6 0.1 0.35 10.5 0.1 2.0 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 CheR PF01739.18 gi|452210849|ref|YP_007490963.1| - 0.061 12.8 0.1 2.5 7.5 0.0 2.4 1 1 1 2 2 2 0 CheR methyltransferase, SAM binding domain Methyltransf_4 PF02390.17 gi|452210849|ref|YP_007490963.1| - 0.068 12.6 0.0 0.2 11.1 0.0 1.8 1 1 0 1 1 1 0 Putative methyltransferase MethyltransfD12 PF02086.15 gi|452210849|ref|YP_007490963.1| - 0.13 11.9 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 D12 class N6 adenine-specific DNA methyltransferase RrnaAD PF00398.20 gi|452210849|ref|YP_007490963.1| - 0.14 11.2 0.0 0.22 10.6 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase DOT1 PF08123.13 gi|452210849|ref|YP_007490963.1| - 0.15 11.6 0.0 0.38 10.2 0.0 1.7 1 1 1 2 2 2 0 Histone methylation protein DOT1 AdoMet_MTase PF07757.13 gi|452210849|ref|YP_007490963.1| - 0.16 12.3 0.0 0.35 11.2 0.0 1.5 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase N2227 PF07942.12 gi|452210849|ref|YP_007490963.1| - 0.16 11.1 0.0 0.3 10.2 0.0 1.4 1 0 0 1 1 1 0 N2227-like protein Multi_Drug_Res PF00893.19 gi|452210850|ref|YP_007490964.1| - 4.4e-29 101.0 7.7 5.7e-29 100.6 7.7 1.1 1 0 0 1 1 1 1 Small Multidrug Resistance protein TMEM144 PF07857.12 gi|452210850|ref|YP_007490964.1| - 0.041 12.9 8.6 0.071 12.1 8.6 1.5 1 1 0 1 1 1 0 Transmembrane family, TMEM144 of transporters DUF2678 PF10856.8 gi|452210850|ref|YP_007490964.1| - 3.6 7.5 7.6 0.53 10.2 3.7 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF2678) DUF3464 PF11947.8 gi|452210850|ref|YP_007490964.1| - 8.5 6.1 8.6 23 4.7 2.6 2.1 1 1 1 2 2 2 0 Photosynthesis affected mutant 68 zinc_ribbon_6 PF14599.6 gi|452210852|ref|YP_007490966.1| - 0.02 14.9 1.8 0.31 11.1 1.7 2.1 1 1 1 2 2 2 0 Zinc-ribbon zinc_ribbon_6 PF14599.6 gi|452210853|ref|YP_007490967.1| - 0.0038 17.2 0.6 0.0063 16.5 0.6 1.4 1 1 0 1 1 1 1 Zinc-ribbon eIF-1a PF01176.19 gi|452210854|ref|YP_007490968.1| - 2.9e-15 55.8 0.2 3.5e-15 55.6 0.2 1.1 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 zinc_ribbon_6 PF14599.6 gi|452210855|ref|YP_007490969.1| - 0.011 15.7 2.4 0.095 12.7 0.1 2.1 1 1 1 2 2 2 0 Zinc-ribbon Zn_ribbon_SprT PF17283.2 gi|452210855|ref|YP_007490969.1| - 0.012 15.5 0.6 0.017 15.0 0.6 1.2 1 0 0 1 1 1 0 SprT-like zinc ribbon domain zf-trcl PF13451.6 gi|452210855|ref|YP_007490969.1| - 0.27 11.1 2.7 6.1 6.8 0.3 2.2 2 0 0 2 2 2 0 Probable zinc-ribbon domain zinc_ribbon_6 PF14599.6 gi|452210856|ref|YP_007490970.1| - 0.0019 18.1 0.3 0.0031 17.5 0.3 1.4 1 1 0 1 1 1 1 Zinc-ribbon OrfB_Zn_ribbon PF07282.11 gi|452210856|ref|YP_007490970.1| - 0.056 13.4 1.0 0.074 13.0 1.0 1.2 1 0 0 1 1 1 0 Putative transposase DNA-binding domain eIF-1a PF01176.19 gi|452210857|ref|YP_007490971.1| - 6e-09 35.6 0.7 7.1e-09 35.4 0.7 1.1 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 TPP_enzyme_N PF02776.18 gi|452210858|ref|YP_007490972.1| - 2.1e-53 180.5 1.8 1.1e-52 178.1 0.1 2.2 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|452210858|ref|YP_007490972.1| - 1.7e-29 102.3 0.0 6.9e-29 100.3 0.0 1.9 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain TPP_enzyme_C PF02775.21 gi|452210858|ref|YP_007490972.1| - 1.9e-27 95.9 0.0 7.5e-27 94.0 0.0 2.0 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CO_dh PF02552.16 gi|452210858|ref|YP_007490972.1| - 0.019 14.8 0.0 0.034 13.9 0.0 1.3 1 0 0 1 1 1 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit Aldedh PF00171.22 gi|452210859|ref|YP_007490973.1| - 1.2e-133 446.0 0.0 1.4e-133 445.8 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 gi|452210859|ref|YP_007490973.1| - 0.0015 17.6 0.0 0.0022 17.1 0.0 1.2 1 0 0 1 1 1 1 Acyl-CoA reductase (LuxC) DUF963 PF06131.11 gi|452210860|ref|YP_007490974.1| - 0.3 10.5 10.2 1.5 8.3 0.3 3.5 2 1 1 3 3 3 0 Schizosaccharomyces pombe repeat of unknown function (DUF963) Cupredoxin_1 PF13473.6 gi|452210862|ref|YP_007490976.1| - 1.2e-09 38.2 0.0 1.8e-09 37.6 0.0 1.2 1 0 0 1 1 1 1 Cupredoxin-like domain Copper-bind PF00127.20 gi|452210862|ref|YP_007490976.1| - 8.7e-09 35.7 0.7 0.00037 20.9 0.1 2.2 1 1 1 2 2 2 2 Copper binding proteins, plastocyanin/azurin family Methyltransf_25 PF13649.6 gi|452210864|ref|YP_007490978.1| - 1e-12 48.6 0.0 1.8e-12 47.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|452210864|ref|YP_007490978.1| - 4.7e-09 36.3 0.0 7.4e-09 35.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|452210864|ref|YP_007490978.1| - 4.1e-08 32.6 0.0 5.6e-08 32.2 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_31 PF13847.6 gi|452210864|ref|YP_007490978.1| - 1e-07 31.9 0.0 1.6e-07 31.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|452210864|ref|YP_007490978.1| - 2.4e-07 30.7 0.0 3.5e-07 30.2 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_12 PF08242.12 gi|452210864|ref|YP_007490978.1| - 3.5e-07 30.9 0.0 6.3e-07 30.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|452210864|ref|YP_007490978.1| - 4.1e-07 29.7 0.0 7.1e-07 28.9 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_11 PF08241.12 gi|452210864|ref|YP_007490978.1| - 5.7e-07 30.1 0.0 1e-06 29.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|452210864|ref|YP_007490978.1| - 3.9e-06 26.6 0.0 6.3e-06 26.0 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 GidB PF02527.15 gi|452210864|ref|YP_007490978.1| - 4.4e-06 26.2 0.0 6.7e-06 25.6 0.0 1.3 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G CMAS PF02353.20 gi|452210864|ref|YP_007490978.1| - 2.8e-05 23.6 0.0 5e-05 22.7 0.0 1.4 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase MTS PF05175.14 gi|452210864|ref|YP_007490978.1| - 5.2e-05 22.9 0.0 7.7e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|452210864|ref|YP_007490978.1| - 7e-05 22.4 0.1 0.00017 21.1 0.0 1.6 1 1 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) DREV PF05219.12 gi|452210864|ref|YP_007490978.1| - 0.00031 19.9 0.0 0.00048 19.3 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase Ubie_methyltran PF01209.18 gi|452210864|ref|YP_007490978.1| - 0.00032 20.1 0.0 0.00054 19.4 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Met_10 PF02475.16 gi|452210864|ref|YP_007490978.1| - 0.00099 18.9 0.1 0.0016 18.2 0.1 1.4 1 1 0 1 1 1 1 Met-10+ like-protein Methyltransf_18 PF12847.7 gi|452210864|ref|YP_007490978.1| - 0.0014 18.6 0.0 0.0031 17.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltr_RsmB-F PF01189.17 gi|452210864|ref|YP_007490978.1| - 0.0034 17.0 0.0 0.005 16.5 0.0 1.2 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F tRNA_U5-meth_tr PF05958.11 gi|452210864|ref|YP_007490978.1| - 0.01 14.8 0.0 0.024 13.6 0.0 1.4 1 1 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase Methyltransf_4 PF02390.17 gi|452210864|ref|YP_007490978.1| - 0.011 15.2 0.0 0.022 14.2 0.0 1.5 1 0 0 1 1 1 0 Putative methyltransferase Methyltransf_16 PF10294.9 gi|452210864|ref|YP_007490978.1| - 0.011 15.4 0.0 0.016 14.9 0.0 1.4 1 0 0 1 1 1 0 Lysine methyltransferase GCD14 PF08704.10 gi|452210864|ref|YP_007490978.1| - 0.04 13.6 0.1 0.078 12.6 0.0 1.4 2 0 0 2 2 2 0 tRNA methyltransferase complex GCD14 subunit DUF938 PF06080.12 gi|452210864|ref|YP_007490978.1| - 0.046 13.5 0.0 0.067 13.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF938) TehB PF03848.14 gi|452210864|ref|YP_007490978.1| - 0.12 11.7 0.0 0.19 11.1 0.0 1.3 1 0 0 1 1 1 0 Tellurite resistance protein TehB RimK PF08443.11 gi|452210865|ref|YP_007490979.1| - 2.1e-47 161.2 0.0 3.3e-47 160.5 0.0 1.3 1 0 0 1 1 1 1 RimK-like ATP-grasp domain GSH-S_ATP PF02955.16 gi|452210865|ref|YP_007490979.1| - 3.3e-17 62.4 0.0 1e-16 60.8 0.0 1.7 2 0 0 2 2 2 1 Prokaryotic glutathione synthetase, ATP-grasp domain Rimk_N PF18030.1 gi|452210865|ref|YP_007490979.1| - 5.8e-16 58.7 0.0 1.2e-15 57.6 0.0 1.5 1 0 0 1 1 1 1 RimK PreATP-grasp domain ATP-grasp_3 PF02655.14 gi|452210865|ref|YP_007490979.1| - 1.1e-07 32.0 0.0 1.6e-07 31.5 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_ST PF14397.6 gi|452210865|ref|YP_007490979.1| - 6.5e-05 22.3 0.0 0.0067 15.7 0.0 2.6 1 1 2 3 3 3 1 Sugar-transfer associated ATP-grasp ATPgrasp_YheCD PF14398.6 gi|452210865|ref|YP_007490979.1| - 0.00058 19.2 0.1 0.011 14.9 0.1 2.7 1 1 0 1 1 1 1 YheC/D like ATP-grasp ATP-grasp PF02222.22 gi|452210865|ref|YP_007490979.1| - 0.0011 18.6 0.0 0.0025 17.4 0.0 1.6 1 1 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|452210865|ref|YP_007490979.1| - 0.0012 18.5 0.0 0.0041 16.7 0.0 1.8 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus Synapsin_C PF02750.14 gi|452210865|ref|YP_007490979.1| - 0.0039 16.7 0.0 0.0055 16.2 0.0 1.2 1 0 0 1 1 1 1 Synapsin, ATP binding domain CPSase_L_D2 PF02786.17 gi|452210865|ref|YP_007490979.1| - 0.0086 15.6 0.0 0.04 13.4 0.0 2.0 2 0 0 2 2 2 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Ins134_P3_kin PF05770.11 gi|452210865|ref|YP_007490979.1| - 0.019 14.5 0.0 0.39 10.2 0.0 2.3 1 1 1 2 2 2 0 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain Herpes_HEPA PF03324.14 gi|452210865|ref|YP_007490979.1| - 0.12 12.9 0.0 0.27 11.7 0.0 1.6 1 0 0 1 1 1 0 Herpesvirus DNA helicase/primase complex associated protein TPR_1 PF00515.28 gi|452210866|ref|YP_007490980.1| - 2.5e-92 299.3 39.6 3.8e-10 39.2 0.1 10.1 10 0 0 10 10 10 10 Tetratricopeptide repeat TPR_2 PF07719.17 gi|452210866|ref|YP_007490980.1| - 3.3e-80 257.9 39.1 1.1e-07 31.4 0.4 10.1 10 0 0 10 10 10 10 Tetratricopeptide repeat TPR_11 PF13414.6 gi|452210866|ref|YP_007490980.1| - 7.8e-71 233.5 46.1 2e-09 37.0 0.1 10.1 4 2 6 10 10 10 10 TPR repeat TPR_8 PF13181.6 gi|452210866|ref|YP_007490980.1| - 9.2e-65 209.5 33.9 6.4e-07 29.1 0.1 10.2 10 0 0 10 10 10 10 Tetratricopeptide repeat TPR_17 PF13431.6 gi|452210866|ref|YP_007490980.1| - 3.5e-53 174.2 22.8 2.7e-06 27.4 0.0 10.3 10 0 0 10 10 10 8 Tetratricopeptide repeat TPR_12 PF13424.6 gi|452210866|ref|YP_007490980.1| - 4.9e-52 174.1 41.5 1.6e-10 41.1 0.7 8.0 1 1 8 9 9 9 9 Tetratricopeptide repeat TPR_16 PF13432.6 gi|452210866|ref|YP_007490980.1| - 6.2e-51 170.8 18.5 5.1e-11 43.0 1.2 6.1 1 1 2 6 6 6 6 Tetratricopeptide repeat TPR_14 PF13428.6 gi|452210866|ref|YP_007490980.1| - 1.1e-45 150.4 20.5 3.2e-05 24.4 0.1 10.1 1 1 9 10 10 10 10 Tetratricopeptide repeat TPR_19 PF14559.6 gi|452210866|ref|YP_007490980.1| - 2.7e-40 136.7 24.3 6.1e-08 33.1 0.3 7.4 2 2 4 7 7 7 7 Tetratricopeptide repeat TPR_10 PF13374.6 gi|452210866|ref|YP_007490980.1| - 5.6e-32 108.7 27.5 0.00013 21.8 0.0 10.2 10 0 0 10 10 10 6 Tetratricopeptide repeat TPR_7 PF13176.6 gi|452210866|ref|YP_007490980.1| - 1.6e-31 106.0 18.0 0.0021 18.0 0.0 10.2 8 2 2 10 10 10 7 Tetratricopeptide repeat TPR_9 PF13371.6 gi|452210866|ref|YP_007490980.1| - 1.3e-27 95.7 6.5 3.7e-05 23.8 0.0 6.3 1 1 6 8 8 8 8 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|452210866|ref|YP_007490980.1| - 7.3e-26 90.2 14.5 6.7e-09 35.9 0.1 4.7 3 1 2 5 5 5 4 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 gi|452210866|ref|YP_007490980.1| - 3.6e-24 83.7 18.8 0.5 11.1 0.1 10.2 10 0 0 10 10 10 6 Tetratricopeptide repeat DUF3856 PF12968.7 gi|452210866|ref|YP_007490980.1| - 3.9e-15 56.2 13.7 0.025 14.6 0.1 8.3 1 1 5 6 6 6 3 Domain of Unknown Function (DUF3856) MIT PF04212.18 gi|452210866|ref|YP_007490980.1| - 5.3e-15 55.2 34.9 0.011 15.7 0.1 10.2 9 1 0 10 10 10 5 MIT (microtubule interacting and transport) domain NARP1 PF12569.8 gi|452210866|ref|YP_007490980.1| - 7.4e-14 51.5 8.2 0.019 13.9 0.0 5.2 2 2 3 5 5 5 5 NMDA receptor-regulated protein 1 BTAD PF03704.17 gi|452210866|ref|YP_007490980.1| - 1.7e-12 48.0 7.6 0.0041 17.6 0.6 4.6 1 1 3 5 5 5 3 Bacterial transcriptional activator domain TPR_15 PF13429.6 gi|452210866|ref|YP_007490980.1| - 3.9e-11 42.7 12.6 0.00092 18.5 2.1 4.2 1 1 2 3 3 3 3 Tetratricopeptide repeat PPR PF01535.20 gi|452210866|ref|YP_007490980.1| - 8.8e-11 41.3 9.3 0.54 10.6 0.1 8.6 9 0 0 9 9 9 3 PPR repeat Coatomer_E PF04733.14 gi|452210866|ref|YP_007490980.1| - 4.2e-10 39.5 9.7 3.2e-06 26.8 0.3 4.5 2 2 3 5 5 5 2 Coatomer epsilon subunit TPR_3 PF07720.12 gi|452210866|ref|YP_007490980.1| - 2.7e-09 36.8 23.1 0.15 12.1 0.1 9.3 9 1 1 10 10 9 2 Tetratricopeptide repeat TPR_20 PF14561.6 gi|452210866|ref|YP_007490980.1| - 1.1e-07 32.1 9.3 0.19 12.1 0.1 5.4 3 2 2 5 5 5 2 Tetratricopeptide repeat SHNi-TPR PF10516.9 gi|452210866|ref|YP_007490980.1| - 1.1e-07 31.2 16.9 0.97 8.9 0.2 8.7 9 0 0 9 9 8 1 SHNi-TPR Fis1_TPR_C PF14853.6 gi|452210866|ref|YP_007490980.1| - 1.3e-07 31.5 15.0 0.46 10.6 0.0 8.1 4 4 5 9 9 9 1 Fis1 C-terminal tetratricopeptide repeat SRP_TPR_like PF17004.5 gi|452210866|ref|YP_007490980.1| - 2.2e-07 30.9 11.1 0.18 11.8 1.3 5.7 1 1 5 6 6 6 2 Putative TPR-like repeat TPR_4 PF07721.14 gi|452210866|ref|YP_007490980.1| - 2.9e-07 30.5 0.6 16 6.5 0.0 6.6 6 0 0 6 6 6 0 Tetratricopeptide repeat FAT PF02259.23 gi|452210866|ref|YP_007490980.1| - 1.8e-06 27.4 9.2 0.19 10.9 0.3 5.0 1 1 2 4 4 4 3 FAT domain ANAPC5 PF12862.7 gi|452210866|ref|YP_007490980.1| - 0.00014 21.9 8.6 1.7 8.8 0.1 6.6 5 2 1 7 7 7 1 Anaphase-promoting complex subunit 5 TPR_5 PF12688.7 gi|452210866|ref|YP_007490980.1| - 0.00024 21.3 7.8 0.32 11.2 0.2 5.6 4 2 2 6 6 4 1 Tetratrico peptide repeat Lambda_Kil PF06301.11 gi|452210866|ref|YP_007490980.1| - 0.003 17.1 1.9 38 4.0 0.0 5.7 8 0 0 8 8 5 0 Bacteriophage lambda Kil protein NRBF2_MIT PF17169.4 gi|452210866|ref|YP_007490980.1| - 0.0068 16.6 7.8 38 4.6 0.0 6.6 4 3 4 8 8 7 0 MIT domain of nuclear receptor-binding factor 2 ChAPs PF09295.10 gi|452210866|ref|YP_007490980.1| - 0.009 15.1 0.7 0.26 10.2 0.0 2.3 2 1 0 2 2 2 1 ChAPs (Chs5p-Arf1p-binding proteins) Clathrin PF00637.20 gi|452210866|ref|YP_007490980.1| - 0.014 15.2 13.5 0.2 11.5 0.6 5.3 1 1 3 5 5 5 0 Region in Clathrin and VPS Surfac_D-trimer PF09006.11 gi|452210866|ref|YP_007490980.1| - 0.021 14.7 0.2 1.8 8.5 0.0 3.4 3 0 0 3 3 2 0 Lung surfactant protein D coiled-coil trimerisation RPN7 PF10602.9 gi|452210866|ref|YP_007490980.1| - 0.055 13.2 8.6 0.32 10.7 0.3 4.9 3 1 4 7 7 7 0 26S proteasome subunit RPN7 Alkyl_sulf_dimr PF14863.6 gi|452210866|ref|YP_007490980.1| - 0.06 13.8 3.9 39 4.7 0.2 4.3 2 2 5 7 7 7 0 Alkyl sulfatase dimerisation SMG1 PF15785.5 gi|452210866|ref|YP_007490980.1| - 0.062 11.7 0.8 2.8 6.2 0.0 2.5 2 0 0 2 2 2 0 Serine/threonine-protein kinase smg-1 Csm2_III-A PF03750.13 gi|452210866|ref|YP_007490980.1| - 0.076 13.9 2.7 42 5.0 0.0 4.4 3 1 1 4 4 4 0 Csm2 Type III-A Cir_Bir_Yir PF06022.11 gi|452210866|ref|YP_007490980.1| - 0.26 10.8 3.6 0.65 9.4 0.1 2.2 1 1 0 2 2 2 0 Plasmodium variant antigen protein Cir/Yir/Bir Exonuc_VII_S PF02609.16 gi|452210866|ref|YP_007490980.1| - 0.29 11.2 8.0 14 5.8 0.1 5.4 5 0 0 5 5 5 0 Exonuclease VII small subunit PknG_TPR PF16918.5 gi|452210866|ref|YP_007490980.1| - 0.32 9.7 2.2 0.53 9.0 0.1 2.3 2 1 0 2 2 2 0 Protein kinase G tetratricopeptide repeat UBM PF14377.6 gi|452210866|ref|YP_007490980.1| - 0.35 10.4 1.0 9 5.9 0.2 3.0 3 0 0 3 3 3 0 Ubiquitin binding region HTH_Bact PF18768.1 gi|452210866|ref|YP_007490980.1| - 0.4 10.3 9.0 5.3 6.7 0.0 6.3 8 0 0 8 8 6 0 Helix-turn-helix bacterial domain DUF1510 PF07423.11 gi|452210866|ref|YP_007490980.1| - 3.3 7.9 5.5 8.1 6.7 0.1 4.0 4 3 1 5 5 4 0 Domain of unknown function (DUF1510) Aida_N PF08910.10 gi|452210866|ref|YP_007490980.1| - 8.2 6.9 12.9 32 5.0 0.2 5.0 4 1 1 5 5 5 0 Aida N-terminus HAD_2 PF13419.6 gi|452210867|ref|YP_007490981.1| - 1.8e-30 106.3 0.0 2.3e-30 106.0 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|452210867|ref|YP_007490981.1| - 6.6e-20 72.3 0.1 6.1e-19 69.1 0.1 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|452210867|ref|YP_007490981.1| - 1.3e-09 37.9 0.0 2.5e-09 37.0 0.0 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 gi|452210867|ref|YP_007490981.1| - 2.3e-09 38.0 0.3 3.1e-09 37.5 0.3 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase NT5C PF06941.12 gi|452210867|ref|YP_007490981.1| - 0.011 15.7 0.1 0.1 12.4 0.1 2.3 1 1 0 1 1 1 0 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) Acid_PPase PF12689.7 gi|452210867|ref|YP_007490981.1| - 0.016 15.1 0.0 1.9 8.3 0.0 2.5 2 1 0 2 2 2 0 Acid Phosphatase Hydrolase_6 PF13344.6 gi|452210867|ref|YP_007490981.1| - 0.04 14.0 0.0 0.11 12.7 0.0 1.8 2 1 0 2 2 2 0 Haloacid dehalogenase-like hydrolase Put_Phosphatase PF06888.12 gi|452210867|ref|YP_007490981.1| - 0.061 12.7 0.2 0.13 11.6 0.0 1.6 2 0 0 2 2 2 0 Putative Phosphatase NIF PF03031.18 gi|452210867|ref|YP_007490981.1| - 0.081 12.7 0.1 2.2 8.0 0.1 2.7 1 1 0 1 1 1 0 NLI interacting factor-like phosphatase TPR_1 PF00515.28 gi|452210868|ref|YP_007490982.1| - 6.4e-71 231.5 17.4 2.3e-11 43.0 0.1 8.1 8 0 0 8 8 8 8 Tetratricopeptide repeat TPR_2 PF07719.17 gi|452210868|ref|YP_007490982.1| - 3.5e-54 176.6 15.0 1.9e-08 33.8 0.1 8.1 8 0 0 8 8 8 7 Tetratricopeptide repeat TPR_8 PF13181.6 gi|452210868|ref|YP_007490982.1| - 3.5e-44 145.3 18.4 1.4e-06 28.1 0.1 8.1 8 0 0 8 8 8 8 Tetratricopeptide repeat TPR_12 PF13424.6 gi|452210868|ref|YP_007490982.1| - 5.5e-36 122.7 1.3 4.6e-11 42.8 0.0 5.5 4 1 1 5 5 5 4 Tetratricopeptide repeat TPR_11 PF13414.6 gi|452210868|ref|YP_007490982.1| - 2.1e-34 116.9 13.7 5.2e-06 26.0 0.1 8.4 6 3 3 9 9 9 6 TPR repeat TPR_17 PF13431.6 gi|452210868|ref|YP_007490982.1| - 2.3e-32 109.0 7.7 0.00016 21.8 0.1 8.3 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_16 PF13432.6 gi|452210868|ref|YP_007490982.1| - 1.2e-29 102.6 1.4 1.8e-08 34.9 0.0 4.8 2 2 2 5 5 5 5 Tetratricopeptide repeat TPR_14 PF13428.6 gi|452210868|ref|YP_007490982.1| - 1.2e-26 91.1 8.4 0.00038 21.0 0.0 7.9 2 2 6 8 8 8 7 Tetratricopeptide repeat TPR_19 PF14559.6 gi|452210868|ref|YP_007490982.1| - 3.6e-25 88.3 5.5 6.1e-08 33.1 0.1 5.6 3 2 3 6 6 6 5 Tetratricopeptide repeat TPR_9 PF13371.6 gi|452210868|ref|YP_007490982.1| - 2.4e-24 85.3 0.1 0.00044 20.3 0.2 6.0 2 1 5 7 7 7 6 Tetratricopeptide repeat TPR_10 PF13374.6 gi|452210868|ref|YP_007490982.1| - 7.4e-20 70.2 9.4 0.024 14.5 0.1 7.1 7 0 0 7 7 7 5 Tetratricopeptide repeat TPR_6 PF13174.6 gi|452210868|ref|YP_007490982.1| - 7.7e-18 63.9 8.6 0.15 12.7 0.1 7.6 8 0 0 8 8 7 5 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|452210868|ref|YP_007490982.1| - 4.7e-13 49.2 5.5 0.0017 18.5 0.0 5.0 1 1 4 5 5 5 3 Anaphase-promoting complex, cyclosome, subunit 3 DUF3856 PF12968.7 gi|452210868|ref|YP_007490982.1| - 4.9e-12 46.1 6.1 0.0036 17.4 0.0 6.1 1 1 5 6 6 6 3 Domain of Unknown Function (DUF3856) Fis1_TPR_C PF14853.6 gi|452210868|ref|YP_007490982.1| - 6.7e-11 42.1 4.5 0.082 13.0 0.1 5.3 4 2 2 6 6 5 3 Fis1 C-terminal tetratricopeptide repeat TPR_7 PF13176.6 gi|452210868|ref|YP_007490982.1| - 3.3e-09 36.1 9.0 0.18 11.9 0.1 7.1 5 2 2 7 7 7 1 Tetratricopeptide repeat SRP_TPR_like PF17004.5 gi|452210868|ref|YP_007490982.1| - 1.1e-08 35.1 5.9 0.001 19.1 0.1 3.6 1 1 3 4 4 4 2 Putative TPR-like repeat NARP1 PF12569.8 gi|452210868|ref|YP_007490982.1| - 8.8e-07 28.2 4.6 0.054 12.4 0.2 3.7 1 1 1 3 3 3 3 NMDA receptor-regulated protein 1 MIT PF04212.18 gi|452210868|ref|YP_007490982.1| - 1.8e-06 27.9 15.3 0.45 10.6 0.1 6.8 3 3 5 8 8 8 1 MIT (microtubule interacting and transport) domain ChAPs PF09295.10 gi|452210868|ref|YP_007490982.1| - 4.4e-05 22.7 0.2 0.069 12.1 0.0 2.2 2 0 0 2 2 2 2 ChAPs (Chs5p-Arf1p-binding proteins) TPR_20 PF14561.6 gi|452210868|ref|YP_007490982.1| - 4.6e-05 23.7 1.1 5.8 7.3 0.0 4.1 3 1 0 4 4 4 0 Tetratricopeptide repeat TOM20_plant PF06552.12 gi|452210868|ref|YP_007490982.1| - 0.00011 22.0 2.9 0.034 13.9 0.0 4.2 2 2 3 5 5 5 1 Plant specific mitochondrial import receptor subunit TOM20 DUF627 PF04781.12 gi|452210868|ref|YP_007490982.1| - 0.00019 21.4 0.2 0.28 11.2 0.0 3.8 3 2 1 4 4 4 1 Protein of unknown function (DUF627) HTH_Bact PF18768.1 gi|452210868|ref|YP_007490982.1| - 0.00027 20.5 3.5 24 4.6 0.0 6.8 7 0 0 7 7 7 0 Helix-turn-helix bacterial domain FAT PF02259.23 gi|452210868|ref|YP_007490982.1| - 0.00029 20.2 1.0 0.47 9.6 0.1 3.3 1 1 2 3 3 3 2 FAT domain RPN7 PF10602.9 gi|452210868|ref|YP_007490982.1| - 0.0022 17.7 6.2 0.05 13.3 1.2 3.6 2 1 1 3 3 3 1 26S proteasome subunit RPN7 TPR_3 PF07720.12 gi|452210868|ref|YP_007490982.1| - 0.0065 16.4 6.6 0.96 9.5 0.0 5.5 7 0 0 7 7 5 1 Tetratricopeptide repeat DUF5113 PF17140.4 gi|452210868|ref|YP_007490982.1| - 0.012 15.5 1.0 24 4.7 0.0 4.4 3 2 2 5 5 5 0 Domain of unknown function (DUF5113) BofC_C PF08955.10 gi|452210868|ref|YP_007490982.1| - 0.015 15.3 0.0 20 5.3 0.0 4.1 4 1 1 5 5 4 0 BofC C-terminal domain BTAD PF03704.17 gi|452210868|ref|YP_007490982.1| - 0.018 15.5 2.1 3.4 8.1 0.0 3.4 4 1 0 4 4 3 0 Bacterial transcriptional activator domain DUF4919 PF16266.5 gi|452210868|ref|YP_007490982.1| - 0.03 14.3 0.4 0.31 11.0 0.0 2.5 2 1 1 3 3 3 0 Domain of unknown function (DUF4919) DUF2550 PF10739.9 gi|452210868|ref|YP_007490982.1| - 0.043 13.8 0.0 0.065 13.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2550) SHNi-TPR PF10516.9 gi|452210868|ref|YP_007490982.1| - 0.14 11.7 10.6 5.4 6.5 0.1 5.1 5 0 0 5 5 5 0 SHNi-TPR Sam68-YY PF16568.5 gi|452210868|ref|YP_007490982.1| - 0.16 12.7 0.2 2.8 8.8 0.0 2.9 3 0 0 3 3 2 0 Tyrosine-rich domain of Sam68 TcdB_N PF12918.7 gi|452210868|ref|YP_007490982.1| - 0.21 11.9 2.9 3.7 7.9 0.5 2.9 2 0 0 2 2 2 0 TcdB toxin N-terminal helical domain UPF0122 PF04297.14 gi|452210868|ref|YP_007490982.1| - 0.36 11.1 3.0 3.9 7.8 0.0 3.8 4 2 1 5 5 4 0 Putative helix-turn-helix protein, YlxM / p13 like Response_reg PF00072.24 gi|452210870|ref|YP_007490984.1| - 5.1e-18 65.3 0.0 8e-18 64.6 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain HTH_24 PF13412.6 gi|452210870|ref|YP_007490984.1| - 6.8e-05 22.4 0.6 0.00016 21.2 0.6 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|452210870|ref|YP_007490984.1| - 0.001 18.9 0.2 0.0017 18.1 0.2 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.12 gi|452210870|ref|YP_007490984.1| - 0.0019 18.1 0.3 0.0049 16.8 0.3 1.7 1 0 0 1 1 1 1 HTH domain HSDR_N PF04313.14 gi|452210870|ref|YP_007490984.1| - 0.036 14.0 0.7 0.13 12.2 0.8 1.5 1 1 1 2 2 2 0 Type I restriction enzyme R protein N terminus (HSDR_N) HTH_Mga PF08280.11 gi|452210870|ref|YP_007490984.1| - 0.064 13.3 0.1 0.34 11.0 0.1 1.9 2 0 0 2 2 2 0 M protein trans-acting positive regulator (MGA) HTH domain GATase_7 PF13537.6 gi|452210870|ref|YP_007490984.1| - 0.13 12.1 0.0 0.2 11.6 0.0 1.3 1 0 0 1 1 1 0 Glutamine amidotransferase domain MarR_2 PF12802.7 gi|452210871|ref|YP_007490985.1| - 2.2e-05 24.2 0.0 3.1e-05 23.8 0.0 1.1 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|452210871|ref|YP_007490985.1| - 0.00013 21.7 0.0 0.00016 21.4 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.6 gi|452210871|ref|YP_007490985.1| - 0.00044 19.7 0.1 0.00062 19.3 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|452210871|ref|YP_007490985.1| - 0.00095 19.0 0.0 0.0014 18.5 0.0 1.2 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|452210871|ref|YP_007490985.1| - 0.0038 17.1 0.0 0.0055 16.6 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.20 gi|452210871|ref|YP_007490985.1| - 0.0041 16.9 0.1 0.0056 16.5 0.1 1.2 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 gi|452210871|ref|YP_007490985.1| - 0.006 16.5 0.0 0.0083 16.0 0.0 1.3 1 0 0 1 1 1 1 HTH domain Rrf2 PF02082.20 gi|452210871|ref|YP_007490985.1| - 0.01 16.2 0.0 0.015 15.7 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator HTH_9 PF08221.11 gi|452210871|ref|YP_007490985.1| - 0.02 15.0 0.1 0.033 14.3 0.1 1.3 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|452210871|ref|YP_007490985.1| - 0.022 14.7 0.0 0.034 14.1 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_20 PF12840.7 gi|452210871|ref|YP_007490985.1| - 0.065 13.3 0.0 0.084 12.9 0.0 1.1 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_36 PF13730.6 gi|452210871|ref|YP_007490985.1| - 0.069 13.1 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Phage_rep_O PF04492.13 gi|452210871|ref|YP_007490985.1| - 0.084 13.5 0.0 0.11 13.1 0.0 1.3 1 0 0 1 1 1 0 Bacteriophage replication protein O Pyr_redox_2 PF07992.14 gi|452210872|ref|YP_007490986.1| - 4.6e-47 160.7 1.1 5.6e-47 160.4 1.1 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|452210872|ref|YP_007490986.1| - 7.7e-31 107.5 4.2 4.2e-23 82.0 0.2 2.0 1 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|452210872|ref|YP_007490986.1| - 3.3e-15 56.4 7.6 2.3e-12 47.3 0.4 3.8 2 2 2 4 4 4 2 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|452210872|ref|YP_007490986.1| - 5.4e-09 35.9 0.8 5.3e-06 26.0 0.0 2.9 2 1 1 3 3 3 2 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|452210872|ref|YP_007490986.1| - 1.4e-08 33.9 1.5 0.0002 20.2 0.1 3.1 3 0 0 3 3 3 2 HI0933-like protein DAO PF01266.24 gi|452210872|ref|YP_007490986.1| - 1.6e-07 31.3 3.2 0.0023 17.6 0.5 3.1 3 0 0 3 3 3 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|452210872|ref|YP_007490986.1| - 5.2e-07 29.8 0.1 8.8e-05 22.7 0.0 2.4 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 gi|452210872|ref|YP_007490986.1| - 9.3e-07 28.4 0.9 3.5e-05 23.2 0.1 2.5 3 0 0 3 3 3 1 FAD binding domain FAD_binding_2 PF00890.24 gi|452210872|ref|YP_007490986.1| - 2.6e-06 26.8 2.7 0.00013 21.2 0.1 3.6 3 1 0 4 4 4 1 FAD binding domain Thi4 PF01946.17 gi|452210872|ref|YP_007490986.1| - 2.2e-05 23.8 2.1 0.0022 17.3 0.1 3.4 4 0 0 4 4 4 1 Thi4 family GIDA PF01134.22 gi|452210872|ref|YP_007490986.1| - 3.3e-05 23.1 9.6 0.0046 16.1 0.1 3.8 3 2 2 5 5 5 2 Glucose inhibited division protein A K_oxygenase PF13434.6 gi|452210872|ref|YP_007490986.1| - 0.00018 20.7 1.0 0.03 13.5 0.1 2.9 2 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_9 PF13454.6 gi|452210872|ref|YP_007490986.1| - 0.0027 17.7 3.3 0.074 13.0 0.1 2.9 3 0 0 3 3 3 1 FAD-NAD(P)-binding Lycopene_cycl PF05834.12 gi|452210872|ref|YP_007490986.1| - 0.0064 15.6 0.9 0.99 8.4 0.1 2.4 3 0 0 3 3 3 2 Lycopene cyclase protein FMO-like PF00743.19 gi|452210872|ref|YP_007490986.1| - 0.017 13.5 0.0 0.03 12.7 0.0 1.5 1 1 0 1 1 1 0 Flavin-binding monooxygenase-like Trp_halogenase PF04820.14 gi|452210872|ref|YP_007490986.1| - 0.047 12.5 1.8 4.9 5.9 0.1 3.0 3 0 0 3 3 3 0 Tryptophan halogenase NAD_binding_7 PF13241.6 gi|452210872|ref|YP_007490986.1| - 0.14 12.7 1.1 1.1 9.7 0.4 2.4 2 1 0 2 2 2 0 Putative NAD(P)-binding TP_methylase PF00590.20 gi|452210873|ref|YP_007490987.1| - 1.2e-18 67.8 0.0 1.5e-18 67.6 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases DUF357 PF04010.13 gi|452210874|ref|YP_007490988.1| - 5.8e-32 109.6 1.1 6.7e-32 109.4 1.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF357) DUF555 PF04475.12 gi|452210875|ref|YP_007490989.1| - 3.6e-49 165.2 0.1 4.5e-49 164.9 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF555) Dodecin PF07311.12 gi|452210875|ref|YP_007490989.1| - 0.0042 17.3 0.5 1.1 9.5 0.0 2.3 2 0 0 2 2 2 2 Dodecin Rad50_zn_hook PF04423.14 gi|452210875|ref|YP_007490989.1| - 0.075 12.9 0.4 0.16 11.8 0.1 1.6 2 0 0 2 2 2 0 Rad50 zinc hook motif Zn-C2H2_12 PF18112.1 gi|452210875|ref|YP_007490989.1| - 1.5 9.4 5.0 0.89 10.1 1.4 2.2 2 0 0 2 2 2 0 Autophagy receptor zinc finger-C2H2 domain PfkB PF00294.24 gi|452210877|ref|YP_007490991.1| - 3.3e-55 187.5 0.0 3.9e-55 187.3 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase HAP2-GCS1 PF10699.9 gi|452210877|ref|YP_007490991.1| - 0.063 13.3 0.0 0.12 12.4 0.0 1.4 1 0 0 1 1 1 0 Male gamete fusion factor Diphthami_syn_2 PF01902.17 gi|452210878|ref|YP_007490992.1| - 4.7e-72 242.0 0.2 5.4e-72 241.9 0.2 1.0 1 0 0 1 1 1 1 Diphthamide synthase AIRC PF00731.20 gi|452210879|ref|YP_007490993.1| - 5.5e-43 146.1 0.9 6.5e-43 145.8 0.9 1.0 1 0 0 1 1 1 1 AIR carboxylase DXP_reductoisom PF02670.16 gi|452210879|ref|YP_007490993.1| - 0.051 14.3 0.0 0.071 13.8 0.0 1.4 1 1 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase mIF3 PF14877.6 gi|452210879|ref|YP_007490993.1| - 0.16 11.6 0.0 0.17 11.5 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial translation initiation factor CM_2 PF01817.21 gi|452210880|ref|YP_007490994.1| - 4.4e-14 52.6 4.5 5e-14 52.4 4.5 1.0 1 0 0 1 1 1 1 Chorismate mutase type II FTCD_C PF04961.12 gi|452210880|ref|YP_007490994.1| - 0.0053 16.5 0.3 0.0057 16.4 0.3 1.0 1 0 0 1 1 1 1 Formiminotransferase-cyclodeaminase GHMP_kinases_N PF00288.26 gi|452210881|ref|YP_007490995.1| - 4.3e-12 46.1 1.1 9.6e-12 45.0 1.1 1.6 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|452210881|ref|YP_007490995.1| - 3.4e-05 24.1 0.3 0.00014 22.2 0.1 2.0 2 0 0 2 2 2 1 GHMP kinases C terminal FlpD PF02662.16 gi|452210881|ref|YP_007490995.1| - 0.069 13.2 0.0 0.16 12.0 0.0 1.5 1 0 0 1 1 1 0 Methyl-viologen-reducing hydrogenase, delta subunit PhoU PF01895.19 gi|452210882|ref|YP_007490996.1| - 4.8e-26 91.0 5.2 4.6e-16 59.0 0.1 2.4 2 0 0 2 2 2 2 PhoU domain HSBP1 PF06825.12 gi|452210882|ref|YP_007490996.1| - 0.035 14.0 0.6 1 9.3 0.2 2.9 2 0 0 2 2 2 0 Heat shock factor binding protein 1 FliS PF02561.14 gi|452210882|ref|YP_007490996.1| - 0.086 13.1 0.0 0.18 12.1 0.0 1.5 1 0 0 1 1 1 0 Flagellar protein FliS PspA_IM30 PF04012.12 gi|452210882|ref|YP_007490996.1| - 0.1 12.2 0.0 1.7 8.2 0.0 2.2 2 0 0 2 2 2 0 PspA/IM30 family HAMP PF00672.25 gi|452210882|ref|YP_007490996.1| - 0.13 12.7 3.2 9.2 6.7 0.1 3.1 4 0 0 4 4 4 0 HAMP domain MMR_HSR1 PF01926.23 gi|452210884|ref|YP_007490998.1| - 1.4e-16 60.6 0.1 2.1e-16 60.0 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 gi|452210884|ref|YP_007490998.1| - 8.5e-15 54.8 3.2 9e-07 28.6 0.8 2.9 1 1 1 2 2 2 2 Elongation factor Tu GTP binding domain Septin PF00735.18 gi|452210884|ref|YP_007490998.1| - 3.8e-06 26.4 0.1 4.4e-06 26.2 0.1 1.1 1 0 0 1 1 1 1 Septin Arf PF00025.21 gi|452210884|ref|YP_007490998.1| - 4.3e-06 26.3 0.0 0.011 15.2 0.0 2.4 2 0 0 2 2 2 2 ADP-ribosylation factor family RsgA_GTPase PF03193.16 gi|452210884|ref|YP_007490998.1| - 6.1e-06 26.2 0.2 0.0073 16.2 0.1 2.1 2 0 0 2 2 2 2 RsgA GTPase Roc PF08477.13 gi|452210884|ref|YP_007490998.1| - 5.5e-05 23.4 0.2 0.023 14.9 0.0 2.2 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 gi|452210884|ref|YP_007490998.1| - 0.00055 19.4 0.0 0.041 13.3 0.0 2.4 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit AAA_24 PF13479.6 gi|452210884|ref|YP_007490998.1| - 0.00093 19.0 0.1 0.0013 18.5 0.1 1.2 1 0 0 1 1 1 1 AAA domain FeoB_N PF02421.18 gi|452210884|ref|YP_007490998.1| - 0.0021 17.6 0.6 0.017 14.7 0.6 2.4 1 1 0 1 1 1 1 Ferrous iron transport protein B AAA_18 PF13238.6 gi|452210884|ref|YP_007490998.1| - 0.0062 17.1 0.0 0.014 15.9 0.0 1.7 1 1 0 1 1 1 1 AAA domain Ras PF00071.22 gi|452210884|ref|YP_007490998.1| - 0.0086 15.7 0.0 3.1 7.4 0.0 2.5 2 1 0 2 2 2 2 Ras family ABC_tran PF00005.27 gi|452210884|ref|YP_007490998.1| - 0.011 16.2 0.0 0.015 15.8 0.0 1.2 1 0 0 1 1 1 0 ABC transporter NB-ARC PF00931.22 gi|452210884|ref|YP_007490998.1| - 0.014 14.6 0.1 0.016 14.4 0.1 1.3 1 0 0 1 1 1 0 NB-ARC domain MobB PF03205.14 gi|452210884|ref|YP_007490998.1| - 0.019 14.9 0.2 0.038 13.9 0.0 1.6 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B ATPase_2 PF01637.18 gi|452210884|ref|YP_007490998.1| - 0.026 14.4 0.0 0.034 14.1 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea MMR_HSR1_Xtn PF16897.5 gi|452210884|ref|YP_007490998.1| - 0.031 14.3 0.0 0.054 13.5 0.0 1.5 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain AAA_16 PF13191.6 gi|452210884|ref|YP_007490998.1| - 0.039 14.3 0.0 0.058 13.8 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA_35 PF14516.6 gi|452210884|ref|YP_007490998.1| - 0.04 12.8 0.0 0.057 12.2 0.0 1.3 1 0 0 1 1 1 0 AAA-like domain AAA PF00004.29 gi|452210884|ref|YP_007490998.1| - 0.046 14.2 0.1 0.1 13.1 0.1 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.22 gi|452210884|ref|YP_007490998.1| - 0.091 13.2 0.0 0.18 12.2 0.0 1.5 1 0 0 1 1 1 0 RNA helicase Parvo_NS1 PF01057.17 gi|452210884|ref|YP_007490998.1| - 0.093 11.8 0.0 0.14 11.3 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 NTPase_1 PF03266.15 gi|452210884|ref|YP_007490998.1| - 0.1 12.5 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 NTPase TniB PF05621.11 gi|452210884|ref|YP_007490998.1| - 0.13 11.7 0.0 0.46 9.9 0.0 1.8 1 1 1 2 2 2 0 Bacterial TniB protein PPV_E1_C PF00519.17 gi|452210884|ref|YP_007490998.1| - 0.23 10.3 0.1 0.33 9.7 0.1 1.2 1 0 0 1 1 1 0 Papillomavirus helicase DUF2073 PF09846.9 gi|452210885|ref|YP_007490999.1| - 1.7e-46 156.4 0.5 2e-46 156.2 0.5 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2073) GatB_Yqey PF02637.18 gi|452210885|ref|YP_007490999.1| - 0.007 16.3 1.2 0.009 15.9 1.1 1.3 1 1 0 1 1 1 1 GatB domain SIS PF01380.22 gi|452210887|ref|YP_007491001.1| - 5.9e-18 65.0 0.1 9.1e-18 64.4 0.1 1.3 1 0 0 1 1 1 1 SIS domain SIS_2 PF13580.6 gi|452210887|ref|YP_007491001.1| - 2.2e-05 24.5 2.4 0.07 13.2 0.1 2.2 1 1 1 2 2 2 2 SIS domain THF_DHG_CYH_C PF02882.19 gi|452210887|ref|YP_007491001.1| - 0.0066 15.8 1.2 0.0091 15.3 1.2 1.2 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Glu_dehyd_C PF16912.5 gi|452210887|ref|YP_007491001.1| - 0.018 14.5 0.1 0.03 13.8 0.1 1.5 1 1 0 1 1 1 0 Glucose dehydrogenase C-terminus Aminotran_1_2 PF00155.21 gi|452210888|ref|YP_007491002.1| - 9e-69 232.4 0.0 1.1e-68 232.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|452210888|ref|YP_007491002.1| - 2.8e-11 43.3 0.0 4.4e-11 42.7 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 gi|452210888|ref|YP_007491002.1| - 9.1e-11 41.3 0.0 1.5e-10 40.6 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|452210888|ref|YP_007491002.1| - 1.4e-09 37.0 0.1 2.1e-09 36.4 0.1 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 gi|452210888|ref|YP_007491002.1| - 5.8e-05 22.5 0.0 7.9e-05 22.1 0.0 1.5 1 1 0 1 1 1 1 Beta-eliminating lyase DsbD PF02683.15 gi|452210889|ref|YP_007491003.1| - 8.2e-17 61.8 11.7 1.1e-16 61.4 11.7 1.1 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DsbD_2 PF13386.6 gi|452210889|ref|YP_007491003.1| - 4e-10 40.0 6.1 5.8e-10 39.4 6.1 1.4 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region NOG1_N PF17835.1 gi|452210890|ref|YP_007491004.1| - 1.6e-46 158.2 0.2 2.6e-46 157.5 0.2 1.3 1 0 0 1 1 1 1 NOG1 N-terminal helical domain NOG1 PF06858.14 gi|452210890|ref|YP_007491004.1| - 2e-21 75.5 0.1 3.7e-21 74.7 0.1 1.5 1 0 0 1 1 1 1 Nucleolar GTP-binding protein 1 (NOG1) MMR_HSR1 PF01926.23 gi|452210890|ref|YP_007491004.1| - 3.7e-20 72.1 0.0 9.3e-20 70.8 0.0 1.7 2 0 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|452210890|ref|YP_007491004.1| - 2.7e-11 43.3 0.0 4.6e-11 42.5 0.0 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B Arf PF00025.21 gi|452210890|ref|YP_007491004.1| - 7.6e-06 25.5 0.0 5e-05 22.8 0.0 2.2 1 1 0 1 1 1 1 ADP-ribosylation factor family RsgA_GTPase PF03193.16 gi|452210890|ref|YP_007491004.1| - 6.9e-05 22.8 0.3 0.01 15.7 0.0 2.7 1 1 1 2 2 2 1 RsgA GTPase GTP_EFTU PF00009.27 gi|452210890|ref|YP_007491004.1| - 0.00069 19.2 0.0 0.0074 15.8 0.0 2.4 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain AIG1 PF04548.16 gi|452210890|ref|YP_007491004.1| - 0.0061 15.9 0.0 0.01 15.2 0.0 1.4 1 0 0 1 1 1 1 AIG1 family MeaB PF03308.16 gi|452210890|ref|YP_007491004.1| - 0.021 13.8 0.0 1.9 7.4 0.0 2.7 2 1 1 3 3 3 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_24 PF13479.6 gi|452210890|ref|YP_007491004.1| - 0.042 13.6 0.1 2 8.1 0.0 2.3 2 0 0 2 2 2 0 AAA domain Roc PF08477.13 gi|452210890|ref|YP_007491004.1| - 0.07 13.4 0.0 0.89 9.8 0.0 2.4 1 1 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase HrcA_DNA-bdg PF03444.15 gi|452210891|ref|YP_007491005.1| - 1.1e-37 127.6 0.3 3e-37 126.1 0.3 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CBS PF00571.28 gi|452210891|ref|YP_007491005.1| - 8.1e-23 80.6 0.5 1.6e-10 41.2 0.0 2.7 2 0 0 2 2 2 2 CBS domain Rrf2 PF02082.20 gi|452210891|ref|YP_007491005.1| - 3.7e-07 30.4 0.1 1.4e-06 28.6 0.0 2.0 2 0 0 2 2 2 1 Transcriptional regulator HTH_11 PF08279.12 gi|452210891|ref|YP_007491005.1| - 4.9e-06 26.4 0.1 1.3e-05 25.0 0.1 1.8 1 0 0 1 1 1 1 HTH domain MarR_2 PF12802.7 gi|452210891|ref|YP_007491005.1| - 0.057 13.3 0.0 0.28 11.1 0.0 2.2 2 0 0 2 2 2 0 MarR family Sigma70_r4_2 PF08281.12 gi|452210891|ref|YP_007491005.1| - 0.073 12.8 0.0 0.32 10.7 0.0 2.0 2 0 0 2 2 2 0 Sigma-70, region 4 PRA-PH PF01503.17 gi|452210892|ref|YP_007491006.1| - 8.1e-14 51.8 0.2 9.2e-14 51.7 0.2 1.1 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase MazG PF03819.17 gi|452210892|ref|YP_007491006.1| - 0.00014 22.0 1.2 0.00019 21.6 1.2 1.2 1 0 0 1 1 1 1 MazG nucleotide pyrophosphohydrolase domain Aconitase PF00330.20 gi|452210893|ref|YP_007491007.1| - 7.5e-91 305.4 0.0 7.6e-89 298.8 0.0 2.1 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) CxxCxxCC PF03692.15 gi|452210894|ref|YP_007491008.1| - 2.2e-13 50.7 7.6 5.6e-12 46.2 5.3 3.0 1 1 1 2 2 2 1 Putative zinc- or iron-chelating domain ACT PF01842.25 gi|452210895|ref|YP_007491009.1| - 2.2e-07 30.5 0.0 5.8e-07 29.2 0.0 1.7 1 0 0 1 1 1 1 ACT domain Transketolase_C PF02780.20 gi|452210895|ref|YP_007491009.1| - 0.0079 16.1 0.2 0.18 11.7 0.0 2.1 1 1 1 2 2 2 2 Transketolase, C-terminal domain NT5C PF06941.12 gi|452210897|ref|YP_007491011.1| - 4.4e-07 30.0 0.0 3.5e-05 23.8 0.0 2.1 1 1 0 1 1 1 1 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) HAD_SAK_2 PF18143.1 gi|452210897|ref|YP_007491011.1| - 0.0082 16.5 0.0 0.014 15.7 0.0 1.5 1 1 0 1 1 1 1 HAD domain in Swiss Army Knife RNA repair proteins RDD PF06271.12 gi|452210898|ref|YP_007491012.1| - 1.3e-22 80.5 5.3 1.6e-22 80.2 5.3 1.1 1 0 0 1 1 1 1 RDD family DUF373 PF04123.13 gi|452210900|ref|YP_007491014.1| - 5.6e-118 394.2 11.3 6.4e-118 394.0 11.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF373) PNP_UDP_1 PF01048.20 gi|452210901|ref|YP_007491015.1| - 1e-42 146.0 0.1 1.2e-42 145.8 0.1 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily DEAD PF00270.29 gi|452210902|ref|YP_007491016.1| - 5.5e-23 81.6 0.0 1e-22 80.7 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|452210902|ref|YP_007491016.1| - 1.9e-16 60.4 0.0 5.2e-16 59.0 0.0 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|452210902|ref|YP_007491016.1| - 2.3e-11 44.0 0.0 5e-11 42.9 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Ribosomal_S13_N PF08069.12 gi|452210902|ref|YP_007491016.1| - 0.035 14.1 0.0 0.2 11.7 0.0 2.4 2 0 0 2 2 2 0 Ribosomal S13/S15 N-terminal domain SNF2_N PF00176.23 gi|452210902|ref|YP_007491016.1| - 0.039 12.7 0.0 0.051 12.3 0.0 1.2 1 0 0 1 1 1 0 SNF2 family N-terminal domain DUF3467 PF11950.8 gi|452210903|ref|YP_007491017.1| - 5.3e-18 65.0 0.0 7e-18 64.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3467) PCP_red PF08369.10 gi|452210903|ref|YP_007491017.1| - 0.0082 16.3 0.0 0.018 15.3 0.0 1.5 1 0 0 1 1 1 1 Proto-chlorophyllide reductase 57 kD subunit LSM PF01423.22 gi|452210905|ref|YP_007491019.1| - 3.3e-17 61.9 0.6 3.4e-17 61.9 0.6 1.0 1 0 0 1 1 1 1 LSM domain DUF2291 PF10054.9 gi|452210905|ref|YP_007491019.1| - 0.13 12.0 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 Predicted periplasmic lipoprotein (DUF2291) B-block_TFIIIC PF04182.12 gi|452210906|ref|YP_007491020.1| - 0.00038 20.5 0.1 0.00056 20.0 0.1 1.2 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC MarR_2 PF12802.7 gi|452210906|ref|YP_007491020.1| - 0.0033 17.3 0.0 0.017 15.0 0.0 1.9 2 0 0 2 2 2 1 MarR family HTH_24 PF13412.6 gi|452210906|ref|YP_007491020.1| - 0.038 13.5 0.1 0.089 12.4 0.1 1.7 1 1 1 2 2 2 0 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|452210906|ref|YP_007491020.1| - 0.064 13.2 0.0 0.096 12.6 0.0 1.3 1 0 0 1 1 1 0 MarR family TrmB PF01978.19 gi|452210906|ref|YP_007491020.1| - 0.066 13.1 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB SF3a60_bindingd PF12108.8 gi|452210908|ref|YP_007491022.1| - 0.35 10.8 1.5 0.64 10.0 1.5 1.4 1 0 0 1 1 1 0 Splicing factor SF3a60 binding domain TrpP PF17099.5 gi|452210910|ref|YP_007491024.1| - 1.8e-06 27.8 23.0 2.6e-06 27.3 23.0 1.2 1 0 0 1 1 1 1 Tryptophan transporter TrpP ABC_tran PF00005.27 gi|452210911|ref|YP_007491025.1| - 2.8e-56 189.8 1.3 5.7e-28 98.1 0.0 2.6 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 gi|452210911|ref|YP_007491025.1| - 3e-18 66.7 5.5 2.6e-06 27.5 0.0 4.1 2 2 1 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|452210911|ref|YP_007491025.1| - 6.7e-17 61.7 2.8 6.4e-08 32.3 0.2 2.8 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|452210911|ref|YP_007491025.1| - 9.5e-10 39.3 4.2 0.00041 20.9 0.1 2.4 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.6 gi|452210911|ref|YP_007491025.1| - 3.4e-08 34.1 3.1 0.0044 17.4 0.1 2.9 2 2 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.6 gi|452210911|ref|YP_007491025.1| - 4.4e-08 32.7 0.2 0.0024 17.6 0.0 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain SbcCD_C PF13558.6 gi|452210911|ref|YP_007491025.1| - 1.9e-07 31.2 3.0 0.038 14.2 0.8 3.7 2 2 0 2 2 2 2 Putative exonuclease SbcCD, C subunit IstB_IS21 PF01695.17 gi|452210911|ref|YP_007491025.1| - 8.8e-07 28.8 5.4 0.2 11.4 0.1 4.2 4 0 0 4 4 4 2 IstB-like ATP binding protein AAA_22 PF13401.6 gi|452210911|ref|YP_007491025.1| - 2.6e-06 27.8 7.2 0.027 14.7 1.1 3.6 2 2 0 2 2 2 2 AAA domain AAA_30 PF13604.6 gi|452210911|ref|YP_007491025.1| - 9.1e-06 25.5 4.7 0.0025 17.6 0.0 3.1 2 2 0 2 2 2 1 AAA domain AAA_25 PF13481.6 gi|452210911|ref|YP_007491025.1| - 1.1e-05 25.0 1.7 0.027 14.0 0.1 3.7 4 0 0 4 4 4 1 AAA domain RsgA_GTPase PF03193.16 gi|452210911|ref|YP_007491025.1| - 1.2e-05 25.2 0.9 0.013 15.5 0.1 2.5 2 0 0 2 2 2 2 RsgA GTPase AAA_27 PF13514.6 gi|452210911|ref|YP_007491025.1| - 3.7e-05 23.4 0.3 0.057 13.0 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_15 PF13175.6 gi|452210911|ref|YP_007491025.1| - 0.00017 21.4 3.0 0.02 14.6 0.1 3.4 1 1 1 3 3 3 1 AAA ATPase domain DLIC PF05783.11 gi|452210911|ref|YP_007491025.1| - 0.0002 20.3 0.9 0.031 13.1 0.1 2.2 2 0 0 2 2 2 1 Dynein light intermediate chain (DLIC) AAA PF00004.29 gi|452210911|ref|YP_007491025.1| - 0.00032 21.1 5.9 0.36 11.2 0.1 4.1 3 1 1 4 4 4 1 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 gi|452210911|ref|YP_007491025.1| - 0.00035 20.7 2.1 1.8 8.7 0.1 3.3 3 0 0 3 3 3 2 AAA domain NACHT PF05729.12 gi|452210911|ref|YP_007491025.1| - 0.00037 20.5 0.1 0.0092 15.9 0.0 2.4 2 0 0 2 2 2 1 NACHT domain TsaE PF02367.17 gi|452210911|ref|YP_007491025.1| - 0.00084 19.3 1.0 0.58 10.2 0.0 2.6 3 0 0 3 3 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE RNA_helicase PF00910.22 gi|452210911|ref|YP_007491025.1| - 0.00088 19.6 0.0 2.5 8.5 0.0 2.9 2 0 0 2 2 2 1 RNA helicase Mg_chelatase PF01078.21 gi|452210911|ref|YP_007491025.1| - 0.001 18.5 0.9 0.38 10.1 0.0 3.1 3 0 0 3 3 3 1 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 gi|452210911|ref|YP_007491025.1| - 0.0011 18.8 4.6 0.4 10.4 0.0 3.8 4 0 0 4 4 4 1 AAA domain TniB PF05621.11 gi|452210911|ref|YP_007491025.1| - 0.0011 18.4 4.2 0.83 9.0 0.1 4.3 4 1 0 4 4 4 1 Bacterial TniB protein DnaB_C PF03796.15 gi|452210911|ref|YP_007491025.1| - 0.0016 17.8 2.8 0.41 9.9 0.0 3.3 4 0 0 4 4 4 1 DnaB-like helicase C terminal domain PhoH PF02562.16 gi|452210911|ref|YP_007491025.1| - 0.0016 17.9 0.6 5 6.5 0.1 3.4 3 0 0 3 3 3 0 PhoH-like protein T2SSE PF00437.20 gi|452210911|ref|YP_007491025.1| - 0.0018 17.4 0.5 0.3 10.1 0.1 2.6 2 0 0 2 2 2 1 Type II/IV secretion system protein Rad17 PF03215.15 gi|452210911|ref|YP_007491025.1| - 0.0045 16.9 0.0 1.2 9.1 0.0 2.6 2 0 0 2 2 2 1 Rad17 P-loop domain AAA_18 PF13238.6 gi|452210911|ref|YP_007491025.1| - 0.0045 17.5 4.2 0.55 10.8 0.0 3.7 2 1 0 2 2 2 1 AAA domain PRK PF00485.18 gi|452210911|ref|YP_007491025.1| - 0.0045 16.7 0.3 1.5 8.5 0.0 3.1 4 0 0 4 4 2 1 Phosphoribulokinase / Uridine kinase family PduV-EutP PF10662.9 gi|452210911|ref|YP_007491025.1| - 0.0046 16.7 0.4 0.51 10.1 0.0 2.5 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation MobB PF03205.14 gi|452210911|ref|YP_007491025.1| - 0.0052 16.7 0.6 0.81 9.6 0.1 2.8 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B NTPase_1 PF03266.15 gi|452210911|ref|YP_007491025.1| - 0.0055 16.6 7.4 0.095 12.6 0.1 3.4 4 0 0 4 4 4 1 NTPase ABC_ATPase PF09818.9 gi|452210911|ref|YP_007491025.1| - 0.0071 15.2 10.3 1.2 7.9 0.2 4.1 4 1 0 4 4 4 2 Predicted ATPase of the ABC class AAA_13 PF13166.6 gi|452210911|ref|YP_007491025.1| - 0.0077 14.9 1.2 0.85 8.2 0.1 3.5 3 1 1 4 4 4 1 AAA domain G-alpha PF00503.20 gi|452210911|ref|YP_007491025.1| - 0.012 14.8 1.2 1.5 7.9 0.1 2.2 1 1 1 2 2 2 0 G-protein alpha subunit AAA_14 PF13173.6 gi|452210911|ref|YP_007491025.1| - 0.02 14.9 0.4 19 5.3 0.0 3.4 3 0 0 3 3 3 0 AAA domain AAA_28 PF13521.6 gi|452210911|ref|YP_007491025.1| - 0.021 15.1 1.5 0.97 9.7 0.1 2.9 3 0 0 3 3 2 0 AAA domain Zeta_toxin PF06414.12 gi|452210911|ref|YP_007491025.1| - 0.021 14.1 0.4 3.8 6.7 0.1 2.5 2 0 0 2 2 2 0 Zeta toxin DUF87 PF01935.17 gi|452210911|ref|YP_007491025.1| - 0.022 14.9 0.1 0.81 9.7 0.0 2.3 2 0 0 2 2 2 0 Helicase HerA, central domain Roc PF08477.13 gi|452210911|ref|YP_007491025.1| - 0.027 14.7 0.2 1.7 8.8 0.0 2.6 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase APS_kinase PF01583.20 gi|452210911|ref|YP_007491025.1| - 0.027 14.4 2.5 0.28 11.0 0.1 2.8 3 0 0 3 3 2 0 Adenylylsulphate kinase ATPase PF06745.13 gi|452210911|ref|YP_007491025.1| - 0.039 13.3 6.2 1.5 8.1 0.0 3.7 4 1 0 4 4 4 0 KaiC AAA_5 PF07728.14 gi|452210911|ref|YP_007491025.1| - 0.059 13.4 1.6 0.17 11.9 0.0 2.4 3 0 0 3 3 2 0 AAA domain (dynein-related subfamily) AAA_7 PF12775.7 gi|452210911|ref|YP_007491025.1| - 0.074 12.6 0.5 3.3 7.2 0.0 2.4 2 0 0 2 2 2 0 P-loop containing dynein motor region KTI12 PF08433.10 gi|452210911|ref|YP_007491025.1| - 0.078 12.4 0.5 14 5.0 0.0 2.8 3 0 0 3 3 2 0 Chromatin associated protein KTI12 Caps_synth PF05704.12 gi|452210911|ref|YP_007491025.1| - 0.17 11.2 0.0 0.27 10.6 0.0 1.3 1 0 0 1 1 1 0 Capsular polysaccharide synthesis protein MMR_HSR1 PF01926.23 gi|452210911|ref|YP_007491025.1| - 0.27 11.3 4.8 4.9 7.3 0.5 3.0 2 2 0 2 2 2 0 50S ribosome-binding GTPase CbiA PF01656.23 gi|452210911|ref|YP_007491025.1| - 0.28 11.2 2.1 6.1 6.9 0.5 2.8 2 0 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain DUF3732 PF12532.8 gi|452210911|ref|YP_007491025.1| - 0.29 10.7 1.1 0.81 9.2 0.3 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3732) ATPase_2 PF01637.18 gi|452210911|ref|YP_007491025.1| - 0.34 10.8 6.5 2.6 7.9 0.0 3.3 1 1 1 2 2 2 0 ATPase domain predominantly from Archaea ATP_bind_1 PF03029.17 gi|452210911|ref|YP_007491025.1| - 0.38 10.5 2.7 2.8 7.6 0.1 2.7 3 0 0 3 3 2 0 Conserved hypothetical ATP binding protein cobW PF02492.19 gi|452210911|ref|YP_007491025.1| - 3.7 7.1 6.2 1.7 8.2 0.1 2.9 4 0 0 4 4 3 0 CobW/HypB/UreG, nucleotide-binding domain AAA_19 PF13245.6 gi|452210911|ref|YP_007491025.1| - 4.2 7.7 7.9 3.7 7.9 0.1 3.5 3 1 0 3 3 3 0 AAA domain CbiQ PF02361.16 gi|452210912|ref|YP_007491026.1| - 8.8e-33 113.8 6.4 1.1e-32 113.4 6.4 1.1 1 0 0 1 1 1 1 Cobalt transport protein PD40 PF07676.12 gi|452210913|ref|YP_007491027.1| - 6e-25 86.6 31.5 3.3e-06 26.9 0.4 9.2 9 0 0 9 9 9 5 WD40-like Beta Propeller Repeat CARDB PF07705.11 gi|452210913|ref|YP_007491027.1| - 1e-23 83.5 0.8 1e-23 83.5 0.8 3.3 4 0 0 4 4 4 1 CARDB DPPIV_N PF00930.21 gi|452210913|ref|YP_007491027.1| - 3.3e-16 59.0 8.2 0.00014 20.7 0.1 5.7 2 1 3 5 5 5 4 Dipeptidyl peptidase IV (DPP IV) N-terminal region DUF5050 PF16472.5 gi|452210913|ref|YP_007491027.1| - 4.8e-07 29.3 2.5 0.00022 20.6 0.2 2.7 3 0 0 3 3 3 2 Domain of unknown function (DUF5050) Pectate_lyase22 PF14583.6 gi|452210913|ref|YP_007491027.1| - 3.2e-06 26.1 0.1 0.8 8.3 0.0 3.7 1 1 3 4 4 4 3 Oligogalacturonate lyase Gmad1 PF10647.9 gi|452210913|ref|YP_007491027.1| - 9.5e-05 22.3 0.0 0.31 10.8 0.0 2.7 1 1 0 2 2 2 2 Lipoprotein LpqB beta-propeller domain fn3 PF00041.21 gi|452210913|ref|YP_007491027.1| - 0.04 14.3 2.5 0.13 12.6 0.3 3.1 2 1 1 3 3 3 0 Fibronectin type III domain eIF2A PF08662.11 gi|452210913|ref|YP_007491027.1| - 0.12 12.3 0.1 1.4 8.8 0.0 2.7 2 1 0 2 2 2 0 Eukaryotic translation initiation factor eIF2A WD40 PF00400.32 gi|452210913|ref|YP_007491027.1| - 0.27 12.2 6.7 12 7.0 0.1 5.1 3 1 1 4 4 4 0 WD domain, G-beta repeat DUF3748 PF12566.8 gi|452210913|ref|YP_007491027.1| - 1.2 9.1 2.7 1.1e+02 2.7 0.0 4.3 5 0 0 5 5 5 0 Protein of unknown function (DUF3748) Proteasome_A_N PF10584.9 gi|452210913|ref|YP_007491027.1| - 4.2 7.2 8.9 13 5.6 0.0 5.0 5 0 0 5 5 5 0 Proteasome subunit A N-terminal signature Transposase_mut PF00872.18 gi|452210914|ref|YP_007491028.1| - 2.3e-68 230.8 1.0 3.4e-67 226.9 1.0 1.9 1 1 0 1 1 1 1 Transposase, Mutator family MULE PF10551.9 gi|452210914|ref|YP_007491028.1| - 1.7e-10 41.2 0.0 2.9e-10 40.4 0.0 1.4 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_ISL3 PF01610.17 gi|452210914|ref|YP_007491028.1| - 0.015 15.0 0.2 0.019 14.7 0.2 1.3 1 0 0 1 1 1 0 Transposase DDE_Tnp_IS240 PF13610.6 gi|452210914|ref|YP_007491028.1| - 0.033 14.4 0.9 0.79 10.0 0.7 2.5 1 1 1 2 2 2 0 DDE domain ANAPC4 PF12896.7 gi|452210914|ref|YP_007491028.1| - 0.07 12.6 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 4 DHQ_synthase PF01761.20 gi|452210914|ref|YP_007491028.1| - 0.088 11.9 0.0 0.13 11.4 0.0 1.3 1 0 0 1 1 1 0 3-dehydroquinate synthase Relaxase PF03432.14 gi|452210914|ref|YP_007491028.1| - 0.14 11.7 1.8 6 6.4 1.4 2.1 1 1 1 2 2 2 0 Relaxase/Mobilisation nuclease domain Dynein_light PF01221.18 gi|452210914|ref|YP_007491028.1| - 0.16 12.3 1.3 0.35 11.2 0.6 1.9 2 0 0 2 2 2 0 Dynein light chain type 1 DUF2769 PF10967.8 gi|452210915|ref|YP_007491029.1| - 3.1e-09 37.3 14.2 3.1e-09 37.3 14.2 2.3 2 0 0 2 2 2 1 Protein of unknown function (DUF2769) AMP-binding PF00501.28 gi|452210916|ref|YP_007491030.1| - 8.9e-112 373.8 0.0 1.1e-111 373.5 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|452210916|ref|YP_007491030.1| - 2.2e-19 70.2 0.1 4.4e-19 69.2 0.1 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain 4HBT PF03061.22 gi|452210917|ref|YP_007491031.1| - 8.5e-09 35.7 0.0 1.7e-08 34.7 0.0 1.5 1 1 0 1 1 1 1 Thioesterase superfamily 4HBT_2 PF13279.6 gi|452210917|ref|YP_007491031.1| - 2.5e-08 34.4 0.0 3.3e-08 34.1 0.0 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily Acyl-ACP_TE PF01643.17 gi|452210917|ref|YP_007491031.1| - 0.0012 18.2 0.0 0.049 12.9 0.0 2.0 2 0 0 2 2 2 2 Acyl-ACP thioesterase LSPR PF06049.12 gi|452210917|ref|YP_007491031.1| - 1.4 9.1 4.0 39 4.7 0.0 3.4 3 0 0 3 3 3 0 Coagulation Factor V LSPD Repeat Cupin_2 PF07883.11 gi|452210918|ref|YP_007491032.1| - 4.4e-16 58.4 0.6 6.8e-16 57.7 0.6 1.2 1 0 0 1 1 1 1 Cupin domain HTH_3 PF01381.22 gi|452210918|ref|YP_007491032.1| - 6.8e-11 42.1 0.3 9.8e-11 41.6 0.3 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|452210918|ref|YP_007491032.1| - 1.8e-10 41.0 0.6 3.1e-10 40.3 0.6 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|452210918|ref|YP_007491032.1| - 5.7e-07 29.9 0.0 9.2e-07 29.2 0.0 1.4 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_19 PF12844.7 gi|452210918|ref|YP_007491032.1| - 1.1e-06 28.5 0.0 2e-06 27.7 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain AraC_binding PF02311.19 gi|452210918|ref|YP_007491032.1| - 0.00011 22.1 1.0 0.00014 21.8 0.2 1.6 2 0 0 2 2 2 1 AraC-like ligand binding domain Cupin_3 PF05899.12 gi|452210918|ref|YP_007491032.1| - 0.00038 20.1 0.0 0.00061 19.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF861) HTH_25 PF13413.6 gi|452210918|ref|YP_007491032.1| - 0.0014 18.4 1.3 0.0028 17.5 1.4 1.5 1 1 0 1 1 1 1 Helix-turn-helix domain MannoseP_isomer PF01050.18 gi|452210918|ref|YP_007491032.1| - 0.035 14.0 0.0 0.052 13.4 0.0 1.2 1 0 0 1 1 1 0 Mannose-6-phosphate isomerase Oxidored_FMN PF00724.20 gi|452210919|ref|YP_007491033.1| - 2.8e-70 237.3 0.0 3.3e-70 237.0 0.0 1.0 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family His_biosynth PF00977.21 gi|452210919|ref|YP_007491033.1| - 0.00019 21.0 0.0 0.0005 19.6 0.0 1.7 1 1 0 1 1 1 1 Histidine biosynthesis protein Dus PF01207.17 gi|452210919|ref|YP_007491033.1| - 0.00023 20.4 0.0 0.0004 19.6 0.0 1.4 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) NMO PF03060.15 gi|452210919|ref|YP_007491033.1| - 0.016 14.6 0.1 0.027 13.9 0.1 1.3 1 0 0 1 1 1 0 Nitronate monooxygenase TA_inhibitor PF17574.2 gi|452210919|ref|YP_007491033.1| - 0.031 14.3 0.1 6.5 6.9 0.0 2.4 2 0 0 2 2 2 0 Inhibitor of toxin/antitoxin system (Gp4.5) Cytochrom_C_asm PF01578.20 gi|452210920|ref|YP_007491034.1| - 8.2e-28 97.6 12.8 8.2e-28 97.6 12.8 1.9 2 0 0 2 2 2 1 Cytochrome C assembly protein DUF2681 PF10883.8 gi|452210920|ref|YP_007491034.1| - 0.76 10.2 0.1 0.76 10.2 0.1 3.3 4 1 1 5 5 5 0 Protein of unknown function (DUF2681) CcmB PF03379.13 gi|452210921|ref|YP_007491035.1| - 3.2e-36 124.9 15.3 3.8e-36 124.6 15.3 1.0 1 0 0 1 1 1 1 CcmB protein ABC2_membrane PF01061.24 gi|452210921|ref|YP_007491035.1| - 3e-13 49.7 14.9 4.6e-13 49.1 14.9 1.2 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_2 PF12679.7 gi|452210921|ref|YP_007491035.1| - 3.5e-09 36.4 19.1 2.6e-08 33.5 19.1 2.0 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 gi|452210921|ref|YP_007491035.1| - 4e-08 32.8 15.8 4e-08 32.8 15.8 1.9 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|452210921|ref|YP_007491035.1| - 0.0001 22.3 15.8 0.00041 20.4 15.8 1.9 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.6 gi|452210921|ref|YP_007491035.1| - 0.022 14.3 17.1 0.039 13.5 17.1 1.5 1 1 0 1 1 1 0 ABC-2 family transporter protein ABC_tran PF00005.27 gi|452210922|ref|YP_007491036.1| - 7.2e-33 114.0 0.0 8.4e-33 113.8 0.0 1.0 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|452210922|ref|YP_007491036.1| - 1.9e-10 41.0 1.9 1.4e-05 25.1 0.4 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|452210922|ref|YP_007491036.1| - 1.5e-06 28.9 0.7 2.3e-06 28.2 0.7 1.4 1 1 0 1 1 1 1 AAA domain AAA_27 PF13514.6 gi|452210922|ref|YP_007491036.1| - 2.1e-06 27.5 0.2 0.00033 20.3 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_13 PF13166.6 gi|452210922|ref|YP_007491036.1| - 0.00021 20.1 0.0 0.00022 20.0 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|452210922|ref|YP_007491036.1| - 0.00025 20.7 0.1 0.0004 20.1 0.1 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain ATPase_2 PF01637.18 gi|452210922|ref|YP_007491036.1| - 0.00029 20.8 0.0 0.00032 20.7 0.0 1.2 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_22 PF13401.6 gi|452210922|ref|YP_007491036.1| - 0.0012 19.2 0.3 0.0048 17.2 0.3 1.9 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|452210922|ref|YP_007491036.1| - 0.0016 18.3 0.2 0.0027 17.5 0.2 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 gi|452210922|ref|YP_007491036.1| - 0.0028 18.1 0.1 0.013 15.9 0.1 1.9 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 gi|452210922|ref|YP_007491036.1| - 0.0042 16.8 0.1 0.0075 16.0 0.1 1.6 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|452210922|ref|YP_007491036.1| - 0.011 16.1 0.1 0.019 15.4 0.1 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA_25 PF13481.6 gi|452210922|ref|YP_007491036.1| - 0.012 15.2 0.0 0.019 14.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|452210922|ref|YP_007491036.1| - 0.014 15.2 0.0 0.023 14.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 gi|452210922|ref|YP_007491036.1| - 0.017 15.0 0.1 0.024 14.5 0.1 1.3 1 1 0 1 1 1 0 NTPase Rad17 PF03215.15 gi|452210922|ref|YP_007491036.1| - 0.019 14.9 0.0 0.023 14.6 0.0 1.1 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_28 PF13521.6 gi|452210922|ref|YP_007491036.1| - 0.02 15.2 0.0 0.022 15.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain SMC_N PF02463.19 gi|452210922|ref|YP_007491036.1| - 0.022 14.2 0.0 0.052 13.0 0.0 1.5 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|452210922|ref|YP_007491036.1| - 0.024 14.5 0.1 0.038 13.9 0.1 1.3 1 0 0 1 1 1 0 RsgA GTPase TsaE PF02367.17 gi|452210922|ref|YP_007491036.1| - 0.066 13.2 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE cobW PF02492.19 gi|452210922|ref|YP_007491036.1| - 0.07 12.7 0.0 0.13 11.9 0.0 1.4 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Adeno_IVa2 PF02456.15 gi|452210922|ref|YP_007491036.1| - 0.087 11.6 0.0 0.11 11.3 0.0 1.2 1 0 0 1 1 1 0 Adenovirus IVa2 protein NB-ARC PF00931.22 gi|452210922|ref|YP_007491036.1| - 0.091 11.9 0.0 0.21 10.8 0.0 1.6 1 1 0 1 1 1 0 NB-ARC domain AAA_14 PF13173.6 gi|452210922|ref|YP_007491036.1| - 0.1 12.7 0.0 0.13 12.3 0.0 1.5 1 1 0 1 1 1 0 AAA domain DUF3584 PF12128.8 gi|452210922|ref|YP_007491036.1| - 0.11 10.0 0.0 0.15 9.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) NACHT PF05729.12 gi|452210922|ref|YP_007491036.1| - 0.11 12.4 0.3 0.21 11.5 0.1 1.6 1 1 1 2 2 2 0 NACHT domain AAA_18 PF13238.6 gi|452210922|ref|YP_007491036.1| - 0.11 13.0 0.2 0.2 12.2 0.2 1.6 1 1 0 1 1 1 0 AAA domain ATP-synt_ab PF00006.25 gi|452210922|ref|YP_007491036.1| - 0.15 11.7 0.0 0.18 11.5 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain PMSR PF01625.21 gi|452210924|ref|YP_007491038.1| - 5.6e-66 221.4 0.6 7.2e-66 221.1 0.6 1.1 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase PBP PF01161.20 gi|452210925|ref|YP_007491039.1| - 4.8e-33 114.3 0.0 6.1e-33 114.0 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylethanolamine-binding protein YhfH PF14149.6 gi|452210926|ref|YP_007491040.1| - 0.0083 16.1 0.3 0.0083 16.1 0.3 2.2 1 1 1 2 2 2 1 YhfH-like protein DZR PF12773.7 gi|452210926|ref|YP_007491040.1| - 0.036 14.1 1.8 0.067 13.2 1.8 1.4 1 1 0 1 1 1 0 Double zinc ribbon zf-B_box PF00643.24 gi|452210926|ref|YP_007491040.1| - 0.058 13.6 1.6 0.079 13.1 1.6 1.2 1 0 0 1 1 1 0 B-box zinc finger PolC_DP2 PF03833.13 gi|452210926|ref|YP_007491040.1| - 0.075 10.9 0.4 0.063 11.1 0.4 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 Zn-ribbon_8 PF09723.10 gi|452210926|ref|YP_007491040.1| - 0.11 12.7 4.2 2.3 8.4 0.1 2.4 1 1 1 2 2 2 0 Zinc ribbon domain DUF2256 PF10013.9 gi|452210926|ref|YP_007491040.1| - 0.31 11.2 3.4 0.49 10.6 0.3 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) zinc_ribbon_2 PF13240.6 gi|452210926|ref|YP_007491040.1| - 0.92 9.3 6.4 2.5 7.9 6.4 1.7 1 1 0 1 1 1 0 zinc-ribbon domain NRDD PF13597.6 gi|452210926|ref|YP_007491040.1| - 1.1 7.9 3.2 1.4 7.7 3.2 1.0 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase DUF362 PF04015.12 gi|452210927|ref|YP_007491041.1| - 8.9e-33 114.2 0.0 1.1e-32 113.9 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF362) MazE_antitoxin PF04014.18 gi|452210927|ref|YP_007491041.1| - 0.1 12.5 0.0 0.24 11.4 0.0 1.6 1 0 0 1 1 1 0 Antidote-toxin recognition MazE, bacterial antitoxin TrkA_C PF02080.21 gi|452210928|ref|YP_007491042.1| - 4.5e-26 90.5 0.1 1.5e-12 47.2 0.0 2.5 2 0 0 2 2 2 2 TrkA-C domain PhoU PF01895.19 gi|452210928|ref|YP_007491042.1| - 3.2e-19 69.2 16.8 2.9e-11 43.7 6.4 2.8 2 1 1 3 3 3 2 PhoU domain DUF4363 PF14276.6 gi|452210928|ref|YP_007491042.1| - 0.22 11.7 2.2 0.24 11.5 0.4 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4363) MgtE PF01769.16 gi|452210929|ref|YP_007491043.1| - 2.9e-19 69.7 11.0 2.9e-19 69.7 11.0 1.6 2 0 0 2 2 2 1 Divalent cation transporter DUF485 PF04341.12 gi|452210929|ref|YP_007491043.1| - 0.92 9.5 6.5 2.3 8.2 6.5 1.7 1 0 0 1 1 1 0 Protein of unknown function, DUF485 MgtE PF01769.16 gi|452210930|ref|YP_007491044.1| - 7.4e-20 71.6 9.9 7.4e-20 71.6 9.9 1.7 2 0 0 2 2 2 1 Divalent cation transporter CRCB PF02537.15 gi|452210930|ref|YP_007491044.1| - 0.21 11.9 7.6 0.47 10.8 7.7 1.7 1 1 0 1 1 1 0 CrcB-like protein, Camphor Resistance (CrcB) DUF4118 PF13493.6 gi|452210930|ref|YP_007491044.1| - 3 7.7 16.4 1.4 8.8 13.5 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4118) Spore_YhaL PF14147.6 gi|452210933|ref|YP_007491047.1| - 0.15 11.7 0.1 2.3 8.0 0.0 2.2 2 0 0 2 2 2 0 Sporulation protein YhaL Reprolysin_5 PF13688.6 gi|452210934|ref|YP_007491048.1| - 9e-22 78.2 10.1 1.5e-21 77.4 10.1 1.3 1 0 0 1 1 1 1 Metallo-peptidase family M12 SWI2_SNF2 PF18766.1 gi|452210934|ref|YP_007491048.1| - 0.0052 16.5 0.5 0.0083 15.8 0.5 1.3 1 0 0 1 1 1 1 SWI2/SNF2 ATPase Reprolysin_3 PF13582.6 gi|452210934|ref|YP_007491048.1| - 0.0055 17.2 3.4 0.0055 17.2 3.4 2.1 2 1 0 2 2 2 1 Metallo-peptidase family M12B Reprolysin-like KorB PF08535.10 gi|452210934|ref|YP_007491048.1| - 0.11 12.5 0.1 0.23 11.5 0.1 1.5 1 0 0 1 1 1 0 KorB domain O-antigen_lig PF13425.6 gi|452210934|ref|YP_007491048.1| - 0.14 10.9 1.1 0.19 10.5 1.1 1.2 1 0 0 1 1 1 0 O-antigen ligase like membrane protein DUF948 PF06103.11 gi|452210935|ref|YP_007491049.1| - 0.021 15.0 0.3 0.032 14.5 0.3 1.3 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DUF5347 PF17282.2 gi|452210935|ref|YP_007491049.1| - 0.14 12.5 1.0 0.19 12.0 0.3 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF5347) Col_cuticle_N PF01484.17 gi|452210935|ref|YP_007491049.1| - 0.81 9.8 4.2 1.4 9.1 4.2 1.3 1 0 0 1 1 1 0 Nematode cuticle collagen N-terminal domain AsnC_trans_reg PF01037.21 gi|452210938|ref|YP_007491052.1| - 6.4e-11 42.1 0.2 6.7e-11 42.0 0.2 1.0 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain GYD PF08734.11 gi|452210938|ref|YP_007491052.1| - 6e-06 26.1 0.0 6.6e-06 26.0 0.0 1.1 1 0 0 1 1 1 1 GYD domain ACT_4 PF13291.6 gi|452210938|ref|YP_007491052.1| - 0.018 15.6 0.1 0.53 10.9 0.1 2.0 2 0 0 2 2 2 0 ACT domain MIase PF02426.16 gi|452210938|ref|YP_007491052.1| - 0.11 12.6 0.0 0.13 12.5 0.0 1.2 1 0 0 1 1 1 0 Muconolactone delta-isomerase Topo-VIb_trans PF09239.11 gi|452210941|ref|YP_007491055.1| - 2.4e-66 222.5 0.0 3.8e-66 221.8 0.0 1.3 1 0 0 1 1 1 1 Topoisomerase VI B subunit, transducer Top6b_C PF18000.1 gi|452210941|ref|YP_007491055.1| - 1.1e-46 157.7 0.1 1.9e-46 156.9 0.1 1.5 1 0 0 1 1 1 1 Type 2 DNA topoisomerase 6 subunit B C-terminal domain HATPase_c PF02518.26 gi|452210941|ref|YP_007491055.1| - 5.1e-11 43.1 0.0 1.9e-10 41.2 0.0 1.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 gi|452210941|ref|YP_007491055.1| - 2.6e-07 30.5 0.0 6.1e-07 29.3 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MAF_flag10 PF01973.18 gi|452210941|ref|YP_007491055.1| - 0.016 14.9 0.0 0.037 13.7 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function DUF115 FbpA PF05833.11 gi|452210941|ref|YP_007491055.1| - 0.017 13.9 0.7 0.025 13.3 0.0 1.6 2 0 0 2 2 2 0 Fibronectin-binding protein A N-terminus (FbpA) HATPase_c_5 PF14501.6 gi|452210941|ref|YP_007491055.1| - 0.09 12.7 0.0 0.21 11.5 0.0 1.6 1 0 0 1 1 1 0 GHKL domain TP6A_N PF04406.14 gi|452210942|ref|YP_007491056.1| - 3.1e-14 52.7 0.3 7e-14 51.6 0.3 1.6 1 0 0 1 1 1 1 Type IIB DNA topoisomerase BtpA PF03437.15 gi|452210942|ref|YP_007491056.1| - 0.17 11.3 0.0 0.25 10.8 0.0 1.2 1 0 0 1 1 1 0 BtpA family DNA_gyraseB PF00204.25 gi|452210943|ref|YP_007491057.1| - 2.1e-64 216.2 1.0 3.2e-64 215.6 1.0 1.3 1 0 0 1 1 1 1 DNA gyrase B DNA_gyraseB_C PF00986.21 gi|452210943|ref|YP_007491057.1| - 2.6e-31 107.6 0.1 6.1e-31 106.4 0.1 1.7 1 0 0 1 1 1 1 DNA gyrase B subunit, carboxyl terminus HATPase_c PF02518.26 gi|452210943|ref|YP_007491057.1| - 2.7e-21 76.2 0.1 6.4e-21 75.0 0.1 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toprim PF01751.22 gi|452210943|ref|YP_007491057.1| - 1.6e-18 66.9 0.0 4.2e-18 65.5 0.0 1.8 1 0 0 1 1 1 1 Toprim domain HATPase_c_3 PF13589.6 gi|452210943|ref|YP_007491057.1| - 0.0025 17.6 0.2 0.0078 16.0 0.0 1.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNA_topoisoIV PF00521.20 gi|452210944|ref|YP_007491058.1| - 2e-159 531.1 0.7 3.1e-159 530.5 0.7 1.3 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A DNA_gyraseA_C PF03989.13 gi|452210944|ref|YP_007491058.1| - 1.6e-76 251.6 13.1 1.2e-14 53.4 0.1 6.6 6 0 0 6 6 6 6 DNA gyrase C-terminal domain, beta-propeller HATPase_c_3 PF13589.6 gi|452210945|ref|YP_007491059.1| - 2.1e-12 47.0 0.0 4.9e-12 45.8 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 gi|452210945|ref|YP_007491059.1| - 7.5e-09 36.1 0.0 6.3e-08 33.1 0.0 2.4 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HD PF01966.22 gi|452210945|ref|YP_007491059.1| - 0.0039 17.4 2.0 0.021 15.0 1.0 2.8 2 1 0 2 2 2 1 HD domain PDEase_I PF00233.19 gi|452210945|ref|YP_007491059.1| - 0.0082 15.9 1.2 0.013 15.2 0.1 1.9 2 0 0 2 2 2 1 3'5'-cyclic nucleotide phosphodiesterase YqaH PF17448.2 gi|452210945|ref|YP_007491059.1| - 0.028 14.7 0.1 0.12 12.7 0.1 2.1 1 0 0 1 1 1 0 Uncharacterized YqaH-like YdjM PF04307.14 gi|452210946|ref|YP_007491060.1| - 1.1e-18 67.1 7.6 1.5e-18 66.7 7.6 1.2 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase Sod_Fe_C PF02777.18 gi|452210947|ref|YP_007491061.1| - 2.7e-33 114.2 0.1 5.2e-33 113.3 0.1 1.4 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.22 gi|452210947|ref|YP_007491061.1| - 3.6e-27 94.7 1.5 6.1e-27 93.9 1.5 1.4 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, alpha-hairpin domain YdjM PF04307.14 gi|452210948|ref|YP_007491062.1| - 5.7e-20 71.3 4.9 3.4e-19 68.8 4.9 2.0 1 1 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase DUF4184 PF13803.6 gi|452210948|ref|YP_007491062.1| - 0.028 14.1 0.6 0.052 13.2 0.6 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4184) YdjM PF04307.14 gi|452210950|ref|YP_007491064.1| - 1.5e-20 73.2 5.9 2.1e-20 72.7 5.9 1.2 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase DLH PF01738.18 gi|452210951|ref|YP_007491065.1| - 1.2e-33 116.6 0.0 2.6e-24 86.0 0.0 2.1 1 1 1 2 2 2 2 Dienelactone hydrolase family Peptidase_S9 PF00326.21 gi|452210951|ref|YP_007491065.1| - 1.6e-10 40.8 0.0 3.6e-06 26.6 0.0 2.5 1 1 1 2 2 2 2 Prolyl oligopeptidase family Chlorophyllase2 PF12740.7 gi|452210951|ref|YP_007491065.1| - 5.8e-09 35.2 0.0 8.3e-09 34.7 0.0 1.2 1 0 0 1 1 1 1 Chlorophyllase enzyme Chlorophyllase PF07224.11 gi|452210951|ref|YP_007491065.1| - 6.8e-09 35.2 0.0 1.1e-08 34.5 0.0 1.3 1 0 0 1 1 1 1 Chlorophyllase Hydrolase_4 PF12146.8 gi|452210951|ref|YP_007491065.1| - 2.7e-05 23.5 0.0 0.067 12.4 0.0 2.1 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_3 PF07859.13 gi|452210951|ref|YP_007491065.1| - 0.0029 17.5 0.0 0.22 11.3 0.0 2.4 1 1 1 2 2 2 1 alpha/beta hydrolase fold PAF-AH_p_II PF03403.13 gi|452210951|ref|YP_007491065.1| - 0.0037 15.8 0.0 0.064 11.8 0.0 2.0 1 1 1 2 2 2 1 Platelet-activating factor acetylhydrolase, isoform II Abhydrolase_1 PF00561.20 gi|452210951|ref|YP_007491065.1| - 0.0094 15.6 0.0 0.82 9.3 0.0 2.2 1 1 1 2 2 2 1 alpha/beta hydrolase fold BAAT_C PF08840.11 gi|452210951|ref|YP_007491065.1| - 0.027 14.4 0.0 0.12 12.3 0.0 1.8 1 1 2 3 3 3 0 BAAT / Acyl-CoA thioester hydrolase C terminal Abhydrolase_6 PF12697.7 gi|452210951|ref|YP_007491065.1| - 0.094 13.3 0.0 0.13 12.8 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase family URO-D PF01208.17 gi|452210953|ref|YP_007491067.1| - 8.5e-66 222.5 0.0 9.6e-66 222.3 0.0 1.0 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) B12-binding PF02310.19 gi|452210954|ref|YP_007491068.1| - 2.5e-18 66.3 0.5 4.1e-18 65.6 0.5 1.4 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|452210954|ref|YP_007491068.1| - 1.5e-10 41.3 0.1 5.1e-10 39.7 0.0 2.0 2 0 0 2 2 2 1 B12 binding domain UPF0180 PF03698.13 gi|452210954|ref|YP_007491068.1| - 0.073 13.2 0.1 0.17 12.1 0.1 1.7 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0180) DUF563 PF04577.14 gi|452210954|ref|YP_007491068.1| - 0.24 11.5 0.0 0.37 10.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF563) zf-IS66 PF13005.7 gi|452210955|ref|YP_007491069.1| - 5.3e-11 42.7 6.7 8.3e-11 42.1 6.7 1.3 1 0 0 1 1 1 1 zinc-finger binding domain of transposase IS66 zf-ISL3 PF14690.6 gi|452210955|ref|YP_007491069.1| - 0.0044 17.7 1.6 2 9.1 0.2 2.2 2 0 0 2 2 2 2 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zinc_ribbon_15 PF17032.5 gi|452210955|ref|YP_007491069.1| - 0.0048 17.6 1.9 0.0057 17.4 1.9 1.1 1 0 0 1 1 1 1 zinc-ribbon family OrfB_Zn_ribbon PF07282.11 gi|452210955|ref|YP_007491069.1| - 0.24 11.3 3.1 1.8 8.6 0.1 2.2 2 0 0 2 2 2 0 Putative transposase DNA-binding domain Mut7-C PF01927.16 gi|452210955|ref|YP_007491069.1| - 0.57 10.3 3.8 0.71 10.0 3.8 1.1 1 0 0 1 1 1 0 Mut7-C RNAse domain Zn-ribbon_8 PF09723.10 gi|452210955|ref|YP_007491069.1| - 5.8 7.1 10.0 3.4e+02 1.4 9.9 2.2 1 1 0 1 1 1 0 Zinc ribbon domain SOR_SNZ PF01680.17 gi|452210957|ref|YP_007491071.1| - 1.1e-104 348.7 8.8 1.3e-104 348.5 8.8 1.0 1 0 0 1 1 1 1 SOR/SNZ family ABC_sub_bind PF04392.12 gi|452210957|ref|YP_007491071.1| - 0.0033 16.7 0.3 0.0087 15.3 0.0 1.7 2 0 0 2 2 2 1 ABC transporter substrate binding protein ThiG PF05690.14 gi|452210957|ref|YP_007491071.1| - 0.011 15.1 2.1 0.011 15.1 2.1 1.6 2 1 0 2 2 2 0 Thiazole biosynthesis protein ThiG Cucumopine_C PF18631.1 gi|452210957|ref|YP_007491071.1| - 0.011 15.7 0.0 0.019 14.9 0.0 1.4 1 0 0 1 1 1 0 Cucumopine synthase C-terminal helical bundle domain MCM_lid PF17855.1 gi|452210957|ref|YP_007491071.1| - 0.051 14.0 0.4 4.9 7.6 0.0 2.8 2 1 1 3 3 3 0 MCM AAA-lid domain SNO PF01174.19 gi|452210958|ref|YP_007491072.1| - 9.5e-54 182.1 0.0 1.1e-53 181.9 0.0 1.0 1 0 0 1 1 1 1 SNO glutamine amidotransferase family GATase_3 PF07685.14 gi|452210958|ref|YP_007491072.1| - 2.2e-11 43.7 0.0 2.6e-11 43.5 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase PF00117.28 gi|452210958|ref|YP_007491072.1| - 2.7e-10 40.3 0.0 1.1e-08 35.0 0.0 2.1 2 0 0 2 2 2 1 Glutamine amidotransferase class-I Peptidase_S51 PF03575.17 gi|452210958|ref|YP_007491072.1| - 1.2e-09 38.2 0.0 1.5e-09 37.8 0.0 1.1 1 0 0 1 1 1 1 Peptidase family S51 BPL_N PF09825.9 gi|452210958|ref|YP_007491072.1| - 0.0016 17.6 0.0 0.0023 17.1 0.0 1.3 1 0 0 1 1 1 1 Biotin-protein ligase, N terminal DJ-1_PfpI PF01965.24 gi|452210958|ref|YP_007491072.1| - 0.01 15.6 1.1 0.021 14.7 0.6 1.5 1 1 1 2 2 2 0 DJ-1/PfpI family Peptidase_C26 PF07722.13 gi|452210958|ref|YP_007491072.1| - 0.063 13.0 0.1 0.38 10.5 0.2 2.3 2 1 0 2 2 2 0 Peptidase C26 DDE_Tnp_IS66 PF03050.14 gi|452210959|ref|YP_007491073.1| - 3.7e-63 213.6 0.5 4.9e-63 213.2 0.5 1.2 1 0 0 1 1 1 1 Transposase IS66 family DDE_Tnp_IS240 PF13610.6 gi|452210959|ref|YP_007491073.1| - 4.8e-07 30.1 2.1 0.032 14.4 0.0 3.1 2 1 1 3 3 3 2 DDE domain DUF725 PF05267.12 gi|452210959|ref|YP_007491073.1| - 0.073 13.1 0.9 0.16 12.0 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF725) Cnn_1N PF07989.11 gi|452210959|ref|YP_007491073.1| - 4.6 7.5 8.7 16 5.7 2.2 2.5 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 Putative_PNPOx PF01243.20 gi|452210960|ref|YP_007491074.1| - 1.7e-15 57.0 0.0 2e-15 56.7 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_ox_like PF16242.5 gi|452210960|ref|YP_007491074.1| - 0.069 12.7 0.0 0.092 12.3 0.0 1.1 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase like PKD_3 PF16820.5 gi|452210961|ref|YP_007491075.1| - 0.0027 17.4 1.8 1.2 9.0 0.0 3.1 2 1 1 3 3 3 1 PKD-like domain DUF2957 PF11170.8 gi|452210961|ref|YP_007491075.1| - 0.015 14.1 0.1 0.021 13.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2957) DUF3139 PF11337.8 gi|452210961|ref|YP_007491075.1| - 0.11 13.1 0.1 0.18 12.4 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3139) PPC PF04151.15 gi|452210961|ref|YP_007491075.1| - 0.13 13.3 0.7 0.13 13.3 0.7 1.9 1 1 1 2 2 2 0 Bacterial pre-peptidase C-terminal domain SNARE PF05739.19 gi|452210961|ref|YP_007491075.1| - 0.48 10.5 2.1 2.9 8.0 3.3 1.7 2 0 0 2 2 2 0 SNARE domain HTH_24 PF13412.6 gi|452210962|ref|YP_007491076.1| - 2.8e-19 68.4 0.4 8.8e-10 38.0 0.6 2.5 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|452210962|ref|YP_007491076.1| - 1.9e-11 43.9 0.0 1.7e-05 24.8 0.0 2.3 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_5 PF01022.20 gi|452210962|ref|YP_007491076.1| - 6.2e-10 38.8 0.0 0.001 18.9 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 gi|452210962|ref|YP_007491076.1| - 8e-09 35.3 0.1 0.00069 19.5 0.2 2.4 2 0 0 2 2 2 2 HTH domain MarR PF01047.22 gi|452210962|ref|YP_007491076.1| - 1.4e-06 28.1 0.0 0.028 14.3 0.0 2.8 3 0 0 3 3 2 2 MarR family HTH_Crp_2 PF13545.6 gi|452210962|ref|YP_007491076.1| - 5.7e-06 26.2 0.0 0.0013 18.7 0.0 2.4 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_36 PF13730.6 gi|452210962|ref|YP_007491076.1| - 5.9e-06 26.1 0.4 0.14 12.2 0.0 3.2 3 0 0 3 3 3 2 Helix-turn-helix domain HTH_38 PF13936.6 gi|452210962|ref|YP_007491076.1| - 1.2e-05 25.0 0.2 0.049 13.4 0.2 2.4 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_34 PF13601.6 gi|452210962|ref|YP_007491076.1| - 2.4e-05 24.4 0.1 0.032 14.4 0.0 2.4 2 0 0 2 2 2 2 Winged helix DNA-binding domain GerE PF00196.19 gi|452210962|ref|YP_007491076.1| - 3.3e-05 23.3 0.2 0.17 11.4 0.1 2.7 2 0 0 2 2 2 2 Bacterial regulatory proteins, luxR family HTH_41 PF14502.6 gi|452210962|ref|YP_007491076.1| - 3.7e-05 23.3 0.0 0.028 14.1 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain TrmB PF01978.19 gi|452210962|ref|YP_007491076.1| - 3.8e-05 23.5 0.1 0.0024 17.7 0.0 2.5 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB FaeA PF04703.12 gi|452210962|ref|YP_007491076.1| - 4e-05 23.9 0.3 0.41 11.1 0.0 2.3 2 0 0 2 2 2 2 FaeA-like protein HTH_28 PF13518.6 gi|452210962|ref|YP_007491076.1| - 5.9e-05 23.1 0.0 0.061 13.5 0.0 2.3 2 0 0 2 2 2 2 Helix-turn-helix domain MarR_2 PF12802.7 gi|452210962|ref|YP_007491076.1| - 5.9e-05 22.9 0.0 0.43 10.5 0.0 2.3 2 0 0 2 2 2 2 MarR family Penicillinase_R PF03965.16 gi|452210962|ref|YP_007491076.1| - 6.4e-05 23.3 0.2 0.034 14.5 0.0 2.3 1 1 1 2 2 2 1 Penicillinase repressor HTH_IclR PF09339.10 gi|452210962|ref|YP_007491076.1| - 8e-05 22.4 0.0 0.14 12.0 0.0 2.5 3 0 0 3 3 2 2 IclR helix-turn-helix domain HrcA_DNA-bdg PF03444.15 gi|452210962|ref|YP_007491076.1| - 0.00028 20.4 0.2 0.9 9.2 0.0 2.6 2 0 0 2 2 2 2 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Sigma70_r4 PF04545.16 gi|452210962|ref|YP_007491076.1| - 0.00038 19.9 0.0 1.1 8.8 0.0 3.0 2 1 1 3 3 3 2 Sigma-70, region 4 TetR_N PF00440.23 gi|452210962|ref|YP_007491076.1| - 0.00064 19.5 0.0 0.23 11.3 0.0 2.6 2 0 0 2 2 2 1 Bacterial regulatory proteins, tetR family Sigma70_r4_2 PF08281.12 gi|452210962|ref|YP_007491076.1| - 0.0013 18.3 0.0 0.12 12.1 0.0 2.4 2 0 0 2 2 2 1 Sigma-70, region 4 MerR_1 PF13411.6 gi|452210962|ref|YP_007491076.1| - 0.0025 17.9 0.3 0.46 10.6 0.1 2.3 2 0 0 2 2 2 1 MerR HTH family regulatory protein NUMOD1 PF07453.13 gi|452210962|ref|YP_007491076.1| - 0.0063 16.7 2.0 4.1 7.8 0.0 3.5 3 1 0 3 3 3 1 NUMOD1 domain HTH_AsnC-type PF13404.6 gi|452210962|ref|YP_007491076.1| - 0.0064 16.3 0.0 0.79 9.6 0.0 2.4 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain RepL PF05732.11 gi|452210962|ref|YP_007491076.1| - 0.0072 15.8 0.5 0.049 13.1 0.1 2.1 1 1 0 2 2 2 1 Firmicute plasmid replication protein (RepL) HTH_10 PF04967.12 gi|452210962|ref|YP_007491076.1| - 0.0073 16.1 0.0 2.5 8.0 0.0 2.5 2 0 0 2 2 2 1 HTH DNA binding domain GntR PF00392.21 gi|452210962|ref|YP_007491076.1| - 0.014 15.1 0.0 0.46 10.2 0.0 2.4 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family Fe_dep_repress PF01325.19 gi|452210962|ref|YP_007491076.1| - 0.014 15.6 0.0 1.4 9.2 0.0 2.4 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain HTH_17 PF12728.7 gi|452210962|ref|YP_007491076.1| - 0.016 15.4 0.3 3.4 7.9 0.1 2.7 3 0 0 3 3 2 0 Helix-turn-helix domain Mrr_N PF14338.6 gi|452210962|ref|YP_007491076.1| - 0.023 14.8 0.1 0.061 13.5 0.1 1.7 1 0 0 1 1 1 0 Mrr N-terminal domain HTH_3 PF01381.22 gi|452210962|ref|YP_007491076.1| - 0.029 14.4 0.1 0.11 12.5 0.0 2.0 2 1 1 3 3 1 0 Helix-turn-helix HTH_29 PF13551.6 gi|452210962|ref|YP_007491076.1| - 0.043 13.8 0.0 3.8 7.6 0.0 2.4 2 0 0 2 2 2 0 Winged helix-turn helix HTH_23 PF13384.6 gi|452210962|ref|YP_007491076.1| - 0.056 13.2 0.0 13 5.7 0.0 2.4 2 0 0 2 2 2 0 Homeodomain-like domain HTH_45 PF14947.6 gi|452210962|ref|YP_007491076.1| - 0.061 13.3 2.8 0.58 10.2 0.1 2.8 2 1 1 3 3 3 0 Winged helix-turn-helix HTH_40 PF14493.6 gi|452210962|ref|YP_007491076.1| - 0.074 13.5 0.1 2.7 8.5 0.0 2.3 1 1 0 2 2 2 0 Helix-turn-helix domain DUF3693 PF12472.8 gi|452210963|ref|YP_007491077.1| - 0.095 12.4 0.2 0.11 12.1 0.2 1.1 1 0 0 1 1 1 0 Phage related protein DsbD PF02683.15 gi|452210964|ref|YP_007491078.1| - 3.2e-09 37.0 5.1 3.5e-09 36.9 5.1 1.0 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DUF2627 PF11118.8 gi|452210964|ref|YP_007491078.1| - 0.012 16.2 5.7 0.12 13.0 0.6 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2627) MadM PF03818.13 gi|452210964|ref|YP_007491078.1| - 3 7.8 7.4 12 5.9 0.8 3.0 2 2 0 2 2 2 0 Malonate/sodium symporter MadM subunit HTH_24 PF13412.6 gi|452210965|ref|YP_007491079.1| - 1.4e-19 69.4 0.2 3.8e-11 42.4 0.5 2.6 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|452210965|ref|YP_007491079.1| - 1.7e-10 40.8 0.0 0.00023 21.2 0.0 2.3 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_5 PF01022.20 gi|452210965|ref|YP_007491079.1| - 2.8e-09 36.7 0.0 0.00031 20.5 0.0 2.6 3 0 0 3 3 2 2 Bacterial regulatory protein, arsR family HTH_36 PF13730.6 gi|452210965|ref|YP_007491079.1| - 8.1e-08 32.1 0.1 0.0038 17.1 0.0 2.5 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_11 PF08279.12 gi|452210965|ref|YP_007491079.1| - 8.4e-08 32.0 0.1 0.017 15.1 0.0 2.6 2 0 0 2 2 2 2 HTH domain HTH_IclR PF09339.10 gi|452210965|ref|YP_007491079.1| - 3.7e-06 26.6 0.0 0.023 14.5 0.0 2.2 2 0 0 2 2 2 2 IclR helix-turn-helix domain TrmB PF01978.19 gi|452210965|ref|YP_007491079.1| - 1.6e-05 24.6 0.1 0.0051 16.7 0.0 2.4 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB FaeA PF04703.12 gi|452210965|ref|YP_007491079.1| - 1.8e-05 25.0 0.4 0.16 12.4 0.0 2.4 2 0 0 2 2 2 2 FaeA-like protein MarR_2 PF12802.7 gi|452210965|ref|YP_007491079.1| - 2.4e-05 24.1 0.0 0.096 12.6 0.0 2.3 2 0 0 2 2 2 2 MarR family HTH_Crp_2 PF13545.6 gi|452210965|ref|YP_007491079.1| - 4.7e-05 23.3 0.0 0.0066 16.4 0.0 2.3 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain GerE PF00196.19 gi|452210965|ref|YP_007491079.1| - 5e-05 22.8 1.1 0.019 14.5 0.1 2.8 3 0 0 3 3 2 1 Bacterial regulatory proteins, luxR family HTH_41 PF14502.6 gi|452210965|ref|YP_007491079.1| - 0.00021 20.9 0.0 0.058 13.1 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_28 PF13518.6 gi|452210965|ref|YP_007491079.1| - 0.00029 20.9 0.0 0.41 10.8 0.0 2.5 2 0 0 2 2 2 2 Helix-turn-helix domain RepL PF05732.11 gi|452210965|ref|YP_007491079.1| - 0.00066 19.1 0.9 0.015 14.7 0.6 2.4 2 0 0 2 2 2 1 Firmicute plasmid replication protein (RepL) B-block_TFIIIC PF04182.12 gi|452210965|ref|YP_007491079.1| - 0.00071 19.7 2.2 0.38 10.9 0.1 3.3 3 0 0 3 3 3 1 B-block binding subunit of TFIIIC Penicillinase_R PF03965.16 gi|452210965|ref|YP_007491079.1| - 0.00085 19.7 0.5 0.038 14.3 0.1 2.5 1 1 1 2 2 2 1 Penicillinase repressor HTH_10 PF04967.12 gi|452210965|ref|YP_007491079.1| - 0.00097 18.9 0.0 1.6 8.5 0.0 2.6 2 0 0 2 2 2 2 HTH DNA binding domain MerR_1 PF13411.6 gi|452210965|ref|YP_007491079.1| - 0.0012 18.8 0.5 0.93 9.6 0.1 2.4 2 0 0 2 2 2 1 MerR HTH family regulatory protein Rrf2 PF02082.20 gi|452210965|ref|YP_007491079.1| - 0.0016 18.7 0.1 3.2 8.2 0.0 3.3 3 1 0 3 3 3 1 Transcriptional regulator HTH_17 PF12728.7 gi|452210965|ref|YP_007491079.1| - 0.003 17.7 0.3 1.9 8.7 0.0 2.