# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Cdc6_C PF09079.6 gi|154149550|ref|YP_001403168.1| - 8.5e-24 83.0 0.3 2e-23 81.8 0.0 1.8 2 0 0 2 2 2 1 CDC6, C terminal AAA_22 PF13401.1 gi|154149550|ref|YP_001403168.1| - 3e-12 46.8 0.0 7e-12 45.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|154149550|ref|YP_001403168.1| - 8.7e-12 45.4 0.1 2.6e-10 40.5 0.0 2.5 2 1 0 2 2 2 1 AAA ATPase domain AAA PF00004.24 gi|154149550|ref|YP_001403168.1| - 8.2e-09 35.7 0.3 5.3e-08 33.1 0.2 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Arch_ATPase PF01637.13 gi|154149550|ref|YP_001403168.1| - 1.9e-05 24.5 0.0 3e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 Archaeal ATPase DUF815 PF05673.8 gi|154149550|ref|YP_001403168.1| - 8.9e-05 21.5 0.0 0.0019 17.1 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF815) DEAD PF00270.24 gi|154149550|ref|YP_001403168.1| - 9.4e-05 21.9 2.2 0.0011 18.5 0.5 2.8 2 1 0 2 2 2 1 DEAD/DEAH box helicase KAP_NTPase PF07693.9 gi|154149550|ref|YP_001403168.1| - 0.00057 18.9 0.2 0.6 9.0 0.0 2.4 1 1 1 2 2 2 2 KAP family P-loop domain NACHT PF05729.7 gi|154149550|ref|YP_001403168.1| - 0.0039 16.8 0.0 0.0077 15.9 0.0 1.5 1 0 0 1 1 1 1 NACHT domain T2SE PF00437.15 gi|154149550|ref|YP_001403168.1| - 0.0065 15.4 0.0 0.013 14.4 0.0 1.5 1 0 0 1 1 1 1 Type II/IV secretion system protein Sigma54_activat PF00158.21 gi|154149550|ref|YP_001403168.1| - 0.017 14.5 0.0 0.052 13.0 0.0 1.8 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_2 PF07724.9 gi|154149550|ref|YP_001403168.1| - 0.025 14.4 0.6 0.11 12.4 0.4 2.0 1 1 0 1 1 1 0 AAA domain (Cdc48 subfamily) FtsK_SpoIIIE PF01580.13 gi|154149550|ref|YP_001403168.1| - 0.027 13.9 0.0 0.36 10.2 0.0 2.4 3 0 0 3 3 3 0 FtsK/SpoIIIE family AAA_25 PF13481.1 gi|154149550|ref|YP_001403168.1| - 0.028 13.8 0.0 0.055 12.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.17 gi|154149550|ref|YP_001403168.1| - 0.049 13.7 0.0 0.099 12.8 0.0 1.5 1 0 0 1 1 1 0 RNA helicase AAA_24 PF13479.1 gi|154149550|ref|YP_001403168.1| - 0.056 13.0 0.2 0.14 11.7 0.1 1.6 1 0 0 1 1 1 0 AAA domain PRC PF05239.11 gi|154149550|ref|YP_001403168.1| - 0.068 13.0 0.5 0.33 10.8 0.0 2.3 2 0 0 2 2 2 0 PRC-barrel domain AsnC_trans_reg PF01037.16 gi|154149551|ref|YP_001403169.1| - 9.9e-13 47.6 0.1 1.6e-12 46.9 0.1 1.3 1 0 0 1 1 1 1 AsnC family HTH_AsnC-type PF13404.1 gi|154149551|ref|YP_001403169.1| - 8.7e-11 41.1 1.2 1.3e-10 40.5 0.3 1.8 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.1 gi|154149551|ref|YP_001403169.1| - 2.8e-08 33.0 1.0 5.2e-08 32.1 0.7 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding KRAP_IP3R_bind PF14722.1 gi|154149551|ref|YP_001403169.1| - 0.029 13.9 0.1 0.046 13.3 0.1 1.3 1 0 0 1 1 1 0 Ki-ras-induced actin-interacting protein-IP3R-interacting domain MarR PF01047.17 gi|154149551|ref|YP_001403169.1| - 0.095 12.4 0.2 0.18 11.5 0.1 1.4 1 0 0 1 1 1 0 MarR family Aminotran_1_2 PF00155.16 gi|154149552|ref|YP_001403170.1| - 1.3e-68 231.6 0.0 1.5e-68 231.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.12 gi|154149552|ref|YP_001403170.1| - 2.5e-11 43.2 0.0 3.9e-11 42.6 0.0 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.14 gi|154149552|ref|YP_001403170.1| - 2.9e-07 29.5 0.0 4.1e-07 29.0 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.16 gi|154149552|ref|YP_001403170.1| - 5.9e-05 22.3 0.0 8.5e-05 21.8 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.15 gi|154149552|ref|YP_001403170.1| - 0.0011 17.3 0.0 0.0022 16.3 0.0 1.4 2 0 0 2 2 2 1 Cys/Met metabolism PLP-dependent enzyme OKR_DC_1 PF01276.15 gi|154149552|ref|YP_001403170.1| - 0.031 12.8 0.0 0.045 12.2 0.0 1.1 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain Adenylsucc_synt PF00709.16 gi|154149553|ref|YP_001403171.1| - 2.9e-83 279.9 5.8 3.3e-41 141.3 0.0 3.0 1 1 2 3 3 3 3 Adenylosuccinate synthetase Trm112p PF03966.11 gi|154149554|ref|YP_001403172.1| - 6.9e-09 35.9 1.2 1.2e-08 35.2 0.9 1.4 1 1 0 1 1 1 1 Trm112p-like protein Elf1 PF05129.8 gi|154149554|ref|YP_001403172.1| - 0.0072 15.9 0.0 0.0072 15.9 0.0 1.1 1 0 0 1 1 1 1 Transcription elongation factor Elf1 like Lar_restr_allev PF14354.1 gi|154149554|ref|YP_001403172.1| - 0.012 15.9 0.7 0.015 15.5 0.5 1.1 1 0 0 1 1 1 0 Restriction alleviation protein Lar Prim_Zn_Ribbon PF08273.7 gi|154149554|ref|YP_001403172.1| - 0.064 13.3 0.5 0.078 13.0 0.3 1.2 1 0 0 1 1 1 0 Zinc-binding domain of primase-helicase RNA_POL_M_15KD PF02150.11 gi|154149554|ref|YP_001403172.1| - 0.066 12.9 0.3 0.2 11.3 0.2 1.7 1 1 0 1 1 1 0 RNA polymerases M/15 Kd subunit RRN7 PF11781.3 gi|154149554|ref|YP_001403172.1| - 0.082 12.4 0.8 4.3 6.9 0.1 2.1 2 0 0 2 2 2 0 RNA polymerase I-specific transcription initiation factor Rrn7 DUF3481 PF11980.3 gi|154149555|ref|YP_001403173.1| - 0.019 14.7 0.1 0.077 12.8 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF3481) Sensor_TM1 PF13755.1 gi|154149555|ref|YP_001403173.1| - 0.076 12.5 0.4 0.14 11.6 0.3 1.4 1 0 0 1 1 1 0 Sensor N-terminal transmembrane domain CobD_Cbib PF03186.8 gi|154149556|ref|YP_001403174.1| - 3.6e-92 308.6 0.0 4.2e-92 308.3 0.0 1.0 1 0 0 1 1 1 1 CobD/Cbib protein SOR_SNZ PF01680.12 gi|154149557|ref|YP_001403175.1| - 5e-108 359.4 8.5 8.5e-108 358.7 5.9 1.3 1 0 0 1 1 1 1 SOR/SNZ family ThiG PF05690.9 gi|154149557|ref|YP_001403175.1| - 2.6e-10 39.7 6.2 7.5e-09 35.0 0.2 2.4 2 1 0 2 2 2 2 Thiazole biosynthesis protein ThiG Dus PF01207.12 gi|154149557|ref|YP_001403175.1| - 0.00086 18.2 0.3 0.33 9.7 0.0 2.3 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) PcrB PF01884.12 gi|154149557|ref|YP_001403175.1| - 0.0009 18.5 0.2 0.0023 17.2 0.0 1.7 2 0 0 2 2 2 1 PcrB family IGPS PF00218.16 gi|154149557|ref|YP_001403175.1| - 0.0012 17.9 0.1 0.021 13.8 0.0 2.2 2 0 0 2 2 2 1 Indole-3-glycerol phosphate synthase NMO PF03060.10 gi|154149557|ref|YP_001403175.1| - 0.0039 16.3 0.1 0.0039 16.3 0.1 1.8 2 1 0 2 2 2 1 Nitronate monooxygenase DUF561 PF04481.7 gi|154149557|ref|YP_001403175.1| - 0.011 14.6 0.5 0.048 12.6 0.0 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF561) NanE PF04131.9 gi|154149557|ref|YP_001403175.1| - 0.012 14.6 2.2 0.037 12.9 0.0 2.5 2 1 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase Ribosomal_S5_C PF03719.10 gi|154149557|ref|YP_001403175.1| - 0.049 12.9 0.8 0.16 11.2 0.0 2.3 3 0 0 3 3 3 0 Ribosomal protein S5, C-terminal domain Ifi-6-16 PF06140.8 gi|154149557|ref|YP_001403175.1| - 0.64 9.8 4.8 0.14 11.9 0.3 2.2 2 0 0 2 2 2 0 Interferon-induced 6-16 family SNO PF01174.14 gi|154149558|ref|YP_001403176.1| - 4.2e-51 173.2 0.0 5.2e-51 172.9 0.0 1.0 1 0 0 1 1 1 1 SNO glutamine amidotransferase family GATase_3 PF07685.9 gi|154149558|ref|YP_001403176.1| - 8.1e-05 22.2 0.0 9.1e-05 22.1 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain Fer4_10 PF13237.1 gi|154149559|ref|YP_001403177.1| - 7.7e-07 28.8 7.0 1.3e-06 28.1 4.8 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|154149559|ref|YP_001403177.1| - 1.2e-05 25.5 7.2 2.3e-05 24.6 5.0 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|154149559|ref|YP_001403177.1| - 3.5e-05 24.4 11.1 0.0023 18.6 7.7 2.3 1 1 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_6 PF12837.2 gi|154149559|ref|YP_001403177.1| - 6e-05 22.7 8.9 0.046 13.6 1.5 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.22 gi|154149559|ref|YP_001403177.1| - 6.4e-05 22.3 11.5 0.0081 15.7 2.1 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|154149559|ref|YP_001403177.1| - 6.4e-05 23.2 1.8 0.034 14.5 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|154149559|ref|YP_001403177.1| - 0.00011 22.0 3.0 0.017 15.1 0.0 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|154149559|ref|YP_001403177.1| - 0.0018 18.0 8.1 0.0027 17.5 0.6 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|154149559|ref|YP_001403177.1| - 0.0033 17.8 14.4 0.19 12.3 3.6 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|154149559|ref|YP_001403177.1| - 0.0044 17.2 11.8 0.0099 16.1 2.0 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|154149559|ref|YP_001403177.1| - 0.016 15.0 10.7 0.53 10.3 2.1 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_4 PF12800.2 gi|154149559|ref|YP_001403177.1| - 0.016 15.4 12.5 0.7 10.3 0.6 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Dehalogenase PF13486.1 gi|154149559|ref|YP_001403177.1| - 0.023 14.1 0.0 0.039 13.4 0.0 1.4 1 0 0 1 1 1 0 Reductive dehalogenase subunit Fer4_17 PF13534.1 gi|154149559|ref|YP_001403177.1| - 0.51 10.7 10.9 1.1 9.5 2.0 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain MIP PF00230.15 gi|154149560|ref|YP_001403178.1| - 2.8e-52 177.4 23.3 3.2e-52 177.2 16.1 1.0 1 0 0 1 1 1 1 Major intrinsic protein DNA_alkylation PF08713.6 gi|154149561|ref|YP_001403179.1| - 2.1e-60 203.8 1.3 2.4e-60 203.6 0.9 1.0 1 0 0 1 1 1 1 DNA alkylation repair enzyme Dicer_dimer PF03368.9 gi|154149561|ref|YP_001403179.1| - 0.002 17.8 0.0 0.0039 16.9 0.0 1.4 1 0 0 1 1 1 1 Dicer dimerisation domain HxlR PF01638.12 gi|154149562|ref|YP_001403180.1| - 1e-35 121.1 0.0 1.3e-35 120.9 0.0 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix PadR PF03551.9 gi|154149562|ref|YP_001403180.1| - 0.0076 16.0 0.0 0.013 15.2 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family DUF505 PF04458.7 gi|154149562|ref|YP_001403180.1| - 0.018 13.1 0.0 0.023 12.8 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF505) HTH_34 PF13601.1 gi|154149562|ref|YP_001403180.1| - 0.032 14.2 0.0 0.045 13.7 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain MarR PF01047.17 gi|154149562|ref|YP_001403180.1| - 0.056 13.1 0.0 0.075 12.7 0.0 1.2 1 0 0 1 1 1 0 MarR family Flavin_Reduct PF01613.13 gi|154149563|ref|YP_001403181.1| - 7.6e-23 81.0 0.0 9.4e-23 80.7 0.0 1.0 1 0 0 1 1 1 1 Flavin reductase like domain Nitroreductase PF00881.19 gi|154149564|ref|YP_001403182.1| - 2.6e-24 85.9 0.0 3.9e-24 85.3 0.0 1.3 1 0 0 1 1 1 1 Nitroreductase family Fer4_6 PF12837.2 gi|154149564|ref|YP_001403182.1| - 2.1e-10 39.9 12.7 4.7e-06 26.2 1.4 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.22 gi|154149564|ref|YP_001403182.1| - 1.4e-09 37.1 16.5 1e-06 28.0 1.9 2.7 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|154149564|ref|YP_001403182.1| - 9.7e-09 34.9 9.4 1.6e-08 34.1 6.5 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|154149564|ref|YP_001403182.1| - 5.4e-08 33.0 10.0 1.2e-07 32.0 6.9 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|154149564|ref|YP_001403182.1| - 1.3e-07 31.7 8.9 2.6e-07 30.7 6.2 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|154149564|ref|YP_001403182.1| - 4.1e-06 26.3 13.1 0.0011 18.8 1.8 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|154149564|ref|YP_001403182.1| - 5.4e-06 27.0 6.4 0.028 15.1 0.6 2.4 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|154149564|ref|YP_001403182.1| - 7e-06 25.9 11.4 1.7e-05 24.7 7.6 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|154149564|ref|YP_001403182.1| - 7.5e-05 23.0 12.1 0.0044 17.3 8.3 2.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|154149564|ref|YP_001403182.1| - 0.00011 21.9 10.9 0.024 14.4 1.6 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|154149564|ref|YP_001403182.1| - 0.00016 21.6 12.8 0.0029 17.8 1.6 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|154149564|ref|YP_001403182.1| - 0.00043 20.6 13.0 0.11 12.8 1.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|154149564|ref|YP_001403182.1| - 0.00085 19.7 18.4 0.11 13.0 3.8 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.1 gi|154149564|ref|YP_001403182.1| - 1.3 9.6 10.8 0.51 10.9 0.9 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|154149564|ref|YP_001403182.1| - 2.6 8.4 14.5 1.5 9.2 1.9 2.4 2 0 0 2 2 2 0 4Fe-4S single cluster domain CMD PF02627.15 gi|154149565|ref|YP_001403183.1| - 4.9e-36 122.4 0.3 2.8e-19 68.7 0.1 2.2 2 0 0 2 2 2 2 Carboxymuconolactone decarboxylase family TIM21 PF08294.6 gi|154149565|ref|YP_001403183.1| - 0.058 13.0 0.0 0.17 11.5 0.0 1.7 2 0 0 2 2 2 0 TIM21 DUF4026 PF13218.1 gi|154149565|ref|YP_001403183.1| - 0.059 12.2 0.0 0.088 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4026) FMN_red PF03358.10 gi|154149566|ref|YP_001403184.1| - 1.8e-23 82.7 0.0 2.3e-23 82.4 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|154149566|ref|YP_001403184.1| - 1.8e-09 37.4 0.0 2.1e-09 37.1 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold Symplekin_C PF12295.3 gi|154149566|ref|YP_001403184.1| - 0.11 12.3 0.0 0.14 12.0 0.0 1.1 1 0 0 1 1 1 0 Symplekin tight junction protein C terminal FMN_red PF03358.10 gi|154149567|ref|YP_001403185.1| - 3.6e-20 72.0 0.0 4.4e-20 71.7 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|154149567|ref|YP_001403185.1| - 1.3e-12 47.6 0.0 1.7e-12 47.2 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.2 gi|154149567|ref|YP_001403185.1| - 0.04 13.9 0.0 0.23 11.4 0.0 2.0 2 0 0 2 2 2 0 Flavodoxin domain Nitroreductase PF00881.19 gi|154149568|ref|YP_001403186.1| - 5.6e-37 127.1 0.0 7.5e-37 126.6 0.0 1.2 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.1 gi|154149568|ref|YP_001403186.1| - 5.8e-08 32.1 0.2 0.087 11.9 0.0 3.1 2 1 1 3 3 3 3 Putative TM nitroreductase TrkA_N PF02254.13 gi|154149568|ref|YP_001403186.1| - 0.042 13.8 0.1 0.13 12.2 0.0 1.9 1 1 1 2 2 2 0 TrkA-N domain DUF3186 PF11382.3 gi|154149568|ref|YP_001403186.1| - 0.071 12.2 0.0 0.088 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3186) YHS PF04945.8 gi|154149569|ref|YP_001403187.1| - 1.6e-14 53.4 7.0 2e-14 53.1 4.8 1.1 1 0 0 1 1 1 1 YHS domain Baculo_ME53 PF06061.6 gi|154149569|ref|YP_001403187.1| - 0.0054 15.7 1.9 0.0057 15.6 1.3 1.0 1 0 0 1 1 1 1 Baculoviridae ME53 Arc_trans_TRASH PF08394.5 gi|154149569|ref|YP_001403187.1| - 0.016 15.3 5.4 0.023 14.8 3.6 1.5 1 1 0 1 1 1 0 Archaeal TRASH domain Fasciclin PF02469.17 gi|154149570|ref|YP_001403188.1| - 1.2e-20 73.8 0.0 1.4e-20 73.5 0.0 1.1 1 0 0 1 1 1 1 Fasciclin domain Ribonuc_red_lgC PF02867.10 gi|154149571|ref|YP_001403189.1| - 1.4e-152 508.9 0.0 2.5e-109 366.3 0.0 3.0 1 1 1 2 2 2 2 Ribonucleotide reductase, barrel domain TSCPD PF12637.2 gi|154149571|ref|YP_001403189.1| - 1.7e-20 72.7 0.3 7e-20 70.7 0.1 2.0 2 0 0 2 2 2 1 TSCPD domain Ribonuc_red_lgN PF00317.16 gi|154149571|ref|YP_001403189.1| - 2.1e-14 53.0 0.0 5.2e-14 51.8 0.0 1.7 1 0 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain H_PPase PF03030.11 gi|154149572|ref|YP_001403190.1| - 2e-261 869.1 46.3 2.3e-261 868.9 32.1 1.0 1 0 0 1 1 1 1 Inorganic H+ pyrophosphatase FA_desaturase PF00487.19 gi|154149572|ref|YP_001403190.1| - 0.0062 16.0 4.1 0.0062 16.0 2.9 4.1 4 1 0 4 4 4 2 Fatty acid desaturase Oxidored_q1 PF00361.15 gi|154149573|ref|YP_001403191.1| - 4.1e-51 173.8 23.4 4.1e-51 173.8 16.2 4.0 3 2 2 5 5 5 1 NADH-Ubiquinone/plastoquinone (complex I), various chains Oxidored_q1_N PF00662.15 gi|154149573|ref|YP_001403191.1| - 3.5e-06 26.4 1.4 3.5e-06 26.4 1.0 4.1 4 0 0 4 4 4 2 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DUF4500 PF14937.1 gi|154149573|ref|YP_001403191.1| - 0.11 12.3 1.9 0.34 10.7 0.0 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF4500) NADHdh PF00146.16 gi|154149574|ref|YP_001403192.1| - 2.1e-17 63.1 11.6 7.7e-17 61.3 8.0 1.8 1 1 0 1 1 1 1 NADH dehydrogenase CitMHS PF03600.11 gi|154149574|ref|YP_001403192.1| - 0.00036 19.2 6.3 0.0012 17.4 4.4 1.8 1 1 0 1 1 1 1 Citrate transporter FA_desaturase PF00487.19 gi|154149574|ref|YP_001403192.1| - 0.65 9.3 15.6 0.06 12.7 0.9 2.7 1 1 0 2 2 2 0 Fatty acid desaturase UbiA PF01040.13 gi|154149574|ref|YP_001403192.1| - 3.1 6.9 26.6 0.092 11.9 13.8 1.8 2 0 0 2 2 2 0 UbiA prenyltransferase family Oxidored_q6 PF01058.17 gi|154149575|ref|YP_001403193.1| - 3.8e-27 94.4 2.0 5e-27 94.0 1.4 1.1 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Complex1_30kDa PF00329.14 gi|154149576|ref|YP_001403194.1| - 8.4e-15 54.8 0.0 1.1e-14 54.5 0.0 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Complex1_49kDa PF00346.14 gi|154149577|ref|YP_001403195.1| - 2.1e-42 144.9 0.0 5.9e-30 104.1 0.0 2.1 1 1 1 2 2 2 2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NiFeSe_Hases PF00374.14 gi|154149577|ref|YP_001403195.1| - 5.2e-14 51.8 0.6 3.2e-12 45.9 0.0 2.8 2 1 0 2 2 2 2 Nickel-dependent hydrogenase Fer4 PF00037.22 gi|154149578|ref|YP_001403196.1| - 2.3e-10 39.6 19.4 8.5e-07 28.3 2.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|154149578|ref|YP_001403196.1| - 5.6e-09 36.2 32.6 3.8e-06 27.1 14.4 2.0 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|154149578|ref|YP_001403196.1| - 5.9e-08 32.1 18.0 0.00011 21.9 2.6 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|154149578|ref|YP_001403196.1| - 1.5e-07 32.0 14.4 0.00041 21.0 1.8 2.2 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_6 PF12837.2 gi|154149578|ref|YP_001403196.1| - 2e-07 30.5 19.4 9.3e-06 25.2 2.6 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|154149578|ref|YP_001403196.1| - 2.2e-07 31.1 7.8 0.00037 20.7 0.2 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|154149578|ref|YP_001403196.1| - 2.8e-07 30.2 17.1 4.6e-07 29.6 11.9 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|154149578|ref|YP_001403196.1| - 6.6e-07 29.0 17.6 6.6e-07 29.0 12.2 1.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|154149578|ref|YP_001403196.1| - 1.8e-06 28.0 20.0 3e-06 27.4 13.9 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|154149578|ref|YP_001403196.1| - 0.00015 22.2 14.2 0.00018 22.0 0.8 2.8 2 1 0 2 2 2 1 4Fe-4S single cluster domain Fer4_11 PF13247.1 gi|154149578|ref|YP_001403196.1| - 0.00037 20.3 8.1 0.00053 19.8 5.6 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|154149578|ref|YP_001403196.1| - 0.00051 20.0 18.6 0.028 14.4 2.8 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|154149578|ref|YP_001403196.1| - 0.0068 16.6 22.8 0.019 15.2 3.9 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.1 gi|154149578|ref|YP_001403196.1| - 0.009 16.3 15.8 0.079 13.3 1.3 2.7 2 1 1 3 3 3 2 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|154149578|ref|YP_001403196.1| - 1.9 9.2 26.0 0.63 10.7 3.0 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.1 gi|154149578|ref|YP_001403196.1| - 5.7 7.4 22.0 3.2 8.2 3.0 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain LIM PF00412.17 gi|154149578|ref|YP_001403196.1| - 6.1 6.9 14.6 4.9 7.3 8.7 1.8 1 1 0 1 1 1 0 LIM domain MscL PF01741.13 gi|154149580|ref|YP_001403198.1| - 2.6e-15 56.6 7.0 3.4e-15 56.3 4.8 1.2 1 0 0 1 1 1 1 Large-conductance mechanosensitive channel, MscL DUF2061 PF09834.4 gi|154149580|ref|YP_001403198.1| - 0.1 12.8 5.6 0.94 9.7 0.1 2.6 2 1 0 2 2 2 0 Predicted membrane protein (DUF2061) SH PF01445.12 gi|154149580|ref|YP_001403198.1| - 0.19 11.3 1.2 0.73 9.5 0.1 2.0 2 0 0 2 2 2 0 Viral small hydrophobic protein DUF2798 PF11391.3 gi|154149580|ref|YP_001403198.1| - 0.45 10.3 7.9 0.52 10.0 0.2 2.7 1 1 1 3 3 3 0 Protein of unknown function (DUF2798) Fumarate_red_D PF02313.12 gi|154149580|ref|YP_001403198.1| - 0.78 9.6 4.6 1 9.2 3.2 1.2 1 0 0 1 1 1 0 Fumarate reductase subunit D zinc_ribbon_6 PF14599.1 gi|154149582|ref|YP_001403200.1| - 0.00082 19.1 2.9 0.058 13.1 2.8 2.0 1 1 1 2 2 2 1 Zinc-ribbon C1_1 PF00130.17 gi|154149582|ref|YP_001403200.1| - 0.029 14.0 1.2 0.038 13.7 0.9 1.2 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) OrfB_Zn_ribbon PF07282.6 gi|154149582|ref|YP_001403200.1| - 0.058 13.0 1.1 0.062 12.9 0.8 1.1 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Molybdop_Fe4S4 PF04879.11 gi|154149582|ref|YP_001403200.1| - 0.073 12.8 2.0 0.082 12.7 1.4 1.2 1 0 0 1 1 1 0 Molybdopterin oxidoreductase Fe4S4 domain Zn-ribbon_8 PF09723.5 gi|154149582|ref|YP_001403200.1| - 0.59 10.1 5.4 0.77 9.7 3.7 1.2 1 0 0 1 1 1 0 Zinc ribbon domain DNA_RNApol_7kD PF03604.8 gi|154149582|ref|YP_001403200.1| - 1.1 8.7 5.1 3.1 7.3 3.5 1.7 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit DUF326 PF03860.11 gi|154149582|ref|YP_001403200.1| - 3.2 7.7 6.7 1.1 9.1 1.2 2.1 2 0 0 2 2 2 0 Domain of Unknown Function (DUF326) PPDK_N PF01326.14 gi|154149583|ref|YP_001403201.1| - 2.1e-89 299.8 0.0 4.2e-89 298.8 0.0 1.4 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.13 gi|154149583|ref|YP_001403201.1| - 5.7e-59 199.4 0.0 8.7e-59 198.7 0.0 1.2 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.18 gi|154149583|ref|YP_001403201.1| - 2.6e-24 84.5 0.4 1.1e-23 82.5 0.2 2.2 2 0 0 2 2 2 1 PEP-utilising enzyme, mobile domain DNA_pol_E_B PF04042.11 gi|154149584|ref|YP_001403202.1| - 3.7e-14 52.4 0.0 5.8e-14 51.8 0.0 1.3 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B Metallophos_2 PF12850.2 gi|154149584|ref|YP_001403202.1| - 5.6e-12 45.7 0.0 2.1e-11 43.8 0.0 1.9 2 0 0 2 2 2 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|154149584|ref|YP_001403202.1| - 1.7e-08 34.1 0.0 2.7e-08 33.4 0.0 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase tRNA_anti-codon PF01336.20 gi|154149584|ref|YP_001403202.1| - 0.00012 21.8 0.0 0.00024 20.8 0.0 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain LysE PF01810.13 gi|154149585|ref|YP_001403203.1| - 2e-24 85.9 18.5 2.5e-24 85.6 12.8 1.1 1 0 0 1 1 1 1 LysE type translocator Borrelia_P13 PF05628.7 gi|154149585|ref|YP_001403203.1| - 2.3 7.9 8.2 1.9 8.2 2.0 2.3 2 0 0 2 2 2 0 Borrelia membrane protein P13 Peptidase_S24 PF00717.18 gi|154149586|ref|YP_001403204.1| - 0.00063 19.3 0.0 0.0013 18.2 0.0 1.6 1 0 0 1 1 1 1 Peptidase S24-like UPF0370 PF13980.1 gi|154149586|ref|YP_001403204.1| - 1.6 8.6 5.1 4.2 7.2 3.6 1.7 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0370) Radical_SAM PF04055.16 gi|154149587|ref|YP_001403205.1| - 5.7e-12 46.1 0.0 9.5e-12 45.4 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily SinI PF08671.5 gi|154149587|ref|YP_001403205.1| - 0.061 12.7 0.1 0.13 11.6 0.1 1.4 1 0 0 1 1 1 0 Anti-repressor SinI DUF2757 PF10955.3 gi|154149587|ref|YP_001403205.1| - 0.12 12.5 0.0 0.27 11.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2757) DUF1805 PF08827.6 gi|154149588|ref|YP_001403206.1| - 8.7e-17 60.6 0.0 1.2e-16 60.2 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1805) IMS PF00817.15 gi|154149588|ref|YP_001403206.1| - 0.034 13.9 0.0 0.041 13.6 0.0 1.1 1 0 0 1 1 1 0 impB/mucB/samB family Oleosin PF01277.12 gi|154149588|ref|YP_001403206.1| - 0.082 12.4 0.1 0.1 12.1 0.0 1.2 1 0 0 1 1 1 0 Oleosin Radical_SAM PF04055.16 gi|154149589|ref|YP_001403207.1| - 1.9e-11 44.3 0.1 2.6e-11 43.9 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Pyridox_ox_2 PF12900.2 gi|154149590|ref|YP_001403208.1| - 7.1e-32 110.1 0.0 7.9e-32 110.0 0.0 1.0 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_oxidase PF01243.15 gi|154149590|ref|YP_001403208.1| - 4.2e-10 39.5 0.0 6.1e-10 38.9 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase DUF123 PF01986.11 gi|154149591|ref|YP_001403209.1| - 2.8e-28 97.9 0.0 3.6e-28 97.5 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF123 Lactamase_B PF00753.22 gi|154149592|ref|YP_001403210.1| - 2.3e-26 92.6 3.5 3e-26 92.2 2.4 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|154149592|ref|YP_001403210.1| - 7.5e-07 28.8 0.9 1.2e-06 28.2 0.6 1.3 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Aconitase PF00330.15 gi|154149592|ref|YP_001403210.1| - 0.092 11.2 0.1 0.12 10.8 0.1 1.0 1 0 0 1 1 1 0 Aconitase family (aconitate hydratase) DUF4261 PF14080.1 gi|154149592|ref|YP_001403210.1| - 0.11 12.3 0.1 6.1 6.7 0.1 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF4261) ThiC PF01964.13 gi|154149593|ref|YP_001403211.1| - 6.4e-164 545.4 0.8 7.1e-164 545.3 0.6 1.0 1 0 0 1 1 1 1 ThiC family TPR_12 PF13424.1 gi|154149594|ref|YP_001403212.1| - 6.5e-07 29.1 9.4 0.0025 17.6 1.3 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.1 gi|154149594|ref|YP_001403212.1| - 8.9e-05 22.0 4.3 0.48 10.0 0.1 4.0 2 2 1 3 3 3 2 TPR repeat TPR_2 PF07719.12 gi|154149594|ref|YP_001403212.1| - 0.00045 19.9 13.0 0.51 10.3 0.0 5.2 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_8 PF13181.1 gi|154149594|ref|YP_001403212.1| - 0.00095 18.7 1.4 2.7 7.9 0.0 4.6 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_16 PF13432.1 gi|154149594|ref|YP_001403212.1| - 0.89 10.3 17.4 0.099 13.3 1.5 5.0 3 2 1 5 5 5 0 Tetratricopeptide repeat TPR_1 PF00515.23 gi|154149594|ref|YP_001403212.1| - 1.2 8.8 12.8 6.8 6.4 0.0 4.8 6 0 0 6 6 6 0 Tetratricopeptide repeat STAS PF01740.16 gi|154149595|ref|YP_001403213.1| - 4.4e-15 55.1 0.0 6.3e-15 54.6 0.0 1.3 1 1 0 1 1 1 1 STAS domain STAS_2 PF13466.1 gi|154149595|ref|YP_001403213.1| - 2.1e-08 34.0 0.0 2.7e-08 33.7 0.0 1.2 1 0 0 1 1 1 1 STAS domain STAS PF01740.16 gi|154149596|ref|YP_001403214.1| - 7.7e-10 38.2 0.0 2.4e-09 36.6 0.0 1.8 2 1 0 2 2 2 1 STAS domain STAS_2 PF13466.1 gi|154149596|ref|YP_001403214.1| - 0.0016 18.4 0.0 0.0025 17.8 0.0 1.3 1 0 0 1 1 1 1 STAS domain Acetyltransf_1 PF00583.19 gi|154149597|ref|YP_001403215.1| - 1.2e-09 38.0 0.1 4.1e-09 36.3 0.0 1.9 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|154149597|ref|YP_001403215.1| - 0.00017 21.6 0.0 0.0006 19.9 0.0 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|154149597|ref|YP_001403215.1| - 0.00025 21.1 0.0 0.00057 19.9 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|154149597|ref|YP_001403215.1| - 0.012 15.3 0.0 0.052 13.3 0.0 2.0 2 0 0 2 2 2 0 FR47-like protein Acetyltransf_9 PF13527.1 gi|154149597|ref|YP_001403215.1| - 0.065 13.0 0.0 0.17 11.7 0.0 1.7 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain DUF1697 PF08002.6 gi|154149598|ref|YP_001403216.1| - 2.1e-34 118.4 0.0 2.5e-34 118.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1697) LEA_2 PF03168.8 gi|154149599|ref|YP_001403217.1| - 9.2e-16 58.0 0.0 1.2e-15 57.6 0.0 1.2 1 0 0 1 1 1 1 Late embryogenesis abundant protein AIRC PF00731.15 gi|154149601|ref|YP_001403219.1| - 2.9e-45 153.2 1.1 3.2e-45 153.0 0.8 1.0 1 0 0 1 1 1 1 AIR carboxylase Hormone_4 PF00220.12 gi|154149601|ref|YP_001403219.1| - 0.1 12.3 0.3 0.23 11.1 0.2 1.6 1 0 0 1 1 1 0 Neurohypophysial hormones, N-terminal Domain Rota_NSP3 PF01665.11 gi|154149601|ref|YP_001403219.1| - 0.11 11.3 0.2 0.13 11.1 0.1 1.1 1 0 0 1 1 1 0 Rotavirus non-structural protein NSP3 Aminotran_5 PF00266.14 gi|154149602|ref|YP_001403220.1| - 1.2e-34 119.6 0.0 1.5e-34 119.3 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.16 gi|154149602|ref|YP_001403220.1| - 0.00058 19.0 0.2 0.0012 18.1 0.1 1.5 1 1 0 1 1 1 1 Beta-eliminating lyase DMRL_synthase PF00885.14 gi|154149603|ref|YP_001403221.1| - 4.2e-20 71.8 0.7 4.7e-20 71.7 0.5 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase DMRL_synthase PF00885.14 gi|154149604|ref|YP_001403222.1| - 2.5e-36 124.4 0.4 2.8e-36 124.3 0.3 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase Aminotran_1_2 PF00155.16 gi|154149605|ref|YP_001403223.1| - 3e-67 227.1 0.0 3.4e-67 226.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.12 gi|154149605|ref|YP_001403223.1| - 0.00035 19.7 0.0 0.00051 19.1 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.14 gi|154149605|ref|YP_001403223.1| - 0.0011 17.8 0.0 0.0017 17.1 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.15 gi|154149605|ref|YP_001403223.1| - 0.0027 16.0 0.0 0.0042 15.4 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.16 gi|154149605|ref|YP_001403223.1| - 0.025 13.7 0.0 0.039 13.0 0.0 1.3 1 0 0 1 1 1 0 Beta-eliminating lyase MFS_1 PF07690.11 gi|154149606|ref|YP_001403224.1| - 2.4e-49 167.9 47.7 2.4e-49 167.9 33.1 2.1 2 1 0 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|154149606|ref|YP_001403224.1| - 4.6e-05 22.1 21.6 4.6e-05 22.1 15.0 3.4 2 2 1 3 3 3 2 Sugar (and other) transporter N_methyl_3 PF13633.1 gi|154149606|ref|YP_001403224.1| - 3.1 7.8 0.0 3.1 7.8 0.0 7.8 9 0 0 9 9 9 0 Prokaryotic N-terminal methylation site Methyltransf_18 PF12847.2 gi|154149607|ref|YP_001403225.1| - 1.1e-09 38.8 0.0 2.3e-09 37.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|154149607|ref|YP_001403225.1| - 1.1e-08 34.8 0.0 1.6e-08 34.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|154149607|ref|YP_001403225.1| - 1e-07 32.3 0.0 1.8e-07 31.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|154149607|ref|YP_001403225.1| - 7.7e-06 25.7 0.0 1.2e-05 25.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|154149607|ref|YP_001403225.1| - 9e-05 22.8 0.0 0.00021 21.7 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain GidB PF02527.10 gi|154149607|ref|YP_001403225.1| - 0.00018 20.7 0.0 0.00026 20.1 0.0 1.2 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G RrnaAD PF00398.15 gi|154149607|ref|YP_001403225.1| - 0.00066 18.7 0.0 0.00097 18.2 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_26 PF13659.1 gi|154149607|ref|YP_001403225.1| - 0.00073 19.5 0.0 0.0011 18.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|154149607|ref|YP_001403225.1| - 0.00076 19.8 0.0 0.0017 18.7 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain DREV PF05219.7 gi|154149607|ref|YP_001403225.1| - 0.0029 16.5 0.0 0.004 16.0 0.0 1.2 1 0 0 1 1 1 1 DREV methyltransferase MTS PF05175.9 gi|154149607|ref|YP_001403225.1| - 0.003 16.9 0.0 0.0049 16.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_4 PF02390.12 gi|154149607|ref|YP_001403225.1| - 0.0038 16.2 0.0 0.0055 15.7 0.0 1.2 1 0 0 1 1 1 1 Putative methyltransferase DUF938 PF06080.7 gi|154149607|ref|YP_001403225.1| - 0.06 12.8 0.0 0.084 12.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF938) PCMT PF01135.14 gi|154149607|ref|YP_001403225.1| - 0.073 12.5 0.0 0.12 11.8 0.0 1.4 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) PrmA PF06325.8 gi|154149607|ref|YP_001403225.1| - 0.079 12.0 0.2 0.13 11.4 0.1 1.5 1 1 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) tRNA_U5-meth_tr PF05958.6 gi|154149607|ref|YP_001403225.1| - 0.082 11.5 0.0 0.11 11.1 0.0 1.1 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase CMAS PF02353.15 gi|154149607|ref|YP_001403225.1| - 0.12 11.3 0.0 0.17 10.9 0.0 1.3 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase TehB PF03848.9 gi|154149607|ref|YP_001403225.1| - 0.13 11.3 0.0 0.38 9.9 0.0 1.7 2 0 0 2 2 2 0 Tellurite resistance protein TehB MacB_PCD PF12704.2 gi|154149608|ref|YP_001403226.1| - 1.1e-29 103.6 4.8 1.1e-29 103.6 3.3 2.2 2 0 0 2 2 2 1 MacB-like periplasmic core domain FtsX PF02687.16 gi|154149608|ref|YP_001403226.1| - 2.6e-24 85.2 18.2 4.9e-23 81.1 7.7 2.4 2 0 0 2 2 2 2 FtsX-like permease family G0-G1_switch_2 PF15103.1 gi|154149608|ref|YP_001403226.1| - 0.029 14.6 0.2 0.12 12.6 0.1 2.1 2 0 0 2 2 2 0 G0/G1 switch protein 2 DUF4134 PF13572.1 gi|154149608|ref|YP_001403226.1| - 5.6 7.1 11.2 0.081 13.0 1.1 2.9 2 2 1 3 3 3 0 Domain of unknown function (DUF4134) ABC_tran PF00005.22 gi|154149609|ref|YP_001403227.1| - 3.9e-31 108.1 0.0 5.1e-31 107.7 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|154149609|ref|YP_001403227.1| - 6.6e-14 52.5 0.1 2.7e-07 30.8 0.0 2.1 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|154149609|ref|YP_001403227.1| - 8.4e-06 25.1 0.4 0.021 14.0 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_10 PF12846.2 gi|154149609|ref|YP_001403227.1| - 0.00013 21.5 0.1 0.0088 15.5 0.2 2.1 1 1 0 2 2 2 1 AAA-like domain DUF258 PF03193.11 gi|154149609|ref|YP_001403227.1| - 0.00024 20.3 0.0 0.00042 19.5 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_29 PF13555.1 gi|154149609|ref|YP_001403227.1| - 0.00025 20.5 0.1 0.00045 19.6 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.1 gi|154149609|ref|YP_001403227.1| - 0.00041 19.5 0.0 0.032 13.2 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA_16 PF13191.1 gi|154149609|ref|YP_001403227.1| - 0.0023 17.9 0.1 0.0045 16.9 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.1 gi|154149609|ref|YP_001403227.1| - 0.0043 16.4 0.1 0.03 13.7 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|154149609|ref|YP_001403227.1| - 0.015 16.1 0.1 0.029 15.1 0.1 1.8 1 1 0 1 1 1 0 AAA domain Arch_ATPase PF01637.13 gi|154149609|ref|YP_001403227.1| - 0.015 14.9 0.0 0.13 11.9 0.0 2.0 1 1 0 2 2 2 0 Archaeal ATPase AAA_18 PF13238.1 gi|154149609|ref|YP_001403227.1| - 0.021 15.1 0.2 0.087 13.1 0.2 2.1 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.1 gi|154149609|ref|YP_001403227.1| - 0.022 14.9 0.2 0.11 12.5 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.1 gi|154149609|ref|YP_001403227.1| - 0.041 14.1 0.1 0.073 13.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain T2SE PF00437.15 gi|154149609|ref|YP_001403227.1| - 0.042 12.7 0.1 0.093 11.6 0.0 1.6 2 0 0 2 2 2 0 Type II/IV secretion system protein SbcCD_C PF13558.1 gi|154149609|ref|YP_001403227.1| - 0.059 13.3 0.1 0.33 10.8 0.1 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit NTPase_1 PF03266.10 gi|154149609|ref|YP_001403227.1| - 0.089 12.5 0.4 9.4 5.9 0.1 2.2 2 0 0 2 2 2 0 NTPase MMR_HSR1 PF01926.18 gi|154149609|ref|YP_001403227.1| - 0.13 12.1 1.1 0.32 10.9 0.7 2.0 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_33 PF13671.1 gi|154149609|ref|YP_001403227.1| - 0.16 11.8 0.3 0.41 10.5 0.1 1.8 2 1 1 3 3 3 0 AAA domain CARDB PF07705.6 gi|154149610|ref|YP_001403228.1| - 0.00057 19.9 11.9 0.0013 18.7 0.3 3.5 3 0 0 3 3 3 2 CARDB DUF11 PF01345.13 gi|154149610|ref|YP_001403228.1| - 0.5 10.4 17.9 1 9.4 2.1 3.9 3 0 0 3 3 3 0 Domain of unknown function DUF11 Yip1 PF04893.12 gi|154149611|ref|YP_001403229.1| - 3e-40 137.5 19.6 3.5e-40 137.3 13.6 1.0 1 0 0 1 1 1 1 Yip1 domain DUF1282 PF06930.7 gi|154149611|ref|YP_001403229.1| - 2.8e-08 33.5 21.2 1.6e-07 31.1 14.6 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF1282) Rota_NSP4 PF01452.11 gi|154149611|ref|YP_001403229.1| - 0.039 13.2 0.3 0.075 12.3 0.2 1.4 1 0 0 1 1 1 0 Rotavirus non structural protein ATP-synt_J PF04911.7 gi|154149611|ref|YP_001403229.1| - 0.27 10.7 1.8 1.3 8.4 1.1 2.4 2 0 0 2 2 2 0 ATP synthase j chain DUF373 PF04123.8 gi|154149611|ref|YP_001403229.1| - 3.9 6.4 13.5 3.3 6.6 8.5 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF373) PALP PF00291.20 gi|154149612|ref|YP_001403230.1| - 1.2e-39 136.4 0.1 1.4e-39 136.1 0.1 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme NAD_kinase PF01513.16 gi|154149613|ref|YP_001403231.1| - 4.7e-41 140.4 0.2 5.8e-41 140.1 0.1 1.0 1 0 0 1 1 1 1 ATP-NAD kinase DeoRC PF00455.17 gi|154149613|ref|YP_001403231.1| - 3.1e-05 23.6 0.1 6e-05 22.7 0.1 1.5 1 0 0 1 1 1 1 DeoR C terminal sensor domain DAGK_cat PF00781.19 gi|154149613|ref|YP_001403231.1| - 0.00029 20.2 1.3 0.00064 19.1 0.1 2.1 3 0 0 3 3 3 1 Diacylglycerol kinase catalytic domain F420_oxidored PF03807.12 gi|154149613|ref|YP_001403231.1| - 0.024 15.0 3.3 1.2 9.6 0.0 3.2 3 1 0 3 3 3 0 NADP oxidoreductase coenzyme F420-dependent TetR_N PF00440.18 gi|154149613|ref|YP_001403231.1| - 0.04 13.5 0.7 0.42 10.2 0.1 2.9 2 0 0 2 2 2 0 Bacterial regulatory proteins, tetR family Glyco_hydro_42M PF08532.5 gi|154149613|ref|YP_001403231.1| - 0.1 11.7 0.0 0.4 9.8 0.0 1.8 2 0 0 2 2 2 0 Beta-galactosidase trimerisation domain Peripla_BP_4 PF13407.1 gi|154149613|ref|YP_001403231.1| - 5.4 6.2 10.2 13 5.0 7.0 1.6 1 1 0 1 1 1 0 Periplasmic binding protein domain Grp1_Fun34_YaaH PF01184.14 gi|154149614|ref|YP_001403232.1| - 2.5e-58 196.8 21.7 2.8e-58 196.6 15.0 1.0 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family DUF3353 PF11833.3 gi|154149614|ref|YP_001403232.1| - 6.8 6.1 12.4 0.91 8.9 3.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3353) AMP-binding PF00501.23 gi|154149615|ref|YP_001403233.1| - 1.5e-96 323.4 0.0 1.7e-96 323.1 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|154149615|ref|YP_001403233.1| - 4.9e-23 81.8 0.3 1.5e-22 80.3 0.2 1.9 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain ADP_ribosyl_GH PF03747.9 gi|154149616|ref|YP_001403234.1| - 3.3e-43 148.5 1.5 3.7e-43 148.3 1.0 1.0 1 0 0 1 1 1 1 ADP-ribosylglycohydrolase Semialdhyde_dh PF01118.19 gi|154149617|ref|YP_001403235.1| - 5.6e-33 113.8 0.0 1.5e-32 112.4 0.0 1.7 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.13 gi|154149617|ref|YP_001403235.1| - 1.6e-19 70.4 0.0 4.3e-19 69.0 0.0 1.6 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, dimerisation domain GFO_IDH_MocA PF01408.17 gi|154149617|ref|YP_001403235.1| - 4.1e-05 24.0 0.0 0.0001 22.7 0.0 1.7 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_10 PF13460.1 gi|154149617|ref|YP_001403235.1| - 0.0017 18.3 0.1 0.19 11.7 0.0 2.7 2 1 1 3 3 3 1 NADH(P)-binding F420_oxidored PF03807.12 gi|154149617|ref|YP_001403235.1| - 0.017 15.5 0.0 0.04 14.3 0.0 1.7 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent DapB_N PF01113.15 gi|154149617|ref|YP_001403235.1| - 0.022 14.6 0.0 0.043 13.7 0.0 1.5 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus CBS PF00571.23 gi|154149618|ref|YP_001403236.1| - 1.4e-34 117.6 1.5 9.8e-17 60.4 0.2 2.1 2 0 0 2 2 2 2 CBS domain DUF512 PF04459.7 gi|154149618|ref|YP_001403236.1| - 0.071 12.1 0.1 0.14 11.1 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF512) ArgJ PF01960.13 gi|154149619|ref|YP_001403237.1| - 1e-128 429.0 4.9 1.2e-128 428.8 3.4 1.0 1 0 0 1 1 1 1 ArgJ family AA_kinase PF00696.23 gi|154149620|ref|YP_001403238.1| - 7.2e-39 133.7 6.1 8.3e-39 133.5 4.2 1.0 1 0 0 1 1 1 1 Amino acid kinase family Thioredoxin PF00085.15 gi|154149621|ref|YP_001403239.1| - 1.2e-05 24.8 0.0 1.6e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.1 gi|154149621|ref|YP_001403239.1| - 0.0001 22.4 0.1 0.00015 21.8 0.1 1.4 1 1 0 1 1 1 1 Thioredoxin-like domain Glutaredoxin PF00462.19 gi|154149621|ref|YP_001403239.1| - 0.00091 19.1 0.1 0.0017 18.2 0.1 1.5 1 1 0 1 1 1 1 Glutaredoxin Thioredoxin_3 PF13192.1 gi|154149621|ref|YP_001403239.1| - 0.0011 18.7 0.2 0.0021 17.8 0.1 1.5 1 1 0 1 1 1 1 Thioredoxin domain Thioredoxin_8 PF13905.1 gi|154149621|ref|YP_001403239.1| - 0.0019 18.2 0.0 0.003 17.6 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin-like DSBA PF01323.15 gi|154149621|ref|YP_001403239.1| - 0.044 13.3 0.2 0.4 10.2 0.0 2.0 1 1 1 2 2 2 0 DSBA-like thioredoxin domain Redoxin PF08534.5 gi|154149621|ref|YP_001403239.1| - 0.06 12.8 0.0 0.072 12.6 0.0 1.3 1 0 0 1 1 1 0 Redoxin DUF2749 PF10907.3 gi|154149621|ref|YP_001403239.1| - 0.095 12.5 0.3 0.14 12.0 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2749) TraF PF13728.1 gi|154149621|ref|YP_001403239.1| - 0.13 11.7 0.0 0.18 11.2 0.0 1.3 1 0 0 1 1 1 0 F plasmid transfer operon protein DsbD PF02683.10 gi|154149622|ref|YP_001403240.1| - 6.9e-16 58.4 22.8 8.8e-16 58.1 15.8 1.1 1 0 0 1 1 1 1 Cytochrome C biogenesis protein transmembrane region DUF2910 PF11139.3 gi|154149622|ref|YP_001403240.1| - 1.9e-10 40.2 25.5 3e-09 36.3 17.8 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF2910) Arteri_Gl PF00951.13 gi|154149622|ref|YP_001403240.1| - 0.0039 16.7 7.2 0.0039 16.7 5.0 1.8 2 0 0 2 2 2 1 Arterivirus GL envelope glycoprotein DUF2516 PF10724.4 gi|154149622|ref|YP_001403240.1| - 0.017 15.0 1.3 0.017 15.0 0.9 2.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2516) CM_2 PF01817.16 gi|154149623|ref|YP_001403241.1| - 1.1e-19 70.2 0.7 1.5e-19 69.8 0.5 1.2 1 0 0 1 1 1 1 Chorismate mutase type II DUF1465 PF07323.7 gi|154149623|ref|YP_001403241.1| - 0.034 13.7 0.0 0.052 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1465) DivIC PF04977.10 gi|154149623|ref|YP_001403241.1| - 0.058 12.8 0.4 0.097 12.1 0.3 1.5 1 1 0 1 1 1 0 Septum formation initiator Peptidase_M50 PF02163.17 gi|154149624|ref|YP_001403242.1| - 1.8e-14 53.1 11.7 1.8e-14 53.1 8.1 1.9 2 1 0 2 2 2 1 Peptidase family M50 FMN_red PF03358.10 gi|154149625|ref|YP_001403243.1| - 8.8e-21 73.9 0.0 1.1e-20 73.6 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|154149625|ref|YP_001403243.1| - 1.5e-15 57.2 0.0 1.8e-15 56.9 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold FMN_red PF03358.10 gi|154149626|ref|YP_001403244.1| - 1.9e-17 63.1 0.0 2.7e-17 62.6 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|154149626|ref|YP_001403244.1| - 3.2e-06 26.7 0.0 4.1e-06 26.4 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold CMD PF02627.15 gi|154149627|ref|YP_001403245.1| - 6e-14 51.6 0.1 7.4e-14 51.3 0.1 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Telomere_reg-2 PF10193.4 gi|154149627|ref|YP_001403245.1| - 0.11 12.7 0.0 0.14 12.4 0.0 1.2 1 0 0 1 1 1 0 Telomere length regulation protein HC2 PF07382.6 gi|154149627|ref|YP_001403245.1| - 4 7.2 10.9 3 7.6 6.4 1.6 1 1 0 1 1 1 0 Histone H1-like nucleoprotein HC2 Desulfoferrod_N PF06397.7 gi|154149628|ref|YP_001403246.1| - 3.7e-18 64.6 5.6 4.1e-18 64.4 3.8 1.1 1 0 0 1 1 1 1 Desulfoferrodoxin, N-terminal domain TF_Zn_Ribbon PF08271.7 gi|154149628|ref|YP_001403246.1| - 0.019 14.2 1.1 0.03 13.6 0.8 1.4 1 1 0 1 1 1 0 TFIIB zinc-binding DUF3449 PF11931.3 gi|154149628|ref|YP_001403246.1| - 0.099 12.1 0.2 0.1 12.0 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3449) zf-FPG_IleRS PF06827.9 gi|154149628|ref|YP_001403246.1| - 0.13 11.9 0.7 0.19 11.4 0.5 1.4 1 0 0 1 1 1 0 Zinc finger found in FPG and IleRS RRN7 PF11781.3 gi|154149628|ref|YP_001403246.1| - 0.36 10.3 2.6 0.58 9.6 1.8 1.4 1 1 0 1 1 1 0 RNA polymerase I-specific transcription initiation factor Rrn7 FMN_red PF03358.10 gi|154149629|ref|YP_001403247.1| - 5.7e-20 71.3 0.0 6.5e-20 71.1 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|154149629|ref|YP_001403247.1| - 5.9e-10 38.9 0.0 6e-10 38.9 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold RadC PF04002.10 gi|154149630|ref|YP_001403248.1| - 1.6e-38 131.1 0.0 2.1e-38 130.7 0.0 1.2 1 0 0 1 1 1 1 RadC-like JAB domain Prok-JAB PF14464.1 gi|154149630|ref|YP_001403248.1| - 0.073 12.6 0.0 0.13 11.8 0.0 1.5 1 0 0 1 1 1 0 Prokaryotic homologs of the JAB domain Toxin-JAB1 PF15659.1 gi|154149630|ref|YP_001403248.1| - 0.08 12.8 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 JAB-like toxin 1 Rubrerythrin PF02915.12 gi|154149631|ref|YP_001403249.1| - 5.7e-18 65.5 8.8 4.2e-17 62.7 6.1 1.9 1 1 0 1 1 1 1 Rubrerythrin Ferritin PF00210.19 gi|154149631|ref|YP_001403249.1| - 3.4e-05 23.6 2.5 4.4e-05 23.2 1.8 1.1 1 0 0 1 1 1 1 Ferritin-like domain RecR PF02132.10 gi|154149631|ref|YP_001403249.1| - 0.014 14.8 1.5 0.14 11.5 1.2 2.2 1 1 1 2 2 2 0 RecR protein zf-H2C2_2 PF13465.1 gi|154149631|ref|YP_001403249.1| - 0.064 13.5 2.0 3.7 7.9 0.1 2.4 2 0 0 2 2 2 0 Zinc-finger double domain zf-FPG_IleRS PF06827.9 gi|154149631|ref|YP_001403249.1| - 0.13 11.9 0.8 17 5.1 0.0 2.4 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS Peptidase_C74 PF12387.3 gi|154149631|ref|YP_001403249.1| - 0.15 11.2 0.1 0.25 10.4 0.1 1.3 1 0 0 1 1 1 0 Pestivirus NS2 peptidase zf-ISL3 PF14690.1 gi|154149631|ref|YP_001403249.1| - 0.18 11.8 1.1 9.1 6.4 0.1 2.2 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DUF1610 PF07754.6 gi|154149631|ref|YP_001403249.1| - 0.2 11.7 5.7 0.55 10.3 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) Cys_rich_CPCC PF14206.1 gi|154149631|ref|YP_001403249.1| - 0.41 10.2 1.8 0.96 9.0 1.3 1.6 1 0 0 1 1 1 0 Cysteine-rich CPCC Desulfoferrod_N PF06397.7 gi|154149631|ref|YP_001403249.1| - 0.63 9.4 5.2 0.45 9.9 0.4 2.2 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain DUF3797 PF12677.2 gi|154149631|ref|YP_001403249.1| - 1 9.0 5.9 0.4 10.3 0.3 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) Rubredoxin PF00301.15 gi|154149631|ref|YP_001403249.1| - 3.3 7.6 6.0 50 3.8 0.3 2.3 1 1 1 2 2 2 0 Rubredoxin Rad50_zn_hook PF04423.9 gi|154149631|ref|YP_001403249.1| - 4.7 6.7 9.1 2.2 7.8 0.5 3.0 1 1 1 2 2 2 0 Rad50 zinc hook motif Laminin_G_3 PF13385.1 gi|154149632|ref|YP_001403250.1| - 1.6e-30 106.4 4.6 2.8e-30 105.6 1.7 2.1 2 0 0 2 2 2 1 Concanavalin A-like lectin/glucanases superfamily Laminin_G_2 PF02210.19 gi|154149632|ref|YP_001403250.1| - 4.9e-05 23.3 0.0 0.00012 22.1 0.0 1.6 1 0 0 1 1 1 1 Laminin G domain Laminin_G_1 PF00054.18 gi|154149632|ref|YP_001403250.1| - 0.016 15.2 0.0 0.035 14.1 0.0 1.6 1 0 0 1 1 1 0 Laminin G domain DUF756 PF05506.7 gi|154149632|ref|YP_001403250.1| - 0.15 12.5 0.5 1.7 9.2 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF756) Pyr_redox_2 PF07992.9 gi|154149633|ref|YP_001403251.1| - 1.1e-26 93.9 0.0 2.4e-26 92.8 0.0 1.5 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Glutaredoxin PF00462.19 gi|154149633|ref|YP_001403251.1| - 3.8e-18 65.2 0.1 1.2e-17 63.6 0.0 1.9 1 0 0 1 1 1 1 Glutaredoxin Pyr_redox_3 PF13738.1 gi|154149633|ref|YP_001403251.1| - 6.1e-16 59.0 0.6 5.2e-13 49.5 0.2 3.0 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GST_N_3 PF13417.1 gi|154149633|ref|YP_001403251.1| - 1.4e-07 31.6 0.0 2.3e-07 30.9 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain Pyr_redox PF00070.22 gi|154149633|ref|YP_001403251.1| - 1.8e-07 31.4 2.1 2.5e-06 27.8 0.1 2.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.12 gi|154149633|ref|YP_001403251.1| - 3.1e-06 26.4 6.4 4.3e-06 25.9 0.5 3.1 4 1 0 4 4 4 1 Thi4 family FAD_oxidored PF12831.2 gi|154149633|ref|YP_001403251.1| - 3.6e-06 26.3 0.2 5.3e-05 22.4 0.1 2.2 2 0 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.19 gi|154149633|ref|YP_001403251.1| - 4.9e-05 22.3 1.0 4.9e-05 22.3 0.7 3.6 3 1 1 4 4 4 1 FAD binding domain HI0933_like PF03486.9 gi|154149633|ref|YP_001403251.1| - 6e-05 21.6 3.6 0.018 13.5 0.2 3.4 3 0 0 3 3 3 1 HI0933-like protein ArsC PF03960.10 gi|154149633|ref|YP_001403251.1| - 8.4e-05 22.6 0.1 0.0034 17.4 0.0 3.1 2 2 2 4 4 4 1 ArsC family DAO PF01266.19 gi|154149633|ref|YP_001403251.1| - 0.00022 20.2 5.2 0.097 11.5 1.1 3.2 2 1 0 3 3 3 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.1 gi|154149633|ref|YP_001403251.1| - 0.00039 20.3 1.2 0.0042 17.0 0.0 2.5 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain K_oxygenase PF13434.1 gi|154149633|ref|YP_001403251.1| - 0.00056 18.9 0.2 0.24 10.2 0.0 2.9 2 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) GST_N_2 PF13409.1 gi|154149633|ref|YP_001403251.1| - 0.00063 19.6 0.0 0.0011 18.8 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GIDA PF01134.17 gi|154149633|ref|YP_001403251.1| - 0.0013 17.6 6.8 0.017 13.9 0.3 3.4 4 0 0 4 4 4 1 Glucose inhibited division protein A NAD_binding_7 PF13241.1 gi|154149633|ref|YP_001403251.1| - 0.0021 18.2 0.6 0.32 11.2 0.0 3.1 3 1 0 3 3 3 1 Putative NAD(P)-binding FMO-like PF00743.14 gi|154149633|ref|YP_001403251.1| - 0.0054 14.9 0.2 0.011 13.9 0.0 1.6 2 0 0 2 2 2 1 Flavin-binding monooxygenase-like DSBA PF01323.15 gi|154149633|ref|YP_001403251.1| - 0.014 14.9 0.5 5.4 6.5 0.0 2.6 1 1 1 2 2 2 0 DSBA-like thioredoxin domain Lycopene_cycl PF05834.7 gi|154149633|ref|YP_001403251.1| - 0.016 14.1 4.0 1.6 7.6 0.3 2.8 2 1 1 3 3 3 0 Lycopene cyclase protein DUF836 PF05768.9 gi|154149633|ref|YP_001403251.1| - 0.023 14.9 0.0 0.062 13.5 0.0 1.8 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) FAD_binding_3 PF01494.14 gi|154149633|ref|YP_001403251.1| - 0.033 13.2 0.7 0.079 12.0 0.1 1.9 2 0 0 2 2 2 0 FAD binding domain Thioredoxin_2 PF13098.1 gi|154149633|ref|YP_001403251.1| - 0.034 14.3 0.0 0.088 13.0 0.0 1.7 1 0 0 1 1 1 0 Thioredoxin-like domain Thioredoxin_3 PF13192.1 gi|154149633|ref|YP_001403251.1| - 0.058 13.2 0.2 0.24 11.2 0.0 2.1 2 0 0 2 2 2 0 Thioredoxin domain Trp_halogenase PF04820.9 gi|154149633|ref|YP_001403251.1| - 0.12 10.9 3.1 0.25 9.9 0.3 2.1 2 0 0 2 2 2 0 Tryptophan halogenase CW_binding_2 PF04122.7 gi|154149633|ref|YP_001403251.1| - 0.19 11.9 1.0 51 4.1 0.0 3.4 3 1 0 3 3 3 0 Putative cell wall binding repeat 2 NAD_binding_9 PF13454.1 gi|154149633|ref|YP_001403251.1| - 0.3 10.8 7.0 6.5 6.4 0.0 3.9 5 0 0 5 5 5 0 FAD-NAD(P)-binding CCG PF02754.11 gi|154149634|ref|YP_001403252.1| - 1.3e-30 105.2 12.2 6e-15 55.0 0.1 3.9 4 1 0 4 4 4 2 Cysteine-rich domain Fer2_3 PF13085.1 gi|154149634|ref|YP_001403252.1| - 4.1e-26 90.9 0.1 1.6e-25 89.0 0.0 2.0 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer4_8 PF13183.1 gi|154149634|ref|YP_001403252.1| - 1.8e-09 37.4 5.2 1.8e-09 37.4 3.6 3.3 4 0 0 4 4 4 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|154149634|ref|YP_001403252.1| - 1.6e-08 34.8 14.8 2.8e-05 24.4 0.4 4.7 4 1 1 5 5 5 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|154149634|ref|YP_001403252.1| - 1.7e-07 30.8 6.4 1.7e-07 30.8 4.4 3.0 4 1 0 4 4 3 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|154149634|ref|YP_001403252.1| - 2.5e-07 30.8 5.7 2.5e-07 30.8 3.9 3.6 4 0 0 4 4 3 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|154149634|ref|YP_001403252.1| - 8e-07 29.3 3.8 8e-07 29.3 2.7 3.6 5 0 0 5 5 4 1 4Fe-4S dicluster domain Fer2_4 PF13510.1 gi|154149634|ref|YP_001403252.1| - 3.2e-06 26.8 3.4 1.8e-05 24.4 0.3 3.3 3 0 0 3 3 3 1 2Fe-2S iron-sulfur cluster binding domain Fer4_7 PF12838.2 gi|154149634|ref|YP_001403252.1| - 5.6e-06 26.6 7.2 5.6e-06 26.6 5.0 3.8 4 1 0 4 4 4 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|154149634|ref|YP_001403252.1| - 0.00017 21.2 25.1 0.00067 19.4 1.7 4.5 4 0 0 4 4 4 2 4Fe-4S binding domain Fer2 PF00111.22 gi|154149634|ref|YP_001403252.1| - 0.00061 19.4 1.1 0.00061 19.4 0.8 2.5 3 0 0 3 3 3 1 2Fe-2S iron-sulfur cluster binding domain Fer4 PF00037.22 gi|154149634|ref|YP_001403252.1| - 0.0039 16.7 2.8 0.0039 16.7 1.9 4.3 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_4 PF12800.2 gi|154149634|ref|YP_001403252.1| - 0.0071 16.5 1.0 0.0071 16.5 0.7 4.6 5 0 0 5 5 3 2 4Fe-4S binding domain Fer4_15 PF13459.1 gi|154149634|ref|YP_001403252.1| - 0.32 11.6 0.1 0.32 11.6 0.1 3.5 4 0 0 4 4 2 0 4Fe-4S single cluster domain Fer4_16 PF13484.1 gi|154149634|ref|YP_001403252.1| - 3.8 8.3 19.6 1.6 9.4 8.5 3.4 2 1 1 3 3 3 0 4Fe-4S double cluster binding domain FAD_binding_2 PF00890.19 gi|154149635|ref|YP_001403253.1| - 2.6e-92 309.8 5.0 3.4e-92 309.4 3.5 1.1 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.15 gi|154149635|ref|YP_001403253.1| - 1e-15 57.7 0.1 2.3e-15 56.5 0.0 1.6 1 1 0 1 1 1 1 Fumarate reductase flavoprotein C-term Pyr_redox_2 PF07992.9 gi|154149635|ref|YP_001403253.1| - 1.5e-09 38.0 4.3 9.5e-08 32.1 3.0 2.9 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|154149635|ref|YP_001403253.1| - 0.011 14.6 4.2 0.029 13.2 1.6 2.1 2 0 0 2 2 2 0 Glucose inhibited division protein A FAD_oxidored PF12831.2 gi|154149635|ref|YP_001403253.1| - 0.018 14.1 5.1 0.043 12.8 3.5 1.6 1 1 0 1 1 1 0 FAD dependent oxidoreductase HI0933_like PF03486.9 gi|154149635|ref|YP_001403253.1| - 0.072 11.5 5.1 1.3 7.3 1.2 2.7 3 0 0 3 3 3 0 HI0933-like protein DAO PF01266.19 gi|154149635|ref|YP_001403253.1| - 0.4 9.5 6.0 1.3 7.8 0.0 2.4 2 0 0 2 2 2 0 FAD dependent oxidoreductase AA_kinase PF00696.23 gi|154149636|ref|YP_001403254.1| - 3.7e-49 167.4 0.4 6.1e-49 166.7 0.1 1.5 2 0 0 2 2 2 1 Amino acid kinase family ACT_7 PF13840.1 gi|154149636|ref|YP_001403254.1| - 4.6e-21 74.1 1.4 1.1e-09 37.6 0.0 3.1 2 0 0 2 2 2 2 ACT domain ACT PF01842.20 gi|154149636|ref|YP_001403254.1| - 5.3e-18 64.1 3.8 3.9e-08 32.6 0.1 3.2 3 0 0 3 3 3 2 ACT domain AIRS_C PF02769.17 gi|154149637|ref|YP_001403255.1| - 2.8e-23 82.6 0.0 4.8e-23 81.8 0.0 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.19 gi|154149637|ref|YP_001403255.1| - 1e-14 54.5 1.7 1.2e-14 54.2 0.4 1.7 2 0 0 2 2 2 1 AIR synthase related protein, N-terminal domain Cache_1 PF02743.13 gi|154149637|ref|YP_001403255.1| - 0.12 11.9 0.5 14 5.3 0.0 2.6 3 0 0 3 3 3 0 Cache domain RecR PF02132.10 gi|154149638|ref|YP_001403256.1| - 0.24 10.8 0.2 0.24 10.8 0.1 1.7 2 0 0 2 2 2 0 RecR protein zf-ZPR1 PF03367.8 gi|154149639|ref|YP_001403257.1| - 9.5e-42 141.8 0.0 1.1e-41 141.6 0.0 1.0 1 0 0 1 1 1 1 ZPR1 zinc-finger domain zf-ribbon_3 PF13248.1 gi|154149639|ref|YP_001403257.1| - 0.014 14.5 0.7 1.4 8.2 0.0 2.3 2 0 0 2 2 2 0 zinc-ribbon domain DUF2321 PF10083.4 gi|154149639|ref|YP_001403257.1| - 0.015 14.7 0.0 0.019 14.4 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2321) Lar_restr_allev PF14354.1 gi|154149639|ref|YP_001403257.1| - 0.078 13.2 0.1 0.17 12.1 0.1 1.6 1 0 0 1 1 1 0 Restriction alleviation protein Lar zinc_ribbon_2 PF13240.1 gi|154149639|ref|YP_001403257.1| - 0.088 12.3 2.4 7.6 6.1 0.0 2.4 2 0 0 2 2 2 0 zinc-ribbon domain UPF0547 PF10571.4 gi|154149639|ref|YP_001403257.1| - 0.11 12.1 1.9 0.24 11.1 0.2 2.3 2 1 0 2 2 2 0 Uncharacterised protein family UPF0547 DUF552 PF04472.7 gi|154149640|ref|YP_001403258.1| - 8e-19 67.3 1.5 1e-18 66.9 1.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF552) PUA PF01472.15 gi|154149641|ref|YP_001403259.1| - 2.4e-15 56.0 0.9 4.4e-15 55.1 0.6 1.4 1 0 0 1 1 1 1 PUA domain LSM PF01423.17 gi|154149642|ref|YP_001403260.1| - 3.4e-20 71.3 1.0 3.8e-20 71.2 0.7 1.0 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.1 gi|154149642|ref|YP_001403260.1| - 0.011 15.6 0.1 0.016 15.1 0.1 1.3 1 0 0 1 1 1 0 Ataxin 2 SM domain Ribosomal_L37e PF01907.14 gi|154149643|ref|YP_001403261.1| - 4e-27 93.7 8.6 4.4e-27 93.6 5.9 1.0 1 0 0 1 1 1 1 Ribosomal protein L37e FYVE_2 PF02318.11 gi|154149643|ref|YP_001403261.1| - 0.0013 18.5 1.6 0.0015 18.3 1.1 1.1 1 0 0 1 1 1 1 FYVE-type zinc finger DZR PF12773.2 gi|154149643|ref|YP_001403261.1| - 0.0014 18.4 0.9 0.0016 18.2 0.6 1.2 1 0 0 1 1 1 1 Double zinc ribbon DUF35_N PF12172.3 gi|154149643|ref|YP_001403261.1| - 0.0027 17.5 2.9 0.004 17.0 2.0 1.2 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) Auto_anti-p27 PF06677.7 gi|154149643|ref|YP_001403261.1| - 0.0052 16.5 1.9 0.012 15.3 1.4 1.6 1 1 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-C2HC5 PF06221.8 gi|154149643|ref|YP_001403261.1| - 0.011 15.4 0.6 0.012 15.3 0.4 1.1 1 0 0 1 1 1 0 Putative zinc finger motif, C2HC5-type zinc_ribbon_6 PF14599.1 gi|154149643|ref|YP_001403261.1| - 0.05 13.3 0.8 0.067 12.9 0.6 1.2 1 0 0 1 1 1 0 Zinc-ribbon zf-ribbon_3 PF13248.1 gi|154149643|ref|YP_001403261.1| - 0.052 12.7 2.4 0.1 11.8 1.6 1.6 1 1 0 1 1 1 0 zinc-ribbon domain Spt4 PF06093.8 gi|154149643|ref|YP_001403261.1| - 0.056 13.3 0.4 0.067 13.0 0.3 1.2 1 0 0 1 1 1 0 Spt4/RpoE2 zinc finger FAM72 PF14976.1 gi|154149643|ref|YP_001403261.1| - 0.068 13.0 0.2 0.069 12.9 0.1 1.1 1 0 0 1 1 1 0 FAM72 protein zf-C2H2_3 PF13878.1 gi|154149643|ref|YP_001403261.1| - 0.099 12.2 3.1 2.3 7.8 0.2 2.2 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO zf-HYPF PF07503.7 gi|154149643|ref|YP_001403261.1| - 0.16 11.4 2.0 4.6 6.7 0.2 2.1 2 0 0 2 2 2 0 HypF finger Ribosomal_L32p PF01783.18 gi|154149643|ref|YP_001403261.1| - 0.23 11.6 2.0 0.35 11.0 1.4 1.4 1 1 0 1 1 1 0 Ribosomal L32p protein family zf-piccolo PF05715.8 gi|154149643|ref|YP_001403261.1| - 0.26 11.3 1.6 0.61 10.1 1.1 1.7 1 1 0 1 1 1 0 Piccolo Zn-finger zf-RING_5 PF14634.1 gi|154149643|ref|YP_001403261.1| - 0.32 10.7 3.5 0.46 10.2 2.4 1.2 1 0 0 1 1 1 0 zinc-RING finger domain RNA_POL_M_15KD PF02150.11 gi|154149643|ref|YP_001403261.1| - 0.68 9.6 3.6 3.1 7.5 0.1 2.1 1 1 1 2 2 2 0 RNA polymerases M/15 Kd subunit GATase_7 PF13537.1 gi|154149644|ref|YP_001403262.1| - 4.2e-19 68.5 0.0 6.3e-19 67.9 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.1 gi|154149644|ref|YP_001403262.1| - 2.4e-17 63.1 0.0 4.3e-17 62.3 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_2 PF00310.16 gi|154149644|ref|YP_001403262.1| - 9e-17 60.8 0.3 7.1e-12 44.6 0.0 3.0 1 1 1 2 2 2 2 Glutamine amidotransferases class-II Pribosyltran PF00156.22 gi|154149644|ref|YP_001403262.1| - 2.4e-13 49.9 0.1 5.5e-13 48.7 0.1 1.6 1 0 0 1 1 1 1 Phosphoribosyl transferase domain GATase_4 PF13230.1 gi|154149644|ref|YP_001403262.1| - 2.3e-09 36.3 0.0 3.3e-09 35.8 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferases class-II UPRTase PF14681.1 gi|154149644|ref|YP_001403262.1| - 0.022 13.9 0.2 0.053 12.7 0.0 1.6 2 0 0 2 2 2 0 Uracil phosphoribosyltransferase PRTase_2 PF15609.1 gi|154149644|ref|YP_001403262.1| - 0.06 12.6 0.1 0.13 11.5 0.0 1.8 1 1 0 1 1 1 0 Phosphoribosyl transferase Methyltransf_18 PF12847.2 gi|154149645|ref|YP_001403263.1| - 9.2e-20 71.3 0.0 1.8e-19 70.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|154149645|ref|YP_001403263.1| - 1.7e-19 70.0 0.0 6.5e-19 68.2 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|154149645|ref|YP_001403263.1| - 3.9e-17 62.5 0.0 7.8e-17 61.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|154149645|ref|YP_001403263.1| - 8.1e-17 61.2 0.0 9.9e-17 60.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|154149645|ref|YP_001403263.1| - 1.1e-12 47.6 0.0 1.4e-12 47.2 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.1 gi|154149645|ref|YP_001403263.1| - 1.2e-12 47.8 0.0 1.9e-12 47.2 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|154149645|ref|YP_001403263.1| - 1.3e-12 47.9 0.0 2.1e-12 47.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|154149645|ref|YP_001403263.1| - 3.9e-10 39.7 0.0 8.2e-10 38.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|154149645|ref|YP_001403263.1| - 2e-09 37.0 0.0 3.6e-09 36.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_2 PF00891.13 gi|154149645|ref|YP_001403263.1| - 9.8e-07 28.2 0.0 1.2e-06 27.8 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase CMAS PF02353.15 gi|154149645|ref|YP_001403263.1| - 1.5e-05 24.1 0.0 2.5e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase RrnaAD PF00398.15 gi|154149645|ref|YP_001403263.1| - 3.8e-05 22.8 0.0 5.4e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_PK PF05891.7 gi|154149645|ref|YP_001403263.1| - 0.0011 18.2 0.0 0.0018 17.6 0.0 1.3 1 0 0 1 1 1 1 AdoMet dependent proline di-methyltransferase NodS PF05401.6 gi|154149645|ref|YP_001403263.1| - 0.0059 16.0 0.0 0.0079 15.6 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_16 PF10294.4 gi|154149645|ref|YP_001403263.1| - 0.017 14.5 0.0 0.027 13.9 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase Methyltransf_32 PF13679.1 gi|154149645|ref|YP_001403263.1| - 0.047 13.3 0.0 0.065 12.9 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain PCMT PF01135.14 gi|154149645|ref|YP_001403263.1| - 0.054 13.0 0.0 0.084 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_5 PF01795.14 gi|154149645|ref|YP_001403263.1| - 0.054 12.7 0.0 0.081 12.1 0.0 1.2 1 0 0 1 1 1 0 MraW methylase family Bin3 PF06859.7 gi|154149645|ref|YP_001403263.1| - 0.15 12.1 0.0 0.26 11.2 0.0 1.4 1 0 0 1 1 1 0 Bicoid-interacting protein 3 (Bin3) Thioredoxin PF00085.15 gi|154149646|ref|YP_001403264.1| - 7.7e-28 96.2 0.0 1.1e-27 95.7 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.1 gi|154149646|ref|YP_001403264.1| - 2.3e-09 37.4 0.0 3.6e-08 33.5 0.0 2.1 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.1 gi|154149646|ref|YP_001403264.1| - 6.9e-07 29.2 0.0 0.0003 20.8 0.0 2.3 1 1 1 2 2 2 2 Thioredoxin-like Redoxin PF08534.5 gi|154149646|ref|YP_001403264.1| - 3.4e-05 23.4 0.0 4.5e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 Redoxin Thioredoxin_6 PF13848.1 gi|154149646|ref|YP_001403264.1| - 5.6e-05 23.0 0.0 7.8e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like domain AhpC-TSA PF00578.16 gi|154149646|ref|YP_001403264.1| - 0.0001 21.9 0.0 0.00012 21.7 0.0 1.4 1 0 0 1 1 1 1 AhpC/TSA family Thioredoxin_9 PF14595.1 gi|154149646|ref|YP_001403264.1| - 0.00012 21.6 0.0 0.00021 20.8 0.0 1.3 1 1 0 1 1 1 1 Thioredoxin Thioredoxin_7 PF13899.1 gi|154149646|ref|YP_001403264.1| - 0.00044 20.2 0.0 0.0014 18.6 0.0 1.8 1 1 0 1 1 1 1 Thioredoxin-like HyaE PF07449.6 gi|154149646|ref|YP_001403264.1| - 0.011 15.5 0.0 0.027 14.3 0.0 1.7 1 1 0 1 1 1 0 Hydrogenase-1 expression protein HyaE EF-1_beta_acid PF10587.4 gi|154149646|ref|YP_001403264.1| - 0.028 14.5 0.1 0.028 14.5 0.1 1.9 2 0 0 2 2 2 0 Eukaryotic elongation factor 1 beta central acidic region Thioredoxin_3 PF13192.1 gi|154149646|ref|YP_001403264.1| - 0.059 13.1 0.0 0.11 12.3 0.0 1.6 1 1 0 1 1 1 0 Thioredoxin domain Mt_ATP-synt_D PF05873.7 gi|154149646|ref|YP_001403264.1| - 0.074 12.6 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 ATP synthase D chain, mitochondrial (ATP5H) OCC1 PF15506.1 gi|154149647|ref|YP_001403265.1| - 0.014 15.2 1.1 0.02 14.7 0.8 1.2 1 0 0 1 1 1 0 OCC1 family Ribosomal_60s PF00428.14 gi|154149647|ref|YP_001403265.1| - 0.62 10.4 5.1 1 9.8 3.5 1.3 1 0 0 1 1 1 0 60s Acidic ribosomal protein CRPA PF05745.6 gi|154149648|ref|YP_001403266.1| - 0.0068 16.2 2.0 2 8.2 0.1 2.2 2 0 0 2 2 2 2 Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA) DUF1469 PF07332.6 gi|154149648|ref|YP_001403266.1| - 6.1 6.5 9.6 9.5 5.9 6.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1469) DUF2905 PF11146.3 gi|154149648|ref|YP_001403266.1| - 8.5 6.4 8.5 19 5.2 0.3 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF2905) AMP-binding PF00501.23 gi|154149649|ref|YP_001403267.1| - 1.4e-100 336.6 0.1 1.8e-100 336.2 0.1 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|154149649|ref|YP_001403267.1| - 3.4e-18 66.3 2.2 3.4e-18 66.3 1.5 2.6 3 0 0 3 3 3 1 AMP-binding enzyme C-terminal domain KaiC PF06745.8 gi|154149650|ref|YP_001403268.1| - 1.5e-14 53.7 6.2 7.1e-09 35.1 1.1 2.0 1 1 0 2 2 2 2 KaiC RecA PF00154.16 gi|154149650|ref|YP_001403268.1| - 0.01 14.9 0.1 0.026 13.5 0.0 1.7 2 0 0 2 2 2 1 recA bacterial DNA recombination protein GvpD PF07088.6 gi|154149650|ref|YP_001403268.1| - 0.027 12.8 0.4 0.089 11.0 0.1 1.7 2 0 0 2 2 2 0 GvpD gas vesicle protein PAXNEB PF05625.6 gi|154149650|ref|YP_001403268.1| - 0.045 12.5 0.6 0.95 8.2 0.1 2.0 2 0 0 2 2 2 0 PAXNEB protein FecCD PF01032.13 gi|154149651|ref|YP_001403269.1| - 0.023 13.5 0.5 0.027 13.2 0.4 1.2 1 0 0 1 1 1 0 FecCD transport family Bax1-I PF01027.15 gi|154149651|ref|YP_001403269.1| - 0.056 13.0 0.1 0.061 12.9 0.1 1.0 1 0 0 1 1 1 0 Inhibitor of apoptosis-promoting Bax1 DUF4277 PF14104.1 gi|154149651|ref|YP_001403269.1| - 0.13 12.4 0.1 0.19 11.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4277) Meth_synt_2 PF01717.13 gi|154149653|ref|YP_001403271.1| - 2.4e-59 200.9 0.5 7.9e-58 195.9 0.3 2.5 1 1 0 1 1 1 1 Cobalamin-independent synthase, Catalytic domain Meth_synt_1 PF08267.7 gi|154149653|ref|YP_001403271.1| - 9.9e-10 38.1 0.0 4.4e-09 36.0 0.0 1.8 2 0 0 2 2 2 1 Cobalamin-independent synthase, N-terminal domain URO-D PF01208.12 gi|154149653|ref|YP_001403271.1| - 0.00067 18.6 0.0 0.00091 18.2 0.0 1.3 1 0 0 1 1 1 1 Uroporphyrinogen decarboxylase (URO-D) tRNA-synt_2 PF00152.15 gi|154149654|ref|YP_001403272.1| - 1.7e-88 296.6 0.0 2.3e-88 296.2 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.20 gi|154149654|ref|YP_001403272.1| - 1.1e-14 54.0 0.3 1.9e-14 53.2 0.2 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.15 gi|154149654|ref|YP_001403272.1| - 0.0014 17.8 0.3 0.037 13.2 0.0 2.2 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) Herpes_gE PF02480.11 gi|154149655|ref|YP_001403273.1| - 0.085 11.1 0.0 0.097 10.9 0.0 1.1 1 0 0 1 1 1 0 Alphaherpesvirus glycoprotein E DUF3951 PF13131.1 gi|154149655|ref|YP_001403273.1| - 1.2 8.9 4.9 0.66 9.7 1.9 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3951) AMP-binding PF00501.23 gi|154149656|ref|YP_001403274.1| - 3.8e-17 61.7 0.0 5.2e-17 61.3 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme B12-binding PF02310.14 gi|154149657|ref|YP_001403275.1| - 4.9e-21 74.8 0.1 1.2e-20 73.5 0.0 1.7 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.12 gi|154149657|ref|YP_001403275.1| - 1.1e-10 41.3 0.1 2.5e-10 40.2 0.1 1.7 1 0 0 1 1 1 1 B12 binding domain PPK2 PF03976.9 gi|154149658|ref|YP_001403276.1| - 1.2e-61 207.9 0.2 2.5e-61 206.8 0.2 1.5 1 1 0 1 1 1 1 Polyphosphate kinase 2 (PPK2) MASE1 PF05231.9 gi|154149659|ref|YP_001403277.1| - 0.0014 17.7 29.6 0.0021 17.1 20.5 1.3 1 1 0 1 1 1 1 MASE1 RuvC PF02075.12 gi|154149660|ref|YP_001403278.1| - 5e-53 178.9 0.0 5.7e-53 178.7 0.0 1.0 1 0 0 1 1 1 1 Crossover junction endodeoxyribonuclease RuvC RuvA_N PF01330.16 gi|154149661|ref|YP_001403279.1| - 4.1e-17 61.7 0.1 8.6e-17 60.6 0.0 1.6 2 0 0 2 2 2 1 RuvA N terminal domain HHH_5 PF14520.1 gi|154149661|ref|YP_001403279.1| - 1.5e-09 37.8 2.4 1.1e-08 35.1 0.1 2.7 3 1 0 3 3 3 1 Helix-hairpin-helix domain RuvA_C PF07499.8 gi|154149661|ref|YP_001403279.1| - 4.4e-08 33.1 4.7 7.8e-08 32.3 3.2 1.4 1 0 0 1 1 1 1 RuvA, C-terminal domain 5_3_exonuc PF01367.15 gi|154149661|ref|YP_001403279.1| - 0.0027 17.8 0.4 1.2 9.4 0.0 2.4 1 1 1 2 2 2 2 5'-3' exonuclease, C-terminal SAM fold Transposase_20 PF02371.11 gi|154149661|ref|YP_001403279.1| - 0.015 15.3 0.1 2.7 8.1 0.0 2.5 2 0 0 2 2 2 0 Transposase IS116/IS110/IS902 family HHH PF00633.18 gi|154149661|ref|YP_001403279.1| - 0.017 14.8 1.1 2 8.2 0.1 2.9 2 0 0 2 2 2 0 Helix-hairpin-helix motif HHH_3 PF12836.2 gi|154149661|ref|YP_001403279.1| - 0.029 14.3 0.2 1.5 8.8 0.0 2.4 2 0 0 2 2 2 0 Helix-hairpin-helix motif DNA_pol_lambd_f PF10391.4 gi|154149661|ref|YP_001403279.1| - 0.042 13.3 0.0 0.52 9.9 0.0 2.4 2 0 0 2 2 2 0 Fingers domain of DNA polymerase lambda HHH_2 PF12826.2 gi|154149661|ref|YP_001403279.1| - 0.065 13.1 0.0 18 5.3 0.0 2.6 1 1 0 2 2 2 0 Helix-hairpin-helix motif RuvB_N PF05496.7 gi|154149662|ref|YP_001403280.1| - 4.2e-109 363.0 0.1 5.3e-109 362.7 0.1 1.1 1 0 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus RuvB_C PF05491.8 gi|154149662|ref|YP_001403280.1| - 1.8e-30 104.3 0.0 4.1e-30 103.2 0.0 1.6 1 0 0 1 1 1 1 Holliday junction DNA helicase ruvB C-terminus AAA PF00004.24 gi|154149662|ref|YP_001403280.1| - 8.4e-17 61.6 0.0 1.6e-16 60.7 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.9 gi|154149662|ref|YP_001403280.1| - 9e-10 38.4 0.1 1.1e-07 31.6 0.1 2.3 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) TIP49 PF06068.8 gi|154149662|ref|YP_001403280.1| - 9.7e-08 31.1 1.4 2.4e-05 23.2 0.0 2.7 3 1 0 3 3 3 2 TIP49 C-terminus Mg_chelatase PF01078.16 gi|154149662|ref|YP_001403280.1| - 1.8e-07 30.5 1.3 8.7e-05 21.7 0.1 3.1 1 1 2 3 3 3 1 Magnesium chelatase, subunit ChlI AAA_16 PF13191.1 gi|154149662|ref|YP_001403280.1| - 6.6e-05 22.9 0.0 0.00025 21.1 0.0 1.9 1 1 1 2 2 2 1 AAA ATPase domain Bac_DnaA PF00308.13 gi|154149662|ref|YP_001403280.1| - 0.00015 21.4 0.0 0.021 14.4 0.0 2.9 3 0 0 3 3 3 1 Bacterial dnaA protein AAA_22 PF13401.1 gi|154149662|ref|YP_001403280.1| - 0.00041 20.5 0.1 0.22 11.6 0.0 2.6 1 1 1 2 2 2 1 AAA domain AAA_19 PF13245.1 gi|154149662|ref|YP_001403280.1| - 0.00049 19.8 1.9 0.001 18.7 0.2 2.3 2 0 0 2 2 2 1 Part of AAA domain NTPase_1 PF03266.10 gi|154149662|ref|YP_001403280.1| - 0.00056 19.6 0.3 0.14 11.8 0.0 2.4 1 1 1 2 2 2 1 NTPase AAA_3 PF07726.6 gi|154149662|ref|YP_001403280.1| - 0.00087 18.9 0.0 0.04 13.5 0.0 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.21 gi|154149662|ref|YP_001403280.1| - 0.00092 18.7 0.0 0.43 10.0 0.0 2.2 1 1 1 2 2 2 2 Sigma-54 interaction domain RNA_helicase PF00910.17 gi|154149662|ref|YP_001403280.1| - 0.0028 17.8 0.0 0.0043 17.2 0.0 1.3 1 0 0 1 1 1 1 RNA helicase AAA_18 PF13238.1 gi|154149662|ref|YP_001403280.1| - 0.0028 17.9 0.0 0.0048 17.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|154149662|ref|YP_001403280.1| - 0.0037 18.0 0.0 0.0079 17.0 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_2 PF07724.9 gi|154149662|ref|YP_001403280.1| - 0.0038 17.1 0.0 0.024 14.5 0.0 2.0 1 1 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_10 PF12846.2 gi|154149662|ref|YP_001403280.1| - 0.0066 15.9 0.0 0.009 15.4 0.0 1.2 1 0 0 1 1 1 1 AAA-like domain DUF815 PF05673.8 gi|154149662|ref|YP_001403280.1| - 0.016 14.1 0.0 0.56 9.0 0.0 2.3 3 0 0 3 3 2 0 Protein of unknown function (DUF815) AAA_33 PF13671.1 gi|154149662|ref|YP_001403280.1| - 0.019 14.8 0.0 0.037 13.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.1 gi|154149662|ref|YP_001403280.1| - 0.024 14.5 0.0 0.052 13.4 0.0 1.5 1 1 0 1 1 1 0 AAA domain MobB PF03205.9 gi|154149662|ref|YP_001403280.1| - 0.024 14.3 0.0 0.24 11.0 0.0 2.5 2 1 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B Sigma54_activ_2 PF14532.1 gi|154149662|ref|YP_001403280.1| - 0.029 14.3 0.0 0.043 13.8 0.0 1.3 1 0 0 1 1 1 0 Sigma-54 interaction domain MCM PF00493.18 gi|154149662|ref|YP_001403280.1| - 0.033 12.9 0.1 0.17 10.6 0.0 1.9 1 1 0 1 1 1 0 MCM2/3/5 family Zeta_toxin PF06414.7 gi|154149662|ref|YP_001403280.1| - 0.035 13.1 0.1 0.065 12.3 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin Rad17 PF03215.10 gi|154149662|ref|YP_001403280.1| - 0.037 12.7 0.0 0.053 12.2 0.0 1.1 1 0 0 1 1 1 0 Rad17 cell cycle checkpoint protein AAA_32 PF13654.1 gi|154149662|ref|YP_001403280.1| - 0.04 12.5 0.0 0.055 12.1 0.0 1.1 1 0 0 1 1 1 0 AAA domain ResIII PF04851.10 gi|154149662|ref|YP_001403280.1| - 0.047 13.5 0.1 6.9 6.4 0.0 2.2 1 1 1 2 2 2 0 Type III restriction enzyme, res subunit NACHT PF05729.7 gi|154149662|ref|YP_001403280.1| - 0.052 13.1 0.0 0.16 11.6 0.0 1.8 2 0 0 2 2 2 0 NACHT domain AAA_25 PF13481.1 gi|154149662|ref|YP_001403280.1| - 0.065 12.6 0.0 0.13 11.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.22 gi|154149662|ref|YP_001403280.1| - 0.11 12.7 0.0 0.3 11.3 0.0 1.6 1 1 0 1 1 1 0 ABC transporter AAA_24 PF13479.1 gi|154149662|ref|YP_001403280.1| - 0.16 11.5 0.2 0.71 9.4 0.2 1.9 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.12 gi|154149662|ref|YP_001403280.1| - 0.16 11.3 2.0 0.35 10.2 0.2 2.3 2 1 0 2 2 2 0 IstB-like ATP binding protein DUF1211 PF06736.6 gi|154149663|ref|YP_001403281.1| - 6.6e-25 87.0 6.3 6.6e-25 87.0 4.3 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF1211) AA_permease_2 PF13520.1 gi|154149663|ref|YP_001403281.1| - 1.4 7.3 17.8 0.044 12.3 7.6 1.8 1 1 0 1 1 1 0 Amino acid permease HEAT_2 PF13646.1 gi|154149664|ref|YP_001403282.1| - 6.1e-73 241.1 12.3 1.4e-21 76.5 0.0 5.5 1 1 4 6 6 6 6 HEAT repeats HEAT_PBS PF03130.11 gi|154149664|ref|YP_001403282.1| - 1.5e-36 121.0 23.6 1.2e-07 31.5 0.0 11.5 12 0 0 12 12 12 9 PBS lyase HEAT-like repeat HEAT PF02985.17 gi|154149664|ref|YP_001403282.1| - 1.6e-36 121.0 0.6 0.0077 16.2 0.0 10.9 10 1 1 11 11 11 8 HEAT repeat HEAT_EZ PF13513.1 gi|154149664|ref|YP_001403282.1| - 6e-27 93.4 23.9 5.2e-05 23.6 0.0 10.3 7 3 3 10 10 10 7 HEAT-like repeat Arm PF00514.18 gi|154149664|ref|YP_001403282.1| - 1.2e-14 53.4 10.7 0.0041 16.8 0.0 9.5 4 4 6 10 10 10 3 Armadillo/beta-catenin-like repeat Adaptin_N PF01602.15 gi|154149664|ref|YP_001403282.1| - 4.6e-10 38.4 0.0 0.0058 15.0 0.0 3.5 2 1 1 3 3 3 3 Adaptin N terminal region Cnd1 PF12717.2 gi|154149664|ref|YP_001403282.1| - 9.3e-08 32.1 0.0 9.5 6.0 0.0 7.4 5 2 3 8 8 8 1 non-SMC mitotic condensation complex subunit 1 Aconitase_B_N PF11791.3 gi|154149664|ref|YP_001403282.1| - 1.4e-06 28.2 0.7 3.9 7.2 0.0 5.8 2 1 5 7 7 7 1 Aconitate B N-terminal domain GlutR_dimer PF00745.15 gi|154149664|ref|YP_001403282.1| - 0.00031 20.6 0.1 24 4.9 0.0 5.0 2 1 3 6 6 6 0 Glutamyl-tRNAGlu reductase, dimerisation domain Vac14_Fab1_bd PF12755.2 gi|154149664|ref|YP_001403282.1| - 0.0005 20.4 0.0 10 6.5 0.0 5.0 2 1 2 5 5 5 1 Vacuolar 14 Fab1-binding region ALF PF03752.8 gi|154149664|ref|YP_001403282.1| - 0.46 10.3 4.3 0.51 10.2 0.1 3.5 4 0 0 4 4 4 0 Short repeats of unknown function DUF3385 PF11865.3 gi|154149664|ref|YP_001403282.1| - 1.8 8.5 3.3 87 2.9 0.0 4.7 5 1 1 6 6 6 0 Domain of unknown function (DUF3385) PEGA PF08308.6 gi|154149665|ref|YP_001403283.1| - 1.2e-13 50.6 2.8 2.4e-13 49.6 0.1 3.0 3 1 0 3 3 3 1 PEGA domain CarboxypepD_reg PF13620.1 gi|154149665|ref|YP_001403283.1| - 0.0011 19.0 10.2 0.064 13.3 0.1 4.5 3 2 2 5 5 5 2 Carboxypeptidase regulatory-like domain DUF4480 PF13715.1 gi|154149665|ref|YP_001403283.1| - 0.1 12.6 0.2 0.86 9.7 0.0 2.6 3 1 0 3 3 3 0 Domain of unknown function (DUF4480) UPF0052 PF01933.13 gi|154149666|ref|YP_001403284.1| - 2.1e-48 165.1 0.1 3.2e-48 164.6 0.1 1.2 1 0 0 1 1 1 1 Uncharacterised protein family UPF0052 HD PF01966.17 gi|154149667|ref|YP_001403285.1| - 3e-12 46.6 0.4 7.2e-12 45.3 0.3 1.7 1 0 0 1 1 1 1 HD domain Flavoprotein PF02441.14 gi|154149670|ref|YP_001403288.1| - 5.1e-29 100.5 0.1 7.2e-29 100.0 0.0 1.2 1 0 0 1 1 1 1 Flavoprotein UbiD PF01977.11 gi|154149671|ref|YP_001403289.1| - 4.5e-111 371.1 1.9 5.4e-111 370.9 1.3 1.1 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DUF521 PF04412.8 gi|154149672|ref|YP_001403290.1| - 4.2e-147 489.8 0.1 4.7e-147 489.6 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF521) DUF3451 PF11933.3 gi|154149672|ref|YP_001403290.1| - 0.14 11.9 0.0 0.22 11.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3451) DUF1646 PF07854.7 gi|154149673|ref|YP_001403291.1| - 2.1e-135 451.3 28.1 2.4e-135 451.1 19.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1646) Caveolin PF01146.12 gi|154149673|ref|YP_001403291.1| - 1.9 8.0 5.0 5.6 6.5 3.5 1.8 1 0 0 1 1 1 0 Caveolin HEAT_2 PF13646.1 gi|154149674|ref|YP_001403292.1| - 1.1e-15 57.6 1.7 2.8e-09 37.1 0.0 2.4 1 1 1 2 2 2 2 HEAT repeats HEAT_PBS PF03130.11 gi|154149674|ref|YP_001403292.1| - 2.8e-09 36.5 5.4 0.00078 19.6 0.0 5.2 5 1 0 5 5 5 2 PBS lyase HEAT-like repeat HEAT PF02985.17 gi|154149674|ref|YP_001403292.1| - 0.00021 21.0 0.4 3.7 7.8 0.0 4.2 4 0 0 4 4 4 1 HEAT repeat HEAT_EZ PF13513.1 gi|154149674|ref|YP_001403292.1| - 0.00038 20.8 6.1 0.037 14.5 0.0 3.4 2 1 1 3 3 3 1 HEAT-like repeat Arm PF00514.18 gi|154149674|ref|YP_001403292.1| - 0.0016 18.2 0.0 21 5.1 0.0 3.9 3 1 1 4 4 4 2 Armadillo/beta-catenin-like repeat PolC_DP2 PF03833.8 gi|154149675|ref|YP_001403293.1| - 0 1161.6 0.0 0 1160.7 0.0 1.4 1 1 0 1 1 1 1 DNA polymerase II large subunit DP2 VWA_2 PF13519.1 gi|154149676|ref|YP_001403294.1| - 1.1e-12 48.3 0.3 7.3e-10 39.2 0.0 2.7 2 0 0 2 2 2 2 von Willebrand factor type A domain Big_1 PF02369.11 gi|154149676|ref|YP_001403294.1| - 1e-09 38.2 37.0 2.4e-06 27.3 2.5 6.2 5 1 0 5 5 5 3 Bacterial Ig-like domain (group 1) VWA PF00092.23 gi|154149676|ref|YP_001403294.1| - 5.4e-08 32.7 0.3 0.0016 18.2 0.1 3.5 3 0 0 3 3 3 2 von Willebrand factor type A domain DUF824 PF05688.6 gi|154149676|ref|YP_001403294.1| - 0.0038 16.8 0.2 0.0038 16.8 0.1 3.8 4 0 0 4 4 4 1 Salmonella repeat of unknown function (DUF824) DUF1897 PF09005.5 gi|154149677|ref|YP_001403295.1| - 0.074 12.5 0.1 0.15 11.4 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1897) DUF1628 PF07790.6 gi|154149678|ref|YP_001403296.1| - 0.059 14.1 1.0 0.11 13.2 0.7 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1628) Attachment_P66 PF11263.3 gi|154149680|ref|YP_001403298.1| - 0.027 13.4 0.0 0.037 13.0 0.0 1.1 1 0 0 1 1 1 0 Borrelia burgdorferi attachment protein P66 Surf_Ag_VNR PF07244.10 gi|154149680|ref|YP_001403298.1| - 0.058 13.8 0.1 0.098 13.0 0.1 1.4 1 0 0 1 1 1 0 Surface antigen variable number repeat HisG PF01634.13 gi|154149683|ref|YP_001403301.1| - 1.3e-38 132.1 0.0 1.7e-38 131.7 0.0 1.2 1 0 0 1 1 1 1 ATP phosphoribosyltransferase HisG_C PF08029.6 gi|154149683|ref|YP_001403301.1| - 3.9e-22 77.9 0.2 9.1e-22 76.8 0.1 1.7 1 0 0 1 1 1 1 HisG, C-terminal domain DUF1015 PF06245.6 gi|154149684|ref|YP_001403302.1| - 1.2e-122 409.4 0.0 1.3e-122 409.2 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1015) ParBc PF02195.13 gi|154149684|ref|YP_001403302.1| - 0.075 13.1 0.1 0.19 11.8 0.0 1.6 1 0 0 1 1 1 0 ParB-like nuclease domain Acetyltransf_1 PF00583.19 gi|154149685|ref|YP_001403303.1| - 5.4e-15 55.1 0.3 7.3e-15 54.7 0.2 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.1 gi|154149685|ref|YP_001403303.1| - 1.1e-12 48.0 0.0 1.4e-12 47.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.1 gi|154149685|ref|YP_001403303.1| - 2.1e-09 37.4 0.1 3e-09 36.9 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|154149685|ref|YP_001403303.1| - 1.3e-07 31.2 0.0 2e-07 30.6 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_8 PF13523.1 gi|154149685|ref|YP_001403303.1| - 6.7e-05 22.8 0.1 0.00026 20.9 0.1 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|154149685|ref|YP_001403303.1| - 8.2e-05 22.4 0.0 0.00034 20.4 0.0 1.9 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|154149685|ref|YP_001403303.1| - 0.0049 16.8 0.0 0.0069 16.3 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.1 gi|154149685|ref|YP_001403303.1| - 0.068 13.3 0.0 0.61 10.2 0.0 2.0 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain HMG-CoA_red PF00368.13 gi|154149686|ref|YP_001403304.1| - 8.8e-139 462.2 13.6 1e-138 462.1 9.5 1.0 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A reductase vWF_A PF12450.3 gi|154149686|ref|YP_001403304.1| - 0.018 14.7 0.1 0.26 11.0 0.0 2.1 1 1 1 2 2 2 0 von Willebrand factor Met_10 PF02475.11 gi|154149687|ref|YP_001403305.1| - 5.5e-45 153.4 0.0 7.3e-45 153.0 0.0 1.1 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_26 PF13659.1 gi|154149687|ref|YP_001403305.1| - 5.1e-11 42.6 0.4 4.1e-10 39.7 0.1 2.2 2 0 0 2 2 2 1 Methyltransferase domain MTS PF05175.9 gi|154149687|ref|YP_001403305.1| - 7.1e-07 28.7 0.0 2.5e-06 26.9 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_18 PF12847.2 gi|154149687|ref|YP_001403305.1| - 1.1e-05 25.9 0.0 2.2e-05 25.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.10 gi|154149687|ref|YP_001403305.1| - 2.7e-05 23.6 0.0 4.4e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_31 PF13847.1 gi|154149687|ref|YP_001403305.1| - 4.5e-05 23.0 0.0 6.4e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.8 gi|154149687|ref|YP_001403305.1| - 0.0027 16.9 0.0 0.0036 16.4 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_11 PF08241.7 gi|154149687|ref|YP_001403305.1| - 0.0039 17.6 0.0 0.015 15.7 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|154149687|ref|YP_001403305.1| - 0.0071 16.0 0.0 0.018 14.7 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.5 gi|154149687|ref|YP_001403305.1| - 0.011 15.3 0.0 0.014 14.9 0.0 1.2 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase ADH_zinc_N PF00107.21 gi|154149687|ref|YP_001403305.1| - 0.019 14.4 0.0 0.43 10.1 0.0 2.6 2 1 0 2 2 2 0 Zinc-binding dehydrogenase Nol1_Nop2_Fmu PF01189.12 gi|154149687|ref|YP_001403305.1| - 0.038 13.3 0.0 0.1 11.9 0.0 1.6 1 1 1 2 2 2 0 NOL1/NOP2/sun family tRNA_U5-meth_tr PF05958.6 gi|154149687|ref|YP_001403305.1| - 0.054 12.1 0.0 0.075 11.7 0.0 1.2 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase Methyltransf_4 PF02390.12 gi|154149687|ref|YP_001403305.1| - 0.074 12.0 0.0 0.21 10.6 0.0 1.7 1 1 0 1 1 1 0 Putative methyltransferase DUF1406 PF07190.6 gi|154149688|ref|YP_001403306.1| - 0.074 12.7 0.1 0.08 12.6 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1406) NLE PF08154.7 gi|154149688|ref|YP_001403306.1| - 0.1 12.6 0.0 0.18 11.8 0.0 1.4 1 0 0 1 1 1 0 NLE (NUC135) domain eIF-1a PF01176.14 gi|154149689|ref|YP_001403307.1| - 2.4e-20 71.7 0.3 3.5e-20 71.1 0.2 1.2 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 PsiE PF06146.7 gi|154149690|ref|YP_001403308.1| - 8.8e-17 61.1 8.5 1.8e-16 60.1 5.9 1.5 1 0 0 1 1 1 1 Phosphate-starvation-inducible E RseC_MucC PF04246.7 gi|154149690|ref|YP_001403308.1| - 2.3 7.7 5.0 1.6 8.3 0.8 2.2 1 1 1 2 2 2 0 Positive regulator of sigma(E), RseC/MucC TMCO5 PF14992.1 gi|154149690|ref|YP_001403308.1| - 3.6 6.6 4.4 2.1 7.3 1.8 1.4 1 1 1 2 2 2 0 TMCO5 family Tetraspannin PF00335.15 gi|154149690|ref|YP_001403308.1| - 3.6 6.7 14.4 0.82 8.9 7.1 1.7 1 1 1 2 2 2 0 Tetraspanin family DUF4229 PF14012.1 gi|154149690|ref|YP_001403308.1| - 3.8 7.4 14.2 0.089 12.7 1.3 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF4229) EssA PF10661.4 gi|154149690|ref|YP_001403308.1| - 8.9 5.9 5.6 6.5 6.4 0.0 2.5 3 0 0 3 3 3 0 WXG100 protein secretion system (Wss), protein EssA MarR_2 PF12802.2 gi|154149691|ref|YP_001403309.1| - 5.1e-10 38.8 0.4 8.1e-09 35.0 0.0 2.3 3 0 0 3 3 3 1 MarR family MarR PF01047.17 gi|154149691|ref|YP_001403309.1| - 5.7e-10 38.7 0.0 1.4e-09 37.5 0.0 1.7 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.1 gi|154149691|ref|YP_001403309.1| - 4e-09 36.6 0.1 2.2e-08 34.2 0.0 2.0 2 0 0 2 2 2 1 Winged helix DNA-binding domain Fe_dep_repress PF01325.14 gi|154149691|ref|YP_001403309.1| - 2.7e-06 27.2 0.1 9.3e-06 25.5 0.0 1.9 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain HTH_24 PF13412.1 gi|154149691|ref|YP_001403309.1| - 1.3e-05 24.4 0.1 0.00018 20.8 0.0 2.8 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding KIP1 PF07765.7 gi|154149691|ref|YP_001403309.1| - 0.0028 17.4 0.0 0.0067 16.2 0.0 1.6 2 0 0 2 2 2 1 KIP1-like protein HTH_IclR PF09339.5 gi|154149691|ref|YP_001403309.1| - 0.0063 16.0 0.0 0.029 13.9 0.0 2.1 2 1 0 2 2 2 1 IclR helix-turn-helix domain HTH_AsnC-type PF13404.1 gi|154149691|ref|YP_001403309.1| - 0.01 15.3 0.2 0.38 10.3 0.0 3.2 3 1 0 3 3 3 0 AsnC-type helix-turn-helix domain HTH_1 PF00126.22 gi|154149691|ref|YP_001403309.1| - 0.026 14.2 0.3 0.63 9.8 0.0 2.7 2 1 0 2 2 2 0 Bacterial regulatory helix-turn-helix protein, lysR family SieB PF14163.1 gi|154149691|ref|YP_001403309.1| - 0.042 13.4 0.4 0.081 12.4 0.3 1.5 1 0 0 1 1 1 0 Superinfection exclusion protein B HTH_Tnp_ISL3 PF13542.1 gi|154149691|ref|YP_001403309.1| - 0.051 12.7 0.0 0.25 10.5 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 TrmB PF01978.14 gi|154149691|ref|YP_001403309.1| - 0.12 12.1 0.0 0.24 11.1 0.0 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Rrf2 PF02082.15 gi|154149691|ref|YP_001403309.1| - 0.13 12.4 0.1 0.41 10.7 0.0 1.8 2 0 0 2 2 2 0 Transcriptional regulator Lon_C PF05362.8 gi|154149692|ref|YP_001403310.1| - 3.3e-85 284.5 0.9 5.9e-85 283.7 0.6 1.4 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain AAA PF00004.24 gi|154149692|ref|YP_001403310.1| - 8e-23 81.0 0.0 2.3e-22 79.6 0.0 1.8 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) LON PF02190.11 gi|154149692|ref|YP_001403310.1| - 2.6e-12 46.8 0.0 6.2e-12 45.6 0.0 1.6 1 0 0 1 1 1 1 ATP-dependent protease La (LON) domain ChlI PF13541.1 gi|154149692|ref|YP_001403310.1| - 8.9e-12 44.5 0.0 1.9e-11 43.5 0.0 1.6 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase AAA_5 PF07728.9 gi|154149692|ref|YP_001403310.1| - 1.1e-09 38.1 0.0 1.1e-08 34.9 0.0 2.4 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_17 PF13207.1 gi|154149692|ref|YP_001403310.1| - 5.6e-06 27.1 1.4 0.00015 22.6 0.1 3.3 3 1 0 3 3 2 1 AAA domain RuvB_N PF05496.7 gi|154149692|ref|YP_001403310.1| - 2.2e-05 23.6 0.1 0.0001 21.4 0.0 2.0 2 0 0 2 2 2 1 Holliday junction DNA helicase ruvB N-terminus AAA_33 PF13671.1 gi|154149692|ref|YP_001403310.1| - 2.8e-05 23.9 0.1 0.00046 20.0 0.0 2.5 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.1 gi|154149692|ref|YP_001403310.1| - 3.4e-05 23.9 0.1 0.00013 22.0 0.0 2.1 1 1 0 1 1 1 1 AAA ATPase domain AAA_2 PF07724.9 gi|154149692|ref|YP_001403310.1| - 6e-05 23.0 0.0 0.00017 21.5 0.0 1.7 1 1 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.1 gi|154149692|ref|YP_001403310.1| - 0.00011 22.3 0.0 0.0012 18.9 0.0 2.5 1 1 0 1 1 1 1 AAA domain TIP49 PF06068.8 gi|154149692|ref|YP_001403310.1| - 0.00014 20.6 0.3 0.0057 15.4 0.0 2.2 2 0 0 2 2 2 1 TIP49 C-terminus Birna_VP4 PF01768.11 gi|154149692|ref|YP_001403310.1| - 0.00029 19.9 0.2 0.00059 18.9 0.2 1.4 1 0 0 1 1 1 1 Birnavirus VP4 protein IstB_IS21 PF01695.12 gi|154149692|ref|YP_001403310.1| - 0.00062 19.2 0.0 0.0014 18.0 0.0 1.6 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_PrkA PF08298.6 gi|154149692|ref|YP_001403310.1| - 0.00077 18.2 0.0 0.0013 17.4 0.0 1.2 1 0 0 1 1 1 1 PrkA AAA domain Zeta_toxin PF06414.7 gi|154149692|ref|YP_001403310.1| - 0.0013 17.9 0.3 0.0054 15.8 0.0 2.0 2 0 0 2 2 2 1 Zeta toxin UPF0079 PF02367.12 gi|154149692|ref|YP_001403310.1| - 0.0029 17.2 0.9 0.02 14.5 0.0 2.3 2 0 0 2 2 2 1 Uncharacterised P-loop hydrolase UPF0079 Rad17 PF03215.10 gi|154149692|ref|YP_001403310.1| - 0.0077 14.9 0.0 0.013 14.2 0.0 1.2 1 0 0 1 1 1 1 Rad17 cell cycle checkpoint protein Viral_helicase1 PF01443.13 gi|154149692|ref|YP_001403310.1| - 0.008 15.7 0.0 0.014 14.9 0.0 1.4 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase AAA_19 PF13245.1 gi|154149692|ref|YP_001403310.1| - 0.0089 15.7 0.9 0.041 13.6 0.1 2.5 2 0 0 2 2 2 1 Part of AAA domain AAA_3 PF07726.6 gi|154149692|ref|YP_001403310.1| - 0.012 15.2 0.0 0.052 13.1 0.0 2.1 2 1 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.1 gi|154149692|ref|YP_001403310.1| - 0.014 15.6 8.1 0.016 15.4 0.1 3.6 4 1 0 4 4 3 0 AAA domain AAA_25 PF13481.1 gi|154149692|ref|YP_001403310.1| - 0.022 14.1 0.0 0.051 12.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.10 gi|154149692|ref|YP_001403310.1| - 0.031 14.0 1.6 0.46 10.1 0.1 3.3 2 1 2 4 4 4 0 NTPase AAA_14 PF13173.1 gi|154149692|ref|YP_001403310.1| - 0.045 13.6 0.0 0.096 12.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain SKI PF01202.17 gi|154149692|ref|YP_001403310.1| - 0.045 13.6 0.4 0.17 11.7 0.1 2.1 2 0 0 2 2 2 0 Shikimate kinase AAA_30 PF13604.1 gi|154149692|ref|YP_001403310.1| - 0.054 13.0 0.5 0.13 11.8 0.1 1.8 2 0 0 2 2 1 0 AAA domain RNA_helicase PF00910.17 gi|154149692|ref|YP_001403310.1| - 0.056 13.6 0.0 0.19 11.9 0.0 1.9 2 0 0 2 2 1 0 RNA helicase AAA_24 PF13479.1 gi|154149692|ref|YP_001403310.1| - 0.092 12.3 0.3 0.2 11.2 0.2 1.6 1 0 0 1 1 1 0 AAA domain DUF815 PF05673.8 gi|154149692|ref|YP_001403310.1| - 0.13 11.1 0.0 0.29 10.0 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF815) NACHT PF05729.7 gi|154149692|ref|YP_001403310.1| - 0.14 11.8 0.0 1.4 8.5 0.0 2.3 2 0 0 2 2 2 0 NACHT domain Parvo_NS1 PF01057.12 gi|154149692|ref|YP_001403310.1| - 0.16 10.8 0.0 0.27 10.0 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 Torsin PF06309.6 gi|154149692|ref|YP_001403310.1| - 0.2 11.5 0.0 0.61 9.9 0.0 1.8 1 0 0 1 1 1 0 Torsin AAA_11 PF13086.1 gi|154149692|ref|YP_001403310.1| - 0.21 11.1 0.1 0.74 9.3 0.0 1.8 1 1 1 2 2 2 0 AAA domain OKR_DC_1 PF01276.15 gi|154149693|ref|YP_001403311.1| - 3.4e-165 549.6 0.0 4.2e-165 549.3 0.0 1.1 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain OKR_DC_1_C PF03711.10 gi|154149693|ref|YP_001403311.1| - 4.2e-38 130.5 0.0 8.9e-38 129.4 0.0 1.5 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, C-terminal domain OKR_DC_1_N PF03709.10 gi|154149693|ref|YP_001403311.1| - 2.4e-29 101.6 0.1 4.7e-29 100.7 0.0 1.5 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, N-terminal domain Beta_elim_lyase PF01212.16 gi|154149693|ref|YP_001403311.1| - 0.0057 15.8 0.0 0.011 14.9 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase AA_permease_2 PF13520.1 gi|154149694|ref|YP_001403312.1| - 2e-58 197.9 58.1 2.5e-58 197.6 40.3 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.16 gi|154149694|ref|YP_001403312.1| - 9.7e-20 70.3 47.1 1.4e-19 69.8 32.6 1.1 1 0 0 1 1 1 1 Amino acid permease ADP_ribosyl_GH PF03747.9 gi|154149694|ref|YP_001403312.1| - 0.085 12.6 0.1 0.13 12.0 0.1 1.2 1 0 0 1 1 1 0 ADP-ribosylglycohydrolase DUF161 PF02588.10 gi|154149696|ref|YP_001403314.1| - 4.8e-10 39.5 27.4 1.2e-06 28.6 7.1 2.7 2 2 0 2 2 2 2 Uncharacterized BCR, YitT family COG1284 Amidase02_C PF12123.3 gi|154149696|ref|YP_001403314.1| - 0.15 11.7 0.0 0.27 10.9 0.0 1.4 1 0 0 1 1 1 0 N-acetylmuramoyl-l-alanine amidase DUF2371 PF10177.4 gi|154149696|ref|YP_001403314.1| - 1.8 8.4 5.6 2.7 7.8 0.2 2.4 2 0 0 2 2 2 0 Uncharacterised conserved protein (DUF2371) Abhydrolase_6 PF12697.2 gi|154149697|ref|YP_001403315.1| - 9.9e-37 127.0 0.5 1.1e-36 126.8 0.4 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.15 gi|154149697|ref|YP_001403315.1| - 2.8e-23 82.6 0.0 1.4e-14 54.2 0.0 2.1 1 1 1 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_5 PF12695.2 gi|154149697|ref|YP_001403315.1| - 6.2e-18 64.9 0.0 1.9e-17 63.3 0.0 1.7 1 1 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_4 PF08386.5 gi|154149697|ref|YP_001403315.1| - 1.7e-05 24.6 0.0 2.9e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 TAP-like protein FSH1 PF03959.8 gi|154149697|ref|YP_001403315.1| - 0.00019 20.9 0.0 0.0012 18.2 0.0 1.9 1 1 0 1 1 1 1 Serine hydrolase (FSH1) Hydrolase_4 PF12146.3 gi|154149697|ref|YP_001403315.1| - 0.0039 17.0 0.0 0.0079 16.0 0.0 1.6 1 0 0 1 1 1 1 Putative lysophospholipase Peptidase_S9 PF00326.16 gi|154149697|ref|YP_001403315.1| - 0.0058 15.8 0.0 0.032 13.4 0.0 2.0 2 0 0 2 2 2 1 Prolyl oligopeptidase family DLH PF01738.13 gi|154149697|ref|YP_001403315.1| - 0.041 13.1 0.0 0.19 10.9 0.0 1.8 2 0 0 2 2 2 0 Dienelactone hydrolase family Esterase_phd PF10503.4 gi|154149697|ref|YP_001403315.1| - 0.046 12.9 0.0 3.6 6.7 0.0 2.3 1 1 0 2 2 2 0 Esterase PHB depolymerase Ndr PF03096.9 gi|154149697|ref|YP_001403315.1| - 0.13 10.7 0.0 0.17 10.3 0.0 1.1 1 0 0 1 1 1 0 Ndr family Phage_Gp23 PF10669.4 gi|154149698|ref|YP_001403316.1| - 0.096 12.7 0.2 0.23 11.5 0.0 1.8 2 0 0 2 2 2 0 Protein gp23 (Bacteriophage A118) DUF2910 PF11139.3 gi|154149698|ref|YP_001403316.1| - 0.3 10.1 7.8 0.043 12.9 0.6 2.5 1 1 2 3 3 3 0 Protein of unknown function (DUF2910) DUF2231 PF09990.4 gi|154149698|ref|YP_001403316.1| - 1.2 9.5 8.2 3.9 7.8 0.0 3.0 3 0 0 3 3 3 0 Predicted membrane protein (DUF2231) FA_desaturase PF00487.19 gi|154149698|ref|YP_001403316.1| - 1.7 7.9 4.0 1.8 7.9 0.6 1.9 2 0 0 2 2 2 0 Fatty acid desaturase Inhibitor_I42 PF09394.5 gi|154149699|ref|YP_001403317.1| - 0.013 15.8 0.1 0.41 10.9 0.0 2.9 2 0 0 2 2 2 0 Chagasin family peptidase inhibitor I42 DUF4551 PF15087.1 gi|154149699|ref|YP_001403317.1| - 0.17 10.2 0.0 0.23 9.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) YcfA PF07927.7 gi|154149700|ref|YP_001403318.1| - 9.5e-13 47.8 0.0 1.5e-12 47.2 0.0 1.3 1 0 0 1 1 1 1 YcfA-like protein UPF0150 PF03681.10 gi|154149701|ref|YP_001403319.1| - 2.1e-17 62.4 0.3 2.7e-17 62.1 0.2 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0150) DUF3832 PF12909.2 gi|154149701|ref|YP_001403319.1| - 0.034 14.2 0.1 0.038 14.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3832) SHNi-TPR PF10516.4 gi|154149701|ref|YP_001403319.1| - 0.062 12.5 0.1 0.094 11.9 0.1 1.2 1 0 0 1 1 1 0 SHNi-TPR Myco_arth_vir_N PF09610.5 gi|154149701|ref|YP_001403319.1| - 0.13 12.2 0.3 0.21 11.5 0.2 1.3 1 0 0 1 1 1 0 Mycoplasma virulence signal region (Myco_arth_vir_N) Mrr_cat PF04471.7 gi|154149702|ref|YP_001403320.1| - 1.2e-30 105.6 1.3 6.4e-30 103.3 0.0 2.2 2 0 0 2 2 2 1 Restriction endonuclease DZR PF12773.2 gi|154149702|ref|YP_001403320.1| - 0.0024 17.6 3.8 0.0024 17.6 2.6 1.6 2 0 0 2 2 2 1 Double zinc ribbon DUF2034 PF10356.4 gi|154149702|ref|YP_001403320.1| - 0.006 15.7 0.7 0.006 15.7 0.5 2.5 2 1 1 3 3 3 1 Protein of unknown function (DUF2034) Hjc PF01870.13 gi|154149702|ref|YP_001403320.1| - 0.049 13.2 0.7 0.21 11.1 0.0 2.2 2 0 0 2 2 2 0 Archaeal holliday junction resolvase (hjc) UL97 PF06734.7 gi|154149702|ref|YP_001403320.1| - 0.076 12.3 0.3 0.15 11.3 0.2 1.5 1 0 0 1 1 1 0 UL97 DUF3279 PF11682.3 gi|154149702|ref|YP_001403320.1| - 0.083 12.4 8.8 0.16 11.5 5.7 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3279) zf-DHHC PF01529.15 gi|154149702|ref|YP_001403320.1| - 0.25 10.7 8.9 0.49 9.7 5.9 1.5 1 1 0 1 1 1 0 DHHC palmitoyltransferase Zn-ribbon_8 PF09723.5 gi|154149702|ref|YP_001403320.1| - 0.26 11.2 0.1 0.26 11.2 0.1 2.6 2 1 1 3 3 3 0 Zinc ribbon domain Laminin_II PF06009.7 gi|154149702|ref|YP_001403320.1| - 0.31 10.7 9.4 0.84 9.3 1.0 2.3 2 0 0 2 2 2 0 Laminin Domain II zinc_ribbon_2 PF13240.1 gi|154149702|ref|YP_001403320.1| - 1.4 8.5 11.9 2.6 7.6 0.9 3.2 3 0 0 3 3 3 0 zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|154149702|ref|YP_001403320.1| - 1.5 8.1 4.4 11 5.4 3.2 2.1 1 1 1 2 2 2 0 zinc-ribbon domain IncA PF04156.9 gi|154149702|ref|YP_001403320.1| - 2.4 7.7 11.8 4.4 6.8 0.5 2.2 2 0 0 2 2 2 0 IncA protein ATP-synt_E PF05680.7 gi|154149702|ref|YP_001403320.1| - 5.2 7.0 8.7 13 5.8 6.1 1.7 1 0 0 1 1 1 0 ATP synthase E chain DUF35 PF01796.12 gi|154149703|ref|YP_001403321.1| - 8.7e-18 64.3 0.1 1.2e-17 63.9 0.0 1.2 1 0 0 1 1 1 1 DUF35 OB-fold domain DUF35_N PF12172.3 gi|154149703|ref|YP_001403321.1| - 2.9e-10 39.7 3.8 4.2e-10 39.2 2.6 1.3 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) DZR PF12773.2 gi|154149703|ref|YP_001403321.1| - 0.012 15.4 1.7 0.019 14.8 1.2 1.2 1 0 0 1 1 1 0 Double zinc ribbon DUF953 PF06110.6 gi|154149703|ref|YP_001403321.1| - 0.042 13.3 0.0 0.066 12.6 0.0 1.3 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) zf-C2HC_2 PF13913.1 gi|154149703|ref|YP_001403321.1| - 0.051 13.2 2.7 0.051 13.2 1.9 2.1 1 1 1 2 2 2 0 zinc-finger of a C2HC-type zinc_ribbon_5 PF13719.1 gi|154149703|ref|YP_001403321.1| - 0.14 11.7 2.1 5.1 6.7 0.0 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Auto_anti-p27 PF06677.7 gi|154149703|ref|YP_001403321.1| - 0.39 10.5 3.1 0.85 9.4 2.2 1.5 1 1 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-C2H2 PF00096.21 gi|154149703|ref|YP_001403321.1| - 6.8 7.2 6.4 8.3 6.9 1.0 2.4 1 1 1 2 2 2 0 Zinc finger, C2H2 type Thiolase_C PF02803.13 gi|154149704|ref|YP_001403322.1| - 3.1e-11 42.7 2.0 3.1e-11 42.7 1.4 2.5 2 2 0 2 2 2 1 Thiolase, C-terminal domain Thiolase_N PF00108.18 gi|154149704|ref|YP_001403322.1| - 3.2e-11 42.7 1.5 6e-10 38.5 0.2 2.2 2 0 0 2 2 2 2 Thiolase, N-terminal domain ketoacyl-synt PF00109.21 gi|154149704|ref|YP_001403322.1| - 0.00047 19.7 2.4 0.00047 19.7 1.7 3.0 1 1 2 3 3 3 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III PF08545.5 gi|154149704|ref|YP_001403322.1| - 0.21 11.2 2.4 5.9 6.6 0.4 2.4 2 0 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ACP_syn_III_C PF08541.5 gi|154149705|ref|YP_001403323.1| - 5.1e-10 39.2 0.0 1e-09 38.2 0.0 1.5 1 0 0 1 1 1 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HMG_CoA_synt_N PF01154.12 gi|154149705|ref|YP_001403323.1| - 3e-07 30.1 0.1 4.1e-07 29.7 0.1 1.2 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase N terminal ACP_syn_III PF08545.5 gi|154149705|ref|YP_001403323.1| - 0.00036 20.1 0.5 0.00036 20.1 0.4 2.1 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HMG_CoA_synt_C PF08540.5 gi|154149705|ref|YP_001403323.1| - 0.011 15.2 0.0 0.12 11.7 0.0 1.9 1 1 1 2 2 2 0 Hydroxymethylglutaryl-coenzyme A synthase C terminal HTH_3 PF01381.17 gi|154149706|ref|YP_001403324.1| - 5.9e-06 26.0 0.0 1.8e-05 24.5 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix HTH_31 PF13560.1 gi|154149706|ref|YP_001403324.1| - 0.00065 19.8 0.0 0.0013 18.8 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.2 gi|154149706|ref|YP_001403324.1| - 0.011 15.8 0.0 0.031 14.3 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain CTP-dep_RFKase PF01982.11 gi|154149707|ref|YP_001403325.1| - 2.5e-46 156.2 0.0 3.5e-46 155.7 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF120 MarR PF01047.17 gi|154149707|ref|YP_001403325.1| - 0.00064 19.3 0.0 0.001 18.7 0.0 1.3 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.2 gi|154149707|ref|YP_001403325.1| - 0.00089 18.8 0.0 0.0025 17.4 0.0 1.7 2 0 0 2 2 2 1 MarR family HTH_Crp_2 PF13545.1 gi|154149707|ref|YP_001403325.1| - 0.0012 18.6 0.0 0.0019 17.9 0.0 1.3 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_20 PF12840.2 gi|154149707|ref|YP_001403325.1| - 0.011 15.5 0.0 0.046 13.5 0.0 2.0 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_24 PF13412.1 gi|154149707|ref|YP_001403325.1| - 0.012 15.0 0.0 0.018 14.3 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_11 PF08279.7 gi|154149707|ref|YP_001403325.1| - 0.012 15.1 0.0 0.025 14.2 0.0 1.4 1 0 0 1 1 1 0 HTH domain HTH_AsnC-type PF13404.1 gi|154149707|ref|YP_001403325.1| - 0.018 14.6 0.0 0.031 13.7 0.0 1.4 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_27 PF13463.1 gi|154149707|ref|YP_001403325.1| - 0.024 14.9 0.0 0.037 14.3 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_DeoR PF08220.7 gi|154149707|ref|YP_001403325.1| - 0.047 13.2 0.0 0.083 12.4 0.0 1.3 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_1 PF00126.22 gi|154149707|ref|YP_001403325.1| - 0.07 12.8 0.3 0.16 11.7 0.2 1.6 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family DHBP_synthase PF00926.14 gi|154149708|ref|YP_001403326.1| - 8.5e-63 211.0 0.0 9.7e-63 210.9 0.0 1.0 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase DUF1888 PF08985.6 gi|154149708|ref|YP_001403326.1| - 0.017 14.7 0.0 0.12 12.0 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1888) PAS_9 PF13426.1 gi|154149709|ref|YP_001403327.1| - 2.8e-57 191.5 0.0 7.7e-13 48.7 0.0 6.3 7 0 0 7 7 6 5 PAS domain PAS_4 PF08448.5 gi|154149709|ref|YP_001403327.1| - 2e-43 146.8 3.5 3e-10 40.1 0.0 7.1 6 2 1 7 7 7 5 PAS fold PAS PF00989.19 gi|154149709|ref|YP_001403327.1| - 6e-40 135.5 0.1 1.3e-12 47.4 0.0 6.3 5 2 0 5 5 5 4 PAS fold PAS_8 PF13188.1 gi|154149709|ref|YP_001403327.1| - 6.9e-25 86.0 0.1 0.00012 21.8 0.0 5.4 5 0 0 5 5 5 4 PAS domain PAS_3 PF08447.6 gi|154149709|ref|YP_001403327.1| - 9.3e-23 80.1 0.0 1.3e-08 34.7 0.0 5.6 6 0 0 6 6 6 3 PAS fold Response_reg PF00072.19 gi|154149709|ref|YP_001403327.1| - 9.3e-18 64.2 0.0 3.8e-17 62.3 0.0 2.1 2 0 0 2 2 2 1 Response regulator receiver domain HATPase_c PF02518.21 gi|154149709|ref|YP_001403327.1| - 1.6e-13 50.3 0.2 4.3e-13 48.9 0.1 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_7 PF12860.2 gi|154149709|ref|YP_001403327.1| - 1.1e-12 47.9 6.3 1.3e-08 34.8 0.0 4.8 6 1 0 6 6 4 2 PAS fold PAS_10 PF13596.1 gi|154149709|ref|YP_001403327.1| - 2.8e-06 27.5 0.0 2.1 8.6 0.0 4.5 4 0 0 4 4 4 1 PAS domain PAS_11 PF14598.1 gi|154149709|ref|YP_001403327.1| - 0.0097 15.8 0.0 6.1 6.8 0.0 3.6 4 0 0 4 4 3 1 PAS domain SPOB_a PF14689.1 gi|154149709|ref|YP_001403327.1| - 0.028 13.9 0.4 0.11 12.0 0.0 2.2 2 0 0 2 2 2 0 Sensor_kinase_SpoOB-type, alpha-helical domain HATPase_c_5 PF14501.1 gi|154149709|ref|YP_001403327.1| - 0.03 14.0 0.0 0.07 12.8 0.0 1.6 1 0 0 1 1 1 0 GHKL domain DivIC PF04977.10 gi|154149709|ref|YP_001403327.1| - 0.14 11.6 2.8 0.51 9.8 1.5 2.3 1 1 0 1 1 1 0 Septum formation initiator APG6 PF04111.7 gi|154149709|ref|YP_001403327.1| - 0.29 10.1 4.6 0.56 9.2 3.2 1.4 1 0 0 1 1 1 0 Autophagy protein Apg6 zf-C4H2 PF10146.4 gi|154149709|ref|YP_001403327.1| - 0.41 10.6 2.9 0.99 9.3 2.0 1.5 1 0 0 1 1 1 0 Zinc finger-containing protein V_ATPase_I PF01496.14 gi|154149709|ref|YP_001403327.1| - 0.48 8.2 0.3 0.85 7.3 0.2 1.3 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Peptidase_M24 PF00557.19 gi|154149710|ref|YP_001403328.1| - 7.7e-34 117.0 0.0 1.1e-33 116.5 0.0 1.3 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.13 gi|154149710|ref|YP_001403328.1| - 3.2e-07 30.9 0.0 5.8e-07 30.0 0.0 1.4 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain BPD_transp_1 PF00528.17 gi|154149711|ref|YP_001403329.1| - 3.2e-20 72.4 14.8 3.2e-20 72.4 10.2 2.5 2 1 1 3 3 3 1 Binding-protein-dependent transport system inner membrane component FtsX PF02687.16 gi|154149711|ref|YP_001403329.1| - 3.2 7.5 32.2 0.11 12.3 5.3 3.5 2 1 1 3 3 3 0 FtsX-like permease family ABC_tran PF00005.22 gi|154149712|ref|YP_001403330.1| - 5.6e-30 104.4 0.0 1e-29 103.5 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|154149712|ref|YP_001403330.1| - 3.1e-08 33.9 0.0 0.0067 16.4 0.0 2.1 1 1 1 2 2 2 2 AAA domain AAA_16 PF13191.1 gi|154149712|ref|YP_001403330.1| - 7.4e-05 22.8 0.0 0.00017 21.6 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.1 gi|154149712|ref|YP_001403330.1| - 9.3e-05 21.8 0.0 0.00018 20.9 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF258 PF03193.11 gi|154149712|ref|YP_001403330.1| - 0.00044 19.4 0.0 0.00069 18.8 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 SMC_N PF02463.14 gi|154149712|ref|YP_001403330.1| - 0.0015 17.7 0.8 0.22 10.6 0.1 2.6 2 1 1 3 3 3 2 RecF/RecN/SMC N terminal domain AAA PF00004.24 gi|154149712|ref|YP_001403330.1| - 0.0039 17.4 0.1 0.053 13.7 0.1 2.2 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.10 gi|154149712|ref|YP_001403330.1| - 0.0062 15.2 0.0 0.0084 14.8 0.0 1.1 1 0 0 1 1 1 1 Rad17 cell cycle checkpoint protein AAA_25 PF13481.1 gi|154149712|ref|YP_001403330.1| - 0.095 12.0 0.0 0.18 11.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.1 gi|154149712|ref|YP_001403330.1| - 0.1 12.7 0.0 0.26 11.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_17 PF13207.1 gi|154149712|ref|YP_001403330.1| - 0.23 12.3 1.0 0.63 10.8 0.7 1.7 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.22 gi|154149713|ref|YP_001403331.1| - 5.5e-32 110.9 0.0 6.9e-32 110.6 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|154149713|ref|YP_001403331.1| - 2.1e-15 57.4 0.1 1.7e-08 34.7 0.0 2.1 1 1 1 2 2 2 2 AAA domain AAA_16 PF13191.1 gi|154149713|ref|YP_001403331.1| - 2e-05 24.6 0.9 4.3e-05 23.5 0.6 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.1 gi|154149713|ref|YP_001403331.1| - 2.8e-05 23.5 0.3 5.7e-05 22.5 0.2 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.14 gi|154149713|ref|YP_001403331.1| - 6e-05 22.3 0.0 0.0095 15.1 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.1 gi|154149713|ref|YP_001403331.1| - 0.00013 21.1 0.0 0.0072 15.4 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain AAA_18 PF13238.1 gi|154149713|ref|YP_001403331.1| - 0.00025 21.3 0.0 0.0034 17.6 0.1 2.0 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.1 gi|154149713|ref|YP_001403331.1| - 0.0004 20.5 0.1 0.018 15.1 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.1 gi|154149713|ref|YP_001403331.1| - 0.00041 20.7 0.4 0.00055 20.3 0.3 1.2 1 0 0 1 1 1 1 AAA domain DUF258 PF03193.11 gi|154149713|ref|YP_001403331.1| - 0.0019 17.4 0.0 0.0028 16.8 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_17 PF13207.1 gi|154149713|ref|YP_001403331.1| - 0.0029 18.4 0.6 0.0067 17.2 0.4 1.6 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.1 gi|154149713|ref|YP_001403331.1| - 0.0068 16.1 1.6 0.015 15.0 0.0 2.3 4 0 0 4 4 3 1 Part of AAA domain T2SE PF00437.15 gi|154149713|ref|YP_001403331.1| - 0.0076 15.1 0.4 0.013 14.4 0.3 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_30 PF13604.1 gi|154149713|ref|YP_001403331.1| - 0.012 15.2 0.1 0.031 13.8 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.1 gi|154149713|ref|YP_001403331.1| - 0.016 14.5 0.3 0.033 13.5 0.1 1.6 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.18 gi|154149713|ref|YP_001403331.1| - 0.036 14.0 0.1 0.056 13.4 0.0 1.6 1 1 0 1 1 1 0 50S ribosome-binding GTPase NTPase_1 PF03266.10 gi|154149713|ref|YP_001403331.1| - 0.037 13.7 0.0 0.073 12.7 0.0 1.5 1 0 0 1 1 1 0 NTPase NACHT PF05729.7 gi|154149713|ref|YP_001403331.1| - 0.038 13.6 0.3 0.081 12.5 0.2 1.5 1 0 0 1 1 1 0 NACHT domain Zeta_toxin PF06414.7 gi|154149713|ref|YP_001403331.1| - 0.04 13.0 0.0 0.072 12.1 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin FtsK_SpoIIIE PF01580.13 gi|154149713|ref|YP_001403331.1| - 0.044 13.2 0.1 0.075 12.4 0.1 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family KaiC PF06745.8 gi|154149713|ref|YP_001403331.1| - 0.048 12.7 0.2 0.4 9.7 0.0 2.0 2 0 0 2 2 2 0 KaiC cobW PF02492.14 gi|154149713|ref|YP_001403331.1| - 0.054 12.9 0.1 0.098 12.0 0.0 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain NB-ARC PF00931.17 gi|154149713|ref|YP_001403331.1| - 0.058 12.2 0.0 0.086 11.6 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain Arch_ATPase PF01637.13 gi|154149713|ref|YP_001403331.1| - 0.059 13.0 0.0 0.083 12.5 0.0 1.2 1 0 0 1 1 1 0 Archaeal ATPase AAA_28 PF13521.1 gi|154149713|ref|YP_001403331.1| - 0.066 13.1 0.0 0.14 12.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_10 PF12846.2 gi|154149713|ref|YP_001403331.1| - 0.078 12.4 0.5 0.15 11.4 0.3 1.6 2 0 0 2 2 2 0 AAA-like domain Rad17 PF03215.10 gi|154149713|ref|YP_001403331.1| - 0.11 11.2 0.0 0.13 10.9 0.0 1.1 1 0 0 1 1 1 0 Rad17 cell cycle checkpoint protein SbcCD_C PF13558.1 gi|154149713|ref|YP_001403331.1| - 0.11 12.3 0.3 0.33 10.8 0.2 1.8 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit SRPRB PF09439.5 gi|154149713|ref|YP_001403331.1| - 0.13 11.4 0.0 0.26 10.4 0.0 1.5 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit Miro PF08477.8 gi|154149713|ref|YP_001403331.1| - 0.14 12.6 0.0 0.22 12.0 0.0 1.4 1 0 0 1 1 1 0 Miro-like protein MobB PF03205.9 gi|154149713|ref|YP_001403331.1| - 0.15 11.7 0.1 0.26 11.0 0.1 1.3 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B MacB_PCD PF12704.2 gi|154149714|ref|YP_001403332.1| - 1.4e-17 64.0 0.0 1.4e-17 64.0 0.0 1.9 3 0 0 3 3 3 1 MacB-like periplasmic core domain FtsX PF02687.16 gi|154149714|ref|YP_001403332.1| - 1.1e-16 60.6 15.3 1.3e-16 60.4 8.2 2.1 2 0 0 2 2 2 1 FtsX-like permease family ABC2_membrane_4 PF12730.2 gi|154149714|ref|YP_001403332.1| - 0.024 13.8 3.2 0.048 12.8 2.2 1.6 1 1 0 1 1 1 0 ABC-2 family transporter protein BPD_transp_1 PF00528.17 gi|154149714|ref|YP_001403332.1| - 0.17 11.3 15.0 0.043 13.3 8.2 1.6 2 0 0 2 2 2 0 Binding-protein-dependent transport system inner membrane component NMT1_2 PF13379.1 gi|154149715|ref|YP_001403333.1| - 4.5e-33 114.6 0.0 7.2e-33 114.0 0.0 1.2 1 0 0 1 1 1 1 NMT1-like family NMT1 PF09084.6 gi|154149715|ref|YP_001403333.1| - 4e-22 78.8 0.2 6.9e-22 78.1 0.2 1.4 1 0 0 1 1 1 1 NMT1/THI5 like Phosphonate-bd PF12974.2 gi|154149715|ref|YP_001403333.1| - 1.3e-10 41.0 0.1 2.8e-10 40.0 0.0 1.4 2 0 0 2 2 2 1 ABC transporter, phosphonate, periplasmic substrate-binding protein SBP_bac_3 PF00497.15 gi|154149715|ref|YP_001403333.1| - 1.3e-08 34.4 0.2 4.7e-07 29.2 0.1 2.3 1 1 1 2 2 2 1 Bacterial extracellular solute-binding proteins, family 3 OpuAC PF04069.7 gi|154149715|ref|YP_001403333.1| - 7.2e-08 32.0 0.0 1.3e-07 31.2 0.0 1.4 1 0 0 1 1 1 1 Substrate binding domain of ABC-type glycine betaine transport system PBP_like PF12727.2 gi|154149715|ref|YP_001403333.1| - 0.0039 16.1 0.1 0.0094 14.9 0.1 1.6 1 1 0 1 1 1 1 PBP superfamily domain DUF1628 PF07790.6 gi|154149715|ref|YP_001403333.1| - 0.016 15.9 0.5 0.044 14.5 0.3 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1628) Imm22 PF15592.1 gi|154149715|ref|YP_001403333.1| - 0.045 14.0 0.2 0.085 13.1 0.1 1.4 1 0 0 1 1 1 0 Immunity protein 22 Viral_Beta_CD PF04530.7 gi|154149715|ref|YP_001403333.1| - 0.072 13.2 0.7 3.4 7.8 0.0 2.3 2 0 0 2 2 2 0 Viral Beta C/D like family Aminotran_1_2 PF00155.16 gi|154149716|ref|YP_001403334.1| - 1.1e-70 238.4 0.0 1.2e-70 238.3 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.15 gi|154149716|ref|YP_001403334.1| - 7.8e-06 24.4 0.0 1.1e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.12 gi|154149716|ref|YP_001403334.1| - 1e-05 24.7 0.0 1.5e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Alliinase_C PF04864.8 gi|154149716|ref|YP_001403334.1| - 0.0033 16.1 0.0 0.005 15.5 0.0 1.2 1 0 0 1 1 1 1 Allinase Beta_elim_lyase PF01212.16 gi|154149716|ref|YP_001403334.1| - 0.0073 15.4 0.0 0.012 14.7 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.14 gi|154149716|ref|YP_001403334.1| - 0.012 14.3 0.0 0.023 13.4 0.0 1.4 1 1 0 1 1 1 0 Aminotransferase class-V AMP-binding_C_2 PF14535.1 gi|154149717|ref|YP_001403335.1| - 1.1e-22 79.9 0.3 1.8e-22 79.1 0.2 1.4 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.23 gi|154149717|ref|YP_001403335.1| - 1.5e-19 69.7 0.0 3.6e-19 68.4 0.0 1.6 1 1 0 1 1 1 1 AMP-binding enzyme GH3 PF03321.8 gi|154149717|ref|YP_001403335.1| - 0.0009 17.8 0.1 0.048 12.1 0.0 2.1 2 0 0 2 2 2 2 GH3 auxin-responsive promoter YARHG PF13308.1 gi|154149717|ref|YP_001403335.1| - 0.074 12.5 0.1 0.19 11.2 0.1 1.7 1 0 0 1 1 1 0 YARHG domain TPP_enzyme_C PF02775.16 gi|154149718|ref|YP_001403336.1| - 1.5e-23 83.0 0.1 2.2e-23 82.5 0.1 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.14 gi|154149719|ref|YP_001403337.1| - 5.9e-69 232.0 1.8 7.5e-69 231.7 1.2 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Transketolase_C PF02780.15 gi|154149719|ref|YP_001403337.1| - 1.6e-06 28.0 0.0 3.8e-06 26.8 0.0 1.6 1 0 0 1 1 1 1 Transketolase, C-terminal domain POR PF01558.13 gi|154149720|ref|YP_001403338.1| - 1.6e-33 116.0 0.4 1.9e-33 115.7 0.3 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase Fer4 PF00037.22 gi|154149721|ref|YP_001403339.1| - 1.7e-12 46.3 17.0 2e-06 27.1 2.7 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|154149721|ref|YP_001403339.1| - 1.3e-10 40.6 14.1 3.6e-06 26.6 2.7 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|154149721|ref|YP_001403339.1| - 9.7e-10 37.7 12.2 7.1e-05 22.4 1.7 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|154149721|ref|YP_001403339.1| - 5.5e-09 35.6 21.4 4.8e-06 26.2 8.3 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|154149721|ref|YP_001403339.1| - 1.3e-08 35.0 8.7 0.0007 19.9 2.2 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|154149721|ref|YP_001403339.1| - 2.1e-07 31.5 12.1 0.00023 21.8 2.4 2.2 2 1 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|154149721|ref|YP_001403339.1| - 8.7e-07 28.7 12.0 0.001 18.8 1.4 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|154149721|ref|YP_001403339.1| - 9.7e-07 29.2 8.7 0.001 19.5 0.9 2.2 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_9 PF13187.1 gi|154149721|ref|YP_001403339.1| - 6.5e-06 26.3 12.2 2.8e-05 24.2 8.5 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|154149721|ref|YP_001403339.1| - 2.9e-05 24.3 6.0 0.029 14.6 0.1 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|154149721|ref|YP_001403339.1| - 5.6e-05 23.1 12.7 0.015 15.5 2.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|154149721|ref|YP_001403339.1| - 0.00039 20.3 11.2 0.11 12.5 1.9 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|154149721|ref|YP_001403339.1| - 0.0018 18.6 11.6 0.018 15.4 1.7 2.2 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|154149721|ref|YP_001403339.1| - 0.002 18.5 7.7 0.33 11.4 0.4 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|154149721|ref|YP_001403339.1| - 0.017 15.6 18.4 0.25 11.9 3.8 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain AP_endonuc_2 PF01261.19 gi|154149722|ref|YP_001403340.1| - 3.1e-14 52.7 0.2 4.1e-14 52.3 0.2 1.2 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel DUF2116 PF09889.4 gi|154149723|ref|YP_001403341.1| - 8.6e-06 25.4 0.3 1.5e-05 24.6 0.2 1.4 1 0 0 1 1 1 1 Uncharacterized protein containing a Zn-ribbon (DUF2116) zf-ribbon_3 PF13248.1 gi|154149723|ref|YP_001403341.1| - 2.9e-05 23.1 3.9 8.1e-05 21.6 2.7 1.9 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|154149723|ref|YP_001403341.1| - 5.2e-05 22.5 2.1 5.2e-05 22.5 1.5 1.8 2 0 0 2 2 2 1 zinc-ribbon domain DZR PF12773.2 gi|154149723|ref|YP_001403341.1| - 7.2e-05 22.5 1.5 0.00013 21.6 1.0 1.5 1 0 0 1 1 1 1 Double zinc ribbon UPF0547 PF10571.4 gi|154149723|ref|YP_001403341.1| - 0.001 18.6 3.6 0.18 11.4 0.3 2.5 2 0 0 2 2 2 2 Uncharacterised protein family UPF0547 ODV-E18 PF10717.4 gi|154149723|ref|YP_001403341.1| - 0.02 14.2 0.3 0.048 13.1 0.0 1.8 2 0 0 2 2 2 0 Occlusion-derived virus envelope protein ODV-E18 PKD PF00801.15 gi|154149723|ref|YP_001403341.1| - 0.071 12.8 0.5 0.14 11.9 0.4 1.6 1 1 0 1 1 1 0 PKD domain zf-NADH-PPase PF09297.6 gi|154149723|ref|YP_001403341.1| - 0.17 11.3 1.2 0.8 9.2 0.8 2.0 1 1 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain Auto_anti-p27 PF06677.7 gi|154149723|ref|YP_001403341.1| - 0.59 9.9 2.7 1.7 8.4 1.9 1.8 1 1 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DUF329 PF03884.9 gi|154149723|ref|YP_001403341.1| - 1.3 8.6 4.9 11 5.6 0.2 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF329) Prok-RING_4 PF14447.1 gi|154149723|ref|YP_001403341.1| - 1.9 8.0 4.5 5.3 6.6 0.3 2.4 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 zf-C3HC4_3 PF13920.1 gi|154149723|ref|YP_001403341.1| - 2.8 7.6 5.0 48 3.7 3.5 2.3 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Methyltransf_11 PF08241.7 gi|154149724|ref|YP_001403342.1| - 1.6e-18 66.9 0.0 2.9e-18 66.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|154149724|ref|YP_001403342.1| - 1.1e-14 54.2 0.0 1.4e-14 53.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|154149724|ref|YP_001403342.1| - 7.5e-12 45.5 0.0 1.7e-11 44.3 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|154149724|ref|YP_001403342.1| - 1.1e-11 45.3 0.2 2.4e-11 44.1 0.1 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|154149724|ref|YP_001403342.1| - 1.3e-09 38.3 0.0 2.5e-09 37.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|154149724|ref|YP_001403342.1| - 1.9e-08 33.7 0.0 4.3e-08 32.5 0.0 1.5 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.1 gi|154149724|ref|YP_001403342.1| - 2.9e-08 33.5 0.0 5.5e-08 32.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|154149724|ref|YP_001403342.1| - 7.8e-08 32.3 1.8 7.8e-08 32.3 1.3 2.2 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_4 PF02390.12 gi|154149724|ref|YP_001403342.1| - 0.00046 19.2 0.0 0.0065 15.5 0.0 2.0 2 0 0 2 2 2 1 Putative methyltransferase MetW PF07021.7 gi|154149724|ref|YP_001403342.1| - 0.0022 17.4 0.0 0.0039 16.5 0.0 1.4 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW MTS PF05175.9 gi|154149724|ref|YP_001403342.1| - 0.0076 15.6 0.0 0.038 13.3 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase small domain PCMT PF01135.14 gi|154149724|ref|YP_001403342.1| - 0.012 15.1 0.0 0.031 13.8 0.0 1.6 1 1 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_5 PF01795.14 gi|154149724|ref|YP_001403342.1| - 0.15 11.3 0.0 0.65 9.2 0.0 1.8 1 1 1 2 2 2 0 MraW methylase family tRNA_anti-codon PF01336.20 gi|154149726|ref|YP_001403344.1| - 0.062 13.1 0.0 0.099 12.5 0.0 1.3 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain tRNA_anti-codon PF01336.20 gi|154149727|ref|YP_001403345.1| - 2.4e-10 40.0 0.0 9.9e-05 22.1 0.0 2.8 2 0 0 2 2 2 2 OB-fold nucleic acid binding domain DUF1858 PF08984.6 gi|154149728|ref|YP_001403346.1| - 1.1e-11 44.1 0.0 1.3e-11 43.9 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1858) HTH_28 PF13518.1 gi|154149728|ref|YP_001403346.1| - 0.014 15.4 0.1 0.047 13.7 0.1 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain Ub-Mut7C PF14451.1 gi|154149728|ref|YP_001403346.1| - 0.04 13.4 0.0 0.064 12.7 0.0 1.3 1 0 0 1 1 1 0 Mut7-C ubiquitin ScdA_N PF04405.9 gi|154149728|ref|YP_001403346.1| - 0.079 12.3 0.0 0.24 10.8 0.0 1.6 2 0 0 2 2 2 0 Domain of Unknown function (DUF542) CbiZ PF01955.13 gi|154149729|ref|YP_001403347.1| - 1.3e-45 155.5 0.0 1.7e-45 155.1 0.0 1.1 1 0 0 1 1 1 1 Adenosylcobinamide amidohydrolase zf-like PF04071.7 gi|154149729|ref|YP_001403347.1| - 6.5e-31 105.8 6.2 9.8e-31 105.3 4.3 1.3 1 0 0 1 1 1 1 Cysteine-rich small domain NRDD PF13597.1 gi|154149730|ref|YP_001403348.1| - 6.5e-13 47.6 3.6 6.5e-13 47.6 2.5 2.6 1 1 1 2 2 2 1 Anaerobic ribonucleoside-triphosphate reductase zf-ribbon_3 PF13248.1 gi|154149730|ref|YP_001403348.1| - 0.0015 17.6 16.2 0.16 11.2 0.2 3.8 3 1 1 4 4 4 3 zinc-ribbon domain DZR PF12773.2 gi|154149730|ref|YP_001403348.1| - 0.014 15.1 17.1 0.55 10.0 4.5 3.1 1 1 1 2 2 2 0 Double zinc ribbon TerY-C PF15616.1 gi|154149730|ref|YP_001403348.1| - 0.025 14.5 16.4 0.24 11.3 11.4 2.0 1 1 0 1 1 1 0 TerY-C metal binding domain PolC_DP2 PF03833.8 gi|154149730|ref|YP_001403348.1| - 0.059 11.0 5.8 0.071 10.7 4.0 1.2 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 zinc_ribbon_2 PF13240.1 gi|154149730|ref|YP_001403348.1| - 0.083 12.3 19.9 0.86 9.1 2.4 3.6 2 1 1 3 3 3 0 zinc-ribbon domain Prok-RING_2 PF14445.1 gi|154149730|ref|YP_001403348.1| - 0.1 12.5 9.8 0.076 12.9 2.3 2.2 1 1 1 2 2 2 0 Prokaryotic RING finger family 2 A2L_zn_ribbon PF08792.5 gi|154149730|ref|YP_001403348.1| - 0.14 11.6 19.3 0.09 12.2 2.5 4.1 4 0 0 4 4 4 0 A2L zinc ribbon domain Zn_Tnp_IS1595 PF12760.2 gi|154149730|ref|YP_001403348.1| - 0.28 10.9 20.3 0.23 11.3 1.6 4.2 2 1 2 4 4 3 0 Transposase zinc-ribbon domain UPF0547 PF10571.4 gi|154149730|ref|YP_001403348.1| - 0.42 10.3 18.0 0.62 9.8 0.7 3.7 4 0 0 4 4 3 0 Uncharacterised protein family UPF0547 zf-C4_Topoisom PF01396.14 gi|154149730|ref|YP_001403348.1| - 0.44 10.1 11.2 2.3 7.7 0.2 3.7 2 1 1 3 3 3 0 Topoisomerase DNA binding C4 zinc finger RecR PF02132.10 gi|154149730|ref|YP_001403348.1| - 0.52 9.7 10.9 0.25 10.7 2.0 3.0 2 1 1 3 3 3 0 RecR protein Nudix_N_2 PF14803.1 gi|154149730|ref|YP_001403348.1| - 0.67 9.6 16.0 3.9 7.2 0.2 4.4 4 1 0 4 4 4 0 Nudix N-terminal FYVE PF01363.16 gi|154149730|ref|YP_001403348.1| - 0.85 9.5 14.8 0.73 9.7 5.2 2.5 1 1 1 2 2 2 0 FYVE zinc finger zf-B_box PF00643.19 gi|154149730|ref|YP_001403348.1| - 0.98 9.3 20.9 3.9 7.4 4.8 3.2 1 1 2 3 3 3 0 B-box zinc finger NOB1_Zn_bind PF08772.6 gi|154149730|ref|YP_001403348.1| - 2.6 7.9 13.7 4.6 7.1 2.1 3.1 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like DUF1610 PF07754.6 gi|154149730|ref|YP_001403348.1| - 4.3 7.5 23.0 5.3 7.2 5.0 4.1 3 1 0 3 3 3 0 Domain of unknown function (DUF1610) OMPdecase PF00215.19 gi|154149731|ref|YP_001403349.1| - 7.4e-37 126.9 0.1 9.6e-37 126.5 0.1 1.1 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family DS PF01916.12 gi|154149732|ref|YP_001403350.1| - 3e-84 282.6 0.0 3.4e-84 282.4 0.0 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase Molydop_binding PF01568.16 gi|154149733|ref|YP_001403351.1| - 2.2e-05 24.2 0.7 0.051 13.3 0.1 2.3 1 1 1 2 2 2 2 Molydopterin dinucleotide binding domain CDC48_N PF02359.13 gi|154149733|ref|YP_001403351.1| - 8.9e-05 22.3 0.1 0.00018 21.3 0.0 1.5 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain Lyase_1 PF00206.15 gi|154149733|ref|YP_001403351.1| - 0.0031 16.7 4.3 0.0038 16.4 3.0 1.1 1 0 0 1 1 1 1 Lyase Apolipoprotein PF01442.13 gi|154149733|ref|YP_001403351.1| - 0.034 13.6 0.8 0.05 13.1 0.5 1.2 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain Endonuclease_5 PF04493.9 gi|154149733|ref|YP_001403351.1| - 0.035 13.4 0.5 0.05 12.9 0.0 1.5 2 0 0 2 2 2 0 Endonuclease V Prominin PF05478.6 gi|154149733|ref|YP_001403351.1| - 0.066 10.7 1.2 0.075 10.5 0.9 1.1 1 0 0 1 1 1 0 Prominin V-ATPase_G PF03179.10 gi|154149733|ref|YP_001403351.1| - 0.07 13.4 9.4 0.12 12.7 6.5 1.3 1 0 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit FliW PF02623.10 gi|154149733|ref|YP_001403351.1| - 0.14 11.7 0.0 0.2 11.2 0.0 1.2 1 0 0 1 1 1 0 FliW protein Phage_Gp19 PF09355.5 gi|154149733|ref|YP_001403351.1| - 0.22 11.3 2.4 4.4 7.1 0.0 2.8 1 1 0 2 2 2 0 Phage protein Gp19/Gp15/Gp42 DUF3391 PF11871.3 gi|154149733|ref|YP_001403351.1| - 0.35 11.0 4.3 0.47 10.6 3.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3391) DivIVA PF05103.8 gi|154149733|ref|YP_001403351.1| - 0.87 9.6 11.2 0.83 9.7 6.9 1.5 1 1 0 1 1 1 0 DivIVA protein DUF2317 PF10079.4 gi|154149733|ref|YP_001403351.1| - 1.4 7.4 5.7 1.7 7.1 4.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2317) ISG65-75 PF11727.3 gi|154149733|ref|YP_001403351.1| - 7.6 5.5 20.4 5.9 5.8 8.0 2.1 1 1 1 2 2 2 0 Invariant surface glycoprotein DUF1043 PF06295.7 gi|154149734|ref|YP_001403352.1| - 0.03 13.9 0.7 0.03 13.9 0.5 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1043) Selenoprotein_S PF06936.6 gi|154149734|ref|YP_001403352.1| - 0.092 12.2 0.1 0.11 11.9 0.0 1.2 1 0 0 1 1 1 0 Selenoprotein S (SelS) Phasin PF05597.6 gi|154149735|ref|YP_001403353.1| - 0.002 17.9 0.0 0.013 15.3 0.0 1.9 1 1 1 2 2 2 1 Poly(hydroxyalcanoate) granule associated protein (phasin) BLOC1_2 PF10046.4 gi|154149735|ref|YP_001403353.1| - 0.14 12.3 0.0 0.28 11.3 0.0 1.4 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF1192 PF06698.6 gi|154149736|ref|YP_001403354.1| - 0.0035 17.1 0.6 0.025 14.3 0.0 2.1 1 1 1 2 2 2 1 Protein of unknown function (DUF1192) Cep57_CLD PF14073.1 gi|154149736|ref|YP_001403354.1| - 0.054 13.3 0.2 0.055 13.2 0.1 1.1 1 0 0 1 1 1 0 Centrosome localisation domain of Cep57 Phasin PF05597.6 gi|154149736|ref|YP_001403354.1| - 0.098 12.4 0.1 0.24 11.1 0.0 1.6 1 1 1 2 2 2 0 Poly(hydroxyalcanoate) granule associated protein (phasin) Striatin PF08232.7 gi|154149737|ref|YP_001403355.1| - 0.052 13.8 0.4 0.071 13.4 0.3 1.2 1 0 0 1 1 1 0 Striatin family DUF3311 PF11755.3 gi|154149737|ref|YP_001403355.1| - 0.078 12.5 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3311) UPF0104 PF03706.8 gi|154149737|ref|YP_001403355.1| - 0.084 12.1 0.1 0.099 11.8 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0104) PspB PF06667.7 gi|154149737|ref|YP_001403355.1| - 0.14 12.0 1.0 5.6 6.9 0.0 2.2 2 0 0 2 2 2 0 Phage shock protein B IncA PF04156.9 gi|154149737|ref|YP_001403355.1| - 2.3 7.7 7.7 12 5.4 5.4 2.0 1 1 0 1 1 1 0 IncA protein Prok-RING_2 PF14445.1 gi|154149738|ref|YP_001403356.1| - 2.3e-40 136.3 7.9 2.6e-40 136.1 5.5 1.0 1 0 0 1 1 1 1 Prokaryotic RING finger family 2 Siva PF05458.7 gi|154149738|ref|YP_001403356.1| - 0.023 14.2 2.8 0.025 14.1 1.9 1.0 1 0 0 1 1 1 0 Cd27 binding protein (Siva) PHF5 PF03660.9 gi|154149738|ref|YP_001403356.1| - 0.085 12.9 2.9 0.092 12.8 2.0 1.1 1 0 0 1 1 1 0 PHF5-like protein FYVE PF01363.16 gi|154149738|ref|YP_001403356.1| - 0.13 12.2 10.3 0.88 9.5 7.2 1.9 1 1 1 2 2 2 0 FYVE zinc finger zf-C2HC5 PF06221.8 gi|154149738|ref|YP_001403356.1| - 0.23 11.2 8.9 0.33 10.7 6.2 1.3 1 1 0 1 1 1 0 Putative zinc finger motif, C2HC5-type zf-C2H2_jaz PF12171.3 gi|154149738|ref|YP_001403356.1| - 0.42 10.8 2.9 15 5.9 0.2 2.8 2 1 0 2 2 2 0 Zinc-finger double-stranded RNA-binding zf-HIT PF04438.11 gi|154149738|ref|YP_001403356.1| - 0.55 9.9 11.7 2.7 7.7 2.5 3.0 2 1 1 3 3 3 0 HIT zinc finger zf-H2C2_2 PF13465.1 gi|154149738|ref|YP_001403356.1| - 0.62 10.4 4.0 10 6.6 0.1 3.3 3 0 0 3 3 3 0 Zinc-finger double domain zf-CHY PF05495.7 gi|154149738|ref|YP_001403356.1| - 0.65 10.1 9.0 3.2 7.9 2.4 2.1 1 1 1 2 2 2 0 CHY zinc finger Elf1 PF05129.8 gi|154149738|ref|YP_001403356.1| - 1.2 8.8 6.7 2.2 8.0 4.6 1.5 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like Zn_Tnp_IS1595 PF12760.2 gi|154149738|ref|YP_001403356.1| - 1.4 8.7 11.3 5.7 6.8 4.7 2.3 1 1 1 2 2 2 0 Transposase zinc-ribbon domain zf-C3HC4_2 PF13923.1 gi|154149738|ref|YP_001403356.1| - 4.6 7.3 9.0 23 5.1 6.3 2.1 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) SNARE_assoc PF09335.6 gi|154149739|ref|YP_001403357.1| - 1.8e-21 76.5 6.6 1.8e-21 76.5 4.6 2.3 3 0 0 3 3 3 1 SNARE associated Golgi protein DUF2949 PF11165.3 gi|154149739|ref|YP_001403357.1| - 0.0021 18.2 1.1 5.2 7.3 0.4 3.2 3 0 0 3 3 3 2 Protein of unknown function (DUF2949) MpPF26 PF07666.6 gi|154149739|ref|YP_001403357.1| - 5.5 6.9 9.6 2.1 8.2 0.5 2.5 2 1 0 2 2 2 0 M penetrans paralogue family 26 Methyltransf_26 PF13659.1 gi|154149741|ref|YP_001403359.1| - 7.1e-14 51.8 0.1 2.5e-13 50.0 0.1 2.0 1 0 0 1 1 1 1 Methyltransferase domain N6_Mtase PF02384.11 gi|154149741|ref|YP_001403359.1| - 0.0014 17.7 0.0 0.0024 16.9 0.0 1.3 1 0 0 1 1 1 1 N-6 DNA Methylase Methyltransf_31 PF13847.1 gi|154149741|ref|YP_001403359.1| - 0.0058 16.2 0.0 0.012 15.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|154149741|ref|YP_001403359.1| - 0.013 16.0 0.0 0.043 14.3 0.0 1.9 1 1 0 1 1 1 0 Methyltransferase domain TaqI_C PF12950.2 gi|154149741|ref|YP_001403359.1| - 0.044 13.5 0.0 0.079 12.7 0.0 1.3 1 0 0 1 1 1 0 TaqI-like C-terminal specificity domain Methyltransf_23 PF13489.1 gi|154149741|ref|YP_001403359.1| - 0.088 12.5 0.0 0.16 11.7 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain DUF1743 PF08489.6 gi|154149742|ref|YP_001403360.1| - 5.5e-40 135.7 0.0 9.2e-40 135.0 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1743) tRNA_anti-codon PF01336.20 gi|154149742|ref|YP_001403360.1| - 0.00025 20.8 0.0 0.00045 20.0 0.0 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA_anti_2 PF13742.1 gi|154149742|ref|YP_001403360.1| - 0.007 16.2 0.0 0.015 15.1 0.0 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain C1_1 PF00130.17 gi|154149742|ref|YP_001403360.1| - 0.028 14.1 1.4 0.054 13.2 1.0 1.4 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) DZR PF12773.2 gi|154149742|ref|YP_001403360.1| - 0.059 13.2 1.6 0.14 12.0 1.1 1.6 1 0 0 1 1 1 0 Double zinc ribbon RNA_POL_M_15KD PF02150.11 gi|154149742|ref|YP_001403360.1| - 0.15 11.7 1.1 0.35 10.6 0.8 1.7 1 0 0 1 1 1 0 RNA polymerases M/15 Kd subunit zf-HIT PF04438.11 gi|154149742|ref|YP_001403360.1| - 1.9 8.2 8.5 2 8.1 4.4 2.2 2 1 0 2 2 2 0 HIT zinc finger HTH_3 PF01381.17 gi|154149743|ref|YP_001403361.1| - 1.9e-12 46.8 0.1 4.8e-12 45.5 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.1 gi|154149743|ref|YP_001403361.1| - 2.2e-08 34.1 0.6 1.2e-07 31.8 0.1 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_19 PF12844.2 gi|154149743|ref|YP_001403361.1| - 1.4e-07 31.4 0.0 3.3e-07 30.2 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.7 gi|154149743|ref|YP_001403361.1| - 0.00083 18.9 0.1 0.0022 17.6 0.1 1.6 1 0 0 1 1 1 1 HTH domain Sigma70_r4 PF04545.11 gi|154149743|ref|YP_001403361.1| - 0.0071 15.6 1.2 0.081 12.2 0.2 2.5 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_25 PF13413.1 gi|154149743|ref|YP_001403361.1| - 0.024 14.2 0.3 0.076 12.6 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_26 PF13443.1 gi|154149743|ref|YP_001403361.1| - 0.089 13.0 0.0 0.51 10.5 0.0 2.1 2 0 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain HTH_23 PF13384.1 gi|154149743|ref|YP_001403361.1| - 0.1 12.2 0.0 0.33 10.6 0.0 1.9 1 0 0 1 1 1 0 Homeodomain-like domain DUF2070 PF09843.4 gi|154149744|ref|YP_001403362.1| - 6e-53 178.9 0.1 9.4e-53 178.3 0.1 1.3 1 0 0 1 1 1 1 Predicted membrane protein (DUF2070) UPF0114 PF03350.11 gi|154149745|ref|YP_001403363.1| - 5.6e-18 65.0 9.5 5.6e-18 65.0 6.6 1.8 2 0 0 2 2 2 1 Uncharacterized protein family, UPF0114 DUF962 PF06127.6 gi|154149745|ref|YP_001403363.1| - 0.09 12.6 0.1 0.59 10.0 0.1 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF962) DUF3087 PF11286.3 gi|154149745|ref|YP_001403363.1| - 1.6 7.9 6.0 0.15 11.2 1.1 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3087) DUF898 PF05987.8 gi|154149745|ref|YP_001403363.1| - 2.9 6.6 13.6 0.31 9.8 2.1 2.0 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF898) PPR PF01535.15 gi|154149746|ref|YP_001403364.1| - 0.13 12.3 0.9 18 5.5 0.0 3.2 3 0 0 3 3 3 0 PPR repeat Cpn60_TCP1 PF00118.19 gi|154149747|ref|YP_001403365.1| - 1.2e-173 578.2 17.3 1.3e-173 578.0 12.0 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family DUF2533 PF10752.4 gi|154149747|ref|YP_001403365.1| - 0.057 13.7 0.1 20 5.5 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2533) Atrophin-1 PF03154.10 gi|154149748|ref|YP_001403366.1| - 0.48 8.4 8.7 0.49 8.4 6.0 1.1 1 0 0 1 1 1 0 Atrophin-1 family DUF2082 PF09855.4 gi|154149749|ref|YP_001403367.1| - 0.22 11.4 0.3 0.22 11.4 0.2 3.0 2 2 2 4 4 4 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) zinc_ribbon_5 PF13719.1 gi|154149749|ref|YP_001403367.1| - 0.52 9.9 13.4 1.2 8.7 2.1 3.5 3 1 0 3 3 3 0 zinc-ribbon domain zf-DNL PF05180.7 gi|154149749|ref|YP_001403367.1| - 1.6 8.4 6.8 1.1 9.0 0.4 2.7 3 1 0 3 3 3 0 DNL zinc finger zf-ribbon_3 PF13248.1 gi|154149749|ref|YP_001403367.1| - 2.1 7.6 10.4 12 5.2 0.1 4.0 5 0 0 5 5 5 0 zinc-ribbon domain Elf1 PF05129.8 gi|154149749|ref|YP_001403367.1| - 2.2 8.0 9.6 0.29 10.8 0.3 2.7 2 1 0 2 2 2 0 Transcription elongation factor Elf1 like DZR PF12773.2 gi|154149749|ref|YP_001403367.1| - 3.7 7.4 11.9 0.64 9.8 0.6 3.0 2 1 0 2 2 2 0 Double zinc ribbon Fer4 PF00037.22 gi|154149750|ref|YP_001403368.1| - 2.8e-16 58.3 13.9 4.7e-09 35.4 2.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|154149750|ref|YP_001403368.1| - 5.5e-11 41.8 12.4 6e-07 29.0 1.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|154149750|ref|YP_001403368.1| - 1.4e-10 40.8 22.3 1.1e-07 31.5 8.8 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|154149750|ref|YP_001403368.1| - 1.4e-10 40.4 11.5 5.1e-06 26.0 1.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|154149750|ref|YP_001403368.1| - 2.5e-10 40.5 8.8 7.4e-05 23.0 0.3 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|154149750|ref|YP_001403368.1| - 3.4e-09 37.2 11.7 4.3e-05 24.1 2.5 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|154149750|ref|YP_001403368.1| - 1.2e-08 34.7 12.0 3.6e-05 23.5 1.4 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|154149750|ref|YP_001403368.1| - 9.2e-08 32.2 34.1 7e-05 23.0 8.9 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|154149750|ref|YP_001403368.1| - 2.8e-07 30.7 6.0 0.00072 19.8 0.2 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|154149750|ref|YP_001403368.1| - 1.1e-06 29.1 8.2 0.0028 18.1 0.7 2.3 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_4 PF12800.2 gi|154149750|ref|YP_001403368.1| - 2.6e-05 24.1 12.9 0.0021 18.2 2.3 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.1 gi|154149750|ref|YP_001403368.1| - 5.3e-05 23.5 10.2 0.0018 18.6 1.2 2.3 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_8 PF13183.1 gi|154149750|ref|YP_001403368.1| - 7.7e-05 22.6 11.7 0.015 15.2 1.6 2.1 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|154149750|ref|YP_001403368.1| - 0.00095 19.5 17.6 0.073 13.6 3.7 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.1 gi|154149750|ref|YP_001403368.1| - 0.11 12.9 14.0 0.87 10.0 2.2 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain POR PF01558.13 gi|154149751|ref|YP_001403369.1| - 3.4e-38 131.2 0.2 4e-38 131.0 0.1 1.1 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase POR_N PF01855.14 gi|154149752|ref|YP_001403370.1| - 1.7e-66 224.0 0.3 2.3e-66 223.6 0.2 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Transketolase_C PF02780.15 gi|154149752|ref|YP_001403370.1| - 1.5e-05 24.9 0.0 3.8e-05 23.6 0.0 1.6 1 0 0 1 1 1 1 Transketolase, C-terminal domain TPP_enzyme_C PF02775.16 gi|154149753|ref|YP_001403371.1| - 6.1e-25 87.5 0.7 1.1e-24 86.7 0.5 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DXP_synthase_N PF13292.1 gi|154149753|ref|YP_001403371.1| - 0.068 12.0 0.0 0.096 11.5 0.0 1.3 1 0 0 1 1 1 0 1-deoxy-D-xylulose-5-phosphate synthase HtaA PF04213.8 gi|154149753|ref|YP_001403371.1| - 0.092 12.9 0.0 0.14 12.3 0.0 1.2 1 0 0 1 1 1 0 Htaa TrkA_C PF02080.16 gi|154149754|ref|YP_001403372.1| - 1.1e-14 53.8 0.1 2.7e-14 52.5 0.1 1.7 2 0 0 2 2 2 1 TrkA-C domain Na_H_Exchanger PF00999.16 gi|154149755|ref|YP_001403373.1| - 4e-45 153.9 50.2 5e-45 153.6 34.8 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family DCD PF06559.6 gi|154149755|ref|YP_001403373.1| - 0.11 10.8 0.2 0.17 10.2 0.1 1.2 1 0 0 1 1 1 0 2'-deoxycytidine 5'-triphosphate deaminase (DCD) MRVI1 PF05781.7 gi|154149755|ref|YP_001403373.1| - 0.35 9.2 0.7 0.53 8.6 0.5 1.2 1 0 0 1 1 1 0 MRVI1 protein CTP_transf_2 PF01467.21 gi|154149756|ref|YP_001403374.1| - 6.5e-16 58.7 0.0 1.2e-15 57.9 0.0 1.4 1 1 0 1 1 1 1 Cytidylyltransferase FAD_syn PF06574.7 gi|154149756|ref|YP_001403374.1| - 0.1 12.2 0.0 0.22 11.1 0.0 1.9 1 1 0 1 1 1 0 FAD synthetase Prok-JAB PF14464.1 gi|154149757|ref|YP_001403375.1| - 1.3e-09 37.5 0.0 1.7e-09 37.1 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain RadC PF04002.10 gi|154149757|ref|YP_001403375.1| - 0.085 12.5 0.0 0.11 12.2 0.0 1.3 1 1 0 1 1 1 0 RadC-like JAB domain AAL_decarboxy PF03306.8 gi|154149759|ref|YP_001403377.1| - 7.6e-86 286.7 0.2 9.1e-86 286.4 0.1 1.0 1 0 0 1 1 1 1 Alpha-acetolactate decarboxylase Rotamase_3 PF13616.1 gi|154149760|ref|YP_001403378.1| - 7.5e-30 103.5 0.1 8.3e-30 103.4 0.1 1.0 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase PF00639.16 gi|154149760|ref|YP_001403378.1| - 2.7e-29 101.7 0.0 3.2e-29 101.4 0.0 1.0 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_2 PF13145.1 gi|154149760|ref|YP_001403378.1| - 1.6e-13 51.3 0.0 1.8e-13 51.1 0.0 1.0 1 0 0 1 1 1 1 PPIC-type PPIASE domain RFX5_DNA_bdg PF14621.1 gi|154149760|ref|YP_001403378.1| - 0.06 12.9 0.0 0.064 12.8 0.0 1.1 1 0 0 1 1 1 0 RFX5 DNA-binding domain Pterin_bind PF00809.17 gi|154149762|ref|YP_001403380.1| - 2.7e-08 33.4 0.0 2.7e-05 23.6 0.0 2.5 1 1 1 2 2 2 2 Pterin binding enzyme DUF4346 PF14251.1 gi|154149762|ref|YP_001403380.1| - 2.9e-07 30.2 0.1 1.1e-06 28.3 0.0 2.0 1 1 0 1 1 1 1 Domain of unknown function (DUF4346) CdhD PF03599.11 gi|154149762|ref|YP_001403380.1| - 0.049 12.1 0.0 0.11 10.9 0.0 1.6 1 0 0 1 1 1 0 CO dehydrogenase/acetyl-CoA synthase delta subunit PHP_C PF13263.1 gi|154149763|ref|YP_001403381.1| - 4.8e-16 57.9 0.1 1.5e-15 56.4 0.1 1.8 2 0 0 2 2 2 1 PHP-associated PHP PF02811.14 gi|154149763|ref|YP_001403381.1| - 4.9e-16 59.0 0.2 1.1e-15 57.8 0.1 1.5 1 1 0 1 1 1 1 PHP domain Glyco_tranf_2_4 PF13704.1 gi|154149763|ref|YP_001403381.1| - 0.061 13.6 0.1 0.58 10.5 0.0 2.3 1 1 0 1 1 1 0 Glycosyl transferase family 2 Creatininase PF02633.9 gi|154149763|ref|YP_001403381.1| - 0.073 12.1 0.1 0.11 11.5 0.0 1.3 1 0 0 1 1 1 0 Creatinine amidohydrolase PseudoU_synth_1 PF01416.15 gi|154149764|ref|YP_001403382.1| - 1.8e-31 108.6 0.0 6.2e-17 61.9 0.0 2.2 2 0 0 2 2 2 2 tRNA pseudouridine synthase LMWPc PF01451.16 gi|154149765|ref|YP_001403383.1| - 6e-29 101.1 0.0 6.9e-29 100.9 0.0 1.0 1 0 0 1 1 1 1 Low molecular weight phosphotyrosine protein phosphatase GATase_3 PF07685.9 gi|154149767|ref|YP_001403385.1| - 1.8e-31 108.8 0.1 2.8e-31 108.2 0.1 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.18 gi|154149767|ref|YP_001403385.1| - 2.2e-26 92.4 0.0 3.7e-26 91.7 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.1 gi|154149767|ref|YP_001403385.1| - 9.3e-16 58.0 0.0 3.2e-10 39.9 0.0 2.3 2 0 0 2 2 2 2 AAA domain Peptidase_S51 PF03575.12 gi|154149767|ref|YP_001403385.1| - 0.00056 19.6 0.0 0.00091 18.9 0.0 1.3 1 0 0 1 1 1 1 Peptidase family S51 DUF1611 PF07755.6 gi|154149767|ref|YP_001403385.1| - 0.00094 17.9 0.2 0.0014 17.3 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1611) SNO PF01174.14 gi|154149767|ref|YP_001403385.1| - 0.12 12.0 0.0 0.22 11.1 0.0 1.4 1 0 0 1 1 1 0 SNO glutamine amidotransferase family AAA_17 PF13207.1 gi|154149767|ref|YP_001403385.1| - 0.16 12.7 0.7 0.34 11.7 0.5 1.8 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.1 gi|154149767|ref|YP_001403385.1| - 0.24 11.6 0.0 0.34 11.1 0.0 1.2 1 0 0 1 1 1 0 AAA domain DUF333 PF03891.10 gi|154149768|ref|YP_001403386.1| - 2.3e-46 155.3 8.7 6.1e-24 83.5 0.8 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF333) Granulin PF00396.13 gi|154149768|ref|YP_001403386.1| - 0.002 18.1 0.9 2.4 8.3 0.1 2.7 2 0 0 2 2 2 2 Granulin ANATO PF01821.13 gi|154149768|ref|YP_001403386.1| - 0.077 13.1 1.4 4.3 7.5 0.1 2.5 2 0 0 2 2 2 0 Anaphylotoxin-like domain cNMP_binding PF00027.24 gi|154149768|ref|YP_001403386.1| - 0.08 12.7 0.0 0.98 9.2 0.0 2.0 2 0 0 2 2 2 0 Cyclic nucleotide-binding domain FAD_binding_4 PF01565.18 gi|154149768|ref|YP_001403386.1| - 0.14 11.5 2.8 0.07 12.5 0.4 1.6 2 0 0 2 2 2 0 FAD binding domain Mucin2_WxxW PF13330.1 gi|154149768|ref|YP_001403386.1| - 0.25 11.7 3.7 5.1 7.5 0.2 2.1 1 1 1 2 2 2 0 Mucin-2 protein WxxW repeating region Resistin PF06954.6 gi|154149768|ref|YP_001403386.1| - 2.5 8.4 9.4 1.5 9.1 1.2 2.2 1 1 1 2 2 2 0 Resistin Trp_syntA PF00290.15 gi|154149769|ref|YP_001403387.1| - 5.2e-95 316.8 0.1 6.1e-95 316.6 0.0 1.0 1 0 0 1 1 1 1 Tryptophan synthase alpha chain His_biosynth PF00977.16 gi|154149769|ref|YP_001403387.1| - 5.3e-07 29.1 0.0 5.8e-06 25.7 0.0 2.0 1 1 1 2 2 2 1 Histidine biosynthesis protein PcrB PF01884.12 gi|154149769|ref|YP_001403387.1| - 4e-05 22.9 0.4 0.018 14.2 0.0 3.3 2 1 1 3 3 3 1 PcrB family ThiG PF05690.9 gi|154149769|ref|YP_001403387.1| - 0.0016 17.5 0.2 0.0076 15.3 0.1 2.1 3 0 0 3 3 3 1 Thiazole biosynthesis protein ThiG IGPS PF00218.16 gi|154149769|ref|YP_001403387.1| - 0.0075 15.3 0.0 0.33 9.9 0.0 2.1 2 0 0 2 2 2 1 Indole-3-glycerol phosphate synthase FMN_dh PF01070.13 gi|154149769|ref|YP_001403387.1| - 0.02 13.7 0.0 0.065 12.0 0.0 1.8 1 1 0 1 1 1 0 FMN-dependent dehydrogenase NanE PF04131.9 gi|154149769|ref|YP_001403387.1| - 0.026 13.5 0.1 0.076 11.9 0.0 1.8 1 1 0 1 1 1 0 Putative N-acetylmannosamine-6-phosphate epimerase DHO_dh PF01180.16 gi|154149769|ref|YP_001403387.1| - 0.05 12.5 0.1 0.073 12.0 0.0 1.2 1 0 0 1 1 1 0 Dihydroorotate dehydrogenase Radical_SAM PF04055.16 gi|154149769|ref|YP_001403387.1| - 0.14 12.2 0.0 0.58 10.3 0.0 1.9 2 1 0 2 2 2 0 Radical SAM superfamily PALP PF00291.20 gi|154149770|ref|YP_001403388.1| - 3.6e-43 147.9 0.1 4.4e-43 147.6 0.1 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme PRAI PF00697.17 gi|154149771|ref|YP_001403389.1| - 2.4e-29 102.2 0.0 4.7e-29 101.3 0.0 1.4 1 1 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BtpA PF03437.10 gi|154149771|ref|YP_001403389.1| - 0.012 14.8 0.2 0.021 14.0 0.1 1.5 2 0 0 2 2 2 0 BtpA family TMP-TENI PF02581.12 gi|154149771|ref|YP_001403389.1| - 0.048 12.7 0.1 0.75 8.8 0.0 2.3 2 1 0 2 2 2 0 Thiamine monophosphate synthase/TENI IGPS PF00218.16 gi|154149772|ref|YP_001403390.1| - 4.9e-70 235.4 0.0 5.5e-70 235.3 0.0 1.0 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase QRPTase_C PF01729.14 gi|154149772|ref|YP_001403390.1| - 0.086 12.3 0.1 0.15 11.5 0.0 1.5 1 1 0 1 1 1 0 Quinolinate phosphoribosyl transferase, C-terminal domain Glycos_transf_3 PF00591.16 gi|154149773|ref|YP_001403391.1| - 1.7e-99 332.3 2.1 2.5e-99 331.8 1.5 1.2 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.12 gi|154149773|ref|YP_001403391.1| - 4.8e-26 90.1 1.2 1.5e-25 88.5 0.9 1.9 1 0 0 1 1 1 1 Glycosyl transferase family, helical bundle domain GATase PF00117.23 gi|154149774|ref|YP_001403392.1| - 2.3e-52 177.2 0.0 2.8e-52 176.9 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|154149774|ref|YP_001403392.1| - 3.1e-07 30.0 0.0 2.6e-06 27.0 0.1 2.3 2 1 0 2 2 2 1 Peptidase C26 Chorismate_bind PF00425.13 gi|154149775|ref|YP_001403393.1| - 9.8e-99 329.8 0.0 1.8e-98 328.9 0.0 1.4 1 0 0 1 1 1 1 chorismate binding enzyme Anth_synt_I_N PF04715.8 gi|154149775|ref|YP_001403393.1| - 1.3e-32 112.7 0.0 3.2e-30 104.9 0.0 2.9 3 1 1 4 4 4 2 Anthranilate synthase component I, N terminal region TMEM169 PF15052.1 gi|154149775|ref|YP_001403393.1| - 0.16 11.8 0.0 0.29 11.0 0.0 1.3 1 0 0 1 1 1 0 TMEM169 protein family MS_channel PF00924.13 gi|154149776|ref|YP_001403394.1| - 0.0097 15.2 3.5 0.014 14.7 2.4 1.2 1 0 0 1 1 1 1 Mechanosensitive ion channel Zn-ribbon_8 PF09723.5 gi|154149776|ref|YP_001403394.1| - 0.038 13.9 0.4 1.9 8.5 0.1 2.1 2 0 0 2 2 2 0 Zinc ribbon domain Zn_Tnp_IS1595 PF12760.2 gi|154149776|ref|YP_001403394.1| - 0.92 9.3 4.5 0.42 10.4 1.0 2.0 2 1 1 3 3 3 0 Transposase zinc-ribbon domain zf-trcl PF13451.1 gi|154149776|ref|YP_001403394.1| - 2.5 7.8 5.7 16 5.2 0.1 2.7 3 0 0 3 3 3 0 Probable zinc-binding domain NnrS PF05940.7 gi|154149777|ref|YP_001403395.1| - 0.022 13.6 8.8 0.026 13.4 6.1 1.0 1 0 0 1 1 1 0 NnrS protein MscS_TM PF12794.2 gi|154149777|ref|YP_001403395.1| - 2.8 6.4 13.9 0.049 12.2 1.5 2.2 2 0 0 2 2 2 0 Mechanosensitive ion channel inner membrane domain 1 SUR7 PF06687.7 gi|154149777|ref|YP_001403395.1| - 3 7.3 13.1 0.78 9.2 0.5 2.1 2 0 0 2 2 2 0 SUR7/PalI family DUF1761 PF08570.5 gi|154149777|ref|YP_001403395.1| - 9.9 6.1 12.5 0.46 10.4 1.5 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1761) CBS PF00571.23 gi|154149778|ref|YP_001403396.1| - 0.14 11.9 0.0 0.69 9.7 0.0 1.8 2 0 0 2 2 2 0 CBS domain zinc_ribbon_6 PF14599.1 gi|154149779|ref|YP_001403397.1| - 0.0017 18.1 3.4 0.066 13.0 3.1 2.0 1 1 1 2 2 2 1 Zinc-ribbon Molybdop_Fe4S4 PF04879.11 gi|154149779|ref|YP_001403397.1| - 0.014 15.1 2.5 0.017 14.9 1.7 1.2 1 0 0 1 1 1 0 Molybdopterin oxidoreductase Fe4S4 domain C1_1 PF00130.17 gi|154149779|ref|YP_001403397.1| - 0.019 14.7 1.1 0.024 14.3 0.8 1.2 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) OrfB_Zn_ribbon PF07282.6 gi|154149779|ref|YP_001403397.1| - 0.051 13.2 1.3 0.053 13.1 0.9 1.1 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Zn-ribbon_8 PF09723.5 gi|154149779|ref|YP_001403397.1| - 0.53 10.2 5.1 0.73 9.8 3.6 1.2 1 0 0 1 1 1 0 Zinc ribbon domain zf-C2H2_3 PF13878.1 gi|154149779|ref|YP_001403397.1| - 0.55 9.8 3.1 0.24 11.0 0.4 1.7 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO DNA_RNApol_7kD PF03604.8 gi|154149779|ref|YP_001403397.1| - 0.91 9.0 4.7 2.5 7.6 3.3 1.7 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit DUF326 PF03860.11 gi|154149779|ref|YP_001403397.1| - 0.96 9.3 5.2 0.51 10.2 0.6 2.1 2 0 0 2 2 2 0 Domain of Unknown Function (DUF326) Fer4_12 PF13353.1 gi|154149780|ref|YP_001403398.1| - 1.2e-07 31.9 0.0 2.3e-07 30.9 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Radical_SAM PF04055.16 gi|154149780|ref|YP_001403398.1| - 2.5e-07 30.9 0.0 5e-07 30.0 0.0 1.5 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|154149780|ref|YP_001403398.1| - 2e-05 24.5 0.0 3.7e-05 23.7 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain SPASM PF13186.1 gi|154149780|ref|YP_001403398.1| - 0.0047 17.2 0.4 0.021 15.1 0.2 2.2 2 1 0 2 2 2 1 Iron-sulfur cluster-binding domain Exc PF07825.6 gi|154149780|ref|YP_001403398.1| - 0.032 13.9 0.0 0.091 12.5 0.0 1.7 1 0 0 1 1 1 0 Excisionase-like protein DUF3189 PF11385.3 gi|154149782|ref|YP_001403400.1| - 0.36 10.3 2.2 11 5.5 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3189) Peptidase_M48 PF01435.13 gi|154149783|ref|YP_001403401.1| - 7e-40 136.9 0.0 9.5e-40 136.5 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.6 gi|154149783|ref|YP_001403401.1| - 8.1e-08 31.5 3.1 1.5e-07 30.7 0.4 2.2 2 0 0 2 2 2 1 BlaR1 peptidase M56 MFS_2 PF13347.1 gi|154149783|ref|YP_001403401.1| - 0.0071 14.7 9.5 0.078 11.3 0.4 2.1 2 0 0 2 2 2 2 MFS/sugar transport protein Peptidase_MA_2 PF13485.1 gi|154149783|ref|YP_001403401.1| - 0.018 15.0 0.0 0.093 12.7 0.0 2.0 2 0 0 2 2 2 0 Peptidase MA superfamily DUF4013 PF13197.1 gi|154149783|ref|YP_001403401.1| - 0.022 14.0 15.0 0.14 11.4 1.6 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4013) DUF3043 PF11241.3 gi|154149783|ref|YP_001403401.1| - 0.081 12.5 0.2 0.081 12.5 0.1 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF3043) IncA PF04156.9 gi|154149783|ref|YP_001403401.1| - 0.093 12.3 0.2 0.093 12.3 0.2 2.2 2 1 0 2 2 2 0 IncA protein DUF4014 PF13198.1 gi|154149783|ref|YP_001403401.1| - 0.2 12.0 1.0 0.63 10.4 0.4 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4014) DUF1129 PF06570.6 gi|154149783|ref|YP_001403401.1| - 2.4 7.3 8.9 3.2 7.0 2.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1129) DUF1917 PF08939.5 gi|154149784|ref|YP_001403402.1| - 6.1e-46 157.1 0.0 1.3e-44 152.7 0.0 2.0 1 1 0 1 1 1 1 Domain of unknown function (DUF1917) Ribosomal_L40e PF01020.12 gi|154149785|ref|YP_001403403.1| - 6.6e-05 22.4 7.1 7.9e-05 22.1 4.9 1.1 1 0 0 1 1 1 1 Ribosomal L40e family DZR PF12773.2 gi|154149785|ref|YP_001403403.1| - 0.00068 19.4 1.0 0.00074 19.2 0.7 1.2 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.1 gi|154149785|ref|YP_001403403.1| - 0.0007 19.0 0.9 0.0011 18.3 0.6 1.3 1 0 0 1 1 1 1 zinc-ribbon domain DNA_RNApol_7kD PF03604.8 gi|154149785|ref|YP_001403403.1| - 0.0048 16.3 4.4 0.0081 15.6 3.1 1.3 1 0 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit zf-ribbon_3 PF13248.1 gi|154149785|ref|YP_001403403.1| - 0.0084 15.2 1.2 0.013 14.7 0.8 1.4 1 0 0 1 1 1 1 zinc-ribbon domain C1_1 PF00130.17 gi|154149785|ref|YP_001403403.1| - 0.051 13.3 1.1 0.067 12.9 0.7 1.2 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) UPF0547 PF10571.4 gi|154149785|ref|YP_001403403.1| - 0.053 13.2 1.3 5.1 6.8 0.1 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-DHHC PF01529.15 gi|154149785|ref|YP_001403403.1| - 0.069 12.5 1.1 0.067 12.5 0.8 1.1 1 0 0 1 1 1 0 DHHC palmitoyltransferase FYVE PF01363.16 gi|154149785|ref|YP_001403403.1| - 0.11 12.3 2.5 0.14 12.0 1.7 1.2 1 0 0 1 1 1 0 FYVE zinc finger zf-RanBP PF00641.13 gi|154149785|ref|YP_001403403.1| - 0.19 10.8 4.8 0.48 9.5 3.2 1.8 1 1 0 1 1 1 0 Zn-finger in Ran binding protein and others Zn_Tnp_IS1595 PF12760.2 gi|154149785|ref|YP_001403403.1| - 0.25 11.1 3.3 0.63 9.9 2.4 1.6 1 1 1 2 2 2 0 Transposase zinc-ribbon domain zf-tcix PF14952.1 gi|154149785|ref|YP_001403403.1| - 0.35 10.2 7.1 0.62 9.4 4.9 1.5 1 1 0 1 1 1 0 Putative treble-clef, zinc-finger, Zn-binding RNA_POL_M_15KD PF02150.11 gi|154149785|ref|YP_001403403.1| - 1.6 8.4 5.1 9.2 6.0 3.6 2.0 1 1 1 2 2 2 0 RNA polymerases M/15 Kd subunit DUF2296 PF10058.4 gi|154149785|ref|YP_001403403.1| - 6.5 6.5 6.5 7.2 6.4 0.9 2.1 1 1 1 2 2 1 0 Predicted integral membrane metal-binding protein (DUF2296) Ham1p_like PF01725.11 gi|154149786|ref|YP_001403404.1| - 1.4e-49 168.0 0.0 1.6e-49 167.8 0.0 1.0 1 0 0 1 1 1 1 Ham1 family Peptidase_M22 PF00814.20 gi|154149787|ref|YP_001403405.1| - 2.9e-77 259.7 0.0 4.1e-77 259.2 0.0 1.1 1 0 0 1 1 1 1 Glycoprotease family Kdo PF06293.9 gi|154149787|ref|YP_001403405.1| - 2.9e-07 29.7 0.1 1.1e-06 27.8 0.0 1.9 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.17 gi|154149787|ref|YP_001403405.1| - 7.1e-07 28.7 0.0 1.3e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 RIO1 family APH PF01636.18 gi|154149787|ref|YP_001403405.1| - 1e-05 25.3 0.0 0.0014 18.4 0.0 2.3 1 1 1 2 2 2 2 Phosphotransferase enzyme family Pkinase PF00069.20 gi|154149787|ref|YP_001403405.1| - 1.9e-05 23.9 0.0 3e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain EcKinase PF02958.15 gi|154149787|ref|YP_001403405.1| - 0.00043 19.5 0.0 0.00065 18.9 0.0 1.2 1 0 0 1 1 1 1 Ecdysteroid kinase Choline_kinase PF01633.15 gi|154149787|ref|YP_001403405.1| - 0.035 13.6 0.0 0.054 13.0 0.0 1.2 1 0 0 1 1 1 0 Choline/ethanolamine kinase Pkinase_Tyr PF07714.12 gi|154149787|ref|YP_001403405.1| - 0.037 13.1 0.0 0.057 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein tyrosine kinase Ribosomal_S27 PF01599.14 gi|154149788|ref|YP_001403406.1| - 1e-17 63.6 2.6 1.2e-17 63.4 1.8 1.1 1 0 0 1 1 1 1 Ribosomal protein S27a DZR PF12773.2 gi|154149788|ref|YP_001403406.1| - 0.00031 20.4 0.8 0.00042 20.0 0.5 1.2 1 0 0 1 1 1 1 Double zinc ribbon IBR PF01485.16 gi|154149788|ref|YP_001403406.1| - 0.00049 19.9 0.3 0.00049 19.9 0.2 1.1 1 0 0 1 1 1 1 IBR domain OrfB_Zn_ribbon PF07282.6 gi|154149788|ref|YP_001403406.1| - 0.003 17.1 0.4 0.0039 16.8 0.3 1.1 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Nudix_N_2 PF14803.1 gi|154149788|ref|YP_001403406.1| - 0.0032 17.1 5.4 0.02 14.6 3.8 2.0 1 1 0 1 1 1 1 Nudix N-terminal zf-ribbon_3 PF13248.1 gi|154149788|ref|YP_001403406.1| - 0.0035 16.4 1.8 0.31 10.3 0.1 2.2 2 0 0 2 2 2 1 zinc-ribbon domain DUF2082 PF09855.4 gi|154149788|ref|YP_001403406.1| - 0.0067 16.2 2.9 0.064 13.1 0.2 2.3 1 1 2 3 3 3 1 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) Ribosomal_L37e PF01907.14 gi|154149788|ref|YP_001403406.1| - 0.02 14.6 3.2 0.032 14.0 2.2 1.4 1 1 0 1 1 1 0 Ribosomal protein L37e zf-NADH-PPase PF09297.6 gi|154149788|ref|YP_001403406.1| - 0.03 13.8 3.2 0.32 10.5 0.1 2.2 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain Prok-RING_1 PF14446.1 gi|154149788|ref|YP_001403406.1| - 0.04 13.6 1.5 0.06 13.0 1.1 1.2 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 HypA PF01155.14 gi|154149788|ref|YP_001403406.1| - 0.042 13.5 0.2 0.042 13.5 0.2 1.1 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family RNA_POL_M_15KD PF02150.11 gi|154149788|ref|YP_001403406.1| - 0.046 13.4 1.7 0.11 12.1 1.2 1.6 1 1 0 1 1 1 0 RNA polymerases M/15 Kd subunit Auto_anti-p27 PF06677.7 gi|154149788|ref|YP_001403406.1| - 0.059 13.1 1.8 0.089 12.5 1.2 1.4 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Lar_restr_allev PF14354.1 gi|154149788|ref|YP_001403406.1| - 0.067 13.5 2.5 0.13 12.5 1.7 1.6 1 1 0 1 1 1 0 Restriction alleviation protein Lar zinc_ribbon_2 PF13240.1 gi|154149788|ref|YP_001403406.1| - 0.083 12.4 3.3 1.1 8.8 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain A2L_zn_ribbon PF08792.5 gi|154149788|ref|YP_001403406.1| - 0.094 12.1 1.1 0.18 11.2 0.7 1.5 1 1 0 1 1 1 0 A2L zinc ribbon domain DNA_RNApol_7kD PF03604.8 gi|154149788|ref|YP_001403406.1| - 0.11 11.9 2.2 0.21 11.0 1.5 1.5 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit Ribosomal_L23eN PF03939.8 gi|154149788|ref|YP_001403406.1| - 0.13 12.2 1.3 0.18 11.8 0.9 1.2 1 0 0 1 1 1 0 Ribosomal protein L23, N-terminal domain PAAR_motif PF05488.8 gi|154149788|ref|YP_001403406.1| - 0.37 10.7 2.2 1 9.3 1.5 2.0 1 1 1 2 2 2 0 PAAR motif NOB1_Zn_bind PF08772.6 gi|154149788|ref|YP_001403406.1| - 0.6 9.9 4.5 0.74 9.6 0.3 2.1 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like zf-HYPF PF07503.7 gi|154149788|ref|YP_001403406.1| - 0.69 9.3 3.3 3.3 7.1 0.3 2.2 2 0 0 2 2 2 0 HypF finger Zn-ribbon_8 PF09723.5 gi|154149788|ref|YP_001403406.1| - 1.1 9.2 4.3 26 4.8 2.8 2.1 1 1 1 2 2 2 0 Zinc ribbon domain DUF1936 PF09151.5 gi|154149788|ref|YP_001403406.1| - 3.2 7.3 7.4 0.36 10.3 0.6 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF1936) UPF0547 PF10571.4 gi|154149788|ref|YP_001403406.1| - 4.7 6.9 6.7 1.5 8.5 0.3 2.2 1 1 1 2 2 2 0 Uncharacterised protein family UPF0547 Ribosomal_S24e PF01282.14 gi|154149789|ref|YP_001403407.1| - 3.1e-18 65.3 0.0 3.8e-18 65.0 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S24e DUF359 PF04019.7 gi|154149790|ref|YP_001403408.1| - 4.6e-38 129.3 0.0 5.8e-38 128.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF359) Spt4 PF06093.8 gi|154149791|ref|YP_001403409.1| - 6e-13 48.4 0.1 8.3e-13 48.0 0.0 1.2 1 0 0 1 1 1 1 Spt4/RpoE2 zinc finger PHF5 PF03660.9 gi|154149791|ref|YP_001403409.1| - 0.0062 16.5 0.2 0.0066 16.5 0.2 1.1 1 0 0 1 1 1 1 PHF5-like protein Laminin_EGF PF00053.19 gi|154149791|ref|YP_001403409.1| - 0.1 12.5 2.0 0.13 12.2 1.4 1.2 1 0 0 1 1 1 0 Laminin EGF-like (Domains III and V) Prok-RING_2 PF14445.1 gi|154149791|ref|YP_001403409.1| - 0.13 12.2 0.6 0.19 11.7 0.4 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 2 RecR PF02132.10 gi|154149791|ref|YP_001403409.1| - 0.17 11.3 1.7 0.23 10.8 1.2 1.2 1 0 0 1 1 1 0 RecR protein SHS2_Rpb7-N PF03876.12 gi|154149792|ref|YP_001403410.1| - 4.3e-20 71.6 0.1 7.4e-20 70.8 0.1 1.4 1 0 0 1 1 1 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 S1 PF00575.18 gi|154149792|ref|YP_001403410.1| - 2.7e-12 46.5 0.1 8.4e-12 45.0 0.1 1.9 1 0 0 1 1 1 1 S1 RNA binding domain RNA_pol_Rbc25 PF08292.7 gi|154149792|ref|YP_001403410.1| - 0.00017 21.7 0.3 0.00074 19.7 0.2 2.2 1 1 0 1 1 1 1 RNA polymerase III subunit Rpc25 Fcf1 PF04900.7 gi|154149793|ref|YP_001403411.1| - 1.6e-06 28.1 0.0 2e-06 27.8 0.0 1.0 1 0 0 1 1 1 1 Fcf1 RNase_Zc3h12a PF11977.3 gi|154149793|ref|YP_001403411.1| - 0.011 15.5 0.0 0.014 15.2 0.0 1.2 1 0 0 1 1 1 0 Zc3h12a-like Ribonuclease NYN domain Atu4866 PF11512.3 gi|154149793|ref|YP_001403411.1| - 0.05 13.3 0.1 0.086 12.5 0.0 1.3 1 0 0 1 1 1 0 Agrobacterium tumefaciens protein Atu4866 GTP_EFTU PF00009.22 gi|154149794|ref|YP_001403412.1| - 3.3e-41 140.7 0.1 4.9e-41 140.2 0.1 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain eIF2_C PF09173.6 gi|154149794|ref|YP_001403412.1| - 6.1e-31 106.3 0.4 1.6e-30 104.9 0.3 1.8 1 0 0 1 1 1 1 Initiation factor eIF2 gamma, C terminal GTP_EFTU_D2 PF03144.20 gi|154149794|ref|YP_001403412.1| - 1.2e-07 31.6 1.1 1.2e-07 31.6 0.8 2.0 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.18 gi|154149794|ref|YP_001403412.1| - 9.9e-05 22.2 0.0 0.0002 21.3 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.13 gi|154149794|ref|YP_001403412.1| - 0.0018 17.5 1.1 0.28 10.4 0.0 2.4 2 0 0 2 2 2 2 Ferrous iron transport protein B Dynamin_N PF00350.18 gi|154149794|ref|YP_001403412.1| - 0.0063 16.3 0.0 0.027 14.2 0.0 2.1 4 0 0 4 4 4 1 Dynamin family Miro PF08477.8 gi|154149794|ref|YP_001403412.1| - 0.016 15.7 0.0 0.067 13.6 0.0 2.0 1 1 0 1 1 1 0 Miro-like protein DnaJ_CXXCXGXG PF00684.14 gi|154149794|ref|YP_001403412.1| - 0.034 14.2 0.2 0.083 12.9 0.2 1.6 1 0 0 1 1 1 0 DnaJ central domain PduV-EutP PF10662.4 gi|154149794|ref|YP_001403412.1| - 0.045 13.2 1.7 2.8 7.4 0.0 2.8 3 0 0 3 3 3 0 Ethanolamine utilisation - propanediol utilisation Zn_Tnp_IS1595 PF12760.2 gi|154149794|ref|YP_001403412.1| - 0.089 12.6 4.2 0.84 9.4 0.3 2.4 1 1 1 2 2 2 0 Transposase zinc-ribbon domain DUF2098 PF09871.4 gi|154149795|ref|YP_001403413.1| - 2e-15 56.5 0.0 2.2e-15 56.3 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2098) Gp-FAR-1 PF05823.7 gi|154149795|ref|YP_001403413.1| - 0.075 12.9 0.2 0.091 12.7 0.1 1.1 1 0 0 1 1 1 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) STT3 PF02516.9 gi|154149796|ref|YP_001403414.1| - 1.3e-23 83.7 50.8 9e-23 80.9 35.2 2.5 1 1 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit DUF3040 PF11239.3 gi|154149796|ref|YP_001403414.1| - 2.6 8.1 0.0 2.6 8.1 0.0 5.3 4 3 1 5 5 5 0 Protein of unknown function (DUF3040) Glyco_trans_1_4 PF13692.1 gi|154149797|ref|YP_001403415.1| - 1.2e-18 67.5 0.0 2.4e-18 66.5 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.15 gi|154149797|ref|YP_001403415.1| - 1.7e-14 53.6 0.0 2.9e-14 52.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.1 gi|154149797|ref|YP_001403415.1| - 1.1e-10 41.8 0.8 2e-10 41.0 0.6 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_transf_4 PF13439.1 gi|154149797|ref|YP_001403415.1| - 3.1e-08 33.5 3.4 5e-08 32.8 2.4 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.1 gi|154149797|ref|YP_001403415.1| - 2.9e-06 27.4 0.0 1.4e-05 25.3 0.0 2.0 1 1 0 1 1 1 1 Glycosyl transferases group 1 Hexapep PF00132.19 gi|154149798|ref|YP_001403416.1| - 2.8e-28 96.1 15.5 5.2e-08 32.0 0.0 5.2 4 1 0 5 5 5 5 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|154149798|ref|YP_001403416.1| - 3.5e-15 55.2 15.9 7.1e-05 22.2 0.9 5.1 5 1 1 6 6 6 5 Hexapeptide repeat of succinyl-transferase SIS PF01380.17 gi|154149799|ref|YP_001403417.1| - 7.1e-48 161.5 0.1 2.2e-23 82.2 0.1 2.7 2 0 0 2 2 2 2 SIS domain GATase_6 PF13522.1 gi|154149799|ref|YP_001403417.1| - 3.4e-24 85.2 0.1 7e-24 84.2 0.1 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.1 gi|154149799|ref|YP_001403417.1| - 4e-21 75.0 0.0 7.6e-21 74.1 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_2 PF00310.16 gi|154149799|ref|YP_001403417.1| - 1.1e-20 73.6 0.1 9.1e-16 57.5 0.0 2.4 1 1 1 2 2 2 2 Glutamine amidotransferases class-II GATase_4 PF13230.1 gi|154149799|ref|YP_001403417.1| - 0.00038 19.2 0.0 0.0006 18.5 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferases class-II SIS_2 PF13580.1 gi|154149799|ref|YP_001403417.1| - 0.11 12.2 0.1 11 5.7 0.0 2.7 2 0 0 2 2 2 0 SIS domain NTP_transferase PF00483.18 gi|154149800|ref|YP_001403418.1| - 7.4e-33 113.8 0.0 1e-32 113.4 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.19 gi|154149800|ref|YP_001403418.1| - 2e-22 77.6 33.3 2e-09 36.5 4.2 5.1 2 1 4 6 6 6 5 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.2 gi|154149800|ref|YP_001403418.1| - 3.4e-16 59.7 0.0 5.8e-16 58.9 0.0 1.4 1 1 0 1 1 1 1 MobA-like NTP transferase domain Hexapep_2 PF14602.1 gi|154149800|ref|YP_001403418.1| - 1.1e-10 40.8 21.7 8e-07 28.5 5.8 4.9 4 1 1 5 5 5 3 Hexapeptide repeat of succinyl-transferase IspD PF01128.14 gi|154149800|ref|YP_001403418.1| - 1.1e-06 28.3 0.1 1.8e-06 27.6 0.1 1.3 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Glycos_transf_2 PF00535.21 gi|154149800|ref|YP_001403418.1| - 0.00084 19.0 0.1 0.0014 18.3 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Tim17 PF02466.14 gi|154149800|ref|YP_001403418.1| - 0.036 14.1 0.0 0.067 13.2 0.0 1.4 1 0 0 1 1 1 0 Tim17/Tim22/Tim23/Pmp24 family AhpC-TSA_2 PF13911.1 gi|154149800|ref|YP_001403418.1| - 0.058 13.3 0.0 0.088 12.7 0.0 1.3 1 0 0 1 1 1 0 AhpC/TSA antioxidant enzyme NTP_transferase PF00483.18 gi|154149801|ref|YP_001403419.1| - 6.6e-37 127.1 0.0 9.1e-37 126.6 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.19 gi|154149801|ref|YP_001403419.1| - 3.7e-21 73.6 29.1 1.7e-08 33.6 1.4 4.4 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.2 gi|154149801|ref|YP_001403419.1| - 2.4e-16 60.2 0.1 2.9e-16 59.9 0.1 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep_2 PF14602.1 gi|154149801|ref|YP_001403419.1| - 9.2e-09 34.7 22.0 1.8e-06 27.4 0.2 4.5 4 0 0 4 4 4 2 Hexapeptide repeat of succinyl-transferase IspD PF01128.14 gi|154149801|ref|YP_001403419.1| - 0.00078 19.0 0.0 0.0012 18.4 0.0 1.3 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PGM_PMM_I PF02878.11 gi|154149802|ref|YP_001403420.1| - 5e-28 97.3 0.0 1.1e-27 96.1 0.0 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.11 gi|154149802|ref|YP_001403420.1| - 1.5e-21 76.7 0.1 3.1e-21 75.6 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.11 gi|154149802|ref|YP_001403420.1| - 4.9e-14 52.3 0.0 9.2e-14 51.4 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.15 gi|154149802|ref|YP_001403420.1| - 2.9e-10 39.9 0.0 8.3e-10 38.5 0.1 1.7 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain DUF364 PF04016.7 gi|154149803|ref|YP_001403421.1| - 0.0042 16.4 0.0 0.0079 15.5 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF364) Cyclase PF04199.8 gi|154149804|ref|YP_001403422.1| - 3.3e-26 92.0 0.0 4.2e-26 91.6 0.0 1.1 1 0 0 1 1 1 1 Putative cyclase PCMT PF01135.14 gi|154149805|ref|YP_001403423.1| - 9.4e-61 204.9 0.0 1.1e-60 204.7 0.0 1.0 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_18 PF12847.2 gi|154149805|ref|YP_001403423.1| - 4.4e-10 40.1 0.0 6.3e-10 39.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 gi|154149805|ref|YP_001403423.1| - 6.3e-08 31.9 0.1 1e-07 31.2 0.0 1.4 2 0 0 2 2 2 1 Ribosomal RNA adenine dimethylase Methyltransf_31 PF13847.1 gi|154149805|ref|YP_001403423.1| - 3e-06 26.8 0.0 4.2e-06 26.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|154149805|ref|YP_001403423.1| - 3.7e-06 26.9 0.2 7.3e-06 25.9 0.1 1.5 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|154149805|ref|YP_001403423.1| - 4.5e-05 22.8 0.0 7.8e-05 22.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_23 PF13489.1 gi|154149805|ref|YP_001403423.1| - 0.0083 15.8 0.0 0.011 15.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|154149805|ref|YP_001403423.1| - 0.02 15.3 0.0 0.03 14.7 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain DUF938 PF06080.7 gi|154149805|ref|YP_001403423.1| - 0.078 12.5 0.0 0.12 11.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF938) Methyltransf_4 PF02390.12 gi|154149805|ref|YP_001403423.1| - 0.095 11.7 0.0 0.13 11.2 0.0 1.2 1 0 0 1 1 1 0 Putative methyltransferase Methyltransf_32 PF13679.1 gi|154149805|ref|YP_001403423.1| - 0.12 12.0 0.0 0.18 11.5 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Cons_hypoth95 PF03602.10 gi|154149805|ref|YP_001403423.1| - 0.13 11.6 2.9 0.12 11.7 0.3 1.9 1 1 1 2 2 2 0 Conserved hypothetical protein 95 UPF0051 PF01458.12 gi|154149806|ref|YP_001403424.1| - 1.2e-49 168.8 0.2 1.5e-49 168.5 0.2 1.1 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) ABC_tran PF00005.22 gi|154149807|ref|YP_001403425.1| - 2.5e-22 79.6 0.0 3.6e-22 79.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|154149807|ref|YP_001403425.1| - 2.7e-09 37.4 0.6 0.00017 21.6 0.1 2.1 1 1 0 2 2 2 2 AAA domain AAA_29 PF13555.1 gi|154149807|ref|YP_001403425.1| - 0.00044 19.7 0.2 0.00082 18.8 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF258 PF03193.11 gi|154149807|ref|YP_001403425.1| - 0.00082 18.5 0.0 0.0014 17.8 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 SMC_N PF02463.14 gi|154149807|ref|YP_001403425.1| - 0.0013 18.0 0.0 0.088 12.0 0.0 2.2 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_25 PF13481.1 gi|154149807|ref|YP_001403425.1| - 0.0015 17.9 0.1 0.0016 17.8 0.1 1.4 1 1 0 1 1 1 1 AAA domain cobW PF02492.14 gi|154149807|ref|YP_001403425.1| - 0.0049 16.3 0.0 0.0065 15.9 0.0 1.3 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_23 PF13476.1 gi|154149807|ref|YP_001403425.1| - 0.011 16.0 0.2 0.021 15.1 0.1 1.5 2 0 0 2 2 2 0 AAA domain NACHT PF05729.7 gi|154149807|ref|YP_001403425.1| - 0.019 14.6 0.2 0.04 13.5 0.1 1.5 1 0 0 1 1 1 0 NACHT domain AAA_33 PF13671.1 gi|154149807|ref|YP_001403425.1| - 0.038 13.8 0.1 0.067 13.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain T2SE PF00437.15 gi|154149807|ref|YP_001403425.1| - 0.045 12.6 0.0 0.073 11.9 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA PF00004.24 gi|154149807|ref|YP_001403425.1| - 0.089 12.9 0.1 0.2 11.8 0.0 1.6 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_15 PF13175.1 gi|154149807|ref|YP_001403425.1| - 0.089 11.8 0.0 0.13 11.2 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.1 gi|154149807|ref|YP_001403425.1| - 0.11 12.6 0.0 0.2 11.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain FtsK_SpoIIIE PF01580.13 gi|154149807|ref|YP_001403425.1| - 0.11 11.9 0.1 0.19 11.1 0.1 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family Peptidase_M20 PF01546.23 gi|154149808|ref|YP_001403426.1| - 2.9e-28 98.6 0.0 4e-28 98.1 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.9 gi|154149808|ref|YP_001403426.1| - 8.8e-18 64.0 0.0 1.8e-17 63.0 0.0 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain Ion_trans_2 PF07885.11 gi|154149809|ref|YP_001403427.1| - 1.2e-13 50.5 6.8 1.2e-13 50.5 4.7 2.4 3 0 0 3 3 3 1 Ion channel Ion_trans PF00520.26 gi|154149809|ref|YP_001403427.1| - 2.4e-11 43.2 9.8 2.4e-11 43.2 6.8 2.5 2 1 0 2 2 2 1 Ion transport protein Pyridoxal_deC PF00282.14 gi|154149809|ref|YP_001403427.1| - 0.083 11.3 0.0 0.12 10.7 0.0 1.2 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase conserved domain GTP_EFTU PF00009.22 gi|154149810|ref|YP_001403428.1| - 7.9e-59 198.2 0.3 1.4e-58 197.4 0.2 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.13 gi|154149810|ref|YP_001403428.1| - 8.2e-28 96.3 0.5 3.7e-27 94.2 0.0 2.4 2 0 0 2 2 2 1 Elongation factor G, domain IV EFG_II PF14492.1 gi|154149810|ref|YP_001403428.1| - 3.8e-25 87.5 1.3 1.2e-24 85.9 0.2 2.3 2 0 0 2 2 2 1 Elongation Factor G, domain II EFG_C PF00679.19 gi|154149810|ref|YP_001403428.1| - 2.9e-23 81.5 0.0 1.3e-22 79.4 0.0 2.1 2 0 0 2 2 2 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.20 gi|154149810|ref|YP_001403428.1| - 2.7e-15 56.2 1.5 2.7e-15 56.2 1.1 2.9 3 0 0 3 3 3 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.18 gi|154149810|ref|YP_001403428.1| - 0.00025 20.9 0.0 0.00065 19.6 0.0 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase Ribosomal_S7 PF00177.16 gi|154149811|ref|YP_001403429.1| - 1.6e-37 128.3 1.5 1.9e-37 128.1 1.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e Ribosom_S12_S23 PF00164.20 gi|154149812|ref|YP_001403430.1| - 8.9e-38 128.4 0.2 1e-37 128.2 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S12/S23 PTPS PF01242.14 gi|154149813|ref|YP_001403431.1| - 3.5e-32 110.6 0.0 3.9e-32 110.5 0.0 1.0 1 0 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase DUF3314 PF11771.3 gi|154149813|ref|YP_001403431.1| - 0.0082 15.9 0.0 0.011 15.5 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3314) Fer4_14 PF13394.1 gi|154149814|ref|YP_001403432.1| - 3.3e-21 75.5 0.1 4.8e-21 74.9 0.1 1.2 1 0 0 1 1 1 1 4Fe-4S single cluster domain Radical_SAM PF04055.16 gi|154149814|ref|YP_001403432.1| - 3.9e-14 53.1 0.1 4.9e-14 52.8 0.1 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|154149814|ref|YP_001403432.1| - 2.1e-13 50.5 0.2 2.8e-13 50.1 0.1 1.2 1 0 0 1 1 1 1 4Fe-4S single cluster domain NUDIX PF00293.23 gi|154149815|ref|YP_001403433.1| - 1.3e-16 60.4 0.0 1.7e-16 60.1 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain Abhydrolase_5 PF12695.2 gi|154149816|ref|YP_001403434.1| - 3.5e-13 49.5 0.0 5.2e-13 48.9 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_6 PF12697.2 gi|154149816|ref|YP_001403434.1| - 1.6e-07 31.4 0.1 4.2e-05 23.5 0.0 2.2 1 1 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.3 gi|154149816|ref|YP_001403434.1| - 0.0019 17.9 0.0 0.0048 16.7 0.0 1.7 2 0 0 2 2 2 1 Putative lysophospholipase AXE1 PF05448.7 gi|154149816|ref|YP_001403434.1| - 0.0021 16.6 0.6 0.0053 15.3 0.4 1.6 1 1 0 1 1 1 1 Acetyl xylan esterase (AXE1) Peptidase_S9 PF00326.16 gi|154149816|ref|YP_001403434.1| - 0.72 9.0 3.6 5.1 6.2 2.5 2.3 1 1 0 1 1 1 0 Prolyl oligopeptidase family eRF1_3 PF03465.10 gi|154149817|ref|YP_001403435.1| - 1.8e-28 99.0 0.0 6.3e-28 97.3 0.0 1.9 2 0 0 2 2 2 1 eRF1 domain 3 eRF1_2 PF03464.10 gi|154149817|ref|YP_001403435.1| - 3.1e-28 98.7 0.0 5.5e-28 97.9 0.0 1.4 1 0 0 1 1 1 1 eRF1 domain 2 eRF1_1 PF03463.10 gi|154149817|ref|YP_001403435.1| - 1.6e-23 82.7 0.0 3.7e-23 81.5 0.0 1.5 2 0 0 2 2 2 1 eRF1 domain 1 zinc_ribbon_5 PF13719.1 gi|154149817|ref|YP_001403435.1| - 0.022 14.3 2.1 0.25 10.9 0.1 2.9 3 0 0 3 3 3 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|154149817|ref|YP_001403435.1| - 0.031 13.9 2.1 0.44 10.2 0.1 2.9 3 0 0 3 3 3 0 zinc-ribbon domain tRNA-synt_1d PF00750.14 gi|154149818|ref|YP_001403436.1| - 1.2e-48 165.8 0.0 1.5e-48 165.4 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.10 gi|154149818|ref|YP_001403436.1| - 5.4e-32 110.2 0.4 1.4e-31 108.9 0.3 1.8 1 0 0 1 1 1 1 DALR anticodon binding domain Arg_tRNA_synt_N PF03485.11 gi|154149818|ref|YP_001403436.1| - 1.9e-12 47.5 0.3 3.3e-11 43.5 0.0 2.8 3 0 0 3 3 3 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1f PF01921.13 gi|154149818|ref|YP_001403436.1| - 5.2e-06 25.3 0.0 0.052 12.2 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (K) tRNA-synt_1g PF09334.6 gi|154149818|ref|YP_001403436.1| - 0.0056 15.3 0.0 0.18 10.4 0.0 2.4 2 0 0 2 2 2 1 tRNA synthetases class I (M) tRNA-synt_1e PF01406.14 gi|154149818|ref|YP_001403436.1| - 0.066 12.3 0.0 0.29 10.2 0.0 1.9 2 0 0 2 2 2 0 tRNA synthetases class I (C) catalytic domain tRNA-synt_1 PF00133.17 gi|154149818|ref|YP_001403436.1| - 0.091 10.7 0.0 0.19 9.7 0.0 1.4 1 0 0 1 1 1 0 tRNA synthetases class I (I, L, M and V) Wyosine_form PF08608.7 gi|154149819|ref|YP_001403437.1| - 1.1e-20 73.5 0.0 1.9e-20 72.6 0.0 1.5 1 0 0 1 1 1 1 Wyosine base formation Radical_SAM PF04055.16 gi|154149819|ref|YP_001403437.1| - 1.4e-18 67.6 0.0 6e-18 65.5 0.0 1.9 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|154149819|ref|YP_001403437.1| - 0.0052 16.7 0.2 0.02 14.8 0.2 1.9 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|154149819|ref|YP_001403437.1| - 0.017 15.2 0.1 0.04 14.0 0.0 1.6 1 0 0 1 1 1 0 4Fe-4S single cluster domain TP_methylase PF00590.15 gi|154149819|ref|YP_001403437.1| - 0.12 12.0 0.0 0.2 11.3 0.0 1.3 1 0 0 1 1 1 0 Tetrapyrrole (Corrin/Porphyrin) Methylases HAD_2 PF13419.1 gi|154149819|ref|YP_001403437.1| - 0.14 12.3 0.0 0.47 10.6 0.0 1.7 1 1 0 1 1 1 0 Haloacid dehalogenase-like hydrolase tRNA-synt_2d PF01409.15 gi|154149820|ref|YP_001403438.1| - 3.4e-53 180.3 0.0 1.9e-48 164.8 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) tRNA-synt_2b PF00587.20 gi|154149820|ref|YP_001403438.1| - 0.0003 20.4 0.0 0.00072 19.1 0.0 1.7 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA-synt_2 PF00152.15 gi|154149820|ref|YP_001403438.1| - 0.16 10.6 0.1 2.6 6.7 0.0 2.2 2 0 0 2 2 2 0 tRNA synthetases class II (D, K and N) Response_reg PF00072.19 gi|154149821|ref|YP_001403439.1| - 5.2e-14 52.2 0.0 1.2e-13 51.0 0.0 1.6 1 0 0 1 1 1 1 Response regulator receiver domain HATPase_c PF02518.21 gi|154149821|ref|YP_001403439.1| - 3e-12 46.2 0.0 5.7e-12 45.3 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_4 PF08448.5 gi|154149821|ref|YP_001403439.1| - 1.8e-09 37.6 0.0 1.4e-08 34.7 0.0 2.3 2 0 0 2 2 2 1 PAS fold PAS_9 PF13426.1 gi|154149821|ref|YP_001403439.1| - 7.7e-06 26.2 0.0 4.7e-05 23.6 0.0 2.3 3 0 0 3 3 3 1 PAS domain PAS PF00989.19 gi|154149821|ref|YP_001403439.1| - 8.4e-06 25.5 0.0 1.5e-05 24.7 0.0 1.5 1 0 0 1 1 1 1 PAS fold HisKA PF00512.20 gi|154149821|ref|YP_001403439.1| - 0.002 18.0 0.0 0.0085 16.0 0.0 2.1 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_8 PF13188.1 gi|154149821|ref|YP_001403439.1| - 0.023 14.5 0.0 0.064 13.1 0.0 1.8 1 0 0 1 1 1 0 PAS domain PRK PF00485.13 gi|154149822|ref|YP_001403440.1| - 8.8e-48 162.4 0.0 1.3e-47 161.9 0.0 1.2 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family AAA_17 PF13207.1 gi|154149822|ref|YP_001403440.1| - 3.5e-05 24.6 0.0 7.7e-05 23.5 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|154149822|ref|YP_001403440.1| - 0.0014 18.9 0.0 0.0028 17.9 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|154149822|ref|YP_001403440.1| - 0.0042 16.5 0.1 0.01 15.3 0.1 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain Zeta_toxin PF06414.7 gi|154149822|ref|YP_001403440.1| - 0.0055 15.8 0.0 0.0089 15.1 0.0 1.3 1 0 0 1 1 1 1 Zeta toxin T2SE PF00437.15 gi|154149822|ref|YP_001403440.1| - 0.0069 15.3 0.0 0.01 14.7 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein IIGP PF05049.8 gi|154149822|ref|YP_001403440.1| - 0.01 14.6 0.1 0.015 14.1 0.0 1.1 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) AAA_16 PF13191.1 gi|154149822|ref|YP_001403440.1| - 0.014 15.4 0.0 0.024 14.6 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain UPF0079 PF02367.12 gi|154149822|ref|YP_001403440.1| - 0.014 14.9 0.0 0.026 14.1 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 ABC_tran PF00005.22 gi|154149822|ref|YP_001403440.1| - 0.028 14.6 0.0 0.049 13.9 0.0 1.3 1 0 0 1 1 1 0 ABC transporter ATP_bind_1 PF03029.12 gi|154149822|ref|YP_001403440.1| - 0.082 12.4 0.0 0.13 11.7 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein UbiA PF01040.13 gi|154149823|ref|YP_001403441.1| - 0.00067 18.9 2.8 0.0008 18.7 1.9 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family DUF2892 PF11127.3 gi|154149823|ref|YP_001403441.1| - 0.0037 17.0 4.3 0.0037 17.0 2.9 2.5 3 0 0 3 3 3 2 Protein of unknown function (DUF2892) DUF95 PF01944.12 gi|154149823|ref|YP_001403441.1| - 0.0078 15.8 0.1 0.0078 15.8 0.1 1.7 2 1 0 2 2 2 1 Integral membrane protein DUF95 DUF2754 PF10953.3 gi|154149823|ref|YP_001403441.1| - 0.11 12.6 1.2 0.28 11.2 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2754) TctB PF07331.6 gi|154149823|ref|YP_001403441.1| - 0.34 10.5 7.3 3.3 7.3 0.4 2.6 1 1 1 2 2 2 0 Tripartite tricarboxylate transporter TctB family YbjM PF11045.3 gi|154149823|ref|YP_001403441.1| - 0.43 10.3 2.3 0.72 9.6 0.1 2.1 2 1 0 2 2 2 0 Putative inner membrane protein of Enterobacteriaceae IncA PF04156.9 gi|154149823|ref|YP_001403441.1| - 1.2 8.7 9.8 0.78 9.2 6.2 1.3 1 1 0 1 1 1 0 IncA protein DUF3185 PF11381.3 gi|154149823|ref|YP_001403441.1| - 4.4 7.1 7.9 5.5 6.8 0.0 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF3185) DUF373 PF04123.8 gi|154149823|ref|YP_001403441.1| - 6.5 5.6 5.9 2.6 6.9 2.5 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF373) HTH_3 PF01381.17 gi|154149824|ref|YP_001403442.1| - 4.8e-13 48.7 0.0 5.6e-13 48.5 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.2 gi|154149824|ref|YP_001403442.1| - 2.7e-09 36.9 0.0 3e-09 36.7 0.0 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.1 gi|154149824|ref|YP_001403442.1| - 9.9e-08 32.0 0.0 1.2e-07 31.8 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.1 gi|154149824|ref|YP_001403442.1| - 8.2e-05 22.7 0.0 9.4e-05 22.5 0.0 1.1 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_25 PF13413.1 gi|154149824|ref|YP_001403442.1| - 0.0063 16.1 0.0 0.0078 15.8 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.1 gi|154149824|ref|YP_001403442.1| - 0.024 14.4 0.0 0.038 13.8 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Crp_2 PF13545.1 gi|154149824|ref|YP_001403442.1| - 0.04 13.7 0.0 0.064 13.0 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain MerR PF00376.18 gi|154149824|ref|YP_001403442.1| - 0.14 11.7 0.0 0.27 10.8 0.0 1.4 1 0 0 1 1 1 0 MerR family regulatory protein DEAD PF00270.24 gi|154149825|ref|YP_001403443.1| - 1.1e-28 99.8 0.0 1.7e-28 99.2 0.0 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase DUF1998 PF09369.5 gi|154149825|ref|YP_001403443.1| - 1e-17 64.4 0.1 2.8e-17 63.0 0.0 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF1998) Helicase_C PF00271.26 gi|154149825|ref|YP_001403443.1| - 6.5e-12 45.1 0.0 7.4e-10 38.5 0.0 2.8 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|154149825|ref|YP_001403443.1| - 4.8e-05 23.2 0.0 7.8e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit RNase_H_2 PF13482.1 gi|154149826|ref|YP_001403444.1| - 5.2e-34 117.4 0.0 6.9e-34 117.0 0.0 1.2 1 0 0 1 1 1 1 RNase_H superfamily HHH_5 PF14520.1 gi|154149826|ref|YP_001403444.1| - 0.0001 22.3 0.1 0.00027 21.0 0.1 1.8 1 1 0 1 1 1 1 Helix-hairpin-helix domain DNA_pol_lambd_f PF10391.4 gi|154149826|ref|YP_001403444.1| - 0.0002 20.8 0.1 0.00073 19.0 0.0 2.0 2 0 0 2 2 2 1 Fingers domain of DNA polymerase lambda DNA_pol_B_exo2 PF10108.4 gi|154149826|ref|YP_001403444.1| - 0.00039 20.0 0.0 0.0023 17.4 0.0 1.9 1 1 1 2 2 2 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB DNA_pol_B_exo1 PF03104.14 gi|154149826|ref|YP_001403444.1| - 0.00095 18.1 0.0 0.0014 17.5 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase family B, exonuclease domain GATase PF00117.23 gi|154149827|ref|YP_001403445.1| - 5.1e-16 58.7 0.0 6.7e-16 58.3 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|154149827|ref|YP_001403445.1| - 4.8e-06 26.1 0.2 3.2e-05 23.4 0.1 2.0 1 1 0 1 1 1 1 Peptidase C26 GATase_3 PF07685.9 gi|154149827|ref|YP_001403445.1| - 0.035 13.7 0.0 0.054 13.0 0.0 1.3 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain DJ-1_PfpI PF01965.19 gi|154149827|ref|YP_001403445.1| - 0.057 12.8 0.0 0.065 12.6 0.0 1.3 1 0 0 1 1 1 0 DJ-1/PfpI family Hydrolase_6 PF13344.1 gi|154149828|ref|YP_001403446.1| - 5e-22 77.7 0.0 1e-21 76.7 0.0 1.5 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.1 gi|154149828|ref|YP_001403446.1| - 2.8e-15 55.7 0.5 6.6e-15 54.5 0.0 1.9 2 0 0 2 2 2 1 HAD-hyrolase-like Hydrolase PF00702.21 gi|154149828|ref|YP_001403446.1| - 1e-10 42.4 0.4 1e-08 35.8 0.2 2.6 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.1 gi|154149828|ref|YP_001403446.1| - 5.8e-10 39.6 0.0 1.7e-05 25.0 0.0 2.5 2 0 0 2 2 2 2 Haloacid dehalogenase-like hydrolase Acid_phosphat_B PF03767.9 gi|154149828|ref|YP_001403446.1| - 0.038 13.3 0.0 0.08 12.3 0.0 1.5 1 0 0 1 1 1 0 HAD superfamily, subfamily IIIB (Acid phosphatase) TBPIP PF07106.8 gi|154149829|ref|YP_001403447.1| - 0.0037 16.8 0.4 0.0097 15.4 0.1 1.7 2 0 0 2 2 2 1 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) Transglut_core PF01841.14 gi|154149829|ref|YP_001403447.1| - 0.0044 17.2 0.1 0.17 12.0 0.0 2.9 3 0 0 3 3 3 1 Transglutaminase-like superfamily DUF553 PF04473.7 gi|154149829|ref|YP_001403447.1| - 0.0072 15.6 0.0 0.012 14.8 0.0 1.4 1 0 0 1 1 1 1 Transglutaminase-like domain YjeF_N PF03853.10 gi|154149829|ref|YP_001403447.1| - 0.0093 15.5 0.0 0.019 14.5 0.0 1.5 1 0 0 1 1 1 1 YjeF-related protein N-terminus HrpB7 PF09486.5 gi|154149829|ref|YP_001403447.1| - 0.026 14.4 2.5 0.75 9.7 0.4 2.2 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB7) AAA_13 PF13166.1 gi|154149829|ref|YP_001403447.1| - 0.06 11.8 0.1 0.079 11.4 0.1 1.1 1 0 0 1 1 1 0 AAA domain N6_N4_Mtase PF01555.13 gi|154149830|ref|YP_001403448.1| - 2.8e-35 121.8 0.1 3.7e-35 121.5 0.1 1.1 1 0 0 1 1 1 1 DNA methylase Methyltransf_26 PF13659.1 gi|154149830|ref|YP_001403448.1| - 3.5e-15 56.0 0.1 4.6e-08 33.0 0.0 2.2 2 0 0 2 2 2 2 Methyltransferase domain UPF0020 PF01170.13 gi|154149830|ref|YP_001403448.1| - 1.3e-06 28.1 0.0 0.00019 21.0 0.0 2.2 2 0 0 2 2 2 2 Putative RNA methylase family UPF0020 Methyltransf_11 PF08241.7 gi|154149830|ref|YP_001403448.1| - 9.3e-05 22.8 0.0 0.13 12.7 0.0 2.9 2 1 0 2 2 2 2 Methyltransferase domain Methyltransf_15 PF09445.5 gi|154149830|ref|YP_001403448.1| - 0.00012 21.7 0.0 0.046 13.2 0.0 2.2 2 0 0 2 2 2 2 RNA cap guanine-N2 methyltransferase Methyltransf_18 PF12847.2 gi|154149830|ref|YP_001403448.1| - 0.00025 21.5 0.0 0.069 13.7 0.0 2.3 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|154149830|ref|YP_001403448.1| - 0.00069 19.2 0.0 0.83 9.2 0.0 2.1 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_25 PF13649.1 gi|154149830|ref|YP_001403448.1| - 0.043 14.1 0.0 4.3 7.7 0.0 2.4 2 0 0 2 2 2 0 Methyltransferase domain LVIVD PF08309.6 gi|154149831|ref|YP_001403449.1| - 2.4e-62 205.6 32.2 2.2e-12 45.7 0.6 7.4 7 0 0 7 7 7 7 LVIVD repeat SBP56 PF05694.6 gi|154149831|ref|YP_001403449.1| - 0.0034 15.9 0.0 13 4.1 0.0 4.7 3 2 1 5 5 5 2 56kDa selenium binding protein (SBP56) DUF1508 PF07411.7 gi|154149832|ref|YP_001403450.1| - 0.031 13.7 1.3 0.084 12.3 0.4 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF1508) AAA_4 PF04326.9 gi|154149834|ref|YP_001403452.1| - 9.2e-19 67.7 0.4 2.2e-18 66.5 0.2 1.7 1 0 0 1 1 1 1 Divergent AAA domain Mucin PF01456.12 gi|154149835|ref|YP_001403453.1| - 0.029 14.1 10.9 0.046 13.4 7.6 1.3 1 0 0 1 1 1 0 Mucin-like glycoprotein DUF1180 PF06679.7 gi|154149835|ref|YP_001403453.1| - 0.21 11.4 1.9 0.24 11.2 1.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) DUF2451 PF10474.4 gi|154149836|ref|YP_001403454.1| - 0.019 14.7 4.7 0.2 11.3 0.2 2.5 2 0 0 2 2 2 0 Protein of unknown function C-terminus (DUF2451) Hydrolase_6 PF13344.1 gi|154149836|ref|YP_001403454.1| - 0.05 13.4 0.9 0.45 10.4 0.2 2.7 1 1 0 2 2 2 0 Haloacid dehalogenase-like hydrolase DUF4577 PF15145.1 gi|154149836|ref|YP_001403454.1| - 0.056 13.3 0.6 1.8 8.4 0.0 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4577) DUF1019 PF06254.6 gi|154149836|ref|YP_001403454.1| - 0.21 11.7 2.7 0.9 9.7 0.1 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1019) DUF1515 PF07439.6 gi|154149836|ref|YP_001403454.1| - 0.27 11.0 2.9 9.1 6.1 0.0 3.6 1 1 2 4 4 4 0 Protein of unknown function (DUF1515) DUF4473 PF14747.1 gi|154149836|ref|YP_001403454.1| - 0.42 10.8 6.4 11 6.2 0.1 4.0 3 2 2 5 5 5 0 Domain of unknown function (DUF4473) SPT16 PF08644.6 gi|154149836|ref|YP_001403454.1| - 0.49 10.2 9.8 1.7 8.4 1.8 2.7 2 1 1 3 3 3 0 FACT complex subunit (SPT16/CDC68) Apolipoprotein PF01442.13 gi|154149836|ref|YP_001403454.1| - 0.94 8.9 23.7 7.9 5.9 13.3 3.2 2 2 1 3 3 3 0 Apolipoprotein A1/A4/E domain YlqD PF11068.3 gi|154149836|ref|YP_001403454.1| - 0.97 9.4 26.4 0.57 10.2 2.2 3.5 2 1 1 3 3 3 0 YlqD protein ESX-1_EspG PF14011.1 gi|154149836|ref|YP_001403454.1| - 1 8.5 9.2 0.93 8.6 3.7 2.1 1 1 1 2 2 2 0 EspG family DUF2203 PF09969.4 gi|154149836|ref|YP_001403454.1| - 1.3 9.2 11.3 0.4 10.9 0.6 3.5 1 1 3 4 4 4 0 Uncharacterized conserved protein (DUF2203) LUC7 PF03194.10 gi|154149836|ref|YP_001403454.1| - 1.5 8.3 9.2 0.72 9.3 4.3 2.1 1 1 1 2 2 2 0 LUC7 N_terminus DUF2935 PF11155.3 gi|154149836|ref|YP_001403454.1| - 1.6 8.8 6.0 24 5.0 2.2 3.0 2 1 0 2 2 2 0 Domain of unknown function (DUF2935) PspB PF06667.7 gi|154149836|ref|YP_001403454.1| - 6.7 6.7 12.0 4.4 7.3 0.1 4.1 3 1 1 4 4 4 0 Phage shock protein B COG2 PF06148.6 gi|154149836|ref|YP_001403454.1| - 9.8 6.0 10.4 9.3 6.1 0.3 3.4 3 2 0 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 HAD_2 PF13419.1 gi|154149837|ref|YP_001403455.1| - 0.029 14.5 0.5 0.76 9.9 0.2 2.3 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase SpaB_C PF14028.1 gi|154149837|ref|YP_001403455.1| - 0.6 9.6 5.1 1.7 8.1 3.5 1.8 1 1 0 1 1 1 0 SpaB C-terminal domain MarR_2 PF12802.2 gi|154149838|ref|YP_001403456.1| - 4.2e-06 26.3 0.0 7.5e-06 25.5 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.5 gi|154149838|ref|YP_001403456.1| - 2.9e-05 23.5 0.0 5.5e-05 22.6 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain TrmB PF01978.14 gi|154149838|ref|YP_001403456.1| - 0.0011 18.6 0.0 0.0019 17.8 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.15 gi|154149838|ref|YP_001403456.1| - 0.0019 17.8 0.1 0.0038 16.8 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family Penicillinase_R PF03965.11 gi|154149838|ref|YP_001403456.1| - 0.0058 16.7 0.0 0.0096 15.9 0.0 1.3 1 0 0 1 1 1 1 Penicillinase repressor DUF4010 PF13194.1 gi|154149838|ref|YP_001403456.1| - 0.045 13.0 0.0 0.1 11.8 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4010) HTH_20 PF12840.2 gi|154149838|ref|YP_001403456.1| - 0.056 13.2 0.0 0.11 12.2 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain DUF4245 PF14030.1 gi|154149838|ref|YP_001403456.1| - 0.11 12.1 0.0 14 5.3 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4245) PaaX PF07848.7 gi|154149838|ref|YP_001403456.1| - 0.12 12.3 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 PaaX-like protein Response_reg PF00072.19 gi|154149839|ref|YP_001403457.1| - 2.2e-22 79.1 0.0 4.6e-22 78.1 0.0 1.5 1 0 0 1 1 1 1 Response regulator receiver domain GAF_2 PF13185.1 gi|154149839|ref|YP_001403457.1| - 8.2e-19 68.5 0.0 1.7e-18 67.5 0.0 1.5 1 0 0 1 1 1 1 GAF domain HATPase_c PF02518.21 gi|154149839|ref|YP_001403457.1| - 2.3e-13 49.8 0.0 4.9e-13 48.7 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GAF PF01590.21 gi|154149839|ref|YP_001403457.1| - 2.1e-07 31.1 0.0 4.3e-07 30.1 0.0 1.6 1 0 0 1 1 1 1 GAF domain GAF_3 PF13492.1 gi|154149839|ref|YP_001403457.1| - 7.8e-06 26.0 0.0 1.7e-05 24.8 0.0 1.6 1 0 0 1 1 1 1 GAF domain HisKA PF00512.20 gi|154149839|ref|YP_001403457.1| - 0.0065 16.4 0.8 0.023 14.6 0.3 2.1 1 1 1 2 2 2 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.1 gi|154149839|ref|YP_001403457.1| - 0.044 13.4 0.0 0.087 12.4 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Autoind_bind PF03472.10 gi|154149839|ref|YP_001403457.1| - 0.12 11.6 0.0 0.25 10.6 0.0 1.5 1 0 0 1 1 1 0 Autoinducer binding domain CorA PF01544.13 gi|154149839|ref|YP_001403457.1| - 6.5 5.6 7.1 3.5 6.5 1.7 2.2 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein Pyridox_oxidase PF01243.15 gi|154149840|ref|YP_001403458.1| - 2.9e-18 65.6 0.0 3.6e-18 65.3 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase DUF447 PF04289.7 gi|154149840|ref|YP_001403458.1| - 0.019 14.5 0.0 0.03 13.