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_AsnC-type PF13404.6 gi|452210965|ref|YP_007491079.1| - 0.0039 17.0 0.0 1.9 8.4 0.0 2.5 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|452210965|ref|YP_007491079.1| - 0.0078 15.9 0.0 1.7 8.4 0.0 2.7 2 0 0 2 2 2 1 Sigma-70, region 4 LacI PF00356.21 gi|452210965|ref|YP_007491079.1| - 0.0084 15.9 0.3 0.51 10.2 0.0 3.4 5 0 0 5 5 3 1 Bacterial regulatory proteins, lacI family MarR PF01047.22 gi|452210965|ref|YP_007491079.1| - 0.0099 15.8 0.0 0.29 11.1 0.1 2.4 2 0 0 2 2 2 1 MarR family Fe_dep_repress PF01325.19 gi|452210965|ref|YP_007491079.1| - 0.011 16.0 0.0 0.073 13.3 0.0 2.2 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain HTH_29 PF13551.6 gi|452210965|ref|YP_007491079.1| - 0.011 15.7 0.1 6 7.0 0.0 2.9 3 0 0 3 3 3 0 Winged helix-turn helix TetR_N PF00440.23 gi|452210965|ref|YP_007491079.1| - 0.012 15.4 0.0 0.74 9.7 0.0 2.3 2 0 0 2 2 2 0 Bacterial regulatory proteins, tetR family HTH_23 PF13384.6 gi|452210965|ref|YP_007491079.1| - 0.015 15.1 0.0 1.5 8.8 0.0 2.6 2 0 0 2 2 2 0 Homeodomain-like domain HTH_34 PF13601.6 gi|452210965|ref|YP_007491079.1| - 0.015 15.5 0.0 5 7.4 0.0 2.4 2 0 0 2 2 2 0 Winged helix DNA-binding domain Mrr_N PF14338.6 gi|452210965|ref|YP_007491079.1| - 0.019 15.1 0.1 0.049 13.8 0.1 1.7 1 0 0 1 1 1 0 Mrr N-terminal domain HTH_38 PF13936.6 gi|452210965|ref|YP_007491079.1| - 0.02 14.6 0.0 2.2 8.1 0.1 2.5 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_45 PF14947.6 gi|452210965|ref|YP_007491079.1| - 0.044 13.8 1.9 0.61 10.1 0.1 2.8 2 1 1 3 3 3 0 Winged helix-turn-helix HrcA_DNA-bdg PF03444.15 gi|452210965|ref|YP_007491079.1| - 0.052 13.2 0.1 0.4 10.4 0.1 2.3 2 0 0 2 2 2 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HTH_3 PF01381.22 gi|452210965|ref|YP_007491079.1| - 0.084 13.0 0.0 0.55 10.3 0.0 2.3 2 1 0 2 2 2 0 Helix-turn-helix AlgF PF11182.8 gi|452210965|ref|YP_007491079.1| - 0.089 12.6 0.0 0.17 11.6 0.0 1.4 1 0 0 1 1 1 0 Alginate O-acetyl transferase AlgF Phage_CI_repr PF07022.13 gi|452210965|ref|YP_007491079.1| - 0.16 12.1 0.0 0.31 11.2 0.0 1.5 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain DDE_3 PF13358.6 gi|452210966|ref|YP_007491080.1| - 0.0099 15.6 0.1 0.022 14.5 0.1 1.4 1 1 1 2 2 2 1 DDE superfamily endonuclease HSF_DNA-bind PF00447.17 gi|452210967|ref|YP_007491081.1| - 0.083 13.5 0.1 0.12 13.0 0.1 1.1 1 0 0 1 1 1 0 HSF-type DNA-binding Transposase_mut PF00872.18 gi|452210968|ref|YP_007491082.1| - 1.8e-87 293.7 0.4 2.4e-87 293.3 0.4 1.0 1 0 0 1 1 1 1 Transposase, Mutator family MULE PF10551.9 gi|452210968|ref|YP_007491082.1| - 3.3e-10 40.2 0.0 7.4e-10 39.1 0.0 1.6 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS66 PF03050.14 gi|452210968|ref|YP_007491082.1| - 6.3e-05 22.6 0.5 0.00015 21.4 0.0 1.7 1 1 1 2 2 2 1 Transposase IS66 family DDE_Tnp_ISL3 PF01610.17 gi|452210968|ref|YP_007491082.1| - 0.011 15.5 0.1 0.04 13.6 0.1 1.6 1 1 0 1 1 1 0 Transposase Dynein_light PF01221.18 gi|452210968|ref|YP_007491082.1| - 0.15 12.4 1.0 0.43 10.9 0.5 2.0 2 0 0 2 2 2 0 Dynein light chain type 1 DsbD PF02683.15 gi|452210970|ref|YP_007491084.1| - 2e-06 27.8 1.6 2e-06 27.8 1.6 1.7 2 1 0 2 2 2 1 Cytochrome C biogenesis protein transmembrane region Thioredoxin_3 PF13192.6 gi|452210970|ref|YP_007491084.1| - 6.9e-05 22.8 0.5 0.00014 21.8 0.1 1.7 1 1 1 2 2 2 1 Thioredoxin domain Thioredoxin PF00085.20 gi|452210970|ref|YP_007491084.1| - 0.025 14.6 0.1 0.04 13.9 0.1 1.3 1 0 0 1 1 1 0 Thioredoxin UPF0270 PF06794.12 gi|452210970|ref|YP_007491084.1| - 0.041 13.9 2.1 0.073 13.1 2.1 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0270) Glutaredoxin PF00462.24 gi|452210970|ref|YP_007491084.1| - 0.063 13.5 0.0 0.14 12.4 0.0 1.6 1 0 0 1 1 1 0 Glutaredoxin DUF3810 PF12725.7 gi|452210970|ref|YP_007491084.1| - 0.068 12.5 0.3 0.13 11.6 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3810) DUF836 PF05768.14 gi|452210970|ref|YP_007491084.1| - 0.14 12.6 0.3 0.29 11.6 0.2 1.5 1 1 0 1 1 1 0 Glutaredoxin-like domain (DUF836) RNR_N PF08343.10 gi|452210970|ref|YP_007491084.1| - 0.26 11.4 1.8 0.51 10.4 1.8 1.5 1 0 0 1 1 1 0 Ribonucleotide reductase N-terminal DsbD_2 PF13386.6 gi|452210970|ref|YP_007491084.1| - 1.6 8.7 8.0 1.5 8.7 0.7 2.2 1 1 1 2 2 2 0 Cytochrome C biogenesis protein transmembrane region DsbD PF02683.15 gi|452210971|ref|YP_007491085.1| - 0.0013 18.7 3.4 0.0013 18.6 3.4 1.0 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DUF2627 PF11118.8 gi|452210971|ref|YP_007491085.1| - 0.071 13.7 6.0 0.32 11.6 0.7 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2627) Yip1 PF04893.17 gi|452210972|ref|YP_007491086.1| - 1.5e-33 115.9 16.5 1.9e-33 115.6 16.5 1.1 1 0 0 1 1 1 1 Yip1 domain DUF1282 PF06930.12 gi|452210972|ref|YP_007491086.1| - 0.091 12.5 17.2 0.26 11.1 17.2 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1282) DUF1418 PF07214.12 gi|452210972|ref|YP_007491086.1| - 1.2 9.0 8.9 0.14 12.0 3.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1418) DUF2207 PF09972.9 gi|452210972|ref|YP_007491086.1| - 1.5 7.5 12.8 0.54 9.0 2.8 2.1 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) CPBP PF02517.16 gi|452210972|ref|YP_007491086.1| - 6.4 7.2 13.2 2.4 8.6 4.8 2.4 2 0 0 2 2 2 0 CPBP intramembrane metalloprotease ABC2_membrane PF01061.24 gi|452210973|ref|YP_007491087.1| - 2e-36 125.4 23.9 2e-36 125.4 23.9 1.7 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|452210973|ref|YP_007491087.1| - 7.6e-10 38.4 32.9 9.7e-10 38.1 32.9 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|452210973|ref|YP_007491087.1| - 2.3e-07 30.4 20.4 3e-07 30.0 20.4 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC_tran PF00005.27 gi|452210974|ref|YP_007491088.1| - 1.4e-32 113.1 0.0 2.4e-32 112.3 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|452210974|ref|YP_007491088.1| - 8.2e-10 39.0 1.6 1.7e-05 24.8 0.0 2.3 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|452210974|ref|YP_007491088.1| - 1.6e-08 35.1 0.0 3.5e-08 34.1 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_23 PF13476.6 gi|452210974|ref|YP_007491088.1| - 1.4e-05 25.7 0.0 2.2e-05 25.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|452210974|ref|YP_007491088.1| - 3.5e-05 23.7 0.0 0.19 11.4 0.0 2.2 1 1 1 2 2 2 2 AAA ATPase domain AAA_29 PF13555.6 gi|452210974|ref|YP_007491088.1| - 5.9e-05 22.7 0.1 0.00011 21.8 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_27 PF13514.6 gi|452210974|ref|YP_007491088.1| - 0.00021 20.9 0.9 0.0018 17.9 0.0 2.1 2 0 0 2 2 2 1 AAA domain SRP54 PF00448.22 gi|452210974|ref|YP_007491088.1| - 0.044 13.4 0.0 0.23 11.1 0.0 1.9 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA PF00004.29 gi|452210974|ref|YP_007491088.1| - 0.051 14.0 0.0 0.55 10.6 0.0 2.8 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) SMC_N PF02463.19 gi|452210974|ref|YP_007491088.1| - 0.057 12.8 0.0 3 7.2 0.0 2.2 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|452210974|ref|YP_007491088.1| - 0.059 13.3 0.0 0.12 12.2 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase Chordopox_L2 PF05803.12 gi|452210974|ref|YP_007491088.1| - 0.082 12.8 0.1 0.45 10.4 0.0 2.1 2 0 0 2 2 2 0 Chordopoxvirus L2 protein MobB PF03205.14 gi|452210974|ref|YP_007491088.1| - 0.11 12.5 0.3 13 5.7 0.1 2.3 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_24 PF13479.6 gi|452210974|ref|YP_007491088.1| - 0.15 11.8 0.0 0.7 9.6 0.0 2.0 2 1 0 2 2 2 0 AAA domain ABC_tran PF00005.27 gi|452210975|ref|YP_007491089.1| - 1.2e-54 184.5 0.0 9.5e-29 100.7 0.0 2.2 2 0 0 2 2 2 2 ABC transporter oligo_HPY PF08352.12 gi|452210975|ref|YP_007491089.1| - 1.1e-18 67.5 0.0 4.2e-16 59.2 0.0 2.4 2 0 0 2 2 2 1 Oligopeptide/dipeptide transporter, C-terminal region SMC_N PF02463.19 gi|452210975|ref|YP_007491089.1| - 1e-16 61.0 0.1 1.5e-08 34.4 0.0 3.0 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|452210975|ref|YP_007491089.1| - 1.4e-13 51.2 0.2 1.6e-05 25.2 0.1 3.5 2 2 0 2 2 2 2 AAA domain AAA_21 PF13304.6 gi|452210975|ref|YP_007491089.1| - 3.8e-11 43.4 1.2 0.00033 20.6 0.0 4.1 4 0 0 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|452210975|ref|YP_007491089.1| - 2.5e-08 33.5 0.2 0.0016 18.1 0.0 2.6 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|452210975|ref|YP_007491089.1| - 5.9e-07 30.0 0.5 0.012 16.0 0.0 2.7 3 1 0 3 3 2 2 AAA ATPase domain AAA_25 PF13481.6 gi|452210975|ref|YP_007491089.1| - 1.7e-06 27.7 0.2 0.039 13.5 0.0 3.6 3 1 0 3 3 3 2 AAA domain AAA PF00004.29 gi|452210975|ref|YP_007491089.1| - 1.7e-06 28.5 0.9 0.031 14.7 0.1 3.9 2 2 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 gi|452210975|ref|YP_007491089.1| - 3.7e-06 27.0 0.3 0.13 12.1 0.0 3.3 4 0 0 4 4 3 2 NACHT domain RsgA_GTPase PF03193.16 gi|452210975|ref|YP_007491089.1| - 8.9e-06 25.7 0.2 0.02 14.8 0.0 2.5 2 0 0 2 2 2 2 RsgA GTPase TniB PF05621.11 gi|452210975|ref|YP_007491089.1| - 1.1e-05 24.9 0.2 1.7 8.0 0.0 4.1 4 0 0 4 4 4 1 Bacterial TniB protein DUF87 PF01935.17 gi|452210975|ref|YP_007491089.1| - 1.6e-05 25.1 0.7 0.0044 17.1 0.0 2.4 2 0 0 2 2 2 1 Helicase HerA, central domain AAA_23 PF13476.6 gi|452210975|ref|YP_007491089.1| - 2.3e-05 25.0 0.2 0.14 12.7 0.0 2.2 2 0 0 2 2 2 2 AAA domain AAA_33 PF13671.6 gi|452210975|ref|YP_007491089.1| - 2.4e-05 24.5 0.0 0.1 12.7 0.0 2.4 2 0 0 2 2 2 2 AAA domain IstB_IS21 PF01695.17 gi|452210975|ref|YP_007491089.1| - 3e-05 23.8 1.0 0.53 10.0 0.0 3.9 4 0 0 4 4 4 1 IstB-like ATP binding protein NB-ARC PF00931.22 gi|452210975|ref|YP_007491089.1| - 3.4e-05 23.2 0.3 0.26 10.4 0.1 2.4 2 0 0 2 2 2 2 NB-ARC domain APS_kinase PF01583.20 gi|452210975|ref|YP_007491089.1| - 6e-05 23.0 0.0 0.097 12.6 0.0 2.5 2 0 0 2 2 2 2 Adenylylsulphate kinase ATPase PF06745.13 gi|452210975|ref|YP_007491089.1| - 6.1e-05 22.5 3.3 2.6 7.3 0.0 3.2 3 0 0 3 3 3 2 KaiC PRK PF00485.18 gi|452210975|ref|YP_007491089.1| - 7.4e-05 22.6 0.0 0.048 13.4 0.0 2.3 2 0 0 2 2 2 1 Phosphoribulokinase / Uridine kinase family AAA_5 PF07728.14 gi|452210975|ref|YP_007491089.1| - 9e-05 22.5 0.1 0.8 9.7 0.0 3.3 4 0 0 4 4 2 2 AAA domain (dynein-related subfamily) Zeta_toxin PF06414.12 gi|452210975|ref|YP_007491089.1| - 9.6e-05 21.8 0.0 0.0098 15.2 0.0 2.2 2 0 0 2 2 2 1 Zeta toxin Mg_chelatase PF01078.21 gi|452210975|ref|YP_007491089.1| - 0.00011 21.6 0.0 0.32 10.3 0.0 2.6 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI CLP1_P PF16575.5 gi|452210975|ref|YP_007491089.1| - 0.00023 21.0 0.1 0.00081 19.2 0.0 1.9 2 0 0 2 2 2 1 mRNA cleavage and polyadenylation factor CLP1 P-loop T2SSE PF00437.20 gi|452210975|ref|YP_007491089.1| - 0.00026 20.2 0.1 0.039 13.0 0.0 2.5 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_24 PF13479.6 gi|452210975|ref|YP_007491089.1| - 0.00047 19.9 0.2 0.4 10.4 0.1 2.3 2 0 0 2 2 2 1 AAA domain MMR_HSR1 PF01926.23 gi|452210975|ref|YP_007491089.1| - 0.00097 19.2 0.1 0.36 10.9 0.0 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase PhoH PF02562.16 gi|452210975|ref|YP_007491089.1| - 0.001 18.6 0.1 1.5 8.2 0.0 2.4 2 0 0 2 2 2 2 PhoH-like protein AAA_7 PF12775.7 gi|452210975|ref|YP_007491089.1| - 0.0011 18.5 0.1 1.4 8.4 0.0 2.3 2 0 0 2 2 2 2 P-loop containing dynein motor region AAA_18 PF13238.6 gi|452210975|ref|YP_007491089.1| - 0.0011 19.4 0.0 2 8.9 0.0 2.4 2 0 0 2 2 2 1 AAA domain DEAD PF00270.29 gi|452210975|ref|YP_007491089.1| - 0.0014 18.5 1.1 1 9.1 0.0 3.3 2 2 0 2 2 2 1 DEAD/DEAH box helicase CbiA PF01656.23 gi|452210975|ref|YP_007491089.1| - 0.0016 18.5 0.6 0.65 10.1 0.2 2.5 2 0 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain MobB PF03205.14 gi|452210975|ref|YP_007491089.1| - 0.0021 18.0 0.1 0.74 9.7 0.0 2.5 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B RNA_helicase PF00910.22 gi|452210975|ref|YP_007491089.1| - 0.0023 18.3 0.0 0.63 10.5 0.0 2.5 2 0 0 2 2 2 1 RNA helicase NTPase_1 PF03266.15 gi|452210975|ref|YP_007491089.1| - 0.0038 17.2 1.9 2.4 8.0 0.1 2.8 3 0 0 3 3 2 2 NTPase Rad17 PF03215.15 gi|452210975|ref|YP_007491089.1| - 0.0042 17.0 0.1 0.95 9.4 0.0 2.8 3 1 0 3 3 2 1 Rad17 P-loop domain SRP54 PF00448.22 gi|452210975|ref|YP_007491089.1| - 0.0045 16.6 0.4 0.14 11.8 0.0 2.4 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain Sigma54_activat PF00158.26 gi|452210975|ref|YP_007491089.1| - 0.0048 16.6 0.3 1.7 8.3 0.0 2.5 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_30 PF13604.6 gi|452210975|ref|YP_007491089.1| - 0.0055 16.4 2.1 0.48 10.1 0.2 3.1 3 1 0 3 3 2 1 AAA domain TrwB_AAD_bind PF10412.9 gi|452210975|ref|YP_007491089.1| - 0.0062 15.5 0.1 1.6 7.6 0.0 2.4 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain AAA_14 PF13173.6 gi|452210975|ref|YP_007491089.1| - 0.0074 16.3 0.1 3.1 7.9 0.0 3.6 3 1 0 3 3 3 0 AAA domain AAA_15 PF13175.6 gi|452210975|ref|YP_007491089.1| - 0.01 15.6 0.0 1.1 8.8 0.0 2.1 2 0 0 2 2 2 0 AAA ATPase domain FtsK_SpoIIIE PF01580.18 gi|452210975|ref|YP_007491089.1| - 0.013 14.9 0.1 0.63 9.4 0.0 2.2 2 0 0 2 2 2 0 FtsK/SpoIIIE family ATP-synt_ab PF00006.25 gi|452210975|ref|YP_007491089.1| - 0.016 14.9 0.0 5.6 6.6 0.0 2.4 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain Pox_A32 PF04665.12 gi|452210975|ref|YP_007491089.1| - 0.024 14.1 0.0 2.5 7.5 0.0 2.4 2 0 0 2 2 2 0 Poxvirus A32 protein RecA PF00154.21 gi|452210975|ref|YP_007491089.1| - 0.03 13.8 0.5 2.4 7.5 0.1 2.6 2 0 0 2 2 2 0 recA bacterial DNA recombination protein TsaE PF02367.17 gi|452210975|ref|YP_007491089.1| - 0.047 13.7 0.1 4.1 7.4 0.0 2.4 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABC_ATPase PF09818.9 gi|452210975|ref|YP_007491089.1| - 0.049 12.4 5.5 8.1 5.1 0.0 4.1 4 1 0 4 4 4 0 Predicted ATPase of the ABC class ATPase_2 PF01637.18 gi|452210975|ref|YP_007491089.1| - 0.053 13.4 0.0 7 6.5 0.0 2.6 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea ResIII PF04851.15 gi|452210975|ref|YP_007491089.1| - 0.056 13.4 0.0 5 7.1 0.0 2.2 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit TIP49 PF06068.13 gi|452210975|ref|YP_007491089.1| - 0.057 12.6 0.1 2.1 7.5 0.0 2.2 2 0 0 2 2 2 0 TIP49 P-loop domain Roc PF08477.13 gi|452210975|ref|YP_007491089.1| - 0.059 13.6 0.1 16 5.8 0.0 2.3 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AAA_19 PF13245.6 gi|452210975|ref|YP_007491089.1| - 0.064 13.6 0.2 8.1 6.8 0.0 2.8 3 0 0 3 3 2 0 AAA domain ATP_bind_1 PF03029.17 gi|452210975|ref|YP_007491089.1| - 0.069 12.9 0.6 7.1 6.3 0.0 2.4 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein Cytidylate_kin PF02224.18 gi|452210975|ref|YP_007491089.1| - 0.076 12.7 0.0 6.3 6.5 0.0 2.5 2 0 0 2 2 2 0 Cytidylate kinase DUF2075 PF09848.9 gi|452210975|ref|YP_007491089.1| - 0.11 11.7 0.2 6.9 5.8 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) cobW PF02492.19 gi|452210975|ref|YP_007491089.1| - 0.15 11.6 0.7 15 5.1 0.0 2.4 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Thymidylate_kin PF02223.17 gi|452210975|ref|YP_007491089.1| - 0.19 11.4 0.1 6.8 6.3 0.0 2.3 2 0 0 2 2 2 0 Thymidylate kinase dNK PF01712.19 gi|452210975|ref|YP_007491089.1| - 0.23 11.3 0.9 0.68 9.7 0.0 2.0 2 0 0 2 2 2 0 Deoxynucleoside kinase SbcCD_C PF13558.6 gi|452210975|ref|YP_007491089.1| - 0.23 11.7 1.2 38 4.6 0.2 3.1 2 2 0 2 2 2 0 Putative exonuclease SbcCD, C subunit G-alpha PF00503.20 gi|452210975|ref|YP_007491089.1| - 0.24 10.5 0.0 8 5.5 0.0 2.1 2 0 0 2 2 2 0 G-protein alpha subunit BPD_transp_1 PF00528.22 gi|452210976|ref|YP_007491090.1| - 2.5e-26 92.6 11.5 2.5e-26 92.6 11.5 1.9 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|452210976|ref|YP_007491090.1| - 0.0024 17.8 0.9 0.0024 17.8 0.9 4.5 5 1 0 5 5 5 1 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.22 gi|452210977|ref|YP_007491091.1| - 2.3e-34 118.7 11.1 2.3e-34 118.7 11.1 1.7 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Methyltransf_25 PF13649.6 gi|452210978|ref|YP_007491092.1| - 3.1e-14 53.4 0.0 6.4e-14 52.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|452210978|ref|YP_007491092.1| - 1.3e-11 45.0 0.0 2.5e-11 44.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|452210978|ref|YP_007491092.1| - 6.9e-09 35.7 0.0 1.2e-08 35.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 gi|452210978|ref|YP_007491092.1| - 7.1e-08 32.1 0.0 1.1e-07 31.4 0.0 1.5 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_12 PF08242.12 gi|452210978|ref|YP_007491092.1| - 1.8e-07 31.8 0.0 4.3e-07 30.6 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|452210978|ref|YP_007491092.1| - 3.2e-07 30.3 0.0 5.4e-07 29.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|452210978|ref|YP_007491092.1| - 1.6e-06 27.8 0.0 2.3e-06 27.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain RrnaAD PF00398.20 gi|452210978|ref|YP_007491092.1| - 1.9e-06 27.1 0.0 2.5e-06 26.8 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase NodS PF05401.11 gi|452210978|ref|YP_007491092.1| - 5.5e-06 26.1 0.0 7.4e-06 25.7 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) PrmA PF06325.13 gi|452210978|ref|YP_007491092.1| - 4.5e-05 23.0 0.0 6.9e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_18 PF12847.7 gi|452210978|ref|YP_007491092.1| - 0.00015 21.7 0.0 0.00024 21.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|452210978|ref|YP_007491092.1| - 0.00034 20.0 0.0 0.00053 19.4 0.0 1.4 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Ubie_methyltran PF01209.18 gi|452210978|ref|YP_007491092.1| - 0.0004 19.8 0.0 0.0007 19.0 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family FtsJ PF01728.19 gi|452210978|ref|YP_007491092.1| - 0.00056 20.1 0.0 0.00096 19.3 0.0 1.3 1 0 0 1 1 1 1 FtsJ-like methyltransferase DREV PF05219.12 gi|452210978|ref|YP_007491092.1| - 0.0028 16.8 0.0 0.004 16.3 0.0 1.4 1 0 0 1 1 1 1 DREV methyltransferase MetW PF07021.12 gi|452210978|ref|YP_007491092.1| - 0.0099 15.5 0.1 0.023 14.3 0.0 1.7 1 1 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltr_RsmB-F PF01189.17 gi|452210978|ref|YP_007491092.1| - 0.11 12.2 0.0 0.24 11.0 0.0 1.6 2 0 0 2 2 2 0 16S rRNA methyltransferase RsmB/F Methyltransf_32 PF13679.6 gi|452210978|ref|YP_007491092.1| - 0.12 12.3 0.0 0.24 11.4 0.0 1.5 1 1 0 1 1 1 0 Methyltransferase domain Ribosomal_S6e PF01092.19 gi|452210980|ref|YP_007491094.1| - 2.2e-41 140.7 0.1 2.5e-41 140.5 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S6e GTP_EFTU PF00009.27 gi|452210981|ref|YP_007491095.1| - 5.4e-33 114.2 0.2 4.7e-31 107.9 0.2 2.5 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D4 PF14578.6 gi|452210981|ref|YP_007491095.1| - 1.4e-29 101.9 2.4 1.4e-29 101.9 2.4 2.4 3 0 0 3 3 3 1 Elongation factor Tu domain 4 IF-2 PF11987.8 gi|452210981|ref|YP_007491095.1| - 3.7e-22 78.5 5.2 1.2e-21 76.8 0.5 3.0 3 0 0 3 3 3 1 Translation-initiation factor 2 GTP_EFTU_D2 PF03144.25 gi|452210981|ref|YP_007491095.1| - 4.6e-13 49.4 5.7 4.3e-10 39.9 0.1 2.7 2 0 0 2 2 2 2 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|452210981|ref|YP_007491095.1| - 1.3e-08 34.9 0.2 3.9e-08 33.4 0.0 2.0 2 0 0 2 2 2 1 50S ribosome-binding GTPase ATP_bind_1 PF03029.17 gi|452210981|ref|YP_007491095.1| - 0.0034 17.2 0.0 0.011 15.6 0.0 1.8 1 1 1 2 2 2 1 Conserved hypothetical ATP binding protein Dynamin_N PF00350.23 gi|452210981|ref|YP_007491095.1| - 0.032 14.3 0.0 0.92 9.5 0.0 2.6 2 0 0 2 2 2 0 Dynamin family PduV-EutP PF10662.9 gi|452210981|ref|YP_007491095.1| - 0.045 13.5 0.0 0.5 10.1 0.0 2.5 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation cobW PF02492.19 gi|452210981|ref|YP_007491095.1| - 0.11 12.1 0.0 10 5.6 0.0 2.7 3 0 0 3 3 3 0 CobW/HypB/UreG, nucleotide-binding domain Roc PF08477.13 gi|452210981|ref|YP_007491095.1| - 0.13 12.5 0.0 0.46 10.7 0.0 2.0 1 1 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase DUF1908 PF08926.11 gi|452210981|ref|YP_007491095.1| - 0.15 11.1 0.0 0.24 10.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1908) NDK PF00334.19 gi|452210983|ref|YP_007491097.1| - 1e-55 187.4 0.0 1.2e-55 187.2 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase Ribosomal_L24e PF01246.20 gi|452210984|ref|YP_007491098.1| - 2.4e-19 69.3 1.2 2.5e-19 69.3 1.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L24e YHS PF04945.13 gi|452210984|ref|YP_007491098.1| - 8.5e-05 22.6 2.2 0.00012 22.1 2.2 1.2 1 0 0 1 1 1 1 YHS domain zf-FCS PF06467.14 gi|452210984|ref|YP_007491098.1| - 0.056 13.4 3.8 0.083 12.8 3.8 1.3 1 0 0 1 1 1 0 MYM-type Zinc finger with FCS sequence motif VATC PF18716.1 gi|452210984|ref|YP_007491098.1| - 0.17 11.7 4.8 0.31 10.9 4.8 1.5 1 1 0 1 1 1 0 Vms1-associating treble clef domain Ribosomal_S28e PF01200.18 gi|452210985|ref|YP_007491099.1| - 3.4e-28 97.4 0.6 3.7e-28 97.3 0.6 1.0 1 0 0 1 1 1 1 Ribosomal protein S28e Ribosomal_L7Ae PF01248.26 gi|452210986|ref|YP_007491100.1| - 3.6e-26 90.7 0.8 4.2e-26 90.5 0.8 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PELOTA_1 PF15608.6 gi|452210986|ref|YP_007491100.1| - 0.0018 18.2 0.0 0.0027 17.6 0.0 1.3 1 0 0 1 1 1 1 PELOTA RNA binding domain Radical_SAM PF04055.21 gi|452210987|ref|YP_007491101.1| - 6.1e-21 75.5 0.1 6.9e-21 75.3 0.1 1.1 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|452210987|ref|YP_007491101.1| - 2.3e-08 34.2 0.0 4.8e-08 33.2 0.0 1.5 1 1 0 1 1 1 1 4Fe-4S single cluster domain WD40 PF00400.32 gi|452210989|ref|YP_007491103.1| - 2.2e-25 88.4 15.8 0.044 14.7 0.0 8.4 8 0 0 8 8 8 7 WD domain, G-beta repeat PQQ PF01011.21 gi|452210989|ref|YP_007491103.1| - 5.6e-22 76.6 21.0 0.00017 21.4 0.1 7.3 7 0 0 7 7 7 5 PQQ enzyme repeat PQQ_3 PF13570.6 gi|452210989|ref|YP_007491103.1| - 1.9e-21 75.9 20.3 3.7e-06 27.3 0.1 8.5 9 0 0 9 9 8 4 PQQ-like domain PQQ_2 PF13360.6 gi|452210989|ref|YP_007491103.1| - 3.7e-20 72.5 9.1 1.9e-09 37.5 0.6 2.7 1 1 2 3 3 3 3 PQQ-like domain ANAPC4_WD40 PF12894.7 gi|452210989|ref|YP_007491103.1| - 1.9e-12 47.3 0.0 0.15 12.3 0.0 5.4 1 1 5 6 6 6 3 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 gi|452210989|ref|YP_007491103.1| - 3.6e-06 26.5 0.3 0.2 11.0 0.0 3.8 3 1 1 4 4 4 2 WD40-like domain eIF2A PF08662.11 gi|452210989|ref|YP_007491103.1| - 0.00013 21.9 0.3 0.02 14.8 0.0 3.1 1 1 2 3 3 3 1 Eukaryotic translation initiation factor eIF2A HPS3_N PF14761.6 gi|452210989|ref|YP_007491103.1| - 0.0035 16.9 0.0 0.022 14.3 0.0 2.2 2 0 0 2 2 2 1 Hermansky-Pudlak syndrome 3 VID27 PF08553.10 gi|452210989|ref|YP_007491103.1| - 0.033 13.2 0.3 0.26 10.3 0.1 2.3 1 1 0 2 2 2 0 VID27 C-terminal WD40-like domain Ge1_WD40 PF16529.5 gi|452210989|ref|YP_007491103.1| - 0.089 11.7 1.7 11 4.8 0.0 3.9 4 1 1 5 5 5 0 WD40 region of Ge1, enhancer of mRNA-decapping protein Cytochrom_D1 PF02239.16 gi|452210989|ref|YP_007491103.1| - 0.2 10.2 4.7 0.13 10.8 0.3 2.4 2 1 0 3 3 3 0 Cytochrome D1 heme domain PKD PF00801.20 gi|452210990|ref|YP_007491104.1| - 7e-146 474.3 98.4 4.5e-16 58.4 3.1 13.1 13 0 0 13 13 13 12 PKD domain Lactonase PF10282.9 gi|452210990|ref|YP_007491104.1| - 3.6e-33 115.2 12.1 1.1e-08 34.8 0.2 7.5 2 2 5 7 7 7 7 Lactonase, 7-bladed beta-propeller PKD_3 PF16820.5 gi|452210990|ref|YP_007491104.1| - 3.7e-25 87.5 39.1 0.059 13.1 0.1 12.4 12 0 0 12 12 12 9 PKD-like domain Cytochrom_D1 PF02239.16 gi|452210990|ref|YP_007491104.1| - 5.6e-21 74.5 13.8 2.6e-06 26.2 0.3 5.5 2 2 2 5 5 5 4 Cytochrome D1 heme domain SGL PF08450.12 gi|452210990|ref|YP_007491104.1| - 4.9e-17 62.3 19.7 2.5e-08 33.8 2.6 8.1 3 2 3 6 6 6 4 SMP-30/Gluconolactonase/LRE-like region NHL PF01436.21 gi|452210990|ref|YP_007491104.1| - 3e-15 55.4 20.7 1.1 9.4 0.0 11.7 11 0 0 11 11 11 3 NHL repeat Arylesterase PF01731.20 gi|452210990|ref|YP_007491104.1| - 1.2e-13 51.1 21.0 0.21 11.8 0.1 12.1 5 2 8 13 13 13 2 Arylesterase ChitinaseA_N PF08329.10 gi|452210990|ref|YP_007491104.1| - 3.6e-12 46.1 18.3 0.69 9.6 0.0 11.0 10 1 2 12 12 11 4 Chitinase A, N-terminal domain PD40 PF07676.12 gi|452210990|ref|YP_007491104.1| - 7.2e-12 44.9 0.0 12 6.0 0.0 10.2 10 0 0 10 10 10 0 WD40-like Beta Propeller Repeat MG2 PF01835.19 gi|452210990|ref|YP_007491104.1| - 4.9e-08 33.3 39.9 2.4 8.6 0.1 12.3 9 3 3 12 12 12 2 MG2 domain SBP56 PF05694.11 gi|452210990|ref|YP_007491104.1| - 2.7e-06 26.5 0.1 3.3 6.4 0.0 5.7 4 2 2 6 6 6 2 56kDa selenium binding protein (SBP56) DUF4221 PF13970.6 gi|452210990|ref|YP_007491104.1| - 7e-06 25.8 0.0 5.2 6.5 0.0 5.2 2 2 3 6 6 6 2 Domain of unknown function (DUF4221) Str_synth PF03088.16 gi|452210990|ref|YP_007491104.1| - 9e-06 25.7 0.5 35 4.6 0.0 7.9 6 2 4 10 10 9 0 Strictosidine synthase Svf1 PF08622.10 gi|452210990|ref|YP_007491104.1| - 5.9e-05 23.2 3.2 2.8 8.0 0.0 5.5 2 2 3 5 5 5 1 Svf1-like N-terminal lipocalin domain P_proprotein PF01483.20 gi|452210990|ref|YP_007491104.1| - 0.0019 18.2 0.2 79 3.4 0.0 6.5 6 0 0 6 6 5 0 Proprotein convertase P-domain Biotin_carb_N PF00289.22 gi|452210990|ref|YP_007491104.1| - 0.061 13.9 1.4 22 5.6 0.0 4.3 5 0 0 5 5 4 0 Biotin carboxylase, N-terminal domain DUF1513 PF07433.11 gi|452210990|ref|YP_007491104.1| - 0.43 9.6 5.8 18 4.3 0.0 4.8 3 2 2 6 6 6 0 Protein of unknown function (DUF1513) Kunitz_legume PF00197.18 gi|452210990|ref|YP_007491104.1| - 0.59 10.1 6.2 1.1e+02 2.6 0.0 6.0 6 1 1 7 7 6 0 Trypsin and protease inhibitor DUF4213 PF13938.6 gi|452210990|ref|YP_007491104.1| - 1.8 8.9 4.2 23 5.3 0.2 3.6 3 1 1 4 4 3 0 Putative heavy-metal chelation V-set PF07686.17 gi|452210990|ref|YP_007491104.1| - 4.5 7.5 25.1 19 5.5 0.0 9.6 12 0 0 12 12 12 0 Immunoglobulin V-set domain SoxZ PF08770.11 gi|452210990|ref|YP_007491104.1| - 9.7 6.0 18.9 39 4.1 0.0 8.6 11 1 1 12 12 10 0 Sulphur oxidation protein SoxZ NosD PF05048.13 gi|452210991|ref|YP_007491105.1| - 2.2e-65 220.3 66.6 3.8e-49 167.1 29.3 2.8 1 1 2 3 3 3 3 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|452210991|ref|YP_007491105.1| - 1.3e-23 83.5 55.9 2e-14 53.8 18.9 3.4 2 2 1 3 3 3 2 Right handed beta helix region DPPIV_rep PF18811.1 gi|452210991|ref|YP_007491105.1| - 8 6.5 7.1 6.9 6.7 0.9 3.3 3 0 0 3 3 3 0 Dipeptidyl peptidase IV (DPP IV) low complexity region DUF86 PF01934.17 gi|452210992|ref|YP_007491106.1| - 2.2e-25 88.9 0.0 2.8e-25 88.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF86 Acetyltransf_3 PF13302.7 gi|452210993|ref|YP_007491107.1| - 2.2e-24 86.7 0.0 2.6e-24 86.5 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|452210993|ref|YP_007491107.1| - 8e-10 39.0 0.0 9.6e-10 38.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_4 PF13420.7 gi|452210993|ref|YP_007491107.1| - 1.5e-09 38.2 0.1 1.7e-09 38.0 0.1 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|452210993|ref|YP_007491107.1| - 1.6e-06 27.9 0.0 2.3e-06 27.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain SpoVT_C PF15714.5 gi|452210993|ref|YP_007491107.1| - 0.036 14.1 0.0 0.058 13.4 0.0 1.4 1 0 0 1 1 1 0 Stage V sporulation protein T C-terminal, transcription factor VAPB_antitox PF02697.14 gi|452210994|ref|YP_007491108.1| - 9.6e-18 64.7 1.8 1.1e-17 64.5 1.8 1.0 1 0 0 1 1 1 1 Putative antitoxin ATP-gua_PtransN PF02807.15 gi|452210994|ref|YP_007491108.1| - 0.089 13.2 0.0 0.11 12.9 0.0 1.3 1 1 0 1 1 1 0 ATP:guanido phosphotransferase, N-terminal domain Fe-S_biosyn PF01521.20 gi|452210994|ref|YP_007491108.1| - 0.11 12.7 0.1 0.12 12.6 0.1 1.1 1 0 0 1 1 1 0 Iron-sulphur cluster biosynthesis FpoO PF10621.9 gi|452210995|ref|YP_007491109.1| - 4.8e-48 162.0 1.9 5.9e-48 161.8 1.9 1.0 1 0 0 1 1 1 1 F420H2 dehydrogenase subunit FpoO zf-C4pol PF14260.6 gi|452210995|ref|YP_007491109.1| - 0.0059 17.0 0.2 0.83 10.2 0.1 2.3 1 1 0 2 2 2 1 C4-type zinc-finger of DNA polymerase delta DUF2527 PF10736.9 gi|452210995|ref|YP_007491109.1| - 0.065 13.1 0.1 0.19 11.6 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2627) DUF4428 PF14471.6 gi|452210995|ref|YP_007491109.1| - 0.07 13.1 9.6 0.3 11.0 1.1 3.3 2 2 0 2 2 2 0 Domain of unknown function (DUF4428) zf-AD PF07776.15 gi|452210995|ref|YP_007491109.1| - 0.55 10.5 4.9 25 5.2 0.2 2.5 1 1 1 2 2 2 0 Zinc-finger associated domain (zf-AD) FYVE PF01363.21 gi|452210995|ref|YP_007491109.1| - 0.86 9.8 7.1 1.5 9.0 4.7 2.3 2 1 1 3 3 3 0 FYVE zinc finger Ribosomal_L28 PF00830.19 gi|452210995|ref|YP_007491109.1| - 1.1 9.5 4.1 41 4.5 0.1 3.3 3 0 0 3 3 3 0 Ribosomal L28 family Proton_antipo_M PF00361.20 gi|452210996|ref|YP_007491110.1| - 2.5e-70 237.0 29.7 2.5e-70 237.0 29.7 2.2 2 0 0 2 2 2 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|452210996|ref|YP_007491110.1| - 0.72 10.0 6.8 0.34 11.0 0.8 3.2 2 0 0 2 2 2 0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Proton_antipo_M PF00361.20 gi|452210997|ref|YP_007491111.1| - 2.3e-71 240.4 29.7 2.3e-71 240.4 29.7 2.0 2 0 0 2 2 2 1 Proton-conducting membrane transporter Oxidored_q5_N PF01059.17 gi|452210997|ref|YP_007491111.1| - 0.016 15.3 5.2 0.016 15.3 5.2 4.6 4 1 0 5 5 5 0 NADH-ubiquinone oxidoreductase chain 4, amino terminus Proton_antipo_M PF00361.20 gi|452210998|ref|YP_007491112.1| - 6.5e-73 245.5 24.6 6.5e-73 245.5 24.6 2.7 3 1 0 3 3 3 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|452210998|ref|YP_007491112.1| - 2.1e-16 59.7 2.0 2.1e-16 59.7 2.0 3.9 4 0 0 4 4 4 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Proton_antipo_C PF01010.19 gi|452210998|ref|YP_007491112.1| - 0.38 10.3 9.3 9.5 5.8 9.3 2.7 1 1 0 1 1 1 0 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus Oxidored_q2 PF00420.24 gi|452210999|ref|YP_007491113.1| - 8.7e-25 86.4 5.7 9.7e-25 86.2 5.7 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BMC PF00936.19 gi|452210999|ref|YP_007491113.1| - 0.029 14.4 0.1 0.037 14.0 0.1 1.1 1 0 0 1 1 1 0 BMC domain DUF5422 PF17459.2 gi|452210999|ref|YP_007491113.1| - 0.041 14.1 1.2 0.049 13.8 1.2 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5422) Oxidored_q3 PF00499.20 gi|452211000|ref|YP_007491114.1| - 7.1e-12 45.3 1.3 7.6e-12 45.2 1.3 1.0 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Oxidored_q3 PF00499.20 gi|452211001|ref|YP_007491115.1| - 2.7e-20 72.6 13.1 2.7e-20 72.6 13.1 1.5 1 1 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 SLATT_6 PF18169.1 gi|452211001|ref|YP_007491115.1| - 0.56 9.8 5.4 0.21 11.2 3.1 1.4 1 1 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain 6 DUF2109 PF09882.9 gi|452211001|ref|YP_007491115.1| - 0.85 9.7 10.5 0.45 10.6 8.2 1.6 1 1 1 2 2 2 0 Predicted membrane protein (DUF2109) GPI2 PF06432.11 gi|452211001|ref|YP_007491115.1| - 2.1 7.7 7.6 2.5 7.5 7.6 1.1 1 0 0 1 1 1 0 Phosphatidylinositol N-acetylglucosaminyltransferase Fer4 PF00037.27 gi|452211002|ref|YP_007491116.1| - 3.8e-15 55.0 10.7 2.1e-08 33.6 2.8 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|452211002|ref|YP_007491116.1| - 1.8e-12 47.6 6.3 3.2e-12 46.8 6.3 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452211002|ref|YP_007491116.1| - 1.4e-09 37.9 6.6 1.7e-09 37.7 5.8 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|452211002|ref|YP_007491116.1| - 2e-08 34.6 4.2 4e-08 33.6 4.2 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452211002|ref|YP_007491116.1| - 2.2e-08 34.9 8.1 0.00086 20.2 1.8 2.4 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|452211002|ref|YP_007491116.1| - 6.9e-08 32.5 9.2 6.9e-08 32.5 9.2 1.7 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|452211002|ref|YP_007491116.1| - 1.4e-07 31.5 8.9 2.9e-07 30.5 8.9 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452211002|ref|YP_007491116.1| - 9.4e-07 28.6 9.2 0.00011 22.1 2.1 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|452211002|ref|YP_007491116.1| - 7.2e-06 25.9 15.6 5.5e-05 23.1 3.4 2.5 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_22 PF17179.4 gi|452211002|ref|YP_007491116.1| - 3.8e-05 24.4 5.2 0.0088 16.9 0.4 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|452211002|ref|YP_007491116.1| - 0.00014 22.5 5.2 0.0093 16.7 0.6 2.6 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_17 PF13534.6 gi|452211002|ref|YP_007491116.1| - 0.00063 20.2 12.0 0.037 14.6 10.5 2.5 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|452211002|ref|YP_007491116.1| - 0.0008 19.9 9.8 0.0019 18.7 2.4 2.4 2 0 0 2 2 2 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_18 PF13746.6 gi|452211002|ref|YP_007491116.1| - 0.00084 19.5 4.3 0.38 11.0 0.2 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|452211002|ref|YP_007491116.1| - 0.0013 19.1 14.5 0.0058 17.0 2.0 2.7 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|452211002|ref|YP_007491116.1| - 0.0016 19.3 19.0 0.0056 17.5 2.9 2.7 3 0 0 3 3 2 2 4Fe-4S binding domain Oxidored_q4 PF00507.19 gi|452211003|ref|YP_007491117.1| - 2.8e-33 114.0 4.5 4.2e-33 113.5 4.5 1.2 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Amino_oxidase PF01593.24 gi|452211004|ref|YP_007491118.1| - 1.5e-08 34.3 0.0 1.9e-08 34.1 0.0 1.0 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase DAO PF01266.24 gi|452211004|ref|YP_007491118.1| - 0.0015 18.2 0.0 0.0019 17.8 0.0 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|452211004|ref|YP_007491118.1| - 0.036 13.3 0.2 9.1 5.4 0.0 2.5 1 1 2 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|452211004|ref|YP_007491118.1| - 0.071 11.8 0.0 0.09 11.5 0.0 1.1 1 0 0 1 1 1 0 HI0933-like protein GMC_oxred_N PF00732.19 gi|452211004|ref|YP_007491118.1| - 0.14 11.5 0.0 0.21 11.0 0.0 1.2 1 0 0 1 1 1 0 GMC oxidoreductase Radical_SAM PF04055.21 gi|452211006|ref|YP_007491120.1| - 1.5e-20 74.2 0.1 2.3e-20 73.6 0.1 1.3 1 0 0 1 1 1 1 Radical SAM superfamily CofC PF01983.16 gi|452211007|ref|YP_007491121.1| - 1.1e-48 165.4 0.1 1.3e-48 165.1 0.1 1.0 1 0 0 1 1 1 1 Guanylyl transferase CofC like NTP_transf_3 PF12804.7 gi|452211007|ref|YP_007491121.1| - 0.00022 21.6 0.0 0.00029 21.2 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain DUF2064 PF09837.9 gi|452211007|ref|YP_007491121.1| - 0.018 14.9 0.0 0.029 14.2 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2064) Lzipper-MIP1 PF14389.6 gi|452211007|ref|YP_007491121.1| - 0.11 12.9 0.9 0.21 11.9 0.9 1.4 1 0 0 1 1 1 0 Leucine-zipper of ternary complex factor MIP1 CTP_transf_3 PF02348.19 gi|452211007|ref|YP_007491121.1| - 0.13 12.1 0.1 0.64 9.9 0.0 1.9 2 0 0 2 2 2 0 Cytidylyltransferase TetR_C_3 PF08362.11 gi|452211008|ref|YP_007491122.1| - 0.0012 18.7 0.1 0.0018 18.3 0.1 1.2 1 0 0 1 1 1 1 YcdC-like protein, C-terminal region Cas_Csy3 PF09615.10 gi|452211008|ref|YP_007491122.1| - 0.1 11.9 0.1 0.11 11.8 0.1 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csy3) Fer4 PF00037.27 gi|452211009|ref|YP_007491123.1| - 5e-09 35.6 9.3 7e-07 28.8 7.8 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|452211009|ref|YP_007491123.1| - 4.5e-06 26.5 8.1 4.7e-05 23.3 6.2 2.0 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_7 PF12838.7 gi|452211009|ref|YP_007491123.1| - 1.1e-05 25.9 13.8 0.0016 19.0 1.9 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452211009|ref|YP_007491123.1| - 0.00026 21.9 3.7 0.011 16.6 2.7 2.0 1 1 1 2 2 2 1 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|452211009|ref|YP_007491123.1| - 0.00031 20.8 5.5 0.00053 20.1 5.5 1.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|452211009|ref|YP_007491123.1| - 0.00041 20.4 1.7 0.0007 19.7 1.0 1.7 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452211009|ref|YP_007491123.1| - 0.0017 18.4 2.7 0.0033 17.6 2.7 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452211009|ref|YP_007491123.1| - 0.0043 17.1 3.1 0.0043 17.1 3.1 1.8 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_19 PF06902.11 gi|452211009|ref|YP_007491123.1| - 0.066 13.3 3.1 6 7.0 0.0 2.9 1 1 0 2 2 2 0 Divergent 4Fe-4S mono-cluster Fer4_3 PF12798.7 gi|452211009|ref|YP_007491123.1| - 0.11 13.4 8.7 2.7 9.1 4.1 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_8 PF13183.6 gi|452211009|ref|YP_007491123.1| - 0.12 12.8 1.8 0.12 12.8 1.8 1.6 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|452211009|ref|YP_007491123.1| - 0.2 12.4 9.0 12 6.7 6.8 2.8 2 1 1 3 3 3 0 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|452211009|ref|YP_007491123.1| - 2.4 8.7 8.1 2.1 8.9 6.2 1.8 2 1 1 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I FAD_binding_3 PF01494.19 gi|452211010|ref|YP_007491124.1| - 5.8e-20 71.8 3.6 3.4e-18 66.0 3.6 2.8 1 1 0 1 1 1 1 FAD binding domain FAD_binding_2 PF00890.24 gi|452211010|ref|YP_007491124.1| - 1.2e-11 44.4 0.8 8.2e-08 31.7 0.1 2.3 2 0 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.7 gi|452211010|ref|YP_007491124.1| - 7.2e-10 38.8 3.1 2.3e-09 37.1 3.1 1.7 1 1 0 1 1 1 1 FAD dependent oxidoreductase DAO PF01266.24 gi|452211010|ref|YP_007491124.1| - 9.3e-10 38.6 2.0 0.00074 19.2 0.4 2.1 1 1 0 2 2 2 2 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 gi|452211010|ref|YP_007491124.1| - 1.3e-08 34.3 0.1 6.1e-07 28.8 0.4 2.1 2 0 0 2 2 2 1 Lycopene cyclase protein HI0933_like PF03486.14 gi|452211010|ref|YP_007491124.1| - 5.1e-08 32.0 0.3 1.1e-07 30.9 0.1 1.6 2 0 0 2 2 2 1 HI0933-like protein NAD_binding_8 PF13450.6 gi|452211010|ref|YP_007491124.1| - 3.3e-07 30.4 0.1 1e-06 28.8 0.0 1.9 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|452211010|ref|YP_007491124.1| - 3.6e-07 29.7 5.2 2.7e-06 26.8 0.2 2.9 2 1 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|452211010|ref|YP_007491124.1| - 1.8e-05 24.0 0.9 2.7e-05 23.4 1.0 1.4 1 1 0 1 1 1 1 Glucose inhibited division protein A Trp_halogenase PF04820.14 gi|452211010|ref|YP_007491124.1| - 8.6e-05 21.6 4.2 0.055 12.3 0.2 2.5 2 1 0 3 3 3 2 Tryptophan halogenase Thi4 PF01946.17 gi|452211010|ref|YP_007491124.1| - 0.00029 20.2 0.0 0.00089 18.6 0.0 1.8 1 0 0 1 1 1 1 Thi4 family Pyr_redox_3 PF13738.6 gi|452211010|ref|YP_007491124.1| - 0.0018 17.6 0.2 0.0037 16.6 0.2 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|452211010|ref|YP_007491124.1| - 0.0024 17.2 0.1 0.0038 16.6 0.1 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain 3HCDH_N PF02737.18 gi|452211010|ref|YP_007491124.1| - 0.014 15.3 0.1 0.06 13.2 0.0 2.1 3 0 0 3 3 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox PF00070.27 gi|452211010|ref|YP_007491124.1| - 0.046 14.3 0.1 0.046 14.3 0.1 2.4 3 0 0 3 3 2 0 Pyridine nucleotide-disulphide oxidoreductase SE PF08491.10 gi|452211010|ref|YP_007491124.1| - 0.16 11.0 0.2 0.31 10.0 0.2 1.4 1 0 0 1 1 1 0 Squalene epoxidase TrkH PF02386.16 gi|452211011|ref|YP_007491125.1| - 8.1e-63 212.6 19.3 1.9e-61 208.1 19.3 2.0 1 1 0 1 1 1 1 Cation transport protein YniB PF14002.6 gi|452211011|ref|YP_007491125.1| - 0.096 12.4 0.4 0.096 12.4 0.4 2.5 3 0 0 3 3 3 0 YniB-like protein TrkA_N PF02254.18 gi|452211012|ref|YP_007491126.1| - 1.2e-46 157.7 8.3 6.2e-26 90.9 0.8 2.3 2 0 0 2 2 2 2 TrkA-N domain TrkA_C PF02080.21 gi|452211012|ref|YP_007491126.1| - 6.1e-32 109.3 3.7 4.4e-15 55.3 0.2 3.3 3 0 0 3 3 3 2 TrkA-C domain NAD_binding_7 PF13241.6 gi|452211012|ref|YP_007491126.1| - 8.8e-08 32.5 3.1 0.0044 17.4 0.1 2.5 2 0 0 2 2 2 2 Putative NAD(P)-binding Shikimate_DH PF01488.20 gi|452211012|ref|YP_007491126.1| - 2.3e-06 27.7 3.3 0.004 17.2 0.2 2.6 2 1 0 2 2 2 2 Shikimate / quinate 5-dehydrogenase AlaDh_PNT_C PF01262.21 gi|452211012|ref|YP_007491126.1| - 5.5e-06 25.8 3.2 0.0029 16.9 1.4 2.3 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain Sacchrp_dh_NADP PF03435.18 gi|452211012|ref|YP_007491126.1| - 0.00026 21.2 5.4 0.12 12.7 1.0 2.9 2 1 1 3 3 3 2 Saccharopine dehydrogenase NADP binding domain NAD_binding_10 PF13460.6 gi|452211012|ref|YP_007491126.1| - 0.00082 19.3 2.5 0.042 13.7 0.5 2.3 2 0 0 2 2 2 1 NAD(P)H-binding Pyr_redox_2 PF07992.14 gi|452211012|ref|YP_007491126.1| - 0.0032 16.8 0.9 1.2 8.3 0.1 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase RE_BsaWI PF18643.1 gi|452211012|ref|YP_007491126.1| - 0.0093 15.9 1.3 3.5 7.6 0.0 3.0 3 0 0 3 3 3 1 BsaWI restriction endonuclease type 2 Pyr_redox PF00070.27 gi|452211012|ref|YP_007491126.1| - 0.024 15.2 2.7 0.28 11.8 0.2 3.1 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase UDPG_MGDP_dh_N PF03721.14 gi|452211012|ref|YP_007491126.1| - 0.024 14.2 0.9 0.19 11.3 0.2 2.7 3 0 0 3 3 3 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 gi|452211012|ref|YP_007491126.1| - 0.028 14.1 0.1 4.9 6.8 0.0 2.4 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA THF_DHG_CYH_C PF02882.19 gi|452211012|ref|YP_007491126.1| - 0.044 13.1 3.2 1.1 8.5 0.0 3.0 3 1 0 3 3 3 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 3HCDH_N PF02737.18 gi|452211012|ref|YP_007491126.1| - 0.085 12.7 1.0 0.3 11.0 0.1 2.3 3 0 0 3 3 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DUF4748 PF15932.5 gi|452211012|ref|YP_007491126.1| - 0.094 12.5 0.0 0.21 11.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4748) DAO PF01266.24 gi|452211012|ref|YP_007491126.1| - 0.18 11.4 0.1 0.18 11.4 0.1 1.6 2 0 0 2 2 2 0 FAD dependent oxidoreductase ThiF PF00899.21 gi|452211012|ref|YP_007491126.1| - 1.9 7.7 4.8 32 3.8 0.1 3.2 2 1 1 3 3 3 0 ThiF family TrkH PF02386.16 gi|452211013|ref|YP_007491127.1| - 5.2e-60 203.3 19.6 6e-59 199.8 19.6 1.9 1 1 0 1 1 1 1 Cation transport protein Form-deh_trans PF09163.11 gi|452211013|ref|YP_007491127.1| - 5.1 7.0 5.6 13 5.7 0.6 3.4 3 0 0 3 3 3 0 Formate dehydrogenase N, transmembrane TrkA_N PF02254.18 gi|452211014|ref|YP_007491128.1| - 1.3e-49 167.3 7.5 9.7e-27 93.5 0.4 2.3 2 0 0 2 2 2 2 TrkA-N domain TrkA_C PF02080.21 gi|452211014|ref|YP_007491128.1| - 1.3e-32 111.4 0.8 3.6e-15 55.5 0.0 3.5 3 0 0 3 3 3 2 TrkA-C domain NAD_binding_7 PF13241.6 gi|452211014|ref|YP_007491128.1| - 2.6e-08 34.3 5.0 0.0015 18.9 1.1 2.5 2 0 0 2 2 2 2 Putative NAD(P)-binding Shikimate_DH PF01488.20 gi|452211014|ref|YP_007491128.1| - 4.2e-08 33.3 4.7 0.00023 21.2 0.7 2.5 2 0 0 2 2 2 2 Shikimate / quinate 5-dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|452211014|ref|YP_007491128.1| - 7.7e-08 32.7 4.2 0.0013 19.0 0.5 3.2 2 1 2 4 4 4 2 Saccharopine dehydrogenase NADP binding domain AlaDh_PNT_C PF01262.21 gi|452211014|ref|YP_007491128.1| - 8.5e-06 25.2 4.6 0.0023 17.3 2.4 2.2 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain F420_oxidored PF03807.17 gi|452211014|ref|YP_007491128.1| - 3.1e-05 24.5 2.4 0.061 13.9 0.2 3.4 2 1 1 3 3 3 2 NADP oxidoreductase coenzyme F420-dependent ApbA PF02558.16 gi|452211014|ref|YP_007491128.1| - 0.00016 21.3 0.2 0.31 10.7 0.0 2.5 2 0 0 2 2 2 2 Ketopantoate reductase PanE/ApbA DUF1188 PF06690.11 gi|452211014|ref|YP_007491128.1| - 0.0004 20.0 3.7 0.008 15.8 0.2 2.5 3 0 0 3 3 3 1 Protein of unknown function (DUF1188) NAD_binding_10 PF13460.6 gi|452211014|ref|YP_007491128.1| - 0.00042 20.3 1.6 0.11 12.4 0.3 2.5 2 0 0 2 2 2 2 NAD(P)H-binding NAD_binding_8 PF13450.6 gi|452211014|ref|YP_007491128.1| - 0.0013 19.0 0.0 1.3 9.3 0.0 2.5 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain NAD_Gly3P_dh_N PF01210.23 gi|452211014|ref|YP_007491128.1| - 0.0049 16.8 0.4 2 8.4 0.2 2.9 2 1 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ThiF PF00899.21 gi|452211014|ref|YP_007491128.1| - 0.0074 15.7 1.0 1.5 8.1 0.0 3.2 2 1 1 3 3 3 1 ThiF family DAO PF01266.24 gi|452211014|ref|YP_007491128.1| - 0.0092 15.6 0.0 0.031 13.9 0.0 1.8 2 0 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|452211014|ref|YP_007491128.1| - 0.017 14.4 1.2 2.4 7.3 0.2 2.2 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Castor_Poll_mid PF06241.12 gi|452211014|ref|YP_007491128.1| - 0.019 14.9 0.2 12 5.9 0.0 2.9 3 0 0 3 3 2 0 Castor and Pollux, part of voltage-gated ion channel UDPG_MGDP_dh_N PF03721.14 gi|452211014|ref|YP_007491128.1| - 0.025 14.1 0.6 0.29 10.7 0.1 2.8 3 1 0 4 4 4 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3HCDH_N PF02737.18 gi|452211014|ref|YP_007491128.1| - 0.027 14.4 0.9 0.15 11.9 0.1 2.5 3 0 0 3 3 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NmrA PF05368.13 gi|452211014|ref|YP_007491128.1| - 0.042 13.4 1.7 0.068 12.7 0.7 1.8 2 0 0 2 2 2 0 NmrA-like family GFO_IDH_MocA PF01408.22 gi|452211014|ref|YP_007491128.1| - 0.071 13.9 0.2 5.7 7.8 0.1 2.5 2 0 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold AdoHcyase_NAD PF00670.21 gi|452211014|ref|YP_007491128.1| - 0.089 12.9 2.8 0.3 11.1 0.9 2.4 2 0 0 2 2 2 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FAD_binding_3 PF01494.19 gi|452211014|ref|YP_007491128.1| - 0.1 11.8 0.0 0.92 8.7 0.0 2.1 2 0 0 2 2 2 0 FAD binding domain RNase_PH_C PF03725.15 gi|452211014|ref|YP_007491128.1| - 0.13 12.3 1.5 15 5.7 0.1 2.9 2 0 0 2 2 2 0 3' exoribonuclease family, domain 2 RE_BsaWI PF18643.1 gi|452211014|ref|YP_007491128.1| - 0.4 10.6 3.0 40 4.2 0.1 4.1 4 1 0 4 4 4 0 BsaWI restriction endonuclease type 2 DnaJ_C PF01556.18 gi|452211016|ref|YP_007491130.1| - 3.9e-38 130.9 0.0 5.1e-38 130.5 0.0 1.2 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 gi|452211016|ref|YP_007491130.1| - 4.6e-28 97.1 2.7 4.6e-28 97.1 2.7 2.0 2 0 0 2 2 2 1 DnaJ domain DnaJ_CXXCXGXG PF00684.19 gi|452211016|ref|YP_007491130.1| - 1.6e-14 54.0 16.9 3.1e-14 53.1 16.9 1.5 1 0 0 1 1 1 1 DnaJ central domain Anti-TRAP PF15777.5 gi|452211016|ref|YP_007491130.1| - 1.4e-05 25.0 17.4 0.0021 18.0 4.8 2.9 1 1 2 3 3 3 3 Tryptophan RNA-binding attenuator protein inhibitory protein Prim_Zn_Ribbon PF08273.12 gi|452211016|ref|YP_007491130.1| - 0.007 16.6 14.7 0.012 15.9 2.1 3.2 3 0 0 3 3 3 2 Zinc-binding domain of primase-helicase Ogr_Delta PF04606.12 gi|452211016|ref|YP_007491130.1| - 0.027 14.4 9.2 1.3 9.1 2.5 2.7 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger HypA PF01155.19 gi|452211016|ref|YP_007491130.1| - 0.48 10.5 10.0 2.3 8.2 1.4 2.3 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Lar_restr_allev PF14354.6 gi|452211016|ref|YP_007491130.1| - 1.3 9.5 5.9 4.7 7.7 0.8 2.5 1 1 1 2 2 2 0 Restriction alleviation protein Lar zf_Rg PF17915.1 gi|452211016|ref|YP_007491130.1| - 2 7.9 8.9 25 4.4 0.1 2.8 2 1 0 2 2 2 0 Reverse gyrase zinc finger FdhE PF04216.12 gi|452211016|ref|YP_007491130.1| - 2.9 7.7 5.3 5.8 6.7 5.3 1.4 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation zf-C3HC4_3 PF13920.6 gi|452211016|ref|YP_007491130.1| - 3.2 7.7 6.1 14 5.7 0.4 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) TackOD1 PF18551.1 gi|452211016|ref|YP_007491130.1| - 8.4 6.0 6.9 8.5 6.0 1.6 2.3 1 1 1 2 2 2 0 Thaumarchaeal output domain 1 HSP70 PF00012.20 gi|452211017|ref|YP_007491131.1| - 2e-253 842.0 13.7 2.6e-251 835.1 13.7 2.0 1 1 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 gi|452211017|ref|YP_007491131.1| - 2.8e-17 62.5 2.3 2.8e-17 62.5 2.3 2.5 2 1 0 2 2 2 1 MreB/Mbl protein FtsA PF14450.6 gi|452211017|ref|YP_007491131.1| - 1.6e-05 25.3 1.7 0.42 11.0 0.2 3.4 3 1 0 3 3 3 2 Cell division protein FtsA FGGY_C PF02782.16 gi|452211017|ref|YP_007491131.1| - 4.2e-05 23.4 0.0 0.0001 22.1 0.0 1.6 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain BcrAD_BadFG PF01869.20 gi|452211017|ref|YP_007491131.1| - 0.0092 15.5 3.6 1.4 8.3 0.0 2.8 3 1 0 3 3 3 2 BadF/BadG/BcrA/BcrD ATPase family Big_3_3 PF13750.6 gi|452211017|ref|YP_007491131.1| - 0.097 12.3 0.0 0.29 10.8 0.0 1.8 1 0 0 1 1 1 0 Bacterial Ig-like domain (group 3) DUF3347 PF11827.8 gi|452211017|ref|YP_007491131.1| - 0.12 12.6 7.1 0.45 10.7 5.6 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3347) DUF1090 PF06476.12 gi|452211017|ref|YP_007491131.1| - 0.48 10.6 11.0 1.5 9.0 11.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1090) Phage_connect_1 PF05135.13 gi|452211017|ref|YP_007491131.1| - 2.7 8.6 7.8 6.5 7.3 0.1 3.6 3 1 0 3 3 3 0 Phage gp6-like head-tail connector protein Vfa1 PF08432.10 gi|452211017|ref|YP_007491131.1| - 3.1 8.1 8.0 6 7.1 8.0 1.4 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 DDE_Tnp_1 PF01609.21 gi|452211018|ref|YP_007491132.1| - 1.1e-12 48.1 1.3 1.4e-12 47.7 1.3 1.2 1 0 0 1 1 1 1 Transposase DDE domain BCNT PF07572.12 gi|452211018|ref|YP_007491132.1| - 0.0024 17.9 0.8 1.4 9.0 0.1 3.2 3 0 0 3 3 3 2 Bucentaur or craniofacial development DDE_Tnp_1_4 PF13701.6 gi|452211018|ref|YP_007491132.1| - 0.012 13.9 1.4 0.034 12.4 1.4 1.7 1 1 0 1 1 1 0 Transposase DDE domain group 1 Tn7_Tnp_TnsA_C PF08721.11 gi|452211018|ref|YP_007491132.1| - 0.097 13.3 0.2 0.38 11.4 0.1 2.0 2 0 0 2 2 2 0 TnsA endonuclease C terminal ATP-grasp_3 PF02655.14 gi|452211019|ref|YP_007491133.1| - 6.2e-42 143.4 0.0 8.3e-42 143.0 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain preATP-grasp_3 PF18301.1 gi|452211019|ref|YP_007491133.1| - 0.00011 22.3 0.0 0.00022 21.4 0.0 1.5 1 0 0 1 1 1 1 pre ATP-grasp 3 domain ATPgrasp_ST PF14397.6 gi|452211019|ref|YP_007491133.1| - 0.00016 21.0 0.0 0.0048 16.2 0.0 2.2 2 0 0 2 2 2 1 Sugar-transfer associated ATP-grasp Rossmann-like PF10727.9 gi|452211019|ref|YP_007491133.1| - 0.055 13.3 0.0 0.099 12.5 0.0 1.3 1 0 0 1 1 1 0 Rossmann-like domain Dala_Dala_lig_C PF07478.13 gi|452211019|ref|YP_007491133.1| - 0.11 12.0 0.0 0.33 10.5 0.0 1.8 2 0 0 2 2 2 0 D-ala D-ala ligase C-terminus ATPgrasp_Ter PF15632.6 gi|452211019|ref|YP_007491133.1| - 0.13 12.0 0.0 0.41 10.4 0.0 1.9 2 1 0 2 2 2 0 ATP-grasp in the biosynthetic pathway with Ter operon Hydantoinase_A PF01968.18 gi|452211020|ref|YP_007491134.1| - 5.4e-38 130.9 0.8 4.2e-37 128.0 0.1 1.9 2 0 0 2 2 2 1 Hydantoinase/oxoprolinase MutL PF13941.6 gi|452211020|ref|YP_007491134.1| - 6.6e-05 21.7 0.1 0.0075 14.9 0.0 2.3 2 1 0 2 2 2 2 MutL protein Hydant_A_N PF05378.13 gi|452211020|ref|YP_007491134.1| - 5.1 6.8 9.8 19 4.9 0.8 3.5 2 2 0 3 3 3 0 Hydantoinase/oxoprolinase N-terminal region Peptidase_C5 PF00770.18 gi|452211021|ref|YP_007491135.1| - 0.1 12.2 0.0 0.12 12.1 0.0 1.2 1 0 0 1 1 1 0 Adenovirus endoprotease DUF1610 PF07754.11 gi|452211022|ref|YP_007491136.1| - 6e-11 42.1 17.7 1.1e-10 41.3 2.1 3.0 2 1 0 2 2 2 1 Domain of unknown function (DUF1610) zinc_ribbon_2 PF13240.6 gi|452211022|ref|YP_007491136.1| - 0.00028 20.5 19.9 0.0065 16.1 5.0 3.6 2 2 1 3 3 3 2 zinc-ribbon domain DZR PF12773.7 gi|452211022|ref|YP_007491136.1| - 0.00096 19.1 12.6 0.24 11.5 12.6 2.4 1 1 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|452211022|ref|YP_007491136.1| - 0.0044 16.4 15.3 1.1 8.7 0.6 3.7 3 1 0 3 3 3 1 zinc-ribbon domain tRNA-synt_1g PF09334.11 gi|452211022|ref|YP_007491136.1| - 0.0085 14.9 3.5 0.0093 14.7 3.5 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (M) OrfB_Zn_ribbon PF07282.11 gi|452211022|ref|YP_007491136.1| - 0.0087 16.0 10.3 0.015 15.2 6.0 2.1 1 1 1 2 2 2 2 Putative transposase DNA-binding domain zf_C2H2_10 PF18414.1 gi|452211022|ref|YP_007491136.1| - 0.013 15.0 8.0 0.063 12.8 1.3 2.5 2 0 0 2 2 2 0 C2H2 type zinc-finger DUF2039 PF10217.9 gi|452211022|ref|YP_007491136.1| - 0.016 15.6 3.7 0.016 15.6 3.7 1.7 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2039) HypA PF01155.19 gi|452211022|ref|YP_007491136.1| - 0.021 14.8 11.2 0.089 12.8 0.6 2.0 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf_UBZ PF18439.1 gi|452211022|ref|YP_007491136.1| - 0.027 14.1 2.2 0.44 10.2 0.2 3.4 3 1 1 4 4 4 0 Ubiquitin-Binding Zinc Finger Rhodanese_C PF12368.8 gi|452211022|ref|YP_007491136.1| - 0.034 14.5 7.2 0.038 14.4 7.2 1.1 1 0 0 1 1 1 0 Rhodanase C-terminal Auto_anti-p27 PF06677.12 gi|452211022|ref|YP_007491136.1| - 0.039 14.1 1.7 0.039 14.1 1.7 2.6 2 1 1 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-tcix PF14952.6 gi|452211022|ref|YP_007491136.1| - 0.043 13.4 17.8 0.32 10.7 5.0 3.1 2 1 1 3 3 3 0 Putative treble-clef, zinc-finger, Zn-binding zf-RING_7 PF02591.15 gi|452211022|ref|YP_007491136.1| - 0.046 13.9 14.2 6.5 7.0 0.2 3.8 3 1 0 3 3 3 0 C4-type zinc ribbon domain zf-C4_Topoisom PF01396.19 gi|452211022|ref|YP_007491136.1| - 0.073 12.9 12.7 2.7 7.8 0.4 3.6 2 1 2 4 4 4 0 Topoisomerase DNA binding C4 zinc finger Zn_Tnp_IS91 PF14319.6 gi|452211022|ref|YP_007491136.1| - 0.08 13.0 9.6 0.16 12.0 9.6 1.5 1 1 0 1 1 1 0 Transposase zinc-binding domain zinc-ribbons_6 PF07191.12 gi|452211022|ref|YP_007491136.1| - 0.089 12.8 9.8 0.72 9.9 9.8 2.0 1 1 0 1 1 1 0 zinc-ribbons C1_2 PF03107.16 gi|452211022|ref|YP_007491136.1| - 0.098 13.0 11.4 0.11 12.8 5.4 2.2 1 1 1 2 2 2 0 C1 domain zf-Mss51 PF13824.6 gi|452211022|ref|YP_007491136.1| - 0.12 12.5 12.6 3.6 7.8 6.2 2.6 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-CHY PF05495.12 gi|452211022|ref|YP_007491136.1| - 0.16 12.5 11.3 1.1 9.8 6.9 2.1 1 1 1 2 2 2 0 CHY zinc finger Zn_ribbon_SprT PF17283.2 gi|452211022|ref|YP_007491136.1| - 0.16 11.9 16.8 2.7 8.0 0.3 4.0 3 1 1 4 4 4 0 SprT-like zinc ribbon domain NRDD PF13597.6 gi|452211022|ref|YP_007491136.1| - 0.19 10.5 12.4 0.55 8.9 1.0 2.0 1 1 1 2 2 2 0 Anaerobic ribonucleoside-triphosphate reductase zf-UBP PF02148.19 gi|452211022|ref|YP_007491136.1| - 0.19 12.1 1.6 0.19 12.1 1.6 2.2 2 1 0 2 2 2 0 Zn-finger in ubiquitin-hydrolases and other protein zf-HIT PF04438.16 gi|452211022|ref|YP_007491136.1| - 0.27 11.2 15.0 0.47 10.4 5.0 3.0 2 1 0 2 2 2 0 HIT zinc finger zf-C3HC4_4 PF15227.6 gi|452211022|ref|YP_007491136.1| - 0.27 11.4 9.6 0.26 11.5 1.1 2.3 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING Rubredoxin_2 PF18073.1 gi|452211022|ref|YP_007491136.1| - 0.3 10.8 15.9 2.8 7.7 0.1 4.0 3 1 0 3 3 3 0 Rubredoxin metal binding domain zf-C2HC5 PF06221.13 gi|452211022|ref|YP_007491136.1| - 0.33 11.0 10.5 0.22 11.5 2.6 2.4 1 1 1 2 2 2 0 Putative zinc finger motif, C2HC5-type Nudix_N_2 PF14803.6 gi|452211022|ref|YP_007491136.1| - 0.35 10.8 14.9 4.7 7.2 0.1 3.9 3 1 1 4 4 4 0 Nudix N-terminal DNA_RNApol_7kD PF03604.13 gi|452211022|ref|YP_007491136.1| - 0.39 10.4 13.0 2.4 7.9 0.1 3.8 2 1 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit zf-HYPF PF07503.12 gi|452211022|ref|YP_007491136.1| - 0.4 10.5 12.8 5.7 6.8 0.1 2.6 2 1 0 2 2 2 0 HypF finger zf-TFIIB PF13453.6 gi|452211022|ref|YP_007491136.1| - 0.46 9.9 14.3 6 6.3 10.6 2.7 2 1 0 2 2 2 0 Transcription factor zinc-finger PolC_DP2 PF03833.13 gi|452211022|ref|YP_007491136.1| - 0.57 8.0 6.0 0.6 7.9 6.0 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 zf-ACC PF17848.1 gi|452211022|ref|YP_007491136.1| - 0.73 10.0 17.5 11 6.2 0.2 4.0 3 1 0 3 3 3 0 Acetyl-coA carboxylase zinc finger domain zf-C3HC4 PF00097.25 gi|452211022|ref|YP_007491136.1| - 0.89 9.5 12.4 0.25 11.3 1.8 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zinc_ribbon_10 PF10058.9 gi|452211022|ref|YP_007491136.1| - 1.1 9.1 14.3 3.6 7.4 2.5 3.4 1 1 2 3 3 3 0 Predicted integral membrane zinc-ribbon metal-binding protein C1_1 PF00130.22 gi|452211022|ref|YP_007491136.1| - 1.2 9.1 10.1 0.22 11.5 0.6 2.3 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-LITAF-like PF10601.9 gi|452211022|ref|YP_007491136.1| - 1.3 9.3 13.3 3.6 7.9 0.3 3.6 1 1 2 3 3 3 0 LITAF-like zinc ribbon domain NMD3 PF04981.13 gi|452211022|ref|YP_007491136.1| - 1.5 8.2 9.7 1.9 7.9 9.7 1.1 1 0 0 1 1 1 0 NMD3 family Zn-ribbon_8 PF09723.10 gi|452211022|ref|YP_007491136.1| - 2.6 8.3 18.0 24 5.2 0.1 3.6 1 1 2 3 3 3 0 Zinc ribbon domain A2L_zn_ribbon PF08792.10 gi|452211022|ref|YP_007491136.1| - 3 7.7 12.9 3 7.7 2.2 3.6 3 1 0 3 3 3 0 A2L zinc ribbon domain PknG_rubred PF16919.5 gi|452211022|ref|YP_007491136.1| - 3.8 7.7 12.7 0.36 11.0 7.4 1.8 1 1 1 2 2 2 0 Protein kinase G rubredoxin domain CpXC PF14353.6 gi|452211022|ref|YP_007491136.1| - 4.8 7.2 11.7 7 6.7 1.3 2.7 1 1 2 3 3 3 0 CpXC protein zf-trcl PF13451.6 gi|452211022|ref|YP_007491136.1| - 5.9 6.9 15.2 4.5 7.3 1.1 3.8 2 1 2 4 4 4 0 Probable zinc-ribbon domain YhfH PF14149.6 gi|452211022|ref|YP_007491136.1| - 5.9 7.0 14.2 23 5.1 0.1 3.6 3 1 0 3 3 3 0 YhfH-like protein PhnA_Zn_Ribbon PF08274.12 gi|452211022|ref|YP_007491136.1| - 6.9 6.7 12.6 0.99 9.4 6.5 2.6 2 1 0 2 2 1 0 PhnA Zinc-Ribbon EF1_GNE PF00736.19 gi|452211023|ref|YP_007491137.1| - 1.4e-18 66.8 0.2 1.6e-18 66.7 0.2 1.0 1 0 0 1 1 1 1 EF-1 guanine nucleotide exchange domain PAS_3 PF08447.12 gi|452211024|ref|YP_007491138.1| - 4.5e-94 308.9 14.9 6.1e-25 87.3 0.4 5.6 5 0 0 5 5 5 5 PAS fold PAS_9 PF13426.7 gi|452211024|ref|YP_007491138.1| - 1.5e-36 124.8 2.8 7.5e-07 29.4 0.0 6.6 6 0 0 6 6 6 4 PAS domain PAS PF00989.25 gi|452211024|ref|YP_007491138.1| - 9.9e-32 109.3 0.3 1.3e-07 31.6 0.0 6.8 6 0 0 6 6 6 5 PAS fold HisKA_2 PF07568.12 gi|452211024|ref|YP_007491138.1| - 1.4e-31 108.4 8.9 3.2e-31 107.2 4.3 3.3 3 0 0 3 3 3 1 Histidine kinase PAS_4 PF08448.10 gi|452211024|ref|YP_007491138.1| - 3.3e-22 78.8 0.0 6.6e-11 42.4 0.0 4.9 4 0 0 4 4 4 4 PAS fold PAS_11 PF14598.6 gi|452211024|ref|YP_007491138.1| - 2.1e-10 40.7 0.0 0.016 15.3 0.0 5.3 5 0 0 5 5 5 2 PAS domain HATPase_c PF02518.26 gi|452211024|ref|YP_007491138.1| - 9.8e-09 35.7 0.2 1.4e-07 32.0 0.1 2.7 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HWE_HK PF07536.14 gi|452211024|ref|YP_007491138.1| - 6.9e-05 23.5 0.4 0.00018 22.2 0.4 1.7 1 0 0 1 1 1 1 HWE histidine kinase YcgL PF05166.13 gi|452211024|ref|YP_007491138.1| - 0.0001 22.6 2.3 7.4 7.0 0.1 4.0 3 0 0 3 3 3 2 YcgL domain PAS_8 PF13188.7 gi|452211024|ref|YP_007491138.1| - 0.00059 19.8 0.1 0.96 9.5 0.0 4.7 5 0 0 5 5 5 1 PAS domain PAS_6 PF08348.11 gi|452211024|ref|YP_007491138.1| - 0.0049 16.7 0.1 0.063 13.1 0.0 2.8 3 0 0 3 3 3 1 YheO-like PAS domain Nit_Regul_Hom PF10126.9 gi|452211024|ref|YP_007491138.1| - 0.008 16.2 0.3 0.32 11.1 0.0 3.2 3 0 0 3 3 3 1 Uncharacterized protein, homolog of nitrogen regulatory protein PII CCDC32 PF14989.6 gi|452211024|ref|YP_007491138.1| - 0.13 12.2 2.9 30 4.6 0.1 3.7 4 0 0 4 4 4 0 Coiled-coil domain containing 32 AF0941-like PF14591.6 gi|452211024|ref|YP_007491138.1| - 0.16 12.6 0.2 0.16 12.6 0.2 2.6 3 0 0 3 3 2 0 AF0941-like RICH PF05062.12 gi|452211024|ref|YP_007491138.1| - 0.35 11.3 3.4 23 5.4 1.5 3.0 1 1 1 2 2 2 0 RICH domain STN1_2 PF09170.10 gi|452211024|ref|YP_007491138.1| - 0.36 11.0 4.1 2.3 8.4 0.0 2.5 2 0 0 2 2 2 0 CST, Suppressor of cdc thirteen homolog, complex subunit STN1 Response_reg PF00072.24 gi|452211025|ref|YP_007491139.1| - 1.4e-23 83.2 0.2 1.7e-23 82.9 0.2 1.1 1 0 0 1 1 1 1 Response regulator receiver domain ThiI PF02568.14 gi|452211027|ref|YP_007491141.1| - 2.6e-53 180.5 0.0 3.7e-53 180.1 0.0 1.2 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) THUMP PF02926.17 gi|452211027|ref|YP_007491141.1| - 8e-16 58.4 0.0 2.9e-15 56.6 0.0 2.0 2 0 0 2 2 2 1 THUMP domain QueC PF06508.13 gi|452211027|ref|YP_007491141.1| - 1.3e-05 24.9 0.0 0.017 14.6 0.0 2.3 2 0 0 2 2 2 2 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.16 gi|452211027|ref|YP_007491141.1| - 0.00033 19.6 0.0 0.00067 18.5 0.0 1.5 2 0 0 2 2 2 1 tRNA methyl transferase PAS_9 PF13426.7 gi|452211029|ref|YP_007491143.1| - 5.6e-31 106.9 0.9 4.4e-16 59.0 0.2 3.7 3 0 0 3 3 3 3 PAS domain PAS PF00989.25 gi|452211029|ref|YP_007491143.1| - 1e-29 102.8 0.0 2e-11 43.9 0.0 3.6 3 0 0 3 3 3 3 PAS fold HATPase_c PF02518.26 gi|452211029|ref|YP_007491143.1| - 2.5e-26 92.4 0.2 5.1e-26 91.4 0.2 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.7 gi|452211029|ref|YP_007491143.1| - 3.7e-25 87.5 0.1 5.2e-09 35.9 0.0 3.8 3 1 0 3 3 3 3 PAS domain Response_reg PF00072.24 gi|452211029|ref|YP_007491143.1| - 3e-19 69.2 0.0 2.2e-18 66.4 0.0 2.5 3 0 0 3 3 3 1 Response regulator receiver domain HisKA PF00512.25 gi|452211029|ref|YP_007491143.1| - 1.3e-15 57.1 0.1 5.5e-15 55.1 0.0 2.1 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_4 PF08448.10 gi|452211029|ref|YP_007491143.1| - 2.6e-15 56.6 0.0 2.1e-05 24.7 0.0 3.6 3 0 0 3 3 3 3 PAS fold PAS_3 PF08447.12 gi|452211029|ref|YP_007491143.1| - 1.2e-07 31.9 0.0 0.12 12.6 0.0 3.6 3 0 0 3 3 3 2 PAS fold PAS_7 PF12860.7 gi|452211029|ref|YP_007491143.1| - 0.00071 19.7 0.6 1.5 9.1 0.0 4.0 4 1 0 4 4 4 2 PAS fold HATPase_c_3 PF13589.6 gi|452211029|ref|YP_007491143.1| - 0.0038 17.0 0.1 0.0094 15.8 0.1 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Cyclase_polyket PF04673.12 gi|452211029|ref|YP_007491143.1| - 0.11 12.8 0.0 0.37 11.1 0.0 1.9 1 0 0 1 1 1 0 Polyketide synthesis cyclase MMR_HSR1 PF01926.23 gi|452211031|ref|YP_007491145.1| - 6.4e-18 64.9 0.5 9.4e-14 51.5 0.0 2.2 2 0 0 2 2 2 2 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|452211031|ref|YP_007491145.1| - 1e-10 41.3 1.1 0.00028 20.4 0.2 2.3 2 0 0 2 2 2 2 Ferrous iron transport protein B RsgA_GTPase PF03193.16 gi|452211031|ref|YP_007491145.1| - 3.4e-10 40.1 0.1 6.3e-10 39.2 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase GTP_EFTU PF00009.27 gi|452211031|ref|YP_007491145.1| - 5.6e-06 26.0 2.2 0.0001 21.9 0.2 2.4 1 1 0 2 2 2 1 Elongation factor Tu GTP binding domain MMR_HSR1_Xtn PF16897.5 gi|452211031|ref|YP_007491145.1| - 0.00015 21.7 0.1 0.00041 20.3 0.1 1.7 1 1 0 1 1 1 1 C-terminal region of MMR_HSR1 domain AIG1 PF04548.16 gi|452211031|ref|YP_007491145.1| - 0.00096 18.5 0.0 0.0019 17.6 0.0 1.5 1 0 0 1 1 1 1 AIG1 family Dynamin_N PF00350.23 gi|452211031|ref|YP_007491145.1| - 0.0016 18.5 2.3 3.3 7.7 0.1 3.2 2 1 1 3 3 3 2 Dynamin family cobW PF02492.19 gi|452211031|ref|YP_007491145.1| - 0.002 17.8 0.4 0.002 17.8 0.4 1.7 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 gi|452211031|ref|YP_007491145.1| - 0.075 12.0 2.4 0.32 10.0 0.2 2.3 1 1 1 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB ATP_bind_1 PF03029.17 gi|452211031|ref|YP_007491145.1| - 0.081 12.7 0.3 0.2 11.4 0.0 1.8 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein Poty_PP PF08440.10 gi|452211031|ref|YP_007491145.1| - 0.14 11.2 0.0 0.22 10.6 0.0 1.3 1 0 0 1 1 1 0 Potyviridae polyprotein XhlA PF10779.9 gi|452211032|ref|YP_007491146.1| - 0.0024 18.0 2.0 0.0029 17.8 2.0 1.1 1 0 0 1 1 1 1 Haemolysin XhlA Lip_prot_lig_C PF10437.9 gi|452211032|ref|YP_007491146.1| - 0.0047 16.9 0.2 0.0051 16.8 0.2 1.1 1 0 0 1 1 1 1 Bacterial lipoate protein ligase C-terminus Rx_N PF18052.1 gi|452211032|ref|YP_007491146.1| - 0.0049 17.1 0.2 0.0057 16.9 0.2 1.0 1 0 0 1 1 1 1 Rx N-terminal domain CENP-Q PF13094.6 gi|452211032|ref|YP_007491146.1| - 0.0084 16.3 0.5 0.009 16.2 0.5 1.0 1 0 0 1 1 1 1 CENP-Q, a CENPA-CAD centromere complex subunit BLOC1_2 PF10046.9 gi|452211032|ref|YP_007491146.1| - 0.0097 16.2 1.0 0.011 16.0 1.0 1.1 1 0 0 1 1 1 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 ABC_tran_CTD PF16326.5 gi|452211032|ref|YP_007491146.1| - 0.012 15.8 0.4 0.014 15.6 0.4 1.2 1 0 0 1 1 1 0 ABC transporter C-terminal domain COG6 PF06419.11 gi|452211032|ref|YP_007491146.1| - 0.029 12.6 0.7 0.031 12.5 0.7 1.0 1 0 0 1 1 1 0 Conserved oligomeric complex COG6 HSBP1 PF06825.12 gi|452211032|ref|YP_007491146.1| - 0.043 13.7 1.7 0.059 13.2 1.6 1.4 1 1 0 1 1 1 0 Heat shock factor binding protein 1 YabA PF06156.13 gi|452211032|ref|YP_007491146.1| - 0.045 14.4 0.4 0.045 14.4 0.4 1.1 1 0 0 1 1 1 0 Initiation control protein YabA DUF4391 PF14335.6 gi|452211032|ref|YP_007491146.1| - 0.069 12.9 1.2 0.072 12.8 1.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4391) FlaC_arch PF05377.11 gi|452211032|ref|YP_007491146.1| - 0.074 13.5 2.5 0.1 13.0 2.5 1.2 1 0 0 1 1 1 0 Flagella accessory protein C (FlaC) NPV_P10 PF05531.12 gi|452211032|ref|YP_007491146.1| - 0.082 13.4 0.5 0.097 13.1 0.5 1.2 1 0 0 1 1 1 0 Nucleopolyhedrovirus P10 protein MetOD2 PF18548.1 gi|452211032|ref|YP_007491146.1| - 0.088 12.9 2.2 0.097 12.8 2.2 1.1 1 0 0 1 1 1 0 Metanogen output domain 2 DUF1664 PF07889.12 gi|452211032|ref|YP_007491146.1| - 0.11 12.5 0.5 0.13 12.3 0.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) Pput2613-deam PF14427.6 gi|452211033|ref|YP_007491147.1| - 0.011 15.6 0.4 0.02 14.8 0.4 1.4 1 1 0 1 1 1 0 Pput_2613-like deaminase Usp PF00582.26 gi|452211035|ref|YP_007491149.1| - 3.4e-37 128.1 0.0 4e-37 127.9 0.0 1.0 1 0 0 1 1 1 1 Universal stress protein family TPD52 PF04201.15 gi|452211037|ref|YP_007491151.1| - 0.055 13.1 0.7 0.085 12.5 0.7 1.3 1 1 0 1 1 1 0 Tumour protein D52 family PspA_IM30 PF04012.12 gi|452211038|ref|YP_007491152.1| - 1.8e-24 86.6 32.2 2.1e-24 86.4 32.2 1.0 1 0 0 1 1 1 1 PspA/IM30 family NOG1 PF06858.14 gi|452211038|ref|YP_007491152.1| - 0.0026 17.5 0.1 0.0099 15.6 0.0 2.1 2 0 0 2 2 2 1 Nucleolar GTP-binding protein 1 (NOG1) Flagellin_C PF00700.21 gi|452211038|ref|YP_007491152.1| - 0.0092 16.3 10.5 0.24 11.8 0.1 3.4 1 1 2 3 3 3 2 Bacterial flagellin C-terminal helical region Osmo_CC PF08946.10 gi|452211038|ref|YP_007491152.1| - 0.018 15.3 2.8 0.018 15.3 2.8 4.0 4 1 0 4 4 4 0 Osmosensory transporter coiled coil DUF1910 PF08928.10 gi|452211038|ref|YP_007491152.1| - 0.087 12.8 4.9 0.04 13.9 1.4 2.2 1 1 0 2 2 2 0 Domain of unknown function (DUF1910) Sec34 PF04136.15 gi|452211038|ref|YP_007491152.1| - 0.19 11.6 12.0 0.56 10.1 1.8 3.2 2 1 1 3 3 3 0 Sec34-like family DUF1664 PF07889.12 gi|452211038|ref|YP_007491152.1| - 0.95 9.5 17.0 0.69 10.0 3.4 3.2 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) DUF5082 PF16888.5 gi|452211038|ref|YP_007491152.1| - 5.2 7.4 20.9 0.68 10.2 10.5 2.7 1 1 1 3 3 3 0 Domain of unknown function (DUF5082) DAP_B PF07930.12 gi|452211038|ref|YP_007491152.1| - 7.7 6.5 9.0 3.8 7.5 1.2 2.3 1 1 2 3 3 3 0 D-aminopeptidase, domain B NPV_P10 PF05531.12 gi|452211038|ref|YP_007491152.1| - 9.8 6.7 11.6 11 6.6 0.7 3.6 1 1 2 3 3 3 0 Nucleopolyhedrovirus P10 protein V4R PF02830.18 gi|452211039|ref|YP_007491153.1| - 2.3e-16 59.5 0.6 4.7e-16 58.6 0.6 1.6 1 0 0 1 1 1 1 V4R domain HTH_5 PF01022.20 gi|452211039|ref|YP_007491153.1| - 1.8e-13 50.1 0.0 3.3e-13 49.3 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 gi|452211039|ref|YP_007491153.1| - 4.9e-06 26.3 0.0 8.2e-06 25.6 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|452211039|ref|YP_007491153.1| - 2.3e-05 24.8 0.0 4.4e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_20 PF12840.7 gi|452211039|ref|YP_007491153.1| - 0.00037 20.5 0.0 0.00091 19.2 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.10 gi|452211039|ref|YP_007491153.1| - 0.00071 19.3 0.0 0.0013 18.5 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain TrmB PF01978.19 gi|452211039|ref|YP_007491153.1| - 0.015 15.2 0.0 0.032 14.1 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB RnlB_antitoxin PF15933.5 gi|452211039|ref|YP_007491153.1| - 0.019 15.3 0.0 0.033 14.5 0.0 1.5 1 0 0 1 1 1 0 Antitoxin to bacterial toxin RNase LS or RnlA DprA_WH PF17782.1 gi|452211039|ref|YP_007491153.1| - 0.094 12.9 0.0 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 DprA winged helix domain HxlR PF01638.17 gi|452211039|ref|YP_007491153.1| - 0.11 12.4 0.0 0.22 11.4 0.0 1.5 1 0 0 1 1 1 0 HxlR-like helix-turn-helix DUF2110 PF09883.9 gi|452211040|ref|YP_007491154.1| - 2.1e-88 295.6 0.0 2.5e-88 295.4 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2110) MarR PF01047.22 gi|452211041|ref|YP_007491155.1| - 0.006 16.5 0.0 0.013 15.4 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 gi|452211041|ref|YP_007491155.1| - 0.019 14.9 0.0 0.045 13.7 0.0 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain RE_MjaI PF09568.10 gi|452211041|ref|YP_007491155.1| - 0.03 14.2 1.5 0.03 14.2 1.5 1.7 2 0 0 2 2 2 0 MjaI restriction endonuclease HTH_27 PF13463.6 gi|452211041|ref|YP_007491155.1| - 0.05 14.1 0.0 0.13 12.8 0.0 1.7 1 0 0 1 1 1 0 Winged helix DNA-binding domain RXLR PF16810.5 gi|452211041|ref|YP_007491155.1| - 0.06 13.8 1.7 0.095 13.1 1.7 1.3 1 0 0 1 1 1 0 RXLR phytopathogen effector protein, Avirulence activity DUF2250 PF10007.9 gi|452211041|ref|YP_007491155.1| - 0.069 13.3 0.0 0.2 11.8 0.0 1.8 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) Sigma70_ner PF04546.13 gi|452211041|ref|YP_007491155.1| - 0.13 12.1 8.4 0.26 11.1 8.2 1.6 1 1 0 1 1 1 0 Sigma-70, non-essential region Atg14 PF10186.9 gi|452211041|ref|YP_007491155.1| - 0.47 9.5 3.6 0.76 8.8 3.6 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 TRM PF02005.16 gi|452211042|ref|YP_007491156.1| - 2.5e-104 349.4 0.0 2.9e-104 349.3 0.0 1.0 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Cons_hypoth95 PF03602.15 gi|452211042|ref|YP_007491156.1| - 0.012 15.3 0.0 0.019 14.6 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical protein 95 Nop10p PF04135.12 gi|452211042|ref|YP_007491156.1| - 0.2 11.7 0.2 0.52 10.4 0.0 1.8 2 0 0 2 2 2 0 Nucleolar RNA-binding protein, Nop10p family zf-ribbon_3 PF13248.6 gi|452211042|ref|YP_007491156.1| - 0.39 10.2 6.2 6 6.4 0.2 3.0 3 0 0 3 3 3 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|452211042|ref|YP_007491156.1| - 5.3 7.2 5.5 76 3.6 5.9 2.4 1 1 1 2 2 2 0 Zinc ribbon domain Cupredoxin_1 PF13473.6 gi|452211043|ref|YP_007491157.1| - 0.0022 18.0 0.0 0.0042 17.2 0.0 1.5 1 0 0 1 1 1 1 Cupredoxin-like domain Mucin PF01456.17 gi|452211043|ref|YP_007491157.1| - 0.038 14.0 0.0 0.053 13.5 0.0 1.2 1 0 0 1 1 1 0 Mucin-like glycoprotein Copper-bind PF00127.20 gi|452211043|ref|YP_007491157.1| - 0.082 13.4 0.1 0.4 11.2 0.1 2.2 1 1 0 1 1 1 0 Copper binding proteins, plastocyanin/azurin family Merozoite_SPAM PF07133.11 gi|452211044|ref|YP_007491158.1| - 0.0034 17.4 9.7 0.0045 17.0 9.7 1.1 1 0 0 1 1 1 1 Merozoite surface protein (SPAM) Trep_dent_lipo PF09710.10 gi|452211044|ref|YP_007491158.1| - 0.068 12.1 0.1 0.072 12.0 0.1 1.2 1 0 0 1 1 1 0 Treponema clustered lipoprotein (Trep_dent_lipo) Tim54 PF11711.8 gi|452211044|ref|YP_007491158.1| - 0.42 9.4 5.3 0.47 9.2 5.3 1.1 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 DUF4592 PF15262.6 gi|452211044|ref|YP_007491158.1| - 0.55 10.9 4.4 0.81 10.4 4.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4592) DASH_Dad4 PF08650.10 gi|452211045|ref|YP_007491159.1| - 0.055 13.4 1.0 0.057 13.4 1.0 1.0 1 0 0 1 1 1 0 DASH complex subunit Dad4 DUF4010 PF13194.6 gi|452211046|ref|YP_007491160.1| - 1.7e-48 165.1 18.9 1.7e-48 165.1 18.9 2.2 2 1 0 2 2 2 1 Domain of unknown function (DUF4010) MgtC PF02308.16 gi|452211046|ref|YP_007491160.1| - 6.7e-17 62.0 8.7 6.7e-17 62.0 8.7 3.6 2 1 0 2 2 2 1 MgtC family Metallophos_2 PF12850.7 gi|452211047|ref|YP_007491161.1| - 1e-21 77.9 0.0 1.4e-21 77.4 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|452211047|ref|YP_007491161.1| - 2.2e-19 70.8 0.1 3.9e-19 70.0 0.1 1.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_3 PF14582.6 gi|452211047|ref|YP_007491161.1| - 1.6e-13 50.6 0.6 2.1e-09 37.1 0.1 2.6 1 1 1 2 2 2 2 Metallophosphoesterase, calcineurin superfamily Methyltrn_RNA_2 PF04013.12 gi|452211048|ref|YP_007491162.1| - 5.5e-61 205.7 0.0 6.2e-61 205.6 0.0 1.0 1 0 0 1 1 1 1 Putative SAM-dependent RNA methyltransferase THUMP PF02926.17 gi|452211049|ref|YP_007491163.1| - 2.7e-11 43.8 0.8 7e-11 42.4 0.0 2.0 2 1 0 2 2 2 1 THUMP domain Ribosomal_L21e PF01157.18 gi|452211050|ref|YP_007491164.1| - 6.2e-34 115.9 0.6 6.8e-34 115.7 0.6 1.0 1 0 0 1 1 1 1 Ribosomal protein L21e RNA_pol_Rpb4 PF03874.16 gi|452211051|ref|YP_007491165.1| - 4.3e-10 40.0 1.5 5.9e-10 39.5 1.5 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb4 FumaraseC_C PF10415.9 gi|452211051|ref|YP_007491165.1| - 0.28 11.7 2.6 1 9.8 0.0 2.7 2 1 1 3 3 3 0 Fumarase C C-terminus DUF655 PF04919.12 gi|452211053|ref|YP_007491167.1| - 2.6e-66 223.0 0.1 3.1e-66 222.8 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF655) HHH_6 PF14579.6 gi|452211053|ref|YP_007491167.1| - 0.0011 19.2 0.0 0.0045 17.2 0.0 1.8 1 1 1 2 2 2 1 Helix-hairpin-helix motif HHH_3 PF12836.7 gi|452211053|ref|YP_007491167.1| - 0.0029 17.8 0.0 0.021 15.1 0.0 2.2 2 0 0 2 2 2 1 Helix-hairpin-helix motif RrnaAD PF00398.20 gi|452211054|ref|YP_007491168.1| - 8.9e-40 136.4 0.1 9.7e-40 136.3 0.1 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase MTS PF05175.14 gi|452211055|ref|YP_007491169.1| - 2e-08 34.0 0.0 8.1e-06 25.5 0.0 2.1 2 0 0 2 2 2 2 Methyltransferase small domain Methyltransf_12 PF08242.12 gi|452211055|ref|YP_007491169.1| - 9.1e-06 26.3 0.0 0.0081 16.9 0.0 2.3 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_23 PF13489.6 gi|452211055|ref|YP_007491169.1| - 4e-05 23.5 0.0 0.00085 19.2 0.0 2.1 1 1 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|452211055|ref|YP_007491169.1| - 5.4e-05 23.0 0.0 0.0003 20.6 0.0 2.0 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_25 PF13649.6 gi|452211055|ref|YP_007491169.1| - 0.00016 22.3 0.0 0.01 16.5 0.0 2.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|452211055|ref|YP_007491169.1| - 0.00022 21.0 0.0 0.00032 20.