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF447) FIST PF08495.5 gi|154149841|ref|YP_001403459.1| - 1.2e-33 115.9 3.1 4.4e-32 110.8 1.1 2.1 2 0 0 2 2 2 2 FIST N domain FIST_C PF10442.4 gi|154149841|ref|YP_001403459.1| - 3.1e-21 75.7 0.0 1.7e-20 73.3 0.0 2.0 2 0 0 2 2 2 1 FIST C domain PAS_9 PF13426.1 gi|154149842|ref|YP_001403460.1| - 2.4e-33 114.5 0.0 8.2e-19 67.9 0.0 3.7 3 0 0 3 3 3 2 PAS domain PAS_3 PF08447.6 gi|154149842|ref|YP_001403460.1| - 9e-31 105.8 0.1 3.4e-15 55.8 0.1 2.6 2 0 0 2 2 2 2 PAS fold PAS PF00989.19 gi|154149842|ref|YP_001403460.1| - 1.3e-30 105.4 0.0 1.3e-15 57.1 0.0 3.7 3 0 0 3 3 3 3 PAS fold PAS_4 PF08448.5 gi|154149842|ref|YP_001403460.1| - 1.7e-27 95.5 0.0 7.2e-15 54.9 0.0 3.6 3 0 0 3 3 3 2 PAS fold HATPase_c PF02518.21 gi|154149842|ref|YP_001403460.1| - 9.7e-14 51.0 0.1 2.3e-13 49.8 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.1 gi|154149842|ref|YP_001403460.1| - 1.3e-09 37.5 0.0 0.0025 17.6 0.0 3.8 3 0 0 3 3 3 2 PAS domain PAS_11 PF14598.1 gi|154149842|ref|YP_001403460.1| - 4e-09 36.4 0.0 0.0002 21.2 0.0 2.5 2 0 0 2 2 2 2 PAS domain PAS_10 PF13596.1 gi|154149842|ref|YP_001403460.1| - 0.00029 21.0 0.0 0.041 14.1 0.0 2.9 3 0 0 3 3 3 1 PAS domain PAS_7 PF12860.2 gi|154149842|ref|YP_001403460.1| - 0.00043 20.2 0.2 0.0083 16.1 0.0 3.0 3 0 0 3 3 3 1 PAS fold HATPase_c_3 PF13589.1 gi|154149842|ref|YP_001403460.1| - 0.00085 18.9 0.0 0.0019 17.8 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.20 gi|154149842|ref|YP_001403460.1| - 0.051 13.5 0.5 0.38 10.7 0.0 2.7 2 0 0 2 2 2 0 His Kinase A (phospho-acceptor) domain LysM PF01476.15 gi|154149842|ref|YP_001403460.1| - 0.1 12.5 0.0 0.52 10.2 0.0 2.3 2 0 0 2 2 2 0 LysM domain Methyltransf_31 PF13847.1 gi|154149843|ref|YP_001403461.1| - 1.3e-14 54.0 0.0 3.6e-13 49.3 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|154149843|ref|YP_001403461.1| - 1.5e-13 51.2 0.0 4e-13 49.9 0.0 1.7 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|154149843|ref|YP_001403461.1| - 9.7e-11 42.0 0.0 1.8e-10 41.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.9 gi|154149843|ref|YP_001403461.1| - 5.2e-10 38.8 0.0 6.9e-10 38.4 0.0 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_23 PF13489.1 gi|154149843|ref|YP_001403461.1| - 8.2e-10 38.6 0.0 1.3e-09 37.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|154149843|ref|YP_001403461.1| - 1.7e-08 34.8 0.0 3.3e-08 33.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|154149843|ref|YP_001403461.1| - 6.4e-07 29.6 0.0 1.2e-06 28.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|154149843|ref|YP_001403461.1| - 2.1e-06 27.1 0.0 3.1e-06 26.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_26 PF13659.1 gi|154149843|ref|YP_001403461.1| - 6.2e-06 26.2 0.0 1.1e-05 25.4 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain NodS PF05401.6 gi|154149843|ref|YP_001403461.1| - 1.6e-05 24.4 0.1 4.8e-05 22.8 0.0 1.7 2 0 0 2 2 2 1 Nodulation protein S (NodS) CMAS PF02353.15 gi|154149843|ref|YP_001403461.1| - 0.0008 18.5 0.0 0.0014 17.7 0.0 1.4 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Ubie_methyltran PF01209.13 gi|154149843|ref|YP_001403461.1| - 0.0013 17.9 0.0 0.0023 17.0 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family PrmA PF06325.8 gi|154149843|ref|YP_001403461.1| - 0.0094 15.1 0.0 0.014 14.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) FtsJ PF01728.14 gi|154149843|ref|YP_001403461.1| - 0.011 15.6 0.0 0.02 14.8 0.0 1.3 1 0 0 1 1 1 0 FtsJ-like methyltransferase Methyltransf_15 PF09445.5 gi|154149843|ref|YP_001403461.1| - 0.012 15.1 0.0 0.02 14.4 0.0 1.3 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase RrnaAD PF00398.15 gi|154149843|ref|YP_001403461.1| - 0.017 14.1 0.0 0.025 13.6 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase MetW PF07021.7 gi|154149843|ref|YP_001403461.1| - 0.019 14.3 0.1 0.073 12.4 0.0 1.9 1 1 0 2 2 2 0 Methionine biosynthesis protein MetW FmrO PF07091.6 gi|154149843|ref|YP_001403461.1| - 0.028 13.4 0.0 0.048 12.6 0.0 1.3 1 0 0 1 1 1 0 Ribosomal RNA methyltransferase (FmrO) Methyltransf_32 PF13679.1 gi|154149843|ref|YP_001403461.1| - 0.041 13.5 0.0 0.13 11.9 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_16 PF10294.4 gi|154149843|ref|YP_001403461.1| - 0.074 12.5 0.0 1.4 8.3 0.0 2.1 2 0 0 2 2 2 0 Putative methyltransferase GidB PF02527.10 gi|154149843|ref|YP_001403461.1| - 0.17 11.0 0.0 0.33 10.0 0.0 1.4 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G P-II PF00543.17 gi|154149844|ref|YP_001403462.1| - 9.8e-32 109.4 0.4 1.1e-31 109.3 0.3 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II DUF970 PF06153.6 gi|154149844|ref|YP_001403462.1| - 0.0037 17.2 0.1 0.37 10.7 0.0 2.4 2 1 0 2 2 2 2 Protein of unknown function (DUF970) Potass_KdpF PF09604.5 gi|154149844|ref|YP_001403462.1| - 0.021 14.6 0.3 0.036 13.8 0.2 1.4 1 0 0 1 1 1 0 F subunit of K+-transporting ATPase (Potass_KdpF) Nexin_C PF08628.7 gi|154149844|ref|YP_001403462.1| - 0.093 12.8 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Sorting nexin C terminal Aminotran_5 PF00266.14 gi|154149845|ref|YP_001403463.1| - 1.1e-61 208.6 0.0 1.3e-61 208.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.12 gi|154149845|ref|YP_001403463.1| - 8.6e-05 21.7 0.5 0.00016 20.8 0.3 1.3 1 1 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.15 gi|154149845|ref|YP_001403463.1| - 0.011 14.0 0.0 0.017 13.4 0.0 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme TauE PF01925.14 gi|154149849|ref|YP_001403467.1| - 8.7e-42 143.2 42.7 1.1e-41 142.9 29.6 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE Metallophos_C PF14008.1 gi|154149850|ref|YP_001403468.1| - 0.06 13.4 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Iron/zinc purple acid phosphatase-like protein C DUF3244 PF11589.3 gi|154149850|ref|YP_001403468.1| - 0.093 12.4 0.1 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3244) Ribonucleas_3_3 PF14622.1 gi|154149851|ref|YP_001403469.1| - 5.5e-15 55.4 0.0 6.7e-15 55.1 0.0 1.1 1 0 0 1 1 1 1 Ribonuclease-III-like Ribonuclease_3 PF00636.21 gi|154149851|ref|YP_001403469.1| - 2.7e-09 37.4 0.0 4.1e-09 36.8 0.0 1.3 1 0 0 1 1 1 1 Ribonuclease III domain His_Phos_1 PF00300.17 gi|154149852|ref|YP_001403470.1| - 5.2e-17 62.3 0.0 2.4e-16 60.2 0.0 1.8 1 1 1 2 2 2 1 Histidine phosphatase superfamily (branch 1) Isochorismatase PF00857.15 gi|154149853|ref|YP_001403471.1| - 2.6e-38 131.6 0.0 3.5e-38 131.2 0.0 1.2 1 0 0 1 1 1 1 Isochorismatase family Acetyltransf_1 PF00583.19 gi|154149853|ref|YP_001403471.1| - 9.4e-09 35.1 0.1 2.5e-08 33.8 0.0 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.1 gi|154149853|ref|YP_001403471.1| - 5.6e-06 26.5 0.0 1.1e-05 25.6 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.1 gi|154149853|ref|YP_001403471.1| - 0.00025 21.1 0.0 0.00068 19.7 0.0 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|154149853|ref|YP_001403471.1| - 0.0029 17.7 0.0 0.0069 16.4 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|154149853|ref|YP_001403471.1| - 0.042 13.6 0.0 0.11 12.2 0.0 1.8 1 0 0 1 1 1 0 FR47-like protein Acetyltransf_8 PF13523.1 gi|154149853|ref|YP_001403471.1| - 0.1 12.4 0.0 0.98 9.2 0.0 2.4 1 1 1 2 2 2 0 Acetyltransferase (GNAT) domain Rubredoxin PF00301.15 gi|154149854|ref|YP_001403472.1| - 2.8e-19 68.7 1.7 3.1e-19 68.5 1.2 1.0 1 0 0 1 1 1 1 Rubredoxin zf-ribbon_3 PF13248.1 gi|154149854|ref|YP_001403472.1| - 0.044 12.9 3.0 1.4 8.2 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain DUF35_N PF12172.3 gi|154149854|ref|YP_001403472.1| - 0.065 13.1 1.2 8.5 6.4 0.0 2.2 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Zn-ribbon_8 PF09723.5 gi|154149854|ref|YP_001403472.1| - 0.078 12.9 1.6 1.5 8.8 0.2 2.2 2 0 0 2 2 2 0 Zinc ribbon domain DZR PF12773.2 gi|154149854|ref|YP_001403472.1| - 0.14 11.9 1.5 0.43 10.4 1.1 1.8 1 1 0 1 1 1 0 Double zinc ribbon DUF2752 PF10825.3 gi|154149854|ref|YP_001403472.1| - 0.17 11.9 0.9 0.45 10.5 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2752) TFIIS_C PF01096.13 gi|154149854|ref|YP_001403472.1| - 0.18 11.4 1.6 0.95 9.1 0.2 2.0 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zf-RanBP PF00641.13 gi|154149854|ref|YP_001403472.1| - 1.1 8.3 4.6 0.66 9.1 0.4 2.1 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others PHD PF00628.24 gi|154149854|ref|YP_001403472.1| - 1.1 8.9 3.7 15 5.4 2.5 2.0 1 1 0 1 1 1 0 PHD-finger UPF0547 PF10571.4 gi|154149854|ref|YP_001403472.1| - 2.3 8.0 5.8 14 5.4 0.2 2.5 3 0 0 3 3 3 0 Uncharacterised protein family UPF0547 Wzz PF02706.10 gi|154149855|ref|YP_001403473.1| - 0.081 12.7 0.3 0.11 12.2 0.2 1.5 1 1 0 1 1 1 0 Chain length determinant protein Response_reg PF00072.19 gi|154149856|ref|YP_001403474.1| - 5e-21 74.8 0.1 1e-19 70.5 0.0 2.5 2 0 0 2 2 2 1 Response regulator receiver domain HATPase_c PF02518.21 gi|154149856|ref|YP_001403474.1| - 4.5e-14 52.1 0.1 1.1e-13 50.8 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GAF_2 PF13185.1 gi|154149856|ref|YP_001403474.1| - 1.2e-13 51.8 0.0 2.7e-13 50.6 0.0 1.6 1 0 0 1 1 1 1 GAF domain PAS_9 PF13426.1 gi|154149856|ref|YP_001403474.1| - 7.9e-09 35.8 0.0 1.9e-08 34.6 0.0 1.7 1 0 0 1 1 1 1 PAS domain PAS_8 PF13188.1 gi|154149856|ref|YP_001403474.1| - 1.3e-06 28.0 0.0 3.4e-06 26.7 0.0 1.7 1 0 0 1 1 1 1 PAS domain PAS PF00989.19 gi|154149856|ref|YP_001403474.1| - 7.3e-05 22.5 0.0 0.00017 21.3 0.0 1.7 1 0 0 1 1 1 1 PAS fold SPOB_a PF14689.1 gi|154149856|ref|YP_001403474.1| - 0.0012 18.3 0.0 0.0029 17.1 0.0 1.6 1 0 0 1 1 1 1 Sensor_kinase_SpoOB-type, alpha-helical domain PAS_4 PF08448.5 gi|154149856|ref|YP_001403474.1| - 0.0028 17.6 0.0 0.0077 16.2 0.0 1.8 1 1 0 1 1 1 1 PAS fold GAF_3 PF13492.1 gi|154149856|ref|YP_001403474.1| - 0.0035 17.4 0.0 0.0075 16.3 0.0 1.6 1 0 0 1 1 1 1 GAF domain HATPase_c_3 PF13589.1 gi|154149856|ref|YP_001403474.1| - 0.041 13.5 0.0 0.1 12.2 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.1 gi|154149856|ref|YP_001403474.1| - 0.051 13.3 0.0 0.12 12.1 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain NPCBM_assoc PF10633.4 gi|154149857|ref|YP_001403475.1| - 0.65 10.0 0.0 0.65 10.0 0.0 4.8 5 2 1 6 6 6 0 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF3494 PF11999.3 gi|154149858|ref|YP_001403476.1| - 3.7e-66 222.6 15.2 8.8e-66 221.4 10.5 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF3494) TALPID3 PF15324.1 gi|154149858|ref|YP_001403476.1| - 0.56 7.4 5.1 0.7 7.1 3.5 1.0 1 0 0 1 1 1 0 Hedgehog signalling target PLRV_ORF5 PF01690.12 gi|154149858|ref|YP_001403476.1| - 0.82 8.7 8.6 1.2 8.2 6.0 1.1 1 0 0 1 1 1 0 Potato leaf roll virus readthrough protein adh_short_C2 PF13561.1 gi|154149859|ref|YP_001403477.1| - 0.066 12.9 0.0 0.081 12.6 0.0 1.2 1 0 0 1 1 1 0 Enoyl-(Acyl carrier protein) reductase PapC_C PF13953.1 gi|154149859|ref|YP_001403477.1| - 0.17 11.5 0.7 0.45 10.1 0.1 2.0 2 1 0 2 2 2 0 PapC C-terminal domain PKD PF00801.15 gi|154149860|ref|YP_001403478.1| - 3.5e-13 49.0 0.5 3.5e-13 49.0 0.3 3.0 3 1 0 3 3 3 1 PKD domain Cpn60_TCP1 PF00118.19 gi|154149862|ref|YP_001403480.1| - 1.6e-163 544.7 13.0 1.9e-163 544.6 9.0 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family S-AdoMet_synt_N PF00438.15 gi|154149862|ref|YP_001403480.1| - 0.042 14.0 0.2 2.9 8.1 0.0 2.8 2 0 0 2 2 2 0 S-adenosylmethionine synthetase, N-terminal domain Pro_CA PF00484.14 gi|154149863|ref|YP_001403481.1| - 6.5e-43 146.3 0.0 7.6e-43 146.1 0.0 1.1 1 0 0 1 1 1 1 Carbonic anhydrase Eno-Rase_FAD_bd PF07055.7 gi|154149863|ref|YP_001403481.1| - 0.0082 16.0 0.3 0.017 15.0 0.2 1.5 1 0 0 1 1 1 1 Enoyl reductase FAD binding domain ODC_AZ PF02100.12 gi|154149863|ref|YP_001403481.1| - 0.049 13.1 0.0 0.077 12.4 0.0 1.3 1 0 0 1 1 1 0 Ornithine decarboxylase antizyme DUF2099 PF09872.4 gi|154149865|ref|YP_001403483.1| - 2.2e-101 338.2 0.4 2.6e-101 338.0 0.2 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2099) Cpn60_TCP1 PF00118.19 gi|154149867|ref|YP_001403485.1| - 6.8e-151 503.1 13.4 7.8e-151 502.9 9.3 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family PGA_cap PF09587.5 gi|154149867|ref|YP_001403485.1| - 0.0076 15.6 0.1 0.015 14.6 0.1 1.4 1 0 0 1 1 1 1 Bacterial capsule synthesis protein PGA_cap Nitro_FeMo-Co PF02579.12 gi|154149867|ref|YP_001403485.1| - 0.063 13.3 0.1 0.18 11.9 0.1 1.7 1 0 0 1 1 1 0 Dinitrogenase iron-molybdenum cofactor TPR_11 PF13414.1 gi|154149868|ref|YP_001403486.1| - 2.1e-53 177.8 12.8 9.2e-17 60.4 0.2 3.1 1 1 3 4 4 4 4 TPR repeat TPR_1 PF00515.23 gi|154149868|ref|YP_001403486.1| - 6.3e-36 120.5 1.6 6.3e-10 38.2 0.3 4.2 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_2 PF07719.12 gi|154149868|ref|YP_001403486.1| - 1.8e-30 102.3 2.8 4.8e-08 32.3 0.3 4.1 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_12 PF13424.1 gi|154149868|ref|YP_001403486.1| - 5.7e-26 90.2 2.0 6.6e-12 45.2 0.0 2.6 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.1 gi|154149868|ref|YP_001403486.1| - 1.1e-21 74.9 0.1 2.7e-06 26.7 0.0 4.3 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_16 PF13432.1 gi|154149868|ref|YP_001403486.1| - 1.6e-21 76.4 9.7 1.1e-07 32.2 0.8 3.0 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_17 PF13431.1 gi|154149868|ref|YP_001403486.1| - 3.4e-20 70.4 1.3 1.9e-06 27.5 0.3 4.4 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_14 PF13428.1 gi|154149868|ref|YP_001403486.1| - 1.9e-17 62.1 1.7 0.00014 22.1 0.3 4.0 1 1 3 4 4 4 4 Tetratricopeptide repeat TPR_9 PF13371.1 gi|154149868|ref|YP_001403486.1| - 2.3e-13 49.7 0.3 0.00011 21.9 0.0 3.1 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_19 PF14559.1 gi|154149868|ref|YP_001403486.1| - 2.9e-11 43.5 0.2 1.8e-05 24.9 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_6 PF13174.1 gi|154149868|ref|YP_001403486.1| - 1.2e-07 31.7 0.2 0.94 10.0 0.1 4.1 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_7 PF13176.1 gi|154149868|ref|YP_001403486.1| - 1.8e-06 27.3 0.0 0.089 12.6 0.0 4.1 4 0 0 4 4 4 1 Tetratricopeptide repeat BTAD PF03704.12 gi|154149868|ref|YP_001403486.1| - 8.8e-05 22.8 0.0 0.014 15.7 0.0 2.1 1 1 1 2 2 2 1 Bacterial transcriptional activator domain DUF3856 PF12968.2 gi|154149868|ref|YP_001403486.1| - 0.00023 20.9 0.2 0.23 11.3 0.1 3.7 2 1 1 3 3 3 1 Domain of Unknown Function (DUF3856) TPR_10 PF13374.1 gi|154149868|ref|YP_001403486.1| - 0.0056 16.5 6.5 1.9 8.5 1.1 3.7 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_4 PF07721.9 gi|154149868|ref|YP_001403486.1| - 0.029 14.7 1.4 12 6.6 0.0 3.2 3 1 0 3 3 3 0 Tetratricopeptide repeat NARP1 PF12569.3 gi|154149868|ref|YP_001403486.1| - 0.029 13.1 0.0 5.1 5.7 0.0 2.1 1 1 1 2 2 2 0 NMDA receptor-regulated protein 1 TPR_15 PF13429.1 gi|154149868|ref|YP_001403486.1| - 0.064 12.3 0.1 1 8.3 0.0 2.3 1 1 2 3 3 3 0 Tetratricopeptide repeat Apc3 PF12895.2 gi|154149868|ref|YP_001403486.1| - 0.12 12.5 0.2 7.8 6.7 0.0 2.5 2 1 0 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 TBP PF00352.16 gi|154149870|ref|YP_001403488.1| - 5.9e-57 189.0 0.4 2.6e-29 100.4 0.1 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.3 gi|154149870|ref|YP_001403488.1| - 5.2e-05 23.2 0.0 0.11 12.6 0.0 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) Ribosomal_S17e PF00833.13 gi|154149871|ref|YP_001403489.1| - 7.4e-11 41.8 0.3 8e-11 41.7 0.2 1.0 1 0 0 1 1 1 1 Ribosomal S17 DUF137 PF02006.11 gi|154149872|ref|YP_001403490.1| - 0.031 13.6 0.2 0.034 13.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF137 bPH_6 PF10756.4 gi|154149872|ref|YP_001403490.1| - 0.096 12.5 0.8 3.8 7.4 0.5 2.4 1 1 0 1 1 1 0 Bacterial PH domain BRK PF07533.11 gi|154149872|ref|YP_001403490.1| - 0.6 9.6 2.3 6.4 6.3 0.1 2.6 2 1 1 3 3 3 0 BRK domain CheB_methylest PF01339.12 gi|154149874|ref|YP_001403492.1| - 2.9e-60 202.8 0.1 7.3e-60 201.5 0.0 1.7 2 0 0 2 2 1 1 CheB methylesterase CheR PF01739.13 gi|154149874|ref|YP_001403492.1| - 1.2e-54 184.5 0.0 2e-54 183.8 0.0 1.4 1 0 0 1 1 1 1 CheR methyltransferase, SAM binding domain PAS_10 PF13596.1 gi|154149874|ref|YP_001403492.1| - 1.2e-28 99.4 0.0 5.8e-24 84.4 0.0 3.6 3 0 0 3 3 3 1 PAS domain PAS_4 PF08448.5 gi|154149874|ref|YP_001403492.1| - 6.8e-16 58.2 0.1 5.3e-09 36.0 0.0 3.9 3 0 0 3 3 3 2 PAS fold PAS PF00989.19 gi|154149874|ref|YP_001403492.1| - 5.8e-15 55.0 0.2 2.5e-10 40.1 0.0 4.1 3 1 0 3 3 3 1 PAS fold PAS_9 PF13426.1 gi|154149874|ref|YP_001403492.1| - 4.6e-12 46.2 0.0 5.6e-07 29.8 0.0 3.7 3 0 0 3 3 3 2 PAS domain CheR_N PF03705.10 gi|154149874|ref|YP_001403492.1| - 8.8e-12 44.2 0.3 2.2e-11 42.9 0.2 1.7 1 0 0 1 1 1 1 CheR methyltransferase, all-alpha domain WEMBL PF05701.6 gi|154149874|ref|YP_001403492.1| - 7.3e-05 21.4 9.4 0.00011 20.7 6.5 1.2 1 0 0 1 1 1 1 Weak chloroplast movement under blue light PAS_8 PF13188.1 gi|154149874|ref|YP_001403492.1| - 0.00038 20.2 0.0 0.0024 17.6 0.0 2.3 2 0 0 2 2 1 1 PAS domain CENP-F_leu_zip PF10473.4 gi|154149874|ref|YP_001403492.1| - 0.00045 20.0 20.5 0.00087 19.1 14.2 1.4 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 IncA PF04156.9 gi|154149874|ref|YP_001403492.1| - 0.0012 18.4 16.4 0.0023 17.5 11.3 1.4 1 0 0 1 1 1 1 IncA protein AIP3 PF03915.8 gi|154149874|ref|YP_001403492.1| - 0.0015 17.5 5.0 0.0025 16.8 3.5 1.2 1 0 0 1 1 1 1 Actin interacting protein 3 CENP-Q PF13094.1 gi|154149874|ref|YP_001403492.1| - 0.0032 17.4 14.1 0.0057 16.6 9.8 1.3 1 0 0 1 1 1 1 CENP-Q, a CENPA-CAD centromere complex subunit Fez1 PF06818.10 gi|154149874|ref|YP_001403492.1| - 0.0037 17.3 8.2 0.011 15.8 5.8 1.7 2 0 0 2 2 1 1 Fez1 Spc7 PF08317.6 gi|154149874|ref|YP_001403492.1| - 0.0047 15.6 13.8 0.0091 14.6 9.5 1.3 1 0 0 1 1 1 1 Spc7 kinetochore protein Exonuc_VII_L PF02601.10 gi|154149874|ref|YP_001403492.1| - 0.011 14.9 5.7 0.019 14.1 4.0 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit Atg14 PF10186.4 gi|154149874|ref|YP_001403492.1| - 0.014 14.3 6.3 0.022 13.6 4.3 1.2 1 0 0 1 1 1 0 UV radiation resistance protein and autophagy-related subunit 14 DUF1664 PF07889.7 gi|154149874|ref|YP_001403492.1| - 0.021 14.6 6.6 0.062 13.0 4.5 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) AAA_13 PF13166.1 gi|154149874|ref|YP_001403492.1| - 0.026 13.0 8.7 0.038 12.4 6.0 1.1 1 0 0 1 1 1 0 AAA domain DUF812 PF05667.6 gi|154149874|ref|YP_001403492.1| - 0.026 13.0 8.6 0.045 12.2 6.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF812) Tropomyosin PF00261.15 gi|154149874|ref|YP_001403492.1| - 0.045 12.8 15.1 0.09 11.8 10.5 1.4 1 0 0 1 1 1 0 Tropomyosin V_ATPase_I PF01496.14 gi|154149874|ref|YP_001403492.1| - 0.056 11.3 6.2 0.085 10.7 4.3 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Arfaptin PF06456.8 gi|154149874|ref|YP_001403492.1| - 0.075 12.3 6.0 0.064 12.5 0.4 2.3 1 1 1 2 2 2 0 Arfaptin-like domain Mnd1 PF03962.10 gi|154149874|ref|YP_001403492.1| - 0.076 12.6 9.4 0.15 11.6 6.5 1.4 1 0 0 1 1 1 0 Mnd1 family XRCC4 PF06632.7 gi|154149874|ref|YP_001403492.1| - 0.08 11.7 6.2 0.14 10.9 4.3 1.3 1 0 0 1 1 1 0 DNA double-strand break repair and V(D)J recombination protein XRCC4 DUF3584 PF12128.3 gi|154149874|ref|YP_001403492.1| - 0.082 10.2 11.2 0.13 9.6 7.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) DUF3552 PF12072.3 gi|154149874|ref|YP_001403492.1| - 0.087 12.0 14.7 0.17 11.0 10.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) Sec8_exocyst PF04048.9 gi|154149874|ref|YP_001403492.1| - 0.088 12.4 7.8 0.21 11.2 5.4 1.6 1 0 0 1 1 1 0 Sec8 exocyst complex component specific domain ATG16 PF08614.6 gi|154149874|ref|YP_001403492.1| - 0.15 11.8 21.5 0.26 11.1 14.9 1.3 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) DUF3450 PF11932.3 gi|154149874|ref|YP_001403492.1| - 0.17 11.1 10.9 0.31 10.2 7.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) TPR_MLP1_2 PF07926.7 gi|154149874|ref|YP_001403492.1| - 0.18 11.5 18.4 0.43 10.3 12.8 1.6 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein IFT57 PF10498.4 gi|154149874|ref|YP_001403492.1| - 0.23 10.1 13.1 0.39 9.4 9.1 1.3 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 Sugarporin_N PF11471.3 gi|154149874|ref|YP_001403492.1| - 0.25 11.0 16.1 0.061 12.9 2.6 3.1 1 1 2 3 3 3 0 Maltoporin periplasmic N-terminal extension Sec20 PF03908.8 gi|154149874|ref|YP_001403492.1| - 0.26 11.0 6.6 0.58 9.8 4.6 1.6 1 0 0 1 1 1 0 Sec20 Laminin_II PF06009.7 gi|154149874|ref|YP_001403492.1| - 0.29 10.9 14.3 1.8 8.3 9.9 2.1 1 1 0 1 1 1 0 Laminin Domain II DUF342 PF03961.8 gi|154149874|ref|YP_001403492.1| - 0.29 9.5 7.6 0.49 8.7 5.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF342) APG6 PF04111.7 gi|154149874|ref|YP_001403492.1| - 0.3 10.1 14.4 0.52 9.3 10.0 1.3 1 0 0 1 1 1 0 Autophagy protein Apg6 Syntaxin-6_N PF09177.6 gi|154149874|ref|YP_001403492.1| - 0.33 11.3 9.9 3.6 8.0 5.5 3.2 2 1 1 3 3 3 0 Syntaxin 6, N-terminal TMF_TATA_bd PF12325.3 gi|154149874|ref|YP_001403492.1| - 0.38 10.4 16.3 0.76 9.5 11.3 1.4 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding Cytochrom_B562 PF07361.6 gi|154149874|ref|YP_001403492.1| - 0.4 11.1 8.1 3.6 8.0 6.5 1.9 2 0 0 2 2 1 0 Cytochrome b562 FliD_N PF02465.13 gi|154149874|ref|YP_001403492.1| - 0.45 10.8 7.5 1.7 9.0 5.0 2.2 2 1 0 2 2 1 0 Flagellar hook-associated protein 2 N-terminus ADIP PF11559.3 gi|154149874|ref|YP_001403492.1| - 0.47 10.3 14.8 1 9.2 10.2 1.6 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding HAUS-augmin3 PF14932.1 gi|154149874|ref|YP_001403492.1| - 0.53 9.4 14.5 1.8 7.6 10.1 1.8 2 0 0 2 2 2 0 HAUS augmin-like complex subunit 3 AAA_23 PF13476.1 gi|154149874|ref|YP_001403492.1| - 0.58 10.4 10.6 1.2 9.4 7.3 1.5 1 0 0 1 1 1 0 AAA domain DUF904 PF06005.7 gi|154149874|ref|YP_001403492.1| - 0.61 10.4 21.8 89 3.4 15.1 2.5 1 1 0 1 1 1 0 Protein of unknown function (DUF904) COG5 PF10392.4 gi|154149874|ref|YP_001403492.1| - 0.81 9.6 8.3 1.8 8.5 5.7 1.5 1 0 0 1 1 1 0 Golgi transport complex subunit 5 MCC-bdg_PDZ PF10506.4 gi|154149874|ref|YP_001403492.1| - 0.83 9.5 9.8 17 5.3 6.5 2.8 2 1 0 2 2 1 0 PDZ domain of MCC-2 bdg protein for Usher syndrome Reo_sigmaC PF04582.7 gi|154149874|ref|YP_001403492.1| - 0.92 8.6 3.9 1.8 7.6 2.7 1.4 1 0 0 1 1 1 0 Reovirus sigma C capsid protein zf-C4H2 PF10146.4 gi|154149874|ref|YP_001403492.1| - 1.3 8.9 10.0 3 7.8 6.9 1.5 1 0 0 1 1 1 0 Zinc finger-containing protein Peptidase_C6 PF00851.13 gi|154149874|ref|YP_001403492.1| - 1.7 7.1 6.4 2.8 6.4 4.4 1.2 1 0 0 1 1 1 0 Helper component proteinase COG2 PF06148.6 gi|154149874|ref|YP_001403492.1| - 1.8 8.4 14.7 2.8 7.8 8.3 2.5 2 1 0 2 2 1 0 COG (conserved oligomeric Golgi) complex component, COG2 Baculo_gp64 PF03273.8 gi|154149874|ref|YP_001403492.1| - 2 6.5 4.6 6.1 4.8 1.6 2.0 1 1 1 2 2 2 0 Baculovirus gp64 envelope glycoprotein family Seryl_tRNA_N PF02403.17 gi|154149874|ref|YP_001403492.1| - 2.1 8.3 17.1 9.7 6.2 11.5 2.3 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain RE_Alw26IDE PF09665.5 gi|154149874|ref|YP_001403492.1| - 2.4 6.7 5.7 3.4 6.2 3.4 1.6 2 0 0 2 2 1 0 Type II restriction endonuclease (RE_Alw26IDE) Phage_GP20 PF06810.6 gi|154149874|ref|YP_001403492.1| - 3.5 7.0 17.8 1.9 7.9 8.9 2.4 1 1 1 2 2 2 0 Phage minor structural protein GP20 RmuC PF02646.11 gi|154149874|ref|YP_001403492.1| - 3.8 6.2 17.1 3.2 6.5 4.7 2.5 1 1 1 2 2 2 0 RmuC family WXG100 PF06013.7 gi|154149874|ref|YP_001403492.1| - 7.9 6.5 12.4 4.5 7.3 5.0 2.5 1 1 1 2 2 2 0 Proteins of 100 residues with WXG DivIC PF04977.10 gi|154149874|ref|YP_001403492.1| - 9.1 5.8 19.1 32 4.0 8.2 3.1 1 1 1 2 2 2 0 Septum formation initiator Flagellin_N PF00669.15 gi|154149874|ref|YP_001403492.1| - 9.4 6.0 14.5 9.5 6.0 8.2 2.3 2 1 0 2 2 1 0 Bacterial flagellin N-terminal helical region DUF4200 PF13863.1 gi|154149874|ref|YP_001403492.1| - 9.4 6.1 18.9 29 4.6 13.1 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) DUF745 PF05335.8 gi|154149874|ref|YP_001403492.1| - 9.5 5.6 15.0 22 4.4 10.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF745) LMBR1 PF04791.11 gi|154149874|ref|YP_001403492.1| - 9.5 4.6 8.3 14 4.0 5.8 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein PAS_9 PF13426.1 gi|154149875|ref|YP_001403493.1| - 4e-09 36.7 0.0 6.4e-08 32.9 0.0 2.8 3 1 0 3 3 3 1 PAS domain HATPase_c PF02518.21 gi|154149875|ref|YP_001403493.1| - 8.2e-05 22.2 0.0 0.00018 21.2 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS PF00989.19 gi|154149875|ref|YP_001403493.1| - 0.0011 18.7 0.2 0.9 9.3 0.0 2.8 2 1 1 3 3 3 2 PAS fold HisKA PF00512.20 gi|154149875|ref|YP_001403493.1| - 0.0064 16.4 1.1 0.014 15.4 0.0 2.1 3 0 0 3 3 3 1 His Kinase A (phospho-acceptor) domain Val_tRNA-synt_C PF10458.4 gi|154149875|ref|YP_001403493.1| - 0.12 12.5 0.1 0.29 11.2 0.1 1.7 1 0 0 1 1 1 0 Valyl tRNA synthetase tRNA binding arm TusA PF01206.12 gi|154149876|ref|YP_001403494.1| - 1.1e-18 66.6 0.1 1.2e-18 66.4 0.1 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA DUF2249 PF10006.4 gi|154149876|ref|YP_001403494.1| - 1.5e-05 24.4 0.0 3.9e-05 23.1 0.0 1.6 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2249) PAS_9 PF13426.1 gi|154149877|ref|YP_001403495.1| - 1.7e-31 108.6 0.0 1.8e-15 57.1 0.0 3.3 4 0 0 4 4 4 2 PAS domain PAS PF00989.19 gi|154149877|ref|YP_001403495.1| - 1.6e-27 95.5 0.0 3.5e-14 52.5 0.0 3.1 3 0 0 3 3 3 2 PAS fold PAS_4 PF08448.5 gi|154149877|ref|YP_001403495.1| - 2.9e-25 88.4 0.0 3.8e-14 52.6 0.0 2.9 3 0 0 3 3 3 2 PAS fold Response_reg PF00072.19 gi|154149877|ref|YP_001403495.1| - 1.8e-20 73.0 0.0 6.8e-20 71.1 0.0 2.0 2 0 0 2 2 2 1 Response regulator receiver domain PAS_8 PF13188.1 gi|154149877|ref|YP_001403495.1| - 2.3e-17 62.1 0.0 4.9e-09 35.7 0.0 2.8 2 0 0 2 2 2 2 PAS domain PAS_3 PF08447.6 gi|154149877|ref|YP_001403495.1| - 1e-15 57.5 0.0 3.1e-13 49.6 0.0 3.4 3 1 0 3 3 3 1 PAS fold HATPase_c PF02518.21 gi|154149877|ref|YP_001403495.1| - 6.5e-13 48.3 0.0 1.7e-12 47.0 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_7 PF12860.2 gi|154149877|ref|YP_001403495.1| - 7.1e-09 35.6 1.3 8.2e-05 22.5 0.0 4.0 4 1 0 4 4 3 2 PAS fold PAS_10 PF13596.1 gi|154149877|ref|YP_001403495.1| - 2e-05 24.7 0.0 0.041 14.1 0.0 2.8 2 1 1 3 3 3 2 PAS domain HisKA PF00512.20 gi|154149877|ref|YP_001403495.1| - 0.0048 16.8 0.0 0.023 14.6 0.0 2.2 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain HATPase_c_5 PF14501.1 gi|154149877|ref|YP_001403495.1| - 0.083 12.6 0.0 0.21 11.2 0.0 1.6 1 0 0 1 1 1 0 GHKL domain PEP-utilisers_N PF05524.8 gi|154149877|ref|YP_001403495.1| - 0.11 12.2 1.0 4.9 6.9 0.0 2.7 3 0 0 3 3 3 0 PEP-utilising enzyme, N-terminal Response_reg PF00072.19 gi|154149878|ref|YP_001403496.1| - 4.2e-23 81.5 0.0 5.1e-23 81.2 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain PAS_9 PF13426.1 gi|154149879|ref|YP_001403497.1| - 8.9e-29 99.9 0.6 1.9e-08 34.6 0.0 3.7 4 0 0 4 4 4 3 PAS domain PAS PF00989.19 gi|154149879|ref|YP_001403497.1| - 5.7e-24 84.0 0.3 1.1e-07 31.6 0.0 3.3 3 0 0 3 3 3 3 PAS fold PAS_8 PF13188.1 gi|154149879|ref|YP_001403497.1| - 1.6e-23 81.6 0.1 5.4e-08 32.4 0.0 3.9 4 0 0 4 4 4 3 PAS domain PAS_4 PF08448.5 gi|154149879|ref|YP_001403497.1| - 1.8e-17 63.3 0.0 2.5e-05 24.2 0.0 3.8 3 1 0 3 3 3 3 PAS fold PAS_3 PF08447.6 gi|154149879|ref|YP_001403497.1| - 2.1e-14 53.3 0.1 1.2e-06 28.4 0.0 2.9 2 0 0 2 2 2 2 PAS fold PAS_7 PF12860.2 gi|154149879|ref|YP_001403497.1| - 5.8e-05 23.0 0.1 0.06 13.3 0.0 4.1 5 0 0 5 5 5 1 PAS fold MEKHLA PF08670.6 gi|154149879|ref|YP_001403497.1| - 0.00039 19.9 0.0 0.27 10.7 0.0 2.3 2 0 0 2 2 2 2 MEKHLA domain TBPIP PF07106.8 gi|154149879|ref|YP_001403497.1| - 0.0015 18.0 0.0 0.0035 16.9 0.0 1.7 1 0 0 1 1 1 1 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) HTH_IclR PF09339.5 gi|154149879|ref|YP_001403497.1| - 0.004 16.6 0.0 0.011 15.2 0.0 1.7 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_38 PF13936.1 gi|154149879|ref|YP_001403497.1| - 0.0088 15.5 0.1 0.058 12.9 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.15 gi|154149879|ref|YP_001403497.1| - 0.019 14.6 0.0 0.043 13.4 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|154149879|ref|YP_001403497.1| - 0.026 14.3 0.0 0.081 12.7 0.0 1.8 2 0 0 2 2 1 0 Helix-turn-helix domain DUF3731 PF12531.3 gi|154149879|ref|YP_001403497.1| - 0.039 13.4 0.0 0.064 12.7 0.0 1.3 1 0 0 1 1 1 0 DNA-K related protein HARE-HTH PF05066.8 gi|154149879|ref|YP_001403497.1| - 0.067 13.5 0.1 0.25 11.7 0.0 1.9 2 0 0 2 2 1 0 HB1, ASXL, restriction endonuclease HTH domain RPA_C PF08784.6 gi|154149879|ref|YP_001403497.1| - 0.093 13.1 0.0 0.18 12.2 0.0 1.4 1 0 0 1 1 1 0 Replication protein A C terminal HTH_23 PF13384.1 gi|154149879|ref|YP_001403497.1| - 0.11 12.1 0.0 0.25 11.0 0.0 1.6 1 0 0 1 1 1 0 Homeodomain-like domain TM_helix PF05552.7 gi|154149880|ref|YP_001403498.1| - 8.7e-18 63.7 6.8 9.1e-12 44.4 0.6 3.7 4 0 0 4 4 4 2 Conserved TM helix PIG-P PF08510.7 gi|154149880|ref|YP_001403498.1| - 6.1 6.4 10.7 2.2 7.9 5.3 1.8 1 1 1 2 2 2 0 PIG-P PEGA PF08308.6 gi|154149881|ref|YP_001403499.1| - 8.9e-19 67.0 0.2 8.9e-19 67.0 0.1 1.8 2 1 0 2 2 2 1 PEGA domain TrbC PF04956.8 gi|154149881|ref|YP_001403499.1| - 0.47 10.5 8.2 2.3 8.2 0.5 2.4 2 1 0 2 2 2 0 TrbC/VIRB2 family SIMPL PF04402.9 gi|154149882|ref|YP_001403500.1| - 0.002 18.0 0.1 0.0028 17.5 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF541) TPR_14 PF13428.1 gi|154149882|ref|YP_001403500.1| - 0.011 16.3 0.5 5.8 7.8 0.0 2.7 3 0 0 3 3 3 0 Tetratricopeptide repeat RESP18 PF14948.1 gi|154149882|ref|YP_001403500.1| - 0.033 14.2 0.0 0.056 13.4 0.0 1.3 1 0 0 1 1 1 0 RESP18 domain EcKinase PF02958.15 gi|154149882|ref|YP_001403500.1| - 0.055 12.5 0.2 8.1 5.4 0.0 2.0 1 1 0 2 2 2 0 Ecdysteroid kinase Ins_allergen_rp PF06757.8 gi|154149882|ref|YP_001403500.1| - 0.12 11.8 0.0 9.7 5.6 0.0 2.1 2 0 0 2 2 2 0 Insect allergen related repeat, nitrile-specifier detoxification SBP_bac_1 PF01547.20 gi|154149882|ref|YP_001403500.1| - 1 9.0 6.1 0.47 10.1 0.5 2.0 1 1 0 2 2 2 0 Bacterial extracellular solute-binding protein Response_reg PF00072.19 gi|154149884|ref|YP_001403502.1| - 5.9e-22 77.7 0.0 1.3e-21 76.6 0.0 1.6 1 0 0 1 1 1 1 Response regulator receiver domain HATPase_c PF02518.21 gi|154149884|ref|YP_001403502.1| - 4.2e-13 48.9 0.0 1.1e-12 47.6 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GAF_2 PF13185.1 gi|154149884|ref|YP_001403502.1| - 9.6e-13 48.8 0.0 2e-12 47.8 0.0 1.6 1 0 0 1 1 1 1 GAF domain PAS_9 PF13426.1 gi|154149884|ref|YP_001403502.1| - 8.8e-11 42.1 0.0 6.7e-10 39.2 0.0 2.5 3 0 0 3 3 3 1 PAS domain PAS_3 PF08447.6 gi|154149884|ref|YP_001403502.1| - 4.3e-09 36.3 0.0 3.3e-08 33.5 0.0 2.5 3 0 0 3 3 3 1 PAS fold PAS PF00989.19 gi|154149884|ref|YP_001403502.1| - 4.4e-09 36.1 0.0 9.8e-09 35.0 0.0 1.6 1 0 0 1 1 1 1 PAS fold PAS_8 PF13188.1 gi|154149884|ref|YP_001403502.1| - 9.3e-07 28.4 0.1 2.4e-06 27.1 0.1 1.7 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.5 gi|154149884|ref|YP_001403502.1| - 9.5e-05 22.4 0.3 0.00028 20.8 0.1 1.9 2 0 0 2 2 2 1 PAS fold DUF1394 PF07159.7 gi|154149884|ref|YP_001403502.1| - 0.032 13.3 0.0 0.062 12.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1394) GAF_3 PF13492.1 gi|154149884|ref|YP_001403502.1| - 0.047 13.8 0.0 0.11 12.6 0.0 1.7 1 0 0 1 1 1 0 GAF domain Prominin PF05478.6 gi|154149884|ref|YP_001403502.1| - 0.42 8.0 0.7 0.52 7.7 0.0 1.4 2 0 0 2 2 2 0 Prominin PAS_9 PF13426.1 gi|154149885|ref|YP_001403503.1| - 1.2e-31 109.1 0.0 4.8e-12 46.1 0.0 3.8 4 0 0 4 4 4 3 PAS domain PAS_4 PF08448.5 gi|154149885|ref|YP_001403503.1| - 2.5e-25 88.6 0.0 7.9e-09 35.5 0.0 3.8 3 0 0 3 3 3 3 PAS fold PAS_8 PF13188.1 gi|154149885|ref|YP_001403503.1| - 2.3e-22 77.9 0.0 4.5e-09 35.8 0.0 3.7 3 0 0 3 3 3 3 PAS domain Response_reg PF00072.19 gi|154149885|ref|YP_001403503.1| - 6.4e-20 71.2 0.0 2.1e-19 69.6 0.0 1.9 1 1 0 1 1 1 1 Response regulator receiver domain PAS PF00989.19 gi|154149885|ref|YP_001403503.1| - 1.8e-19 69.6 0.0 3.1e-06 26.9 0.0 3.5 3 0 0 3 3 3 3 PAS fold HATPase_c PF02518.21 gi|154149885|ref|YP_001403503.1| - 1.4e-12 47.2 0.0 3.3e-12 46.1 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.20 gi|154149885|ref|YP_001403503.1| - 1.1e-07 31.7 0.1 6.3e-07 29.3 0.0 2.5 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS_3 PF08447.6 gi|154149885|ref|YP_001403503.1| - 0.013 15.6 0.0 6.2 6.9 0.0 2.9 3 0 0 3 3 3 0 PAS fold ST7 PF04184.7 gi|154149885|ref|YP_001403503.1| - 0.1 10.8 0.0 1.7 6.7 0.0 2.1 2 0 0 2 2 2 0 ST7 protein Syntaxin-6_N PF09177.6 gi|154149885|ref|YP_001403503.1| - 0.22 11.9 4.1 0.61 10.5 0.7 2.8 3 0 0 3 3 3 0 Syntaxin 6, N-terminal HALZ PF02183.13 gi|154149885|ref|YP_001403503.1| - 0.38 10.5 3.0 5.8 6.7 0.1 2.5 2 0 0 2 2 2 0 Homeobox associated leucine zipper Pyridox_oxidase PF01243.15 gi|154149886|ref|YP_001403504.1| - 5.8e-08 32.6 0.0 1.1e-07 31.7 0.0 1.4 2 0 0 2 2 2 1 Pyridoxamine 5'-phosphate oxidase C2 PF00168.25 gi|154149886|ref|YP_001403504.1| - 0.00021 21.0 0.1 0.00028 20.6 0.1 1.3 1 0 0 1 1 1 1 C2 domain HEAT_2 PF13646.1 gi|154149888|ref|YP_001403506.1| - 3.1e-21 75.4 0.4 3.8e-21 75.1 0.3 1.2 1 0 0 1 1 1 1 HEAT repeats HEAT_PBS PF03130.11 gi|154149888|ref|YP_001403506.1| - 7.4e-13 47.6 3.9 4.3e-06 26.6 0.0 3.4 3 1 1 4 4 4 2 PBS lyase HEAT-like repeat HEAT_EZ PF13513.1 gi|154149888|ref|YP_001403506.1| - 4e-09 36.6 1.7 0.0025 18.2 0.0 2.7 3 0 0 3 3 3 2 HEAT-like repeat HEAT PF02985.17 gi|154149888|ref|YP_001403506.1| - 1.8e-08 33.7 0.0 0.0048 16.8 0.0 2.3 2 0 0 2 2 2 2 HEAT repeat Arm PF00514.18 gi|154149888|ref|YP_001403506.1| - 0.027 14.2 0.0 2.2 8.2 0.0 2.3 1 1 1 2 2 2 0 Armadillo/beta-catenin-like repeat Vac14_Fab1_bd PF12755.2 gi|154149888|ref|YP_001403506.1| - 0.074 13.4 0.0 9.5 6.6 0.0 2.5 2 1 0 2 2 2 0 Vacuolar 14 Fab1-binding region TPR_4 PF07721.9 gi|154149888|ref|YP_001403506.1| - 2.2 8.9 5.9 2 9.1 0.1 2.8 3 0 0 3 3 3 0 Tetratricopeptide repeat Metallophos_2 PF12850.2 gi|154149889|ref|YP_001403507.1| - 5.2e-07 29.6 0.0 2.1e-06 27.6 0.0 1.8 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|154149889|ref|YP_001403507.1| - 0.00058 19.3 1.5 0.0038 16.6 0.2 2.3 2 0 0 2 2 2 1 Calcineurin-like phosphoesterase Fer4_16 PF13484.1 gi|154149890|ref|YP_001403508.1| - 2e-06 28.4 11.2 0.00045 20.9 2.6 2.4 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_9 PF13187.1 gi|154149890|ref|YP_001403508.1| - 2.5e-06 27.6 15.3 5.4e-06 26.5 10.6 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.22 gi|154149890|ref|YP_001403508.1| - 1.1e-05 24.7 22.9 0.00019 20.9 3.8 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|154149890|ref|YP_001403508.1| - 1.8e-05 24.9 13.7 0.00032 21.0 10.5 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Flavodoxin_5 PF12724.2 gi|154149890|ref|YP_001403508.1| - 0.00039 20.4 0.0 0.00057 19.8 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_1 PF00258.20 gi|154149890|ref|YP_001403508.1| - 0.0007 19.6 0.0 0.00098 19.1 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin Fer4_10 PF13237.1 gi|154149890|ref|YP_001403508.1| - 0.0011 18.7 16.7 0.0024 17.6 11.6 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|154149890|ref|YP_001403508.1| - 0.0064 16.5 4.6 0.0064 16.5 3.2 2.3 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|154149890|ref|YP_001403508.1| - 0.0071 16.1 4.9 0.0071 16.1 3.4 3.1 3 0 0 3 3 2 1 4Fe-4S binding domain Fer4_17 PF13534.1 gi|154149890|ref|YP_001403508.1| - 0.011 16.0 9.3 0.021 15.1 0.9 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|154149890|ref|YP_001403508.1| - 0.042 14.2 4.4 0.042 14.2 3.1 2.5 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|154149890|ref|YP_001403508.1| - 0.073 12.9 21.9 0.14 11.9 4.3 2.8 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|154149890|ref|YP_001403508.1| - 0.12 12.9 26.2 0.22 12.1 4.4 3.2 3 0 0 3 3 3 0 4Fe-4S binding domain Flavodoxin_4 PF12682.2 gi|154149890|ref|YP_001403508.1| - 0.14 11.5 0.0 10 5.4 0.0 2.2 2 0 0 2 2 2 0 Flavodoxin Fer4_4 PF12800.2 gi|154149890|ref|YP_001403508.1| - 6.2 7.4 21.2 0.43 11.0 4.3 2.7 3 0 0 3 3 2 0 4Fe-4S binding domain DUF1700 PF08006.6 gi|154149891|ref|YP_001403509.1| - 7.1e-33 113.4 0.0 9.8e-33 112.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1700) DUF2154 PF09922.4 gi|154149891|ref|YP_001403509.1| - 7.4e-05 22.4 0.1 0.00018 21.1 0.0 1.7 1 1 1 2 2 2 1 Cell wall-active antibiotics response protein (DUF2154) DUF4098 PF13345.1 gi|154149891|ref|YP_001403509.1| - 0.1 12.5 6.4 7.6 6.5 0.4 3.3 2 1 0 3 3 3 0 Domain of unknown function (DUF4098) PadR PF03551.9 gi|154149892|ref|YP_001403510.1| - 5.1e-24 83.8 0.2 7.2e-24 83.3 0.2 1.2 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family TrmB PF01978.14 gi|154149892|ref|YP_001403510.1| - 3.4e-05 23.4 0.0 4.7e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.1 gi|154149892|ref|YP_001403510.1| - 0.0023 18.2 0.0 0.004 17.4 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_34 PF13601.1 gi|154149892|ref|YP_001403510.1| - 0.0023 17.9 0.0 0.0031 17.5 0.0 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain PaaX PF07848.7 gi|154149892|ref|YP_001403510.1| - 0.0042 17.0 0.0 0.0065 16.4 0.0 1.3 1 0 0 1 1 1 1 PaaX-like protein Rrf2 PF02082.15 gi|154149892|ref|YP_001403510.1| - 0.0042 17.1 0.0 0.0056 16.7 0.0 1.2 1 0 0 1 1 1 1 Transcriptional regulator HxlR PF01638.12 gi|154149892|ref|YP_001403510.1| - 0.0044 16.6 0.0 0.0055 16.3 0.0 1.2 1 0 0 1 1 1 1 HxlR-like helix-turn-helix Penicillinase_R PF03965.11 gi|154149892|ref|YP_001403510.1| - 0.012 15.7 0.0 0.014 15.4 0.0 1.2 1 0 0 1 1 1 0 Penicillinase repressor HTH_5 PF01022.15 gi|154149892|ref|YP_001403510.1| - 0.016 14.8 0.0 0.027 14.1 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family TFIIE_alpha PF02002.12 gi|154149892|ref|YP_001403510.1| - 0.02 14.4 0.0 0.033 13.7 0.0 1.4 1 1 0 1 1 1 0 TFIIE alpha subunit HTH_IclR PF09339.5 gi|154149892|ref|YP_001403510.1| - 0.059 12.9 0.0 0.097 12.2 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_41 PF14502.1 gi|154149892|ref|YP_001403510.1| - 0.07 12.7 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_29 PF13551.1 gi|154149892|ref|YP_001403510.1| - 0.1 12.7 0.0 0.15 12.1 0.0 1.3 1 1 0 1 1 1 0 Winged helix-turn helix NTP_transf_2 PF01909.18 gi|154149893|ref|YP_001403511.1| - 8e-15 54.9 0.3 9.3e-15 54.7 0.2 1.1 1 0 0 1 1 1 1 Nucleotidyltransferase domain DNA_pol_B_palm PF14792.1 gi|154149893|ref|YP_001403511.1| - 0.022 14.8 0.0 0.024 14.6 0.0 1.2 1 0 0 1 1 1 0 DNA polymerase beta palm PIN PF01850.16 gi|154149894|ref|YP_001403512.1| - 4.9e-05 23.6 0.3 6.8e-05 23.1 0.2 1.2 1 0 0 1 1 1 1 PIN domain LTP_2 PF14368.1 gi|154149894|ref|YP_001403512.1| - 0.056 13.5 0.2 0.093 12.8 0.1 1.3 1 0 0 1 1 1 0 Probable lipid transfer Exo_endo_phos PF03372.18 gi|154149895|ref|YP_001403513.1| - 3.8e-21 76.1 0.0 4.5e-21 75.9 0.0 1.1 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.1 gi|154149895|ref|YP_001403513.1| - 5.3e-10 38.9 0.0 8.2e-10 38.3 0.0 1.3 1 0 0 1 1 1 1 Endonuclease-reverse transcriptase DUF2075 PF09848.4 gi|154149896|ref|YP_001403514.1| - 3.3e-76 256.5 0.0 4.1e-76 256.2 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_19 PF13245.1 gi|154149896|ref|YP_001403514.1| - 0.00061 19.4 0.0 0.0016 18.1 0.0 1.6 1 0 0 1 1 1 1 Part of AAA domain AAA_30 PF13604.1 gi|154149896|ref|YP_001403514.1| - 0.0034 16.9 0.0 0.0075 15.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain Zot PF05707.7 gi|154149896|ref|YP_001403514.1| - 0.009 15.4 0.0 0.026 14.0 0.0 1.7 1 1 0 1 1 1 1 Zonular occludens toxin (Zot) NERD PF08378.6 gi|154149896|ref|YP_001403514.1| - 0.011 16.0 0.0 0.027 14.7 0.0 1.7 1 0 0 1 1 1 0 Nuclease-related domain KaiC PF06745.8 gi|154149896|ref|YP_001403514.1| - 0.013 14.6 0.0 0.022 13.9 0.0 1.3 1 0 0 1 1 1 0 KaiC PDDEXK_4 PF14281.1 gi|154149896|ref|YP_001403514.1| - 0.035 13.9 0.0 0.087 12.6 0.0 1.6 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily AAA_22 PF13401.1 gi|154149896|ref|YP_001403514.1| - 0.091 12.8 0.0 0.76 9.9 0.0 2.3 1 1 0 1 1 1 0 AAA domain HSDR_N PF04313.9 gi|154149896|ref|YP_001403514.1| - 0.12 12.1 0.1 0.22 11.2 0.0 1.4 1 0 0 1 1 1 0 Type I restriction enzyme R protein N terminus (HSDR_N) DUF1232 PF06803.7 gi|154149897|ref|YP_001403515.1| - 2.7e-11 42.6 0.1 2.7e-11 42.6 0.1 2.1 3 0 0 3 3 3 1 Protein of unknown function (DUF1232) COQ7 PF03232.8 gi|154149899|ref|YP_001403517.1| - 0.021 14.3 0.1 0.092 12.2 0.1 2.1 1 0 0 1 1 1 0 Ubiquinone biosynthesis protein COQ7 CENP-F_leu_zip PF10473.4 gi|154149899|ref|YP_001403517.1| - 0.78 9.5 20.3 1.4 8.8 4.7 2.6 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 IncA PF04156.9 gi|154149899|ref|YP_001403517.1| - 0.8 9.2 19.0 0.8 9.2 2.8 2.4 2 0 0 2 2 2 0 IncA protein Rad50_zn_hook PF04423.9 gi|154149899|ref|YP_001403517.1| - 2.6 7.5 9.4 0.91 9.0 0.1 4.3 4 0 0 4 4 4 0 Rad50 zinc hook motif APG6 PF04111.7 gi|154149899|ref|YP_001403517.1| - 5.4 5.9 21.9 3 6.8 5.2 2.2 2 0 0 2 2 2 0 Autophagy protein Apg6 DUF4164 PF13747.1 gi|154149899|ref|YP_001403517.1| - 5.6 7.1 10.9 0.17 12.0 1.2 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF4164) ResIII PF04851.10 gi|154149900|ref|YP_001403518.1| - 8.3e-15 55.0 0.0 1.9e-13 50.6 0.0 2.6 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit Helicase_C PF00271.26 gi|154149900|ref|YP_001403518.1| - 5e-09 35.8 0.1 2.2e-08 33.8 0.0 2.2 2 1 1 3 3 3 1 Helicase conserved C-terminal domain DEAD PF00270.24 gi|154149900|ref|YP_001403518.1| - 6.8e-08 32.1 0.0 9.6e-07 28.4 0.0 2.3 2 0 0 2 2 2 1 DEAD/DEAH box helicase RE_NgoFVII PF09565.5 gi|154149900|ref|YP_001403518.1| - 6e-05 22.1 0.1 0.00011 21.2 0.1 1.5 1 0 0 1 1 1 1 NgoFVII restriction endonuclease Helicase_C_2 PF13307.1 gi|154149900|ref|YP_001403518.1| - 0.00063 19.7 1.4 0.0065 16.4 0.0 3.1 4 0 0 4 4 4 1 Helicase C-terminal domain AAA_19 PF13245.1 gi|154149900|ref|YP_001403518.1| - 0.006 16.3 0.0 0.029 14.1 0.0 2.0 2 0 0 2 2 2 1 Part of AAA domain Flavi_DEAD PF07652.9 gi|154149900|ref|YP_001403518.1| - 0.013 15.2 0.0 0.15 11.8 0.0 2.2 2 0 0 2 2 2 0 Flavivirus DEAD domain DUF2007 PF09413.5 gi|154149900|ref|YP_001403518.1| - 0.029 14.1 0.0 0.064 13.0 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF2007) Zot PF05707.7 gi|154149900|ref|YP_001403518.1| - 0.091 12.2 0.0 1.1 8.7 0.0 2.6 2 1 0 2 2 2 0 Zonular occludens toxin (Zot) Aminotran_5 PF00266.14 gi|154149901|ref|YP_001403519.1| - 1.3e-90 303.8 0.2 1.5e-90 303.6 0.1 1.0 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.12 gi|154149901|ref|YP_001403519.1| - 1.2e-11 44.3 1.6 1.8e-11 43.7 1.1 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.16 gi|154149901|ref|YP_001403519.1| - 3.2e-11 42.9 0.3 4.3e-11 42.5 0.2 1.1 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_1_2 PF00155.16 gi|154149901|ref|YP_001403519.1| - 2.8e-07 29.8 0.1 5.2e-07 28.9 0.0 1.4 2 0 0 2 2 2 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.15 gi|154149901|ref|YP_001403519.1| - 2.6e-05 22.6 0.1 3.6e-05 22.2 0.1 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Pyridoxal_deC PF00282.14 gi|154149901|ref|YP_001403519.1| - 0.036 12.5 0.1 0.053 11.9 0.1 1.3 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase conserved domain DUF1832 PF08870.6 gi|154149902|ref|YP_001403520.1| - 8.2e-32 109.2 0.0 1e-31 108.9 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1832) XRCC4 PF06632.7 gi|154149902|ref|YP_001403520.1| - 0.075 11.8 0.0 0.092 11.5 0.0 1.0 1 0 0 1 1 1 0 DNA double-strand break repair and V(D)J recombination protein XRCC4 AAA_23 PF13476.1 gi|154149903|ref|YP_001403521.1| - 4.9e-19 69.4 36.2 1.7e-13 51.3 23.9 3.4 1 1 1 2 2 2 1 AAA domain AAA_21 PF13304.1 gi|154149903|ref|YP_001403521.1| - 8.8e-08 32.4 6.0 1.4e-06 28.5 0.7 2.4 2 0 0 2 2 2 2 AAA domain SMC_N PF02463.14 gi|154149903|ref|YP_001403521.1| - 2.2e-07 30.3 6.0 0.0058 15.8 0.0 2.8 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain MscS_porin PF12795.2 gi|154149903|ref|YP_001403521.1| - 0.00027 20.3 11.4 0.00027 20.3 7.9 2.3 2 0 0 2 2 2 1 Mechanosensitive ion channel porin domain AAA_29 PF13555.1 gi|154149903|ref|YP_001403521.1| - 0.00041 19.8 0.0 0.00084 18.8 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF948 PF06103.6 gi|154149903|ref|YP_001403521.1| - 0.0064 16.3 6.6 0.18 11.6 1.3 3.5 2 1 1 3 3 3 1 Bacterial protein of unknown function (DUF948) NPV_P10 PF05531.7 gi|154149903|ref|YP_001403521.1| - 0.0068 16.6 7.6 1 9.6 1.9 3.9 2 1 0 2 2 2 1 Nucleopolyhedrovirus P10 protein Zeta_toxin PF06414.7 gi|154149903|ref|YP_001403521.1| - 0.0076 15.3 0.1 0.056 12.5 0.0 2.3 2 0 0 2 2 2 1 Zeta toxin NACHT PF05729.7 gi|154149903|ref|YP_001403521.1| - 0.015 14.9 0.7 0.16 11.6 0.0 2.7 2 0 0 2 2 2 0 NACHT domain FtsK_SpoIIIE PF01580.13 gi|154149903|ref|YP_001403521.1| - 0.02 14.3 0.3 0.081 12.3 0.0 2.0 2 0 0 2 2 2 0 FtsK/SpoIIIE family DUF4140 PF13600.1 gi|154149903|ref|YP_001403521.1| - 0.036 14.5 12.7 1.4 9.4 0.5 3.5 3 0 0 3 3 3 0 N-terminal domain of unknown function (DUF4140) Seryl_tRNA_N PF02403.17 gi|154149903|ref|YP_001403521.1| - 0.06 13.3 22.5 0.028 14.4 2.5 3.8 2 1 1 3 3 3 0 Seryl-tRNA synthetase N-terminal domain CHAD PF05235.9 gi|154149903|ref|YP_001403521.1| - 0.13 11.8 1.7 0.17 11.4 0.6 1.7 2 0 0 2 2 2 0 CHAD domain AAA_22 PF13401.1 gi|154149903|ref|YP_001403521.1| - 0.15 12.1 2.3 2.6 8.2 0.0 3.1 3 1 0 3 3 3 0 AAA domain AAA_16 PF13191.1 gi|154149903|ref|YP_001403521.1| - 0.52 10.2 2.7 1.3 8.9 0.0 2.6 3 1 0 3 3 3 0 AAA ATPase domain Tropomyosin_1 PF12718.2 gi|154149903|ref|YP_001403521.1| - 1.2 8.9 23.1 0.1 12.4 7.7 3.1 2 0 0 2 2 2 0 Tropomyosin like AAA_17 PF13207.1 gi|154149903|ref|YP_001403521.1| - 1.9 9.3 4.9 12 6.7 0.3 3.7 3 0 0 3 3 3 0 AAA domain ABC_tran PF00005.22 gi|154149903|ref|YP_001403521.1| - 2.5 8.3 14.5 0.31 11.3 2.4 3.6 2 2 1 3 3 3 0 ABC transporter Prefoldin PF02996.12 gi|154149903|ref|YP_001403521.1| - 5.8 6.5 23.3 0.21 11.2 0.6 4.4 5 0 0 5 5 5 0 Prefoldin subunit DUF972 PF06156.8 gi|154149903|ref|YP_001403521.1| - 6.4 7.1 16.5 7.6 6.9 1.0 3.7 3 0 0 3 3 3 0 Protein of unknown function (DUF972) V-SNARE PF05008.10 gi|154149903|ref|YP_001403521.1| - 7.8 6.7 21.8 0.24 11.5 3.5 3.6 4 0 0 4 4 3 0 Vesicle transport v-SNARE protein N-terminus PAPS_reduct PF01507.14 gi|154149904|ref|YP_001403522.1| - 1.8e-09 37.6 0.0 6.4e-09 35.8 0.0 2.0 1 1 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family DndB PF14072.1 gi|154149905|ref|YP_001403523.1| - 3.6e-117 391.3 0.1 4e-117 391.2 0.1 1.0 1 0 0 1 1 1 1 DNA-sulfur modification-associated 7TM_transglut PF14402.1 gi|154149906|ref|YP_001403524.1| - 0.11 11.3 0.1 0.12 11.3 0.1 1.1 1 0 0 1 1 1 0 7 transmembrane helices usually fused to an inactive transglutaminase Prenyltrans_2 PF13249.1 gi|154149907|ref|YP_001403525.1| - 2.1e-22 79.6 1.0 1.9e-12 47.5 0.1 4.7 3 2 2 5 5 5 3 Prenyltransferase-like Prenyltrans_1 PF13243.1 gi|154149907|ref|YP_001403525.1| - 5.5e-07 29.5 0.1 0.014 15.4 0.0 3.6 3 1 1 4 4 4 3 Prenyltransferase-like Prenyltrans PF00432.16 gi|154149907|ref|YP_001403525.1| - 0.0037 16.8 6.1 10 5.7 0.0 5.0 5 1 0 5 5 5 3 Prenyltransferase and squalene oxidase repeat PIN PF01850.16 gi|154149909|ref|YP_001403527.1| - 1.9e-07 31.4 0.0 2.1e-07 31.2 0.0 1.0 1 0 0 1 1 1 1 PIN domain NTP_transf_2 PF01909.18 gi|154149910|ref|YP_001403528.1| - 5.8e-10 39.3 0.1 9.2e-10 38.7 0.1 1.3 1 1 0 1 1 1 1 Nucleotidyltransferase domain Kelch_4 PF13418.1 gi|154149910|ref|YP_001403528.1| - 0.026 14.3 0.0 0.042 13.6 0.0 1.3 1 0 0 1 1 1 0 Galactose oxidase, central domain Lipin_N PF04571.9 gi|154149910|ref|YP_001403528.1| - 0.042 13.4 0.1 0.077 12.6 0.0 1.5 2 0 0 2 2 2 0 lipin, N-terminal conserved region DUF294 PF03445.8 gi|154149910|ref|YP_001403528.1| - 0.085 12.4 0.0 0.11 12.1 0.0 1.2 1 0 0 1 1 1 0 Putative nucleotidyltransferase DUF294 HEPN PF05168.9 gi|154149911|ref|YP_001403529.1| - 1.2e-24 86.5 0.1 1.3e-24 86.3 0.1 1.0 1 0 0 1 1 1 1 HEPN domain DUF1469 PF07332.6 gi|154149912|ref|YP_001403530.1| - 0.15 11.8 11.3 1.1 9.0 4.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1469) DUF2919 PF11143.3 gi|154149912|ref|YP_001403530.1| - 0.28 11.0 4.3 0.5 10.1 2.9 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2919) TspO_MBR PF03073.10 gi|154149912|ref|YP_001403530.1| - 0.97 8.9 11.0 0.58 9.6 4.1 2.2 1 1 1 2 2 2 0 TspO/MBR family DUF3989 PF13150.1 gi|154149912|ref|YP_001403530.1| - 1 8.8 6.6 3.5 7.1 0.8 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF3989) YjgP_YjgQ PF03739.9 gi|154149912|ref|YP_001403530.1| - 2.6 6.6 14.7 0.1 11.2 5.6 1.7 2 0 0 2 2 2 0 Predicted permease YjgP/YjgQ family DUF4491 PF14898.1 gi|154149912|ref|YP_001403530.1| - 5.3 7.2 7.1 1.5 9.0 0.5 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF4491) PsbL PF02419.12 gi|154149912|ref|YP_001403530.1| - 6.6 6.2 6.1 3.9 6.9 1.6 2.3 2 0 0 2 2 2 0 PsbL protein DUF350 PF03994.9 gi|154149912|ref|YP_001403530.1| - 7 6.4 13.6 1.3 8.8 0.1 3.2 3 0 0 3 3 3 0 Domain of Unknown Function (DUF350) NfeD PF01957.13 gi|154149912|ref|YP_001403530.1| - 8.6 6.4 11.7 0.59 10.2 2.8 2.0 1 1 1 2 2 2 0 NfeD-like C-terminal, partner-binding DUF1804 PF08822.6 gi|154149913|ref|YP_001403531.1| - 0.013 15.2 1.0 0.02 14.6 0.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1804) NTP_transf_2 PF01909.18 gi|154149914|ref|YP_001403532.1| - 7.5e-12 45.4 0.1 8.5e-12 45.2 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyltransferase domain MdcG PF10620.4 gi|154149914|ref|YP_001403532.1| - 0.0012 18.4 0.0 0.0015 18.0 0.0 1.2 1 1 0 1 1 1 1 Phosphoribosyl-dephospho-CoA transferase MdcG DUF86 PF01934.12 gi|154149915|ref|YP_001403533.1| - 7.6e-24 83.6 0.0 8.6e-24 83.4 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF86 HTH_19 PF12844.2 gi|154149916|ref|YP_001403534.1| - 3.9e-17 62.0 0.3 4.7e-17 61.7 0.2 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.17 gi|154149916|ref|YP_001403534.1| - 1.9e-15 56.4 0.2 2.4e-15 56.1 0.1 1.1 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.1 gi|154149916|ref|YP_001403534.1| - 1.6e-11 44.2 0.0 2e-11 43.8 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.1 gi|154149916|ref|YP_001403534.1| - 6.2e-11 42.3 0.1 7.9e-11 42.0 0.1 1.1 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_37 PF13744.1 gi|154149916|ref|YP_001403534.1| - 9.6e-05 22.1 0.1 0.00012 21.8 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.1 gi|154149916|ref|YP_001403534.1| - 0.00055 19.5 0.5 0.0013 18.3 0.3 1.7 1 1 0 1 1 1 1 Helix-turn-helix domain dUTPase_2 PF08761.6 gi|154149916|ref|YP_001403534.1| - 0.1 12.7 0.0 0.11 12.5 0.0 1.0 1 0 0 1 1 1 0 dUTPase DUF977 PF06163.6 gi|154149916|ref|YP_001403534.1| - 0.26 11.0 1.0 0.35 10.6 0.1 1.6 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF977) DUF86 PF01934.12 gi|154149918|ref|YP_001403536.1| - 4.3e-25 87.6 0.1 5e-25 87.4 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF86 DUF4606 PF15379.1 gi|154149918|ref|YP_001403536.1| - 0.014 15.4 0.1 0.024 14.6 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4606) NTP_transf_2 PF01909.18 gi|154149919|ref|YP_001403537.1| - 1e-14 54.6 0.2 1.2e-14 54.3 0.1 1.1 1 0 0 1 1 1 1 Nucleotidyltransferase domain DNA_pol_B_palm PF14792.1 gi|154149919|ref|YP_001403537.1| - 0.13 12.3 0.0 0.14 12.2 0.0 1.3 1 0 0 1 1 1 0 DNA polymerase beta palm HTH_24 PF13412.1 gi|154149920|ref|YP_001403538.1| - 8.2e-13 47.5 0.0 6.5e-08 31.8 0.0 2.6 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_20 PF12840.2 gi|154149920|ref|YP_001403538.1| - 1.1e-09 37.9 0.0 0.0019 17.9 0.0 2.4 2 0 0 2 2 2 2 Helix-turn-helix domain MarR_2 PF12802.2 gi|154149920|ref|YP_001403538.1| - 5e-06 26.1 0.1 0.0013 18.3 0.0 2.5 2 0 0 2 2 2 1 MarR family MarR PF01047.17 gi|154149920|ref|YP_001403538.1| - 0.00021 20.9 0.0 0.0068 16.0 0.0 2.2 2 0 0 2 2 2 1 MarR family HTH_34 PF13601.1 gi|154149920|ref|YP_001403538.1| - 0.00029 20.8 0.0 0.11 12.4 0.0 2.3 2 0 0 2 2 2 2 Winged helix DNA-binding domain HTH_5 PF01022.15 gi|154149920|ref|YP_001403538.1| - 0.009 15.6 0.0 3.5 7.3 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_AsnC-type PF13404.1 gi|154149920|ref|YP_001403538.1| - 0.035 13.6 0.3 0.2 11.2 0.0 2.3 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain DUF2551 PF10826.3 gi|154149920|ref|YP_001403538.1| - 0.073 12.9 0.0 0.15 12.0 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2551) HTH_Crp_2 PF13545.1 gi|154149920|ref|YP_001403538.1| - 0.091 12.5 0.0 0.18 11.5 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Fe_dep_repress PF01325.14 gi|154149920|ref|YP_001403538.1| - 0.16 11.9 0.0 0.26 11.2 0.0 1.3 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain PPC PF04151.10 gi|154149921|ref|YP_001403539.1| - 3.6e-06 27.8 0.6 6.1e-06 27.1 0.4 1.4 1 0 0 1 1 1 1 Bacterial pre-peptidase C-terminal domain Peptidase_C39_2 PF13529.1 gi|154149922|ref|YP_001403540.1| - 1.1e-15 58.2 4.1 2e-15 57.4 2.8 1.4 1 0 0 1 1 1 1 Peptidase_C39 like family FliP PF00813.15 gi|154149922|ref|YP_001403540.1| - 0.078 12.6 0.0 0.13 11.9 0.0 1.3 1 0 0 1 1 1 0 FliP family PQQ_2 PF13360.1 gi|154149923|ref|YP_001403541.1| - 1.8e-16 60.3 2.7 2.2e-09 37.1 0.1 3.1 1 1 2 3 3 3 3 PQQ-like domain PQQ PF01011.16 gi|154149923|ref|YP_001403541.1| - 4.4e-09 35.4 2.6 0.3 10.6 0.0 5.5 5 1 1 6 6 6 3 PQQ enzyme repeat Arylsulfotrans PF05935.6 gi|154149923|ref|YP_001403541.1| - 1e-07 30.8 0.0 0.0045 15.5 0.0 3.6 1 1 1 4 4 4 2 Arylsulfotransferase (ASST) PQQ_3 PF13570.1 gi|154149923|ref|YP_001403541.1| - 5.6e-07 29.6 12.1 0.0054 16.9 0.0 6.4 6 1 1 7 7 7 2 PQQ-like domain B_lectin PF01453.19 gi|154149923|ref|YP_001403541.1| - 0.00044 20.1 5.9 0.98 9.3 0.3 4.2 2 2 2 4 4 4 2 D-mannose binding lectin VCBS PF13517.1 gi|154149923|ref|YP_001403541.1| - 7.3 7.0 10.3 4.7 7.6 0.1 4.1 3 1 1 4 4 4 0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella PPC PF04151.10 gi|154149923|ref|YP_001403541.1| - 9.3 7.3 9.0 4.5 8.3 0.3 3.2 3 1 0 3 3 3 0 Bacterial pre-peptidase C-terminal domain MerR_1 PF13411.1 gi|154149929|ref|YP_001403547.1| - 0.12 12.1 0.1 0.3 10.8 0.1 1.6 1 0 0 1 1 1 0 MerR HTH family regulatory protein DUF4131 PF13567.1 gi|154149930|ref|YP_001403548.1| - 0.057 12.8 3.7 2.9 7.2 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) PTS_EIIC PF02378.13 gi|154149930|ref|YP_001403548.1| - 0.14 10.9 7.1 0.27 10.0 4.5 1.8 1 1 0 1 1 1 0 Phosphotransferase system, EIIC DUF3382 PF11862.3 gi|154149930|ref|YP_001403548.1| - 1.5 8.7 6.2 0.23 11.3 1.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3382) HxlR PF01638.12 gi|154149931|ref|YP_001403549.1| - 1.4e-33 114.3 0.1 2.4e-33 113.6 0.1 1.3 1 0 0 1 1 1 1 HxlR-like helix-turn-helix PadR PF03551.9 gi|154149931|ref|YP_001403549.1| - 0.012 15.3 0.0 0.029 14.1 0.0 1.5 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family Rrf2 PF02082.15 gi|154149931|ref|YP_001403549.1| - 0.052 13.6 0.0 0.49 10.5 0.0 2.1 2 0 0 2 2 2 0 Transcriptional regulator HTH_12 PF08461.5 gi|154149931|ref|YP_001403549.1| - 0.11 12.2 0.0 0.23 11.2 0.0 1.6 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain Lactamase_B PF00753.22 gi|154149932|ref|YP_001403550.1| - 4.1e-29 101.6 1.1 4.8e-29 101.3 0.8 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|154149932|ref|YP_001403550.1| - 4.3e-05 23.1 0.0 6e-05 22.6 0.0 1.3 1 1 0 1 1 1 1 Beta-lactamase superfamily domain MFS_1 PF07690.11 gi|154149933|ref|YP_001403551.1| - 7.3e-39 133.4 51.5 7.3e-39 133.4 35.7 1.4 2 0 0 2 2 2 1 Major Facilitator Superfamily MFS_2 PF13347.1 gi|154149933|ref|YP_001403551.1| - 0.002 16.5 0.7 0.002 16.5 0.5 4.7 3 1 1 4 4 4 3 MFS/sugar transport protein DUF742 PF05331.6 gi|154149933|ref|YP_001403551.1| - 0.92 9.1 3.2 0.5 9.9 0.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF742) MarR PF01047.17 gi|154149934|ref|YP_001403552.1| - 5.2e-14 51.6 0.0 1.3e-13 50.4 0.0 1.7 2 0 0 2 2 2 1 MarR family MarR_2 PF12802.2 gi|154149934|ref|YP_001403552.1| - 6.1e-11 41.8 0.0 9e-11 41.2 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|154149934|ref|YP_001403552.1| - 2.3e-10 40.6 0.0 3.8e-10 39.9 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_24 PF13412.1 gi|154149934|ref|YP_001403552.1| - 4.7e-08 32.2 0.0 7.8e-08 31.5 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Fe_dep_repress PF01325.14 gi|154149934|ref|YP_001403552.1| - 3.4e-05 23.6 0.0 7.3e-05 22.6 0.0 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain TrmB PF01978.14 gi|154149934|ref|YP_001403552.1| - 3.9e-05 23.2 0.0 6.8e-05 22.4 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.5 gi|154149934|ref|YP_001403552.1| - 0.00014 21.3 0.0 0.00033 20.1 0.0 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_34 PF13601.1 gi|154149934|ref|YP_001403552.1| - 0.00023 21.1 0.2 0.0005 20.0 0.0 1.6 2 0 0 2 2 2 1 Winged helix DNA-binding domain GntR PF00392.16 gi|154149934|ref|YP_001403552.1| - 0.0004 19.7 0.0 0.0009 18.6 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family EAP30 PF04157.11 gi|154149934|ref|YP_001403552.1| - 0.0016 17.6 0.3 0.0073 15.4 0.0 2.2 2 1 0 2 2 2 1 EAP30/Vps36 family HTH_11 PF08279.7 gi|154149934|ref|YP_001403552.1| - 0.0066 16.0 0.0 0.017 14.7 0.0 1.7 1 0 0 1 1 1 1 HTH domain HTH_AsnC-type PF13404.1 gi|154149934|ref|YP_001403552.1| - 0.011 15.2 0.0 0.017 14.6 0.0 1.3 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_10 PF04967.7 gi|154149934|ref|YP_001403552.1| - 0.011 15.3 0.8 0.068 12.7 0.0 2.2 2 0 0 2 2 2 0 HTH DNA binding domain PaaX PF07848.7 gi|154149934|ref|YP_001403552.1| - 0.012 15.6 0.0 0.019 14.9 0.0 1.3 1 0 0 1 1 1 0 PaaX-like protein HTH_20 PF12840.2 gi|154149934|ref|YP_001403552.1| - 0.015 15.0 0.0 0.032 14.0 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Sulfolobus_pRN PF05584.6 gi|154149934|ref|YP_001403552.1| - 0.025 14.5 0.1 0.27 11.2 0.0 2.6 2 1 1 3 3 3 0 Sulfolobus plasmid regulatory protein Rrf2 PF02082.15 gi|154149934|ref|YP_001403552.1| - 0.027 14.5 0.0 0.07 13.2 0.0 1.7 2 0 0 2 2 2 0 Transcriptional regulator STAT_int PF02865.12 gi|154149934|ref|YP_001403552.1| - 0.028 14.3 0.4 2.7 7.9 0.0 2.2 2 0 0 2 2 2 0 STAT protein, protein interaction domain z-alpha PF02295.12 gi|154149934|ref|YP_001403552.1| - 0.032 14.0 0.1 0.33 10.7 0.0 2.2 2 0 0 2 2 2 0 Adenosine deaminase z-alpha domain HTH_Crp_2 PF13545.1 gi|154149934|ref|YP_001403552.1| - 0.058 13.1 0.0 0.12 12.2 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain CHASE3 PF05227.8 gi|154149934|ref|YP_001403552.1| - 0.067 12.8 0.0 0.11 12.1 0.0 1.3 1 0 0 1 1 1 0 CHASE3 domain RPA_C PF08784.6 gi|154149934|ref|YP_001403552.1| - 0.14 12.6 0.0 0.26 11.7 0.0 1.4 1 0 0 1 1 1 0 Replication protein A C terminal Nitroreductase PF00881.19 gi|154149935|ref|YP_001403553.1| - 4.6e-23 81.8 0.0 6e-23 81.4 0.0 1.2 1 0 0 1 1 1 1 Nitroreductase family Fer4 PF00037.22 gi|154149935|ref|YP_001403553.1| - 2.4e-09 36.4 12.3 1.1e-05 24.7 1.6 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|154149935|ref|YP_001403553.1| - 4.1e-08 32.7 12.4 2e-05 24.2 1.7 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|154149935|ref|YP_001403553.1| - 1.2e-07 31.3 6.4 2.3e-07 30.5 4.4 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|154149935|ref|YP_001403553.1| - 1.5e-07 31.6 8.8 2.9e-07 30.7 6.1 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|154149935|ref|YP_001403553.1| - 4.4e-07 30.5 4.3 0.0077 16.9 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_17 PF13534.1 gi|154149935|ref|YP_001403553.1| - 5.8e-06 26.5 3.6 0.057 13.7 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|154149935|ref|YP_001403553.1| - 1.3e-05 25.3 10.2 4.3e-05 23.6 7.1 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|154149935|ref|YP_001403553.1| - 1.4e-05 25.0 9.4 3e-05 23.9 6.5 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|154149935|ref|YP_001403553.1| - 2.2e-05 24.0 12.8 0.012 15.4 2.5 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|154149935|ref|YP_001403553.1| - 6.3e-05 22.7 7.9 0.00011 21.9 5.5 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|154149935|ref|YP_001403553.1| - 0.0031 18.0 7.3 0.027 15.0 1.4 2.4 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|154149935|ref|YP_001403553.1| - 0.0034 17.7 10.6 0.13 12.6 0.4 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|154149935|ref|YP_001403553.1| - 0.004 17.5 15.9 0.21 12.2 2.3 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.2 gi|154149935|ref|YP_001403553.1| - 0.065 13.6 14.1 0.7 10.3 1.9 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.1 gi|154149935|ref|YP_001403553.1| - 0.35 11.2 12.6 0.86 10.0 2.3 2.4 2 0 0 2 2 2 0 4Fe-4S single cluster domain Methyltransf_31 PF13847.1 gi|154149936|ref|YP_001403554.1| - 1.9e-25 89.2 0.0 2.4e-25 88.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|154149936|ref|YP_001403554.1| - 4.8e-17 62.2 0.0 8.7e-17 61.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|154149936|ref|YP_001403554.1| - 6.3e-17 62.1 0.0 1.1e-16 61.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|154149936|ref|YP_001403554.1| - 1.4e-14 54.3 0.0 2.2e-14 53.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|154149936|ref|YP_001403554.1| - 1.5e-13 50.9 0.0 2.6e-13 50.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|154149936|ref|YP_001403554.1| - 1.9e-13 50.4 0.0 3.5e-13 49.5 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|154149936|ref|YP_001403554.1| - 1.2e-12 47.4 0.0 1.7e-12 46.9 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family PCMT PF01135.14 gi|154149936|ref|YP_001403554.1| - 5.1e-11 42.5 0.0 7.6e-11 41.9 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_26 PF13659.1 gi|154149936|ref|YP_001403554.1| - 5.1e-11 42.6 0.0 1.2e-10 41.4 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain GCD14 PF08704.5 gi|154149936|ref|YP_001403554.1| - 1.5e-08 34.4 0.0 2.2e-08 33.9 0.0 1.2 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit MTS PF05175.9 gi|154149936|ref|YP_001403554.1| - 1.8e-06 27.4 0.0 3e-06 26.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain NodS PF05401.6 gi|154149936|ref|YP_001403554.1| - 1.1e-05 24.9 0.0 1.6e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) CMAS PF02353.15 gi|154149936|ref|YP_001403554.1| - 4.3e-05 22.7 0.0 5.7e-05 22.3 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase CheR PF01739.13 gi|154149936|ref|YP_001403554.1| - 0.00031 20.0 0.0 0.014 14.6 0.0 2.3 1 1 1 2 2 2 1 CheR methyltransferase, SAM binding domain Methyltransf_4 PF02390.12 gi|154149936|ref|YP_001403554.1| - 0.00033 19.7 0.0 0.00058 18.9 0.0 1.4 1 0 0 1 1 1 1 Putative methyltransferase PrmA PF06325.8 gi|154149936|ref|YP_001403554.1| - 0.0007 18.8 0.0 0.0011 18.1 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) FtsJ PF01728.14 gi|154149936|ref|YP_001403554.1| - 0.00082 19.4 0.0 0.0015 18.5 0.0 1.7 1 1 0 1 1 1 1 FtsJ-like methyltransferase TehB PF03848.9 gi|154149936|ref|YP_001403554.1| - 0.0015 17.7 0.0 0.0021 17.2 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB RrnaAD PF00398.15 gi|154149936|ref|YP_001403554.1| - 0.0038 16.3 0.0 0.0053 15.8 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_9 PF08003.6 gi|154149936|ref|YP_001403554.1| - 0.0038 15.9 0.0 0.0063 15.2 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) GidB PF02527.10 gi|154149936|ref|YP_001403554.1| - 0.0067 15.5 0.0 0.013 14.6 0.0 1.5 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G MetW PF07021.7 gi|154149936|ref|YP_001403554.1| - 0.0068 15.8 0.0 0.011 15.0 0.0 1.4 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_32 PF13679.1 gi|154149936|ref|YP_001403554.1| - 0.0097 15.5 0.0 0.019 14.6 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_5 PF01795.14 gi|154149936|ref|YP_001403554.1| - 0.17 11.1 0.0 0.25 10.5 0.0 1.2 1 0 0 1 1 1 0 MraW methylase family Fibrillarin PF01269.12 gi|154149936|ref|YP_001403554.1| - 0.17 10.7 0.1 1.2 8.0 0.0 1.9 2 0 0 2 2 2 0 Fibrillarin 7TM_GPCR_Srx PF10328.4 gi|154149937|ref|YP_001403555.1| - 0.015 14.3 0.0 0.019 14.1 0.0 1.0 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srx Acyl_transf_3 PF01757.17 gi|154149939|ref|YP_001403557.1| - 1.3e-28 99.8 46.9 4.3e-28 98.1 32.5 1.7 1 1 0 1 1 1 1 Acyltransferase family MarR PF01047.17 gi|154149941|ref|YP_001403559.1| - 1.6e-13 50.1 0.0 2.7e-13 49.4 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|154149941|ref|YP_001403559.1| - 9.4e-11 41.8 0.0 1.6e-10 41.1 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.2 gi|154149941|ref|YP_001403559.1| - 1.6e-09 37.3 0.0 3.2e-09 36.3 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.1 gi|154149941|ref|YP_001403559.1| - 5.9e-07 28.7 0.0 1.5e-06 27.4 0.0 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_34 PF13601.1 gi|154149941|ref|YP_001403559.1| - 7.1e-06 25.9 0.1 1.9e-05 24.6 0.0 1.7 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_Crp_2 PF13545.1 gi|154149941|ref|YP_001403559.1| - 0.00064 19.4 0.0 0.0011 18.7 0.0 1.3 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain TrmB PF01978.14 gi|154149941|ref|YP_001403559.1| - 0.04 13.6 0.0 0.059 13.0 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_26 PF13443.1 gi|154149941|ref|YP_001403559.1| - 0.066 13.4 0.1 0.22 11.7 0.0 1.9 2 0 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain HxlR PF01638.12 gi|154149941|ref|YP_001403559.1| - 0.078 12.6 0.2 0.24 11.0 0.0 1.8 2 1 0 2 2 2 0 HxlR-like helix-turn-helix HTH_10 PF04967.7 gi|154149941|ref|YP_001403559.1| - 0.14 11.7 0.6 0.39 10.3 0.1 1.9 2 0 0 2 2 2 0 HTH DNA binding domain Plasmid_stabil PF05016.9 gi|154149943|ref|YP_001403561.1| - 0.024 15.0 0.0 0.035 14.4 0.0 1.3 1 0 0 1 1 1 0 Plasmid stabilisation system protein UPF0150 PF03681.10 gi|154149945|ref|YP_001403563.1| - 1.8e-19 69.0 0.1 2.2e-19 68.8 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0150) DUF4381 PF14316.1 gi|154149946|ref|YP_001403564.1| - 0.027 14.5 4.7 0.049 13.7 3.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) PAS_9 PF13426.1 gi|154149947|ref|YP_001403565.1| - 5.5e-28 97.3 0.0 1.7e-10 41.1 0.0 3.5 3 0 0 3 3 3 3 PAS domain PAS_4 PF08448.5 gi|154149947|ref|YP_001403565.1| - 1.3e-21 76.7 0.0 3.6e-07 30.2 0.0 4.6 3 1 0 3 3 3 3 PAS fold Response_reg PF00072.19 gi|154149947|ref|YP_001403565.1| - 1.1e-18 67.2 0.0 2.5e-18 66.1 0.0 1.6 1 0 0 1 1 1 1 Response regulator receiver domain HATPase_c PF02518.21 gi|154149947|ref|YP_001403565.1| - 1.1e-12 47.6 0.0 2.8e-12 46.3 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS PF00989.19 gi|154149947|ref|YP_001403565.1| - 4.4e-12 45.7 0.0 5e-07 29.4 0.0 3.8 3 0 0 3 3 3 2 PAS fold PAS_8 PF13188.1 gi|154149947|ref|YP_001403565.1| - 4e-11 42.3 0.0 6.5e-05 22.6 0.0 3.6 3 0 0 3 3 3 2 PAS domain PAS_7 PF12860.2 gi|154149947|ref|YP_001403565.1| - 2e-06 27.8 0.4 0.021 14.8 0.0 3.9 4 0 0 4 4 4 1 PAS fold PAS_10 PF13596.1 gi|154149947|ref|YP_001403565.1| - 0.0085 16.3 0.0 0.064 13.5 0.0 2.4 2 0 0 2 2 2 1 PAS domain HATPase_c_3 PF13589.1 gi|154149947|ref|YP_001403565.1| - 0.021 14.4 0.0 0.058 13.0 0.0 1.7 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_3 PF08447.6 gi|154149947|ref|YP_001403565.1| - 0.056 13.5 0.0 0.33 11.0 0.0 2.3 2 0 0 2 2 2 0 PAS fold DUF4140 PF13600.1 gi|154149947|ref|YP_001403565.1| - 0.16 12.4 2.0 1.7 9.1 0.1 3.0 3 0 0 3 3 3 0 N-terminal domain of unknown function (DUF4140) HisKA PF00512.20 gi|154149947|ref|YP_001403565.1| - 1.5 8.8 8.5 4.5 7.3 0.0 3.7 4 0 0 4 4 4 0 His Kinase A (phospho-acceptor) domain Plasmid_stabil PF05016.9 gi|154149948|ref|YP_001403566.1| - 1.2e-06 28.7 0.6 1.3e-06 28.6 0.4 1.0 1 0 0 1 1 1 1 Plasmid stabilisation system protein Antitoxin-MazE PF04014.13 gi|154149949|ref|YP_001403567.1| - 2.2e-05 24.0 0.3 3.8e-05 23.2 0.2 1.4 1 0 0 1 1 1 1 Antidote-toxin recognition MazE DUF2375 PF09558.5 gi|154149949|ref|YP_001403567.1| - 0.058 13.2 0.1 0.097 12.5 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2375) adh_short PF00106.20 gi|154149950|ref|YP_001403568.1| - 9.2e-25 87.4 0.0 1.2e-24 87.1 0.0 1.2 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.1 gi|154149950|ref|YP_001403568.1| - 6.9e-21 75.1 0.0 1.1e-20 74.4 0.0 1.3 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 gi|154149950|ref|YP_001403568.1| - 2.5e-06 27.2 0.0 4.2e-06 26.5 0.0 1.3 1 0 0 1 1 1 1 KR domain DUF169 PF02596.10 gi|154149951|ref|YP_001403569.1| - 7.9e-21 74.4 0.0 9.7e-21 74.1 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 DUF169 PF02596.10 gi|154149952|ref|YP_001403570.1| - 1.4e-28 99.7 0.1 2.3e-28 99.0 0.0 1.3 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 FMN_red PF03358.10 gi|154149953|ref|YP_001403571.1| - 2.8e-24 85.3 0.0 3.7e-24 84.9 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|154149953|ref|YP_001403571.1| - 1.2e-13 51.0 0.0 1.5e-13 50.7 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_4 PF12682.2 gi|154149953|ref|YP_001403571.1| - 0.037 13.3 0.0 0.11 11.8 0.0 1.7 1 1 1 2 2 2 0 Flavodoxin MarR PF01047.17 gi|154149954|ref|YP_001403572.1| - 7e-12 44.8 0.0 1.4e-11 43.8 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|154149954|ref|YP_001403572.1| - 5.8e-09 36.1 0.1 1.3e-08 35.0 0.0 1.5 2 0 0 2 2 2 1 Winged helix DNA-binding domain MarR_2 PF12802.2 gi|154149954|ref|YP_001403572.1| - 1.3e-08 34.3 0.0 1.9e-08 33.8 0.0 1.2 1 0 0 1 1 1 1 MarR family TFIIE_alpha PF02002.12 gi|154149954|ref|YP_001403572.1| - 0.0044 16.5 0.1 0.0057 16.1 0.1 1.3 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_24 PF13412.1 gi|154149954|ref|YP_001403572.1| - 0.03 13.7 0.5 0.07 12.5 0.0 1.9 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding HxlR PF01638.12 gi|154149954|ref|YP_001403572.1| - 0.1 12.2 0.0 0.16 11.6 0.0 1.5 1 0 0 1 1 1 0 HxlR-like helix-turn-helix SOXp PF12336.3 gi|154149955|ref|YP_001403573.1| - 0.003 18.1 0.0 0.0057 17.2 0.0 1.5 1 0 0 1 1 1 1 SOX transcription factor DUF4131 PF13567.1 gi|154149958|ref|YP_001403576.1| - 1.8 7.9 8.5 1.9 7.8 0.3 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) Neur_chan_LBD PF02931.18 gi|154149959|ref|YP_001403577.1| - 8.7e-05 21.7 0.0 0.00026 20.2 0.0 1.7 2 0 0 2 2 2 1 Neurotransmitter-gated ion-channel ligand binding domain DUF4118 PF13493.1 gi|154149959|ref|YP_001403577.1| - 0.21 11.7 12.2 1.6 8.9 3.0 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4118) Glyoxalase_3 PF13468.1 gi|154149961|ref|YP_001403579.1| - 2.8e-38 131.5 0.1 3.6e-38 131.2 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_4 PF13669.1 gi|154149961|ref|YP_001403579.1| - 8.3e-05 22.5 0.5 0.021 14.8 0.0 1.8 1 1 1 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_2 PF12681.2 gi|154149961|ref|YP_001403579.1| - 0.012 16.2 0.0 7.9 7.1 0.0 2.6 3 0 0 3 3 3 0 Glyoxalase-like domain NAC PF01849.13 gi|154149961|ref|YP_001403579.1| - 0.058 12.9 0.0 1.3 8.5 0.1 2.3 2 0 0 2 2 2 0 NAC domain Aromatic_hydrox PF11723.3 gi|154149963|ref|YP_001403581.1| - 0.13 11.5 0.0 0.23 10.7 0.0 1.4 1 0 0 1 1 1 0 Homotrimeric ring hydroxylase PALP PF00291.20 gi|154149964|ref|YP_001403582.1| - 9.2e-62 209.0 1.1 1e-61 208.8 0.8 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme ADH_zinc_N PF00107.21 gi|154149964|ref|YP_001403582.1| - 0.00026 20.5 0.2 0.0079 15.7 0.0 2.8 2 1 0 2 2 2 1 Zinc-binding dehydrogenase DFP PF04127.10 gi|154149964|ref|YP_001403582.1| - 0.037 13.6 0.1 0.078 12.5 0.1 1.5 1 0 0 1 1 1 0 DNA / pantothenate metabolism flavoprotein Abhydrolase_3 PF07859.8 gi|154149964|ref|YP_001403582.1| - 0.11 12.1 0.0 0.54 9.7 0.0 1.9 2 0 0 2 2 2 0 alpha/beta hydrolase fold Fer4 PF00037.22 gi|154149965|ref|YP_001403583.1| - 2.7e-12 45.7 22.7 6.7e-07 28.6 0.8 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|154149965|ref|YP_001403583.1| - 5.3e-11 42.7 27.0 3.3e-08 33.7 10.9 2.6 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|154149965|ref|YP_001403583.1| - 1e-09 37.8 14.4 2.4e-07 30.2 0.9 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|154149965|ref|YP_001403583.1| - 1e-09 38.5 13.7 1e-09 38.5 9.5 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|154149965|ref|YP_001403583.1| - 6.8e-09 35.3 13.9 6.8e-09 35.3 9.6 2.5 1 1 2 3 3 3 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|154149965|ref|YP_001403583.1| - 2.7e-07 30.8 23.5 0.00038 20.7 0.5 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|154149965|ref|YP_001403583.1| - 6.1e-07 29.3 27.4 0.00042 20.2 2.2 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|154149965|ref|YP_001403583.1| - 1.8e-06 27.5 13.6 3.7e-05 23.4 1.3 3.6 3 1 0 3 3 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|154149965|ref|YP_001403583.1| - 4.2e-06 27.4 25.3 0.00048 20.8 0.8 2.4 2 1 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|154149965|ref|YP_001403583.1| - 4.2e-05 23.3 12.5 4.2e-05 23.3 8.7 2.9 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|154149965|ref|YP_001403583.1| - 4.3e-05 23.8 23.5 0.00038 20.8 0.5 3.2 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|154149965|ref|YP_001403583.1| - 0.00025 21.1 2.9 0.00025 21.1 2.0 3.6 4 1 0 4 4 2 2 4Fe-4S binding domain Fer4_3 PF12798.2 gi|154149965|ref|YP_001403583.1| - 0.0057 17.1 20.5 0.0097 16.4 3.8 4.0 4 1 0 4 4 2 2 4Fe-4S binding domain LIM PF00412.17 gi|154149965|ref|YP_001403583.1| - 0.14 12.2 5.5 1.7 8.7 0.3 2.5 2 0 0 2 2 2 0 LIM domain Fer4_11 PF13247.1 gi|154149965|ref|YP_001403583.1| - 0.28 11.0 15.0 0.67 9.8 10.4 1.8 1 1 0 1 1 1 0 4Fe-4S dicluster domain CdhD PF03599.11 gi|154149966|ref|YP_001403584.1| - 1.8e-12 46.5 0.0 2.3e-12 46.1 0.0 1.1 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase delta subunit HTH_5 PF01022.15 gi|154149967|ref|YP_001403585.1| - 1.9e-15 56.2 0.0 3.2e-15 55.5 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|154149967|ref|YP_001403585.1| - 1.4e-09 37.5 0.0 2.4e-09 36.8 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.1 gi|154149967|ref|YP_001403585.1| - 0.035 13.4 0.1 0.1 11.9 0.1 1.9 1 1 0 1 1 1 0 Winged helix-turn-helix DNA-binding B-block_TFIIIC PF04182.7 gi|154149967|ref|YP_001403585.1| - 0.14 12.0 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC ABC2_membrane PF01061.19 gi|154149970|ref|YP_001403588.1| - 1.9e-34 118.6 22.1 1.9e-34 118.6 15.4 1.6 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.2 gi|154149970|ref|YP_001403588.1| - 3.4e-15 55.9 31.5 3.4e-15 55.9 21.8 1.4 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.2 gi|154149970|ref|YP_001403588.1| - 2.3e-08 33.2 24.8 5.3e-08 32.0 17.2 1.6 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.2 gi|154149970|ref|YP_001403588.1| - 9.2e-06 24.9 32.0 1.2e-05 24.6 22.2 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein PsbI PF02532.9 gi|154149970|ref|YP_001403588.1| - 0.019 14.5 0.9 0.071 12.7 0.6 2.1 1 0 0 1 1 1 0 Photosystem II reaction centre I protein (PSII 4.8 kDa protein) ABC_tran PF00005.22 gi|154149971|ref|YP_001403589.1| - 4.1e-34 117.8 0.0 2.3e-33 115.4 0.0 1.9 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.1 gi|154149971|ref|YP_001403589.1| - 2e-15 57.5 0.1 1.8e-11 44.5 0.0 2.1 1 1 0 2 2 2 2 AAA domain AAA_15 PF13175.1 gi|154149971|ref|YP_001403589.1| - 2.1e-08 33.6 0.1 1.7e-07 30.6 0.0 1.9 2 0 0 2 2 2 1 AAA ATPase domain DUF4162 PF13732.1 gi|154149971|ref|YP_001403589.1| - 8.3e-05 23.0 0.0 0.00018 21.9 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) SMC_N PF02463.14 gi|154149971|ref|YP_001403589.1| - 0.0013 18.0 0.0 0.098 11.8 0.0 2.2 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 gi|154149971|ref|YP_001403589.1| - 0.0016 17.8 0.3 0.0068 15.9 0.1 1.9 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_22 PF13401.1 gi|154149971|ref|YP_001403589.1| - 0.0018 18.4 0.2 0.018 15.1 0.2 2.3 1 1 0 1 1 1 1 AAA domain AAA_14 PF13173.1 gi|154149971|ref|YP_001403589.1| - 0.0059 16.4 0.0 3.7 7.4 0.0 3.0 3 0 0 3 3 3 1 AAA domain AAA_23 PF13476.1 gi|154149971|ref|YP_001403589.1| - 0.0069 16.7 0.3 0.017 15.4 0.1 1.6 1 1 0 2 2 2 1 AAA domain AAA PF00004.24 gi|154149971|ref|YP_001403589.1| - 0.0097 16.1 0.4 0.3 11.2 0.3 2.8 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.1 gi|154149971|ref|YP_001403589.1| - 0.015 14.7 0.5 0.81 9.0 0.4 2.6 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.12 gi|154149971|ref|YP_001403589.1| - 0.042 13.2 0.0 2.3 7.6 0.0 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein Mg_chelatase PF01078.16 gi|154149971|ref|YP_001403589.1| - 0.044 12.9 0.0 0.48 9.5 0.0 2.5 3 0 0 3 3 3 0 Magnesium chelatase, subunit ChlI AAA_16 PF13191.1 gi|154149971|ref|YP_001403589.1| - 0.065 13.2 0.0 0.26 11.2 0.0 2.0 1 1 0 1 1 1 0 AAA ATPase domain UPF0079 PF02367.12 gi|154149971|ref|YP_001403589.1| - 0.095 12.3 0.1 0.41 10.2 0.0 2.0 2 0 0 2 2 2 0 Uncharacterised P-loop hydrolase UPF0079 AAA_19 PF13245.1 gi|154149971|ref|YP_001403589.1| - 0.11 12.2 0.2 0.92 9.3 0.0 2.4 2 1 0 2 2 2 0 Part of AAA domain Oxidored_molyb PF00174.14 gi|154149972|ref|YP_001403590.1| - 5.1e-41 139.9 0.0 6.3e-41 139.5 0.0 1.1 1 0 0 1 1 1 1 Oxidoreductase molybdopterin binding domain DUF362 PF04015.7 gi|154149973|ref|YP_001403591.1| - 8.4e-27 93.9 0.0 1.2e-26 93.4 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF362) Fer4_16 PF13484.1 gi|154149974|ref|YP_001403592.1| - 7.3e-06 26.6 4.4 1.7e-05 25.4 3.1 1.6 1 0 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_7 PF12838.2 gi|154149974|ref|YP_001403592.1| - 0.045 14.1 5.3 0.092 13.1 3.7 1.6 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4 PF00037.22 gi|154149974|ref|YP_001403592.1| - 0.22 11.1 7.3 0.096 12.3 0.8 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_10 PF13237.1 gi|154149974|ref|YP_001403592.1| - 0.35 10.6 5.7 1 9.2 3.9 1.8 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|154149974|ref|YP_001403592.1| - 3.6 8.3 8.6 2.5 8.8 2.3 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain DUF2284 PF10050.4 gi|154149975|ref|YP_001403593.1| - 3.6e-53 179.5 0.0 4.4e-53 179.2 0.0 1.1 1 0 0 1 1 1 1 Predicted metal-binding protein (DUF2284) HIT PF01230.18 gi|154149976|ref|YP_001403594.1| - 1.6e-18 67.0 0.0 2.3e-18 66.5 0.0 1.2 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.3 gi|154149976|ref|YP_001403594.1| - 4.1e-07 30.2 0.0 5.3e-07 29.8 0.0 1.1 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding CwfJ_C_1 PF04677.10 gi|154149976|ref|YP_001403594.1| - 0.00012 21.6 0.2 0.00026 20.6 0.2 1.5 1 1 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 Inhibitor_G39P PF11417.3 gi|154149977|ref|YP_001403595.1| - 0.075 13.0 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 Loader and inhibitor of phage G40P Pkinase PF00069.20 gi|154149978|ref|YP_001403596.1| - 5.5e-53 179.7 0.0 6.6e-53 179.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.12 gi|154149978|ref|YP_001403596.1| - 2.1e-34 118.7 0.0 2.6e-34 118.4 0.0 1.0 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.18 gi|154149978|ref|YP_001403596.1| - 7.9e-11 42.1 0.1 5.1e-05 23.1 0.1 2.3 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kinase-like PF14531.1 gi|154149978|ref|YP_001403596.1| - 1.1e-07 31.0 0.0 1.5e-07 30.6 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.9 gi|154149978|ref|YP_001403596.1| - 0.0011 18.0 0.0 0.0016 17.5 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.17 gi|154149978|ref|YP_001403596.1| - 0.01 15.2 0.0 0.023 14.0 0.0 1.5 1 1 1 2 2 2 0 RIO1 family Choline_kinase PF01633.15 gi|154149978|ref|YP_001403596.1| - 0.076 12.5 0.0 0.11 12.0 0.0 1.2 1 0 0 1 1 1 0 Choline/ethanolamine kinase P-II PF00543.17 gi|154149979|ref|YP_001403597.1| - 2.7e-32 111.2 0.7 3e-32 111.1 0.5 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II DUF970 PF06153.6 gi|154149979|ref|YP_001403597.1| - 0.0021 17.9 0.4 0.056 13.4 0.2 2.2 1 1 0 1 1 1 1 Protein of unknown function (DUF970) Nit_Regul_Hom PF10126.4 gi|154149979|ref|YP_001403597.1| - 0.11 12.2 0.1 7 6.4 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized protein, homolog of nitrogen regulatory protein PII P-II PF00543.17 gi|154149980|ref|YP_001403598.1| - 1.8e-23 82.9 0.0 6.5e-23 81.1 0.0 1.7 1 1 0 1 1 1 1 Nitrogen regulatory protein P-II P-II PF00543.17 gi|154149981|ref|YP_001403599.1| - 3.7e-23 81.9 0.2 5.5e-23 81.3 0.1 1.2 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II DUF970 PF06153.6 gi|154149981|ref|YP_001403599.1| - 0.00062 19.7 0.1 0.0014 18.5 0.0 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF970) DUF2179 PF10035.4 gi|154149981|ref|YP_001403599.1| - 0.12 11.9 0.3 0.27 10.8 0.1 1.9 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2179) PP2C_2 PF13672.1 gi|154149982|ref|YP_001403600.1| - 6.4e-20 71.4 0.1 9.4e-20 70.9 0.1 1.2 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C PF00481.16 gi|154149982|ref|YP_001403600.1| - 3.1e-13 49.7 0.1 7.6e-13 48.4 0.1 1.6 1 1 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.7 gi|154149982|ref|YP_001403600.1| - 1.5e-06 28.0 0.0 3.8e-06 26.7 0.0 1.6 1 1 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) AA_permease_2 PF13520.1 gi|154149983|ref|YP_001403601.1| - 4.2e-20 71.7 50.1 6.4e-20 71.0 34.8 1.3 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.16 gi|154149983|ref|YP_001403601.1| - 6.8e-17 60.9 46.2 1.8e-16 59.5 32.0 1.7 1 1 0 1 1 1 1 Amino acid permease Consortin_C PF15281.1 gi|154149983|ref|YP_001403601.1| - 0.97 8.9 2.7 0.92 9.0 0.7 1.8 2 0 0 2 2 2 0 Consortin C-terminus SBF PF01758.11 gi|154149984|ref|YP_001403602.1| - 3.6e-16 59.1 15.3 8.3e-16 57.9 10.6 1.6 1 0 0 1 1 1 1 Sodium Bile acid symporter family KdpA PF03814.10 gi|154149986|ref|YP_001403604.1| - 1.8e-205 683.1 32.6 2.1e-205 682.9 22.6 1.0 1 0 0 1 1 1 1 Potassium-transporting ATPase A subunit DUF1517 PF07466.6 gi|154149986|ref|YP_001403604.1| - 0.0094 14.9 0.8 0.024 13.6 0.6 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF1517) DUF2754 PF10953.3 gi|154149986|ref|YP_001403604.1| - 0.67 10.0 6.3 8.3 6.5 0.5 3.8 3 0 0 3 3 3 0 Protein of unknown function (DUF2754) Hydrolase PF00702.21 gi|154149987|ref|YP_001403605.1| - 5.6e-38 131.5 2.8 2.6e-37 129.3 1.5 2.0 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase E1-E2_ATPase PF00122.15 gi|154149987|ref|YP_001403605.1| - 1.6e-32 112.4 0.4 1.6e-32 112.4 0.2 2.2 2 0 0 2 2 2 1 E1-E2 ATPase HAD PF12710.2 gi|154149987|ref|YP_001403605.1| - 2.7e-12 47.2 0.0 6.3e-12 46.0 0.0 1.7 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|154149987|ref|YP_001403605.1| - 8.4e-06 25.5 0.6 7.8e-05 22.3 0.1 2.2 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Response_reg PF00072.19 gi|154149987|ref|YP_001403605.1| - 0.046 13.7 0.1 0.14 12.1 0.0 1.8 2 0 0 2 2 2 0 Response regulator receiver domain PAS_4 PF08448.5 gi|154149988|ref|YP_001403606.1| - 0.002 18.1 0.0 0.003 17.5 0.0 1.2 1 0 0 1 1 1 1 PAS fold PAS_8 PF13188.1 gi|154149988|ref|YP_001403606.1| - 0.012 15.5 0.0 0.024 14.4 0.0 1.5 1 0 0 1 1 1 0 PAS domain PAS_9 PF13426.1 gi|154149988|ref|YP_001403606.1| - 0.029 14.7 0.0 0.043 14.1 0.0 1.3 1 0 0 1 1 1 0 PAS domain PAS PF00989.19 gi|154149988|ref|YP_001403606.1| - 0.054 13.2 0.0 0.13 12.0 0.0 1.7 2 1 0 2 2 2 0 PAS fold zf-piccolo PF05715.8 gi|154149988|ref|YP_001403606.1| - 0.25 11.4 3.3 0.17 11.8 0.3 2.0 2 0 0 2 2 2 0 Piccolo Zn-finger zf-C3HC4 PF00097.20 gi|154149988|ref|YP_001403606.1| - 2.2 8.0 8.6 0.13 11.9 0.6 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Cation_efflux PF01545.16 gi|154149989|ref|YP_001403607.1| - 9.2e-56 189.0 4.1 1e-55 188.8 2.8 1.0 1 0 0 1 1 1 1 Cation efflux family PMT_2 PF13231.1 gi|154149992|ref|YP_001403610.1| - 3.3e-09 36.8 15.0 3.3e-09 36.8 10.4 3.7 2 1 1 3 3 3 1 Dolichyl-phosphate-mannose-protein mannosyltransferase DUF2165 PF09933.4 gi|154149992|ref|YP_001403610.1| - 0.051 13.3 0.4 0.051 13.3 0.3 3.0 4 0 0 4 4 4 0 Predicted small integral membrane protein (DUF2165) ATP-grasp_2 PF08442.5 gi|154149993|ref|YP_001403611.1| - 0.081 12.2 0.0 0.092 12.1 0.0 1.1 1 0 0 1 1 1 0 ATP-grasp domain DUF4349 PF14257.1 gi|154149994|ref|YP_001403612.1| - 5.3e-71 238.9 0.4 7.2e-71 238.4 0.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4349) DivIC PF04977.10 gi|154149994|ref|YP_001403612.1| - 0.55 9.7 4.3 10 5.6 0.3 2.5 1 1 1 2 2 2 0 Septum formation initiator NPV_P10 PF05531.7 gi|154149994|ref|YP_001403612.1| - 0.66 10.2 7.0 0.76 10.0 0.9 2.6 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein TrbC PF04956.8 gi|154149994|ref|YP_001403612.1| - 0.66 10.0 10.4 0.41 10.6 0.2 3.3 3 0 0 3 3 3 0 TrbC/VIRB2 family PrgI PF12666.2 gi|154149994|ref|YP_001403612.1| - 1 9.5 4.4 0.6 10.2 0.4 2.3 2 0 0 2 2 2 0 PrgI family protein Fer4_9 PF13187.1 gi|154149995|ref|YP_001403613.1| - 0.0008 19.6 10.7 0.0016 18.6 7.4 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|154149995|ref|YP_001403613.1| - 0.0015 18.3 12.2 0.0022 17.8 8.4 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|154149995|ref|YP_001403613.1| - 0.033 14.2 11.6 0.091 12.7 1.6 2.2 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4 PF00037.22 gi|154149995|ref|YP_001403613.1| - 0.077 12.6 2.8 0.077 12.6 2.0 2.6 3 1 0 3 3 3 0 4Fe-4S binding domain Fer4_16 PF13484.1 gi|154149995|ref|YP_001403613.1| - 0.33 11.7 9.3 0.2 12.4 1.5 2.2 2 0 0 2 2 2 0 4Fe-4S double cluster binding domain Fer4_18 PF13746.1 gi|154149995|ref|YP_001403613.1| - 7.5 7.0 14.2 1.2 9.6 2.2 2.5 2 1 0 2 2 2 0 4Fe-4S dicluster domain Hemerythrin PF01814.18 gi|154149997|ref|YP_001403615.1| - 3.1e-17 62.9 1.9 3.6e-17 62.7 1.3 1.0 1 0 0 1 1 1 1 Hemerythrin HHE cation binding domain DUF4455 PF14643.1 gi|154149997|ref|YP_001403615.1| - 0.00092 17.9 3.3 0.001 17.8 2.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4455) M PF02370.11 gi|154149997|ref|YP_001403615.1| - 1.1 9.8 3.8 0.54 10.7 0.7 2.1 2 0 0 2 2 2 0 M protein repeat Pirin PF02678.11 gi|154149998|ref|YP_001403616.1| - 7.6e-37 125.4 0.2 1.2e-36 124.8 0.1 1.3 1 0 0 1 1 1 1 Pirin Pirin_C PF05726.8 gi|154149998|ref|YP_001403616.1| - 1.6e-30 105.2 0.0 5.7e-29 100.2 0.0 2.1 2 0 0 2 2 2 1 Pirin C-terminal cupin domain zinc_ribbon_2 PF13240.1 gi|154149999|ref|YP_001403617.1| - 6.9e-05 22.2 1.3 0.00012 21.4 0.9 1.4 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.2 gi|154149999|ref|YP_001403617.1| - 0.00012 21.7 0.8 0.0002 21.1 0.6 1.2 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|154149999|ref|YP_001403617.1| - 0.00019 20.5 3.1 0.00036 19.6 2.1 1.5 1 0 0 1 1 1 1 zinc-ribbon domain TM2 PF05154.11 gi|154149999|ref|YP_001403617.1| - 0.00069 19.7 4.3 0.00069 19.7 3.0 2.8 3 0 0 3 3 3 1 TM2 domain DUF1628 PF07790.6 gi|154149999|ref|YP_001403617.1| - 0.018 15.8 2.1 0.018 15.8 1.5 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1628) Nudix_N_2 PF14803.1 gi|154149999|ref|YP_001403617.1| - 0.066 12.9 1.5 1.1 8.9 0.1 2.3 2 0 0 2 2 2 0 Nudix N-terminal Prok-RING_1 PF14446.1 gi|154149999|ref|YP_001403617.1| - 0.12 12.1 0.9 0.18 11.5 0.6 1.2 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 PRA1 PF03208.14 gi|154149999|ref|YP_001403617.1| - 0.17 11.2 8.0 0.29 10.4 5.5 1.3 1 0 0 1 1 1 0 PRA1 family protein Zn_ribbon_2 PF12674.2 gi|154149999|ref|YP_001403617.1| - 0.28 11.5 2.0 0.48 10.7 1.4 1.4 1 0 0 1 1 1 0 Putative zinc ribbon domain Fig1 PF12351.3 gi|154149999|ref|YP_001403617.1| - 0.88 9.4 6.4 1.6 8.5 4.4 1.4 1 0 0 1 1 1 0 Ca2+ regulator and membrane fusion protein Fig1 GTP_EFTU PF00009.22 gi|154150000|ref|YP_001403618.1| - 1.4e-13 50.7 0.0 2.1e-12 46.8 0.0 2.0 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Miro PF08477.8 gi|154150000|ref|YP_001403618.1| - 4.2e-10 40.1 0.0 5.5e-10 39.7 0.0 1.1 1 0 0 1 1 1 1 Miro-like protein MMR_HSR1 PF01926.18 gi|154150000|ref|YP_001403618.1| - 4.6e-10 39.4 0.0 6e-10 39.0 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase ATP_bind_1 PF03029.12 gi|154150000|ref|YP_001403618.1| - 1.4e-09 37.8 0.0 3.6e-06 26.7 0.0 2.1 1 1 1 2 2 2 2 Conserved hypothetical ATP binding protein Ras PF00071.17 gi|154150000|ref|YP_001403618.1| - 4.5e-05 22.8 0.0 7.4e-05 22.1 0.0 1.4 1 1 0 1 1 1 1 Ras family Arf PF00025.16 gi|154150000|ref|YP_001403618.1| - 5.5e-05 22.4 0.0 7.2e-05 22.0 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family DUF258 PF03193.11 gi|154150000|ref|YP_001403618.1| - 0.00062 18.9 0.0 0.00081 18.6 0.0 1.5 1 1 0 1 1 1 1 Protein of unknown function, DUF258 Dynamin_N PF00350.18 gi|154150000|ref|YP_001403618.1| - 0.0019 18.0 0.0 0.0065 16.3 0.0 1.7 1 1 1 2 2 2 1 Dynamin family AAA_24 PF13479.1 gi|154150000|ref|YP_001403618.1| - 0.0032 17.0 0.1 0.0055 16.3 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_28 PF13521.1 gi|154150000|ref|YP_001403618.1| - 0.0041 17.1 0.2 0.0076 16.2 0.1 1.6 1 1 0 1 1 1 1 AAA domain ABC_tran PF00005.22 gi|154150000|ref|YP_001403618.1| - 0.0042 17.4 0.0 0.019 15.2 0.0 2.0 1 1 0 1 1 1 1 ABC transporter PduV-EutP PF10662.4 gi|154150000|ref|YP_001403618.1| - 0.0049 16.3 0.0 0.015 14.8 0.0 1.7 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation FeoB_N PF02421.13 gi|154150000|ref|YP_001403618.1| - 0.0082 15.4 0.0 0.03 13.5 0.0 1.8 1 1 0 1 1 1 1 Ferrous iron transport protein B AAA_22 PF13401.1 gi|154150000|ref|YP_001403618.1| - 0.014 15.5 0.0 0.021 14.9 0.0 1.4 1 1 0 1 1 1 0 AAA domain AAA_17 PF13207.1 gi|154150000|ref|YP_001403618.1| - 0.022 15.5 0.0 0.026 15.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain cobW PF02492.14 gi|154150000|ref|YP_001403618.1| - 0.044 13.2 0.1 0.34 10.3 0.0 2.0 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_29 PF13555.1 gi|154150000|ref|YP_001403618.1| - 0.049 13.1 0.0 0.1 12.1 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain Viral_helicase1 PF01443.13 gi|154150000|ref|YP_001403618.1| - 0.12 11.9 0.0 0.16 11.4 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase HD PF01966.17 gi|154150001|ref|YP_001403619.1| - 1.5e-06 28.2 0.1 2.5e-06 27.5 0.1 1.5 1 0 0 1 1 1 1 HD domain PAS_9 PF13426.1 gi|154150002|ref|YP_001403620.1| - 8.5e-89 292.7 0.1 2e-14 53.8 0.0 8.8 8 1 0 8 8 8 8 PAS domain PAS PF00989.19 gi|154150002|ref|YP_001403620.1| - 1.9e-61 204.8 0.3 8.2e-11 41.6 0.0 8.6 8 1 0 8 8 8 6 PAS fold PAS_4 PF08448.5 gi|154150002|ref|YP_001403620.1| - 2.4e-55 185.2 2.1 8e-10 38.7 0.0 7.9 7 1 0 7 7 7 7 PAS fold PAS_8 PF13188.1 gi|154150002|ref|YP_001403620.1| - 1.3e-39 132.7 0.5 1.1e-06 28.2 0.0 7.3 8 0 0 8 8 8 6 PAS domain PAS_3 PF08447.6 gi|154150002|ref|YP_001403620.1| - 4.8e-27 93.9 0.0 0.0001 22.3 0.0 8.3 8 0 0 8 8 8 5 PAS fold Response_reg PF00072.19 gi|154150002|ref|YP_001403620.1| - 1e-18 67.3 0.0 5.3e-18 65.0 0.0 2.4 1 0 0 1 1 1 1 Response regulator receiver domain HATPase_c PF02518.21 gi|154150002|ref|YP_001403620.1| - 6.6e-14 51.5 0.0 1.9e-13 50.1 0.0 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_7 PF12860.2 gi|154150002|ref|YP_001403620.1| - 5.8e-06 26.2 9.5 0.23 11.4 0.0 7.6 8 3 0 8 8 7 2 PAS fold RasGAP PF00616.14 gi|154150002|ref|YP_001403620.1| - 0.00085 19.0 0.1 0.0086 15.7 0.0 2.5 2 1 0 2 2 2 1 GTPase-activator protein for Ras-like GTPase DUF3892 PF13031.1 gi|154150002|ref|YP_001403620.1| - 0.0017 18.6 0.3 0.012 15.9 0.1 2.5 2 0 0 2 2 2 1 Protein of unknown function (DUF3892) Cas_Csn2 PF09711.5 gi|154150002|ref|YP_001403620.1| - 0.036 13.7 0.0 0.073 12.7 0.0 1.4 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csn2) PAS_10 PF13596.1 gi|154150002|ref|YP_001403620.1| - 0.087 13.0 3.2 29 4.9 0.0 4.8 7 0 0 7 7 6 0 PAS domain SPOB_a PF14689.1 gi|154150002|ref|YP_001403620.1| - 0.14 11.6 0.8 0.43 10.1 0.2 2.1 2 0 0 2 2 1 0 Sensor_kinase_SpoOB-type, alpha-helical domain EMP24_GP25L PF01105.19 gi|154150002|ref|YP_001403620.1| - 0.4 10.3 3.7 8.4 6.0 0.5 3.0 2 0 0 2 2 2 0 emp24/gp25L/p24 family/GOLD Pro_isomerase PF00160.16 gi|154150003|ref|YP_001403621.1| - 5.6e-50 169.5 0.1 6.3e-50 169.3 0.1 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Pro_isomerase PF00160.16 gi|154150004|ref|YP_001403622.1| - 1.5e-49 168.1 0.0 1.8e-49 167.9 0.0 1.1 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DUF4179 PF13786.1 gi|154150005|ref|YP_001403623.1| - 0.059 13.6 0.7 0.059 13.6 0.5 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4179) Peptidase_M73 PF12389.3 gi|154150005|ref|YP_001403623.1| - 0.09 12.2 0.3 0.16 11.4 0.0 1.6 2 0 0 2 2 2 0 Camelysin metallo-endopeptidase Phage_cap_E PF03864.10 gi|154150005|ref|YP_001403623.1| - 0.1 11.4 0.4 3.4 6.5 0.1 2.1 2 0 0 2 2 2 0 Phage major capsid protein E PDGLE PF13190.1 gi|154150005|ref|YP_001403623.1| - 1.4 8.6 4.6 33 4.2 3.2 2.3 1 1 0 1 1 1 0 PDGLE domain PEGA PF08308.6 gi|154150006|ref|YP_001403624.1| - 2.7e-63 209.6 28.9 5e-19 67.8 0.3 5.9 6 1 0 6 6 6 4 PEGA domain CarboxypepD_reg PF13620.1 gi|154150006|ref|YP_001403624.1| - 4.6e-10 39.4 23.9 0.0069 16.4 0.1 5.5 5 0 0 5 5 5 4 Carboxypeptidase regulatory-like domain DUF4480 PF13715.1 gi|154150006|ref|YP_001403624.1| - 1.4e-06 28.2 4.9 0.0093 15.9 0.3 4.8 4 1 1 5 5 5 2 Domain of unknown function (DUF4480) DUF4399 PF14347.1 gi|154150006|ref|YP_001403624.1| - 0.0022 17.9 0.5 0.64 10.0 0.0 3.6 3 0 0 3 3 3 1 Domain of unknown function (DUF4399) CBM_6 PF03422.10 gi|154150006|ref|YP_001403624.1| - 0.38 10.9 13.7 4.2 7.5 1.0 4.1 3 2 0 3 3 3 0 Carbohydrate binding module (family 6) Autotrns_rpt PF12951.2 gi|154150006|ref|YP_001403624.1| - 9.5 6.0 12.8 11 5.7 1.0 4.8 3 0 0 3 3 3 0 Autotransporter-associated beta strand repeat VPEP PF07589.6 gi|154150006|ref|YP_001403624.1| - 10 6.2 7.1 0.42 10.5 0.1 2.4 2 0 0 2 2 2 0 PEP-CTERM motif Aminotran_1_2 PF00155.16 gi|154150007|ref|YP_001403625.1| - 1.5e-27 96.5 0.0 1.9e-27 96.1 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_MocR PF12897.2 gi|154150007|ref|YP_001403625.1| - 2.4e-06 26.3 0.0 3.3e-06 25.9 0.0 1.1 1 0 0 1 1 1 1 Alanine-glyoxylate amino-transferase C_GCAxxG_C_C PF09719.5 gi|154150008|ref|YP_001403626.1| - 3.4e-31 107.5 0.2 4e-31 107.3 0.1 1.1 1 0 0 1 1 1 1 Putative redox-active protein (C_GCAxxG_C_C) DUF2317 PF10079.4 gi|154150009|ref|YP_001403627.1| - 0.27 9.8 6.6 0.37 9.3 1.0 2.0 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2317) PAS_9 PF13426.1 gi|154150010|ref|YP_001403628.1| - 7.9e-14 51.8 0.0 1.7e-13 50.8 0.0 1.6 1 0 0 1 1 1 1 PAS domain HATPase_c PF02518.21 gi|154150010|ref|YP_001403628.1| - 1.1e-12 47.6 0.1 2.2e-12 46.6 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_4 PF08448.5 gi|154150010|ref|YP_001403628.1| - 9.4e-11 41.7 0.0 1.7e-10 40.8 0.0 1.5 1 0 0 1 1 1 1 PAS fold PAS_8 PF13188.1 gi|154150010|ref|YP_001403628.1| - 9.5e-07 28.4 0.0 2.4e-06 27.1 0.0 1.7 1 0 0 1 1 1 1 PAS domain PAS PF00989.19 gi|154150010|ref|YP_001403628.1| - 4.4e-06 26.4 0.0 8.5e-06 25.5 0.0 1.5 1 0 0 1 1 1 1 PAS fold PAS_3 PF08447.6 gi|154150010|ref|YP_001403628.1| - 0.00016 21.7 0.0 0.00081 19.4 0.0 2.1 1 1 0 1 1 1 1 PAS fold HATPase_c_2 PF13581.1 gi|154150010|ref|YP_001403628.1| - 0.0039 16.9 0.0 0.0076 16.0 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain N6_N4_Mtase PF01555.13 gi|154150012|ref|YP_001403630.1| - 3.1e-41 141.3 0.0 4.1e-41 140.9 0.0 1.1 1 0 0 1 1 1 1 DNA methylase Methyltransf_26 PF13659.1 gi|154150012|ref|YP_001403630.1| - 8e-16 58.1 0.0 1.6e-07 31.3 0.0 2.2 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_18 PF12847.2 gi|154150012|ref|YP_001403630.1| - 1.5e-07 32.0 0.0 0.015 15.8 0.0 2.2 2 0 0 2 2 2 2 Methyltransferase domain UPF0020 PF01170.13 gi|154150012|ref|YP_001403630.1| - 0.00013 21.5 0.0 0.025 14.1 0.0 2.1 2 0 0 2 2 2 2 Putative RNA methylase family UPF0020 N6_Mtase PF02384.11 gi|154150012|ref|YP_001403630.1| - 0.0049 15.9 0.0 1.6 7.7 0.0 2.1 2 0 0 2 2 2 2 N-6 DNA Methylase Cons_hypoth95 PF03602.10 gi|154150012|ref|YP_001403630.1| - 0.0091 15.3 0.2 0.24 10.7 0.0 2.1 2 0 0 2 2 2 1 Conserved hypothetical protein 95 Methyltransf_15 PF09445.5 gi|154150012|ref|YP_001403630.1| - 0.033 13.7 0.0 2.6 7.5 0.0 2.1 2 0 0 2 2 2 0 RNA cap guanine-N2 methyltransferase UPF0066 PF01980.11 gi|154150013|ref|YP_001403631.1| - 7.1e-36 122.7 0.0 8.8e-36 122.4 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0066 DUF2124 PF09897.4 gi|154150014|ref|YP_001403632.1| - 1.9e-53 180.1 0.0 2.1e-53 179.9 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2124) AIRS_C PF02769.17 gi|154150015|ref|YP_001403633.1| - 1.9e-38 131.8 0.3 2e-24 86.3 0.0 2.3 2 0 0 2 2 2 2 AIR synthase related protein, C-terminal domain AIRS PF00586.19 gi|154150015|ref|YP_001403633.1| - 1e-24 86.5 0.1 1.3e-13 50.9 0.0 2.9 2 0 0 2 2 2 2 AIR synthase related protein, N-terminal domain GATase_5 PF13507.1 gi|154150016|ref|YP_001403634.1| - 4.6e-76 255.1 0.0 5.8e-76 254.8 0.0 1.0 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase_3 PF07685.9 gi|154150016|ref|YP_001403634.1| - 0.0024 17.4 0.0 0.0048 16.4 0.0 1.5 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase PF00117.23 gi|154150016|ref|YP_001403634.1| - 0.035 13.5 0.0 0.094 12.1 0.0 1.6 1 1 0 1 1 1 0 Glutamine amidotransferase class-I DJ-1_PfpI PF01965.19 gi|154150016|ref|YP_001403634.1| - 0.17 11.3 0.0 0.36 10.2 0.0 1.6 1 1 0 1 1 1 0 DJ-1/PfpI family DZR PF12773.2 gi|154150017|ref|YP_001403635.1| - 9.7e-18 63.7 27.1 1.6e-10 40.6 4.7 2.4 1 1 1 2 2 2 2 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|154150017|ref|YP_001403635.1| - 6.6e-16 56.9 23.7 2.6e-05 23.2 2.9 3.3 3 0 0 3 3 3 3 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|154150017|ref|YP_001403635.1| - 4.1e-14 51.5 20.6 9.3e-05 21.7 0.5 3.4 3 0 0 3 3 3 3 zinc-ribbon domain NOB1_Zn_bind PF08772.6 gi|154150017|ref|YP_001403635.1| - 9.3e-06 25.3 18.9 0.05 13.4 0.6 3.3 2 1 1 3 3 3 3 Nin one binding (NOB1) Zn-ribbon like UPF0547 PF10571.4 gi|154150017|ref|YP_001403635.1| - 0.00039 20.0 27.2 0.016 14.9 1.9 4.6 3 2 1 4 4 4 3 Uncharacterised protein family UPF0547 Nudix_N_2 PF14803.1 gi|154150017|ref|YP_001403635.1| - 0.00077 19.1 24.9 0.32 10.6 1.8 6.0 4 2 1 5 5 5 1 Nudix N-terminal zf-HIT PF04438.11 gi|154150017|ref|YP_001403635.1| - 0.019 14.6 3.7 0.019 14.6 2.6 4.7 3 2 2 5 5 5 0 HIT zinc finger zf-FPG_IleRS PF06827.9 gi|154150017|ref|YP_001403635.1| - 0.038 13.6 17.6 0.52 10.0 2.4 3.7 2 1 0 3 3 3 0 Zinc finger found in FPG and IleRS zf-C2HC5 PF06221.8 gi|154150017|ref|YP_001403635.1| - 0.039 13.7 1.0 0.039 13.7 0.7 3.7 1 1 2 3 3 3 0 Putative zinc finger motif, C2HC5-type Auto_anti-p27 PF06677.7 gi|154150017|ref|YP_001403635.1| - 0.042 13.6 1.7 0.042 13.6 1.2 4.6 3 1 1 4 4 4 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Unstab_antitox PF09720.5 gi|154150017|ref|YP_001403635.1| - 0.048 13.3 0.1 0.11 12.2 0.1 1.5 1 0 0 1 1 1 0 Putative addiction module component NMD3 PF04981.8 gi|154150017|ref|YP_001403635.1| - 0.063 12.3 9.7 0.75 8.8 2.1 2.5 2 1 1 3 3 3 0 NMD3 family A2L_zn_ribbon PF08792.5 gi|154150017|ref|YP_001403635.1| - 0.086 12.3 8.8 0.59 9.6 0.0 4.4 4 1 1 5 5 5 0 A2L zinc ribbon domain DNA_ligase_ZBD PF03119.11 gi|154150017|ref|YP_001403635.1| - 0.43 10.3 12.4 6.3 6.5 1.7 4.3 4 0 0 4 4 4 0 NAD-dependent DNA ligase C4 zinc finger domain Prok-RING_1 PF14446.1 gi|154150017|ref|YP_001403635.1| - 0.47 10.2 21.6 0.76 9.5 1.8 4.0 1 1 3 4 4 4 0 Prokaryotic RING finger family 1 ADK_lid PF05191.9 gi|154150017|ref|YP_001403635.1| - 0.51 10.0 25.4 0.64 9.7 2.1 5.7 3 2 1 4 4 4 0 Adenylate kinase, active site lid zf-C4pol PF14260.1 gi|154150017|ref|YP_001403635.1| - 1.2 9.2 13.2 8 6.5 0.3 3.3 3 0 0 3 3 3 0 C4-type zinc-finger of DNA polymerase delta DUF3039 PF11238.3 gi|154150017|ref|YP_001403635.1| - 1.6 8.1 6.6 0.43 10.0 1.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3039) zf-NADH-PPase PF09297.6 gi|154150017|ref|YP_001403635.1| - 2 8.0 28.5 8.1 6.0 0.1 6.1 5 1 0 5 5 5 0 NADH pyrophosphatase zinc ribbon domain zf-tcix PF14952.1 gi|154150017|ref|YP_001403635.1| - 2.6 7.4 22.7 0.67 9.3 0.2 3.8 3 2 0 3 3 3 0 Putative treble-clef, zinc-finger, Zn-binding Cript PF10235.4 gi|154150017|ref|YP_001403635.1| - 3.4 8.0 14.5 0.72 10.2 1.3 3.0 1 1 2 3 3 3 0 Microtubule-associated protein CRIPT PHF5 PF03660.9 gi|154150017|ref|YP_001403635.1| - 3.9 7.5 10.6 0.49 10.4 3.4 1.9 1 1 0 2 2 2 0 PHF5-like protein OrfB_Zn_ribbon PF07282.6 gi|154150017|ref|YP_001403635.1| - 4.4 7.0 15.7 1 9.0 0.1 3.4 1 1 3 4 4 4 0 Putative transposase DNA-binding domain Zn_ribbon_2 PF12674.2 gi|154150017|ref|YP_001403635.1| - 4.4 7.7 14.9 1.3 9.3 2.4 3.6 3 1 0 4 4 4 0 Putative zinc ribbon domain Ribosomal_L37e PF01907.14 gi|154150017|ref|YP_001403635.1| - 4.6 7.1 16.7 4.7 7.0 0.3 3.8 2 1 1 3 3 3 0 Ribosomal protein L37e GFA PF04828.9 gi|154150017|ref|YP_001403635.1| - 8.7 6.3 20.3 8.1 6.4 0.1 5.1 1 1 4 5 5 5 0 Glutathione-dependent formaldehyde-activating enzyme FrhB_FdhB_C PF04432.8 gi|154150019|ref|YP_001403637.1| - 5.3e-45 152.7 0.0 7.5e-45 152.2 0.0 1.2 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.8 gi|154150019|ref|YP_001403637.1| - 9.4e-38 127.9 0.0 1.8e-37 127.0 0.0 1.5 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Oxidored_q6 PF01058.17 gi|154150020|ref|YP_001403638.1| - 1.2e-26 92.8 0.9 1.2e-26 92.8 0.6 2.3 2 1 0 2 2 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Fer4 PF00037.22 gi|154150020|ref|YP_001403638.1| - 1.3e-12 46.7 10.4 5.8e-09 35.1 2.0 4.1 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|154150020|ref|YP_001403638.1| - 4.3e-10 39.8 10.7 4.3e-10 39.8 7.4 3.0 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|154150020|ref|YP_001403638.1| - 1.7e-09 37.8 9.3 1.7e-09 37.8 6.5 2.8 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|154150020|ref|YP_001403638.1| - 4e-09 36.1 10.5 4e-09 36.1 7.3 2.6 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|154150020|ref|YP_001403638.1| - 5.2e-08 32.4 8.7 2.1e-05 24.1 1.4 3.6 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|154150020|ref|YP_001403638.1| - 1.9e-06 28.4 15.0 0.00032 21.3 0.7 3.7 4 0 0 4 4 3 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|154150020|ref|YP_001403638.1| - 2.5e-06 27.4 11.9 2.5e-06 27.4 8.3 2.9 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|154150020|ref|YP_001403638.1| - 2.6e-05 23.8 13.0 0.00017 21.3 2.2 4.3 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_15 PF13459.1 gi|154150020|ref|YP_001403638.1| - 0.0004 20.8 5.5 0.019 15.4 0.5 3.7 5 0 0 5 5 4 2 4Fe-4S single cluster domain Fer4_4 PF12800.2 gi|154150020|ref|YP_001403638.1| - 0.00071 19.7 11.3 0.0013 18.8 1.3 4.0 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|154150020|ref|YP_001403638.1| - 0.00095 18.9 23.5 0.14 12.0 6.9 3.6 2 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|154150020|ref|YP_001403638.1| - 0.014 15.7 0.9 0.014 15.7 0.7 3.7 5 0 0 5 5 4 0 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|154150020|ref|YP_001403638.1| - 0.089 13.3 4.0 0.089 13.3 2.8 4.1 4 0 0 4 4 3 0 4Fe-4S binding domain Fer4_17 PF13534.1 gi|154150020|ref|YP_001403638.1| - 0.13 12.6 23.3 0.77 10.1 9.2 3.4 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|154150020|ref|YP_001403638.1| - 3.4 8.1 27.0 1.7 9.1 2.6 3.6 2 1 1 3 3 3 0 4Fe-4S dicluster domain HycI PF01750.13 gi|154150021|ref|YP_001403639.1| - 1.8e-21 76.0 0.1 2.2e-21 75.7 0.0 1.1 1 0 0 1 1 1 1 Hydrogenase maturation protease NiFeSe_Hases PF00374.14 gi|154150022|ref|YP_001403640.1| - 2e-37 129.1 6.1 4.4e-15 55.4 0.1 3.6 1 1 2 3 3 3 3 Nickel-dependent hydrogenase GCHY-1 PF02649.9 gi|154150023|ref|YP_001403641.1| - 9.8e-90 300.5 0.6 1.1e-89 300.3 0.4 1.0 1 0 0 1 1 1 1 Type I GTP cyclohydrolase folE2 IlvN PF07991.7 gi|154150024|ref|YP_001403642.1| - 2.3e-75 251.5 0.7 3e-75 251.1 0.5 1.1 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain IlvC PF01450.14 gi|154150024|ref|YP_001403642.1| - 5.3e-55 185.3 0.1 7.5e-55 184.8 0.1 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain F420_oxidored PF03807.12 gi|154150024|ref|YP_001403642.1| - 5.9e-07 29.8 0.1 1.3e-06 28.7 0.1 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.10 gi|154150024|ref|YP_001403642.1| - 1e-06 28.6 0.0 2.2e-06 27.6 0.0 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase AdoHcyase_NAD PF00670.16 gi|154150024|ref|YP_001403642.1| - 1.1e-06 28.6 0.0 2.5e-06 27.4 0.0 1.6 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.14 gi|154150024|ref|YP_001403642.1| - 1.2e-05 24.5 0.0 2e-05 23.7 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ApbA PF02558.11 gi|154150024|ref|YP_001403642.1| - 0.031 13.7 0.2 0.084 12.3 0.1 1.8 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA SRF-TF PF00319.13 gi|154150024|ref|YP_001403642.1| - 0.045 12.9 0.0 0.33 10.2 0.0 2.3 2 0 0 2 2 2 0 SRF-type transcription factor (DNA-binding and dimerisation domain) Flavodoxin_3 PF12641.2 gi|154150025|ref|YP_001403643.1| - 1.6e-11 43.9 0.0 2.1e-06 27.2 0.0 2.2 1 1 1 2 2 2 2 Flavodoxin domain FMN_red PF03358.10 gi|154150025|ref|YP_001403643.1| - 1.5e-10 40.7 0.0 1.9e-10 40.4 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_5 PF12724.2 gi|154150025|ref|YP_001403643.1| - 2.2e-08 34.2 0.0 0.00077 19.4 0.0 2.1 1 1 1 2 2 2 2 Flavodoxin domain Flavodoxin_4 PF12682.2 gi|154150025|ref|YP_001403643.1| - 2.2e-07 30.3 0.0 3.5e-07 29.7 0.0 1.4 1 1 0 1 1 1 1 Flavodoxin Flavodoxin_2 PF02525.12 gi|154150025|ref|YP_001403643.1| - 4.1e-05 23.1 0.0 9.4e-05 22.0 0.0 1.7 1 1 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_1 PF00258.20 gi|154150025|ref|YP_001403643.1| - 0.0016 18.4 0.0 0.0064 16.4 0.0 2.1 1 1 0 1 1 1 1 Flavodoxin eIF-5_eIF-2B PF01873.12 gi|154150026|ref|YP_001403644.1| - 3.5e-38 130.0 0.0 5e-38 129.5 0.0 1.1 1 0 0 1 1 1 1 Domain found in IF2B/IF5 TRAM PF01938.15 gi|154150026|ref|YP_001403644.1| - 4.4e-05 23.1 0.1 0.00011 21.9 0.1 1.7 1 0 0 1 1 1 1 TRAM domain Zn-ribbon_8 PF09723.5 gi|154150026|ref|YP_001403644.1| - 0.0056 16.6 0.5 0.01 15.7 0.3 1.4 1 0 0 1 1 1 1 Zinc ribbon domain DNA_RNApol_7kD PF03604.8 gi|154150026|ref|YP_001403644.1| - 0.7 9.4 3.6 2.5 7.6 2.5 1.9 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit RNA_pol_L_2 PF13656.1 gi|154150027|ref|YP_001403645.1| - 6.3e-20 70.3 0.1 7.2e-20 70.2 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L PF01193.19 gi|154150027|ref|YP_001403645.1| - 1.5e-07 30.3 0.0 2.1e-07 29.9 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Lactamase_B_2 PF12706.2 gi|154150028|ref|YP_001403646.1| - 3.2e-22 79.0 0.1 4.2e-22 78.6 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|154150028|ref|YP_001403646.1| - 5.2e-17 62.1 0.2 7.1e-17 61.6 0.1 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.1 gi|154150028|ref|YP_001403646.1| - 9.5e-12 44.9 0.0 1.5e-11 44.2 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain AAA PF00004.24 gi|154150029|ref|YP_001403647.1| - 1.3e-35 122.5 0.0 2.2e-35 121.7 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.7 gi|154150029|ref|YP_001403647.1| - 7.5e-07 28.4 0.0 3.1e-06 26.4 0.0 1.9 1 1 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus AAA_25 PF13481.1 gi|154150029|ref|YP_001403647.1| - 2.4e-06 27.0 0.0 0.00045 19.6 0.0 2.9 2 1 1 3 3 3 1 AAA domain AAA_5 PF07728.9 gi|154150029|ref|YP_001403647.1| - 1.5e-05 24.7 0.1 6.4e-05 22.7 0.0 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) IstB_IS21 PF01695.12 gi|154150029|ref|YP_001403647.1| - 6.2e-05 22.4 0.0 0.00011 21.6 0.0 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_17 PF13207.1 gi|154150029|ref|YP_001403647.1| - 0.00026 21.8 0.1 0.0018 19.0 0.0 2.4 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|154150029|ref|YP_001403647.1| - 0.00092 19.2 0.2 0.097 12.6 0.0 2.7 1 1 1 2 2 2 1 AAA ATPase domain TIP49 PF06068.8 gi|154150029|ref|YP_001403647.1| - 0.0023 16.7 0.0 0.0053 15.5 0.0 1.4 1 1 1 2 2 2 1 TIP49 C-terminus ABC_tran PF00005.22 gi|154150029|ref|YP_001403647.1| - 0.0059 16.8 0.0 0.012 15.8 0.0 1.5 1 0 0 1 1 1 1 ABC transporter DUF815 PF05673.8 gi|154150029|ref|YP_001403647.1| - 0.006 15.5 0.0 0.0086 15.0 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_22 PF13401.1 gi|154150029|ref|YP_001403647.1| - 0.0071 16.4 0.4 0.89 9.6 0.0 2.6 1 1 1 2 2 2 1 AAA domain AAA_14 PF13173.1 gi|154150029|ref|YP_001403647.1| - 0.0081 16.0 0.0 0.016 15.1 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.1 gi|154150029|ref|YP_001403647.1| - 0.0095 15.8 0.0 0.03 14.1 0.0 1.9 1 1 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.18 gi|154150029|ref|YP_001403647.1| - 0.015 15.2 0.0 0.027 14.4 0.0 1.4 1 0 0 1 1 1 0 50S ribosome-binding GTPase Mg_chelatase PF01078.16 gi|154150029|ref|YP_001403647.1| - 0.026 13.6 0.1 0.065 12.3 0.0 1.6 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_2 PF07724.9 gi|154150029|ref|YP_001403647.1| - 0.027 14.3 0.0 0.058 13.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) AAA_19 PF13245.1 gi|154150029|ref|YP_001403647.1| - 0.04 13.6 0.7 0.11 12.2 0.2 1.9 1 1 1 2 2 2 0 Part of AAA domain PhoH PF02562.11 gi|154150029|ref|YP_001403647.1| - 0.044 13.0 0.0 0.1 11.8 0.0 1.6 1 0 0 1 1 1 0 PhoH-like protein AAA_28 PF13521.1 gi|154150029|ref|YP_001403647.1| - 0.046 13.6 0.0 0.12 12.3 0.0 1.7 2 0 0 2 2 1 0 AAA domain AAA_11 PF13086.1 gi|154150029|ref|YP_001403647.1| - 0.069 12.7 0.0 0.11 12.0 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.1 gi|154150029|ref|YP_001403647.1| - 0.078 13.2 0.1 0.22 11.8 0.0 1.9 2 1 0 2 2 1 0 AAA domain NACHT PF05729.7 gi|154150029|ref|YP_001403647.1| - 0.091 12.4 0.1 10 5.7 0.0 2.9 2 1 1 3 3 3 0 NACHT domain Sigma54_activ_2 PF14532.1 gi|154150029|ref|YP_001403647.1| - 0.093 12.7 0.0 0.32 11.0 0.0 1.8 1 1 0 1 1 1 0 Sigma-54 interaction domain AAA_24 PF13479.1 gi|154150029|ref|YP_001403647.1| - 0.11 12.0 0.1 0.23 11.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.7 gi|154150029|ref|YP_001403647.1| - 0.13 11.3 0.0 0.31 10.0 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin Peptidase_M24 PF00557.19 gi|154150030|ref|YP_001403648.1| - 6.1e-41 140.2 0.1 8e-41 139.8 0.0 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 Cas_Csa5 PF09702.5 gi|154150030|ref|YP_001403648.1| - 0.053 13.5 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csa5) Peptidase_M24 PF00557.19 gi|154150031|ref|YP_001403649.1| - 1.1e-38 132.8 0.8 1.6e-38 132.3 0.5 1.3 1 0 0 1 1 1 1 Metallopeptidase family M24 DUF3169 PF11368.3 gi|154150032|ref|YP_001403650.1| - 0.025 13.7 0.7 0.03 13.5 0.5 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF3169) DUF1275 PF06912.6 gi|154150032|ref|YP_001403650.1| - 0.035 13.3 0.2 0.037 13.2 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1275) DUF4231 PF14015.1 gi|154150032|ref|YP_001403650.1| - 0.14 12.1 0.7 0.17 11.9 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4231) DUF3329 PF11808.3 gi|154150032|ref|YP_001403650.1| - 0.4 10.8 4.7 0.61 10.2 3.3 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF3329) DUF2628 PF10947.3 gi|154150032|ref|YP_001403650.1| - 0.44 10.3 5.4 0.51 10.1 3.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2628) DUF4131 PF13567.1 gi|154150032|ref|YP_001403650.1| - 0.57 9.5 7.0 0.63 9.4 4.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) IncA PF04156.9 gi|154150032|ref|YP_001403650.1| - 1.6 8.3 3.4 1.9 8.0 2.4 1.1 1 0 0 1 1 1 0 IncA protein GspL_C PF12693.2 gi|154150032|ref|YP_001403650.1| - 2.4 7.8 5.1 4.8 6.9 0.2 2.0 2 0 0 2 2 2 0 GspL periplasmic domain TrmB PF01978.14 gi|154150033|ref|YP_001403651.1| - 0.014 15.1 0.0 0.019 14.6 0.0 1.4 1 1 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Ribosomal_S19e PF01090.14 gi|154150033|ref|YP_001403651.1| - 0.026 13.9 0.0 1.5 8.2 0.0 2.1 1 1 1 2 2 2 0 Ribosomal protein S19e Phage_rep_org_N PF09681.5 gi|154150033|ref|YP_001403651.1| - 0.063 12.8 0.0 0.072 12.6 0.0 1.3 1 0 0 1 1 1 0 N-terminal phage replisome organiser (Phage_rep_org_N) HTH_20 PF12840.2 gi|154150033|ref|YP_001403651.1| - 0.064 13.0 0.1 0.19 11.5 0.0 1.8 1 1 0 1 1 1 0 Helix-turn-helix domain Ldh_1_N PF00056.18 gi|154150035|ref|YP_001403653.1| - 3.7e-31 107.8 0.1 5.1e-31 107.3 0.0 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.13 gi|154150035|ref|YP_001403653.1| - 1.5e-28 99.6 0.1 2.3e-28 99.1 0.0 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Semialdhyde_dh PF01118.19 gi|154150035|ref|YP_001403653.1| - 0.0025 18.1 0.0 0.0046 17.2 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain DUF1512 PF07431.7 gi|154150035|ref|YP_001403653.1| - 0.03 13.0 0.1 0.043 12.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1512) DapB_N PF01113.15 gi|154150035|ref|YP_001403653.1| - 0.059 13.2 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus EF1_GNE PF00736.14 gi|154150036|ref|YP_001403654.1| - 6.3e-21 73.8 0.1 6.8e-21 73.7 0.0 1.0 1 0 0 1 1 1 1 EF-1 guanine nucleotide exchange domain DUF1610 PF07754.6 gi|298206421|ref|YP_003717808.1| - 4.5e-13 49.0 17.1 2.1e-06 27.7 4.3 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF1610) DUF1272 PF06906.6 gi|298206421|ref|YP_003717808.1| - 4e-05 23.3 10.5 5.9e-05 22.8 7.3 1.2 1 1 0 1 1 1 1 Protein of unknown function (DUF1272) DZR PF12773.2 gi|298206421|ref|YP_003717808.1| - 0.001 18.8 13.0 0.066 13.0 9.0 2.2 1 1 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.1 gi|298206421|ref|YP_003717808.1| - 0.0042 16.5 1.0 0.0042 16.5 0.7 2.7 3 0 0 3 3 3 2 zinc-ribbon domain OrfB_Zn_ribbon PF07282.6 gi|298206421|ref|YP_003717808.1| - 0.011 15.3 0.8 0.011 15.3 0.5 2.1 1 1 1 2 2 2 0 Putative transposase DNA-binding domain C1_1 PF00130.17 gi|298206421|ref|YP_003717808.1| - 0.023 14.4 0.6 0.023 14.4 0.4 2.2 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Auto_anti-p27 PF06677.7 gi|298206421|ref|YP_003717808.1| - 0.031 14.0 9.4 0.08 12.7 1.1 2.8 2 1 1 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-ribbon_3 PF13248.1 gi|298206421|ref|YP_003717808.1| - 0.049 12.8 16.7 0.045 12.9 2.9 3.0 3 1 0 3 3 3 0 zinc-ribbon domain C1_3 PF07649.7 gi|298206421|ref|YP_003717808.1| - 0.052 13.5 4.6 0.052 13.5 3.2 2.6 1 1 2 3 3 3 0 C1-like domain FYVE_2 PF02318.11 gi|298206421|ref|YP_003717808.1| - 0.15 11.9 4.7 0.16 11.8 3.2 1.0 1 0 0 1 1 1 0 FYVE-type zinc finger PhnA_Zn_Ribbon PF08274.7 gi|298206421|ref|YP_003717808.1| - 0.15 11.8 9.4 0.96 9.2 1.2 2.7 2 2 0 2 2 2 0 PhnA Zinc-Ribbon PolC_DP2 PF03833.8 gi|298206421|ref|YP_003717808.1| - 0.16 9.5 7.3 0.19 9.3 5.1 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 Zn_Tnp_IS91 PF14319.1 gi|298206421|ref|YP_003717808.1| - 0.33 10.4 9.0 0.55 9.7 6.2 1.4 1 1 0 1 1 1 0 Transposase zinc-binding domain A2L_zn_ribbon PF08792.5 gi|298206421|ref|YP_003717808.1| - 0.45 10.0 11.0 4 7.0 2.1 3.2 2 1 1 3 3 3 0 A2L zinc ribbon domain zf-RING_3 PF14369.1 gi|298206421|ref|YP_003717808.1| - 0.48 10.4 14.0 5 7.2 1.3 3.2 2 2 0 2 2 2 0 zinc-finger zf-Mss51 PF13824.1 gi|298206421|ref|YP_003717808.1| - 0.53 10.1 11.9 8.5 6.3 3.9 2.4 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 Prok-RING_1 PF14446.1 gi|298206421|ref|YP_003717808.1| - 0.55 10.0 12.3 0.18 11.5 1.9 2.6 1 1 1 2 2 2 0 Prokaryotic RING finger family 1 zf-UBP PF02148.14 gi|298206421|ref|YP_003717808.1| - 0.61 10.2 4.4 0.87 9.7 0.2 2.1 2 0 0 2 2 2 0 Zn-finger in ubiquitin-hydrolases and other protein zf-RING_5 PF14634.1 gi|298206421|ref|YP_003717808.1| - 0.67 9.7 11.3 7.7 6.3 7.8 2.4 1 1 0 1 1 1 0 zinc-RING finger domain Carla_C4 PF01623.12 gi|298206421|ref|YP_003717808.1| - 0.85 9.4 5.0 1 9.1 3.5 1.1 1 0 0 1 1 1 0 Carlavirus putative nucleic acid binding protein zf-RING_4 PF14570.1 gi|298206421|ref|YP_003717808.1| - 1 8.9 9.8 1.9 8.1 6.8 1.6 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain Tnp_zf-ribbon_2 PF13842.1 gi|298206421|ref|YP_003717808.1| - 1.1 9.7 11.1 1.8e+02 2.6 7.7 2.5 1 1 0 1 1 1 0 DDE_Tnp_1-like zinc-ribbon zinc-ribbons_6 PF07191.7 gi|298206421|ref|YP_003717808.1| - 1.3 8.9 10.8 8.5 6.2 7.5 1.9 1 1 0 1 1 1 0 zinc-ribbons zf-C3HC4_3 PF13920.1 gi|298206421|ref|YP_003717808.1| - 1.5 8.5 12.4 1.8 8.3 1.1 2.5 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C4_Topoisom PF01396.14 gi|298206421|ref|YP_003717808.1| - 1.8 8.1 11.5 8.2 6.0 0.2 3.3 3 1 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger ADK_lid PF05191.9 gi|298206421|ref|YP_003717808.1| - 2.6 7.7 10.1 3.8 7.2 0.1 3.4 3 1 0 3 3 3 0 Adenylate kinase, active site lid PHD PF00628.24 gi|298206421|ref|YP_003717808.1| - 2.9 7.6 9.5 12 5.6 6.6 2.1 1 1 0 1 1 1 0 PHD-finger DUF2296 PF10058.4 gi|298206421|ref|YP_003717808.1| - 3.5 7.4 13.5 12 5.7 0.8 3.1 1 1 1 2 2 2 0 Predicted integral membrane metal-binding protein (DUF2296) NMD3 PF04981.8 gi|298206421|ref|YP_003717808.1| - 3.9 6.5 8.4 4.7 6.2 5.8 1.0 1 0 0 1 1 1 0 NMD3 family TF_Zn_Ribbon PF08271.7 gi|298206421|ref|YP_003717808.1| - 4.8 6.5 14.1 1 8.7 1.1 2.7 1 1 1 2 2 2 0 TFIIB zinc-binding NOB1_Zn_bind PF08772.6 gi|298206421|ref|YP_003717808.1| - 6.1 6.7 11.3 2.8 7.8 1.1 2.1 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like Zn-ribbon_8 PF09723.5 gi|298206421|ref|YP_003717808.1| - 6.4 6.8 16.8 2.9 7.9 6.6 3.0 1 1 0 2 2 2 0 Zinc ribbon domain zf-FPG_IleRS PF06827.9 gi|298206421|ref|YP_003717808.1| - 6.6 6.4 11.7 0.71 9.5 0.3 3.1 2 1 1 3 3 3 0 Zinc finger found in FPG and IleRS DNA_RNApol_7kD PF03604.8 gi|298206421|ref|YP_003717808.1| - 7.5 6.1 10.5 2.1 7.8 0.2 3.0 2 1 1 3 3 3 0 DNA directed RNA polymerase, 7 kDa subunit Nudix_N_2 PF14803.1 gi|298206421|ref|YP_003717808.1| - 8.7 6.1 13.6 23 4.7 6.1 2.9 2 1 0 2 2 2 0 Nudix N-terminal YhfH PF14149.1 gi|298206421|ref|YP_003717808.1| - 9.3 6.1 11.5 14 5.5 0.1 3.2 3 1 0 3 3 3 0 YhfH-like protein zf-B_box PF00643.19 gi|298206421|ref|YP_003717808.1| - 9.4 6.2 10.2 38 4.2 4.0 2.7 1 1 1 2 2 2 0 B-box zinc finger AA_kinase PF00696.23 gi|154150037|ref|YP_001403655.1| - 5.8e-11 42.4 0.0 6.7e-05 22.5 0.0 2.1 1 1 1 2 2 2 2 Amino acid kinase family PLDc_2 PF13091.1 gi|154150038|ref|YP_001403656.1| - 7.4e-34 116.2 0.0 8.7e-19 67.5 0.0 2.2 2 0 0 2 2 2 2 PLD-like domain PLDc PF00614.17 gi|154150038|ref|YP_001403656.1| - 9.9e-07 28.3 2.1 0.015 15.0 0.4 2.5 2 0 0 2 2 2 2 Phospholipase D Active site motif Regulator_TrmB PF11495.3 gi|154150038|ref|YP_001403656.1| - 4.5e-05 22.5 0.0 0.087 11.7 0.0 2.5 2 1 0 2 2 2 2 Archaeal transcriptional regulator TrmB HTH_3 PF01381.17 gi|154150039|ref|YP_001403657.1| - 8.8e-07 28.6 0.2 1.4e-06 28.0 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix HTH_37 PF13744.1 gi|154150039|ref|YP_001403657.1| - 1.4e-05 24.7 0.0 2e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.1 gi|154150039|ref|YP_001403657.1| - 2.2e-05 23.9 0.1 3.8e-05 23.1 0.1 1.5 2 0 0 2 2 2 1 Homeodomain-like domain HTH_31 PF13560.1 gi|154150039|ref|YP_001403657.1| - 0.00022 21.3 0.2 0.0003 20.9 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.1 gi|154150039|ref|YP_001403657.1| - 0.00033 19.9 0.1 0.00043 19.6 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.2 gi|154150039|ref|YP_001403657.1| - 0.00042 19.9 0.1 0.00068 19.2 0.1 1.3 1 0 0 1 1 1 1 MarR family HTH_19 PF12844.2 gi|154150039|ref|YP_001403657.1| - 0.00043 20.2 0.0 0.00057 19.8 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4_2 PF08281.7 gi|154150039|ref|YP_001403657.1| - 0.00043 19.6 0.1 0.00062 19.1 0.0 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.11 gi|154150039|ref|YP_001403657.1| - 0.00074 18.7 0.0 0.001 18.3 0.0 1.2 1 0 0 1 1 1 1 Sigma-70, region 4 DUF134 PF02001.11 gi|154150039|ref|YP_001403657.1| - 0.00096 19.0 0.1 0.0011 18.8 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF134 HTH_28 PF13518.1 gi|154150039|ref|YP_001403657.1| - 0.0015 18.4 0.1 0.0022 17.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_1 PF00126.22 gi|154150039|ref|YP_001403657.1| - 0.0016 18.1 0.1 0.0023 17.6 0.1 1.2 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_8 PF02954.14 gi|154150039|ref|YP_001403657.1| - 0.02 14.3 0.1 0.031 13.8 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, Fis family HTH_11 PF08279.7 gi|154150039|ref|YP_001403657.1| - 0.027 14.1 0.0 0.041 13.5 0.0 1.3 1 0 0 1 1 1 0 HTH domain HTH_17 PF12728.2 gi|154150039|ref|YP_001403657.1| - 0.029 14.6 0.3 0.066 13.4 0.0 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_38 PF13936.1 gi|154150039|ref|YP_001403657.1| - 0.029 13.9 0.0 0.039 13.5 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain LacI PF00356.16 gi|154150039|ref|YP_001403657.1| - 0.032 13.8 0.9 0.13 11.9 0.1 2.0 1 1 1 2 2 2 0 Bacterial regulatory proteins, lacI family Cro PF09048.5 gi|154150039|ref|YP_001403657.1| - 0.041 13.5 0.5 0.053 13.1 0.1 1.5 2 0 0 2 2 2 0 Cro KorB PF08535.5 gi|154150039|ref|YP_001403657.1| - 0.052 13.7 0.0 0.078 13.1 0.0 1.2 1 0 0 1 1 1 0 KorB domain P22_Cro PF14549.1 gi|154150039|ref|YP_001403657.1| - 0.053 13.2 0.0 0.084 12.6 0.0 1.3 1 0 0 1 1 1 0 DNA-binding transcriptional regulator Cro HTH_IclR PF09339.5 gi|154150039|ref|YP_001403657.1| - 0.072 12.6 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_29 PF13551.1 gi|154150039|ref|YP_001403657.1| - 0.073 13.2 0.1 0.087 12.9 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn helix HTH_Crp_2 PF13545.1 gi|154150039|ref|YP_001403657.1| - 0.091 12.5 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_5 PF01022.15 gi|154150039|ref|YP_001403657.1| - 0.1 12.2 0.4 0.28 10.8 0.0 1.9 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family MarR PF01047.17 gi|154150039|ref|YP_001403657.1| - 0.11 12.1 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 MarR family MarR_2 PF12802.2 gi|154150040|ref|YP_001403658.1| - 0.00016 21.2 0.0 0.0002 20.9 0.0 1.1 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.1 gi|154150040|ref|YP_001403658.1| - 0.00076 18.8 0.1 0.0016 17.7 0.0 1.6 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding TFIIE_alpha PF02002.12 gi|154150040|ref|YP_001403658.1| - 0.0036 16.7 0.0 0.0042 16.5 0.0 1.1 1 0 0 1 1 1 1 TFIIE alpha subunit MarR PF01047.17 gi|154150040|ref|YP_001403658.1| - 0.0045 16.6 0.1 0.0087 15.7 0.1 1.5 1 1 1 2 2 2 1 MarR family HTH_27 PF13463.1 gi|154150040|ref|YP_001403658.1| - 0.019 15.2 0.0 0.025 14.9 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_20 PF12840.2 gi|154150040|ref|YP_001403658.1| - 0.034 13.9 0.1 0.052 13.3 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_12 PF08461.5 gi|154150040|ref|YP_001403658.1| - 0.037 13.7 0.2 0.049 13.3 0.1 1.4 1 1 0 1 1 1 0 Ribonuclease R winged-helix domain B-block_TFIIIC PF04182.7 gi|154150040|ref|YP_001403658.1| - 0.11 12.3 0.0 0.14 12.0 0.0 1.2 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC tRNA_anti-codon PF01336.20 gi|154150041|ref|YP_001403659.1| - 0.0043 16.8 0.2 0.023 14.5 0.1 1.9 1 1 1 2 2 2 1 OB-fold nucleic acid binding domain Regulator_TrmB PF11495.3 gi|154150041|ref|YP_001403659.1| - 0.02 13.8 0.6 0.052 12.5 0.4 1.7 1 1 0 1 1 1 0 Archaeal transcriptional regulator TrmB QRPTase_C PF01729.14 gi|154150042|ref|YP_001403660.1| - 5e-49 166.0 0.3 6.5e-49 165.7 0.2 1.1 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.11 gi|154150042|ref|YP_001403660.1| - 7.8e-24 83.3 0.0 1.3e-23 82.5 0.0 1.4 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain Biotin_lipoyl_2 PF13533.1 gi|154150042|ref|YP_001403660.1| - 0.034 13.8 0.0 0.082 12.5 0.0 1.6 1 0 0 1 1 1 0 Biotin-lipoyl like DUF108 PF01958.13 gi|154150043|ref|YP_001403661.1| - 5.6e-31 106.6 0.0 1e-30 105.7 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function DUF108 NAD_binding_3 PF03447.11 gi|154150043|ref|YP_001403661.1| - 1.3e-18 67.5 1.0 1.7e-18 67.1 0.2 1.5 2 0 0 2 2 2 1 Homoserine dehydrogenase, NAD binding domain DapB_N PF01113.15 gi|154150043|ref|YP_001403661.1| - 2.3e-06 27.5 0.1 5.5e-06 26.3 0.1 1.6 2 0 0 2 2 2 1 Dihydrodipicolinate reductase, N-terminus GFO_IDH_MocA PF01408.17 gi|154150043|ref|YP_001403661.1| - 6.5e-05 23.4 0.2 0.0001 22.8 0.1 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold F420_oxidored PF03807.12 gi|154150043|ref|YP_001403661.1| - 0.00014 22.2 0.2 0.00026 21.3 0.2 1.4 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.14 gi|154150043|ref|YP_001403661.1| - 0.001 18.2 0.1 0.0014 17.7 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.10 gi|154150043|ref|YP_001403661.1| - 0.015 15.1 0.1 0.021 14.6 0.1 1.3 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase Semialdhyde_dh PF01118.19 gi|154150043|ref|YP_001403661.1| - 0.02 15.1 0.1 0.03 14.6 0.0 1.3 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain Gp_dh_N PF00044.19 gi|154150043|ref|YP_001403661.1| - 0.04 13.8 0.6 0.69 9.8 0.4 2.0 1 1 1 2 2 2 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YopH_N PF09013.5 gi|154150043|ref|YP_001403661.1| - 0.11 12.1 0.1 0.19 11.4 0.1 1.3 1 0 0 1 1 1 0 YopH, N-terminal Radical_SAM PF04055.16 gi|154150044|ref|YP_001403662.1| - 2.2e-22 80.0 0.0 7e-22 78.3 0.0 1.8 2 0 0 2 2 2 1 Radical SAM superfamily UPF0004 PF00919.15 gi|154150044|ref|YP_001403662.1| - 3.1e-18 65.4 0.0 5.5e-18 64.6 0.0 1.4 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 MmoB_DmpM PF02406.12 gi|154150044|ref|YP_001403662.1| - 0.12 12.3 0.0 0.49 10.4 0.0 1.9 2 0 0 2 2 2 0 MmoB/DmpM family TPP_enzyme_C PF02775.16 gi|154150046|ref|YP_001403664.1| - 5.9e-30 103.8 1.1 1.2e-29 102.8 0.8 1.6 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.14 gi|154150046|ref|YP_001403664.1| - 2.6e-07 30.3 0.0 8.1e-07 28.7 0.0 1.7 1 1 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Fer4 PF00037.22 gi|154150046|ref|YP_001403664.1| - 4.4e-07 29.2 17.5 0.00011 21.6 2.1 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|154150046|ref|YP_001403664.1| - 2e-05 24.2 12.1 0.013 15.3 1.2 3.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|154150046|ref|YP_001403664.1| - 3.1e-05 23.7 11.2 0.00015 21.5 7.5 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|154150046|ref|YP_001403664.1| - 0.00021 21.0 9.8 0.00021 21.0 6.8 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|154150046|ref|YP_001403664.1| - 0.00079 19.2 3.0 0.00079 19.2 2.1 3.9 5 0 0 5 5 3 1 4Fe-4S binding domain Fer4_7 PF12838.2 gi|154150046|ref|YP_001403664.1| - 0.0019 18.5 12.2 0.0019 18.5 8.4 2.9 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|154150046|ref|YP_001403664.1| - 0.0026 17.9 11.0 0.0026 17.9 7.6 2.4 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|154150046|ref|YP_001403664.1| - 0.021 15.5 7.1 0.026 15.2 0.5 2.6 2 0 0 2 2 2 0 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|154150046|ref|YP_001403664.1| - 0.033 14.2 9.3 0.12 12.4 6.5 2.0 1 0 0 1 1 1 0 4Fe-4S dicluster domain DXP_synthase_N PF13292.1 gi|154150046|ref|YP_001403664.1| - 0.044 12.7 0.6 1.2 8.0 0.5 2.1 1 1 1 2 2 2 0 1-deoxy-D-xylulose-5-phosphate synthase TPP_enzyme_N PF02776.13 gi|154150046|ref|YP_001403664.1| - 0.075 12.5 0.4 0.31 10.5 0.0 2.2 3 0 0 3 3 3 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Fer4_17 PF13534.1 gi|154150046|ref|YP_001403664.1| - 0.39 11.0 10.4 4.2 7.7 1.4 2.8 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|154150046|ref|YP_001403664.1| - 3.7 8.1 23.3 0.11 12.9 1.3 3.6 4 0 0 4 4 3 0 4Fe-4S binding domain Fer4_18 PF13746.1 gi|154150046|ref|YP_001403664.1| - 5.4 7.5 16.3 3.3 8.2 2.1 2.7 1 1 1 2 2 2 0 4Fe-4S dicluster domain POR PF01558.13 gi|154150047|ref|YP_001403665.1| - 2.7e-35 121.8 0.0 3.2e-35 121.5 0.0 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase N6_N4_Mtase PF01555.13 gi|154150048|ref|YP_001403666.1| - 6e-35 120.8 0.0 5e-34 117.7 0.0 1.9 1 1 0 1 1 1 1 DNA methylase Methyltransf_26 PF13659.1 gi|154150048|ref|YP_001403666.1| - 3.1e-15 56.2 0.1 2.8e-07 30.5 0.0 2.2 2 0 0 2 2 2 2 Methyltransferase domain UPF0020 PF01170.13 gi|154150048|ref|YP_001403666.1| - 1e-06 28.4 0.0 0.016 14.7 0.0 2.3 2 0 0 2 2 2 2 Putative RNA methylase family UPF0020 Cons_hypoth95 PF03602.10 gi|154150048|ref|YP_001403666.1| - 0.044 13.1 0.0 0.61 9.4 0.0 2.1 2 0 0 2 2 2 0 Conserved hypothetical protein 95 MTS PF05175.9 gi|154150048|ref|YP_001403666.1| - 0.095 12.0 0.0 0.47 9.8 0.0 2.0 1 1 0 1 1 1 0 Methyltransferase small domain Phage_integrase PF00589.17 gi|154150049|ref|YP_001403667.1| - 1.9e-24 86.2 0.0 4e-24 85.2 0.0 1.5 1 0 0 1 1 1 1 Phage integrase family DZR PF12773.2 gi|154150049|ref|YP_001403667.1| - 0.027 14.2 1.4 0.062 13.1 1.0 1.5 1 0 0 1 1 1 0 Double zinc ribbon zf-tcix PF14952.1 gi|154150049|ref|YP_001403667.1| - 0.043 13.1 1.9 0.086 12.1 1.3 1.5 1 0 0 1 1 1 0 Putative treble-clef, zinc-finger, Zn-binding zf-ribbon_3 PF13248.1 gi|154150049|ref|YP_001403667.1| - 0.068 12.3 2.0 0.16 11.2 1.4 1.6 1 0 0 1 1 1 0 zinc-ribbon domain DUF4414 PF14377.1 gi|154150050|ref|YP_001403668.1| - 0.018 14.9 0.2 0.23 11.4 0.1 2.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4414) RHH_1 PF01402.16 gi|154150050|ref|YP_001403668.1| - 0.048 13.5 2.3 0.2 11.5 0.0 3.2 5 1 1 6 6 6 0 Ribbon-helix-helix protein, copG family PqqD PF05402.7 gi|154150050|ref|YP_001403668.1| - 0.089 12.8 0.2 14 5.7 0.0 2.8 3 0 0 3 3 3 0 Coenzyme PQQ synthesis protein D (PqqD) PTPlike_phytase PF14566.1 gi|154150050|ref|YP_001403668.1| - 0.099 12.6 0.6 0.18 11.8 0.3 1.5 1 1 0 1 1 1 0 Inositol hexakisphosphate VIT1 PF01988.14 gi|154150050|ref|YP_001403668.1| - 0.12 11.8 0.1 0.2 11.1 0.0 1.3 1 0 0 1 1 1 0 VIT family zf-ribbon_3 PF13248.1 gi|154150054|ref|YP_001403672.1| - 3.2e-08 32.5 2.2 4.5e-08 32.0 1.6 1.2 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|154150054|ref|YP_001403672.1| - 9.2e-08 31.3 2.9 1.6e-07 30.6 2.0 1.4 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.2 gi|154150054|ref|YP_001403672.1| - 3.2e-06 26.8 0.9 4.3e-06 26.4 0.6 1.2 1 0 0 1 1 1 1 Double zinc ribbon Nudix_N_2 PF14803.1 gi|154150054|ref|YP_001403672.1| - 0.012 15.2 1.7 2.2 8.0 0.0 2.2 2 0 0 2 2 2 0 Nudix N-terminal GFA PF04828.9 gi|154150054|ref|YP_001403672.1| - 0.02 14.8 2.2 0.14 12.0 0.0 2.2 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme DivIC PF04977.10 gi|154150054|ref|YP_001403672.1| - 0.039 13.4 0.4 0.11 11.9 0.0 1.8 2 0 0 2 2 2 0 Septum formation initiator Val_tRNA-synt_C PF10458.4 gi|154150054|ref|YP_001403672.1| - 0.042 13.9 2.2 0.082 12.9 1.5 1.4 1 0 0 1 1 1 0 Valyl tRNA synthetase tRNA binding arm FlxA PF14282.1 gi|154150054|ref|YP_001403672.1| - 0.077 12.9 1.0 3.7 7.5 0.0 2.1 2 0 0 2 2 2 0 FlxA-like protein DUF2681 PF10883.3 gi|154150054|ref|YP_001403672.1| - 0.1 12.7 0.0 0.26 11.5 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2681) Prok-RING_1 PF14446.1 gi|154150054|ref|YP_001403672.1| - 0.14 11.9 2.1 0.21 11.3 1.5 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 zf-RanBP PF00641.13 gi|154150054|ref|YP_001403672.1| - 0.15 11.2 3.7 0.25 10.4 2.6 1.3 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others RRN7 PF11781.3 gi|154150054|ref|YP_001403672.1| - 0.19 11.2 3.7 0.9 9.0 0.2 2.3 2 0 0 2 2 2 0 RNA polymerase I-specific transcription initiation factor Rrn7 CcmH PF03918.9 gi|154150054|ref|YP_001403672.1| - 0.24 10.4 0.9 0.35 9.8 0.0 1.7 2 0 0 2 2 2 0 Cytochrome C biogenesis protein zf-tcix PF14952.1 gi|154150054|ref|YP_001403672.1| - 0.41 10.0 2.6 0.99 8.7 1.8 1.6 1 1 0 1 1 1 0 Putative treble-clef, zinc-finger, Zn-binding A2L_zn_ribbon PF08792.5 gi|154150054|ref|YP_001403672.1| - 3.5 7.1 6.8 4.9 6.7 0.7 2.4 1 1 1 2 2 2 0 A2L zinc ribbon domain NOB1_Zn_bind PF08772.6 gi|154150054|ref|YP_001403672.1| - 6.3 6.6 7.2 10 6.0 0.4 2.3 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like zinc_ribbon_2 PF13240.1 gi|154150055|ref|YP_001403673.1| - 3.6e-07 29.4 5.0 3.6e-07 29.4 3.5 2.0 2 0 0 2 2 2 1 zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|154150055|ref|YP_001403673.1| - 1.1e-06 27.6 4.4 1.1e-06 27.6 3.0 1.9 2 0 0 2 2 2 1 zinc-ribbon domain DZR PF12773.2 gi|154150055|ref|YP_001403673.1| - 6.6e-06 25.8 2.6 6.6e-06 25.8 1.8 1.6 2 0 0 2 2 2 1 Double zinc ribbon TMEM18 PF14770.1 gi|154150055|ref|YP_001403673.1| - 0.029 13.9 0.0 0.044 13.3 0.0 1.2 1 0 0 1 1 1 0 Transmembrane protein 18 DUF1579 PF07617.6 gi|154150055|ref|YP_001403673.1| - 0.079 12.6 0.1 0.14 11.7 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1579) UPF0547 PF10571.4 gi|154150055|ref|YP_001403673.1| - 0.25 11.0 1.7 0.52 10.0 1.2 1.5 1 0 0 1 1 1 0 Uncharacterised protein family UPF0547 Nudix_N_2 PF14803.1 gi|154150055|ref|YP_001403673.1| - 0.31 10.7 2.3 14 5.4 0.0 2.6 2 0 0 2 2 2 0 Nudix N-terminal TruB_N PF01509.13 gi|154150056|ref|YP_001403674.1| - 7.7e-24 84.5 0.1 1.9e-13 50.8 0.0 3.2 1 1 1 2 2 2 2 TruB family pseudouridylate synthase (N terminal domain) PUA PF01472.15 gi|154150056|ref|YP_001403674.1| - 9.3e-10 38.1 0.1 1.9e-09 37.0 0.1 1.5 1 0 0 1 1 1 1 PUA domain DKCLD PF08068.7 gi|154150056|ref|YP_001403674.1| - 4.3e-06 26.5 0.2 1.2e-05 25.1 0.0 1.8 2 0 0 2 2 2 1 DKCLD (NUC011) domain TruB-C_2 PF09157.6 gi|154150056|ref|YP_001403674.1| - 0.047 13.5 0.0 0.21 11.4 0.0 2.0 2 0 0 2 2 2 0 Pseudouridine synthase II TruB, C-terminal HEM4 PF02602.10 gi|154150057|ref|YP_001403675.1| - 1e-20 74.0 0.0 1.2e-20 73.7 0.0 1.1 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD TctA PF01970.11 gi|154150058|ref|YP_001403676.1| - 7.9e-60 202.4 51.4 9.6e-60 202.1 35.6 1.1 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctA family Nop PF01798.13 gi|154150059|ref|YP_001403677.1| - 2.3e-40 137.3 0.4 3.4e-40 136.7 0.3 1.2 1 0 0 1 1 1 1 Putative snoRNA binding domain NOSIC PF08060.8 gi|154150059|ref|YP_001403677.1| - 6.7e-06 25.8 0.1 1.7e-05 24.4 0.0 1.7 2 0 0 2 2 2 1 NOSIC (NUC001) domain Fibrillarin PF01269.12 gi|154150060|ref|YP_001403678.1| - 5.5e-65 218.4 0.0 6.5e-65 218.2 0.0 1.0 1 0 0 1 1 1 1 Fibrillarin DREV PF05219.7 gi|154150060|ref|YP_001403678.1| - 0.0046 15.8 0.0 0.0055 15.6 0.0 1.1 1 0 0 1 1 1 1 DREV methyltransferase DUF2816 PF10992.3 gi|154150060|ref|YP_001403678.1| - 0.098 12.2 0.1 0.16 11.6 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2816) HTH_33 PF13592.1 gi|154150060|ref|YP_001403678.1| - 0.14 11.7 0.0 0.23 11.0 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn helix DUF1614 PF07758.6 gi|154150061|ref|YP_001403679.1| - 5.2e-40 137.0 11.7 5.2e-40 137.0 8.1 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF1614) DUF3169 PF11368.3 gi|154150061|ref|YP_001403679.1| - 0.038 13.1 0.7 0.072 12.2 0.5 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3169) Sre PF03125.13 gi|154150061|ref|YP_001403679.1| - 0.057 12.3 0.5 0.11 11.4 0.3 1.4 1 0 0 1 1 1 0 C. elegans Sre G protein-coupled chemoreceptor Thymidylat_synt PF00303.14 gi|154150064|ref|YP_001403682.1| - 1.3e-36 126.0 0.0 9e-36 123.2 0.0 1.8 1 1 0 1 1 1 1 Thymidylate synthase DUF3821 PF12863.2 gi|154150065|ref|YP_001403683.1| - 6.2e-62 208.9 7.9 6.2e-62 208.9 5.5 4.7 4 1 0 4 4 4 2 Domain of unknown function (DUF3821) PYNP_C PF07831.8 gi|154150066|ref|YP_001403684.1| - 2.2e-13 49.4 0.0 1.6e-12 46.6 0.0 2.3 2 0 0 2 2 2 1 Pyrimidine nucleoside phosphorylase C-terminal domain Glycos_transf_3 PF00591.16 gi|154150066|ref|YP_001403684.1| - 2.4e-13 50.0 3.6 1e-10 41.5 0.1 2.9 3 0 0 3 3 3 2 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.12 gi|154150066|ref|YP_001403684.1| - 8.1e-12 44.5 0.3 1.5e-11 43.7 0.2 1.5 1 0 0 1 1 1 1 Glycosyl transferase family, helical bundle domain Molydop_binding PF01568.16 gi|154150066|ref|YP_001403684.1| - 0.00031 20.5 0.0 0.00097 18.9 0.0 1.9 1 1 1 2 2 2 1 Molydopterin dinucleotide binding domain DUF2254 PF10011.4 gi|154150066|ref|YP_001403684.1| - 0.0066 14.9 0.0 0.01 14.3 0.0 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2254) HlyD_3 PF13437.1 gi|154150066|ref|YP_001403684.1| - 0.019 15.2 0.3 1.5 9.1 0.0 3.5 4 0 0 4 4 4 0 HlyD family secretion protein CarboxypepD_reg PF13620.1 gi|154150067|ref|YP_001403685.1| - 3e-33 113.7 30.8 4.1e-11 42.7 0.6 5.3 5 0 0 5 5 5 5 Carboxypeptidase regulatory-like domain DUF4480 PF13715.1 gi|154150067|ref|YP_001403685.1| - 1.3e-30 105.2 11.9 5.6e-07 29.5 0.0 5.1 2 2 3 5 5 5 5 Domain of unknown function (DUF4480) PEGA PF08308.6 gi|154150067|ref|YP_001403685.1| - 5.4e-20 70.9 11.2 0.00026 20.7 0.0 5.7 5 0 0 5 5 5 5 PEGA domain DUF2012 PF09430.5 gi|154150067|ref|YP_001403685.1| - 0.00054 19.7 1.5 0.021 14.6 0.0 2.9 3 1 0 3 3 3 1 Protein of unknown function (DUF2012) Cna_B PF05738.8 gi|154150067|ref|YP_001403685.1| - 0.002 17.8 0.0 0.002 17.8 0.0 3.7 4 0 0 4 4 4 1 Cna protein B-type domain BiPBP_C PF06832.7 gi|154150067|ref|YP_001403685.1| - 0.0027 17.6 0.0 16 5.4 0.0 3.5 2 1 1 3 3 3 0 Penicillin-Binding Protein C-terminus Family DUF2606 PF10794.4 gi|154150067|ref|YP_001403685.1| - 0.0052 16.2 0.2 6.1 6.2 0.1 4.7 2 1 2 4 4 4 1 Protein of unknown function (DUF2606) phage_tail_N PF08400.5 gi|154150067|ref|YP_001403685.1| - 0.015 15.0 13.9 0.65 9.6 0.1 4.8 4 2 1 5 5 5 0 Prophage tail fibre N-terminal YtkA PF13115.1 gi|154150067|ref|YP_001403685.1| - 0.076 13.3 0.2 2.2 8.6 0.0 2.8 3 0 0 3 3 3 0 YtkA-like MG1 PF11974.3 gi|154150067|ref|YP_001403685.1| - 0.091 13.3 15.4 3.4 8.2 0.2 4.9 1 1 4 5 5 5 0 Alpha-2-macroglobulin MG1 domain DUF824 PF05688.6 gi|154150067|ref|YP_001403685.1| - 0.88 9.2 6.8 39 3.9 0.0 4.2 4 0 0 4 4 4 0 Salmonella repeat of unknown function (DUF824) dUTPase PF00692.14 gi|154150068|ref|YP_001403686.1| - 2.1e-17 62.7 0.0 2.6e-17 62.5 0.0 1.1 1 0 0 1 1 1 1 dUTPase DCD PF06559.6 gi|154150068|ref|YP_001403686.1| - 0.011 14.2 0.1 0.61 8.4 0.0 2.4 1 1 1 2 2 2 0 2'-deoxycytidine 5'-triphosphate deaminase (DCD) DUF128 PF01995.11 gi|154150069|ref|YP_001403687.1| - 6.1e-81 270.8 0.0 7.5e-81 270.5 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF128 HTH_12 PF08461.5 gi|154150069|ref|YP_001403687.1| - 8.9e-16 57.3 0.0 1.8e-15 56.3 0.0 1.5 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain Ribosomal_S19e PF01090.14 gi|154150069|ref|YP_001403687.1| - 0.16 11.4 0.0 0.27 10.6 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein S19e Tubulin PF00091.20 gi|154150070|ref|YP_001403688.1| - 4.8e-05 23.2 0.0 0.00015 21.6 0.0 1.8 1 1 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Bac_luciferase PF00296.15 gi|154150071|ref|YP_001403689.1| - 1.4e-50 172.1 0.0 1.6e-50 172.0 0.0 1.0 1 0 0 1 1 1 1 Luciferase-like monooxygenase GFO_IDH_MocA PF01408.17 gi|154150071|ref|YP_001403689.1| - 0.032 14.7 1.0 0.53 10.8 0.0 3.1 3 1 0 3 3 3 0 Oxidoreductase family, NAD-binding Rossmann fold MTD PF01993.13 gi|154150073|ref|YP_001403691.1| - 9.1e-106 352.9 6.3 1e-105 352.7 4.4 1.0 1 0 0 1 1 1 1 methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase Peripla_BP_4 PF13407.1 gi|154150073|ref|YP_001403691.1| - 0.012 14.9 0.3 0.014 14.7 0.2 1.3 1 1 0 1 1 1 0 Periplasmic binding protein domain TFX_C PF14601.1 gi|154150074|ref|YP_001403692.1| - 1.1e-32 111.6 0.0 1.8e-32 110.9 0.0 1.3 1 0 0 1 1 1 1 DNA_binding protein, TFX, C-term Sigma70_r4 PF04545.11 gi|154150074|ref|YP_001403692.1| - 1.6e-08 33.7 0.2 2.4e-08 33.1 0.1 1.3 1 0 0 1 1 1 1 Sigma-70, region 4 GerE PF00196.14 gi|154150074|ref|YP_001403692.1| - 4.6e-07 29.0 0.3 8.2e-07 28.2 0.2 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_38 PF13936.1 gi|154150074|ref|YP_001403692.1| - 0.00048 19.6 0.1 0.0011 18.5 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4_2 PF08281.7 gi|154150074|ref|YP_001403692.1| - 0.0014 18.0 0.1 0.0044 16.4 0.0 1.8 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_23 PF13384.1 gi|154150074|ref|YP_001403692.1| - 0.0063 16.1 0.1 0.013 15.1 0.1 1.5 1 0 0 1 1 1 1 Homeodomain-like domain HTH_37 PF13744.1 gi|154150074|ref|YP_001403692.1| - 0.013 15.2 1.8 0.45 10.3 0.1 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain LXG PF04740.7 gi|154150074|ref|YP_001403692.1| - 0.019 14.7 0.1 0.025 14.3 0.0 1.2 1 0 0 1 1 1 0 LXG domain of WXG superfamily UPF0122 PF04297.9 gi|154150074|ref|YP_001403692.1| - 0.046 13.7 0.2 0.11 12.5 0.1 1.6 1 0 0 1 1 1 0 Putative helix-turn-helix protein, YlxM / p13 like MarR PF01047.17 gi|154150074|ref|YP_001403692.1| - 0.11 12.2 0.1 0.2 11.4 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_31 PF13560.1 gi|154150074|ref|YP_001403692.1| - 0.11 12.7 0.0 0.32 11.2 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_7 PF02796.10 gi|154150074|ref|YP_001403692.1| - 0.12 12.2 0.3 0.28 11.0 0.1 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase Ribosomal_L3 PF00297.17 gi|154150075|ref|YP_001403693.1| - 3.8e-72 242.8 0.3 4.3e-72 242.6 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L3 Ribosomal_L4 PF00573.17 gi|154150076|ref|YP_001403694.1| - 2.5e-40 137.9 0.4 2.9e-40 137.7 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Ribosomal_L23 PF00276.15 gi|154150077|ref|YP_001403695.1| - 1.3e-13 50.6 1.9 2e-13 50.0 1.3 1.3 1 1 0 1 1 1 1 Ribosomal protein L23 YihI PF04220.7 gi|154150077|ref|YP_001403695.1| - 0.0031 16.8 0.1 0.0034 16.7 0.0 1.1 1 0 0 1 1 1 1 Der GTPase activator (YihI) RRM_6 PF14259.1 gi|154150077|ref|YP_001403695.1| - 0.026 14.4 0.1 0.061 13.3 0.1 1.6 1 1 1 2 2 2 0 RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) DUF3782 PF12644.2 gi|154150077|ref|YP_001403695.1| - 0.062 13.1 0.3 0.079 12.7 0.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3782) TusA PF01206.12 gi|154150077|ref|YP_001403695.1| - 0.073 12.6 0.2 0.1 12.1 0.1 1.4 1 1 0 1 1 1 0 Sulfurtransferase TusA DnaJ PF00226.26 gi|154150077|ref|YP_001403695.1| - 0.085 12.6 0.5 0.36 10.5 0.4 1.9 1 1 0 1 1 1 0 DnaJ domain Ribosomal_L2_C PF03947.13 gi|154150078|ref|YP_001403696.1| - 2.4e-42 143.7 2.3 3.6e-42 143.2 1.6 1.3 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.18 gi|154150078|ref|YP_001403696.1| - 1.3e-15 57.1 0.0 3.4e-15 55.7 0.0 1.8 1 0 0 1 1 1 1 Ribosomal Proteins L2, RNA binding domain DUF3084 PF11283.3 gi|154150078|ref|YP_001403696.1| - 0.033 14.0 0.2 0.064 13.1 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3084) Ribosomal_S19 PF00203.16 gi|154150079|ref|YP_001403697.1| - 1.7e-22 78.7 0.2 2.5e-22 78.2 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein S19 Ribosomal_L22 PF00237.14 gi|154150080|ref|YP_001403698.1| - 6.1e-30 103.2 0.3 7.2e-30 103.0 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e Ribosomal_S3_C PF00189.15 gi|154150081|ref|YP_001403699.1| - 3e-17 62.6 2.2 3.9e-17 62.2 0.4 1.9 2 0 0 2 2 2 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.12 gi|154150081|ref|YP_001403699.1| - 1.8e-12 46.6 0.0 3.4e-12 45.7 0.0 1.4 1 0 0 1 1 1 1 KH domain KH_1 PF00013.24 gi|154150081|ref|YP_001403699.1| - 0.003 17.1 0.2 0.0083 15.7 0.0 1.8 2 0 0 2 2 2 1 KH domain KH_4 PF13083.1 gi|154150081|ref|YP_001403699.1| - 0.12 12.0 0.1 0.22 11.2 0.0 1.6 1 0 0 1 1 1 0 KH domain Ribosomal_L29 PF00831.18 gi|154150082|ref|YP_001403700.1| - 5.8e-14 51.5 0.1 6.4e-14 51.3 0.0 1.0 1 0 0 1 1 1 1 Ribosomal L29 protein DUF4061 PF13270.1 gi|154150082|ref|YP_001403700.1| - 0.17 11.9 0.7 1.7 8.8 0.4 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4061) DUF1192 PF06698.6 gi|154150082|ref|YP_001403700.1| - 1.6 8.5 3.8 12 5.8 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1192) UPF0086 PF01868.11 gi|154150083|ref|YP_001403701.1| - 1.5e-27 95.0 0.0 1.6e-27 94.9 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function UPF0086 Ribosomal_S17 PF00366.15 gi|154150084|ref|YP_001403702.1| - 1.5e-27 95.4 2.3 1.8e-27 95.1 1.6 1.1 1 0 0 1 1 1 1 Ribosomal protein S17 Ribosomal_L14 PF00238.14 gi|154150085|ref|YP_001403703.1| - 7.7e-37 125.7 0.4 8.7e-37 125.5 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e NHL PF01436.16 gi|154150085|ref|YP_001403703.1| - 0.016 15.1 0.0 0.033 14.1 0.0 1.6 1 0 0 1 1 1 0 NHL repeat UnbV_ASPIC PF07593.7 gi|154150085|ref|YP_001403703.1| - 0.019 14.6 0.1 0.034 13.8 0.1 1.4 1 0 0 1 1 1 0 ASPIC and UnbV KOW PF00467.24 gi|154150086|ref|YP_001403704.1| - 4.6e-06 26.1 7.0 1.1e-05 24.9 4.9 1.7 1 0 0 1 1 1 1 KOW motif Ribosomal_S4e PF00900.15 gi|154150087|ref|YP_001403705.1| - 7.2e-28 96.0 0.4 1.4e-27 95.1 0.3 1.6 1 0 0 1 1 1 1 Ribosomal family S4e RS4NT PF08071.7 gi|154150087|ref|YP_001403705.1| - 5.6e-13 48.5 0.7 1.2e-12 47.4 0.5 1.6 1 0 0 1 1 1 1 RS4NT (NUC023) domain S4 PF01479.20 gi|154150087|ref|YP_001403705.1| - 1.4e-06 27.6 0.1 2.9e-06 26.5 0.1 1.6 1 0 0 1 1 1 1 S4 domain KOW PF00467.24 gi|154150087|ref|YP_001403705.1| - 0.0002 20.9 0.1 0.0002 20.9 0.1 2.3 2 0 0 2 2 2 1 KOW motif Ribosomal_L5_C PF00673.16 gi|154150088|ref|YP_001403706.1| - 1.7e-28 98.1 0.1 2.9e-28 97.4 0.1 1.3 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.14 gi|154150088|ref|YP_001403706.1| - 4.3e-14 52.0 0.2 7e-14 51.3 0.2 1.4 1 0 0 1 1 1 1 Ribosomal protein L5 Ribosomal_S3_C PF00189.15 gi|154150088|ref|YP_001403706.1| - 0.071 13.3 0.1 0.16 12.2 0.1 1.6 1 0 0 1 1 1 0 Ribosomal protein S3, C-terminal domain DUF2361 PF10153.4 gi|154150088|ref|YP_001403706.1| - 0.38 10.9 4.9 0.16 12.1 1.8 1.5 2 0 0 2 2 2 0 Uncharacterised conserved protein (DUF2361) Ribosomal_S14 PF00253.16 gi|154150089|ref|YP_001403707.1| - 9.1e-19 66.5 6.0 1e-18 66.4 4.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e DUF2318 PF10080.4 gi|154150089|ref|YP_001403707.1| - 0.0094 15.7 0.5 0.01 15.6 0.3 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2318) DUF1451 PF07295.6 gi|154150089|ref|YP_001403707.1| - 0.018 14.8 0.4 0.019 14.7 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1451) DUF2616 PF11077.3 gi|154150089|ref|YP_001403707.1| - 0.039 13.4 0.3 0.04 13.4 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2616) DUF1244 PF06844.6 gi|154150089|ref|YP_001403707.1| - 0.045 13.5 0.7 0.16 11.8 0.2 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1244) FYVE PF01363.16 gi|154150089|ref|YP_001403707.1| - 0.054 13.3 1.9 0.066 13.1 1.3 1.2 1 0 0 1 1 1 0 FYVE zinc finger zf-C3HC4 PF00097.20 gi|154150089|ref|YP_001403707.1| - 0.098 12.3 2.2 0.59 9.8 0.2 2.0 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DZR PF12773.2 gi|154150089|ref|YP_001403707.1| - 0.1 12.4 1.6 0.14 11.9 1.1 1.3 1 1 0 1 1 1 0 Double zinc ribbon zf-RING_2 PF13639.1 gi|154150089|ref|YP_001403707.1| - 0.4 10.5 4.1 1.6 8.6 2.9 1.8 1 1 0 1 1 1 0 Ring finger domain zf-C3HC4_3 PF13920.1 gi|154150089|ref|YP_001403707.1| - 0.42 10.3 3.3 1.5 8.5 2.3 1.8 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.1 gi|154150089|ref|YP_001403707.1| - 0.55 10.3 3.3 2.4 8.2 2.6 1.8 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Cript PF10235.4 gi|154150089|ref|YP_001403707.1| - 1.5 9.1 4.3 2.7 8.4 3.0 1.5 1 1 0 1 1 1 0 Microtubule-associated protein CRIPT Prim_Zn_Ribbon PF08273.7 gi|154150089|ref|YP_001403707.1| - 5.3 7.1 6.2 41 4.3 4.2 2.1 1 1 0 1 1 1 0 Zinc-binding domain of primase-helicase Ribosomal_S8 PF00410.14 gi|154150090|ref|YP_001403708.1| - 2.1e-26 92.2 0.0 2.7e-26 91.8 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S8 Ribosomal_L6 PF00347.18 gi|154150091|ref|YP_001403709.1| - 9.5e-26 90.1 0.4 3.1e-13 50.0 0.0 2.1 2 0 0 2 2 2 2 Ribosomal protein L6 Ribosomal_L32e PF01655.13 gi|154150092|ref|YP_001403710.1| - 4.1e-35 120.1 0.1 4.1e-35 120.1 0.1 1.7 2 0 0 2 2 2 1 Ribosomal protein L32 HC2 PF07382.6 gi|154150092|ref|YP_001403710.1| - 6.7 6.5 62.8 11 5.8 43.5 1.3 1 0 0 1 1 1 0 Histone H1-like nucleoprotein HC2 Herpes_env PF01673.13 gi|154150092|ref|YP_001403710.1| - 8.4 4.8 7.2 10 4.5 5.0 1.2 1 0 0 1 1 1 0 Herpesvirus putative major envelope glycoprotein Ribosomal_L19e PF01280.15 gi|154150093|ref|YP_001403711.1| - 1.1e-58 197.2 8.1 1.2e-58 197.0 5.6 1.0 1 0 0 1 1 1 1 Ribosomal protein L19e Ribosomal_L18p PF00861.17 gi|154150094|ref|YP_001403712.1| - 6.1e-38 129.6 1.0 8.7e-38 129.1 0.7 1.2 1 0 0 1 1 1 1 Ribosomal L18p/L5e family DUF3544 PF12064.3 gi|154150094|ref|YP_001403712.1| - 0.14 11.9 0.0 0.2 11.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3544) Ribosomal_S5 PF00333.15 gi|154150095|ref|YP_001403713.1| - 6.3e-27 93.1 2.7 1.4e-26 92.0 1.9 1.6 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.10 gi|154150095|ref|YP_001403713.1| - 2.7e-24 84.2 0.2 5.1e-24 83.3 0.2 1.4 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain Ribosomal_L30 PF00327.15 gi|154150096|ref|YP_001403714.1| - 1.9e-21 75.3 0.6 3.9e-21 74.3 0.4 1.6 1 0 0 1 1 1 1 Ribosomal protein L30p/L7e Ribosomal_L18e PF00828.14 gi|154150097|ref|YP_001403715.1| - 1.4e-24 86.9 1.3 1.6e-24 86.6 0.9 1.1 1 0 0 1 1 1 1 Ribosomal protein L18e/L15 DHHA1 PF02272.14 gi|154150097|ref|YP_001403715.1| - 0.038 13.7 0.7 0.081 12.6 0.5 1.6 1 0 0 1 1 1 0 DHHA1 domain SecY PF00344.15 gi|154150098|ref|YP_001403716.1| - 4.9e-93 311.7 25.5 6.1e-93 311.4 17.6 1.1 1 0 0 1 1 1 1 SecY translocase Plug_translocon PF10559.4 gi|154150098|ref|YP_001403716.1| - 3.7e-11 42.3 0.5 1.4e-10 40.4 0.4 2.1 1 0 0 1 1 1 1 Plug domain of Sec61p Tetraspannin PF00335.15 gi|154150098|ref|YP_001403716.1| - 0.015 14.5 1.2 0.015 14.5 0.9 3.8 4 0 0 4 4 4 0 Tetraspanin family AAA_18 PF13238.1 gi|154150099|ref|YP_001403717.1| - 1.7e-17 63.9 0.0 2.3e-17 63.5 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|154150099|ref|YP_001403717.1| - 6.1e-08 33.5 0.0 1e-07 32.8 0.0 1.3 1 1 0 1 1 1 1 AAA domain NTPase_1 PF03266.10 gi|154150099|ref|YP_001403717.1| - 7.8e-07 28.9 0.0 1.2e-06 28.3 0.0 1.4 1 0 0 1 1 1 1 NTPase AAA_33 PF13671.1 gi|154150099|ref|YP_001403717.1| - 5.7e-06 26.2 0.0 8.5e-06 25.6 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_28 PF13521.1 gi|154150099|ref|YP_001403717.1| - 8.8e-05 22.5 0.1 0.00014 21.8 0.1 1.6 1 1 0 1 1 1 1 AAA domain Zeta_toxin PF06414.7 gi|154150099|ref|YP_001403717.1| - 0.00011 21.4 0.1 0.00019 20.5 0.0 1.3 1 0 0 1 1 1 1 Zeta toxin Thymidylate_kin PF02223.12 gi|154150099|ref|YP_001403717.1| - 0.00014 21.2 0.0 0.18 11.1 0.0 2.3 2 0 0 2 2 2 2 Thymidylate kinase AAA_16 PF13191.1 gi|154150099|ref|YP_001403717.1| - 0.0002 21.3 0.0 0.00025 21.0 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_14 PF13173.1 gi|154150099|ref|YP_001403717.1| - 0.00052 19.9 0.0 0.00092 19.1 0.0 1.6 1 1 0 1 1 1 1 AAA domain DUF2075 PF09848.4 gi|154150099|ref|YP_001403717.1| - 0.00099 18.1 0.0 0.001 18.1 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_22 PF13401.1 gi|154150099|ref|YP_001403717.1| - 0.0012 19.0 0.1 0.0035 17.4 0.1 2.0 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.1 gi|154150099|ref|YP_001403717.1| - 0.0015 18.2 0.5 0.0039 16.9 0.3 1.6 1 1 0 1 1 1 1 Part of AAA domain Viral_helicase1 PF01443.13 gi|154150099|ref|YP_001403717.1| - 0.0021 17.6 0.0 0.0034 16.9 0.0 1.5 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase ArgK PF03308.11 gi|154150099|ref|YP_001403717.1| - 0.0023 16.7 0.1 0.0053 15.5 0.1 1.5 1 0 0 1 1 1 1 ArgK protein MobB PF03205.9 gi|154150099|ref|YP_001403717.1| - 0.0036 17.0 0.5 0.01 15.5 0.1 1.9 2 1 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B MMR_HSR1 PF01926.18 gi|154150099|ref|YP_001403717.1| - 0.0037 17.1 0.2 0.0057 16.6 0.1 1.7 1 1 0 1 1 1 1 50S ribosome-binding GTPase Arch_ATPase PF01637.13 gi|154150099|ref|YP_001403717.1| - 0.0042 16.8 0.0 0.0065 16.2 0.0 1.3 1 1 0 1 1 1 1 Archaeal ATPase KTI12 PF08433.5 gi|154150099|ref|YP_001403717.1| - 0.0045 16.2 0.0 0.0072 15.5 0.0 1.4 1 0 0 1 1 1 1 Chromatin associated protein KTI12 AAA_5 PF07728.9 gi|154150099|ref|YP_001403717.1| - 0.0053 16.4 0.0 0.04 13.6 0.0 2.1 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA PF00004.24 gi|154150099|ref|YP_001403717.1| - 0.0059 16.8 0.2 0.01 16.0 0.1 1.6 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) cobW PF02492.14 gi|154150099|ref|YP_001403717.1| - 0.007 15.8 0.0 0.017 14.5 0.0 1.7 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain SRP54 PF00448.17 gi|154150099|ref|YP_001403717.1| - 0.008 15.6 0.1 0.014 14.7 0.0 1.4 1 1 0 1 1 1 1 SRP54-type protein, GTPase domain NACHT PF05729.7 gi|154150099|ref|YP_001403717.1| - 0.013 15.2 0.0 0.029 14.0 0.0 1.7 1 1 0 1 1 1 0 NACHT domain AAA_11 PF13086.1 gi|154150099|ref|YP_001403717.1| - 0.022 14.3 0.1 0.029 13.9 0.0 1.4 1 1 0 1 1 1 0 AAA domain DAP3 PF10236.4 gi|154150099|ref|YP_001403717.1| - 0.029 13.2 0.0 0.041 12.8 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 Miro PF08477.8 gi|154150099|ref|YP_001403717.1| - 0.029 14.8 0.0 0.063 13.7 0.0 1.6 2 0 0 2 2 1 0 Miro-like protein TIP49 PF06068.8 gi|154150099|ref|YP_001403717.1| - 0.036 12.7 0.0 0.065 11.9 0.0 1.4 1 0 0 1 1 1 0 TIP49 C-terminus ATP_bind_1 PF03029.12 gi|154150099|ref|YP_001403717.1| - 0.046 13.2 0.1 0.13 11.8 0.0 1.8 1 1 1 2 2 2 0 Conserved hypothetical ATP binding protein DUF258 PF03193.11 gi|154150099|ref|YP_001403717.1| - 0.064 12.4 0.0 0.086 12.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF258 AAA_30 PF13604.1 gi|154150099|ref|YP_001403717.1| - 0.085 12.4 0.3 0.22 11.0 0.2 1.7 1 1 0 1 1 1 0 AAA domain AAA_3 PF07726.6 gi|154150099|ref|YP_001403717.1| - 0.11 12.0 0.0 0.19 11.3 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) APS_kinase PF01583.15 gi|154150099|ref|YP_001403717.1| - 0.12 12.0 0.0 0.22 11.1 0.0 1.6 1 1 0 1 1 1 0 Adenylylsulphate kinase ABC_tran PF00005.22 gi|154150099|ref|YP_001403717.1| - 0.12 12.6 1.5 0.22 11.8 1.0 1.7 1 1 0 1 1 1 0 ABC transporter DnaB_C PF03796.10 gi|154150099|ref|YP_001403717.1| - 0.14 11.0 0.6 6.6 5.5 0.1 2.2 2 1 0 2 2 2 0 DnaB-like helicase C terminal domain AAA_29 PF13555.1 gi|154150099|ref|YP_001403717.1| - 0.14 11.6 0.2 0.3 10.6 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_24 PF13479.1 gi|154150099|ref|YP_001403717.1| - 0.15 11.5 0.5 0.32 10.5 0.4 1.5 1 0 0 1 1 1 0 AAA domain T2SE PF00437.15 gi|154150099|ref|YP_001403717.1| - 0.19 10.5 0.2 0.19 10.5 0.1 1.8 2 1 1 3 3 3 0 Type II/IV secretion system protein DUF106 PF01956.11 gi|154150100|ref|YP_001403718.1| - 2.3e-43 147.6 5.1 2.3e-43 147.6 3.5 1.8 2 0 0 2 2 2 1 Integral membrane protein DUF106 60KD_IMP PF02096.15 gi|154150100|ref|YP_001403718.1| - 0.001 18.7 13.1 0.001 18.7 7.2 2.1 1 1 1 2 2 2 1 60Kd inner membrane protein Peptidase_S49_N PF08496.5 gi|154150100|ref|YP_001403718.1| - 0.21 11.3 1.6 0.21 11.3 0.1 1.7 2 0 0 2 2 2 0 Peptidase family S49 N-terminal DUF3671 PF12420.3 gi|154150100|ref|YP_001403718.1| - 0.33 10.9 8.5 0.5 10.3 1.1 2.4 1 1 1 2 2 2 0 Protein of unknown function DUF4446 PF14584.1 gi|154150100|ref|YP_001403718.1| - 0.69 9.7 3.6 0.17 11.6 0.2 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF4446) PIG-P PF08510.7 gi|154150100|ref|YP_001403718.1| - 1.4 8.5 16.0 40 3.8 11.2 2.8 1 1 0 1 1 1 0 PIG-P zf-DHHC PF01529.15 gi|154150100|ref|YP_001403718.1| - 4.6 6.6 8.0 0.49 9.7 2.0 2.0 2 1 0 2 2 2 0 DHHC palmitoyltransferase Cytidylate_kin2 PF13189.1 gi|154150101|ref|YP_001403719.1| - 1.8e-20 73.6 0.7 1.5e-19 70.5 0.5 1.9 1 1 0 1 1 1 1 Cytidylate kinase-like family AAA_17 PF13207.1 gi|154150101|ref|YP_001403719.1| - 8e-13 49.2 0.1 1.2e-12 48.6 0.1 1.5 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|154150101|ref|YP_001403719.1| - 5.6e-12 46.0 0.0 7.3e-12 45.7 0.0 1.2 1 0 0 1 1 1 1 AAA domain Cytidylate_kin PF02224.13 gi|154150101|ref|YP_001403719.1| - 2.2e-05 23.9 0.0 2.9e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 Cytidylate kinase AAA_28 PF13521.1 gi|154150101|ref|YP_001403719.1| - 0.00043 20.2 0.1 0.0011 18.9 0.0 1.6 2 0 0 2 2 2 1 AAA domain ADK PF00406.17 gi|154150101|ref|YP_001403719.1| - 0.00094 19.0 0.0 0.0019 18.0 0.0 1.7 1 1 0 1 1 1 1 Adenylate kinase AAA_33 PF13671.1 gi|154150101|ref|YP_001403719.1| - 0.019 14.8 0.0 0.032 14.1 0.0 1.4 1 1 0 1 1 1 0 AAA domain Acetyltransf_7 PF13508.1 gi|154150102|ref|YP_001403720.1| - 2.7e-11 43.4 0.0 3.5e-11 43.1 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|154150102|ref|YP_001403720.1| - 7.8e-10 38.6 0.0 1.1e-09 38.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.1 gi|154150102|ref|YP_001403720.1| - 3e-07 30.5 0.0 3.5e-07 30.3 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|154150102|ref|YP_001403720.1| - 0.00025 20.9 0.0 0.00046 20.0 0.0 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|154150102|ref|YP_001403720.1| - 0.088 12.5 0.0 0.16 11.7 0.0 1.4 1 1 0 1 1 1 0 FR47-like protein DUF2156 PF09924.4 gi|154150103|ref|YP_001403721.1| - 3.4e-51 173.8 0.0 4.3e-51 173.5 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2156) MarC PF01914.12 gi|154150104|ref|YP_001403722.1| - 5.2e-34 117.1 23.0 6.3e-34 116.8 15.9 1.1 1 0 0 1 1 1 1 MarC family integral membrane protein Rubredoxin PF00301.15 gi|154150105|ref|YP_001403723.1| - 4.8e-40 135.2 9.8 8.8e-20 70.3 0.6 2.5 2 0 0 2 2 2 2 Rubredoxin TF_Zn_Ribbon PF08271.7 gi|154150105|ref|YP_001403723.1| - 0.00063 19.0 9.8 0.64 9.3 0.0 4.2 4 0 0 4 4 4 2 TFIIB zinc-binding Elf1 PF05129.8 gi|154150105|ref|YP_001403723.1| - 0.00095 18.8 3.0 0.92 9.2 0.0 3.7 2 1 1 3 3 3 1 Transcription elongation factor Elf1 like zf-Sec23_Sec24 PF04810.10 gi|154150105|ref|YP_001403723.1| - 0.0033 16.9 1.8 30 4.2 0.0 4.0 4 0 0 4 4 4 0 Sec23/Sec24 zinc finger zf-H2C2_2 PF13465.1 gi|154150105|ref|YP_001403723.1| - 0.0035 17.5 12.8 5.1 7.5 0.3 4.3 4 0 0 4 4 4 1 Zinc-finger double domain Nudix_N_2 PF14803.1 gi|154150105|ref|YP_001403723.1| - 0.0058 16.2 7.6 4.2 7.1 0.1 3.9 4 0 0 4 4 4 1 Nudix N-terminal DUF2296 PF10058.4 gi|154150105|ref|YP_001403723.1| - 0.031 14.0 6.8 8.1 6.2 0.1 4.1 4 0 0 4 4 4 0 Predicted integral membrane metal-binding protein (DUF2296) zf-Di19 PF05605.7 gi|154150105|ref|YP_001403723.1| - 0.037 14.1 1.6 15 5.7 0.1 3.1 3 0 0 3 3 3 0 Drought induced 19 protein (Di19), zinc-binding Zn_Tnp_IS1595 PF12760.2 gi|154150105|ref|YP_001403723.1| - 0.045 13.5 8.9 0.14 11.9 0.5 3.2 3 0 0 3 3 3 0 Transposase zinc-ribbon domain zf-H2C2_5 PF13909.1 gi|154150105|ref|YP_001403723.1| - 0.051 13.8 7.3 16 5.9 0.1 4.1 4 0 0 4 4 4 0 C2H2-type zinc-finger domain zf-nanos PF05741.8 gi|154150105|ref|YP_001403723.1| - 0.06 13.3 6.7 12 5.9 0.0 4.0 4 0 0 4 4 4 0 Nanos RNA binding domain ProRS-C_1 PF09180.6 gi|154150105|ref|YP_001403723.1| - 0.061 13.2 0.2 15 5.6 0.0 2.6 2 0 0 2 2 2 0 Prolyl-tRNA synthetase, C-terminal zf-C2H2_4 PF13894.1 gi|154150105|ref|YP_001403723.1| - 0.085 13.2 9.7 23 5.6 0.1 4.2 4 0 0 4 4 4 0 C2H2-type zinc finger zf-Mss51 PF13824.1 gi|154150105|ref|YP_001403723.1| - 0.087 12.6 4.4 5.5 6.9 0.1 3.6 3 1 1 4 4 4 0 Zinc-finger of mitochondrial splicing suppressor 51 IBR PF01485.16 gi|154150105|ref|YP_001403723.1| - 0.1 12.4 0.7 8.9 6.2 0.0 2.3 2 0 0 2 2 2 0 IBR domain Zn-ribbon_8 PF09723.5 gi|154150105|ref|YP_001403723.1| - 0.1 12.5 9.5 19 5.3 0.1 4.2 4 0 0 4 4 4 0 Zinc ribbon domain Cys_rich_KTR PF14205.1 gi|154150105|ref|YP_001403723.1| - 0.17 11.3 2.4 4.6 6.7 0.0 2.5 3 0 0 3 3 2 0 Cysteine-rich KTR UPF0547 PF10571.4 gi|154150105|ref|YP_001403723.1| - 0.19 11.4 17.8 1.8 8.3 0.2 4.2 4 0 0 4 4 4 0 Uncharacterised protein family UPF0547 Tnp_zf-ribbon_2 PF13842.1 gi|154150105|ref|YP_001403723.1| - 0.22 11.9 4.2 11 6.5 0.1 3.2 3 0 0 3 3 3 0 DDE_Tnp_1-like zinc-ribbon zf-HIT PF04438.11 gi|154150105|ref|YP_001403723.1| - 0.31 10.7 15.1 15 5.2 0.1 4.2 4 0 0 4 4 4 0 HIT zinc finger C1_3 PF07649.7 gi|154150105|ref|YP_001403723.1| - 0.33 11.0 13.7 1.2 9.2 0.2 4.1 4 0 0 4 4 4 0 C1-like domain DZR PF12773.2 gi|154150105|ref|YP_001403723.1| - 0.42 10.4 5.5 90 3.0 4.0 3.4 1 1 1 2 2 2 0 Double zinc ribbon zf-C2H2_3 PF13878.1 gi|154150105|ref|YP_001403723.1| - 0.68 9.5 4.2 17 5.0 0.1 3.0 3 0 0 3 3 3 0 zinc-finger of acetyl-transferase ESCO OrfB_Zn_ribbon PF07282.6 gi|154150105|ref|YP_001403723.1| - 1.1 8.9 6.1 4.8 6.9 0.4 3.5 2 1 3 5 5 5 0 Putative transposase DNA-binding domain Auto_anti-p27 PF06677.7 gi|154150105|ref|YP_001403723.1| - 1.3 8.8 4.2 66 3.3 0.0 3.7 4 0 0 4 4 4 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) RNA_POL_M_15KD PF02150.11 gi|154150105|ref|YP_001403723.1| - 1.5 8.5 9.4 2.4 7.8 0.2 3.4 3 0 0 3 3 3 0 RNA polymerases M/15 Kd subunit Lar_restr_allev PF14354.1 gi|154150105|ref|YP_001403723.1| - 1.9 8.8 4.5 8 6.8 0.4 2.8 3 0 0 3 3 3 0 Restriction alleviation protein Lar zf-C2H2 PF00096.21 gi|154150105|ref|YP_001403723.1| - 2.8 8.4 16.2 21 5.6 0.2 4.2 4 0 0 4 4 4 0 Zinc finger, C2H2 type Desulfoferrod_N PF06397.7 gi|154150105|ref|YP_001403723.1| - 3 7.2 15.1 2.7 7.4 0.4 4.1 4 0 0 4 4 4 0 Desulfoferrodoxin, N-terminal domain DUF2443 PF10398.4 gi|154150106|ref|YP_001403724.1| - 0.11 12.3 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2443) TPR_11 PF13414.1 gi|154150107|ref|YP_001403725.1| - 4.8e-53 176.7 26.2 2.5e-15 55.8 0.1 3.8 1 1 4 5 5 5 5 TPR repeat TPR_1 PF00515.23 gi|154150107|ref|YP_001403725.1| - 6e-40 133.2 7.1 3e-09 36.0 0.0 6.1 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_16 PF13432.1 gi|154150107|ref|YP_001403725.1| - 2.7e-36 123.4 21.4 5.7e-10 39.5 0.1 3.9 1 1 4 5 5 5 5 Tetratricopeptide repeat TPR_2 PF07719.12 gi|154150107|ref|YP_001403725.1| - 9.2e-36 118.8 15.6 1.8e-08 33.6 0.0 6.1 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_12 PF13424.1 gi|154150107|ref|YP_001403725.1| - 9.4e-36 121.6 22.4 2.2e-12 46.7 0.4 4.7 1 1 4 5 5 5 5 Tetratricopeptide repeat TPR_8 PF13181.1 gi|154150107|ref|YP_001403725.1| - 3.9e-27 91.9 2.6 5.1e-05 22.7 0.0 6.1 5 1 1 6 6 6 5 Tetratricopeptide repeat TPR_17 PF13431.1 gi|154150107|ref|YP_001403725.1| - 6.3e-27 91.5 5.9 8e-05 22.5 0.0 5.6 6 0 0 6 6 6 5 Tetratricopeptide repeat TPR_14 PF13428.1 gi|154150107|ref|YP_001403725.1| - 3.2e-24 83.2 13.8 6e-05 23.3 0.1 6.0 2 1 4 6 6 6 5 Tetratricopeptide repeat TPR_19 PF14559.1 gi|154150107|ref|YP_001403725.1| - 2.2e-22 79.1 3.0 8.3e-08 32.4 0.1 3.3 3 1 0 3 3 3 3 Tetratricopeptide repeat TPR_9 PF13371.1 gi|154150107|ref|YP_001403725.1| - 5.2e-18 64.6 11.5 1.8e-08 34.0 0.2 4.1 2 1 2 4 4 4 3 Tetratricopeptide repeat TPR_7 PF13176.1 gi|154150107|ref|YP_001403725.1| - 1.4e-16 58.8 11.6 0.00084 18.9 0.0 6.0 6 0 0 6 6 6 4 Tetratricopeptide repeat Apc3 PF12895.2 gi|154150107|ref|YP_001403725.1| - 3.6e-13 49.4 13.9 6.3e-07 29.4 1.5 3.1 1 1 3 4 4 4 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.1 gi|154150107|ref|YP_001403725.1| - 2.1e-12 46.6 9.0 0.015 15.7 0.0 6.1 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_10 PF13374.1 gi|154150107|ref|YP_001403725.1| - 2.1e-10 40.1 23.8 0.05 13.5 0.4 6.1 6 0 0 6 6 6 4 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|154150107|ref|YP_001403725.1| - 7.3e-10 38.5 1.8 0.029 14.2 0.1 4.4 3 1 1 4 4 4 2 Fis1 C-terminal tetratricopeptide repeat DUF3856 PF12968.2 gi|154150107|ref|YP_001403725.1| - 1e-09 38.3 4.9 0.12 12.1 0.0 5.8 1 1 4 5 5 5 3 Domain of Unknown Function (DUF3856) TPR_4 PF07721.9 gi|154150107|ref|YP_001403725.1| - 2.7e-09 36.5 21.3 0.0061 16.8 0.1 5.9 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_15 PF13429.1 gi|154150107|ref|YP_001403725.1| - 3.9e-09 35.9 4.8 6.3e-06 25.4 0.6 3.5 1 1 1 2 2 2 2 Tetratricopeptide repeat BTAD PF03704.12 gi|154150107|ref|YP_001403725.1| - 4.7e-09 36.7 10.7 0.00048 20.4 2.1 3.2 1 1 0 2 2 2 2 Bacterial transcriptional activator domain NARP1 PF12569.3 gi|154150107|ref|YP_001403725.1| - 5e-08 32.1 0.5 0.034 12.8 0.0 3.6 1 1 0 3 3 3 2 NMDA receptor-regulated protein 1 TPR_5 PF12688.2 gi|154150107|ref|YP_001403725.1| - 7.8e-07 29.1 4.8 0.0039 17.2 0.0 4.1 1 1 3 4 4 4 2 Tetratrico peptide repeat TPR_21 PF09976.4 gi|154150107|ref|YP_001403725.1| - 0.0013 18.6 2.4 0.025 14.5 0.3 2.5 2 1 0 2 2 2 1 Tetratricopeptide repeat PvlArgDC PF01862.11 gi|154150107|ref|YP_001403725.1| - 0.017 14.7 1.2 5.2 6.6 0.0 3.5 5 0 0 5 5 5 0 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) RPN7 PF10602.4 gi|154150107|ref|YP_001403725.1| - 0.025 13.9 4.8 7 5.9 0.0 4.0 2 2 1 3 3 3 0 26S proteasome subunit RPN7 TPR_20 PF14561.1 gi|154150107|ref|YP_001403725.1| - 0.03 14.4 1.5 7.9 6.6 0.0 3.4 1 1 1 3 3 3 0 Tetratricopeptide repeat DUF3775 PF12616.3 gi|154150107|ref|YP_001403725.1| - 0.089 12.5 0.6 27 4.6 0.0 3.8 3 1 1 4 4 4 0 Protein of unknown function (DUF3775) SHNi-TPR PF10516.4 gi|154150107|ref|YP_001403725.1| - 0.11 11.7 1.5 2.8 7.2 0.0 3.5 5 0 0 5 5 4 0 SHNi-TPR MIT PF04212.13 gi|154150107|ref|YP_001403725.1| - 0.16 11.9 11.8 5 7.0 0.5 4.6 5 1 1 6 6 4 0 MIT (microtubule interacting and transport) domain Alkyl_sulf_dimr PF14863.1 gi|154150107|ref|YP_001403725.1| - 0.16 12.1 0.6 6.1 7.0 0.1 2.7 2 1 0 2 2 2 0 Alkyl sulfatase dimerisation HEAT_EZ PF13513.1 gi|154150107|ref|YP_001403725.1| - 0.81 10.2 2.9 5.4 7.6 0.0 3.4 3 2 1 4 4 4 0 HEAT-like repeat Lipocalin_4 PF13648.1 gi|154150108|ref|YP_001403726.1| - 0.0029 18.1 0.4 0.0033 17.9 0.3 1.1 1 0 0 1 1 1 1 Lipocalin-like domain MtrH PF02007.13 gi|154150109|ref|YP_001403727.1| - 5.4e-97 324.3 0.0 9.6e-97 323.5 0.0 1.4 1 1 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase MtrH subunit MtrA PF04208.9 gi|154150110|ref|YP_001403728.1| - 3.5e-72 241.5 0.6 4.8e-72 241.0 0.4 1.2 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit A MtrG PF04210.8 gi|154150110|ref|YP_001403728.1| - 4.1e-23 80.8 3.2 6.7e-23 80.1 0.3 2.1 2 0 0 2 2 2 1 Tetrahydromethanopterin S-methyltransferase, subunit G Thioredoxin_4 PF13462.1 gi|154150110|ref|YP_001403728.1| - 0.086 12.8 0.1 0.29 11.1 0.0 2.0 1 1 0 1 1 1 0 Thioredoxin MtrF PF09472.5 gi|154150111|ref|YP_001403729.1| - 2.2e-18 65.2 0.9 2.5e-18 65.0 0.6 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) DUF2453 PF10507.4 gi|154150111|ref|YP_001403729.1| - 0.047 13.5 0.1 0.05 13.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2453) MtrA PF04208.9 gi|154150112|ref|YP_001403730.1| - 1.6e-72 242.6 0.6 2.2e-72 242.1 0.4 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit A MtrF PF09472.5 gi|154150112|ref|YP_001403730.1| - 0.0022 17.1 4.5 0.011 14.9 3.1 2.1 1 1 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF) Thioredoxin_4 PF13462.1 gi|154150112|ref|YP_001403730.1| - 0.11 12.4 0.0 0.45 10.5 0.0 1.9 1 1 0 1 1 1 0 Thioredoxin MtrB PF05440.7 gi|154150113|ref|YP_001403731.1| - 8.2e-16 57.8 0.1 1.1e-15 57.4 0.1 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase subunit B LAT PF15234.1 gi|154150113|ref|YP_001403731.1| - 0.09 12.2 0.0 0.1 12.0 0.0 1.1 1 0 0 1 1 1 0 Linker for activation of T-cells MtrC PF04211.8 gi|154150114|ref|YP_001403732.1| - 3.2e-63 213.2 26.1 1.5e-35 122.5 14.5 2.0 1 1 1 2 2 2 2 Tetrahydromethanopterin S-methyltransferase, subunit C Vpu PF00558.14 gi|154150114|ref|YP_001403732.1| - 0.058 12.9 3.6 0.88 9.1 0.1 2.7 2 0 0 2 2 2 0 Vpu protein HTH_17 PF12728.2 gi|154150114|ref|YP_001403732.1| - 0.11 12.8 0.0 0.18 12.0 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Corona_M PF01635.13 gi|154150114|ref|YP_001403732.1| - 1.4 7.8 5.9 0.37 9.7 1.8 1.7 2 0 0 2 2 2 0 Coronavirus M matrix/glycoprotein MtrD PF04207.7 gi|154150115|ref|YP_001403733.1| - 1.1e-71 240.7 26.5 1.1e-71 240.7 18.4 1.4 1 1 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit D MtrE PF04206.7 gi|154150116|ref|YP_001403734.1| - 5.2e-109 363.4 11.6 6e-109 363.2 8.0 1.0 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase, subunit E HD PF01966.17 gi|154150118|ref|YP_001403736.1| - 2.4e-11 43.7 0.3 5.1e-11 42.6 0.2 1.6 1 0 0 1 1 1 1 HD domain DUF2362 PF10154.4 gi|154150118|ref|YP_001403736.1| - 0.027 13.1 0.0 0.045 12.4 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2362) KIX PF02172.11 gi|154150119|ref|YP_001403737.1| - 0.098 12.7 0.1 0.18 11.8 0.1 1.6 1 0 0 1 1 1 0 KIX domain Glyoxalase_2 PF12681.2 gi|154150121|ref|YP_001403739.1| - 2.8e-12 47.1 0.0 3.6e-12 46.8 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase PF00903.20 gi|154150121|ref|YP_001403739.1| - 3.5e-06 27.0 0.0 6.5e-06 26.1 0.0 1.5 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABM PF03992.11 gi|154150122|ref|YP_001403740.1| - 4.8e-07 29.7 0.0 7.3e-07 29.1 0.0 1.3 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase DUF3054 PF11255.3 gi|154150122|ref|YP_001403740.1| - 0.11 12.3 2.8 0.16 11.7 1.9 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3054) Radical_SAM PF04055.16 gi|154150123|ref|YP_001403741.1| - 8.5e-13 48.8 0.3 1.3e-12 48.1 0.0 1.5 2 0 0 2 2 2 1 Radical SAM superfamily SPASM PF13186.1 gi|154150123|ref|YP_001403741.1| - 1.8e-07 31.3 0.2 4.4e-07 30.1 0.2 1.7 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_14 PF13394.1 gi|154150123|ref|YP_001403741.1| - 5e-06 26.5 0.0 1e-05 25.5 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|154150123|ref|YP_001403741.1| - 0.00016 21.8 0.0 0.00028 21.0 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain DUF169 PF02596.10 gi|154150124|ref|YP_001403742.1| - 5.5e-69 231.8 0.0 6.2e-69 231.6 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 MCR_alpha_N PF02745.10 gi|154150125|ref|YP_001403743.1| - 1e-132 441.2 0.1 1.4e-132 440.8 0.1 1.1 1 0 0 1 1 1 1 Methyl-coenzyme M reductase alpha subunit, N-terminal domain MCR_alpha PF02249.12 gi|154150125|ref|YP_001403743.1| - 2.6e-64 214.9 3.3 5.6e-64 213.8 2.3 1.6 1 0 0 1 1 1 1 Methyl-coenzyme M reductase alpha subunit, C-terminal domain MCR_gamma PF02240.11 gi|154150126|ref|YP_001403744.1| - 6.7e-115 382.4 0.0 7.6e-115 382.2 0.0 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase gamma subunit MCR_C PF04609.7 gi|154150127|ref|YP_001403745.1| - 1.4e-31 109.2 8.9 6.9e-28 97.1 2.8 3.0 1 1 1 2 2 2 2 Methyl-coenzyme M reductase operon protein C MCR_D PF02505.9 gi|154150128|ref|YP_001403746.1| - 4.4e-40 136.7 0.0 5.2e-40 136.5 0.0 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase operon protein D MCR_beta PF02241.13 gi|154150129|ref|YP_001403747.1| - 6.1e-115 382.8 5.0 1e-114 382.0 3.5 1.4 1 0 0 1 1 1 1 Methyl-coenzyme M reductase beta subunit, C-terminal domain MCR_beta_N PF02783.10 gi|154150129|ref|YP_001403747.1| - 3.6e-68 228.6 2.3 5.7e-68 227.9 1.6 1.3 1 0 0 1 1 1 1 Methyl-coenzyme M reductase beta subunit, N-terminal domain FlpD PF02662.11 gi|154150130|ref|YP_001403748.1| - 1.2e-51 173.6 0.0 1.3e-51 173.4 0.0 1.0 1 0 0 1 1 1 1 Methyl-viologen-reducing hydrogenase, delta subunit MOR2-PAG1_mid PF14228.1 gi|154150130|ref|YP_001403748.1| - 0.094 10.2 0.0 0.11 9.9 0.0 1.1 1 0 0 1 1 1 0 Cell morphogenesis central region Fer4_7 PF12838.2 gi|154150131|ref|YP_001403749.1| - 1.1e-14 54.5 27.8 1.4e-08 34.9 7.0 3.4 3 1 0 3 3 2 2 4Fe-4S dicluster domain Fer4 PF00037.22 gi|154150131|ref|YP_001403749.1| - 2.9e-13 48.8 42.4 0.00015 21.1 3.7 4.6 4 0 0 4 4 4 3 4Fe-4S binding domain Pyr_redox_2 PF07992.9 gi|154150131|ref|YP_001403749.1| - 3.7e-13 49.8 0.0 1.2e-11 44.8 0.0 2.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_9 PF13187.1 gi|154150131|ref|YP_001403749.1| - 9.4e-13 48.2 24.7 3.7e-07 30.2 6.4 3.4 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|154150131|ref|YP_001403749.1| - 1.1e-12 47.5 23.9 4.7e-05 23.1 8.5 4.3 3 1 1 4 4 4 4 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|154150131|ref|YP_001403749.1| - 3.9e-12 45.8 28.9 4.8e-08 32.7 6.1 3.9 4 0 0 4 4 3 3 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|154150131|ref|YP_001403749.1| - 5.6e-11 42.2 21.5 1.1e-05 25.3 4.6 3.3 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|154150131|ref|YP_001403749.1| - 5.6e-10 39.8 15.3 0.037 14.7 0.4 4.8 4 0 0 4 4 4 4 4Fe-4S double cluster binding domain Fer4_2 PF12797.2 gi|154150131|ref|YP_001403749.1| - 3.9e-07 29.6 43.3 0.00024 20.8 1.5 5.0 5 0 0 5 5 4 4 4Fe-4S binding domain Fer4_18 PF13746.1 gi|154150131|ref|YP_001403749.1| - 6.3e-07 29.7 28.7 0.014 15.8 0.7 5.3 5 0 0 5 5 5 4 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|154150131|ref|YP_001403749.1| - 9.5e-07 29.0 26.9 5e-06 26.7 2.1 4.2 3 1 1 4 4 4 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|154150131|ref|YP_001403749.1| - 4.2e-06 26.3 37.6 0.01 15.6 1.4 4.8 4 0 0 4 4 4 3 4Fe-4S binding domain Thi4 PF01946.12 gi|154150131|ref|YP_001403749.1| - 3e-05 23.2 0.0 6.2e-05 22.1 0.0 1.5 1 0 0 1 1 1 1 Thi4 family FAD_oxidored PF12831.2 gi|154150131|ref|YP_001403749.1| - 0.00011 21.4 0.4 0.00023 20.3 0.3 1.5 1 0 0 1 1 1 1 FAD dependent oxidoreductase GIDA PF01134.17 gi|154150131|ref|YP_001403749.1| - 0.00019 20.4 0.1 0.00035 19.5 0.1 1.4 1 0 0 1 1 1 1 Glucose inhibited division protein A FAD_binding_2 PF00890.19 gi|154150131|ref|YP_001403749.1| - 0.00033 19.6 0.0 0.00048 19.0 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_3 PF13738.1 gi|154150131|ref|YP_001403749.1| - 0.00036 20.6 0.1 0.0024 17.9 0.0 2.4 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.1 gi|154150131|ref|YP_001403749.1| - 0.00043 20.2 0.1 0.00043 20.2 0.1 2.3 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain DAO PF01266.19 gi|154150131|ref|YP_001403749.1| - 0.00096 18.1 0.4 0.00096 18.1 0.3 2.7 3 0 0 3 3 2 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.14 gi|154150131|ref|YP_001403749.1| - 0.019 14.0 0.6 0.038 13.0 0.4 1.4 1 0 0 1 1 1 0 FAD binding domain Fer4_13 PF13370.1 gi|154150131|ref|YP_001403749.1| - 0.023 15.0 25.5 1 9.7 1.2 4.8 4 0 0 4 4 4 0 4Fe-4S single cluster domain Fer4_15 PF13459.1 gi|154150131|ref|YP_001403749.1| - 0.034 14.6 26.2 0.7 10.5 0.3 4.9 3 1 1 4 4 4 0 4Fe-4S single cluster domain HI0933_like PF03486.9 gi|154150131|ref|YP_001403749.1| - 0.15 10.5 1.8 0.23 9.9 1.2 1.3 1 0 0 1 1 1 0 HI0933-like protein Pyr_redox PF00070.22 gi|154150131|ref|YP_001403749.1| - 0.3 11.4 0.1 0.3 11.4 0.0 2.4 3 0 0 3 3 2 0 Pyridine nucleotide-disulphide oxidoreductase Fer4_4 PF12800.2 gi|154150131|ref|YP_001403749.1| - 4.2 7.9 45.2 0.41 11.1 1.9 6.1 6 0 0 6 6 6 0 4Fe-4S binding domain CCG PF02754.11 gi|154150132|ref|YP_001403750.1| - 3.3e-29 100.7 2.1 2.7e-16 59.3 0.1 2.3 2 0 0 2 2 2 2 Cysteine-rich domain Fer4_8 PF13183.1 gi|154150133|ref|YP_001403751.1| - 3.7e-12 46.0 6.9 6.9e-12 45.2 4.8 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|154150133|ref|YP_001403751.1| - 1.4e-08 34.9 6.2 3e-08 33.8 4.3 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|154150133|ref|YP_001403751.1| - 1.9e-07 31.2 8.8 9.8e-06 25.7 6.4 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|154150133|ref|YP_001403751.1| - 3.5e-06 26.7 7.3 6.7e-06 25.8 5.1 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|154150133|ref|YP_001403751.1| - 5.4e-06 26.7 8.9 0.016 15.5 1.6 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|154150133|ref|YP_001403751.1| - 1e-05 26.1 1.1 0.16 12.7 0.0 2.4 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_7 PF12838.2 gi|154150133|ref|YP_001403751.1| - 0.00025 21.3 10.9 0.0025 18.1 7.9 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|154150133|ref|YP_001403751.1| - 0.0017 18.1 12.2 0.043 13.7 1.2 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.2 gi|154150133|ref|YP_001403751.1| - 0.003 17.7 10.0 0.074 13.4 0.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.22 gi|154150133|ref|YP_001403751.1| - 0.0084 15.6 11.6 0.19 11.3 0.9 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|154150133|ref|YP_001403751.1| - 0.032 14.0 8.5 0.13 12.1 6.0 1.8 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|154150133|ref|YP_001403751.1| - 0.34 10.8 11.0 0.32 10.9 0.8 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_3 PF12798.2 gi|154150133|ref|YP_001403751.1| - 1.5 9.5 14.9 0.44 11.2 1.6 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_20 PF14691.1 gi|154150133|ref|YP_001403751.1| - 2.1 7.9 6.0 10 5.7 0.2 2.3 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4 PF00037.22 gi|154150134|ref|YP_001403752.1| - 1.1e-42 141.9 93.4 9.2e-08 31.3 2.7 8.5 8 1 0 8 8 8 8 4Fe-4S binding domain Fer4_7 PF12838.2 gi|154150134|ref|YP_001403752.1| - 6.5e-34 116.0 117.6 4.2e-11 43.0 5.8 5.3 2 2 4 6 6 6 6 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|154150134|ref|YP_001403752.1| - 5.6e-28 95.5 88.5 1.8e-05 24.4 3.2 8.2 8 0 0 8 8 8 8 4Fe-4S binding domain Fer4_10 PF13237.1 gi|154150134|ref|YP_001403752.1| - 3e-27 94.1 72.1 2.2e-07 30.5 6.5 6.3 3 2 5 8 8 8 8 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|154150134|ref|YP_001403752.1| - 7.7e-27 93.8 64.9 3.3e-08 34.1 4.9 6.6 4 2 2 6 6 6 6 4Fe-4S double cluster binding domain Fer4_9 PF13187.1 gi|154150134|ref|YP_001403752.1| - 8.1e-26 90.0 75.4 1.8e-07 31.2 7.7 6.4 4 2 3 7 7 7 7 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|154150134|ref|YP_001403752.1| - 5.8e-25 86.9 72.3 2.3e-06 27.3 7.4 7.3 5 3 2 7 7 7 7 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|154150134|ref|YP_001403752.1| - 4.9e-22 76.4 85.0 8.4e-06 25.4 2.2 8.3 8 0 0 8 8 8 7 4Fe-4S binding domain Fer4_8 PF13183.1 gi|154150134|ref|YP_001403752.1| - 1.5e-20 72.9 63.3 1.2e-05 25.2 8.6 5.7 4 2 2 6 6 6 6 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|154150134|ref|YP_001403752.1| - 1.1e-15 57.6 61.8 5.3e-05 23.4 5.8 6.5 3 2 3 6 6 6 5 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|154150134|ref|YP_001403752.1| - 1.2e-10 40.7 81.6 0.0013 18.9 2.6 8.3 8 0 0 8 8 7 6 4Fe-4S binding domain Fer4_15 PF13459.1 gi|154150134|ref|YP_001403752.1| - 3.6e-10 40.2 73.1 0.0017 18.8 0.1 8.5 5 1 2 7 7 6 4 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|154150134|ref|YP_001403752.1| - 6e-09 36.1 69.1 0.0045 17.3 0.4 8.2 6 1 2 8 8 8 5 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|154150134|ref|YP_001403752.1| - 1.3e-08 35.0 77.8 0.006 16.9 11.1 8.1 7 1 0 7 7 7 5 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|154150134|ref|YP_001403752.1| - 2e-06 27.9 104.8 0.0082 16.6 3.4 8.5 8 1 0 8 8 8 5 4Fe-4S binding domain Fer4_11 PF13247.1 gi|154150134|ref|YP_001403752.1| - 2e-05 24.4 48.5 0.087 12.7 6.5 5.8 2 2 4 6 6 6 3 4Fe-4S dicluster domain PRP21_like_P PF12230.3 gi|154150134|ref|YP_001403752.1| - 0.0025 17.3 1.2 0.38 10.2 0.1 2.5 2 0 0 2 2 2 1 Pre-mRNA splicing factor PRP21 like protein Fer4 PF00037.22 gi|154150135|ref|YP_001403753.1| - 3.2e-08 32.8 8.0 0.0002 20.8 1.3 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|154150135|ref|YP_001403753.1| - 1.8e-07 31.4 8.0 5.6e-06 26.6 6.2 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|154150135|ref|YP_001403753.1| - 1.9e-06 28.5 6.5 0.015 16.0 0.7 2.2 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.2 gi|154150135|ref|YP_001403753.1| - 0.00029 20.9 8.4 0.12 12.8 0.8 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|154150135|ref|YP_001403753.1| - 0.00056 20.1 10.2 0.0013 18.9 7.1 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|154150135|ref|YP_001403753.1| - 0.00093 19.1 3.4 0.26 11.3 0.2 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|154150135|ref|YP_001403753.1| - 0.0021 18.4 17.1 0.022 15.3 2.4 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|154150135|ref|YP_001403753.1| - 0.0055 16.5 11.5 0.5 10.2 8.0 2.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|154150135|ref|YP_001403753.1| - 0.0069 16.2 1.8 0.0069 16.2 1.2 2.4 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_2 PF12797.2 gi|154150135|ref|YP_001403753.1| - 0.009 15.8 15.6 0.13 12.2 2.9 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|154150135|ref|YP_001403753.1| - 0.01 16.1 4.8 0.33 11.3 0.2 2.2 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|154150135|ref|YP_001403753.1| - 0.028 14.2 10.6 1.2 9.0 8.2 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|154150135|ref|YP_001403753.1| - 0.21 11.4 5.3 1.4 8.8 3.5 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|154150135|ref|YP_001403753.1| - 1.1 9.7 10.9 1.2 9.6 0.7 2.3 2 0 0 2 2 2 0 4Fe-4S dicluster domain Molybdop_Fe4S4 PF04879.11 gi|154150135|ref|YP_001403753.1| - 1.1 9.0 6.0 0.14 11.9 0.6 2.0 2 0 0 2 2 2 0 Molybdopterin oxidoreductase Fe4S4 domain FTR_C PF02741.10 gi|154150136|ref|YP_001403754.1| - 1.7e-67 225.8 4.0 1.7e-67 225.8 2.8 1.8 2 0 0 2 2 2 1 FTR, proximal lobe FTR PF01913.13 gi|154150136|ref|YP_001403754.1| - 8e-64 213.7 0.2 1.4e-63 212.9 0.1 1.4 1 0 0 1 1 1 1 Formylmethanofuran-tetrahydromethanopterin formyltransferase DUF1743 PF08489.6 gi|154150137|ref|YP_001403755.1| - 6.3e-10 38.8 0.9 2.4e-09 36.9 0.0 2.2 3 0 0 3 3 3 1 Domain of unknown function (DUF1743) DUF1743 PF08489.6 gi|154150138|ref|YP_001403756.1| - 1.3e-24 86.2 0.3 5.7e-24 84.1 0.0 2.0 1 1 1 2 2 2 1 Domain of unknown function (DUF1743) Radical_SAM PF04055.16 gi|154150139|ref|YP_001403757.1| - 4.7e-14 52.8 0.1 6.9e-14 52.3 0.1 1.3 1 0 0 1 1 1 1 Radical SAM superfamily TPP_enzyme_C PF02775.16 gi|154150140|ref|YP_001403758.1| - 1e-09 38.1 0.0 1.9e-09 37.2 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_N PF02776.13 gi|154150140|ref|YP_001403758.1| - 0.011 15.2 1.2 0.087 12.3 0.1 2.4 2 0 0 2 2 2 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HMGL-like PF00682.14 gi|154150141|ref|YP_001403759.1| - 2.9e-71 239.8 0.7 4.1e-71 239.3 0.5 1.2 1 0 0 1 1 1 1 HMGL-like Aconitase PF00330.15 gi|154150142|ref|YP_001403760.1| - 3.7e-67 226.8 3.1 2.6e-46 158.0 0.1 2.2 1 1 1 2 2 2 2 Aconitase family (aconitate hydratase) Thioredoxin_2 PF13098.1 gi|154150142|ref|YP_001403760.1| - 0.14 12.3 0.0 2.1 8.5 0.0 2.3 2 0 0 2 2 2 0 Thioredoxin-like domain Aconitase_C PF00694.14 gi|154150143|ref|YP_001403761.1| - 9.1e-20 71.1 0.0 1.1e-19 70.8 0.0 1.2 1 0 0 1 1 1 1 Aconitase C-terminal domain Iso_dh PF00180.15 gi|154150145|ref|YP_001403763.1| - 1.7e-89 300.1 0.0 9e-89 297.8 0.0 1.8 1 1 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase DUF457 PF04307.9 gi|154150146|ref|YP_001403764.1| - 1.9e-11 43.5 4.5 2.5e-11 43.1 3.2 1.1 1 0 0 1 1 1 1 Predicted membrane-bound metal-dependent hydrolase (DUF457) Zn_dep_PLPC PF00882.13 gi|154150146|ref|YP_001403764.1| - 0.00071 19.2 0.1 0.00094 18.8 0.0 1.1 1 0 0 1 1 1 1 Zinc dependent phospholipase C MauE PF07291.6 gi|154150146|ref|YP_001403764.1| - 0.025 14.1 0.1 0.047 13.3 0.0 1.5 1 1 0 1 1 1 0 Methylamine utilisation protein MauE DUF1469 PF07332.6 gi|154150146|ref|YP_001403764.1| - 6.5 6.5 6.7 8 6.2 1.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1469) CxxCxxCC PF03692.10 gi|154150147|ref|YP_001403765.1| - 5.9e-06 26.6 6.4 1.2e-05 25.7 4.4 1.5 1 1 0 1 1 1 1 Putative zinc- or iron-chelating domain DUF2179 PF10035.4 gi|154150148|ref|YP_001403766.1| - 6.8e-08 31.9 0.0 2.4e-07 30.2 0.0 1.9 2 0 0 2 2 2 1 Uncharacterized protein conserved in bacteria (DUF2179) DUF970 PF06153.6 gi|154150148|ref|YP_001403766.1| - 0.023 14.6 0.0 0.038 13.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF970) DUF1691 PF07950.6 gi|154150148|ref|YP_001403766.1| - 0.093 12.6 0.8 0.15 12.0 0.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1691) SelR PF01641.13 gi|154150149|ref|YP_001403767.1| - 3e-50 169.0 0.1 3.6e-50 168.8 0.0 1.1 1 0 0 1 1 1 1 SelR domain DUF2437 PF10370.4 gi|154150149|ref|YP_001403767.1| - 0.067 13.5 0.0 0.53 10.7 0.0 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF2437) HECT_2 PF09814.4 gi|154150149|ref|YP_001403767.1| - 0.13 10.9 0.1 1.1 7.8 0.0 1.9 2 0 0 2 2 2 0 HECT-like Ubiquitin-conjugating enzyme (E2)-binding Yippee-Mis18 PF03226.9 gi|154150149|ref|YP_001403767.1| - 0.28 11.2 3.5 1 9.4 2.0 2.0 1 1 0 1 1 1 0 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly DUF204 PF02659.10 gi|154150150|ref|YP_001403768.1| - 1.1e-30 105.5 24.0 7.4e-16 58.0 5.3 2.2 2 0 0 2 2 2 2 Domain of unknown function DUF Phage_holin_1 PF04531.8 gi|154150150|ref|YP_001403768.1| - 0.12 12.5 6.4 0.65 10.1 0.6 2.4 2 0 0 2 2 2 0 Bacteriophage holin ABC2_membrane_4 PF12730.2 gi|154150150|ref|YP_001403768.1| - 0.32 10.1 16.9 1.1 8.3 0.3 2.2 2 0 0 2 2 2 0 ABC-2 family transporter protein TMEM107 PF14995.1 gi|154150150|ref|YP_001403768.1| - 4.2 7.5 7.7 0.77 9.8 1.2 2.6 2 2 1 3 3 3 0 Transmembrane protein Ribonucleas_3_3 PF14622.1 gi|154150151|ref|YP_001403769.1| - 8e-22 77.5 0.0 1.1e-21 77.1 0.0 1.2 1 0 0 1 1 1 1 Ribonuclease-III-like Ribonuclease_3 PF00636.21 gi|154150151|ref|YP_001403769.1| - 4.4e-12 46.4 0.0 1.1e-11 45.1 0.0 1.8 1 0 0 1 1 1 1 Ribonuclease III domain CorA PF01544.13 gi|154150152|ref|YP_001403770.1| - 4.2e-42 144.1 3.0 5.4e-42 143.8 2.1 1.1 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein AhpC-TSA PF00578.16 gi|154150153|ref|YP_001403771.1| - 1.1e-27 96.1 0.0 1.3e-27 95.9 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.5 gi|154150153|ref|YP_001403771.1| - 5.9e-19 68.0 0.0 6.9e-19 67.8 0.0 1.0 1 0 0 1 1 1 1 Redoxin Thioredoxin_7 PF13899.1 gi|154150153|ref|YP_001403771.1| - 0.048 13.6 0.0 0.072 13.1 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin-like PAD_porph PF04371.10 gi|154150155|ref|YP_001403773.1| - 1.6e-112 375.8 0.0 2e-112 375.4 0.0 1.1 1 0 0 1 1 1 1 Porphyromonas-type peptidyl-arginine deiminase CN_hydrolase PF00795.17 gi|154150155|ref|YP_001403773.1| - 3e-28 98.4 0.0 4.7e-28 97.8 0.0 1.3 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase ABC2_membrane_3 PF12698.2 gi|154150156|ref|YP_001403774.1| - 1.4e-37 129.5 22.6 1.6e-37 129.3 15.6 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.19 gi|154150156|ref|YP_001403774.1| - 3.9e-28 98.0 23.0 6.6e-26 90.7 9.1 2.4 3 0 0 3 3 3 2 ABC-2 type transporter ABC_tran PF00005.22 gi|154150157|ref|YP_001403775.1| - 5e-30 104.5 0.0 8e-30 103.9 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|154150157|ref|YP_001403775.1| - 1.5e-16 61.2 0.1 3.4e-10 40.3 0.0 2.3 2 0 0 2 2 2 2 AAA domain AAA_29 PF13555.1 gi|154150157|ref|YP_001403775.1| - 4.8e-06 25.9 0.1 1.2e-05 24.7 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.1 gi|154150157|ref|YP_001403775.1| - 7.2e-06 25.2 0.5 0.019 14.0 0.1 2.1 2 0 0 2 2 2 2 AAA ATPase domain MutS_V PF00488.16 gi|154150157|ref|YP_001403775.1| - 0.0026 17.1 0.0 0.076 12.4 0.0 2.2 2 0 0 2 2 2 1 MutS domain V AAA_16 PF13191.1 gi|154150157|ref|YP_001403775.1| - 0.0041 17.1 0.0 0.0097 15.9 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain DUF258 PF03193.11 gi|154150157|ref|YP_001403775.1| - 0.0044 16.2 0.1 0.0072 15.5 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_23 PF13476.1 gi|154150157|ref|YP_001403775.1| - 0.0077 16.5 0.1 0.012 15.9 0.1 1.3 1 0 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.18 gi|154150157|ref|YP_001403775.1| - 0.014 15.3 0.1 0.028 14.3 0.0 1.8 1 1 0 1 1 1 0 50S ribosome-binding GTPase DUF4162 PF13732.1 gi|154150157|ref|YP_001403775.1| - 0.033 14.6 0.7 0.066 13.7 0.1 1.8 2 0 0 2 2 1 0 Domain of unknown function (DUF4162) Rad17 PF03215.10 gi|154150157|ref|YP_001403775.1| - 0.044 12.4 0.0 0.052 12.2 0.0 1.1 1 0 0 1 1 1 0 Rad17 cell cycle checkpoint protein ArgK PF03308.11 gi|154150157|ref|YP_001403775.1| - 0.07 11.8 0.0 0.11 11.2 0.0 1.3 1 0 0 1 1 1 0 ArgK protein SMC_N PF02463.14 gi|154150157|ref|YP_001403775.1| - 0.073 12.2 0.1 4 6.5 0.1 2.2 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain Mg_chelatase PF01078.16 gi|154150157|ref|YP_001403775.1| - 0.079 12.1 0.0 0.17 11.0 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_25 PF13481.1 gi|154150157|ref|YP_001403775.1| - 0.15 11.4 0.1 5.8 6.2 0.0 2.3 2 0 0 2 2 2 0 AAA domain MarR PF01047.17 gi|154150158|ref|YP_001403776.1| - 4.5e-16 58.2 0.0 7.5e-16 57.5 0.0 1.4 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.2 gi|154150158|ref|YP_001403776.1| - 4.7e-15 54.9 0.1 8.4e-15 54.1 0.1 1.4 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|154150158|ref|YP_001403776.1| - 2.3e-07 31.0 0.1 4.3e-07 30.1 0.1 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_24 PF13412.1 gi|154150158|ref|YP_001403776.1| - 0.0001 21.5 0.0 0.00036 19.8 0.0 1.9 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding TrmB PF01978.14 gi|154150158|ref|YP_001403776.1| - 0.009 15.6 0.1 0.019 14.6 0.0 1.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.5 gi|154150158|ref|YP_001403776.1| - 0.017 14.6 0.2 0.096 12.2 0.0 2.2 2 1 1 3 3 3 0 IclR helix-turn-helix domain HTH_45 PF14947.1 gi|154150158|ref|YP_001403776.1| - 0.039 13.7 0.0 0.067 13.0 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix HTH_Crp_2 PF13545.1 gi|154150158|ref|YP_001403776.1| - 0.048 13.4 0.0 0.093 12.5 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain FeoC PF09012.5 gi|154150158|ref|YP_001403776.1| - 0.054 13.2 0.0 0.09 12.4 0.0 1.3 1 0 0 1 1 1 0 FeoC like transcriptional regulator Rrf2 PF02082.15 gi|154150158|ref|YP_001403776.1| - 0.094 12.8 0.0 0.19 11.8 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator LysE PF01810.13 gi|154150159|ref|YP_001403777.1| - 1.2e-20 73.6 12.2 1.4e-20 73.3 8.4 1.0 1 0 0 1 1 1 1 LysE type translocator TerC PF03741.11 gi|154150159|ref|YP_001403777.1| - 3 7.2 8.5 8.4 5.7 5.9 2.0 1 1 0 1 1 1 0 Integral membrane protein TerC family Na_H_Exchanger PF00999.16 gi|154150160|ref|YP_001403778.1| - 0.015 13.8 0.1 0.016 13.7 0.1 1.0 1 0 0 1 1 1 0 Sodium/hydrogen exchanger family DUF3169 PF11368.3 gi|154150160|ref|YP_001403778.1| - 0.036 13.2 1.1 0.041 13.0 0.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3169) OPT PF03169.10 gi|154150160|ref|YP_001403778.1| - 0.045 12.1 0.5 0.051 12.0 0.4 1.0 1 0 0 1 1 1 0 OPT oligopeptide transporter protein SNARE_assoc PF09335.6 gi|154150160|ref|YP_001403778.1| - 0.13 12.4 1.3 0.18 12.0 0.8 1.3 1 1 0 1 1 1 0 SNARE associated Golgi protein TspO_MBR PF03073.10 gi|154150162|ref|YP_001403780.1| - 2.1e-48 163.5 22.3 2.6e-48 163.2 15.4 1.1 1 0 0 1 1 1 1 TspO/MBR family SIMPL PF04402.9 gi|154150163|ref|YP_001403781.1| - 0.14 11.9 0.0 0.14 11.9 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF541) eIF-1a PF01176.14 gi|154150164|ref|YP_001403782.1| - 1e-20 72.9 0.5 1.7e-20 72.1 0.3 1.3 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 Antitoxin-MazE PF04014.13 gi|154150164|ref|YP_001403782.1| - 0.099 12.3 0.0 12 5.7 0.0 2.4 2 0 0 2 2 2 0 Antidote-toxin recognition MazE IMS PF00817.15 gi|154150165|ref|YP_001403783.1| - 2e-46 157.4 0.1 3.5e-46 156.6 0.1 1.4 1 0 0 1 1 1 1 impB/mucB/samB family IMS_C PF11799.3 gi|154150165|ref|YP_001403783.1| - 2.8e-21 75.7 0.1 8.2e-21 74.2 0.1 1.7 2 0 0 2 2 2 1 impB/mucB/samB family C-terminal domain IMS_HHH PF11798.3 gi|154150165|ref|YP_001403783.1| - 1.5e-11 43.6 0.1 2.8e-11 42.7 0.0 1.5 1 0 0 1 1 1 1 IMS family HHH motif HHH_5 PF14520.1 gi|154150165|ref|YP_001403783.1| - 0.00041 20.4 1.1 0.0011 19.1 0.8 1.8 1 1 0 1 1 1 1 Helix-hairpin-helix domain DUF4332 PF14229.1 gi|154150165|ref|YP_001403783.1| - 0.088 12.7 0.0 1.2 9.1 0.0 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4332) DUF650 PF04894.7 gi|154150166|ref|YP_001403784.1| - 4.1e-84 282.2 0.0 6e-84 281.7 0.0 1.1 1 0 0 1 1 1 1 Archaeal protein of unknown function (DUF650) DUF651 PF04895.7 gi|154150166|ref|YP_001403784.1| - 4.8e-32 109.8 0.0 7.7e-32 109.1 0.0 1.3 1 0 0 1 1 1 1 Archaeal protein of unknown function (DUF651) Sulf_transp PF04143.9 gi|154150167|ref|YP_001403785.1| - 4.1e-09 36.3 10.5 4.1e-09 36.3 7.3 2.9 4 1 1 5 5 5 1 Sulphur transport DUF4341 PF14241.1 gi|154150167|ref|YP_001403785.1| - 2.4e-05 23.9 0.4 2.4e-05 23.9 0.2 3.4 1 1 2 3 3 3 1 Domain of unknown function (DUF4341) Sulf_transp PF04143.9 gi|154150168|ref|YP_001403786.1| - 5.6e-05 23.0 13.7 5.6e-05 23.0 9.5 2.9 3 1 0 3 3 3 1 Sulphur transport UPF0114 PF03350.11 gi|154150168|ref|YP_001403786.1| - 0.16 11.8 7.6 0.22 11.4 0.3 2.6 2 0 0 2 2 2 0 Uncharacterized protein family, UPF0114 Phage_HK97_TLTM PF06120.6 gi|154150168|ref|YP_001403786.1| - 0.23 10.7 0.5 0.33 10.2 0.3 1.2 1 0 0 1 1 1 0 Tail length tape measure protein DUF1294 PF06961.8 gi|154150169|ref|YP_001403787.1| - 2.1e-21 75.6 0.1 3.1e-21 75.0 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1294) Bax1-I PF01027.15 gi|154150169|ref|YP_001403787.1| - 0.016 14.8 0.3 0.022 14.3 0.2 1.2 1 1 0 1 1 1 0 Inhibitor of apoptosis-promoting Bax1 Na_Ca_ex PF01699.19 gi|154150169|ref|YP_001403787.1| - 0.031 13.8 0.1 0.054 13.1 0.0 1.3 1 1 0 1 1 1 0 Sodium/calcium exchanger protein dCMP_cyt_deam_1 PF00383.17 gi|154150170|ref|YP_001403788.1| - 4.9e-18 64.6 0.2 6.7e-18 64.2 0.1 1.2 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region Abhydrolase_6 PF12697.2 gi|154150171|ref|YP_001403789.1| - 6.5e-12 45.8 0.1 1e-11 45.1 0.1 1.3 1 1 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_5 PF12695.2 gi|154150171|ref|YP_001403789.1| - 3.9e-10 39.6 0.0 4.9e-10 39.3 0.0 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family PGAP1 PF07819.8 gi|154150171|ref|YP_001403789.1| - 0.0076 15.8 0.0 0.015 14.9 0.0 1.4 2 0 0 2 2 2 1 PGAP1-like protein Hydrolase_4 PF12146.3 gi|154150171|ref|YP_001403789.1| - 0.028 14.2 0.0 0.053 13.3 0.0 1.4 1 0 0 1 1 1 0 Putative lysophospholipase Lipase_2 PF01674.13 gi|154150171|ref|YP_001403789.1| - 0.12 11.6 0.0 0.36 10.0 0.0 1.8 1 1 0 1 1 1 0 Lipase (class 2) Acyl-CoA_dh_C PF12806.2 gi|154150172|ref|YP_001403790.1| - 0.066 13.0 0.3 0.14 12.0 0.2 1.7 1 1 0 1 1 1 0 Acetyl-CoA dehydrogenase C-terminal like PAT1 PF09770.4 gi|154150173|ref|YP_001403791.1| - 0.69 8.0 8.5 0.79 7.8 5.9 1.0 1 0 0 1 1 1 0 Topoisomerase II-associated protein PAT1 ABC_tran PF00005.22 gi|154150175|ref|YP_001403793.1| - 1.7e-29 102.8 0.0 2.6e-29 102.2 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|154150175|ref|YP_001403793.1| - 3.4e-12 46.9 0.1 2.5e-07 30.9 0.0 2.1 1 1 1 2 2 2 2 AAA domain AAA_23 PF13476.1 gi|154150175|ref|YP_001403793.1| - 0.001 19.4 0.1 0.0015 18.9 0.1 1.3 1 0 0 1 1 1 1 AAA domain DUF4162 PF13732.1 gi|154150175|ref|YP_001403793.1| - 0.0042 17.5 0.0 0.0092 16.4 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_28 PF13521.1 gi|154150175|ref|YP_001403793.1| - 0.018 15.0 0.0 0.03 14.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain SRP54 PF00448.17 gi|154150175|ref|YP_001403793.1| - 0.026 13.9 0.0 0.16 11.3 0.0 2.0 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain DUF258 PF03193.11 gi|154150175|ref|YP_001403793.1| - 0.034 13.3 0.0 0.05 12.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF258 AAA_13 PF13166.1 gi|154150175|ref|YP_001403793.1| - 0.063 11.7 0.1 1.5 7.1 0.1 2.1 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.1 gi|154150175|ref|YP_001403793.1| - 0.069 12.6 0.2 0.14 11.6 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain TusA PF01206.12 gi|154150175|ref|YP_001403793.1| - 0.088 12.4 0.0 0.19 11.3 0.0 1.5 1 0 0 1 1 1 0 Sulfurtransferase TusA ABC2_membrane PF01061.19 gi|154150176|ref|YP_001403794.1| - 7.7e-25 87.2 16.4 7.7e-25 87.2 11.3 1.6 1 1 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.2 gi|154150176|ref|YP_001403794.1| - 2.3e-10 40.0 22.7 2.3e-10 40.0 15.7 1.7 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.2 gi|154150176|ref|YP_001403794.1| - 0.024 13.5 18.0 0.046 12.5 9.7 2.3 1 1 1 2 2 2 0 ABC-2 family transporter protein Pkinase PF00069.20 gi|154150178|ref|YP_001403796.1| - 1.2e-07 31.1 0.0 4.6e-07 29.2 0.0 1.9 1 1 0 1 1 1 1 Protein kinase domain HHH_5 PF14520.1 gi|154150178|ref|YP_001403796.1| - 6.7e-05 22.9 0.0 0.005 16.9 0.0 2.9 3 0 0 3 3 3 1 Helix-hairpin-helix domain Pkinase_Tyr PF07714.12 gi|154150178|ref|YP_001403796.1| - 0.0098 14.9 0.0 0.041 12.9 0.0 1.9 2 0 0 2 2 2 1 Protein tyrosine kinase Ead_Ea22 PF13935.1 gi|154150178|ref|YP_001403796.1| - 0.016 15.5 0.1 0.4 11.0 0.2 2.4 2 0 0 2 2 2 0 Ead/Ea22-like protein WaaY PF06176.6 gi|154150178|ref|YP_001403796.1| - 0.077 12.2 0.0 0.14 11.3 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide core biosynthesis protein (WaaY) PP2C_2 PF13672.1 gi|154150179|ref|YP_001403797.1| - 4.2e-43 147.2 0.0 4.8e-43 147.0 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C VWA PF00092.23 gi|154150180|ref|YP_001403798.1| - 1.3e-11 44.5 0.0 2e-11 43.9 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.1 gi|154150180|ref|YP_001403798.1| - 8.4e-10 39.0 0.0 6e-09 36.2 0.0 2.0 1 1 0 1 1 1 1 von Willebrand factor type A domain VWA_3 PF13768.1 gi|154150180|ref|YP_001403798.1| - 1.4e-06 28.1 0.0 2.3e-06 27.3 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain vWA-TerF-like PF10138.4 gi|154150180|ref|YP_001403798.1| - 0.066 13.0 0.0 0.4 10.4 0.0 2.0 2 0 0 2 2 2 0 vWA found in TerF C terminus PKD PF00801.15 gi|154150181|ref|YP_001403799.1| - 1.2e-39 133.8 42.5 2.3e-17 62.5 7.8 5.4 5 1 0 5 5 5 3 PKD domain TIG PF01833.19 gi|154150181|ref|YP_001403799.1| - 3.2e-13 49.4 12.5 3.2e-13 49.4 8.7 5.8 4 2 1 5 5 5 1 IPT/TIG domain FGase PF05013.7 gi|154150182|ref|YP_001403800.1| - 7.5e-52 176.4 0.0 9.2e-52 176.1 0.0 1.1 1 0 0 1 1 1 1 N-formylglutamate amidohydrolase PAS_9 PF13426.1 gi|154150183|ref|YP_001403801.1| - 1.7e-38 131.1 0.0 6.9e-10 39.2 0.0 5.2 6 0 0 6 6 6 4 PAS domain PAS_4 PF08448.5 gi|154150183|ref|YP_001403801.1| - 4.5e-38 129.6 0.0 5.8e-11 42.3 0.0 4.4 4 0 0 4 4 4 3 PAS fold PAS PF00989.19 gi|154150183|ref|YP_001403801.1| - 4.8e-34 116.5 0.0 8.7e-10 38.3 0.0 4.6 4 0 0 4 4 4 4 PAS fold Response_reg PF00072.19 gi|154150183|ref|YP_001403801.1| - 2.5e-22 79.0 0.0 5.5e-22 77.9 0.0 1.6 1 0 0 1 1 1 1 Response regulator receiver domain PAS_3 PF08447.6 gi|154150183|ref|YP_001403801.1| - 4.7e-17 61.8 0.0 2.5e-05 24.2 0.0 3.9 3 0 0 3 3 3 3 PAS fold PAS_8 PF13188.1 gi|154150183|ref|YP_001403801.1| - 7.2e-17 60.5 0.0 0.00092 18.9 0.0 4.9 4 0 0 4 4 4 3 PAS domain HATPase_c PF02518.21 gi|154150183|ref|YP_001403801.1| - 2.6e-11 43.2 0.0 5.7e-11 42.1 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_11 PF14598.1 gi|154150183|ref|YP_001403801.1| - 0.00053 19.9 0.0 1.5 8.7 0.0 2.7 2 0 0 2 2 2 2 PAS domain HATPase_c_3 PF13589.1 gi|154150183|ref|YP_001403801.1| - 0.0084 15.7 0.0 0.016 14.8 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPOB_a PF14689.1 gi|154150183|ref|YP_001403801.1| - 0.021 14.3 0.0 0.09 12.3 0.0 2.1 2 0 0 2 2 2 0 Sensor_kinase_SpoOB-type, alpha-helical domain Abhydrolase_3 PF07859.8 gi|154150184|ref|YP_001403802.1| - 2.4e-48 164.5 0.0 2.9e-48 164.2 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold DUF2424 PF10340.4 gi|154150184|ref|YP_001403802.1| - 2e-11 43.1 0.0 2.6e-11 42.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2424) Abhydrolase_5 PF12695.2 gi|154150184|ref|YP_001403802.1| - 2.9e-08 33.5 0.0 3.7e-08 33.2 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_6 PF12697.2 gi|154150184|ref|YP_001403802.1| - 1.8e-05 24.7 4.9 3.9e-05 23.6 3.4 1.6 1 1 0 1 1 1 1 Alpha/beta hydrolase family DUF4013 PF13197.1 gi|154150185|ref|YP_001403803.1| - 0.0076 15.6 44.5 0.012 14.9 10.5 3.1 1 1 2 3 3 3 3 Protein of unknown function (DUF4013) SpoIIE PF07228.7 gi|154150186|ref|YP_001403804.1| - 8.7e-56 188.6 0.6 1.7e-55 187.7 0.4 1.5 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) Cache_1 PF02743.13 gi|154150186|ref|YP_001403804.1| - 3.6e-16 58.5 0.0 7.3e-16 57.4 0.0 1.6 1 0 0 1 1 1 1 Cache domain HAMP PF00672.20 gi|154150186|ref|YP_001403804.1| - 4.3e-13 49.2 0.1 4.3e-13 49.2 0.1 2.2 2 0 0 2 2 2 1 HAMP domain PP2C_2 PF13672.1 gi|154150186|ref|YP_001403804.1| - 0.026 13.9 0.0 0.074 12.4 0.0 1.7 1 0 0 1 1 1 0 Protein phosphatase 2C TarH PF02203.10 gi|154150186|ref|YP_001403804.1| - 0.029 14.1 0.4 0.029 14.1 0.3 3.2 4 0 0 4 4 4 0 Tar ligand binding domain homologue CxxCxxCC PF03692.10 gi|154150187|ref|YP_001403805.1| - 9e-09 35.6 2.0 1.4e-08 35.0 0.6 2.0 1 1 1 2 2 2 1 Putative zinc- or iron-chelating domain Endonuc_Holl PF10107.4 gi|154150190|ref|YP_001403808.1| - 8.1e-40 136.0 0.0 9.9e-40 135.7 0.0 1.0 1 0 0 1 1 1 1 Endonuclease related to archaeal Holliday junction resolvase DUF2636 PF11120.3 gi|154150190|ref|YP_001403808.1| - 0.048 13.1 0.1 0.092 12.2 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2636) DUF1043 PF06295.7 gi|154150190|ref|YP_001403808.1| - 0.13 11.8 0.0 0.27 10.8 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1043) DUF1049 PF06305.6 gi|154150190|ref|YP_001403808.1| - 0.14 11.6 0.5 0.45 10.0 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1049) DUF4245 PF14030.1 gi|154150191|ref|YP_001403809.1| - 0.031 14.0 1.1 0.038 13.7 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4245) Yopt PF09467.5 gi|154150191|ref|YP_001403809.1| - 0.06 13.1 0.0 0.084 12.7 0.0 1.2 1 0 0 1 1 1 0 Hypothetical protein Yopt Cag12 PF13117.1 gi|154150191|ref|YP_001403809.1| - 0.071 13.0 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Cag pathogenicity island protein Cag12 DUF1180 PF06679.7 gi|154150191|ref|YP_001403809.1| - 4.4 7.1 7.2 7.2 6.4 5.0 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1180) DEAD PF00270.24 gi|154150192|ref|YP_001403810.1| - 2.6e-52 176.7 0.1 2.8e-50 170.0 0.1 2.2 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|154150192|ref|YP_001403810.1| - 2.4e-28 97.7 0.3 1.3e-27 95.4 0.5 2.0 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DbpA PF03880.10 gi|154150192|ref|YP_001403810.1| - 7.9e-25 86.3 0.0 2.3e-24 84.8 0.0 1.9 1 0 0 1 1 1 1 DbpA RNA binding domain ResIII PF04851.10 gi|154150192|ref|YP_001403810.1| - 0.00024 20.9 0.0 0.00066 19.5 0.0 1.7 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_30 PF13604.1 gi|154150192|ref|YP_001403810.1| - 0.0023 17.5 0.0 0.0055 16.3 0.0 1.6 1 1 0 1 1 1 1 AAA domain CMS1 PF14617.1 gi|154150192|ref|YP_001403810.1| - 0.0067 15.5 0.0 0.018 14.1 0.0 1.6 1 0 0 1 1 1 1 U3-containing 90S pre-ribosomal complex subunit DUF1253 PF06862.7 gi|154150192|ref|YP_001403810.1| - 0.023 13.1 0.0 9.5 4.4 0.0 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF1253) Helicase_RecD PF05127.9 gi|154150192|ref|YP_001403810.1| - 0.024 14.2 0.0 0.07 12.7 0.0 1.7 2 0 0 2 2 2 0 Helicase SNF2_N PF00176.18 gi|154150192|ref|YP_001403810.1| - 0.088 11.5 0.0 0.13 11.0 0.0 1.2 1 0 0 1 1 1 0 SNF2 family N-terminal domain FMN_red PF03358.10 gi|154150193|ref|YP_001403811.1| - 1.6e-29 102.3 0.0 2.1e-29 101.9 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|154150193|ref|YP_001403811.1| - 2.6e-09 36.9 0.0 3.1e-09 36.6 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold DUF2284 PF10050.4 gi|154150193|ref|YP_001403811.1| - 0.0033 17.0 0.7 0.0049 16.4 0.5 1.2 1 0 0 1 1 1 1 Predicted metal-binding protein (DUF2284) AA_permease_2 PF13520.1 gi|154150194|ref|YP_001403812.1| - 3.6e-54 183.9 58.7 4.3e-54 183.6 40.7 1.0 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.16 gi|154150194|ref|YP_001403812.1| - 8.3e-44 149.7 54.8 1.1e-43 149.3 38.0 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_C PF13906.1 gi|154150194|ref|YP_001403812.1| - 1e-13 50.8 5.9 1e-13 50.8 4.1 5.0 7 1 1 8 8 8 1 C-terminus of AA_permease Spore_permease PF03845.8 gi|154150194|ref|YP_001403812.1| - 0.0034 16.0 7.6 0.0034 16.0 5.2 2.9 3 0 0 3 3 3 2 Spore germination protein Chordopox_A13L PF05961.6 gi|154150194|ref|YP_001403812.1| - 2.7 7.9 5.4 4.8 7.1 0.0 3.3 3 0 0 3 3 3 0 Chordopoxvirus A13L protein Lactamase_B_2 PF12706.2 gi|154150195|ref|YP_001403813.1| - 6.1e-27 94.4 0.0 7.5e-27 94.1 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|154150195|ref|YP_001403813.1| - 2.1e-07 30.7 0.5 7.4e-07 29.0 0.3 1.8 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily AP_endonuc_2 PF01261.19 gi|154150197|ref|YP_001403815.1| - 2.5e-32 111.9 0.0 3e-32 111.6 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel tRNA_int_endo PF01974.12 gi|154150198|ref|YP_001403816.1| - 1.2e-42 143.6 2.6 1.5e-20 72.7 0.1 2.2 2 0 0 2 2 2 2 tRNA intron endonuclease, catalytic C-terminal domain tRNA_int_endo_N PF02778.9 gi|154150198|ref|YP_001403816.1| - 2e-25 88.0 0.4 9e-12 44.3 0.0 3.0 3 0 0 3 3 3 2 tRNA intron endonuclease, N-terminal domain tRNA_int_end_N2 PF12928.2 gi|154150198|ref|YP_001403816.1| - 7.4e-06 25.3 0.0 0.1 12.0 0.0 2.6 2 0 0 2 2 2 2 tRNA-splicing endonuclease subunit sen54 N-term tRNA-synt_1b PF00579.20 gi|154150199|ref|YP_001403817.1| - 8.6e-32 110.4 0.0 1.9e-18 66.6 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (W and Y) tRNA-synt_2d PF01409.15 gi|154150200|ref|YP_001403818.1| - 3.4e-92 308.1 0.0 4.3e-92 307.7 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA-synt_2 PF00152.15 gi|154150200|ref|YP_001403818.1| - 0.00036 19.4 0.4 0.015 14.1 0.0 3.0 3 0 0 3 3 3 1 tRNA synthetases class II (D, K and N) tRNA-synt_2b PF00587.20 gi|154150200|ref|YP_001403818.1| - 0.00036 20.1 0.2 0.00078 19.0 0.1 1.8 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) P22_Cro PF14549.1 gi|154150200|ref|YP_001403818.1| - 0.05 13.3 0.0 0.15 11.7 0.0 1.8 1 0 0 1 1 1 0 DNA-binding transcriptional regulator Cro B5 PF03484.10 gi|154150201|ref|YP_001403819.1| - 5.4e-20 70.9 0.0 8.9e-18 63.8 0.0 2.5 2 0 0 2 2 2 2 tRNA synthetase B5 domain B3_4 PF03483.12 gi|154150201|ref|YP_001403819.1| - 7.6e-17 61.3 0.0 1.4e-16 60.4 0.0 1.4 1 0 0 1 1 1 1 B3/4 domain tRNA-synt_His PF13393.1 gi|154150201|ref|YP_001403819.1| - 0.0033 16.5 0.1 0.0058 15.7 0.0 1.3 1 0 0 1 1 1 1 Histidyl-tRNA synthetase B1 PF02246.10 gi|154150201|ref|YP_001403819.1| - 0.089 12.6 0.3 0.2 11.4 0.2 1.5 1 0 0 1 1 1 0 Protein L b1 domain His_biosynth PF00977.16 gi|154150202|ref|YP_001403820.1| - 4.2e-85 284.6 0.1 4.8e-85 284.4 0.0 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein TMP-TENI PF02581.12 gi|154150202|ref|YP_001403820.1| - 2.6e-05 23.4 0.1 0.081 12.0 0.0 2.3 2 0 0 2 2 2 2 Thiamine monophosphate synthase/TENI NMO PF03060.10 gi|154150202|ref|YP_001403820.1| - 0.00012 21.3 0.8 0.015 14.4 0.2 2.6 2 1 1 3 3 3 1 Nitronate monooxygenase ThiG PF05690.9 gi|154150202|ref|YP_001403820.1| - 0.00025 20.2 0.2 0.37 9.8 0.0 2.2 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG DHO_dh PF01180.16 gi|154150202|ref|YP_001403820.1| - 0.0012 17.8 0.2 0.45 9.4 0.0 2.1 2 0 0 2 2 2 2 Dihydroorotate dehydrogenase Dus PF01207.12 gi|154150202|ref|YP_001403820.1| - 0.0023 16.8 0.0 0.27 9.9 0.0 2.1 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) G3P_antiterm PF04309.7 gi|154150202|ref|YP_001403820.1| - 0.0066 15.4 0.0 0.092 11.7 0.0 2.1 2 0 0 2 2 2 1 Glycerol-3-phosphate responsive antiterminator IMPDH PF00478.20 gi|154150202|ref|YP_001403820.1| - 0.092 11.6 0.3 4.1 6.2 0.0 2.1 2 0 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain PcrB PF01884.12 gi|154150202|ref|YP_001403820.1| - 0.2 10.8 0.9 0.76 8.9 0.0 2.3 2 2 0 2 2 2 0 PcrB family AdoHcyase PF05221.12 gi|154150203|ref|YP_001403821.1| - 3.1e-53 180.4 0.2 3.9e-53 180.1 0.1 1.1 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.16 gi|154150203|ref|YP_001403821.1| - 6.8e-47 159.3 2.1 4.4e-46 156.7 0.6 2.1 2 0 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.14 gi|154150203|ref|YP_001403821.1| - 2.7e-09 36.4 0.2 5.2e-09 35.4 0.1 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.7 gi|154150203|ref|YP_001403821.1| - 4.5e-06 26.1 0.2 1.1e-05 24.8 0.2 1.7 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain TrkA_N PF02254.13 gi|154150203|ref|YP_001403821.1| - 0.0015 18.5 0.1 0.0037 17.2 0.0 1.7 1 0 0 1 1 1 1 TrkA-N domain AlaDh_PNT_C PF01262.16 gi|154150203|ref|YP_001403821.1| - 0.003 17.1 0.8 0.023 14.2 0.2 2.5 1 1 1 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain Oxidored_nitro PF00148.14 gi|154150203|ref|YP_001403821.1| - 0.067 11.8 2.2 0.87 8.1 0.5 2.3 1 1 1 2 2 2 0 Nitrogenase component 1 type Oxidoreductase EamA PF00892.15 gi|154150204|ref|YP_001403822.1| - 6.2e-21 74.7 39.6 1e-13 51.4 6.4 2.6 2 1 1 3 3 3 2 EamA-like transporter family EmrE PF13536.1 gi|154150204|ref|YP_001403822.1| - 1.4e-07 31.6 8.5 1.4e-07 31.6 5.9 3.5 1 1 3 4 4 4 1 Multidrug resistance efflux transporter OGG_N PF07934.7 gi|154150205|ref|YP_001403823.1| - 1.1e-24 86.6 0.0 1.9e-24 85.9 0.0 1.4 1 0 0 1 1 1 1 8-oxoguanine DNA glycosylase, N-terminal domain HhH-GPD PF00730.20 gi|154150205|ref|YP_001403823.1| - 2.2e-06 27.9 0.0 3.2e-06 27.3 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.18 gi|154150205|ref|YP_001403823.1| - 0.11 12.2 0.0 0.22 11.2 0.0 1.5 1 0 0 1 1 1 0 Helix-hairpin-helix motif HHH_5 PF14520.1 gi|154150205|ref|YP_001403823.1| - 0.16 12.1 0.1 0.53 10.4 0.0 1.8 1 1 0 1 1 1 0 Helix-hairpin-helix domain Radical_SAM PF04055.16 gi|154150208|ref|YP_001403826.1| - 1.3e-19 70.9 0.2 1.7e-19 70.5 0.1 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|154150208|ref|YP_001403826.1| - 1.8e-05 24.8 0.1 4e-05 23.7 0.1 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|154150208|ref|YP_001403826.1| - 1.8e-05 24.7 0.0 3.8e-05 23.6 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain RhodobacterPufX PF11511.3 gi|154150209|ref|YP_001403827.1| - 1.1 8.6 7.2 1.2 8.5 0.0 2.9 3 0 0 3 3 3 0 Intrinsic membrane protein PufX FKBP_C PF00254.23 gi|154150210|ref|YP_001403828.1| - 1.8e-22 79.1 0.0 2.7e-22 78.5 0.0 1.4 1 1 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase Big_5 PF13205.1 gi|154150210|ref|YP_001403828.1| - 1.2 9.7 7.3 12 6.5 0.8 3.1 2 1 1 3 3 3 0 Bacterial Ig-like domain SH3BP5 PF05276.9 gi|154150211|ref|YP_001403829.1| - 0.0041 16.4 0.4 0.0047 16.2 0.2 1.2 1 0 0 1 1 1 1 SH3 domain-binding protein 5 (SH3BP5) Microtub_bind PF13931.1 gi|154150211|ref|YP_001403829.1| - 0.11 12.5 1.0 9.5 6.3 0.2 2.0 1 1 1 2 2 2 0 Kinesin-associated microtubule-binding CRISPR_Cas2 PF09827.4 gi|154150211|ref|YP_001403829.1| - 0.12 12.4 0.1 0.2 11.8 0.1 1.4 1 1 0 1 1 1 0 CRISPR associated protein Cas2 Vpu PF00558.14 gi|154150211|ref|YP_001403829.1| - 0.26 10.8 1.8 0.23 11.0 0.3 1.6 2 0 0 2 2 2 0 Vpu protein Enkurin PF13864.1 gi|154150211|ref|YP_001403829.1| - 0.66 10.2 4.9 2.1 8.6 0.1 2.2 2 1 0 2 2 2 0 Calmodulin-binding NTP_transf_2 PF01909.18 gi|154150212|ref|YP_001403830.1| - 6.9e-10 39.1 0.0 8e-10 38.9 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyltransferase domain UPF0150 PF03681.10 gi|154150213|ref|YP_001403831.1| - 8.5e-18 63.7 0.0 1.4e-17 62.9 0.0 1.4 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0150) DUF3832 PF12909.2 gi|154150213|ref|YP_001403831.1| - 0.0065 16.5 0.0 0.0082 16.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3832) RRP7 PF12923.2 gi|154150213|ref|YP_001403831.1| - 0.14 12.1 0.0 0.18 11.7 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA-processing protein 7 (RRP7) AAT PF03417.11 gi|154150214|ref|YP_001403832.1| - 6e-10 38.9 0.0 8.5e-10 38.4 0.0 1.2 1 0 0 1 1 1 1 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase CBAH PF02275.13 gi|154150214|ref|YP_001403832.1| - 2.6e-09 36.9 0.0 4.9e-09 36.0 0.0 1.5 2 0 0 2 2 2 1 Linear amide C-N hydrolases, choloylglycine hydrolase family TPP_enzyme_C PF02775.16 gi|154150215|ref|YP_001403833.1| - 3.8e-26 91.5 0.8 1.8e-25 89.3 0.0 2.1 1 1 1 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YjeF_N PF03853.10 gi|154150215|ref|YP_001403833.1| - 0.017 14.7 0.6 6.7 6.2 0.0 2.8 3 0 0 3 3 3 0 YjeF-related protein N-terminus Hydantoinase_A PF01968.13 gi|154150215|ref|YP_001403833.1| - 0.053 12.6 0.0 0.2 10.7 0.0 1.9 2 0 0 2 2 2 0 Hydantoinase/oxoprolinase POR_N PF01855.14 gi|154150216|ref|YP_001403834.1| - 3.8e-70 235.9 0.5 5.3e-70 235.5 0.3 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Transketolase_C PF02780.15 gi|154150216|ref|YP_001403834.1| - 1.7e-05 24.7 0.0 4e-05 23.5 0.0 1.5 1 0 0 1 1 1 1 Transketolase, C-terminal domain Fer4_7 PF12838.2 gi|154150217|ref|YP_001403835.1| - 1e-10 41.7 42.3 5.3e-07 29.9 11.1 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4 PF00037.22 gi|154150217|ref|YP_001403835.1| - 1.1e-10 40.6 22.5 3e-06 26.5 2.8 2.5 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|154150217|ref|YP_001403835.1| - 1.7e-09 37.3 27.3 1.4e-06 28.0 11.2 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|154150217|ref|YP_001403835.1| - 2.6e-07 30.2 21.3 0.0002 21.0 3.7 2.5 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|154150217|ref|YP_001403835.1| - 5.1e-07 30.3 15.9 0.0014 19.3 3.0 2.2 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|154150217|ref|YP_001403835.1| - 1.2e-06 28.2 13.9 2.8e-06 27.0 9.7 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|154150217|ref|YP_001403835.1| - 1.8e-06 27.5 16.5 0.00062 19.5 1.7 2.9 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|154150217|ref|YP_001403835.1| - 3.3e-06 27.2 16.7 9.4e-06 25.8 11.7 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|154150217|ref|YP_001403835.1| - 6.9e-05 22.8 13.2 0.02 14.9 1.6 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|154150217|ref|YP_001403835.1| - 0.00012 22.4 10.3 0.027 14.8 1.8 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|154150217|ref|YP_001403835.1| - 0.0049 17.0 16.2 0.23 11.8 1.4 2.9 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|154150217|ref|YP_001403835.1| - 0.0054 17.0 16.3 0.12 12.7 1.9 2.2 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|154150217|ref|YP_001403835.1| - 0.049 14.2 25.1 0.094 13.3 4.1 2.7 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_11 PF13247.1 gi|154150217|ref|YP_001403835.1| - 0.083 12.7 6.7 0.12 12.3 4.7 1.3 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|154150217|ref|YP_001403835.1| - 0.091 13.1 12.7 0.17 12.3 2.0 2.4 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_15 PF13459.1 gi|154150217|ref|YP_001403835.1| - 0.24 11.9 15.5 0.21 12.1 2.0 2.3 1 1 1 2 2 2 0 4Fe-4S single cluster domain POR PF01558.13 gi|154150218|ref|YP_001403836.1| - 6.1e-38 130.4 0.3 7.1e-38 130.2 0.2 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase DUF3572 PF12096.3 gi|154150218|ref|YP_001403836.1| - 0.24 11.2 2.7 0.32 10.8 0.0 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3572) Epimerase PF01370.16 gi|154150220|ref|YP_001403838.1| - 6.7e-47 159.9 0.0 8.8e-47 159.5 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.14 gi|154150220|ref|YP_001403838.1| - 1.2e-16 60.2 0.0 1.5e-16 59.9 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.10 gi|154150220|ref|YP_001403838.1| - 3.8e-14 52.2 0.0 3e-13 49.3 0.0 2.1 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.12 gi|154150220|ref|YP_001403838.1| - 4.4e-14 52.0 0.0 7e-14 51.3 0.0 1.3 1 1 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.7 gi|154150220|ref|YP_001403838.1| - 4.8e-14 51.8 0.1 2.2e-09 36.6 0.0 2.2 1 1 1 2 2 2 2 Male sterility protein NAD_binding_10 PF13460.1 gi|154150220|ref|YP_001403838.1| - 9.3e-09 35.5 0.0 1.5e-08 34.8 0.0 1.4 1 0 0 1 1 1 1 NADH(P)-binding adh_short PF00106.20 gi|154150220|ref|YP_001403838.1| - 0.00015 21.6 2.3 0.00027 20.9 0.6 2.1 2 1 0 2 2 2 1 short chain dehydrogenase KR PF08659.5 gi|154150220|ref|YP_001403838.1| - 0.013 15.2 0.0 0.023 14.3 0.0 1.4 1 0 0 1 1 1 0 KR domain NmrA PF05368.8 gi|154150220|ref|YP_001403838.1| - 0.071 12.3 0.0 0.13 11.4 0.0 1.6 2 0 0 2 2 2 0 NmrA-like family bPH_5 PF10882.3 gi|154150220|ref|YP_001403838.1| - 0.093 12.5 0.0 0.17 11.6 0.0 1.4 1 0 0 1 1 1 0 Bacterial PH domain PhosphMutase PF10143.4 gi|154150221|ref|YP_001403839.1| - 3.9e-52 176.3 0.0 5.4e-52 175.9 0.0 1.2 1 0 0 1 1 1 1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Metalloenzyme PF01676.13 gi|154150221|ref|YP_001403839.1| - 1e-46 159.3 0.0 1.2e-46 159.1 0.0 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Phosphodiest PF01663.17 gi|154150221|ref|YP_001403839.1| - 0.0024 17.2 0.0 0.013 14.8 0.0 1.9 2 0 0 2 2 2 1 Type I phosphodiesterase / nucleotide pyrophosphatase AAA_16 PF13191.1 gi|154150222|ref|YP_001403840.1| - 3.8e-11 43.3 0.0 1.5e-10 41.3 0.0 2.1 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.1 gi|154150222|ref|YP_001403840.1| - 2.4e-10 40.6 0.0 4.7e-10 39.7 0.0 1.4 1 0 0 1 1 1 1 AAA domain Cdc6_C PF09079.6 gi|154150222|ref|YP_001403840.1| - 2.7e-06 26.9 0.1 9.1e-06 25.3 0.1 2.0 1 1 0 1 1 1 1 CDC6, C terminal NACHT PF05729.7 gi|154150222|ref|YP_001403840.1| - 0.00056 19.6 0.0 0.00092 18.8 0.0 1.3 1 0 0 1 1 1 1 NACHT domain Arch_ATPase PF01637.13 gi|154150222|ref|YP_001403840.1| - 0.0024 17.6 0.0 0.0044 16.7 0.0 1.5 1 0 0 1 1 1 1 Archaeal ATPase Viral_helicase1 PF01443.13 gi|154150222|ref|YP_001403840.1| - 0.0025 17.3 0.1 0.0038 16.7 0.0 1.3 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase KTI12 PF08433.5 gi|154150222|ref|YP_001403840.1| - 0.0049 16.1 0.0 0.01 15.0 0.0 1.5 1 1 0 1 1 1 1 Chromatin associated protein KTI12 AAA PF00004.24 gi|154150222|ref|YP_001403840.1| - 0.0065 16.6 0.0 0.012 15.7 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.1 gi|154150222|ref|YP_001403840.1| - 0.015 15.1 0.0 0.032 14.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain DUF835 PF05763.7 gi|154150222|ref|YP_001403840.1| - 0.016 14.7 0.1 0.028 13.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF835) AAA_18 PF13238.1 gi|154150222|ref|YP_001403840.1| - 0.018 15.3 0.0 0.063 13.5 0.0 1.9 1 1 0 1 1 1 0 AAA domain SRP54 PF00448.17 gi|154150222|ref|YP_001403840.1| - 0.024 14.0 0.0 0.034 13.5 0.0 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain Phage-MuB_C PF09077.6 gi|154150222|ref|YP_001403840.1| - 0.04 13.6 0.0 0.19 11.4 0.0 2.2 3 0 0 3 3 1 0 Mu B transposition protein, C terminal AAA_14 PF13173.1 gi|154150222|ref|YP_001403840.1| - 0.048 13.5 0.5 0.68 9.8 0.0 2.3 1 1 0 2 2 2 0 AAA domain DUF2075 PF09848.4 gi|154150222|ref|YP_001403840.1| - 0.071 12.0 0.0 0.11 11.4 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) T2SE PF00437.15 gi|154150222|ref|YP_001403840.1| - 0.072 11.9 0.0 0.13 11.1 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein ArgK PF03308.11 gi|154150222|ref|YP_001403840.1| - 0.11 11.2 0.0 0.19 10.4 0.0 1.3 1 0 0 1 1 1 0 ArgK protein NB-ARC PF00931.17 gi|154150222|ref|YP_001403840.1| - 0.14 10.9 0.0 0.23 10.2 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain AAA_11 PF13086.1 gi|154150222|ref|YP_001403840.1| - 0.15 11.5 0.0 0.2 11.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain MCH PF02289.11 gi|154150223|ref|YP_001403841.1| - 4.4e-129 429.9 0.3 5e-129 429.8 0.2 1.0 1 0 0 1 1 1 1 Cyclohydrolase (MCH) Acylphosphatase PF00708.13 gi|154150224|ref|YP_001403842.1| - 3.9e-22 78.1 0.0 4.2e-22 78.0 0.0 1.0 1 0 0 1 1 1 1 Acylphosphatase T2SM_b PF10741.4 gi|154150224|ref|YP_001403842.1| - 0.056 13.0 0.0 0.073 12.7 0.0 1.2 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein M subtype b Phospholamban PF04272.9 gi|154150225|ref|YP_001403843.1| - 0.11 11.9 0.1 0.18 11.2 0.1 1.3 1 0 0 1 1 1 0 Phospholamban DUF4493 PF14900.1 gi|154150225|ref|YP_001403843.1| - 0.11 12.0 0.2 0.16 11.5 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4493) PALP PF00291.20 gi|154150226|ref|YP_001403844.1| - 1.3e-67 228.1 3.0 1.6e-67 227.9 2.1 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme zinc_ribbon_2 PF13240.1 gi|154150226|ref|YP_001403844.1| - 0.05 13.0 1.8 0.13 11.7 1.3 1.7 1 1 0 1 1 1 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.2 gi|154150226|ref|YP_001403844.1| - 0.099 12.4 2.1 0.19 11.5 1.5 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain A2L_zn_ribbon PF08792.5 gi|154150226|ref|YP_001403844.1| - 0.2 11.1 1.1 8.1 6.0 0.1 2.3 2 0 0 2 2 2 0 A2L zinc ribbon domain CN_hydrolase PF00795.17 gi|154150227|ref|YP_001403845.1| - 4.2e-23 81.6 0.0 7.1e-23 80.9 0.0 1.4 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase DUF1081 PF06448.6 gi|154150227|ref|YP_001403845.1| - 0.0077 16.1 0.0 0.013 15.3 0.0 1.3 1 0 0 1 1 1 1 Domain of Unknown Function (DUF1081) CopD PF05425.8 gi|154150228|ref|YP_001403846.1| - 0.06 13.5 5.4 0.069 13.3 3.7 1.1 1 0 0 1 1 1 0 Copper resistance protein D DUF3483 PF11982.3 gi|154150228|ref|YP_001403846.1| - 0.092 12.0 4.7 0.098 11.9 3.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3483) DUF1430 PF07242.6 gi|154150228|ref|YP_001403846.1| - 0.15 12.1 3.4 0.18 11.9 2.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1430) DUF843 PF05814.6 gi|154150228|ref|YP_001403846.1| - 0.25 11.1 1.4 0.26 11.0 1.0 1.1 1 0 0 1 1 1 0 Baculovirus protein of unknown function (DUF843) DUF2484 PF10658.4 gi|154150228|ref|YP_001403846.1| - 0.46 10.6 4.3 0.99 9.5 3.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2484) DUF4131 PF13567.1 gi|154150228|ref|YP_001403846.1| - 1.9 7.8 4.2 2 7.7 2.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) SdpI PF13630.1 gi|154150228|ref|YP_001403846.1| - 4.9 6.9 10.3 6.2 6.6 7.1 1.2 1 0 0 1 1 1 0 SdpI/YhfL protein family DUF1700 PF08006.6 gi|154150228|ref|YP_001403846.1| - 5.2 6.3 7.0 6.2 6.0 4.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) Claudin_2 PF13903.1 gi|154150228|ref|YP_001403846.1| - 7.6 6.1 8.5 9.5 5.8 5.9 1.2 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction MarC PF01914.12 gi|154150229|ref|YP_001403847.1| - 2.2e-57 193.4 17.1 2.5e-57 193.2 11.8 1.0 1 0 0 1 1 1 1 MarC family integral membrane protein LysE PF01810.13 gi|154150229|ref|YP_001403847.1| - 1.8e-08 33.9 5.1 2.3e-08 33.5 3.5 1.1 1 0 0 1 1 1 1 LysE type translocator DUF3040 PF11239.3 gi|154150229|ref|YP_001403847.1| - 0.45 10.6 4.7 4.7 7.3 0.2 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) AmiS_UreI PF02293.10 gi|154150229|ref|YP_001403847.1| - 0.71 9.5 5.4 0.54 9.8 0.2 2.6 1 1 2 3 3 3 0 AmiS/UreI family transporter DUF2910 PF11139.3 gi|154150229|ref|YP_001403847.1| - 3.2 6.8 11.5 0.21 10.7 1.6 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF2910) BCD PF15461.1 gi|154150229|ref|YP_001403847.1| - 3.8 6.8 11.2 0.63 9.4 1.9 2.0 1 1 1 2 2 2 0 Beta-carotene 15,15'-dioxygenase DUF3522 PF12036.3 gi|154150229|ref|YP_001403847.1| - 8.9 6.0 8.0 0.91 9.2 1.2 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF3522) zf-DHHC PF01529.15 gi|154150229|ref|YP_001403847.1| - 9 5.6 7.0 11 5.4 0.5 2.2 2 0 0 2 2 2 0 DHHC palmitoyltransferase NDK PF00334.14 gi|154150230|ref|YP_001403848.1| - 1.1e-51 174.1 0.0 1.2e-51 173.9 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase Ribosomal_L24e PF01246.15 gi|154150231|ref|YP_001403849.1| - 3.4e-24 84.4 0.5 3.6e-24 84.3 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L24e zf-FCS PF06467.9 gi|154150231|ref|YP_001403849.1| - 8e-06 25.3 3.2 1.2e-05 24.8 2.2 1.3 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif YHS PF04945.8 gi|154150231|ref|YP_001403849.1| - 8.9e-05 22.2 0.4 0.00012 21.8 0.3 1.2 1 0 0 1 1 1 1 YHS domain zf-MYND PF01753.13 gi|154150231|ref|YP_001403849.1| - 0.017 14.9 0.0 0.034 14.0 0.0 1.5 1 1 0 1 1 1 0 MYND finger Zn_ribbon_recom PF13408.1 gi|154150231|ref|YP_001403849.1| - 0.039 14.2 0.3 0.054 13.7 0.2 1.2 1 0 0 1 1 1 0 Recombinase zinc beta ribbon domain ICAM_N PF03921.9 gi|154150231|ref|YP_001403849.1| - 0.043 13.2 0.0 0.054 12.9 0.0 1.2 1 0 0 1 1 1 0 Intercellular adhesion molecule (ICAM), N-terminal domain Metallothio_Pro PF02069.11 gi|154150231|ref|YP_001403849.1| - 0.095 12.5 1.0 0.16 11.7 0.7 1.6 1 1 0 1 1 1 0 Prokaryotic metallothionein DUF581 PF04570.9 gi|154150231|ref|YP_001403849.1| - 0.17 11.2 1.1 0.31 10.3 0.8 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF581) DUF2175 PF09943.4 gi|154150231|ref|YP_001403849.1| - 0.17 11.9 0.4 0.19 11.8 0.3 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2175) DUF2116 PF09889.4 gi|154150231|ref|YP_001403849.1| - 0.17 11.6 0.9 3.4 7.5 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) C1_3 PF07649.7 gi|154150231|ref|YP_001403849.1| - 0.22 11.5 1.8 6.1 6.9 0.1 2.2 2 0 0 2 2 2 0 C1-like domain zf-C4_ClpX PF06689.8 gi|154150231|ref|YP_001403849.1| - 0.34 10.4 2.8 0.56 9.7 2.0 1.6 1 1 0 1 1 1 0 ClpX C4-type zinc finger DUF329 PF03884.9 gi|154150231|ref|YP_001403849.1| - 0.54 9.8 2.2 2.2 7.8 1.6 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF329) zf-HIT PF04438.11 gi|154150231|ref|YP_001403849.1| - 0.57 9.8 4.0 10 5.8 2.8 2.1 1 1 0 1 1 1 0 HIT zinc finger Ribosomal_S28e PF01200.13 gi|154150232|ref|YP_001403850.1| - 7.8e-31 105.6 0.5 8.4e-31 105.5 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein S28e Ribosomal_L7Ae PF01248.21 gi|154150233|ref|YP_001403851.1| - 1.8e-23 81.8 0.7 2.2e-23 81.5 0.5 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PELOTA_1 PF15608.1 gi|154150233|ref|YP_001403851.1| - 0.021 14.5 0.0 0.038 13.7 0.0 1.4 1 0 0 1 1 1 0 PELOTA RNA binding domain DUF1028 PF06267.7 gi|154150233|ref|YP_001403851.1| - 0.069 12.5 0.4 0.13 11.7 0.1 1.6 2 0 0 2 2 2 0 Family of unknown function (DUF1028) YtxH PF12732.2 gi|154150233|ref|YP_001403851.1| - 1.6 9.1 6.1 3.4 8.0 1.4 2.1 2 0 0 2 2 2 0 YtxH-like protein DUF2298 PF10060.4 gi|154150234|ref|YP_001403852.1| - 5.3e-97 325.6 37.3 5.3e-97 325.6 25.9 1.7 2 0 0 2 2 2 1 Uncharacterized membrane protein (DUF2298) UPF0104 PF03706.8 gi|154150235|ref|YP_001403853.1| - 7.3e-43 146.9 32.8 9.7e-43 146.5 22.8 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0104) DUF4381 PF14316.1 gi|154150235|ref|YP_001403853.1| - 0.47 10.5 5.3 1 9.4 0.0 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4381) Glycos_transf_2 PF00535.21 gi|154150236|ref|YP_001403854.1| - 6e-25 87.8 0.0 7.9e-25 87.4 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|154150236|ref|YP_001403854.1| - 1e-09 38.5 0.1 2.5e-09 37.3 0.1 1.6 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.4 gi|154150236|ref|YP_001403854.1| - 2.7e-08 33.2 0.0 3.1e-08 33.0 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|154150236|ref|YP_001403854.1| - 0.0016 18.7 0.0 0.0034 17.6 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 Amino_oxidase PF01593.19 gi|154150237|ref|YP_001403855.1| - 2.2e-13 50.0 0.0 7.3e-10 38.5 0.0 2.7 2 1 0 2 2 2 2 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.1 gi|154150237|ref|YP_001403855.1| - 1.3e-12 47.5 0.2 2.7e-12 46.5 0.2 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.9 gi|154150237|ref|YP_001403855.1| - 0.0092 15.8 0.0 0.015 15.2 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.19 gi|154150237|ref|YP_001403855.1| - 0.013 14.4 0.7 0.77 8.5 0.7 2.3 2 1 0 2 2 2 0 FAD dependent oxidoreductase FAD_binding_2 PF00890.19 gi|154150237|ref|YP_001403855.1| - 0.016 14.0 0.2 0.032 13.0 0.1 1.4 1 0 0 1 1 1 0 FAD binding domain FAD_oxidored PF12831.2 gi|154150237|ref|YP_001403855.1| - 0.018 14.1 0.0 0.064 12.3 0.0 1.7 2 0 0 2 2 2 0 FAD dependent oxidoreductase HI0933_like PF03486.9 gi|154150237|ref|YP_001403855.1| - 0.15 10.5 0.6 0.93 7.8 0.2 1.9 2 0 0 2 2 2 0 HI0933-like protein Tubulin PF00091.20 gi|154150238|ref|YP_001403856.1| - 1e-26 94.1 0.1 2.1e-26 93.1 0.0 1.5 1 1 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_2 PF13809.1 gi|154150238|ref|YP_001403856.1| - 0.078 11.8 0.0 0.13 11.1 0.0 1.3 1 0 0 1 1 1 0 Tubulin like Calici_MSP PF05752.6 gi|154150239|ref|YP_001403857.1| - 0.0068 16.0 1.3 0.013 15.0 0.9 1.5 1 0 0 1 1 1 1 Calicivirus minor structural protein ATP-synt_DE PF00401.15 gi|154150239|ref|YP_001403857.1| - 0.034 14.0 0.1 0.034 14.0 0.1 3.4 4 0 0 4 4 4 0 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Chordopox_A13L PF05961.6 gi|154150239|ref|YP_001403857.1| - 0.26 11.2 1.3 0.79 9.7 0.9 1.8 1 0 0 1 1 1 0 Chordopoxvirus A13L protein DUF4398 PF14346.1 gi|154150239|ref|YP_001403857.1| - 0.28 11.2 15.5 2.3 8.3 5.5 2.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4398) DUF3316 PF11777.3 gi|154150239|ref|YP_001403857.1| - 2.8 7.7 8.9 0.51 10.1 2.2 2.5 2 1 1 3 3 3 0 Protein of unknown function (DUF3316) TPR_11 PF13414.1 gi|154150239|ref|YP_001403857.1| - 3.7 7.2 6.5 3.5 7.3 1.0 2.5 2 0 0 2 2 2 0 TPR repeat Rifin_STEVOR PF02009.11 gi|154150239|ref|YP_001403857.1| - 4 6.9 13.4 0.28 10.8 0.4 2.2 1 1 0 2 2 2 0 Rifin/stevor family PMT_2 PF13231.1 gi|154150240|ref|YP_001403858.1| - 3.2e-18 66.1 20.9 3.2e-18 66.1 14.5 2.7 3 1 0 3 3 3 1 Dolichyl-phosphate-mannose-protein mannosyltransferase PMT PF02366.13 gi|154150240|ref|YP_001403858.1| - 1.6e-08 34.2 23.7 1.6e-08 34.2 16.5 2.2 2 1 0 2 2 2 1 Dolichyl-phosphate-mannose-protein mannosyltransferase Ribosomal_S10 PF00338.17 gi|154150241|ref|YP_001403859.1| - 1.4e-28 98.5 0.0 1.6e-28 98.3 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e GTP_EFTU PF00009.22 gi|154150242|ref|YP_001403860.1| - 1.4e-57 194.1 0.1 1.7e-57 193.9 0.0 1.1 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.12 gi|154150242|ref|YP_001403860.1| - 1.2e-32 111.9 1.7 6.4e-32 109.6 0.1 2.7 3 0 0 3 3 3 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.20 gi|154150242|ref|YP_001403860.1| - 2e-19 69.4 1.2 1.5e-18 66.6 0.5 2.4 2 0 0 2 2 2 1 Elongation factor Tu domain 2 GTP_EFTU_D4 PF14578.1 gi|154150242|ref|YP_001403860.1| - 2.7e-07 30.1 0.2 5.6e-07 29.0 0.1 1.5 1 0 0 1 1 1 1 Elongation factor Tu domain 4 MMR_HSR1 PF01926.18 gi|154150242|ref|YP_001403860.1| - 6.6e-06 26.0 0.0 2.1e-05 24.4 0.0 1.8 1 1 0 1 1 1 1 50S ribosome-binding GTPase Miro PF08477.8 gi|154150242|ref|YP_001403860.1| - 7.3e-05 23.2 0.0 0.0014 19.0 0.0 2.6 2 1 0 2 2 2 1 Miro-like protein Gtr1_RagA PF04670.7 gi|154150242|ref|YP_001403860.1| - 0.0032 16.6 0.1 0.038 13.1 0.1 2.0 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region FeoB_N PF02421.13 gi|154150242|ref|YP_001403860.1| - 0.14 11.4 0.3 0.63 9.2 0.1 2.0 2 1 0 2 2 2 0 Ferrous iron transport protein B CobS PF02654.10 gi|154150244|ref|YP_001403862.1| - 1.1e-46 159.3 13.2 1.3e-46 159.1 9.2 1.0 1 0 0 1 1 1 1 Cobalamin-5-phosphate synthase PgpA PF04608.8 gi|154150245|ref|YP_001403863.1| - 6.9e-10 38.9 0.0 8.9e-10 38.5 0.0 1.2 1 0 0 1 1 1 1 Phosphatidylglycerophosphatase A DBI_PRT PF02277.12 gi|154150246|ref|YP_001403864.1| - 2.4e-17 63.0 0.2 7.7e-17 61.3 0.0 1.7 1 1 1 2 2 2 1 Phosphoribosyltransferase GATase PF00117.23 gi|154150247|ref|YP_001403865.1| - 4.7e-32 111.0 0.0 5.5e-32 110.7 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|154150247|ref|YP_001403865.1| - 1.9e-09 37.2 0.1 2e-08 33.9 0.0 2.3 1 1 1 2 2 2 1 Peptidase C26 DUF3821 PF12863.2 gi|154150248|ref|YP_001403866.1| - 2e-65 220.4 0.5 2e-65 220.4 0.4 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF3821) Nitroreductase PF00881.19 gi|154150249|ref|YP_001403867.1| - 2e-28 99.2 0.0 2.4e-28 99.0 0.0 1.1 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.1 gi|154150249|ref|YP_001403867.1| - 0.00058 19.0 0.2 0.21 10.7 0.0 2.6 1 1 1 2 2 2 2 Putative TM nitroreductase Methyltransf_6 PF03737.10 gi|154150250|ref|YP_001403868.1| - 2.9e-37 127.8 0.5 5.3e-37 127.0 0.4 1.4 1 0 0 1 1 1 1 Demethylmenaquinone methyltransferase OMPdecase PF00215.19 gi|154150250|ref|YP_001403868.1| - 2.9e-19 69.3 4.8 6e-19 68.3 3.3 1.5 1 1 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family ThiG PF05690.9 gi|154150250|ref|YP_001403868.1| - 0.00012 21.3 1.9 0.00017 20.7 0.7 1.7 1 1 0 1 1 1 1 Thiazole biosynthesis protein ThiG NanE PF04131.9 gi|154150250|ref|YP_001403868.1| - 0.00028 19.9 1.8 0.00057 18.9 1.2 1.5 1 0 0 1 1 1 1 Putative N-acetylmannosamine-6-phosphate epimerase His_biosynth PF00977.16 gi|154150250|ref|YP_001403868.1| - 0.00028 20.2 0.8 0.0024 17.1 0.2 2.3 1 1 1 2 2 2 1 Histidine biosynthesis protein HMGL-like PF00682.14 gi|154150250|ref|YP_001403868.1| - 0.00071 19.2 0.3 0.0043 16.7 0.1 1.8 1 1 1 2 2 2 1 HMGL-like PEP_mutase PF13714.1 gi|154150250|ref|YP_001403868.1| - 0.0019 17.4 2.3 0.11 11.6 0.0 2.5 1 1 2 3 3 3 2 Phosphoenolpyruvate phosphomutase DUF561 PF04481.7 gi|154150250|ref|YP_001403868.1| - 0.027 13.4 0.2 0.1 11.5 0.1 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF561) TMP-TENI PF02581.12 gi|154150250|ref|YP_001403868.1| - 0.062 12.4 2.8 0.091 11.8 0.1 2.3 1 1 1 2 2 2 0 Thiamine monophosphate synthase/TENI ACT PF01842.20 gi|154150251|ref|YP_001403869.1| - 1.6e-15 56.1 0.2 3.9e-07 29.4 0.0 2.5 2 1 1 3 3 3 2 ACT domain ACT_7 PF13840.1 gi|154150251|ref|YP_001403869.1| - 2.3e-09 36.6 0.3 7.9e-05 22.1 0.0 2.4 2 1 0 2 2 2 2 ACT domain ACT_4 PF13291.1 gi|154150251|ref|YP_001403869.1| - 6.2e-09 36.0 0.1 0.001 19.3 0.0 2.2 2 0 0 2 2 2 2 ACT domain ACT_6 PF13740.1 gi|154150251|ref|YP_001403869.1| - 1.5e-05 24.6 0.0 0.021 14.5 0.0 2.1 2 0 0 2 2 2 2 ACT domain DUF4350 PF14258.1 gi|154150251|ref|YP_001403869.1| - 0.1 12.8 0.0 0.19 11.9 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4350) AMP-binding_C_2 PF14535.1 gi|154150252|ref|YP_001403870.1| - 6.8e-32 109.3 0.1 2.2e-31 107.7 0.1 1.9 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.23 gi|154150252|ref|YP_001403870.1| - 2.9e-20 72.0 0.4 4.6e-20 71.3 0.0 1.5 2 0 0 2 2 2 1 AMP-binding enzyme LuxE PF04443.7 gi|154150252|ref|YP_001403870.1| - 1.2e-07 30.7 0.0 0.0011 17.6 0.0 2.2 2 0 0 2 2 2 2 Acyl-protein synthetase, LuxE AMP-binding_C_2 PF14535.1 gi|154150253|ref|YP_001403871.1| - 2.5e-31 107.5 0.1 7.8e-31 105.9 0.1 1.8 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.23 gi|154150253|ref|YP_001403871.1| - 2.3e-23 82.2 1.1 1e-22 80.1 0.8 1.8 1 1 0 1 1 1 1 AMP-binding enzyme LuxE PF04443.7 gi|154150253|ref|YP_001403871.1| - 0.0043 15.7 0.0 0.024 13.3 0.0 2.1 3 0 0 3 3 3 1 Acyl-protein synthetase, LuxE GH3 PF03321.8 gi|154150253|ref|YP_001403871.1| - 0.064 11.7 0.5 0.54 8.7 0.2 2.3 2 1 0 2 2 2 0 GH3 auxin-responsive promoter Cas_Cas1 PF01867.11 gi|154150254|ref|YP_001403872.1| - 1.2e-41 142.6 0.0 1.4e-41 142.4 0.0 1.0 1 0 0 1 1 1 1 CRISPR associated protein Cas1 Acylphosphatase PF00708.13 gi|154150255|ref|YP_001403873.1| - 1.9e-20 72.7 0.0 2.3e-20 72.5 0.0 1.1 1 0 0 1 1 1 1 Acylphosphatase TPR_14 PF13428.1 gi|154150256|ref|YP_001403874.1| - 0.0061 17.0 0.9 20 6.1 0.0 5.2 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_12 PF13424.1 gi|154150256|ref|YP_001403874.1| - 0.89 9.5 8.0 24 4.9 0.0 5.3 5 1 1 6 6 6 0 Tetratricopeptide repeat PGM_PMM_I PF02878.11 gi|154150257|ref|YP_001403875.1| - 6e-41 139.1 0.0 4e-39 133.2 0.0 2.5 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_III PF02880.11 gi|154150257|ref|YP_001403875.1| - 3.7e-23 81.7 0.0 8.3e-23 80.5 0.0 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_II PF02879.11 gi|154150257|ref|YP_001403875.1| - 5.5e-23 81.2 0.0 1.1e-22 80.2 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_IV PF00408.15 gi|154150257|ref|YP_001403875.1| - 1.1e-11 44.5 0.1 3.9e-11 42.8 0.0 1.9 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain MobB PF03205.9 gi|154150258|ref|YP_001403876.1| - 4.2e-16 58.9 0.0 4.8e-16 58.7 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B MMR_HSR1 PF01926.18 gi|154150258|ref|YP_001403876.1| - 0.021 14.7 0.1 0.03 14.2 0.1 1.4 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_29 PF13555.1 gi|154150258|ref|YP_001403876.1| - 0.025 14.0 0.2 1.1 8.8 0.0 2.2 2 0 0 2 2 2 0 P-loop containing region of AAA domain DUF463 PF04317.7 gi|154150258|ref|YP_001403876.1| - 0.033 12.7 0.0 0.042 12.4 0.0 1.1 1 0 0 1 1 1 0 YcjX-like family, DUF463 NTPase_1 PF03266.10 gi|154150258|ref|YP_001403876.1| - 0.041 13.6 0.2 0.079 12.6 0.1 1.4 1 1 0 1 1 1 0 NTPase cobW PF02492.14 gi|154150258|ref|YP_001403876.1| - 0.07 12.5 0.0 0.088 12.2 0.0 1.2 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain PRK PF00485.13 gi|154150258|ref|YP_001403876.1| - 0.089 12.3 0.0 0.14 11.7 0.0 1.5 1 1 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family DDE_Tnp_1 PF01609.16 gi|154150260|ref|YP_001403878.1| - 7.8e-05 22.3 0.0 0.00028 20.5 0.0 1.8 1 1 0 1 1 1 1 Transposase DDE domain DDE_Tnp_1 PF01609.16 gi|154150261|ref|YP_001403879.1| - 2.2e-09 37.1 0.0 3.8e-09 36.4 0.0 1.4 1 0 0 1 1 1 1 Transposase DDE domain UPF0150 PF03681.10 gi|154150262|ref|YP_001403880.1| - 4.2e-17 61.5 0.0 5.2e-17 61.2 0.0 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0150) HTH_17 PF12728.2 gi|154150263|ref|YP_001403881.1| - 1.5e-13 50.7 0.3 3.3e-13 49.6 0.1 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_23 PF13384.1 gi|154150263|ref|YP_001403881.1| - 0.00096 18.7 0.1 0.0019 17.8 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain HTH_Tnp_IS630 PF01710.11 gi|154150263|ref|YP_001403881.1| - 0.0023 17.5 0.0 0.0033 17.0 0.0 1.2 1 0 0 1 1 1 1 Transposase Sigma70_r4_2 PF08281.7 gi|154150263|ref|YP_001403881.1| - 0.0039 16.6 0.0 0.0076 15.6 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 MerR_1 PF13411.1 gi|154150263|ref|YP_001403881.1| - 0.0076 15.9 0.0 0.012 15.3 0.0 1.5 1 0 0 1 1 1 1 MerR HTH family regulatory protein Resolvase PF00239.16 gi|154150264|ref|YP_001403882.1| - 6.1e-30 103.9 0.1 9.4e-30 103.3 0.1 1.3 1 0 0 1 1 1 1 Resolvase, N terminal domain HTH_7 PF02796.10 gi|154150264|ref|YP_001403882.1| - 0.0017 18.1 0.3 0.005 16.6 0.1 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain of resolvase HTH_psq PF05225.11 gi|154150264|ref|YP_001403882.1| - 0.057 12.9 0.1 0.12 11.8 0.0 1.7 1 1 0 1 1 1 0 helix-turn-helix, Psq domain Phage_integrase PF00589.17 gi|154150265|ref|YP_001403883.1| - 8e-37 126.5 0.0 1.1e-36 126.0 0.0 1.2 1 0 0 1 1 1 1 Phage integrase family Phage_int_SAM_4 PF13495.1 gi|154150265|ref|YP_001403883.1| - 3.5e-06 27.2 2.2 3.5e-06 27.2 1.5 2.6 2 2 0 2 2 2 1 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_1 PF02899.12 gi|154150265|ref|YP_001403883.1| - 8.5e-05 22.6 5.1 0.0033 17.5 2.6 2.7 2 1 0 2 2 2 1 Phage integrase, N-terminal SAM-like domain Ion_trans_2 PF07885.11 gi|154150268|ref|YP_001403886.1| - 9.2e-17 60.5 8.1 2e-16 59.4 5.6 1.6 1 0 0 1 1 1 1 Ion channel Ion_trans PF00520.26 gi|154150268|ref|YP_001403886.1| - 0.052 12.7 6.5 0.32 10.2 3.5 2.5 2 1 0 2 2 2 0 Ion transport protein CoA_binding PF02629.14 gi|154150269|ref|YP_001403887.1| - 2.4e-21 76.0 6.1 4e-21 75.3 1.3 2.5 2 0 0 2 2 2 1 CoA binding domain Ligase_CoA PF00549.14 gi|154150269|ref|YP_001403887.1| - 3e-14 52.8 0.8 2.5e-13 49.9 0.6 2.1 1 1 0 1 1 1 1 CoA-ligase CoA_binding_2 PF13380.1 gi|154150269|ref|YP_001403887.1| - 1.2e-10 41.5 0.6 9.3e-10 38.6 0.1 2.1 2 0 0 2 2 2 1 CoA binding domain Succ_CoA_lig PF13607.1 gi|154150269|ref|YP_001403887.1| - 2.2e-08 33.7 0.0 4.6e-08 32.7 0.0 1.5 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain GFO_IDH_MocA PF01408.17 gi|154150269|ref|YP_001403887.1| - 0.0026 18.2 0.4 0.0069 16.8 0.3 1.7 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold ATP-grasp_2 PF08442.5 gi|154150270|ref|YP_001403888.1| - 4.7e-45 153.4 0.1 9.5e-45 152.4 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain Ligase_CoA PF00549.14 gi|154150270|ref|YP_001403888.1| - 3.8e-12 46.0 0.8 7.7e-12 45.0 0.5 1.5 1 0 0 1 1 1 1 CoA-ligase ATP-grasp_5 PF13549.1 gi|154150270|ref|YP_001403888.1| - 8e-10 38.3 0.9 2.3e-08 33.5 0.6 2.2 1 1 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.1 gi|154150270|ref|YP_001403888.1| - 0.0068 16.1 0.0 0.012 15.3 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.12 gi|154150270|ref|YP_001403888.1| - 0.0086 15.3 0.7 0.035 13.3 0.1 2.0 2 0 0 2 2 2 1 Carbamoyl-phosphate synthase L chain, ATP binding domain GARS_A PF01071.14 gi|154150270|ref|YP_001403888.1| - 0.0097 15.4 0.1 0.016 14.7 0.1 1.3 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Stimulus_sens_1 PF13756.1 gi|154150270|ref|YP_001403888.1| - 0.028 14.7 0.0 0.06 13.7 0.0 1.5 1 0 0 1 1 1 0 Stimulus-sensing domain POR PF01558.13 gi|154150271|ref|YP_001403889.1| - 6.5e-27 94.5 0.4 7.9e-27 94.2 0.3 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase TPP_enzyme_C PF02775.16 gi|154150272|ref|YP_001403890.1| - 4.5e-39 133.4 0.2 6.2e-39 133.0 0.1 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SecA_PP_bind PF01043.15 gi|154150272|ref|YP_001403890.1| - 0.034 14.5 0.0 0.057 13.7 0.0 1.3 1 0 0 1 1 1 0 SecA preprotein cross-linking domain DUF3366 PF11846.3 gi|154150272|ref|YP_001403890.1| - 0.052 13.4 0.0 0.071 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3366) POR_N PF01855.14 gi|154150273|ref|YP_001403891.1| - 2.3e-75 253.0 0.4 3.1e-75 252.6 0.3 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TPP_enzyme_N PF02776.13 gi|154150273|ref|YP_001403891.1| - 3.2e-05 23.4 0.7 5.7e-05 22.6 0.5 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Fer4_7 PF12838.2 gi|154150274|ref|YP_001403892.1| - 2.4e-11 43.8 8.5 1.2e-07 31.9 3.0 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.22 gi|154150274|ref|YP_001403892.1| - 9.7e-11 40.8 11.0 9.1e-07 28.2 0.9 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|154150274|ref|YP_001403892.1| - 1.1e-08 34.6 11.9 6.1e-06 25.9 4.6 2.3 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|154150274|ref|YP_001403892.1| - 1.3e-08 34.2 13.0 1.4e-06 27.8 1.4 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|154150274|ref|YP_001403892.1| - 1.9e-08 33.8 13.5 3.5e-06 26.6 1.0 3.0 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|154150274|ref|YP_001403892.1| - 5.7e-08 32.5 6.9 6.9e-05 22.6 0.7 3.0 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|154150274|ref|YP_001403892.1| - 3.1e-07 30.5 11.8 2.6e-05 24.3 9.2 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|154150274|ref|YP_001403892.1| - 1.1e-05 25.3 7.4 0.00062 19.7 2.2 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|154150274|ref|YP_001403892.1| - 8e-05 22.6 20.0 0.004 17.3 2.7 3.1 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_11 PF13247.1 gi|154150274|ref|YP_001403892.1| - 0.00011 22.0 6.1 0.00033 20.4 4.2 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|154150274|ref|YP_001403892.1| - 0.0004 21.0 13.0 0.042 14.5 1.9 2.6 1 1 2 3 3 3 3 4Fe-4S double cluster binding domain Fer4_13 PF13370.1 gi|154150274|ref|YP_001403892.1| - 0.002 18.5 7.3 0.029 14.7 0.2 3.0 3 0 0 3 3 3 1 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|154150274|ref|YP_001403892.1| - 0.0029 18.0 15.2 0.015 15.7 2.3 2.8 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_15 PF13459.1 gi|154150274|ref|YP_001403892.1| - 0.003 18.0 2.6 0.003 18.0 1.8 2.8 2 2 2 4 4 4 1 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|154150274|ref|YP_001403892.1| - 0.0052 17.1 1.2 0.0052 17.1 0.9 2.5 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|154150274|ref|YP_001403892.1| - 0.01 16.1 13.2 0.84 10.0 5.6 2.9 2 1 1 3 3 3 0 4Fe-4S dicluster domain zf-trcl PF13451.1 gi|154150274|ref|YP_001403892.1| - 1.2 8.7 4.9 0.86 9.2 0.1 2.4 2 0 0 2 2 2 0 Probable zinc-binding domain Fumerase_C PF05683.7 gi|154150275|ref|YP_001403893.1| - 2.7e-42 144.2 0.0 3.1e-42 144.0 0.0 1.0 1 0 0 1 1 1 1 Fumarase C-terminus Fumerase PF05681.9 gi|154150276|ref|YP_001403894.1| - 1.1e-88 296.8 0.0 1.2e-88 296.7 0.0 1.0 1 0 0 1 1 1 1 Fumarate hydratase (Fumerase) Ribosomal_L16 PF00252.13 gi|154150277|ref|YP_001403895.1| - 8.3e-34 116.2 0.1 1.2e-33 115.7 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e ABC_tran PF00005.22 gi|154150278|ref|YP_001403896.1| - 6.7e-31 107.4 0.0 9.7e-31 106.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|154150278|ref|YP_001403896.1| - 1.6e-10 41.4 0.0 0.00041 20.3 0.0 2.2 1 1 1 2 2 2 2 AAA domain AAA PF00004.24 gi|154150278|ref|YP_001403896.1| - 3.1e-07 30.6 0.2 2.5e-06 27.7 0.1 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.1 gi|154150278|ref|YP_001403896.1| - 2.3e-05 24.4 0.1 6.1e-05 23.0 0.1 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_15 PF13175.1 gi|154150278|ref|YP_001403896.1| - 4.9e-05 22.5 0.0 0.05 12.6 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain DUF258 PF03193.11 gi|154150278|ref|YP_001403896.1| - 5.1e-05 22.5 0.0 0.00062 18.9 0.0 2.1 2 0 0 2 2 2 1 Protein of unknown function, DUF258 SMC_N PF02463.14 gi|154150278|ref|YP_001403896.1| - 6.2e-05 22.3 0.0 0.0022 17.2 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain Arch_ATPase PF01637.13 gi|154150278|ref|YP_001403896.1| - 0.00023 20.9 0.0 0.0022 17.7 0.0 2.0 2 0 0 2 2 2 1 Archaeal ATPase AAA_22 PF13401.1 gi|154150278|ref|YP_001403896.1| - 0.0016 18.6 0.3 0.0057 16.7 0.2 2.0 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|154150278|ref|YP_001403896.1| - 0.0021 18.8 0.0 0.0047 17.7 0.0 1.7 2 0 0 2 2 1 1 AAA domain AAA_18 PF13238.1 gi|154150278|ref|YP_001403896.1| - 0.0022 18.3 0.0 0.0057 16.9 0.0 1.7 2 0 0 2 2 2 1 AAA domain NACHT PF05729.7 gi|154150278|ref|YP_001403896.1| - 0.0031 17.2 0.1 0.0092 15.6 0.0 1.8 2 0 0 2 2 2 1 NACHT domain AAA_19 PF13245.1 gi|154150278|ref|YP_001403896.1| - 0.0043 16.7 0.3 0.018 14.8 0.1 2.1 2 1 0 2 2 2 1 Part of AAA domain AAA_28 PF13521.1 gi|154150278|ref|YP_001403896.1| - 0.0049 16.8 0.9 0.016 15.1 0.2 2.0 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.1 gi|154150278|ref|YP_001403896.1| - 0.0062 16.8 0.1 0.0096 16.2 0.1 1.3 1 0 0 1 1 1 1 AAA domain Rad17 PF03215.10 gi|154150278|ref|YP_001403896.1| - 0.011 14.4 0.0 0.016 13.8 0.0 1.1 1 0 0 1 1 1 0 Rad17 cell cycle checkpoint protein AAA_14 PF13173.1 gi|154150278|ref|YP_001403896.1| - 0.018 14.9 0.0 0.04 13.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_10 PF12846.2 gi|154150278|ref|YP_001403896.1| - 0.022 14.2 0.3 0.11 11.9 0.0 2.0 2 0 0 2 2 2 0 AAA-like domain IstB_IS21 PF01695.12 gi|154150278|ref|YP_001403896.1| - 0.024 14.0 0.0 0.1 11.9 0.0 1.9 2 0 0 2 2 2 0 IstB-like ATP binding protein SbcCD_C PF13558.1 gi|154150278|ref|YP_001403896.1| - 0.037 13.9 0.1 0.13 12.2 0.0 1.9 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_5 PF07728.9 gi|154150278|ref|YP_001403896.1| - 0.039 13.6 0.1 0.12 12.1 0.0 1.8 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) NB-ARC PF00931.17 gi|154150278|ref|YP_001403896.1| - 0.042 12.7 0.0 0.094 11.5 0.0 1.5 2 0 0 2 2 2 0 NB-ARC domain AAA_24 PF13479.1 gi|154150278|ref|YP_001403896.1| - 0.043 13.3 0.3 0.2 11.1 0.0 2.0 2 0 0 2 2 2 0 AAA domain T2SE PF00437.15 gi|154150278|ref|YP_001403896.1| - 0.045 12.6 0.0 0.073 11.9 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein PduV-EutP PF10662.4 gi|154150278|ref|YP_001403896.1| - 0.056 12.9 0.0 0.11 12.0 0.0 1.4 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation ATP-synt_ab PF00006.20 gi|154150278|ref|YP_001403896.1| - 0.06 12.8 0.0 0.06 12.8 0.0 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_25 PF13481.1 gi|154150278|ref|YP_001403896.1| - 0.061 12.7 0.2 0.23 10.8 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.1 gi|154150278|ref|YP_001403896.1| - 0.082 12.4 0.2 0.28 10.7 0.0 2.0 3 0 0 3 3 1 0 P-loop containing region of AAA domain Miro PF08477.8 gi|154150278|ref|YP_001403896.1| - 0.092 13.2 0.0 0.23 11.9 0.0 1.7 2 0 0 2 2 1 0 Miro-like protein PhoH PF02562.11 gi|154150278|ref|YP_001403896.1| - 0.097 11.8 0.0 0.32 10.1 0.0 1.8 2 0 0 2 2 2 0 PhoH-like protein AAA_30 PF13604.1 gi|154150278|ref|YP_001403896.1| - 0.1 12.1 0.1 0.26 10.8 0.0 1.7 2 0 0 2 2 2 0 AAA domain Sigma54_activat PF00158.21 gi|154150278|ref|YP_001403896.1| - 0.1 12.0 0.0 0.49 9.8 0.0 2.0 2 1 1 3 3 3 0 Sigma-54 interaction domain Mg_chelatase PF01078.16 gi|154150278|ref|YP_001403896.1| - 0.11 11.6 0.0 0.2 10.8 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI RNA_helicase PF00910.17 gi|154150278|ref|YP_001403896.1| - 0.11 12.6 0.0 0.21 11.7 0.0 1.5 1 0 0 1 1 1 0 RNA helicase MMR_HSR1 PF01926.18 gi|154150278|ref|YP_001403896.1| - 0.11 12.3 0.0 0.3 11.0 0.0 1.8 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_11 PF13086.1 gi|154150278|ref|YP_001403896.1| - 0.14 11.7 0.0 0.18 11.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.1 gi|154150278|ref|YP_001403896.1| - 0.37 10.6 2.4 0.64 9.8 0.0 2.4 2 1 0 2 2 2 0 AAA domain BPD_transp_1 PF00528.17 gi|154150279|ref|YP_001403897.1| - 1e-22 80.5 14.6 1.9e-22 79.6 10.1 1.4 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component NMT1_2 PF13379.1 gi|154150280|ref|YP_001403898.1| - 4.3e-35 121.3 3.1 7.2e-18 64.8 0.0 2.6 2 1 1 3 3 3 2 NMT1-like family NMT1 PF09084.6 gi|154150280|ref|YP_001403898.1| - 6.3e-07 29.2 0.0 3.9e-05 23.3 0.0 2.9 2 1 0 2 2 2 1 NMT1/THI5 like Chloroplast_duf PF14476.1 gi|154150280|ref|YP_001403898.1| - 0.1 11.4 0.1 0.22 10.2 0.0 1.5 1 0 0 1 1 1 0 Petal formation-expressed HTH_3 PF01381.17 gi|154150281|ref|YP_001403899.1| - 1.5e-08 34.3 0.0 3.1e-08 33.3 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.2 gi|154150281|ref|YP_001403899.1| - 1.2e-06 28.4 0.1 2.2e-06 27.6 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.1 gi|154150281|ref|YP_001403899.1| - 1e-05 25.6 0.1 2e-05 24.7 0.1 1.5 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_31 PF13560.1 gi|154150281|ref|YP_001403899.1| - 0.00033 20.8 0.0 0.00072 19.6 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_psq PF05225.11 gi|154150281|ref|YP_001403899.1| - 0.023 14.2 0.4 0.28 10.7 0.0 2.4 2 0 0 2 2 2 0 helix-turn-helix, Psq domain PrpR_N PF06506.6 gi|154150281|ref|YP_001403899.1| - 0.034 13.5 0.2 0.053 12.9 0.2 1.3 1 0 0 1 1 1 0 Propionate catabolism activator TetR_N PF00440.18 gi|154150281|ref|YP_001403899.1| - 0.053 13.1 0.0 0.46 10.1 0.0 2.3 2 1 1 3 3 3 0 Bacterial regulatory proteins, tetR family HTH_24 PF13412.1 gi|154150281|ref|YP_001403899.1| - 0.079 12.3 0.3 0.24 10.7 0.0 1.9 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.1 gi|154150281|ref|YP_001403899.1| - 0.1 12.1 0.0 0.25 10.9 0.0 1.7 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain Lyase_1 PF00206.15 gi|154150282|ref|YP_001403900.1| - 2.5e-51 174.7 0.0 4e-51 174.0 0.0 1.3 1 0 0 1 1 1 1 Lyase ASL_C2 PF14698.1 gi|154150282|ref|YP_001403900.1| - 5.8e-15 55.1 0.1 1.9e-14 53.4 0.1 2.0 1 0 0 1 1 1 1 Argininosuccinate lyase C-terminal Asparaginase PF00710.15 gi|154150283|ref|YP_001403901.1| - 2.9e-88 295.7 0.8 3.4e-88 295.5 0.6 1.0 1 0 0 1 1 1 1 Asparaginase GatB_N PF02934.10 gi|154150284|ref|YP_001403902.1| - 5e-69 232.3 0.1 7.1e-69 231.8 0.1 1.2 1 0 0 1 1 1 1 GatB/GatE catalytic domain GAD PF02938.9 gi|154150284|ref|YP_001403902.1| - 8.2e-17 61.1 0.0 4.8e-15 55.4 0.0 2.7 2 0 0 2 2 2 1 GAD domain GatB_Yqey PF02637.13 gi|154150284|ref|YP_001403902.1| - 1e-11 44.7 0.4 4.7e-11 42.6 0.3 2.1 1 1 0 1 1 1 1 GatB domain YqeY PF09424.5 gi|154150284|ref|YP_001403902.1| - 5e-05 23.1 0.6 5e-05 23.1 0.4 2.3 3 0 0 3 3 3 1 Yqey-like protein Nab2 PF11517.3 gi|154150284|ref|YP_001403902.1| - 0.022 14.8 0.0 1.9 8.5 0.0 2.7 2 0 0 2 2 2 0 Nuclear abundant poly(A) RNA-bind protein 2 (Nab2) DUF1254 PF06863.7 gi|154150287|ref|YP_001403905.1| - 6.8e-31 106.7 0.6 1.3e-29 102.6 0.3 2.5 2 1 0 2 2 2 1 Protein of unknown function (DUF1254) DUF1214 PF06742.6 gi|154150287|ref|YP_001403905.1| - 4.5e-23 81.6 0.4 4.5e-23 81.6 0.3 2.4 2 1 1 3 3 3 1 Protein of unknown function (DUF1214) RhodobacterPufX PF11511.3 gi|154150288|ref|YP_001403906.1| - 0.13 11.6 0.1 0.28 10.6 0.1 1.5 1 0 0 1 1 1 0 Intrinsic membrane protein PufX YopE_N PF09020.5 gi|154150288|ref|YP_001403906.1| - 0.19 11.7 1.6 0.21 11.6 0.3 1.6 1 1 0 1 1 1 0 YopE, N terminal PEGA PF08308.6 gi|154150289|ref|YP_001403907.1| - 1.5e-13 50.2 0.8 2.4e-05 24.0 0.0 3.2 2 1 0 2 2 2 2 PEGA domain CarboxypepD_reg PF13620.1 gi|154150289|ref|YP_001403907.1| - 1e-08 35.1 7.0 3.5e-05 23.7 1.1 2.8 2 1 0 2 2 2 2 Carboxypeptidase regulatory-like domain DUF4480 PF13715.1 gi|154150289|ref|YP_001403907.1| - 0.0047 16.9 0.1 3.1 7.9 0.1 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF4480) PBP-Tp47_c PF14888.1 gi|154150289|ref|YP_001403907.1| - 0.14 11.7 1.8 0.79 9.3 0.2 2.1 2 0 0 2 2 2 0 Penicillin-binding protein Tp47 domain C DUF307 PF03733.8 gi|154150289|ref|YP_001403907.1| - 0.21 12.0 0.5 0.21 12.0 0.4 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF307) GtrA PF04138.9 gi|154150290|ref|YP_001403908.1| - 1.9e-25 89.0 15.9 2.3e-25 88.8 11.0 1.1 1 0 0 1 1 1 1 GtrA-like protein Pex24p PF06398.6 gi|154150290|ref|YP_001403908.1| - 0.16 10.7 3.0 0.21 10.3 2.1 1.2 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin PMT_2 PF13231.1 gi|154150291|ref|YP_001403909.1| - 9.2e-31 106.8 19.5 9.2e-31 106.8 13.5 3.0 2 0 0 2 2 2 1 Dolichyl-phosphate-mannose-protein mannosyltransferase DUF2723 PF11028.3 gi|154150291|ref|YP_001403909.1| - 0.03 13.8 13.5 0.017 14.6 5.9 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2723) FHA PF00498.21 gi|154150292|ref|YP_001403910.1| - 2.6e-11 43.4 0.0 4.6e-11 42.6 0.0 1.4 1 0 0 1 1 1 1 FHA domain HTH_20 PF12840.2 gi|154150292|ref|YP_001403910.1| - 5.3e-08 32.5 0.0 9.8e-08 31.6 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_45 PF14947.1 gi|154150292|ref|YP_001403910.1| - 1.1e-06 28.3 0.0 2.6e-06 27.1 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_5 PF01022.15 gi|154150292|ref|YP_001403910.1| - 5.2e-06 26.0 0.2 1.6e-05 24.4 0.0 1.9 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family MarR PF01047.17 gi|154150292|ref|YP_001403910.1| - 0.00011 21.8 0.0 0.00059 19.4 0.0 2.1 2 0 0 2 2 2 1 MarR family TrmB PF01978.14 gi|154150292|ref|YP_001403910.1| - 0.00059 19.4 0.0 0.0013 18.3 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.1 gi|154150292|ref|YP_001403910.1| - 0.0018 18.5 0.0 0.0048 17.1 0.0 1.7 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_24 PF13412.1 gi|154150292|ref|YP_001403910.1| - 0.0027 17.0 0.1 0.0051 16.1 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.5 gi|154150292|ref|YP_001403910.1| - 0.0029 17.1 0.0 0.0053 16.3 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain DUF4423 PF14394.1 gi|154150292|ref|YP_001403910.1| - 0.02 14.4 0.1 0.037 13.5 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4423) Rrf2 PF02082.15 gi|154150292|ref|YP_001403910.1| - 0.028 14.5 0.2 0.068 13.2 0.0 1.7 2 0 0 2 2 2 0 Transcriptional regulator HTH_34 PF13601.1 gi|154150292|ref|YP_001403910.1| - 0.042 13.8 0.0 0.088 12.8 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF2250 PF10007.4 gi|154150292|ref|YP_001403910.1| - 0.055 13.3 0.0 0.093 12.6 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) Pkinase PF00069.20 gi|154150293|ref|YP_001403911.1| - 4.6e-39 134.1 0.0 6.6e-39 133.6 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain NosD PF05048.8 gi|154150293|ref|YP_001403911.1| - 1e-25 90.2 9.3 1.6e-25 89.6 6.5 1.3 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Pkinase_Tyr PF07714.12 gi|154150293|ref|YP_001403911.1| - 2.5e-24 85.7 0.0 3.4e-24 85.3 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Beta_helix PF13229.1 gi|154150293|ref|YP_001403911.1| - 4.7e-08 32.9 15.6 9.7e-08 31.9 10.8 1.5 1 0 0 1 1 1 1 Right handed beta helix region APH PF01636.18 gi|154150293|ref|YP_001403911.1| - 0.005 16.6 0.0 0.0084 15.8 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family Kinase-like PF14531.1 gi|154150293|ref|YP_001403911.1| - 0.0054 15.7 0.0 0.57 9.0 0.0 2.2 2 0 0 2 2 2 2 Kinase-like PKD PF00801.15 gi|154150296|ref|YP_001403914.1| - 6e-82 269.3 80.5 2.2e-17 62.5 7.8 5.9 5 0 0 5 5 5 5 PKD domain Y_Y_Y PF07495.8 gi|154150296|ref|YP_001403914.1| - 0.0057 16.3 13.9 1.1 9.0 0.9 5.2 5 0 0 5 5 5 1 Y_Y_Y domain DUF1834 PF08873.6 gi|154150296|ref|YP_001403914.1| - 2.1 7.8 8.0 52 3.3 0.1 4.5 4 1 0 5 5 5 0 Domain of unknown function (DUF1834) Cadherin PF00028.12 gi|154150296|ref|YP_001403914.1| - 5.6 7.2 21.7 19 5.6 0.1 6.7 7 1 0 8 8 8 0 Cadherin domain MacB_PCD PF12704.2 gi|154150298|ref|YP_001403916.1| - 1e-30 107.0 7.1 1e-30 107.0 4.9 2.3 2 0 0 2 2 2 1 MacB-like periplasmic core domain FtsX PF02687.16 gi|154150298|ref|YP_001403916.1| - 6.5e-21 74.3 14.8 1.7e-20 72.9 7.5 2.2 2 0 0 2 2 2 1 FtsX-like permease family DUF4134 PF13572.1 gi|154150298|ref|YP_001403916.1| - 0.045 13.8 0.1 0.045 13.8 0.1 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4134) Trp_oprn_chp PF09534.5 gi|154150298|ref|YP_001403916.1| - 0.55 9.8 4.2 1.8 8.1 0.1 2.6 3 0 0 3 3 3 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) ABC_tran PF00005.22 gi|154150299|ref|YP_001403917.1| - 6.3e-32 110.7 0.0 8.3e-32 110.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|154150299|ref|YP_001403917.1| - 1.2e-09 38.6 0.0 2.7e-06 27.5 0.0 2.2 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|154150299|ref|YP_001403917.1| - 7.3e-08 31.9 0.1 0.0036 16.5 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_15 PF13175.1 gi|154150299|ref|YP_001403917.1| - 1.4e-06 27.6 0.0 0.00065 18.8 0.0 2.1 1 1 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.1 gi|154150299|ref|YP_001403917.1| - 3.6e-05 23.1 0.0 9e-05 21.9 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF258 PF03193.11 gi|154150299|ref|YP_001403917.1| - 0.00037 19.7 0.0 0.0006 19.0 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_17 PF13207.1 gi|154150299|ref|YP_001403917.1| - 0.00081 20.2 0.0 0.0014 19.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.1 gi|154150299|ref|YP_001403917.1| - 0.00096 19.2 0.0 0.022 14.8 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_10 PF12846.2 gi|154150299|ref|YP_001403917.1| - 0.0015 18.0 0.1 0.0065 15.9 0.0 1.9 2 0 0 2 2 2 1 AAA-like domain AAA_14 PF13173.1 gi|154150299|ref|YP_001403917.1| - 0.0017 18.2 0.0 0.012 15.4 0.0 2.2 2 0 0 2 2 2 1 AAA domain Rad17 PF03215.10 gi|154150299|ref|YP_001403917.1| - 0.0041 15.8 0.0 0.0048 15.6 0.0 1.1 1 0 0 1 1 1 1 Rad17 cell cycle checkpoint protein MutS_V PF00488.16 gi|154150299|ref|YP_001403917.1| - 0.0045 16.4 0.0 0.0071 15.7 0.0 1.3 1 0 0 1 1 1 1 MutS domain V MMR_HSR1 PF01926.18 gi|154150299|ref|YP_001403917.1| - 0.0069 16.3 0.1 0.012 15.5 0.0 1.6 1 1 0 1 1 1 1 50S ribosome-binding GTPase FtsK_SpoIIIE PF01580.13 gi|154150299|ref|YP_001403917.1| - 0.0086 15.5 0.0 0.02 14.3 0.0 1.6 2 0 0 2 2 2 1 FtsK/SpoIIIE family AAA_28 PF13521.1 gi|154150299|ref|YP_001403917.1| - 0.0092 15.9 0.0 0.18 11.7 0.0 2.3 2 0 0 2 2 2 1 AAA domain Arch_ATPase PF01637.13 gi|154150299|ref|YP_001403917.1| - 0.013 15.2 0.0 0.03 14.0 0.0 1.7 2 0 0 2 2 2 0 Archaeal ATPase AAA_18 PF13238.1 gi|154150299|ref|YP_001403917.1| - 0.014 15.7 0.0 0.057 13.7 0.0 2.0 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.17 gi|154150299|ref|YP_001403917.1| - 0.016 15.3 0.0 0.074 13.2 0.0 2.0 2 0 0 2 2 2 0 RNA helicase AAA_30 PF13604.1 gi|154150299|ref|YP_001403917.1| - 0.018 14.5 0.0 0.049 13.1 0.0 1.7 2 1 0 2 2 2 0 AAA domain AAA_23 PF13476.1 gi|154150299|ref|YP_001403917.1| - 0.018 15.3 0.1 0.042 14.1 0.0 1.5 2 0 0 2 2 1 0 AAA domain RNA12 PF10443.4 gi|154150299|ref|YP_001403917.1| - 0.019 13.5 0.0 0.046 12.2 0.0 1.6 1 1 1 2 2 2 0 RNA12 protein AAA_16 PF13191.1 gi|154150299|ref|YP_001403917.1| - 0.019 14.9 0.0 0.022 14.7 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain NB-ARC PF00931.17 gi|154150299|ref|YP_001403917.1| - 0.033 13.0 0.0 0.061 12.1 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain AAA_33 PF13671.1 gi|154150299|ref|YP_001403917.1| - 0.04 13.7 0.3 0.056 13.3 0.2 1.7 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.1 gi|154150299|ref|YP_001403917.1| - 0.04 13.3 0.0 0.092 12.1 0.0 1.6 2 0 0 2 2 2 0 AAA domain G-alpha PF00503.15 gi|154150299|ref|YP_001403917.1| - 0.15 10.7 0.0 0.15 10.7 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit ATP_bind_1 PF03029.12 gi|154150299|ref|YP_001403917.1| - 0.15 11.5 0.0 0.39 10.2 0.0 1.7 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein SbcCD_C PF13558.1 gi|154150299|ref|YP_001403917.1| - 0.15 11.9 0.0 1.3 8.9 0.0 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit CARDB PF07705.6 gi|154150300|ref|YP_001403918.1| - 0.015 15.3 15.7 0.26 11.3 0.4 4.0 3 2 1 4 4 4 0 CARDB Mut7-C PF01927.11 gi|154150301|ref|YP_001403919.1| - 8.3e-36 123.1 0.0 9.4e-36 122.9 0.0 1.0 1 0 0 1 1 1 1 Mut7-C RNAse domain Radical_SAM PF04055.16 gi|154150302|ref|YP_001403920.1| - 2.1e-16 60.5 0.0 4.1e-16 59.6 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|154150302|ref|YP_001403920.1| - 0.0025 17.9 0.0 0.006 16.6 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain zf-ribbon_3 PF13248.1 gi|154150302|ref|YP_001403920.1| - 0.0044 16.1 0.2 0.0044 16.1 0.1 2.6 2 1 0 2 2 2 1 zinc-ribbon domain zf-C4_Topoisom PF01396.14 gi|154150302|ref|YP_001403920.1| - 0.031 13.7 4.0 0.18 11.3 0.0 3.0 3 0 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger zinc_ribbon_2 PF13240.1 gi|154150302|ref|YP_001403920.1| - 0.045 13.2 8.7 6 6.4 0.0 4.8 5 0 0 5 5 5 0 zinc-ribbon domain RNA_POL_M_15KD PF02150.11 gi|154150302|ref|YP_001403920.1| - 0.048 13.3 0.2 0.048 13.3 0.1 2.6 3 0 0 3 3 3 0 RNA polymerases M/15 Kd subunit DZR PF12773.2 gi|154150302|ref|YP_001403920.1| - 0.087 12.6 0.5 0.087 12.6 0.4 3.6 4 1 0 4 4 4 0 Double zinc ribbon TF_Zn_Ribbon PF08271.7 gi|154150302|ref|YP_001403920.1| - 0.37 10.1 3.2 4.1 6.8 0.0 3.1 3 0 0 3 3 3 0 TFIIB zinc-binding Zn-ribbon_8 PF09723.5 gi|154150302|ref|YP_001403920.1| - 3.6 7.6 9.7 25 4.9 0.1 4.0 4 0 0 4 4 4 0 Zinc ribbon domain Zn_Tnp_IS1595 PF12760.2 gi|154150302|ref|YP_001403920.1| - 8 6.3 16.0 0.78 9.5 0.7 3.6 3 1 1 4 4 4 0 Transposase zinc-ribbon domain AA_kinase PF00696.23 gi|154150303|ref|YP_001403921.1| - 8e-25 87.7 3.7 1.1e-24 87.3 2.6 1.2 1 0 0 1 1 1 1 Amino acid kinase family TMP-TENI PF02581.12 gi|154150303|ref|YP_001403921.1| - 0.011 14.9 0.3 1.1 8.3 0.0 2.5 3 0 0 3 3 3 0 Thiamine monophosphate synthase/TENI Mur_ligase_C PF02875.16 gi|154150303|ref|YP_001403921.1| - 0.092 12.7 0.1 5.6 7.0 0.0 2.7 2 1 1 3 3 3 0 Mur ligase family, glutamate ligase domain HhH-GPD PF00730.20 gi|154150304|ref|YP_001403922.1| - 2.2e-21 76.1 0.0 4.3e-21 75.2 0.0 1.5 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.18 gi|154150304|ref|YP_001403922.1| - 4.8e-09 35.4 0.0 1.3e-08 34.0 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif EndIII_4Fe-2S PF10576.4 gi|154150304|ref|YP_001403922.1| - 0.00034 20.6 3.2 0.00061 19.8 2.2 1.4 1 0 0 1 1 1 1 Iron-sulfur binding domain of endonuclease III HHH_5 PF14520.1 gi|154150304|ref|YP_001403922.1| - 0.0014 18.8 0.0 0.023 14.8 0.0 2.4 2 1 0 2 2 2 1 Helix-hairpin-helix domain Zn_clus PF00172.13 gi|154150304|ref|YP_001403922.1| - 0.1 12.4 1.4 0.17 11.8 1.0 1.3 1 0 0 1 1 1 0 Fungal Zn(2)-Cys(6) binuclear cluster domain PHO4 PF01384.15 gi|154150305|ref|YP_001403923.1| - 3e-97 325.2 41.6 3.6e-97 324.9 28.9 1.1 1 0 0 1 1 1 1 Phosphate transporter family DUF2208 PF09973.4 gi|154150305|ref|YP_001403923.1| - 1.7 7.8 3.6 3.4 6.8 2.5 1.5 1 0 0 1 1 1 0 Predicted membrane protein (DUF2208) PhoU_div PF01865.11 gi|154150306|ref|YP_001403924.1| - 1.1e-17 63.9 8.2 1.4e-17 63.5 5.7 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF47 PhoU PF01895.14 gi|154150306|ref|YP_001403924.1| - 0.055 13.9 6.4 0.3 11.5 1.5 2.6 1 1 2 3 3 3 0 PhoU domain HTH_40 PF14493.1 gi|154150306|ref|YP_001403924.1| - 0.087 13.0 0.7 0.49 10.6 0.1 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain PHO4 PF01384.15 gi|154150307|ref|YP_001403925.1| - 3.8e-82 275.5 56.6 7.4e-59 199.0 16.3 2.0 2 0 0 2 2 2 2 Phosphate transporter family DUF962 PF06127.6 gi|154150307|ref|YP_001403925.1| - 0.72 9.7 5.0 0.9 9.4 0.7 3.1 1 1 1 3 3 3 0 Protein of unknown function (DUF962) Caveolin PF01146.12 gi|154150307|ref|YP_001403925.1| - 0.89 9.1 4.7 0.25 10.9 0.7 2.0 2 0 0 2 2 2 0 Caveolin PhoU_div PF01865.11 gi|154150308|ref|YP_001403926.1| - 4.5e-13 48.8 2.1 5.5e-13 48.5 1.4 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF47 HAMP PF00672.20 gi|154150308|ref|YP_001403926.1| - 0.046 13.9 0.2 0.14 12.3 0.0 1.9 2 1 0 2 2 2 0 HAMP domain DUF3734 PF12536.3 gi|154150308|ref|YP_001403926.1| - 0.095 12.8 0.1 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 Patatin phospholipase QRPTase_C PF01729.14 gi|154150309|ref|YP_001403927.1| - 7.1e-24 84.2 0.0 1e-23 83.7 0.0 1.2 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.11 gi|154150309|ref|YP_001403927.1| - 5.2e-09 35.8 0.0 1.4e-08 34.4 0.0 1.7 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain PNP_UDP_1 PF01048.15 gi|154150310|ref|YP_001403928.1| - 4.2e-26 91.3 1.2 4.9e-26 91.1 0.8 1.1 1 0 0 1 1 1 1 Phosphorylase superfamily MR_MLE_C PF13378.1 gi|154150310|ref|YP_001403928.1| - 0.05 13.5 0.2 0.088 12.7 0.1 1.4 1 0 0 1 1 1 0 Enolase C-terminal domain-like Amidohydro_1 PF01979.15 gi|154150311|ref|YP_001403929.1| - 2.5e-54 185.1 0.3 3.1e-54 184.8 0.2 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_4 PF13147.1 gi|154150311|ref|YP_001403929.1| - 1.8e-11 44.5 9.1 7.5e-11 42.5 6.3 2.0 1 1 0 1 1 1 1 Amidohydrolase Amidohydro_3 PF07969.6 gi|154150311|ref|YP_001403929.1| - 3e-08 33.3 0.3 9.7e-08 31.6 0.0 1.9 2 0 0 2 2 2 1 Amidohydrolase family Amidohydro_5 PF13594.1 gi|154150311|ref|YP_001403929.1| - 1.3e-05 24.9 0.0 5.2e-05 22.9 0.0 2.1 1 0 0 1 1 1 1 Amidohydrolase A_deaminase PF00962.17 gi|154150311|ref|YP_001403929.1| - 5.8e-05 22.1 0.0 9.5e-05 21.4 0.0 1.2 1 0 0 1 1 1 1 Adenosine/AMP deaminase MFS_1 PF07690.11 gi|154150312|ref|YP_001403930.1| - 9.9e-60 202.0 48.5 9.9e-60 202.0 33.6 2.1 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|154150312|ref|YP_001403930.1| - 3.4e-10 39.0 38.2 1.5e-09 36.9 11.7 2.6 2 0 0 2 2 2 2 Sugar (and other) transporter MFS_3 PF05977.8 gi|154150312|ref|YP_001403930.1| - 4.7e-08 31.6 7.1 4.7e-08 31.6 4.9 2.2 2 0 0 2 2 2 1 Transmembrane secretion effector MFS_2 PF13347.1 gi|154150312|ref|YP_001403930.1| - 7e-08 31.2 44.8 1.4e-06 27.0 11.5 3.3 1 1 1 3 3 3 3 MFS/sugar transport protein MFS_1_like PF12832.2 gi|154150312|ref|YP_001403930.1| - 0.0009 18.9 0.0 0.0009 18.9 0.0 3.4 3 1 0 4 4 4 1 MFS_1 like family AMP-binding PF00501.23 gi|154150313|ref|YP_001403931.1| - 6.3e-103 344.3 0.1 7.5e-103 344.1 0.1 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|154150313|ref|YP_001403931.1| - 2.3e-13 50.8 0.6 5.5e-13 49.6 0.1 2.0 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain AMP-binding_C_2 PF14535.1 gi|154150313|ref|YP_001403931.1| - 0.011 15.8 0.0 0.022 14.8 0.0 1.5 1 0 0 1 1 1 0 AMP-binding enzyme C-terminal domain PhzC-PhzF PF02567.11 gi|154150314|ref|YP_001403932.1| - 6.2e-60 202.7 0.0 8.9e-60 202.2 0.0 1.2 1 0 0 1 1 1 1 Phenazine biosynthesis-like protein Fae PF08714.6 gi|154150315|ref|YP_001403933.1| - 1.2e-65 220.0 0.6 2.2e-65 219.2 0.1 1.7 2 0 0 2 2 2 1 Formaldehyde-activating enzyme (Fae) OMPdecase PF00215.19 gi|154150315|ref|YP_001403933.1| - 1.4e-24 86.7 3.8 2.9e-24 85.7 2.6 1.6 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family PcrB PF01884.12 gi|154150315|ref|YP_001403933.1| - 0.00015 21.0 1.8 0.015 14.5 0.1 2.3 2 0 0 2 2 2 2 PcrB family QRPTase_C PF01729.14 gi|154150315|ref|YP_001403933.1| - 0.00085 18.8 0.7 0.0019 17.7 0.5 1.6 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain Ribul_P_3_epim PF00834.14 gi|154150315|ref|YP_001403933.1| - 0.0016 17.6 2.0 0.017 14.2 1.4 2.3 1 1 0 1 1 1 1 Ribulose-phosphate 3 epimerase family DSHCT PF08148.7 gi|154150315|ref|YP_001403933.1| - 0.12 11.6 0.0 0.2 10.8 0.0 1.5 1 0 0 1 1 1 0 DSHCT (NUC185) domain FMN_dh PF01070.13 gi|154150315|ref|YP_001403933.1| - 0.33 9.7 3.7 1.1 8.0 2.6 1.8 1 1 0 1 1 1 0 FMN-dependent dehydrogenase Spidroin_MaSp PF11260.3 gi|154150317|ref|YP_001403935.1| - 0.057 13.4 0.3 0.083 12.9 0.2 1.2 1 0 0 1 1 1 0 Major ampullate spidroin 1 and 2 Abhydrolase_6 PF12697.2 gi|154150320|ref|YP_001403938.1| - 3.5e-19 69.6 0.0 5.2e-19 69.0 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.15 gi|154150320|ref|YP_001403938.1| - 2.7e-14 53.2 0.3 3.1e-10 39.9 0.1 2.1 1 1 1 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_5 PF12695.2 gi|154150320|ref|YP_001403938.1| - 3.2e-12 46.4 0.2 6.4e-12 45.4 0.1 1.5 1 1 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.3 gi|154150320|ref|YP_001403938.1| - 0.0005 19.8 0.0 0.00084 19.1 0.0 1.4 1 0 0 1 1 1 1 Putative lysophospholipase COesterase PF00135.23 gi|154150321|ref|YP_001403939.1| - 1.7e-126 423.1 0.1 2.1e-126 422.7 0.0 1.1 1 0 0 1 1 1 1 Carboxylesterase family Abhydrolase_3 PF07859.8 gi|154150321|ref|YP_001403939.1| - 5.8e-07 29.2 0.8 4.6e-06 26.3 0.6 2.0 1 1 0 1 1 1 1 alpha/beta hydrolase fold Peptidase_S9 PF00326.16 gi|154150321|ref|YP_001403939.1| - 0.00037 19.7 0.0 0.0007 18.8 0.0 1.4 1 0 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_5 PF12695.2 gi|154150321|ref|YP_001403939.1| - 0.002 17.8 0.8 0.0055 16.4 0.5 1.9 1 1 0 1 1 1 1 Alpha/beta hydrolase family PepSY PF03413.14 gi|154150322|ref|YP_001403940.1| - 1.2e-07 32.2 5.3 0.01 16.4 0.0 4.2 3 1 0 3 3 3 2 Peptidase propeptide and YPEB domain Lactamase_B PF00753.22 gi|154150323|ref|YP_001403941.1| - 4.8e-28 98.1 1.6 5.7e-28 97.8 1.1 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|154150323|ref|YP_001403941.1| - 6.1e-06 25.9 0.0 1e-05 25.1 0.0 1.3 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.1 gi|154150323|ref|YP_001403941.1| - 0.095 12.4 0.0 0.13 11.9 0.0 1.3 1 0 0 1 1 1 0 Beta-lactamase superfamily domain PEMT PF04191.8 gi|154150324|ref|YP_001403942.1| - 1e-19 70.5 1.5 1e-19 70.5 1.0 2.7 3 0 0 3 3 3 1 Phospholipid methyltransferase ICMT PF04140.9 gi|154150324|ref|YP_001403942.1| - 3.5e-12 46.3 0.5 3.5e-12 46.3 0.3 1.8 3 0 0 3 3 3 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family ERG4_ERG24 PF01222.12 gi|154150324|ref|YP_001403942.1| - 0.00032 19.3 2.3 0.00099 17.7 0.0 2.0 2 0 0 2 2 2 1 Ergosterol biosynthesis ERG4/ERG24 family Steroid_dh PF02544.11 gi|154150324|ref|YP_001403942.1| - 0.029 14.1 4.9 0.0096 15.6 1.1 2.1 1 1 0 1 1 1 0 3-oxo-5-alpha-steroid 4-dehydrogenase Cytomega_TRL10 PF06084.6 gi|154150324|ref|YP_001403942.1| - 0.12 12.1 0.1 0.24 11.2 0.1 1.5 1 0 0 1 1 1 0 Cytomegalovirus TRL10 protein OAD_gamma PF04277.8 gi|154150324|ref|YP_001403942.1| - 0.18 12.2 2.8 0.64 10.4 0.2 2.7 3 0 0 3 3 3 0 Oxaloacetate decarboxylase, gamma chain MHYT PF03707.11 gi|154150324|ref|YP_001403942.1| - 0.2 11.8 0.1 0.2 11.8 0.1 2.9 4 0 0 4 4 4 0 Bacterial signalling protein N terminal repeat MLANA PF14991.1 gi|154150324|ref|YP_001403942.1| - 0.2 11.6 0.2 0.2 11.6 0.2 1.9 2 0 0 2 2 2 0 Protein melan-A MIG-14_Wnt-bd PF06664.7 gi|154150324|ref|YP_001403942.1| - 0.53 9.0 6.7 1.9 7.2 2.1 2.2 2 0 0 2 2 2 0 Wnt-binding factor required for Wnt secretion RDD PF06271.7 gi|154150324|ref|YP_001403942.1| - 0.79 9.6 14.9 1.2 9.0 5.3 2.2 2 0 0 2 2 2 0 RDD family Tic20 PF09685.5 gi|154150324|ref|YP_001403942.1| - 1.1 9.3 19.2 0.82 9.6 0.4 2.8 2 1 0 2 2 2 0 Tic20-like protein PetG PF02529.10 gi|154150324|ref|YP_001403942.1| - 3.2 7.3 9.2 2 7.9 0.6 3.2 3 0 0 3 3 3 0 Cytochrome B6-F complex subunit 5 SBP_bac_3 PF00497.15 gi|154150325|ref|YP_001403943.1| - 5.7e-38 130.4 0.0 1.3e-37 129.2 0.0 1.6 2 0 0 2 2 2 1 Bacterial extracellular solute-binding proteins, family 3 PAS_9 PF13426.1 gi|154150325|ref|YP_001403943.1| - 7.7e-14 51.9 0.0 2.9e-13 50.0 0.0 2.1 1 0 0 1 1 1 1 PAS domain PAS PF00989.19 gi|154150325|ref|YP_001403943.1| - 2.8e-09 36.7 0.0 1.3e-08 34.5 0.0 2.1 2 0 0 2 2 2 1 PAS fold HATPase_c PF02518.21 gi|154150325|ref|YP_001403943.1| - 2.4e-08 33.6 0.0 6.1e-08 32.3 0.0 1.7 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_4 PF08448.5 gi|154150325|ref|YP_001403943.1| - 7.1e-05 22.8 0.0 0.00018 21.4 0.0 1.8 1 0 0 1 1 1 1 PAS fold PAS_3 PF08447.6 gi|154150325|ref|YP_001403943.1| - 0.00061 19.8 0.0 0.0018 18.3 0.0 1.9 1 0 0 1 1 1 1 PAS fold PAS_8 PF13188.1 gi|154150325|ref|YP_001403943.1| - 0.0052 16.5 0.0 0.019 14.8 0.0 2.0 1 0 0 1 1 1 1 PAS domain NicO PF03824.11 gi|154150325|ref|YP_001403943.1| - 0.14 11.4 0.0 0.27 10.4 0.0 1.4 1 0 0 1 1 1 0 High-affinity nickel-transport protein DUF3353 PF11833.3 gi|154150326|ref|YP_001403944.1| - 0.6 9.5 4.1 0.71 9.3 2.5 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF3353) Chitin_synth_2 PF03142.10 gi|154150326|ref|YP_001403944.1| - 6.1 5.1 9.1 6.9 4.9 6.3 1.1 1 0 0 1 1 1 0 Chitin synthase Acetyltransf_10 PF13673.1 gi|154150327|ref|YP_001403945.1| - 3.2e-10 40.1 0.0 4.3e-10 39.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|154150327|ref|YP_001403945.1| - 3.3e-09 36.6 0.0 5.8e-09 35.8 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|154150327|ref|YP_001403945.1| - 7.4e-09 35.6 0.0 1.7e-08 34.4 0.0 1.6 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|154150327|ref|YP_001403945.1| - 0.00062 19.7 0.0 0.0007 19.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|154150327|ref|YP_001403945.1| - 0.014 15.0 0.0 0.037 13.7 0.0 1.7 1 1 1 2 2 2 0 FR47-like protein Acetyltransf_CG PF14542.1 gi|154150327|ref|YP_001403945.1| - 0.15 12.0 0.0 0.24 11.3 0.0 1.4 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase SdpI PF13630.1 gi|154150329|ref|YP_001403947.1| - 0.011 15.3 1.5 0.015 15.0 0.9 1.4 1 1 0 1 1 1 0 SdpI/YhfL protein family 7TM_GPCR_Srb PF02175.11 gi|154150329|ref|YP_001403947.1| - 0.03 13.8 0.6 0.035 13.6 0.4 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srb DUF2627 PF11118.3 gi|154150329|ref|YP_001403947.1| - 0.031 14.3 0.0 0.051 13.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2627) GlpM PF06942.7 gi|154150329|ref|YP_001403947.1| - 0.57 10.4 4.1 1.2 9.4 2.7 1.7 1 1 1 2 2 2 0 GlpM protein PEGA PF08308.6 gi|154150330|ref|YP_001403948.1| - 3.9e-47 157.9 26.6 5.8e-15 54.8 0.4 5.4 5 0 0 5 5 5 4 PEGA domain PKD PF00801.15 gi|154150330|ref|YP_001403948.1| - 2e-14 53.1 7.4 2e-14 53.1 5.1 4.3 4 0 0 4 4 4 1 PKD domain CarboxypepD_reg PF13620.1 gi|154150330|ref|YP_001403948.1| - 1.2e-08 34.9 28.7 0.005 16.8 0.3 6.3 5 1 1 6 6 6 3 Carboxypeptidase regulatory-like domain fn3_3 PF14686.1 gi|154150330|ref|YP_001403948.1| - 8.6e-05 22.5 10.7 0.053 13.6 0.1 4.1 3 1 1 4 4 4 2 Polysaccharide lyase family 4, domain II DUF4399 PF14347.1 gi|154150330|ref|YP_001403948.1| - 0.00027 20.8 0.9 1.7 8.6 0.0 4.1 3 1 1 4 4 4 1 Domain of unknown function (DUF4399) Y_Y_Y PF07495.8 gi|154150330|ref|YP_001403948.1| - 0.0014 18.3 8.7 4.3 7.1 0.1 4.5 4 0 0 4 4 4 2 Y_Y_Y domain Big_1 PF02369.11 gi|154150330|ref|YP_001403948.1| - 0.0028 17.5 20.3 0.14 12.0 0.2 5.8 5 1 1 6 6 6 2 Bacterial Ig-like domain (group 1) PapC_N PF13954.1 gi|154150330|ref|YP_001403948.1| - 0.017 14.6 0.3 0.87 9.1 0.0 3.3 4 1 1 5 5 5 0 PapC N-terminal domain Wzt_C PF14524.1 gi|154150330|ref|YP_001403948.1| - 0.35 10.5 3.9 24 4.6 0.0 3.8 3 1 0 4 4 4 0 Wzt C-terminal domain Cupin_2 PF07883.6 gi|154150331|ref|YP_001403949.1| - 2.3e-10 39.8 0.0 5.2e-10 38.6 0.0 1.6 2 0 0 2 2 2 1 Cupin domain AraC_binding PF02311.14 gi|154150331|ref|YP_001403949.1| - 3.3e-06 26.8 0.0 4.4e-06 26.4 0.0 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_6 PF12852.2 gi|154150331|ref|YP_001403949.1| - 0.0013 18.4 0.0 0.0016 18.1 0.0 1.1 1 0 0 1 1 1 1 Cupin EutQ PF06249.7 gi|154150331|ref|YP_001403949.1| - 0.003 17.0 0.0 0.0031 17.0 0.0 1.2 1 0 0 1 1 1 1 Ethanolamine utilisation protein EutQ AraC_binding_2 PF14525.1 gi|154150331|ref|YP_001403949.1| - 0.0077 15.8 0.0 0.0084 15.6 0.0 1.1 1 0 0 1 1 1 1 AraC-binding-like domain ARD PF03079.9 gi|154150331|ref|YP_001403949.1| - 0.029 14.2 0.0 0.031 14.2 0.0 1.1 1 0 0 1 1 1 0 ARD/ARD' family DUF1498 PF07385.7 gi|154150331|ref|YP_001403949.1| - 0.14 11.2 0.0 0.14 11.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1498) E1-E2_ATPase PF00122.15 gi|154150332|ref|YP_001403950.1| - 1.7e-57 194.1 5.0 1.7e-57 194.1 3.5 2.1 2 0 0 2 2 2 1 E1-E2 ATPase Hydrolase PF00702.21 gi|154150332|ref|YP_001403950.1| - 2.3e-49 168.6 8.3 2.3e-49 168.6 5.7 2.4 3 0 0 3 3 3 1 haloacid dehalogenase-like hydrolase HMA PF00403.21 gi|154150332|ref|YP_001403950.1| - 7.4e-32 109.2 0.8 1.7e-15 56.8 0.6 2.9 2 0 0 2 2 2 2 Heavy-metal-associated domain HAD PF12710.2 gi|154150332|ref|YP_001403950.1| - 8.9e-15 55.3 0.0 2e-14 54.2 0.0 1.6 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|154150332|ref|YP_001403950.1| - 5e-05 23.0 0.6 0.0041 16.7 0.1 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase DUF59 PF01883.14 gi|154150332|ref|YP_001403950.1| - 0.029 14.3 2.6 0.66 10.0 0.1 3.4 2 0 0 2 2 2 0 Domain of unknown function DUF59 PMSR PF01625.16 gi|154150332|ref|YP_001403950.1| - 0.074 12.9 0.1 11 5.9 0.0 2.3 2 0 0 2 2 2 0 Peptide methionine sulfoxide reductase DUF4342 PF14242.1 gi|154150332|ref|YP_001403950.1| - 0.89 9.3 7.8 2.6 7.8 0.7 3.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4342) YHS PF04945.8 gi|154150333|ref|YP_001403951.1| - 4.7e-18 64.7 1.3 5e-18 64.6 0.9 1.0 1 0 0 1 1 1 1 YHS domain zf-FCS PF06467.9 gi|154150333|ref|YP_001403951.1| - 0.0061 16.1 0.3 0.0074 15.9 0.2 1.2 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif ATPase-cat_bd PF12156.3 gi|154150333|ref|YP_001403951.1| - 0.0088 16.5 0.2 0.01 16.3 0.1 1.1 1 0 0 1 1 1 1 Putative metal-binding domain of cation transport ATPase Arc_trans_TRASH PF08394.5 gi|154150333|ref|YP_001403951.1| - 0.017 15.2 1.6 0.022 14.8 1.1 1.4 1 1 0 1 1 1 0 Archaeal TRASH domain DUF2179 PF10035.4 gi|154150334|ref|YP_001403952.1| - 6.8e-11 41.6 0.0 1.1e-10 40.9 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2179) DoxD PF04173.8 gi|154150334|ref|YP_001403952.1| - 0.00027 20.6 4.1 0.00038 20.1 2.9 1.3 1 0 0 1 1 1 1 TQO small subunit DoxD TPR_11 PF13414.1 gi|154150336|ref|YP_001403954.1| - 1.5e-28 98.1 17.3 4.5e-15 55.0 0.2 2.8 1 1 2 3 3 3 3 TPR repeat TPR_1 PF00515.23 gi|154150336|ref|YP_001403954.1| - 4.8e-21 73.4 7.3 1.9e-05 24.0 0.0 4.1 4 0 0 4 4 4 4 Tetratricopeptide repeat TPR_2 PF07719.12 gi|154150336|ref|YP_001403954.1| - 1.9e-18 64.8 9.3 0.00012 21.7 0.0 4.1 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_16 PF13432.1 gi|154150336|ref|YP_001403954.1| - 2e-15 56.9 8.0 2.4e-06 28.0 0.4 3.0 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_17 PF13431.1 gi|154150336|ref|YP_001403954.1| - 4.3e-13 48.3 3.1 0.0011 18.9 0.1 3.8 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_9 PF13371.1 gi|154150336|ref|YP_001403954.1| - 2e-12 46.7 1.0 9.7e-08 31.7 0.2 2.1 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_19 PF14559.1 gi|154150336|ref|YP_001403954.1| - 1.6e-10 41.1 6.4 3.5e-07 30.4 0.7 3.0 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_14 PF13428.1 gi|154150336|ref|YP_001403954.1| - 1.9e-09 37.3 9.3 0.00097 19.5 0.3 3.8 1 1 3 4 4 4 3 Tetratricopeptide repeat TPR_12 PF13424.1 gi|154150336|ref|YP_001403954.1| - 6e-08 32.5 8.6 0.0065 16.3 0.1 3.1 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_8 PF13181.1 gi|154150336|ref|YP_001403954.1| - 3.5e-06 26.4 3.4 0.011 15.4 0.1 4.0 4 0 0 4 4 4 1 Tetratricopeptide repeat Apc3 PF12895.2 gi|154150336|ref|YP_001403954.1| - 1.2e-05 25.3 5.3 0.00027 21.0 0.7 2.1 1 1 0 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.1 gi|154150336|ref|YP_001403954.1| - 0.00064 19.3 4.8 0.29 11.0 0.1 3.5 4 0 0 4 4 3 1 Tetratricopeptide repeat Alkyl_sulf_dimr PF14863.1 gi|154150336|ref|YP_001403954.1| - 0.0024 18.0 1.4 0.4 10.9 0.0 2.3 1 1 1 2 2 2 1 Alkyl sulfatase dimerisation TPR_6 PF13174.1 gi|154150336|ref|YP_001403954.1| - 0.0027 18.0 5.3 0.17 12.3 0.2 3.6 4 0 0 4 4 4 1 Tetratricopeptide repeat PPTA PF01239.17 gi|154150336|ref|YP_001403954.1| - 0.0065 15.7 0.1 1.1 8.7 0.0 2.8 3 0 0 3 3 3 1 Protein prenyltransferase alpha subunit repeat Fis1_TPR_C PF14853.1 gi|154150336|ref|YP_001403954.1| - 0.01 15.7 0.7 2.2 8.2 0.1 2.6 2 0 0 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat TPR_15 PF13429.1 gi|154150336|ref|YP_001403954.1| - 0.023 13.7 3.8 3.1 6.7 0.0 2.8 1 1 2 3 3 3 0 Tetratricopeptide repeat DUF3856 PF12968.2 gi|154150336|ref|YP_001403954.1| - 0.055 13.2 3.2 4.7 7.0 0.7 3.2 1 1 1 2 2 2 0 Domain of Unknown Function (DUF3856) BTAD PF03704.12 gi|154150336|ref|YP_001403954.1| - 0.061 13.6 2.5 0.099 12.9 1.2 1.8 2 1 0 2 2 2 0 Bacterial transcriptional activator domain MIT PF04212.13 gi|154150336|ref|YP_001403954.1| - 0.32 10.9 5.9 6.9 6.6 0.1 3.1 2 1 0 3 3 3 0 MIT (microtubule interacting and transport) domain Ferritin PF00210.19 gi|154150337|ref|YP_001403955.1| - 2.7e-42 143.8 2.3 3.1e-42 143.7 1.6 1.0 1 0 0 1 1 1 1 Ferritin-like domain Rubrerythrin PF02915.12 gi|154150337|ref|YP_001403955.1| - 0.0092 16.3 1.7 0.03 14.6 1.2 1.8 1 1 0 1 1 1 1 Rubrerythrin TPR_11 PF13414.1 gi|154150338|ref|YP_001403956.1| - 1e-24 85.9 6.5 3.3e-15 55.4 0.6 3.1 3 0 0 3 3 3 2 TPR repeat Response_reg PF00072.19 gi|154150338|ref|YP_001403956.1| - 8e-21 74.1 0.1 2.9e-20 72.3 0.0 1.9 2 0 0 2 2 2 1 Response regulator receiver domain TPR_1 PF00515.23 gi|154150338|ref|YP_001403956.1| - 1.2e-20 72.1 8.2 8.7e-07 28.2 0.1 4.8 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_16 PF13432.1 gi|154150338|ref|YP_001403956.1| - 2.7e-19 69.3 5.1 1.4e-11 44.7 1.1 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.12 gi|154150338|ref|YP_001403956.1| - 7.7e-19 66.0 5.7 3.4e-06 26.5 0.3 4.6 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_12 PF13424.1 gi|154150338|ref|YP_001403956.1| - 8.5e-16 57.6 4.5 3e-08 33.4 0.4 2.9 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_17 PF13431.1 gi|154150338|ref|YP_001403956.1| - 1.4e-13 49.8 4.1 0.00019 21.3 0.0 5.1 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_19 PF14559.1 gi|154150338|ref|YP_001403956.1| - 3.6e-12 46.4 1.5 2.1e-07 31.1 0.1 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.1 gi|154150338|ref|YP_001403956.1| - 6.9e-12 44.8 6.8 0.00018 21.8 0.1 4.1 2 1 2 4 4 4 3 Tetratricopeptide repeat TPR_9 PF13371.1 gi|154150338|ref|YP_001403956.1| - 2.9e-11 43.0 4.9 3.7e-09 36.2 0.7 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_8 PF13181.1 gi|154150338|ref|YP_001403956.1| - 1e-10 40.6 6.1 0.0051 16.4 0.2 4.6 5 0 0 5 5 4 3 Tetratricopeptide repeat PAS_9 PF13426.1 gi|154150338|ref|YP_001403956.1| - 1.6e-09 38.0 0.0 6.5e-08 32.8 0.0 3.0 2 1 0 2 2 2 1 PAS domain PAS_4 PF08448.5 gi|154150338|ref|YP_001403956.1| - 7e-07 29.2 0.0 2.2e-05 24.4 0.0 2.5 1 1 0 1 1 1 1 PAS fold PAS PF00989.19 gi|154150338|ref|YP_001403956.1| - 9.1e-07 28.6 0.0 0.0016 18.2 0.0 2.7 2 0 0 2 2 2 2 PAS fold TPR_6 PF13174.1 gi|154150338|ref|YP_001403956.1| - 6.3e-06 26.3 0.9 0.1 13.0 0.1 4.1 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_7 PF13176.1 gi|154150338|ref|YP_001403956.1| - 0.0017 17.9 4.0 0.033 13.9 0.2 3.9 4 0 0 4 4 4 1 Tetratricopeptide repeat Apc3 PF12895.2 gi|154150338|ref|YP_001403956.1| - 0.0022 18.0 0.6 0.011 15.7 0.1 2.2 2 0 0 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_10 PF13374.1 gi|154150338|ref|YP_001403956.1| - 0.0048 16.7 8.3 0.49 10.3 0.0 4.3 5 0 0 5 5 5 1 Tetratricopeptide repeat Coatomer_E PF04733.9 gi|154150338|ref|YP_001403956.1| - 0.02 14.0 0.0 1.7 7.7 0.0 2.2 1 1 1 2 2 2 0 Coatomer epsilon subunit Fis1_TPR_C PF14853.1 gi|154150338|ref|YP_001403956.1| - 0.048 13.5 0.3 0.27 11.1 0.1 2.4 2 0 0 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat PPTA PF01239.17 gi|154150338|ref|YP_001403956.1| - 0.078 12.3 1.9 1.5 8.3 0.0 3.2 3 0 0 3 3 3 0 Protein prenyltransferase alpha subunit repeat DUF362 PF04015.7 gi|154150339|ref|YP_001403957.1| - 4.3e-29 101.4 0.0 7.7e-29 100.6 0.0 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF362) Fer4_10 PF13237.1 gi|154150339|ref|YP_001403957.1| - 1.3e-12 47.3 20.5 1.1e-08 34.7 7.9 2.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.22 gi|154150339|ref|YP_001403957.1| - 2.2e-12 45.9 14.9 2.1e-06 27.0 2.3 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|154150339|ref|YP_001403957.1| - 2.2e-12 46.2 16.3 1.2e-07 31.2 2.3 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|154150339|ref|YP_001403957.1| - 9.5e-11 41.7 23.1 9e-09 35.4 8.4 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|154150339|ref|YP_001403957.1| - 1.1e-10 41.7 11.9 2.3e-10 40.6 8.3 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|154150339|ref|YP_001403957.1| - 2e-09 37.1 34.2 6.8e-07 29.0 9.2 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|154150339|ref|YP_001403957.1| - 2.5e-09 37.7 6.7 0.00018 22.1 1.5 2.5 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.2 gi|154150339|ref|YP_001403957.1| - 1.1e-06 28.2 17.7 0.00074 19.2 2.0 2.8 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|154150339|ref|YP_001403957.1| - 1.5e-06 28.0 34.5 2.5e-05 24.2 8.9 2.3 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|154150339|ref|YP_001403957.1| - 4.2e-06 26.6 11.2 0.0036 17.5 2.4 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_11 PF13247.1 gi|154150339|ref|YP_001403957.1| - 3.4e-05 23.6 3.8 6.1e-05 22.8 2.6 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|154150339|ref|YP_001403957.1| - 4e-05 24.0 9.5 0.0025 18.3 0.9 2.8 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|154150339|ref|YP_001403957.1| - 4.1e-05 23.8 18.9 0.021 15.3 3.7 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|154150339|ref|YP_001403957.1| - 0.00011 22.5 10.1 0.018 15.3 1.1 2.5 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|154150339|ref|YP_001403957.1| - 0.00019 21.7 15.3 0.021 15.2 2.8 2.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain DUF2088 PF09861.4 gi|154150339|ref|YP_001403957.1| - 0.0059 15.6 0.3 0.011 14.8 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF2088) Fer4_13 PF13370.1 gi|154150339|ref|YP_001403957.1| - 0.64 10.4 12.8 2.4 8.6 1.5 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain META PF03724.11 gi|154150341|ref|YP_001403959.1| - 5e-53 177.1 0.4 3.5e-27 94.2 0.1 2.1 2 0 0 2 2 2 2 META domain Inh PF02974.9 gi|154150341|ref|YP_001403959.1| - 0.00098 18.6 0.0 7 6.3 0.0 3.5 3 0 0 3 3 3 3 Protease inhibitor Inh SMP_2 PF10144.4 gi|154150342|ref|YP_001403960.1| - 0.045 12.8 0.1 0.047 12.8 0.0 1.1 1 0 0 1 1 1 0 Bacterial virulence factor haemolysin DUF1220 PF06758.8 gi|154150342|ref|YP_001403960.1| - 0.28 11.0 1.4 0.46 10.3 1.0 1.3 1 0 0 1 1 1 0 Repeat of unknown function (DUF1220) YcfA PF07927.7 gi|154150344|ref|YP_001403962.1| - 1.6e-16 59.9 0.1 1.8e-16 59.7 0.1 1.0 1 0 0 1 1 1 1 YcfA-like protein UPF0150 PF03681.10 gi|154150345|ref|YP_001403963.1| - 6.7e-14 51.2 0.0 9e-14 50.8 0.0 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0150) DUF1902 PF08972.6 gi|154150345|ref|YP_001403963.1| - 0.079 12.5 0.0 0.13 11.8 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1902) CitMHS PF03600.11 gi|154150346|ref|YP_001403964.1| - 1e-32 113.1 39.3 3.2e-32 111.4 20.2 2.0 2 0 0 2 2 2 2 Citrate transporter RibD_C PF01872.12 gi|154150347|ref|YP_001403965.1| - 4.8e-51 173.2 0.1 5.4e-51 173.0 0.1 1.0 1 0 0 1 1 1 1 RibD C-terminal domain Na_H_Exchanger PF00999.16 gi|154150348|ref|YP_001403966.1| - 7.5e-72 241.9 53.2 1.1e-71 241.3 36.8 1.2 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.13 gi|154150348|ref|YP_001403966.1| - 4.3e-23 81.5 0.5 9e-23 80.4 0.3 1.6 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.16 gi|154150348|ref|YP_001403966.1| - 7.8e-11 41.4 0.1 1.9e-10 40.1 0.0 1.7 1 0 0 1 1 1 1 TrkA-C domain TPR_12 PF13424.1 gi|154150348|ref|YP_001403966.1| - 0.17 11.8 0.2 0.35 10.8 0.1 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat Na_H_Exchanger PF00999.16 gi|154150349|ref|YP_001403967.1| - 1.5e-72 244.2 56.8 2e-72 243.8 39.3 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family TrkA_N PF02254.13 gi|154150349|ref|YP_001403967.1| - 1.3e-20 73.5 1.4 2.4e-20 72.6 1.0 1.4 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.16 gi|154150349|ref|YP_001403967.1| - 5.9e-14 51.4 0.0 1.6e-13 49.9 0.0 1.8 1 0 0 1 1 1 1 TrkA-C domain AlaDh_PNT_C PF01262.16 gi|154150349|ref|YP_001403967.1| - 0.042 13.4 0.0 0.11 12.1 0.0 1.6 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain DHHA1 PF02272.14 gi|154150351|ref|YP_001403969.1| - 9.8e-05 21.9 0.2 0.00023 20.7 0.1 1.6 1 0 0 1 1 1 1 DHHA1 domain DHH PF01368.15 gi|154150351|ref|YP_001403969.1| - 0.038 13.6 0.1 0.21 11.2 0.0 2.1 2 1 0 2 2 2 0 DHH family DUF308 PF03729.8 gi|154150353|ref|YP_001403971.1| - 1.7e-11 43.9 60.1 1.6e-06 28.0 13.5 3.1 1 1 2 3 3 3 3 Short repeat of unknown function (DUF308) UPF0147 PF03685.8 gi|154150354|ref|YP_001403972.1| - 1.9e-34 117.3 1.2 2e-34 117.2 0.8 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0147) Auto_anti-p27 PF06677.7 gi|154150355|ref|YP_001403973.1| - 9.1e-15 54.1 5.5 1.7e-14 53.2 3.8 1.5 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Cys_rich_CPCC PF14206.1 gi|154150355|ref|YP_001403973.1| - 0.016 14.7 1.6 0.053 13.0 0.5 2.1 2 0 0 2 2 2 0 Cysteine-rich CPCC DUF2072 PF09845.4 gi|154150355|ref|YP_001403973.1| - 0.027 14.3 1.0 0.027 14.3 0.7 1.8 1 1 1 2 2 2 0 Zn-ribbon containing protein (DUF2072) ERCC4 PF02732.10 gi|154150356|ref|YP_001403974.1| - 2.4e-21 75.9 0.0 7.5e-21 74.3 0.0 1.9 2 0 0 2 2 2 1 ERCC4 domain Helicase_C PF00271.26 gi|154150356|ref|YP_001403974.1| - 3.1e-20 71.7 0.0 1.3e-19 69.8 0.0 2.2 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.24 gi|154150356|ref|YP_001403974.1| - 2.8e-18 65.9 0.0 9.2e-18 64.3 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase ResIII PF04851.10 gi|154150356|ref|YP_001403974.1| - 6.6e-15 55.4 0.0 1.4e-14 54.3 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit HHH_2 PF12826.2 gi|154150356|ref|YP_001403974.1| - 1.2e-09 37.9 0.0 4e-09 36.2 0.0 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.1 gi|154150356|ref|YP_001403974.1| - 1.4e-08 34.7 0.0 5.5e-08 32.8 0.0 2.1 1 0 0 1 1 1 1 Helix-hairpin-helix domain HHH PF00633.18 gi|154150356|ref|YP_001403974.1| - 4.8e-08 32.2 0.2 1.5e-07 30.7 0.1 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix motif PhoH PF02562.11 gi|154150356|ref|YP_001403974.1| - 0.047 12.9 0.0 0.11 11.7 0.0 1.7 1 0 0 1 1 1 0 PhoH-like protein Helicase_RecD PF05127.9 gi|154150356|ref|YP_001403974.1| - 0.056 13.0 0.0 1.8 8.1 0.0 2.4 2 0 0 2 2 2 0 Helicase 5_3_exonuc PF01367.15 gi|154150356|ref|YP_001403974.1| - 0.063 13.5 1.4 1.1 9.5 0.0 2.9 2 1 1 3 3 3 0 5'-3' exonuclease, C-terminal SAM fold tRNA-synt_2b PF00587.20 gi|154150357|ref|YP_001403975.1| - 6.7e-60 201.5 0.1 9.6e-60 201.0 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.15 gi|154150357|ref|YP_001403975.1| - 5e-21 74.4 0.0 1e-20 73.4 0.0 1.6 1 0 0 1 1 1 1 Anticodon binding domain DUF2769 PF10967.3 gi|154150357|ref|YP_001403975.1| - 0.015 15.6 2.9 0.033 14.4 2.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2769) HTH_23 PF13384.1 gi|154150358|ref|YP_001403976.1| - 5.6e-07 29.0 0.0 0.00048 19.6 0.0 2.8 3 0 0 3 3 2 1 Homeodomain-like domain GerE PF00196.14 gi|154150358|ref|YP_001403976.1| - 8.1e-07 28.2 0.0 6.2e-05 22.2 0.0 2.5 2 0 0 2 2 2 1 Bacterial regulatory proteins, luxR family MerR PF00376.18 gi|154150358|ref|YP_001403976.1| - 0.00041 19.8 0.0 0.00083 18.8 0.0 1.5 1 0 0 1 1 1 1 MerR family regulatory protein HTH_28 PF13518.1 gi|154150358|ref|YP_001403976.1| - 0.00043 20.2 0.0 0.0032 17.4 0.0 2.5 4 0 0 4 4 3 1 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.1 gi|154150358|ref|YP_001403976.1| - 0.00092 18.3 0.0 0.012 14.8 0.0 2.5 3 0 0 3 3 3 1 Helix-turn-helix domain of transposase family ISL3 HTH_38 PF13936.1 gi|154150358|ref|YP_001403976.1| - 0.00092 18.7 0.0 0.06 12.9 0.0 2.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_3 PF01381.17 gi|154150358|ref|YP_001403976.1| - 0.0016 18.2 0.0 0.0063 16.3 0.0 2.1 1 0 0 1 1 1 1 Helix-turn-helix HTH_24 PF13412.1 gi|154150358|ref|YP_001403976.1| - 0.0019 17.5 0.1 0.064 12.6 0.0 2.5 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_10 PF04967.7 gi|154150358|ref|YP_001403976.1| - 0.002 17.6 0.1 0.06 12.9 0.0 2.8 4 0 0 4 4 2 1 HTH DNA binding domain Sigma70_r3 PF04539.11 gi|154150358|ref|YP_001403976.1| - 0.0023 17.7 1.8 0.61 10.0 0.1 3.0 3 0 0 3 3 3 1 Sigma-70 region 3 Sigma70_r4 PF04545.11 gi|154150358|ref|YP_001403976.1| - 0.0029 16.8 0.2 0.69 9.2 0.0 3.3 3 0 0 3 3 3 1 Sigma-70, region 4 HTH_Tnp_1 PF01527.15 gi|154150358|ref|YP_001403976.1| - 0.0048 16.8 0.0 0.019 14.9 0.0 2.0 2 0 0 2 2 2 1 Transposase MerR_1 PF13411.1 gi|154150358|ref|YP_001403976.1| - 0.0057 16.4 0.0 0.012 15.3 0.0 1.5 1 0 0 1 1 1 1 MerR HTH family regulatory protein HTH_Mga PF08280.6 gi|154150358|ref|YP_001403976.1| - 0.0075 16.0 0.1 0.79 9.5 0.0 2.5 2 0 0 2 2 2 1 M protein trans-acting positive regulator (MGA) HTH domain Sigma70_r4_2 PF08281.7 gi|154150358|ref|YP_001403976.1| - 0.0078 15.6 0.1 0.38 10.2 0.0 2.6 2 0 0 2 2 2 1 Sigma-70, region 4 EcoR124_C PF12008.3 gi|154150358|ref|YP_001403976.1| - 0.0099 15.0 0.2 0.59 9.2 0.1 2.0 1 1 1 2 2 2 1 Type I restriction and modification enzyme - subunit R C terminal HTH_8 PF02954.14 gi|154150358|ref|YP_001403976.1| - 0.011 15.2 0.0 0.073 12.6 0.0 2.4 2 0 0 2 2 2 0 Bacterial regulatory protein, Fis family HTH_17 PF12728.2 gi|154150358|ref|YP_001403976.1| - 0.012 15.8 0.0 0.029 14.6 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Tnp_1_2 PF13022.1 gi|154150358|ref|YP_001403976.1| - 0.035 13.8 0.1 0.18 11.5 0.0 2.3 2 1 0 2 2 2 0 Helix-turn-helix of insertion element transposase HTH_29 PF13551.1 gi|154150358|ref|YP_001403976.1| - 0.051 13.7 0.1 0.15 12.2 0.0 1.9 2 0 0 2 2 2 0 Winged helix-turn helix HTH_7 PF02796.10 gi|154150358|ref|YP_001403976.1| - 0.062 13.1 0.0 0.25 11.2 0.0 2.0 2 0 0 2 2 1 0 Helix-turn-helix domain of resolvase HTH_AraC PF00165.18 gi|154150358|ref|YP_001403976.1| - 0.069 12.9 0.0 0.15 11.9 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_19 PF12844.2 gi|154150358|ref|YP_001403976.1| - 0.074 13.1 0.0 0.19 11.7 0.0 1.9 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_AsnC-type PF13404.1 gi|154150358|ref|YP_001403976.1| - 0.083 12.4 0.8 2.2 7.9 0.0 2.8 2 1 0 2 2 2 0 AsnC-type helix-turn-helix domain DUF2922 PF11148.3 gi|154150358|ref|YP_001403976.1| - 0.097 12.3 1.2 0.23 11.1 0.0 2.2 3 0 0 3 3 2 0 Protein of unknown function (DUF2922) TetR_N PF00440.18 gi|154150358|ref|YP_001403976.1| - 0.13 11.9 0.0 1.9 8.1 0.0 2.6 3 0 0 3 3 3 0 Bacterial regulatory proteins, tetR family DUF4319 PF14203.1 gi|154150358|ref|YP_001403976.1| - 4.2 6.9 7.3 1.2 8.7 0.1 3.0 3 2 2 5 5 4 0 Domain of unknown function (DUF4319) Lactamase_B_3 PF13483.1 gi|154150359|ref|YP_001403977.1| - 7.6e-29 100.5 0.0 9.2e-29 100.2 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.2 gi|154150359|ref|YP_001403977.1| - 3.4e-20 72.4 0.0 4.3e-20 72.0 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|154150359|ref|YP_001403977.1| - 5.6e-09 35.9 5.8 1.3e-08 34.7 4.0 1.6 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily RNB PF00773.14 gi|154150360|ref|YP_001403978.1| - 1.5e-64 218.3 0.0 1.8e-64 218.1 0.0 1.1 1 0 0 1 1 1 1 RNB domain S1 PF00575.18 gi|154150360|ref|YP_001403978.1| - 0.0015 18.6 0.1 0.039 14.0 0.1 2.6 1 1 0 1 1 1 1 S1 RNA binding domain PKD PF00801.15 gi|154150361|ref|YP_001403979.1| - 8.4e-74 243.2 80.2 5.2e-17 61.3 7.7 5.8 6 0 0 6 6 6 5 PKD domain Cadherin PF00028.12 gi|154150361|ref|YP_001403979.1| - 0.19 12.0 12.6 72 3.7 0.1 6.6 6 1 0 7 7 7 0 Cadherin domain tRNA-synt_1g PF09334.6 gi|154150363|ref|YP_001403981.1| - 2.6e-142 474.1 0.0 3.2e-142 473.8 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA_bind PF01588.15 gi|154150363|ref|YP_001403981.1| - 1.1e-26 92.4 0.0 2.1e-26 91.5 0.0 1.5 1 0 0 1 1 1 1 Putative tRNA binding domain tRNA-synt_1 PF00133.17 gi|154150363|ref|YP_001403981.1| - 2.2e-23 82.1 0.1 9.6e-11 40.3 0.0 4.0 2 2 0 3 3 3 3 tRNA synthetases class I (I, L, M and V) tRNA-synt_1e PF01406.14 gi|154150363|ref|YP_001403981.1| - 6.7e-13 48.4 0.0 1.6e-09 37.3 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain Anticodon_1 PF08264.8 gi|154150363|ref|YP_001403981.1| - 8.2e-13 48.3 0.0 1.3e-12 47.6 0.0 1.4 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1d PF00750.14 gi|154150363|ref|YP_001403981.1| - 0.0059 15.4 0.0 0.89 8.2 0.0 2.4 1 1 1 2 2 2 2 tRNA synthetases class I (R) zinc_ribbon_2 PF13240.1 gi|154150363|ref|YP_001403981.1| - 0.013 14.9 11.5 0.044 13.2 2.5 2.8 2 0 0 2 2 2 0 zinc-ribbon domain DZR PF12773.2 gi|154150363|ref|YP_001403981.1| - 0.098 12.4 9.8 0.44 10.4 2.3 2.4 1 1 1 2 2 2 0 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|154150363|ref|YP_001403981.1| - 0.1 11.8 13.3 1.8 7.8 0.5 3.2 2 1 2 4 4 4 0 zinc-ribbon domain zinc-ribbons_6 PF07191.7 gi|154150363|ref|YP_001403981.1| - 1.2 8.9 5.9 3.7 7.4 4.1 1.8 1 0 0 1 1 1 0 zinc-ribbons Cript PF10235.4 gi|154150363|ref|YP_001403981.1| - 6 7.2 7.3 6.5 7.1 1.7 2.5 1 1 0 2 2 2 0 Microtubule-associated protein CRIPT PAS_4 PF08448.5 gi|154150364|ref|YP_001403982.1| - 3.4e-13 49.5 0.0 2.6e-12 46.7 0.0 2.4 3 0 0 3 3 3 1 PAS fold HAMP PF00672.20 gi|154150364|ref|YP_001403982.1| - 8.7e-11 41.8 0.0 8.7e-11 41.8 0.0 2.1 2 0 0 2 2 2 1 HAMP domain PAS_9 PF13426.1 gi|154150364|ref|YP_001403982.1| - 1.2e-10 41.6 0.0 3e-09 37.1 0.0 2.9 3 0 0 3 3 3 1 PAS domain PAS PF00989.19 gi|154150364|ref|YP_001403982.1| - 6.5e-08 32.3 0.0 2.9e-07 30.2 0.0 2.1 2 0 0 2 2 2 1 PAS fold PAS_8 PF13188.1 gi|154150364|ref|YP_001403982.1| - 7.5e-06 25.6 0.0 6.8e-05 22.5 0.0 2.5 2 0 0 2 2 2 1 PAS domain HATPase_c PF02518.21 gi|154150364|ref|YP_001403982.1| - 0.0043 16.7 0.0 0.011 15.4 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF3149 PF11346.3 gi|154150364|ref|YP_001403982.1| - 0.085 12.4 0.5 0.44 10.1 0.8 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3149) PAS_3 PF08447.6 gi|154150364|ref|YP_001403982.1| - 0.089 12.8 0.1 0.38 10.8 0.0 2.1 2 0 0 2 2 2 0 PAS fold HEAT_2 PF13646.1 gi|154150365|ref|YP_001403983.1| - 2.9e-38 130.0 6.5 5.9e-15 55.3 0.3 3.0 1 1 2 3 3 3 3 HEAT repeats HEAT PF02985.17 gi|154150365|ref|YP_001403983.1| - 1.1e-22 78.0 1.0 0.0013 18.6 0.0 6.0 6 0 0 6 6 6 5 HEAT repeat HEAT_PBS PF03130.11 gi|154150365|ref|YP_001403983.1| - 1.4e-19 68.5 7.4 0.0005 20.2 0.1 5.4 5 0 0 5 5 5 4 PBS lyase HEAT-like repeat HEAT_EZ PF13513.1 gi|154150365|ref|YP_001403983.1| - 2.7e-17 62.6 5.8 0.002 18.5 0.0 5.5 5 1 1 6 6 6 5 HEAT-like repeat Arm PF00514.18 gi|154150365|ref|YP_001403983.1| - 1.9e-06 27.4 0.0 0.74 9.7 0.0 4.7 3 1 2 5 5 5 2 Armadillo/beta-catenin-like repeat Vac14_Fab1_bd PF12755.2 gi|154150365|ref|YP_001403983.1| - 3.9e-06 27.1 0.0 1.9 8.9 0.0 4.7 1 1 3 5 5 5 2 Vacuolar 14 Fab1-binding region Cnd1 PF12717.2 gi|154150365|ref|YP_001403983.1| - 0.0018 18.1 0.1 13 5.5 0.0 4.1 3 2 1 4 4 4 1 non-SMC mitotic condensation complex subunit 1 Aconitase_B_N PF11791.3 gi|154150365|ref|YP_001403983.1| - 0.0085 15.9 0.1 5.6 6.7 0.0 2.9 1 1 1 3 3 3 1 Aconitate B N-terminal domain DUF4042 PF13251.1 gi|154150365|ref|YP_001403983.1| - 0.12 11.8 0.2 57 3.0 0.0 3.6 2 1 0 3 3 3 0 Domain of unknown function (DUF4042) DUF2411 PF10304.4 gi|154150365|ref|YP_001403983.1| - 0.17 11.5 0.4 24 4.5 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF2411) ALF PF03752.8 gi|154150365|ref|YP_001403983.1| - 5.2 7.0 8.5 19 5.2 0.0 3.5 3 1 1 4 4 4 0 Short repeats of unknown function zinc_ribbon_2 PF13240.1 gi|154150366|ref|YP_001403984.1| - 7e-06 25.3 6.4 1.2e-05 24.5 4.4 1.4 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.2 gi|154150366|ref|YP_001403984.1| - 4.9e-05 23.0 0.7 8.8e-05 22.2 0.5 1.3 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|154150366|ref|YP_001403984.1| - 0.00044 19.3 5.2 0.0008 18.5 3.6 1.4 1 0 0 1 1 1 1 zinc-ribbon domain bPH_3 PF14470.1 gi|154150366|ref|YP_001403984.1| - 0.026 14.8 0.0 0.061 13.5 0.0 1.6 1 0 0 1 1 1 0 Bacterial PH domain Vps36_ESCRT-II PF11605.3 gi|154150366|ref|YP_001403984.1| - 0.064 13.0 0.2 2.5 7.9 0.0 2.7 2 1 0 2 2 2 0 Vacuolar protein sorting protein 36 Vps36 Nudix_N_2 PF14803.1 gi|154150366|ref|YP_001403984.1| - 0.092 12.4 3.5 6.8 6.4 0.1 2.8 2 0 0 2 2 2 0 Nudix N-terminal zf-dskA_traR PF01258.12 gi|154150366|ref|YP_001403984.1| - 0.28 10.9 1.7 4.5 7.1 0.1 2.5 1 1 1 2 2 2 0 Prokaryotic dksA/traR C4-type zinc finger UPF0547 PF10571.4 gi|154150366|ref|YP_001403984.1| - 0.67 9.6 3.1 1.5 8.5 2.1 1.5 1 0 0 1 1 1 0 Uncharacterised protein family UPF0547 DUF2116 PF09889.4 gi|154150366|ref|YP_001403984.1| - 0.76 9.6 6.0 7.6 6.4 0.8 2.4 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) CxxCxxCC PF03692.10 gi|154150368|ref|YP_001403986.1| - 0.015 15.7 0.1 0.022 15.2 0.1 1.3 1 0 0 1 1 1 0 Putative zinc- or iron-chelating domain AIRS_C PF02769.17 gi|154150369|ref|YP_001403987.1| - 2.4e-19 69.8 0.2 4.4e-19 68.9 0.1 1.5 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.19 gi|154150369|ref|YP_001403987.1| - 6.1e-12 45.6 0.7 1.8e-11 44.0 0.5 1.8 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain Abhydrolase_6 PF12697.2 gi|154150370|ref|YP_001403988.1| - 3e-24 86.1 0.3 1.3e-22 80.8 0.2 2.1 1 1 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.15 gi|154150370|ref|YP_001403988.1| - 5.1e-12 45.8 0.0 2.4e-11 43.6 0.0 1.8 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_5 PF12695.2 gi|154150370|ref|YP_001403988.1| - 1.7e-10 40.8 0.0 5.7e-10 39.1 0.0 1.8 1 1 0 1 1 1 1 Alpha/beta hydrolase family DLH PF01738.13 gi|154150370|ref|YP_001403988.1| - 0.00017 20.9 0.0 0.094 11.9 0.0 2.2 2 0 0 2 2 2 2 Dienelactone hydrolase family Peptidase_S15 PF02129.13 gi|154150370|ref|YP_001403988.1| - 0.0079 15.6 0.0 0.013 14.9 0.0 1.2 1 0 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) Abhydrolase_8 PF06259.7 gi|154150370|ref|YP_001403988.1| - 0.018 14.5 0.0 0.029 13.8 0.0 1.3 1 0 0 1 1 1 0 Alpha/beta hydrolase Thioesterase PF00975.15 gi|154150370|ref|YP_001403988.1| - 0.042 14.0 0.0 0.058 13.6 0.0 1.3 1 0 0 1 1 1 0 Thioesterase domain DUF726 PF05277.7 gi|154150370|ref|YP_001403988.1| - 0.084 11.7 0.0 0.12 11.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF726) DUF2920 PF11144.3 gi|154150370|ref|YP_001403988.1| - 0.19 10.6 0.0 0.28 10.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2920) AF-4 PF05110.8 gi|154150371|ref|YP_001403989.1| - 0.044 11.6 0.0 0.05 11.4 0.0 1.0 1 0 0 1 1 1 0 AF-4 proto-oncoprotein NTP_transf_2 PF01909.18 gi|154150372|ref|YP_001403990.1| - 1.1e-13 51.2 0.5 1.3e-13 51.0 0.3 1.2 1 0 0 1 1 1 1 Nucleotidyltransferase domain DNA_pol_B_palm PF14792.1 gi|154150372|ref|YP_001403990.1| - 0.011 15.8 0.1 0.013 15.5 0.0 1.2 1 0 0 1 1 1 0 DNA polymerase beta palm MdcG PF10620.4 gi|154150372|ref|YP_001403990.1| - 0.015 14.8 0.0 0.023 14.2 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosyl-dephospho-CoA transferase MdcG Alph_Pro_TM PF09608.5 gi|154150372|ref|YP_001403990.1| - 0.054 13.0 0.1 0.065 12.7 0.0 1.1 1 0 0 1 1 1 0 Putative transmembrane protein (Alph_Pro_TM) DUF4269 PF14091.1 gi|154150372|ref|YP_001403990.1| - 0.1 12.4 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4269) AAA_4 PF04326.9 gi|154150373|ref|YP_001403991.1| - 5e-17 62.1 0.3 1.8e-16 60.4 0.2 2.0 1 0 0 1 1 1 1 Divergent AAA domain FeThRed_B PF02943.10 gi|154150374|ref|YP_001403992.1| - 4.1e-25 87.6 0.6 6.8e-25 86.8 0.4 1.3 1 0 0 1 1 1 1 Ferredoxin thioredoxin reductase catalytic beta chain RecR PF02132.10 gi|154150374|ref|YP_001403992.1| - 0.0044 16.4 1.2 0.0087 15.4 0.8 1.4 1 0 0 1 1 1 1 RecR protein Glutaredoxin PF00462.19 gi|154150375|ref|YP_001403993.1| - 4.1e-10 39.4 0.0 7.1e-10 38.7 0.0 1.4 2 0 0 2 2 2 1 Glutaredoxin GST_N_3 PF13417.1 gi|154150375|ref|YP_001403993.1| - 2.4e-08 34.0 0.0 3.1e-08 33.7 0.0 1.1 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_2 PF13409.1 gi|154150375|ref|YP_001403993.1| - 1.1e-06 28.5 0.0 1.4e-06 28.1 0.0 1.2 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain ArsC PF03960.10 gi|154150375|ref|YP_001403993.1| - 0.0021 18.1 0.0 1.1 9.3 0.0 2.1 2 0 0 2 2 2 2 ArsC family Thioredoxin_3 PF13192.1 gi|154150375|ref|YP_001403993.1| - 0.045 13.5 0.1 0.4 10.5 0.0 2.1 1 1 0 1 1 1 0 Thioredoxin domain GST_N PF02798.15 gi|154150375|ref|YP_001403993.1| - 0.1 12.8 0.0 0.14 12.3 0.0 1.3 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain CPSase_sm_chain PF00988.17 gi|154150376|ref|YP_001403994.1| - 6.7e-43 145.3 0.0 9.5e-43 144.8 0.0 1.2 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase small chain, CPSase domain GATase PF00117.23 gi|154150376|ref|YP_001403994.1| - 1.4e-38 132.3 0.0 2.2e-38 131.6 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|154150376|ref|YP_001403994.1| - 4.7e-09 36.0 0.1 1.1e-07 31.5 0.0 2.1 1 1 0 1 1 1 1 Peptidase C26 CPSase_L_D2 PF02786.12 gi|154150377|ref|YP_001403995.1| - 7.9e-105 348.7 0.5 5.1e-67 225.2 0.0 2.4 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_chain PF00289.17 gi|154150377|ref|YP_001403995.1| - 2.3e-47 159.6 0.1 7.1e-24 84.0 0.0 3.1 3 0 0 3 3 3 2 Carbamoyl-phosphate synthase L chain, N-terminal domain ATP-grasp_4 PF13535.1 gi|154150377|ref|YP_001403995.1| - 4.9e-37 127.4 0.0 2.1e-17 63.4 0.0 2.3 2 0 0 2 2 2 2 ATP-grasp domain CPSase_L_D3 PF02787.14 gi|154150377|ref|YP_001403995.1| - 8.7e-34 115.9 0.0 2.4e-33 114.5 0.0 1.8 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ATPgrasp_Ter PF15632.1 gi|154150377|ref|YP_001403995.1| - 6.6e-25 87.5 0.0 1e-10 40.8 0.1 4.1 3 1 0 3 3 3 3 ATP-grasp in the biosynthetic pathway with Ter operon MGS PF02142.17 gi|154150377|ref|YP_001403995.1| - 1.3e-22 79.4 0.1 2.6e-20 72.1 0.0 3.8 4 0 0 4 4 4 1 MGS-like domain ATP-grasp PF02222.17 gi|154150377|ref|YP_001403995.1| - 1.8e-17 63.2 0.0 7.9e-08 31.8 0.0 2.3 2 0 0 2 2 2 2 ATP-grasp domain Dala_Dala_lig_C PF07478.8 gi|154150377|ref|YP_001403995.1| - 1.2e-14 54.1 0.1 1.2e-07 31.3 0.0 2.7 2 1 0 2 2 2 2 D-ala D-ala ligase C-terminus ATP-grasp_3 PF02655.9 gi|154150377|ref|YP_001403995.1| - 8e-14 51.8 0.3 4e-07 30.0 0.0 2.6 2 0 0 2 2 2 2 ATP-grasp domain Glyco_trans_4_2 PF13477.1 gi|154150377|ref|YP_001403995.1| - 0.0065 16.3 0.0 0.99 9.2 0.0 2.8 2 0 0 2 2 2 1 Glycosyl transferase 4-like Hydrolase PF00702.21 gi|154150377|ref|YP_001403995.1| - 0.039 14.3 0.0 23 5.3 0.0 3.0 3 0 0 3 3 3 0 haloacid dehalogenase-like hydrolase ATP-grasp_5 PF13549.1 gi|154150377|ref|YP_001403995.1| - 0.044 12.9 0.0 4.7 6.3 0.0 2.7 2 0 0 2 2 2 0 ATP-grasp domain LPAM_1 PF08139.7 gi|154150378|ref|YP_001403996.1| - 0.28 11.4 1.1 0.5 10.6 0.7 1.5 1 0 0 1 1 1 0 Prokaryotic membrane lipoprotein lipid attachment site Arginosuc_synth PF00764.14 gi|154150379|ref|YP_001403997.1| - 5.5e-163 542.5 0.0 6.2e-163 542.3 0.0 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase QueC PF06508.8 gi|154150379|ref|YP_001403997.1| - 0.00096 18.4 0.0 0.0016 17.7 0.0 1.3 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.16 gi|154150379|ref|YP_001403997.1| - 0.0032 17.0 0.0 0.0045 16.5 0.0 1.3 1 0 0 1 1 1 1 Asparagine synthase NAD_synthase PF02540.12 gi|154150379|ref|YP_001403997.1| - 0.05 12.4 0.0 0.082 11.7 0.0 1.3 1 0 0 1 1 1 0 NAD synthase DUF2114 PF09887.4 gi|154150380|ref|YP_001403998.1| - 9.3e-228 755.9 0.3 1.1e-227 755.7 0.2 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2114) X_fast-SP_rel PF06669.6 gi|154150380|ref|YP_001403998.1| - 0.013 15.4 0.0 0.082 12.8 0.0 2.1 2 0 0 2 2 2 0 Xylella fastidiosa surface protein related Vps52 PF04129.7 gi|154150381|ref|YP_001403999.1| - 0.051 12.1 0.1 0.052 12.0 0.0 1.0 1 0 0 1 1 1 0 Vps52 / Sac2 family OTCace PF00185.19 gi|154150382|ref|YP_001404000.1| - 2e-49 167.4 0.0 3.9e-49 166.5 0.0 1.5 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OTCace_N PF02729.16 gi|154150382|ref|YP_001404000.1| - 7.9e-49 164.9 0.1 1.3e-48 164.2 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OCD_Mu_crystall PF02423.10 gi|154150382|ref|YP_001404000.1| - 0.028 13.1 0.0 0.045 12.5 0.0 1.3 1 0 0 1 1 1 0 Ornithine cyclodeaminase/mu-crystallin family GARS_A PF01071.14 gi|154150383|ref|YP_001404001.1| - 5.4e-56 189.2 0.0 8.4e-56 188.6 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_N PF02844.10 gi|154150383|ref|YP_001404001.1| - 6e-30 103.6 0.3 1.2e-29 102.7 0.2 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, N domain GARS_C PF02843.11 gi|154150383|ref|YP_001404001.1| - 1.1e-21 76.7 0.7 3.7e-20 71.8 0.0 2.7 3 0 0 3 3 3 1 Phosphoribosylglycinamide synthetase, C domain ATP-grasp_4 PF13535.1 gi|154150383|ref|YP_001404001.1| - 5.3e-13 49.0 0.0 1.2e-12 47.9 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|154150383|ref|YP_001404001.1| - 2.3e-07 29.8 0.0 7.6e-06 24.9 0.0 2.1 2 0 0 2 2 2 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_3 PF02655.9 gi|154150383|ref|YP_001404001.1| - 0.012 15.4 0.0 0.026 14.3 0.0 1.6 1 1 0 1 1 1 0 ATP-grasp domain ATPgrasp_ST PF14397.1 gi|154150383|ref|YP_001404001.1| - 0.047 12.7 0.0 0.13 11.3 0.0 1.6 2 0 0 2 2 2 0 Sugar-transfer associated ATP-grasp Pribosyltran PF00156.22 gi|154150384|ref|YP_001404002.1| - 2.3e-15 56.3 1.8 4.2e-15 55.5 1.3 1.4 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.1 gi|154150384|ref|YP_001404002.1| - 0.004 16.4 0.1 0.0048 16.1 0.1 1.2 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase DUF46 PF01864.12 gi|154150385|ref|YP_001404003.1| - 2.8e-46 157.5 2.2 3.2e-46 157.3 1.6 1.0 1 0 0 1 1 1 1 Putative integral membrane protein DUF46 CTP_transf_1 PF01148.15 gi|154150385|ref|YP_001404003.1| - 3e-07 30.3 0.1 3e-07 30.3 0.0 2.0 2 0 0 2 2 2 1 Cytidylyltransferase family DUF165 PF02592.10 gi|154150385|ref|YP_001404003.1| - 0.042 14.0 0.5 0.097 12.8 0.3 1.5 1 1 0 1 1 1 0 Uncharacterized ACR, YhhQ family COG1738 FtsX PF02687.16 gi|154150385|ref|YP_001404003.1| - 0.045 13.4 6.1 0.34 10.6 4.3 1.9 1 1 0 1 1 1 0 FtsX-like permease family Radical_SAM PF04055.16 gi|154150386|ref|YP_001404004.1| - 7.9e-21 74.9 0.2 1.6e-19 70.6 0.0 2.5 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|154150386|ref|YP_001404004.1| - 6.3e-08 32.8 0.1 1.9e-07 31.3 0.0 1.8 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|154150386|ref|YP_001404004.1| - 7.1e-08 32.4 1.4 1.2e-07 31.8 0.0 2.0 2 0 0 2 2 2 1 4Fe-4S single cluster domain TF_Zn_Ribbon PF08271.7 gi|154150386|ref|YP_001404004.1| - 0.016 14.5 0.1 0.15 11.4 0.1 2.6 2 0 0 2 2 2 0 TFIIB zinc-binding OCD_Mu_crystall PF02423.10 gi|154150387|ref|YP_001404005.1| - 5.5e-89 298.0 0.1 6.4e-89 297.8 0.1 1.0 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family Shikimate_DH PF01488.15 gi|154150387|ref|YP_001404005.1| - 0.002 18.2 0.0 0.0038 17.3 0.0 1.5 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.12 gi|154150387|ref|YP_001404005.1| - 0.011 16.1 0.0 0.049 14.0 0.0 1.9 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent UPF0058 PF01893.11 gi|154150388|ref|YP_001404006.1| - 1.8e-33 114.4 2.6 2e-33 114.3 1.8 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0058 TnpV PF14198.1 gi|154150388|ref|YP_001404006.1| - 0.095 12.6 0.1 0.14 12.0 0.0 1.3 1 1 0 1 1 1 0 Transposon-encoded protein TnpV Mgm101p PF06420.7 gi|154150388|ref|YP_001404006.1| - 0.12 11.7 0.0 0.12 11.6 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial genome maintenance MGM101 Toprim_4 PF13662.1 gi|154150389|ref|YP_001404007.1| - 1.3e-10 41.0 0.1 4.2e-10 39.4 0.0 2.0 1 0 0 1 1 1 1 Toprim domain Toprim PF01751.17 gi|154150389|ref|YP_001404007.1| - 0.00034 20.5 1.3 0.0034 17.3 0.3 3.1 2 1 0 2 2 2 1 Toprim domain DUF167 PF02594.11 gi|154150390|ref|YP_001404008.1| - 1.5e-18 66.5 0.0 1.7e-18 66.3 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 Amidohydro_4 PF13147.1 gi|154150391|ref|YP_001404009.1| - 5.9e-20 72.4 4.8 9.5e-20 71.7 3.3 1.4 1 0 0 1 1 1 1 Amidohydrolase Amidohydro_1 PF01979.15 gi|154150391|ref|YP_001404009.1| - 3.4e-12 46.6 0.0 4.8e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_5 PF13594.1 gi|154150391|ref|YP_001404009.1| - 8.9e-10 38.2 0.4 3e-09 36.5 0.2 1.9 1 0 0 1 1 1 1 Amidohydrolase DUF2196 PF09962.4 gi|154150393|ref|YP_001404011.1| - 5e-31 106.2 1.3 6.2e-31 105.9 0.9 1.1 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2196) UPF0150 PF03681.10 gi|154150395|ref|YP_001404013.1| - 1.5e-11 43.7 0.1 2.1e-11 43.2 0.1 1.3 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0150) DUF3832 PF12909.2 gi|154150395|ref|YP_001404013.1| - 0.067 13.2 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3832) AF0941-like PF14591.1 gi|154150395|ref|YP_001404013.1| - 0.08 12.9 0.1 0.1 12.6 0.1 1.1 1 0 0 1 1 1 0 AF0941-like YcfA PF07927.7 gi|154150396|ref|YP_001404014.1| - 7.8e-12 44.9 0.0 9.7e-12 44.6 0.0 1.2 1 0 0 1 1 1 1 YcfA-like protein NTP_transf_2 PF01909.18 gi|154150397|ref|YP_001404015.1| - 1.2e-12 47.9 0.0 1.4e-12 47.7 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyltransferase domain DUF294 PF03445.8 gi|154150397|ref|YP_001404015.1| - 0.12 12.0 0.0 0.2 11.2 0.0 1.5 1 1 0 1 1 1 0 Putative nucleotidyltransferase DUF294 Asn_synthase PF00733.16 gi|154150398|ref|YP_001404016.1| - 3e-41 141.5 0.2 2.3e-40 138.6 0.2 1.9 1 1 0 1 1 1 1 Asparagine synthase NAD_synthase PF02540.12 gi|154150398|ref|YP_001404016.1| - 0.001 18.0 0.0 0.0014 17.5 0.0 1.2 1 0 0 1 1 1 1 NAD synthase Glu-tRNAGln PF02686.10 gi|154150399|ref|YP_001404017.1| - 8.8e-16 57.4 0.0 1.7e-15 56.5 0.0 1.5 1 1 0 1 1 1 1 Glu-tRNAGln amidotransferase C subunit Amidase PF01425.16 gi|154150400|ref|YP_001404018.1| - 5.9e-144 480.1 1.2 7.1e-144 479.9 0.8 1.0 1 0 0 1 1 1 1 Amidase Acyl-CoA_dh_N PF02771.11 gi|154150400|ref|YP_001404018.1| - 0.1 13.1 0.3 0.24 11.9 0.0 1.8 2 0 0 2 2 2 0 Acyl-CoA dehydrogenase, N-terminal domain GatB_N PF02934.10 gi|154150401|ref|YP_001404019.1| - 1.7e-114 381.5 0.0 2.2e-114 381.1 0.0 1.1 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.13 gi|154150401|ref|YP_001404019.1| - 4.3e-37 127.0 0.0 6.3e-37 126.5 0.0 1.2 1 0 0 1 1 1 1 GatB domain Topoisom_bac PF01131.15 gi|154150402|ref|YP_001404020.1| - 5.8e-109 364.5 0.0 7.6e-109 364.2 0.0 1.1 1 0 0 1 1 1 1 DNA topoisomerase Toprim PF01751.17 gi|154150402|ref|YP_001404020.1| - 6.7e-15 54.8 0.1 1.6e-14 53.6 0.1 1.7 1 0 0 1 1 1 1 Toprim domain zf-C4_Topoisom PF01396.14 gi|154150402|ref|YP_001404020.1| - 6.6e-11 41.5 0.7 1.8e-10 40.1 0.5 1.7 1 0 0 1 1 1 1 Topoisomerase DNA binding C4 zinc finger HHH_5 PF14520.1 gi|154150402|ref|YP_001404020.1| - 1.2e-09 38.2 18.9 0.0034 17.5 2.3 5.2 5 0 0 5 5 5 4 Helix-hairpin-helix domain SAP PF02037.22 gi|154150402|ref|YP_001404020.1| - 0.088 12.3 0.6 0.69 9.4 0.0 2.6 2 0 0 2 2 2 0 SAP domain PcrB PF01884.12 gi|154150403|ref|YP_001404021.1| - 1.4e-57 194.6 0.9 1.6e-57 194.4 0.6 1.0 1 0 0 1 1 1 1 PcrB family His_biosynth PF00977.16 gi|154150403|ref|YP_001404021.1| - 0.047 12.9 0.0 0.087 12.0 0.0 1.5 1 0 0 1 1 1 0 Histidine biosynthesis protein Trp_syntA PF00290.15 gi|154150403|ref|YP_001404021.1| - 0.048 12.1 0.2 0.093 11.2 0.1 1.4 1 0 0 1 1 1 0 Tryptophan synthase alpha chain SpoU_methylase PF00588.14 gi|154150404|ref|YP_001404022.1| - 5.6e-25 87.8 0.0 7.6e-25 87.4 0.0 1.2 1 0 0 1 1 1 1 SpoU rRNA Methylase family Methyltrn_RNA_4 PF09936.4 gi|154150404|ref|YP_001404022.1| - 0.1 12.0 0.0 0.31 10.5 0.0 1.8 2 0 0 2 2 2 0 SAM-dependent RNA methyltransferase OsmC PF02566.14 gi|154150405|ref|YP_001404023.1| - 2.3e-13 50.1 0.0 4e-13 49.4 0.0 1.3 1 0 0 1 1 1 1 OsmC-like protein HGD-D PF06050.8 gi|154150406|ref|YP_001404024.1| - 9.6e-98 327.2 0.0 1.2e-97 326.9 0.0 1.1 1 0 0 1 1 1 1 2-hydroxyglutaryl-CoA dehydratase, D-component TP_methylase PF00590.15 gi|154150406|ref|YP_001404024.1| - 0.0064 16.2 0.0 0.32 10.6 0.0 2.3 1 1 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases BcrAD_BadFG PF01869.15 gi|154150407|ref|YP_001404025.1| - 3.5e-46 157.6 0.3 8.6e-45 153.1 0.2 2.0 1 1 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family CmcH_NodU PF02543.10 gi|154150407|ref|YP_001404025.1| - 0.00085 18.5 0.0 0.00099 18.3 0.0 1.2 1 0 0 1 1 1 1 Carbamoyltransferase FtsA PF14450.1 gi|154150407|ref|YP_001404025.1| - 0.0059 16.4 0.2 0.065 13.0 0.0 2.4 2 0 0 2 2 2 1 Cell division protein FtsA FGGY_C PF02782.11 gi|154150407|ref|YP_001404025.1| - 0.031 13.8 0.2 0.06 12.9 0.1 1.5 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, C-terminal domain FGGY_N PF00370.16 gi|154150407|ref|YP_001404025.1| - 0.083 12.1 0.0 2.5 7.3 0.0 2.1 2 0 0 2 2 2 0 FGGY family of carbohydrate kinases, N-terminal domain C_GCAxxG_C_C PF09719.5 gi|154150408|ref|YP_001404026.1| - 3.1e-32 110.9 0.8 3.8e-32 110.6 0.6 1.1 1 0 0 1 1 1 1 Putative redox-active protein (C_GCAxxG_C_C) HGD-D PF06050.8 gi|154150409|ref|YP_001404027.1| - 1.6e-97 326.4 0.1 1.9e-97 326.2 0.1 1.0 1 0 0 1 1 1 1 2-hydroxyglutaryl-CoA dehydratase, D-component TBPIP PF07106.8 gi|154150412|ref|YP_001404030.1| - 0.0034 16.9 2.4 0.21 11.1 2.6 2.1 1 1 1 2 2 2 1 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) Syntaxin_2 PF14523.1 gi|154150412|ref|YP_001404030.1| - 0.011 15.7 0.2 0.051 13.6 0.1 1.9 2 0 0 2 2 2 0 Syntaxin-like protein DUF2203 PF09969.4 gi|154150412|ref|YP_001404030.1| - 0.021 15.0 1.3 0.33 11.1 0.9 2.2 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) AAA_27 PF13514.1 gi|154150412|ref|YP_001404030.1| - 0.024 12.3 0.6 0.031 11.9 0.4 1.0 1 0 0 1 1 1 0 AAA domain V_ATPase_I PF01496.14 gi|154150412|ref|YP_001404030.1| - 0.03 12.1 0.2 0.031 12.1 0.1 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Seryl_tRNA_N PF02403.17 gi|154150412|ref|YP_001404030.1| - 0.033 14.2 0.7 0.067 13.2 0.5 1.5 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain DUF342 PF03961.8 gi|154150412|ref|YP_001404030.1| - 0.034 12.5 0.6 0.043 12.2 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF342) Latarcin PF10279.4 gi|154150412|ref|YP_001404030.1| - 0.035 14.2 0.8 0.067 13.3 0.6 1.5 1 0 0 1 1 1 0 Latarcin precursor FlgN PF05130.7 gi|154150412|ref|YP_001404030.1| - 0.079 13.2 0.6 0.14 12.4 0.4 1.4 1 0 0 1 1 1 0 FlgN protein APG6 PF04111.7 gi|154150412|ref|YP_001404030.1| - 0.081 11.9 2.1 0.11 11.5 1.4 1.1 1 0 0 1 1 1 0 Autophagy protein Apg6 DASH_Dad3 PF08656.5 gi|154150412|ref|YP_001404030.1| - 0.28 10.9 1.8 1.2 8.9 1.0 2.5 2 1 0 2 2 2 0 DASH complex subunit Dad3 FlaC_arch PF05377.6 gi|154150412|ref|YP_001404030.1| - 0.49 10.3 4.4 51 3.8 2.9 3.1 3 1 0 3 3 3 0 Flagella accessory protein C (FlaC) DUF217 PF02697.9 gi|154150412|ref|YP_001404030.1| - 0.61 10.3 3.8 0.52 10.6 1.2 1.9 2 0 0 2 2 2 0 Uncharacterized ACR, COG1753 DUF2935 PF11155.3 gi|154150412|ref|YP_001404030.1| - 0.69 10.0 3.6 1 9.4 1.9 1.7 2 1 0 2 2 2 0 Domain of unknown function (DUF2935) IncA PF04156.9 gi|154150412|ref|YP_001404030.1| - 0.73 9.3 4.7 1.3 8.5 3.2 1.3 1 1 0 1 1 1 0 IncA protein NIR_SIR PF01077.17 gi|154150413|ref|YP_001404031.1| - 1.3e-19 70.1 0.1 1.8e-19 69.6 0.1 1.1 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.12 gi|154150413|ref|YP_001404031.1| - 7e-19 67.2 0.0 1.4e-18 66.3 0.0 1.5 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain Fer4 PF00037.22 gi|154150413|ref|YP_001404031.1| - 9.8e-09 34.4 13.5 5.3e-05 22.6 1.3 3.5 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|154150413|ref|YP_001404031.1| - 8.1e-06 25.7 5.7 0.15 12.0 0.0 3.2 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|154150413|ref|YP_001404031.1| - 8.4e-06 26.0 14.0 1.3e-05 25.4 6.7 2.7 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|154150413|ref|YP_001404031.1| - 2.2e-05 24.1 16.6 0.0011 18.7 0.9 3.4 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|154150413|ref|YP_001404031.1| - 0.0002 21.1 13.4 0.033 14.0 0.4 2.7 2 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|154150413|ref|YP_001404031.1| - 0.00037 20.7 8.3 0.61 10.4 2.0 3.3 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|154150413|ref|YP_001404031.1| - 0.00041 20.1 9.8 0.00041 20.1 6.8 2.5 1 1 2 3 3 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|154150413|ref|YP_001404031.1| - 0.00045 20.9 6.6 0.18 12.5 0.5 2.7 3 0 0 3 3 2 2 4Fe-4S double cluster binding domain Fer4_11 PF13247.1 gi|154150413|ref|YP_001404031.1| - 0.00099 18.9 2.2 0.0025 17.6 1.5 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|154150413|ref|YP_001404031.1| - 0.0063 16.3 2.0 0.0063 16.3 1.4 3.6 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|154150413|ref|YP_001404031.1| - 0.0096 16.1 10.6 0.0096 16.1 7.3 3.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Ribosomal_L2 PF00181.18 gi|154150413|ref|YP_001404031.1| - 0.051 13.5 0.5 0.099 12.6 0.4 1.4 1 0 0 1 1 1 0 Ribosomal Proteins L2, RNA binding domain TFIIA_gamma_N PF02268.11 gi|154150413|ref|YP_001404031.1| - 0.12 12.0 0.0 0.23 11.0 0.0 1.5 1 0 0 1 1 1 0 Transcription initiation factor IIA, gamma subunit, helical domain Fer4_18 PF13746.1 gi|154150413|ref|YP_001404031.1| - 1.8 9.0 12.3 1.4 9.4 1.7 2.8 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|154150413|ref|YP_001404031.1| - 1.9 9.1 15.1 7 7.2 1.9 3.6 2 2 1 3 3 3 0 4Fe-4S single cluster domain Fer4_4 PF12800.2 gi|154150413|ref|YP_001404031.1| - 6.7 7.3 23.8 0.21 12.0 2.1 3.3 4 0 0 4 4 3 0 4Fe-4S binding domain Fer4_13 PF13370.1 gi|154150413|ref|YP_001404031.1| - 9.7 6.6 9.8 22 5.5 1.3 3.2 3 0 0 3 3 3 0 4Fe-4S single cluster domain KTSC PF13619.1 gi|154150414|ref|YP_001404032.1| - 0.001 18.6 0.0 0.0013 18.3 0.0 1.2 1 0 0 1 1 1 1 KTSC domain Rubredoxin PF00301.15 gi|154150415|ref|YP_001404033.1| - 1.3e-17 63.3 2.1 6.8e-11 41.8 0.2 2.1 2 0 0 2 2 2 2 Rubredoxin TFIIS_C PF01096.13 gi|154150415|ref|YP_001404033.1| - 0.0046 16.5 4.0 0.4 10.3 0.3 2.2 2 0 0 2 2 2 2 Transcription factor S-II (TFIIS) Zn-ribbon_8 PF09723.5 gi|154150415|ref|YP_001404033.1| - 0.0056 16.5 1.2 1.7 8.7 0.1 2.3 2 0 0 2 2 2 1 Zinc ribbon domain TF_Zn_Ribbon PF08271.7 gi|154150415|ref|YP_001404033.1| - 0.0059 15.9 1.1 2.6 7.4 0.1 2.5 2 0 0 2 2 2 2 TFIIB zinc-binding zf-ribbon_3 PF13248.1 gi|154150415|ref|YP_001404033.1| - 0.0079 15.3 1.3 0.22 10.7 0.1 2.3 2 0 0 2 2 2 1 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|154150415|ref|YP_001404033.1| - 0.011 15.2 1.1 0.35 10.4 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain A2L_zn_ribbon PF08792.5 gi|154150415|ref|YP_001404033.1| - 0.013 14.9 2.4 1.1 8.8 0.1 2.3 2 0 0 2 2 2 0 A2L zinc ribbon domain Nudix_N_2 PF14803.1 gi|154150415|ref|YP_001404033.1| - 0.021 14.5 1.9 3.8 7.2 0.2 2.3 2 0 0 2 2 2 0 Nudix N-terminal Zn_Tnp_IS1595 PF12760.2 gi|154150415|ref|YP_001404033.1| - 0.021 14.6 0.5 0.59 9.9 0.1 2.1 2 0 0 2 2 2 0 Transposase zinc-ribbon domain DUF4379 PF14311.1 gi|154150415|ref|YP_001404033.1| - 0.027 14.2 0.4 0.5 10.2 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4379) zf-Sec23_Sec24 PF04810.10 gi|154150415|ref|YP_001404033.1| - 0.037 13.5 0.1 4.1 7.0 0.0 2.2 2 0 0 2 2 2 0 Sec23/Sec24 zinc finger Desulfoferrod_N PF06397.7 gi|154150415|ref|YP_001404033.1| - 0.056 12.8 1.4 0.54 9.6 0.2 2.2 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain DUF4109 PF13397.1 gi|154150415|ref|YP_001404033.1| - 0.08 13.3 0.0 0.11 12.9 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4109) zf-C2H2_4 PF13894.1 gi|154150415|ref|YP_001404033.1| - 0.085 13.2 0.5 8.6 6.9 0.1 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger DUF2296 PF10058.4 gi|154150415|ref|YP_001404033.1| - 0.097 12.4 1.0 4.9 6.9 0.0 2.3 2 0 0 2 2 2 0 Predicted integral membrane metal-binding protein (DUF2296) zf-Mss51 PF13824.1 gi|154150415|ref|YP_001404033.1| - 0.13 12.1 0.3 0.81 9.5 0.0 2.0 2 0 0 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-C2H2 PF00096.21 gi|154150415|ref|YP_001404033.1| - 0.14 12.5 2.7 6.6 7.3 0.3 2.4 2 0 0 2 2 2 0 Zinc finger, C2H2 type Ribosomal_L37e PF01907.14 gi|154150415|ref|YP_001404033.1| - 0.16 11.7 1.3 2.7 7.8 0.2 2.2 2 0 0 2 2 2 0 Ribosomal protein L37e ADK_lid PF05191.9 gi|154150415|ref|YP_001404033.1| - 0.18 11.4 0.8 5.7 6.6 0.0 2.2 2 0 0 2 2 2 0 Adenylate kinase, active site lid zf-ISL3 PF14690.1 gi|154150415|ref|YP_001404033.1| - 0.25 11.4 2.3 0.53 10.3 0.2 2.0 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Ribosomal_S14 PF00253.16 gi|154150415|ref|YP_001404033.1| - 0.38 10.1 0.1 0.38 10.1 0.1 1.6 2 0 0 2 2 2 0 Ribosomal protein S14p/S29e zf-NADH-PPase PF09297.6 gi|154150415|ref|YP_001404033.1| - 0.42 10.1 2.5 6.2 6.4 0.3 2.3 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain RRN7 PF11781.3 gi|154150415|ref|YP_001404033.1| - 1.2 8.7 3.4 1.9 8.0 0.6 2.2 2 0 0 2 2 2 0 RNA polymerase I-specific transcription initiation factor Rrn7 zf-RanBP PF00641.13 gi|154150415|ref|YP_001404033.1| - 2.2 7.4 5.6 0.43 9.7 0.8 1.9 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others DrsE PF02635.10 gi|154150416|ref|YP_001404034.1| - 0.00012 22.1 0.0 0.00014 21.9 0.0 1.1 1 0 0 1 1 1 1 DsrE/DsrF-like family Bombinin PF05298.6 gi|154150416|ref|YP_001404034.1| - 0.03 13.7 0.0 0.048 13.1 0.0 1.4 1 1 0 1 1 1 0 Bombinin GXGXG PF01493.14 gi|154150418|ref|YP_001404036.1| - 8.5e-35 119.5 17.2 1.5e-34 118.8 11.8 1.4 1 1 0 1 1 1 1 GXGXG motif DIM PF08194.7 gi|154150418|ref|YP_001404036.1| - 0.0055 16.6 0.3 2.8 7.9 0.0 3.9 4 0 0 4 4 4 1 DIM protein Amidohydro_3 PF07969.6 gi|154150419|ref|YP_001404037.1| - 1.1e-53 182.9 0.1 1.2e-53 182.7 0.1 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_5 PF13594.1 gi|154150419|ref|YP_001404037.1| - 1.2e-08 34.6 1.0 3.2e-08 33.2 0.1 2.2 2 0 0 2 2 2 1 Amidohydrolase Amidohydro_1 PF01979.15 gi|154150419|ref|YP_001404037.1| - 0.0056 16.3 0.8 0.024 14.2 0.2 2.5 2 1 0 2 2 2 1 Amidohydrolase family Amidohydro_4 PF13147.1 gi|154150419|ref|YP_001404037.1| - 0.022 14.8 1.2 3 7.7 0.1 2.6 2 1 0 2 2 2 0 Amidohydrolase Molybdopterin PF00384.17 gi|154150420|ref|YP_001404038.1| - 3e-15 55.8 0.0 1.6e-14 53.5 0.0 1.9 1 1 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.16 gi|154150421|ref|YP_001404039.1| - 4.5e-13 48.9 0.0 5.5e-13 48.6 0.0 1.1 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Fer4 PF00037.22 gi|154150422|ref|YP_001404040.1| - 3e-18 64.5 13.6 3e-10 39.2 1.6 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|154150422|ref|YP_001404040.1| - 1.2e-16 60.8 23.3 2.8e-12 46.8 7.7 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|154150422|ref|YP_001404040.1| - 5.7e-14 51.2 12.3 4.4e-08 32.6 1.4 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|154150422|ref|YP_001404040.1| - 6.1e-14 52.0 21.5 1.6e-10 41.0 7.4 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|154150422|ref|YP_001404040.1| - 7.3e-12 44.9 20.7 1.4e-09 37.5 7.1 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|154150422|ref|YP_001404040.1| - 8.8e-12 44.2 12.6 1.8e-06 27.4 1.8 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|154150422|ref|YP_001404040.1| - 3.6e-10 40.4 6.5 3.6e-10 40.4 4.5 1.3 1 1 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|154150422|ref|YP_001404040.1| - 7e-10 38.6 11.9 7.6e-09 35.2 8.3 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|154150422|ref|YP_001404040.1| - 7.4e-10 38.3 10.8 6.4e-05 22.9 0.7 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|154150422|ref|YP_001404040.1| - 8.7e-09 35.2 8.9 2.3e-08 33.9 6.2 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|154150422|ref|YP_001404040.1| - 1.4e-08 34.9 21.6 8.9e-07 29.1 7.3 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|154150422|ref|YP_001404040.1| - 1.1e-07 32.1 10.4 0.0019 18.5 0.6 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|154150422|ref|YP_001404040.1| - 1.8e-07 31.6 11.5 0.00088 19.7 1.7 2.4 2 1 0 2 2 2 2 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|154150422|ref|YP_001404040.1| - 3.6e-06 27.1 25.9 0.0013 19.1 5.4 2.5 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_11 PF13247.1 gi|154150422|ref|YP_001404040.1| - 0.00013 21.7 4.2 0.015 15.1 0.3 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|154150422|ref|YP_001404040.1| - 0.00028 21.2 11.7 0.091 13.1 1.3 2.5 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_19 PF06902.6 gi|154150422|ref|YP_001404040.1| - 0.073 12.8 9.9 1.1 9.1 0.6 2.6 2 1 1 3 3 3 0 Divergent 4Fe-4S mono-cluster RL11D PF11088.3 gi|154150422|ref|YP_001404040.1| - 0.48 10.2 3.7 4.6 7.1 0.3 2.1 1 1 1 2 2 2 0 Glycoprotein encoding membrane proteins RL5A and RL6 DUF4001 PF13165.1 gi|154150422|ref|YP_001404040.1| - 2.5 7.8 9.2 1.8 8.3 1.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4001) Enterotoxin_HS1 PF08090.6 gi|154150422|ref|YP_001404040.1| - 4.1 7.2 10.6 3 7.6 1.4 2.3 2 0 0 2 2 2 0 Heat stable E.coli enterotoxin 1 Lactamase_B PF00753.22 gi|154150423|ref|YP_001404041.1| - 6.7e-14 51.9 0.8 1e-13 51.3 0.5 1.5 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|154150423|ref|YP_001404041.1| - 3.8e-08 33.1 0.1 1.9e-07 30.8 0.1 2.0 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.1 gi|154150423|ref|YP_001404041.1| - 0.00011 21.9 0.4 0.03 14.0 0.0 2.3 2 0 0 2 2 2 2 Beta-lactamase superfamily domain Asp_protease_2 PF13650.1 gi|154150423|ref|YP_001404041.1| - 0.017 15.5 0.0 0.036 14.5 0.0 1.5 1 0 0 1 1 1 0 Aspartyl protease PDEase_II PF02112.10 gi|154150423|ref|YP_001404041.1| - 0.14 11.0 0.3 0.21 10.4 0.2 1.1 1 0 0 1 1 1 0 cAMP phosphodiesterases class-II DrsE PF02635.10 gi|154150424|ref|YP_001404042.1| - 4.6e-16 58.9 0.0 2.6e-08 33.9 0.0 3.1 3 0 0 3 3 3 3 DsrE/DsrF-like family DUF959 PF06121.9 gi|154150424|ref|YP_001404042.1| - 0.1 12.2 0.0 0.17 11.4 0.0 1.3 1 0 0 1 1 1 0 Domain of Unknown Function (DUF959) dUTPase PF00692.14 gi|154150425|ref|YP_001404043.1| - 1.7e-12 46.9 0.0 2.3e-12 46.5 0.0 1.2 1 0 0 1 1 1 1 dUTPase DCD PF06559.6 gi|154150425|ref|YP_001404043.1| - 1.2e-07 30.5 0.0 2.5e-07 29.4 0.0 1.6 1 1 0 1 1 1 1 2'-deoxycytidine 5'-triphosphate deaminase (DCD) tRNA-Thr_ED PF08915.6 gi|154150426|ref|YP_001404044.1| - 3.2e-55 185.8 0.1 6e-55 184.9 0.1 1.5 1 0 0 1 1 1 1 Archaea-specific editing domain of threonyl-tRNA synthetase tRNA-synt_2b PF00587.20 gi|154150426|ref|YP_001404044.1| - 1.7e-22 79.8 0.4 3.4e-22 78.8 0.3 1.5 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.15 gi|154150426|ref|YP_001404044.1| - 4.2e-21 74.6 0.1 8.1e-21 73.7 0.1 1.5 1 0 0 1 1 1 1 Anticodon binding domain Glycoamylase PF10091.4 gi|154150426|ref|YP_001404044.1| - 0.014 14.4 0.0 0.026 13.5 0.0 1.4 1 0 0 1 1 1 0 Putative glucoamylase Prismane PF03063.15 gi|154150427|ref|YP_001404045.1| - 5e-166 553.0 0.1 6.7e-166 552.6 0.1 1.1 1 0 0 1 1 1 1 Prismane/CO dehydrogenase family WAK_assoc PF14380.1 gi|154150427|ref|YP_001404045.1| - 0.029 14.8 0.1 0.075 13.5 0.0 1.7 1 0 0 1 1 1 0 Wall-associated receptor kinase C-terminal CbiA PF01656.18 gi|154150428|ref|YP_001404046.1| - 3.7e-26 91.7 0.0 4.6e-26 91.4 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ArsA_ATPase PF02374.10 gi|154150428|ref|YP_001404046.1| - 2.1e-09 36.8 1.3 6.7e-09 35.2 0.1 2.2 2 1 0 2 2 2 1 Anion-transporting ATPase Fer4_NifH PF00142.13 gi|154150428|ref|YP_001404046.1| - 7.9e-07 28.5 0.4 4e-05 22.9 0.0 2.1 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_31 PF13614.1 gi|154150428|ref|YP_001404046.1| - 1.3e-06 28.4 0.0 6.1e-05 23.0 0.0 2.5 3 0 0 3 3 2 1 AAA domain AAA_19 PF13245.1 gi|154150428|ref|YP_001404046.1| - 6.6e-05 22.5 0.7 0.00015 21.4 0.1 2.0 2 0 0 2 2 1 1 Part of AAA domain AAA_16 PF13191.1 gi|154150428|ref|YP_001404046.1| - 0.00014 21.9 0.0 0.00021 21.3 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain ArgK PF03308.11 gi|154150428|ref|YP_001404046.1| - 0.00022 20.0 0.3 0.00081 18.2 0.0 1.9 2 0 0 2 2 2 1 ArgK protein YhjQ PF06564.7 gi|154150428|ref|YP_001404046.1| - 0.00033 20.0 0.4 0.0014 18.0 0.0 2.0 2 0 0 2 2 2 1 YhjQ protein APS_kinase PF01583.15 gi|154150428|ref|YP_001404046.1| - 0.0011 18.6 0.0 0.0018 17.9 0.0 1.3 1 0 0 1 1 1 1 Adenylylsulphate kinase ABC_tran PF00005.22 gi|154150428|ref|YP_001404046.1| - 0.0014 18.9 0.0 0.0028 17.9 0.0 1.5 1 0 0 1 1 1 1 ABC transporter SRP54 PF00448.17 gi|154150428|ref|YP_001404046.1| - 0.0014 18.1 0.4 0.0091 15.4 0.1 2.0 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain AAA_24 PF13479.1 gi|154150428|ref|YP_001404046.1| - 0.0019 17.8 0.0 0.0028 17.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain UPF0079 PF02367.12 gi|154150428|ref|YP_001404046.1| - 0.0028 17.2 0.2 0.39 10.3 0.0 2.3 2 0 0 2 2 2 1 Uncharacterised P-loop hydrolase UPF0079 AAA_18 PF13238.1 gi|154150428|ref|YP_001404046.1| - 0.003 17.8 0.0 0.0051 17.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain MobB PF03205.9 gi|154150428|ref|YP_001404046.1| - 0.0039 16.9 0.1 0.01 15.5 0.0 1.7 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B ParA PF10609.4 gi|154150428|ref|YP_001404046.1| - 0.0039 17.0 0.0 0.0067 16.2 0.0 1.4 1 0 0 1 1 1 1 ParA/MinD ATPase like AAA_25 PF13481.1 gi|154150428|ref|YP_001404046.1| - 0.0039 16.6 0.1 0.04 13.3 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|154150428|ref|YP_001404046.1| - 0.0045 17.7 0.7 0.011 16.5 0.4 1.6 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.1 gi|154150428|ref|YP_001404046.1| - 0.006 16.1 0.1 0.012 15.1 0.1 1.4 1 0 0 1 1 1 1 AAA domain MipZ PF09140.6 gi|154150428|ref|YP_001404046.1| - 0.0067 15.5 0.1 0.014 14.5 0.1 1.4 1 0 0 1 1 1 1 ATPase MipZ IstB_IS21 PF01695.12 gi|154150428|ref|YP_001404046.1| - 0.0073 15.7 0.0 0.021 14.2 0.0 1.7 2 0 0 2 2 2 1 IstB-like ATP binding protein NTPase_1 PF03266.10 gi|154150428|ref|YP_001404046.1| - 0.0077 15.9 0.5 0.016 14.8 0.1 1.7 2 0 0 2 2 2 1 NTPase AAA_10 PF12846.2 gi|154150428|ref|YP_001404046.1| - 0.012 15.1 0.1 0.048 13.1 0.0 1.8 2 0 0 2 2 2 0 AAA-like domain KTI12 PF08433.5 gi|154150428|ref|YP_001404046.1| - 0.019 14.1 0.0 0.032 13.4 0.0 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 NACHT PF05729.7 gi|154150428|ref|YP_001404046.1| - 0.021 14.4 0.2 0.041 13.5 0.2 1.4 1 0 0 1 1 1 0 NACHT domain KAP_NTPase PF07693.9 gi|154150428|ref|YP_001404046.1| - 0.022 13.7 0.0 0.022 13.7 0.0 1.2 1 0 0 1 1 1 0 KAP family P-loop domain DUF218 PF02698.12 gi|154150428|ref|YP_001404046.1| - 0.028 13.9 0.1 0.69 9.3 0.0 2.5 2 1 1 3 3 3 0 DUF218 domain AAA_5 PF07728.9 gi|154150428|ref|YP_001404046.1| - 0.031 13.9 0.0 0.058 13.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) T2SE PF00437.15 gi|154150428|ref|YP_001404046.1| - 0.035 12.9 0.0 0.057 12.3 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_29 PF13555.1 gi|154150428|ref|YP_001404046.1| - 0.05 13.1 0.0 0.1 12.1 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain NB-ARC PF00931.17 gi|154150428|ref|YP_001404046.1| - 0.051 12.4 0.1 0.081 11.7 0.1 1.2 1 0 0 1 1 1 0 NB-ARC domain PGM_PMM_II PF02879.11 gi|154150428|ref|YP_001404046.1| - 0.052 13.8 0.0 0.12 12.7 0.0 1.6 1 0 0 1 1 1 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AAA_14 PF13173.1 gi|154150428|ref|YP_001404046.1| - 0.062 13.1 0.0 0.13 12.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.1 gi|154150428|ref|YP_001404046.1| - 0.071 13.0 0.4 0.12 12.3 0.1 1.5 2 0 0 2 2 1 0 AAA domain Mur_ligase_M PF08245.7 gi|154150428|ref|YP_001404046.1| - 0.088 12.8 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 Mur ligase middle domain Sigma54_activat PF00158.21 gi|154150428|ref|YP_001404046.1| - 0.092 12.2 0.0 0.17 11.3 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain Zeta_toxin PF06414.7 gi|154150428|ref|YP_001404046.1| - 0.1 11.6 0.1 0.26 10.3 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin VirC1 PF07015.6 gi|154150428|ref|YP_001404046.1| - 0.14 11.2 0.0 0.27 10.2 0.0 1.4 1 0 0 1 1 1 0 VirC1 protein DAP3 PF10236.4 gi|154150428|ref|YP_001404046.1| - 0.14 11.0 0.0 0.22 10.4 0.0 1.2 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 AAA_22 PF13401.1 gi|154150428|ref|YP_001404046.1| - 0.14 12.2 0.0 0.37 10.9 0.0 1.6 2 0 0 2 2 1 0 AAA domain NUDIX PF00293.23 gi|154150429|ref|YP_001404047.1| - 4.4e-18 65.2 0.0 8.9e-18 64.2 0.0 1.4 1 0 0 1 1 1 1 NUDIX domain zf-NADH-PPase PF09297.6 gi|154150429|ref|YP_001404047.1| - 4.9e-11 41.9 5.2 1e-10 40.8 3.6 1.6 1 0 0 1 1 1 1 NADH pyrophosphatase zinc ribbon domain OrfB_Zn_ribbon PF07282.6 gi|154150429|ref|YP_001404047.1| - 2.9e-05 23.6 1.2 5.5e-05 22.7 0.8 1.4 1 0 0 1 1 1 1 Putative transposase DNA-binding domain NUDIX-like PF09296.6 gi|154150429|ref|YP_001404047.1| - 0.0026 18.0 0.0 0.0062 16.8 0.0 1.6 2 0 0 2 2 2 1 NADH pyrophosphatase-like rudimentary NUDIX domain DZR PF12773.2 gi|154150429|ref|YP_001404047.1| - 0.0039 16.9 1.7 0.0073 16.0 1.2 1.4 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|154150429|ref|YP_001404047.1| - 0.004 16.3 0.9 1.6 7.9 0.1 2.5 2 0 0 2 2 2 2 zinc-ribbon domain TF_Zn_Ribbon PF08271.7 gi|154150429|ref|YP_001404047.1| - 0.0069 15.6 0.1 0.014 14.7 0.1 1.5 1 0 0 1 1 1 1 TFIIB zinc-binding HypA PF01155.14 gi|154150429|ref|YP_001404047.1| - 0.15 11.7 0.4 0.3 10.7 0.3 1.4 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family DNA_RNApol_7kD PF03604.8 gi|154150429|ref|YP_001404047.1| - 0.16 11.4 0.4 0.38 10.2 0.3 1.6 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit zf-Mss51 PF13824.1 gi|154150429|ref|YP_001404047.1| - 0.17 11.7 1.1 0.33 10.8 0.8 1.5 1 0 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 UPF0547 PF10571.4 gi|154150429|ref|YP_001404047.1| - 0.27 10.9 3.2 5 6.9 0.2 2.4 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 Zn_Tnp_IS1595 PF12760.2 gi|154150429|ref|YP_001404047.1| - 0.67 9.8 5.5 1.3 8.8 3.8 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Nudix_N_2 PF14803.1 gi|154150429|ref|YP_001404047.1| - 2 8.1 7.5 2.4 7.9 3.2 2.6 2 1 0 2 2 2 0 Nudix N-terminal Response_reg PF00072.19 gi|154150430|ref|YP_001404048.1| - 2.5e-13 50.0 0.0 1.1e-12 47.8 0.0 2.3 1 0 0 1 1 1 1 Response regulator receiver domain DUF948 PF06103.6 gi|154150430|ref|YP_001404048.1| - 0.1 12.4 15.3 1 9.2 0.1 5.8 3 2 3 6 6 6 0 Bacterial protein of unknown function (DUF948) Reo_sigmaC PF04582.7 gi|154150430|ref|YP_001404048.1| - 2.7 7.0 34.9 0.51 9.4 1.2 5.7 1 1 2 6 6 6 0 Reovirus sigma C capsid protein DUF457 PF04307.9 gi|154150431|ref|YP_001404049.1| - 4.4e-12 45.6 17.1 8.9e-12 44.6 11.9 1.5 1 1 0 1 1 1 1 Predicted membrane-bound metal-dependent hydrolase (DUF457) Zn_dep_PLPC PF00882.13 gi|154150431|ref|YP_001404049.1| - 0.0092 15.6 0.0 0.018 14.7 0.0 1.4 1 1 0 1 1 1 1 Zinc dependent phospholipase C SBP_bac_11 PF13531.1 gi|154150433|ref|YP_001404051.1| - 9.2e-42 143.2 9.2 9.2e-42 143.2 6.4 1.7 1 1 1 2 2 2 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.20 gi|154150433|ref|YP_001404051.1| - 6.8e-10 39.1 10.9 6.9e-10 39.1 6.2 1.9 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein PBP_like PF12727.2 gi|154150433|ref|YP_001404051.1| - 6.4e-08 31.7 0.1 8.8e-08 31.3 0.1 1.2 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_6 PF13343.1 gi|154150433|ref|YP_001404051.1| - 5.7e-06 25.8 2.9 1.1e-05 24.8 2.0 1.5 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein DUF4010 PF13194.1 gi|154150433|ref|YP_001404051.1| - 2.9 7.1 13.1 4.9 6.4 9.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4010) BPD_transp_1 PF00528.17 gi|154150434|ref|YP_001404052.1| - 2e-16 60.0 16.7 2e-16 60.0 11.6 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF996 PF06195.8 gi|154150434|ref|YP_001404052.1| - 0.24 11.3 10.2 0.58 10.1 0.6 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF996) zf-DHHC PF01529.15 gi|154150434|ref|YP_001404052.1| - 5.1 6.4 5.7 17 4.7 1.5 2.4 1 1 1 2 2 2 0 DHHC palmitoyltransferase ABC_tran PF00005.22 gi|154150435|ref|YP_001404053.1| - 5.8e-32 110.8 0.0 8.1e-32 110.3 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|154150435|ref|YP_001404053.1| - 6.8e-09 36.1 0.0 0.002 18.1 0.0 2.1 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|154150435|ref|YP_001404053.1| - 2e-08 33.7 0.0 3.4e-07 29.7 0.0 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.1 gi|154150435|ref|YP_001404053.1| - 1.4e-06 28.4 0.0 2.5e-06 27.6 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.1 gi|154150435|ref|YP_001404053.1| - 1e-05 24.9 0.2 1.9e-05 24.1 0.2 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain SbcCD_C PF13558.1 gi|154150435|ref|YP_001404053.1| - 4.5e-05 23.2 0.6 0.00051 19.9 0.4 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_10 PF12846.2 gi|154150435|ref|YP_001404053.1| - 0.0001 21.8 0.4 0.34 10.2 0.1 2.1 2 0 0 2 2 2 2 AAA-like domain AAA_23 PF13476.1 gi|154150435|ref|YP_001404053.1| - 0.00018 21.9 0.0 0.00025 21.4 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.1 gi|154150435|ref|YP_001404053.1| - 0.00089 19.4 0.1 0.022 14.8 0.0 2.1 2 0 0 2 2 2 1 AAA domain DUF258 PF03193.11 gi|154150435|ref|YP_001404053.1| - 0.0034 16.5 0.0 0.0052 15.9 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_15 PF13175.1 gi|154150435|ref|YP_001404053.1| - 0.0087 15.1 0.0 0.19 10.7 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain AAA_19 PF13245.1 gi|154150435|ref|YP_001404053.1| - 0.012 15.3 0.0 0.029 14.1 0.0 1.7 1 0 0 1 1 1 0 Part of AAA domain AAA_13 PF13166.1 gi|154150435|ref|YP_001404053.1| - 0.019 13.4 0.0 0.027 12.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain T2SE PF00437.15 gi|154150435|ref|YP_001404053.1| - 0.023 13.5 0.1 0.033 13.0 0.1 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_28 PF13521.1 gi|154150435|ref|YP_001404053.1| - 0.054 13.4 0.3 3 7.7 0.2 2.3 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.18 gi|154150435|ref|YP_001404053.1| - 0.054 13.4 0.1 0.14 12.1 0.0 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase SRP54 PF00448.17 gi|154150435|ref|YP_001404053.1| - 0.11 11.8 0.3 0.22 10.9 0.1 1.5 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain FtsK_SpoIIIE PF01580.13 gi|154150435|ref|YP_001404053.1| - 0.12 11.7 0.0 0.22 10.9 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family PAS_8 PF13188.1 gi|154150436|ref|YP_001404054.1| - 2.7e-08 33.3 0.0 6e-08 32.2 0.0 1.6 1 0 0 1 1 1 1 PAS domain PAS_9 PF13426.1 gi|154150436|ref|YP_001404054.1| - 1.4e-06 28.6 0.0 2.2e-06 27.9 0.0 1.3 1 0 0 1 1 1 1 PAS domain PAS PF00989.19 gi|154150436|ref|YP_001404054.1| - 0.00037 20.2 0.0 0.00057 19.6 0.0 1.3 1 0 0 1 1 1 1 PAS fold PAS_3 PF08447.6 gi|154150436|ref|YP_001404054.1| - 0.0032 17.5 0.0 0.0054 16.7 0.0 1.3 1 0 0 1 1 1 1 PAS fold DUF3325 PF11804.3 gi|154150436|ref|YP_001404054.1| - 0.95 9.4 5.9 1.9 8.4 4.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3325) KdpA PF03814.10 gi|154150437|ref|YP_001404055.1| - 5.1e-214 711.3 32.2 7.1e-214 710.9 22.3 1.1 1 0 0 1 1 1 1 Potassium-transporting ATPase A subunit KdpC PF02669.10 gi|154150437|ref|YP_001404055.1| - 1.1e-64 217.6 0.9 2.3e-64 216.5 0.6 1.6 1 0 0 1 1 1 1 K+-transporting ATPase, c chain DUF1517 PF07466.6 gi|154150437|ref|YP_001404055.1| - 0.00045 19.3 1.9 0.0011 17.9 1.3 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF1517) Hydrolase PF00702.21 gi|154150438|ref|YP_001404056.1| - 2.7e-36 126.0 3.2 5.3e-36 125.0 2.2 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase E1-E2_ATPase PF00122.15 gi|154150438|ref|YP_001404056.1| - 2.3e-30 105.3 0.5 2.3e-30 105.3 0.3 2.2 2 0 0 2 2 2 1 E1-E2 ATPase HAD PF12710.2 gi|154150438|ref|YP_001404056.1| - 1.2e-11 45.1 0.0 3.3e-11 43.7 0.0 1.8 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|154150438|ref|YP_001404056.1| - 4.4e-05 23.1 0.6 0.00017 21.2 0.1 2.0 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Response_reg PF00072.19 gi|154150438|ref|YP_001404056.1| - 0.056 13.4 0.0 0.33 10.9 0.0 2.2 2 0 0 2 2 2 0 Response regulator receiver domain KdpD PF02702.12 gi|154150439|ref|YP_001404057.1| - 2.2e-98 327.5 0.9 3.2e-98 327.0 0.6 1.2 1 0 0 1 1 1 1 Osmosensitive K+ channel His kinase sensor domain DUF4118 PF13493.1 gi|154150439|ref|YP_001404057.1| - 2.6e-17 62.9 9.8 4.6e-17 62.1 6.8 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4118) Usp PF00582.21 gi|154150439|ref|YP_001404057.1| - 1.9e-12 47.5 0.4 1.2e-11 44.9 0.0 2.4 2 0 0 2 2 2 1 Universal stress protein family GAF_3 PF13492.1 gi|154150439|ref|YP_001404057.1| - 4.2e-11 43.0 0.0 1.4e-10 41.3 0.0 2.0 1 0 0 1 1 1 1 GAF domain Peripla_BP_2 PF01497.13 gi|154150439|ref|YP_001404057.1| - 0.049 12.7 0.0 0.089 11.9 0.0 1.3 1 0 0 1 1 1 0 Periplasmic binding protein GAF_2 PF13185.1 gi|154150439|ref|YP_001404057.1| - 0.06 13.8 0.1 0.28 11.6 0.1 2.2 1 1 0 1 1 1 0 GAF domain BRI3BP PF14965.1 gi|154150440|ref|YP_001404058.1| - 0.68 9.2 3.2 0.74 9.1 2.2 1.1 1 0 0 1 1 1 0 Negative regulator of p53/TP53 DUF485 PF04341.7 gi|154150440|ref|YP_001404058.1| - 3 7.6 10.0 5.2 6.8 6.9 1.4 1 1 0 1 1 1 0 Protein of unknown function, DUF485 Glyco_trans_1_3 PF13528.1 gi|154150441|ref|YP_001404059.1| - 4.7e-15 55.5 0.0 6.9e-07 28.7 0.0 2.1 2 0 0 2 2 2 2 Glycosyl transferase family 1 Glyco_tran_28_C PF04101.11 gi|154150441|ref|YP_001404059.1| - 8.9e-06 25.4 0.0 1.4e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain DUF45 PF01863.12 gi|154150442|ref|YP_001404060.1| - 1.7e-57 194.5 0.1 2e-57 194.3 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF45 WLM PF08325.5 gi|154150442|ref|YP_001404060.1| - 0.00046 20.1 0.0 0.00075 19.4 0.0 1.3 1 0 0 1 1 1 1 WLM domain Peptidase_M56 PF05569.6 gi|154150442|ref|YP_001404060.1| - 0.1 11.5 0.1 0.16 10.9 0.1 1.2 1 0 0 1 1 1 0 BlaR1 peptidase M56 Response_reg PF00072.19 gi|154150443|ref|YP_001404061.1| - 8.4e-25 86.9 0.1 9.5e-25 86.7 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain DUF1938 PF09153.5 gi|154150443|ref|YP_001404061.1| - 0.06 13.1 0.0 0.09 12.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1938) His_biosynth PF00977.16 gi|154150443|ref|YP_001404061.1| - 0.1 11.8 0.0 0.12 11.5 0.0 1.1 1 0 0 1 1 1 0 Histidine biosynthesis protein Peptidase_M75 PF09375.5 gi|154150444|ref|YP_001404062.1| - 0.021 14.1 0.1 0.021 14.1 0.1 1.2 1 0 0 1 1 1 0 Imelysin IL6Ra-bind PF09240.5 gi|154150444|ref|YP_001404062.1| - 0.055 13.6 0.3 0.072 13.2 0.2 1.1 1 0 0 1 1 1 0 Interleukin-6 receptor alpha chain, binding Flavodoxin_4 PF12682.2 gi|154150446|ref|YP_001404064.1| - 1.2e-08 34.4 0.0 5.8e-08 32.2 0.0 1.8 1 1 0 1 1 1 1 Flavodoxin FMN_red PF03358.10 gi|154150446|ref|YP_001404064.1| - 8.9e-08 31.7 0.0 1e-07 31.5 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_5 PF12724.2 gi|154150446|ref|YP_001404064.1| - 1.4e-06 28.3 0.0 0.00016 21.7 0.0 2.2 1 1 0 1 1 1 1 Flavodoxin domain Flavodoxin_1 PF00258.20 gi|154150446|ref|YP_001404064.1| - 1.5e-05 25.0 0.0 0.014 15.3 0.0 2.0 2 0 0 2 2 2 2 Flavodoxin Flavodoxin_3 PF12641.2 gi|154150446|ref|YP_001404064.1| - 0.0039 16.6 0.0 0.011 15.2 0.0 1.7 1 1 1 2 2 2 1 Flavodoxin domain Flavodoxin_2 PF02525.12 gi|154150446|ref|YP_001404064.1| - 0.043 13.3 0.0 0.051 13.0 0.0 1.4 1 1 0 1 1 1 0 Flavodoxin-like fold PTH2 PF01981.11 gi|154150448|ref|YP_001404066.1| - 1.6e-40 137.4 0.0 1.8e-40 137.2 0.0 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 TruD PF01142.13 gi|154150449|ref|YP_001404067.1| - 1.1e-106 356.6 0.0 1.3e-106 356.5 0.0 1.0 1 0 0 1 1 1 1 tRNA pseudouridine synthase D (TruD) Peptidase_S49 PF01343.13 gi|154150450|ref|YP_001404068.1| - 8.7e-37 126.2 1.5 1.1e-36 125.8 1.0 1.1 1 0 0 1 1 1 1 Peptidase family S49 SDH_sah PF01972.11 gi|154150450|ref|YP_001404068.1| - 0.0091 14.8 0.1 0.015 14.0 0.1 1.3 1 0 0 1 1 1 1 Serine dehydrogenase proteinase CLP_protease PF00574.18 gi|154150450|ref|YP_001404068.1| - 0.015 14.9 0.3 0.067 12.8 0.0 1.9 2 0 0 2 2 2 0 Clp protease RibD_C PF01872.12 gi|154150451|ref|YP_001404069.1| - 1.5e-43 148.7 0.0 1.7e-43 148.5 0.0 1.0 1 0 0 1 1 1 1 RibD C-terminal domain CDP-OH_P_transf PF01066.16 gi|154150452|ref|YP_001404070.1| - 1.2e-16 60.8 11.6 2.7e-16 59.7 8.1 1.8 1 1 0 1 1 1 1 CDP-alcohol phosphatidyltransferase DUF4131 PF13567.1 gi|154150452|ref|YP_001404070.1| - 1.3 8.4 4.5 8.1 5.8 1.8 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4131) Exosortase_EpsH PF09721.5 gi|154150453|ref|YP_001404071.1| - 6.9e-46 156.6 27.4 8.4e-46 156.3 19.0 1.1 1 0 0 1 1 1 1 Transmembrane exosortase (Exosortase_EpsH) TFIIS_C PF01096.13 gi|154150454|ref|YP_001404072.1| - 1.2e-17 63.2 11.0 2.2e-17 62.3 1.7 3.2 3 0 0 3 3 3 1 Transcription factor S-II (TFIIS) RNA_POL_M_15KD PF02150.11 gi|154150454|ref|YP_001404072.1| - 1.2e-08 34.4 1.6 1.2e-08 34.4 1.1 3.1 3 0 0 3 3 3 1 RNA polymerases M/15 Kd subunit Zn_Tnp_IS1595 PF12760.2 gi|154150454|ref|YP_001404072.1| - 4.6e-06 26.3 6.7 0.00051 19.7 0.4 2.4 2 0 0 2 2 2 2 Transposase zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|154150454|ref|YP_001404072.1| - 6.9e-05 21.9 8.0 0.0041 16.2 0.2 3.3 3 0 0 3 3 3 1 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|154150454|ref|YP_001404072.1| - 9.9e-05 21.8 15.3 0.044 13.3 0.3 4.1 3 1 0 3 3 3 2 zinc-ribbon domain TF_Zn_Ribbon PF08271.7 gi|154150454|ref|YP_001404072.1| - 0.00012 21.3 10.8 0.004 16.4 0.5 3.2 2 2 0 2 2 2 2 TFIIB zinc-binding DZR PF12773.2 gi|154150454|ref|YP_001404072.1| - 0.00018 21.2 6.3 0.044 13.6 0.4 2.5 2 1 0 2 2 2 2 Double zinc ribbon DUF2387 PF09526.5 gi|154150454|ref|YP_001404072.1| - 0.00019 21.2 9.8 0.002 18.0 0.0 3.0 1 1 1 2 2 2 1 Probable metal-binding protein (DUF2387) zinc_ribbon_4 PF13717.1 gi|154150454|ref|YP_001404072.1| - 0.00061 19.4 17.0 0.11 12.2 0.4 4.1 3 1 0 3 3 3 2 zinc-ribbon domain zinc-ribbons_6 PF07191.7 gi|154150454|ref|YP_001404072.1| - 0.00091 18.9 7.4 0.016 15.0 0.3 2.7 2 1 0 2 2 2 1 zinc-ribbons zf-TFIIB PF13453.1 gi|154150454|ref|YP_001404072.1| - 0.0014 17.7 0.9 0.0014 17.7 0.6 3.1 3 1 0 3 3 3 1 Transcription factor zinc-finger Ogr_Delta PF04606.7 gi|154150454|ref|YP_001404072.1| - 0.0031 17.1 7.6 0.0049 16.4 0.2 3.1 3 0 0 3 3 3 1 Ogr/Delta-like zinc finger DNA_RNApol_7kD PF03604.8 gi|154150454|ref|YP_001404072.1| - 0.0038 16.6 11.8 0.13 11.7 0.7 3.4 3 0 0 3 3 3 2 DNA directed RNA polymerase, 7 kDa subunit zf-DNA_Pol PF08996.5 gi|154150454|ref|YP_001404072.1| - 0.0044 16.4 0.2 0.0044 16.4 0.2 2.1 1 1 1 2 2 2 1 DNA Polymerase alpha zinc finger Lar_restr_allev PF14354.1 gi|154150454|ref|YP_001404072.1| - 0.01 16.1 5.2 0.42 10.9 0.3 2.9 1 1 1 2 2 2 0 Restriction alleviation protein Lar OrfB_Zn_ribbon PF07282.6 gi|154150454|ref|YP_001404072.1| - 0.014 15.0 11.1 0.28 10.8 0.8 2.9 2 1 0 2 2 2 0 Putative transposase DNA-binding domain zinc_ribbon_2 PF13240.1 gi|154150454|ref|YP_001404072.1| - 0.018 14.5 16.1 0.22 11.0 2.0 3.6 3 1 0 3 3 3 0 zinc-ribbon domain UPF0547 PF10571.4 gi|154150454|ref|YP_001404072.1| - 0.018 14.6 14.1 0.89 9.3 0.4 3.7 3 1 0 3 3 3 0 Uncharacterised protein family UPF0547 Mu-like_Com PF10122.4 gi|154150454|ref|YP_001404072.1| - 0.035 13.1 12.3 0.19 10.7 0.1 3.5 3 1 0 3 3 3 0 Mu-like prophage protein Com zf-RING_5 PF14634.1 gi|154150454|ref|YP_001404072.1| - 0.044 13.5 0.4 0.044 13.5 0.3 2.6 2 2 0 2 2 2 0 zinc-RING finger domain zf-ISL3 PF14690.1 gi|154150454|ref|YP_001404072.1| - 0.047 13.7 5.2 40 4.3 0.0 4.2 4 0 0 4 4 4 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Prok-RING_1 PF14446.1 gi|154150454|ref|YP_001404072.1| - 0.05 13.3 4.7 1.7 8.4 0.2 3.1 3 0 0 3 3 3 0 Prokaryotic RING finger family 1 Zn-ribbon_8 PF09723.5 gi|154150454|ref|YP_001404072.1| - 0.091 12.7 15.3 3.8 7.5 0.5 4.3 3 1 0 4 4 4 0 Zinc ribbon domain Zn_Tnp_IS1 PF03811.8 gi|154150454|ref|YP_001404072.1| - 0.11 12.0 0.2 0.11 12.0 0.2 3.7 3 1 0 3 3 2 0 InsA N-terminal domain FUR PF01475.14 gi|154150454|ref|YP_001404072.1| - 0.11 12.3 0.5 0.74 9.7 0.1 2.0 2 0 0 2 2 2 0 Ferric uptake regulator family zf-AN1 PF01428.11 gi|154150454|ref|YP_001404072.1| - 0.14 12.0 10.6 3.5 7.5 1.1 3.1 3 0 0 3 3 3 0 AN1-like Zinc finger Baculo_LEF5_C PF11792.3 gi|154150454|ref|YP_001404072.1| - 0.27 10.6 0.1 0.27 10.6 0.1 3.0 4 0 0 4 4 3 0 Baculoviridae late expression factor 5 C-terminal domain Nudix_N_2 PF14803.1 gi|154150454|ref|YP_001404072.1| - 0.32 10.7 7.7 21 4.8 0.0 4.1 4 0 0 4 4 4 0 Nudix N-terminal C1_1 PF00130.17 gi|154150454|ref|YP_001404072.1| - 0.33 10.7 8.2 1.4 8.6 1.2 2.4 2 1 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) HypA PF01155.14 gi|154150454|ref|YP_001404072.1| - 0.37 10.4 10.2 0.5 10.0 1.0 2.8 1 1 2 3 3 3 0 Hydrogenase expression/synthesis hypA family Ribosomal_S27e PF01667.12 gi|154150454|ref|YP_001404072.1| - 0.4 10.2 9.3 1.3 8.5 0.1 3.5 3 1 1 4 4 4 0 Ribosomal protein S27 zf-RING_3 PF14369.1 gi|154150454|ref|YP_001404072.1| - 0.44 10.5 3.0 19 5.3 0.0 3.3 3 0 0 3 3 3 0 zinc-finger zf-C4_Topoisom PF01396.14 gi|154150454|ref|YP_001404072.1| - 0.51 9.8 0.2 0.51 9.8 0.2 3.6 3 1 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger Rpr2 PF04032.11 gi|154150454|ref|YP_001404072.1| - 0.81 9.6 12.8 6.4 6.7 5.1 3.0 1 1 1 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain zf-PHD-like PF15446.1 gi|154150454|ref|YP_001404072.1| - 0.89 8.8 7.6 1.6 7.9 1.3 2.2 1 1 1 2 2 2 0 PHD/FYVE-zinc-finger like domain DUF164 PF02591.10 gi|154150454|ref|YP_001404072.1| - 0.94 9.3 6.0 2.2 8.1 0.1 2.8 3 0 0 3 3 3 0 Putative zinc ribbon domain DUF1451 PF07295.6 gi|154150454|ref|YP_001404072.1| - 1.1 9.0 5.8 3.6 7.3 0.0 3.1 2 1 0 2 2 2 0 Protein of unknown function (DUF1451) Rubredoxin PF00301.15 gi|154150454|ref|YP_001404072.1| - 1.2 9.0 9.4 6.8 6.6 0.0 4.0 4 0 0 4 4 4 0 Rubredoxin A2L_zn_ribbon PF08792.5 gi|154150454|ref|YP_001404072.1| - 2.7 7.5 14.2 16 5.1 0.1 4.1 3 1 1 4 4 4 0 A2L zinc ribbon domain PhnA_Zn_Ribbon PF08274.7 gi|154150454|ref|YP_001404072.1| - 3 7.7 14.0 20 5.0 0.4 3.8 3 1 0 3 3 3 0 PhnA Zinc-Ribbon FYVE PF01363.16 gi|154150454|ref|YP_001404072.1| - 3.2 7.7 9.3 19 5.2 6.4 2.2 1 1 0 1 1 1 0 FYVE zinc finger RRN7 PF11781.3 gi|154150454|ref|YP_001404072.1| - 4 7.0 11.5 18 4.9 1.0 3.5 3 1 0 3 3 3 0 RNA polymerase I-specific transcription initiation factor Rrn7 zf-RING_4 PF14570.1 gi|154150454|ref|YP_001404072.1| - 4.1 7.0 10.9 13 5.4 0.0 3.7 3 1 0 3 3 3 0 RING/Ubox like zinc-binding domain RPA_interact_C PF14768.1 gi|154150454|ref|YP_001404072.1| - 4.3 7.7 7.3 87 3.6 5.0 2.3 1 1 0 1 1 1 0 Replication protein A interacting C-terminal zf-C3HC4_3 PF13920.1 gi|154150454|ref|YP_001404072.1| - 5.4 6.7 8.0 24 4.7 0.8 3.1 3 0 0 3 3 3 0 Zinc finger, C3HC4 type (RING finger) IBR PF01485.16 gi|154150454|ref|YP_001404072.1| - 6.2 6.7 13.4 1.9e+03 -1.2 9.3 2.9 1 1 0 1 1 1 0 IBR domain zf-DNL PF05180.7 gi|154150454|ref|YP_001404072.1| - 8.7 6.1 12.3 12 5.7 0.2 3.7 3 1 1 4 4 4 0 DNL zinc finger Phage_GPO PF05929.6 gi|154150455|ref|YP_001404073.1| - 0.017 14.3 7.0 0.038 13.2 0.5 2.1 1 1 1 2 2 2 0 Phage capsid scaffolding protein (GPO) serine peptidase PhoU PF01895.14 gi|154150455|ref|YP_001404073.1| - 0.029 14.8 3.6 0.044 14.2 1.5 2.1 1 1 1 2 2 2 0 PhoU domain Folate_carrier PF01770.13 gi|154150455|ref|YP_001404073.1| - 0.029 12.9 0.4 0.044 12.2 0.3 1.4 1 1 0 1 1 1 0 Reduced folate carrier FlxA PF14282.1 gi|154150455|ref|YP_001404073.1| - 0.039 13.9 9.1 0.065 13.1 6.3 1.4 1 0 0 1 1 1 0 FlxA-like protein DUF148 PF02520.12 gi|154150455|ref|YP_001404073.1| - 0.068 12.9 5.0 0.14 11.9 3.5 1.6 1 0 0 1 1 1 0 Domain of unknown function DUF148 Spc7 PF08317.6 gi|154150455|ref|YP_001404073.1| - 0.093 11.3 11.6 0.15 10.7 8.0 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein APG6 PF04111.7 gi|154150455|ref|YP_001404073.1| - 0.11 11.5 9.0 0.14 11.1 6.2 1.2 1 0 0 1 1 1 0 Autophagy protein Apg6 DUF4131 PF13567.1 gi|154150455|ref|YP_001404073.1| - 0.12 11.8 0.0 0.18 11.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) DUF2990 PF11693.3 gi|154150455|ref|YP_001404073.1| - 0.15 11.9 0.0 0.31 10.9 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2990) DUF904 PF06005.7 gi|154150455|ref|YP_001404073.1| - 0.51 10.6 15.7 0.19 12.0 2.4 3.7 3 1 1 4 4 4 0 Protein of unknown function (DUF904) Phage_GP20 PF06810.6 gi|154150455|ref|YP_001404073.1| - 0.57 9.6 14.1 1.2 8.5 2.0 2.7 1 1 2 3 3 3 0 Phage minor structural protein GP20 DUF342 PF03961.8 gi|154150455|ref|YP_001404073.1| - 0.6 8.4 7.7 0.94 7.8 5.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF342) DUF4200 PF13863.1 gi|154150455|ref|YP_001404073.1| - 0.95 9.4 16.7 11 5.9 11.5 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) DUF1664 PF07889.7 gi|154150455|ref|YP_001404073.1| - 1.4 8.7 7.9 4.3 7.1 5.4 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) TPR_MLP1_2 PF07926.7 gi|154150455|ref|YP_001404073.1| - 1.5 8.5 15.5 2.7 7.7 10.5 1.7 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein DUF4094 PF13334.1 gi|154150455|ref|YP_001404073.1| - 1.5 9.2 7.5 3.5 8.0 5.2 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) Fib_alpha PF08702.5 gi|154150455|ref|YP_001404073.1| - 1.6 8.8 8.4 3.5 7.7 5.8 1.6 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family Syntaxin-6_N PF09177.6 gi|154150455|ref|YP_001404073.1| - 5.4 7.4 8.7 16 5.9 5.2 2.2 1 1 2 3 3 3 0 Syntaxin 6, N-terminal OmpH PF03938.9 gi|154150455|ref|YP_001404073.1| - 5.7 6.8 10.8 15 5.4 7.5 1.8 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) Pox_A_type_inc PF04508.7 gi|154150455|ref|YP_001404073.1| - 7.7 6.5 7.3 2.2 8.2 0.3 3.7 3 1 0 3 3 3 0 Viral A-type inclusion protein repeat Response_reg PF00072.19 gi|154150456|ref|YP_001404074.1| - 5.6e-16 58.5 0.0 6.2e-16 58.3 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain ATP-grasp_5 PF13549.1 gi|154150457|ref|YP_001404075.1| - 1.1e-67 227.5 0.2 1.6e-67 227.0 0.2 1.2 1 0 0 1 1 1 1 ATP-grasp domain Succ_CoA_lig PF13607.1 gi|154150457|ref|YP_001404075.1| - 4.3e-52 175.3 0.1 8.1e-52 174.4 0.1 1.5 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.1 gi|154150457|ref|YP_001404075.1| - 1.2e-26 93.1 0.4 4.1e-26 91.4 0.2 2.1 2 0 0 2 2 2 1 CoA binding domain CoA_binding PF02629.14 gi|154150457|ref|YP_001404075.1| - 8.8e-16 58.2 1.3 3.4e-15 56.3 0.3 2.4 2 0 0 2 2 2 1 CoA binding domain ATP-grasp_2 PF08442.5 gi|154150457|ref|YP_001404075.1| - 0.00073 18.9 0.2 0.0013 18.1 0.1 1.5 1 1 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.1 gi|154150457|ref|YP_001404075.1| - 0.025 14.3 0.0 0.049 13.3 0.0 1.5 1 0 0 1 1 1 0 ATP-grasp domain AMP-binding PF00501.23 gi|154150458|ref|YP_001404076.1| - 1.6e-96 323.2 0.1 2e-96 322.9 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|154150458|ref|YP_001404076.1| - 2.8e-22 79.4 0.1 7.8e-22 78.0 0.1 1.8 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain TBP PF00352.16 gi|154150459|ref|YP_001404077.1| - 2.3e-61 203.1 0.0 6.2e-31 105.6 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.3 gi|154150459|ref|YP_001404077.1| - 4.2e-05 23.5 0.0 0.11 12.6 0.0 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) DUF3252 PF11623.3 gi|154150459|ref|YP_001404077.1| - 0.04 13.3 0.0 4.9 6.6 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3252) DUF677 PF05055.7 gi|154150459|ref|YP_001404077.1| - 0.051 12.2 0.0 0.074 11.