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|452211055|ref|YP_007491169.1| - 0.00027 21.5 0.0 0.0051 17.4 0.0 2.2 1 1 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|452211055|ref|YP_007491169.1| - 0.0038 16.9 0.0 0.0063 16.1 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW CMAS PF02353.20 gi|452211055|ref|YP_007491169.1| - 0.01 15.1 0.0 1.4 8.2 0.0 2.1 2 0 0 2 2 2 0 Mycolic acid cyclopropane synthetase FtsJ PF01728.19 gi|452211055|ref|YP_007491169.1| - 0.024 14.8 0.0 0.073 13.2 0.0 1.7 2 0 0 2 2 2 0 FtsJ-like methyltransferase Met_10 PF02475.16 gi|452211055|ref|YP_007491169.1| - 0.033 13.9 0.0 0.049 13.4 0.0 1.3 1 0 0 1 1 1 0 Met-10+ like-protein DREV PF05219.12 gi|452211055|ref|YP_007491169.1| - 0.036 13.2 0.0 0.076 12.1 0.0 1.5 2 0 0 2 2 2 0 DREV methyltransferase Methyltransf_24 PF13578.6 gi|452211055|ref|YP_007491169.1| - 0.049 14.6 0.0 0.37 11.8 0.0 2.1 1 1 0 1 1 1 0 Methyltransferase domain PrmA PF06325.13 gi|452211055|ref|YP_007491169.1| - 0.05 13.0 0.0 0.34 10.2 0.0 1.9 2 0 0 2 2 2 0 Ribosomal protein L11 methyltransferase (PrmA) DUF1269 PF06897.12 gi|452211055|ref|YP_007491169.1| - 0.077 13.3 0.0 0.22 11.8 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1269) Methyltransf_16 PF10294.9 gi|452211055|ref|YP_007491169.1| - 0.079 12.7 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 Lysine methyltransferase Methyltransf_10 PF05971.12 gi|452211055|ref|YP_007491169.1| - 0.15 11.4 0.0 0.52 9.6 0.0 1.7 1 1 0 1 1 1 0 RNA methyltransferase Cons_hypoth95 PF03602.15 gi|452211055|ref|YP_007491169.1| - 0.16 11.6 0.0 0.35 10.5 0.0 1.6 1 1 0 1 1 1 0 Conserved hypothetical protein 95 Methyltransf_32 PF13679.6 gi|452211055|ref|YP_007491169.1| - 0.21 11.6 0.0 0.3 11.1 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain NUDIX PF00293.28 gi|452211057|ref|YP_007491171.1| - 2.5e-20 72.9 0.0 4.1e-20 72.2 0.0 1.3 1 0 0 1 1 1 1 NUDIX domain zf-NADH-PPase PF09297.11 gi|452211057|ref|YP_007491171.1| - 1.4e-12 47.0 2.9 2.3e-12 46.4 2.9 1.3 1 0 0 1 1 1 1 NADH pyrophosphatase zinc ribbon domain NUDIX-like PF09296.11 gi|452211057|ref|YP_007491171.1| - 9.1e-09 35.9 0.0 1.6e-08 35.1 0.0 1.4 1 0 0 1 1 1 1 NADH pyrophosphatase-like rudimentary NUDIX domain NOB1_Zn_bind PF08772.11 gi|452211057|ref|YP_007491171.1| - 0.00041 20.5 0.4 0.003 17.7 0.1 2.1 2 0 0 2 2 2 1 Nin one binding (NOB1) Zn-ribbon like DZR PF12773.7 gi|452211057|ref|YP_007491171.1| - 0.00076 19.5 0.5 0.0014 18.6 0.5 1.3 1 0 0 1 1 1 1 Double zinc ribbon OrfB_Zn_ribbon PF07282.11 gi|452211057|ref|YP_007491171.1| - 0.0019 18.1 0.7 0.0034 17.3 0.7 1.4 1 0 0 1 1 1 1 Putative transposase DNA-binding domain zf-ribbon_3 PF13248.6 gi|452211057|ref|YP_007491171.1| - 0.017 14.5 1.7 3 7.4 0.2 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|452211057|ref|YP_007491171.1| - 0.038 13.7 3.8 0.54 10.1 0.2 2.4 2 0 0 2 2 2 0 zinc-ribbon domain HypA PF01155.19 gi|452211057|ref|YP_007491171.1| - 0.039 14.0 0.4 0.064 13.3 0.4 1.2 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF35_N PF12172.8 gi|452211057|ref|YP_007491171.1| - 0.051 13.5 1.3 1.2 9.1 0.1 2.6 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-C3HC4_2 PF13923.6 gi|452211057|ref|YP_007491171.1| - 0.12 12.2 1.7 0.22 11.4 1.7 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) RNA_POL_M_15KD PF02150.16 gi|452211057|ref|YP_007491171.1| - 0.2 11.6 1.1 4.9 7.1 0.0 2.4 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit zf_UBZ PF18439.1 gi|452211057|ref|YP_007491171.1| - 0.59 9.8 2.2 11 5.7 0.2 2.3 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger Nudix_N_2 PF14803.6 gi|452211057|ref|YP_007491171.1| - 1 9.3 3.6 9.4 6.2 3.6 2.2 1 1 0 1 1 1 0 Nudix N-terminal Zn-ribbon_8 PF09723.10 gi|452211057|ref|YP_007491171.1| - 1.1 9.4 3.9 13 6.0 4.2 2.1 1 1 1 2 2 2 0 Zinc ribbon domain TetR_N PF00440.23 gi|452211058|ref|YP_007491172.1| - 1.2e-15 57.1 0.2 2.5e-15 56.0 0.2 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_Tnp_1_2 PF13022.6 gi|452211058|ref|YP_007491172.1| - 0.0056 16.8 0.1 0.0087 16.2 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix of insertion element transposase TetR_C_29 PF17938.1 gi|452211058|ref|YP_007491172.1| - 0.021 14.9 0.0 0.054 13.6 0.0 1.7 1 1 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain TetR_C_25 PF17933.1 gi|452211058|ref|YP_007491172.1| - 0.026 14.9 0.0 0.044 14.1 0.0 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain HTH_23 PF13384.6 gi|452211058|ref|YP_007491172.1| - 0.11 12.3 0.0 0.28 11.0 0.0 1.7 2 0 0 2 2 2 0 Homeodomain-like domain Fer4 PF00037.27 gi|452211059|ref|YP_007491173.1| - 2.3e-10 39.8 18.4 2.1e-05 24.1 4.9 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|452211059|ref|YP_007491173.1| - 1.2e-07 31.7 15.6 2.9e-07 30.5 15.6 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|452211059|ref|YP_007491173.1| - 7.7e-07 29.6 14.6 0.0035 17.9 1.4 2.6 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|452211059|ref|YP_007491173.1| - 2.1e-06 27.8 11.3 0.0056 16.8 1.4 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|452211059|ref|YP_007491173.1| - 9.6e-06 26.0 12.5 0.002 18.5 2.9 2.6 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452211059|ref|YP_007491173.1| - 1.2e-05 26.2 16.2 0.00066 20.6 4.4 2.6 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|452211059|ref|YP_007491173.1| - 0.00017 21.7 17.7 0.00017 21.7 17.7 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain FMN_red PF03358.15 gi|452211059|ref|YP_007491173.1| - 0.00094 19.0 0.1 0.0028 17.4 0.0 1.8 2 0 0 2 2 2 1 NADPH-dependent FMN reductase Fer4_18 PF13746.6 gi|452211059|ref|YP_007491173.1| - 0.0028 17.8 10.2 0.0065 16.7 10.2 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452211059|ref|YP_007491173.1| - 0.0047 16.9 3.3 0.0047 16.9 3.3 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Flavodoxin_2 PF02525.17 gi|452211059|ref|YP_007491173.1| - 0.0061 16.3 0.0 0.0096 15.6 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin-like fold Fer4_6 PF12837.7 gi|452211059|ref|YP_007491173.1| - 0.007 16.4 19.4 0.026 14.6 4.6 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Flavodoxin_5 PF12724.7 gi|452211059|ref|YP_007491173.1| - 0.035 14.3 0.0 0.06 13.6 0.0 1.4 1 0 0 1 1 1 0 Flavodoxin domain Flavodoxin_3 PF12641.7 gi|452211059|ref|YP_007491173.1| - 0.058 13.1 0.1 0.85 9.3 0.0 2.2 2 0 0 2 2 2 0 Flavodoxin domain Fer4_3 PF12798.7 gi|452211059|ref|YP_007491173.1| - 0.081 13.9 7.3 0.081 13.9 7.3 3.4 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|452211059|ref|YP_007491173.1| - 0.4 11.3 22.2 0.081 13.5 2.9 2.7 2 1 2 4 4 4 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|452211059|ref|YP_007491173.1| - 2.2 8.9 19.5 1.3 9.6 4.0 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Glyoxalase PF00903.25 gi|452211060|ref|YP_007491174.1| - 8.1e-13 48.7 0.0 2.8e-12 46.9 0.0 1.7 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 gi|452211060|ref|YP_007491174.1| - 4.1e-09 36.7 0.0 1.6e-08 34.8 0.0 1.8 1 1 1 2 2 2 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_2 PF12681.7 gi|452211060|ref|YP_007491174.1| - 6.6e-06 26.0 0.0 8.9e-06 25.6 0.0 1.2 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_6 PF18029.1 gi|452211060|ref|YP_007491174.1| - 8.7e-05 23.3 0.0 0.0001 23.1 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_3 PF13468.6 gi|452211060|ref|YP_007491174.1| - 0.12 12.5 0.0 1.6 8.8 0.0 2.0 1 1 0 1 1 1 0 Glyoxalase-like domain Lys_export PF03956.13 gi|452211060|ref|YP_007491174.1| - 0.16 11.5 0.0 0.42 10.1 0.0 1.7 1 1 1 2 2 2 0 Lysine exporter LysO Pentapeptide_4 PF13599.6 gi|452211062|ref|YP_007491176.1| - 0.00053 20.1 0.1 0.0011 19.1 0.1 1.4 1 0 0 1 1 1 1 Pentapeptide repeats (9 copies) ParE_toxin PF05016.15 gi|452211062|ref|YP_007491176.1| - 0.019 15.6 0.1 0.029 15.0 0.1 1.3 1 0 0 1 1 1 0 ParE toxin of type II toxin-antitoxin system, parDE YafQ_toxin PF15738.5 gi|452211062|ref|YP_007491176.1| - 0.021 15.1 1.5 0.031 14.6 1.5 1.2 1 0 0 1 1 1 0 Bacterial toxin of type II toxin-antitoxin system, YafQ Abhydrolase_1 PF00561.20 gi|452211063|ref|YP_007491177.1| - 1.3e-21 77.4 1.8 5.2e-15 55.8 0.5 2.1 1 1 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|452211063|ref|YP_007491177.1| - 1.9e-11 43.7 0.2 7.9e-11 41.7 0.2 1.9 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 gi|452211063|ref|YP_007491177.1| - 3.5e-11 44.1 0.0 4.9e-11 43.7 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_4 PF08386.10 gi|452211063|ref|YP_007491177.1| - 2.4e-06 27.6 0.0 4.1e-06 26.8 0.0 1.4 1 0 0 1 1 1 1 TAP-like protein Ndr PF03096.14 gi|452211063|ref|YP_007491177.1| - 4.7e-06 25.5 0.0 1.6e-05 23.8 0.0 1.8 2 0 0 2 2 2 1 Ndr family Peptidase_S9 PF00326.21 gi|452211063|ref|YP_007491177.1| - 0.00035 20.1 0.2 0.21 11.0 0.1 2.2 2 0 0 2 2 2 2 Prolyl oligopeptidase family Abhydrolase_5 PF12695.7 gi|452211063|ref|YP_007491177.1| - 0.0006 19.6 0.1 0.53 10.0 0.0 2.2 2 0 0 2 2 2 2 Alpha/beta hydrolase family BAAT_C PF08840.11 gi|452211063|ref|YP_007491177.1| - 0.0012 18.8 0.4 0.011 15.6 0.4 2.0 1 1 0 1 1 1 1 BAAT / Acyl-CoA thioester hydrolase C terminal Esterase_phd PF10503.9 gi|452211063|ref|YP_007491177.1| - 0.0023 17.5 0.1 0.024 14.1 0.0 2.1 2 0 0 2 2 2 1 Esterase PHB depolymerase Abhydrolase_3 PF07859.13 gi|452211063|ref|YP_007491177.1| - 0.0038 17.1 0.4 0.093 12.6 0.4 2.3 1 1 0 1 1 1 1 alpha/beta hydrolase fold DLH PF01738.18 gi|452211063|ref|YP_007491177.1| - 0.0073 15.9 0.0 0.12 11.9 0.0 2.1 2 0 0 2 2 2 1 Dienelactone hydrolase family DUF915 PF06028.11 gi|452211063|ref|YP_007491177.1| - 0.031 13.6 0.0 0.12 11.6 0.0 1.9 2 0 0 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF915) Ser_hydrolase PF06821.13 gi|452211063|ref|YP_007491177.1| - 0.038 13.8 0.0 0.098 12.5 0.0 1.6 2 0 0 2 2 2 0 Serine hydrolase DUF1057 PF06342.12 gi|452211063|ref|YP_007491177.1| - 0.085 11.9 0.0 0.13 11.3 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1057) PGAP1 PF07819.13 gi|452211063|ref|YP_007491177.1| - 0.11 12.2 0.3 1.1 8.9 0.1 2.2 2 0 0 2 2 2 0 PGAP1-like protein Abhydrolase_2 PF02230.16 gi|452211063|ref|YP_007491177.1| - 0.13 12.0 0.6 7.9 6.2 0.0 2.8 3 0 0 3 3 3 0 Phospholipase/Carboxylesterase DEAD PF00270.29 gi|452211065|ref|YP_007491179.1| - 3.6e-51 173.4 0.5 6.3e-51 172.6 0.2 1.6 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|452211065|ref|YP_007491179.1| - 2.5e-34 118.0 1.2 4.7e-32 110.6 0.2 3.0 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|452211065|ref|YP_007491179.1| - 1.1e-11 45.0 0.1 5.8e-11 42.7 0.0 2.0 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit UTP25 PF06862.12 gi|452211065|ref|YP_007491179.1| - 6.6e-05 21.9 0.1 0.49 9.1 0.0 3.0 2 1 1 3 3 3 2 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 ERCC3_RAD25_C PF16203.5 gi|452211065|ref|YP_007491179.1| - 0.00011 21.5 0.2 0.00018 20.8 0.2 1.2 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase CMS1 PF14617.6 gi|452211065|ref|YP_007491179.1| - 0.00025 20.5 0.2 0.00063 19.2 0.1 1.8 1 1 1 2 2 2 1 U3-containing 90S pre-ribosomal complex subunit AAA_19 PF13245.6 gi|452211065|ref|YP_007491179.1| - 0.0014 19.0 0.0 0.032 14.6 0.0 2.2 2 0 0 2 2 2 1 AAA domain Flavi_DEAD PF07652.14 gi|452211065|ref|YP_007491179.1| - 0.014 15.4 0.1 0.1 12.6 0.0 2.5 1 1 1 2 2 2 0 Flavivirus DEAD domain AAA_30 PF13604.6 gi|452211065|ref|YP_007491179.1| - 0.028 14.2 0.0 0.13 12.0 0.0 2.0 2 0 0 2 2 2 0 AAA domain V-ATPase_H_C PF11698.8 gi|452211065|ref|YP_007491179.1| - 0.029 14.5 0.8 0.19 11.9 0.0 2.5 2 1 1 3 3 3 0 V-ATPase subunit H AAA_22 PF13401.6 gi|452211065|ref|YP_007491179.1| - 0.031 14.5 0.1 0.1 12.9 0.1 1.9 1 1 0 1 1 1 0 AAA domain Catalase PF00199.19 gi|452211066|ref|YP_007491180.1| - 2.9e-185 615.9 2.2 3.5e-185 615.6 2.2 1.1 1 0 0 1 1 1 1 Catalase Catalase-rel PF06628.12 gi|452211066|ref|YP_007491180.1| - 1.9e-21 76.1 0.0 4.4e-21 74.9 0.0 1.7 1 0 0 1 1 1 1 Catalase-related immune-responsive PMBR PF09373.10 gi|452211067|ref|YP_007491181.1| - 0.019 15.1 0.5 0.12 12.6 0.2 2.2 2 0 0 2 2 2 0 Pseudomurein-binding repeat RsgA_GTPase PF03193.16 gi|452211067|ref|YP_007491181.1| - 0.16 11.9 0.0 0.35 10.7 0.0 1.6 2 0 0 2 2 2 0 RsgA GTPase DUF362 PF04015.12 gi|452211068|ref|YP_007491182.1| - 5.1e-46 157.5 0.2 6.2e-46 157.2 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF362) Fer4 PF00037.27 gi|452211068|ref|YP_007491182.1| - 8.8e-17 60.2 17.7 1.8e-08 33.9 5.7 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|452211068|ref|YP_007491182.1| - 6e-13 49.2 36.1 2.2e-08 34.6 12.6 2.4 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|452211068|ref|YP_007491182.1| - 8.8e-13 47.7 15.6 1.9e-06 27.7 4.1 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|452211068|ref|YP_007491182.1| - 6.2e-11 42.3 26.6 9.3e-09 35.3 13.0 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452211068|ref|YP_007491182.1| - 3.7e-10 39.8 21.9 2.5e-08 33.9 11.3 2.0 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|452211068|ref|YP_007491182.1| - 6.6e-09 35.8 12.5 5.2e-05 23.3 2.3 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452211068|ref|YP_007491182.1| - 1e-08 34.8 14.6 4.1e-05 23.4 3.5 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|452211068|ref|YP_007491182.1| - 1.1e-08 35.9 11.5 0.00013 22.8 2.9 2.5 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|452211068|ref|YP_007491182.1| - 1.4e-06 28.3 12.4 0.0041 17.5 3.7 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|452211068|ref|YP_007491182.1| - 7.4e-06 26.6 24.9 0.0022 18.8 5.9 3.0 3 0 0 3 3 2 2 4Fe-4S binding domain Lar_N PF09861.9 gi|452211068|ref|YP_007491182.1| - 0.00015 21.0 0.3 0.00023 20.4 0.3 1.3 1 0 0 1 1 1 1 Lactate racemase N-terminal domain Fer4_13 PF13370.6 gi|452211068|ref|YP_007491182.1| - 0.00024 21.6 13.4 0.046 14.3 3.1 2.5 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 gi|452211068|ref|YP_007491182.1| - 0.00079 20.2 8.2 0.077 13.8 0.8 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|452211068|ref|YP_007491182.1| - 0.0022 18.5 15.0 0.11 13.1 2.5 2.4 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|452211068|ref|YP_007491182.1| - 0.0024 18.3 16.0 0.042 14.3 2.4 2.5 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|452211068|ref|YP_007491182.1| - 0.0035 17.5 13.4 0.19 12.0 12.2 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain MinC_C PF03775.16 gi|452211068|ref|YP_007491182.1| - 0.13 12.3 0.2 0.23 11.5 0.2 1.4 1 0 0 1 1 1 0 Septum formation inhibitor MinC, C-terminal domain Fer4_15 PF13459.6 gi|452211068|ref|YP_007491182.1| - 0.18 12.6 12.3 1.1 10.1 2.3 2.6 1 1 1 2 2 2 0 4Fe-4S single cluster domain DUF498 PF04430.14 gi|452211069|ref|YP_007491183.1| - 1.7e-12 47.4 0.0 1.9e-12 47.2 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF498/DUF598) DUF3107 PF11305.8 gi|452211069|ref|YP_007491183.1| - 0.039 14.2 0.1 0.072 13.3 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3107) DUF3343 PF11823.8 gi|452211069|ref|YP_007491183.1| - 0.069 12.6 0.2 0.17 11.3 0.1 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3343) Radical_SAM PF04055.21 gi|452211071|ref|YP_007491185.1| - 2.8e-20 73.3 0.0 6.5e-20 72.2 0.0 1.6 2 0 0 2 2 2 1 Radical SAM superfamily DZR PF12773.7 gi|452211071|ref|YP_007491185.1| - 0.00098 19.1 0.2 0.00098 19.1 0.2 3.1 3 1 0 3 3 2 1 Double zinc ribbon YhfH PF14149.6 gi|452211071|ref|YP_007491185.1| - 0.0039 17.1 2.0 0.11 12.5 0.3 2.9 2 0 0 2 2 2 1 YhfH-like protein GFA PF04828.14 gi|452211071|ref|YP_007491185.1| - 0.025 14.9 1.6 6.3 7.2 0.0 3.7 3 1 1 4 4 4 0 Glutathione-dependent formaldehyde-activating enzyme TF_Zn_Ribbon PF08271.12 gi|452211071|ref|YP_007491185.1| - 0.026 14.0 1.1 2.8 7.5 0.0 2.9 2 0 0 2 2 2 0 TFIIB zinc-binding DNA_ligase_ZBD PF03119.16 gi|452211071|ref|YP_007491185.1| - 0.033 14.2 2.4 1.4 9.0 0.1 3.0 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain Fer4_12 PF13353.6 gi|452211071|ref|YP_007491185.1| - 0.074 13.3 0.0 0.18 12.1 0.0 1.7 1 0 0 1 1 1 0 4Fe-4S single cluster domain Zn-ribbon_8 PF09723.10 gi|452211071|ref|YP_007491185.1| - 0.094 12.9 13.8 0.69 10.1 0.3 4.2 3 1 1 4 4 4 0 Zinc ribbon domain zf-IS66 PF13005.7 gi|452211071|ref|YP_007491185.1| - 0.1 13.0 6.4 12 6.4 0.2 3.9 4 0 0 4 4 3 0 zinc-finger binding domain of transposase IS66 zf-C4_Topoisom PF01396.19 gi|452211071|ref|YP_007491185.1| - 0.31 10.9 9.7 1.1 9.1 0.0 3.5 3 0 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger zf-ribbon_3 PF13248.6 gi|452211071|ref|YP_007491185.1| - 0.31 10.5 0.1 0.31 10.5 0.1 3.9 5 0 0 5 5 5 0 zinc-ribbon domain zf_UBZ PF18439.1 gi|452211071|ref|YP_007491185.1| - 0.33 10.6 0.1 0.33 10.6 0.1 2.9 3 0 0 3 3 2 0 Ubiquitin-Binding Zinc Finger zf_C2H2_10 PF18414.1 gi|452211071|ref|YP_007491185.1| - 0.34 10.5 4.3 0.27 10.8 0.8 2.5 2 0 0 2 2 2 0 C2H2 type zinc-finger RNA_POL_M_15KD PF02150.16 gi|452211071|ref|YP_007491185.1| - 0.63 10.0 0.0 0.63 10.0 0.0 3.7 4 0 0 4 4 4 0 RNA polymerases M/15 Kd subunit zinc_ribbon_2 PF13240.6 gi|452211071|ref|YP_007491185.1| - 0.83 9.5 16.4 0.99 9.2 0.2 4.5 5 0 0 5 5 5 0 zinc-ribbon domain zf-ACC PF17848.1 gi|452211071|ref|YP_007491185.1| - 1.9 8.6 7.8 10 6.3 0.1 3.2 3 0 0 3 3 3 0 Acetyl-coA carboxylase zinc finger domain ADK_lid PF05191.14 gi|452211071|ref|YP_007491185.1| - 3.6 7.6 7.6 6 6.9 0.0 3.3 3 1 0 3 3 3 0 Adenylate kinase, active site lid zf-4CXXC_R1 PF10497.9 gi|452211071|ref|YP_007491185.1| - 9.9 6.5 8.8 3.4 7.9 0.0 3.0 2 1 0 2 2 2 0 Zinc-finger domain of monoamine-oxidase A repressor R1 DUF4177 PF13783.6 gi|452211072|ref|YP_007491186.1| - 8.9e-05 22.7 0.8 0.00014 22.1 0.8 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4177) FGGY_N PF00370.21 gi|452211073|ref|YP_007491187.1| - 0.083 12.4 0.0 0.086 12.4 0.0 1.0 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, N-terminal domain SBP_bac_5 PF00496.22 gi|452211074|ref|YP_007491188.1| - 2.8e-90 303.0 0.0 3.5e-90 302.7 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle BPD_transp_1 PF00528.22 gi|452211075|ref|YP_007491189.1| - 9.4e-47 159.1 12.1 9.4e-47 159.1 12.1 1.6 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF3693 PF12472.8 gi|452211075|ref|YP_007491189.1| - 0.028 14.1 0.0 0.028 14.1 0.0 2.6 3 0 0 3 3 3 0 Phage related protein OppC_N PF12911.7 gi|452211075|ref|YP_007491189.1| - 0.43 10.6 0.0 0.43 10.6 0.0 3.1 4 0 0 4 4 4 0 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.22 gi|452211076|ref|YP_007491190.1| - 6.1e-29 101.1 9.2 6.1e-29 101.1 9.2 1.7 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|452211076|ref|YP_007491190.1| - 2.5e-08 33.8 0.0 2.5e-08 33.8 0.0 3.0 3 0 0 3 3 3 1 N-terminal TM domain of oligopeptide transport permease C ABC_tran PF00005.27 gi|452211077|ref|YP_007491191.1| - 2.3e-56 190.1 0.0 2.8e-30 105.6 0.0 2.2 2 0 0 2 2 2 2 ABC transporter oligo_HPY PF08352.12 gi|452211077|ref|YP_007491191.1| - 5.9e-12 45.9 0.5 1.1e-11 45.0 0.5 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|452211077|ref|YP_007491191.1| - 1e-11 45.2 1.3 0.0056 16.5 0.1 4.1 3 1 1 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|452211077|ref|YP_007491191.1| - 5.8e-08 32.4 0.0 0.001 18.6 0.0 2.7 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|452211077|ref|YP_007491191.1| - 2.2e-06 28.0 6.7 0.029 14.6 0.4 3.8 2 2 0 2 2 2 2 AAA domain AAA_29 PF13555.6 gi|452211077|ref|YP_007491191.1| - 2.2e-06 27.3 0.1 0.038 13.7 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|452211077|ref|YP_007491191.1| - 2.5e-06 28.0 0.3 0.02 15.3 0.0 2.5 2 0 0 2 2 2 2 AAA ATPase domain Rad17 PF03215.15 gi|452211077|ref|YP_007491191.1| - 5e-05 23.3 0.0 0.29 11.0 0.0 2.4 2 0 0 2 2 2 2 Rad17 P-loop domain NB-ARC PF00931.22 gi|452211077|ref|YP_007491191.1| - 0.00015 21.0 0.6 0.2 10.8 0.0 2.6 3 0 0 3 3 3 2 NB-ARC domain AAA_23 PF13476.6 gi|452211077|ref|YP_007491191.1| - 0.00018 22.1 0.2 0.076 13.5 0.1 2.3 2 0 0 2 2 2 1 AAA domain AAA_5 PF07728.14 gi|452211077|ref|YP_007491191.1| - 0.00034 20.6 1.7 0.81 9.7 0.2 2.5 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|452211077|ref|YP_007491191.1| - 0.00054 20.4 0.4 0.56 10.6 0.1 2.6 3 0 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.22 gi|452211077|ref|YP_007491191.1| - 0.00065 20.1 0.5 0.6 10.5 0.1 2.4 2 0 0 2 2 2 1 RNA helicase RsgA_GTPase PF03193.16 gi|452211077|ref|YP_007491191.1| - 0.00067 19.6 1.0 0.077 12.9 0.0 2.3 2 0 0 2 2 2 1 RsgA GTPase G-alpha PF00503.20 gi|452211077|ref|YP_007491191.1| - 0.0013 17.9 0.0 0.22 10.6 0.0 2.1 2 0 0 2 2 2 1 G-protein alpha subunit PRK PF00485.18 gi|452211077|ref|YP_007491191.1| - 0.0035 17.1 0.1 2 8.1 0.0 2.3 2 0 0 2 2 2 1 Phosphoribulokinase / Uridine kinase family Mg_chelatase PF01078.21 gi|452211077|ref|YP_007491191.1| - 0.0051 16.2 0.1 2 7.7 0.0 2.8 3 0 0 3 3 2 1 Magnesium chelatase, subunit ChlI TsaE PF02367.17 gi|452211077|ref|YP_007491191.1| - 0.0067 16.4 3.9 0.16 12.0 0.4 2.7 3 0 0 3 3 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_15 PF13175.6 gi|452211077|ref|YP_007491191.1| - 0.011 15.4 0.0 0.29 10.8 0.0 2.1 2 0 0 2 2 2 0 AAA ATPase domain AAA_18 PF13238.6 gi|452211077|ref|YP_007491191.1| - 0.013 16.1 4.2 1.3 9.6 0.0 3.4 4 1 0 4 4 2 0 AAA domain ATP-synt_ab PF00006.25 gi|452211077|ref|YP_007491191.1| - 0.018 14.7 0.0 3.2 7.3 0.0 2.2 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_33 PF13671.6 gi|452211077|ref|YP_007491191.1| - 0.018 15.2 0.3 2.3 8.4 0.0 2.4 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 gi|452211077|ref|YP_007491191.1| - 0.019 15.0 0.8 1.8 8.7 0.0 2.5 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_7 PF12775.7 gi|452211077|ref|YP_007491191.1| - 0.021 14.4 0.6 5.8 6.4 0.1 2.2 2 0 0 2 2 2 0 P-loop containing dynein motor region MobB PF03205.14 gi|452211077|ref|YP_007491191.1| - 0.03 14.2 1.3 7.8 6.4 0.4 2.4 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_25 PF13481.6 gi|452211077|ref|YP_007491191.1| - 0.03 13.9 0.6 14 5.1 0.1 3.1 3 0 0 3 3 3 0 AAA domain NACHT PF05729.12 gi|452211077|ref|YP_007491191.1| - 0.041 13.8 4.7 1.5 8.7 0.4 2.7 3 0 0 3 3 2 0 NACHT domain NTPase_1 PF03266.15 gi|452211077|ref|YP_007491191.1| - 0.058 13.3 2.6 3.7 7.4 0.6 2.5 2 0 0 2 2 2 0 NTPase PduV-EutP PF10662.9 gi|452211077|ref|YP_007491191.1| - 0.062 13.0 2.2 2.1 8.1 0.1 2.5 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation IstB_IS21 PF01695.17 gi|452211077|ref|YP_007491191.1| - 0.075 12.8 0.2 16 5.2 0.0 2.8 3 0 0 3 3 3 0 IstB-like ATP binding protein T2SSE PF00437.20 gi|452211077|ref|YP_007491191.1| - 0.1 11.6 0.2 4.5 6.2 0.2 2.2 2 0 0 2 2 2 0 Type II/IV secretion system protein ATPase PF06745.13 gi|452211077|ref|YP_007491191.1| - 0.13 11.5 1.6 2.8 7.2 0.2 2.3 2 0 0 2 2 2 0 KaiC Viral_helicase1 PF01443.18 gi|452211077|ref|YP_007491191.1| - 0.16 11.7 0.3 12 5.5 0.0 2.2 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase DUF87 PF01935.17 gi|452211077|ref|YP_007491191.1| - 0.19 11.8 2.4 4.9 7.2 1.1 2.2 2 0 0 2 2 2 0 Helicase HerA, central domain TniB PF05621.11 gi|452211077|ref|YP_007491191.1| - 0.22 10.9 0.6 6.3 6.2 0.0 2.9 3 0 0 3 3 3 0 Bacterial TniB protein AIG1 PF04548.16 gi|452211077|ref|YP_007491191.1| - 0.28 10.5 1.0 4.9 6.4 0.2 2.3 2 0 0 2 2 2 0 AIG1 family AAA_24 PF13479.6 gi|452211077|ref|YP_007491191.1| - 0.78 9.4 2.1 21 4.7 0.4 2.3 2 0 0 2 2 2 0 AAA domain Methyltransf_2 PF00891.18 gi|452211078|ref|YP_007491192.1| - 3.9e-12 45.9 0.0 5.9e-12 45.3 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase domain Dimerisation2 PF16864.5 gi|452211078|ref|YP_007491192.1| - 1.3e-07 31.4 0.0 2.4e-06 27.4 0.0 2.2 2 0 0 2 2 2 1 Dimerisation domain Methyltransf_12 PF08242.12 gi|452211078|ref|YP_007491192.1| - 0.0047 17.7 0.0 0.012 16.4 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|452211078|ref|YP_007491192.1| - 0.0081 16.8 0.0 0.017 15.8 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Fe_dep_repress PF01325.19 gi|452211079|ref|YP_007491193.1| - 7e-19 67.8 0.6 1.1e-18 67.1 0.6 1.4 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain Fe_dep_repr_C PF02742.15 gi|452211079|ref|YP_007491193.1| - 4e-16 58.8 1.5 7.8e-16 57.9 1.5 1.5 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain HTH_24 PF13412.6 gi|452211079|ref|YP_007491193.1| - 6.8e-05 22.3 0.0 0.00015 21.3 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_micro PF17007.5 gi|452211079|ref|YP_007491193.1| - 0.00011 21.2 1.0 0.00014 20.9 0.2 1.6 1 1 1 2 2 2 1 HTH-like LexA_DNA_bind PF01726.16 gi|452211079|ref|YP_007491193.1| - 0.00012 21.7 0.0 0.00022 20.9 0.0 1.4 1 0 0 1 1 1 1 LexA DNA binding domain MarR PF01047.22 gi|452211079|ref|YP_007491193.1| - 0.00021 21.2 0.0 0.00041 20.2 0.0 1.5 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|452211079|ref|YP_007491193.1| - 0.00064 19.6 0.0 0.0016 18.3 0.0 1.7 2 0 0 2 2 2 1 MarR family HTH_5 PF01022.20 gi|452211079|ref|YP_007491193.1| - 0.00081 19.2 0.0 0.0014 18.4 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family Rrf2 PF02082.20 gi|452211079|ref|YP_007491193.1| - 0.002 18.4 0.0 0.0034 17.7 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator HTH_45 PF14947.6 gi|452211079|ref|YP_007491193.1| - 0.0035 17.3 1.4 0.0057 16.6 0.7 1.6 1 1 1 2 2 2 1 Winged helix-turn-helix HTH_12 PF08461.10 gi|452211079|ref|YP_007491193.1| - 0.0037 17.2 0.3 0.014 15.3 0.3 2.0 1 1 0 1 1 1 1 Ribonuclease R winged-helix domain Penicillinase_R PF03965.16 gi|452211079|ref|YP_007491193.1| - 0.0044 17.4 0.0 0.015 15.6 0.0 1.9 1 1 0 1 1 1 1 Penicillinase repressor TrmB PF01978.19 gi|452211079|ref|YP_007491193.1| - 0.0056 16.5 0.1 0.012 15.5 0.1 1.7 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_40 PF14493.6 gi|452211079|ref|YP_007491193.1| - 0.0071 16.8 0.0 0.018 15.5 0.0 1.8 1 1 0 1 1 1 1 Helix-turn-helix domain Swi6_N PF18530.1 gi|452211079|ref|YP_007491193.1| - 0.0074 16.4 0.1 0.012 15.7 0.1 1.4 1 0 0 1 1 1 1 Swi6 N-terminal domain HTH_IclR PF09339.10 gi|452211079|ref|YP_007491193.1| - 0.01 15.6 0.0 0.032 14.0 0.0 1.9 2 0 0 2 2 2 0 IclR helix-turn-helix domain HTH_6 PF01418.17 gi|452211079|ref|YP_007491193.1| - 0.046 13.7 0.0 0.082 12.9 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family FeoC PF09012.10 gi|452211079|ref|YP_007491193.1| - 0.05 13.7 0.0 0.16 12.1 0.0 1.8 1 1 1 2 2 2 0 FeoC like transcriptional regulator Mrr_N PF14338.6 gi|452211079|ref|YP_007491193.1| - 0.066 13.4 0.1 0.16 12.2 0.1 1.6 1 0 0 1 1 1 0 Mrr N-terminal domain HTH_Crp_2 PF13545.6 gi|452211079|ref|YP_007491193.1| - 0.067 13.2 0.0 0.16 12.0 0.0 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain CENP-B_N PF04218.13 gi|452211079|ref|YP_007491193.1| - 0.081 12.6 0.0 0.2 11.3 0.0 1.7 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain Phage_TAC_1 PF06222.11 gi|452211079|ref|YP_007491193.1| - 0.088 12.6 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 Phage tail assembly chaperone HTH_DeoR PF08220.12 gi|452211079|ref|YP_007491193.1| - 0.13 12.0 0.0 0.23 11.2 0.0 1.4 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_27 PF13463.6 gi|452211079|ref|YP_007491193.1| - 0.14 12.7 0.1 0.49 10.9 0.0 1.9 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_46 PF15977.5 gi|452211079|ref|YP_007491193.1| - 0.16 12.0 0.0 2.5 8.2 0.0 2.5 2 0 0 2 2 2 0 Winged helix-turn-helix DNA binding DDRGK PF09756.9 gi|452211079|ref|YP_007491193.1| - 0.18 11.4 4.0 0.74 9.4 0.0 2.9 1 1 1 2 2 2 0 DDRGK domain FeoC PF09012.10 gi|452211082|ref|YP_007491196.1| - 1.7e-16 60.0 3.5 2.1e-16 59.8 3.0 1.4 1 1 0 1 1 1 1 FeoC like transcriptional regulator DUF4423 PF14394.6 gi|452211082|ref|YP_007491196.1| - 0.0075 16.0 0.0 0.0096 15.6 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) DUF2250 PF10007.9 gi|452211082|ref|YP_007491196.1| - 0.0093 16.1 0.2 0.059 13.5 0.1 2.0 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2250) FaeA PF04703.12 gi|452211082|ref|YP_007491196.1| - 0.031 14.6 0.0 0.047 14.1 0.0 1.2 1 0 0 1 1 1 0 FaeA-like protein MarR PF01047.22 gi|452211082|ref|YP_007491196.1| - 0.043 13.8 0.2 0.1 12.6 0.1 1.6 2 0 0 2 2 2 0 MarR family MarR_2 PF12802.7 gi|452211082|ref|YP_007491196.1| - 0.072 13.0 0.0 0.13 12.1 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_45 PF14947.6 gi|452211082|ref|YP_007491196.1| - 0.17 11.9 0.8 5.5 7.1 0.0 2.1 2 0 0 2 2 2 0 Winged helix-turn-helix HTH_24 PF13412.6 gi|452211082|ref|YP_007491196.1| - 0.17 11.5 0.0 0.3 10.7 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding FeoB_N PF02421.18 gi|452211083|ref|YP_007491197.1| - 8.8e-63 210.5 0.4 1.3e-62 209.9 0.4 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B Gate PF07670.14 gi|452211083|ref|YP_007491197.1| - 3.3e-43 146.5 21.7 1.3e-30 106.0 3.0 2.9 3 0 0 3 3 3 2 Nucleoside recognition MMR_HSR1 PF01926.23 gi|452211083|ref|YP_007491197.1| - 2.9e-18 66.0 0.1 5.4e-18 65.1 0.1 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_C PF07664.12 gi|452211083|ref|YP_007491197.1| - 4.7e-18 64.6 0.6 4.7e-18 64.6 0.6 2.6 2 0 0 2 2 2 1 Ferrous iron transport protein B C terminus FeoB_Cyto PF17910.1 gi|452211083|ref|YP_007491197.1| - 5.4e-17 62.1 1.1 1.1e-16 61.2 1.1 1.5 1 0 0 1 1 1 1 FeoB cytosolic helical domain SRPRB PF09439.10 gi|452211083|ref|YP_007491197.1| - 0.00034 20.1 0.0 0.00069 19.1 0.0 1.5 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit AIG1 PF04548.16 gi|452211083|ref|YP_007491197.1| - 0.038 13.3 0.0 0.061 12.6 0.0 1.3 1 0 0 1 1 1 0 AIG1 family Dynamin_N PF00350.23 gi|452211083|ref|YP_007491197.1| - 0.059 13.4 0.1 12 6.0 0.0 2.4 2 0 0 2 2 2 0 Dynamin family NTPase_1 PF03266.15 gi|452211083|ref|YP_007491197.1| - 0.075 12.9 0.2 0.13 12.1 0.2 1.4 1 0 0 1 1 1 0 NTPase MeaB PF03308.16 gi|452211083|ref|YP_007491197.1| - 0.09 11.7 0.3 5.2 6.0 0.1 2.2 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB RsgA_GTPase PF03193.16 gi|452211083|ref|YP_007491197.1| - 0.21 11.5 0.4 8.5 6.2 0.0 2.4 2 0 0 2 2 2 0 RsgA GTPase FeoA PF04023.14 gi|452211084|ref|YP_007491198.1| - 2.8e-19 69.2 0.1 3.2e-19 69.0 0.1 1.0 1 0 0 1 1 1 1 FeoA domain FeoA PF04023.14 gi|452211085|ref|YP_007491199.1| - 4.2e-16 59.0 0.1 4.6e-16 58.8 0.1 1.0 1 0 0 1 1 1 1 FeoA domain zf-ribbon_3 PF13248.6 gi|452211086|ref|YP_007491200.1| - 5.7e-05 22.4 4.3 0.1 12.0 0.1 2.8 3 0 0 3 3 3 2 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|452211086|ref|YP_007491200.1| - 0.00012 21.7 4.9 0.017 14.9 0.2 2.7 3 0 0 3 3 3 2 zinc-ribbon domain YhfH PF14149.6 gi|452211086|ref|YP_007491200.1| - 0.00015 21.6 1.8 0.006 16.5 0.2 2.5 2 0 0 2 2 2 1 YhfH-like protein DZR PF12773.7 gi|452211086|ref|YP_007491200.1| - 0.00017 21.5 0.2 0.00032 20.7 0.2 1.6 1 1 0 1 1 1 1 Double zinc ribbon Zn-ribbon_8 PF09723.10 gi|452211086|ref|YP_007491200.1| - 0.00097 19.2 0.3 0.86 9.8 0.1 2.4 2 0 0 2 2 2 2 Zinc ribbon domain zf_UBZ PF18439.1 gi|452211086|ref|YP_007491200.1| - 0.0054 16.3 0.7 1.8 8.2 0.1 2.4 2 0 0 2 2 2 1 Ubiquitin-Binding Zinc Finger zf-C4_Topoisom PF01396.19 gi|452211086|ref|YP_007491200.1| - 0.0076 16.0 1.5 3.4 7.5 0.1 2.3 2 0 0 2 2 2 2 Topoisomerase DNA binding C4 zinc finger GFA PF04828.14 gi|452211086|ref|YP_007491200.1| - 0.022 15.1 0.5 0.41 11.0 0.1 2.2 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme zf-NADH-PPase PF09297.11 gi|452211086|ref|YP_007491200.1| - 0.024 14.3 1.0 0.72 9.6 0.0 2.3 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain TF_Zn_Ribbon PF08271.12 gi|452211086|ref|YP_007491200.1| - 0.056 13.0 4.2 0.36 10.4 0.2 2.3 1 1 1 2 2 2 0 TFIIB zinc-binding zinc_ribbon_9 PF14369.6 gi|452211086|ref|YP_007491200.1| - 0.059 13.6 1.2 12 6.2 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon Auto_anti-p27 PF06677.12 gi|452211086|ref|YP_007491200.1| - 0.068 13.3 0.4 15 5.8 0.0 2.3 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Zn_Tnp_IS1595 PF12760.7 gi|452211086|ref|YP_007491200.1| - 0.075 13.0 0.9 6.3 6.9 0.0 2.3 2 0 0 2 2 2 0 Transposase zinc-ribbon domain UPF0547 PF10571.9 gi|452211086|ref|YP_007491200.1| - 0.089 12.9 4.4 0.61 10.2 0.6 2.3 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 RNA_POL_M_15KD PF02150.16 gi|452211086|ref|YP_007491200.1| - 0.1 12.5 0.2 0.1 12.5 0.2 2.1 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit DNA_ligase_ZBD PF03119.16 gi|452211086|ref|YP_007491200.1| - 0.14 12.2 1.1 10 6.3 0.4 2.4 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain Nudix_N_2 PF14803.6 gi|452211086|ref|YP_007491200.1| - 0.16 11.9 3.3 4.4 7.3 3.6 2.4 1 1 1 2 2 2 0 Nudix N-terminal DUF2256 PF10013.9 gi|452211086|ref|YP_007491200.1| - 0.19 11.9 0.7 3.2 7.9 0.1 2.2 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) NOB1_Zn_bind PF08772.11 gi|452211086|ref|YP_007491200.1| - 0.25 11.5 4.0 0.36 11.0 0.3 2.3 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like zf-IS66 PF13005.7 gi|452211086|ref|YP_007491200.1| - 0.37 11.2 3.6 7.6 7.0 0.1 2.4 1 1 1 2 2 2 0 zinc-finger binding domain of transposase IS66 zf-dskA_traR PF01258.17 gi|452211086|ref|YP_007491200.1| - 0.43 10.6 2.5 1.8 8.6 0.8 2.1 2 0 0 2 2 2 0 Prokaryotic dksA/traR C4-type zinc finger zf-ACC PF17848.1 gi|452211086|ref|YP_007491200.1| - 0.78 9.9 3.8 18 5.5 0.2 2.4 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain zf-RING_7 PF02591.15 gi|452211086|ref|YP_007491200.1| - 0.91 9.8 3.0 1.5 9.0 0.1 2.2 2 0 0 2 2 2 0 C4-type zinc ribbon domain DUF1610 PF07754.11 gi|452211086|ref|YP_007491200.1| - 4.2 7.4 11.6 2.5 8.1 2.4 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF1610) NUDIX PF00293.28 gi|452211087|ref|YP_007491201.1| - 6.7e-13 48.8 0.0 8.7e-13 48.5 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain MttA_Hcf106 PF02416.16 gi|452211088|ref|YP_007491202.1| - 2.7e-17 61.8 1.6 3.3e-17 61.5 1.6 1.4 1 1 0 1 1 1 1 mttA/Hcf106 family MttA_Hcf106 PF02416.16 gi|452211089|ref|YP_007491203.1| - 1e-12 47.1 5.4 2.3e-12 46.0 5.4 1.7 1 1 0 1 1 1 1 mttA/Hcf106 family RNA_pol_Rpc4 PF05132.14 gi|452211089|ref|YP_007491203.1| - 0.045 14.2 2.0 0.054 13.9 2.0 1.1 1 0 0 1 1 1 0 RNA polymerase III RPC4 DUF4834 PF16118.5 gi|452211089|ref|YP_007491203.1| - 0.069 14.1 0.0 0.1 13.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) IFT43 PF15305.6 gi|452211089|ref|YP_007491203.1| - 0.21 11.7 3.6 0.3 11.2 3.6 1.2 1 0 0 1 1 1 0 Intraflagellar transport protein 43 NARP1 PF12569.8 gi|452211089|ref|YP_007491203.1| - 4.8 6.0 7.6 5.6 5.7 7.6 1.0 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 DUF1682 PF07946.14 gi|452211089|ref|YP_007491203.1| - 6.6 5.8 9.0 6.4 5.9 8.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1682) TatC PF00902.18 gi|452211090|ref|YP_007491204.1| - 2.3e-47 161.5 24.2 2.8e-47 161.2 24.2 1.1 1 0 0 1 1 1 1 Sec-independent protein translocase protein (TatC) EamA PF00892.20 gi|452211093|ref|YP_007491207.1| - 1.7e-21 76.8 14.7 1.9e-21 76.7 14.7 1.0 1 0 0 1 1 1 1 EamA-like transporter family EcsB PF05975.12 gi|452211093|ref|YP_007491207.1| - 0.0038 16.1 3.0 0.0044 15.9 3.0 1.1 1 0 0 1 1 1 1 Bacterial ABC transporter protein EcsB TMEM234 PF10639.9 gi|452211093|ref|YP_007491207.1| - 0.013 15.5 3.8 0.023 14.7 3.7 1.6 1 1 0 1 1 1 0 Putative transmembrane family 234 TPT PF03151.16 gi|452211093|ref|YP_007491207.1| - 0.032 13.6 4.2 0.057 12.7 4.2 1.4 1 1 0 1 1 1 0 Triose-phosphate Transporter family DUF2070 PF09843.9 gi|452211093|ref|YP_007491207.1| - 0.043 12.1 13.0 0.052 11.8 13.0 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DAD PF02109.16 gi|452211093|ref|YP_007491207.1| - 0.13 12.6 3.3 0.12 12.7 2.2 1.7 1 1 0 1 1 1 0 DAD family Ceramidase PF05875.12 gi|452211093|ref|YP_007491207.1| - 0.32 10.4 4.6 0.31 10.4 4.0 1.3 1 1 0 1 1 1 0 Ceramidase ATPase_gene1 PF09527.10 gi|452211095|ref|YP_007491209.1| - 0.0034 17.5 5.5 0.0046 17.1 5.5 1.1 1 0 0 1 1 1 1 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter DUF3021 PF11457.8 gi|452211095|ref|YP_007491209.1| - 0.09 13.1 1.8 0.12 12.7 1.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3021) LapA_dom PF06305.11 gi|452211095|ref|YP_007491209.1| - 0.16 11.8 0.5 1.1 9.1 0.0 2.1 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain TMEMspv1-c74-12 PF11044.8 gi|452211095|ref|YP_007491209.1| - 0.67 10.0 5.1 0.11 12.5 1.5 1.6 2 0 0 2 2 2 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein EamA PF00892.20 gi|452211097|ref|YP_007491211.1| - 5.4e-37 127.0 34.8 7.2e-20 71.6 11.5 2.1 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 gi|452211097|ref|YP_007491211.1| - 4.1e-06 26.3 11.0 3.1e-05 23.5 11.0 2.2 1 1 0 1 1 1 1 Triose-phosphate Transporter family PUNUT PF16913.5 gi|452211097|ref|YP_007491211.1| - 0.00068 19.0 4.3 0.00068 19.0 4.3 2.6 1 1 2 3 3 3 1 Purine nucleobase transmembrane transport CRT-like PF08627.10 gi|452211097|ref|YP_007491211.1| - 0.0053 15.7 4.5 0.0053 15.7 4.5 1.9 1 1 0 2 2 2 1 CRT-like, chloroquine-resistance transporter-like SLC35F PF06027.12 gi|452211097|ref|YP_007491211.1| - 0.078 12.5 8.7 0.35 10.3 4.5 2.2 2 0 0 2 2 2 0 Solute carrier family 35 TMEM234 PF10639.9 gi|452211097|ref|YP_007491211.1| - 0.085 12.9 10.9 0.2 11.7 0.5 2.9 2 1 1 3 3 3 0 Putative transmembrane family 234 SKG6 PF08693.10 gi|452211097|ref|YP_007491211.1| - 0.1 12.0 0.8 1.8 8.1 0.1 2.6 2 0 0 2 2 2 0 Transmembrane alpha-helix domain TPR_2 PF07719.17 gi|452211099|ref|YP_007491213.1| - 2.2e-45 149.1 14.7 3.4e-05 23.6 0.0 9.3 9 0 0 9 9 9 8 Tetratricopeptide repeat TPR_8 PF13181.6 gi|452211099|ref|YP_007491213.1| - 8e-44 144.2 11.8 2.6e-05 24.1 0.0 9.8 10 0 0 10 10 10 9 Tetratricopeptide repeat TPR_17 PF13431.6 gi|452211099|ref|YP_007491213.1| - 3.6e-43 142.8 4.9 0.00034 20.8 0.0 9.0 9 0 0 9 9 9 8 Tetratricopeptide repeat TPR_1 PF00515.28 gi|452211099|ref|YP_007491213.1| - 9.1e-37 123.4 13.8 1.4e-05 24.7 0.0 9.0 9 0 0 9 9 9 7 Tetratricopeptide repeat TPR_11 PF13414.6 gi|452211099|ref|YP_007491213.1| - 5e-33 112.5 6.4 1.3e-05 24.8 0.0 8.5 3 1 6 9 9 9 6 TPR repeat TPR_12 PF13424.6 gi|452211099|ref|YP_007491213.1| - 1.4e-31 108.6 18.2 1.7e-07 31.4 1.0 7.4 4 2 2 6 6 6 5 Tetratricopeptide repeat TPR_16 PF13432.6 gi|452211099|ref|YP_007491213.1| - 1.1e-30 106.0 1.5 1.9e-07 31.6 0.0 5.6 4 2 1 5 5 5 5 Tetratricopeptide repeat TPR_19 PF14559.6 gi|452211099|ref|YP_007491213.1| - 5.7e-26 90.8 3.3 6.2e-05 23.4 0.1 5.8 3 1 3 6 6 6 6 Tetratricopeptide repeat TPR_14 PF13428.6 gi|452211099|ref|YP_007491213.1| - 3e-25 86.7 8.7 0.0014 19.3 0.0 9.5 4 1 7 11 11 9 5 Tetratricopeptide repeat TPR_7 PF13176.6 gi|452211099|ref|YP_007491213.1| - 2.4e-23 80.4 11.1 0.00065 19.5 0.0 9.1 9 0 0 9 9 9 5 Tetratricopeptide repeat TPR_10 PF13374.6 gi|452211099|ref|YP_007491213.1| - 6.3e-17 60.9 24.3 0.0076 16.1 0.1 9.0 9 0 0 9 9 9 7 Tetratricopeptide repeat TPR_9 PF13371.6 gi|452211099|ref|YP_007491213.1| - 1.9e-16 60.0 0.7 0.00098 19.2 0.0 6.3 2 2 6 8 8 8 4 Tetratricopeptide repeat TPR_4 PF07721.14 gi|452211099|ref|YP_007491213.1| - 4.8e-11 42.2 0.0 1.9 9.3 0.0 7.1 7 0 0 7 7 6 1 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|452211099|ref|YP_007491213.1| - 6.1e-11 42.4 10.3 0.017 15.3 0.3 4.8 2 1 5 7 7 7 5 Anaphase-promoting complex, cyclosome, subunit 3 TPR_15 PF13429.6 gi|452211099|ref|YP_007491213.1| - 9.3e-10 38.2 0.6 0.00098 18.4 0.0 3.8 1 1 2 4 4 4 3 Tetratricopeptide repeat TPR_20 PF14561.6 gi|452211099|ref|YP_007491213.1| - 1.4e-09 38.1 0.9 0.069 13.5 0.0 5.2 3 1 1 4 4 4 2 Tetratricopeptide repeat Coatomer_E PF04733.14 gi|452211099|ref|YP_007491213.1| - 2.6e-07 30.3 0.3 0.07 12.5 0.0 4.6 2 1 2 5 5 5 1 Coatomer epsilon subunit TPR_6 PF13174.6 gi|452211099|ref|YP_007491213.1| - 1.3e-06 28.7 7.9 0.83 10.4 0.0 7.4 8 0 0 8 8 7 1 Tetratricopeptide repeat BTAD PF03704.17 gi|452211099|ref|YP_007491213.1| - 3.4e-06 27.5 8.0 0.38 11.2 0.7 4.0 1 1 2 3 3 3 2 Bacterial transcriptional activator domain TPR_MalT PF17874.1 gi|452211099|ref|YP_007491213.1| - 2.4e-05 23.9 0.2 0.3 10.4 0.0 3.6 1 1 2 3 3 3 2 MalT-like TPR region NARP1 PF12569.8 gi|452211099|ref|YP_007491213.1| - 3.2e-05 23.0 7.1 1.6 7.6 0.3 5.2 1 1 4 5 5 5 1 NMDA receptor-regulated protein 1 DUF3856 PF12968.7 gi|452211099|ref|YP_007491213.1| - 0.001 19.2 3.0 40 4.3 0.0 6.4 4 2 5 9 9 8 0 Domain of Unknown Function (DUF3856) DUF4192 PF13830.6 gi|452211099|ref|YP_007491213.1| - 0.0038 17.3 0.0 0.028 14.5 0.0 2.2 2 1 1 3 3 3 1 Domain of unknown function (DUF4192) Sec16_C PF12931.7 gi|452211099|ref|YP_007491213.1| - 0.0068 16.1 0.4 0.16 11.6 0.1 3.0 2 1 1 3 3 3 1 Sec23-binding domain of Sec16 SLT_L PF14718.6 gi|452211099|ref|YP_007491213.1| - 0.085 13.0 1.7 48 4.2 0.0 4.6 5 1 1 6 6 6 0 Soluble lytic murein transglycosylase L domain Lambda_Kil PF06301.11 gi|452211099|ref|YP_007491213.1| - 0.095 12.3 0.4 52 3.6 0.0 4.3 5 0 0 5 5 5 0 Bacteriophage lambda Kil protein DUF627 PF04781.12 gi|452211099|ref|YP_007491213.1| - 0.27 11.3 2.6 38 4.4 0.1 4.3 2 1 0 3 3 3 0 Protein of unknown function (DUF627) PvlArgDC PF01862.16 gi|452211100|ref|YP_007491214.1| - 3.9e-61 205.6 0.0 4.4e-61 205.4 0.0 1.0 1 0 0 1 1 1 1 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) Hydant_A_N PF05378.13 gi|452211101|ref|YP_007491215.1| - 2.5e-31 108.8 0.6 3e-27 95.5 0.1 3.3 2 1 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region Hydantoinase_A PF01968.18 gi|452211101|ref|YP_007491215.1| - 1.9e-30 106.2 1.5 2.3e-29 102.6 0.2 2.9 2 1 0 2 2 2 1 Hydantoinase/oxoprolinase MutL PF13941.6 gi|452211101|ref|YP_007491215.1| - 2e-06 26.7 0.8 0.0028 16.3 0.1 2.2 2 0 0 2 2 2 2 MutL protein BcrAD_BadFG PF01869.20 gi|452211101|ref|YP_007491215.1| - 0.021 14.3 0.0 0.69 9.3 0.0 2.4 2 0 0 2 2 2 0 BadF/BadG/BcrA/BcrD ATPase family Hydant_A_N PF05378.13 gi|452211102|ref|YP_007491216.1| - 5.2e-32 111.0 2.6 1.6e-28 99.6 0.7 3.1 2 1 0 2 2 2 2 Hydantoinase/oxoprolinase N-terminal region Hydantoinase_A PF01968.18 gi|452211102|ref|YP_007491216.1| - 5.5e-31 107.9 1.1 6.7e-30 104.3 0.0 2.5 3 0 0 3 3 3 1 Hydantoinase/oxoprolinase MutL PF13941.6 gi|452211102|ref|YP_007491216.1| - 4.2e-06 25.6 0.6 0.01 14.5 0.1 2.3 2 0 0 2 2 2 2 MutL protein ROK PF00480.20 gi|452211102|ref|YP_007491216.1| - 0.046 13.2 0.0 0.085 12.3 0.0 1.4 1 0 0 1 1 1 0 ROK family MCR_C PF04609.12 gi|452211102|ref|YP_007491216.1| - 0.067 12.3 0.1 0.11 11.5 0.1 1.3 1 0 0 1 1 1 0 Methyl-coenzyme M reductase operon protein C EutA PF06277.11 gi|452211102|ref|YP_007491216.1| - 0.12 11.2 0.2 0.58 8.9 0.1 1.9 2 0 0 2 2 2 0 Ethanolamine utilisation protein EutA Wax2_C PF12076.8 gi|452211104|ref|YP_007491218.1| - 0.026 14.2 0.0 0.027 14.2 0.0 1.1 1 0 0 1 1 1 0 WAX2 C-terminal domain ParE_toxin PF05016.15 gi|452211105|ref|YP_007491219.1| - 3.6e-07 30.7 0.1 3.9e-07 30.6 0.1 1.1 1 0 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE DUF45 PF01863.17 gi|452211107|ref|YP_007491221.1| - 6.2e-59 199.5 0.4 7.3e-59 199.3 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF45 WLM PF08325.10 gi|452211107|ref|YP_007491221.1| - 0.0014 18.7 0.0 0.0023 18.1 0.0 1.3 1 0 0 1 1 1 1 WLM domain CC PF04942.14 gi|452211108|ref|YP_007491222.1| - 0.49 10.6 3.6 15 5.9 0.3 2.3 2 0 0 2 2 2 0 CC domain hEGF PF12661.7 gi|452211108|ref|YP_007491222.1| - 1.5 9.6 8.9 1.1e+02 3.7 8.9 2.9 1 1 0 1 1 1 0 Human growth factor-like EGF RseC_MucC PF04246.12 gi|452211109|ref|YP_007491223.1| - 0.0088 16.0 0.6 0.0094 15.9 0.6 1.0 1 0 0 1 1 1 1 Positive regulator of sigma(E), RseC/MucC LptF_LptG PF03739.14 gi|452211109|ref|YP_007491223.1| - 0.018 13.9 3.1 0.022 13.6 3.1 1.0 1 0 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG DUF3040 PF11239.8 gi|452211109|ref|YP_007491223.1| - 0.078 13.3 2.7 0.093 13.0 2.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) UPF0239 PF06783.11 gi|452211109|ref|YP_007491223.1| - 0.11 12.7 0.3 0.13 12.5 0.3 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) DUF3797 PF12677.7 gi|452211110|ref|YP_007491224.1| - 0.01 15.7 3.4 0.4 10.6 0.1 3.5 3 0 0 3 3 3 0 Domain of unknown function (DUF3797) DUF2207 PF09972.9 gi|452211110|ref|YP_007491224.1| - 0.013 14.3 0.9 0.016 14.0 0.9 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) MqsA_antitoxin PF15731.5 gi|452211110|ref|YP_007491224.1| - 0.04 14.0 6.0 2.2 8.4 0.1 3.0 2 1 0 2 2 2 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA SLATT_5 PF18160.1 gi|452211110|ref|YP_007491224.1| - 0.051 12.9 4.8 0.084 12.2 4.8 1.3 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 5 DZR PF12773.7 gi|452211110|ref|YP_007491224.1| - 0.1 12.7 9.6 41 4.3 9.6 3.0 1 1 0 1 1 1 0 Double zinc ribbon zf-BED PF02892.15 gi|452211110|ref|YP_007491224.1| - 0.63 10.1 11.2 2.8 8.0 0.1 3.9 4 0 0 4 4 4 0 BED zinc finger zf-ribbon_3 PF13248.6 gi|452211110|ref|YP_007491224.1| - 0.66 9.5 12.3 0.55 9.7 0.3 4.0 4 0 0 4 4 4 0 zinc-ribbon domain C1_1 PF00130.22 gi|452211110|ref|YP_007491224.1| - 1.3 9.0 13.1 0.052 13.4 1.6 3.0 3 1 0 3 3 3 0 Phorbol esters/diacylglycerol binding domain (C1 domain) FUR PF01475.19 gi|452211110|ref|YP_007491224.1| - 1.4 9.1 4.8 3.5 7.8 0.1 3.0 1 1 2 3 3 3 0 Ferric uptake regulator family Desulfoferrod_N PF06397.12 gi|452211110|ref|YP_007491224.1| - 2.2 8.0 14.3 1.2 8.8 0.5 3.8 4 0 0 4 4 4 0 Desulfoferrodoxin, N-terminal domain DUF3268 PF11672.8 gi|452211110|ref|YP_007491224.1| - 5 7.5 8.0 1.3 9.4 0.2 2.9 2 1 2 4 4 4 0 zinc-finger-containing domain A2L_zn_ribbon PF08792.10 gi|452211110|ref|YP_007491224.1| - 5.9 6.7 18.2 0.67 9.7 0.4 4.8 4 1 0 4 4 4 0 A2L zinc ribbon domain zinc-ribbon_6 PF10005.9 gi|452211110|ref|YP_007491224.1| - 6.3 7.6 7.9 11 6.8 4.7 2.7 2 1 0 2 2 2 0 zinc-ribbon domain QVR PF17064.5 gi|452211111|ref|YP_007491225.1| - 0.042 14.1 0.2 0.046 14.0 0.2 1.1 1 0 0 1 1 1 0 Sleepless protein DZR PF12773.7 gi|452211112|ref|YP_007491226.1| - 0.021 14.8 6.4 0.81 9.8 5.2 2.7 1 1 1 2 2 2 0 Double zinc ribbon HypA PF01155.19 gi|452211112|ref|YP_007491226.1| - 0.026 14.5 6.9 1.2 9.1 0.3 2.3 1 1 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA YhfH PF14149.6 gi|452211112|ref|YP_007491226.1| - 0.039 13.9 5.1 6.1 6.9 0.0 3.5 3 0 0 3 3 3 0 YhfH-like protein Zn-ribbon_8 PF09723.10 gi|452211112|ref|YP_007491226.1| - 0.078 13.1 11.1 1.8 8.7 0.1 3.6 3 1 0 3 3 3 0 Zinc ribbon domain zf-C2H2_3rep PF18868.1 gi|452211112|ref|YP_007491226.1| - 0.14 12.8 3.5 0.085 13.5 0.8 1.8 1 1 1 2 2 2 0 Zinc finger C2H2-type, 3 repeats FYVE PF01363.21 gi|452211112|ref|YP_007491226.1| - 0.22 11.7 8.9 0.39 10.9 1.2 3.0 1 1 1 2 2 2 0 FYVE zinc finger zf-C2H2_4 PF13894.6 gi|452211112|ref|YP_007491226.1| - 0.3 12.0 11.3 30 5.8 0.2 4.6 4 0 0 4 4 4 0 C2H2-type zinc finger zf-AN1 PF01428.16 gi|452211112|ref|YP_007491226.1| - 0.56 10.4 15.1 11 6.3 0.1 4.2 4 0 0 4 4 4 0 AN1-like Zinc finger A2L_zn_ribbon PF08792.10 gi|452211112|ref|YP_007491226.1| - 1.8 8.4 11.9 8.8 6.2 0.9 4.2 4 0 0 4 4 4 0 A2L zinc ribbon domain zinc_ribbon_15 PF17032.5 gi|452211112|ref|YP_007491226.1| - 2.5 8.9 13.4 0.77 10.5 8.9 2.4 2 1 0 2 2 2 0 zinc-ribbon family PHD_4 PF16866.5 gi|452211112|ref|YP_007491226.1| - 2.8 8.1 5.3 1.5 8.9 1.6 2.3 1 1 1 2 2 2 0 PHD-finger Rubredoxin_2 PF18073.1 gi|452211112|ref|YP_007491226.1| - 4 7.3 13.7 3.4 7.5 0.4 3.6 4 0 0 4 4 4 0 Rubredoxin metal binding domain zf-C2HC_2 PF13913.6 gi|452211112|ref|YP_007491226.1| - 5.1 7.1 12.7 0.22 11.5 1.0 3.4 3 0 0 3 3 3 0 zinc-finger of a C2HC-type TF_Zn_Ribbon PF08271.12 gi|452211112|ref|YP_007491226.1| - 7.2 6.2 11.9 7.8 6.1 0.1 4.2 3 1 1 4 4 4 0 TFIIB zinc-binding VAPB_antitox PF02697.14 gi|452211113|ref|YP_007491227.1| - 0.0099 16.6 1.1 0.015 16.1 1.1 1.4 1 1 0 1 1 1 1 Putative antitoxin MciZ PF13072.6 gi|452211113|ref|YP_007491227.1| - 0.054 13.3 0.2 0.054 13.3 0.2 1.7 2 0 0 2 2 2 0 Mother cell inhibitor of FtsZ DUF4158 PF13700.6 gi|452211113|ref|YP_007491227.1| - 0.12 12.2 0.1 0.13 12.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4158) HSDR_N_2 PF13588.6 gi|452211114|ref|YP_007491228.1| - 0.13 12.3 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 Type I restriction enzyme R protein N terminus (HSDR_N) Pyr_redox_2 PF07992.14 gi|452211115|ref|YP_007491229.1| - 1e-16 61.1 0.5 1.2e-06 28.1 0.0 3.2 3 0 0 3 3 3 3 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|452211115|ref|YP_007491229.1| - 8.6e-14 51.4 2.2 3e-05 23.3 0.0 3.2 3 0 0 3 3 3 3 FAD binding domain GIDA PF01134.22 gi|452211115|ref|YP_007491229.1| - 1.6e-12 47.2 0.2 0.00082 18.6 0.0 3.2 3 0 0 3 3 3 3 Glucose inhibited division protein A DAO PF01266.24 gi|452211115|ref|YP_007491229.1| - 9.5e-09 35.3 0.2 1.5e-05 24.8 0.1 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|452211115|ref|YP_007491229.1| - 8.5e-08 31.3 1.6 2.3e-06 26.6 0.2 2.5 3 0 0 3 3 3 1 HI0933-like protein NAD_binding_8 PF13450.6 gi|452211115|ref|YP_007491229.1| - 1.7e-05 25.0 0.2 6.5e-05 23.1 0.1 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 gi|452211115|ref|YP_007491229.1| - 0.0001 21.7 0.3 0.00056 19.2 0.1 2.0 2 0 0 2 2 2 1 Thi4 family Lycopene_cycl PF05834.12 gi|452211115|ref|YP_007491229.1| - 0.00031 19.9 0.2 0.0068 15.5 0.2 2.1 2 0 0 2 2 2 1 Lycopene cyclase protein Pyr_redox_3 PF13738.6 gi|452211115|ref|YP_007491229.1| - 0.0011 18.3 0.2 0.0041 16.4 0.3 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|452211115|ref|YP_007491229.1| - 0.002 17.4 0.0 0.0035 16.6 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain NAD_binding_9 PF13454.6 gi|452211115|ref|YP_007491229.1| - 0.012 15.6 0.0 1.1 9.2 0.0 2.4 2 0 0 2 2 2 0 FAD-NAD(P)-binding Pyr_redox PF00070.27 gi|452211115|ref|YP_007491229.1| - 0.065 13.8 0.0 1.6 9.3 0.0 2.5 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|452211115|ref|YP_007491229.1| - 0.088 12.1 1.0 0.44 9.8 0.7 2.0 2 0 0 2 2 2 0 FAD dependent oxidoreductase DEAD PF00270.29 gi|452211117|ref|YP_007491231.1| - 4.7e-25 88.3 0.0 8e-25 87.6 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase DUF1998 PF09369.10 gi|452211117|ref|YP_007491231.1| - 2.1e-22 79.7 0.1 9.3e-22 77.6 0.0 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF1998) Helicase_C PF00271.31 gi|452211117|ref|YP_007491231.1| - 9e-14 51.8 0.0 7.8e-13 48.7 0.0 2.4 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|452211117|ref|YP_007491231.1| - 9.5e-07 29.0 0.0 1.7e-06 28.1 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit LemA PF04011.12 gi|452211118|ref|YP_007491232.1| - 8.7e-64 213.9 1.7 1.1e-63 213.6 1.7 1.1 1 0 0 1 1 1 1 LemA family AI-2E_transport PF01594.16 gi|452211118|ref|YP_007491232.1| - 0.032 13.4 1.5 0.037 13.2 0.3 1.7 1 1 1 2 2 2 0 AI-2E family transporter DUF2207 PF09972.9 gi|452211119|ref|YP_007491233.1| - 6.9e-109 364.8 0.8 6.9e-109 364.8 0.8 1.3 2 0 0 2 2 2 1 Predicted membrane protein (DUF2207) NMN_transporter PF04973.12 gi|452211119|ref|YP_007491233.1| - 0.0046 17.0 2.9 0.017 15.1 1.6 2.2 2 0 0 2 2 2 1 Nicotinamide mononucleotide transporter DUF423 PF04241.15 gi|452211119|ref|YP_007491233.1| - 0.008 16.4 0.3 0.018 15.3 0.3 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF423) CRPA PF05745.11 gi|452211119|ref|YP_007491233.1| - 0.053 13.5 0.1 0.11 12.5 0.1 1.5 1 0 0 1 1 1 0 Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA) RDD PF06271.12 gi|452211119|ref|YP_007491233.1| - 0.54 10.5 6.8 0.4 10.9 4.2 2.0 2 0 0 2 2 2 0 RDD family Cation_ATPase_C PF00689.21 gi|452211119|ref|YP_007491233.1| - 2.6 7.7 8.2 7.6 6.2 5.0 2.4 2 0 0 2 2 2 0 Cation transporting ATPase, C-terminus DUF2207 PF09972.9 gi|452211120|ref|YP_007491234.1| - 3.9e-83 279.9 6.1 6e-83 279.3 6.1 1.3 1 1 0 1 1 1 1 Predicted membrane protein (DUF2207) DUF4834 PF16118.5 gi|452211120|ref|YP_007491234.1| - 0.021 15.8 0.0 0.07 14.1 0.0 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Zip PF02535.22 gi|452211120|ref|YP_007491234.1| - 0.063 12.5 0.1 0.098 11.9 0.1 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter Ribosomal_L15e PF00827.17 gi|452211122|ref|YP_007491236.1| - 6.4e-82 273.9 6.7 7.2e-82 273.7 6.7 1.0 1 0 0 1 1 1 1 Ribosomal L15 FXMRP1_C_core PF12235.8 gi|452211122|ref|YP_007491236.1| - 0.041 14.5 9.1 0.075 13.7 1.2 2.1 2 0 0 2 2 2 0 Fragile X-related 1 protein core C terminal RNA_binding PF01877.17 gi|452211123|ref|YP_007491237.1| - 1.5e-35 122.0 0.3 1.7e-35 121.8 0.3 1.0 1 0 0 1 1 1 1 RNA binding DUF5063 PF16702.5 gi|452211123|ref|YP_007491237.1| - 0.067 13.6 0.0 0.086 13.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5063) RNase_P_p30 PF01876.16 gi|452211124|ref|YP_007491238.1| - 3.1e-44 151.0 0.0 3.6e-44 150.8 0.0 1.0 1 0 0 1 1 1 1 RNase P subunit p30 NAD_binding_11 PF14833.6 gi|452211124|ref|YP_007491238.1| - 0.19 12.0 0.2 18 5.6 0.0 2.3 1 1 1 2 2 2 0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RNase_P_Rpp14 PF01900.19 gi|452211125|ref|YP_007491239.1| - 2.1e-18 66.4 0.0 2.4e-18 66.2 0.0 1.0 1 0 0 1 1 1 1 Rpp14/Pop5 family TMEM191C PF15194.6 gi|452211125|ref|YP_007491239.1| - 0.079 13.2 0.0 0.11 12.6 0.0 1.3 1 1 0 1 1 1 0 TMEM191C family BMC PF00936.19 gi|452211125|ref|YP_007491239.1| - 0.14 12.2 0.0 0.2 11.6 0.0 1.3 1 0 0 1 1 1 0 BMC domain Proteasome PF00227.26 gi|452211127|ref|YP_007491241.1| - 5.7e-62 208.6 1.1 7.5e-62 208.2 1.1 1.2 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 gi|452211127|ref|YP_007491241.1| - 1.2e-14 53.7 0.5 4.1e-14 51.9 0.1 2.0 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature SBDS PF01172.18 gi|452211128|ref|YP_007491242.1| - 2.3e-23 82.1 0.0 4.2e-23 81.2 0.0 1.5 1 0 0 1 1 1 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein SBDS_C PF09377.10 gi|452211128|ref|YP_007491242.1| - 1.7e-18 66.7 0.1 2.3e-18 66.3 0.1 1.2 1 0 0 1 1 1 1 SBDS protein C-terminal domain EFG_C PF00679.24 gi|452211128|ref|YP_007491242.1| - 0.016 15.2 0.0 0.031 14.3 0.0 1.4 1 0 0 1 1 1 0 Elongation factor G C-terminus KH_6 PF15985.5 gi|452211129|ref|YP_007491243.1| - 2e-10 40.9 0.1 3.7e-10 40.0 0.1 1.5 1 0 0 1 1 1 1 KH domain ECR1_N PF14382.6 gi|452211129|ref|YP_007491243.1| - 8.1e-08 31.9 0.0 2.1e-07 30.6 0.0 1.7 1 0 0 1 1 1 1 Exosome complex exonuclease RRP4 N-terminal region KH_1 PF00013.29 gi|452211129|ref|YP_007491243.1| - 1.9e-06 27.6 0.4 4.3e-06 26.5 0.4 1.6 1 0 0 1 1 1 1 KH domain S1 PF00575.23 gi|452211129|ref|YP_007491243.1| - 2.7e-06 27.6 1.2 8.5e-06 26.0 0.1 2.4 3 0 0 3 3 3 1 S1 RNA binding domain KH_2 PF07650.17 gi|452211129|ref|YP_007491243.1| - 0.00029 20.6 0.2 0.00096 18.9 0.1 2.0 1 1 0 1 1 1 1 KH domain RNase_PH PF01138.21 gi|452211130|ref|YP_007491244.1| - 2.2e-31 109.1 0.0 2.2e-31 109.1 0.0 2.8 3 1 0 3 3 3 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 gi|452211130|ref|YP_007491244.1| - 7e-17 61.2 0.2 2.3e-16 59.5 0.2 2.0 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 RNase_PH PF01138.21 gi|452211131|ref|YP_007491245.1| - 3.1e-30 105.4 0.0 4.8e-30 104.8 0.0 1.3 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 gi|452211131|ref|YP_007491245.1| - 2e-13 50.1 0.4 4.3e-13 49.1 0.4 1.6 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 Ribosomal_L37ae PF01780.19 gi|452211132|ref|YP_007491246.1| - 4.5e-29 100.4 1.3 5.5e-29 100.1 1.3 1.1 1 0 0 1 1 1 1 Ribosomal L37ae protein family Zn_Tnp_IS1595 PF12760.7 gi|452211132|ref|YP_007491246.1| - 0.00046 20.1 1.5 0.00068 19.6 1.5 1.3 1 0 0 1 1 1 1 Transposase zinc-ribbon domain C1_1 PF00130.22 gi|452211132|ref|YP_007491246.1| - 0.0032 17.3 0.7 0.0049 16.7 0.7 1.2 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) HalOD2 PF18547.1 gi|452211132|ref|YP_007491246.1| - 0.016 15.1 6.8 0.12 12.3 6.8 2.1 1 1 0 1 1 1 0 Halobacterial output domain 2 DUF4379 PF14311.6 gi|452211132|ref|YP_007491246.1| - 0.038 14.4 0.8 0.084 13.2 0.1 1.8 2 0 0 2 2 2 0 Probable Zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|452211132|ref|YP_007491246.1| - 0.094 12.8 0.6 3.5 7.8 0.0 2.2 2 0 0 2 2 2 0 Zinc ribbon domain DUF951 PF06107.11 gi|452211132|ref|YP_007491246.1| - 0.11 12.4 2.7 0.21 11.5 2.7 1.4 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF951) zinc_ribbon_4 PF13717.6 gi|452211132|ref|YP_007491246.1| - 0.13 12.2 0.5 0.13 12.2 0.5 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Nudix_N_2 PF14803.6 gi|452211132|ref|YP_007491246.1| - 0.15 12.0 2.7 5.3 7.1 0.2 2.4 2 0 0 2 2 2 0 Nudix N-terminal TFIIS_C PF01096.18 gi|452211132|ref|YP_007491246.1| - 0.24 11.3 3.0 3 7.8 0.6 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) A2L_zn_ribbon PF08792.10 gi|452211132|ref|YP_007491246.1| - 0.67 9.7 3.8 3.9 7.3 1.2 2.1 2 0 0 2 2 2 0 A2L zinc ribbon domain DNA_RNApol_7kD PF03604.13 gi|452211133|ref|YP_007491247.1| - 2.8e-09 36.5 8.6 4.1e-09 36.0 8.6 1.3 1 0 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit zf_UBZ PF18439.1 gi|452211133|ref|YP_007491247.1| - 6.6e-05 22.4 2.2 0.16 11.6 0.6 2.1 1 1 1 2 2 2 2 Ubiquitin-Binding Zinc Finger zf-ribbon_3 PF13248.6 gi|452211133|ref|YP_007491247.1| - 0.00023 20.4 0.7 0.0079 15.6 0.1 2.1 2 0 0 2 2 2 1 zinc-ribbon domain HypA PF01155.19 gi|452211133|ref|YP_007491247.1| - 0.0011 18.9 0.5 0.0011 18.9 0.5 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TF_Zn_Ribbon PF08271.12 gi|452211133|ref|YP_007491247.1| - 0.0014 18.1 1.0 0.0017 17.8 1.0 1.2 1 0 0 1 1 1 1 TFIIB zinc-binding zinc_ribbon_2 PF13240.6 gi|452211133|ref|YP_007491247.1| - 0.0018 17.9 2.3 0.0031 17.2 2.3 1.4 1 1 0 1 1 1 1 zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|452211133|ref|YP_007491247.1| - 0.0022 17.9 2.5 0.0043 16.9 2.5 1.6 1 1 0 1 1 1 1 Putative transposase DNA-binding domain Cys_rich_CPXG PF14255.6 gi|452211133|ref|YP_007491247.1| - 0.0074 16.2 2.1 0.048 13.6 0.2 2.1 2 0 0 2 2 2 1 Cysteine-rich CPXCG DZR PF12773.7 gi|452211133|ref|YP_007491247.1| - 0.014 15.4 1.1 0.02 14.9 1.1 1.4 1 1 0 1 1 1 0 Double zinc ribbon DUF951 PF06107.11 gi|452211133|ref|YP_007491247.1| - 0.016 15.1 3.1 0.1 12.5 0.1 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF951) zinc_ribbon_6 PF14599.6 gi|452211133|ref|YP_007491247.1| - 0.027 14.5 1.7 0.037 14.0 1.7 1.2 1 0 0 1 1 1 0 Zinc-ribbon zinc-ribbons_6 PF07191.12 gi|452211133|ref|YP_007491247.1| - 0.028 14.4 0.5 0.037 14.0 0.5 1.2 1 0 0 1 1 1 0 zinc-ribbons zinc_ribbon_9 PF14369.6 gi|452211133|ref|YP_007491247.1| - 0.035 14.4 0.8 0.047 13.9 0.8 1.2 1 0 0 1 1 1 0 zinc-ribbon Zn-ribbon_8 PF09723.10 gi|452211133|ref|YP_007491247.1| - 0.036 14.2 4.8 0.07 13.3 4.8 1.6 1 1 0 1 1 1 0 Zinc ribbon domain zinc_ribbon_4 PF13717.6 gi|452211133|ref|YP_007491247.1| - 0.04 13.8 4.2 0.81 9.7 4.2 2.1 1 1 0 1 1 1 0 zinc-ribbon domain TFIIS_C PF01096.18 gi|452211133|ref|YP_007491247.1| - 0.043 13.7 2.9 4.2 7.3 0.1 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) RNHCP PF12647.7 gi|452211133|ref|YP_007491247.1| - 0.044 13.8 0.2 0.048 13.6 0.2 1.1 1 0 0 1 1 1 0 RNHCP domain CpXC PF14353.6 gi|452211133|ref|YP_007491247.1| - 0.047 13.7 1.7 0.5 10.4 0.0 2.0 1 1 1 2 2 2 0 CpXC protein YacG PF03884.14 gi|452211133|ref|YP_007491247.1| - 0.049 13.4 0.6 3.3 7.5 0.1 2.1 2 0 0 2 2 2 0 DNA gyrase inhibitor YacG DUF2072 PF09845.9 gi|452211133|ref|YP_007491247.1| - 0.055 13.7 0.5 0.055 13.7 0.5 1.1 1 0 0 1 1 1 0 Zn-ribbon containing protein zf-Di19 PF05605.12 gi|452211133|ref|YP_007491247.1| - 0.064 13.6 0.4 0.45 10.9 0.1 1.9 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding Anti-TRAP PF15777.5 gi|452211133|ref|YP_007491247.1| - 0.079 12.9 0.1 0.082 12.9 0.1 1.1 1 0 0 1 1 1 0 Tryptophan RNA-binding attenuator protein inhibitory protein C1_1 PF00130.22 gi|452211133|ref|YP_007491247.1| - 0.089 12.7 1.9 0.18 11.7 2.0 1.5 1 1 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) FANCL_C PF11793.8 gi|452211133|ref|YP_007491247.1| - 0.098 12.8 1.7 0.74 10.0 0.1 2.0 1 1 1 2 2 2 0 FANCL C-terminal domain Zn_Tnp_IS1595 PF12760.7 gi|452211133|ref|YP_007491247.1| - 0.11 12.5 5.8 0.14 12.2 0.1 2.1 2 0 0 2 2 2 0 Transposase zinc-ribbon domain DiS_P_DiS PF06750.13 gi|452211133|ref|YP_007491247.1| - 0.12 12.5 2.5 5.2 7.2 0.3 2.1 1 1 1 2 2 2 0 Bacterial Peptidase A24 N-terminal domain DUF1451 PF07295.11 gi|452211133|ref|YP_007491247.1| - 0.13 12.3 0.7 0.15 12.1 0.7 1.1 1 0 0 1 1 1 0 Zinc-ribbon containing domain Zn_ribbon_SprT PF17283.2 gi|452211133|ref|YP_007491247.1| - 0.26 11.2 8.0 1 9.3 0.3 2.4 2 1 0 2 2 2 0 SprT-like zinc ribbon domain zinc_ribbon_10 PF10058.9 gi|452211133|ref|YP_007491247.1| - 0.58 9.9 4.3 14 5.5 4.0 2.2 1 1 1 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein UPF0547 PF10571.9 gi|452211133|ref|YP_007491247.1| - 0.92 9.6 7.4 6.9 6.9 7.4 2.0 1 1 0 1 1 1 0 Uncharacterised protein family UPF0547 PutA_N PF18083.1 gi|452211135|ref|YP_007491249.1| - 0.16 12.0 0.0 0.26 11.3 0.0 1.3 1 0 0 1 1 1 0 Proline utilization A N-terminal domain Pcc1 PF09341.10 gi|452211136|ref|YP_007491250.1| - 2.3e-11 43.6 0.3 2.6e-11 43.5 0.3 1.0 1 0 0 1 1 1 1 Transcription factor Pcc1 CHASE4 PF05228.13 gi|452211137|ref|YP_007491251.1| - 4.7e-36 124.0 0.0 3.7e-33 114.6 0.0 2.3 2 0 0 2 2 2 2 CHASE4 domain HATPase_c PF02518.26 gi|452211137|ref|YP_007491251.1| - 2.9e-27 95.4 0.0 6.7e-27 94.2 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|452211137|ref|YP_007491251.1| - 1.7e-20 72.8 0.0 3.9e-20 71.7 0.0 1.7 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS_4 PF08448.10 gi|452211137|ref|YP_007491251.1| - 3.1e-13 49.9 0.0 1.8e-12 47.5 0.0 2.2 1 1 0 1 1 1 1 PAS fold PAS_9 PF13426.7 gi|452211137|ref|YP_007491251.1| - 1.6e-07 31.5 0.3 9.7e-07 29.0 0.1 2.6 2 1 0 2 2 1 1 PAS domain PAS PF00989.25 gi|452211137|ref|YP_007491251.1| - 3.6e-05 23.7 0.0 0.00013 22.0 0.0 2.0 1 1 0 1 1 1 1 PAS fold HAMP PF00672.25 gi|452211137|ref|YP_007491251.1| - 0.00057 20.2 0.0 0.0014 19.0 0.0 1.6 1 0 0 1 1 1 1 HAMP domain PAS_10 PF13596.6 gi|452211137|ref|YP_007491251.1| - 0.0049 17.4 0.0 0.023 15.3 0.0 2.2 1 1 0 1 1 1 1 PAS domain HATPase_c_5 PF14501.6 gi|452211137|ref|YP_007491251.1| - 0.006 16.5 0.0 0.019 14.9 0.0 2.0 1 0 0 1 1 1 1 GHKL domain PAS_8 PF13188.7 gi|452211137|ref|YP_007491251.1| - 0.0065 16.5 0.0 0.02 14.9 0.0 1.9 1 0 0 1 1 1 1 PAS domain HATPase_c_3 PF13589.6 gi|452211137|ref|YP_007491251.1| - 0.036 13.9 0.0 0.12 12.2 0.0 1.9 2 0 0 2 2 2 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|452211137|ref|YP_007491251.1| - 0.064 13.2 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain sCache_3_3 PF17202.4 gi|452211137|ref|YP_007491251.1| - 0.079 13.4 0.0 0.21 12.0 0.0 1.7 1 0 0 1 1 1 0 Single cache domain 3 Cache_3-Cache_2 PF17201.4 gi|452211137|ref|YP_007491251.1| - 0.097 11.9 0.0 0.17 11.1 0.0 1.3 1 0 0 1 1 1 0 Cache 3/Cache 2 fusion domain NosD PF05048.13 gi|452211138|ref|YP_007491252.1| - 4.9e-43 147.1 72.5 7.2e-40 136.8 38.3 4.3 3 2 2 5 5 5 2 Periplasmic copper-binding protein (NosD) PKD PF00801.20 gi|452211138|ref|YP_007491252.1| - 4.6e-18 64.8 12.0 5.4e-12 45.4 1.0 2.5 2 0 0 2 2 2 2 PKD domain Beta_helix PF13229.6 gi|452211138|ref|YP_007491252.1| - 3.6e-13 49.7 62.9 2e-08 34.3 29.8 5.0 2 2 2 4 4 4 2 Right handed beta helix region PKD_3 PF16820.5 gi|452211138|ref|YP_007491252.1| - 0.023 14.4 0.6 3.4 7.5 0.1 2.9 2 0 0 2 2 2 0 PKD-like domain VID27_PH PF17747.1 gi|452211138|ref|YP_007491252.1| - 0.086 13.1 0.1 12 6.3 0.0 3.3 2 0 0 2 2 2 0 VID27 PH-like domain BssC_TutF PF08201.11 gi|452211139|ref|YP_007491253.1| - 0.038 14.0 2.1 0.067 13.2 1.8 1.7 1 1 0 1 1 1 0 BssC/TutF protein Prok-JAB PF14464.6 gi|452211140|ref|YP_007491254.1| - 2.6e-10 40.1 0.0 3.4e-10 39.7 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain RadC PF04002.15 gi|452211140|ref|YP_007491254.1| - 0.0069 16.3 0.0 0.01 15.8 0.0 1.4 1 1 0 1 1 1 1 RadC-like JAB domain malic PF00390.19 gi|452211141|ref|YP_007491255.1| - 6.4e-31 107.6 0.2 1.8e-28 99.6 0.2 2.4 1 1 0 1 1 1 1 Malic enzyme, N-terminal domain Malic_M PF03949.15 gi|452211141|ref|YP_007491255.1| - 7.3e-23 81.1 2.6 6.6e-22 78.0 2.6 2.2 1 1 0 1 1 1 1 Malic enzyme, NAD binding domain ELFV_dehydrog PF00208.21 gi|452211141|ref|YP_007491255.1| - 0.001 18.9 0.2 0.016 14.9 0.1 2.2 2 0 0 2 2 2 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ThiF PF00899.21 gi|452211141|ref|YP_007491255.1| - 0.036 13.4 0.5 0.08 12.3 0.5 1.5 1 0 0 1 1 1 0 ThiF family Desulfoferrod_N PF06397.12 gi|452211142|ref|YP_007491256.1| - 0.014 15.0 13.9 0.43 10.2 13.9 2.2 1 1 0 1 1 1 0 Desulfoferrodoxin, N-terminal domain Zn_Tnp_IS91 PF14319.6 gi|452211142|ref|YP_007491256.1| - 0.44 10.6 8.0 0.49 10.5 8.0 1.2 1 0 0 1 1 1 0 Transposase zinc-binding domain FUSC-like PF12805.7 gi|452211143|ref|YP_007491257.1| - 0.034 13.2 0.3 0.04 13.0 0.3 1.0 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS DUF1932 PF09130.11 gi|452211143|ref|YP_007491257.1| - 0.13 12.2 1.3 0.69 9.9 0.2 2.4 2 1 1 3 3 3 0 Domain of unknown function (DUF1932) Mastoparan PF08249.11 gi|452211143|ref|YP_007491257.1| - 0.17 12.7 0.3 0.28 12.0 0.3 1.4 1 0 0 1 1 1 0 Mastoparan protein TPP_enzyme_C PF02775.21 gi|452211144|ref|YP_007491258.1| - 4.7e-26 91.4 0.2 8.6e-26 90.6 0.2 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.19 gi|452211144|ref|YP_007491258.1| - 8.1e-18 65.0 0.1 1.3e-17 64.3 0.1 1.3 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Fer4 PF00037.27 gi|452211144|ref|YP_007491258.1| - 1.3e-10 40.7 16.0 4.2e-07 29.5 3.0 3.5 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|452211144|ref|YP_007491258.1| - 1.8e-08 34.1 12.4 0.00034 20.5 2.6 3.6 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|452211144|ref|YP_007491258.1| - 4.9e-07 29.5 15.4 0.00051 20.0 1.2 3.1 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|452211144|ref|YP_007491258.1| - 5.4e-07 29.6 12.9 4.8e-06 26.6 10.4 3.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|452211144|ref|YP_007491258.1| - 3.2e-06 27.2 9.9 3.2e-06 27.2 9.9 2.2 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452211144|ref|YP_007491258.1| - 3.4e-06 27.1 7.1 9.2e-06 25.7 6.4 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain TPP_enzyme_N PF02776.18 gi|452211144|ref|YP_007491258.1| - 4.9e-05 23.0 0.8 0.0013 18.3 0.3 2.2 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Fer4_7 PF12838.7 gi|452211144|ref|YP_007491258.1| - 0.00078 20.0 17.1 0.00078 20.0 11.1 2.8 2 1 1 3 3 2 2 4Fe-4S dicluster domain PFOR_II PF17147.4 gi|452211144|ref|YP_007491258.1| - 0.0018 18.6 0.0 0.004 17.4 0.0 1.6 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Fer4_16 PF13484.6 gi|452211144|ref|YP_007491258.1| - 0.0033 18.3 8.6 0.0094 16.9 2.2 2.6 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_15 PF13459.6 gi|452211144|ref|YP_007491258.1| - 0.0053 17.5 9.7 0.13 13.0 0.6 2.9 1 1 1 2 2 2 2 4Fe-4S single cluster domain Transket_pyr PF02779.24 gi|452211144|ref|YP_007491258.1| - 0.011 15.4 0.2 0.037 13.7 0.1 2.0 2 1 0 2 2 2 0 Transketolase, pyrimidine binding domain Fer4_3 PF12798.7 gi|452211144|ref|YP_007491258.1| - 0.025 15.5 6.7 0.025 15.5 6.7 3.2 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 gi|452211144|ref|YP_007491258.1| - 0.037 14.6 9.9 1.9 9.1 0.6 2.9 1 1 1 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_4 PF12800.7 gi|452211144|ref|YP_007491258.1| - 0.05 14.1 18.0 0.32 11.6 4.1 3.3 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_8 PF13183.6 gi|452211144|ref|YP_007491258.1| - 0.066 13.7 12.4 0.51 10.8 3.2 2.7 1 1 1 2 2 2 0 4Fe-4S dicluster domain AAA_30 PF13604.6 gi|452211144|ref|YP_007491258.1| - 0.28 10.9 0.7 0.53 10.0 0.7 1.4 1 0 0 1 1 1 0 AAA domain Fer4_19 PF06902.11 gi|452211144|ref|YP_007491258.1| - 0.59 10.3 3.8 2.5 8.2 3.8 2.1 1 1 0 1 1 1 0 Divergent 4Fe-4S mono-cluster Fer4_22 PF17179.4 gi|452211144|ref|YP_007491258.1| - 1 10.2 10.5 3.5 8.5 1.7 2.8 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|452211144|ref|YP_007491258.1| - 2.3 8.8 18.6 0.19 12.3 2.9 3.0 2 1 2 4 4 4 0 4Fe-4S dicluster domain POR PF01558.18 gi|452211145|ref|YP_007491259.1| - 1.9e-41 142.0 0.0 2.4e-41 141.7 0.0 1.1 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase AMP-binding_C_2 PF14535.6 gi|452211146|ref|YP_007491260.1| - 1.6e-24 86.0 0.2 9.2e-24 83.6 0.0 2.2 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 gi|452211146|ref|YP_007491260.1| - 7.7e-11 41.2 0.0 1.2e-10 40.6 0.0 1.3 1 0 0 1 1 1 1 AMP-binding enzyme GH3 PF03321.13 gi|452211146|ref|YP_007491260.1| - 0.00039 19.4 0.0 0.0027 16.6 0.0 1.9 2 0 0 2 2 2 1 GH3 auxin-responsive promoter Sda PF08970.10 gi|452211146|ref|YP_007491260.1| - 5.5 6.8 5.7 7.3 6.4 0.7 2.9 3 0 0 3 3 3 0 Sporulation inhibitor A MS_channel PF00924.18 gi|452211147|ref|YP_007491261.1| - 7.2e-43 146.5 0.5 1e-42 146.1 0.5 1.2 1 0 0 1 1 1 1 Mechanosensitive ion channel RhodobacterPufX PF11511.8 gi|452211147|ref|YP_007491261.1| - 0.21 11.2 4.3 3.3 7.4 0.2 2.6 1 1 1 2 2 2 0 Intrinsic membrane protein PufX Fasciclin PF02469.22 gi|452211148|ref|YP_007491262.1| - 5.7e-63 210.9 5.6 6.2e-33 113.7 0.1 3.1 3 0 0 3 3 3 2 Fasciclin domain DUF4430 PF14478.6 gi|452211148|ref|YP_007491262.1| - 3.8e-14 53.0 17.6 9.3e-06 26.2 0.2 4.2 3 1 1 4 4 4 3 Domain of unknown function (DUF4430) TM_helix PF05552.12 gi|452211150|ref|YP_007491264.1| - 7.2e-25 86.7 40.0 5.4e-12 45.5 1.6 5.1 5 0 0 5 5 5 3 Conserved TM helix CorA PF01544.18 gi|452211152|ref|YP_007491266.1| - 3.1e-74 249.9 3.5 4e-74 249.6 3.5 1.0 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein T2SSF PF00482.23 gi|452211152|ref|YP_007491266.1| - 1.7 8.6 3.8 1.2 9.2 0.4 2.4 2 1 0 2 2 2 0 Type II secretion system (T2SS), protein F DUF432 PF04254.13 gi|452211153|ref|YP_007491267.1| - 1.5e-41 141.4 0.0 2.1e-41 140.9 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF432) MS_channel PF00924.18 gi|452211154|ref|YP_007491268.1| - 4.1e-54 183.3 0.7 4.1e-54 183.3 0.7 1.5 2 0 0 2 2 2 1 Mechanosensitive ion channel DUF1600 PF07667.11 gi|452211154|ref|YP_007491268.1| - 0.03 14.5 0.8 0.053 13.7 0.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1600) ThiS PF02597.20 gi|452211156|ref|YP_007491270.1| - 1e-21 77.3 0.0 1.2e-21 77.1 0.0 1.0 1 0 0 1 1 1 1 ThiS family Urm1 PF09138.11 gi|452211156|ref|YP_007491270.1| - 0.044 14.1 0.0 0.057 13.8 0.0 1.2 1 0 0 1 1 1 0 Urm1 (Ubiquitin related modifier) AFOR_C PF01314.18 gi|452211157|ref|YP_007491271.1| - 5e-137 457.0 0.0 5.7e-137 456.8 0.0 1.0 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 PocR PF10114.9 gi|452211158|ref|YP_007491272.1| - 1.3e-39 135.6 0.9 1.9e-39 135.1 0.0 1.8 2 0 0 2 2 2 1 Sensory domain found in PocR PAS_9 PF13426.7 gi|452211158|ref|YP_007491272.1| - 3.1e-31 107.7 2.1 3e-16 59.5 0.2 4.6 4 0 0 4 4 4 3 PAS domain PAS_3 PF08447.12 gi|452211158|ref|YP_007491272.1| - 1.3e-30 105.5 0.6 2.9e-13 49.9 0.1 3.9 4 0 0 4 4 4 3 PAS fold PAS PF00989.25 gi|452211158|ref|YP_007491272.1| - 1.9e-30 105.2 0.0 9.9e-14 51.3 0.0 3.7 3 0 0 3 3 3 3 PAS fold HisKA_2 PF07568.12 gi|452211158|ref|YP_007491272.1| - 4.4e-28 97.2 2.2 8.3e-28 96.3 0.7 2.4 2 0 0 2 2 2 1 Histidine kinase PAS_4 PF08448.10 gi|452211158|ref|YP_007491272.1| - 1.2e-26 93.1 0.0 2.3e-09 37.4 0.0 3.5 3 0 0 3 3 3 3 PAS fold PAS_8 PF13188.7 gi|452211158|ref|YP_007491272.1| - 2.9e-15 55.9 0.0 2.7e-06 27.3 0.0 3.1 3 0 0 3 3 3 2 PAS domain HATPase_c PF02518.26 gi|452211158|ref|YP_007491272.1| - 1.6e-07 31.8 0.1 7.3e-07 29.7 0.1 2.1 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_7 PF12860.7 gi|452211158|ref|YP_007491272.1| - 0.00015 21.9 0.2 0.05 13.8 0.0 3.9 2 1 0 2 2 2 1 PAS fold HATPase_c_2 PF13581.6 gi|452211158|ref|YP_007491272.1| - 0.0015 18.5 0.0 0.0032 17.4 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HWE_HK PF07536.14 gi|452211158|ref|YP_007491272.1| - 0.002 18.8 0.3 0.0075 17.0 0.0 2.2 2 0 0 2 2 2 1 HWE histidine kinase PAS_10 PF13596.6 gi|452211158|ref|YP_007491272.1| - 0.0026 18.3 0.0 0.021 15.4 0.0 2.4 2 0 0 2 2 2 1 PAS domain OEP PF02321.18 gi|452211158|ref|YP_007491272.1| - 0.046 13.5 3.2 0.16 11.7 2.4 2.3 2 0 0 2 2 2 0 Outer membrane efflux protein MULE PF10551.9 gi|452211159|ref|YP_007491273.1| - 7.4e-05 23.1 0.0 0.00012 22.5 0.0 1.4 1 0 0 1 1 1 1 MULE transposase domain DDE_Tnp_IS240 PF13610.6 gi|452211159|ref|YP_007491273.1| - 0.011 16.0 0.0 0.013 15.8 0.0 1.1 1 0 0 1 1 1 0 DDE domain YozE_SAM_like PF06855.12 gi|452211159|ref|YP_007491273.1| - 0.038 14.2 0.5 2.1 8.6 0.0 2.9 2 1 1 3 3 3 0 YozE SAM-like fold Cofilin_ADF PF00241.20 gi|452211159|ref|YP_007491273.1| - 0.087 12.6 0.2 0.13 12.1 0.2 1.4 1 1 0 1 1 1 0 Cofilin/tropomyosin-type actin-binding protein ApbE PF02424.15 gi|452211160|ref|YP_007491274.1| - 0.0027 17.3 3.3 0.0043 16.6 0.2 2.3 2 1 0 2 2 2 1 ApbE family Aminotran_1_2 PF00155.21 gi|452211161|ref|YP_007491275.1| - 4.1e-58 197.3 0.0 4.7e-58 197.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 gi|452211161|ref|YP_007491275.1| - 0.0016 17.1 0.0 0.0022 16.6 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Abhydrolase_1 PF00561.20 gi|452211162|ref|YP_007491276.1| - 1.9e-23 83.4 0.0 2.6e-16 60.1 0.0 2.1 1 1 1 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|452211162|ref|YP_007491276.1| - 2e-21 77.6 0.4 2.4e-21 77.4 0.4 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|452211162|ref|YP_007491276.1| - 4.5e-13 49.0 0.0 9.2e-13 48.0 0.0 1.4 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_4 PF08386.10 gi|452211162|ref|YP_007491276.1| - 3.8e-05 23.8 0.0 6.8e-05 22.9 0.0 1.4 1 0 0 1 1 1 1 TAP-like protein Thioesterase PF00975.20 gi|452211162|ref|YP_007491276.1| - 0.014 15.5 0.0 0.029 14.5 0.0 1.5 1 1 1 2 2 2 0 Thioesterase domain SCFA_trans PF02667.14 gi|452211162|ref|YP_007491276.1| - 0.034 13.2 0.0 0.04 12.9 0.0 1.1 1 0 0 1 1 1 0 Short chain fatty acid transporter FSH1 PF03959.13 gi|452211162|ref|YP_007491276.1| - 0.24 11.0 0.0 4.3 6.9 0.0 2.4 2 1 1 3 3 3 0 Serine hydrolase (FSH1) DUF2124 PF09897.9 gi|452211164|ref|YP_007491278.1| - 5.4e-51 172.2 0.1 6.1e-51 172.0 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2124) MCH PF02289.16 gi|452211165|ref|YP_007491279.1| - 2.7e-132 440.8 0.0 3.1e-132 440.6 0.0 1.0 1 0 0 1 1 1 1 Cyclohydrolase (MCH) Peptidase_U32 PF01136.19 gi|452211166|ref|YP_007491280.1| - 6.8e-83 277.4 0.0 1e-82 276.8 0.0 1.3 1 0 0 1 1 1 1 Peptidase family U32 GTP_EFTU_D2 PF03144.25 gi|452211166|ref|YP_007491280.1| - 0.11 12.9 2.1 0.74 10.2 0.1 2.6 2 1 1 3 3 3 0 Elongation factor Tu domain 2 Acyl_transf_3 PF01757.22 gi|452211167|ref|YP_007491281.1| - 1.7e-14 53.7 47.1 3.5e-14 52.6 47.1 1.5 1 1 0 1 1 1 1 Acyltransferase family OpgC_C PF10129.9 gi|452211167|ref|YP_007491281.1| - 3e-05 23.1 30.6 7.7e-05 21.7 30.6 1.8 1 1 0 1 1 1 1 OpgC protein FKBP_C PF00254.28 gi|452211168|ref|YP_007491282.1| - 1.2e-14 54.4 0.2 6.8e-11 42.4 0.1 2.6 2 1 0 2 2 2 2 FKBP-type peptidyl-prolyl cis-trans isomerase FKBP26_C PF18046.1 gi|452211168|ref|YP_007491282.1| - 2.1e-08 34.1 0.0 4.3e-08 33.1 0.0 1.6 1 0 0 1 1 1 1 FKBP26_C-terminal NikR_C PF08753.11 gi|452211169|ref|YP_007491283.1| - 2.5e-28 98.1 1.9 3.6e-28 97.6 1.9 1.2 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.21 gi|452211169|ref|YP_007491283.1| - 5.5e-06 26.1 0.0 1e-05 25.3 0.0 1.4 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family HicB_lk_antitox PF15919.5 gi|452211169|ref|YP_007491283.1| - 0.033 14.3 0.0 0.13 12.3 0.0 1.8 2 0 0 2 2 2 0 HicB_like antitoxin of bacterial toxin-antitoxin system Bromo_TP PF07524.13 gi|452211169|ref|YP_007491283.1| - 0.04 13.9 0.0 0.074 13.1 0.0 1.4 1 0 0 1 1 1 0 Bromodomain associated SWI-SNF_Ssr4 PF08549.10 gi|452211169|ref|YP_007491283.1| - 0.078 11.6 0.1 0.086 11.5 0.1 1.1 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1750) RHH_8 PF17723.1 gi|452211169|ref|YP_007491283.1| - 0.092 12.9 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 Ribbon-Helix-Helix transcriptional regulator family Acetyltransf_1 PF00583.25 gi|452211170|ref|YP_007491284.1| - 3.8e-14 52.9 0.0 4.8e-14 52.6 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family FR47 PF08445.10 gi|452211170|ref|YP_007491284.1| - 1.3e-10 41.1 0.0 2e-10 40.5 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_10 PF13673.7 gi|452211170|ref|YP_007491284.1| - 4.3e-10 39.6 0.0 6e-10 39.