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF677) TrmB PF01978.14 gi|154150460|ref|YP_001404078.1| - 0.00014 21.5 0.0 0.0002 20.9 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.2 gi|154150460|ref|YP_001404078.1| - 0.0044 16.6 0.0 0.0065 16.1 0.0 1.3 1 0 0 1 1 1 1 MarR family PadR PF03551.9 gi|154150460|ref|YP_001404078.1| - 0.015 15.0 0.0 0.028 14.1 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family HPPK PF01288.15 gi|154150460|ref|YP_001404078.1| - 0.078 12.7 0.3 0.23 11.2 0.0 1.8 2 0 0 2 2 2 0 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HTH_34 PF13601.1 gi|154150460|ref|YP_001404078.1| - 0.083 12.9 0.0 0.16 12.0 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF387 PF04079.11 gi|154150460|ref|YP_001404078.1| - 0.087 12.1 0.0 0.12 11.6 0.0 1.5 1 1 0 1 1 1 0 Putative transcriptional regulators (Ypuh-like) DUF3189 PF11385.3 gi|154150460|ref|YP_001404078.1| - 0.11 12.0 0.0 0.15 11.5 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3189) Rib_5-P_isom_A PF06026.9 gi|154150461|ref|YP_001404079.1| - 1.8e-56 190.1 0.0 2.2e-56 189.8 0.0 1.1 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DeoRC PF00455.17 gi|154150461|ref|YP_001404079.1| - 2.2e-06 27.3 0.0 3.5e-05 23.4 0.0 2.1 2 0 0 2 2 2 1 DeoR C terminal sensor domain Sugar-bind PF04198.8 gi|154150461|ref|YP_001404079.1| - 0.026 13.4 0.0 0.043 12.6 0.0 1.4 1 0 0 1 1 1 0 Putative sugar-binding domain SurE PF01975.12 gi|154150462|ref|YP_001404080.1| - 1.1e-53 181.5 0.5 1.3e-53 181.1 0.3 1.1 1 0 0 1 1 1 1 Survival protein SurE ATP-grasp_3 PF02655.9 gi|154150463|ref|YP_001404081.1| - 1.1e-28 100.1 0.0 3.9e-28 98.3 0.0 1.8 1 1 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.1 gi|154150463|ref|YP_001404081.1| - 1.3e-10 41.3 0.2 5.6e-09 35.9 0.1 3.0 1 1 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|154150463|ref|YP_001404081.1| - 8.5e-05 21.4 0.2 0.0036 16.0 0.0 2.5 1 1 1 2 2 2 1 ATP-grasp in the biosynthetic pathway with Ter operon Dala_Dala_lig_C PF07478.8 gi|154150463|ref|YP_001404081.1| - 0.018 14.4 0.0 0.031 13.6 0.0 1.3 1 0 0 1 1 1 0 D-ala D-ala ligase C-terminus CPSase_L_D2 PF02786.12 gi|154150463|ref|YP_001404081.1| - 0.062 12.5 0.0 0.097 11.9 0.0 1.2 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain Hydantoinase_A PF01968.13 gi|154150464|ref|YP_001404082.1| - 1.5e-07 30.8 0.2 0.00084 18.5 0.0 2.5 3 0 0 3 3 3 2 Hydantoinase/oxoprolinase DZR PF12773.2 gi|154150465|ref|YP_001404083.1| - 0.0098 15.6 0.5 0.032 14.0 0.4 1.9 1 1 0 1 1 1 1 Double zinc ribbon zf-ISL3 PF14690.1 gi|154150465|ref|YP_001404083.1| - 0.012 15.5 1.1 0.021 14.8 0.8 1.4 1 0 0 1 1 1 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CpXC PF14353.1 gi|154150465|ref|YP_001404083.1| - 0.034 14.1 0.1 0.053 13.4 0.1 1.3 1 0 0 1 1 1 0 CpXC protein Nudix_N_2 PF14803.1 gi|154150465|ref|YP_001404083.1| - 0.036 13.7 4.9 1.8 8.3 0.4 2.8 2 0 0 2 2 2 0 Nudix N-terminal zinc_ribbon_2 PF13240.1 gi|154150465|ref|YP_001404083.1| - 0.047 13.1 2.7 5.5 6.6 0.0 2.6 3 0 0 3 3 3 0 zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|154150465|ref|YP_001404083.1| - 0.053 12.7 5.3 1.3 8.3 0.1 2.7 3 0 0 3 3 3 0 zinc-ribbon domain Lar_restr_allev PF14354.1 gi|154150465|ref|YP_001404083.1| - 0.077 13.3 0.4 0.24 11.7 0.3 1.8 1 1 0 1 1 1 0 Restriction alleviation protein Lar GFA PF04828.9 gi|154150465|ref|YP_001404083.1| - 0.14 12.1 0.6 13 5.8 0.0 2.4 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme TF_Zn_Ribbon PF08271.7 gi|154150465|ref|YP_001404083.1| - 0.5 9.7 5.7 1.8 7.9 0.0 2.8 3 0 0 3 3 3 0 TFIIB zinc-binding ADK_lid PF05191.9 gi|154150465|ref|YP_001404083.1| - 0.9 9.2 4.3 7.2 6.3 0.1 2.5 2 0 0 2 2 2 0 Adenylate kinase, active site lid Zn_Tnp_IS1595 PF12760.2 gi|154150465|ref|YP_001404083.1| - 0.99 9.2 4.0 2.9 7.7 1.7 2.4 2 1 0 2 2 2 0 Transposase zinc-ribbon domain Molybdopterin PF00384.17 gi|154150466|ref|YP_001404084.1| - 7.6e-69 232.5 1.7 9.5e-69 232.1 1.2 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molybdop_Fe4S4 PF04879.11 gi|154150466|ref|YP_001404084.1| - 2.8e-19 68.6 2.1 5.9e-19 67.6 0.5 2.1 2 0 0 2 2 2 1 Molybdopterin oxidoreductase Fe4S4 domain Molydop_binding PF01568.16 gi|154150466|ref|YP_001404084.1| - 8e-13 48.1 0.2 2.7e-12 46.4 0.1 1.9 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain MTH865 PF07747.6 gi|154150466|ref|YP_001404084.1| - 0.04 13.5 0.3 3.3 7.4 0.0 2.9 2 0 0 2 2 2 0 MTH865-like family TFIIIC_sub6 PF10419.4 gi|154150466|ref|YP_001404084.1| - 0.21 11.0 0.0 0.63 9.5 0.0 1.8 2 0 0 2 2 2 0 TFIIIC subunit FrhB_FdhB_C PF04432.8 gi|154150467|ref|YP_001404085.1| - 2.8e-39 134.1 0.2 5.7e-39 133.1 0.1 1.5 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.8 gi|154150467|ref|YP_001404085.1| - 5.1e-24 83.9 0.1 1.1e-23 82.9 0.1 1.5 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4_8 PF13183.1 gi|154150467|ref|YP_001404085.1| - 5.5e-08 32.7 16.0 1.4e-07 31.4 10.1 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.22 gi|154150467|ref|YP_001404085.1| - 2.4e-06 26.9 17.4 0.0012 18.3 1.8 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|154150467|ref|YP_001404085.1| - 8.6e-06 25.3 18.4 0.00029 20.5 2.1 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|154150467|ref|YP_001404085.1| - 1e-05 25.8 13.2 1e-05 25.8 9.2 2.5 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|154150467|ref|YP_001404085.1| - 4.1e-05 23.8 16.2 4.9e-05 23.6 9.2 2.4 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|154150467|ref|YP_001404085.1| - 0.0015 18.7 16.2 0.0015 18.7 11.2 3.0 2 2 1 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|154150467|ref|YP_001404085.1| - 0.005 16.5 24.2 0.01 15.6 1.8 3.2 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|154150467|ref|YP_001404085.1| - 0.0061 17.0 8.2 0.2 12.2 1.0 2.7 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|154150467|ref|YP_001404085.1| - 0.007 16.7 13.2 0.007 16.7 9.2 3.0 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|154150467|ref|YP_001404085.1| - 0.044 13.6 21.9 0.35 10.7 13.9 3.0 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|154150467|ref|YP_001404085.1| - 0.055 13.8 1.5 0.055 13.8 1.1 3.8 3 1 0 3 3 3 0 4Fe-4S binding domain Fer4_16 PF13484.1 gi|154150467|ref|YP_001404085.1| - 0.069 13.8 15.0 0.24 12.1 0.2 3.5 3 0 0 3 3 3 0 4Fe-4S double cluster binding domain Fer4_13 PF13370.1 gi|154150467|ref|YP_001404085.1| - 0.088 13.2 16.5 1.4 9.3 2.3 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain Cupredoxin_1 PF13473.1 gi|154150468|ref|YP_001404086.1| - 1.6e-09 37.5 0.0 2e-09 37.2 0.0 1.1 1 0 0 1 1 1 1 Cupredoxin-like domain Copper-bind PF00127.15 gi|154150468|ref|YP_001404086.1| - 4.2e-05 23.6 0.0 0.00012 22.1 0.0 1.7 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family DUF2387 PF09526.5 gi|154150469|ref|YP_001404087.1| - 0.00041 20.2 0.1 0.00056 19.7 0.0 1.2 1 0 0 1 1 1 1 Probable metal-binding protein (DUF2387) Lar_restr_allev PF14354.1 gi|154150469|ref|YP_001404087.1| - 0.00055 20.1 0.1 0.00078 19.6 0.1 1.3 1 0 0 1 1 1 1 Restriction alleviation protein Lar zf-ribbon_3 PF13248.1 gi|154150469|ref|YP_001404087.1| - 0.00098 18.2 2.9 0.0035 16.5 2.0 1.9 1 1 0 1 1 1 1 zinc-ribbon domain zf-Mss51 PF13824.1 gi|154150469|ref|YP_001404087.1| - 0.0037 17.0 2.9 1.1 9.1 0.1 2.2 1 1 1 2 2 2 2 Zinc-finger of mitochondrial splicing suppressor 51 zinc_ribbon_2 PF13240.1 gi|154150469|ref|YP_001404087.1| - 0.0043 16.4 0.5 0.36 10.3 0.0 2.4 2 0 0 2 2 2 1 zinc-ribbon domain Ribosomal_S27e PF01667.12 gi|154150469|ref|YP_001404087.1| - 0.013 15.0 0.2 0.024 14.1 0.1 1.4 1 0 0 1 1 1 0 Ribosomal protein S27 Elf1 PF05129.8 gi|154150469|ref|YP_001404087.1| - 0.019 14.6 0.0 0.031 13.9 0.0 1.4 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like zinc_ribbon_5 PF13719.1 gi|154150469|ref|YP_001404087.1| - 0.027 14.0 2.2 4.1 7.0 0.1 2.5 3 0 0 3 3 3 0 zinc-ribbon domain zf-TRAF PF02176.13 gi|154150469|ref|YP_001404087.1| - 0.04 14.3 0.1 0.068 13.5 0.1 1.4 1 0 0 1 1 1 0 TRAF-type zinc finger OrfB_Zn_ribbon PF07282.6 gi|154150469|ref|YP_001404087.1| - 0.071 12.7 0.2 0.13 11.9 0.1 1.5 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zinc_ribbon_4 PF13717.1 gi|154150469|ref|YP_001404087.1| - 0.072 12.7 2.3 5 6.8 0.1 2.5 3 0 0 3 3 3 0 zinc-ribbon domain Nudix_N_2 PF14803.1 gi|154150469|ref|YP_001404087.1| - 0.099 12.3 1.1 0.62 9.7 0.7 2.0 1 1 0 1 1 1 0 Nudix N-terminal DNA_RNApol_7kD PF03604.8 gi|154150469|ref|YP_001404087.1| - 0.13 11.7 1.2 1.4 8.4 0.9 2.1 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit DZR PF12773.2 gi|154150469|ref|YP_001404087.1| - 0.19 11.5 1.9 0.54 10.1 1.3 1.7 1 1 0 1 1 1 0 Double zinc ribbon IBR PF01485.16 gi|154150469|ref|YP_001404087.1| - 0.19 11.6 1.9 0.5 10.2 1.3 1.8 1 1 0 1 1 1 0 IBR domain Cys_rich_CPCC PF14206.1 gi|154150469|ref|YP_001404087.1| - 0.2 11.2 1.5 0.58 9.7 1.1 1.8 1 1 0 1 1 1 0 Cysteine-rich CPCC zf-NADH-PPase PF09297.6 gi|154150469|ref|YP_001404087.1| - 0.27 10.7 2.5 9.7 5.8 0.3 2.4 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain Ribosomal_L37e PF01907.14 gi|154150469|ref|YP_001404087.1| - 0.54 10.1 2.9 2.2 8.1 2.0 2.0 1 1 0 1 1 1 0 Ribosomal protein L37e zf-H2C2_2 PF13465.1 gi|154150469|ref|YP_001404087.1| - 0.99 9.8 3.9 2.3 8.6 0.2 2.4 1 1 1 2 2 2 0 Zinc-finger double domain UPF0547 PF10571.4 gi|154150469|ref|YP_001404087.1| - 1.1 9.0 5.4 13 5.5 3.7 2.1 1 1 0 1 1 1 0 Uncharacterised protein family UPF0547 Zn-ribbon_8 PF09723.5 gi|154150469|ref|YP_001404087.1| - 5.2 7.1 5.7 4.7 7.2 0.5 2.3 1 1 0 2 2 2 0 Zinc ribbon domain DUF1610 PF07754.6 gi|154150469|ref|YP_001404087.1| - 7.7 6.7 6.9 3.5 7.8 0.3 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) E1-E2_ATPase PF00122.15 gi|154150470|ref|YP_001404088.1| - 9.4e-70 234.2 3.3 9.4e-70 234.2 2.3 2.8 2 1 0 2 2 2 1 E1-E2 ATPase Hydrolase PF00702.21 gi|154150470|ref|YP_001404088.1| - 7.7e-29 101.6 2.7 1.4e-28 100.7 1.9 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.2 gi|154150470|ref|YP_001404088.1| - 3.7e-12 46.7 0.0 1e-11 45.3 0.0 1.8 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.21 gi|154150470|ref|YP_001404088.1| - 8.2e-10 38.0 0.0 8.2e-10 38.0 0.0 2.4 3 0 0 3 3 3 1 Cation transporter/ATPase, N-terminus Hydrolase_3 PF08282.7 gi|154150470|ref|YP_001404088.1| - 1.6e-05 24.6 0.6 0.0004 20.0 0.2 2.2 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Voltage_CLC PF00654.15 gi|154150471|ref|YP_001404089.1| - 9e-80 268.3 37.6 9e-80 268.3 26.1 2.0 2 0 0 2 2 2 2 Voltage gated chloride channel CBS PF00571.23 gi|154150471|ref|YP_001404089.1| - 4.2e-26 90.4 3.4 3.6e-12 45.8 0.1 2.5 2 0 0 2 2 2 2 CBS domain DUF190 PF02641.10 gi|154150472|ref|YP_001404090.1| - 7.3e-27 93.1 0.1 8.1e-27 93.0 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized ACR, COG1993 CRCB PF02537.10 gi|154150473|ref|YP_001404091.1| - 1.5e-27 95.8 9.4 1.7e-27 95.6 6.5 1.0 1 0 0 1 1 1 1 CrcB-like protein GtrA PF04138.9 gi|154150473|ref|YP_001404091.1| - 0.069 13.1 0.9 0.29 11.0 0.4 2.0 2 0 0 2 2 2 0 GtrA-like protein MFS_1 PF07690.11 gi|154150473|ref|YP_001404091.1| - 1.6 7.3 12.0 0.45 9.1 5.8 1.6 1 1 1 2 2 2 0 Major Facilitator Superfamily CRCB PF02537.10 gi|154150474|ref|YP_001404092.1| - 2.3e-21 75.8 16.3 2.7e-21 75.6 11.3 1.0 1 0 0 1 1 1 1 CrcB-like protein GtrA PF04138.9 gi|154150474|ref|YP_001404092.1| - 0.11 12.4 8.7 0.39 10.6 0.2 2.2 2 0 0 2 2 2 0 GtrA-like protein Enolase_N PF03952.11 gi|154150475|ref|YP_001404093.1| - 2.6e-09 37.1 0.0 2.7e-09 37.0 0.0 1.0 1 0 0 1 1 1 1 Enolase, N-terminal domain Dynamin_N PF00350.18 gi|154150476|ref|YP_001404094.1| - 1.9e-24 86.4 0.0 5.2e-24 84.9 0.0 1.7 1 0 0 1 1 1 1 Dynamin family MMR_HSR1 PF01926.18 gi|154150476|ref|YP_001404094.1| - 1.5e-10 41.0 0.0 9.2e-10 38.4 0.0 2.3 1 1 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.22 gi|154150476|ref|YP_001404094.1| - 6.2e-06 25.7 0.0 0.00044 19.7 0.0 2.9 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain IIGP PF05049.8 gi|154150476|ref|YP_001404094.1| - 0.00016 20.6 0.0 0.0004 19.3 0.0 1.6 2 0 0 2 2 2 1 Interferon-inducible GTPase (IIGP) DUF258 PF03193.11 gi|154150476|ref|YP_001404094.1| - 0.011 14.8 0.0 0.042 13.0 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function, DUF258 AIG1 PF04548.11 gi|154150476|ref|YP_001404094.1| - 0.02 13.9 0.1 0.43 9.6 0.1 2.3 1 1 1 2 2 2 0 AIG1 family Miro PF08477.8 gi|154150476|ref|YP_001404094.1| - 0.044 14.2 0.0 0.17 12.4 0.0 1.9 1 1 1 2 2 2 0 Miro-like protein FeoB_N PF02421.13 gi|154150476|ref|YP_001404094.1| - 0.064 12.5 0.0 1.8 7.8 0.0 2.4 2 0 0 2 2 2 0 Ferrous iron transport protein B Septin PF00735.13 gi|154150476|ref|YP_001404094.1| - 0.18 10.7 0.0 5.8 5.8 0.0 2.4 2 0 0 2 2 2 0 Septin V4R PF02830.13 gi|154150477|ref|YP_001404095.1| - 1.1e-12 47.6 0.5 1.9e-12 46.8 0.4 1.4 1 0 0 1 1 1 1 V4R domain XylR_N PF06505.6 gi|154150477|ref|YP_001404095.1| - 0.016 14.6 0.0 0.029 13.7 0.0 1.5 1 0 0 1 1 1 0 Activator of aromatic catabolism HATPase_c PF02518.21 gi|154150478|ref|YP_001404096.1| - 2.6e-16 59.3 0.0 4.5e-16 58.5 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.1 gi|154150478|ref|YP_001404096.1| - 0.01 15.6 0.0 0.031 14.0 0.0 1.8 1 1 0 1 1 1 0 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.1 gi|154150478|ref|YP_001404096.1| - 0.018 14.7 0.0 0.031 13.9 0.0 1.3 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.1 gi|154150478|ref|YP_001404096.1| - 0.15 11.7 0.0 0.29 10.8 0.0 1.4 1 0 0 1 1 1 0 GHKL domain PAS_9 PF13426.1 gi|154150479|ref|YP_001404097.1| - 2.8e-69 230.0 0.1 8.8e-12 45.3 0.0 6.6 6 0 0 6 6 6 6 PAS domain PAS_3 PF08447.6 gi|154150479|ref|YP_001404097.1| - 9.7e-50 166.6 0.2 1.7e-15 56.8 0.0 6.7 6 0 0 6 6 6 6 PAS fold PAS PF00989.19 gi|154150479|ref|YP_001404097.1| - 1.5e-46 156.8 0.1 1.6e-11 43.9 0.0 7.4 5 1 2 7 7 7 6 PAS fold PAS_4 PF08448.5 gi|154150479|ref|YP_001404097.1| - 7.9e-43 144.9 3.5 1.5e-09 37.9 0.0 6.6 6 0 0 6 6 6 5 PAS fold PAS_8 PF13188.1 gi|154150479|ref|YP_001404097.1| - 6.9e-38 127.2 0.2 8.5e-06 25.4 0.0 6.9 6 0 0 6 6 6 6 PAS domain HisKA_2 PF07568.7 gi|154150479|ref|YP_001404097.1| - 3.2e-26 90.9 2.4 1.1e-25 89.2 1.7 2.0 1 0 0 1 1 1 1 Histidine kinase GAF_2 PF13185.1 gi|154150479|ref|YP_001404097.1| - 1.2e-20 74.4 0.0 3.9e-20 72.8 0.0 2.0 1 0 0 1 1 1 1 GAF domain HATPase_c PF02518.21 gi|154150479|ref|YP_001404097.1| - 1.2e-12 47.5 0.0 2.7e-12 46.3 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_11 PF14598.1 gi|154150479|ref|YP_001404097.1| - 7.4e-11 41.9 0.0 0.0055 16.6 0.0 4.3 4 0 0 4 4 3 3 PAS domain HWE_HK PF07536.9 gi|154150479|ref|YP_001404097.1| - 2.8e-07 30.8 1.9 1.4e-06 28.6 0.4 2.6 2 0 0 2 2 2 1 HWE histidine kinase PAS_10 PF13596.1 gi|154150479|ref|YP_001404097.1| - 1.1e-06 28.8 0.1 0.0063 16.7 0.0 4.1 4 0 0 4 4 4 1 PAS domain GAF PF01590.21 gi|154150479|ref|YP_001404097.1| - 1.3e-05 25.4 0.0 0.0001 22.4 0.0 2.5 3 0 0 3 3 3 1 GAF domain HATPase_c_2 PF13581.1 gi|154150479|ref|YP_001404097.1| - 0.00045 19.9 0.0 0.0012 18.5 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain DUF87 PF01935.12 gi|154150480|ref|YP_001404098.1| - 4.9e-25 88.6 0.0 6.9e-25 88.1 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF87 AAA_10 PF12846.2 gi|154150480|ref|YP_001404098.1| - 3.6e-21 75.9 0.1 7.7e-20 71.5 0.1 2.1 1 1 0 1 1 1 1 AAA-like domain FtsK_SpoIIIE PF01580.13 gi|154150480|ref|YP_001404098.1| - 4.4e-05 23.0 0.5 0.00017 21.1 0.1 1.9 2 0 0 2 2 2 1 FtsK/SpoIIIE family TrwB_AAD_bind PF10412.4 gi|154150480|ref|YP_001404098.1| - 0.00021 20.0 0.0 0.00046 18.9 0.0 1.5 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain DUF853 PF05872.7 gi|154150480|ref|YP_001404098.1| - 0.0014 17.0 0.3 0.011 14.1 0.0 2.2 2 1 0 2 2 2 1 Bacterial protein of unknown function (DUF853) Zot PF05707.7 gi|154150480|ref|YP_001404098.1| - 0.011 15.1 0.0 0.019 14.4 0.0 1.4 1 0 0 1 1 1 0 Zonular occludens toxin (Zot) NurA PF09376.5 gi|154150481|ref|YP_001404099.1| - 6.5e-12 45.4 0.0 1.5e-10 41.0 0.0 2.0 1 1 0 1 1 1 1 NurA domain SMC_N PF02463.14 gi|154150482|ref|YP_001404100.1| - 1.7e-20 73.2 0.0 5.2e-20 71.6 0.0 1.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.1 gi|154150482|ref|YP_001404100.1| - 3.7e-11 43.7 41.7 4.5e-07 30.3 28.9 4.3 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.1 gi|154150482|ref|YP_001404100.1| - 2.2e-08 33.6 0.4 4e-06 26.1 0.0 2.3 2 0 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.1 gi|154150482|ref|YP_001404100.1| - 6.9e-07 28.7 0.0 1.5e-06 27.6 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_21 PF13304.1 gi|154150482|ref|YP_001404100.1| - 1.4e-06 28.4 0.5 0.0083 16.1 0.0 2.2 2 0 0 2 2 2 2 AAA domain SbcCD_C PF13558.1 gi|154150482|ref|YP_001404100.1| - 1.6e-06 27.9 0.1 6.1e-06 26.0 0.1 2.1 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_27 PF13514.1 gi|154150482|ref|YP_001404100.1| - 0.00026 18.8 1.6 0.00026 18.8 1.1 4.5 2 2 3 5 5 5 2 AAA domain DUF2813 PF11398.3 gi|154150482|ref|YP_001404100.1| - 0.0013 17.8 0.0 0.0058 15.7 0.0 2.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2813) ABC_tran PF00005.22 gi|154150482|ref|YP_001404100.1| - 0.0062 16.8 7.2 0.016 15.4 0.1 4.1 3 2 1 4 4 4 1 ABC transporter DUF258 PF03193.11 gi|154150482|ref|YP_001404100.1| - 0.09 11.9 0.0 0.27 10.4 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function, DUF258 Metallophos_2 PF12850.2 gi|154150483|ref|YP_001404101.1| - 8.5e-17 61.4 0.2 1.4e-16 60.6 0.1 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|154150483|ref|YP_001404101.1| - 6.2e-10 38.7 0.3 2.9e-09 36.6 0.0 1.9 2 0 0 2 2 2 1 Calcineurin-like phosphoesterase CbiK PF06180.6 gi|154150483|ref|YP_001404101.1| - 0.023 13.7 0.0 0.037 13.1 0.0 1.3 1 0 0 1 1 1 0 Cobalt chelatase (CbiK) Hydrolase PF00702.21 gi|154150483|ref|YP_001404101.1| - 0.029 14.7 0.0 0.063 13.6 0.0 1.6 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase DUF1355 PF07090.6 gi|154150483|ref|YP_001404101.1| - 0.11 11.8 0.0 0.85 8.9 0.0 2.4 2 1 1 3 3 3 0 Protein of unknown function (DUF1355) Hydrolase_6 PF13344.1 gi|154150483|ref|YP_001404101.1| - 0.11 12.3 0.0 0.35 10.7 0.0 1.8 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase PIN PF01850.16 gi|154150485|ref|YP_001404103.1| - 3.2e-05 24.2 0.2 4.2e-05 23.8 0.1 1.2 1 0 0 1 1 1 1 PIN domain NTP_transf_2 PF01909.18 gi|154150486|ref|YP_001404104.1| - 4.6e-14 52.5 0.3 5.5e-14 52.2 0.2 1.1 1 0 0 1 1 1 1 Nucleotidyltransferase domain DUF294 PF03445.8 gi|154150486|ref|YP_001404104.1| - 0.047 13.3 0.0 0.054 13.1 0.0 1.2 1 0 0 1 1 1 0 Putative nucleotidyltransferase DUF294 dCMP_cyt_deam_1 PF00383.17 gi|154150488|ref|YP_001404106.1| - 1.4e-19 69.6 0.0 1.8e-19 69.2 0.0 1.1 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region Bd3614-deam PF14439.1 gi|154150488|ref|YP_001404106.1| - 0.00019 21.2 0.7 0.057 13.2 0.1 2.2 1 1 1 2 2 2 2 Bd3614-like deaminase MafB19-deam PF14437.1 gi|154150488|ref|YP_001404106.1| - 0.012 15.2 0.0 0.019 14.5 0.0 1.3 1 0 0 1 1 1 0 MafB19-like deaminase APOBEC_N PF08210.6 gi|154150488|ref|YP_001404106.1| - 0.021 14.4 0.0 0.031 13.9 0.0 1.2 1 0 0 1 1 1 0 APOBEC-like N-terminal domain XOO_2897-deam PF14440.1 gi|154150488|ref|YP_001404106.1| - 0.028 14.1 0.0 0.038 13.6 0.0 1.3 1 0 0 1 1 1 0 Xanthomonas XOO_2897-like deaminase HxlR PF01638.12 gi|154150489|ref|YP_001404107.1| - 2.8e-35 119.8 0.1 3.5e-35 119.5 0.0 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_12 PF08461.5 gi|154150489|ref|YP_001404107.1| - 0.0015 18.2 0.1 0.0026 17.4 0.0 1.5 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain PadR PF03551.9 gi|154150489|ref|YP_001404107.1| - 0.0038 16.9 0.1 0.0068 16.1 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_45 PF14947.1 gi|154150489|ref|YP_001404107.1| - 0.0081 15.9 0.0 0.011 15.5 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_34 PF13601.1 gi|154150489|ref|YP_001404107.1| - 0.0096 15.9 0.0 0.014 15.4 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR PF01047.17 gi|154150489|ref|YP_001404107.1| - 0.027 14.1 0.1 0.04 13.6 0.1 1.3 1 0 0 1 1 1 0 MarR family DUF505 PF04458.7 gi|154150489|ref|YP_001404107.1| - 0.06 11.4 0.1 0.065 11.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF505) Replic_Relax PF13814.1 gi|154150489|ref|YP_001404107.1| - 0.093 12.5 0.0 0.12 12.2 0.0 1.1 1 0 0 1 1 1 0 Replication-relaxation HTH_CodY PF08222.6 gi|154150489|ref|YP_001404107.1| - 0.12 11.7 0.0 0.19 11.0 0.0 1.3 1 0 0 1 1 1 0 CodY helix-turn-helix domain DUF3116 PF11313.3 gi|154150489|ref|YP_001404107.1| - 0.13 11.8 0.0 0.17 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3116) MFS_1 PF07690.11 gi|154150490|ref|YP_001404108.1| - 2.4e-45 154.8 49.6 2.4e-45 154.8 34.4 2.1 1 1 1 2 2 2 1 Major Facilitator Superfamily FMN_red PF03358.10 gi|154150491|ref|YP_001404109.1| - 2.2e-25 88.9 0.0 2.7e-25 88.6 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|154150491|ref|YP_001404109.1| - 1.4e-07 31.2 0.0 2.1e-07 30.6 0.0 1.4 1 1 0 1 1 1 1 Flavodoxin-like fold Cupin_2 PF07883.6 gi|154150492|ref|YP_001404110.1| - 4.4e-12 45.3 2.1 6.7e-12 44.7 1.2 1.5 2 0 0 2 2 2 1 Cupin domain AraC_binding PF02311.14 gi|154150492|ref|YP_001404110.1| - 5.5e-07 29.3 0.9 7.2e-07 28.9 0.6 1.3 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_6 PF12852.2 gi|154150492|ref|YP_001404110.1| - 0.00017 21.2 0.1 0.00027 20.6 0.1 1.3 1 1 0 1 1 1 1 Cupin Cupin_1 PF00190.17 gi|154150492|ref|YP_001404110.1| - 0.00075 18.9 0.1 0.0011 18.4 0.1 1.3 1 0 0 1 1 1 1 Cupin Cupin_3 PF05899.7 gi|154150492|ref|YP_001404110.1| - 0.0097 15.2 0.1 0.033 13.5 0.0 1.8 1 1 1 2 2 2 1 Protein of unknown function (DUF861) Cupin_7 PF12973.2 gi|154150492|ref|YP_001404110.1| - 0.011 15.5 0.0 0.016 15.0 0.0 1.2 1 0 0 1 1 1 0 ChrR Cupin-like domain ARD PF03079.9 gi|154150492|ref|YP_001404110.1| - 0.019 14.9 0.1 0.028 14.3 0.1 1.2 1 0 0 1 1 1 0 ARD/ARD' family Flavodoxin_4 PF12682.2 gi|154150493|ref|YP_001404111.1| - 4.9e-52 175.4 0.0 5.5e-52 175.2 0.0 1.0 1 0 0 1 1 1 1 Flavodoxin Flavodoxin_3 PF12641.2 gi|154150493|ref|YP_001404111.1| - 0.0025 17.2 0.0 0.45 9.9 0.0 2.2 1 1 1 2 2 2 2 Flavodoxin domain Flavodoxin_2 PF02525.12 gi|154150493|ref|YP_001404111.1| - 0.0083 15.6 0.0 0.0086 15.6 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold FMN_red PF03358.10 gi|154150493|ref|YP_001404111.1| - 0.042 13.3 0.0 0.052 13.0 0.0 1.2 1 0 0 1 1 1 0 NADPH-dependent FMN reductase Aldo_ket_red PF00248.16 gi|154150494|ref|YP_001404112.1| - 7.6e-45 152.9 0.0 9.6e-45 152.5 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.1 gi|154150494|ref|YP_001404112.1| - 6.2e-12 45.6 7.7 1.3e-11 44.6 5.3 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|154150494|ref|YP_001404112.1| - 2.1e-09 37.4 8.1 4e-09 36.5 5.6 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|154150494|ref|YP_001404112.1| - 1.7e-07 31.1 7.3 3.1e-07 30.3 5.0 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|154150494|ref|YP_001404112.1| - 3.3e-07 30.6 1.1 0.0033 17.8 0.1 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|154150494|ref|YP_001404112.1| - 0.00013 21.6 9.2 0.00053 19.7 6.7 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|154150494|ref|YP_001404112.1| - 0.00071 20.2 3.1 0.071 13.8 0.2 2.6 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4 PF00037.22 gi|154150494|ref|YP_001404112.1| - 0.0011 18.4 2.8 0.0011 18.4 1.9 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_20 PF14691.1 gi|154150494|ref|YP_001404112.1| - 0.008 15.7 3.4 0.028 14.0 0.1 2.2 2 0 0 2 2 2 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_21 PF14697.1 gi|154150494|ref|YP_001404112.1| - 0.0099 15.7 6.7 0.87 9.4 0.3 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|154150494|ref|YP_001404112.1| - 0.024 14.5 1.4 0.024 14.5 1.0 2.3 2 0 0 2 2 1 0 4Fe-4S binding domain Fer4_4 PF12800.2 gi|154150494|ref|YP_001404112.1| - 1.1 9.7 13.6 0.92 10.0 2.6 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_7 PF12838.2 gi|154150494|ref|YP_001404112.1| - 1.6 9.1 14.8 1.4 9.3 2.9 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|154150494|ref|YP_001404112.1| - 5.2 7.2 14.1 2.2 8.3 2.6 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain HTH_Crp_2 PF13545.1 gi|154150495|ref|YP_001404113.1| - 0.0052 16.5 0.9 0.024 14.4 0.0 2.2 2 1 1 3 3 3 1 Crp-like helix-turn-helix domain HTH_23 PF13384.1 gi|154150495|ref|YP_001404113.1| - 0.0096 15.5 0.0 0.021 14.4 0.0 1.6 1 0 0 1 1 1 1 Homeodomain-like domain DUF2481 PF10654.4 gi|154150495|ref|YP_001404113.1| - 0.019 14.6 0.0 0.027 14.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2481) HTH_Tnp_4 PF13613.1 gi|154150495|ref|YP_001404113.1| - 0.047 13.2 0.0 0.087 12.3 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease HTH_11 PF08279.7 gi|154150495|ref|YP_001404113.1| - 0.067 12.8 0.1 0.23 11.1 0.0 2.0 2 1 0 2 2 2 0 HTH domain NADH-G_4Fe-4S_3 PF10588.4 gi|154150495|ref|YP_001404113.1| - 0.2 10.8 0.8 0.6 9.3 0.6 1.8 1 1 0 1 1 1 0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DUF1673 PF07895.6 gi|154150496|ref|YP_001404114.1| - 0.0019 17.7 0.0 0.0084 15.6 0.0 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF1673) DUF2244 PF10003.4 gi|154150496|ref|YP_001404114.1| - 0.45 9.8 7.8 7.4 5.9 3.1 2.1 2 0 0 2 2 2 0 Integral membrane protein (DUF2244) DUF202 PF02656.10 gi|154150496|ref|YP_001404114.1| - 0.47 10.7 11.6 2.4 8.4 0.3 3.7 1 1 1 2 2 2 0 Domain of unknown function (DUF202) DUF4131 PF13567.1 gi|154150496|ref|YP_001404114.1| - 2.4 7.5 17.2 0.073 12.4 5.7 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) FA_desaturase PF00487.19 gi|154150496|ref|YP_001404114.1| - 5.4 6.3 11.9 22 4.3 8.3 1.8 1 1 0 1 1 1 0 Fatty acid desaturase FMN_red PF03358.10 gi|154150497|ref|YP_001404115.1| - 5.5e-23 81.1 0.0 4.5e-22 78.2 0.0 1.9 1 1 1 2 2 2 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|154150497|ref|YP_001404115.1| - 2.3e-15 56.6 0.0 2.7e-15 56.3 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.2 gi|154150497|ref|YP_001404115.1| - 0.0021 18.0 0.0 0.0035 17.3 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin domain Radical_SAM PF04055.16 gi|154150498|ref|YP_001404116.1| - 9.1e-23 81.2 0.0 1.4e-22 80.6 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.1 gi|154150498|ref|YP_001404116.1| - 1e-11 45.0 0.0 1.7e-11 44.4 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|154150498|ref|YP_001404116.1| - 8.4e-11 41.9 0.0 1.6e-10 41.0 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain SPASM PF13186.1 gi|154150498|ref|YP_001404116.1| - 6.3e-08 32.8 0.1 1.8e-07 31.3 0.0 1.8 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Hydrolase PF00702.21 gi|154150498|ref|YP_001404116.1| - 0.01 16.2 0.1 5.7 7.2 0.0 2.8 1 1 2 3 3 3 2 haloacid dehalogenase-like hydrolase HTH_AsnC-type PF13404.1 gi|154150499|ref|YP_001404117.1| - 8.7e-12 44.3 0.1 7.1e-11 41.4 0.0 2.5 3 0 0 3 3 3 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.1 gi|154150499|ref|YP_001404117.1| - 1.1e-05 24.6 2.5 7.5e-05 22.0 0.3 3.0 3 1 0 3 3 3 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.2 gi|154150499|ref|YP_001404117.1| - 0.0012 18.4 0.1 0.0023 17.5 0.1 1.4 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|154150499|ref|YP_001404117.1| - 0.14 12.5 0.0 1.7 8.9 0.0 2.1 2 0 0 2 2 2 0 Winged helix DNA-binding domain DUF3562 PF12085.3 gi|154150499|ref|YP_001404117.1| - 0.18 11.6 0.8 0.62 9.9 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3562) HTH_AsnC-type PF13404.1 gi|154150500|ref|YP_001404118.1| - 1.5e-06 27.5 0.6 3.4e-06 26.4 0.1 1.9 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.1 gi|154150500|ref|YP_001404118.1| - 0.00034 19.9 5.0 0.00084 18.6 1.7 2.4 2 1 0 2 2 2 1 Winged helix-turn-helix DNA-binding Radical_SAM PF04055.16 gi|154150501|ref|YP_001404119.1| - 2.3e-21 76.6 0.0 4.1e-21 75.8 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily SPASM PF13186.1 gi|154150501|ref|YP_001404119.1| - 1.9e-06 28.1 1.7 4e-06 27.0 1.2 1.6 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.1 gi|154150501|ref|YP_001404119.1| - 6.7e-06 26.2 0.0 1.2e-05 25.4 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|154150501|ref|YP_001404119.1| - 6.2e-05 23.0 0.0 0.00014 21.8 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Glyco_transf_28 PF03033.15 gi|154150501|ref|YP_001404119.1| - 0.12 12.0 0.0 2.8 7.7 0.0 2.3 2 0 0 2 2 2 0 Glycosyltransferase family 28 N-terminal domain peroxidase PF00141.18 gi|154150502|ref|YP_001404120.1| - 1.6e-92 309.1 0.0 2.7e-49 167.7 0.0 2.3 2 0 0 2 2 2 2 Peroxidase Calici_coat_C PF08435.6 gi|154150504|ref|YP_001404122.1| - 0.039 13.2 0.0 0.055 12.7 0.0 1.2 1 0 0 1 1 1 0 Calicivirus coat protein C-terminal Y_Y_Y PF07495.8 gi|154150504|ref|YP_001404122.1| - 0.044 13.5 0.1 0.091 12.5 0.0 1.5 1 0 0 1 1 1 0 Y_Y_Y domain Peptidase_M64 PF09471.5 gi|154150507|ref|YP_001404125.1| - 0.0041 16.7 0.0 0.0098 15.5 0.0 1.5 2 0 0 2 2 2 1 IgA Peptidase M64 DUF4480 PF13715.1 gi|154150507|ref|YP_001404125.1| - 0.034 14.1 0.0 0.061 13.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4480) CBM_X PF06204.6 gi|154150507|ref|YP_001404125.1| - 0.058 12.8 0.0 0.22 11.0 0.0 1.9 2 0 0 2 2 2 0 Putative carbohydrate binding domain Response_reg PF00072.19 gi|154150508|ref|YP_001404126.1| - 4.6e-20 71.6 0.0 9.3e-20 70.7 0.0 1.5 1 0 0 1 1 1 1 Response regulator receiver domain DUF2769 PF10967.3 gi|154150509|ref|YP_001404127.1| - 8.9e-15 54.7 14.5 1.1e-14 54.4 10.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2769) Papo_T_antigen PF02380.10 gi|154150509|ref|YP_001404127.1| - 0.022 14.6 3.3 0.022 14.6 2.3 1.4 1 1 0 1 1 1 0 T-antigen specific domain Trehalase_Ca-bi PF07492.6 gi|154150509|ref|YP_001404127.1| - 0.06 12.6 0.0 0.089 12.1 0.0 1.2 1 0 0 1 1 1 0 Neutral trehalase Ca2+ binding domain FeoC PF09012.5 gi|154150511|ref|YP_001404129.1| - 0.0035 17.0 1.3 0.0086 15.7 0.9 1.7 1 1 0 1 1 1 1 FeoC like transcriptional regulator HTH_IclR PF09339.5 gi|154150511|ref|YP_001404129.1| - 0.007 15.9 0.0 0.0093 15.5 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_20 PF12840.2 gi|154150511|ref|YP_001404129.1| - 0.014 15.1 0.0 0.02 14.7 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_39 PF14090.1 gi|154150511|ref|YP_001404129.1| - 0.014 14.8 0.0 0.02 14.3 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_37 PF13744.1 gi|154150511|ref|YP_001404129.1| - 0.014 15.1 0.0 0.019 14.7 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain GSH_synth_ATP PF03917.12 gi|154150511|ref|YP_001404129.1| - 0.016 13.7 0.0 0.019 13.5 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic glutathione synthase, ATP binding domain HTH_28 PF13518.1 gi|154150511|ref|YP_001404129.1| - 0.026 14.5 0.0 0.034 14.1 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain FaeA PF04703.7 gi|154150511|ref|YP_001404129.1| - 0.029 14.5 0.0 0.042 14.0 0.0 1.2 1 0 0 1 1 1 0 FaeA-like protein HTH_23 PF13384.1 gi|154150511|ref|YP_001404129.1| - 0.041 13.5 0.0 0.05 13.2 0.0 1.2 1 0 0 1 1 1 0 Homeodomain-like domain Rrf2 PF02082.15 gi|154150511|ref|YP_001404129.1| - 0.078 13.1 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator HxlR PF01638.12 gi|154150511|ref|YP_001404129.1| - 0.093 12.3 0.0 0.36 10.5 0.0 1.7 2 0 0 2 2 2 0 HxlR-like helix-turn-helix HTH_AsnC-type PF13404.1 gi|154150511|ref|YP_001404129.1| - 0.1 12.1 0.1 0.15 11.6 0.1 1.2 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain Tmemb_185A PF10269.4 gi|154150512|ref|YP_001404130.1| - 0.00081 19.0 0.3 0.0011 18.6 0.2 1.2 1 0 0 1 1 1 1 Transmembrane Fragile-X-F protein TctB PF07331.6 gi|154150512|ref|YP_001404130.1| - 1.1 8.8 10.4 0.04 13.5 2.5 2.0 2 0 0 2 2 2 0 Tripartite tricarboxylate transporter TctB family DsbD_2 PF13386.1 gi|154150512|ref|YP_001404130.1| - 1.4 8.5 10.5 12 5.5 6.7 2.2 1 1 0 1 1 1 0 Cytochrome C biogenesis protein transmembrane region FeoB_N PF02421.13 gi|154150513|ref|YP_001404131.1| - 1.4e-66 222.6 0.1 2.2e-66 221.9 0.1 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B Gate PF07670.9 gi|154150513|ref|YP_001404131.1| - 6.7e-46 154.6 23.7 7.3e-30 103.0 4.0 2.8 3 0 0 3 3 2 2 Nucleoside recognition FeoB_C PF07664.7 gi|154150513|ref|YP_001404131.1| - 1e-20 72.8 3.4 1e-20 72.8 2.3 2.9 4 0 0 4 4 2 1 Ferrous iron transport protein B C terminus MMR_HSR1 PF01926.18 gi|154150513|ref|YP_001404131.1| - 9.3e-18 64.2 0.1 1.9e-17 63.2 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.5 gi|154150513|ref|YP_001404131.1| - 6.7e-05 22.1 0.0 0.00011 21.5 0.0 1.3 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit AIG1 PF04548.11 gi|154150513|ref|YP_001404131.1| - 0.0011 18.1 0.0 0.0016 17.5 0.0 1.2 1 0 0 1 1 1 1 AIG1 family Dynamin_N PF00350.18 gi|154150513|ref|YP_001404131.1| - 0.015 15.1 0.2 3.8 7.2 0.0 2.2 2 0 0 2 2 2 0 Dynamin family Arf PF00025.16 gi|154150513|ref|YP_001404131.1| - 0.083 12.1 0.0 0.14 11.3 0.0 1.4 1 0 0 1 1 1 0 ADP-ribosylation factor family ArgK PF03308.11 gi|154150513|ref|YP_001404131.1| - 0.14 10.9 0.1 4.4 5.9 0.0 2.2 1 1 1 2 2 2 0 ArgK protein Miro PF08477.8 gi|154150513|ref|YP_001404131.1| - 0.18 12.3 0.0 0.32 11.4 0.0 1.5 1 0 0 1 1 1 0 Miro-like protein GTP_EFTU PF00009.22 gi|154150513|ref|YP_001404131.1| - 0.22 10.9 0.1 6.9 6.0 0.1 2.5 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain DUF258 PF03193.11 gi|154150513|ref|YP_001404131.1| - 0.28 10.3 0.0 0.45 9.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF258 FeoA PF04023.9 gi|154150514|ref|YP_001404132.1| - 1.4e-17 63.3 0.1 1.6e-17 63.2 0.0 1.0 1 0 0 1 1 1 1 FeoA domain Abhydrolase_8 PF06259.7 gi|154150514|ref|YP_001404132.1| - 0.074 12.5 0.0 0.084 12.3 0.0 1.1 1 0 0 1 1 1 0 Alpha/beta hydrolase FeoA PF04023.9 gi|154150515|ref|YP_001404133.1| - 6.1e-13 48.5 0.0 7e-13 48.3 0.0 1.1 1 0 0 1 1 1 1 FeoA domain Fe_dep_repress PF01325.14 gi|154150516|ref|YP_001404134.1| - 3.9e-20 71.5 0.2 5.7e-20 71.0 0.1 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain Fe_dep_repr_C PF02742.10 gi|154150516|ref|YP_001404134.1| - 7.4e-14 51.2 0.2 1.7e-13 50.0 0.0 1.7 2 0 0 2 2 2 1 Iron dependent repressor, metal binding and dimerisation domain TrmB PF01978.14 gi|154150516|ref|YP_001404134.1| - 1.5e-05 24.6 0.1 2.6e-05 23.8 0.1 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.12 gi|154150516|ref|YP_001404134.1| - 3.9e-05 23.1 0.1 0.0002 20.8 0.1 1.9 1 1 0 1 1 1 1 TFIIE alpha subunit Rrf2 PF02082.15 gi|154150516|ref|YP_001404134.1| - 4.2e-05 23.5 0.0 7.1e-05 22.8 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator MarR_2 PF12802.2 gi|154150516|ref|YP_001404134.1| - 5.9e-05 22.6 0.0 0.00013 21.6 0.0 1.6 2 0 0 2 2 1 1 MarR family MarR PF01047.17 gi|154150516|ref|YP_001404134.1| - 0.00026 20.6 0.0 0.00046 19.8 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|154150516|ref|YP_001404134.1| - 0.00061 20.0 0.0 0.0015 18.8 0.0 1.7 1 1 0 1 1 1 1 Winged helix DNA-binding domain HTH_45 PF14947.1 gi|154150516|ref|YP_001404134.1| - 0.00091 18.9 0.1 0.0016 18.2 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DUF2250 PF10007.4 gi|154150516|ref|YP_001404134.1| - 0.0014 18.5 0.1 0.0022 17.8 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_6 PF01418.12 gi|154150516|ref|YP_001404134.1| - 0.0025 17.4 0.0 0.35 10.6 0.0 2.2 1 1 1 2 2 2 1 Helix-turn-helix domain, rpiR family HTH_Crp_2 PF13545.1 gi|154150516|ref|YP_001404134.1| - 0.0087 15.8 0.0 0.017 14.8 0.0 1.5 1 1 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_24 PF13412.1 gi|154150516|ref|YP_001404134.1| - 0.009 15.3 0.0 0.019 14.3 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.5 gi|154150516|ref|YP_001404134.1| - 0.015 14.8 0.0 0.03 13.9 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain HxlR PF01638.12 gi|154150516|ref|YP_001404134.1| - 0.015 14.9 0.0 0.029 14.0 0.0 1.5 1 1 0 1 1 1 0 HxlR-like helix-turn-helix EAP30 PF04157.11 gi|154150516|ref|YP_001404134.1| - 0.035 13.2 0.0 0.055 12.6 0.0 1.2 1 0 0 1 1 1 0 EAP30/Vps36 family HrcA_DNA-bdg PF03444.10 gi|154150516|ref|YP_001404134.1| - 0.057 12.8 0.0 1.9 7.9 0.0 2.1 1 1 1 2 2 2 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HTH_10 PF04967.7 gi|154150516|ref|YP_001404134.1| - 0.071 12.6 0.0 0.21 11.2 0.0 1.8 1 1 0 1 1 1 0 HTH DNA binding domain Topoisom_bac PF01131.15 gi|154150516|ref|YP_001404134.1| - 0.087 11.6 0.0 0.1 11.4 0.0 1.1 1 0 0 1 1 1 0 DNA topoisomerase RE_AlwI PF09491.5 gi|154150516|ref|YP_001404134.1| - 0.11 10.9 0.0 0.14 10.6 0.0 1.2 1 0 0 1 1 1 0 AlwI restriction endonuclease DUF4423 PF14394.1 gi|154150516|ref|YP_001404134.1| - 0.13 11.8 0.0 0.22 11.0 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4423) NicO PF03824.11 gi|154150518|ref|YP_001404136.1| - 4.8e-69 232.7 15.9 4.8e-69 232.7 11.0 1.6 2 0 0 2 2 2 1 High-affinity nickel-transport protein DUF1469 PF07332.6 gi|154150518|ref|YP_001404136.1| - 0.021 14.5 1.1 0.021 14.5 0.8 3.4 3 1 1 4 4 4 0 Protein of unknown function (DUF1469) Herpes_pp38 PF04846.8 gi|154150518|ref|YP_001404136.1| - 1.1 8.5 5.3 0.44 9.8 0.7 2.6 2 1 0 2 2 2 0 Herpesvirus pp38 phosphoprotein PgaD PF13994.1 gi|154150518|ref|YP_001404136.1| - 3.7 7.0 5.8 7.5 6.0 0.4 2.6 2 0 0 2 2 2 0 PgaD-like protein HTH_24 PF13412.1 gi|154150519|ref|YP_001404137.1| - 6.3e-09 35.0 0.0 2.6e-08 33.1 0.0 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.2 gi|154150519|ref|YP_001404137.1| - 1.4e-08 34.2 0.0 3.1e-08 33.1 0.0 1.5 1 0 0 1 1 1 1 MarR family MarR PF01047.17 gi|154150519|ref|YP_001404137.1| - 9.7e-07 28.4 0.0 2.7e-06 26.9 0.0 1.7 2 0 0 2 2 2 1 MarR family HTH_11 PF08279.7 gi|154150519|ref|YP_001404137.1| - 0.00014 21.4 0.0 0.00036 20.1 0.0 1.7 1 0 0 1 1 1 1 HTH domain HTH_Crp_2 PF13545.1 gi|154150519|ref|YP_001404137.1| - 0.00017 21.3 0.0 0.00039 20.1 0.0 1.6 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_27 PF13463.1 gi|154150519|ref|YP_001404137.1| - 0.00028 21.1 0.0 0.00062 20.0 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_3 PF01381.17 gi|154150519|ref|YP_001404137.1| - 0.001 18.8 0.0 0.0035 17.1 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix HTH_45 PF14947.1 gi|154150519|ref|YP_001404137.1| - 0.0013 18.4 0.0 0.0024 17.6 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_5 PF01022.15 gi|154150519|ref|YP_001404137.1| - 0.0016 18.1 0.0 0.0028 17.2 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_IclR PF09339.5 gi|154150519|ref|YP_001404137.1| - 0.0018 17.8 0.0 0.0028 17.2 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain TrmB PF01978.14 gi|154150519|ref|YP_001404137.1| - 0.0026 17.4 0.0 0.017 14.8 0.0 2.1 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Fe_dep_repress PF01325.14 gi|154150519|ref|YP_001404137.1| - 0.0044 16.9 0.2 0.012 15.5 0.0 1.8 2 0 0 2 2 1 1 Iron dependent repressor, N-terminal DNA binding domain Rrf2 PF02082.15 gi|154150519|ref|YP_001404137.1| - 0.016 15.3 0.0 0.029 14.4 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator EAP30 PF04157.11 gi|154150519|ref|YP_001404137.1| - 0.02 14.0 0.0 0.033 13.3 0.0 1.3 1 0 0 1 1 1 0 EAP30/Vps36 family HTH_10 PF04967.7 gi|154150519|ref|YP_001404137.1| - 0.028 14.0 0.1 0.091 12.3 0.0 1.8 2 0 0 2 2 2 0 HTH DNA binding domain HTH_38 PF13936.1 gi|154150519|ref|YP_001404137.1| - 0.029 13.9 0.0 0.068 12.7 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain Mnd1 PF03962.10 gi|154150519|ref|YP_001404137.1| - 0.029 14.0 0.0 0.043 13.4 0.0 1.2 1 0 0 1 1 1 0 Mnd1 family HTH_20 PF12840.2 gi|154150519|ref|YP_001404137.1| - 0.067 13.0 0.0 0.2 11.4 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_23 PF13384.1 gi|154150519|ref|YP_001404137.1| - 0.085 12.5 0.0 0.23 11.1 0.0 1.7 1 0 0 1 1 1 0 Homeodomain-like domain GntR PF00392.16 gi|154150519|ref|YP_001404137.1| - 0.11 11.9 0.0 0.24 10.8 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_29 PF13551.1 gi|154150519|ref|YP_001404137.1| - 0.12 12.5 0.0 0.21 11.7 0.0 1.5 1 1 0 1 1 1 0 Winged helix-turn helix HxlR PF01638.12 gi|154150520|ref|YP_001404138.1| - 2.1e-17 62.5 0.0 2.5e-17 62.2 0.0 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_34 PF13601.1 gi|154150520|ref|YP_001404138.1| - 0.0016 18.4 0.0 0.0023 17.9 0.0 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR PF01047.17 gi|154150520|ref|YP_001404138.1| - 0.0017 18.0 0.0 0.0031 17.1 0.0 1.4 1 0 0 1 1 1 1 MarR family PadR PF03551.9 gi|154150520|ref|YP_001404138.1| - 0.0023 17.6 0.0 0.0031 17.2 0.0 1.2 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family DUF4393 PF14337.1 gi|154150520|ref|YP_001404138.1| - 0.011 15.2 0.0 0.013 14.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4393) DUF505 PF04458.7 gi|154150520|ref|YP_001404138.1| - 0.013 13.6 0.0 0.015 13.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF505) HTH_20 PF12840.2 gi|154150520|ref|YP_001404138.1| - 0.048 13.4 0.0 0.095 12.5 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_45 PF14947.1 gi|154150520|ref|YP_001404138.1| - 0.11 12.3 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix Cation_efflux PF01545.16 gi|154150521|ref|YP_001404139.1| - 8.9e-62 208.7 10.9 9.9e-62 208.5 7.6 1.0 1 0 0 1 1 1 1 Cation efflux family KRE9 PF05390.6 gi|154150522|ref|YP_001404140.1| - 0.086 13.1 0.0 0.11 12.8 0.0 1.3 1 0 0 1 1 1 0 Yeast cell wall synthesis protein KRE9/KNH1 DUF1628 PF07790.6 gi|154150523|ref|YP_001404141.1| - 1.3e-25 89.8 3.0 2.6e-25 88.9 2.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1628) DUF1628 PF07790.6 gi|154150524|ref|YP_001404142.1| - 1.5e-25 89.7 1.3 4e-25 88.3 0.9 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF1628) DUF4352 PF11611.3 gi|154150524|ref|YP_001404142.1| - 0.0023 18.0 0.0 0.016 15.3 0.0 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF4352) DUF1345 PF07077.6 gi|154150524|ref|YP_001404142.1| - 0.011 15.2 0.0 0.017 14.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1345) Peripla_BP_2 PF01497.13 gi|154150526|ref|YP_001404144.1| - 3.4e-46 157.3 0.3 3.4e-46 157.3 0.2 1.4 2 0 0 2 2 2 1 Periplasmic binding protein DsrH PF04077.7 gi|154150526|ref|YP_001404144.1| - 0.052 13.2 0.3 0.17 11.5 0.1 1.9 2 0 0 2 2 2 0 DsrH like protein DUF217 PF02697.9 gi|154150527|ref|YP_001404145.1| - 2e-22 79.2 1.3 2.2e-22 79.0 0.9 1.0 1 0 0 1 1 1 1 Uncharacterized ACR, COG1753 PA28_beta PF02252.13 gi|154150527|ref|YP_001404145.1| - 0.0078 15.6 0.1 0.0088 15.5 0.1 1.2 1 0 0 1 1 1 1 Proteasome activator pa28 beta subunit RHH_1 PF01402.16 gi|154150527|ref|YP_001404145.1| - 0.055 13.3 0.1 0.16 11.9 0.1 1.7 1 0 0 1 1 1 0 Ribbon-helix-helix protein, copG family DUF1241 PF06840.6 gi|154150527|ref|YP_001404145.1| - 0.086 12.0 0.2 0.089 12.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1241) RHH_3 PF12651.2 gi|154150527|ref|YP_001404145.1| - 0.28 10.9 0.2 0.28 10.9 0.1 1.9 3 0 0 3 3 3 0 Ribbon-helix-helix domain PIN PF01850.16 gi|154150528|ref|YP_001404146.1| - 5.1e-15 55.8 0.0 5.8e-15 55.6 0.0 1.0 1 0 0 1 1 1 1 PIN domain FecCD PF01032.13 gi|154150529|ref|YP_001404147.1| - 1.1e-90 303.6 36.7 1.3e-90 303.3 25.4 1.1 1 0 0 1 1 1 1 FecCD transport family ABC-3 PF00950.12 gi|154150529|ref|YP_001404147.1| - 9e-06 25.1 20.5 1.5e-05 24.4 14.2 1.4 1 0 0 1 1 1 1 ABC 3 transport family BofA PF07441.6 gi|154150529|ref|YP_001404147.1| - 0.071 13.1 0.3 0.071 13.1 0.2 4.4 5 1 0 5 5 5 0 SigmaK-factor processing regulatory protein BofA ABC_tran PF00005.22 gi|154150530|ref|YP_001404148.1| - 5.3e-28 98.0 0.0 7.4e-28 97.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|154150530|ref|YP_001404148.1| - 1.5e-09 38.2 0.5 3.6e-06 27.1 0.0 2.1 2 0 0 2 2 2 2 AAA domain SMC_N PF02463.14 gi|154150530|ref|YP_001404148.1| - 1.9e-07 30.5 0.6 1.1e-05 24.7 0.4 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.1 gi|154150530|ref|YP_001404148.1| - 6.2e-06 26.3 1.4 0.00015 21.8 1.0 2.1 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|154150530|ref|YP_001404148.1| - 5e-05 22.7 0.2 0.0001 21.7 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.1 gi|154150530|ref|YP_001404148.1| - 0.00013 21.9 0.2 0.00035 20.6 0.2 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_19 PF13245.1 gi|154150530|ref|YP_001404148.1| - 0.00014 21.5 0.1 0.00037 20.1 0.1 1.8 1 0 0 1 1 1 1 Part of AAA domain AAA_23 PF13476.1 gi|154150530|ref|YP_001404148.1| - 0.00047 20.5 0.1 0.00084 19.7 0.1 1.3 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.1 gi|154150530|ref|YP_001404148.1| - 0.00096 18.7 0.0 0.0019 17.8 0.0 1.4 2 0 0 2 2 1 1 AAA domain AAA_17 PF13207.1 gi|154150530|ref|YP_001404148.1| - 0.001 19.8 0.3 0.0019 19.0 0.2 1.9 1 1 0 1 1 1 1 AAA domain AAA_10 PF12846.2 gi|154150530|ref|YP_001404148.1| - 0.001 18.5 0.1 0.051 12.9 0.0 2.2 2 0 0 2 2 2 1 AAA-like domain AAA_14 PF13173.1 gi|154150530|ref|YP_001404148.1| - 0.0016 18.3 0.0 0.011 15.6 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.1 gi|154150530|ref|YP_001404148.1| - 0.003 16.6 0.3 0.2 10.6 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain Zeta_toxin PF06414.7 gi|154150530|ref|YP_001404148.1| - 0.0037 16.4 0.1 0.13 11.3 0.0 2.1 2 0 0 2 2 2 1 Zeta toxin T2SE PF00437.15 gi|154150530|ref|YP_001404148.1| - 0.0041 16.0 0.1 0.0071 15.2 0.1 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein NACHT PF05729.7 gi|154150530|ref|YP_001404148.1| - 0.0064 16.1 0.0 0.012 15.2 0.0 1.4 1 0 0 1 1 1 1 NACHT domain NB-ARC PF00931.17 gi|154150530|ref|YP_001404148.1| - 0.0076 15.1 0.1 0.012 14.5 0.0 1.3 1 0 0 1 1 1 1 NB-ARC domain Arch_ATPase PF01637.13 gi|154150530|ref|YP_001404148.1| - 0.0079 15.9 0.0 0.014 15.1 0.0 1.4 1 0 0 1 1 1 1 Archaeal ATPase Rad17 PF03215.10 gi|154150530|ref|YP_001404148.1| - 0.0079 14.9 0.0 0.028 13.1 0.0 1.7 2 0 0 2 2 2 1 Rad17 cell cycle checkpoint protein ArgK PF03308.11 gi|154150530|ref|YP_001404148.1| - 0.0083 14.9 0.1 0.014 14.1 0.1 1.3 1 0 0 1 1 1 1 ArgK protein PIF1 PF05970.9 gi|154150530|ref|YP_001404148.1| - 0.0087 15.0 0.0 0.015 14.2 0.0 1.3 1 0 0 1 1 1 1 PIF1-like helicase MobB PF03205.9 gi|154150530|ref|YP_001404148.1| - 0.0094 15.6 0.1 0.019 14.6 0.1 1.5 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B Mg_chelatase PF01078.16 gi|154150530|ref|YP_001404148.1| - 0.012 14.7 0.0 0.025 13.7 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI NTPase_1 PF03266.10 gi|154150530|ref|YP_001404148.1| - 0.015 15.0 0.1 0.027 14.1 0.0 1.6 2 0 0 2 2 1 0 NTPase AAA_18 PF13238.1 gi|154150530|ref|YP_001404148.1| - 0.017 15.4 0.1 0.061 13.6 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.1 gi|154150530|ref|YP_001404148.1| - 0.018 14.9 0.0 0.022 14.6 0.0 1.4 1 1 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.12 gi|154150530|ref|YP_001404148.1| - 0.019 14.4 0.0 0.057 12.9 0.0 1.7 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein cobW PF02492.14 gi|154150530|ref|YP_001404148.1| - 0.023 14.1 0.0 0.047 13.1 0.0 1.6 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_5 PF07728.9 gi|154150530|ref|YP_001404148.1| - 0.025 14.2 0.0 0.085 12.5 0.0 1.8 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_24 PF13479.1 gi|154150530|ref|YP_001404148.1| - 0.028 14.0 0.2 0.054 13.0 0.1 1.4 1 0 0 1 1 1 0 AAA domain ATP-synt_ab PF00006.20 gi|154150530|ref|YP_001404148.1| - 0.029 13.8 0.1 0.05 13.0 0.1 1.3 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA PF00004.24 gi|154150530|ref|YP_001404148.1| - 0.03 14.5 0.1 0.28 11.3 0.0 2.2 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) RecA PF00154.16 gi|154150530|ref|YP_001404148.1| - 0.061 12.3 0.0 0.092 11.7 0.0 1.2 1 0 0 1 1 1 0 recA bacterial DNA recombination protein SbcCD_C PF13558.1 gi|154150530|ref|YP_001404148.1| - 0.081 12.8 0.0 0.34 10.8 0.0 1.9 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit UPF0079 PF02367.12 gi|154150530|ref|YP_001404148.1| - 0.15 11.7 0.1 0.26 10.9 0.1 1.4 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 AAA_28 PF13521.1 gi|154150530|ref|YP_001404148.1| - 0.21 11.5 0.6 0.4 10.6 0.2 1.6 2 0 0 2 2 1 0 AAA domain AP_endonuc_2 PF01261.19 gi|154150531|ref|YP_001404149.1| - 1.6e-15 56.9 0.8 2.2e-15 56.5 0.5 1.2 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel DUF2769 PF10967.3 gi|154150533|ref|YP_001404151.1| - 5.1e-17 61.9 13.4 6.5e-17 61.5 9.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2769) GATase PF00117.23 gi|154150534|ref|YP_001404152.1| - 2.5e-19 69.4 0.0 3e-19 69.2 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|154150534|ref|YP_001404152.1| - 7e-11 41.9 0.2 1.6e-09 37.5 0.1 2.1 1 1 0 1 1 1 1 Peptidase C26 GATase_3 PF07685.9 gi|154150534|ref|YP_001404152.1| - 0.00025 20.6 0.0 0.0053 16.3 0.0 2.1 1 1 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase_5 PF13507.1 gi|154150534|ref|YP_001404152.1| - 0.21 10.4 0.6 12 4.6 0.2 2.5 2 1 1 3 3 3 0 CobB/CobQ-like glutamine amidotransferase domain ATP_bind_4 PF01902.12 gi|154150535|ref|YP_001404153.1| - 2e-62 210.4 0.0 2.3e-62 210.2 0.0 1.0 1 0 0 1 1 1 1 ATP-binding region Asn_synthase PF00733.16 gi|154150535|ref|YP_001404153.1| - 0.13 11.6 0.0 0.16 11.4 0.0 1.3 1 1 0 1 1 1 0 Asparagine synthase FTR_C PF02741.10 gi|154150536|ref|YP_001404154.1| - 1e-57 194.1 0.2 1.9e-57 193.2 0.2 1.5 1 0 0 1 1 1 1 FTR, proximal lobe FTR PF01913.13 gi|154150536|ref|YP_001404154.1| - 3.8e-54 182.3 0.0 6.8e-54 181.4 0.0 1.4 1 0 0 1 1 1 1 Formylmethanofuran-tetrahydromethanopterin formyltransferase 5-FTHF_cyc-lig PF01812.15 gi|154150537|ref|YP_001404155.1| - 3.2e-36 124.8 0.0 3.6e-36 124.6 0.0 1.0 1 0 0 1 1 1 1 5-formyltetrahydrofolate cyclo-ligase family Methyltransf_11 PF08241.7 gi|154150538|ref|YP_001404156.1| - 9.2e-18 64.5 0.0 1.9e-17 63.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|154150538|ref|YP_001404156.1| - 2e-16 60.1 0.0 2.7e-16 59.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|154150538|ref|YP_001404156.1| - 4.5e-15 55.5 0.0 5.5e-15 55.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|154150538|ref|YP_001404156.1| - 7.2e-15 55.2 0.0 1.5e-14 54.2 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|154150538|ref|YP_001404156.1| - 1.3e-13 51.5 0.1 2.8e-13 50.4 0.0 1.6 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|154150538|ref|YP_001404156.1| - 9.5e-11 41.9 0.0 2.8e-10 40.4 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain TehB PF03848.9 gi|154150538|ref|YP_001404156.1| - 2.7e-09 36.4 0.0 3.4e-09 36.1 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB Ubie_methyltran PF01209.13 gi|154150538|ref|YP_001404156.1| - 8.1e-09 34.9 0.0 4.5e-08 32.5 0.0 1.8 1 1 0 2 2 2 1 ubiE/COQ5 methyltransferase family MTS PF05175.9 gi|154150538|ref|YP_001404156.1| - 7.3e-08 31.9 0.0 1.1e-07 31.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_26 PF13659.1 gi|154150538|ref|YP_001404156.1| - 1.5e-05 25.0 0.5 2.7e-05 24.1 0.1 1.6 2 0 0 2 2 2 1 Methyltransferase domain PrmA PF06325.8 gi|154150538|ref|YP_001404156.1| - 5e-05 22.5 0.0 6e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) RrnaAD PF00398.15 gi|154150538|ref|YP_001404156.1| - 7.5e-05 21.8 0.0 0.00011 21.3 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase FmrO PF07091.6 gi|154150538|ref|YP_001404156.1| - 0.00066 18.7 0.0 0.00092 18.2 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA methyltransferase (FmrO) MetW PF07021.7 gi|154150538|ref|YP_001404156.1| - 0.0012 18.2 0.0 0.0019 17.5 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_29 PF03141.11 gi|154150538|ref|YP_001404156.1| - 0.003 15.9 0.0 0.021 13.1 0.0 1.9 2 0 0 2 2 2 1 Putative S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_32 PF13679.1 gi|154150538|ref|YP_001404156.1| - 0.0036 16.9 0.0 0.0052 16.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.10 gi|154150538|ref|YP_001404156.1| - 0.0042 16.7 0.0 0.014 15.0 0.0 1.8 1 1 0 1 1 1 1 Hypothetical methyltransferase DREV PF05219.7 gi|154150538|ref|YP_001404156.1| - 0.023 13.5 0.0 0.035 12.9 0.0 1.3 1 0 0 1 1 1 0 DREV methyltransferase Cons_hypoth95 PF03602.10 gi|154150538|ref|YP_001404156.1| - 0.043 13.1 0.0 0.059 12.7 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical protein 95 Methyltransf_16 PF10294.4 gi|154150538|ref|YP_001404156.1| - 0.046 13.1 0.0 0.057 12.8 0.0 1.2 1 0 0 1 1 1 0 Putative methyltransferase Acetyltransf_4 PF13420.1 gi|154150539|ref|YP_001404157.1| - 7.7e-16 58.4 0.0 9e-16 58.1 0.0 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|154150539|ref|YP_001404157.1| - 9.2e-09 35.2 0.1 1.5e-08 34.5 0.0 1.6 1 1 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.1 gi|154150539|ref|YP_001404157.1| - 2.2e-06 27.9 0.0 3.1e-06 27.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.1 gi|154150539|ref|YP_001404157.1| - 2.4e-06 27.5 0.1 4.9e-06 26.6 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|154150539|ref|YP_001404157.1| - 0.0023 18.0 0.0 0.0033 17.5 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|154150539|ref|YP_001404157.1| - 0.011 15.4 0.0 0.021 14.5 0.0 1.4 1 0 0 1 1 1 0 FR47-like protein ABM PF03992.11 gi|154150540|ref|YP_001404158.1| - 9.9e-15 54.3 0.0 1.3e-14 53.9 0.0 1.2 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase MFS_1 PF07690.11 gi|154150541|ref|YP_001404159.1| - 5.9e-38 130.4 77.6 4.5e-35 120.9 34.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF4094 PF13334.1 gi|154150541|ref|YP_001404159.1| - 0.15 12.4 0.4 0.7 10.3 0.2 2.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) PAS_4 PF08448.5 gi|154150542|ref|YP_001404160.1| - 3.6e-16 59.1 0.0 6.3e-16 58.3 0.0 1.4 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.1 gi|154150542|ref|YP_001404160.1| - 1.6e-14 54.1 0.0 3.2e-14 53.1 0.0 1.6 1 0 0 1 1 1 1 PAS domain PAS PF00989.19 gi|154150542|ref|YP_001404160.1| - 1.7e-12 47.1 0.0 3.4e-12 46.1 0.0 1.6 1 0 0 1 1 1 1 PAS fold HATPase_c PF02518.21 gi|154150542|ref|YP_001404160.1| - 1.9e-08 33.9 0.0 5.2e-08 32.5 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.1 gi|154150542|ref|YP_001404160.1| - 4e-05 23.3 0.0 0.00012 21.7 0.0 1.9 1 0 0 1 1 1 1 PAS domain PAS_10 PF13596.1 gi|154150542|ref|YP_001404160.1| - 0.0033 17.6 0.0 0.006 16.8 0.0 1.4 1 0 0 1 1 1 1 PAS domain PAS_7 PF12860.2 gi|154150542|ref|YP_001404160.1| - 0.016 15.1 0.0 0.064 13.2 0.0 2.1 1 1 0 1 1 1 0 PAS fold PAS_3 PF08447.6 gi|154150542|ref|YP_001404160.1| - 0.086 12.9 0.0 0.21 11.6 0.0 1.7 1 0 0 1 1 1 0 PAS fold DUF904 PF06005.7 gi|154150542|ref|YP_001404160.1| - 0.35 11.1 4.9 0.87 9.9 3.4 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF904) FtsL PF04999.8 gi|154150542|ref|YP_001404160.1| - 1.2 8.9 3.9 1.9 8.2 0.5 2.7 3 0 0 3 3 3 0 Cell division protein FtsL TPR_11 PF13414.1 gi|154150543|ref|YP_001404161.1| - 9.4e-39 130.9 11.1 1.3e-10 40.8 0.5 5.2 3 1 2 5 5 5 5 TPR repeat TPR_1 PF00515.23 gi|154150543|ref|YP_001404161.1| - 2.3e-37 125.0 16.4 3.4e-07 29.5 0.0 7.9 8 0 0 8 8 8 6 Tetratricopeptide repeat TPR_2 PF07719.12 gi|154150543|ref|YP_001404161.1| - 8.3e-35 115.8 17.9 2.7e-07 29.9 0.8 8.1 8 0 0 8 8 8 7 Tetratricopeptide repeat TPR_16 PF13432.1 gi|154150543|ref|YP_001404161.1| - 1.4e-34 117.9 15.1 2.2e-09 37.7 0.3 5.4 3 1 2 5 5 5 5 Tetratricopeptide repeat TPR_14 PF13428.1 gi|154150543|ref|YP_001404161.1| - 2.2e-27 93.0 14.9 3.2e-05 24.1 0.7 8.3 2 2 6 8 8 8 7 Tetratricopeptide repeat TPR_17 PF13431.1 gi|154150543|ref|YP_001404161.1| - 5e-24 82.4 5.2 0.00018 21.4 0.0 9.1 9 0 0 9 9 9 5 Tetratricopeptide repeat TPR_19 PF14559.1 gi|154150543|ref|YP_001404161.1| - 3.4e-22 78.5 13.4 4.3e-06 26.9 0.4 5.0 2 2 4 6 6 6 6 Tetratricopeptide repeat TPR_8 PF13181.1 gi|154150543|ref|YP_001404161.1| - 6.8e-19 66.1 5.2 0.00045 19.7 0.0 7.2 8 0 0 8 8 8 4 Tetratricopeptide repeat TPR_12 PF13424.1 gi|154150543|ref|YP_001404161.1| - 1.1e-18 66.8 16.6 3.8e-05 23.5 0.4 5.7 2 2 3 5 5 5 4 Tetratricopeptide repeat TPR_7 PF13176.1 gi|154150543|ref|YP_001404161.1| - 9.2e-17 59.4 8.7 0.0013 18.3 0.2 7.0 7 0 0 7 7 7 5 Tetratricopeptide repeat TPR_9 PF13371.1 gi|154150543|ref|YP_001404161.1| - 2.1e-14 53.0 16.2 0.0002 21.1 0.0 5.2 2 2 2 5 5 5 3 Tetratricopeptide repeat Apc3 PF12895.2 gi|154150543|ref|YP_001404161.1| - 6.6e-13 48.6 7.8 4.6e-06 26.6 0.3 4.0 2 2 1 4 4 4 3 Anaphase-promoting complex, cyclosome, subunit 3 Fis1_TPR_C PF14853.1 gi|154150543|ref|YP_001404161.1| - 3.1e-10 39.7 2.3 0.13 12.1 0.0 5.7 3 1 2 5 5 5 2 Fis1 C-terminal tetratricopeptide repeat TPR_6 PF13174.1 gi|154150543|ref|YP_001404161.1| - 1.3e-08 34.6 7.6 4 8.1 0.0 7.0 7 0 0 7 7 7 2 Tetratricopeptide repeat TPR_10 PF13374.1 gi|154150543|ref|YP_001404161.1| - 1.4e-05 24.8 11.5 3.4 7.7 0.0 6.3 6 1 1 7 7 6 1 Tetratricopeptide repeat NARP1 PF12569.3 gi|154150543|ref|YP_001404161.1| - 2.7e-05 23.1 0.4 0.66 8.6 0.0 3.7 3 2 1 5 5 5 2 NMDA receptor-regulated protein 1 MIT PF04212.13 gi|154150543|ref|YP_001404161.1| - 0.0015 18.3 5.3 4.9 7.0 0.1 4.5 4 1 0 4 4 4 1 MIT (microtubule interacting and transport) domain TPR_3 PF07720.7 gi|154150543|ref|YP_001404161.1| - 0.0033 17.1 9.0 1.2 8.9 0.3 4.4 5 0 0 5 5 4 1 Tetratricopeptide repeat TPR_15 PF13429.1 gi|154150543|ref|YP_001404161.1| - 0.0034 16.4 2.0 2.8 6.9 0.1 3.9 2 2 1 4 4 4 1 Tetratricopeptide repeat BTAD PF03704.12 gi|154150543|ref|YP_001404161.1| - 0.011 15.9 2.9 1.9 8.8 0.0 3.5 4 0 0 4 4 3 0 Bacterial transcriptional activator domain PPR PF01535.15 gi|154150543|ref|YP_001404161.1| - 0.015 15.2 3.0 18 5.5 0.0 5.2 6 0 0 6 6 5 0 PPR repeat Alkyl_sulf_dimr PF14863.1 gi|154150543|ref|YP_001404161.1| - 0.038 14.2 0.4 0.12 12.5 0.0 1.9 2 0 0 2 2 2 0 Alkyl sulfatase dimerisation Coatomer_E PF04733.9 gi|154150543|ref|YP_001404161.1| - 0.055 12.6 0.1 12 4.9 0.0 2.6 3 0 0 3 3 3 0 Coatomer epsilon subunit TPR_21 PF09976.4 gi|154150543|ref|YP_001404161.1| - 0.11 12.4 6.2 3.3 7.6 0.0 3.4 4 0 0 4 4 3 0 Tetratricopeptide repeat SHNi-TPR PF10516.4 gi|154150543|ref|YP_001404161.1| - 0.12 11.6 0.0 37 3.6 0.0 3.6 4 0 0 4 4 4 0 SHNi-TPR CxxCxxCC PF03692.10 gi|154150545|ref|YP_001404163.1| - 0.00023 21.5 6.4 0.0026 18.2 4.4 2.2 1 1 0 1 1 1 1 Putative zinc- or iron-chelating domain MethyltransfD12 PF02086.10 gi|154150546|ref|YP_001404164.1| - 3.8e-58 196.9 0.0 4.3e-58 196.8 0.0 1.0 1 0 0 1 1 1 1 D12 class N6 adenine-specific DNA methyltransferase Methyltransf_26 PF13659.1 gi|154150546|ref|YP_001404164.1| - 0.0018 18.2 0.4 0.0048 16.9 0.3 1.7 1 1 0 1 1 1 1 Methyltransferase domain Acetyltransf_6 PF13480.1 gi|154150546|ref|YP_001404164.1| - 0.11 12.4 0.3 0.38 10.7 0.0 1.9 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain Neur_chan_LBD PF02931.18 gi|154150548|ref|YP_001404166.1| - 0.11 11.5 0.0 0.52 9.4 0.0 1.9 2 0 0 2 2 2 0 Neurotransmitter-gated ion-channel ligand binding domain DUF1624 PF07786.7 gi|154150549|ref|YP_001404167.1| - 2.8e-20 72.6 17.2 4.5e-18 65.4 7.7 2.5 1 1 1 2 2 2 2 Protein of unknown function (DUF1624) Acyl_transf_3 PF01757.17 gi|154150549|ref|YP_001404167.1| - 8.6e-08 31.3 41.6 1.2e-05 24.3 28.9 2.2 1 1 0 1 1 1 1 Acyltransferase family DUF418 PF04235.7 gi|154150549|ref|YP_001404167.1| - 0.0051 16.4 5.0 0.0051 16.4 3.5 2.2 2 1 1 3 3 3 1 Protein of unknown function (DUF418) UCR_TM PF02921.9 gi|154150549|ref|YP_001404167.1| - 0.0064 16.7 0.0 0.021 15.0 0.0 1.8 1 0 0 1 1 1 1 Ubiquinol cytochrome reductase transmembrane region Response_reg PF00072.19 gi|154150550|ref|YP_001404168.1| - 7.9e-20 70.9 0.0 1.4e-19 70.0 0.0 1.4 1 0 0 1 1 1 1 Response regulator receiver domain GAF_2 PF13185.1 gi|154150550|ref|YP_001404168.1| - 1.6e-07 31.9 0.1 4.1e-07 30.5 0.0 1.6 2 0 0 2 2 2 1 GAF domain GAF PF01590.21 gi|154150550|ref|YP_001404168.1| - 9.8e-07 29.0 0.0 2.4e-06 27.7 0.0 1.6 1 1 0 2 2 2 1 GAF domain GAF_3 PF13492.1 gi|154150550|ref|YP_001404168.1| - 3.3e-05 24.0 0.0 8.2e-05 22.7 0.0 1.8 2 1 0 2 2 2 1 GAF domain HisKA_2 PF07568.7 gi|154150551|ref|YP_001404169.1| - 2e-29 101.2 0.1 4e-29 100.2 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase HATPase_c PF02518.21 gi|154150551|ref|YP_001404169.1| - 5e-15 55.1 0.0 3.2e-13 49.3 0.0 2.4 1 1 1 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HWE_HK PF07536.9 gi|154150551|ref|YP_001404169.1| - 6.4e-07 29.7 0.9 2.6e-05 24.5 0.0 2.3 2 0 0 2 2 2 1 HWE histidine kinase HATPase_c_2 PF13581.1 gi|154150551|ref|YP_001404169.1| - 2e-05 24.3 0.0 3.6e-05 23.5 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.1 gi|154150551|ref|YP_001404169.1| - 0.034 13.8 0.0 0.086 12.4 0.0 1.6 2 0 0 2 2 2 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TraQ PF09679.5 gi|154150551|ref|YP_001404169.1| - 0.047 13.6 0.3 0.17 11.8 0.0 2.1 2 0 0 2 2 2 0 Type-F conjugative transfer system pilin chaperone (TraQ) DUF2759 PF10958.3 gi|154150551|ref|YP_001404169.1| - 0.15 11.6 2.9 0.28 10.7 0.4 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2759) AA_permease_2 PF13520.1 gi|154150552|ref|YP_001404170.1| - 8.1e-56 189.3 55.8 1e-55 189.0 38.7 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.16 gi|154150552|ref|YP_001404170.1| - 4.3e-40 137.4 48.2 4.3e-40 137.4 33.4 1.3 1 1 0 1 1 1 1 Amino acid permease AA_permease_C PF13906.1 gi|154150552|ref|YP_001404170.1| - 1.9e-14 53.2 4.2 1.9e-14 53.2 2.9 4.3 4 1 1 5 5 5 1 C-terminus of AA_permease PrsW-protease PF13367.1 gi|154150554|ref|YP_001404172.1| - 1.6e-26 92.6 15.3 2.3e-26 92.1 10.6 1.1 1 0 0 1 1 1 1 Protease prsW family DUF2759 PF10958.3 gi|154150554|ref|YP_001404172.1| - 0.0085 15.6 0.9 0.043 13.4 0.6 2.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2759) HTH_20 PF12840.2 gi|154150555|ref|YP_001404173.1| - 1.1e-10 41.1 0.0 1.6e-10 40.6 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.15 gi|154150555|ref|YP_001404173.1| - 7.8e-06 25.4 0.0 1.6e-05 24.4 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.1 gi|154150555|ref|YP_001404173.1| - 2.6e-05 23.4 0.0 4e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.14 gi|154150555|ref|YP_001404173.1| - 0.00012 21.7 0.1 0.00029 20.4 0.1 1.6 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.17 gi|154150555|ref|YP_001404173.1| - 0.00033 20.2 0.0 0.00053 19.6 0.0 1.3 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.2 gi|154150555|ref|YP_001404173.1| - 0.00081 19.0 0.0 0.0015 18.1 0.0 1.3 1 0 0 1 1 1 1 MarR family FaeA PF04703.7 gi|154150555|ref|YP_001404173.1| - 0.0016 18.5 0.0 0.0029 17.7 0.0 1.4 1 0 0 1 1 1 1 FaeA-like protein LexA_DNA_bind PF01726.11 gi|154150555|ref|YP_001404173.1| - 0.0045 16.5 0.0 0.0084 15.6 0.0 1.4 1 0 0 1 1 1 1 LexA DNA binding domain HTH_IclR PF09339.5 gi|154150555|ref|YP_001404173.1| - 0.0046 16.5 0.0 0.0074 15.8 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain Rrf2 PF02082.15 gi|154150555|ref|YP_001404173.1| - 0.0051 16.8 0.0 0.0098 15.9 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator HTH_11 PF08279.7 gi|154150555|ref|YP_001404173.1| - 0.0064 16.1 0.0 0.011 15.3 0.0 1.3 1 0 0 1 1 1 1 HTH domain TFIIE_alpha PF02002.12 gi|154150555|ref|YP_001404173.1| - 0.011 15.2 0.1 0.015 14.8 0.0 1.1 1 0 0 1 1 1 0 TFIIE alpha subunit Sulfolobus_pRN PF05584.6 gi|154150555|ref|YP_001404173.1| - 0.011 15.6 0.0 0.017 15.1 0.0 1.2 1 0 0 1 1 1 0 Sulfolobus plasmid regulatory protein HTH_34 PF13601.1 gi|154150555|ref|YP_001404173.1| - 0.014 15.4 0.1 0.022 14.7 0.1 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_45 PF14947.1 gi|154150555|ref|YP_001404173.1| - 0.076 12.8 0.2 0.11 12.2 0.2 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix DUF2582 PF10771.4 gi|154150555|ref|YP_001404173.1| - 0.11 12.4 0.3 0.22 11.4 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2582) HTH_Mga PF08280.6 gi|154150555|ref|YP_001404173.1| - 0.11 12.2 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain CDC37_C PF08564.5 gi|154150555|ref|YP_001404173.1| - 0.15 11.9 0.0 0.51 10.2 0.0 1.7 1 1 1 2 2 2 0 Cdc37 C terminal domain Rhomboid PF01694.17 gi|154150556|ref|YP_001404174.1| - 0.0027 17.7 38.4 0.46 10.4 15.8 3.1 2 1 1 3 3 3 2 Rhomboid family Bax1-I PF01027.15 gi|154150556|ref|YP_001404174.1| - 1.2 8.7 39.0 0.46 10.0 20.6 2.5 1 1 1 2 2 2 0 Inhibitor of apoptosis-promoting Bax1 Isochorismatase PF00857.15 gi|154150557|ref|YP_001404175.1| - 4.9e-41 140.5 0.0 5.6e-41 140.3 0.0 1.0 1 0 0 1 1 1 1 Isochorismatase family MFS_1 PF07690.11 gi|154150558|ref|YP_001404176.1| - 1.1e-44 152.6 69.6 3.4e-42 144.4 45.7 3.9 2 1 0 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|154150558|ref|YP_001404176.1| - 4.8e-11 41.8 17.8 4.8e-11 41.8 12.3 3.5 5 1 0 5 5 5 1 Sugar (and other) transporter MFS_1_like PF12832.2 gi|154150558|ref|YP_001404176.1| - 0.00067 19.4 0.2 0.0046 16.7 0.1 2.5 1 0 0 1 1 1 1 MFS_1 like family MFS_2 PF13347.1 gi|154150558|ref|YP_001404176.1| - 0.0023 16.4 14.0 0.0023 16.4 9.7 3.3 2 1 1 3 3 3 2 MFS/sugar transport protein DUF872 PF05915.7 gi|154150558|ref|YP_001404176.1| - 0.61 9.9 3.9 3.4 7.5 1.2 2.7 2 0 0 2 2 2 0 Eukaryotic protein of unknown function (DUF872) DHH PF01368.15 gi|154150559|ref|YP_001404177.1| - 2.8e-33 114.6 0.0 5.7e-33 113.6 0.0 1.5 1 1 0 1 1 1 1 DHH family DHHA2 PF02833.9 gi|154150559|ref|YP_001404177.1| - 2.6e-23 82.5 0.0 4.4e-23 81.8 0.0 1.4 1 0 0 1 1 1 1 DHHA2 domain DRTGG PF07085.7 gi|154150559|ref|YP_001404177.1| - 1.7e-18 66.1 1.9 4.7e-18 64.7 1.3 1.8 1 0 0 1 1 1 1 DRTGG domain CBS PF00571.23 gi|154150559|ref|YP_001404177.1| - 7.3e-12 44.8 0.2 0.00015 21.5 0.0 2.6 2 0 0 2 2 2 2 CBS domain Hpr_kinase_N PF02603.11 gi|154150559|ref|YP_001404177.1| - 0.1 12.2 0.0 0.25 11.0 0.0 1.6 1 0 0 1 1 1 0 HPr Serine kinase N terminus 1-cysPrx_C PF10417.4 gi|154150560|ref|YP_001404178.1| - 0.038 13.6 0.1 0.064 12.9 0.1 1.3 1 0 0 1 1 1 0 C-terminal domain of 1-Cys peroxiredoxin Choline_transpo PF04515.7 gi|154150560|ref|YP_001404178.1| - 0.65 8.6 10.1 0.015 14.0 2.5 1.5 2 0 0 2 2 2 0 Plasma-membrane choline transporter PadR PF03551.9 gi|154150561|ref|YP_001404179.1| - 1.3e-16 60.1 0.0 2.1e-16 59.4 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_34 PF13601.1 gi|154150561|ref|YP_001404179.1| - 0.0035 17.3 0.0 0.02 14.9 0.0 2.0 1 1 0 1 1 1 1 Winged helix DNA-binding domain Replic_Relax PF13814.1 gi|154150561|ref|YP_001404179.1| - 0.091 12.6 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 Replication-relaxation ABC_tran PF00005.22 gi|154150562|ref|YP_001404180.1| - 4.4e-34 117.7 0.0 9.1e-34 116.6 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|154150562|ref|YP_001404180.1| - 2.7e-15 57.1 0.4 7e-10 39.3 0.0 2.3 1 1 1 2 2 2 2 AAA domain AAA_15 PF13175.1 gi|154150562|ref|YP_001404180.1| - 4.1e-08 32.6 0.3 1.2e-06 27.8 0.1 2.2 2 0 0 2 2 2 1 AAA ATPase domain DUF4162 PF13732.1 gi|154150562|ref|YP_001404180.1| - 2e-05 24.9 0.0 4.2e-05 23.9 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_23 PF13476.1 gi|154150562|ref|YP_001404180.1| - 0.0001 22.7 0.1 0.0002 21.7 0.1 1.8 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|154150562|ref|YP_001404180.1| - 0.0001 21.6 0.1 0.021 14.0 0.0 2.9 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA PF00004.24 gi|154150562|ref|YP_001404180.1| - 0.00037 20.6 0.4 0.006 16.7 0.3 2.6 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.1 gi|154150562|ref|YP_001404180.1| - 0.001 18.4 0.0 0.033 13.5 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.1 gi|154150562|ref|YP_001404180.1| - 0.0015 18.0 0.2 0.0027 17.1 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.1 gi|154150562|ref|YP_001404180.1| - 0.0034 17.3 0.1 0.012 15.5 0.0 1.8 2 1 0 2 2 2 1 AAA ATPase domain SRP54 PF00448.17 gi|154150562|ref|YP_001404180.1| - 0.0039 16.6 0.0 0.0086 15.5 0.0 1.5 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain IstB_IS21 PF01695.12 gi|154150562|ref|YP_001404180.1| - 0.019 14.4 0.1 1.8 7.9 0.0 2.4 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_30 PF13604.1 gi|154150562|ref|YP_001404180.1| - 0.023 14.2 0.0 0.047 13.2 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.1 gi|154150562|ref|YP_001404180.1| - 0.024 14.5 0.1 2.2 8.1 0.0 3.0 2 1 0 2 2 2 0 AAA domain Rad17 PF03215.10 gi|154150562|ref|YP_001404180.1| - 0.052 12.2 0.0 0.066 11.8 0.0 1.1 1 0 0 1 1 1 0 Rad17 cell cycle checkpoint protein Peptidase_S24 PF00717.18 gi|154150562|ref|YP_001404180.1| - 0.096 12.3 0.0 0.28 10.8 0.0 1.8 1 0 0 1 1 1 0 Peptidase S24-like AAA_22 PF13401.1 gi|154150562|ref|YP_001404180.1| - 0.13 12.4 2.4 0.47 10.6 0.5 2.5 2 1 0 2 2 2 0 AAA domain UPF0079 PF02367.12 gi|154150562|ref|YP_001404180.1| - 0.14 11.7 0.3 0.35 10.5 0.1 1.8 2 0 0 2 2 1 0 Uncharacterised P-loop hydrolase UPF0079 ABC2_membrane PF01061.19 gi|154150563|ref|YP_001404181.1| - 2.8e-39 134.4 25.6 4.5e-39 133.8 17.7 1.2 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.2 gi|154150563|ref|YP_001404181.1| - 5.8e-16 58.4 27.7 5.8e-16 58.4 19.2 1.7 1 1 1 2 2 2 1 ABC-2 family transporter protein DUF204 PF02659.10 gi|154150563|ref|YP_001404181.1| - 0.015 15.3 0.6 0.015 15.3 0.4 4.1 3 2 3 6 6 6 0 Domain of unknown function DUF SPW PF03779.9 gi|154150563|ref|YP_001404181.1| - 9.2 5.7 12.6 0.18 11.2 0.9 3.2 3 0 0 3 3 3 0 SPW repeat YbjQ_1 PF01906.12 gi|154150564|ref|YP_001404182.1| - 1.1e-36 125.3 0.1 1.3e-36 125.2 0.1 1.0 1 0 0 1 1 1 1 Putative heavy-metal-binding DUF4156 PF13698.1 gi|154150564|ref|YP_001404182.1| - 0.0017 18.2 0.0 0.0022 17.8 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4156) HATPase_c_2 PF13581.1 gi|154150565|ref|YP_001404183.1| - 3.6e-20 71.9 0.0 4.5e-20 71.7 0.0 1.1 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c PF02518.21 gi|154150565|ref|YP_001404183.1| - 6.7e-06 25.7 0.0 7.7e-06 25.5 0.0 1.2 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.19 gi|154150566|ref|YP_001404184.1| - 8.1e-18 64.4 0.0 9.3e-18 64.2 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain MacB_PCD PF12704.2 gi|154150567|ref|YP_001404185.1| - 5.8e-29 101.3 16.4 1.7e-28 99.7 3.5 2.4 2 0 0 2 2 2 2 MacB-like periplasmic core domain FtsX PF02687.16 gi|154150567|ref|YP_001404185.1| - 8.4e-23 80.4 20.7 1.7e-21 76.2 10.3 2.6 2 0 0 2 2 2 2 FtsX-like permease family Nup153 PF08604.5 gi|154150567|ref|YP_001404185.1| - 0.14 10.8 0.0 0.21 10.2 0.0 1.2 1 0 0 1 1 1 0 Nucleoporin Nup153-like G0-G1_switch_2 PF15103.1 gi|154150567|ref|YP_001404185.1| - 0.35 11.1 0.0 0.35 11.1 0.0 2.4 3 0 0 3 3 3 0 G0/G1 switch protein 2 ABC_tran PF00005.22 gi|154150568|ref|YP_001404186.1| - 8.9e-33 113.4 0.0 1.2e-32 113.1 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|154150568|ref|YP_001404186.1| - 5.8e-15 56.0 0.1 4.8e-13 49.7 0.1 2.1 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|154150568|ref|YP_001404186.1| - 3.9e-07 29.5 0.3 0.0014 17.9 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_15 PF13175.1 gi|154150568|ref|YP_001404186.1| - 4.7e-05 22.6 0.0 0.036 13.1 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.1 gi|154150568|ref|YP_001404186.1| - 0.00037 19.9 0.1 0.00066 19.1 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_10 PF12846.2 gi|154150568|ref|YP_001404186.1| - 0.0016 17.9 0.3 0.063 12.7 0.7 2.1 1 1 1 2 2 2 1 AAA-like domain DUF258 PF03193.11 gi|154150568|ref|YP_001404186.1| - 0.0017 17.5 0.0 0.0028 16.8 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_16 PF13191.1 gi|154150568|ref|YP_001404186.1| - 0.0047 16.9 0.0 0.0066 16.4 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.1 gi|154150568|ref|YP_001404186.1| - 0.0049 16.2 0.1 0.061 12.7 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.1 gi|154150568|ref|YP_001404186.1| - 0.012 15.7 0.5 0.061 13.4 0.1 2.0 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.1 gi|154150568|ref|YP_001404186.1| - 0.029 14.6 1.0 0.052 13.8 0.1 1.6 1 1 0 2 2 2 0 AAA domain G-alpha PF00503.15 gi|154150568|ref|YP_001404186.1| - 0.041 12.5 0.0 0.045 12.4 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit SbcCD_C PF13558.1 gi|154150568|ref|YP_001404186.1| - 0.042 13.7 0.1 0.27 11.1 0.1 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit IstB_IS21 PF01695.12 gi|154150568|ref|YP_001404186.1| - 0.049 13.0 0.1 0.54 9.6 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_17 PF13207.1 gi|154150568|ref|YP_001404186.1| - 0.053 14.3 0.6 0.13 13.1 0.2 1.8 2 1 0 2 2 2 0 AAA domain Arch_ATPase PF01637.13 gi|154150568|ref|YP_001404186.1| - 0.055 13.1 0.0 0.13 11.9 0.0 1.9 1 1 0 1 1 1 0 Archaeal ATPase AAA_33 PF13671.1 gi|154150568|ref|YP_001404186.1| - 0.067 13.0 0.0 0.18 11.6 0.0 1.7 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.10 gi|154150568|ref|YP_001404186.1| - 0.092 12.4 0.1 9.8 5.8 0.0 2.2 2 0 0 2 2 2 0 NTPase AAA_18 PF13238.1 gi|154150568|ref|YP_001404186.1| - 0.12 12.6 0.9 0.35 11.1 0.6 2.1 1 1 0 1 1 1 0 AAA domain CARDB PF07705.6 gi|154150569|ref|YP_001404187.1| - 1.8e-07 31.1 8.9 2.5e-05 24.2 0.2 2.9 3 0 0 3 3 3 2 CARDB Transglut_C PF00927.17 gi|154150569|ref|YP_001404187.1| - 0.0014 18.6 0.1 0.006 16.6 0.0 2.1 3 0 0 3 3 3 1 Transglutaminase family, C-terminal ig like domain DUF4366 PF14283.1 gi|154150569|ref|YP_001404187.1| - 0.014 14.8 0.0 0.026 13.9 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4366) NPCBM_assoc PF10633.4 gi|154150569|ref|YP_001404187.1| - 0.067 13.2 1.1 0.22 11.6 0.1 2.5 2 0 0 2 2 2 0 NPCBM-associated, NEW3 domain of alpha-galactosidase TrmB PF01978.14 gi|154150570|ref|YP_001404188.1| - 1.9e-15 56.3 0.5 3.4e-15 55.5 0.2 1.6 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_36 PF13730.1 gi|154150570|ref|YP_001404188.1| - 0.0002 21.4 0.1 0.98 9.6 0.1 3.1 3 0 0 3 3 3 2 Helix-turn-helix domain MarR_2 PF12802.2 gi|154150570|ref|YP_001404188.1| - 0.0037 16.9 0.0 0.0075 15.9 0.0 1.5 1 0 0 1 1 1 1 MarR family PadR PF03551.9 gi|154150570|ref|YP_001404188.1| - 0.086 12.6 0.0 0.57 9.9 0.0 2.2 1 1 1 2 2 2 0 Transcriptional regulator PadR-like family Regulator_TrmB PF11495.3 gi|154150570|ref|YP_001404188.1| - 0.14 11.1 0.0 0.22 10.4 0.0 1.3 1 0 0 1 1 1 0 Archaeal transcriptional regulator TrmB Fe_dep_repress PF01325.14 gi|154150570|ref|YP_001404188.1| - 0.23 11.3 0.1 0.23 11.3 0.0 2.1 3 0 0 3 3 3 0 Iron dependent repressor, N-terminal DNA binding domain HATPase_c PF02518.21 gi|154150571|ref|YP_001404189.1| - 2.1e-13 49.9 0.0 4.4e-13 48.9 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ResIII PF04851.10 gi|154150573|ref|YP_001404191.1| - 5.6e-30 104.5 0.1 5.1e-29 101.4 0.0 2.5 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit EcoEI_R_C PF08463.5 gi|154150573|ref|YP_001404191.1| - 1.4e-29 103.0 0.2 3.5e-29 101.7 0.1 1.7 1 0 0 1 1 1 1 EcoEI R protein C-terminal HSDR_N PF04313.9 gi|154150573|ref|YP_001404191.1| - 4.5e-08 33.0 0.0 3.8e-06 26.7 0.0 2.5 1 1 0 1 1 1 1 Type I restriction enzyme R protein N terminus (HSDR_N) DEAD PF00270.24 gi|154150573|ref|YP_001404191.1| - 9.2e-08 31.7 0.0 4.7e-06 26.2 0.0 2.5 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|154150573|ref|YP_001404191.1| - 4.2e-07 29.7 0.1 2.1e-05 24.2 0.1 2.8 2 0 0 2 2 2 1 Helicase conserved C-terminal domain UvrD-helicase PF00580.16 gi|154150573|ref|YP_001404191.1| - 0.0013 18.1 0.4 0.0025 17.1 0.0 1.6 2 0 0 2 2 2 1 UvrD/REP helicase N-terminal domain Kinesin PF00225.18 gi|154150573|ref|YP_001404191.1| - 0.022 13.4 0.0 0.042 12.5 0.0 1.4 1 0 0 1 1 1 0 Kinesin motor domain AAA_19 PF13245.1 gi|154150573|ref|YP_001404191.1| - 0.026 14.2 0.0 0.15 11.8 0.0 2.3 2 0 0 2 2 2 0 Part of AAA domain KdpD PF02702.12 gi|154150573|ref|YP_001404191.1| - 0.026 13.6 0.1 0.081 12.0 0.0 1.8 2 0 0 2 2 2 0 Osmosensitive K+ channel His kinase sensor domain DUF853 PF05872.7 gi|154150573|ref|YP_001404191.1| - 0.039 12.3 0.0 0.057 11.7 0.0 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) PhoH PF02562.11 gi|154150573|ref|YP_001404191.1| - 0.043 13.0 0.1 0.078 12.2 0.1 1.4 1 0 0 1 1 1 0 PhoH-like protein T2SE PF00437.15 gi|154150573|ref|YP_001404191.1| - 0.07 12.0 0.0 0.13 11.1 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein N6_Mtase PF02384.11 gi|154150574|ref|YP_001404192.1| - 3.6e-60 203.6 0.0 4.7e-60 203.2 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase Methyltransf_26 PF13659.1 gi|154150574|ref|YP_001404192.1| - 2.2e-14 53.4 0.0 3.9e-14 52.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain HsdM_N PF12161.3 gi|154150574|ref|YP_001404192.1| - 9.9e-13 48.6 0.0 2.3e-10 41.0 0.0 2.8 2 1 0 2 2 2 1 HsdM N-terminal domain UPF0020 PF01170.13 gi|154150574|ref|YP_001404192.1| - 2e-06 27.5 0.0 3.4e-06 26.7 0.0 1.4 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 MTS PF05175.9 gi|154150574|ref|YP_001404192.1| - 0.0002 20.7 0.1 0.00053 19.3 0.1 1.7 1 1 0 1 1 1 1 Methyltransferase small domain Eco57I PF07669.6 gi|154150574|ref|YP_001404192.1| - 0.0074 16.6 0.0 0.016 15.5 0.0 1.5 1 0 0 1 1 1 1 Eco57I restriction-modification methylase Methyltransf_23 PF13489.1 gi|154150574|ref|YP_001404192.1| - 0.13 11.9 0.0 0.65 9.7 0.0 2.2 1 1 0 1 1 1 0 Methyltransferase domain Methylase_S PF01420.14 gi|154150575|ref|YP_001404193.1| - 1.2e-33 116.4 0.0 7.9e-21 74.7 0.0 2.2 2 0 0 2 2 2 2 Type I restriction modification DNA specificity domain DUF3568 PF12092.3 gi|154150577|ref|YP_001404195.1| - 0.0066 16.1 0.0 0.0078 15.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3568) zf-DNL PF05180.7 gi|154150577|ref|YP_001404195.1| - 0.057 13.1 0.0 0.12 12.1 0.0 1.6 1 0 0 1 1 1 0 DNL zinc finger rpo132 PF12415.3 gi|154150578|ref|YP_001404196.1| - 0.00085 18.2 0.1 0.0018 17.1 0.1 1.5 1 0 0 1 1 1 1 Poxvirus DNA dependent RNA polymerase TraF_2 PF13729.1 gi|154150578|ref|YP_001404196.1| - 0.019 13.7 0.0 0.034 12.9 0.0 1.4 1 0 0 1 1 1 0 F plasmid transfer operon, TraF, protein Myosin_N PF02736.14 gi|154150578|ref|YP_001404196.1| - 0.025 14.2 0.1 0.18 11.4 0.1 2.4 2 0 0 2 2 2 0 Myosin N-terminal SH3-like domain Cyclase_polyket PF04673.7 gi|154150578|ref|YP_001404196.1| - 0.041 13.9 0.2 0.31 11.1 0.0 2.4 2 0 0 2 2 2 0 Polyketide synthesis cyclase tRNA_anti-like PF12869.2 gi|154150578|ref|YP_001404196.1| - 0.067 12.6 0.1 0.13 11.6 0.0 1.5 1 0 0 1 1 1 0 tRNA_anti-like Amidohydro_2 PF04909.9 gi|154150579|ref|YP_001404197.1| - 6e-53 180.1 2.3 7.5e-53 179.8 1.6 1.1 1 0 0 1 1 1 1 Amidohydrolase TatD_DNase PF01026.16 gi|154150579|ref|YP_001404197.1| - 0.014 14.6 0.0 0.055 12.6 0.0 1.8 1 1 0 1 1 1 0 TatD related DNase DUF362 PF04015.7 gi|154150580|ref|YP_001404198.1| - 8.6e-40 136.4 0.0 1.1e-39 136.0 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF362) G-patch_2 PF12656.2 gi|154150580|ref|YP_001404198.1| - 0.085 12.7 0.0 0.2 11.4 0.0 1.6 1 0 0 1 1 1 0 DExH-box splicing factor binding site DUF91 PF01939.11 gi|154150581|ref|YP_001404199.1| - 0.058 12.5 0.1 0.19 10.8 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function DUF91 DUF1814 PF08843.6 gi|154150582|ref|YP_001404200.1| - 4.3e-06 26.6 0.0 5.8e-06 26.2 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase of unknown function (DUF1814) URO-D PF01208.12 gi|154150583|ref|YP_001404201.1| - 1.8e-17 63.3 0.0 3.5e-13 49.2 0.0 2.5 2 1 0 2 2 2 2 Uroporphyrinogen decarboxylase (URO-D) B12-binding PF02310.14 gi|154150584|ref|YP_001404202.1| - 5.3e-22 77.9 0.5 7.7e-22 77.4 0.3 1.2 1 0 0 1 1 1 1 B12 binding domain B12-binding_2 PF02607.12 gi|154150584|ref|YP_001404202.1| - 6.2e-14 51.7 0.2 1.2e-13 50.8 0.1 1.5 1 0 0 1 1 1 1 B12 binding domain DASH_Dad2 PF08654.5 gi|154150584|ref|YP_001404202.1| - 0.016 15.1 0.0 0.078 12.9 0.0 1.9 2 0 0 2 2 2 0 DASH complex subunit Dad2 ALAD PF00490.16 gi|154150584|ref|YP_001404202.1| - 0.042 12.7 0.0 0.066 12.0 0.0 1.2 1 0 0 1 1 1 0 Delta-aminolevulinic acid dehydratase DUF4445 PF14574.1 gi|154150585|ref|YP_001404203.1| - 1.3e-143 478.2 0.0 1.6e-143 477.8 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4445) Fer2 PF00111.22 gi|154150585|ref|YP_001404203.1| - 2.4e-10 40.0 0.1 5.3e-10 38.9 0.1 1.6 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain MtrH PF02007.13 gi|154150586|ref|YP_001404204.1| - 4.5e-97 324.6 0.2 5.7e-97 324.2 0.1 1.1 1 0 0 1 1 1 1 Tetrahydromethanopterin S-methyltransferase MtrH subunit Plasmid_stabil PF05016.9 gi|154150588|ref|YP_001404206.1| - 0.00024 21.4 2.6 0.00031 21.0 1.8 1.1 1 0 0 1 1 1 1 Plasmid stabilisation system protein Orn_Arg_deC_N PF02784.11 gi|154150589|ref|YP_001404207.1| - 5.8e-53 179.6 0.0 7.5e-53 179.2 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.17 gi|154150589|ref|YP_001404207.1| - 6.5e-20 70.9 0.1 1.1e-19 70.2 0.1 1.3 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Ala_racemase_N PF01168.15 gi|154150589|ref|YP_001404207.1| - 6.3e-07 29.1 0.0 8.6e-07 28.7 0.0 1.2 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain Saccharop_dh PF03435.13 gi|154150590|ref|YP_001404208.1| - 3.8e-100 335.5 0.0 4.3e-100 335.4 0.0 1.0 1 0 0 1 1 1 1 Saccharopine dehydrogenase DUF2029 PF09594.5 gi|154150591|ref|YP_001404209.1| - 5.7e-25 88.2 22.7 5.7e-25 88.2 15.8 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF2029) EpsG PF14897.1 gi|154150591|ref|YP_001404209.1| - 6.9e-09 35.0 37.7 1.1e-08 34.3 26.1 1.3 1 0 0 1 1 1 1 EpsG family DUF4094 PF13334.1 gi|154150591|ref|YP_001404209.1| - 0.11 12.9 0.4 0.41 11.0 0.2 2.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) DUF2100 PF09873.4 gi|154150592|ref|YP_001404210.1| - 0.002 17.6 0.1 0.0022 17.5 0.1 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2100) Aminotran_5 PF00266.14 gi|154150593|ref|YP_001404211.1| - 9.6e-18 64.0 0.0 1.3e-17 63.6 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V SLA_LP_auto_ag PF05889.8 gi|154150593|ref|YP_001404211.1| - 1e-17 63.7 0.0 1.7e-17 63.0 0.0 1.3 1 0 0 1 1 1 1 Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen) DegT_DnrJ_EryC1 PF01041.12 gi|154150593|ref|YP_001404211.1| - 0.0012 17.9 0.4 0.0019 17.3 0.3 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.16 gi|154150593|ref|YP_001404211.1| - 0.012 14.8 0.0 0.017 14.2 0.0 1.4 1 0 0 1 1 1 0 Beta-eliminating lyase PPK2 PF03976.9 gi|154150594|ref|YP_001404212.1| - 7.5e-136 450.6 6.9 1.3e-82 276.5 1.2 2.0 2 0 0 2 2 2 2 Polyphosphate kinase 2 (PPK2) AAA_18 PF13238.1 gi|154150594|ref|YP_001404212.1| - 3.1e-05 24.2 0.6 0.15 12.3 0.1 2.6 2 0 0 2 2 2 2 AAA domain Amidohydro_4 PF13147.1 gi|154150594|ref|YP_001404212.1| - 0.033 14.2 0.0 0.096 12.7 0.0 1.7 2 0 0 2 2 2 0 Amidohydrolase PPK2 PF03976.9 gi|154150595|ref|YP_001404213.1| - 1.4e-143 475.9 4.0 1.1e-83 279.9 1.3 2.0 2 0 0 2 2 2 2 Polyphosphate kinase 2 (PPK2) AAA_18 PF13238.1 gi|154150595|ref|YP_001404213.1| - 0.00044 20.5 0.5 0.092 13.0 0.0 3.0 2 1 0 2 2 2 1 AAA domain AAA_33 PF13671.1 gi|154150595|ref|YP_001404213.1| - 0.02 14.7 0.1 0.14 12.0 0.0 2.5 2 1 0 2 2 2 0 AAA domain Thymidylate_kin PF02223.12 gi|154150595|ref|YP_001404213.1| - 0.068 12.5 0.1 22 4.3 0.0 3.3 3 1 0 3 3 3 0 Thymidylate kinase SKI PF01202.17 gi|154150595|ref|YP_001404213.1| - 0.099 12.5 0.1 0.33 10.8 0.0 1.9 2 0 0 2 2 2 0 Shikimate kinase PMC2NT PF08066.7 gi|154150595|ref|YP_001404213.1| - 0.1 12.9 1.2 0.23 11.7 0.2 2.1 2 0 0 2 2 2 0 PMC2NT (NUC016) domain DUF2150 PF09920.4 gi|154150596|ref|YP_001404214.1| - 3.3e-68 229.0 0.7 3.8e-68 228.8 0.5 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2150) PqqD PF05402.7 gi|154150597|ref|YP_001404215.1| - 0.076 13.0 0.0 0.17 11.8 0.0 1.6 1 0 0 1 1 1 0 Coenzyme PQQ synthesis protein D (PqqD) Ribosomal_S13_N PF08069.7 gi|154150597|ref|YP_001404215.1| - 0.15 11.8 0.0 0.23 11.3 0.0 1.3 1 0 0 1 1 1 0 Ribosomal S13/S15 N-terminal domain DJ-1_PfpI PF01965.19 gi|154150598|ref|YP_001404216.1| - 2.9e-29 101.4 0.7 3.7e-29 101.0 0.5 1.2 1 0 0 1 1 1 1 DJ-1/PfpI family DUF4066 PF13278.1 gi|154150598|ref|YP_001404216.1| - 1.8e-13 50.0 0.1 2.1e-13 49.8 0.1 1.1 1 0 0 1 1 1 1 Putative amidotransferase DUF192 PF02643.10 gi|154150598|ref|YP_001404216.1| - 0.13 11.9 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized ACR, COG1430 TM_helix PF05552.7 gi|154150599|ref|YP_001404217.1| - 5.6e-19 67.5 4.0 2.9e-11 42.8 0.3 3.3 3 0 0 3 3 3 2 Conserved TM helix FtsX PF02687.16 gi|154150599|ref|YP_001404217.1| - 0.75 9.5 28.1 1 9.1 5.5 3.2 2 1 1 3 3 3 0 FtsX-like permease family Colicin_V PF02674.11 gi|154150599|ref|YP_001404217.1| - 1.7 8.4 27.0 7.4 6.4 10.1 2.9 1 1 1 2 2 2 0 Colicin V production protein PIG-P PF08510.7 gi|154150599|ref|YP_001404217.1| - 3.2 7.4 14.3 0.6 9.7 6.8 2.0 1 1 1 2 2 2 0 PIG-P PAS_9 PF13426.1 gi|154150600|ref|YP_001404218.1| - 1.6e-30 105.5 1.0 7.7e-11 42.2 0.0 3.7 4 0 0 4 4 4 3 PAS domain PAS PF00989.19 gi|154150600|ref|YP_001404218.1| - 3.8e-28 97.5 0.4 2e-08 33.9 0.0 3.4 3 0 0 3 3 3 3 PAS fold PAS_8 PF13188.1 gi|154150600|ref|YP_001404218.1| - 5.1e-21 73.7 0.0 2.7e-07 30.1 0.0 4.1 4 0 0 4 4 4 3 PAS domain PAS_4 PF08448.5 gi|154150600|ref|YP_001404218.1| - 2e-20 72.8 0.0 1.1e-08 35.0 0.0 3.5 3 1 0 3 3 3 3 PAS fold PAS_3 PF08447.6 gi|154150600|ref|YP_001404218.1| - 2.3e-18 66.0 0.0 5.9e-08 32.7 0.0 2.6 2 0 0 2 2 2 2 PAS fold PAS_7 PF12860.2 gi|154150600|ref|YP_001404218.1| - 0.00041 20.3 6.1 4.9 7.1 0.0 5.1 4 2 0 4 4 4 2 PAS fold TBPIP PF07106.8 gi|154150600|ref|YP_001404218.1| - 0.0015 18.1 0.1 0.0015 18.1 0.1 2.6 4 0 0 4 4 4 1 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) HTH_5 PF01022.15 gi|154150600|ref|YP_001404218.1| - 0.0025 17.4 0.0 0.0055 16.3 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_38 PF13936.1 gi|154150600|ref|YP_001404218.1| - 0.0051 16.3 0.0 0.02 14.4 0.0 2.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.1 gi|154150600|ref|YP_001404218.1| - 0.0053 16.1 0.7 0.14 11.5 0.0 3.2 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.5 gi|154150600|ref|YP_001404218.1| - 0.0087 15.6 0.0 0.02 14.4 0.0 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain PAS_11 PF14598.1 gi|154150600|ref|YP_001404218.1| - 0.041 13.8 0.0 0.62 10.0 0.0 2.4 2 0 0 2 2 2 0 PAS domain HTH_23 PF13384.1 gi|154150600|ref|YP_001404218.1| - 0.055 13.1 0.0 0.21 11.2 0.0 2.0 2 0 0 2 2 2 0 Homeodomain-like domain CARDB PF07705.6 gi|154150601|ref|YP_001404219.1| - 6.6e-07 29.3 9.2 0.0055 16.7 0.4 3.8 3 1 0 3 3 3 3 CARDB NPCBM_assoc PF10633.4 gi|154150601|ref|YP_001404219.1| - 2.6e-06 27.4 5.7 0.045 13.7 0.1 4.1 3 1 0 3 3 3 2 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF11 PF01345.13 gi|154150601|ref|YP_001404219.1| - 0.00037 20.4 12.2 0.027 14.5 1.4 3.4 3 0 0 3 3 3 2 Domain of unknown function DUF11 MMPL PF03176.10 gi|154150602|ref|YP_001404220.1| - 6.8e-54 182.8 21.7 1.4e-32 112.7 3.5 2.7 3 0 0 3 3 3 2 MMPL family Sterol-sensing PF12349.3 gi|154150602|ref|YP_001404220.1| - 1.1e-13 50.8 16.6 3.8e-08 32.9 4.7 2.7 2 0 0 2 2 2 2 Sterol-sensing domain of SREBP cleavage-activation SecD_SecF PF02355.11 gi|154150602|ref|YP_001404220.1| - 2.6e-08 33.2 32.4 1e-07 31.3 6.3 3.4 4 0 0 4 4 4 2 Protein export membrane protein Patched PF02460.13 gi|154150602|ref|YP_001404220.1| - 6.1e-06 24.4 22.2 0.0034 15.4 6.7 2.3 2 0 0 2 2 2 2 Patched family CARDB PF07705.6 gi|154150603|ref|YP_001404221.1| - 1.6e-06 28.0 11.4 0.093 12.7 0.2 4.0 3 1 0 3 3 3 3 CARDB NPCBM_assoc PF10633.4 gi|154150603|ref|YP_001404221.1| - 0.00056 19.8 19.9 0.14 12.2 1.2 5.6 6 1 0 6 6 6 3 NPCBM-associated, NEW3 domain of alpha-galactosidase TRAP_alpha PF03896.11 gi|154150603|ref|YP_001404221.1| - 0.0098 14.9 0.1 0.14 11.1 0.0 2.3 2 0 0 2 2 2 1 Translocon-associated protein (TRAP), alpha subunit NPCBM_assoc PF10633.4 gi|154150604|ref|YP_001404222.1| - 5.2e-11 42.4 6.0 0.00056 19.9 0.0 3.8 4 0 0 4 4 4 3 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.6 gi|154150604|ref|YP_001404222.1| - 9e-10 38.5 14.3 0.00044 20.2 1.2 4.0 3 2 1 4 4 4 3 CARDB DUF3869 PF12985.2 gi|154150604|ref|YP_001404222.1| - 1.4 9.4 17.1 1.2 9.6 1.7 3.7 2 1 2 4 4 4 0 Domain of unknown function (DUF3869) zinc_ribbon_2 PF13240.1 gi|154150606|ref|YP_001404224.1| - 4.2e-12 45.1 16.8 2e-06 27.0 4.2 2.4 2 0 0 2 2 2 2 zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|154150606|ref|YP_001404224.1| - 7e-12 44.1 15.1 4e-07 29.0 3.8 2.3 2 0 0 2 2 2 2 zinc-ribbon domain DZR PF12773.2 gi|154150606|ref|YP_001404224.1| - 6e-09 35.5 7.0 3.7e-05 23.4 0.5 2.4 2 0 0 2 2 2 2 Double zinc ribbon UPF0547 PF10571.4 gi|154150606|ref|YP_001404224.1| - 0.0016 18.1 12.6 0.097 12.3 1.4 2.5 2 0 0 2 2 2 2 Uncharacterised protein family UPF0547 Prok-RING_1 PF14446.1 gi|154150606|ref|YP_001404224.1| - 0.047 13.4 6.7 2.2 8.0 0.2 2.2 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 bPH_1 PF08000.6 gi|154150606|ref|YP_001404224.1| - 0.1 12.2 0.1 0.17 11.5 0.0 1.3 1 0 0 1 1 1 0 Bacterial PH domain DUF2321 PF10083.4 gi|154150606|ref|YP_001404224.1| - 0.43 10.0 6.1 0.17 11.4 0.4 2.5 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2321) zf-C3HC4_3 PF13920.1 gi|154150606|ref|YP_001404224.1| - 0.56 9.9 6.3 0.84 9.3 0.3 2.3 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DUF1272 PF06906.6 gi|154150606|ref|YP_001404224.1| - 1.1 9.1 10.3 1.2 9.0 1.0 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF1272) GFA PF04828.9 gi|154150606|ref|YP_001404224.1| - 3.9 7.4 8.3 8.1 6.4 0.0 3.6 2 2 1 3 3 3 0 Glutathione-dependent formaldehyde-activating enzyme DUF2116 PF09889.4 gi|154150606|ref|YP_001404224.1| - 8.7 6.2 6.6 9 6.1 0.2 2.3 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) AdoMet_Synthase PF01941.14 gi|154150607|ref|YP_001404225.1| - 2.6e-179 595.8 2.3 3e-179 595.6 1.6 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase (AdoMet synthetase) HisG PF01634.13 gi|154150608|ref|YP_001404226.1| - 1.9e-50 170.6 0.3 2.8e-50 170.1 0.2 1.2 1 0 0 1 1 1 1 ATP phosphoribosyltransferase HisG_C PF08029.6 gi|154150608|ref|YP_001404226.1| - 4.8e-26 90.4 0.3 9.7e-26 89.5 0.2 1.5 1 0 0 1 1 1 1 HisG, C-terminal domain NMT1 PF09084.6 gi|154150608|ref|YP_001404226.1| - 1.5e-05 24.6 0.1 0.00025 20.6 0.1 2.5 1 1 0 1 1 1 1 NMT1/THI5 like SBP_bac_3 PF00497.15 gi|154150608|ref|YP_001404226.1| - 0.00067 18.9 0.0 0.0009 18.5 0.0 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Phosphonate-bd PF12974.2 gi|154150608|ref|YP_001404226.1| - 0.016 14.6 0.1 0.064 12.6 0.0 1.9 1 1 1 2 2 2 0 ABC transporter, phosphonate, periplasmic substrate-binding protein DUF881 PF05949.7 gi|154150608|ref|YP_001404226.1| - 0.069 12.6 0.1 0.15 11.4 0.0 1.6 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF881) IL22 PF14565.1 gi|154150608|ref|YP_001404226.1| - 0.09 12.8 0.0 0.18 11.8 0.0 1.5 1 0 0 1 1 1 0 Interleukin 22 IL-10-related T-cell-derived-inducible factor His_biosynth PF00977.16 gi|154150609|ref|YP_001404227.1| - 6.3e-67 225.1 0.5 7e-67 225.0 0.4 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein ThiG PF05690.9 gi|154150609|ref|YP_001404227.1| - 3.7e-07 29.4 0.7 0.016 14.2 0.0 2.0 1 1 1 2 2 2 2 Thiazole biosynthesis protein ThiG DeoC PF01791.4 gi|154150609|ref|YP_001404227.1| - 7.2e-05 22.1 2.2 0.2 10.9 0.4 2.4 2 1 1 3 3 3 2 DeoC/LacD family aldolase DHO_dh PF01180.16 gi|154150609|ref|YP_001404227.1| - 8.3e-05 21.6 0.6 0.057 12.3 0.0 2.1 2 0 0 2 2 2 2 Dihydroorotate dehydrogenase PcrB PF01884.12 gi|154150609|ref|YP_001404227.1| - 0.00031 20.0 0.7 0.0037 16.5 0.0 2.2 2 1 0 2 2 2 1 PcrB family Dus PF01207.12 gi|154150609|ref|YP_001404227.1| - 0.012 14.4 0.0 0.89 8.3 0.0 2.2 1 1 0 2 2 2 0 Dihydrouridine synthase (Dus) NMO PF03060.10 gi|154150609|ref|YP_001404227.1| - 0.027 13.6 2.1 0.052 12.6 0.6 1.8 2 0 0 2 2 2 0 Nitronate monooxygenase Pyr_redox_3 PF13738.1 gi|154150609|ref|YP_001404227.1| - 0.083 12.9 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase FMN_dh PF01070.13 gi|154150609|ref|YP_001404227.1| - 0.21 10.3 8.6 0.27 10.0 0.6 2.1 2 0 0 2 2 2 0 FMN-dependent dehydrogenase IGPD PF00475.13 gi|154150610|ref|YP_001404228.1| - 7.1e-58 194.5 0.2 8.8e-58 194.2 0.1 1.1 1 0 0 1 1 1 1 Imidazoleglycerol-phosphate dehydratase DUF3806 PF12713.2 gi|154150610|ref|YP_001404228.1| - 0.11 11.9 0.1 1.1 8.7 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3806) PKD PF00801.15 gi|154150612|ref|YP_001404230.1| - 7.6e-92 301.1 156.5 1.2e-10 40.9 5.4 11.7 12 0 0 12 12 12 10 PKD domain Y_Y_Y PF07495.8 gi|154150612|ref|YP_001404230.1| - 0.28 10.9 44.5 0.021 14.5 1.1 8.7 9 0 0 9 9 9 0 Y_Y_Y domain TM2 PF05154.11 gi|154150613|ref|YP_001404231.1| - 1.1e-08 35.1 1.0 1.1e-08 35.1 0.7 2.0 2 0 0 2 2 2 1 TM2 domain zf-ribbon_3 PF13248.1 gi|154150613|ref|YP_001404231.1| - 3.7e-06 25.9 1.8 3.7e-06 25.9 1.2 1.9 2 0 0 2 2 2 1 zinc-ribbon domain DZR PF12773.2 gi|154150613|ref|YP_001404231.1| - 0.00065 19.4 0.4 0.0012 18.6 0.3 1.5 1 0 0 1 1 1 1 Double zinc ribbon zf-NADH-PPase PF09297.6 gi|154150613|ref|YP_001404231.1| - 0.0023 17.3 6.2 0.066 12.7 0.8 2.4 2 0 0 2 2 2 2 NADH pyrophosphatase zinc ribbon domain Nudix_N_2 PF14803.1 gi|154150613|ref|YP_001404231.1| - 0.0047 16.5 4.2 0.34 10.6 0.1 2.5 2 0 0 2 2 2 2 Nudix N-terminal DUF2189 PF09955.4 gi|154150613|ref|YP_001404231.1| - 0.01 15.7 4.1 0.015 15.2 2.8 1.2 1 0 0 1 1 1 0 Predicted integral membrane protein (DUF2189) DUF898 PF05987.8 gi|154150613|ref|YP_001404231.1| - 0.072 11.9 4.5 0.087 11.6 3.1 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF898) zf-ISL3 PF14690.1 gi|154150613|ref|YP_001404231.1| - 0.098 12.6 2.7 1.2 9.2 0.2 2.4 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DUF4014 PF13198.1 gi|154150613|ref|YP_001404231.1| - 0.12 12.7 0.8 0.12 12.7 0.6 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF4014) NOB1_Zn_bind PF08772.6 gi|154150613|ref|YP_001404231.1| - 0.16 11.8 1.2 0.35 10.7 0.8 1.5 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like Chordopox_A13L PF05961.6 gi|154150613|ref|YP_001404231.1| - 0.23 11.4 2.6 15 5.6 0.5 2.4 2 0 0 2 2 2 0 Chordopoxvirus A13L protein zinc_ribbon_2 PF13240.1 gi|154150613|ref|YP_001404231.1| - 0.38 10.3 10.5 0.27 10.7 5.3 2.3 2 1 0 2 2 2 0 zinc-ribbon domain SUR7 PF06687.7 gi|154150613|ref|YP_001404231.1| - 0.44 10.0 3.7 0.61 9.6 2.6 1.2 1 0 0 1 1 1 0 SUR7/PalI family UPF0547 PF10571.4 gi|154150613|ref|YP_001404231.1| - 0.83 9.3 4.3 3.2 7.5 0.4 2.5 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 DUF3671 PF12420.3 gi|154150613|ref|YP_001404231.1| - 2.1 8.3 4.0 3.2 7.7 2.8 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF4234 PF14018.1 gi|154150613|ref|YP_001404231.1| - 2.8 7.7 4.6 8.5 6.1 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4234) BTP PF05232.7 gi|154150613|ref|YP_001404231.1| - 3.8 7.3 8.1 0.64 9.7 1.0 2.3 2 0 0 2 2 2 0 Bacterial Transmembrane Pair family CBFD_NFYB_HMF PF00808.18 gi|154150614|ref|YP_001404232.1| - 1e-15 57.5 1.1 1.1e-15 57.3 0.7 1.0 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.19 gi|154150614|ref|YP_001404232.1| - 3.8e-13 49.3 0.1 4.2e-13 49.2 0.1 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 Bromo_TP PF07524.8 gi|154150614|ref|YP_001404232.1| - 2.3e-07 30.4 0.0 2.5e-07 30.3 0.0 1.0 1 0 0 1 1 1 1 Bromodomain associated CENP-S PF15630.1 gi|154150614|ref|YP_001404232.1| - 6.9e-06 26.1 0.0 7.1e-06 26.1 0.0 1.2 1 0 0 1 1 1 1 Kinetochore component CENP-S TAF PF02969.12 gi|154150614|ref|YP_001404232.1| - 1.1e-05 25.2 0.9 1.2e-05 25.1 0.6 1.0 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) CENP-T PF15511.1 gi|154150614|ref|YP_001404232.1| - 2.1e-05 23.9 0.2 2.3e-05 23.8 0.1 1.0 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T TFIID-31kDa PF02291.10 gi|154150614|ref|YP_001404232.1| - 0.00083 19.1 0.0 0.00086 19.0 0.0 1.1 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit TFIID_20kDa PF03847.8 gi|154150614|ref|YP_001404232.1| - 0.0051 17.0 0.1 0.0056 16.9 0.1 1.1 1 0 0 1 1 1 1 Transcription initiation factor TFIID subunit A TFIID-18kDa PF02269.11 gi|154150614|ref|YP_001404232.1| - 0.0097 15.6 0.1 0.015 15.1 0.0 1.3 1 1 0 1 1 1 1 Transcription initiation factor IID, 18kD subunit PCP_red PF08369.5 gi|154150614|ref|YP_001404232.1| - 0.017 14.9 2.9 0.22 11.4 0.1 2.3 2 1 0 2 2 2 0 Proto-chlorophyllide reductase 57 kD subunit AAA_32 PF13654.1 gi|154150614|ref|YP_001404232.1| - 0.031 12.9 0.6 0.029 13.0 0.4 1.1 1 0 0 1 1 1 0 AAA domain ADH_zinc_N PF00107.21 gi|154150614|ref|YP_001404232.1| - 0.1 12.1 0.3 0.12 11.9 0.2 1.1 1 0 0 1 1 1 0 Zinc-binding dehydrogenase DUF1192 PF06698.6 gi|154150614|ref|YP_001404232.1| - 2.1 8.2 4.3 10 6.0 2.7 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1192) AIRS PF00586.19 gi|154150616|ref|YP_001404234.1| - 9.2e-22 77.1 1.3 1.5e-21 76.4 0.2 1.9 2 1 0 2 2 2 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.17 gi|154150616|ref|YP_001404234.1| - 1.6e-14 54.1 0.4 4.6e-14 52.7 0.0 2.0 2 1 0 2 2 2 1 AIR synthase related protein, C-terminal domain DUF2016 PF09436.5 gi|154150616|ref|YP_001404234.1| - 0.044 13.3 0.0 0.097 12.2 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF2016) AAA PF00004.24 gi|154150617|ref|YP_001404235.1| - 3.1e-11 43.5 0.0 8.2e-11 42.2 0.0 1.8 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.10 gi|154150617|ref|YP_001404235.1| - 2.6e-08 32.9 0.0 0.0005 18.8 0.0 2.3 2 0 0 2 2 2 2 Rad17 cell cycle checkpoint protein AAA_22 PF13401.1 gi|154150617|ref|YP_001404235.1| - 1.7e-05 24.9 0.0 0.0019 18.3 0.0 2.7 1 1 0 1 1 1 1 AAA domain RuvB_N PF05496.7 gi|154150617|ref|YP_001404235.1| - 5e-05 22.4 0.0 0.00014 20.9 0.0 1.8 2 0 0 2 2 2 1 Holliday junction DNA helicase ruvB N-terminus AAA_16 PF13191.1 gi|154150617|ref|YP_001404235.1| - 0.00073 19.5 0.4 0.0036 17.3 0.0 2.2 2 1 0 2 2 2 1 AAA ATPase domain AAA_10 PF12846.2 gi|154150617|ref|YP_001404235.1| - 0.013 14.9 0.4 0.084 12.2 0.0 2.2 2 1 1 3 3 3 0 AAA-like domain Bac_DnaA PF00308.13 gi|154150617|ref|YP_001404235.1| - 0.018 14.7 0.0 0.04 13.5 0.0 1.6 1 0 0 1 1 1 0 Bacterial dnaA protein AAA_24 PF13479.1 gi|154150617|ref|YP_001404235.1| - 0.02 14.4 0.0 0.054 13.0 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_14 PF13173.1 gi|154150617|ref|YP_001404235.1| - 0.022 14.6 0.0 0.043 13.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.12 gi|154150617|ref|YP_001404235.1| - 0.024 14.0 0.0 0.071 12.5 0.0 1.8 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_5 PF07728.9 gi|154150617|ref|YP_001404235.1| - 0.03 14.0 0.0 0.066 12.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) RNA_helicase PF00910.17 gi|154150617|ref|YP_001404235.1| - 0.049 13.7 0.0 0.098 12.8 0.0 1.5 1 0 0 1 1 1 0 RNA helicase DUF815 PF05673.8 gi|154150617|ref|YP_001404235.1| - 0.053 12.4 0.0 0.12 11.3 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_17 PF13207.1 gi|154150617|ref|YP_001404235.1| - 0.077 13.8 0.1 0.4 11.5 0.0 2.2 2 0 0 2 2 2 0 AAA domain CagY_M PF07337.6 gi|154150617|ref|YP_001404235.1| - 0.087 12.3 0.0 0.26 10.7 0.0 1.8 1 0 0 1 1 1 0 DC-EC Repeat UPF0146 PF03686.8 gi|154150618|ref|YP_001404236.1| - 1.1e-22 80.1 0.0 1.3e-22 79.9 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0146) DUF4535 PF15054.1 gi|154150618|ref|YP_001404236.1| - 0.069 12.5 0.2 0.14 11.5 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4535) Shal-type PF11601.3 gi|154150618|ref|YP_001404236.1| - 0.15 11.6 0.1 0.27 10.7 0.1 1.4 1 0 0 1 1 1 0 Shal-type voltage-gated potassium channels Peptidase_M54 PF07998.6 gi|154150619|ref|YP_001404237.1| - 1.3e-19 70.6 0.0 1.6e-19 70.4 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M54 Peptidase_M10 PF00413.19 gi|154150619|ref|YP_001404237.1| - 0.00041 20.0 0.0 0.00048 19.8 0.0 1.3 1 0 0 1 1 1 1 Matrixin Metallopep PF12044.3 gi|154150619|ref|YP_001404237.1| - 0.063 11.7 1.5 0.092 11.1 0.8 1.4 1 1 1 2 2 2 0 Putative peptidase family Reprolysin_3 PF13582.1 gi|154150619|ref|YP_001404237.1| - 0.069 13.6 0.1 0.09 13.3 0.1 1.3 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Reprolysin_4 PF13583.1 gi|154150619|ref|YP_001404237.1| - 0.073 12.5 0.1 0.083 12.3 0.0 1.2 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Reprolysin_5 PF13688.1 gi|154150619|ref|YP_001404237.1| - 0.09 12.6 0.0 0.1 12.4 0.0 1.2 1 0 0 1 1 1 0 Metallo-peptidase family M12 Reprolysin_2 PF13574.1 gi|154150619|ref|YP_001404237.1| - 0.15 12.0 0.0 0.17 11.9 0.0 1.2 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like RDD PF06271.7 gi|154150621|ref|YP_001404239.1| - 4.4e-19 68.7 7.8 5.3e-19 68.4 5.4 1.1 1 0 0 1 1 1 1 RDD family DUF4648 PF15505.1 gi|154150622|ref|YP_001404240.1| - 0.06 13.5 0.1 11 6.1 0.0 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4648) Lactamase_B PF00753.22 gi|154150623|ref|YP_001404241.1| - 8.7e-20 71.1 0.4 1.2e-19 70.6 0.3 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|154150623|ref|YP_001404241.1| - 7.2e-06 25.6 0.1 1.1e-05 25.0 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.1 gi|154150623|ref|YP_001404241.1| - 0.0017 18.0 0.4 0.0032 17.2 0.3 1.6 1 1 0 1 1 1 1 Beta-lactamase superfamily domain HxlR PF01638.12 gi|154150624|ref|YP_001404242.1| - 9.2e-32 108.5 0.0 1.1e-31 108.3 0.0 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix PadR PF03551.9 gi|154150624|ref|YP_001404242.1| - 0.0021 17.7 0.0 0.0032 17.2 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_34 PF13601.1 gi|154150624|ref|YP_001404242.1| - 0.0029 17.6 0.0 0.0043 17.0 0.0 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain YHS PF04945.8 gi|154150624|ref|YP_001404242.1| - 0.026 14.3 0.5 0.051 13.4 0.3 1.5 1 0 0 1 1 1 0 YHS domain MarR PF01047.17 gi|154150624|ref|YP_001404242.1| - 0.04 13.6 0.0 0.063 12.9 0.0 1.4 1 0 0 1 1 1 0 MarR family Tautomerase PF01361.16 gi|154150625|ref|YP_001404243.1| - 8.9e-10 38.0 0.1 1.1e-09 37.7 0.1 1.0 1 0 0 1 1 1 1 Tautomerase enzyme Tautomerase_2 PF14552.1 gi|154150625|ref|YP_001404243.1| - 9e-06 25.6 0.0 9.3e-06 25.5 0.0 1.0 1 0 0 1 1 1 1 Tautomerase enzyme PemK PF02452.12 gi|154150626|ref|YP_001404244.1| - 2.7e-10 40.4 0.0 3e-10 40.2 0.0 1.0 1 0 0 1 1 1 1 PemK-like protein ABC_tran PF00005.22 gi|154150627|ref|YP_001404245.1| - 5e-20 72.2 2.4 5.1e-08 33.2 0.2 4.5 3 2 0 3 3 3 3 ABC transporter SMC_N PF02463.14 gi|154150627|ref|YP_001404245.1| - 1.2e-11 44.2 2.2 0.014 14.6 0.6 4.1 3 1 0 3 3 3 3 RecF/RecN/SMC N terminal domain AAA_21 PF13304.1 gi|154150627|ref|YP_001404245.1| - 1.3e-08 35.2 5.0 0.016 15.1 0.0 4.3 4 0 0 4 4 4 2 AAA domain AAA_29 PF13555.1 gi|154150627|ref|YP_001404245.1| - 4.5e-08 32.4 0.1 0.0054 16.2 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_22 PF13401.1 gi|154150627|ref|YP_001404245.1| - 6.4e-07 29.5 4.3 0.45 10.6 0.0 4.7 5 0 0 5 5 4 1 AAA domain AAA_14 PF13173.1 gi|154150627|ref|YP_001404245.1| - 2.1e-06 27.6 0.1 0.11 12.4 0.0 3.5 3 0 0 3 3 3 2 AAA domain DUF258 PF03193.11 gi|154150627|ref|YP_001404245.1| - 1.8e-05 23.9 0.1 0.097 11.8 0.0 2.4 2 0 0 2 2 2 2 Protein of unknown function, DUF258 AAA_25 PF13481.1 gi|154150627|ref|YP_001404245.1| - 2e-05 24.1 0.2 0.1 12.0 0.0 3.3 4 0 0 4 4 4 2 AAA domain DnaJ_CXXCXGXG PF00684.14 gi|154150627|ref|YP_001404245.1| - 2.9e-05 24.0 3.4 0.016 15.2 0.1 3.4 3 0 0 3 3 3 1 DnaJ central domain AAA_16 PF13191.1 gi|154150627|ref|YP_001404245.1| - 4e-05 23.6 3.7 0.2 11.6 1.0 3.5 2 1 0 2 2 2 2 AAA ATPase domain KaiC PF06745.8 gi|154150627|ref|YP_001404245.1| - 6.1e-05 22.2 0.1 0.13 11.3 0.0 2.8 2 0 0 2 2 2 2 KaiC AAA_33 PF13671.1 gi|154150627|ref|YP_001404245.1| - 0.00015 21.6 0.2 0.23 11.3 0.0 2.8 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.1 gi|154150627|ref|YP_001404245.1| - 0.00024 21.4 2.7 0.16 12.3 0.0 3.5 4 0 0 4 4 2 1 AAA domain AAA_15 PF13175.1 gi|154150627|ref|YP_001404245.1| - 0.00027 20.1 0.4 1.1 8.2 0.0 3.7 4 0 0 4 4 4 1 AAA ATPase domain AAA_19 PF13245.1 gi|154150627|ref|YP_001404245.1| - 0.00033 20.3 0.2 0.41 10.4 0.0 3.1 2 0 0 2 2 2 1 Part of AAA domain Viral_helicase1 PF01443.13 gi|154150627|ref|YP_001404245.1| - 0.00046 19.7 0.0 0.49 9.8 0.0 2.7 2 0 0 2 2 2 2 Viral (Superfamily 1) RNA helicase DUF2075 PF09848.4 gi|154150627|ref|YP_001404245.1| - 0.00071 18.6 0.1 0.24 10.3 0.0 2.4 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) APS_kinase PF01583.15 gi|154150627|ref|YP_001404245.1| - 0.0012 18.4 2.2 0.64 9.6 0.0 3.7 3 0 0 3 3 3 1 Adenylylsulphate kinase T2SE PF00437.15 gi|154150627|ref|YP_001404245.1| - 0.002 17.1 0.4 0.67 8.8 0.0 2.4 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_17 PF13207.1 gi|154150627|ref|YP_001404245.1| - 0.002 18.9 9.5 0.12 13.2 0.6 3.7 3 0 0 3 3 3 1 AAA domain AAA_23 PF13476.1 gi|154150627|ref|YP_001404245.1| - 0.0022 18.3 6.3 0.0092 16.3 0.1 2.9 2 1 0 2 2 2 1 AAA domain AAA_10 PF12846.2 gi|154150627|ref|YP_001404245.1| - 0.0028 17.1 0.2 3.1 7.1 0.0 2.7 2 0 0 2 2 2 2 AAA-like domain NACHT PF05729.7 gi|154150627|ref|YP_001404245.1| - 0.003 17.2 0.2 1.7 8.3 0.0 2.5 2 0 0 2 2 2 1 NACHT domain cobW PF02492.14 gi|154150627|ref|YP_001404245.1| - 0.007 15.8 1.1 2.2 7.7 0.1 2.9 3 0 0 3 3 2 1 CobW/HypB/UreG, nucleotide-binding domain AAA_30 PF13604.1 gi|154150627|ref|YP_001404245.1| - 0.0081 15.7 0.4 7.6 6.0 0.0 3.4 3 0 0 3 3 3 0 AAA domain ArgK PF03308.11 gi|154150627|ref|YP_001404245.1| - 0.012 14.4 0.1 1.5 7.5 0.0 2.5 2 0 0 2 2 2 0 ArgK protein BCA_ABC_TP_C PF12399.3 gi|154150627|ref|YP_001404245.1| - 0.014 15.0 1.3 0.55 9.9 0.0 2.8 2 0 0 2 2 2 0 Branched-chain amino acid ATP-binding cassette transporter AAA_28 PF13521.1 gi|154150627|ref|YP_001404245.1| - 0.022 14.7 0.4 1.3 8.9 0.0 2.7 2 0 0 2 2 2 0 AAA domain Lar_restr_allev PF14354.1 gi|154150627|ref|YP_001404245.1| - 0.025 14.8 5.4 5 7.5 0.2 3.4 3 0 0 3 3 3 0 Restriction alleviation protein Lar RNA_helicase PF00910.17 gi|154150627|ref|YP_001404245.1| - 0.031 14.4 0.1 10 6.3 0.0 2.9 3 0 0 3 3 2 0 RNA helicase MobB PF03205.9 gi|154150627|ref|YP_001404245.1| - 0.031 13.9 0.7 6.9 6.3 0.0 2.9 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B NTPase_1 PF03266.10 gi|154150627|ref|YP_001404245.1| - 0.054 13.2 2.5 9 5.9 0.0 3.4 3 0 0 3 3 3 0 NTPase Miro PF08477.8 gi|154150627|ref|YP_001404245.1| - 0.055 13.9 2.6 25 5.3 0.1 4.2 5 0 0 5 5 3 0 Miro-like protein Arch_ATPase PF01637.13 gi|154150627|ref|YP_001404245.1| - 0.059 13.0 1.2 2.7 7.6 0.0 3.2 3 0 0 3 3 3 0 Archaeal ATPase PRK PF00485.13 gi|154150627|ref|YP_001404245.1| - 0.066 12.7 0.1 7.6 6.0 0.0 2.6 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family DUF4350 PF14258.1 gi|154150627|ref|YP_001404245.1| - 0.068 13.3 0.2 1.2 9.3 0.0 2.7 3 0 0 3 3 2 0 Domain of unknown function (DUF4350) NB-ARC PF00931.17 gi|154150627|ref|YP_001404245.1| - 0.17 10.7 0.6 10 4.8 0.0 2.8 3 0 0 3 3 3 0 NB-ARC domain DAP3 PF10236.4 gi|154150627|ref|YP_001404245.1| - 0.17 10.7 0.5 14 4.5 0.0 2.3 2 0 0 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 SbcCD_C PF13558.1 gi|154150627|ref|YP_001404245.1| - 0.7 9.8 3.6 23 5.0 0.1 3.7 3 2 0 3 3 2 0 Putative exonuclease SbcCD, C subunit Zn-ribbon_8 PF09723.5 gi|154150627|ref|YP_001404245.1| - 2.6 8.0 9.9 0.9 9.5 0.2 3.6 3 0 0 3 3 3 0 Zinc ribbon domain 5_nucleotid_C PF02872.13 gi|154150629|ref|YP_001404247.1| - 4.5e-34 117.6 3.5 1.2e-33 116.2 0.8 2.3 2 0 0 2 2 2 1 5'-nucleotidase, C-terminal domain SBBP PF06739.6 gi|154150630|ref|YP_001404248.1| - 6.3 6.6 9.1 34 4.3 0.0 4.7 5 0 0 5 5 5 0 Beta-propeller repeat HTH_20 PF12840.2 gi|154150632|ref|YP_001404250.1| - 5.1e-06 26.1 0.1 1.2e-05 25.0 0.0 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_24 PF13412.1 gi|154150632|ref|YP_001404250.1| - 9.6e-06 24.9 0.0 2.2e-05 23.7 0.0 1.6 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.15 gi|154150632|ref|YP_001404250.1| - 1e-05 25.1 0.0 1.5e-05 24.5 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family RPA_C PF08784.6 gi|154150632|ref|YP_001404250.1| - 3.3e-05 24.2 0.0 5.5e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Replication protein A C terminal MarR_2 PF12802.2 gi|154150632|ref|YP_001404250.1| - 0.00011 21.8 0.1 0.00016 21.2 0.1 1.4 1 0 0 1 1 1 1 MarR family Rrf2 PF02082.15 gi|154150632|ref|YP_001404250.1| - 0.00085 19.3 0.0 0.0019 18.2 0.0 1.5 2 0 0 2 2 2 1 Transcriptional regulator HTH_Crp_2 PF13545.1 gi|154150632|ref|YP_001404250.1| - 0.0012 18.6 0.1 0.0032 17.2 0.0 1.7 1 1 1 2 2 2 1 Crp-like helix-turn-helix domain GerE PF00196.14 gi|154150632|ref|YP_001404250.1| - 0.0039 16.4 0.0 0.0066 15.7 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family MarR PF01047.17 gi|154150632|ref|YP_001404250.1| - 0.0064 16.1 0.0 0.011 15.4 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_23 PF13384.1 gi|154150632|ref|YP_001404250.1| - 0.0078 15.8 0.0 0.037 13.6 0.0 2.0 2 0 0 2 2 2 1 Homeodomain-like domain TrmB PF01978.14 gi|154150632|ref|YP_001404250.1| - 0.015 15.0 0.0 0.025 14.2 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Fe_dep_repress PF01325.14 gi|154150632|ref|YP_001404250.1| - 0.021 14.7 0.0 1.1 9.2 0.0 2.1 1 1 1 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain Sigma70_r4 PF04545.11 gi|154150632|ref|YP_001404250.1| - 0.021 14.1 0.1 0.12 11.7 0.0 2.2 2 0 0 2 2 2 0 Sigma-70, region 4 Sigma70_r4_2 PF08281.7 gi|154150632|ref|YP_001404250.1| - 0.022 14.1 0.0 0.051 13.0 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 DUF4423 PF14394.1 gi|154150632|ref|YP_001404250.1| - 0.033 13.7 0.0 0.044 13.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) EAP30 PF04157.11 gi|154150632|ref|YP_001404250.1| - 0.069 12.3 0.0 0.099 11.7 0.0 1.2 1 0 0 1 1 1 0 EAP30/Vps36 family HTH_15 PF12324.3 gi|154150632|ref|YP_001404250.1| - 0.075 12.6 0.0 0.17 11.5 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of alkylmercury lyase Spo0A_C PF08769.6 gi|154150632|ref|YP_001404250.1| - 0.14 12.0 0.0 0.25 11.2 0.0 1.4 1 0 0 1 1 1 0 Sporulation initiation factor Spo0A C terminal HTH_40 PF14493.1 gi|154150632|ref|YP_001404250.1| - 0.15 12.2 0.0 0.22 11.7 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Cpn10 PF00166.16 gi|154150633|ref|YP_001404251.1| - 7e-26 90.0 0.7 7.6e-26 89.8 0.5 1.0 1 0 0 1 1 1 1 Chaperonin 10 Kd subunit DUF2124 PF09897.4 gi|154150633|ref|YP_001404251.1| - 0.024 14.2 0.0 0.028 14.1 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2124) Cpn60_TCP1 PF00118.19 gi|154150634|ref|YP_001404252.1| - 1.6e-118 396.3 17.7 1.9e-118 396.2 12.3 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family SurA_N PF09312.6 gi|154150634|ref|YP_001404252.1| - 0.012 15.4 1.0 0.1 12.4 0.0 2.7 2 1 0 2 2 2 0 SurA N-terminal domain Helicase_C PF00271.26 gi|154150635|ref|YP_001404253.1| - 5.2e-22 77.4 0.0 8.6e-20 70.3 0.0 2.3 2 0 0 2 2 2 2 Helicase conserved C-terminal domain DEAD PF00270.24 gi|154150635|ref|YP_001404253.1| - 4.8e-18 65.2 0.0 9.5e-18 64.2 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.10 gi|154150635|ref|YP_001404253.1| - 6.3e-05 22.8 0.0 0.00039 20.3 0.0 2.0 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit SecA_DEAD PF07517.9 gi|154150635|ref|YP_001404253.1| - 0.061 12.5 0.0 0.1 11.8 0.0 1.3 1 0 0 1 1 1 0 SecA DEAD-like domain UvrC_HhH_N PF08459.6 gi|154150636|ref|YP_001404254.1| - 2.7e-54 182.8 0.0 5.4e-54 181.9 0.0 1.5 1 0 0 1 1 1 1 UvrC Helix-hairpin-helix N-terminal GIY-YIG PF01541.19 gi|154150636|ref|YP_001404254.1| - 1.3e-11 44.6 0.6 5.6e-11 42.6 0.0 2.4 3 0 0 3 3 3 1 GIY-YIG catalytic domain UVR PF02151.14 gi|154150636|ref|YP_001404254.1| - 2.4e-06 26.8 0.9 6.8e-06 25.4 0.6 1.9 1 0 0 1 1 1 1 UvrB/uvrC motif Rubrerythrin PF02915.12 gi|154150637|ref|YP_001404255.1| - 3.1e-05 24.3 0.0 4.1e-05 23.9 0.0 1.2 1 0 0 1 1 1 1 Rubrerythrin DUF2383 PF09537.5 gi|154150637|ref|YP_001404255.1| - 0.00094 19.4 0.0 0.0014 18.8 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF2383) COQ7 PF03232.8 gi|154150637|ref|YP_001404255.1| - 0.0028 17.1 0.1 0.003 17.0 0.0 1.2 1 0 0 1 1 1 1 Ubiquinone biosynthesis protein COQ7 PP_kinase_N PF13089.1 gi|154150637|ref|YP_001404255.1| - 0.063 13.3 0.0 0.079 13.0 0.0 1.3 1 0 0 1 1 1 0 Polyphosphate kinase N-terminal domain DUF2388 PF09498.5 gi|154150637|ref|YP_001404255.1| - 0.087 12.4 0.1 0.13 11.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2388) Linocin_M18 PF04454.7 gi|154150638|ref|YP_001404256.1| - 1.5e-76 256.6 0.0 1.8e-76 256.4 0.0 1.0 1 0 0 1 1 1 1 Encapsulating protein for peroxidase Phage_capsid PF05065.8 gi|154150638|ref|YP_001404256.1| - 0.012 14.8 0.1 0.017 14.2 0.1 1.2 1 0 0 1 1 1 0 Phage capsid family Carcinustatin PF08261.7 gi|154150638|ref|YP_001404256.1| - 0.96 10.1 3.4 9.6 7.1 0.6 2.8 2 0 0 2 2 2 0 Carcinustatin peptide CARDB PF07705.6 gi|154150639|ref|YP_001404257.1| - 0.039 14.0 0.0 0.058 13.4 0.0 1.2 1 0 0 1 1 1 0 CARDB QueC PF06508.8 gi|154150640|ref|YP_001404258.1| - 6.1e-69 231.4 0.0 6.9e-69 231.3 0.0 1.0 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC ATP_bind_3 PF01171.15 gi|154150640|ref|YP_001404258.1| - 5.7e-06 25.9 0.0 1e-05 25.1 0.0 1.4 1 0 0 1 1 1 1 PP-loop family tRNA_Me_trans PF03054.11 gi|154150640|ref|YP_001404258.1| - 1.1e-05 24.1 0.0 3e-05 22.7 0.0 1.6 2 0 0 2 2 2 1 tRNA methyl transferase ThiI PF02568.9 gi|154150640|ref|YP_001404258.1| - 4.1e-05 23.1 0.0 4.9e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) Asn_synthase PF00733.16 gi|154150640|ref|YP_001404258.1| - 0.00017 21.1 0.0 0.00025 20.6 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase NAD_synthase PF02540.12 gi|154150640|ref|YP_001404258.1| - 0.032 13.1 0.0 0.037 12.9 0.0 1.1 1 0 0 1 1 1 0 NAD synthase CheW PF01584.14 gi|154150641|ref|YP_001404259.1| - 2.2e-26 91.9 0.8 2.5e-26 91.7 0.5 1.0 1 0 0 1 1 1 1 CheW-like domain MCPsignal PF00015.16 gi|154150642|ref|YP_001404260.1| - 6.8e-49 166.2 56.6 1e-44 152.6 24.7 2.6 1 1 2 3 3 3 2 Methyl-accepting chemotaxis protein (MCP) signalling domain PAS_9 PF13426.1 gi|154150642|ref|YP_001404260.1| - 6.8e-08 32.8 0.5 1.7e-06 28.2 0.0 2.7 2 0 0 2 2 2 1 PAS domain PAS_4 PF08448.5 gi|154150642|ref|YP_001404260.1| - 4.7e-05 23.3 0.0 0.00029 20.8 0.0 2.4 2 0 0 2 2 2 1 PAS fold PAS_8 PF13188.1 gi|154150642|ref|YP_001404260.1| - 0.00012 21.7 0.2 0.00068 19.4 0.0 2.3 2 0 0 2 2 2 1 PAS domain PAS PF00989.19 gi|154150642|ref|YP_001404260.1| - 0.00039 20.1 0.2 0.0014 18.3 0.0 2.1 2 0 0 2 2 1 1 PAS fold AAA_13 PF13166.1 gi|154150642|ref|YP_001404260.1| - 0.00056 18.5 11.3 0.00056 18.5 7.8 2.3 1 1 0 2 2 2 1 AAA domain DUF948 PF06103.6 gi|154150642|ref|YP_001404260.1| - 0.00069 19.4 3.2 0.00069 19.4 2.2 5.1 3 2 2 5 5 4 1 Bacterial protein of unknown function (DUF948) Seryl_tRNA_N PF02403.17 gi|154150642|ref|YP_001404260.1| - 0.0012 18.8 2.8 0.0012 18.8 2.0 4.4 1 1 3 4 4 4 1 Seryl-tRNA synthetase N-terminal domain DUF2365 PF10157.4 gi|154150642|ref|YP_001404260.1| - 0.0055 16.5 3.5 0.0055 16.5 2.4 3.9 2 2 0 4 4 4 1 Uncharacterized conserved protein (DUF2365) DUF812 PF05667.6 gi|154150642|ref|YP_001404260.1| - 0.0075 14.8 1.3 0.0075 14.8 0.9 3.4 2 1 2 4 4 4 1 Protein of unknown function (DUF812) CENP-F_leu_zip PF10473.4 gi|154150642|ref|YP_001404260.1| - 0.01 15.6 1.2 0.01 15.6 0.9 3.2 1 1 2 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Cortex-I_coil PF09304.5 gi|154150642|ref|YP_001404260.1| - 0.026 14.5 0.1 0.026 14.5 0.1 3.9 1 1 3 4 4 4 0 Cortexillin I, coiled coil CENP-Q PF13094.1 gi|154150642|ref|YP_001404260.1| - 0.058 13.4 13.8 0.02 14.8 2.2 3.6 2 2 1 3 3 3 0 CENP-Q, a CENPA-CAD centromere complex subunit Laminin_II PF06009.7 gi|154150642|ref|YP_001404260.1| - 0.095 12.4 38.7 0.2 11.3 6.6 4.7 1 1 2 4 4 4 0 Laminin Domain II PAS_7 PF12860.2 gi|154150642|ref|YP_001404260.1| - 0.11 12.4 0.1 0.11 12.4 0.1 3.2 3 2 1 4 4 3 0 PAS fold Spc7 PF08317.6 gi|154150642|ref|YP_001404260.1| - 0.27 9.8 23.9 0.11 11.0 1.5 3.7 1 1 4 5 5 5 0 Spc7 kinetochore protein DUF3037 PF11236.3 gi|154150642|ref|YP_001404260.1| - 0.46 10.5 5.6 0.19 11.8 0.8 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF3037) Fib_alpha PF08702.5 gi|154150642|ref|YP_001404260.1| - 0.46 10.6 22.6 0.11 12.5 2.8 4.6 2 2 2 4 4 4 0 Fibrinogen alpha/beta chain family PhageMin_Tail PF10145.4 gi|154150642|ref|YP_001404260.1| - 0.54 9.8 44.2 1.4 8.4 16.0 3.1 1 1 1 2 2 2 0 Phage-related minor tail protein Laminin_I PF06008.9 gi|154150642|ref|YP_001404260.1| - 0.62 9.3 34.4 0.62 9.3 3.5 4.2 1 1 3 4 4 3 0 Laminin Domain I FH2 PF02181.18 gi|154150642|ref|YP_001404260.1| - 0.75 8.6 13.7 0.29 9.9 1.5 2.6 1 1 1 2 2 2 0 Formin Homology 2 Domain FlaC_arch PF05377.6 gi|154150642|ref|YP_001404260.1| - 0.78 9.6 16.0 0.4 10.6 0.1 5.1 4 1 1 5 5 5 0 Flagella accessory protein C (FlaC) DUF1664 PF07889.7 gi|154150642|ref|YP_001404260.1| - 0.92 9.3 24.2 0.049 13.4 2.1 4.2 2 2 1 3 3 3 0 Protein of unknown function (DUF1664) Uds1 PF15456.1 gi|154150642|ref|YP_001404260.1| - 1.8 8.5 17.3 2.3 8.2 0.8 3.6 2 2 2 4 4 4 0 Up-regulated During Septation Sulfatase_C PF14707.1 gi|154150642|ref|YP_001404260.1| - 2.5 8.3 9.5 4.6 7.5 0.2 4.5 4 1 1 5 5 4 0 C-terminal region of aryl-sulfatase DUF3450 PF11932.3 gi|154150642|ref|YP_001404260.1| - 2.8 7.1 26.2 3 7.0 2.9 3.5 2 2 1 3 3 3 0 Protein of unknown function (DUF3450) Tweety PF04906.8 gi|154150642|ref|YP_001404260.1| - 3 6.1 15.7 1.6 7.0 1.0 2.8 2 1 0 3 3 3 0 Tweety Reo_sigmaC PF04582.7 gi|154150642|ref|YP_001404260.1| - 3 6.9 28.0 0.16 11.1 8.6 3.4 1 1 1 3 3 3 0 Reovirus sigma C capsid protein Tropomyosin PF00261.15 gi|154150642|ref|YP_001404260.1| - 3.3 6.7 28.1 0.92 8.5 5.0 3.4 2 2 1 3 3 3 0 Tropomyosin Syntaxin-6_N PF09177.6 gi|154150642|ref|YP_001404260.1| - 3.6 8.0 22.0 1.2 9.6 0.8 5.2 3 2 3 6 6 5 0 Syntaxin 6, N-terminal Vps53_N PF04100.7 gi|154150642|ref|YP_001404260.1| - 3.6 6.2 27.6 0.03 13.1 4.3 3.5 1 1 3 4 4 4 0 Vps53-like, N-terminal Atg14 PF10186.4 gi|154150642|ref|YP_001404260.1| - 3.9 6.3 9.2 1.5 7.6 1.5 2.3 2 0 0 2 2 2 0 UV radiation resistance protein and autophagy-related subunit 14 Syntaxin PF00804.20 gi|154150642|ref|YP_001404260.1| - 4.2 7.6 22.4 13 6.0 3.4 4.4 1 1 2 3 3 3 0 Syntaxin DNA_repr_REX1B PF14966.1 gi|154150642|ref|YP_001404260.1| - 6.4 7.2 8.9 17 5.8 0.2 3.8 2 2 0 3 3 3 0 DNA repair REX1-B TPR_MLP1_2 PF07926.7 gi|154150642|ref|YP_001404260.1| - 8.7 6.1 28.2 19 5.0 5.6 4.1 2 2 1 3 3 3 0 TPR/MLP1/MLP2-like protein Grp1_Fun34_YaaH PF01184.14 gi|154150643|ref|YP_001404261.1| - 3e-45 154.0 26.7 3.8e-45 153.7 18.5 1.0 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family PAS_9 PF13426.1 gi|154150644|ref|YP_001404262.1| - 6.8e-33 113.1 0.0 2e-11 44.2 0.0 4.2 4 0 0 4 4 4 3 PAS domain PAS_4 PF08448.5 gi|154150644|ref|YP_001404262.1| - 8.7e-27 93.3 0.2 1.7e-09 37.7 0.0 3.5 3 0 0 3 3 3 3 PAS fold PAS PF00989.19 gi|154150644|ref|YP_001404262.1| - 5.1e-20 71.3 0.0 5.4e-06 26.1 0.0 3.9 3 0 0 3 3 3 3 PAS fold PAS_3 PF08447.6 gi|154150644|ref|YP_001404262.1| - 3.3e-09 36.7 0.1 9e-06 25.7 0.0 3.2 3 0 0 3 3 3 2 PAS fold PAS_8 PF13188.1 gi|154150644|ref|YP_001404262.1| - 2.9e-06 26.9 0.1 3.2 7.7 0.0 4.7 4 0 0 4 4 4 2 PAS domain HTH_IclR PF09339.5 gi|154150644|ref|YP_001404262.1| - 0.00017 21.1 0.0 0.00047 19.6 0.0 1.7 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_Crp_2 PF13545.1 gi|154150644|ref|YP_001404262.1| - 0.00044 19.9 0.5 0.0026 17.5 0.0 2.5 3 0 0 3 3 3 1 Crp-like helix-turn-helix domain HTH_23 PF13384.1 gi|154150644|ref|YP_001404262.1| - 0.0045 16.5 0.0 0.019 14.5 0.0 2.1 1 0 0 1 1 1 1 Homeodomain-like domain HisKA PF00512.20 gi|154150644|ref|YP_001404262.1| - 0.0071 16.3 0.9 0.031 14.2 0.1 2.5 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HTH_11 PF08279.7 gi|154150644|ref|YP_001404262.1| - 0.009 15.6 0.5 0.096 12.3 0.0 2.4 2 0 0 2 2 2 1 HTH domain HTH_24 PF13412.1 gi|154150644|ref|YP_001404262.1| - 0.025 13.9 0.0 0.076 12.4 0.0 1.8 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_28 PF13518.1 gi|154150644|ref|YP_001404262.1| - 0.053 13.5 0.0 0.19 11.7 0.0 2.0 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_20 PF12840.2 gi|154150644|ref|YP_001404262.1| - 0.071 12.9 0.1 0.2 11.4 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_36 PF13730.1 gi|154150644|ref|YP_001404262.1| - 0.15 12.2 0.0 0.43 10.7 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain Response_reg PF00072.19 gi|154150645|ref|YP_001404263.1| - 1.2e-18 67.0 0.0 1.4e-18 66.9 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain AICARFT_IMPCHas PF01808.13 gi|154150645|ref|YP_001404263.1| - 0.15 11.1 0.0 0.15 11.1 0.0 1.0 1 0 0 1 1 1 0 AICARFT/IMPCHase bienzyme HATPase_c PF02518.21 gi|154150647|ref|YP_001404265.1| - 1.9e-11 43.6 0.1 3.8e-11 42.6 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_4 PF08448.5 gi|154150647|ref|YP_001404265.1| - 2.9e-07 30.4 0.0 8.7e-07 28.9 0.0 1.8 1 1 0 1 1 1 1 PAS fold PAS_9 PF13426.1 gi|154150647|ref|YP_001404265.1| - 1.2e-05 25.5 0.0 6.4e-05 23.2 0.0 2.2 1 1 0 1 1 1 1 PAS domain PAS_8 PF13188.1 gi|154150647|ref|YP_001404265.1| - 2.5e-05 23.9 0.0 6.3e-05 22.6 0.0 1.6 1 0 0 1 1 1 1 PAS domain HATPase_c_2 PF13581.1 gi|154150647|ref|YP_001404265.1| - 0.002 17.8 0.0 0.0039 16.9 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS PF00989.19 gi|154150647|ref|YP_001404265.1| - 0.0034 17.1 0.1 0.016 14.9 0.1 2.1 1 1 0 1 1 1 1 PAS fold DUF2569 PF10754.4 gi|154150647|ref|YP_001404265.1| - 4.9 7.3 12.1 0.24 11.5 4.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2569) RuBisCO_large PF00016.15 gi|154150648|ref|YP_001404266.1| - 6.7e-78 261.6 1.9 8.9e-78 261.2 1.3 1.1 1 0 0 1 1 1 1 Ribulose bisphosphate carboxylase large chain, catalytic domain RuBisCO_large_N PF02788.11 gi|154150648|ref|YP_001404266.1| - 2.5e-26 91.8 0.0 7.4e-26 90.3 0.0 1.8 2 0 0 2 2 2 1 Ribulose bisphosphate carboxylase large chain, N-terminal domain UvrB PF12344.3 gi|154150649|ref|YP_001404267.1| - 1.8e-22 78.6 3.6 2.8e-22 77.9 1.7 2.0 2 0 0 2 2 2 1 Ultra-violet resistance protein B Helicase_C PF00271.26 gi|154150649|ref|YP_001404267.1| - 1.7e-15 56.5 0.1 3.7e-15 55.5 0.1 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|154150649|ref|YP_001404267.1| - 2.4e-11 43.7 1.8 4.6e-10 39.6 0.0 3.1 3 1 0 3 3 3 1 Type III restriction enzyme, res subunit UVR PF02151.14 gi|154150649|ref|YP_001404267.1| - 1.2e-08 34.2 1.1 4.7e-08 32.2 0.8 2.2 1 0 0 1 1 1 1 UvrB/uvrC motif AAA_19 PF13245.1 gi|154150649|ref|YP_001404267.1| - 1.1e-05 25.1 0.8 0.0088 15.7 0.0 3.4 4 0 0 4 4 4 2 Part of AAA domain AAA_30 PF13604.1 gi|154150649|ref|YP_001404267.1| - 3.7e-05 23.4 0.5 0.039 13.5 0.0 2.7 2 1 0 2 2 2 2 AAA domain DEAD PF00270.24 gi|154150649|ref|YP_001404267.1| - 5e-05 22.8 0.0 0.01 15.3 0.0 3.4 3 0 0 3 3 3 1 DEAD/DEAH box helicase AAA_22 PF13401.1 gi|154150649|ref|YP_001404267.1| - 0.033 14.3 0.1 0.52 10.4 0.0 2.9 3 2 0 3 3 3 0 AAA domain DAP3 PF10236.4 gi|154150649|ref|YP_001404267.1| - 0.037 12.9 0.0 1.6 7.5 0.0 2.5 2 0 0 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 Flavi_DEAD PF07652.9 gi|154150649|ref|YP_001404267.1| - 0.056 13.1 0.8 0.23 11.2 0.1 2.4 3 0 0 3 3 3 0 Flavivirus DEAD domain UvrD-helicase PF00580.16 gi|154150649|ref|YP_001404267.1| - 0.13 11.5 9.3 1.3 8.2 3.1 2.4 2 1 0 2 2 2 0 UvrD/REP helicase N-terminal domain PAS_9 PF13426.1 gi|154150650|ref|YP_001404268.1| - 3.2e-27 94.9 0.1 1.4e-14 54.2 0.0 2.3 2 0 0 2 2 2 2 PAS domain PAS PF00989.19 gi|154150650|ref|YP_001404268.1| - 4.9e-15 55.2 0.1 2e-09 37.2 0.0 2.3 2 0 0 2 2 2 2 PAS fold PAS_4 PF08448.5 gi|154150650|ref|YP_001404268.1| - 4.5e-14 52.4 0.0 1.8e-09 37.6 0.0 2.7 2 1 0 2 2 2 2 PAS fold PAS_8 PF13188.1 gi|154150650|ref|YP_001404268.1| - 1.6e-11 43.5 0.0 1.4e-06 27.9 0.0 2.5 2 0 0 2 2 2 2 PAS domain PAS_3 PF08447.6 gi|154150650|ref|YP_001404268.1| - 3.6e-08 33.3 0.0 0.00016 21.6 0.0 2.4 2 0 0 2 2 2 2 PAS fold PAS_7 PF12860.2 gi|154150650|ref|YP_001404268.1| - 6.9e-07 29.2 0.1 0.00057 19.8 0.0 2.9 2 2 0 2 2 2 2 PAS fold HisKA PF00512.20 gi|154150650|ref|YP_001404268.1| - 0.0061 16.5 0.3 0.35 10.8 0.1 2.9 1 1 1 2 2 2 1 His Kinase A (phospho-acceptor) domain DUF4118 PF13493.1 gi|154150650|ref|YP_001404268.1| - 1.1 9.4 17.3 1.8 8.7 12.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4118) DNA_pol_B PF00136.16 gi|154150651|ref|YP_001404269.1| - 4.4e-59 200.4 0.1 6.8e-59 199.8 0.1 1.2 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.14 gi|154150651|ref|YP_001404269.1| - 1.2e-30 106.5 0.0 9.4e-30 103.5 0.0 2.4 1 1 0 1 1 1 1 DNA polymerase family B, exonuclease domain RNase_H_2 PF13482.1 gi|154150651|ref|YP_001404269.1| - 0.0013 18.5 0.0 0.0073 16.1 0.0 2.3 2 1 0 2 2 2 1 RNase_H superfamily Ldh_1_N PF00056.18 gi|154150652|ref|YP_001404270.1| - 1.1e-21 77.1 0.0 1.6e-21 76.5 0.0 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.13 gi|154150652|ref|YP_001404270.1| - 1.5e-14 54.1 0.0 8.1e-14 51.7 0.0 1.9 1 1 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain 2-Hacid_dh_C PF02826.14 gi|154150652|ref|YP_001404270.1| - 0.031 13.4 0.0 0.053 12.6 0.0 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ThiF PF00899.16 gi|154150652|ref|YP_001404270.1| - 0.11 12.3 0.2 0.18 11.5 0.1 1.4 1 0 0 1 1 1 0 ThiF family DHO_dh PF01180.16 gi|154150653|ref|YP_001404271.1| - 2.1e-54 184.4 0.3 3.5e-54 183.7 0.2 1.2 1 1 0 1 1 1 1 Dihydroorotate dehydrogenase Dus PF01207.12 gi|154150653|ref|YP_001404271.1| - 2.6e-08 33.0 0.0 9.2e-05 21.4 0.0 2.0 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) NMO PF03060.10 gi|154150653|ref|YP_001404271.1| - 8.9e-06 25.0 0.8 8.9e-06 25.0 0.6 1.6 2 0 0 2 2 2 1 Nitronate monooxygenase DUF561 PF04481.7 gi|154150653|ref|YP_001404271.1| - 0.00092 18.2 0.9 0.0023 16.9 0.1 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF561) His_biosynth PF00977.16 gi|154150653|ref|YP_001404271.1| - 0.0014 17.9 0.1 0.0052 16.0 0.0 1.9 2 0 0 2 2 2 1 Histidine biosynthesis protein IMPDH PF00478.20 gi|154150653|ref|YP_001404271.1| - 0.047 12.5 0.2 0.076 11.8 0.1 1.2 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain PcrB PF01884.12 gi|154150653|ref|YP_001404271.1| - 0.061 12.5 0.0 0.5 9.5 0.0 2.0 2 0 0 2 2 2 0 PcrB family DHODB_Fe-S_bind PF10418.4 gi|154150654|ref|YP_001404272.1| - 2.5e-14 52.4 5.5 4.6e-14 51.6 3.8 1.5 1 0 0 1 1 1 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B NAD_binding_1 PF00175.16 gi|154150654|ref|YP_001404272.1| - 3.2e-13 50.1 0.0 5.2e-13 49.5 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.19 gi|154150654|ref|YP_001404272.1| - 8.7e-05 22.5 0.1 0.00043 20.3 0.1 2.1 1 1 0 1 1 1 1 Oxidoreductase FAD-binding domain Fer2_3 PF13085.1 gi|154150654|ref|YP_001404272.1| - 0.09 12.6 0.8 0.18 11.6 0.6 1.4 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain HATPase_c PF02518.21 gi|154150655|ref|YP_001404273.1| - 1.2e-09 37.8 0.0 2.3e-09 36.9 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_9 PF13426.1 gi|154150655|ref|YP_001404273.1| - 4.5e-09 36.6 0.1 1.8e-05 25.0 0.0 3.3 2 1 0 2 2 2 2 PAS domain PAS PF00989.19 gi|154150655|ref|YP_001404273.1| - 1.3e-08 34.6 0.4 1.8e-06 27.7 0.0 2.6 3 0 0 3 3 3 1 PAS fold PAS_8 PF13188.1 gi|154150655|ref|YP_001404273.1| - 6.6e-08 32.1 0.1 1.1e-06 28.2 0.0 2.4 2 0 0 2 2 2 1 PAS domain DUF4118 PF13493.1 gi|154150655|ref|YP_001404273.1| - 3.6e-05 23.8 14.9 6.5e-05 23.0 10.3 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4118) PAS_4 PF08448.5 gi|154150655|ref|YP_001404273.1| - 0.00018 21.5 0.0 0.00061 19.8 0.0 1.9 2 0 0 2 2 2 1 PAS fold SPOB_a PF14689.1 gi|154150655|ref|YP_001404273.1| - 0.0012 18.3 0.6 0.0036 16.8 0.1 2.1 2 0 0 2 2 2 1 Sensor_kinase_SpoOB-type, alpha-helical domain HisKA PF00512.20 gi|154150655|ref|YP_001404273.1| - 0.0029 17.5 1.0 0.03 14.3 0.0 2.4 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain IncA PF04156.9 gi|154150655|ref|YP_001404273.1| - 3 7.3 7.0 0.17 11.4 0.1 2.1 2 0 0 2 2 2 0 IncA protein PAS_9 PF13426.1 gi|154150656|ref|YP_001404274.1| - 1.8e-08 34.6 0.0 4.3e-08 33.4 0.0 1.6 1 1 1 2 2 2 1 PAS domain PAS_8 PF13188.1 gi|154150656|ref|YP_001404274.1| - 2.2e-07 30.4 0.0 5.9e-07 29.1 0.0 1.7 1 0 0 1 1 1 1 PAS domain PAS PF00989.19 gi|154150656|ref|YP_001404274.1| - 0.00025 20.7 0.0 0.00052 19.7 0.0 1.5 1 0 0 1 1 1 1 PAS fold PAS_4 PF08448.5 gi|154150656|ref|YP_001404274.1| - 0.0008 19.4 0.0 0.0013 18.7 0.0 1.4 1 0 0 1 1 1 1 PAS fold DUF4118 PF13493.1 gi|154150656|ref|YP_001404274.1| - 0.054 13.6 18.8 0.09 12.9 13.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4118) DegQ PF08181.6 gi|154150656|ref|YP_001404274.1| - 0.078 12.6 2.1 0.16 11.7 1.5 1.5 1 0 0 1 1 1 0 DegQ (SacQ) family UL73_N PF12522.3 gi|154150656|ref|YP_001404274.1| - 0.17 11.4 1.0 0.34 10.4 0.7 1.5 1 0 0 1 1 1 0 Cytomegalovirus glycoprotein N terminal NTP_transf_3 PF12804.2 gi|154150657|ref|YP_001404275.1| - 2.1e-29 102.6 0.0 2.5e-29 102.4 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.14 gi|154150657|ref|YP_001404275.1| - 0.00088 18.8 0.0 0.0011 18.5 0.0 1.1 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Glycos_transf_2 PF00535.21 gi|154150657|ref|YP_001404275.1| - 0.046 13.3 0.0 0.06 13.0 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferase family 2 ApbA_C PF08546.6 gi|154150658|ref|YP_001404276.1| - 8.2e-35 119.5 0.0 1.4e-34 118.7 0.0 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA C terminal ApbA PF02558.11 gi|154150658|ref|YP_001404276.1| - 1.2e-24 86.4 0.0 1.9e-24 85.8 0.0 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_Gly3P_dh_N PF01210.18 gi|154150658|ref|YP_001404276.1| - 0.0014 18.3 0.1 0.0089 15.7 0.0 2.2 2 1 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TrkA_N PF02254.13 gi|154150658|ref|YP_001404276.1| - 0.016 15.2 0.1 0.027 14.4 0.1 1.4 1 0 0 1 1 1 0 TrkA-N domain Pyr_redox PF00070.22 gi|154150658|ref|YP_001404276.1| - 0.097 13.0 0.3 0.27 11.6 0.2 1.8 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase DNA_binding_1 PF01035.15 gi|154150659|ref|YP_001404277.1| - 5.2e-27 93.4 0.0 7.7e-27 92.8 0.0 1.3 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain Sigma70_r4_2 PF08281.7 gi|154150659|ref|YP_001404277.1| - 0.055 12.9 0.0 0.56 9.7 0.0 2.1 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_AsnC-type PF13404.1 gi|154150659|ref|YP_001404277.1| - 0.15 11.6 0.0 0.27 10.8 0.0 1.3 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain Helicase_C_2 PF13307.1 gi|154150660|ref|YP_001404278.1| - 3.9e-29 101.7 0.0 7.4e-29 100.8 0.0 1.4 1 0 0 1 1 1 1 Helicase C-terminal domain DEAD_2 PF06733.10 gi|154150660|ref|YP_001404278.1| - 3e-21 75.5 0.3 3.7e-14 52.5 0.0 2.8 2 1 0 2 2 2 2 DEAD_2 ResIII PF04851.10 gi|154150660|ref|YP_001404278.1| - 1.5e-05 24.8 0.2 0.013 15.3 0.0 2.4 2 0 0 2 2 2 2 Type III restriction enzyme, res subunit DEAD PF00270.24 gi|154150660|ref|YP_001404278.1| - 0.00022 20.7 0.2 0.25 10.8 0.0 2.3 2 0 0 2 2 2 2 DEAD/DEAH box helicase AAA_22 PF13401.1 gi|154150660|ref|YP_001404278.1| - 0.0072 16.4 0.7 0.54 10.3 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_19 PF13245.1 gi|154150660|ref|YP_001404278.1| - 0.016 14.9 0.8 0.032 13.9 0.1 1.8 2 0 0 2 2 2 0 Part of AAA domain AAA_16 PF13191.1 gi|154150660|ref|YP_001404278.1| - 0.049 13.6 0.6 0.34 10.8 0.0 2.4 3 0 0 3 3 3 0 AAA ATPase domain Lyase_1 PF00206.15 gi|154150661|ref|YP_001404279.1| - 5.9e-54 183.3 0.6 8.1e-54 182.9 0.4 1.1 1 0 0 1 1 1 1 Lyase ADSL_C PF10397.4 gi|154150661|ref|YP_001404279.1| - 2.8e-22 78.5 0.1 8.2e-22 77.0 0.1 1.9 1 0 0 1 1 1 1 Adenylosuccinate lyase C-terminus ASL_C PF08328.6 gi|154150661|ref|YP_001404279.1| - 0.039 13.8 0.1 0.095 12.5 0.0 1.7 1 0 0 1 1 1 0 Adenylosuccinate lyase C-terminal PAS PF00989.19 gi|154150662|ref|YP_001404280.1| - 8.2e-22 77.1 0.0 4.1e-10 39.4 0.0 2.7 2 0 0 2 2 2 2 PAS fold HATPase_c PF02518.21 gi|154150662|ref|YP_001404280.1| - 4.7e-19 68.1 0.0 8.6e-19 67.3 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.1 gi|154150662|ref|YP_001404280.1| - 5.1e-19 67.3 0.1 4e-09 36.0 0.1 2.6 2 0 0 2 2 2 2 PAS domain PAS_9 PF13426.1 gi|154150662|ref|YP_001404280.1| - 8.6e-18 64.6 0.0 8.5e-09 35.7 0.0 2.7 3 0 0 3 3 3 2 PAS domain PAS_3 PF08447.6 gi|154150662|ref|YP_001404280.1| - 1.7e-13 50.4 0.0 1.6e-07 31.2 0.0 2.5 2 0 0 2 2 2 2 PAS fold HisKA PF00512.20 gi|154150662|ref|YP_001404280.1| - 5.5e-13 48.6 0.5 9.8e-13 47.9 0.3 1.4 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain PAS_4 PF08448.5 gi|154150662|ref|YP_001404280.1| - 1.1e-08 35.0 0.0 0.0076 16.2 0.0 2.6 2 0 0 2 2 2 2 PAS fold HATPase_c_3 PF13589.1 gi|154150662|ref|YP_001404280.1| - 0.06 13.0 0.0 0.13 11.8 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF4118 PF13493.1 gi|154150662|ref|YP_001404280.1| - 3.3 7.9 10.7 6.3 7.0 7.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4118) Response_reg PF00072.19 gi|154150663|ref|YP_001404281.1| - 2e-17 63.1 0.0 2.2e-17 63.0 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain FleQ PF06490.6 gi|154150663|ref|YP_001404281.1| - 0.00035 20.6 0.0 0.00043 20.3 0.0 1.1 1 0 0 1 1 1 1 Flagellar regulatory protein FleQ STAS PF01740.16 gi|154150663|ref|YP_001404281.1| - 0.015 14.7 0.0 0.018 14.4 0.0 1.2 1 0 0 1 1 1 0 STAS domain CBS PF00571.23 gi|154150663|ref|YP_001404281.1| - 0.067 12.9 0.1 0.36 10.6 0.1 2.1 2 1 0 2 2 2 0 CBS domain PAS_9 PF13426.1 gi|154150664|ref|YP_001404282.1| - 7.7e-63 209.3 0.0 4.9e-10 39.7 0.0 8.4 9 0 0 9 9 9 7 PAS domain PAS PF00989.19 gi|154150664|ref|YP_001404282.1| - 4.3e-54 181.1 0.0 8.8e-08 31.9 0.0 8.7 8 2 0 8 8 8 7 PAS fold PAS_4 PF08448.5 gi|154150664|ref|YP_001404282.1| - 5.7e-49 164.7 11.0 3.1e-10 40.0 0.0 9.1 9 1 0 9 9 9 7 PAS fold PAS_8 PF13188.1 gi|154150664|ref|YP_001404282.1| - 9.4e-32 107.8 0.0 6.2e-06 25.8 0.0 8.5 8 0 0 8 8 8 5 PAS domain PAS_3 PF08447.6 gi|154150664|ref|YP_001404282.1| - 2.8e-28 97.8 0.0 2.8e-08 33.7 0.1 7.2 7 1 0 7 7 7 6 PAS fold Response_reg PF00072.19 gi|154150664|ref|YP_001404282.1| - 3.7e-19 68.7 0.0 7.4e-19 67.8 0.0 1.5 1 0 0 1 1 1 1 Response regulator receiver domain HATPase_c PF02518.21 gi|154150664|ref|YP_001404282.1| - 1.7e-14 53.4 0.1 4.8e-14 52.0 0.0 1.8 2 0 0 2 2 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GAF_2 PF13185.1 gi|154150664|ref|YP_001404282.1| - 4e-14 53.3 0.4 6.7e-13 49.3 0.0 2.9 2 0 0 2 2 2 1 GAF domain PAS_10 PF13596.1 gi|154150664|ref|YP_001404282.1| - 4.4e-05 23.6 0.0 0.23 11.7 0.0 4.3 4 0 0 4 4 4 1 PAS domain GAF_3 PF13492.1 gi|154150664|ref|YP_001404282.1| - 8.7e-05 22.6 0.0 0.00046 20.2 0.0 2.2 2 0 0 2 2 2 1 GAF domain GAF PF01590.21 gi|154150664|ref|YP_001404282.1| - 0.0011 19.1 0.0 0.0036 17.4 0.0 1.9 1 0 0 1 1 1 1 GAF domain HisKA PF00512.20 gi|154150664|ref|YP_001404282.1| - 0.0023 17.9 0.9 0.0048 16.8 0.0 2.1 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.1 gi|154150664|ref|YP_001404282.1| - 0.097 12.3 0.0 0.26 10.9 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y2_Tnp PF04986.8 gi|154150664|ref|YP_001404282.1| - 0.28 10.8 0.0 0.48 10.1 0.0 1.3 1 0 0 1 1 1 0 Putative transposase Oxidored_q6 PF01058.17 gi|154150665|ref|YP_001404283.1| - 9.1e-20 70.6 0.0 1.2e-19 70.1 0.0 1.2 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Complex1_49kDa PF00346.14 gi|154150666|ref|YP_001404284.1| - 3.5e-20 72.1 0.0 2.4e-14 52.9 0.0 2.1 1 1 1 2 2 2 2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Complex1_30kDa PF00329.14 gi|154150666|ref|YP_001404284.1| - 8.2e-19 67.7 0.0 1.4e-18 67.0 0.0 1.4 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NiFeSe_Hases PF00374.14 gi|154150666|ref|YP_001404284.1| - 4.9e-05 22.3 0.5 0.012 14.4 0.2 2.1 2 0 0 2 2 2 2 Nickel-dependent hydrogenase Oxidored_q1 PF00361.15 gi|154150667|ref|YP_001404285.1| - 3.6e-48 164.1 26.3 3.6e-48 164.1 18.2 2.1 3 0 0 3 3 3 1 NADH-Ubiquinone/plastoquinone (complex I), various chains Oxidored_q1 PF00361.15 gi|154150670|ref|YP_001404288.1| - 6.5e-52 176.4 29.2 6.5e-52 176.4 20.3 3.2 4 1 0 4 4 4 1 NADH-Ubiquinone/plastoquinone (complex I), various chains Oxidored_q1_N PF00662.15 gi|154150670|ref|YP_001404288.1| - 1.5e-05 24.4 0.0 0.00018 20.9 0.0 3.0 1 0 0 1 1 1 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Acetyltransf_7 PF13508.1 gi|154150671|ref|YP_001404289.1| - 1.2e-13 50.9 0.1 1.6e-13 50.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|154150671|ref|YP_001404289.1| - 2e-09 37.4 0.1 3.5e-09 36.6 0.1 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|154150671|ref|YP_001404289.1| - 2.5e-09 37.2 0.0 3e-09 37.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|154150671|ref|YP_001404289.1| - 3.1e-08 33.5 0.2 4.8e-08 32.9 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.1 gi|154150671|ref|YP_001404289.1| - 0.00098 19.3 0.0 0.0013 18.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|154150671|ref|YP_001404289.1| - 0.0033 17.1 0.0 0.0054 16.4 0.0 1.4 1 1 0 1 1 1 1 FR47-like protein DUF2148 PF09918.4 gi|154150673|ref|YP_001404291.1| - 2.6e-33 113.5 1.5 6.1e-33 112.3 0.6 2.0 2 0 0 2 2 2 1 Uncharacterized protein containing a ferredoxin domain (DUF2148) FeS PF04060.8 gi|154150673|ref|YP_001404291.1| - 0.0006 19.3 3.7 0.0015 18.0 2.6 1.6 1 0 0 1 1 1 1 Putative Fe-S cluster Nitroreductase PF00881.19 gi|154150673|ref|YP_001404291.1| - 0.0044 16.8 0.0 0.0057 16.4 0.0 1.1 1 0 0 1 1 1 1 Nitroreductase family NYAP_C PF15452.1 gi|154150673|ref|YP_001404291.1| - 0.079 11.9 1.3 0.11 11.4 0.7 1.4 1 1 0 1 1 1 0 Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter TrmB PF01978.14 gi|154150674|ref|YP_001404292.1| - 2.9e-05 23.7 0.0 4.1e-05 23.1 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.2 gi|154150674|ref|YP_001404292.1| - 0.0022 17.6 0.1 0.003 17.1 0.1 1.3 1 0 0 1 1 1 1 MarR family DUF387 PF04079.11 gi|154150674|ref|YP_001404292.1| - 0.015 14.6 0.0 0.023 14.0 0.0 1.3 1 1 0 1 1 1 0 Putative transcriptional regulators (Ypuh-like) PadR PF03551.9 gi|154150674|ref|YP_001404292.1| - 0.075 12.8 0.0 0.18 11.5 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family Pyridox_oxidase PF01243.15 gi|154150675|ref|YP_001404293.1| - 6.9e-18 64.4 0.0 8.7e-18 64.1 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase DUF447 PF04289.7 gi|154150675|ref|YP_001404293.1| - 0.0035 16.9 0.0 0.0039 16.7 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF447) Pyridox_oxase_2 PF12766.2 gi|154150675|ref|YP_001404293.1| - 0.038 14.2 0.0 0.061 13.6 0.0 1.4 1 0 0 1 1 1 0 Pyridoxamine 5'-phosphate oxidase MTH865 PF07747.6 gi|154150676|ref|YP_001404294.1| - 6.5e-31 105.7 0.2 7.4e-31 105.6 0.1 1.0 1 0 0 1 1 1 1 MTH865-like family HTH_5 PF01022.15 gi|154150677|ref|YP_001404295.1| - 1.2e-07 31.2 0.0 2.6e-07 30.1 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|154150677|ref|YP_001404295.1| - 3.9e-06 26.5 0.0 9e-06 25.4 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_45 PF14947.1 gi|154150677|ref|YP_001404295.1| - 0.00036 20.2 0.0 0.00099 18.8 0.0 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_24 PF13412.1 gi|154150677|ref|YP_001404295.1| - 0.0016 17.7 0.1 0.0056 16.0 0.0 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_34 PF13601.1 gi|154150677|ref|YP_001404295.1| - 0.029 14.3 0.0 0.058 13.4 0.0 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain PAH PF02671.16 gi|154150677|ref|YP_001404295.1| - 0.065 12.8 0.1 0.41 10.3 0.1 2.4 1 1 0 1 1 1 0 Paired amphipathic helix repeat THP2 PF09432.5 gi|154150677|ref|YP_001404295.1| - 0.074 12.9 0.1 0.27 11.0 0.0 1.9 1 1 1 2 2 2 0 Tho complex subunit THP2 Img2 PF05046.9 gi|154150677|ref|YP_001404295.1| - 0.076 13.2 0.1 0.2 11.9 0.1 1.9 1 1 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) MFS_1 PF07690.11 gi|154150678|ref|YP_001404296.1| - 2e-47 161.6 62.8 2.7e-30 105.2 20.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.8 gi|154150678|ref|YP_001404296.1| - 1.5e-11 43.0 27.1 1.8e-06 26.3 5.0 2.1 1 1 1 2 2 2 2 Transmembrane secretion effector MFS_2 PF13347.1 gi|154150678|ref|YP_001404296.1| - 2.1e-10 39.5 30.0 5.3e-06 25.0 13.3 2.1 1 1 1 2 2 2 2 MFS/sugar transport protein MFS_1_like PF12832.2 gi|154150678|ref|YP_001404296.1| - 5e-07 29.4 12.0 0.00077 19.2 0.5 3.8 3 1 0 3 3 3 2 MFS_1 like family Sugar_tr PF00083.19 gi|154150678|ref|YP_001404296.1| - 2.9e-06 26.1 32.4 0.0042 15.7 11.3 2.7 2 1 0 2 2 2 2 Sugar (and other) transporter LacY_symp PF01306.14 gi|154150678|ref|YP_001404296.1| - 0.00058 18.5 23.7 0.027 13.0 5.4 2.4 1 1 1 2 2 2 2 LacY proton/sugar symporter Folate_carrier PF01770.13 gi|154150678|ref|YP_001404296.1| - 0.0014 17.1 4.5 0.0014 17.1 3.1 1.8 2 0 0 2 2 2 1 Reduced folate carrier Isochorismatase PF00857.15 gi|154150680|ref|YP_001404298.1| - 6.5e-27 94.5 0.0 8.6e-27 94.1 0.0 1.2 1 0 0 1 1 1 1 Isochorismatase family LigB PF02900.13 gi|154150681|ref|YP_001404299.1| - 2.5e-43 148.0 0.0 2.9e-43 147.8 0.0 1.0 1 0 0 1 1 1 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase Tautomerase PF01361.16 gi|154150682|ref|YP_001404300.1| - 2.9e-11 42.7 0.3 3.5e-11 42.5 0.2 1.1 1 0 0 1 1 1 1 Tautomerase enzyme Tautomerase_2 PF14552.1 gi|154150682|ref|YP_001404300.1| - 2.6e-05 24.1 0.0 2.8e-05 24.0 0.0 1.0 1 0 0 1 1 1 1 Tautomerase enzyme DUF1904 PF08921.6 gi|154150682|ref|YP_001404300.1| - 0.0012 18.8 0.1 0.0013 18.8 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1904) DUF1922 PF09082.5 gi|154150682|ref|YP_001404300.1| - 0.067 13.2 0.4 0.13 12.3 0.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF1922) HATPase_c PF02518.21 gi|154150683|ref|YP_001404301.1| - 1.5e-12 47.1 0.0 3.5e-12 46.0 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_9 PF13426.1 gi|154150683|ref|YP_001404301.1| - 4.5e-08 33.3 0.0 1.2e-07 32.0 0.0 1.8 1 0 0 1 1 1 1 PAS domain PAS PF00989.19 gi|154150683|ref|YP_001404301.1| - 1.7e-07 30.9 0.0 3e-07 30.2 0.0 1.4 1 0 0 1 1 1 1 PAS fold PAS_4 PF08448.5 gi|154150683|ref|YP_001404301.1| - 1e-06 28.7 0.0 1.7e-06 28.0 0.0 1.4 1 0 0 1 1 1 1 PAS fold PAS_8 PF13188.1 gi|154150683|ref|YP_001404301.1| - 1.9e-05 24.3 0.0 4.5e-05 23.1 0.0 1.6 1 0 0 1 1 1 1 PAS domain DUF1212 PF06738.7 gi|154150683|ref|YP_001404301.1| - 0.09 12.2 1.7 0.19 11.1 1.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1212) HATPase_c_3 PF13589.1 gi|154150683|ref|YP_001404301.1| - 0.2 11.2 0.0 0.4 10.3 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Fer4_NifH PF00142.13 gi|154150685|ref|YP_001404303.1| - 8.2e-130 431.8 0.4 9.3e-130 431.7 0.3 1.0 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CbiA PF01656.18 gi|154150685|ref|YP_001404303.1| - 3.3e-08 33.1 0.2 5.8e-08 32.3 0.1 1.5 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ArsA_ATPase PF02374.10 gi|154150685|ref|YP_001404303.1| - 2.7e-06 26.6 0.4 6.4e-06 25.4 0.3 1.6 1 0 0 1 1 1 1 Anion-transporting ATPase AAA_10 PF12846.2 gi|154150685|ref|YP_001404303.1| - 8.8e-05 22.0 0.0 0.00012 21.6 0.0 1.2 1 0 0 1 1 1 1 AAA-like domain ArgK PF03308.11 gi|154150685|ref|YP_001404303.1| - 0.00021 20.1 0.1 0.00033 19.5 0.0 1.4 1 0 0 1 1 1 1 ArgK protein AAA_16 PF13191.1 gi|154150685|ref|YP_001404303.1| - 0.00069 19.6 0.0 0.0023 17.9 0.0 1.7 2 0 0 2 2 2 1 AAA ATPase domain AAA_31 PF13614.1 gi|154150685|ref|YP_001404303.1| - 0.0017 18.2 0.0 0.0059 16.5 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.1 gi|154150685|ref|YP_001404303.1| - 0.0054 16.8 0.1 0.043 13.9 0.0 2.1 2 1 0 2 2 2 1 AAA domain AAA_25 PF13481.1 gi|154150685|ref|YP_001404303.1| - 0.0057 16.0 0.0 0.012 15.0 0.0 1.5 1 0 0 1 1 1 1 AAA domain MipZ PF09140.6 gi|154150685|ref|YP_001404303.1| - 0.0059 15.7 0.1 0.011 14.8 0.1 1.3 1 0 0 1 1 1 1 ATPase MipZ AAA_19 PF13245.1 gi|154150685|ref|YP_001404303.1| - 0.013 15.2 0.4 0.031 14.0 0.3 1.6 1 0 0 1 1 1 0 Part of AAA domain NB-ARC PF00931.17 gi|154150685|ref|YP_001404303.1| - 0.045 12.5 0.0 0.088 11.6 0.0 1.5 1 0 0 1 1 1 0 NB-ARC domain MobB PF03205.9 gi|154150685|ref|YP_001404303.1| - 0.047 13.3 0.1 0.11 12.1 0.1 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B SRP54 PF00448.17 gi|154150685|ref|YP_001404303.1| - 0.08 12.3 0.6 0.17 11.3 0.4 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain ATP_bind_1 PF03029.12 gi|154150685|ref|YP_001404303.1| - 0.091 12.2 0.0 0.15 11.5 0.0 1.5 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein DUF87 PF01935.12 gi|154150685|ref|YP_001404303.1| - 0.13 12.0 0.1 0.23 11.2 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function DUF87 AAA_24 PF13479.1 gi|154150685|ref|YP_001404303.1| - 0.13 11.7 0.3 0.25 10.8 0.2 1.4 1 0 0 1 1 1 0 AAA domain P-II PF00543.17 gi|154150686|ref|YP_001404304.1| - 2.5e-27 95.3 1.0 2.9e-27 95.1 0.7 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II P-II PF00543.17 gi|154150687|ref|YP_001404305.1| - 2e-21 76.3 0.1 3.7e-21 75.4 0.1 1.4 1 1 0 1 1 1 1 Nitrogen regulatory protein P-II Oxidored_nitro PF00148.14 gi|154150688|ref|YP_001404306.1| - 4.7e-146 486.4 0.4 7.2e-146 485.8 0.3 1.3 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Oxidored_nitro PF00148.14 gi|154150689|ref|YP_001404307.1| - 1.8e-130 435.2 0.2 2e-130 435.0 0.1 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase NMT1 PF09084.6 gi|154150689|ref|YP_001404307.1| - 0.083 12.4 0.0 0.76 9.3 0.0 2.1 1 1 1 2 2 2 0 NMT1/THI5 like Oxidored_nitro PF00148.14 gi|154150690|ref|YP_001404308.1| - 5.1e-121 404.0 1.5 5.8e-121 403.8 1.0 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase DUF619 PF04768.8 gi|154150690|ref|YP_001404308.1| - 0.00047 19.6 0.0 0.00083 18.8 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF619) Oxidored_nitro PF00148.14 gi|154150691|ref|YP_001404309.1| - 7.9e-109 363.9 0.0 9e-109 363.7 0.0 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase 2Fe-2S_thioredx PF01257.14 gi|154150692|ref|YP_001404310.1| - 1.9e-08 33.9 0.1 2.8e-08 33.4 0.1 1.2 1 0 0 1 1 1 1 Thioredoxin-like [2Fe-2S] ferredoxin Suc_Fer-like PF06999.7 gi|154150692|ref|YP_001404310.1| - 6.4e-06 26.3 0.1 2.7e-05 24.3 0.0 1.8 2 0 0 2 2 2 1 Sucrase/ferredoxin-like DUF1636 PF07845.6 gi|154150692|ref|YP_001404310.1| - 0.00046 20.3 0.0 0.00055 20.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1636) AnfO_nitrog PF09582.5 gi|154150693|ref|YP_001404311.1| - 1.2e-66 223.6 0.0 1.4e-66 223.4 0.0 1.0 1 0 0 1 1 1 1 Iron only nitrogenase protein AnfO (AnfO_nitrog) MarC PF01914.12 gi|154150694|ref|YP_001404312.1| - 4.9e-34 117.2 17.7 6e-34 116.9 12.2 1.1 1 0 0 1 1 1 1 MarC family integral membrane protein LysE PF01810.13 gi|154150694|ref|YP_001404312.1| - 0.0035 16.6 12.1 0.0092 15.2 8.4 1.7 1 1 0 1 1 1 1 LysE type translocator Fer4_8 PF13183.1 gi|154150695|ref|YP_001404313.1| - 0.00033 20.6 3.7 0.0078 16.2 0.2 2.5 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|154150695|ref|YP_001404313.1| - 0.00067 20.3 6.6 0.026 15.2 4.5 2.6 1 1 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4 PF00037.22 gi|154150695|ref|YP_001404313.1| - 0.0066 16.0 1.7 0.0066 16.0 1.2 2.2 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_7 PF12838.2 gi|154150695|ref|YP_001404313.1| - 0.016 15.5 7.4 0.037 14.4 1.6 2.6 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|154150695|ref|YP_001404313.1| - 0.017 14.9 0.5 0.017 14.9 0.4 2.5 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|154150695|ref|YP_001404313.1| - 0.021 14.5 5.7 0.023 14.4 0.7 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|154150695|ref|YP_001404313.1| - 0.028 14.7 3.4 0.028 14.7 2.4 2.8 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_9 PF13187.1 gi|154150695|ref|YP_001404313.1| - 0.041 14.1 6.4 0.074 13.3 0.9 2.7 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|154150695|ref|YP_001404313.1| - 0.069 13.5 2.9 0.072 13.5 0.1 2.3 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|154150695|ref|YP_001404313.1| - 0.53 10.6 8.3 0.49 10.7 1.8 2.8 3 0 0 3 3 2 0 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|154150695|ref|YP_001404313.1| - 0.59 10.0 9.6 0.15 11.9 2.0 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.2 gi|154150695|ref|YP_001404313.1| - 1.1 9.3 11.0 0.37 10.8 2.5 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Lactamase_B PF00753.22 gi|154150696|ref|YP_001404314.1| - 3e-24 85.7 0.2 4.6e-24 85.1 0.2 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Flavodoxin_1 PF00258.20 gi|154150696|ref|YP_001404314.1| - 2.7e-11 43.6 0.2 8.6e-11 42.0 0.0 1.9 2 1 0 2 2 2 1 Flavodoxin PGM_PMM_I PF02878.11 gi|154150696|ref|YP_001404314.1| - 0.0049 16.3 0.3 0.027 13.9 0.1 2.1 2 1 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FMN_red PF03358.10 gi|154150696|ref|YP_001404314.1| - 0.04 13.4 0.0 0.075 12.5 0.0 1.4 1 0 0 1 1 1 0 NADPH-dependent FMN reductase FAD-oxidase_C PF02913.14 gi|154150696|ref|YP_001404314.1| - 0.054 12.8 0.0 0.096 11.9 0.0 1.4 1 0 0 1 1 1 0 FAD linked oxidases, C-terminal domain V4R PF02830.13 gi|154150697|ref|YP_001404315.1| - 3.7e-18 65.1 0.1 5.8e-18 64.4 0.1 1.3 1 0 0 1 1 1 1 V4R domain HTH_5 PF01022.15 gi|154150697|ref|YP_001404315.1| - 4.8e-07 29.3 0.0 9.3e-07 28.4 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.2 gi|154150697|ref|YP_001404315.1| - 1.7e-05 24.3 0.0 3.3e-05 23.4 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.5 gi|154150697|ref|YP_001404315.1| - 2.7e-05 23.6 0.0 6e-05 22.5 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_20 PF12840.2 gi|154150697|ref|YP_001404315.1| - 0.0001 22.0 0.0 0.00026 20.7 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain MarR PF01047.17 gi|154150697|ref|YP_001404315.1| - 0.00025 20.6 0.0 0.0004 20.0 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.1 gi|154150697|ref|YP_001404315.1| - 0.015 14.6 0.0 0.027 13.8 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Sulfolobus_pRN PF05584.6 gi|154150697|ref|YP_001404315.1| - 0.067 13.1 0.0 0.21 11.5 0.0 1.8 2 0 0 2 2 2 0 Sulfolobus plasmid regulatory protein Hpr_kinase_C PF07475.7 gi|154150698|ref|YP_001404316.1| - 1.1e-06 28.0 0.0 1.8e-06 27.4 0.0 1.2 1 0 0 1 1 1 1 HPr Serine kinase C-terminal domain PEPCK_ATP PF01293.15 gi|154150698|ref|YP_001404316.1| - 2e-05 23.2 0.0 5.9e-05 21.7 0.0 1.7 2 0 0 2 2 2 1 Phosphoenolpyruvate carboxykinase AAA_33 PF13671.1 gi|154150698|ref|YP_001404316.1| - 0.0036 17.1 0.0 0.0064 16.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain DUF308 PF03729.8 gi|154150699|ref|YP_001404317.1| - 2.9e-17 62.4 52.5 4.6e-10 39.3 12.0 3.7 1 1 3 4 4 4 4 Short repeat of unknown function (DUF308) ABC_tran PF00005.22 gi|154150700|ref|YP_001404318.1| - 2.8e-23 82.7 0.0 4e-23 82.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|154150700|ref|YP_001404318.1| - 1.3e-11 45.0 1.1 7.1e-10 39.3 0.8 2.1 1 1 0 1 1 1 1 AAA domain AAA_10 PF12846.2 gi|154150700|ref|YP_001404318.1| - 1.7e-07 30.9 0.0 0.011 15.1 0.0 2.1 2 0 0 2 2 2 2 AAA-like domain AAA_29 PF13555.1 gi|154150700|ref|YP_001404318.1| - 2.8e-05 23.5 0.0 6e-05 22.4 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.1 gi|154150700|ref|YP_001404318.1| - 0.00018 21.9 0.0 0.00031 21.1 0.0 1.3 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|154150700|ref|YP_001404318.1| - 0.00018 20.8 0.0 0.001 18.3 0.0 1.9 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.1 gi|154150700|ref|YP_001404318.1| - 0.00024 21.2 0.0 0.00059 19.9 0.0 1.6 1 1 0 1 1 1 1 AAA domain DUF258 PF03193.11 gi|154150700|ref|YP_001404318.1| - 0.00099 18.3 0.0 0.0015 17.7 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_16 PF13191.1 gi|154150700|ref|YP_001404318.1| - 0.0015 18.5 0.2 0.0065 16.4 0.1 2.0 1 1 0 1 1 1 1 AAA ATPase domain DUF815 PF05673.8 gi|154150700|ref|YP_001404318.1| - 0.005 15.8 0.0 0.0091 14.9 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) Dynamin_N PF00350.18 gi|154150700|ref|YP_001404318.1| - 0.0061 16.3 0.0 0.014 15.2 0.0 1.6 2 0 0 2 2 2 1 Dynamin family IstB_IS21 PF01695.12 gi|154150700|ref|YP_001404318.1| - 0.007 15.7 0.0 0.013 14.8 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein MMR_HSR1 PF01926.18 gi|154150700|ref|YP_001404318.1| - 0.016 15.2 0.0 0.036 14.0 0.0 1.6 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_28 PF13521.1 gi|154150700|ref|YP_001404318.1| - 0.016 15.1 0.0 0.033 14.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain DUF2813 PF11398.3 gi|154150700|ref|YP_001404318.1| - 0.023 13.7 0.0 0.034 13.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2813) ABC_ATPase PF09818.4 gi|154150700|ref|YP_001404318.1| - 0.024 13.2 0.0 0.42 9.1 0.0 2.2 2 1 0 2 2 2 0 Predicted ATPase of the ABC class ATP-synt_ab PF00006.20 gi|154150700|ref|YP_001404318.1| - 0.026 13.9 0.0 0.041 13.3 0.0 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA PF00004.24 gi|154150700|ref|YP_001404318.1| - 0.038 14.1 0.0 0.098 12.8 0.0 1.8 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Miro PF08477.8 gi|154150700|ref|YP_001404318.1| - 0.046 14.2 0.0 0.078 13.4 0.0 1.3 1 0 0 1 1 1 0 Miro-like protein AAA_15 PF13175.1 gi|154150700|ref|YP_001404318.1| - 0.049 12.6 0.0 1.6 7.6 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain AAA_14 PF13173.1 gi|154150700|ref|YP_001404318.1| - 0.058 13.3 0.0 0.53 10.1 0.0 2.2 2 1 0 2 2 2 0 AAA domain AAA_17 PF13207.1 gi|154150700|ref|YP_001404318.1| - 0.061 14.1 0.0 0.18 12.6 0.0 1.7 1 1 0 2 2 1 0 AAA domain AAA_13 PF13166.1 gi|154150700|ref|YP_001404318.1| - 0.078 11.4 0.1 4.2 5.7 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.1 gi|154150700|ref|YP_001404318.1| - 0.082 12.3 0.2 0.18 11.2 0.0 1.8 2 1 0 2 2 1 0 AAA domain DUF87 PF01935.12 gi|154150700|ref|YP_001404318.1| - 0.16 11.7 0.0 0.26 11.0 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function DUF87 RNA_helicase PF00910.17 gi|154150700|ref|YP_001404318.1| - 0.17 12.0 0.0 0.27 11.4 0.0 1.3 1 0 0 1 1 1 0 RNA helicase Nitroreductase PF00881.19 gi|154150701|ref|YP_001404319.1| - 1.7e-25 89.7 0.0 2e-25 89.5 0.0 1.1 1 0 0 1 1 1 1 Nitroreductase family STAS PF01740.16 gi|154150702|ref|YP_001404320.1| - 1.7e-17 62.8 0.0 2e-17 62.7 0.0 1.0 1 0 0 1 1 1 1 STAS domain STAS_2 PF13466.1 gi|154150702|ref|YP_001404320.1| - 7.8e-14 51.4 0.0 1e-13 51.0 0.0 1.2 1 0 0 1 1 1 1 STAS domain DUF2523 PF10734.4 gi|154150702|ref|YP_001404320.1| - 0.022 14.9 0.2 0.04 14.1 0.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2523) HATPase_c_2 PF13581.1 gi|154150703|ref|YP_001404321.1| - 1.2e-27 96.1 0.0 1.3e-27 96.0 0.0 1.0 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c PF02518.21 gi|154150703|ref|YP_001404321.1| - 3.8e-07 29.7 0.0 5.4e-07 29.3 0.0 1.2 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase STAS PF01740.16 gi|154150704|ref|YP_001404322.1| - 2e-15 56.2 0.0 3.9e-15 55.2 0.0 1.5 1 0 0 1 1 1 1 STAS domain STAS_2 PF13466.1 gi|154150704|ref|YP_001404322.1| - 4.9e-07 29.6 0.0 1.1e-06 28.6 0.0 1.6 1 0 0 1 1 1 1 STAS domain META PF03724.11 gi|154150705|ref|YP_001404323.1| - 0.0053 16.5 0.0 0.0064 16.3 0.0 1.1 1 0 0 1 1 1 1 META domain DUF1801 PF08818.6 gi|154150706|ref|YP_001404324.1| - 0.059 13.4 0.0 0.59 10.2 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DU1801) ATP-synt_A PF00119.15 gi|154150707|ref|YP_001404325.1| - 0.026 14.0 6.0 0.028 13.9 4.2 1.0 1 0 0 1 1 1 0 ATP synthase A chain Colicin_V PF02674.11 gi|154150707|ref|YP_001404325.1| - 0.069 12.9 10.5 0.078 12.8 7.3 1.1 1 0 0 1 1 1 0 Colicin V production protein Spore_III_AF PF09581.5 gi|154150707|ref|YP_001404325.1| - 0.1 12.4 6.3 1.2 8.9 0.2 2.0 1 1 1 2 2 2 0 Stage III sporulation protein AF (Spore_III_AF) OPT PF03169.10 gi|154150707|ref|YP_001404325.1| - 0.17 10.2 6.7 0.18 10.2 4.7 1.0 1 0 0 1 1 1 0 OPT oligopeptide transporter protein FtsX PF02687.16 gi|154150707|ref|YP_001404325.1| - 0.35 10.6 8.5 0.49 10.1 5.9 1.2 1 0 0 1 1 1 0 FtsX-like permease family Peptidase_A24 PF01478.13 gi|154150707|ref|YP_001404325.1| - 0.51 10.5 7.0 0.7 10.0 4.9 1.3 1 1 0 1 1 1 0 Type IV leader peptidase family DUF2304 PF10066.4 gi|154150707|ref|YP_001404325.1| - 1.2 8.9 7.0 1.4 8.7 4.9 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2304) DUF2976 PF11190.3 gi|154150707|ref|YP_001404325.1| - 1.4 8.4 7.2 1.7 8.1 5.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2976) Exosortase_EpsH PF09721.5 gi|154150707|ref|YP_001404325.1| - 1.5 7.9 10.9 1.6 7.8 7.6 1.0 1 0 0 1 1 1 0 Transmembrane exosortase (Exosortase_EpsH) DUF3302 PF11742.3 gi|154150707|ref|YP_001404325.1| - 2.1 8.2 6.2 10 6.0 4.3 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3302) DUF3687 PF12459.3 gi|154150707|ref|YP_001404325.1| - 2.5 7.3 7.7 3.7 6.8 1.5 2.2 2 0 0 2 2 2 0 D-Ala-teichoic acid biosynthesis protein Cytochrom_B_N PF00033.14 gi|154150707|ref|YP_001404325.1| - 2.8 7.2 7.9 3.2 7.0 5.5 1.1 1 0 0 1 1 1 0 Cytochrome b(N-terminal)/b6/petB Tic20 PF09685.5 gi|154150707|ref|YP_001404325.1| - 4.1 7.4 10.4 5.3 7.0 7.2 1.2 1 0 0 1 1 1 0 Tic20-like protein DUF3671 PF12420.3 gi|154150707|ref|YP_001404325.1| - 6.5 6.7 5.9 7.8 6.5 4.1 1.1 1 0 0 1 1 1 0 Protein of unknown function ABC2_membrane_3 PF12698.2 gi|154150707|ref|YP_001404325.1| - 10 5.0 12.5 13 4.7 8.7 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF308 PF03729.8 gi|154150708|ref|YP_001404326.1| - 1.5e-05 24.8 36.9 0.0018 18.2 7.1 3.1 1 1 2 3 3 3 3 Short repeat of unknown function (DUF308) DUF2854 PF11016.3 gi|154150708|ref|YP_001404326.1| - 0.14 11.7 0.0 0.32 10.5 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2854) DUF3093 PF11292.3 gi|154150708|ref|YP_001404326.1| - 2.5 7.9 7.8 0.45 10.2 0.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3093) FAD_binding_3 PF01494.14 gi|154150709|ref|YP_001404327.1| - 3.4e-13 49.3 1.4 4e-09 35.9 0.4 3.0 2 1 0 2 2 2 2 FAD binding domain Lycopene_cycl PF05834.7 gi|154150709|ref|YP_001404327.1| - 5e-13 48.7 0.6 6.5e-06 25.3 0.0 2.4 2 1 0 2 2 2 2 Lycopene cyclase protein DAO PF01266.19 gi|154150709|ref|YP_001404327.1| - 1e-06 27.9 6.4 0.0012 17.7 0.9 2.4 1 1 0 2 2 2 2 FAD dependent oxidoreductase Trp_halogenase PF04820.9 gi|154150709|ref|YP_001404327.1| - 1.8e-06 26.8 0.4 0.03 12.9 0.0 2.8 1 1 0 2 2 2 2 Tryptophan halogenase Pyr_redox_2 PF07992.9 gi|154150709|ref|YP_001404327.1| - 2.8e-06 27.3 0.1 4.8e-06 26.5 0.1 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.2 gi|154150709|ref|YP_001404327.1| - 2.9e-06 26.6 4.7 2.9e-06 26.6 3.3 1.6 2 1 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.19 gi|154150709|ref|YP_001404327.1| - 5.1e-06 25.5 1.7 9.7e-06 24.6 1.2 1.5 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.9 gi|154150709|ref|YP_001404327.1| - 5.3e-05 21.8 0.1 0.00014 20.4 0.2 1.5 2 0 0 2 2 2 1 HI0933-like protein Thi4 PF01946.12 gi|154150709|ref|YP_001404327.1| - 0.00013 21.1 0.1 0.00023 20.3 0.1 1.3 1 0 0 1 1 1 1 Thi4 family NAD_binding_8 PF13450.1 gi|154150709|ref|YP_001404327.1| - 0.00035 20.5 0.6 0.00091 19.2 0.4 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain GIDA PF01134.17 gi|154150709|ref|YP_001404327.1| - 0.0013 17.6 1.1 0.0023 16.8 0.7 1.4 1 0 0 1 1 1 1 Glucose inhibited division protein A ABC-3 PF00950.12 gi|154150710|ref|YP_001404328.1| - 3.7e-56 190.2 33.8 4.3e-56 190.0 23.5 1.0 1 0 0 1 1 1 1 ABC 3 transport family FecCD PF01032.13 gi|154150710|ref|YP_001404328.1| - 4.1e-07 29.1 38.3 6.6e-07 28.4 26.5 1.3 1 1 0 1 1 1 1 FecCD transport family PDGLE PF13190.1 gi|154150710|ref|YP_001404328.1| - 0.94 9.2 0.0 0.94 9.2 0.0 4.1 4 1 1 5 5 5 0 PDGLE domain ABC_tran PF00005.22 gi|154150711|ref|YP_001404329.1| - 2.2e-29 102.5 0.0 3.1e-29 102.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|154150711|ref|YP_001404329.1| - 6.5e-13 49.2 1.3 2.9e-10 40.5 0.9 2.1 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|154150711|ref|YP_001404329.1| - 1.4e-05 24.4 0.0 0.0061 15.8 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.1 gi|154150711|ref|YP_001404329.1| - 0.00027 21.3 0.0 0.00042 20.6 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_10 PF12846.2 gi|154150711|ref|YP_001404329.1| - 0.0005 19.5 0.0 0.0007 19.1 0.0 1.3 1 1 0 1 1 1 1 AAA-like domain AAA_29 PF13555.1 gi|154150711|ref|YP_001404329.1| - 0.00061 19.2 0.0 0.0012 18.2 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.1 gi|154150711|ref|YP_001404329.1| - 0.00063 19.8 0.0 0.011 15.8 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.1 gi|154150711|ref|YP_001404329.1| - 0.00077 19.5 0.3 0.0021 18.1 0.2 1.7 1 1 0 1 1 1 1 AAA ATPase domain SbcCD_C PF13558.1 gi|154150711|ref|YP_001404329.1| - 0.00091 19.1 0.0 0.016 15.0 0.0 2.3 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_17 PF13207.1 gi|154150711|ref|YP_001404329.1| - 0.007 17.1 0.4 0.012 16.4 0.3 1.7 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.1 gi|154150711|ref|YP_001404329.1| - 0.02 14.7 0.0 0.036 13.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain MobB PF03205.9 gi|154150711|ref|YP_001404329.1| - 0.02 14.5 0.0 0.035 13.7 0.0 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B SRPRB PF09439.5 gi|154150711|ref|YP_001404329.1| - 0.026 13.7 0.1 0.16 11.1 0.0 1.9 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit AAA_13 PF13166.1 gi|154150711|ref|YP_001404329.1| - 0.038 12.4 0.0 0.064 11.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain DUF258 PF03193.11 gi|154150711|ref|YP_001404329.1| - 0.049 12.8 0.0 0.085 12.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF258 Miro PF08477.8 gi|154150711|ref|YP_001404329.1| - 0.053 14.0 0.0 0.11 13.0 0.0 1.4 1 0 0 1 1 1 0 Miro-like protein PhoH PF02562.11 gi|154150711|ref|YP_001404329.1| - 0.059 12.5 0.0 0.095 11.9 0.0 1.3 1 0 0 1 1 1 0 PhoH-like protein AAA_14 PF13173.1 gi|154150711|ref|YP_001404329.1| - 0.066 13.1 0.0 0.28 11.0 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA PF00004.24 gi|154150711|ref|YP_001404329.1| - 0.069 13.3 0.0 0.84 9.8 0.0 2.1 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.1 gi|154150711|ref|YP_001404329.1| - 0.069 13.4 0.0 0.12 12.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.1 gi|154150711|ref|YP_001404329.1| - 0.07 13.0 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain DUF3584 PF12128.3 gi|154150711|ref|YP_001404329.1| - 0.072 10.4 0.0 0.088 10.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) NACHT PF05729.7 gi|154150711|ref|YP_001404329.1| - 0.091 12.4 0.0 0.17 11.5 0.0 1.4 1 0 0 1 1 1 0 NACHT domain AAA_25 PF13481.1 gi|154150711|ref|YP_001404329.1| - 0.092 12.1 0.1 0.76 9.1 0.0 2.2 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.18 gi|154150711|ref|YP_001404329.1| - 0.094 12.6 0.0 0.19 11.6 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase ABC_ATPase PF09818.4 gi|154150711|ref|YP_001404329.1| - 0.12 10.8 0.1 9.5 4.6 0.0 2.3 2 1 0 2 2 2 0 Predicted ATPase of the ABC class NB-ARC PF00931.17 gi|154150711|ref|YP_001404329.1| - 0.16 10.7 0.0 0.24 10.2 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain AAA_15 PF13175.1 gi|154150711|ref|YP_001404329.1| - 0.2 10.6 0.1 1.2 8.1 0.0 1.9 2 0 0 2 2 2 0 AAA ATPase domain TroA PF01297.12 gi|154150712|ref|YP_001404330.1| - 3.7e-49 167.2 0.7 4.3e-49 167.0 0.5 1.0 1 0 0 1 1 1 1 Periplasmic solute binding protein family PucR PF07905.6 gi|154150712|ref|YP_001404330.1| - 0.024 14.1 0.0 0.042 13.4 0.0 1.3 1 0 0 1 1 1 0 Purine catabolism regulatory protein-like family Fe_dep_repress PF01325.14 gi|154150713|ref|YP_001404331.1| - 1.1e-08 34.9 0.0 1.4e-08 34.5 0.0 1.2 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain Fe_dep_repr_C PF02742.10 gi|154150713|ref|YP_001404331.1| - 5.6e-08 32.3 0.0 8.4e-08 31.7 0.0 1.3 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain MarR_2 PF12802.2 gi|154150713|ref|YP_001404331.1| - 0.0014 18.2 0.0 0.0024 17.5 0.0 1.4 1 0 0 1 1 1 1 MarR family MarR PF01047.17 gi|154150713|ref|YP_001404331.1| - 0.0039 16.8 0.0 0.0078 15.9 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.1 gi|154150713|ref|YP_001404331.1| - 0.022 14.5 0.0 0.049 13.4 0.0 1.6 1 1 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_Tnp_4 PF13613.1 gi|154150713|ref|YP_001404331.1| - 0.029 13.8 0.0 0.065 12.7 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease Rrf2 PF02082.15 gi|154150713|ref|YP_001404331.1| - 0.035 14.2 0.0 0.052 13.6 0.0 1.4 1 1 0 1 1 1 0 Transcriptional regulator HTH_11 PF08279.7 gi|154150713|ref|YP_001404331.1| - 0.036 13.7 0.0 0.19 11.3 0.0 2.0 1 1 1 2 2 2 0 HTH domain HTH_24 PF13412.1 gi|154150713|ref|YP_001404331.1| - 0.048 13.0 0.0 0.11 11.8 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.5 gi|154150713|ref|YP_001404331.1| - 0.065 12.8 0.0 0.1 12.1 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain TrmB PF01978.14 gi|154150713|ref|YP_001404331.1| - 0.065 12.9 0.0 0.11 12.1 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.12 gi|154150713|ref|YP_001404331.1| - 0.074 12.5 0.0 0.098 12.1 0.0 1.2 1 0 0 1 1 1 0 TFIIE alpha subunit DUF3566 PF12089.3 gi|154150714|ref|YP_001404332.1| - 2.6e-05 24.2 8.4 0.00034 20.6 1.3 2.2 1 1 1 2 2 2 2 Transmembrane domain of unknown function (DUF3566) PAP_central PF04928.12 gi|154150714|ref|YP_001404332.1| - 0.089 11.5 0.2 0.12 11.1 0.1 1.3 1 0 0 1 1 1 0 Poly(A) polymerase central domain Imp-YgjV PF10688.4 gi|154150714|ref|YP_001404332.1| - 0.18 11.2 4.1 0.25 10.7 0.1 2.1 1 1 0 2 2 2 0 Bacterial inner membrane protein DUF1440 PF07274.7 gi|154150714|ref|YP_001404332.1| - 0.4 10.6 3.3 0.8 9.6 2.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1440) EI24 PF07264.6 gi|154150714|ref|YP_001404332.1| - 0.51 9.7 8.3 0.61 9.4 5.8 1.1 1 0 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) DUF2975 PF11188.3 gi|154150714|ref|YP_001404332.1| - 1.3 8.7 8.8 1.6 8.4 6.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) ABC2_membrane_4 PF12730.2 gi|154150714|ref|YP_001404332.1| - 1.4 7.9 17.4 1.7 7.7 12.1 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein SdpI PF13630.1 gi|154150714|ref|YP_001404332.1| - 1.5 8.5 15.8 0.66 9.7 7.3 2.0 1 1 1 2 2 2 0 SdpI/YhfL protein family Caveolin PF01146.12 gi|154150714|ref|YP_001404332.1| - 1.9 8.0 8.7 4.2 6.9 6.0 1.5 1 1 0 1 1 1 0 Caveolin DUF3816 PF12822.2 gi|154150714|ref|YP_001404332.1| - 2.4 8.0 21.6 4 7.3 15.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3816) Yip1 PF04893.12 gi|154150714|ref|YP_001404332.1| - 2.5 7.5 14.5 3.3 7.1 10.0 1.2 1 0 0 1 1 1 0 Yip1 domain SNARE_assoc PF09335.6 gi|154150714|ref|YP_001404332.1| - 4.8 7.4 14.2 1.1 9.4 2.1 2.2 2 0 0 2 2 2 0 SNARE associated Golgi protein TPR_1 PF00515.23 gi|154150715|ref|YP_001404333.1| - 0 2038.9 292.2 1.6e-08 33.7 0.2 117.9 119 0 0 119 119 119 113 Tetratricopeptide repeat TPR_11 PF13414.1 gi|154150715|ref|YP_001404333.1| - 0 2090.5 355.1 9.9e-16 57.1 0.3 65.7 34 12 31 74 74 74 74 TPR repeat TPR_16 PF13432.1 gi|154150715|ref|YP_001404333.1| - 0 1639.9 485.1 6.4e-13 48.9 1.1 70.4 28 13 49 85 85 85 85 Tetratricopeptide repeat TPR_17 PF13431.1 gi|154150715|ref|YP_001404333.1| - 0 1147.1 257.1 1.8e-05 24.5 0.1 112.9 118 0 0 118 118 114 80 Tetratricopeptide repeat TPR_19 PF14559.1 gi|154150715|ref|YP_001404333.1| - 0 1000.0 321.8 1.5e-08 34.8 0.2 65.8 35 12 36 74 74 74 71 Tetratricopeptide repeat TPR_2 PF07719.12 gi|154150715|ref|YP_001404333.1| - 0 1922.2 400.3 1e-07 31.3 0.1 118.6 120 0 0 120 120 118 117 Tetratricopeptide repeat TPR_8 PF13181.1 gi|154150715|ref|YP_001404333.1| - 0 1013.8 209.0 4.7e-05 22.8 0.0 110.9 100 16 17 117 117 114 70 Tetratricopeptide repeat TPR_12 PF13424.1 gi|154150715|ref|YP_001404333.1| - 7.6e-302 974.2 374.2 4.8e-13 48.8 0.7 66.7 13 11 68 81 81 81 77 Tetratricopeptide repeat TPR_14 PF13428.1 gi|154150715|ref|YP_001404333.1| - 1.4e-281 882.8 436.6 3.5e-06 27.1 0.0 110.6 3 3 109 115 115 115 92 Tetratricopeptide repeat TPR_9 PF13371.1 gi|154150715|ref|YP_001404333.1| - 7.4e-243 785.0 310.2 8.1e-09 35.2 1.1 68.4 20 17 57 80 80 80 72 Tetratricopeptide repeat Apc3 PF12895.2 gi|154150715|ref|YP_001404333.1| - 4.6e-238 770.1 172.9 2.7e-10 40.2 0.4 49.1 15 10 32 56 56 56 50 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.1 gi|154150715|ref|YP_001404333.1| - 2.6e-155 494.7 320.5 0.013 15.9 0.0 109.0 117 1 1 118 118 112 30 Tetratricopeptide repeat TPR_7 PF13176.1 gi|154150715|ref|YP_001404333.1| - 2e-126 402.0 287.7 0.099 12.4 0.1 98.0 96 11 12 108 108 100 28 Tetratricopeptide repeat NARP1 PF12569.3 gi|154150715|ref|YP_001404333.1| - 3.4e-47 161.3 97.0 0.065 11.9 0.1 39.6 14 10 25 43 43 43 14 NMDA receptor-regulated protein 1 BTAD PF03704.12 gi|154150715|ref|YP_001404333.1| - 1.8e-45 154.8 209.4 0.00051 20.3 0.3 41.6 13 12 30 47 47 46 16 Bacterial transcriptional activator domain Fis1_TPR_C PF14853.1 gi|154150715|ref|YP_001404333.1| - 3.5e-40 135.6 163.8 0.0058 16.4 0.1 56.5 49 14 20 69 69 61 10 Fis1 C-terminal tetratricopeptide repeat Paf67 PF10255.4 gi|154150715|ref|YP_001404333.1| - 2.6e-31 108.9 40.0 0.0022 16.9 0.1 30.1 23 10 11 37 37 37 5 RNA polymerase I-associated factor PAF67 TPR_20 PF14561.1 gi|154150715|ref|YP_001404333.1| - 2e-29 101.5 165.4 0.89 9.7 0.7 46.0 27 10 20 55 55 54 8 Tetratricopeptide repeat DUF3856 PF12968.2 gi|154150715|ref|YP_001404333.1| - 3.3e-27 95.0 153.6 1.5 8.6 0.0 56.4 27 17 26 60 60 58 4 Domain of Unknown Function (DUF3856) TPR_4 PF07721.9 gi|154150715|ref|YP_001404333.1| - 1.2e-22 77.9 206.5 0.073 13.5 0.1 55.4 65 1 1 66 66 49 4 Tetratricopeptide repeat Coatomer_E PF04733.9 gi|154150715|ref|YP_001404333.1| - 1.6e-14 53.7 42.5 0.16 11.1 0.1 19.5 19 5 4 23 23 22 5 Coatomer epsilon subunit TOM20_plant PF06552.7 gi|154150715|ref|YP_001404333.1| - 3.3e-14 52.8 35.4 0.44 10.1 0.0 22.7 23 5 3 26 26 25 2 Plant specific mitochondrial import receptor subunit TOM20 PPR PF01535.15 gi|154150715|ref|YP_001404333.1| - 8.4e-11 41.0 31.0 1.1e+02 3.0 0.0 25.4 29 0 0 29 29 20 0 PPR repeat TPR_15 PF13429.1 gi|154150715|ref|YP_001404333.1| - 4.9e-10 38.9 195.7 0.098 11.6 4.9 31.4 10 8 24 36 36 36 9 Tetratricopeptide repeat PPTA PF01239.17 gi|154150715|ref|YP_001404333.1| - 1e-05 24.6 12.6 0.26 10.7 0.0 10.3 12 0 0 12 12 8 1 Protein prenyltransferase alpha subunit repeat FAT PF02259.18 gi|154150715|ref|YP_001404333.1| - 2.2e-05 23.6 27.2 1.8 7.4 0.1 15.7 13 5 0 15 15 13 1 FAT domain ChAPs PF09295.5 gi|154150715|ref|YP_001404333.1| - 0.00018 20.4 2.0 1.3 7.7 0.0 6.3 6 1 1 7 7 7 1 ChAPs (Chs5p-Arf1p-binding proteins) DUF1358 PF07096.6 gi|154150715|ref|YP_001404333.1| - 0.00051 19.7 8.8 4.3 7.0 0.0 9.7 12 2 1 13 13 10 0 Protein of unknown function (DUF1358) APP_E2 PF12925.2 gi|154150715|ref|YP_001404333.1| - 0.0043 16.6 2.2 7.3 6.1 0.0 6.2 7 0 0 7 7 4 0 E2 domain of amyloid precursor protein FAD_binding_4 PF01565.18 gi|154150715|ref|YP_001404333.1| - 0.013 15.0 0.1 11 5.4 0.0 5.2 5 0 0 5 5 4 0 FAD binding domain DUF1293 PF06950.6 gi|154150715|ref|YP_001404333.1| - 0.045 13.6 0.0 1e+02 2.8 0.0 6.4 6 0 0 6 6 4 0 Protein of unknown function (DUF1293) NRDE-2 PF08424.5 gi|154150715|ref|YP_001404333.1| - 0.28 10.0 0.0 16 4.2 0.0 3.4 2 0 0 2 2 2 0 NRDE-2, necessary for RNA interference ADPrib_exo_Tox PF03496.9 gi|154150715|ref|YP_001404333.1| - 0.62 9.2 0.0 1.3e+02 1.6 0.0 4.4 5 1 0 5 5 3 0 ADP-ribosyltransferase exoenzyme TruB_N PF01509.13 gi|154150715|ref|YP_001404333.1| - 0.67 10.1 0.0 1.6e+02 2.3 0.0 5.2 4 0 0 4 4 2 0 TruB family pseudouridylate synthase (N terminal domain) DUF1347 PF07079.6 gi|154150715|ref|YP_001404333.1| - 1.1 7.3 0.5 2.2e+02 -0.2 0.0 4.8 6 0 0 6 6 6 0 Protein of unknown function (DUF1347) TPR_3 PF07720.7 gi|154150715|ref|YP_001404333.1| - 4.4 7.2 159.4 3.1 7.6 0.3 41.9 51 1 1 52 52 41 0 Tetratricopeptide repeat Band_7 PF01145.20 gi|154150716|ref|YP_001404334.1| - 9.6e-31 107.0 1.2 1.3e-30 106.6 0.8 1.2 1 0 0 1 1 1 1 SPFH domain / Band 7 family DUF1829 PF08862.5 gi|154150716|ref|YP_001404334.1| - 0.0054 16.9 0.0 0.014 15.6 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function DUF1829 Band_7_1 PF13421.1 gi|154150716|ref|YP_001404334.1| - 0.02 14.4 0.0 0.031 13.7 0.0 1.3 1 0 0 1 1 1 0 SPFH domain-Band 7 family HAD_2 PF13419.1 gi|154150718|ref|YP_001404336.1| - 7.7e-31 107.6 0.0 9.5e-31 107.3 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 gi|154150718|ref|YP_001404336.1| - 1.2e-10 42.1 0.0 2.6e-09 37.8 0.0 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.1 gi|154150718|ref|YP_001404336.1| - 4.2e-10 39.1 0.4 5.1e-09 35.7 0.0 2.7 3 1 1 4 4 4 1 HAD-hyrolase-like HAD PF12710.2 gi|154150718|ref|YP_001404336.1| - 0.022 14.9 0.0 0.038 14.1 0.0 1.5 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.1 gi|154150718|ref|YP_001404336.1| - 0.04 13.8 0.0 0.077 12.8 0.0 1.7 1 1 0 1 1 1 0 Haloacid dehalogenase-like hydrolase PvlArgDC PF01862.11 gi|154150719|ref|YP_001404337.1| - 2.4e-64 215.9 0.0 2.6e-64 215.7 0.0 1.0 1 0 0 1 1 1 1 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) Inhibitor_I42 PF09394.5 gi|154150720|ref|YP_001404338.1| - 1.3e-17 63.8 0.1 2e-17 63.2 0.1 1.3 1 0 0 1 1 1 1 Chagasin family peptidase inhibitor I42 SKG6 PF08693.5 gi|154150721|ref|YP_001404339.1| - 0.0029 16.8 2.8 0.0058 15.9 1.9 1.5 1 0 0 1 1 1 1 Transmembrane alpha-helix domain DUF4448 PF14610.1 gi|154150721|ref|YP_001404339.1| - 0.032 13.7 0.0 0.057 12.9 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4448) PEMT PF04191.8 gi|154150722|ref|YP_001404340.1| - 2.5 8.2 9.9 8.4 6.5 0.1 3.0 2 1 1 3 3 3 0 Phospholipid methyltransferase DIL PF01843.14 gi|154150725|ref|YP_001404343.1| - 0.011 15.5 0.3 0.016 15.0 0.2 1.2 1 0 0 1 1 1 0 DIL domain DUF1673 PF07895.6 gi|154150725|ref|YP_001404343.1| - 0.019 14.5 0.5 0.021 14.3 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1673) YvrJ PF12841.2 gi|154150725|ref|YP_001404343.1| - 0.021 14.1 1.2 0.52 9.6 0.1 3.0 3 0 0 3 3 3 0 YvrJ protein family DUF3429 PF11911.3 gi|154150725|ref|YP_001404343.1| - 0.07 13.1 1.1 0.085 12.8 0.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3429) DUF3989 PF13150.1 gi|154150725|ref|YP_001404343.1| - 0.11 12.0 1.1 1.3 8.5 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3989) MF_alpha PF04648.7 gi|154150726|ref|YP_001404344.1| - 0.13 12.4 0.5 0.8 10.0 0.1 2.6 2 0 0 2 2 2 0 Yeast mating factor alpha hormone IL13 PF03487.8 gi|154150729|ref|YP_001404347.1| - 0.046 13.4 0.6 0.071 12.8 0.4 1.4 1 0 0 1 1 1 0 Interleukin-13 HTH_24 PF13412.1 gi|154150732|ref|YP_001404350.1| - 9.4e-18 63.3 0.2 1.6e-08 33.7 0.0 2.3 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.5 gi|154150732|ref|YP_001404350.1| - 6.9e-15 54.3 0.0 1.1e-06 28.1 0.1 2.3 2 0 0 2 2 2 2 IclR helix-turn-helix domain MarR_2 PF12802.2 gi|154150732|ref|YP_001404350.1| - 1.3e-12 47.2 0.0 5.8e-08 32.2 0.0 2.3 2 0 0 2 2 2 2 MarR family HTH_20 PF12840.2 gi|154150732|ref|YP_001404350.1| - 1.5e-11 43.9 0.0 5e-05 23.0 0.0 2.2 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_5 PF01022.15 gi|154150732|ref|YP_001404350.1| - 6.4e-10 38.5 0.3 9.1e-05 22.0 0.0 2.4 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family MarR PF01047.17 gi|154150732|ref|YP_001404350.1| - 3.5e-08 33.0 0.0 6.9e-05 22.4 0.0 2.3 2 0 0 2 2 2 2 MarR family HTH_23 PF13384.1 gi|154150732|ref|YP_001404350.1| - 4.5e-06 26.1 0.0 0.021 14.4 0.0 2.4 2 0 0 2 2 2 2 Homeodomain-like domain Sigma70_r4_2 PF08281.7 gi|154150732|ref|YP_001404350.1| - 2.1e-05 23.9 0.0 0.073 12.5 0.0 2.4 2 0 0 2 2 2 2 Sigma-70, region 4 HTH_AsnC-type PF13404.1 gi|154150732|ref|YP_001404350.1| - 4.4e-05 22.9 0.0 0.0018 17.7 0.0 2.2 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain TrmB PF01978.14 gi|154150732|ref|YP_001404350.1| - 9.3e-05 22.0 0.0 0.11 12.1 0.0 2.2 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB HTH_40 PF14493.1 gi|154150732|ref|YP_001404350.1| - 0.00011 22.2 0.0 0.39 10.9 0.0 2.3 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_11 PF08279.7 gi|154150732|ref|YP_001404350.1| - 0.00014 21.4 0.1 0.004 16.7 0.0 2.3 2 0 0 2 2 2 1 HTH domain FaeA PF04703.7 gi|154150732|ref|YP_001404350.1| - 0.00044 20.3 0.0 0.0018 18.3 0.0 1.9 2 0 0 2 2 2 1 FaeA-like protein Rrf2 PF02082.15 gi|154150732|ref|YP_001404350.1| - 0.0011 19.0 0.0 0.33 11.1 0.0 2.3 2 0 0 2 2 2 1 Transcriptional regulator HTH_28 PF13518.1 gi|154150732|ref|YP_001404350.1| - 0.0012 18.7 0.0 0.29 11.1 0.0 2.4 2 0 0 2 2 2 1 Helix-turn-helix domain Sigma70_r4 PF04545.11 gi|154150732|ref|YP_001404350.1| - 0.0025 17.0 0.0 2.3 7.6 0.0 2.3 2 0 0 2 2 2 2 Sigma-70, region 4 HTH_38 PF13936.1 gi|154150732|ref|YP_001404350.1| - 0.0042 16.6 0.0 0.56 9.8 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain TFIIE_alpha PF02002.12 gi|154150732|ref|YP_001404350.1| - 0.0053 16.2 0.0 0.63 9.5 0.0 2.1 2 0 0 2 2 2 1 TFIIE alpha subunit Rio2_N PF09202.6 gi|154150732|ref|YP_001404350.1| - 0.0053 16.7 0.0 0.56 10.3 0.0 2.3 2 0 0 2 2 2 1 Rio2, N-terminal DUF997 PF06196.7 gi|154150732|ref|YP_001404350.1| - 0.0058 16.1 0.9 0.0094 15.4 0.5 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF997) HTH_29 PF13551.1 gi|154150732|ref|YP_001404350.1| - 0.013 15.6 0.0 0.56 10.3 0.0 2.2 2 0 0 2 2 2 0 Winged helix-turn helix HTH_10 PF04967.7 gi|154150732|ref|YP_001404350.1| - 0.016 14.7 0.1 6 6.5 0.0 2.5 2 1 1 3 3 3 0 HTH DNA binding domain GerE PF00196.14 gi|154150732|ref|YP_001404350.1| - 0.03 13.6 0.0 5.5 6.3 0.0 2.3 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family HTH_27 PF13463.1 gi|154150732|ref|YP_001404350.1| - 0.034 14.4 0.0 6.9 7.0 0.0 2.3 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_36 PF13730.1 gi|154150732|ref|YP_001404350.1| - 0.036 14.1 0.0 0.4 10.8 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.1 gi|154150732|ref|YP_001404350.1| - 0.053 12.7 0.0 1.6 7.9 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 Penicillinase_R PF03965.11 gi|154150732|ref|YP_001404350.1| - 0.09 12.8 0.0 4.3 7.4 0.0 2.1 2 0 0 2 2 2 0 Penicillinase repressor RNA_pol_Rpc34 PF05158.7 gi|154150732|ref|YP_001404350.1| - 0.097 11.8 0.0 0.18 10.9 0.0 1.4 1 1 0 1 1 1 0 RNA polymerase Rpc34 subunit CopK PF11525.3 gi|154150732|ref|YP_001404350.1| - 0.11 12.1 0.0 0.22 11.1 0.0 1.5 1 0 0 1 1 1 0 Copper resistance protein K Sulfolobus_pRN PF05584.6 gi|154150732|ref|YP_001404350.1| - 0.12 12.3 0.0 8.7 6.3 0.0 2.2 2 0 0 2 2 2 0 Sulfolobus plasmid regulatory protein HTH_Crp_2 PF13545.1 gi|154150732|ref|YP_001404350.1| - 0.14 11.9 0.0 8.9 6.1 0.0 2.3 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain DUF1049 PF06305.6 gi|154150732|ref|YP_001404350.1| - 9.2 5.8 6.2 2.8 7.4 0.8 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1049) zf-ribbon_3 PF13248.1 gi|154150733|ref|YP_001404351.1| - 1.6e-09 36.6 1.3 2.9e-09 35.8 0.9 1.5 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_2 PF13240.1 gi|154150733|ref|YP_001404351.1| - 3.2e-08 32.7 2.9 4.9e-08 32.2 2.0 1.3 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.2 gi|154150733|ref|YP_001404351.1| - 2.8e-06 27.0 0.8 5e-06 26.2 0.6 1.4 1 0 0 1 1 1 1 Double zinc ribbon TM2 PF05154.11 gi|154150733|ref|YP_001404351.1| - 5e-05 23.4 1.0 5e-05 23.4 0.7 2.1 2 0 0 2 2 2 1 TM2 domain Nudix_N_2 PF14803.1 gi|154150733|ref|YP_001404351.1| - 6.3e-05 22.5 1.6 0.22 11.2 0.1 2.3 2 0 0 2 2 2 2 Nudix N-terminal UPF0547 PF10571.4 gi|154150733|ref|YP_001404351.1| - 0.00021 20.8 1.9 0.00044 19.8 1.3 1.5 1 0 0 1 1 1 1 Uncharacterised protein family UPF0547 DUF4064 PF13273.1 gi|154150733|ref|YP_001404351.1| - 0.012 15.6 8.9 0.02 14.9 6.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4064) Prok-RING_1 PF14446.1 gi|154150733|ref|YP_001404351.1| - 0.019 14.7 0.3 0.028 14.1 0.2 1.2 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 NOB1_Zn_bind PF08772.6 gi|154150733|ref|YP_001404351.1| - 0.023 14.5 0.9 0.054 13.3 0.6 1.5 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like DUF4013 PF13197.1 gi|154150733|ref|YP_001404351.1| - 0.036 13.4 11.9 0.049 12.9 8.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4013) zf-NADH-PPase PF09297.6 gi|154150733|ref|YP_001404351.1| - 0.054 13.0 3.5 0.42 10.1 2.4 2.1 1 1 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain C1_1 PF00130.17 gi|154150733|ref|YP_001404351.1| - 0.074 12.7 0.4 0.13 12.0 0.3 1.3 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) GFA PF04828.9 gi|154150733|ref|YP_001404351.1| - 0.079 12.9 0.9 1.9 8.5 0.6 2.2 1 1 0 1 1 1 0 Glutathione-dependent formaldehyde-activating enzyme SP_C-Propep PF08999.5 gi|154150733|ref|YP_001404351.1| - 0.079 12.4 2.4 0.091 12.2 1.1 1.5 1 1 0 1 1 1 0 Surfactant protein C, N terminal propeptide zinc-ribbons_6 PF07191.7 gi|154150733|ref|YP_001404351.1| - 0.089 12.5 1.1 0.13 12.0 0.8 1.2 1 0 0 1 1 1 0 zinc-ribbons DUF35_N PF12172.3 gi|154150733|ref|YP_001404351.1| - 0.11 12.3 0.1 0.22 11.4 0.1 1.4 1 0 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) OrfB_Zn_ribbon PF07282.6 gi|154150733|ref|YP_001404351.1| - 0.12 12.0 0.4 0.21 11.2 0.3 1.4 1 0 0 1 1 1 0 Putative transposase DNA-binding domain TF_Zn_Ribbon PF08271.7 gi|154150733|ref|YP_001404351.1| - 0.16 11.3 2.2 0.36 10.1 1.5 1.6 1 1 0 1 1 1 0 TFIIB zinc-binding NinF PF05810.7 gi|154150733|ref|YP_001404351.1| - 0.17 11.7 0.3 0.28 10.9 0.2 1.3 1 0 0 1 1 1 0 NinF protein Chordopox_A13L PF05961.6 gi|154150733|ref|YP_001404351.1| - 0.19 11.6 7.4 0.93 9.4 1.1 2.3 2 0 0 2 2 2 0 Chordopoxvirus A13L protein zf-IS66 PF13005.2 gi|154150733|ref|YP_001404351.1| - 0.29 11.1 2.1 7 6.7 0.2 2.3 1 1 1 2 2 2 0 zinc-finger binding domain of transposase IS66 zf-C4_Topoisom PF01396.14 gi|154150733|ref|YP_001404351.1| - 0.3 10.6 3.0 1.6 8.3 0.1 2.3 1 1 1 2 2 2 0 Topoisomerase DNA binding C4 zinc finger DUF4234 PF14018.1 gi|154150733|ref|YP_001404351.1| - 0.54 10.0 7.4 2 8.2 0.1 2.4 1 1 2 3 3 3 0 Domain of unknown function (DUF4234) YhfH PF14149.1 gi|154150733|ref|YP_001404351.1| - 0.68 9.7 3.8 19 5.1 2.9 2.2 1 1 1 2 2 2 0 YhfH-like protein stn_TNFRSF12A PF12191.3 gi|154150733|ref|YP_001404351.1| - 0.7 9.9 3.2 0.47 10.4 0.1 2.2 2 0 0 2 2 2 0 Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain RNA_POL_M_15KD PF02150.11 gi|154150733|ref|YP_001404351.1| - 1.5 8.5 4.5 15 5.4 3.1 2.1 1 1 1 2 2 2 0 RNA polymerases M/15 Kd subunit DUF2207 PF09972.4 gi|154150733|ref|YP_001404351.1| - 3.1 6.2 4.3 4 5.9 3.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF983 PF06170.7 gi|154150733|ref|YP_001404351.1| - 6.5 6.9 14.2 0.96 9.5 1.0 3.8 2 1 1 3 3 3 0 Protein of unknown function (DUF983) CbiA PF01656.18 gi|154150734|ref|YP_001404352.1| - 2.1e-25 89.2 0.0 2.5e-25 89.0 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ArsA_ATPase PF02374.10 gi|154150734|ref|YP_001404352.1| - 1.9e-05 23.8 0.0 2.9e-05 23.2 0.0 1.4 1 0 0 1 1 1 1 Anion-transporting ATPase AAA_16 PF13191.1 gi|154150734|ref|YP_001404352.1| - 0.00069 19.6 0.0 0.0034 17.3 0.0 2.1 2 1 0 2 2 2 1 AAA ATPase domain ArgK PF03308.11 gi|154150734|ref|YP_001404352.1| - 0.0011 17.8 0.0 0.0016 17.2 0.0 1.2 1 0 0 1 1 1 1 ArgK protein YhjQ PF06564.7 gi|154150734|ref|YP_001404352.1| - 0.0012 18.2 0.0 0.014 14.7 0.0 2.4 1 1 0 1 1 1 1 YhjQ protein Fer4_NifH PF00142.13 gi|154150734|ref|YP_001404352.1| - 0.0025 17.0 0.0 0.078 12.1 0.0 2.1 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family MipZ PF09140.6 gi|154150734|ref|YP_001404352.1| - 0.0033 16.5 0.0 0.78 8.7 0.0 2.2 2 0 0 2 2 2 2 ATPase MipZ AAA_31 PF13614.1 gi|154150734|ref|YP_001404352.1| - 0.0042 17.0 0.0 0.048 13.5 0.0 2.1 1 1 0 1 1 1 1 AAA domain Zeta_toxin PF06414.7 gi|154150734|ref|YP_001404352.1| - 0.012 14.7 0.0 0.024 13.7 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin AAA_17 PF13207.1 gi|154150734|ref|YP_001404352.1| - 0.03 15.1 0.4 0.085 13.6 0.3 1.9 1 1 0 1 1 1 0 AAA domain AAA_24 PF13479.1 gi|154150734|ref|YP_001404352.1| - 0.051 13.1 0.0 0.087 12.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.1 gi|154150734|ref|YP_001404352.1| - 0.052 13.8 0.0 0.085 13.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain KAP_NTPase PF07693.9 gi|154150734|ref|YP_001404352.1| - 0.077 11.9 0.0 0.077 11.9 0.0 1.2 1 0 0 1 1 1 0 KAP family P-loop domain NB-ARC PF00931.17 gi|154150734|ref|YP_001404352.1| - 0.08 11.7 0.0 0.13 11.1 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain MobB PF03205.9 gi|154150734|ref|YP_001404352.1| - 0.086 12.5 0.0 0.23 11.1 0.0 1.7 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AhpC-TSA_2 PF13911.1 gi|154150734|ref|YP_001404352.1| - 0.096 12.6 0.0 0.11 12.4 0.0 1.3 1 1 0 1 1 1 0 AhpC/TSA antioxidant enzyme APS_kinase PF01583.15 gi|154150734|ref|YP_001404352.1| - 0.099 12.3 0.0 0.18 11.4 0.0 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase Thymidylate_kin PF02223.12 gi|154150734|ref|YP_001404352.1| - 0.11 11.8 0.0 0.4 10.0 0.0 1.9 2 0 0 2 2 2 0 Thymidylate kinase DUF87 PF01935.12 gi|154150734|ref|YP_001404352.1| - 0.16 11.7 0.0 0.26 11.0 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function DUF87 AAA_22 PF13401.1 gi|154150734|ref|YP_001404352.1| - 0.16 12.0 0.1 0.93 9.6 0.1 2.2 1 1 0 1 1 1 0 AAA domain DUF4445 PF14574.1 gi|154150736|ref|YP_001404354.1| - 2.9e-141 470.4 4.2 3.5e-141 470.1 2.9 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4445) Fer2 PF00111.22 gi|154150736|ref|YP_001404354.1| - 1e-11 44.3 0.3 3.4e-11 42.7 0.2 1.9 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain BcrAD_BadFG PF01869.15 gi|154150736|ref|YP_001404354.1| - 8.9e-05 21.9 0.2 0.00061 19.1 0.1 2.0 2 0 0 2 2 2 1 BadF/BadG/BcrA/BcrD ATPase family Fer2_4 PF13510.1 gi|154150736|ref|YP_001404354.1| - 0.004 16.9 0.1 0.011 15.4 0.1 1.8 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain DHODB_Fe-S_bind PF10418.4 gi|154150736|ref|YP_001404354.1| - 0.22 11.0 6.4 0.52 9.8 1.0 2.5 2 0 0 2 2 2 0 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CdhD PF03599.11 gi|154150737|ref|YP_001404355.1| - 1.4e-93 313.4 0.0 1.7e-93 313.1 0.0 1.0 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase delta subunit FeS PF04060.8 gi|154150737|ref|YP_001404355.1| - 4.7e-12 45.2 2.7 4.7e-12 45.2 1.9 2.0 2 0 0 2 2 2 1 Putative Fe-S cluster YhfH PF14149.1 gi|154150737|ref|YP_001404355.1| - 0.0033 17.1 0.1 0.0074 16.0 0.1 1.6 1 0 0 1 1 1 1 YhfH-like protein CdhD PF03599.11 gi|154150738|ref|YP_001404356.1| - 8.1e-38 129.9 0.0 9.5e-38 129.6 0.0 1.0 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase delta subunit CdhC PF03598.10 gi|154150739|ref|YP_001404357.1| - 1.4e-191 636.3 0.0 1.7e-191 636.1 0.0 1.1 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase complex beta subunit PEGA PF08308.6 gi|154150740|ref|YP_001404358.1| - 2.5e-18 65.6 5.2 1.4e-17 63.2 0.2 3.0 3 0 0 3 3 3 1 PEGA domain FlgD_ig PF13860.1 gi|154150740|ref|YP_001404358.1| - 8.7e-08 31.8 2.0 0.00048 19.8 0.1 3.3 2 1 0 2 2 2 2 FlgD Ig-like domain CarboxypepD_reg PF13620.1 gi|154150740|ref|YP_001404358.1| - 0.0002 21.3 12.6 0.023 14.7 0.0 4.9 3 2 1 4 4 4 2 Carboxypeptidase regulatory-like domain Y_Y_Y PF07495.8 gi|154150740|ref|YP_001404358.1| - 0.0095 15.6 0.8 0.15 11.8 0.3 2.5 2 1 0 2 2 2 1 Y_Y_Y domain CHU_C PF13585.1 gi|154150740|ref|YP_001404358.1| - 0.01 15.6 0.3 0.069 13.0 0.0 2.1 2 0 0 2 2 2 0 C-terminal domain of CHU protein family DUF2012 PF09430.5 gi|154150740|ref|YP_001404358.1| - 0.03 14.1 0.0 14 5.5 0.0 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF2012) Lactamase_B PF00753.22 gi|154150741|ref|YP_001404359.1| - 1e-12 48.1 0.3 1.1e-11 44.7 0.1 2.6 2 1 0 2 2 2 1 Metallo-beta-lactamase superfamily ACT PF01842.20 gi|154150741|ref|YP_001404359.1| - 3.1e-05 23.3 0.0 0.0031 16.9 0.0 2.6 2 0 0 2 2 2 2 ACT domain Thr_dehydrat_C PF00585.13 gi|154150741|ref|YP_001404359.1| - 0.0013 18.2 0.0 0.28 10.7 0.0 2.4 1 1 1 2 2 2 2 C-terminal regulatory domain of Threonine dehydratase SIS PF01380.17 gi|154150742|ref|YP_001404360.1| - 1.7e-15 56.7 0.1 2.7e-15 56.1 0.1 1.3 1 0 0 1 1 1 1 SIS domain SIS_2 PF13580.1 gi|154150742|ref|YP_001404360.1| - 7.6e-08 32.1 2.1 0.0001 22.0 0.0 2.7 2 1 1 3 3 3 2 SIS domain Aminotran_1_2 PF00155.16 gi|154150743|ref|YP_001404361.1| - 4.2e-63 213.4 0.0 4.8e-63 213.3 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.14 gi|154150743|ref|YP_001404361.1| - 6e-05 21.9 0.0 8.4e-05 21.4 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.12 gi|154150743|ref|YP_001404361.1| - 7.3e-05 21.9 0.2 0.0001 21.4 0.2 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.16 gi|154150743|ref|YP_001404361.1| - 0.0002 20.6 0.2 0.00034 19.8 0.1 1.4 1 1 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.15 gi|154150743|ref|YP_001404361.1| - 0.0033 15.7 0.0 0.0048 15.2 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme OKR_DC_1 PF01276.15 gi|154150743|ref|YP_001404361.1| - 0.046 12.2 0.0 0.074 11.5 0.0 1.3 1 0 0 1 1 1 0 Orn/Lys/Arg decarboxylase, major domain Peptidase_M42 PF05343.9 gi|154150744|ref|YP_001404362.1| - 3.1e-106 354.3 1.6 3.6e-106 354.1 1.1 1.0 1 0 0 1 1 1 1 M42 glutamyl aminopeptidase Peptidase_M20 PF01546.23 gi|154150744|ref|YP_001404362.1| - 3.1e-12 46.3 0.0 5.3e-12 45.6 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M28 PF04389.12 gi|154150744|ref|YP_001404362.1| - 2.6e-05 24.0 0.0 0.00018 21.2 0.0 1.9 2 0 0 2 2 2 1 Peptidase family M28 Peptidase_M18 PF02127.10 gi|154150744|ref|YP_001404362.1| - 0.0031 16.1 0.1 0.0063 15.0 0.0 1.5 1 1 0 1 1 1 1 Aminopeptidase I zinc metalloprotease (M18) ILVD_EDD PF00920.16 gi|154150746|ref|YP_001404364.1| - 8.8e-214 710.7 5.9 1e-213 710.5 4.1 1.0 1 0 0 1 1 1 1 Dehydratase family DUF4013 PF13197.1 gi|154150747|ref|YP_001404365.1| - 1.4e-37 128.6 30.8 1.4e-37 128.6 21.3 2.0 1 1 1 2 2 2 1 Protein of unknown function (DUF4013) Poxvirus_B22R_C PF13168.1 gi|154150747|ref|YP_001404365.1| - 0.57 9.4 3.1 1.1 8.4 2.2 1.5 1 0 0 1 1 1 0 Poxvirus B22R protein C-terminal DUF1673 PF07895.6 gi|154150747|ref|YP_001404365.1| - 9.6 5.6 13.8 0.25 10.8 1.1 2.7 1 1 0 2 2 2 0 Protein of unknown function (DUF1673) AICARFT_IMPCHas PF01808.13 gi|154150748|ref|YP_001404366.1| - 3.3e-102 341.7 0.4 4.1e-102 341.4 0.3 1.1 1 0 0 1 1 1 1 AICARFT/IMPCHase bienzyme MGS PF02142.17 gi|154150748|ref|YP_001404366.1| - 1.3e-20 73.0 0.0 2.6e-20 72.1 0.0 1.5 1 0 0 1 1 1 1 MGS-like domain GrpE PF01025.14 gi|154150749|ref|YP_001404367.1| - 5.2e-45 152.9 0.0 6e-45 152.7 0.0 1.0 1 0 0 1 1 1 1 GrpE Nup54 PF13874.1 gi|154150749|ref|YP_001404367.1| - 0.13 11.8 0.3 0.3 10.7 0.2 1.5 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 HSP70 PF00012.15 gi|154150750|ref|YP_001404368.1| - 9.2e-240 796.6 15.1 7.8e-237 786.9 10.5 2.0 1 1 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.8 gi|154150750|ref|YP_001404368.1| - 1.5e-19 69.8 1.3 4.5e-19 68.2 0.9 1.8 1 1 0 1 1 1 1 MreB/Mbl protein FGGY_C PF02782.11 gi|154150750|ref|YP_001404368.1| - 0.0062 16.1 0.2 0.025 14.1 0.0 2.0 2 0 0 2 2 2 1 FGGY family of carbohydrate kinases, C-terminal domain HBS1_N PF08938.5 gi|154150750|ref|YP_001404368.1| - 0.0069 16.4 1.3 0.035 14.2 0.2 2.5 1 1 1 2 2 2 1 HBS1 N-terminus FtsA PF14450.1 gi|154150750|ref|YP_001404368.1| - 0.1 12.4 6.7 0.51 10.1 0.1 4.3 3 2 0 3 3 3 0 Cell division protein FtsA CTDII PF01556.13 gi|154150751|ref|YP_001404369.1| - 8.9e-29 99.2 1.0 1.3e-19 69.8 0.2 3.3 3 0 0 3 3 3 3 DnaJ C terminal domain DnaJ PF00226.26 gi|154150751|ref|YP_001404369.1| - 3.3e-28 97.2 1.0 1e-27 95.6 1.0 1.6 2 0 0 2 2 2 1 DnaJ domain DnaJ_CXXCXGXG PF00684.14 gi|154150751|ref|YP_001404369.1| - 5e-13 48.8 16.8 9.7e-13 47.9 11.6 1.5 1 0 0 1 1 1 1 DnaJ central domain zf-FPG_IleRS PF06827.9 gi|154150751|ref|YP_001404369.1| - 0.031 13.8 1.7 0.085 12.5 1.2 1.8 1 0 0 1 1 1 0 Zinc finger found in FPG and IleRS Lar_restr_allev PF14354.1 gi|154150751|ref|YP_001404369.1| - 0.24 11.7 8.6 0.5 10.6 1.3 2.9 1 1 1 2 2 2 0 Restriction alleviation protein Lar FdhE PF04216.7 gi|154150751|ref|YP_001404369.1| - 0.48 10.1 10.8 5 6.7 4.4 2.6 1 1 1 2 2 2 0 Protein involved in formate dehydrogenase formation HypA PF01155.14 gi|154150751|ref|YP_001404369.1| - 0.78 9.4 8.8 0.19 11.4 0.9 2.2 1 1 1 2 2 2 0 Hydrogenase expression/synthesis hypA family DZR PF12773.2 gi|154150751|ref|YP_001404369.1| - 0.89 9.4 12.6 0.091 12.5 2.4 2.2 1 1 2 3 3 3 0 Double zinc ribbon Prim_Zn_Ribbon PF08273.7 gi|154150751|ref|YP_001404369.1| - 1.5 8.9 19.7 12 6.1 0.1 4.1 3 1 0 3 3 3 0 Zinc-binding domain of primase-helicase zf-nanos PF05741.8 gi|154150751|ref|YP_001404369.1| - 1.9 8.5 6.3 6 6.9 0.9 2.9 1 1 2 3 3 3 0 Nanos RNA binding domain OrfB_Zn_ribbon PF07282.6 gi|154150751|ref|YP_001404369.1| - 8.5 6.1 10.9 0.19 11.4 1.8 2.3 2 0 0 2 2 2 0 Putative transposase DNA-binding domain STT3 PF02516.9 gi|154150752|ref|YP_001404370.1| - 4.1e-17 62.3 51.5 1.6e-14 53.7 31.5 2.6 2 1 0 2 2 2 2 Oligosaccharyl transferase STT3 subunit UPF0020 PF01170.13 gi|154150753|ref|YP_001404371.1| - 8.1e-31 106.9 0.0 2.6e-30 105.3 0.0 1.8 2 0 0 2 2 2 1 Putative RNA methylase family UPF0020 Methyltransf_26 PF13659.1 gi|154150753|ref|YP_001404371.1| - 1.5e-12 47.5 0.0 3.4e-12 46.4 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain N6_N4_Mtase PF01555.13 gi|154150753|ref|YP_001404371.1| - 4.1e-07 29.7 0.0 1.3e-05 24.7 0.0 2.1 2 0 0 2 2 2 1 DNA methylase Methyltransf_11 PF08241.7 gi|154150753|ref|YP_001404371.1| - 1.2e-06 28.8 0.0 4e-06 27.2 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|154150753|ref|YP_001404371.1| - 2e-05 24.2 0.0 3.2e-05 23.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|154150753|ref|YP_001404371.1| - 0.01 16.1 0.0 0.02 15.2 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain N6_Mtase PF02384.11 gi|154150753|ref|YP_001404371.1| - 0.02 13.9 0.0 0.62 9.0 0.0 2.1 1 1 0 2 2 2 0 N-6 DNA Methylase Methyltransf_23 PF13489.1 gi|154150753|ref|YP_001404371.1| - 0.028 14.1 0.0 0.13 11.9 0.0 1.9 1 1 0 1 1 1 0 Methyltransferase domain Ubie_methyltran PF01209.13 gi|154150753|ref|YP_001404371.1| - 0.044 12.8 0.0 0.082 12.0 0.0 1.4 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Cons_hypoth95 PF03602.10 gi|154150753|ref|YP_001404371.1| - 0.11 11.9 0.1 1.4 8.2 0.1 2.2 1 1 0 1 1 1 0 Conserved hypothetical protein 95 TPR_11 PF13414.1 gi|154150754|ref|YP_001404372.1| - 1.1e-23 82.6 11.9 2.3e-09 36.7 0.8 4.2 1 1 2 4 4 4 4 TPR repeat TPR_17 PF13431.1 gi|154150754|ref|YP_001404372.1| - 4e-18 64.0 9.9 2.7e-05 24.0 0.0 5.4 5 0 0 5 5 5 4 Tetratricopeptide repeat TPR_2 PF07719.12 gi|154150754|ref|YP_001404372.1| - 9.3e-17 59.5 4.4 2.2e-07 30.2 0.2 5.1 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_14 PF13428.1 gi|154150754|ref|YP_001404372.1| - 6.1e-16 57.4 5.3 9.5e-07 28.9 1.0 4.6 3 1 1 4 4 4 3 Tetratricopeptide repeat TPR_16 PF13432.1 gi|154150754|ref|YP_001404372.1| - 1.5e-15 57.4 8.6 1.4e-08 35.2 1.0 4.5 2 2 2 4 4 4 3 Tetratricopeptide repeat TPR_1 PF00515.23 gi|154150754|ref|YP_001404372.1| - 8e-15 53.7 13.0 1.2e-06 27.8 0.2 6.0 6 1 1 7 7 7 3 Tetratricopeptide repeat TPR_19 PF14559.1 gi|154150754|ref|YP_001404372.1| - 4.6e-12 46.1 2.6 3e-05 24.2 0.6 3.1 2 2 0 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.1 gi|154150754|ref|YP_001404372.1| - 1.3e-10 41.0 3.9 1.1e-05 25.2 0.0 2.7 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_9 PF13371.1 gi|154150754|ref|YP_001404372.1| - 6.1e-08 32.4 3.8 0.077 12.8 0.1 3.6 4 0 0 4 4 3 3 Tetratricopeptide repeat TPR_8 PF13181.1 gi|154150754|ref|YP_001404372.1| - 6.5e-06 25.5 6.0 0.076 12.8 0.0 5.0 3 1 0 4 4 3 1 Tetratricopeptide repeat TPR_6 PF13174.1 gi|154150754|ref|YP_001404372.1| - 6.5e-06 26.2 9.2 0.016 15.6 0.2 4.2 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_7 PF13176.1 gi|154150754|ref|YP_001404372.1| - 5.3e-05 22.6 1.8 0.0088 15.7 0.1 3.1 2 0 0 2 2 2 1 Tetratricopeptide repeat Apc3 PF12895.2 gi|154150754|ref|YP_001404372.1| - 5.5e-05 23.2 1.4 0.21 11.7 0.0 3.4 1 1 1 3 3 3 1 Anaphase-promoting complex, cyclosome, subunit 3 PPTA PF01239.17 gi|154150754|ref|YP_001404372.1| - 0.0061 15.8 0.9 6.3 6.3 0.1 3.3 3 0 0 3 3 3 1 Protein prenyltransferase alpha subunit repeat FAT PF02259.18 gi|154150754|ref|YP_001404372.1| - 0.022 13.7 2.2 1 8.2 0.1 2.1 1 1 0 2 2 2 0 FAT domain TPR_20 PF14561.1 gi|154150754|ref|YP_001404372.1| - 0.026 14.6 0.3 30 4.8 0.2 3.2 2 1 1 3 3 3 0 Tetratricopeptide repeat MIT PF04212.13 gi|154150754|ref|YP_001404372.1| - 0.077 12.8 2.2 0.33 10.8 0.2 2.5 2 0 0 2 2 2 0 MIT (microtubule interacting and transport) domain TPR_3 PF07720.7 gi|154150754|ref|YP_001404372.1| - 0.1 12.3 0.1 0.1 12.3 0.1 2.6 3 1 0 3 3 2 0 Tetratricopeptide repeat DUF4386 PF14329.1 gi|154150754|ref|YP_001404372.1| - 0.19 11.2 2.8 0.87 9.0 0.2 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4386) TOM20_plant PF06552.7 gi|154150754|ref|YP_001404372.1| - 0.2 11.2 1.4 8.5 5.9 0.2 2.4 1 1 0 2 2 2 0 Plant specific mitochondrial import receptor subunit TOM20 2_5_RNA_ligase2 PF13563.1 gi|154150755|ref|YP_001404373.1| - 9.3e-10 38.4 0.0 1.6e-09 37.6 0.0 1.3 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily Metallophos PF00149.23 gi|154150755|ref|YP_001404373.1| - 1.2e-05 24.7 0.5 2.2e-05 23.9 0.3 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.2 gi|154150755|ref|YP_001404373.1| - 0.0003 20.6 0.6 0.00092 19.0 0.4 1.7 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Pyridox_ox_2 PF12900.2 gi|154150756|ref|YP_001404374.1| - 1.5e-22 79.9 0.0 1.8e-22 79.7 0.0 1.1 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Pyridox_oxidase PF01243.15 gi|154150756|ref|YP_001404374.1| - 0.0005 20.0 0.0 0.00073 19.5 0.0 1.2 1 0 0 1 1 1 1 Pyridoxamine 5'-phosphate oxidase Thioredox_DsbH PF03190.10 gi|154150757|ref|YP_001404375.1| - 1.4e-75 252.5 0.0 2.2e-75 251.8 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF255 Thioredoxin_7 PF13899.1 gi|154150757|ref|YP_001404375.1| - 4.1e-11 42.7 0.0 7.8e-11 41.8 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin-like GlcNAc_2-epim PF07221.6 gi|154150757|ref|YP_001404375.1| - 3.1e-05 23.1 0.8 0.018 14.0 0.1 2.3 2 0 0 2 2 2 2 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) Glyco_hydro_88 PF07470.8 gi|154150757|ref|YP_001404375.1| - 0.00098 18.2 0.0 1.3 8.0 0.0 2.6 2 0 0 2 2 2 2 Glycosyl Hydrolase Family 88 Thioredoxin_2 PF13098.1 gi|154150757|ref|YP_001404375.1| - 0.023 14.9 0.0 0.047 13.8 0.0 1.5 1 0 0 1 1 1 0 Thioredoxin-like domain Glyco_hydro_76 PF03663.9 gi|154150757|ref|YP_001404375.1| - 0.059 12.7 0.5 3.1 7.0 0.0 3.0 2 1 0 3 3 3 0 Glycosyl hydrolase family 76 DUF3267 PF11667.3 gi|154150758|ref|YP_001404376.1| - 0.0001 22.4 0.6 0.0001 22.4 0.4 2.9 1 1 2 3 3 3 1 Protein of unknown function (DUF3267) Peptidase_M50B PF13398.1 gi|154150758|ref|YP_001404376.1| - 0.0015 17.9 13.6 0.0015 17.9 9.4 2.6 1 1 1 2 2 2 1 Peptidase M50B-like Peptidase_M50 PF02163.17 gi|154150758|ref|YP_001404376.1| - 0.12 11.2 0.1 0.12 11.2 0.1 2.3 2 0 0 2 2 2 0 Peptidase family M50 DUF4401 PF14351.1 gi|154150758|ref|YP_001404376.1| - 0.29 10.0 25.8 0.77 8.6 17.9 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4401) MutS_V PF00488.16 gi|154150759|ref|YP_001404377.1| - 5.8e-93 310.6 0.0 1.1e-92 309.6 0.0 1.5 1 0 0 1 1 1 1 MutS domain V MutS_III PF05192.13 gi|154150759|ref|YP_001404377.1| - 1.3e-50 171.9 0.1 2.1e-50 171.3 0.1 1.3 1 0 0 1 1 1 1 MutS domain III MutS_I PF01624.15 gi|154150759|ref|YP_001404377.1| - 3.4e-41 139.8 0.0 1.4e-40 137.8 0.0 2.0 2 0 0 2 2 2 1 MutS domain I MutS_IV PF05190.13 gi|154150759|ref|YP_001404377.1| - 5.7e-25 87.3 0.0 1.2e-24 86.3 0.0 1.6 1 0 0 1 1 1 1 MutS family domain IV MutS_II PF05188.12 gi|154150759|ref|YP_001404377.1| - 6e-24 84.6 0.0 1.2e-23 83.6 0.0 1.5 1 0 0 1 1 1 1 MutS domain II AAA_14 PF13173.1 gi|154150759|ref|YP_001404377.1| - 0.034 14.0 0.1 0.17 11.8 0.0 2.2 2 1 0 2 2 2 0 AAA domain AAA_29 PF13555.1 gi|154150759|ref|YP_001404377.1| - 0.057 12.9 0.1 0.26 10.8 0.0 2.1 2 0 0 2 2 2 0 P-loop containing region of AAA domain AAA_23 PF13476.1 gi|154150759|ref|YP_001404377.1| - 0.17 12.2 0.0 0.36 11.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain DNA_mis_repair PF01119.14 gi|154150760|ref|YP_001404378.1| - 6.4e-36 122.4 0.0 1e-35 121.7 0.0 1.3 1 0 0 1 1 1 1 DNA mismatch repair protein, C-terminal domain MutL_C PF08676.6 gi|154150760|ref|YP_001404378.1| - 1.3e-35 122.0 0.0 2e-35 121.4 0.0 1.3 1 0 0 1 1 1 1 MutL C terminal dimerisation domain HATPase_c_3 PF13589.1 gi|154150760|ref|YP_001404378.1| - 1.7e-12 47.1 0.0 2.8e-12 46.4 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.21 gi|154150760|ref|YP_001404378.1| - 1.5e-10 40.7 0.1 3e-10 39.7 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CorA PF01544.13 gi|154150761|ref|YP_001404379.1| - 2.5e-46 158.0 0.0 3.6e-46 157.5 0.0 1.1 1 0 0 1 1 1 1 CorA-like Mg2+ transporter protein Ion_trans PF00520.26 gi|154150761|ref|YP_001404379.1| - 4.3e-09 35.9 3.0 2.3e-08 33.5 0.3 2.8 3 0 0 3 3 3 1 Ion transport protein E1-E2_ATPase PF00122.15 gi|154150761|ref|YP_001404379.1| - 0.55 9.2 2.5 0.32 10.0 0.1 1.7 2 0 0 2 2 2 0 E1-E2 ATPase HhH-GPD PF00730.20 gi|154150762|ref|YP_001404380.1| - 1.9e-12 47.3 0.0 3.4e-12 46.6 0.0 1.3 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH_5 PF14520.1 gi|154150762|ref|YP_001404380.1| - 0.00023 21.2 0.0 1 9.6 0.0 2.6 2 1 0 2 2 2 2 Helix-hairpin-helix domain HHH PF00633.18 gi|154150762|ref|YP_001404380.1| - 0.043 13.5 0.0 0.092 12.4 0.0 1.5 1 0 0 1 1 1 0 Helix-hairpin-helix motif SdpI PF13630.1 gi|154150764|ref|YP_001404382.1| - 0.3 10.8 5.2 0.44 10.2 3.6 1.2 1 0 0 1 1 1 0 SdpI/YhfL protein family DUF3899 PF13038.1 gi|154150764|ref|YP_001404382.1| - 1.1 9.4 4.2 9.8 6.4 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3899) NfeD PF01957.13 gi|154150764|ref|YP_001404382.1| - 2.4 8.2 5.3 12 6.0 3.6 1.9 1 1 0 1 1 1 0 NfeD-like C-terminal, partner-binding YebO PF13974.1 gi|154150765|ref|YP_001404383.1| - 0.077 12.7 0.3 0.077 12.7 0.2 1.7 2 0 0 2 2 2 0 YebO-like protein Caveolin PF01146.12 gi|154150765|ref|YP_001404383.1| - 0.12 11.9 0.3 0.18 11.3 0.2 1.2 1 0 0 1 1 1 0 Caveolin Chloroplast_duf PF14476.1 gi|154150765|ref|YP_001404383.1| - 0.15 10.8 0.3 0.18 10.5 0.2 1.0 1 0 0 1 1 1 0 Petal formation-expressed Ldr_toxin PF13940.1 gi|154150765|ref|YP_001404383.1| - 0.8 9.5 4.7 0.44 10.3 0.4 2.2 2 0 0 2 2 2 0 Toxin Ldr, type I toxin-antitoxin system TP_methylase PF00590.15 gi|154150766|ref|YP_001404384.1| - 9.1e-32 110.4 0.4 2.7e-31 108.9 0.3 1.7 1 1 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases CbiD PF01888.12 gi|154150767|ref|YP_001404385.1| - 3.1e-40 137.7 0.3 4e-40 137.4 0.2 1.1 1 0 0 1 1 1 1 CbiD CbiC PF02570.10 gi|154150768|ref|YP_001404386.1| - 2e-59 200.3 5.1 2.4e-59 200.1 3.5 1.0 1 0 0 1 1 1 1 Precorrin-8X methylmutase TP_methylase PF00590.15 gi|154150769|ref|YP_001404387.1| - 6.5e-36 124.0 0.9 7.5e-36 123.8 0.6 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases CbiG_C PF01890.11 gi|154150770|ref|YP_001404388.1| - 5.8e-28 97.5 0.6 9.3e-28 96.9 0.4 1.3 1 0 0 1 1 1 1 Cobalamin synthesis G C-terminus CbiG_N PF11760.3 gi|154150770|ref|YP_001404388.1| - 6.5e-28 96.2 0.0 1.5e-27 95.1 0.0 1.6 1 0 0 1 1 1 1 Cobalamin synthesis G N-terminal TP_methylase PF00590.15 gi|154150771|ref|YP_001404389.1| - 1e-45 156.0 1.0 1.2e-45 155.8 0.7 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Radical_SAM PF04055.16 gi|154150771|ref|YP_001404389.1| - 0.0083 16.3 0.0 0.014 15.5 0.0 1.4 2 0 0 2 2 2 1 Radical SAM superfamily TP_methylase PF00590.15 gi|154150772|ref|YP_001404390.1| - 1.1e-33 116.7 0.1 1.8e-33 116.0 0.0 1.4 1 1 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Methyltransf_31 PF13847.1 gi|154150773|ref|YP_001404391.1| - 2.3e-16 59.7 0.0 2.6e-16 59.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|154150773|ref|YP_001404391.1| - 4.8e-16 59.3 0.1 5.7e-16 59.0 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|154150773|ref|YP_001404391.1| - 6.1e-11 42.5 0.1 9.4e-11 41.9 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|154150773|ref|YP_001404391.1| - 3.2e-10 40.0 0.5 4e-10 39.7 0.4 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|154150773|ref|YP_001404391.1| - 6.8e-09 35.3 0.1 1.1e-08 34.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.7 gi|154150773|ref|YP_001404391.1| - 6.3e-08 33.0 0.0 8.8e-08 32.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.8 gi|154150773|ref|YP_001404391.1| - 7.3e-08 31.8 0.2 1e-07 31.3 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Met_10 PF02475.11 gi|154150773|ref|YP_001404391.1| - 4.9e-07 29.5 0.0 6.6e-07 29.1 0.0 1.1 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_4 PF02390.12 gi|154150773|ref|YP_001404391.1| - 5.9e-07 28.7 0.0 9e-07 28.1 0.0 1.2 1 0 0 1 1 1 1 Putative methyltransferase Ubie_methyltran PF01209.13 gi|154150773|ref|YP_001404391.1| - 4.3e-06 26.0 0.0 5.1e-06 25.7 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.1 gi|154150773|ref|YP_001404391.1| - 9.1e-06 25.4 0.0 1e-05 25.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_24 PF13578.1 gi|154150773|ref|YP_001404391.1| - 3.2e-05 24.7 0.0 4.5e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.13 gi|154150773|ref|YP_001404391.1| - 4.9e-05 22.9 0.5 8.2e-05 22.2 0.1 1.5 2 0 0 2 2 2 1 Putative RNA methylase family UPF0020 PCMT PF01135.14 gi|154150773|ref|YP_001404391.1| - 9.8e-05 21.9 0.0 0.00014 21.4 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_12 PF08242.7 gi|154150773|ref|YP_001404391.1| - 0.00012 22.4 0.0 0.00016 22.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.9 gi|154150773|ref|YP_001404391.1| - 0.00016 20.8 0.0 0.00026 20.2 0.0 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_15 PF09445.5 gi|154150773|ref|YP_001404391.1| - 0.00017 21.1 0.0 0.00023 20.7 0.0 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_32 PF13679.1 gi|154150773|ref|YP_001404391.1| - 0.00038 20.1 0.0 0.00057 19.5 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain DOT1 PF08123.8 gi|154150773|ref|YP_001404391.1| - 0.00066 19.0 0.0 0.00095 18.5 0.0 1.2 1 0 0 1 1 1 1 Histone methylation protein DOT1 RrnaAD PF00398.15 gi|154150773|ref|YP_001404391.1| - 0.00094 18.2 0.0 0.0013 17.7 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Cons_hypoth95 PF03602.10 gi|154150773|ref|YP_001404391.1| - 0.00094 18.6 0.0 0.0015 17.9 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 GidB PF02527.10 gi|154150773|ref|YP_001404391.1| - 0.0011 18.1 0.0 0.0013 17.9 0.0 1.2 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G CMAS PF02353.15 gi|154150773|ref|YP_001404391.1| - 0.0012 18.0 0.0 0.0017 17.5 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_3 PF01596.12 gi|154150773|ref|YP_001404391.1| - 0.002 17.2 0.1 0.0024 16.9 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase tRNA_U5-meth_tr PF05958.6 gi|154150773|ref|YP_001404391.1| - 0.0058 15.3 0.0 0.0079 14.9 0.0 1.1 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Methyltransf_17 PF12692.2 gi|154150773|ref|YP_001404391.1| - 0.015 15.0 0.0 0.02 14.5 0.0 1.1 1 0 0 1 1 1 0 S-adenosyl-L-methionine methyltransferase NodS PF05401.6 gi|154150773|ref|YP_001404391.1| - 0.015 14.6 0.0 0.023 14.0 0.0 1.3 1 0 0 1 1 1 0 Nodulation protein S (NodS) N6_N4_Mtase PF01555.13 gi|154150773|ref|YP_001404391.1| - 0.02 14.3 0.0 0.029 13.8 0.0 1.2 1 0 0 1 1 1 0 DNA methylase DUF938 PF06080.7 gi|154150773|ref|YP_001404391.1| - 0.023 14.2 0.1 0.049 13.1 0.1 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF938) Methyltransf_16 PF10294.4 gi|154150773|ref|YP_001404391.1| - 0.047 13.1 0.0 0.07 12.5 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase MethyltransfD12 PF02086.10 gi|154150773|ref|YP_001404391.1| - 0.14 11.5 0.0 0.19 11.1 0.0 1.1 1 0 0 1 1 1 0 D12 class N6 adenine-specific DNA methyltransferase HATPase_c PF02518.21 gi|154150774|ref|YP_001404392.1| - 2.6e-12 46.4 0.0 4.5e-12 45.6 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF4118 PF13493.1 gi|154150774|ref|YP_001404392.1| - 1.7e-06 28.1 13.7 2.6e-06 27.5 9.5 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4118) Vpu PF00558.14 gi|154150774|ref|YP_001404392.1| - 0.046 13.2 0.2 0.046 13.2 0.1 2.5 2 1 1 3 3 3 0 Vpu protein HisKA PF00512.20 gi|154150774|ref|YP_001404392.1| - 0.079 12.9 0.1 0.22 11.5 0.1 1.7 2 0 0 2 2 2 0 His Kinase A (phospho-acceptor) domain PsiE PF06146.7 gi|154150775|ref|YP_001404393.1| - 5.2e-13 49.0 6.1 5.2e-13 49.0 4.3 1.6 2 0 0 2 2 2 1 Phosphate-starvation-inducible E MFS_2 PF13347.1 gi|154150775|ref|YP_001404393.1| - 0.12 10.7 5.4 0.032 12.6 0.2 2.0 1 1 1 2 2 2 0 MFS/sugar transport protein ERG4_ERG24 PF01222.12 gi|154150775|ref|YP_001404393.1| - 0.18 10.3 1.3 0.25 9.8 0.6 1.5 1 1 0 1 1 1 0 Ergosterol biosynthesis ERG4/ERG24 family RseC_MucC PF04246.7 gi|154150775|ref|YP_001404393.1| - 1.7 8.1 4.6 3.9 7.0 0.0 2.5 1 1 1 2 2 2 0 Positive regulator of sigma(E), RseC/MucC TP_methylase PF00590.15 gi|154150776|ref|YP_001404394.1| - 2e-49 168.1 0.2 2.4e-49 167.9 0.2 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Acetate_kinase PF00871.12 gi|154150776|ref|YP_001404394.1| - 0.087 11.3 0.0 0.12 10.9 0.0 1.2 1 0 0 1 1 1 0 Acetokinase family Radical_SAM PF04055.16 gi|154150776|ref|YP_001404394.1| - 0.1 12.8 0.0 1 9.4 0.0 2.0 1 1 0 1 1 1 0 Radical SAM superfamily Porphobil_deam PF01379.15 gi|154150777|ref|YP_001404395.1| - 3.2e-61 205.9 0.0 4.4e-61 205.5 0.0 1.1 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.10 gi|154150777|ref|YP_001404395.1| - 1.2e-07 31.6 2.3 1.9e-07 31.0 0.5 2.0 2 0 0 2 2 2 1 Porphobilinogen deaminase, C-terminal domain Aminotran_3 PF00202.16 gi|154150778|ref|YP_001404396.1| - 1.7e-61 207.9 0.0 2.4e-61 207.4 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.16 gi|154150778|ref|YP_001404396.1| - 0.021 13.7 0.0 0.029 13.3 0.0 1.3 1 0 0 1 1 1 0 Aminotransferase class I and II Beta_elim_lyase PF01212.16 gi|154150778|ref|YP_001404396.1| - 0.13 11.4 0.0 0.19 10.8 0.0 1.2 1 0 0 1 1 1 0 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.12 gi|154150778|ref|YP_001404396.1| - 0.16 10.9 0.0 0.24 10.3 0.0 1.3 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family MmgE_PrpD PF03972.9 gi|154150778|ref|YP_001404396.1| - 1.2 7.1 3.2 6.5 4.8 0.1 2.1 2 0 0 2 2 2 0 MmgE/PrpD family ALAD PF00490.16 gi|154150779|ref|YP_001404397.1| - 1.9e-133 444.3 0.0 2.2e-133 444.1 0.0 1.0 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase NTP_transf_3 PF12804.2 gi|154150779|ref|YP_001404397.1| - 0.012 15.6 0.0 0.23 11.5 0.0 2.5 2 1 0 2 2 2 0 MobA-like NTP transferase domain Shikimate_DH PF01488.15 gi|154150781|ref|YP_001404399.1| - 3.7e-33 114.5 0.0 6e-33 113.8 0.0 1.4 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase GlutR_N PF05201.10 gi|154150781|ref|YP_001404399.1| - 1.9e-30 105.4 0.0 3.9e-30 104.4 0.0 1.6 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, N-terminal domain GlutR_dimer PF00745.15 gi|154150781|ref|YP_001404399.1| - 1.4e-19 69.8 2.2 2.1e-19 69.3 0.7 1.9 1 1 1 2 2 2 1 Glutamyl-tRNAGlu reductase, dimerisation domain NAD_binding_7 PF13241.1 gi|154150781|ref|YP_001404399.1| - 0.021 15.0 0.0 0.058 13.6 0.0 1.7 1 0 0 1 1 1 0 Putative NAD(P)-binding F420_oxidored PF03807.12 gi|154150781|ref|YP_001404399.1| - 0.022 15.1 0.1 0.076 13.4 0.1 2.0 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.14 gi|154150781|ref|YP_001404399.1| - 0.024 13.8 0.1 0.043 12.9 0.1 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Toxin_39 PF15500.1 gi|154150781|ref|YP_001404399.1| - 0.092 12.8 0.7 3.9 7.6 0.1 2.6 2 0 0 2 2 2 0 Putative RNase-like toxin NAD_binding_7 PF13241.1 gi|154150782|ref|YP_001404400.1| - 2.6e-19 69.3 0.1 5.3e-19 68.3 0.0 1.5 2 0 0 2 2 2 1 Putative NAD(P)-binding CysG_dimeriser PF10414.4 gi|154150782|ref|YP_001404400.1| - 0.025 14.0 0.5 0.025 14.0 0.4 2.0 2 1 0 2 2 2 0 Sirohaem synthase dimerisation region T4_Gp59_C PF08994.5 gi|154150783|ref|YP_001404401.1| - 0.027 14.6 2.2 0.18 11.9 1.5 2.3 1 1 0 1 1 1 0 T4 gene Gp59 loader of gp41 DNA helicase C-term MCR_alpha PF02249.12 gi|154150783|ref|YP_001404401.1| - 0.085 12.8 0.1 0.16 12.0 0.1 1.3 1 0 0 1 1 1 0 Methyl-coenzyme M reductase alpha subunit, C-terminal domain FMN_red PF03358.10 gi|154150784|ref|YP_001404402.1| - 1.2e-23 83.3 0.0 1.4e-23 83.0 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|154150784|ref|YP_001404402.1| - 2e-14 53.5 0.0 2.4e-14 53.3 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.2 gi|154150784|ref|YP_001404402.1| - 0.002 18.1 0.0 0.0039 17.1 0.0 1.6 1 1 0 1 1 1 1 Flavodoxin domain Ldh_1_N PF00056.18 gi|154150784|ref|YP_001404402.1| - 0.022 14.5 0.0 0.31 10.8 0.0 2.5 1 1 2 3 3 3 0 lactate/malate dehydrogenase, NAD binding domain Response_reg PF00072.19 gi|154150785|ref|YP_001404403.1| - 3.4e-19 68.8 0.1 8.7e-19 67.5 0.1 1.7 1 0 0 1 1 1 1 Response regulator receiver domain HATPase_c PF02518.21 gi|154150785|ref|YP_001404403.1| - 2.2e-11 43.4 0.1 4.3e-11 42.5 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_3 PF08447.6 gi|154150785|ref|YP_001404403.1| - 2e-10 40.5 0.1 4.2e-10 39.5 0.1 1.6 1 0 0 1 1 1 1 PAS fold PAS PF00989.19 gi|154150785|ref|YP_001404403.1| - 1.3e-07 31.4 0.0 3e-07 30.2 0.0 1.7 1 0 0 1 1 1 1 PAS fold PAS_9 PF13426.1 gi|154150785|ref|YP_001404403.1| - 1.7e-06 28.3 0.0 5.4e-06 26.7 0.0 1.9 2 0 0 2 2 2 1 PAS domain PAS_4 PF08448.5 gi|154150785|ref|YP_001404403.1| - 2.1e-06 27.7 0.0 3.5e-06 27.0 0.0 1.4 1 0 0 1 1 1 1 PAS fold HATPase_c_3 PF13589.1 gi|154150785|ref|YP_001404403.1| - 0.027 14.1 0.0 0.061 12.9 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.20 gi|154150785|ref|YP_001404403.1| - 0.045 13.7 1.5 0.058 13.4 0.3 1.7 2 0 0 2 2 2 0 His Kinase A (phospho-acceptor) domain HATPase_c_2 PF13581.1 gi|154150785|ref|YP_001404403.1| - 0.066 13.0 0.0 0.14 11.9 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain DUF2754 PF10953.3 gi|154150786|ref|YP_001404404.1| - 0.19 11.8 2.6 0.24 11.4 0.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2754) PAS_9 PF13426.1 gi|154150787|ref|YP_001404405.1| - 1.8e-48 163.1 0.0 4.5e-19 68.7 0.0 5.0 4 1 0 4 4 4 4 PAS domain PAS_3 PF08447.6 gi|154150787|ref|YP_001404405.1| - 2.7e-46 155.5 0.1 1.3e-17 63.6 0.0 4.7 4 0 0 4 4 4 4 PAS fold PAS PF00989.19 gi|154150787|ref|YP_001404405.1| - 7e-44 148.2 0.0 6.7e-18 64.5 0.0 4.8 4 1 0 4 4 4 3 PAS fold PAS_4 PF08448.5 gi|154150787|ref|YP_001404405.1| - 8.3e-43 144.9 0.0 6.5e-15 55.1 0.0 4.8 4 0 0 4 4 4 4 PAS fold PAS_8 PF13188.1 gi|154150787|ref|YP_001404405.1| - 4.2e-29 99.3 0.0 1.4e-09 37.4 0.0 3.8 3 0 0 3 3 3 3 PAS domain HATPase_c PF02518.21 gi|154150787|ref|YP_001404405.1| - 4.2e-15 55.4 0.0 8.8e-15 54.3 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_7 PF12860.2 gi|154150787|ref|YP_001404405.1| - 8.9e-13 48.2 0.2 1.7e-05 24.7 0.0 5.0 3 3 0 3 3 3 2 PAS fold PAS_11 PF14598.1 gi|154150787|ref|YP_001404405.1| - 4.3e-07 29.8 0.0 0.00053 19.9 0.0 3.5 3 0 0 3 3 3 1 PAS domain EMP24_GP25L PF01105.19 gi|154150787|ref|YP_001404405.1| - 5.1e-07 29.5 5.5 0.0012 18.5 0.4 3.1 3 0 0 3 3 3 2 emp24/gp25L/p24 family/GOLD PAS_10 PF13596.1 gi|154150787|ref|YP_001404405.1| - 7.8e-07 29.3 0.0 0.017 15.4 0.0 3.0 2 1 0 2 2 2 2 PAS domain HOOK PF05622.7 gi|154150787|ref|YP_001404405.1| - 0.00083 17.3 10.7 0.0024 15.7 0.5 2.5 3 0 0 3 3 3 2 HOOK protein V_ATPase_I PF01496.14 gi|154150787|ref|YP_001404405.1| - 0.001 17.0 5.8 0.42 8.4 0.2 3.0 3 0 0 3 3 3 2 V-type ATPase 116kDa subunit family HATPase_c_2 PF13581.1 gi|154150787|ref|YP_001404405.1| - 0.001 18.8 0.0 0.0023 17.7 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_5 PF14501.1 gi|154150787|ref|YP_001404405.1| - 0.014 15.1 0.0 0.03 14.0 0.0 1.5 1 0 0 1 1 1 0 GHKL domain HPPK PF01288.15 gi|154150787|ref|YP_001404405.1| - 0.03 14.0 0.1 0.09 12.5 0.1 1.8 1 0 0 1 1 1 0 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DUF972 PF06156.8 gi|154150787|ref|YP_001404405.1| - 0.032 14.5 15.3 0.52 10.6 0.9 3.5 3 0 0 3 3 3 0 Protein of unknown function (DUF972) Syntaxin-6_N PF09177.6 gi|154150787|ref|YP_001404405.1| - 0.079 13.3 11.1 8.3 6.8 0.3 3.7 3 0 0 3 3 3 0 Syntaxin 6, N-terminal DUF1664 PF07889.7 gi|154150787|ref|YP_001404405.1| - 0.08 12.7 5.0 3.7 7.3 0.1 3.5 4 0 0 4 4 4 0 Protein of unknown function (DUF1664) TBPIP PF07106.8 gi|154150787|ref|YP_001404405.1| - 0.093 12.2 8.6 0.91 9.0 0.2 3.2 3 0 0 3 3 3 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) TonB_C PF03544.9 gi|154150787|ref|YP_001404405.1| - 0.093 12.9 0.1 2.9 8.1 0.0 2.7 2 0 0 2 2 2 0 Gram-negative bacterial TonB protein C-terminal IncA PF04156.9 gi|154150787|ref|YP_001404405.1| - 0.17 11.4 15.4 1.5 8.3 0.8 3.4 3 0 0 3 3 3 0 IncA protein GAS PF13851.1 gi|154150787|ref|YP_001404405.1| - 0.37 9.9 18.4 0.51 9.5 0.6 3.3 3 0 0 3 3 3 0 Growth-arrest specific micro-tubule binding DUF3552 PF12072.3 gi|154150787|ref|YP_001404405.1| - 0.45 9.7 24.5 0.94 8.6 0.3 3.3 3 0 0 3 3 3 0 Domain of unknown function (DUF3552) BLOC1_2 PF10046.4 gi|154150787|ref|YP_001404405.1| - 0.82 9.8 13.4 1.4 9.1 1.1 3.4 3 0 0 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 APG6 PF04111.7 gi|154150787|ref|YP_001404405.1| - 1.2 8.0 21.6 0.31 10.0 1.8 3.3 3 0 0 3 3 3 0 Autophagy protein Apg6 H-kinase_dim PF02895.9 gi|154150787|ref|YP_001404405.1| - 1.7 9.0 4.4 2.4 8.5 0.1 3.2 3 0 0 3 3 3 0 Signal transducing histidine kinase, homodimeric domain Spc24 PF08286.6 gi|154150787|ref|YP_001404405.1| - 4.6 6.9 21.5 2 8.1 2.7 3.4 3 0 0 3 3 3 0 Spc24 subunit of Ndc80 UPF0449 PF15136.1 gi|154150787|ref|YP_001404405.1| - 8.9 6.5 9.5 16 5.8 0.2 3.8 3 1 0 3 3 3 0 Uncharacterised protein family UPF0449 Response_reg PF00072.19 gi|154150788|ref|YP_001404406.1| - 1.3e-21 76.7 0.0 2.4e-21 75.8 0.0 1.4 1 0 0 1 1 1 1 Response regulator receiver domain PAS_9 PF13426.1 gi|154150788|ref|YP_001404406.1| - 3.2e-13 49.9 0.1 1.4e-12 47.8 0.0 2.1 3 0 0 3 3 3 1 PAS domain PAS_8 PF13188.1 gi|154150788|ref|YP_001404406.1| - 1.3e-07 31.1 0.0 3.1e-07 30.0 0.0 1.6 1 0 0 1 1 1 1 PAS domain PAS PF00989.19 gi|154150788|ref|YP_001404406.1| - 2.2e-07 30.6 0.0 4.8e-07 29.5 0.0 1.5 1 0 0 1 1 1 1 PAS fold PAS_4 PF08448.5 gi|154150788|ref|YP_001404406.1| - 4.3e-06 26.7 0.0 8e-06 25.8 0.0 1.5 1 0 0 1 1 1 1 PAS fold GAF_3 PF13492.1 gi|154150788|ref|YP_001404406.1| - 0.016 15.3 0.0 4.7 7.3 0.0 2.7 3 0 0 3 3 3 0 GAF domain Response_reg PF00072.19 gi|154150789|ref|YP_001404407.1| - 2e-09 37.4 0.0 2.5e-09 37.1 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain CheW PF01584.14 gi|154150790|ref|YP_001404408.1| - 3.6e-29 100.9 0.4 4.3e-29 100.7 0.3 1.1 1 0 0 1 1 1 1 CheW-like domain DUF3596 PF12167.3 gi|154150790|ref|YP_001404408.1| - 0.088 12.3 0.0 0.18 11.3 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3596) MCPsignal PF00015.16 gi|154150791|ref|YP_001404409.1| - 9.3e-50 169.1 57.0 4.1e-48 163.7 21.9 4.7 2 2 1 3 3 3 2 Methyl-accepting chemotaxis protein (MCP) signalling domain ApoC-I PF04691.7 gi|154150791|ref|YP_001404409.1| - 6.1e-09 35.4 0.0 4.9 6.9 0.1 7.0 7 0 0 7 7 7 1 Apolipoprotein C-I (ApoC-1) MRP-S28 PF10213.4 gi|154150791|ref|YP_001404409.1| - 1.1e-07 31.9 6.6 11 6.1 0.0 6.5 6 0 0 6 6 6 0 Mitochondrial ribosomal subunit protein HAMP PF00672.20 gi|154150791|ref|YP_001404409.1| - 1.4e-05 25.1 0.0 56 4.0 0.0 7.8 6 4 1 7 7 7 0 HAMP domain BRI3BP PF14965.1 gi|154150791|ref|YP_001404409.1| - 5.3e-05 22.6 0.0 6 6.1 0.0 5.7 6 0 0 6 6 6 1 Negative regulator of p53/TP53 Bcr-Abl_Oligo PF09036.5 gi|154150791|ref|YP_001404409.1| - 0.00018 21.3 0.0 37 4.3 0.0 6.1 7 0 0 7 7 6 0 Bcr-Abl oncoprotein oligomerisation domain DUF948 PF06103.6 gi|154150791|ref|YP_001404409.1| - 0.00019 21.1 42.1 0.037 13.8 0.6 9.8 8 3 1 10 10 9 3 Bacterial protein of unknown function (DUF948) Laminin_I PF06008.9 gi|154150791|ref|YP_001404409.1| - 0.0023 17.3 39.1 0.0033 16.7 1.9 5.9 4 2 2 6 6 6 3 Laminin Domain I DUF2433 PF10360.4 gi|154150791|ref|YP_001404409.1| - 0.014 15.6 0.3 0.98 9.7 0.2 4.2 6 0 0 6 6 4 0 Protein of unknown function (DUF2433) COG2 PF06148.6 gi|154150791|ref|YP_001404409.1| - 0.032 14.0 29.0 1.8 8.4 1.0 8.8 7 2 2 9 9 9 0 COG (conserved oligomeric Golgi) complex component, COG2 IFT57 PF10498.4 gi|154150791|ref|YP_001404409.1| - 0.045 12.4 15.4 0.048 12.4 3.9 2.8 2 0 0 2 2 2 0 Intra-flagellar transport protein 57 DUF4134 PF13572.1 gi|154150791|ref|YP_001404409.1| - 0.39 10.8 7.7 14 5.9 0.0 4.7 4 0 0 4 4 4 0 Domain of unknown function (DUF4134) IncA PF04156.9 gi|154150791|ref|YP_001404409.1| - 0.74 9.3 11.1 0.78 9.3 2.3 2.6 1 1 1 2 2 2 0 IncA protein Mnd1 PF03962.10 gi|154150791|ref|YP_001404409.1| - 0.8 9.3 17.6 2.3 7.8 1.7 4.2 1 1 2 3 3 3 0 Mnd1 family Syntaxin PF00804.20 gi|154150791|ref|YP_001404409.1| - 2.2 8.4 33.2 9.3 6.4 0.8 8.2 7 1 3 10 10 10 0 Syntaxin DUF4200 PF13863.1 gi|154150791|ref|YP_001404409.1| - 2.3 8.2 8.8 13 5.7 0.0 3.8 3 1 1 4 4 4 0 Domain of unknown function (DUF4200) LOH1CR12 PF10158.4 gi|154150791|ref|YP_001404409.1| - 2.5 7.8 14.0 10 5.9 1.4 4.5 2 2 2 4 4 4 0 Tumour suppressor protein Laminin_II PF06009.7 gi|154150791|ref|YP_001404409.1| - 2.5 7.8 38.6 1.7 8.4 1.4 6.3 4 2 2 6 6 5 0 Laminin Domain II PspA_IM30 PF04012.7 gi|154150791|ref|YP_001404409.1| - 2.5 7.3 29.9 1.6 8.0 1.3 3.6 2 1 1 3 3 3 0 PspA/IM30 family DUF3407 PF11887.3 gi|154150791|ref|YP_001404409.1| - 3.2 6.9 11.0 4.7 6.4 2.2 3.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3407) TMPIT PF07851.8 gi|154150791|ref|YP_001404409.1| - 5.5 5.9 12.2 3.8 6.4 0.5 3.1 2 1 1 3 3 3 0 TMPIT-like protein Tropomyosin_1 PF12718.2 gi|154150791|ref|YP_001404409.1| - 6 6.7 18.5 1.7 8.4 1.6 3.1 2 1 0 2 2 2 0 Tropomyosin like PAS_4 PF08448.5 gi|154150793|ref|YP_001404411.1| - 1.4e-12 47.5 0.0 4.2e-10 39.6 0.0 2.6 2 0 0 2 2 2 1 PAS fold HATPase_c PF02518.21 gi|154150793|ref|YP_001404411.1| - 1.1e-11 44.3 0.0 2.2e-11 43.4 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_9 PF13426.1 gi|154150793|ref|YP_001404411.1| - 3.6e-10 40.1 0.0 5.9e-06 26.5 0.0 3.2 3 1 0 3 3 3 2 PAS domain PAS_3 PF08447.6 gi|154150793|ref|YP_001404411.1| - 6.9e-07 29.2 0.0 2.7e-05 24.1 0.0 2.7 2 0 0 2 2 2 1 PAS fold HTH_IclR PF09339.5 gi|154150793|ref|YP_001404411.1| - 1.7e-05 24.2 0.0 4.6e-05 22.9 0.0 1.8 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_3 PF01381.17 gi|154150793|ref|YP_001404411.1| - 0.00071 19.3 0.1 0.0017 18.1 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix SPOB_a PF14689.1 gi|154150793|ref|YP_001404411.1| - 0.00098 18.6 0.0 0.0034 16.9 0.0 2.1 1 0 0 1 1 1 1 Sensor_kinase_SpoOB-type, alpha-helical domain HATPase_c_3 PF13589.1 gi|154150793|ref|YP_001404411.1| - 0.0014 18.3 0.0 0.0039 16.8 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HTH_24 PF13412.1 gi|154150793|ref|YP_001404411.1| - 0.0014 17.9 0.4 0.0056 16.0 0.0 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_40 PF14493.1 gi|154150793|ref|YP_001404411.1| - 0.0019 18.3 0.0 0.0085 16.2 0.0 2.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.1 gi|154150793|ref|YP_001404411.1| - 0.0041 16.7 0.0 0.012 15.1 0.0 1.9 1 0 0 1 1 1 1 Homeodomain-like domain PAS PF00989.19 gi|154150793|ref|YP_001404411.1| - 0.005 16.6 0.0 0.073 12.8 0.0 2.9 3 1 0 3 3 3 1 PAS fold TrmB PF01978.14 gi|154150793|ref|YP_001404411.1| - 0.0053 16.4 0.1 0.034 13.8 0.0 2.2 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_19 PF12844.2 gi|154150793|ref|YP_001404411.1| - 0.0082 16.1 0.0 0.025 14.5 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain DUF977 PF06163.6 gi|154150793|ref|YP_001404411.1| - 0.01 15.5 0.1 0.046 13.4 0.0 2.1 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF977) HATPase_c_2 PF13581.1 gi|154150793|ref|YP_001404411.1| - 0.014 15.1 0.0 0.037 13.8 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain HTH_11 PF08279.7 gi|154150793|ref|YP_001404411.1| - 0.022 14.3 0.0 0.059 13.0 0.0 1.7 1 0 0 1 1 1 0 HTH domain CLTH PF10607.4 gi|154150793|ref|YP_001404411.1| - 0.03 14.0 0.3 0.086 12.5 0.1 1.7 1 1 0 1 1 1 0 CTLH/CRA C-terminal to LisH motif domain HTH_17 PF12728.2 gi|154150793|ref|YP_001404411.1| - 0.08 13.2 0.1 0.28 11.4 0.0 2.0 1 0 0 1 1 1 0 Helix-turn-helix domain Lactamase_B PF00753.22 gi|154150794|ref|YP_001404412.1| - 4.3e-24 85.2 0.3 6e-24 84.7 0.2 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|154150794|ref|YP_001404412.1| - 1.5e-05 24.6 0.1 4e-05 23.2 0.0 1.7 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.1 gi|154150794|ref|YP_001404412.1| - 0.039 13.6 0.0 0.044 13.4 0.0 1.2 1 0 0 1 1 1 0 Beta-lactamase superfamily domain CheR PF01739.13 gi|154150795|ref|YP_001404413.1| - 6.3e-43 146.3 0.0 7.1e-43 146.1 0.0 1.0 1 0 0 1 1 1 1 CheR methyltransferase, SAM binding domain Methyltransf_2 PF00891.13 gi|154150795|ref|YP_001404413.1| - 0.05 12.7 0.0 0.064 12.4 0.0 1.1 1 0 0 1 1 1 0 O-methyltransferase DNA_pol_B PF00136.16 gi|154150796|ref|YP_001404414.1| - 2.3e-18 66.2 0.0 3.6e-12 45.8 0.0 2.4 1 1 0 1 1 1 1 DNA polymerase family B 2_5_RNA_ligase2 PF13563.1 gi|154150798|ref|YP_001404416.1| - 2e-16 60.0 0.1 2.7e-16 59.6 0.0 1.1 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily LigT_PEase PF02834.11 gi|154150798|ref|YP_001404416.1| - 0.0005 19.9 0.1 0.0096 15.8 0.0 2.2 2 0 0 2 2 2 1 LigT like Phosphoesterase CPDase PF07823.6 gi|154150798|ref|YP_001404416.1| - 0.095 12.1 0.0 0.23 10.9 0.0 1.6 2 0 0 2 2 2 0 Cyclic phosphodiesterase-like protein SKI PF01202.17 gi|154150799|ref|YP_001404417.1| - 2.4e-34 118.4 0.0 2.7e-34 118.3 0.0 1.0 1 0 0 1 1 1 1 Shikimate kinase AAA_17 PF13207.1 gi|154150799|ref|YP_001404417.1| - 7.4e-07 30.0 0.0 8.9e-07 29.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|154150799|ref|YP_001404417.1| - 8.6e-06 26.0 0.6 7.2e-05 23.1 0.4 2.1 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.1 gi|154150799|ref|YP_001404417.1| - 3.3e-05 23.7 0.0 8.6e-05 22.4 0.0 1.8 1 1 0 1 1 1 1 AAA domain Cytidylate_kin2 PF13189.1 gi|154150799|ref|YP_001404417.1| - 0.024 14.5 0.1 0.044 13.7 0.1 1.4 1 0 0 1 1 1 0 Cytidylate kinase-like family Zeta_toxin PF06414.7 gi|154150799|ref|YP_001404417.1| - 0.026 13.6 0.1 0.97 8.4 0.1 2.1 2 0 0 2 2 2 0 Zeta toxin AAA PF00004.24 gi|154150799|ref|YP_001404417.1| - 0.042 14.0 0.3 0.061 13.5 0.2 1.5 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.7 gi|154150799|ref|YP_001404417.1| - 0.07 12.1 0.3 0.11 11.5 0.1 1.4 1 1 0 1 1 1 0 Holliday junction DNA helicase ruvB N-terminus AAA_10 PF12846.2 gi|154150799|ref|YP_001404417.1| - 0.079 12.3 0.0 0.087 12.2 0.0 1.1 1 0 0 1 1 1 0 AAA-like domain AAA_25 PF13481.1 gi|154150799|ref|YP_001404417.1| - 0.12 11.8 0.4 3.2 7.0 0.3 2.2 1 1 0 1 1 1 0 AAA domain ADK PF00406.17 gi|154150799|ref|YP_001404417.1| - 0.13 12.1 0.1 1.9 8.3 0.0 2.1 2 0 0 2 2 2 0 Adenylate kinase E1-E2_ATPase PF00122.15 gi|154150800|ref|YP_001404418.1| - 1.4e-56 191.1 1.3 1.4e-56 191.1 0.9 3.0 2 1 0 2 2 2 1 E1-E2 ATPase Hydrolase PF00702.21 gi|154150800|ref|YP_001404418.1| - 1.1e-30 107.6 1.3 5.9e-30 105.2 0.8 2.1 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.2 gi|154150800|ref|YP_001404418.1| - 4.4e-14 53.0 0.0 8.5e-14 52.1 0.0 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.21 gi|154150800|ref|YP_001404418.1| - 5.3e-11 41.8 0.0 1.2e-10 40.6 0.0 1.6 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Hydrolase_3 PF08282.7 gi|154150800|ref|YP_001404418.1| - 0.0072 15.9 0.0 0.013 15.0 0.0 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Nitroreductase PF00881.19 gi|154150801|ref|YP_001404419.1| - 1e-26 93.7 0.1 1.2e-26 93.5 0.0 1.1 1 0 0 1 1 1 1 Nitroreductase family DUF955 PF06114.8 gi|154150802|ref|YP_001404420.1| - 0.017 14.8 0.2 0.031 14.0 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF955) DUF4344 PF14247.1 gi|154150802|ref|YP_001404420.1| - 0.11 12.1 0.0 0.17 11.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4344) DUF4064 PF13273.1 gi|154150803|ref|YP_001404421.1| - 0.83 9.7 9.3 0.49 10.5 4.0 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF4064) DUF3487 PF11990.3 gi|154150803|ref|YP_001404421.1| - 1.5 8.2 5.8 0.38 10.1 1.8 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3487) PhaG_MnhG_YufB PF03334.9 gi|154150804|ref|YP_001404422.1| - 0.08 13.0 13.9 0.12 12.4 9.6 1.3 1 0 0 1 1 1 0 Na+/H+ antiporter subunit UNC-50 PF05216.8 gi|154150804|ref|YP_001404422.1| - 6.5 5.8 7.7 8.3 5.5 5.3 1.2 1 0 0 1 1 1 0 UNC-50 family DUF4407 PF14362.1 gi|154150804|ref|YP_001404422.1| - 7.3 5.4 5.5 11 4.9 3.8 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) DUF2062 PF09835.4 gi|154150805|ref|YP_001404423.1| - 0.047 13.3 1.6 0.062 12.9 1.0 1.3 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2062) DUF2142 PF09913.4 gi|154150805|ref|YP_001404423.1| - 2 6.9 7.0 2.3 6.8 4.9 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2142) YrhK PF14145.1 gi|154150805|ref|YP_001404423.1| - 4.4 7.0 6.8 9.1 6.0 3.1 2.5 1 1 1 2 2 2 0 YrhK-like protein DUF1212 PF06738.7 gi|154150805|ref|YP_001404423.1| - 9.9 5.5 9.0 2.2 7.6 4.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1212) PAPS_reduct PF01507.14 gi|154150806|ref|YP_001404424.1| - 9.1e-41 139.5 0.0 1.3e-40 139.0 0.0 1.2 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family PUA PF01472.15 gi|154150806|ref|YP_001404424.1| - 3.3e-15 55.5 0.4 5.7e-15 54.7 0.3 1.4 1 0 0 1 1 1 1 PUA domain GATase PF00117.23 gi|154150807|ref|YP_001404425.1| - 3e-31 108.3 0.0 3.5e-31 108.1 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.9 gi|154150807|ref|YP_001404425.1| - 4.6e-06 26.3 0.0 7.3e-06 25.6 0.0 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain Peptidase_C26 PF07722.8 gi|154150807|ref|YP_001404425.1| - 1.3e-05 24.7 0.9 0.00026 20.4 0.6 2.5 1 1 0 1 1 1 1 Peptidase C26 SNO PF01174.14 gi|154150807|ref|YP_001404425.1| - 0.00019 21.0 0.0 0.0013 18.4 0.0 1.9 2 0 0 2 2 2 1 SNO glutamine amidotransferase family Toxin_49 PF15529.1 gi|154150808|ref|YP_001404426.1| - 0.051 13.5 0.1 1.7 8.5 0.0 2.4 2 0 0 2 2 2 0 Putative toxin 49 Alpha_GJ PF03229.8 gi|154150808|ref|YP_001404426.1| - 0.25 11.6 7.1 0.095 13.0 2.9 1.8 2 0 0 2 2 2 0 Alphavirus glycoprotein J HTH_20 PF12840.2 gi|154150809|ref|YP_001404427.1| - 6.2e-10 38.7 0.0 1.1e-09 37.9 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.14 gi|154150809|ref|YP_001404427.1| - 9.7e-06 25.2 0.2 2.2e-05 24.0 0.0 1.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.15 gi|154150809|ref|YP_001404427.1| - 9.8e-06 25.1 0.0 2e-05 24.1 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family DUF742 PF05331.6 gi|154150809|ref|YP_001404427.1| - 7e-05 22.4 0.1 0.00011 21.7 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF742) HTH_24 PF13412.1 gi|154150809|ref|YP_001404427.1| - 0.00013 21.2 0.1 0.0002 20.6 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_27 PF13463.1 gi|154150809|ref|YP_001404427.1| - 0.0023 18.2 0.3 0.0037 17.5 0.2 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_IclR PF09339.5 gi|154150809|ref|YP_001404427.1| - 0.0032 17.0 0.1 0.006 16.1 0.1 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain GerE PF00196.14 gi|154150809|ref|YP_001404427.1| - 0.0049 16.1 0.0 0.0084 15.4 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family DUF2250 PF10007.4 gi|154150809|ref|YP_001404427.1| - 0.011 15.6 0.1 0.015 15.1 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) MarR_2 PF12802.2 gi|154150809|ref|YP_001404427.1| - 0.012 15.2 0.0 0.021 14.4 0.0 1.5 1 0 0 1 1 1 0 MarR family TFIIE_alpha PF02002.12 gi|154150809|ref|YP_001404427.1| - 0.012 15.0 0.1 0.017 14.6 0.1 1.2 1 0 0 1 1 1 0 TFIIE alpha subunit HTH_45 PF14947.1 gi|154150809|ref|YP_001404427.1| - 0.012 15.3 0.2 0.023 14.5 0.1 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DUF2172 PF09940.4 gi|154150809|ref|YP_001404427.1| - 0.023 13.0 0.1 0.03 12.7 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF2172) Sulfolobus_pRN PF05584.6 gi|154150809|ref|YP_001404427.1| - 0.097 12.6 0.1 0.16 11.9 0.1 1.3 1 0 0 1 1 1 0 Sulfolobus plasmid regulatory protein HTH_9 PF08221.6 gi|154150809|ref|YP_001404427.1| - 0.13 12.1 0.1 0.27 11.1 0.1 1.6 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain tRNA-synt_2c PF01411.14 gi|154150810|ref|YP_001404428.1| - 3.2e-116 388.8 0.0 4e-116 388.5 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (A) tRNA_SAD PF07973.9 gi|154150810|ref|YP_001404428.1| - 3.2e-13 49.3 1.4 8e-13 48.0 1.0 1.7 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain DHHA1 PF02272.14 gi|154150810|ref|YP_001404428.1| - 7e-10 38.4 1.7 1.6e-09 37.2 1.2 1.7 1 0 0 1 1 1 1 DHHA1 domain GFA PF04828.9 gi|154150810|ref|YP_001404428.1| - 0.15 11.9 0.1 0.37 10.7 0.1 1.7 1 0 0 1 1 1 0 Glutathione-dependent formaldehyde-activating enzyme DUF2680 PF10925.3 gi|154150810|ref|YP_001404428.1| - 8.7 6.2 11.9 1.7 8.5 1.0 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF2680) MoeA_N PF03453.12 gi|154150812|ref|YP_001404430.1| - 5.7e-43 146.0 2.2 8.3e-43 145.5 1.5 1.3 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.19 gi|154150812|ref|YP_001404430.1| - 5.4e-33 113.4 0.1 8.5e-33 112.7 0.1 1.3 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.10 gi|154150812|ref|YP_001404430.1| - 6.9e-18 64.3 0.1 5.7e-17 61.4 0.0 2.5 2 0 0 2 2 2 1 MoeA C-terminal region (domain IV) TGT_C1 PF14809.1 gi|154150812|ref|YP_001404430.1| - 0.16 11.7 0.0 0.38 10.6 0.0 1.5 1 0 0 1 1 1 0 C1 domain of tRNA-guanine transglycosylase dimerisation SWIM PF04434.12 gi|154150813|ref|YP_001404431.1| - 8.8e-06 25.0 0.1 1.4e-05 24.3 0.1 1.4 1 0 0 1 1 1 1 SWIM zinc finger NIF3 PF01784.13 gi|154150814|ref|YP_001404432.1| - 1.8e-41 142.3 0.0 2.2e-41 142.0 0.0 1.0 1 0 0 1 1 1 1 NIF3 (NGG1p interacting factor 3) DUF39 PF01837.11 gi|154150815|ref|YP_001404433.1| - 2.1e-149 496.7 0.0 3.4e-149 496.1 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF39 CBS PF00571.23 gi|154150815|ref|YP_001404433.1| - 1.7e-22 78.9 2.3 3.2e-10 39.6 0.0 2.4 2 0 0 2 2 2 2 CBS domain TrwC PF08751.6 gi|154150815|ref|YP_001404433.1| - 0.086 12.2 0.1 0.13 11.6 0.1 1.2 1 0 0 1 1 1 0 TrwC relaxase Fer4 PF00037.22 gi|154150816|ref|YP_001404434.1| - 1e-13 50.2 13.7 2.4e-07 30.0 2.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|154150816|ref|YP_001404434.1| - 4.3e-10 39.7 22.0 1.3e-07 31.7 8.0 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|154150816|ref|YP_001404434.1| - 1.4e-09 37.4 14.0 7.2e-06 25.6 2.1 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|154150816|ref|YP_001404434.1| - 1.8e-09 37.8 11.0 5.9e-09 36.1 7.9 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|154150816|ref|YP_001404434.1| - 6.6e-09 35.1 14.9 8.7e-05 22.2 2.7 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|154150816|ref|YP_001404434.1| - 8e-08 31.9 14.3 0.00023 20.9 2.5 2.2 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|154150816|ref|YP_001404434.1| - 1.9e-07 31.3 5.7 0.0025 18.1 0.3 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|154150816|ref|YP_001404434.1| - 2.2e-07 30.6 22.2 1.7e-06 27.8 8.0 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|154150816|ref|YP_001404434.1| - 2.6e-07 31.2 9.7 0.0023 18.6 1.7 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_18 PF13746.1 gi|154150816|ref|YP_001404434.1| - 3e-07 30.7 6.8 0.00028 21.2 0.3 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|154150816|ref|YP_001404434.1| - 3.1e-06 27.0 14.8 0.0022 18.1 1.8 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|154150816|ref|YP_001404434.1| - 5.8e-06 26.2 23.2 0.0002 21.3 9.0 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|154150816|ref|YP_001404434.1| - 1.9e-05 25.1 14.5 0.0042 17.6 1.6 2.7 2 1 1 3 3 3 2 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|154150816|ref|YP_001404434.1| - 0.0001 22.6 14.3 0.0013 19.0 1.8 2.3 1 1 1 2 2 2 2 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|154150816|ref|YP_001404434.1| - 0.0049 17.3 21.0 0.2 12.3 3.5 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain NIL PF09383.5 gi|154150816|ref|YP_001404434.1| - 0.013 15.0 0.0 0.017 14.6 0.0 1.2 1 0 0 1 1 1 0 NIL domain Fer4_11 PF13247.1 gi|154150816|ref|YP_001404434.1| - 0.057 13.3 4.3 0.19 11.6 3.0 1.8 1 1 0 1 1 1 0 4Fe-4S dicluster domain Mut7-C PF01927.11 gi|154150816|ref|YP_001404434.1| - 0.094 12.6 0.3 0.13 12.2 0.2 1.2 1 0 0 1 1 1 0 Mut7-C RNAse domain ApbE PF02424.10 gi|154150817|ref|YP_001404435.1| - 1.9e-22 79.8 4.0 1.9e-22 79.8 2.8 1.6 2 0 0 2 2 2 1 ApbE family TrmB PF01978.14 gi|154150819|ref|YP_001404437.1| - 0.0072 16.0 0.0 0.0085 15.7 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB DUF2582 PF10771.4 gi|154150819|ref|YP_001404437.1| - 0.06 13.2 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2582) MarR_2 PF12802.2 gi|154150819|ref|YP_001404437.1| - 0.072 12.7 0.1 0.1 12.2 0.0 1.2 1 0 0 1 1 1 0 MarR family HTH_27 PF13463.1 gi|154150819|ref|YP_001404437.1| - 0.072 13.4 0.2 0.11 12.8 0.1 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain MarR PF01047.17 gi|154150819|ref|YP_001404437.1| - 0.089 12.5 0.0 0.13 11.9 0.0 1.2 1 0 0 1 1 1 0 MarR family ACP_syn_III_C PF08541.5 gi|154150819|ref|YP_001404437.1| - 0.12 12.4 0.0 0.2 11.6 0.0 1.3 1 0 0 1 1 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Trm56 PF01994.11 gi|154150820|ref|YP_001404438.1| - 1.9e-47 159.9 0.0 2.4e-47 159.6 0.0 1.1 1 0 0 1 1 1 1 tRNA ribose 2'-O-methyltransferase, aTrm56 Baculo_E56 PF04639.7 gi|154150820|ref|YP_001404438.1| - 0.086 11.4 0.0 0.11 11.1 0.0 1.1 1 0 0 1 1 1 0 Baculoviral E56 protein, specific to ODV envelope ATP-grasp_3 PF02655.9 gi|154150821|ref|YP_001404439.1| - 1.2e-30 106.5 0.0 1.6e-30 106.1 0.0 1.1 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_4 PF13535.1 gi|154150821|ref|YP_001404439.1| - 1.1e-11 44.8 0.0 7.6e-11 42.0 0.0 2.1 1 1 0 1 1 1 1 ATP-grasp domain ATPgrasp_Ter PF15632.1 gi|154150821|ref|YP_001404439.1| - 5.1e-10 38.6 0.0 8.9e-09 34.5 0.0 2.2 2 0 0 2 2 2 1 ATP-grasp in the biosynthetic pathway with Ter operon CPSase_L_D2 PF02786.12 gi|154150821|ref|YP_001404439.1| - 0.0033 16.7 0.1 0.4 9.9 0.0 2.3 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain RimK PF08443.6 gi|154150821|ref|YP_001404439.1| - 0.11 11.9 0.0 0.27 10.6 0.0 1.8 1 1 0 1 1 1 0 RimK-like ATP-grasp domain ATPgrasp_ST PF14397.1 gi|154150821|ref|YP_001404439.1| - 0.14 11.1 0.0 1.6 7.7 0.0 2.1 2 0 0 2 2 2 0 Sugar-transfer associated ATP-grasp TFIIE_alpha PF02002.12 gi|154150822|ref|YP_001404440.1| - 1.8e-22 78.8 1.5 3.5e-22 77.8 0.4 1.7 2 0 0 2 2 2 1 TFIIE alpha subunit HTH_9 PF08221.6 gi|154150822|ref|YP_001404440.1| - 0.0055 16.5 0.0 0.0093 15.8 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase III subunit RPC82 helix-turn-helix domain PhnA_Zn_Ribbon PF08274.7 gi|154150822|ref|YP_001404440.1| - 0.0074 16.0 0.1 0.085 12.6 0.2 2.1 1 1 1 2 2 2 2 PhnA Zinc-Ribbon Zn-ribbon_8 PF09723.5 gi|154150822|ref|YP_001404440.1| - 0.017 15.0 0.7 0.032 14.1 0.5 1.4 1 0 0 1 1 1 0 Zinc ribbon domain HTH_IclR PF09339.5 gi|154150822|ref|YP_001404440.1| - 0.02 14.4 0.0 0.039 13.5 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain zf-RING_4 PF14570.1 gi|154150822|ref|YP_001404440.1| - 0.041 13.4 2.0 0.046 13.2 0.5 1.7 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain zf-ribbon_3 PF13248.1 gi|154150822|ref|YP_001404440.1| - 0.047 12.9 0.8 0.1 11.8 0.5 1.5 1 0 0 1 1 1 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.7 gi|154150822|ref|YP_001404440.1| - 0.052 12.8 6.4 0.092 12.0 3.8 1.9 1 1 1 2 2 2 0 TFIIB zinc-binding Nudix_N_2 PF14803.1 gi|154150822|ref|YP_001404440.1| - 0.07 12.8 0.7 3.2 7.5 0.1 2.4 2 0 0 2 2 2 0 Nudix N-terminal DNA_ligase_ZBD PF03119.11 gi|154150822|ref|YP_001404440.1| - 0.073 12.7 0.1 0.14 11.8 0.1 1.5 1 0 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain TFIIS_C PF01096.13 gi|154150822|ref|YP_001404440.1| - 0.12 12.0 1.6 6.2 6.5 0.1 2.4 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zf-IS66 PF13005.2 gi|154150822|ref|YP_001404440.1| - 0.12 12.3 0.4 0.71 9.9 0.0 2.1 2 0 0 2 2 2 0 zinc-finger binding domain of transposase IS66 zinc-ribbons_6 PF07191.7 gi|154150822|ref|YP_001404440.1| - 0.13 12.0 0.3 0.34 10.7 0.2 1.6 1 1 0 1 1 1 0 zinc-ribbons zf-C2H2 PF00096.21 gi|154150822|ref|YP_001404440.1| - 0.22 11.9 2.9 5.6 7.5 0.1 2.4 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-CHY PF05495.7 gi|154150822|ref|YP_001404440.1| - 0.26 11.4 1.8 0.75 9.9 1.3 1.7 1 1 0 1 1 1 0 CHY zinc finger DUF1610 PF07754.6 gi|154150822|ref|YP_001404440.1| - 0.32 11.1 2.5 0.72 10.0 1.7 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1610) Sgf11 PF08209.6 gi|154150822|ref|YP_001404440.1| - 0.45 9.8 0.1 0.45 9.8 0.1 1.8 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) zf-Mss51 PF13824.1 gi|154150822|ref|YP_001404440.1| - 0.47 10.3 2.2 1.7 8.5 1.5 1.9 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 Zn_Tnp_IS1595 PF12760.2 gi|154150822|ref|YP_001404440.1| - 0.58 10.0 3.7 2.2 8.1 0.2 2.4 1 1 0 2 2 2 0 Transposase zinc-ribbon domain DUF4428 PF14471.1 gi|154150822|ref|YP_001404440.1| - 0.61 9.8 2.8 1.8 8.3 0.9 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4428) zinc_ribbon_2 PF13240.1 gi|154150822|ref|YP_001404440.1| - 5.3 6.6 7.1 0.18 11.3 0.7 1.6 2 0 0 2 2 1 0 zinc-ribbon domain HD PF01966.17 gi|154150823|ref|YP_001404441.1| - 1.7e-13 50.6 0.0 2.3e-13 50.2 0.0 1.2 1 0 0 1 1 1 1 HD domain HDOD PF08668.7 gi|154150823|ref|YP_001404441.1| - 0.009 15.3 0.0 0.23 10.7 0.0 2.2 1 1 1 2 2 2 1 HDOD domain Crisp PF08562.5 gi|154150823|ref|YP_001404441.1| - 0.027 14.7 1.7 0.09 13.0 1.2 1.8 1 0 0 1 1 1 0 Crisp TIL PF01826.12 gi|154150823|ref|YP_001404441.1| - 0.035 14.2 1.8 0.035 14.2 1.2 1.9 2 0 0 2 2 2 0 Trypsin Inhibitor like cysteine rich domain ParA PF10609.4 gi|154150825|ref|YP_001404443.1| - 9.4e-36 121.5 0.1 1.6e-35 120.8 0.1 1.4 1 0 0 1 1 1 1 ParA/MinD ATPase like CbiA PF01656.18 gi|154150825|ref|YP_001404443.1| - 7.5e-21 74.4 0.0 1.3e-20 73.7 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.1 gi|154150825|ref|YP_001404443.1| - 4.1e-11 43.0 0.0 3.1e-10 40.1 0.0 2.0 1 1 0 1 1 1 1 AAA domain MipZ PF09140.6 gi|154150825|ref|YP_001404443.1| - 1.6e-08 33.9 0.0 2.8e-08 33.1 0.0 1.4 1 1 0 1 1 1 1 ATPase MipZ ArsA_ATPase PF02374.10 gi|154150825|ref|YP_001404443.1| - 2.4e-07 30.1 0.8 5.5e-06 25.6 0.1 2.5 2 1 1 3 3 3 1 Anion-transporting ATPase AAA_26 PF13500.1 gi|154150825|ref|YP_001404443.1| - 0.00064 19.3 1.0 0.46 10.0 0.2 2.5 2 1 0 2 2 2 2 AAA domain Fer4_NifH PF00142.13 gi|154150825|ref|YP_001404443.1| - 0.003 16.8 0.5 0.014 14.6 0.0 2.1 2 1 1 3 3 3 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family APS_kinase PF01583.15 gi|154150825|ref|YP_001404443.1| - 0.0092 15.6 0.0 0.013 15.1 0.0 1.2 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_25 PF13481.1 gi|154150825|ref|YP_001404443.1| - 0.011 15.1 0.1 0.023 14.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain MobB PF03205.9 gi|154150825|ref|YP_001404443.1| - 0.03 14.0 0.1 0.054 13.1 0.1 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_29 PF13555.1 gi|154150825|ref|YP_001404443.1| - 0.03 13.8 0.2 0.72 9.4 0.1 2.3 2 0 0 2 2 2 0 P-loop containing region of AAA domain PhnA_Zn_Ribbon PF08274.7 gi|154150825|ref|YP_001404443.1| - 0.03 14.0 0.5 0.071 12.9 0.4 1.6 1 0 0 1 1 1 0 PhnA Zinc-Ribbon ArgK PF03308.11 gi|154150825|ref|YP_001404443.1| - 0.038 12.7 0.1 0.061 12.0 0.1 1.2 1 0 0 1 1 1 0 ArgK protein zinc_ribbon_2 PF13240.1 gi|154150825|ref|YP_001404443.1| - 0.051 13.0 0.3 0.13 11.7 0.2 1.7 1 0 0 1 1 1 0 zinc-ribbon domain YhjQ PF06564.7 gi|154150825|ref|YP_001404443.1| - 0.057 12.7 0.2 0.18 11.1 0.1 1.7 2 0 0 2 2 2 0 YhjQ protein AAA_17 PF13207.1 gi|154150825|ref|YP_001404443.1| - 0.064 14.0 0.2 0.2 12.5 0.2 1.7 2 0 0 2 2 2 0 AAA domain AAA_10 PF12846.2 gi|154150825|ref|YP_001404443.1| - 0.21 11.0 0.2 0.31 10.4 0.1 1.2 1 0 0 1 1 1 0 AAA-like domain Gp_dh_C PF02800.15 gi|154150826|ref|YP_001404444.1| - 1.5e-58 196.6 2.8 2e-58 196.2 2.0 1.2 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Gp_dh_N PF00044.19 gi|154150826|ref|YP_001404444.1| - 1.6e-40 138.5 0.1 3.4e-39 134.2 0.0 2.4 2 1 1 3 3 3 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Desulfoferrod_N PF06397.7 gi|154150827|ref|YP_001404445.1| - 9.5e-14 50.5 4.2 9.5e-14 50.5 2.9 1.5 2 0 0 2 2 2 1 Desulfoferrodoxin, N-terminal domain zf-Sec23_Sec24 PF04810.10 gi|154150827|ref|YP_001404445.1| - 0.077 12.5 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 Sec23/Sec24 zinc finger TF_Zn_Ribbon PF08271.7 gi|154150827|ref|YP_001404445.1| - 0.11 11.7 0.8 0.32 10.3 0.6 1.6 1 1 1 2 2 2 0 TFIIB zinc-binding zf-C2HC5 PF06221.8 gi|154150827|ref|YP_001404445.1| - 0.15 11.8 0.6 0.22 11.3 0.4 1.3 1 1 0 1 1 1 0 Putative zinc finger motif, C2HC5-type E1-E2_ATPase PF00122.15 gi|154150828|ref|YP_001404446.1| - 1.4e-58 197.6 0.6 1.4e-58 197.6 0.4 2.8 4 1 0 4 4 4 1 E1-E2 ATPase Hydrolase PF00702.21 gi|154150828|ref|YP_001404446.1| - 1.3e-23 84.5 0.1 2.1e-23 83.8 0.1 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.21 gi|154150828|ref|YP_001404446.1| - 4.3e-22 77.3 0.3 1.4e-21 75.6 0.0 2.1 2 0 0 2 2 2 1 Cation transporter/ATPase, N-terminus Cation_ATPase_C PF00689.16 gi|154150828|ref|YP_001404446.1| - 5.8e-17 61.8 12.1 5.8e-17 61.8 8.4 2.8 3 0 0 3 3 3 1 Cation transporting ATPase, C-terminus HAD PF12710.2 gi|154150828|ref|YP_001404446.1| - 4.9e-14 52.9 0.1 8.4e-14 52.1 0.1 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like2 PF13246.1 gi|154150828|ref|YP_001404446.1| - 1e-08 35.0 0.0 2e-08 34.0 0.0 1.5 1 0 0 1 1 1 1 Putative hydrolase of sodium-potassium ATPase alpha subunit Hydrolase_3 PF08282.7 gi|154150828|ref|YP_001404446.1| - 0.00044 19.9 0.4 0.00085 18.9 0.3 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Aldo_ket_red PF00248.16 gi|154150829|ref|YP_001404447.1| - 3.1e-46 157.4 0.0 3.9e-46 157.1 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.1 gi|154150829|ref|YP_001404447.1| - 4e-10 39.8 6.6 8.4e-10 38.8 4.6 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|154150829|ref|YP_001404447.1| - 6.4e-08 32.7 8.3 1.2e-07 31.8 5.7 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|154150829|ref|YP_001404447.1| - 1.7e-07 31.1 7.0 3.4e-07 30.1 4.9 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|154150829|ref|YP_001404447.1| - 4.2e-07 30.2 1.4 0.011 16.1 0.1 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|154150829|ref|YP_001404447.1| - 7.6e-05 22.4 13.1 0.0021 17.8 1.7 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.22 gi|154150829|ref|YP_001404447.1| - 0.00028 20.3 13.3 0.00085 18.8 1.6 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|154150829|ref|YP_001404447.1| - 0.00041 21.0 5.2 0.11 13.2 1.0 2.5 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.2 gi|154150829|ref|YP_001404447.1| - 0.0091 15.8 14.2 0.076 12.9 2.8 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|154150829|ref|YP_001404447.1| - 0.01 15.6 2.6 0.01 15.6 1.8 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_7 PF12838.2 gi|154150829|ref|YP_001404447.1| - 0.011 16.1 12.0 0.046 14.1 8.3 2.0 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_20 PF14691.1 gi|154150829|ref|YP_001404447.1| - 0.011 15.3 2.8 0.052 13.1 0.1 2.2 2 0 0 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_4 PF12800.2 gi|154150829|ref|YP_001404447.1| - 0.014 15.7 13.4 0.03 14.6 2.1 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_21 PF14697.1 gi|154150829|ref|YP_001404447.1| - 0.094 12.5 7.1 3.1 7.7 0.9 2.3 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|154150829|ref|YP_001404447.1| - 1.1 9.9 14.5 0.84 10.3 3.4 2.7 2 1 0 2 2 2 0 4Fe-4S binding domain Lactamase_B PF00753.22 gi|154150830|ref|YP_001404448.1| - 1.1e-20 74.1 2.8 1.5e-20 73.6 2.0 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|154150830|ref|YP_001404448.1| - 1.6e-05 24.5 0.0 1.9e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain TetR_N PF00440.18 gi|154150831|ref|YP_001404449.1| - 9.1e-15 54.0 0.0 1.7e-14 53.1 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family ABC_tran PF00005.22 gi|154150832|ref|YP_001404450.1| - 8.6e-26 90.8 0.0 1.1e-25 90.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|154150832|ref|YP_001404450.1| - 9.7e-14 52.0 0.1 8.7e-09 35.7 0.0 2.1 2 0 0 2 2 2 2 AAA domain AAA_15 PF13175.1 gi|154150832|ref|YP_001404450.1| - 3.4e-06 26.3 0.4 0.00018 20.6 0.1 2.0 2 0 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.1 gi|154150832|ref|YP_001404450.1| - 0.0023 17.3 0.2 0.0042 16.5 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.14 gi|154150832|ref|YP_001404450.1| - 0.006 15.8 0.9 0.28 10.3 0.2 2.1 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_25 PF13481.1 gi|154150832|ref|YP_001404450.1| - 0.018 14.4 0.0 0.031 13.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_10 PF12846.2 gi|154150832|ref|YP_001404450.1| - 0.025 14.0 0.0 0.044 13.2 0.0 1.3 1 0 0 1 1 1 0 AAA-like domain AAA_23 PF13476.1 gi|154150832|ref|YP_001404450.1| - 0.031 14.5 0.1 0.053 13.8 0.1 1.3 1 0 0 1 1 1 0 AAA domain ArgK PF03308.11 gi|154150832|ref|YP_001404450.1| - 0.046 12.4 0.6 0.068 11.9 0.4 1.2 1 0 0 1 1 1 0 ArgK protein FAA_hydrolase PF01557.13 gi|154150832|ref|YP_001404450.1| - 0.052 12.9 0.0 0.081 12.3 0.0 1.2 1 0 0 1 1 1 0 Fumarylacetoacetate (FAA) hydrolase family AAA_33 PF13671.1 gi|154150832|ref|YP_001404450.1| - 0.062 13.1 0.0 0.11 12.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain DUF258 PF03193.11 gi|154150832|ref|YP_001404450.1| - 0.067 12.3 0.0 0.099 11.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF258 AAA_16 PF13191.1 gi|154150832|ref|YP_001404450.1| - 0.094 12.6 0.0 0.2 11.6 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain Dynamin_N PF00350.18 gi|154150832|ref|YP_001404450.1| - 0.1 12.3 0.1 0.31 10.8 0.1 1.8 1 1 0 1 1 1 0 Dynamin family AAA_17 PF13207.1 gi|154150832|ref|YP_001404450.1| - 0.16 12.7 0.1 0.47 11.2 0.1 2.1 1 1 0 1 1 1 0 AAA domain UPF0118 PF01594.11 gi|154150834|ref|YP_001404452.1| - 1.8e-34 119.2 45.3 2.5e-34 118.7 31.4 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF20 CbiM PF01891.11 gi|154150836|ref|YP_001404454.1| - 2.2e-56 190.7 18.1 2.4e-56 190.5 12.5 1.0 1 0 0 1 1 1 1 Cobalt uptake substrate-specific transmembrane region DUF1129 PF06570.6 gi|154150836|ref|YP_001404454.1| - 1.2 8.4 8.8 0.17 11.2 3.0 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF1129) DUF1212 PF06738.7 gi|154150836|ref|YP_001404454.1| - 2.6 7.4 14.6 1.5 8.2 7.4 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1212) CbiN PF02553.10 gi|154150837|ref|YP_001404455.1| - 6.8e-20 70.8 0.5 8.7e-20 70.5 0.3 1.1 1 0 0 1 1 1 1 Cobalt transport protein component CbiN CbiQ PF02361.11 gi|154150838|ref|YP_001404456.1| - 2.3e-31 109.0 13.5 3.2e-31 108.6 9.4 1.2 1 0 0 1 1 1 1 Cobalt transport protein ABC_tran PF00005.22 gi|154150839|ref|YP_001404457.1| - 2.7e-31 108.6 0.0 4.6e-31 107.9 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|154150839|ref|YP_001404457.1| - 1.6e-18 67.7 0.0 4.7e-13 49.7 0.0 2.1 2 0 0 2 2 2 2 AAA domain SMC_N PF02463.14 gi|154150839|ref|YP_001404457.1| - 1.7e-06 27.4 0.0 0.00025 20.3 0.0 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.1 gi|154150839|ref|YP_001404457.1| - 2.4e-06 26.8 0.0 8.1e-05 21.8 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA_13 PF13166.1 gi|154150839|ref|YP_001404457.1| - 3.5e-05 22.5 0.0 0.004 15.6 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.1 gi|154150839|ref|YP_001404457.1| - 0.00046 19.6 0.1 0.00096 18.6 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain IstB_IS21 PF01695.12 gi|154150839|ref|YP_001404457.1| - 0.0034 16.8 0.0 1.5 8.2 0.0 2.4 2 0 0 2 2 2 2 IstB-like ATP binding protein SbcCD_C PF13558.1 gi|154150839|ref|YP_001404457.1| - 0.0069 16.2 0.4 0.043 13.7 0.3 2.1 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit Zeta_toxin PF06414.7 gi|154150839|ref|YP_001404457.1| - 0.0082 15.2 0.0 0.024 13.7 0.0 1.7 2 0 0 2 2 2 1 Zeta toxin AAA_30 PF13604.1 gi|154150839|ref|YP_001404457.1| - 0.012 15.1 0.2 0.049 13.1 0.1 1.9 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.1 gi|154150839|ref|YP_001404457.1| - 0.021 14.6 0.0 0.5 10.2 0.0 2.6 2 1 0 2 2 2 0 AAA domain AAA_23 PF13476.1 gi|154150839|ref|YP_001404457.1| - 0.023 15.0 0.0 0.039 14.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.1 gi|154150839|ref|YP_001404457.1| - 0.052 13.5 0.0 1.7 8.6 0.0 2.8 3 0 0 3 3 3 0 AAA domain AFG1_ATPase PF03969.11 gi|154150839|ref|YP_001404457.1| - 0.072 11.8 0.0 2 7.1 0.0 2.2 2 0 0 2 2 2 0 AFG1-like ATPase BCA_ABC_TP_C PF12399.3 gi|154150839|ref|YP_001404457.1| - 0.08 12.6 0.1 1.1 9.0 0.0 2.4 2 0 0 2 2 2 0 Branched-chain amino acid ATP-binding cassette transporter AAA_24 PF13479.1 gi|154150839|ref|YP_001404457.1| - 0.13 11.8 0.2 0.43 10.1 0.1 1.8 2 0 0 2 2 2 0 AAA domain DUF258 PF03193.11 gi|154150839|ref|YP_001404457.1| - 0.15 11.2 0.0 0.66 9.1 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function, DUF258 Yip1 PF04893.12 gi|154150840|ref|YP_001404458.1| - 3.1e-33 114.6 22.6 4.3e-33 114.2 15.6 1.1 1 0 0 1 1 1 1 Yip1 domain DUF1282 PF06930.7 gi|154150840|ref|YP_001404458.1| - 3.2e-05 23.6 23.7 8.8e-05 22.2 15.5 2.1 1 1 0 1 1 1 1 Protein of unknown function (DUF1282) PgaD PF13994.1 gi|154150840|ref|YP_001404458.1| - 4.8 6.6 11.9 2.2 7.7 0.9 2.5 2 1 0 2 2 2 0 PgaD-like protein Yip1 PF04893.12 gi|154150841|ref|YP_001404459.1| - 2.2e-08 33.8 21.2 2.2e-08 33.8 14.7 1.7 1 1 1 2 2 2 1 Yip1 domain DUF4112 PF13430.1 gi|154150841|ref|YP_001404459.1| - 0.65 9.9 4.8 0.86 9.5 3.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4112) DUF1282 PF06930.7 gi|154150841|ref|YP_001404459.1| - 0.98 9.0 14.3 1.6 8.3 8.4 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1282) AP_endonuc_2 PF01261.19 gi|154150842|ref|YP_001404460.1| - 1.7e-13 50.3 0.3 2.8e-13 49.6 0.2 1.4 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel MS_channel PF00924.13 gi|154150843|ref|YP_001404461.1| - 2.7e-55 186.9 2.0 2.7e-55 186.9 1.4 1.7 2 0 0 2 2 2 1 Mechanosensitive ion channel Colicin_V PF02674.11 gi|154150843|ref|YP_001404461.1| - 0.096 12.5 10.0 0.057 13.2 1.4 2.6 1 1 1 2 2 2 0 Colicin V production protein TM_helix PF05552.7 gi|154150843|ref|YP_001404461.1| - 0.32 10.6 6.9 0.27 10.9 1.3 2.7 2 0 0 2 2 2 0 Conserved TM helix Virul_fac_BrkB PF03631.10 gi|154150843|ref|YP_001404461.1| - 0.97 8.7 14.6 2.9 7.1 3.8 2.2 1 1 1 2 2 2 0 Virulence factor BrkB MotA_ExbB PF01618.11 gi|154150843|ref|YP_001404461.1| - 1.6 8.3 4.1 0.48 10.0 0.1 2.0 2 0 0 2 2 2 0 MotA/TolQ/ExbB proton channel family HAMP PF00672.20 gi|154150843|ref|YP_001404461.1| - 8.9 6.5 11.0 1.2 9.3 1.0 2.9 3 0 0 3 3 3 0 HAMP domain HypD PF01924.11 gi|154150844|ref|YP_001404462.1| - 1e-134 448.8 0.2 1.3e-134 448.4 0.1 1.0 1 0 0 1 1 1 1 Hydrogenase formation hypA family CbiQ PF02361.11 gi|154150845|ref|YP_001404463.1| - 4.4e-29 101.6 13.6 6.1e-29 101.1 9.4 1.2 1 0 0 1 1 1 1 Cobalt transport protein Claudin_3 PF06653.6 gi|154150845|ref|YP_001404463.1| - 0.86 9.3 10.7 0.9 9.2 3.1 2.4 2 0 0 2 2 2 0 Tight junction protein, Claudin-like Claudin_2 PF13903.1 gi|154150845|ref|YP_001404463.1| - 4.2 7.0 11.3 2.3 7.8 2.6 2.7 3 0 0 3 3 3 0 PMP-22/EMP/MP20/Claudin tight junction ABC_tran PF00005.22 gi|154150846|ref|YP_001404464.1| - 1.9e-55 186.8 0.0 2e-29 102.6 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.1 gi|154150846|ref|YP_001404464.1| - 3.7e-24 86.1 1.7 5.1e-08 33.2 0.3 4.1 3 1 1 4 4 4 3 AAA domain SMC_N PF02463.14 gi|154150846|ref|YP_001404464.1| - 9.3e-21 74.0 0.1 9.2e-11 41.3 0.0 3.0 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.1 gi|154150846|ref|YP_001404464.1| - 5.5e-12 46.0 0.4 3.8e-05 23.7 0.0 2.8 2 2 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.1 gi|154150846|ref|YP_001404464.1| - 4.5e-10 39.7 3.5 0.00037 20.6 0.0 3.3 2 2 0 2 2 2 2 AAA domain AAA_29 PF13555.1 gi|154150846|ref|YP_001404464.1| - 4.8e-10 38.8 0.2 0.00019 20.8 0.0 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain IstB_IS21 PF01695.12 gi|154150846|ref|YP_001404464.1| - 6.2e-09 35.5 0.8 0.0083 15.5 0.0 4.2 4 0 0 4 4 4 1 IstB-like ATP binding protein AAA_25 PF13481.1 gi|154150846|ref|YP_001404464.1| - 1.5e-08 34.2 1.6 0.0018 17.7 0.1 3.5 4 0 0 4 4 4 2 AAA domain AAA_17 PF13207.1 gi|154150846|ref|YP_001404464.1| - 5.1e-08 33.7 2.9 0.0012 19.6 0.2 3.2 2 2 1 3 3 2 2 AAA domain SbcCD_C PF13558.1 gi|154150846|ref|YP_001404464.1| - 1.5e-07 31.2 0.1 0.053 13.4 0.0 3.4 2 1 0 2 2 2 2 Putative exonuclease SbcCD, C subunit AAA_23 PF13476.1 gi|154150846|ref|YP_001404464.1| - 2.3e-07 31.3 0.3 0.0021 18.4 0.0 2.3 2 1 0 2 2 2 2 AAA domain DUF258 PF03193.11 gi|154150846|ref|YP_001404464.1| - 2.8e-07 29.8 0.1 0.02 14.0 0.0 2.9 2 1 0 2 2 2 2 Protein of unknown function, DUF258 AAA_19 PF13245.1 gi|154150846|ref|YP_001404464.1| - 3.5e-07 29.8 5.1 0.00062 19.4 0.2 3.7 3 0 0 3 3 3 1 Part of AAA domain AAA_13 PF13166.1 gi|154150846|ref|YP_001404464.1| - 3.8e-07 28.9 0.9 0.14 10.5 0.0 3.7 4 0 0 4 4 4 2 AAA domain AAA_30 PF13604.1 gi|154150846|ref|YP_001404464.1| - 4.4e-07 29.6 0.8 0.029 13.9 0.0 3.0 3 1 0 3 3 2 2 AAA domain MobB PF03205.9 gi|154150846|ref|YP_001404464.1| - 7.5e-07 28.9 2.1 0.028 14.1 0.0 3.0 3 0 0 3 3 2 2 Molybdopterin guanine dinucleotide synthesis protein B AAA_18 PF13238.1 gi|154150846|ref|YP_001404464.1| - 8.4e-07 29.3 2.6 0.02 15.1 0.6 3.5 3 1 0 3 3 3 2 AAA domain UPF0079 PF02367.12 gi|154150846|ref|YP_001404464.1| - 9.3e-07 28.5 0.5 0.038 13.6 0.0 2.5 2 0 0 2 2 2 2 Uncharacterised P-loop hydrolase UPF0079 SRP54 PF00448.17 gi|154150846|ref|YP_001404464.1| - 1.2e-06 28.1 0.3 0.0023 17.3 0.0 2.4 2 0 0 2 2 2 2 SRP54-type protein, GTPase domain KaiC PF06745.8 gi|154150846|ref|YP_001404464.1| - 1.6e-06 27.4 0.5 0.06 12.4 0.0 3.2 3 0 0 3 3 3 2 KaiC AAA PF00004.24 gi|154150846|ref|YP_001404464.1| - 1.7e-06 28.2 0.6 0.0046 17.1 0.0 3.5 4 1 0 4 4 3 1 ATPase family associated with various cellular activities (AAA) Arch_ATPase PF01637.13 gi|154150846|ref|YP_001404464.1| - 3.3e-06 26.9 0.0 0.12 12.1 0.0 3.2 3 1 0 3 3 2 2 Archaeal ATPase NACHT PF05729.7 gi|154150846|ref|YP_001404464.1| - 8e-06 25.6 0.5 0.011 15.4 0.0 2.8 3 0 0 3 3 2 1 NACHT domain Mg_chelatase PF01078.16 gi|154150846|ref|YP_001404464.1| - 9.4e-06 24.9 0.4 0.066 12.3 0.3 2.8 3 0 0 3 3 3 2 Magnesium chelatase, subunit ChlI NTPase_1 PF03266.10 gi|154150846|ref|YP_001404464.1| - 1.5e-05 24.7 5.9 0.01 15.5 0.2 3.3 4 0 0 4 4 3 2 NTPase NB-ARC PF00931.17 gi|154150846|ref|YP_001404464.1| - 1.5e-05 23.9 0.0 0.015 14.2 0.0 2.9 3 0 0 3 3 3 1 NB-ARC domain Miro PF08477.8 gi|154150846|ref|YP_001404464.1| - 3.6e-05 24.2 0.0 0.011 16.2 0.0 2.7 2 0 0 2 2 2 1 Miro-like protein AAA_14 PF13173.1 gi|154150846|ref|YP_001404464.1| - 5.8e-05 23.0 0.0 0.57 10.0 0.0 3.2 2 1 0 3 3 3 2 AAA domain AAA_28 PF13521.1 gi|154150846|ref|YP_001404464.1| - 6.8e-05 22.8 2.5 0.079 12.9 0.0 2.6 2 1 0 2 2 2 2 AAA domain AAA_33 PF13671.1 gi|154150846|ref|YP_001404464.1| - 8.2e-05 22.5 4.8 0.16 11.8 0.2 3.5 2 2 0 2 2 2 2 AAA domain DEAD PF00270.24 gi|154150846|ref|YP_001404464.1| - 9.8e-05 21.9 0.1 0.027 13.9 0.0 2.6 2 1 0 2 2 2 1 DEAD/DEAH box helicase AAA_24 PF13479.1 gi|154150846|ref|YP_001404464.1| - 0.00011 21.8 2.0 0.22 11.0 0.2 3.1 3 0 0 3 3 3 2 AAA domain AAA_5 PF07728.9 gi|154150846|ref|YP_001404464.1| - 0.00025 20.7 1.8 0.074 12.7 0.0 3.4 4 0 0 4 4 3 1 AAA domain (dynein-related subfamily) T2SE PF00437.15 gi|154150846|ref|YP_001404464.1| - 0.00026 20.0 1.4 0.017 14.0 0.1 2.6 2 1 0 2 2 2 1 Type II/IV secretion system protein PduV-EutP PF10662.4 gi|154150846|ref|YP_001404464.1| - 0.00027 20.4 0.1 0.16 11.4 0.0 2.5 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation AAA_10 PF12846.2 gi|154150846|ref|YP_001404464.1| - 0.00027 20.4 0.3 0.56 9.5 0.0 2.7 3 0 0 3 3 2 2 AAA-like domain RNA_helicase PF00910.17 gi|154150846|ref|YP_001404464.1| - 0.00035 20.7 0.0 1.2 9.3 0.0 2.5 2 0 0 2 2 2 2 RNA helicase AAA_15 PF13175.1 gi|154150846|ref|YP_001404464.1| - 0.00039 19.6 0.0 0.074 12.0 0.0 2.9 4 0 0 4 4 3 1 AAA ATPase domain PRK PF00485.13 gi|154150846|ref|YP_001404464.1| - 0.00074 19.1 2.2 0.68 9.4 0.1 3.0 3 0 0 3 3 3 2 Phosphoribulokinase / Uridine kinase family cobW PF02492.14 gi|154150846|ref|YP_001404464.1| - 0.001 18.5 1.0 1.4 8.3 0.0 2.7 2 0 0 2 2 2 2 CobW/HypB/UreG, nucleotide-binding domain Zeta_toxin PF06414.7 gi|154150846|ref|YP_001404464.1| - 0.001 18.2 1.1 1.9 7.5 0.0 3.0 3 0 0 3 3 3 1 Zeta toxin APS_kinase PF01583.15 gi|154150846|ref|YP_001404464.1| - 0.0011 18.6 0.3 0.17 11.5 0.1 2.8 3 0 0 3 3 2 1 Adenylylsulphate kinase Sigma54_activ_2 PF14532.1 gi|154150846|ref|YP_001404464.1| - 0.0012 18.9 0.0 0.86 9.6 0.0 2.7 3 0 0 3 3 2 1 Sigma-54 interaction domain Sigma54_activat PF00158.21 gi|154150846|ref|YP_001404464.1| - 0.0012 18.3 0.1 0.33 10.4 0.0 2.5 2 0 0 2 2 2 1 Sigma-54 interaction domain ATP_bind_1 PF03029.12 gi|154150846|ref|YP_001404464.1| - 0.0013 18.3 1.0 1.2 8.6 0.0 2.4 2 0 0 2 2 2 2 Conserved hypothetical ATP binding protein PhoH PF02562.11 gi|154150846|ref|YP_001404464.1| - 0.0021 17.3 0.1 0.11 11.7 0.0 2.5 2 0 0 2 2 2 1 PhoH-like protein G-alpha PF00503.15 gi|154150846|ref|YP_001404464.1| - 0.0024 16.6 0.0 0.0072 15.0 0.0 1.7 2 0 0 2 2 2 1 G-protein alpha subunit ATP-synt_ab PF00006.20 gi|154150846|ref|YP_001404464.1| - 0.0024 17.3 0.2 0.28 10.6 0.0 2.8 3 0 0 3 3 3 1 ATP synthase alpha/beta family, nucleotide-binding domain HAD PF12710.2 gi|154150846|ref|YP_001404464.1| - 0.0028 17.8 0.0 0.0059 16.7 0.0 1.6 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase FtsK_SpoIIIE PF01580.13 gi|154150846|ref|YP_001404464.1| - 0.0098 15.3 0.1 0.89 8.9 0.0 2.3 2 0 0 2 2 2 1 FtsK/SpoIIIE family ArgK PF03308.11 gi|154150846|ref|YP_001404464.1| - 0.014 14.1 0.8 0.48 9.1 0.0 2.5 3 0 0 3 3 2 0 ArgK protein MMR_HSR1 PF01926.18 gi|154150846|ref|YP_001404464.1| - 0.016 15.1 0.7 5.1 7.0 0.0 2.8 2 1 0 2 2 2 0 50S ribosome-binding GTPase Ribosomal_L4 PF00573.17 gi|154150846|ref|YP_001404464.1| - 0.017 14.5 0.1 0.077 12.3 0.0 1.9 2 0 0 2 2 2 0 Ribosomal protein L4/L1 family MukB PF04310.7 gi|154150846|ref|YP_001404464.1| - 0.02 14.2 0.0 0.048 12.9 0.0 1.5 1 0 0 1 1 1 0 MukB N-terminal TIP49 PF06068.8 gi|154150846|ref|YP_001404464.1| - 0.026 13.2 0.4 0.2 10.3 0.2 2.1 2 0 0 2 2 2 0 TIP49 C-terminus PEPCK_ATP PF01293.15 gi|154150846|ref|YP_001404464.1| - 0.03 12.8 0.2 0.66 8.4 0.0 2.1 2 0 0 2 2 2 0 Phosphoenolpyruvate carboxykinase Rad17 PF03215.10 gi|154150846|ref|YP_001404464.1| - 0.04 12.6 0.0 0.13 10.8 0.0 1.7 2 0 0 2 2 2 0 Rad17 cell cycle checkpoint protein RNA12 PF10443.4 gi|154150846|ref|YP_001404464.1| - 0.051 12.0 0.0 6.4 5.1 0.0 2.3 2 0 0 2 2 2 0 RNA12 protein KAP_NTPase PF07693.9 gi|154150846|ref|YP_001404464.1| - 0.058 12.3 0.0 3.8 6.4 0.0 2.2 2 0 0 2 2 2 0 KAP family P-loop domain Septin PF00735.13 gi|154150846|ref|YP_001404464.1| - 0.075 12.0 0.6 8.8 5.2 0.0 2.2 2 0 0 2 2 2 0 Septin DUF2791 PF10923.3 gi|154150846|ref|YP_001404464.1| - 0.078 11.5 0.0 0.2 10.2 0.0 1.6 2 0 0 2 2 2 0 P-loop Domain of unknown function (DUF2791) ABC_ATPase PF09818.4 gi|154150846|ref|YP_001404464.1| - 0.15 10.6 3.4 23 3.4 0.0 3.8 4 0 0 4 4 4 0 Predicted ATPase of the ABC class ESX-1_EspG PF14011.1 gi|154150846|ref|YP_001404464.1| - 0.19 10.9 1.9 0.61 9.2 0.2 2.3 1 1 1 2 2 2 0 EspG family DUF2075 PF09848.4 gi|154150846|ref|YP_001404464.1| - 0.26 10.2 1.2 0.87 8.4 0.1 2.0 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) QCR10 PF09796.4 gi|154150847|ref|YP_001404465.1| - 4.4 7.0 6.2 5 6.8 2.9 2.0 1 1 1 2 2 2 0 Ubiquinol-cytochrome-c reductase complex subunit (QCR10) Thioredoxin PF00085.15 gi|154150848|ref|YP_001404466.1| - 0.0056 16.3 0.0 0.0083 15.7 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin MoeA_N PF03453.12 gi|154150849|ref|YP_001404467.1| - 1.2e-36 125.5 0.1 9.2e-36 122.6 0.0 2.2 1 1 0 1 1 1 1 MoeA N-terminal region (domain I and II) PBP_like PF12727.2 gi|154150849|ref|YP_001404467.1| - 3.1e-34 117.6 0.0 2.7e-33 114.5 0.0 2.1 2 0 0 2 2 2 1 PBP superfamily domain MoCF_biosynth PF00994.19 gi|154150849|ref|YP_001404467.1| - 7.7e-30 103.2 0.1 1.5e-29 102.2 0.1 1.5 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.10 gi|154150849|ref|YP_001404467.1| - 3.7e-06 26.8 2.1 0.00023 21.0 0.0 3.0 3 0 0 3 3 3 1 MoeA C-terminal region (domain IV) LysR_substrate PF03466.15 gi|154150849|ref|YP_001404467.1| - 4.4e-05 22.6 0.8 0.032 13.3 0.0 3.5 2 1 1 3 3 3 1 LysR substrate binding domain SBP_bac_11 PF13531.1 gi|154150849|ref|YP_001404467.1| - 0.021 14.4 0.0 0.051 13.2 0.0 1.6 2 0 0 2 2 2 0 Bacterial extracellular solute-binding protein Aldedh PF00171.17 gi|154150850|ref|YP_001404468.1| - 7.7e-160 532.2 0.0 9.4e-160 531.9 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.9 gi|154150850|ref|YP_001404468.1| - 0.13 11.0 0.0 0.24 10.0 0.0 1.5 1 1 0 1 1 1 0 Acyl-CoA reductase (LuxC) FmdE PF02663.9 gi|154150852|ref|YP_001404470.1| - 3.8e-25 88.2 0.0 5e-25 87.8 0.0 1.2 1 0 0 1 1 1 1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon zf-dskA_traR PF01258.12 gi|154150852|ref|YP_001404470.1| - 1.2 8.9 5.5 0.58 9.9 0.5 2.8 3 1 1 4 4 4 0 Prokaryotic dksA/traR C4-type zinc finger zf-ribbon_3 PF13248.1 gi|154150852|ref|YP_001404470.1| - 1.6 8.0 7.8 0.51 9.6 3.0 2.0 2 0 0 2 2 2 0 zinc-ribbon domain Response_reg PF00072.19 gi|154150854|ref|YP_001404472.1| - 4.2e-22 78.2 0.0 7e-22 77.5 0.0 1.4 1 0 0 1 1 1 1 Response regulator receiver domain PAS_4 PF08448.5 gi|154150854|ref|YP_001404472.1| - 1.1e-05 25.4 0.0 2.5e-05 24.2 0.0 1.7 1 0 0 1 1 1 1 PAS fold PAS_8 PF13188.1 gi|154150854|ref|YP_001404472.1| - 0.0021 17.8 0.0 0.006 16.4 0.0 1.8 1 0 0 1 1 1 1 PAS domain HisKA PF00512.20 gi|154150854|ref|YP_001404472.1| - 0.018 15.0 0.0 0.079 12.9 0.0 2.2 1 1 0 1 1 1 0 His Kinase A (phospho-acceptor) domain PAS PF00989.19 gi|154150854|ref|YP_001404472.1| - 0.028 14.1 0.0 0.076 12.8 0.0 1.7 1 0 0 1 1 1 0 PAS fold AMMECR1 PF01871.12 gi|154150855|ref|YP_001404473.1| - 1.8e-57 193.2 0.0 2.1e-57 192.9 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 TGT PF01702.13 gi|154150856|ref|YP_001404474.1| - 5.9e-49 166.4 0.0 7.8e-49 166.1 0.0 1.1 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase PUA PF01472.15 gi|154150857|ref|YP_001404475.1| - 1.3e-12 47.2 0.5 2.9e-12 46.1 0.4 1.6 1 0 0 1 1 1 1 PUA domain AlaDh_PNT_C PF01262.16 gi|154150858|ref|YP_001404476.1| - 3.3e-49 166.6 1.9 3.3e-49 166.6 1.3 1.6 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain AlaDh_PNT_N PF05222.10 gi|154150858|ref|YP_001404476.1| - 2.9e-43 147.1 1.1 4e-42 143.4 0.2 2.2 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, N-terminal domain 2-Hacid_dh_C PF02826.14 gi|154150858|ref|YP_001404476.1| - 5.7e-07 28.8 0.5 0.033 13.3 0.0 2.6 3 0 0 3 3 3 2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_8 PF13450.1 gi|154150858|ref|YP_001404476.1| - 0.00027 20.9 0.6 0.013 15.4 0.5 2.5 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.9 gi|154150858|ref|YP_001404476.1| - 0.0016 16.9 0.4 0.004 15.6 0.3 1.6 1 0 0 1 1 1 1 HI0933-like protein ADH_zinc_N PF00107.21 gi|154150858|ref|YP_001404476.1| - 0.042 13.3 2.0 0.089 12.3 0.6 2.3 2 1 0 2 2 2 0 Zinc-binding dehydrogenase TusA PF01206.12 gi|154150858|ref|YP_001404476.1| - 0.087 12.4 0.0 6.8 6.3 0.0 3.0 3 0 0 3 3 3 0 Sulfurtransferase TusA Shikimate_DH PF01488.15 gi|154150858|ref|YP_001404476.1| - 0.42 10.7 4.1 1.5 8.8 0.2 2.5 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase NAD_binding_2 PF03446.10 gi|154150858|ref|YP_001404476.1| - 0.48 10.2 5.0 1.1 9.0 1.9 2.5 2 1 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase Pyr_redox_2 PF07992.9 gi|154150858|ref|YP_001404476.1| - 0.5 10.2 2.4 0.91 9.3 1.2 2.0 2 1 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase DUF3814 PF12769.2 gi|154150859|ref|YP_001404477.1| - 1.5e-31 108.4 5.6 1.7e-31 108.2 3.9 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3814) DUF485 PF04341.7 gi|154150859|ref|YP_001404477.1| - 0.0069 16.0 5.1 0.02 14.5 3.2 1.8 2 0 0 2 2 2 1 Protein of unknown function, DUF485 2HCT PF03390.10 gi|154150859|ref|YP_001404477.1| - 0.038 12.3 4.1 0.044 12.1 2.8 1.0 1 0 0 1 1 1 0 2-hydroxycarboxylate transporter family SUR7 PF06687.7 gi|154150859|ref|YP_001404477.1| - 0.063 12.8 2.5 0.08 12.4 1.8 1.1 1 0 0 1 1 1 0 SUR7/PalI family YtpI PF14007.1 gi|154150859|ref|YP_001404477.1| - 0.93 9.4 5.3 2 8.3 3.7 1.7 1 1 0 1 1 1 0 YtpI-like protein PepSY_TM_2 PF13703.1 gi|154150859|ref|YP_001404477.1| - 1.5 9.0 6.1 0.77 9.9 0.2 2.6 1 1 1 2 2 2 0 PepSY-associated TM helix RseC_MucC PF04246.7 gi|154150859|ref|YP_001404477.1| - 5.7 6.5 5.5 1.7 8.1 0.4 1.9 1 1 1 2 2 2 0 Positive regulator of sigma(E), RseC/MucC PNTB PF02233.11 gi|154150860|ref|YP_001404478.1| - 8.8e-145 483.0 21.7 1.1e-144 482.6 15.1 1.1 1 0 0 1 1 1 1 NAD(P) transhydrogenase beta subunit TPP_enzyme_M PF00205.17 gi|154150860|ref|YP_001404478.1| - 0.0049 16.6 0.4 0.019 14.7 0.2 1.9 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain MscL PF01741.13 gi|154150860|ref|YP_001404478.1| - 2.8 8.0 9.2 0.66 10.1 3.1 2.5 2 1 0 2 2 2 0 Large-conductance mechanosensitive channel, MscL VWA PF00092.23 gi|154150862|ref|YP_001404480.1| - 5.7e-06 26.1 0.0 1.2e-05 25.1 0.0 1.5 1 1 0 1 1 1 1 von Willebrand factor type A domain PP2C_2 PF13672.1 gi|154150863|ref|YP_001404481.1| - 1.6e-33 115.8 0.1 2.1e-33 115.5 0.1 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C SpoIIE PF07228.7 gi|154150863|ref|YP_001404481.1| - 1.9e-05 24.4 0.1 2.4e-05 24.1 0.1 1.2 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) Pkinase PF00069.20 gi|154150864|ref|YP_001404482.1| - 5.4e-16 58.5 0.0 4.1e-14 52.3 0.0 2.0 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.12 gi|154150864|ref|YP_001404482.1| - 0.00015 20.9 0.0 0.00085 18.4 0.0 1.9 2 0 0 2 2 2 1 Protein tyrosine kinase zf-FCS PF06467.9 gi|154150864|ref|YP_001404482.1| - 0.017 14.7 0.0 0.037 13.6 0.0 1.6 1 0 0 1 1 1 0 MYM-type Zinc finger with FCS sequence motif HEAT_2 PF13646.1 gi|154150865|ref|YP_001404483.1| - 4.9e-15 55.5 10.6 4.2e-11 42.9 1.3 3.1 1 1 1 3 3 3 2 HEAT repeats HEAT PF02985.17 gi|154150865|ref|YP_001404483.1| - 3.2e-08 32.9 3.7 0.0037 17.2 0.0 3.8 4 1 1 5 5 5 2 HEAT repeat HEAT_EZ PF13513.1 gi|154150865|ref|YP_001404483.1| - 6.3e-06 26.5 9.1 4.2e-05 23.8 0.5 3.5 3 0 0 3 3 3 2 HEAT-like repeat HEAT_PBS PF03130.11 gi|154150865|ref|YP_001404483.1| - 1.2e-05 25.2 4.7 4.2e-05 23.6 0.3 3.5 3 0 0 3 3 3 1 PBS lyase HEAT-like repeat Big_5 PF13205.1 gi|154150866|ref|YP_001404484.1| - 0.66 10.6 6.6 0.62 10.6 0.4 2.1 1 1 1 2 2 2 0 Bacterial Ig-like domain Myco_19_kDa PF05481.7 gi|154150866|ref|YP_001404484.1| - 1.4 8.6 19.2 2.6 7.8 13.3 1.5 1 1 0 1 1 1 0 Mycobacterium 19 kDa lipoprotein antigen Radical_SAM PF04055.16 gi|154150867|ref|YP_001404485.1| - 1.3e-26 93.7 0.1 2e-26 93.1 0.1 1.3 1 0 0 1 1 1 1 Radical SAM superfamily B12-binding PF02310.14 gi|154150867|ref|YP_001404485.1| - 5.7e-09 35.8 0.0 1.6e-08 34.4 0.0 1.8 1 0 0 1 1 1 1 B12 binding domain Metallophos_2 PF12850.2 gi|154150868|ref|YP_001404486.1| - 1.3e-15 57.5 0.3 1.8e-15 57.0 0.2 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos_3 PF14582.1 gi|154150868|ref|YP_001404486.1| - 9.5e-07 28.2 0.8 6.9e-05 22.1 0.2 2.9 1 1 1 2 2 2 1 Metallophosphoesterase, calcineurin superfamily Metallophos PF00149.23 gi|154150868|ref|YP_001404486.1| - 2.7e-06 26.8 3.8 8.6e-06 25.2 2.6 1.8 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase CYTH PF01928.16 gi|154150869|ref|YP_001404487.1| - 2.6e-29 102.2 0.3 2.9e-29 102.0 0.2 1.0 1 0 0 1 1 1 1 CYTH domain DUF2469 PF10611.4 gi|154150869|ref|YP_001404487.1| - 0.068 13.5 0.0 0.11 12.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2469) FKBP_C PF00254.23 gi|154150870|ref|YP_001404488.1| - 3.1e-17 62.3 0.1 7.3e-16 57.9 0.1 2.4 1 1 1 2 2 2 1 FKBP-type peptidyl-prolyl cis-trans isomerase DUF2207 PF09972.4 gi|154150870|ref|YP_001404488.1| - 0.12 10.9 0.0 0.14 10.6 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF2029 PF09594.5 gi|154150871|ref|YP_001404489.1| - 5.3e-20 71.9 16.2 5.3e-20 71.9 11.2 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF2029) eRF1_1 PF03463.10 gi|154150872|ref|YP_001404490.1| - 2.6e-31 107.9 0.0 4.4e-31 107.1 0.0 1.4 1 0 0 1 1 1 1 eRF1 domain 1 eRF1_3 PF03465.10 gi|154150872|ref|YP_001404490.1| - 8.9e-21 74.2 0.1 3.7e-20 72.2 0.1 2.1 1 1 0 1 1 1 1 eRF1 domain 3 eRF1_2 PF03464.10 gi|154150872|ref|YP_001404490.1| - 1.3e-08 35.2 0.0 2.2e-08 34.4 0.0 1.4 1 0 0 1 1 1 1 eRF1 domain 2 Ribosomal_L7Ae PF01248.21 gi|154150872|ref|YP_001404490.1| - 0.038 13.5 0.0 0.5 9.9 0.0 2.1 1 1 1 2 2 2 0 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family FbpA PF05833.6 gi|154150873|ref|YP_001404491.1| - 1.7e-61 208.1 0.0 2.3e-61 207.7 0.0 1.1 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) DUF814 PF05670.8 gi|154150873|ref|YP_001404491.1| - 3.7e-23 81.2 0.0 9.6e-23 79.8 0.0 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF814) EIAV_GP90 PF00971.13 gi|154150874|ref|YP_001404492.1| - 0.0037 15.7 0.0 0.0045 15.5 0.0 1.1 1 0 0 1 1 1 1 EIAV coat protein, gp90 FTSW_RODA_SPOVE PF01098.14 gi|154150874|ref|YP_001404492.1| - 0.011 14.5 4.1 0.013 14.3 2.8 1.0 1 0 0 1 1 1 0 Cell cycle protein DUF2614 PF11023.3 gi|154150874|ref|YP_001404492.1| - 0.079 12.7 2.0 0.12 12.1 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2614) DUF2721 PF11026.3 gi|154150874|ref|YP_001404492.1| - 0.083 12.5 0.1 0.083 12.5 0.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2721) DUF3040 PF11239.3 gi|154150874|ref|YP_001404492.1| - 0.087 12.8 0.1 0.13 12.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) DUF4234 PF14018.1 gi|154150874|ref|YP_001404492.1| - 0.15 11.8 0.3 0.15 11.8 0.2 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4234) DUF2207 PF09972.4 gi|154150874|ref|YP_001404492.1| - 0.19 10.2 1.3 0.22 10.0 0.9 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) FUSC_2 PF13515.1 gi|154150874|ref|YP_001404492.1| - 0.33 10.8 9.9 0.51 10.2 6.8 1.3 1 1 0 1 1 1 0 Fusaric acid resistance protein-like ABC_tran PF00005.22 gi|154150875|ref|YP_001404493.1| - 1.2e-41 142.1 0.0 9.5e-20 71.2 0.0 2.4 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.1 gi|154150875|ref|YP_001404493.1| - 5e-15 56.2 4.0 0.00049 20.1 0.0 4.3 2 2 1 3 3 3 3 AAA domain SMC_N PF02463.14 gi|154150875|ref|YP_001404493.1| - 8.7e-14 51.2 7.5 7.7e-05 22.0 0.0 4.0 3 1 1 4 4 4 3 RecF/RecN/SMC N terminal domain RLI PF04068.10 gi|154150875|ref|YP_001404493.1| - 2.4e-11 43.0 3.4 5.9e-11 41.7 2.3 1.7 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI Fer4 PF00037.22 gi|154150875|ref|YP_001404493.1| - 8.3e-08 31.5 3.8 8.3e-08 31.5 2.6 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_6 PF12837.2 gi|154150875|ref|YP_001404493.1| - 2.5e-05 23.9 11.7 0.00013 21.7 1.4 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain AAA_17 PF13207.1 gi|154150875|ref|YP_001404493.1| - 3.2e-05 24.7 0.8 0.026 15.3 0.0 3.0 2 2 0 2 2 2 1 AAA domain AAA_29 PF13555.1 gi|154150875|ref|YP_001404493.1| - 4.3e-05 22.9 1.9 0.05 13.1 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_22 PF13401.1 gi|154150875|ref|YP_001404493.1| - 0.0001 22.4 1.2 0.082 13.0 0.0 3.4 2 2 0 2 2 2 1 AAA domain Fer4_21 PF14697.1 gi|154150875|ref|YP_001404493.1| - 0.00018 21.2 9.3 0.00032 20.4 6.5 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain DUF258 PF03193.11 gi|154150875|ref|YP_001404493.1| - 0.0002 20.5 0.3 0.3 10.2 0.0 2.4 2 0 0 2 2 2 2 Protein of unknown function, DUF258 Fer4_7 PF12838.2 gi|154150875|ref|YP_001404493.1| - 0.00025 21.3 8.3 0.00056 20.2 5.8 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain RNA_helicase PF00910.17 gi|154150875|ref|YP_001404493.1| - 0.00031 20.8 0.1 0.63 10.2 0.0 2.7 2 0 0 2 2 2 2 RNA helicase SbcCD_C PF13558.1 gi|154150875|ref|YP_001404493.1| - 0.00088 19.1 0.0 1.1 9.2 0.0 2.9 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit Miro PF08477.8 gi|154150875|ref|YP_001404493.1| - 0.00095 19.6 0.7 0.15 12.5 0.0 2.7 3 0 0 3 3 2 1 Miro-like protein AAA_16 PF13191.1 gi|154150875|ref|YP_001404493.1| - 0.0013 18.7 3.2 0.31 10.9 0.1 2.8 2 2 0 2 2 2 2 AAA ATPase domain AAA_25 PF13481.1 gi|154150875|ref|YP_001404493.1| - 0.0015 17.9 5.8 0.35 10.2 0.0 3.8 4 0 0 4 4 4 1 AAA domain AAA_15 PF13175.1 gi|154150875|ref|YP_001404493.1| - 0.0024 17.0 0.2 0.5 9.3 0.0 2.8 2 1 0 3 3 3 1 AAA ATPase domain Fer4_9 PF13187.1 gi|154150875|ref|YP_001404493.1| - 0.0037 17.4 8.4 0.0083 16.3 5.8 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain AAA_18 PF13238.1 gi|154150875|ref|YP_001404493.1| - 0.0041 17.4 0.7 3 8.1 0.0 3.3 3 1 0 3 3 2 1 AAA domain Fer4_2 PF12797.2 gi|154150875|ref|YP_001404493.1| - 0.0042 16.9 2.1 0.0042 16.9 1.4 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_10 PF13237.1 gi|154150875|ref|YP_001404493.1| - 0.0049 16.6 1.2 0.0049 16.6 0.8 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain AAA_13 PF13166.1 gi|154150875|ref|YP_001404493.1| - 0.0051 15.3 0.1 0.26 9.7 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_14 PF13173.1 gi|154150875|ref|YP_001404493.1| - 0.0089 15.9 0.3 5.3 6.9 0.0 3.2 3 0 0 3 3 3 0 AAA domain NACHT PF05729.7 gi|154150875|ref|YP_001404493.1| - 0.011 15.3 0.2 1.2 8.8 0.0 2.5 2 0 0 2 2 2 0 NACHT domain AAA_33 PF13671.1 gi|154150875|ref|YP_001404493.1| - 0.015 15.1 1.5 0.94 9.3 0.2 3.3 3 1 0 3 3 3 0 AAA domain Fer4_16 PF13484.1 gi|154150875|ref|YP_001404493.1| - 0.018 15.7 0.2 0.018 15.7 0.1 2.3 2 0 0 2 2 1 0 4Fe-4S double cluster binding domain AAA_28 PF13521.1 gi|154150875|ref|YP_001404493.1| - 0.019 14.9 0.2 6.5 6.6 0.0 2.7 2 0 0 2 2 2 0 AAA domain AAA PF00004.24 gi|154150875|ref|YP_001404493.1| - 0.026 14.7 0.6 10 6.3 0.0 2.7 3 0 0 3 3 2 0 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.17 gi|154150875|ref|YP_001404493.1| - 0.033 13.0 0.0 5.5 5.7 0.0 2.2 2 0 0 2 2 2 0 NB-ARC domain Fer4_3 PF12798.2 gi|154150875|ref|YP_001404493.1| - 0.041 14.4 4.2 0.041 14.4 2.9 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain AAA_10 PF12846.2 gi|154150875|ref|YP_001404493.1| - 0.051 13.0 0.8 5 6.4 0.2 2.3 2 0 0 2 2 2 0 AAA-like domain Fer4_11 PF13247.1 gi|154150875|ref|YP_001404493.1| - 0.081 12.8 2.0 0.16 11.8 1.4 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|154150875|ref|YP_001404493.1| - 0.11 12.5 3.8 0.27 11.2 2.7 1.6 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|154150875|ref|YP_001404493.1| - 0.46 10.9 11.8 0.19 12.1 1.6 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.1 gi|154150875|ref|YP_001404493.1| - 0.52 10.7 8.2 0.12 12.8 2.2 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain DUF87 PF01935.12 gi|154150875|ref|YP_001404493.1| - 0.84 9.4 10.9 3 7.5 0.3 3.3 4 0 0 4 4 3 0 Domain of unknown function DUF87 AAA_23 PF13476.1 gi|154150875|ref|YP_001404493.1| - 0.95 9.7 5.5 11 6.3 1.0 2.5 2 1 0 2 2 2 0 AAA domain ArgK PF03308.11 gi|154150875|ref|YP_001404493.1| - 4.9 5.8 7.6 5.8 5.6 0.2 2.5 3 0 0 3 3 2 0 ArgK protein Fer4_17 PF13534.1 gi|154150875|ref|YP_001404493.1| - 6 7.3 8.3 1.2 9.5 1.2 2.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain Reg_prop PF07494.6 gi|154150876|ref|YP_001404494.1| - 1.1e-10 40.2 2.1 0.00076 19.1 0.1 5.1 5 0 0 5 5 5 3 Two component regulator propeller SGL PF08450.7 gi|154150876|ref|YP_001404494.1| - 0.0038 16.6 0.1 0.18 11.1 0.0 2.7 2 1 0 2 2 2 1 SMP-30/Gluconolaconase/LRE-like region CheD PF03975.8 gi|154150877|ref|YP_001404495.1| - 7.5e-32 109.4 0.0 8.6e-32 109.2 0.0 1.0 1 0 0 1 1 1 1 CheD chemotactic sensory transduction CheC PF04509.7 gi|154150878|ref|YP_001404496.1| - 3.9e-22 77.6 3.8 6.1e-11 41.8 0.1 2.4 2 0 0 2 2 2 2 CheC-like family CheX PF13690.1 gi|154150878|ref|YP_001404496.1| - 2.6e-07 30.4 1.3 0.00029 20.6 0.0 2.8 2 1 2 4 4 4 2 Chemotaxis phosphatase CheX HATPase_c PF02518.21 gi|154150879|ref|YP_001404497.1| - 1.4e-20 73.0 0.3 6.1e-20 70.9 0.0 2.1 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase P2 PF07194.6 gi|154150879|ref|YP_001404497.1| - 2.3e-20 72.2 0.0 8e-20 70.4 0.0 2.0 1 0 0 1 1 1 1 P2 response regulator binding domain CheW PF01584.14 gi|154150879|ref|YP_001404497.1| - 1.1e-19 70.3 1.5 2.2e-19 69.2 1.0 1.6 1 0 0 1 1 1 1 CheW-like domain Hpt PF01627.18 gi|154150879|ref|YP_001404497.1| - 1.9e-19 69.4 2.2 3e-19 68.7 0.9 1.9 2 0 0 2 2 2 1 Hpt domain H-kinase_dim PF02895.9 gi|154150879|ref|YP_001404497.1| - 1.4e-12 47.7 5.3 1.4e-12 47.7 3.7 2.1 2 0 0 2 2 2 1 Signal transducing histidine kinase, homodimeric domain HATPase_c_3 PF13589.1 gi|154150879|ref|YP_001404497.1| - 0.031 13.9 0.1 0.13 11.9 0.1 1.9 1 1 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CheB_methylest PF01339.12 gi|154150880|ref|YP_001404498.1| - 1.5e-61 206.9 1.3 3.6e-59 199.2 0.8 2.3 2 0 0 2 2 2 2 CheB methylesterase Response_reg PF00072.19 gi|154150880|ref|YP_001404498.1| - 8.4e-27 93.3 0.2 1.8e-26 92.3 0.2 1.6 1 0 0 1 1 1 1 Response regulator receiver domain DUF3798 PF12683.2 gi|154150880|ref|YP_001404498.1| - 0.051 12.6 0.0 0.086 11.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3798) Abhydrolase_5 PF12695.2 gi|154150880|ref|YP_001404498.1| - 0.11 12.2 0.3 0.18 11.5 0.2 1.5 1 1 0 1 1 1 0 Alpha/beta hydrolase family Response_reg PF00072.19 gi|154150881|ref|YP_001404499.1| - 1.5e-29 102.2 0.1 1.7e-29 102.1 0.1 1.0 1 0 0 1 1 1 1 Response regulator receiver domain CoA_binding_2 PF13380.1 gi|154150881|ref|YP_001404499.1| - 0.042 14.0 0.2 0.064 13.4 0.1 1.3 1 1 0 1 1 1 0 CoA binding domain CheF-arch PF04283.7 gi|154150882|ref|YP_001404500.1| - 1.9e-25 89.4 0.1 2.3e-24 85.8 0.1 2.1 1 1 0 1 1 1 1 Chemotaxis signal transduction system protein F from archaea DUF2666 PF10869.3 gi|154150883|ref|YP_001404501.1| - 0.12 12.4 0.1 0.19 11.7 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2666) T2SF PF00482.18 gi|154150884|ref|YP_001404502.1| - 2.3e-06 27.5 0.4 2.3e-06 27.5 0.3 3.9 4 0 0 4 4 4 1 Type II secretion system (T2SS), protein F FMN_bind_2 PF04299.7 gi|154150884|ref|YP_001404502.1| - 0.0081 15.6 0.0 0.017 14.6 0.0 1.5 1 0 0 1 1 1 1 Putative FMN-binding domain T2SE PF00437.15 gi|154150885|ref|YP_001404503.1| - 2.9e-45 154.2 0.0 4.5e-45 153.6 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.1 gi|154150885|ref|YP_001404503.1| - 0.00035 20.0 0.0 0.00084 18.8 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_tran PF00005.22 gi|154150885|ref|YP_001404503.1| - 0.00054 20.2 0.0 0.0013 18.9 0.0 1.6 1 0 0 1 1 1 1 ABC transporter PIF1 PF05970.9 gi|154150885|ref|YP_001404503.1| - 0.0089 15.0 0.0 0.027 13.4 0.0 1.7 2 0 0 2 2 2 1 PIF1-like helicase AAA_23 PF13476.1 gi|154150885|ref|YP_001404503.1| - 0.036 14.3 0.5 0.089 13.1 0.3 1.6 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.18 gi|154150885|ref|YP_001404503.1| - 0.038 13.9 0.0 0.085 12.8 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_16 PF13191.1 gi|154150885|ref|YP_001404503.1| - 0.089 12.7 0.0 0.19 11.6 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain KaiC PF06745.8 gi|154150886|ref|YP_001404504.1| - 2.1e-25 89.2 0.3 2.5e-25 88.9 0.2 1.0 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.1 gi|154150886|ref|YP_001404504.1| - 8.6e-09 35.0 0.0 1.3e-08 34.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain PAXNEB PF05625.6 gi|154150886|ref|YP_001404504.1| - 2.3e-08 33.2 1.0 1.1e-05 24.4 0.1 2.2 2 0 0 2 2 2 2 PAXNEB protein Rad51 PF08423.6 gi|154150886|ref|YP_001404504.1| - 0.0016 17.4 0.1 0.0031 16.4 0.0 1.4 2 0 0 2 2 2 1 Rad51 RecA PF00154.16 gi|154150886|ref|YP_001404504.1| - 0.018 14.1 0.1 0.027 13.5 0.0 1.3 1 0 0 1 1 1 0 recA bacterial DNA recombination protein DUF835 PF05763.7 gi|154150886|ref|YP_001404504.1| - 0.034 13.7 0.1 0.067 12.7 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF835) AAA_15 PF13175.1 gi|154150886|ref|YP_001404504.1| - 0.056 12.4 0.1 0.065 12.2 0.0 1.2 1 0 0 1 1 1 0 AAA ATPase domain Arch_flagellin PF01917.11 gi|154150887|ref|YP_001404505.1| - 8.7e-08 32.0 7.3 1.4e-07 31.3 5.0 1.3 1 1 0 1 1 1 1 Archaebacterial flagellin CARDB PF07705.6 gi|154150887|ref|YP_001404505.1| - 0.023 14.7 0.4 0.041 13.9 0.2 1.6 1 1 0 1 1 1 0 CARDB DUF4352 PF11611.3 gi|154150887|ref|YP_001404505.1| - 0.05 13.7 0.1 0.072 13.2 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4352) DUF1628 PF07790.6 gi|154150887|ref|YP_001404505.1| - 5 7.9 7.0 11 6.8 4.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1628) Arch_flagellin PF01917.11 gi|154150888|ref|YP_001404506.1| - 1.4e-10 41.1 4.3 7.5e-10 38.7 3.0 1.8 1 1 0 1 1 1 1 Archaebacterial flagellin Arch_fla_DE PF04659.8 gi|154150889|ref|YP_001404507.1| - 0.011 15.5 0.0 0.025 14.3 0.0 1.6 1 0 0 1 1 1 0 Archaeal flagella protein Arch_flagellin PF01917.11 gi|154150890|ref|YP_001404508.1| - 2.5e-29 102.2 4.6 3.2e-29 101.8 3.2 1.2 1 0 0 1 1 1 1 Archaebacterial flagellin Arch_flagellin PF01917.11 gi|154150891|ref|YP_001404509.1| - 1.2e-30 106.5 4.2 1.5e-30 106.2 2.9 1.1 1 0 0 1 1 1 1 Archaebacterial flagellin eIF-5a PF01287.15 gi|154150893|ref|YP_001404511.1| - 9.8e-11 41.4 0.4 1.6e-10 40.7 0.3 1.3 1 0 0 1 1 1 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold EFP_N PF08207.7 gi|154150893|ref|YP_001404511.1| - 0.00061 19.5 0.0 0.0031 17.3 0.0 1.9 2 0 0 2 2 2 1 Elongation factor P (EF-P) KOW-like domain BRK PF07533.11 gi|154150893|ref|YP_001404511.1| - 0.035 13.5 0.0 0.082 12.3 0.0 1.6 1 0 0 1 1 1 0 BRK domain Inositol_P PF00459.20 gi|154150894|ref|YP_001404512.1| - 1e-32 113.5 0.0 1.2e-32 113.2 0.0 1.1 1 0 0 1 1 1 1 Inositol monophosphatase family FBPase PF00316.15 gi|154150894|ref|YP_001404512.1| - 0.0037 16.1 0.0 0.0056 15.5 0.0 1.2 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase NAD_kinase PF01513.16 gi|154150895|ref|YP_001404513.1| - 1.9e-56 190.9 0.0 2.2e-56 190.7 0.0 1.1 1 0 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.19 gi|154150895|ref|YP_001404513.1| - 0.13 11.7 0.1 0.23 10.8 0.1 1.4 1 0 0 1 1 1 0 Diacylglycerol kinase catalytic domain ACT PF01842.20 gi|154150896|ref|YP_001404514.1| - 6.3e-05 22.3 0.3 0.00028 20.3 0.0 1.9 2 0 0 2 2 2 1 ACT domain Saccharop_dh_N PF04455.7 gi|154150896|ref|YP_001404514.1| - 0.00044 20.3 0.3 0.0021 18.1 0.1 1.9 2 0 0 2 2 2 1 LOR/SDH bifunctional enzyme conserved region T2SM_b PF10741.4 gi|154150896|ref|YP_001404514.1| - 0.054 13.1 0.2 0.16 11.6 0.0 1.7 2 0 0 2 2 2 0 Type II secretion system (T2SS), protein M subtype b Homoserine_dh PF00742.14 gi|154150897|ref|YP_001404515.1| - 3.3e-55 186.5 0.1 5.6e-55 185.7 0.1 1.4 1 0 0 1 1 1 1 Homoserine dehydrogenase NAD_binding_3 PF03447.11 gi|154150897|ref|YP_001404515.1| - 7.1e-10 39.3 0.1 1.4e-09 38.3 0.1 1.5 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain ELFV_dehydrog PF00208.16 gi|154150897|ref|YP_001404515.1| - 0.018 14.6 0.1 0.033 13.7 0.1 1.4 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase UDPG_MGDP_dh_N PF03721.9 gi|154150897|ref|YP_001404515.1| - 0.11 11.8 0.3 0.3 10.4 0.1 1.8 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HTH_IclR PF09339.5 gi|154150898|ref|YP_001404516.1| - 3.4e-06 26.5 0.5 0.0003 20.2 0.0 2.7 2 0 0 2 2 2 1 IclR helix-turn-helix domain TrmB PF01978.14 gi|154150898|ref|YP_001404516.1| - 1.9e-05 24.2 0.0 4.2e-05 23.1 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_42 PF06224.7 gi|154150898|ref|YP_001404516.1| - 0.0099 15.2 0.3 0.017 14.4 0.2 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_23 PF13384.1 gi|154150898|ref|YP_001404516.1| - 0.034 13.8 0.1 0.29 10.8 0.0 2.6 3 0 0 3 3 3 0 Homeodomain-like domain HTH_43 PF09904.4 gi|154150898|ref|YP_001404516.1| - 0.064 13.0 0.0 0.12 12.2 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix Fe_dep_repress PF01325.14 gi|154150898|ref|YP_001404516.1| - 0.072 13.0 0.0 0.15 11.9 0.0 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain MarR_2 PF12802.2 gi|154150898|ref|YP_001404516.1| - 0.1 12.2 0.0 0.25 11.0 0.0 1.6 1 0 0 1 1 1 0 MarR family HTH_26 PF13443.1 gi|154150898|ref|YP_001404516.1| - 0.12 12.5 0.0 0.31 11.2 0.0 1.7 2 0 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain GATase PF00117.23 gi|154150899|ref|YP_001404517.1| - 1.1e-19 70.6 0.0 1.4e-19 70.2 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.8 gi|154150899|ref|YP_001404517.1| - 1.9e-07 30.7 0.0 3.7e-07 29.8 0.0 1.6 1 1 0 1 1 1 1 Peptidase C26 GATase_3 PF07685.9 gi|154150899|ref|YP_001404517.1| - 0.072 12.6 0.0 0.11 12.0 0.0 1.3 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain DUF1628 PF07790.6 gi|154150900|ref|YP_001404518.1| - 1.2e-10 41.9 8.2 2e-10 41.2 5.7 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1628) Na_H_antiport_2 PF13726.1 gi|154150900|ref|YP_001404518.1| - 0.081 12.8 5.3 0.13 12.1 3.6 1.3 1 0 0 1 1 1 0 Na+-H+ antiporter family Coa1 PF08695.5 gi|154150900|ref|YP_001404518.1| - 0.091 12.2 0.3 0.14 11.6 0.2 1.3 1 0 0 1 1 1 0 Cytochrome oxidase complex assembly protein 1 DUF4307 PF14155.1 gi|154150900|ref|YP_001404518.1| - 0.29 10.9 3.8 0.51 10.1 2.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4307) Response_reg PF00072.19 gi|154150901|ref|YP_001404519.1| - 9.4e-22 77.1 0.0 2.1e-21 76.0 0.0 1.6 1 0 0 1 1 1 1 Response regulator receiver domain TPR_11 PF13414.1 gi|154150901|ref|YP_001404519.1| - 3.9e-21 74.4 0.2 1e-15 57.1 0.0 2.4 1 1 1 2 2 2 2 TPR repeat TPR_12 PF13424.1 gi|154150901|ref|YP_001404519.1| - 6.9e-21 73.9 0.1 1.2e-10 41.1 0.0 2.6 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.23 gi|154150901|ref|YP_001404519.1| - 9.7e-20 69.2 0.1 1.2e-09 37.3 0.0 4.1 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_2 PF07719.12 gi|154150901|ref|YP_001404519.1| - 3.6e-18 63.9 0.5 1.5e-08 33.8 0.0 3.8 4 0 0 4 4 3 3 Tetratricopeptide repeat TPR_16 PF13432.1 gi|154150901|ref|YP_001404519.1| - 2.6e-14 53.4 0.1 1.2e-08 35.4 0.0 2.8 2 1 1 3 3 2 2 Tetratricopeptide repeat TPR_17 PF13431.1 gi|154150901|ref|YP_001404519.1| - 5.7e-14 51.0 0.0 3.2e-05 23.7 0.0 3.5 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.1 gi|154150901|ref|YP_001404519.1| - 8.2e-14 50.2 0.1 1.7e-05 24.2 0.0 3.6 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_14 PF13428.1 gi|154150901|ref|YP_001404519.1| - 1.5e-08 34.5 0.1 0.00098 19.5 0.0 3.8 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_6 PF13174.1 gi|154150901|ref|YP_001404519.1| - 1.5e-07 31.4 0.0 0.013 15.9 0.0 4.0 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_7 PF13176.1 gi|154150901|ref|YP_001404519.1| - 1.6e-07 30.5 0.1 0.0048 16.5 0.0 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.1 gi|154150901|ref|YP_001404519.1| - 1.1e-06 28.9 0.0 0.003 17.8 0.0 2.6 1 1 1 2 2 2 2 Tetratricopeptide repeat PAS PF00989.19 gi|154150901|ref|YP_001404519.1| - 2.9e-06 27.0 0.1 9.9e-06 25.3 0.0 1.9 1 1 0 1 1 1 1 PAS fold Apc3 PF12895.2 gi|154150901|ref|YP_001404519.1| - 1.5e-05 25.0 0.0 0.0059 16.7 0.0 2.0 1 1 1 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 PAS_9 PF13426.1 gi|154150901|ref|YP_001404519.1| - 2.2e-05 24.7 0.0 3.9e-05 23.9 0.0 1.4 1 0 0 1 1 1 1 PAS domain TPR_10 PF13374.1 gi|154150901|ref|YP_001404519.1| - 3.6e-05 23.5 0.1 0.54 10.2 0.0 3.8 3 0 0 3 3 3 1 Tetratricopeptide repeat PAS_8 PF13188.1 gi|154150901|ref|YP_001404519.1| - 7.5e-05 22.4 0.1 0.00053 19.7 0.0 2.3 2 0 0 2 2 2 1 PAS domain TPR_9 PF13371.1 gi|154150901|ref|YP_001404519.1| - 0.0025 17.6 0.0 0.019 14.8 0.0 2.3 1 1 1 2 2 2 1 Tetratricopeptide repeat SHNi-TPR PF10516.4 gi|154150901|ref|YP_001404519.1| - 0.0026 16.9 0.0 0.0026 16.9 0.0 2.1 3 0 0 3 3 2 1 SHNi-TPR DUF3856 PF12968.2 gi|154150901|ref|YP_001404519.1| - 0.0068 16.2 0.3 0.82 9.4 0.0 2.7 1 1 2 3 3 3 1 Domain of Unknown Function (DUF3856) PAS_4 PF08448.5 gi|154150901|ref|YP_001404519.1| - 0.0071 16.3 0.0 0.027 14.5 0.0 1.9 1 1 0 1 1 1 1 PAS fold NARP1 PF12569.3 gi|154150901|ref|YP_001404519.1| - 0.029 13.1 0.2 0.075 11.7 0.2 1.7 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 LXG PF04740.7 gi|154150901|ref|YP_001404519.1| - 0.032 14.0 0.2 0.062 13.0 0.1 1.4 1 0 0 1 1 1 0 LXG domain of WXG superfamily DUF1250 PF06855.7 gi|154150901|ref|YP_001404519.1| - 0.032 13.7 0.1 0.12 11.9 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1250) TPR_21 PF09976.4 gi|154150901|ref|YP_001404519.1| - 0.053 13.4 0.2 0.48 10.3 0.1 2.1 1 1 1 2 2 2 0 Tetratricopeptide repeat HDOD PF08668.7 gi|154150901|ref|YP_001404519.1| - 0.066 12.4 0.0 0.12 11.6 0.0 1.3 1 0 0 1 1 1 0 HDOD domain FAT PF02259.18 gi|154150901|ref|YP_001404519.1| - 0.073 12.0 0.1 0.14 11.0 0.0 1.4 1 1 0 1 1 1 0 FAT domain TPR_15 PF13429.1 gi|154150901|ref|YP_001404519.1| - 0.088 11.8 0.1 0.15 11.0 0.1 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat PAS_9 PF13426.1 gi|154150902|ref|YP_001404520.1| - 2.7e-34 117.6 0.0 3.1e-10 40.3 0.0 3.8 4 0 0 4 4 3 3 PAS domain PAS_4 PF08448.5 gi|154150902|ref|YP_001404520.1| - 4.9e-30 103.7 0.0 1.1e-15 57.6 0.0 3.5 3 0 0 3 3 3 2 PAS fold HisKA_2 PF07568.7 gi|154150902|ref|YP_001404520.1| - 1.8e-24 85.3 2.5 6.3e-24 83.6 1.8 2.0 1 0 0 1 1 1 1 Histidine kinase PAS PF00989.19 gi|154150902|ref|YP_001404520.1| - 2.6e-16 59.3 0.0 0.00016 21.4 0.0 3.8 3 1 0 3 3 3 3 PAS fold PAS_3 PF08447.6 gi|154150902|ref|YP_001404520.1| - 4.9e-10 39.3 0.0 1.3e-08 34.8 0.0 3.1 3 0 0 3 3 3 1 PAS fold HATPase_c PF02518.21 gi|154150902|ref|YP_001404520.1| - 7.4e-09 35.3 0.0 3e-08 33.3 0.0 2.0 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.1 gi|154150902|ref|YP_001404520.1| - 4.3e-08 32.7 0.0 0.00034 20.3 0.0 2.7 2 0 0 2 2 2 2 PAS domain HATPase_c_2 PF13581.1 gi|154150902|ref|YP_001404520.1| - 0.00021 21.0 0.0 0.00052 19.8 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_11 PF14598.1 gi|154150902|ref|YP_001404520.1| - 0.00048 20.0 0.0 0.0047 16.8 0.0 2.6 1 1 1 2 2 2 1 PAS domain HWE_HK PF07536.9 gi|154150902|ref|YP_001404520.1| - 0.00063 20.1 2.1 0.0012 19.2 0.0 2.3 2 0 0 2 2 2 1 HWE histidine kinase HOOK PF05622.7 gi|154150902|ref|YP_001404520.1| - 0.0057 14.5 0.1 0.012 13.4 0.1 1.4 1 0 0 1 1 1 1 HOOK protein HATPase_c_3 PF13589.1 gi|154150902|ref|YP_001404520.1| - 0.0062 16.1 0.0 0.017 14.7 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF4140 PF13600.1 gi|154150902|ref|YP_001404520.1| - 0.011 16.1 0.3 0.011 16.1 0.2 2.4 3 0 0 3 3 2 0 N-terminal domain of unknown function (DUF4140) PAS_10 PF13596.1 gi|154150902|ref|YP_001404520.1| - 0.016 15.4 0.0 0.067 13.4 0.0 2.1 2 0 0 2 2 2 0 PAS domain CENP-Q PF13094.1 gi|154150902|ref|YP_001404520.1| - 0.02 14.8 1.8 0.02 14.8 1.2 2.4 3 0 0 3 3 3 0 CENP-Q, a CENPA-CAD centromere complex subunit V-ATPase_C PF03223.10 gi|154150902|ref|YP_001404520.1| - 0.12 11.2 0.4 0.4 9.5 0.0 1.8 2 0 0 2 2 2 0 V-ATPase subunit C DUF4201 PF13870.1 gi|154150902|ref|YP_001404520.1| - 1.1 8.6 8.6 3.4 7.0 1.6 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF4201) HisKA_2 PF07568.7 gi|154150903|ref|YP_001404521.1| - 4.9e-23 80.7 1.0 4.9e-23 80.7 0.7 2.3 2 0 0 2 2 2 1 Histidine kinase Response_reg PF00072.19 gi|154150903|ref|YP_001404521.1| - 1.7e-20 73.1 0.0 6.5e-19 67.9 0.0 2.4 2 0 0 2 2 2 1 Response regulator receiver domain PAS_9 PF13426.1 gi|154150903|ref|YP_001404521.1| - 4.7e-12 46.2 0.0 4.3e-11 43.1 0.0 2.6 2 1 0 2 2 2 1 PAS domain PAS PF00989.19 gi|154150903|ref|YP_001404521.1| - 1.5e-11 44.1 0.1 3.8e-11 42.7 0.1 1.8 1 0 0 1 1 1 1 PAS fold PAS_4 PF08448.5 gi|154150903|ref|YP_001404521.1| - 7.5e-10 38.8 0.1 1.7e-09 37.6 0.1 1.7 1 0 0 1 1 1 1 PAS fold PAS_3 PF08447.6 gi|154150903|ref|YP_001404521.1| - 4.3e-09 36.3 0.0 1.1e-08 35.0 0.0 1.8 2 0 0 2 2 2 1 PAS fold HATPase_c PF02518.21 gi|154150903|ref|YP_001404521.1| - 1.6e-07 31.0 0.0 5.1e-07 29.3 0.0 1.9 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.1 gi|154150903|ref|YP_001404521.1| - 1.2e-05 24.9 0.1 4e-05 23.3 0.0 1.9 1 0 0 1 1 1 1 PAS domain HATPase_c_2 PF13581.1 gi|154150903|ref|YP_001404521.1| - 4.3e-05 23.2 0.0 0.00015 21.5 0.0 1.9 2 0 0 2 2 2 1 Histidine kinase-like ATPase domain HWE_HK PF07536.9 gi|154150903|ref|YP_001404521.1| - 0.00092 19.5 0.0 0.0023 18.3 0.0 1.7 1 0 0 1 1 1 1 HWE histidine kinase Methyltransf_19 PF04672.7 gi|154150903|ref|YP_001404521.1| - 0.062 12.5 0.0 0.11 11.8 0.0 1.3 1 0 0 1 1 1 0 S-adenosyl methyltransferase HATPase_c_3 PF13589.1 gi|154150903|ref|YP_001404521.1| - 0.065 12.8 0.0 0.13 11.8 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HTH_11 PF08279.7 gi|154150905|ref|YP_001404523.1| - 0.00069 19.2 0.1 0.0019 17.7 0.1 1.7 1 0 0 1 1 1 1 HTH domain HTH_24 PF13412.1 gi|154150905|ref|YP_001404523.1| - 0.001 18.3 0.1 0.0026 17.1 0.1 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.5 gi|154150905|ref|YP_001404523.1| - 0.0034 16.9 0.1 0.0076 15.8 0.1 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_10 PF04967.7 gi|154150905|ref|YP_001404523.1| - 0.0069 15.9 0.0 0.014 14.9 0.0 1.5 1 0 0 1 1 1 1 HTH DNA binding domain HTH_3 PF01381.17 gi|154150905|ref|YP_001404523.1| - 0.016 15.0 0.2 0.084 12.7 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix PAS_9 PF13426.1 gi|154150905|ref|YP_001404523.1| - 0.018 15.3 0.0 0.038 14.3 0.0 1.5 1 0 0 1 1 1 0 PAS domain HTH_26 PF13443.1 gi|154150905|ref|YP_001404523.1| - 0.021 15.0 0.0 0.058 13.5 0.0 1.8 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain HTH_20 PF12840.2 gi|154150905|ref|YP_001404523.1| - 0.025 14.3 0.0 0.064 13.0 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain FeoC PF09012.5 gi|154150905|ref|YP_001404523.1| - 0.028 14.1 0.0 0.069 12.8 0.0 1.6 1 0 0 1 1 1 0 FeoC like transcriptional regulator GAF_3 PF13492.1 gi|154150905|ref|YP_001404523.1| - 0.038 14.0 0.0 0.12 12.4 0.0 1.9 2 0 0 2 2 2 0 GAF domain Rrf2 PF02082.15 gi|154150905|ref|YP_001404523.1| - 0.05 13.7 0.0 0.11 12.6 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator Sulfolobus_pRN PF05584.6 gi|154150905|ref|YP_001404523.1| - 0.072 13.0 0.0 0.17 11.8 0.0 1.6 1 0 0 1 1 1 0 Sulfolobus plasmid regulatory protein DUF977 PF06163.6 gi|154150905|ref|YP_001404523.1| - 0.096 12.4 0.0 0.19 11.4 0.0 1.4 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF977) HTH_psq PF05225.11 gi|154150905|ref|YP_001404523.1| - 0.098 12.2 0.2 0.19 11.3 0.1 1.4 1 0 0 1 1 1 0 helix-turn-helix, Psq domain MarR_2 PF12802.2 gi|154150905|ref|YP_001404523.1| - 0.11 12.1 0.0 0.29 10.8 0.0 1.6 1 0 0 1 1 1 0 MarR family TrmB PF01978.14 gi|154150905|ref|YP_001404523.1| - 0.12 12.1 0.0 0.24 11.1 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB NUMOD1 PF07453.8 gi|154150905|ref|YP_001404523.1| - 0.13 12.1 0.1 0.25 11.2 0.1 1.5 1 0 0 1 1 1 0 NUMOD1 domain DUF4389 PF14333.1 gi|154150906|ref|YP_001404524.1| - 0.18 11.4 0.1 0.18 11.4 0.0 3.7 3 1 1 4 4 4 0 Domain of unknown function (DUF4389) zf-ribbon_3 PF13248.1 gi|154150907|ref|YP_001404525.1| - 0.01 15.0 4.7 0.21 10.8 3.3 2.3 1 1 1 2 2 2 0 zinc-ribbon domain DZR PF12773.2 gi|154150907|ref|YP_001404525.1| - 0.014 15.2 0.7 0.026 14.3 0.5 1.3 1 0 0 1 1 1 0 Double zinc ribbon zinc_ribbon_2 PF13240.1 gi|154150907|ref|YP_001404525.1| - 0.015 14.8 7.0 0.92 9.0 0.7 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zf-Mss51 PF13824.1 gi|154150907|ref|YP_001404525.1| - 0.09 12.6 0.7 0.16 11.8 0.5 1.4 1 0 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-C2HC_2 PF13913.1 gi|154150907|ref|YP_001404525.1| - 0.11 12.2 4.1 0.55 9.9 0.1 2.5 2 0 0 2 2 2 0 zinc-finger of a C2HC-type DUF4131 PF13567.1 gi|154150907|ref|YP_001404525.1| - 0.17 11.3 13.1 6.1 6.2 4.2 2.8 2 1 1 3 3 3 0 Domain of unknown function (DUF4131) zinc_ribbon_5 PF13719.1 gi|154150907|ref|YP_001404525.1| - 0.17 11.4 1.9 7.9 6.1 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain DUF35_N PF12172.3 gi|154150907|ref|YP_001404525.1| - 0.38 10.7 2.3 0.73 9.8 1.3 1.7 2 0 0 2 2 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Zn_Tnp_IS1595 PF12760.2 gi|154150907|ref|YP_001404525.1| - 0.39 10.5 4.9 5.2 6.9 0.1 2.4 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Lar_restr_allev PF14354.1 gi|154150907|ref|YP_001404525.1| - 0.58 10.5 3.6 5.5 7.3 0.0 2.3 1 1 1 2 2 2 0 Restriction alleviation protein Lar zinc_ribbon_4 PF13717.1 gi|154150907|ref|YP_001404525.1| - 0.6 9.8 3.1 15 5.4 0.3 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-ISL3 PF14690.1 gi|154150907|ref|YP_001404525.1| - 1.5 8.8 7.5 4.9 7.2 0.4 2.4 1 1 1 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf-Di19 PF05605.7 gi|154150907|ref|YP_001404525.1| - 2.6 8.2 5.4 14 5.9 0.5 2.3 1 1 1 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding Cys_rich_CPXG PF14255.1 gi|154150907|ref|YP_001404525.1| - 2.8 7.8 7.3 5.6 6.8 0.4 2.3 1 1 1 2 2 2 0 Cysteine-rich CPXCG K_trans PF02705.11 gi|154150908|ref|YP_001404526.1| - 2.6e-159 531.0 37.2 3e-159 530.8 25.8 1.0 1 0 0 1 1 1 1 K+ potassium transporter UPF0118 PF01594.11 gi|154150909|ref|YP_001404527.1| - 4.8e-29 101.3 47.1 5.9e-29 101.0 32.6 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF20 TrkH PF02386.11 gi|154150910|ref|YP_001404528.1| - 3.9e-40 137.5 21.6 3.9e-40 137.5 15.0 2.1 1 1 1 2 2 2 2 Cation transport protein DUF4445 PF14574.1 gi|154150911|ref|YP_001404529.1| - 3e-132 440.7 1.1 3.6e-132 440.5 0.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4445) Fer2 PF00111.22 gi|154150911|ref|YP_001404529.1| - 8.1e-09 35.1 1.2 1.7e-08 34.1 0.8 1.5 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain HTH_Tnp_IS1 PF12759.2 gi|154150911|ref|YP_001404529.1| - 0.87 9.0 2.9 14 5.2 0.0 2.7 2 0 0 2 2 2 0 InsA C-terminal domain CdhD PF03599.11 gi|154150912|ref|YP_001404530.1| - 5.3e-125 416.8 0.0 6.3e-125 416.6 0.0 1.0 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase delta subunit FeS PF04060.8 gi|154150912|ref|YP_001404530.1| - 6.3e-14 51.2 1.4 1.1e-13 50.4 1.0 1.4 1 0 0 1 1 1 1 Putative Fe-S cluster CdhD PF03599.11 gi|154150913|ref|YP_001404531.1| - 1.5e-55 188.3 0.1 8.6e-55 185.7 0.1 1.9 1 1 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase delta subunit CdhC PF03598.10 gi|154150914|ref|YP_001404532.1| - 6.6e-179 594.6 0.0 8.1e-179 594.3 0.0 1.0 1 0 0 1 1 1 1 CO dehydrogenase/acetyl-CoA synthase complex beta subunit DUF1122 PF06557.6 gi|154150914|ref|YP_001404532.1| - 0.083 12.0 0.1 0.18 10.9 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1122) CO_dh PF02552.11 gi|154150915|ref|YP_001404533.1| - 2.5e-22 79.1 0.0 3.4e-22 78.7 0.0 1.1 1 0 0 1 1 1 1 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit TPP_enzyme_M PF00205.17 gi|154150915|ref|YP_001404533.1| - 0.12 12.1 0.0 0.2 11.4 0.0 1.6 1 1 0 1 1 1 0 Thiamine pyrophosphate enzyme, central domain Prismane PF03063.15 gi|154150916|ref|YP_001404534.1| - 4.6e-93 312.3 11.4 6.2e-81 272.3 0.2 2.0 2 0 0 2 2 2 2 Prismane/CO dehydrogenase family Fer4_18 PF13746.1 gi|154150916|ref|YP_001404534.1| - 3.7e-08 33.6 3.6 0.0031 17.9 0.4 3.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|154150916|ref|YP_001404534.1| - 6.3e-08 32.7 6.0 6.3e-08 32.7 4.2 2.4 3 0 0 3 3 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|154150916|ref|YP_001404534.1| - 4.6e-06 26.3 15.3 0.0014 18.4 0.7 3.2 3 0 0 3 3 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|154150916|ref|YP_001404534.1| - 4.9e-06 26.8 7.1 4.9e-06 26.8 4.9 2.7 3 1 0 3 3 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|154150916|ref|YP_001404534.1| - 2.5e-05 24.2 11.1 2.5e-05 24.2 7.7 2.9 3 1 2 5 5 4 3 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|154150916|ref|YP_001404534.1| - 2.7e-05 24.4 14.4 0.0015 18.8 0.3 3.3 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4 PF00037.22 gi|154150916|ref|YP_001404534.1| - 0.0018 17.8 10.4 0.0043 16.5 1.4 3.6 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_20 PF14691.1 gi|154150916|ref|YP_001404534.1| - 0.0049 16.4 6.2 0.0052 16.4 0.3 2.5 1 1 0 2 2 2 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_2 PF12797.2 gi|154150916|ref|YP_001404534.1| - 0.0074 16.1 1.9 0.0074 16.1 1.3 3.6 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_4 PF12800.2 gi|154150916|ref|YP_001404534.1| - 0.027 14.8 2.3 0.027 14.8 1.6 4.4 4 0 0 4 4 3 0 4Fe-4S binding domain Fer4_15 PF13459.1 gi|154150916|ref|YP_001404534.1| - 0.26 11.8 7.3 2.8 8.5 0.5 3.1 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_16 PF13484.1 gi|154150916|ref|YP_001404534.1| - 1.2 9.9 13.0 2.5 8.8 1.7 2.9 1 1 2 3 3 3 0 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|154150916|ref|YP_001404534.1| - 2.8 7.8 25.9 0.037 13.8 8.4 3.5 2 1 2 4 4 3 0 4Fe-4S dicluster domain CbiA PF01656.18 gi|154150917|ref|YP_001404535.1| - 9.6e-10 38.1 0.0 1.2e-09 37.8 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain YhjQ PF06564.7 gi|154150917|ref|YP_001404535.1| - 2.3e-05 23.8 0.0 0.047 13.0 0.0 2.2 2 0 0 2 2 2 2 YhjQ protein ArsA_ATPase PF02374.10 gi|154150917|ref|YP_001404535.1| - 0.00072 18.6 0.0 0.0011 18.0 0.0 1.3 1 0 0 1 1 1 1 Anion-transporting ATPase CbiA PF01656.18 gi|154150918|ref|YP_001404536.1| - 1.5e-21 76.6 0.0 1.9e-21 76.3 0.0 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fer4_NifH PF00142.13 gi|154150918|ref|YP_001404536.1| - 5.6e-06 25.7 0.1 0.035 13.3 0.0 2.2 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_31 PF13614.1 gi|154150918|ref|YP_001404536.1| - 2.8e-05 24.0 0.1 0.0053 16.6 0.0 2.2 2 0 0 2 2 2 2 AAA domain ArsA_ATPase PF02374.10 gi|154150918|ref|YP_001404536.1| - 3e-05 23.2 0.2 4.4e-05 22.6 0.1 1.2 1 0 0 1 1 1 1 Anion-transporting ATPase NACHT PF05729.7 gi|154150918|ref|YP_001404536.1| - 0.09 12.4 0.0 0.17 11.5 0.0 1.4 1 0 0 1 1 1 0 NACHT domain AAA_24 PF13479.1 gi|154150918|ref|YP_001404536.1| - 0.092 12.3 0.1 0.79 9.2 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.1 gi|154150918|ref|YP_001404536.1| - 0.093 12.7 0.6 0.46 10.4 0.0 2.2 2 1 0 2 2 2 0 AAA ATPase domain AAA_25 PF13481.1 gi|154150918|ref|YP_001404536.1| - 0.58 9.5 3.1 0.52 9.6 0.5 2.0 2 1 0 2 2 2 0 AAA domain DUF87 PF01935.12 gi|154150918|ref|YP_001404536.1| - 1.8 8.3 4.4 1.5 8.6 0.5 2.2 2 1 0 2 2 2 0 Domain of unknown function DUF87 TraB PF01963.12 gi|154150919|ref|YP_001404537.1| - 6e-43 147.1 0.1 8.4e-43 146.6 0.0 1.2 1 0 0 1 1 1 1 TraB family HI0933_like PF03486.9 gi|154150921|ref|YP_001404539.1| - 1.2e-112 376.3 0.0 1.4e-112 376.2 0.0 1.0 1 0 0 1 1 1 1 HI0933-like protein DAO PF01266.19 gi|154150921|ref|YP_001404539.1| - 1.1e-10 40.9 0.4 8.1e-05 21.6 0.0 2.3 1 1 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox_3 PF13738.1 gi|154150921|ref|YP_001404539.1| - 9.3e-09 35.6 0.0 3.5e-08 33.7 0.0 1.8 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.19 gi|154150921|ref|YP_001404539.1| - 3.3e-08 32.7 0.1 0.00061 18.7 0.0 2.5 2 1 0 2 2 2 2 FAD binding domain Pyr_redox_2 PF07992.9 gi|154150921|ref|YP_001404539.1| - 2.9e-06 27.2 0.0 0.00015 21.6 0.0 2.7 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|154150921|ref|YP_001404539.1| - 5e-05 22.3 0.7 0.18 10.6 0.1 2.2 2 0 0 2 2 2 2 Glucose inhibited division protein A FAD_oxidored PF12831.2 gi|154150921|ref|YP_001404539.1| - 0.00011 21.3 0.0 0.00013 21.1 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.1 gi|154150921|ref|YP_001404539.1| - 0.00093 19.1 0.1 0.0024 17.8 0.0 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.12 gi|154150921|ref|YP_001404539.1| - 0.0015 17.6 0.0 0.0029 16.7 0.0 1.4 1 0 0 1 1 1 1 Thi4 family Lycopene_cycl PF05834.7 gi|154150921|ref|YP_001404539.1| - 0.0026 16.7 0.1 0.0061 15.5 0.1 1.5 2 0 0 2 2 2 1 Lycopene cyclase protein NOB1_Zn_bind PF08772.6 gi|154150922|ref|YP_001404540.1| - 0.0029 17.4 0.3 0.0049 16.6 0.2 1.5 1 1 0 1 1 1 1 Nin one binding (NOB1) Zn-ribbon like UPF0547 PF10571.4 gi|154150922|ref|YP_001404540.1| - 0.0084 15.7 5.4 0.095 12.4 0.4 2.4 2 0 0 2 2 2 1 Uncharacterised protein family UPF0547 DUF1922 PF09082.5 gi|154150922|ref|YP_001404540.1| - 0.0094 15.9 0.0 0.012 15.7 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1922) zf-NADH-PPase PF09297.6 gi|154150922|ref|YP_001404540.1| - 0.021 14.3 3.0 2.5 7.7 0.1 2.9 3 0 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain zinc_ribbon_5 PF13719.1 gi|154150922|ref|YP_001404540.1| - 0.022 14.3 0.8 1.5 8.4 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|154150922|ref|YP_001404540.1| - 0.023 13.8 2.4 0.066 12.4 1.7 1.7 1 1 0 1 1 1 0 zinc-ribbon domain zf-TFIIB PF13453.1 gi|154150922|ref|YP_001404540.1| - 0.038 13.1 1.0 2.5 7.3 0.0 2.8 3 1 0 3 3 3 0 Transcription factor zinc-finger zinc_ribbon_4 PF13717.1 gi|154150922|ref|YP_001404540.1| - 0.059 13.0 0.5 3.8 7.2 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain RRF_GI PF12614.3 gi|154150922|ref|YP_001404540.1| - 0.12 12.2 0.0 0.14 11.9 0.0 1.1 1 0 0 1 1 1 0 Ribosome recycling factor DZR PF12773.2 gi|154150922|ref|YP_001404540.1| - 0.12 12.1 1.3 0.37 10.6 1.0 1.6 1 1 0 1 1 1 0 Double zinc ribbon Nudix_N_2 PF14803.1 gi|154150922|ref|YP_001404540.1| - 0.14 11.8 0.8 1.6 8.4 0.1 2.3 2 0 0 2 2 2 0 Nudix N-terminal Zn-ribbon_8 PF09723.5 gi|154150922|ref|YP_001404540.1| - 0.88 9.5 6.1 6.6 6.7 4.2 2.4 1 1 0 1 1 1 0 Zinc ribbon domain zf-ISL3 PF14690.1 gi|154150922|ref|YP_001404540.1| - 1.3 9.0 4.7 7.5 6.6 0.1 2.5 1 1 1 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf-Sec23_Sec24 PF04810.10 gi|154150922|ref|YP_001404540.1| - 1.6 8.3 4.3 13 5.4 3.0 2.1 1 1 0 1 1 1 0 Sec23/Sec24 zinc finger Rad50_zn_hook PF04423.9 gi|154150922|ref|YP_001404540.1| - 2.4 7.6 5.3 11 5.5 0.0 3.0 3 0 0 3 3 3 0 Rad50 zinc hook motif zf-RING_4 PF14570.1 gi|154150922|ref|YP_001404540.1| - 4.5 6.9 6.7 20 4.8 1.2 2.4 1 1 1 2 2 2 0 RING/Ubox like zinc-binding domain DUF4379 PF14311.1 gi|154150922|ref|YP_001404540.1| - 6.7 6.6 6.9 13 5.6 0.1 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4379) F420_ligase PF01996.11 gi|154150923|ref|YP_001404541.1| - 5.8e-55 185.8 0.0 6.5e-55 185.6 0.0 1.0 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase A_deaminase PF00962.17 gi|154150924|ref|YP_001404542.1| - 5.5e-10 38.6 0.0 8.6e-10 38.0 0.0 1.2 1 0 0 1 1 1 1 Adenosine/AMP deaminase Amidohydro_1 PF01979.15 gi|154150924|ref|YP_001404542.1| - 1.1e-05 25.3 0.0 0.088 12.4 0.0 2.2 1 1 0 2 2 2 2 Amidohydrolase family Amidohydro_5 PF13594.1 gi|154150924|ref|YP_001404542.1| - 3.8e-05 23.4 0.0 8.4e-05 22.3 0.0 1.6 1 0 0 1 1 1 1 Amidohydrolase Amidohydro_4 PF13147.1 gi|154150924|ref|YP_001404542.1| - 0.00011 22.3 2.8 0.00071 19.6 1.9 2.1 1 1 0 1 1 1 1 Amidohydrolase Usp PF00582.21 gi|154150925|ref|YP_001404543.1| - 1.8e-33 115.7 0.3 2e-33 115.5 0.2 1.0 1 0 0 1 1 1 1 Universal stress protein family Oxidored_nitro PF00148.14 gi|154150925|ref|YP_001404543.1| - 0.056 12.0 0.0 0.058 12.0 0.0 1.1 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase CBS PF00571.23 gi|154150926|ref|YP_001404544.1| - 1.6e-47 158.9 9.1 1.9e-16 59.5 0.1 4.1 4 0 0 4 4 4 4 CBS domain Peptidase_S55 PF05580.7 gi|154150926|ref|YP_001404544.1| - 0.1 12.0 0.0 0.37 10.2 0.0 1.8 2 0 0 2 2 2 0 SpoIVB peptidase S55 Proteasome PF00227.21 gi|154150927|ref|YP_001404545.1| - 2.7e-57 193.1 1.1 3.3e-57 192.8 0.8 1.1 1 0 0 1 1 1 1 Proteasome subunit Beta-Casp PF10996.3 gi|154150928|ref|YP_001404546.1| - 3.7e-32 110.8 0.0 8.5e-32 109.7 0.0 1.6 1 0 0 1 1 1 1 Beta-Casp domain Lactamase_B PF00753.22 gi|154150928|ref|YP_001404546.1| - 1.6e-20 73.5 0.2 3.3e-20 72.5 0.1 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily RMMBL PF07521.7 gi|154150928|ref|YP_001404546.1| - 1.2e-13 50.5 0.0 3.7e-13 49.0 0.0 1.9 1 0 0 1 1 1 1 RNA-metabolising metallo-beta-lactamase Lactamase_B_2 PF12706.2 gi|154150928|ref|YP_001404546.1| - 1.6e-09 37.5 0.1 3.8e-09 36.3 0.0 1.6 1 0 0 1 1 1 1 Beta-lactamase superfamily domain KH_2 PF07650.12 gi|154150928|ref|YP_001404546.1| - 4.7e-05 22.8 0.3 0.00018 20.9 0.1 2.1 2 0 0 2 2 2 1 KH domain Lactamase_B_3 PF13483.1 gi|154150928|ref|YP_001404546.1| - 7.9e-05 22.4 0.0 0.00017 21.3 0.0 1.5 1 0 0 1 1 1 1 Beta-lactamase superfamily domain KH_1 PF00013.24 gi|154150928|ref|YP_001404546.1| - 0.0074 15.9 0.3 0.019 14.5 0.2 1.7 1 0 0 1 1 1 1 KH domain KH_4 PF13083.1 gi|154150928|ref|YP_001404546.1| - 0.048 13.3 0.1 0.12 11.9 0.0 1.7 1 0 0 1 1 1 0 KH domain MFS_1 PF07690.11 gi|154150929|ref|YP_001404547.1| - 2.9e-30 105.2 59.4 6.3e-22 77.7 18.3 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|154150929|ref|YP_001404547.1| - 2.8e-08 32.7 9.8 2.8e-08 32.7 6.8 2.6 2 1 0 2 2 2 1 Sugar (and other) transporter DUF2627 PF11118.3 gi|154150929|ref|YP_001404547.1| - 7.3 6.7 12.9 4.2 7.5 0.4 3.5 4 0 0 4 4 4 0 Protein of unknown function (DUF2627) OATP PF03137.15 gi|154150929|ref|YP_001404547.1| - 8 4.3 13.1 0.12 10.3 0.5 2.7 3 0 0 3 3 3 0 Organic Anion Transporter Polypeptide (OATP) family TPR_11 PF13414.1 gi|154150930|ref|YP_001404548.1| - 3.9e-34 116.1 23.0 2.2e-10 40.0 4.5 4.1 2 1 2 4 4 4 4 TPR repeat TPR_2 PF07719.12 gi|154150930|ref|YP_001404548.1| - 6.5e-32 106.8 9.0 8.3e-08 31.5 0.0 6.3 6 0 0 6 6 6 5 Tetratricopeptide repeat TPR_1 PF00515.23 gi|154150930|ref|YP_001404548.1| - 7e-30 101.4 14.6 1.1e-09 37.4 0.0 6.4 5 1 1 6 6 6 6 Tetratricopeptide repeat TPR_8 PF13181.1 gi|154150930|ref|YP_001404548.1| - 4.5e-17 60.4 8.6 0.00026 20.5 0.0 6.3 6 0 0 6 6 6 4 Tetratricopeptide repeat TPR_16 PF13432.1 gi|154150930|ref|YP_001404548.1| - 5.1e-17 62.0 11.9 5.2e-06 26.9 0.0 4.1 2 1 3 5 5 5 5 Tetratricopeptide repeat TPR_14 PF13428.1 gi|154150930|ref|YP_001404548.1| - 9.3e-17 60.0 9.0 0.00034 20.9 0.0 6.1 1 1 5 6 6 6 4 Tetratricopeptide repeat TPR_19 PF14559.1 gi|154150930|ref|YP_001404548.1| - 7.1e-15 55.0 12.1 1e-06 28.9 0.1 3.4 2 1 0 3 3 3 3 Tetratricopeptide repeat TPR_12 PF13424.1 gi|154150930|ref|YP_001404548.1| - 4e-14 52.2 16.7 0.00023 21.0 0.0 4.9 2 2 2 4 4 4 3 Tetratricopeptide repeat TPR_7 PF13176.1 gi|154150930|ref|YP_001404548.1| - 8e-14 50.2 6.2 0.056 13.2 0.0 6.3 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_9 PF13371.1 gi|154150930|ref|YP_001404548.1| - 7e-10 38.6 0.7 0.12 12.1 0.0 4.4 2 2 3 5 5 5 2 Tetratricopeptide repeat TPR_17 PF13431.1 gi|154150930|ref|YP_001404548.1| - 2.8e-09 36.4 25.8 0.00075 19.5 0.1 6.6 7 0 0 7 7 7 3 Tetratricopeptide repeat Apc3 PF12895.2 gi|154150930|ref|YP_001404548.1| - 5.3e-09 36.1 11.4 2e-05 24.6 2.1 3.4 1 1 2 3 3 3 3 Anaphase-promoting complex, cyclosome, subunit 3 BTAD PF03704.12 gi|154150930|ref|YP_001404548.1| - 1.4e-07 31.9 2.6 0.035 14.4 0.1 3.2 2 1 1 3 3 3 2 Bacterial transcriptional activator domain DUF3856 PF12968.2 gi|154150930|ref|YP_001404548.1| - 1.8e-05 24.5 1.6 0.63 9.8 0.0 3.5 2 1 0 2 2 2 2 Domain of Unknown Function (DUF3856) NARP1 PF12569.3 gi|154150930|ref|YP_001404548.1| - 4.6e-05 22.3 4.4 0.0038 16.0 0.0 2.9 2 1 1 3 3 3 2 NMDA receptor-regulated protein 1 TPR_15 PF13429.1 gi|154150930|ref|YP_001404548.1| - 0.00033 19.7 6.8 0.02 13.9 1.5 3.0 1 1 1 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.1 gi|154150930|ref|YP_001404548.1| - 0.0029 17.9 15.6 2.9 8.5 0.0 6.1 6 0 0 6 6 6 1 Tetratricopeptide repeat Paf67 PF10255.4 gi|154150930|ref|YP_001404548.1| - 0.011 14.6 0.1 5.9 5.6 0.1 2.8 1 1 1 2 2 2 0 RNA polymerase I-associated factor PAF67 TPR_10 PF13374.1 gi|154150930|ref|YP_001404548.1| - 0.055 13.4 17.5 1.6 8.7 0.0 4.9 5 0 0 5 5 5 0 Tetratricopeptide repeat MIT PF04212.13 gi|154150930|ref|YP_001404548.1| - 0.057 13.3 1.4 0.057 13.3 0.9 5.0 4 1 1 5 5 5 0 MIT (microtubule interacting and transport) domain TPR_4 PF07721.9 gi|154150930|ref|YP_001404548.1| - 0.93 10.1 7.2 25 5.6 0.0 4.5 5 0 0 5 5 4 0 Tetratricopeptide repeat Peptidase_M20 PF01546.23 gi|154150931|ref|YP_001404549.1| - 1.6e-35 122.3 0.0 2.4e-35 121.7 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.9 gi|154150931|ref|YP_001404549.1| - 1.3e-15 57.1 0.0 2.6e-15 56.1 0.0 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain Radical_SAM PF04055.16 gi|154150933|ref|YP_001404551.1| - 8.1e-28 97.6 0.0 1.4e-27 96.8 0.0 1.4 1 0 0 1 1 1 1 Radical SAM superfamily Mob_synth_C PF06463.8 gi|154150933|ref|YP_001404551.1| - 6.6e-22 77.5 0.2 1.1e-21 76.7 0.1 1.4 1 0 0 1 1 1 1 Molybdenum Cofactor Synthesis C Fer4_12 PF13353.1 gi|154150933|ref|YP_001404551.1| - 4.1e-08 33.4 0.0 1.1e-07 32.0 0.0 1.7 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|154150933|ref|YP_001404551.1| - 1e-07 31.9 0.0 2.7e-07 30.6 0.0 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain DUF3783 PF12646.2 gi|154150933|ref|YP_001404551.1| - 0.0072 16.0 0.0 0.02 14.6 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF3783) FtsJ PF01728.14 gi|154150934|ref|YP_001404552.1| - 6.2e-51 172.9 0.0 7e-51 172.7 0.0 1.0 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_23 PF13489.1 gi|154150934|ref|YP_001404552.1| - 1.8e-05 24.5 0.0 0.0005 19.8 0.0 2.1 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|154150934|ref|YP_001404552.1| - 3.2e-05 23.5 0.0 0.00083 18.9 0.0 2.1 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|154150934|ref|YP_001404552.1| - 0.00048 20.6 0.1 0.0032 18.0 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|154150934|ref|YP_001404552.1| - 0.0088 16.5 0.0 0.96 9.9 0.0 2.3 2 0 0 2 2 2 1 Methyltransferase domain PCNA_N PF00705.13 gi|154150935|ref|YP_001404553.1| - 3.1e-14 52.5 0.4 5.3e-14 51.8 0.1 1.5 2 0 0 2 2 2 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.10 gi|154150935|ref|YP_001404553.1| - 0.00018 21.4 0.0 0.0011 18.9 0.0 2.2 1 1 2 3 3 3 1 Proliferating cell nuclear antigen, C-terminal domain Rad9 PF04139.8 gi|154150935|ref|YP_001404553.1| - 0.0011 18.2 0.0 0.0012 17.9 0.0 1.2 1 0 0 1 1 1 1 Rad9 Rad1 PF02144.11 gi|154150935|ref|YP_001404553.1| - 0.0087 14.8 0.1 0.44 9.2 0.0 2.1 1 1 1 2 2 2 2 Repair protein Rad1/Rec1/Rad17 PuR_N PF09182.5 gi|154150935|ref|YP_001404553.1| - 0.087 12.4 0.1 0.21 11.1 0.1 1.6 1 0 0 1 1 1 0 Bacterial purine repressor, N-terminal DNA_primase_lrg PF04104.9 gi|154150936|ref|YP_001404554.1| - 3e-29 102.1 0.0 1.6e-28 99.6 0.0 2.0 1 1 0 1 1 1 1 Eukaryotic and archaeal DNA primase, large subunit Aldolase_2 PF10120.4 gi|154150937|ref|YP_001404555.1| - 1.4e-26 92.9 0.0 1.5e-26 92.7 0.0 1.1 1 0 0 1 1 1 1 Putative aldolase Ribosomal_S17e PF00833.13 gi|154150938|ref|YP_001404556.1| - 2.3e-08 33.8 0.3 2.6e-08 33.6 0.2 1.0 1 0 0 1 1 1 1 Ribosomal S17 DHDPS PF00701.17 gi|154150939|ref|YP_001404557.1| - 1.6e-92 309.1 0.0 1.8e-92 308.9 0.0 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family PA PF02225.17 gi|154150939|ref|YP_001404557.1| - 0.0078 15.8 0.8 0.013 15.1 0.0 1.8 2 0 0 2 2 2 1 PA domain Methyltransf_6 PF03737.10 gi|154150939|ref|YP_001404557.1| - 0.019 14.8 0.1 0.05 13.4 0.1 1.7 1 1 0 1 1 1 0 Demethylmenaquinone methyltransferase GDC-P PF02347.11 gi|154150939|ref|YP_001404557.1| - 0.086 11.5 0.0 0.13 10.9 0.0 1.1 1 0 0 1 1 1 0 Glycine cleavage system P-protein Pribosyltran_N PF13793.1 gi|154150939|ref|YP_001404557.1| - 0.099 12.3 0.0 0.24 11.1 0.0 1.6 1 0 0 1 1 1 0 N-terminal domain of ribose phosphate pyrophosphokinase DapB_C PF05173.9 gi|154150940|ref|YP_001404558.1| - 4.3e-48 162.4 0.0 6.3e-48 161.8 0.0 1.2 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, C-terminus DapB_N PF01113.15 gi|154150940|ref|YP_001404558.1| - 1.4e-26 92.8 0.4 2.4e-26 92.0 0.3 1.4 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus GFO_IDH_MocA PF01408.17 gi|154150940|ref|YP_001404558.1| - 0.0015 19.0 0.1 0.0029 18.1 0.1 1.5 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold RmlD_sub_bind PF04321.12 gi|154150940|ref|YP_001404558.1| - 0.0072 15.2 0.1 0.01 14.7 0.1 1.3 1 0 0 1 1 1 1 RmlD substrate binding domain Semialdhyde_dh PF01118.19 gi|154150940|ref|YP_001404558.1| - 0.016 15.4 1.3 0.08 13.2 0.8 2.1 1 1 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain NAD_binding_3 PF03447.11 gi|154150940|ref|YP_001404558.1| - 0.1 13.0 0.0 0.2 12.0 0.0 1.6 1 0 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain Fer4 PF00037.22 gi|154150941|ref|YP_001404559.1| - 1e-16 59.7 14.5 1.9e-08 33.5 2.0 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|154150941|ref|YP_001404559.1| - 2.9e-15 55.7 27.9 1.6e-11 43.8 10.8 1.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|154150941|ref|YP_001404559.1| - 5.1e-12 45.0 17.0 1.2e-06 28.1 2.5 2.0 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|154150941|ref|YP_001404559.1| - 8.1e-12 44.3 16.5 5.3e-06 26.0 3.1 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|154150941|ref|YP_001404559.1| - 2.6e-11 43.6 14.6 3.1e-11 43.3 10.1 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|154150941|ref|YP_001404559.1| - 4.9e-11 42.8 15.6 6.4e-11 42.4 10.8 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|154150941|ref|YP_001404559.1| - 4.2e-10 39.3 16.1 1e-09 38.0 11.2 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|154150941|ref|YP_001404559.1| - 1.8e-09 38.1 14.6 9.1e-05 23.1 2.6 2.0 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.2 gi|154150941|ref|YP_001404559.1| - 5.8e-08 32.4 14.2 0.00059 19.9 1.3 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|154150941|ref|YP_001404559.1| - 2.7e-06 27.3 15.9 5e-06 26.4 11.0 1.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|154150941|ref|YP_001404559.1| - 1e-05 25.8 16.9 0.00055 20.3 3.0 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|154150941|ref|YP_001404559.1| - 2e-05 24.8 15.4 0.015 15.6 3.8 2.3 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_15 PF13459.1 gi|154150941|ref|YP_001404559.1| - 4.8e-05 23.8 16.7 0.0024 18.3 11.6 2.2 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_17 PF13534.1 gi|154150941|ref|YP_001404559.1| - 7.7e-05 22.9 16.1 0.013 15.8 2.4 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_11 PF13247.1 gi|154150941|ref|YP_001404559.1| - 0.00012 21.8 10.2 0.00018 21.3 7.1 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|154150941|ref|YP_001404559.1| - 0.002 18.5 19.3 0.027 15.0 4.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain TMCO5 PF14992.1 gi|154150941|ref|YP_001404559.1| - 0.094 11.8 0.3 0.098 11.7 0.2 1.0 1 0 0 1 1 1 0 TMCO5 family Semialdhyde_dh PF01118.19 gi|154150942|ref|YP_001404560.1| - 2.2e-35 121.6 0.0 3.6e-35 120.8 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.13 gi|154150942|ref|YP_001404560.1| - 1.4e-33 116.3 0.1 2.8e-33 115.3 0.0 1.5 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, dimerisation domain NAD_binding_10 PF13460.1 gi|154150942|ref|YP_001404560.1| - 0.0049 16.8 0.1 0.017 15.1 0.0 1.9 1 1 0 1 1 1 1 NADH(P)-binding DapB_N PF01113.15 gi|154150942|ref|YP_001404560.1| - 0.0073 16.2 0.0 0.02 14.8 0.0 1.7 1 1 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus DXP_reductoisom PF02670.11 gi|154150942|ref|YP_001404560.1| - 0.015 15.8 0.0 0.038 14.5 0.0 1.7 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase Saccharop_dh PF03435.13 gi|154150942|ref|YP_001404560.1| - 0.057 12.3 0.0 0.078 11.9 0.0 1.3 1 0 0 1 1 1 0 Saccharopine dehydrogenase GFO_IDH_MocA PF01408.17 gi|154150942|ref|YP_001404560.1| - 0.071 13.6 0.0 0.13 12.7 0.0 1.5 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold Alba PF01918.16 gi|154150943|ref|YP_001404561.1| - 1e-17 63.4 0.3 1.3e-17 63.0 0.2 1.2 1 0 0 1 1 1 1 Alba Na_H_antiport_1 PF06965.7 gi|154150944|ref|YP_001404562.1| - 0.023 13.4 0.1 0.027 13.2 0.1 1.1 1 0 0 1 1 1 0 Na+/H+ antiporter 1 DUF3868 PF12984.2 gi|154150944|ref|YP_001404562.1| - 0.076 12.5 0.0 0.12 11.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function, B. Theta Gene description (DUF3868) DUF373 PF04123.8 gi|154150945|ref|YP_001404563.1| - 1.5e-110 369.5 16.0 2e-110 369.0 11.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF373) CHDCT2 PF08074.6 gi|154150946|ref|YP_001404564.1| - 2.1 8.0 14.5 0.71 9.5 2.4 2.9 1 1 1 3 3 3 0 CHDCT2 (NUC038) domain FtsZ_C PF12327.3 gi|154150947|ref|YP_001404565.1| - 5.1e-33 113.0 0.3 3.8e-32 110.2 0.1 2.4 2 0 0 2 2 2 1 FtsZ family, C-terminal domain Tubulin PF00091.20 gi|154150947|ref|YP_001404565.1| - 8e-32 110.8 2.5 3e-31 108.9 1.7 1.8 1 1 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain CPSase_L_chain PF00289.17 gi|154150947|ref|YP_001404565.1| - 0.027 14.5 0.7 0.47 10.5 0.3 2.5 1 1 1 2 2 2 0 Carbamoyl-phosphate synthase L chain, N-terminal domain RHH_1 PF01402.16 gi|154150948|ref|YP_001404566.1| - 6.7e-08 32.0 0.0 8.4e-08 31.7 0.0 1.1 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family RHH_2 PF03693.9 gi|154150948|ref|YP_001404566.1| - 0.00077 19.5 0.0 0.00089 19.3 0.0 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0156) DUF2191 PF09957.4 gi|154150948|ref|YP_001404566.1| - 0.068 12.9 0.0 0.089 12.6 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2191) Aminotran_1_2 PF00155.16 gi|154150949|ref|YP_001404567.1| - 4.5e-36 124.5 0.0 8e-34 117.1 0.0 2.0 1 1 0 1 1 1 1 Aminotransferase class I and II NTP_transf_3 PF12804.2 gi|154150950|ref|YP_001404568.1| - 8.5e-17 61.6 0.0 9.2e-17 61.5 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.14 gi|154150950|ref|YP_001404568.1| - 3.1e-06 26.9 0.0 8.7e-06 25.5 0.0 1.6 1 1 0 1 1 1 1 Cytidylyltransferase IspD PF01128.14 gi|154150950|ref|YP_001404568.1| - 0.00069 19.1 0.0 0.002 17.6 0.0 1.7 2 0 0 2 2 2 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NTP_transferase PF00483.18 gi|154150950|ref|YP_001404568.1| - 0.0071 15.6 0.1 0.0099 15.1 0.0 1.4 1 1 0 1 1 1 1 Nucleotidyl transferase Saccharop_dh_N PF04455.7 gi|154150951|ref|YP_001404569.1| - 6.6e-38 128.9 0.0 1.4e-37 127.9 0.0 1.6 1 0 0 1 1 1 1 LOR/SDH bifunctional enzyme conserved region TPP_enzyme_M PF00205.17 gi|154150951|ref|YP_001404569.1| - 0.0048 16.6 0.2 0.92 9.2 0.0 2.5 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, central domain ACT_5 PF13710.1 gi|154150951|ref|YP_001404569.1| - 0.027 14.2 0.0 6.6 6.6 0.0 2.6 2 0 0 2 2 2 0 ACT domain RNA_POL_M_15KD PF02150.11 gi|154150952|ref|YP_001404570.1| - 0.94 9.2 4.3 8.4 6.1 0.7 2.5 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit CarboxypepD_reg PF13620.1 gi|154150953|ref|YP_001404571.1| - 2.6e-05 24.1 2.1 0.0055 16.7 0.3 3.0 2 0 0 2 2 2 2 Carboxypeptidase regulatory-like domain Cna_B PF05738.8 gi|154150953|ref|YP_001404571.1| - 0.00042 20.0 3.2 0.2 11.4 0.0 4.0 4 0 0 4 4 4 1 Cna protein B-type domain TRAP_beta PF05753.9 gi|154150953|ref|YP_001404571.1| - 0.0067 15.6 0.0 0.015 14.5 0.0 1.5 1 0 0 1 1 1 1 Translocon-associated protein beta (TRAPB) DUF3244 PF11589.3 gi|154150953|ref|YP_001404571.1| - 0.017 14.8 0.3 3 7.5 0.0 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF3244) phage_tail_N PF08400.5 gi|154150953|ref|YP_001404571.1| - 0.019 14.7 0.7 0.37 10.5 0.2 2.4 2 0 0 2 2 2 0 Prophage tail fibre N-terminal Gmad2 PF10648.4 gi|154150953|ref|YP_001404571.1| - 0.054 13.6 0.1 1.3 9.2 0.0 2.6 2 0 0 2 2 2 0 Immunoglobulin-like domain of bacterial spore germination Imm-NTF2-2 PF15631.1 gi|154150953|ref|YP_001404571.1| - 0.096 12.6 0.1 7.3 6.6 0.0 2.5 2 0 0 2 2 2 0 NTF2 fold immunity protein Big_3_4 PF13754.1 gi|154150953|ref|YP_001404571.1| - 0.4 11.0 12.1 2.2 8.6 0.1 4.4 3 1 0 3 3 3 0 Bacterial Ig-like domain (group 3) HupF_HypC PF01455.13 gi|154150954|ref|YP_001404572.1| - 3.5e-21 74.9 0.1 4e-21 74.7 0.1 1.0 1 0 0 1 1 1 1 HupF/HypC family HypA PF01155.14 gi|154150955|ref|YP_001404573.1| - 1.3e-22 79.6 0.1 1.5e-22 79.4 0.1 1.0 1 0 0 1 1 1 1 Hydrogenase expression/synthesis hypA family PhnA_Zn_Ribbon PF08274.7 gi|154150955|ref|YP_001404573.1| - 0.043 13.5 0.7 0.095 12.4 0.5 1.6 1 1 0 1 1 1 0 PhnA Zinc-Ribbon AIRS_C PF02769.17 gi|154150956|ref|YP_001404574.1| - 1.9e-29 102.6 2.0 3.1e-29 101.9 1.4 1.3 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.19 gi|154150956|ref|YP_001404574.1| - 7.2e-15 55.0 1.1 2e-14 53.6 0.7 1.7 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain DUF447 PF04289.7 gi|154150957|ref|YP_001404575.1| - 5.6e-51 172.6 0.0 6.2e-51 172.4 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF447) CitG PF01874.11 gi|154150958|ref|YP_001404576.1| - 3.8e-74 249.3 0.1 4.6e-74 249.0 0.1 1.0 1 0 0 1 1 1 1 ATP:dephospho-CoA triphosphoribosyl transferase ComX PF05952.7 gi|154150958|ref|YP_001404576.1| - 0.082 12.4 0.0 0.25 10.8 0.0 1.8 1 0 0 1 1 1 0 Bacillus competence pheromone ComX Dus PF01207.12 gi|154150959|ref|YP_001404577.1| - 5.7e-05 22.0 0.4 0.00041 19.2 0.3 2.0 1 1 0 1 1 1 1 Dihydrouridine synthase (Dus) IMPDH PF00478.20 gi|154150959|ref|YP_001404577.1| - 0.00036 19.5 0.1 0.00055 18.9 0.1 1.2 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain His_biosynth PF00977.16 gi|154150959|ref|YP_001404577.1| - 0.0027 17.0 0.1 0.033 13.4 0.0 2.2 1 1 1 2 2 2 1 Histidine biosynthesis protein CbiX PF01903.12 gi|154150960|ref|YP_001404578.1| - 1.4e-23 83.0 0.0 1.6e-23 82.8 0.0 1.0 1 0 0 1 1 1 1 CbiX CbiK PF06180.6 gi|154150960|ref|YP_001404578.1| - 6.8e-06 25.3 0.0 7.1e-06 25.2 0.0 1.0 1 0 0 1 1 1 1 Cobalt chelatase (CbiK) Ferrochelatase PF00762.14 gi|154150960|ref|YP_001404578.1| - 0.0013 17.7 0.0 0.0019 17.2 0.0 1.1 1 0 0 1 1 1 1 Ferrochelatase Mur_ligase_M PF08245.7 gi|154150961|ref|YP_001404579.1| - 2.9e-05 24.1 0.4 4.6e-05 23.5 0.3 1.3 1 0 0 1 1 1 1 Mur ligase middle domain Oxidored_nitro PF00148.14 gi|154150962|ref|YP_001404580.1| - 8.6e-17 60.8 0.2 1.3e-16 60.2 0.1 1.2 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase GATase_3 PF07685.9 gi|154150963|ref|YP_001404581.1| - 5.1e-32 110.6 0.0 8.8e-32 109.8 0.0 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.18 gi|154150963|ref|YP_001404581.1| - 1.7e-20 73.2 0.0 2.7e-20 72.6 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.1 gi|154150963|ref|YP_001404581.1| - 9.8e-17 61.2 1.0 3.9e-11 42.9 0.0 2.2 1 1 0 2 2 2 2 AAA domain Prefoldin_2 PF01920.15 gi|154150963|ref|YP_001404581.1| - 0.26 11.0 0.0 0.45 10.2 0.0 1.2 1 0 0 1 1 1 0 Prefoldin subunit Aminotran_4 PF01063.14 gi|154150964|ref|YP_001404582.1| - 6e-49 166.5 0.0 8.6e-49 166.0 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class IV HNH_3 PF13392.1 gi|154150965|ref|YP_001404583.1| - 0.00069 18.9 3.7 0.001 18.3 1.5 2.0 1 1 0 1 1 1 1 HNH endonuclease TPR_8 PF13181.1 gi|154150965|ref|YP_001404583.1| - 0.18 11.6 7.6 19 5.3 0.2 3.8 3 0 0 3 3 3 0 Tetratricopeptide repeat HNH PF01844.18 gi|154150965|ref|YP_001404583.1| - 1.6 8.7 18.1 0.036 13.9 7.2 2.3 3 0 0 3 3 3 0 HNH endonuclease PKD PF00801.15 gi|154150966|ref|YP_001404584.1| - 4e-147 478.1 134.7 1.7e-17 62.9 3.8 11.6 11 0 0 11 11 11 11 PKD domain YycI PF09648.5 gi|154150966|ref|YP_001404584.1| - 6.4e-07 29.0 0.0 1e-06 28.4 0.0 1.2 1 0 0 1 1 1 1 YycH protein Clathrin_propel PF01394.15 gi|154150966|ref|YP_001404584.1| - 0.12 12.6 3.3 2.4 8.6 0.1 4.1 4 0 0 4 4 4 0 Clathrin propeller repeat DUF4625 PF15418.1 gi|154150966|ref|YP_001404584.1| - 0.22 11.6 6.3 43 4.2 0.0 5.8 7 0 0 7 7 7 0 Domain of unknown function (DUF4625) DUF3421 PF11901.3 gi|154150967|ref|YP_001404585.1| - 0.063 13.0 6.5 1.7 8.4 0.1 4.0 4 1 1 5 5 5 0 Protein of unknown function (DUF3421) DUF2064 PF09837.4 gi|154150967|ref|YP_001404585.1| - 0.53 9.9 10.6 14 5.3 0.1 5.5 7 0 0 7 7 7 0 Uncharacterized protein conserved in bacteria (DUF2064) Lipocalin_4 PF13648.1 gi|154150968|ref|YP_001404586.1| - 0.096 13.3 3.8 0.12 12.9 2.7 1.2 1 0 0 1 1 1 0 Lipocalin-like domain DUF350 PF03994.9 gi|154150969|ref|YP_001404587.1| - 3.7e-21 74.6 22.0 1.9e-12 46.7 2.9 3.3 2 2 1 3 3 3 2 Domain of Unknown Function (DUF350) YwiC PF14256.1 gi|154150969|ref|YP_001404587.1| - 0.009 16.0 5.2 0.39 10.8 0.3 2.1 1 1 1 2 2 2 2 YwiC-like protein Brr6_like_C_C PF10104.4 gi|154150969|ref|YP_001404587.1| - 0.029 13.8 7.5 0.15 11.5 0.3 2.5 2 1 0 2 2 2 0 Di-sulfide bridge nucleocytoplasmic transport domain Per1 PF04080.8 gi|154150969|ref|YP_001404587.1| - 0.092 12.1 0.7 2.1 7.7 0.0 2.0 2 0 0 2 2 2 0 Per1-like Yip1 PF04893.12 gi|154150969|ref|YP_001404587.1| - 0.24 10.8 19.0 0.37 10.2 13.1 1.3 1 0 0 1 1 1 0 Yip1 domain DUF4234 PF14018.1 gi|154150969|ref|YP_001404587.1| - 0.35 10.6 7.0 1.1 9.0 0.3 3.1 2 1 1 3 3 3 0 Domain of unknown function (DUF4234) Herpes_UL20 PF04544.7 gi|154150969|ref|YP_001404587.1| - 0.72 9.6 11.3 0.31 10.8 1.9 2.1 2 0 0 2 2 2 0 Herpesvirus egress protein UL20 DUF2975 PF11188.3 gi|154150969|ref|YP_001404587.1| - 0.95 9.1 16.7 3.2 7.4 2.2 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF2975) Reticulon PF02453.12 gi|154150969|ref|YP_001404587.1| - 1.6 8.3 6.9 0.37 10.3 0.2 2.4 1 1 0 2 2 2 0 Reticulon Colicin_V PF02674.11 gi|154150969|ref|YP_001404587.1| - 1.6 8.5 23.2 1.7 8.5 2.2 2.2 1 1 1 2 2 2 0 Colicin V production protein DUF485 PF04341.7 gi|154150969|ref|YP_001404587.1| - 3.7 7.3 14.3 0.97 9.1 1.6 3.0 1 1 0 3 3 3 0 Protein of unknown function, DUF485 DUF2206 PF09971.4 gi|154150969|ref|YP_001404587.1| - 5 5.8 12.8 1.7e+02 0.8 8.9 2.0 1 1 0 1 1 1 0 Predicted membrane protein (DUF2206) TMEM192 PF14802.1 gi|154150969|ref|YP_001404587.1| - 5.7 5.7 7.2 7.7 5.2 0.5 2.3 2 1 0 2 2 2 0 TMEM192 family TetR_N PF00440.18 gi|154150970|ref|YP_001404588.1| - 8.2e-14 50.9 0.0 1.7e-13 49.9 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family Pox_RNA_pol PF03293.9 gi|154150970|ref|YP_001404588.1| - 0.012 15.1 0.0 0.016 14.7 0.0 1.2 1 0 0 1 1 1 0 Poxvirus DNA-directed RNA polymerase, 18 kD subunit CBM_5_12 PF02839.9 gi|154150972|ref|YP_001404590.1| - 1.9e-08 33.7 5.4 2.1e-08 33.6 3.7 1.0 1 0 0 1 1 1 1 Carbohydrate binding domain CBM_5_12_2 PF14600.1 gi|154150972|ref|YP_001404590.1| - 0.0015 18.0 1.3 0.0016 18.0 0.9 1.0 1 0 0 1 1 1 1 Cellulose-binding domain PEGA PF08308.6 gi|154150974|ref|YP_001404592.1| - 7e-33 112.2 10.8 4e-18 64.9 0.8 3.6 3 1 1 4 4 4 2 PEGA domain CarboxypepD_reg PF13620.1 gi|154150974|ref|YP_001404592.1| - 2.9e-06 27.2 5.1 0.0019 18.2 1.0 3.3 2 1 1 3 3 3 2 Carboxypeptidase regulatory-like domain Big_2 PF02368.13 gi|154150974|ref|YP_001404592.1| - 2.6 7.9 8.9 7.7 6.4 0.3 3.3 2 1 0 2 2 2 0 Bacterial Ig-like domain (group 2) zinc_ribbon_2 PF13240.1 gi|154150975|ref|YP_001404593.1| - 1.5e-05 24.2 3.8 2.5e-05 23.5 2.6 1.4 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.2 gi|154150975|ref|YP_001404593.1| - 0.00012 21.8 0.4 0.00023 20.9 0.3 1.3 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.1 gi|154150975|ref|YP_001404593.1| - 0.00039 19.5 4.6 0.00064 18.8 3.2 1.4 1 0 0 1 1 1 1 zinc-ribbon domain bPH_3 PF14470.1 gi|154150975|ref|YP_001404593.1| - 0.0047 17.1 0.1 0.0083 16.3 0.1 1.4 1 0 0 1 1 1 1 Bacterial PH domain Vps36_ESCRT-II PF11605.3 gi|154150975|ref|YP_001404593.1| - 0.066 13.0 0.4 0.41 10.4 0.2 2.1 1 1 0 1 1 1 0 Vacuolar protein sorting protein 36 Vps36 zf-DHHC PF01529.15 gi|154150975|ref|YP_001404593.1| - 0.075 12.4 0.1 0.14 11.5 0.1 1.3 1 0 0 1 1 1 0 DHHC palmitoyltransferase DUF2116 PF09889.4 gi|154150975|ref|YP_001404593.1| - 0.2 11.4 4.1 2.6 7.9 0.4 2.3 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) DUF2897 PF11446.3 gi|154150975|ref|YP_001404593.1| - 0.21 11.4 5.2 0.39 10.5 3.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2897) zinc_ribbon_5 PF13719.1 gi|154150975|ref|YP_001404593.1| - 0.37 10.4 1.4 1.3 8.6 0.0 2.5 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|154150975|ref|YP_001404593.1| - 0.39 10.4 1.3 1.6 8.5 0.0 2.5 2 0 0 2 2 2 0 zinc-ribbon domain GFA PF04828.9 gi|154150975|ref|YP_001404593.1| - 0.46 10.4 1.6 25 4.8 0.1 2.6 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme DUF4330 PF14221.1 gi|154150975|ref|YP_001404593.1| - 1.7 8.4 6.1 0.85 9.4 1.3 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4330) PLRV_ORF5 PF01690.12 gi|154150975|ref|YP_001404593.1| - 2.3 7.2 11.8 4.8 6.2 8.2 1.5 1 0 0 1 1 1 0 Potato leaf roll virus readthrough protein tRNA-synt_2b PF00587.20 gi|154150976|ref|YP_001404594.1| - 1.1e-37 129.3 0.0 2.2e-37 128.3 0.0 1.5 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.17 gi|154150976|ref|YP_001404594.1| - 1.7e-22 79.4 3.4 3.3e-22 78.5 2.4 1.5 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain DUF1652 PF07865.6 gi|154150976|ref|YP_001404594.1| - 0.052 13.1 0.1 0.095 12.3 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1652) Nramp PF01566.13 gi|154150977|ref|YP_001404595.1| - 1.7e-70 237.6 31.2 2.1e-70 237.3 21.6 1.1 1 0 0 1 1 1 1 Natural resistance-associated macrophage protein MgtE_N PF03448.12 gi|154150979|ref|YP_001404597.1| - 2e-21 76.1 5.5 5.4e-21 74.8 3.8 1.8 1 0 0 1 1 1 1 MgtE intracellular N domain CBS PF00571.23 gi|154150979|ref|YP_001404597.1| - 6.4e-16 57.8 0.4 8.7e-12 44.6 0.0 3.1 2 0 0 2 2 2 2 CBS domain FliG_M PF14841.1 gi|154150979|ref|YP_001404597.1| - 8.4e-06 25.7 1.6 0.071 13.1 0.0 2.9 2 1 1 3 3 3 2 FliG middle domain PRC PF05239.11 gi|154150979|ref|YP_001404597.1| - 4.4e-05 23.2 1.2 0.0001 22.1 0.1 2.2 2 0 0 2 2 2 1 PRC-barrel domain Methyltransf_11 PF08241.7 gi|154150980|ref|YP_001404598.1| - 2.5e-18 66.3 0.0 4e-18 65.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|154150980|ref|YP_001404598.1| - 1.5e-14 54.0 0.0 1.9e-14 53.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|154150980|ref|YP_001404598.1| - 3.5e-13 49.7 0.0 5.5e-13 49.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|154150980|ref|YP_001404598.1| - 2.9e-10 39.9 0.0 3.9e-10 39.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|154150980|ref|YP_001404598.1| - 5.1e-09 36.5 0.0 7.5e-09 35.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|154150980|ref|YP_001404598.1| - 6.9e-09 36.2 0.0 9.1e-09 35.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|154150980|ref|YP_001404598.1| - 1.5e-07 31.4 0.2 2.3e-07 30.8 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|154150980|ref|YP_001404598.1| - 7.3e-05 21.9 0.0 9.3e-05 21.6 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family TehB PF03848.9 gi|154150980|ref|YP_001404598.1| - 0.0018 17.4 0.0 0.0027 16.9 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB MTS PF05175.9 gi|154150980|ref|YP_001404598.1| - 0.0038 16.6 0.0 0.0056 16.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_17 PF12692.2 gi|154150980|ref|YP_001404598.1| - 0.0063 16.2 0.0 0.0095 15.6 0.0 1.2 1 0 0 1 1 1 1 S-adenosyl-L-methionine methyltransferase MetW PF07021.7 gi|154150980|ref|YP_001404598.1| - 0.0067 15.8 0.0 0.0089 15.4 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW CMAS PF02353.15 gi|154150980|ref|YP_001404598.1| - 0.011 14.7 0.0 0.015 14.3 0.0 1.1 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Methyltransf_8 PF05148.10 gi|154150980|ref|YP_001404598.1| - 0.061 12.9 0.0 0.29 10.7 0.0 1.8 1 1 0 1 1 1 0 Hypothetical methyltransferase Methyltransf_9 PF08003.6 gi|154150980|ref|YP_001404598.1| - 0.075 11.7 0.0 0.092 11.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) TPMT PF05724.6 gi|154150980|ref|YP_001404598.1| - 0.12 11.7 0.0 0.18 11.2 0.0 1.2 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) PEGA PF08308.6 gi|154150981|ref|YP_001404599.1| - 3.1e-06 26.8 1.2 3.1e-06 26.8 0.8 2.0 3 0 0 3 3 3 1 PEGA domain DUF3982 PF13138.1 gi|154150981|ref|YP_001404599.1| - 4.3 7.2 5.7 0.98 9.3 0.7 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3982) NIR_SIR PF01077.17 gi|154150982|ref|YP_001404600.1| - 2.4e-29 101.7 0.0 3.7e-29 101.1 0.0 1.3 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.12 gi|154150982|ref|YP_001404600.1| - 1.4e-12 47.0 0.1 3e-12 45.9 0.1 1.6 1 0 0 1 1 1 1 Nitrite/Sulfite reductase ferredoxin-like half domain GcpE PF04551.9 gi|154150982|ref|YP_001404600.1| - 0.0034 16.2 0.2 0.0042 15.9 0.1 1.1 1 0 0 1 1 1 1 GcpE protein PKD PF00801.15 gi|154150983|ref|YP_001404601.1| - 1.3e-52 175.3 74.5 1.6e-14 53.4 9.0 4.6 4 0 0 4 4 4 4 PKD domain Ig_2 PF13895.1 gi|154150983|ref|YP_001404601.1| - 0.0096 16.0 27.1 0.033 14.3 1.3 4.3 4 0 0 4 4 4 2 Immunoglobulin domain Phage_min_tail PF05939.8 gi|154150983|ref|YP_001404601.1| - 0.034 14.1 3.8 6 6.8 0.0 3.5 3 0 0 3 3 3 0 Phage minor tail protein Y_Y_Y PF07495.8 gi|154150983|ref|YP_001404601.1| - 0.27 11.0 14.3 0.59 9.9 0.6 3.7 3 0 0 3 3 3 0 Y_Y_Y domain DUF2115 PF09888.4 gi|154150984|ref|YP_001404602.1| - 1.4e-49 168.3 0.0 1.7e-49 168.0 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2115) HMGL-like PF00682.14 gi|154150985|ref|YP_001404603.1| - 1.3e-64 218.1 0.0 2.3e-64 217.3 0.0 1.4 1 0 0 1 1 1 1 HMGL-like LeuA_dimer PF08502.5 gi|154150985|ref|YP_001404603.1| - 5.1e-33 113.7 1.1 9.1e-33 112.8 0.7 1.4 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain TPP_enzyme_N PF02776.13 gi|154150986|ref|YP_001404604.1| - 1.3e-59 200.5 0.0 2.5e-59 199.6 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.16 gi|154150986|ref|YP_001404604.1| - 8.1e-51 171.6 0.4 4.6e-50 169.1 0.0 2.4 2 1 1 3 3 3 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.17 gi|154150986|ref|YP_001404604.1| - 1.5e-50 170.5 0.0 2.8e-50 169.6 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain POR_N PF01855.14 gi|154150986|ref|YP_001404604.1| - 0.05 13.0 0.1 0.094 12.2 0.1 1.4 1 0 0 1 1 1 0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Keratin_matx PF04579.7 gi|154150986|ref|YP_001404604.1| - 0.087 13.1 0.0 0.18 12.0 0.0 1.5 1 0 0 1 1 1 0 Keratin, high-sulphur matrix protein ALS_ss_C PF10369.4 gi|154150987|ref|YP_001404605.1| - 9.3e-30 102.1 6.8 1.5e-29 101.5 2.0 2.1 2 0 0 2 2 2 1 Small subunit of acetolactate synthase ACT_5 PF13710.1 gi|154150987|ref|YP_001404605.1| - 5.1e-22 77.4 0.3 1.6e-21 75.8 0.1 1.9 2 0 0 2 2 2 1 ACT domain ACT PF01842.20 gi|154150987|ref|YP_001404605.1| - 3.5e-15 55.1 2.5 1.5e-14 53.0 0.1 2.7 2 2 1 3 3 3 1 ACT domain ACT_4 PF13291.1 gi|154150987|ref|YP_001404605.1| - 3.1e-08 33.8 1.5 3.9e-08 33.5 0.2 1.7 2 0 0 2 2 2 1 ACT domain Saccharop_dh_N PF04455.7 gi|154150987|ref|YP_001404605.1| - 0.034 14.2 0.4 0.16 12.0 0.1 2.0 1 1 1 2 2 2 0 LOR/SDH bifunctional enzyme conserved region APG17 PF04108.7 gi|154150987|ref|YP_001404605.1| - 0.043 12.6 0.1 0.045 12.5 0.1 1.2 1 0 0 1 1 1 0 Autophagy protein Apg17 G8 PF10162.4 gi|154150987|ref|YP_001404605.1| - 0.065 13.0 0.0 0.13 12.0 0.0 1.6 1 0 0 1 1 1 0 G8 domain DUF503 PF04456.7 gi|154150987|ref|YP_001404605.1| - 0.079 12.5 0.2 0.16 11.5 0.1 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF503) Acylphosphatase PF00708.13 gi|154150987|ref|YP_001404605.1| - 0.085 12.9 0.7 0.54 10.3 0.1 2.3 2 1 1 3 3 3 0 Acylphosphatase Lactate_perm PF02652.9 gi|154150988|ref|YP_001404606.1| - 5.6e-54 183.5 53.2 4.4e-53 180.5 36.9 1.8 1 1 0 1 1 1 1 L-lactate permease Amino_oxidase PF01593.19 gi|154150989|ref|YP_001404607.1| - 5.6e-19 68.5 0.0 2e-12 46.9 0.0 2.2 2 0 0 2 2 2 2 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.1 gi|154150989|ref|YP_001404607.1| - 8.5e-12 44.9 0.1 1.7e-11 43.9 0.0 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.14 gi|154150989|ref|YP_001404607.1| - 0.001 18.2 0.1 0.0015 17.6 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain DAO PF01266.19 gi|154150989|ref|YP_001404607.1| - 0.0012 17.8 0.0 0.0022 16.9 0.0 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_3 PF13738.1 gi|154150989|ref|YP_001404607.1| - 0.018 15.1 0.0 0.96 9.4 0.0 2.4 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.19 gi|154150989|ref|YP_001404607.1| - 0.069 11.9 0.1 0.1 11.4 0.1 1.2 1 0 0 1 1 1 0 FAD binding domain Pyr_redox PF00070.22 gi|154150989|ref|YP_001404607.1| - 0.069 13.5 0.6 1.1 9.6 0.2 2.7 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.12 gi|154150989|ref|YP_001404607.1| - 0.17 10.9 0.1 0.31 10.1 0.1 1.3 1 0 0 1 1 1 0 Thi4 family Glycos_transf_2 PF00535.21 gi|154150990|ref|YP_001404608.1| - 5.6e-32 110.7 0.1 8.8e-32 110.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|154150990|ref|YP_001404608.1| - 9.7e-15 54.9 0.0 1.5e-14 54.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.4 gi|154150990|ref|YP_001404608.1| - 3.7e-11 42.6 0.0 5.5e-11 42.0 0.0 1.4 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.1 gi|154150990|ref|YP_001404608.1| - 4.3e-06 26.5 0.0 5.4e-06 26.2 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_transf_21 PF13506.1 gi|154150990|ref|YP_001404608.1| - 2.1e-05 23.9 0.0 3.5e-05 23.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_4 PF13704.1 gi|154150990|ref|YP_001404608.1| - 0.036 14.3 0.0 0.06 13.6 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 2 4HBT PF03061.17 gi|154150991|ref|YP_001404609.1| - 1.4e-07 31.5 1.6 2.3e-07 30.8 1.1 1.5 1 0 0 1 1 1 1 Thioesterase superfamily DUF4442 PF14539.1 gi|154150991|ref|YP_001404609.1| - 1.5e-05 24.9 0.0 2.5e-05 24.2 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4442) 4HBT_3 PF13622.1 gi|154150991|ref|YP_001404609.1| - 0.054 13.2 0.5 0.071 12.8 0.3 1.2 1 0 0 1 1 1 0 Thioesterase-like superfamily YiiD_Cterm PF09500.5 gi|154150991|ref|YP_001404609.1| - 0.1 12.1 0.0 4.7 6.7 0.0 2.5 2 1 0 2 2 2 0 Putative thioesterase (yiiD_Cterm) DUF2148 PF09918.4 gi|154150992|ref|YP_001404610.1| - 3.6e-32 109.8 0.6 3.6e-32 109.8 0.4 1.8 2 0 0 2 2 2 1 Uncharacterized protein containing a ferredoxin domain (DUF2148) FeS PF04060.8 gi|154150992|ref|YP_001404610.1| - 7.5e-08 31.8 3.6 1.6e-07 30.8 2.5 1.5 1 0 0 1 1 1 1 Putative Fe-S cluster His_Phos_1 PF00300.17 gi|154150993|ref|YP_001404611.1| - 2.7e-40 138.0 0.0 3.4e-40 137.7 0.0 1.1 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) GHMP_kinases_N PF00288.21 gi|154150994|ref|YP_001404612.1| - 9.3e-06 25.6 0.5 2.2e-05 24.4 0.3 1.6 1 0 0 1 1 1 1 GHMP kinases N terminal domain SNARE_assoc PF09335.6 gi|154150995|ref|YP_001404613.1| - 3.7e-21 75.5 7.5 3.7e-21 75.5 5.2 2.5 3 0 0 3 3 3 1 SNARE associated Golgi protein DUF871 PF05913.6 gi|154150995|ref|YP_001404613.1| - 0.15 10.8 0.0 0.21 10.4 0.0 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF871) NCU-G1 PF15065.1 gi|154150995|ref|YP_001404613.1| - 0.25 10.0 0.7 0.32 9.6 0.5 1.2 1 0 0 1 1 1 0 Lysosomal transcription factor, NCU-G1 PEGA PF08308.6 gi|154150996|ref|YP_001404614.1| - 9.6e-17 60.5 0.0 1.7e-16 59.7 0.0 1.4 1 0 0 1 1 1 1 PEGA domain CarboxypepD_reg PF13620.1 gi|154150996|ref|YP_001404614.1| - 0.00051 20.0 0.3 0.0037 17.2 0.0 2.3 2 0 0 2 2 2 1 Carboxypeptidase regulatory-like domain PTP_N PF12453.3 gi|154150996|ref|YP_001404614.1| - 0.0042 16.6 1.7 0.13 11.8 0.0 2.7 2 0 0 2 2 2 1 Protein tyrosine phosphatase N terminal PP_kinase_C PF13090.1 gi|154150997|ref|YP_001404615.1| - 5.4e-160 531.7 0.0 6.8e-160 531.4 0.0 1.1 1 0 0 1 1 1 1 Polyphosphate kinase C-terminal domain PP_kinase PF02503.12 gi|154150997|ref|YP_001404615.1| - 1.2e-69 233.9 0.1 1.8e-69 233.4 0.1 1.3 1 0 0 1 1 1 1 Polyphosphate kinase middle domain PP_kinase_N PF13089.1 gi|154150997|ref|YP_001404615.1| - 9e-36 122.2 0.0 1.6e-35 121.4 0.0 1.4 1 0 0 1 1 1 1 Polyphosphate kinase N-terminal domain PLDc_2 PF13091.1 gi|154150997|ref|YP_001404615.1| - 2.6e-08 33.6 0.0 0.00018 21.2 0.0 2.9 3 1 0 3 3 3 2 PLD-like domain CHAD PF05235.9 gi|154150998|ref|YP_001404616.1| - 3.5e-55 187.1 9.1 6.5e-55 186.2 6.3 1.5 1 0 0 1 1 1 1 CHAD domain HD PF01966.17 gi|154150998|ref|YP_001404616.1| - 2.2e-06 27.6 1.2 7.2e-06 26.0 0.1 2.3 2 0 0 2 2 2 1 HD domain Ppx-GppA PF02541.11 gi|154150999|ref|YP_001404617.1| - 2.5e-60 204.1 0.0 3.6e-60 203.5 0.0 1.2 1 0 0 1 1 1 1 Ppx/GppA phosphatase family HD PF01966.17 gi|154150999|ref|YP_001404617.1| - 5.6e-12 45.7 2.7 1.2e-11 44.6 1.9 1.6 1 0 0 1 1 1 1 HD domain FtsA PF14450.1 gi|154150999|ref|YP_001404617.1| - 0.00022 21.0 0.1 0.12 12.2 0.0 3.3 4 0 0 4 4 4 2 Cell division protein FtsA DDR PF08841.5 gi|154150999|ref|YP_001404617.1| - 0.042 12.6 0.0 0.078 11.7 0.0 1.4 1 0 0 1 1 1 0 Diol dehydratase reactivase ATPase-like domain DUF126 PF01989.11 gi|154151000|ref|YP_001404618.1| - 3.2e-37 126.0 0.4 4.7e-37 125.5 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF126 AAA PF00004.24 gi|154151001|ref|YP_001404619.1| - 3.1e-43 147.1 0.1 1e-42 145.4 0.0 1.9 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_2 PF07724.9 gi|154151001|ref|YP_001404619.1| - 1.8e-06 27.9 0.0 4.6e-06 26.6 0.0 1.7 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) RuvB_N PF05496.7 gi|154151001|ref|YP_001404619.1| - 2e-05 23.7 0.0 6.3e-05 22.1 0.0 1.8 2 0 0 2 2 2 1 Holliday junction DNA helicase ruvB N-terminus AAA_16 PF13191.1 gi|154151001|ref|YP_001404619.1| - 3.4e-05 23.9 0.1 0.00034 20.6 0.1 2.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.9 gi|154151001|ref|YP_001404619.1| - 0.0001 22.0 0.4 0.0027 17.4 0.3 2.8 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.1 gi|154151001|ref|YP_001404619.1| - 0.00039 20.5 0.2 0.0043 17.1 0.1 2.4 1 1 0 1 1 1 1 AAA domain TIP49 PF06068.8 gi|154151001|ref|YP_001404619.1| - 0.00087 18.1 0.1 0.0018 17.0 0.0 1.5 1 0 0 1 1 1 1 TIP49 C-terminus AAA_19 PF13245.1 gi|154151001|ref|YP_001404619.1| - 0.0012 18.5 0.0 0.0029 17.2 0.0 1.6 1 0 0 1 1 1 1 Part of AAA domain AAA_17 PF13207.1 gi|154151001|ref|YP_001404619.1| - 0.0018 19.1 1.0 0.0093 16.7 0.2 2.6 2 1 0 2 2 2 1 AAA domain IstB_IS21 PF01695.12 gi|154151001|ref|YP_001404619.1| - 0.002 17.5 0.1 0.005 16.2 0.0 1.6 1 0 0 1 1 1 1 IstB-like ATP binding protein CENP-F_N PF10481.4 gi|154151001|ref|YP_001404619.1| - 0.0022 17.4 5.4 0.0039 16.6 3.7 1.3 1 0 0 1 1 1 1 Cenp-F N-terminal domain Zeta_toxin PF06414.7 gi|154151001|ref|YP_001404619.1| - 0.003 16.7 0.3 0.0074 15.4 0.0 1.8 2 0 0 2 2 2 1 Zeta toxin DUF815 PF05673.8 gi|154151001|ref|YP_001404619.1| - 0.011 14.6 0.0 0.02 13.8 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_18 PF13238.1 gi|154151001|ref|YP_001404619.1| - 0.012 15.9 0.4 0.085 13.1 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_14 PF13173.1 gi|154151001|ref|YP_001404619.1| - 0.014 15.3 0.0 0.03 14.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.16 gi|154151001|ref|YP_001404619.1| - 0.025 13.7 0.1 0.058 12.5 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_25 PF13481.1 gi|154151001|ref|YP_001404619.1| - 0.026 13.9 1.4 0.46 9.8 0.1 2.8 2 1 1 3 3 3 0 AAA domain Sigma54_activat PF00158.21 gi|154151001|ref|YP_001404619.1| - 0.034 13.6 0.2 0.093 12.2 0.1 1.9 1 1 0 1 1 1 0 Sigma-54 interaction domain AAA_3 PF07726.6 gi|154151001|ref|YP_001404619.1| - 0.037 13.6 0.0 0.11 12.0 0.0 1.8 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DUF2075 PF09848.4 gi|154151001|ref|YP_001404619.1| - 0.041 12.8 0.7 0.055 12.4 0.0 1.5 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) NACHT PF05729.7 gi|154151001|ref|YP_001404619.1| - 0.042 13.5 0.0 2.1 7.9 0.0 2.4 1 1 1 2 2 2 0 NACHT domain DUF3166 PF11365.3 gi|154151001|ref|YP_001404619.1| - 0.047 14.1 2.6 0.13 12.7 1.8 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3166) AAA_33 PF13671.1 gi|154151001|ref|YP_001404619.1| - 0.049 13.5 0.1 0.15 11.9 0.0 2.0 1 1 0 1 1 1 0 AAA domain AAA_24 PF13479.1 gi|154151001|ref|YP_001404619.1| - 0.051 13.1 0.6 0.17 11.4 0.2 2.1 2 1 0 2 2 2 0 AAA domain KaiC PF06745.8 gi|154151001|ref|YP_001404619.1| - 0.059 12.4 0.2 0.28 10.2 0.1 2.1 1 1 1 2 2 2 0 KaiC RNA_helicase PF00910.17 gi|154151001|ref|YP_001404619.1| - 0.075 13.2 0.0 0.15 12.2 0.0 1.6 1 0 0 1 1 1 0 RNA helicase Parvo_NS1 PF01057.12 gi|154151001|ref|YP_001404619.1| - 0.078 11.8 0.1 0.2 10.4 0.0 1.6 2 0 0 2 2 2 0 Parvovirus non-structural protein NS1 AAA_28 PF13521.1 gi|154151001|ref|YP_001404619.1| - 0.18 11.7 1.3 0.2 11.5 0.0 1.8 2 0 0 2 2 1 0 AAA domain DUF972 PF06156.8 gi|154151001|ref|YP_001404619.1| - 0.19 12.1 2.0 0.89 9.9 1.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF972) bZIP_2 PF07716.10 gi|154151001|ref|YP_001404619.1| - 0.2 11.5 6.3 0.76 9.6 4.4 2.0 1 0 0 1 1 1 0 Basic region leucine zipper FKBP_C PF00254.23 gi|154151003|ref|YP_001404621.1| - 2.6e-12 46.6 0.0 3.9e-12 46.0 0.0 1.3 1 1 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase AAA PF00004.24 gi|154151004|ref|YP_001404622.1| - 1.1e-44 151.8 0.8 1.8e-44 151.1 0.0 1.8 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.1 gi|154151004|ref|YP_001404622.1| - 4.7e-08 33.2 3.0 0.00019 21.4 0.0 3.2 2 1 1 3 3 3 1 AAA ATPase domain RuvB_N PF05496.7 gi|154151004|ref|YP_001404622.1| - 5.6e-07 28.8 0.1 1.3e-06 27.6 0.0 1.6 1 1 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus AAA_2 PF07724.9 gi|154151004|ref|YP_001404622.1| - 9.5e-07 28.8 0.0 2e-06 27.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.1 gi|154151004|ref|YP_001404622.1| - 1.4e-06 28.4 1.5 0.00028 21.0 0.1 3.2 2 1 0 2 2 2 1 AAA domain AAA_5 PF07728.9 gi|154151004|ref|YP_001404622.1| - 5.4e-06 26.1 0.1 2.1e-05 24.2 0.0 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) DUF815 PF05673.8 gi|154151004|ref|YP_001404622.1| - 9.7e-05 21.4 0.1 0.00019 20.4 0.0 1.6 2 0 0 2 2 1 1 Protein of unknown function (DUF815) IstB_IS21 PF01695.12 gi|154151004|ref|YP_001404622.1| - 0.00014 21.2 0.0 0.0003 20.2 0.0 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_14 PF13173.1 gi|154151004|ref|YP_001404622.1| - 0.00017 21.4 0.0 0.00038 20.3 0.0 1.6 1 0 0 1 1 1 1 AAA domain TIP49 PF06068.8 gi|154151004|ref|YP_001404622.1| - 0.0003 19.6 0.0 0.00054 18.7 0.0 1.4 1 0 0 1 1 1 1 TIP49 C-terminus AAA_17 PF13207.1 gi|154151004|ref|YP_001404622.1| - 0.00039 21.2 0.7 0.0016 19.2 0.1 2.2 2 1 0 2 2 2 1 AAA domain AAA_19 PF13245.1 gi|154151004|ref|YP_001404622.1| - 0.00041 20.0 0.0 0.00087 18.9 0.0 1.5 1 0 0 1 1 1 1 Part of AAA domain AAA_28 PF13521.1 gi|154151004|ref|YP_001404622.1| - 0.0011 18.8 1.4 0.0029 17.5 0.0 2.2 2 1 0 2 2 2 1 AAA domain AAA_18 PF13238.1 gi|154151004|ref|YP_001404622.1| - 0.0029 17.9 0.2 0.0075 16.5 0.0 1.8 2 0 0 2 2 1 1 AAA domain KaiC PF06745.8 gi|154151004|ref|YP_001404622.1| - 0.0034 16.5 2.6 0.12 11.4 0.0 3.1 2 1 1 3 3 3 1 KaiC Zeta_toxin PF06414.7 gi|154151004|ref|YP_001404622.1| - 0.0048 16.0 0.0 0.011 14.7 0.0 1.6 1 0 0 1 1 1 1 Zeta toxin CENP-F_leu_zip PF10473.4 gi|154151004|ref|YP_001404622.1| - 0.0051 16.6 12.7 0.01 15.6 8.8 1.5 1 0 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 AAA_3 PF07726.6 gi|154151004|ref|YP_001404622.1| - 0.0056 16.2 0.0 0.014 15.0 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.17 gi|154151004|ref|YP_001404622.1| - 0.0072 16.4 0.0 0.015 15.4 0.0 1.5 1 0 0 1 1 1 1 RNA helicase Mg_chelatase PF01078.16 gi|154151004|ref|YP_001404622.1| - 0.008 15.3 0.0 0.017 14.3 0.0 1.4 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_33 PF13671.1 gi|154151004|ref|YP_001404622.1| - 0.0097 15.7 0.3 0.024 14.5 0.0 1.9 2 0 0 2 2 1 1 AAA domain AAA_24 PF13479.1 gi|154151004|ref|YP_001404622.1| - 0.018 14.6 1.1 0.027 14.0 0.0 1.8 2 0 0 2 2 1 0 AAA domain Sigma54_activ_2 PF14532.1 gi|154151004|ref|YP_001404622.1| - 0.019 15.0 0.1 0.065 13.2 0.0 1.9 2 0 0 2 2 1 0 Sigma-54 interaction domain AAA_25 PF13481.1 gi|154151004|ref|YP_001404622.1| - 0.02 14.3 4.1 0.1 11.9 0.1 2.6 2 1 1 3 3 3 0 AAA domain NTPase_1 PF03266.10 gi|154151004|ref|YP_001404622.1| - 0.02 14.6 0.6 0.076 12.7 0.0 2.1 2 1 0 2 2 2 0 NTPase Sigma54_activat PF00158.21 gi|154151004|ref|YP_001404622.1| - 0.023 14.1 0.1 0.15 11.5 0.0 2.2 2 1 0 2 2 2 0 Sigma-54 interaction domain PhoH PF02562.11 gi|154151004|ref|YP_001404622.1| - 0.026 13.7 0.0 0.05 12.8 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein AAA_11 PF13086.1 gi|154151004|ref|YP_001404622.1| - 0.032 13.8 1.2 0.75 9.3 0.0 2.2 2 0 0 2 2 2 0 AAA domain Parvo_NS1 PF01057.12 gi|154151004|ref|YP_001404622.1| - 0.033 13.0 0.0 0.064 12.1 0.0 1.4 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 NACHT PF05729.7 gi|154151004|ref|YP_001404622.1| - 0.034 13.8 0.5 0.31 10.6 0.0 2.5 2 1 1 3 3 2 0 NACHT domain ResIII PF04851.10 gi|154151004|ref|YP_001404622.1| - 0.047 13.5 1.3 3.6 7.3 0.0 2.3 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit NB-ARC PF00931.17 gi|154151004|ref|YP_001404622.1| - 0.047 12.5 0.5 0.078 11.8 0.0 1.6 2 0 0 2 2 2 0 NB-ARC domain Arch_ATPase PF01637.13 gi|154151004|ref|YP_001404622.1| - 0.068 12.8 1.1 0.24 11.0 0.0 2.3 2 1 0 2 2 2 0 Archaeal ATPase SPX PF03105.14 gi|154151004|ref|YP_001404622.1| - 0.08 12.7 3.0 0.14 11.8 2.1 1.3 1 0 0 1 1 1 0 SPX domain DUF2075 PF09848.4 gi|154151004|ref|YP_001404622.1| - 0.081 11.8 2.8 0.26 10.2 0.0 2.3 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) ABC_tran PF00005.22 gi|154151004|ref|YP_001404622.1| - 0.085 13.1 0.4 0.76 10.0 0.0 2.3 2 0 0 2 2 2 0 ABC transporter Vps4_C PF09336.5 gi|154151004|ref|YP_001404622.1| - 0.14 12.1 0.0 9.1 6.2 0.0 3.1 3 0 0 3 3 3 0 Vps4 C terminal oligomerisation domain AAA_30 PF13604.1 gi|154151004|ref|YP_001404622.1| - 0.17 11.4 3.2 0.17 11.4 0.0 2.3 2 1 0 2 2 2 0 AAA domain DUF3450 PF11932.3 gi|154151004|ref|YP_001404622.1| - 0.18 11.0 5.4 0.29 10.3 3.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3450) YlqD PF11068.3 gi|154151004|ref|YP_001404622.1| - 0.24 11.4 5.4 0.38 10.7 3.0 1.8 2 0 0 2 2 1 0 YlqD protein Bac_DnaA PF00308.13 gi|154151004|ref|YP_001404622.1| - 0.48 10.0 2.4 1.2 8.7 0.0 2.4 3 0 0 3 3 3 0 Bacterial dnaA protein APG6 PF04111.7 gi|154151004|ref|YP_001404622.1| - 0.61 9.0 8.3 0.98 8.4 5.8 1.2 1 0 0 1 1 1 0 Autophagy protein Apg6 DUF724 PF05266.9 gi|154151004|ref|YP_001404622.1| - 0.89 9.1 8.1 1.5 8.4 5.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) DUF972 PF06156.8 gi|154151004|ref|YP_001404622.1| - 1.4 9.2 6.0 5.2 7.4 3.7 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF972) IncA PF04156.9 gi|154151004|ref|YP_001404622.1| - 3.8 7.0 12.7 7.9 6.0 8.8 1.4 1 0 0 1 1 1 0 IncA protein DUF919 PF06034.6 gi|154151004|ref|YP_001404622.1| - 9.8 5.8 9.3 3.4 7.3 3.5 2.3 1 1 1 2 2 2 0 Nucleopolyhedrovirus protein of unknown function (DUF919) HTH_3 PF01381.17 gi|154151005|ref|YP_001404623.1| - 2.1e-08 33.8 1.2 3.6e-08 33.1 0.8 1.4 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.2 gi|154151005|ref|YP_001404623.1| - 2.6e-08 33.7 0.5 1.1e-07 31.7 0.5 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_31 PF13560.1 gi|154151005|ref|YP_001404623.1| - 2.4e-05 24.4 0.0 4.2e-05 23.6 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.1 gi|154151005|ref|YP_001404623.1| - 9.7e-05 21.9 1.1 0.00016 21.2 0.8 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain SurA_N_3 PF13624.1 gi|154151005|ref|YP_001404623.1| - 0.05 13.5 0.8 0.073 13.0 0.5 1.2 1 0 0 1 1 1 0 SurA N-terminal domain PAS_9 PF13426.1 gi|154151006|ref|YP_001404624.1| - 2.9e-48 162.5 0.3 4e-16 59.2 0.1 4.5 4 0 0 4 4 4 3 PAS domain PAS PF00989.19 gi|154151006|ref|YP_001404624.1| - 5e-41 139.0 0.4 1.5e-14 53.7 0.0 5.0 4 1 0 4 4 4 3 PAS fold PAS_4 PF08448.5 gi|154151006|ref|YP_001404624.1| - 2.1e-27 95.2 0.5 2.1e-09 37.4 0.1 4.4 3 1 0 3 3 3 3 PAS fold Response_reg PF00072.19 gi|154151006|ref|YP_001404624.1| - 8.8e-21 74.0 0.0 7.3e-20 71.0 0.0 2.4 2 0 0 2 2 2 1 Response regulator receiver domain PAS_8 PF13188.1 gi|154151006|ref|YP_001404624.1| - 1.1e-17 63.1 0.1 3.2e-05 23.6 0.0 4.5 4 0 0 4 4 4 3 PAS domain HATPase_c PF02518.21 gi|154151006|ref|YP_001404624.1| - 3e-13 49.4 0.0 7.4e-13 48.1 0.0 1.7 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_3 PF08447.6 gi|154151006|ref|YP_001404624.1| - 2.2e-11 43.6 0.0 0.00022 21.2 0.0 5.1 4 2 0 4 4 4 2 PAS fold SPOB_a PF14689.1 gi|154151006|ref|YP_001404624.1| - 0.082 12.4 0.2 0.22 11.0 0.1 1.7 1 0 0 1 1 1 0 Sensor_kinase_SpoOB-type, alpha-helical domain CbiG_C PF01890.11 gi|154151006|ref|YP_001404624.1| - 0.11 12.7 0.2 0.49 10.6 0.0 2.1 3 0 0 3 3 3 0 Cobalamin synthesis G C-terminus HisKA PF00512.20 gi|154151006|ref|YP_001404624.1| - 0.18 11.7 3.8 1.7 8.7 0.0 3.0 2 1 0 2 2 2 0 His Kinase A (phospho-acceptor) domain Response_reg PF00072.19 gi|154151007|ref|YP_001404625.1| - 4.4e-28 97.5 0.3 1.1e-27 96.2 0.2 1.7 1 0 0 1 1 1 1 Response regulator receiver domain HATPase_c PF02518.21 gi|154151007|ref|YP_001404625.1| - 4.3e-23 81.1 0.0 9.6e-23 80.0 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GAF_2 PF13185.1 gi|154151007|ref|YP_001404625.1| - 1.4e-12 48.2 0.0 4e-12 46.8 0.0 1.8 1 0 0 1 1 1 1 GAF domain GAF_3 PF13492.1 gi|154151007|ref|YP_001404625.1| - 9e-12 45.2 0.0 1.7e-11 44.3 0.0 1.5 1 0 0 1 1 1 1 GAF domain HATPase_c_5 PF14501.1 gi|154151007|ref|YP_001404625.1| - 1.8e-06 27.6 0.0 0.00045 19.8 0.0 2.8 2 0 0 2 2 2 1 GHKL domain GAF PF01590.21 gi|154151007|ref|YP_001404625.1| - 1.4e-05 25.2 0.0 2.5e-05 24.4 0.0 1.5 1 0 0 1 1 1 1 GAF domain HATPase_c_2 PF13581.1 gi|154151007|ref|YP_001404625.1| - 0.00016 21.4 0.0 0.00039 20.2 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.1 gi|154151007|ref|YP_001404625.1| - 0.0022 17.6 0.0 0.0045 16.6 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HisKA PF00512.20 gi|154151007|ref|YP_001404625.1| - 0.093 12.7 0.7 0.34 10.9 0.5 2.0 1 0 0 1 1 1 0 His Kinase A (phospho-acceptor) domain AA_permease_2 PF13520.1 gi|154151008|ref|YP_001404626.1| - 1.6e-56 191.6 54.6 2.2e-56 191.1 37.8 1.2 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.16 gi|154151008|ref|YP_001404626.1| - 1.4e-40 139.1 53.6 1.8e-40 138.7 37.2 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_C PF13906.1 gi|154151008|ref|YP_001404626.1| - 3.1e-14 52.5 7.1 3.1e-14 52.5 4.9 4.4 4 0 0 4 4 4 1 C-terminus of AA_permease Spore_permease PF03845.8 gi|154151008|ref|YP_001404626.1| - 0.18 10.3 31.1 0.034 12.8 16.7 2.6 2 1 0 2 2 2 0 Spore germination protein DUF2633 PF11119.3 gi|154151008|ref|YP_001404626.1| - 0.33 10.6 1.8 1.4 8.6 1.3 2.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2633) FMN_red PF03358.10 gi|154151009|ref|YP_001404627.1| - 2.6e-34 117.9 0.0 3.2e-34 117.6 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|154151009|ref|YP_001404627.1| - 6.7e-06 25.7 0.0 1.1e-05 25.0 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin-like fold FMN_red PF03358.10 gi|154151010|ref|YP_001404628.1| - 3.7e-19 68.7 0.0 5e-19 68.3 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|154151010|ref|YP_001404628.1| - 4e-11 42.7 0.0 4.5e-11 42.6 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold Fer4_7 PF12838.2 gi|154151012|ref|YP_001404630.1| - 3.5e-18 65.7 33.4 8.7e-11 42.0 8.4 1.9 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4 PF00037.22 gi|154151012|ref|YP_001404630.1| - 7.5e-17 60.1 13.4 4.8e-10 38.6 1.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|154151012|ref|YP_001404630.1| - 2.9e-12 45.8 12.7 5.4e-08 32.3 1.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.2 gi|154151012|ref|YP_001404630.1| - 5e-11 41.8 12.2 2e-06 27.3 1.9 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|154151012|ref|YP_001404630.1| - 1.1e-10 41.5 8.1 3e-10 40.2 5.7 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|154151012|ref|YP_001404630.1| - 1.4e-10 41.7 4.0 1.9e-10 41.3 2.8 1.2 1 0 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_21 PF14697.1 gi|154151012|ref|YP_001404630.1| - 2e-10 40.3 7.8 4.6e-10 39.2 5.4 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|154151012|ref|YP_001404630.1| - 2.8e-09 36.6 18.8 5.6e-07 29.2 7.5 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|154151012|ref|YP_001404630.1| - 3.9e-09 36.9 3.4 0.00037 20.9 0.2 2.2 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_4 PF12800.2 gi|154151012|ref|YP_001404630.1| - 5.8e-09 35.5 11.6 0.00011 22.2 1.1 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|154151012|ref|YP_001404630.1| - 1.5e-08 34.8 18.8 1.2e-06 28.7 6.0 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|154151012|ref|YP_001404630.1| - 1.6e-08 34.4 7.7 4.3e-08 33.0 5.5 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|154151012|ref|YP_001404630.1| - 8.2e-07 29.3 9.8 0.0042 17.4 2.2 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|154151012|ref|YP_001404630.1| - 5.5e-05 23.4 6.7 0.012 16.0 0.2 2.3 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|154151012|ref|YP_001404630.1| - 0.0001 22.5 24.3 0.0037 17.7 6.