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|452211170|ref|YP_007491284.1| - 6.3e-10 39.3 0.1 9.5e-10 38.8 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|452211170|ref|YP_007491284.1| - 6.9e-06 26.3 0.1 7.9e-06 26.1 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 gi|452211170|ref|YP_007491284.1| - 2.2e-05 24.0 0.1 2.2e-05 24.0 0.1 1.2 1 0 0 1 1 1 1 Putative acetyl-transferase Acetyltransf_9 PF13527.7 gi|452211170|ref|YP_007491284.1| - 0.00018 21.6 0.0 0.00054 20.0 0.0 1.7 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|452211170|ref|YP_007491284.1| - 0.0022 18.7 0.0 0.0025 18.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|452211170|ref|YP_007491284.1| - 0.0063 16.2 0.0 0.0091 15.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|452211170|ref|YP_007491284.1| - 0.011 15.8 0.0 0.016 15.3 0.0 1.3 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase Nudix_hydro PF18290.1 gi|452211170|ref|YP_007491284.1| - 0.049 13.6 0.0 0.1 12.6 0.0 1.5 1 0 0 1 1 1 0 Nudix hydrolase domain Acetyltransf_1 PF00583.25 gi|452211171|ref|YP_007491285.1| - 4.9e-19 68.7 0.1 6.4e-19 68.3 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|452211171|ref|YP_007491285.1| - 8e-15 55.0 0.4 1.2e-14 54.4 0.4 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|452211171|ref|YP_007491285.1| - 2.9e-13 49.9 0.3 4.4e-13 49.3 0.3 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|452211171|ref|YP_007491285.1| - 3.5e-11 43.5 0.9 4.1e-11 43.3 0.9 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|452211171|ref|YP_007491285.1| - 5e-11 42.4 0.0 7.6e-11 41.8 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 gi|452211171|ref|YP_007491285.1| - 1.7e-09 37.8 0.0 2.2e-09 37.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 gi|452211171|ref|YP_007491285.1| - 7.7e-08 32.0 1.6 1e-07 31.6 1.6 1.2 1 0 0 1 1 1 1 Putative acetyl-transferase Acetyltransf_3 PF13302.7 gi|452211171|ref|YP_007491285.1| - 4.7e-06 27.3 0.0 5.5e-06 27.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|452211171|ref|YP_007491285.1| - 0.0028 17.4 0.0 0.004 16.8 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|452211171|ref|YP_007491285.1| - 0.0067 16.5 0.0 0.016 15.3 0.0 1.6 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase GNAT_acetyltran PF12746.7 gi|452211171|ref|YP_007491285.1| - 0.019 14.6 0.1 0.052 13.1 0.0 1.6 1 1 1 2 2 2 0 GNAT acetyltransferase DUF3804 PF12707.7 gi|452211171|ref|YP_007491285.1| - 0.079 12.7 0.1 0.11 12.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3804) Nudix_hydro PF18290.1 gi|452211171|ref|YP_007491285.1| - 0.11 12.5 0.0 0.3 11.1 0.0 1.7 1 0 0 1 1 1 0 Nudix hydrolase domain Na_Ca_ex PF01699.24 gi|452211172|ref|YP_007491286.1| - 2e-51 173.9 40.4 6.6e-27 94.3 17.6 2.1 2 0 0 2 2 2 2 Sodium/calcium exchanger protein DUF3865 PF12981.7 gi|452211172|ref|YP_007491286.1| - 0.023 14.6 0.3 0.13 12.1 0.1 2.2 2 1 0 2 2 2 0 Domain of Unknown Function with PDB structure (DUF3865) ACT_7 PF13840.6 gi|452211173|ref|YP_007491287.1| - 7.9e-25 86.4 0.0 1.1e-24 85.9 0.0 1.2 1 0 0 1 1 1 1 ACT domain ACT PF01842.25 gi|452211173|ref|YP_007491287.1| - 0.00033 20.4 0.0 0.00073 19.3 0.0 1.6 1 0 0 1 1 1 1 ACT domain Castor1_N PF18700.1 gi|452211173|ref|YP_007491287.1| - 0.0048 16.7 0.6 0.01 15.6 0.0 1.9 2 0 0 2 2 2 1 Cytosolic arginine sensor for mTORC1 subunit 1 N-terminal domain Na_Ala_symp PF01235.17 gi|452211174|ref|YP_007491288.1| - 2.5e-132 441.9 25.9 3.2e-132 441.6 25.9 1.0 1 0 0 1 1 1 1 Sodium:alanine symporter family CARDB PF07705.11 gi|452211175|ref|YP_007491289.1| - 4.1e-13 49.5 0.0 0.0001 22.5 0.0 4.3 3 1 2 5 5 5 3 CARDB TRAP_beta PF05753.14 gi|452211175|ref|YP_007491289.1| - 0.0018 17.7 0.0 1.3 8.4 0.0 3.3 3 0 0 3 3 3 2 Translocon-associated protein beta (TRAPB) DUF11 PF01345.18 gi|452211175|ref|YP_007491289.1| - 0.014 15.7 0.0 14 6.0 0.0 3.4 3 1 0 3 3 3 0 Domain of unknown function DUF11 DUF2393 PF09624.10 gi|452211175|ref|YP_007491289.1| - 0.019 14.9 0.2 16 5.5 0.0 3.2 4 0 0 4 4 4 0 Protein of unknown function (DUF2393) NPCBM_assoc PF10633.9 gi|452211175|ref|YP_007491289.1| - 0.02 15.1 0.0 7.2 6.9 0.0 3.7 5 1 1 6 6 6 0 NPCBM-associated, NEW3 domain of alpha-galactosidase FtsX PF02687.21 gi|452211176|ref|YP_007491290.1| - 6.5e-05 23.3 1.0 6.5e-05 23.3 1.0 3.1 3 0 0 3 3 3 2 FtsX-like permease family ABC_tran PF00005.27 gi|452211177|ref|YP_007491291.1| - 1.1e-32 113.4 0.1 2.3e-32 112.4 0.0 1.6 2 0 0 2 2 1 1 ABC transporter SMC_N PF02463.19 gi|452211177|ref|YP_007491291.1| - 1.2e-07 31.4 0.2 1.1e-06 28.3 0.2 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|452211177|ref|YP_007491291.1| - 5.9e-07 29.6 0.0 0.038 13.8 0.1 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_18 PF13238.6 gi|452211177|ref|YP_007491291.1| - 1.7e-05 25.4 1.2 0.0074 16.8 0.1 2.6 2 1 0 3 3 2 1 AAA domain AAA_16 PF13191.6 gi|452211177|ref|YP_007491291.1| - 5.5e-05 23.6 0.2 0.00011 22.6 0.2 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|452211177|ref|YP_007491291.1| - 0.0001 21.9 0.1 0.00031 20.4 0.1 1.8 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.6 gi|452211177|ref|YP_007491291.1| - 0.00015 21.4 0.1 0.008 15.8 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|452211177|ref|YP_007491291.1| - 0.00017 21.9 0.5 0.0012 19.1 0.5 2.3 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|452211177|ref|YP_007491291.1| - 0.00046 20.1 0.1 0.00079 19.4 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase SRP54 PF00448.22 gi|452211177|ref|YP_007491291.1| - 0.00066 19.4 0.0 0.017 14.8 0.0 2.4 1 1 0 1 1 1 1 SRP54-type protein, GTPase domain IstB_IS21 PF01695.17 gi|452211177|ref|YP_007491291.1| - 0.0011 18.7 0.1 0.019 14.7 0.0 2.3 2 1 0 2 2 2 1 IstB-like ATP binding protein cobW PF02492.19 gi|452211177|ref|YP_007491291.1| - 0.0019 17.8 0.0 0.0043 16.6 0.0 1.6 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_28 PF13521.6 gi|452211177|ref|YP_007491291.1| - 0.0021 18.3 0.0 0.0054 17.0 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|452211177|ref|YP_007491291.1| - 0.0022 17.7 0.5 0.22 11.2 0.0 2.5 2 1 1 3 3 3 1 AAA ATPase domain AAA_24 PF13479.6 gi|452211177|ref|YP_007491291.1| - 0.0052 16.5 0.5 0.016 15.0 0.0 2.0 3 0 0 3 3 2 1 AAA domain PCB_OB PF17092.5 gi|452211177|ref|YP_007491291.1| - 0.007 17.1 0.1 0.015 16.0 0.1 1.5 1 0 0 1 1 1 1 Penicillin-binding protein OB-like domain ATPase PF06745.13 gi|452211177|ref|YP_007491291.1| - 0.011 15.1 0.7 0.93 8.8 0.1 3.0 2 1 1 3 3 3 0 KaiC AAA_23 PF13476.6 gi|452211177|ref|YP_007491291.1| - 0.016 15.7 0.4 0.016 15.7 0.4 2.0 2 1 0 2 2 1 0 AAA domain T2SSE PF00437.20 gi|452211177|ref|YP_007491291.1| - 0.018 14.1 0.1 0.036 13.1 0.1 1.4 1 1 0 1 1 1 0 Type II/IV secretion system protein AAA_33 PF13671.6 gi|452211177|ref|YP_007491291.1| - 0.019 15.1 0.1 0.05 13.8 0.1 1.9 1 1 0 1 1 1 0 AAA domain SRPRB PF09439.10 gi|452211177|ref|YP_007491291.1| - 0.02 14.3 0.0 0.038 13.4 0.0 1.5 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit AAA_14 PF13173.6 gi|452211177|ref|YP_007491291.1| - 0.021 14.9 0.0 0.056 13.5 0.0 1.8 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|452211177|ref|YP_007491291.1| - 0.022 14.5 0.3 0.059 13.1 0.0 1.8 2 1 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 gi|452211177|ref|YP_007491291.1| - 0.024 14.9 0.2 0.3 11.3 0.2 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit ATPase_2 PF01637.18 gi|452211177|ref|YP_007491291.1| - 0.031 14.2 0.0 0.061 13.2 0.0 1.6 2 0 0 2 2 1 0 ATPase domain predominantly from Archaea NACHT PF05729.12 gi|452211177|ref|YP_007491291.1| - 0.032 14.1 0.2 0.084 12.8 0.1 1.7 1 1 0 1 1 1 0 NACHT domain MMR_HSR1 PF01926.23 gi|452211177|ref|YP_007491291.1| - 0.033 14.3 0.2 0.098 12.7 0.2 1.9 1 1 0 1 1 1 0 50S ribosome-binding GTPase TniB PF05621.11 gi|452211177|ref|YP_007491291.1| - 0.047 13.1 0.2 9.7 5.6 0.0 2.4 1 1 0 2 2 2 0 Bacterial TniB protein NB-ARC PF00931.22 gi|452211177|ref|YP_007491291.1| - 0.065 12.4 0.1 0.13 11.4 0.1 1.5 1 0 0 1 1 1 0 NB-ARC domain G-alpha PF00503.20 gi|452211177|ref|YP_007491291.1| - 0.068 12.3 0.1 0.084 12.0 0.1 1.4 1 1 0 1 1 1 0 G-protein alpha subunit MobB PF03205.14 gi|452211177|ref|YP_007491291.1| - 0.091 12.7 0.1 0.25 11.2 0.0 1.8 2 0 0 2 2 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA PF00004.29 gi|452211177|ref|YP_007491291.1| - 0.92 9.9 6.2 18 5.7 3.5 3.4 2 1 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) TMEM43 PF07787.12 gi|452211179|ref|YP_007491293.1| - 1.6 8.0 4.0 2.8 7.3 4.0 1.3 1 0 0 1 1 1 0 Transmembrane protein 43 AAA_3 PF07726.11 gi|452211180|ref|YP_007491294.1| - 3e-63 211.5 0.2 4.6e-63 210.9 0.2 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_2 PF17863.1 gi|452211180|ref|YP_007491294.1| - 1.1e-17 63.6 0.0 1.9e-17 62.8 0.0 1.4 1 0 0 1 1 1 1 AAA lid domain AAA_5 PF07728.14 gi|452211180|ref|YP_007491294.1| - 3.1e-10 40.2 0.0 5.8e-10 39.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) MCM PF00493.23 gi|452211180|ref|YP_007491294.1| - 3.7e-07 29.5 0.1 3.2e-06 26.4 0.1 2.2 1 1 0 1 1 1 1 MCM P-loop domain AAA PF00004.29 gi|452211180|ref|YP_007491294.1| - 2.3e-06 28.1 0.0 5.2e-06 26.9 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 gi|452211180|ref|YP_007491294.1| - 8.6e-05 22.0 0.4 0.0067 15.8 0.1 2.2 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 gi|452211180|ref|YP_007491294.1| - 0.00059 19.6 0.1 0.013 15.3 0.1 2.1 1 1 0 1 1 1 1 Sigma-54 interaction domain RuvB_N PF05496.12 gi|452211180|ref|YP_007491294.1| - 0.0026 17.5 0.0 0.37 10.5 0.0 2.4 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_19 PF13245.6 gi|452211180|ref|YP_007491294.1| - 0.016 15.5 0.0 0.62 10.4 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_2 PF07724.14 gi|452211180|ref|YP_007491294.1| - 0.087 12.9 0.0 0.17 12.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) HTH_ABP1_N PF18107.1 gi|452211180|ref|YP_007491294.1| - 0.16 11.7 0.0 0.43 10.3 0.0 1.7 1 0 0 1 1 1 0 Fission yeast centromere protein N-terminal domain DUF58 PF01882.18 gi|452211181|ref|YP_007491295.1| - 3e-19 69.1 0.0 5.2e-19 68.3 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function DUF58 VWA_2 PF13519.6 gi|452211181|ref|YP_007491295.1| - 2.3e-06 28.2 0.1 9.8e-06 26.2 0.1 2.1 1 1 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 gi|452211181|ref|YP_007491295.1| - 2.7e-05 23.7 0.3 6.6e-05 22.4 0.3 1.6 1 1 0 1 1 1 1 VWA domain containing CoxE-like protein VWA PF00092.28 gi|452211181|ref|YP_007491295.1| - 0.0043 17.3 0.5 0.0097 16.2 0.5 1.8 1 1 0 1 1 1 1 von Willebrand factor type A domain ERF PF04404.12 gi|452211181|ref|YP_007491295.1| - 0.054 13.4 0.1 0.14 12.0 0.1 1.7 1 0 0 1 1 1 0 ERF superfamily BatA PF07584.11 gi|452211182|ref|YP_007491296.1| - 5.1e-12 46.0 2.6 5.1e-12 46.0 2.6 2.2 2 0 0 2 2 2 1 Aerotolerance regulator N-terminal VWA_2 PF13519.6 gi|452211182|ref|YP_007491296.1| - 0.0065 17.1 0.2 0.024 15.3 0.1 2.0 2 1 0 2 2 2 1 von Willebrand factor type A domain CadC_C1 PF18500.1 gi|452211182|ref|YP_007491296.1| - 0.0087 16.2 0.0 0.021 15.0 0.0 1.6 1 0 0 1 1 1 1 CadC C-terminal domain 1 Marek_SORF3 PF07153.11 gi|452211182|ref|YP_007491296.1| - 0.015 14.7 0.0 0.027 13.8 0.0 1.3 1 0 0 1 1 1 0 Marek's disease-like virus SORF3 protein GATase1_like PF07090.11 gi|452211183|ref|YP_007491297.1| - 2.5e-10 40.2 0.0 0.0002 20.9 0.0 2.3 2 0 0 2 2 2 2 Putative glutamine amidotransferase VWA_2 PF13519.6 gi|452211183|ref|YP_007491297.1| - 7.4e-08 33.0 0.2 2.3e-07 31.4 0.2 1.9 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 gi|452211183|ref|YP_007491297.1| - 1.7e-06 28.4 0.3 0.00016 22.0 0.1 2.4 2 0 0 2 2 2 1 von Willebrand factor type A domain ThuA PF06283.11 gi|452211183|ref|YP_007491297.1| - 0.0012 19.2 0.0 0.0028 17.9 0.0 1.6 1 1 0 1 1 1 1 Trehalose utilisation Phage_holin_3_7 PF05449.11 gi|452211183|ref|YP_007491297.1| - 0.16 12.0 0.1 0.3 11.2 0.1 1.4 1 0 0 1 1 1 0 Putative 3TM holin, Phage_holin_3 DUF4131 PF13567.6 gi|452211183|ref|YP_007491297.1| - 0.35 10.5 1.4 1.7 8.3 0.5 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) AI-2E_transport PF01594.16 gi|452211185|ref|YP_007491299.1| - 2.3e-43 148.6 39.3 2.7e-43 148.4 39.3 1.0 1 0 0 1 1 1 1 AI-2E family transporter DUF4177 PF13783.6 gi|452211186|ref|YP_007491300.1| - 0.038 14.3 0.1 0.077 13.3 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4177) DUF3055 PF11256.8 gi|452211186|ref|YP_007491300.1| - 0.11 12.8 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3055) Serpin PF00079.20 gi|452211188|ref|YP_007491302.1| - 2.2e-114 382.6 3.0 2.5e-114 382.5 3.0 1.0 1 0 0 1 1 1 1 Serpin (serine protease inhibitor) DNA_gyraseB PF00204.25 gi|452211188|ref|YP_007491302.1| - 0.06 12.8 0.2 0.16 11.5 0.2 1.7 1 0 0 1 1 1 0 DNA gyrase B TRADD_N PF09034.10 gi|452211189|ref|YP_007491303.1| - 0.025 14.6 0.1 0.056 13.5 0.1 1.5 1 0 0 1 1 1 0 TRADD, N-terminal domain CsbD PF05532.12 gi|452211190|ref|YP_007491304.1| - 4.2e-14 52.2 13.7 5e-14 51.9 13.7 1.2 1 0 0 1 1 1 1 CsbD-like rve PF00665.26 gi|452211191|ref|YP_007491305.1| - 1.6e-10 41.2 0.0 3.6e-10 40.1 0.0 1.5 2 0 0 2 2 2 1 Integrase core domain HTH_7 PF02796.15 gi|452211191|ref|YP_007491305.1| - 6.5e-08 32.5 0.9 1.2e-06 28.4 0.1 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain of resolvase HTH_38 PF13936.6 gi|452211191|ref|YP_007491305.1| - 0.00025 20.7 0.1 0.00061 19.5 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 gi|452211191|ref|YP_007491305.1| - 0.00026 20.7 0.0 0.00054 19.7 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain HTH_29 PF13551.6 gi|452211191|ref|YP_007491305.1| - 0.00028 20.8 0.0 0.0008 19.4 0.0 1.8 1 1 0 1 1 1 1 Winged helix-turn helix HTH_IclR PF09339.10 gi|452211191|ref|YP_007491305.1| - 0.0013 18.5 0.0 0.0025 17.6 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain Terminase_5 PF06056.12 gi|452211191|ref|YP_007491305.1| - 0.0058 16.5 0.0 0.011 15.6 0.0 1.4 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) HTH_5 PF01022.20 gi|452211191|ref|YP_007491305.1| - 0.0066 16.3 0.0 1.7 8.6 0.0 2.5 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_3 PF01381.22 gi|452211191|ref|YP_007491305.1| - 0.018 15.1 0.1 0.03 14.4 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix MerR PF00376.23 gi|452211191|ref|YP_007491305.1| - 0.023 14.5 0.2 0.043 13.6 0.2 1.4 1 0 0 1 1 1 0 MerR family regulatory protein Sigma70_r4_2 PF08281.12 gi|452211191|ref|YP_007491305.1| - 0.028 14.1 0.0 0.057 13.1 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 MerR_1 PF13411.6 gi|452211191|ref|YP_007491305.1| - 0.039 14.0 0.0 0.076 13.1 0.0 1.4 1 0 0 1 1 1 0 MerR HTH family regulatory protein HTH_40 PF14493.6 gi|452211191|ref|YP_007491305.1| - 0.075 13.5 0.0 0.17 12.4 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain TnsD PF15978.5 gi|452211191|ref|YP_007491305.1| - 0.076 12.0 0.0 0.1 11.6 0.0 1.1 1 0 0 1 1 1 0 Tn7-like transposition protein D GcrA PF07750.11 gi|452211191|ref|YP_007491305.1| - 0.092 13.2 0.0 0.15 12.5 0.0 1.3 1 0 0 1 1 1 0 GcrA cell cycle regulator OxoDH_E1alpha_N PF12573.8 gi|452211191|ref|YP_007491305.1| - 0.16 11.7 0.1 0.34 10.7 0.1 1.4 1 0 0 1 1 1 0 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal HTH_24 PF13412.6 gi|452211191|ref|YP_007491305.1| - 0.16 11.5 0.0 0.3 10.7 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Phage_NinH PF06322.11 gi|452211191|ref|YP_007491305.1| - 0.19 11.6 0.1 0.48 10.4 0.0 1.7 2 0 0 2 2 1 0 Phage NinH protein RVT_1 PF00078.27 gi|452211193|ref|YP_007491307.1| - 8.8e-38 130.0 0.0 1.6e-37 129.2 0.0 1.4 1 0 0 1 1 1 1 Reverse transcriptase (RNA-dependent DNA polymerase) RVT_N PF13655.6 gi|452211193|ref|YP_007491307.1| - 3.3e-28 97.8 2.9 3.3e-28 97.8 2.9 1.8 2 0 0 2 2 2 1 N-terminal domain of reverse transcriptase GIIM PF08388.11 gi|452211193|ref|YP_007491307.1| - 4.1e-24 84.4 5.2 1.1e-23 83.0 5.2 1.8 1 0 0 1 1 1 1 Group II intron, maturase-specific domain IstB_IS21 PF01695.17 gi|452211194|ref|YP_007491308.1| - 2.5e-21 76.2 0.0 3.5e-21 75.7 0.0 1.2 1 0 0 1 1 1 1 IstB-like ATP binding protein RsgA_GTPase PF03193.16 gi|452211194|ref|YP_007491308.1| - 0.0069 16.3 0.0 0.011 15.7 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 gi|452211194|ref|YP_007491308.1| - 0.015 15.7 0.1 0.041 14.3 0.0 1.7 2 0 0 2 2 2 0 AAA ATPase domain PhoH PF02562.16 gi|452211194|ref|YP_007491308.1| - 0.031 13.7 0.0 0.049 13.1 0.0 1.3 1 0 0 1 1 1 0 PhoH-like protein AAA_5 PF07728.14 gi|452211194|ref|YP_007491308.1| - 0.054 13.5 0.2 0.11 12.6 0.2 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) ABC_tran PF00005.27 gi|452211194|ref|YP_007491308.1| - 0.11 13.0 0.0 0.37 11.3 0.0 1.8 2 0 0 2 2 2 0 ABC transporter RuvB_N PF05496.12 gi|452211194|ref|YP_007491308.1| - 0.12 12.1 0.0 0.19 11.5 0.0 1.3 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain HEPN-like_int PF18867.1 gi|452211194|ref|YP_007491308.1| - 0.14 12.1 0.0 0.25 11.2 0.0 1.5 1 0 0 1 1 1 0 HEPN-like integron domain AAA PF00004.29 gi|452211194|ref|YP_007491308.1| - 0.15 12.5 0.1 0.28 11.6 0.1 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 gi|452211194|ref|YP_007491308.1| - 0.16 12.5 0.1 0.43 11.1 0.1 1.8 2 0 0 2 2 2 0 AAA domain Mg_chelatase PF01078.21 gi|452211194|ref|YP_007491308.1| - 0.16 11.3 0.1 0.29 10.5 0.1 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI HTH_23 PF13384.6 gi|452211197|ref|YP_007491311.1| - 6.3e-05 22.7 0.0 0.0001 22.0 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain Terminase_5 PF06056.12 gi|452211197|ref|YP_007491311.1| - 0.00039 20.2 0.0 0.00052 19.9 0.0 1.2 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) HTH_38 PF13936.6 gi|452211197|ref|YP_007491311.1| - 0.0028 17.4 0.0 0.0079 15.9 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_28 PF13518.6 gi|452211197|ref|YP_007491311.1| - 0.012 15.7 0.0 0.016 15.3 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain Cas6 PF09559.10 gi|452211197|ref|YP_007491311.1| - 0.035 14.1 0.0 0.043 13.8 0.0 1.1 1 0 0 1 1 1 0 Cas6 Crispr Sigma70_r4_2 PF08281.12 gi|452211197|ref|YP_007491311.1| - 0.055 13.1 0.0 0.16 11.7 0.0 1.8 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_50 PF18024.1 gi|452211197|ref|YP_007491311.1| - 0.14 11.8 0.0 0.27 10.9 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HEPN-like_int PF18867.1 gi|452211198|ref|YP_007491312.1| - 0.073 12.9 0.0 0.1 12.5 0.0 1.2 1 0 0 1 1 1 0 HEPN-like integron domain IstB_IS21 PF01695.17 gi|452211199|ref|YP_007491313.1| - 8.5e-68 227.6 0.0 1.3e-67 226.9 0.0 1.3 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA PF00004.29 gi|452211199|ref|YP_007491313.1| - 3.8e-05 24.1 0.0 7.2e-05 23.2 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Bac_DnaA PF00308.18 gi|452211199|ref|YP_007491313.1| - 8.5e-05 22.5 0.0 0.00019 21.4 0.0 1.6 1 1 0 1 1 1 1 Bacterial dnaA protein RuvB_N PF05496.12 gi|452211199|ref|YP_007491313.1| - 0.00056 19.7 0.0 0.001 18.8 0.0 1.4 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain PhoH PF02562.16 gi|452211199|ref|YP_007491313.1| - 0.0017 17.8 0.0 0.0025 17.3 0.0 1.3 1 0 0 1 1 1 1 PhoH-like protein AAA_22 PF13401.6 gi|452211199|ref|YP_007491313.1| - 0.002 18.4 0.2 0.31 11.3 0.0 2.7 2 1 1 3 3 3 1 AAA domain AAA_16 PF13191.6 gi|452211199|ref|YP_007491313.1| - 0.0034 17.8 0.1 0.012 16.0 0.1 2.0 1 1 0 1 1 1 1 AAA ATPase domain AAA_18 PF13238.6 gi|452211199|ref|YP_007491313.1| - 0.004 17.7 1.4 0.031 14.8 0.2 2.8 2 1 0 2 2 2 1 AAA domain AAA_28 PF13521.6 gi|452211199|ref|YP_007491313.1| - 0.0042 17.4 0.1 0.014 15.7 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_14 PF13173.6 gi|452211199|ref|YP_007491313.1| - 0.0048 16.9 0.6 0.015 15.3 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_24 PF13479.6 gi|452211199|ref|YP_007491313.1| - 0.0058 16.4 0.5 0.03 14.0 0.2 2.3 2 1 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 gi|452211199|ref|YP_007491313.1| - 0.01 15.7 0.0 0.023 14.6 0.0 1.7 2 1 0 2 2 1 0 RsgA GTPase KTI12 PF08433.10 gi|452211199|ref|YP_007491313.1| - 0.023 14.2 0.0 0.14 11.6 0.0 2.1 2 0 0 2 2 2 0 Chromatin associated protein KTI12 AAA_5 PF07728.14 gi|452211199|ref|YP_007491313.1| - 0.024 14.6 0.2 0.11 12.5 0.2 2.2 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) RmuC PF02646.16 gi|452211199|ref|YP_007491313.1| - 0.039 13.1 0.1 0.19 10.8 0.0 2.0 2 0 0 2 2 2 0 RmuC family DUF815 PF05673.13 gi|452211199|ref|YP_007491313.1| - 0.041 13.0 0.0 0.056 12.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_30 PF13604.6 gi|452211199|ref|YP_007491313.1| - 0.049 13.4 0.0 0.2 11.3 0.0 1.9 1 1 0 1 1 1 0 AAA domain AAA_17 PF13207.6 gi|452211199|ref|YP_007491313.1| - 0.064 13.7 0.4 0.71 10.3 0.0 2.4 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.15 gi|452211199|ref|YP_007491313.1| - 0.067 13.1 0.5 13 5.6 0.1 2.5 1 1 1 2 2 2 0 NTPase AAA_25 PF13481.6 gi|452211199|ref|YP_007491313.1| - 0.074 12.6 0.0 0.21 11.1 0.0 1.8 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 gi|452211199|ref|YP_007491313.1| - 0.12 12.8 0.0 0.29 11.5 0.0 1.7 1 1 0 1 1 1 0 RNA helicase MeaB PF03308.16 gi|452211199|ref|YP_007491313.1| - 0.16 10.9 0.0 0.45 9.4 0.0 1.7 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Methylase_S PF01420.19 gi|452211201|ref|YP_007491315.1| - 8.7e-23 81.4 0.0 5.6e-18 65.7 0.0 2.1 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain NPV_P10 PF05531.12 gi|452211201|ref|YP_007491315.1| - 0.16 12.4 0.1 5.3 7.6 0.0 2.3 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein DUF501 PF04417.12 gi|452211201|ref|YP_007491315.1| - 1.1 9.0 4.0 5.8 6.7 0.4 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF501) N6_Mtase PF02384.16 gi|452211202|ref|YP_007491316.1| - 1.8e-65 221.3 0.0 2.4e-65 220.9 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.8 gi|452211202|ref|YP_007491316.1| - 7.6e-15 55.7 0.0 4.7e-13 49.9 0.0 2.6 1 1 0 1 1 1 1 HsdM N-terminal domain UPF0020 PF01170.18 gi|452211202|ref|YP_007491316.1| - 6.9e-08 32.4 0.0 1.5e-07 31.3 0.0 1.5 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 MTS PF05175.14 gi|452211202|ref|YP_007491316.1| - 0.0002 20.9 0.0 0.00085 18.9 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.6 gi|452211202|ref|YP_007491316.1| - 0.0012 18.6 0.0 0.016 15.0 0.0 2.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|452211202|ref|YP_007491316.1| - 0.028 14.3 0.0 0.25 11.2 0.0 2.3 1 1 0 1 1 1 0 Methyltransferase domain T4SS_TraI PF16932.5 gi|452211202|ref|YP_007491316.1| - 0.055 12.6 0.0 0.097 11.8 0.0 1.3 1 0 0 1 1 1 0 Type IV secretory system, conjugal DNA-protein transfer EcoEI_R_C PF08463.10 gi|452211203|ref|YP_007491317.1| - 1.5e-33 116.3 1.7 1.5e-33 116.3 1.7 1.9 2 0 0 2 2 2 1 EcoEI R protein C-terminal ResIII PF04851.15 gi|452211203|ref|YP_007491317.1| - 5.9e-33 114.3 0.1 2.9e-32 112.0 0.0 2.1 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit SWI2_SNF2 PF18766.1 gi|452211203|ref|YP_007491317.1| - 4.2e-15 56.0 0.8 2.4e-14 53.6 0.0 2.5 2 1 0 2 2 2 1 SWI2/SNF2 ATPase HSDR_N PF04313.14 gi|452211203|ref|YP_007491317.1| - 4.6e-12 46.3 0.0 4.4e-07 30.0 0.0 2.9 1 1 1 2 2 2 2 Type I restriction enzyme R protein N terminus (HSDR_N) DEAD PF00270.29 gi|452211203|ref|YP_007491317.1| - 1.6e-07 31.2 0.0 8.2e-07 29.0 0.0 2.2 1 1 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|452211203|ref|YP_007491317.1| - 1.5e-05 25.3 0.1 6.4e-05 23.3 0.1 2.2 1 0 0 1 1 1 1 Helicase conserved C-terminal domain UvrD-helicase PF00580.21 gi|452211203|ref|YP_007491317.1| - 0.00067 19.3 0.1 0.00067 19.3 0.1 2.5 2 1 0 2 2 2 1 UvrD/REP helicase N-terminal domain DUF853 PF05872.12 gi|452211203|ref|YP_007491317.1| - 0.018 13.6 0.1 0.037 12.6 0.1 1.4 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) AAA_19 PF13245.6 gi|452211203|ref|YP_007491317.1| - 0.022 15.1 0.0 0.051 13.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|452211203|ref|YP_007491317.1| - 0.071 12.8 0.0 0.15 11.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain CbiA PF01656.23 gi|452211203|ref|YP_007491317.1| - 0.093 12.8 0.0 1.6 8.8 0.0 2.7 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_11 PF13086.6 gi|452211203|ref|YP_007491317.1| - 1 9.1 0.0 1 9.1 0.0 2.6 4 0 0 4 4 4 0 AAA domain Phage_GP20 PF06810.11 gi|452211203|ref|YP_007491317.1| - 8 6.2 8.6 11 5.8 1.2 2.3 2 0 0 2 2 2 0 Phage minor structural protein GP20 Phasin PF05597.11 gi|452211205|ref|YP_007491319.1| - 9.1e-08 32.2 5.3 8.6e-06 25.8 5.3 2.0 1 1 0 1 1 1 1 Poly(hydroxyalcanoate) granule associated protein (phasin) GatB_Yqey PF02637.18 gi|452211205|ref|YP_007491319.1| - 0.014 15.2 0.8 0.018 14.9 0.8 1.2 1 0 0 1 1 1 0 GatB domain Lzipper-MIP1 PF14389.6 gi|452211205|ref|YP_007491319.1| - 0.016 15.5 1.3 0.03 14.6 1.3 1.4 1 0 0 1 1 1 0 Leucine-zipper of ternary complex factor MIP1 DUF883 PF05957.13 gi|452211205|ref|YP_007491319.1| - 0.02 15.5 1.9 0.02 15.5 1.9 1.7 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) TipAS PF07739.13 gi|452211205|ref|YP_007491319.1| - 0.041 14.4 1.6 1.8 9.1 0.1 2.0 1 1 1 2 2 2 0 TipAS antibiotic-recognition domain Seryl_tRNA_N PF02403.22 gi|452211205|ref|YP_007491319.1| - 0.054 13.7 5.6 0.069 13.4 5.6 1.2 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain PqqD PF05402.12 gi|452211205|ref|YP_007491319.1| - 0.062 13.6 0.6 0.1 12.9 0.1 1.6 2 1 0 2 2 2 0 Coenzyme PQQ synthesis protein D (PqqD) RRF PF01765.19 gi|452211205|ref|YP_007491319.1| - 0.062 13.3 4.6 0.081 12.9 4.6 1.2 1 0 0 1 1 1 0 Ribosome recycling factor BMFP PF04380.13 gi|452211205|ref|YP_007491319.1| - 0.13 12.7 8.3 0.27 11.8 6.0 2.3 2 1 0 2 2 2 0 Membrane fusogenic activity DUF2680 PF10925.8 gi|452211205|ref|YP_007491319.1| - 0.18 11.8 2.8 0.62 10.1 0.1 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF2680) YtxH PF12732.7 gi|452211205|ref|YP_007491319.1| - 0.32 11.6 5.5 0.28 11.7 3.5 1.8 1 1 1 2 2 2 0 YtxH-like protein LIF_OSM PF01291.17 gi|452211207|ref|YP_007491321.1| - 0.0054 16.9 1.5 1.8 8.7 0.0 3.1 1 1 2 4 4 4 1 LIF / OSM family Fusion_gly PF00523.18 gi|452211207|ref|YP_007491321.1| - 0.0073 14.6 0.9 0.0073 14.6 0.9 1.5 2 0 0 2 2 2 1 Fusion glycoprotein F0 DUF3391 PF11871.8 gi|452211207|ref|YP_007491321.1| - 0.029 14.9 12.0 0.34 11.4 0.9 2.8 2 2 1 3 3 3 0 Domain of unknown function (DUF3391) LIAS_N PF16881.5 gi|452211207|ref|YP_007491321.1| - 0.084 13.3 7.8 0.23 11.9 0.5 3.1 1 1 2 3 3 3 0 N-terminal domain of lipoyl synthase of Radical_SAM family Peptidase_S46 PF10459.9 gi|452211207|ref|YP_007491321.1| - 0.093 11.4 20.5 0.04 12.6 18.2 1.5 1 1 0 1 1 1 0 Peptidase S46 Laminin_II PF06009.12 gi|452211207|ref|YP_007491321.1| - 0.11 12.5 21.9 2.9 7.9 1.6 3.4 1 1 2 3 3 3 0 Laminin Domain II DUF948 PF06103.11 gi|452211207|ref|YP_007491321.1| - 0.26 11.6 7.9 8.3 6.7 0.6 3.3 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF948) ATP-synt_G PF04718.15 gi|452211207|ref|YP_007491321.1| - 0.85 10.5 3.7 1.6 9.6 0.5 2.4 2 1 0 2 2 2 0 Mitochondrial ATP synthase g subunit TMP_2 PF06791.13 gi|452211207|ref|YP_007491321.1| - 1.9 8.1 5.3 0.6 9.8 0.9 2.0 1 1 0 2 2 2 0 Prophage tail length tape measure protein Osmo_CC PF08946.10 gi|452211207|ref|YP_007491321.1| - 5.7 7.3 10.2 19 5.6 0.6 3.3 3 0 0 3 3 3 0 Osmosensory transporter coiled coil Cytochrom_B562 PF07361.11 gi|452211207|ref|YP_007491321.1| - 6.6 7.4 16.5 0.17 12.6 1.4 3.4 1 1 2 3 3 3 0 Cytochrome b562 DUF4200 PF13863.6 gi|452211207|ref|YP_007491321.1| - 7.3 7.0 33.6 0.083 13.3 12.5 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF4200) NPV_P10 PF05531.12 gi|452211207|ref|YP_007491321.1| - 9.9 6.7 12.0 8.6 6.9 0.4 4.1 2 2 2 4 4 4 0 Nucleopolyhedrovirus P10 protein DUF2353 PF09789.9 gi|452211211|ref|YP_007491325.1| - 0.031 13.7 17.2 0.092 12.1 7.9 2.2 2 0 0 2 2 2 0 Uncharacterized coiled-coil protein (DUF2353) Med28 PF11594.8 gi|452211211|ref|YP_007491325.1| - 0.87 9.7 6.3 0.53 10.4 0.4 2.9 1 1 1 2 2 2 0 Mediator complex subunit 28 TFIIE_beta PF02186.15 gi|452211211|ref|YP_007491325.1| - 2.3 8.6 5.5 1.1 9.6 0.4 3.0 3 1 1 4 4 4 0 TFIIE beta subunit core domain HTH_24 PF13412.6 gi|452211212|ref|YP_007491326.1| - 0.00063 19.3 0.4 0.0012 18.3 0.4 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|452211212|ref|YP_007491326.1| - 0.0019 18.1 0.1 0.0039 17.1 0.1 1.5 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 gi|452211212|ref|YP_007491326.1| - 0.0031 17.5 0.2 0.0067 16.4 0.2 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain TrmB PF01978.19 gi|452211212|ref|YP_007491326.1| - 0.0039 17.1 0.0 0.0087 15.9 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|452211212|ref|YP_007491326.1| - 0.0095 15.7 0.0 0.018 14.8 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|452211212|ref|YP_007491326.1| - 0.017 15.0 0.0 0.03 14.2 0.0 1.4 1 0 0 1 1 1 0 MarR family CarboxypepD_reg PF13620.6 gi|452211212|ref|YP_007491326.1| - 0.023 15.0 0.1 0.064 13.5 0.0 1.7 1 1 0 1 1 1 0 Carboxypeptidase regulatory-like domain Penicillinase_R PF03965.16 gi|452211212|ref|YP_007491326.1| - 0.026 14.9 0.0 0.058 13.8 0.0 1.5 1 0 0 1 1 1 0 Penicillinase repressor HTH_27 PF13463.6 gi|452211212|ref|YP_007491326.1| - 0.11 13.0 0.0 0.24 11.9 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain ETRAMP PF09716.10 gi|452211212|ref|YP_007491326.1| - 0.16 12.1 0.3 8.3 6.5 0.0 2.4 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) ACT PF01842.25 gi|452211213|ref|YP_007491327.1| - 0.0089 15.8 1.3 2.3 8.1 0.0 2.8 3 0 0 3 3 3 2 ACT domain Sigma70_r1_1 PF03979.14 gi|452211213|ref|YP_007491327.1| - 0.029 14.4 0.0 0.068 13.2 0.0 1.6 1 0 0 1 1 1 0 Sigma-70 factor, region 1.1 DUF2007 PF09413.10 gi|452211213|ref|YP_007491327.1| - 0.055 13.6 0.1 2.1 8.6 0.1 2.2 2 0 0 2 2 2 0 Putative prokaryotic signal transducing protein Homoserine_dh PF00742.19 gi|452211214|ref|YP_007491328.1| - 4.4e-56 189.5 0.1 7e-56 188.8 0.1 1.3 1 0 0 1 1 1 1 Homoserine dehydrogenase NAD_binding_3 PF03447.16 gi|452211214|ref|YP_007491328.1| - 1e-09 39.0 0.1 1.9e-09 38.2 0.1 1.4 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain ELFV_dehydrog PF00208.21 gi|452211214|ref|YP_007491328.1| - 9.3e-05 22.3 0.1 0.00019 21.3 0.1 1.6 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|452211214|ref|YP_007491328.1| - 0.0046 17.2 0.2 0.009 16.3 0.2 1.6 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain MMR_HSR1 PF01926.23 gi|452211215|ref|YP_007491329.1| - 7.6e-18 64.7 0.0 1e-17 64.2 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|452211215|ref|YP_007491329.1| - 3.4e-11 42.9 0.1 1.2e-09 37.9 0.1 2.1 1 1 0 1 1 1 1 Ferrous iron transport protein B Septin PF00735.18 gi|452211215|ref|YP_007491329.1| - 0.00025 20.4 0.0 0.00049 19.5 0.0 1.5 1 1 0 1 1 1 1 Septin RsgA_GTPase PF03193.16 gi|452211215|ref|YP_007491329.1| - 0.00045 20.2 0.4 0.04 13.8 0.2 2.7 2 1 0 2 2 2 1 RsgA GTPase GTP_EFTU PF00009.27 gi|452211215|ref|YP_007491329.1| - 0.0057 16.2 0.0 0.075 12.6 0.0 2.1 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain Dynamin_N PF00350.23 gi|452211215|ref|YP_007491329.1| - 0.0086 16.1 0.2 0.031 14.3 0.2 1.8 1 1 0 1 1 1 1 Dynamin family AAA_18 PF13238.6 gi|452211215|ref|YP_007491329.1| - 0.11 13.1 0.0 0.18 12.4 0.0 1.5 1 1 0 1 1 1 0 AAA domain Roc PF08477.13 gi|452211215|ref|YP_007491329.1| - 0.15 12.3 0.1 0.36 11.1 0.0 1.7 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase DHHA1 PF02272.19 gi|452211216|ref|YP_007491330.1| - 1e-16 61.6 0.1 3e-16 60.1 0.1 1.8 2 0 0 2 2 2 1 DHHA1 domain DHH PF01368.20 gi|452211216|ref|YP_007491330.1| - 7.1e-05 23.0 0.0 0.00012 22.2 0.0 1.4 1 0 0 1 1 1 1 DHH family DUF11 PF01345.18 gi|452211217|ref|YP_007491331.1| - 1.6e-21 76.4 8.7 2e-14 53.6 1.0 3.6 3 0 0 3 3 3 3 Domain of unknown function DUF11 BatD PF13584.6 gi|452211217|ref|YP_007491331.1| - 2.3e-11 43.2 5.6 9.7e-08 31.3 0.6 2.7 3 0 0 3 3 3 2 Oxygen tolerance CARDB PF07705.11 gi|452211217|ref|YP_007491331.1| - 8.3e-09 35.6 9.8 0.0066 16.7 0.1 3.5 3 0 0 3 3 3 3 CARDB bMG10 PF17973.1 gi|452211217|ref|YP_007491331.1| - 9.1e-07 29.1 5.7 2.5 8.3 0.2 5.4 3 2 2 5 5 5 2 Bacterial Alpha-2-macroglobulin MG10 domain TRAP_beta PF05753.14 gi|452211217|ref|YP_007491331.1| - 4.1e-06 26.3 7.5 0.019 14.4 0.2 3.2 2 1 1 3 3 3 2 Translocon-associated protein beta (TRAPB) DUF2393 PF09624.10 gi|452211217|ref|YP_007491331.1| - 0.0013 18.8 5.7 0.23 11.4 0.1 3.3 3 0 0 3 3 3 2 Protein of unknown function (DUF2393) DUF1616 PF07760.11 gi|452211217|ref|YP_007491331.1| - 0.0063 15.9 4.3 0.19 11.1 0.5 2.5 2 1 1 3 3 3 2 Protein of unknown function (DUF1616) Top6b_C PF18000.1 gi|452211217|ref|YP_007491331.1| - 0.01 16.0 8.6 0.033 14.4 0.3 4.6 4 1 0 4 4 4 0 Type 2 DNA topoisomerase 6 subunit B C-terminal domain PGF-CTERM PF18204.1 gi|452211217|ref|YP_007491331.1| - 0.039 13.9 0.8 0.067 13.2 0.8 1.4 1 0 0 1 1 1 0 PGF-CTERM motif NPCBM_assoc PF10633.9 gi|452211217|ref|YP_007491331.1| - 0.29 11.4 4.2 16 5.8 0.1 3.6 3 1 0 3 3 3 0 NPCBM-associated, NEW3 domain of alpha-galactosidase Glyco_hydro_2 PF00703.21 gi|452211217|ref|YP_007491331.1| - 0.63 10.7 8.1 1.6 9.4 0.3 3.5 2 1 1 3 3 3 0 Glycosyl hydrolases family 2 fn3_5 PF06280.12 gi|452211217|ref|YP_007491331.1| - 6 7.6 9.5 0.63 10.7 3.4 2.5 2 2 1 3 3 3 0 Fn3-like domain NIF3 PF01784.18 gi|452211220|ref|YP_007491334.1| - 1.5e-53 182.0 0.1 1.9e-53 181.6 0.1 1.1 1 0 0 1 1 1 1 NIF3 (NGG1p interacting factor 3) TPR_1 PF00515.28 gi|452211222|ref|YP_007491336.1| - 4.2e-167 536.0 75.2 6e-10 38.5 0.9 25.0 25 0 0 25 25 25 23 Tetratricopeptide repeat TPR_2 PF07719.17 gi|452211222|ref|YP_007491336.1| - 1.9e-144 458.5 66.5 2.2e-07 30.5 0.0 25.0 25 0 0 25 25 25 23 Tetratricopeptide repeat TPR_8 PF13181.6 gi|452211222|ref|YP_007491336.1| - 1.5e-123 393.0 82.8 3.7e-09 36.1 0.1 24.3 24 0 0 24 24 24 21 Tetratricopeptide repeat TPR_11 PF13414.6 gi|452211222|ref|YP_007491336.1| - 3.9e-115 375.3 79.0 1.6e-08 34.1 0.3 23.2 11 7 13 24 24 24 21 TPR repeat TPR_16 PF13432.6 gi|452211222|ref|YP_007491336.1| - 1.1e-95 314.0 5.0 2.8e-08 34.3 0.3 15.6 9 4 7 16 16 16 15 Tetratricopeptide repeat TPR_17 PF13431.6 gi|452211222|ref|YP_007491336.1| - 4.3e-83 267.9 64.1 2.2e-05 24.5 0.0 25.3 24 1 1 25 25 25 16 Tetratricopeptide repeat TPR_14 PF13428.6 gi|452211222|ref|YP_007491336.1| - 1.6e-80 258.8 19.5 5.7e-05 23.6 0.0 21.8 7 6 15 22 22 21 18 Tetratricopeptide repeat TPR_9 PF13371.6 gi|452211222|ref|YP_007491336.1| - 3.7e-76 251.3 6.8 3.1e-07 30.4 0.0 13.5 6 2 7 15 15 15 13 Tetratricopeptide repeat TPR_12 PF13424.6 gi|452211222|ref|YP_007491336.1| - 5.2e-63 209.3 56.0 1.6e-08 34.7 0.2 18.0 5 3 15 20 20 20 19 Tetratricopeptide repeat TPR_19 PF14559.6 gi|452211222|ref|YP_007491336.1| - 8.6e-56 186.3 37.5 6.1e-08 33.1 1.1 15.6 5 4 11 19 19 19 14 Tetratricopeptide repeat TPR_7 PF13176.6 gi|452211222|ref|YP_007491336.1| - 1.3e-52 172.0 46.1 0.018 15.0 0.2 21.9 20 2 2 22 22 22 14 Tetratricopeptide repeat TPR_6 PF13174.6 gi|452211222|ref|YP_007491336.1| - 1.2e-37 126.1 42.5 0.011 16.3 0.1 22.1 23 0 0 23 23 22 6 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|452211222|ref|YP_007491336.1| - 3.4e-36 123.3 48.2 2.4e-06 27.7 0.7 10.9 6 2 5 11 11 11 8 Anaphase-promoting complex, cyclosome, subunit 3 NARP1 PF12569.8 gi|452211222|ref|YP_007491336.1| - 3.8e-25 88.8 19.7 0.00049 19.2 0.0 10.3 3 3 6 11 11 11 9 NMDA receptor-regulated protein 1 Fis1_TPR_C PF14853.6 gi|452211222|ref|YP_007491336.1| - 3.5e-22 78.2 41.2 0.026 14.6 0.0 17.5 17 3 2 19 19 18 5 Fis1 C-terminal tetratricopeptide repeat DUF3856 PF12968.7 gi|452211222|ref|YP_007491336.1| - 1.9e-17 63.7 18.4 0.19 11.8 0.2 13.9 7 4 4 13 13 13 3 Domain of Unknown Function (DUF3856) TPR_10 PF13374.6 gi|452211222|ref|YP_007491336.1| - 3.1e-17 61.9 39.3 0.43 10.5 0.1 19.5 22 0 0 22 22 20 1 Tetratricopeptide repeat MIT PF04212.18 gi|452211222|ref|YP_007491336.1| - 2.7e-15 56.2 69.3 0.061 13.4 0.0 19.5 21 1 1 22 22 22 4 MIT (microtubule interacting and transport) domain BTAD PF03704.17 gi|452211222|ref|YP_007491336.1| - 4.3e-12 46.7 24.8 0.0019 18.6 0.3 10.2 3 2 6 10 10 10 3 Bacterial transcriptional activator domain TPR_15 PF13429.6 gi|452211222|ref|YP_007491336.1| - 9.8e-12 44.7 20.4 1.1e-05 24.8 1.3 8.6 3 3 9 12 12 12 5 Tetratricopeptide repeat TPR_5 PF12688.7 gi|452211222|ref|YP_007491336.1| - 5.4e-10 39.5 10.6 1.2e-06 28.7 0.1 8.3 7 2 0 8 8 8 1 Tetratrico peptide repeat SRP_TPR_like PF17004.5 gi|452211222|ref|YP_007491336.1| - 2.2e-06 27.7 27.7 0.17 11.9 1.2 9.5 5 4 2 7 7 7 2 Putative TPR-like repeat FAT PF02259.23 gi|452211222|ref|YP_007491336.1| - 7.7e-06 25.3 20.1 0.24 10.6 0.1 7.8 4 4 2 6 6 6 2 FAT domain Alkyl_sulf_dimr PF14863.6 gi|452211222|ref|YP_007491336.1| - 1.5e-05 25.5 12.2 4.1 7.8 0.0 8.4 5 3 4 9 9 8 1 Alkyl sulfatase dimerisation NRBF2_MIT PF17169.4 gi|452211222|ref|YP_007491336.1| - 1.5e-05 25.1 18.4 25 5.2 0.1 12.2 11 4 4 15 15 13 0 MIT domain of nuclear receptor-binding factor 2 ChAPs PF09295.10 gi|452211222|ref|YP_007491336.1| - 5.6e-05 22.3 6.4 0.051 12.6 0.1 5.3 4 2 2 6 6 6 1 ChAPs (Chs5p-Arf1p-binding proteins) TPR_3 PF07720.12 gi|452211222|ref|YP_007491336.1| - 0.0018 18.2 34.3 13 5.9 0.0 13.1 15 0 0 15 15 14 0 Tetratricopeptide repeat PPR PF01535.20 gi|452211222|ref|YP_007491336.1| - 0.014 15.6 21.9 21 5.7 0.1 11.9 16 0 0 16 16 11 0 PPR repeat Rapsyn_N PF10579.9 gi|452211222|ref|YP_007491336.1| - 0.027 14.6 2.8 3.3 7.9 0.1 5.3 7 1 1 8 8 5 0 Rapsyn N-terminal myristoylation and linker region RPN6_N PF18055.1 gi|452211222|ref|YP_007491336.1| - 0.041 14.2 2.8 25 5.3 0.0 4.9 4 1 1 5 5 4 0 26S proteasome regulatory subunit RPN6 N-terminal domain Coatomer_E PF04733.14 gi|452211222|ref|YP_007491336.1| - 0.051 13.0 11.2 1.6 8.1 0.1 5.1 3 2 2 6 6 6 0 Coatomer epsilon subunit DUF627 PF04781.12 gi|452211222|ref|YP_007491336.1| - 0.21 11.6 8.6 4.1 7.5 0.1 6.2 7 1 3 10 10 7 0 Protein of unknown function (DUF627) TPR_4 PF07721.14 gi|452211222|ref|YP_007491336.1| - 0.48 11.2 22.6 3 8.7 1.3 8.2 10 0 0 10 10 7 0 Tetratricopeptide repeat dCMP_cyt_deam_1 PF00383.23 gi|452211224|ref|YP_007491338.1| - 3.6e-25 87.8 0.0 4.6e-25 87.4 0.0 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 gi|452211224|ref|YP_007491338.1| - 6.1e-22 77.9 0.0 6.6e-22 77.7 0.0 1.1 1 0 0 1 1 1 1 MafB19-like deaminase APOBEC3 PF18771.1 gi|452211224|ref|YP_007491338.1| - 0.0077 16.4 0.0 0.012 15.8 0.0 1.2 1 0 0 1 1 1 1 APOBEC3 SNAD4 PF18750.1 gi|452211224|ref|YP_007491338.1| - 0.013 15.6 0.0 0.021 15.0 0.0 1.2 1 0 0 1 1 1 0 Secreted Novel AID/APOBEC-like Deaminase 4 DUF3663 PF12404.8 gi|452211224|ref|YP_007491338.1| - 0.069 13.2 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 Peptidase APOBEC2 PF18772.1 gi|452211224|ref|YP_007491338.1| - 0.087 12.9 0.0 0.16 12.0 0.0 1.4 1 0 0 1 1 1 0 APOBEC2 PPDK_N PF01326.19 gi|452211226|ref|YP_007491340.1| - 1.6e-114 382.6 0.0 2.3e-114 382.1 0.0 1.2 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 gi|452211226|ref|YP_007491340.1| - 2.2e-60 204.3 0.1 3.6e-60 203.6 0.1 1.3 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 gi|452211226|ref|YP_007491340.1| - 1.7e-25 88.5 0.4 5.1e-25 87.0 0.4 1.9 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain zf-FPG_IleRS PF06827.14 gi|452211227|ref|YP_007491341.1| - 8.2e-06 25.6 1.9 1.1e-05 25.1 1.9 1.2 1 0 0 1 1 1 1 Zinc finger found in FPG and IleRS zf-TFIIB PF13453.6 gi|452211227|ref|YP_007491341.1| - 0.0031 16.8 0.9 0.0045 16.3 0.9 1.2 1 0 0 1 1 1 1 Transcription factor zinc-finger DUF2688 PF10892.8 gi|452211227|ref|YP_007491341.1| - 0.011 15.2 6.5 0.38 10.3 0.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2688) zinc_ribbon_2 PF13240.6 gi|452211227|ref|YP_007491341.1| - 0.017 14.9 5.3 0.91 9.3 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain DZR PF12773.7 gi|452211227|ref|YP_007491341.1| - 0.03 14.3 4.1 0.2 11.7 4.2 1.9 1 1 0 1 1 1 0 Double zinc ribbon Nudix_N_2 PF14803.6 gi|452211227|ref|YP_007491341.1| - 0.038 13.9 5.4 1.3 9.0 0.2 2.1 2 0 0 2 2 2 0 Nudix N-terminal C1_2 PF03107.16 gi|452211227|ref|YP_007491341.1| - 0.038 14.3 2.2 0.054 13.8 2.2 1.2 1 0 0 1 1 1 0 C1 domain Zn-ribbon_8 PF09723.10 gi|452211227|ref|YP_007491341.1| - 0.08 13.1 2.9 2.7 8.2 0.1 2.2 2 0 0 2 2 2 0 Zinc ribbon domain zf-ACC PF17848.1 gi|452211227|ref|YP_007491341.1| - 0.2 11.7 5.6 0.55 10.4 4.6 2.0 1 1 0 1 1 1 0 Acetyl-coA carboxylase zinc finger domain zf_C2H2_13 PF18508.1 gi|452211227|ref|YP_007491341.1| - 0.26 10.9 4.8 2.5 7.7 0.1 2.1 1 1 1 2 2 2 0 Zinc finger domain zf_UBZ PF18439.1 gi|452211227|ref|YP_007491341.1| - 0.84 9.3 3.9 10 5.8 0.3 2.2 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger Y1_Tnp PF01797.16 gi|452211228|ref|YP_007491342.1| - 1.1e-18 67.5 0.0 1.3e-18 67.2 0.0 1.0 1 0 0 1 1 1 1 Transposase IS200 like Lipid_DES PF08557.10 gi|452211228|ref|YP_007491342.1| - 0.036 13.6 0.0 0.078 12.5 0.0 1.5 1 0 0 1 1 1 0 Sphingolipid Delta4-desaturase (DES) DUF2116 PF09889.9 gi|452211229|ref|YP_007491343.1| - 0.001 19.0 2.2 0.0013 18.7 2.2 1.2 1 0 0 1 1 1 1 Uncharacterized protein containing a Zn-ribbon (DUF2116) C1_1 PF00130.22 gi|452211229|ref|YP_007491343.1| - 0.005 16.7 0.8 0.0062 16.4 0.8 1.2 1 0 0 1 1 1 1 Phorbol esters/diacylglycerol binding domain (C1 domain) DUF2256 PF10013.9 gi|452211229|ref|YP_007491343.1| - 0.012 15.7 8.1 0.41 10.8 8.1 2.2 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2256) HscB_4_cys PF18256.1 gi|452211229|ref|YP_007491343.1| - 0.015 15.1 1.7 0.025 14.4 1.7 1.3 1 0 0 1 1 1 0 Co-chaperone HscB tetracysteine metal binding motif NinG PF05766.12 gi|452211229|ref|YP_007491343.1| - 0.018 15.0 1.0 0.018 15.0 1.0 1.0 1 0 0 1 1 1 0 Bacteriophage Lambda NinG protein Ecl1 PF12855.7 gi|452211229|ref|YP_007491343.1| - 0.039 15.1 3.8 0.044 15.0 3.8 1.0 1 0 0 1 1 1 0 ECL1/2/3 zinc binding proteins zf-MYND PF01753.18 gi|452211229|ref|YP_007491343.1| - 0.051 13.7 4.6 0.087 12.9 4.6 1.4 1 1 0 1 1 1 0 MYND finger zf-FLZ PF04570.14 gi|452211229|ref|YP_007491343.1| - 0.056 12.9 5.5 0.4 10.2 5.5 1.9 1 1 0 1 1 1 0 zinc-finger of the FCS-type, C2-C2 Peptidase_C39_2 PF13529.6 gi|452211230|ref|YP_007491344.1| - 2e-07 31.7 0.6 2e-07 31.7 0.6 2.8 2 2 1 3 3 3 1 Peptidase_C39 like family Peptidase_C70 PF12385.8 gi|452211230|ref|YP_007491344.1| - 0.038 14.0 0.0 0.1 12.6 0.0 1.7 1 0 0 1 1 1 0 Papain-like cysteine protease AvrRpt2 DNA_pol_lambd_f PF10391.9 gi|452211230|ref|YP_007491344.1| - 0.14 12.0 0.0 0.4 10.6 0.0 1.8 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda Lactonase PF10282.9 gi|452211231|ref|YP_007491345.1| - 5.1e-16 58.9 5.3 2.7e-06 26.9 0.1 3.9 1 1 3 4 4 4 4 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.16 gi|452211231|ref|YP_007491345.1| - 6.1e-16 57.9 11.4 1.2e-06 27.4 0.3 3.8 2 2 2 4 4 4 4 Cytochrome D1 heme domain SGL PF08450.12 gi|452211231|ref|YP_007491345.1| - 2.5e-12 46.9 9.6 0.00034 20.3 0.7 4.1 1 1 3 4 4 4 4 SMP-30/Gluconolactonase/LRE-like region NHL PF01436.21 gi|452211231|ref|YP_007491345.1| - 5.7e-10 38.7 7.6 0.017 15.1 0.3 5.5 4 1 1 5 5 5 3 NHL repeat PD40 PF07676.12 gi|452211231|ref|YP_007491345.1| - 6.1e-10 38.8 0.1 0.83 9.7 0.0 6.0 6 0 0 6 6 6 1 WD40-like Beta Propeller Repeat Str_synth PF03088.16 gi|452211231|ref|YP_007491345.1| - 6e-08 32.7 0.3 4.3 7.5 0.0 5.0 2 1 3 5 5 5 2 Strictosidine synthase Arylesterase PF01731.20 gi|452211231|ref|YP_007491345.1| - 2.2e-06 27.8 11.3 0.52 10.5 0.1 5.4 3 2 2 5 5 5 2 Arylesterase DPPIV_N PF00930.21 gi|452211231|ref|YP_007491345.1| - 0.00011 21.0 0.2 0.006 15.4 0.2 2.8 3 0 0 3 3 3 1 Dipeptidyl peptidase IV (DPP IV) N-terminal region ANAPC4_WD40 PF12894.7 gi|452211231|ref|YP_007491345.1| - 0.00059 20.1 4.0 5.7 7.3 0.0 4.6 2 2 2 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain DUF1513 PF07433.11 gi|452211231|ref|YP_007491345.1| - 0.00068 18.8 1.2 0.084 11.9 0.2 3.5 2 1 2 4 4 4 1 Protein of unknown function (DUF1513) SBP56 PF05694.11 gi|452211231|ref|YP_007491345.1| - 0.00083 18.3 0.3 7.6 5.2 0.0 4.3 1 1 2 4 4 4 1 56kDa selenium binding protein (SBP56) Arm-DNA-bind_3 PF13356.6 gi|452211231|ref|YP_007491345.1| - 0.0017 18.7 0.0 22 5.5 0.0 4.7 1 1 2 3 3 3 0 Arm DNA-binding domain Me-amine-dh_H PF06433.11 gi|452211231|ref|YP_007491345.1| - 0.0018 17.2 14.3 0.068 12.0 2.7 3.7 1 1 3 4 4 4 4 Methylamine dehydrogenase heavy chain (MADH) P_proprotein PF01483.20 gi|452211231|ref|YP_007491345.1| - 0.0024 17.9 0.1 11 6.1 0.0 4.7 4 1 1 5 5 5 0 Proprotein convertase P-domain MMPL PF03176.15 gi|452211231|ref|YP_007491345.1| - 0.0041 16.1 5.8 0.011 14.6 1.0 2.7 1 1 2 3 3 3 1 MMPL family DUF839 PF05787.13 gi|452211231|ref|YP_007491345.1| - 0.0061 15.8 5.2 0.077 12.1 5.2 2.7 1 1 0 1 1 1 1 Bacterial protein of unknown function (DUF839) Imm75 PF15660.6 gi|452211231|ref|YP_007491345.1| - 0.5 10.7 3.7 36 4.7 0.1 4.2 2 2 3 5 5 5 0 Putative Immunity protein 75 PBCV_basic_adap PF08789.10 gi|452211231|ref|YP_007491345.1| - 0.63 10.2 8.6 70 3.7 0.1 4.6 5 0 0 5 5 5 0 PBCV-specific basic adaptor domain Pectinesterase PF01095.19 gi|452211231|ref|YP_007491345.1| - 8.8 4.9 14.9 0.012 14.3 2.6 2.4 3 0 0 3 3 3 0 Pectinesterase AlbA_2 PF04326.14 gi|452211233|ref|YP_007491347.1| - 1.4e-20 73.8 0.0 2.4e-20 73.1 0.0 1.4 1 0 0 1 1 1 1 Putative DNA-binding domain MarC PF01914.17 gi|452211234|ref|YP_007491348.1| - 9e-56 188.5 17.7 1e-55 188.3 17.7 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein TerC PF03741.16 gi|452211234|ref|YP_007491348.1| - 1.7e-06 27.9 13.0 4.1e-06 26.6 13.0 1.7 1 1 0 1 1 1 1 Integral membrane protein TerC family LysE PF01810.18 gi|452211234|ref|YP_007491348.1| - 0.00038 20.0 11.4 0.0033 16.9 11.4 2.0 1 1 0 1 1 1 1 LysE type translocator CobD_Cbib PF03186.13 gi|452211234|ref|YP_007491348.1| - 0.05 12.8 0.3 0.05 12.8 0.3 2.1 2 0 0 2 2 2 0 CobD/Cbib protein COX2_TM PF02790.15 gi|452211234|ref|YP_007491348.1| - 0.31 11.2 8.1 0.44 10.7 1.1 3.1 3 0 0 3 3 3 0 Cytochrome C oxidase subunit II, transmembrane domain DUF805 PF05656.14 gi|452211234|ref|YP_007491348.1| - 5.1 7.6 11.3 0.43 11.0 2.3 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF805) Crust_neurohorm PF01147.17 gi|452211235|ref|YP_007491349.1| - 0.16 11.8 1.6 6.1 6.7 0.1 2.5 2 0 0 2 2 2 0 Crustacean CHH/MIH/GIH neurohormone family FTO_CTD PF12934.7 gi|452211237|ref|YP_007491351.1| - 0.097 12.4 1.3 0.13 12.0 1.0 1.6 1 1 0 1 1 1 0 FTO C-terminal domain Pox_G5 PF04599.12 gi|452211240|ref|YP_007491354.1| - 0.028 13.4 0.1 0.028 13.4 0.1 1.0 1 0 0 1 1 1 0 Poxvirus G5 protein MatE PF01554.18 gi|452211240|ref|YP_007491354.1| - 0.13 11.9 0.0 0.13 11.9 0.0 1.0 1 0 0 1 1 1 0 MatE N6_Mtase PF02384.16 gi|452211242|ref|YP_007491356.1| - 2.2e-15 56.7 0.0 2.6e-12 46.6 0.0 2.1 1 1 1 2 2 2 2 N-6 DNA Methylase NUDIX PF00293.28 gi|452211245|ref|YP_007491359.1| - 0.015 15.4 0.0 0.015 15.4 0.0 1.1 1 0 0 1 1 1 0 NUDIX domain TRL PF13146.6 gi|452211245|ref|YP_007491359.1| - 0.026 14.8 0.0 0.027 14.7 0.0 1.2 1 0 0 1 1 1 0 TRL-like protein family PocR PF10114.9 gi|452211248|ref|YP_007491362.1| - 5.3e-48 162.9 0.3 1.4e-47 161.5 0.0 1.9 2 0 0 2 2 2 1 Sensory domain found in PocR PAS PF00989.25 gi|452211248|ref|YP_007491362.1| - 1.7e-31 108.5 0.0 7.6e-15 54.9 0.0 4.7 4 0 0 4 4 4 4 PAS fold HisKA_2 PF07568.12 gi|452211248|ref|YP_007491362.1| - 6.8e-30 103.0 0.6 6.8e-30 103.0 0.6 3.1 3 0 0 3 3 3 1 Histidine kinase PAS_9 PF13426.7 gi|452211248|ref|YP_007491362.1| - 4.3e-28 97.6 0.0 1.5e-14 54.1 0.0 5.4 5 0 0 5 5 5 3 PAS domain PAS_4 PF08448.10 gi|452211248|ref|YP_007491362.1| - 8.5e-25 87.2 0.0 3.4e-09 36.9 0.0 5.0 4 1 0 4 4 4 4 PAS fold PAS_3 PF08447.12 gi|452211248|ref|YP_007491362.1| - 2.2e-15 56.7 0.0 1.7e-06 28.2 0.0 4.1 4 0 0 4 4 4 3 PAS fold PAS_8 PF13188.7 gi|452211248|ref|YP_007491362.1| - 5.7e-12 45.4 0.0 9.8e-05 22.3 0.0 3.8 4 0 0 4 4 4 2 PAS domain HATPase_c PF02518.26 gi|452211248|ref|YP_007491362.1| - 1.5e-07 31.9 0.1 5.3e-07 30.1 0.1 1.9 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_10 PF13596.6 gi|452211248|ref|YP_007491362.1| - 5.1e-07 30.2 0.0 0.0031 18.1 0.0 3.1 2 0 0 2 2 2 2 PAS domain PAS_7 PF12860.7 gi|452211248|ref|YP_007491362.1| - 4.9e-05 23.5 0.3 3.1 8.0 0.0 5.6 5 2 0 5 5 5 1 PAS fold HWE_HK PF07536.14 gi|452211248|ref|YP_007491362.1| - 0.0039 17.9 0.5 0.021 15.5 0.0 2.5 2 0 0 2 2 2 1 HWE histidine kinase MEKHLA PF08670.11 gi|452211248|ref|YP_007491362.1| - 0.045 13.6 0.0 0.13 12.2 0.0 1.8 1 0 0 1 1 1 0 MEKHLA domain HATPase_c_2 PF13581.6 gi|452211248|ref|YP_007491362.1| - 0.079 12.9 0.0 0.2 11.6 0.0 1.7 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain Peptidase_M20 PF01546.28 gi|452211249|ref|YP_007491363.1| - 1.5e-14 54.2 0.0 2.3e-14 53.6 0.0 1.4 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|452211249|ref|YP_007491363.1| - 0.00034 20.5 0.0 0.0007 19.5 0.0 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M42 PF05343.14 gi|452211249|ref|YP_007491363.1| - 0.015 14.4 0.0 0.74 8.8 0.0 3.3 3 1 1 4 4 4 0 M42 glutamyl aminopeptidase DNA_photolyase PF00875.18 gi|452211249|ref|YP_007491363.1| - 0.13 12.2 0.0 0.25 11.3 0.0 1.3 1 0 0 1 1 1 0 DNA photolyase Peptidase_M28 PF04389.17 gi|452211249|ref|YP_007491363.1| - 0.2 11.3 0.0 0.75 9.5 0.0 1.8 2 0 0 2 2 2 0 Peptidase family M28 UPF0114 PF03350.16 gi|452211250|ref|YP_007491364.1| - 4e-24 85.1 5.0 6.3e-24 84.4 5.0 1.3 1 0 0 1 1 1 1 Uncharacterized protein family, UPF0114 DsbD PF02683.15 gi|452211250|ref|YP_007491364.1| - 0.0012 18.8 3.9 0.93 9.3 2.7 2.4 1 1 1 2 2 2 2 Cytochrome C biogenesis protein transmembrane region DUF1269 PF06897.12 gi|452211251|ref|YP_007491365.1| - 1.4e-35 121.5 0.3 2.1e-35 121.0 0.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1269) Gly-zipper_YMGG PF13441.6 gi|452211251|ref|YP_007491365.1| - 0.00014 21.5 3.1 0.00028 20.5 3.1 1.4 1 0 0 1 1 1 1 YMGG-like Gly-zipper Gly-zipper_Omp PF13488.6 gi|452211251|ref|YP_007491365.1| - 0.0016 18.4 2.5 0.0026 17.7 2.5 1.3 1 0 0 1 1 1 1 Glycine zipper DUF456 PF04306.13 gi|452211251|ref|YP_007491365.1| - 0.012 15.9 2.6 0.015 15.5 2.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF456) OSR1_C PF12202.8 gi|452211251|ref|YP_007491365.1| - 0.015 15.5 0.1 0.045 14.0 0.0 1.8 2 0 0 2 2 2 0 Oxidative-stress-responsive kinase 1 C-terminal domain Romo1 PF10247.9 gi|452211251|ref|YP_007491365.1| - 0.35 11.3 5.0 0.48 10.8 0.1 2.3 2 0 0 2 2 2 0 Reactive mitochondrial oxygen species modulator 1 Gly-zipper_OmpA PF13436.6 gi|452211251|ref|YP_007491365.1| - 0.37 10.6 6.7 1.1 9.1 6.7 1.8 1 1 0 1 1 1 0 Glycine-zipper domain Bacteriocin_IIc PF10439.9 gi|452211251|ref|YP_007491365.1| - 0.56 10.4 6.3 0.94 9.6 6.3 1.3 1 0 0 1 1 1 0 Bacteriocin class II with double-glycine leader peptide AI-2E_transport PF01594.16 gi|452211253|ref|YP_007491367.1| - 2.3e-44 151.9 36.6 2.7e-44 151.7 36.6 1.0 1 0 0 1 1 1 1 AI-2E family transporter LOR PF04525.12 gi|452211254|ref|YP_007491368.1| - 9.9e-09 35.0 0.0 1.1e-08 35.0 0.0 1.0 1 0 0 1 1 1 1 LURP-one-related Fe-ADH PF00465.19 gi|452211255|ref|YP_007491369.1| - 1.1e-130 435.8 3.6 1.2e-130 435.6 3.6 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 gi|452211255|ref|YP_007491369.1| - 3.2e-18 66.4 2.6 7.2e-10 39.0 0.0 2.2 1 1 1 2 2 2 2 Iron-containing alcohol dehydrogenase LAGLIDADG_3 PF14528.6 gi|452211255|ref|YP_007491369.1| - 0.013 15.8 0.0 0.47 10.8 0.0 2.3 2 0 0 2 2 2 0 LAGLIDADG-like domain Peripla_BP_6 PF13458.6 gi|452211255|ref|YP_007491369.1| - 0.015 15.0 0.2 0.081 12.6 0.0 2.0 2 0 0 2 2 2 0 Periplasmic binding protein DUF1508 PF07411.12 gi|452211255|ref|YP_007491369.1| - 0.035 14.0 0.2 4.9 7.1 0.1 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF1508) TetR_C_25 PF17933.1 gi|452211255|ref|YP_007491369.1| - 0.051 13.9 0.1 0.33 11.3 0.0 2.2 1 1 1 2 2 2 0 Tetracyclin repressor-like, C-terminal domain PGM_PMM_II PF02879.16 gi|452211255|ref|YP_007491369.1| - 0.083 13.5 0.0 19 6.0 0.0 2.5 2 0 0 2 2 2 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DUF1882 PF08966.11 gi|452211256|ref|YP_007491370.1| - 0.076 13.3 0.1 0.076 13.3 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1882) GDE_C PF06202.14 gi|452211257|ref|YP_007491371.1| - 7.1e-136 453.1 0.0 1.8e-135 451.8 0.0 1.6 2 0 0 2 2 2 1 Amylo-alpha-1,6-glucosidase GDE_N PF12439.8 gi|452211257|ref|YP_007491371.1| - 9.7e-63 211.5 0.0 1.4e-62 211.0 0.0 1.2 1 0 0 1 1 1 1 Glycogen debranching enzyme N terminal Glyco_hydro_100 PF12899.7 gi|452211257|ref|YP_007491371.1| - 0.0013 17.5 1.0 0.11 11.1 0.0 2.4 2 1 0 2 2 2 2 Alkaline and neutral invertase DUF608 PF04685.13 gi|452211257|ref|YP_007491371.1| - 0.0057 15.9 0.3 0.0092 15.2 0.3 1.2 1 0 0 1 1 1 1 Glycosyl-hydrolase family 116, catalytic region Bac_rhamnosid6H PF17389.2 gi|452211257|ref|YP_007491371.1| - 0.024 13.9 0.0 0.034 13.4 0.0 1.2 1 0 0 1 1 1 0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain Glyco_hydro_130 PF04041.13 gi|452211258|ref|YP_007491372.1| - 9e-57 192.4 0.0 1.1e-56 192.1 0.0 1.0 1 0 0 1 1 1 1 beta-1,4-mannooligosaccharide phosphorylase MarR_2 PF12802.7 gi|452211259|ref|YP_007491373.1| - 1.1e-05 25.2 0.0 1.5e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|452211259|ref|YP_007491373.1| - 9.7e-05 22.1 0.0 0.00012 21.8 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR PF01047.22 gi|452211259|ref|YP_007491373.1| - 0.0028 17.5 0.0 0.0038 17.1 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|452211259|ref|YP_007491373.1| - 0.0051 16.3 0.1 0.0099 15.4 0.0 1.4 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding TBPIP PF07106.13 gi|452211259|ref|YP_007491373.1| - 0.008 16.1 0.1 0.044 13.7 0.0 1.9 1 1 1 2 2 2 1 TBPIP/Hop2 winged helix domain TrmB PF01978.19 gi|452211259|ref|YP_007491373.1| - 0.0092 15.8 0.0 0.012 15.5 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.20 gi|452211259|ref|YP_007491373.1| - 0.015 15.2 0.0 0.021 14.7 0.0 1.2 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_Crp_2 PF13545.6 gi|452211259|ref|YP_007491373.1| - 0.027 14.4 0.0 0.039 13.9 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Rrf2 PF02082.20 gi|452211259|ref|YP_007491373.1| - 0.032 14.6 0.0 0.044 14.1 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator Crp PF00325.20 gi|452211259|ref|YP_007491373.1| - 0.065 12.9 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, crp family Cullin PF00888.22 gi|452211259|ref|YP_007491373.1| - 0.066 11.8 0.0 0.077 11.6 0.0 1.0 1 0 0 1 1 1 0 Cullin family HTH_20 PF12840.7 gi|452211259|ref|YP_007491373.1| - 0.073 13.1 0.0 0.094 12.8 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_9 PF08221.11 gi|452211259|ref|YP_007491373.1| - 0.08 13.1 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain Phage_rep_O PF04492.13 gi|452211259|ref|YP_007491373.1| - 0.099 13.2 0.0 0.15 12.7 0.0 1.3 1 1 0 1 1 1 0 Bacteriophage replication protein O Sigma54_DBD PF04552.13 gi|452211259|ref|YP_007491373.1| - 0.11 12.2 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 Sigma-54, DNA binding domain RuvB_C PF05491.13 gi|452211259|ref|YP_007491373.1| - 0.12 12.3 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 RuvB C-terminal winged helix domain HTH_27 PF13463.6 gi|452211259|ref|YP_007491373.1| - 0.12 12.9 0.0 0.14 12.6 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain LacI PF00356.21 gi|452211259|ref|YP_007491373.1| - 0.13 12.1 0.1 0.23 11.3 0.1 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, lacI family PrsW-protease PF13367.6 gi|452211262|ref|YP_007491376.1| - 8.7e-26 90.6 12.9 8.7e-26 90.6 12.9 1.5 1 1 0 1 1 1 1 PrsW family intramembrane metalloprotease Romo1 PF10247.9 gi|452211262|ref|YP_007491376.1| - 0.51 10.7 4.2 13 6.2 0.7 2.7 2 0 0 2 2 2 0 Reactive mitochondrial oxygen species modulator 1 SbcD_C PF12320.8 gi|452211263|ref|YP_007491377.1| - 0.099 12.9 0.0 0.12 12.7 0.0 1.1 1 0 0 1 1 1 0 Type 5 capsule protein repressor C-terminal domain Acylphosphatase PF00708.18 gi|452211264|ref|YP_007491378.1| - 9.4e-14 51.6 0.0 1.1e-13 51.4 0.0 1.0 1 0 0 1 1 1 1 Acylphosphatase DmpG_comm PF07836.11 gi|452211264|ref|YP_007491378.1| - 0.058 12.9 0.0 0.091 12.3 0.0 1.3 1 0 0 1 1 1 0 DmpG-like communication domain Cation_efflux PF01545.21 gi|452211265|ref|YP_007491379.1| - 5.7e-45 153.5 15.0 7.4e-45 153.1 15.0 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|452211265|ref|YP_007491379.1| - 3e-19 68.9 0.2 5.4e-19 68.1 0.2 1.4 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter Metalloenzyme PF01676.18 gi|452211266|ref|YP_007491380.1| - 4e-10 39.5 0.0 6.5e-10 38.8 0.0 1.3 1 0 0 1 1 1 1 Metalloenzyme superfamily Phosphodiest PF01663.22 gi|452211266|ref|YP_007491380.1| - 4.4e-06 26.5 0.0 2.2e-05 24.2 0.0 1.9 2 0 0 2 2 2 1 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.23 gi|452211266|ref|YP_007491380.1| - 0.00056 19.4 0.0 0.0017 17.8 0.0 1.8 2 0 0 2 2 2 1 Sulfatase Alk_phosphatase PF00245.20 gi|452211266|ref|YP_007491380.1| - 0.0097 14.9 0.0 0.017 14.1 0.0 1.3 1 0 0 1 1 1 1 Alkaline phosphatase DUF89 PF01937.19 gi|452211267|ref|YP_007491381.1| - 3.4e-55 187.4 0.1 4.2e-55 187.1 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF89 BRCT_assoc PF12820.7 gi|452211267|ref|YP_007491381.1| - 0.12 12.2 0.1 0.18 11.6 0.1 1.3 1 0 0 1 1 1 0 Serine-rich domain associated with BRCT CooT PF10133.9 gi|452211268|ref|YP_007491382.1| - 1.3e-18 67.0 1.2 1.5e-18 66.8 1.2 1.0 1 0 0 1 1 1 1 CO dehydrogenase accessory protein CooT Gp_dh_C PF02800.20 gi|452211269|ref|YP_007491383.1| - 4.5e-28 97.8 0.0 6.6e-28 97.3 0.0 1.3 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DapB_N PF01113.20 gi|452211269|ref|YP_007491383.1| - 1.1e-10 41.7 0.1 2.8e-10 40.4 0.1 1.7 2 0 0 2 2 2 1 Dihydrodipicolinate reductase, N-terminus Gp_dh_N PF00044.24 gi|452211269|ref|YP_007491383.1| - 2.3e-06 27.8 0.6 1.8e-05 25.0 0.0 2.6 3 0 0 3 3 3 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 gi|452211269|ref|YP_007491383.1| - 0.00041 20.6 0.1 0.0012 19.0 0.1 1.8 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain 2-Hacid_dh_C PF02826.19 gi|452211269|ref|YP_007491383.1| - 0.0018 17.7 0.1 0.0081 15.5 0.1 2.0 1 1 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Semialdhyde_dh PF01118.24 gi|452211269|ref|YP_007491383.1| - 0.006 17.0 0.0 0.057 13.9 0.1 2.3 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain NAD_binding_3 PF03447.16 gi|452211269|ref|YP_007491383.1| - 0.0061 17.2 0.1 0.015 15.9 0.1 1.7 1 1 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.22 gi|452211269|ref|YP_007491383.1| - 0.014 16.3 0.1 0.026 15.3 0.1 1.5 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold TrkA_N PF02254.18 gi|452211269|ref|YP_007491383.1| - 0.044 14.0 0.0 0.092 13.0 0.0 1.6 1 0 0 1 1 1 0 TrkA-N domain PglD_N PF17836.1 gi|452211269|ref|YP_007491383.1| - 0.13 12.9 0.0 0.3 11.7 0.0 1.7 1 0 0 1 1 1 0 PglD N-terminal domain Inositol_P PF00459.25 gi|452211270|ref|YP_007491384.1| - 5.4e-37 127.8 0.0 6.4e-37 127.5 0.0 1.0 1 0 0 1 1 1 1 Inositol monophosphatase family FBPase PF00316.20 gi|452211270|ref|YP_007491384.1| - 1.1e-06 28.3 0.0 1.6e-06 27.7 0.0 1.2 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase, N-terminal domain FBPase_glpX PF03320.13 gi|452211270|ref|YP_007491384.1| - 0.031 13.1 0.0 0.054 12.3 0.0 1.4 1 0 0 1 1 1 0 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ECR1_N PF14382.6 gi|452211270|ref|YP_007491384.1| - 0.12 12.2 0.1 0.37 10.6 0.0 1.9 2 0 0 2 2 2 0 Exosome complex exonuclease RRP4 N-terminal region NAD_kinase PF01513.21 gi|452211271|ref|YP_007491385.1| - 8.6e-58 195.8 0.5 1e-57 195.6 0.5 1.1 1 0 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.24 gi|452211271|ref|YP_007491385.1| - 0.00029 20.4 0.0 0.00054 19.6 0.0 1.4 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain HMGL-like PF00682.19 gi|452211272|ref|YP_007491386.1| - 9.6e-80 267.9 3.3 1.4e-79 267.4 3.3 1.2 1 0 0 1 1 1 1 HMGL-like Phage_TAC_12 PF12363.8 gi|452211272|ref|YP_007491386.1| - 0.067 13.6 0.1 1.1 9.7 0.0 2.7 2 0 0 2 2 2 0 Phage tail assembly chaperone protein, TAC Zn-ribbon_8 PF09723.10 gi|452211274|ref|YP_007491388.1| - 1.2e-05 25.4 1.3 1.9e-05 24.6 1.3 1.4 1 0 0 1 1 1 1 Zinc ribbon domain DZR PF12773.7 gi|452211274|ref|YP_007491388.1| - 4.1e-05 23.5 1.1 4.7e-05 23.3 1.1 1.1 1 0 0 1 1 1 1 Double zinc ribbon HypA PF01155.19 gi|452211274|ref|YP_007491388.1| - 0.00052 20.0 0.6 0.00058 19.9 0.6 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn_Tnp_IS1 PF03811.13 gi|452211274|ref|YP_007491388.1| - 0.0012 18.5 1.5 0.0053 16.4 0.2 2.1 2 0 0 2 2 2 1 InsA N-terminal domain TF_Zn_Ribbon PF08271.12 gi|452211274|ref|YP_007491388.1| - 0.0013 18.2 3.1 0.33 10.5 0.2 2.3 2 0 0 2 2 2 2 TFIIB zinc-binding TFIIS_C PF01096.18 gi|452211274|ref|YP_007491388.1| - 0.0014 18.4 4.1 0.14 12.0 0.4 2.1 2 0 0 2 2 2 2 Transcription factor S-II (TFIIS) TackOD1 PF18551.1 gi|452211274|ref|YP_007491388.1| - 0.0021 17.8 0.7 0.0022 17.7 0.7 1.1 1 0 0 1 1 1 1 Thaumarchaeal output domain 1 zf-C3HC4_3 PF13920.6 gi|452211274|ref|YP_007491388.1| - 0.0051 16.6 0.9 0.0066 16.3 0.9 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) CcmH PF03918.14 gi|452211274|ref|YP_007491388.1| - 0.0095 15.2 0.1 0.0095 15.2 0.1 1.1 1 0 0 1 1 1 1 Cytochrome C biogenesis protein Zn_ribbon_SprT PF17283.2 gi|452211274|ref|YP_007491388.1| - 0.0095 15.8 1.4 0.93 9.5 0.1 2.1 2 0 0 2 2 2 1 SprT-like zinc ribbon domain PhnA_Zn_Ribbon PF08274.12 gi|452211274|ref|YP_007491388.1| - 0.0099 15.8 1.2 2.8 8.0 0.4 2.2 2 0 0 2 2 2 1 PhnA Zinc-Ribbon zinc-ribbons_6 PF07191.12 gi|452211274|ref|YP_007491388.1| - 0.01 15.8 0.5 0.011 15.7 0.5 1.2 1 0 0 1 1 1 0 zinc-ribbons Rubredoxin_2 PF18073.1 gi|452211274|ref|YP_007491388.1| - 0.011 15.5 5.5 0.19 11.5 0.3 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain zf-RING_5 PF14634.6 gi|452211274|ref|YP_007491388.1| - 0.013 15.4 2.2 0.018 15.0 2.2 1.2 1 0 0 1 1 1 0 zinc-RING finger domain Zn_Tnp_IS91 PF14319.6 gi|452211274|ref|YP_007491388.1| - 0.015 15.3 1.1 0.019 15.0 1.1 1.2 1 0 0 1 1 1 0 Transposase zinc-binding domain zf-H2C2_2 PF13465.6 gi|452211274|ref|YP_007491388.1| - 0.024 15.1 3.5 0.67 10.5 0.5 2.2 2 0 0 2 2 2 0 Zinc-finger double domain zf-trcl PF13451.6 gi|452211274|ref|YP_007491388.1| - 0.024 14.5 2.4 0.74 9.8 0.5 2.1 2 0 0 2 2 2 0 Probable zinc-ribbon domain Prok-RING_1 PF14446.6 gi|452211274|ref|YP_007491388.1| - 0.031 14.2 2.2 0.045 13.7 2.2 1.2 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 zf-RRN7 PF11781.8 gi|452211274|ref|YP_007491388.1| - 0.039 13.6 2.4 0.95 9.2 0.2 2.2 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 zf-ribbon_3 PF13248.6 gi|452211274|ref|YP_007491388.1| - 0.043 13.2 3.9 1.5 8.3 0.3 2.3 2 0 0 2 2 2 0 zinc-ribbon domain DUF4428 PF14471.6 gi|452211274|ref|YP_007491388.1| - 0.05 13.5 3.7 0.086 12.8 3.7 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4428) zinc_ribbon_4 PF13717.6 gi|452211274|ref|YP_007491388.1| - 0.065 13.2 6.2 0.36 10.8 1.6 2.2 1 1 1 2 2 2 0 zinc-ribbon domain DNA_RNApol_7kD PF03604.13 gi|452211274|ref|YP_007491388.1| - 0.076 12.7 3.7 0.12 12.1 3.7 1.3 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit NRDD PF13597.6 gi|452211274|ref|YP_007491388.1| - 0.092 11.5 1.6 0.11 11.3 1.6 1.0 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase Zn_Tnp_IS1595 PF12760.7 gi|452211274|ref|YP_007491388.1| - 0.11 12.4 3.1 2.9 7.9 0.4 2.1 1 1 0 2 2 2 0 Transposase zinc-ribbon domain zf_UBZ PF18439.1 gi|452211274|ref|YP_007491388.1| - 0.21 11.2 3.8 0.51 10.0 0.3 2.1 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zf-Dof PF02701.15 gi|452211274|ref|YP_007491388.1| - 0.24 11.6 5.1 2.1 8.5 1.0 2.1 1 1 1 2 2 2 0 Dof domain, zinc finger zf-ACC PF17848.1 gi|452211274|ref|YP_007491388.1| - 0.3 11.2 7.2 0.75 9.9 0.3 2.2 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain zinc_ribbon_5 PF13719.6 gi|452211274|ref|YP_007491388.1| - 0.92 9.3 5.9 16 5.4 5.9 2.1 1 1 0 1 1 1 0 zinc-ribbon domain DUF3160 PF11369.8 gi|452211275|ref|YP_007491389.1| - 1.9e-248 826.1 1.9 2.1e-248 825.9 1.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3160) Mem_trans PF03547.18 gi|452211277|ref|YP_007491391.1| - 0.023 13.1 1.8 0.026 12.9 1.8 1.0 1 0 0 1 1 1 0 Membrane transport protein TPP_enzyme_C PF02775.21 gi|452211278|ref|YP_007491392.1| - 6.6e-10 39.0 0.0 1.5e-09 37.8 0.0 1.6 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.19 gi|452211278|ref|YP_007491392.1| - 0.011 15.5 0.0 0.016 14.9 0.0 1.3 1 0 0 1 1 1 0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Transket_pyr PF02779.24 gi|452211278|ref|YP_007491392.1| - 0.021 14.5 0.0 0.04 13.6 0.0 1.4 1 0 0 1 1 1 0 Transketolase, pyrimidine binding domain DXP_synthase_N PF13292.6 gi|452211278|ref|YP_007491392.1| - 0.033 13.4 0.1 0.055 12.7 0.1 1.3 1 0 0 1 1 1 0 1-deoxy-D-xylulose-5-phosphate synthase Phage_holin_3_5 PF16085.5 gi|452211278|ref|YP_007491392.1| - 0.43 10.7 3.5 2.9 8.1 0.3 2.3 2 0 0 2 2 2 0 Bacteriophage holin Hol, superfamily III DUF1743 PF08489.11 gi|452211279|ref|YP_007491393.1| - 1.5e-09 38.0 0.6 5e-06 26.6 0.0 4.6 4 1 1 5 5 5 1 Domain of unknown function (DUF1743) RadC PF04002.15 gi|452211281|ref|YP_007491395.1| - 5e-46 155.6 0.0 7.2e-46 155.1 0.0 1.2 1 0 0 1 1 1 1 RadC-like JAB domain Prok-JAB PF14464.6 gi|452211281|ref|YP_007491395.1| - 0.001 18.8 0.0 0.0023 17.7 0.0 1.6 2 0 0 2 2 2 1 Prokaryotic homologs of the JAB domain RB_A PF01858.17 gi|452211281|ref|YP_007491395.1| - 0.011 15.6 0.1 0.015 15.2 0.1 1.2 1 0 0 1 1 1 0 Retinoblastoma-associated protein A domain HHH PF00633.23 gi|452211281|ref|YP_007491395.1| - 0.011 15.6 0.0 0.028 14.3 0.0 1.7 1 0 0 1 1 1 0 Helix-hairpin-helix motif HHH_2 PF12826.7 gi|452211281|ref|YP_007491395.1| - 0.013 15.6 0.0 0.025 14.7 0.0 1.4 1 0 0 1 1 1 0 Helix-hairpin-helix motif MoaE PF02391.17 gi|452211282|ref|YP_007491396.1| - 4.1e-26 91.5 0.1 7.6e-26 90.6 0.1 1.4 1 0 0 1 1 1 1 MoaE protein MobB PF03205.14 gi|452211282|ref|YP_007491396.1| - 5.9e-17 61.8 0.0 1.3e-16 60.7 0.0 1.6 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B DUF463 PF04317.12 gi|452211282|ref|YP_007491396.1| - 0.015 14.2 0.1 0.025 13.5 0.1 1.3 1 0 0 1 1 1 0 YcjX-like family, DUF463 AAA_16 PF13191.6 gi|452211282|ref|YP_007491396.1| - 0.033 14.6 0.2 1.9 8.8 0.1 2.4 2 0 0 2 2 2 0 AAA ATPase domain GBP PF02263.19 gi|452211282|ref|YP_007491396.1| - 0.04 13.2 0.7 0.06 12.6 0.7 1.2 1 0 0 1 1 1 0 Guanylate-binding protein, N-terminal domain NTP_transf_3 PF12804.7 gi|452211283|ref|YP_007491397.1| - 6.5e-33 114.3 0.0 8.1e-33 114.0 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|452211283|ref|YP_007491397.1| - 0.0022 17.8 0.0 0.0036 17.1 0.0 1.3 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DUF523 PF04463.12 gi|452211284|ref|YP_007491398.1| - 2e-05 24.6 0.0 2.8e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF523) SPC25 PF06703.11 gi|452211285|ref|YP_007491399.1| - 0.18 11.6 0.2 0.18 11.6 0.2 3.1 3 1 0 3 3 3 0 Microsomal signal peptidase 25 kDa subunit (SPC25) UPF0182 PF03699.13 gi|452211285|ref|YP_007491399.1| - 6.8 4.7 12.4 8.7 4.3 12.4 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0182) ATP_bind_3 PF01171.20 gi|452211286|ref|YP_007491400.1| - 3.5e-13 49.7 0.0 6.4e-13 48.9 0.0 1.4 1 0 0 1 1 1 1 PP-loop family PAPS_reduct PF01507.19 gi|452211286|ref|YP_007491400.1| - 1.2e-06 28.7 0.0 1.8e-06 28.1 0.0 1.2 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family tRNA_Me_trans PF03054.16 gi|452211286|ref|YP_007491400.1| - 3.8e-05 22.6 0.0 5.3e-05 22.2 0.0 1.1 1 0 0 1 1 1 1 tRNA methyl transferase NAD_synthase PF02540.17 gi|452211286|ref|YP_007491400.1| - 0.00069 18.8 0.0 0.00092 18.4 0.0 1.2 1 0 0 1 1 1 1 NAD synthase Diphthami_syn_2 PF01902.17 gi|452211286|ref|YP_007491400.1| - 0.0012 18.3 0.1 0.0019 17.7 0.1 1.3 1 0 0 1 1 1 1 Diphthamide synthase Asn_synthase PF00733.21 gi|452211286|ref|YP_007491400.1| - 0.0013 18.5 0.0 0.0017 18.1 0.0 1.1 1 0 0 1 1 1 1 Asparagine synthase QueC PF06508.13 gi|452211286|ref|YP_007491400.1| - 0.0024 17.4 0.0 0.011 15.3 0.0 2.3 2 1 0 2 2 2 1 Queuosine biosynthesis protein QueC zn-ribbon_14 PF16503.5 gi|452211286|ref|YP_007491400.1| - 0.0032 16.9 5.1 0.0032 16.9 5.1 3.5 4 0 0 4 4 4 1 Zinc-ribbon ThiI PF02568.14 gi|452211286|ref|YP_007491400.1| - 0.045 13.3 0.0 0.1 12.2 0.0 1.5 1 0 0 1 1 1 0 Thiamine biosynthesis protein (ThiI) Spt5-NGN PF03439.13 gi|452211286|ref|YP_007491400.1| - 0.057 13.3 0.0 0.13 12.2 0.0 1.6 1 0 0 1 1 1 0 Early transcription elongation factor of RNA pol II, NGN section Ribosomal_S27e PF01667.17 gi|452211286|ref|YP_007491400.1| - 0.059 13.1 0.5 0.059 13.1 0.5 2.4 2 0 0 2 2 2 0 Ribosomal protein S27 TctA PF01970.16 gi|452211290|ref|YP_007491404.1| - 8.6e-77 258.6 29.4 1e-76 258.3 29.4 1.0 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctA family PASTA PF03793.19 gi|452211291|ref|YP_007491405.1| - 7.9e-12 44.9 0.1 1.4e-11 44.0 0.1 1.5 1 0 0 1 1 1 1 PASTA domain BAR_3_WASP_bdg PF10456.9 gi|452211291|ref|YP_007491405.1| - 0.012 15.1 0.1 0.014 14.9 0.1 1.1 1 0 0 1 1 1 0 WASP-binding domain of Sorting nexin protein DUF1664 PF07889.12 gi|452211291|ref|YP_007491405.1| - 0.026 14.6 0.9 0.049 13.7 0.5 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) tRNA-synt_1d PF00750.19 gi|452211291|ref|YP_007491405.1| - 0.11 11.4 0.7 0.19 10.6 0.7 1.4 1 1 0 1 1 1 0 tRNA synthetases class I (R) DHR10 PF18595.1 gi|452211291|ref|YP_007491405.1| - 0.14 12.2 4.0 0.09 12.8 1.7 1.7 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain zf-C4H2 PF10146.9 gi|452211291|ref|YP_007491405.1| - 0.43 10.9 2.4 0.49 10.7 2.4 1.2 1 0 0 1 1 1 0 Zinc finger-containing protein ABC_tran_CTD PF16326.5 gi|452211291|ref|YP_007491405.1| - 6.9 7.0 10.8 0.38 11.0 1.3 2.6 2 1 1 3 3 3 0 ABC transporter C-terminal domain TPR_1 PF00515.28 gi|452211292|ref|YP_007491406.1| - 1.3e-43 145.1 2.4 4.7e-07 29.4 0.0 6.8 6 1 0 7 7 7 6 Tetratricopeptide repeat TPR_2 PF07719.17 gi|452211292|ref|YP_007491406.1| - 5.2e-36 119.9 5.4 3.2e-05 23.7 0.2 6.7 7 0 0 7 7 6 6 Tetratricopeptide repeat TPR_8 PF13181.6 gi|452211292|ref|YP_007491406.1| - 4.9e-32 107.4 2.0 0.00036 20.5 0.0 6.3 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_11 PF13414.6 gi|452211292|ref|YP_007491406.1| - 1.4e-31 107.9 5.5 8.3e-07 28.6 0.0 6.9 2 2 5 7 7 7 6 TPR repeat TPR_17 PF13431.6 gi|452211292|ref|YP_007491406.1| - 5.1e-25 86.0 0.2 0.0012 19.0 0.0 6.6 6 0 0 6 6 6 5 Tetratricopeptide repeat TPR_16 PF13432.6 gi|452211292|ref|YP_007491406.1| - 5.6e-24 84.5 4.4 5.3e-08 33.4 0.4 3.6 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_19 PF14559.6 gi|452211292|ref|YP_007491406.1| - 1.1e-20 73.9 16.1 6.6e-06 26.5 0.4 4.6 1 1 5 6 6 6 6 Tetratricopeptide repeat TPR_14 PF13428.6 gi|452211292|ref|YP_007491406.1| - 2.8e-20 71.3 10.7 8.4e-05 23.1 0.2 7.2 3 3 4 7 7 7 6 Tetratricopeptide repeat TPR_12 PF13424.6 gi|452211292|ref|YP_007491406.1| - 5.3e-20 71.5 6.1 9.1e-07 29.1 0.2 4.8 3 3 1 4 4 4 3 Tetratricopeptide repeat TPR_9 PF13371.6 gi|452211292|ref|YP_007491406.1| - 3.6e-18 65.5 3.1 1.8e-06 28.0 0.1 3.8 1 1 3 4 4 4 3 Tetratricopeptide repeat TPR_7 PF13176.6 gi|452211292|ref|YP_007491406.1| - 1.2e-13 50.1 0.5 0.0026 17.7 0.0 6.3 5 1 1 6 6 6 2 Tetratricopeptide repeat TPR_6 PF13174.6 gi|452211292|ref|YP_007491406.1| - 2.1e-09 37.4 3.4 2 9.2 0.1 6.0 6 0 0 6 6 6 3 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|452211292|ref|YP_007491406.1| - 1.6e-08 34.5 5.8 0.24 11.5 0.0 5.9 5 1 1 6 6 6 3 Fis1 C-terminal tetratricopeptide repeat ANAPC3 PF12895.7 gi|452211292|ref|YP_007491406.1| - 1.8e-07 31.3 0.9 0.0095 16.1 0.0 2.8 2 1 0 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 BTAD PF03704.17 gi|452211292|ref|YP_007491406.1| - 6.5e-06 26.6 2.9 0.17 12.3 0.9 3.4 1 1 2 3 3 3 3 Bacterial transcriptional activator domain TPR_10 PF13374.6 gi|452211292|ref|YP_007491406.1| - 8.3e-06 25.5 8.5 3.3 7.7 0.0 6.2 6 0 0 6 6 6 1 Tetratricopeptide repeat TPR_15 PF13429.6 gi|452211292|ref|YP_007491406.1| - 1.2e-05 24.7 4.6 0.04 13.1 1.9 3.4 2 1 2 4 4 4 3 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|452211292|ref|YP_007491406.1| - 0.00012 21.6 0.0 0.0086 15.5 0.0 3.0 2 2 0 2 2 2 1 MalT-like TPR region NARP1 PF12569.8 gi|452211292|ref|YP_007491406.1| - 0.00013 21.0 0.6 2 7.2 0.1 3.4 1 1 2 3 3 3 2 NMDA receptor-regulated protein 1 TPR_21 PF09976.9 gi|452211292|ref|YP_007491406.1| - 0.00083 19.1 0.7 0.75 9.5 0.1 3.8 1 1 3 4 4 4 1 Tetratricopeptide repeat-like domain TPR_4 PF07721.14 gi|452211292|ref|YP_007491406.1| - 0.0013 19.1 1.3 0.74 10.6 0.0 4.0 4 0 0 4 4 4 1 Tetratricopeptide repeat PPTA PF01239.22 gi|452211292|ref|YP_007491406.1| - 0.0014 18.3 0.0 0.2 11.5 0.0 3.3 3 0 0 3 3 3 1 Protein prenyltransferase alpha subunit repeat DUF3856 PF12968.7 gi|452211292|ref|YP_007491406.1| - 0.0021 18.2 0.9 29 4.7 0.0 4.9 3 2 2 5 5 5 0 Domain of Unknown Function (DUF3856) TPR_20 PF14561.6 gi|452211292|ref|YP_007491406.1| - 0.015 15.6 4.2 0.21 12.0 0.0 3.7 3 1 2 5 5 4 0 Tetratricopeptide repeat SRP_TPR_like PF17004.5 gi|452211292|ref|YP_007491406.1| - 0.021 14.8 0.3 3.6 7.6 0.0 3.1 2 1 0 2 2 2 0 Putative TPR-like repeat PPR PF01535.20 gi|452211292|ref|YP_007491406.1| - 0.19 12.1 2.1 44 4.6 0.0 4.0 4 0 0 4 4 3 0 PPR repeat MIT PF04212.18 gi|452211292|ref|YP_007491406.1| - 0.69 10.0 5.4 1.1e+02 2.9 0.1 4.7 5 0 0 5 5 5 0 MIT (microtubule interacting and transport) domain TPR_1 PF00515.28 gi|452211293|ref|YP_007491407.1| - 1.4e-28 97.5 11.8 5.3e-09 35.5 0.0 4.8 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_8 PF13181.6 gi|452211293|ref|YP_007491407.1| - 7.7e-26 88.1 7.9 1e-07 31.6 0.0 4.7 5 0 0 5 5 4 3 Tetratricopeptide repeat TPR_2 PF07719.17 gi|452211293|ref|YP_007491407.1| - 2.9e-25 86.3 2.9 5.3e-07 29.3 0.0 4.3 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_11 PF13414.6 gi|452211293|ref|YP_007491407.1| - 4.3e-20 71.1 4.0 2e-05 24.2 0.1 4.4 1 1 3 4 4 4 4 TPR repeat TPR_17 PF13431.6 gi|452211293|ref|YP_007491407.1| - 3.7e-17 61.4 0.6 0.0013 18.9 0.0 4.5 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_12 PF13424.6 gi|452211293|ref|YP_007491407.1| - 3.1e-16 59.4 4.3 1.9e-06 28.1 0.1 3.5 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_14 PF13428.6 gi|452211293|ref|YP_007491407.1| - 3.8e-16 58.4 0.1 3.3e-05 24.3 0.0 4.1 2 1 2 4 4 4 3 Tetratricopeptide repeat TPR_9 PF13371.6 gi|452211293|ref|YP_007491407.1| - 4.9e-15 55.4 0.1 4.2e-08 33.2 0.0 2.1 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 gi|452211293|ref|YP_007491407.1| - 8.3e-13 48.8 0.0 7.4e-07 29.7 0.0 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_7 PF13176.6 gi|452211293|ref|YP_007491407.1| - 2.3e-11 42.9 2.9 0.008 16.1 0.0 4.2 4 1 0 4 4 4 3 Tetratricopeptide repeat TPR_19 PF14559.6 gi|452211293|ref|YP_007491407.1| - 1.6e-09 38.1 0.4 0.00025 21.5 0.0 3.2 2 1 1 3 3 3 3 Tetratricopeptide repeat TPR_10 PF13374.6 gi|452211293|ref|YP_007491407.1| - 8.3e-09 35.0 0.3 0.19 11.6 0.1 4.3 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_6 PF13174.6 gi|452211293|ref|YP_007491407.1| - 9.5e-09 35.4 0.2 0.44 11.3 0.0 4.0 5 0 0 5 5 3 3 Tetratricopeptide repeat MIT PF04212.18 gi|452211293|ref|YP_007491407.1| - 2.1e-08 34.1 1.7 0.12 12.4 0.0 4.1 4 0 0 4 4 4 3 MIT (microtubule interacting and transport) domain ANAPC3 PF12895.7 gi|452211293|ref|YP_007491407.1| - 1.8e-06 28.1 3.0 0.00076 19.7 0.2 2.3 1 1 1 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 NARP1 PF12569.8 gi|452211293|ref|YP_007491407.1| - 2e-06 27.0 1.3 0.0019 17.2 0.0 2.5 1 1 1 2 2 2 2 NMDA receptor-regulated protein 1 Fis1_TPR_C PF14853.6 gi|452211293|ref|YP_007491407.1| - 2.8e-06 27.3 3.6 1 9.5 0.0 3.9 3 1 1 4 4 4 3 Fis1 C-terminal tetratricopeptide repeat DUF3856 PF12968.7 gi|452211293|ref|YP_007491407.1| - 6.4e-05 23.1 0.1 0.63 10.1 0.1 3.0 1 1 1 2 2 2 2 Domain of Unknown Function (DUF3856) TPR_15 PF13429.6 gi|452211293|ref|YP_007491407.1| - 0.00057 19.2 0.0 0.79 8.9 0.0 3.2 2 2 0 2 2 2 1 Tetratricopeptide repeat HTH_Bact PF18768.1 gi|452211293|ref|YP_007491407.1| - 0.0024 17.4 0.2 0.36 10.4 0.0 3.9 3 2 2 5 5 5 1 Helix-turn-helix bacterial domain TPR_3 PF07720.12 gi|452211293|ref|YP_007491407.1| - 0.0025 17.8 0.3 2.8 8.0 0.1 3.4 4 0 0 4 4 4 1 Tetratricopeptide repeat PPR PF01535.20 gi|452211293|ref|YP_007491407.1| - 0.0099 16.1 1.3 3.3 8.2 0.1 3.7 3 1 0 3 3 3 1 PPR repeat BTAD PF03704.17 gi|452211293|ref|YP_007491407.1| - 0.021 15.3 0.4 1.7 9.0 0.0 2.5 1 1 0 2 2 2 0 Bacterial transcriptional activator domain TPR_21 PF09976.9 gi|452211293|ref|YP_007491407.1| - 0.05 13.3 0.1 2.2 7.9 0.1 2.8 1 1 2 3 3 3 0 Tetratricopeptide repeat-like domain TPR_5 PF12688.7 gi|452211293|ref|YP_007491407.1| - 0.15 12.3 0.1 22 5.3 0.0 2.6 1 1 2 3 3 3 0 Tetratrico peptide repeat CbiA PF01656.23 gi|452211294|ref|YP_007491408.1| - 0.00042 20.4 0.0 0.00055 20.0 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.6 gi|452211294|ref|YP_007491408.1| - 0.0079 16.0 0.0 0.012 15.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain ParA PF10609.9 gi|452211294|ref|YP_007491408.1| - 0.013 14.9 0.0 0.11 11.9 0.0 2.0 1 1 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase Disaggr_repeat PF06848.11 gi|452211296|ref|YP_007491410.1| - 9.8e-76 253.4 1.6 1.7e-75 252.6 1.6 1.4 1 0 0 1 1 1 1 Disaggregatase related repeat Disaggr_assoc PF08480.10 gi|452211296|ref|YP_007491410.1| - 5.1e-67 225.4 13.1 1.2e-66 224.2 13.1 1.7 1 0 0 1 1 1 1 Disaggregatase related Beta_helix PF13229.6 gi|452211296|ref|YP_007491410.1| - 3.7e-15 56.1 34.2 4e-14 52.8 12.2 2.6 1 1 1 2 2 2 2 Right handed beta helix region DUF5123 PF17161.4 gi|452211296|ref|YP_007491410.1| - 1.6e-08 35.6 5.2 3.2e-08 34.6 2.6 2.7 2 0 0 2 2 2 1 Domain of unknown function (DUF5123) PurS PF02700.14 gi|452211299|ref|YP_007491413.1| - 9.7e-28 96.2 0.4 1.1e-27 96.0 0.4 1.0 1 0 0 1 1 1 1 Phosphoribosylformylglycinamidine (FGAM) synthase GATase_5 PF13507.6 gi|452211300|ref|YP_007491414.1| - 1.7e-47 161.7 0.0 1.9e-47 161.6 0.0 1.0 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase_3 PF07685.14 gi|452211300|ref|YP_007491414.1| - 4.5e-09 36.2 0.0 8.6e-09 35.3 0.0 1.5 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase PF00117.28 gi|452211300|ref|YP_007491414.1| - 5.2e-09 36.1 0.0 8.6e-09 35.4 0.0 1.3 1 1 0 1 1 1 1 Glutamine amidotransferase class-I DJ-1_PfpI PF01965.24 gi|452211300|ref|YP_007491414.1| - 1.8e-08 34.4 0.0 2.6e-08 33.8 0.0 1.2 1 0 0 1 1 1 1 DJ-1/PfpI family SNO PF01174.19 gi|452211300|ref|YP_007491414.1| - 7.5e-05 22.7 0.0 0.0002 21.2 0.0 1.6 2 0 0 2 2 2 1 SNO glutamine amidotransferase family Peptidase_C26 PF07722.13 gi|452211300|ref|YP_007491414.1| - 0.0014 18.4 0.0 0.0028 17.5 0.0 1.6 1 1 0 1 1 1 1 Peptidase C26 FGE-sulfatase PF03781.16 gi|452211301|ref|YP_007491415.1| - 8.3e-49 166.5 1.4 5.4e-48 163.8 1.4 2.0 1 1 0 1 1 1 1 Sulfatase-modifying factor enzyme 1 DUF1724 PF08350.10 gi|452211303|ref|YP_007491417.1| - 9.9e-18 64.0 0.0 2e-17 63.0 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|452211303|ref|YP_007491417.1| - 7.4e-05 22.5 0.0 0.00017 21.4 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|452211303|ref|YP_007491417.1| - 0.047 13.6 0.0 0.12 12.3 0.0 1.7 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_45 PF14947.6 gi|452211303|ref|YP_007491417.1| - 0.067 13.2 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DDDD PF10161.9 gi|452211303|ref|YP_007491417.1| - 0.091 12.5 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 Putative mitochondrial precursor protein HTH_11 PF08279.12 gi|452211303|ref|YP_007491417.1| - 0.095 12.7 0.5 0.19 11.7 0.1 1.8 2 0 0 2 2 2 0 HTH domain HTH_20 PF12840.7 gi|452211303|ref|YP_007491417.1| - 0.11 12.6 0.1 0.4 10.8 0.0 1.9 3 0 0 3 3 3 0 Helix-turn-helix domain DUF429 PF04250.13 gi|452211304|ref|YP_007491418.1| - 1e-44 152.8 0.0 1.2e-44 152.6 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF429) tRNA-synt_His PF13393.6 gi|452211305|ref|YP_007491419.1| - 0.073 12.3 0.5 0.092 12.0 0.5 1.1 1 0 0 1 1 1 0 Histidyl-tRNA synthetase tRNA_synthFbeta PF17759.1 gi|452211306|ref|YP_007491420.1| - 5e-42 143.7 0.1 8.4e-42 143.0 0.1 1.4 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain B5 PF03484.15 gi|452211306|ref|YP_007491420.1| - 2.2e-18 66.3 0.4 3.8e-17 62.3 0.1 2.6 2 0 0 2 2 2 1 tRNA synthetase B5 domain B3_4 PF03483.17 gi|452211306|ref|YP_007491420.1| - 4.9e-15 55.6 0.0 1e-14 54.6 0.0 1.5 1 0 0 1 1 1 1 B3/4 domain tRNA-synt_2d PF01409.20 gi|452211306|ref|YP_007491420.1| - 2.4e-07 30.5 0.1 1.2e-06 28.2 0.1 1.9 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) PhetRS_B1 PF18262.1 gi|452211306|ref|YP_007491420.1| - 0.00064 19.9 0.0 1.4 9.2 0.0 3.3 2 1 0 2 2 2 2 Phe-tRNA synthetase beta subunit B1 domain Diphthami_syn_2 PF01902.17 gi|452211308|ref|YP_007491422.1| - 1.3e-41 142.5 0.0 1.6e-41 142.3 0.0 1.0 1 0 0 1 1 1 1 Diphthamide synthase Lactamase_B PF00753.27 gi|452211310|ref|YP_007491424.1| - 9.7e-14 51.8 0.0 5.3e-13 49.4 0.0 1.9 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|452211310|ref|YP_007491424.1| - 4.1e-05 23.2 0.0 7.3e-05 22.4 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|452211310|ref|YP_007491424.1| - 0.0029 17.5 0.0 0.0049 16.8 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain GATase PF00117.28 gi|452211313|ref|YP_007491427.1| - 2.2e-45 154.8 0.0 2.6e-45 154.5 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|452211313|ref|YP_007491427.1| - 1.5e-18 67.3 0.1 5.7e-18 65.5 0.1 1.8 1 1 0 1 1 1 1 Peptidase C26 Chorismate_bind PF00425.18 gi|452211314|ref|YP_007491428.1| - 4e-96 321.5 1.1 2.4e-91 305.9 0.0 2.8 2 1 0 2 2 2 2 chorismate binding enzyme Anth_synt_I_N PF04715.13 gi|452211314|ref|YP_007491428.1| - 4.5e-17 62.6 3.8 5.3e-15 55.9 2.4 3.4 2 1 0 2 2 2 1 Anthranilate synthase component I, N terminal region DUF4471 PF14740.6 gi|452211314|ref|YP_007491428.1| - 0.044 13.0 0.2 0.072 12.3 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4471) AP3D1 PF06375.11 gi|452211314|ref|YP_007491428.1| - 0.062 13.5 5.1 0.12 12.6 5.1 1.4 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 DUF3510 PF12022.8 gi|452211314|ref|YP_007491428.1| - 0.51 10.7 3.6 1.3 9.5 3.6 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3510) TPX2 PF06886.11 gi|452211314|ref|YP_007491428.1| - 0.88 9.8 15.0 2.8 8.3 15.0 1.9 1 0 0 1 1 1 0 Targeting protein for Xklp2 (TPX2) IlvC PF01450.19 gi|452211314|ref|YP_007491428.1| - 0.95 9.7 6.1 2.9 8.1 5.7 2.1 2 1 0 2 2 2 0 Acetohydroxy acid isomeroreductase, catalytic domain PRAI PF00697.22 gi|452211315|ref|YP_007491429.1| - 5.2e-33 114.5 0.0 1.5e-32 113.0 0.0 1.6 1 1 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase TMP-TENI PF02581.17 gi|452211315|ref|YP_007491429.1| - 0.0026 17.1 0.0 0.0053 16.1 0.0 1.5 2 0 0 2 2 2 1 Thiamine monophosphate synthase DUF4152 PF13680.6 gi|452211315|ref|YP_007491429.1| - 0.014 14.8 0.2 0.047 13.1 0.1 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF4152) FMN_dh PF01070.18 gi|452211315|ref|YP_007491429.1| - 0.017 14.1 0.0 3.6 6.5 0.0 2.7 1 1 1 2 2 2 0 FMN-dependent dehydrogenase His_biosynth PF00977.21 gi|452211315|ref|YP_007491429.1| - 0.049 13.1 0.0 0.11 12.0 0.0 1.5 2 0 0 2 2 2 0 Histidine biosynthesis protein Glyco_transf_4 PF13439.6 gi|452211315|ref|YP_007491429.1| - 0.068 13.2 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Glycos_transf_3 PF00591.21 gi|452211316|ref|YP_007491430.1| - 4.2e-96 321.4 0.6 4.2e-96 321.4 0.6 1.3 2 0 0 2 2 2 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.17 gi|452211316|ref|YP_007491430.1| - 1.4e-11 44.0 0.2 3.2e-11 42.9 0.2 1.6 1 0 0 1 1 1 1 Glycosyl transferase family, helical bundle domain PheRS_DBD1 PF18552.1 gi|452211316|ref|YP_007491430.1| - 0.13 12.0 0.0 0.62 9.9 0.0 2.1 2 0 0 2 2 2 0 PheRS DNA binding domain 1 Trp_syntA PF00290.20 gi|452211317|ref|YP_007491431.1| - 3.4e-94 314.5 0.1 4.1e-94 314.3 0.1 1.0 1 0 0 1 1 1 1 Tryptophan synthase alpha chain PcrB PF01884.17 gi|452211317|ref|YP_007491431.1| - 6.9e-05 22.4 0.3 0.0055 16.2 0.2 2.2 2 0 0 2 2 2 1 PcrB family His_biosynth PF00977.21 gi|452211317|ref|YP_007491431.1| - 0.00016 21.2 0.2 0.00038 20.0 0.2 1.6 1 0 0 1 1 1 1 Histidine biosynthesis protein PA PF02225.22 gi|452211317|ref|YP_007491431.1| - 0.00045 20.2 0.4 0.29 11.2 0.1 2.4 1 1 0 2 2 2 2 PA domain IGPS PF00218.21 gi|452211317|ref|YP_007491431.1| - 0.01 15.0 0.0 0.015 14.4 0.0 1.3 1 0 0 1 1 1 0 Indole-3-glycerol phosphate synthase DHO_dh PF01180.21 gi|452211317|ref|YP_007491431.1| - 0.018 14.3 0.2 0.03 13.5 0.2 1.3 1 1 0 1 1 1 0 Dihydroorotate dehydrogenase NanE PF04131.14 gi|452211317|ref|YP_007491431.1| - 0.02 14.1 0.1 0.067 12.4 0.1 1.8 2 0 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase PucR PF07905.11 gi|452211317|ref|YP_007491431.1| - 0.076 13.3 0.2 0.46 10.8 0.0 2.3 3 0 0 3 3 3 0 Purine catabolism regulatory protein-like family IMPDH PF00478.25 gi|452211317|ref|YP_007491431.1| - 0.082 11.9 0.4 2.8 6.8 0.1 2.2 2 0 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain FMN_dh PF01070.18 gi|452211317|ref|YP_007491431.1| - 0.13 11.3 1.8 0.52 9.3 0.4 2.4 3 0 0 3 3 3 0 FMN-dependent dehydrogenase PALP PF00291.25 gi|452211318|ref|YP_007491432.1| - 3.1e-43 148.3 2.3 3.7e-43 148.0 2.3 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme IGPS PF00218.21 gi|452211319|ref|YP_007491433.1| - 5.8e-64 215.7 0.1 7e-64 215.4 0.1 1.0 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase NanE PF04131.14 gi|452211319|ref|YP_007491433.1| - 3.7e-05 23.0 0.1 0.0083 15.3 0.0 3.0 3 1 1 4 4 4 1 Putative N-acetylmannosamine-6-phosphate epimerase FMN_dh PF01070.18 gi|452211319|ref|YP_007491433.1| - 0.00075 18.6 0.0 0.0015 17.6 0.0 1.4 1 0 0 1 1 1 1 FMN-dependent dehydrogenase ThiG PF05690.14 gi|452211319|ref|YP_007491433.1| - 0.0015 17.9 0.0 0.0088 15.4 0.0 2.1 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG His_biosynth PF00977.21 gi|452211319|ref|YP_007491433.1| - 0.017 14.6 0.0 0.033 13.6 0.0 1.4 1 0 0 1 1 1 0 Histidine biosynthesis protein IMPDH PF00478.25 gi|452211319|ref|YP_007491433.1| - 0.047 12.7 0.0 0.091 11.7 0.0 1.4 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain DHO_dh PF01180.21 gi|452211319|ref|YP_007491433.1| - 0.058 12.6 0.0 0.33 10.1 0.0 2.1 2 0 0 2 2 2 0 Dihydroorotate dehydrogenase QRPTase_C PF01729.19 gi|452211319|ref|YP_007491433.1| - 0.12 12.2 0.1 0.2 11.4 0.1 1.3 1 0 0 1 1 1 0 Quinolinate phosphoribosyl transferase, C-terminal domain Bac_luciferase PF00296.20 gi|452211320|ref|YP_007491434.1| - 1.6e-36 126.3 0.0 1.8e-36 126.2 0.0 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase DUF3802 PF12290.8 gi|452211320|ref|YP_007491434.1| - 0.21 12.1 0.1 0.46 11.0 0.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3802) Cyclase PF04199.13 gi|452211321|ref|YP_007491435.1| - 1.2e-20 74.1 0.0 1.6e-20 73.7 0.0 1.2 1 0 0 1 1 1 1 Putative cyclase Pro_isomerase PF00160.21 gi|452211325|ref|YP_007491439.1| - 5.3e-53 179.5 1.1 5.9e-53 179.4 1.1 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Ribonuc_red_lgC PF02867.15 gi|452211326|ref|YP_007491440.1| - 6e-105 351.7 0.0 1.5e-63 215.2 0.0 3.1 1 1 1 2 2 2 2 Ribonucleotide reductase, barrel domain Ribonuc_red_lgN PF00317.21 gi|452211326|ref|YP_007491440.1| - 1.1e-14 54.2 0.0 2.4e-14 53.1 0.0 1.6 1 0 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain EamA PF00892.20 gi|452211327|ref|YP_007491441.1| - 1e-29 103.4 32.6 1.3e-15 57.8 8.5 2.1 2 0 0 2 2 2 2 EamA-like transporter family EamA PF00892.20 gi|452211328|ref|YP_007491442.1| - 1.4e-30 106.2 32.5 6.3e-16 58.8 8.1 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 gi|452211328|ref|YP_007491442.1| - 3.5e-05 23.3 3.6 5.9e-05 22.6 3.6 1.5 1 1 0 1 1 1 1 Triose-phosphate Transporter family DUF2070 PF09843.9 gi|452211328|ref|YP_007491442.1| - 1 7.5 28.7 0.04 12.2 16.0 2.0 1 1 1 2 2 2 0 Predicted membrane protein (DUF2070) YwiC PF14256.6 gi|452211328|ref|YP_007491442.1| - 9.4 6.6 12.4 1.5 9.1 3.4 3.0 1 1 2 3 3 3 0 YwiC-like protein ABC_tran PF00005.27 gi|452211329|ref|YP_007491443.1| - 1.8e-31 109.5 0.0 2.5e-31 109.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|452211329|ref|YP_007491443.1| - 7.9e-10 38.5 0.0 8.9e-05 22.0 0.0 2.1 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|452211329|ref|YP_007491443.1| - 8e-07 29.2 0.1 0.0063 16.4 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|452211329|ref|YP_007491443.1| - 0.00015 21.4 0.1 0.00031 20.4 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|452211329|ref|YP_007491443.1| - 0.00046 20.6 0.1 0.00097 19.6 0.1 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 gi|452211329|ref|YP_007491443.1| - 0.00065 19.3 0.0 0.052 13.1 0.1 2.3 2 1 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|452211329|ref|YP_007491443.1| - 0.0011 19.3 0.2 0.0063 16.8 0.2 2.1 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|452211329|ref|YP_007491443.1| - 0.0014 18.4 0.0 0.0053 16.5 0.0 1.7 2 0 0 2 2 2 1 AAA ATPase domain IstB_IS21 PF01695.17 gi|452211329|ref|YP_007491443.1| - 0.0017 18.1 0.0 0.16 11.7 0.0 2.2 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_10 PF12846.7 gi|452211329|ref|YP_007491443.1| - 0.0025 16.8 0.0 0.41 9.5 0.0 2.1 2 0 0 2 2 2 1 AAA-like domain AAA_23 PF13476.6 gi|452211329|ref|YP_007491443.1| - 0.0048 17.4 0.1 0.0087 16.6 0.1 1.4 1 0 0 1 1 1 1 AAA domain NACHT PF05729.12 gi|452211329|ref|YP_007491443.1| - 0.016 15.1 0.1 0.24 11.3 0.1 2.3 1 1 1 2 2 2 0 NACHT domain RsgA_GTPase PF03193.16 gi|452211329|ref|YP_007491443.1| - 0.017 15.1 0.1 0.028 14.3 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_30 PF13604.6 gi|452211329|ref|YP_007491443.1| - 0.023 14.4 0.0 0.044 13.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain RNA12 PF10443.9 gi|452211329|ref|YP_007491443.1| - 0.025 13.3 0.0 0.081 11.6 0.0 1.7 2 0 0 2 2 2 0 RNA12 protein DUF87 PF01935.17 gi|452211329|ref|YP_007491443.1| - 0.028 14.5 0.3 0.063 13.4 0.2 1.6 2 0 0 2 2 1 0 Helicase HerA, central domain AAA_33 PF13671.6 gi|452211329|ref|YP_007491443.1| - 0.073 13.2 0.1 0.16 12.1 0.0 1.7 2 0 0 2 2 1 0 AAA domain NB-ARC PF00931.22 gi|452211329|ref|YP_007491443.1| - 0.082 12.1 0.2 0.16 11.1 0.2 1.4 1 0 0 1 1 1 0 NB-ARC domain MMR_HSR1 PF01926.23 gi|452211329|ref|YP_007491443.1| - 0.086 12.9 0.2 0.26 11.4 0.2 1.9 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_7 PF12775.7 gi|452211329|ref|YP_007491443.1| - 0.11 12.0 0.0 0.21 11.1 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_24 PF13479.6 gi|452211329|ref|YP_007491443.1| - 0.12 12.1 0.0 0.2 11.4 0.0 1.5 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 gi|452211329|ref|YP_007491443.1| - 0.12 12.7 0.0 0.32 11.4 0.0 1.8 1 0 0 1 1 1 0 RNA helicase DUF3987 PF13148.6 gi|452211329|ref|YP_007491443.1| - 0.15 11.1 0.0 0.24 10.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) Cytidylate_kin PF02224.18 gi|452211329|ref|YP_007491443.1| - 0.15 11.8 0.5 0.42 10.3 0.2 1.9 1 1 1 2 2 2 0 Cytidylate kinase AAA_18 PF13238.6 gi|452211329|ref|YP_007491443.1| - 0.19 12.3 0.5 0.37 11.3 0.2 1.7 2 1 0 2 2 1 0 AAA domain DUF296 PF03479.15 gi|452211330|ref|YP_007491444.1| - 1.9e-13 50.7 0.0 2.2e-13 50.5 0.0 1.1 1 0 0 1 1 1 1 Plants and Prokaryotes Conserved (PCC) domain TrmB PF01978.19 gi|452211331|ref|YP_007491445.1| - 0.0011 18.8 0.0 0.0024 17.7 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB PadR PF03551.14 gi|452211331|ref|YP_007491445.1| - 0.007 16.3 0.6 0.016 15.2 0.0 1.9 3 0 0 3 3 3 1 Transcriptional regulator PadR-like family SMC_ScpB PF04079.16 gi|452211331|ref|YP_007491445.1| - 0.028 14.0 0.0 0.039 13.6 0.0 1.4 1 1 0 1 1 1 0 Segregation and condensation complex subunit ScpB Enolase_C PF00113.22 gi|452211333|ref|YP_007491447.1| - 1.2e-99 333.4 0.8 1.6e-99 332.9 0.8 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 gi|452211333|ref|YP_007491447.1| - 3.7e-61 205.1 0.0 7e-61 204.2 0.0 1.5 1 0 0 1 1 1 1 Enolase, N-terminal domain MR_MLE_C PF13378.6 gi|452211333|ref|YP_007491447.1| - 3.1e-05 23.7 0.0 4.7e-05 23.0 0.0 1.3 1 0 0 1 1 1 1 Enolase C-terminal domain-like MAAL_C PF07476.11 gi|452211333|ref|YP_007491447.1| - 0.0058 15.8 0.0 0.01 15.0 0.0 1.3 1 0 0 1 1 1 1 Methylaspartate ammonia-lyase C-terminus AAA_5 PF07728.14 gi|452211334|ref|YP_007491448.1| - 4.8e-26 91.4 0.0 9.6e-26 90.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_lid_8 PF17868.1 gi|452211334|ref|YP_007491448.1| - 5e-18 64.8 1.7 5e-18 64.8 1.7 2.0 2 0 0 2 2 2 1 AAA lid domain AAA_3 PF07726.11 gi|452211334|ref|YP_007491448.1| - 2.8e-05 24.0 0.0 0.00033 20.5 0.0 2.1 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA PF00004.29 gi|452211334|ref|YP_007491448.1| - 9.4e-05 22.9 0.0 0.00027 21.4 0.0 1.9 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 gi|452211334|ref|YP_007491448.1| - 0.014 15.1 0.0 0.027 14.2 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_16 PF13191.6 gi|452211334|ref|YP_007491448.1| - 0.018 15.5 0.2 0.17 12.3 0.0 2.5 2 1 0 2 2 2 0 AAA ATPase domain Mg_chelatase PF01078.21 gi|452211334|ref|YP_007491448.1| - 0.023 14.1 0.0 0.07 12.5 0.0 1.7 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI HypA PF01155.19 gi|452211334|ref|YP_007491448.1| - 0.048 13.7 0.9 0.18 11.8 0.2 2.1 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA MCM PF00493.23 gi|452211334|ref|YP_007491448.1| - 0.096 11.8 0.0 0.38 9.8 0.0 1.9 3 0 0 3 3 3 0 MCM P-loop domain SCA7 PF08313.12 gi|452211334|ref|YP_007491448.1| - 0.18 11.7 0.0 0.39 10.6 0.0 1.5 1 0 0 1 1 1 0 SCA7, zinc-binding domain TPP_enzyme_N PF02776.18 gi|452211335|ref|YP_007491449.1| - 8.5e-50 168.7 0.0 3e-49 166.9 0.0 1.9 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|452211335|ref|YP_007491449.1| - 8.2e-40 136.1 0.1 1.5e-38 132.0 0.0 2.3 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|452211335|ref|YP_007491449.1| - 3.3e-24 85.2 0.0 6.8e-24 84.2 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain Pyridox_ox_2 PF12900.7 gi|452211336|ref|YP_007491450.1| - 7.6e-24 84.3 0.0 8.7e-24 84.1 0.0 1.0 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Putative_PNPOx PF01243.20 gi|452211336|ref|YP_007491450.1| - 3.8e-06 27.0 0.0 5.3e-06 26.5 0.0 1.3 1 1 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase DUF1845 PF08900.11 gi|452211336|ref|YP_007491450.1| - 0.11 12.2 0.0 0.19 11.4 0.0 1.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1845) AA_permease_2 PF13520.6 gi|452211339|ref|YP_007491453.1| - 2.4e-26 92.6 48.0 2.9e-26 92.3 48.0 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|452211339|ref|YP_007491453.1| - 7.4e-20 71.0 40.1 1e-19 70.5 40.1 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 gi|452211340|ref|YP_007491454.1| - 1.2e-24 86.9 46.7 1.7e-24 86.5 46.7 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|452211340|ref|YP_007491454.1| - 1.5e-17 63.4 42.8 5e-17 61.7 42.8 1.6 1 1 0 1 1 1 1 Amino acid permease DUF5348 PF17295.2 gi|452211341|ref|YP_007491455.1| - 0.085 12.8 0.8 0.13 12.2 0.8 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF5348) DUF1474 PF07342.11 gi|452211342|ref|YP_007491456.1| - 0.095 13.2 2.3 0.46 11.0 0.6 2.4 1 1 2 3 3 3 0 Protein of unknown function (DUF1474) TauE PF01925.19 gi|452211343|ref|YP_007491457.1| - 4.1e-48 164.1 31.3 4.8e-48 163.9 31.3 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE V4R PF02830.18 gi|452211343|ref|YP_007491457.1| - 0.068 13.2 0.3 0.5 10.4 0.0 2.1 2 0 0 2 2 2 0 V4R domain MacB_PCD PF12704.7 gi|452211344|ref|YP_007491458.1| - 4.3e-17 63.1 2.1 6.4e-17 62.6 2.1 1.3 1 0 0 1 1 1 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|452211344|ref|YP_007491458.1| - 2.5e-15 56.7 12.7 3e-15 56.5 3.5 3.1 3 0 0 3 3 3 1 FtsX-like permease family Na_K-ATPase PF00287.18 gi|452211344|ref|YP_007491458.1| - 0.29 10.3 0.1 8.8 5.4 0.0 2.1 2 0 0 2 2 2 0 Sodium / potassium ATPase beta chain MarR PF01047.22 gi|452211345|ref|YP_007491459.1| - 2.6e-14 52.9 0.0 4.9e-14 52.0 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|452211345|ref|YP_007491459.1| - 1.3e-10 41.6 0.0 1.9e-10 41.0 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|452211345|ref|YP_007491459.1| - 4.2e-09 36.1 0.0 6.9e-09 35.5 0.0 1.4 1 0 0 1 1 1 1 MarR family HxlR PF01638.17 gi|452211345|ref|YP_007491459.1| - 4.3e-05 23.3 0.0 7.6e-05 22.5 0.0 1.4 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_IclR PF09339.10 gi|452211345|ref|YP_007491459.1| - 0.00017 21.3 0.0 0.00036 20.3 0.0 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_34 PF13601.6 gi|452211345|ref|YP_007491459.1| - 0.0004 20.5 0.0 0.00072 19.7 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.19 gi|452211345|ref|YP_007491459.1| - 0.00062 19.6 0.0 0.0013 18.5 0.0 1.7 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_45 PF14947.6 gi|452211345|ref|YP_007491459.1| - 0.00065 19.6 0.0 0.001 19.0 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_Crp_2 PF13545.6 gi|452211345|ref|YP_007491459.1| - 0.002 18.1 0.1 0.0046 16.9 0.0 1.8 1 1 0 2 2 2 1 Crp-like helix-turn-helix domain SMC_ScpB PF04079.16 gi|452211345|ref|YP_007491459.1| - 0.0029 17.3 0.0 0.0046 16.6 0.0 1.4 1 1 0 1 1 1 1 Segregation and condensation complex subunit ScpB Fe_dep_repress PF01325.19 gi|452211345|ref|YP_007491459.1| - 0.022 15.0 0.1 0.11 12.8 0.0 2.1 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain DUF4364 PF14277.6 gi|452211345|ref|YP_007491459.1| - 0.027 14.2 0.0 0.03 14.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4364) FtsK_gamma PF09397.10 gi|452211345|ref|YP_007491459.1| - 0.045 13.6 0.0 0.083 12.7 0.0 1.4 1 0 0 1 1 1 0 Ftsk gamma domain PadR PF03551.14 gi|452211345|ref|YP_007491459.1| - 0.055 13.4 0.0 0.09 12.8 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family FeoC PF09012.10 gi|452211345|ref|YP_007491459.1| - 0.068 13.3 0.3 0.54 10.4 0.0 2.4 2 1 1 3 3 3 0 FeoC like transcriptional regulator DUF3116 PF11313.8 gi|452211345|ref|YP_007491459.1| - 0.093 12.6 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3116) MMPL PF03176.15 gi|452211346|ref|YP_007491460.1| - 1.5e-61 208.2 10.6 1.3e-30 106.5 1.3 2.3 2 0 0 2 2 2 2 MMPL family Sterol-sensing PF12349.8 gi|452211346|ref|YP_007491460.1| - 2.6e-10 40.3 17.1 1.6e-06 28.0 5.2 2.5 2 0 0 2 2 2 2 Sterol-sensing domain of SREBP cleavage-activation ACR_tran PF00873.19 gi|452211346|ref|YP_007491460.1| - 6.8e-10 37.3 29.7 2.4e-06 25.6 10.0 2.3 2 0 0 2 2 2 2 AcrB/AcrD/AcrF family SecD_SecF PF02355.16 gi|452211346|ref|YP_007491460.1| - 1.4e-09 37.6 10.9 1.4e-09 37.6 10.9 3.0 2 1 0 2 2 2 1 Protein export membrane protein Patched PF02460.18 gi|452211346|ref|YP_007491460.1| - 5.1e-09 34.8 20.5 3e-05 22.3 9.9 2.5 3 0 0 3 3 3 2 Patched family MarR PF01047.22 gi|452211348|ref|YP_007491462.1| - 1.1e-10 41.3 0.1 1.8e-10 40.5 0.1 1.5 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|452211348|ref|YP_007491462.1| - 1.1e-08 35.4 0.3 2.7e-08 34.2 0.1 1.8 2 0 0 2 2 2 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|452211348|ref|YP_007491462.1| - 1.3e-07 31.4 0.0 3e-07 30.2 0.0 1.6 2 0 0 2 2 2 1 MarR family B-block_TFIIIC PF04182.12 gi|452211348|ref|YP_007491462.1| - 0.0012 19.0 0.0 0.0026 17.9 0.0 1.7 1 1 0 1 1 1 1 B-block binding subunit of TFIIIC HTH_34 PF13601.6 gi|452211348|ref|YP_007491462.1| - 0.0016 18.6 0.1 0.0033 17.6 0.1 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_45 PF14947.6 gi|452211348|ref|YP_007491462.1| - 0.005 16.8 0.8 0.0086 16.0 0.3 1.7 2 0 0 2 2 2 1 Winged helix-turn-helix FtsK_gamma PF09397.10 gi|452211348|ref|YP_007491462.1| - 0.023 14.5 0.0 0.054 13.3 0.0 1.6 1 0 0 1 1 1 0 Ftsk gamma domain HxlR PF01638.17 gi|452211348|ref|YP_007491462.1| - 0.026 14.4 0.1 0.062 13.2 0.0 1.7 1 1 0 1 1 1 0 HxlR-like helix-turn-helix HTH_IclR PF09339.10 gi|452211348|ref|YP_007491462.1| - 0.053 13.3 0.0 0.14 11.9 0.0 1.7 1 0 0 1 1 1 0 IclR helix-turn-helix domain TrmB PF01978.19 gi|452211348|ref|YP_007491462.1| - 0.053 13.4 0.0 0.19 11.7 0.0 1.9 1 1 1 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_54 PF18607.1 gi|452211348|ref|YP_007491462.1| - 0.066 13.3 0.1 0.32 11.1 0.0 2.0 2 1 0 2 2 2 0 ParA helix turn helix domain HTH_Crp_2 PF13545.6 gi|452211348|ref|YP_007491462.1| - 0.071 13.1 0.5 0.19 11.8 0.0 2.1 3 0 0 3 3 3 0 Crp-like helix-turn-helix domain PAP_central PF04928.17 gi|452211348|ref|YP_007491462.1| - 0.09 11.7 0.1 0.11 11.4 0.1 1.1 1 0 0 1 1 1 0 Poly(A) polymerase central domain TrmB PF01978.19 gi|452211349|ref|YP_007491463.1| - 3e-24 84.7 0.0 4.1e-24 84.2 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|452211349|ref|YP_007491463.1| - 1.9e-06 27.5 0.0 4.6e-06 26.3 0.0 1.6 2 0 0 2 2 2 1 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|452211349|ref|YP_007491463.1| - 0.0019 18.1 0.0 0.003 17.4 0.0 1.3 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|452211349|ref|YP_007491463.1| - 0.0034 17.3 0.0 0.0061 16.5 0.0 1.4 1 0 0 1 1 1 1 MarR family Rrf2 PF02082.20 gi|452211349|ref|YP_007491463.1| - 0.0035 17.6 0.1 0.007 16.7 0.0 1.4 2 0 0 2 2 1 1 Transcriptional regulator HTH_5 PF01022.20 gi|452211349|ref|YP_007491463.1| - 0.0066 16.3 0.0 0.013 15.4 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family PadR PF03551.14 gi|452211349|ref|YP_007491463.1| - 0.033 14.2 0.1 3.7 7.6 0.0 2.2 1 1 1 2 2 2 0 Transcriptional regulator PadR-like family HTH_24 PF13412.6 gi|452211349|ref|YP_007491463.1| - 0.046 13.3 0.0 0.095 12.3 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding LexA_DNA_bind PF01726.16 gi|452211349|ref|YP_007491463.1| - 0.054 13.3 0.0 0.1 12.4 0.0 1.5 1 0 0 1 1 1 0 LexA DNA binding domain HTH_34 PF13601.6 gi|452211349|ref|YP_007491463.1| - 0.13 12.5 0.0 0.19 11.9 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_20 PF12840.7 gi|452211349|ref|YP_007491463.1| - 0.14 12.3 0.0 0.21 11.7 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Penicillinase_R PF03965.16 gi|452211349|ref|YP_007491463.1| - 0.14 12.5 0.0 0.18 12.1 0.0 1.2 1 0 0 1 1 1 0 Penicillinase repressor AI-2E_transport PF01594.16 gi|452211350|ref|YP_007491464.1| - 5.6e-44 150.6 22.3 6.8e-44 150.3 22.3 1.0 1 0 0 1 1 1 1 AI-2E family transporter DUF3488 PF11992.8 gi|452211350|ref|YP_007491464.1| - 1.4 7.8 4.7 3.1 6.6 4.7 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) ABC_tran PF00005.27 gi|452211351|ref|YP_007491465.1| - 2.8e-25 89.4 0.0 3.8e-25 89.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|452211351|ref|YP_007491465.1| - 2.3e-09 37.5 0.5 7.1e-05 22.7 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|452211351|ref|YP_007491465.1| - 1.4e-05 25.0 0.8 0.01 15.6 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain AAA_23 PF13476.6 gi|452211351|ref|YP_007491465.1| - 0.00069 20.2 0.3 0.0016 19.0 0.3 1.5 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|452211351|ref|YP_007491465.1| - 0.0068 15.9 0.2 0.67 9.4 0.1 2.2 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|452211351|ref|YP_007491465.1| - 0.021 14.6 0.3 0.037 13.8 0.3 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA PF00004.29 gi|452211351|ref|YP_007491465.1| - 0.03 14.8 0.0 0.052 14.0 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_13 PF13166.6 gi|452211351|ref|YP_007491465.1| - 0.048 12.3 0.7 3.7 6.1 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 gi|452211351|ref|YP_007491465.1| - 0.05 13.3 0.1 0.091 12.5 0.0 1.4 2 0 0 2 2 2 0 AAA domain Mg_chelatase PF01078.21 gi|452211351|ref|YP_007491465.1| - 0.052 12.9 0.1 0.076 12.4 0.1 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_16 PF13191.6 gi|452211351|ref|YP_007491465.1| - 0.064 13.6 0.1 0.16 12.3 0.1 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_14 PF13173.6 gi|452211351|ref|YP_007491465.1| - 0.12 12.4 0.2 6.1 6.9 0.1 2.2 1 1 1 2 2 2 0 AAA domain AAA_22 PF13401.6 gi|452211351|ref|YP_007491465.1| - 0.14 12.4 0.0 0.25 11.6 0.0 1.5 1 1 0 1 1 1 0 AAA domain KAP_NTPase PF07693.14 gi|452211351|ref|YP_007491465.1| - 0.19 10.9 0.0 0.19 10.9 0.0 1.1 1 0 0 1 1 1 0 KAP family P-loop domain Ion_trans_2 PF07885.16 gi|452211354|ref|YP_007491468.1| - 1.4e-23 82.6 10.8 1.8e-23 82.3 10.8 1.1 1 0 0 1 1 1 1 Ion channel Ion_trans PF00520.31 gi|452211354|ref|YP_007491468.1| - 0.00064 19.0 1.0 0.00097 18.4 1.0 1.4 1 0 0 1 1 1 1 Ion transport protein Lig_chan PF00060.26 gi|452211354|ref|YP_007491468.1| - 0.025 14.4 0.0 0.03 14.2 0.0 1.2 1 0 0 1 1 1 0 Ligand-gated ion channel ABC_membrane PF00664.23 gi|452211354|ref|YP_007491468.1| - 0.034 13.8 0.0 0.054 13.1 0.0 1.4 1 1 0 1 1 1 0 ABC transporter transmembrane region DUF3139 PF11337.8 gi|452211354|ref|YP_007491468.1| - 0.064 13.9 0.2 0.12 13.1 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3139) DUF2099 PF09872.9 gi|452211357|ref|YP_007491471.1| - 1.9e-110 368.1 2.5 2.2e-110 367.9 2.5 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2099) Sacchrp_dh_NADP PF03435.18 gi|452211357|ref|YP_007491471.1| - 0.025 14.8 0.3 0.044 14.0 0.3 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain MTH865 PF07747.11 gi|452211358|ref|YP_007491472.1| - 2.2e-29 101.0 0.0 2.5e-29 100.9 0.0 1.0 1 0 0 1 1 1 1 MTH865-like family HTH_20 PF12840.7 gi|452211360|ref|YP_007491474.1| - 9.3e-06 25.6 0.3 3.3e-05 23.8 0.1 2.1 2 1 0 2 2 2 1 Helix-turn-helix domain HTH_45 PF14947.6 gi|452211360|ref|YP_007491474.1| - 0.0003 20.7 2.6 0.00033 20.6 0.2 2.4 2 1 0 2 2 2 1 Winged helix-turn-helix HTH_5 PF01022.20 gi|452211360|ref|YP_007491474.1| - 0.001 18.9 0.0 0.0037 17.1 0.0 1.9 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_12 PF08461.10 gi|452211360|ref|YP_007491474.1| - 0.045 13.7 0.7 0.28 11.1 0.2 2.4 2 0 0 2 2 2 0 Ribonuclease R winged-helix domain Ubiq_cyt_C_chap PF03981.12 gi|452211360|ref|YP_007491474.1| - 0.068 13.3 0.1 0.13 12.4 0.1 1.5 1 0 0 1 1 1 0 Ubiquinol-cytochrome C chaperone Mrr_N PF14338.6 gi|452211360|ref|YP_007491474.1| - 0.073 13.2 0.2 0.27 11.4 0.0 2.1 2 0 0 2 2 2 0 Mrr N-terminal domain DUF2099 PF09872.9 gi|452211362|ref|YP_007491476.1| - 1.1e-115 385.3 0.9 1.2e-115 385.1 0.9 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2099) Usp PF00582.26 gi|452211362|ref|YP_007491476.1| - 0.033 14.7 0.3 0.057 13.9 0.3 1.4 1 0 0 1 1 1 0 Universal stress protein family Beta_helix PF13229.6 gi|452211364|ref|YP_007491478.1| - 1.2e-11 44.8 20.4 1.7e-10 41.0 17.3 2.2 1 1 1 2 2 2 2 Right handed beta helix region Glyco_hydro_28 PF00295.17 gi|452211364|ref|YP_007491478.1| - 2.4e-05 23.6 2.2 5.1e-05 22.5 2.2 1.6 1 0 0 1 1 1 1 Glycosyl hydrolases family 28 TPR_7 PF13176.6 gi|452211365|ref|YP_007491479.1| - 0.032 14.3 0.1 0.032 14.3 0.1 1.4 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_1 PF00515.28 gi|452211365|ref|YP_007491479.1| - 0.037 13.9 0.1 0.048 13.5 0.1 1.2 1 0 0 1 1 1 0 Tetratricopeptide repeat AMP-binding_C_2 PF14535.6 gi|452211369|ref|YP_007491483.1| - 5.8e-29 100.2 0.4 1.3e-28 99.2 0.4 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 gi|452211369|ref|YP_007491483.1| - 5.6e-16 58.2 0.0 2.1e-15 56.3 0.0 1.8 1 1 0 1 1 1 1 AMP-binding enzyme NnrU PF07298.11 gi|452211371|ref|YP_007491485.1| - 1.2e-07 31.4 3.8 2.1e-07 30.7 3.8 1.3 1 1 0 1 1 1 1 NnrU protein PEMT PF04191.13 gi|452211371|ref|YP_007491485.1| - 0.0025 18.2 0.1 0.0046 17.3 0.1 1.6 1 0 0 1 1 1 1 Phospholipid methyltransferase Peptidase_S55 PF05580.12 gi|452211372|ref|YP_007491486.1| - 0.15 12.0 0.2 0.34 10.8 0.1 1.6 2 0 0 2 2 2 0 SpoIVB peptidase S55 DUF1294 PF06961.13 gi|452211373|ref|YP_007491487.1| - 4.1e-22 78.2 0.1 5.7e-22 77.7 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1294) Wzy_C_2 PF11846.8 gi|452211373|ref|YP_007491487.1| - 0.015 15.2 0.2 0.022 14.7 0.1 1.3 1 1 0 1 1 1 0 Virulence factor membrane-bound polymerase, C-terminal Rubrerythrin PF02915.17 gi|452211374|ref|YP_007491488.1| - 2.1e-07 31.4 1.9 2.6e-07 31.1 1.9 1.1 1 0 0 1 1 1 1 Rubrerythrin DUF2383 PF09537.10 gi|452211374|ref|YP_007491488.1| - 0.00052 20.3 0.6 0.00066 20.0 0.6 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF2383) DUF4142 PF13628.6 gi|452211374|ref|YP_007491488.1| - 0.00065 20.0 0.3 0.00089 19.5 0.0 1.3 2 0 0 2 2 2 1 Domain of unknown function (DUF4142) COQ7 PF03232.13 gi|452211374|ref|YP_007491488.1| - 0.00073 19.3 0.2 0.00088 19.1 0.2 1.1 1 0 0 1 1 1 1 Ubiquinone biosynthesis protein COQ7 DUF2202 PF09968.9 gi|452211374|ref|YP_007491488.1| - 0.012 15.5 0.8 0.019 14.8 0.8 1.5 1 1 0 1 1 1 0 Uncharacterized protein domain (DUF2202) GSDH PF07995.11 gi|452211375|ref|YP_007491489.1| - 2.7e-20 72.9 0.0 1.1e-19 71.0 0.0 2.0 2 1 0 2 2 2 1 Glucose / Sorbosone dehydrogenase NHL PF01436.21 gi|452211375|ref|YP_007491489.1| - 0.00026 20.9 0.2 1.2 9.3 0.0 3.3 3 0 0 3 3 3 2 NHL repeat SGL PF08450.12 gi|452211375|ref|YP_007491489.1| - 0.0022 17.6 0.0 0.014 15.0 0.0 2.2 2 1 0 2 2 2 1 SMP-30/Gluconolactonase/LRE-like region ATP-synt_10 PF05176.14 gi|452211376|ref|YP_007491490.1| - 2.2e-09 37.0 0.0 2.5e-09 36.8 0.0 1.0 1 0 0 1 1 1 1 ATP10 protein IMS PF00817.20 gi|452211379|ref|YP_007491493.1| - 6.1e-44 149.6 0.0 9e-44 149.1 0.0 1.3 1 0 0 1 1 1 1 impB/mucB/samB family IMS_C PF11799.8 gi|452211379|ref|YP_007491493.1| - 4.3e-16 59.7 0.5 8e-16 58.8 0.5 1.4 1 0 0 1 1 1 1 impB/mucB/samB family C-terminal domain IMS_HHH PF11798.8 gi|452211379|ref|YP_007491493.1| - 2.3e-10 40.2 0.0 6.5e-10 38.8 0.0 1.9 1 0 0 1 1 1 1 IMS family HHH motif HHH_5 PF14520.6 gi|452211379|ref|YP_007491493.1| - 0.0001 22.8 0.0 0.00058 20.4 0.0 2.3 2 0 0 2 2 2 1 Helix-hairpin-helix domain Cdd1 PF11731.8 gi|452211379|ref|YP_007491493.1| - 0.00023 21.4 0.0 0.0005 20.3 0.0 1.5 1 0 0 1 1 1 1 Pathogenicity locus DUF4332 PF14229.6 gi|452211379|ref|YP_007491493.1| - 0.0072 16.6 0.0 0.014 15.6 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4332) DUF1805 PF08827.11 gi|452211379|ref|YP_007491493.1| - 0.027 14.8 0.0 21 5.5 0.0 3.3 3 0 0 3 3 3 0 Domain of unknown function (DUF1805) AI-2E_transport PF01594.16 gi|452211380|ref|YP_007491494.1| - 3.6e-39 134.8 48.3 4.2e-39 134.6 48.3 1.0 1 0 0 1 1 1 1 AI-2E family transporter SDH_sah PF01972.16 gi|452211381|ref|YP_007491495.1| - 3.9e-75 252.5 0.4 4.3e-75 252.4 0.4 1.0 1 0 0 1 1 1 1 Serine dehydrogenase proteinase CLP_protease PF00574.23 gi|452211381|ref|YP_007491495.1| - 0.00035 20.5 0.0 0.0021 18.0 0.0 2.0 2 0 0 2 2 2 1 Clp protease Peptidase_S49 PF01343.18 gi|452211381|ref|YP_007491495.1| - 0.00091 19.2 0.0 0.0019 18.1 0.0 1.5 1 0 0 1 1 1 1 Peptidase family S49 ECH_1 PF00378.20 gi|452211381|ref|YP_007491495.1| - 0.026 13.9 0.0 0.87 8.8 0.0 2.1 2 0 0 2 2 2 0 Enoyl-CoA hydratase/isomerase TPR_12 PF13424.6 gi|452211382|ref|YP_007491496.1| - 1.3e-77 256.1 18.1 2.4e-23 82.2 0.7 5.3 3 2 1 5 5 5 5 Tetratricopeptide repeat TPR_10 PF13374.6 gi|452211382|ref|YP_007491496.1| - 8.7e-72 235.3 9.4 3.9e-12 45.6 0.0 7.7 8 0 0 8 8 8 7 Tetratricopeptide repeat TPR_1 PF00515.28 gi|452211382|ref|YP_007491496.1| - 1.6e-46 154.2 14.0 1.1e-07 31.4 0.2 8.2 8 0 0 8 8 8 7 Tetratricopeptide repeat TPR_7 PF13176.6 gi|452211382|ref|YP_007491496.1| - 9.7e-43 141.1 16.3 8.9e-08 31.7 0.0 8.3 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_2 PF07719.17 gi|452211382|ref|YP_007491496.1| - 2.1e-37 124.2 15.0 3e-05 23.8 0.1 8.2 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_8 PF13181.6 gi|452211382|ref|YP_007491496.1| - 4.7e-31 104.4 18.8 0.00026 21.0 0.2 8.1 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_16 PF13432.6 gi|452211382|ref|YP_007491496.1| - 1.8e-15 57.3 2.2 0.00079 20.0 0.1 6.4 3 3 2 5 5 5 3 Tetratricopeptide repeat TPR_11 PF13414.6 gi|452211382|ref|YP_007491496.1| - 5.1e-15 54.9 13.4 0.0059 16.3 0.1 7.8 7 1 1 8 8 8 3 TPR repeat TPR_MalT PF17874.1 gi|452211382|ref|YP_007491496.1| - 2.4e-14 53.5 1.6 8.8e-07 28.6 1.1 3.0 2 1 1 3 3 3 2 MalT-like TPR region TPR_14 PF13428.6 gi|452211382|ref|YP_007491496.1| - 5.4e-13 48.6 4.1 0.7 10.9 0.1 7.3 5 3 2 8 8 7 3 Tetratricopeptide repeat SNAP PF14938.6 gi|452211382|ref|YP_007491496.1| - 2.6e-12 46.7 0.0 0.00012 21.6 0.0 3.2 2 1 1 3 3 3 3 Soluble NSF attachment protein, SNAP TPR_17 PF13431.6 gi|452211382|ref|YP_007491496.1| - 3.5e-12 45.8 9.9 0.072 13.5 0.0 8.1 8 4 0 8 8 6 2 Tetratricopeptide repeat TPR_19 PF14559.6 gi|452211382|ref|YP_007491496.1| - 6.5e-11 42.6 7.4 0.08 13.5 0.0 5.7 1 1 4 6 6 6 3 Tetratricopeptide repeat MIT PF04212.18 gi|452211382|ref|YP_007491496.1| - 4.3e-09 36.3 14.7 0.052 13.6 0.1 6.9 5 2 2 7 7 7 1 MIT (microtubule interacting and transport) domain 14-3-3 PF00244.20 gi|452211382|ref|YP_007491496.1| - 2.4e-08 33.8 2.3 0.074 12.5 0.0 4.1 2 1 2 4 4 4 2 14-3-3 protein TPR_6 PF13174.6 gi|452211382|ref|YP_007491496.1| - 1.6e-07 31.5 11.9 3.8 8.3 0.0 7.2 7 2 0 7 7 7 1 Tetratricopeptide repeat SHNi-TPR PF10516.9 gi|452211382|ref|YP_007491496.1| - 3e-06 26.6 4.6 4.2 6.9 0.0 6.7 7 0 0 7 7 7 1 SHNi-TPR DUF2225 PF09986.9 gi|452211382|ref|YP_007491496.1| - 9.6e-06 25.5 6.5 0.014 15.1 0.1 3.7 1 1 3 4 4 4 1 Uncharacterized protein conserved in bacteria (DUF2225) TPR_5 PF12688.7 gi|452211382|ref|YP_007491496.1| - 1.2e-05 25.5 3.0 0.53 10.5 0.1 4.3 4 2 0 4 4 4 2 Tetratrico peptide repeat RPN7 PF10602.9 gi|452211382|ref|YP_007491496.1| - 3.1e-05 23.8 4.5 1.4 8.6 0.0 4.8 1 1 3 5 5 5 1 26S proteasome subunit RPN7 PPR PF01535.20 gi|452211382|ref|YP_007491496.1| - 4.5e-05 23.4 11.5 1.5 9.2 0.0 7.8 9 0 0 9 9 8 1 PPR repeat TPR_3 PF07720.12 gi|452211382|ref|YP_007491496.1| - 0.00026 20.9 2.0 15 5.7 0.0 4.9 5 0 0 5 5 5 0 Tetratricopeptide repeat DUF5113 PF17140.4 gi|452211382|ref|YP_007491496.1| - 0.00057 19.7 3.1 16 5.3 0.0 4.9 3 1 2 5 5 5 0 Domain of unknown function (DUF5113) ANAPC3 PF12895.7 gi|452211382|ref|YP_007491496.1| - 0.0007 19.8 7.2 2.8 8.2 0.2 4.9 2 2 3 5 5 4 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_21 PF09976.9 gi|452211382|ref|YP_007491496.1| - 0.00081 19.1 0.9 1.8 8.3 0.1 3.9 2 1 2 4 4 4 1 Tetratricopeptide repeat-like domain DUF4404 PF14357.6 gi|452211382|ref|YP_007491496.1| - 0.0015 19.1 0.3 8.5 7.1 0.0 4.3 5 1 1 6 6 3 0 Domain of unknown function (DUF4404) TPR_9 PF13371.6 gi|452211382|ref|YP_007491496.1| - 0.0025 17.9 0.3 4.8 7.4 0.0 4.0 3 1 1 4 4 4 0 Tetratricopeptide repeat TAtT PF16811.5 gi|452211382|ref|YP_007491496.1| - 0.0029 16.9 3.7 2.6 7.3 0.1 5.0 2 1 3 5 5 5 1 TRAP transporter T-component TPR_15 PF13429.6 gi|452211382|ref|YP_007491496.1| - 0.0041 16.4 2.0 0.48 9.6 0.5 3.6 4 1 0 4 4 4 1 Tetratricopeptide repeat RNA_pol_Rpb6 PF01192.22 gi|452211382|ref|YP_007491496.1| - 0.0041 17.0 1.9 0.076 13.0 0.0 3.4 3 1 0 3 3 2 1 RNA polymerase Rpb6 HHH_8 PF14716.6 gi|452211382|ref|YP_007491496.1| - 0.0088 16.4 2.4 22 5.5 0.0 5.1 5 1 1 6 6 5 0 Helix-hairpin-helix domain Vps39_1 PF10366.9 gi|452211382|ref|YP_007491496.1| - 0.009 16.3 8.1 0.37 11.1 0.1 4.7 3 1 2 5 5 4 1 Vacuolar sorting protein 39 domain 1 EzrA PF06160.12 gi|452211382|ref|YP_007491496.1| - 0.014 13.6 0.1 3 5.9 0.0 3.0 3 0 0 3 3 3 0 Septation ring formation regulator, EzrA RPN6_N PF18055.1 gi|452211382|ref|YP_007491496.1| - 0.019 15.4 2.8 0.61 10.5 0.6 2.9 1 1 0 2 2 2 0 26S proteasome regulatory subunit RPN6 N-terminal domain ComR_TPR PF18710.1 gi|452211382|ref|YP_007491496.1| - 0.022 14.3 0.1 0.17 11.4 0.1 2.3 3 0 0 3 3 2 0 ComR tetratricopeptide TPR_20 PF14561.6 gi|452211382|ref|YP_007491496.1| - 0.027 14.8 0.3 16 5.9 0.1 3.5 2 1 0 3 3 2 0 Tetratricopeptide repeat EspB_PE PF18625.1 gi|452211382|ref|YP_007491496.1| - 0.044 14.2 0.2 13 6.4 0.0 3.0 2 1 1 3 3 2 0 ESX-1 secreted protein B PE domain SRP68 PF16969.5 gi|452211382|ref|YP_007491496.1| - 0.058 12.4 0.5 3.9 6.3 0.0 2.9 2 1 1 3 3 3 0 RNA-binding signal recognition particle 68 Arm_3 PF16186.5 gi|452211382|ref|YP_007491496.1| - 0.083 12.5 1.1 4 7.1 0.1 3.7 4 0 0 4 4 4 0 Atypical Arm repeat HDOD PF08668.12 gi|452211382|ref|YP_007491496.1| - 0.22 11.0 0.3 1.9 7.9 0.1 2.6 3 1 1 4 4 4 0 HDOD domain SPO22 PF08631.10 gi|452211382|ref|YP_007491496.1| - 0.23 10.9 2.9 9.8 5.6 0.1 2.9 1 1 2 3 3 3 0 Meiosis protein SPO22/ZIP4 like Response_reg PF00072.24 gi|452211384|ref|YP_007491498.1| - 1.6e-30 105.5 0.1 1.8e-30 105.4 0.1 1.0 1 0 0 1 1 1 1 Response regulator receiver domain Response_reg PF00072.24 gi|452211385|ref|YP_007491499.1| - 4.8e-40 136.2 3.6 3.9e-19 68.9 1.3 2.5 2 0 0 2 2 2 2 Response regulator receiver domain HATPase_c PF02518.26 gi|452211385|ref|YP_007491499.1| - 3.1e-30 105.0 0.2 7.5e-30 103.7 0.2 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|452211385|ref|YP_007491499.1| - 1.8e-18 66.3 0.4 8.3e-18 64.2 0.0 2.3 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_9 PF13426.7 gi|452211385|ref|YP_007491499.1| - 4.2e-13 49.5 0.0 1.4e-06 28.5 0.0 3.0 2 0 0 2 2 2 2 PAS domain PAS_8 PF13188.7 gi|452211385|ref|YP_007491499.1| - 1.8e-07 31.0 0.0 0.0016 18.4 0.0 2.9 2 0 0 2 2 2 2 PAS domain PAS_3 PF08447.12 gi|452211385|ref|YP_007491499.1| - 1.8e-05 24.9 0.0 0.001 19.3 0.0 2.7 2 0 0 2 2 2 1 PAS fold PAS PF00989.25 gi|452211385|ref|YP_007491499.1| - 1.9e-05 24.6 0.0 0.021 14.8 0.0 3.2 2 1 0 2 2 2 2 PAS fold HATPase_c_3 PF13589.6 gi|452211385|ref|YP_007491499.1| - 0.018 14.9 0.0 0.039 13.8 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TaqI_C PF12950.7 gi|452211386|ref|YP_007491500.1| - 0.0017 18.5 0.7 0.0047 17.0 0.7 1.8 1 0 0 1 1 1 1 TaqI-like C-terminal specificity domain DUF72 PF01904.18 gi|452211387|ref|YP_007491501.1| - 1.5e-22 80.8 0.4 2.1e-18 67.2 0.1 2.0 1 1 1 2 2 2 2 Protein of unknown function DUF72 CHB_HEX_C PF03174.13 gi|452211387|ref|YP_007491501.1| - 0.046 13.7 0.0 1.2 9.2 0.0 2.2 2 0 0 2 2 2 0 Chitobiase/beta-hexosaminidase C-terminal domain SmpA_OmlA PF04355.13 gi|452211387|ref|YP_007491501.1| - 0.59 10.0 2.8 0.59 10.0 0.2 2.0 2 0 0 2 2 2 0 SmpA / OmlA family Peptidase_M23 PF01551.22 gi|452211390|ref|YP_007491504.1| - 7.7e-14 51.7 0.0 1.9e-13 50.4 0.0 1.6 1 1 0 1 1 1 1 Peptidase family M23 Gal-bind_lectin PF00337.22 gi|452211390|ref|YP_007491504.1| - 0.062 12.8 0.0 0.082 12.4 0.0 1.2 1 0 0 1 1 1 0 Galactoside-binding lectin HhH-GPD PF00730.25 gi|452211392|ref|YP_007491506.1| - 3.2e-17 62.9 0.0 4.4e-17 62.5 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 gi|452211392|ref|YP_007491506.1| - 2.6e-06 27.0 0.0 5.8e-06 25.9 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|452211392|ref|YP_007491506.1| - 0.0072 16.9 0.1 0.089 13.4 0.0 2.2 2 0 0 2 2 2 1 Helix-hairpin-helix domain RanGAP1_C PF07834.11 gi|452211392|ref|YP_007491506.1| - 0.058 13.0 0.0 0.084 12.5 0.0 1.3 1 0 0 1 1 1 0 RanGAP1 C-terminal domain HHH_2 PF12826.7 gi|452211392|ref|YP_007491506.1| - 0.075 13.1 0.0 0.15 12.2 0.0 1.4 1 0 0 1 1 1 0 Helix-hairpin-helix motif PsiE PF06146.12 gi|452211394|ref|YP_007491508.1| - 2.5e-11 43.8 5.6 2.5e-11 43.8 5.6 2.0 2 1 0 2 2 2 1 Phosphate-starvation-inducible E DUF3397 PF11877.8 gi|452211394|ref|YP_007491508.1| - 0.21 11.8 10.5 0.044 14.0 2.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3397) Phage_Coat_Gp8 PF05371.12 gi|452211394|ref|YP_007491508.1| - 0.28 11.0 1.0 0.96 9.3 0.3 2.2 2 0 0 2 2 2 0 Phage major coat protein, Gp8 DUF3852 PF12963.7 gi|452211394|ref|YP_007491508.1| - 8.4 6.8 10.5 0.44 10.9 0.6 2.7 1 1 0 2 2 2 0 Protein of unknown function (DUF3852) MacB_PCD PF12704.7 gi|452211396|ref|YP_007491510.1| - 3.7e-29 102.5 0.2 3.7e-29 102.5 0.2 3.1 3 0 0 3 3 3 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|452211396|ref|YP_007491510.1| - 1.3e-13 51.2 8.1 1.3e-13 51.2 8.1 3.0 3 0 0 3 3 3 1 FtsX-like permease family DUF4118 PF13493.6 gi|452211396|ref|YP_007491510.1| - 4.9 7.0 11.7 0.97 9.3 7.2 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4118) NPCBM_assoc PF10633.9 gi|452211397|ref|YP_007491511.1| - 6.3e-10 39.2 0.0 0.00082 19.6 0.0 4.1 4 1 0 4 4 4 2 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.11 gi|452211397|ref|YP_007491511.1| - 6.8e-09 35.9 4.9 0.044 14.0 0.1 4.3 1 1 2 4 4 4 3 CARDB DUF11 PF01345.18 gi|452211397|ref|YP_007491511.1| - 7.6e-06 26.2 0.1 0.14 12.5 0.0 3.8 4 0 0 4 4 4 2 Domain of unknown function DUF11 DUF2393 PF09624.10 gi|452211397|ref|YP_007491511.1| - 0.0085 16.1 2.5 1.3 9.1 0.0 3.7 3 2 1 4 4 4 2 Protein of unknown function (DUF2393) Y_Y_Y PF07495.13 gi|452211397|ref|YP_007491511.1| - 0.022 14.7 3.4 17 5.4 0.0 4.1 3 1 1 4 4 4 0 Y_Y_Y domain Grp7_allergen PF16984.5 gi|452211397|ref|YP_007491511.1| - 0.069 13.2 0.1 9.8 6.2 0.0 2.2 1 1 1 2 2 2 0 Group 7 allergen ABC_tran PF00005.27 gi|452211398|ref|YP_007491512.1| - 9.4e-32 110.4 0.2 1.7e-31 109.6 0.1 1.4 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 gi|452211398|ref|YP_007491512.1| - 7.9e-06 25.5 0.8 0.042 13.3 0.1 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|452211398|ref|YP_007491512.1| - 2.9e-05 24.5 0.3 0.00013 22.4 0.3 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|452211398|ref|YP_007491512.1| - 0.00017 21.3 0.1 0.00035 20.3 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|452211398|ref|YP_007491512.1| - 0.0025 17.7 0.1 0.0069 16.3 0.1 1.7 2 0 0 2 2 2 1 RsgA GTPase AAA_21 PF13304.6 gi|452211398|ref|YP_007491512.1| - 0.0027 17.6 0.2 0.63 9.8 0.2 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_10 PF12846.7 gi|452211398|ref|YP_007491512.1| - 0.0031 16.5 0.1 0.24 10.3 0.1 2.2 1 1 1 2 2 2 1 AAA-like domain AAA_22 PF13401.6 gi|452211398|ref|YP_007491512.1| - 0.0054 17.0 0.8 0.059 13.6 0.1 2.1 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 gi|452211398|ref|YP_007491512.1| - 0.015 15.0 0.1 0.073 12.8 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 gi|452211398|ref|YP_007491512.1| - 0.029 14.9 0.6 0.076 13.5 0.0 1.9 2 1 0 2 2 2 0 AAA domain AAA_25 PF13481.6 gi|452211398|ref|YP_007491512.1| - 0.06 12.9 0.2 0.27 10.8 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_15 PF13175.6 gi|452211398|ref|YP_007491512.1| - 0.091 12.5 1.8 2.2 7.9 0.1 2.7 2 1 0 2 2 2 0 AAA ATPase domain AAA_18 PF13238.6 gi|452211398|ref|YP_007491512.1| - 0.18 12.3 0.4 0.53 10.8 0.4 1.9 1 1 0 1 1 1 0 AAA domain HTH_3 PF01381.22 gi|452211399|ref|YP_007491513.1| - 1.2e-13 50.9 0.0 1.3e-13 50.8 0.0 1.0 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|452211399|ref|YP_007491513.1| - 1.8e-08 34.6 0.0 2e-08 34.5 0.0 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|452211399|ref|YP_007491513.1| - 1.7e-07 31.1 0.0 2e-07 30.9 0.0 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|452211399|ref|YP_007491513.1| - 5e-05 23.7 0.0 5.8e-05 23.5 0.0 1.0 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_Crp_2 PF13545.6 gi|452211399|ref|YP_007491513.1| - 0.0042 17.0 0.0 0.0075 16.2 0.0 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_25 PF13413.6 gi|452211399|ref|YP_007491513.1| - 0.012 15.5 0.1 0.024 14.5 0.0 1.5 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_37 PF13744.6 gi|452211399|ref|YP_007491513.1| - 0.046 13.7 0.0 0.051 13.5 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain Phage_CI_repr PF07022.13 gi|452211399|ref|YP_007491513.1| - 0.069 13.3 0.0 0.084 13.0 0.0 1.1 1 0 0 1 1 1 0 Bacteriophage CI repressor helix-turn-helix domain 7TMR-DISM_7TM PF07695.11 gi|452211400|ref|YP_007491514.1| - 0.039 13.8 13.6 0.041 13.8 0.6 2.1 2 0 0 2 2 2 0 7TM diverse intracellular signalling DUF423 PF04241.15 gi|452211400|ref|YP_007491514.1| - 0.096 12.9 5.9 0.43 10.8 0.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF423) DUF3671 PF12420.8 gi|452211400|ref|YP_007491514.1| - 0.41 10.7 6.7 4.1 7.5 6.7 2.4 1 1 0 1 1 1 0 Protein of unknown function Phage_holin_5_2 PF16079.5 gi|452211400|ref|YP_007491514.1| - 0.49 10.8 5.0 1.8 9.0 4.9 2.2 1 1 0 1 1 1 0 Phage holin family Hol44, in holin superfamily V DUF4271 PF14093.6 gi|452211400|ref|YP_007491514.1| - 1.4 8.7 19.1 0.19 11.6 4.7 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4271) DUF3040 PF11239.8 gi|452211400|ref|YP_007491514.1| - 2.6 8.4 5.8 4.9 7.5 4.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3040) Orai-1 PF07856.12 gi|452211400|ref|YP_007491514.1| - 4 7.1 11.4 1.6 8.4 3.5 2.2 2 0 0 2 2 2 0 Mediator of CRAC channel activity Peptidase_A24 PF01478.18 gi|452211400|ref|YP_007491514.1| - 8.9 6.8 12.8 0.33 11.4 2.4 2.1 1 1 0 2 2 2 0 Type IV leader peptidase family Pirin PF02678.16 gi|452211401|ref|YP_007491515.1| - 2.8e-37 127.0 0.2 4.8e-37 126.2 0.2 1.4 1 0 0 1 1 1 1 Pirin Pirin_C PF05726.13 gi|452211401|ref|YP_007491515.1| - 5e-34 116.8 0.0 8e-33 112.9 0.0 2.1 2 0 0 2 2 2 1 Pirin C-terminal cupin domain Cupin_2 PF07883.11 gi|452211401|ref|YP_007491515.1| - 1.6e-05 24.5 4.3 0.012 15.3 0.4 3.5 2 1 1 3 3 3 2 Cupin domain AraC_binding PF02311.19 gi|452211401|ref|YP_007491515.1| - 0.022 14.7 2.1 4.2 7.3 0.2 3.0 2 1 0 2 2 2 0 AraC-like ligand binding domain Cupin_3 PF05899.12 gi|452211401|ref|YP_007491515.1| - 0.12 12.1 0.5 7.8 6.3 0.0 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF861) DDE_Tnp_1 PF01609.21 gi|452211402|ref|YP_007491516.1| - 3.4e-10 39.9 0.9 4.9e-10 39.4 0.9 1.2 1 0 0 1 1 1 1 Transposase DDE domain YqzH PF14164.6 gi|452211402|ref|YP_007491516.1| - 0.011 15.7 0.0 2.5 8.2 0.0 2.7 2 0 0 2 2 2 0 YqzH-like protein DDE_Tnp_1_6 PF13751.6 gi|452211402|ref|YP_007491516.1| - 0.039 14.2 0.1 0.079 13.2 0.1 1.4 1 0 0 1 1 1 0 Transposase DDE domain HMG_box PF00505.19 gi|452211404|ref|YP_007491518.1| - 0.19 12.2 1.1 6.6 7.2 0.4 2.6 2 0 0 2 2 2 0 HMG (high mobility group) box LMBR1 PF04791.16 gi|452211404|ref|YP_007491518.1| - 0.23 10.3 0.0 0.3 10.0 0.0 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein DDE_3 PF13358.6 gi|452211405|ref|YP_007491519.1| - 1.6e-26 92.9 0.0 1.9e-26 92.5 0.0 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease Pirin PF02678.16 gi|452211406|ref|YP_007491520.1| - 2.5e-36 123.9 0.4 4.7e-36 123.0 0.2 1.5 2 0 0 2 2 2 1 Pirin Pirin_C PF05726.13 gi|452211406|ref|YP_007491520.1| - 2.8e-34 117.6 0.0 8e-33 112.9 0.0 2.4 2 1 0 2 2 2 1 Pirin C-terminal cupin domain Cupin_2 PF07883.11 gi|452211406|ref|YP_007491520.1| - 0.0014 18.3 3.0 0.031 14.0 0.2 3.1 3 0 0 3 3 3 1 Cupin domain Cupin_3 PF05899.12 gi|452211406|ref|YP_007491520.1| - 0.088 12.5 0.5 7.6 6.3 0.0 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF861) RNA_POL_M_15KD PF02150.16 gi|452211408|ref|YP_007491522.1| - 2.6e-05 24.0 0.7 3e-05 23.8 0.7 1.1 1 0 0 1 1 1 1 RNA polymerases M/15 Kd subunit DZR PF12773.7 gi|452211408|ref|YP_007491522.1| - 0.012 15.6 0.8 0.015 15.3 0.8 1.2 1 0 0 1 1 1 0 Double zinc ribbon ADK_lid PF05191.14 gi|452211408|ref|YP_007491522.1| - 0.014 15.4 1.3 0.17 11.9 0.1 2.1 2 0 0 2 2 2 0 Adenylate kinase, active site lid zf-TFIIB PF13453.6 gi|452211408|ref|YP_007491522.1| - 0.045 13.1 3.2 0.091 12.1 3.2 1.5 1 1 0 1 1 1 0 Transcription factor zinc-finger RecR PF02132.15 gi|452211408|ref|YP_007491522.1| - 0.049 13.2 1.3 3.5 7.3 0.0 2.1 2 0 0 2 2 2 0 RecR protein DUF2121 PF09894.9 gi|452211410|ref|YP_007491524.1| - 5.9e-69 231.6 5.4 6.5e-69 231.4 5.4 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2121) Proteasome PF00227.26 gi|452211410|ref|YP_007491524.1| - 0.0012 18.4 0.1 0.081 12.4 0.0 2.4 2 0 0 2 2 2 2 Proteasome subunit Adenine_deam_C PF13382.6 gi|452211411|ref|YP_007491525.1| - 4.1e-59 198.7 0.0 7.1e-59 197.9 0.0 1.4 1 0 0 1 1 1 1 Adenine deaminase C-terminal domain Amidohydro_1 PF01979.20 gi|452211411|ref|YP_007491525.1| - 1.5e-31 110.0 0.0 3.6e-30 105.4 0.0 2.1 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|452211411|ref|YP_007491525.1| - 6.6e-05 22.6 0.0 0.049 13.1 0.0 2.2 2 0 0 2 2 2 2 Amidohydrolase family DUF5567 PF17722.1 gi|452211411|ref|YP_007491525.1| - 0.13 12.2 0.0 0.21 11.4 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5567) Aminotran_5 PF00266.19 gi|452211412|ref|YP_007491526.1| - 9.2e-07 28.1 0.0 2.2e-06 26.9 0.0 1.4 1 1 1 2 2 2 1 Aminotransferase class-V HNH_3 PF13392.6 gi|452211412|ref|YP_007491526.1| - 0.09 12.6 0.0 0.25 11.1 0.0 1.7 1 0 0 1 1 1 0 HNH endonuclease SCRG1 PF15224.6 gi|452211413|ref|YP_007491527.1| - 0.072 13.2 0.9 0.094 12.8 0.5 1.4 1 1 0 1 1 1 0 Scrapie-responsive protein 1 Hydantoinase_B PF02538.14 gi|452211414|ref|YP_007491528.1| - 1.9e-207 689.8 0.0 2.8e-207 689.2 0.0 1.3 1 0 0 1 1 1 1 Hydantoinase B/oxoprolinase Hydant_A_N PF05378.13 gi|452211414|ref|YP_007491528.1| - 2.5e-62 209.7 0.0 8.6e-62 208.0 0.0 2.0 3 0 0 3 3 3 1 Hydantoinase/oxoprolinase N-terminal region Hydantoinase_A PF01968.18 gi|452211414|ref|YP_007491528.1| - 3e-49 167.8 0.6 3.9e-41 141.2 0.2 2.5 2 0 0 2 2 2 2 Hydantoinase/oxoprolinase DUF1297 PF06973.12 gi|452211415|ref|YP_007491529.1| - 4.9e-52 176.2 0.0 6.6e-52 175.8 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.12 gi|452211415|ref|YP_007491529.1| - 3.7e-40 136.7 0.0 7.9e-40 135.6 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) CPSase_L_D2 PF02786.17 gi|452211415|ref|YP_007491529.1| - 0.038 13.5 0.0 0.063 12.8 0.0 1.3 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain Big_5 PF13205.6 gi|452211416|ref|YP_007491530.1| - 6.9e-06 26.7 0.0 8.7e-06 26.4 0.0 1.2 1 0 0 1 1 1 1 Bacterial Ig-like domain HDOD PF08668.12 gi|452211417|ref|YP_007491531.1| - 0.0016 18.0 0.1 0.32 10.4 0.0 2.2 1 1 1 2 2 2 2 HDOD domain DUF1279 PF06916.13 gi|452211417|ref|YP_007491531.1| - 0.029 14.9 3.3 1.3 9.6 0.1 3.2 4 0 0 4 4 4 0 Protein of unknown function (DUF1279) COX14 PF14880.6 gi|452211417|ref|YP_007491531.1| - 0.54 10.1 4.3 0.14 12.0 0.8 1.8 2 0 0 2 2 2 0 Cytochrome oxidase c assembly Flavin_Reduct PF01613.18 gi|452211418|ref|YP_007491532.1| - 6.7e-26 91.2 0.0 8.2e-26 90.9 0.0 1.0 1 0 0 1 1 1 1 Flavin reductase like domain Aldo_ket_red PF00248.21 gi|452211420|ref|YP_007491534.1| - 8.4e-40 136.8 0.0 4.2e-38 131.2 0.0 2.1 1 1 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.6 gi|452211420|ref|YP_007491534.1| - 4.2e-13 49.6 7.1 8.9e-13 48.6 7.1 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452211420|ref|YP_007491534.1| - 3.6e-09 36.6 7.7 6.7e-09 35.8 7.7 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_20 PF14691.6 gi|452211420|ref|YP_007491534.1| - 1.1e-06 28.4 1.8 1.1e-05 25.2 0.1 2.2 2 0 0 2 2 2 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_18 PF13746.6 gi|452211420|ref|YP_007491534.1| - 2.2e-06 27.9 3.5 0.017 15.3 0.5 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|452211420|ref|YP_007491534.1| - 5.8e-05 23.1 6.4 0.035 14.2 0.5 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452211420|ref|YP_007491534.1| - 0.00027 21.8 3.5 0.012 16.5 0.4 2.5 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4 PF00037.27 gi|452211420|ref|YP_007491534.1| - 0.00062 19.5 11.1 0.0012 18.5 3.0 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_10 PF13237.6 gi|452211420|ref|YP_007491534.1| - 0.00062 19.8 10.2 0.0043 17.1 10.9 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|452211420|ref|YP_007491534.1| - 0.0025 18.2 8.7 0.0065 16.9 8.7 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain PA_decarbox PF05870.11 gi|452211420|ref|YP_007491534.1| - 0.0037 16.9 0.0 1.1 8.9 0.0 2.4 2 0 0 2 2 2 1 Phenolic acid decarboxylase (PAD) Fer4_22 PF17179.4 gi|452211420|ref|YP_007491534.1| - 0.0094 16.8 6.8 1.6 9.6 2.0 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|452211420|ref|YP_007491534.1| - 0.24 12.0 14.5 2.9 8.6 14.7 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|452211420|ref|YP_007491534.1| - 0.48 11.1 17.2 0.29 11.7 6.3 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_6 PF12837.7 gi|452211420|ref|YP_007491534.1| - 5.9 7.1 14.9 0.074 13.2 2.3 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.7 gi|452211420|ref|YP_007491534.1| - 7.7 6.8 16.7 0.55 10.4 3.7 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Aldo_ket_red PF00248.21 gi|452211421|ref|YP_007491535.1| - 4.1e-41 141.1 0.0 7.2e-40 137.0 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.6 gi|452211421|ref|YP_007491535.1| - 8.1e-12 45.5 7.7 1.6e-11 44.5 7.7 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452211421|ref|YP_007491535.1| - 5.6e-07 29.6 7.4 1.2e-06 28.6 7.4 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_20 PF14691.6 gi|452211421|ref|YP_007491535.1| - 3.6e-05 23.5 0.1 3.6e-05 23.5 0.1 1.8 2 0 0 2 2 2 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_10 PF13237.6 gi|452211421|ref|YP_007491535.1| - 0.00026 21.0 5.6 0.0031 17.6 0.3 2.4 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|452211421|ref|YP_007491535.1| - 0.00079 19.8 6.9 0.0018 18.7 6.9 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|452211421|ref|YP_007491535.1| - 0.00085 19.5 3.3 0.11 12.7 0.4 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|452211421|ref|YP_007491535.1| - 0.0013 18.9 6.3 0.45 10.7 1.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452211421|ref|YP_007491535.1| - 0.0062 17.4 5.2 0.07 14.1 0.5 2.5 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4 PF00037.27 gi|452211421|ref|YP_007491535.1| - 0.0066 16.2 10.0 0.012 15.3 1.8 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Med27 PF11571.8 gi|452211421|ref|YP_007491535.1| - 0.021 15.2 2.1 0.07 13.5 0.1 2.3 2 0 0 2 2 2 0 Mediator complex subunit 27 PA_decarbox PF05870.11 gi|452211421|ref|YP_007491535.1| - 0.13 11.8 0.1 0.33 10.6 0.1 1.6 1 0 0 1 1 1 0 Phenolic acid decarboxylase (PAD) Fer4_7 PF12838.7 gi|452211421|ref|YP_007491535.1| - 0.57 10.8 12.9 4.3 8.0 12.8 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|452211421|ref|YP_007491535.1| - 1.5 9.6 12.6 0.46 11.1 3.0 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.7 gi|452211421|ref|YP_007491535.1| - 2 8.7 13.5 0.59 10.3 2.3 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain AP3D1 PF06375.11 gi|452211422|ref|YP_007491536.1| - 0.59 10.4 7.3 0.67 10.2 7.3 1.1 1 0 0 1 1 1 0 AP-3 complex subunit delta-1 CMD PF02627.20 gi|452211423|ref|YP_007491537.1| - 4.8e-12 45.8 0.0 5.6e-12 45.5 0.0 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family SinI PF08671.10 gi|452211423|ref|YP_007491537.1| - 0.13 12.1 0.1 0.23 11.3 0.1 1.4 1 0 0 1 1 1 0 Anti-repressor SinI Acetyltransf_3 PF13302.7 gi|452211424|ref|YP_007491538.1| - 1.2e-17 64.9 0.0 1.4e-17 64.6 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|452211424|ref|YP_007491538.1| - 2.5e-09 37.4 0.0 2.9e-09 37.2 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|452211424|ref|YP_007491538.1| - 0.016 15.7 0.0 0.022 15.2 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|452211424|ref|YP_007491538.1| - 0.02 14.6 0.0 0.044 13.5 0.0 1.6 1 1 0 2 2 2 0 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|452211424|ref|YP_007491538.1| - 0.061 13.3 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 FR47-like protein CDP-OH_P_transf PF01066.21 gi|452211426|ref|YP_007491540.1| - 0.12 13.2 0.3 0.34 11.7 0.3 1.9 1 1 0 1 1 1 0 CDP-alcohol phosphatidyltransferase Lactonase PF10282.9 gi|452211427|ref|YP_007491541.1| - 1.3e-11 44.4 4.8 2.3e-06 27.1 0.4 3.7 1 1 1 2 2 2 2 Lactonase, 7-bladed beta-propeller PD40 PF07676.12 gi|452211427|ref|YP_007491541.1| - 3.3e-10 39.6 12.2 1.5 8.9 0.1 10.2 10 0 0 10 10 10 2 WD40-like Beta Propeller Repeat Cytochrom_D1 PF02239.16 gi|452211427|ref|YP_007491541.1| - 2.4e-09 36.2 7.6 0.00069 18.2 1.2 3.5 2 1 1 3 3 3 3 Cytochrome D1 heme domain NHL PF01436.21 gi|452211427|ref|YP_007491541.1| - 5.7e-08 32.4 12.8 2 8.6 0.0 7.3 7 0 0 7 7 7 4 NHL repeat SBP56 PF05694.11 gi|452211427|ref|YP_007491541.1| - 3.3e-06 26.2 0.3 1.3 7.8 0.0 4.9 1 1 3 5 5 5 3 56kDa selenium binding protein (SBP56) Arylesterase PF01731.20 gi|452211427|ref|YP_007491541.1| - 8.1e-05 22.7 7.4 24 5.2 0.0 5.9 5 1 1 6 6 6 1 Arylesterase PCC_BT PF18140.1 gi|452211427|ref|YP_007491541.1| - 1.7 9.0 4.7 12 6.2 0.4 3.4 2 2 0 2 2 2 0 Propionyl-coenzyme A carboxylase BT domain Virul_fac_BrkB PF03631.15 gi|452211429|ref|YP_007491543.1| - 1.4e-50 172.3 20.2 1.6e-50 172.1 20.2 1.0 1 0 0 1 1 1 1 Virulence factor BrkB Polysacc_synt PF01943.17 gi|452211432|ref|YP_007491546.1| - 1.5e-25 90.1 38.2 6.8e-25 88.0 21.5 2.4 3 0 0 3 3 3 2 Polysaccharide biosynthesis protein MatE PF01554.18 gi|452211432|ref|YP_007491546.1| - 9.6e-20 70.9 34.5 6.5e-14 51.9 13.0 3.1 3 0 0 3 3 3 2 MatE Polysacc_synt_3 PF13440.6 gi|452211432|ref|YP_007491546.1| - 8.6e-17 61.3 13.2 8.6e-17 61.3 13.2 2.1 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|452211432|ref|YP_007491546.1| - 1.8e-16 60.5 12.3 1.8e-16 60.5 12.3 3.7 3 2 1 4 4 4 2 Polysaccharide biosynthesis C-terminal domain MurJ PF03023.14 gi|452211432|ref|YP_007491546.1| - 5.8e-05 21.9 30.8 0.00011 20.9 30.8 1.5 1 0 0 1 1 1 1 Lipid II flippase MurJ E1-E2_ATPase PF00122.20 gi|452211432|ref|YP_007491546.1| - 2.4 7.7 10.9 0.052 13.1 0.5 2.9 3 0 0 3 3 3 0 E1-E2 ATPase DZR PF12773.7 gi|452211436|ref|YP_007491550.1| - 1.1e-09 38.1 12.1 1.1e-09 38.1 12.1 3.6 2 1 2 4 4 4 1 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|452211436|ref|YP_007491550.1| - 1.2e-09 37.5 26.4 6e-07 29.0 5.8 4.8 5 0 0 5 5 5 3 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|452211436|ref|YP_007491550.1| - 1.2e-08 34.1 33.7 2e-06 27.0 3.8 5.2 3 2 1 5 5 5 3 zinc-ribbon domain UPF0547 PF10571.9 gi|452211436|ref|YP_007491550.1| - 0.0001 22.3 1.7 0.0001 22.3 1.7 4.3 4 0 0 4 4 4 1 Uncharacterised protein family UPF0547 zinc_ribbon_15 PF17032.5 gi|452211436|ref|YP_007491550.1| - 0.019 15.7 1.1 0.019 15.7 1.1 4.2 3 1 1 4 4 4 0 zinc-ribbon family zf-NADH-PPase PF09297.11 gi|452211436|ref|YP_007491550.1| - 0.071 12.8 22.1 0.21 11.3 0.3 5.4 4 1 0 4 4 4 0 NADH pyrophosphatase zinc ribbon domain Nudix_N_2 PF14803.6 gi|452211436|ref|YP_007491550.1| - 0.21 11.5 23.6 0.92 9.5 0.2 5.6 5 0 0 5 5 5 0 Nudix N-terminal zinc-ribbons_6 PF07191.12 gi|452211436|ref|YP_007491550.1| - 0.37 10.8 22.6 7.9 6.5 3.6 4.1 2 1 1 3 3 3 0 zinc-ribbons PolC_DP2 PF03833.13 gi|452211436|ref|YP_007491550.1| - 0.47 8.3 11.1 0.025 12.4 5.7 1.5 1 1 1 2 2 2 0 DNA polymerase II large subunit DP2 tRNA-synt_1g PF09334.11 gi|452211436|ref|YP_007491550.1| - 1.1 7.9 7.0 3.5 6.3 4.4 2.4 1 1 1 2 2 2 0 tRNA synthetases class I (M) DUF1258 PF06869.12 gi|452211436|ref|YP_007491550.1| - 1.4 8.3 4.9 3.3 7.1 4.9 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1258) Ribosomal_L32p PF01783.23 gi|452211436|ref|YP_007491550.1| - 1.6 9.1 16.0 0.24 11.7 1.5 3.4 2 1 1 3 3 3 0 Ribosomal L32p protein family NRDD PF13597.6 gi|452211436|ref|YP_007491550.1| - 4.2 6.0 15.9 0.18 10.5 7.9 2.5 1 1 1 2 2 2 0 Anaerobic ribonucleoside-triphosphate reductase PHF5 PF03660.14 gi|452211436|ref|YP_007491550.1| - 5.5 7.2 16.7 0.19 11.9 4.4 2.8 2 1 1 3 3 3 0 PHF5-like protein Zn_Tnp_IS91 PF14319.6 gi|452211436|ref|YP_007491550.1| - 6.8 6.8 21.1 0.42 10.7 1.1 4.2 3 1 0 3 3 3 0 Transposase zinc-binding domain DUF1015 PF06245.11 gi|452211437|ref|YP_007491551.1| - 7.9e-75 252.2 0.0 9.9e-75 251.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1015) DZR PF12773.7 gi|452211437|ref|YP_007491551.1| - 1.2e-08 34.8 29.4 3.1e-06 27.1 8.0 3.1 1 1 3 4 4 4 4 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|452211437|ref|YP_007491551.1| - 4.6e-06 25.9 35.7 0.0012 18.2 1.8 5.3 4 2 0 4 4 4 2 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|452211437|ref|YP_007491551.1| - 7.2e-06 25.5 38.7 0.0018 18.0 2.3 5.5 4 1 0 4 4 4 3 zinc-ribbon domain zinc_ribbon_15 PF17032.5 gi|452211437|ref|YP_007491551.1| - 0.0076 17.0 2.7 0.0076 17.0 2.7 4.2 3 1 0 3 3 3 1 zinc-ribbon family Churchill PF06573.11 gi|452211437|ref|YP_007491551.1| - 0.11 12.8 1.9 0.17 12.2 0.4 2.0 1 1 1 2 2 2 0 Churchill protein DUF1258 PF06869.12 gi|452211437|ref|YP_007491551.1| - 0.79 9.2 7.7 0.52 9.8 1.5 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1258) zf-P11 PF03854.14 gi|452211437|ref|YP_007491551.1| - 5.3 6.8 15.0 0.53 10.0 0.4 3.6 4 0 0 4 4 4 0 P-11 zinc finger Rhodanese PF00581.20 gi|452211438|ref|YP_007491552.1| - 5.5e-27 94.4 0.1 9.5e-18 64.7 0.1 2.6 2 1 0 2 2 2 2 Rhodanese-like domain Lactamase_B PF00753.27 gi|452211438|ref|YP_007491552.1| - 0.00012 22.2 0.2 0.0011 19.0 0.2 2.6 3 1 0 3 3 3 1 Metallo-beta-lactamase superfamily DUF4157 PF13699.6 gi|452211440|ref|YP_007491554.1| - 0.057 13.6 0.0 0.093 13.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4157) DUF45 PF01863.17 gi|452211440|ref|YP_007491554.1| - 0.11 12.5 0.4 0.17 11.9 0.4 1.3 1 1 0 1 1 1 0 Protein of unknown function DUF45 DNA_gyraseB_C PF00986.21 gi|452211440|ref|YP_007491554.1| - 0.13 12.5 0.1 0.25 11.6 0.1 1.4 1 0 0 1 1 1 0 DNA gyrase B subunit, carboxyl terminus DUF916 PF06030.12 gi|452211441|ref|YP_007491555.1| - 1.7e-14 53.9 1.0 0.11 12.6 0.0 5.6 4 1 1 5 5 5 5 Bacterial protein of unknown function (DUF916) NPCBM_assoc PF10633.9 gi|452211441|ref|YP_007491555.1| - 9.1e-14 51.5 0.2 9e-05 22.7 0.1 5.1 5 2 0 5 5 5 2 NPCBM-associated, NEW3 domain of alpha-galactosidase fn3_5 PF06280.12 gi|452211441|ref|YP_007491555.1| - 5.1e-12 46.5 7.8 5.7e-05 23.8 0.9 4.7 3 2 0 3 3 3 2 Fn3-like domain FixG_C PF11614.8 gi|452211441|ref|YP_007491555.1| - 8.4e-08 32.5 0.3 0.16 12.2 0.0 3.7 3 1 0 3 3 3 3 IG-like fold at C-terminal of FixG, putative oxidoreductase DUF11 PF01345.18 gi|452211441|ref|YP_007491555.1| - 2.9e-07 30.7 0.1 0.24 11.7 0.0 4.4 3 2 0 3 3 3 2 Domain of unknown function DUF11 fn3_6 PF17766.1 gi|452211441|ref|YP_007491555.1| - 4.2e-06 26.9 0.6 2.6 8.3 0.0 4.6 3 2 0 4 4 4 2 Fibronectin type-III domain DUF4625 PF15418.6 gi|452211441|ref|YP_007491555.1| - 2e-05 24.9 3.5 0.028 14.7 0.1 3.4 3 1 0 3 3 3 2 Domain of unknown function (DUF4625) Big_2 PF02368.18 gi|452211441|ref|YP_007491555.1| - 0.00012 21.9 0.1 0.29 11.1 0.0 3.1 3 0 0 3 3 2 2 Bacterial Ig-like domain (group 2) Mfa_like_1 PF13149.6 gi|452211441|ref|YP_007491555.1| - 0.0012 19.0 5.2 0.022 14.8 0.7 3.3 2 1 1 3 3 3 1 Fimbrillin-like BACON PF13004.7 gi|452211441|ref|YP_007491555.1| - 0.005 16.8 4.5 1.2 9.2 0.1 3.9 4 0 0 4 4 4 2 Putative binding domain, N-terminal TRAP_alpha PF03896.16 gi|452211441|ref|YP_007491555.1| - 0.0065 15.7 0.2 0.11 11.7 0.0 2.2 2 0 0 2 2 2 1 Translocon-associated protein (TRAP), alpha subunit DUF1735 PF08522.10 gi|452211441|ref|YP_007491555.1| - 0.028 15.0 12.1 1.2 9.8 0.4 4.3 2 1 1 3 3 3 0 Domain of unknown function (DUF1735) MAP PF03642.13 gi|452211441|ref|YP_007491555.1| - 0.029 14.7 0.5 7.1 7.0 0.0 3.4 3 0 0 3 3 3 0 MAP domain DUF4832 PF16116.5 gi|452211441|ref|YP_007491555.1| - 0.1 12.5 0.0 43 3.9 0.0 3.5 3 1 0 3 3 3 0 Domain of unknown function (DUF4832) CBM_4_9 PF02018.17 gi|452211441|ref|YP_007491555.1| - 0.47 10.7 3.9 7 6.9 0.2 3.5 3 2 0 3 3 3 0 Carbohydrate binding domain CARDB PF07705.11 gi|452211441|ref|YP_007491555.1| - 1.9 8.8 7.6 13 6.1 0.1 4.0 3 3 0 3 3 3 0 CARDB HTH_38 PF13936.6 gi|452211443|ref|YP_007491557.1| - 2.7e-05 23.8 1.3 6e-05 22.7 1.3 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain Zn_Tnp_IS1 PF03811.13 gi|452211443|ref|YP_007491557.1| - 0.015 15.1 6.8 0.039 13.7 6.8 1.8 1 1 0 1 1 1 0 InsA N-terminal domain IBR PF01485.21 gi|452211443|ref|YP_007491557.1| - 0.016 15.4 0.7 0.046 14.0 0.7 1.8 1 0 0 1 1 1 0 IBR domain, a half RING-finger domain zf-BED PF02892.15 gi|452211443|ref|YP_007491557.1| - 0.028 14.4 0.4 0.064 13.3 0.4 1.7 1 0 0 1 1 1 0 BED zinc finger PyrI_C PF02748.15 gi|452211443|ref|YP_007491557.1| - 4.4 7.3 9.2 34 4.4 9.2 2.2 1 1 0 1 1 1 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain UPF0047 PF01894.17 gi|452211444|ref|YP_007491558.1| - 1.4e-29 102.6 0.0 1.6e-29 102.4 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 PKD PF00801.20 gi|452211446|ref|YP_007491560.1| - 1.2e-42 143.6 27.6 2.2e-13 49.9 2.7 5.4 5 0 0 5 5 5 4 PKD domain Laminin_G_3 PF13385.6 gi|452211446|ref|YP_007491560.1| - 7.7e-12 45.6 0.3 2.5e-11 43.9 0.0 2.1 2 0 0 2 2 2 1 Concanavalin A-like lectin/glucanases superfamily Polysacc_deac_1 PF01522.21 gi|452211446|ref|YP_007491560.1| - 3.3e-09 36.7 0.1 1.2e-08 34.9 0.1 2.0 1 0 0 1 1 1 1 Polysaccharide deacetylase PKD_3 PF16820.5 gi|452211446|ref|YP_007491560.1| - 4.4e-06 26.4 3.3 0.49 10.2 0.0 4.7 4 0 0 4 4 4 2 PKD-like domain PGF-CTERM PF18204.1 gi|452211446|ref|YP_007491560.1| - 2e-05 24.4 0.1 7.8e-05 22.5 0.0 2.1 2 0 0 2 2 2 1 PGF-CTERM motif DUF2334 PF10096.9 gi|452211446|ref|YP_007491560.1| - 2e-05 24.4 0.1 3.6e-05 23.5 0.1 1.4 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2334) MG2 PF01835.19 gi|452211446|ref|YP_007491560.1| - 0.025 15.0 0.8 0.58 10.6 0.1 3.4 3 1 1 4 4 4 0 MG2 domain Y_Y_Y PF07495.13 gi|452211446|ref|YP_007491560.1| - 0.13 12.3 13.1 0.64 10.0 0.4 4.6 5 0 0 5 5 5 0 Y_Y_Y domain RELT PF12606.8 gi|452211446|ref|YP_007491560.1| - 0.29 10.2 0.6 0.8 8.7 0.6 1.7 1 0 0 1 1 1 0 Tumour necrosis factor receptor superfamily member 19 Disaggr_assoc PF08480.10 gi|452211447|ref|YP_007491561.1| - 6.6e-76 254.4 11.7 6.6e-76 254.4 11.7 2.1 2 1 0 2 2 2 1 Disaggregatase related Beta_helix PF13229.6 gi|452211447|ref|YP_007491561.1| - 2.2e-08 34.1 51.2 5.3e-06 26.4 21.6 3.7 2 1 1 3 3 3 2 Right handed beta helix region PGF-CTERM PF18204.1 gi|452211447|ref|YP_007491561.1| - 2.3e-05 24.2 0.0 2.3e-05 24.2 0.0 1.7 2 0 0 2 2 2 1 PGF-CTERM motif Hexapep PF00132.24 gi|452211448|ref|YP_007491562.1| - 5.7e-06 25.9 15.6 0.00053 19.6 4.1 2.5 2 0 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|452211448|ref|YP_007491562.1| - 2.1e-05 24.2 13.4 0.018 14.8 1.1 2.6 2 0 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase Lactamase_B_2 PF12706.7 gi|452211450|ref|YP_007491564.1| - 8.1e-22 77.7 0.1 1e-21 77.4 0.1 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|452211450|ref|YP_007491564.1| - 1.1e-08 35.3 1.8 4.5e-08 33.3 1.8 2.0 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily PDEase_II PF02112.15 gi|452211450|ref|YP_007491564.1| - 0.13 11.4 0.2 0.32 10.1 0.0 1.6 2 0 0 2 2 2 0 cAMP phosphodiesterases class-II Lactamase_B_6 PF16661.5 gi|452211450|ref|YP_007491564.1| - 0.14 11.6 0.0 0.34 10.3 0.0 1.6 2 0 0 2 2 2 0 Metallo-beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|452211450|ref|YP_007491564.1| - 0.14 12.0 0.1 0.24 11.3 0.1 1.5 1 1 0 1 1 1 0 Beta-lactamase superfamily domain MannoseP_isomer PF01050.18 gi|452211452|ref|YP_007491566.1| - 6e-33 113.9 0.9 6e-33 113.9 0.9 1.7 2 0 0 2 2 2 1 Mannose-6-phosphate isomerase Glycos_transf_1 PF00534.20 gi|452211452|ref|YP_007491566.1| - 5.2e-23 81.4 0.0 9e-23 80.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|452211452|ref|YP_007491566.1| - 1.4e-14 54.7 0.0 2.9e-14 53.6 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Cupin_2 PF07883.11 gi|452211452|ref|YP_007491566.1| - 2.4e-09 36.7 0.1 5.1e-09 35.7 0.1 1.6 1 0 0 1 1 1 1 Cupin domain Glyco_transf_4 PF13439.6 gi|452211452|ref|YP_007491566.1| - 2.7e-09 37.2 0.3 6.5e-09 36.0 0.3 1.7 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|452211452|ref|YP_007491566.1| - 4.9e-05 23.6 0.0 0.00013 22.3 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|452211452|ref|YP_007491566.1| - 0.062 13.7 0.1 0.24 11.8 0.1 1.9 1 1 0 1 1 1 0 Glycosyl transferase 4-like domain Glyco_hydro_130 PF04041.13 gi|452211453|ref|YP_007491567.1| - 4.5e-57 193.4 0.0 5.6e-57 193.1 0.0 1.0 1 0 0 1 1 1 1 beta-1,4-mannooligosaccharide phosphorylase Glyco_hydro_32N PF00251.20 gi|452211453|ref|YP_007491567.1| - 0.16 11.5 0.0 0.66 9.5 0.0 1.7 1 1 1 2 2 2 0 Glycosyl hydrolases family 32 N-terminal domain Glycos_transf_1 PF00534.20 gi|452211454|ref|YP_007491568.1| - 5.9e-15 55.2 0.0 1.2e-14 54.3 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|452211454|ref|YP_007491568.1| - 1.1e-12 48.5 0.0 2.5e-12 47.4 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|452211454|ref|YP_007491568.1| - 1.8e-09 37.9 0.0 3.8e-09 36.8 0.0 1.5 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_hydro_88 PF07470.13 gi|452211454|ref|YP_007491568.1| - 0.00061 19.0 0.2 0.25 10.4 0.1 2.7 2 1 0 2 2 2 2 Glycosyl Hydrolase Family 88 Glyco_hydro_76 PF03663.14 gi|452211454|ref|YP_007491568.1| - 0.0098 15.4 0.1 0.017 14.7 0.1 1.4 1 0 0 1 1 1 1 Glycosyl hydrolase family 76 Glyco_hydro_127 PF07944.12 gi|452211454|ref|YP_007491568.1| - 0.011 14.3 1.0 0.9 8.0 0.2 2.5 2 1 0 2 2 2 0 Beta-L-arabinofuranosidase, GH127 Glyco_trans_1_2 PF13524.6 gi|452211454|ref|YP_007491568.1| - 0.017 15.5 0.0 0.051 14.0 0.0 1.7 1 0 0 1 1 1 0 Glycosyl transferases group 1 C5-epim_C PF06662.13 gi|452211454|ref|YP_007491568.1| - 0.031 13.8 0.6 4.4 6.8 0.1 2.5 2 0 0 2 2 2 0 D-glucuronyl C5-epimerase C-terminus Mic1 PF07035.12 gi|452211454|ref|YP_007491568.1| - 0.12 12.1 0.0 0.4 10.4 0.0 1.8 1 0 0 1 1 1 0 Colon cancer-associated protein Mic1-like Urease_gamma PF00547.18 gi|452211454|ref|YP_007491568.1| - 0.14 12.4 0.0 0.36 11.2 0.0 1.6 1 0 0 1 1 1 0 Urease, gamma subunit Disaggr_repeat PF06848.11 gi|452211457|ref|YP_007491571.1| - 3.4e-90 300.5 3.3 6.4e-90 299.6 3.3 1.5 1 0 0 1 1 1 1 Disaggregatase related repeat Disaggr_assoc PF08480.10 gi|452211457|ref|YP_007491571.1| - 2.3e-77 259.2 13.2 2.3e-77 259.2 13.2 3.5 3 1 1 4 4 4 1 Disaggregatase related Beta_helix PF13229.6 gi|452211457|ref|YP_007491571.1| - 3.8e-14 52.8 47.9 1.1e-11 44.9 24.8 3.6 1 1 2 3 3 3 2 Right handed beta helix region DUF5123 PF17161.4 gi|452211457|ref|YP_007491571.1| - 0.00013 23.0 1.8 0.00013 23.0 1.8 3.9 3 1 1 4 4 4 1 Domain of unknown function (DUF5123) Rapsyn_N PF10579.9 gi|452211457|ref|YP_007491571.1| - 0.043 13.9 0.0 0.9 9.7 0.0 2.5 2 0 0 2 2 2 0 Rapsyn N-terminal myristoylation and linker region Coat_X PF07552.11 gi|452211457|ref|YP_007491571.1| - 0.15 11.9 1.1 1.6 8.6 0.1 2.3 2 0 0 2 2 2 0 Spore Coat Protein X and V domain DUF1699 PF08004.11 gi|452211459|ref|YP_007491573.1| - 1.4e-61 205.9 0.6 1.6e-61 205.7 0.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1699) DUF4394 PF14339.6 gi|452211459|ref|YP_007491573.1| - 0.062 12.6 0.0 0.084 12.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4394) PAM2 PF07145.15 gi|452211459|ref|YP_007491573.1| - 0.094 12.4 0.3 12 5.8 0.1 2.4 2 0 0 2 2 2 0 Ataxin-2 C-terminal region TrmB PF01978.19 gi|452211460|ref|YP_007491574.1| - 0.047 13.6 0.0 0.3 11.0 0.0 2.1 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB DUF2551 PF10826.8 gi|452211461|ref|YP_007491575.1| - 2e-34 117.6 0.8 2.5e-34 117.3 0.