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_11 PF13247.1 gi|154151012|ref|YP_001404630.1| - 0.00061 19.6 2.6 0.12 12.2 0.1 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_19 PF06902.6 gi|154151012|ref|YP_001404630.1| - 0.082 12.7 9.2 0.56 10.0 0.3 2.5 2 1 1 3 3 3 0 Divergent 4Fe-4S mono-cluster Fer4_20 PF14691.1 gi|154151012|ref|YP_001404630.1| - 1.8 8.2 7.6 4.2 7.0 5.2 1.5 1 1 0 1 1 1 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Enterotoxin_HS1 PF08090.6 gi|154151012|ref|YP_001404630.1| - 5.7 6.7 7.8 9 6.1 0.6 2.2 2 0 0 2 2 2 0 Heat stable E.coli enterotoxin 1 Molydop_binding PF01568.16 gi|154151013|ref|YP_001404631.1| - 2.7e-14 52.8 0.0 3.3e-14 52.6 0.0 1.1 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdopterin PF00384.17 gi|154151014|ref|YP_001404632.1| - 3e-10 39.4 0.0 1.9e-07 30.2 0.0 2.9 3 0 0 3 3 3 2 Molybdopterin oxidoreductase TPP_enzyme_M PF00205.17 gi|154151014|ref|YP_001404632.1| - 0.00063 19.5 0.1 4.5 7.0 0.0 3.6 3 1 0 3 3 3 2 Thiamine pyrophosphate enzyme, central domain Molybdop_Fe4S4 PF04879.11 gi|154151014|ref|YP_001404632.1| - 0.076 12.8 0.5 0.26 11.1 0.1 2.0 2 0 0 2 2 2 0 Molybdopterin oxidoreductase Fe4S4 domain Amidohydro_3 PF07969.6 gi|154151015|ref|YP_001404633.1| - 2.5e-55 188.3 0.3 3e-55 188.0 0.2 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_5 PF13594.1 gi|154151015|ref|YP_001404633.1| - 3.1e-10 39.7 0.0 9.6e-10 38.1 0.0 1.9 1 0 0 1 1 1 1 Amidohydrolase Amidohydro_4 PF13147.1 gi|154151015|ref|YP_001404633.1| - 2.9e-06 27.5 0.1 0.049 13.6 0.0 2.7 2 1 0 2 2 2 2 Amidohydrolase Amidohydro_1 PF01979.15 gi|154151015|ref|YP_001404633.1| - 0.00021 21.0 0.1 0.029 14.0 0.0 2.4 2 0 0 2 2 2 2 Amidohydrolase family GXGXG PF01493.14 gi|154151016|ref|YP_001404634.1| - 4e-33 114.1 20.3 6.2e-33 113.5 14.0 1.3 1 0 0 1 1 1 1 GXGXG motif Nitroreductase PF00881.19 gi|154151017|ref|YP_001404635.1| - 1.8e-18 66.9 0.0 2.3e-18 66.5 0.0 1.1 1 0 0 1 1 1 1 Nitroreductase family NIR_SIR PF01077.17 gi|154151018|ref|YP_001404636.1| - 1.6e-20 73.0 0.1 2.1e-20 72.6 0.1 1.1 1 0 0 1 1 1 1 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.12 gi|154151018|ref|YP_001404636.1| - 2e-20 72.1 0.0 1.2e-19 69.6 0.0 2.1 2 0 0 2 2 2 1 Nitrite/Sulfite reductase ferredoxin-like half domain Fer4 PF00037.22 gi|154151018|ref|YP_001404636.1| - 1.5e-09 37.0 9.8 0.00025 20.5 1.9 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.2 gi|154151018|ref|YP_001404636.1| - 1.3e-07 31.8 8.2 1.3e-07 31.8 5.7 2.2 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|154151018|ref|YP_001404636.1| - 7.7e-07 29.0 4.8 0.02 14.9 0.0 2.9 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|154151018|ref|YP_001404636.1| - 1.1e-06 28.7 9.4 1.1e-06 28.7 6.5 2.1 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|154151018|ref|YP_001404636.1| - 1.7e-06 27.6 11.6 0.00045 19.9 0.2 2.9 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|154151018|ref|YP_001404636.1| - 6.3e-06 25.8 21.7 3.6e-05 23.4 8.0 2.4 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|154151018|ref|YP_001404636.1| - 3.9e-05 23.9 10.2 0.048 14.0 1.4 3.3 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|154151018|ref|YP_001404636.1| - 0.00045 19.9 18.8 0.017 15.0 1.4 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_11 PF13247.1 gi|154151018|ref|YP_001404636.1| - 0.00097 18.9 3.8 0.0024 17.7 2.3 1.8 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_15 PF13459.1 gi|154151018|ref|YP_001404636.1| - 0.0013 19.2 10.0 0.072 13.6 0.0 3.5 3 1 0 3 3 3 2 4Fe-4S single cluster domain Fer4_21 PF14697.1 gi|154151018|ref|YP_001404636.1| - 0.0055 16.5 11.2 0.0055 16.5 7.7 2.5 1 1 2 3 3 3 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|154151018|ref|YP_001404636.1| - 0.011 16.0 19.6 0.025 14.8 2.1 3.2 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_16 PF13484.1 gi|154151018|ref|YP_001404636.1| - 0.017 15.8 12.4 13 6.5 8.6 2.7 1 1 0 1 1 1 0 4Fe-4S double cluster binding domain GcpE PF04551.9 gi|154151018|ref|YP_001404636.1| - 1 8.1 4.7 0.14 10.9 0.2 1.8 1 1 1 2 2 2 0 GcpE protein Fer4_18 PF13746.1 gi|154151018|ref|YP_001404636.1| - 1.2 9.6 18.2 0.96 9.9 1.9 3.0 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|154151018|ref|YP_001404636.1| - 3.8 8.3 25.1 0.13 12.8 2.5 3.3 4 0 0 4 4 3 0 4Fe-4S binding domain CHD5 PF04420.9 gi|154151019|ref|YP_001404637.1| - 0.00074 19.2 0.7 0.0013 18.4 0.3 1.5 1 1 0 1 1 1 1 CHD5-like protein Herpes_UL92 PF03048.9 gi|154151019|ref|YP_001404637.1| - 0.079 12.5 0.0 0.084 12.4 0.0 1.1 1 0 0 1 1 1 0 UL92 family DUF2927 PF11150.3 gi|154151020|ref|YP_001404638.1| - 0.001 18.7 0.0 0.0033 17.1 0.0 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF2927) Response_reg PF00072.19 gi|154151021|ref|YP_001404639.1| - 7.6e-21 74.2 0.3 1.2e-20 73.5 0.2 1.3 1 0 0 1 1 1 1 Response regulator receiver domain DEC-1_N PF04625.8 gi|154151021|ref|YP_001404639.1| - 0.051 12.2 1.0 0.054 12.1 0.1 1.4 2 0 0 2 2 2 0 DEC-1 protein, N-terminal region Glyco_transf_22 PF03901.12 gi|154151021|ref|YP_001404639.1| - 0.16 10.8 0.1 0.22 10.4 0.0 1.1 1 0 0 1 1 1 0 Alg9-like mannosyltransferase family PEGA PF08308.6 gi|154151022|ref|YP_001404640.1| - 1.6e-06 27.7 1.1 5.2e-06 26.1 0.8 1.8 1 1 0 1 1 1 1 PEGA domain CarboxypepD_reg PF13620.1 gi|154151022|ref|YP_001404640.1| - 2.9e-06 27.2 0.3 2.2e-05 24.4 0.3 2.2 2 0 0 2 2 2 1 Carboxypeptidase regulatory-like domain DUF4480 PF13715.1 gi|154151022|ref|YP_001404640.1| - 0.0013 18.6 0.0 0.0032 17.4 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4480) Peptidase_M64 PF09471.5 gi|154151022|ref|YP_001404640.1| - 0.017 14.8 0.3 0.11 12.1 0.0 2.4 3 0 0 3 3 3 0 IgA Peptidase M64 DUF3494 PF11999.3 gi|154151023|ref|YP_001404641.1| - 0 1043.9 194.7 2e-67 226.8 19.0 7.7 7 1 0 7 7 7 5 Protein of unknown function (DUF3494) Transglut_core3 PF13471.1 gi|154151024|ref|YP_001404642.1| - 0.015 15.0 0.0 0.026 14.3 0.0 1.4 1 0 0 1 1 1 0 Transglutaminase-like superfamily EB PF01683.13 gi|154151024|ref|YP_001404642.1| - 0.3 11.2 26.0 1.9 8.5 8.8 2.6 1 1 1 2 2 2 0 EB module Response_reg PF00072.19 gi|154151025|ref|YP_001404643.1| - 7.2e-21 74.2 0.6 3.1e-20 72.2 0.0 2.3 3 0 0 3 3 3 1 Response regulator receiver domain HATPase_c PF02518.21 gi|154151025|ref|YP_001404643.1| - 5.3e-14 51.8 0.1 1.6e-13 50.3 0.1 1.8 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GAF_2 PF13185.1 gi|154151025|ref|YP_001404643.1| - 7.3e-11 42.7 0.0 1.6e-10 41.6 0.0 1.6 1 0 0 1 1 1 1 GAF domain PAS_8 PF13188.1 gi|154151025|ref|YP_001404643.1| - 3.2e-08 33.1 0.2 1.7e-07 30.8 0.0 2.4 2 0 0 2 2 2 1 PAS domain PAS_9 PF13426.1 gi|154151025|ref|YP_001404643.1| - 1.4e-06 28.5 0.1 1e-05 25.8 0.0 2.5 3 0 0 3 3 3 1 PAS domain PAS PF00989.19 gi|154151025|ref|YP_001404643.1| - 7.3e-05 22.5 0.0 0.00025 20.8 0.0 2.0 1 1 0 1 1 1 1 PAS fold OKR_DC_1_N PF03709.10 gi|154151025|ref|YP_001404643.1| - 0.00025 21.0 0.0 0.005 16.8 0.0 3.1 4 0 0 4 4 4 1 Orn/Lys/Arg decarboxylase, N-terminal domain PAS_4 PF08448.5 gi|154151025|ref|YP_001404643.1| - 0.0037 17.2 0.0 0.015 15.2 0.0 2.1 2 0 0 2 2 2 1 PAS fold SPOB_a PF14689.1 gi|154151025|ref|YP_001404643.1| - 0.03 13.9 0.2 0.14 11.7 0.0 2.0 2 0 0 2 2 2 0 Sensor_kinase_SpoOB-type, alpha-helical domain DUF1241 PF06840.6 gi|154151025|ref|YP_001404643.1| - 0.035 13.3 0.0 0.1 11.8 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1241) Ca_hom_mod PF14798.1 gi|154151026|ref|YP_001404644.1| - 0.025 13.5 0.1 0.027 13.4 0.1 1.0 1 0 0 1 1 1 0 Calcium homeostasis modulator KaiC PF06745.8 gi|154151027|ref|YP_001404645.1| - 4.9e-105 349.6 0.0 7.7e-65 218.1 0.0 2.1 2 0 0 2 2 2 2 KaiC AAA_25 PF13481.1 gi|154151027|ref|YP_001404645.1| - 1.6e-21 76.6 0.0 1.9e-11 43.7 0.0 2.4 2 0 0 2 2 2 2 AAA domain IstB_IS21 PF01695.12 gi|154151027|ref|YP_001404645.1| - 4.6e-08 32.6 0.0 0.00048 19.5 0.0 2.4 2 0 0 2 2 2 2 IstB-like ATP binding protein RecA PF00154.16 gi|154151027|ref|YP_001404645.1| - 9.9e-08 31.4 0.0 0.00064 18.8 0.0 2.2 2 0 0 2 2 2 2 recA bacterial DNA recombination protein AAA_16 PF13191.1 gi|154151027|ref|YP_001404645.1| - 1e-07 32.1 0.0 0.00015 21.8 0.0 2.5 2 0 0 2 2 2 2 AAA ATPase domain GvpD PF07088.6 gi|154151027|ref|YP_001404645.1| - 1.7e-07 29.9 0.5 0.0024 16.2 0.1 3.7 3 1 0 3 3 3 2 GvpD gas vesicle protein DnaB_C PF03796.10 gi|154151027|ref|YP_001404645.1| - 2.4e-07 29.9 1.6 0.0015 17.4 0.0 2.6 3 0 0 3 3 2 2 DnaB-like helicase C terminal domain AAA_19 PF13245.1 gi|154151027|ref|YP_001404645.1| - 6.1e-07 29.1 0.0 0.033 13.9 0.0 2.5 2 0 0 2 2 2 2 Part of AAA domain NACHT PF05729.7 gi|154151027|ref|YP_001404645.1| - 1.2e-05 25.0 0.0 0.017 14.7 0.0 2.3 2 0 0 2 2 2 2 NACHT domain AAA PF00004.24 gi|154151027|ref|YP_001404645.1| - 1.6e-05 25.1 0.2 0.063 13.4 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) DUF2075 PF09848.4 gi|154151027|ref|YP_001404645.1| - 8.3e-05 21.7 0.0 0.077 11.9 0.0 2.3 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) AAA_22 PF13401.1 gi|154151027|ref|YP_001404645.1| - 0.00011 22.3 0.5 0.11 12.6 0.0 2.9 3 0 0 3 3 2 1 AAA domain AAA_14 PF13173.1 gi|154151027|ref|YP_001404645.1| - 0.00034 20.5 0.0 0.55 10.1 0.0 2.4 2 0 0 2 2 2 2 AAA domain ATP-synt_ab PF00006.20 gi|154151027|ref|YP_001404645.1| - 0.00054 19.5 0.0 0.11 12.0 0.0 2.3 2 0 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain AAA_24 PF13479.1 gi|154151027|ref|YP_001404645.1| - 0.0012 18.4 0.0 0.022 14.3 0.0 2.5 3 0 0 3 3 2 1 AAA domain RNA_helicase PF00910.17 gi|154151027|ref|YP_001404645.1| - 0.0013 18.8 0.0 1.4 9.1 0.0 2.6 2 0 0 2 2 2 1 RNA helicase ResIII PF04851.10 gi|154151027|ref|YP_001404645.1| - 0.002 17.9 0.0 0.066 13.0 0.0 2.4 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit Sigma54_activat PF00158.21 gi|154151027|ref|YP_001404645.1| - 0.0054 16.2 0.1 0.11 11.9 0.0 2.3 2 0 0 2 2 2 1 Sigma-54 interaction domain Zot PF05707.7 gi|154151027|ref|YP_001404645.1| - 0.011 15.2 0.0 4.3 6.7 0.0 2.4 2 0 0 2 2 2 0 Zonular occludens toxin (Zot) Zeta_toxin PF06414.7 gi|154151027|ref|YP_001404645.1| - 0.016 14.3 0.1 0.45 9.5 0.0 2.3 2 0 0 2 2 2 0 Zeta toxin AAA_18 PF13238.1 gi|154151027|ref|YP_001404645.1| - 0.019 15.3 0.9 1.9 8.8 0.0 2.9 3 0 0 3 3 3 0 AAA domain FtsK_SpoIIIE PF01580.13 gi|154151027|ref|YP_001404645.1| - 0.021 14.3 0.1 1.1 8.6 0.0 2.6 2 0 0 2 2 2 0 FtsK/SpoIIIE family AAA_11 PF13086.1 gi|154151027|ref|YP_001404645.1| - 0.021 14.4 0.0 4 6.9 0.0 2.6 2 1 0 2 2 2 0 AAA domain T2SE PF00437.15 gi|154151027|ref|YP_001404645.1| - 0.024 13.5 0.0 0.32 9.8 0.0 2.2 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_5 PF07728.9 gi|154151027|ref|YP_001404645.1| - 0.037 13.7 0.0 5.8 6.6 0.0 2.5 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) UvrD-helicase PF00580.16 gi|154151027|ref|YP_001404645.1| - 0.04 13.2 0.1 7.4 5.7 0.1 2.4 2 0 0 2 2 2 0 UvrD/REP helicase N-terminal domain CbiA PF01656.18 gi|154151027|ref|YP_001404645.1| - 0.041 13.2 0.2 3.1 7.1 0.0 2.8 2 1 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain TrwB_AAD_bind PF10412.4 gi|154151027|ref|YP_001404645.1| - 0.05 12.2 0.0 0.22 10.0 0.0 1.9 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain AAA_10 PF12846.2 gi|154151027|ref|YP_001404645.1| - 0.051 12.9 0.0 2.8 7.3 0.0 2.3 2 0 0 2 2 2 0 AAA-like domain Rad51 PF08423.6 gi|154151027|ref|YP_001404645.1| - 0.065 12.1 0.6 3.8 6.3 0.1 2.4 2 0 0 2 2 2 0 Rad51 PhoH PF02562.11 gi|154151027|ref|YP_001404645.1| - 0.066 12.4 0.2 1.4 8.0 0.0 2.4 2 0 0 2 2 2 0 PhoH-like protein AAA_28 PF13521.1 gi|154151027|ref|YP_001404645.1| - 0.08 12.8 0.0 11 5.9 0.0 2.6 2 0 0 2 2 2 0 AAA domain DEAD PF00270.24 gi|154151027|ref|YP_001404645.1| - 0.081 12.4 0.0 2.2 7.7 0.0 2.5 2 1 0 2 2 2 0 DEAD/DEAH box helicase Viral_helicase1 PF01443.13 gi|154151027|ref|YP_001404645.1| - 0.092 12.2 0.0 5.4 6.4 0.0 2.4 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase AAA_30 PF13604.1 gi|154151027|ref|YP_001404645.1| - 0.096 12.2 0.0 0.58 9.7 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.1 gi|154151027|ref|YP_001404645.1| - 0.17 11.4 0.3 2.6 7.6 0.1 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain PAXNEB PF05625.6 gi|154151027|ref|YP_001404645.1| - 0.37 9.5 4.8 5.4 5.7 0.2 2.2 2 0 0 2 2 2 0 PAXNEB protein ABC_tran PF00005.22 gi|154151027|ref|YP_001404645.1| - 3.2 8.0 4.6 3.8 7.8 0.0 2.8 3 0 0 3 3 3 0 ABC transporter AAA_17 PF13207.1 gi|154151027|ref|YP_001404645.1| - 7 7.4 12.5 2.2 9.1 0.6 3.5 3 1 0 3 3 3 0 AAA domain AAA_23 PF13476.1 gi|154151027|ref|YP_001404645.1| - 9 6.5 7.9 6.7 6.9 0.1 2.5 3 0 0 3 3 2 0 AAA domain KaiB PF07689.7 gi|154151028|ref|YP_001404646.1| - 8e-29 98.9 0.1 1.1e-28 98.4 0.1 1.2 1 0 0 1 1 1 1 KaiB domain KaiB PF07689.7 gi|154151029|ref|YP_001404647.1| - 2.5e-20 71.6 0.0 3.5e-20 71.2 0.0 1.2 1 0 0 1 1 1 1 KaiB domain SLA_LP_auto_ag PF05889.8 gi|154151029|ref|YP_001404647.1| - 0.044 12.2 0.0 0.047 12.1 0.0 1.2 1 0 0 1 1 1 0 Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen) DUF3883 PF13020.1 gi|154151029|ref|YP_001404647.1| - 0.13 12.0 0.1 0.21 11.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3883) PAS_4 PF08448.5 gi|154151030|ref|YP_001404648.1| - 2.2e-51 172.5 0.0 5.5e-14 52.1 0.0 5.9 5 1 0 5 5 5 5 PAS fold PAS_9 PF13426.1 gi|154151030|ref|YP_001404648.1| - 1.1e-50 170.3 0.6 7.6e-15 55.1 0.0 6.0 6 0 0 6 6 5 5 PAS domain PAS PF00989.19 gi|154151030|ref|YP_001404648.1| - 4.2e-42 142.4 0.0 2.6e-14 52.9 0.0 5.7 6 0 0 6 6 6 4 PAS fold PAS_8 PF13188.1 gi|154151030|ref|YP_001404648.1| - 2.2e-25 87.5 0.0 2.6e-06 27.0 0.0 5.3 5 0 0 5 5 5 4 PAS domain HisKA_2 PF07568.7 gi|154151030|ref|YP_001404648.1| - 6.8e-19 67.5 1.3 2.8e-18 65.5 0.9 2.1 1 0 0 1 1 1 1 Histidine kinase PAS_7 PF12860.2 gi|154151030|ref|YP_001404648.1| - 2.2e-18 66.3 0.1 1.1e-06 28.5 0.0 6.4 6 1 0 6 6 6 2 PAS fold PAS_3 PF08447.6 gi|154151030|ref|YP_001404648.1| - 2.5e-17 62.7 0.0 2.1e-06 27.7 0.0 4.7 4 1 0 4 4 4 3 PAS fold PAS_10 PF13596.1 gi|154151030|ref|YP_001404648.1| - 7.4e-13 48.6 0.1 0.034 14.4 0.0 5.2 6 0 0 6 6 5 3 PAS domain HATPase_c PF02518.21 gi|154151030|ref|YP_001404648.1| - 3.9e-10 39.4 0.4 1.1e-09 37.9 0.0 2.0 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.1 gi|154151030|ref|YP_001404648.1| - 3.6e-07 30.0 0.0 9.2e-07 28.6 0.0 1.7 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HWE_HK PF07536.9 gi|154151030|ref|YP_001404648.1| - 7.3e-06 26.3 0.3 3.3e-05 24.2 0.2 2.2 1 0 0 1 1 1 1 HWE histidine kinase HATPase_c_3 PF13589.1 gi|154151030|ref|YP_001404648.1| - 0.021 14.4 0.1 0.049 13.2 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Cache_3 PF14827.1 gi|154151030|ref|YP_001404648.1| - 0.043 13.6 0.0 16 5.4 0.0 4.5 5 0 0 5 5 5 0 Sensory domain of two-component sensor kinase DUF1962 PF09227.5 gi|154151030|ref|YP_001404648.1| - 0.17 11.9 0.0 0.44 10.6 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1962) YscO PF07321.7 gi|154151030|ref|YP_001404648.1| - 0.19 11.5 4.7 1.6 8.5 0.2 2.9 3 0 0 3 3 3 0 Type III secretion protein YscO TBPIP PF07106.8 gi|154151030|ref|YP_001404648.1| - 1.2 8.6 6.9 0.66 9.4 0.1 3.2 3 1 0 3 3 3 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) Response_reg PF00072.19 gi|154151031|ref|YP_001404649.1| - 5.9e-21 74.5 0.4 1.7e-20 73.0 0.2 1.9 2 0 0 2 2 2 1 Response regulator receiver domain PadR PF03551.9 gi|154151031|ref|YP_001404649.1| - 7.3e-08 32.0 0.1 2.1e-07 30.5 0.1 1.9 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family Penicillinase_R PF03965.11 gi|154151031|ref|YP_001404649.1| - 0.023 14.7 0.0 0.13 12.3 0.0 2.1 1 1 1 2 2 2 0 Penicillinase repressor TrmB PF01978.14 gi|154151031|ref|YP_001404649.1| - 0.036 13.7 0.1 0.22 11.2 0.0 2.2 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB Peptidase_C13 PF01650.13 gi|154151032|ref|YP_001404650.1| - 1.3e-46 158.9 0.0 2.1e-46 158.3 0.0 1.2 1 0 0 1 1 1 1 Peptidase C13 family Peripla_BP_6 PF13458.1 gi|154151032|ref|YP_001404650.1| - 2.7e-33 115.7 3.2 5.9e-33 114.6 2.2 1.5 1 0 0 1 1 1 1 Periplasmic binding protein ANF_receptor PF01094.23 gi|154151032|ref|YP_001404650.1| - 1e-15 57.3 0.0 1.9e-15 56.5 0.0 1.4 1 0 0 1 1 1 1 Receptor family ligand binding region Peripla_BP_5 PF13433.1 gi|154151032|ref|YP_001404650.1| - 6.2e-10 38.3 0.0 9.2e-10 37.7 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein domain MscL PF01741.13 gi|154151033|ref|YP_001404651.1| - 7.6e-18 64.8 8.1 9.7e-18 64.5 5.6 1.2 1 0 0 1 1 1 1 Large-conductance mechanosensitive channel, MscL DegT_DnrJ_EryC1 PF01041.12 gi|154151033|ref|YP_001404651.1| - 0.0082 15.2 0.0 0.0094 15.0 0.0 1.1 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family DUF2798 PF11391.3 gi|154151033|ref|YP_001404651.1| - 0.013 15.2 3.7 0.18 11.5 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2798) Colicin_V PF02674.11 gi|154151033|ref|YP_001404651.1| - 0.45 10.3 8.0 2.7 7.8 5.5 1.8 1 1 0 1 1 1 0 Colicin V production protein Fumarate_red_D PF02313.12 gi|154151033|ref|YP_001404651.1| - 0.6 10.0 5.1 0.8 9.6 3.5 1.2 1 0 0 1 1 1 0 Fumarate reductase subunit D PrgI PF12666.2 gi|154151033|ref|YP_001404651.1| - 1 9.5 7.1 18 5.5 4.9 2.1 1 1 0 1 1 1 0 PrgI family protein DUF3494 PF11999.3 gi|154151034|ref|YP_001404652.1| - 0 1131.8 133.7 1.2e-70 237.3 15.2 5.1 5 0 0 5 5 5 5 Protein of unknown function (DUF3494) DUF2917 PF11142.3 gi|154151034|ref|YP_001404652.1| - 3.7e-07 29.2 0.1 4.2 6.6 0.0 5.4 5 0 0 5 5 5 3 Protein of unknown function (DUF2917) BiPBP_C PF06832.7 gi|154151034|ref|YP_001404652.1| - 0.00011 22.0 0.1 45 4.0 0.0 5.1 5 0 0 5 5 5 0 Penicillin-Binding Protein C-terminus Family DUF3718 PF12514.3 gi|154151034|ref|YP_001404652.1| - 1.4 9.0 6.1 1.2e+02 2.8 0.1 4.4 5 0 0 5 5 5 0 Protein of unknown function (DUF3718) RsbRD_N PF14361.1 gi|154151035|ref|YP_001404653.1| - 1.4e-29 102.5 2.0 1.8e-29 102.2 0.6 1.8 2 0 0 2 2 2 1 RsbT co-antagonist protein rsbRD N-terminal domain STAS PF01740.16 gi|154151035|ref|YP_001404653.1| - 1e-08 34.5 0.1 1.9e-08 33.6 0.0 1.5 1 0 0 1 1 1 1 STAS domain STAS PF01740.16 gi|154151036|ref|YP_001404654.1| - 2.3e-05 23.7 0.1 3.2e-05 23.3 0.1 1.3 1 1 0 1 1 1 1 STAS domain STAS_2 PF13466.1 gi|154151036|ref|YP_001404654.1| - 0.025 14.6 0.1 0.035 14.1 0.1 1.2 1 0 0 1 1 1 0 STAS domain HATPase_c PF02518.21 gi|154151037|ref|YP_001404655.1| - 1e-09 38.1 0.1 1.3e-09 37.7 0.0 1.1 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.1 gi|154151037|ref|YP_001404655.1| - 1.4e-07 31.3 0.0 1.7e-07 31.0 0.0 1.1 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain SbcCD_C PF13558.1 gi|154151037|ref|YP_001404655.1| - 0.082 12.8 0.0 0.81 9.6 0.0 2.1 2 0 0 2 2 2 0 Putative exonuclease SbcCD, C subunit SpoIIE PF07228.7 gi|154151038|ref|YP_001404656.1| - 3.3e-18 66.1 0.2 4.4e-17 62.4 0.1 2.4 2 1 0 2 2 2 1 Stage II sporulation protein E (SpoIIE) HATPase_c_2 PF13581.1 gi|154151038|ref|YP_001404656.1| - 5.5e-06 26.1 0.0 1.7e-05 24.6 0.0 1.8 2 0 0 2 2 2 1 Histidine kinase-like ATPase domain HATPase_c PF02518.21 gi|154151038|ref|YP_001404656.1| - 0.07 12.8 0.0 0.15 11.8 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_9 PF13426.1 gi|154151039|ref|YP_001404657.1| - 4.7e-69 229.3 12.4 4.3e-18 65.5 0.0 7.5 7 0 0 7 7 7 6 PAS domain PAS PF00989.19 gi|154151039|ref|YP_001404657.1| - 3.7e-51 171.6 1.6 2.3e-15 56.3 0.0 6.6 6 0 0 6 6 6 5 PAS fold PAS_3 PF08447.6 gi|154151039|ref|YP_001404657.1| - 7.5e-46 154.1 5.7 1.3e-18 66.8 0.1 6.4 6 0 0 6 6 6 3 PAS fold PAS_4 PF08448.5 gi|154151039|ref|YP_001404657.1| - 1.6e-42 143.9 0.2 8.7e-13 48.2 0.0 6.8 6 0 0 6 6 6 6 PAS fold PAS_8 PF13188.1 gi|154151039|ref|YP_001404657.1| - 1.4e-39 132.5 2.4 6.7e-09 35.2 0.0 5.8 5 0 0 5 5 5 4 PAS domain HisKA_2 PF07568.7 gi|154151039|ref|YP_001404657.1| - 7.3e-30 102.6 2.0 7.3e-30 102.6 1.4 3.6 3 0 0 3 3 3 1 Histidine kinase HATPase_c PF02518.21 gi|154151039|ref|YP_001404657.1| - 1.6e-19 69.6 1.5 1.3e-11 44.2 0.1 2.8 2 0 0 2 2 2 2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.1 gi|154151039|ref|YP_001404657.1| - 1.7e-15 56.9 0.0 1.5e-08 34.4 0.0 3.1 2 0 0 2 2 2 2 Histidine kinase-like ATPase domain HWE_HK PF07536.9 gi|154151039|ref|YP_001404657.1| - 1.4e-05 25.4 5.8 4.2e-05 23.9 0.0 3.4 3 0 0 3 3 2 1 HWE histidine kinase PAS_11 PF14598.1 gi|154151039|ref|YP_001404657.1| - 0.007 16.3 0.0 1.2 9.0 0.0 4.3 5 0 0 5 5 5 1 PAS domain Lipoprotein_3 PF00938.12 gi|154151039|ref|YP_001404657.1| - 0.0079 15.9 1.6 30 4.4 0.0 3.8 3 0 0 3 3 3 0 Lipoprotein HATPase_c_3 PF13589.1 gi|154151039|ref|YP_001404657.1| - 0.014 15.0 0.0 0.6 9.7 0.0 2.6 2 0 0 2 2 2 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.19 gi|154151040|ref|YP_001404658.1| - 2.8e-21 75.6 0.1 6.7e-21 74.3 0.0 1.7 2 0 0 2 2 2 1 Response regulator receiver domain PAS_4 PF08448.5 gi|154151040|ref|YP_001404658.1| - 1.1e-19 70.5 0.0 1.2e-12 47.8 0.0 2.3 2 0 0 2 2 2 2 PAS fold PAS PF00989.19 gi|154151040|ref|YP_001404658.1| - 1.4e-17 63.4 0.0 5.3e-08 32.6 0.0 2.4 2 0 0 2 2 2 2 PAS fold PAS_9 PF13426.1 gi|154151040|ref|YP_001404658.1| - 4e-17 62.5 0.1 1.5e-07 31.7 0.0 2.3 2 0 0 2 2 2 2 PAS domain PAS_8 PF13188.1 gi|154151040|ref|YP_001404658.1| - 1.8e-07 30.7 0.1 0.0083 15.9 0.0 2.7 2 0 0 2 2 2 2 PAS domain PAS_10 PF13596.1 gi|154151040|ref|YP_001404658.1| - 2.2e-06 27.9 0.1 8.6e-06 25.9 0.0 1.9 2 0 0 2 2 2 1 PAS domain T2SE PF00437.15 gi|154151043|ref|YP_001404661.1| - 3.2e-45 154.1 0.0 4.7e-45 153.5 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.1 gi|154151043|ref|YP_001404661.1| - 3.1e-05 23.4 0.0 7.5e-05 22.1 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_tran PF00005.22 gi|154151043|ref|YP_001404661.1| - 0.014 15.7 0.0 0.7 10.1 0.0 3.1 3 0 0 3 3 3 0 ABC transporter FtsK_SpoIIIE PF01580.13 gi|154151043|ref|YP_001404661.1| - 0.02 14.3 0.5 0.7 9.3 0.0 2.7 2 1 0 2 2 2 0 FtsK/SpoIIIE family E1-E2_ATPase PF00122.15 gi|154151044|ref|YP_001404662.1| - 1.9e-54 184.1 2.3 1.9e-54 184.1 1.6 2.8 2 1 0 2 2 2 1 E1-E2 ATPase Hydrolase PF00702.21 gi|154151044|ref|YP_001404662.1| - 1.1e-29 104.4 1.2 2e-29 103.5 0.9 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.2 gi|154151044|ref|YP_001404662.1| - 3.5e-16 59.9 0.1 8e-16 58.7 0.1 1.7 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.21 gi|154151044|ref|YP_001404662.1| - 2.4e-11 42.9 0.0 5.1e-11 41.8 0.0 1.6 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Hydrolase_3 PF08282.7 gi|154151044|ref|YP_001404662.1| - 7e-06 25.7 0.7 3.8e-05 23.3 0.6 2.0 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_like2 PF13246.1 gi|154151044|ref|YP_001404662.1| - 0.013 15.4 0.0 0.032 14.1 0.0 1.6 1 0 0 1 1 1 0 Putative hydrolase of sodium-potassium ATPase alpha subunit Response_reg PF00072.19 gi|154151045|ref|YP_001404663.1| - 1.5e-19 70.0 0.1 5.4e-19 68.2 0.0 2.0 2 0 0 2 2 2 1 Response regulator receiver domain PAS_9 PF13426.1 gi|154151045|ref|YP_001404663.1| - 6e-19 68.3 0.2 1.8e-08 34.7 0.0 2.7 2 0 0 2 2 2 2 PAS domain PAS_8 PF13188.1 gi|154151045|ref|YP_001404663.1| - 5.3e-16 57.8 0.1 2.1e-07 30.5 0.0 3.0 3 0 0 3 3 2 2 PAS domain GAF_2 PF13185.1 gi|154151045|ref|YP_001404663.1| - 2.1e-14 54.2 0.0 4.5e-14 53.1 0.0 1.6 1 0 0 1 1 1 1 GAF domain HATPase_c PF02518.21 gi|154151045|ref|YP_001404663.1| - 1.8e-13 50.1 0.3 7.3e-13 48.2 0.1 2.1 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS PF00989.19 gi|154151045|ref|YP_001404663.1| - 1.9e-11 43.7 0.0 0.00016 21.4 0.0 2.7 2 0 0 2 2 2 2 PAS fold PAS_4 PF08448.5 gi|154151045|ref|YP_001404663.1| - 1e-07 31.9 0.0 0.023 14.7 0.0 2.7 2 0 0 2 2 2 2 PAS fold GAF PF01590.21 gi|154151045|ref|YP_001404663.1| - 0.00014 21.9 0.0 0.00028 21.0 0.0 1.5 1 0 0 1 1 1 1 GAF domain NifZ PF04319.8 gi|154151045|ref|YP_001404663.1| - 0.00038 19.7 0.2 1.6 8.1 0.0 3.8 4 0 0 4 4 4 2 NifZ domain GAF_3 PF13492.1 gi|154151045|ref|YP_001404663.1| - 0.0019 18.3 0.0 0.0035 17.4 0.0 1.5 1 0 0 1 1 1 1 GAF domain HisKA PF00512.20 gi|154151045|ref|YP_001404663.1| - 0.024 14.6 0.1 0.066 13.2 0.0 1.8 1 0 0 1 1 1 0 His Kinase A (phospho-acceptor) domain HATPase_c_3 PF13589.1 gi|154151045|ref|YP_001404663.1| - 0.03 13.9 0.0 0.11 12.1 0.0 1.9 2 0 0 2 2 2 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NSP11 PF06471.7 gi|154151045|ref|YP_001404663.1| - 0.036 12.2 0.0 0.29 9.2 0.0 1.9 2 0 0 2 2 2 0 NSP11 MEKHLA PF08670.6 gi|154151045|ref|YP_001404663.1| - 0.04 13.4 0.0 0.87 9.1 0.0 2.3 2 0 0 2 2 2 0 MEKHLA domain Glyco_hydro_45 PF02015.11 gi|154151045|ref|YP_001404663.1| - 0.11 12.5 0.0 5.4 7.0 0.0 2.2 2 0 0 2 2 2 0 Glycosyl hydrolase family 45 Sod_Fe_C PF02777.13 gi|154151046|ref|YP_001404664.1| - 5.8e-39 132.1 0.1 1.1e-38 131.3 0.1 1.4 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.17 gi|154151046|ref|YP_001404664.1| - 1.4e-28 98.9 3.1 2.4e-28 98.2 2.2 1.4 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, alpha-hairpin domain Pyr_redox_2 PF07992.9 gi|154151047|ref|YP_001404665.1| - 3.5e-32 111.9 1.0 3.4e-31 108.7 0.7 3.1 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.17 gi|154151047|ref|YP_001404665.1| - 8.9e-26 90.0 0.0 1.5e-25 89.3 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.22 gi|154151047|ref|YP_001404665.1| - 2.1e-18 66.5 4.0 1.6e-14 54.0 0.1 2.7 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|154151047|ref|YP_001404665.1| - 1.8e-12 47.7 0.0 2.8e-08 34.0 0.0 2.4 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.17 gi|154151047|ref|YP_001404665.1| - 7.6e-08 31.6 4.1 0.00017 20.5 1.1 3.7 3 1 0 3 3 3 2 Glucose inhibited division protein A FAD_oxidored PF12831.2 gi|154151047|ref|YP_001404665.1| - 8.1e-07 28.4 2.3 5.7e-05 22.3 1.9 2.3 2 0 0 2 2 2 1 FAD dependent oxidoreductase HI0933_like PF03486.9 gi|154151047|ref|YP_001404665.1| - 9.2e-06 24.3 1.1 0.013 13.9 0.4 3.5 3 1 1 4 4 4 2 HI0933-like protein FAD_binding_2 PF00890.19 gi|154151047|ref|YP_001404665.1| - 3.2e-05 22.9 8.4 0.0002 20.3 2.9 2.7 2 1 0 2 2 2 1 FAD binding domain NAD_binding_8 PF13450.1 gi|154151047|ref|YP_001404665.1| - 4.9e-05 23.2 1.9 0.021 14.8 0.5 2.7 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain K_oxygenase PF13434.1 gi|154151047|ref|YP_001404665.1| - 0.0013 17.7 0.0 1.7 7.4 0.0 3.0 3 0 0 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) AlaDh_PNT_C PF01262.16 gi|154151047|ref|YP_001404665.1| - 0.0015 18.0 1.1 0.23 11.0 1.5 2.3 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain DAO PF01266.19 gi|154151047|ref|YP_001404665.1| - 0.0043 15.9 15.4 0.035 12.9 3.8 3.3 3 2 1 4 4 4 2 FAD dependent oxidoreductase Lycopene_cycl PF05834.7 gi|154151047|ref|YP_001404665.1| - 0.089 11.6 0.9 0.6 8.9 0.5 2.1 2 0 0 2 2 2 0 Lycopene cyclase protein NAD_binding_9 PF13454.1 gi|154151047|ref|YP_001404665.1| - 0.11 12.2 1.5 4.2 7.1 0.1 2.4 2 0 0 2 2 2 0 FAD-NAD(P)-binding adh_short PF00106.20 gi|154151047|ref|YP_001404665.1| - 0.24 11.3 6.5 0.18 11.6 0.2 2.6 2 0 0 2 2 2 0 short chain dehydrogenase Lipoprotein_15 PF03640.10 gi|154151048|ref|YP_001404666.1| - 7.6e-50 166.1 4.0 4.4e-12 45.2 0.0 4.1 4 0 0 4 4 4 4 Secreted repeat of unknown function DUF3185 PF11381.3 gi|154151048|ref|YP_001404666.1| - 0.053 13.2 0.2 0.13 11.9 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3185) SusE PF14292.1 gi|154151048|ref|YP_001404666.1| - 0.11 12.2 0.1 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 SusE outer membrane protein PP2C PF00481.16 gi|154151053|ref|YP_001404671.1| - 0.0059 16.0 0.0 0.0087 15.4 0.0 1.2 1 0 0 1 1 1 1 Protein phosphatase 2C ATP-cone PF03477.11 gi|154151054|ref|YP_001404672.1| - 5.3e-09 36.3 0.2 7.1e-09 35.9 0.1 1.2 1 0 0 1 1 1 1 ATP cone domain DUF2875 PF11394.3 gi|154151055|ref|YP_001404673.1| - 0.0049 15.4 0.0 0.0054 15.3 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2875) GFO_IDH_MocA PF01408.17 gi|154151056|ref|YP_001404674.1| - 2.7e-11 44.0 0.0 4.5e-11 43.2 0.0 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold GFO_IDH_MocA_C PF02894.12 gi|154151056|ref|YP_001404674.1| - 4.1e-07 29.8 0.0 9.3e-07 28.6 0.0 1.6 1 0 0 1 1 1 1 Oxidoreductase family, C-terminal alpha/beta domain PBP PF01161.15 gi|154151057|ref|YP_001404675.1| - 5.4e-24 84.6 0.0 6.8e-24 84.3 0.0 1.0 1 0 0 1 1 1 1 Phosphatidylethanolamine-binding protein DUF2769 PF10967.3 gi|154151058|ref|YP_001404676.1| - 7.2e-17 61.4 10.6 8.6e-17 61.1 7.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2769) Zn_Tnp_IS1595 PF12760.2 gi|154151058|ref|YP_001404676.1| - 0.028 14.2 2.8 0.028 14.2 1.9 1.8 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zf-Paramyx-P PF13008.2 gi|154151058|ref|YP_001404676.1| - 0.062 12.4 8.0 0.65 9.2 0.8 2.3 2 0 0 2 2 2 0 Zinc-binding domain of Paramyxoviridae V protein Prim_Zn_Ribbon PF08273.7 gi|154151058|ref|YP_001404676.1| - 0.071 13.1 1.4 0.071 13.1 1.0 2.6 2 1 0 2 2 2 0 Zinc-binding domain of primase-helicase Cys_rich_KTR PF14205.1 gi|154151058|ref|YP_001404676.1| - 8.1 5.9 7.3 0.23 10.9 0.6 1.9 2 0 0 2 2 2 0 Cysteine-rich KTR PAS_4 PF08448.5 gi|154151059|ref|YP_001404677.1| - 6.4e-48 161.3 0.0 1.5e-19 70.0 0.0 5.8 5 1 0 5 5 5 5 PAS fold PAS_9 PF13426.1 gi|154151059|ref|YP_001404677.1| - 1.5e-38 131.3 0.0 4.4e-09 36.6 0.0 6.8 6 0 0 6 6 6 5 PAS domain PAS_8 PF13188.1 gi|154151059|ref|YP_001404677.1| - 1.3e-36 123.1 0.0 2.1e-08 33.7 0.0 5.8 5 0 0 5 5 5 5 PAS domain PAS PF00989.19 gi|154151059|ref|YP_001404677.1| - 1.7e-34 117.9 0.0 7.9e-11 41.7 0.0 6.1 5 1 0 5 5 5 5 PAS fold HisKA_2 PF07568.7 gi|154151059|ref|YP_001404677.1| - 8.1e-22 76.8 1.3 1.4e-20 72.8 0.2 2.7 2 0 0 2 2 2 1 Histidine kinase PAS_3 PF08447.6 gi|154151059|ref|YP_001404677.1| - 4e-20 71.7 0.0 1.1e-11 44.6 0.0 4.8 5 1 0 5 5 5 3 PAS fold PAS_7 PF12860.2 gi|154151059|ref|YP_001404677.1| - 2.2e-14 53.4 0.0 0.0026 17.7 0.0 5.5 5 0 0 5 5 5 3 PAS fold HATPase_c PF02518.21 gi|154151059|ref|YP_001404677.1| - 4.1e-08 32.9 0.0 2.3e-07 30.5 0.0 2.2 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HWE_HK PF07536.9 gi|154151059|ref|YP_001404677.1| - 4.5e-05 23.7 0.3 4.5e-05 23.7 0.2 2.0 2 0 0 2 2 1 1 HWE histidine kinase DUF3552 PF12072.3 gi|154151059|ref|YP_001404677.1| - 0.0019 17.4 16.9 0.033 13.3 5.5 2.4 2 0 0 2 2 2 2 Domain of unknown function (DUF3552) PAS_10 PF13596.1 gi|154151059|ref|YP_001404677.1| - 0.014 15.6 0.0 18 5.6 0.0 3.6 3 0 0 3 3 3 0 PAS domain DUF972 PF06156.8 gi|154151059|ref|YP_001404677.1| - 0.12 12.7 9.6 0.43 10.9 0.3 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF972) APG6 PF04111.7 gi|154151059|ref|YP_001404677.1| - 0.63 9.0 10.8 4.4 6.2 0.2 2.3 2 0 0 2 2 2 0 Autophagy protein Apg6 Syntaxin-6_N PF09177.6 gi|154151059|ref|YP_001404677.1| - 3 8.3 7.1 23 5.4 0.7 3.3 2 0 0 2 2 2 0 Syntaxin 6, N-terminal DUF3584 PF12128.3 gi|154151059|ref|YP_001404677.1| - 9.3 3.4 13.6 3 5.0 3.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3584) Response_reg PF00072.19 gi|154151060|ref|YP_001404678.1| - 5.7e-23 81.0 0.0 6.4e-23 80.8 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain Glycos_transf_1 PF00534.15 gi|154151060|ref|YP_001404678.1| - 0.13 11.7 0.0 0.18 11.2 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferases group 1 Cytochrom_B561 PF03188.11 gi|154151061|ref|YP_001404679.1| - 2e-11 43.8 14.6 4e-11 42.8 10.1 1.5 1 1 0 1 1 1 1 Eukaryotic cytochrome b561 Cytochrom_B_N PF00033.14 gi|154151061|ref|YP_001404679.1| - 2.1e-05 23.9 12.2 5.9e-05 22.5 2.3 2.2 1 1 1 2 2 2 2 Cytochrome b(N-terminal)/b6/petB Ni_hydr_CYTB PF01292.15 gi|154151061|ref|YP_001404679.1| - 0.00058 19.3 10.6 0.0035 16.7 7.3 1.9 1 1 0 1 1 1 1 Prokaryotic cytochrome b561 DUF4405 PF14358.1 gi|154151061|ref|YP_001404679.1| - 0.00063 19.8 11.3 0.44 10.7 0.3 3.5 1 1 2 3 3 3 3 Domain of unknown function (DUF4405) COX15-CtaA PF02628.10 gi|154151061|ref|YP_001404679.1| - 0.002 17.0 13.3 0.003 16.4 9.2 1.2 1 0 0 1 1 1 1 Cytochrome oxidase assembly protein DUF2306 PF10067.4 gi|154151061|ref|YP_001404679.1| - 0.016 15.3 1.7 0.016 15.3 1.2 3.0 1 1 2 3 3 3 0 Predicted membrane protein (DUF2306) DUF4079 PF13301.1 gi|154151061|ref|YP_001404679.1| - 0.021 14.8 9.6 0.034 14.1 6.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF4079) DUF2427 PF10348.4 gi|154151061|ref|YP_001404679.1| - 0.042 13.4 8.3 1.8 8.1 1.2 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF2427) PepSY_TM_2 PF13703.1 gi|154151061|ref|YP_001404679.1| - 0.14 12.3 14.8 1.6 8.9 1.1 2.9 1 1 1 2 2 2 0 PepSY-associated TM helix DUF4231 PF14015.1 gi|154151061|ref|YP_001404679.1| - 0.21 11.6 9.8 3.3 7.7 3.0 3.2 1 1 1 2 2 2 0 Protein of unknown function (DUF4231) VIT1 PF01988.14 gi|154151061|ref|YP_001404679.1| - 0.24 10.8 9.6 0.78 9.1 1.1 2.4 2 1 0 2 2 2 0 VIT family DUF4149 PF13664.1 gi|154151061|ref|YP_001404679.1| - 0.29 11.2 7.5 0.6 10.2 2.0 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4149) DUF420 PF04238.7 gi|154151061|ref|YP_001404679.1| - 0.43 10.5 11.1 4.4 7.2 7.7 2.2 1 1 0 1 1 1 0 Protein of unknown function (DUF420) SdpI PF13630.1 gi|154151061|ref|YP_001404679.1| - 0.48 10.1 21.9 0.18 11.5 1.9 3.5 2 1 2 4 4 4 0 SdpI/YhfL protein family DUF4131 PF13567.1 gi|154151061|ref|YP_001404679.1| - 0.51 9.7 14.0 0.43 9.9 1.7 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) Abhydrolase_9_N PF15420.1 gi|154151061|ref|YP_001404679.1| - 0.89 9.2 6.3 1.8 8.2 4.4 1.5 1 1 0 1 1 1 0 Alpha/beta-hydrolase family N-terminus DUF3366 PF11846.3 gi|154151061|ref|YP_001404679.1| - 1 9.1 8.1 1 9.2 0.1 2.4 1 1 0 2 2 2 0 Domain of unknown function (DUF3366) DUF872 PF05915.7 gi|154151061|ref|YP_001404679.1| - 1.1 9.1 3.2 0.81 9.5 0.7 1.9 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) Pox_A14 PF05767.7 gi|154151061|ref|YP_001404679.1| - 7.1 6.6 10.3 1.3 9.0 0.5 2.6 1 1 1 2 2 2 0 Poxvirus virion envelope protein A14 PAS_9 PF13426.1 gi|154151063|ref|YP_001404681.1| - 1.3e-59 198.9 0.1 1.2e-11 44.9 0.0 6.8 6 0 0 6 6 6 5 PAS domain PAS_4 PF08448.5 gi|154151063|ref|YP_001404681.1| - 2e-50 169.3 0.0 3.5e-11 43.1 0.0 6.6 6 0 0 6 6 6 6 PAS fold PAS_3 PF08447.6 gi|154151063|ref|YP_001404681.1| - 1.1e-40 137.5 0.0 6.5e-20 71.0 0.0 5.6 6 0 0 6 6 5 4 PAS fold PAS PF00989.19 gi|154151063|ref|YP_001404681.1| - 1.7e-40 137.3 0.0 5.3e-07 29.4 0.0 6.3 6 0 0 6 6 6 5 PAS fold PAS_8 PF13188.1 gi|154151063|ref|YP_001404681.1| - 6.7e-22 76.5 0.1 0.00042 20.0 0.0 6.1 6 0 0 6 6 6 5 PAS domain GAF_2 PF13185.1 gi|154151063|ref|YP_001404681.1| - 4.3e-20 72.6 0.1 2.3e-19 70.3 0.0 2.2 2 0 0 2 2 2 1 GAF domain HATPase_c PF02518.21 gi|154151063|ref|YP_001404681.1| - 5.5e-15 55.0 0.1 1.2e-14 53.9 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.19 gi|154151063|ref|YP_001404681.1| - 6.4e-14 51.9 0.0 1.6e-13 50.6 0.0 1.7 1 0 0 1 1 1 1 Response regulator receiver domain GAF_3 PF13492.1 gi|154151063|ref|YP_001404681.1| - 5.8e-11 42.6 0.0 1.7e-09 37.8 0.0 3.0 3 0 0 3 3 3 1 GAF domain GAF PF01590.21 gi|154151063|ref|YP_001404681.1| - 1.4e-10 41.4 0.0 2.9e-10 40.4 0.0 1.6 1 0 0 1 1 1 1 GAF domain HATPase_c_5 PF14501.1 gi|154151063|ref|YP_001404681.1| - 0.0019 17.8 0.0 0.0053 16.4 0.0 1.7 1 0 0 1 1 1 1 GHKL domain Glyco_hydro_14 PF01373.12 gi|154151063|ref|YP_001404681.1| - 0.15 10.7 0.0 6.4 5.3 0.0 2.3 2 0 0 2 2 2 0 Glycosyl hydrolase family 14 Spc7 PF08317.6 gi|154151063|ref|YP_001404681.1| - 0.2 10.2 7.5 0.85 8.2 0.5 2.7 2 0 0 2 2 2 0 Spc7 kinetochore protein DUF4407 PF14362.1 gi|154151063|ref|YP_001404681.1| - 0.84 8.5 6.5 3.6 6.4 0.6 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) DUF3552 PF12072.3 gi|154151063|ref|YP_001404681.1| - 2.3 7.3 20.2 0.31 10.2 4.2 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF3552) YCII PF03795.9 gi|154151064|ref|YP_001404682.1| - 8.8e-08 32.2 0.0 9.6e-08 32.1 0.0 1.2 1 0 0 1 1 1 1 YCII-related domain Spt5-NGN PF03439.8 gi|154151064|ref|YP_001404682.1| - 0.062 13.0 0.1 0.091 12.5 0.0 1.3 1 0 0 1 1 1 0 Early transcription elongation factor of RNA pol II, NGN section GDE_C PF06202.9 gi|154151065|ref|YP_001404683.1| - 7.7e-80 268.3 0.0 1.1e-79 267.8 0.0 1.2 1 0 0 1 1 1 1 Amylo-alpha-1,6-glucosidase GDE_N PF12439.3 gi|154151065|ref|YP_001404683.1| - 2.5e-24 85.7 0.0 7.2e-24 84.2 0.0 1.6 1 1 0 1 1 1 1 Glycogen debranching enzyme N terminal Glyco_hydro_100 PF12899.2 gi|154151065|ref|YP_001404683.1| - 0.0023 16.3 0.0 0.85 7.9 0.0 2.2 2 0 0 2 2 2 2 Alkaline and neutral invertase Glyco_hydro_63 PF03200.11 gi|154151065|ref|YP_001404683.1| - 0.012 13.5 0.0 0.016 13.0 0.0 1.1 1 0 0 1 1 1 0 Mannosyl oligosaccharide glucosidase Glycos_transf_1 PF00534.15 gi|154151066|ref|YP_001404684.1| - 3.1e-36 124.3 0.0 4.4e-36 123.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.1 gi|154151066|ref|YP_001404684.1| - 1.7e-23 83.4 0.0 4.9e-23 82.0 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_transf_4 PF13439.1 gi|154151066|ref|YP_001404684.1| - 8.1e-21 74.5 0.1 3.7e-18 65.8 0.0 3.0 2 1 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_1_4 PF13692.1 gi|154151066|ref|YP_001404684.1| - 2.7e-15 56.7 0.0 4.3e-15 56.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_5 PF08323.6 gi|154151066|ref|YP_001404684.1| - 4.2e-10 39.5 0.0 5.3e-09 35.9 0.0 2.5 1 1 0 1 1 1 1 Starch synthase catalytic domain Glyco_trans_1_2 PF13524.1 gi|154151066|ref|YP_001404684.1| - 8e-08 32.4 0.0 2e-07 31.1 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_1 PF00534.15 gi|154151067|ref|YP_001404685.1| - 2.6e-35 121.3 0.0 3.7e-35 120.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|154151067|ref|YP_001404685.1| - 4.7e-18 65.6 0.1 3.3e-17 62.8 0.0 2.0 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_5 PF08323.6 gi|154151067|ref|YP_001404685.1| - 1.8e-16 60.3 0.4 2.5e-10 40.2 0.1 2.2 1 1 1 2 2 2 2 Starch synthase catalytic domain Glyco_trans_4_4 PF13579.1 gi|154151067|ref|YP_001404685.1| - 1e-13 51.7 0.0 5e-13 49.4 0.0 1.9 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_transf_4 PF13439.1 gi|154151067|ref|YP_001404685.1| - 1.3e-10 41.2 0.3 5.6e-10 39.2 0.2 1.9 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.1 gi|154151067|ref|YP_001404685.1| - 0.0018 18.5 0.0 0.0041 17.3 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Bse634I PF07832.6 gi|154151067|ref|YP_001404685.1| - 0.11 11.5 0.0 0.17 10.9 0.0 1.2 1 0 0 1 1 1 0 Cfr10I/Bse634I restriction endonuclease Glycogen_syn PF05693.8 gi|154151067|ref|YP_001404685.1| - 0.15 10.2 0.0 1.2 7.3 0.0 1.9 2 0 0 2 2 2 0 Glycogen synthase ADP_PFK_GK PF04587.10 gi|154151068|ref|YP_001404686.1| - 1.9e-44 151.6 0.0 1.4e-43 148.8 0.0 2.1 1 1 0 1 1 1 1 ADP-specific Phosphofructokinase/Glucokinase conserved region DUF3417 PF11897.3 gi|154151069|ref|YP_001404687.1| - 2.2e-41 140.5 3.0 9.7e-41 138.4 0.1 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF3417) Phosphorylase PF00343.15 gi|154151069|ref|YP_001404687.1| - 3.7e-18 64.8 0.0 7e-11 40.7 0.0 3.4 4 0 0 4 4 4 3 Carbohydrate phosphorylase PAS_4 PF08448.5 gi|154151070|ref|YP_001404688.1| - 3e-34 117.3 0.1 1e-12 48.0 0.0 5.1 4 1 0 4 4 4 4 PAS fold PAS_9 PF13426.1 gi|154151070|ref|YP_001404688.1| - 1.3e-31 109.0 0.0 1.6e-13 50.9 0.0 5.1 4 0 0 4 4 4 3 PAS domain PAS PF00989.19 gi|154151070|ref|YP_001404688.1| - 1.3e-22 79.7 0.9 4e-12 45.9 0.0 4.9 5 0 0 5 5 5 3 PAS fold HisKA_2 PF07568.7 gi|154151070|ref|YP_001404688.1| - 8.5e-21 73.6 0.1 3.6e-20 71.5 0.1 2.2 1 0 0 1 1 1 1 Histidine kinase HATPase_c PF02518.21 gi|154151070|ref|YP_001404688.1| - 2.3e-14 53.0 0.0 5.5e-14 51.8 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.1 gi|154151070|ref|YP_001404688.1| - 4.1e-13 48.6 0.1 3.8e-05 23.3 0.0 3.8 3 0 0 3 3 3 2 PAS domain PAS_3 PF08447.6 gi|154151070|ref|YP_001404688.1| - 2.1e-12 46.9 0.0 3.5e-05 23.7 0.0 3.6 3 0 0 3 3 3 2 PAS fold GAF PF01590.21 gi|154151070|ref|YP_001404688.1| - 4e-12 46.5 0.1 9.3e-12 45.3 0.1 1.6 1 0 0 1 1 1 1 GAF domain HATPase_c_2 PF13581.1 gi|154151070|ref|YP_001404688.1| - 2.3e-10 40.3 0.0 5.2e-10 39.1 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain GAF_2 PF13185.1 gi|154151070|ref|YP_001404688.1| - 3.7e-10 40.4 0.2 4.6e-09 36.9 0.0 2.8 4 0 0 4 4 2 1 GAF domain GAF_3 PF13492.1 gi|154151070|ref|YP_001404688.1| - 5.5e-10 39.4 0.0 1.8e-09 37.8 0.0 2.0 1 0 0 1 1 1 1 GAF domain PAS_7 PF12860.2 gi|154151070|ref|YP_001404688.1| - 6.8e-09 35.7 0.8 3.3e-06 27.1 0.0 4.4 4 1 0 4 4 4 1 PAS fold PAS_10 PF13596.1 gi|154151070|ref|YP_001404688.1| - 4.6e-06 26.8 0.0 0.35 11.1 0.0 3.9 4 0 0 4 4 4 2 PAS domain HWE_HK PF07536.9 gi|154151070|ref|YP_001404688.1| - 3.6e-05 24.1 1.9 7.6e-05 23.0 0.1 2.5 3 0 0 3 3 2 1 HWE histidine kinase Response_reg PF00072.19 gi|154151071|ref|YP_001404689.1| - 1.5e-21 76.4 1.9 2.9e-21 75.5 0.2 2.2 3 0 0 3 3 3 1 Response regulator receiver domain PadR PF03551.9 gi|154151071|ref|YP_001404689.1| - 1.7e-06 27.6 0.8 3.3e-06 26.7 0.6 1.5 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family TrmB PF01978.14 gi|154151071|ref|YP_001404689.1| - 0.013 15.1 1.0 0.26 11.0 0.3 2.4 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB Penicillinase_R PF03965.11 gi|154151071|ref|YP_001404689.1| - 0.059 13.4 0.1 0.14 12.3 0.1 1.6 1 1 0 1 1 1 0 Penicillinase repressor TBPIP PF07106.8 gi|154151071|ref|YP_001404689.1| - 0.11 11.9 0.4 0.19 11.2 0.3 1.3 1 0 0 1 1 1 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) GvpH PF05455.6 gi|154151072|ref|YP_001404690.1| - 0.0025 17.4 0.0 0.003 17.2 0.0 1.0 1 0 0 1 1 1 1 GvpH PMSR PF01625.16 gi|154151073|ref|YP_001404691.1| - 3e-62 209.1 1.1 3.9e-62 208.7 0.7 1.1 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase Glutaredoxin PF00462.19 gi|154151073|ref|YP_001404691.1| - 5.1e-12 45.5 0.0 1e-11 44.6 0.0 1.5 1 0 0 1 1 1 1 Glutaredoxin SH3BGR PF04908.10 gi|154151073|ref|YP_001404691.1| - 0.00037 20.3 0.6 0.013 15.4 0.0 2.6 3 0 0 3 3 3 1 SH3-binding, glutamic acid-rich protein ArsC PF03960.10 gi|154151073|ref|YP_001404691.1| - 0.00076 19.5 0.0 0.0015 18.5 0.0 1.5 1 0 0 1 1 1 1 ArsC family DUF836 PF05768.9 gi|154151073|ref|YP_001404691.1| - 0.012 15.8 0.0 0.022 15.0 0.0 1.5 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) GST_N_3 PF13417.1 gi|154151073|ref|YP_001404691.1| - 0.057 13.6 0.0 0.16 12.2 0.0 1.7 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain DJ-1_PfpI PF01965.19 gi|154151074|ref|YP_001404692.1| - 1.9e-38 131.2 0.1 2.2e-38 130.9 0.0 1.1 1 0 0 1 1 1 1 DJ-1/PfpI family DUF4066 PF13278.1 gi|154151074|ref|YP_001404692.1| - 1.7e-11 43.6 0.0 2.1e-11 43.3 0.0 1.0 1 0 0 1 1 1 1 Putative amidotransferase GATase PF00117.23 gi|154151074|ref|YP_001404692.1| - 0.00027 20.4 0.0 0.00029 20.3 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.9 gi|154151074|ref|YP_001404692.1| - 0.0082 15.7 0.0 0.012 15.2 0.0 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase_5 PF13507.1 gi|154151074|ref|YP_001404692.1| - 0.02 13.8 0.0 0.048 12.5 0.0 1.6 1 1 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain RIIa PF02197.12 gi|154151074|ref|YP_001404692.1| - 0.031 13.7 1.3 1.1 8.7 0.4 2.6 2 0 0 2 2 2 0 Regulatory subunit of type II PKA R-subunit Peptidase_C26 PF07722.8 gi|154151074|ref|YP_001404692.1| - 0.045 13.1 0.0 0.22 10.9 0.0 1.9 1 1 0 1 1 1 0 Peptidase C26 HEAT_2 PF13646.1 gi|154151075|ref|YP_001404693.1| - 0.0001 22.5 1.6 0.00018 21.7 1.0 1.5 1 1 0 1 1 1 1 HEAT repeats Arm PF00514.18 gi|154151075|ref|YP_001404693.1| - 0.048 13.5 0.1 1 9.2 0.0 2.6 1 1 0 2 2 2 0 Armadillo/beta-catenin-like repeat HTH_24 PF13412.1 gi|154151077|ref|YP_001404695.1| - 3.8e-09 35.7 0.1 4.7e-09 35.4 0.1 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.17 gi|154151077|ref|YP_001404695.1| - 5.7e-07 29.1 0.1 6.7e-07 28.9 0.1 1.1 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.2 gi|154151077|ref|YP_001404695.1| - 7.8e-07 28.6 0.0 9.3e-07 28.4 0.0 1.1 1 0 0 1 1 1 1 MarR family TFIIE_alpha PF02002.12 gi|154151077|ref|YP_001404695.1| - 5.2e-06 25.8 0.0 6.6e-06 25.5 0.0 1.1 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_DeoR PF08220.7 gi|154151077|ref|YP_001404695.1| - 5.5e-06 25.8 0.1 7.6e-06 25.3 0.0 1.1 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain GntR PF00392.16 gi|154151077|ref|YP_001404695.1| - 6.9e-06 25.4 0.0 9.2e-06 25.0 0.0 1.2 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_11 PF08279.7 gi|154151077|ref|YP_001404695.1| - 2e-05 24.1 0.1 2.9e-05 23.6 0.1 1.3 1 0 0 1 1 1 1 HTH domain HTH_20 PF12840.2 gi|154151077|ref|YP_001404695.1| - 0.00012 21.7 0.0 0.00017 21.2 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4_2 PF08281.7 gi|154151077|ref|YP_001404695.1| - 0.00014 21.2 0.8 0.00042 19.7 0.6 1.8 1 1 0 1 1 1 1 Sigma-70, region 4 GerE PF00196.14 gi|154151077|ref|YP_001404695.1| - 0.00031 20.0 0.8 0.00096 18.4 0.6 1.8 1 1 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_27 PF13463.1 gi|154151077|ref|YP_001404695.1| - 0.00031 21.0 0.1 0.00034 20.8 0.0 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_Mga PF08280.6 gi|154151077|ref|YP_001404695.1| - 0.00038 20.1 0.1 0.00054 19.6 0.0 1.2 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain HTH_12 PF08461.5 gi|154151077|ref|YP_001404695.1| - 0.00045 19.8 0.6 0.00071 19.2 0.4 1.4 1 1 0 1 1 1 1 Ribonuclease R winged-helix domain Sigma70_r4 PF04545.11 gi|154151077|ref|YP_001404695.1| - 0.00073 18.7 0.2 0.003 16.8 0.1 2.1 2 1 0 2 2 2 1 Sigma-70, region 4 DUF3489 PF11994.3 gi|154151077|ref|YP_001404695.1| - 0.00095 19.0 0.1 0.0011 18.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3489) Penicillinase_R PF03965.11 gi|154151077|ref|YP_001404695.1| - 0.0014 18.7 0.1 0.0014 18.6 0.0 1.1 1 0 0 1 1 1 1 Penicillinase repressor HTH_38 PF13936.1 gi|154151077|ref|YP_001404695.1| - 0.0015 18.0 0.2 0.0028 17.1 0.0 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain RepL PF05732.6 gi|154151077|ref|YP_001404695.1| - 0.0018 17.5 0.1 0.0025 17.0 0.1 1.2 1 0 0 1 1 1 1 Firmicute plasmid replication protein (RepL) HTH_AsnC-type PF13404.1 gi|154151077|ref|YP_001404695.1| - 0.0019 17.7 0.0 0.0026 17.2 0.0 1.2 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain Crp PF00325.15 gi|154151077|ref|YP_001404695.1| - 0.0019 17.5 0.0 0.0032 16.9 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, crp family TrmB PF01978.14 gi|154151077|ref|YP_001404695.1| - 0.002 17.8 0.1 0.0022 17.6 0.1 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Fe_dep_repress PF01325.14 gi|154151077|ref|YP_001404695.1| - 0.002 18.0 0.1 0.0029 17.4 0.1 1.2 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_36 PF13730.1 gi|154151077|ref|YP_001404695.1| - 0.0023 18.0 0.1 0.0029 17.6 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Tnp_IS630 PF01710.11 gi|154151077|ref|YP_001404695.1| - 0.0024 17.5 0.3 0.003 17.2 0.2 1.2 1 0 0 1 1 1 1 Transposase HTH_Crp_2 PF13545.1 gi|154151077|ref|YP_001404695.1| - 0.0042 16.8 0.0 0.0065 16.2 0.0 1.3 1 1 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_23 PF13384.1 gi|154151077|ref|YP_001404695.1| - 0.0046 16.5 0.0 0.0082 15.7 0.0 1.5 1 1 0 1 1 1 1 Homeodomain-like domain HTH_28 PF13518.1 gi|154151077|ref|YP_001404695.1| - 0.007 16.3 0.0 0.0092 15.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain FaeA PF04703.7 gi|154151077|ref|YP_001404695.1| - 0.0097 16.0 0.1 0.012 15.7 0.1 1.1 1 0 0 1 1 1 1 FaeA-like protein SgrR_N PF12793.2 gi|154151077|ref|YP_001404695.1| - 0.014 15.4 0.0 0.017 15.0 0.0 1.3 1 0 0 1 1 1 0 Sugar transport-related sRNA regulator N-term DNA_binding_1 PF01035.15 gi|154151077|ref|YP_001404695.1| - 0.014 15.1 0.0 0.019 14.6 0.0 1.2 1 0 0 1 1 1 0 6-O-methylguanine DNA methyltransferase, DNA binding domain HTH_29 PF13551.1 gi|154151077|ref|YP_001404695.1| - 0.015 15.4 0.0 0.016 15.3 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn helix Rrf2 PF02082.15 gi|154151077|ref|YP_001404695.1| - 0.015 15.4 0.1 0.019 15.0 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator HTH_5 PF01022.15 gi|154151077|ref|YP_001404695.1| - 0.02 14.5 0.0 0.027 14.1 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family LexA_DNA_bind PF01726.11 gi|154151077|ref|YP_001404695.1| - 0.023 14.2 0.5 0.06 12.9 0.3 1.7 1 1 0 1 1 1 0 LexA DNA binding domain HTH_IclR PF09339.5 gi|154151077|ref|YP_001404695.1| - 0.026 14.0 0.0 0.036 13.6 0.0 1.2 1 0 0 1 1 1 0 IclR helix-turn-helix domain B-block_TFIIIC PF04182.7 gi|154151077|ref|YP_001404695.1| - 0.068 13.0 0.1 0.09 12.6 0.1 1.3 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC HrcA_DNA-bdg PF03444.10 gi|154151077|ref|YP_001404695.1| - 0.095 12.1 0.0 0.16 11.4 0.0 1.5 1 1 0 1 1 1 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding EAP30 PF04157.11 gi|154151077|ref|YP_001404695.1| - 0.11 11.6 0.0 0.13 11.3 0.0 1.1 1 0 0 1 1 1 0 EAP30/Vps36 family HTH_30 PF13556.1 gi|154151077|ref|YP_001404695.1| - 0.14 11.7 0.1 0.2 11.2 0.0 1.3 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain Glyco_hydro_57 PF03065.10 gi|154151079|ref|YP_001404697.1| - 3.9e-65 220.1 0.0 1.8e-64 217.9 0.0 2.0 1 1 0 1 1 1 1 Glycosyl hydrolase family 57 SPRY PF00622.23 gi|154151079|ref|YP_001404697.1| - 0.047 13.7 0.0 2 8.4 0.0 2.3 2 0 0 2 2 2 0 SPRY domain Glycos_transf_1 PF00534.15 gi|154151080|ref|YP_001404698.1| - 1.5e-33 115.6 0.0 2.8e-33 114.7 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|154151080|ref|YP_001404698.1| - 1.2e-16 61.0 0.1 3.2e-16 59.7 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_5 PF08323.6 gi|154151080|ref|YP_001404698.1| - 9.6e-14 51.4 0.1 4.8e-08 32.8 0.1 2.2 1 1 1 2 2 2 2 Starch synthase catalytic domain Glyco_trans_4_4 PF13579.1 gi|154151080|ref|YP_001404698.1| - 1.3e-13 51.3 0.0 6.1e-13 49.2 0.0 2.1 2 1 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_transf_4 PF13439.1 gi|154151080|ref|YP_001404698.1| - 2.4e-13 50.1 0.0 5.8e-13 48.9 0.0 1.7 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.1 gi|154151080|ref|YP_001404698.1| - 0.0001 22.5 0.0 0.00024 21.3 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.1 gi|154151080|ref|YP_001404698.1| - 0.0075 16.1 0.0 0.013 15.2 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like Glycogen_syn PF05693.8 gi|154151080|ref|YP_001404698.1| - 0.066 11.4 0.0 4.5 5.4 0.0 2.8 3 0 0 3 3 3 0 Glycogen synthase Oxidored_FMN PF00724.15 gi|154151081|ref|YP_001404699.1| - 1.2e-87 294.0 0.0 1.4e-87 293.8 0.0 1.0 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family ICL PF00463.16 gi|154151081|ref|YP_001404699.1| - 0.014 13.6 0.0 0.02 13.0 0.0 1.1 1 0 0 1 1 1 0 Isocitrate lyase family PGK PF00162.14 gi|154151082|ref|YP_001404700.1| - 1.3e-147 491.3 0.0 1.5e-147 491.2 0.0 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase PsiE PF06146.7 gi|154151083|ref|YP_001404701.1| - 1.1e-11 44.8 5.1 1.1e-11 44.8 3.5 2.2 2 0 0 2 2 2 1 Phosphate-starvation-inducible E Caps_synth_CapC PF14102.1 gi|154151083|ref|YP_001404701.1| - 0.34 11.0 8.8 0.028 14.5 2.3 1.8 1 1 0 2 2 2 0 Capsule biosynthesis CapC Fig1 PF12351.3 gi|154151083|ref|YP_001404701.1| - 0.55 10.0 4.7 0.25 11.1 1.6 1.5 1 1 1 2 2 2 0 Ca2+ regulator and membrane fusion protein Fig1 Pox_A14 PF05767.7 gi|154151083|ref|YP_001404701.1| - 4.6 7.2 8.6 1.8 8.5 2.8 2.4 1 1 0 2 2 2 0 Poxvirus virion envelope protein A14 RseC_MucC PF04246.7 gi|154151083|ref|YP_001404701.1| - 8.4 5.9 10.1 3.2 7.3 0.3 2.6 1 1 1 2 2 2 0 Positive regulator of sigma(E), RseC/MucC DUF3571 PF12095.3 gi|154151084|ref|YP_001404702.1| - 0.055 13.6 0.1 0.12 12.6 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3571) ABC2_membrane PF01061.19 gi|154151086|ref|YP_001404704.1| - 0.17 11.0 5.5 0.18 10.9 3.8 1.0 1 0 0 1 1 1 0 ABC-2 type transporter ABC2_membrane_3 PF12698.2 gi|154151086|ref|YP_001404704.1| - 0.17 10.8 8.7 0.18 10.7 6.0 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF998 PF06197.8 gi|154151086|ref|YP_001404704.1| - 0.27 10.5 5.0 0.32 10.2 3.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF998) YtpI PF14007.1 gi|154151086|ref|YP_001404704.1| - 0.27 11.1 5.7 0.36 10.7 3.9 1.2 1 0 0 1 1 1 0 YtpI-like protein ABC2_membrane_4 PF12730.2 gi|154151086|ref|YP_001404704.1| - 0.42 9.7 5.6 0.43 9.6 3.9 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Herpes_LMP1 PF05297.6 gi|154151086|ref|YP_001404704.1| - 1.7 7.5 5.6 1.9 7.3 3.9 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) LCM PF04072.9 gi|154151087|ref|YP_001404705.1| - 5.5e-52 175.9 0.2 7.6e-52 175.5 0.2 1.2 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase BING4CT PF08149.6 gi|154151087|ref|YP_001404705.1| - 0.13 11.7 0.0 0.36 10.3 0.0 1.7 2 0 0 2 2 2 0 BING4CT (NUC141) domain TctB PF07331.6 gi|154151088|ref|YP_001404706.1| - 0.12 11.9 2.4 0.19 11.3 1.6 1.3 1 0 0 1 1 1 0 Tripartite tricarboxylate transporter TctB family SoxE PF06525.6 gi|154151088|ref|YP_001404706.1| - 2.6 7.2 14.3 4.6 6.4 9.9 1.5 1 1 0 1 1 1 0 Sulfocyanin (SoxE) Gp_UL130 PF11668.3 gi|154151089|ref|YP_001404707.1| - 0.073 12.5 0.0 0.091 12.2 0.0 1.1 1 0 0 1 1 1 0 HCMV glycoprotein pUL130 REGB_T4 PF10715.4 gi|154151090|ref|YP_001404708.1| - 0.12 12.4 0.1 0.14 12.2 0.1 1.1 1 0 0 1 1 1 0 Endoribonuclease RegB T4-bacteriophage encoded NUMOD4 PF07463.6 gi|154151090|ref|YP_001404708.1| - 0.9 9.4 3.4 1.3 9.0 0.5 2.3 1 1 1 2 2 2 0 NUMOD4 motif PAS_9 PF13426.1 gi|154151091|ref|YP_001404709.1| - 1.2e-15 57.7 0.0 2.7e-15 56.6 0.0 1.5 1 0 0 1 1 1 1 PAS domain PAS PF00989.19 gi|154151091|ref|YP_001404709.1| - 3.4e-14 52.5 0.0 7e-14 51.5 0.0 1.5 1 0 0 1 1 1 1 PAS fold HTH_20 PF12840.2 gi|154151091|ref|YP_001404709.1| - 1e-10 41.2 0.0 1.6e-10 40.6 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain PAS_4 PF08448.5 gi|154151091|ref|YP_001404709.1| - 8.9e-10 38.5 0.0 1.4e-09 37.9 0.0 1.3 1 0 0 1 1 1 1 PAS fold PAS_3 PF08447.6 gi|154151091|ref|YP_001404709.1| - 1e-05 25.5 0.1 1.9e-05 24.6 0.0 1.5 1 0 0 1 1 1 1 PAS fold HTH_24 PF13412.1 gi|154151091|ref|YP_001404709.1| - 0.00017 20.8 0.4 0.00036 19.8 0.0 1.7 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.7 gi|154151091|ref|YP_001404709.1| - 0.00063 19.3 0.1 0.0014 18.1 0.0 1.5 1 0 0 1 1 1 1 HTH domain HTH_5 PF01022.15 gi|154151091|ref|YP_001404709.1| - 0.001 18.6 0.1 0.0019 17.8 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family PAS_10 PF13596.1 gi|154151091|ref|YP_001404709.1| - 0.0018 18.4 0.0 0.0046 17.2 0.0 1.7 1 0 0 1 1 1 1 PAS domain TrmB PF01978.14 gi|154151091|ref|YP_001404709.1| - 0.0047 16.6 0.2 0.0082 15.8 0.2 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.12 gi|154151091|ref|YP_001404709.1| - 0.0048 16.3 0.1 0.0075 15.7 0.0 1.4 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_9 PF08221.6 gi|154151091|ref|YP_001404709.1| - 0.014 15.2 0.1 0.029 14.2 0.1 1.5 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain PAS_8 PF13188.1 gi|154151091|ref|YP_001404709.1| - 0.016 15.0 0.0 0.037 13.9 0.0 1.6 1 0 0 1 1 1 0 PAS domain MarR_2 PF12802.2 gi|154151091|ref|YP_001404709.1| - 0.018 14.6 0.0 0.032 13.9 0.0 1.3 1 0 0 1 1 1 0 MarR family MarR PF01047.17 gi|154151091|ref|YP_001404709.1| - 0.02 14.5 0.0 0.037 13.7 0.0 1.4 1 0 0 1 1 1 0 MarR family FaeA PF04703.7 gi|154151091|ref|YP_001404709.1| - 0.042 14.0 0.2 0.15 12.2 0.0 2.1 2 1 0 2 2 1 0 FaeA-like protein Sulfolobus_pRN PF05584.6 gi|154151091|ref|YP_001404709.1| - 0.058 13.3 0.0 0.11 12.5 0.0 1.5 1 0 0 1 1 1 0 Sulfolobus plasmid regulatory protein HTH_IclR PF09339.5 gi|154151091|ref|YP_001404709.1| - 0.066 12.8 0.0 0.11 12.1 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain PAS_6 PF08348.6 gi|154151091|ref|YP_001404709.1| - 0.087 12.3 0.0 0.27 10.8 0.0 1.8 2 0 0 2 2 2 0 YheO-like PAS domain Cache_3 PF14827.1 gi|154151091|ref|YP_001404709.1| - 0.087 12.7 0.0 0.42 10.5 0.0 2.1 2 0 0 2 2 2 0 Sensory domain of two-component sensor kinase DUF2582 PF10771.4 gi|154151091|ref|YP_001404709.1| - 0.089 12.6 0.0 0.21 11.4 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2582) DUF3821 PF12863.2 gi|154151093|ref|YP_001404711.1| - 2.1e-65 220.3 0.2 2.6e-65 220.0 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3821) Glyco_hydro_19 PF00182.14 gi|154151093|ref|YP_001404711.1| - 0.089 12.4 2.0 0.62 9.6 0.6 2.2 2 1 0 2 2 2 0 Chitinase class I CBS PF00571.23 gi|154151094|ref|YP_001404712.1| - 2.8e-30 103.8 2.6 7.9e-18 63.9 0.2 2.4 2 0 0 2 2 2 2 CBS domain Peptidase_M50 PF02163.17 gi|154151094|ref|YP_001404712.1| - 3.1e-17 62.1 16.3 8.7e-12 44.3 6.2 2.5 1 1 1 2 2 2 2 Peptidase family M50 YbgT_YccB PF08173.6 gi|154151094|ref|YP_001404712.1| - 3.7 7.4 12.9 11 5.8 0.1 3.8 3 0 0 3 3 3 0 Membrane bound YbgT-like protein SH3_6 PF12913.2 gi|154151096|ref|YP_001404714.1| - 0.018 14.2 0.0 0.027 13.6 0.0 1.3 1 0 0 1 1 1 0 SH3 domain of the SH3b1 type Flavin_Reduct PF01613.13 gi|154151097|ref|YP_001404715.1| - 1.9e-23 82.9 0.0 2.2e-23 82.7 0.0 1.1 1 0 0 1 1 1 1 Flavin reductase like domain RNase_H PF00075.19 gi|154151098|ref|YP_001404716.1| - 5.1e-17 62.4 0.0 6.3e-17 62.1 0.0 1.1 1 0 0 1 1 1 1 RNase H RVT_3 PF13456.1 gi|154151098|ref|YP_001404716.1| - 4.4e-14 52.0 0.1 5.8e-14 51.6 0.0 1.2 1 0 0 1 1 1 1 Reverse transcriptase-like DASH_Hsk3 PF08227.6 gi|154151098|ref|YP_001404716.1| - 0.051 13.7 0.5 0.093 12.9 0.3 1.3 1 0 0 1 1 1 0 DASH complex subunit Hsk3 like DeoC PF01791.4 gi|154151099|ref|YP_001404717.1| - 3.5e-50 170.5 0.0 4.1e-50 170.2 0.0 1.1 1 0 0 1 1 1 1 DeoC/LacD family aldolase PEP_mutase PF13714.1 gi|154151099|ref|YP_001404717.1| - 0.048 12.8 0.3 0.31 10.2 0.0 2.1 1 1 1 2 2 2 0 Phosphoenolpyruvate phosphomutase DeoC PF01791.4 gi|154151100|ref|YP_001404718.1| - 1.8e-49 168.1 0.0 2.1e-49 167.9 0.0 1.0 1 0 0 1 1 1 1 DeoC/LacD family aldolase PEP_mutase PF13714.1 gi|154151100|ref|YP_001404718.1| - 0.11 11.7 0.3 19 4.3 0.0 2.9 2 1 1 3 3 3 0 Phosphoenolpyruvate phosphomutase DHQS PF01959.11 gi|154151101|ref|YP_001404719.1| - 9.9e-132 438.9 0.9 1.1e-131 438.6 0.7 1.0 1 0 0 1 1 1 1 3-dehydroquinate synthase (EC 4.6.1.3) PDH PF02153.12 gi|154151102|ref|YP_001404720.1| - 6.1e-41 140.0 0.0 7.6e-41 139.6 0.0 1.0 1 0 0 1 1 1 1 Prephenate dehydrogenase F420_oxidored PF03807.12 gi|154151102|ref|YP_001404720.1| - 1.6e-06 28.4 1.1 0.0013 19.0 0.1 2.7 1 1 1 2 2 2 2 NADP oxidoreductase coenzyme F420-dependent DapB_N PF01113.15 gi|154151102|ref|YP_001404720.1| - 0.00068 19.5 0.1 0.0012 18.7 0.1 1.4 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus NAD_binding_2 PF03446.10 gi|154151102|ref|YP_001404720.1| - 0.002 17.9 0.4 0.06 13.1 0.2 2.4 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase 3HCDH_N PF02737.13 gi|154151102|ref|YP_001404720.1| - 0.016 14.8 0.3 0.54 9.8 0.1 2.2 1 1 1 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ApbA PF02558.11 gi|154151102|ref|YP_001404720.1| - 0.024 14.1 0.1 0.12 11.7 0.0 2.0 1 1 1 2 2 2 0 Ketopantoate reductase PanE/ApbA DUF2325 PF10087.4 gi|154151102|ref|YP_001404720.1| - 0.066 13.0 0.0 0.13 12.1 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2325) PDT PF00800.13 gi|154151103|ref|YP_001404721.1| - 1.2e-44 152.0 0.0 1.5e-44 151.7 0.0 1.1 1 0 0 1 1 1 1 Prephenate dehydratase ACT PF01842.20 gi|154151103|ref|YP_001404721.1| - 1.4e-07 30.8 0.0 2.9e-07 29.8 0.0 1.5 1 0 0 1 1 1 1 ACT domain EPSP_synthase PF00275.15 gi|154151104|ref|YP_001404722.1| - 5.3e-106 354.5 0.0 6.3e-106 354.3 0.0 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SKI PF01202.17 gi|154151105|ref|YP_001404723.1| - 3.3e-41 140.7 0.0 9.5e-41 139.3 0.0 1.8 2 0 0 2 2 2 1 Shikimate kinase Shikimate_dh_N PF08501.6 gi|154151105|ref|YP_001404723.1| - 2.4e-23 81.9 0.0 4.9e-23 80.9 0.0 1.6 1 0 0 1 1 1 1 Shikimate dehydrogenase substrate binding domain Shikimate_DH PF01488.15 gi|154151105|ref|YP_001404723.1| - 9.6e-13 48.4 0.0 2.4e-12 47.0 0.0 1.7 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase AAA_17 PF13207.1 gi|154151105|ref|YP_001404723.1| - 5.4e-06 27.2 0.0 2.6e-05 25.0 0.0 2.2 2 1 0 2 2 2 1 AAA domain 2-Hacid_dh_C PF02826.14 gi|154151105|ref|YP_001404723.1| - 0.00029 20.0 0.0 0.001 18.2 0.0 1.9 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.12 gi|154151105|ref|YP_001404723.1| - 0.00029 21.1 0.0 0.0009 19.6 0.0 1.8 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent AAA PF00004.24 gi|154151105|ref|YP_001404723.1| - 0.00063 19.9 0.0 0.0022 18.2 0.0 1.9 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.1 gi|154151105|ref|YP_001404723.1| - 0.002 18.0 0.1 0.032 14.0 0.0 2.6 2 1 0 2 2 2 1 AAA domain Cytidylate_kin2 PF13189.1 gi|154151105|ref|YP_001404723.1| - 0.0021 17.9 0.0 0.011 15.6 0.0 2.0 2 0 0 2 2 2 1 Cytidylate kinase-like family Saccharop_dh PF03435.13 gi|154151105|ref|YP_001404723.1| - 0.0028 16.6 0.0 0.0048 15.9 0.0 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase GFO_IDH_MocA PF01408.17 gi|154151105|ref|YP_001404723.1| - 0.008 16.6 0.0 0.02 15.4 0.0 1.7 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold AAA_19 PF13245.1 gi|154151105|ref|YP_001404723.1| - 0.027 14.1 0.3 0.71 9.6 0.0 2.8 2 0 0 2 2 2 0 Part of AAA domain AAA_18 PF13238.1 gi|154151105|ref|YP_001404723.1| - 0.059 13.6 0.0 0.16 12.2 0.0 1.8 1 1 0 1 1 1 0 AAA domain Chorismate_synt PF01264.16 gi|154151106|ref|YP_001404724.1| - 2e-129 431.0 6.4 1.9e-68 230.4 0.0 2.0 1 1 1 2 2 2 2 Chorismate synthase Cache_3 PF14827.1 gi|154151107|ref|YP_001404725.1| - 0.0077 16.1 0.0 0.011 15.6 0.0 1.3 1 0 0 1 1 1 1 Sensory domain of two-component sensor kinase MacB_PCD PF12704.2 gi|154151107|ref|YP_001404725.1| - 0.04 13.4 0.4 0.077 12.5 0.1 1.7 2 0 0 2 2 2 0 MacB-like periplasmic core domain MFS_1 PF07690.11 gi|154151108|ref|YP_001404726.1| - 8.7e-42 143.0 57.9 2.2e-40 138.4 38.0 2.4 2 1 0 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|154151108|ref|YP_001404726.1| - 7.1e-09 34.7 51.3 7.7e-08 31.3 12.6 3.5 2 2 1 3 3 3 2 Sugar (and other) transporter MFS_1_like PF12832.2 gi|154151108|ref|YP_001404726.1| - 0.00035 20.3 0.2 0.00035 20.3 0.1 3.7 3 1 0 3 3 3 1 MFS_1 like family DUF3149 PF11346.3 gi|154151108|ref|YP_001404726.1| - 0.045 13.3 0.4 0.045 13.3 0.2 3.8 3 0 0 3 3 3 0 Protein of unknown function (DUF3149) MFS_2 PF13347.1 gi|154151108|ref|YP_001404726.1| - 0.073 11.4 49.5 0.86 7.9 4.8 3.6 1 1 0 2 2 2 0 MFS/sugar transport protein TetR_N PF00440.18 gi|154151109|ref|YP_001404727.1| - 3.6e-18 64.9 0.0 6e-18 64.2 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_6 PF13977.1 gi|154151109|ref|YP_001404727.1| - 2.9e-07 30.4 0.1 9.3e-07 28.8 0.1 1.8 1 1 0 1 1 1 1 Bacterial transcriptional repressor HTH_23 PF13384.1 gi|154151109|ref|YP_001404727.1| - 0.022 14.3 0.1 0.069 12.8 0.0 1.9 2 0 0 2 2 2 0 Homeodomain-like domain Tail_P2_I PF09684.5 gi|154151109|ref|YP_001404727.1| - 0.028 13.9 0.0 0.077 12.5 0.0 1.7 2 0 0 2 2 2 0 Phage tail protein (Tail_P2_I) HTH_7 PF02796.10 gi|154151109|ref|YP_001404727.1| - 0.033 14.0 0.3 0.11 12.4 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase Sigma70_r4 PF04545.11 gi|154151109|ref|YP_001404727.1| - 0.048 12.9 0.0 0.18 11.1 0.0 2.0 2 0 0 2 2 2 0 Sigma-70, region 4 DUF2284 PF10050.4 gi|154151110|ref|YP_001404728.1| - 4.5e-52 176.0 0.0 5.3e-52 175.7 0.0 1.1 1 0 0 1 1 1 1 Predicted metal-binding protein (DUF2284) Lactamase_B PF00753.22 gi|154151111|ref|YP_001404729.1| - 3.6e-11 43.0 0.1 5.3e-11 42.5 0.1 1.6 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|154151111|ref|YP_001404729.1| - 4.4e-07 29.6 0.0 5.1e-06 26.1 0.0 2.2 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.1 gi|154151111|ref|YP_001404729.1| - 0.0024 17.6 0.1 0.022 14.4 0.1 2.1 1 1 0 1 1 1 1 Beta-lactamase superfamily domain DHquinase_I PF01487.10 gi|154151112|ref|YP_001404730.1| - 1.6e-39 135.9 0.0 1.8e-39 135.6 0.0 1.0 1 0 0 1 1 1 1 Type I 3-dehydroquinase Sm_multidrug_ex PF06695.6 gi|154151113|ref|YP_001404731.1| - 0.019 15.1 2.3 0.019 15.1 1.6 2.5 1 1 1 2 2 2 0 Putative small multi-drug export protein Peptidase_U32 PF01136.14 gi|154151114|ref|YP_001404732.1| - 3.2e-111 369.8 0.0 3.2e-81 271.6 0.0 2.1 2 0 0 2 2 2 2 Peptidase family U32 DUF3656 PF12392.3 gi|154151114|ref|YP_001404732.1| - 1.4e-20 73.6 0.0 2.4e-20 72.8 0.0 1.4 1 0 0 1 1 1 1 Collagenase TIM PF00121.13 gi|154151115|ref|YP_001404733.1| - 1.3e-26 93.1 0.4 2.1e-24 85.9 0.3 2.0 1 1 0 1 1 1 1 Triosephosphate isomerase ThiG PF05690.9 gi|154151115|ref|YP_001404733.1| - 0.00019 20.6 0.9 0.00031 19.8 0.6 1.4 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG His_biosynth PF00977.16 gi|154151115|ref|YP_001404733.1| - 0.012 14.8 0.1 0.02 14.1 0.1 1.5 1 1 0 1 1 1 0 Histidine biosynthesis protein IglC PF11550.3 gi|154151115|ref|YP_001404733.1| - 0.06 12.6 0.8 0.1 11.9 0.6 1.5 1 0 0 1 1 1 0 Intracellular growth locus C protein PcrB PF01884.12 gi|154151115|ref|YP_001404733.1| - 0.093 11.9 0.1 0.14 11.4 0.1 1.3 1 0 0 1 1 1 0 PcrB family FMN_dh PF01070.13 gi|154151115|ref|YP_001404733.1| - 0.3 9.9 2.4 0.5 9.1 0.5 1.9 1 1 1 2 2 2 0 FMN-dependent dehydrogenase CBS PF00571.23 gi|154151116|ref|YP_001404734.1| - 1.1e-24 85.8 0.3 5.4e-14 51.7 0.0 2.2 2 0 0 2 2 2 2 CBS domain HTH_31 PF13560.1 gi|154151116|ref|YP_001404734.1| - 2.3e-12 46.9 0.5 4.7e-12 45.9 0.4 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_3 PF01381.17 gi|154151116|ref|YP_001404734.1| - 3.9e-12 45.8 0.2 8.9e-12 44.6 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.2 gi|154151116|ref|YP_001404734.1| - 2.1e-09 37.2 0.0 4e-09 36.3 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.1 gi|154151116|ref|YP_001404734.1| - 5e-05 22.8 0.4 0.00042 19.8 0.1 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_26 PF13443.1 gi|154151116|ref|YP_001404734.1| - 0.00024 21.2 0.0 0.00044 20.3 0.0 1.4 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain MarR_2 PF12802.2 gi|154151116|ref|YP_001404734.1| - 0.00032 20.3 0.2 0.087 12.5 0.1 2.4 2 0 0 2 2 2 1 MarR family HTH_37 PF13744.1 gi|154151116|ref|YP_001404734.1| - 0.0018 18.0 0.1 0.0046 16.7 0.1 1.8 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.1 gi|154151116|ref|YP_001404734.1| - 0.012 15.1 0.2 0.028 14.0 0.1 1.5 1 0 0 1 1 1 0 Homeodomain-like domain HTH_24 PF13412.1 gi|154151116|ref|YP_001404734.1| - 0.069 12.5 0.7 0.17 11.3 0.1 2.0 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.5 gi|154151116|ref|YP_001404734.1| - 0.071 12.7 0.3 0.16 11.5 0.2 1.6 1 0 0 1 1 1 0 IclR helix-turn-helix domain Sigma70_r4 PF04545.11 gi|154151116|ref|YP_001404734.1| - 0.088 12.1 0.6 0.16 11.2 0.4 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 MarR PF01047.17 gi|154151116|ref|YP_001404734.1| - 0.12 12.0 0.0 0.32 10.7 0.0 1.7 1 0 0 1 1 1 0 MarR family Adenine_deam_C PF13382.1 gi|154151117|ref|YP_001404735.1| - 9.9e-52 174.5 0.1 1.4e-51 174.0 0.0 1.2 1 0 0 1 1 1 1 Adenine deaminase C-terminal domain Amidohydro_1 PF01979.15 gi|154151117|ref|YP_001404735.1| - 1.5e-26 93.8 0.0 2.4e-24 86.6 0.0 2.4 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_4 PF13147.1 gi|154151117|ref|YP_001404735.1| - 5.5e-15 56.1 16.2 4.7e-09 36.6 0.1 3.0 3 0 0 3 3 3 2 Amidohydrolase Amidohydro_5 PF13594.1 gi|154151117|ref|YP_001404735.1| - 2.4e-10 40.0 0.4 7.1e-10 38.5 0.3 1.9 1 0 0 1 1 1 1 Amidohydrolase Amidohydro_3 PF07969.6 gi|154151117|ref|YP_001404735.1| - 3e-07 30.0 0.3 0.00047 19.4 0.0 2.4 2 0 0 2 2 2 2 Amidohydrolase family Urease_alpha PF00449.15 gi|154151117|ref|YP_001404735.1| - 0.0025 17.9 0.1 0.022 14.9 0.0 2.1 2 0 0 2 2 2 1 Urease alpha-subunit, N-terminal domain DoxA PF07680.6 gi|154151118|ref|YP_001404736.1| - 0.04 13.5 0.2 3.3 7.3 0.0 2.1 1 1 0 2 2 2 0 TQO small subunit DoxA Alph_Pro_TM PF09608.5 gi|154151118|ref|YP_001404736.1| - 0.043 13.3 0.1 0.06 12.8 0.0 1.3 1 0 0 1 1 1 0 Putative transmembrane protein (Alph_Pro_TM) FliD_N PF02465.13 gi|154151118|ref|YP_001404736.1| - 0.071 13.4 0.0 0.099 13.0 0.0 1.2 1 0 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus Y_Y_Y PF07495.8 gi|154151118|ref|YP_001404736.1| - 0.12 12.1 0.0 0.2 11.4 0.0 1.5 1 0 0 1 1 1 0 Y_Y_Y domain CbiA PF01656.18 gi|154151119|ref|YP_001404737.1| - 2.6e-19 69.4 0.0 4.6e-19 68.6 0.0 1.5 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fer4_NifH PF00142.13 gi|154151119|ref|YP_001404737.1| - 0.019 14.1 0.0 1.4 8.0 0.0 2.1 2 0 0 2 2 2 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family MipZ PF09140.6 gi|154151119|ref|YP_001404737.1| - 0.029 13.4 0.0 0.047 12.7 0.0 1.3 1 0 0 1 1 1 0 ATPase MipZ YhjQ PF06564.7 gi|154151119|ref|YP_001404737.1| - 0.17 11.2 0.0 0.57 9.5 0.0 1.7 2 0 0 2 2 2 0 YhjQ protein MCPsignal PF00015.16 gi|154151120|ref|YP_001404738.1| - 1.4e-50 171.7 64.2 9.3e-50 169.1 26.1 4.1 2 1 1 3 3 3 2 Methyl-accepting chemotaxis protein (MCP) signalling domain PAS_9 PF13426.1 gi|154151120|ref|YP_001404738.1| - 6.2e-16 58.6 0.0 2.3e-08 34.3 0.0 3.2 3 0 0 3 3 3 2 PAS domain PAS_4 PF08448.5 gi|154151120|ref|YP_001404738.1| - 6.7e-14 51.8 0.6 3.9e-05 23.6 0.0 4.3 4 1 0 4 4 4 2 PAS fold PAS PF00989.19 gi|154151120|ref|YP_001404738.1| - 5.5e-11 42.2 0.0 0.0001 22.0 0.0 3.1 3 0 0 3 3 3 2 PAS fold PAS_8 PF13188.1 gi|154151120|ref|YP_001404738.1| - 0.00011 21.8 0.0 0.0063 16.3 0.0 2.8 2 0 0 2 2 2 1 PAS domain HAMP PF00672.20 gi|154151120|ref|YP_001404738.1| - 0.0016 18.5 13.1 0.011 15.8 0.1 5.1 4 1 0 4 4 4 1 HAMP domain DUF948 PF06103.6 gi|154151120|ref|YP_001404738.1| - 0.0034 17.2 2.3 0.0034 17.2 1.6 5.7 5 1 1 6 6 6 2 Bacterial protein of unknown function (DUF948) PAS_10 PF13596.1 gi|154151120|ref|YP_001404738.1| - 0.0047 17.1 0.1 1.9 8.8 0.0 4.1 3 2 1 4 4 4 1 PAS domain APG17 PF04108.7 gi|154151120|ref|YP_001404738.1| - 0.89 8.2 20.9 0.097 11.4 1.8 3.4 1 1 0 2 2 2 0 Autophagy protein Apg17 Img2 PF05046.9 gi|154151120|ref|YP_001404738.1| - 1.1 9.5 5.9 1.9 8.8 0.4 3.5 3 1 2 5 5 4 0 Mitochondrial large subunit ribosomal protein (Img2) DUF489 PF04356.7 gi|154151120|ref|YP_001404738.1| - 1.9 8.0 14.9 0.019 14.5 3.4 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF489) Reo_sigmaC PF04582.7 gi|154151120|ref|YP_001404738.1| - 4.9 6.2 30.4 0.29 10.2 7.4 3.3 2 1 1 3 3 3 0 Reovirus sigma C capsid protein CheW PF01584.14 gi|154151121|ref|YP_001404739.1| - 7.6e-30 103.1 1.0 8.5e-30 103.0 0.7 1.0 1 0 0 1 1 1 1 CheW-like domain MCPsignal PF00015.16 gi|154151122|ref|YP_001404740.1| - 8.8e-49 165.9 59.3 1.6e-47 161.8 22.9 4.2 2 1 1 3 3 3 2 Methyl-accepting chemotaxis protein (MCP) signalling domain PAS_9 PF13426.1 gi|154151122|ref|YP_001404740.1| - 6.1e-41 139.0 0.0 2.7e-09 37.3 0.0 5.4 6 1 0 6 6 6 4 PAS domain PAS_4 PF08448.5 gi|154151122|ref|YP_001404740.1| - 2.4e-34 117.6 0.0 7e-08 32.4 0.0 5.1 4 0 0 4 4 4 4 PAS fold PAS PF00989.19 gi|154151122|ref|YP_001404740.1| - 3.3e-25 88.0 0.0 5.8e-06 26.0 0.0 4.6 4 0 0 4 4 4 4 PAS fold PAS_8 PF13188.1 gi|154151122|ref|YP_001404740.1| - 1.1e-18 66.3 0.1 0.00083 19.1 0.0 5.8 5 1 1 6 6 6 4 PAS domain PAS_7 PF12860.2 gi|154151122|ref|YP_001404740.1| - 0.0012 18.8 0.2 4.4 7.3 0.0 5.9 6 2 0 6 6 6 1 PAS fold PAS_10 PF13596.1 gi|154151122|ref|YP_001404740.1| - 0.0012 19.0 0.0 10 6.4 0.0 4.6 5 0 0 5 5 5 1 PAS domain Reo_sigmaC PF04582.7 gi|154151122|ref|YP_001404740.1| - 2.8 7.0 31.4 2.4 7.2 9.2 3.1 1 1 2 4 4 4 0 Reovirus sigma C capsid protein LOH1CR12 PF10158.4 gi|154151122|ref|YP_001404740.1| - 3.5 7.4 12.7 7.8 6.2 0.3 4.5 2 2 2 4 4 4 0 Tumour suppressor protein CheR PF01739.13 gi|154151123|ref|YP_001404741.1| - 1.6e-58 197.2 0.0 2.3e-58 196.7 0.0 1.2 1 0 0 1 1 1 1 CheR methyltransferase, SAM binding domain CheR_N PF03705.10 gi|154151123|ref|YP_001404741.1| - 1.1e-13 50.3 1.2 1.8e-13 49.6 0.8 1.4 1 0 0 1 1 1 1 CheR methyltransferase, all-alpha domain Methyltransf_12 PF08242.7 gi|154151123|ref|YP_001404741.1| - 0.0013 19.1 0.0 0.0076 16.7 0.0 2.1 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|154151123|ref|YP_001404741.1| - 0.025 15.1 0.0 0.047 14.2 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain DUF466 PF04328.8 gi|154151123|ref|YP_001404741.1| - 0.061 13.1 0.0 0.17 11.7 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF466) YfhO PF09586.5 gi|154151124|ref|YP_001404742.1| - 0.0015 16.6 0.1 0.0015 16.6 0.1 1.0 1 0 0 1 1 1 1 Bacterial membrane protein YfhO DUF4131 PF13567.1 gi|154151124|ref|YP_001404742.1| - 0.003 16.9 0.0 0.0036 16.7 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4131) TMEM220 PF15071.1 gi|154151124|ref|YP_001404742.1| - 0.0033 17.8 0.5 0.0039 17.6 0.3 1.1 1 0 0 1 1 1 1 Transmembrane family 220, helix YajC PF02699.10 gi|154151124|ref|YP_001404742.1| - 0.012 15.2 0.1 0.012 15.2 0.1 1.8 2 0 0 2 2 2 0 Preprotein translocase subunit CitMHS PF03600.11 gi|154151124|ref|YP_001404742.1| - 0.015 13.9 0.8 0.016 13.8 0.6 1.0 1 0 0 1 1 1 0 Citrate transporter DUF1469 PF07332.6 gi|154151124|ref|YP_001404742.1| - 0.017 14.8 0.4 0.022 14.5 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1469) YwiC PF14256.1 gi|154151124|ref|YP_001404742.1| - 0.02 14.9 1.3 0.023 14.7 0.9 1.1 1 0 0 1 1 1 0 YwiC-like protein DUF4320 PF14208.1 gi|154151124|ref|YP_001404742.1| - 0.054 13.4 0.1 0.096 12.6 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4320) DUF4149 PF13664.1 gi|154151124|ref|YP_001404742.1| - 0.064 13.3 2.6 0.086 12.9 1.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4149) FA_desaturase PF00487.19 gi|154151124|ref|YP_001404742.1| - 0.075 12.4 2.5 0.086 12.2 1.7 1.0 1 0 0 1 1 1 0 Fatty acid desaturase DUF2142 PF09913.4 gi|154151124|ref|YP_001404742.1| - 0.095 11.3 3.0 0.11 11.1 2.1 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2142) Orai-1 PF07856.7 gi|154151124|ref|YP_001404742.1| - 0.12 11.8 2.9 0.14 11.7 2.0 1.1 1 0 0 1 1 1 0 Mediator of CRAC channel activity RseC_MucC PF04246.7 gi|154151124|ref|YP_001404742.1| - 0.13 11.8 0.8 0.15 11.5 0.5 1.1 1 0 0 1 1 1 0 Positive regulator of sigma(E), RseC/MucC DUF4381 PF14316.1 gi|154151124|ref|YP_001404742.1| - 0.32 11.0 0.0 0.32 11.0 0.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4381) 2TM PF13239.1 gi|154151124|ref|YP_001404742.1| - 0.32 11.0 3.2 0.52 10.4 2.2 1.3 1 0 0 1 1 1 0 2TM domain DUF2500 PF10694.4 gi|154151124|ref|YP_001404742.1| - 4.4 7.3 5.2 0.56 10.2 0.3 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2500) SSP160 PF06933.6 gi|154151125|ref|YP_001404743.1| - 9.6 4.0 10.2 13 3.6 7.1 1.2 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 DHH PF01368.15 gi|154151128|ref|YP_001404746.1| - 9.4e-11 41.5 0.0 2e-10 40.4 0.0 1.5 1 0 0 1 1 1 1 DHH family S1 PF00575.18 gi|154151128|ref|YP_001404746.1| - 1.2e-07 31.6 0.8 2.4e-07 30.7 0.1 1.9 2 0 0 2 2 2 1 S1 RNA binding domain tRNA_anti-codon PF01336.20 gi|154151128|ref|YP_001404746.1| - 3e-07 30.2 0.1 8.7e-07 28.7 0.1 1.8 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA_anti-like PF12869.2 gi|154151128|ref|YP_001404746.1| - 0.0092 15.4 0.4 0.016 14.6 0.3 1.5 1 0 0 1 1 1 1 tRNA_anti-like Pribosyltran PF00156.22 gi|154151132|ref|YP_001404750.1| - 8.1e-22 77.2 0.1 1.2e-21 76.7 0.1 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.1 gi|154151132|ref|YP_001404750.1| - 0.011 14.9 0.1 0.015 14.5 0.0 1.2 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase Lactamase_B_2 PF12706.2 gi|154151133|ref|YP_001404751.1| - 4.2e-35 121.0 0.0 6.4e-35 120.4 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.22 gi|154151133|ref|YP_001404751.1| - 8e-16 58.2 0.1 4e-13 49.4 0.0 2.8 2 1 1 3 3 3 2 Metallo-beta-lactamase superfamily AP_endonuc_2 PF01261.19 gi|154151134|ref|YP_001404752.1| - 3.1e-23 82.1 0.1 4.2e-23 81.7 0.1 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel AAA_18 PF13238.1 gi|154151135|ref|YP_001404753.1| - 4.4e-11 43.1 0.0 5.8e-11 42.8 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|154151135|ref|YP_001404753.1| - 1.5e-08 35.4 0.0 1.8e-08 35.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.1 gi|154151135|ref|YP_001404753.1| - 2.2e-05 24.3 0.0 4e-05 23.5 0.0 1.4 1 1 0 1 1 1 1 AAA domain ADK PF00406.17 gi|154151135|ref|YP_001404753.1| - 0.01 15.7 0.0 0.014 15.2 0.0 1.4 1 0 0 1 1 1 0 Adenylate kinase Radical_SAM PF04055.16 gi|154151136|ref|YP_001404754.1| - 6.8e-18 65.3 0.0 9.7e-18 64.8 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|154151136|ref|YP_001404754.1| - 8e-12 45.2 0.0 1.4e-11 44.4 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|154151136|ref|YP_001404754.1| - 3.1e-11 43.5 0.0 9.5e-11 41.9 0.0 1.7 2 0 0 2 2 2 1 4Fe-4S single cluster domain HAUS5 PF14817.1 gi|154151136|ref|YP_001404754.1| - 0.13 10.8 0.0 0.16 10.4 0.0 1.1 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 5 ThiC PF01964.13 gi|154151137|ref|YP_001404755.1| - 3.7e-183 608.8 1.8 4.2e-183 608.6 1.3 1.0 1 0 0 1 1 1 1 ThiC family AAA PF00004.24 gi|154151138|ref|YP_001404756.1| - 2e-92 306.2 0.0 6.4e-46 155.8 0.0 3.0 3 0 0 3 3 2 2 ATPase family associated with various cellular activities (AAA) CDC48_N PF02359.13 gi|154151138|ref|YP_001404756.1| - 1.4e-22 79.3 0.6 8.9e-22 76.8 0.6 2.3 2 0 0 2 2 1 1 Cell division protein 48 (CDC48), N-terminal domain AAA_2 PF07724.9 gi|154151138|ref|YP_001404756.1| - 2.5e-14 53.5 0.0 2.6e-07 30.7 0.0 2.3 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) RuvB_N PF05496.7 gi|154151138|ref|YP_001404756.1| - 1.2e-13 50.6 0.0 1.3e-07 30.9 0.0 2.9 2 1 0 2 2 2 2 Holliday junction DNA helicase ruvB N-terminus AAA_22 PF13401.1 gi|154151138|ref|YP_001404756.1| - 3.5e-12 46.5 0.5 0.0026 17.9 0.0 5.0 3 2 0 3 3 3 2 AAA domain AAA_16 PF13191.1 gi|154151138|ref|YP_001404756.1| - 1.9e-11 44.2 0.1 1.2e-05 25.3 0.0 3.2 2 1 0 2 2 2 2 AAA ATPase domain AAA_33 PF13671.1 gi|154151138|ref|YP_001404756.1| - 3.3e-11 43.2 0.0 0.00027 20.8 0.0 2.9 3 0 0 3 3 2 2 AAA domain TIP49 PF06068.8 gi|154151138|ref|YP_001404756.1| - 6.5e-11 41.5 0.0 0.00016 20.5 0.0 2.5 2 0 0 2 2 2 2 TIP49 C-terminus CDC48_2 PF02933.12 gi|154151138|ref|YP_001404756.1| - 1.9e-10 40.2 0.1 4.9e-10 38.9 0.1 1.7 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), domain 2 AAA_17 PF13207.1 gi|154151138|ref|YP_001404756.1| - 2.8e-10 41.0 0.2 0.00042 21.1 0.0 3.6 4 0 0 4 4 2 2 AAA domain AAA_5 PF07728.9 gi|154151138|ref|YP_001404756.1| - 2.4e-09 37.0 3.4 0.01 15.5 0.0 5.1 3 2 0 3 3 3 2 AAA domain (dynein-related subfamily) AAA_14 PF13173.1 gi|154151138|ref|YP_001404756.1| - 1.2e-08 34.9 0.0 0.0055 16.6 0.0 3.0 4 0 0 4 4 2 2 AAA domain AAA_19 PF13245.1 gi|154151138|ref|YP_001404756.1| - 5.2e-08 32.5 3.9 0.0084 15.8 0.0 3.8 4 0 0 4 4 3 2 Part of AAA domain IstB_IS21 PF01695.12 gi|154151138|ref|YP_001404756.1| - 2.2e-07 30.4 0.1 0.017 14.5 0.0 2.6 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_18 PF13238.1 gi|154151138|ref|YP_001404756.1| - 2.9e-07 30.8 0.1 0.042 14.1 0.0 3.1 3 0 0 3 3 2 2 AAA domain RNA_helicase PF00910.17 gi|154151138|ref|YP_001404756.1| - 5.8e-07 29.6 0.0 0.0073 16.4 0.0 2.6 2 0 0 2 2 2 2 RNA helicase AAA_28 PF13521.1 gi|154151138|ref|YP_001404756.1| - 1.5e-06 28.3 0.0 0.068 13.1 0.0 2.6 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.16 gi|154151138|ref|YP_001404756.1| - 1.6e-06 27.4 0.2 0.059 12.5 0.1 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI Zeta_toxin PF06414.7 gi|154151138|ref|YP_001404756.1| - 2.6e-06 26.6 0.0 0.071 12.2 0.0 2.8 2 0 0 2 2 2 2 Zeta toxin AAA_25 PF13481.1 gi|154151138|ref|YP_001404756.1| - 2e-05 24.1 6.7 0.6 9.4 0.1 4.3 2 2 2 4 4 4 2 AAA domain AAA_24 PF13479.1 gi|154151138|ref|YP_001404756.1| - 2.5e-05 23.9 0.1 0.25 10.8 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_3 PF07726.6 gi|154151138|ref|YP_001404756.1| - 3.3e-05 23.5 0.0 0.27 10.8 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) Parvo_NS1 PF01057.12 gi|154151138|ref|YP_001404756.1| - 3.9e-05 22.6 0.1 0.031 13.1 0.0 2.6 3 0 0 3 3 3 1 Parvovirus non-structural protein NS1 PhoH PF02562.11 gi|154151138|ref|YP_001404756.1| - 8.3e-05 21.9 0.1 0.61 9.2 0.0 3.1 3 0 0 3 3 3 2 PhoH-like protein KaiC PF06745.8 gi|154151138|ref|YP_001404756.1| - 8.5e-05 21.7 0.5 1.9 7.5 0.0 4.0 4 0 0 4 4 4 2 KaiC ABC_tran PF00005.22 gi|154151138|ref|YP_001404756.1| - 0.00013 22.2 0.0 2.3 8.5 0.0 3.8 3 0 0 3 3 3 1 ABC transporter Sigma54_activat PF00158.21 gi|154151138|ref|YP_001404756.1| - 0.00021 20.8 0.1 0.7 9.3 0.0 3.2 2 2 0 2 2 2 2 Sigma-54 interaction domain NB-ARC PF00931.17 gi|154151138|ref|YP_001404756.1| - 0.00025 19.9 0.0 0.17 10.7 0.0 2.5 2 0 0 2 2 2 1 NB-ARC domain Arch_ATPase PF01637.13 gi|154151138|ref|YP_001404756.1| - 0.00048 19.9 0.5 1.6 8.3 0.0 3.6 3 1 1 4 4 3 1 Archaeal ATPase Bac_DnaA PF00308.13 gi|154151138|ref|YP_001404756.1| - 0.00075 19.2 0.0 0.099 12.2 0.0 2.6 2 1 0 2 2 2 1 Bacterial dnaA protein DUF2075 PF09848.4 gi|154151138|ref|YP_001404756.1| - 0.0014 17.6 0.0 0.4 9.6 0.0 2.3 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) DUF815 PF05673.8 gi|154151138|ref|YP_001404756.1| - 0.0015 17.4 0.0 1.3 7.8 0.0 2.7 2 0 0 2 2 2 2 Protein of unknown function (DUF815) UPF0079 PF02367.12 gi|154151138|ref|YP_001404756.1| - 0.0024 17.4 0.1 0.84 9.2 0.0 3.0 3 0 0 3 3 3 1 Uncharacterised P-loop hydrolase UPF0079 AAA_11 PF13086.1 gi|154151138|ref|YP_001404756.1| - 0.0028 17.2 0.1 2.4 7.6 0.0 2.9 2 1 0 2 2 2 1 AAA domain Sigma54_activ_2 PF14532.1 gi|154151138|ref|YP_001404756.1| - 0.0051 16.8 0.0 4.6 7.2 0.0 2.4 2 0 0 2 2 2 0 Sigma-54 interaction domain Vps4_C PF09336.5 gi|154151138|ref|YP_001404756.1| - 0.0075 16.1 0.1 0.051 13.4 0.0 2.3 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain NACHT PF05729.7 gi|154151138|ref|YP_001404756.1| - 0.0076 15.9 4.4 0.67 9.5 0.1 3.6 4 1 1 5 5 3 1 NACHT domain ResIII PF04851.10 gi|154151138|ref|YP_001404756.1| - 0.015 15.1 0.0 6.6 6.5 0.0 2.7 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit AAA_30 PF13604.1 gi|154151138|ref|YP_001404756.1| - 0.035 13.6 0.0 4 6.9 0.0 2.6 2 0 0 2 2 2 0 AAA domain AFG1_ATPase PF03969.11 gi|154151138|ref|YP_001404756.1| - 0.037 12.8 0.0 2.5 6.7 0.0 2.5 2 0 0 2 2 2 0 AFG1-like ATPase SKI PF01202.17 gi|154151138|ref|YP_001404756.1| - 0.038 13.8 0.5 9.1 6.1 0.0 2.8 3 0 0 3 3 2 0 Shikimate kinase NTPase_1 PF03266.10 gi|154151138|ref|YP_001404756.1| - 0.067 12.9 4.5 14 5.3 0.1 4.3 3 2 1 5 5 4 0 NTPase Zot PF05707.7 gi|154151138|ref|YP_001404756.1| - 0.088 12.2 1.6 33 3.8 0.1 3.9 2 2 0 2 2 2 0 Zonular occludens toxin (Zot) Viral_helicase1 PF01443.13 gi|154151138|ref|YP_001404756.1| - 0.09 12.2 0.0 1.2 8.5 0.0 2.2 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase KTI12 PF08433.5 gi|154151138|ref|YP_001404756.1| - 0.091 11.9 0.0 10 5.2 0.0 2.4 2 0 0 2 2 2 0 Chromatin associated protein KTI12 AAA_23 PF13476.1 gi|154151138|ref|YP_001404756.1| - 0.83 9.9 3.4 14 5.9 0.0 3.4 3 0 0 3 3 3 0 AAA domain PMT_2 PF13231.1 gi|154151139|ref|YP_001404757.1| - 8.7e-32 110.2 18.3 8.7e-32 110.2 12.7 3.6 3 1 0 3 3 3 1 Dolichyl-phosphate-mannose-protein mannosyltransferase PMT PF02366.13 gi|154151139|ref|YP_001404757.1| - 3.1e-13 49.6 16.1 3.1e-13 49.6 11.2 1.9 3 0 0 3 3 3 1 Dolichyl-phosphate-mannose-protein mannosyltransferase DUF2723 PF11028.3 gi|154151139|ref|YP_001404757.1| - 0.045 13.2 9.7 0.15 11.5 6.7 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF2723) GtrA PF04138.9 gi|154151140|ref|YP_001404758.1| - 1.3e-25 89.6 15.0 1.5e-25 89.3 10.4 1.0 1 0 0 1 1 1 1 GtrA-like protein ABC2_membrane_4 PF12730.2 gi|154151140|ref|YP_001404758.1| - 0.0024 17.0 9.7 0.0024 17.0 6.7 1.5 1 1 0 1 1 1 1 ABC-2 family transporter protein IncA PF04156.9 gi|154151141|ref|YP_001404759.1| - 0.045 13.3 8.2 0.049 13.2 5.7 1.2 1 0 0 1 1 1 0 IncA protein COPI_assoc PF08507.5 gi|154151141|ref|YP_001404759.1| - 0.081 12.6 7.0 0.092 12.4 4.9 1.2 1 0 0 1 1 1 0 COPI associated protein DUF308 PF03729.8 gi|154151141|ref|YP_001404759.1| - 0.09 12.7 14.6 0.16 11.9 2.1 2.0 1 1 1 2 2 2 0 Short repeat of unknown function (DUF308) DUF3953 PF13129.1 gi|154151141|ref|YP_001404759.1| - 0.37 10.4 14.7 1.1 8.9 10.2 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3953) DuoxA PF10204.4 gi|154151141|ref|YP_001404759.1| - 0.89 8.5 6.4 0.88 8.5 4.4 1.0 1 0 0 1 1 1 0 Dual oxidase maturation factor DUF1430 PF07242.6 gi|154151141|ref|YP_001404759.1| - 0.93 9.5 6.4 1.1 9.3 4.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1430) UPF0104 PF03706.8 gi|154151141|ref|YP_001404759.1| - 1 8.5 7.6 1.1 8.4 5.2 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0104) NfeD PF01957.13 gi|154151141|ref|YP_001404759.1| - 1.1 9.4 6.9 1.1 9.3 4.8 1.1 1 0 0 1 1 1 0 NfeD-like C-terminal, partner-binding DUF1700 PF08006.6 gi|154151141|ref|YP_001404759.1| - 1.5 8.1 8.5 1.6 7.9 5.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) DUF3487 PF11990.3 gi|154151141|ref|YP_001404759.1| - 1.9 7.9 7.6 2 7.8 5.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3487) SdpI PF13630.1 gi|154151141|ref|YP_001404759.1| - 3.6 7.3 14.6 5.1 6.8 10.1 1.3 1 0 0 1 1 1 0 SdpI/YhfL protein family SVM_signal PF12113.3 gi|154151141|ref|YP_001404759.1| - 5 7.0 7.5 2.8 7.8 0.2 2.2 2 0 0 2 2 2 0 SVM protein signal sequence DUF3040 PF11239.3 gi|154151141|ref|YP_001404759.1| - 6.3 6.9 12.0 14 5.7 8.3 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3040) Claudin_2 PF13903.1 gi|154151141|ref|YP_001404759.1| - 7.5 6.2 9.1 8.7 5.9 6.3 1.1 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction Neurensin PF14927.1 gi|154151141|ref|YP_001404759.1| - 9.9 5.5 15.9 0.24 10.7 4.4 2.0 1 1 1 2 2 2 0 Neurensin NHL PF01436.16 gi|154151143|ref|YP_001404761.1| - 2.1e-46 153.5 15.5 1.2e-07 31.2 0.0 6.5 6 0 0 6 6 6 6 NHL repeat SGL PF08450.7 gi|154151143|ref|YP_001404761.1| - 3.6e-16 59.2 7.9 9.5e-05 21.8 0.1 5.9 2 2 4 6 6 6 6 SMP-30/Gluconolaconase/LRE-like region PKD PF00801.15 gi|154151143|ref|YP_001404761.1| - 3.1e-08 33.2 8.3 3.1e-08 33.2 5.7 2.5 2 0 0 2 2 2 1 PKD domain Arylesterase PF01731.15 gi|154151143|ref|YP_001404761.1| - 5.2e-05 23.1 5.6 1.4 8.9 0.1 5.1 3 2 2 5 5 5 2 Arylesterase MRJP PF03022.11 gi|154151143|ref|YP_001404761.1| - 0.00049 19.3 10.0 1.1 8.3 0.2 5.5 5 2 2 7 7 7 3 Major royal jelly protein AIM24 PF01987.12 gi|154151143|ref|YP_001404761.1| - 0.0014 18.1 0.2 3.1 7.2 0.0 3.4 2 1 1 3 3 3 2 Mitochondrial biogenesis AIM24 SBBP PF06739.6 gi|154151143|ref|YP_001404761.1| - 0.092 12.5 0.3 0.092 12.5 0.2 6.7 7 0 0 7 7 7 0 Beta-propeller repeat ThiC-associated PF13667.1 gi|154151143|ref|YP_001404761.1| - 6.9 6.3 10.9 9.9 5.7 0.1 4.6 5 0 0 5 5 5 0 ThiC-associated domain Mrr_cat PF04471.7 gi|154151144|ref|YP_001404762.1| - 9.3e-09 35.0 0.2 1.7e-08 34.2 0.1 1.4 1 0 0 1 1 1 1 Restriction endonuclease DUF1626 PF07788.6 gi|154151144|ref|YP_001404762.1| - 0.0018 17.9 0.5 0.0061 16.3 0.4 1.9 1 0 0 1 1 1 1 Protein of unknown function (DUF1626) DEAD PF00270.24 gi|154151144|ref|YP_001404762.1| - 0.012 15.0 0.1 0.019 14.4 0.0 1.3 1 0 0 1 1 1 0 DEAD/DEAH box helicase AAA_2 PF07724.9 gi|154151146|ref|YP_001404764.1| - 6.7e-60 201.8 1.3 3.2e-57 193.1 0.2 3.0 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA PF00004.24 gi|154151146|ref|YP_001404764.1| - 6.3e-26 91.1 0.2 7e-14 52.1 0.0 3.0 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) ClpB_D2-small PF10431.4 gi|154151146|ref|YP_001404764.1| - 1.5e-23 82.4 0.9 6.8e-23 80.3 0.6 2.3 1 0 0 1 1 1 1 C-terminal, D2-small domain, of ClpB protein AAA_5 PF07728.9 gi|154151146|ref|YP_001404764.1| - 1.6e-22 79.7 0.1 7.9e-15 54.8 0.0 3.1 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) Clp_N PF02861.15 gi|154151146|ref|YP_001404764.1| - 1.6e-15 56.7 0.3 1.6e-08 34.3 0.1 2.9 2 0 0 2 2 2 2 Clp amino terminal domain AAA_16 PF13191.1 gi|154151146|ref|YP_001404764.1| - 6.5e-15 55.5 1.4 1.6e-05 25.0 0.0 4.9 3 2 2 5 5 5 2 AAA ATPase domain Sigma54_activat PF00158.21 gi|154151146|ref|YP_001404764.1| - 3.6e-12 46.0 0.2 4.6e-08 32.7 0.0 2.9 2 1 0 2 2 2 2 Sigma-54 interaction domain AAA_22 PF13401.1 gi|154151146|ref|YP_001404764.1| - 9.9e-10 38.6 6.3 0.0037 17.3 0.0 4.6 3 2 1 4 4 3 2 AAA domain IstB_IS21 PF01695.12 gi|154151146|ref|YP_001404764.1| - 1.6e-08 34.1 0.0 0.00056 19.3 0.0 2.8 2 0 0 2 2 2 2 IstB-like ATP binding protein Mg_chelatase PF01078.16 gi|154151146|ref|YP_001404764.1| - 8.3e-07 28.3 0.1 0.067 12.3 0.0 3.8 2 1 1 3 3 3 2 Magnesium chelatase, subunit ChlI AAA_17 PF13207.1 gi|154151146|ref|YP_001404764.1| - 2e-06 28.6 7.9 0.0017 19.2 0.0 4.1 2 2 0 2 2 2 1 AAA domain DNA_pol3_delta2 PF13177.1 gi|154151146|ref|YP_001404764.1| - 2e-05 24.2 0.0 0.0019 17.9 0.0 3.2 2 1 0 2 2 2 1 DNA polymerase III, delta subunit AAA_18 PF13238.1 gi|154151146|ref|YP_001404764.1| - 2.1e-05 24.8 9.4 0.032 14.5 0.0 4.4 4 1 1 5 5 3 2 AAA domain NACHT PF05729.7 gi|154151146|ref|YP_001404764.1| - 0.00017 21.3 0.1 0.15 11.6 0.0 3.4 3 0 0 3 3 3 1 NACHT domain AAA_19 PF13245.1 gi|154151146|ref|YP_001404764.1| - 0.00021 20.9 0.0 0.015 15.0 0.0 2.5 2 0 0 2 2 2 1 Part of AAA domain T2SE PF00437.15 gi|154151146|ref|YP_001404764.1| - 0.00023 20.1 0.1 0.011 14.6 0.1 2.7 2 1 0 2 2 2 1 Type II/IV secretion system protein AAA_3 PF07726.6 gi|154151146|ref|YP_001404764.1| - 0.00023 20.7 0.8 0.052 13.1 0.0 3.4 3 1 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) DnaB_C PF03796.10 gi|154151146|ref|YP_001404764.1| - 0.00042 19.2 0.6 0.018 13.9 0.0 2.8 3 0 0 3 3 3 1 DnaB-like helicase C terminal domain RNA_helicase PF00910.17 gi|154151146|ref|YP_001404764.1| - 0.00086 19.4 0.1 2.8 8.1 0.0 3.1 3 0 0 3 3 3 2 RNA helicase Arch_ATPase PF01637.13 gi|154151146|ref|YP_001404764.1| - 0.0033 17.1 21.6 0.017 14.8 0.1 5.6 3 2 4 7 7 7 2 Archaeal ATPase DUF258 PF03193.11 gi|154151146|ref|YP_001404764.1| - 0.0041 16.3 0.0 1.1 8.4 0.0 2.5 2 0 0 2 2 2 1 Protein of unknown function, DUF258 Torsin PF06309.6 gi|154151146|ref|YP_001404764.1| - 0.0044 16.9 0.0 0.032 14.1 0.0 2.2 2 0 0 2 2 2 1 Torsin AAA_10 PF12846.2 gi|154151146|ref|YP_001404764.1| - 0.0066 15.9 3.2 0.19 11.1 0.0 3.6 3 1 0 3 3 3 1 AAA-like domain AAA_28 PF13521.1 gi|154151146|ref|YP_001404764.1| - 0.0069 16.3 1.9 0.58 10.0 0.1 3.7 3 1 1 4 4 4 1 AAA domain AAA_25 PF13481.1 gi|154151146|ref|YP_001404764.1| - 0.0077 15.6 0.0 3.1 7.1 0.0 3.3 2 1 1 3 3 3 1 AAA domain AAA_24 PF13479.1 gi|154151146|ref|YP_001404764.1| - 0.013 15.1 0.0 0.89 9.0 0.0 2.4 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.22 gi|154151146|ref|YP_001404764.1| - 0.015 15.6 4.7 0.59 10.4 0.0 3.9 3 1 0 3 3 2 0 ABC transporter MobB PF03205.9 gi|154151146|ref|YP_001404764.1| - 0.029 14.0 0.0 1.4 8.6 0.0 2.9 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_33 PF13671.1 gi|154151146|ref|YP_001404764.1| - 0.034 14.0 0.2 3.9 7.3 0.0 3.2 3 1 0 3 3 2 0 AAA domain RGS PF00615.14 gi|154151146|ref|YP_001404764.1| - 0.087 12.9 0.1 0.087 12.9 0.1 2.4 2 1 0 2 2 2 0 Regulator of G protein signaling domain Apc5 PF12862.2 gi|154151146|ref|YP_001404764.1| - 0.13 12.1 0.1 28 4.6 0.0 2.9 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 5 EHN PF06441.7 gi|154151146|ref|YP_001404764.1| - 0.49 10.3 5.3 0.33 10.8 1.7 2.1 2 0 0 2 2 1 0 Epoxide hydrolase N terminus GrpE PF01025.14 gi|154151147|ref|YP_001404765.1| - 5.5e-41 139.8 0.6 6.1e-41 139.7 0.4 1.0 1 0 0 1 1 1 1 GrpE DUF1451 PF07295.6 gi|154151147|ref|YP_001404765.1| - 0.019 14.7 3.1 0.027 14.2 2.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1451) TAF8_C PF10406.4 gi|154151147|ref|YP_001404765.1| - 0.33 11.0 1.4 0.73 9.9 1.0 1.6 1 0 0 1 1 1 0 Transcription factor TFIID complex subunit 8 C-term DUF4404 PF14357.1 gi|154151147|ref|YP_001404765.1| - 0.47 10.9 3.9 0.91 9.9 2.7 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4404) HSP70 PF00012.15 gi|154151148|ref|YP_001404766.1| - 1.1e-217 723.7 12.3 8e-215 714.2 8.5 2.0 1 1 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.8 gi|154151148|ref|YP_001404766.1| - 1.1e-19 70.2 3.0 1.1e-19 70.2 2.1 2.4 2 1 0 2 2 2 1 MreB/Mbl protein FGGY_C PF02782.11 gi|154151148|ref|YP_001404766.1| - 0.00083 19.0 0.0 0.0025 17.4 0.0 1.8 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain StbA PF06406.6 gi|154151148|ref|YP_001404766.1| - 0.0017 17.4 0.1 0.019 13.9 0.0 2.3 1 1 0 2 2 2 1 StbA protein FtsA PF14450.1 gi|154151148|ref|YP_001404766.1| - 0.58 9.9 13.0 4 7.2 0.4 5.1 4 2 1 5 5 5 0 Cell division protein FtsA DUF3886 PF13025.1 gi|154151148|ref|YP_001404766.1| - 2.5 8.1 9.5 1.7 8.6 0.4 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3886) MRP-S31 PF15433.1 gi|154151148|ref|YP_001404766.1| - 5.4 6.3 8.8 9.9 5.4 6.1 1.4 1 0 0 1 1 1 0 Mitochondrial 28S ribosomal protein S31 CTDII PF01556.13 gi|154151149|ref|YP_001404767.1| - 4e-32 109.9 0.7 1.1e-20 73.2 0.0 3.3 3 0 0 3 3 3 3 DnaJ C terminal domain DnaJ PF00226.26 gi|154151149|ref|YP_001404767.1| - 1.7e-27 94.9 3.5 2.6e-27 94.3 2.4 1.3 1 0 0 1 1 1 1 DnaJ domain DnaJ_CXXCXGXG PF00684.14 gi|154151149|ref|YP_001404767.1| - 1.4e-12 47.4 16.3 2.3e-12 46.7 11.3 1.3 1 0 0 1 1 1 1 DnaJ central domain Cytochrom_CIII PF02085.11 gi|154151149|ref|YP_001404767.1| - 0.028 14.4 4.4 0.062 13.3 3.0 1.6 1 1 0 1 1 1 0 Class III cytochrome C family RRM_3 PF08777.6 gi|154151149|ref|YP_001404767.1| - 0.053 13.3 0.2 0.094 12.5 0.1 1.3 1 0 0 1 1 1 0 RNA binding motif Cytochrome_C7 PF14522.1 gi|154151149|ref|YP_001404767.1| - 0.29 10.7 10.6 10 5.8 7.4 2.4 1 1 0 1 1 1 0 Cytochrome c7 Ogr_Delta PF04606.7 gi|154151149|ref|YP_001404767.1| - 0.35 10.5 2.2 0.3 10.7 0.1 1.9 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger Cytochrom_c3_2 PF14537.1 gi|154151149|ref|YP_001404767.1| - 0.45 10.8 7.3 1.3 9.4 5.1 1.8 1 1 0 1 1 1 0 Cytochrome c3 HypA PF01155.14 gi|154151149|ref|YP_001404767.1| - 0.94 9.1 8.3 2.2 8.0 0.7 2.3 1 1 0 2 2 2 0 Hydrogenase expression/synthesis hypA family Lar_restr_allev PF14354.1 gi|154151149|ref|YP_001404767.1| - 4.6 7.6 10.2 2.8 8.2 3.9 2.6 1 1 2 3 3 3 0 Restriction alleviation protein Lar HSP20 PF00011.16 gi|154151150|ref|YP_001404768.1| - 6.2e-08 32.4 0.1 7.3e-08 32.1 0.1 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family CS PF04969.11 gi|154151150|ref|YP_001404768.1| - 0.0029 18.1 0.1 0.0076 16.7 0.1 1.6 1 1 0 1 1 1 1 CS domain Response_reg PF00072.19 gi|154151151|ref|YP_001404769.1| - 2.8e-23 82.0 0.1 5.6e-23 81.0 0.1 1.5 1 0 0 1 1 1 1 Response regulator receiver domain Latrotoxin_C PF15658.1 gi|154151151|ref|YP_001404769.1| - 0.098 12.4 0.0 0.2 11.4 0.0 1.4 1 0 0 1 1 1 0 Latrotoxin C-terminal domain Pribosyltran PF00156.22 gi|154151151|ref|YP_001404769.1| - 0.12 12.0 0.2 1.1 9.0 0.1 2.5 1 1 0 1 1 1 0 Phosphoribosyl transferase domain FBPase PF00316.15 gi|154151152|ref|YP_001404770.1| - 2.2e-73 246.9 0.0 2.5e-73 246.7 0.0 1.0 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase Inositol_P PF00459.20 gi|154151152|ref|YP_001404770.1| - 0.013 14.8 0.0 0.021 14.1 0.0 1.3 1 0 0 1 1 1 0 Inositol monophosphatase family F_bP_aldolase PF01116.15 gi|154151153|ref|YP_001404771.1| - 6.9e-24 84.4 0.7 8.7e-24 84.1 0.5 1.1 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-II Tagatose_6_P_K PF08013.6 gi|154151153|ref|YP_001404771.1| - 2.3e-10 39.5 0.8 3.4e-10 38.9 0.6 1.2 1 0 0 1 1 1 1 Tagatose 6 phosphate kinase FBPase_3 PF01950.11 gi|154151154|ref|YP_001404772.1| - 2e-175 583.1 0.0 2.3e-175 582.8 0.0 1.0 1 0 0 1 1 1 1 Fructose-1,6-bisphosphatase LSM PF01423.17 gi|154151155|ref|YP_001404773.1| - 1.2e-16 60.0 0.9 1.4e-16 59.7 0.6 1.1 1 0 0 1 1 1 1 LSM domain B-block_TFIIIC PF04182.7 gi|154151156|ref|YP_001404774.1| - 8.2e-09 35.1 0.0 1.2e-08 34.7 0.0 1.1 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC MarR_2 PF12802.2 gi|154151156|ref|YP_001404774.1| - 1.3e-05 24.8 0.0 2e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 MarR family MarR PF01047.17 gi|154151156|ref|YP_001404774.1| - 2e-05 24.2 0.0 3e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.1 gi|154151156|ref|YP_001404774.1| - 0.00018 20.7 0.0 0.00026 20.3 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.14 gi|154151156|ref|YP_001404774.1| - 0.00033 20.3 0.0 0.00042 19.9 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.2 gi|154151156|ref|YP_001404774.1| - 0.0029 17.3 0.0 0.0039 16.9 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_29 PF13551.1 gi|154151156|ref|YP_001404774.1| - 0.027 14.5 0.0 0.062 13.4 0.0 1.6 1 1 0 1 1 1 0 Winged helix-turn helix DUF2250 PF10007.4 gi|154151156|ref|YP_001404774.1| - 0.028 14.3 0.1 0.04 13.8 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) RPA_C PF08784.6 gi|154151156|ref|YP_001404774.1| - 0.11 12.8 0.0 0.18 12.1 0.0 1.2 1 0 0 1 1 1 0 Replication protein A C terminal HTH_Crp_2 PF13545.1 gi|154151156|ref|YP_001404774.1| - 0.14 12.0 0.0 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_27 PF13463.1 gi|154151156|ref|YP_001404774.1| - 0.14 12.4 0.0 0.19 12.0 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain Claudin_2 PF13903.1 gi|154151157|ref|YP_001404775.1| - 0.043 13.4 1.9 0.052 13.2 1.3 1.3 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction Lactamase_B_4 PF13691.1 gi|154151157|ref|YP_001404775.1| - 0.1 12.0 0.0 0.47 9.9 0.0 1.9 1 1 1 2 2 2 0 tRNase Z endonuclease Form-deh_trans PF09163.6 gi|154151157|ref|YP_001404775.1| - 0.4 10.1 0.1 0.4 10.1 0.0 2.4 3 0 0 3 3 3 0 Formate dehydrogenase N, transmembrane DisA_N PF02457.11 gi|154151158|ref|YP_001404776.1| - 2.1e-26 91.4 0.1 4.5e-26 90.3 0.1 1.6 1 0 0 1 1 1 1 DisA bacterial checkpoint controller nucleotide-binding PAS_9 PF13426.1 gi|154151158|ref|YP_001404776.1| - 5.8e-21 74.8 0.0 2.4e-09 37.4 0.0 3.3 3 0 0 3 3 3 2 PAS domain PAS PF00989.19 gi|154151158|ref|YP_001404776.1| - 8.8e-17 60.9 0.0 3.3e-11 42.9 0.0 2.6 2 0 0 2 2 2 2 PAS fold PAS_4 PF08448.5 gi|154151158|ref|YP_001404776.1| - 2.4e-10 40.4 0.0 4.9e-06 26.5 0.0 2.8 2 1 0 2 2 2 2 PAS fold Response_reg PF00072.19 gi|154151158|ref|YP_001404776.1| - 2.7e-08 33.8 0.0 1.2e-07 31.7 0.0 2.1 1 1 0 1 1 1 1 Response regulator receiver domain PAS_8 PF13188.1 gi|154151158|ref|YP_001404776.1| - 1.2e-06 28.1 0.0 0.0067 16.2 0.0 2.6 2 0 0 2 2 2 2 PAS domain PAS_3 PF08447.6 gi|154151158|ref|YP_001404776.1| - 0.053 13.6 0.1 0.27 11.3 0.0 2.3 2 0 0 2 2 2 0 PAS fold DUF2769 PF10967.3 gi|154151159|ref|YP_001404777.1| - 3.4e-16 59.2 15.4 5.4e-16 58.6 10.7 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2769) zf-Paramyx-P PF13008.2 gi|154151159|ref|YP_001404777.1| - 0.017 14.2 10.8 0.026 13.7 1.4 2.4 2 0 0 2 2 2 0 Zinc-binding domain of Paramyxoviridae V protein Cys_rich_CWC PF14375.1 gi|154151159|ref|YP_001404777.1| - 5.9 6.8 13.2 4.7 7.2 0.8 2.6 1 1 2 3 3 3 0 Cysteine-rich CWC SSP160 PF06933.6 gi|154151161|ref|YP_001404779.1| - 1.3 6.8 6.5 1.5 6.6 4.5 1.1 1 0 0 1 1 1 0 Special lobe-specific silk protein SSP160 ATP-grasp_5 PF13549.1 gi|154151162|ref|YP_001404780.1| - 1.3e-67 227.2 0.0 1.8e-67 226.7 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain Succ_CoA_lig PF13607.1 gi|154151162|ref|YP_001404780.1| - 1.5e-52 176.8 0.2 1.1e-51 174.1 0.1 2.4 3 0 0 3 3 3 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.1 gi|154151162|ref|YP_001404780.1| - 2.4e-27 95.3 0.1 7.8e-27 93.7 0.1 1.9 1 0 0 1 1 1 1 CoA binding domain CoA_binding PF02629.14 gi|154151162|ref|YP_001404780.1| - 2.7e-12 47.0 0.2 8.6e-12 45.4 0.2 2.0 1 0 0 1 1 1 1 CoA binding domain ATP-grasp_4 PF13535.1 gi|154151162|ref|YP_001404780.1| - 3.3e-05 23.6 0.0 6.1e-05 22.8 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_2 PF08442.5 gi|154151162|ref|YP_001404780.1| - 0.00011 21.7 0.3 0.00023 20.5 0.2 1.6 1 0 0 1 1 1 1 ATP-grasp domain RimK PF08443.6 gi|154151162|ref|YP_001404780.1| - 0.0031 17.0 0.0 0.006 16.0 0.0 1.5 1 0 0 1 1 1 1 RimK-like ATP-grasp domain ATP-grasp PF02222.17 gi|154151162|ref|YP_001404780.1| - 0.0051 16.1 0.0 0.0094 15.3 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.14 gi|154151162|ref|YP_001404780.1| - 0.012 15.1 0.3 0.027 14.0 0.2 1.5 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATPgrasp_Ter PF15632.1 gi|154151162|ref|YP_001404780.1| - 0.061 12.0 0.0 0.094 11.4 0.0 1.2 1 0 0 1 1 1 0 ATP-grasp in the biosynthetic pathway with Ter operon PAS_9 PF13426.1 gi|154151164|ref|YP_001404782.1| - 2.2e-28 98.6 0.0 1.5e-12 47.7 0.0 3.7 3 1 0 3 3 3 3 PAS domain PAS_3 PF08447.6 gi|154151164|ref|YP_001404782.1| - 3e-25 88.1 1.7 3.8e-11 42.9 0.1 4.2 4 0 0 4 4 4 2 PAS fold PAS_4 PF08448.5 gi|154151164|ref|YP_001404782.1| - 1.8e-22 79.4 0.4 8.1e-09 35.5 0.0 4.2 4 0 0 4 4 4 4 PAS fold PAS PF00989.19 gi|154151164|ref|YP_001404782.1| - 8.2e-21 73.9 0.1 1.6e-09 37.5 0.0 4.0 4 0 0 4 4 4 3 PAS fold PAS_8 PF13188.1 gi|154151164|ref|YP_001404782.1| - 7.4e-09 35.1 0.0 0.011 15.5 0.0 3.6 3 0 0 3 3 3 2 PAS domain PAS_10 PF13596.1 gi|154151164|ref|YP_001404782.1| - 0.00013 22.1 0.0 0.0044 17.2 0.0 3.2 3 0 0 3 3 3 1 PAS domain PAS_7 PF12860.2 gi|154151164|ref|YP_001404782.1| - 0.32 11.0 2.5 16 5.5 0.0 4.1 4 2 0 4 4 4 0 PAS fold HTH_24 PF13412.1 gi|154151165|ref|YP_001404783.1| - 0.00027 20.2 0.0 0.00044 19.5 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_DeoR PF08220.7 gi|154151165|ref|YP_001404783.1| - 0.0005 19.5 0.0 0.00077 18.9 0.0 1.2 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain TFIIE_alpha PF02002.12 gi|154151165|ref|YP_001404783.1| - 0.0069 15.8 0.0 0.0097 15.3 0.0 1.3 1 0 0 1 1 1 1 TFIIE alpha subunit MarR_2 PF12802.2 gi|154151165|ref|YP_001404783.1| - 0.0097 15.5 0.0 0.013 15.1 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.1 gi|154151165|ref|YP_001404783.1| - 0.011 16.0 0.0 0.015 15.6 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_12 PF08461.5 gi|154151165|ref|YP_001404783.1| - 0.046 13.4 0.4 0.079 12.7 0.2 1.5 1 1 0 1 1 1 0 Ribonuclease R winged-helix domain HTH_20 PF12840.2 gi|154151165|ref|YP_001404783.1| - 0.064 13.0 0.0 0.1 12.4 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain GCS2 PF04107.8 gi|154151166|ref|YP_001404784.1| - 1.7e-35 122.5 0.0 2.3e-35 122.1 0.0 1.1 1 0 0 1 1 1 1 Glutamate-cysteine ligase family 2(GCS2) GCS PF03074.11 gi|154151166|ref|YP_001404784.1| - 0.13 11.3 0.0 0.22 10.5 0.0 1.3 1 0 0 1 1 1 0 Glutamate-cysteine ligase CxxCxxCC PF03692.10 gi|154151167|ref|YP_001404785.1| - 1.6e-09 38.1 3.8 2.5e-09 37.4 2.6 1.4 1 0 0 1 1 1 1 Putative zinc- or iron-chelating domain RimK PF08443.6 gi|154151168|ref|YP_001404786.1| - 4.9e-12 45.7 0.0 1.5e-11 44.1 0.0 1.7 1 1 0 1 1 1 1 RimK-like ATP-grasp domain ATP-grasp_4 PF13535.1 gi|154151168|ref|YP_001404786.1| - 6.5e-10 39.0 0.0 1e-09 38.3 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.9 gi|154151168|ref|YP_001404786.1| - 9e-07 28.8 0.0 1.6e-06 28.0 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain DUF4343 PF14243.1 gi|154151168|ref|YP_001404786.1| - 3.4e-05 23.6 0.0 0.0002 21.2 0.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4343) Dala_Dala_lig_C PF07478.8 gi|154151168|ref|YP_001404786.1| - 0.00015 21.2 0.0 0.00021 20.7 0.0 1.2 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus ATPgrasp_Ter PF15632.1 gi|154151168|ref|YP_001404786.1| - 0.00035 19.4 0.1 0.017 13.8 0.0 2.1 2 0 0 2 2 2 1 ATP-grasp in the biosynthetic pathway with Ter operon TTL PF03133.10 gi|154151168|ref|YP_001404786.1| - 0.1 11.4 0.0 0.6 8.9 0.0 1.9 2 0 0 2 2 2 0 Tubulin-tyrosine ligase family RLAN PF14401.1 gi|154151169|ref|YP_001404787.1| - 4.6e-33 113.8 0.0 6e-33 113.5 0.0 1.1 1 0 0 1 1 1 1 RimK-like ATPgrasp N-terminal domain CxxCxxCC PF03692.10 gi|154151170|ref|YP_001404788.1| - 2.3e-07 31.1 1.2 3.5e-07 30.5 0.9 1.4 1 1 0 1 1 1 1 Putative zinc- or iron-chelating domain Crust_neurohorm PF01147.12 gi|154151170|ref|YP_001404788.1| - 0.036 13.3 0.0 2.7 7.3 0.0 2.5 2 0 0 2 2 2 0 Crustacean CHH/MIH/GIH neurohormone family FmdE PF02663.9 gi|154151170|ref|YP_001404788.1| - 0.13 12.1 0.0 0.28 11.0 0.0 1.5 1 1 1 2 2 2 0 FmdE, Molybdenum formylmethanofuran dehydrogenase operon DUF475 PF04332.10 gi|154151171|ref|YP_001404789.1| - 2.4e-47 161.9 12.6 3e-47 161.6 8.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF475) TerC PF03741.11 gi|154151171|ref|YP_001404789.1| - 7.6e-19 67.8 14.8 1.1e-10 41.3 4.0 2.4 1 1 1 2 2 2 2 Integral membrane protein TerC family DUF221 PF02714.10 gi|154151171|ref|YP_001404789.1| - 0.9 8.3 8.5 0.12 11.2 3.1 1.5 2 0 0 2 2 2 0 Domain of unknown function DUF221 Fer4 PF00037.22 gi|154151172|ref|YP_001404790.1| - 1.2e-07 31.0 18.0 1.9e-07 30.3 1.5 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_10 PF13237.1 gi|154151172|ref|YP_001404790.1| - 2.7e-06 27.0 11.9 4.9e-06 26.2 8.3 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|154151172|ref|YP_001404790.1| - 6.4e-06 26.5 6.9 0.00065 20.0 0.1 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.2 gi|154151172|ref|YP_001404790.1| - 1.6e-05 24.5 2.1 1.6e-05 24.5 1.5 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_2 PF12797.2 gi|154151172|ref|YP_001404790.1| - 3e-05 23.6 3.0 3e-05 23.6 2.1 2.6 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_7 PF12838.2 gi|154151172|ref|YP_001404790.1| - 4.1e-05 23.8 14.1 0.00012 22.3 9.7 1.9 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|154151172|ref|YP_001404790.1| - 5e-05 23.4 24.7 0.0015 18.7 1.4 2.3 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|154151172|ref|YP_001404790.1| - 9.4e-05 22.3 14.4 0.00048 20.0 9.6 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.1 gi|154151172|ref|YP_001404790.1| - 0.00014 22.1 9.2 0.072 13.4 1.3 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|154151172|ref|YP_001404790.1| - 0.00025 21.3 18.8 0.0069 16.8 3.9 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.2 gi|154151172|ref|YP_001404790.1| - 0.00045 20.3 16.4 0.00078 19.5 2.3 2.6 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_21 PF14697.1 gi|154151172|ref|YP_001404790.1| - 0.0032 17.2 14.0 0.0082 15.9 9.7 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|154151172|ref|YP_001404790.1| - 0.0064 17.2 15.2 0.053 14.2 10.5 2.2 1 1 0 1 1 1 1 4Fe-4S double cluster binding domain DUF1730 PF08331.5 gi|154151172|ref|YP_001404790.1| - 0.11 12.2 0.0 0.31 10.7 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1730) Dehalogenase PF13486.1 gi|154151172|ref|YP_001404790.1| - 0.14 11.5 0.0 0.21 10.9 0.0 1.2 1 0 0 1 1 1 0 Reductive dehalogenase subunit Fer4_15 PF13459.1 gi|154151172|ref|YP_001404790.1| - 1.4 9.5 10.6 19 5.9 7.5 2.3 1 1 1 2 2 2 0 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|154151172|ref|YP_001404790.1| - 1.5 9.2 7.0 0.51 10.7 1.1 2.4 2 0 0 2 2 2 0 4Fe-4S single cluster domain UPF0047 PF01894.12 gi|154151173|ref|YP_001404791.1| - 4.7e-36 123.1 0.0 5.4e-36 122.9 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 DUF1628 PF07790.6 gi|154151174|ref|YP_001404792.1| - 0.00023 21.8 1.1 0.001 19.7 0.5 2.1 1 1 1 2 2 2 1 Protein of unknown function (DUF1628) DNA_topoisoIV PF00521.15 gi|154151175|ref|YP_001404793.1| - 7.9e-150 499.4 0.0 1.1e-149 498.9 0.0 1.1 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A DNA_gyraseA_C PF03989.8 gi|154151175|ref|YP_001404793.1| - 5.6e-66 217.6 15.1 7.9e-14 50.6 1.5 6.5 6 0 0 6 6 6 6 DNA gyrase C-terminal domain, beta-propeller DNA_gyraseB PF00204.20 gi|154151176|ref|YP_001404794.1| - 1.2e-58 197.1 0.1 2e-58 196.4 0.1 1.4 1 0 0 1 1 1 1 DNA gyrase B DNA_gyraseB_C PF00986.16 gi|154151176|ref|YP_001404794.1| - 3.2e-30 103.6 0.3 6.9e-30 102.6 0.2 1.6 1 0 0 1 1 1 1 DNA gyrase B subunit, carboxyl terminus Toprim PF01751.17 gi|154151176|ref|YP_001404794.1| - 1.5e-27 95.4 0.0 4.2e-27 94.0 0.0 1.8 1 0 0 1 1 1 1 Toprim domain HATPase_c PF02518.21 gi|154151176|ref|YP_001404794.1| - 2.6e-15 56.0 0.1 6.4e-15 54.8 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.1 gi|154151176|ref|YP_001404794.1| - 9.8e-05 22.0 0.0 0.0002 20.9 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF3349 PF11829.3 gi|154151176|ref|YP_001404794.1| - 0.013 15.9 0.1 0.4 11.1 0.0 3.1 4 0 0 4 4 4 0 Protein of unknown function (DUF3349) bPH_6 PF10756.4 gi|154151176|ref|YP_001404794.1| - 0.093 12.6 0.0 0.23 11.3 0.0 1.6 1 0 0 1 1 1 0 Bacterial PH domain PAS_9 PF13426.1 gi|154151177|ref|YP_001404795.1| - 5.8e-06 26.6 0.1 1.3e-05 25.4 0.1 1.6 1 0 0 1 1 1 1 PAS domain PAS PF00989.19 gi|154151177|ref|YP_001404795.1| - 6.4e-06 25.9 0.1 1.7e-05 24.5 0.1 1.7 2 0 0 2 2 2 1 PAS fold PAS_8 PF13188.1 gi|154151177|ref|YP_001404795.1| - 5.5e-05 22.8 0.0 0.00013 21.7 0.0 1.6 1 0 0 1 1 1 1 PAS domain HATPase_c PF02518.21 gi|154151177|ref|YP_001404795.1| - 0.11 12.2 0.0 0.21 11.2 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GATase_6 PF13522.1 gi|154151177|ref|YP_001404795.1| - 0.13 12.1 0.0 0.28 11.1 0.0 1.5 1 0 0 1 1 1 0 Glutamine amidotransferase domain Fe-ADH PF00465.14 gi|154151178|ref|YP_001404796.1| - 6.2e-114 380.4 0.1 7e-114 380.2 0.0 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.1 gi|154151178|ref|YP_001404796.1| - 8.5e-21 74.3 0.1 7.2e-11 41.8 0.0 2.3 2 0 0 2 2 2 2 Iron-containing alcohol dehydrogenase Peptidase_A6 PF01829.11 gi|154151178|ref|YP_001404796.1| - 0.12 11.3 0.0 0.19 10.7 0.0 1.2 1 0 0 1 1 1 0 Peptidase A6 family CbiM PF01891.11 gi|154151179|ref|YP_001404797.1| - 2.1e-58 197.3 16.6 2.3e-58 197.1 11.5 1.0 1 0 0 1 1 1 1 Cobalt uptake substrate-specific transmembrane region DUF3816 PF12822.2 gi|154151179|ref|YP_001404797.1| - 0.7 9.7 27.5 0.52 10.1 16.2 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3816) PDGLE PF13190.1 gi|154151180|ref|YP_001404798.1| - 2.1e-10 40.1 0.9 2.8e-10 39.7 0.6 1.1 1 0 0 1 1 1 1 PDGLE domain ABC_tran PF00005.22 gi|154151181|ref|YP_001404799.1| - 6.4e-32 110.7 0.0 1e-31 110.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|154151181|ref|YP_001404799.1| - 3.4e-18 66.6 1.0 6.9e-16 59.0 0.7 2.1 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.1 gi|154151181|ref|YP_001404799.1| - 3.1e-09 36.3 0.0 0.00018 20.7 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain SMC_N PF02463.14 gi|154151181|ref|YP_001404799.1| - 4.8e-08 32.4 0.0 6.4e-07 28.8 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.1 gi|154151181|ref|YP_001404799.1| - 1.2e-06 29.0 0.0 1.6e-06 28.6 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|154151181|ref|YP_001404799.1| - 1.8e-06 27.3 0.1 3.7e-06 26.3 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_28 PF13521.1 gi|154151181|ref|YP_001404799.1| - 0.0027 17.7 0.0 0.005 16.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|154151181|ref|YP_001404799.1| - 0.0081 16.1 0.1 0.03 14.2 0.0 2.0 1 1 0 1 1 1 1 AAA ATPase domain AAA_13 PF13166.1 gi|154151181|ref|YP_001404799.1| - 0.0095 14.4 0.1 0.081 11.3 0.0 2.0 2 0 0 2 2 2 1 AAA domain FtsK_SpoIIIE PF01580.13 gi|154151181|ref|YP_001404799.1| - 0.013 15.0 0.0 0.032 13.7 0.0 1.6 2 0 0 2 2 2 0 FtsK/SpoIIIE family SbcCD_C PF13558.1 gi|154151181|ref|YP_001404799.1| - 0.033 14.0 0.0 0.27 11.1 0.0 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_10 PF12846.2 gi|154151181|ref|YP_001404799.1| - 0.061 12.7 0.5 0.29 10.5 0.1 1.9 1 1 1 2 2 2 0 AAA-like domain DUF258 PF03193.11 gi|154151181|ref|YP_001404799.1| - 0.093 11.9 0.0 0.15 11.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF258 AAA_18 PF13238.1 gi|154151181|ref|YP_001404799.1| - 0.14 12.5 0.1 0.72 10.1 0.0 2.2 2 1 0 2 2 2 0 AAA domain Miro PF08477.8 gi|154151181|ref|YP_001404799.1| - 0.14 12.7 0.0 0.25 11.8 0.0 1.5 1 0 0 1 1 1 0 Miro-like protein AAA_14 PF13173.1 gi|154151181|ref|YP_001404799.1| - 0.14 12.0 0.0 1 9.2 0.0 2.3 1 1 0 1 1 1 0 AAA domain NACHT PF05729.7 gi|154151181|ref|YP_001404799.1| - 0.14 11.7 0.1 0.75 9.4 0.0 2.0 2 0 0 2 2 2 0 NACHT domain CbiQ PF02361.11 gi|154151182|ref|YP_001404800.1| - 8.5e-28 97.4 12.2 8.5e-28 97.4 8.4 1.5 1 1 1 2 2 2 1 Cobalt transport protein TOBE PF03459.12 gi|154151183|ref|YP_001404801.1| - 1.2e-21 76.5 0.2 1.4e-21 76.3 0.1 1.0 1 0 0 1 1 1 1 TOBE domain NikR_C PF08753.6 gi|154151185|ref|YP_001404803.1| - 5.9e-28 96.5 4.5 7.9e-28 96.1 3.1 1.2 1 0 0 1 1 1 1 NikR C terminal nickel binding domain RHH_1 PF01402.16 gi|154151185|ref|YP_001404803.1| - 4.2e-09 35.9 0.0 9.4e-09 34.8 0.0 1.6 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family PPV_E2_C PF00511.12 gi|154151185|ref|YP_001404803.1| - 0.054 13.4 0.0 8.8 6.3 0.0 2.2 2 0 0 2 2 2 0 E2 (early) protein, C terminal Methyltransf_21 PF05050.7 gi|154151186|ref|YP_001404804.1| - 1.4e-08 34.8 0.0 2.6e-08 33.9 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase FkbM domain Methyltransf_18 PF12847.2 gi|154151186|ref|YP_001404804.1| - 0.00017 22.1 0.1 0.00038 21.0 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.11 gi|154151186|ref|YP_001404804.1| - 0.00057 19.5 0.0 0.00082 19.0 0.0 1.1 1 0 0 1 1 1 1 Met-10+ like-protein V_cholerae_RfbT PF05575.6 gi|154151186|ref|YP_001404804.1| - 0.012 14.6 0.0 0.019 14.0 0.0 1.4 1 0 0 1 1 1 0 Vibrio cholerae RfbT protein NAD_binding_2 PF03446.10 gi|154151187|ref|YP_001404805.1| - 1.1e-33 116.4 0.0 1.5e-33 115.9 0.0 1.2 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.1 gi|154151187|ref|YP_001404805.1| - 1.3e-25 89.7 0.1 2e-25 89.2 0.0 1.2 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 2-Hacid_dh_C PF02826.14 gi|154151187|ref|YP_001404805.1| - 1.3e-07 30.9 0.0 2.2e-07 30.1 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.12 gi|154151187|ref|YP_001404805.1| - 8.6e-06 26.0 0.0 1.9e-05 24.9 0.0 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Shikimate_DH PF01488.15 gi|154151187|ref|YP_001404805.1| - 0.0017 18.4 0.0 0.0034 17.4 0.0 1.6 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase NAD_Gly3P_dh_N PF01210.18 gi|154151187|ref|YP_001404805.1| - 0.0033 17.1 0.0 0.02 14.6 0.0 2.0 2 0 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3HCDH_N PF02737.13 gi|154151187|ref|YP_001404805.1| - 0.0033 17.0 0.0 0.0055 16.3 0.0 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IlvN PF07991.7 gi|154151187|ref|YP_001404805.1| - 0.019 14.3 0.0 0.039 13.3 0.0 1.4 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, catalytic domain adh_short PF00106.20 gi|154151187|ref|YP_001404805.1| - 0.036 13.9 0.0 0.068 13.0 0.0 1.3 1 0 0 1 1 1 0 short chain dehydrogenase NAD_binding_10 PF13460.1 gi|154151187|ref|YP_001404805.1| - 0.054 13.5 0.0 0.13 12.2 0.0 1.6 1 0 0 1 1 1 0 NADH(P)-binding UDPG_MGDP_dh_N PF03721.9 gi|154151187|ref|YP_001404805.1| - 0.15 11.3 0.0 0.4 10.0 0.0 1.7 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MacB_PCD PF12704.2 gi|154151188|ref|YP_001404806.1| - 2.9e-27 95.7 7.0 2.9e-27 95.7 4.9 3.0 2 1 2 4 4 4 2 MacB-like periplasmic core domain FtsX PF02687.16 gi|154151188|ref|YP_001404806.1| - 3.3e-20 72.0 13.9 3.3e-20 72.0 9.6 2.3 2 0 0 2 2 2 1 FtsX-like permease family DUF4134 PF13572.1 gi|154151188|ref|YP_001404806.1| - 3.6 7.7 12.4 0.2 11.7 0.8 3.1 2 1 1 3 3 3 0 Domain of unknown function (DUF4134) ABC_tran PF00005.22 gi|154151189|ref|YP_001404807.1| - 3.9e-31 108.1 0.0 5.1e-31 107.7 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|154151189|ref|YP_001404807.1| - 1.2e-08 35.3 0.0 1.2e-06 28.7 0.0 2.2 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|154151189|ref|YP_001404807.1| - 6.3e-08 32.1 0.0 0.0061 15.8 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 gi|154151189|ref|YP_001404807.1| - 1.6e-05 24.3 0.0 3e-05 23.4 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.1 gi|154151189|ref|YP_001404807.1| - 1.8e-05 23.9 0.0 0.0042 16.1 0.0 2.1 1 1 0 2 2 2 2 AAA ATPase domain AAA_10 PF12846.2 gi|154151189|ref|YP_001404807.1| - 2.9e-05 23.6 0.4 0.0083 15.5 0.3 2.1 1 1 0 2 2 2 2 AAA-like domain DUF258 PF03193.11 gi|154151189|ref|YP_001404807.1| - 0.00028 20.1 0.0 0.00046 19.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_22 PF13401.1 gi|154151189|ref|YP_001404807.1| - 0.00044 20.3 0.0 0.021 14.9 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|154151189|ref|YP_001404807.1| - 0.00098 19.9 0.0 0.0025 18.6 0.0 1.6 1 1 0 1 1 1 1 AAA domain FtsK_SpoIIIE PF01580.13 gi|154151189|ref|YP_001404807.1| - 0.0015 18.0 0.0 0.0029 17.0 0.0 1.5 1 0 0 1 1 1 1 FtsK/SpoIIIE family AAA_23 PF13476.1 gi|154151189|ref|YP_001404807.1| - 0.0042 17.4 0.0 0.0095 16.2 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.1 gi|154151189|ref|YP_001404807.1| - 0.0053 16.3 0.0 0.037 13.5 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.1 gi|154151189|ref|YP_001404807.1| - 0.0057 16.0 0.0 0.014 14.7 0.0 1.6 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.1 gi|154151189|ref|YP_001404807.1| - 0.0059 16.6 0.0 0.0069 16.3 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_18 PF13238.1 gi|154151189|ref|YP_001404807.1| - 0.0061 16.8 0.0 0.078 13.2 0.0 2.1 2 0 0 2 2 2 1 AAA domain MMR_HSR1 PF01926.18 gi|154151189|ref|YP_001404807.1| - 0.008 16.1 0.1 0.014 15.3 0.1 1.7 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_28 PF13521.1 gi|154151189|ref|YP_001404807.1| - 0.0093 15.9 0.0 0.072 13.0 0.0 2.1 2 0 0 2 2 2 1 AAA domain Arch_ATPase PF01637.13 gi|154151189|ref|YP_001404807.1| - 0.02 14.5 0.0 0.14 11.8 0.0 2.1 1 1 0 1 1 1 0 Archaeal ATPase MutS_V PF00488.16 gi|154151189|ref|YP_001404807.1| - 0.02 14.2 0.0 0.038 13.3 0.0 1.4 1 0 0 1 1 1 0 MutS domain V G-alpha PF00503.15 gi|154151189|ref|YP_001404807.1| - 0.023 13.4 0.0 0.023 13.3 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit AAA_14 PF13173.1 gi|154151189|ref|YP_001404807.1| - 0.03 14.2 0.0 0.071 13.0 0.0 1.7 2 0 0 2 2 1 0 AAA domain AAA_33 PF13671.1 gi|154151189|ref|YP_001404807.1| - 0.041 13.7 0.0 0.095 12.5 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_19 PF13245.1 gi|154151189|ref|YP_001404807.1| - 0.045 13.5 0.1 5.7 6.7 0.0 3.0 4 0 0 4 4 3 0 Part of AAA domain RNA_helicase PF00910.17 gi|154151189|ref|YP_001404807.1| - 0.049 13.8 0.0 0.1 12.7 0.0 1.6 1 0 0 1 1 1 0 RNA helicase AAA_24 PF13479.1 gi|154151189|ref|YP_001404807.1| - 0.051 13.1 0.2 0.78 9.2 0.0 2.4 2 1 1 3 3 3 0 AAA domain KaiC PF06745.8 gi|154151189|ref|YP_001404807.1| - 0.063 12.3 0.0 0.17 10.9 0.0 1.7 2 0 0 2 2 2 0 KaiC NB-ARC PF00931.17 gi|154151189|ref|YP_001404807.1| - 0.07 11.9 0.1 0.14 10.9 0.0 1.5 2 0 0 2 2 2 0 NB-ARC domain RNA12 PF10443.4 gi|154151189|ref|YP_001404807.1| - 0.086 11.3 0.0 0.14 10.6 0.0 1.3 1 0 0 1 1 1 0 RNA12 protein Rad17 PF03215.10 gi|154151189|ref|YP_001404807.1| - 0.13 10.8 0.0 0.15 10.6 0.0 1.1 1 0 0 1 1 1 0 Rad17 cell cycle checkpoint protein CARDB PF07705.6 gi|154151190|ref|YP_001404808.1| - 0.00023 21.1 14.0 0.0012 18.8 0.1 4.3 1 1 1 4 4 4 2 CARDB DUF11 PF01345.13 gi|154151190|ref|YP_001404808.1| - 0.0018 18.2 3.3 0.0018 18.2 2.3 6.0 5 2 0 5 5 5 1 Domain of unknown function DUF11 DUF756 PF05506.7 gi|154151190|ref|YP_001404808.1| - 0.16 12.5 0.8 1.7 9.1 0.0 3.0 3 2 0 3 3 3 0 Domain of unknown function (DUF756) DUF1517 PF07466.6 gi|154151190|ref|YP_001404808.1| - 3.1 6.7 11.7 0.29 10.0 3.7 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1517) DUF2393 PF09624.5 gi|154151190|ref|YP_001404808.1| - 4 6.9 11.1 1.1 8.7 0.0 3.6 4 1 1 5 5 5 0 Protein of unknown function (DUF2393) HTH_3 PF01381.17 gi|154151191|ref|YP_001404809.1| - 4.4e-15 55.2 0.0 5e-15 55.0 0.0 1.0 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.2 gi|154151191|ref|YP_001404809.1| - 3.3e-14 52.6 0.0 3.6e-14 52.5 0.0 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.1 gi|154151191|ref|YP_001404809.1| - 9.2e-08 32.1 0.0 1.1e-07 31.9 0.0 1.0 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.1 gi|154151191|ref|YP_001404809.1| - 3.4e-05 23.9 0.0 3.9e-05 23.7 0.0 1.1 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_Crp_2 PF13545.1 gi|154151191|ref|YP_001404809.1| - 0.00053 19.7 0.0 0.00079 19.1 0.0 1.3 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_25 PF13413.1 gi|154151191|ref|YP_001404809.1| - 0.033 13.8 0.0 0.045 13.3 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain Sigma70_r4 PF04545.11 gi|154151191|ref|YP_001404809.1| - 0.033 13.4 0.0 0.055 12.7 0.0 1.3 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_11 PF08279.7 gi|154151191|ref|YP_001404809.1| - 0.044 13.4 0.0 0.071 12.7 0.0 1.4 1 0 0 1 1 1 0 HTH domain DUF2178 PF09946.4 gi|154151192|ref|YP_001404810.1| - 1.2e-17 63.6 0.8 1.2e-17 63.6 0.6 1.5 2 0 0 2 2 2 1 Predicted membrane protein (DUF2178) DUF1673 PF07895.6 gi|154151192|ref|YP_001404810.1| - 0.025 14.0 6.0 0.038 13.5 4.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1673) 7TM-7TMR_HD PF07698.6 gi|154151192|ref|YP_001404810.1| - 0.027 13.9 2.2 0.027 13.9 1.5 2.5 3 0 0 3 3 3 0 7TM receptor with intracellular HD hydrolase MNHE PF01899.11 gi|154151192|ref|YP_001404810.1| - 0.22 11.1 3.7 0.14 11.7 1.3 1.6 1 1 1 2 2 2 0 Na+/H+ ion antiporter subunit FtsX PF02687.16 gi|154151192|ref|YP_001404810.1| - 0.65 9.7 7.2 0.2 11.4 0.5 2.5 1 1 1 2 2 2 0 FtsX-like permease family TerC PF03741.11 gi|154151192|ref|YP_001404810.1| - 0.67 9.3 6.8 0.038 13.4 1.2 1.4 2 0 0 2 2 2 0 Integral membrane protein TerC family Polysacc_synt_3 PF13440.1 gi|154151192|ref|YP_001404810.1| - 0.82 9.0 12.5 0.18 11.2 4.0 2.1 1 1 1 2 2 2 0 Polysaccharide biosynthesis protein Peptidase_M50B PF13398.1 gi|154151192|ref|YP_001404810.1| - 3 7.1 11.5 0.16 11.3 4.1 1.7 2 1 0 2 2 2 0 Peptidase M50B-like Colicin_V PF02674.11 gi|154151192|ref|YP_001404810.1| - 4.1 7.2 11.1 47 3.7 7.7 2.5 1 1 0 1 1 1 0 Colicin V production protein PRA1 PF03208.14 gi|154151192|ref|YP_001404810.1| - 5.1 6.4 9.9 0.55 9.5 3.2 1.8 2 0 0 2 2 2 0 PRA1 family protein DUF350 PF03994.9 gi|154151192|ref|YP_001404810.1| - 5.3 6.8 12.9 1.4 8.7 0.5 3.3 3 0 0 3 3 3 0 Domain of Unknown Function (DUF350) DUF3816 PF12822.2 gi|154151193|ref|YP_001404811.1| - 0.0065 16.3 3.1 0.0084 16.0 2.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3816) DUF1282 PF06930.7 gi|154151193|ref|YP_001404811.1| - 0.0079 15.8 1.3 0.009 15.6 0.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1282) DUF3169 PF11368.3 gi|154151193|ref|YP_001404811.1| - 0.15 11.2 3.4 0.19 10.9 2.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3169) Syndecan PF01034.15 gi|154151193|ref|YP_001404811.1| - 3.5 7.3 5.3 1 9.0 1.2 1.8 2 0 0 2 2 2 0 Syndecan domain SpoIIE PF07228.7 gi|154151194|ref|YP_001404812.1| - 2.6e-47 161.0 0.0 4.6e-47 160.2 0.0 1.4 1 0 0 1 1 1 1 Stage II sporulation protein E (SpoIIE) HAMP PF00672.20 gi|154151194|ref|YP_001404812.1| - 7.7e-16 58.0 1.3 2.9e-15 56.1 0.9 2.1 1 0 0 1 1 1 1 HAMP domain Cache_1 PF02743.13 gi|154151194|ref|YP_001404812.1| - 5.5e-09 35.4 0.0 1.3e-08 34.2 0.0 1.7 1 0 0 1 1 1 1 Cache domain VIT1 PF01988.14 gi|154151195|ref|YP_001404813.1| - 5.8e-23 81.4 28.3 3.5e-13 49.5 3.6 2.7 2 1 1 3 3 3 2 VIT family Rubrerythrin PF02915.12 gi|154151195|ref|YP_001404813.1| - 0.14 12.5 0.3 1.8 8.8 0.1 2.2 2 0 0 2 2 2 0 Rubrerythrin Oxidored_q3 PF00499.15 gi|154151195|ref|YP_001404813.1| - 4.5 7.0 14.5 0.37 10.5 6.8 1.6 2 0 0 2 2 2 0 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 OrfB_Zn_ribbon PF07282.6 gi|154151198|ref|YP_001404816.1| - 1.9e-27 94.7 0.1 4.9e-27 93.3 0.1 1.7 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Toprim_Crpt PF13342.1 gi|154151198|ref|YP_001404816.1| - 0.004 16.7 1.1 0.004 16.7 0.8 1.9 1 1 1 2 2 2 1 C-terminal repeat of topoisomerase HypA PF01155.14 gi|154151198|ref|YP_001404816.1| - 0.0079 15.8 0.2 0.02 14.5 0.1 1.7 2 0 0 2 2 2 1 Hydrogenase expression/synthesis hypA family DZR PF12773.2 gi|154151198|ref|YP_001404816.1| - 0.011 15.5 0.9 0.019 14.7 0.6 1.4 1 0 0 1 1 1 0 Double zinc ribbon zf-Mss51 PF13824.1 gi|154151198|ref|YP_001404816.1| - 0.023 14.5 2.4 0.086 12.7 1.7 2.0 1 1 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 NRDD PF13597.1 gi|154151198|ref|YP_001404816.1| - 0.034 12.2 0.0 0.043 11.9 0.0 1.3 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase UPF0547 PF10571.4 gi|154151198|ref|YP_001404816.1| - 0.13 11.9 5.8 2.3 7.9 1.8 2.4 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 C1_3 PF07649.7 gi|154151198|ref|YP_001404816.1| - 0.15 12.1 0.6 0.25 11.4 0.4 1.4 1 0 0 1 1 1 0 C1-like domain zf-ribbon_3 PF13248.1 gi|154151198|ref|YP_001404816.1| - 0.18 11.0 3.0 1.6 8.0 0.2 2.4 2 0 0 2 2 2 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.2 gi|154151198|ref|YP_001404816.1| - 0.68 9.7 6.4 0.52 10.1 0.5 2.1 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Nudix_N_2 PF14803.1 gi|154151198|ref|YP_001404816.1| - 0.74 9.5 4.5 12 5.6 3.1 2.6 1 1 0 1 1 1 0 Nudix N-terminal zf-CCHC_4 PF14392.1 gi|154151198|ref|YP_001404816.1| - 0.81 9.4 3.6 11 5.7 0.2 2.6 2 0 0 2 2 2 0 Zinc knuckle zinc_ribbon_2 PF13240.1 gi|154151198|ref|YP_001404816.1| - 1 8.9 6.0 9.9 5.7 1.2 2.5 2 0 0 2 2 2 0 zinc-ribbon domain DUF2070 PF09843.4 gi|154151199|ref|YP_001404817.1| - 7.9e-52 175.3 0.9 1.2e-51 174.7 0.6 1.3 1 0 0 1 1 1 1 Predicted membrane protein (DUF2070) PfkB PF00294.19 gi|154151200|ref|YP_001404818.1| - 5.8e-46 156.9 0.0 8.1e-46 156.5 0.0 1.2 1 0 0 1 1 1 1 pfkB family carbohydrate kinase MMR_HSR1_C PF08438.5 gi|154151200|ref|YP_001404818.1| - 0.096 12.9 0.0 0.16 12.2 0.0 1.3 1 0 0 1 1 1 0 GTPase of unknown function C-terminal DUF555 PF04475.7 gi|154151201|ref|YP_001404819.1| - 8.8e-47 157.3 0.1 9.9e-47 157.1 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF555) RE_TaqI PF09573.5 gi|154151201|ref|YP_001404819.1| - 0.11 11.6 0.0 0.15 11.2 0.0 1.3 1 0 0 1 1 1 0 TaqI restriction endonuclease ArgJ PF01960.13 gi|154151201|ref|YP_001404819.1| - 0.11 10.8 0.1 0.11 10.8 0.1 1.1 1 0 0 1 1 1 0 ArgJ family Nitroreductase PF00881.19 gi|154151202|ref|YP_001404820.1| - 3.7e-34 117.9 0.0 4.5e-34 117.6 0.0 1.1 1 0 0 1 1 1 1 Nitroreductase family Xlink PF00193.12 gi|154151202|ref|YP_001404820.1| - 0.059 13.4 0.0 0.11 12.6 0.0 1.4 1 0 0 1 1 1 0 Extracellular link domain YfdX PF10938.3 gi|154151203|ref|YP_001404821.1| - 0.061 12.9 0.2 0.08 12.5 0.1 1.3 1 0 0 1 1 1 0 YfdX protein Methyltransf_11 PF08241.7 gi|154151205|ref|YP_001404823.1| - 1.6e-25 89.3 0.0 2.9e-25 88.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|154151205|ref|YP_001404823.1| - 4.8e-19 68.6 0.0 6.8e-19 68.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|154151205|ref|YP_001404823.1| - 4.5e-16 58.7 0.0 7e-16 58.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|154151205|ref|YP_001404823.1| - 7.6e-16 57.9 0.0 5.9e-15 55.0 0.0 1.9 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.7 gi|154151205|ref|YP_001404823.1| - 3.1e-15 56.4 0.0 9.3e-15 54.9 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|154151205|ref|YP_001404823.1| - 3.4e-12 46.9 0.0 5.9e-12 46.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|154151205|ref|YP_001404823.1| - 2.4e-10 40.6 0.0 2.2e-09 37.5 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|154151205|ref|YP_001404823.1| - 8.2e-08 32.2 0.1 2e-07 31.0 0.0 1.6 1 1 1 2 2 2 1 Methyltransferase domain CMAS PF02353.15 gi|154151205|ref|YP_001404823.1| - 1.1e-07 31.2 0.0 3.1e-06 26.4 0.0 2.2 1 1 1 2 2 2 1 Mycolic acid cyclopropane synthetase MetW PF07021.7 gi|154151205|ref|YP_001404823.1| - 1e-05 25.0 0.0 1.6e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW NodS PF05401.6 gi|154151205|ref|YP_001404823.1| - 0.0032 16.8 0.0 0.0046 16.3 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_9 PF08003.6 gi|154151205|ref|YP_001404823.1| - 0.0064 15.2 0.0 0.01 14.5 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) PCMT PF01135.14 gi|154151205|ref|YP_001404823.1| - 0.0097 15.4 0.0 0.014 14.9 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_8 PF05148.10 gi|154151205|ref|YP_001404823.1| - 0.013 15.1 0.0 0.026 14.1 0.0 1.5 1 1 0 1 1 1 0 Hypothetical methyltransferase Pox_MCEL PF03291.11 gi|154151205|ref|YP_001404823.1| - 0.041 12.7 0.0 0.13 11.1 0.0 1.7 2 0 0 2 2 2 0 mRNA capping enzyme MTS PF05175.9 gi|154151205|ref|YP_001404823.1| - 0.044 13.1 0.0 0.17 11.2 0.0 1.9 2 0 0 2 2 2 0 Methyltransferase small domain Methyltransf_29 PF03141.11 gi|154151205|ref|YP_001404823.1| - 0.061 11.6 0.1 0.085 11.1 0.0 1.1 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase AdoMet_MTase PF07757.8 gi|154151205|ref|YP_001404823.1| - 0.1 12.7 0.0 0.21 11.7 0.0 1.5 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase DREV PF05219.7 gi|154151205|ref|YP_001404823.1| - 0.13 11.1 0.0 0.17 10.7 0.0 1.3 1 0 0 1 1 1 0 DREV methyltransferase DNA_pol3_delta2 PF13177.1 gi|154151206|ref|YP_001404824.1| - 5.3e-08 32.6 0.0 7.8e-08 32.1 0.0 1.3 1 0 0 1 1 1 1 DNA polymerase III, delta subunit Rad17 PF03215.10 gi|154151206|ref|YP_001404824.1| - 7.2e-07 28.2 0.0 0.0066 15.1 0.0 2.1 1 1 0 2 2 2 2 Rad17 cell cycle checkpoint protein AAA PF00004.24 gi|154151206|ref|YP_001404824.1| - 1.6e-06 28.3 0.0 6.7e-06 26.3 0.0 2.0 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Sigma54_activ_2 PF14532.1 gi|154151206|ref|YP_001404824.1| - 3.2e-05 23.9 0.0 0.0016 18.4 0.0 2.4 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_22 PF13401.1 gi|154151206|ref|YP_001404824.1| - 5e-05 23.4 0.0 0.00015 21.9 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|154151206|ref|YP_001404824.1| - 0.00018 21.5 0.7 0.0018 18.3 0.0 2.5 1 1 1 3 3 3 1 AAA ATPase domain AAA_19 PF13245.1 gi|154151206|ref|YP_001404824.1| - 0.0002 21.0 0.3 0.0087 15.7 0.0 3.0 2 1 0 2 2 2 1 Part of AAA domain RuvB_N PF05496.7 gi|154151206|ref|YP_001404824.1| - 0.0012 17.9 0.0 0.0044 16.1 0.0 1.8 2 0 0 2 2 2 1 Holliday junction DNA helicase ruvB N-terminus DUF815 PF05673.8 gi|154151206|ref|YP_001404824.1| - 0.0033 16.3 0.0 0.0051 15.7 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF815) Mg_chelatase PF01078.16 gi|154151206|ref|YP_001404824.1| - 0.0037 16.4 0.0 0.006 15.7 0.0 1.3 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_33 PF13671.1 gi|154151206|ref|YP_001404824.1| - 0.022 14.6 0.0 0.042 13.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain FtsK_SpoIIIE PF01580.13 gi|154151206|ref|YP_001404824.1| - 0.036 13.5 0.0 0.074 12.5 0.0 1.5 1 0 0 1 1 1 0 FtsK/SpoIIIE family DUF137 PF02006.11 gi|154151207|ref|YP_001404825.1| - 1.4e-66 223.3 0.1 1.7e-66 222.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF137 GHMP_kinases_N PF00288.21 gi|154151208|ref|YP_001404826.1| - 2.9e-06 27.2 1.3 6.7e-06 26.0 0.9 1.6 1 0 0 1 1 1 1 GHMP kinases N terminal domain DFP PF04127.10 gi|154151209|ref|YP_001404827.1| - 5.7e-40 136.9 0.0 1.4e-39 135.6 0.0 1.6 2 0 0 2 2 2 1 DNA / pantothenate metabolism flavoprotein Flavoprotein PF02441.14 gi|154151209|ref|YP_001404827.1| - 2.6e-27 95.0 0.4 6e-27 93.8 0.2 1.6 1 0 0 1 1 1 1 Flavoprotein Pyr_redox PF00070.22 gi|154151209|ref|YP_001404827.1| - 0.0016 18.8 0.0 0.0036 17.6 0.0 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase RTC_insert PF05189.8 gi|154151209|ref|YP_001404827.1| - 0.087 12.8 0.0 0.28 11.2 0.0 1.8 1 0 0 1 1 1 0 RNA 3'-terminal phosphate cyclase (RTC), insert domain Met_10 PF02475.11 gi|154151210|ref|YP_001404828.1| - 4.1e-36 124.4 0.0 5.2e-36 124.1 0.0 1.1 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_26 PF13659.1 gi|154151210|ref|YP_001404828.1| - 4e-10 39.7 0.3 6.8e-10 38.9 0.2 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|154151210|ref|YP_001404828.1| - 1.1e-07 32.3 0.0 1.9e-07 31.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|154151210|ref|YP_001404828.1| - 2.2e-06 27.1 0.0 4.5e-06 26.1 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_15 PF09445.5 gi|154151210|ref|YP_001404828.1| - 4.9e-06 26.1 0.1 6.9e-06 25.7 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_31 PF13847.1 gi|154151210|ref|YP_001404828.1| - 0.00016 21.2 0.0 0.00025 20.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|154151210|ref|YP_001404828.1| - 0.0062 16.8 0.0 0.011 16.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_21 PF05050.7 gi|154151210|ref|YP_001404828.1| - 0.01 15.7 0.0 0.015 15.2 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase FkbM domain Cons_hypoth95 PF03602.10 gi|154151210|ref|YP_001404828.1| - 0.011 15.1 0.0 0.017 14.5 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical protein 95 Methyltransf_23 PF13489.1 gi|154151210|ref|YP_001404828.1| - 0.025 14.3 0.0 0.059 13.0 0.0 1.6 1 1 1 2 2 2 0 Methyltransferase domain PrmA PF06325.8 gi|154151210|ref|YP_001404828.1| - 0.035 13.2 0.0 0.046 12.8 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) DNA_methylase PF00145.12 gi|154151210|ref|YP_001404828.1| - 0.042 12.9 0.0 0.058 12.5 0.0 1.2 1 0 0 1 1 1 0 C-5 cytosine-specific DNA methylase NMD3 PF04981.8 gi|154151211|ref|YP_001404829.1| - 4.1e-59 199.5 0.1 5.1e-59 199.2 0.1 1.1 1 0 0 1 1 1 1 NMD3 family zinc_ribbon_2 PF13240.1 gi|154151211|ref|YP_001404829.1| - 0.0018 17.6 2.3 0.077 12.5 0.2 2.6 2 0 0 2 2 2 1 zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|154151211|ref|YP_001404829.1| - 0.01 14.9 7.8 0.11 11.7 1.7 2.5 2 0 0 2 2 2 0 zinc-ribbon domain DZR PF12773.2 gi|154151211|ref|YP_001404829.1| - 0.076 12.8 14.5 0.61 9.9 6.5 3.1 2 1 0 2 2 2 0 Double zinc ribbon DUF2752 PF10825.3 gi|154151211|ref|YP_001404829.1| - 0.21 11.6 0.2 0.21 11.6 0.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2752) Nudix_N_2 PF14803.1 gi|154151211|ref|YP_001404829.1| - 0.7 9.6 9.9 4.1 7.1 0.2 3.7 3 0 0 3 3 3 0 Nudix N-terminal NOB1_Zn_bind PF08772.6 gi|154151211|ref|YP_001404829.1| - 3.4 7.5 5.9 2.3 8.1 0.2 2.6 2 0 0 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like GFA PF04828.9 gi|154151211|ref|YP_001404829.1| - 6.6 6.7 9.4 23 5.0 0.1 3.4 2 1 0 3 3 3 0 Glutathione-dependent formaldehyde-activating enzyme RecR PF02132.10 gi|154151211|ref|YP_001404829.1| - 8.3 5.9 10.3 0.16 11.4 0.4 2.7 3 0 0 3 3 3 0 RecR protein Zn_Tnp_IS91 PF14319.1 gi|154151211|ref|YP_001404829.1| - 8.9 5.8 15.5 1.4 8.4 2.4 3.2 2 1 1 3 3 3 0 Transposase zinc-binding domain DUF424 PF04242.8 gi|154151212|ref|YP_001404830.1| - 2e-27 95.0 0.0 2.2e-27 94.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF424) TatD_DNase PF01026.16 gi|154151213|ref|YP_001404831.1| - 1.8e-18 66.6 0.0 8.3e-17 61.2 0.0 2.0 1 1 0 1 1 1 1 TatD related DNase DUF372 PF04036.7 gi|154151214|ref|YP_001404832.1| - 9.2e-22 76.2 0.5 1.3e-21 75.7 0.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF372) DUF381 PF04038.7 gi|154151214|ref|YP_001404832.1| - 2.9e-16 59.2 0.0 3.9e-16 58.8 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF381) MCM PF00493.18 gi|154151215|ref|YP_001404833.1| - 2.5e-128 427.5 0.0 4.7e-128 426.6 0.0 1.4 2 0 0 2 2 2 1 MCM2/3/5 family MCM_N PF14551.1 gi|154151215|ref|YP_001404833.1| - 6.7e-13 49.1 0.0 4.9e-12 46.3 0.0 2.5 2 0 0 2 2 2 1 MCM N-terminal domain Mg_chelatase PF01078.16 gi|154151215|ref|YP_001404833.1| - 6.3e-08 32.0 0.0 1.2e-05 24.5 0.0 3.2 3 1 1 4 4 4 1 Magnesium chelatase, subunit ChlI AAA_5 PF07728.9 gi|154151215|ref|YP_001404833.1| - 6.8e-05 22.6 0.0 0.0002 21.0 0.0 1.9 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_3 PF07726.6 gi|154151215|ref|YP_001404833.1| - 0.0001 21.8 0.0 0.00052 19.6 0.0 2.1 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.21 gi|154151215|ref|YP_001404833.1| - 0.012 15.0 0.0 0.07 12.5 0.0 2.1 1 1 0 1 1 1 0 Sigma-54 interaction domain Rep_fac_C PF08542.6 gi|154151216|ref|YP_001404834.1| - 1.2e-18 66.8 0.0 2.8e-18 65.6 0.0 1.6 1 0 0 1 1 1 1 Replication factor C C-terminal domain DNA_pol3_delta2 PF13177.1 gi|154151216|ref|YP_001404834.1| - 4.7e-16 58.8 0.0 7.7e-14 51.6 0.0 2.3 1 1 0 1 1 1 1 DNA polymerase III, delta subunit AAA PF00004.24 gi|154151216|ref|YP_001404834.1| - 2e-14 53.9 0.0 4.2e-14 52.8 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.1 gi|154151216|ref|YP_001404834.1| - 8.8e-08 32.3 0.9 0.026 14.6 0.0 3.2 2 1 1 3 3 3 2 AAA domain RuvB_N PF05496.7 gi|154151216|ref|YP_001404834.1| - 9.2e-08 31.4 0.0 1.1e-06 27.9 0.0 2.5 1 1 0 1 1 1 1 Holliday junction DNA helicase ruvB N-terminus Rad17 PF03215.10 gi|154151216|ref|YP_001404834.1| - 1.1e-06 27.7 0.0 0.0021 16.8 0.0 2.1 1 1 0 2 2 2 2 Rad17 cell cycle checkpoint protein AAA_16 PF13191.1 gi|154151216|ref|YP_001404834.1| - 2.2e-06 27.8 2.8 0.0013 18.7 0.0 2.7 2 2 1 3 3 3 2 AAA ATPase domain AAA_14 PF13173.1 gi|154151216|ref|YP_001404834.1| - 2.8e-06 27.2 0.0 4.8e-06 26.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_3 PF07726.6 gi|154151216|ref|YP_001404834.1| - 0.00019 21.0 0.0 0.00035 20.1 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DNA_pol3_delta PF06144.8 gi|154151216|ref|YP_001404834.1| - 0.0012 18.3 0.0 0.0019 17.7 0.0 1.3 1 0 0 1 1 1 1 DNA polymerase III, delta subunit Mg_chelatase PF01078.16 gi|154151216|ref|YP_001404834.1| - 0.0019 17.4 0.0 0.71 8.9 0.0 2.3 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI TIP49 PF06068.8 gi|154151216|ref|YP_001404834.1| - 0.0028 16.4 0.0 0.32 9.6 0.0 2.8 1 1 1 2 2 2 1 TIP49 C-terminus AAA_17 PF13207.1 gi|154151216|ref|YP_001404834.1| - 0.0028 18.4 0.0 0.0067 17.2 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|154151216|ref|YP_001404834.1| - 0.0033 17.7 0.0 0.0058 16.9 0.0 1.6 1 1 0 1 1 1 1 AAA domain Sigma54_activ_2 PF14532.1 gi|154151216|ref|YP_001404834.1| - 0.0035 17.3 0.0 0.0071 16.3 0.0 1.4 1 0 0 1 1 1 1 Sigma-54 interaction domain Viral_helicase1 PF01443.13 gi|154151216|ref|YP_001404834.1| - 0.0051 16.3 0.0 0.0087 15.5 0.0 1.4 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase TPR_16 PF13432.1 gi|154151216|ref|YP_001404834.1| - 0.012 16.3 0.6 16 6.3 0.1 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_7 PF13176.1 gi|154151216|ref|YP_001404834.1| - 0.013 15.2 0.0 7.4 6.6 0.0 2.7 2 0 0 2 2 2 0 Tetratricopeptide repeat VirE PF05272.6 gi|154151216|ref|YP_001404834.1| - 0.014 14.9 0.1 0.072 12.5 0.0 2.0 2 1 0 2 2 2 0 Virulence-associated protein E Sigma54_activat PF00158.21 gi|154151216|ref|YP_001404834.1| - 0.014 14.8 0.0 5.8 6.3 0.0 2.4 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_2 PF07724.9 gi|154151216|ref|YP_001404834.1| - 0.017 15.0 0.0 0.23 11.3 0.0 2.2 2 0 0 2 2 2 0 AAA domain (Cdc48 subfamily) TPR_14 PF13428.1 gi|154151216|ref|YP_001404834.1| - 0.018 15.6 3.6 2.3 9.0 0.0 3.1 3 0 0 3 3 2 0 Tetratricopeptide repeat Cnl2_NKP2 PF09447.5 gi|154151216|ref|YP_001404834.1| - 0.018 14.6 0.1 1.9 8.2 0.0 2.5 2 0 0 2 2 2 0 Cnl2/NKP2 family protein TPR_6 PF13174.1 gi|154151216|ref|YP_001404834.1| - 0.02 15.3 1.7 6.1 7.5 0.1 3.9 4 0 0 4 4 3 0 Tetratricopeptide repeat IstB_IS21 PF01695.12 gi|154151216|ref|YP_001404834.1| - 0.037 13.4 0.0 0.14 11.5 0.0 1.9 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_25 PF13481.1 gi|154151216|ref|YP_001404834.1| - 0.05 13.0 0.2 0.12 11.7 0.1 1.7 1 1 0 1 1 1 0 AAA domain AAA_24 PF13479.1 gi|154151216|ref|YP_001404834.1| - 0.065 12.8 0.0 0.11 12.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain ArgK PF03308.11 gi|154151216|ref|YP_001404834.1| - 0.071 11.8 0.1 2.4 6.8 0.0 2.1 1 1 1 2 2 2 0 ArgK protein AAA_28 PF13521.1 gi|154151216|ref|YP_001404834.1| - 0.071 13.0 0.1 0.17 11.8 0.0 1.7 2 0 0 2 2 1 0 AAA domain CbiA PF01656.18 gi|154151216|ref|YP_001404834.1| - 0.082 12.2 0.1 0.17 11.2 0.1 1.5 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_5 PF07728.9 gi|154151216|ref|YP_001404834.1| - 0.1 12.3 0.1 0.56 9.9 0.0 2.2 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) DUF2075 PF09848.4 gi|154151216|ref|YP_001404834.1| - 0.13 11.2 0.0 0.41 9.5 0.0 1.8 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_10 PF12846.2 gi|154151216|ref|YP_001404834.1| - 0.28 10.5 3.5 5.2 6.3 0.1 2.7 2 1 1 3 3 3 0 AAA-like domain DUF3821 PF12863.2 gi|154151217|ref|YP_001404835.1| - 3.7e-59 199.9 3.3 4.8e-59 199.5 2.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3821) TPR_2 PF07719.12 gi|154151218|ref|YP_001404836.1| - 3.2e-10 39.1 8.3 0.00069 19.3 0.9 3.3 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_11 PF13414.1 gi|154151218|ref|YP_001404836.1| - 3.3e-09 36.2 8.0 1.4e-05 24.6 0.2 2.3 1 1 1 2 2 2 2 TPR repeat TPR_1 PF00515.23 gi|154151218|ref|YP_001404836.1| - 2.8e-07 29.8 5.1 0.00045 19.7 0.9 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_16 PF13432.1 gi|154151218|ref|YP_001404836.1| - 1.3e-05 25.7 8.1 0.00049 20.6 0.2 2.3 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.1 gi|154151218|ref|YP_001404836.1| - 8.1e-05 22.4 6.6 9.5e-05 22.2 1.2 2.5 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_7 PF13176.1 gi|154151218|ref|YP_001404836.1| - 0.0031 17.1 0.7 1.3 9.0 0.1 2.7 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.1 gi|154151218|ref|YP_001404836.1| - 0.006 16.2 6.7 0.032 13.9 0.4 3.2 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.1 gi|154151218|ref|YP_001404836.1| - 0.0088 16.5 3.6 3.8 8.3 0.0 3.2 2 1 1 3 3 3 1 Tetratricopeptide repeat DUF4245 PF14030.1 gi|154151218|ref|YP_001404836.1| - 0.0098 15.6 0.3 0.02 14.6 0.0 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF4245) TPR_17 PF13431.1 gi|154151218|ref|YP_001404836.1| - 0.022 14.9 0.6 0.17 12.1 0.1 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF3856 PF12968.2 gi|154151218|ref|YP_001404836.1| - 0.051 13.4 1.4 0.41 10.4 0.1 2.5 2 1 0 2 2 2 0 Domain of Unknown Function (DUF3856) TPR_6 PF13174.1 gi|154151218|ref|YP_001404836.1| - 0.17 12.4 3.6 2 9.0 0.2 3.0 4 0 0 4 4 4 0 Tetratricopeptide repeat DUF3366 PF11846.3 gi|154151218|ref|YP_001404836.1| - 0.29 10.9 2.0 2.4 7.9 0.0 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF3366) Dispanin PF04505.7 gi|154151218|ref|YP_001404836.1| - 0.99 8.9 6.0 4.3 6.9 0.0 3.6 3 1 1 4 4 4 0 Interferon-induced transmembrane protein DUF2277 PF10041.4 gi|154151219|ref|YP_001404837.1| - 0.086 12.8 0.0 0.24 11.4 0.0 1.8 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2277) Metallophos_2 PF12850.2 gi|154151220|ref|YP_001404838.1| - 4.1e-05 23.4 0.0 8.6e-05 22.4 0.0 1.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|154151220|ref|YP_001404838.1| - 0.00023 20.6 0.3 0.00055 19.3 0.2 1.7 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_3 PF14582.1 gi|154151220|ref|YP_001404838.1| - 0.0079 15.3 0.1 0.48 9.5 0.0 2.3 1 1 1 2 2 2 2 Metallophosphoesterase, calcineurin superfamily DNA_pol_E_B PF04042.11 gi|154151220|ref|YP_001404838.1| - 0.11 11.7 0.0 0.26 10.4 0.0 1.5 1 1 0 1 1 1 0 DNA polymerase alpha/epsilon subunit B PRP1_N PF06424.7 gi|154151220|ref|YP_001404838.1| - 0.18 12.1 0.0 0.27 11.5 0.0 1.2 1 0 0 1 1 1 0 PRP1 splicing factor, N-terminal DEAD_assoc PF08494.6 gi|154151221|ref|YP_001404839.1| - 2.6e-42 144.6 0.0 5.3e-42 143.6 0.0 1.5 1 0 0 1 1 1 1 DEAD/H associated DEAD PF00270.24 gi|154151221|ref|YP_001404839.1| - 1.7e-32 112.2 0.0 3.7e-32 111.1 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|154151221|ref|YP_001404839.1| - 7.3e-19 67.4 0.0 1e-17 63.7 0.1 2.5 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|154151221|ref|YP_001404839.1| - 4e-07 30.0 0.0 1.1e-06 28.5 0.0 1.7 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit SNF2_N PF00176.18 gi|154151221|ref|YP_001404839.1| - 0.0004 19.2 0.0 0.00076 18.3 0.0 1.4 1 0 0 1 1 1 1 SNF2 family N-terminal domain AAA_22 PF13401.1 gi|154151221|ref|YP_001404839.1| - 0.0042 17.2 0.0 0.018 15.1 0.0 2.1 2 0 0 2 2 2 1 AAA domain Zn-ribbon_8 PF09723.5 gi|154151221|ref|YP_001404839.1| - 0.049 13.5 1.1 0.83 9.6 0.1 2.4 2 0 0 2 2 2 0 Zinc ribbon domain PhoH PF02562.11 gi|154151221|ref|YP_001404839.1| - 0.074 12.2 0.1 0.21 10.7 0.0 1.7 2 0 0 2 2 2 0 PhoH-like protein TBP PF00352.16 gi|154151222|ref|YP_001404840.1| - 4.4e-57 189.4 0.4 4.7e-29 99.5 0.0 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.3 gi|154151222|ref|YP_001404840.1| - 2.7e-06 27.3 0.0 0.043 13.8 0.0 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) DUF3252 PF11623.3 gi|154151222|ref|YP_001404840.1| - 0.054 12.9 0.0 2.3 7.6 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3252) PucR PF07905.6 gi|154151222|ref|YP_001404840.1| - 0.073 12.6 0.0 9 5.8 0.0 2.2 1 1 1 2 2 2 0 Purine catabolism regulatory protein-like family AMP-binding PF00501.23 gi|154151223|ref|YP_001404841.1| - 1.6e-83 280.4 0.0 1.9e-83 280.2 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|154151223|ref|YP_001404841.1| - 1.1e-20 74.3 0.2 2.1e-20 73.4 0.2 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain C1q PF00386.16 gi|154151223|ref|YP_001404841.1| - 0.051 13.5 0.0 0.15 12.0 0.0 1.7 1 0 0 1 1 1 0 C1q domain AMP-binding PF00501.23 gi|154151224|ref|YP_001404842.1| - 1.3e-91 307.0 0.0 1.6e-91 306.7 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|154151224|ref|YP_001404842.1| - 6.3e-19 68.6 0.1 1.1e-18 67.9 0.1 1.4 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain RHH_1 PF01402.16 gi|154151224|ref|YP_001404842.1| - 0.00027 20.6 0.0 0.00077 19.2 0.0 1.8 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family RHH_3 PF12651.2 gi|154151224|ref|YP_001404842.1| - 0.13 11.9 0.0 0.26 11.0 0.0 1.4 1 0 0 1 1 1 0 Ribbon-helix-helix domain DUF1624 PF07786.7 gi|154151225|ref|YP_001404843.1| - 6e-72 241.5 16.7 6.9e-72 241.4 11.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1624) Acyl_transf_3 PF01757.17 gi|154151225|ref|YP_001404843.1| - 2e-08 33.4 27.0 0.00024 20.0 9.9 2.3 1 1 1 2 2 2 2 Acyltransferase family OpgC_C PF10129.4 gi|154151225|ref|YP_001404843.1| - 6.7e-05 21.7 19.7 6.9e-05 21.6 4.5 2.8 1 1 0 2 2 2 2 OpgC protein P-II PF00543.17 gi|154151227|ref|YP_001404845.1| - 2.9e-36 124.0 2.3 3.2e-36 123.8 1.6 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II Ammonium_transp PF00909.16 gi|154151228|ref|YP_001404846.1| - 1.5e-130 435.2 43.0 1.7e-130 435.0 29.8 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family Ammonium_transp PF00909.16 gi|154151230|ref|YP_001404848.1| - 2e-128 428.2 44.0 2.2e-128 428.1 30.5 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family MscS_TM PF12794.2 gi|154151230|ref|YP_001404848.1| - 0.012 14.2 0.5 0.012 14.2 0.3 3.8 3 1 1 5 5 5 0 Mechanosensitive ion channel inner membrane domain 1 Gln-synt_C PF00120.19 gi|154151231|ref|YP_001404849.1| - 2.2e-98 328.5 0.0 2.8e-98 328.1 0.0 1.1 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.14 gi|154151231|ref|YP_001404849.1| - 1.1e-28 98.6 0.0 2.4e-28 97.5 0.0 1.6 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain GATase_2 PF00310.16 gi|154151232|ref|YP_001404850.1| - 1e-24 86.9 0.0 2.5e-22 79.1 0.0 2.0 2 0 0 2 2 2 2 Glutamine amidotransferases class-II GATase_6 PF13522.1 gi|154151232|ref|YP_001404850.1| - 1.2e-16 60.9 0.0 5.8e-16 58.6 0.0 1.9 1 1 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.1 gi|154151232|ref|YP_001404850.1| - 3.6e-10 39.6 0.0 8.7e-09 35.1 0.0 2.2 1 1 0 1 1 1 1 Glutamine amidotransferase domain GATase_4 PF13230.1 gi|154151232|ref|YP_001404850.1| - 0.04 12.6 0.0 0.11 11.1 0.0 1.7 2 1 0 2 2 2 0 Glutamine amidotransferases class-II Glu_synthase PF01645.12 gi|154151233|ref|YP_001404851.1| - 5.4e-135 450.0 0.2 8.4e-135 449.4 0.1 1.3 1 0 0 1 1 1 1 Conserved region in glutamate synthase FMN_dh PF01070.13 gi|154151233|ref|YP_001404851.1| - 8.7e-13 47.8 7.2 3.3e-09 36.0 2.1 3.2 3 0 0 3 3 3 3 FMN-dependent dehydrogenase Glu_syn_central PF04898.9 gi|154151233|ref|YP_001404851.1| - 2.1e-11 43.6 0.1 4.2e-05 22.9 0.0 2.7 2 1 0 2 2 2 2 Glutamate synthase central domain NMO PF03060.10 gi|154151233|ref|YP_001404851.1| - 2.5e-10 40.0 3.2 4.1e-10 39.3 2.2 1.3 1 0 0 1 1 1 1 Nitronate monooxygenase Fer4_10 PF13237.1 gi|154151233|ref|YP_001404851.1| - 8.3e-09 35.1 20.8 5.1e-07 29.3 7.7 2.8 2 1 1 3 3 3 2 4Fe-4S dicluster domain IMPDH PF00478.20 gi|154151233|ref|YP_001404851.1| - 7.8e-08 31.5 5.7 1.1e-06 27.7 3.9 2.3 2 1 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain Fer4_9 PF13187.1 gi|154151233|ref|YP_001404851.1| - 2.7e-07 30.7 13.0 2.7e-07 30.7 9.0 2.6 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|154151233|ref|YP_001404851.1| - 4.6e-07 30.1 17.4 4.9e-06 26.8 8.5 2.9 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_21 PF14697.1 gi|154151233|ref|YP_001404851.1| - 6.6e-06 25.8 8.8 6.6e-06 25.8 6.1 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|154151233|ref|YP_001404851.1| - 8.1e-06 26.4 10.5 0.0026 18.4 0.3 3.4 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4 PF00037.22 gi|154151233|ref|YP_001404851.1| - 2.8e-05 23.5 10.8 0.0002 20.8 1.4 3.3 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_8 PF13183.1 gi|154151233|ref|YP_001404851.1| - 0.00047 20.1 17.7 0.0061 16.5 9.5 3.0 2 1 1 3 3 3 2 4Fe-4S dicluster domain DHO_dh PF01180.16 gi|154151233|ref|YP_001404851.1| - 0.00068 18.6 3.9 0.0059 15.6 2.7 2.1 1 1 0 1 1 1 1 Dihydroorotate dehydrogenase Fer4_2 PF12797.2 gi|154151233|ref|YP_001404851.1| - 0.0012 18.6 21.0 0.027 14.3 1.9 3.6 3 0 0 3 3 3 2 4Fe-4S binding domain His_biosynth PF00977.16 gi|154151233|ref|YP_001404851.1| - 0.0014 17.9 0.2 0.0033 16.7 0.1 1.6 1 0 0 1 1 1 1 Histidine biosynthesis protein PcrB PF01884.12 gi|154151233|ref|YP_001404851.1| - 0.0024 17.1 1.1 0.44 9.7 0.5 2.6 2 1 1 3 3 2 1 PcrB family Fer4_18 PF13746.1 gi|154151233|ref|YP_001404851.1| - 0.0039 17.5 19.7 0.041 14.3 0.7 3.3 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|154151233|ref|YP_001404851.1| - 0.01 16.1 2.3 0.01 16.1 1.6 3.8 4 0 0 4 4 3 0 4Fe-4S binding domain Fer4_6 PF12837.2 gi|154151233|ref|YP_001404851.1| - 0.012 15.4 0.9 0.012 15.4 0.6 3.1 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_17 PF13534.1 gi|154151233|ref|YP_001404851.1| - 0.018 15.4 17.2 2 8.8 1.6 3.4 2 1 2 4 4 4 0 4Fe-4S dicluster domain IGPS PF00218.16 gi|154151233|ref|YP_001404851.1| - 0.22 10.5 0.6 0.37 9.8 0.1 1.5 2 0 0 2 2 2 0 Indole-3-glycerol phosphate synthase Fer4_11 PF13247.1 gi|154151233|ref|YP_001404851.1| - 5.4 6.9 12.2 0.22 11.4 3.3 2.5 3 0 0 3 3 3 0 4Fe-4S dicluster domain GXGXG PF01493.14 gi|154151234|ref|YP_001404852.1| - 4e-36 123.9 9.2 4.7e-36 123.6 6.4 1.0 1 0 0 1 1 1 1 GXGXG motif FrhB_FdhB_C PF04432.8 gi|154151235|ref|YP_001404853.1| - 4.1e-37 127.0 1.3 7.5e-37 126.2 0.0 2.0 2 1 1 3 3 3 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus FrhB_FdhB_N PF04422.8 gi|154151235|ref|YP_001404853.1| - 1.1e-21 76.5 0.0 2e-21 75.6 0.0 1.5 1 0 0 1 1 1 1 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term Fer4 PF00037.22 gi|154151235|ref|YP_001404853.1| - 1.1e-08 34.3 3.3 1.1e-08 34.3 2.3 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|154151235|ref|YP_001404853.1| - 3.2e-08 33.0 18.3 1.9e-07 30.6 1.8 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_10 PF13237.1 gi|154151235|ref|YP_001404853.1| - 3.4e-07 29.9 9.8 8.2e-07 28.7 6.8 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|154151235|ref|YP_001404853.1| - 2.9e-06 27.5 11.4 2.9e-06 27.5 7.9 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|154151235|ref|YP_001404853.1| - 6.8e-06 25.6 3.7 6.8e-06 25.6 2.6 3.4 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_4 PF12800.2 gi|154151235|ref|YP_001404853.1| - 9.8e-06 25.5 15.7 0.0008 19.5 1.8 3.4 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|154151235|ref|YP_001404853.1| - 1.7e-05 24.9 10.4 1.7e-05 24.9 7.2 1.9 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.1 gi|154151235|ref|YP_001404853.1| - 4.7e-05 24.0 11.6 0.0018 18.9 7.7 3.0 2 1 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_15 PF13459.1 gi|154151235|ref|YP_001404853.1| - 0.0002 21.8 2.2 0.0066 16.9 0.4 2.8 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_21 PF14697.1 gi|154151235|ref|YP_001404853.1| - 0.0012 18.5 12.0 0.0058 16.4 1.8 2.9 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|154151235|ref|YP_001404853.1| - 0.0045 17.3 0.7 0.0045 17.3 0.5 2.8 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|154151235|ref|YP_001404853.1| - 0.0071 16.3 14.6 0.02 14.9 8.2 2.6 2 1 2 4 4 3 3 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|154151235|ref|YP_001404853.1| - 0.039 14.5 8.9 0.039 14.5 6.2 2.9 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_11 PF13247.1 gi|154151235|ref|YP_001404853.1| - 0.081 12.8 4.6 0.21 11.5 3.2 1.6 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|154151235|ref|YP_001404853.1| - 0.2 12.0 11.5 0.43 11.0 2.7 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_17 PF13534.1 gi|154151235|ref|YP_001404853.1| - 3.5 8.0 16.6 0.19 12.0 1.9 2.6 2 1 2 4 4 3 0 4Fe-4S dicluster domain P-II PF00543.17 gi|154151237|ref|YP_001404855.1| - 1.3e-38 131.5 0.7 1.5e-38 131.3 0.5 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II DUF1211 PF06736.6 gi|154151238|ref|YP_001404856.1| - 9.9e-26 89.7 6.7 9.9e-26 89.7 4.6 2.1 3 0 0 3 3 3 1 Protein of unknown function (DUF1211) DUF3278 PF11683.3 gi|154151238|ref|YP_001404856.1| - 0.39 10.7 7.8 0.71 9.8 0.2 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3278) Response_reg PF00072.19 gi|154151239|ref|YP_001404857.1| - 2.7e-20 72.4 0.0 3.6e-20 72.0 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain Response_reg PF00072.19 gi|154151240|ref|YP_001404858.1| - 8.3e-07 29.0 0.0 1.1e-06 28.6 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain NPCBM_assoc PF10633.4 gi|154151241|ref|YP_001404859.1| - 2.9e-09 36.8 9.8 0.0059 16.6 0.1 4.3 3 1 0 3 3 3 3 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.6 gi|154151241|ref|YP_001404859.1| - 3.2e-06 27.1 13.6 0.0075 16.3 0.6 4.3 3 2 1 4 4 4 2 CARDB DUF3869 PF12985.2 gi|154151241|ref|YP_001404859.1| - 5 7.6 15.5 4.8 7.6 1.5 3.5 2 1 1 3 3 3 0 Domain of unknown function (DUF3869) CARDB PF07705.6 gi|154151242|ref|YP_001404860.1| - 1.2e-09 38.0 2.3 0.007 16.4 0.0 3.7 3 1 0 3 3 3 3 CARDB NPCBM_assoc PF10633.4 gi|154151242|ref|YP_001404860.1| - 5.3e-05 23.1 8.2 0.0019 18.1 0.1 5.3 5 1 0 5 5 5 1 NPCBM-associated, NEW3 domain of alpha-galactosidase TRAP_alpha PF03896.11 gi|154151242|ref|YP_001404860.1| - 0.0086 15.1 0.0 0.029 13.3 0.0 1.9 2 0 0 2 2 2 1 Translocon-associated protein (TRAP), alpha subunit DUF11 PF01345.13 gi|154151242|ref|YP_001404860.1| - 0.063 13.3 0.2 0.063 13.3 0.1 4.5 4 0 0 4 4 4 0 Domain of unknown function DUF11 DUF756 PF05506.7 gi|154151242|ref|YP_001404860.1| - 0.17 12.3 0.3 32 5.0 0.0 3.6 3 1 1 4 4 4 0 Domain of unknown function (DUF756) MMPL PF03176.10 gi|154151243|ref|YP_001404861.1| - 5.6e-46 156.7 23.3 3.6e-24 85.1 7.2 3.2 3 0 0 3 3 3 2 MMPL family Sterol-sensing PF12349.3 gi|154151243|ref|YP_001404861.1| - 2e-11 43.5 20.5 4.1e-08 32.8 4.0 2.7 2 0 0 2 2 2 2 Sterol-sensing domain of SREBP cleavage-activation SecD_SecF PF02355.11 gi|154151243|ref|YP_001404861.1| - 1.4e-06 27.6 10.0 1.4e-06 27.6 6.9 2.7 3 0 0 3 3 3 2 Protein export membrane protein Patched PF02460.13 gi|154151243|ref|YP_001404861.1| - 0.00034 18.7 26.9 0.0042 15.0 4.2 2.2 2 0 0 2 2 2 2 Patched family ACR_tran PF00873.14 gi|154151243|ref|YP_001404861.1| - 0.0067 13.9 30.9 0.04 11.3 3.1 2.1 2 0 0 2 2 2 2 AcrB/AcrD/AcrF family CARDB PF07705.6 gi|154151244|ref|YP_001404862.1| - 2.7e-08 33.7 3.6 0.029 14.4 0.4 3.4 3 1 0 3 3 3 3 CARDB NPCBM_assoc PF10633.4 gi|154151244|ref|YP_001404862.1| - 2.8e-05 24.0 7.5 0.089 12.8 0.2 4.3 4 2 0 4 4 4 2 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF11 PF01345.13 gi|154151244|ref|YP_001404862.1| - 0.0005 20.0 5.6 0.054 13.5 0.3 2.8 2 0 0 2 2 2 2 Domain of unknown function DUF11 DUF4232 PF14016.1 gi|154151244|ref|YP_001404862.1| - 0.18 11.4 5.0 4.7 6.8 0.1 3.3 3 1 0 3 3 3 0 Protein of unknown function (DUF4232) TetR_N PF00440.18 gi|154151245|ref|YP_001404863.1| - 2.1e-12 46.4 0.4 3.4e-12 45.7 0.3 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_6 PF13977.1 gi|154151245|ref|YP_001404863.1| - 0.036 14.0 0.0 0.07 13.1 0.0 1.5 1 0 0 1 1 1 0 Bacterial transcriptional repressor DUF642 PF04862.7 gi|154151245|ref|YP_001404863.1| - 0.089 12.4 0.1 0.13 11.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF642) TM_helix PF05552.7 gi|154151246|ref|YP_001404864.1| - 2.3e-14 52.8 4.9 1.5e-09 37.3 0.4 3.6 4 0 0 4 4 4 2 Conserved TM helix PDGLE PF13190.1 gi|154151246|ref|YP_001404864.1| - 0.017 14.8 0.5 0.017 14.8 0.3 2.6 4 0 0 4 4 4 0 PDGLE domain PIG-P PF08510.7 gi|154151246|ref|YP_001404864.1| - 6.1 6.4 7.9 3.5 7.2 4.0 1.6 1 1 0 1 1 1 0 PIG-P TetR_N PF00440.18 gi|154151247|ref|YP_001404865.1| - 3e-09 36.3 0.1 5.3e-09 35.5 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family TetR_C_6 PF13977.1 gi|154151247|ref|YP_001404865.1| - 0.066 13.2 0.6 0.19 11.7 0.0 2.0 2 1 1 3 3 3 0 Bacterial transcriptional repressor tRNA_NucTransf2 PF09249.6 gi|154151248|ref|YP_001404866.1| - 5.5e-46 155.1 0.0 2e-45 153.3 0.0 1.8 2 0 0 2 2 2 1 tRNA nucleotidyltransferase, second domain NTP_transf_2 PF01909.18 gi|154151248|ref|YP_001404866.1| - 2.8e-07 30.7 0.0 5.7e-07 29.7 0.0 1.5 1 0 0 1 1 1 1 Nucleotidyltransferase domain LigT_PEase PF02834.11 gi|154151249|ref|YP_001404867.1| - 5.7e-18 64.6 0.0 9e-08 31.9 0.0 2.1 2 0 0 2 2 2 2 LigT like Phosphoesterase 2_5_RNA_ligase2 PF13563.1 gi|154151249|ref|YP_001404867.1| - 0.00015 21.4 0.0 0.00025 20.7 0.0 1.5 1 1 0 1 1 1 1 2'-5' RNA ligase superfamily AKAP7_NLS PF10469.4 gi|154151249|ref|YP_001404867.1| - 0.14 11.8 0.0 1.8 8.2 0.0 2.0 1 1 0 1 1 1 0 AKAP7 2'5' RNA ligase-like domain Glutaredoxin PF00462.19 gi|154151250|ref|YP_001404868.1| - 2.4e-07 30.6 0.0 3.1e-07 30.2 0.0 1.2 1 0 0 1 1 1 1 Glutaredoxin DUF836 PF05768.9 gi|154151250|ref|YP_001404868.1| - 0.029 14.6 0.0 0.03 14.6 0.0 1.1 1 0 0 1 1 1 0 Glutaredoxin-like domain (DUF836) NRDD PF13597.1 gi|154151251|ref|YP_001404869.1| - 5.2e-128 427.4 0.0 6.8e-128 427.1 0.0 1.0 1 0 0 1 1 1 1 Anaerobic ribonucleoside-triphosphate reductase ATP-cone PF03477.11 gi|154151251|ref|YP_001404869.1| - 0.0007 19.9 0.0 0.0017 18.7 0.0 1.6 1 0 0 1 1 1 1 ATP cone domain DUF2953 PF11167.3 gi|154151251|ref|YP_001404869.1| - 0.097 12.5 0.7 0.19 11.6 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2953) CS PF04969.11 gi|154151252|ref|YP_001404870.1| - 0.081 13.4 0.0 0.12 12.9 0.0 1.3 1 0 0 1 1 1 0 CS domain HTH_5 PF01022.15 gi|154151253|ref|YP_001404871.1| - 3.5e-09 36.1 0.3 9.3e-08 31.6 0.1 2.5 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.2 gi|154151253|ref|YP_001404871.1| - 5.4e-08 32.5 1.2 1.9e-06 27.5 0.1 2.4 2 0 0 2 2 2 1 Helix-turn-helix domain MarR_2 PF12802.2 gi|154151253|ref|YP_001404871.1| - 8.4e-06 25.3 1.5 0.0098 15.5 0.2 2.5 2 0 0 2 2 2 2 MarR family TrmB PF01978.14 gi|154151253|ref|YP_001404871.1| - 0.0011 18.5 0.1 0.44 10.2 0.0 2.3 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB Sulfolobus_pRN PF05584.6 gi|154151253|ref|YP_001404871.1| - 0.0012 18.8 0.2 0.019 14.9 0.0 2.4 2 0 0 2 2 2 1 Sulfolobus plasmid regulatory protein HTH_27 PF13463.1 gi|154151253|ref|YP_001404871.1| - 0.0012 19.1 0.6 0.5 10.7 0.0 2.9 3 0 0 3 3 3 1 Winged helix DNA-binding domain HTH_Crp_2 PF13545.1 gi|154151253|ref|YP_001404871.1| - 0.0036 17.0 0.3 0.34 10.7 0.1 2.6 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_24 PF13412.1 gi|154151253|ref|YP_001404871.1| - 0.0078 15.5 0.3 0.057 12.8 0.1 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding DUF4224 PF13986.1 gi|154151253|ref|YP_001404871.1| - 0.0079 15.7 0.1 0.017 14.6 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4224) Rrf2 PF02082.15 gi|154151253|ref|YP_001404871.1| - 0.041 13.9 0.7 5.8 7.1 0.0 3.0 3 0 0 3 3 3 0 Transcriptional regulator ADIP PF11559.3 gi|154151253|ref|YP_001404871.1| - 0.051 13.4 0.8 0.079 12.8 0.6 1.3 1 0 0 1 1 1 0 Afadin- and alpha -actinin-Binding BRICHOS PF04089.9 gi|154151253|ref|YP_001404871.1| - 0.059 13.2 0.4 1 9.2 0.0 2.2 1 1 1 2 2 2 0 BRICHOS domain DDRGK PF09756.4 gi|154151253|ref|YP_001404871.1| - 0.077 12.4 0.8 0.4 10.0 0.0 2.2 2 1 1 3 3 3 0 DDRGK domain KTSC PF13619.1 gi|154151256|ref|YP_001404874.1| - 3.3e-20 71.4 0.1 3.8e-20 71.2 0.1 1.0 1 0 0 1 1 1 1 KTSC domain Sod_Fe_C PF02777.13 gi|154151257|ref|YP_001404875.1| - 5.9e-40 135.3 0.8 1.1e-39 134.5 0.5 1.4 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.17 gi|154151257|ref|YP_001404875.1| - 4.7e-30 103.6 1.1 8.5e-30 102.8 0.8 1.4 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, alpha-hairpin domain IMPDH PF00478.20 gi|154151258|ref|YP_001404876.1| - 9.4e-137 455.6 10.1 1.1e-136 455.4 7.0 1.0 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain CBS PF00571.23 gi|154151258|ref|YP_001404876.1| - 1.8e-26 91.6 1.6 1e-12 47.6 0.1 3.2 3 0 0 3 3 3 2 CBS domain NMO PF03060.10 gi|154151258|ref|YP_001404876.1| - 7.8e-14 51.5 9.5 9.1e-10 38.1 4.1 2.4 2 0 0 2 2 2 2 Nitronate monooxygenase FMN_dh PF01070.13 gi|154151258|ref|YP_001404876.1| - 5.9e-12 45.1 5.1 2.2e-11 43.2 3.3 2.0 2 0 0 2 2 2 1 FMN-dependent dehydrogenase His_biosynth PF00977.16 gi|154151258|ref|YP_001404876.1| - 1.4e-05 24.4 4.9 0.00089 18.5 0.1 2.9 2 1 1 3 3 3 2 Histidine biosynthesis protein Dus PF01207.12 gi|154151258|ref|YP_001404876.1| - 0.00057 18.8 2.3 0.019 13.8 0.1 2.3 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) Glu_synthase PF01645.12 gi|154151258|ref|YP_001404876.1| - 0.0012 17.8 8.2 0.0022 16.9 5.7 1.3 1 0 0 1 1 1 1 Conserved region in glutamate synthase ThiG PF05690.9 gi|154151258|ref|YP_001404876.1| - 0.0061 15.6 5.2 0.0061 15.6 3.6 2.6 3 1 0 3 3 3 1 Thiazole biosynthesis protein ThiG EAL PF00563.15 gi|154151258|ref|YP_001404876.1| - 0.072 12.5 0.3 0.23 10.9 0.1 1.8 2 0 0 2 2 2 0 EAL domain DUF556 PF04476.8 gi|154151259|ref|YP_001404877.1| - 1.3e-77 260.2 0.7 1.4e-77 260.0 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF556) His_biosynth PF00977.16 gi|154151260|ref|YP_001404878.1| - 5.5e-15 55.2 0.0 7.4e-15 54.8 0.0 1.2 1 0 0 1 1 1 1 Histidine biosynthesis protein Thymidylate_kin PF02223.12 gi|154151261|ref|YP_001404879.1| - 6.1e-39 133.3 0.0 7.6e-39 133.0 0.0 1.1 1 0 0 1 1 1 1 Thymidylate kinase AAA_28 PF13521.1 gi|154151261|ref|YP_001404879.1| - 0.00023 21.1 0.0 0.00047 20.1 0.0 1.5 1 1 1 2 2 2 1 AAA domain AAA_33 PF13671.1 gi|154151261|ref|YP_001404879.1| - 0.0014 18.5 0.0 0.012 15.4 0.0 2.3 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|154151261|ref|YP_001404879.1| - 0.0015 18.8 0.0 0.0054 17.0 0.0 2.0 1 1 1 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|154151261|ref|YP_001404879.1| - 0.0045 17.7 1.1 0.044 14.6 0.1 2.4 1 1 0 2 2 2 1 AAA domain AAA_16 PF13191.1 gi|154151261|ref|YP_001404879.1| - 0.0092 15.9 0.1 0.018 15.0 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.1 gi|154151261|ref|YP_001404879.1| - 0.013 15.0 0.1 0.43 10.1 0.0 2.4 2 1 0 2 2 2 0 AAA domain AAA_29 PF13555.1 gi|154151261|ref|YP_001404879.1| - 0.019 14.4 0.2 0.038 13.5 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_22 PF13401.1 gi|154151261|ref|YP_001404879.1| - 0.027 14.6 0.0 0.076 13.1 0.0 1.7 2 0 0 2 2 2 0 AAA domain KTI12 PF08433.5 gi|154151261|ref|YP_001404879.1| - 0.07 12.3 0.1 0.24 10.5 0.0 1.9 2 1 0 2 2 2 0 Chromatin associated protein KTI12 NB-ARC PF00931.17 gi|154151261|ref|YP_001404879.1| - 0.1 11.4 0.0 2 7.2 0.0 2.0 2 0 0 2 2 2 0 NB-ARC domain KAP_NTPase PF07693.9 gi|154151261|ref|YP_001404879.1| - 0.16 10.9 0.0 0.16 10.9 0.0 1.1 1 0 0 1 1 1 0 KAP family P-loop domain ABC_tran PF00005.22 gi|154151261|ref|YP_001404879.1| - 0.16 12.2 0.0 0.33 11.2 0.0 1.6 2 0 0 2 2 2 0 ABC transporter AAA_25 PF13481.1 gi|154151261|ref|YP_001404879.1| - 0.19 11.1 1.8 3.4 7.0 0.1 2.2 1 1 1 2 2 2 0 AAA domain EVE PF01878.13 gi|154151262|ref|YP_001404880.1| - 2.7e-19 69.5 0.0 4.8e-19 68.7 0.0 1.4 1 0 0 1 1 1 1 EVE domain HNH PF01844.18 gi|154151262|ref|YP_001404880.1| - 2.6e-10 39.9 3.8 4.7e-10 39.1 2.6 1.3 1 0 0 1 1 1 1 HNH endonuclease DUF968 PF06147.6 gi|154151262|ref|YP_001404880.1| - 0.036 13.9 0.4 0.058 13.2 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF968) HNH_2 PF13391.1 gi|154151262|ref|YP_001404880.1| - 0.081 12.7 0.5 0.19 11.5 0.4 1.6 1 0 0 1 1 1 0 HNH endonuclease C1_1 PF00130.17 gi|154151262|ref|YP_001404880.1| - 0.17 11.6 1.1 9.3 6.0 0.1 2.3 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) DUF164 PF02591.10 gi|154151262|ref|YP_001404880.1| - 0.28 11.0 2.3 5.2 6.9 0.1 3.0 3 0 0 3 3 3 0 Putative zinc ribbon domain tRNA-synt_1 PF00133.17 gi|154151263|ref|YP_001404881.1| - 3e-134 448.2 0.6 1.8e-133 445.6 0.4 1.9 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.8 gi|154151263|ref|YP_001404881.1| - 5.8e-35 120.3 0.0 1.2e-34 119.3 0.0 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.6 gi|154151263|ref|YP_001404881.1| - 8.2e-29 100.4 0.9 4.6e-15 55.1 0.0 3.6 3 1 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1_2 PF13603.1 gi|154151263|ref|YP_001404881.1| - 1.9e-05 24.0 0.0 7.3e-05 22.1 0.0 1.9 1 1 1 2 2 2 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1e PF01406.14 gi|154151263|ref|YP_001404881.1| - 8.5e-05 21.8 0.0 0.19 10.8 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1d PF00750.14 gi|154151263|ref|YP_001404881.1| - 0.0028 16.5 0.0 0.92 8.2 0.0 2.7 2 1 1 3 3 3 2 tRNA synthetases class I (R) DUF92 PF01940.11 gi|154151264|ref|YP_001404882.1| - 8.8e-65 218.0 21.0 8.8e-65 218.0 14.6 2.6 3 0 0 3 3 3 1 Integral membrane protein DUF92 PK_C PF02887.11 gi|154151266|ref|YP_001404884.1| - 1.4e-24 85.8 2.0 1.8e-24 85.5 1.4 1.1 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain MMR_HSR1_C PF08438.5 gi|154151267|ref|YP_001404885.1| - 7.2e-30 103.4 0.2 1.4e-29 102.5 0.1 1.5 1 0 0 1 1 1 1 GTPase of unknown function C-terminal MMR_HSR1 PF01926.18 gi|154151267|ref|YP_001404885.1| - 5.5e-18 65.0 0.0 1.3e-17 63.8 0.0 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase TGS PF02824.16 gi|154151267|ref|YP_001404885.1| - 1.9e-12 46.8 0.1 5.3e-12 45.3 0.0 1.8 2 0 0 2 2 2 1 TGS domain FeoB_N PF02421.13 gi|154151267|ref|YP_001404885.1| - 6.4e-10 38.5 0.3 4.9e-08 32.4 0.0 2.8 3 0 0 3 3 3 1 Ferrous iron transport protein B Miro PF08477.8 gi|154151267|ref|YP_001404885.1| - 0.049 14.1 0.0 5.5 7.5 0.0 2.7 2 1 0 2 2 2 0 Miro-like protein Metallophos_2 PF12850.2 gi|154151270|ref|YP_001404888.1| - 1e-12 48.1 0.0 1.4e-12 47.7 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.23 gi|154151270|ref|YP_001404888.1| - 8e-12 44.9 0.2 3.2e-11 43.0 0.1 1.8 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase DUF217 PF02697.9 gi|154151271|ref|YP_001404889.1| - 3e-07 30.6 0.0 3.1e-07 30.5 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized ACR, COG1753 RHH_1 PF01402.16 gi|154151271|ref|YP_001404889.1| - 0.075 12.9 0.0 0.23 11.4 0.0 1.8 1 1 0 1 1 1 0 Ribbon-helix-helix protein, copG family DUF2762 PF10960.3 gi|154151272|ref|YP_001404890.1| - 0.55 9.9 3.2 21 4.9 0.0 3.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2762) Enkurin PF13864.1 gi|154151272|ref|YP_001404890.1| - 1.3 9.3 16.9 0.92 9.7 1.8 3.3 3 1 0 3 3 3 0 Calmodulin-binding Mnd1 PF03962.10 gi|154151272|ref|YP_001404890.1| - 2.4 7.7 18.4 15 5.2 3.9 4.0 3 1 0 3 3 3 0 Mnd1 family CTP_transf_2 PF01467.21 gi|154151273|ref|YP_001404891.1| - 1.5e-16 60.8 0.0 1.9e-16 60.4 0.0 1.1 1 0 0 1 1 1 1 Cytidylyltransferase AIRC PF00731.15 gi|154151274|ref|YP_001404892.1| - 4.2e-19 68.3 2.9 4.2e-19 68.3 2.0 2.0 2 1 1 3 3 3 1 AIR carboxylase tRNA-synt_His PF13393.1 gi|154151276|ref|YP_001404894.1| - 1e-62 212.0 0.1 1.3e-62 211.6 0.0 1.1 1 0 0 1 1 1 1 Histidyl-tRNA synthetase tRNA-synt_2b PF00587.20 gi|154151276|ref|YP_001404894.1| - 1.9e-22 79.6 0.1 2.8e-22 79.1 0.1 1.2 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.15 gi|154151276|ref|YP_001404894.1| - 4.3e-12 45.8 0.0 9e-12 44.7 0.0 1.5 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2d PF01409.15 gi|154151276|ref|YP_001404894.1| - 0.0017 17.6 0.0 0.0031 16.7 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA-synt_2 PF00152.15 gi|154151276|ref|YP_001404894.1| - 0.026 13.2 0.3 6.7 5.3 0.0 2.9 3 0 0 3 3 3 0 tRNA synthetases class II (D, K and N) Topo-VIb_trans PF09239.6 gi|154151277|ref|YP_001404895.1| - 1.3e-69 232.7 0.0 2.7e-69 231.8 0.0 1.5 1 0 0 1 1 1 1 Topoisomerase VI B subunit, transducer HATPase_c PF02518.21 gi|154151277|ref|YP_001404895.1| - 1.8e-12 46.9 0.0 2.1e-11 43.4 0.0 2.7 2 1 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.1 gi|154151277|ref|YP_001404895.1| - 8.6e-10 38.4 0.0 3.1e-09 36.6 0.0 2.0 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FbpA PF05833.6 gi|154151277|ref|YP_001404895.1| - 0.00015 20.4 0.0 0.00044 18.9 0.0 1.7 2 0 0 2 2 2 1 Fibronectin-binding protein A N-terminus (FbpA) Ribosomal_S13 PF00416.17 gi|154151277|ref|YP_001404895.1| - 0.035 14.5 0.0 0.091 13.2 0.0 1.7 1 0 0 1 1 1 0 Ribosomal protein S13/S18 HATPase_c_5 PF14501.1 gi|154151277|ref|YP_001404895.1| - 0.081 12.6 0.0 0.29 10.8 0.0 1.9 2 0 0 2 2 2 0 GHKL domain TP6A_N PF04406.9 gi|154151278|ref|YP_001404896.1| - 5.6e-20 70.7 0.0 1.5e-19 69.3 0.0 1.7 2 0 0 2 2 2 1 Type IIB DNA topoisomerase Hexapep PF00132.19 gi|154151280|ref|YP_001404898.1| - 8.8e-18 62.9 29.0 2.1e-07 30.1 5.1 4.9 4 1 2 6 6 6 5 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|154151280|ref|YP_001404898.1| - 2.6e-05 23.6 18.3 0.015 14.8 3.7 4.5 4 0 0 4 4 4 3 Hexapeptide repeat of succinyl-transferase Hexapep PF00132.19 gi|154151281|ref|YP_001404899.1| - 1.9e-23 80.8 28.3 6.1e-08 31.8 4.9 5.3 5 0 0 5 5 5 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|154151281|ref|YP_001404899.1| - 8.2e-09 34.8 17.2 0.002 17.6 0.1 5.4 3 2 2 5 5 5 4 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.7 gi|154151281|ref|YP_001404899.1| - 0.17 10.3 2.3 1.7 7.1 0.0 2.7 1 1 2 3 3 3 0 L-fucokinase ACPS PF01648.15 gi|154151282|ref|YP_001404900.1| - 1.6e-16 60.1 0.0 2e-16 59.8 0.0 1.1 1 0 0 1 1 1 1 4'-phosphopantetheinyl transferase superfamily PP-binding PF00550.20 gi|154151283|ref|YP_001404901.1| - 2.2e-10 40.6 0.0 2.6e-10 40.4 0.0 1.1 1 0 0 1 1 1 1 Phosphopantetheine attachment site AMP-binding PF00501.23 gi|154151284|ref|YP_001404902.1| - 1.5e-81 273.9 0.0 1.8e-81 273.7 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.1 gi|154151284|ref|YP_001404902.1| - 1.3e-13 51.7 0.0 3.1e-13 50.4 0.0 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain SBBP PF06739.6 gi|154151284|ref|YP_001404902.1| - 0.057 13.2 0.3 0.54 10.0 0.0 2.5 2 0 0 2 2 2 0 Beta-propeller repeat ATP-synt_F PF01990.12 gi|154151284|ref|YP_001404902.1| - 0.13 12.6 0.1 0.33 11.3 0.1 1.7 1 1 0 1 1 1 0 ATP synthase (F/14-kDa) subunit LuxE PF04443.7 gi|154151285|ref|YP_001404903.1| - 4e-51 173.8 0.0 4.8e-51 173.5 0.0 1.0 1 0 0 1 1 1 1 Acyl-protein synthetase, LuxE AMP-binding PF00501.23 gi|154151285|ref|YP_001404903.1| - 2.9e-06 25.9 0.0 2.3e-05 22.9 0.0 1.9 1 1 0 1 1 1 1 AMP-binding enzyme zf-CSL PF05207.8 gi|154151285|ref|YP_001404903.1| - 0.022 14.2 0.4 1.9 8.0 0.0 2.6 2 0 0 2 2 2 0 CSL zinc finger LuxC PF05893.9 gi|154151286|ref|YP_001404904.1| - 1.1e-74 251.5 0.0 1.3e-74 251.3 0.0 1.1 1 0 0 1 1 1 1 Acyl-CoA reductase (LuxC) adh_short PF00106.20 gi|154151287|ref|YP_001404905.1| - 4.1e-40 137.4 1.6 5.3e-40 137.0 1.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.1 gi|154151287|ref|YP_001404905.1| - 4.3e-29 101.9 1.0 5.4e-29 101.6 0.7 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.5 gi|154151287|ref|YP_001404905.1| - 4.4e-21 75.3 1.3 5.5e-21 75.0 0.9 1.1 1 0 0 1 1 1 1 KR domain Eno-Rase_NADH_b PF12242.3 gi|154151287|ref|YP_001404905.1| - 0.00023 20.8 0.1 0.0047 16.6 0.0 2.5 2 0 0 2 2 2 1 NAD(P)H binding domain of trans-2-enoyl-CoA reductase Shugoshin_N PF07558.6 gi|154151287|ref|YP_001404905.1| - 0.0011 18.6 0.7 0.0022 17.6 0.2 1.7 2 0 0 2 2 2 1 Shugoshin N-terminal coiled-coil region Epimerase PF01370.16 gi|154151287|ref|YP_001404905.1| - 0.0038 16.6 0.4 0.0057 16.1 0.3 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family THF_DHG_CYH_C PF02882.14 gi|154151287|ref|YP_001404905.1| - 0.0067 15.5 0.6 0.14 11.2 0.3 2.3 1 1 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NAD_binding_10 PF13460.1 gi|154151287|ref|YP_001404905.1| - 0.052 13.5 1.0 0.17 11.8 0.7 1.9 1 1 0 1 1 1 0 NADH(P)-binding Glycos_transf_1 PF00534.15 gi|154151288|ref|YP_001404906.1| - 1.8e-35 121.8 0.0 2.8e-35 121.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.1 gi|154151288|ref|YP_001404906.1| - 6e-21 75.0 0.0 1.6e-20 73.6 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.1 gi|154151288|ref|YP_001404906.1| - 1.1e-09 38.5 0.0 2e-09 37.7 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.1 gi|154151288|ref|YP_001404906.1| - 2e-08 34.4 0.0 4.1e-08 33.3 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.1 gi|154151288|ref|YP_001404906.1| - 0.00012 21.9 0.0 0.00025 20.8 0.0 1.7 1 1 0 1 1 1 1 Glycosyl transferase 4-like Glyco_transf_4 PF13439.1 gi|154151288|ref|YP_001404906.1| - 0.00062 19.5 0.0 0.0011 18.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_transf_5 PF08323.6 gi|154151288|ref|YP_001404906.1| - 0.0075 15.7 0.0 0.011 15.2 0.0 1.2 1 0 0 1 1 1 1 Starch synthase catalytic domain DUF2101 PF09874.4 gi|154151288|ref|YP_001404906.1| - 0.072 12.5 0.2 0.11 11.9 0.1 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) Glycos_transf_2 PF00535.21 gi|154151289|ref|YP_001404907.1| - 3.1e-28 98.5 0.2 5e-28 97.8 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|154151289|ref|YP_001404907.1| - 4e-08 33.3 0.0 6.5e-08 32.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|154151289|ref|YP_001404907.1| - 0.00046 20.4 0.1 0.0009 19.5 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.4 gi|154151289|ref|YP_001404907.1| - 0.0023 17.0 0.1 0.0032 16.5 0.1 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_5 PF13712.1 gi|154151289|ref|YP_001404907.1| - 0.029 13.6 0.4 0.12 11.6 0.1 1.9 1 1 1 2 2 2 0 Glycosyltransferase like family CTP_transf_3 PF02348.14 gi|154151289|ref|YP_001404907.1| - 0.08 12.5 0.1 0.12 11.9 0.1 1.3 1 0 0 1 1 1 0 Cytidylyltransferase Glycos_transf_2 PF00535.21 gi|154151290|ref|YP_001404908.1| - 2.9e-23 82.3 0.0 4.2e-23 81.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|154151290|ref|YP_001404908.1| - 3.3e-21 76.1 0.0 4.2e-21 75.7 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.1 gi|154151290|ref|YP_001404908.1| - 7.1e-10 38.9 0.0 9.4e-10 38.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_2 PF10111.4 gi|154151290|ref|YP_001404908.1| - 1.1e-08 34.5 0.0 1.6e-08 33.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.1 gi|154151290|ref|YP_001404908.1| - 1.6e-06 27.5 0.0 2.6e-06 26.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 21 Epimerase PF01370.16 gi|154151291|ref|YP_001404909.1| - 7.8e-67 225.1 0.0 9.5e-67 224.8 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.12 gi|154151291|ref|YP_001404909.1| - 3.4e-14 52.4 0.0 7.7e-14 51.2 0.0 1.5 1 1 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.7 gi|154151291|ref|YP_001404909.1| - 5.3e-13 48.4 0.0 4.3e-10 38.9 0.0 2.2 2 0 0 2 2 2 2 Male sterility protein Polysacc_synt_2 PF02719.10 gi|154151291|ref|YP_001404909.1| - 1.3e-11 43.9 0.0 3.7e-11 42.4 0.0 1.7 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.14 gi|154151291|ref|YP_001404909.1| - 8e-11 41.1 0.0 2.4e-10 39.5 0.0 1.6 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family adh_short PF00106.20 gi|154151291|ref|YP_001404909.1| - 3.4e-05 23.8 0.0 8.1e-05 22.5 0.0 1.5 2 0 0 2 2 2 1 short chain dehydrogenase DUF4222 PF13973.1 gi|154151291|ref|YP_001404909.1| - 0.032 13.6 0.5 0.99 8.8 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4222) KR PF08659.5 gi|154151291|ref|YP_001404909.1| - 0.17 11.5 0.0 0.26 10.9 0.0 1.2 1 0 0 1 1 1 0 KR domain RmlD_sub_bind PF04321.12 gi|154151292|ref|YP_001404910.1| - 3e-88 295.4 0.0 3.4e-88 295.2 0.0 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain Epimerase PF01370.16 gi|154151292|ref|YP_001404910.1| - 8.4e-22 77.7 0.0 1.2e-21 77.2 0.0 1.3 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.7 gi|154151292|ref|YP_001404910.1| - 2.5e-08 33.1 0.0 4.3e-08 32.3 0.0 1.4 1 0 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.10 gi|154151292|ref|YP_001404910.1| - 3.3e-08 32.8 1.6 9.1e-07 28.0 0.1 2.9 2 1 1 3 3 3 2 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.14 gi|154151292|ref|YP_001404910.1| - 0.00099 17.8 0.1 0.0061 15.2 0.0 2.0 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family DapB_N PF01113.15 gi|154151292|ref|YP_001404910.1| - 0.048 13.5 0.1 0.084 12.7 0.0 1.5 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus adh_short PF00106.20 gi|154151292|ref|YP_001404910.1| - 0.055 13.3 0.6 0.52 10.2 0.1 2.2 1 1 1 2 2 2 0 short chain dehydrogenase dTDP_sugar_isom PF00908.12 gi|154151293|ref|YP_001404911.1| - 2.3e-69 232.2 0.0 2.6e-69 232.0 0.0 1.0 1 0 0 1 1 1 1 dTDP-4-dehydrorhamnose 3,5-epimerase NTP_transferase PF00483.18 gi|154151294|ref|YP_001404912.1| - 3e-66 223.2 0.0 3.7e-66 222.9 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.2 gi|154151294|ref|YP_001404912.1| - 1.6e-09 38.0 0.0 2.2e-09 37.6 0.0 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain Glycos_transf_2 PF00535.21 gi|154151295|ref|YP_001404913.1| - 1.8e-23 83.0 0.0 2.5e-23 82.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|154151295|ref|YP_001404913.1| - 3.7e-23 82.5 0.0 5e-23 82.0 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.1 gi|154151295|ref|YP_001404913.1| - 6.7e-11 42.2 0.0 1e-10 41.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_transf_21 PF13506.1 gi|154151295|ref|YP_001404913.1| - 3.5e-08 32.9 0.0 6.4e-08 32.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_2 PF10111.4 gi|154151295|ref|YP_001404913.1| - 1.7e-07 30.5 0.0 8.3e-07 28.3 0.0 1.8 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_N PF04413.11 gi|154151296|ref|YP_001404914.1| - 0.01 15.0 0.0 0.023 13.8 0.0 1.5 1 0 0 1 1 1 0 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Epimerase PF01370.16 gi|154151297|ref|YP_001404915.1| - 9.5e-32 110.3 0.0 1.1e-31 110.0 0.0 1.0 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.12 gi|154151297|ref|YP_001404915.1| - 1.5e-06 27.3 0.0 2.6e-06 26.5 0.0 1.4 1 0 0 1 1 1 1 RmlD substrate binding domain NAD_binding_10 PF13460.1 gi|154151297|ref|YP_001404915.1| - 0.00021 21.3 0.0 0.00032 20.7 0.0 1.3 1 0 0 1 1 1 1 NADH(P)-binding DUF4391 PF14335.1 gi|154151297|ref|YP_001404915.1| - 0.015 14.7 0.0 0.025 13.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4391) Polysacc_synt_2 PF02719.10 gi|154151297|ref|YP_001404915.1| - 0.14 11.0 0.0 0.24 10.2 0.0 1.4 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein Methyltransf_23 PF13489.1 gi|154151298|ref|YP_001404916.1| - 1.2e-10 41.3 0.0 2.8e-10 40.1 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|154151298|ref|YP_001404916.1| - 3.6e-07 30.5 0.0 1.7e-06 28.3 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|154151298|ref|YP_001404916.1| - 2.5e-05 23.8 0.6 0.00088 18.8 0.0 2.6 3 0 0 3 3 3 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|154151298|ref|YP_001404916.1| - 0.00031 21.1 0.0 0.0008 19.8 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Glyco_trans_1_4 PF13692.1 gi|154151298|ref|YP_001404916.1| - 0.0044 17.1 0.0 0.01 15.9 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_56 PF07429.6 gi|154151298|ref|YP_001404916.1| - 0.006 15.5 0.1 0.0092 14.9 0.0 1.2 1 0 0 1 1 1 1 4-alpha-L-fucosyltransferase glycosyl transferase group 56 Methyltransf_14 PF08484.6 gi|154151299|ref|YP_001404917.1| - 4.2e-57 192.1 0.0 6e-57 191.6 0.0 1.2 1 0 0 1 1 1 1 C-methyltransferase C-terminal domain Methyltransf_13 PF08421.6 gi|154151299|ref|YP_001404917.1| - 5.4e-18 64.2 0.1 1.2e-17 63.1 0.1 1.6 1 0 0 1 1 1 1 Putative zinc binding domain Methyltransf_23 PF13489.1 gi|154151299|ref|YP_001404917.1| - 1e-12 48.0 0.0 2.2e-12 46.9 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|154151299|ref|YP_001404917.1| - 0.0059 17.0 0.0 0.015 15.8 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|154151299|ref|YP_001404917.1| - 0.046 13.3 0.0 0.085 12.4 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain DUF4254 PF14063.1 gi|154151300|ref|YP_001404918.1| - 3e-08 33.3 1.1 0.0065 16.0 0.2 2.8 2 1 0 2 2 2 2 Protein of unknown function (DUF4254) Tropomyosin PF00261.15 gi|154151300|ref|YP_001404918.1| - 0.031 13.3 0.2 0.038 13.0 0.2 1.2 1 0 0 1 1 1 0 Tropomyosin ABC_tran PF00005.22 gi|154151301|ref|YP_001404919.1| - 1.2e-23 83.9 0.0 2.5e-23 82.8 0.0 1.6 1 1 0 1 1 1 1 ABC transporter Wzt_C PF14524.1 gi|154151301|ref|YP_001404919.1| - 1.9e-13 50.3 0.0 3.3e-13 49.5 0.0 1.4 1 0 0 1 1 1 1 Wzt C-terminal domain AAA_21 PF13304.1 gi|154151301|ref|YP_001404919.1| - 1.5e-08 35.0 0.4 9.6e-05 22.4 0.3 2.2 1 1 1 2 2 2 2 AAA domain AAA_29 PF13555.1 gi|154151301|ref|YP_001404919.1| - 0.00037 19.9 0.1 0.001 18.5 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.1 gi|154151301|ref|YP_001404919.1| - 0.00047 20.5 0.2 0.00093 19.5 0.0 1.5 2 0 0 2 2 2 1 AAA domain MMR_HSR1 PF01926.18 gi|154151301|ref|YP_001404919.1| - 0.012 15.6 0.3 0.025 14.5 0.2 1.6 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_15 PF13175.1 gi|154151301|ref|YP_001404919.1| - 0.012 14.7 0.0 0.018 14.1 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain AAA_17 PF13207.1 gi|154151301|ref|YP_001404919.1| - 0.022 15.5 0.7 0.048 14.4 0.4 1.6 1 1 0 1 1 1 0 AAA domain DUF258 PF03193.11 gi|154151301|ref|YP_001404919.1| - 0.024 13.8 0.0 0.058 12.5 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function, DUF258 SMC_N PF02463.14 gi|154151301|ref|YP_001404919.1| - 0.096 11.9 0.1 0.3 10.2 0.0 1.8 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain DUF2813 PF11398.3 gi|154151301|ref|YP_001404919.1| - 0.19 10.7 0.0 0.29 10.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2813) AAA_13 PF13166.1 gi|154151301|ref|YP_001404919.1| - 0.24 9.8 0.0 0.37 9.2 0.0 1.1 1 0 0 1 1 1 0 AAA domain ABC2_membrane PF01061.19 gi|154151302|ref|YP_001404920.1| - 2.5e-27 95.4 32.9 3e-27 95.1 18.1 2.0 2 0 0 2 2 2 2 ABC-2 type transporter ABC2_membrane_3 PF12698.2 gi|154151302|ref|YP_001404920.1| - 0.86 8.5 34.7 0.013 14.5 15.8 2.1 1 1 0 2 2 2 0 ABC-2 family transporter protein Epimerase PF01370.16 gi|154151303|ref|YP_001404921.1| - 2e-62 210.7 0.0 2.4e-62 210.4 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.12 gi|154151303|ref|YP_001404921.1| - 3.8e-10 39.1 0.0 5.3e-10 38.6 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain Epimerase_Csub PF13950.1 gi|154151303|ref|YP_001404921.1| - 0.0023 17.8 0.0 0.0051 16.7 0.0 1.5 1 0 0 1 1 1 1 UDP-glucose 4-epimerase C-term subunit adh_short PF00106.20 gi|154151303|ref|YP_001404921.1| - 0.003 17.5 0.0 0.0098 15.8 0.0 1.9 2 0 0 2 2 2 1 short chain dehydrogenase NmrA PF05368.8 gi|154151303|ref|YP_001404921.1| - 0.0054 16.0 0.0 0.0094 15.2 0.0 1.4 1 0 0 1 1 1 1 NmrA-like family Polysacc_synt_2 PF02719.10 gi|154151303|ref|YP_001404921.1| - 0.035 12.9 0.0 0.074 11.9 0.0 1.5 2 0 0 2 2 2 0 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.1 gi|154151303|ref|YP_001404921.1| - 0.045 13.7 0.0 0.11 12.5 0.0 1.6 1 0 0 1 1 1 0 NADH(P)-binding KR PF08659.5 gi|154151303|ref|YP_001404921.1| - 0.051 13.2 0.0 0.091 12.4 0.0 1.5 1 1 0 1 1 1 0 KR domain PMT_2 PF13231.1 gi|154151304|ref|YP_001404922.1| - 0.00047 20.0 16.3 0.00047 20.0 11.3 3.7 2 1 1 3 3 3 1 Dolichyl-phosphate-mannose-protein mannosyltransferase UDPG_MGDP_dh_N PF03721.9 gi|154151305|ref|YP_001404923.1| - 7.2e-60 201.5 0.0 1.1e-59 200.9 0.0 1.2 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.14 gi|154151305|ref|YP_001404923.1| - 5.6e-35 119.4 0.0 9.8e-35 118.6 0.0 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.10 gi|154151305|ref|YP_001404923.1| - 1.3e-25 89.6 0.0 2.7e-25 88.5 0.0 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Pyr_redox PF00070.22 gi|154151305|ref|YP_001404923.1| - 3.4e-06 27.3 0.0 7.8e-06 26.2 0.0 1.7 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase F420_oxidored PF03807.12 gi|154151305|ref|YP_001404923.1| - 9.6e-06 25.9 0.2 0.013 15.9 0.0 3.7 3 1 0 3 3 3 1 NADP oxidoreductase coenzyme F420-dependent NAD_Gly3P_dh_N PF01210.18 gi|154151305|ref|YP_001404923.1| - 0.00015 21.4 0.0 0.00032 20.4 0.0 1.6 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3HCDH_N PF02737.13 gi|154151305|ref|YP_001404923.1| - 0.00029 20.5 0.0 0.00058 19.5 0.0 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.16 gi|154151305|ref|YP_001404923.1| - 0.00066 19.2 0.0 0.0012 18.4 0.0 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain DAO PF01266.19 gi|154151305|ref|YP_001404923.1| - 0.006 15.5 0.5 0.01 14.7 0.3 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.14 gi|154151305|ref|YP_001404923.1| - 0.013 14.5 0.1 0.021 13.8 0.1 1.3 1 0 0 1 1 1 0 FAD binding domain NAD_binding_8 PF13450.1 gi|154151305|ref|YP_001404923.1| - 0.015 15.3 0.1 0.015 15.3 0.1 2.1 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain TrkA_N PF02254.13 gi|154151305|ref|YP_001404923.1| - 0.021 14.7 0.0 0.06 13.3 0.0 1.8 1 0 0 1 1 1 0 TrkA-N domain ApbA PF02558.11 gi|154151305|ref|YP_001404923.1| - 0.022 14.2 0.0 0.045 13.2 0.0 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Pyr_redox_2 PF07992.9 gi|154151305|ref|YP_001404923.1| - 0.076 12.8 0.0 0.12 12.2 0.0 1.5 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase NTP_transferase PF00483.18 gi|154151306|ref|YP_001404924.1| - 5e-25 88.2 0.0 1e-24 87.2 0.0 1.4 1 1 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.2 gi|154151306|ref|YP_001404924.1| - 3.5e-13 49.9 0.0 4.7e-13 49.5 0.0 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.14 gi|154151306|ref|YP_001404924.1| - 0.0034 16.9 0.0 0.0062 16.0 0.0 1.4 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CTP_transf_3 PF02348.14 gi|154151306|ref|YP_001404924.1| - 0.044 13.3 0.0 0.07 12.7 0.0 1.2 1 0 0 1 1 1 0 Cytidylyltransferase Epimerase PF01370.16 gi|154151307|ref|YP_001404925.1| - 1.7e-50 171.6 0.0 2e-50 171.4 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.14 gi|154151307|ref|YP_001404925.1| - 3.8e-14 52.0 0.0 4.9e-14 51.6 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.10 gi|154151307|ref|YP_001404925.1| - 2e-12 46.6 0.0 1.8e-05 23.7 0.0 2.5 2 1 0 2 2 2 2 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.12 gi|154151307|ref|YP_001404925.1| - 1.5e-11 43.7 0.0 2.6e-11 42.9 0.0 1.4 1 1 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.7 gi|154151307|ref|YP_001404925.1| - 4.3e-11 42.2 0.1 7.7e-09 34.8 0.0 2.2 1 1 0 1 1 1 1 Male sterility protein adh_short PF00106.20 gi|154151307|ref|YP_001404925.1| - 0.00039 20.3 0.0 0.0025 17.7 0.0 2.1 1 1 0 1 1 1 1 short chain dehydrogenase NAD_binding_10 PF13460.1 gi|154151307|ref|YP_001404925.1| - 0.0049 16.8 0.0 0.0072 16.3 0.0 1.2 1 0 0 1 1 1 1 NADH(P)-binding NAD_binding_7 PF13241.1 gi|154151307|ref|YP_001404925.1| - 0.034 14.4 0.0 0.21 11.8 0.0 2.4 2 1 0 2 2 2 0 Putative NAD(P)-binding ELFV_dehydrog PF00208.16 gi|154151307|ref|YP_001404925.1| - 0.036 13.6 0.0 0.12 11.9 0.0 1.7 2 0 0 2 2 2 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KR PF08659.5 gi|154151307|ref|YP_001404925.1| - 0.13 11.9 0.0 0.38 10.3 0.0 1.8 2 0 0 2 2 2 0 KR domain Epimerase PF01370.16 gi|154151308|ref|YP_001404926.1| - 5.4e-36 124.2 0.0 7.5e-36 123.7 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.7 gi|154151308|ref|YP_001404926.1| - 5.4e-10 38.6 0.0 2.5e-09 36.4 0.0 1.9 1 1 0 1 1 1 1 Male sterility protein Polysacc_synt_2 PF02719.10 gi|154151308|ref|YP_001404926.1| - 1.4e-08 34.0 0.0 2.8e-07 29.7 0.0 2.0 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.14 gi|154151308|ref|YP_001404926.1| - 1.5e-08 33.6 0.0 2e-08 33.3 0.0 1.4 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.12 gi|154151308|ref|YP_001404926.1| - 2.8e-08 32.9 0.0 9.2e-08 31.3 0.0 1.8 1 1 0 1 1 1 1 RmlD substrate binding domain adh_short PF00106.20 gi|154151308|ref|YP_001404926.1| - 3.4e-05 23.8 0.0 5.8e-05 23.0 0.0 1.4 1 0 0 1 1 1 1 short chain dehydrogenase NAD_binding_10 PF13460.1 gi|154151308|ref|YP_001404926.1| - 0.001 19.1 0.0 0.0065 16.4 0.0 2.2 2 1 0 2 2 2 1 NADH(P)-binding Saccharop_dh PF03435.13 gi|154151308|ref|YP_001404926.1| - 0.0051 15.8 0.0 0.0071 15.3 0.0 1.1 1 0 0 1 1 1 1 Saccharopine dehydrogenase NmrA PF05368.8 gi|154151308|ref|YP_001404926.1| - 0.052 12.8 0.0 0.18 11.0 0.0 1.8 2 0 0 2 2 2 0 NmrA-like family Epimerase PF01370.16 gi|154151309|ref|YP_001404927.1| - 4.3e-36 124.5 0.0 8.1e-36 123.6 0.0 1.4 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.7 gi|154151309|ref|YP_001404927.1| - 2e-10 40.0 0.0 5.4e-09 35.3 0.0 2.1 1 1 0 1 1 1 1 Male sterility protein 3Beta_HSD PF01073.14 gi|154151309|ref|YP_001404927.1| - 1.1e-07 30.8 0.0 1.5e-07 30.3 0.0 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.10 gi|154151309|ref|YP_001404927.1| - 5.3e-06 25.5 0.0 0.00068 18.6 0.0 2.3 2 0 0 2 2 2 2 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.12 gi|154151309|ref|YP_001404927.1| - 7.2e-06 25.0 0.0 0.03 13.2 0.0 2.5 2 1 0 2 2 2 2 RmlD substrate binding domain Epimerase_Csub PF13950.1 gi|154151309|ref|YP_001404927.1| - 1.4e-05 24.9 0.0 3.1e-05 23.8 0.0 1.5 1 0 0 1 1 1 1 UDP-glucose 4-epimerase C-term subunit adh_short PF00106.20 gi|154151309|ref|YP_001404927.1| - 0.0006 19.7 0.0 0.018 14.9 0.0 2.2 2 0 0 2 2 2 1 short chain dehydrogenase KR PF08659.5 gi|154151309|ref|YP_001404927.1| - 0.019 14.6 0.0 0.03 13.9 0.0 1.3 1 0 0 1 1 1 0 KR domain Ldh_1_N PF00056.18 gi|154151309|ref|YP_001404927.1| - 0.031 14.0 0.0 0.05 13.4 0.0 1.3 1 0 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain UPF0104 PF03706.8 gi|154151310|ref|YP_001404928.1| - 1.8e-42 145.6 41.3 2.6e-42 145.0 28.6 1.3 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0104) Glycos_transf_2 PF00535.21 gi|154151310|ref|YP_001404928.1| - 9.2e-27 93.7 0.0 1.4e-26 93.