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2551) Penicillinase_R PF03965.16 gi|452211461|ref|YP_007491575.1| - 0.00029 21.2 0.0 0.0004 20.7 0.0 1.3 1 0 0 1 1 1 1 Penicillinase repressor RNHCP PF12647.7 gi|452211462|ref|YP_007491576.1| - 0.012 15.6 0.1 0.018 15.0 0.1 1.2 1 0 0 1 1 1 0 RNHCP domain DUF4867 PF16161.5 gi|452211462|ref|YP_007491576.1| - 0.11 11.9 0.1 0.16 11.4 0.1 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4867) zf-ACC PF17848.1 gi|452211462|ref|YP_007491576.1| - 0.42 10.7 2.0 3.4 7.8 0.1 2.5 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain PPK2 PF03976.14 gi|452211464|ref|YP_007491578.1| - 3.3e-135 448.8 5.4 6.9e-85 284.2 2.1 2.1 2 0 0 2 2 2 2 Polyphosphate kinase 2 (PPK2) AAA_33 PF13671.6 gi|452211464|ref|YP_007491578.1| - 0.026 14.7 0.0 1.7 8.8 0.0 3.2 1 1 0 1 1 1 0 AAA domain Vps8 PF12816.7 gi|452211464|ref|YP_007491578.1| - 0.097 12.2 0.0 0.32 10.5 0.0 1.8 3 0 0 3 3 3 0 Golgi CORVET complex core vacuolar protein 8 AAA_18 PF13238.6 gi|452211464|ref|YP_007491578.1| - 0.12 12.9 2.3 3.1 8.4 0.2 3.1 3 0 0 3 3 3 0 AAA domain SPECT1 PF18680.1 gi|452211464|ref|YP_007491578.1| - 6.4 6.4 9.0 0.22 11.2 1.2 2.3 2 1 1 3 3 3 0 Plasmodium host cell traversal SPECT1 Response_reg PF00072.24 gi|452211465|ref|YP_007491579.1| - 2.7e-25 88.7 0.0 3.3e-25 88.4 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain Acyl_transf_1 PF00698.21 gi|452211465|ref|YP_007491579.1| - 0.033 13.7 0.0 0.04 13.4 0.0 1.1 1 0 0 1 1 1 0 Acyl transferase domain Response_reg PF00072.24 gi|452211468|ref|YP_007491582.1| - 4.5e-26 91.2 0.1 5.8e-26 90.9 0.1 1.1 1 0 0 1 1 1 1 Response regulator receiver domain HisKA_2 PF07568.12 gi|452211469|ref|YP_007491583.1| - 1.1e-29 102.3 3.3 4.2e-29 100.4 1.4 2.8 2 0 0 2 2 2 1 Histidine kinase dCache_1 PF02743.18 gi|452211469|ref|YP_007491583.1| - 5.4e-26 91.9 0.1 1.6e-25 90.4 0.1 1.8 1 0 0 1 1 1 1 Cache domain PAS_3 PF08447.12 gi|452211469|ref|YP_007491583.1| - 4.4e-18 65.3 0.3 1.7e-17 63.5 0.1 2.1 2 0 0 2 2 2 1 PAS fold HAMP PF00672.25 gi|452211469|ref|YP_007491583.1| - 2.1e-10 40.8 0.1 2.5e-06 27.8 0.0 2.9 3 0 0 3 3 2 2 HAMP domain HATPase_c PF02518.26 gi|452211469|ref|YP_007491583.1| - 2.6e-08 34.3 0.0 1.6e-07 31.8 0.0 2.4 2 1 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Cache_3-Cache_2 PF17201.4 gi|452211469|ref|YP_007491583.1| - 1e-05 25.0 0.1 3.8e-05 23.1 0.0 2.0 2 0 0 2 2 2 1 Cache 3/Cache 2 fusion domain PAS PF00989.25 gi|452211469|ref|YP_007491583.1| - 0.00053 20.0 0.1 0.0016 18.5 0.1 1.9 1 0 0 1 1 1 1 PAS fold HWE_HK PF07536.14 gi|452211469|ref|YP_007491583.1| - 0.0036 18.0 0.0 0.01 16.5 0.0 1.8 1 0 0 1 1 1 1 HWE histidine kinase sCache_2 PF17200.4 gi|452211469|ref|YP_007491583.1| - 0.0077 16.1 0.0 0.032 14.1 0.0 2.0 2 0 0 2 2 2 1 Single Cache domain 2 HATPase_c_2 PF13581.6 gi|452211469|ref|YP_007491583.1| - 0.0087 16.0 0.0 0.028 14.4 0.0 1.8 1 1 0 1 1 1 1 Histidine kinase-like ATPase domain dCache_2 PF08269.11 gi|452211469|ref|YP_007491583.1| - 0.053 12.7 0.9 0.17 11.0 0.0 2.3 2 0 0 2 2 2 0 Cache domain TMP_2 PF06791.13 gi|452211469|ref|YP_007491583.1| - 0.14 11.8 0.9 11 5.7 0.2 2.3 2 0 0 2 2 2 0 Prophage tail length tape measure protein Hydantoinase_B PF02538.14 gi|452211469|ref|YP_007491583.1| - 0.26 9.7 1.8 1.9 6.8 0.2 2.2 2 0 0 2 2 2 0 Hydantoinase B/oxoprolinase DUF1724 PF08350.10 gi|452211470|ref|YP_007491584.1| - 1.3e-24 86.1 0.0 2.3e-24 85.3 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|452211470|ref|YP_007491584.1| - 0.00046 20.0 0.3 0.0012 18.6 0.3 1.8 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.6 gi|452211470|ref|YP_007491584.1| - 0.11 12.5 0.4 0.25 11.4 0.3 1.7 1 1 0 1 1 1 0 Winged helix-turn-helix DUF1724 PF08350.10 gi|452211474|ref|YP_007491588.1| - 3e-18 65.7 0.0 5.1e-18 65.0 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1724) TFIID_NTD2 PF04494.15 gi|452211474|ref|YP_007491588.1| - 0.0073 16.5 1.1 0.012 15.8 0.2 1.7 2 0 0 2 2 2 1 WD40 associated region in TFIID subunit, NTD2 domain HTH_45 PF14947.6 gi|452211474|ref|YP_007491588.1| - 0.081 12.9 0.1 0.16 12.0 0.1 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix PAS_3 PF08447.12 gi|452211475|ref|YP_007491589.1| - 3.9e-39 132.8 0.6 1.6e-19 70.0 0.0 2.2 2 0 0 2 2 2 2 PAS fold PAS PF00989.25 gi|452211475|ref|YP_007491589.1| - 4.6e-10 39.5 1.1 0.00055 19.9 0.1 2.6 2 2 0 2 2 2 2 PAS fold PAS_9 PF13426.7 gi|452211475|ref|YP_007491589.1| - 6.1e-10 39.3 0.7 0.00081 19.6 0.1 2.4 2 0 0 2 2 2 2 PAS domain PAS_11 PF14598.6 gi|452211475|ref|YP_007491589.1| - 1.5e-05 25.1 0.0 0.21 11.7 0.0 2.4 2 0 0 2 2 2 2 PAS domain PAS_4 PF08448.10 gi|452211475|ref|YP_007491589.1| - 1.7e-05 25.0 0.0 0.089 13.1 0.0 2.5 2 1 0 2 2 2 2 PAS fold zf-ZPR1 PF03367.13 gi|452211475|ref|YP_007491589.1| - 0.019 14.8 0.5 4.2 7.2 0.2 2.2 2 0 0 2 2 2 0 ZPR1 zinc-finger domain DUF3116 PF11313.8 gi|452211475|ref|YP_007491589.1| - 0.088 12.7 0.2 13 5.7 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3116) EF-hand_13 PF17958.1 gi|452211475|ref|YP_007491589.1| - 0.097 12.5 0.0 0.29 10.9 0.0 1.8 1 0 0 1 1 1 0 EF-hand domain SCAB-Ig PF16709.5 gi|452211475|ref|YP_007491589.1| - 0.12 12.4 0.0 3 8.0 0.0 2.4 2 0 0 2 2 2 0 Ig domain of plant-specific actin-binding protein DUF2769 PF10967.8 gi|452211476|ref|YP_007491590.1| - 5.6e-06 26.9 1.4 5.8e-06 26.9 1.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2769) B12-binding PF02310.19 gi|452211478|ref|YP_007491592.1| - 3e-26 91.8 0.4 5.1e-26 91.1 0.4 1.4 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.17 gi|452211478|ref|YP_007491592.1| - 3.8e-19 68.9 1.1 9.7e-19 67.6 1.1 1.7 1 0 0 1 1 1 1 B12 binding domain AA_permease_2 PF13520.6 gi|452211479|ref|YP_007491593.1| - 7.5e-66 222.7 47.5 8.8e-66 222.5 47.5 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|452211479|ref|YP_007491593.1| - 2.5e-11 42.8 39.7 4.7e-11 42.0 39.7 1.4 1 1 0 1 1 1 1 Amino acid permease HisKA_2 PF07568.12 gi|452211480|ref|YP_007491594.1| - 5.1e-30 103.4 1.1 5.1e-30 103.4 1.1 2.2 2 0 0 2 2 2 1 Histidine kinase dCache_1 PF02743.18 gi|452211480|ref|YP_007491594.1| - 2.6e-27 96.2 0.1 6.2e-27 95.0 0.1 1.6 1 0 0 1 1 1 1 Cache domain PAS_3 PF08447.12 gi|452211480|ref|YP_007491594.1| - 3e-18 65.9 0.1 8.7e-18 64.4 0.1 1.9 1 0 0 1 1 1 1 PAS fold HATPase_c PF02518.26 gi|452211480|ref|YP_007491594.1| - 2.3e-09 37.8 0.1 9.8e-09 35.7 0.1 2.2 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HAMP PF00672.25 gi|452211480|ref|YP_007491594.1| - 4.6e-09 36.5 0.2 2.6e-05 24.5 0.1 3.0 3 0 0 3 3 2 2 HAMP domain HATPase_c_2 PF13581.6 gi|452211480|ref|YP_007491594.1| - 5.8e-06 26.3 0.0 1.6e-05 24.8 0.0 1.8 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain Cache_3-Cache_2 PF17201.4 gi|452211480|ref|YP_007491594.1| - 3.4e-05 23.3 1.2 0.00015 21.2 0.0 2.5 3 0 0 3 3 3 1 Cache 3/Cache 2 fusion domain HWE_HK PF07536.14 gi|452211480|ref|YP_007491594.1| - 0.0011 19.6 0.0 0.0037 17.9 0.0 1.9 1 0 0 1 1 1 1 HWE histidine kinase SAS-6_N PF16531.5 gi|452211480|ref|YP_007491594.1| - 0.0037 17.8 0.1 1.1 9.8 0.0 2.7 2 0 0 2 2 2 1 Centriolar protein SAS N-terminal PAS PF00989.25 gi|452211480|ref|YP_007491594.1| - 0.019 15.0 0.3 0.12 12.4 0.0 2.6 3 0 0 3 3 3 0 PAS fold dCache_2 PF08269.11 gi|452211480|ref|YP_007491594.1| - 0.026 13.7 0.5 0.092 11.9 0.0 2.1 2 0 0 2 2 2 0 Cache domain CREPT PF16566.5 gi|452211480|ref|YP_007491594.1| - 0.028 14.6 4.7 0.43 10.7 0.0 2.9 3 0 0 3 3 3 0 Cell-cycle alteration and expression-elevated protein in tumour sCache_2 PF17200.4 gi|452211480|ref|YP_007491594.1| - 0.036 13.9 0.0 0.1 12.4 0.0 1.7 1 0 0 1 1 1 0 Single Cache domain 2 LSM PF01423.22 gi|452211480|ref|YP_007491594.1| - 0.12 12.1 0.1 0.36 10.6 0.1 1.8 1 0 0 1 1 1 0 LSM domain tRNA-synt_1 PF00133.22 gi|452211481|ref|YP_007491595.1| - 2.4e-150 501.7 0.1 3.3e-150 501.2 0.1 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|452211481|ref|YP_007491595.1| - 1.1e-36 126.1 0.3 2.2e-36 125.1 0.3 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|452211481|ref|YP_007491595.1| - 8.1e-17 61.0 0.3 2.3e-10 39.8 0.0 2.9 3 0 0 3 3 3 2 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|452211481|ref|YP_007491595.1| - 2.2e-05 24.0 0.0 3.8e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.6 gi|452211481|ref|YP_007491595.1| - 0.0025 17.4 0.0 0.0077 15.8 0.0 1.8 1 1 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1f PF01921.18 gi|452211481|ref|YP_007491595.1| - 0.0087 15.0 0.0 0.018 14.0 0.0 1.5 1 0 0 1 1 1 1 tRNA synthetases class I (K) IBR PF01485.21 gi|452211481|ref|YP_007491595.1| - 0.054 13.7 1.3 0.49 10.7 0.0 2.7 3 0 0 3 3 3 0 IBR domain, a half RING-finger domain MAF_flag10 PF01973.18 gi|452211482|ref|YP_007491596.1| - 3.3e-20 72.5 0.0 4.2e-20 72.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF115 zinc_ribbon_13 PF09855.9 gi|452211484|ref|YP_007491598.1| - 0.00014 22.0 4.6 0.0011 19.1 4.6 2.0 1 1 0 1 1 1 1 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) TF_Zn_Ribbon PF08271.12 gi|452211484|ref|YP_007491598.1| - 0.00055 19.4 1.2 0.11 12.0 0.1 2.2 2 0 0 2 2 2 2 TFIIB zinc-binding DUF35_N PF12172.8 gi|452211484|ref|YP_007491598.1| - 0.0028 17.5 0.3 0.58 10.1 0.1 2.2 2 0 0 2 2 2 2 Rubredoxin-like zinc ribbon domain (DUF35_N) PhnA_Zn_Ribbon PF08274.12 gi|452211484|ref|YP_007491598.1| - 0.0098 15.8 2.6 0.062 13.3 0.2 2.2 2 0 0 2 2 2 1 PhnA Zinc-Ribbon zf-ribbon_3 PF13248.6 gi|452211484|ref|YP_007491598.1| - 0.011 15.1 0.4 0.011 15.1 0.4 2.0 2 0 0 2 2 2 0 zinc-ribbon domain A2L_zn_ribbon PF08792.10 gi|452211484|ref|YP_007491598.1| - 0.024 14.4 4.0 0.44 10.3 0.2 2.4 2 0 0 2 2 2 0 A2L zinc ribbon domain Zn-ribbon_8 PF09723.10 gi|452211484|ref|YP_007491598.1| - 0.033 14.3 2.9 1.5 9.0 0.2 2.3 2 0 0 2 2 2 0 Zinc ribbon domain zinc_ribbon_2 PF13240.6 gi|452211484|ref|YP_007491598.1| - 0.034 13.9 4.2 0.045 13.5 1.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Zn_ribbon_SprT PF17283.2 gi|452211484|ref|YP_007491598.1| - 0.055 13.4 1.1 7.2 6.6 0.1 2.2 2 0 0 2 2 2 0 SprT-like zinc ribbon domain Lar_restr_allev PF14354.6 gi|452211484|ref|YP_007491598.1| - 0.12 12.8 2.4 0.27 11.6 2.4 1.5 1 1 0 1 1 1 0 Restriction alleviation protein Lar Rubredoxin_2 PF18073.1 gi|452211484|ref|YP_007491598.1| - 0.13 12.0 7.1 2.4 8.0 0.3 2.4 2 0 0 2 2 2 0 Rubredoxin metal binding domain Zn_Tnp_IS1595 PF12760.7 gi|452211484|ref|YP_007491598.1| - 0.35 10.9 2.6 1.8 8.6 2.6 2.0 1 1 0 1 1 1 0 Transposase zinc-ribbon domain TFIIS_C PF01096.18 gi|452211484|ref|YP_007491598.1| - 0.39 10.6 7.1 2.9 7.8 0.6 2.4 3 0 0 3 3 3 0 Transcription factor S-II (TFIIS) zf-TFIIB PF13453.6 gi|452211484|ref|YP_007491598.1| - 0.53 9.7 3.9 2.9 7.3 3.9 2.0 1 1 0 1 1 1 0 Transcription factor zinc-finger DUF1936 PF09151.10 gi|452211484|ref|YP_007491598.1| - 0.73 9.8 6.1 0.36 10.8 1.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1936) AAA_14 PF13173.6 gi|452211486|ref|YP_007491600.1| - 2.9e-14 53.2 0.0 6.5e-14 52.1 0.0 1.6 1 1 0 1 1 1 1 AAA domain DUF4143 PF13635.6 gi|452211486|ref|YP_007491600.1| - 4e-07 30.2 0.1 7.9e-07 29.3 0.1 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4143) CTP_transf_like PF01467.26 gi|452211487|ref|YP_007491601.1| - 7.2e-07 29.5 0.0 2.6e-06 27.7 0.0 2.0 2 0 0 2 2 2 1 Cytidylyltransferase-like TrmB PF01978.19 gi|452211488|ref|YP_007491602.1| - 5.2e-11 42.3 0.8 4.3e-05 23.3 0.1 2.5 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB HTH_23 PF13384.6 gi|452211488|ref|YP_007491602.1| - 1.1e-06 28.3 0.1 0.00098 18.8 0.0 2.5 2 0 0 2 2 2 2 Homeodomain-like domain HTH_29 PF13551.6 gi|452211488|ref|YP_007491602.1| - 1.5e-06 28.2 0.0 0.0013 18.7 0.0 2.5 2 0 0 2 2 2 1 Winged helix-turn helix HTH_28 PF13518.6 gi|452211488|ref|YP_007491602.1| - 2.8e-06 27.4 0.0 0.00053 20.1 0.0 2.5 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|452211488|ref|YP_007491602.1| - 2.1e-05 24.3 1.3 0.043 13.7 0.2 2.5 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 gi|452211488|ref|YP_007491602.1| - 0.00024 20.6 0.1 0.0015 18.0 0.1 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding Terminase_5 PF06056.12 gi|452211488|ref|YP_007491602.1| - 0.00078 19.3 0.1 1.2 9.1 0.0 3.1 3 0 0 3 3 3 1 Putative ATPase subunit of terminase (gpP-like) MarR_2 PF12802.7 gi|452211488|ref|YP_007491602.1| - 0.0034 17.2 0.0 0.51 10.3 0.0 2.4 2 0 0 2 2 2 1 MarR family GerE PF00196.19 gi|452211488|ref|YP_007491602.1| - 0.006 16.1 2.8 0.19 11.3 0.5 2.5 2 0 0 2 2 2 1 Bacterial regulatory proteins, luxR family TetR_N PF00440.23 gi|452211488|ref|YP_007491602.1| - 0.0062 16.3 4.3 0.26 11.1 0.0 3.1 3 0 0 3 3 3 1 Bacterial regulatory proteins, tetR family UPF0122 PF04297.14 gi|452211488|ref|YP_007491602.1| - 0.008 16.4 1.6 0.34 11.2 0.1 2.6 2 0 0 2 2 2 1 Putative helix-turn-helix protein, YlxM / p13 like HTH_6 PF01418.17 gi|452211488|ref|YP_007491602.1| - 0.016 15.2 0.2 1.5 8.8 0.1 2.5 2 0 0 2 2 2 0 Helix-turn-helix domain, rpiR family HTH_20 PF12840.7 gi|452211488|ref|YP_007491602.1| - 0.016 15.3 0.0 3.6 7.7 0.0 2.6 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_17 PF12728.7 gi|452211488|ref|YP_007491602.1| - 0.02 15.1 3.0 3.6 7.8 0.1 3.4 4 0 0 4 4 3 0 Helix-turn-helix domain Rrf2 PF02082.20 gi|452211488|ref|YP_007491602.1| - 0.025 14.9 1.6 0.11 12.8 0.2 2.2 2 0 0 2 2 2 0 Transcriptional regulator HTH_Tnp_ISL3 PF13542.6 gi|452211488|ref|YP_007491602.1| - 0.025 14.0 0.0 0.14 11.6 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 MarR PF01047.22 gi|452211488|ref|YP_007491602.1| - 0.033 14.1 1.3 8.2 6.4 0.1 2.4 2 0 0 2 2 2 0 MarR family HTH_38 PF13936.6 gi|452211488|ref|YP_007491602.1| - 0.034 13.9 0.2 0.54 10.1 0.1 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_36 PF13730.6 gi|452211488|ref|YP_007491602.1| - 0.047 13.6 0.7 0.17 11.8 0.2 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain PadR PF03551.14 gi|452211488|ref|YP_007491602.1| - 0.055 13.4 0.2 5.6 7.0 0.0 3.1 3 0 0 3 3 3 0 Transcriptional regulator PadR-like family HTH_27 PF13463.6 gi|452211488|ref|YP_007491602.1| - 0.059 13.9 0.9 1.9 9.0 0.1 2.4 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_1 PF00126.27 gi|452211488|ref|YP_007491602.1| - 0.079 12.9 0.1 0.18 11.8 0.1 1.6 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_40 PF14493.6 gi|452211488|ref|YP_007491602.1| - 0.08 13.4 3.2 0.17 12.3 0.1 2.8 3 1 0 3 3 3 0 Helix-turn-helix domain HTH_Tnp_1 PF01527.20 gi|452211488|ref|YP_007491602.1| - 0.11 12.8 0.0 2.9 8.3 0.0 2.4 2 0 0 2 2 2 0 Transposase HTH_IclR PF09339.10 gi|452211488|ref|YP_007491602.1| - 0.14 11.9 0.0 7.9 6.4 0.0 2.3 2 0 0 2 2 2 0 IclR helix-turn-helix domain HTH_11 PF08279.12 gi|452211488|ref|YP_007491602.1| - 0.47 10.4 3.9 1.6 8.8 0.4 2.6 2 0 0 2 2 2 0 HTH domain Fer4_13 PF13370.6 gi|452211489|ref|YP_007491603.1| - 1.8e-20 73.2 6.2 2.4e-20 72.8 6.2 1.1 1 0 0 1 1 1 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|452211489|ref|YP_007491603.1| - 1e-08 35.8 4.9 1.4e-08 35.3 4.9 1.2 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_7 PF12838.7 gi|452211489|ref|YP_007491603.1| - 0.0042 17.6 3.8 0.01 16.4 3.8 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452211489|ref|YP_007491603.1| - 0.01 16.0 2.9 0.012 15.8 2.2 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|452211489|ref|YP_007491603.1| - 0.011 15.9 6.3 0.086 13.0 6.4 1.9 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4 PF00037.27 gi|452211489|ref|YP_007491603.1| - 0.025 14.4 8.5 0.29 11.0 0.8 2.8 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_19 PF06902.11 gi|452211489|ref|YP_007491603.1| - 0.033 14.3 1.1 0.044 13.9 1.1 1.2 1 0 0 1 1 1 0 Divergent 4Fe-4S mono-cluster Fer4_11 PF13247.6 gi|452211489|ref|YP_007491603.1| - 0.036 14.2 2.5 0.048 13.8 2.5 1.1 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|452211489|ref|YP_007491603.1| - 0.059 13.5 4.9 0.14 12.3 5.0 1.6 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|452211489|ref|YP_007491603.1| - 7.2 7.8 8.4 37 5.6 2.0 2.6 2 1 0 2 2 2 0 4Fe-4S binding domain HTH_5 PF01022.20 gi|452211490|ref|YP_007491604.1| - 9.7e-07 28.6 1.4 1.3e-06 28.2 0.2 1.9 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|452211490|ref|YP_007491604.1| - 9.6e-06 25.6 0.3 2.7e-05 24.1 0.1 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_45 PF14947.6 gi|452211490|ref|YP_007491604.1| - 0.004 17.1 0.3 0.0098 15.9 0.3 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix Viral_DNA_Zn_bi PF03728.13 gi|452211490|ref|YP_007491604.1| - 0.031 14.8 0.5 4.6 7.9 0.2 2.3 2 0 0 2 2 2 0 Viral DNA-binding protein, zinc binding domain DUF5344 PF17279.2 gi|452211490|ref|YP_007491604.1| - 0.12 12.9 1.6 0.22 12.1 0.5 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5344) VWA_2 PF13519.6 gi|452211492|ref|YP_007491606.1| - 1.4e-06 28.9 0.0 1.8e-05 25.4 0.0 2.4 1 1 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 gi|452211492|ref|YP_007491606.1| - 5.4e-05 23.5 0.0 0.00014 22.2 0.0 1.7 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 gi|452211492|ref|YP_007491606.1| - 0.13 11.6 0.1 2.7 7.3 0.1 2.1 2 0 0 2 2 2 0 VWA domain containing CoxE-like protein AAA_5 PF07728.14 gi|452211494|ref|YP_007491608.1| - 3.9e-32 111.1 0.0 5.2e-32 110.7 0.0 1.2 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) CbbQ_C PF08406.10 gi|452211494|ref|YP_007491608.1| - 4.1e-32 110.3 0.0 1.5e-31 108.5 0.0 1.9 2 0 0 2 2 2 1 CbbQ/NirQ/NorQ C-terminal AAA_22 PF13401.6 gi|452211494|ref|YP_007491608.1| - 0.0013 19.0 0.0 0.0022 18.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 gi|452211494|ref|YP_007491608.1| - 0.0027 18.1 0.0 0.0043 17.5 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_3 PF07726.11 gi|452211494|ref|YP_007491608.1| - 0.0029 17.5 0.0 0.0044 16.9 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 gi|452211494|ref|YP_007491608.1| - 0.0096 15.6 0.0 0.025 14.3 0.0 1.7 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_6 PF12774.7 gi|452211494|ref|YP_007491608.1| - 0.016 14.2 0.0 0.03 13.3 0.0 1.3 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region Mg_chelatase PF01078.21 gi|452211494|ref|YP_007491608.1| - 0.017 14.5 0.0 2.4 7.5 0.0 2.3 1 1 1 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_14 PF13173.6 gi|452211494|ref|YP_007491608.1| - 0.024 14.7 0.0 0.05 13.6 0.0 1.7 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|452211494|ref|YP_007491608.1| - 0.03 14.7 0.0 0.051 14.0 0.0 1.4 1 0 0 1 1 1 0 RNA helicase AAA_7 PF12775.7 gi|452211494|ref|YP_007491608.1| - 0.047 13.2 0.0 0.075 12.5 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region NACHT PF05729.12 gi|452211494|ref|YP_007491608.1| - 0.13 12.2 0.0 0.23 11.3 0.0 1.4 1 0 0 1 1 1 0 NACHT domain TsaE PF02367.17 gi|452211494|ref|YP_007491608.1| - 0.13 12.2 0.0 0.27 11.2 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_16 PF13191.6 gi|452211494|ref|YP_007491608.1| - 0.21 12.0 0.0 0.32 11.4 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain Radical_SAM PF04055.21 gi|452211495|ref|YP_007491609.1| - 4.5e-06 27.2 0.8 4.5e-06 27.2 0.8 2.3 2 1 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|452211495|ref|YP_007491609.1| - 0.0048 17.2 1.6 0.019 15.2 1.6 1.9 1 1 0 1 1 1 1 4Fe-4S single cluster domain zf-tcix PF14952.6 gi|452211495|ref|YP_007491609.1| - 3.2 7.5 10.9 6.6 6.4 0.4 2.6 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding HisKA_2 PF07568.12 gi|452211496|ref|YP_007491610.1| - 6.8e-27 93.4 0.2 1.7e-26 92.1 0.2 1.7 1 0 0 1 1 1 1 Histidine kinase PAS_3 PF08447.12 gi|452211496|ref|YP_007491610.1| - 1.3e-16 60.7 0.0 2.7e-16 59.6 0.0 1.6 1 0 0 1 1 1 1 PAS fold HATPase_c PF02518.26 gi|452211496|ref|YP_007491610.1| - 2.4e-11 44.1 0.0 9.9e-11 42.1 0.0 2.0 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HWE_HK PF07536.14 gi|452211496|ref|YP_007491610.1| - 1.7e-06 28.7 0.0 3.4e-06 27.7 0.0 1.5 1 0 0 1 1 1 1 HWE histidine kinase PAS_9 PF13426.7 gi|452211496|ref|YP_007491610.1| - 0.0011 19.2 0.1 0.0059 16.8 0.1 2.3 2 0 0 2 2 2 1 PAS domain HATPase_c_2 PF13581.6 gi|452211496|ref|YP_007491610.1| - 0.014 15.3 0.0 0.028 14.4 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain SPOB_a PF14689.6 gi|452211496|ref|YP_007491610.1| - 0.057 13.1 0.0 0.14 11.9 0.0 1.6 1 0 0 1 1 1 0 Sensor_kinase_SpoOB-type, alpha-helical domain Nitroreductase PF00881.24 gi|452211498|ref|YP_007491612.1| - 1.4e-21 77.3 0.0 1.6e-21 77.1 0.0 1.0 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.6 gi|452211498|ref|YP_007491612.1| - 0.00066 19.3 0.0 0.00075 19.1 0.0 1.1 1 0 0 1 1 1 1 Putative TM nitroreductase His_Phos_1 PF00300.22 gi|452211499|ref|YP_007491613.1| - 3.9e-37 127.8 0.0 4.8e-20 72.1 0.0 2.0 2 0 0 2 2 2 2 Histidine phosphatase superfamily (branch 1) DUF4110 PF13422.6 gi|452211499|ref|YP_007491613.1| - 0.026 14.6 0.0 0.069 13.2 0.0 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4110) HD PF01966.22 gi|452211500|ref|YP_007491614.1| - 1.5e-07 31.6 1.1 2.3e-07 31.0 1.1 1.4 1 0 0 1 1 1 1 HD domain PepSY PF03413.19 gi|452211501|ref|YP_007491615.1| - 2.3e-09 37.6 1.5 0.00086 19.8 0.1 4.1 3 3 0 3 3 3 3 Peptidase propeptide and YPEB domain PepSY PF03413.19 gi|452211502|ref|YP_007491616.1| - 3.8e-08 33.8 0.9 0.0026 18.3 0.3 3.7 3 2 0 3 3 3 2 Peptidase propeptide and YPEB domain RNA_polI_A14 PF08203.11 gi|452211502|ref|YP_007491616.1| - 0.27 12.0 0.7 8.6 7.2 0.0 2.6 2 0 0 2 2 2 0 Yeast RNA polymerase I subunit RPA14 DDE_3 PF13358.6 gi|452211503|ref|YP_007491617.1| - 2e-28 99.0 0.2 2.5e-28 98.7 0.2 1.1 1 0 0 1 1 1 1 DDE superfamily endonuclease DUF287 PF03384.14 gi|452211503|ref|YP_007491617.1| - 0.053 13.9 0.7 0.053 13.9 0.7 2.1 2 0 0 2 2 2 0 Drosophila protein of unknown function, DUF287 HTH_32 PF13565.6 gi|452211504|ref|YP_007491618.1| - 2.3e-12 47.4 0.0 2.5e-12 47.2 0.0 1.0 1 0 0 1 1 1 1 Homeodomain-like domain ResIII PF04851.15 gi|452211505|ref|YP_007491619.1| - 9.6e-27 94.1 0.0 4e-26 92.0 0.0 1.9 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit ERCC3_RAD25_C PF16203.5 gi|452211505|ref|YP_007491619.1| - 5.8e-21 74.8 0.4 9.3e-21 74.2 0.4 1.3 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase XPB_DRD PF18458.1 gi|452211505|ref|YP_007491619.1| - 1.2e-20 73.1 0.1 8.5e-20 70.4 0.0 2.5 3 0 0 3 3 3 1 Xeroderma pigmentosum group B helicase damage recognition domain Helicase_C PF00271.31 gi|452211505|ref|YP_007491619.1| - 1.2e-16 61.0 0.1 5.2e-16 59.0 0.3 2.0 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.29 gi|452211505|ref|YP_007491619.1| - 2.5e-07 30.6 0.0 9.7e-07 28.7 0.0 2.0 1 1 0 1 1 1 1 DEAD/DEAH box helicase CBS PF00571.28 gi|452211505|ref|YP_007491619.1| - 0.14 12.6 0.0 1.9 9.0 0.0 2.5 2 0 0 2 2 2 0 CBS domain PalH PF08733.10 gi|452211510|ref|YP_007491624.1| - 0.27 10.2 9.6 0.35 9.8 9.6 1.1 1 0 0 1 1 1 0 PalH/RIM21 DUF975 PF06161.11 gi|452211510|ref|YP_007491624.1| - 0.27 11.0 21.8 0.49 10.1 21.8 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF975) EMP70 PF02990.16 gi|452211510|ref|YP_007491624.1| - 1.3 7.6 12.1 1.6 7.3 12.1 1.0 1 0 0 1 1 1 0 Endomembrane protein 70 DUF4013 PF13197.6 gi|452211510|ref|YP_007491624.1| - 1.8 8.4 25.8 3.1 7.6 25.7 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF4013) ERGIC_N PF13850.6 gi|452211510|ref|YP_007491624.1| - 2.6 8.5 0.0 2.6 8.5 0.0 2.4 1 1 2 3 3 3 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) DUF4736 PF15883.5 gi|452211510|ref|YP_007491624.1| - 8.5 6.0 5.9 0.86 9.3 0.1 2.1 2 1 1 3 3 3 0 Domain of unknown function (DUF4736) Acetyltransf_10 PF13673.7 gi|452211511|ref|YP_007491625.1| - 1.5e-17 63.7 0.1 1.7e-17 63.5 0.1 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|452211511|ref|YP_007491625.1| - 1e-12 48.3 0.2 1.3e-12 48.0 0.2 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|452211511|ref|YP_007491625.1| - 2.7e-08 34.1 0.4 3.9e-08 33.6 0.4 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_5 PF13444.6 gi|452211511|ref|YP_007491625.1| - 0.00043 21.0 0.1 0.033 14.9 0.0 2.2 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|452211511|ref|YP_007491625.1| - 0.00098 19.1 0.1 0.0015 18.5 0.1 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 gi|452211511|ref|YP_007491625.1| - 0.0055 16.8 0.1 0.063 13.4 0.1 2.0 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.7 gi|452211511|ref|YP_007491625.1| - 0.03 14.5 0.0 0.041 14.0 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain ATPase PF06745.13 gi|452211512|ref|YP_007491626.1| - 1.6e-61 207.6 0.0 1.8e-61 207.4 0.0 1.0 1 0 0 1 1 1 1 KaiC GvpD PF07088.11 gi|452211512|ref|YP_007491626.1| - 6.8e-05 21.7 0.2 0.06 12.0 0.0 2.3 2 1 0 2 2 2 2 GvpD gas vesicle protein RecA PF00154.21 gi|452211512|ref|YP_007491626.1| - 0.0033 16.9 0.0 0.0046 16.4 0.0 1.2 1 0 0 1 1 1 1 recA bacterial DNA recombination protein Rad51 PF08423.11 gi|452211512|ref|YP_007491626.1| - 0.0039 16.5 0.1 0.011 15.0 0.0 1.9 2 0 0 2 2 2 1 Rad51 DUF2075 PF09848.9 gi|452211512|ref|YP_007491626.1| - 0.0057 15.9 0.0 0.0095 15.2 0.0 1.4 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) ResIII PF04851.15 gi|452211512|ref|YP_007491626.1| - 0.0061 16.6 0.0 0.012 15.6 0.0 1.4 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit DnaB_C PF03796.15 gi|452211512|ref|YP_007491626.1| - 0.042 13.2 0.0 0.069 12.5 0.0 1.4 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain AAA_25 PF13481.6 gi|452211512|ref|YP_007491626.1| - 0.055 13.0 0.0 0.11 12.1 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|452211512|ref|YP_007491626.1| - 0.071 13.4 1.0 1.7 8.9 1.0 2.3 1 1 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 gi|452211512|ref|YP_007491626.1| - 0.086 12.5 0.0 0.13 11.9 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_14 PF13173.6 gi|452211512|ref|YP_007491626.1| - 0.11 12.5 0.0 0.87 9.6 0.0 2.1 2 0 0 2 2 2 0 AAA domain MEDS PF14417.6 gi|452211512|ref|YP_007491626.1| - 0.13 12.1 0.0 0.3 10.9 0.0 1.6 1 1 0 1 1 1 0 MEDS: MEthanogen/methylotroph, DcmR Sensory domain Zot PF05707.12 gi|452211512|ref|YP_007491626.1| - 0.15 11.7 0.1 0.92 9.1 0.1 1.9 2 0 0 2 2 2 0 Zonular occludens toxin (Zot) AAA_16 PF13191.6 gi|452211512|ref|YP_007491626.1| - 0.17 12.2 0.0 0.47 10.8 0.0 1.7 1 1 0 1 1 1 0 AAA ATPase domain MetOD1 PF18546.1 gi|452211513|ref|YP_007491627.1| - 1.4e-46 158.3 0.6 1.9e-46 157.9 0.6 1.2 1 0 0 1 1 1 1 Metanogen output domain 1 Response_reg PF00072.24 gi|452211513|ref|YP_007491627.1| - 3.3e-29 101.3 0.2 5.8e-29 100.5 0.2 1.4 1 0 0 1 1 1 1 Response regulator receiver domain DUF3939 PF13075.6 gi|452211513|ref|YP_007491627.1| - 0.046 13.7 0.0 0.087 12.8 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3939) CPL PF08144.11 gi|452211513|ref|YP_007491627.1| - 0.093 13.1 0.1 1.4 9.3 0.0 2.2 2 0 0 2 2 2 0 CPL (NUC119) domain ATPase PF06745.13 gi|452211514|ref|YP_007491628.1| - 3.9e-44 150.7 0.2 4.3e-44 150.6 0.2 1.0 1 0 0 1 1 1 1 KaiC RecA PF00154.21 gi|452211514|ref|YP_007491628.1| - 4.1e-08 33.0 0.3 1.5e-06 27.9 0.0 2.1 2 0 0 2 2 2 1 recA bacterial DNA recombination protein GvpD PF07088.11 gi|452211514|ref|YP_007491628.1| - 1.8e-05 23.6 0.1 2.9e-05 22.9 0.1 1.2 1 1 0 1 1 1 1 GvpD gas vesicle protein AAA_25 PF13481.6 gi|452211514|ref|YP_007491628.1| - 2.4e-05 24.0 0.4 0.00025 20.7 0.4 2.1 1 1 0 1 1 1 1 AAA domain DnaB_C PF03796.15 gi|452211514|ref|YP_007491628.1| - 2.4e-05 23.8 0.0 9.3e-05 21.9 0.0 1.9 2 1 0 2 2 2 1 DnaB-like helicase C terminal domain IstB_IS21 PF01695.17 gi|452211514|ref|YP_007491628.1| - 2.7e-05 24.0 0.3 0.0016 18.2 0.0 2.3 2 1 0 2 2 2 1 IstB-like ATP binding protein NTPase_1 PF03266.15 gi|452211514|ref|YP_007491628.1| - 8.2e-05 22.6 1.5 0.00066 19.6 1.5 2.1 1 1 0 1 1 1 1 NTPase cobW PF02492.19 gi|452211514|ref|YP_007491628.1| - 0.00015 21.4 0.8 0.00095 18.8 0.5 2.1 1 1 1 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain DUF2075 PF09848.9 gi|452211514|ref|YP_007491628.1| - 0.00022 20.6 0.0 0.00025 20.4 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_16 PF13191.6 gi|452211514|ref|YP_007491628.1| - 0.00024 21.5 0.0 0.00031 21.2 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|452211514|ref|YP_007491628.1| - 0.00027 21.2 0.2 0.0012 19.1 0.2 2.0 1 1 0 1 1 1 1 AAA domain DUF835 PF05763.12 gi|452211514|ref|YP_007491628.1| - 0.00062 19.5 0.6 0.0015 18.3 0.5 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF835) DEAD PF00270.29 gi|452211514|ref|YP_007491628.1| - 0.00068 19.5 0.0 0.0012 18.6 0.0 1.5 1 1 0 1 1 1 1 DEAD/DEAH box helicase AAA_5 PF07728.14 gi|452211514|ref|YP_007491628.1| - 0.00098 19.1 0.0 0.0018 18.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|452211514|ref|YP_007491628.1| - 0.0034 17.8 0.0 0.025 15.0 0.0 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 gi|452211514|ref|YP_007491628.1| - 0.0069 16.1 0.7 0.021 14.6 0.7 1.8 1 1 0 1 1 1 1 AAA domain Zot PF05707.12 gi|452211514|ref|YP_007491628.1| - 0.021 14.5 0.0 0.22 11.1 0.0 2.1 2 0 0 2 2 2 0 Zonular occludens toxin (Zot) T2SSE PF00437.20 gi|452211514|ref|YP_007491628.1| - 0.024 13.7 0.0 0.038 13.0 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_18 PF13238.6 gi|452211514|ref|YP_007491628.1| - 0.035 14.7 0.3 0.071 13.6 0.3 1.7 1 1 0 1 1 1 0 AAA domain Guanylate_kin PF00625.21 gi|452211514|ref|YP_007491628.1| - 0.062 13.0 0.1 0.23 11.1 0.1 1.9 1 1 0 1 1 1 0 Guanylate kinase AAA_19 PF13245.6 gi|452211514|ref|YP_007491628.1| - 0.096 13.0 0.1 0.14 12.5 0.1 1.5 1 1 0 1 1 1 0 AAA domain AAA_11 PF13086.6 gi|452211514|ref|YP_007491628.1| - 0.11 12.3 0.5 0.37 10.5 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_14 PF13173.6 gi|452211514|ref|YP_007491628.1| - 0.11 12.6 0.1 0.32 11.0 0.0 2.0 1 1 0 1 1 1 0 AAA domain MEDS PF14417.6 gi|452211514|ref|YP_007491628.1| - 0.11 12.3 0.0 0.2 11.5 0.0 1.3 1 0 0 1 1 1 0 MEDS: MEthanogen/methylotroph, DcmR Sensory domain ResIII PF04851.15 gi|452211514|ref|YP_007491628.1| - 0.11 12.4 0.0 0.17 11.9 0.0 1.4 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit Peptidase_M50 PF02163.22 gi|452211515|ref|YP_007491629.1| - 1.4e-20 73.6 0.0 1.9e-19 69.9 0.0 2.2 1 1 0 1 1 1 1 Peptidase family M50 PDZ_2 PF13180.6 gi|452211515|ref|YP_007491629.1| - 4.7e-17 62.1 0.1 8.4e-10 38.8 0.1 2.3 2 0 0 2 2 2 2 PDZ domain PDZ_6 PF17820.1 gi|452211515|ref|YP_007491629.1| - 5.6e-09 35.7 0.0 0.0036 17.1 0.0 2.5 2 0 0 2 2 2 2 PDZ domain PDZ PF00595.24 gi|452211515|ref|YP_007491629.1| - 0.00044 20.5 0.1 1.1 9.6 0.0 2.4 2 0 0 2 2 2 2 PDZ domain MaoC_dehydratas PF01575.19 gi|452211515|ref|YP_007491629.1| - 0.16 11.5 0.0 0.39 10.3 0.0 1.6 1 0 0 1 1 1 0 MaoC like domain CutA1 PF03091.15 gi|452211516|ref|YP_007491630.1| - 1.2e-31 108.4 0.1 1.4e-31 108.3 0.1 1.0 1 0 0 1 1 1 1 CutA1 divalent ion tolerance protein FixG_C PF11614.8 gi|452211517|ref|YP_007491631.1| - 0.0027 17.9 0.0 0.0052 17.0 0.0 1.4 1 0 0 1 1 1 1 IG-like fold at C-terminal of FixG, putative oxidoreductase DUF3402 PF11882.8 gi|452211517|ref|YP_007491631.1| - 0.026 13.7 0.2 0.033 13.3 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3402) NPCBM_assoc PF10633.9 gi|452211517|ref|YP_007491631.1| - 0.029 14.6 0.0 0.066 13.5 0.0 1.6 1 0 0 1 1 1 0 NPCBM-associated, NEW3 domain of alpha-galactosidase YtxH PF12732.7 gi|452211517|ref|YP_007491631.1| - 0.26 11.8 4.6 0.84 10.2 3.4 2.4 1 1 1 2 2 2 0 YtxH-like protein RRF PF01765.19 gi|452211517|ref|YP_007491631.1| - 1 9.3 4.8 3.4 7.6 4.8 1.8 1 1 0 1 1 1 0 Ribosome recycling factor ODV-E18 PF10717.9 gi|452211517|ref|YP_007491631.1| - 3 7.8 5.9 0.26 11.2 0.6 1.9 2 0 0 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 DUF2117 PF09890.9 gi|452211518|ref|YP_007491632.1| - 5.5e-68 228.6 0.0 7.1e-68 228.2 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2117) MacB_PCD PF12704.7 gi|452211519|ref|YP_007491633.1| - 3.6e-20 73.2 0.0 3.6e-20 73.2 0.0 1.5 2 0 0 2 2 2 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|452211519|ref|YP_007491633.1| - 7.4e-14 52.0 2.3 7.4e-14 52.0 2.3 3.0 3 0 0 3 3 3 1 FtsX-like permease family SUR7 PF06687.12 gi|452211519|ref|YP_007491633.1| - 1.2 8.7 4.7 0.21 11.2 0.8 1.7 2 1 0 2 2 2 0 SUR7/PalI family DUF3344 PF11824.8 gi|452211520|ref|YP_007491634.1| - 7.3e-28 97.9 2.1 8.7e-28 97.7 2.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3344) MetallophosC PF16370.5 gi|452211520|ref|YP_007491634.1| - 0.075 13.3 0.0 0.22 11.8 0.0 1.7 2 0 0 2 2 2 0 C terminal of Calcineurin-like phosphoesterase NPCBM_assoc PF10633.9 gi|452211521|ref|YP_007491635.1| - 0.013 15.8 0.0 4 7.8 0.0 2.9 2 1 1 3 3 3 0 NPCBM-associated, NEW3 domain of alpha-galactosidase ABC_cobalt PF09819.9 gi|452211521|ref|YP_007491635.1| - 0.73 10.0 20.4 0.076 13.2 13.9 2.5 2 1 1 3 3 3 0 ABC-type cobalt transport system, permease component ABC_tran PF00005.27 gi|452211522|ref|YP_007491636.1| - 1.2e-61 207.2 0.1 2.4e-32 112.3 0.0 2.6 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 gi|452211522|ref|YP_007491636.1| - 1.7e-11 44.5 8.6 0.0031 17.4 0.2 4.2 2 2 2 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|452211522|ref|YP_007491636.1| - 9.6e-11 41.5 0.3 0.00021 20.8 0.2 3.5 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|452211522|ref|YP_007491636.1| - 1.1e-10 42.2 0.6 8.7e-05 23.0 0.1 2.7 2 2 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.6 gi|452211522|ref|YP_007491636.1| - 2e-08 34.6 0.5 0.0027 18.0 0.2 3.3 2 2 0 2 2 2 2 AAA domain AAA_29 PF13555.6 gi|452211522|ref|YP_007491636.1| - 1.3e-07 31.2 0.0 0.0027 17.4 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|452211522|ref|YP_007491636.1| - 1.9e-07 31.2 0.0 0.0013 18.7 0.0 2.4 2 0 0 2 2 2 2 RsgA GTPase AAA_25 PF13481.6 gi|452211522|ref|YP_007491636.1| - 2.1e-07 30.7 0.6 0.014 15.0 0.0 3.9 4 1 0 4 4 4 2 AAA domain AAA_23 PF13476.6 gi|452211522|ref|YP_007491636.1| - 3.2e-06 27.8 0.1 0.037 14.5 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_33 PF13671.6 gi|452211522|ref|YP_007491636.1| - 1.3e-05 25.4 0.1 0.2 11.8 0.0 2.8 3 0 0 3 3 2 2 AAA domain AAA PF00004.29 gi|452211522|ref|YP_007491636.1| - 1.6e-05 25.4 0.6 0.053 14.0 0.0 3.5 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 gi|452211522|ref|YP_007491636.1| - 1.7e-05 24.8 1.0 0.0011 18.9 0.1 2.8 3 0 0 3 3 3 1 Rad17 P-loop domain NACHT PF05729.12 gi|452211522|ref|YP_007491636.1| - 3.9e-05 23.6 0.3 0.49 10.3 0.0 3.1 3 0 0 3 3 2 2 NACHT domain AAA_5 PF07728.14 gi|452211522|ref|YP_007491636.1| - 4.5e-05 23.5 0.2 0.076 13.0 0.1 3.0 3 0 0 3 3 2 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 gi|452211522|ref|YP_007491636.1| - 4.5e-05 22.9 0.1 0.013 14.9 0.0 2.6 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_15 PF13175.6 gi|452211522|ref|YP_007491636.1| - 8e-05 22.5 0.2 0.15 11.8 0.1 2.3 2 0 0 2 2 2 2 AAA ATPase domain AAA_18 PF13238.6 gi|452211522|ref|YP_007491636.1| - 0.00013 22.5 3.7 0.039 14.5 0.0 3.3 4 1 0 4 4 2 1 AAA domain AAA_24 PF13479.6 gi|452211522|ref|YP_007491636.1| - 0.00015 21.5 0.4 3.2 7.4 0.0 3.9 5 0 0 5 5 4 1 AAA domain ABC_ATPase PF09818.9 gi|452211522|ref|YP_007491636.1| - 0.00022 20.2 0.0 0.35 9.6 0.0 3.2 3 0 0 3 3 3 1 Predicted ATPase of the ABC class TsaE PF02367.17 gi|452211522|ref|YP_007491636.1| - 0.00025 21.1 0.0 1.2 9.2 0.0 2.5 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE TniB PF05621.11 gi|452211522|ref|YP_007491636.1| - 0.00028 20.4 2.3 2.4 7.6 0.0 4.7 3 2 2 5 5 5 1 Bacterial TniB protein RNA_helicase PF00910.22 gi|452211522|ref|YP_007491636.1| - 0.001 19.5 0.1 0.45 10.9 0.0 2.4 2 0 0 2 2 2 1 RNA helicase AAA_30 PF13604.6 gi|452211522|ref|YP_007491636.1| - 0.0012 18.7 0.1 1.1 8.9 0.0 2.6 2 1 0 2 2 2 1 AAA domain AAA_7 PF12775.7 gi|452211522|ref|YP_007491636.1| - 0.0015 18.1 0.0 0.49 9.9 0.0 2.3 2 0 0 2 2 2 1 P-loop containing dynein motor region NB-ARC PF00931.22 gi|452211522|ref|YP_007491636.1| - 0.0021 17.3 0.1 1.2 8.3 0.0 2.4 2 0 0 2 2 2 1 NB-ARC domain AAA_28 PF13521.6 gi|452211522|ref|YP_007491636.1| - 0.0036 17.5 0.4 1.3 9.3 0.0 2.9 3 0 0 3 3 3 1 AAA domain IstB_IS21 PF01695.17 gi|452211522|ref|YP_007491636.1| - 0.0043 16.8 0.1 3.7 7.2 0.0 3.0 3 0 0 3 3 3 0 IstB-like ATP binding protein Zeta_toxin PF06414.12 gi|452211522|ref|YP_007491636.1| - 0.0046 16.3 0.0 0.8 8.9 0.0 2.5 2 0 0 2 2 2 1 Zeta toxin G-alpha PF00503.20 gi|452211522|ref|YP_007491636.1| - 0.0051 16.0 0.1 1.9 7.6 0.0 2.2 2 0 0 2 2 2 1 G-protein alpha subunit SbcCD_C PF13558.6 gi|452211522|ref|YP_007491636.1| - 0.0051 17.0 1.2 0.74 10.1 0.0 3.8 3 2 0 3 3 2 1 Putative exonuclease SbcCD, C subunit APS_kinase PF01583.20 gi|452211522|ref|YP_007491636.1| - 0.0066 16.4 0.1 5 7.0 0.0 2.3 2 0 0 2 2 2 0 Adenylylsulphate kinase AAA_14 PF13173.6 gi|452211522|ref|YP_007491636.1| - 0.0075 16.3 0.1 7.9 6.5 0.0 2.9 3 0 0 3 3 2 0 AAA domain SRP54 PF00448.22 gi|452211522|ref|YP_007491636.1| - 0.012 15.2 0.0 0.31 10.6 0.0 2.3 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain DUF815 PF05673.13 gi|452211522|ref|YP_007491636.1| - 0.021 14.0 0.1 0.069 12.3 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF815) HeH PF12949.7 gi|452211522|ref|YP_007491636.1| - 0.023 14.4 0.0 0.068 12.9 0.0 1.8 1 0 0 1 1 1 0 HeH/LEM domain ATPase_2 PF01637.18 gi|452211522|ref|YP_007491636.1| - 0.036 14.0 0.1 1.5 8.7 0.0 2.5 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea Sigma54_activat PF00158.26 gi|452211522|ref|YP_007491636.1| - 0.039 13.7 0.0 6 6.5 0.0 2.6 2 0 0 2 2 2 0 Sigma-54 interaction domain T2SSE PF00437.20 gi|452211522|ref|YP_007491636.1| - 0.04 13.0 0.0 3.6 6.6 0.0 2.5 2 0 0 2 2 2 0 Type II/IV secretion system protein PduV-EutP PF10662.9 gi|452211522|ref|YP_007491636.1| - 0.045 13.5 0.0 5.6 6.7 0.0 2.3 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation NTPase_1 PF03266.15 gi|452211522|ref|YP_007491636.1| - 0.052 13.5 0.7 5 7.0 0.0 3.2 3 0 0 3 3 3 0 NTPase cobW PF02492.19 gi|452211522|ref|YP_007491636.1| - 0.057 13.0 0.4 5.4 6.6 0.1 2.7 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain SAP PF02037.27 gi|452211522|ref|YP_007491636.1| - 0.058 13.2 0.0 0.37 10.6 0.0 2.4 2 0 0 2 2 2 0 SAP domain MMR_HSR1 PF01926.23 gi|452211522|ref|YP_007491636.1| - 0.07 13.2 0.7 6 7.0 0.1 2.6 2 0 0 2 2 2 0 50S ribosome-binding GTPase Roc PF08477.13 gi|452211522|ref|YP_007491636.1| - 0.077 13.2 0.1 5.1 7.3 0.0 2.4 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase GTP_EFTU PF00009.27 gi|452211522|ref|YP_007491636.1| - 0.11 12.0 0.1 0.66 9.5 0.0 2.1 3 0 0 3 3 2 0 Elongation factor Tu GTP binding domain ATP_bind_1 PF03029.17 gi|452211522|ref|YP_007491636.1| - 0.12 12.2 0.1 16 5.2 0.0 2.4 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_27 PF13514.6 gi|452211522|ref|YP_007491636.1| - 0.13 11.8 0.0 4.2 6.9 0.0 2.2 2 0 0 2 2 2 0 AAA domain CPT PF07931.12 gi|452211522|ref|YP_007491636.1| - 0.14 12.0 0.0 0.52 10.1 0.0 1.9 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein AAA_19 PF13245.6 gi|452211522|ref|YP_007491636.1| - 0.17 12.2 0.2 7 7.0 0.0 2.7 3 0 0 3 3 2 0 AAA domain DUF87 PF01935.17 gi|452211522|ref|YP_007491636.1| - 0.98 9.5 3.2 27 4.8 0.8 3.1 2 1 0 2 2 2 0 Helicase HerA, central domain CbiQ PF02361.16 gi|452211523|ref|YP_007491637.1| - 3.2e-25 89.0 8.6 4.8e-25 88.5 8.6 1.2 1 0 0 1 1 1 1 Cobalt transport protein DUF3344 PF11824.8 gi|452211524|ref|YP_007491638.1| - 5.5e-68 229.6 1.0 6.8e-68 229.3 1.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3344) WW_1 PF18507.1 gi|452211524|ref|YP_007491638.1| - 0.1 12.3 0.6 0.29 10.9 0.0 2.1 2 0 0 2 2 2 0 WW domain DUF3344 PF11824.8 gi|452211525|ref|YP_007491639.1| - 6.8e-40 137.4 0.4 1.5e-39 136.3 0.1 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF3344) CARDB PF07705.11 gi|452211525|ref|YP_007491639.1| - 4.5e-34 116.8 2.4 3.1e-19 69.1 5.2 2.5 2 0 0 2 2 2 2 CARDB Lysyl_oxidase PF01186.17 gi|452211525|ref|YP_007491639.1| - 0.00035 20.3 2.3 0.062 13.0 1.3 2.3 2 0 0 2 2 2 2 Lysyl oxidase EF-hand_5 PF13202.6 gi|452211525|ref|YP_007491639.1| - 0.085 12.4 2.5 0.31 10.6 2.5 1.9 1 0 0 1 1 1 0 EF hand EF-hand_1 PF00036.32 gi|452211525|ref|YP_007491639.1| - 0.17 11.5 1.1 0.62 9.8 1.1 2.0 1 0 0 1 1 1 0 EF hand DUF3344 PF11824.8 gi|452211526|ref|YP_007491640.1| - 8.4e-69 232.3 2.5 9.6e-69 232.1 2.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3344) ABC_tran PF00005.27 gi|452211527|ref|YP_007491641.1| - 3.3e-33 115.1 0.0 4.5e-33 114.7 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|452211527|ref|YP_007491641.1| - 2.2e-08 33.8 0.1 1.6e-05 24.4 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|452211527|ref|YP_007491641.1| - 6.4e-08 32.8 0.0 0.0032 17.3 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system RsgA_GTPase PF03193.16 gi|452211527|ref|YP_007491641.1| - 0.0001 22.3 0.0 0.00017 21.5 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 gi|452211527|ref|YP_007491641.1| - 0.00011 21.9 0.0 0.00062 19.5 0.0 2.0 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|452211527|ref|YP_007491641.1| - 0.00016 22.1 0.0 0.00025 21.5 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_15 PF13175.6 gi|452211527|ref|YP_007491641.1| - 0.0063 16.3 0.0 0.37 10.4 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain AAA PF00004.29 gi|452211527|ref|YP_007491641.1| - 0.065 13.7 0.2 1.9 8.9 0.2 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|452211527|ref|YP_007491641.1| - 0.095 13.0 0.0 0.57 10.5 0.0 2.0 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 gi|452211527|ref|YP_007491641.1| - 0.11 11.7 0.1 0.32 10.1 0.0 1.7 2 0 0 2 2 2 0 NB-ARC domain ATPase_2 PF01637.18 gi|452211527|ref|YP_007491641.1| - 0.11 12.4 0.0 0.2 11.5 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_33 PF13671.6 gi|452211527|ref|YP_007491641.1| - 0.2 11.8 0.5 0.28 11.4 0.5 1.7 1 1 0 1 1 1 0 AAA domain UPF0180 PF03698.13 gi|452211528|ref|YP_007491642.1| - 0.12 12.5 0.0 0.21 11.8 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0180) DUF3344 PF11824.8 gi|452211531|ref|YP_007491645.1| - 2.7e-128 427.4 34.9 1.9e-70 237.6 12.2 3.5 4 0 0 4 4 4 2 Protein of unknown function (DUF3344) CARDB PF07705.11 gi|452211531|ref|YP_007491645.1| - 2.3e-19 69.6 2.3 2.3e-19 69.6 2.3 4.3 4 1 0 4 4 4 1 CARDB MBG_2 PF18676.1 gi|452211532|ref|YP_007491646.1| - 0.14 12.8 0.3 0.14 12.8 0.3 2.6 3 0 0 3 3 3 0 MBG domain (YGX type) Lactonase PF10282.9 gi|452211533|ref|YP_007491647.1| - 6.8e-17 61.7 9.3 1.8e-07 30.8 0.4 3.4 1 1 2 3 3 3 3 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.16 gi|452211533|ref|YP_007491647.1| - 5.8e-16 58.0 10.2 3.7e-06 25.7 0.8 3.2 1 1 2 3 3 3 3 Cytochrome D1 heme domain SGL PF08450.12 gi|452211533|ref|YP_007491647.1| - 4e-11 43.0 13.3 0.0013 18.4 2.4 4.8 1 1 3 4 4 4 4 SMP-30/Gluconolactonase/LRE-like region NHL PF01436.21 gi|452211533|ref|YP_007491647.1| - 9.6e-11 41.2 20.4 0.048 13.7 0.2 7.0 6 0 0 6 6 6 4 NHL repeat Arylesterase PF01731.20 gi|452211533|ref|YP_007491647.1| - 6.5e-10 39.1 15.6 0.076 13.2 0.1 6.7 1 1 5 6 6 6 4 Arylesterase PD40 PF07676.12 gi|452211533|ref|YP_007491647.1| - 3.9e-06 26.7 0.1 3.8 7.6 0.0 6.1 7 0 0 7 7 7 2 WD40-like Beta Propeller Repeat Glu_cyclase_2 PF05096.12 gi|452211533|ref|YP_007491647.1| - 0.00013 21.5 0.3 0.014 14.9 0.0 2.6 1 1 1 2 2 2 1 Glutamine cyclotransferase PQQ_2 PF13360.6 gi|452211533|ref|YP_007491647.1| - 0.00028 20.6 10.2 0.01 15.4 2.8 2.7 1 1 1 2 2 2 2 PQQ-like domain Str_synth PF03088.16 gi|452211533|ref|YP_007491647.1| - 0.0005 20.1 0.2 22 5.2 0.0 5.2 4 2 2 6 6 6 0 Strictosidine synthase DUF1513 PF07433.11 gi|452211533|ref|YP_007491647.1| - 0.00063 18.9 4.6 0.01 14.9 0.2 3.2 2 1 1 4 4 4 1 Protein of unknown function (DUF1513) CUB PF00431.20 gi|452211533|ref|YP_007491647.1| - 0.0016 18.8 3.3 1.2 9.5 0.1 3.2 2 1 1 3 3 3 2 CUB domain Arm-DNA-bind_3 PF13356.6 gi|452211533|ref|YP_007491647.1| - 0.034 14.5 0.0 41 4.6 0.0 4.6 1 1 2 3 3 3 0 Arm DNA-binding domain Svf1 PF08622.10 gi|452211533|ref|YP_007491647.1| - 0.15 12.1 3.4 28 4.7 0.5 4.3 1 1 2 3 3 3 0 Svf1-like N-terminal lipocalin domain LOR PF04525.12 gi|452211533|ref|YP_007491647.1| - 0.18 11.4 5.7 4.8 6.7 0.1 3.9 3 1 1 4 4 4 0 LURP-one-related DUF5605 PF18310.1 gi|452211533|ref|YP_007491647.1| - 2.9 7.9 7.4 43 4.1 0.1 4.6 4 1 1 5 5 5 0 Domain of unknown function (DUF5605) Pathogen_betaC1 PF09593.10 gi|452211534|ref|YP_007491648.1| - 0.091 12.7 0.1 0.091 12.7 0.1 1.0 1 0 0 1 1 1 0 Beta-satellite pathogenicity beta C1 protein dCMP_cyt_deam_1 PF00383.23 gi|452211535|ref|YP_007491649.1| - 4e-18 65.1 0.0 5.7e-18 64.7 0.0 1.2 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 gi|452211535|ref|YP_007491649.1| - 4.3e-12 45.9 0.0 5.7e-12 45.6 0.0 1.1 1 0 0 1 1 1 1 MafB19-like deaminase Bd3614-deam PF14439.6 gi|452211535|ref|YP_007491649.1| - 0.024 14.7 0.0 0.042 13.9 0.0 1.4 1 0 0 1 1 1 0 Bd3614-like deaminase Glyoxalase PF00903.25 gi|452211536|ref|YP_007491650.1| - 0.0036 17.5 0.0 0.0039 17.4 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PBP3 PF18056.1 gi|452211536|ref|YP_007491650.1| - 0.19 11.8 0.0 0.21 11.7 0.0 1.1 1 0 0 1 1 1 0 Penicillin Binding Protein 3 Domain CxxCxxCC PF03692.15 gi|452211539|ref|YP_007491653.1| - 5.3e-09 36.7 7.2 8.7e-09 36.0 6.7 1.7 1 1 0 1 1 1 1 Putative zinc- or iron-chelating domain DUF148 PF02520.17 gi|452211539|ref|YP_007491653.1| - 0.06 13.5 1.1 0.44 10.7 0.2 2.2 2 0 0 2 2 2 0 Domain of unknown function DUF148 zf-CDGSH PF09360.10 gi|452211540|ref|YP_007491654.1| - 1.3e-38 130.9 2.5 2.2e-19 69.4 0.3 2.6 2 0 0 2 2 2 2 Iron-binding zinc finger CDGSH type Fer4_19 PF06902.11 gi|452211540|ref|YP_007491654.1| - 3.3e-12 46.3 0.0 8.5e-12 45.0 0.0 1.7 1 0 0 1 1 1 1 Divergent 4Fe-4S mono-cluster zf-UBR PF02207.20 gi|452211540|ref|YP_007491654.1| - 0.15 12.2 2.6 14 6.0 0.1 2.5 2 0 0 2 2 2 0 Putative zinc finger in N-recognin (UBR box) FrhB_FdhB_N PF04422.13 gi|452211541|ref|YP_007491655.1| - 4.8e-31 106.7 0.0 8.7e-31 105.9 0.0 1.4 2 0 0 2 2 2 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term FrhB_FdhB_C PF04432.13 gi|452211541|ref|YP_007491655.1| - 0.021 14.7 0.1 0.031 14.1 0.1 1.3 1 0 0 1 1 1 0 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus Oxidored_q6 PF01058.22 gi|452211542|ref|YP_007491656.1| - 4.2e-28 97.8 0.2 4.2e-28 97.8 0.2 2.3 2 0 0 2 2 2 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Fer4 PF00037.27 gi|452211542|ref|YP_007491656.1| - 1.3e-12 46.9 16.2 8.1e-08 31.8 3.6 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|452211542|ref|YP_007491656.1| - 1.4e-08 34.7 10.3 4.3e-08 33.2 7.9 2.6 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|452211542|ref|YP_007491656.1| - 1.4e-07 31.5 21.6 7e-07 29.3 11.5 3.2 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|452211542|ref|YP_007491656.1| - 3.3e-07 30.8 14.3 6.1e-07 29.9 10.3 2.9 2 2 0 2 2 2 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|452211542|ref|YP_007491656.1| - 3.8e-07 29.9 17.9 6.7e-05 22.8 2.8 2.9 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|452211542|ref|YP_007491656.1| - 9.9e-07 29.6 9.5 0.0067 17.3 1.9 3.3 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|452211542|ref|YP_007491656.1| - 2.2e-06 27.7 13.2 0.00035 20.6 12.0 3.4 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|452211542|ref|YP_007491656.1| - 4.2e-06 26.9 18.0 0.0036 17.7 1.7 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|452211542|ref|YP_007491656.1| - 9.1e-06 25.5 17.3 0.0028 17.7 3.0 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|452211542|ref|YP_007491656.1| - 0.0016 18.9 14.3 0.14 12.7 2.8 3.2 2 1 2 4 4 3 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|452211542|ref|YP_007491656.1| - 0.0074 16.8 16.3 0.22 12.1 2.2 3.2 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|452211542|ref|YP_007491656.1| - 0.02 15.4 16.3 0.076 13.6 1.3 3.5 3 1 1 4 4 4 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 gi|452211542|ref|YP_007491656.1| - 0.037 14.9 15.1 0.47 11.3 3.2 3.7 4 0 0 4 4 4 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|452211542|ref|YP_007491656.1| - 0.1 13.6 6.3 0.1 13.6 6.3 3.7 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|452211542|ref|YP_007491656.1| - 0.11 12.7 9.2 0.33 11.2 9.2 1.7 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|452211542|ref|YP_007491656.1| - 1.9 9.3 15.7 4.8 8.0 0.6 3.9 3 1 1 4 4 4 0 4Fe-4S single cluster domain HycI PF01750.18 gi|452211543|ref|YP_007491657.1| - 3.4e-33 114.2 0.0 4.3e-33 113.9 0.0 1.1 1 0 0 1 1 1 1 Hydrogenase maturation protease NiFeSe_Hases PF00374.19 gi|452211544|ref|YP_007491658.1| - 7.8e-19 67.9 9.1 1.3e-10 40.9 2.1 4.5 2 1 1 3 3 3 3 Nickel-dependent hydrogenase Complex1_49kDa PF00346.19 gi|452211544|ref|YP_007491658.1| - 0.011 14.9 0.0 0.021 13.9 0.0 1.5 1 0 0 1 1 1 0 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DDE_Tnp_1 PF01609.21 gi|452211545|ref|YP_007491659.1| - 3.1e-12 46.6 0.9 4.8e-12 46.0 0.9 1.3 1 0 0 1 1 1 1 Transposase DDE domain DUF2603 PF10788.9 gi|452211545|ref|YP_007491659.1| - 0.0041 17.2 0.2 0.015 15.4 0.0 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF2603) DDE_Tnp_1_4 PF13701.6 gi|452211545|ref|YP_007491659.1| - 0.025 12.8 1.3 0.062 11.5 1.3 1.6 1 1 0 1 1 1 0 Transposase DDE domain group 1 Prenyltrans PF00432.21 gi|452211546|ref|YP_007491660.1| - 9.7e-07 28.4 0.0 1.6e-06 27.7 0.0 1.4 1 0 0 1 1 1 1 Prenyltransferase and squalene oxidase repeat SQHop_cyclase_C PF13243.6 gi|452211546|ref|YP_007491660.1| - 0.00046 19.4 0.0 0.00063 18.9 0.0 1.1 1 0 0 1 1 1 1 Squalene-hopene cyclase C-terminal domain TED_complement PF07678.14 gi|452211546|ref|YP_007491660.1| - 0.008 15.2 0.0 0.0099 14.9 0.0 1.1 1 0 0 1 1 1 1 A-macroglobulin TED domain SQHop_cyclase_N PF13249.6 gi|452211546|ref|YP_007491660.1| - 0.012 14.7 0.0 0.017 14.2 0.0 1.2 1 0 0 1 1 1 0 Squalene-hopene cyclase N-terminal domain LTD PF00932.19 gi|452211548|ref|YP_007491662.1| - 2.7e-21 76.0 2.9 3.8e-21 75.5 1.4 2.0 2 0 0 2 2 2 1 Lamin Tail Domain Lactamase_B PF00753.27 gi|452211548|ref|YP_007491662.1| - 1.4e-17 64.4 0.3 1.4e-17 64.4 0.3 2.0 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|452211548|ref|YP_007491662.1| - 9.5e-06 25.3 0.1 3.6e-05 23.4 0.0 1.9 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 gi|452211548|ref|YP_007491662.1| - 0.002 17.6 0.0 0.0035 16.8 0.0 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|452211548|ref|YP_007491662.1| - 0.07 13.0 0.0 0.13 12.1 0.0 1.5 1 0 0 1 1 1 0 Beta-lactamase superfamily domain DUF3006 PF11213.8 gi|452211549|ref|YP_007491663.1| - 6e-19 68.0 1.3 6.8e-19 67.9 1.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3006) CHS5_N PF16892.5 gi|452211549|ref|YP_007491663.1| - 0.00026 20.9 0.0 0.00033 20.6 0.0 1.2 1 0 0 1 1 1 1 Chitin biosynthesis protein CHS5 N-terminus FMN_red PF03358.15 gi|452211550|ref|YP_007491664.1| - 7.1e-30 103.8 0.0 8.3e-30 103.6 0.0 1.0 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|452211550|ref|YP_007491664.1| - 3.8e-14 52.9 0.0 5.7e-14 52.3 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold S_4TM PF18159.1 gi|452211553|ref|YP_007491667.1| - 0.25 10.6 0.0 0.31 10.3 0.0 1.1 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain Peptidase_S8 PF00082.22 gi|452211556|ref|YP_007491670.1| - 5e-09 35.8 0.4 1.2e-07 31.3 0.1 2.0 1 1 1 2 2 2 2 Subtilase family GPW_gp25 PF04965.14 gi|452211557|ref|YP_007491671.1| - 0.00039 20.1 0.2 0.77 9.6 0.1 2.2 1 1 1 2 2 2 2 Gene 25-like lysozyme LcrG PF07216.12 gi|452211557|ref|YP_007491671.1| - 0.12 12.3 0.0 0.26 11.2 0.0 1.6 1 1 0 1 1 1 0 LcrG protein Herpes_BTRF1 PF04682.12 gi|452211558|ref|YP_007491672.1| - 0.2 11.0 0.0 0.24 10.7 0.0 1.0 1 0 0 1 1 1 0 Herpesvirus BTRF1 protein conserved region Alpha_adaptinC2 PF02883.20 gi|452211560|ref|YP_007491674.1| - 0.028 14.7 0.0 0.038 14.3 0.0 1.1 1 0 0 1 1 1 0 Adaptin C-terminal domain PKD PF00801.20 gi|452211560|ref|YP_007491674.1| - 0.12 12.2 0.0 0.23 11.4 0.0 1.5 1 1 0 1 1 1 0 PKD domain Big_7 PF17957.1 gi|452211560|ref|YP_007491674.1| - 0.12 13.1 0.0 0.17 12.6 0.0 1.4 1 0 0 1 1 1 0 Bacterial Ig domain Fumerase PF05681.14 gi|452211561|ref|YP_007491675.1| - 2e-99 332.4 0.1 2.3e-99 332.2 0.1 1.0 1 0 0 1 1 1 1 Fumarate hydratase (Fumerase) DBI_PRT PF02277.17 gi|452211561|ref|YP_007491675.1| - 0.03 13.5 0.1 0.056 12.7 0.1 1.4 1 0 0 1 1 1 0 Phosphoribosyltransferase Phospholamban PF04272.14 gi|452211561|ref|YP_007491675.1| - 0.26 10.8 0.5 0.52 9.8 0.5 1.5 1 0 0 1 1 1 0 Phospholamban Fumerase_C PF05683.12 gi|452211562|ref|YP_007491676.1| - 7.8e-46 156.0 0.0 8.6e-46 155.9 0.0 1.0 1 0 0 1 1 1 1 Fumarase C-terminus DUF1724 PF08350.10 gi|452211563|ref|YP_007491677.1| - 6.2e-11 42.3 0.0 1.5e-10 41.0 0.0 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) HTH_5 PF01022.20 gi|452211563|ref|YP_007491677.1| - 4.5e-06 26.4 0.0 7.9e-06 25.6 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|452211563|ref|YP_007491677.1| - 0.00052 20.0 0.0 0.001 19.1 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.12 gi|452211563|ref|YP_007491677.1| - 0.0052 16.7 0.0 0.012 15.6 0.0 1.6 1 0 0 1 1 1 1 HTH domain Scm3 PF10384.9 gi|452211563|ref|YP_007491677.1| - 0.035 13.8 0.0 0.078 12.7 0.0 1.5 1 0 0 1 1 1 0 Centromere protein Scm3 Rrf2 PF02082.20 gi|452211563|ref|YP_007491677.1| - 0.061 13.7 0.0 0.12 12.7 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator MarR_2 PF12802.7 gi|452211563|ref|YP_007491677.1| - 0.074 13.0 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 MarR family E1-E2_ATPase PF00122.20 gi|452211564|ref|YP_007491678.1| - 6.4e-51 172.4 14.9 1.8e-50 171.0 3.8 3.3 3 0 0 3 3 3 2 E1-E2 ATPase Cation_ATPase_C PF00689.21 gi|452211564|ref|YP_007491678.1| - 2e-31 109.1 4.7 2e-31 109.1 4.7 2.6 3 0 0 3 3 3 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 gi|452211564|ref|YP_007491678.1| - 1.6e-20 74.3 6.8 8.5e-19 68.7 6.8 2.4 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 gi|452211564|ref|YP_007491678.1| - 2.6e-17 62.7 0.0 5.7e-17 61.6 0.0 1.5 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Hydrolase_3 PF08282.12 gi|452211564|ref|YP_007491678.1| - 1.3e-05 25.1 2.4 0.0017 18.1 1.3 2.2 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|452211564|ref|YP_007491678.1| - 0.0042 17.5 0.1 0.0097 16.3 0.1 1.6 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase TMEM125 PF15109.6 gi|452211564|ref|YP_007491678.1| - 0.038 14.3 0.2 0.12 12.8 0.2 1.8 1 0 0 1 1 1 0 TMEM125 protein family PPK2 PF03976.14 gi|452211566|ref|YP_007491680.1| - 2.6e-65 220.1 3.6 4.4e-65 219.4 3.6 1.3 1 0 0 1 1 1 1 Polyphosphate kinase 2 (PPK2) DUF308 PF03729.13 gi|452211567|ref|YP_007491681.1| - 1.2e-21 76.8 52.9 1.2e-10 41.6 20.5 3.1 3 0 0 3 3 3 3 Short repeat of unknown function (DUF308) NosD PF05048.13 gi|452211568|ref|YP_007491682.1| - 3.1e-83 278.7 107.3 1e-35 123.2 31.8 4.2 1 1 3 4 4 4 4 Periplasmic copper-binding protein (NosD) Lectin_like PF18560.1 gi|452211568|ref|YP_007491682.1| - 1.6e-59 200.6 0.5 4.7e-59 199.0 0.5 1.9 1 0 0 1 1 1 1 Lectin like domain Beta_helix PF13229.6 gi|452211568|ref|YP_007491682.1| - 1.7e-49 167.7 106.1 3.3e-18 66.0 25.8 4.6 2 1 2 4 4 4 4 Right handed beta helix region Peptidase_C1 PF00112.23 gi|452211568|ref|YP_007491682.1| - 3.1e-20 73.2 0.0 6.3e-20 72.2 0.0 1.4 1 0 0 1 1 1 1 Papain family cysteine protease PKD PF00801.20 gi|452211568|ref|YP_007491682.1| - 3.6e-11 42.7 0.6 3.6e-11 42.7 0.6 2.1 2 0 0 2 2 2 1 PKD domain TRP_2 PF08344.11 gi|452211568|ref|YP_007491682.1| - 0.041 14.1 0.4 0.31 11.3 0.0 2.3 2 0 0 2 2 2 0 Transient receptor ion channel II Ribo_biogen_C PF04034.13 gi|452211569|ref|YP_007491683.1| - 2.9e-47 159.5 0.0 3.5e-47 159.3 0.0 1.1 1 0 0 1 1 1 1 Ribosome biogenesis protein, C-terminal RLI PF04068.15 gi|452211569|ref|YP_007491683.1| - 6.7e-15 54.6 0.2 6.7e-15 54.6 0.2 1.8 2 0 0 2 2 2 1 Possible Fer4-like domain in RNase L inhibitor, RLI RNA_Me_trans PF04252.13 gi|452211569|ref|YP_007491683.1| - 0.024 14.2 0.0 0.039 13.5 0.0 1.3 1 0 0 1 1 1 0 Predicted SAM-dependent RNA methyltransferase DTW PF03942.15 gi|452211569|ref|YP_007491683.1| - 0.15 11.7 0.0 0.28 10.9 0.0 1.4 1 1 0 1 1 1 0 DTW domain ANF_receptor PF01094.28 gi|452211569|ref|YP_007491683.1| - 0.18 10.9 0.0 0.18 10.8 0.0 1.1 1 0 0 1 1 1 0 Receptor family ligand binding region LDcluster4 PF18306.1 gi|452211570|ref|YP_007491684.1| - 5.7e-46 156.0 3.7 6.6e-46 155.8 3.7 1.0 1 0 0 1 1 1 1 SLOG cluster4 family DNA_processg_A PF02481.15 gi|452211570|ref|YP_007491684.1| - 1.5e-09 37.4 0.5 9e-07 28.4 0.3 2.0 2 0 0 2 2 2 2 DNA recombination-mediator protein A Lysine_decarbox PF03641.14 gi|452211570|ref|YP_007491684.1| - 2.6e-06 27.6 0.0 2.6e-06 27.6 0.0 1.7 2 0 0 2 2 2 1 Possible lysine decarboxylase Topoisom_bac PF01131.20 gi|452211571|ref|YP_007491685.1| - 3.3e-123 411.8 0.0 4.4e-123 411.4 0.0 1.2 1 0 0 1 1 1 1 DNA topoisomerase Toprim PF01751.22 gi|452211571|ref|YP_007491685.1| - 4.1e-15 55.8 1.2 7.9e-15 54.9 0.2 2.1 2 0 0 2 2 2 1 Toprim domain zf-C4_Topoisom PF01396.19 gi|452211571|ref|YP_007491685.1| - 1e-13 50.8 4.9 1.1e-13 50.7 1.2 2.4 2 0 0 2 2 2 1 Topoisomerase DNA binding C4 zinc finger HHH_5 PF14520.6 gi|452211571|ref|YP_007491685.1| - 4e-07 30.5 0.5 2.1e-06 28.2 0.5 2.2 1 0 0 1 1 1 1 Helix-hairpin-helix domain Cdd1 PF11731.8 gi|452211571|ref|YP_007491685.1| - 0.00021 21.4 0.0 0.00051 20.2 0.0 1.7 1 0 0 1 1 1 1 Pathogenicity locus DUF4332 PF14229.6 gi|452211571|ref|YP_007491685.1| - 0.0003 21.0 0.0 0.00068 19.9 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4332) HEXIM PF15313.6 gi|452211571|ref|YP_007491685.1| - 0.0039 17.4 0.2 4.3 7.5 0.0 2.5 2 0 0 2 2 2 2 Hexamethylene bis-acetamide-inducible protein Cas_TM1802 PF09484.10 gi|452211571|ref|YP_007491685.1| - 0.018 13.8 0.1 0.032 13.0 0.1 1.3 1 0 0 1 1 1 0 CRISPR-associated protein TM1802 (cas_TM1802) DNA_pol_lambd_f PF10391.9 gi|452211571|ref|YP_007491685.1| - 0.035 13.9 0.0 0.096 12.5 0.0 1.8 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda TfoX_C PF04994.13 gi|452211571|ref|YP_007491685.1| - 0.049 13.7 0.0 0.13 12.4 0.0 1.7 1 0 0 1 1 1 0 TfoX C-terminal domain DUF2283 PF10049.9 gi|452211571|ref|YP_007491685.1| - 0.088 13.0 0.4 0.31 11.3 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2283) BAF PF02961.14 gi|452211571|ref|YP_007491685.1| - 0.15 12.5 0.3 1.1 9.8 0.1 2.2 2 0 0 2 2 2 0 Barrier to autointegration factor zf-Sec23_Sec24 PF04810.15 gi|452211572|ref|YP_007491686.1| - 0.02 14.9 0.1 0.026 14.6 0.1 1.1 1 0 0 1 1 1 0 Sec23/Sec24 zinc finger ACR_tran PF00873.19 gi|452211573|ref|YP_007491687.1| - 0.042 11.5 0.1 0.042 11.5 0.1 1.0 1 0 0 1 1 1 0 AcrB/AcrD/AcrF family SKG6 PF08693.10 gi|452211573|ref|YP_007491687.1| - 5.5 6.5 6.3 0.7 9.4 2.4 1.6 2 0 0 2 2 2 0 Transmembrane alpha-helix domain Usp PF00582.26 gi|452211574|ref|YP_007491688.1| - 3.1e-38 131.5 0.4 3.4e-38 131.3 0.4 1.0 1 0 0 1 1 1 1 Universal stress protein family B12-binding PF02310.19 gi|452211574|ref|YP_007491688.1| - 0.038 14.0 0.0 0.062 13.3 0.0 1.5 1 1 0 1 1 1 0 B12 binding domain Dynamin_N PF00350.23 gi|452211574|ref|YP_007491688.1| - 0.06 13.4 0.1 0.078 13.0 0.1 1.3 1 0 0 1 1 1 0 Dynamin family Asparaginase_C PF17763.1 gi|452211574|ref|YP_007491688.1| - 0.078 13.2 0.6 10 6.3 0.1 2.1 2 0 0 2 2 2 0 Glutaminase/Asparaginase C-terminal domain Nitro_FeMo-Co PF02579.17 gi|452211574|ref|YP_007491688.1| - 0.14 12.5 0.5 3.2 8.1 0.0 2.5 2 1 0 2 2 2 0 Dinitrogenase iron-molybdenum cofactor Beta-Casp PF10996.8 gi|452211575|ref|YP_007491689.1| - 6.9e-14 52.1 0.0 1.7e-13 50.8 0.0 1.7 2 0 0 2 2 2 1 Beta-Casp domain RMMBL PF07521.12 gi|452211575|ref|YP_007491689.1| - 2.3e-12 46.7 0.1 4.4e-11 42.6 0.0 2.3 2 0 0 2 2 2 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_2 PF12706.7 gi|452211575|ref|YP_007491689.1| - 1.2e-07 31.5 0.0 2.2e-07 30.6 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|452211575|ref|YP_007491689.1| - 4.3e-07 30.2 0.0 7.9e-05 22.8 0.0 2.3 2 0 0 2 2 2 2 Metallo-beta-lactamase superfamily Lactamase_B_6 PF16661.5 gi|452211575|ref|YP_007491689.1| - 2.6e-05 23.7 0.0 5.3e-05 22.7 0.0 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|452211575|ref|YP_007491689.1| - 0.0015 18.4 0.0 0.0049 16.8 0.0 1.8 1 1 0 1 1 1 1 Beta-lactamase superfamily domain DUF460 PF04312.13 gi|452211577|ref|YP_007491691.1| - 2.6e-45 153.6 0.1 7.6e-45 152.1 0.1 1.9 1 0 0 1 1 1 1 Protein of unknown function (DUF460) DUF677 PF05055.12 gi|452211577|ref|YP_007491691.1| - 0.0079 15.1 7.1 0.014 14.3 7.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF677) acVLRF1 PF18859.1 gi|452211577|ref|YP_007491691.1| - 0.012 15.9 0.2 0.012 15.9 0.2 2.7 3 0 0 3 3 3 0 Actinobacteria/chloroflexi VLRF1 release factor Atg14 PF10186.9 gi|452211577|ref|YP_007491691.1| - 0.013 14.6 13.4 0.026 13.6 13.4 1.4 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Fib_alpha PF08702.10 gi|452211577|ref|YP_007491691.1| - 0.013 15.6 2.2 0.013 15.6 2.2 2.0 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Exonuc_VII_L PF02601.15 gi|452211577|ref|YP_007491691.1| - 0.034 13.7 5.9 0.064 12.8 5.9 1.5 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF2703 PF10865.8 gi|452211577|ref|YP_007491691.1| - 0.067 13.4 0.5 0.15 12.3 0.5 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF2703) SlyX PF04102.12 gi|452211577|ref|YP_007491691.1| - 0.068 13.8 8.4 4.5 8.0 3.7 3.1 1 1 1 2 2 2 0 SlyX Herpes_UL6 PF01763.16 gi|452211577|ref|YP_007491691.1| - 0.15 10.5 6.7 0.22 10.0 6.7 1.2 1 0 0 1 1 1 0 Herpesvirus UL6 like FAM76 PF16046.5 gi|452211577|ref|YP_007491691.1| - 0.28 10.5 12.4 0.48 9.7 12.4 1.4 1 0 0 1 1 1 0 FAM76 protein TMPIT PF07851.13 gi|452211577|ref|YP_007491691.1| - 0.3 10.3 9.7 0.47 9.7 9.7 1.3 1 0 0 1 1 1 0 TMPIT-like protein DUF16 PF01519.16 gi|452211577|ref|YP_007491691.1| - 0.31 11.5 15.3 0.15 12.6 5.0 2.7 1 1 1 2 2 2 0 Protein of unknown function DUF16 VPS38 PF17649.1 gi|452211577|ref|YP_007491691.1| - 0.45 9.3 7.8 0.8 8.5 7.8 1.3 1 0 0 1 1 1 0 Vacuolar protein sorting 38 L31 PF09784.9 gi|452211577|ref|YP_007491691.1| - 0.96 9.9 9.5 13 6.3 1.8 3.0 1 1 1 2 2 2 0 Mitochondrial ribosomal protein L31 XLF PF09302.11 gi|452211577|ref|YP_007491691.1| - 1.1 9.4 6.8 0.25 11.5 0.9 2.3 1 1 1 2 2 2 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component BLOC1_2 PF10046.9 gi|452211577|ref|YP_007491691.1| - 1.6 9.1 10.8 0.54 10.6 2.5 2.7 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF1664 PF07889.12 gi|452211577|ref|YP_007491691.1| - 3.4 7.7 7.4 1 9.4 1.2 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) KASH_CCD PF14662.6 gi|452211577|ref|YP_007491691.1| - 3.8 7.3 17.6 0.93 9.3 11.7 2.2 2 0 0 2 2 2 0 Coiled-coil region of CCDC155 or KASH Spc29 PF17082.5 gi|452211577|ref|YP_007491691.1| - 4.1 7.2 12.8 12 5.7 3.6 2.3 1 1 1 2 2 2 0 Spindle Pole Component 29 CREPT PF16566.5 gi|452211577|ref|YP_007491691.1| - 4.2 7.5 17.2 12 6.1 0.0 3.1 3 1 0 3 3 3 0 Cell-cycle alteration and expression-elevated protein in tumour P4Ha_N PF08336.11 gi|452211577|ref|YP_007491691.1| - 7.1 6.6 9.6 1.3 9.1 2.0 2.7 1 1 1 2 2 2 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region DUF641 PF04859.12 gi|452211577|ref|YP_007491691.1| - 8.4 6.7 18.7 0.92 9.9 4.9 2.9 2 1 1 3 3 2 0 Plant protein of unknown function (DUF641) RIO1 PF01163.22 gi|452211578|ref|YP_007491692.1| - 4.9e-44 150.2 0.1 4.9e-44 150.2 0.1 1.4 2 0 0 2 2 2 1 RIO1 family Rio2_N PF09202.11 gi|452211578|ref|YP_007491692.1| - 1.1e-28 99.2 0.0 2.6e-28 98.0 0.0 1.6 1 0 0 1 1 1 1 Rio2, N-terminal Pkinase PF00069.25 gi|452211578|ref|YP_007491692.1| - 0.00012 21.5 0.2 0.00044 19.7 0.0 2.0 2 1 0 2 2 2 1 Protein kinase domain APH PF01636.23 gi|452211578|ref|YP_007491692.1| - 0.00073 19.5 0.1 0.019 14.9 0.0 2.2 1 1 1 2 2 2 1 Phosphotransferase enzyme family HTH_27 PF13463.6 gi|452211578|ref|YP_007491692.1| - 0.1 13.1 0.0 0.91 10.1 0.0 2.5 3 0 0 3 3 3 0 Winged helix DNA-binding domain Fzo_mitofusin PF04799.13 gi|452211578|ref|YP_007491692.1| - 0.22 11.1 1.2 0.35 10.4 1.2 1.2 1 0 0 1 1 1 0 fzo-like conserved region zf-C2H2_aberr PF17017.5 gi|452211578|ref|YP_007491692.1| - 0.43 10.7 5.1 0.8 9.8 3.3 2.0 2 0 0 2 2 2 0 Aberrant zinc-finger AAA_11 PF13086.6 gi|452211578|ref|YP_007491692.1| - 0.67 9.7 3.2 18 5.0 3.2 2.1 2 0 0 2 2 2 0 AAA domain LRR_5 PF13306.6 gi|452211579|ref|YP_007491693.1| - 0.0058 16.6 0.1 0.011 15.7 0.1 1.4 1 0 0 1 1 1 1 BspA type Leucine rich repeat region (6 copies) LRR_4 PF12799.7 gi|452211579|ref|YP_007491693.1| - 0.19 12.2 15.7 2.8 8.5 0.0 5.0 3 2 1 5 5 5 0 Leucine Rich repeats (2 copies) DJ-1_PfpI PF01965.24 gi|452211585|ref|YP_007491699.1| - 7.3e-48 162.5 0.0 8e-48 162.3 0.0 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family GATase PF00117.28 gi|452211585|ref|YP_007491699.1| - 2.2e-05 24.3 0.0 2.4e-05 24.2 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|452211585|ref|YP_007491699.1| - 0.0086 15.9 0.0 0.012 15.4 0.0 1.2 1 0 0 1 1 1 1 Peptidase C26 GATase_3 PF07685.14 gi|452211585|ref|YP_007491699.1| - 0.027 14.1 0.0 0.036 13.6 0.0 1.2 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain ThiJ_like PF17124.5 gi|452211585|ref|YP_007491699.1| - 0.049 13.3 0.0 0.11 12.2 0.0 1.5 1 1 0 1 1 1 0 ThiJ/PfpI family-like GATase_5 PF13507.6 gi|452211585|ref|YP_007491699.1| - 0.073 12.2 0.0 0.11 11.5 0.0 1.5 1 1 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain Cys_Met_Meta_PP PF01053.20 gi|452211586|ref|YP_007491700.1| - 1.6e-150 500.9 0.0 1.8e-150 500.8 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 gi|452211586|ref|YP_007491700.1| - 4.5e-08 32.7 0.1 6.5e-08 32.1 0.1 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Met_gamma_lyase PF06838.11 gi|452211586|ref|YP_007491700.1| - 9e-06 24.4 0.1 0.00011 20.8 0.1 2.0 1 1 0 1 1 1 1 Methionine gamma-lyase Aminotran_5 PF00266.19 gi|452211586|ref|YP_007491700.1| - 1.4e-05 24.2 0.0 2.2e-05 23.6 0.0 1.4 1 0 0 1 1 1 1 Aminotransferase class-V NAPRTase PF04095.16 gi|452211587|ref|YP_007491701.1| - 1.9e-49 168.4 0.2 2.1e-48 165.0 0.2 2.0 1 1 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) family NAPRTase_N PF17767.1 gi|452211587|ref|YP_007491701.1| - 1.3e-35 122.5 0.2 2e-35 121.9 0.2 1.3 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain PD40 PF07676.12 gi|452211590|ref|YP_007491704.1| - 4.9e-20 70.9 15.7 1.8e-12 46.9 0.9 4.8 5 0 0 5 5 5 3 WD40-like Beta Propeller Repeat DPPIV_N PF00930.21 gi|452211590|ref|YP_007491704.1| - 1.5e-05 23.9 1.9 0.0016 17.3 0.7 3.7 1 1 3 4 4 4 2 Dipeptidyl peptidase IV (DPP IV) N-terminal region DUF5050 PF16472.5 gi|452211590|ref|YP_007491704.1| - 0.00077 18.8 0.4 0.59 9.3 0.0 2.6 1 1 0 2 2 2 2 Domain of unknown function (DUF5050) Pectate_lyase22 PF14583.6 gi|452211590|ref|YP_007491704.1| - 0.03 13.0 0.3 4.5 5.8 0.0 3.1 3 1 1 4 4 4 0 Oligogalacturonate lyase Hexapep PF00132.24 gi|452211591|ref|YP_007491705.1| - 1.4e-11 43.6 1.1 0.011 15.4 0.0 4.6 3 1 1 4 4 4 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|452211591|ref|YP_007491705.1| - 2.4e-05 24.0 5.9 0.02 14.7 0.4 4.5 4 1 1 5 5 5 3 Hexapeptide repeat of succinyl-transferase Adhesin_P1_N PF18652.1 gi|452211591|ref|YP_007491705.1| - 0.0032 17.4 0.2 0.0073 16.3 0.2 1.6 1 0 0 1 1 1 1 Adhesin P1 N-terminal domain FtsX PF02687.21 gi|452211592|ref|YP_007491706.1| - 1.2 9.7 9.1 0.64 10.5 0.4 3.2 2 1 1 3 3 3 0 FtsX-like permease family HEAT_2 PF13646.6 gi|452211593|ref|YP_007491707.1| - 2.2e-102 335.7 27.1 1.7e-17 63.6 1.5 6.7 1 1 7 8 8 8 8 HEAT repeats HEAT PF02985.22 gi|452211593|ref|YP_007491707.1| - 7.8e-50 162.6 1.0 0.00041 20.4 0.0 12.9 13 0 0 13 13 13 9 HEAT repeat HEAT_PBS PF03130.16 gi|452211593|ref|YP_007491707.1| - 2.1e-45 148.8 23.3 0.0045 17.5 0.1 14.1 14 0 0 14 14 14 11 PBS lyase HEAT-like repeat HEAT_EZ PF13513.6 gi|452211593|ref|YP_007491707.1| - 3.4e-36 123.2 15.4 0.0012 19.3 0.0 12.4 11 2 2 13 13 13 8 HEAT-like repeat Arm PF00514.23 gi|452211593|ref|YP_007491707.1| - 1.5e-19 69.3 0.7 0.063 13.3 0.0 9.7 8 2 2 10 10 10 3 Armadillo/beta-catenin-like repeat Cnd1 PF12717.7 gi|452211593|ref|YP_007491707.1| - 4.4e-17 62.6 0.3 0.044 13.8 0.0 8.3 4 3 3 7 7 7 3 non-SMC mitotic condensation complex subunit 1 Adaptin_N PF01602.20 gi|452211593|ref|YP_007491707.1| - 8.9e-11 41.0 0.1 3.8e-06 25.7 0.0 5.7 1 1 2 3 3 3 1 Adaptin N terminal region ERAP1_C PF11838.8 gi|452211593|ref|YP_007491707.1| - 2.4e-06 27.4 0.0 0.033 13.8 0.0 3.5 1 1 3 4 4 4 2 ERAP1-like C-terminal domain Vac14_Fab1_bd PF12755.7 gi|452211593|ref|YP_007491707.1| - 5.2e-06 27.0 0.0 9.1 7.0 0.0 6.7 5 1 2 8 8 6 0 Vacuolar 14 Fab1-binding region RasGEF_N_2 PF14663.6 gi|452211593|ref|YP_007491707.1| - 5.9e-06 26.7 0.1 15 6.1 0.0 5.7 5 1 0 6 6 6 0 Rapamycin-insensitive companion of mTOR RasGEF_N domain RTP1_C1 PF10363.9 gi|452211593|ref|YP_007491707.1| - 2.6e-05 24.4 0.0 3.9 7.7 0.0 4.5 3 1 0 4 4 4 1 Required for nuclear transport of RNA pol II C-terminus 1 CLASP_N PF12348.8 gi|452211593|ref|YP_007491707.1| - 5.2e-05 22.9 0.2 9.6 5.7 0.0 5.4 5 1 1 6 6 6 0 CLASP N terminal Aconitase_B_N PF11791.8 gi|452211593|ref|YP_007491707.1| - 0.00024 21.2 5.4 3.6 7.6 0.1 6.2 2 2 4 7 7 7 1 Aconitate B N-terminal domain IFRD PF05004.13 gi|452211593|ref|YP_007491707.1| - 0.0023 17.1 1.4 4.1 6.4 0.1 4.5 4 1 2 6 6 6 1 Interferon-related developmental regulator (IFRD) RICTOR_M PF14666.6 gi|452211593|ref|YP_007491707.1| - 0.0032 17.2 0.0 1.2e+02 2.5 0.0 5.1 5 0 0 5 5 5 0 Rapamycin-insensitive companion of mTOR, middle domain DUF1641 PF07849.11 gi|452211593|ref|YP_007491707.1| - 0.004 17.0 10.2 28 4.7 0.0 7.1 7 1 0 7 7 6 0 Protein of unknown function (DUF1641) Vitellogenin_N PF01347.22 gi|452211593|ref|YP_007491707.1| - 0.0052 15.3 0.0 3.8 5.8 0.0 4.1 2 1 3 5 5 5 1 Lipoprotein amino terminal region ALF PF03752.13 gi|452211593|ref|YP_007491707.1| - 0.013 15.4 7.0 4.3 7.4 0.1 6.4 7 0 0 7 7 7 0 Short repeats of unknown function CHAD PF05235.14 gi|452211593|ref|YP_007491707.1| - 0.03 14.3 0.7 1 9.3 0.2 2.7 2 1 1 3 3 3 0 CHAD domain DUF5397 PF17375.2 gi|452211593|ref|YP_007491707.1| - 0.044 13.5 0.0 4.4 7.1 0.0 3.6 3 1 1 4 4 3 0 Family of unknown function (DUF5397) TAF6_C PF07571.13 gi|452211593|ref|YP_007491707.1| - 0.048 14.0 0.1 1.5 9.2 0.0 3.4 3 1 0 3 3 2 0 TAF6 C-terminal HEAT repeat domain Tti2 PF10521.9 gi|452211593|ref|YP_007491707.1| - 0.11 12.0 0.0 26 4.3 0.0 3.7 3 1 1 4 4 4 0 Tti2 family ISG65-75 PF11727.8 gi|452211593|ref|YP_007491707.1| - 0.13 11.5 0.2 0.89 8.7 0.0 2.3 2 0 0 2 2 2 0 Invariant surface glycoprotein HTH_8 PF02954.19 gi|452211593|ref|YP_007491707.1| - 0.15 11.9 0.7 3.2 7.6 0.2 3.4 3 0 0 3 3 3 0 Bacterial regulatory protein, Fis family Cohesin_HEAT PF12765.7 gi|452211593|ref|YP_007491707.1| - 0.15 12.4 7.6 35 4.8 0.1 5.2 5 0 0 5 5 5 0 HEAT repeat associated with sister chromatid cohesion Urease_alpha PF00449.20 gi|452211593|ref|YP_007491707.1| - 0.16 12.3 0.4 22 5.4 0.0 3.8 3 2 1 4 4 4 0 Urease alpha-subunit, N-terminal domain Proteasom_PSMB PF10508.9 gi|452211593|ref|YP_007491707.1| - 0.16 10.4 0.1 0.67 8.4 0.1 2.1 1 1 0 1 1 1 0 Proteasome non-ATPase 26S subunit Nop52 PF05997.12 gi|452211593|ref|YP_007491707.1| - 0.45 10.3 1.0 38 4.0 0.0 3.5 3 1 0 3 3 3 0 Nucleolar protein,Nop52 GCSF PF16647.5 gi|452211594|ref|YP_007491708.1| - 0.00054 19.8 0.0 0.00058 19.7 0.0 1.0 1 0 0 1 1 1 1 Granulocyte colony-stimulating factor ABC_tran_CTD PF16326.5 gi|452211595|ref|YP_007491709.1| - 0.0012 19.1 1.4 0.0012 19.1 1.4 2.7 3 0 0 3 3 3 1 ABC transporter C-terminal domain FlaC_arch PF05377.11 gi|452211595|ref|YP_007491709.1| - 0.0061 16.9 1.5 0.0061 16.9 1.5 3.1 3 0 0 3 3 3 1 Flagella accessory protein C (FlaC) DUF2275 PF10039.9 gi|452211595|ref|YP_007491709.1| - 0.019 15.1 0.1 0.032 14.4 0.1 1.3 1 0 0 1 1 1 0 Predicted integral membrane protein (DUF2275) Spc29 PF17082.5 gi|452211595|ref|YP_007491709.1| - 0.033 14.0 2.2 0.037 13.9 0.5 1.7 2 0 0 2 2 2 0 Spindle Pole Component 29 zf-AD PF07776.15 gi|452211595|ref|YP_007491709.1| - 0.044 14.0 0.3 0.51 10.6 0.0 2.6 2 1 0 2 2 2 0 Zinc-finger associated domain (zf-AD) DUF5082 PF16888.5 gi|452211595|ref|YP_007491709.1| - 0.1 12.9 9.8 5.4 7.3 0.3 3.8 2 1 2 4 4 4 0 Domain of unknown function (DUF5082) TBCC_N PF16752.5 gi|452211595|ref|YP_007491709.1| - 0.2 12.1 7.7 17 5.9 0.2 3.5 2 1 1 3 3 3 0 Tubulin-specific chaperone C N-terminal domain T4SS PF07996.11 gi|452211595|ref|YP_007491709.1| - 0.28 11.5 4.2 7.1 7.0 0.1 2.4 2 0 0 2 2 2 0 Type IV secretion system proteins Bacillus_HBL PF05791.11 gi|452211595|ref|YP_007491709.1| - 0.55 10.0 6.0 0.098 12.5 0.9 2.2 2 1 0 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) Fib_alpha PF08702.10 gi|452211595|ref|YP_007491709.1| - 1.1 9.5 11.3 3.3 7.9 0.6 3.1 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family DUF4085 PF13315.6 gi|452211595|ref|YP_007491709.1| - 1.6 8.3 9.0 6 6.4 1.6 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF4085) SPACA9 PF15120.6 gi|452211595|ref|YP_007491709.1| - 1.9 8.3 5.5 1.5 8.6 1.1 2.6 2 1 0 2 2 2 0 Sperm acrosome-associated protein 9 DUF948 PF06103.11 gi|452211595|ref|YP_007491709.1| - 2.2 8.6 11.3 30 5.0 0.3 3.6 4 0 0 4 4 4 0 Bacterial protein of unknown function (DUF948) Prominin PF05478.11 gi|452211595|ref|YP_007491709.1| - 4.8 5.0 10.9 0.69 7.8 0.4 2.7 2 1 1 3 3 3 0 Prominin CAMP_factor PF07373.11 gi|452211595|ref|YP_007491709.1| - 5.6 6.5 7.8 2.4 7.7 0.1 2.9 2 1 1 3 3 3 0 CAMP factor (Cfa) NPV_P10 PF05531.12 gi|452211595|ref|YP_007491709.1| - 7.3 7.1 12.4 6.5 7.3 0.4 3.5 3 1 0 3 3 3 0 Nucleopolyhedrovirus P10 protein DNA_repr_REX1B PF14966.6 gi|452211595|ref|YP_007491709.1| - 9.6 7.0 7.7 12 6.6 0.2 2.8 2 1 1 3 3 3 0 DNA repair REX1-B HTH_20 PF12840.7 gi|452211596|ref|YP_007491710.1| - 5.8e-12 45.5 0.1 8.4e-12 45.0 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain Methyltr_RsmF_N PF17125.5 gi|452211596|ref|YP_007491710.1| - 0.00058 20.3 0.0 0.00079 19.9 0.0 1.3 1 0 0 1 1 1 1 N-terminal domain of 16S rRNA methyltransferase RsmF TrmB PF01978.19 gi|452211596|ref|YP_007491710.1| - 0.00099 18.9 0.2 0.0026 17.6 0.2 1.7 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.20 gi|452211596|ref|YP_007491710.1| - 0.0016 18.3 0.4 0.0016 18.3 0.4 2.4 3 0 0 3 3 3 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 gi|452211596|ref|YP_007491710.1| - 0.0022 17.5 1.4 0.0046 16.5 1.4 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_23 PF13384.6 gi|452211596|ref|YP_007491710.1| - 0.0049 16.6 0.1 0.077 12.8 0.0 2.4 2 0 0 2 2 2 1 Homeodomain-like domain Dimerisation2 PF16864.5 gi|452211596|ref|YP_007491710.1| - 0.012 15.6 0.0 0.018 15.0 0.0 1.3 1 0 0 1 1 1 0 Dimerisation domain MarR_2 PF12802.7 gi|452211596|ref|YP_007491710.1| - 0.018 14.9 0.1 0.028 14.3 0.1 1.3 1 0 0 1 1 1 0 MarR family HTH_38 PF13936.6 gi|452211596|ref|YP_007491710.1| - 0.022 14.5 0.2 0.058 13.2 0.1 1.7 1 1 0 1 1 1 0 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|452211596|ref|YP_007491710.1| - 0.037 13.7 0.2 0.28 10.9 0.0 2.2 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_7 PF02796.15 gi|452211596|ref|YP_007491710.1| - 0.038 14.1 0.1 0.16 12.1 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase AIM24 PF01987.17 gi|452211597|ref|YP_007491711.1| - 0.024 14.4 0.0 0.037 13.8 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial biogenesis AIM24 CarboxypepD_reg PF13620.6 gi|452211598|ref|YP_007491712.1| - 0.00028 21.1 0.0 0.00057 20.1 0.0 1.5 1 0 0 1 1 1 1 Carboxypeptidase regulatory-like domain HTH_24 PF13412.6 gi|452211598|ref|YP_007491712.1| - 0.00071 19.1 0.5 0.0011 18.5 0.5 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|452211598|ref|YP_007491712.1| - 0.00082 19.3 0.1 0.0016 18.3 0.1 1.4 1 0 0 1 1 1 1 MarR family CarbopepD_reg_2 PF13715.6 gi|452211598|ref|YP_007491712.1| - 0.0036 17.3 0.0 0.0097 15.9 0.0 1.7 1 0 0 1 1 1 1 CarboxypepD_reg-like domain MarR_2 PF12802.7 gi|452211598|ref|YP_007491712.1| - 0.006 16.4 0.0 0.011 15.6 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|452211598|ref|YP_007491712.1| - 0.013 16.0 0.1 0.031 14.8 0.1 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 gi|452211598|ref|YP_007491712.1| - 0.036 14.1 0.4 0.062 13.3 0.4 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain ABC_tran PF00005.27 gi|452211600|ref|YP_007491714.1| - 1.2e-31 110.1 0.0 1.8e-31 109.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|452211600|ref|YP_007491714.1| - 4.2e-07 29.6 0.0 2e-06 27.4 0.0 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|452211600|ref|YP_007491714.1| - 1.5e-06 28.3 0.5 0.048 13.5 0.3 2.3 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|452211600|ref|YP_007491714.1| - 3.2e-06 27.6 0.0 5.3e-06 26.9 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|452211600|ref|YP_007491714.1| - 0.00085 19.0 0.0 0.0019 17.9 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|452211600|ref|YP_007491714.1| - 0.0013 18.7 0.0 0.0027 17.6 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_14 PF13173.6 gi|452211600|ref|YP_007491714.1| - 0.0023 18.0 0.0 0.0056 16.7 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|452211600|ref|YP_007491714.1| - 0.0079 16.7 0.5 0.093 13.3 0.5 2.4 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|452211600|ref|YP_007491714.1| - 0.009 16.3 0.1 0.03 14.6 0.0 1.8 2 0 0 2 2 2 1 AAA domain DUF2119 PF09892.9 gi|452211600|ref|YP_007491714.1| - 0.018 14.4 0.1 0.9 8.9 0.0 2.4 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2119) G-alpha PF00503.20 gi|452211600|ref|YP_007491714.1| - 0.027 13.6 0.1 0.053 12.7 0.0 1.5 2 0 0 2 2 2 0 G-protein alpha subunit IstB_IS21 PF01695.17 gi|452211600|ref|YP_007491714.1| - 0.032 14.0 0.0 0.41 10.4 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_23 PF13476.6 gi|452211600|ref|YP_007491714.1| - 0.043 14.3 0.2 0.15 12.6 0.0 2.0 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 gi|452211600|ref|YP_007491714.1| - 0.044 13.9 0.0 0.65 10.1 0.0 2.4 2 1 0 2 2 2 0 50S ribosome-binding GTPase AAA_24 PF13479.6 gi|452211600|ref|YP_007491714.1| - 0.052 13.3 0.0 0.12 12.1 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_13 PF13166.6 gi|452211600|ref|YP_007491714.1| - 0.054 12.1 0.0 1.3 7.5 0.0 2.1 1 1 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 gi|452211600|ref|YP_007491714.1| - 0.071 13.0 0.2 0.21 11.4 0.1 2.1 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea T2SSE PF00437.20 gi|452211600|ref|YP_007491714.1| - 0.072 12.1 0.0 0.12 11.4 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_10 PF12846.7 gi|452211600|ref|YP_007491714.1| - 0.074 12.0 0.0 0.13 11.2 0.0 1.4 1 0 0 1 1 1 0 AAA-like domain RNA_helicase PF00910.22 gi|452211600|ref|YP_007491714.1| - 0.088 13.2 0.0 0.24 11.8 0.0 1.7 1 0 0 1 1 1 0 RNA helicase AAA_33 PF13671.6 gi|452211600|ref|YP_007491714.1| - 0.16 12.1 0.0 0.22 11.7 0.0 1.5 1 1 0 1 1 1 0 AAA domain NPCBM_assoc PF10633.9 gi|452211601|ref|YP_007491715.1| - 8.3e-13 48.4 1.1 0.00011 22.3 0.0 4.3 4 0 0 4 4 4 3 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF11 PF01345.18 gi|452211601|ref|YP_007491715.1| - 3.6e-08 33.6 4.8 0.07 13.4 0.0 3.6 3 1 0 3 3 3 3 Domain of unknown function DUF11 CARDB PF07705.11 gi|452211601|ref|YP_007491715.1| - 2.6e-05 24.4 14.3 0.093 13.0 1.7 4.1 2 1 1 3 3 3 3 CARDB Guanylate_kin PF00625.21 gi|452211601|ref|YP_007491715.1| - 0.019 14.7 0.1 0.037 13.7 0.1 1.4 1 0 0 1 1 1 0 Guanylate kinase MG2 PF01835.19 gi|452211601|ref|YP_007491715.1| - 0.047 14.1 0.8 2.1 8.9 0.1 3.6 3 2 0 3 3 3 0 MG2 domain DUF4458 PF14660.6 gi|452211601|ref|YP_007491715.1| - 0.071 13.3 0.8 2.8 8.2 0.0 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4458) P2_N PF18628.1 gi|452211601|ref|YP_007491715.1| - 0.12 12.1 0.7 0.82 9.4 0.1 2.6 2 1 1 3 3 3 0 Viral coat protein P2 N-terminal domain OsmC PF02566.19 gi|452211601|ref|YP_007491715.1| - 0.17 12.4 0.0 0.69 10.4 0.0 2.1 2 0 0 2 2 2 0 OsmC-like protein DUF150_C PF17384.2 gi|452211601|ref|YP_007491715.1| - 0.26 11.4 1.2 0.92 9.7 0.4 2.3 2 0 0 2 2 2 0 RimP C-terminal SH3 domain fn3_6 PF17766.1 gi|452211601|ref|YP_007491715.1| - 1.2 9.3 6.0 1.3 9.3 0.2 3.5 2 2 0 3 3 3 0 Fibronectin type-III domain FixG_C PF11614.8 gi|452211601|ref|YP_007491715.1| - 1.6 8.9 4.9 21 5.4 0.1 4.0 3 2 2 5 5 5 0 IG-like fold at C-terminal of FixG, putative oxidoreductase NEAT PF05031.12 gi|452211601|ref|YP_007491715.1| - 3.1 8.4 13.6 33 5.1 10.5 3.7 2 2 0 2 2 2 0 Iron Transport-associated domain MacB_PCD PF12704.7 gi|452211602|ref|YP_007491716.1| - 4.4e-31 108.8 3.4 4.4e-31 108.8 3.4 2.7 2 1 0 4 4 4 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|452211602|ref|YP_007491716.1| - 8.5e-15 55.0 5.3 8.5e-15 55.0 5.3 3.2 3 0 0 3 3 3 1 FtsX-like permease family DUF2207 PF09972.9 gi|452211602|ref|YP_007491716.1| - 0.14 10.8 5.8 0.089 11.5 2.7 2.0 2 1 0 2 2 2 0 Predicted membrane protein (DUF2207) Yip1 PF04893.17 gi|452211602|ref|YP_007491716.1| - 0.29 10.8 15.8 0.74 9.5 11.8 2.2 2 0 0 2 2 2 0 Yip1 domain Transglut_core PF01841.19 gi|452211603|ref|YP_007491717.1| - 0.00028 21.3 0.0 0.0006 20.2 0.0 1.6 1 0 0 1 1 1 1 Transglutaminase-like superfamily CHASE4 PF05228.13 gi|452211604|ref|YP_007491718.1| - 1.8e-37 128.6 0.0 4.6e-37 127.3 0.0 1.7 2 0 0 2 2 2 1 CHASE4 domain HATPase_c PF02518.26 gi|452211604|ref|YP_007491718.1| - 6.7e-32 110.3 0.1 1.3e-31 109.4 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|452211604|ref|YP_007491718.1| - 8.2e-19 67.4 0.3 6.6e-18 64.5 0.1 2.3 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_4 PF08448.10 gi|452211604|ref|YP_007491718.1| - 4.6e-06 26.8 0.0 0.0035 17.6 0.0 2.4 2 0 0 2 2 2 2 PAS fold HATPase_c_5 PF14501.6 gi|452211604|ref|YP_007491718.1| - 2.3e-05 24.2 0.1 0.00011 22.0 0.0 2.2 2 0 0 2 2 2 1 GHKL domain HATPase_c_2 PF13581.6 gi|452211604|ref|YP_007491718.1| - 0.0044 17.0 0.0 0.0082 16.1 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.6 gi|452211604|ref|YP_007491718.1| - 0.03 14.1 0.1 0.058 13.2 0.1 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HAMP PF00672.25 gi|452211604|ref|YP_007491718.1| - 0.054 13.9 0.0 0.11 12.8 0.0 1.5 1 0 0 1 1 1 0 HAMP domain CxxCxxCC PF03692.15 gi|452211605|ref|YP_007491719.1| - 3.5e-06 27.6 1.6 1.1e-05 26.0 0.7 2.2 2 1 1 3 3 3 1 Putative zinc- or iron-chelating domain Kri1_C PF12936.7 gi|452211605|ref|YP_007491719.1| - 0.072 13.3 0.1 0.29 11.3 0.0 1.9 2 0 0 2 2 2 0 KRI1-like family C-terminal CHASE4 PF05228.13 gi|452211606|ref|YP_007491720.1| - 4.5e-33 114.4 0.0 2.2e-31 108.9 0.0 2.3 2 0 0 2 2 2 1 CHASE4 domain HATPase_c PF02518.26 gi|452211606|ref|YP_007491720.1| - 1.6e-29 102.6 0.2 4.4e-29 101.2 0.2 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|452211606|ref|YP_007491720.1| - 2.6e-20 72.2 0.0 7.5e-20 70.7 0.0 1.9 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS_4 PF08448.10 gi|452211606|ref|YP_007491720.1| - 2.3e-14 53.5 0.0 4.7e-14 52.6 0.0 1.5 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.7 gi|452211606|ref|YP_007491720.1| - 9.7e-07 29.0 0.1 8.3e-06 26.0 0.0 2.5 2 1 0 2 2 2 1 PAS domain HATPase_c_5 PF14501.6 gi|452211606|ref|YP_007491720.1| - 8e-06 25.7 0.3 0.00012 21.9 0.0 2.9 2 1 1 3 3 3 1 GHKL domain PAS_10 PF13596.6 gi|452211606|ref|YP_007491720.1| - 0.005 17.4 0.0 0.022 15.3 0.0 2.2 1 1 0 1 1 1 1 PAS domain HAMP PF00672.25 gi|452211606|ref|YP_007491720.1| - 0.0064 16.8 0.1 0.014 15.8 0.1 1.6 1 0 0 1 1 1 1 HAMP domain HATPase_c_3 PF13589.6 gi|452211606|ref|YP_007491720.1| - 0.0074 16.1 0.0 0.019 14.8 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.6 gi|452211606|ref|YP_007491720.1| - 0.027 14.4 0.0 0.085 12.8 0.0 1.8 2 0 0 2 2 2 0 Histidine kinase-like ATPase domain DUF5481 PF17578.2 gi|452211606|ref|YP_007491720.1| - 0.045 14.2 0.4 0.12 12.8 0.4 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF5481) PAS_8 PF13188.7 gi|452211606|ref|YP_007491720.1| - 0.063 13.3 0.1 0.26 11.4 0.0 2.1 2 0 0 2 2 2 0 PAS domain PAS PF00989.25 gi|452211606|ref|YP_007491720.1| - 0.12 12.4 0.1 3.2 7.8 0.0 3.1 2 1 0 2 2 2 0 PAS fold Ly49 PF08391.10 gi|452211606|ref|YP_007491720.1| - 0.85 10.0 3.4 36 4.7 0.1 3.0 3 0 0 3 3 3 0 Ly49-like protein, N-terminal region DUF1638 PF07796.11 gi|452211607|ref|YP_007491721.1| - 1.5e-33 116.2 0.0 1.9e-33 115.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1638) COX7a PF02238.15 gi|452211609|ref|YP_007491723.1| - 0.024 15.0 0.5 0.037 14.4 0.5 1.3 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VII Putative_PNPOx PF01243.20 gi|452211610|ref|YP_007491724.1| - 1.3e-20 73.4 0.0 1.6e-20 73.1 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_ox_like PF16242.5 gi|452211610|ref|YP_007491724.1| - 0.0026 17.3 0.0 0.0032 17.0 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase like Pyridox_oxase_2 PF12766.7 gi|452211610|ref|YP_007491724.1| - 0.073 13.7 0.0 0.099 13.3 0.0 1.2 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase DUF447 PF04289.12 gi|452211610|ref|YP_007491724.1| - 0.17 11.7 0.0 0.27 11.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF447) dCMP_cyt_deam_1 PF00383.23 gi|452211611|ref|YP_007491725.1| - 1.2e-11 44.3 0.0 1.8e-11 43.8 0.0 1.2 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 gi|452211611|ref|YP_007491725.1| - 2.4e-07 30.6 0.0 3.2e-07 30.2 0.0 1.2 1 0 0 1 1 1 1 MafB19-like deaminase APOBEC2 PF18772.1 gi|452211611|ref|YP_007491725.1| - 0.025 14.6 0.0 0.041 13.9 0.0 1.3 1 0 0 1 1 1 0 APOBEC2 NAD2 PF18782.1 gi|452211611|ref|YP_007491725.1| - 0.046 13.8 0.0 0.074 13.2 0.0 1.3 1 0 0 1 1 1 0 Novel AID APOBEC clade 2 OTT_1508_deam PF14441.6 gi|452211611|ref|YP_007491725.1| - 0.067 13.2 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 OTT_1508-like deaminase NAD1 PF18778.1 gi|452211611|ref|YP_007491725.1| - 0.14 12.2 0.0 0.22 11.6 0.0 1.2 1 0 0 1 1 1 0 Novel AID APOBEC clade 1 APOBEC3 PF18771.1 gi|452211611|ref|YP_007491725.1| - 0.14 12.3 0.0 0.22 11.6 0.0 1.3 1 0 0 1 1 1 0 APOBEC3 Fasciclin PF02469.22 gi|452211612|ref|YP_007491726.1| - 2.8e-37 127.8 0.0 4e-37 127.3 0.0 1.2 1 0 0 1 1 1 1 Fasciclin domain DUF4969 PF16339.5 gi|452211612|ref|YP_007491726.1| - 0.2 12.0 1.4 0.61 10.5 1.4 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4969) Putative_PNPOx PF01243.20 gi|452211613|ref|YP_007491727.1| - 5.5e-18 64.9 0.0 6.9e-18 64.6 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_ox_like PF16242.5 gi|452211613|ref|YP_007491727.1| - 1.8e-08 34.1 0.0 2.2e-08 33.8 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase like Pyridox_ox_2 PF12900.7 gi|452211613|ref|YP_007491727.1| - 1.1e-07 32.0 0.0 1.4e-07 31.6 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyrid_oxidase_2 PF13883.6 gi|452211613|ref|YP_007491727.1| - 0.016 15.1 0.0 0.03 14.3 0.0 1.4 1 1 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase PAS_3 PF08447.12 gi|452211614|ref|YP_007491728.1| - 4.3e-18 65.4 0.3 7e-18 64.7 0.3 1.4 1 0 0 1 1 1 1 PAS fold GAF_2 PF13185.6 gi|452211614|ref|YP_007491728.1| - 2.3e-12 47.4 0.0 3.5e-12 46.8 0.0 1.2 1 0 0 1 1 1 1 GAF domain PAS_4 PF08448.10 gi|452211614|ref|YP_007491728.1| - 0.0021 18.3 0.0 0.0035 17.6 0.0 1.3 1 0 0 1 1 1 1 PAS fold GAF_3 PF13492.6 gi|452211614|ref|YP_007491728.1| - 0.0024 18.2 0.0 0.0035 17.7 0.0 1.3 1 0 0 1 1 1 1 GAF domain GAF PF01590.26 gi|452211614|ref|YP_007491728.1| - 0.044 14.4 0.0 0.066 13.8 0.0 1.3 1 0 0 1 1 1 0 GAF domain PAS_9 PF13426.7 gi|452211614|ref|YP_007491728.1| - 0.09 13.0 0.2 0.18 12.0 0.2 1.5 1 0 0 1 1 1 0 PAS domain Phosphorylase PF00343.20 gi|452211615|ref|YP_007491729.1| - 9.4e-28 96.9 0.0 7.8e-19 67.4 0.0 3.3 3 1 1 4 4 4 2 Carbohydrate phosphorylase TPR_1 PF00515.28 gi|452211617|ref|YP_007491731.1| - 8.5e-40 133.0 9.0 1.7e-07 30.7 0.4 6.9 7 0 0 7 7 7 5 Tetratricopeptide repeat TPR_2 PF07719.17 gi|452211617|ref|YP_007491731.1| - 1.3e-36 121.7 11.9 6.4e-07 29.0 0.0 7.0 7 0 0 7 7 7 5 Tetratricopeptide repeat TPR_11 PF13414.6 gi|452211617|ref|YP_007491731.1| - 7.2e-35 118.4 4.2 2.3e-08 33.6 0.0 6.0 2 2 4 6 6 6 5 TPR repeat TPR_8 PF13181.6 gi|452211617|ref|YP_007491731.1| - 2.1e-32 108.6 2.6 1.9e-07 30.7 0.0 6.4 6 0 0 6 6 6 5 Tetratricopeptide repeat TPR_16 PF13432.6 gi|452211617|ref|YP_007491731.1| - 1.1e-26 93.2 5.7 1.9e-10 41.2 1.8 4.6 3 2 0 4 4 4 3 Tetratricopeptide repeat TPR_17 PF13431.6 gi|452211617|ref|YP_007491731.1| - 1.2e-24 84.9 3.1 0.0011 19.2 0.0 6.8 7 0 0 7 7 7 5 Tetratricopeptide repeat TPR_14 PF13428.6 gi|452211617|ref|YP_007491731.1| - 6.2e-23 79.5 7.4 7.1e-06 26.4 0.0 6.3 1 1 5 6 6 6 4 Tetratricopeptide repeat TPR_12 PF13424.6 gi|452211617|ref|YP_007491731.1| - 3e-20 72.3 4.3 6.4e-06 26.4 0.1 5.3 3 2 1 4 4 4 4 Tetratricopeptide repeat TPR_19 PF14559.6 gi|452211617|ref|YP_007491731.1| - 1.3e-16 60.9 1.6 1.2e-06 28.9 0.1 3.5 2 1 1 3 3 3 3 Tetratricopeptide repeat TPR_9 PF13371.6 gi|452211617|ref|YP_007491731.1| - 1.7e-15 56.9 0.0 9.9e-05 22.4 0.0 4.2 2 1 3 5 5 5 4 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|452211617|ref|YP_007491731.1| - 7.2e-15 55.0 1.2 3.4e-06 27.2 0.2 2.6 2 0 0 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 gi|452211617|ref|YP_007491731.1| - 1.2e-11 44.4 3.4 0.011 16.3 0.0 5.4 6 0 0 6 6 5 3 Tetratricopeptide repeat TPR_7 PF13176.6 gi|452211617|ref|YP_007491731.1| - 3.5e-11 42.3 1.0 0.001 18.9 0.0 4.9 6 0 0 6 6 4 2 Tetratricopeptide repeat TPR_15 PF13429.6 gi|452211617|ref|YP_007491731.1| - 2.4e-07 30.3 1.5 0.081 12.1 0.0 3.9 2 2 2 4 4 4 2 Tetratricopeptide repeat TPR_10 PF13374.6 gi|452211617|ref|YP_007491731.1| - 1.3e-06 28.0 3.7 0.26 11.2 0.2 5.4 6 0 0 6 6 5 1 Tetratricopeptide repeat NARP1 PF12569.8 gi|452211617|ref|YP_007491731.1| - 1.5e-06 27.4 0.7 0.016 14.2 0.1 2.3 2 0 0 2 2 2 2 NMDA receptor-regulated protein 1 TPR_20 PF14561.6 gi|452211617|ref|YP_007491731.1| - 2.9e-06 27.5 2.3 0.098 13.0 0.0 3.3 2 1 1 3 3 3 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|452211617|ref|YP_007491731.1| - 1.8e-05 24.7 0.7 0.41 10.7 0.0 3.7 2 1 1 3 3 3 1 Fis1 C-terminal tetratricopeptide repeat BTAD PF03704.17 gi|452211617|ref|YP_007491731.1| - 6.4e-05 23.4 7.6 0.00077 19.9 0.6 3.0 3 1 0 3 3 2 1 Bacterial transcriptional activator domain ChAPs PF09295.10 gi|452211617|ref|YP_007491731.1| - 7.9e-05 21.8 0.1 0.23 10.4 0.0 2.1 1 1 1 2 2 2 2 ChAPs (Chs5p-Arf1p-binding proteins) SRP_TPR_like PF17004.5 gi|452211617|ref|YP_007491731.1| - 8e-05 22.6 0.7 0.017 15.1 0.0 3.3 1 1 2 3 3 3 1 Putative TPR-like repeat TOM20_plant PF06552.12 gi|452211617|ref|YP_007491731.1| - 0.00037 20.3 2.4 0.015 15.0 0.6 2.9 2 1 0 2 2 2 1 Plant specific mitochondrial import receptor subunit TOM20 DUF3856 PF12968.7 gi|452211617|ref|YP_007491731.1| - 0.00043 20.4 3.6 0.15 12.1 0.0 4.1 2 2 2 4 4 4 1 Domain of Unknown Function (DUF3856) ANAPC5 PF12862.7 gi|452211617|ref|YP_007491731.1| - 0.0014 18.7 0.8 1.9 8.6 0.0 3.3 3 1 0 3 3 3 1 Anaphase-promoting complex subunit 5 TPR_21 PF09976.9 gi|452211617|ref|YP_007491731.1| - 0.003 17.3 0.6 11 5.7 0.0 3.2 2 1 1 3 3 3 0 Tetratricopeptide repeat-like domain Alkyl_sulf_dimr PF14863.6 gi|452211617|ref|YP_007491731.1| - 0.0056 17.1 0.1 0.86 10.1 0.0 2.5 2 1 0 2 2 2 1 Alkyl sulfatase dimerisation PPR PF01535.20 gi|452211617|ref|YP_007491731.1| - 0.024 14.9 1.7 1.9 8.9 0.0 4.2 4 0 0 4 4 4 0 PPR repeat DUF4919 PF16266.5 gi|452211617|ref|YP_007491731.1| - 0.034 14.1 0.0 7.9 6.4 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4919) TPR_4 PF07721.14 gi|452211617|ref|YP_007491731.1| - 0.035 14.7 0.2 13 6.7 0.0 3.7 3 0 0 3 3 3 0 Tetratricopeptide repeat TruB_N PF01509.18 gi|452211617|ref|YP_007491731.1| - 0.039 14.3 0.0 0.16 12.4 0.0 1.8 2 0 0 2 2 2 0 TruB family pseudouridylate synthase (N terminal domain) DUF3808 PF10300.9 gi|452211617|ref|YP_007491731.1| - 0.056 12.2 0.4 1.6 7.4 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3808) FliD_C PF07195.12 gi|452211617|ref|YP_007491731.1| - 0.062 12.7 0.0 0.1 12.0 0.0 1.4 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 C-terminus DUF4810 PF16068.5 gi|452211617|ref|YP_007491731.1| - 0.15 12.6 0.2 7.7 7.1 0.0 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4810) FAT PF02259.23 gi|452211617|ref|YP_007491731.1| - 0.16 11.1 2.5 1.1 8.4 0.6 2.7 1 1 1 2 2 2 0 FAT domain I-set PF07679.16 gi|452211619|ref|YP_007491733.1| - 0.0066 16.5 1.9 6 7.0 0.0 4.4 4 2 0 4 4 4 2 Immunoglobulin I-set domain DUF11 PF01345.18 gi|452211619|ref|YP_007491733.1| - 0.062 13.6 9.4 0.73 10.2 0.8 3.4 2 1 1 3 3 3 0 Domain of unknown function DUF11 Lantibiotic_a PF14867.6 gi|452211619|ref|YP_007491733.1| - 0.12 12.1 3.4 3.9 7.3 0.2 2.4 2 0 0 2 2 2 0 Lantibiotic alpha SusE PF14292.6 gi|452211619|ref|YP_007491733.1| - 4.1 7.7 8.5 1.2 9.4 2.1 3.2 2 1 0 2 2 2 0 SusE outer membrane protein Peptidase_M3 PF01432.20 gi|452211621|ref|YP_007491735.1| - 2.1e-29 103.1 6.2 3.3e-29 102.5 6.2 1.3 1 0 0 1 1 1 1 Peptidase family M3 Peptidase_M3_N PF08439.10 gi|452211621|ref|YP_007491735.1| - 0.0073 16.6 0.4 0.046 14.0 0.1 2.7 2 0 0 2 2 2 1 Oligopeptidase F SCAN PF02023.17 gi|452211621|ref|YP_007491735.1| - 0.05 13.4 0.2 0.54 10.1 0.1 2.4 2 0 0 2 2 2 0 SCAN domain CdiA_C_tRNase PF18664.1 gi|452211621|ref|YP_007491735.1| - 0.18 12.0 1.4 1.5 9.1 0.1 3.1 5 0 0 5 5 5 0 CdiA C-terminal tRNase domain Fic PF02661.18 gi|452211623|ref|YP_007491737.1| - 5.1e-21 75.4 0.0 4.1e-20 72.5 0.0 2.3 2 0 0 2 2 2 1 Fic/DOC family HTH_DeoR PF08220.12 gi|452211623|ref|YP_007491737.1| - 5.8e-05 22.8 0.1 0.00016 21.4 0.0 1.8 2 0 0 2 2 1 1 DeoR-like helix-turn-helix domain Fic_N PF13784.6 gi|452211623|ref|YP_007491737.1| - 0.00025 21.0 0.9 0.00068 19.6 0.3 2.1 2 0 0 2 2 2 1 Fic/DOC family N-terminal DUF4172 PF13776.6 gi|452211623|ref|YP_007491737.1| - 0.00034 20.9 0.1 0.00088 19.6 0.1 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4172) HTH_11 PF08279.12 gi|452211623|ref|YP_007491737.1| - 0.0045 16.9 0.0 0.016 15.1 0.0 2.0 1 0 0 1 1 1 1 HTH domain HTH_IclR PF09339.10 gi|452211623|ref|YP_007491737.1| - 0.005 16.6 0.0 0.041 13.7 0.0 2.2 2 0 0 2 2 2 1 IclR helix-turn-helix domain TrmB PF01978.19 gi|452211623|ref|YP_007491737.1| - 0.018 14.9 0.7 0.071 13.0 0.2 2.3 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB LexA_DNA_bind PF01726.16 gi|452211623|ref|YP_007491737.1| - 0.02 14.7 0.3 0.079 12.7 0.0 2.1 2 0 0 2 2 2 0 LexA DNA binding domain Penicillinase_R PF03965.16 gi|452211623|ref|YP_007491737.1| - 0.065 13.6 0.7 0.25 11.7 0.1 2.4 2 1 0 2 2 2 0 Penicillinase repressor FaeA PF04703.12 gi|452211623|ref|YP_007491737.1| - 0.07 13.5 0.3 1.5 9.2 0.0 2.6 2 0 0 2 2 2 0 FaeA-like protein Glyco_hydro_57 PF03065.15 gi|452211623|ref|YP_007491737.1| - 0.071 12.3 3.8 1.5 8.0 0.5 2.3 2 0 0 2 2 2 0 Glycosyl hydrolase family 57 MarR_2 PF12802.7 gi|452211623|ref|YP_007491737.1| - 0.13 12.2 0.1 0.49 10.3 0.0 2.0 3 0 0 3 3 3 0 MarR family PuR_N PF09182.10 gi|452211623|ref|YP_007491737.1| - 0.13 12.2 0.0 0.53 10.2 0.0 2.1 1 0 0 1 1 1 0 Bacterial purine repressor, N-terminal Clathrin_H_link PF13838.6 gi|452211623|ref|YP_007491737.1| - 0.15 12.0 0.1 0.45 10.5 0.1 1.8 1 0 0 1 1 1 0 Clathrin-H-link TFIIE_beta PF02186.15 gi|452211623|ref|YP_007491737.1| - 0.98 9.8 4.2 2.5 8.5 0.0 3.3 4 0 0 4 4 4 0 TFIIE beta subunit core domain DSPc PF00782.20 gi|452211624|ref|YP_007491738.1| - 1e-06 28.6 0.0 1.4e-06 28.1 0.0 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 gi|452211624|ref|YP_007491738.1| - 0.00046 19.8 0.0 0.00057 19.5 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase Y_phosphatase3 PF13350.6 gi|452211624|ref|YP_007491738.1| - 0.0012 18.8 0.0 0.0016 18.5 0.0 1.1 1 0 0 1 1 1 1 Tyrosine phosphatase family MarR PF01047.22 gi|452211625|ref|YP_007491739.1| - 2.1e-10 40.4 0.0 4.6e-10 39.3 0.0 1.6 2 0 0 2 2 2 1 MarR family MarR_2 PF12802.7 gi|452211625|ref|YP_007491739.1| - 2.3e-09 37.0 0.0 4.5e-09 36.1 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|452211625|ref|YP_007491739.1| - 1e-08 35.5 0.1 2.1e-07 31.3 0.0 2.0 2 0 0 2 2 2 1 Winged helix DNA-binding domain Fe_dep_repress PF01325.19 gi|452211625|ref|YP_007491739.1| - 0.00025 21.2 0.0 0.00057 20.0 0.0 1.6 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_24 PF13412.6 gi|452211625|ref|YP_007491739.1| - 0.00069 19.1 0.0 0.0028 17.2 0.0 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|452211625|ref|YP_007491739.1| - 0.0024 17.7 0.0 0.0048 16.7 0.0 1.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB zf_PR_Knuckle PF18445.1 gi|452211625|ref|YP_007491739.1| - 0.035 13.9 0.0 6.2 6.7 0.0 2.5 2 0 0 2 2 2 0 PR zinc knuckle motif HTH_5 PF01022.20 gi|452211625|ref|YP_007491739.1| - 0.095 12.6 2.6 4.1 7.4 0.0 2.6 2 1 1 3 3 3 0 Bacterial regulatory protein, arsR family Lon_C PF05362.13 gi|452211626|ref|YP_007491740.1| - 6.4e-89 296.9 1.7 1.4e-88 295.8 1.7 1.6 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain AAA PF00004.29 gi|452211626|ref|YP_007491740.1| - 3.3e-21 76.1 0.0 1.9e-20 73.6 0.0 2.4 3 0 0 3 3 1 1 ATPase family associated with various cellular activities (AAA) LON_substr_bdg PF02190.16 gi|452211626|ref|YP_007491740.1| - 3e-13 50.1 0.2 6.2e-13 49.1 0.2 1.5 1 0 0 1 1 1 1 ATP-dependent protease La (LON) substrate-binding domain ChlI PF13541.6 gi|452211626|ref|YP_007491740.1| - 2.7e-09 36.9 0.6 1.1e-08 34.9 0.1 2.3 3 0 0 3 3 2 1 Subunit ChlI of Mg-chelatase AAA_5 PF07728.14 gi|452211626|ref|YP_007491740.1| - 3.9e-09 36.6 0.0 1e-07 32.1 0.0 2.5 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|452211626|ref|YP_007491740.1| - 3.4e-06 27.5 0.3 2.9e-05 24.5 0.2 2.6 2 1 0 2 2 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|452211626|ref|YP_007491740.1| - 4.5e-06 27.0 0.0 0.0002 21.7 0.0 2.6 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 gi|452211626|ref|YP_007491740.1| - 3.7e-05 23.5 0.2 0.00076 19.2 0.0 2.7 2 1 0 2 2 2 1 IstB-like ATP binding protein RuvB_N PF05496.12 gi|452211626|ref|YP_007491740.1| - 8.4e-05 22.4 0.3 0.00038 20.2 0.0 2.2 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_PrkA PF08298.11 gi|452211626|ref|YP_007491740.1| - 0.00033 19.7 0.0 0.00067 18.7 0.0 1.4 1 0 0 1 1 1 1 PrkA AAA domain Rad17 PF03215.15 gi|452211626|ref|YP_007491740.1| - 0.00033 20.6 0.0 0.00091 19.2 0.0 1.7 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_18 PF13238.6 gi|452211626|ref|YP_007491740.1| - 0.00035 21.1 1.9 0.025 15.1 0.1 3.5 4 1 0 4 4 3 1 AAA domain AAA_2 PF07724.14 gi|452211626|ref|YP_007491740.1| - 0.00041 20.5 0.0 0.0016 18.6 0.0 2.1 2 1 0 2 2 1 1 AAA domain (Cdc48 subfamily) DUF815 PF05673.13 gi|452211626|ref|YP_007491740.1| - 0.0058 15.8 0.0 0.02 14.0 0.0 1.9 1 0 0 1 1 1 1 Protein of unknown function (DUF815) Birna_VP4 PF01768.16 gi|452211626|ref|YP_007491740.1| - 0.0065 16.3 0.1 0.016 15.1 0.1 1.6 1 0 0 1 1 1 1 Birnavirus VP4 protein AAA_3 PF07726.11 gi|452211626|ref|YP_007491740.1| - 0.0077 16.1 0.0 0.043 13.7 0.0 2.3 2 1 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 gi|452211626|ref|YP_007491740.1| - 0.0096 15.7 0.4 0.058 13.1 0.1 2.1 2 0 0 2 2 2 1 AAA domain Viral_helicase1 PF01443.18 gi|452211626|ref|YP_007491740.1| - 0.01 15.6 0.0 0.018 14.8 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase TsaE PF02367.17 gi|452211626|ref|YP_007491740.1| - 0.013 15.5 0.6 0.024 14.6 0.1 1.7 2 0 0 2 2 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE NACHT PF05729.12 gi|452211626|ref|YP_007491740.1| - 0.015 15.3 0.0 0.2 11.6 0.0 2.3 2 0 0 2 2 2 0 NACHT domain TIP49 PF06068.13 gi|452211626|ref|YP_007491740.1| - 0.015 14.5 0.1 0.015 14.5 0.1 2.2 2 0 0 2 2 2 0 TIP49 P-loop domain ATPase_2 PF01637.18 gi|452211626|ref|YP_007491740.1| - 0.023 14.6 1.3 2.9 7.7 0.0 3.3 3 0 0 3 3 3 0 ATPase domain predominantly from Archaea AAA_14 PF13173.6 gi|452211626|ref|YP_007491740.1| - 0.029 14.4 0.0 0.074 13.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.6 gi|452211626|ref|YP_007491740.1| - 0.029 14.7 0.1 0.12 12.7 0.0 2.1 2 0 0 2 2 2 0 AAA domain UPF0564 PF10595.9 gi|452211626|ref|YP_007491740.1| - 0.042 12.9 2.7 1.3 8.0 0.3 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0564 DUF4899 PF16240.5 gi|452211626|ref|YP_007491740.1| - 0.043 13.0 2.8 0.85 8.8 1.2 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4899) RNA_helicase PF00910.22 gi|452211626|ref|YP_007491740.1| - 0.049 14.0 0.0 0.18 12.2 0.0 2.0 2 0 0 2 2 1 0 RNA helicase NTPase_1 PF03266.15 gi|452211626|ref|YP_007491740.1| - 0.054 13.4 5.1 0.082 12.8 0.1 3.5 3 1 1 4 4 4 0 NTPase NB-ARC PF00931.22 gi|452211626|ref|YP_007491740.1| - 0.069 12.3 1.7 0.11 11.7 0.1 2.0 2 0 0 2 2 2 0 NB-ARC domain AAA_28 PF13521.6 gi|452211626|ref|YP_007491740.1| - 0.071 13.3 0.4 0.19 12.0 0.0 2.0 2 0 0 2 2 1 0 AAA domain AAA_33 PF13671.6 gi|452211626|ref|YP_007491740.1| - 0.075 13.2 0.0 0.24 11.6 0.0 1.9 1 0 0 1 1 1 0 AAA domain AAA_11 PF13086.6 gi|452211626|ref|YP_007491740.1| - 0.076 12.8 2.5 0.17 11.6 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_7 PF12775.7 gi|452211626|ref|YP_007491740.1| - 0.12 11.9 0.0 0.36 10.3 0.0 1.9 1 0 0 1 1 1 0 P-loop containing dynein motor region Cytidylate_kin PF02224.18 gi|452211626|ref|YP_007491740.1| - 0.13 12.0 1.6 0.4 10.4 0.1 2.3 2 0 0 2 2 2 0 Cytidylate kinase Mg_chelatase PF01078.21 gi|452211626|ref|YP_007491740.1| - 0.14 11.6 0.4 0.43 9.9 0.1 1.9 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI ABC_tran PF00005.27 gi|452211626|ref|YP_007491740.1| - 0.18 12.3 1.2 0.79 10.2 0.1 2.4 2 0 0 2 2 2 0 ABC transporter AAA_23 PF13476.6 gi|452211626|ref|YP_007491740.1| - 1.3 9.5 0.0 1.3 9.5 0.0 2.8 1 1 1 2 2 1 0 AAA domain FMN_red PF03358.15 gi|452211627|ref|YP_007491741.1| - 2.4e-23 82.6 0.0 3.3e-23 82.2 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|452211627|ref|YP_007491741.1| - 7.1e-13 48.7 0.0 8.7e-13 48.4 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.7 gi|452211627|ref|YP_007491741.1| - 0.002 18.4 0.0 0.0035 17.6 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain PIN PF01850.21 gi|452211628|ref|YP_007491742.1| - 7.1e-13 49.1 0.2 8.1e-13 49.0 0.2 1.0 1 0 0 1 1 1 1 PIN domain PH_8 PF15409.6 gi|452211628|ref|YP_007491742.1| - 0.14 12.4 0.2 1.1 9.6 0.0 2.0 1 1 1 2 2 2 0 Pleckstrin homology domain MFS_1 PF07690.16 gi|452211629|ref|YP_007491743.1| - 4e-46 157.5 44.4 4e-46 157.5 44.4 1.7 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|452211629|ref|YP_007491743.1| - 1.5e-10 40.5 6.0 1.5e-10 40.5 6.0 2.6 3 0 0 3 3 3 1 Sugar (and other) transporter MFS_3 PF05977.13 gi|452211629|ref|YP_007491743.1| - 1.6e-05 23.6 13.6 2.4e-05 22.9 13.6 1.4 1 1 0 1 1 1 1 Transmembrane secretion effector MFS_2 PF13347.6 gi|452211629|ref|YP_007491743.1| - 0.00098 17.8 3.4 0.00098 17.8 3.4 2.9 1 1 1 2 2 2 2 MFS/sugar transport protein DUF5527 PF17665.1 gi|452211629|ref|YP_007491743.1| - 0.37 10.3 5.1 0.25 10.8 0.3 2.6 3 0 0 3 3 3 0 Family of unknown function (DUF5527) Abhydrolase_1 PF00561.20 gi|452211631|ref|YP_007491745.1| - 4.3e-12 46.2 0.0 1.4e-11 44.5 0.0 1.7 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|452211631|ref|YP_007491745.1| - 4.3e-05 22.9 0.0 0.00018 20.8 0.0 1.9 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 gi|452211631|ref|YP_007491745.1| - 0.0012 19.5 0.0 0.0017 19.0 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family FSH1 PF03959.13 gi|452211631|ref|YP_007491745.1| - 0.014 15.1 0.0 0.027 14.1 0.0 1.5 1 0 0 1 1 1 0 Serine hydrolase (FSH1) GHMP_kinases_C PF08544.13 gi|452211631|ref|YP_007491745.1| - 0.015 15.6 0.0 0.032 14.6 0.0 1.6 1 0 0 1 1 1 0 GHMP kinases C terminal DUF4316 PF14195.6 gi|452211631|ref|YP_007491745.1| - 0.021 14.5 0.0 0.039 13.7 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4316) DLH PF01738.18 gi|452211631|ref|YP_007491745.1| - 0.026 14.1 0.0 0.23 11.0 0.0 2.0 2 0 0 2 2 2 0 Dienelactone hydrolase family Sugar-bind PF04198.13 gi|452211631|ref|YP_007491745.1| - 0.038 13.1 0.0 0.05 12.7 0.0 1.1 1 0 0 1 1 1 0 Putative sugar-binding domain Thioesterase PF00975.20 gi|452211631|ref|YP_007491745.1| - 0.038 14.1 0.0 0.043 13.9 0.0 1.3 1 0 0 1 1 1 0 Thioesterase domain DUF726 PF05277.12 gi|452211631|ref|YP_007491745.1| - 0.14 11.0 0.0 0.23 10.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF726) Lipase_3 PF01764.25 gi|452211631|ref|YP_007491745.1| - 0.19 11.6 0.0 0.36 10.7 0.0 1.4 1 0 0 1 1 1 0 Lipase (class 3) LysE PF01810.18 gi|452211632|ref|YP_007491746.1| - 3.4e-33 114.8 13.7 4e-33 114.5 13.7 1.0 1 0 0 1 1 1 1 LysE type translocator TerC PF03741.16 gi|452211632|ref|YP_007491746.1| - 0.0038 16.9 8.3 0.04 13.6 8.3 2.2 1 1 0 1 1 1 1 Integral membrane protein TerC family DUF1418 PF07214.12 gi|452211632|ref|YP_007491746.1| - 0.038 13.9 0.4 0.066 13.1 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1418) DUF3262 PF11660.8 gi|452211632|ref|YP_007491746.1| - 0.041 14.3 3.5 5.2 7.5 0.1 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3262) Phage_holin_3_3 PF16083.5 gi|452211632|ref|YP_007491746.1| - 0.05 13.7 0.7 0.05 13.7 0.7 2.6 2 1 0 2 2 2 0 LydA holin phage, holin superfamily III 2TM PF13239.6 gi|452211632|ref|YP_007491746.1| - 0.26 11.6 2.8 0.67 10.3 0.6 2.2 2 0 0 2 2 2 0 2TM domain Cas_Cas1 PF01867.16 gi|452211633|ref|YP_007491747.1| - 0.0043 16.2 0.0 0.0047 16.1 0.0 1.0 1 0 0 1 1 1 1 CRISPR associated protein Cas1 PAP2 PF01569.21 gi|452211634|ref|YP_007491748.1| - 5.1e-16 58.7 8.1 5.1e-16 58.7 8.1 1.6 2 0 0 2 2 2 1 PAP2 superfamily PAP2_3 PF14378.6 gi|452211634|ref|YP_007491748.1| - 4.4e-05 23.2 11.3 0.00022 20.9 11.4 1.9 1 1 0 1 1 1 1 PAP2 superfamily PsaX PF08078.12 gi|452211634|ref|YP_007491748.1| - 0.093 12.7 7.5 0.77 9.8 2.5 3.1 3 0 0 3 3 3 0 PsaX family PAP2_C PF14360.6 gi|452211634|ref|YP_007491748.1| - 1.4 9.5 6.5 0.28 11.7 1.2 2.3 2 1 1 3 3 3 0 PAP2 superfamily C-terminal DUF3488 PF11992.8 gi|452211634|ref|YP_007491748.1| - 5 6.0 8.4 0.96 8.3 0.2 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF3488) DUF2795 PF11387.8 gi|452211635|ref|YP_007491749.1| - 1.1e-10 41.5 0.0 1.6e-10 41.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2795) MatE PF01554.18 gi|452211636|ref|YP_007491750.1| - 4.4e-57 192.2 33.9 1.9e-29 102.4 14.0 2.3 2 0 0 2 2 2 2 MatE Polysacc_synt_C PF14667.6 gi|452211636|ref|YP_007491750.1| - 7.9e-12 45.4 17.4 3.1e-08 33.8 11.0 4.0 3 2 0 3 3 3 2 Polysaccharide biosynthesis C-terminal domain DUF5083 PF16890.5 gi|452211636|ref|YP_007491750.1| - 0.045 13.5 0.7 0.1 12.3 0.7 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF5083) PfkB PF00294.24 gi|452211637|ref|YP_007491751.1| - 3.1e-46 158.0 0.0 3.8e-46 157.8 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 gi|452211637|ref|YP_007491751.1| - 0.045 13.1 0.0 0.086 12.2 0.0 1.4 1 0 0 1 1 1 0 Phosphomethylpyrimidine kinase YdjM PF04307.14 gi|452211638|ref|YP_007491752.1| - 1.7e-14 53.5 6.5 2.3e-14 53.0 6.5 1.2 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase Zn_dep_PLPC PF00882.18 gi|452211638|ref|YP_007491752.1| - 0.12 12.3 0.0 0.17 11.9 0.0 1.4 1 1 0 1 1 1 0 Zinc dependent phospholipase C FixQ PF05545.11 gi|452211638|ref|YP_007491752.1| - 0.36 10.8 0.0 0.36 10.8 0.0 2.8 3 0 0 3 3 3 0 Cbb3-type cytochrome oxidase component FixQ DUF347 PF03988.12 gi|452211638|ref|YP_007491752.1| - 0.38 11.0 7.9 6.1 7.1 0.1 3.1 3 0 0 3 3 3 0 Repeat of Unknown Function (DUF347) BatA PF07584.11 gi|452211638|ref|YP_007491752.1| - 0.95 9.9 0.1 0.95 9.9 0.1 2.7 3 0 0 3 3 3 0 Aerotolerance regulator N-terminal Peptidase_M48 PF01435.18 gi|452211642|ref|YP_007491756.1| - 3.5e-36 124.8 0.0 6.5e-36 124.0 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|452211642|ref|YP_007491756.1| - 1.5e-07 30.9 0.4 3e-06 26.7 0.0 2.2 2 0 0 2 2 2 1 BlaR1 peptidase M56 DUF1129 PF06570.11 gi|452211642|ref|YP_007491756.1| - 0.044 13.3 0.2 0.044 13.3 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1129) DUF4157 PF13699.6 gi|452211642|ref|YP_007491756.1| - 0.1 12.8 0.0 0.2 11.9 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4157) ABC_tran PF00005.27 gi|452211644|ref|YP_007491758.1| - 3.1e-35 121.7 0.0 7.8e-35 120.4 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|452211644|ref|YP_007491758.1| - 4.9e-11 43.0 0.6 1.3e-06 28.5 0.0 2.3 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|452211644|ref|YP_007491758.1| - 4.1e-06 26.8 0.2 0.028 14.1 0.1 2.3 1 1 1 2 2 2 2 AAA ATPase domain AAA_23 PF13476.6 gi|452211644|ref|YP_007491758.1| - 1.1e-05 26.0 1.1 2.3e-05 25.0 1.1 1.5 1 1 0 1 1 1 1 AAA domain Rad17 PF03215.15 gi|452211644|ref|YP_007491758.1| - 1.9e-05 24.7 0.0 3.3e-05 23.9 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_29 PF13555.6 gi|452211644|ref|YP_007491758.1| - 8e-05 22.3 0.1 0.00015 21.5 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 gi|452211644|ref|YP_007491758.1| - 0.0057 16.1 0.1 0.048 13.1 0.1 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|452211644|ref|YP_007491758.1| - 0.019 14.8 0.3 0.047 13.6 0.1 1.7 2 0 0 2 2 2 0 RsgA GTPase AAA_30 PF13604.6 gi|452211644|ref|YP_007491758.1| - 0.025 14.3 0.0 0.38 10.5 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA PF00004.29 gi|452211644|ref|YP_007491758.1| - 0.029 14.8 0.3 0.21 12.0 0.3 2.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|452211644|ref|YP_007491758.1| - 0.063 13.6 0.2 0.16 12.2 0.2 1.9 1 1 0 1 1 1 0 AAA domain CBM_26 PF16824.5 gi|452211644|ref|YP_007491758.1| - 0.11 12.7 0.0 0.19 11.9 0.0 1.3 1 0 0 1 1 1 0 C-terminal carbohydrate-binding module SRP54 PF00448.22 gi|452211644|ref|YP_007491758.1| - 0.13 11.9 0.1 0.26 10.9 0.1 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain ABC2_membrane PF01061.24 gi|452211645|ref|YP_007491759.1| - 4.4e-44 150.4 21.9 4.4e-44 150.4 21.9 1.9 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|452211645|ref|YP_007491759.1| - 6.9e-18 64.9 31.1 6.9e-18 64.9 31.1 1.3 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|452211645|ref|YP_007491759.1| - 2.1e-09 37.1 18.7 3e-09 36.6 18.7 1.3 1 0 0 1 1 1 1 ABC-2 family transporter protein LysE PF01810.18 gi|452211646|ref|YP_007491760.1| - 1.6e-19 70.1 8.2 2.1e-19 69.8 8.2 1.1 1 0 0 1 1 1 1 LysE type translocator DUF423 PF04241.15 gi|452211646|ref|YP_007491760.1| - 1.1 9.5 6.3 0.69 10.2 0.2 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF423) CobA_CobO_BtuR PF02572.15 gi|452211648|ref|YP_007491762.1| - 8.5e-54 182.4 0.0 9.5e-54 182.2 0.0 1.0 1 0 0 1 1 1 1 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP IstB_IS21 PF01695.17 gi|452211648|ref|YP_007491762.1| - 0.022 14.5 0.3 1.9 8.2 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_24 PF13479.6 gi|452211648|ref|YP_007491762.1| - 0.022 14.5 0.0 0.096 12.4 0.0 1.8 1 1 1 2 2 2 0 AAA domain MscL PF01741.18 gi|452211650|ref|YP_007491764.1| - 1.4e-06 28.6 1.5 1.4e-06 28.6 1.5 1.0 1 0 0 1 1 1 1 Large-conductance mechanosensitive channel, MscL Flavodoxin_5 PF12724.7 gi|452211651|ref|YP_007491765.1| - 2.8e-21 76.3 0.1 3.2e-21 76.1 0.1 1.0 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_1 PF00258.25 gi|452211651|ref|YP_007491765.1| - 9.5e-07 29.1 0.0 9.5e-07 29.1 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin Flavodoxin_3 PF12641.7 gi|452211651|ref|YP_007491765.1| - 7.4e-06 25.7 0.0 9.8e-06 25.3 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin domain ERF PF04404.12 gi|452211651|ref|YP_007491765.1| - 0.083 12.7 0.0 0.1 12.4 0.0 1.1 1 0 0 1 1 1 0 ERF superfamily SH3_6 PF12913.7 gi|452211651|ref|YP_007491765.1| - 0.21 11.2 0.0 0.34 10.5 0.0 1.2 1 0 0 1 1 1 0 SH3 domain (SH3b1 type) ResIII PF04851.15 gi|452211652|ref|YP_007491766.1| - 3.5e-33 115.0 2.8 5.2e-33 114.5 0.1 2.5 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit SWI2_SNF2 PF18766.1 gi|452211652|ref|YP_007491766.1| - 3.1e-17 63.0 0.1 6.4e-17 62.0 0.1 1.4 1 0 0 1 1 1 1 SWI2/SNF2 ATPase HSDR_N PF04313.14 gi|452211652|ref|YP_007491766.1| - 2.9e-10 40.4 0.7 3e-08 33.9 0.0 3.5 3 1 0 3 3 3 1 Type I restriction enzyme R protein N terminus (HSDR_N) EcoEI_R_C PF08463.10 gi|452211652|ref|YP_007491766.1| - 4e-09 36.8 0.2 1.6e-07 31.6 0.0 2.9 3 0 0 3 3 3 1 EcoEI R protein C-terminal Helicase_C PF00271.31 gi|452211652|ref|YP_007491766.1| - 1.1e-05 25.8 0.0 4.9e-05 23.6 0.0 2.1 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.29 gi|452211652|ref|YP_007491766.1| - 5.7e-05 23.0 0.0 0.00013 21.8 0.0 1.7 1 1 0 1 1 1 1 DEAD/DEAH box helicase DUF2075 PF09848.9 gi|452211652|ref|YP_007491766.1| - 0.001 18.4 0.0 0.0025 17.1 0.0 1.6 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) HSDR_N_2 PF13588.6 gi|452211652|ref|YP_007491766.1| - 0.017 15.1 0.0 0.051 13.6 0.0 1.9 1 0 0 1 1 1 0 Type I restriction enzyme R protein N terminus (HSDR_N) PhoH PF02562.16 gi|452211652|ref|YP_007491766.1| - 0.018 14.5 0.1 0.31 10.5 0.0 2.3 2 0 0 2 2 2 0 PhoH-like protein Ribosomal_L38e PF01781.18 gi|452211652|ref|YP_007491766.1| - 0.018 15.1 0.2 0.077 13.1 0.2 2.1 1 0 0 1 1 1 0 Ribosomal L38e protein family AAA_19 PF13245.6 gi|452211652|ref|YP_007491766.1| - 0.049 14.0 0.0 0.13 12.6 0.0 1.7 1 0 0 1 1 1 0 AAA domain Bacillus_HBL PF05791.11 gi|452211652|ref|YP_007491766.1| - 0.095 12.5 0.0 0.24 11.2 0.0 1.7 1 0 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) DUF87 PF01935.17 gi|452211652|ref|YP_007491766.1| - 0.39 10.8 2.1 5.5 7.0 0.0 2.9 2 1 0 2 2 2 0 Helicase HerA, central domain DUF2674 PF10879.8 gi|452211653|ref|YP_007491767.1| - 0.19 11.3 0.0 1.1 8.9 0.0 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2674) TPR_12 PF13424.6 gi|452211654|ref|YP_007491768.1| - 1.3e-13 51.0 17.3 1.1e-05 25.6 0.0 7.0 3 2 5 8 8 8 4 Tetratricopeptide repeat TPR_8 PF13181.6 gi|452211654|ref|YP_007491768.1| - 9.6e-08 31.7 26.7 0.039 14.2 2.3 8.1 8 0 0 8 8 8 2 Tetratricopeptide repeat TPR_2 PF07719.17 gi|452211654|ref|YP_007491768.1| - 3.6e-07 29.8 21.8 0.73 10.1 1.9 7.6 8 0 0 8 8 8 3 Tetratricopeptide repeat TPR_10 PF13374.6 gi|452211654|ref|YP_007491768.1| - 6.3e-07 29.1 7.4 2.3 8.2 0.0 6.4 6 0 0 6 6 6 2 Tetratricopeptide repeat SNAP PF14938.6 gi|452211654|ref|YP_007491768.1| - 4.6e-05 23.0 5.4 0.29 10.5 0.0 3.7 1 1 1 3 3 3 2 Soluble NSF attachment protein, SNAP TPR_14 PF13428.6 gi|452211654|ref|YP_007491768.1| - 9e-05 23.0 4.8 15 6.8 0.0 6.7 6 2 1 7 7 7 0 Tetratricopeptide repeat TPR_1 PF00515.28 gi|452211654|ref|YP_007491768.1| - 0.00027 20.6 21.2 1.3 8.9 0.0 7.2 8 1 0 8 8 8 2 Tetratricopeptide repeat TPR_16 PF13432.6 gi|452211654|ref|YP_007491768.1| - 0.013 16.1 0.3 65 4.3 0.0 5.1 6 0 0 6 6 5 0 Tetratricopeptide repeat ArnB_C PF18677.1 gi|452211654|ref|YP_007491768.1| - 0.028 14.5 0.2 0.26 11.4 0.2 2.7 1 0 0 1 1 1 0 Archaellum regulatory network B, C-terminal domain CoiA PF06054.11 gi|452211654|ref|YP_007491768.1| - 0.069 12.3 0.8 0.18 10.9 0.2 1.8 1 1 1 2 2 2 0 Competence protein CoiA-like family ssDNA_DBD PF18333.1 gi|452211654|ref|YP_007491768.1| - 0.094 12.8 3.1 0.19 11.9 0.2 2.6 2 0 0 2 2 2 0 Non-canonical single-stranded DNA-binding domain TPR_21 PF09976.9 gi|452211654|ref|YP_007491768.1| - 0.12 12.1 4.9 0.82 9.3 0.1 3.0 3 0 0 3 3 3 0 Tetratricopeptide repeat-like domain TPR_17 PF13431.6 gi|452211654|ref|YP_007491768.1| - 0.17 12.4 10.6 19 5.9 0.0 5.6 7 0 0 7 7 5 0 Tetratricopeptide repeat BAR PF03114.18 gi|452211654|ref|YP_007491768.1| - 0.21 11.2 8.7 0.23 11.1 0.1 3.6 3 1 0 3 3 3 0 BAR domain ANAPC3 PF12895.7 gi|452211654|ref|YP_007491768.1| - 0.22 11.8 10.7 2.5 8.4 0.2 5.6 5 2 1 6 6 6 0 Anaphase-promoting complex, cyclosome, subunit 3 DUF4810 PF16068.5 gi|452211654|ref|YP_007491768.1| - 0.22 12.1 4.3 13 6.4 0.1 3.9 4 0 0 4 4 4 0 Domain of unknown function (DUF4810) DUF384 PF04064.13 gi|452211654|ref|YP_007491768.1| - 0.24 11.3 1.3 9.8 6.1 0.5 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF384) RPN7 PF10602.9 gi|452211654|ref|YP_007491768.1| - 0.33 10.6 17.6 0.22 11.2 0.3 4.9 3 2 2 5 5 5 0 26S proteasome subunit RPN7 Peptidase_M13_N PF05649.13 gi|452211654|ref|YP_007491768.1| - 0.51 10.0 6.3 0.3 10.7 3.2 2.1 2 1 0 2 2 2 0 Peptidase family M13 TPR_6 PF13174.6 gi|452211654|ref|YP_007491768.1| - 3.1 8.6 12.5 9.1 7.2 0.9 5.2 6 0 0 6 6 5 0 Tetratricopeptide repeat TPR_11 PF13414.6 gi|452211654|ref|YP_007491768.1| - 6.2 6.6 16.9 16 5.3 0.2 5.6 6 0 0 6 6 5 0 TPR repeat DUF2225 PF09986.9 gi|452211654|ref|YP_007491768.1| - 6.9 6.3 11.3 10 5.8 2.3 3.0 1 1 1 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2225) Helicase_C_2 PF13307.6 gi|452211655|ref|YP_007491769.1| - 3.1e-08 34.0 0.0 4e-08 33.6 0.0 1.3 1 0 0 1 1 1 1 Helicase C-terminal domain TPR_12 PF13424.6 gi|452211657|ref|YP_007491771.1| - 3.6e-38 129.7 25.1 2.5e-06 27.7 0.2 12.8 11 2 0 11 11 11 7 Tetratricopeptide repeat TPR_8 PF13181.6 gi|452211657|ref|YP_007491771.1| - 8.2e-27 91.1 61.7 3.9e-05 23.5 0.2 14.6 15 0 0 15 15 14 10 Tetratricopeptide repeat TPR_2 PF07719.17 gi|452211657|ref|YP_007491771.1| - 1.3e-25 87.4 56.4 0.00084 19.3 0.3 15.1 16 0 0 16 16 14 8 Tetratricopeptide repeat TPR_1 PF00515.28 gi|452211657|ref|YP_007491771.1| - 4.9e-23 79.9 53.9 4.9e-05 23.0 0.2 14.7 15 2 2 17 17 17 6 Tetratricopeptide repeat TPR_10 PF13374.6 gi|452211657|ref|YP_007491771.1| - 5e-19 67.5 16.2 4e-05 23.3 0.0 10.2 11 0 0 11 11 10 4 Tetratricopeptide repeat TPR_7 PF13176.6 gi|452211657|ref|YP_007491771.1| - 2.4e-18 64.7 24.2 0.0016 18.3 0.1 12.7 15 0 0 15 15 13 5 Tetratricopeptide repeat TPR_14 PF13428.6 gi|452211657|ref|YP_007491771.1| - 1.1e-16 60.1 10.3 1.4 9.9 0.0 14.1 12 3 2 14 14 14 1 Tetratricopeptide repeat TPR_6 PF13174.6 gi|452211657|ref|YP_007491771.1| - 4.7e-11 42.6 33.7 0.022 15.4 0.4 13.1 13 2 1 14 14 13 2 Tetratricopeptide repeat TPR_19 PF14559.6 gi|452211657|ref|YP_007491771.1| - 3.5e-10 40.3 19.0 1.1 9.8 0.1 11.9 10 4 3 13 13 12 2 Tetratricopeptide repeat TPR_16 PF13432.6 gi|452211657|ref|YP_007491771.1| - 1.4e-08 35.2 17.6 4.3 8.1 0.2 11.7 10 2 0 10 10 10 1 Tetratricopeptide repeat Sel1 PF08238.12 gi|452211657|ref|YP_007491771.1| - 5.3e-07 30.1 11.0 0.59 10.9 0.1 6.4 6 0 0 6 6 6 1 Sel1 repeat TPR_17 PF13431.6 gi|452211657|ref|YP_007491771.1| - 2.7e-06 27.4 25.4 2.2 8.9 0.0 12.3 13 2 2 15 15 11 1 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|452211657|ref|YP_007491771.1| - 5.7e-06 25.9 0.0 4 6.7 0.0 4.7 4 1 0 4 4 4 2 MalT-like TPR region TAtT PF16811.5 gi|452211657|ref|YP_007491771.1| - 7e-06 25.5 10.8 0.08 12.2 0.0 6.2 3 2 3 6 6 6 1 TRAP transporter T-component TOM20_plant PF06552.12 gi|452211657|ref|YP_007491771.1| - 9.9e-05 22.2 18.3 0.32 10.7 0.7 6.6 4 3 3 7 7 7 3 Plant specific mitochondrial import receptor subunit TOM20 TPR_21 PF09976.9 gi|452211657|ref|YP_007491771.1| - 0.0014 18.4 7.9 0.45 10.2 0.2 4.4 4 0 0 4 4 4 2 Tetratricopeptide repeat-like domain TPR_11 PF13414.6 gi|452211657|ref|YP_007491771.1| - 0.0029 17.3 50.5 0.12 12.1 0.9 12.1 12 2 0 12 12 11 2 TPR repeat YfdX PF10938.8 gi|452211657|ref|YP_007491771.1| - 0.014 15.3 5.0 28 4.6 0.0 4.8 5 0 0 5 5 5 0 YfdX protein TPR_9 PF13371.6 gi|452211657|ref|YP_007491771.1| - 0.015 15.5 1.0 85 3.4 0.0 5.9 6 1 1 7 7 5 0 Tetratricopeptide repeat TPR_5 PF12688.7 gi|452211657|ref|YP_007491771.1| - 0.028 14.7 0.0 30 4.9 0.0 3.9 4 0 0 4 4 3 0 Tetratrico peptide repeat DUF2225 PF09986.9 gi|452211657|ref|YP_007491771.1| - 0.063 13.0 26.6 1.2 8.8 0.2 6.5 4 2 2 6 6 6 0 Uncharacterized protein conserved in bacteria (DUF2225) SRP68 PF16969.5 gi|452211657|ref|YP_007491771.1| - 0.19 10.7 3.9 2.5 7.0 0.1 3.7 4 0 0 4 4 4 0 RNA-binding signal recognition particle 68 Mad3_BUB1_I PF08311.12 gi|452211657|ref|YP_007491771.1| - 0.25 11.3 12.0 0.083 12.9 0.8 4.8 4 2 1 5 5 4 0 Mad3/BUB1 homology region 1 HTH_Bact PF18768.1 gi|452211657|ref|YP_007491771.1| - 0.27 10.9 5.6 0.96 9.1 0.1 3.6 2 1 0 2 2 2 0 Helix-turn-helix bacterial domain MIT PF04212.18 gi|452211657|ref|YP_007491771.1| - 1.8 8.7 22.5 2.3 8.3 0.0 7.3 7 0 0 7 7 7 0 MIT (microtubule interacting and transport) domain RPN7 PF10602.9 gi|452211657|ref|YP_007491771.1| - 1.8 8.2 11.7 0.41 10.3 0.3 4.7 3 1 2 5 5 5 0 26S proteasome subunit RPN7 ANAPC3 PF12895.7 gi|452211657|ref|YP_007491771.1| - 5.1 7.4 11.9 12 6.2 0.7 5.8 4 2 2 6 6 5 0 Anaphase-promoting complex, cyclosome, subunit 3 N6_Mtase PF02384.16 gi|452211658|ref|YP_007491772.1| - 1.2e-66 225.1 0.0 2e-66 224.4 0.0 1.3 1 0 0 1 1 1 1 N-6 DNA Methylase HsdM_N PF12161.8 gi|452211658|ref|YP_007491772.1| - 7.5e-17 62.2 0.6 1.9e-16 60.9 0.1 2.0 2 1 0 2 2 2 1 HsdM N-terminal domain UPF0020 PF01170.18 gi|452211658|ref|YP_007491772.1| - 2.1e-08 34.1 0.0 3.3e-08 33.4 0.0 1.3 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_31 PF13847.6 gi|452211658|ref|YP_007491772.1| - 0.00031 20.6 0.0 0.14 12.0 0.0 2.4 2 0 0 2 2 2 2 Methyltransferase domain MTS PF05175.14 gi|452211658|ref|YP_007491772.1| - 0.053 13.1 0.0 0.11 12.0 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase small domain Eco57I PF07669.11 gi|452211658|ref|YP_007491772.1| - 0.13 12.8 0.0 0.31 11.6 0.0 1.6 1 0 0 1 1 1 0 Eco57I restriction-modification methylase Exo_endo_phos PF03372.23 gi|452211659|ref|YP_007491773.1| - 1.1e-23 84.0 0.0 1.3e-23 83.7 0.0 1.1 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 gi|452211659|ref|YP_007491773.1| - 5.2e-05 23.1 0.0 0.00054 19.8 0.0 2.3 2 1 0 2 2 2 1 Endonuclease-reverse transcriptase dCache_2 PF08269.11 gi|452211660|ref|YP_007491774.1| - 5.4e-12 45.5 0.0 7.7e-12 45.0 0.0 1.2 1 0 0 1 1 1 1 Cache domain Cupin_2 PF07883.11 gi|452211660|ref|YP_007491774.1| - 1.3e-11 44.0 0.1 6e-11 41.9 0.0 2.1 2 0 0 2 2 2 1 Cupin domain sCache_2 PF17200.4 gi|452211660|ref|YP_007491774.1| - 2.8e-11 43.5 0.0 4.3e-11 42.9 0.0 1.3 1 0 0 1 1 1 1 Single Cache domain 2 Cupin_1 PF00190.22 gi|452211660|ref|YP_007491774.1| - 5.5e-05 22.8 0.0 0.00019 21.0 0.0 1.8 1 1 0 1 1 1 1 Cupin MannoseP_isomer PF01050.18 gi|452211660|ref|YP_007491774.1| - 7.7e-05 22.6 0.0 0.0018 18.2 0.0 2.2 2 0 0 2 2 2 1 Mannose-6-phosphate isomerase AraC_binding PF02311.19 gi|452211660|ref|YP_007491774.1| - 0.0013 18.6 0.0 0.0047 16.8 0.0 1.8 2 0 0 2 2 2 1 AraC-like ligand binding domain EutQ PF06249.12 gi|452211660|ref|YP_007491774.1| - 0.014 15.2 0.0 0.023 14.5 0.0 1.3 1 0 0 1 1 1 0 Ethanolamine utilisation protein EutQ Cupin_3 PF05899.12 gi|452211660|ref|YP_007491774.1| - 0.039 13.6 0.0 0.087 12.5 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF861) Met_10 PF02475.16 gi|452211663|ref|YP_007491777.1| - 8.3e-66 221.5 0.0 1.3e-65 220.9 0.0 1.3 1 0 0 1 1 1 1 Met-10+ like-protein Trm5_N PF18093.1 gi|452211663|ref|YP_007491777.1| - 3.2e-09 36.5 0.7 2.5e-08 33.7 0.4 2.6 2 0 0 2 2 2 1 tRNA methyltransferase 5 N-terminal domain Methyltransf_15 PF09445.10 gi|452211663|ref|YP_007491777.1| - 4.4e-06 26.4 0.0 8.3e-06 25.5 0.0 1.5 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase MTS PF05175.14 gi|452211663|ref|YP_007491777.1| - 6.5e-06 25.8 0.0 1.3e-05 24.8 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_18 PF12847.7 gi|452211663|ref|YP_007491777.1| - 9.8e-05 22.3 0.0 0.00019 21.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain TRM PF02005.16 gi|452211663|ref|YP_007491777.1| - 0.00031 20.0 0.0 0.00038 19.8 0.0 1.1 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_25 PF13649.6 gi|452211663|ref|YP_007491777.1| - 0.00059 20.5 0.0 0.0012 19.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain GidB PF02527.15 gi|452211663|ref|YP_007491777.1| - 0.0027 17.1 0.0 0.0055 16.1 0.0 1.5 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G PrmA PF06325.13 gi|452211663|ref|YP_007491777.1| - 0.012 15.0 0.0 0.019 14.3 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Cons_hypoth95 PF03602.15 gi|452211663|ref|YP_007491777.1| - 0.08 12.6 0.0 0.19 11.4 0.0 1.5 1 1 0 1 1 1 0 Conserved hypothetical protein 95 tRNA_U5-meth_tr PF05958.11 gi|452211663|ref|YP_007491777.1| - 0.19 10.7 0.0 0.28 10.1 0.0 1.2 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase Bap31 PF05529.12 gi|452211664|ref|YP_007491778.1| - 0.076 12.9 0.2 0.13 12.1 0.2 1.3 1 0 0 1 1 1 0 Bap31/Bap29 transmembrane region UbiA PF01040.18 gi|452211667|ref|YP_007491781.1| - 0.016 14.5 0.1 0.022 14.0 0.1 1.1 1 0 0 1 1 1 0 UbiA prenyltransferase family Cpta_toxin PF07254.12 gi|452211667|ref|YP_007491781.1| - 0.069 13.1 1.1 0.11 12.5 1.1 1.3 1 0 0 1 1 1 0 Membrane-bound toxin component of toxin-antitoxin system DUF4410 PF14366.6 gi|452211667|ref|YP_007491781.1| - 0.16 11.8 0.0 0.25 11.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4410) CMD PF02627.20 gi|452211668|ref|YP_007491782.1| - 6.8e-11 42.1 0.0 7.8e-11 41.9 0.0 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family PPR PF01535.20 gi|452211668|ref|YP_007491782.1| - 0.086 13.1 0.1 3.3 8.2 0.0 2.4 2 0 0 2 2 2 0 PPR repeat MreB_Mbl PF06723.13 gi|452211668|ref|YP_007491782.1| - 0.096 11.5 0.0 0.1 11.4 0.0 1.0 1 0 0 1 1 1 0 MreB/Mbl protein Aldo_ket_red PF00248.21 gi|452211669|ref|YP_007491783.1| - 7.4e-41 140.2 0.1 3.7e-39 134.7 0.1 2.1 1 1 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.6 gi|452211669|ref|YP_007491783.1| - 1e-11 45.2 6.9 2.4e-11 44.0 6.9 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452211669|ref|YP_007491783.1| - 4.6e-10 39.5 6.1 1.1e-09 38.3 6.1 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|452211669|ref|YP_007491783.1| - 1.1e-07 32.1 1.8 0.00046 20.4 0.2 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|452211669|ref|YP_007491783.1| - 2.8e-07 30.9 5.2 6.3e-07 29.7 5.2 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|452211669|ref|YP_007491783.1| - 0.00011 22.2 10.8 0.00076 19.6 11.2 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|452211669|ref|YP_007491783.1| - 0.00041 20.1 12.5 0.00066 19.4 4.8 2.7 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_7 PF12838.7 gi|452211669|ref|YP_007491783.1| - 0.0009 19.8 10.9 0.0042 17.6 10.9 2.2 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|452211669|ref|YP_007491783.1| - 0.0077 16.3 3.3 0.0077 16.3 3.3 2.7 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_20 PF14691.6 gi|452211669|ref|YP_007491783.1| - 0.01 15.6 9.8 0.032 14.0 2.1 2.5 1 1 0 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_2 PF12797.7 gi|452211669|ref|YP_007491783.1| - 0.024 14.7 2.1 0.024 14.7 2.1 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_4 PF12800.7 gi|452211669|ref|YP_007491783.1| - 0.049 14.1 4.6 0.049 14.1 4.6 2.8 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_21 PF14697.6 gi|452211669|ref|YP_007491783.1| - 0.32 11.1 10.8 0.34 11.1 1.2 2.5 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452211669|ref|YP_007491783.1| - 7 7.7 16.7 0.17 12.9 3.9 2.6 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain Beta-lactamase PF00144.24 gi|452211670|ref|YP_007491784.1| - 1.7e-33 116.3 0.0 2.5e-33 115.7 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase 2C_adapt PF08793.10 gi|452211671|ref|YP_007491785.1| - 0.015 15.5 0.0 0.028 14.6 0.0 1.5 1 0 0 1 1 1 0 2-cysteine adaptor domain DUF1638 PF07796.11 gi|452211673|ref|YP_007491787.1| - 2e-32 112.5 0.1 2.6e-32 112.1 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1638) Closter_coat PF01785.17 gi|452211673|ref|YP_007491787.1| - 0.082 12.2 0.0 0.15 11.3 0.0 1.4 1 0 0 1 1 1 0 Closterovirus coat protein zf-CSL PF05207.13 gi|452211673|ref|YP_007491787.1| - 1.2 8.9 3.9 1.1 9.1 1.3 2.1 1 1 1 2 2 2 0 CSL zinc finger Whi5 PF08528.11 gi|452211674|ref|YP_007491788.1| - 0.0095 15.5 0.1 0.018 14.7 0.0 1.5 2 0 0 2 2 2 1 Whi5 like Gluconate_2-dh3 PF13618.6 gi|452211674|ref|YP_007491788.1| - 0.029 14.6 0.0 0.029 14.6 0.0 1.0 1 0 0 1 1 1 0 Gluconate 2-dehydrogenase subunit 3 EZH2_WD-Binding PF11616.8 gi|452211675|ref|YP_007491789.1| - 0.1 12.7 0.2 0.29 11.3 0.2 1.8 1 0 0 1 1 1 0 WD repeat binding protein EZH2 PKD PF00801.20 gi|452211677|ref|YP_007491791.1| - 1.4e-28 98.5 13.9 1.6e-11 43.8 0.4 4.0 4 0 0 4 4 4 3 PKD domain ChitinaseA_N PF08329.10 gi|452211677|ref|YP_007491791.1| - 8.7e-08 31.9 0.1 0.27 10.9 0.0 3.1 3 0 0 3 3 3 3 Chitinase A, N-terminal domain ETF_QO PF05187.13 gi|452211677|ref|YP_007491791.1| - 7.5e-06 26.0 0.0 3.4 7.8 0.0 3.4 3 0 0 3 3 3 3 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S SEP PF08059.13 gi|452211677|ref|YP_007491791.1| - 0.00038 21.0 0.0 0.4 11.3 0.0 4.0 4 1 0 4 4 4 1 SEP domain V-set_CD47 PF08204.11 gi|452211677|ref|YP_007491791.1| - 0.0026 17.8 0.0 10 6.1 0.0 3.3 3 0 0 3 3 3 1 CD47 immunoglobulin-like domain ANT PF03374.14 gi|452211677|ref|YP_007491791.1| - 0.096 13.0 1.5 9.9 6.5 0.1 3.1 3 0 0 3 3 3 0 Phage antirepressor protein KilAC domain Tad_C PF09977.9 gi|452211677|ref|YP_007491791.1| - 0.41 11.9 2.2 4.7 8.5 0.1 3.2 1 1 1 3 3 3 0 Putative Tad-like Flp pilus-assembly GyrI-like PF06445.15 gi|452211678|ref|YP_007491792.1| - 5.5e-25 88.5 0.1 7.6e-25 88.0 0.1 1.2 1 0 0 1 1 1 1 GyrI-like small molecule binding domain MerR_1 PF13411.6 gi|452211678|ref|YP_007491792.1| - 1.1e-09 38.2 0.0 2e-09 37.4 0.0 1.5 1 0 0 1 1 1 1 MerR HTH family regulatory protein Cass2 PF14526.6 gi|452211678|ref|YP_007491792.1| - 3.8e-07 30.4 0.0 6.9e-07 29.5 0.0 1.4 1 0 0 1 1 1 1 Integron-associated effector binding protein MerR PF00376.23 gi|452211678|ref|YP_007491792.1| - 1.5e-06 27.8 0.0 3e-06 26.9 0.0 1.5 1 0 0 1 1 1 1 MerR family regulatory protein MerR-DNA-bind PF09278.11 gi|452211678|ref|YP_007491792.1| - 0.016 15.7 0.1 0.03 14.8 0.1 1.5 1 0 0 1 1 1 0 MerR, DNA binding PKD PF00801.20 gi|452211680|ref|YP_007491794.1| - 2.7e-11 43.2 0.3 2.7e-11 43.2 0.3 3.1 3 0 0 3 3 3 1 PKD domain baeRF_family8 PF18851.1 gi|452211680|ref|YP_007491794.1| - 0.33 11.0 1.6 16 5.5 0.0 3.1 3 1 0 3 3 3 0 Bacterial archaeo-eukaryotic release factor family 8 DUF2523 PF10734.9 gi|452211680|ref|YP_007491794.1| - 1.7 9.3 4.1 63 4.2 0.2 3.8 1 1 3 4 4 4 0 Protein of unknown function (DUF2523) NAS PF03059.16 gi|452211681|ref|YP_007491795.1| - 1.4e-43 149.2 0.0 1.8e-43 148.9 0.0 1.1 1 0 0 1 1 1 1 Nicotianamine synthase protein Sybindin PF04099.12 gi|452211681|ref|YP_007491795.1| - 0.077 12.9 0.0 0.14 12.1 0.0 1.4 1 0 0 1 1 1 0 Sybindin-like family HTH_5 PF01022.20 gi|452211683|ref|YP_007491797.1| - 5e-14 51.9 0.3 8.4e-14 51.2 0.3 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|452211683|ref|YP_007491797.1| - 7.9e-13 48.3 0.5 1.3e-12 47.6 0.5 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|452211683|ref|YP_007491797.1| - 8.5e-07 28.8 0.2 1.3e-06 28.2 0.2 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB PadR PF03551.14 gi|452211683|ref|YP_007491797.1| - 3.1e-06 27.1 0.5 4.7e-05 23.3 0.5 2.1 1 1 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_24 PF13412.6 gi|452211683|ref|YP_007491797.1| - 3.2e-06 26.6 0.2 7.9e-06 25.3 0.0 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|452211683|ref|YP_007491797.1| - 3.8e-06 26.7 0.2 4.9e-06 26.3 0.2 1.2 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|452211683|ref|YP_007491797.1| - 1.2e-05 25.1 0.0 2e-05 24.4 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.12 gi|452211683|ref|YP_007491797.1| - 3.1e-05 23.8 0.2 6.2e-05 22.9 0.2 1.5 1 0 0 1 1 1 1 HTH domain HTH_26 PF13443.6 gi|452211683|ref|YP_007491797.1| - 0.00099 19.5 0.1 0.18 12.3 0.0 2.3 1 1 1 2 2 2 1 Cro/C1-type HTH DNA-binding domain Rrf2 PF02082.20 gi|452211683|ref|YP_007491797.1| - 0.0023 18.2 0.1 0.0037 17.6 0.1 1.4 1 0 0 1 1 1 1 Transcriptional regulator HTH_34 PF13601.6 gi|452211683|ref|YP_007491797.1| - 0.0058 16.8 0.2 0.0081 16.3 0.2 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 gi|452211683|ref|YP_007491797.1| - 0.0075 16.2 0.1 0.019 14.9 0.0 1.8 1 1 1 2 2 2 1 Crp-like helix-turn-helix domain HTH_29 PF13551.6 gi|452211683|ref|YP_007491797.1| - 0.041 13.9 0.0 0.072 13.1 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix LexA_DNA_bind PF01726.16 gi|452211683|ref|YP_007491797.1| - 0.044 13.6 0.0 0.08 12.7 0.0 1.4 1 0 0 1 1 1 0 LexA DNA binding domain HxlR PF01638.17 gi|452211683|ref|YP_007491797.1| - 0.064 13.1 0.2 0.083 12.7 0.2 1.3 1 0 0 1 1 1 0 HxlR-like helix-turn-helix HTH_41 PF14502.6 gi|452211683|ref|YP_007491797.1| - 0.072 12.8 0.0 0.14 11.9 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Fe_dep_repress PF01325.19 gi|452211683|ref|YP_007491797.1| - 0.074 13.3 0.1 0.17 12.1 0.1 1.6 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain GntR PF00392.21 gi|452211683|ref|YP_007491797.1| - 0.1 12.3 0.0 0.22 11.2 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family DUF4577 PF15145.6 gi|452211684|ref|YP_007491798.1| - 0.0057 16.7 0.1 0.0063 16.5 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4577) TssO PF17561.2 gi|452211684|ref|YP_007491798.1| - 0.0081 16.3 3.4 0.021 14.9 3.4 1.6 1 1 0 1 1 1 1 Type VI secretion system, TssO DUF2973 PF11189.8 gi|452211684|ref|YP_007491798.1| - 0.1 12.7 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2973) KxDL PF10241.9 gi|452211684|ref|YP_007491798.1| - 0.12 12.7 0.3 0.14 12.5 0.3 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein BatA PF07584.11 gi|452211686|ref|YP_007491800.1| - 0.096 13.1 0.4 0.33 11.3 0.0 2.1 3 0 0 3 3 3 0 Aerotolerance regulator N-terminal Phosphodiest PF01663.22 gi|452211687|ref|YP_007491801.1| - 2e-15 57.3 0.1 2.2e-14 53.8 0.1 2.0 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.23 gi|452211687|ref|YP_007491801.1| - 4.7e-11 42.6 0.0 2.8e-10 40.1 0.0 2.3 2 1 0 2 2 2 1 Sulfatase Metalloenzyme PF01676.18 gi|452211687|ref|YP_007491801.1| - 2.9e-09 36.7 0.1 1e-08 34.9 0.1 1.8 1 1 0 1 1 1 1 Metalloenzyme superfamily Tox-HDC PF15656.6 gi|452211687|ref|YP_007491801.1| - 0.071 13.3 0.0 0.13 12.5 0.0 1.3 1 0 0 1 1 1 0 Toxin with a H, D/N and C signature NAD_binding_1 PF00175.21 gi|452211687|ref|YP_007491801.1| - 0.087 13.5 0.0 0.17 12.5 0.0 1.5 1 0 0 1 1 1 0 Oxidoreductase NAD-binding domain NosD PF05048.13 gi|452211688|ref|YP_007491802.1| - 2.3e-31 108.9 20.2 2.3e-31 108.9 20.2 1.6 2 0 0 2 2 2 1 Periplasmic copper-binding protein (NosD) PKD PF00801.20 gi|452211688|ref|YP_007491802.1| - 7.4e-15 54.6 0.0 5.3e-06 26.2 0.0 2.4 2 0 0 2 2 2 2 PKD domain Beta_helix PF13229.6 gi|452211688|ref|YP_007491802.1| - 4.8e-09 36.3 17.5 4.8e-09 36.3 17.5 1.9 2 0 0 2 2 2 1 Right handed beta helix region Cupin_2 PF07883.11 gi|452211689|ref|YP_007491803.1| - 5.1e-15 54.9 0.1 2.2e-14 52.9 0.0 2.0 1 1 1 2 2 2 1 Cupin domain HTH_19 PF12844.7 gi|452211689|ref|YP_007491803.1| - 7.2e-10 38.8 0.1 1.3e-09 37.9 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.22 gi|452211689|ref|YP_007491803.1| - 8.2e-08 32.2 0.1 1.4e-07 31.4 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|452211689|ref|YP_007491803.1| - 3e-06 27.5 0.0 4.6e-06 26.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Cupin_3 PF05899.12 gi|452211689|ref|YP_007491803.1| - 0.003 17.2 0.0 0.0051 16.5 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF861) MannoseP_isomer PF01050.18 gi|452211689|ref|YP_007491803.1| - 0.0044 16.9 0.0 0.0081 16.1 0.0 1.5 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase AraC_binding PF02311.19 gi|452211689|ref|YP_007491803.1| - 0.0072 16.2 0.0 0.014 15.3 0.0 1.4 1 0 0 1 1 1 1 AraC-like ligand binding domain CENP-C_C PF11699.8 gi|452211689|ref|YP_007491803.1| - 0.011 16.0 0.1 0.022 15.0 0.0 1.6 1 1 0 1 1 1 0 Mif2/CENP-C like EutQ PF06249.12 gi|452211689|ref|YP_007491803.1| - 0.049 13.4 0.0 0.098 12.4 0.0 1.5 1 0 0 1 1 1 0 Ethanolamine utilisation protein EutQ CpxA_peri PF16527.5 gi|452211689|ref|YP_007491803.1| - 0.053 13.9 0.0 0.15 12.4 0.1 1.7 2 0 0 2 2 2 0 Two-component sensor protein CpxA, periplasmic domain AMP-binding PF00501.28 gi|452211690|ref|YP_007491804.1| - 1.4e-74 251.2 0.0 1.7e-74 250.9 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|452211690|ref|YP_007491804.1| - 1.9e-23 83.2 0.3 4.3e-23 82.1 0.3 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Fer4_7 PF12838.7 gi|452211691|ref|YP_007491805.1| - 1.2e-09 38.6 7.9 1.6e-09 38.2 7.9 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|452211691|ref|YP_007491805.1| - 5.6e-07 29.6 5.4 9.1e-07 28.9 5.4 1.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452211691|ref|YP_007491805.1| - 8e-07 29.1 19.6 5.4e-05 23.3 10.5 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452211691|ref|YP_007491805.1| - 1.5e-06 27.9 10.4 0.0025 17.8 2.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|452211691|ref|YP_007491805.1| - 3.3e-06 27.5 6.2 0.016 15.7 0.8 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|452211691|ref|YP_007491805.1| - 5.2e-06 26.6 7.9 0.0074 16.7 1.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|452211691|ref|YP_007491805.1| - 9.7e-06 25.6 8.9 2.9e-05 24.1 9.1 1.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|452211691|ref|YP_007491805.1| - 1.3e-05 24.8 13.1 0.00015 21.4 1.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|452211691|ref|YP_007491805.1| - 0.00016 21.6 11.3 0.011 15.7 2.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_22 PF17179.4 gi|452211691|ref|YP_007491805.1| - 0.00024 21.9 4.3 0.19 12.6 0.3 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|452211691|ref|YP_007491805.1| - 0.00031 21.2 6.1 0.053 14.1 1.2 2.2 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_16 PF13484.6 gi|452211691|ref|YP_007491805.1| - 0.0004 21.3 11.2 0.0039 18.1 0.9 2.2 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.6 gi|452211691|ref|YP_007491805.1| - 0.0067 16.8 11.6 0.23 11.9 12.0 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|452211691|ref|YP_007491805.1| - 0.046 14.7 15.8 0.17 12.9 4.1 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_15 PF13459.6 gi|452211691|ref|YP_007491805.1| - 0.44 11.3 8.1 3.4 8.5 0.7 2.2 1 1 1 2 2 2 0 4Fe-4S single cluster domain Fer4_18 PF13746.6 gi|452211691|ref|YP_007491805.1| - 1.9 8.7 6.7 5.5 7.2 1.2 2.1 1 1 2 3 3 3 0 4Fe-4S dicluster domain POR_N PF01855.19 gi|452211692|ref|YP_007491806.1| - 1e-51 175.9 0.0 1.3e-51 175.6 0.0 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PFOR_II PF17147.4 gi|452211692|ref|YP_007491806.1| - 2.2e-26 92.1 0.0 4e-26 91.3 0.0 1.4 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II TPP_enzyme_N PF02776.18 gi|452211692|ref|YP_007491806.1| - 8.7e-05 22.2 0.1 0.00015 21.5 0.1 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Transketolase_C PF02780.20 gi|452211692|ref|YP_007491806.1| - 0.0001 22.2 0.0 0.00017 21.4 0.0 1.3 1 0 0 1 1 1 1 Transketolase, C-terminal domain POR PF01558.18 gi|452211693|ref|YP_007491807.1| - 1.1e-35 123.3 0.2 2e-35 122.5 0.2 1.4 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase TPP_enzyme_C PF02775.21 gi|452211693|ref|YP_007491807.1| - 4.2e-24 85.1 0.1 6.7e-24 84.4 0.1 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AA_permease_2 PF13520.6 gi|452211694|ref|YP_007491808.1| - 8.2e-41 140.2 46.1 1.3e-40 139.6 46.1 1.3 1 1 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|452211694|ref|YP_007491808.1| - 8.2e-30 103.8 48.6 2.5e-29 102.2 48.6 1.6 1 1 0 1 1 1 1 Amino acid permease Lactamase_B PF00753.27 gi|452211695|ref|YP_007491809.1| - 1.1e-08 35.3 0.0 3e-08 33.9 0.0 1.7 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Flavodoxin_1 PF00258.25 gi|452211695|ref|YP_007491809.1| - 4.3e-05 23.7 0.0 0.00012 22.3 0.0 1.8 2 0 0 2 2 2 1 Flavodoxin Lactamase_B_2 PF12706.7 gi|452211695|ref|YP_007491809.1| - 0.0033 17.0 0.0 0.006 16.1 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Flavodoxin_5 PF12724.7 gi|452211695|ref|YP_007491809.1| - 0.0053 17.0 0.0 0.0089 16.3 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain Lactamase_B_3 PF13483.6 gi|452211695|ref|YP_007491809.1| - 0.014 15.3 0.0 0.035 14.0 0.0 1.6 2 0 0 2 2 2 0 Beta-lactamase superfamily domain UPF0261 PF06792.11 gi|452211695|ref|YP_007491809.1| - 0.036 13.0 0.0 0.061 12.3 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0261) Phage_Arf PF17585.2 gi|452211695|ref|YP_007491809.1| - 0.096 12.6 0.1 0.2 11.6 0.1 1.5 1 0 0 1 1 1 0 Accessory recombination function protein Gln-synt_C PF00120.24 gi|452211697|ref|YP_007491811.1| - 7.1e-51 173.2 0.0 7.3e-50 169.9 0.0 2.0 1 1 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 gi|452211697|ref|YP_007491811.1| - 4.4e-13 48.8 0.0 9.6e-13 47.7 0.0 1.6 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain Glycolipid_bind PF06475.11 gi|452211697|ref|YP_007491811.1| - 0.013 15.0 0.0 0.023 14.2 0.0 1.5 1 0 0 1 1 1 0 Putative glycolipid-binding Ion_trans PF00520.31 gi|452211698|ref|YP_007491812.1| - 8e-30 103.8 10.1 1e-29 103.5 10.1 1.1 1 0 0 1 1 1 1 Ion transport protein Ion_trans_2 PF07885.16 gi|452211698|ref|YP_007491812.1| - 1.2e-14 54.1 7.6 1.2e-14 54.1 7.6 2.3 2 0 0 2 2 2 1 Ion channel DZR PF12773.7 gi|452211698|ref|YP_007491812.1| - 0.0072 16.3 2.3 0.012 15.6 2.3 1.2 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|452211698|ref|YP_007491812.1| - 0.021 14.5 3.2 0.037 13.7 3.2 1.4 1 0 0 1 1 1 0 zinc-ribbon domain NRDD PF13597.6 gi|452211698|ref|YP_007491812.1| - 0.14 10.9 0.4 0.19 10.5 0.4 1.1 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase preSET_CXC PF18264.1 gi|452211698|ref|YP_007491812.1| - 0.25 11.8 1.5 0.39 11.2 1.5 1.2 1 0 0 1 1 1 0 CXC domain zf-CCHC_3 PF13917.6 gi|452211698|ref|YP_007491812.1| - 0.75 9.8 6.8 0.52 10.3 0.6 2.2 1 1 1 2 2 2 0 Zinc knuckle tRNA_deacylase PF04414.12 gi|452211699|ref|YP_007491813.1| - 1.6e-71 240.0 0.0 2e-71 239.8 0.0 1.1 1 0 0 1 1 1 1 D-aminoacyl-tRNA deacylase DUF3147 PF11345.8 gi|452211700|ref|YP_007491814.1| - 4.8e-39 133.2 5.7 5.4e-39 133.0 5.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3147) DUF3147 PF11345.8 gi|452211701|ref|YP_007491815.1| - 1.8e-23 83.0 10.0 2.1e-23 82.8 10.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3147) PrgI PF12666.7 gi|452211701|ref|YP_007491815.1| - 1.9 9.3 7.3 12 6.7 1.9 2.1 1 1 1 2 2 2 0 PrgI family protein Desulfoferrod_N PF06397.12 gi|452211703|ref|YP_007491817.1| - 0.075 12.7 2.5 0.075 12.7 2.5 2.5 1 1 1 2 2 2 0 Desulfoferrodoxin, N-terminal domain MatE PF01554.18 gi|452211705|ref|YP_007491819.1| - 7.4e-60 201.3 39.0 1.3e-34 119.2 13.6 2.3 2 0 0 2 2 2 2 MatE Polysacc_synt_C PF14667.6 gi|452211705|ref|YP_007491819.1| - 5e-10 39.6 41.0 1.6e-08 34.7 17.5 4.1 3 2 0 3 3 3 2 Polysaccharide biosynthesis C-terminal domain Polysacc_synt PF01943.17 gi|452211705|ref|YP_007491819.1| - 0.0071 15.8 33.1 0.33 10.3 0.9 3.4 1 1 1 3 3 3 3 Polysaccharide biosynthesis protein MarR PF01047.22 gi|452211706|ref|YP_007491820.1| - 5.5e-16 58.3 0.0 9e-15 54.4 0.0 2.1 2 0 0 2 2 2 1 MarR family MarR_2 PF12802.7 gi|452211706|ref|YP_007491820.1| - 1.8e-12 47.0 0.0 2.8e-12 46.3 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|452211706|ref|YP_007491820.1| - 4.3e-08 33.5 0.3 7.8e-08 32.7 0.1 1.5 2 0 0 2 2 1 1 Winged helix DNA-binding domain HTH_24 PF13412.6 gi|452211706|ref|YP_007491820.1| - 5.4e-08 32.3 0.1 2e-07 30.4 0.1 1.9 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding Fe_dep_repress PF01325.19 gi|452211706|ref|YP_007491820.1| - 5.1e-06 26.6 0.2 1.2e-05 25.4 0.1 1.7 2 0 0 2 2 1 1 Iron dependent repressor, N-terminal DNA binding domain TrmB PF01978.19 gi|452211706|ref|YP_007491820.1| - 5.7e-06 26.1 0.3 1.6e-05 24.7 0.3 1.7 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.17 gi|452211706|ref|YP_007491820.1| - 1.6e-05 24.7 0.7 2.1e-05 24.3 0.7 1.1 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_36 PF13730.6 gi|452211706|ref|YP_007491820.1| - 3.9e-05 23.5 0.3 8.7e-05 22.4 0.1 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_34 PF13601.6 gi|452211706|ref|YP_007491820.1| - 5.5e-05 23.3 0.3 8.2e-05 22.7 0.3 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_11 PF08279.12 gi|452211706|ref|YP_007491820.1| - 6.4e-05 22.8 0.1 0.00011 22.1 0.1 1.4 1 0 0 1 1 1 1 HTH domain B-block_TFIIIC PF04182.12 gi|452211706|ref|YP_007491820.1| - 0.0001 22.4 0.1 0.00022 21.3 0.1 1.6 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC HTH_54 PF18607.1 gi|452211706|ref|YP_007491820.1| - 0.0002 21.4 0.2 0.00037 20.5 0.2 1.4 1 0 0 1 1 1 1 ParA helix turn helix domain HTH_Crp_2 PF13545.6 gi|452211706|ref|YP_007491820.1| - 0.00033 20.6 0.1 0.00083 19.3 0.1 1.6 1 1 0 1 1 1 1 Crp-like helix-turn-helix domain ANT PF03374.14 gi|452211706|ref|YP_007491820.1| - 0.00035 20.8 0.1 0.00075 19.8 0.1 1.6 1 0 0 1 1 1 1 Phage antirepressor protein KilAC domain RPA_C PF08784.11 gi|452211706|ref|YP_007491820.1| - 0.00057 20.5 0.0 0.001 19.7 0.0 1.4 1 0 0 1 1 1 1 Replication protein A C terminal HxlR PF01638.17 gi|452211706|ref|YP_007491820.1| - 0.0024 17.7 0.0 0.0052 16.6 0.0 1.5 2 0 0 2 2 2 1 HxlR-like helix-turn-helix DUF3116 PF11313.8 gi|452211706|ref|YP_007491820.1| - 0.0027 17.5 0.2 0.0045 16.8 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3116) GntR PF00392.21 gi|452211706|ref|YP_007491820.1| - 0.0047 16.6 0.0 0.0077 15.9 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_IclR PF09339.10 gi|452211706|ref|YP_007491820.1| - 0.0093 15.8 0.0 0.014 15.2 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain DUF4065 PF13274.6 gi|452211706|ref|YP_007491820.1| - 0.016 16.1 0.5 0.026 15.4 0.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4065) FUR PF01475.19 gi|452211706|ref|YP_007491820.1| - 0.026 14.7 0.2 0.042 14.0 0.2 1.3 1 0 0 1 1 1 0 Ferric uptake regulator family Mga PF05043.13 gi|452211706|ref|YP_007491820.1| - 0.062 13.9 0.1 0.17 12.4 0.1 1.8 1 0 0 1 1 1 0 Mga helix-turn-helix domain HTH_23 PF13384.6 gi|452211706|ref|YP_007491820.1| - 0.071 12.9 0.0 0.18 11.7 0.0 1.7 1 0 0 1 1 1 0 Homeodomain-like domain DUF1495 PF07381.11 gi|452211706|ref|YP_007491820.1| - 0.088 12.6 0.1 0.15 11.9 0.1 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain (DUF1495) HTH_DeoR PF08220.12 gi|452211706|ref|YP_007491820.1| - 0.089 12.6 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain Rrf2 PF02082.20 gi|452211706|ref|YP_007491820.1| - 0.091 13.1 0.0 0.19 12.1 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator PadR PF03551.14 gi|452211706|ref|YP_007491820.1| - 0.11 12.5 1.0 0.15 12.1 0.3 1.6 2 0 0 2 2 1 0 Transcriptional regulator PadR-like family HTH_20 PF12840.7 gi|452211706|ref|YP_007491820.1| - 0.11 12.5 0.0 0.24 11.5 0.0 1.5 2 0 0 2 2 1 0 Helix-turn-helix domain HTH_29 PF13551.6 gi|452211706|ref|YP_007491820.1| - 0.13 12.3 0.0 0.23 11.5 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix DUF2157 PF09925.9 gi|452211707|ref|YP_007491821.1| - 5.5e-09 36.0 1.5 5.5e-09 36.0 1.5 1.7 1 1 0 1 1 1 1 Predicted membrane protein (DUF2157) PRD1_DD PF11087.8 gi|452211708|ref|YP_007491822.1| - 0.094 12.4 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 PRD1 phage membrane DNA delivery Peptidase_S9 PF00326.21 gi|452211710|ref|YP_007491824.1| - 2e-15 56.8 0.0 5.1e-09 35.9 0.0 2.2 1 1 1 2 2 2 2 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 gi|452211710|ref|YP_007491824.1| - 3.7e-13 49.3 0.0 7.3e-10 38.5 0.0 2.1 2 0 0 2 2 2 2 Serine aminopeptidase, S33 BAAT_C PF08840.11 gi|452211710|ref|YP_007491824.1| - 1.3e-11 44.8 0.0 1.1e-07 32.0 0.0 2.2 1 1 0 2 2 2 2 BAAT / Acyl-CoA thioester hydrolase C terminal Peptidase_S15 PF02129.18 gi|452211710|ref|YP_007491824.1| - 1.4e-11 44.5 0.0 2.3e-11 43.8 0.0 1.2 1 0 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) Abhydrolase_6 PF12697.7 gi|452211710|ref|YP_007491824.1| - 1.8e-10 41.8 0.0 2.3e-10 41.5 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family DLH PF01738.18 gi|452211710|ref|YP_007491824.1| - 7.3e-08 32.2 0.0 0.0059 16.2 0.0 2.4 2 0 0 2 2 2 2 Dienelactone hydrolase family Abhydrolase_1 PF00561.20 gi|452211710|ref|YP_007491824.1| - 2.7e-06 27.2 0.0 4.2e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_3 PF07859.13 gi|452211710|ref|YP_007491824.1| - 9.1e-05 22.4 0.0 0.00073 19.4 0.0 2.0 1 1 0 1 1 1 1 alpha/beta hydrolase fold AXE1 PF05448.12 gi|452211710|ref|YP_007491824.1| - 0.00041 19.1 0.0 0.17 10.6 0.0 2.2 1 1 1 2 2 2 2 Acetyl xylan esterase (AXE1) DUF1100 PF06500.11 gi|452211710|ref|YP_007491824.1| - 0.0019 17.1 0.0 0.0042 15.9 0.0 1.5 2 0 0 2 2 2 1 Alpha/beta hydrolase of unknown function (DUF1100) PGAP1 PF07819.13 gi|452211710|ref|YP_007491824.1| - 0.0082 15.9 0.0 0.014 15.1 0.0 1.4 1 0 0 1 1 1 1 PGAP1-like protein Acyl_transf_2 PF02273.15 gi|452211710|ref|YP_007491824.1| - 0.012 14.9 0.0 0.018 14.3 0.0 1.2 1 0 0 1 1 1 0 Acyl transferase FSH1 PF03959.13 gi|452211710|ref|YP_007491824.1| - 0.033 13.9 0.0 0.3 10.7 0.0 2.1 1 1 0 1 1 1 0 Serine hydrolase (FSH1) DUF2974 PF11187.8 gi|452211710|ref|YP_007491824.1| - 0.06 12.9 0.0 0.092 12.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) PCRF PF03462.18 gi|452211710|ref|YP_007491824.1| - 0.12 12.2 0.8 0.2 11.5 0.8 1.3 1 0 0 1 1 1 0 PCRF domain DUF3048_C PF17479.2 gi|452211710|ref|YP_007491824.1| - 0.12 12.7 0.1 0.41 11.0 0.0 1.8 1 1 0 2 2 2 0 Protein of unknown function (DUF3048) C-terminal domain EamA PF00892.20 gi|452211711|ref|YP_007491825.1| - 3.8e-20 72.5 38.6 3.6e-10 40.1 13.4 2.2 1 1 1 2 2 2 2 EamA-like transporter family Trp_oprn_chp PF09534.10 gi|452211711|ref|YP_007491825.1| - 6.3 6.6 6.2 4.9 6.9 1.2 2.7 2 1 0 2 2 2 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) GATase PF00117.28 gi|452211712|ref|YP_007491826.1| - 1.3e-23 83.7 0.0 2.6e-23 82.8 0.0 1.4 1 1 1 2 2 2 1 Glutamine amidotransferase class-I GATase_3 PF07685.14 gi|452211712|ref|YP_007491826.1| - 1.6e-06 27.9 0.0 1.9e-06 27.6 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain Peptidase_C26 PF07722.13 gi|452211712|ref|YP_007491826.1| - 7.2e-06 25.9 0.7 3.3e-05 23.7 0.7 1.9 1 1 0 1 1 1 1 Peptidase C26 HTS PF04204.16 gi|452211712|ref|YP_007491826.1| - 2.1e-05 23.6 0.0 3e-05 23.1 0.0 1.1 1 0 0 1 1 1 1 Homoserine O-succinyltransferase DJ-1_PfpI PF01965.24 gi|452211712|ref|YP_007491826.1| - 0.00034 20.4 0.0 0.00051 19.9 0.0 1.2 1 0 0 1 1 1 1 DJ-1/PfpI family DUF4373 PF14297.6 gi|452211712|ref|YP_007491826.1| - 0.14 13.0 0.0 0.24 12.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4373) DUF2156 PF09924.9 gi|452211713|ref|YP_007491827.1| - 7.7e-90 300.9 0.0 1.1e-89 300.4 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised conserved protein (DUF2156) LPG_synthase_TM PF03706.13 gi|452211713|ref|YP_007491827.1| - 1.9e-11 44.1 25.4 1.9e-11 44.1 25.4 3.1 2 1 1 3 3 3 1 Lysylphosphatidylglycerol synthase TM region Lectin_like PF18560.1 gi|452211714|ref|YP_007491828.1| - 1.5e-58 197.4 0.4 4.1e-58 196.0 0.4 1.8 1 0 0 1 1 1 1 Lectin like domain Peptidase_C1 PF00112.23 gi|452211714|ref|YP_007491828.1| - 4.7e-25 89.0 0.1 8e-25 88.2 0.1 1.3 1 0 0 1 1 1 1 Papain family cysteine protease PKD PF00801.20 gi|452211714|ref|YP_007491828.1| - 3.4e-18 65.3 2.4 3.2e-09 36.5 0.4 2.7 2 0 0 2 2 2 2 PKD domain Peptidase_C1_2 PF03051.15 gi|452211714|ref|YP_007491828.1| - 0.017 13.9 0.2 0.42 9.3 0.1 2.1 2 0 0 2 2 2 0 Peptidase C1-like family MatE PF01554.18 gi|452211715|ref|YP_007491829.1| - 4.3e-35 120.8 34.7 1e-18 67.5 12.2 2.4 2 0 0 2 2 2 2 MatE Polysacc_synt_C PF14667.6 gi|452211715|ref|YP_007491829.1| - 6.7e-12 45.7 23.6 3.5e-10 40.1 15.5 4.5 2 1 3 5 5 5 2 Polysaccharide biosynthesis C-terminal domain Response_reg PF00072.24 gi|452211717|ref|YP_007491831.1| - 3.9e-41 139.7 1.2 1.2e-19 70.5 0.1 2.6 2 0 0 2 2 2 2 Response regulator receiver domain HATPase_c PF02518.26 gi|452211717|ref|YP_007491831.1| - 3.7e-32 111.1 0.0 1.2e-31 109.6 0.0 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.25 gi|452211717|ref|YP_007491831.1| - 9.3e-19 67.2 0.2 4e-18 65.2 0.0 2.3 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_8 PF13188.7 gi|452211717|ref|YP_007491831.1| - 1.9e-14 53.3 0.0 2.9e-06 27.2 0.0 2.6 2 0 0 2 2 2 2 PAS domain PAS_9 PF13426.7 gi|452211717|ref|YP_007491831.1| - 4.5e-14 52.6 0.1 9.5e-07 29.0 0.0 3.2 3 0 0 3 3 3 2 PAS domain PAS PF00989.25 gi|452211717|ref|YP_007491831.1| - 5.4e-13 48.9 0.0 9.7e-08 32.0 0.0 2.5 2 0 0 2 2 2 2 PAS fold PAS_4 PF08448.10 gi|452211717|ref|YP_007491831.1| - 5.5e-08 33.0 0.0 3.7e-05 23.9 0.0 2.6 2 1 0 2 2 2 2 PAS fold PAS_3 PF08447.12 gi|452211717|ref|YP_007491831.1| - 9.7e-06 25.8 0.0 3.2e-05 24.1 0.0 1.9 2 0 0 2 2 2 1 PAS fold HATPase_c_2 PF13581.6 gi|452211717|ref|YP_007491831.1| - 0.048 13.6 0.0 0.16 12.0 0.0 1.8 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.6 gi|452211717|ref|YP_007491831.1| - 0.11 12.3 0.0 0.25 11.2 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.24 gi|452211718|ref|YP_007491832.1| - 1.9e-26 92.4 0.0 2.1e-26 92.3 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain Peptidase_U32 PF01136.19 gi|452211719|ref|YP_007491833.1| - 2.9e-77 259.0 0.0 3.6e-77 258.7 0.0 1.1 1 0 0 1 1 1 1 Peptidase family U32 Peptidase_U32_C PF16325.5 gi|452211719|ref|YP_007491833.1| - 0.18 12.1 0.0 2.7 8.3 0.0 2.6 3 0 0 3 3 3 0 Peptidase family U32 C-terminal domain PEPcase_2 PF14010.6 gi|452211720|ref|YP_007491834.1| - 5.8e-118 394.5 0.0 6.6e-118 394.3 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxylase Prismane PF03063.20 gi|452211721|ref|YP_007491835.1| - 3.5e-174 580.3 0.0 3.9e-174 580.1 0.0 1.0 1 0 0 1 1 1 1 Prismane/CO dehydrogenase family Fer4_7 PF12838.7 gi|452211723|ref|YP_007491837.1| - 2.8e-08 34.2 4.0 0.00072 20.1 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452211723|ref|YP_007491837.1| - 1.3e-06 28.5 6.8 3e-06 27.3 6.8 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|452211723|ref|YP_007491837.1| - 6.6e-06 25.7 12.6 0.00084 19.1 3.8 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|452211723|ref|YP_007491837.1| - 1.5e-05 25.8 8.5 0.03 15.2 0.2 2.9 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Flavodoxin_5 PF12724.7 gi|452211723|ref|YP_007491837.1| - 4.5e-05 23.7 0.0 7.8e-05 22.9 0.0 1.5 1 1 0 1 1 1 1 Flavodoxin domain Flavodoxin_3 PF12641.7 gi|452211723|ref|YP_007491837.1| - 0.00036 20.3 0.0 0.00058 19.6 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain Fer4_6 PF12837.7 gi|452211723|ref|YP_007491837.1| - 0.00036 20.5 11.1 0.0013 18.7 1.4 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_2 PF12797.7 gi|452211723|ref|YP_007491837.1| - 0.0016 18.4 11.9 0.0072 16.4 2.2 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|452211723|ref|YP_007491837.1| - 0.002 18.2 11.9 0.049 13.7 12.6 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|452211723|ref|YP_007491837.1| - 0.0057 17.1 11.7 0.37 11.3 1.9 2.7 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|452211723|ref|YP_007491837.1| - 0.016 16.1 15.4 0.74 10.9 3.7 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_4 PF12800.7 gi|452211723|ref|YP_007491837.1| - 0.041 14.4 10.9 0.87 10.3 3.6 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_21 PF14697.6 gi|452211723|ref|YP_007491837.1| - 0.057 13.6 2.6 0.057 13.6 2.6 2.5 2 1 1 3 3 3 0 4Fe-4S dicluster domain CENP-F_leu_zip PF10473.9 gi|452211723|ref|YP_007491837.1| - 0.11 12.5 0.2 0.19 11.8 0.2 1.3 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Fer4_22 PF17179.4 gi|452211723|ref|YP_007491837.1| - 0.51 11.2 7.6 0.34 11.8 0.4 2.7 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|452211723|ref|YP_007491837.1| - 0.59 10.7 15.8 0.17 12.5 1.6 2.7 2 1 0 3 3 2 0 4Fe-4S dicluster domain Fez1 PF06818.15 gi|452211725|ref|YP_007491839.1| - 0.018 15.5 7.6 0.021 15.3 7.6 1.1 1 0 0 1 1 1 0 Fez1 EIF4E-T PF10477.9 gi|452211725|ref|YP_007491839.1| - 2.4 6.9 12.4 2.9 6.6 12.4 1.0 1 0 0 1 1 1 0 Nucleocytoplasmic shuttling protein for mRNA cap-binding EIF4E DUF1943 PF09172.11 gi|452211725|ref|YP_007491839.1| - 7.1 5.8 9.3 8.5 5.5 9.