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|154151310|ref|YP_001404928.1| - 1.2e-10 41.5 0.0 1.9e-10 40.9 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Mut7-C PF01927.11 gi|154151312|ref|YP_001404930.1| - 0.0011 18.9 0.0 0.0011 18.9 0.0 1.2 1 0 0 1 1 1 1 Mut7-C RNAse domain DUF433 PF04255.9 gi|154151313|ref|YP_001404931.1| - 2e-25 87.9 0.0 2.5e-25 87.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF433) DUF4258 PF14076.1 gi|154151313|ref|YP_001404931.1| - 0.12 12.3 0.1 0.43 10.6 0.1 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4258) PIN PF01850.16 gi|154151316|ref|YP_001404934.1| - 4.5e-17 62.4 0.0 9.7e-17 61.4 0.0 1.5 1 1 0 1 1 1 1 PIN domain PIN_3 PF13470.1 gi|154151316|ref|YP_001404934.1| - 3.5e-05 24.4 0.1 7.2e-05 23.4 0.0 1.7 1 1 0 1 1 1 1 PIN domain DUF1628 PF07790.6 gi|154151318|ref|YP_001404936.1| - 1.2e-20 74.0 5.7 1.2e-20 74.0 3.9 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF1628) Na_H_antiport_2 PF13726.1 gi|154151318|ref|YP_001404936.1| - 0.028 14.3 2.1 0.044 13.7 1.5 1.4 1 0 0 1 1 1 0 Na+-H+ antiporter family DUF1628 PF07790.6 gi|154151319|ref|YP_001404937.1| - 1.5e-20 73.6 5.3 1.5e-20 73.6 3.7 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF1628) Na_H_antiport_2 PF13726.1 gi|154151319|ref|YP_001404937.1| - 0.032 14.1 1.8 0.05 13.5 1.3 1.4 1 0 0 1 1 1 0 Na+-H+ antiporter family ABC2_membrane PF01061.19 gi|154151320|ref|YP_001404938.1| - 5.7e-13 48.5 28.6 9.7e-13 47.7 19.8 1.4 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.2 gi|154151320|ref|YP_001404938.1| - 0.029 13.4 42.9 0.093 11.7 29.7 1.7 1 1 0 1 1 1 0 ABC-2 family transporter protein ABC_tran PF00005.22 gi|154151321|ref|YP_001404939.1| - 1.8e-26 93.0 0.0 2.9e-26 92.4 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|154151321|ref|YP_001404939.1| - 2e-16 60.7 0.0 1.3e-09 38.5 0.0 2.3 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|154151321|ref|YP_001404939.1| - 6.9e-07 28.7 0.0 0.003 16.8 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_15 PF13175.1 gi|154151321|ref|YP_001404939.1| - 4.7e-05 22.6 0.0 0.16 10.9 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain AAA PF00004.24 gi|154151321|ref|YP_001404939.1| - 0.00027 21.1 0.1 0.002 18.3 0.1 2.5 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.1 gi|154151321|ref|YP_001404939.1| - 0.00081 19.7 0.1 0.0015 18.8 0.1 1.3 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.1 gi|154151321|ref|YP_001404939.1| - 0.001 19.1 0.1 0.003 17.7 0.1 2.0 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|154151321|ref|YP_001404939.1| - 0.001 19.8 0.0 0.0026 18.5 0.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|154151321|ref|YP_001404939.1| - 0.0012 18.3 0.1 0.002 17.6 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain UPF0079 PF02367.12 gi|154151321|ref|YP_001404939.1| - 0.0017 17.9 0.1 0.0035 16.9 0.1 1.4 1 0 0 1 1 1 1 Uncharacterised P-loop hydrolase UPF0079 AAA_5 PF07728.9 gi|154151321|ref|YP_001404939.1| - 0.0037 17.0 0.1 0.033 13.8 0.0 2.3 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_33 PF13671.1 gi|154151321|ref|YP_001404939.1| - 0.0038 17.1 0.1 0.018 14.8 0.1 2.1 1 1 0 1 1 1 1 AAA domain DUF258 PF03193.11 gi|154151321|ref|YP_001404939.1| - 0.0045 16.2 0.0 0.0078 15.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_16 PF13191.1 gi|154151321|ref|YP_001404939.1| - 0.0057 16.6 0.2 0.011 15.6 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_19 PF13245.1 gi|154151321|ref|YP_001404939.1| - 0.0062 16.2 0.1 0.015 15.0 0.0 1.6 1 0 0 1 1 1 1 Part of AAA domain NACHT PF05729.7 gi|154151321|ref|YP_001404939.1| - 0.0076 15.9 0.1 0.017 14.7 0.1 1.5 1 0 0 1 1 1 1 NACHT domain NTPase_1 PF03266.10 gi|154151321|ref|YP_001404939.1| - 0.011 15.4 0.5 0.7 9.5 0.0 2.2 2 0 0 2 2 2 0 NTPase AAA_25 PF13481.1 gi|154151321|ref|YP_001404939.1| - 0.013 14.9 0.1 0.14 11.5 0.0 2.1 2 0 0 2 2 2 0 AAA domain MobB PF03205.9 gi|154151321|ref|YP_001404939.1| - 0.014 15.0 0.4 0.078 12.6 0.1 2.0 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B SRP54 PF00448.17 gi|154151321|ref|YP_001404939.1| - 0.016 14.6 0.0 0.033 13.6 0.0 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_13 PF13166.1 gi|154151321|ref|YP_001404939.1| - 0.02 13.3 0.0 0.03 12.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.1 gi|154151321|ref|YP_001404939.1| - 0.021 14.7 0.1 0.067 13.1 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.1 gi|154151321|ref|YP_001404939.1| - 0.028 14.7 0.0 0.11 12.8 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_14 PF13173.1 gi|154151321|ref|YP_001404939.1| - 0.041 13.7 0.0 0.63 9.9 0.0 2.3 2 0 0 2 2 2 0 AAA domain T2SE PF00437.15 gi|154151321|ref|YP_001404939.1| - 0.046 12.6 0.4 0.076 11.8 0.2 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_30 PF13604.1 gi|154151321|ref|YP_001404939.1| - 0.05 13.1 0.3 0.2 11.2 0.0 1.9 2 1 0 2 2 2 0 AAA domain PduV-EutP PF10662.4 gi|154151321|ref|YP_001404939.1| - 0.055 12.9 0.2 0.21 11.0 0.1 1.9 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation cobW PF02492.14 gi|154151321|ref|YP_001404939.1| - 0.058 12.8 0.1 0.12 11.7 0.0 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_10 PF12846.2 gi|154151321|ref|YP_001404939.1| - 0.067 12.6 0.1 0.29 10.5 0.0 1.9 2 0 0 2 2 2 0 AAA-like domain RNA_helicase PF00910.17 gi|154151321|ref|YP_001404939.1| - 0.083 13.0 0.0 0.15 12.2 0.0 1.4 1 0 0 1 1 1 0 RNA helicase DUF512 PF04459.7 gi|154151322|ref|YP_001404940.1| - 1.7e-21 76.2 0.0 2.2e-21 75.8 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF512) Radical_SAM PF04055.16 gi|154151322|ref|YP_001404940.1| - 2.8e-14 53.6 3.7 3.3e-13 50.1 2.6 2.2 1 1 0 1 1 1 1 Radical SAM superfamily DUF350 PF03994.9 gi|154151323|ref|YP_001404941.1| - 9.9e-23 79.6 23.1 2.2e-12 46.4 2.8 3.4 3 1 1 4 4 4 2 Domain of Unknown Function (DUF350) YwiC PF14256.1 gi|154151323|ref|YP_001404941.1| - 0.0019 18.2 3.3 0.03 14.4 0.4 2.1 1 1 1 2 2 2 1 YwiC-like protein Brr6_like_C_C PF10104.4 gi|154151323|ref|YP_001404941.1| - 0.02 14.4 6.7 0.16 11.4 0.2 2.6 2 1 0 2 2 2 0 Di-sulfide bridge nucleocytoplasmic transport domain Ribosomal_L5_C PF00673.16 gi|154151323|ref|YP_001404941.1| - 0.11 12.2 0.1 0.41 10.4 0.0 1.9 2 0 0 2 2 2 0 ribosomal L5P family C-terminus Per1 PF04080.8 gi|154151323|ref|YP_001404941.1| - 0.22 10.9 0.5 4.2 6.7 0.1 2.0 2 0 0 2 2 2 0 Per1-like DUF2975 PF11188.3 gi|154151323|ref|YP_001404941.1| - 0.28 10.8 15.5 0.81 9.4 1.1 2.5 1 1 0 2 2 2 0 Protein of unknown function (DUF2975) DUF4234 PF14018.1 gi|154151323|ref|YP_001404941.1| - 0.83 9.4 5.9 5.7 6.7 0.2 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF4234) Herpes_UL20 PF04544.7 gi|154151323|ref|YP_001404941.1| - 2.2 8.0 10.1 7.9 6.2 2.5 2.1 2 0 0 2 2 2 0 Herpesvirus egress protein UL20 DUF485 PF04341.7 gi|154151323|ref|YP_001404941.1| - 2.4 7.9 12.6 0.33 10.6 1.8 2.9 2 1 1 3 3 3 0 Protein of unknown function, DUF485 DUF2231 PF09990.4 gi|154151323|ref|YP_001404941.1| - 3.4 8.0 9.7 1.5 9.2 4.4 2.0 1 1 1 2 2 2 0 Predicted membrane protein (DUF2231) Colicin_V PF02674.11 gi|154151323|ref|YP_001404941.1| - 3.5 7.4 19.8 25 4.6 3.3 2.2 1 1 1 2 2 2 0 Colicin V production protein DUF4064 PF13273.1 gi|154151323|ref|YP_001404941.1| - 4.1 7.5 22.6 5.6 7.1 5.4 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF4064) Yip1 PF04893.12 gi|154151323|ref|YP_001404941.1| - 6 6.3 20.7 53 3.2 14.3 2.1 1 1 0 1 1 1 0 Yip1 domain UPF0182 PF03699.8 gi|154151323|ref|YP_001404941.1| - 9.2 4.0 10.2 11 3.8 7.1 1.0 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0182) CPSase_L_D2 PF02786.12 gi|154151324|ref|YP_001404942.1| - 1.8e-76 256.1 0.2 2.7e-76 255.5 0.1 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_chain PF00289.17 gi|154151324|ref|YP_001404942.1| - 4.6e-44 149.0 0.1 1.9e-43 147.0 0.0 2.0 2 0 0 2 2 2 1 Carbamoyl-phosphate synthase L chain, N-terminal domain Biotin_carb_C PF02785.14 gi|154151324|ref|YP_001404942.1| - 3e-38 130.0 0.0 6.5e-38 128.9 0.0 1.6 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain ATPgrasp_Ter PF15632.1 gi|154151324|ref|YP_001404942.1| - 4.2e-15 55.3 0.0 2.2e-14 52.9 0.0 1.9 1 1 0 1 1 1 1 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_4 PF13535.1 gi|154151324|ref|YP_001404942.1| - 2.6e-13 50.1 0.0 5e-13 49.1 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.8 gi|154151324|ref|YP_001404942.1| - 2e-12 46.9 0.0 4.3e-12 45.8 0.0 1.5 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus RimK PF08443.6 gi|154151324|ref|YP_001404942.1| - 9e-08 31.8 0.1 3.9e-07 29.7 0.1 2.0 1 1 0 1 1 1 1 RimK-like ATP-grasp domain ATP-grasp PF02222.17 gi|154151324|ref|YP_001404942.1| - 1.8e-05 24.1 0.0 3.1e-05 23.3 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_3 PF02655.9 gi|154151324|ref|YP_001404942.1| - 0.00013 21.9 0.0 0.00023 21.0 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.14 gi|154151324|ref|YP_001404942.1| - 0.00078 19.0 0.0 0.0013 18.3 0.0 1.3 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PYC_OADA PF02436.13 gi|154151325|ref|YP_001404943.1| - 1.2e-63 214.1 0.1 2e-63 213.3 0.1 1.4 1 0 0 1 1 1 1 Conserved carboxylase domain HMGL-like PF00682.14 gi|154151325|ref|YP_001404943.1| - 5.8e-39 134.1 0.1 8.2e-39 133.6 0.1 1.2 1 0 0 1 1 1 1 HMGL-like Biotin_lipoyl PF00364.17 gi|154151325|ref|YP_001404943.1| - 5.6e-18 64.3 2.0 5.6e-18 64.3 1.4 2.7 3 0 0 3 3 3 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.1 gi|154151325|ref|YP_001404943.1| - 2.1e-13 49.6 0.7 4.4e-06 26.2 0.4 2.5 1 1 1 2 2 2 2 Biotin-lipoyl like HlyD PF00529.15 gi|154151325|ref|YP_001404943.1| - 1e-06 28.3 0.8 0.0068 15.7 0.1 2.5 1 1 1 2 2 2 2 HlyD family secretion protein HlyD_3 PF13437.1 gi|154151325|ref|YP_001404943.1| - 0.0004 20.6 4.5 0.016 15.5 0.1 3.3 4 0 0 4 4 4 1 HlyD family secretion protein GCV_H PF01597.14 gi|154151325|ref|YP_001404943.1| - 0.00054 19.6 0.1 0.0012 18.5 0.1 1.6 1 0 0 1 1 1 1 Glycine cleavage H-protein RnfC_N PF13375.1 gi|154151325|ref|YP_001404943.1| - 0.0034 17.0 1.8 0.0048 16.5 0.3 2.1 2 0 0 2 2 2 1 RnfC Barrel sandwich hybrid domain HlyD_2 PF12700.2 gi|154151325|ref|YP_001404943.1| - 0.016 14.3 0.4 1.5 7.9 0.0 2.4 1 1 1 2 2 2 0 HlyD family secretion protein NQRA PF05896.6 gi|154151325|ref|YP_001404943.1| - 0.016 14.3 0.2 0.032 13.4 0.1 1.5 1 0 0 1 1 1 0 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) PTS_EIIA_1 PF00358.15 gi|154151325|ref|YP_001404943.1| - 0.041 13.4 0.7 3.3 7.2 0.1 2.7 1 1 1 2 2 2 0 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CbiQ PF02361.11 gi|154151326|ref|YP_001404944.1| - 6.1e-06 25.9 3.3 0.078 12.5 0.0 2.3 2 0 0 2 2 2 2 Cobalt transport protein TylF PF05711.6 gi|154151326|ref|YP_001404944.1| - 0.028 13.5 0.0 0.042 12.9 0.0 1.2 1 0 0 1 1 1 0 Macrocin-O-methyltransferase (TylF) HlyIII PF03006.15 gi|154151326|ref|YP_001404944.1| - 0.81 9.0 11.6 0.038 13.3 4.2 1.5 2 0 0 2 2 2 0 Haemolysin-III related O-antigen_lig PF13425.1 gi|154151326|ref|YP_001404944.1| - 3.1 7.7 14.2 0.1 12.5 5.1 1.8 2 0 0 2 2 2 0 O-antigen ligase like membrane protein ABC_tran PF00005.22 gi|154151327|ref|YP_001404945.1| - 5.3e-12 46.2 0.1 2.8e-11 43.8 0.1 1.9 1 1 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|154151327|ref|YP_001404945.1| - 6.8e-05 22.9 0.0 0.0034 17.3 0.0 2.1 2 0 0 2 2 2 1 AAA domain SMC_N PF02463.14 gi|154151327|ref|YP_001404945.1| - 0.0086 15.3 0.0 2.2 7.4 0.0 2.1 1 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 gi|154151327|ref|YP_001404945.1| - 0.012 15.1 0.1 0.021 14.3 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_25 PF13481.1 gi|154151327|ref|YP_001404945.1| - 0.046 13.1 0.1 0.097 12.0 0.0 1.5 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.1 gi|154151327|ref|YP_001404945.1| - 0.11 12.4 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit KaiC PF06745.8 gi|154151327|ref|YP_001404945.1| - 0.13 11.3 0.0 0.2 10.7 0.0 1.3 1 0 0 1 1 1 0 KaiC AAA_22 PF13401.1 gi|154151327|ref|YP_001404945.1| - 0.15 12.2 0.1 0.25 11.5 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA_10 PF12846.2 gi|154151327|ref|YP_001404945.1| - 0.17 11.2 0.1 0.27 10.6 0.1 1.2 1 0 0 1 1 1 0 AAA-like domain ABC_tran PF00005.22 gi|154151328|ref|YP_001404946.1| - 6.9e-19 68.5 0.0 9.4e-19 68.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|154151328|ref|YP_001404946.1| - 1.1e-09 38.7 0.0 1.8e-05 24.8 0.0 2.1 2 0 0 2 2 2 2 AAA domain SMC_N PF02463.14 gi|154151328|ref|YP_001404946.1| - 3.3e-09 36.2 0.0 0.0017 17.6 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.1 gi|154151328|ref|YP_001404946.1| - 0.00015 22.1 0.0 0.00021 21.6 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|154151328|ref|YP_001404946.1| - 0.0011 18.4 0.1 0.0021 17.5 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.1 gi|154151328|ref|YP_001404946.1| - 0.002 18.1 0.1 0.11 12.4 0.1 2.2 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.1 gi|154151328|ref|YP_001404946.1| - 0.0029 17.7 0.1 0.016 15.3 0.1 2.0 1 1 0 1 1 1 1 AAA domain SbcCD_C PF13558.1 gi|154151328|ref|YP_001404946.1| - 0.0057 16.5 0.0 0.021 14.7 0.0 1.9 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_10 PF12846.2 gi|154151328|ref|YP_001404946.1| - 0.033 13.6 0.1 0.26 10.6 0.0 2.0 2 0 0 2 2 2 0 AAA-like domain AAA_15 PF13175.1 gi|154151328|ref|YP_001404946.1| - 0.064 12.2 0.0 0.092 11.7 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain AAA_25 PF13481.1 gi|154151328|ref|YP_001404946.1| - 0.072 12.4 0.0 0.16 11.3 0.0 1.5 2 0 0 2 2 2 0 AAA domain Miro PF08477.8 gi|154151328|ref|YP_001404946.1| - 0.14 12.7 0.0 0.2 12.1 0.0 1.3 1 0 0 1 1 1 0 Miro-like protein Adeno_IVa2 PF02456.10 gi|154151328|ref|YP_001404946.1| - 0.14 10.7 0.0 0.31 9.6 0.0 1.4 2 0 0 2 2 2 0 Adenovirus IVa2 protein ABC_ATPase PF09818.4 gi|154151328|ref|YP_001404946.1| - 0.2 10.1 0.0 0.29 9.6 0.0 1.1 1 0 0 1 1 1 0 Predicted ATPase of the ABC class BioY PF02632.9 gi|154151329|ref|YP_001404947.1| - 1.9e-33 115.1 21.7 2.6e-33 114.7 15.1 1.2 1 0 0 1 1 1 1 BioY family BPL_LplA_LipB PF03099.14 gi|154151330|ref|YP_001404948.1| - 2.4e-18 66.3 0.0 3.6e-18 65.7 0.0 1.3 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family HTH_11 PF08279.7 gi|154151330|ref|YP_001404948.1| - 1.6e-14 53.3 0.0 4.6e-14 51.7 0.0 1.8 1 0 0 1 1 1 1 HTH domain BPL_C PF02237.12 gi|154151330|ref|YP_001404948.1| - 1.2e-09 37.6 0.1 3e-09 36.4 0.1 1.7 1 0 0 1 1 1 1 Biotin protein ligase C terminal domain HTH_24 PF13412.1 gi|154151330|ref|YP_001404948.1| - 0.00091 18.5 0.0 0.0018 17.6 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.2 gi|154151330|ref|YP_001404948.1| - 0.041 13.5 0.0 0.17 11.5 0.0 2.1 2 0 0 2 2 2 0 MarR family HTH_39 PF14090.1 gi|154151330|ref|YP_001404948.1| - 0.043 13.2 0.0 0.086 12.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Fe_dep_repress PF01325.14 gi|154151330|ref|YP_001404948.1| - 0.054 13.4 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain Rrf2 PF02082.15 gi|154151330|ref|YP_001404948.1| - 0.06 13.4 0.0 0.13 12.3 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator L27 PF02828.11 gi|154151330|ref|YP_001404948.1| - 0.082 12.6 0.0 0.3 10.8 0.0 1.8 2 0 0 2 2 2 0 L27 domain DUF2111 PF09884.4 gi|154151331|ref|YP_001404949.1| - 1.7e-38 130.2 1.6 2.3e-38 129.8 1.1 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2111) PAS_4 PF08448.5 gi|154151331|ref|YP_001404949.1| - 0.04 13.9 0.0 0.065 13.2 0.0 1.4 1 0 0 1 1 1 0 PAS fold H_kinase_N PF12282.3 gi|154151331|ref|YP_001404949.1| - 0.086 12.4 0.1 0.1 12.1 0.1 1.2 1 0 0 1 1 1 0 Signal transduction histidine kinase BPL_N PF09825.4 gi|154151332|ref|YP_001404950.1| - 0.0068 15.2 0.2 0.4 9.4 0.0 2.0 2 0 0 2 2 2 2 Biotin-protein ligase, N terminal RtcB PF01139.12 gi|154151333|ref|YP_001404951.1| - 8.6e-148 492.7 0.0 9.6e-148 492.6 0.0 1.0 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB Archease PF01951.11 gi|154151334|ref|YP_001404952.1| - 2.4e-31 108.5 0.0 2.6e-31 108.3 0.0 1.0 1 0 0 1 1 1 1 Archease protein family (MTH1598/TM1083) DUF2551 PF10826.3 gi|154151336|ref|YP_001404954.1| - 3.1e-33 113.5 0.4 3.8e-33 113.2 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2551) Penicillinase_R PF03965.11 gi|154151336|ref|YP_001404954.1| - 0.016 15.3 0.0 0.021 14.8 0.0 1.3 1 0 0 1 1 1 0 Penicillinase repressor SecD_SecF PF02355.11 gi|154151337|ref|YP_001404955.1| - 7.2e-37 126.4 15.2 1.2e-36 125.7 10.6 1.3 1 0 0 1 1 1 1 Protein export membrane protein Sec_GG PF07549.9 gi|154151337|ref|YP_001404955.1| - 0.0016 17.5 0.0 0.0037 16.3 0.0 1.7 1 0 0 1 1 1 1 SecD/SecF GG Motif Patched PF02460.13 gi|154151337|ref|YP_001404955.1| - 4.1 5.1 12.8 5.4 4.7 8.9 1.2 1 0 0 1 1 1 0 Patched family SecD_SecF PF02355.11 gi|154151338|ref|YP_001404956.1| - 6e-16 58.2 12.2 1.4e-15 57.0 8.4 1.5 1 0 0 1 1 1 1 Protein export membrane protein MMPL PF03176.10 gi|154151338|ref|YP_001404956.1| - 3.3e-06 26.0 12.3 6.3e-06 25.1 8.5 1.5 1 0 0 1 1 1 1 MMPL family Thioredoxin PF00085.15 gi|154151339|ref|YP_001404957.1| - 2.1e-25 88.4 0.0 2.4e-25 88.2 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.1 gi|154151339|ref|YP_001404957.1| - 3.8e-13 49.6 0.2 1.5e-12 47.7 0.2 1.7 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.1 gi|154151339|ref|YP_001404957.1| - 2.4e-09 37.1 0.0 2.3e-06 27.6 0.0 2.1 1 1 1 2 2 2 2 Thioredoxin-like Thioredoxin_3 PF13192.1 gi|154151339|ref|YP_001404957.1| - 6.6e-08 32.2 0.1 7.8e-08 32.0 0.1 1.1 1 0 0 1 1 1 1 Thioredoxin domain Redoxin PF08534.5 gi|154151339|ref|YP_001404957.1| - 1.8e-06 27.5 0.2 0.00065 19.2 0.0 2.1 1 1 1 2 2 2 2 Redoxin HyaE PF07449.6 gi|154151339|ref|YP_001404957.1| - 3.5e-06 26.8 0.0 4.1e-06 26.6 0.0 1.1 1 0 0 1 1 1 1 Hydrogenase-1 expression protein HyaE Thioredoxin_9 PF14595.1 gi|154151339|ref|YP_001404957.1| - 4.1e-05 23.1 0.0 4.9e-05 22.8 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin KaiB PF07689.7 gi|154151339|ref|YP_001404957.1| - 0.00015 21.1 0.1 0.00017 21.0 0.1 1.2 1 0 0 1 1 1 1 KaiB domain AhpC-TSA PF00578.16 gi|154151339|ref|YP_001404957.1| - 0.0003 20.4 0.4 0.19 11.3 0.1 2.1 1 1 1 2 2 2 2 AhpC/TSA family DSBA PF01323.15 gi|154151339|ref|YP_001404957.1| - 0.00035 20.2 0.0 0.0028 17.2 0.0 1.8 1 1 1 2 2 2 1 DSBA-like thioredoxin domain Glutaredoxin PF00462.19 gi|154151339|ref|YP_001404957.1| - 0.00057 19.8 0.1 0.00084 19.2 0.0 1.3 1 0 0 1 1 1 1 Glutaredoxin DUF836 PF05768.9 gi|154151339|ref|YP_001404957.1| - 0.0012 19.0 0.0 0.0014 18.8 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) TraF PF13728.1 gi|154151339|ref|YP_001404957.1| - 0.0055 16.2 0.0 0.017 14.6 0.0 1.7 1 1 0 1 1 1 1 F plasmid transfer operon protein Thioredoxin_4 PF13462.1 gi|154151339|ref|YP_001404957.1| - 0.013 15.4 0.1 0.017 15.1 0.0 1.3 1 1 0 1 1 1 0 Thioredoxin Thioredoxin_7 PF13899.1 gi|154151339|ref|YP_001404957.1| - 0.021 14.8 0.1 0.041 13.8 0.0 1.5 1 1 0 1 1 1 0 Thioredoxin-like TrbC_Ftype PF09673.5 gi|154151339|ref|YP_001404957.1| - 0.024 14.2 0.0 0.027 14.0 0.0 1.1 1 0 0 1 1 1 0 Type-F conjugative transfer system pilin assembly protein ABC_transp_aux PF09822.4 gi|154151339|ref|YP_001404957.1| - 0.14 11.6 0.0 0.17 11.3 0.0 1.1 1 0 0 1 1 1 0 ABC-type uncharacterized transport system DUF953 PF06110.6 gi|154151339|ref|YP_001404957.1| - 0.16 11.3 0.3 0.54 9.7 0.2 1.8 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) F420_oxidored PF03807.12 gi|154151340|ref|YP_001404958.1| - 1.7e-18 66.8 0.0 3.3e-18 65.9 0.0 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Semialdhyde_dh PF01118.19 gi|154151340|ref|YP_001404958.1| - 0.00032 21.0 0.1 0.00069 19.9 0.0 1.6 1 1 1 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain PDH PF02153.12 gi|154151340|ref|YP_001404958.1| - 0.0058 15.5 0.0 0.0089 14.9 0.0 1.3 1 0 0 1 1 1 1 Prephenate dehydrogenase NAD_binding_2 PF03446.10 gi|154151340|ref|YP_001404958.1| - 0.0081 16.0 0.1 0.029 14.2 0.0 1.8 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_Gly3P_dh_N PF01210.18 gi|154151340|ref|YP_001404958.1| - 0.018 14.7 0.0 0.025 14.3 0.0 1.4 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Saccharop_dh PF03435.13 gi|154151340|ref|YP_001404958.1| - 0.089 11.7 0.1 0.12 11.3 0.1 1.2 1 0 0 1 1 1 0 Saccharopine dehydrogenase adh_short PF00106.20 gi|154151340|ref|YP_001404958.1| - 0.13 12.1 0.2 0.26 11.2 0.0 1.5 2 0 0 2 2 2 0 short chain dehydrogenase HhH-GPD PF00730.20 gi|154151341|ref|YP_001404959.1| - 1e-10 41.8 0.0 1.5e-10 41.3 0.0 1.3 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.18 gi|154151341|ref|YP_001404959.1| - 0.0003 20.3 0.4 0.00077 19.0 0.0 1.9 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_5 PF14520.1 gi|154151341|ref|YP_001404959.1| - 0.00076 19.5 1.3 0.0092 16.1 0.8 2.4 1 1 1 2 2 2 2 Helix-hairpin-helix domain DUF1431 PF07248.7 gi|154151341|ref|YP_001404959.1| - 0.079 12.9 0.7 0.91 9.5 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1431) Aldolase_II PF00596.16 gi|154151342|ref|YP_001404960.1| - 3.5e-33 114.7 0.0 4.2e-33 114.4 0.0 1.0 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain Glycos_transf_2 PF00535.21 gi|154151343|ref|YP_001404961.1| - 2.7e-16 59.7 0.0 5.1e-16 58.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|154151343|ref|YP_001404961.1| - 4.2e-06 26.7 0.0 7.3e-06 25.9 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.1 gi|154151343|ref|YP_001404961.1| - 0.078 13.3 0.0 0.15 12.3 0.0 1.6 1 1 0 1 1 1 0 Glycosyl transferase family 2 DUF751 PF05421.6 gi|154151343|ref|YP_001404961.1| - 0.2 11.9 5.5 0.49 10.7 3.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF751) DUF99 PF01949.11 gi|154151344|ref|YP_001404962.1| - 6.9e-65 217.6 0.0 7.9e-65 217.4 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF99 Rubredoxin PF00301.15 gi|154151345|ref|YP_001404963.1| - 6.4e-19 67.5 3.8 8e-19 67.2 2.7 1.1 1 0 0 1 1 1 1 Rubredoxin zf-Sec23_Sec24 PF04810.10 gi|154151345|ref|YP_001404963.1| - 0.00059 19.3 0.9 0.032 13.7 0.0 2.2 2 0 0 2 2 2 1 Sec23/Sec24 zinc finger PHD PF00628.24 gi|154151345|ref|YP_001404963.1| - 0.0073 15.9 1.5 1.5 8.5 0.0 2.1 2 0 0 2 2 2 2 PHD-finger zf-MIZ PF02891.15 gi|154151345|ref|YP_001404963.1| - 0.025 14.0 3.8 0.15 11.5 0.3 2.1 2 0 0 2 2 2 0 MIZ/SP-RING zinc finger zf-UBP PF02148.14 gi|154151345|ref|YP_001404963.1| - 0.059 13.4 0.3 0.62 10.2 0.0 2.0 2 0 0 2 2 2 0 Zn-finger in ubiquitin-hydrolases and other protein DUF2296 PF10058.4 gi|154151345|ref|YP_001404963.1| - 0.15 11.7 1.6 5.1 6.9 0.1 2.1 2 0 0 2 2 2 0 Predicted integral membrane metal-binding protein (DUF2296) zf-RanBP PF00641.13 gi|154151345|ref|YP_001404963.1| - 0.2 10.8 3.4 1.3 8.2 0.1 2.1 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others PAS_9 PF13426.1 gi|154151347|ref|YP_001404965.1| - 2.6e-31 108.0 0.0 1.4e-10 41.4 0.0 3.5 3 0 0 3 3 3 3 PAS domain HisKA_2 PF07568.7 gi|154151347|ref|YP_001404965.1| - 9.9e-28 95.8 1.7 3.1e-27 94.2 1.2 2.0 1 0 0 1 1 1 1 Histidine kinase PAS PF00989.19 gi|154151347|ref|YP_001404965.1| - 2.3e-18 66.0 0.0 5.6e-06 26.1 0.0 3.5 3 0 0 3 3 3 3 PAS fold PAS_4 PF08448.5 gi|154151347|ref|YP_001404965.1| - 1.7e-17 63.4 0.0 1.2e-06 28.5 0.0 3.4 3 0 0 3 3 3 3 PAS fold PAS_3 PF08447.6 gi|154151347|ref|YP_001404965.1| - 1.2e-15 57.3 1.8 9.6e-14 51.2 0.0 4.0 4 1 0 4 4 4 1 PAS fold PAS_8 PF13188.1 gi|154151347|ref|YP_001404965.1| - 1.1e-13 50.4 0.1 0.0011 18.7 0.0 3.5 3 0 0 3 3 3 3 PAS domain HATPase_c PF02518.21 gi|154151347|ref|YP_001404965.1| - 1.4e-09 37.6 0.0 4.1e-09 36.1 0.0 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HWE_HK PF07536.9 gi|154151347|ref|YP_001404965.1| - 0.00011 22.6 0.2 0.00027 21.2 0.1 1.8 1 0 0 1 1 1 1 HWE histidine kinase HATPase_c_2 PF13581.1 gi|154151347|ref|YP_001404965.1| - 0.019 14.7 0.0 0.039 13.7 0.0 1.6 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain SPOB_a PF14689.1 gi|154151347|ref|YP_001404965.1| - 0.72 9.4 4.5 0.47 10.0 0.1 2.5 3 0 0 3 3 3 0 Sensor_kinase_SpoOB-type, alpha-helical domain Response_reg PF00072.19 gi|154151348|ref|YP_001404966.1| - 1.3e-23 83.1 0.2 2.6e-23 82.1 0.1 1.5 1 0 0 1 1 1 1 Response regulator receiver domain PAS PF00989.19 gi|154151348|ref|YP_001404966.1| - 1.2e-07 31.4 0.0 6.5e-07 29.1 0.0 2.1 2 0 0 2 2 2 1 PAS fold PAS_9 PF13426.1 gi|154151348|ref|YP_001404966.1| - 1.6e-05 25.2 0.0 2.8e-05 24.4 0.0 1.5 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.5 gi|154151348|ref|YP_001404966.1| - 0.0036 17.3 0.0 0.0072 16.3 0.0 1.5 1 0 0 1 1 1 1 PAS fold PAS_8 PF13188.1 gi|154151348|ref|YP_001404966.1| - 0.004 16.9 0.0 0.008 16.0 0.0 1.5 1 0 0 1 1 1 1 PAS domain FleQ PF06490.6 gi|154151348|ref|YP_001404966.1| - 0.12 12.5 0.0 0.18 11.9 0.0 1.3 1 0 0 1 1 1 0 Flagellar regulatory protein FleQ PAS PF00989.19 gi|154151349|ref|YP_001404967.1| - 1.3e-42 144.1 0.0 3.2e-17 62.3 0.0 3.6 3 0 0 3 3 3 3 PAS fold PAS_9 PF13426.1 gi|154151349|ref|YP_001404967.1| - 1.2e-34 118.8 0.0 2e-15 57.0 0.0 3.5 3 0 0 3 3 3 3 PAS domain PAS_4 PF08448.5 gi|154151349|ref|YP_001404967.1| - 1.6e-32 111.7 0.0 1.7e-12 47.3 0.0 3.3 3 0 0 3 3 3 3 PAS fold PAS_3 PF08447.6 gi|154151349|ref|YP_001404967.1| - 2.2e-24 85.3 0.0 2.4e-12 46.7 0.0 3.5 3 0 0 3 3 3 3 PAS fold PAS_8 PF13188.1 gi|154151349|ref|YP_001404967.1| - 1.1e-19 69.5 0.2 1e-07 31.5 0.0 4.0 3 0 0 3 3 3 3 PAS domain Response_reg PF00072.19 gi|154151349|ref|YP_001404967.1| - 3.8e-19 68.7 0.0 7.8e-19 67.7 0.0 1.6 1 0 0 1 1 1 1 Response regulator receiver domain PAS_7 PF12860.2 gi|154151349|ref|YP_001404967.1| - 5.4e-06 26.4 0.7 0.016 15.2 0.0 4.8 4 2 0 4 4 4 1 PAS fold PAS_10 PF13596.1 gi|154151349|ref|YP_001404967.1| - 0.00058 20.1 0.0 0.087 13.1 0.0 2.8 3 0 0 3 3 3 1 PAS domain PAS_11 PF14598.1 gi|154151349|ref|YP_001404967.1| - 0.0096 15.8 0.0 0.17 11.8 0.0 2.7 2 1 0 2 2 2 1 PAS domain HisKA PF00512.20 gi|154151349|ref|YP_001404967.1| - 0.076 13.0 0.2 0.076 13.0 0.1 3.4 3 1 1 4 4 4 0 His Kinase A (phospho-acceptor) domain PAS_9 PF13426.1 gi|154151350|ref|YP_001404968.1| - 5.1e-35 119.9 0.2 1.9e-11 44.2 0.0 4.9 5 0 0 5 5 4 3 PAS domain PAS_4 PF08448.5 gi|154151350|ref|YP_001404968.1| - 1.3e-29 102.4 0.0 3.2e-12 46.4 0.1 4.7 4 0 0 4 4 4 4 PAS fold PAS_8 PF13188.1 gi|154151350|ref|YP_001404968.1| - 3.8e-19 67.8 0.2 0.00014 21.6 0.0 4.9 4 0 0 4 4 4 3 PAS domain PAS PF00989.19 gi|154151350|ref|YP_001404968.1| - 2.5e-17 62.6 0.0 0.00035 20.3 0.0 5.2 5 0 0 5 5 5 3 PAS fold PAS_3 PF08447.6 gi|154151350|ref|YP_001404968.1| - 1.3e-08 34.8 1.2 0.00066 19.7 0.0 4.2 4 0 0 4 4 3 1 PAS fold PAS_10 PF13596.1 gi|154151350|ref|YP_001404968.1| - 1.5e-05 25.2 0.1 0.031 14.5 0.0 3.1 3 0 0 3 3 2 1 PAS domain PAS_7 PF12860.2 gi|154151350|ref|YP_001404968.1| - 0.00087 19.2 2.7 4.9 7.1 0.0 4.7 4 3 1 5 5 4 2 PAS fold DUF3552 PF12072.3 gi|154151350|ref|YP_001404968.1| - 0.027 13.6 23.0 0.39 9.8 7.5 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF3552) 4HB_MCP_1 PF12729.2 gi|154151350|ref|YP_001404968.1| - 0.052 12.8 9.0 0.18 11.1 0.4 3.4 3 0 0 3 3 3 0 Four helix bundle sensory module for signal transduction LXG PF04740.7 gi|154151350|ref|YP_001404968.1| - 0.067 12.9 5.7 2 8.1 0.1 2.7 3 0 0 3 3 3 0 LXG domain of WXG superfamily Atg14 PF10186.4 gi|154151350|ref|YP_001404968.1| - 0.08 11.8 7.8 0.86 8.4 0.2 2.2 2 0 0 2 2 2 0 UV radiation resistance protein and autophagy-related subunit 14 Scaffolding_pro PF11418.3 gi|154151350|ref|YP_001404968.1| - 0.16 12.3 11.2 1.4 9.3 1.7 2.6 2 0 0 2 2 2 0 Phi29 scaffolding protein DUF2959 PF11172.3 gi|154151350|ref|YP_001404968.1| - 0.3 10.8 8.3 16 5.1 0.9 4.0 4 0 0 4 4 4 0 Protein of unknown function (DUF2959) APG6 PF04111.7 gi|154151350|ref|YP_001404968.1| - 0.34 9.9 13.3 0.17 10.8 2.2 2.4 2 0 0 2 2 2 0 Autophagy protein Apg6 DUF972 PF06156.8 gi|154151350|ref|YP_001404968.1| - 0.43 10.9 11.7 0.52 10.6 1.7 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF972) HALZ PF02183.13 gi|154151350|ref|YP_001404968.1| - 0.48 10.1 14.0 1.3 8.8 1.4 3.4 2 2 1 3 3 3 0 Homeobox associated leucine zipper Spc7 PF08317.6 gi|154151350|ref|YP_001404968.1| - 0.59 8.7 9.5 2.5 6.6 1.4 2.2 2 0 0 2 2 2 0 Spc7 kinetochore protein YcbB PF08664.5 gi|154151350|ref|YP_001404968.1| - 0.66 9.7 4.5 0.85 9.4 0.5 2.4 2 0 0 2 2 2 0 YcbB domain MbeB_N PF04837.7 gi|154151350|ref|YP_001404968.1| - 1.2 9.2 7.7 0.91 9.6 1.9 2.8 2 0 0 2 2 2 0 MbeB-like, N-term conserved region E2R135 PF11570.3 gi|154151350|ref|YP_001404968.1| - 1.3 9.1 6.0 2.7 8.0 0.1 2.4 2 0 0 2 2 2 0 Coiled-coil receptor-binding R-domain of colicin E2 Ax_dynein_light PF10211.4 gi|154151350|ref|YP_001404968.1| - 2 8.1 16.4 1.9 8.2 4.7 2.4 2 0 0 2 2 2 0 Axonemal dynein light chain V_ATPase_I PF01496.14 gi|154151350|ref|YP_001404968.1| - 2.3 5.9 5.4 0.75 7.5 0.3 2.1 2 0 0 2 2 2 0 V-type ATPase 116kDa subunit family Syntaxin-6_N PF09177.6 gi|154151350|ref|YP_001404968.1| - 2.7 8.4 8.5 5.7 7.4 0.9 2.6 2 0 0 2 2 2 0 Syntaxin 6, N-terminal DUF342 PF03961.8 gi|154151350|ref|YP_001404968.1| - 2.9 6.2 3.9 18 3.6 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF342) PEP-utilisers_N PF05524.8 gi|154151350|ref|YP_001404968.1| - 3 7.6 15.4 0.7 9.6 0.0 4.1 4 0 0 4 4 4 0 PEP-utilising enzyme, N-terminal DUF1265 PF06887.9 gi|154151350|ref|YP_001404968.1| - 5.2 6.8 6.0 68 3.2 0.0 3.5 2 1 1 3 3 3 0 Protein of unknown function (DUF1265) ADIP PF11559.3 gi|154151350|ref|YP_001404968.1| - 6.5 6.6 18.0 3.8 7.3 1.4 2.5 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding HATPase_c PF02518.21 gi|154151351|ref|YP_001404969.1| - 2.6e-23 81.8 0.1 4.3e-23 81.1 0.1 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_4 PF08448.5 gi|154151351|ref|YP_001404969.1| - 2.2e-21 75.9 0.0 4.2e-13 49.2 0.0 2.3 2 0 0 2 2 2 2 PAS fold PAS_9 PF13426.1 gi|154151351|ref|YP_001404969.1| - 4e-21 75.3 0.0 2.9e-09 37.2 0.0 2.5 2 0 0 2 2 2 2 PAS domain HisKA PF00512.20 gi|154151351|ref|YP_001404969.1| - 5.3e-12 45.5 1.7 7.9e-12 45.0 0.2 2.1 2 0 0 2 2 2 1 His Kinase A (phospho-acceptor) domain PAS PF00989.19 gi|154151351|ref|YP_001404969.1| - 6.4e-10 38.8 0.0 0.00017 21.3 0.0 2.7 2 0 0 2 2 2 2 PAS fold PAS_8 PF13188.1 gi|154151351|ref|YP_001404969.1| - 9.5e-07 28.4 0.0 0.0057 16.4 0.0 3.2 3 0 0 3 3 3 2 PAS domain HATPase_c_5 PF14501.1 gi|154151351|ref|YP_001404969.1| - 6.8e-06 25.7 0.0 1.5e-05 24.6 0.0 1.5 1 0 0 1 1 1 1 GHKL domain HATPase_c_3 PF13589.1 gi|154151351|ref|YP_001404969.1| - 0.0026 17.3 0.0 0.0064 16.1 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.19 gi|154151352|ref|YP_001404970.1| - 9.9e-23 80.2 0.0 1.3e-22 79.9 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain PAS_9 PF13426.1 gi|154151353|ref|YP_001404971.1| - 1.6e-105 346.5 0.0 4.1e-17 62.4 0.0 8.6 8 0 0 8 8 8 8 PAS domain PAS_4 PF08448.5 gi|154151353|ref|YP_001404971.1| - 7.4e-91 299.5 0.0 1.6e-20 73.1 0.0 8.8 8 1 1 9 9 9 8 PAS fold PAS PF00989.19 gi|154151353|ref|YP_001404971.1| - 1.5e-88 292.1 0.0 1.1e-13 51.0 0.0 8.4 8 0 0 8 8 8 8 PAS fold PAS_3 PF08447.6 gi|154151353|ref|YP_001404971.1| - 4.2e-56 187.0 0.0 4.8e-15 55.4 0.0 8.9 8 1 0 8 8 8 7 PAS fold PAS_8 PF13188.1 gi|154151353|ref|YP_001404971.1| - 2.9e-44 147.4 0.4 2e-07 30.5 0.0 9.3 8 1 1 9 9 9 8 PAS domain HisKA_2 PF07568.7 gi|154151353|ref|YP_001404971.1| - 2.4e-27 94.5 1.6 2.4e-27 94.5 1.1 3.2 4 0 0 4 4 3 1 Histidine kinase PAS_10 PF13596.1 gi|154151353|ref|YP_001404971.1| - 2.5e-15 56.6 0.0 9.6e-06 25.8 0.0 6.3 7 0 0 7 7 6 3 PAS domain PAS_11 PF14598.1 gi|154151353|ref|YP_001404971.1| - 3.7e-14 52.6 0.0 0.00025 20.9 0.0 6.5 6 0 0 6 6 6 3 PAS domain HATPase_c PF02518.21 gi|154151353|ref|YP_001404971.1| - 8.1e-12 44.8 0.1 1.7e-11 43.8 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Response_reg PF00072.19 gi|154151353|ref|YP_001404971.1| - 5.7e-10 39.2 0.0 1.7e-09 37.7 0.0 1.8 1 0 0 1 1 1 1 Response regulator receiver domain PAS_7 PF12860.2 gi|154151353|ref|YP_001404971.1| - 3.3e-09 36.7 0.4 0.0048 16.8 0.0 7.5 8 1 0 8 8 8 1 PAS fold HWE_HK PF07536.9 gi|154151353|ref|YP_001404971.1| - 2.4e-05 24.6 0.1 8.3e-05 22.9 0.1 2.0 1 0 0 1 1 1 1 HWE histidine kinase HATPase_c_2 PF13581.1 gi|154151353|ref|YP_001404971.1| - 6.5e-05 22.7 0.0 0.00014 21.6 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain Response_reg PF00072.19 gi|154151354|ref|YP_001404972.1| - 1.6e-23 82.8 0.0 2.3e-23 82.3 0.0 1.3 1 0 0 1 1 1 1 Response regulator receiver domain GAF PF01590.21 gi|154151354|ref|YP_001404972.1| - 0.0036 17.4 0.0 0.009 16.1 0.0 1.7 1 1 0 1 1 1 1 GAF domain GAF_3 PF13492.1 gi|154151354|ref|YP_001404972.1| - 0.0045 17.0 0.0 0.014 15.4 0.0 1.8 1 1 0 1 1 1 1 GAF domain Response_reg PF00072.19 gi|154151355|ref|YP_001404973.1| - 2.1e-13 50.2 0.0 2.5e-13 50.0 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain FleQ PF06490.6 gi|154151355|ref|YP_001404973.1| - 0.035 14.2 0.0 0.046 13.8 0.0 1.3 1 0 0 1 1 1 0 Flagellar regulatory protein FleQ HMGL-like PF00682.14 gi|154151356|ref|YP_001404974.1| - 2.2e-75 253.3 2.1 5e-75 252.2 1.5 1.6 1 0 0 1 1 1 1 HMGL-like LeuA_dimer PF08502.5 gi|154151356|ref|YP_001404974.1| - 1.4e-30 105.7 1.2 2.6e-30 104.9 0.8 1.5 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain YesK PF14150.1 gi|154151357|ref|YP_001404975.1| - 0.0002 21.4 1.2 0.00027 20.9 0.8 1.2 1 0 0 1 1 1 1 YesK-like protein Cyt_c_ox_IV PF12270.3 gi|154151357|ref|YP_001404975.1| - 0.00048 19.8 0.2 0.00062 19.5 0.1 1.2 1 0 0 1 1 1 1 Cytochrome c oxidase subunit IV IncA PF04156.9 gi|154151357|ref|YP_001404975.1| - 0.00049 19.7 0.0 0.00056 19.5 0.0 1.0 1 0 0 1 1 1 1 IncA protein DUF3169 PF11368.3 gi|154151357|ref|YP_001404975.1| - 0.012 14.8 0.6 0.016 14.4 0.2 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF3169) Ycf1 PF05758.7 gi|154151357|ref|YP_001404975.1| - 0.034 11.8 0.6 0.03 12.0 0.4 1.1 1 0 0 1 1 1 0 Ycf1 BSP_II PF05432.6 gi|154151357|ref|YP_001404975.1| - 0.035 13.3 14.8 0.046 12.9 10.2 1.2 1 0 0 1 1 1 0 Bone sialoprotein II (BSP-II) Sigma70_ner PF04546.8 gi|154151357|ref|YP_001404975.1| - 0.039 13.5 15.8 0.051 13.1 10.9 1.1 1 0 0 1 1 1 0 Sigma-70, non-essential region CobT PF06213.7 gi|154151357|ref|YP_001404975.1| - 0.05 12.7 15.9 0.059 12.4 11.0 1.1 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT Claudin_2 PF13903.1 gi|154151357|ref|YP_001404975.1| - 0.059 13.0 0.0 0.067 12.8 0.0 1.1 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction GPDPase_memb PF10110.4 gi|154151357|ref|YP_001404975.1| - 0.07 12.5 0.7 0.081 12.3 0.5 1.1 1 0 0 1 1 1 0 Membrane domain of glycerophosphoryl diester phosphodiesterase Serinc PF03348.10 gi|154151357|ref|YP_001404975.1| - 0.078 11.6 1.5 0.15 10.7 1.1 1.5 1 1 0 1 1 1 0 Serine incorporator (Serinc) DUF3311 PF11755.3 gi|154151357|ref|YP_001404975.1| - 0.083 12.4 0.2 0.4 10.2 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3311) DUF4366 PF14283.1 gi|154151357|ref|YP_001404975.1| - 0.11 11.9 9.7 0.052 12.9 5.1 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4366) Prog_receptor PF02161.10 gi|154151357|ref|YP_001404975.1| - 0.12 11.1 3.3 0.14 10.9 2.3 1.0 1 0 0 1 1 1 0 Progesterone receptor SpoIIIAH PF12685.2 gi|154151357|ref|YP_001404975.1| - 0.16 11.4 8.5 0.021 14.3 3.2 1.5 2 0 0 2 2 1 0 SpoIIIAH-like protein Nucleoplasmin PF03066.10 gi|154151357|ref|YP_001404975.1| - 0.16 11.4 22.2 0.23 10.9 15.4 1.1 1 0 0 1 1 1 0 Nucleoplasmin Voldacs PF03517.8 gi|154151357|ref|YP_001404975.1| - 0.17 11.7 5.9 0.23 11.3 4.1 1.2 1 0 0 1 1 1 0 Regulator of volume decrease after cellular swelling CENP-B_dimeris PF09026.5 gi|154151357|ref|YP_001404975.1| - 0.24 11.6 20.0 0.39 10.9 13.9 1.4 1 0 0 1 1 1 0 Centromere protein B dimerisation domain Sporozoite_P67 PF05642.6 gi|154151357|ref|YP_001404975.1| - 0.28 8.9 9.1 0.33 8.7 6.3 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Rhabdo_ncap PF00945.13 gi|154151357|ref|YP_001404975.1| - 0.32 9.5 2.2 0.39 9.2 1.5 1.1 1 0 0 1 1 1 0 Rhabdovirus nucleocapsid protein DUF1469 PF07332.6 gi|154151357|ref|YP_001404975.1| - 0.39 10.4 5.1 0.57 9.9 3.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1469) RXT2_N PF08595.6 gi|154151357|ref|YP_001404975.1| - 0.41 10.4 9.6 0.59 9.9 6.6 1.2 1 0 0 1 1 1 0 RXT2-like, N-terminal Mem_trans PF03547.13 gi|154151357|ref|YP_001404975.1| - 0.58 8.3 2.9 0.8 7.9 2.0 1.4 1 1 0 1 1 1 0 Membrane transport protein CDC45 PF02724.9 gi|154151357|ref|YP_001404975.1| - 0.74 7.7 11.2 0.83 7.6 7.8 1.1 1 0 0 1 1 1 0 CDC45-like protein NOA36 PF06524.7 gi|154151357|ref|YP_001404975.1| - 1.1 8.4 11.7 1.4 8.1 8.1 1.1 1 0 0 1 1 1 0 NOA36 protein SHR3_chaperone PF08229.6 gi|154151357|ref|YP_001404975.1| - 1.7 7.5 5.0 0.61 9.0 1.6 1.5 1 1 1 2 2 2 0 ER membrane protein SH3 Vfa1 PF08432.5 gi|154151357|ref|YP_001404975.1| - 2.9 7.8 11.5 3.6 7.5 8.0 1.1 1 0 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 Dicty_REP PF05086.7 gi|154151357|ref|YP_001404975.1| - 3.1 5.4 11.0 3.7 5.1 7.6 1.1 1 0 0 1 1 1 0 Dictyostelium (Slime Mold) REP protein Bap31 PF05529.7 gi|154151357|ref|YP_001404975.1| - 3.2 7.1 6.4 5.7 6.3 4.4 1.3 1 0 0 1 1 1 0 B-cell receptor-associated protein 31-like HSP90 PF00183.13 gi|154151357|ref|YP_001404975.1| - 4.3 5.6 17.9 5 5.3 12.4 1.0 1 0 0 1 1 1 0 Hsp90 protein YqfQ PF14181.1 gi|154151357|ref|YP_001404975.1| - 6.1 6.8 11.5 7.6 6.5 8.0 1.1 1 0 0 1 1 1 0 YqfQ-like protein VID27 PF08553.5 gi|154151357|ref|YP_001404975.1| - 6.4 4.8 15.0 7.1 4.7 10.4 1.1 1 0 0 1 1 1 0 VID27 cytoplasmic protein FAM176 PF14851.1 gi|154151357|ref|YP_001404975.1| - 7.4 6.2 11.8 6.6 6.3 7.6 1.4 1 1 0 1 1 1 0 FAM176 family Prefoldin_2 PF01920.15 gi|154151358|ref|YP_001404976.1| - 5.8e-22 77.4 14.4 7e-22 77.2 10.0 1.1 1 0 0 1 1 1 1 Prefoldin subunit MAD PF05557.8 gi|154151358|ref|YP_001404976.1| - 0.0058 14.7 6.3 0.0072 14.4 4.4 1.1 1 0 0 1 1 1 1 Mitotic checkpoint protein MCPsignal PF00015.16 gi|154151358|ref|YP_001404976.1| - 0.0066 16.0 1.6 0.011 15.2 1.1 1.3 1 0 0 1 1 1 1 Methyl-accepting chemotaxis protein (MCP) signalling domain Sipho_Gp157 PF05565.6 gi|154151358|ref|YP_001404976.1| - 0.009 15.6 9.1 0.34 10.4 1.1 2.1 1 1 0 2 2 2 2 Siphovirus Gp157 DUF1054 PF06335.7 gi|154151358|ref|YP_001404976.1| - 0.017 14.8 0.6 1.5 8.4 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1054) IncA PF04156.9 gi|154151358|ref|YP_001404976.1| - 0.023 14.3 7.5 0.073 12.6 0.5 2.1 2 0 0 2 2 2 0 IncA protein DUF724 PF05266.9 gi|154151358|ref|YP_001404976.1| - 0.038 13.6 5.6 0.051 13.1 3.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) ERp29 PF07749.7 gi|154151358|ref|YP_001404976.1| - 0.039 14.5 4.4 0.069 13.7 2.8 1.7 1 1 0 1 1 1 0 Endoplasmic reticulum protein ERp29, C-terminal domain Laminin_II PF06009.7 gi|154151358|ref|YP_001404976.1| - 0.062 13.0 11.0 0.19 11.5 6.7 1.9 1 1 1 2 2 2 0 Laminin Domain II Nup54 PF13874.1 gi|154151358|ref|YP_001404976.1| - 0.072 12.7 6.1 0.076 12.6 0.2 2.1 2 0 0 2 2 2 0 Nucleoporin complex subunit 54 DUF3280 PF11684.3 gi|154151358|ref|YP_001404976.1| - 0.12 12.6 1.6 0.39 10.9 0.6 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2380) Pet127 PF08634.5 gi|154151358|ref|YP_001404976.1| - 0.13 11.4 1.1 0.14 11.2 0.7 1.1 1 0 0 1 1 1 0 Mitochondrial protein Pet127 DUF4510 PF14971.1 gi|154151358|ref|YP_001404976.1| - 0.14 12.3 3.7 1.3 9.1 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4510) HrpB7 PF09486.5 gi|154151358|ref|YP_001404976.1| - 0.17 11.7 4.4 0.29 11.0 1.0 2.0 2 0 0 2 2 2 0 Bacterial type III secretion protein (HrpB7) Tropomyosin_1 PF12718.2 gi|154151358|ref|YP_001404976.1| - 0.19 11.6 7.6 0.22 11.3 0.6 2.2 2 0 0 2 2 2 0 Tropomyosin like Prefoldin PF02996.12 gi|154151358|ref|YP_001404976.1| - 0.19 11.3 10.4 0.27 10.8 1.3 2.3 1 1 1 2 2 2 0 Prefoldin subunit MitMem_reg PF13012.1 gi|154151358|ref|YP_001404976.1| - 0.27 11.3 4.8 0.33 11.0 0.8 2.0 1 1 1 2 2 2 0 Maintenance of mitochondrial structure and function DUF2408 PF10303.4 gi|154151358|ref|YP_001404976.1| - 0.35 10.9 6.3 2.5 8.2 4.2 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF2408) COG2 PF06148.6 gi|154151358|ref|YP_001404976.1| - 0.48 10.2 7.7 3.4 7.5 1.2 2.1 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 Ax_dynein_light PF10211.4 gi|154151358|ref|YP_001404976.1| - 0.64 9.8 7.3 0.54 10.0 0.6 2.1 2 0 0 2 2 2 0 Axonemal dynein light chain Filament PF00038.16 gi|154151358|ref|YP_001404976.1| - 0.64 9.4 10.4 1 8.7 1.9 1.9 1 1 0 2 2 2 0 Intermediate filament protein ADIP PF11559.3 gi|154151358|ref|YP_001404976.1| - 0.94 9.3 10.9 1.3 8.9 0.9 2.1 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding Tweety PF04906.8 gi|154151358|ref|YP_001404976.1| - 1 7.6 3.5 0.74 8.1 1.7 1.3 1 1 0 1 1 1 0 Tweety Anti-adapt_IraP PF10796.4 gi|154151358|ref|YP_001404976.1| - 1.1 9.6 8.8 0.49 10.8 0.5 2.5 1 1 1 2 2 2 0 Sigma-S stabilisation anti-adaptor protein DUF4404 PF14357.1 gi|154151358|ref|YP_001404976.1| - 1.4 9.3 7.2 6 7.3 0.8 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4404) GAS PF13851.1 gi|154151358|ref|YP_001404976.1| - 1.5 8.0 13.0 3.6 6.7 2.0 2.1 1 1 0 2 2 2 0 Growth-arrest specific micro-tubule binding TPR_MLP1_2 PF07926.7 gi|154151358|ref|YP_001404976.1| - 2.1 8.1 12.3 7 6.4 8.5 1.7 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein SlyX PF04102.7 gi|154151358|ref|YP_001404976.1| - 2.6 8.4 10.0 4.7 7.6 0.2 2.3 2 0 0 2 2 2 0 SlyX V-SNARE PF05008.10 gi|154151358|ref|YP_001404976.1| - 2.9 8.1 10.0 2.9 8.1 2.5 2.1 2 0 0 2 2 2 0 Vesicle transport v-SNARE protein N-terminus V_ATPase_I PF01496.14 gi|154151358|ref|YP_001404976.1| - 3 5.5 7.7 10 3.8 5.4 1.6 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family FliD_C PF07195.7 gi|154151358|ref|YP_001404976.1| - 3.7 6.7 8.6 1 8.5 0.6 2.1 1 1 0 2 2 2 0 Flagellar hook-associated protein 2 C-terminus DUF972 PF06156.8 gi|154151358|ref|YP_001404976.1| - 4.2 7.7 9.5 4.1 7.7 1.4 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF972) AAA_23 PF13476.1 gi|154151358|ref|YP_001404976.1| - 4.3 7.6 7.7 5.5 7.2 5.3 1.2 1 0 0 1 1 1 0 AAA domain DUF4140 PF13600.1 gi|154151358|ref|YP_001404976.1| - 4.4 7.8 8.0 2.2 8.7 0.4 2.3 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) DivIVA PF05103.8 gi|154151358|ref|YP_001404976.1| - 4.9 7.2 10.5 7.3 6.6 6.4 1.8 1 1 1 2 2 2 0 DivIVA protein FlxA PF14282.1 gi|154151358|ref|YP_001404976.1| - 5 7.1 18.2 3.4 7.6 2.5 2.2 2 0 0 2 2 2 0 FlxA-like protein Viral_P18 PF04521.8 gi|154151358|ref|YP_001404976.1| - 5.2 6.5 10.1 0.6 9.5 1.0 2.1 1 1 1 2 2 2 0 ssRNA positive strand viral 18kD cysteine rich protein Spc24 PF08286.6 gi|154151358|ref|YP_001404976.1| - 5.6 6.6 10.6 5.7 6.6 1.3 2.1 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Seryl_tRNA_N PF02403.17 gi|154151358|ref|YP_001404976.1| - 5.8 6.9 10.6 14 5.7 3.4 2.3 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain CDC37_N PF03234.9 gi|154151358|ref|YP_001404976.1| - 8.4 6.6 8.6 10 6.4 6.0 1.1 1 0 0 1 1 1 0 Cdc37 N terminal kinase binding DUF948 PF06103.6 gi|154151358|ref|YP_001404976.1| - 9.2 6.2 8.0 15 5.5 0.7 2.3 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Pcc1 PF09341.5 gi|154151359|ref|YP_001404977.1| - 1.9e-18 66.2 0.3 2.3e-18 65.9 0.2 1.1 1 0 0 1 1 1 1 Transcription factor Pcc1 DNA_RNApol_7kD PF03604.8 gi|154151360|ref|YP_001404978.1| - 5.1e-12 45.0 6.7 6.7e-12 44.6 4.6 1.2 1 0 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit zinc_ribbon_2 PF13240.1 gi|154151360|ref|YP_001404978.1| - 3e-05 23.3 1.0 4.2e-05 22.8 0.7 1.2 1 0 0 1 1 1 1 zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|154151360|ref|YP_001404978.1| - 0.00082 18.5 8.3 0.024 13.8 2.0 1.9 1 1 1 2 2 2 2 zinc-ribbon domain HypA PF01155.14 gi|154151360|ref|YP_001404978.1| - 0.0017 18.0 0.6 0.0017 18.0 0.4 1.1 1 0 0 1 1 1 1 Hydrogenase expression/synthesis hypA family Cys_rich_CPXG PF14255.1 gi|154151360|ref|YP_001404978.1| - 0.0017 18.0 3.1 0.059 13.2 0.6 2.1 1 1 1 2 2 2 1 Cysteine-rich CPXCG Prok-RING_1 PF14446.1 gi|154151360|ref|YP_001404978.1| - 0.0035 17.0 0.9 0.0045 16.6 0.6 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 1 DZR PF12773.2 gi|154151360|ref|YP_001404978.1| - 0.0035 17.1 0.7 0.0046 16.7 0.5 1.2 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_4 PF13717.1 gi|154151360|ref|YP_001404978.1| - 0.0044 16.6 4.1 0.15 11.7 2.8 2.2 1 1 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_5 PF13719.1 gi|154151360|ref|YP_001404978.1| - 0.0045 16.5 4.4 0.17 11.5 3.0 2.2 1 1 0 1 1 1 1 zinc-ribbon domain DUF329 PF03884.9 gi|154151360|ref|YP_001404978.1| - 0.0051 16.3 1.8 0.13 11.8 2.2 1.9 1 1 1 2 2 2 2 Domain of unknown function (DUF329) Zn_Tnp_IS1595 PF12760.2 gi|154151360|ref|YP_001404978.1| - 0.012 15.4 4.1 0.39 10.5 0.0 2.1 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zf-AN1 PF01428.11 gi|154151360|ref|YP_001404978.1| - 0.016 15.1 2.1 0.02 14.7 1.4 1.2 1 0 0 1 1 1 0 AN1-like Zinc finger zinc-ribbons_6 PF07191.7 gi|154151360|ref|YP_001404978.1| - 0.017 14.8 0.4 0.019 14.7 0.3 1.3 1 0 0 1 1 1 0 zinc-ribbons Zn_Tnp_IS1 PF03811.8 gi|154151360|ref|YP_001404978.1| - 0.02 14.3 1.8 0.43 10.1 0.1 2.2 2 0 0 2 2 2 0 InsA N-terminal domain DUF1272 PF06906.6 gi|154151360|ref|YP_001404978.1| - 0.02 14.7 0.5 0.022 14.5 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) NinF PF05810.7 gi|154151360|ref|YP_001404978.1| - 0.027 14.2 0.4 0.027 14.2 0.3 1.1 1 0 0 1 1 1 0 NinF protein TFIIS_C PF01096.13 gi|154151360|ref|YP_001404978.1| - 0.034 13.7 2.5 3.4 7.3 0.2 2.1 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zf-Mss51 PF13824.1 gi|154151360|ref|YP_001404978.1| - 0.044 13.6 0.6 0.054 13.3 0.4 1.2 1 0 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 DUF951 PF06107.6 gi|154151360|ref|YP_001404978.1| - 0.056 12.9 2.4 0.23 10.9 0.1 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF951) A2L_zn_ribbon PF08792.5 gi|154151360|ref|YP_001404978.1| - 0.06 12.8 0.4 0.67 9.4 0.0 2.0 2 0 0 2 2 2 0 A2L zinc ribbon domain DUF2248 PF10005.4 gi|154151360|ref|YP_001404978.1| - 0.062 12.2 0.2 0.063 12.2 0.1 1.0 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2248) UPF0547 PF10571.4 gi|154151360|ref|YP_001404978.1| - 0.065 12.9 5.5 0.11 12.2 3.8 1.4 1 1 0 1 1 1 0 Uncharacterised protein family UPF0547 CpXC PF14353.1 gi|154151360|ref|YP_001404978.1| - 0.075 13.0 2.6 2.1 8.2 0.1 2.1 1 1 1 2 2 2 0 CpXC protein zf-CHCC PF10276.4 gi|154151360|ref|YP_001404978.1| - 0.096 12.5 0.5 0.096 12.5 0.4 1.5 1 1 0 1 1 1 0 Zinc-finger domain zf-ISL3 PF14690.1 gi|154151360|ref|YP_001404978.1| - 0.097 12.7 0.4 0.097 12.7 0.3 2.0 1 1 1 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf-RING_3 PF14369.1 gi|154151360|ref|YP_001404978.1| - 0.099 12.6 1.5 0.15 12.0 1.1 1.3 1 0 0 1 1 1 0 zinc-finger zf-FCS PF06467.9 gi|154151360|ref|YP_001404978.1| - 0.12 12.0 3.8 0.3 10.7 0.0 2.0 1 1 1 2 2 2 0 MYM-type Zinc finger with FCS sequence motif zf-NADH-PPase PF09297.6 gi|154151360|ref|YP_001404978.1| - 0.13 11.8 1.0 0.67 9.5 0.0 2.0 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain DUF2296 PF10058.4 gi|154151360|ref|YP_001404978.1| - 0.15 11.8 2.9 6.5 6.5 0.2 2.1 2 0 0 2 2 2 0 Predicted integral membrane metal-binding protein (DUF2296) DUF2072 PF09845.4 gi|154151360|ref|YP_001404978.1| - 0.16 11.9 0.8 0.16 11.8 0.5 1.1 1 0 0 1 1 1 0 Zn-ribbon containing protein (DUF2072) FANCL_C PF11793.3 gi|154151360|ref|YP_001404978.1| - 0.17 11.8 1.8 1.8 8.6 0.1 2.0 1 1 1 2 2 2 0 FANCL C-terminal domain Sgf11 PF08209.6 gi|154151360|ref|YP_001404978.1| - 0.19 11.0 2.7 6.6 6.1 0.2 2.1 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) zf-LITAF-like PF10601.4 gi|154151360|ref|YP_001404978.1| - 0.22 11.4 2.9 1.6 8.6 0.1 2.0 1 1 1 2 2 2 0 LITAF-like zinc ribbon domain Lar_restr_allev PF14354.1 gi|154151360|ref|YP_001404978.1| - 0.22 11.8 1.5 0.55 10.5 0.0 1.9 1 1 0 1 1 1 0 Restriction alleviation protein Lar OrfB_Zn_ribbon PF07282.6 gi|154151360|ref|YP_001404978.1| - 0.22 11.1 2.9 0.45 10.2 2.0 1.6 1 1 0 1 1 1 0 Putative transposase DNA-binding domain Zn-ribbon_8 PF09723.5 gi|154151360|ref|YP_001404978.1| - 0.23 11.4 4.9 2.1 8.3 3.4 2.0 1 1 0 1 1 1 0 Zinc ribbon domain Elf1 PF05129.8 gi|154151360|ref|YP_001404978.1| - 0.25 11.0 2.3 4.8 6.9 0.1 2.0 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like Desulfoferrod_N PF06397.7 gi|154151360|ref|YP_001404978.1| - 0.28 10.6 3.1 1.6 8.1 0.3 2.1 1 1 1 2 2 2 0 Desulfoferrodoxin, N-terminal domain PyrI_C PF02748.10 gi|154151360|ref|YP_001404978.1| - 0.3 10.5 3.2 0.58 9.6 1.8 1.7 1 1 1 2 2 2 0 Aspartate carbamoyltransferase regulatory chain, metal binding domain zf-C3HC4_3 PF13920.1 gi|154151360|ref|YP_001404978.1| - 0.3 10.7 3.2 0.45 10.2 2.2 1.3 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-Di19 PF05605.7 gi|154151360|ref|YP_001404978.1| - 0.32 11.1 3.8 0.68 10.1 0.3 2.0 1 1 1 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding BIR PF00653.16 gi|154151360|ref|YP_001404978.1| - 0.35 11.3 2.0 3.7 8.0 1.4 2.0 1 1 0 1 1 1 0 Inhibitor of Apoptosis domain DUF2197 PF09963.4 gi|154151360|ref|YP_001404978.1| - 0.38 10.7 2.4 3.2 7.7 0.5 2.0 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2197) TF_Zn_Ribbon PF08271.7 gi|154151360|ref|YP_001404978.1| - 0.45 9.8 3.4 0.99 8.7 0.2 2.0 1 1 1 2 2 2 0 TFIIB zinc-binding ZZ PF00569.12 gi|154151360|ref|YP_001404978.1| - 0.47 10.0 3.1 0.58 9.7 2.2 1.2 1 0 0 1 1 1 0 Zinc finger, ZZ type Cys_rich_KTR PF14205.1 gi|154151360|ref|YP_001404978.1| - 0.48 9.9 3.7 7.1 6.1 0.1 2.1 1 1 1 2 2 2 0 Cysteine-rich KTR DiS_P_DiS PF06750.8 gi|154151360|ref|YP_001404978.1| - 0.5 10.1 2.4 8.5 6.2 0.0 2.0 1 1 1 2 2 2 0 Bacterial Peptidase A24 N-terminal domain Mu-like_Com PF10122.4 gi|154151360|ref|YP_001404978.1| - 1.1 8.4 6.5 3.1 6.9 0.2 2.2 1 1 2 3 3 3 0 Mu-like prophage protein Com zf-HIT PF04438.11 gi|154151360|ref|YP_001404978.1| - 1.9 8.2 9.0 49 3.6 6.3 2.0 1 1 0 1 1 1 0 HIT zinc finger Ribosomal_L37ae PF01780.14 gi|154151361|ref|YP_001404979.1| - 1.6e-33 114.4 5.1 1.9e-33 114.2 3.5 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family OrfB_Zn_ribbon PF07282.6 gi|154151361|ref|YP_001404979.1| - 0.0028 17.2 2.9 0.0029 17.2 1.5 1.4 1 1 0 1 1 1 1 Putative transposase DNA-binding domain Zn-ribbon_8 PF09723.5 gi|154151361|ref|YP_001404979.1| - 0.0073 16.2 4.1 0.038 13.9 0.5 2.2 2 0 0 2 2 2 1 Zinc ribbon domain UPF0547 PF10571.4 gi|154151361|ref|YP_001404979.1| - 0.033 13.8 2.2 2.3 7.9 0.1 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 TF_Zn_Ribbon PF08271.7 gi|154151361|ref|YP_001404979.1| - 0.036 13.3 0.4 0.053 12.8 0.3 1.3 1 0 0 1 1 1 0 TFIIB zinc-binding Zn_Tnp_IS1595 PF12760.2 gi|154151361|ref|YP_001404979.1| - 0.038 13.8 3.1 0.038 13.8 2.1 1.6 2 0 0 2 2 1 0 Transposase zinc-ribbon domain Rubredoxin PF00301.15 gi|154151361|ref|YP_001404979.1| - 0.038 13.8 0.6 6.2 6.7 0.1 2.3 2 0 0 2 2 2 0 Rubredoxin C1_1 PF00130.17 gi|154151361|ref|YP_001404979.1| - 0.041 13.6 0.9 0.054 13.2 0.6 1.2 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) DZR PF12773.2 gi|154151361|ref|YP_001404979.1| - 0.091 12.5 1.8 0.21 11.4 1.2 1.6 1 1 0 1 1 1 0 Double zinc ribbon IBR PF01485.16 gi|154151361|ref|YP_001404979.1| - 0.091 12.6 2.0 0.13 12.1 1.4 1.2 1 0 0 1 1 1 0 IBR domain zf-UBP PF02148.14 gi|154151361|ref|YP_001404979.1| - 0.097 12.7 0.3 0.16 12.1 0.2 1.4 1 0 0 1 1 1 0 Zn-finger in ubiquitin-hydrolases and other protein DUF2461 PF09365.5 gi|154151361|ref|YP_001404979.1| - 0.14 11.4 0.0 0.18 11.1 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical protein (DUF2461) Rep_fac-A_C PF08646.5 gi|154151361|ref|YP_001404979.1| - 0.22 11.2 1.6 0.44 10.2 1.1 1.5 1 1 0 1 1 1 0 Replication factor-A C terminal domain zf-ribbon_3 PF13248.1 gi|154151361|ref|YP_001404979.1| - 0.25 10.5 2.5 9.6 5.5 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain DUF4379 PF14311.1 gi|154151361|ref|YP_001404979.1| - 0.31 10.8 4.2 2.8 7.8 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4379) zinc_ribbon_5 PF13719.1 gi|154151361|ref|YP_001404979.1| - 0.33 10.5 2.7 5.5 6.6 0.2 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Prim_Zn_Ribbon PF08273.7 gi|154151361|ref|YP_001404979.1| - 0.58 10.2 4.5 2.1 8.4 3.1 2.0 1 1 0 1 1 1 0 Zinc-binding domain of primase-helicase zf-H2C2_2 PF13465.1 gi|154151361|ref|YP_001404979.1| - 0.7 10.2 5.7 8.2 6.9 0.2 2.4 1 1 1 2 2 2 0 Zinc-finger double domain zinc_ribbon_4 PF13717.1 gi|154151361|ref|YP_001404979.1| - 0.73 9.5 3.4 7.5 6.3 0.2 2.3 2 0 0 2 2 2 0 zinc-ribbon domain RNA_POL_M_15KD PF02150.11 gi|154151361|ref|YP_001404979.1| - 0.84 9.3 3.8 6.7 6.4 2.6 2.2 1 1 0 1 1 1 0 RNA polymerases M/15 Kd subunit DUF2082 PF09855.4 gi|154151361|ref|YP_001404979.1| - 3.4 7.5 5.8 8.5 6.3 0.2 2.9 2 1 1 3 3 3 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) zinc_ribbon_2 PF13240.1 gi|154151361|ref|YP_001404979.1| - 6.1 6.4 6.8 74 3.0 4.7 2.2 1 1 0 1 1 1 0 zinc-ribbon domain SBDS PF01172.13 gi|154151362|ref|YP_001404980.1| - 2.1e-25 88.3 0.4 3.1e-25 87.7 0.3 1.3 1 0 0 1 1 1 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein SBDS_C PF09377.5 gi|154151362|ref|YP_001404980.1| - 8.2e-23 80.4 0.0 1.4e-22 79.7 0.0 1.4 1 0 0 1 1 1 1 SBDS protein C-terminal domain UPF0262 PF06793.7 gi|154151362|ref|YP_001404980.1| - 0.046 13.4 0.1 0.09 12.4 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0262) DAP3 PF10236.4 gi|154151362|ref|YP_001404980.1| - 0.098 11.5 0.1 0.14 11.0 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 Proteasome PF00227.21 gi|154151363|ref|YP_001404981.1| - 3.4e-60 202.5 0.2 4.5e-60 202.2 0.1 1.2 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.4 gi|154151363|ref|YP_001404981.1| - 1.2e-14 53.2 0.2 2.2e-14 52.4 0.1 1.5 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature RNase_P_Rpp14 PF01900.14 gi|154151364|ref|YP_001404982.1| - 5.4e-17 61.6 0.0 7.4e-17 61.2 0.0 1.2 1 0 0 1 1 1 1 Rpp14/Pop5 family RNase_P_p30 PF01876.11 gi|154151365|ref|YP_001404983.1| - 1.2e-21 76.5 0.0 1.5e-21 76.1 0.0 1.1 1 0 0 1 1 1 1 RNase P subunit p30 Ribosomal_L15e PF00827.12 gi|154151366|ref|YP_001404984.1| - 1.3e-81 272.7 10.5 1.5e-81 272.5 7.3 1.0 1 0 0 1 1 1 1 Ribosomal L15 DUF4440 PF14534.1 gi|154151366|ref|YP_001404984.1| - 0.003 17.7 0.4 0.0075 16.4 0.1 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF4440) MoaC PF01967.16 gi|154151367|ref|YP_001404985.1| - 2.8e-47 159.8 1.5 3.2e-47 159.6 1.0 1.0 1 0 0 1 1 1 1 MoaC family Carb_kinase PF01256.12 gi|154151368|ref|YP_001404986.1| - 1.7e-45 155.2 0.1 2.8e-45 154.4 0.0 1.3 1 0 0 1 1 1 1 Carbohydrate kinase YjeF_N PF03853.10 gi|154151368|ref|YP_001404986.1| - 6.1e-33 113.7 0.0 1.6e-32 112.3 0.0 1.7 1 0 0 1 1 1 1 YjeF-related protein N-terminus HK PF02110.10 gi|154151368|ref|YP_001404986.1| - 8.8e-07 28.3 0.0 1.5e-06 27.5 0.0 1.3 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family DHH PF01368.15 gi|154151369|ref|YP_001404987.1| - 9.7e-12 44.7 0.0 1.6e-11 44.0 0.0 1.3 1 0 0 1 1 1 1 DHH family DHHA1 PF02272.14 gi|154151369|ref|YP_001404987.1| - 3.3e-11 42.7 0.0 7.3e-11 41.6 0.0 1.6 1 0 0 1 1 1 1 DHHA1 domain SBP_bac_5 PF00496.17 gi|154151369|ref|YP_001404987.1| - 0.022 13.5 0.0 0.039 12.7 0.0 1.3 1 0 0 1 1 1 0 Bacterial extracellular solute-binding proteins, family 5 Middle TGT_C2 PF14810.1 gi|154151370|ref|YP_001404988.1| - 5.5e-31 106.2 0.5 1.8e-30 104.5 0.0 2.0 2 1 0 2 2 2 1 Patch-forming domain C2 of tRNA-guanine transglycosylase PUA PF01472.15 gi|154151370|ref|YP_001404988.1| - 1.9e-15 56.3 0.3 2.7e-15 55.8 0.2 1.2 1 0 0 1 1 1 1 PUA domain S_layer_C PF05124.7 gi|154151370|ref|YP_001404988.1| - 0.058 13.0 0.1 0.083 12.5 0.0 1.2 1 0 0 1 1 1 0 S-layer like family, C-terminal region NAC PF01849.13 gi|154151371|ref|YP_001404989.1| - 3.9e-18 64.7 0.9 7.7e-18 63.7 0.6 1.5 1 0 0 1 1 1 1 NAC domain UBA PF00627.26 gi|154151371|ref|YP_001404989.1| - 0.00025 20.7 0.0 0.00025 20.7 0.0 2.3 3 0 0 3 3 3 1 UBA/TS-N domain GCD14 PF08704.5 gi|154151372|ref|YP_001404990.1| - 2.2e-07 30.6 0.1 1.6e-06 27.8 0.0 1.8 1 1 1 2 2 2 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_18 PF12847.2 gi|154151372|ref|YP_001404990.1| - 2.7e-06 27.9 0.1 4.3e-06 27.2 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|154151372|ref|YP_001404990.1| - 9.3e-06 25.6 0.3 5.2e-05 23.2 0.2 2.0 1 1 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 gi|154151372|ref|YP_001404990.1| - 1.5e-05 24.1 0.0 2.2e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase PCMT PF01135.14 gi|154151372|ref|YP_001404990.1| - 9.8e-05 21.9 0.3 0.00016 21.3 0.0 1.6 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.1 gi|154151372|ref|YP_001404990.1| - 0.00015 21.4 0.0 0.00018 21.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|154151372|ref|YP_001404990.1| - 0.00091 18.9 0.0 0.0017 18.0 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain PrmA PF06325.8 gi|154151372|ref|YP_001404990.1| - 0.0025 16.9 0.1 0.0031 16.6 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.9 gi|154151372|ref|YP_001404990.1| - 0.0031 16.9 0.1 0.0062 15.9 0.1 1.5 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.1 gi|154151372|ref|YP_001404990.1| - 0.0092 16.3 0.1 0.022 15.0 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|154151372|ref|YP_001404990.1| - 0.047 14.1 0.0 0.078 13.4 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain UreE_N PF02814.10 gi|154151372|ref|YP_001404990.1| - 0.094 12.2 0.0 0.22 11.0 0.0 1.6 1 0 0 1 1 1 0 UreE urease accessory protein, N-terminal domain UDPG_MGDP_dh_N PF03721.9 gi|154151373|ref|YP_001404991.1| - 4.8e-31 107.5 0.0 8e-31 106.8 0.0 1.3 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh_C PF03720.10 gi|154151373|ref|YP_001404991.1| - 1.5e-23 82.9 0.0 3.1e-23 81.9 0.0 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UDPG_MGDP_dh PF00984.14 gi|154151373|ref|YP_001404991.1| - 2.5e-19 69.2 0.0 5e-19 68.3 0.0 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain Semialdhyde_dh PF01118.19 gi|154151373|ref|YP_001404991.1| - 0.042 14.1 0.0 1.7 8.9 0.0 2.5 2 0 0 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.17 gi|154151374|ref|YP_001404992.1| - 3.1e-22 79.3 2.0 5.3e-22 78.5 1.4 1.4 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold CoA_binding PF02629.14 gi|154151374|ref|YP_001404992.1| - 2.1e-07 31.3 1.1 6.4e-07 29.8 0.8 1.8 1 0 0 1 1 1 1 CoA binding domain NAD_binding_2 PF03446.10 gi|154151374|ref|YP_001404992.1| - 3.9e-07 30.0 0.3 1e-06 28.7 0.1 1.7 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase CoA_binding_2 PF13380.1 gi|154151374|ref|YP_001404992.1| - 0.0016 18.5 0.9 0.0055 16.8 0.3 2.0 2 0 0 2 2 2 1 CoA binding domain F420_oxidored PF03807.12 gi|154151374|ref|YP_001404992.1| - 0.0023 18.3 0.4 0.0054 17.1 0.3 1.7 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.14 gi|154151374|ref|YP_001404992.1| - 0.0037 16.4 0.1 0.0064 15.6 0.1 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PAS_8 PF13188.1 gi|154151374|ref|YP_001404992.1| - 0.025 14.4 0.0 1 9.3 0.0 2.5 2 1 0 2 2 2 0 PAS domain IlvN PF07991.7 gi|154151374|ref|YP_001404992.1| - 0.028 13.8 0.3 0.056 12.8 0.2 1.5 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, catalytic domain Semialdhyde_dh PF01118.19 gi|154151374|ref|YP_001404992.1| - 0.081 13.2 0.3 0.18 12.0 0.2 1.6 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain DegT_DnrJ_EryC1 PF01041.12 gi|154151375|ref|YP_001404993.1| - 3e-132 441.0 0.0 3.3e-132 440.9 0.0 1.0 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.16 gi|154151375|ref|YP_001404993.1| - 2.8e-09 36.5 0.4 5.8e-09 35.5 0.3 1.4 1 1 0 1 1 1 1 Beta-eliminating lyase Aminotran_1_2 PF00155.16 gi|154151375|ref|YP_001404993.1| - 5.7e-09 35.3 0.0 9.1e-09 34.7 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.14 gi|154151375|ref|YP_001404993.1| - 3.6e-06 25.9 0.0 5.7e-06 25.3 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.15 gi|154151375|ref|YP_001404993.1| - 0.00022 19.6 0.0 0.00038 18.8 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme OKR_DC_1 PF01276.15 gi|154151375|ref|YP_001404993.1| - 0.008 14.7 0.0 0.011 14.2 0.0 1.2 1 0 0 1 1 1 1 Orn/Lys/Arg decarboxylase, major domain PyrI PF01948.13 gi|154151376|ref|YP_001404994.1| - 8.8e-36 121.8 1.5 1.1e-35 121.4 1.0 1.1 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, allosteric domain PyrI_C PF02748.10 gi|154151376|ref|YP_001404994.1| - 5.5e-17 60.9 0.1 1.1e-16 59.9 0.0 1.5 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, metal binding domain DUF3129 PF11327.3 gi|154151376|ref|YP_001404994.1| - 0.041 13.6 0.1 0.059 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3129) ParA PF10609.4 gi|154151376|ref|YP_001404994.1| - 0.1 12.5 0.5 0.38 10.6 0.4 1.8 1 1 0 1 1 1 0 ParA/MinD ATPase like CTP_transf_2 PF01467.21 gi|154151377|ref|YP_001404995.1| - 1.2e-11 44.9 0.1 4.5e-11 43.0 0.0 1.8 1 1 0 1 1 1 1 Cytidylyltransferase FAD_syn PF06574.7 gi|154151377|ref|YP_001404995.1| - 0.01 15.4 0.1 0.017 14.7 0.0 1.5 1 0 0 1 1 1 0 FAD synthetase Hexapep PF00132.19 gi|154151378|ref|YP_001404996.1| - 7.2e-16 56.8 21.3 9.4e-08 31.2 2.1 4.7 4 1 1 5 5 5 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|154151378|ref|YP_001404996.1| - 2.2e-05 23.9 21.9 0.036 13.6 1.6 4.5 3 2 2 5 5 5 5 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.7 gi|154151378|ref|YP_001404996.1| - 0.16 10.4 0.4 0.28 9.7 0.2 1.3 1 1 0 1 1 1 0 L-fucokinase Pyr_redox_2 PF07992.9 gi|154151379|ref|YP_001404997.1| - 3.5e-20 72.7 0.0 1.7e-19 70.5 0.0 2.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Fer4 PF00037.22 gi|154151379|ref|YP_001404997.1| - 1.5e-09 37.0 15.4 4.7e-05 22.8 3.6 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.1 gi|154151379|ref|YP_001404997.1| - 8.3e-09 35.5 23.2 3.1e-07 30.5 7.3 2.6 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|154151379|ref|YP_001404997.1| - 1.9e-07 31.0 11.1 0.00026 20.9 1.0 2.7 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.1 gi|154151379|ref|YP_001404997.1| - 4.4e-07 29.6 3.6 0.00035 20.3 0.3 3.0 4 0 0 4 4 3 2 4Fe-4S dicluster domain NAD_binding_8 PF13450.1 gi|154151379|ref|YP_001404997.1| - 5.6e-07 29.4 0.0 1.6e-06 28.0 0.0 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.22 gi|154151379|ref|YP_001404997.1| - 6.2e-07 29.7 2.0 1.6e-05 25.2 1.4 2.4 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.19 gi|154151379|ref|YP_001404997.1| - 6.5e-07 28.5 2.1 0.00011 21.2 0.4 3.7 4 0 0 4 4 4 1 FAD dependent oxidoreductase Fer4_17 PF13534.1 gi|154151379|ref|YP_001404997.1| - 7.1e-07 29.4 4.1 7.1e-07 29.4 2.8 2.3 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|154151379|ref|YP_001404997.1| - 3.2e-06 27.4 13.9 8.2e-05 22.9 2.3 3.2 3 0 0 3 3 3 2 4Fe-4S dicluster domain Pyr_redox_3 PF13738.1 gi|154151379|ref|YP_001404997.1| - 7.9e-06 26.0 1.1 0.0015 18.6 0.2 2.4 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Fer4_16 PF13484.1 gi|154151379|ref|YP_001404997.1| - 1.6e-05 25.5 9.7 0.016 15.9 0.1 3.0 4 0 0 4 4 2 2 4Fe-4S double cluster binding domain FAD_oxidored PF12831.2 gi|154151379|ref|YP_001404997.1| - 1.7e-05 24.0 0.0 3.2e-05 23.2 0.0 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase Fer4_6 PF12837.2 gi|154151379|ref|YP_001404997.1| - 2.2e-05 24.1 20.2 0.00013 21.6 2.9 2.9 3 0 0 3 3 3 2 4Fe-4S binding domain FAD_binding_2 PF00890.19 gi|154151379|ref|YP_001404997.1| - 4.4e-05 22.4 0.5 7.6e-05 21.7 0.3 1.3 1 0 0 1 1 1 1 FAD binding domain Fer4_7 PF12838.2 gi|154151379|ref|YP_001404997.1| - 5.9e-05 23.3 20.0 0.00072 19.8 3.8 2.9 1 1 0 2 2 2 2 4Fe-4S dicluster domain GIDA PF01134.17 gi|154151379|ref|YP_001404997.1| - 0.00018 20.4 0.2 0.00062 18.7 0.0 1.9 2 0 0 2 2 2 1 Glucose inhibited division protein A Amino_oxidase PF01593.19 gi|154151379|ref|YP_001404997.1| - 0.00025 20.2 1.3 0.027 13.5 0.0 2.5 3 0 0 3 3 3 1 Flavin containing amine oxidoreductase Fer4_2 PF12797.2 gi|154151379|ref|YP_001404997.1| - 0.00073 19.3 13.5 0.0047 16.7 1.5 3.7 4 0 0 4 4 3 2 4Fe-4S binding domain Fer4_15 PF13459.1 gi|154151379|ref|YP_001404997.1| - 0.0013 19.2 10.7 0.03 14.8 0.3 3.0 3 0 0 3 3 3 2 4Fe-4S single cluster domain Fer4_13 PF13370.1 gi|154151379|ref|YP_001404997.1| - 0.0017 18.7 7.2 0.5 10.8 0.6 2.7 2 0 0 2 2 2 2 4Fe-4S single cluster domain FAD_binding_3 PF01494.14 gi|154151379|ref|YP_001404997.1| - 0.0044 16.1 0.0 0.0063 15.6 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.9 gi|154151379|ref|YP_001404997.1| - 0.0051 15.3 2.9 0.016 13.6 0.2 2.4 2 1 1 3 3 3 1 HI0933-like protein Thi4 PF01946.12 gi|154151379|ref|YP_001404997.1| - 0.013 14.5 0.0 0.066 12.2 0.0 2.1 2 0 0 2 2 2 0 Thi4 family Fer4_21 PF14697.1 gi|154151379|ref|YP_001404997.1| - 0.019 14.7 1.3 0.019 14.7 0.9 3.2 3 1 0 3 3 3 0 4Fe-4S dicluster domain Fer4_3 PF12798.2 gi|154151379|ref|YP_001404997.1| - 0.033 14.7 6.5 0.033 14.7 4.5 3.7 4 0 0 4 4 2 0 4Fe-4S binding domain NAD_binding_9 PF13454.1 gi|154151379|ref|YP_001404997.1| - 0.25 11.0 1.1 0.66 9.7 0.0 2.2 3 0 0 3 3 3 0 FAD-NAD(P)-binding IF-2B PF01008.12 gi|154151380|ref|YP_001404998.1| - 8e-76 254.7 0.0 9.4e-76 254.4 0.0 1.0 1 0 0 1 1 1 1 Initiation factor 2 subunit family ACP_syn_III PF08545.5 gi|154151380|ref|YP_001404998.1| - 0.0075 15.9 1.1 2 8.1 0.1 2.6 2 0 0 2 2 2 2 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DUF116 PF01976.12 gi|154151381|ref|YP_001404999.1| - 3.7e-49 166.2 0.1 4.5e-49 165.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF116 HTH_25 PF13413.1 gi|154151381|ref|YP_001404999.1| - 0.1 12.2 0.0 1.8 8.2 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain Bactofilin PF04519.8 gi|154151382|ref|YP_001405000.1| - 1.8e-05 24.6 0.4 0.019 14.9 0.5 2.2 1 1 1 2 2 2 2 Polymer-forming cytoskeletal Hexapep PF00132.19 gi|154151382|ref|YP_001405000.1| - 0.27 10.8 2.8 22 4.7 0.1 3.4 3 1 1 4 4 4 0 Bacterial transferase hexapeptide (six repeats) UbiA PF01040.13 gi|154151383|ref|YP_001405001.1| - 7.7e-39 133.4 34.2 9.8e-39 133.1 23.7 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family L6_membrane PF05805.7 gi|154151383|ref|YP_001405001.1| - 4 6.9 8.8 3 7.3 1.3 2.7 2 1 0 2 2 2 0 L6 membrane protein TRM PF02005.11 gi|154151385|ref|YP_001405003.1| - 6.4e-88 295.2 0.0 7.2e-88 295.0 0.0 1.0 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_26 PF13659.1 gi|154151385|ref|YP_001405003.1| - 0.0043 17.0 0.2 0.0085 16.1 0.1 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|154151385|ref|YP_001405003.1| - 0.0086 15.6 0.0 0.013 15.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Zn-ribbon_8 PF09723.5 gi|154151385|ref|YP_001405003.1| - 0.44 10.5 2.6 1.9 8.4 1.8 2.1 1 1 0 1 1 1 0 Zinc ribbon domain UL73_N PF12522.3 gi|154151386|ref|YP_001405004.1| - 5.2 6.6 8.9 0.23 11.0 2.0 1.9 2 0 0 2 2 2 0 Cytomegalovirus glycoprotein N terminal TGS PF02824.16 gi|154151388|ref|YP_001405006.1| - 2.6e-18 65.5 0.0 4.9e-18 64.7 0.0 1.5 1 0 0 1 1 1 1 TGS domain MMR_HSR1 PF01926.18 gi|154151388|ref|YP_001405006.1| - 7.8e-18 64.5 0.1 1.4e-17 63.6 0.1 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.13 gi|154151388|ref|YP_001405006.1| - 1.4e-14 53.6 0.3 3.6e-11 42.5 0.0 2.3 2 0 0 2 2 2 2 Ferrous iron transport protein B Dynamin_N PF00350.18 gi|154151388|ref|YP_001405006.1| - 9.9e-05 22.2 0.3 0.033 14.0 0.1 2.3 1 1 1 2 2 2 2 Dynamin family GTP_EFTU PF00009.22 gi|154151388|ref|YP_001405006.1| - 0.00011 21.6 1.4 0.015 14.7 0.0 3.2 2 1 1 3 3 3 1 Elongation factor Tu GTP binding domain SRPRB PF09439.5 gi|154151388|ref|YP_001405006.1| - 0.0016 17.6 0.1 0.0031 16.7 0.0 1.4 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Miro PF08477.8 gi|154151388|ref|YP_001405006.1| - 0.0027 18.1 0.0 0.0063 17.0 0.0 1.6 1 0 0 1 1 1 1 Miro-like protein Arf PF00025.16 gi|154151388|ref|YP_001405006.1| - 0.0071 15.6 1.8 0.11 11.7 0.1 3.0 2 2 1 3 3 3 1 ADP-ribosylation factor family cobW PF02492.14 gi|154151388|ref|YP_001405006.1| - 0.025 14.0 2.5 0.71 9.3 0.1 2.5 2 1 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_28 PF13521.1 gi|154151388|ref|YP_001405006.1| - 0.029 14.3 0.1 0.054 13.4 0.1 1.4 1 0 0 1 1 1 0 AAA domain AIG1 PF04548.11 gi|154151388|ref|YP_001405006.1| - 0.044 12.8 0.1 0.067 12.2 0.0 1.2 1 0 0 1 1 1 0 AIG1 family DUF258 PF03193.11 gi|154151388|ref|YP_001405006.1| - 0.06 12.5 0.1 0.11 11.7 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF258 AAA_30 PF13604.1 gi|154151388|ref|YP_001405006.1| - 0.1 12.1 0.2 0.21 11.1 0.2 1.5 1 0 0 1 1 1 0 AAA domain RHD3 PF05879.7 gi|154151388|ref|YP_001405006.1| - 0.17 9.7 0.1 0.26 9.1 0.1 1.2 1 0 0 1 1 1 0 Root hair defective 3 GTP-binding protein (RHD3) Plasmid_stabil PF05016.9 gi|154151390|ref|YP_001405008.1| - 4.2e-05 23.8 3.0 4.8e-05 23.6 2.1 1.1 1 0 0 1 1 1 1 Plasmid stabilisation system protein DUF217 PF02697.9 gi|154151391|ref|YP_001405009.1| - 8.5e-05 22.7 0.6 0.00014 22.0 0.4 1.5 1 1 0 1 1 1 1 Uncharacterized ACR, COG1753 YtxH PF12732.2 gi|154151391|ref|YP_001405009.1| - 0.014 15.7 0.1 0.015 15.6 0.1 1.2 1 0 0 1 1 1 0 YtxH-like protein RepB-RCR_reg PF10723.4 gi|154151391|ref|YP_001405009.1| - 0.014 15.1 0.0 0.021 14.5 0.0 1.3 1 0 0 1 1 1 0 Replication regulatory protein RepB Gag_p24 PF00607.15 gi|154151391|ref|YP_001405009.1| - 0.021 14.3 0.0 0.022 14.2 0.0 1.1 1 0 0 1 1 1 0 gag gene protein p24 (core nucleocapsid protein) TPR_11 PF13414.1 gi|154151392|ref|YP_001405010.1| - 4.1e-16 58.3 0.0 6e-16 57.8 0.0 1.2 1 0 0 1 1 1 1 TPR repeat TPR_2 PF07719.12 gi|154151392|ref|YP_001405010.1| - 1.2e-15 56.0 0.1 6.9e-07 28.7 0.0 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.23 gi|154151392|ref|YP_001405010.1| - 7.5e-14 50.6 0.0 1.5e-05 24.3 0.0 2.2 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_16 PF13432.1 gi|154151392|ref|YP_001405010.1| - 9e-11 42.1 0.3 1.4e-10 41.5 0.2 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_9 PF13371.1 gi|154151392|ref|YP_001405010.1| - 4.2e-09 36.1 0.0 7.4e-09 35.3 0.0 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_19 PF14559.1 gi|154151392|ref|YP_001405010.1| - 1e-07 32.1 0.1 2.2e-07 31.0 0.1 1.5 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.1 gi|154151392|ref|YP_001405010.1| - 6.3e-07 28.7 0.0 0.005 16.5 0.0 2.3 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.1 gi|154151392|ref|YP_001405010.1| - 1.3e-06 28.5 0.3 0.045 14.4 0.0 2.6 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.1 gi|154151392|ref|YP_001405010.1| - 1.2e-05 25.1 0.3 0.0074 16.4 0.0 3.1 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_12 PF13424.1 gi|154151392|ref|YP_001405010.1| - 0.00058 19.7 0.1 0.0016 18.2 0.1 1.7 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_7 PF13176.1 gi|154151392|ref|YP_001405010.1| - 0.0033 17.1 0.1 2.8 7.9 0.0 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_6 PF13174.1 gi|154151392|ref|YP_001405010.1| - 0.008 16.5 0.0 1.5 9.4 0.0 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|154151392|ref|YP_001405010.1| - 0.015 15.2 0.0 0.24 11.2 0.0 2.2 2 0 0 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat NARP1 PF12569.3 gi|154151392|ref|YP_001405010.1| - 0.16 10.7 0.0 0.2 10.3 0.0 1.1 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 Alkyl_sulf_dimr PF14863.1 gi|154151392|ref|YP_001405010.1| - 0.17 12.1 0.0 4 7.6 0.0 2.2 1 1 1 2 2 2 0 Alkyl sulfatase dimerisation WD40 PF00400.27 gi|154151394|ref|YP_001405012.1| - 9e-08 31.7 11.9 0.00095 18.9 0.4 6.2 7 0 0 7 7 7 3 WD domain, G-beta repeat PQQ_2 PF13360.1 gi|154151394|ref|YP_001405012.1| - 6.1e-07 29.1 12.9 0.00047 19.6 0.3 2.8 1 1 1 2 2 2 2 PQQ-like domain PQQ_3 PF13570.1 gi|154151394|ref|YP_001405012.1| - 0.015 15.5 26.0 3 8.2 0.9 6.6 7 0 0 7 7 7 0 PQQ-like domain Flavin_Reduct PF01613.13 gi|154151395|ref|YP_001405013.1| - 2.8e-25 88.9 0.1 3.5e-25 88.6 0.1 1.1 1 0 0 1 1 1 1 Flavin reductase like domain DUF498 PF04430.9 gi|154151396|ref|YP_001405014.1| - 1.5e-08 34.1 0.0 1.8e-08 33.8 0.0 1.2 1 1 0 1 1 1 1 Protein of unknown function (DUF498/DUF598) T2SM PF04612.7 gi|154151397|ref|YP_001405015.1| - 0.11 12.2 0.3 0.11 12.2 0.2 1.1 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein M MatE PF01554.13 gi|154151398|ref|YP_001405016.1| - 4.3e-51 172.7 45.6 3.5e-27 95.0 11.0 2.5 2 0 0 2 2 2 2 MatE Polysacc_synt_C PF14667.1 gi|154151398|ref|YP_001405016.1| - 2.6e-08 33.8 17.0 2.6e-08 33.8 11.8 5.3 2 2 2 4 4 4 2 Polysaccharide biosynthesis C-terminal domain TMEM240 PF15207.1 gi|154151398|ref|YP_001405016.1| - 0.084 12.4 0.1 0.16 11.5 0.1 1.4 1 0 0 1 1 1 0 TMEM240 family TrmB PF01978.14 gi|154151399|ref|YP_001405017.1| - 0.0004 20.0 0.0 0.00059 19.4 0.0 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.2 gi|154151399|ref|YP_001405017.1| - 0.0021 17.7 0.1 0.0032 17.1 0.1 1.3 1 0 0 1 1 1 1 MarR family HEAT_2 PF13646.1 gi|154151402|ref|YP_001405020.1| - 9e-34 115.6 12.1 7e-15 55.0 0.3 2.7 1 1 2 3 3 3 3 HEAT repeats HEAT PF02985.17 gi|154151402|ref|YP_001405020.1| - 1.2e-24 84.1 0.9 0.0007 19.4 0.0 5.2 5 0 0 5 5 5 5 HEAT repeat HEAT_PBS PF03130.11 gi|154151402|ref|YP_001405020.1| - 4.2e-18 63.9 21.2 0.00016 21.8 0.1 5.2 5 0 0 5 5 5 4 PBS lyase HEAT-like repeat HEAT_EZ PF13513.1 gi|154151402|ref|YP_001405020.1| - 6.8e-14 51.8 15.1 0.00018 21.8 0.4 4.6 4 1 0 4 4 4 4 HEAT-like repeat Arm PF00514.18 gi|154151402|ref|YP_001405020.1| - 4.8e-12 45.2 0.4 0.15 11.9 0.0 5.1 5 0 0 5 5 5 4 Armadillo/beta-catenin-like repeat Cnd1 PF12717.2 gi|154151402|ref|YP_001405020.1| - 0.00098 19.0 0.0 1.3 8.8 0.0 3.6 1 1 1 2 2 2 2 non-SMC mitotic condensation complex subunit 1 Vac14_Fab1_bd PF12755.2 gi|154151402|ref|YP_001405020.1| - 0.0029 17.9 0.0 1.9 8.9 0.0 3.2 1 1 1 3 3 3 1 Vacuolar 14 Fab1-binding region Adaptin_N PF01602.15 gi|154151402|ref|YP_001405020.1| - 0.0031 15.8 0.0 0.042 12.1 0.0 2.0 1 1 1 2 2 2 1 Adaptin N terminal region DUF4042 PF13251.1 gi|154151402|ref|YP_001405020.1| - 0.014 14.8 0.9 8.8 5.7 0.0 3.3 1 1 3 4 4 4 0 Domain of unknown function (DUF4042) ALF PF03752.8 gi|154151402|ref|YP_001405020.1| - 0.091 12.6 14.4 1.7 8.5 0.1 4.5 4 1 1 5 5 5 0 Short repeats of unknown function PsiE PF06146.7 gi|154151403|ref|YP_001405021.1| - 4.5e-05 23.6 6.9 4.5e-05 23.6 4.8 2.0 2 1 0 2 2 2 1 Phosphate-starvation-inducible E OPT PF03169.10 gi|154151403|ref|YP_001405021.1| - 0.68 8.2 12.1 0.062 11.7 3.7 1.9 2 0 0 2 2 2 0 OPT oligopeptide transporter protein ABC_tran PF00005.22 gi|154151404|ref|YP_001405022.1| - 6.3e-30 104.2 0.0 9.8e-30 103.6 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|154151404|ref|YP_001405022.1| - 1.3e-16 61.4 0.0 6.1e-12 46.1 0.0 2.1 1 1 0 2 2 2 2 AAA domain AAA_10 PF12846.2 gi|154151404|ref|YP_001405022.1| - 0.00078 18.9 0.1 0.096 12.1 0.0 2.5 1 1 2 3 3 3 1 AAA-like domain AAA_23 PF13476.1 gi|154151404|ref|YP_001405022.1| - 0.0012 19.2 0.0 0.002 18.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain Ribosomal_S7e PF01251.13 gi|154151404|ref|YP_001405022.1| - 0.0047 16.4 0.0 0.0074 15.7 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S7e SMC_N PF02463.14 gi|154151404|ref|YP_001405022.1| - 0.0056 15.9 0.1 1 8.5 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain DUF4162 PF13732.1 gi|154151404|ref|YP_001405022.1| - 0.033 14.7 0.0 0.059 13.8 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4162) AAA_15 PF13175.1 gi|154151404|ref|YP_001405022.1| - 0.036 13.0 0.0 0.13 11.3 0.0 1.7 2 0 0 2 2 2 0 AAA ATPase domain AAA_30 PF13604.1 gi|154151404|ref|YP_001405022.1| - 0.063 12.8 0.0 0.4 10.2 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.1 gi|154151404|ref|YP_001405022.1| - 0.12 11.9 0.0 0.23 11.0 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain IstB_IS21 PF01695.12 gi|154151404|ref|YP_001405022.1| - 0.14 11.5 0.2 3.4 7.0 0.0 2.3 2 0 0 2 2 2 0 IstB-like ATP binding protein ABC2_membrane PF01061.19 gi|154151405|ref|YP_001405023.1| - 4.1e-21 75.1 23.7 4.1e-21 75.1 16.4 1.8 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.2 gi|154151405|ref|YP_001405023.1| - 2.4e-07 30.0 35.4 3.2e-07 29.7 24.5 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein FA_desaturase PF00487.19 gi|154151407|ref|YP_001405025.1| - 0.068 12.6 1.5 0.072 12.5 1.0 1.0 1 0 0 1 1 1 0 Fatty acid desaturase PrgI PF12666.2 gi|154151407|ref|YP_001405025.1| - 0.085 13.0 0.6 0.1 12.7 0.4 1.2 1 0 0 1 1 1 0 PrgI family protein DUF4006 PF13179.1 gi|154151407|ref|YP_001405025.1| - 8.6 5.9 7.3 4.3 6.9 0.3 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF4006) Methyltransf_26 PF13659.1 gi|154151408|ref|YP_001405026.1| - 1.1e-13 51.2 0.1 1.6e-13 50.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|154151408|ref|YP_001405026.1| - 6e-13 48.5 0.0 8.6e-13 48.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.1 gi|154151408|ref|YP_001405026.1| - 6.2e-07 29.1 0.0 7.6e-07 28.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|154151408|ref|YP_001405026.1| - 6.5e-07 29.9 0.0 1.3e-06 28.9 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain PrmA PF06325.8 gi|154151408|ref|YP_001405026.1| - 1.1e-06 27.9 0.0 1.7e-06 27.4 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_23 PF13489.1 gi|154151408|ref|YP_001405026.1| - 1.4e-05 24.8 0.1 0.00011 21.9 0.0 2.3 1 1 1 2 2 2 1 Methyltransferase domain UPF0146 PF03686.8 gi|154151408|ref|YP_001405026.1| - 0.00017 21.4 0.0 0.00034 20.4 0.0 1.4 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0146) Methyltransf_11 PF08241.7 gi|154151408|ref|YP_001405026.1| - 0.00085 19.7 0.0 0.011 16.2 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|154151408|ref|YP_001405026.1| - 0.0016 18.8 0.0 0.035 14.5 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain MetW PF07021.7 gi|154151408|ref|YP_001405026.1| - 0.0018 17.6 0.0 0.0029 17.0 0.0 1.2 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW PCMT PF01135.14 gi|154151408|ref|YP_001405026.1| - 0.0046 16.5 0.0 0.013 15.0 0.0 1.6 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_25 PF13649.1 gi|154151408|ref|YP_001405026.1| - 0.012 15.9 0.0 0.025 14.9 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain CMAS PF02353.15 gi|154151408|ref|YP_001405026.1| - 0.013 14.6 0.0 0.065 12.3 0.0 1.8 2 0 0 2 2 2 0 Mycolic acid cyclopropane synthetase GCD14 PF08704.5 gi|154151408|ref|YP_001405026.1| - 0.018 14.5 0.0 0.023 14.1 0.0 1.1 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Met_10 PF02475.11 gi|154151408|ref|YP_001405026.1| - 0.089 12.3 0.0 0.14 11.7 0.0 1.2 1 0 0 1 1 1 0 Met-10+ like-protein ACP_syn_III_C PF08541.5 gi|154151408|ref|YP_001405026.1| - 0.091 12.7 0.0 0.18 11.8 0.0 1.4 1 0 0 1 1 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Methyltransf_24 PF13578.1 gi|154151408|ref|YP_001405026.1| - 0.11 13.3 0.0 0.19 12.5 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain DUF4405 PF14358.1 gi|154151409|ref|YP_001405027.1| - 1.1e-12 47.8 2.9 1.4e-12 47.5 2.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4405) Cytochrom_B_N PF00033.14 gi|154151409|ref|YP_001405027.1| - 0.017 14.4 2.3 0.023 14.0 1.6 1.3 1 0 0 1 1 1 0 Cytochrome b(N-terminal)/b6/petB Ferric_reduct PF01794.14 gi|154151409|ref|YP_001405027.1| - 0.087 12.9 2.1 0.098 12.7 1.5 1.3 1 1 0 1 1 1 0 Ferric reductase like transmembrane component Ni_hydr_CYTB PF01292.15 gi|154151409|ref|YP_001405027.1| - 0.17 11.2 3.3 0.29 10.5 2.3 1.3 1 1 0 1 1 1 0 Prokaryotic cytochrome b561 PepSY_TM_3 PF13706.1 gi|154151409|ref|YP_001405027.1| - 8.1 5.9 11.4 7.8 6.0 0.7 2.3 2 0 0 2 2 2 0 PepSY-associated TM helix RrnaAD PF00398.15 gi|154151411|ref|YP_001405029.1| - 3.2e-49 167.3 0.0 3.7e-49 167.1 0.0 1.0 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_26 PF13659.1 gi|154151411|ref|YP_001405029.1| - 1.1e-09 38.3 0.0 1.5e-09 37.8 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|154151411|ref|YP_001405029.1| - 3.9e-05 24.2 0.0 6.1e-05 23.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Spermine_synth PF01564.12 gi|154151411|ref|YP_001405029.1| - 0.0018 17.2 0.0 0.0025 16.7 0.0 1.2 1 0 0 1 1 1 1 Spermine/spermidine synthase Methyltransf_23 PF13489.1 gi|154151411|ref|YP_001405029.1| - 0.0023 17.6 0.0 0.0029 17.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|154151411|ref|YP_001405029.1| - 0.0082 16.6 0.0 0.017 15.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|154151411|ref|YP_001405029.1| - 0.0089 16.3 0.0 0.014 15.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|154151411|ref|YP_001405029.1| - 0.012 15.0 0.0 0.017 14.5 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain DREV PF05219.7 gi|154151411|ref|YP_001405029.1| - 0.02 13.7 0.0 0.037 12.9 0.0 1.4 1 0 0 1 1 1 0 DREV methyltransferase DUF655 PF04919.7 gi|154151412|ref|YP_001405030.1| - 2.2e-66 223.0 0.4 2.5e-66 222.8 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF655) HHH_6 PF14579.1 gi|154151412|ref|YP_001405030.1| - 0.00029 20.8 0.0 0.0012 18.8 0.0 1.9 1 1 1 2 2 2 1 Helix-hairpin-helix motif RNA_pol_Rpb4 PF03874.11 gi|154151413|ref|YP_001405031.1| - 1e-13 51.3 0.7 1.1e-13 51.2 0.5 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb4 VIT1 PF01988.14 gi|154151413|ref|YP_001405031.1| - 0.0015 18.0 0.8 0.0017 17.9 0.5 1.1 1 0 0 1 1 1 1 VIT family FliG_M PF14841.1 gi|154151413|ref|YP_001405031.1| - 0.037 14.0 0.3 0.07 13.1 0.2 1.5 1 1 0 1 1 1 0 FliG middle domain ERM PF00769.14 gi|154151413|ref|YP_001405031.1| - 0.19 11.2 4.1 0.23 10.9 2.8 1.1 1 0 0 1 1 1 0 Ezrin/radixin/moesin family Ribosomal_L21e PF01157.13 gi|154151414|ref|YP_001405032.1| - 6.4e-30 102.8 2.5 7e-30 102.7 1.7 1.0 1 0 0 1 1 1 1 Ribosomal protein L21e THUMP PF02926.12 gi|154151415|ref|YP_001405033.1| - 5.4e-11 42.5 0.0 7.7e-10 38.8 0.0 2.4 2 1 0 2 2 2 1 THUMP domain FYVE PF01363.16 gi|154151415|ref|YP_001405033.1| - 0.072 12.9 4.6 0.072 12.9 0.1 2.7 3 0 0 3 3 3 0 FYVE zinc finger Methyltrn_RNA_2 PF04013.7 gi|154151416|ref|YP_001405034.1| - 4.9e-57 192.7 0.0 5.4e-57 192.5 0.0 1.0 1 0 0 1 1 1 1 Putative SAM-dependent RNA methyltransferase SRP54 PF00448.17 gi|154151417|ref|YP_001405035.1| - 1.7e-67 226.7 0.7 1.7e-67 226.7 0.5 1.5 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.14 gi|154151417|ref|YP_001405035.1| - 6e-31 106.7 1.3 6e-31 106.7 0.9 3.2 3 0 0 3 3 3 1 Signal peptide binding domain SRP54_N PF02881.14 gi|154151417|ref|YP_001405035.1| - 4.3e-14 52.3 2.9 1.2e-13 50.9 1.6 2.1 2 0 0 2 2 1 1 SRP54-type protein, helical bundle domain Zeta_toxin PF06414.7 gi|154151417|ref|YP_001405035.1| - 9.5e-06 24.8 0.1 2e-05 23.8 0.1 1.6 1 1 0 1 1 1 1 Zeta toxin CbiA PF01656.18 gi|154151417|ref|YP_001405035.1| - 2.5e-05 23.7 2.4 0.0022 17.4 0.2 2.7 3 0 0 3 3 3 1 CobQ/CobB/MinD/ParA nucleotide binding domain cobW PF02492.14 gi|154151417|ref|YP_001405035.1| - 7.8e-05 22.1 1.0 0.00027 20.4 0.7 1.8 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain MobB PF03205.9 gi|154151417|ref|YP_001405035.1| - 0.00018 21.2 0.2 0.00065 19.4 0.2 2.0 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B 6PF2K PF01591.13 gi|154151417|ref|YP_001405035.1| - 0.00019 20.6 0.0 0.0029 16.7 0.0 2.2 2 0 0 2 2 2 1 6-phosphofructo-2-kinase APS_kinase PF01583.15 gi|154151417|ref|YP_001405035.1| - 0.00025 20.7 0.1 0.00062 19.4 0.0 1.7 2 0 0 2 2 1 1 Adenylylsulphate kinase AAA_16 PF13191.1 gi|154151417|ref|YP_001405035.1| - 0.00037 20.5 1.1 0.002 18.1 0.1 2.3 1 1 1 2 2 2 1 AAA ATPase domain AAA_22 PF13401.1 gi|154151417|ref|YP_001405035.1| - 0.00045 20.3 0.3 0.013 15.6 0.0 2.6 2 0 0 2 2 2 1 AAA domain AAA_17 PF13207.1 gi|154151417|ref|YP_001405035.1| - 0.00055 20.7 0.1 0.0018 19.0 0.0 2.0 2 1 0 2 2 1 1 AAA domain AAA_33 PF13671.1 gi|154151417|ref|YP_001405035.1| - 0.0009 19.1 0.1 0.0025 17.6 0.0 1.8 2 0 0 2 2 2 1 AAA domain ArgK PF03308.11 gi|154151417|ref|YP_001405035.1| - 0.00094 18.0 0.3 0.0029 16.4 0.0 1.9 2 0 0 2 2 2 1 ArgK protein AAA_19 PF13245.1 gi|154151417|ref|YP_001405035.1| - 0.0018 17.9 0.2 0.0094 15.6 0.0 2.3 3 0 0 3 3 2 1 Part of AAA domain KTI12 PF08433.5 gi|154151417|ref|YP_001405035.1| - 0.0023 17.1 0.5 0.0048 16.1 0.0 1.7 2 0 0 2 2 2 1 Chromatin associated protein KTI12 TrwB_AAD_bind PF10412.4 gi|154151417|ref|YP_001405035.1| - 0.006 15.2 0.1 0.068 11.7 0.0 2.2 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain Thymidylate_kin PF02223.12 gi|154151417|ref|YP_001405035.1| - 0.0085 15.4 0.9 0.042 13.2 0.2 2.4 2 0 0 2 2 2 1 Thymidylate kinase AAA_18 PF13238.1 gi|154151417|ref|YP_001405035.1| - 0.012 15.8 0.2 0.076 13.3 0.2 2.4 1 1 0 1 1 1 0 AAA domain NTPase_1 PF03266.10 gi|154151417|ref|YP_001405035.1| - 0.013 15.1 1.8 0.016 14.9 0.1 1.9 2 0 0 2 2 2 0 NTPase LpxK PF02606.9 gi|154151417|ref|YP_001405035.1| - 0.016 14.2 0.1 0.029 13.3 0.0 1.4 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase AAA_10 PF12846.2 gi|154151417|ref|YP_001405035.1| - 0.016 14.6 0.3 0.048 13.1 0.2 2.0 1 1 0 1 1 1 0 AAA-like domain ATP_bind_1 PF03029.12 gi|154151417|ref|YP_001405035.1| - 0.033 13.7 0.1 0.1 12.1 0.1 1.9 2 0 0 2 2 1 0 Conserved hypothetical ATP binding protein ArsA_ATPase PF02374.10 gi|154151417|ref|YP_001405035.1| - 0.086 11.8 2.6 0.58 9.1 0.2 2.4 2 0 0 2 2 2 0 Anion-transporting ATPase AAA_26 PF13500.1 gi|154151417|ref|YP_001405035.1| - 0.093 12.3 0.8 0.54 9.8 0.5 2.2 1 1 1 2 2 2 0 AAA domain AAA_30 PF13604.1 gi|154151417|ref|YP_001405035.1| - 0.14 11.7 0.1 0.14 11.7 0.0 2.6 2 1 0 2 2 2 0 AAA domain PRK PF00485.13 gi|154151417|ref|YP_001405035.1| - 0.19 11.2 1.2 0.49 9.9 0.0 2.3 3 0 0 3 3 2 0 Phosphoribulokinase / Uridine kinase family AAA_25 PF13481.1 gi|154151417|ref|YP_001405035.1| - 0.55 9.6 3.8 3.4 7.0 0.3 2.7 2 1 0 2 2 2 0 AAA domain SRP54 PF00448.17 gi|154151418|ref|YP_001405036.1| - 5.2e-65 218.5 1.4 7.4e-65 218.0 1.0 1.2 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP54_N PF02881.14 gi|154151418|ref|YP_001405036.1| - 7.8e-10 38.7 3.0 1.2e-09 38.0 1.1 2.0 2 0 0 2 2 2 1 SRP54-type protein, helical bundle domain Zeta_toxin PF06414.7 gi|154151418|ref|YP_001405036.1| - 1.8e-05 23.9 0.1 2.8e-05 23.2 0.1 1.2 1 0 0 1 1 1 1 Zeta toxin APS_kinase PF01583.15 gi|154151418|ref|YP_001405036.1| - 9.3e-05 22.1 0.0 0.00016 21.3 0.0 1.3 1 0 0 1 1 1 1 Adenylylsulphate kinase cobW PF02492.14 gi|154151418|ref|YP_001405036.1| - 0.00011 21.7 0.6 0.00019 20.9 0.4 1.3 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_19 PF13245.1 gi|154151418|ref|YP_001405036.1| - 0.00033 20.3 1.4 0.00068 19.3 0.2 2.2 2 0 0 2 2 2 1 Part of AAA domain AAA_30 PF13604.1 gi|154151418|ref|YP_001405036.1| - 0.00047 19.7 2.9 0.00053 19.6 0.5 2.1 2 1 0 2 2 2 1 AAA domain CbiA PF01656.18 gi|154151418|ref|YP_001405036.1| - 0.001 18.5 3.2 0.012 14.9 2.2 2.3 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_33 PF13671.1 gi|154151418|ref|YP_001405036.1| - 0.0025 17.7 0.0 0.0045 16.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA PF00004.24 gi|154151418|ref|YP_001405036.1| - 0.003 17.7 0.3 0.0066 16.6 0.2 1.7 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.1 gi|154151418|ref|YP_001405036.1| - 0.0037 17.4 0.0 0.0095 16.0 0.0 1.6 1 0 0 1 1 1 1 AAA domain NTPase_1 PF03266.10 gi|154151418|ref|YP_001405036.1| - 0.007 16.0 2.5 0.021 14.5 1.7 1.9 1 1 0 1 1 1 1 NTPase AAA_16 PF13191.1 gi|154151418|ref|YP_001405036.1| - 0.0071 16.3 0.3 0.016 15.2 0.0 1.7 2 0 0 2 2 2 1 AAA ATPase domain ArgK PF03308.11 gi|154151418|ref|YP_001405036.1| - 0.0076 15.0 0.3 0.017 13.8 0.2 1.5 1 0 0 1 1 1 1 ArgK protein MobB PF03205.9 gi|154151418|ref|YP_001405036.1| - 0.0082 15.8 2.9 0.0096 15.6 0.5 2.2 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B Thymidylate_kin PF02223.12 gi|154151418|ref|YP_001405036.1| - 0.012 14.9 0.3 0.048 13.0 0.2 1.9 2 0 0 2 2 2 0 Thymidylate kinase AAA_17 PF13207.1 gi|154151418|ref|YP_001405036.1| - 0.015 16.1 1.0 0.031 15.1 0.3 2.0 2 1 0 2 2 1 0 AAA domain AAA_28 PF13521.1 gi|154151418|ref|YP_001405036.1| - 0.043 13.7 1.3 0.087 12.7 0.7 1.9 2 1 0 2 2 1 0 AAA domain T2SE PF00437.15 gi|154151418|ref|YP_001405036.1| - 0.05 12.5 0.4 0.096 11.5 0.1 1.7 1 1 1 2 2 2 0 Type II/IV secretion system protein Methyltransf_31 PF13847.1 gi|154151418|ref|YP_001405036.1| - 0.079 12.5 0.0 0.14 11.7 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain KTI12 PF08433.5 gi|154151418|ref|YP_001405036.1| - 0.12 11.5 0.0 0.22 10.6 0.0 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_29 PF13555.1 gi|154151418|ref|YP_001405036.1| - 0.12 11.8 0.0 0.24 10.9 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain ResIII PF04851.10 gi|154151418|ref|YP_001405036.1| - 0.16 11.7 0.1 0.35 10.6 0.0 1.5 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit DAP3 PF10236.4 gi|154151418|ref|YP_001405036.1| - 0.18 10.7 0.1 0.3 9.9 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 G-alpha PF00503.15 gi|154151418|ref|YP_001405036.1| - 0.2 10.2 0.0 0.26 9.9 0.0 1.3 1 0 0 1 1 1 0 G-protein alpha subunit Prefoldin PF02996.12 gi|154151419|ref|YP_001405037.1| - 1.8e-20 72.7 5.8 2.5e-20 72.3 4.0 1.3 1 0 0 1 1 1 1 Prefoldin subunit Prefoldin_2 PF01920.15 gi|154151419|ref|YP_001405037.1| - 0.0012 18.5 7.1 0.0047 16.6 1.8 2.2 2 0 0 2 2 2 1 Prefoldin subunit Seryl_tRNA_N PF02403.17 gi|154151419|ref|YP_001405037.1| - 0.0014 18.6 1.3 0.002 18.1 0.0 1.8 2 0 0 2 2 2 1 Seryl-tRNA synthetase N-terminal domain Matrilin_ccoil PF10393.4 gi|154151419|ref|YP_001405037.1| - 0.0082 15.4 2.2 0.0089 15.3 0.3 1.9 2 0 0 2 2 2 1 Trimeric coiled-coil oligomerisation domain of matrilin DUF16 PF01519.11 gi|154151419|ref|YP_001405037.1| - 0.022 14.9 4.3 0.081 13.1 0.6 2.1 2 0 0 2 2 2 0 Protein of unknown function DUF16 Nsp1_C PF05064.8 gi|154151419|ref|YP_001405037.1| - 0.026 14.1 1.8 0.13 11.9 0.2 2.1 2 0 0 2 2 2 0 Nsp1-like C-terminal region DLD PF14878.1 gi|154151419|ref|YP_001405037.1| - 0.057 13.5 1.7 0.071 13.2 0.2 1.8 2 0 0 2 2 2 0 Death-like domain of SPT6 NPV_P10 PF05531.7 gi|154151419|ref|YP_001405037.1| - 0.076 13.2 0.6 0.17 12.1 0.4 1.5 1 0 0 1 1 1 0 Nucleopolyhedrovirus P10 protein PEP-utilisers_N PF05524.8 gi|154151419|ref|YP_001405037.1| - 0.11 12.3 3.5 0.17 11.7 0.1 2.1 2 0 0 2 2 2 0 PEP-utilising enzyme, N-terminal Snapin_Pallidin PF14712.1 gi|154151419|ref|YP_001405037.1| - 0.11 12.7 3.2 0.14 12.4 0.4 2.1 2 0 0 2 2 2 0 Snapin/Pallidin DUF4463 PF14703.1 gi|154151419|ref|YP_001405037.1| - 0.28 11.7 2.0 0.77 10.3 0.0 2.6 3 1 0 3 3 3 0 Domain of unknown function (DUF4463) CENP-F_leu_zip PF10473.4 gi|154151419|ref|YP_001405037.1| - 0.3 10.9 5.1 0.15 11.9 0.7 2.0 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF904 PF06005.7 gi|154151419|ref|YP_001405037.1| - 0.53 10.6 8.1 0.14 12.4 2.7 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF904) TSC22 PF01166.13 gi|154151419|ref|YP_001405037.1| - 2.3 8.2 5.6 1.5 8.8 0.8 2.6 2 2 0 2 2 2 0 TSC-22/dip/bun family APG6 PF04111.7 gi|154151419|ref|YP_001405037.1| - 6.2 5.7 6.8 1.8 7.4 0.5 2.0 2 0 0 2 2 2 0 Autophagy protein Apg6 MFS_1 PF07690.11 gi|154151420|ref|YP_001405038.1| - 2.4e-52 177.8 54.3 2.4e-52 177.8 37.7 2.8 1 1 0 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|154151420|ref|YP_001405038.1| - 1.5e-11 43.6 38.1 3.3e-06 25.9 11.9 2.9 2 1 0 2 2 2 2 Sugar (and other) transporter MFS_2 PF13347.1 gi|154151420|ref|YP_001405038.1| - 1.7e-06 26.7 43.6 2.1e-05 23.1 14.3 2.5 2 0 0 2 2 2 2 MFS/sugar transport protein DUF3784 PF12650.2 gi|154151420|ref|YP_001405038.1| - 0.39 10.6 0.1 0.39 10.6 0.1 5.9 5 3 2 7 7 7 0 Domain of unknown function (DUF3784) DUF2367 PF10164.4 gi|154151420|ref|YP_001405038.1| - 9.6 6.1 7.6 0.55 10.1 0.7 2.4 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2367) Ribosomal_L18ae PF01775.12 gi|154151421|ref|YP_001405039.1| - 2.4e-06 27.4 0.1 5.7e-06 26.2 0.0 1.6 1 1 0 1 1 1 1 Ribosomal L18ae/LX protein domain DUF3721 PF12518.3 gi|154151421|ref|YP_001405039.1| - 0.057 13.0 0.3 0.11 12.0 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function eIF-6 PF01912.13 gi|154151422|ref|YP_001405040.1| - 8.4e-69 230.6 2.6 9.7e-69 230.4 1.8 1.0 1 0 0 1 1 1 1 eIF-6 family Ribosomal_L31e PF01198.14 gi|154151423|ref|YP_001405041.1| - 2.6e-30 103.8 2.1 2.9e-30 103.7 1.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L31e CmcI PF04989.7 gi|154151423|ref|YP_001405041.1| - 0.12 11.6 0.0 0.14 11.4 0.0 1.1 1 0 0 1 1 1 0 Cephalosporin hydroxylase Ribosomal_L39 PF00832.15 gi|154151424|ref|YP_001405042.1| - 3.5e-20 71.1 10.8 4.2e-20 70.9 7.5 1.1 1 0 0 1 1 1 1 Ribosomal L39 protein Asn_synthase PF00733.16 gi|154151425|ref|YP_001405043.1| - 0.004 16.6 0.0 0.0052 16.3 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase ATP_bind_4 PF01902.12 gi|154151425|ref|YP_001405043.1| - 0.01 15.2 0.1 0.028 13.7 0.1 2.1 1 1 0 1 1 1 0 ATP-binding region dsDNA_bind PF01984.15 gi|154151426|ref|YP_001405044.1| - 5.9e-33 113.0 15.5 6.9e-33 112.8 10.8 1.0 1 0 0 1 1 1 1 Double-stranded DNA-binding domain DUF3069 PF11269.3 gi|154151426|ref|YP_001405044.1| - 0.34 11.0 2.4 0.35 10.9 0.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3069) Kinase-PPPase PF03618.9 gi|154151426|ref|YP_001405044.1| - 0.56 9.6 2.9 0.69 9.3 1.9 1.3 1 1 0 1 1 1 0 Kinase/pyrophosphorylase Ribosomal_S19e PF01090.14 gi|154151427|ref|YP_001405045.1| - 1.2e-58 196.5 0.0 2e-58 195.7 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein S19e GntR PF00392.16 gi|154151427|ref|YP_001405045.1| - 0.074 12.4 0.0 0.19 11.2 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HemN_C PF06969.11 gi|154151427|ref|YP_001405045.1| - 0.1 12.6 0.0 0.19 11.8 0.0 1.4 1 0 0 1 1 1 0 HemN C-terminal domain PaaX PF07848.7 gi|154151427|ref|YP_001405045.1| - 0.13 12.2 0.0 0.32 11.0 0.0 1.6 1 0 0 1 1 1 0 PaaX-like protein RR_TM4-6 PF06459.7 gi|154151427|ref|YP_001405045.1| - 6.2 6.6 7.4 7.7 6.3 5.1 1.1 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 CRS1_YhbY PF01985.16 gi|154151428|ref|YP_001405046.1| - 2.3e-15 56.3 0.2 2.8e-15 56.0 0.2 1.1 1 0 0 1 1 1 1 CRS1 / YhbY (CRM) domain Rpr2 PF04032.11 gi|154151429|ref|YP_001405047.1| - 1.8e-19 69.3 0.1 2.2e-19 69.1 0.1 1.1 1 0 0 1 1 1 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain ATPase-cat_bd PF12156.3 gi|154151429|ref|YP_001405047.1| - 0.058 13.9 0.8 0.092 13.2 0.6 1.3 1 0 0 1 1 1 0 Putative metal-binding domain of cation transport ATPase zf-FCS PF06467.9 gi|154151429|ref|YP_001405047.1| - 0.15 11.6 3.2 0.23 11.1 0.1 2.1 1 1 1 2 2 2 0 MYM-type Zinc finger with FCS sequence motif zf-ribbon_3 PF13248.1 gi|154151429|ref|YP_001405047.1| - 0.18 11.0 0.7 1.2 8.4 0.0 2.1 2 0 0 2 2 2 0 zinc-ribbon domain zf-Dof PF02701.10 gi|154151429|ref|YP_001405047.1| - 0.96 9.4 4.7 0.17 11.8 0.6 1.6 2 0 0 2 2 2 0 Dof domain, zinc finger Formyl_trans_N PF00551.14 gi|154151430|ref|YP_001405048.1| - 3.8e-57 192.7 0.0 4.3e-57 192.5 0.0 1.0 1 0 0 1 1 1 1 Formyl transferase Glyco_trans_4_4 PF13579.1 gi|154151430|ref|YP_001405048.1| - 0.0027 17.8 0.2 0.0037 17.4 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferase 4-like domain Peripla_BP_4 PF13407.1 gi|154151430|ref|YP_001405048.1| - 0.036 13.4 0.1 0.078 12.3 0.1 1.5 1 1 0 1 1 1 0 Periplasmic binding protein domain DRTGG PF07085.7 gi|154151430|ref|YP_001405048.1| - 0.05 13.2 0.0 0.21 11.1 0.0 2.1 1 1 1 2 2 2 0 DRTGG domain DUF126 PF01989.11 gi|154151430|ref|YP_001405048.1| - 0.11 12.1 0.3 0.26 10.9 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function DUF126 DUF21 PF01595.15 gi|154151431|ref|YP_001405049.1| - 2.5e-55 186.6 2.7 3.3e-55 186.2 1.9 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF21 CorC_HlyC PF03471.12 gi|154151431|ref|YP_001405049.1| - 9.8e-21 73.3 0.1 2.8e-20 71.8 0.0 1.8 2 0 0 2 2 2 1 Transporter associated domain CBS PF00571.23 gi|154151431|ref|YP_001405049.1| - 1.8e-19 69.2 2.8 2.8e-09 36.6 0.1 2.4 2 0 0 2 2 2 2 CBS domain Arch_ATPase PF01637.13 gi|154151431|ref|YP_001405049.1| - 0.056 13.1 0.1 0.088 12.4 0.1 1.3 1 0 0 1 1 1 0 Archaeal ATPase AP_endonuc_2 PF01261.19 gi|154151432|ref|YP_001405050.1| - 1.4e-22 80.0 0.0 2e-22 79.5 0.0 1.2 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel Exonuc_VII_L PF02601.10 gi|154151433|ref|YP_001405051.1| - 2.9e-72 243.5 0.0 6.2e-66 222.7 0.0 2.1 1 1 1 2 2 2 2 Exonuclease VII, large subunit tRNA_anti_2 PF13742.1 gi|154151433|ref|YP_001405051.1| - 8.3e-25 86.5 0.0 1.4e-24 85.7 0.0 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA_anti-codon PF01336.20 gi|154151433|ref|YP_001405051.1| - 1.6e-05 24.6 0.1 3.3e-05 23.6 0.0 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain Phage_base_V PF04717.7 gi|154151433|ref|YP_001405051.1| - 0.025 14.4 0.0 0.075 12.9 0.0 1.8 1 0 0 1 1 1 0 Phage-related baseplate assembly protein SSB PF00436.20 gi|154151433|ref|YP_001405051.1| - 0.05 13.4 0.0 0.098 12.5 0.0 1.5 1 0 0 1 1 1 0 Single-strand binding protein family Exonuc_VII_S PF02609.11 gi|154151434|ref|YP_001405052.1| - 4e-21 74.5 4.3 4.4e-21 74.3 3.0 1.0 1 0 0 1 1 1 1 Exonuclease VII small subunit Nsp1_C PF05064.8 gi|154151434|ref|YP_001405052.1| - 0.031 13.9 0.1 0.053 13.1 0.1 1.5 1 1 0 1 1 1 0 Nsp1-like C-terminal region MAD PF05557.8 gi|154151434|ref|YP_001405052.1| - 0.071 11.1 0.2 0.071 11.2 0.1 1.0 1 0 0 1 1 1 0 Mitotic checkpoint protein HrpB7 PF09486.5 gi|154151434|ref|YP_001405052.1| - 0.086 12.7 0.1 0.096 12.6 0.1 1.1 1 0 0 1 1 1 0 Bacterial type III secretion protein (HrpB7) HR1 PF02185.11 gi|154151434|ref|YP_001405052.1| - 0.093 12.4 0.9 1.3 8.7 0.7 2.0 1 1 0 1 1 1 0 Hr1 repeat ALIX_LYPXL_bnd PF13949.1 gi|154151434|ref|YP_001405052.1| - 0.098 11.5 0.2 0.1 11.5 0.2 1.0 1 0 0 1 1 1 0 ALIX V-shaped domain binding to HIV FH2 PF02181.18 gi|154151434|ref|YP_001405052.1| - 0.11 11.3 0.1 0.2 10.5 0.1 1.3 1 1 0 1 1 1 0 Formin Homology 2 Domain DASH_Duo1 PF08651.5 gi|154151434|ref|YP_001405052.1| - 0.11 12.0 0.1 0.13 11.8 0.1 1.2 1 0 0 1 1 1 0 DASH complex subunit Duo1 DUF3375 PF11855.3 gi|154151434|ref|YP_001405052.1| - 0.14 10.8 0.4 0.16 10.6 0.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3375) DUF371 PF04027.8 gi|154151435|ref|YP_001405053.1| - 4.6e-44 149.2 0.1 5.2e-44 149.0 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF371) DUF2387 PF09526.5 gi|154151436|ref|YP_001405054.1| - 1.2e-06 28.3 1.9 2.7e-05 24.0 0.2 2.2 2 0 0 2 2 2 1 Probable metal-binding protein (DUF2387) Ribosomal_S27e PF01667.12 gi|154151436|ref|YP_001405054.1| - 0.0036 16.8 0.3 0.0077 15.7 0.2 1.6 1 0 0 1 1 1 1 Ribosomal protein S27 OrfB_Zn_ribbon PF07282.6 gi|154151436|ref|YP_001405054.1| - 0.02 14.5 2.4 0.02 14.5 1.7 1.8 2 0 0 2 2 2 0 Putative transposase DNA-binding domain eIF-5_eIF-2B PF01873.12 gi|154151436|ref|YP_001405054.1| - 0.028 14.0 0.9 0.065 12.8 0.6 1.6 1 0 0 1 1 1 0 Domain found in IF2B/IF5 DUF35_N PF12172.3 gi|154151436|ref|YP_001405054.1| - 0.04 13.8 0.6 0.04 13.8 0.4 2.0 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-DNL PF05180.7 gi|154151436|ref|YP_001405054.1| - 0.042 13.5 1.2 0.13 12.0 0.9 1.8 1 0 0 1 1 1 0 DNL zinc finger Zn_Tnp_IS1595 PF12760.2 gi|154151436|ref|YP_001405054.1| - 0.046 13.5 1.7 0.11 12.2 1.2 1.7 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Lar_restr_allev PF14354.1 gi|154151436|ref|YP_001405054.1| - 0.11 12.8 3.2 0.16 12.2 0.6 2.2 2 0 0 2 2 2 0 Restriction alleviation protein Lar AbbA_antirepres PF14156.1 gi|154151436|ref|YP_001405054.1| - 0.15 11.7 0.0 0.31 10.7 0.0 1.4 1 0 0 1 1 1 0 Antirepressor AbbA DZR PF12773.2 gi|154151436|ref|YP_001405054.1| - 0.43 10.4 3.2 0.72 9.7 0.9 2.1 2 0 0 2 2 2 0 Double zinc ribbon zinc_ribbon_4 PF13717.1 gi|154151436|ref|YP_001405054.1| - 0.46 10.2 4.8 4.9 6.9 3.3 2.5 1 1 0 1 1 1 0 zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|154151436|ref|YP_001405054.1| - 0.48 9.7 3.2 16 4.8 0.0 2.8 3 0 0 3 3 3 0 zinc-ribbon domain Nudix_N_2 PF14803.1 gi|154151436|ref|YP_001405054.1| - 0.52 10.0 4.9 1.4 8.6 3.4 1.7 1 0 0 1 1 1 0 Nudix N-terminal zinc_ribbon_5 PF13719.1 gi|154151436|ref|YP_001405054.1| - 0.52 9.9 4.9 4.2 7.0 3.4 2.4 1 1 0 1 1 1 0 zinc-ribbon domain Zn-ribbon_8 PF09723.5 gi|154151436|ref|YP_001405054.1| - 0.7 9.8 5.9 0.89 9.5 2.5 2.3 2 1 0 2 2 2 0 Zinc ribbon domain DUF329 PF03884.9 gi|154151436|ref|YP_001405054.1| - 1.3 8.6 4.3 3.2 7.3 0.5 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF329) TFIIS_C PF01096.13 gi|154151436|ref|YP_001405054.1| - 1.8 8.2 4.5 6.4 6.4 0.1 2.6 3 0 0 3 3 2 0 Transcription factor S-II (TFIIS) Prok-RING_1 PF14446.1 gi|154151436|ref|YP_001405054.1| - 4.2 7.1 6.9 14 5.4 4.8 1.9 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 DNA_RNApol_7kD PF03604.8 gi|154151436|ref|YP_001405054.1| - 9.2 5.8 6.8 3.4 7.2 2.3 2.2 2 1 0 2 2 1 0 DNA directed RNA polymerase, 7 kDa subunit MacB_PCD PF12704.2 gi|154151437|ref|YP_001405055.1| - 0.011 15.3 0.9 0.011 15.3 0.6 1.6 1 1 1 2 2 2 0 MacB-like periplasmic core domain FKBP_C PF00254.23 gi|154151437|ref|YP_001405055.1| - 0.02 14.8 0.0 0.074 13.0 0.0 1.9 1 1 0 1 1 1 0 FKBP-type peptidyl-prolyl cis-trans isomerase VirB8 PF04335.8 gi|154151437|ref|YP_001405055.1| - 0.034 13.7 1.7 0.76 9.3 0.2 2.3 2 0 0 2 2 2 0 VirB8 protein DUF2306 PF10067.4 gi|154151437|ref|YP_001405055.1| - 0.076 13.1 0.4 0.14 12.3 0.3 1.4 1 0 0 1 1 1 0 Predicted membrane protein (DUF2306) CBS PF00571.23 gi|154151438|ref|YP_001405056.1| - 2.2e-23 81.7 1.9 3e-11 42.9 0.1 3.0 3 0 0 3 3 3 2 CBS domain ParBc PF02195.13 gi|154151438|ref|YP_001405056.1| - 3.9e-13 49.3 0.4 1.2e-12 47.7 0.3 1.8 1 0 0 1 1 1 1 ParB-like nuclease domain ParBc_2 PF08857.6 gi|154151438|ref|YP_001405056.1| - 0.0014 18.4 0.2 0.013 15.3 0.0 2.5 3 1 0 3 3 3 1 Putative ParB-like nuclease NTP_transferase PF00483.18 gi|154151439|ref|YP_001405057.1| - 5.3e-44 150.3 0.0 6.7e-44 150.0 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.19 gi|154151439|ref|YP_001405057.1| - 5.2e-16 57.3 20.2 1.6e-07 30.4 1.8 5.3 1 1 5 6 6 6 5 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.2 gi|154151439|ref|YP_001405057.1| - 1.8e-09 37.9 0.0 2.4e-09 37.4 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep_2 PF14602.1 gi|154151439|ref|YP_001405057.1| - 1.6e-07 30.7 16.7 9.1e-05 21.9 2.0 4.2 1 1 5 6 6 6 5 Hexapeptide repeat of succinyl-transferase Bactofilin PF04519.8 gi|154151439|ref|YP_001405057.1| - 0.044 13.7 0.9 0.1 12.6 0.4 1.7 1 1 0 1 1 1 0 Polymer-forming cytoskeletal Fucokinase PF07959.7 gi|154151439|ref|YP_001405057.1| - 0.12 10.9 2.1 0.36 9.3 0.4 2.1 1 1 2 3 3 3 0 L-fucokinase zf-dskA_traR PF01258.12 gi|154151440|ref|YP_001405058.1| - 4.5 7.1 10.7 0.38 10.5 1.3 2.9 3 1 1 4 4 4 0 Prokaryotic dksA/traR C4-type zinc finger GATase_3 PF07685.9 gi|154151441|ref|YP_001405059.1| - 2.9e-42 143.9 0.0 4.3e-42 143.3 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.18 gi|154151441|ref|YP_001405059.1| - 5.2e-24 84.7 0.0 7.4e-24 84.2 0.0 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.1 gi|154151441|ref|YP_001405059.1| - 4.7e-18 65.5 0.0 1.4e-17 63.9 0.0 1.7 1 1 0 1 1 1 1 AAA domain MobB PF03205.9 gi|154151441|ref|YP_001405059.1| - 7e-05 22.5 0.0 0.00037 20.2 0.0 2.0 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B GATase PF00117.23 gi|154151441|ref|YP_001405059.1| - 0.00073 19.0 0.0 0.0014 18.1 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase class-I DJ-1_PfpI PF01965.19 gi|154151441|ref|YP_001405059.1| - 0.029 13.8 0.0 0.068 12.6 0.0 1.6 1 0 0 1 1 1 0 DJ-1/PfpI family Peptidase_S51 PF03575.12 gi|154151441|ref|YP_001405059.1| - 0.08 12.6 0.0 0.13 11.9 0.0 1.3 1 0 0 1 1 1 0 Peptidase family S51 Peptidase_C26 PF07722.8 gi|154151441|ref|YP_001405059.1| - 0.12 11.7 0.0 0.23 10.9 0.0 1.4 1 0 0 1 1 1 0 Peptidase C26 SUI1 PF01253.17 gi|154151442|ref|YP_001405060.1| - 9.7e-25 86.1 0.5 1.1e-24 86.0 0.3 1.1 1 0 0 1 1 1 1 Translation initiation factor SUI1 DTW PF03942.10 gi|154151442|ref|YP_001405060.1| - 0.056 12.6 0.4 0.072 12.2 0.3 1.1 1 0 0 1 1 1 0 DTW domain T2SF PF00482.18 gi|154151443|ref|YP_001405061.1| - 3.4e-19 68.9 0.1 3.4e-19 68.9 0.0 2.4 3 0 0 3 3 3 1 Type II secretion system (T2SS), protein F TMEM154 PF15102.1 gi|154151443|ref|YP_001405061.1| - 1.3 8.7 4.8 2.6 7.7 0.2 2.8 3 0 0 3 3 3 0 TMEM154 protein family T2SF PF00482.18 gi|154151444|ref|YP_001405062.1| - 1.7e-13 50.5 1.0 1.7e-13 50.5 0.7 2.6 3 0 0 3 3 3 1 Type II secretion system (T2SS), protein F PEPcase_2 PF14010.1 gi|154151444|ref|YP_001405062.1| - 0.021 13.1 0.0 0.025 12.8 0.0 1.1 1 0 0 1 1 1 0 Phosphoenolpyruvate carboxylase T2SE PF00437.15 gi|154151446|ref|YP_001405064.1| - 4.8e-45 153.5 0.0 8e-45 152.8 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.1 gi|154151446|ref|YP_001405064.1| - 0.00046 19.6 0.0 0.0011 18.3 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_17 PF13207.1 gi|154151446|ref|YP_001405064.1| - 0.033 15.0 1.5 22 5.8 0.0 3.6 3 1 0 3 3 3 0 AAA domain EF-hand_6 PF13405.1 gi|154151446|ref|YP_001405064.1| - 0.06 13.2 0.3 4 7.5 0.0 3.3 4 0 0 4 4 4 0 EF-hand domain FtsK_SpoIIIE PF01580.13 gi|154151446|ref|YP_001405064.1| - 0.12 11.7 1.9 4 6.8 0.0 3.5 3 1 1 4 4 4 0 FtsK/SpoIIIE family Robl_LC7 PF03259.12 gi|154151447|ref|YP_001405065.1| - 0.00026 20.4 0.0 0.00055 19.4 0.0 1.6 1 0 0 1 1 1 1 Roadblock/LC7 domain Robl_LC7 PF03259.12 gi|154151448|ref|YP_001405066.1| - 9.2e-17 60.4 0.4 1.3e-16 59.9 0.3 1.2 1 0 0 1 1 1 1 Roadblock/LC7 domain MAPKK1_Int PF08923.5 gi|154151448|ref|YP_001405066.1| - 8.1e-05 22.2 0.0 9.9e-05 21.9 0.0 1.1 1 0 0 1 1 1 1 Mitogen-activated protein kinase kinase 1 interacting DUF1192 PF06698.6 gi|154151448|ref|YP_001405066.1| - 0.047 13.4 0.4 0.13 12.1 0.2 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1192) DUF4388 PF14332.1 gi|154151449|ref|YP_001405067.1| - 0.00055 19.7 0.0 0.00099 18.9 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4388) HAMP PF00672.20 gi|154151450|ref|YP_001405068.1| - 0.18 12.0 1.1 0.33 11.1 0.5 1.6 2 0 0 2 2 2 0 HAMP domain CbiA PF01656.18 gi|154151451|ref|YP_001405069.1| - 4.5e-28 97.9 1.1 5.5e-28 97.7 0.7 1.1 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.1 gi|154151451|ref|YP_001405069.1| - 6.1e-14 52.2 0.0 8.8e-14 51.7 0.0 1.2 1 0 0 1 1 1 1 AAA domain Fer4_NifH PF00142.13 gi|154151451|ref|YP_001405069.1| - 1.1e-09 37.8 3.7 1.6e-08 34.1 2.5 2.0 1 1 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family MipZ PF09140.6 gi|154151451|ref|YP_001405069.1| - 1.3e-06 27.7 0.8 1.1e-05 24.6 0.5 2.0 1 1 0 1 1 1 1 ATPase MipZ AAA_26 PF13500.1 gi|154151451|ref|YP_001405069.1| - 8.3e-06 25.5 1.1 8.3e-06 25.5 0.8 2.4 2 1 0 2 2 2 1 AAA domain YhjQ PF06564.7 gi|154151451|ref|YP_001405069.1| - 2.1e-05 23.9 0.0 0.00028 20.3 0.0 2.0 1 1 0 1 1 1 1 YhjQ protein ArsA_ATPase PF02374.10 gi|154151451|ref|YP_001405069.1| - 3.5e-05 23.0 1.3 3.5e-05 23.0 0.9 1.6 2 0 0 2 2 2 1 Anion-transporting ATPase VirC1 PF07015.6 gi|154151451|ref|YP_001405069.1| - 0.0027 16.8 0.4 0.0044 16.1 0.3 1.2 1 0 0 1 1 1 1 VirC1 protein APS_kinase PF01583.15 gi|154151451|ref|YP_001405069.1| - 0.0071 16.0 0.3 0.013 15.1 0.2 1.4 1 0 0 1 1 1 1 Adenylylsulphate kinase ParA PF10609.4 gi|154151451|ref|YP_001405069.1| - 0.01 15.6 1.6 0.04 13.8 0.3 2.2 1 1 1 2 2 2 0 ParA/MinD ATPase like FTHFS PF01268.14 gi|154151451|ref|YP_001405069.1| - 0.076 10.9 0.7 0.11 10.4 0.5 1.3 1 0 0 1 1 1 0 Formate--tetrahydrofolate ligase AAA_17 PF13207.1 gi|154151451|ref|YP_001405069.1| - 0.12 13.1 0.0 0.4 11.5 0.0 1.9 1 1 0 1 1 1 0 AAA domain SRP54 PF00448.17 gi|154151451|ref|YP_001405069.1| - 1.1 8.5 4.0 0.59 9.5 1.1 1.7 2 1 0 2 2 2 0 SRP54-type protein, GTPase domain Response_reg PF00072.19 gi|154151452|ref|YP_001405070.1| - 2e-20 72.8 0.1 3.6e-20 72.0 0.1 1.4 1 0 0 1 1 1 1 Response regulator receiver domain PAS_9 PF13426.1 gi|154151452|ref|YP_001405070.1| - 2.5e-07 31.0 0.0 4.9e-07 30.0 0.0 1.5 1 0 0 1 1 1 1 PAS domain PAS_4 PF08448.5 gi|154151452|ref|YP_001405070.1| - 0.00054 19.9 0.0 0.00095 19.1 0.0 1.3 1 0 0 1 1 1 1 PAS fold PAS PF00989.19 gi|154151452|ref|YP_001405070.1| - 0.0044 16.7 0.0 0.017 14.8 0.0 2.0 1 1 0 1 1 1 1 PAS fold PAS_8 PF13188.1 gi|154151452|ref|YP_001405070.1| - 0.035 13.9 0.0 0.085 12.7 0.0 1.7 1 0 0 1 1 1 0 PAS domain V4R PF02830.13 gi|154151453|ref|YP_001405071.1| - 2.1e-24 85.1 10.3 1.1e-12 47.5 1.9 2.3 2 0 0 2 2 2 2 V4R domain ATC_hydrolase PF14196.1 gi|154151453|ref|YP_001405071.1| - 0.014 15.8 9.5 1.1 9.6 0.6 3.4 2 2 0 2 2 2 0 L-2-amino-thiazoline-4-carboxylic acid hydrolase MG1 PF11974.3 gi|154151454|ref|YP_001405072.1| - 0.053 14.0 0.0 0.1 13.1 0.0 1.4 1 0 0 1 1 1 0 Alpha-2-macroglobulin MG1 domain Peptidase_C25_C PF03785.9 gi|154151454|ref|YP_001405072.1| - 0.066 13.0 0.1 0.28 10.9 0.0 2.1 2 0 0 2 2 2 0 Peptidase family C25, C terminal ig-like domain Arc_PepC_II PF06847.6 gi|154151455|ref|YP_001405073.1| - 4.4e-19 68.6 0.0 4.3e-18 65.5 0.0 2.5 1 1 0 1 1 1 1 Archaeal Peptidase A24 C-terminus Type II Peptidase_A24 PF01478.13 gi|154151455|ref|YP_001405073.1| - 1.2e-07 31.8 20.5 4.3e-06 26.8 2.7 3.0 2 1 0 2 2 2 2 Type IV leader peptidase family Viral_Beta_CD PF04530.7 gi|154151455|ref|YP_001405073.1| - 0.35 11.0 1.7 3.9 7.6 0.0 3.0 2 1 1 4 4 4 0 Viral Beta C/D like family DUF1212 PF06738.7 gi|154151455|ref|YP_001405073.1| - 6.1 6.2 15.2 2 7.8 0.1 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF1212) PRA-CH PF01502.13 gi|154151456|ref|YP_001405074.1| - 1.7e-36 123.7 1.1 2e-36 123.4 0.8 1.1 1 0 0 1 1 1 1 Phosphoribosyl-AMP cyclohydrolase PBP_like_2 PF12849.2 gi|154151457|ref|YP_001405075.1| - 1.1e-40 139.9 15.7 1.1e-40 139.9 10.9 1.8 1 1 1 2 2 2 1 PBP superfamily domain PBP_like PF12727.2 gi|154151457|ref|YP_001405075.1| - 1.3e-20 73.2 0.5 2.1e-20 72.5 0.3 1.3 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_11 PF13531.1 gi|154151457|ref|YP_001405075.1| - 9.3e-11 41.7 2.5 9.3e-11 41.7 1.7 2.5 1 1 1 2 2 2 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.20 gi|154151457|ref|YP_001405075.1| - 0.00015 21.6 2.3 0.03 14.0 1.6 2.5 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein DUF1180 PF06679.7 gi|154151457|ref|YP_001405075.1| - 0.024 14.5 9.0 0.046 13.5 6.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) SBP_bac_6 PF13343.1 gi|154151457|ref|YP_001405075.1| - 0.033 13.5 0.2 0.13 11.5 0.0 2.1 2 1 1 3 3 3 0 Bacterial extracellular solute-binding protein QRPTase_C PF01729.14 gi|154151457|ref|YP_001405075.1| - 0.054 13.0 0.6 1.7 8.1 0.1 2.4 2 0 0 2 2 2 0 Quinolinate phosphoribosyl transferase, C-terminal domain LysR_substrate PF03466.15 gi|154151457|ref|YP_001405075.1| - 0.085 11.9 0.0 0.25 10.4 0.0 1.7 2 0 0 2 2 2 0 LysR substrate binding domain BPD_transp_1 PF00528.17 gi|154151458|ref|YP_001405076.1| - 4.1e-50 169.8 54.1 4.3e-27 94.8 9.7 3.6 3 1 0 3 3 3 2 Binding-protein-dependent transport system inner membrane component COX7C PF02935.11 gi|154151458|ref|YP_001405076.1| - 4.8 7.0 6.1 6.6 6.6 0.2 3.2 3 1 0 3 3 3 0 Cytochrome c oxidase subunit VIIc ABC_tran PF00005.22 gi|154151459|ref|YP_001405077.1| - 9.9e-30 103.6 0.0 1.3e-29 103.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|154151459|ref|YP_001405077.1| - 2.7e-14 53.8 0.0 1.5e-07 31.7 0.0 2.2 2 0 0 2 2 2 2 AAA domain SMC_N PF02463.14 gi|154151459|ref|YP_001405077.1| - 8.1e-08 31.7 0.0 9.6e-06 24.9 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain DUF258 PF03193.11 gi|154151459|ref|YP_001405077.1| - 7.9e-06 25.1 0.0 1.7e-05 24.0 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_29 PF13555.1 gi|154151459|ref|YP_001405077.1| - 2.1e-05 23.9 0.0 4.2e-05 22.9 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.1 gi|154151459|ref|YP_001405077.1| - 0.00021 21.3 0.0 0.0031 17.5 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.1 gi|154151459|ref|YP_001405077.1| - 0.00022 21.3 0.1 0.00069 19.7 0.1 2.0 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.1 gi|154151459|ref|YP_001405077.1| - 0.00088 19.6 0.0 0.0017 18.7 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.1 gi|154151459|ref|YP_001405077.1| - 0.0011 18.1 0.4 0.53 9.2 0.0 2.1 2 0 0 2 2 2 2 AAA ATPase domain AAA_13 PF13166.1 gi|154151459|ref|YP_001405077.1| - 0.0011 17.5 0.0 0.098 11.1 0.0 2.1 2 0 0 2 2 2 1 AAA domain Arch_ATPase PF01637.13 gi|154151459|ref|YP_001405077.1| - 0.0089 15.7 0.0 0.085 12.5 0.0 2.0 2 0 0 2 2 2 1 Archaeal ATPase Rad17 PF03215.10 gi|154151459|ref|YP_001405077.1| - 0.02 13.5 0.0 0.029 13.0 0.0 1.2 1 0 0 1 1 1 0 Rad17 cell cycle checkpoint protein AAA_18 PF13238.1 gi|154151459|ref|YP_001405077.1| - 0.022 15.0 0.0 0.054 13.8 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_10 PF12846.2 gi|154151459|ref|YP_001405077.1| - 0.022 14.1 0.0 0.079 12.3 0.0 1.8 2 1 0 2 2 2 0 AAA-like domain AAA PF00004.24 gi|154151459|ref|YP_001405077.1| - 0.055 13.6 0.0 0.85 9.8 0.0 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.1 gi|154151459|ref|YP_001405077.1| - 0.055 13.3 0.0 0.16 11.9 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.1 gi|154151459|ref|YP_001405077.1| - 0.079 12.8 0.1 0.14 11.9 0.0 1.9 1 1 0 1 1 1 0 AAA domain AAA_17 PF13207.1 gi|154151459|ref|YP_001405077.1| - 0.097 13.4 0.5 0.18 12.6 0.4 1.8 1 1 0 1 1 1 0 AAA domain NACHT PF05729.7 gi|154151459|ref|YP_001405077.1| - 0.13 11.9 0.0 0.23 11.1 0.0 1.4 1 0 0 1 1 1 0 NACHT domain AAA_25 PF13481.1 gi|154151459|ref|YP_001405077.1| - 0.14 11.5 0.1 0.74 9.1 0.0 1.9 2 0 0 2 2 2 0 AAA domain PhoU PF01895.14 gi|154151460|ref|YP_001405078.1| - 3e-28 98.0 7.5 1.4e-15 57.4 0.9 2.1 2 0 0 2 2 2 2 PhoU domain STAT_alpha PF01017.15 gi|154151460|ref|YP_001405078.1| - 0.0089 15.7 0.1 0.016 14.9 0.1 1.3 1 0 0 1 1 1 1 STAT protein, all-alpha domain Cupredoxin_1 PF13473.1 gi|154151461|ref|YP_001405079.1| - 3.7e-08 33.1 0.0 4.7e-08 32.8 0.0 1.2 1 0 0 1 1 1 1 Cupredoxin-like domain Copper-bind PF00127.15 gi|154151461|ref|YP_001405079.1| - 0.0002 21.5 0.2 0.0011 19.1 0.2 1.9 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family DUF4352 PF11611.3 gi|154151462|ref|YP_001405080.1| - 5.5e-19 68.5 0.0 7.1e-19 68.1 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4352) DUF3309 PF11752.3 gi|154151462|ref|YP_001405080.1| - 0.014 15.1 4.0 0.014 15.1 2.7 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3309) DUF1035 PF06281.7 gi|154151462|ref|YP_001405080.1| - 0.97 9.2 7.2 0.22 11.3 1.9 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF1035) T2SE PF00437.15 gi|154151463|ref|YP_001405081.1| - 3.8e-14 52.2 0.1 6.8e-14 51.4 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein PIN PF01850.16 gi|154151463|ref|YP_001405081.1| - 8.9e-06 26.0 0.1 2.5e-05 24.5 0.0 1.9 2 0 0 2 2 1 1 PIN domain KH_1 PF00013.24 gi|154151463|ref|YP_001405081.1| - 1.6e-05 24.4 1.7 4.4e-05 23.0 1.1 1.9 1 0 0 1 1 1 1 KH domain IstB_IS21 PF01695.12 gi|154151463|ref|YP_001405081.1| - 5.5e-05 22.6 0.0 0.00011 21.7 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_30 PF13604.1 gi|154151463|ref|YP_001405081.1| - 0.0011 18.5 0.0 0.0033 17.0 0.0 1.7 1 0 0 1 1 1 1 AAA domain NTPase_1 PF03266.10 gi|154151463|ref|YP_001405081.1| - 0.0013 18.5 0.0 0.014 15.0 0.0 2.4 2 0 0 2 2 2 1 NTPase PIN_4 PF13638.1 gi|154151463|ref|YP_001405081.1| - 0.0013 18.8 0.0 0.0027 17.7 0.0 1.6 1 0 0 1 1 1 1 PIN domain AAA_25 PF13481.1 gi|154151463|ref|YP_001405081.1| - 0.0014 18.0 0.4 0.0057 16.0 0.1 2.0 1 1 1 2 2 2 1 AAA domain Zeta_toxin PF06414.7 gi|154151463|ref|YP_001405081.1| - 0.0015 17.6 0.0 0.0037 16.3 0.0 1.7 1 0 0 1 1 1 1 Zeta toxin AAA_19 PF13245.1 gi|154151463|ref|YP_001405081.1| - 0.0032 17.1 0.0 0.0079 15.9 0.0 1.7 1 0 0 1 1 1 1 Part of AAA domain KH_2 PF07650.12 gi|154151463|ref|YP_001405081.1| - 0.0045 16.5 2.0 0.018 14.6 1.4 2.0 1 0 0 1 1 1 1 KH domain AAA_5 PF07728.9 gi|154151463|ref|YP_001405081.1| - 0.0063 16.2 0.0 0.013 15.2 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_17 PF13207.1 gi|154151463|ref|YP_001405081.1| - 0.012 16.4 0.0 0.042 14.6 0.0 2.1 2 0 0 2 2 1 0 AAA domain AAA_18 PF13238.1 gi|154151463|ref|YP_001405081.1| - 0.012 15.9 0.0 0.035 14.4 0.0 1.9 1 0 0 1 1 1 0 AAA domain AAA PF00004.24 gi|154151463|ref|YP_001405081.1| - 0.014 15.6 0.0 0.032 14.4 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.1 gi|154151463|ref|YP_001405081.1| - 0.016 15.1 0.0 0.03 14.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain NACHT PF05729.7 gi|154151463|ref|YP_001405081.1| - 0.02 14.5 0.0 0.037 13.6 0.0 1.4 1 0 0 1 1 1 0 NACHT domain AAA_14 PF13173.1 gi|154151463|ref|YP_001405081.1| - 0.023 14.6 0.0 0.057 13.3 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.1 gi|154151463|ref|YP_001405081.1| - 0.027 14.4 0.0 0.056 13.4 0.0 1.6 1 0 0 1 1 1 0 AAA domain Viral_helicase1 PF01443.13 gi|154151463|ref|YP_001405081.1| - 0.03 13.8 0.0 0.063 12.7 0.0 1.5 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase ABC_tran PF00005.22 gi|154151463|ref|YP_001405081.1| - 0.038 14.2 0.0 0.12 12.7 0.0 1.9 1 0 0 1 1 1 0 ABC transporter Thymidylate_kin PF02223.12 gi|154151463|ref|YP_001405081.1| - 0.039 13.3 0.0 0.13 11.6 0.0 1.9 1 1 1 2 2 2 0 Thymidylate kinase Mg_chelatase PF01078.16 gi|154151463|ref|YP_001405081.1| - 0.042 13.0 0.0 0.092 11.8 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_16 PF13191.1 gi|154151463|ref|YP_001405081.1| - 0.047 13.6 0.0 0.12 12.2 0.0 1.7 1 0 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.1 gi|154151463|ref|YP_001405081.1| - 0.059 13.5 0.0 0.2 11.7 0.0 1.9 2 0 0 2 2 1 0 AAA domain tRNA-synt_1 PF00133.17 gi|154151464|ref|YP_001405082.1| - 4.1e-50 170.4 0.0 1.9e-43 148.3 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.6 gi|154151464|ref|YP_001405082.1| - 4.4e-26 91.4 0.3 9e-10 37.7 0.0 4.1 3 1 0 3 3 3 3 tRNA synthetases class I (M) Anticodon_1 PF08264.8 gi|154151464|ref|YP_001405082.1| - 1.1e-22 80.4 0.3 2.6e-22 79.2 0.2 1.6 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1_2 PF13603.1 gi|154151464|ref|YP_001405082.1| - 8.7e-07 28.4 0.0 2e-06 27.2 0.0 1.5 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1e PF01406.14 gi|154151464|ref|YP_001405082.1| - 5.4e-06 25.7 0.0 0.045 12.8 0.0 2.5 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.13 gi|154151464|ref|YP_001405082.1| - 5.8e-05 21.9 0.0 0.046 12.3 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (K) tRNA-synt_1d PF00750.14 gi|154151464|ref|YP_001405082.1| - 0.0053 15.6 0.0 0.078 11.7 0.0 2.2 2 0 0 2 2 2 1 tRNA synthetases class I (R) tRNA-synt_1b PF00579.20 gi|154151464|ref|YP_001405082.1| - 0.038 13.1 0.1 0.13 11.3 0.0 1.9 2 0 0 2 2 2 0 tRNA synthetases class I (W and Y) CxxCxxCC PF03692.10 gi|154151465|ref|YP_001405083.1| - 1.3e-09 38.3 1.8 4e-09 36.8 1.2 1.8 1 1 0 1 1 1 1 Putative zinc- or iron-chelating domain PAC2 PF09754.4 gi|154151467|ref|YP_001405085.1| - 5.4e-38 131.0 0.0 6.5e-38 130.7 0.0 1.0 1 0 0 1 1 1 1 PAC2 family Sigma70_r1_2 PF00140.15 gi|154151467|ref|YP_001405085.1| - 0.17 11.5 1.3 9 6.0 0.0 2.3 2 0 0 2 2 2 0 Sigma-70 factor, region 1.2 DUF473 PF04322.7 gi|154151468|ref|YP_001405086.1| - 2.2e-41 140.2 0.0 2.5e-41 140.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF473) KH_2 PF07650.12 gi|154151469|ref|YP_001405087.1| - 2.6e-20 71.7 1.8 2.7e-14 52.4 0.1 2.1 1 1 1 2 2 2 2 KH domain KH_5 PF13184.1 gi|154151469|ref|YP_001405087.1| - 3.4e-12 45.9 0.4 1.2e-11 44.2 0.0 2.0 2 1 0 2 2 2 1 NusA-like KH domain KH_1 PF00013.24 gi|154151469|ref|YP_001405087.1| - 3.6e-07 29.7 0.1 0.00048 19.7 0.0 2.5 2 0 0 2 2 2 2 KH domain KH_4 PF13083.1 gi|154151469|ref|YP_001405087.1| - 8.7e-07 28.4 0.0 0.045 13.4 0.0 2.4 2 0 0 2 2 2 2 KH domain Mesd PF10185.4 gi|154151469|ref|YP_001405087.1| - 0.015 14.9 0.1 0.049 13.3 0.0 1.7 2 0 0 2 2 2 0 Chaperone for wingless signalling and trafficking of LDL receptor Ribosomal_L7Ae PF01248.21 gi|154151470|ref|YP_001405088.1| - 1e-16 60.1 0.0 1.4e-16 59.7 0.0 1.2 1 1 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family RNA_pol_Rpb1_5 PF04998.12 gi|154151471|ref|YP_001405089.1| - 7e-54 182.9 2.2 1e-53 182.4 1.6 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 DUF1828 PF08861.5 gi|154151471|ref|YP_001405089.1| - 0.18 11.4 1.3 0.41 10.3 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function DUF1828 RNA_pol_Rpb1_1 PF04997.7 gi|154151472|ref|YP_001405090.1| - 1.3e-86 290.9 1.0 1.2e-85 287.7 0.0 2.5 2 1 0 2 2 2 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.15 gi|154151472|ref|YP_001405090.1| - 5.1e-63 211.9 0.0 7.8e-63 211.3 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_4 PF05000.12 gi|154151472|ref|YP_001405090.1| - 6.3e-32 109.5 0.0 1.1e-31 108.7 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 RNA_pol_Rpb1_5 PF04998.12 gi|154151472|ref|YP_001405090.1| - 1.1e-30 106.8 0.1 2.6e-30 105.6 0.1 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_3 PF04983.13 gi|154151472|ref|YP_001405090.1| - 1.8e-30 105.7 0.0 3.9e-30 104.6 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 zf-ribbon_3 PF13248.1 gi|154151472|ref|YP_001405090.1| - 0.001 18.2 0.3 0.001 18.2 0.2 2.4 2 1 0 2 2 2 1 zinc-ribbon domain DUF4062 PF13271.1 gi|154151472|ref|YP_001405090.1| - 0.04 13.9 0.0 0.11 12.5 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4062) LIM PF00412.17 gi|154151472|ref|YP_001405090.1| - 0.072 13.1 0.2 0.072 13.1 0.2 2.4 3 0 0 3 3 3 0 LIM domain zf-ISL3 PF14690.1 gi|154151472|ref|YP_001405090.1| - 0.085 12.8 0.1 0.085 12.8 0.1 2.8 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 RNA_pol_Rpb2_6 PF00562.23 gi|154151473|ref|YP_001405091.1| - 4.2e-127 424.0 0.0 5.4e-127 423.7 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_7 PF04560.15 gi|154151473|ref|YP_001405091.1| - 1.8e-29 101.8 0.3 3.5e-29 100.8 0.2 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_4 PF04566.8 gi|154151473|ref|YP_001405091.1| - 4.2e-20 71.3 0.2 8.9e-20 70.2 0.1 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 4 RNA_pol_Rpb2_5 PF04567.12 gi|154151473|ref|YP_001405091.1| - 8.5e-14 51.2 0.1 1.8e-13 50.2 0.1 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 5 RNA_pol_Rpb2_1 PF04563.10 gi|154151474|ref|YP_001405092.1| - 4.3e-54 182.5 0.0 5.3e-54 182.2 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_3 PF04565.11 gi|154151474|ref|YP_001405092.1| - 2.2e-24 85.0 0.0 4e-24 84.1 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb2_2 PF04561.9 gi|154151474|ref|YP_001405092.1| - 2.7e-18 66.0 0.3 1.4e-17 63.7 0.2 2.0 1 1 0 1 1 1 1 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb5_C PF01191.14 gi|154151475|ref|YP_001405093.1| - 3.5e-30 103.3 0.9 3.9e-30 103.2 0.6 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain DUF3562 PF12085.3 gi|154151475|ref|YP_001405093.1| - 0.028 14.2 0.2 0.038 13.8 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3562) Response_reg PF00072.19 gi|154151476|ref|YP_001405094.1| - 3.1e-23 81.9 0.1 5.5e-23 81.1 0.0 1.4 1 0 0 1 1 1 1 Response regulator receiver domain Response_reg PF00072.19 gi|154151477|ref|YP_001405095.1| - 5.4e-23 81.1 0.1 1.1e-22 80.1 0.0 1.5 2 0 0 2 2 2 1 Response regulator receiver domain ECH PF00378.15 gi|154151477|ref|YP_001405095.1| - 0.089 11.9 0.0 0.49 9.4 0.0 2.0 1 1 0 1 1 1 0 Enoyl-CoA hydratase/isomerase family Robl_LC7 PF03259.12 gi|154151478|ref|YP_001405096.1| - 1e-06 28.1 0.2 1.4e-06 27.7 0.1 1.2 1 0 0 1 1 1 1 Roadblock/LC7 domain NapD PF03927.8 gi|154151478|ref|YP_001405096.1| - 0.082 12.7 0.1 0.23 11.3 0.0 1.7 2 0 0 2 2 2 0 NapD protein DUF2304 PF10066.4 gi|154151479|ref|YP_001405097.1| - 0.011 15.5 1.5 0.013 15.3 1.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2304) INT_SG_DDX_CT_C PF15300.1 gi|154151479|ref|YP_001405097.1| - 0.038 13.4 0.1 0.051 13.0 0.1 1.3 1 1 0 1 1 1 0 INTS6/SAGE1/DDX26B/CT45 C-terminus Imm3 PF14425.1 gi|154151479|ref|YP_001405097.1| - 0.12 12.3 0.8 0.13 12.2 0.5 1.0 1 0 0 1 1 1 0 Immunity protein Imm3 DUF89 PF01937.14 gi|154151480|ref|YP_001405098.1| - 1.5e-47 162.1 0.0 1.7e-47 161.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF89 PFK PF00365.15 gi|154151481|ref|YP_001405099.1| - 4.8e-93 311.1 11.7 2e-91 305.8 8.1 2.1 1 1 0 1 1 1 1 Phosphofructokinase NAD_kinase PF01513.16 gi|154151481|ref|YP_001405099.1| - 0.019 13.7 0.4 0.03 13.0 0.3 1.3 1 1 0 1 1 1 0 ATP-NAD kinase Radical_SAM PF04055.16 gi|154151481|ref|YP_001405099.1| - 0.04 14.0 0.1 0.26 11.4 0.1 2.2 1 1 0 1 1 1 0 Radical SAM superfamily Peptidase_M50 PF02163.17 gi|154151482|ref|YP_001405100.1| - 2.9e-26 91.6 0.0 2.5e-25 88.5 0.0 2.3 2 1 0 2 2 2 1 Peptidase family M50 PDZ_2 PF13180.1 gi|154151482|ref|YP_001405100.1| - 1e-09 38.1 0.0 1.6e-09 37.5 0.0 1.3 1 0 0 1 1 1 1 PDZ domain PDZ PF00595.19 gi|154151482|ref|YP_001405100.1| - 0.0014 18.7 0.0 0.0026 17.9 0.0 1.4 1 0 0 1 1 1 1 PDZ domain (Also known as DHR or GLGF) Tricorn_PDZ PF14685.1 gi|154151482|ref|YP_001405100.1| - 0.02 14.6 0.0 0.036 13.8 0.0 1.4 1 0 0 1 1 1 0 Tricorn protease PDZ domain RNase_HII PF01351.13 gi|154151483|ref|YP_001405101.1| - 2.4e-42 144.8 0.0 2.8e-42 144.6 0.0 1.0 1 0 0 1 1 1 1 Ribonuclease HII HTH_38 PF13936.1 gi|154151483|ref|YP_001405101.1| - 0.11 12.0 0.0 0.32 10.5 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain TrkA_N PF02254.13 gi|154151484|ref|YP_001405102.1| - 1.1e-30 106.0 0.4 1.8e-30 105.3 0.2 1.4 2 0 0 2 2 1 1 TrkA-N domain TrkA_C PF02080.16 gi|154151484|ref|YP_001405102.1| - 1.5e-14 53.3 0.3 1.2e-13 50.4 0.0 2.3 2 0 0 2 2 2 1 TrkA-C domain NAD_binding_7 PF13241.1 gi|154151484|ref|YP_001405102.1| - 1.5e-06 28.4 0.1 2.9e-06 27.4 0.1 1.5 1 0 0 1 1 1 1 Putative NAD(P)-binding F420_oxidored PF03807.12 gi|154151484|ref|YP_001405102.1| - 2.2e-06 27.9 0.3 1.4e-05 25.4 0.1 2.3 2 1 0 3 3 3 1 NADP oxidoreductase coenzyme F420-dependent Saccharop_dh PF03435.13 gi|154151484|ref|YP_001405102.1| - 9e-06 24.8 0.0 1e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 Saccharopine dehydrogenase NAD_binding_2 PF03446.10 gi|154151484|ref|YP_001405102.1| - 5.8e-05 23.0 0.1 0.0002 21.2 0.0 1.8 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase XdhC_C PF13478.1 gi|154151484|ref|YP_001405102.1| - 0.00041 20.6 0.0 0.00066 20.0 0.0 1.3 1 0 0 1 1 1 1 XdhC Rossmann domain ApbA PF02558.11 gi|154151484|ref|YP_001405102.1| - 0.0012 18.3 0.1 0.056 12.8 0.0 2.6 3 0 0 3 3 3 1 Ketopantoate reductase PanE/ApbA NAD_binding_10 PF13460.1 gi|154151484|ref|YP_001405102.1| - 0.0021 18.0 0.2 0.0038 17.2 0.1 1.4 2 0 0 2 2 1 1 NADH(P)-binding 3HCDH_N PF02737.13 gi|154151484|ref|YP_001405102.1| - 0.0025 17.4 0.1 0.004 16.8 0.0 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.9 gi|154151484|ref|YP_001405102.1| - 0.0036 16.6 0.1 0.0061 15.9 0.1 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain adh_short PF00106.20 gi|154151484|ref|YP_001405102.1| - 0.0063 16.4 0.5 0.013 15.4 0.3 1.6 1 1 0 1 1 1 1 short chain dehydrogenase DAO PF01266.19 gi|154151484|ref|YP_001405102.1| - 0.0073 15.2 0.1 0.011 14.7 0.1 1.4 1 0 0 1 1 1 1 FAD dependent oxidoreductase KR PF08659.5 gi|154151484|ref|YP_001405102.1| - 0.034 13.8 0.0 0.045 13.4 0.0 1.3 1 0 0 1 1 1 0 KR domain Gp_dh_N PF00044.19 gi|154151484|ref|YP_001405102.1| - 0.034 14.1 0.0 0.053 13.4 0.0 1.4 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.14 gi|154151484|ref|YP_001405102.1| - 0.045 12.9 0.1 0.077 12.1 0.0 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Shikimate_DH PF01488.15 gi|154151484|ref|YP_001405102.1| - 0.049 13.7 0.1 0.074 13.1 0.0 1.4 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase 3Beta_HSD PF01073.14 gi|154151484|ref|YP_001405102.1| - 0.085 11.5 0.3 0.12 11.0 0.2 1.2 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family CPSase_L_chain PF00289.17 gi|154151484|ref|YP_001405102.1| - 0.13 12.3 0.1 0.27 11.3 0.0 1.6 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, N-terminal domain FAD_binding_3 PF01494.14 gi|154151485|ref|YP_001405103.1| - 1.1e-15 57.5 2.2 4.4e-07 29.2 0.1 2.7 2 1 0 2 2 2 2 FAD binding domain DAO PF01266.19 gi|154151485|ref|YP_001405103.1| - 8.4e-11 41.3 3.0 1.4e-06 27.4 0.5 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_oxidored PF12831.2 gi|154151485|ref|YP_001405103.1| - 1.7e-10 40.6 4.5 5.7e-09 35.5 3.1 2.6 2 1 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.19 gi|154151485|ref|YP_001405103.1| - 6.2e-10 38.4 2.4 1.2e-07 30.9 1.1 2.8 2 1 0 2 2 2 2 FAD binding domain HI0933_like PF03486.9 gi|154151485|ref|YP_001405103.1| - 9.2e-08 30.9 0.8 1.5e-07 30.2 0.5 1.3 1 0 0 1 1 1 1 HI0933-like protein Lycopene_cycl PF05834.7 gi|154151485|ref|YP_001405103.1| - 1.4e-07 30.7 0.2 5e-06 25.6 0.2 2.5 2 1 0 2 2 2 1 Lycopene cyclase protein NAD_binding_8 PF13450.1 gi|154151485|ref|YP_001405103.1| - 5.4e-07 29.5 1.0 4.3e-06 26.6 0.5 2.4 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Trp_halogenase PF04820.9 gi|154151485|ref|YP_001405103.1| - 4.6e-06 25.5 0.2 0.042 12.4 0.1 2.5 2 1 0 2 2 2 2 Tryptophan halogenase Pyr_redox_2 PF07992.9 gi|154151485|ref|YP_001405103.1| - 7.3e-06 26.0 5.5 1.7e-05 24.7 4.0 1.7 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.12 gi|154151485|ref|YP_001405103.1| - 3.3e-05 23.0 0.3 9.7e-05 21.5 0.1 1.8 2 0 0 2 2 2 1 Thi4 family GIDA PF01134.17 gi|154151485|ref|YP_001405103.1| - 0.00011 21.2 1.9 0.00011 21.2 1.3 1.6 2 1 0 2 2 2 1 Glucose inhibited division protein A Pyr_redox PF00070.22 gi|154151485|ref|YP_001405103.1| - 0.031 14.6 0.3 0.096 13.0 0.2 1.9 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|154151485|ref|YP_001405103.1| - 0.11 12.5 0.1 0.17 11.8 0.1 1.5 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Fer4 PF00037.22 gi|154151486|ref|YP_001405104.1| - 3.2e-13 48.6 16.6 3e-07 29.7 2.1 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.2 gi|154151486|ref|YP_001405104.1| - 9.3e-09 34.7 15.9 2.2e-05 24.1 1.7 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.1 gi|154151486|ref|YP_001405104.1| - 1.3e-08 35.3 11.5 0.00023 21.8 1.3 2.0 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.1 gi|154151486|ref|YP_001405104.1| - 5.5e-08 32.4 11.8 6.7e-08 32.2 8.2 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|154151486|ref|YP_001405104.1| - 1.3e-07 31.7 11.7 0.00013 22.1 0.5 2.0 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|154151486|ref|YP_001405104.1| - 1.4e-07 31.7 31.6 2e-06 28.1 11.7 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|154151486|ref|YP_001405104.1| - 6.7e-07 28.8 16.5 0.00022 20.9 1.2 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.1 gi|154151486|ref|YP_001405104.1| - 1.9e-06 27.6 15.1 5.6e-06 26.1 10.5 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|154151486|ref|YP_001405104.1| - 2.9e-05 23.9 27.5 0.0022 18.0 11.4 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|154151486|ref|YP_001405104.1| - 0.00011 22.2 18.9 0.0031 17.7 2.2 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_15 PF13459.1 gi|154151486|ref|YP_001405104.1| - 0.00049 20.6 11.6 0.1 13.1 2.1 2.1 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_3 PF12798.2 gi|154151486|ref|YP_001405104.1| - 0.0023 18.3 23.7 0.045 14.3 4.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.1 gi|154151486|ref|YP_001405104.1| - 0.003 17.8 17.1 0.049 13.9 2.4 2.1 1 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.1 gi|154151486|ref|YP_001405104.1| - 0.016 15.5 15.2 0.037 14.4 2.2 2.1 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_18 PF13746.1 gi|154151486|ref|YP_001405104.1| - 0.031 14.6 3.4 0.031 14.6 2.3 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Gln-synt_C PF00120.19 gi|154151487|ref|YP_001405105.1| - 6.5e-104 346.6 0.0 7.9e-104 346.3 0.0 1.1 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.14 gi|154151487|ref|YP_001405105.1| - 1.7e-25 88.4 0.1 4.6e-25 87.0 0.0 1.8 2 0 0 2 2 2 1 Glutamine synthetase, beta-Grasp domain PHP_C PF13263.1 gi|154151488|ref|YP_001405106.1| - 4.5e-06 26.0 0.0 1e-05 24.9 0.0 1.6 1 0 0 1 1 1 1 PHP-associated PHP PF02811.14 gi|154151488|ref|YP_001405106.1| - 0.0022 17.7 0.0 0.0033 17.2 0.0 1.2 1 0 0 1 1 1 1 PHP domain TPR_11 PF13414.1 gi|154151489|ref|YP_001405107.1| - 6e-24 83.4 0.1 8.3e-11 41.3 0.0 4.0 2 1 2 4 4 4 3 TPR repeat PAS_9 PF13426.1 gi|154151489|ref|YP_001405107.1| - 3.3e-23 82.0 0.0 6.6e-23 81.0 0.0 1.5 1 0 0 1 1 1 1 PAS domain TPR_2 PF07719.12 gi|154151489|ref|YP_001405107.1| - 4.7e-21 72.9 0.4 4.9e-07 29.1 0.0 5.1 5 1 1 6 6 5 3 Tetratricopeptide repeat Response_reg PF00072.19 gi|154151489|ref|YP_001405107.1| - 8.6e-21 74.0 0.2 3.2e-20 72.2 0.1 1.9 2 0 0 2 2 2 1 Response regulator receiver domain TPR_1 PF00515.23 gi|154151489|ref|YP_001405107.1| - 1.4e-20 71.9 0.0 2.9e-06 26.6 0.0 4.7 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_12 PF13424.1 gi|154151489|ref|YP_001405107.1| - 7e-18 64.3 0.0 1.7e-06 27.8 0.0 3.0 2 1 2 4 4 3 3 Tetratricopeptide repeat TPR_17 PF13431.1 gi|154151489|ref|YP_001405107.1| - 1.7e-15 55.8 0.4 6.6e-05 22.7 0.0 4.5 6 0 0 6 6 3 3 Tetratricopeptide repeat TPR_8 PF13181.1 gi|154151489|ref|YP_001405107.1| - 2.4e-15 55.0 0.1 0.00012 21.5 0.0 4.7 3 1 1 4 4 4 3 Tetratricopeptide repeat TPR_16 PF13432.1 gi|154151489|ref|YP_001405107.1| - 4.6e-13 49.4 0.0 2e-07 31.4 0.1 3.5 1 1 1 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.1 gi|154151489|ref|YP_001405107.1| - 3.8e-11 43.1 0.0 5.4e-05 23.4 0.0 3.6 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_14 PF13428.1 gi|154151489|ref|YP_001405107.1| - 1.7e-10 40.6 0.0 8.8e-05 22.8 0.0 3.7 1 1 3 4 4 4 2 Tetratricopeptide repeat TPR_9 PF13371.1 gi|154151489|ref|YP_001405107.1| - 2.3e-10 40.1 0.3 2.3e-08 33.7 0.1 2.6 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_6 PF13174.1 gi|154151489|ref|YP_001405107.1| - 1.8e-08 34.3 0.0 0.23 11.9 0.0 4.7 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_7 PF13176.1 gi|154151489|ref|YP_001405107.1| - 5.1e-08 32.1 0.0 0.046 13.5 0.0 3.8 3 0 0 3 3 3 2 Tetratricopeptide repeat PAS PF00989.19 gi|154151489|ref|YP_001405107.1| - 7.8e-08 32.0 0.0 0.00013 21.7 0.0 2.5 2 0 0 2 2 2 2 PAS fold PAS_4 PF08448.5 gi|154151489|ref|YP_001405107.1| - 5.3e-06 26.4 0.0 7.7e-05 22.6 0.0 2.3 1 1 0 1 1 1 1 PAS fold Apc3 PF12895.2 gi|154151489|ref|YP_001405107.1| - 0.0017 18.4 0.0 0.0083 16.2 0.0 2.2 1 1 1 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 PAS_7 PF12860.2 gi|154151489|ref|YP_001405107.1| - 0.016 15.1 0.0 0.063 13.2 0.0 2.1 1 1 0 1 1 1 0 PAS fold PAS_8 PF13188.1 gi|154151489|ref|YP_001405107.1| - 0.04 13.8 0.0 0.14 12.0 0.0 1.9 1 0 0 1 1 1 0 PAS domain PAS_3 PF08447.6 gi|154151489|ref|YP_001405107.1| - 0.1 12.6 0.0 1.4 9.0 0.0 2.3 1 1 0 1 1 1 0 PAS fold Imm43 PF15602.1 gi|154151489|ref|YP_001405107.1| - 0.12 12.3 0.0 3.7 7.4 0.0 2.4 2 0 0 2 2 2 0 Immunity protein 43 NARP1 PF12569.3 gi|154151489|ref|YP_001405107.1| - 0.18 10.5 0.0 0.34 9.6 0.0 1.4 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 PAC2 PF09754.4 gi|154151490|ref|YP_001405108.1| - 5.7e-51 173.4 0.0 6.5e-51 173.2 0.0 1.0 1 0 0 1 1 1 1 PAC2 family NAD_binding_10 PF13460.1 gi|154151490|ref|YP_001405108.1| - 0.03 14.3 0.0 0.08 12.9 0.0 1.7 2 0 0 2 2 2 0 NADH(P)-binding Nop10p PF04135.7 gi|298206422|ref|YP_003717809.1| - 4.5e-19 67.9 0.0 4.7e-19 67.8 0.0 1.0 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family Prim_Zn_Ribbon PF08273.7 gi|298206422|ref|YP_003717809.1| - 0.032 14.3 2.1 0.11 12.6 1.4 1.9 1 1 0 1 1 1 0 Zinc-binding domain of primase-helicase zf-NADH-PPase PF09297.6 gi|298206422|ref|YP_003717809.1| - 0.71 9.4 3.3 0.71 9.4 0.3 2.1 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain EIF_2_alpha PF07541.7 gi|154151491|ref|YP_001405109.1| - 7.8e-25 86.8 0.2 1.3e-24 86.0 0.1 1.4 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 2 alpha subunit S1 PF00575.18 gi|154151491|ref|YP_001405109.1| - 5.5e-12 45.6 0.2 1.5e-11 44.1 0.0 1.8 2 0 0 2 2 2 1 S1 RNA binding domain Ribosomal_S27e PF01667.12 gi|154151492|ref|YP_001405110.1| - 6.3e-26 89.6 1.2 6.8e-26 89.5 0.9 1.0 1 0 0 1 1 1 1 Ribosomal protein S27 Zn-ribbon_8 PF09723.5 gi|154151492|ref|YP_001405110.1| - 0.0016 18.3 1.7 0.0024 17.7 1.1 1.2 1 0 0 1 1 1 1 Zinc ribbon domain DUF2387 PF09526.5 gi|154151492|ref|YP_001405110.1| - 0.019 14.8 0.7 0.026 14.4 0.5 1.2 1 0 0 1 1 1 0 Probable metal-binding protein (DUF2387) TF_Zn_Ribbon PF08271.7 gi|154151492|ref|YP_001405110.1| - 0.02 14.2 2.0 0.031 13.5 1.4 1.3 1 0 0 1 1 1 0 TFIIB zinc-binding Sgf11 PF08209.6 gi|154151492|ref|YP_001405110.1| - 0.025 13.8 2.3 0.31 10.3 0.1 2.2 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) IBR PF01485.16 gi|154151492|ref|YP_001405110.1| - 0.032 14.1 0.5 0.036 13.9 0.4 1.1 1 0 0 1 1 1 0 IBR domain Mu-like_Com PF10122.4 gi|154151492|ref|YP_001405110.1| - 0.035 13.1 2.1 0.12 11.3 0.1 2.1 1 1 1 2 2 2 0 Mu-like prophage protein Com Zn_Tnp_IS1595 PF12760.2 gi|154151492|ref|YP_001405110.1| - 0.046 13.5 0.5 0.06 13.1 0.3 1.2 1 0 0 1 1 1 0 Transposase zinc-ribbon domain HypA PF01155.14 gi|154151492|ref|YP_001405110.1| - 0.07 12.8 0.3 0.079 12.6 0.2 1.1 1 0 0 1 1 1 0 Hydrogenase expression/synthesis hypA family zf-CHY PF05495.7 gi|154151492|ref|YP_001405110.1| - 0.072 13.2 0.6 0.092 12.9 0.4 1.2 1 0 0 1 1 1 0 CHY zinc finger Lar_restr_allev PF14354.1 gi|154151492|ref|YP_001405110.1| - 0.077 13.3 0.9 1 9.7 0.8 1.9 1 1 1 2 2 2 0 Restriction alleviation protein Lar TFIIS_C PF01096.13 gi|154151492|ref|YP_001405110.1| - 0.077 12.6 4.1 3.1 7.4 2.8 2.1 1 1 0 1 1 1 0 Transcription factor S-II (TFIIS) Zn_Tnp_IS91 PF14319.1 gi|154151492|ref|YP_001405110.1| - 0.083 12.3 0.3 0.09 12.2 0.2 1.1 1 0 0 1 1 1 0 Transposase zinc-binding domain Elf1 PF05129.8 gi|154151492|ref|YP_001405110.1| - 0.096 12.3 2.0 0.13 11.9 1.4 1.4 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like zinc_ribbon_6 PF14599.1 gi|154151492|ref|YP_001405110.1| - 0.098 12.4 0.7 0.14 11.9 0.5 1.3 1 0 0 1 1 1 0 Zinc-ribbon zf-DNA_Pol PF08996.5 gi|154151492|ref|YP_001405110.1| - 0.12 11.7 1.1 0.15 11.4 0.8 1.4 1 1 0 1 1 1 0 DNA Polymerase alpha zinc finger OrfB_Zn_ribbon PF07282.6 gi|154151492|ref|YP_001405110.1| - 0.12 11.9 0.5 0.15 11.7 0.3 1.3 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zf-AN1 PF01428.11 gi|154151492|ref|YP_001405110.1| - 0.14 12.0 1.0 3.2 7.7 0.1 2.1 2 0 0 2 2 2 0 AN1-like Zinc finger zf-C2H2 PF00096.21 gi|154151492|ref|YP_001405110.1| - 0.2 12.0 1.3 7 7.2 0.1 2.4 2 0 0 2 2 2 0 Zinc finger, C2H2 type Zn_Tnp_IS1 PF03811.8 gi|154151492|ref|YP_001405110.1| - 0.22 11.0 0.6 0.22 11.0 0.4 2.1 1 1 1 2 2 2 0 InsA N-terminal domain zf-HIT PF04438.11 gi|154151492|ref|YP_001405110.1| - 0.22 11.2 1.1 10 5.8 0.1 2.1 2 0 0 2 2 2 0 HIT zinc finger zinc_ribbon_5 PF13719.1 gi|154151492|ref|YP_001405110.1| - 0.35 10.4 5.0 0.92 9.1 0.1 2.3 1 1 1 2 2 2 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|154151492|ref|YP_001405110.1| - 0.6 9.8 5.2 2 8.1 0.2 2.3 1 1 1 2 2 2 0 zinc-ribbon domain DUF3797 PF12677.2 gi|154151492|ref|YP_001405110.1| - 0.97 9.0 4.5 2.8 7.6 0.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) zf-ribbon_3 PF13248.1 gi|154151492|ref|YP_001405110.1| - 1.3 8.3 3.9 13 5.1 2.6 2.1 1 1 1 2 2 2 0 zinc-ribbon domain DUF329 PF03884.9 gi|154151492|ref|YP_001405110.1| - 1.5 8.4 4.0 3 7.4 0.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF329) Ribosomal_L44 PF00935.14 gi|154151493|ref|YP_001405111.1| - 1.1e-27 95.8 6.0 1.4e-27 95.5 4.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L44 Fer4_8 PF13183.1 gi|154151493|ref|YP_001405111.1| - 0.022 14.7 0.2 0.035 14.1 0.1 1.2 1 0 0 1 1 1 0 4Fe-4S dicluster domain Ribosomal_L33 PF00471.15 gi|154151493|ref|YP_001405111.1| - 0.04 14.1 1.3 0.04 14.1 0.9 2.3 2 0 0 2 2 2 0 Ribosomal protein L33 DUF2296 PF10058.4 gi|154151493|ref|YP_001405111.1| - 0.048 13.4 1.8 4.3 7.1 0.0 2.2 2 0 0 2 2 2 0 Predicted integral membrane metal-binding protein (DUF2296) Elf1 PF05129.8 gi|154151493|ref|YP_001405111.1| - 0.051 13.2 4.2 1.6 8.4 0.4 2.2 1 1 0 2 2 2 0 Transcription elongation factor Elf1 like Zn_Tnp_IS1 PF03811.8 gi|154151493|ref|YP_001405111.1| - 0.076 12.5 2.0 6.6 6.3 0.1 2.3 2 0 0 2 2 2 0 InsA N-terminal domain Zn-ribbon_8 PF09723.5 gi|154151493|ref|YP_001405111.1| - 0.077 12.9 1.7 3.5 7.6 0.2 2.4 2 0 0 2 2 2 0 Zinc ribbon domain Lar_restr_allev PF14354.1 gi|154151493|ref|YP_001405111.1| - 0.081 13.2 0.5 0.17 12.1 0.4 1.5 1 1 0 1 1 1 0 Restriction alleviation protein Lar Rpr2 PF04032.11 gi|154151493|ref|YP_001405111.1| - 0.089 12.6 0.8 0.11 12.3 0.5 1.1 1 0 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain zf-ribbon_3 PF13248.1 gi|154151493|ref|YP_001405111.1| - 0.12 11.6 1.2 7.4 5.9 0.0 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-ISL3 PF14690.1 gi|154151493|ref|YP_001405111.1| - 0.12 12.3 2.8 1.3 9.0 0.1 2.3 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Zn_Tnp_IS1595 PF12760.2 gi|154151493|ref|YP_001405111.1| - 0.14 12.0 1.1 11 5.9 0.1 2.2 2 0 0 2 2 2 0 Transposase zinc-ribbon domain NOB1_Zn_bind PF08772.6 gi|154151493|ref|YP_001405111.1| - 0.26 11.1 4.2 3.9 7.3 0.3 2.1 2 0 0 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like Tnp_zf-ribbon_2 PF13842.1 gi|154151493|ref|YP_001405111.1| - 0.32 11.4 3.4 0.71 10.3 0.1 2.3 2 0 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon zf-B_box PF00643.19 gi|154151493|ref|YP_001405111.1| - 0.47 10.3 3.0 15 5.5 0.1 2.2 2 0 0 2 2 2 0 B-box zinc finger DNA_primase_S PF01896.14 gi|154151495|ref|YP_001405113.1| - 5.4e-17 61.9 0.0 9.4e-17 61.1 0.0 1.4 1 0 0 1 1 1 1 Eukaryotic and archaeal DNA primase small subunit MutS_IV PF05190.13 gi|154151495|ref|YP_001405113.1| - 0.15 12.2 0.0 0.27 11.4 0.0 1.4 1 0 0 1 1 1 0 MutS family domain IV Radical_SAM PF04055.16 gi|154151496|ref|YP_001405114.1| - 3.3e-17 63.1 0.0 1.8e-16 60.7 0.0 2.2 3 0 0 3 3 3 1 Radical SAM superfamily Acetyltransf_1 PF00583.19 gi|154151496|ref|YP_001405114.1| - 1.3e-08 34.7 0.2 4.1e-08 33.1 0.1 2.0 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.1 gi|154151496|ref|YP_001405114.1| - 0.0037 17.3 0.1 0.023 14.8 0.1 2.3 2 1 0 2 2 2 1 Acetyltransferase (GNAT) domain UPF0058 PF01893.11 gi|154151497|ref|YP_001405115.1| - 1.3e-13 50.8 0.4 1.4e-13 50.7 0.3 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0058 ADP_ribosyl_GH PF03747.9 gi|154151498|ref|YP_001405116.1| - 5.4e-45 154.3 4.8 8.5e-45 153.7 3.3 1.3 1 1 0 1 1 1 1 ADP-ribosylglycohydrolase C_GCAxxG_C_C PF09719.5 gi|154151498|ref|YP_001405116.1| - 0.0022 17.8 2.0 0.0023 17.6 0.2 1.8 2 0 0 2 2 2 1 Putative redox-active protein (C_GCAxxG_C_C) UPF0179 PF03684.8 gi|154151499|ref|YP_001405117.1| - 4.4e-53 178.7 4.4 4.9e-53 178.5 3.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0179) Asp_decarbox PF02261.11 gi|154151499|ref|YP_001405117.1| - 0.062 12.8 0.1 0.1 12.1 0.0 1.4 1 0 0 1 1 1 0 Aspartate decarboxylase Fe-ADH_2 PF13685.1 gi|154151500|ref|YP_001405118.1| - 1.3e-65 221.1 2.4 1.6e-65 220.8 1.7 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.14 gi|154151500|ref|YP_001405118.1| - 1.7e-24 86.1 2.3 2.2e-24 85.8 1.6 1.2 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.15 gi|154151500|ref|YP_001405118.1| - 8.4e-10 37.9 0.3 5.4e-09 35.3 0.2 1.9 1 1 0 1 1 1 1 3-dehydroquinate synthase DUF63 PF01889.12 gi|154151501|ref|YP_001405119.1| - 1.3e-80 271.3 26.5 1.5e-80 271.1 18.4 1.0 1 0 0 1 1 1 1 Membrane protein of unknown function DUF63 DUF1230 PF06799.6 gi|154151501|ref|YP_001405119.1| - 0.62 9.9 8.5 0.087 12.6 2.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1230) DUF95 PF01944.12 gi|154151502|ref|YP_001405120.1| - 7.4e-36 123.3 22.1 8.5e-36 123.1 15.3 1.0 1 0 0 1 1 1 1 Integral membrane protein DUF95 tRNA-synt_2b PF00587.20 gi|154151503|ref|YP_001405121.1| - 3.2e-19 69.1 0.2 5.4e-19 68.4 0.1 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.15 gi|154151503|ref|YP_001405121.1| - 8.2e-13 48.1 0.0 1.7e-12 47.1 0.0 1.5 1 0 0 1 1 1 1 Anticodon binding domain ProRS-C_1 PF09180.6 gi|154151503|ref|YP_001405121.1| - 9.2e-11 41.5 0.2 4.7e-10 39.2 0.0 2.3 2 0 0 2 2 2 1 Prolyl-tRNA synthetase, C-terminal TIR_2 PF13676.1 gi|154151503|ref|YP_001405121.1| - 0.1 12.7 0.1 0.61 10.2 0.0 2.3 3 0 0 3 3 3 0 TIR domain FlgD_ig PF13860.1 gi|154151504|ref|YP_001405122.1| - 2.2e-05 24.0 1.6 0.017 14.8 0.2 2.9 3 0 0 3 3 3 2 FlgD Ig-like domain CarboxypepD_reg PF13620.1 gi|154151504|ref|YP_001405122.1| - 0.0032 17.4 5.2 0.86 9.6 0.2 2.9 2 1 0 2 2 2 2 Carboxypeptidase regulatory-like domain CARDB PF07705.6 gi|154151504|ref|YP_001405122.1| - 0.031 14.3 7.3 0.12 12.4 0.6 3.1 2 1 1 3 3 3 0 CARDB Cna_B PF05738.8 gi|154151504|ref|YP_001405122.1| - 0.083 12.6 2.4 1.5 8.6 0.2 2.5 2 0 0 2 2 2 0 Cna protein B-type domain Wzt_C PF14524.1 gi|154151504|ref|YP_001405122.1| - 0.1 12.3 0.0 1.6 8.3 0.0 2.2 2 0 0 2 2 2 0 Wzt C-terminal domain PKD PF00801.15 gi|154151504|ref|YP_001405122.1| - 0.11 12.3 2.8 1.7 8.4 0.3 2.6 2 0 0 2 2 2 0 PKD domain Big_3_4 PF13754.1 gi|154151504|ref|YP_001405122.1| - 0.33 11.3 11.7 1.2 9.4 0.6 3.5 3 0 0 3 3 3 0 Bacterial Ig-like domain (group 3) Y_Y_Y PF07495.8 gi|154151504|ref|YP_001405122.1| - 3.2 7.5 7.7 23 4.8 0.1 3.9 4 1 0 4 4 4 0 Y_Y_Y domain UPF0547 PF10571.4 gi|154151505|ref|YP_001405123.1| - 0.045 13.4 3.5 0.045 13.4 2.4 2.5 3 0 0 3 3 3 0 Uncharacterised protein family UPF0547 Rad50_zn_hook PF04423.9 gi|154151505|ref|YP_001405123.1| - 0.057 12.8 4.7 0.2 11.1 0.5 2.5 2 0 0 2 2 2 0 Rad50 zinc hook motif C1_1 PF00130.17 gi|154151505|ref|YP_001405123.1| - 0.076 12.7 7.5 1.8 8.3 0.4 2.5 2 1 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-C3HC4_3 PF13920.1 gi|154151505|ref|YP_001405123.1| - 0.23 11.1 4.2 0.73 9.5 1.2 2.5 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-TFIIB PF13453.1 gi|154151505|ref|YP_001405123.1| - 3.5 6.9 6.5 27 4.0 0.0 3.5 3 1 0 3 3 3 0 Transcription factor zinc-finger ParA PF10609.4 gi|154151507|ref|YP_001405125.1| - 1.2e-34 117.9 0.0 2.2e-34 117.1 0.0 1.4 1 0 0 1 1 1 1 ParA/MinD ATPase like CbiA PF01656.18 gi|154151507|ref|YP_001405125.1| - 3.7e-21 75.4 0.1 6.3e-21 74.6 0.1 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.1 gi|154151507|ref|YP_001405125.1| - 7.1e-12 45.5 0.0 3e-11 43.5 0.0 1.8 1 1 0 1 1 1 1 AAA domain MipZ PF09140.6 gi|154151507|ref|YP_001405125.1| - 8.4e-09 34.8 0.0 1.6e-08 33.9 0.0 1.5 1 1 0 1 1 1 1 ATPase MipZ ArsA_ATPase PF02374.10 gi|154151507|ref|YP_001405125.1| - 3.3e-08 32.9 0.8 2.7e-07 29.9 0.1 2.4 2 1 0 2 2 2 1 Anion-transporting ATPase Fer4_NifH PF00142.13 gi|154151507|ref|YP_001405125.1| - 0.00011 21.5 0.7 0.00031 20.0 0.0 1.9 2 1 1 3 3 3 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_26 PF13500.1 gi|154151507|ref|YP_001405125.1| - 0.0015 18.1 1.0 0.25 10.9 0.2 2.5 2 1 0 2 2 2 1 AAA domain APS_kinase PF01583.15 gi|154151507|ref|YP_001405125.1| - 0.0017 18.0 0.0 0.0024 17.5 0.0 1.2 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_25 PF13481.1 gi|154151507|ref|YP_001405125.1| - 0.0038 16.6 0.0 0.0073 15.7 0.0 1.4 1 0 0 1 1 1 1 AAA domain ArgK PF03308.11 gi|154151507|ref|YP_001405125.1| - 0.0076 15.0 0.1 0.013 14.2 0.1 1.3 1 0 0 1 1 1 1 ArgK protein VirC1 PF07015.6 gi|154151507|ref|YP_001405125.1| - 0.0078 15.3 0.0 0.012 14.6 0.0 1.2 1 0 0 1 1 1 1 VirC1 protein AAA_29 PF13555.1 gi|154151507|ref|YP_001405125.1| - 0.015 14.7 0.1 0.25 10.8 0.1 2.2 2 0 0 2 2 2 0 P-loop containing region of AAA domain YhjQ PF06564.7 gi|154151507|ref|YP_001405125.1| - 0.023 14.0 0.1 0.047 13.0 0.0 1.5 2 0 0 2 2 2 0 YhjQ protein SRP54 PF00448.17 gi|154151507|ref|YP_001405125.1| - 0.024 14.1 0.1 0.043 13.2 0.0 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain MobB PF03205.9 gi|154151507|ref|YP_001405125.1| - 0.025 14.2 0.1 0.047 13.3 0.0 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B zinc_ribbon_2 PF13240.1 gi|154151507|ref|YP_001405125.1| - 0.05 13.1 0.2 0.05 13.1 0.2 2.1 2 0 0 2 2 2 0 zinc-ribbon domain AAA_19 PF13245.1 gi|154151507|ref|YP_001405125.1| - 0.069 12.9 1.0 0.64 9.8 0.1 2.2 2 0 0 2 2 2 0 Part of AAA domain AAA_17 PF13207.1 gi|154151507|ref|YP_001405125.1| - 0.095 13.5 0.1 0.26 12.0 0.1 1.7 2 0 0 2 2 1 0 AAA domain PhnA_Zn_Ribbon PF08274.7 gi|154151507|ref|YP_001405125.1| - 0.11 12.3 0.3 0.11 12.3 0.2 2.2 2 1 0 2 2 2 0 PhnA Zinc-Ribbon HD PF01966.17 gi|154151508|ref|YP_001405126.1| - 4.5e-12 46.0 0.0 8.9e-12 45.0 0.0 1.5 1 0 0 1 1 1 1 HD domain HD_assoc PF13286.1 gi|154151508|ref|YP_001405126.1| - 2.8e-09 37.0 0.1 1.4e-08 34.9 0.1 2.1 1 1 0 1 1 1 1 Phosphohydrolase-associated domain Pkinase PF00069.20 gi|154151509|ref|YP_001405127.1| - 1.8e-43 148.5 0.0 2.8e-43 147.9 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain NosD PF05048.8 gi|154151509|ref|YP_001405127.1| - 8e-40 136.4 15.4 1.1e-39 135.9 10.6 1.2 1 0 0 1 1 1 1 Periplasmic copper-binding protein (NosD) Pkinase_Tyr PF07714.12 gi|154151509|ref|YP_001405127.1| - 2.2e-29 102.3 0.0 3e-29 101.8 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Beta_helix PF13229.1 gi|154151509|ref|YP_001405127.1| - 2.3e-11 43.6 27.2 4.7e-11 42.6 18.6 1.7 1 1 0 1 1 1 1 Right handed beta helix region Kinase-like PF14531.1 gi|154151509|ref|YP_001405127.1| - 0.00061 18.8 0.0 0.00097 18.1 0.0 1.2 1 0 0 1 1 1 1 Kinase-like APH PF01636.18 gi|154151509|ref|YP_001405127.1| - 0.001 18.8 0.1 0.0022 17.7 0.0 1.5 1 1 0 1 1 1 1 Phosphotransferase enzyme family FHA PF00498.21 gi|154151510|ref|YP_001405128.1| - 4e-10 39.6 0.0 6.8e-10 38.9 0.0 1.4 1 0 0 1 1 1 1 FHA domain HTH_20 PF12840.2 gi|154151510|ref|YP_001405128.1| - 2.6e-05 23.9 0.0 0.00011 21.9 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.15 gi|154151510|ref|YP_001405128.1| - 6.3e-05 22.5 0.3 0.00019 21.0 0.1 2.0 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family TrmB PF01978.14 gi|154151510|ref|YP_001405128.1| - 0.0009 18.9 0.1 0.0023 17.6 0.0 1.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB DUF2250 PF10007.4 gi|154151510|ref|YP_001405128.1| - 0.0047 16.8 0.1 0.0088 15.9 0.1 1.4 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_45 PF14947.1 gi|154151510|ref|YP_001405128.1| - 0.0094 15.7 0.0 0.04 13.7 0.0 1.9 1 1 1 2 2 2 1 Winged helix-turn-helix HTH_24 PF13412.1 gi|154151510|ref|YP_001405128.1| - 0.042 13.2 0.1 0.089 12.1 0.1 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Capsid_NCLDV PF04451.7 gi|154151512|ref|YP_001405130.1| - 0.19 10.6 5.8 0.52 9.2 0.2 2.2 2 0 0 2 2 2 0 Large eukaryotic DNA virus major capsid protein ACT PF01842.20 gi|154151513|ref|YP_001405131.1| - 2.7e-07 29.9 0.3 9.1e-07 28.2 0.1 2.1 2 1 0 2 2 2 1 ACT domain ACT_4 PF13291.1 gi|154151513|ref|YP_001405131.1| - 5.9e-06 26.5 0.1 0.0002 21.6 0.0 2.3 2 0 0 2 2 2 1 ACT domain Transketolase_C PF02780.15 gi|154151513|ref|YP_001405131.1| - 0.01 15.7 0.6 0.024 14.5 0.4 1.6 1 1 0 1 1 1 0 Transketolase, C-terminal domain ACT_6 PF13740.1 gi|154151513|ref|YP_001405131.1| - 0.024 14.3 0.1 0.068 12.8 0.0 1.8 1 0 0 1 1 1 0 ACT domain Peripla_BP_4 PF13407.1 gi|154151513|ref|YP_001405131.1| - 0.12 11.6 0.1 0.2 10.9 0.1 1.3 1 0 0 1 1 1 0 Periplasmic binding protein domain Sua5_yciO_yrdC PF01300.13 gi|154151514|ref|YP_001405132.1| - 4.5e-44 149.8 0.0 5.2e-44 149.6 0.0 1.0 1 0 0 1 1 1 1 Telomere recombination NTP_transf_2 PF01909.18 gi|154151515|ref|YP_001405133.1| - 7.8e-05 22.9 0.0 0.00016 21.9 0.0 1.5 1 0 0 1 1 1 1 Nucleotidyltransferase domain TfuA PF07812.7 gi|154151516|ref|YP_001405134.1| - 1.7e-46 156.5 0.3 4.3e-46 155.2 0.1 1.7 2 0 0 2 2 2 1 TfuA-like protein YcaO PF02624.11 gi|154151517|ref|YP_001405135.1| - 1.3e-95 320.7 0.1 2e-95 320.1 0.0 1.3 2 0 0 2 2 2 1 YcaO-like family PAS_9 PF13426.1 gi|154151518|ref|YP_001405136.1| - 6e-07 29.7 0.0 2.2e-06 27.9 0.0 1.9 1 1 0 1 1 1 1 PAS domain PAS_4 PF08448.5 gi|154151518|ref|YP_001405136.1| - 0.00046 20.2 0.0 0.013 15.5 0.0 2.2 1 1 0 1 1 1 1 PAS fold PAS PF00989.19 gi|154151518|ref|YP_001405136.1| - 0.0013 18.5 0.0 0.02 14.6 0.0 2.3 1 1 1 2 2 2 1 PAS fold HATPase_c PF02518.21 gi|154151518|ref|YP_001405136.1| - 0.0041 16.8 0.0 0.0071 16.0 0.0 1.3 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IBP39 PF11422.3 gi|154151518|ref|YP_001405136.1| - 0.027 13.9 0.1 0.042 13.3 0.0 1.3 1 0 0 1 1 1 0 Initiator binding protein 39 kDa PAS_3 PF08447.6 gi|154151518|ref|YP_001405136.1| - 0.11 12.5 0.0 1.4 9.1 0.0 2.3 2 0 0 2 2 2 0 PAS fold Bacteriocin_II PF01721.13 gi|154151518|ref|YP_001405136.1| - 0.43 10.1 0.0 0.43 10.1 0.0 2.1 3 0 0 3 3 3 0 Class II bacteriocin DUF1724 PF08350.5 gi|154151519|ref|YP_001405137.1| - 4e-23 80.7 0.5 1.8e-22 78.6 0.1 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF1724) HxlR PF01638.12 gi|154151519|ref|YP_001405137.1| - 0.018 14.6 0.2 0.044 13.4 0.1 1.6 1 1 0 1 1 1 0 HxlR-like helix-turn-helix HTH_27 PF13463.1 gi|154151519|ref|YP_001405137.1| - 0.043 14.1 0.0 0.08 13.2 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain UbiA PF01040.13 gi|154151520|ref|YP_001405138.1| - 2.2e-21 76.2 18.2 3.2e-21 75.7 12.6 1.2 1 0 0 1 1 1 1 UbiA prenyltransferase family DUF59 PF01883.14 gi|154151521|ref|YP_001405139.1| - 6.8e-15 54.8 0.4 1.2e-14 54.0 0.3 1.4 1 0 0 1 1 1 1 Domain of unknown function DUF59 Hexapep PF00132.19 gi|154151521|ref|YP_001405139.1| - 1.2e-10 40.3 15.8 5.6e-07 28.7 2.3 3.4 2 1 1 3 3 3 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.1 gi|154151521|ref|YP_001405139.1| - 1.7e-05 24.2 17.3 0.00041 19.8 2.9 2.9 2 1 1 3 3 3 2 Hexapeptide repeat of succinyl-transferase SATase_N PF06426.9 gi|154151521|ref|YP_001405139.1| - 0.00049 20.3 0.0 0.00092 19.4 0.0 1.5 1 0 0 1 1 1 1 Serine acetyltransferase, N-terminal NifU PF01106.12 gi|154151521|ref|YP_001405139.1| - 0.0023 17.6 0.1 0.005 16.5 0.1 1.6 1 0 0 1 1 1 1 NifU-like domain PALP PF00291.20 gi|154151522|ref|YP_001405140.1| - 3.2e-61 207.2 0.5 3.7e-61 207.0 0.4 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme ADH_zinc_N PF00107.21 gi|154151522|ref|YP_001405140.1| - 3.4e-05 23.4 0.2 0.00069 19.1 0.0 2.7 2 1 0 2 2 2 1 Zinc-binding dehydrogenase DUF2188 PF09954.4 gi|154151522|ref|YP_001405140.1| - 0.14 12.0 0.3 1.8 8.5 0.1 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2188) CaKB PF03185.10 gi|154151522|ref|YP_001405140.1| - 0.16 11.2 0.0 0.26 10.6 0.0 1.3 1 0 0 1 1 1 0 Calcium-activated potassium channel, beta subunit Aminotran_5 PF00266.14 gi|154151523|ref|YP_001405141.1| - 5.5e-125 416.9 0.0 6.2e-125 416.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.16 gi|154151523|ref|YP_001405141.1| - 8.9e-12 44.7 0.0 1.2e-11 44.3 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_1_2 PF00155.16 gi|154151523|ref|YP_001405141.1| - 5.2e-08 32.2 0.0 9.2e-08 31.4 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.12 gi|154151523|ref|YP_001405141.1| - 6.3e-07 28.7 0.0 7.5e-07 28.5 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.15 gi|154151523|ref|YP_001405141.1| - 0.0023 16.3 0.0 0.003 15.8 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme SLA_LP_auto_ag PF05889.8 gi|154151523|ref|YP_001405141.1| - 0.13 10.6 0.0 0.22 9.9 0.0 1.4 1 0 0 1 1 1 0 Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen) ThiF PF00899.16 gi|154151524|ref|YP_001405142.1| - 1.7e-43 147.6 0.5 3.1e-43 146.8 0.3 1.4 1 0 0 1 1 1 1 ThiF family MoeZ_MoeB PF05237.8 gi|154151524|ref|YP_001405142.1| - 2.8e-19 68.4 0.8 6.6e-19 67.2 0.5 1.6 1 0 0 1 1 1 1 MoeZ/MoeB domain Shikimate_DH PF01488.15 gi|154151524|ref|YP_001405142.1| - 1.8e-05 24.8 0.2 0.00011 22.2 0.2 2.1 1 1 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase ApbA PF02558.11 gi|154151524|ref|YP_001405142.1| - 0.00045 19.6 0.0 0.00087 18.7 0.0 1.5 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA NAD_binding_2 PF03446.10 gi|154151524|ref|YP_001405142.1| - 0.00096 19.0 0.1 0.0015 18.3 0.1 1.3 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase 3HCDH_N PF02737.13 gi|154151524|ref|YP_001405142.1| - 0.0013 18.4 0.1 0.0026 17.4 0.1 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_7 PF13241.1 gi|154151524|ref|YP_001405142.1| - 0.0019 18.4 0.2 0.0036 17.5 0.2 1.5 1 0 0 1 1 1 1 Putative NAD(P)-binding TrkA_N PF02254.13 gi|154151524|ref|YP_001405142.1| - 0.0022 17.9 0.1 0.0047 16.9 0.1 1.6 1 0 0 1 1 1 1 TrkA-N domain DAO PF01266.19 gi|154151524|ref|YP_001405142.1| - 0.0025 16.7 0.0 0.0038 16.1 0.0 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase adh_short PF00106.20 gi|154151524|ref|YP_001405142.1| - 0.0032 17.3 0.1 0.0062 16.4 0.1 1.4 1 0 0 1 1 1 1 short chain dehydrogenase F420_oxidored PF03807.12 gi|154151524|ref|YP_001405142.1| - 0.011 16.0 0.0 0.028 14.8 0.0 1.7 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.14 gi|154151524|ref|YP_001405142.1| - 0.014 14.5 0.2 0.052 12.7 0.0 1.9 1 1 1 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Arteri_env PF01606.11 gi|154151525|ref|YP_001405143.1| - 0.068 12.8 0.1 0.7 9.5 0.0 1.9 1 1 1 2 2 2 0 Arterivirus envelope protein ThiI PF02568.9 gi|154151526|ref|YP_001405144.1| - 2e-62 210.1 0.0 2.3e-62 209.9 0.0 1.0 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) QueC PF06508.8 gi|154151526|ref|YP_001405144.1| - 6.3e-07 28.8 0.0 0.00038 19.8 0.0 2.3 2 1 0 2 2 2 2 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.11 gi|154151526|ref|YP_001405144.1| - 2.1e-06 26.5 0.0 3.1e-06 25.9 0.0 1.3 1 0 0 1 1 1 1 tRNA methyl transferase NAD_synthase PF02540.12 gi|154151526|ref|YP_001405144.1| - 3e-05 23.0 0.0 7.2e-05 21.7 0.0 1.7 2 0 0 2 2 2 1 NAD synthase ATP_bind_3 PF01171.15 gi|154151526|ref|YP_001405144.1| - 0.00069 19.1 0.1 0.021 14.3 0.1 2.1 1 1 0 1 1 1 1 PP-loop family Asn_synthase PF00733.16 gi|154151526|ref|YP_001405144.1| - 0.012 15.0 0.0 0.015 14.8 0.0 1.3 1 0 0 1 1 1 0 Asparagine synthase PALP PF00291.20 gi|154151529|ref|YP_001405147.1| - 1.6e-62 211.4 0.0 1.8e-62 211.3 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme CbiG_N PF11760.3 gi|154151529|ref|YP_001405147.1| - 0.002 17.7 0.0 2.1 8.1 0.0 2.4 2 0 0 2 2 2 2 Cobalamin synthesis G N-terminal Cys_Met_Meta_PP PF01053.15 gi|154151530|ref|YP_001405148.1| - 2.3e-149 496.9 0.0 2.6e-149 496.7 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.16 gi|154151530|ref|YP_001405148.1| - 4.5e-06 26.0 0.0 9.9e-06 24.8 0.0 1.5 1 1 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.14 gi|154151530|ref|YP_001405148.1| - 1.7e-05 23.7 0.0 0.00045 19.0 0.0 2.2 2 1 0 2 2 2 1 Aminotransferase class-V Aminotran_1_2 PF00155.16 gi|154151530|ref|YP_001405148.1| - 2.8e-05 23.2 0.0 4.1e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.12 gi|154151530|ref|YP_001405148.1| - 0.00036 19.6 0.1 0.00088 18.4 0.0 1.6 1 1 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family tRNA-synt_1e PF01406.14 gi|154151531|ref|YP_001405149.1| - 6.6e-109 363.6 0.0 8.1e-109 363.3 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.6 gi|154151531|ref|YP_001405149.1| - 2.1e-22 79.3 0.3 2e-11 43.1 0.1 2.1 2 0 0 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1 PF00133.17 gi|154151531|ref|YP_001405149.1| - 1.1e-09 36.8 0.0 6.7e-07 27.6 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1f PF01921.13 gi|154151531|ref|YP_001405149.1| - 7e-06 24.9 0.0 4.2e-05 22.3 0.0 1.9 2 0 0 2 2 2 1 tRNA synthetases class I (K) DALR_2 PF09190.6 gi|154151531|ref|YP_001405149.1| - 0.00016 21.8 2.9 0.0023 18.1 1.0 2.9 2 1 0 2 2 2 1 DALR domain tRNA-synt_1c PF00749.16 gi|154151531|ref|YP_001405149.1| - 0.033 12.8 0.3 0.43 9.1 0.1 2.7 2 1 0 2 2 2 0 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1b PF00579.20 gi|154151531|ref|YP_001405149.1| - 0.16 11.0 0.0 0.32 10.0 0.0 1.5 2 0 0 2 2 2 0 tRNA synthetases class I (W and Y) AsnC_trans_reg PF01037.16 gi|154151532|ref|YP_001405150.1| - 3.4e-06 26.6 0.0 5e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 AsnC family GYD PF08734.6 gi|154151532|ref|YP_001405150.1| - 0.029 14.0 0.0 0.047 13.4 0.0 1.3 1 0 0 1 1 1 0 GYD domain Lumazine_bd PF12870.2 gi|154151532|ref|YP_001405150.1| - 0.065 13.2 0.1 0.14 12.1 0.0 1.6 2 0 0 2 2 2 0 Lumazine-binding domain HMA PF00403.21 gi|154151532|ref|YP_001405150.1| - 0.25 11.5 2.0 0.59 10.3 1.4 1.7 1 1 0 1 1 1 0 Heavy-metal-associated domain Cys_Met_Meta_PP PF01053.15 gi|154151533|ref|YP_001405151.1| - 1.2e-144 481.4 0.0 1.4e-144 481.1 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.12 gi|154151533|ref|YP_001405151.1| - 8.6e-16 57.9 0.1 1.4e-15 57.2 0.1 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.14 gi|154151533|ref|YP_001405151.1| - 4.8e-06 25.5 0.0 9.1e-06 24.6 0.0 1.5 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.16 gi|154151533|ref|YP_001405151.1| - 3e-05 23.1 0.0 4.5e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.16 gi|154151533|ref|YP_001405151.1| - 0.0016 17.6 0.0 0.0049 16.0 0.0 1.8 1 1 0 1 1 1 1 Beta-eliminating lyase Met_gamma_lyase PF06838.6 gi|154151533|ref|YP_001405151.1| - 0.003 15.9 0.7 0.47 8.6 0.1 2.2 2 0 0 2 2 2 2 Methionine gamma-lyase Cys_Met_Meta_PP PF01053.15 gi|154151534|ref|YP_001405152.1| - 3.9e-119 397.3 0.0 4.4e-119 397.2 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.14 gi|154151534|ref|YP_001405152.1| - 2.1e-12 46.4 0.0 2e-10 39.9 0.0 2.1 2 0 0 2 2 2 2 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.12 gi|154151534|ref|YP_001405152.1| - 6.1e-11 41.9 0.1 2.8e-10 39.7 0.0 1.9 2 0 0 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.16 gi|154151534|ref|YP_001405152.1| - 4.3e-05 22.7 0.1 7.7e-05 21.9 0.0 1.4 1 1 0 1 1 1 1 Beta-eliminating lyase Met_gamma_lyase PF06838.6 gi|154151534|ref|YP_001405152.1| - 0.00029 19.2 0.0 0.00083 17.7 0.0 1.7 1 1 0 1 1 1 1 Methionine gamma-lyase DUF4350 PF14258.1 gi|154151534|ref|YP_001405152.1| - 0.028 14.6 0.0 3.9 7.7 0.0 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4350) Aminotran_1_2 PF00155.16 gi|154151535|ref|YP_001405153.1| - 4.5e-70 236.4 0.0 5e-70 236.2 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.15 gi|154151535|ref|YP_001405153.1| - 8.4e-06 24.3 0.0 1.3e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_5 PF00266.14 gi|154151535|ref|YP_001405153.1| - 2.8e-05 23.0 0.0 0.00012 20.9 0.0 2.0 2 1 0 2 2 2 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.12 gi|154151535|ref|YP_001405153.1| - 0.00011 21.3 0.0 0.00017 20.7 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.16 gi|154151535|ref|YP_001405153.1| - 0.0011 18.1 0.0 0.0036 16.4 0.0 1.7 2 0 0 2 2 2 1 Beta-eliminating lyase Oxidored_nitro PF00148.14 gi|154151536|ref|YP_001405154.1| - 2.5e-73 247.0 0.0 2.8e-73 246.8 0.0 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Cytidylate_kin2 PF13189.1 gi|154151536|ref|YP_001405154.1| - 0.11 12.3 0.0 0.68 9.8 0.0 2.3 1 1 0 1 1 1 0 Cytidylate kinase-like family Oxidored_nitro PF00148.14 gi|154151537|ref|YP_001405155.1| - 1.1e-69 235.0 0.0 1.5e-69 234.5 0.0 1.1 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Peripla_BP_2 PF01497.13 gi|154151537|ref|YP_001405155.1| - 0.041 13.0 0.0 0.13 11.3 0.0 1.8 2 0 0 2 2 2 0 Periplasmic binding protein Glyco_hydro_3 PF00933.16 gi|154151537|ref|YP_001405155.1| - 0.16 10.9 0.0 7.6 5.4 0.0 2.1 2 0 0 2 2 2 0 Glycosyl hydrolase family 3 N terminal domain AA_permease PF00324.16 gi|154151538|ref|YP_001405156.1| - 1.8e-29 102.4 46.2 2.7e-29 101.8 32.0 1.3 1 1 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.1 gi|154151538|ref|YP_001405156.1| - 1.4e-24 86.3 52.4 1.8e-24 86.1 36.3 1.1 1 0 0 1 1 1 1 Amino acid permease IncA PF04156.9 gi|154151538|ref|YP_001405156.1| - 0.86 9.1 0.0 0.86 9.1 0.0 4.5 6 0 0 6 6 6 0 IncA protein UPF0233 PF06781.7 gi|154151538|ref|YP_001405156.1| - 2.6 7.7 10.0 1.1 8.9 0.0 3.9 3 1 2 5 5 5 0 Uncharacterised protein family (UPF0233) Acetyltransf_1 PF00583.19 gi|154151539|ref|YP_001405157.1| - 2.3e-16 59.5 0.0 3.2e-16 59.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|154151539|ref|YP_001405157.1| - 1.6e-12 47.3 0.0 2.3e-12 46.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.1 gi|154151539|ref|YP_001405157.1| - 1.2e-11 44.7 0.0 1.5e-11 44.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.1 gi|154151539|ref|YP_001405157.1| - 3.9e-11 42.8 0.0 4.9e-11 42.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|154151539|ref|YP_001405157.1| - 3.7e-09 36.7 0.0 4.9e-09 36.3 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 gi|154151539|ref|YP_001405157.1| - 6.1e-08 32.6 0.0 7.7e-08 32.3 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.5 gi|154151539|ref|YP_001405157.1| - 0.0022 17.6 0.0 0.0032 17.1 0.0 1.4 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_CG PF14542.1 gi|154151539|ref|YP_001405157.1| - 0.0031 17.3 0.0 0.0073 16.1 0.0 1.8 1 1 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_6 PF13480.1 gi|154151539|ref|YP_001405157.1| - 0.026 14.4 0.0 0.099 12.5 0.0 1.8 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Frankia_peptide PF14407.1 gi|154151539|ref|YP_001405157.1| - 0.14 11.9 0.1 0.78 9.5 0.0 2.1 2 0 0 2 2 2 0 Ribosomally synthesized peptide prototyped by Frankia Franean1_4349. Radical_SAM PF04055.16 gi|154151540|ref|YP_001405158.1| - 5.9e-08 33.0 0.0 3.7e-07 30.4 0.0 2.0 2 0 0 2 2 2 1 Radical SAM superfamily AnfO_nitrog PF09582.5 gi|154151541|ref|YP_001405159.1| - 1.2e-67 226.9 0.0 1.4e-67 226.7 0.0 1.0 1 0 0 1 1 1 1 Iron only nitrogenase protein AnfO (AnfO_nitrog) Oxidored_nitro PF00148.14 gi|154151542|ref|YP_001405160.1| - 9.4e-65 218.7 0.0 1.1e-64 218.6 0.0 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Dot_icm_IcmQ PF09475.5 gi|154151542|ref|YP_001405160.1| - 0.11 11.6 0.0 0.2 10.8 0.0 1.3 1 0 0 1 1 1 0 Dot/Icm secretion system protein (dot_icm_IcmQ) Oxidored_nitro PF00148.14 gi|154151543|ref|YP_001405161.1| - 2.9e-69 233.6 0.0 3.6e-69 233.3 0.0 1.1 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase DUF4418 PF14387.1 gi|154151544|ref|YP_001405162.1| - 2.6e-41 140.2 2.0 4.3e-41 139.5 1.4 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4418) DUF981 PF06168.6 gi|154151544|ref|YP_001405162.1| - 0.035 13.8 3.9 0.051 13.3 0.1 2.3 3 0 0 3 3 3 0 Protein of unknown function (DUF981) DUF898 PF05987.8 gi|154151544|ref|YP_001405162.1| - 0.077 11.8 2.4 0.12 11.1 1.7 1.4 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF898) Acyl_transf_3 PF01757.17 gi|154151544|ref|YP_001405162.1| - 0.081 11.7 3.5 0.15 10.8 2.5 1.5 1 1 0 1 1 1 0 Acyltransferase family Pox_P21 PF05313.7 gi|154151544|ref|YP_001405162.1| - 0.23 10.7 2.2 0.44 9.7 0.7 1.8 2 0 0 2 2 2 0 Poxvirus P21 membrane protein YtpI PF14007.1 gi|154151544|ref|YP_001405162.1| - 0.51 10.2 7.2 4 7.4 0.0 2.7 3 0 0 3 3 3 0 YtpI-like protein O-antigen_lig PF13425.1 gi|154151544|ref|YP_001405162.1| - 2.5 8.0 11.2 2.8 7.9 3.4 2.6 1 1 1 2 2 2 0 O-antigen ligase like membrane protein MacB_PCD PF12704.2 gi|154151545|ref|YP_001405163.1| - 6.1e-18 65.2 0.1 6.1e-18 65.2 0.1 2.1 2 0 0 2 2 2 1 MacB-like periplasmic core domain FtsX PF02687.16 gi|154151545|ref|YP_001405163.1| - 1e-16 60.8 19.4 1.2e-16 60.6 11.2 2.4 3 0 0 3 3 3 1 FtsX-like permease family ABC_tran PF00005.22 gi|154151546|ref|YP_001405164.1| - 6.6e-33 113.9 0.0 8.7e-33 113.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|154151546|ref|YP_001405164.1| - 1.6e-13 51.2 0.3 1.3e-07 31.9 0.0 2.1 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|154151546|ref|YP_001405164.1| - 1.5e-07 30.8 0.1 2.5e-06 26.9 0.1 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.1 gi|154151546|ref|YP_001405164.1| - 1e-05 25.6 0.1 0.053 13.6 0.1 2.2 2 0 0 2 2 2 2 AAA domain AAA_29 PF13555.1 gi|154151546|ref|YP_001405164.1| - 0.00018 20.9 0.2 0.00044 19.7 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_30 PF13604.1 gi|154151546|ref|YP_001405164.1| - 0.00024 20.7 0.1 0.00089 18.8 0.1 1.9 1 1 0 1 1 1 1 AAA domain DUF258 PF03193.11 gi|154151546|ref|YP_001405164.1| - 0.00068 18.8 1.0 0.0022 17.2 0.4 2.0 2 1 0 2 2 2 1 Protein of unknown function, DUF258 AAA_16 PF13191.1 gi|154151546|ref|YP_001405164.1| - 0.00085 19.3 0.7 0.0025 17.8 0.5 1.9 1 1 0 1 1 1 1 AAA ATPase domain MMR_HSR1 PF01926.18 gi|154151546|ref|YP_001405164.1| - 0.00085 19.2 0.2 0.0025 17.7 0.2 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_25 PF13481.1 gi|154151546|ref|YP_001405164.1| - 0.0014 18.0 0.1 0.015 14.6 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.1 gi|154151546|ref|YP_001405164.1| - 0.002 18.4 0.1 0.12 12.7 0.1 2.1 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.1 gi|154151546|ref|YP_001405164.1| - 0.0041 17.4 0.1 0.0069 16.7 0.1 1.3 1 0 0 1 1 1 1 AAA domain AAA_10 PF12846.2 gi|154151546|ref|YP_001405164.1| - 0.0053 16.2 0.2 0.038 13.4 0.1 2.0 2 0 0 2 2 2 1 AAA-like domain Arch_ATPase PF01637.13 gi|154151546|ref|YP_001405164.1| - 0.0061 16.2 0.1 0.066 12.8 0.0 2.0 2 0 0 2 2 2 1 Archaeal ATPase FtsK_SpoIIIE PF01580.13 gi|154151546|ref|YP_001405164.1| - 0.01 15.2 0.2 0.02 14.4 0.1 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_19 PF13245.1 gi|154151546|ref|YP_001405164.1| - 0.011 15.4 1.9 0.013 15.2 0.2 1.9 3 0 0 3 3 1 0 Part of AAA domain AAA_17 PF13207.1 gi|154151546|ref|YP_001405164.1| - 0.013 16.2 0.4 0.031 15.0 0.3 1.6 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.17 gi|154151546|ref|YP_001405164.1| - 0.015 14.1 0.2 0.13 11.1 0.2 1.9 2 0 0 2 2 2 0 NB-ARC domain AAA_33 PF13671.1 gi|154151546|ref|YP_001405164.1| - 0.021 14.7 0.2 0.037 13.9 0.1 1.7 1 1 0 1 1 1 0 AAA domain NACHT PF05729.7 gi|154151546|ref|YP_001405164.1| - 0.024 14.3 0.2 0.048 13.3 0.1 1.5 1 0 0 1 1 1 0 NACHT domain IstB_IS21 PF01695.12 gi|154151546|ref|YP_001405164.1| - 0.025 13.9 0.0 0.24 10.8 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein cobW PF02492.14 gi|154151546|ref|YP_001405164.1| - 0.03 13.7 0.1 0.05 13.0 0.1 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain SbcCD_C PF13558.1 gi|154151546|ref|YP_001405164.1| - 0.033 14.1 0.4 0.14 12.1 0.3 2.0 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit KaiC PF06745.8 gi|154151546|ref|YP_001405164.1| - 0.033 13.2 0.4 1.7 7.6 0.0 2.1 2 0 0 2 2 2 0 KaiC T2SE PF00437.15 gi|154151546|ref|YP_001405164.1| - 0.037 12.9 0.5 0.066 12.1 0.4 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA PF00004.24 gi|154151546|ref|YP_001405164.1| - 0.043 14.0 0.2 2.8 8.1 0.0 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) MobB PF03205.9 gi|154151546|ref|YP_001405164.1| - 0.044 13.4 0.2 0.1 12.2 0.1 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B Zeta_toxin PF06414.7 gi|154151546|ref|YP_001405164.1| - 0.061 12.4 0.6 0.19 10.7 0.1 1.8 2 0 0 2 2 2 0 Zeta toxin AAA_15 PF13175.1 gi|154151546|ref|YP_001405164.1| - 0.063 12.3 0.0 1.2 8.1 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain PduV-EutP PF10662.4 gi|154151546|ref|YP_001405164.1| - 0.072 12.5 0.1 0.14 11.6 0.1 1.4 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation Miro PF08477.8 gi|154151546|ref|YP_001405164.1| - 0.082 13.4 0.1 0.2 12.1 0.1 1.6 1 0 0 1 1 1 0 Miro-like protein ATP-synt_ab PF00006.20 gi|154151546|ref|YP_001405164.1| - 0.12 11.9 0.8 0.19 11.1 0.6 1.3 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain Fer4_NifH PF00142.13 gi|154151547|ref|YP_001405165.1| - 5.4e-100 334.0 0.0 6.7e-100 333.7 0.0 1.0 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CbiA PF01656.18 gi|154151547|ref|YP_001405165.1| - 8.2e-09 35.1 0.0 1.2e-08 34.6 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ArsA_ATPase PF02374.10 gi|154151547|ref|YP_001405165.1| - 2.3e-06 26.8 0.1 4.5e-06 25.9 0.1 1.4 1 0 0 1 1 1 1 Anion-transporting ATPase MipZ PF09140.6 gi|154151547|ref|YP_001405165.1| - 0.0014 17.7 0.0 0.0025 16.9 0.0 1.3 1 0 0 1 1 1 1 ATPase MipZ ArgK PF03308.11 gi|154151547|ref|YP_001405165.1| - 0.002 16.9 0.1 0.0033 16.2 0.1 1.2 1 0 0 1 1 1 1 ArgK protein AAA_31 PF13614.1 gi|154151547|ref|YP_001405165.1| - 0.0031 17.4 0.0 0.0075 16.2 0.0 1.6 2 0 0 2 2 2 1 AAA domain AAA_10 PF12846.2 gi|154151547|ref|YP_001405165.1| - 0.0065 15.9 0.1 0.0094 15.4 0.0 1.2 1 0 0 1 1 1 1 AAA-like domain AAA_16 PF13191.1 gi|154151547|ref|YP_001405165.1| - 0.017 15.1 0.2 0.073 13.0 0.0 1.9 2 0 0 2 2 2 0 AAA ATPase domain NB-ARC PF00931.17 gi|154151547|ref|YP_001405165.1| - 0.021 13.6 0.3 0.094 11.5 0.1 1.9 2 0 0 2 2 2 0 NB-ARC domain AAA_30 PF13604.1 gi|154151547|ref|YP_001405165.1| - 0.06 12.9 0.1 8.3 5.9 0.1 2.2 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.17 gi|154151547|ref|YP_001405165.1| - 0.1 11.9 0.1 0.75 9.2 0.0 2.2 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_24 PF13479.1 gi|154151547|ref|YP_001405165.1| - 0.1 12.1 0.1 0.21 11.1 0.1 1.5 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.12 gi|154151547|ref|YP_001405165.1| - 0.11 12.3 1.0 0.55 9.9 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function DUF87 NTPase_1 PF03266.10 gi|154151547|ref|YP_001405165.1| - 0.13 11.9 0.3 0.37 10.4 0.0 1.9 2 0 0 2 2 2 0 NTPase AAA_25 PF13481.1 gi|154151547|ref|YP_001405165.1| - 0.15 11.4 0.2 0.41 10.0 0.0 1.8 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.17 gi|154151547|ref|YP_001405165.1| - 0.18 12.0 0.3 0.58 10.3 0.1 1.9 2 0 0 2 2 2 0 RNA helicase AAA_17 PF13207.1 gi|154151547|ref|YP_001405165.1| - 0.33 11.7 2.5 0.29 11.9 0.4 2.0 2 2 0 2 2 2 0 AAA domain Oxidored_nitro PF00148.14 gi|154151548|ref|YP_001405166.1| - 3.6e-67 226.7 0.0 4.8e-67 226.3 0.0 1.1 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Oxidored_nitro PF00148.14 gi|154151549|ref|YP_001405167.1| - 3.5e-70 236.6 0.0 4.4e-70 236.3 0.0 1.0 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase ABC_tran PF00005.22 gi|154151550|ref|YP_001405168.1| - 2.7e-30 105.4 0.0 5.8e-30 104.3 0.0 1.5 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.1 gi|154151550|ref|YP_001405168.1| - 7.5e-11 42.5 0.2 0.0001 22.3 0.1 2.1 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|154151550|ref|YP_001405168.1| - 4.4e-05 22.8 0.3 0.24 10.6 0.1 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.1 gi|154151550|ref|YP_001405168.1| - 0.00027 20.4 0.2 0.0007 19.0 0.1 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.1 gi|154151550|ref|YP_001405168.1| - 0.00081 18.8 0.2 0.0059 16.0 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.1 gi|154151550|ref|YP_001405168.1| - 0.0014 17.7 0.2 0.1 11.6 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain DUF258 PF03193.11 gi|154151550|ref|YP_001405168.1| - 0.0028 16.8 0.1 0.0061 15.7 0.1 1.6 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_16 PF13191.1 gi|154151550|ref|YP_001405168.1| - 0.0031 17.5 0.1 0.0065 16.4 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA PF00004.24 gi|154151550|ref|YP_001405168.1| - 0.015 15.4 0.1 0.015 15.4 0.1 2.4 2 1 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.1 gi|154151550|ref|YP_001405168.1| - 0.025 14.8 0.0 0.038 14.