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1943) HTH_27 PF13463.6 gi|452211726|ref|YP_007491840.1| - 2.7e-05 24.6 0.1 6.7e-05 23.3 0.1 1.7 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|452211726|ref|YP_007491840.1| - 0.00036 20.3 0.0 0.00062 19.6 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|452211726|ref|YP_007491840.1| - 0.00037 20.0 1.0 0.00068 19.1 1.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 gi|452211726|ref|YP_007491840.1| - 0.0019 18.1 0.1 0.004 17.1 0.1 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain MarR PF01047.22 gi|452211726|ref|YP_007491840.1| - 0.0055 16.6 0.1 0.011 15.6 0.1 1.5 1 0 0 1 1 1 1 MarR family CarboxypepD_reg PF13620.6 gi|452211726|ref|YP_007491840.1| - 0.0094 16.2 0.0 0.021 15.1 0.0 1.7 1 0 0 1 1 1 1 Carboxypeptidase regulatory-like domain Y_Y_Y PF07495.13 gi|452211726|ref|YP_007491840.1| - 0.014 15.4 0.3 0.033 14.1 0.3 1.7 1 0 0 1 1 1 0 Y_Y_Y domain Endomucin PF07010.12 gi|452211726|ref|YP_007491840.1| - 0.025 14.6 0.3 0.031 14.2 0.3 1.2 1 0 0 1 1 1 0 Endomucin HTH_micro PF17007.5 gi|452211726|ref|YP_007491840.1| - 0.038 12.8 0.0 0.055 12.3 0.0 1.2 1 0 0 1 1 1 0 HTH-like Chordopox_A13L PF05961.11 gi|452211726|ref|YP_007491840.1| - 0.063 13.5 0.1 0.3 11.4 0.1 2.0 2 0 0 2 2 2 0 Chordopoxvirus A13L protein DUF4349 PF14257.6 gi|452211726|ref|YP_007491840.1| - 0.25 10.7 0.9 1.1 8.7 0.5 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4349) Yae1_N PF09811.9 gi|452211727|ref|YP_007491841.1| - 0.00022 20.8 0.3 0.15 11.8 0.1 2.2 2 0 0 2 2 2 2 Essential protein Yae1, N terminal O-antigen_lig PF13425.6 gi|452211727|ref|YP_007491841.1| - 0.0049 15.7 0.4 0.0053 15.6 0.4 1.0 1 0 0 1 1 1 1 O-antigen ligase like membrane protein DUF4179 PF13786.6 gi|452211727|ref|YP_007491841.1| - 0.034 14.6 0.4 0.041 14.4 0.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4179) CRA PF06589.11 gi|452211727|ref|YP_007491841.1| - 0.041 14.0 0.2 0.061 13.4 0.1 1.4 1 1 0 1 1 1 0 Circumsporozoite-related antigen (CRA) Seadorna_Vp10 PF07322.11 gi|452211727|ref|YP_007491841.1| - 0.098 12.0 0.9 0.27 10.6 0.1 1.8 1 1 1 2 2 2 0 Seadornavirus Vp10 Glyoxalase_2 PF12681.7 gi|452211728|ref|YP_007491842.1| - 0.0003 20.7 0.0 0.00047 20.1 0.0 1.2 1 1 0 1 1 1 1 Glyoxalase-like domain Glyoxalase PF00903.25 gi|452211728|ref|YP_007491842.1| - 0.0029 17.8 0.0 0.033 14.4 0.0 2.0 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glycos_transf_2 PF00535.26 gi|452211729|ref|YP_007491843.1| - 0.02 14.7 0.0 0.034 13.9 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.6 gi|452211729|ref|YP_007491843.1| - 0.054 13.4 0.0 0.11 12.4 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 gi|452211729|ref|YP_007491843.1| - 0.16 11.8 0.0 8.9 6.1 0.0 2.1 1 1 0 2 2 2 0 Glycosyltransferase like family 2 Polysacc_synt PF01943.17 gi|452211731|ref|YP_007491845.1| - 2.2e-32 112.6 24.7 2.2e-32 112.6 24.7 2.8 2 1 1 3 3 3 1 Polysaccharide biosynthesis protein Polysacc_synt_3 PF13440.6 gi|452211731|ref|YP_007491845.1| - 1.5e-18 67.0 20.0 1.5e-18 67.0 20.0 1.8 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|452211731|ref|YP_007491845.1| - 9.3e-14 51.7 17.9 9.3e-14 51.7 17.9 4.2 3 1 1 4 4 4 2 Polysaccharide biosynthesis C-terminal domain MatE PF01554.18 gi|452211731|ref|YP_007491845.1| - 1.8e-13 50.5 16.0 1.8e-13 50.5 16.0 3.6 3 0 0 3 3 3 2 MatE DUF2873 PF11395.8 gi|452211731|ref|YP_007491845.1| - 0.041 13.7 0.2 0.041 13.7 0.2 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2873) Mito_morph_reg PF14972.6 gi|452211731|ref|YP_007491845.1| - 0.28 10.8 3.1 15 5.1 1.3 2.6 2 0 0 2 2 2 0 Mitochondrial morphogenesis regulator ATP-grasp_4 PF13535.6 gi|452211732|ref|YP_007491846.1| - 9.6e-61 204.1 0.1 1.5e-60 203.4 0.1 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.14 gi|452211732|ref|YP_007491846.1| - 0.0011 19.0 0.0 0.0023 18.0 0.0 1.6 1 1 0 1 1 1 1 ATP-grasp domain THUMP PF02926.17 gi|452211732|ref|YP_007491846.1| - 0.065 13.3 3.8 0.59 10.2 0.6 2.9 3 1 0 3 3 3 0 THUMP domain Kinesin PF00225.23 gi|452211732|ref|YP_007491846.1| - 0.079 11.9 0.0 0.12 11.3 0.0 1.2 1 0 0 1 1 1 0 Kinesin motor domain SpoIIAA-like PF11964.8 gi|452211733|ref|YP_007491847.1| - 1.9e-17 64.1 0.1 2.1e-17 63.9 0.1 1.0 1 0 0 1 1 1 1 SpoIIAA-like ABC_tran PF00005.27 gi|452211735|ref|YP_007491849.1| - 1e-17 65.0 0.1 2.4e-17 63.7 0.0 1.6 2 0 0 2 2 2 1 ABC transporter DUF4162 PF13732.6 gi|452211735|ref|YP_007491849.1| - 1.5e-11 44.9 0.1 8.4e-11 42.4 0.0 2.1 2 1 1 3 3 3 1 Domain of unknown function (DUF4162) AAA_21 PF13304.6 gi|452211735|ref|YP_007491849.1| - 1.4e-08 34.9 0.1 2.1e-08 34.3 0.1 1.2 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system ABC2_membrane PF01061.24 gi|452211736|ref|YP_007491850.1| - 1.3e-24 86.8 25.7 1.3e-24 86.8 25.7 1.7 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|452211736|ref|YP_007491850.1| - 1.7e-12 47.1 28.6 1.7e-12 47.1 28.6 1.7 1 1 1 2 2 2 1 ABC-2 family transporter protein adh_short PF00106.25 gi|452211738|ref|YP_007491852.1| - 2.1e-61 206.8 0.1 2.4e-61 206.6 0.1 1.0 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|452211738|ref|YP_007491852.1| - 1.4e-49 168.8 0.0 1.8e-49 168.4 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|452211738|ref|YP_007491852.1| - 3.7e-12 46.5 0.0 5e-12 46.1 0.0 1.1 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|452211738|ref|YP_007491852.1| - 0.00099 18.6 0.1 0.0018 17.8 0.1 1.5 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.15 gi|452211738|ref|YP_007491852.1| - 0.0088 15.2 0.0 0.0096 15.1 0.0 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.19 gi|452211738|ref|YP_007491852.1| - 0.023 13.7 0.1 0.029 13.4 0.1 1.2 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family THF_DHG_CYH_C PF02882.19 gi|452211738|ref|YP_007491852.1| - 0.083 12.2 0.1 0.16 11.3 0.1 1.4 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Shikimate_DH PF01488.20 gi|452211738|ref|YP_007491852.1| - 0.11 12.6 0.2 0.19 11.8 0.2 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Pribosyltran PF00156.27 gi|452211740|ref|YP_007491854.1| - 1.1e-26 93.2 0.3 1.5e-26 92.8 0.3 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|452211740|ref|YP_007491854.1| - 0.00026 20.5 0.2 0.00053 19.5 0.2 1.6 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase Pribosyl_synth PF14572.6 gi|452211740|ref|YP_007491854.1| - 0.016 15.3 0.2 0.022 14.8 0.2 1.2 1 0 0 1 1 1 0 Phosphoribosyl synthetase-associated domain PRTase_2 PF15609.6 gi|452211740|ref|YP_007491854.1| - 0.016 14.7 0.1 0.036 13.6 0.0 1.6 2 0 0 2 2 2 0 Phosphoribosyl transferase Unstab_antitox PF09720.10 gi|452211740|ref|YP_007491854.1| - 0.058 13.5 0.1 0.15 12.1 0.1 1.6 1 0 0 1 1 1 0 Putative addiction module component DDE_3 PF13358.6 gi|452211741|ref|YP_007491855.1| - 1.9e-28 99.0 0.0 2.6e-28 98.6 0.0 1.2 1 0 0 1 1 1 1 DDE superfamily endonuclease HTH_32 PF13565.6 gi|452211742|ref|YP_007491856.1| - 6.1e-16 58.8 0.1 1.9e-13 50.8 0.0 2.1 2 0 0 2 2 2 2 Homeodomain-like domain HTH_29 PF13551.6 gi|452211742|ref|YP_007491856.1| - 3.9e-12 46.0 0.1 3.3e-11 43.0 0.0 2.1 2 0 0 2 2 2 1 Winged helix-turn helix HTH_23 PF13384.6 gi|452211742|ref|YP_007491856.1| - 7.1e-08 32.0 0.1 5.3e-06 26.1 0.0 2.4 2 0 0 2 2 2 1 Homeodomain-like domain HTH_28 PF13518.6 gi|452211742|ref|YP_007491856.1| - 0.009 16.1 0.0 0.2 11.8 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|452211742|ref|YP_007491856.1| - 0.046 13.7 0.2 0.44 10.6 0.0 2.2 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain PHO4 PF01384.20 gi|452211744|ref|YP_007491858.1| - 3.6e-96 322.1 41.4 1e-95 320.6 41.4 1.6 1 1 0 1 1 1 1 Phosphate transporter family PhoU_div PF01865.16 gi|452211745|ref|YP_007491859.1| - 2.2e-48 164.4 0.4 2.5e-48 164.2 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF47 PhoU PF01895.19 gi|452211745|ref|YP_007491859.1| - 0.0016 18.8 0.8 1.2 9.7 0.1 2.5 2 0 0 2 2 2 2 PhoU domain DUF2970 PF11174.8 gi|452211746|ref|YP_007491860.1| - 0.0038 17.0 1.4 0.0038 17.0 1.4 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF2970) HTH_3 PF01381.22 gi|452211747|ref|YP_007491861.1| - 1.1e-13 51.0 0.1 1.6e-13 50.5 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|452211747|ref|YP_007491861.1| - 2.1e-06 27.7 0.2 3.9e-06 26.8 0.2 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|452211747|ref|YP_007491861.1| - 4.1e-06 27.1 0.0 4.6e-06 26.9 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|452211747|ref|YP_007491861.1| - 0.00015 22.2 0.0 0.00023 21.6 0.0 1.3 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_24 PF13412.6 gi|452211747|ref|YP_007491861.1| - 0.0071 15.9 0.1 0.011 15.2 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 gi|452211747|ref|YP_007491861.1| - 0.0083 16.1 0.1 0.019 14.9 0.1 1.5 1 0 0 1 1 1 1 HTH domain HTH_Crp_2 PF13545.6 gi|452211747|ref|YP_007491861.1| - 0.018 15.0 0.0 0.048 13.6 0.0 1.7 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_10 PF04967.12 gi|452211747|ref|YP_007491861.1| - 0.042 13.7 0.1 0.19 11.6 0.0 1.9 2 0 0 2 2 2 0 HTH DNA binding domain HTH_23 PF13384.6 gi|452211747|ref|YP_007491861.1| - 0.058 13.2 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain Sigma70_r4 PF04545.16 gi|452211747|ref|YP_007491861.1| - 0.15 11.6 0.0 0.3 10.6 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_7 PF02796.15 gi|452211747|ref|YP_007491861.1| - 0.19 11.8 0.2 0.5 10.5 0.1 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase YdaS_antitoxin PF15943.5 gi|452211747|ref|YP_007491861.1| - 0.21 11.5 0.0 0.31 10.9 0.0 1.3 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_AsnC-type PF13404.6 gi|452211747|ref|YP_007491861.1| - 0.23 11.3 0.0 0.33 10.8 0.0 1.2 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HK PF02110.15 gi|452211748|ref|YP_007491862.1| - 1.4e-70 237.5 4.2 8e-45 153.1 0.6 2.0 1 1 1 2 2 2 2 Hydroxyethylthiazole kinase family Phos_pyr_kin PF08543.12 gi|452211748|ref|YP_007491862.1| - 8.5e-05 22.0 3.1 0.017 14.5 0.2 2.1 1 1 1 2 2 2 2 Phosphomethylpyrimidine kinase NikR_C PF08753.11 gi|452211748|ref|YP_007491862.1| - 0.16 12.2 0.0 0.27 11.4 0.0 1.4 1 0 0 1 1 1 0 NikR C terminal nickel binding domain TMP-TENI PF02581.17 gi|452211749|ref|YP_007491863.1| - 2.2e-56 190.1 2.1 2.9e-56 189.7 2.1 1.1 1 0 0 1 1 1 1 Thiamine monophosphate synthase Ribul_P_3_epim PF00834.19 gi|452211749|ref|YP_007491863.1| - 0.004 16.6 1.2 0.0062 15.9 0.3 1.7 2 0 0 2 2 2 1 Ribulose-phosphate 3 epimerase family His_biosynth PF00977.21 gi|452211749|ref|YP_007491863.1| - 0.071 12.6 5.1 0.15 11.5 0.4 2.2 1 1 1 2 2 2 0 Histidine biosynthesis protein DUF308 PF03729.13 gi|452211751|ref|YP_007491865.1| - 3.8e-14 52.7 44.4 1.8e-10 41.0 14.0 3.1 2 1 1 3 3 3 3 Short repeat of unknown function (DUF308) Reprolysin_3 PF13582.6 gi|452211753|ref|YP_007491867.1| - 0.11 13.0 0.1 0.16 12.5 0.1 1.4 1 1 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Radical_SAM PF04055.21 gi|452211754|ref|YP_007491868.1| - 1.8e-16 60.9 0.0 1.4e-15 58.0 0.0 2.1 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|452211754|ref|YP_007491868.1| - 1.5e-09 38.2 0.0 2.6e-09 37.5 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|452211754|ref|YP_007491868.1| - 1.3e-06 28.5 0.0 3.3e-06 27.2 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain GCIP PF13324.6 gi|452211754|ref|YP_007491868.1| - 0.033 13.8 0.0 0.044 13.4 0.0 1.1 1 0 0 1 1 1 0 Grap2 and cyclin-D-interacting DUF308 PF03729.13 gi|452211755|ref|YP_007491869.1| - 2.1e-05 24.7 3.3 2.1e-05 24.7 3.3 1.0 1 0 0 1 1 1 1 Short repeat of unknown function (DUF308) DUF4190 PF13828.6 gi|452211755|ref|YP_007491869.1| - 0.00037 20.2 1.8 0.00047 19.9 1.8 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4190) DUF131 PF01998.17 gi|452211756|ref|YP_007491870.1| - 0.023 14.3 0.1 0.023 14.3 0.1 2.7 2 1 0 2 2 2 0 Protein of unknown function DUF131 NB-ARC PF00931.22 gi|452211757|ref|YP_007491871.1| - 1.2e-13 50.9 0.1 2.9e-13 49.6 0.1 1.5 1 1 0 1 1 1 1 NB-ARC domain AAA_16 PF13191.6 gi|452211757|ref|YP_007491871.1| - 0.06 13.7 0.2 0.14 12.5 0.1 1.8 2 1 0 2 2 2 0 AAA ATPase domain RuvB_N PF05496.12 gi|452211757|ref|YP_007491871.1| - 0.09 12.5 0.0 0.17 11.6 0.0 1.5 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain ABC_tran PF00005.27 gi|452211757|ref|YP_007491871.1| - 0.15 12.6 0.3 0.36 11.3 0.1 1.8 1 1 1 2 2 2 0 ABC transporter NACHT PF05729.12 gi|452211757|ref|YP_007491871.1| - 0.2 11.6 1.9 1.7 8.5 1.9 2.4 1 1 0 1 1 1 0 NACHT domain BRD4_CDT PF17105.5 gi|452211757|ref|YP_007491871.1| - 0.25 11.0 2.0 0.46 10.1 2.0 1.3 1 0 0 1 1 1 0 C-terminal domain of bromodomain protein 4 DDE_Tnp_IS66 PF03050.14 gi|452211758|ref|YP_007491872.1| - 2.5e-23 83.0 0.3 2.8e-23 82.8 0.3 1.0 1 0 0 1 1 1 1 Transposase IS66 family Endonuc_Holl PF10107.9 gi|452211763|ref|YP_007491877.1| - 2.4e-66 222.6 0.3 3e-66 222.2 0.3 1.1 1 0 0 1 1 1 1 Endonuclease related to archaeal Holliday junction resolvase DUF4263 PF14082.6 gi|452211763|ref|YP_007491877.1| - 0.018 15.3 0.0 0.023 15.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4263) MS_channel PF00924.18 gi|452211765|ref|YP_007491879.1| - 1.3e-36 126.1 0.1 1.7e-36 125.7 0.1 1.1 1 0 0 1 1 1 1 Mechanosensitive ion channel UCR_14kD PF02271.16 gi|452211765|ref|YP_007491879.1| - 0.0061 16.5 0.0 0.013 15.5 0.0 1.5 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase complex 14kD subunit DUF421 PF04239.12 gi|452211766|ref|YP_007491880.1| - 5.9e-11 42.1 0.0 8.5e-11 41.6 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF421) YpzI PF14140.6 gi|452211766|ref|YP_007491880.1| - 0.033 13.9 0.0 0.058 13.2 0.0 1.3 1 0 0 1 1 1 0 YpzI-like protein DUF1146 PF06612.11 gi|452211766|ref|YP_007491880.1| - 0.11 12.5 1.8 0.21 11.7 1.8 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1146) MS_channel PF00924.18 gi|452211767|ref|YP_007491881.1| - 3.1e-28 98.7 3.8 6.8e-28 97.6 3.8 1.5 1 1 0 1 1 1 1 Mechanosensitive ion channel Phage_holin_5_2 PF16079.5 gi|452211767|ref|YP_007491881.1| - 4.6 7.6 6.3 1.8 8.9 0.4 3.0 4 0 0 4 4 4 0 Phage holin family Hol44, in holin superfamily V AzlC PF03591.14 gi|452211768|ref|YP_007491882.1| - 2.3e-43 147.9 9.0 2.3e-43 147.9 9.0 1.7 2 0 0 2 2 2 1 AzlC protein AzlD PF05437.12 gi|452211769|ref|YP_007491883.1| - 8.2e-22 77.2 6.3 9.3e-22 77.1 6.3 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport protein (AzlD) NIR_SIR PF01077.22 gi|452211770|ref|YP_007491884.1| - 2.1e-32 111.9 0.1 3.3e-32 111.2 0.1 1.2 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.17 gi|452211770|ref|YP_007491884.1| - 5.5e-20 71.0 0.0 1e-19 70.2 0.0 1.5 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain Fer4 PF00037.27 gi|452211770|ref|YP_007491884.1| - 3.6e-13 48.7 13.3 4.9e-07 29.3 2.4 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|452211770|ref|YP_007491884.1| - 1.8e-08 34.1 12.1 2.2e-05 24.3 2.2 3.3 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|452211770|ref|YP_007491884.1| - 2.2e-08 34.5 39.6 8.7e-07 29.4 13.1 2.6 2 1 2 4 4 3 3 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452211770|ref|YP_007491884.1| - 2.1e-07 31.0 13.2 2.1e-07 31.0 13.2 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|452211770|ref|YP_007491884.1| - 5.6e-06 26.4 13.8 5.6e-06 26.4 13.8 2.2 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|452211770|ref|YP_007491884.1| - 2.4e-05 24.4 21.8 0.0025 17.9 4.5 2.8 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452211770|ref|YP_007491884.1| - 0.00012 21.9 12.1 0.0017 18.3 2.7 3.4 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|452211770|ref|YP_007491884.1| - 0.0038 17.6 14.4 0.014 15.9 4.8 3.9 4 1 0 4 4 3 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|452211770|ref|YP_007491884.1| - 0.0081 17.1 17.4 0.14 13.1 5.5 3.0 2 1 1 3 3 2 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.6 gi|452211770|ref|YP_007491884.1| - 0.046 14.2 0.2 0.046 14.2 0.2 2.9 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|452211770|ref|YP_007491884.1| - 0.061 14.3 3.8 0.061 14.3 3.8 4.1 4 1 1 5 5 3 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|452211770|ref|YP_007491884.1| - 0.081 13.8 14.9 0.24 12.3 3.6 2.8 2 1 1 3 3 2 0 4Fe-4S dicluster domain DUF561 PF04481.12 gi|452211770|ref|YP_007491884.1| - 0.12 11.5 0.0 0.21 10.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF561) Fer4_18 PF13746.6 gi|452211770|ref|YP_007491884.1| - 0.15 12.3 8.9 0.36 11.0 8.9 1.6 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|452211770|ref|YP_007491884.1| - 4.2 8.0 18.9 1.5 9.4 3.4 3.6 3 0 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_17 PF13534.6 gi|452211770|ref|YP_007491884.1| - 7.6 7.2 22.0 5.1 7.7 2.7 2.8 1 1 1 2 2 2 0 4Fe-4S dicluster domain Bactofilin PF04519.13 gi|452211773|ref|YP_007491887.1| - 2.7e-06 27.6 12.5 8.4e-05 22.8 2.8 2.3 1 1 1 2 2 2 2 Polymer-forming cytoskeletal FapA PF03961.13 gi|452211773|ref|YP_007491887.1| - 0.00087 18.0 14.7 0.052 12.2 14.7 2.1 1 1 0 1 1 1 1 Flagellar Assembly Protein A DUF2207 PF09972.9 gi|452211773|ref|YP_007491887.1| - 1.3 7.7 0.0 1.3 7.7 0.0 3.1 1 1 2 3 3 3 0 Predicted membrane protein (DUF2207) Nitroreductase PF00881.24 gi|452211774|ref|YP_007491888.1| - 9.7e-29 100.6 0.0 1.7e-13 51.0 0.0 2.0 1 1 1 2 2 2 2 Nitroreductase family TM1586_NiRdase PF14512.6 gi|452211774|ref|YP_007491888.1| - 2.9e-11 43.4 0.0 0.0015 18.2 0.0 3.1 2 1 1 3 3 3 3 Putative TM nitroreductase Hexapep PF00132.24 gi|452211775|ref|YP_007491889.1| - 1.7e-08 33.8 12.3 5.9e-06 25.8 3.1 2.4 2 0 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|452211775|ref|YP_007491889.1| - 5.5e-05 22.8 10.1 0.0021 17.8 3.6 2.7 2 0 0 2 2 2 2 Hexapeptide repeat of succinyl-transferase FeThRed_B PF02943.15 gi|452211777|ref|YP_007491891.1| - 4e-22 78.2 1.0 4e-22 78.2 1.0 1.5 2 0 0 2 2 2 1 Ferredoxin thioredoxin reductase catalytic beta chain HypA PF01155.19 gi|452211777|ref|YP_007491891.1| - 0.028 14.4 4.3 0.095 12.7 1.3 2.1 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF3235 PF11574.8 gi|452211777|ref|YP_007491891.1| - 0.18 12.7 0.1 0.38 11.6 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3235) Glutaredoxin PF00462.24 gi|452211778|ref|YP_007491892.1| - 1.2e-12 47.9 0.1 1.8e-12 47.3 0.1 1.3 1 0 0 1 1 1 1 Glutaredoxin GST_N_3 PF13417.6 gi|452211778|ref|YP_007491892.1| - 0.0037 17.6 0.0 0.0044 17.4 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Thioredoxin_3 PF13192.6 gi|452211778|ref|YP_007491892.1| - 0.018 15.1 0.5 0.073 13.1 0.5 1.9 1 1 0 1 1 1 0 Thioredoxin domain GST_N_2 PF13409.6 gi|452211778|ref|YP_007491892.1| - 0.019 15.2 0.0 0.025 14.9 0.0 1.1 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Thioredoxin_2 PF13098.6 gi|452211778|ref|YP_007491892.1| - 0.047 14.2 0.1 0.18 12.3 0.1 1.8 1 1 0 1 1 1 0 Thioredoxin-like domain MFS_1 PF07690.16 gi|452211779|ref|YP_007491893.1| - 5.2e-57 193.4 42.5 5.2e-57 193.4 42.5 2.2 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|452211779|ref|YP_007491893.1| - 3.7e-12 45.8 13.8 3.7e-12 45.8 13.8 2.8 2 2 0 2 2 2 2 Sugar (and other) transporter MFS_1_like PF12832.7 gi|452211779|ref|YP_007491893.1| - 2e-08 33.5 25.5 3.3e-06 26.2 8.2 2.4 2 1 0 2 2 2 2 MFS_1 like family MFS_3 PF05977.13 gi|452211779|ref|YP_007491893.1| - 3.5e-07 29.0 11.7 5.7e-07 28.3 3.9 2.5 2 1 0 2 2 2 2 Transmembrane secretion effector MFS_2 PF13347.6 gi|452211779|ref|YP_007491893.1| - 6.5e-06 25.0 32.9 1.9e-05 23.5 16.5 2.4 2 0 0 2 2 2 2 MFS/sugar transport protein PUCC PF03209.15 gi|452211779|ref|YP_007491893.1| - 2.3e-05 23.6 15.9 0.00024 20.3 5.4 2.4 2 0 0 2 2 2 2 PUCC protein OATP PF03137.20 gi|452211779|ref|YP_007491893.1| - 1.4 7.1 29.2 0.085 11.1 1.9 4.1 2 2 2 4 4 4 0 Organic Anion Transporter Polypeptide (OATP) family DUF21 PF01595.20 gi|452211781|ref|YP_007491895.1| - 2.6e-36 125.0 0.4 3.6e-36 124.5 0.4 1.1 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain DUF21 PF01595.20 gi|452211782|ref|YP_007491896.1| - 3.6e-46 157.1 6.5 5.8e-46 156.4 6.5 1.2 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain CorC_HlyC PF03471.17 gi|452211782|ref|YP_007491896.1| - 1.3e-20 73.2 0.0 3.6e-20 71.7 0.0 1.8 1 0 0 1 1 1 1 Transporter associated domain CBS PF00571.28 gi|452211782|ref|YP_007491896.1| - 2.8e-16 59.7 3.9 1.8e-07 31.5 0.1 2.6 2 0 0 2 2 2 2 CBS domain DJ-1_PfpI PF01965.24 gi|452211783|ref|YP_007491897.1| - 6.7e-39 133.3 0.2 7.6e-39 133.2 0.2 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family ThiJ_like PF17124.5 gi|452211783|ref|YP_007491897.1| - 0.0078 15.9 0.3 0.87 9.2 0.0 2.6 1 1 0 2 2 2 2 ThiJ/PfpI family-like PS_pyruv_trans PF04230.13 gi|452211783|ref|YP_007491897.1| - 0.11 12.4 0.0 0.13 12.1 0.0 1.3 1 1 0 1 1 1 0 Polysaccharide pyruvyl transferase DUF92 PF01940.16 gi|452211784|ref|YP_007491898.1| - 1.6e-53 181.6 14.8 1.6e-53 181.6 14.8 2.6 2 1 0 2 2 2 1 Integral membrane protein DUF92 DUF5316 PF17247.2 gi|452211784|ref|YP_007491898.1| - 0.0021 18.0 0.1 0.013 15.5 0.1 2.4 1 0 0 1 1 1 1 Family of unknown function (DUF5316) DUF4175 PF13779.6 gi|452211784|ref|YP_007491898.1| - 0.14 10.0 1.7 0.24 9.3 1.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4175) Pyr_redox_2 PF07992.14 gi|452211785|ref|YP_007491899.1| - 7.1e-41 140.4 0.0 1e-40 139.8 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|452211785|ref|YP_007491899.1| - 4.1e-21 75.3 0.8 1.7e-20 73.3 0.2 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 gi|452211785|ref|YP_007491899.1| - 3.3e-13 50.0 0.0 1e-12 48.4 0.0 1.9 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|452211785|ref|YP_007491899.1| - 1.9e-07 30.6 0.0 5.3e-07 29.2 0.0 1.7 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 gi|452211785|ref|YP_007491899.1| - 0.00094 18.4 0.1 0.24 10.5 0.1 2.5 2 1 1 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) FAD_binding_2 PF00890.24 gi|452211785|ref|YP_007491899.1| - 0.038 13.1 0.0 0.074 12.1 0.0 1.4 1 0 0 1 1 1 0 FAD binding domain Helicase_C_2 PF13307.6 gi|452211786|ref|YP_007491900.1| - 2.3e-20 73.5 0.0 4e-20 72.7 0.0 1.4 1 0 0 1 1 1 1 Helicase C-terminal domain ResIII PF04851.15 gi|452211786|ref|YP_007491900.1| - 2.3e-07 31.0 0.0 5.9e-07 29.6 0.0 1.7 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD_2 PF06733.15 gi|452211786|ref|YP_007491900.1| - 0.0018 17.9 0.0 0.0038 16.9 0.0 1.6 1 0 0 1 1 1 1 DEAD_2 AAA_16 PF13191.6 gi|452211786|ref|YP_007491900.1| - 0.003 18.0 0.0 0.0078 16.6 0.0 1.6 1 0 0 1 1 1 1 AAA ATPase domain Rit1_C PF17184.4 gi|452211786|ref|YP_007491900.1| - 0.056 12.9 0.1 0.11 12.0 0.1 1.4 1 0 0 1 1 1 0 Rit1 N-terminal domain T2SSE PF00437.20 gi|452211786|ref|YP_007491900.1| - 0.063 12.3 0.0 0.19 10.8 0.0 1.7 1 0 0 1 1 1 0 Type II/IV secretion system protein DEAD PF00270.29 gi|452211786|ref|YP_007491900.1| - 0.1 12.3 0.0 0.27 11.0 0.0 2.1 1 1 0 1 1 1 0 DEAD/DEAH box helicase Pyrophosphatase PF00719.19 gi|452211787|ref|YP_007491901.1| - 5e-06 26.4 0.0 6.6e-06 26.0 0.0 1.1 1 0 0 1 1 1 1 Inorganic pyrophosphatase Radical_SAM PF04055.21 gi|452211788|ref|YP_007491902.1| - 7.5e-17 62.2 0.3 1.3e-16 61.4 0.0 1.5 2 0 0 2 2 2 1 Radical SAM superfamily SPASM PF13186.6 gi|452211788|ref|YP_007491902.1| - 2.5e-06 27.9 0.0 8e-06 26.3 0.0 2.0 1 1 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.6 gi|452211788|ref|YP_007491902.1| - 0.00024 21.4 0.0 0.0005 20.3 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|452211788|ref|YP_007491902.1| - 0.0061 16.7 0.0 0.011 15.8 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Metallophos PF00149.28 gi|452211789|ref|YP_007491903.1| - 6.1e-11 43.2 0.2 1e-10 42.5 0.2 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|452211789|ref|YP_007491903.1| - 3.2e-05 24.2 0.0 6.7e-05 23.1 0.0 1.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain CoA_binding_2 PF13380.6 gi|452211789|ref|YP_007491903.1| - 0.007 16.9 0.0 0.02 15.4 0.0 1.8 1 1 0 1 1 1 1 CoA binding domain DUF3021 PF11457.8 gi|452211791|ref|YP_007491905.1| - 0.027 14.8 1.8 0.034 14.5 1.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3021) DUF1317 PF07026.11 gi|452211791|ref|YP_007491905.1| - 0.16 11.8 0.0 0.17 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1317) Pox_A28 PF04584.14 gi|452211791|ref|YP_007491905.1| - 0.22 11.7 1.5 0.25 11.5 1.5 1.2 1 0 0 1 1 1 0 Poxvirus A28 family CBM_X2 PF03442.14 gi|452211792|ref|YP_007491906.1| - 0.029 14.5 0.1 0.073 13.2 0.1 1.6 1 0 0 1 1 1 0 Carbohydrate binding domain X2 Flavin_Reduct PF01613.18 gi|452211794|ref|YP_007491908.1| - 4.2e-19 69.1 0.0 5.5e-19 68.7 0.0 1.1 1 0 0 1 1 1 1 Flavin reductase like domain DUF447 PF04289.12 gi|452211794|ref|YP_007491908.1| - 0.053 13.3 0.0 0.067 13.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF447) UvrB_inter PF17757.1 gi|452211795|ref|YP_007491909.1| - 6e-30 103.3 0.6 1.7e-29 101.9 0.6 1.8 1 0 0 1 1 1 1 UvrB interaction domain UvrB PF12344.8 gi|452211795|ref|YP_007491909.1| - 4.4e-21 74.4 1.6 4.4e-21 74.4 1.6 2.0 2 0 0 2 2 1 1 Ultra-violet resistance protein B Helicase_C PF00271.31 gi|452211795|ref|YP_007491909.1| - 4.4e-18 65.6 0.3 1.2e-17 64.3 0.3 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|452211795|ref|YP_007491909.1| - 3.4e-13 49.9 0.1 2.6e-11 43.8 0.0 3.0 2 1 0 3 3 3 1 Type III restriction enzyme, res subunit UVR PF02151.19 gi|452211795|ref|YP_007491909.1| - 4.5e-09 35.8 2.3 2.3e-08 33.5 2.3 2.4 1 0 0 1 1 1 1 UvrB/uvrC motif DEAD PF00270.29 gi|452211795|ref|YP_007491909.1| - 8e-05 22.5 0.1 0.0089 15.8 0.0 3.4 3 1 0 3 3 3 1 DEAD/DEAH box helicase AAA_30 PF13604.6 gi|452211795|ref|YP_007491909.1| - 0.0055 16.5 0.0 0.079 12.7 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_19 PF13245.6 gi|452211795|ref|YP_007491909.1| - 0.022 15.1 0.4 11 6.3 0.0 2.6 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 gi|452211795|ref|YP_007491909.1| - 0.027 14.8 0.1 0.6 10.4 0.0 3.1 4 1 0 4 4 4 0 AAA domain AAA_16 PF13191.6 gi|452211795|ref|YP_007491909.1| - 0.034 14.5 0.0 0.32 11.4 0.0 2.4 2 1 0 2 2 2 0 AAA ATPase domain Ribonuc_red_lgN PF00317.21 gi|452211795|ref|YP_007491909.1| - 0.06 13.3 0.0 0.38 10.8 0.0 2.3 2 1 0 2 2 2 0 Ribonucleotide reductase, all-alpha domain DUF87 PF01935.17 gi|452211795|ref|YP_007491909.1| - 0.064 13.4 2.8 0.13 12.4 0.2 2.6 3 0 0 3 3 3 0 Helicase HerA, central domain Flavi_DEAD PF07652.14 gi|452211795|ref|YP_007491909.1| - 0.065 13.2 0.6 0.34 10.9 0.2 2.4 3 0 0 3 3 3 0 Flavivirus DEAD domain AAA PF00004.29 gi|452211795|ref|YP_007491909.1| - 0.083 13.3 1.1 2.9 8.3 0.0 3.3 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) SWI2_SNF2 PF18766.1 gi|452211795|ref|YP_007491909.1| - 0.086 12.5 1.2 0.94 9.1 0.0 2.9 4 0 0 4 4 4 0 SWI2/SNF2 ATPase Tim44 PF04280.15 gi|452211795|ref|YP_007491909.1| - 0.11 12.6 0.8 2.4 8.3 0.1 2.5 2 0 0 2 2 2 0 Tim44-like domain UvrC_HhH_N PF08459.11 gi|452211796|ref|YP_007491910.1| - 4.5e-52 176.1 0.6 9.1e-52 175.0 0.0 1.8 2 0 0 2 2 2 1 UvrC Helix-hairpin-helix N-terminal GIY-YIG PF01541.24 gi|452211796|ref|YP_007491910.1| - 7.1e-09 35.8 0.0 2.2e-08 34.3 0.0 1.9 1 0 0 1 1 1 1 GIY-YIG catalytic domain UVR PF02151.19 gi|452211796|ref|YP_007491910.1| - 8.9e-08 31.6 7.8 2.4e-07 30.2 7.8 1.8 1 0 0 1 1 1 1 UvrB/uvrC motif UvrA_DNA-bind PF17755.1 gi|452211797|ref|YP_007491911.1| - 2.9e-31 108.1 0.1 2.3e-29 101.9 0.0 3.0 3 0 0 3 3 2 1 UvrA DNA-binding domain UvrA_inter PF17760.1 gi|452211797|ref|YP_007491911.1| - 2.3e-30 104.9 0.2 3.9e-29 100.9 0.0 2.8 3 0 0 3 3 3 1 UvrA interaction domain ABC_tran PF00005.27 gi|452211797|ref|YP_007491911.1| - 1.2e-20 74.4 1.6 1.9e-08 34.9 0.1 4.5 4 1 0 4 4 3 3 ABC transporter SMC_N PF02463.19 gi|452211797|ref|YP_007491911.1| - 1.4e-11 44.2 0.0 0.00034 20.1 0.0 3.8 3 1 0 3 3 3 3 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|452211797|ref|YP_007491911.1| - 6e-10 39.8 0.3 0.0015 18.9 0.0 3.6 2 1 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.6 gi|452211797|ref|YP_007491911.1| - 8.4e-09 35.0 0.4 0.0038 16.9 0.3 2.7 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_21 PF13304.6 gi|452211797|ref|YP_007491911.1| - 1.1e-08 35.2 4.3 0.046 13.5 0.1 4.6 4 0 0 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|452211797|ref|YP_007491911.1| - 1.7e-06 28.4 1.3 0.27 11.5 0.0 4.1 4 0 0 4 4 4 2 AAA domain AAA_14 PF13173.6 gi|452211797|ref|YP_007491911.1| - 1.1e-05 25.5 0.0 0.52 10.4 0.0 3.4 3 0 0 3 3 3 2 AAA domain DnaJ_CXXCXGXG PF00684.19 gi|452211797|ref|YP_007491911.1| - 1.8e-05 25.0 4.2 0.028 14.8 0.4 3.9 3 0 0 3 3 3 1 DnaJ central domain RsgA_GTPase PF03193.16 gi|452211797|ref|YP_007491911.1| - 2.4e-05 24.3 0.1 0.19 11.6 0.0 2.4 2 0 0 2 2 2 2 RsgA GTPase Viral_helicase1 PF01443.18 gi|452211797|ref|YP_007491911.1| - 4.3e-05 23.4 0.1 0.087 12.6 0.0 2.7 2 0 0 2 2 2 2 Viral (Superfamily 1) RNA helicase AAA_25 PF13481.6 gi|452211797|ref|YP_007491911.1| - 4.8e-05 23.0 0.0 0.47 10.0 0.0 2.7 2 0 0 2 2 2 2 AAA domain cobW PF02492.19 gi|452211797|ref|YP_007491911.1| - 0.00012 21.7 0.3 0.064 12.8 0.1 2.4 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain DUF2075 PF09848.9 gi|452211797|ref|YP_007491911.1| - 0.00013 21.4 0.1 0.17 11.1 0.0 2.3 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) AAA_23 PF13476.6 gi|452211797|ref|YP_007491911.1| - 0.00016 22.3 9.8 0.025 15.1 0.1 3.6 4 0 0 4 4 3 2 AAA domain AAA_18 PF13238.6 gi|452211797|ref|YP_007491911.1| - 0.00017 22.2 0.2 0.36 11.4 0.1 3.1 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|452211797|ref|YP_007491911.1| - 0.00022 21.4 0.0 0.92 9.7 0.0 2.8 3 0 0 3 3 2 2 AAA domain T2SSE PF00437.20 gi|452211797|ref|YP_007491911.1| - 0.00045 19.4 0.2 0.9 8.5 0.0 2.4 2 0 0 2 2 2 2 Type II/IV secretion system protein ATPase PF06745.13 gi|452211797|ref|YP_007491911.1| - 0.00075 18.9 3.4 0.18 11.1 0.0 3.5 4 0 0 4 4 3 1 KaiC APS_kinase PF01583.20 gi|452211797|ref|YP_007491911.1| - 0.00087 19.2 0.2 1.1 9.1 0.0 2.6 2 0 0 2 2 2 2 Adenylylsulphate kinase NACHT PF05729.12 gi|452211797|ref|YP_007491911.1| - 0.0019 18.1 0.1 1 9.3 0.0 2.4 2 0 0 2 2 2 1 NACHT domain BCA_ABC_TP_C PF12399.8 gi|452211797|ref|YP_007491911.1| - 0.0019 18.1 5.4 0.2 11.6 0.2 2.8 2 0 0 2 2 2 2 Branched-chain amino acid ATP-binding cassette transporter RNA_helicase PF00910.22 gi|452211797|ref|YP_007491911.1| - 0.0025 18.2 0.2 0.73 10.2 0.0 2.9 3 0 0 3 3 2 1 RNA helicase AAA_24 PF13479.6 gi|452211797|ref|YP_007491911.1| - 0.0028 17.4 0.6 3.5 7.3 0.1 2.9 3 0 0 3 3 3 2 AAA domain ATPase_2 PF01637.18 gi|452211797|ref|YP_007491911.1| - 0.0039 17.1 0.0 1.5 8.7 0.0 2.7 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_30 PF13604.6 gi|452211797|ref|YP_007491911.1| - 0.012 15.3 0.6 8.4 6.1 0.2 2.9 3 0 0 3 3 3 0 AAA domain MeaB PF03308.16 gi|452211797|ref|YP_007491911.1| - 0.016 14.2 0.2 6.4 5.7 0.0 2.6 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB PRK PF00485.18 gi|452211797|ref|YP_007491911.1| - 0.022 14.5 0.2 7 6.3 0.0 2.9 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family AAA_15 PF13175.6 gi|452211797|ref|YP_007491911.1| - 0.032 13.9 11.2 8.7 5.9 0.0 4.8 4 2 0 5 5 4 0 AAA ATPase domain AAA_28 PF13521.6 gi|452211797|ref|YP_007491911.1| - 0.034 14.4 0.2 6.9 6.9 0.0 2.9 2 0 0 2 2 2 0 AAA domain DAP3 PF10236.9 gi|452211797|ref|YP_007491911.1| - 0.065 12.4 0.2 3.2 6.8 0.1 2.3 2 0 0 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 NTPase_1 PF03266.15 gi|452211797|ref|YP_007491911.1| - 0.13 12.2 3.5 10 6.0 0.1 3.0 3 0 0 3 3 2 0 NTPase AAA_7 PF12775.7 gi|452211797|ref|YP_007491911.1| - 0.13 11.8 0.1 9.6 5.7 0.1 2.9 3 0 0 3 3 3 0 P-loop containing dynein motor region MMR_HSR1 PF01926.23 gi|452211797|ref|YP_007491911.1| - 0.15 12.1 0.6 18 5.4 0.0 3.3 4 0 0 4 4 2 0 50S ribosome-binding GTPase Zn-ribbon_8 PF09723.10 gi|452211797|ref|YP_007491911.1| - 2.3 8.4 11.5 4.8 7.4 0.8 3.7 3 0 0 3 3 3 0 Zinc ribbon domain Lar_restr_allev PF14354.6 gi|452211797|ref|YP_007491911.1| - 5.2 7.5 7.8 18 5.8 0.2 3.4 3 0 0 3 3 3 0 Restriction alleviation protein Lar DrsE PF02635.15 gi|452211798|ref|YP_007491912.1| - 4.4e-09 36.7 0.0 5.5e-09 36.4 0.0 1.2 1 0 0 1 1 1 1 DsrE/DsrF-like family Fer4 PF00037.27 gi|452211800|ref|YP_007491914.1| - 4.2e-08 32.7 9.2 1.1e-05 25.0 0.4 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|452211800|ref|YP_007491914.1| - 1.4e-06 29.1 11.1 7.5e-06 26.8 11.1 2.0 1 1 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|452211800|ref|YP_007491914.1| - 4.6e-06 26.7 9.5 0.00042 20.4 11.6 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|452211800|ref|YP_007491914.1| - 8.6e-06 25.6 8.3 0.002 18.1 1.8 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|452211800|ref|YP_007491914.1| - 1.8e-05 25.2 7.9 3.4e-05 24.4 7.9 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452211800|ref|YP_007491914.1| - 0.00037 20.4 9.5 0.018 15.1 2.0 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|452211800|ref|YP_007491914.1| - 0.00079 19.5 10.6 0.0056 16.8 2.7 2.2 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|452211800|ref|YP_007491914.1| - 0.0023 18.3 8.5 0.035 14.6 9.2 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|452211800|ref|YP_007491914.1| - 0.0025 18.3 9.1 0.65 10.6 10.8 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|452211800|ref|YP_007491914.1| - 0.0032 18.3 13.1 0.065 14.2 5.4 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|452211800|ref|YP_007491914.1| - 0.0083 16.6 7.7 0.055 14.0 2.4 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Dehalogenase PF13486.6 gi|452211800|ref|YP_007491914.1| - 0.019 14.4 0.0 0.029 13.7 0.0 1.4 1 1 0 1 1 1 0 Reductive dehalogenase subunit Fer4_22 PF17179.4 gi|452211800|ref|YP_007491914.1| - 0.023 15.5 1.9 0.75 10.7 0.1 2.3 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|452211800|ref|YP_007491914.1| - 0.033 14.7 3.9 0.62 10.7 1.0 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_21 PF14697.6 gi|452211800|ref|YP_007491914.1| - 0.072 13.2 11.1 0.36 11.0 11.1 2.0 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|452211800|ref|YP_007491914.1| - 1.4 9.1 9.5 7.9 6.7 2.0 2.3 1 1 0 2 2 2 0 4Fe-4S dicluster domain DUF2061 PF09834.9 gi|452211801|ref|YP_007491915.1| - 0.16 12.5 0.7 0.16 12.5 0.7 3.3 3 1 0 3 3 3 0 Predicted membrane protein (DUF2061) Neurensin PF14927.6 gi|452211801|ref|YP_007491915.1| - 0.44 10.2 3.4 9.9 5.9 1.8 2.9 2 1 0 2 2 2 0 Neurensin Mrr_cat PF04471.12 gi|452211802|ref|YP_007491916.1| - 7.1e-31 106.6 0.0 7.8e-31 106.5 0.0 1.0 1 0 0 1 1 1 1 Restriction endonuclease Mrr_cat_2 PF13156.6 gi|452211802|ref|YP_007491916.1| - 1.2e-06 28.4 0.0 1.3e-06 28.3 0.0 1.0 1 0 0 1 1 1 1 Restriction endonuclease PAS_3 PF08447.12 gi|452211803|ref|YP_007491917.1| - 1.1e-41 141.0 0.5 2.5e-21 75.8 0.4 3.5 3 0 0 3 3 3 3 PAS fold HisKA_2 PF07568.12 gi|452211803|ref|YP_007491917.1| - 2.3e-31 107.7 2.8 2.3e-31 107.7 2.8 1.9 2 0 0 2 2 2 1 Histidine kinase PAS_9 PF13426.7 gi|452211803|ref|YP_007491917.1| - 1.3e-22 80.0 0.4 3.8e-08 33.5 0.0 3.6 3 0 0 3 3 3 3 PAS domain PAS PF00989.25 gi|452211803|ref|YP_007491917.1| - 2.6e-22 79.0 0.0 3.3e-06 27.1 0.0 4.4 4 0 0 4 4 4 3 PAS fold PAS_4 PF08448.10 gi|452211803|ref|YP_007491917.1| - 1.6e-18 66.9 0.0 5.7e-09 36.2 0.0 4.6 4 1 0 4 4 4 3 PAS fold GAF_3 PF13492.6 gi|452211803|ref|YP_007491917.1| - 6.2e-12 46.0 0.0 1.1e-11 45.1 0.0 1.5 1 0 0 1 1 1 1 GAF domain GAF_2 PF13185.6 gi|452211803|ref|YP_007491917.1| - 2.5e-08 34.3 0.0 4.4e-08 33.5 0.0 1.4 1 0 0 1 1 1 1 GAF domain GAF PF01590.26 gi|452211803|ref|YP_007491917.1| - 2.3e-07 31.5 0.0 4.4e-07 30.6 0.0 1.5 1 0 0 1 1 1 1 GAF domain HWE_HK PF07536.14 gi|452211803|ref|YP_007491917.1| - 0.00011 22.8 0.5 0.00022 21.8 0.5 1.5 1 0 0 1 1 1 1 HWE histidine kinase HATPase_c PF02518.26 gi|452211803|ref|YP_007491917.1| - 0.00046 20.7 0.0 0.0018 18.8 0.0 2.0 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.7 gi|452211803|ref|YP_007491917.1| - 0.061 13.4 0.0 13 6.0 0.0 3.5 3 0 0 3 3 3 0 PAS domain Rubredoxin PF00301.20 gi|452211805|ref|YP_007491919.1| - 3.7e-21 74.9 0.6 4e-21 74.8 0.6 1.0 1 0 0 1 1 1 1 Rubredoxin Rubredoxin_2 PF18073.1 gi|452211805|ref|YP_007491919.1| - 4.2e-05 23.2 4.8 0.02 14.6 0.4 2.2 2 0 0 2 2 2 2 Rubredoxin metal binding domain PHD_4 PF16866.5 gi|452211805|ref|YP_007491919.1| - 0.00066 19.7 0.7 0.00094 19.2 0.7 1.3 1 1 0 1 1 1 1 PHD-finger zf-C2H2_3 PF13878.6 gi|452211805|ref|YP_007491919.1| - 0.00092 19.0 0.9 0.076 12.8 0.2 2.2 2 0 0 2 2 2 1 zinc-finger of acetyl-transferase ESCO TF_Zn_Ribbon PF08271.12 gi|452211805|ref|YP_007491919.1| - 0.0015 18.0 0.5 0.76 9.3 0.0 2.2 2 0 0 2 2 2 2 TFIIB zinc-binding DUF35_N PF12172.8 gi|452211805|ref|YP_007491919.1| - 0.0021 17.9 1.0 1.4 8.9 0.1 2.1 2 0 0 2 2 2 2 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-HIT PF04438.16 gi|452211805|ref|YP_007491919.1| - 0.0027 17.5 4.3 0.56 10.1 0.0 2.1 2 0 0 2 2 2 2 HIT zinc finger TFIIS_C PF01096.18 gi|452211805|ref|YP_007491919.1| - 0.0074 16.1 1.8 0.86 9.5 0.1 2.1 2 0 0 2 2 2 1 Transcription factor S-II (TFIIS) zinc_ribbon_4 PF13717.6 gi|452211805|ref|YP_007491919.1| - 0.0079 16.1 0.1 2.5 8.1 0.0 2.2 2 0 0 2 2 2 1 zinc-ribbon domain zinc_ribbon_10 PF10058.9 gi|452211805|ref|YP_007491919.1| - 0.0091 15.7 1.7 2.9 7.7 0.0 2.1 2 0 0 2 2 2 2 Predicted integral membrane zinc-ribbon metal-binding protein OrfB_Zn_ribbon PF07282.11 gi|452211805|ref|YP_007491919.1| - 0.0094 15.9 1.7 2.1 8.4 0.1 2.1 1 1 0 1 1 1 1 Putative transposase DNA-binding domain Zn_Tnp_IS1595 PF12760.7 gi|452211805|ref|YP_007491919.1| - 0.013 15.5 1.8 0.82 9.7 0.1 2.1 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zf-Sec23_Sec24 PF04810.15 gi|452211805|ref|YP_007491919.1| - 0.015 15.4 2.0 1.9 8.6 0.0 2.1 2 0 0 2 2 2 0 Sec23/Sec24 zinc finger Zn_ribbon_SprT PF17283.2 gi|452211805|ref|YP_007491919.1| - 0.018 14.9 4.5 1 9.3 0.4 2.1 2 0 0 2 2 2 0 SprT-like zinc ribbon domain Zn-ribbon_8 PF09723.10 gi|452211805|ref|YP_007491919.1| - 0.019 15.0 4.2 0.17 12.0 4.1 2.1 1 1 0 1 1 1 0 Zinc ribbon domain zinc_ribbon_2 PF13240.6 gi|452211805|ref|YP_007491919.1| - 0.023 14.4 4.3 1.6 8.6 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-RanBP PF00641.18 gi|452211805|ref|YP_007491919.1| - 0.032 13.5 4.7 0.091 12.1 0.5 2.1 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others HalOD2 PF18547.1 gi|452211805|ref|YP_007491919.1| - 0.033 14.1 2.8 0.37 10.7 2.8 2.0 1 1 0 1 1 1 0 Halobacterial output domain 2 UPF0547 PF10571.9 gi|452211805|ref|YP_007491919.1| - 0.037 14.1 1.9 2.8 8.1 0.1 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-ribbon_3 PF13248.6 gi|452211805|ref|YP_007491919.1| - 0.051 13.0 4.5 1.1 8.8 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-tcix PF14952.6 gi|452211805|ref|YP_007491919.1| - 0.054 13.1 2.0 3.4 7.4 0.3 2.1 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding RbpA PF13397.6 gi|452211805|ref|YP_007491919.1| - 0.076 13.6 0.2 0.09 13.4 0.2 1.4 1 1 0 1 1 1 0 RNA polymerase-binding protein HypA PF01155.19 gi|452211805|ref|YP_007491919.1| - 0.09 12.8 0.1 0.11 12.5 0.1 1.2 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CpXC PF14353.6 gi|452211805|ref|YP_007491919.1| - 0.091 12.8 0.1 4.1 7.5 0.0 2.1 2 0 0 2 2 2 0 CpXC protein zf_UBZ PF18439.1 gi|452211805|ref|YP_007491919.1| - 0.093 12.3 1.5 1.7 8.3 0.1 2.2 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger Mu-like_Com PF10122.9 gi|452211805|ref|YP_007491919.1| - 0.13 11.7 3.7 2 7.9 3.7 2.1 1 1 0 1 1 1 0 Mu-like prophage protein Com zf-TFIIB PF13453.6 gi|452211805|ref|YP_007491919.1| - 0.14 11.5 2.4 0.93 8.9 0.2 2.2 2 0 0 2 2 2 0 Transcription factor zinc-finger zf-Mss51 PF13824.6 gi|452211805|ref|YP_007491919.1| - 0.19 11.8 3.5 1.6 8.9 0.2 2.1 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-H2C2_2 PF13465.6 gi|452211805|ref|YP_007491919.1| - 0.24 11.9 1.8 8 7.1 0.1 2.1 2 0 0 2 2 2 0 Zinc-finger double domain zn-ribbon_14 PF16503.5 gi|452211805|ref|YP_007491919.1| - 9.6 5.8 8.4 2.4 7.7 0.3 2.4 3 0 0 3 3 3 0 Zinc-ribbon ELFV_dehydrog PF00208.21 gi|452211806|ref|YP_007491920.1| - 2.5e-50 171.5 0.1 2.8e-50 171.3 0.1 1.0 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DUF3579 PF12112.8 gi|452211806|ref|YP_007491920.1| - 0.12 13.0 0.0 0.18 12.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3579) ELFV_dehydrog_N PF02812.18 gi|452211807|ref|YP_007491921.1| - 1.2e-47 161.1 0.0 1.7e-47 160.5 0.0 1.3 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FAD_binding_3 PF01494.19 gi|452211808|ref|YP_007491922.1| - 2.1e-14 53.5 6.8 4.4e-10 39.3 2.2 3.6 2 1 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.7 gi|452211808|ref|YP_007491922.1| - 2.3e-10 40.4 0.7 3.3e-10 39.9 0.7 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase Thi4 PF01946.17 gi|452211808|ref|YP_007491922.1| - 1e-07 31.5 0.0 1.9e-07 30.6 0.0 1.4 1 0 0 1 1 1 1 Thi4 family DAO PF01266.24 gi|452211808|ref|YP_007491922.1| - 6.2e-07 29.3 4.8 3.9e-05 23.4 1.0 2.4 1 1 0 2 2 2 2 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 gi|452211808|ref|YP_007491922.1| - 2e-06 27.1 0.3 0.0014 17.8 0.0 2.4 2 1 0 2 2 2 2 Lycopene cyclase protein NAD_binding_8 PF13450.6 gi|452211808|ref|YP_007491922.1| - 6.6e-06 26.3 0.1 1.7e-05 24.9 0.1 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 gi|452211808|ref|YP_007491922.1| - 8.6e-06 24.7 0.3 1.6e-05 23.8 0.3 1.4 1 0 0 1 1 1 1 HI0933-like protein Pyr_redox_2 PF07992.14 gi|452211808|ref|YP_007491922.1| - 0.00016 21.1 3.6 0.00016 21.1 3.6 2.5 2 2 1 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|452211808|ref|YP_007491922.1| - 0.00022 20.4 0.7 0.00037 19.7 0.7 1.3 1 0 0 1 1 1 1 Glucose inhibited division protein A Trp_halogenase PF04820.14 gi|452211808|ref|YP_007491922.1| - 0.00038 19.4 0.4 0.21 10.4 0.5 2.8 1 1 1 2 2 2 2 Tryptophan halogenase FAD_binding_2 PF00890.24 gi|452211808|ref|YP_007491922.1| - 0.0036 16.5 1.1 0.0064 15.6 1.1 1.4 1 0 0 1 1 1 1 FAD binding domain AlaDh_PNT_C PF01262.21 gi|452211808|ref|YP_007491922.1| - 0.022 14.0 2.9 0.063 12.6 0.4 2.2 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain 3HCDH_N PF02737.18 gi|452211808|ref|YP_007491922.1| - 0.12 12.3 0.3 0.22 11.4 0.3 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox_3 PF13738.6 gi|452211808|ref|YP_007491922.1| - 0.16 11.2 0.2 0.23 10.6 0.2 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|452211808|ref|YP_007491922.1| - 0.16 12.5 1.2 1 10.0 0.2 2.4 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase PKcGMP_CC PF16808.5 gi|452211809|ref|YP_007491923.1| - 0.019 14.8 0.4 0.91 9.4 0.0 2.5 2 0 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase AI-2E_transport PF01594.16 gi|452211810|ref|YP_007491924.1| - 3.5e-42 144.7 40.1 4.3e-42 144.4 40.1 1.0 1 0 0 1 1 1 1 AI-2E family transporter Rad33 PF08730.10 gi|452211810|ref|YP_007491924.1| - 0.24 11.4 0.0 0.39 10.7 0.0 1.2 1 0 0 1 1 1 0 Rad33 PetG PF02529.15 gi|452211810|ref|YP_007491924.1| - 0.53 10.2 7.6 0.87 9.5 0.4 3.2 3 0 0 3 3 3 0 Cytochrome B6-F complex subunit 5 tRNA-Thr_ED PF08915.11 gi|452211811|ref|YP_007491925.1| - 2.5e-53 179.8 0.5 5.1e-53 178.8 0.5 1.5 1 0 0 1 1 1 1 Archaea-specific editing domain of threonyl-tRNA synthetase HGTP_anticodon PF03129.20 gi|452211811|ref|YP_007491925.1| - 1.2e-17 63.8 1.7 1.2e-17 63.8 1.7 2.1 2 0 0 2 2 2 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|452211811|ref|YP_007491925.1| - 2.1e-15 57.2 0.3 3.6e-15 56.4 0.3 1.4 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Heme_oxygenase PF01126.20 gi|452211811|ref|YP_007491925.1| - 0.023 14.5 0.1 0.054 13.3 0.1 1.6 1 0 0 1 1 1 0 Heme oxygenase PTPlike_phytase PF14566.6 gi|452211811|ref|YP_007491925.1| - 0.18 11.9 5.9 5.3 7.1 0.0 3.9 3 1 1 4 4 4 0 Inositol hexakisphosphate Helicase_C PF00271.31 gi|452211813|ref|YP_007491927.1| - 2.5e-07 31.0 0.0 5.3e-06 26.7 0.0 2.8 2 1 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|452211813|ref|YP_007491927.1| - 0.0039 17.2 0.0 0.0076 16.3 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DUF3995 PF13160.6 gi|452211814|ref|YP_007491928.1| - 0.034 14.5 0.2 0.061 13.7 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3995) Zn_protease PF05618.11 gi|452211815|ref|YP_007491929.1| - 7.5e-13 48.5 0.0 3.3e-12 46.5 0.0 1.8 1 1 0 1 1 1 1 Putative ATP-dependant zinc protease Pep_deformylase PF01327.21 gi|452211815|ref|YP_007491929.1| - 0.0038 16.9 0.1 0.22 11.1 0.1 2.1 1 1 0 1 1 1 1 Polypeptide deformylase Hydrolase_4 PF12146.8 gi|452211816|ref|YP_007491930.1| - 1.5e-07 31.0 0.0 0.0039 16.5 0.0 2.2 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 gi|452211816|ref|YP_007491930.1| - 5.2e-05 23.9 0.0 0.00026 21.7 0.0 1.9 1 1 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|452211816|ref|YP_007491930.1| - 0.0051 16.5 0.1 0.097 12.3 0.0 2.1 1 1 1 2 2 2 1 alpha/beta hydrolase fold FSH1 PF03959.13 gi|452211816|ref|YP_007491930.1| - 0.0074 16.0 0.0 0.01 15.5 0.0 1.3 1 0 0 1 1 1 1 Serine hydrolase (FSH1) Abhydrolase_7 PF12715.7 gi|452211816|ref|YP_007491930.1| - 0.028 13.7 0.0 0.038 13.2 0.0 1.3 1 0 0 1 1 1 0 Abhydrolase family Nitroreductase PF00881.24 gi|452211817|ref|YP_007491931.1| - 8.8e-25 87.7 0.0 1.6e-24 86.9 0.0 1.4 2 0 0 2 2 1 1 Nitroreductase family Fer4 PF00037.27 gi|452211817|ref|YP_007491931.1| - 1.8e-11 43.3 12.3 2.4e-07 30.3 4.1 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|452211817|ref|YP_007491931.1| - 2.5e-09 37.6 9.6 5e-09 36.6 9.6 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452211817|ref|YP_007491931.1| - 2.2e-08 34.1 7.5 4.3e-08 33.2 7.5 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|452211817|ref|YP_007491931.1| - 5.9e-08 32.3 11.0 1.4e-05 24.9 2.3 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|452211817|ref|YP_007491931.1| - 6.3e-08 32.6 10.6 8.8e-08 32.2 10.0 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|452211817|ref|YP_007491931.1| - 6.2e-07 30.3 8.3 0.0024 18.7 1.5 2.4 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 gi|452211817|ref|YP_007491931.1| - 9.3e-07 28.7 15.3 9.3e-06 25.5 3.1 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain TM1586_NiRdase PF14512.6 gi|452211817|ref|YP_007491931.1| - 1.3e-05 24.9 0.0 0.19 11.3 0.0 2.7 2 1 1 3 3 3 2 Putative TM nitroreductase Fer4_17 PF13534.6 gi|452211817|ref|YP_007491931.1| - 6.8e-05 23.3 11.3 0.0031 18.0 11.3 2.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|452211817|ref|YP_007491931.1| - 0.00029 21.1 12.8 0.014 15.8 1.9 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|452211817|ref|YP_007491931.1| - 0.0032 17.6 13.0 0.006 16.7 12.2 1.9 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|452211817|ref|YP_007491931.1| - 0.007 16.8 14.6 0.34 11.4 13.8 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|452211817|ref|YP_007491931.1| - 0.0097 16.4 11.6 0.013 16.0 2.4 2.5 2 0 0 2 2 2 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|452211817|ref|YP_007491931.1| - 0.016 16.0 0.4 0.016 16.0 0.4 2.4 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|452211817|ref|YP_007491931.1| - 0.11 13.4 8.0 3.5 8.5 0.8 2.2 2 0 0 2 2 2 0 4Fe-4S dicluster domain Clathrin_bdg PF15045.6 gi|452211817|ref|YP_007491931.1| - 0.22 11.5 0.0 0.38 10.8 0.0 1.3 1 0 0 1 1 1 0 Clathrin-binding box of Aftiphilin, vesicle trafficking Fer4_3 PF12798.7 gi|452211817|ref|YP_007491931.1| - 0.24 12.4 20.7 0.12 13.3 5.0 2.7 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|452211817|ref|YP_007491931.1| - 0.71 10.1 11.2 32 4.7 11.5 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain DJ-1_PfpI PF01965.24 gi|452211818|ref|YP_007491932.1| - 3.6e-29 101.7 0.0 4.7e-29 101.3 0.0 1.1 1 0 0 1 1 1 1 DJ-1/PfpI family DUF3248 PF11609.8 gi|452211818|ref|YP_007491932.1| - 0.032 14.1 0.0 0.054 13.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3248) Monooxygenase_B PF04744.12 gi|452211818|ref|YP_007491932.1| - 0.14 10.9 0.0 0.21 10.4 0.0 1.1 1 0 0 1 1 1 0 Monooxygenase subunit B protein UL40 PF10682.9 gi|452211818|ref|YP_007491932.1| - 0.18 11.5 0.0 0.24 11.1 0.0 1.1 1 0 0 1 1 1 0 Glycoprotein of human cytomegalovirus HHV-5 Acetyltransf_1 PF00583.25 gi|452211820|ref|YP_007491934.1| - 2.2e-09 37.6 0.0 3.5e-09 36.9 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_9 PF13527.7 gi|452211820|ref|YP_007491934.1| - 1e-08 35.3 0.0 1.6e-08 34.7 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|452211820|ref|YP_007491934.1| - 1e-07 32.3 0.0 1.6e-07 31.7 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|452211820|ref|YP_007491934.1| - 3.2e-05 23.9 0.2 6.7e-05 22.8 0.0 1.7 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|452211820|ref|YP_007491934.1| - 0.033 14.3 0.0 0.059 13.5 0.0 1.4 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase HNH PF01844.23 gi|452211821|ref|YP_007491935.1| - 1.5e-10 41.0 1.4 2.9e-10 40.1 1.4 1.5 1 0 0 1 1 1 1 HNH endonuclease ZF-HD_dimer PF04770.12 gi|452211821|ref|YP_007491935.1| - 0.025 14.9 1.0 0.06 13.7 0.1 1.9 2 0 0 2 2 2 0 ZF-HD protein dimerisation region HNH_2 PF13391.6 gi|452211821|ref|YP_007491935.1| - 0.086 13.0 0.1 0.26 11.5 0.1 1.7 1 1 0 1 1 1 0 HNH endonuclease AzlD PF05437.12 gi|452211822|ref|YP_007491936.1| - 0.0012 19.0 6.9 0.0022 18.1 6.9 1.5 1 0 0 1 1 1 1 Branched-chain amino acid transport protein (AzlD) 7TMR-DISM_7TM PF07695.11 gi|452211822|ref|YP_007491936.1| - 0.08 12.8 11.8 0.1 12.5 11.8 1.1 1 0 0 1 1 1 0 7TM diverse intracellular signalling DUF4191 PF13829.6 gi|452211822|ref|YP_007491936.1| - 0.14 11.5 4.8 0.16 11.3 4.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4191) DUF2919 PF11143.8 gi|452211822|ref|YP_007491936.1| - 1.2 9.5 13.6 2.3 8.5 13.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2919) DUF1129 PF06570.11 gi|452211822|ref|YP_007491936.1| - 3.1 7.2 9.2 1 8.8 6.4 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1129) DUF2892 PF11127.8 gi|452211822|ref|YP_007491936.1| - 8.6 6.5 10.3 2.9 8.0 6.5 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF2892) PRAI PF00697.22 gi|452211823|ref|YP_007491937.1| - 5.6e-28 98.0 0.1 6.9e-28 97.7 0.1 1.1 1 0 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ER PF01133.17 gi|452211825|ref|YP_007491939.1| - 0.014 15.4 0.4 0.016 15.2 0.4 1.1 1 0 0 1 1 1 0 Enhancer of rudimentary NUDIX PF00293.28 gi|452211827|ref|YP_007491941.1| - 5.5e-13 49.1 0.1 8.1e-13 48.6 0.1 1.2 1 0 0 1 1 1 1 NUDIX domain NosD PF05048.13 gi|452211828|ref|YP_007491942.1| - 7.3e-104 346.3 120.1 1.6e-37 129.1 17.4 6.5 1 1 5 6 6 6 6 Periplasmic copper-binding protein (NosD) Beta_helix PF13229.6 gi|452211828|ref|YP_007491942.1| - 1.6e-97 323.8 206.6 9e-29 100.4 18.3 8.5 3 2 6 9 9 9 8 Right handed beta helix region PGF-CTERM PF18204.1 gi|452211828|ref|YP_007491942.1| - 6.6e-07 29.1 0.3 6.6e-07 29.1 0.3 1.9 2 0 0 2 2 2 1 PGF-CTERM motif Pectate_lyase_3 PF12708.7 gi|452211828|ref|YP_007491942.1| - 0.00064 19.6 71.1 0.41 10.4 11.6 7.4 3 3 3 7 7 7 5 Pectate lyase superfamily protein DUF3715 PF12509.8 gi|452211828|ref|YP_007491942.1| - 0.01 15.8 3.1 1.8 8.5 0.4 3.3 3 1 0 3 3 3 0 Protein of unknown function (DUF3715) TGBp3 PF02495.17 gi|452211828|ref|YP_007491942.1| - 0.16 11.6 0.9 0.97 9.1 1.0 2.3 2 0 0 2 2 2 0 Triple gene block 3 MFS_1 PF07690.16 gi|452211830|ref|YP_007491944.1| - 1.4e-22 80.1 42.6 6.2e-21 74.7 37.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|452211830|ref|YP_007491944.1| - 1.6e-07 30.6 37.6 0.00012 21.0 15.7 2.6 1 1 2 3 3 3 2 MFS_1 like family BPD_transp_1 PF00528.22 gi|452211831|ref|YP_007491945.1| - 1.1e-33 116.5 4.3 1.1e-33 116.5 4.3 1.8 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|452211831|ref|YP_007491945.1| - 4.8e-07 29.7 0.1 4.8e-07 29.7 0.1 2.5 3 0 0 3 3 3 1 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.22 gi|452211832|ref|YP_007491946.1| - 5.5e-49 166.4 10.4 5.5e-49 166.4 10.4 1.6 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component Renin_r PF07850.14 gi|452211832|ref|YP_007491946.1| - 3.6 8.2 9.9 0.69 10.5 0.7 3.2 3 0 0 3 3 3 0 Renin receptor-like protein SBP_bac_5 PF00496.22 gi|452211833|ref|YP_007491947.1| - 1.9e-82 277.2 4.4 2.4e-82 276.9 4.4 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle ABC_tran PF00005.27 gi|452211834|ref|YP_007491948.1| - 1.5e-31 109.8 0.0 3.6e-31 108.5 0.0 1.6 2 0 0 2 2 2 1 ABC transporter SMC_N PF02463.19 gi|452211834|ref|YP_007491948.1| - 1.1e-07 31.5 0.0 2.2e-07 30.5 0.0 1.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain oligo_HPY PF08352.12 gi|452211834|ref|YP_007491948.1| - 2e-07 31.4 2.9 5.5e-06 26.8 2.9 2.4 1 1 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|452211834|ref|YP_007491948.1| - 3.6e-06 27.0 1.2 0.025 14.4 0.1 2.6 2 1 1 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|452211834|ref|YP_007491948.1| - 0.00014 22.2 0.3 0.0016 18.7 0.3 2.2 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|452211834|ref|YP_007491948.1| - 0.00029 20.5 0.0 0.00068 19.3 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|452211834|ref|YP_007491948.1| - 0.0015 18.9 0.1 0.0031 17.9 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain DUF3987 PF13148.6 gi|452211834|ref|YP_007491948.1| - 0.041 12.9 0.0 0.069 12.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) ATP-synt_ab PF00006.25 gi|452211834|ref|YP_007491948.1| - 0.059 13.0 0.0 0.064 12.9 0.0 1.1 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain ATPase PF06745.13 gi|452211834|ref|YP_007491948.1| - 0.07 12.5 0.4 0.21 10.9 0.1 1.8 2 0 0 2 2 2 0 KaiC RsgA_GTPase PF03193.16 gi|452211834|ref|YP_007491948.1| - 0.091 12.7 0.1 0.2 11.6 0.1 1.5 1 0 0 1 1 1 0 RsgA GTPase ABC_tran PF00005.27 gi|452211835|ref|YP_007491949.1| - 1e-24 87.6 0.0 1.4e-24 87.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|452211835|ref|YP_007491949.1| - 1.4e-12 47.9 0.2 2.6e-12 47.1 0.2 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|452211835|ref|YP_007491949.1| - 5.1e-05 23.2 0.1 0.0094 15.8 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|452211835|ref|YP_007491949.1| - 0.00055 19.4 0.1 0.0013 18.2 0.1 1.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain DUF4921 PF16268.5 gi|452211835|ref|YP_007491949.1| - 0.036 12.9 0.0 0.054 12.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4921) NACHT PF05729.12 gi|452211835|ref|YP_007491949.1| - 0.2 11.6 0.0 0.36 10.7 0.0 1.4 1 0 0 1 1 1 0 NACHT domain AAA_16 PF13191.6 gi|452211835|ref|YP_007491949.1| - 0.21 11.9 0.0 0.34 11.3 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain SDF PF00375.18 gi|452211837|ref|YP_007491951.1| - 2.1e-115 385.8 44.0 2.5e-115 385.6 44.0 1.0 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family DUF565 PF04483.12 gi|452211837|ref|YP_007491951.1| - 0.02 15.4 0.1 0.074 13.6 0.1 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF565) Insulin_TMD PF17870.1 gi|452211837|ref|YP_007491951.1| - 10 6.3 9.6 12 6.1 0.9 3.4 3 0 0 3 3 3 0 Insulin receptor trans-membrane segment AFOR_C PF01314.18 gi|452211838|ref|YP_007491952.1| - 1.5e-65 221.7 0.1 1.9e-65 221.4 0.1 1.1 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AFOR_N PF02730.15 gi|452211838|ref|YP_007491952.1| - 4.8e-57 193.0 0.0 8.4e-57 192.2 0.0 1.4 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain Fer4 PF00037.27 gi|452211839|ref|YP_007491953.1| - 6.5e-13 47.9 33.6 0.00013 21.6 2.9 5.1 5 0 0 5 5 5 4 4Fe-4S binding domain Fer4_7 PF12838.7 gi|452211839|ref|YP_007491953.1| - 4.9e-12 46.3 23.1 0.0014 19.2 9.1 3.3 2 1 2 4 4 4 4 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|452211839|ref|YP_007491953.1| - 1.5e-10 41.1 48.7 1.8e-05 24.8 13.2 3.1 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|452211839|ref|YP_007491953.1| - 1.5e-10 41.0 30.3 0.0014 18.7 1.1 3.6 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|452211839|ref|YP_007491953.1| - 1.6e-10 40.6 34.8 0.00023 21.1 3.2 4.3 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_16 PF13484.6 gi|452211839|ref|YP_007491953.1| - 5.9e-09 36.7 25.0 0.0025 18.7 0.5 4.4 1 1 4 5 5 5 3 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|452211839|ref|YP_007491953.1| - 8e-09 35.1 35.7 0.00073 19.5 1.2 4.7 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_21 PF14697.6 gi|452211839|ref|YP_007491953.1| - 1e-08 35.1 26.9 0.0002 21.4 8.8 3.1 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|452211839|ref|YP_007491953.1| - 9.7e-07 28.8 28.2 0.0014 19.0 0.5 4.8 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_11 PF13247.6 gi|452211839|ref|YP_007491953.1| - 1.8e-05 24.8 10.8 1.8e-05 24.8 10.8 2.6 2 1 1 3 3 3 1 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|452211839|ref|YP_007491953.1| - 0.00011 22.9 43.5 0.033 15.1 5.9 4.4 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_17 PF13534.6 gi|452211839|ref|YP_007491953.1| - 0.00044 20.7 28.6 0.12 12.9 1.3 3.9 2 2 3 5 5 5 3 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|452211839|ref|YP_007491953.1| - 0.013 15.9 29.8 0.72 10.3 7.9 3.9 2 2 2 4 4 4 0 4Fe-4S dicluster domain ETF_QO PF05187.13 gi|452211839|ref|YP_007491953.1| - 0.61 10.3 0.1 0.61 10.3 0.1 3.0 1 1 2 3 3 3 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_13 PF13370.6 gi|452211839|ref|YP_007491953.1| - 1.7 9.3 23.8 0.47 11.0 2.8 3.6 4 0 0 4 4 4 0 4Fe-4S single cluster domain of Ferredoxin I GATase PF00117.28 gi|452211841|ref|YP_007491955.1| - 9.9e-15 54.8 0.0 2.1e-14 53.7 0.0 1.5 1 1 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.14 gi|452211841|ref|YP_007491955.1| - 0.00026 20.6 0.0 0.00037 20.1 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain Peptidase_C26 PF07722.13 gi|452211841|ref|YP_007491955.1| - 0.015 15.1 0.0 0.034 13.9 0.0 1.7 2 0 0 2 2 2 0 Peptidase C26 HAD_2 PF13419.6 gi|452211842|ref|YP_007491956.1| - 1.1e-38 133.2 0.0 1.3e-38 132.9 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|452211842|ref|YP_007491956.1| - 8.2e-15 55.6 0.1 5.2e-14 53.0 0.1 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|452211842|ref|YP_007491956.1| - 9.7e-08 32.0 0.0 1.8e-07 31.1 0.0 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 gi|452211842|ref|YP_007491956.1| - 0.00012 22.6 0.0 0.0002 21.8 0.0 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase DUF1828 PF08861.10 gi|452211842|ref|YP_007491956.1| - 0.097 13.0 0.1 0.18 12.1 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function DUF1828 TPR_2 PF07719.17 gi|452211843|ref|YP_007491957.1| - 1.1e-44 147.0 10.5 2.1e-09 36.8 0.1 6.3 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_1 PF00515.28 gi|452211843|ref|YP_007491957.1| - 5.1e-42 140.0 12.6 3.7e-10 39.2 0.1 6.3 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_8 PF13181.6 gi|452211843|ref|YP_007491957.1| - 2e-30 102.4 6.8 1.1e-05 25.3 0.1 6.5 6 0 0 6 6 6 5 Tetratricopeptide repeat TPR_16 PF13432.6 gi|452211843|ref|YP_007491957.1| - 2.4e-30 104.9 3.1 5.2e-11 43.0 0.0 4.9 3 1 2 5 5 5 5 Tetratricopeptide repeat TPR_11 PF13414.6 gi|452211843|ref|YP_007491957.1| - 1e-29 101.9 11.4 1e-09 37.9 0.1 6.3 3 1 3 6 6 6 6 TPR repeat TPR_17 PF13431.6 gi|452211843|ref|YP_007491957.1| - 3.5e-28 95.9 4.9 1.4e-06 28.2 0.0 6.7 7 0 0 7 7 7 3 Tetratricopeptide repeat TPR_12 PF13424.6 gi|452211843|ref|YP_007491957.1| - 2.2e-26 92.0 9.5 1.5e-09 38.0 0.3 5.5 2 2 4 6 6 6 6 Tetratricopeptide repeat TPR_14 PF13428.6 gi|452211843|ref|YP_007491957.1| - 1.3e-25 87.8 1.5 0.00011 22.7 0.1 6.2 3 1 3 6 6 6 5 Tetratricopeptide repeat TPR_9 PF13371.6 gi|452211843|ref|YP_007491957.1| - 1.9e-24 85.6 0.0 6.9e-06 26.1 0.0 5.2 3 1 1 5 5 5 4 Tetratricopeptide repeat TPR_19 PF14559.6 gi|452211843|ref|YP_007491957.1| - 1.5e-23 83.1 0.7 3.3e-09 37.1 0.0 4.2 4 0 0 4 4 4 3 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|452211843|ref|YP_007491957.1| - 1.3e-21 76.6 0.9 2.3e-08 34.1 0.0 5.2 3 1 3 6 6 6 6 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 gi|452211843|ref|YP_007491957.1| - 2.6e-15 56.0 3.9 0.086 13.5 0.0 6.3 6 0 0 6 6 6 3 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|452211843|ref|YP_007491957.1| - 1.2e-12 47.6 8.3 0.015 15.4 0.0 6.0 5 1 1 6 6 6 3 Fis1 C-terminal tetratricopeptide repeat TPR_10 PF13374.6 gi|452211843|ref|YP_007491957.1| - 7.4e-12 44.7 4.9 0.29 11.1 0.2 6.3 6 0 0 6 6 6 3 Tetratricopeptide repeat SRP_TPR_like PF17004.5 gi|452211843|ref|YP_007491957.1| - 1.8e-10 40.9 0.9 7.3e-05 22.8 0.4 4.2 1 1 2 3 3 3 2 Putative TPR-like repeat NARP1 PF12569.8 gi|452211843|ref|YP_007491957.1| - 2.1e-10 40.2 0.5 0.0015 17.5 0.0 3.6 2 1 1 4 4 4 3 NMDA receptor-regulated protein 1 TPR_7 PF13176.6 gi|452211843|ref|YP_007491957.1| - 3.8e-10 39.1 4.3 0.14 12.2 0.0 6.0 4 1 2 6 6 6 2 Tetratricopeptide repeat DUF3856 PF12968.7 gi|452211843|ref|YP_007491957.1| - 1.1e-07 32.0 2.7 1.4 9.0 0.1 5.8 3 1 2 6 6 6 2 Domain of Unknown Function (DUF3856) ANAPC5 PF12862.7 gi|452211843|ref|YP_007491957.1| - 4.1e-07 30.0 1.2 0.26 11.4 0.0 4.8 2 2 4 6 6 6 2 Anaphase-promoting complex subunit 5 TPR_3 PF07720.12 gi|452211843|ref|YP_007491957.1| - 5.6e-07 29.4 4.7 0.21 11.6 0.0 5.6 6 0 0 6 6 5 2 Tetratricopeptide repeat TPR_21 PF09976.9 gi|452211843|ref|YP_007491957.1| - 1.4e-06 28.2 0.4 1.3 8.7 0.0 3.7 2 1 1 3 3 3 3 Tetratricopeptide repeat-like domain TPR_15 PF13429.6 gi|452211843|ref|YP_007491957.1| - 2.6e-06 26.9 0.4 0.00027 20.3 0.0 3.3 1 1 3 4 4 4 1 Tetratricopeptide repeat TPR_20 PF14561.6 gi|452211843|ref|YP_007491957.1| - 5.1e-06 26.7 0.7 0.12 12.7 0.0 4.0 3 1 2 5 5 5 2 Tetratricopeptide repeat BTAD PF03704.17 gi|452211843|ref|YP_007491957.1| - 1.2e-05 25.8 0.7 0.0055 17.1 0.0 3.7 2 2 2 4 4 4 2 Bacterial transcriptional activator domain Coatomer_E PF04733.14 gi|452211843|ref|YP_007491957.1| - 5.8e-05 22.7 1.0 0.54 9.6 0.0 4.0 3 1 0 4 4 4 1 Coatomer epsilon subunit PPR PF01535.20 gi|452211843|ref|YP_007491957.1| - 0.00012 22.1 2.9 4.2 7.8 0.0 5.3 5 0 0 5 5 5 1 PPR repeat SHNi-TPR PF10516.9 gi|452211843|ref|YP_007491957.1| - 0.00021 20.7 1.7 0.71 9.4 0.0 4.0 4 0 0 4 4 4 1 SHNi-TPR DUF5113 PF17140.4 gi|452211843|ref|YP_007491957.1| - 0.00025 20.9 1.2 17 5.2 0.0 5.4 3 2 3 6 6 6 0 Domain of unknown function (DUF5113) TPR_4 PF07721.14 gi|452211843|ref|YP_007491957.1| - 0.00098 19.5 0.0 37 5.4 0.0 4.4 5 0 0 5 5 4 0 Tetratricopeptide repeat MIT PF04212.18 gi|452211843|ref|YP_007491957.1| - 0.0014 18.7 4.4 18 5.5 0.1 5.2 6 0 0 6 6 5 0 MIT (microtubule interacting and transport) domain ChAPs PF09295.10 gi|452211843|ref|YP_007491957.1| - 0.002 17.2 0.0 0.0036 16.4 0.0 1.3 1 0 0 1 1 1 1 ChAPs (Chs5p-Arf1p-binding proteins) TPR_5 PF12688.7 gi|452211843|ref|YP_007491957.1| - 0.0032 17.7 0.0 0.38 11.0 0.0 3.2 2 2 1 3 3 3 1 Tetratrico peptide repeat Wzy_C_2 PF11846.8 gi|452211843|ref|YP_007491957.1| - 0.034 14.1 0.1 4.1 7.3 0.0 2.8 2 1 1 3 3 3 0 Virulence factor membrane-bound polymerase, C-terminal Paf67 PF10255.9 gi|452211843|ref|YP_007491957.1| - 0.05 12.6 0.0 2.9 6.8 0.0 2.8 3 1 0 3 3 3 0 RNA polymerase I-associated factor PAF67 Alkyl_sulf_dimr PF14863.6 gi|452211843|ref|YP_007491957.1| - 0.11 12.9 0.3 8 6.9 0.0 3.2 3 0 0 3 3 3 0 Alkyl sulfatase dimerisation PPR_1 PF12854.7 gi|452211843|ref|YP_007491957.1| - 1.3 8.8 3.0 4.4 7.1 0.0 3.1 4 0 0 4 4 4 0 PPR repeat NAD_binding_8 PF13450.6 gi|452211844|ref|YP_007491958.1| - 7e-19 67.8 0.1 1.5e-18 66.7 0.1 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Amino_oxidase PF01593.24 gi|452211844|ref|YP_007491958.1| - 9.5e-17 61.4 0.0 1.9e-16 60.4 0.0 1.5 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase FAD_binding_2 PF00890.24 gi|452211844|ref|YP_007491958.1| - 4.5e-11 42.5 0.3 1.9e-09 37.1 0.6 2.5 3 0 0 3 3 3 1 FAD binding domain DAO PF01266.24 gi|452211844|ref|YP_007491958.1| - 2.5e-10 40.5 0.1 6.3e-07 29.3 0.2 2.7 3 0 0 3 3 3 2 FAD dependent oxidoreductase FAD_oxidored PF12831.7 gi|452211844|ref|YP_007491958.1| - 2.9e-09 36.8 0.1 4.5e-09 36.2 0.1 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|452211844|ref|YP_007491958.1| - 1e-07 31.0 0.6 4e-07 29.1 0.2 2.2 2 1 1 3 3 3 1 HI0933-like protein FAD_binding_3 PF01494.19 gi|452211844|ref|YP_007491958.1| - 3.9e-06 26.4 0.3 7.1e-06 25.5 0.3 1.4 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 gi|452211844|ref|YP_007491958.1| - 7.2e-06 25.4 0.0 1.7e-05 24.2 0.0 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|452211844|ref|YP_007491958.1| - 1e-05 24.9 0.6 2.4e-05 23.7 0.3 1.7 2 0 0 2 2 2 1 Thi4 family GDI PF00996.18 gi|452211844|ref|YP_007491958.1| - 3.7e-05 22.4 0.6 8.2e-05 21.3 0.6 1.6 1 0 0 1 1 1 1 GDP dissociation inhibitor Pyr_redox_3 PF13738.6 gi|452211844|ref|YP_007491958.1| - 0.00014 21.3 0.2 0.0016 17.7 0.1 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|452211844|ref|YP_007491958.1| - 0.00021 20.5 0.5 0.00059 19.0 0.5 1.7 1 0 0 1 1 1 1 Glucose inhibited division protein A Pyr_redox PF00070.27 gi|452211844|ref|YP_007491958.1| - 0.00025 21.5 2.1 0.00026 21.5 0.3 2.0 2 0 0 2 2 1 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 gi|452211844|ref|YP_007491958.1| - 0.0016 17.5 0.0 0.0023 17.0 0.0 1.2 1 0 0 1 1 1 1 Lycopene cyclase protein AlaDh_PNT_C PF01262.21 gi|452211844|ref|YP_007491958.1| - 0.014 14.7 0.0 0.024 13.9 0.0 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Trp_halogenase PF04820.14 gi|452211844|ref|YP_007491958.1| - 0.23 10.3 0.2 0.37 9.6 0.2 1.3 1 0 0 1 1 1 0 Tryptophan halogenase Rieske PF00355.26 gi|452211845|ref|YP_007491959.1| - 2.3e-17 62.7 0.0 2.9e-17 62.4 0.0 1.1 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 gi|452211845|ref|YP_007491959.1| - 7.3e-09 35.5 0.0 8.7e-09 35.3 0.0 1.1 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain B12-binding_2 PF02607.17 gi|452211847|ref|YP_007491961.1| - 2.5e-21 75.9 0.2 6e-21 74.7 0.0 1.8 2 0 0 2 2 2 1 B12 binding domain B12-binding PF02310.19 gi|452211847|ref|YP_007491961.1| - 4.4e-15 55.8 0.2 8.2e-15 54.9 0.2 1.4 1 0 0 1 1 1 1 B12 binding domain RsbU_N PF08673.10 gi|452211847|ref|YP_007491961.1| - 0.045 13.9 0.0 0.16 12.1 0.0 2.0 2 0 0 2 2 2 0 Phosphoserine phosphatase RsbU, N-terminal domain Blt1 PF12754.7 gi|452211847|ref|YP_007491961.1| - 0.1 12.9 0.1 0.14 12.4 0.1 1.2 1 0 0 1 1 1 0 Blt1 N-terminal domain MtmB PF05369.12 gi|452211848|ref|YP_007491962.1| - 5.2e-89 299.1 0.0 5.8e-89 298.9 0.0 1.0 1 0 0 1 1 1 1 Monomethylamine methyltransferase MtmB DUF2769 PF10967.8 gi|452211849|ref|YP_007491963.1| - 5e-14 52.7 8.5 8.1e-14 52.0 8.5 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2769) zf-C4_ClpX PF06689.13 gi|452211849|ref|YP_007491963.1| - 1.4 8.9 10.3 1.9 8.4 3.1 2.5 2 0 0 2 2 2 0 ClpX C4-type zinc finger SPT_ssu-like PF11779.8 gi|452211851|ref|YP_007491965.1| - 0.029 14.0 0.1 0.058 13.0 0.1 1.4 1 0 0 1 1 1 0 Small subunit of serine palmitoyltransferase-like TPR_1 PF00515.28 gi|452211856|ref|YP_007491970.1| - 5.7e-48 158.9 14.7 7e-08 32.0 0.2 8.3 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_2 PF07719.17 gi|452211856|ref|YP_007491970.1| - 8e-42 138.0 16.5 4.3e-07 29.5 0.3 8.3 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_11 PF13414.6 gi|452211856|ref|YP_007491970.1| - 6e-38 128.3 18.0 1e-08 34.7 0.6 8.1 4 3 4 8 8 8 7 TPR repeat TPR_17 PF13431.6 gi|452211856|ref|YP_007491970.1| - 3.6e-34 114.7 9.3 0.00034 20.8 0.1 8.3 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_16 PF13432.6 gi|452211856|ref|YP_007491970.1| - 4.7e-31 107.2 12.0 3.7e-10 40.3 0.8 5.7 2 2 5 7 7 7 7 Tetratricopeptide repeat TPR_8 PF13181.6 gi|452211856|ref|YP_007491970.1| - 8.1e-31 103.6 13.4 2.6e-08 33.4 0.2 7.7 8 0 0 8 8 7 6 Tetratricopeptide repeat TPR_14 PF13428.6 gi|452211856|ref|YP_007491970.1| - 2.8e-28 96.2 14.3 3.3e-06 27.4 0.7 8.2 1 1 7 8 8 8 7 Tetratricopeptide repeat TPR_9 PF13371.6 gi|452211856|ref|YP_007491970.1| - 8.5e-24 83.5 5.2 2.7e-07 30.7 0.3 5.2 1 1 5 6 6 6 6 Tetratricopeptide repeat TPR_19 PF14559.6 gi|452211856|ref|YP_007491970.1| - 6.8e-21 74.6 11.6 3.1e-06 27.6 0.1 5.5 2 2 3 6 6 6 6 Tetratricopeptide repeat TPR_12 PF13424.6 gi|452211856|ref|YP_007491970.1| - 1.2e-20 73.6 9.0 8.3e-05 22.8 2.5 5.7 2 1 5 7 7 7 6 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|452211856|ref|YP_007491970.1| - 3.5e-17 62.4 5.3 8.6e-06 25.9 0.0 3.5 2 1 1 3 3 3 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.6 gi|452211856|ref|YP_007491970.1| - 1.1e-11 43.8 4.7 0.0024 17.8 0.1 6.3 7 0 0 7 7 6 1 Tetratricopeptide repeat BTAD PF03704.17 gi|452211856|ref|YP_007491970.1| - 4.6e-09 36.8 3.7 0.029 14.8 0.1 3.5 2 1 1 3 3 3 2 Bacterial transcriptional activator domain TPR_15 PF13429.6 gi|452211856|ref|YP_007491970.1| - 7.6e-09 35.2 10.2 1e-05 24.9 2.0 3.1 1 1 2 3 3 3 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|452211856|ref|YP_007491970.1| - 1.2e-08 34.8 10.1 1.2 9.3 0.0 6.2 6 1 1 7 7 6 4 Fis1 C-terminal tetratricopeptide repeat TPR_6 PF13174.6 gi|452211856|ref|YP_007491970.1| - 2e-08 34.4 6.7 5.7 7.8 0.0 7.9 8 0 0 8 8 8 1 Tetratricopeptide repeat SRP_TPR_like PF17004.5 gi|452211856|ref|YP_007491970.1| - 8.5e-08 32.2 0.1 0.007 16.4 0.0 3.4 1 1 2 3 3 3 3 Putative TPR-like repeat TPR_10 PF13374.6 gi|452211856|ref|YP_007491970.1| - 8.4e-07 28.7 8.8 0.16 11.9 0.4 6.4 6 1 1 7 7 6 1 Tetratricopeptide repeat DUF3856 PF12968.7 gi|452211856|ref|YP_007491970.1| - 8.4e-06 25.9 10.2 0.27 11.3 0.4 6.0 2 1 2 5 5 4 3 Domain of Unknown Function (DUF3856) TPR_20 PF14561.6 gi|452211856|ref|YP_007491970.1| - 0.0001 22.6 6.1 0.45 10.9 0.3 4.8 2 2 3 5 5 5 2 Tetratricopeptide repeat Rapsyn_N PF10579.9 gi|452211856|ref|YP_007491970.1| - 0.0012 18.9 0.1 0.95 9.6 0.0 3.8 3 1 1 4 4 4 1 Rapsyn N-terminal myristoylation and linker region Alkyl_sulf_dimr PF14863.6 gi|452211856|ref|YP_007491970.1| - 0.0039 17.7 0.4 9.3 6.7 0.0 4.4 2 2 1 3 3 3 0 Alkyl sulfatase dimerisation ANAPC5 PF12862.7 gi|452211856|ref|YP_007491970.1| - 0.01 15.9 0.4 18 5.5 0.1 3.7 2 2 1 3 3 3 0 Anaphase-promoting complex subunit 5 Coatomer_E PF04733.14 gi|452211856|ref|YP_007491970.1| - 0.048 13.1 0.1 3.5 7.0 0.0 2.6 2 1 0 2 2 2 0 Coatomer epsilon subunit TPR_4 PF07721.14 gi|452211856|ref|YP_007491970.1| - 0.25 12.1 1.4 59 4.7 0.6 4.2 5 0 0 5 5 3 0 Tetratricopeptide repeat HTH_Bact PF18768.1 gi|452211856|ref|YP_007491970.1| - 1 9.0 2.8 1.4e+02 2.1 0.0 4.8 6 0 0 6 6 6 0 Helix-turn-helix bacterial domain NARP1 PF12569.8 gi|452211856|ref|YP_007491970.1| - 1.2 7.9 28.4 1.6 7.5 0.1 5.2 1 1 4 5 5 4 0 NMDA receptor-regulated protein 1 MIT PF04212.18 gi|452211856|ref|YP_007491970.1| - 2.1 8.5 9.2 7.4 6.7 0.1 4.7 5 0 0 5 5 4 0 MIT (microtubule interacting and transport) domain HTH_32 PF13565.6 gi|452211857|ref|YP_007491971.1| - 6.1e-16 58.8 0.1 1.9e-13 50.8 0.0 2.1 2 0 0 2 2 2 2 Homeodomain-like domain HTH_29 PF13551.6 gi|452211857|ref|YP_007491971.1| - 3.9e-12 46.0 0.1 3.3e-11 43.0 0.0 2.1 2 0 0 2 2 2 1 Winged helix-turn helix HTH_23 PF13384.6 gi|452211857|ref|YP_007491971.1| - 7.1e-08 32.0 0.1 5.3e-06 26.1 0.0 2.4 2 0 0 2 2 2 1 Homeodomain-like domain HTH_28 PF13518.6 gi|452211857|ref|YP_007491971.1| - 0.009 16.1 0.0 0.2 11.8 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|452211857|ref|YP_007491971.1| - 0.046 13.7 0.2 0.44 10.6 0.0 2.2 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain Neurensin PF14927.6 gi|452211859|ref|YP_007491973.1| - 1.9 8.2 4.2 1.9 8.2 0.1 2.0 1 1 1 2 2 2 0 Neurensin DUF3458_C PF17432.2 gi|452211861|ref|YP_007491975.1| - 0.17 11.3 0.0 0.2 11.0 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3458_C) ARM repeats DUF5439 PF17507.2 gi|452211863|ref|YP_007491977.1| - 0.032 14.5 0.1 0.036 14.3 0.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5439) PRiA4_ORF3 PF07929.11 gi|452211866|ref|YP_007491980.1| - 1.9e-65 219.8 0.5 2.1e-65 219.6 0.5 1.0 1 0 0 1 1 1 1 Plasmid pRiA4b ORF-3-like protein DUF1315 PF07023.12 gi|452211866|ref|YP_007491980.1| - 0.051 13.7 0.0 0.1 12.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1315) CBM_10 PF02013.16 gi|452211866|ref|YP_007491980.1| - 0.065 13.7 0.0 0.16 12.5 0.0 1.6 1 0 0 1 1 1 0 Cellulose or protein binding domain TPR_6 PF13174.6 gi|452211867|ref|YP_007491981.1| - 0.11 13.2 0.4 5.3 7.9 0.1 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat Cas6b_C PF17262.2 gi|452211868|ref|YP_007491982.1| - 1.7e-39 134.4 0.1 2.9e-39 133.7 0.1 1.4 1 0 0 1 1 1 1 Cas6b C-terminal domain Cas6b_N PF17955.1 gi|452211868|ref|YP_007491982.1| - 3.6e-32 110.5 0.0 6.3e-32 109.7 0.0 1.4 1 0 0 1 1 1 1 Cas6b N-terminal domain GIIM PF08388.11 gi|452211869|ref|YP_007491983.1| - 0.00094 19.2 0.0 0.0011 19.0 0.0 1.1 1 0 0 1 1 1 1 Group II intron, maturase-specific domain YoaP PF14268.6 gi|452211871|ref|YP_007491985.1| - 2.4e-15 55.7 0.0 4.5e-15 54.9 0.0 1.5 1 0 0 1 1 1 1 YoaP-like Acetyltransf_CG PF14542.6 gi|452211871|ref|YP_007491985.1| - 0.00032 20.8 0.0 0.00095 19.3 0.0 1.8 2 0 0 2 2 2 1 GCN5-related N-acetyl-transferase Acetyltransf_1 PF00583.25 gi|452211871|ref|YP_007491985.1| - 0.00067 19.9 0.1 0.0017 18.6 0.1 1.7 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|452211871|ref|YP_007491985.1| - 0.025 14.5 0.0 0.048 13.6 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|452211871|ref|YP_007491985.1| - 0.058 13.8 0.1 0.098 13.1 0.1 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanosarcina_mazei_Tuc01_uid190185/NC_020389.faa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanosarcina_mazei_Tuc01_uid190185/NC_020389.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanosarcina_mazei_Tuc01_uid190185/NC_020389.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanosarcina_mazei_Tuc01_uid190185/NC_020389.faa # Current dir: /oak/stanford/groups/akundaje/marinovg/genomes # Date: Mon Mar 25 16:11:33 2019 # [ok]