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain SbcCD_C PF13558.1 gi|154151550|ref|YP_001405168.1| - 0.074 12.9 0.3 0.34 10.8 0.2 2.0 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Arch_ATPase PF01637.13 gi|154151550|ref|YP_001405168.1| - 0.11 12.2 0.0 0.25 11.0 0.0 1.5 1 0 0 1 1 1 0 Archaeal ATPase Rad17 PF03215.10 gi|154151550|ref|YP_001405168.1| - 0.13 10.9 0.1 0.18 10.4 0.1 1.2 1 0 0 1 1 1 0 Rad17 cell cycle checkpoint protein AAA_22 PF13401.1 gi|154151550|ref|YP_001405168.1| - 0.14 12.3 0.3 0.53 10.4 0.0 2.0 2 0 0 2 2 2 0 AAA domain Miro PF08477.8 gi|154151550|ref|YP_001405168.1| - 0.15 12.5 0.1 0.4 11.2 0.0 1.7 2 0 0 2 2 2 0 Miro-like protein BPD_transp_1 PF00528.17 gi|154151551|ref|YP_001405169.1| - 4.2e-25 88.3 15.0 4.2e-25 88.3 10.4 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component FtsX PF02687.16 gi|154151551|ref|YP_001405169.1| - 4.9 6.9 28.3 0.19 11.5 6.1 2.8 2 1 1 3 3 3 0 FtsX-like permease family DUF2583 PF10762.4 gi|154151551|ref|YP_001405169.1| - 7.1 6.8 8.4 0.8 9.8 1.2 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF2583) NMT1_2 PF13379.1 gi|154151552|ref|YP_001405170.1| - 9.7e-14 51.3 0.0 2.7e-12 46.5 0.0 2.0 1 1 0 2 2 2 1 NMT1-like family NMT1 PF09084.6 gi|154151552|ref|YP_001405170.1| - 1.5e-11 44.3 0.0 3.5e-11 43.1 0.0 1.6 1 1 0 1 1 1 1 NMT1/THI5 like Phosphonate-bd PF12974.2 gi|154151552|ref|YP_001405170.1| - 4.5e-08 32.7 0.0 0.00058 19.3 0.0 2.2 1 1 0 2 2 2 2 ABC transporter, phosphonate, periplasmic substrate-binding protein SBP_bac_5 PF00496.17 gi|154151552|ref|YP_001405170.1| - 0.00047 19.0 0.1 0.00084 18.2 0.0 1.4 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle DUF4350 PF14258.1 gi|154151552|ref|YP_001405170.1| - 0.061 13.5 0.0 0.14 12.3 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4350) DUF4399 PF14347.1 gi|154151553|ref|YP_001405171.1| - 3.5e-19 68.5 0.3 6.1e-19 67.8 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4399) BiPBP_C PF06832.7 gi|154151553|ref|YP_001405171.1| - 0.017 15.0 0.4 0.23 11.4 0.3 2.3 1 1 0 1 1 1 0 Penicillin-Binding Protein C-terminus Family CBM_6 PF03422.10 gi|154151553|ref|YP_001405171.1| - 1.7 8.7 5.8 0.25 11.4 0.9 1.8 2 0 0 2 2 2 0 Carbohydrate binding module (family 6) Big_5 PF13205.1 gi|154151553|ref|YP_001405171.1| - 3.6 8.2 9.6 0.18 12.4 1.4 2.2 2 0 0 2 2 2 0 Bacterial Ig-like domain FtsX PF02687.16 gi|154151554|ref|YP_001405172.1| - 5.2e-11 42.3 15.2 5.2e-11 42.3 10.5 1.8 2 0 0 2 2 2 1 FtsX-like permease family MacB_PCD PF12704.2 gi|154151554|ref|YP_001405172.1| - 5.5e-08 32.6 0.0 5.5e-08 32.6 0.0 2.7 3 0 0 3 3 3 1 MacB-like periplasmic core domain BPD_transp_1 PF00528.17 gi|154151554|ref|YP_001405172.1| - 1.5 8.2 14.5 0.022 14.2 1.4 2.8 3 0 0 3 3 3 0 Binding-protein-dependent transport system inner membrane component PAS_9 PF13426.1 gi|154151555|ref|YP_001405173.1| - 6.7e-42 142.0 0.0 3.3e-17 62.7 0.0 4.4 4 0 0 4 4 4 4 PAS domain PAS_4 PF08448.5 gi|154151555|ref|YP_001405173.1| - 1.2e-41 141.1 0.0 4e-16 59.0 0.0 4.4 4 1 0 4 4 4 4 PAS fold PAS PF00989.19 gi|154151555|ref|YP_001405173.1| - 3.9e-29 100.7 0.0 1.6e-09 37.5 0.0 4.9 4 1 0 4 4 4 4 PAS fold PAS_8 PF13188.1 gi|154151555|ref|YP_001405173.1| - 3.4e-19 67.9 0.0 5e-05 23.0 0.0 4.4 4 0 0 4 4 4 4 PAS domain PAS_3 PF08447.6 gi|154151555|ref|YP_001405173.1| - 3.6e-10 39.7 0.0 0.00044 20.2 0.0 3.8 4 1 0 4 4 4 2 PAS fold HTH_IclR PF09339.5 gi|154151555|ref|YP_001405173.1| - 0.0034 16.9 0.0 0.0078 15.7 0.0 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain TBPIP PF07106.8 gi|154151555|ref|YP_001405173.1| - 0.05 13.1 0.0 0.082 12.4 0.0 1.2 1 0 0 1 1 1 0 Tat binding protein 1(TBP-1)-interacting protein (TBPIP) TrmB PF01978.14 gi|154151555|ref|YP_001405173.1| - 0.059 13.0 0.0 0.12 12.1 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_45 PF14947.1 gi|154151555|ref|YP_001405173.1| - 0.087 12.6 0.1 0.17 11.7 0.1 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix FeoC PF09012.5 gi|154151555|ref|YP_001405173.1| - 0.13 11.9 0.0 0.26 11.0 0.0 1.4 1 0 0 1 1 1 0 FeoC like transcriptional regulator FMN_red PF03358.10 gi|154151556|ref|YP_001405174.1| - 8.1e-20 70.8 0.0 1e-19 70.5 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|154151556|ref|YP_001405174.1| - 5.2e-07 29.3 0.0 6.8e-07 28.9 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_4 PF12682.2 gi|154151556|ref|YP_001405174.1| - 0.075 12.3 0.0 0.35 10.2 0.0 1.9 2 0 0 2 2 2 0 Flavodoxin MFS_1 PF07690.11 gi|154151557|ref|YP_001405175.1| - 2.9e-54 184.1 46.3 6.7e-54 182.9 32.1 1.6 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|154151557|ref|YP_001405175.1| - 7.7e-06 24.7 19.7 7.7e-06 24.7 13.6 2.6 2 2 0 2 2 2 1 Sugar (and other) transporter MFS_3 PF05977.8 gi|154151557|ref|YP_001405175.1| - 6.4e-05 21.2 12.1 0.0001 20.5 8.4 1.3 1 0 0 1 1 1 1 Transmembrane secretion effector MFS_2 PF13347.1 gi|154151557|ref|YP_001405175.1| - 0.052 11.9 44.5 0.72 8.1 10.5 3.1 1 1 1 2 2 2 0 MFS/sugar transport protein Pam17 PF08566.5 gi|154151557|ref|YP_001405175.1| - 2 8.1 4.2 2.1 7.9 1.1 2.3 2 0 0 2 2 2 0 Mitochondrial import protein Pam17 Aldo_ket_red PF00248.16 gi|154151558|ref|YP_001405176.1| - 1.6e-42 145.2 0.0 2e-42 144.9 0.0 1.1 1 0 0 1 1 1 1 Aldo/keto reductase family Fer4_17 PF13534.1 gi|154151558|ref|YP_001405176.1| - 7e-09 35.9 9.3 1.5e-08 34.8 6.4 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|154151558|ref|YP_001405176.1| - 7.4e-07 29.3 11.4 1.4e-06 28.4 7.9 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.1 gi|154151558|ref|YP_001405176.1| - 1.3e-06 28.2 9.3 2.5e-06 27.4 6.4 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Amidohydro_2 PF04909.9 gi|154151558|ref|YP_001405176.1| - 0.0033 17.0 0.2 0.21 11.1 0.0 2.6 1 1 1 2 2 2 1 Amidohydrolase Fer4_10 PF13237.1 gi|154151558|ref|YP_001405176.1| - 0.021 14.6 12.0 0.073 12.8 8.5 1.8 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4 PF00037.22 gi|154151558|ref|YP_001405176.1| - 0.025 14.1 14.6 0.027 14.0 5.1 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.1 gi|154151558|ref|YP_001405176.1| - 0.071 13.5 10.2 0.077 13.4 2.3 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|154151558|ref|YP_001405176.1| - 1 9.8 19.5 5.6 7.5 5.5 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_7 PF12838.2 gi|154151558|ref|YP_001405176.1| - 4.1 7.8 17.4 0.99 9.8 4.3 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_2 PF12797.2 gi|154151558|ref|YP_001405176.1| - 7 6.7 18.8 7 6.7 5.9 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain 2-Hacid_dh_C PF02826.14 gi|154151559|ref|YP_001405177.1| - 4e-48 162.9 0.0 5.7e-48 162.4 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.25 gi|154151559|ref|YP_001405177.1| - 3.3e-17 62.1 0.0 4.2e-17 61.8 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ThiF PF00899.16 gi|154151559|ref|YP_001405177.1| - 0.00072 19.3 2.1 0.0072 16.1 0.8 2.5 2 1 1 3 3 3 1 ThiF family Shikimate_DH PF01488.15 gi|154151559|ref|YP_001405177.1| - 0.0014 18.7 0.1 0.16 12.0 0.1 2.4 2 1 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase NAD_binding_2 PF03446.10 gi|154151559|ref|YP_001405177.1| - 0.0017 18.2 0.0 0.0032 17.3 0.0 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_10 PF13460.1 gi|154151559|ref|YP_001405177.1| - 0.0027 17.7 0.2 0.0053 16.7 0.1 1.5 1 0 0 1 1 1 1 NADH(P)-binding adh_short PF00106.20 gi|154151559|ref|YP_001405177.1| - 0.028 14.3 0.3 0.044 13.7 0.2 1.4 1 0 0 1 1 1 0 short chain dehydrogenase IlvN PF07991.7 gi|154151559|ref|YP_001405177.1| - 0.039 13.3 0.0 0.078 12.3 0.0 1.5 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, catalytic domain NAD_binding_7 PF13241.1 gi|154151559|ref|YP_001405177.1| - 0.049 13.8 0.2 0.12 12.6 0.0 1.6 2 0 0 2 2 1 0 Putative NAD(P)-binding F420_oxidored PF03807.12 gi|154151559|ref|YP_001405177.1| - 0.06 13.7 0.1 0.17 12.3 0.0 1.8 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent XdhC_C PF13478.1 gi|154151559|ref|YP_001405177.1| - 0.086 13.1 0.0 0.26 11.6 0.0 1.8 1 1 0 1 1 1 0 XdhC Rossmann domain TrkA_N PF02254.13 gi|154151559|ref|YP_001405177.1| - 0.093 12.7 0.7 0.18 11.8 0.0 1.9 2 0 0 2 2 2 0 TrkA-N domain ApbA PF02558.11 gi|154151559|ref|YP_001405177.1| - 0.094 12.1 0.1 0.19 11.1 0.1 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA TPR_16 PF13432.1 gi|154151560|ref|YP_001405178.1| - 8.9e-17 61.2 9.0 4.2e-09 36.8 0.0 3.9 1 1 3 4 4 4 3 Tetratricopeptide repeat TPR_11 PF13414.1 gi|154151560|ref|YP_001405178.1| - 1.1e-16 60.1 4.4 2.1e-06 27.2 0.7 3.8 1 1 3 4 4 4 3 TPR repeat TPR_14 PF13428.1 gi|154151560|ref|YP_001405178.1| - 3.2e-15 55.2 10.6 3.7e-06 27.0 0.0 4.9 2 2 3 5 5 5 3 Tetratricopeptide repeat TPR_2 PF07719.12 gi|154151560|ref|YP_001405178.1| - 1.6e-12 46.2 0.4 0.04 13.8 0.0 4.4 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_19 PF14559.1 gi|154151560|ref|YP_001405178.1| - 3.4e-11 43.3 11.2 1.5e-08 34.8 1.3 2.9 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.23 gi|154151560|ref|YP_001405178.1| - 1.7e-08 33.7 0.5 0.0035 16.8 0.0 4.0 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_17 PF13431.1 gi|154151560|ref|YP_001405178.1| - 7.9e-08 31.9 3.7 0.004 17.2 0.1 4.4 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_12 PF13424.1 gi|154151560|ref|YP_001405178.1| - 1.5e-06 28.0 3.1 0.00053 19.8 0.0 3.4 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.1 gi|154151560|ref|YP_001405178.1| - 2e-05 24.7 7.6 0.0036 17.6 0.1 4.2 5 0 0 5 5 4 1 Tetratricopeptide repeat TPR_7 PF13176.1 gi|154151560|ref|YP_001405178.1| - 3.5e-05 23.2 1.8 1.3 9.0 0.0 4.2 4 1 1 5 5 4 2 Tetratricopeptide repeat TPR_8 PF13181.1 gi|154151560|ref|YP_001405178.1| - 0.0003 20.3 0.4 5 7.1 0.0 4.1 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_15 PF13429.1 gi|154151560|ref|YP_001405178.1| - 0.00044 19.3 3.0 0.002 17.2 0.5 2.5 1 1 1 2 2 2 1 Tetratricopeptide repeat Apc3 PF12895.2 gi|154151560|ref|YP_001405178.1| - 0.0051 16.9 0.9 0.84 9.8 0.0 2.5 2 1 0 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 BTAD PF03704.12 gi|154151560|ref|YP_001405178.1| - 0.0056 16.9 1.0 0.0094 16.2 0.1 1.8 2 0 0 2 2 2 1 Bacterial transcriptional activator domain TPR_9 PF13371.1 gi|154151560|ref|YP_001405178.1| - 0.031 14.1 4.7 0.13 12.0 0.3 2.8 3 0 0 3 3 3 0 Tetratricopeptide repeat DUF1491 PF07372.7 gi|154151560|ref|YP_001405178.1| - 0.04 13.8 0.0 0.14 12.1 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1491) TPR_10 PF13374.1 gi|154151560|ref|YP_001405178.1| - 0.041 13.8 5.0 0.9 9.5 0.3 4.0 4 0 0 4 4 4 0 Tetratricopeptide repeat SHNi-TPR PF10516.4 gi|154151560|ref|YP_001405178.1| - 0.064 12.5 0.0 0.14 11.3 0.0 1.6 1 0 0 1 1 1 0 SHNi-TPR Fis1_TPR_C PF14853.1 gi|154151560|ref|YP_001405178.1| - 0.083 12.7 0.0 0.48 10.3 0.0 2.2 2 0 0 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat TPR_4 PF07721.9 gi|154151560|ref|YP_001405178.1| - 1.1 9.8 5.6 1.6 9.4 0.0 3.7 4 0 0 4 4 3 0 Tetratricopeptide repeat DUF3366 PF11846.3 gi|154151560|ref|YP_001405178.1| - 8.3 6.2 6.8 36 4.1 4.6 2.3 1 1 0 1 1 1 0 Domain of unknown function (DUF3366) SYCE1 PF15233.1 gi|154151561|ref|YP_001405179.1| - 0.71 9.7 6.9 0.76 9.6 4.8 1.0 1 0 0 1 1 1 0 Synaptonemal complex central element protein 1 NiFeSe_Hases PF00374.14 gi|154151562|ref|YP_001405180.1| - 3.5e-34 118.4 1.7 4.6e-13 48.7 0.2 3.7 2 1 1 3 3 3 3 Nickel-dependent hydrogenase DUF1508 PF07411.7 gi|154151563|ref|YP_001405181.1| - 0.00036 19.9 2.1 0.0004 19.7 0.6 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF1508) DUF4234 PF14018.1 gi|154151566|ref|YP_001405184.1| - 0.01 15.5 0.0 0.012 15.3 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4234) TPR_12 PF13424.1 gi|154151567|ref|YP_001405185.1| - 1.3e-44 150.0 21.4 2.3e-08 33.8 1.5 9.0 3 2 8 11 11 11 11 Tetratricopeptide repeat TPR_2 PF07719.12 gi|154151567|ref|YP_001405185.1| - 4.4e-31 104.2 14.8 7.4e-05 22.3 0.3 12.7 13 0 0 13 13 13 7 Tetratricopeptide repeat TPR_1 PF00515.23 gi|154151567|ref|YP_001405185.1| - 6.4e-29 98.3 25.4 1.5e-05 24.3 1.9 12.4 12 0 0 12 12 12 7 Tetratricopeptide repeat TPR_11 PF13414.1 gi|154151567|ref|YP_001405185.1| - 2.7e-24 84.6 37.0 5.4e-05 22.7 2.0 8.9 6 2 3 9 9 9 8 TPR repeat TPR_10 PF13374.1 gi|154151567|ref|YP_001405185.1| - 7.8e-22 76.4 11.1 0.00026 20.8 0.1 10.1 12 0 0 12 12 12 4 Tetratricopeptide repeat TPR_8 PF13181.1 gi|154151567|ref|YP_001405185.1| - 1.5e-17 62.0 37.7 0.0031 17.1 0.4 12.0 12 0 0 12 12 12 7 Tetratricopeptide repeat TPR_16 PF13432.1 gi|154151567|ref|YP_001405185.1| - 5.8e-13 49.1 0.3 0.18 12.5 0.0 7.2 7 0 0 7 7 6 3 Tetratricopeptide repeat DUF4062 PF13271.1 gi|154151567|ref|YP_001405185.1| - 1.5e-10 40.9 0.3 2.1e-09 37.2 0.1 3.0 2 1 0 2 2 2 1 Domain of unknown function (DUF4062) TPR_7 PF13176.1 gi|154151567|ref|YP_001405185.1| - 4.2e-10 38.6 14.9 0.21 11.4 0.1 9.7 10 0 0 10 10 8 1 Tetratricopeptide repeat TPR_14 PF13428.1 gi|154151567|ref|YP_001405185.1| - 1.4e-08 34.6 0.0 2.8 8.8 0.0 8.2 9 0 0 9 9 9 1 Tetratricopeptide repeat TPR_19 PF14559.1 gi|154151567|ref|YP_001405185.1| - 5.5e-07 29.8 11.7 0.61 10.4 0.1 7.0 6 3 3 9 9 9 3 Tetratricopeptide repeat TPR_17 PF13431.1 gi|154151567|ref|YP_001405185.1| - 3.6e-06 26.7 25.6 0.38 11.0 0.1 10.3 10 0 0 10 10 9 1 Tetratricopeptide repeat AAA_16 PF13191.1 gi|154151567|ref|YP_001405185.1| - 1e-05 25.6 0.2 7.6e-05 22.7 0.0 2.6 2 1 0 2 2 2 1 AAA ATPase domain TPR_6 PF13174.1 gi|154151567|ref|YP_001405185.1| - 0.00039 20.6 3.1 18 6.0 0.0 6.7 7 0 0 7 7 6 0 Tetratricopeptide repeat TIR_2 PF13676.1 gi|154151567|ref|YP_001405185.1| - 0.092 12.9 0.0 0.22 11.7 0.0 1.7 1 0 0 1 1 1 0 TIR domain GA PF01468.12 gi|154151567|ref|YP_001405185.1| - 6.2 7.0 7.7 1.2 9.3 1.1 3.0 3 0 0 3 3 2 0 GA module DUF1230 PF06799.6 gi|154151568|ref|YP_001405186.1| - 0.77 9.6 6.5 3.4 7.5 0.4 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF1230) DUF423 PF04241.10 gi|154151568|ref|YP_001405186.1| - 1.9 8.4 16.2 0.92 9.4 0.3 3.9 3 3 0 3 3 3 0 Protein of unknown function (DUF423) PEGA PF08308.6 gi|154151569|ref|YP_001405187.1| - 6.1e-09 35.5 0.1 0.00013 21.7 0.0 2.7 2 1 0 2 2 2 2 PEGA domain CarboxypepD_reg PF13620.1 gi|154151569|ref|YP_001405187.1| - 0.00069 19.6 0.5 0.002 18.1 0.1 2.0 2 0 0 2 2 2 1 Carboxypeptidase regulatory-like domain Mfa2 PF08842.5 gi|154151569|ref|YP_001405187.1| - 0.085 12.2 0.9 0.18 11.1 0.5 1.6 1 1 1 2 2 2 0 Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 Asp_Glu_race PF01177.17 gi|154151570|ref|YP_001405188.1| - 9.4e-37 127.0 0.0 1.1e-36 126.7 0.0 1.0 1 0 0 1 1 1 1 Asp/Glu/Hydantoin racemase Response_reg PF00072.19 gi|154151571|ref|YP_001405189.1| - 2.9e-23 82.0 0.8 7.3e-23 80.7 0.6 1.7 1 0 0 1 1 1 1 Response regulator receiver domain TPR_11 PF13414.1 gi|154151571|ref|YP_001405189.1| - 4.6e-20 71.0 4.6 2e-10 40.1 0.1 4.0 1 1 3 5 5 5 4 TPR repeat TPR_19 PF14559.1 gi|154151571|ref|YP_001405189.1| - 1.5e-17 63.6 5.4 4.3e-06 26.9 0.2 3.3 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_1 PF00515.23 gi|154151571|ref|YP_001405189.1| - 1.8e-17 62.0 3.8 0.00091 18.7 0.1 6.3 6 0 0 6 6 6 5 Tetratricopeptide repeat TPR_16 PF13432.1 gi|154151571|ref|YP_001405189.1| - 2e-17 63.3 0.0 2.2e-08 34.5 0.0 3.4 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.12 gi|154151571|ref|YP_001405189.1| - 7.2e-15 53.6 4.7 0.00012 21.6 0.1 5.9 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_14 PF13428.1 gi|154151571|ref|YP_001405189.1| - 1.6e-13 49.9 1.8 0.0024 18.3 0.0 5.1 2 1 3 5 5 4 3 Tetratricopeptide repeat TPR_12 PF13424.1 gi|154151571|ref|YP_001405189.1| - 1.7e-12 47.1 3.4 0.0014 18.4 0.2 4.6 3 2 1 4 4 4 4 Tetratricopeptide repeat TPR_8 PF13181.1 gi|154151571|ref|YP_001405189.1| - 3.5e-11 42.0 3.1 0.027 14.2 0.1 5.3 3 2 2 5 5 5 3 Tetratricopeptide repeat TPR_9 PF13371.1 gi|154151571|ref|YP_001405189.1| - 5.1e-11 42.2 0.0 0.012 15.4 0.0 3.3 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_17 PF13431.1 gi|154151571|ref|YP_001405189.1| - 7.7e-11 41.3 3.7 0.0057 16.7 0.0 6.3 7 0 0 7 7 6 1 Tetratricopeptide repeat TPR_6 PF13174.1 gi|154151571|ref|YP_001405189.1| - 2.7e-08 33.7 1.4 0.05 14.0 0.1 4.9 5 0 0 5 5 5 1 Tetratricopeptide repeat NARP1 PF12569.3 gi|154151571|ref|YP_001405189.1| - 5.1e-08 32.1 1.8 0.009 14.8 0.0 3.0 1 1 2 3 3 3 2 NMDA receptor-regulated protein 1 TPR_15 PF13429.1 gi|154151571|ref|YP_001405189.1| - 5.2e-06 25.7 1.4 0.37 9.8 0.2 3.7 2 1 2 4 4 4 3 Tetratricopeptide repeat Apc3 PF12895.2 gi|154151571|ref|YP_001405189.1| - 7.9e-05 22.7 1.5 0.0061 16.6 0.4 2.6 2 0 0 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.1 gi|154151571|ref|YP_001405189.1| - 8.7e-05 22.0 0.1 0.53 10.2 0.0 3.6 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_20 PF14561.1 gi|154151571|ref|YP_001405189.1| - 0.0001 22.3 1.9 4 7.6 0.0 3.7 3 1 1 4 4 4 1 Tetratricopeptide repeat TPR_3 PF07720.7 gi|154151571|ref|YP_001405189.1| - 0.00015 21.4 1.4 0.00041 20.0 0.9 1.8 1 0 0 1 1 1 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.1 gi|154151571|ref|YP_001405189.1| - 0.0017 18.1 1.8 1.9 8.4 0.0 3.8 4 0 0 4 4 4 1 Fis1 C-terminal tetratricopeptide repeat NRDE-2 PF08424.5 gi|154151571|ref|YP_001405189.1| - 0.0021 16.9 0.5 0.033 13.0 0.5 2.3 2 0 0 2 2 2 1 NRDE-2, necessary for RNA interference ChAPs PF09295.5 gi|154151571|ref|YP_001405189.1| - 0.003 16.4 0.1 1.6 7.4 0.0 2.1 1 1 1 2 2 2 2 ChAPs (Chs5p-Arf1p-binding proteins) DUF3856 PF12968.2 gi|154151571|ref|YP_001405189.1| - 0.048 13.4 0.8 8.3 6.2 0.1 3.5 2 1 1 3 3 3 0 Domain of Unknown Function (DUF3856) Dockerin_1 PF00404.13 gi|154151571|ref|YP_001405189.1| - 0.12 12.0 0.9 0.29 10.9 0.6 1.7 1 0 0 1 1 1 0 Dockerin type I repeat TOM20_plant PF06552.7 gi|154151571|ref|YP_001405189.1| - 0.15 11.5 0.8 30 4.1 0.0 3.3 4 1 0 4 4 4 0 Plant specific mitochondrial import receptor subunit TOM20 TPR_21 PF09976.4 gi|154151571|ref|YP_001405189.1| - 0.16 11.9 3.4 1.8 8.4 0.5 2.9 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_10 PF13374.1 gi|154151571|ref|YP_001405189.1| - 0.3 11.0 2.4 6.3 6.8 0.0 3.9 3 1 1 4 4 4 0 Tetratricopeptide repeat tRNA-Thr_ED PF08915.6 gi|154151572|ref|YP_001405190.1| - 2.3e-42 144.2 0.2 2.6e-42 144.0 0.1 1.0 1 0 0 1 1 1 1 Archaea-specific editing domain of threonyl-tRNA synthetase Peptidase_M17_N PF02789.12 gi|154151572|ref|YP_001405190.1| - 0.018 14.8 0.3 0.023 14.4 0.2 1.2 1 0 0 1 1 1 0 Cytosol aminopeptidase family, N-terminal domain NAD_binding_10 PF13460.1 gi|154151572|ref|YP_001405190.1| - 0.057 13.4 0.0 0.063 13.2 0.0 1.1 1 0 0 1 1 1 0 NADH(P)-binding HR1 PF02185.11 gi|154151572|ref|YP_001405190.1| - 0.084 12.6 0.1 0.13 11.9 0.0 1.3 1 0 0 1 1 1 0 Hr1 repeat GLTP PF08718.6 gi|154151572|ref|YP_001405190.1| - 0.12 12.3 0.1 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Glycolipid transfer protein (GLTP) PAP2 PF01569.16 gi|154151573|ref|YP_001405191.1| - 2.7e-18 65.8 9.7 2.7e-18 65.8 6.8 1.9 2 0 0 2 2 2 1 PAP2 superfamily PAP2_C PF14360.1 gi|154151573|ref|YP_001405191.1| - 0.091 13.0 3.1 0.26 11.6 2.2 1.8 1 0 0 1 1 1 0 PAP2 superfamily C-terminal PAP2_3 PF14378.1 gi|154151573|ref|YP_001405191.1| - 0.11 11.9 11.7 0.052 13.0 5.4 2.2 2 1 0 2 2 2 0 PAP2 superfamily DUF4149 PF13664.1 gi|154151573|ref|YP_001405191.1| - 7.7 6.6 13.2 13 5.9 5.8 3.1 2 2 0 2 2 2 0 Domain of unknown function (DUF4149) Arginase PF00491.16 gi|154151574|ref|YP_001405192.1| - 1.6e-82 276.9 0.1 2e-82 276.6 0.1 1.0 1 0 0 1 1 1 1 Arginase family UPF0489 PF12640.2 gi|154151574|ref|YP_001405192.1| - 0.064 13.4 0.0 0.098 12.8 0.0 1.3 1 0 0 1 1 1 0 UPF0489 domain DUF3147 PF11345.3 gi|154151575|ref|YP_001405193.1| - 1.8e-10 40.8 6.6 2e-10 40.6 4.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3147) GlpM PF06942.7 gi|154151575|ref|YP_001405193.1| - 2.5e-07 30.9 2.6 3e-07 30.6 1.8 1.0 1 0 0 1 1 1 1 GlpM protein YbjM PF11045.3 gi|154151575|ref|YP_001405193.1| - 0.025 14.3 1.1 0.039 13.6 0.8 1.3 1 0 0 1 1 1 0 Putative inner membrane protein of Enterobacteriaceae Jiraiya PF15038.1 gi|154151575|ref|YP_001405193.1| - 0.14 11.5 0.9 0.21 11.0 0.6 1.4 1 0 0 1 1 1 0 Jiraiya DSBA PF01323.15 gi|154151576|ref|YP_001405194.1| - 4.8e-06 26.2 0.1 2.5e-05 23.9 0.0 1.9 2 0 0 2 2 2 1 DSBA-like thioredoxin domain Thioredoxin_4 PF13462.1 gi|154151576|ref|YP_001405194.1| - 1.7e-05 24.8 0.0 4.1e-05 23.6 0.0 1.7 1 1 0 1 1 1 1 Thioredoxin FUSC_2 PF13515.1 gi|154151577|ref|YP_001405195.1| - 1.1e-14 54.4 15.7 1.1e-14 54.4 10.9 1.7 1 1 1 2 2 2 1 Fusaric acid resistance protein-like DUF939 PF06081.6 gi|154151577|ref|YP_001405195.1| - 3.1e-11 43.2 14.6 4.9e-11 42.6 9.8 1.6 1 1 0 1 1 1 1 Bacterial protein of unknown function (DUF939) FUSC PF04632.7 gi|154151577|ref|YP_001405195.1| - 6.9e-05 21.4 19.1 9.4e-05 21.0 13.2 1.4 1 1 0 1 1 1 1 Fusaric acid resistance protein family Birna_VP4 PF01768.11 gi|154151577|ref|YP_001405195.1| - 0.088 11.8 0.4 0.16 11.0 0.3 1.3 1 0 0 1 1 1 0 Birnavirus VP4 protein ALMT PF11744.3 gi|154151577|ref|YP_001405195.1| - 3.8 6.0 15.4 9.7 4.7 10.7 1.6 1 1 0 1 1 1 0 Aluminium activated malate transporter Peptidase_A24 PF01478.13 gi|154151577|ref|YP_001405195.1| - 6.6 6.9 16.3 6.8 6.9 7.2 2.9 1 1 1 2 2 2 0 Type IV leader peptidase family CARDB PF07705.6 gi|154151578|ref|YP_001405196.1| - 0.0023 17.9 8.3 0.65 10.0 0.1 4.2 2 1 1 3 3 3 3 CARDB CCDC14 PF15254.1 gi|154151578|ref|YP_001405196.1| - 0.14 10.4 0.4 0.2 9.9 0.3 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 14 MacB_PCD PF12704.2 gi|154151579|ref|YP_001405197.1| - 5.9e-29 101.3 6.8 5.9e-29 101.3 4.7 2.2 2 0 0 2 2 2 2 MacB-like periplasmic core domain FtsX PF02687.16 gi|154151579|ref|YP_001405197.1| - 1.3e-20 73.3 14.1 1.9e-20 72.8 6.0 2.3 2 0 0 2 2 2 1 FtsX-like permease family DUF4134 PF13572.1 gi|154151579|ref|YP_001405197.1| - 0.061 13.4 0.2 0.061 13.4 0.1 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF4134) SET PF00856.23 gi|154151580|ref|YP_001405198.1| - 3.2e-17 63.2 0.1 8.2e-15 55.4 0.1 2.2 1 1 0 1 1 1 1 SET domain SAF PF08666.7 gi|154151580|ref|YP_001405198.1| - 0.025 14.9 0.0 0.51 10.7 0.0 2.2 2 0 0 2 2 2 0 SAF domain ThiI PF02568.9 gi|154151581|ref|YP_001405199.1| - 1.8e-62 210.2 0.0 2.3e-62 209.9 0.0 1.1 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) THUMP PF02926.12 gi|154151581|ref|YP_001405199.1| - 5.6e-15 55.4 0.0 1.3e-14 54.2 0.0 1.6 1 0 0 1 1 1 1 THUMP domain QueC PF06508.8 gi|154151581|ref|YP_001405199.1| - 4.8e-07 29.2 0.0 2.3e-06 27.0 0.0 1.9 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.11 gi|154151581|ref|YP_001405199.1| - 0.0064 15.1 0.0 0.0091 14.5 0.0 1.3 1 0 0 1 1 1 1 tRNA methyl transferase UPF0172 PF03665.8 gi|154151581|ref|YP_001405199.1| - 0.15 11.5 0.1 0.24 10.8 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0172) CBS PF00571.23 gi|154151582|ref|YP_001405200.1| - 2e-27 94.6 2.0 7.8e-13 47.9 0.0 2.6 3 0 0 3 3 3 2 CBS domain Abhydrolase_1 PF00561.15 gi|154151582|ref|YP_001405200.1| - 6e-24 84.8 0.0 1e-23 84.1 0.0 1.4 1 1 0 1 1 1 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.2 gi|154151582|ref|YP_001405200.1| - 2.5e-10 40.6 0.0 3.5e-10 40.1 0.0 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_5 PF12695.2 gi|154151582|ref|YP_001405200.1| - 0.022 14.5 0.0 0.1 12.3 0.0 2.0 1 1 0 1 1 1 0 Alpha/beta hydrolase family Esterase PF00756.15 gi|154151582|ref|YP_001405200.1| - 0.054 12.9 0.0 0.12 11.8 0.0 1.5 1 0 0 1 1 1 0 Putative esterase Cys_Met_Meta_PP PF01053.15 gi|154151583|ref|YP_001405201.1| - 8.8e-145 481.8 0.0 9.9e-145 481.6 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.12 gi|154151583|ref|YP_001405201.1| - 7.4e-16 58.1 0.1 1.2e-15 57.4 0.1 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.14 gi|154151583|ref|YP_001405201.1| - 4.1e-06 25.7 0.0 7.7e-06 24.8 0.0 1.4 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.16 gi|154151583|ref|YP_001405201.1| - 2.5e-05 23.3 0.0 3.8e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.16 gi|154151583|ref|YP_001405201.1| - 0.0014 17.8 0.0 0.0044 16.2 0.0 1.8 1 1 0 1 1 1 1 Beta-eliminating lyase Met_gamma_lyase PF06838.6 gi|154151583|ref|YP_001405201.1| - 0.0025 16.1 0.7 0.42 8.8 0.1 2.2 2 0 0 2 2 2 2 Methionine gamma-lyase SLA_LP_auto_ag PF05889.8 gi|154151584|ref|YP_001405202.1| - 2.4e-18 65.7 0.0 6e-18 64.4 0.0 1.5 1 1 0 1 1 1 1 Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen) Aminotran_5 PF00266.14 gi|154151584|ref|YP_001405202.1| - 6.3e-15 54.7 0.1 1e-14 54.0 0.1 1.4 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.16 gi|154151584|ref|YP_001405202.1| - 3.1e-06 26.5 0.0 5.3e-06 25.7 0.0 1.4 1 1 0 1 1 1 1 Beta-eliminating lyase Aminotran_1_2 PF00155.16 gi|154151584|ref|YP_001405202.1| - 0.00083 18.4 0.0 0.0014 17.6 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class I and II DUF4217 PF13959.1 gi|154151584|ref|YP_001405202.1| - 0.086 12.3 0.0 0.19 11.2 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4217) Radical_SAM PF04055.16 gi|154151585|ref|YP_001405203.1| - 7.1e-12 45.8 0.1 9.7e-12 45.3 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily NeuB PF03102.9 gi|154151585|ref|YP_001405203.1| - 0.19 10.8 0.0 0.61 9.1 0.0 1.7 2 0 0 2 2 2 0 NeuB family HTH_24 PF13412.1 gi|154151587|ref|YP_001405205.1| - 1.8e-06 27.2 0.1 2.4e-06 26.8 0.1 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TFIIE_alpha PF02002.12 gi|154151587|ref|YP_001405205.1| - 0.00016 21.1 0.2 0.00022 20.7 0.1 1.3 1 1 0 1 1 1 1 TFIIE alpha subunit MarR_2 PF12802.2 gi|154151587|ref|YP_001405205.1| - 0.0027 17.3 0.0 0.0032 17.0 0.0 1.1 1 0 0 1 1 1 1 MarR family GntR PF00392.16 gi|154151587|ref|YP_001405205.1| - 0.0034 16.8 0.0 0.0042 16.4 0.0 1.2 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family TrmB PF01978.14 gi|154151587|ref|YP_001405205.1| - 0.0051 16.4 0.1 0.0066 16.1 0.1 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_9 PF08221.6 gi|154151587|ref|YP_001405205.1| - 0.063 13.1 0.1 0.092 12.6 0.0 1.3 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_11 PF08279.7 gi|154151587|ref|YP_001405205.1| - 0.09 12.4 0.0 0.1 12.2 0.0 1.1 1 0 0 1 1 1 0 HTH domain DUF2582 PF10771.4 gi|154151587|ref|YP_001405205.1| - 0.092 12.6 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2582) HTH_IclR PF09339.5 gi|154151587|ref|YP_001405205.1| - 0.1 12.1 0.0 0.14 11.7 0.0 1.1 1 0 0 1 1 1 0 IclR helix-turn-helix domain Mem_trans PF03547.13 gi|154151588|ref|YP_001405206.1| - 3.2e-37 127.7 32.4 6.9e-19 67.3 8.3 2.0 1 1 1 2 2 2 2 Membrane transport protein CMD PF02627.15 gi|154151589|ref|YP_001405207.1| - 1.6e-16 59.8 1.3 2.1e-16 59.4 0.9 1.2 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family HK PF02110.10 gi|154151589|ref|YP_001405207.1| - 0.049 12.7 1.5 0.055 12.6 1.1 1.0 1 0 0 1 1 1 0 Hydroxyethylthiazole kinase family DUF429 PF04250.8 gi|154151589|ref|YP_001405207.1| - 0.11 11.7 0.7 0.11 11.6 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF429) FmdE PF02663.9 gi|154151590|ref|YP_001405208.1| - 2.4e-40 137.4 0.0 2.9e-40 137.1 0.0 1.1 1 0 0 1 1 1 1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon zf-dskA_traR PF01258.12 gi|154151590|ref|YP_001405208.1| - 2.8e-10 39.7 1.2 7.5e-10 38.3 0.8 1.7 1 0 0 1 1 1 1 Prokaryotic dksA/traR C4-type zinc finger ArfGap PF01412.13 gi|154151590|ref|YP_001405208.1| - 0.05 13.3 0.2 0.079 12.7 0.2 1.4 1 0 0 1 1 1 0 Putative GTPase activating protein for Arf OrfB_Zn_ribbon PF07282.6 gi|154151590|ref|YP_001405208.1| - 0.15 11.7 1.4 0.34 10.6 1.0 1.6 1 0 0 1 1 1 0 Putative transposase DNA-binding domain GlutR_N PF05201.10 gi|154151591|ref|YP_001405209.1| - 0.097 12.2 0.0 0.11 12.0 0.0 1.1 1 0 0 1 1 1 0 Glutamyl-tRNAGlu reductase, N-terminal domain Peptidase_M3 PF01432.15 gi|154151592|ref|YP_001405210.1| - 3.9e-114 382.2 0.0 4.8e-114 381.9 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M3 Aminotran_5 PF00266.14 gi|154151593|ref|YP_001405211.1| - 8.1e-124 413.1 0.0 1.5e-123 412.2 0.0 1.4 2 0 0 2 2 2 1 Aminotransferase class-V PAPS_reduct PF01507.14 gi|154151593|ref|YP_001405211.1| - 1.8e-31 109.3 0.0 3.2e-31 108.4 0.0 1.5 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family DegT_DnrJ_EryC1 PF01041.12 gi|154151593|ref|YP_001405211.1| - 5.4e-11 42.1 0.1 1e-10 41.2 0.1 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.16 gi|154151593|ref|YP_001405211.1| - 1e-08 34.6 0.0 1.9e-08 33.7 0.0 1.4 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_1_2 PF00155.16 gi|154151593|ref|YP_001405211.1| - 9e-07 28.1 0.0 1.4e-06 27.5 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.15 gi|154151593|ref|YP_001405211.1| - 5.5e-06 24.9 0.0 8.4e-06 24.3 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme SLA_LP_auto_ag PF05889.8 gi|154151593|ref|YP_001405211.1| - 0.063 11.7 0.0 0.1 11.0 0.0 1.2 1 0 0 1 1 1 0 Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen) Asn_synthase PF00733.16 gi|154151593|ref|YP_001405211.1| - 0.1 12.0 0.0 0.19 11.2 0.0 1.3 1 0 0 1 1 1 0 Asparagine synthase HK PF02110.10 gi|154151594|ref|YP_001405212.1| - 7.4e-84 280.7 3.0 8.5e-84 280.5 2.1 1.0 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family Carb_kinase PF01256.12 gi|154151594|ref|YP_001405212.1| - 8.5e-05 21.9 1.1 0.00011 21.5 0.6 1.3 1 1 0 1 1 1 1 Carbohydrate kinase TMP-TENI PF02581.12 gi|154151595|ref|YP_001405213.1| - 1.8e-56 190.0 1.1 2.3e-56 189.7 0.8 1.1 1 0 0 1 1 1 1 Thiamine monophosphate synthase/TENI NMO PF03060.10 gi|154151595|ref|YP_001405213.1| - 0.0035 16.5 7.6 0.0074 15.4 5.1 1.6 1 1 0 1 1 1 1 Nitronate monooxygenase His_biosynth PF00977.16 gi|154151595|ref|YP_001405213.1| - 0.016 14.4 1.1 0.051 12.8 0.4 1.6 1 1 1 2 2 2 0 Histidine biosynthesis protein Dus PF01207.12 gi|154151595|ref|YP_001405213.1| - 0.019 13.8 0.8 0.038 12.8 0.2 1.7 2 0 0 2 2 2 0 Dihydrouridine synthase (Dus) QRPTase_C PF01729.14 gi|154151595|ref|YP_001405213.1| - 0.066 12.7 0.1 0.28 10.7 0.1 2.0 1 1 0 1 1 1 0 Quinolinate phosphoribosyl transferase, C-terminal domain Ribul_P_3_epim PF00834.14 gi|154151595|ref|YP_001405213.1| - 0.099 11.7 1.7 0.2 10.7 0.5 1.9 2 0 0 2 2 2 0 Ribulose-phosphate 3 epimerase family ThiG PF05690.9 gi|154151595|ref|YP_001405213.1| - 0.23 10.4 7.5 0.062 12.3 1.9 1.9 1 1 1 2 2 2 0 Thiazole biosynthesis protein ThiG LigD_N PF13298.1 gi|154151596|ref|YP_001405214.1| - 7.3e-36 122.4 0.1 8.9e-36 122.1 0.1 1.1 1 0 0 1 1 1 1 DNA polymerase Ligase (LigD) DUF3467 PF11950.3 gi|154151598|ref|YP_001405216.1| - 1.9e-18 66.2 0.0 2.3e-18 66.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3467) Cas_Cas4 PF01930.12 gi|154151599|ref|YP_001405217.1| - 4.9e-06 26.5 0.0 7.4e-06 25.9 0.0 1.5 1 1 0 1 1 1 1 Domain of unknown function DUF83 PDDEXK_1 PF12705.2 gi|154151599|ref|YP_001405217.1| - 5.6e-05 22.6 0.8 0.006 16.0 0.6 2.6 1 1 0 1 1 1 1 PD-(D/E)XK nuclease superfamily DUF911 PF06023.7 gi|154151599|ref|YP_001405217.1| - 0.021 14.0 0.0 0.026 13.7 0.0 1.2 1 0 0 1 1 1 0 Archaeal protein of unknown function (DUF911) HATPase_c PF02518.21 gi|154151600|ref|YP_001405218.1| - 2.6e-10 39.9 0.1 5.1e-10 39.0 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.1 gi|154151600|ref|YP_001405218.1| - 1.7e-05 24.5 0.0 5.1e-05 22.9 0.0 1.8 1 0 0 1 1 1 1 PAS domain PAS_9 PF13426.1 gi|154151600|ref|YP_001405218.1| - 0.00053 20.3 0.0 0.0013 19.0 0.0 1.7 1 0 0 1 1 1 1 PAS domain PAS PF00989.19 gi|154151600|ref|YP_001405218.1| - 0.00079 19.1 0.0 0.0017 18.0 0.0 1.7 1 0 0 1 1 1 1 PAS fold PAS_7 PF12860.2 gi|154151600|ref|YP_001405218.1| - 0.0035 17.3 0.0 0.011 15.7 0.0 1.9 1 1 0 1 1 1 1 PAS fold 5TM-5TMR_LYT PF07694.7 gi|154151600|ref|YP_001405218.1| - 0.0049 16.2 15.1 0.082 12.2 10.9 2.5 1 1 1 2 2 2 2 5TMR of 5TMR-LYT PAS_4 PF08448.5 gi|154151600|ref|YP_001405218.1| - 0.021 14.8 0.1 0.058 13.4 0.0 1.8 1 0 0 1 1 1 0 PAS fold DUF4381 PF14316.1 gi|154151600|ref|YP_001405218.1| - 0.038 14.0 0.0 0.33 11.0 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4381) Phi-29_GP16_7 PF06720.6 gi|154151600|ref|YP_001405218.1| - 0.15 11.6 0.1 0.37 10.4 0.0 1.6 1 0 0 1 1 1 0 Bacteriophage phi-29 early protein GP16.7 MARVEL PF01284.18 gi|154151600|ref|YP_001405218.1| - 0.21 11.4 6.3 0.53 10.0 0.8 2.9 3 0 0 3 3 3 0 Membrane-associating domain Radical_SAM PF04055.16 gi|154151601|ref|YP_001405219.1| - 2.3e-06 27.8 0.1 7.8e-06 26.1 0.1 2.0 2 1 0 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|154151601|ref|YP_001405219.1| - 5.5e-06 26.4 0.0 1.1e-05 25.4 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|154151601|ref|YP_001405219.1| - 0.00013 22.1 0.0 0.00023 21.2 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Prenyltransf PF01255.14 gi|154151602|ref|YP_001405220.1| - 2.8e-72 242.4 0.0 3.5e-72 242.1 0.0 1.0 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase Pox_D5 PF03288.11 gi|154151603|ref|YP_001405221.1| - 0.018 15.3 0.0 0.025 14.8 0.0 1.2 1 0 0 1 1 1 0 Poxvirus D5 protein-like Prenyltransf PF01255.14 gi|154151604|ref|YP_001405222.1| - 2.1e-24 85.9 0.0 2.4e-24 85.6 0.0 1.1 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase KaiC PF06745.8 gi|154151605|ref|YP_001405223.1| - 0.001 18.2 0.3 0.15 11.1 0.0 2.6 2 1 0 2 2 2 2 KaiC DUF257 PF03192.8 gi|154151605|ref|YP_001405223.1| - 0.017 14.4 0.2 0.03 13.6 0.2 1.4 1 0 0 1 1 1 0 Pyrococcus protein of unknown function, DUF257 Arf PF00025.16 gi|154151606|ref|YP_001405224.1| - 3.3e-09 36.2 0.0 1.7e-08 33.8 0.0 1.9 2 0 0 2 2 2 1 ADP-ribosylation factor family GTP_EFTU PF00009.22 gi|154151606|ref|YP_001405224.1| - 4.1e-09 36.1 0.1 3.4e-08 33.1 0.0 2.2 2 1 1 3 3 3 1 Elongation factor Tu GTP binding domain Ras PF00071.17 gi|154151606|ref|YP_001405224.1| - 1.2e-08 34.5 0.0 2.4e-08 33.5 0.0 1.5 1 0 0 1 1 1 1 Ras family Miro PF08477.8 gi|154151606|ref|YP_001405224.1| - 1.7e-07 31.7 0.0 5.8e-07 30.0 0.0 1.9 2 0 0 2 2 2 1 Miro-like protein ATP_bind_1 PF03029.12 gi|154151606|ref|YP_001405224.1| - 2.3e-07 30.5 0.0 8.5e-06 25.4 0.0 2.4 1 1 1 2 2 2 1 Conserved hypothetical ATP binding protein MMR_HSR1 PF01926.18 gi|154151606|ref|YP_001405224.1| - 0.0019 18.1 0.0 0.01 15.7 0.0 2.1 2 0 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.13 gi|154151606|ref|YP_001405224.1| - 0.0041 16.4 0.1 0.025 13.8 0.0 2.0 1 1 0 1 1 1 1 Ferrous iron transport protein B AAA_25 PF13481.1 gi|154151606|ref|YP_001405224.1| - 0.0098 15.3 0.3 1.7 8.0 0.0 2.5 3 0 0 3 3 3 1 AAA domain KaiC PF06745.8 gi|154151606|ref|YP_001405224.1| - 0.015 14.4 0.0 0.12 11.5 0.0 2.3 2 0 0 2 2 2 0 KaiC SRPRB PF09439.5 gi|154151606|ref|YP_001405224.1| - 0.031 13.4 0.0 0.053 12.7 0.0 1.3 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit TP_methylase PF00590.15 gi|154151607|ref|YP_001405225.1| - 3.7e-18 65.9 0.0 4.4e-18 65.7 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases DUF357 PF04010.8 gi|154151608|ref|YP_001405226.1| - 6.9e-36 121.8 0.1 2e-19 69.0 0.0 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF357) Fic PF02661.13 gi|154151608|ref|YP_001405226.1| - 0.15 12.8 0.1 4.7 7.9 0.0 2.4 2 1 0 2 2 2 0 Fic/DOC family UPF0104 PF03706.8 gi|154151609|ref|YP_001405227.1| - 2.8e-41 141.7 34.5 3.4e-41 141.4 23.9 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0104) DUF1514 PF07438.6 gi|154151609|ref|YP_001405227.1| - 1.7 8.6 10.5 1 9.2 2.7 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1514) HCV_NS4a PF01006.15 gi|154151609|ref|YP_001405227.1| - 5.6 6.5 7.5 10 5.7 0.3 3.1 2 1 1 3 3 3 0 Hepatitis C virus non-structural protein NS4a DNase-RNase PF02577.9 gi|154151610|ref|YP_001405228.1| - 3.9e-36 123.2 0.0 4.5e-36 123.0 0.0 1.0 1 0 0 1 1 1 1 Bifunctional nuclease PRA-PH PF01503.12 gi|154151611|ref|YP_001405229.1| - 3.2e-10 40.1 0.1 3.6e-10 39.9 0.0 1.1 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase MazG PF03819.12 gi|154151611|ref|YP_001405229.1| - 5.9e-05 22.9 0.3 8.3e-05 22.4 0.2 1.2 1 0 0 1 1 1 1 MazG nucleotide pyrophosphohydrolase domain Rad21_Rec8 PF04824.11 gi|154151611|ref|YP_001405229.1| - 0.039 13.1 0.0 0.056 12.6 0.0 1.3 1 0 0 1 1 1 0 Conserved region of Rad21 / Rec8 like protein KH_2 PF07650.12 gi|154151612|ref|YP_001405230.1| - 1.7e-20 72.3 4.4 1.5e-15 56.4 0.2 2.1 1 1 1 2 2 2 2 KH domain KH_5 PF13184.1 gi|154151612|ref|YP_001405230.1| - 9.3e-15 54.1 1.5 1.6e-14 53.4 0.1 1.8 2 0 0 2 2 2 1 NusA-like KH domain KH_4 PF13083.1 gi|154151612|ref|YP_001405230.1| - 5.3e-08 32.3 0.6 0.0015 18.1 0.2 2.2 2 0 0 2 2 2 2 KH domain KH_1 PF00013.24 gi|154151612|ref|YP_001405230.1| - 1.1e-06 28.1 2.7 2.4e-05 23.8 0.4 2.4 2 0 0 2 2 2 1 KH domain KH_3 PF13014.1 gi|154151612|ref|YP_001405230.1| - 0.036 13.7 5.0 0.056 13.1 0.5 2.6 2 0 0 2 2 2 0 KH domain DUF2148 PF09918.4 gi|154151612|ref|YP_001405230.1| - 0.036 13.7 0.4 1.5 8.5 0.0 2.5 2 1 0 2 2 2 0 Uncharacterized protein containing a ferredoxin domain (DUF2148) Peptidase_S24 PF00717.18 gi|154151612|ref|YP_001405230.1| - 0.092 12.3 0.0 0.23 11.1 0.1 1.7 2 0 0 2 2 2 0 Peptidase S24-like SIMPL PF04402.9 gi|154151613|ref|YP_001405231.1| - 2.7e-44 151.5 15.3 3.1e-44 151.3 10.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF541) SMC_N PF02463.14 gi|154151613|ref|YP_001405231.1| - 0.018 14.2 0.0 0.039 13.1 0.0 1.6 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain UPF0180 PF03698.8 gi|154151613|ref|YP_001405231.1| - 0.74 9.7 4.7 1.6 8.6 0.7 2.7 2 1 0 2 2 2 0 Uncharacterised protein family (UPF0180) Aconitase PF00330.15 gi|154151614|ref|YP_001405232.1| - 5.7e-87 292.1 2.5 1.3e-58 198.6 0.6 2.2 1 1 1 2 2 2 2 Aconitase family (aconitate hydratase) Aconitase_C PF00694.14 gi|154151615|ref|YP_001405233.1| - 6.8e-24 84.4 0.1 4.3e-22 78.6 0.0 2.1 1 1 1 2 2 2 2 Aconitase C-terminal domain Aconitase_2_N PF06434.8 gi|154151615|ref|YP_001405233.1| - 9.4e-06 25.1 0.5 0.00026 20.4 0.3 2.1 1 1 0 1 1 1 1 Aconitate hydratase 2 N-terminus Iso_dh PF00180.15 gi|154151616|ref|YP_001405234.1| - 8.8e-97 324.1 0.0 1e-96 323.9 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase DUF429 PF04250.8 gi|154151617|ref|YP_001405235.1| - 4.1e-38 130.7 0.0 4.8e-38 130.5 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF429) PAS_9 PF13426.1 gi|154151618|ref|YP_001405236.1| - 9.8e-18 64.4 0.0 1.8e-08 34.6 0.0 2.2 2 0 0 2 2 2 2 PAS domain PAS_4 PF08448.5 gi|154151618|ref|YP_001405236.1| - 9.9e-14 51.3 0.0 2.7e-08 33.8 0.0 2.1 2 0 0 2 2 2 2 PAS fold PAS PF00989.19 gi|154151618|ref|YP_001405236.1| - 9.4e-07 28.6 0.0 0.0015 18.2 0.0 2.4 2 1 0 2 2 2 2 PAS fold PAS_8 PF13188.1 gi|154151618|ref|YP_001405236.1| - 0.0036 17.1 0.0 0.057 13.3 0.0 2.3 2 0 0 2 2 2 1 PAS domain Oxidored_nitro PF00148.14 gi|154151620|ref|YP_001405238.1| - 2.3e-49 168.0 0.0 1.5e-48 165.4 0.0 1.8 1 1 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Oxidored_nitro PF00148.14 gi|154151621|ref|YP_001405239.1| - 3e-54 184.1 0.0 4.3e-54 183.6 0.0 1.2 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase Fer4_NifH PF00142.13 gi|154151622|ref|YP_001405240.1| - 7.8e-110 366.3 0.0 8.7e-110 366.2 0.0 1.0 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CbiA PF01656.18 gi|154151622|ref|YP_001405240.1| - 6.8e-11 41.9 0.0 1.5e-10 40.7 0.0 1.5 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ArsA_ATPase PF02374.10 gi|154151622|ref|YP_001405240.1| - 2.5e-06 26.7 0.2 5.3e-06 25.7 0.0 1.6 2 0 0 2 2 2 1 Anion-transporting ATPase AAA_31 PF13614.1 gi|154151622|ref|YP_001405240.1| - 0.00015 21.7 0.0 0.00032 20.6 0.0 1.6 2 0 0 2 2 2 1 AAA domain MipZ PF09140.6 gi|154151622|ref|YP_001405240.1| - 0.00065 18.8 0.0 0.0018 17.4 0.0 1.7 1 0 0 1 1 1 1 ATPase MipZ SRP54 PF00448.17 gi|154151622|ref|YP_001405240.1| - 0.0038 16.6 0.0 0.0063 15.9 0.0 1.4 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain YhjQ PF06564.7 gi|154151622|ref|YP_001405240.1| - 0.025 13.9 0.2 0.078 12.3 0.0 1.8 2 0 0 2 2 2 0 YhjQ protein AAA_16 PF13191.1 gi|154151622|ref|YP_001405240.1| - 0.033 14.1 0.3 0.12 12.3 0.0 1.8 2 0 0 2 2 2 0 AAA ATPase domain AAA_10 PF12846.2 gi|154151622|ref|YP_001405240.1| - 0.036 13.5 0.1 0.063 12.7 0.0 1.3 1 0 0 1 1 1 0 AAA-like domain AAA_25 PF13481.1 gi|154151622|ref|YP_001405240.1| - 0.058 12.7 0.2 0.13 11.6 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_17 PF13207.1 gi|154151622|ref|YP_001405240.1| - 0.073 13.8 0.2 0.2 12.4 0.0 1.8 2 1 0 2 2 2 0 AAA domain AAA_24 PF13479.1 gi|154151622|ref|YP_001405240.1| - 0.12 11.9 0.4 0.33 10.5 0.3 1.7 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.17 gi|154151622|ref|YP_001405240.1| - 0.15 10.8 0.0 0.23 10.2 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain TrkH PF02386.11 gi|154151623|ref|YP_001405241.1| - 8.3e-50 169.3 19.2 8.3e-50 169.3 13.3 2.0 2 0 0 2 2 2 1 Cation transport protein Desulfoferrodox PF01880.13 gi|154151624|ref|YP_001405242.1| - 4.3e-25 87.8 0.4 5.5e-25 87.4 0.3 1.1 1 0 0 1 1 1 1 Desulfoferrodoxin Desulfoferrod_N PF06397.7 gi|154151624|ref|YP_001405242.1| - 1.4e-14 53.1 6.7 2.2e-14 52.5 4.7 1.3 1 0 0 1 1 1 1 Desulfoferrodoxin, N-terminal domain DUF4543 PF15076.1 gi|154151624|ref|YP_001405242.1| - 0.1 12.6 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4543) Lactamase_B PF00753.22 gi|154151625|ref|YP_001405243.1| - 1.5e-22 80.1 0.0 2.8e-22 79.3 0.0 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.1 gi|154151625|ref|YP_001405243.1| - 5.4e-05 22.9 0.0 0.00017 21.3 0.0 1.8 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.2 gi|154151625|ref|YP_001405243.1| - 0.00017 21.1 0.2 0.00027 20.5 0.1 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain TspO_MBR PF03073.10 gi|154151626|ref|YP_001405244.1| - 2.3e-26 92.0 21.7 2.7e-26 91.8 15.0 1.0 1 0 0 1 1 1 1 TspO/MBR family TIG PF01833.19 gi|154151627|ref|YP_001405245.1| - 1.3e-10 41.0 30.3 8.6e-07 28.8 5.5 3.8 3 2 0 3 3 3 2 IPT/TIG domain Qn_am_d_aIII PF09099.5 gi|154151627|ref|YP_001405245.1| - 0.0026 18.0 0.7 1.4 9.2 0.3 2.7 2 0 0 2 2 2 2 Quinohemoprotein amine dehydrogenase, alpha subunit domain III CopC PF04234.7 gi|154151627|ref|YP_001405245.1| - 0.013 16.1 0.2 0.31 11.7 0.0 2.6 1 1 1 2 2 2 0 CopC domain A2M_N PF01835.14 gi|154151627|ref|YP_001405245.1| - 0.027 14.7 0.2 0.34 11.1 0.0 2.6 2 1 0 2 2 2 0 MG2 domain DUF3087 PF11286.3 gi|154151628|ref|YP_001405246.1| - 1.7 7.8 5.0 0.97 8.6 1.6 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3087) TPP_enzyme_C PF02775.16 gi|154151629|ref|YP_001405247.1| - 2.2e-30 105.2 0.0 3.2e-30 104.7 0.0 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFO_beta_C PF12367.3 gi|154151629|ref|YP_001405247.1| - 1.6e-09 37.5 0.1 2.7e-09 36.7 0.1 1.3 1 0 0 1 1 1 1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal XFP_N PF09364.5 gi|154151629|ref|YP_001405247.1| - 0.12 10.9 0.0 0.16 10.4 0.0 1.2 1 0 0 1 1 1 0 XFP N-terminal domain POR_N PF01855.14 gi|154151630|ref|YP_001405248.1| - 3.5e-48 164.1 0.0 5.2e-48 163.5 0.0 1.3 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg POR PF01558.13 gi|154151630|ref|YP_001405248.1| - 2.5e-30 105.6 0.1 4.1e-30 104.9 0.0 1.3 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase TPP_enzyme_N PF02776.13 gi|154151630|ref|YP_001405248.1| - 1.3e-05 24.7 0.2 3.1e-05 23.5 0.2 1.7 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Transketolase_C PF02780.15 gi|154151630|ref|YP_001405248.1| - 0.022 14.7 0.0 0.05 13.5 0.0 1.5 1 0 0 1 1 1 0 Transketolase, C-terminal domain Response_reg PF00072.19 gi|154151631|ref|YP_001405249.1| - 1.1e-17 64.0 0.0 1.2e-17 63.8 0.0 1.0 1 0 0 1 1 1 1 Response regulator receiver domain Methyltransf_31 PF13847.1 gi|154151631|ref|YP_001405249.1| - 0.097 12.2 0.0 0.097 12.2 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain DUF1894 PF08979.6 gi|154151632|ref|YP_001405250.1| - 7.5e-38 128.4 0.0 8.5e-38 128.2 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1894) DUF1890 PF09001.6 gi|154151633|ref|YP_001405251.1| - 9.4e-57 190.9 0.6 1.1e-56 190.7 0.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1890) CutA1 PF03091.10 gi|154151634|ref|YP_001405252.1| - 1.5e-30 104.8 0.1 1.7e-30 104.6 0.1 1.0 1 0 0 1 1 1 1 CutA1 divalent ion tolerance protein Aminotran_1_2 PF00155.16 gi|154151635|ref|YP_001405253.1| - 1.4e-62 211.7 0.0 1.6e-62 211.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Orn_Arg_deC_N PF02784.11 gi|154151636|ref|YP_001405254.1| - 7e-57 192.4 0.0 1e-56 191.9 0.0 1.2 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Orn_DAP_Arg_deC PF00278.17 gi|154151636|ref|YP_001405254.1| - 2.2e-23 82.1 0.0 1e-22 80.0 0.0 1.9 2 0 0 2 2 2 1 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Ala_racemase_N PF01168.15 gi|154151636|ref|YP_001405254.1| - 9.6e-12 44.9 0.5 2.1e-11 43.8 0.3 1.4 1 1 0 1 1 1 1 Alanine racemase, N-terminal domain tRNA_anti-codon PF01336.20 gi|154151637|ref|YP_001405255.1| - 1.2e-12 47.4 0.1 0.00054 19.7 0.1 3.6 3 0 0 3 3 3 3 OB-fold nucleic acid binding domain T2SS-T3SS_pil_N PF13629.1 gi|154151637|ref|YP_001405255.1| - 3.8e-05 23.1 0.1 0.063 12.8 0.1 3.5 3 0 0 3 3 3 2 Pilus formation protein N terminal region Rad51 PF08423.6 gi|154151638|ref|YP_001405256.1| - 1.3e-83 279.8 0.0 1.7e-83 279.4 0.0 1.1 1 0 0 1 1 1 1 Rad51 HHH_5 PF14520.1 gi|154151638|ref|YP_001405256.1| - 1.1e-14 54.2 1.0 2.2e-14 53.3 0.7 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix domain AAA_25 PF13481.1 gi|154151638|ref|YP_001405256.1| - 6.3e-12 45.3 0.0 1.1e-11 44.4 0.0 1.4 1 1 0 1 1 1 1 AAA domain KaiC PF06745.8 gi|154151638|ref|YP_001405256.1| - 1.9e-10 40.2 0.0 3.1e-10 39.5 0.0 1.3 1 0 0 1 1 1 1 KaiC HHH PF00633.18 gi|154151638|ref|YP_001405256.1| - 3e-09 36.0 0.9 0.0011 18.4 0.0 2.6 2 0 0 2 2 2 2 Helix-hairpin-helix motif RecA PF00154.16 gi|154151638|ref|YP_001405256.1| - 1.7e-08 33.9 0.0 6e-08 32.1 0.0 1.7 1 1 0 1 1 1 1 recA bacterial DNA recombination protein HHH_2 PF12826.2 gi|154151638|ref|YP_001405256.1| - 9.4e-06 25.4 0.0 2.6e-05 24.0 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif IMS_HHH PF11798.3 gi|154151638|ref|YP_001405256.1| - 5.9e-05 22.8 0.0 0.00077 19.3 0.0 2.8 3 0 0 3 3 2 1 IMS family HHH motif Cdd1 PF11731.3 gi|154151638|ref|YP_001405256.1| - 0.00014 21.7 0.0 0.00035 20.4 0.0 1.7 1 0 0 1 1 1 1 Pathogenicity locus HHH_3 PF12836.2 gi|154151638|ref|YP_001405256.1| - 0.0019 18.1 0.1 0.03 14.2 0.0 2.4 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_8 PF14716.1 gi|154151638|ref|YP_001405256.1| - 0.0029 17.7 0.2 0.37 11.0 0.0 2.7 2 0 0 2 2 2 1 Helix-hairpin-helix domain CobU PF02283.11 gi|154151638|ref|YP_001405256.1| - 0.0033 16.8 0.0 0.11 11.9 0.0 2.2 2 0 0 2 2 2 1 Cobinamide kinase / cobinamide phosphate guanyltransferase DNA_pol_lambd_f PF10391.4 gi|154151638|ref|YP_001405256.1| - 0.0043 16.5 0.0 0.014 14.8 0.0 1.9 1 1 0 1 1 1 1 Fingers domain of DNA polymerase lambda AAA_22 PF13401.1 gi|154151638|ref|YP_001405256.1| - 0.0062 16.6 0.0 0.017 15.2 0.0 1.9 1 1 0 1 1 1 1 AAA domain Sec63 PF02889.11 gi|154151638|ref|YP_001405256.1| - 0.0071 15.6 0.0 0.01 15.0 0.0 1.2 1 0 0 1 1 1 1 Sec63 Brl domain DUF4332 PF14229.1 gi|154151638|ref|YP_001405256.1| - 0.028 14.3 0.0 0.077 12.9 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4332) Arch_ATPase PF01637.13 gi|154151638|ref|YP_001405256.1| - 0.071 12.7 0.0 0.13 11.8 0.0 1.6 2 0 0 2 2 2 0 Archaeal ATPase Coq4 PF05019.8 gi|154151638|ref|YP_001405256.1| - 0.081 11.8 0.1 0.2 10.5 0.0 1.6 2 0 0 2 2 2 0 Coenzyme Q (ubiquinone) biosynthesis protein Coq4 HhH-GPD PF00730.20 gi|154151638|ref|YP_001405256.1| - 0.13 12.5 0.0 0.2 11.9 0.0 1.4 1 0 0 1 1 1 0 HhH-GPD superfamily base excision DNA repair protein Hydrolase_3 PF08282.7 gi|154151639|ref|YP_001405257.1| - 5.4e-33 114.6 0.8 5.2e-20 72.0 0.0 2.1 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase Hydrolase PF00702.21 gi|154151639|ref|YP_001405257.1| - 3.8e-08 34.0 3.0 1.7e-05 25.3 0.1 3.1 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.2 gi|154151639|ref|YP_001405257.1| - 6.5e-07 29.6 1.7 1.5e-05 25.2 0.0 2.5 1 1 1 2 2 2 1 haloacid dehalogenase-like hydrolase S6PP PF05116.8 gi|154151639|ref|YP_001405257.1| - 8.3e-07 28.5 0.1 2.7e-06 26.8 0.0 1.8 1 1 0 1 1 1 1 Sucrose-6F-phosphate phosphohydrolase Trehalose_PPase PF02358.11 gi|154151639|ref|YP_001405257.1| - 1.6e-05 23.9 0.0 7.3e-05 21.7 0.0 1.8 1 1 0 1 1 1 1 Trehalose-phosphatase Hydrolase_6 PF13344.1 gi|154151639|ref|YP_001405257.1| - 0.0082 16.0 0.0 0.016 15.1 0.0 1.6 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase PRC PF05239.11 gi|154151640|ref|YP_001405258.1| - 9.7e-12 44.5 0.1 1.2e-11 44.3 0.1 1.0 1 0 0 1 1 1 1 PRC-barrel domain HrcA_DNA-bdg PF03444.10 gi|154151641|ref|YP_001405259.1| - 7e-36 121.5 0.2 1.5e-35 120.4 0.2 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CBS PF00571.23 gi|154151641|ref|YP_001405259.1| - 2.4e-30 104.0 1.4 1.3e-14 53.6 0.1 2.4 2 0 0 2 2 2 2 CBS domain Rrf2 PF02082.15 gi|154151641|ref|YP_001405259.1| - 5.7e-07 29.5 0.1 7.1e-06 26.0 0.0 2.4 2 0 0 2 2 2 1 Transcriptional regulator HTH_11 PF08279.7 gi|154151641|ref|YP_001405259.1| - 9.6e-07 28.3 0.0 1.8e-06 27.4 0.0 1.5 1 0 0 1 1 1 1 HTH domain BON PF04972.12 gi|154151641|ref|YP_001405259.1| - 0.12 12.1 0.0 5 6.9 0.0 2.5 2 0 0 2 2 2 0 BON domain NOG1 PF06858.9 gi|154151642|ref|YP_001405260.1| - 1.1e-19 70.0 0.0 2.3e-19 69.0 0.0 1.6 1 0 0 1 1 1 1 Nucleolar GTP-binding protein 1 (NOG1) MMR_HSR1 PF01926.18 gi|154151642|ref|YP_001405260.1| - 2.3e-17 63.0 0.0 4.6e-17 62.0 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.13 gi|154151642|ref|YP_001405260.1| - 3.5e-08 32.8 0.0 5.3e-08 32.2 0.0 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B Miro PF08477.8 gi|154151642|ref|YP_001405260.1| - 8.8e-08 32.6 0.0 3.4e-07 30.7 0.0 2.0 3 0 0 3 3 3 1 Miro-like protein Dynamin_N PF00350.18 gi|154151642|ref|YP_001405260.1| - 0.0037 17.1 0.1 0.23 11.2 0.0 2.4 1 1 1 2 2 2 1 Dynamin family DUF258 PF03193.11 gi|154151642|ref|YP_001405260.1| - 0.064 12.4 0.0 0.17 11.0 0.0 1.7 1 1 0 1 1 1 0 Protein of unknown function, DUF258 Arf PF00025.16 gi|154151642|ref|YP_001405260.1| - 0.12 11.6 0.0 0.48 9.6 0.0 1.9 2 0 0 2 2 2 0 ADP-ribosylation factor family DUF1119 PF06550.6 gi|154151643|ref|YP_001405261.1| - 4.9e-82 275.2 30.6 1.3e-71 240.9 10.9 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF1119) Nbl1_Borealin_N PF10444.4 gi|154151644|ref|YP_001405262.1| - 0.0061 15.9 1.0 0.25 10.7 0.6 2.2 1 1 1 2 2 2 2 Nbl1 / Borealin N terminal DUF948 PF06103.6 gi|154151644|ref|YP_001405262.1| - 0.0085 15.9 0.3 0.013 15.2 0.2 1.3 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF948) IncA PF04156.9 gi|154151644|ref|YP_001405262.1| - 0.029 13.9 0.1 0.033 13.7 0.1 1.1 1 0 0 1 1 1 0 IncA protein Wzy_C PF04932.10 gi|154151644|ref|YP_001405262.1| - 0.049 13.4 0.3 0.052 13.3 0.2 1.1 1 0 0 1 1 1 0 O-Antigen ligase XPG_I PF00867.13 gi|154151645|ref|YP_001405263.1| - 4.2e-25 87.6 0.0 6.9e-25 86.9 0.0 1.4 1 0 0 1 1 1 1 XPG I-region XPG_N PF00752.12 gi|154151645|ref|YP_001405263.1| - 4.6e-18 65.3 0.0 6.8e-18 64.7 0.0 1.3 1 0 0 1 1 1 1 XPG N-terminal domain 5_3_exonuc_N PF02739.11 gi|154151645|ref|YP_001405263.1| - 0.0049 16.2 0.0 0.17 11.2 0.0 2.2 1 1 0 1 1 1 1 5'-3' exonuclease, N-terminal resolvase-like domain 5_3_exonuc PF01367.15 gi|154151645|ref|YP_001405263.1| - 0.1 12.8 0.0 0.23 11.7 0.0 1.6 1 0 0 1 1 1 0 5'-3' exonuclease, C-terminal SAM fold PAS_9 PF13426.1 gi|154151646|ref|YP_001405264.1| - 1.3e-18 67.3 0.1 1.1e-08 35.3 0.0 2.8 2 1 0 2 2 2 2 PAS domain Response_reg PF00072.19 gi|154151646|ref|YP_001405264.1| - 1e-17 64.1 0.0 2.6e-17 62.8 0.0 1.7 1 0 0 1 1 1 1 Response regulator receiver domain PAS PF00989.19 gi|154151646|ref|YP_001405264.1| - 1.8e-15 56.7 0.0 2.6e-06 27.1 0.0 2.8 2 0 0 2 2 2 2 PAS fold PAS_8 PF13188.1 gi|154151646|ref|YP_001405264.1| - 8.2e-15 54.0 0.0 3.4e-06 26.7 0.0 2.6 2 0 0 2 2 2 2 PAS domain PAS_4 PF08448.5 gi|154151646|ref|YP_001405264.1| - 6.2e-14 51.9 0.2 1.7e-08 34.4 0.0 3.1 3 0 0 3 3 3 2 PAS fold HATPase_c PF02518.21 gi|154151646|ref|YP_001405264.1| - 1.7e-11 43.7 0.4 4.4e-11 42.4 0.3 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_2 PF13581.1 gi|154151646|ref|YP_001405264.1| - 0.012 15.3 0.0 0.037 13.8 0.0 1.7 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain PPAK PF02818.10 gi|154151646|ref|YP_001405264.1| - 0.034 14.0 4.3 4.2 7.3 1.2 2.6 2 0 0 2 2 2 0 PPAK motif ST7 PF04184.7 gi|154151646|ref|YP_001405264.1| - 0.15 10.2 0.1 1.7 6.7 0.0 2.1 2 0 0 2 2 2 0 ST7 protein Inhibitor_I42 PF09394.5 gi|154151647|ref|YP_001405265.1| - 6.1e-25 87.3 0.2 9.6e-25 86.7 0.1 1.3 1 0 0 1 1 1 1 Chagasin family peptidase inhibitor I42 DUF1888 PF08985.6 gi|154151647|ref|YP_001405265.1| - 0.03 14.0 0.5 0.8 9.4 0.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF1888) Late_protein_L2 PF00513.13 gi|154151647|ref|YP_001405265.1| - 0.041 12.7 6.2 0.05 12.4 4.3 1.0 1 0 0 1 1 1 0 Late Protein L2 Cation_efflux PF01545.16 gi|154151648|ref|YP_001405266.1| - 1.5e-36 125.9 3.8 1.8e-36 125.6 2.6 1.0 1 0 0 1 1 1 1 Cation efflux family Fumarate_red_D PF02313.12 gi|154151648|ref|YP_001405266.1| - 0.03 14.2 0.7 0.18 11.6 0.1 2.3 2 0 0 2 2 2 0 Fumarate reductase subunit D DUF202 PF02656.10 gi|154151648|ref|YP_001405266.1| - 8.2 6.7 10.9 86 3.4 0.6 3.6 1 1 2 3 3 3 0 Domain of unknown function (DUF202) PAS PF00989.19 gi|154151649|ref|YP_001405267.1| - 6.6e-41 138.6 0.0 2.3e-15 56.3 0.0 3.8 4 0 0 4 4 4 3 PAS fold PAS_9 PF13426.1 gi|154151649|ref|YP_001405267.1| - 2.6e-37 127.3 0.0 3.3e-15 56.3 0.0 4.3 5 0 0 5 5 5 3 PAS domain PAS_4 PF08448.5 gi|154151649|ref|YP_001405267.1| - 2.3e-31 108.0 0.0 6.2e-13 48.7 0.0 3.7 3 0 0 3 3 3 3 PAS fold Response_reg PF00072.19 gi|154151649|ref|YP_001405267.1| - 1.1e-24 86.5 0.0 4.2e-24 84.7 0.0 2.0 2 0 0 2 2 2 1 Response regulator receiver domain PAS_8 PF13188.1 gi|154151649|ref|YP_001405267.1| - 7.6e-22 76.3 0.1 2.1e-08 33.7 0.0 3.7 3 0 0 3 3 3 3 PAS domain PAS_3 PF08447.6 gi|154151649|ref|YP_001405267.1| - 5.3e-19 68.1 0.0 3.9e-13 49.2 0.0 4.2 4 0 0 4 4 4 2 PAS fold PAS_7 PF12860.2 gi|154151649|ref|YP_001405267.1| - 5e-09 36.1 0.2 9.1e-05 22.4 0.0 4.2 3 2 0 3 3 3 2 PAS fold HATPase_c PF02518.21 gi|154151649|ref|YP_001405267.1| - 5.8e-09 35.6 0.0 1.3e-08 34.5 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_10 PF13596.1 gi|154151649|ref|YP_001405267.1| - 1.7e-08 34.6 0.0 7.7e-06 26.1 0.0 2.6 2 0 0 2 2 2 2 PAS domain PAS_11 PF14598.1 gi|154151649|ref|YP_001405267.1| - 5.2e-08 32.8 0.0 4.8e-06 26.4 0.0 3.2 3 0 0 3 3 3 1 PAS domain NMT1_2 PF13379.1 gi|154151650|ref|YP_001405268.1| - 1.8e-19 70.1 0.0 2.2e-19 69.8 0.0 1.1 1 0 0 1 1 1 1 NMT1-like family NMT1 PF09084.6 gi|154151650|ref|YP_001405268.1| - 2e-07 30.8 0.0 3.3e-07 30.1 0.0 1.3 1 1 0 1 1 1 1 NMT1/THI5 like SBP_bac_3 PF00497.15 gi|154151650|ref|YP_001405268.1| - 0.0044 16.3 0.0 0.039 13.1 0.0 1.9 2 0 0 2 2 2 1 Bacterial extracellular solute-binding proteins, family 3 STN PF07660.9 gi|154151650|ref|YP_001405268.1| - 0.014 14.9 0.1 0.05 13.1 0.0 2.0 2 0 0 2 2 2 0 Secretin and TonB N terminus short domain HTH_3 PF01381.17 gi|154151651|ref|YP_001405269.1| - 4.5e-10 39.2 0.1 7.3e-10 38.5 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.2 gi|154151651|ref|YP_001405269.1| - 1.7e-06 28.0 0.0 2.7e-06 27.3 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.1 gi|154151651|ref|YP_001405269.1| - 0.00023 21.2 0.0 0.00036 20.6 0.0 1.3 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_31 PF13560.1 gi|154151651|ref|YP_001405269.1| - 0.00033 20.8 0.0 0.00053 20.1 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_17 PF12728.2 gi|154151651|ref|YP_001405269.1| - 0.00091 19.4 0.0 0.0017 18.5 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain MerR PF00376.18 gi|154151651|ref|YP_001405269.1| - 0.0022 17.4 0.0 0.019 14.4 0.0 2.2 2 0 0 2 2 2 1 MerR family regulatory protein RHH_3 PF12651.2 gi|154151651|ref|YP_001405269.1| - 0.0034 17.0 0.1 1.5 8.6 0.1 2.8 2 1 0 2 2 2 1 Ribbon-helix-helix domain HTH_IclR PF09339.5 gi|154151651|ref|YP_001405269.1| - 0.0086 15.6 0.0 0.02 14.4 0.0 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain TrmB PF01978.14 gi|154151651|ref|YP_001405269.1| - 0.036 13.7 0.0 0.081 12.6 0.0 1.6 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.1 gi|154151651|ref|YP_001405269.1| - 0.047 13.0 0.0 0.13 11.6 0.0 1.7 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding TMP-TENI PF02581.12 gi|154151651|ref|YP_001405269.1| - 0.073 12.1 0.0 0.12 11.4 0.0 1.3 1 0 0 1 1 1 0 Thiamine monophosphate synthase/TENI HTH_7 PF02796.10 gi|154151651|ref|YP_001405269.1| - 0.076 12.8 0.1 0.18 11.6 0.0 1.6 2 0 0 2 2 1 0 Helix-turn-helix domain of resolvase HTH_5 PF01022.15 gi|154151651|ref|YP_001405269.1| - 0.092 12.4 0.0 0.21 11.3 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family ABC_tran PF00005.22 gi|154151652|ref|YP_001405270.1| - 3.3e-13 50.1 0.0 4.9e-13 49.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|154151652|ref|YP_001405270.1| - 1.4e-08 35.0 0.0 0.00021 21.3 0.0 2.1 2 0 0 2 2 2 2 AAA domain SMC_N PF02463.14 gi|154151652|ref|YP_001405270.1| - 0.00015 21.1 0.1 0.32 10.2 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.1 gi|154151652|ref|YP_001405270.1| - 0.0081 16.3 0.1 0.025 14.7 0.1 1.7 1 1 0 1 1 1 1 AAA domain Arch_ATPase PF01637.13 gi|154151652|ref|YP_001405270.1| - 0.01 15.5 0.0 0.021 14.5 0.0 1.6 1 1 0 1 1 1 0 Archaeal ATPase AAA_25 PF13481.1 gi|154151652|ref|YP_001405270.1| - 0.01 15.2 0.0 0.024 14.0 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.1 gi|154151652|ref|YP_001405270.1| - 0.011 15.2 0.0 0.023 14.2 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain MMR_HSR1 PF01926.18 gi|154151652|ref|YP_001405270.1| - 0.021 14.8 0.2 0.23 11.4 0.0 2.5 2 1 0 2 2 2 0 50S ribosome-binding GTPase AAA_16 PF13191.1 gi|154151652|ref|YP_001405270.1| - 0.025 14.5 0.1 0.042 13.8 0.1 1.6 1 1 0 1 1 1 0 AAA ATPase domain IIGP PF05049.8 gi|154151652|ref|YP_001405270.1| - 0.1 11.3 0.1 0.16 10.7 0.0 1.2 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) DUF258 PF03193.11 gi|154151652|ref|YP_001405270.1| - 0.12 11.5 0.0 0.19 10.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF258 AAA_10 PF12846.2 gi|154151652|ref|YP_001405270.1| - 0.12 11.8 0.0 0.28 10.5 0.0 1.6 2 0 0 2 2 2 0 AAA-like domain cobW PF02492.14 gi|154151653|ref|YP_001405271.1| - 1e-13 51.1 0.0 1.3e-13 50.7 0.0 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain Zeta_toxin PF06414.7 gi|154151653|ref|YP_001405271.1| - 0.00015 20.8 0.0 0.00021 20.4 0.0 1.3 1 0 0 1 1 1 1 Zeta toxin KTI12 PF08433.5 gi|154151653|ref|YP_001405271.1| - 0.00042 19.6 0.0 0.00066 18.9 0.0 1.3 1 0 0 1 1 1 1 Chromatin associated protein KTI12 ArgK PF03308.11 gi|154151653|ref|YP_001405271.1| - 0.00043 19.1 0.1 0.083 11.6 0.0 2.4 2 1 0 2 2 2 2 ArgK protein AAA_19 PF13245.1 gi|154151653|ref|YP_001405271.1| - 0.00097 18.8 0.1 0.0031 17.2 0.1 1.9 1 1 0 1 1 1 1 Part of AAA domain AAA_14 PF13173.1 gi|154151653|ref|YP_001405271.1| - 0.0016 18.3 0.0 0.0027 17.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain Arch_ATPase PF01637.13 gi|154151653|ref|YP_001405271.1| - 0.0077 15.9 0.0 0.013 15.2 0.0 1.4 1 0 0 1 1 1 1 Archaeal ATPase DnaB_C PF03796.10 gi|154151653|ref|YP_001405271.1| - 0.011 14.6 0.0 0.017 14.0 0.0 1.3 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain PduV-EutP PF10662.4 gi|154151653|ref|YP_001405271.1| - 0.012 15.0 0.0 3 7.3 0.0 2.2 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_16 PF13191.1 gi|154151653|ref|YP_001405271.1| - 0.019 14.9 0.0 0.042 13.8 0.0 1.6 2 0 0 2 2 2 0 AAA ATPase domain MobB PF03205.9 gi|154151653|ref|YP_001405271.1| - 0.024 14.3 0.1 0.049 13.3 0.0 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA PF00004.24 gi|154151653|ref|YP_001405271.1| - 0.025 14.8 0.0 0.042 14.0 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) MMR_HSR1 PF01926.18 gi|154151653|ref|YP_001405271.1| - 0.1 12.5 0.0 0.18 11.7 0.0 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_11 PF13086.1 gi|154151653|ref|YP_001405271.1| - 0.13 11.8 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.1 gi|154151653|ref|YP_001405271.1| - 0.14 12.2 0.0 0.29 11.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.1 gi|154151653|ref|YP_001405271.1| - 0.14 12.0 0.0 0.23 11.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain FeS PF04060.8 gi|154151654|ref|YP_001405272.1| - 1.7e-06 27.5 2.7 3.6e-06 26.4 1.9 1.5 1 0 0 1 1 1 1 Putative Fe-S cluster PALP PF00291.20 gi|154151655|ref|YP_001405273.1| - 2.2e-25 89.5 0.3 2.8e-25 89.2 0.2 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme TPP_enzyme_C PF02775.16 gi|154151656|ref|YP_001405274.1| - 2.3e-12 46.7 0.1 8e-12 44.9 0.0 1.9 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_N PF02776.13 gi|154151656|ref|YP_001405274.1| - 3.6e-11 42.8 0.0 1e-10 41.3 0.0 1.7 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DUF2099 PF09872.4 gi|154151657|ref|YP_001405275.1| - 1.1e-104 349.0 1.3 1.3e-104 348.8 0.9 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2099) NadA PF02445.11 gi|154151658|ref|YP_001405276.1| - 1.3e-123 411.5 0.0 1.5e-123 411.3 0.0 1.0 1 0 0 1 1 1 1 Quinolinate synthetase A protein ThiS PF02597.15 gi|154151659|ref|YP_001405277.1| - 5e-07 30.0 0.1 5.7e-07 29.8 0.1 1.1 1 0 0 1 1 1 1 ThiS family ATP_bind_3 PF01171.15 gi|154151660|ref|YP_001405278.1| - 4.1e-13 49.2 0.0 5.5e-13 48.8 0.0 1.2 1 0 0 1 1 1 1 PP-loop family tRNA_Me_trans PF03054.11 gi|154151660|ref|YP_001405278.1| - 4.7e-05 22.1 0.0 6.2e-05 21.7 0.0 1.1 1 0 0 1 1 1 1 tRNA methyl transferase NAD_synthase PF02540.12 gi|154151660|ref|YP_001405278.1| - 0.0024 16.8 0.0 0.0034 16.3 0.0 1.1 1 0 0 1 1 1 1 NAD synthase Asn_synthase PF00733.16 gi|154151660|ref|YP_001405278.1| - 0.0035 16.8 0.0 0.0054 16.2 0.0 1.3 1 0 0 1 1 1 1 Asparagine synthase QueC PF06508.8 gi|154151660|ref|YP_001405278.1| - 0.022 14.0 0.0 0.022 14.0 0.0 1.8 2 0 0 2 2 2 0 Queuosine biosynthesis protein QueC PAPS_reduct PF01507.14 gi|154151660|ref|YP_001405278.1| - 0.12 12.1 0.0 0.19 11.5 0.0 1.3 1 0 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family RecR PF02132.10 gi|154151660|ref|YP_001405278.1| - 3.3 7.2 12.7 0.62 9.5 2.0 3.3 3 0 0 3 3 3 0 RecR protein FdhD-NarQ PF02634.10 gi|154151661|ref|YP_001405279.1| - 5.3e-65 219.1 0.0 6.1e-65 218.9 0.0 1.0 1 0 0 1 1 1 1 FdhD/NarQ family DUF4260 PF14079.1 gi|154151661|ref|YP_001405279.1| - 0.0023 17.7 0.0 0.0046 16.7 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4260) NAD_synthase PF02540.12 gi|154151662|ref|YP_001405280.1| - 1.5e-07 30.5 0.0 2.6e-07 29.8 0.0 1.3 1 0 0 1 1 1 1 NAD synthase Asn_synthase PF00733.16 gi|154151662|ref|YP_001405280.1| - 1.9e-05 24.2 0.0 2.8e-05 23.7 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase ATP_bind_3 PF01171.15 gi|154151662|ref|YP_001405280.1| - 0.00021 20.8 0.0 0.0073 15.8 0.0 2.3 1 1 0 1 1 1 1 PP-loop family PAPS_reduct PF01507.14 gi|154151662|ref|YP_001405280.1| - 0.0086 15.9 0.0 0.012 15.4 0.0 1.2 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family tRNA_Me_trans PF03054.11 gi|154151662|ref|YP_001405280.1| - 0.019 13.5 0.0 0.15 10.5 0.0 2.0 2 0 0 2 2 2 0 tRNA methyl transferase QueC PF06508.8 gi|154151662|ref|YP_001405280.1| - 0.043 13.0 0.0 0.078 12.2 0.0 1.4 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC HTH_3 PF01381.17 gi|154151663|ref|YP_001405281.1| - 0.00014 21.5 0.1 0.0016 18.2 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix HTH_37 PF13744.1 gi|154151663|ref|YP_001405281.1| - 0.0035 17.1 0.0 0.0064 16.2 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.1 gi|154151663|ref|YP_001405281.1| - 0.0092 15.6 0.3 0.025 14.2 0.0 1.8 2 1 0 2 2 2 1 Homeodomain-like domain HTH_1 PF00126.22 gi|154151663|ref|YP_001405281.1| - 0.01 15.5 0.4 0.021 14.5 0.2 1.5 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family DUF1284 PF06935.6 gi|154151663|ref|YP_001405281.1| - 0.015 15.4 0.1 0.022 14.9 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1284) HTH_31 PF13560.1 gi|154151663|ref|YP_001405281.1| - 0.017 15.3 0.1 0.055 13.6 0.1 1.8 1 1 1 2 2 2 0 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.1 gi|154151663|ref|YP_001405281.1| - 0.035 13.2 0.0 0.066 12.3 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 HTH_19 PF12844.2 gi|154151663|ref|YP_001405281.1| - 0.039 13.9 0.0 0.69 10.0 0.0 2.1 1 1 0 2 2 2 0 Helix-turn-helix domain HTH_28 PF13518.1 gi|154151663|ref|YP_001405281.1| - 0.045 13.7 0.3 0.12 12.4 0.1 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain DSHCT PF08148.7 gi|154151663|ref|YP_001405281.1| - 0.097 11.9 0.1 0.14 11.3 0.0 1.3 1 1 0 1 1 1 0 DSHCT (NUC185) domain Aminotran_5 PF00266.14 gi|154151664|ref|YP_001405282.1| - 1.5e-90 303.6 0.0 1.9e-90 303.3 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.16 gi|154151664|ref|YP_001405282.1| - 8.4e-09 34.9 0.0 1.2e-08 34.5 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.12 gi|154151664|ref|YP_001405282.1| - 4.9e-07 29.1 0.1 7.5e-07 28.5 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Pyridoxal_deC PF00282.14 gi|154151664|ref|YP_001405282.1| - 0.00054 18.5 0.0 0.00078 17.9 0.0 1.2 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Cys_Met_Meta_PP PF01053.15 gi|154151664|ref|YP_001405282.1| - 0.039 12.2 0.1 0.052 11.8 0.1 1.1 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme NifU_N PF01592.11 gi|154151665|ref|YP_001405283.1| - 2.8e-50 169.5 0.0 3.2e-50 169.3 0.0 1.0 1 0 0 1 1 1 1 NifU-like N terminal domain Phos_pyr_kin PF08543.7 gi|154151665|ref|YP_001405283.1| - 0.11 11.6 0.0 0.14 11.2 0.0 1.2 1 0 0 1 1 1 0 Phosphomethylpyrimidine kinase ThiF PF00899.16 gi|154151666|ref|YP_001405284.1| - 5.6e-41 139.5 0.1 7.5e-41 139.1 0.1 1.2 1 0 0 1 1 1 1 ThiF family MoeZ_MoeB PF05237.8 gi|154151666|ref|YP_001405284.1| - 1.6e-22 78.8 0.2 2.8e-22 78.0 0.2 1.4 1 0 0 1 1 1 1 MoeZ/MoeB domain ThiS PF02597.15 gi|154151667|ref|YP_001405285.1| - 6.5e-14 52.1 0.1 7.8e-14 51.8 0.0 1.1 1 0 0 1 1 1 1 ThiS family Lambda_tail_I PF06805.7 gi|154151667|ref|YP_001405285.1| - 0.011 15.4 0.0 0.012 15.3 0.0 1.2 1 0 0 1 1 1 0 Bacteriophage lambda tail assembly protein I MoaE PF02391.12 gi|154151668|ref|YP_001405286.1| - 6.6e-27 93.6 1.8 7.5e-27 93.4 1.3 1.1 1 0 0 1 1 1 1 MoaE protein Mur_ligase PF01225.20 gi|154151668|ref|YP_001405286.1| - 0.059 13.4 0.2 5.3 7.1 0.0 2.2 2 0 0 2 2 2 0 Mur ligase family, catalytic domain DNA_RNApol_7kD PF03604.8 gi|154151669|ref|YP_001405287.1| - 2.7e-05 23.5 1.4 6.4e-05 22.3 0.9 1.6 1 0 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit OrfB_Zn_ribbon PF07282.6 gi|154151669|ref|YP_001405287.1| - 3.1e-05 23.5 1.8 4.4e-05 23.0 1.2 1.4 1 0 0 1 1 1 1 Putative transposase DNA-binding domain UPF0547 PF10571.4 gi|154151669|ref|YP_001405287.1| - 4.3e-05 23.1 2.9 4.3e-05 23.1 2.0 2.2 2 0 0 2 2 2 1 Uncharacterised protein family UPF0547 zinc_ribbon_2 PF13240.1 gi|154151669|ref|YP_001405287.1| - 0.00056 19.3 6.5 0.014 14.8 4.4 2.6 1 1 1 2 2 2 2 zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|154151669|ref|YP_001405287.1| - 0.0017 17.4 6.3 0.13 11.5 0.1 2.5 2 0 0 2 2 2 2 zinc-ribbon domain IBR PF01485.16 gi|154151669|ref|YP_001405287.1| - 0.004 16.9 1.7 0.004 16.9 1.2 2.1 2 0 0 2 2 2 1 IBR domain Ribosomal_S27e PF01667.12 gi|154151669|ref|YP_001405287.1| - 0.0043 16.5 2.9 0.0043 16.5 2.0 1.7 1 1 0 1 1 1 1 Ribosomal protein S27 DZR PF12773.2 gi|154151669|ref|YP_001405287.1| - 0.0047 16.7 4.1 0.0047 16.7 2.9 1.7 1 1 1 2 2 2 2 Double zinc ribbon zf-tcix PF14952.1 gi|154151669|ref|YP_001405287.1| - 0.0053 16.0 7.2 0.026 13.8 0.1 2.4 2 0 0 2 2 2 1 Putative treble-clef, zinc-finger, Zn-binding DNA_ligase_ZBD PF03119.11 gi|154151669|ref|YP_001405287.1| - 0.0077 15.9 0.9 0.0077 15.9 0.6 2.0 2 0 0 2 2 2 1 NAD-dependent DNA ligase C4 zinc finger domain PhnA_Zn_Ribbon PF08274.7 gi|154151669|ref|YP_001405287.1| - 0.0093 15.7 2.4 0.035 13.8 1.7 2.0 1 1 0 1 1 1 1 PhnA Zinc-Ribbon Fer4_3 PF12798.2 gi|154151669|ref|YP_001405287.1| - 0.016 15.7 2.6 1.2 9.8 0.0 3.3 3 1 0 3 3 3 0 4Fe-4S binding domain zinc_ribbon_5 PF13719.1 gi|154151669|ref|YP_001405287.1| - 0.018 14.5 5.2 0.26 10.8 3.6 2.4 1 1 0 1 1 1 0 zinc-ribbon domain zf-dskA_traR PF01258.12 gi|154151669|ref|YP_001405287.1| - 0.022 14.4 8.0 0.11 12.3 0.3 2.8 3 0 0 3 3 3 0 Prokaryotic dksA/traR C4-type zinc finger zinc_ribbon_4 PF13717.1 gi|154151669|ref|YP_001405287.1| - 0.026 14.2 5.1 0.46 10.2 3.6 2.4 1 1 0 1 1 1 0 zinc-ribbon domain zf-NADH-PPase PF09297.6 gi|154151669|ref|YP_001405287.1| - 0.032 13.7 1.0 0.14 11.6 0.7 2.1 1 1 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain YhfH PF14149.1 gi|154151669|ref|YP_001405287.1| - 0.041 13.6 13.6 0.12 12.1 0.9 3.3 2 1 1 3 3 3 0 YhfH-like protein TF_Zn_Ribbon PF08271.7 gi|154151669|ref|YP_001405287.1| - 0.046 13.0 3.5 0.51 9.7 0.2 2.4 1 1 0 1 1 1 0 TFIIB zinc-binding A2L_zn_ribbon PF08792.5 gi|154151669|ref|YP_001405287.1| - 0.059 12.8 1.6 0.059 12.8 1.1 1.8 2 0 0 2 2 1 0 A2L zinc ribbon domain Nudix_N_2 PF14803.1 gi|154151669|ref|YP_001405287.1| - 0.061 13.0 2.8 1.1 9.0 0.1 2.9 3 0 0 3 3 3 0 Nudix N-terminal zf-C2H2_3 PF13878.1 gi|154151669|ref|YP_001405287.1| - 0.1 12.2 0.6 3.2 7.3 0.0 2.3 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO CpXC PF14353.1 gi|154151669|ref|YP_001405287.1| - 0.17 11.8 4.8 1.8 8.5 0.1 2.2 1 1 1 2 2 2 0 CpXC protein zinc-ribbons_6 PF07191.7 gi|154151669|ref|YP_001405287.1| - 0.22 11.3 5.5 0.39 10.5 3.8 1.5 1 1 0 1 1 1 0 zinc-ribbons zf-Mss51 PF13824.1 gi|154151669|ref|YP_001405287.1| - 0.27 11.1 3.8 0.5 10.2 2.6 1.8 1 1 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 Nop10p PF04135.7 gi|154151669|ref|YP_001405287.1| - 0.27 10.9 1.3 1.2 8.9 0.0 2.4 3 0 0 3 3 2 0 Nucleolar RNA-binding protein, Nop10p family Prok-RING_1 PF14446.1 gi|154151669|ref|YP_001405287.1| - 0.36 10.5 11.5 0.64 9.7 2.9 2.2 1 1 1 2 2 2 0 Prokaryotic RING finger family 1 Desulfoferrod_N PF06397.7 gi|154151669|ref|YP_001405287.1| - 0.39 10.1 0.1 0.39 10.1 0.1 2.6 2 1 1 3 3 3 0 Desulfoferrodoxin, N-terminal domain Lar_restr_allev PF14354.1 gi|154151669|ref|YP_001405287.1| - 0.51 10.6 9.7 2.4 8.5 6.7 2.3 1 1 0 1 1 1 0 Restriction alleviation protein Lar zf-C4_Topoisom PF01396.14 gi|154151669|ref|YP_001405287.1| - 0.52 9.8 6.4 0.89 9.1 0.4 2.8 3 0 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger DUF1610 PF07754.6 gi|154151669|ref|YP_001405287.1| - 0.64 10.1 7.2 5.4 7.2 1.5 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) HypA PF01155.14 gi|154151669|ref|YP_001405287.1| - 0.89 9.2 5.9 1.1 8.9 3.7 1.7 1 1 0 1 1 1 0 Hydrogenase expression/synthesis hypA family Mu-like_Com PF10122.4 gi|154151669|ref|YP_001405287.1| - 1 8.4 3.7 4.9 6.2 0.1 2.3 1 1 1 2 2 2 0 Mu-like prophage protein Com Zn-ribbon_8 PF09723.5 gi|154151669|ref|YP_001405287.1| - 1.1 9.2 10.1 1.3 9.0 3.6 2.7 1 1 2 3 3 3 0 Zinc ribbon domain DUF1451 PF07295.6 gi|154151669|ref|YP_001405287.1| - 2.6 7.8 6.1 0.16 11.7 0.8 1.6 1 1 2 3 3 3 0 Protein of unknown function (DUF1451) DUF329 PF03884.9 gi|154151669|ref|YP_001405287.1| - 2.7 7.5 7.1 14 5.3 3.6 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF329) Zn_Tnp_IS1595 PF12760.2 gi|154151669|ref|YP_001405287.1| - 4.5 7.1 8.7 0.92 9.3 1.7 2.3 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Rsm22 PF09243.5 gi|154151670|ref|YP_001405288.1| - 9.9e-08 31.3 0.0 1.4e-07 30.8 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial small ribosomal subunit Rsm22 Methyltransf_18 PF12847.2 gi|154151670|ref|YP_001405288.1| - 4.4e-07 30.4 0.0 8.5e-07 29.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|154151670|ref|YP_001405288.1| - 1.8e-06 27.6 0.0 3.3e-06 26.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|154151670|ref|YP_001405288.1| - 4.3e-06 26.5 0.0 6.8e-06 25.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain FeoA PF04023.9 gi|154151670|ref|YP_001405288.1| - 0.14 12.1 0.0 2.7 8.0 0.0 2.5 2 0 0 2 2 2 0 FeoA domain DUF1628 PF07790.6 gi|154151671|ref|YP_001405289.1| - 1.5e-15 57.6 3.7 1.5e-15 57.6 2.6 5.2 6 1 1 7 7 7 1 Protein of unknown function (DUF1628) Tol_Tol_Ttg2 PF05494.7 gi|154151671|ref|YP_001405289.1| - 0.0043 16.6 0.3 22 4.5 0.0 4.1 5 0 0 5 5 5 2 Toluene tolerance, Ttg2 DUF3244 PF11589.3 gi|154151671|ref|YP_001405289.1| - 0.013 15.1 0.8 0.091 12.4 0.0 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF3244) DUF1628 PF07790.6 gi|154151672|ref|YP_001405290.1| - 0.3 11.8 0.1 0.3 11.8 0.1 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF1628) CDP-OH_P_transf PF01066.16 gi|154151674|ref|YP_001405292.1| - 2.3e-15 56.7 13.5 1.3e-14 54.3 9.4 2.0 1 1 0 1 1 1 1 CDP-alcohol phosphatidyltransferase Cation_efflux PF01545.16 gi|154151674|ref|YP_001405292.1| - 0.041 12.9 5.1 0.026 13.5 2.3 1.6 1 1 0 1 1 1 0 Cation efflux family Amastin PF07344.6 gi|154151674|ref|YP_001405292.1| - 0.89 9.1 6.8 6.5 6.3 0.7 2.4 2 0 0 2 2 2 0 Amastin surface glycoprotein AAA_18 PF13238.1 gi|154151675|ref|YP_001405293.1| - 8.4e-18 64.9 0.0 1.2e-17 64.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.1 gi|154151675|ref|YP_001405293.1| - 3.1e-12 47.3 0.0 4.1e-12 46.9 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.1 gi|154151675|ref|YP_001405293.1| - 3e-06 27.1 0.8 0.0034 17.2 0.0 2.1 1 1 1 2 2 2 2 AAA domain AAA_28 PF13521.1 gi|154151675|ref|YP_001405293.1| - 4e-06 26.8 0.1 2e-05 24.5 0.0 1.9 2 0 0 2 2 2 1 AAA domain ArgK PF03308.11 gi|154151675|ref|YP_001405293.1| - 0.00076 18.3 0.1 0.0029 16.4 0.0 1.8 2 0 0 2 2 2 1 ArgK protein AAA_22 PF13401.1 gi|154151675|ref|YP_001405293.1| - 0.0024 18.0 0.0 0.004 17.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain UPF0180 PF03698.8 gi|154151675|ref|YP_001405293.1| - 0.0061 16.3 0.0 0.19 11.5 0.0 2.3 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0180) Hpr_kinase_C PF07475.7 gi|154151675|ref|YP_001405293.1| - 0.0061 15.8 0.0 0.0099 15.2 0.0 1.3 1 0 0 1 1 1 1 HPr Serine kinase C-terminal domain CoaE PF01121.15 gi|154151675|ref|YP_001405293.1| - 0.01 15.2 0.0 0.017 14.4 0.0 1.5 1 0 0 1 1 1 0 Dephospho-CoA kinase AAA PF00004.24 gi|154151675|ref|YP_001405293.1| - 0.032 14.4 0.0 0.066 13.4 0.0 1.5 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_19 PF13245.1 gi|154151675|ref|YP_001405293.1| - 0.035 13.8 0.4 0.085 12.6 0.2 1.6 1 0 0 1 1 1 0 Part of AAA domain Viral_helicase1 PF01443.13 gi|154151675|ref|YP_001405293.1| - 0.051 13.0 0.0 0.067 12.7 0.0 1.2 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase KTI12 PF08433.5 gi|154151675|ref|YP_001405293.1| - 0.055 12.6 0.0 0.073 12.2 0.0 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 RNA_helicase PF00910.17 gi|154151675|ref|YP_001405293.1| - 0.081 13.1 0.0 0.16 12.1 0.0 1.5 1 0 0 1 1 1 0 RNA helicase NTPase_1 PF03266.10 gi|154151675|ref|YP_001405293.1| - 0.12 12.0 0.1 0.24 11.0 0.1 1.5 1 0 0 1 1 1 0 NTPase Aminotran_1_2 PF00155.16 gi|154151676|ref|YP_001405294.1| - 2.1e-45 155.2 0.0 2.4e-45 155.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.14 gi|154151676|ref|YP_001405294.1| - 0.00045 19.0 0.0 0.039 12.6 0.0 2.1 2 0 0 2 2 2 2 Aminotransferase class-V Alliinase_C PF04864.8 gi|154151676|ref|YP_001405294.1| - 0.0013 17.4 0.0 0.0054 15.4 0.0 2.0 3 0 0 3 3 3 1 Allinase Aminotran_3 PF00202.16 gi|154151677|ref|YP_001405295.1| - 5.1e-93 311.6 0.4 6.2e-93 311.3 0.3 1.1 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_5 PF00266.14 gi|154151677|ref|YP_001405295.1| - 0.00097 17.9 0.0 0.0016 17.2 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.15 gi|154151677|ref|YP_001405295.1| - 0.0015 16.9 0.0 0.0021 16.3 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme GMP_synt_C PF00958.17 gi|154151678|ref|YP_001405296.1| - 6.4e-28 96.3 0.0 1.5e-27 95.1 0.0 1.6 1 0 0 1 1 1 1 GMP synthase C terminal domain NAD_synthase PF02540.12 gi|154151678|ref|YP_001405296.1| - 3.9e-13 48.8 0.1 3.3e-08 32.7 0.0 2.1 2 0 0 2 2 2 2 NAD synthase tRNA_Me_trans PF03054.11 gi|154151678|ref|YP_001405296.1| - 6.6e-06 24.9 0.1 0.0014 17.2 0.0 2.2 2 0 0 2 2 2 2 tRNA methyl transferase Asn_synthase PF00733.16 gi|154151678|ref|YP_001405296.1| - 5.3e-05 22.8 0.1 9.2e-05 22.0 0.1 1.4 1 1 0 1 1 1 1 Asparagine synthase Arginosuc_synth PF00764.14 gi|154151678|ref|YP_001405296.1| - 8.5e-05 21.7 0.0 0.00018 20.7 0.0 1.5 1 0 0 1 1 1 1 Arginosuccinate synthase QueC PF06508.8 gi|154151678|ref|YP_001405296.1| - 0.003 16.8 0.0 0.012 14.8 0.0 1.8 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC ThiI PF02568.9 gi|154151678|ref|YP_001405296.1| - 0.0031 16.9 0.1 0.0086 15.5 0.1 1.7 1 1 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) PAPS_reduct PF01507.14 gi|154151678|ref|YP_001405296.1| - 0.0052 16.6 0.0 0.0081 15.9 0.0 1.3 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family CTP_synth_N PF06418.9 gi|154151679|ref|YP_001405297.1| - 4.4e-124 413.0 0.1 6.5e-124 412.4 0.1 1.2 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.23 gi|154151679|ref|YP_001405297.1| - 7.4e-51 172.3 0.0 1.2e-50 171.6 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase class-I CbiA PF01656.18 gi|154151679|ref|YP_001405297.1| - 1.8e-09 37.3 0.1 8.1e-09 35.1 0.1 2.0 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Peptidase_C26 PF07722.8 gi|154151679|ref|YP_001405297.1| - 1.1e-07 31.4 0.0 5e-07 29.3 0.0 2.1 2 1 0 2 2 2 1 Peptidase C26 TPR_11 PF13414.1 gi|154151680|ref|YP_001405298.1| - 6.7e-28 96.1 20.9 2.7e-13 49.3 0.6 3.8 1 1 4 5 5 5 4 TPR repeat TPR_2 PF07719.12 gi|154151680|ref|YP_001405298.1| - 8.6e-19 65.8 9.3 2.1e-05 24.0 0.0 5.2 5 1 1 6 6 5 3 Tetratricopeptide repeat TPR_1 PF00515.23 gi|154151680|ref|YP_001405298.1| - 5.6e-17 60.5 13.3 9.1e-07 28.2 0.3 5.8 7 0 0 7 7 7 3 Tetratricopeptide repeat TPR_14 PF13428.1 gi|154151680|ref|YP_001405298.1| - 1.9e-14 52.8 1.1 0.0011 19.3 0.0 4.7 2 2 3 5 5 5 3 Tetratricopeptide repeat TPR_16 PF13432.1 gi|154151680|ref|YP_001405298.1| - 5.6e-14 52.3 5.2 9.7e-06 26.1 0.0 3.8 3 1 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.1 gi|154151680|ref|YP_001405298.1| - 7.8e-12 44.0 8.7 0.0031 17.1 0.0 5.2 4 1 1 5 5 5 2 Tetratricopeptide repeat TPR_7 PF13176.1 gi|154151680|ref|YP_001405298.1| - 1.3e-11 43.3 1.7 8.1e-05 22.1 0.0 4.1 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_12 PF13424.1 gi|154151680|ref|YP_001405298.1| - 1.5e-11 44.0 8.8 9.6e-07 28.6 0.2 3.2 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.1 gi|154151680|ref|YP_001405298.1| - 2.3e-10 40.6 10.1 3.7e-07 30.3 0.4 3.2 1 1 1 3 3 3 2 Tetratricopeptide repeat TPR_17 PF13431.1 gi|154151680|ref|YP_001405298.1| - 6e-09 35.4 14.7 0.0016 18.5 0.2 5.3 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_6 PF13174.1 gi|154151680|ref|YP_001405298.1| - 1.7e-07 31.1 7.0 0.031 14.7 0.0 4.7 4 1 0 4 4 4 2 Tetratricopeptide repeat BTAD PF03704.12 gi|154151680|ref|YP_001405298.1| - 6.3e-07 29.7 0.0 7.6e-05 23.0 0.0 2.7 1 1 1 2 2 2 1 Bacterial transcriptional activator domain TPR_9 PF13371.1 gi|154151680|ref|YP_001405298.1| - 6.7e-07 29.0 0.0 0.1 12.4 0.0 3.5 2 1 1 3 3 2 2 Tetratricopeptide repeat Apc3 PF12895.2 gi|154151680|ref|YP_001405298.1| - 2.2e-06 27.7 3.8 4e-05 23.6 0.1 2.5 1 1 1 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 Fis1_TPR_C PF14853.1 gi|154151680|ref|YP_001405298.1| - 0.00058 19.6 1.7 1.3 8.9 0.1 3.4 3 0 0 3 3 3 1 Fis1 C-terminal tetratricopeptide repeat YfiO PF13525.1 gi|154151680|ref|YP_001405298.1| - 0.00086 18.8 3.7 0.0028 17.1 0.1 2.8 2 1 1 3 3 3 1 Outer membrane lipoprotein TPR_21 PF09976.4 gi|154151680|ref|YP_001405298.1| - 0.00098 19.0 8.1 0.031 14.2 0.8 3.4 2 1 1 3 3 3 1 Tetratricopeptide repeat NARP1 PF12569.3 gi|154151680|ref|YP_001405298.1| - 0.0015 17.3 1.1 0.27 9.9 0.1 2.1 1 1 1 2 2 2 2 NMDA receptor-regulated protein 1 DUF4366 PF14283.1 gi|154151680|ref|YP_001405298.1| - 0.0016 17.8 0.2 0.0016 17.8 0.2 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF4366) MIT PF04212.13 gi|154151680|ref|YP_001405298.1| - 0.0072 16.1 11.1 4.8 7.1 0.0 4.5 4 1 1 5 5 5 1 MIT (microtubule interacting and transport) domain TPR_5 PF12688.2 gi|154151680|ref|YP_001405298.1| - 0.0077 16.2 1.8 0.019 15.0 0.2 2.2 1 1 1 2 2 2 1 Tetratrico peptide repeat Sigma_reg_N PF13800.1 gi|154151680|ref|YP_001405298.1| - 0.018 15.0 0.0 9.5 6.3 0.0 2.3 2 0 0 2 2 2 0 Sigma factor regulator N-terminal Coatomer_E PF04733.9 gi|154151680|ref|YP_001405298.1| - 0.019 14.1 1.0 0.056 12.6 0.3 2.0 1 1 1 2 2 2 0 Coatomer epsilon subunit TPR_15 PF13429.1 gi|154151680|ref|YP_001405298.1| - 0.034 13.1 1.7 0.17 10.8 1.0 2.0 1 1 1 2 2 2 0 Tetratricopeptide repeat DUF3856 PF12968.2 gi|154151680|ref|YP_001405298.1| - 0.054 13.3 1.5 15 5.4 0.1 3.0 1 1 1 2 2 2 0 Domain of Unknown Function (DUF3856) PilP PF04351.8 gi|154151680|ref|YP_001405298.1| - 0.1 12.5 0.0 0.24 11.2 0.0 1.6 1 0 0 1 1 1 0 Pilus assembly protein, PilP Rifin_STEVOR PF02009.11 gi|154151680|ref|YP_001405298.1| - 0.21 11.2 2.1 0.34 10.5 1.2 1.7 1 1 0 1 1 1 0 Rifin/stevor family TPR_20 PF14561.1 gi|154151680|ref|YP_001405298.1| - 1.1 9.3 6.3 25 5.0 0.3 3.2 2 1 0 3 3 3 0 Tetratricopeptide repeat IncA PF04156.9 gi|154151680|ref|YP_001405298.1| - 1.4 8.4 3.4 2.2 7.8 0.0 2.1 2 0 0 2 2 2 0 IncA protein Tad PF13400.1 gi|154151680|ref|YP_001405298.1| - 2.4 8.2 5.5 14 5.8 0.1 2.7 2 0 0 2 2 2 0 Putative Flp pilus-assembly TadE/G-like 4HBT PF03061.17 gi|154151681|ref|YP_001405299.1| - 4.3e-12 45.9 0.0 6.7e-12 45.3 0.0 1.4 1 0 0 1 1 1 1 Thioesterase superfamily 4HBT_3 PF13622.1 gi|154151681|ref|YP_001405299.1| - 0.00085 19.1 0.0 0.0011 18.8 0.0 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily DUF4442 PF14539.1 gi|154151681|ref|YP_001405299.1| - 0.031 14.2 0.0 0.053 13.4 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4442) Glycos_transf_2 PF00535.21 gi|154151684|ref|YP_001405302.1| - 5.5e-18 65.2 0.0 6.7e-18 64.9 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|154151684|ref|YP_001405302.1| - 7.3e-09 35.7 0.0 1.1e-08 35.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 TPR_19 PF14559.1 gi|154151685|ref|YP_001405303.1| - 8.5e-10 38.8 10.0 0.028 14.7 0.0 7.3 3 2 7 10 10 10 5 Tetratricopeptide repeat TPR_14 PF13428.1 gi|154151685|ref|YP_001405303.1| - 8.4e-06 25.9 30.7 0.23 12.2 0.0 8.9 7 2 4 11 11 9 4 Tetratricopeptide repeat TPR_16 PF13432.1 gi|154151685|ref|YP_001405303.1| - 0.00015 22.3 34.6 0.0028 18.2 0.0 7.7 7 2 1 8 8 8 2 Tetratricopeptide repeat TPR_11 PF13414.1 gi|154151685|ref|YP_001405303.1| - 0.0002 20.9 0.0 0.0002 20.9 0.0 6.3 6 1 2 8 8 8 2 TPR repeat Apc3 PF12895.2 gi|154151685|ref|YP_001405303.1| - 0.00064 19.8 4.2 2.4 8.3 0.0 4.7 4 1 2 6 6 6 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_17 PF13431.1 gi|154151685|ref|YP_001405303.1| - 0.0026 17.8 5.8 20 5.7 0.1 5.9 7 0 0 7 7 6 0 Tetratricopeptide repeat TPR_2 PF07719.12 gi|154151685|ref|YP_001405303.1| - 0.0052 16.5 19.8 3.6 7.7 0.0 7.7 8 1 0 8 8 7 1 Tetratricopeptide repeat DUF2088 PF09861.4 gi|154151685|ref|YP_001405303.1| - 0.026 13.5 0.0 0.22 10.5 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF2088) DUF3366 PF11846.3 gi|154151685|ref|YP_001405303.1| - 0.042 13.7 2.7 5.1 6.9 0.7 3.2 3 1 0 3 3 3 0 Domain of unknown function (DUF3366) TPR_4 PF07721.9 gi|154151685|ref|YP_001405303.1| - 0.044 14.2 28.2 19 6.0 0.0 9.2 9 0 0 9 9 8 0 Tetratricopeptide repeat TPR_20 PF14561.1 gi|154151685|ref|YP_001405303.1| - 0.061 13.4 9.8 0.76 9.9 0.1 4.7 5 1 2 7 7 6 0 Tetratricopeptide repeat TPR_12 PF13424.1 gi|154151685|ref|YP_001405303.1| - 0.15 12.0 0.1 0.15 12.0 0.0 7.4 6 3 3 9 9 9 0 Tetratricopeptide repeat DUF2791 PF10923.3 gi|154151686|ref|YP_001405304.1| - 1.1e-139 465.6 0.0 1.4e-139 465.3 0.0 1.0 1 0 0 1 1 1 1 P-loop Domain of unknown function (DUF2791) AAA_16 PF13191.1 gi|154151686|ref|YP_001405304.1| - 4.8e-05 23.4 0.0 0.0002 21.3 0.0 2.0 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.1 gi|154151686|ref|YP_001405304.1| - 0.00035 20.6 0.0 0.12 12.4 0.0 2.4 2 0 0 2 2 2 2 AAA domain UPF0079 PF02367.12 gi|154151686|ref|YP_001405304.1| - 0.043 13.4 0.0 0.082 12.5 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised P-loop hydrolase UPF0079 NACHT PF05729.7 gi|154151686|ref|YP_001405304.1| - 0.14 11.8 0.0 0.39 10.3 0.0 1.8 2 0 0 2 2 2 0 NACHT domain Y_Y_Y PF07495.8 gi|154151687|ref|YP_001405305.1| - 0.0012 18.5 0.1 0.0027 17.4 0.1 1.6 1 1 0 1 1 1 1 Y_Y_Y domain DUF2271 PF10029.4 gi|154151687|ref|YP_001405305.1| - 0.044 13.2 0.0 0.064 12.7 0.0 1.2 1 0 0 1 1 1 0 Predicted periplasmic protein (DUF2271) Pertactin PF03212.9 gi|154151687|ref|YP_001405305.1| - 0.13 11.9 0.0 0.18 11.5 0.0 1.1 1 0 0 1 1 1 0 Pertactin Big_3_4 PF13754.1 gi|154151687|ref|YP_001405305.1| - 3.8 7.9 7.1 0.6 10.4 0.7 2.7 3 1 0 3 3 3 0 Bacterial Ig-like domain (group 3) Histidinol_dh PF00815.15 gi|154151688|ref|YP_001405306.1| - 1.8e-161 537.4 1.2 2e-161 537.2 0.8 1.0 1 0 0 1 1 1 1 Histidinol dehydrogenase Sulfate_transp PF00916.15 gi|154151689|ref|YP_001405307.1| - 3e-06 26.4 9.7 3e-06 26.4 6.7 2.7 1 1 1 2 2 2 1 Sulfate transporter family EVI2A PF05399.6 gi|154151689|ref|YP_001405307.1| - 0.2 10.8 1.1 0.37 10.0 0.7 1.3 1 0 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) Myc_target_1 PF15179.1 gi|154151689|ref|YP_001405307.1| - 1.6 8.2 3.5 0.66 9.5 0.4 1.8 2 0 0 2 2 2 0 Myc target protein 1 Pox_I5 PF04713.7 gi|154151691|ref|YP_001405309.1| - 0.017 14.8 0.4 0.019 14.6 0.3 1.1 1 0 0 1 1 1 0 Poxvirus protein I5 COX14 PF14880.1 gi|154151691|ref|YP_001405309.1| - 0.088 12.4 0.1 0.11 12.0 0.1 1.2 1 0 0 1 1 1 0 Cytochrome oxidase c assembly Lactamase_B PF00753.22 gi|154151692|ref|YP_001405310.1| - 1.9e-17 63.5 0.4 3.1e-16 59.6 0.1 2.4 1 1 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.2 gi|154151692|ref|YP_001405310.1| - 1.9e-16 60.2 0.0 2.3e-16 59.9 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.1 gi|154151692|ref|YP_001405310.1| - 9.1e-06 25.4 0.0 1.5e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Response_reg PF00072.19 gi|154151693|ref|YP_001405311.1| - 1.6e-18 66.7 0.0 4.7e-12 45.8 0.0 2.3 2 0 0 2 2 2 2 Response regulator receiver domain FleQ PF06490.6 gi|154151693|ref|YP_001405311.1| - 8.4e-06 25.8 0.0 0.0019 18.2 0.0 2.5 2 0 0 2 2 2 2 Flagellar regulatory protein FleQ HisKA PF00512.20 gi|154151693|ref|YP_001405311.1| - 2.2e-05 24.3 1.0 6.7e-05 22.8 0.7 1.8 1 0 0 1 1 1 1 His Kinase A (phospho-acceptor) domain B12-binding PF02310.14 gi|154151693|ref|YP_001405311.1| - 0.014 15.2 0.1 3.3 7.5 0.0 3.0 3 0 0 3 3 3 0 B12 binding domain DNA_ligase_A_M PF01068.16 gi|154151695|ref|YP_001405313.1| - 1.3e-47 161.7 0.0 2.4e-47 160.9 0.0 1.4 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_N PF04675.9 gi|154151695|ref|YP_001405313.1| - 5.1e-43 146.9 0.0 2.8e-41 141.2 0.0 2.4 1 1 1 2 2 2 2 DNA ligase N terminus DNA_ligase_A_C PF04679.10 gi|154151695|ref|YP_001405313.1| - 2.1e-19 69.7 0.0 4.6e-19 68.6 0.0 1.6 1 0 0 1 1 1 1 ATP dependent DNA ligase C terminal region DNA_ligase_OB_2 PF14743.1 gi|154151695|ref|YP_001405313.1| - 0.012 15.2 0.1 0.064 12.9 0.0 2.2 1 1 0 1 1 1 0 DNA ligase OB-like domain DUF1937 PF09152.5 gi|154151695|ref|YP_001405313.1| - 0.023 15.2 0.1 0.05 14.1 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1937) DUF650 PF04894.7 gi|154151696|ref|YP_001405314.1| - 8e-70 235.4 0.0 1.1e-69 235.0 0.0 1.2 1 0 0 1 1 1 1 Archaeal protein of unknown function (DUF650) DUF651 PF04895.7 gi|154151696|ref|YP_001405314.1| - 3.3e-31 107.1 0.0 5.8e-31 106.3 0.0 1.3 1 0 0 1 1 1 1 Archaeal protein of unknown function (DUF651) zf-ribbon_3 PF13248.1 gi|154151697|ref|YP_001405315.1| - 7.2e-05 21.8 0.8 0.17 11.1 0.0 2.3 2 0 0 2 2 2 2 zinc-ribbon domain PhnA_Zn_Ribbon PF08274.7 gi|154151697|ref|YP_001405315.1| - 0.00012 21.7 0.6 0.51 10.1 0.0 2.2 2 0 0 2 2 2 2 PhnA Zinc-Ribbon UPF0547 PF10571.4 gi|154151697|ref|YP_001405315.1| - 0.00024 20.7 1.6 0.54 10.0 0.2 2.3 2 0 0 2 2 2 2 Uncharacterised protein family UPF0547 Lar_restr_allev PF14354.1 gi|154151697|ref|YP_001405315.1| - 0.00032 20.9 0.1 0.00047 20.4 0.0 1.2 1 0 0 1 1 1 1 Restriction alleviation protein Lar Prok-RING_1 PF14446.1 gi|154151697|ref|YP_001405315.1| - 0.00037 20.1 0.3 0.44 10.3 0.0 2.2 2 0 0 2 2 2 2 Prokaryotic RING finger family 1 zinc_ribbon_2 PF13240.1 gi|154151697|ref|YP_001405315.1| - 0.001 18.4 0.3 0.82 9.2 0.0 2.2 2 0 0 2 2 2 2 zinc-ribbon domain zf-RING_3 PF14369.1 gi|154151697|ref|YP_001405315.1| - 0.0012 18.8 0.1 0.93 9.5 0.0 2.4 2 0 0 2 2 2 2 zinc-finger Zn-ribbon_8 PF09723.5 gi|154151697|ref|YP_001405315.1| - 0.0016 18.3 0.1 1.2 9.1 0.0 2.4 2 0 0 2 2 2 1 Zinc ribbon domain zinc_ribbon_5 PF13719.1 gi|154151697|ref|YP_001405315.1| - 0.0034 16.9 0.3 1.7 8.2 0.0 2.2 2 0 0 2 2 2 1 zinc-ribbon domain DZR PF12773.2 gi|154151697|ref|YP_001405315.1| - 0.0035 17.1 0.2 0.049 13.4 0.2 2.1 1 1 1 2 2 2 1 Double zinc ribbon zf-C2H2_6 PF13912.1 gi|154151697|ref|YP_001405315.1| - 0.0037 17.1 0.7 0.76 9.7 0.0 2.3 2 0 0 2 2 2 1 C2H2-type zinc finger zinc_ribbon_4 PF13717.1 gi|154151697|ref|YP_001405315.1| - 0.0048 16.5 0.3 1.9 8.2 0.0 2.2 2 0 0 2 2 2 1 zinc-ribbon domain TF_Zn_Ribbon PF08271.7 gi|154151697|ref|YP_001405315.1| - 0.0087 15.3 0.3 1.4 8.2 0.0 2.3 2 0 0 2 2 2 1 TFIIB zinc-binding A2L_zn_ribbon PF08792.5 gi|154151697|ref|YP_001405315.1| - 0.01 15.2 0.9 1.3 8.5 0.0 2.2 2 0 0 2 2 2 0 A2L zinc ribbon domain Zn_Tnp_IS1595 PF12760.2 gi|154151697|ref|YP_001405315.1| - 0.022 14.5 2.3 1.8 8.3 0.1 2.2 1 1 1 2 2 2 0 Transposase zinc-ribbon domain DNA_RNApol_7kD PF03604.8 gi|154151697|ref|YP_001405315.1| - 0.022 14.2 0.6 3.4 7.2 0.1 2.3 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit CpXC PF14353.1 gi|154151697|ref|YP_001405315.1| - 0.023 14.6 0.1 3.6 7.5 0.0 2.1 1 1 0 2 2 2 0 CpXC protein OrfB_Zn_ribbon PF07282.6 gi|154151697|ref|YP_001405315.1| - 0.023 14.3 0.1 3.3 7.4 0.0 2.2 2 0 0 2 2 2 0 Putative transposase DNA-binding domain zf-C2H2_4 PF13894.1 gi|154151697|ref|YP_001405315.1| - 0.027 14.8 0.2 3.7 8.1 0.0 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger DUF164 PF02591.10 gi|154151697|ref|YP_001405315.1| - 0.038 13.8 0.2 8.9 6.2 0.0 2.2 2 0 0 2 2 2 0 Putative zinc ribbon domain Rubredoxin PF00301.15 gi|154151697|ref|YP_001405315.1| - 0.041 13.7 1.7 5.1 7.0 0.1 2.4 2 0 0 2 2 2 0 Rubredoxin zf-tcix PF14952.1 gi|154151697|ref|YP_001405315.1| - 0.045 13.0 0.3 2.4 7.5 0.0 2.1 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding zf-H2C2_2 PF13465.1 gi|154151697|ref|YP_001405315.1| - 0.05 13.9 0.6 11 6.4 0.1 2.3 2 0 0 2 2 2 0 Zinc-finger double domain zf-NADH-PPase PF09297.6 gi|154151697|ref|YP_001405315.1| - 0.055 12.9 1.8 6.5 6.3 0.2 2.3 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain Nudix_N_2 PF14803.1 gi|154151697|ref|YP_001405315.1| - 0.056 13.1 0.4 8.4 6.1 0.0 2.3 2 0 0 2 2 2 0 Nudix N-terminal DUF1610 PF07754.6 gi|154151697|ref|YP_001405315.1| - 0.061 13.4 2.6 3.6 7.7 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) zf-ISL3 PF14690.1 gi|154151697|ref|YP_001405315.1| - 0.071 13.1 0.5 14 5.7 0.0 2.4 2 1 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 ADK_lid PF05191.9 gi|154151697|ref|YP_001405315.1| - 0.089 12.4 1.0 12 5.6 0.1 2.3 2 0 0 2 2 2 0 Adenylate kinase, active site lid zf-HYPF PF07503.7 gi|154151697|ref|YP_001405315.1| - 0.098 12.0 1.0 8.9 5.8 0.1 2.3 2 0 0 2 2 2 0 HypF finger FYDLN_acid PF09538.5 gi|154151697|ref|YP_001405315.1| - 0.11 13.1 0.1 5.8 7.5 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (FYDLN_acid) Ogr_Delta PF04606.7 gi|154151697|ref|YP_001405315.1| - 0.13 11.9 0.3 4.1 7.1 0.0 2.5 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger Zn_ribbon_recom PF13408.1 gi|154151697|ref|YP_001405315.1| - 0.13 12.4 0.2 8.1 6.7 0.0 2.1 2 0 0 2 2 2 0 Recombinase zinc beta ribbon domain zf-C4_Topoisom PF01396.14 gi|154151697|ref|YP_001405315.1| - 0.23 10.9 1.0 8.6 5.9 0.0 2.2 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger DNA_ligase_ZBD PF03119.11 gi|154151697|ref|YP_001405315.1| - 0.87 9.3 4.3 5.7 6.7 0.2 2.3 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain Glyco_trans_1_3 PF13528.1 gi|154151698|ref|YP_001405316.1| - 9e-34 117.0 0.0 2.6e-33 115.5 0.0 1.6 1 1 0 1 1 1 1 Glycosyl transferase family 1 Glyco_tran_28_C PF04101.11 gi|154151698|ref|YP_001405316.1| - 6.5e-13 48.6 0.0 1.6e-12 47.4 0.0 1.6 2 0 0 2 2 2 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_4_4 PF13579.1 gi|154151698|ref|YP_001405316.1| - 1.6e-07 31.5 0.0 4.6e-07 30.1 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.1 gi|154151698|ref|YP_001405316.1| - 2.6e-05 24.0 0.0 8.3e-05 22.4 0.0 1.8 1 1 0 1 1 1 1 Glycosyl transferase 4-like Glyco_transf_4 PF13439.1 gi|154151698|ref|YP_001405316.1| - 6.2e-05 22.7 0.0 0.00023 20.9 0.0 1.8 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_4 PF13692.1 gi|154151698|ref|YP_001405316.1| - 0.0044 17.1 0.0 0.018 15.1 0.0 2.0 2 0 0 2 2 2 1 Glycosyl transferases group 1 UDPGT PF00201.13 gi|154151698|ref|YP_001405316.1| - 0.012 14.1 0.0 0.029 12.9 0.0 1.5 2 0 0 2 2 2 0 UDP-glucoronosyl and UDP-glucosyl transferase PMSR PF01625.16 gi|154151699|ref|YP_001405317.1| - 2.7e-61 206.0 0.0 3.2e-61 205.7 0.0 1.0 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase Laminin_G_3 PF13385.1 gi|154151700|ref|YP_001405318.1| - 4e-22 79.1 13.2 4e-22 79.1 9.1 1.9 2 1 0 2 2 2 1 Concanavalin A-like lectin/glucanases superfamily DUF1628 PF07790.6 gi|154151700|ref|YP_001405318.1| - 0.028 15.1 1.7 0.047 14.4 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1628) Sialidase PF02973.11 gi|154151700|ref|YP_001405318.1| - 0.043 12.7 3.4 1.2 8.0 0.2 2.4 2 0 0 2 2 2 0 Sialidase, N-terminal domain 7TMR-DISM_7TM PF07695.6 gi|154151701|ref|YP_001405319.1| - 0.004 16.8 3.6 0.0042 16.7 2.5 1.0 1 0 0 1 1 1 1 7TM diverse intracellular signalling O-antigen_lig PF13425.1 gi|154151701|ref|YP_001405319.1| - 0.0047 16.9 4.5 0.0057 16.6 3.1 1.1 1 0 0 1 1 1 1 O-antigen ligase like membrane protein Peptidase_M50B PF13398.1 gi|154151701|ref|YP_001405319.1| - 0.01 15.2 2.2 0.012 15.0 1.5 1.1 1 0 0 1 1 1 0 Peptidase M50B-like DUF2637 PF10935.3 gi|154151701|ref|YP_001405319.1| - 0.014 15.3 0.5 0.016 15.1 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2637) HupE_UreJ PF04955.7 gi|154151701|ref|YP_001405319.1| - 0.05 12.8 0.9 0.057 12.7 0.6 1.2 1 1 0 1 1 1 0 HupE / UreJ protein STE2 PF02116.10 gi|154151701|ref|YP_001405319.1| - 0.15 11.1 1.0 0.24 10.4 0.2 1.7 2 0 0 2 2 2 0 Fungal pheromone mating factor STE2 GPCR Cation_ATPase_C PF00689.16 gi|154151701|ref|YP_001405319.1| - 0.2 11.1 2.7 3.5 7.1 2.1 2.0 2 0 0 2 2 2 0 Cation transporting ATPase, C-terminus DUF347 PF03988.7 gi|154151701|ref|YP_001405319.1| - 1.2 9.0 5.2 3.7 7.4 0.0 2.6 1 1 2 3 3 3 0 Repeat of Unknown Function (DUF347) HXXEE PF13787.1 gi|154151701|ref|YP_001405319.1| - 4.3 7.7 7.4 1.1 9.6 2.6 1.6 1 1 0 2 2 2 0 Protein of unknown function with HXXEE motif DUF4131 PF13567.1 gi|154151701|ref|YP_001405319.1| - 4.7 6.5 10.9 2.6 7.4 4.6 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) DUF4389 PF14333.1 gi|154151702|ref|YP_001405320.1| - 1.4e-22 79.2 1.5 1.8e-22 78.8 1.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4389) FecCD PF01032.13 gi|154151702|ref|YP_001405320.1| - 0.0035 16.2 0.3 0.0046 15.8 0.2 1.1 1 0 0 1 1 1 1 FecCD transport family DUF4199 PF13858.1 gi|154151702|ref|YP_001405320.1| - 0.059 13.2 0.4 0.059 13.2 0.2 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4199) 2-Hacid_dh_C PF02826.14 gi|154151703|ref|YP_001405321.1| - 4.7e-67 224.5 0.1 7e-67 224.0 0.1 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.25 gi|154151703|ref|YP_001405321.1| - 1.2e-35 121.8 1.3 1.2e-35 121.8 0.9 1.7 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACT PF01842.20 gi|154151703|ref|YP_001405321.1| - 9.5e-11 40.9 0.0 4e-10 38.9 0.0 2.2 1 0 0 1 1 1 1 ACT domain IlvN PF07991.7 gi|154151703|ref|YP_001405321.1| - 1.8e-05 24.1 0.1 4.8e-05 22.7 0.1 1.7 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain NAD_binding_2 PF03446.10 gi|154151703|ref|YP_001405321.1| - 0.0023 17.7 3.1 0.0024 17.7 0.4 2.3 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase Gp_dh_N PF00044.19 gi|154151703|ref|YP_001405321.1| - 0.024 14.5 0.1 0.057 13.3 0.1 1.7 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PPDK_N PF01326.14 gi|154151704|ref|YP_001405322.1| - 4.3e-104 348.1 0.1 6.6e-104 347.4 0.1 1.2 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.13 gi|154151704|ref|YP_001405322.1| - 4.8e-78 262.0 0.0 8.1e-78 261.2 0.0 1.3 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.18 gi|154151704|ref|YP_001405322.1| - 4.5e-28 96.6 2.1 1.8e-27 94.6 1.4 2.1 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain Pyridoxal_deC PF00282.14 gi|154151705|ref|YP_001405323.1| - 4.9e-25 87.7 0.0 8.3e-25 87.0 0.0 1.4 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Aminotran_5 PF00266.14 gi|154151705|ref|YP_001405323.1| - 3.7e-10 39.0 0.0 1.5e-09 37.1 0.0 1.8 1 1 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.16 gi|154151705|ref|YP_001405323.1| - 1.2e-06 27.7 0.0 1.7e-06 27.2 0.0 1.4 1 1 0 1 1 1 1 Aminotransferase class I and II Pribosyltran PF00156.22 gi|154151706|ref|YP_001405324.1| - 1.4e-19 70.0 0.9 1.7e-19 69.7 0.6 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.1 gi|154151706|ref|YP_001405324.1| - 0.0037 16.5 0.1 0.0066 15.6 0.0 1.4 1 1 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.1 gi|154151706|ref|YP_001405324.1| - 0.031 13.5 0.0 0.044 13.0 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosyl transferase Diphthamide_syn PF01866.12 gi|154151707|ref|YP_001405325.1| - 4.5e-94 315.1 0.0 5.1e-94 314.9 0.0 1.0 1 0 0 1 1 1 1 Putative diphthamide synthesis protein MTS PF05175.9 gi|154151708|ref|YP_001405326.1| - 3e-17 62.5 0.0 4.1e-17 62.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_26 PF13659.1 gi|154151708|ref|YP_001405326.1| - 2.3e-16 59.8 0.2 3.8e-16 59.1 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.8 gi|154151708|ref|YP_001405326.1| - 1.5e-15 57.1 0.2 1.8e-15 56.8 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_31 PF13847.1 gi|154151708|ref|YP_001405326.1| - 2.4e-12 46.6 0.0 4e-12 45.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|154151708|ref|YP_001405326.1| - 6.7e-11 42.7 0.1 1e-10 42.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.13 gi|154151708|ref|YP_001405326.1| - 1e-10 41.5 0.1 1.4e-10 41.0 0.1 1.1 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_25 PF13649.1 gi|154151708|ref|YP_001405326.1| - 4.9e-08 33.2 0.0 8.7e-08 32.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.10 gi|154151708|ref|YP_001405326.1| - 2.2e-06 27.1 0.0 2.9e-06 26.7 0.0 1.1 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_12 PF08242.7 gi|154151708|ref|YP_001405326.1| - 3.6e-05 24.1 0.0 5.8e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|154151708|ref|YP_001405326.1| - 3.9e-05 24.0 0.0 8.2e-05 23.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|154151708|ref|YP_001405326.1| - 5e-05 23.0 0.0 6.5e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.5 gi|154151708|ref|YP_001405326.1| - 0.00016 21.3 0.0 0.00022 20.8 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase N6_Mtase PF02384.11 gi|154151708|ref|YP_001405326.1| - 0.00043 19.4 0.0 0.00055 19.1 0.0 1.2 1 0 0 1 1 1 1 N-6 DNA Methylase Met_10 PF02475.11 gi|154151708|ref|YP_001405326.1| - 0.00074 19.1 0.0 0.001 18.7 0.0 1.1 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_32 PF13679.1 gi|154151708|ref|YP_001405326.1| - 0.0026 17.4 0.0 0.0034 17.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain FmrO PF07091.6 gi|154151708|ref|YP_001405326.1| - 0.0037 16.2 0.1 0.0057 15.6 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA methyltransferase (FmrO) Methyltransf_16 PF10294.4 gi|154151708|ref|YP_001405326.1| - 0.0041 16.5 0.0 0.0056 16.1 0.0 1.2 1 0 0 1 1 1 1 Putative methyltransferase AviRa PF11599.3 gi|154151708|ref|YP_001405326.1| - 0.012 14.6 0.0 0.017 14.1 0.0 1.2 1 0 0 1 1 1 0 RRNA methyltransferase AviRa Ubie_methyltran PF01209.13 gi|154151708|ref|YP_001405326.1| - 0.051 12.6 0.0 0.097 11.7 0.0 1.4 2 0 0 2 2 2 0 ubiE/COQ5 methyltransferase family DUF43 PF01861.11 gi|154151708|ref|YP_001405326.1| - 0.079 11.9 0.0 0.1 11.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF43 IncA PF04156.9 gi|154151709|ref|YP_001405327.1| - 0.044 13.3 20.1 0.05 13.2 13.9 1.0 1 0 0 1 1 1 0 IncA protein Fst_toxin PF13955.1 gi|154151709|ref|YP_001405327.1| - 0.09 12.4 2.4 0.09 12.4 1.6 3.2 2 1 0 2 2 2 0 Toxin Fst, type I toxin-antitoxin system DUF3098 PF11297.3 gi|154151709|ref|YP_001405327.1| - 0.31 10.7 4.3 0.38 10.5 3.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3098) DUF973 PF06157.6 gi|154151709|ref|YP_001405327.1| - 1.3 7.9 14.5 1.4 7.8 10.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF973) DUF373 PF04123.8 gi|154151709|ref|YP_001405327.1| - 8.9 5.2 8.9 8.9 5.2 6.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF373) TylF PF05711.6 gi|154151710|ref|YP_001405328.1| - 3.2e-21 75.5 0.0 7.1e-21 74.4 0.0 1.5 1 1 0 1 1 1 1 Macrocin-O-methyltransferase (TylF) Methyltransf_24 PF13578.1 gi|154151710|ref|YP_001405328.1| - 5.5e-13 49.6 0.0 2.8e-12 47.4 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain RasGAP_C PF03836.10 gi|154151710|ref|YP_001405328.1| - 0.02 14.5 0.1 0.035 13.7 0.1 1.3 1 0 0 1 1 1 0 RasGAP C-terminus DUF2651 PF10852.3 gi|154151711|ref|YP_001405329.1| - 2.6 8.4 7.2 10 6.5 5.0 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF2651) MFS_1 PF07690.11 gi|154151713|ref|YP_001405331.1| - 3.4e-49 167.4 71.9 2.2e-44 151.6 29.4 1.9 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.2 gi|154151713|ref|YP_001405331.1| - 0.014 15.1 11.5 0.2 11.4 0.1 4.1 4 0 0 4 4 4 0 MFS_1 like family DUF2115 PF09888.4 gi|154151715|ref|YP_001405333.1| - 3.8e-57 192.9 0.0 4.5e-57 192.6 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2115) DUF4013 PF13197.1 gi|154151716|ref|YP_001405334.1| - 2.7e-29 101.6 35.5 2.7e-29 101.6 24.6 2.6 2 1 1 3 3 3 1 Protein of unknown function (DUF4013) DUF975 PF06161.6 gi|154151716|ref|YP_001405334.1| - 0.24 11.1 26.8 0.63 9.7 8.8 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF975) DUF1508 PF07411.7 gi|154151717|ref|YP_001405335.1| - 0.11 11.9 0.8 0.38 10.2 0.6 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF1508) PEGA PF08308.6 gi|154151718|ref|YP_001405336.1| - 6.8e-12 45.0 17.9 0.00053 19.7 1.0 3.4 3 0 0 3 3 3 3 PEGA domain SPOR PF05036.8 gi|154151718|ref|YP_001405336.1| - 0.025 14.7 0.6 6.6 6.9 0.1 2.5 2 0 0 2 2 2 0 Sporulation related domain DUF538 PF04398.7 gi|154151718|ref|YP_001405336.1| - 0.046 13.9 0.9 6.2 7.1 0.0 3.2 1 1 2 3 3 3 0 Protein of unknown function, DUF538 XdhC_CoxI PF02625.11 gi|154151718|ref|YP_001405336.1| - 0.056 13.0 0.6 60 3.3 0.0 3.4 3 0 0 3 3 3 0 XdhC and CoxI family CARDB PF07705.6 gi|154151718|ref|YP_001405336.1| - 0.075 13.0 12.3 1.7 8.7 0.3 3.3 3 0 0 3 3 3 0 CARDB Polyoma_coat PF00718.15 gi|154151718|ref|YP_001405336.1| - 0.13 11.1 4.9 1.6 7.6 0.7 2.2 1 1 1 2 2 2 0 Polyomavirus coat protein TrbC PF04956.8 gi|154151718|ref|YP_001405336.1| - 0.18 11.8 2.1 12 5.9 0.1 2.9 3 0 0 3 3 3 0 TrbC/VIRB2 family CytB6-F_Fe-S PF08802.5 gi|154151718|ref|YP_001405336.1| - 0.26 11.3 22.0 0.79 9.7 0.2 5.0 5 0 0 5 5 5 0 Cytochrome B6-F complex Fe-S subunit Peptidase_S66 PF02016.10 gi|154151718|ref|YP_001405336.1| - 0.4 9.5 3.8 6.6 5.5 0.1 2.8 3 0 0 3 3 3 0 LD-carboxypeptidase Glyco_hydro_18 PF00704.23 gi|154151719|ref|YP_001405337.1| - 3.1e-22 79.5 0.4 7.6e-16 58.4 0.1 2.1 1 1 1 2 2 2 2 Glycosyl hydrolases family 18 TGS PF02824.16 gi|154151719|ref|YP_001405337.1| - 0.052 13.3 0.0 0.12 12.1 0.0 1.6 1 0 0 1 1 1 0 TGS domain Antitoxin-MazE PF04014.13 gi|154151720|ref|YP_001405338.1| - 2.4e-06 27.1 0.5 3.3e-06 26.6 0.3 1.3 1 0 0 1 1 1 1 Antidote-toxin recognition MazE FMN_red PF03358.10 gi|154151721|ref|YP_001405339.1| - 1.1e-21 76.8 0.0 8.8e-12 44.7 0.0 2.3 2 0 0 2 2 2 2 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|154151721|ref|YP_001405339.1| - 6.4e-16 58.4 0.0 2.6e-12 46.6 0.0 2.3 2 0 0 2 2 2 2 Flavodoxin-like fold MASE2 PF05230.6 gi|154151722|ref|YP_001405340.1| - 0.036 14.0 2.2 0.1 12.5 0.3 2.5 1 1 1 2 2 2 0 MASE2 domain Tom7 PF08038.7 gi|154151722|ref|YP_001405340.1| - 0.085 12.3 0.2 0.19 11.2 0.2 1.5 1 0 0 1 1 1 0 TOM7 family IspA PF04279.10 gi|154151722|ref|YP_001405340.1| - 0.58 10.1 8.3 0.8 9.6 5.8 1.3 1 1 0 1 1 1 0 Intracellular septation protein A ScpA_ScpB PF02616.9 gi|154151723|ref|YP_001405341.1| - 1.2e-25 90.5 0.0 2.8e-25 89.3 0.0 1.6 1 1 0 1 1 1 1 ScpA/B protein SMC_N PF02463.14 gi|154151724|ref|YP_001405342.1| - 3.7e-60 202.9 0.0 8.4e-60 201.7 0.0 1.7 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SMC_hinge PF06470.8 gi|154151724|ref|YP_001405342.1| - 1.1e-29 102.7 0.0 3.9e-29 101.0 0.0 2.0 1 0 0 1 1 1 1 SMC proteins Flexible Hinge Domain AAA_21 PF13304.1 gi|154151724|ref|YP_001405342.1| - 1.4e-09 38.3 15.1 5.4e-05 23.2 3.6 3.3 2 2 0 2 2 2 2 AAA domain AAA_15 PF13175.1 gi|154151724|ref|YP_001405342.1| - 4.2e-09 35.9 13.3 4.2e-09 35.9 9.2 3.4 2 1 1 4 4 4 1 AAA ATPase domain AAA_29 PF13555.1 gi|154151724|ref|YP_001405342.1| - 1.8e-07 30.5 0.0 4.8e-07 29.1 0.0 1.8 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.1 gi|154151724|ref|YP_001405342.1| - 5.4e-07 30.1 41.9 5.4e-07 30.1 29.0 5.1 2 2 0 2 2 1 1 AAA domain Reo_sigmaC PF04582.7 gi|154151724|ref|YP_001405342.1| - 2.8e-05 23.4 21.4 0.0046 16.1 1.6 4.9 2 2 3 5 5 5 5 Reovirus sigma C capsid protein bZIP_1 PF00170.16 gi|154151724|ref|YP_001405342.1| - 0.0027 17.6 4.9 0.0027 17.6 3.4 9.2 9 1 1 10 10 9 1 bZIP transcription factor DUF3832 PF12909.2 gi|154151724|ref|YP_001405342.1| - 0.065 13.2 1.9 0.36 10.9 0.2 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3832) AAA_13 PF13166.1 gi|154151724|ref|YP_001405342.1| - 0.083 11.3 75.1 0.012 14.1 6.6 5.5 3 2 1 4 4 3 0 AAA domain PG_binding_4 PF12229.3 gi|154151724|ref|YP_001405342.1| - 0.28 11.4 7.4 0.99 9.6 0.2 3.6 3 0 0 3 3 3 0 Putative peptidoglycan binding domain DUF1395 PF07160.7 gi|154151725|ref|YP_001405343.1| - 0.0011 18.5 0.1 0.0014 18.1 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1395) Sec2p PF06428.6 gi|154151725|ref|YP_001405343.1| - 0.0021 17.8 6.1 0.0061 16.3 3.9 1.8 1 1 1 2 2 2 1 GDP/GTP exchange factor Sec2p NPV_P10 PF05531.7 gi|154151725|ref|YP_001405343.1| - 0.086 13.0 0.2 0.15 12.3 0.2 1.4 1 0 0 1 1 1 0 Nucleopolyhedrovirus P10 protein SlyX PF04102.7 gi|154151725|ref|YP_001405343.1| - 0.14 12.5 3.3 0.24 11.8 0.2 2.1 2 0 0 2 2 2 0 SlyX SHMT PF00464.14 gi|154151726|ref|YP_001405344.1| - 5e-162 538.8 0.8 5.9e-162 538.6 0.6 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase DegT_DnrJ_EryC1 PF01041.12 gi|154151726|ref|YP_001405344.1| - 0.012 14.6 1.5 0.033 13.2 1.1 1.6 1 1 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family THF_DHG_CYH_C PF02882.14 gi|154151727|ref|YP_001405345.1| - 1.4e-70 235.5 1.4 2.2e-70 234.9 1.0 1.3 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THF_DHG_CYH PF00763.18 gi|154151727|ref|YP_001405345.1| - 9.9e-36 122.3 0.0 1.6e-35 121.6 0.0 1.3 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NolX PF05819.6 gi|154151727|ref|YP_001405345.1| - 0.19 10.0 0.0 0.25 9.6 0.0 1.1 1 0 0 1 1 1 0 NolX protein Pterin_bind PF00809.17 gi|154151728|ref|YP_001405346.1| - 4.9e-34 117.5 0.0 7.5e-34 116.9 0.0 1.3 1 0 0 1 1 1 1 Pterin binding enzyme AP_endonuc_2 PF01261.19 gi|154151728|ref|YP_001405346.1| - 0.0052 16.0 0.0 0.02 14.2 0.0 1.8 1 1 0 1 1 1 1 Xylose isomerase-like TIM barrel Radical_SAM PF04055.16 gi|154151728|ref|YP_001405346.1| - 0.1 12.7 0.0 1.7 8.8 0.0 2.1 1 1 1 2 2 2 0 Radical SAM superfamily F420_ligase PF01996.11 gi|154151729|ref|YP_001405347.1| - 3.7e-68 229.0 0.1 4.2e-68 228.8 0.0 1.0 1 0 0 1 1 1 1 F420-0:Gamma-glutamyl ligase DUF2393 PF09624.5 gi|154151730|ref|YP_001405348.1| - 0.11 12.0 2.7 0.68 9.4 1.9 2.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2393) Lipoprotein_19 PF13617.1 gi|154151730|ref|YP_001405348.1| - 0.27 10.8 0.8 0.95 9.1 0.2 1.9 2 0 0 2 2 2 0 YnbE-like lipoprotein Methyltransf_23 PF13489.1 gi|154151731|ref|YP_001405349.1| - 2.4e-10 40.3 0.0 4.9e-10 39.3 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|154151731|ref|YP_001405349.1| - 4.1e-09 36.9 0.0 7.1e-09 36.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|154151731|ref|YP_001405349.1| - 3.5e-06 27.4 0.0 1.1e-05 25.8 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|154151731|ref|YP_001405349.1| - 1.1e-05 25.7 0.0 2.6e-05 24.6 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|154151731|ref|YP_001405349.1| - 0.00011 22.4 0.0 0.00022 21.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|154151731|ref|YP_001405349.1| - 0.00027 20.9 0.0 0.00029 20.8 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|154151731|ref|YP_001405349.1| - 0.00036 20.1 0.0 0.00077 19.0 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase domain MTS PF05175.9 gi|154151731|ref|YP_001405349.1| - 0.00067 19.0 0.0 0.0011 18.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain TehB PF03848.9 gi|154151731|ref|YP_001405349.1| - 0.00074 18.7 0.0 0.001 18.2 0.0 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB Ubie_methyltran PF01209.13 gi|154151731|ref|YP_001405349.1| - 0.0012 18.0 0.0 0.0019 17.3 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family RrnaAD PF00398.15 gi|154151731|ref|YP_001405349.1| - 0.021 13.8 0.0 0.031 13.3 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase bPH_5 PF10882.3 gi|154151732|ref|YP_001405350.1| - 0.03 14.1 0.0 0.1 12.4 0.0 1.8 1 1 0 1 1 1 0 Bacterial PH domain VKOR PF07884.9 gi|154151734|ref|YP_001405352.1| - 0.058 13.2 5.6 0.078 12.8 3.9 1.2 1 0 0 1 1 1 0 Vitamin K epoxide reductase family YtpI PF14007.1 gi|154151734|ref|YP_001405352.1| - 3 7.8 5.7 2.4 8.1 0.6 2.0 1 1 1 2 2 2 0 YtpI-like protein Usp PF00582.21 gi|154151735|ref|YP_001405353.1| - 1.6e-34 119.0 0.1 1.8e-34 118.8 0.1 1.0 1 0 0 1 1 1 1 Universal stress protein family MFS_1 PF07690.11 gi|154151736|ref|YP_001405354.1| - 2.4e-40 138.3 67.7 5.4e-28 97.7 21.3 3.7 1 1 2 3 3 3 2 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|154151736|ref|YP_001405354.1| - 1.1e-07 30.8 28.0 3.3e-07 29.2 7.7 3.2 3 1 0 3 3 3 2 Sugar (and other) transporter MFS_3 PF05977.8 gi|154151736|ref|YP_001405354.1| - 0.00029 19.0 1.3 0.00029 19.0 0.9 2.3 2 0 0 2 2 2 1 Transmembrane secretion effector CofC PF01983.11 gi|154151737|ref|YP_001405355.1| - 6.9e-48 162.4 0.0 8.8e-48 162.1 0.0 1.0 1 0 0 1 1 1 1 Guanylyl transferase CofC like NTP_transf_3 PF12804.2 gi|154151737|ref|YP_001405355.1| - 4.3e-06 26.8 0.0 6.1e-06 26.4 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Cass2 PF14526.1 gi|154151738|ref|YP_001405356.1| - 1.8e-17 63.7 0.0 2.3e-17 63.3 0.0 1.1 1 0 0 1 1 1 1 Integron-associated effector binding protein GyrI-like PF06445.10 gi|154151738|ref|YP_001405356.1| - 2.6e-14 53.5 0.0 3e-14 53.3 0.0 1.0 1 0 0 1 1 1 1 GyrI-like small molecule binding domain HATPase_c PF02518.21 gi|154151739|ref|YP_001405357.1| - 4.6e-14 52.0 0.0 9.5e-14 51.0 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CTC1_2 PF15491.1 gi|154151739|ref|YP_001405357.1| - 0.0004 19.4 0.0 0.00057 18.9 0.0 1.2 1 0 0 1 1 1 1 CST, telomere maintenance, complex subunit CTC1 HATPase_c_3 PF13589.1 gi|154151739|ref|YP_001405357.1| - 0.0028 17.3 0.1 0.0071 16.0 0.0 1.6 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SPOB_a PF14689.1 gi|154151739|ref|YP_001405357.1| - 0.021 14.4 0.0 0.045 13.3 0.0 1.6 1 0 0 1 1 1 0 Sensor_kinase_SpoOB-type, alpha-helical domain HisKA PF00512.20 gi|154151739|ref|YP_001405357.1| - 0.024 14.6 0.4 0.08 12.9 0.0 2.1 3 0 0 3 3 3 0 His Kinase A (phospho-acceptor) domain Radical_SAM PF04055.16 gi|154151740|ref|YP_001405358.1| - 1.4e-09 38.3 0.1 2.3e-09 37.6 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily SAICAR_synt PF01259.13 gi|154151741|ref|YP_001405359.1| - 3.2e-59 200.0 0.1 3.8e-59 199.7 0.1 1.0 1 0 0 1 1 1 1 SAICAR synthetase S1FA PF04689.8 gi|154151741|ref|YP_001405359.1| - 0.93 9.4 3.8 2.7 7.9 2.6 1.8 1 0 0 1 1 1 0 DNA binding protein S1FA FeThRed_B PF02943.10 gi|154151742|ref|YP_001405360.1| - 1.2e-21 76.4 0.5 1.3e-21 76.3 0.3 1.0 1 0 0 1 1 1 1 Ferredoxin thioredoxin reductase catalytic beta chain UDG PF03167.14 gi|154151743|ref|YP_001405361.1| - 5.1e-07 29.2 0.0 6e-07 29.0 0.0 1.0 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily ABC1 PF03109.11 gi|154151744|ref|YP_001405362.1| - 1.1e-35 122.1 0.0 2.2e-35 121.1 0.0 1.4 1 0 0 1 1 1 1 ABC1 family APH PF01636.18 gi|154151744|ref|YP_001405362.1| - 0.00063 19.5 0.2 0.0051 16.5 0.1 2.2 1 1 1 2 2 2 1 Phosphotransferase enzyme family Pkinase PF00069.20 gi|154151744|ref|YP_001405362.1| - 0.0061 15.7 0.0 0.012 14.7 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain WaaY PF06176.6 gi|154151744|ref|YP_001405362.1| - 0.062 12.5 0.0 0.11 11.6 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide core biosynthesis protein (WaaY) N6_N4_Mtase PF01555.13 gi|154151745|ref|YP_001405363.1| - 3e-12 46.5 0.0 5.7e-08 32.5 0.0 2.2 2 0 0 2 2 2 2 DNA methylase Methyltransf_26 PF13659.1 gi|154151745|ref|YP_001405363.1| - 3.2e-08 33.6 0.2 7.1e-08 32.5 0.1 1.6 1 1 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.13 gi|154151745|ref|YP_001405363.1| - 5.7e-06 26.0 0.0 2e-05 24.2 0.0 1.8 2 0 0 2 2 2 1 Putative RNA methylase family UPF0020 MethyltransfD12 PF02086.10 gi|154151745|ref|YP_001405363.1| - 0.0065 15.9 0.0 0.0097 15.3 0.0 1.2 1 0 0 1 1 1 1 D12 class N6 adenine-specific DNA methyltransferase tRNA-synt_1c PF00749.16 gi|154151747|ref|YP_001405365.1| - 3e-74 249.5 0.0 3.9e-74 249.1 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.13 gi|154151747|ref|YP_001405365.1| - 2e-21 76.4 0.0 3.5e-20 72.4 0.0 2.2 1 1 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain tRNA-synt_1d PF00750.14 gi|154151747|ref|YP_001405365.1| - 0.0061 15.4 0.0 0.011 14.6 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (R) tRNA-synt_1f PF01921.13 gi|154151747|ref|YP_001405365.1| - 0.023 13.3 0.0 3.7 6.1 0.0 2.6 3 0 0 3 3 3 0 tRNA synthetases class I (K) OHCU_decarbox PF09349.5 gi|154151747|ref|YP_001405365.1| - 0.065 13.5 0.2 1.8 8.8 0.0 2.3 2 0 0 2 2 2 0 OHCU decarboxylase polyprenyl_synt PF00348.12 gi|154151748|ref|YP_001405366.1| - 1.4e-62 210.9 1.5 1.9e-62 210.5 1.1 1.2 1 0 0 1 1 1 1 Polyprenyl synthetase Lactamase_B PF00753.22 gi|154151749|ref|YP_001405367.1| - 8.5e-17 61.4 0.5 8.2e-16 58.2 0.3 2.4 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily RMMBL PF07521.7 gi|154151749|ref|YP_001405367.1| - 2e-09 37.0 0.5 5.1e-09 35.7 0.3 1.7 1 0 0 1 1 1 1 RNA-metabolising metallo-beta-lactamase Lactamase_B_2 PF12706.2 gi|154151749|ref|YP_001405367.1| - 1e-07 31.7 0.2 4.4e-07 29.6 0.1 1.9 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Hydrolase_4 PF12146.3 gi|154151749|ref|YP_001405367.1| - 0.13 12.1 0.2 2.4 8.0 0.0 2.6 2 0 0 2 2 2 0 Putative lysophospholipase FMN_dh PF01070.13 gi|154151750|ref|YP_001405368.1| - 1.1e-34 119.9 0.0 2e-20 72.9 0.0 2.1 1 1 1 2 2 2 2 FMN-dependent dehydrogenase IMPDH PF00478.20 gi|154151750|ref|YP_001405368.1| - 4.4e-05 22.5 5.2 0.00039 19.4 0.3 3.2 3 0 0 3 3 3 1 IMP dehydrogenase / GMP reductase domain NMO PF03060.10 gi|154151750|ref|YP_001405368.1| - 0.0022 17.1 0.3 0.0082 15.3 0.2 1.8 2 0 0 2 2 2 1 Nitronate monooxygenase Glu_synthase PF01645.12 gi|154151750|ref|YP_001405368.1| - 0.003 16.5 2.1 0.0091 14.9 1.5 1.9 1 1 0 1 1 1 1 Conserved region in glutamate synthase DeoC PF01791.4 gi|154151750|ref|YP_001405368.1| - 0.032 13.5 2.6 1.7 7.8 1.8 2.9 1 1 0 1 1 1 0 DeoC/LacD family aldolase DHO_dh PF01180.16 gi|154151750|ref|YP_001405368.1| - 0.037 12.9 0.1 0.082 11.8 0.1 1.5 1 0 0 1 1 1 0 Dihydroorotate dehydrogenase AA_kinase PF00696.23 gi|154151751|ref|YP_001405369.1| - 4.2e-39 134.5 3.7 4.8e-39 134.3 2.5 1.0 1 0 0 1 1 1 1 Amino acid kinase family GHMP_kinases_N PF00288.21 gi|154151752|ref|YP_001405370.1| - 5e-18 64.9 1.7 6.3e-18 64.6 0.1 2.0 2 1 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.8 gi|154151752|ref|YP_001405370.1| - 7.6e-12 45.2 0.3 2.1e-11 43.8 0.2 1.8 1 0 0 1 1 1 1 GHMP kinases C terminal GalKase_gal_bdg PF10509.4 gi|154151752|ref|YP_001405370.1| - 0.0052 16.0 0.0 0.01 15.1 0.0 1.5 1 0 0 1 1 1 1 Galactokinase galactose-binding signature Memo PF01875.12 gi|154151753|ref|YP_001405371.1| - 4.7e-68 229.0 0.0 5.5e-68 228.8 0.0 1.0 1 0 0 1 1 1 1 Memo-like protein LigB PF02900.13 gi|154151753|ref|YP_001405371.1| - 0.0086 15.0 0.0 0.01 14.8 0.0 1.2 1 0 0 1 1 1 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase fn1 PF00039.13 gi|154151753|ref|YP_001405371.1| - 0.028 14.2 0.2 0.059 13.1 0.1 1.4 1 0 0 1 1 1 0 Fibronectin type I domain Ribosomal_S2 PF00318.15 gi|154151754|ref|YP_001405372.1| - 3.1e-40 137.6 0.2 3.8e-19 68.7 0.0 2.0 1 1 1 2 2 2 2 Ribosomal protein S2 PHP PF02811.14 gi|154151754|ref|YP_001405372.1| - 0.0059 16.4 0.0 0.016 15.0 0.0 1.6 2 0 0 2 2 2 1 PHP domain Avirulence PF03377.8 gi|154151754|ref|YP_001405372.1| - 0.065 11.9 0.0 0.084 11.5 0.0 1.2 1 0 0 1 1 1 0 Xanthomonas avirulence protein, Avr/PthA Enolase_C PF00113.17 gi|154151755|ref|YP_001405373.1| - 5.1e-71 239.0 0.3 1.4e-70 237.6 0.1 1.7 2 0 0 2 2 2 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.11 gi|154151755|ref|YP_001405373.1| - 8.1e-40 135.8 0.1 1.8e-39 134.6 0.1 1.6 1 0 0 1 1 1 1 Enolase, N-terminal domain MR_MLE_C PF13378.1 gi|154151755|ref|YP_001405373.1| - 0.00016 21.6 0.5 0.00043 20.2 0.0 1.9 2 0 0 2 2 2 1 Enolase C-terminal domain-like MR_MLE PF01188.16 gi|154151755|ref|YP_001405373.1| - 0.00037 20.9 0.0 0.0008 19.8 0.0 1.7 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain MAAL_C PF07476.6 gi|154151755|ref|YP_001405373.1| - 0.0087 15.0 0.3 0.021 13.7 0.0 1.8 2 0 0 2 2 2 1 Methylaspartate ammonia-lyase C-terminus RNA_pol_Rpb6 PF01192.17 gi|154151756|ref|YP_001405374.1| - 6.3e-20 70.6 0.4 7.1e-20 70.5 0.3 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb6 RNA_pol_N PF01194.12 gi|154151757|ref|YP_001405375.1| - 2e-30 104.5 0.6 2.2e-30 104.4 0.4 1.0 1 0 0 1 1 1 1 RNA polymerases N / 8 kDa subunit Chordopox_RPO7 PF05864.7 gi|154151757|ref|YP_001405375.1| - 0.039 14.0 0.2 0.056 13.5 0.2 1.3 1 1 0 1 1 1 0 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) Ribosomal_S9 PF00380.14 gi|154151758|ref|YP_001405376.1| - 1.9e-35 121.7 0.4 2.2e-35 121.5 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 DUF3157 PF11355.3 gi|154151758|ref|YP_001405376.1| - 0.13 11.5 0.1 0.18 11.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3157) Ribosomal_L13 PF00572.13 gi|154151759|ref|YP_001405377.1| - 2.2e-20 73.0 0.0 2.6e-20 72.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L13 Ribosomal_L18e PF00828.14 gi|154151760|ref|YP_001405378.1| - 1.6e-14 54.3 0.1 2.1e-14 54.0 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L18e/L15 RNA_pol_A_bac PF01000.21 gi|154151761|ref|YP_001405379.1| - 4e-28 97.8 0.0 3.7e-27 94.6 0.0 2.0 2 0 0 2 2 2 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.19 gi|154151761|ref|YP_001405379.1| - 4e-12 45.0 0.0 4.9e-12 44.7 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Fer4_10 PF13237.1 gi|154151761|ref|YP_001405379.1| - 3.1e-05 23.6 9.2 3.1e-05 23.6 6.4 1.9 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.2 gi|154151761|ref|YP_001405379.1| - 0.00011 22.5 9.2 0.00011 22.5 6.4 1.9 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4 PF00037.22 gi|154151761|ref|YP_001405379.1| - 0.011 15.3 3.5 0.011 15.3 2.4 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_16 PF13484.1 gi|154151761|ref|YP_001405379.1| - 0.018 15.7 12.1 0.039 14.7 0.5 2.9 3 0 0 3 3 2 0 4Fe-4S double cluster binding domain Fer4_8 PF13183.1 gi|154151761|ref|YP_001405379.1| - 0.03 14.3 11.0 0.03 14.3 7.6 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_9 PF13187.1 gi|154151761|ref|YP_001405379.1| - 0.12 12.6 16.0 0.43 10.8 2.9 2.9 2 1 2 4 4 4 0 4Fe-4S dicluster domain Fer4_18 PF13746.1 gi|154151761|ref|YP_001405379.1| - 1.3 9.4 14.2 5 7.6 3.6 2.8 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.2 gi|154151761|ref|YP_001405379.1| - 1.9 9.0 23.8 0.09 13.1 1.7 3.3 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_15 PF13459.1 gi|154151761|ref|YP_001405379.1| - 7.7 7.1 12.4 0.51 10.9 1.9 2.6 1 1 1 2 2 2 0 4Fe-4S single cluster domain Ribosomal_S11 PF00411.14 gi|154151762|ref|YP_001405380.1| - 6.5e-45 151.8 4.8 1.9e-44 150.2 3.3 1.6 1 1 0 1 1 1 1 Ribosomal protein S11 Pilus_CpaD PF09476.5 gi|154151762|ref|YP_001405380.1| - 0.0097 15.3 0.9 0.013 14.9 0.6 1.3 1 0 0 1 1 1 1 Pilus biogenesis CpaD protein (pilus_cpaD) S4 PF01479.20 gi|154151763|ref|YP_001405381.1| - 7e-15 54.1 0.1 1.5e-14 53.0 0.1 1.6 1 0 0 1 1 1 1 S4 domain Ribosomal_S4 PF00163.14 gi|154151763|ref|YP_001405381.1| - 6.5e-08 32.8 1.7 1.6e-07 31.5 1.2 1.6 1 0 0 1 1 1 1 Ribosomal protein S4/S9 N-terminal domain Ribosomal_S13 PF00416.17 gi|154151764|ref|YP_001405382.1| - 3e-31 108.0 1.3 3.7e-31 107.7 0.9 1.1 1 0 0 1 1 1 1 Ribosomal protein S13/S18 Isochorismatase PF00857.15 gi|154151765|ref|YP_001405383.1| - 2e-38 132.0 0.0 2.3e-38 131.8 0.0 1.0 1 0 0 1 1 1 1 Isochorismatase family TauE PF01925.14 gi|154151766|ref|YP_001405384.1| - 1.9e-37 128.9 31.8 2.4e-37 128.6 22.0 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE DUF3169 PF11368.3 gi|154151766|ref|YP_001405384.1| - 4.3 6.4 8.5 4.3 6.4 0.3 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3169) CBS PF00571.23 gi|154151767|ref|YP_001405385.1| - 6.9e-31 105.7 10.8 2.7e-09 36.6 0.1 4.2 4 0 0 4 4 4 4 CBS domain Ribosomal_L9_C PF03948.9 gi|154151767|ref|YP_001405385.1| - 0.0022 18.0 0.3 4.1 7.5 0.0 3.8 5 0 0 5 5 5 2 Ribosomal protein L9, C-terminal domain Mistic PF11458.3 gi|154151767|ref|YP_001405385.1| - 0.096 13.0 0.1 0.52 10.7 0.0 2.1 2 1 0 2 2 2 0 Membrane-integrating protein Mistic Rep_fac_C PF08542.6 gi|154151767|ref|YP_001405385.1| - 0.14 12.1 0.4 15 5.6 0.0 2.6 2 1 0 2 2 2 0 Replication factor C C-terminal domain CBS PF00571.23 gi|154151768|ref|YP_001405386.1| - 9.1e-51 169.4 5.9 1.9e-14 53.1 0.1 4.2 4 0 0 4 4 4 4 CBS domain DisA_N PF02457.11 gi|154151768|ref|YP_001405386.1| - 0.099 11.7 0.0 2.5 7.2 0.0 2.3 2 0 0 2 2 2 0 DisA bacterial checkpoint controller nucleotide-binding CBS PF00571.23 gi|154151769|ref|YP_001405387.1| - 6.5e-38 128.2 6.1 3.6e-14 52.2 0.8 4.1 4 0 0 4 4 4 4 CBS domain DUF1133 PF06576.6 gi|154151769|ref|YP_001405387.1| - 0.06 12.5 0.0 0.13 11.3 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1133) CBS PF00571.23 gi|154151770|ref|YP_001405388.1| - 4.3e-30 103.2 6.1 1.5e-18 66.2 1.0 2.8 3 0 0 3 3 3 2 CBS domain DUF2577 PF10844.3 gi|154151770|ref|YP_001405388.1| - 0.014 15.4 0.3 0.23 11.5 0.1 2.6 2 1 0 2 2 2 0 Protein of unknown function (DUF2577) Cache_3 PF14827.1 gi|154151770|ref|YP_001405388.1| - 0.043 13.7 0.1 0.07 13.0 0.1 1.4 1 0 0 1 1 1 0 Sensory domain of two-component sensor kinase MMR_HSR1 PF01926.18 gi|154151771|ref|YP_001405389.1| - 1.5e-14 53.9 0.0 2.1e-14 53.4 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.22 gi|154151771|ref|YP_001405389.1| - 5.7e-10 38.9 0.3 6.3e-07 29.0 0.2 2.9 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Arf PF00025.16 gi|154151771|ref|YP_001405389.1| - 1.9e-07 30.5 0.0 0.0017 17.6 0.0 2.5 2 1 0 2 2 2 2 ADP-ribosylation factor family Miro PF08477.8 gi|154151771|ref|YP_001405389.1| - 2e-05 25.0 0.0 0.0002 21.8 0.0 2.1 1 1 0 1 1 1 1 Miro-like protein AAA_17 PF13207.1 gi|154151771|ref|YP_001405389.1| - 2.1e-05 25.3 0.2 8.6e-05 23.3 0.1 2.0 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.1 gi|154151771|ref|YP_001405389.1| - 5.1e-05 23.5 0.0 7.3e-05 23.0 0.0 1.3 1 0 0 1 1 1 1 AAA domain FeoB_N PF02421.13 gi|154151771|ref|YP_001405389.1| - 5.7e-05 22.4 0.1 0.0009 18.5 0.1 2.5 1 1 0 1 1 1 1 Ferrous iron transport protein B SRPRB PF09439.5 gi|154151771|ref|YP_001405389.1| - 0.00038 19.7 0.0 0.24 10.5 0.0 2.4 2 1 0 2 2 2 2 Signal recognition particle receptor beta subunit AAA PF00004.24 gi|154151771|ref|YP_001405389.1| - 0.00042 20.5 0.0 0.019 15.1 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.17 gi|154151771|ref|YP_001405389.1| - 0.0011 19.0 0.0 0.0021 18.2 0.0 1.4 1 0 0 1 1 1 1 RNA helicase Dynamin_N PF00350.18 gi|154151771|ref|YP_001405389.1| - 0.005 16.6 0.0 0.45 10.3 0.0 2.2 1 1 1 2 2 2 1 Dynamin family Parvo_NS1 PF01057.12 gi|154151771|ref|YP_001405389.1| - 0.0093 14.8 0.0 0.015 14.1 0.0 1.2 1 0 0 1 1 1 1 Parvovirus non-structural protein NS1 AAA_22 PF13401.1 gi|154151771|ref|YP_001405389.1| - 0.013 15.6 0.0 0.033 14.3 0.0 1.8 2 1 0 2 2 1 0 AAA domain DUF258 PF03193.11 gi|154151771|ref|YP_001405389.1| - 0.026 13.6 0.0 0.04 13.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function, DUF258 AAA_16 PF13191.1 gi|154151771|ref|YP_001405389.1| - 0.03 14.3 0.0 0.045 13.7 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain RuvB_N PF05496.7 gi|154151771|ref|YP_001405389.1| - 0.034 13.1 0.0 0.063 12.3 0.0 1.4 1 0 0 1 1 1 0 Holliday junction DNA helicase ruvB N-terminus ABC_tran PF00005.22 gi|154151771|ref|YP_001405389.1| - 0.045 14.0 0.0 0.061 13.6 0.0 1.4 1 1 0 1 1 1 0 ABC transporter AAA_28 PF13521.1 gi|154151771|ref|YP_001405389.1| - 0.045 13.6 0.0 0.1 12.5 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA_19 PF13245.1 gi|154151771|ref|YP_001405389.1| - 0.051 13.3 1.3 0.074 12.8 0.0 1.9 3 0 0 3 3 1 0 Part of AAA domain PPV_E1_C PF00519.12 gi|154151771|ref|YP_001405389.1| - 0.053 12.1 0.0 0.09 11.3 0.0 1.3 1 0 0 1 1 1 0 Papillomavirus helicase NACHT PF05729.7 gi|154151771|ref|YP_001405389.1| - 0.055 13.1 0.0 0.18 11.4 0.0 1.8 2 0 0 2 2 2 0 NACHT domain ATP_bind_1 PF03029.12 gi|154151771|ref|YP_001405389.1| - 0.055 12.9 0.0 2.7 7.4 0.0 2.6 2 1 0 3 3 3 0 Conserved hypothetical ATP binding protein AAA_24 PF13479.1 gi|154151771|ref|YP_001405389.1| - 0.065 12.8 0.0 0.13 11.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain cobW PF02492.14 gi|154151771|ref|YP_001405389.1| - 0.08 12.3 0.0 0.71 9.2 0.0 2.5 1 1 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_25 PF13481.1 gi|154151771|ref|YP_001405389.1| - 0.099 12.0 0.0 0.16 11.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.1 gi|154151771|ref|YP_001405389.1| - 0.1 12.5 0.0 0.18 11.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain ArgK PF03308.11 gi|154151771|ref|YP_001405389.1| - 0.11 11.2 0.1 0.54 8.9 0.0 2.1 2 1 0 2 2 2 0 ArgK protein Arch_ATPase PF01637.13 gi|154151771|ref|YP_001405389.1| - 0.11 12.1 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 Archaeal ATPase MobB PF03205.9 gi|154151771|ref|YP_001405389.1| - 0.12 12.1 0.0 0.24 11.0 0.0 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B Septin PF00735.13 gi|154151771|ref|YP_001405389.1| - 0.13 11.2 0.0 0.16 10.9 0.0 1.2 1 0 0 1 1 1 0 Septin NB-ARC PF00931.17 gi|154151771|ref|YP_001405389.1| - 0.15 10.9 0.0 0.22 10.3 0.0 1.2 1 0 0 1 1 1 0 NB-ARC domain DUF2072 PF09845.4 gi|154151772|ref|YP_001405390.1| - 9.2e-47 158.2 3.9 1.1e-46 158.0 2.7 1.0 1 0 0 1 1 1 1 Zn-ribbon containing protein (DUF2072) zinc_ribbon_2 PF13240.1 gi|154151772|ref|YP_001405390.1| - 0.0017 17.7 4.7 0.0017 17.7 3.2 1.6 2 0 0 2 2 2 1 zinc-ribbon domain DUF1451 PF07295.6 gi|154151772|ref|YP_001405390.1| - 0.035 13.8 0.9 0.035 13.8 0.7 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1451) DUF2175 PF09943.4 gi|154151772|ref|YP_001405390.1| - 0.049 13.6 1.4 0.064 13.3 0.1 1.8 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2175) zf-ribbon_3 PF13248.1 gi|154151772|ref|YP_001405390.1| - 2.3 7.5 5.2 8 5.8 3.6 1.9 1 1 0 1 1 1 0 zinc-ribbon domain Ribosomal_S13_N PF08069.7 gi|154151774|ref|YP_001405392.1| - 1.3e-26 92.2 0.6 2.3e-26 91.3 0.2 1.6 2 0 0 2 2 2 1 Ribosomal S13/S15 N-terminal domain Ribosomal_S15 PF00312.17 gi|154151774|ref|YP_001405392.1| - 4.1e-16 58.4 0.1 6.1e-16 57.9 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S15 DHHA1 PF02272.14 gi|154151775|ref|YP_001405393.1| - 2.6e-10 39.8 0.0 6.4e-10 38.6 0.0 1.7 1 0 0 1 1 1 1 DHHA1 domain DHH PF01368.15 gi|154151775|ref|YP_001405393.1| - 7.3e-07 28.9 0.1 1e-05 25.2 0.0 2.2 1 1 0 1 1 1 1 DHH family Pcc1 PF09341.5 gi|154151776|ref|YP_001405394.1| - 0.13 12.3 0.1 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 Transcription factor Pcc1 Ribosomal_S3Ae PF01015.13 gi|154151777|ref|YP_001405395.1| - 9.6e-66 220.8 2.7 1.2e-65 220.5 1.9 1.0 1 0 0 1 1 1 1 Ribosomal S3Ae family OSCP PF00213.13 gi|154151777|ref|YP_001405395.1| - 0.047 13.5 0.1 0.077 12.8 0.0 1.4 1 0 0 1 1 1 0 ATP synthase delta (OSCP) subunit Sld5 PF05916.6 gi|154151777|ref|YP_001405395.1| - 0.088 13.1 0.0 0.13 12.5 0.0 1.4 1 0 0 1 1 1 0 GINS complex protein Bactofilin PF04519.8 gi|154151778|ref|YP_001405396.1| - 5.5e-08 32.7 12.1 1.5e-05 24.8 2.2 4.0 2 2 2 4 4 4 3 Polymer-forming cytoskeletal Hexapep PF00132.19 gi|154151778|ref|YP_001405396.1| - 8.5e-06 25.0 15.3 0.0013 18.1 0.6 5.4 4 1 1 6 6 6 3 Bacterial transferase hexapeptide (six repeats) DUF342 PF03961.8 gi|154151778|ref|YP_001405396.1| - 1 7.7 8.7 0.39 9.0 3.2 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF342) TehB PF03848.9 gi|154151779|ref|YP_001405397.1| - 0.11 11.6 0.1 0.17 11.0 0.0 1.2 1 0 0 1 1 1 0 Tellurite resistance protein TehB Methyltransf_23 PF13489.1 gi|154151779|ref|YP_001405397.1| - 0.12 12.0 0.0 0.3 10.7 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_31 PF13847.1 gi|154151779|ref|YP_001405397.1| - 0.23 11.0 0.6 0.47 10.0 0.4 1.5 1 0 0 1 1 1 0 Methyltransferase domain HxlR PF01638.12 gi|154151780|ref|YP_001405398.1| - 1.3e-23 82.3 0.5 1.7e-23 82.0 0.3 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_20 PF12840.2 gi|154151780|ref|YP_001405398.1| - 0.00074 19.2 0.0 0.001 18.8 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain DUF4423 PF14394.1 gi|154151780|ref|YP_001405398.1| - 0.0009 18.8 0.0 0.001 18.6 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_24 PF13412.1 gi|154151780|ref|YP_001405398.1| - 0.0026 17.1 0.1 0.0054 16.0 0.1 1.7 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding PadR PF03551.9 gi|154151780|ref|YP_001405398.1| - 0.0067 16.1 0.1 0.0081 15.9 0.0 1.2 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family DUF2513 PF10711.4 gi|154151780|ref|YP_001405398.1| - 0.0067 16.4 0.0 0.0088 16.1 0.0 1.1 1 0 0 1 1 1 1 Hypothetical protein (DUF2513) HTH_5 PF01022.15 gi|154151780|ref|YP_001405398.1| - 0.0077 15.8 0.1 0.012 15.2 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_34 PF13601.1 gi|154151780|ref|YP_001405398.1| - 0.055 13.5 0.1 0.073 13.1 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF1957 PF09210.6 gi|154151780|ref|YP_001405398.1| - 0.06 13.3 0.0 0.088 12.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1957) DUF959 PF06121.9 gi|154151780|ref|YP_001405398.1| - 0.11 12.1 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF959) HTH_45 PF14947.1 gi|154151780|ref|YP_001405398.1| - 0.13 12.1 0.3 0.2 11.5 0.1 1.5 1 1 0 1 1 1 0 Winged helix-turn-helix Prismane PF03063.15 gi|154151781|ref|YP_001405399.1| - 4.3e-162 540.1 0.0 4.8e-162 539.9 0.0 1.0 1 0 0 1 1 1 1 Prismane/CO dehydrogenase family DEAD PF00270.24 gi|154151782|ref|YP_001405400.1| - 6.9e-23 80.9 0.0 1.5e-22 79.8 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|154151782|ref|YP_001405400.1| - 5.7e-13 48.5 0.0 1.5e-12 47.2 0.0 1.7 1 1 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|154151782|ref|YP_001405400.1| - 0.00028 20.7 0.0 0.00058 19.7 0.0 1.6 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit MarR_2 PF12802.2 gi|154151783|ref|YP_001405401.1| - 8.3e-08 31.7 0.5 2.1e-07 30.5 0.0 1.8 2 0 0 2 2 1 1 MarR family HTH_24 PF13412.1 gi|154151783|ref|YP_001405401.1| - 1.3e-07 30.8 0.0 3.3e-07 29.5 0.0 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.17 gi|154151783|ref|YP_001405401.1| - 2e-06 27.3 0.1 5.6e-06 25.9 0.0 1.8 2 0 0 2 2 2 1 MarR family HTH_Crp_2 PF13545.1 gi|154151783|ref|YP_001405401.1| - 2.1e-06 27.4 0.1 8.6e-05 22.2 0.0 2.4 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_11 PF08279.7 gi|154151783|ref|YP_001405401.1| - 1.1e-05 24.9 0.0 2.7e-05 23.7 0.0 1.7 1 0 0 1 1 1 1 HTH domain HTH_27 PF13463.1 gi|154151783|ref|YP_001405401.1| - 9.3e-05 22.6 0.0 0.00022 21.4 0.0 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain Rrf2 PF02082.15 gi|154151783|ref|YP_001405401.1| - 0.00019 21.4 0.0 0.00044 20.3 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator HTH_23 PF13384.1 gi|154151783|ref|YP_001405401.1| - 0.00029 20.4 0.0 0.0006 19.3 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain HTH_5 PF01022.15 gi|154151783|ref|YP_001405401.1| - 0.00063 19.3 0.0 0.0015 18.1 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.1 gi|154151783|ref|YP_001405401.1| - 0.00093 18.9 0.0 0.0018 18.0 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix EAP30 PF04157.11 gi|154151783|ref|YP_001405401.1| - 0.0015 17.7 0.1 0.0071 15.5 0.0 1.9 2 0 0 2 2 2 1 EAP30/Vps36 family HTH_3 PF01381.17 gi|154151783|ref|YP_001405401.1| - 0.0016 18.2 0.1 0.0038 17.0 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix Fe_dep_repress PF01325.14 gi|154151783|ref|YP_001405401.1| - 0.0025 17.7 0.0 0.0058 16.5 0.0 1.6 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_IclR PF09339.5 gi|154151783|ref|YP_001405401.1| - 0.0025 17.3 0.0 0.0045 16.5 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_29 PF13551.1 gi|154151783|ref|YP_001405401.1| - 0.0027 17.8 0.4 0.0052 16.9 0.3 1.5 1 0 0 1 1 1 1 Winged helix-turn helix GntR PF00392.16 gi|154151783|ref|YP_001405401.1| - 0.0031 16.9 0.6 0.007 15.7 0.0 1.9 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family HTH_20 PF12840.2 gi|154151783|ref|YP_001405401.1| - 0.0035 17.1 0.8 0.095 12.5 0.0 3.1 3 0 0 3 3 3 1 Helix-turn-helix domain DUF977 PF06163.6 gi|154151783|ref|YP_001405401.1| - 0.0045 16.7 0.4 0.0083 15.8 0.1 1.6 2 0 0 2 2 1 1 Bacterial protein of unknown function (DUF977) DUF4423 PF14394.1 gi|154151783|ref|YP_001405401.1| - 0.005 16.3 0.0 0.0087 15.6 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_38 PF13936.1 gi|154151783|ref|YP_001405401.1| - 0.0059 16.1 0.1 0.013 15.0 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_13 PF11972.3 gi|154151783|ref|YP_001405401.1| - 0.0067 16.2 0.0 0.013 15.3 0.0 1.5 1 0 0 1 1 1 1 HTH DNA binding domain HTH_Tnp_1 PF01527.15 gi|154151783|ref|YP_001405401.1| - 0.011 15.6 0.1 0.022 14.7 0.1 1.5 1 0 0 1 1 1 0 Transposase HTH_10 PF04967.7 gi|154151783|ref|YP_001405401.1| - 0.018 14.5 0.0 0.048 13.2 0.0 1.7 1 0 0 1 1 1 0 HTH DNA binding domain RPA_C PF08784.6 gi|154151783|ref|YP_001405401.1| - 0.021 15.2 0.0 0.042 14.2 0.0 1.4 1 0 0 1 1 1 0 Replication protein A C terminal TrmB PF01978.14 gi|154151783|ref|YP_001405401.1| - 0.024 14.3 0.2 0.067 12.9 0.1 1.8 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_28 PF13518.1 gi|154151783|ref|YP_001405401.1| - 0.029 14.3 0.3 0.11 12.4 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain FaeA PF04703.7 gi|154151783|ref|YP_001405401.1| - 0.04 14.0 0.0 0.084 13.0 0.0 1.5 1 0 0 1 1 1 0 FaeA-like protein Mnd1 PF03962.10 gi|154151783|ref|YP_001405401.1| - 0.049 13.2 0.0 0.08 12.5 0.0 1.3 1 0 0 1 1 1 0 Mnd1 family HTH_1 PF00126.22 gi|154151783|ref|YP_001405401.1| - 0.06 13.0 0.1 0.21 11.3 0.0 2.0 1 1 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_37 PF13744.1 gi|154151783|ref|YP_001405401.1| - 0.07 12.9 1.4 12 5.7 0.0 2.7 3 0 0 3 3 2 0 Helix-turn-helix domain ArsR PF09824.4 gi|154151784|ref|YP_001405402.1| - 3.1e-61 205.3 0.0 3.5e-61 205.2 0.0 1.0 1 0 0 1 1 1 1 ArsR transcriptional regulator Glyco_hydro_26 PF02156.10 gi|154151784|ref|YP_001405402.1| - 0.15 11.4 0.0 0.18 11.2 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 26 Sua5_yciO_yrdC PF01300.13 gi|154151785|ref|YP_001405403.1| - 2.1e-31 108.5 0.0 3.1e-31 107.9 0.0 1.2 1 0 0 1 1 1 1 Telomere recombination zf-HYPF PF07503.7 gi|154151785|ref|YP_001405403.1| - 1.5e-25 88.2 13.8 1.1e-14 53.4 2.3 2.8 3 0 0 3 3 3 2 HypF finger Acylphosphatase PF00708.13 gi|154151785|ref|YP_001405403.1| - 4.1e-19 68.4 0.0 7e-19 67.7 0.0 1.4 1 0 0 1 1 1 1 Acylphosphatase Peptidase_M22 PF00814.20 gi|154151785|ref|YP_001405403.1| - 1e-10 41.5 0.1 7.7e-07 28.8 0.0 2.4 2 0 0 2 2 2 2 Glycoprotease family CmcH_NodU PF02543.10 gi|154151785|ref|YP_001405403.1| - 0.054 12.6 0.1 0.085 11.9 0.1 1.2 1 0 0 1 1 1 0 Carbamoyltransferase BcrAD_BadFG PF01869.15 gi|154151785|ref|YP_001405403.1| - 0.066 12.4 0.0 0.12 11.5 0.0 1.4 1 0 0 1 1 1 0 BadF/BadG/BcrA/BcrD ATPase family Pox_D5 PF03288.11 gi|154151786|ref|YP_001405404.1| - 5.8e-05 23.2 0.0 9e-05 22.6 0.0 1.3 1 0 0 1 1 1 1 Poxvirus D5 protein-like Cullin_binding PF03556.10 gi|154151786|ref|YP_001405404.1| - 0.0015 18.6 0.0 0.0031 17.6 0.0 1.5 1 1 0 1 1 1 1 Cullin binding RFX_DNA_binding PF02257.10 gi|154151786|ref|YP_001405404.1| - 0.017 15.2 0.0 0.032 14.3 0.0 1.4 1 0 0 1 1 1 0 RFX DNA-binding domain PEP-utilisers_N PF05524.8 gi|154151786|ref|YP_001405404.1| - 0.025 14.3 0.1 0.035 13.9 0.1 1.1 1 0 0 1 1 1 0 PEP-utilising enzyme, N-terminal bZIP_2 PF07716.10 gi|154151786|ref|YP_001405404.1| - 0.089 12.6 0.7 0.16 11.7 0.5 1.4 1 0 0 1 1 1 0 Basic region leucine zipper DUF4094 PF13334.1 gi|154151786|ref|YP_001405404.1| - 0.1 13.0 0.1 0.18 12.1 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4094) Retrotrans_gag PF03732.12 gi|154151786|ref|YP_001405404.1| - 0.1 12.6 0.2 0.21 11.6 0.1 1.5 1 1 0 1 1 1 0 Retrotransposon gag protein Radical_SAM PF04055.16 gi|154151787|ref|YP_001405405.1| - 1.2e-24 87.3 0.0 1.6e-24 86.9 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.1 gi|154151787|ref|YP_001405405.1| - 0.00027 20.9 0.0 0.00052 20.0 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.1 gi|154151787|ref|YP_001405405.1| - 0.015 15.4 0.0 0.027 14.5 0.0 1.3 1 0 0 1 1 1 0 4Fe-4S single cluster domain Ribosomal_60s PF00428.14 gi|154151788|ref|YP_001405406.1| - 6.4e-18 64.9 17.5 8.5e-18 64.5 12.1 1.2 1 0 0 1 1 1 1 60s Acidic ribosomal protein Cuticle_3 PF11018.3 gi|154151788|ref|YP_001405406.1| - 0.037 14.1 7.4 0.041 14.0 5.1 1.1 1 0 0 1 1 1 0 Pupal cuticle protein C1 DUF2637 PF10935.3 gi|154151788|ref|YP_001405406.1| - 0.086 12.7 5.0 0.11 12.4 3.5 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2637) BAF1_ABF1 PF04684.8 gi|154151788|ref|YP_001405406.1| - 0.47 9.2 6.7 0.41 9.4 4.0 1.3 1 1 0 1 1 1 0 BAF1 / ABF1 chromatin reorganising factor Peptidase_M55 PF04951.8 gi|154151788|ref|YP_001405406.1| - 0.76 8.9 3.7 0.94 8.6 2.6 1.0 1 0 0 1 1 1 0 D-aminopeptidase Ribosomal_L10 PF00466.15 gi|154151789|ref|YP_001405407.1| - 6.4e-24 83.7 0.1 1.6e-23 82.5 0.0 1.7 2 0 0 2 2 2 1 Ribosomal protein L10 Ribosomal_L1 PF00687.16 gi|154151790|ref|YP_001405408.1| - 4.4e-48 163.5 0.0 5.1e-48 163.3 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family Ribosomal_L11_N PF03946.9 gi|154151791|ref|YP_001405409.1| - 1.2e-24 85.5 2.2 1.2e-24 85.5 1.6 2.3 3 0 0 3 3 3 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.14 gi|154151791|ref|YP_001405409.1| - 3.4e-21 75.1 0.8 5.5e-21 74.4 0.5 1.4 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain Yip1 PF04893.12 gi|154151792|ref|YP_001405410.1| - 0.0044 16.5 3.7 0.0044 16.5 2.6 2.3 2 0 0 2 2 2 2 Yip1 domain CopD PF05425.8 gi|154151792|ref|YP_001405410.1| - 0.027 14.6 4.7 0.027 14.6 3.3 2.7 2 1 0 2 2 2 0 Copper resistance protein D Acetyltransf_3 PF13302.1 gi|154151793|ref|YP_001405411.1| - 3.1e-24 85.7 0.0 3.8e-24 85.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.19 gi|154151793|ref|YP_001405411.1| - 1.4e-08 34.6 0.0 3.7e-08 33.2 0.0 1.7 1 1 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.1 gi|154151793|ref|YP_001405411.1| - 0.0012 18.9 0.0 0.018 15.1 0.0 2.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.1 gi|154151793|ref|YP_001405411.1| - 0.0035 17.2 0.0 0.0042 17.0 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.1 gi|154151793|ref|YP_001405411.1| - 0.02 14.7 0.0 0.026 14.3 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain ABC_tran PF00005.22 gi|154151794|ref|YP_001405412.1| - 2.7e-28 98.9 0.0 4e-28 98.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|154151794|ref|YP_001405412.1| - 3.2e-13 50.2 0.0 7.3e-09 35.9 0.0 2.1 1 1 1 2 2 2 2 AAA domain AAA_23 PF13476.1 gi|154151794|ref|YP_001405412.1| - 2e-05 25.0 0.0 5.2e-05 23.6 0.0 1.6 1 1 0 1 1 1 1 AAA domain DUF4162 PF13732.1 gi|154151794|ref|YP_001405412.1| - 0.0002 21.7 0.0 0.00057 20.3 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF4162) AAA_29 PF13555.1 gi|154151794|ref|YP_001405412.1| - 0.0022 17.4 0.1 0.0043 16.5 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF258 PF03193.11 gi|154151794|ref|YP_001405412.1| - 0.039 13.1 0.0 0.064 12.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF258 DUF4329 PF14220.1 gi|154151794|ref|YP_001405412.1| - 0.043 13.7 0.0 2.2 8.2 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4329) SRP54 PF00448.17 gi|154151794|ref|YP_001405412.1| - 0.054 12.9 0.0 0.14 11.5 0.0 1.6 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA PF00004.24 gi|154151794|ref|YP_001405412.1| - 0.06 13.5 0.2 0.43 10.7 0.1 2.5 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.1 gi|154151794|ref|YP_001405412.1| - 0.064 13.4 0.0 0.28 11.3 0.0 2.1 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.1 gi|154151794|ref|YP_001405412.1| - 0.12 12.1 0.0 0.26 11.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain SMC_N PF02463.14 gi|154151794|ref|YP_001405412.1| - 0.13 11.4 0.0 15 4.7 0.0 2.2 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_13 PF13166.1 gi|154151794|ref|YP_001405412.1| - 0.19 10.1 0.0 1.1 7.6 0.0 1.9 2 0 0 2 2 2 0 AAA domain ABC2_membrane PF01061.19 gi|154151795|ref|YP_001405413.1| - 7.4e-23 80.8 21.5 1.1e-22 80.1 14.9 1.3 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.2 gi|154151795|ref|YP_001405413.1| - 6e-16 58.4 18.5 6e-16 58.4 12.8 1.8 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.2 gi|154151795|ref|YP_001405413.1| - 2.3e-05 23.4 14.2 2.3e-05 23.4 9.9 2.2 2 2 0 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.1 gi|154151795|ref|YP_001405413.1| - 0.016 14.5 16.9 0.042 13.1 11.7 1.9 1 1 0 1 1 1 0 ABC-2 family transporter protein DUF2834 PF11196.3 gi|154151795|ref|YP_001405413.1| - 0.04 14.0 4.1 2.1 8.5 0.4 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2834) DUF1947 PF09183.5 gi|154151795|ref|YP_001405413.1| - 0.13 12.0 0.3 0.25 11.1 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1947) CcmB PF03379.8 gi|154151795|ref|YP_001405413.1| - 0.25 10.5 17.8 0.12 11.6 10.4 1.8 1 1 0 2 2 2 0 CcmB protein MFS_1 PF07690.11 gi|154151796|ref|YP_001405414.1| - 7.1e-44 149.9 48.7 7.1e-44 149.9 33.7 3.5 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.19 gi|154151796|ref|YP_001405414.1| - 1.8e-07 30.0 6.5 1.8e-07 30.0 4.5 3.4 3 1 1 4 4 4 2 Sugar (and other) transporter MFS_3 PF05977.8 gi|154151796|ref|YP_001405414.1| - 2.4e-06 25.9 0.6 2.4e-06 25.9 0.4 2.8 3 1 0 3 3 3 2 Transmembrane secretion effector PUCC PF03209.10 gi|154151796|ref|YP_001405414.1| - 7.1e-06 24.9 13.4 1.7e-05 23.7 2.3 2.5 2 0 0 2 2 2 2 PUCC protein DUF3040 PF11239.3 gi|154151796|ref|YP_001405414.1| - 7.7 6.6 10.0 2.3 8.3 0.0 4.4 4 0 0 4 4 4 0 Protein of unknown function (DUF3040) Methyltransf_18 PF12847.2 gi|154151797|ref|YP_001405415.1| - 1.2e-16 61.3 0.0 1.7e-16 60.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|154151797|ref|YP_001405415.1| - 3.7e-14 53.0 0.0 5.5e-14 52.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|154151797|ref|YP_001405415.1| - 4.3e-14 52.5 0.0 5.6e-14 52.1 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|154151797|ref|YP_001405415.1| - 5.6e-14 52.4 0.0 9.1e-14 51.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|154151797|ref|YP_001405415.1| - 9e-13 48.0 0.0 1.2e-12 47.7 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.9 gi|154151797|ref|YP_001405415.1| - 1.4e-12 47.1 0.0 1.7e-12 46.8 0.0 1.1 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_25 PF13649.1 gi|154151797|ref|YP_001405415.1| - 1.8e-11 44.2 0.0 2.7e-11 43.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain TPMT PF05724.6 gi|154151797|ref|YP_001405415.1| - 5.5e-11 42.3 0.0 1e-10 41.4 0.0 1.4 1 1 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) MTS PF05175.9 gi|154151797|ref|YP_001405415.1| - 1.3e-06 27.8 0.0 1.9e-06 27.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_26 PF13659.1 gi|154151797|ref|YP_001405415.1| - 1.5e-05 25.0 0.1 2.3e-05 24.3 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.15 gi|154151797|ref|YP_001405415.1| - 0.0013 17.8 0.0 0.0016 17.6 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase PrmA PF06325.8 gi|154151797|ref|YP_001405415.1| - 0.0028 16.8 0.0 0.0038 16.3 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Ubie_methyltran PF01209.13 gi|154151797|ref|YP_001405415.1| - 0.0074 15.4 0.0 0.011 14.8 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family NodS PF05401.6 gi|154151797|ref|YP_001405415.1| - 0.013 14.8 0.0 0.017 14.4 0.0 1.1 1 0 0 1 1 1 0 Nodulation protein S (NodS) Methyltransf_15 PF09445.5 gi|154151797|ref|YP_001405415.1| - 0.031 13.8 0.0 0.045 13.3 0.0 1.3 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Methyltransf_32 PF13679.1 gi|154151797|ref|YP_001405415.1| - 0.076 12.6 0.0 0.1 12.2 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain FmrO PF07091.6 gi|154151797|ref|YP_001405415.1| - 0.099 11.6 0.0 0.14 11.1 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA methyltransferase (FmrO) DUF169 PF02596.10 gi|154151798|ref|YP_001405416.1| - 1.3e-21 77.0 0.0 1.5e-21 76.8 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 DUF169 PF02596.10 gi|154151799|ref|YP_001405417.1| - 1.1e-35 122.9 0.1 1.6e-35 122.4 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised ArCR, COG2043 Chorion_3 PF05387.6 gi|154151799|ref|YP_001405417.1| - 0.13 11.6 0.1 0.19 11.1 0.0 1.2 1 0 0 1 1 1 0 Chorion family 3 FMN_red PF03358.10 gi|154151800|ref|YP_001405418.1| - 3.4e-27 94.8 0.0 4.4e-27 94.4 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|154151800|ref|YP_001405418.1| - 1.7e-16 60.3 0.0 2.4e-16 59.8 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold HTH_28 PF13518.1 gi|154151801|ref|YP_001405419.1| - 0.012 15.5 0.0 2.1 8.4 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_8 PF02954.14 gi|154151801|ref|YP_001405419.1| - 0.056 12.9 3.0 0.47 10.0 0.1 2.6 3 0 0 3 3 3 0 Bacterial regulatory protein, Fis family SpoIIIAH PF12685.2 gi|154151801|ref|YP_001405419.1| - 0.075 12.5 0.3 0.084 12.3 0.2 1.2 1 0 0 1 1 1 0 SpoIIIAH-like protein DUF3606 PF12244.3 gi|154151801|ref|YP_001405419.1| - 0.11 12.1 0.6 14 5.4 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3606) HTH_23 PF13384.1 gi|154151801|ref|YP_001405419.1| - 0.12 12.1 0.0 11 5.7 0.0 2.3 1 1 1 2 2 2 0 Homeodomain-like domain DUF1180 PF06679.7 gi|154151801|ref|YP_001405419.1| - 0.13 12.1 4.0 0.22 11.3 2.8 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1180) SurA_N_3 PF13624.1 gi|154151801|ref|YP_001405419.1| - 0.15 12.0 0.3 2.6 8.0 0.1 2.0 2 0 0 2 2 2 0 SurA N-terminal domain DUF3359 PF11839.3 gi|154151801|ref|YP_001405419.1| - 2.4 8.5 7.3 0.35 11.2 1.4 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3359) HTH_1 PF00126.22 gi|154151801|ref|YP_001405419.1| - 3.2 7.5 8.6 9.1 6.1 0.0 2.9 3 0 0 3 3 3 0 Bacterial regulatory helix-turn-helix protein, lysR family PilX_N PF14341.1 gi|154151801|ref|YP_001405419.1| - 7.5 6.3 8.9 12 5.6 3.4 2.5 2 0 0 2 2 2 0 PilX N-terminal Spt5-NGN PF03439.8 gi|154151802|ref|YP_001405420.1| - 1.1e-22 79.5 0.5 1.9e-22 78.8 0.4 1.4 1 0 0 1 1 1 1 Early transcription elongation factor of RNA pol II, NGN section KOW PF00467.24 gi|154151802|ref|YP_001405420.1| - 1.6e-05 24.4 4.3 2.7e-05 23.7 0.2 2.6 2 1 0 2 2 2 1 KOW motif NusG PF02357.14 gi|154151802|ref|YP_001405420.1| - 0.00012 22.2 0.3 0.00056 20.1 0.0 2.1 2 0 0 2 2 2 1 Transcription termination factor nusG DUF3284 PF11687.3 gi|154151802|ref|YP_001405420.1| - 0.071 12.8 0.0 0.11 12.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3284) NTP_transferase PF00483.18 gi|154151802|ref|YP_001405420.1| - 0.081 12.2 0.1 0.1 11.8 0.1 1.1 1 0 0 1 1 1 0 Nucleotidyl transferase SecE PF00584.15 gi|154151803|ref|YP_001405421.1| - 0.002 17.6 0.0 0.0025 17.3 0.0 1.2 1 0 0 1 1 1 1 SecE/Sec61-gamma subunits of protein translocation complex PGBA_N PF15436.1 gi|154151803|ref|YP_001405421.1| - 0.045 13.0 0.0 0.049 12.9 0.0 1.1 1 0 0 1 1 1 0 Plasminogen-binding protein pgbA N-terminal PLDc_N PF13396.1 gi|154151803|ref|YP_001405421.1| - 0.098 12.3 6.4 0.14 11.8 4.5 1.5 1 1 0 1 1 1 0 Phospholipase_D-nuclease N-terminal Tubulin PF00091.20 gi|154151804|ref|YP_001405422.1| - 2.2e-37 128.9 0.3 6.8e-37 127.3 0.2 1.7 1 1 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain FtsZ_C PF12327.3 gi|154151804|ref|YP_001405422.1| - 4.3e-35 119.6 1.6 1.3e-34 118.1 1.1 1.9 1 0 0 1 1 1 1 FtsZ family, C-terminal domain ThiF PF00899.16 gi|154151804|ref|YP_001405422.1| - 0.034 13.9 0.3 0.17 11.7 0.1 2.2 2 0 0 2 2 2 0 ThiF family NAD_binding_10 PF13460.1 gi|154151804|ref|YP_001405422.1| - 0.04 13.9 0.8 1.2 9.1 0.0 2.6 2 0 0 2 2 2 0 NADH(P)-binding Herpes_UL49_2 PF04823.7 gi|154151804|ref|YP_001405422.1| - 0.12 12.3 0.0 0.41 10.6 0.0 1.8 2 0 0 2 2 2 0 Herpesvirus UL49 tegument protein Tubulin_2 PF13809.1 gi|154151804|ref|YP_001405422.1| - 2.7 6.8 5.4 9 5.1 3.8 1.8 1 1 0 1 1 1 0 Tubulin like tRNA_deacylase PF04414.7 gi|154151805|ref|YP_001405423.1| - 1.9e-67 226.5 0.0 2.6e-67 226.1 0.0 1.2 1 0 0 1 1 1 1 D-aminoacyl-tRNA deacylase Response_reg PF00072.19 gi|154151806|ref|YP_001405424.1| - 3.3e-18 65.7 0.2 5.7e-18 64.9 0.1 1.4 1 0 0 1 1 1 1 Response regulator receiver domain PAS PF00989.19 gi|154151806|ref|YP_001405424.1| - 2.3e-11 43.4 0.0 1.8e-06 27.7 0.0 3.0 3 0 0 3 3 3 2 PAS fold PAS_9 PF13426.1 gi|154151806|ref|YP_001405424.1| - 7.3e-09 35.9 0.0 0.0021 18.4 0.0 3.6 3 1 0 3 3 3 2 PAS domain PAS_4 PF08448.5 gi|154151806|ref|YP_001405424.1| - 2e-08 34.2 0.0 0.00088 19.2 0.0 2.9 2 1 0 2 2 2 2 PAS fold PAS_8 PF13188.1 gi|154151806|ref|YP_001405424.1| - 0.031 14.1 0.0 1.8 8.5 0.0 2.8 3 0 0 3 3 3 0 PAS domain Aldedh PF00171.17 gi|154151807|ref|YP_001405425.1| - 0.0051 15.2 0.0 0.0059 14.9 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family tRNA-synt_1 PF00133.17 gi|154151808|ref|YP_001405426.1| - 5.7e-196 652.1 3.4 7.3e-196 651.7 2.4 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.6 gi|154151808|ref|YP_001405426.1| - 1.1e-30 106.5 1.1 1.2e-11 43.9 0.0 3.9 3 1 0 3 3 3 3 tRNA synthetases class I (M) Anticodon_1 PF08264.8 gi|154151808|ref|YP_001405426.1| - 2e-30 105.5 0.1 4.3e-30 104.4 0.1 1.6 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.14 gi|154151808|ref|YP_001405426.1| - 1e-05 24.8 0.0 3.4e-05 23.1 0.0 1.8 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.13 gi|154151808|ref|YP_001405426.1| - 0.00012 20.8 0.1 0.0012 17.5 0.0 2.5 2 1 1 3 3 3 1 tRNA synthetases class I (K) DUF427 PF04248.7 gi|154151808|ref|YP_001405426.1| - 0.021 14.4 0.7 8 6.2 0.0 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF427) Gpi16 PF04113.9 gi|154151808|ref|YP_001405426.1| - 0.21 9.5 0.0 0.54 8.2 0.0 1.5 2 0 0 2 2 2 0 Gpi16 subunit, GPI transamidase component Thg1 PF04446.7 gi|154151809|ref|YP_001405427.1| - 1.1e-29 102.7 0.0 1.7e-29 102.1 0.0 1.3 1 0 0 1 1 1 1 tRNAHis guanylyltransferase Thg1C PF14413.1 gi|154151809|ref|YP_001405427.1| - 4e-25 87.8 0.0 5.3e-25 87.4 0.0 1.1 1 0 0 1 1 1 1 Thg1 C terminal domain PRC PF05239.11 gi|154151810|ref|YP_001405428.1| - 1.9e-12 46.8 1.8 2.7e-12 46.3 1.2 1.2 1 0 0 1 1 1 1 PRC-barrel domain CBS PF00571.23 gi|154151811|ref|YP_001405429.1| - 8.2e-29 99.1 7.9 7.7e-17 60.8 1.1 2.3 2 0 0 2 2 2 2 CBS domain Peptidase_M50 PF02163.17 gi|154151811|ref|YP_001405429.1| - 3e-18 65.4 12.4 3.3e-15 55.5 8.6 2.5 1 1 0 1 1 1 1 Peptidase family M50 Peptidase_M50B PF13398.1 gi|154151811|ref|YP_001405429.1| - 0.00033 20.1 4.9 0.00033 20.1 3.4 2.2 3 0 0 3 3 3 1 Peptidase M50B-like Radical_SAM PF04055.16 gi|154151812|ref|YP_001405430.1| - 9.2e-17 61.7 0.0 2.2e-16 60.4 0.0 1.6 2 0 0 2 2 2 1 Radical SAM superfamily HHH_3 PF12836.2 gi|154151812|ref|YP_001405430.1| - 8.9e-05 22.3 0.0 0.00027 20.8 0.0 1.7 2 0 0 2 2 2 1 Helix-hairpin-helix motif T2SK PF03934.8 gi|154151812|ref|YP_001405430.1| - 0.0067 15.6 0.0 0.011 14.9 0.0 1.2 1 0 0 1 1 1 1 Type II secretion system (T2SS), protein K PEGA PF08308.6 gi|154151812|ref|YP_001405430.1| - 0.13 12.0 0.1 0.38 10.5 0.1 1.7 1 0 0 1 1 1 0 PEGA domain MAF_flag10 PF01973.13 gi|154151813|ref|YP_001405431.1| - 3.5e-35 121.0 0.0 4.3e-35 120.7 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF115 TPK_catalytic PF04263.11 gi|154151813|ref|YP_001405431.1| - 0.058 12.9 0.3 0.18 11.3 0.0 1.8 2 0 0 2 2 2 0 Thiamin pyrophosphokinase, catalytic domain TrkA_N PF02254.13 gi|154151814|ref|YP_001405432.1| - 4e-20 71.9 0.2 1.2e-19 70.4 0.0 1.9 2 0 0 2 2 2 1 TrkA-N domain DHH PF01368.15 gi|154151814|ref|YP_001405432.1| - 6.5e-15 55.0 0.1 2.5e-14 53.1 0.1 1.9 2 0 0 2 2 2 1 DHH family DHHA1 PF02272.14 gi|154151814|ref|YP_001405432.1| - 1.2e-07 31.3 0.2 3e-07 30.0 0.0 1.8 2 0 0 2 2 2 1 DHHA1 domain NAD_binding_2 PF03446.10 gi|154151814|ref|YP_001405432.1| - 0.0024 17.7 0.0 0.0052 16.6 0.0 1.5 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_7 PF13241.1 gi|154151814|ref|YP_001405432.1| - 0.0025 18.0 0.3 0.012 15.8 0.0 2.2 3 0 0 3 3 3 1 Putative NAD(P)-binding F420_oxidored PF03807.12 gi|154151814|ref|YP_001405432.1| - 0.0043 17.4 0.0 0.026 14.9 0.0 2.4 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent Shikimate_DH PF01488.15 gi|154151814|ref|YP_001405432.1| - 0.0046 17.0 0.0 0.012 15.6 0.0 1.8 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase UDPG_MGDP_dh_N PF03721.9 gi|154151814|ref|YP_001405432.1| - 0.005 16.2 0.0 0.0096 15.3 0.0 1.5 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.11 gi|154151814|ref|YP_001405432.1| - 0.022 14.2 0.0 0.043 13.2 0.0 1.6 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Pyr_redox_3 PF13738.1 gi|154151814|ref|YP_001405432.1| - 0.026 14.5 0.0 0.96 9.4 0.0 2.7 2 2 1 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase Methyltransf_18 PF12847.2 gi|154151814|ref|YP_001405432.1| - 0.033 14.7 0.0 0.1 13.1 0.0 2.0 1 1 0 1 1 1 0 Methyltransferase domain Rubrerythrin PF02915.12 gi|154151815|ref|YP_001405433.1| - 7.2e-28 97.6 0.3 9.4e-28 97.2 0.2 1.2 1 0 0 1 1 1 1 Rubrerythrin Ferritin PF00210.19 gi|154151815|ref|YP_001405433.1| - 0.00089 19.0 1.2 0.0021 17.8 0.8 1.7 1 1 0 1 1 1 1 Ferritin-like domain HypA PF01155.14 gi|154151815|ref|YP_001405433.1| - 0.0019 17.8 0.1 0.0037 16.9 0.0 1.6 2 0 0 2 2 2 1 Hydrogenase expression/synthesis hypA family DUF3279 PF11682.3 gi|154151815|ref|YP_001405433.1| - 0.0028 17.2 0.3 0.0045 16.5 0.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3279) tRNA-synt_1g PF09334.6 gi|154151815|ref|YP_001405433.1| - 0.039 12.5 0.2 0.068 11.8 0.1 1.3 1 0 0 1 1 1 0 tRNA synthetases class I (M) RNA_POL_M_15KD PF02150.11 gi|154151815|ref|YP_001405433.1| - 0.069 12.8 0.1 0.069 12.8 0.1 1.7 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit DZR PF12773.2 gi|154151815|ref|YP_001405433.1| - 0.078 12.8 0.6 0.12 12.1 0.4 1.3 1 0 0 1 1 1 0 Double zinc ribbon DUF4379 PF14311.1 gi|154151815|ref|YP_001405433.1| - 1.3 8.9 5.1 4 7.3 3.6 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4379) Rubredoxin PF00301.15 gi|154151815|ref|YP_001405433.1| - 8.4 6.3 8.5 1.4e+02 2.4 5.9 2.3 1 1 0 1 1 1 0 Rubredoxin ABC_membrane PF00664.18 gi|154151816|ref|YP_001405434.1| - 5.1e-32 111.3 18.4 6.8e-32 110.9 12.8 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.22 gi|154151816|ref|YP_001405434.1| - 1.6e-28 99.7 0.0 2.5e-28 99.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_22 PF13401.1 gi|154151816|ref|YP_001405434.1| - 8.2e-05 22.7 0.1 0.00031 20.9 0.1 2.0 1 1 0 1 1 1 1 AAA domain TFIID_30kDa PF03540.8 gi|154151816|ref|YP_001405434.1| - 0.00023 20.9 0.1 0.00051 19.8 0.1 1.6 1 0 0 1 1 1 1 Transcription initiation factor TFIID 23-30kDa subunit DUF258 PF03193.11 gi|154151816|ref|YP_001405434.1| - 0.00046 19.3 0.0 0.00084 18.5 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF258 AAA_21 PF13304.1 gi|154151816|ref|YP_001405434.1| - 0.00053 20.0 0.0 0.3 11.0 0.0 2.2 1 1 0 2 2 2 2 AAA domain AAA_17 PF13207.1 gi|154151816|ref|YP_001405434.1| - 0.00088 20.0 0.0 0.0022 18.7 0.0 1.9 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|154151816|ref|YP_001405434.1| - 0.0013 18.0 1.5 0.028 13.6 1.1 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_30 PF13604.1 gi|154151816|ref|YP_001405434.1| - 0.0039 16.7 0.0 0.029 13.9 0.0 2.3 2 1 0 2 2 2 1 AAA domain Zeta_toxin PF06414.7 gi|154151816|ref|YP_001405434.1| - 0.0039 16.2 0.0 0.0075 15.3 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin AAA_23 PF13476.1 gi|154151816|ref|YP_001405434.1| - 0.0048 17.2 0.1 0.0093 16.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.1 gi|154151816|ref|YP_001405434.1| - 0.012 15.1 0.0 0.033 13.6 0.0 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain MMR_HSR1 PF01926.18 gi|154151816|ref|YP_001405434.1| - 0.015 15.2 0.1 0.034 14.0 0.1 1.7 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_33 PF13671.1 gi|154151816|ref|YP_001405434.1| - 0.016 15.1 0.3 0.074 12.9 0.2 2.0 1 1 0 1 1 1 0 AAA domain Rad17 PF03215.10 gi|154151816|ref|YP_001405434.1| - 0.021 13.5 0.0 0.032 12.9 0.0 1.2 1 0 0 1 1 1 0 Rad17 cell cycle checkpoint protein AAA PF00004.24 gi|154151816|ref|YP_001405434.1| - 0.022 14.9 0.1 0.35 11.0 0.1 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.1 gi|154151816|ref|YP_001405434.1| - 0.12 11.9 0.0 0.23 10.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain SbcCD_C PF13558.1 gi|154151816|ref|YP_001405434.1| - 0.44 10.5 2.5 0.56 10.1 0.0 2.4 2 1 0 2 2 1 0 Putative exonuclease SbcCD, C subunit ABC_tran PF00005.22 gi|154151817|ref|YP_001405435.1| - 1.6e-31 109.4 0.0 2.6e-31 108.7 0.0 1.3 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.18 gi|154151817|ref|YP_001405435.1| - 3.1e-26 92.3 14.9 4.2e-26 91.9 10.3 1.1 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_ATPase PF09818.4 gi|154151817|ref|YP_001405435.1| - 0.0012 17.5 1.7 0.0012 17.5 0.1 1.6 2 0 0 2 2 2 1 Predicted ATPase of the ABC class AAA_16 PF13191.1 gi|154151817|ref|YP_001405435.1| - 0.0072 16.3 0.1 0.017 15.0 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.1 gi|154151817|ref|YP_001405435.1| - 0.015 14.8 0.1 0.037 13.5 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF87 PF01935.12 gi|154151817|ref|YP_001405435.1| - 0.024 14.4 0.3 0.043 13.6 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function DUF87 SMC_N PF02463.14 gi|154151817|ref|YP_001405435.1| - 0.029 13.6 0.0 0.35 10.0 0.0 2.0 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain AAA_17 PF13207.1 gi|154151817|ref|YP_001405435.1| - 0.091 13.5 0.0 0.22 12.3 0.0 1.8 1 0 0 1 1 1 0 AAA domain FMN_red PF03358.10 gi|154151818|ref|YP_001405436.1| - 3.7e-34 117.4 0.0 7.3e-34 116.4 0.0 1.5 2 0 0 2 2 2 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.12 gi|154151818|ref|YP_001405436.1| - 6e-16 58.5 0.0 8.6e-16 58.0 0.0 1.2 1 0 0 1 1 1 1 Flavodoxin-like fold Flavodoxin_5 PF12724.2 gi|154151818|ref|YP_001405436.1| - 0.08 12.9 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 Flavodoxin domain Methyltransf_23 PF13489.1 gi|154151819|ref|YP_001405437.1| - 2.5e-14 53.3 0.0 3.4e-14 52.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|154151819|ref|YP_001405437.1| - 9.8e-14 51.6 0.0 1.5e-13 51.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|154151819|ref|YP_001405437.1| - 1.8e-12 47.6 0.0 2.7e-12 47.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|154151819|ref|YP_001405437.1| - 7.3e-09 35.9 0.0 1.2e-08 35.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|154151819|ref|YP_001405437.1| - 8.9e-09 35.1 0.0 1.8e-08 34.0 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|154151819|ref|YP_001405437.1| - 1.1e-07 32.4 0.0 1.7e-07 31.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|154151819|ref|YP_001405437.1| - 6.3e-05 22.1 0.0 9.1e-05 21.6 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family CMAS PF02353.15 gi|154151819|ref|YP_001405437.1| - 0.0012 17.9 0.0 0.0018 17.4 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase MTS PF05175.9 gi|154151819|ref|YP_001405437.1| - 0.011 15.1 0.0 0.016 14.5 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_26 PF13659.1 gi|154151819|ref|YP_001405437.1| - 0.024 14.6 0.0 0.062 13.3 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain NodS PF05401.6 gi|154151819|ref|YP_001405437.1| - 0.15 11.4 0.0 0.19 11.1 0.0 1.2 1 0 0 1 1 1 0 Nodulation protein S (NodS) Transglut_core PF01841.14 gi|154151820|ref|YP_001405438.1| - 4.2e-16 59.1 0.2 5.7e-16 58.7 0.1 1.2 1 0 0 1 1 1 1 Transglutaminase-like superfamily CAP PF00188.21 gi|154151821|ref|YP_001405439.1| - 7.6e-20 71.6 1.4 2e-19 70.2 1.0 1.7 1 0 0 1 1 1 1 Cysteine-rich secretory protein family zf-AN1 PF01428.11 gi|154151821|ref|YP_001405439.1| - 1.8e-13 50.1 7.2 2.8e-13 49.4 5.0 1.3 1 0 0 1 1 1 1 AN1-like Zinc finger FYVE PF01363.16 gi|154151821|ref|YP_001405439.1| - 0.0054 16.6 0.5 0.0077 16.0 0.3 1.3 1 0 0 1 1 1 1 FYVE zinc finger zf-BED PF02892.10 gi|154151821|ref|YP_001405439.1| - 0.45 10.3 3.8 17 5.2 0.7 3.4 3 0 0 3 3 3 0 BED zinc finger zf-B_box PF00643.19 gi|154151821|ref|YP_001405439.1| - 0.66 9.9 5.2 1.1 9.2 3.6 1.3 1 0 0 1 1 1 0 B-box zinc finger Arc_trans_TRASH PF08394.5 gi|154151821|ref|YP_001405439.1| - 0.78 9.9 5.5 8.3 6.6 0.6 2.4 2 0 0 2 2 2 0 Archaeal TRASH domain Nitroreductase PF00881.19 gi|154151822|ref|YP_001405440.1| - 9.2e-34 116.6 0.0 1.2e-33 116.2 0.0 1.1 1 0 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.1 gi|154151822|ref|YP_001405440.1| - 0.0015 17.7 0.1 0.0047 16.1 0.1 1.7 1 1 0 1 1 1 1 Putative TM nitroreductase PemK PF02452.12 gi|154151823|ref|YP_001405441.1| - 5.8e-09 36.1 0.0 7.3e-09 35.8 0.0 1.1 1 0 0 1 1 1 1 PemK-like protein ABC_tran PF00005.22 gi|154151824|ref|YP_001405442.1| - 5.3e-26 91.5 0.0 7.4e-26 91.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|154151824|ref|YP_001405442.1| - 1.9e-12 47.7 0.0 6.1e-06 26.4 0.0 2.1 1 1 0 2 2 2 2 AAA domain AAA_23 PF13476.1 gi|154151824|ref|YP_001405442.1| - 8.4e-07 29.5 0.0 1e-06 29.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.14 gi|154151824|ref|YP_001405442.1| - 0.0034 16.6 0.1 1.4 8.1 0.1 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_15 PF13175.1 gi|154151824|ref|YP_001405442.1| - 0.0072 15.4 0.0 0.063 12.3 0.0 1.9 2 0 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.1 gi|154151824|ref|YP_001405442.1| - 0.015 14.7 0.4 0.028 13.9 0.3 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_13 PF13166.1 gi|154151824|ref|YP_001405442.1| - 0.017 13.5 0.0 3.5 5.9 0.1 2.1 2 0 0 2 2 2 0 AAA domain AAA_19 PF13245.1 gi|154151824|ref|YP_001405442.1| - 0.022 14.5 0.5 0.066 12.9 0.2 1.8 2 0 0 2 2 2 0 Part of AAA domain DUF4162 PF13732.1 gi|154151824|ref|YP_001405442.1| - 0.039 14.4 0.0 0.073 13.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4162) MobB PF03205.9 gi|154151824|ref|YP_001405442.1| - 0.081 12.6 0.6 0.32 10.7 0.2 2.0 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_17 PF13207.1 gi|154151824|ref|YP_001405442.1| - 0.14 12.9 0.0 0.3 11.9 0.0 1.7 1 0 0 1 1 1 0 AAA domain ABC2_membrane_3 PF12698.2 gi|154151825|ref|YP_001405443.1| - 3.2e-13 49.4 15.1 3.2e-13 49.4 10.5 2.5 2 1 0 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.2 gi|154151826|ref|YP_001405444.1| - 2.7e-16 59.5 3.8 3.5e-16 59.1 2.6 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.2 gi|154151826|ref|YP_001405444.1| - 2.2e-14 53.0 0.3 7.3e-14 51.2 0.2 1.9 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.2 gi|154151826|ref|YP_001405444.1| - 4.2e-12 45.7 0.4 1.3e-11 44.0 0.3 1.8 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.1 gi|154151826|ref|YP_001405444.1| - 0.025 13.8 14.3 0.01 15.1 7.3 1.9 2 0 0 2 2 2 0 ABC-2 family transporter protein O-antigen_lig PF13425.1 gi|154151826|ref|YP_001405444.1| - 3.1 7.7 18.5 0.67 9.9 0.1 3.2 2 1 0 2 2 2 0 O-antigen ligase like membrane protein Tetraspannin PF00335.15 gi|154151826|ref|YP_001405444.1| - 4.8 6.3 16.0 0.95 8.6 6.6 2.3 3 0 0 3 3 3 0 Tetraspanin family RDD PF06271.7 gi|154151828|ref|YP_001405446.1| - 1.3e-27 96.3 9.0 2e-27 95.7 6.2 1.3 1 1 0 1 1 1 1 RDD family zinc_ribbon_2 PF13240.1 gi|154151828|ref|YP_001405446.1| - 5.9e-07 28.7 2.8 8.8e-07 28.2 1.9 1.3 1 0 0 1 1 1 1 zinc-ribbon domain zf-ribbon_3 PF13248.1 gi|154151828|ref|YP_001405446.1| - 6.4e-07 28.3 2.3 9.7e-07 27.8 1.6 1.3 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.2 gi|154151828|ref|YP_001405446.1| - 1.4e-05 24.8 1.8 1.9e-05 24.3 1.2 1.2 1 0 0 1 1 1 1 Double zinc ribbon Nudix_N_2 PF14803.1 gi|154151828|ref|YP_001405446.1| - 0.0012 18.4 1.4 0.54 9.9 0.1 2.2 2 0 0 2 2 2 2 Nudix N-terminal zf-NADH-PPase PF09297.6 gi|154151828|ref|YP_001405446.1| - 0.83 9.2 4.4 12 5.5 3.5 2.1 1 1 1 2 2 2 0 NADH pyrophosphatase zinc ribbon domain NOB1_Zn_bind PF08772.6 gi|154151828|ref|YP_001405446.1| - 2.5 7.9 7.6 5.2 6.9 0.9 2.3 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like PQ-loop PF04193.9 gi|154151829|ref|YP_001405447.1| - 5e-12 45.1 0.8 5e-12 45.1 0.6 1.5 2 0 0 2 2 2 1 PQ loop repeat MtN3_slv PF03083.11 gi|154151829|ref|YP_001405447.1| - 8.2e-05 22.3 3.0 0.0002 21.1 2.0 1.6 1 1 1 2 2 2 1 Sugar efflux transporter for intercellular exchange DUF1129 PF06570.6 gi|154151829|ref|YP_001405447.1| - 0.0093 15.3 0.8 0.011 15.0 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1129) Asp-Al_Ex PF06826.7 gi|154151829|ref|YP_001405447.1| - 0.023 14.1 0.0 0.023 14.1 0.0 1.4 2 0 0 2 2 2 0 Predicted Permease Membrane Region LAB_N PF07578.6 gi|154151829|ref|YP_001405447.1| - 0.029 14.3 2.0 0.037 13.9 1.4 1.1 1 0 0 1 1 1 0 Lipid A Biosynthesis N-terminal domain Methyltransf_31 PF13847.1 gi|154151830|ref|YP_001405448.1| - 1e-23 83.6 0.0 1.9e-23 82.7 0.0 1.4 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|154151830|ref|YP_001405448.1| - 7.3e-21 74.4 0.0 3.9e-19 68.9 0.0 2.3 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|154151830|ref|YP_001405448.1| - 6e-16 58.7 0.0 3.5e-15 56.2 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|154151830|ref|YP_001405448.1| - 1.9e-15 57.4 0.0 9.3e-15 55.1 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|154151830|ref|YP_001405448.1| - 1e-14 54.2 0.0 2e-14 53.2 0.0 1.4 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.1 gi|154151830|ref|YP_001405448.1| - 7.2e-14 51.8 0.0 1.8e-13 50.4 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|154151830|ref|YP_001405448.1| - 4.7e-12 46.1 0.0 5.7e-11 42.6 0.0 2.4 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|154151830|ref|YP_001405448.1| - 1.7e-09 37.6 0.2 5e-08 32.9 0.1 2.4 2 1 0 2 2 2 1 Methyltransferase domain MTS PF05175.9 gi|154151830|ref|YP_001405448.1| - 1.5e-08 34.1 0.0 2.5e-08 33.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_4 PF02390.12 gi|154151830|ref|YP_001405448.1| - 3e-07 29.6 0.0 4.1e-07 29.2 0.0 1.1 1 0 0 1 1 1 1 Putative methyltransferase PCMT PF01135.14 gi|154151830|ref|YP_001405448.1| - 1.6e-06 27.8 0.0 2.2e-06 27.3 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) NodS PF05401.6 gi|154151830|ref|YP_001405448.1| - 0.00032 20.1 0.0 0.0005 19.5 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) CMAS PF02353.15 gi|154151830|ref|YP_001405448.1| - 0.003 16.6 0.0 0.0038 16.3 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase TPMT PF05724.6 gi|154151830|ref|YP_001405448.1| - 0.0082 15.6 0.0 0.013 14.9 0.0 1.3 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) RrnaAD PF00398.15 gi|154151830|ref|YP_001405448.1| - 0.072 12.1 0.0 0.11 11.5 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase GCD14 PF08704.5 gi|154151830|ref|YP_001405448.1| - 0.076 12.5 0.0 0.11 11.9 0.0 1.2 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit DUF457 PF04307.9 gi|154151831|ref|YP_001405449.1| - 1.6e-12 47.0 21.3 2.6e-12 46.3 14.7 1.4 1 0 0 1 1 1 1 Predicted membrane-bound metal-dependent hydrolase (DUF457) SRP72 PF08492.7 gi|154151831|ref|YP_001405449.1| - 0.2 12.0 0.7 0.33 11.3 0.5 1.2 1 0 0 1 1 1 0 SRP72 RNA-binding domain GTP_EFTU PF00009.22 gi|154151833|ref|YP_001405451.1| - 6.9e-32 110.3 0.1 1.8e-31 109.0 0.0 1.7 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain IF-2 PF11987.3 gi|154151833|ref|YP_001405451.1| - 2.5e-20 72.3 0.1 7e-20 70.9 0.1 1.8 1 0 0 1 1 1 1 Translation-initiation factor 2 GTP_EFTU_D4 PF14578.1 gi|154151833|ref|YP_001405451.1| - 3.9e-11 42.4 0.4 1.2e-10 40.8 0.3 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 4 GTP_EFTU_D2 PF03144.20 gi|154151833|ref|YP_001405451.1| - 4.7e-11 42.6 4.3 1.1e-08 35.0 0.1 2.7 2 0 0 2 2 2 2 Elongation factor Tu domain 2 MMR_HSR1 PF01926.18 gi|154151833|ref|YP_001405451.1| - 2e-06 27.7 0.0 5.2e-06 26.4 0.0 1.8 1 0 0 1 1 1 1 50S ribosome-binding GTPase Miro PF08477.8 gi|154151833|ref|YP_001405451.1| - 0.0013 19.1 0.0 0.0037 17.7 0.0 1.8 1 0 0 1 1 1 1 Miro-like protein PduV-EutP PF10662.4 gi|154151833|ref|YP_001405451.1| - 0.0038 16.7 0.0 0.66 9.4 0.0 3.4 4 0 0 4 4 4 1 Ethanolamine utilisation - propanediol utilisation ATP_bind_1 PF03029.12 gi|154151833|ref|YP_001405451.1| - 0.0067 15.9 0.0 0.019 14.4 0.0 1.8 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein Dynamin_N PF00350.18 gi|154151833|ref|YP_001405451.1| - 0.0081 15.9 0.1 0.096 12.4 0.0 2.4 1 1 0 2 2 2 1 Dynamin family Ras PF00071.17 gi|154151833|ref|YP_001405451.1| - 0.074 12.4 0.0 0.17 11.2 0.0 1.7 1 1 0 1 1 1 0 Ras family Ribosomal_S6e PF01092.14 gi|154151834|ref|YP_001405452.1| - 2.4e-29 101.5 0.1 3e-29 101.2 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S6e Cyclase_polyket PF04673.7 gi|154151834|ref|YP_001405452.1| - 0.00073 19.5 0.0 0.001 19.0 0.0 1.2 1 0 0 1 1 1 1 Polyketide synthesis cyclase PYNP_C PF07831.8 gi|154151834|ref|YP_001405452.1| - 0.11 11.9 0.4 0.11 11.9 0.3 1.8 2 0 0 2 2 2 0 Pyrimidine nucleoside phosphorylase C-terminal domain Ribosomal_S6e PF01092.14 gi|154151835|ref|YP_001405453.1| - 2.3e-06 27.2 0.4 7.7e-06 25.5 0.0 1.8 1 1 1 2 2 2 1 Ribosomal protein S6e DUF3850 PF12961.2 gi|154151836|ref|YP_001405454.1| - 0.0018 18.1 0.1 0.0032 17.3 0.0 1.4 1 0 0 1 1 1 1 Domain of Unknown Function with PDB structure (DUF3850) ASCH PF04266.9 gi|154151836|ref|YP_001405454.1| - 0.018 15.4 0.0 0.021 15.1 0.0 1.2 1 0 0 1 1 1 0 ASCH domain TrfA PF07042.6 gi|154151836|ref|YP_001405454.1| - 0.027 13.3 0.0 0.034 12.9 0.0 1.1 1 0 0 1 1 1 0 TrfA protein PIN_3 PF13470.1 gi|154151837|ref|YP_001405455.1| - 0.12 13.0 0.1 0.25 12.0 0.0 1.6 1 0 0 1 1 1 0 PIN domain ASCH PF04266.9 gi|154151838|ref|YP_001405456.1| - 3.7e-06 27.2 0.0 4.2e-06 27.0 0.0 1.2 1 0 0 1 1 1 1 ASCH domain DUF3850 PF12961.2 gi|154151838|ref|YP_001405456.1| - 0.015 15.2 0.0 0.029 14.3 0.0 1.5 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3850) Acetyltransf_1 PF00583.19 gi|154151839|ref|YP_001405457.1| - 8.5e-05 22.5 0.0 0.00019 21.3 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family PCP_red PF08369.5 gi|154151839|ref|YP_001405457.1| - 0.0042 16.9 0.0 0.011 15.5 0.0 1.7 1 0 0 1 1 1 1 Proto-chlorophyllide reductase 57 kD subunit Acetyltransf_4 PF13420.1 gi|154151839|ref|YP_001405457.1| - 0.078 12.9 0.1 0.21 11.5 0.0 1.8 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.1 gi|154151839|ref|YP_001405457.1| - 0.089 12.9 0.0 0.24 11.5 0.0 1.8 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain HNH PF01844.18 gi|154151840|ref|YP_001405458.1| - 1.7e-07 30.9 0.7 1.7e-07 30.9 0.5 1.8 2 0 0 2 2 2 1 HNH endonuclease HNH_4 PF13395.1 gi|154151840|ref|YP_001405458.1| - 5.7e-05 22.6 0.0 0.00018 21.1 0.0 1.8 1 1 0 1 1 1 1 HNH endonuclease HNH_5 PF14279.1 gi|154151840|ref|YP_001405458.1| - 0.0064 16.4 0.5 0.013 15.4 0.3 1.5 1 0 0 1 1 1 1 HNH endonuclease PIN PF01850.16 gi|154151841|ref|YP_001405459.1| - 1.6e-06 28.4 0.1 9.1e-06 26.0 0.0 2.1 2 1 0 2 2 2 1 PIN domain PIN_3 PF13470.1 gi|154151841|ref|YP_001405459.1| - 0.0029 18.2 0.4 0.21 12.2 0.3 2.4 1 1 0 1 1 1 1 PIN domain STAS PF01740.16 gi|154151842|ref|YP_001405460.1| - 8.6e-11 41.2 0.0 9.8e-11 41.1 0.0 1.0 1 0 0 1 1 1 1 STAS domain STAS_2 PF13466.1 gi|154151842|ref|YP_001405460.1| - 2e-08 34.1 0.0 2.5e-08 33.8 0.0 1.1 1 0 0 1 1 1 1 STAS domain DUF4251 PF14059.1 gi|154151843|ref|YP_001405461.1| - 0.002 17.9 1.3 0.0025 17.6 0.9 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4251) DUF2240 PF09999.4 gi|154151844|ref|YP_001405462.1| - 1e-48 164.4 0.0 1.1e-48 164.2 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2240) Ribosomal_S8e PF01201.17 gi|154151846|ref|YP_001405464.1| - 2.3e-38 131.3 1.7 2.5e-38 131.1 1.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S8e cobW PF02492.14 gi|154151847|ref|YP_001405465.1| - 1.7e-33 115.5 0.0 2.1e-33 115.2 0.0 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain ArgK PF03308.11 gi|154151847|ref|YP_001405465.1| - 1.3e-06 27.3 0.1 0.021 13.6 0.0 2.2 2 0 0 2 2 2 2 ArgK protein MobB PF03205.9 gi|154151847|ref|YP_001405465.1| - 4.7e-05 23.1 0.0 0.00011 21.9 0.0 1.6 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B SRP54 PF00448.17 gi|154151847|ref|YP_001405465.1| - 0.0026 17.2 0.0 0.0049 16.3 0.0 1.6 1 1 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_16 PF13191.1 gi|154151847|ref|YP_001405465.1| - 0.0035 17.3 0.0 0.0052 16.7 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain PduV-EutP PF10662.4 gi|154151847|ref|YP_001405465.1| - 0.0069 15.8 0.0 1.8 8.0 0.0 2.2 2 0 0 2 2 2 2 Ethanolamine utilisation - propanediol utilisation GTP_EFTU PF00009.22 gi|154151847|ref|YP_001405465.1| - 0.0078 15.6 0.0 1.5 8.2 0.0 2.3 2 0 0 2 2 2 2 Elongation factor Tu GTP binding domain TrwB_AAD_bind PF10412.4 gi|154151847|ref|YP_001405465.1| - 0.049 12.2 0.0 0.07 11.7 0.0 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain NACHT PF05729.7 gi|154151847|ref|YP_001405465.1| - 0.06 12.9 0.0 0.1 12.2 0.0 1.3 1 0 0 1 1 1 0 NACHT domain LpxK PF02606.9 gi|154151847|ref|YP_001405465.1| - 0.085 11.7 0.0 0.12 11.3 0.0 1.2 1 0 0 1 1 1 0 Tetraacyldisaccharide-1-P 4'-kinase SRP19 PF01922.12 gi|154151848|ref|YP_001405466.1| - 1.2e-21 77.0 0.1 1.4e-21 76.8 0.1 1.0 1 0 0 1 1 1 1 SRP19 protein APP_E2 PF12925.2 gi|154151848|ref|YP_001405466.1| - 0.036 13.6 0.1 0.071 12.6 0.1 1.5 1 1 0 1 1 1 0 E2 domain of amyloid precursor protein PHP PF02811.14 gi|154151849|ref|YP_001405467.1| - 2.9e-11 43.4 0.1 2.8e-10 40.2 0.0 1.9 1 1 0 1 1 1 1 PHP domain RNase_P_p30 PF01876.11 gi|154151849|ref|YP_001405467.1| - 0.00049 19.3 0.0 0.011 15.0 0.0 2.5 2 1 0 2 2 2 1 RNase P subunit p30 PGA_cap PF09587.5 gi|154151849|ref|YP_001405467.1| - 0.014 14.8 0.4 0.028 13.7 0.1 1.6 2 0 0 2 2 2 0 Bacterial capsule synthesis protein PGA_cap Peroxidase_2 PF01328.12 gi|154151849|ref|YP_001405467.1| - 0.037 12.6 0.2 0.06 11.9 0.1 1.4 2 0 0 2 2 2 0 Peroxidase, family 2 TFIIB PF00382.14 gi|154151850|ref|YP_001405468.1| - 1.2e-45 153.1 1.4 3.5e-24 84.4 0.3 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.7 gi|154151850|ref|YP_001405468.1| - 7e-19 66.8 0.6 1.8e-18 65.5 0.4 1.7 1 0 0 1 1 1 1 TFIIB zinc-binding Sigma70_r4 PF04545.11 gi|154151850|ref|YP_001405468.1| - 7.9e-06 25.0 0.9 0.0031 16.7 0.2 3.3 2 0 0 2 2 2 1 Sigma-70, region 4 OrfB_Zn_ribbon PF07282.6 gi|154151850|ref|YP_001405468.1| - 0.00036 20.1 0.6 0.00079 19.0 0.4 1.5 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HTH_AsnC-type PF13404.1 gi|154151850|ref|YP_001405468.1| - 0.0063 16.0 1.3 0.034 13.6 0.1 2.8 2 1 0 2 2 2 1 AsnC-type helix-turn-helix domain zf-ribbon_3 PF13248.1 gi|154151850|ref|YP_001405468.1| - 0.014 14.5 0.1 0.014 14.5 0.1 1.9 2 0 0 2 2 1 0 zinc-ribbon domain HTH_24 PF13412.1 gi|154151850|ref|YP_001405468.1| - 0.015 14.6 0.2 0.11 11.8 0.1 2.4 2 1 0 2 2 2 0 Winged helix-turn-helix DNA-binding Ribosomal_S27e PF01667.12 gi|154151850|ref|YP_001405468.1| - 0.023 14.2 0.4 0.023 14.2 0.3 1.8 2 0 0 2 2 2 0 Ribosomal protein S27 HTH_3 PF01381.17 gi|154151850|ref|YP_001405468.1| - 0.033 14.0 0.4 1.7 8.5 0.0 3.5 3 1 1 4 4 4 0 Helix-turn-helix DZR PF12773.2 gi|154151850|ref|YP_001405468.1| - 0.048 13.4 1.2 0.19 11.5 0.2 2.2 2 0 0 2 2 2 0 Double zinc ribbon HTH_31 PF13560.1 gi|154151850|ref|YP_001405468.1| - 0.068 13.3 4.3 2.3 8.5 0.1 3.7 3 1 0 3 3 3 0 Helix-turn-helix domain Sigma70_r4_2 PF08281.7 gi|154151850|ref|YP_001405468.1| - 0.077 12.4 0.7 0.61 9.5 0.1 2.7 2 2 0 2 2 2 0 Sigma-70, region 4 UPF0253 PF06786.7 gi|154151850|ref|YP_001405468.1| - 0.082 13.0 0.7 0.76 9.9 0.1 2.4 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0253) A2L_zn_ribbon PF08792.5 gi|154151850|ref|YP_001405468.1| - 0.091 12.2 1.6 0.38 10.2 1.1 2.0 1 1 0 1 1 1 0 A2L zinc ribbon domain Cyclin_C PF02984.14 gi|154151850|ref|YP_001405468.1| - 0.14 12.1 0.0 14 5.6 0.0 2.5 2 0 0 2 2 2 0 Cyclin, C-terminal domain Lar_restr_allev PF14354.1 gi|154151850|ref|YP_001405468.1| - 0.15 12.4 1.0 0.95 9.8 0.3 2.3 2 0 0 2 2 2 0 Restriction alleviation protein Lar Elf1 PF05129.8 gi|154151850|ref|YP_001405468.1| - 0.35 10.6 2.1 0.55 9.9 0.4 2.0 2 0 0 2 2 2 0 Transcription elongation factor Elf1 like zf-CHY PF05495.7 gi|154151850|ref|YP_001405468.1| - 0.54 10.4 2.6 0.83 9.8 0.8 1.9 2 0 0 2 2 2 0 CHY zinc finger Zn-ribbon_8 PF09723.5 gi|154151850|ref|YP_001405468.1| - 2.5 8.1 7.2 0.63 10.0 0.3 2.8 2 1 1 3 3 3 0 Zinc ribbon domain zf-NADH-PPase PF09297.6 gi|154151850|ref|YP_001405468.1| - 2.7 7.5 6.1 0.26 10.8 0.4 2.3 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain zf-C4pol PF14260.1 gi|154151850|ref|YP_001405468.1| - 2.8 8.0 5.9 23 5.0 1.8 3.1 2 1 1 3 3 3 0 C4-type zinc-finger of DNA polymerase delta HTH_23 PF13384.1 gi|154151850|ref|YP_001405468.1| - 6.2 6.6 7.7 1 9.1 0.1 3.4 3 1 0 3 3 3 0 Homeodomain-like domain TrmB PF01978.14 gi|154151851|ref|YP_001405469.1| - 1.7e-16 59.6 0.0 5.9e-16 57.9 0.0 1.9 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB GntR PF00392.16 gi|154151851|ref|YP_001405469.1| - 0.022 14.1 0.0 0.051 13.0 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_24 PF13412.1 gi|154151851|ref|YP_001405469.1| - 0.037 13.4 0.0 0.068 12.5 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding DUF3731 PF12531.3 gi|154151851|ref|YP_001405469.1| - 0.072 12.6 0.0 0.13 11.8 0.0 1.3 1 0 0 1 1 1 0 DNA-K related protein HTH_Crp_2 PF13545.1 gi|154151851|ref|YP_001405469.1| - 0.075 12.8 0.0 0.17 11.7 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain MarR PF01047.17 gi|154151851|ref|YP_001405469.1| - 0.14 11.9 0.1 1.6 8.5 0.0 2.3 2 0 0 2 2 2 0 MarR family SnoaL PF07366.7 gi|154151852|ref|YP_001405470.1| - 4e-33 113.6 0.1 4.5e-33 113.5 0.1 1.0 1 0 0 1 1 1 1 SnoaL-like polyketide cyclase SnoaL_2 PF12680.2 gi|154151852|ref|YP_001405470.1| - 2.4e-12 47.1 0.3 2.9e-12 46.8 0.2 1.1 1 0 0 1 1 1 1 SnoaL-like domain DUF4440 PF14534.1 gi|154151852|ref|YP_001405470.1| - 0.00023 21.3 0.3 0.00028 21.0 0.2 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4440) zf-CDGSH PF09360.5 gi|154151853|ref|YP_001405471.1| - 8.7e-34 115.0 5.1 3.6e-17 61.8 0.8 2.5 2 0 0 2 2 2 2 Iron-binding zinc finger CDGSH type Fer4_19 PF06902.6 gi|154151853|ref|YP_001405471.1| - 2.4e-13 49.6 0.0 6.2e-13 48.3 0.0 1.7 1 0 0 1 1 1 1 Divergent 4Fe-4S mono-cluster Rieske PF00355.21 gi|154151854|ref|YP_001405472.1| - 5.8e-15 54.6 0.0 6.9e-15 54.4 0.0 1.2 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.1 gi|154151854|ref|YP_001405472.1| - 7.5e-12 44.8 0.0 1.1e-11 44.4 0.0 1.2 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain UPF0150 PF03681.10 gi|154151855|ref|YP_001405473.1| - 0.05 13.2 0.0 0.071 12.7 0.0 1.3 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0150) DUF2443 PF10398.4 gi|154151855|ref|YP_001405473.1| - 0.11 12.2 0.1 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2443) DUF1890 PF09001.6 gi|154151855|ref|YP_001405473.1| - 0.13 12.2 0.3 0.14 12.1 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1890) PEGA PF08308.6 gi|154151856|ref|YP_001405474.1| - 8e-19 67.2 0.5 1.8e-18 66.0 0.3 1.7 1 0 0 1 1 1 1 PEGA domain DUF726 PF05277.7 gi|154151856|ref|YP_001405474.1| - 1.4 7.7 3.9 2.4 6.9 2.7 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF726) DUF4134 PF13572.1 gi|154151856|ref|YP_001405474.1| - 6.2 7.0 6.1 2.9 8.0 0.6 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF4134) DUF2281 PF10047.4 gi|154151857|ref|YP_001405475.1| - 4.6e-05 23.6 0.1 0.00012 22.2 0.0 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF2281) AIRS PF00586.19 gi|154151858|ref|YP_001405476.1| - 1.5e-19 69.9 0.5 2.8e-19 69.1 0.4 1.4 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.17 gi|154151858|ref|YP_001405476.1| - 0.016 15.2 0.0 0.098 12.6 0.0 2.0 1 1 0 1 1 1 0 AIR synthase related protein, C-terminal domain DUF460 PF04312.8 gi|154151859|ref|YP_001405477.1| - 2.3e-48 163.2 0.0 4.5e-48 162.2 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF460) DUF641 PF04859.7 gi|154151859|ref|YP_001405477.1| - 0.025 14.3 2.4 0.16 11.6 0.1 2.5 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) Cast PF10174.4 gi|154151859|ref|YP_001405477.1| - 0.76 7.7 9.8 0.011 13.8 1.9 1.4 2 0 0 2 2 2 0 RIM-binding protein of the cytomatrix active zone RIO1 PF01163.17 gi|154151860|ref|YP_001405478.1| - 9.3e-40 135.9 0.0 1.4e-39 135.4 0.0 1.1 1 0 0 1 1 1 1 RIO1 family Rio2_N PF09202.6 gi|154151860|ref|YP_001405478.1| - 9.1e-24 83.3 0.2 1.7e-23 82.4 0.0 1.5 2 0 0 2 2 2 1 Rio2, N-terminal APH PF01636.18 gi|154151860|ref|YP_001405478.1| - 4.3e-05 23.3 0.7 0.00015 21.5 0.5 2.1 1 1 0 1 1 1 1 Phosphotransferase enzyme family PCI PF01399.22 gi|154151860|ref|YP_001405478.1| - 0.0014 18.9 0.0 0.0029 17.8 0.0 1.5 1 0 0 1 1 1 1 PCI domain HTH_IclR PF09339.5 gi|154151860|ref|YP_001405478.1| - 0.0064 16.0 0.0 0.013 15.0 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain Pkinase PF00069.20 gi|154151860|ref|YP_001405478.1| - 0.016 14.3 0.0 0.039 13.0 0.0 1.6 1 1 0 1 1 1 0 Protein kinase domain MarR_2 PF12802.2 gi|154151860|ref|YP_001405478.1| - 0.02 14.5 0.0 0.049 13.2 0.0 1.7 1 0 0 1 1 1 0 MarR family HTH_9 PF08221.6 gi|154151860|ref|YP_001405478.1| - 0.031 14.1 0.0 0.067 13.0 0.0 1.5 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_24 PF13412.1 gi|154151860|ref|YP_001405478.1| - 0.036 13.4 0.0 0.11 11.9 0.0 1.8 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding ATP_bind_3 PF01171.15 gi|154151861|ref|YP_001405479.1| - 8.7e-07 28.6 0.0 1.3e-06 28.0 0.0 1.2 1 0 0 1 1 1 1 PP-loop family Zn-ribbon_8 PF09723.5 gi|154151861|ref|YP_001405479.1| - 3.9 7.4 9.3 2.6 8.0 0.3 3.1 2 1 1 3 3 3 0 Zinc ribbon domain Auto_anti-p27 PF06677.7 gi|154151861|ref|YP_001405479.1| - 6.8 6.5 10.2 0.26 11.1 0.2 2.7 3 0 0 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) TrkA_N PF02254.13 gi|154151862|ref|YP_001405480.1| - 1.9e-37 127.7 4.1 6.2e-22 77.7 0.7 2.7 3 0 0 3 3 3 2 TrkA-N domain TrkA_C PF02080.16 gi|154151862|ref|YP_001405480.1| - 1.6e-11 43.6 0.1 0.00015 21.2 0.0 2.8 2 0 0 2 2 2 2 TrkA-C domain NAD_binding_7 PF13241.1 gi|154151862|ref|YP_001405480.1| - 3.5e-08 33.6 0.7 0.0098 16.1 0.0 2.4 2 0 0 2 2 2 2 Putative NAD(P)-binding Shikimate_DH PF01488.15 gi|154151862|ref|YP_001405480.1| - 0.0085 16.1 0.2 0.02 15.0 0.0 1.6 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase EAV_GS PF01309.13 gi|154151862|ref|YP_001405480.1| - 0.009 15.5 0.5 0.017 14.6 0.4 1.4 1 0 0 1 1 1 1 Equine arteritis virus small envelope glycoprotein Ion_trans_2 PF07885.11 gi|154151862|ref|YP_001405480.1| - 0.027 14.1 9.0 0.07 12.8 6.2 1.6 1 0 0 1 1 1 0 Ion channel ELFV_dehydrog PF00208.16 gi|154151862|ref|YP_001405480.1| - 0.054 13.0 0.1 0.1 12.1 0.1 1.4 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NAD_synthase PF02540.12 gi|154151863|ref|YP_001405481.1| - 6.6e-71 238.0 0.0 8.5e-71 237.6 0.0 1.0 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.11 gi|154151863|ref|YP_001405481.1| - 7.4e-05 21.4 0.1 0.00071 18.2 0.0 2.1 2 0 0 2 2 2 1 tRNA methyl transferase Asn_synthase PF00733.16 gi|154151863|ref|YP_001405481.1| - 0.0021 17.5 0.0 0.003 17.1 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase QueC PF06508.8 gi|154151863|ref|YP_001405481.1| - 0.025 13.8 0.0 0.26 10.5 0.0 2.0 2 0 0 2 2 2 0 Queuosine biosynthesis protein QueC GPI PF06560.6 gi|154151864|ref|YP_001405482.1| - 9.4e-40 135.5 0.0 1.2e-39 135.2 0.0 1.1 1 0 0 1 1 1 1 Glucose-6-phosphate isomerase (GPI) CARDB PF07705.6 gi|154151865|ref|YP_001405483.1| - 9.1e-07 28.8 12.3 0.042 13.8 0.4 3.9 3 1 0 3 3 3 3 CARDB NPCBM_assoc PF10633.4 gi|154151865|ref|YP_001405483.1| - 9.3e-06 25.6 20.2 0.0021 18.0 1.3 5.5 6 1 0 6 6 6 3 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF11 PF01345.13 gi|154151865|ref|YP_001405483.1| - 3.1 7.8 25.2 6.1 6.9 0.1 4.7 4 1 0 4 4 4 0 Domain of unknown function DUF11 DUF128 PF01995.11 gi|154151866|ref|YP_001405484.1| - 3.6e-86 287.9 0.3 4.1e-86 287.7 0.2 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF128 Pyr_redox_2 PF07992.9 gi|154151868|ref|YP_001405486.1| - 1.1e-31 110.3 8.6 7.5e-31 107.5 6.0 2.8 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.22 gi|154151868|ref|YP_001405486.1| - 1.3e-14 54.2 3.9 2.4e-10 40.6 0.3 3.5 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.1 gi|154151868|ref|YP_001405486.1| - 1.6e-10 41.3 0.0 3.1e-08 33.9 0.0 2.9 2 1 1 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.2 gi|154151868|ref|YP_001405486.1| - 2.6e-07 30.1 0.2 4.6e-07 29.2 0.2 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.19 gi|154151868|ref|YP_001405486.1| - 2.6e-06 26.5 9.1 0.0014 17.5 0.6 3.1 2 1 1 3 3 3 3 FAD binding domain Pyr_redox_dim PF02852.17 gi|154151868|ref|YP_001405486.1| - 9.5e-06 25.6 0.0 4.2e-05 23.5 0.0 2.1 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GIDA PF01134.17 gi|154151868|ref|YP_001405486.1| - 1.6e-05 23.9 0.9 0.002 17.0 0.9 2.7 2 1 0 2 2 2 1 Glucose inhibited division protein A NAD_binding_7 PF13241.1 gi|154151868|ref|YP_001405486.1| - 5.4e-05 23.3 0.2 0.36 11.1 0.0 2.3 2 0 0 2 2 2 2 Putative NAD(P)-binding HI0933_like PF03486.9 gi|154151868|ref|YP_001405486.1| - 0.00011 20.8 2.8 0.00079 18.0 0.5 2.7 3 0 0 3 3 3 1 HI0933-like protein NAD_binding_8 PF13450.1 gi|154151868|ref|YP_001405486.1| - 0.00049 20.0 3.1 0.0045 16.9 0.1 3.4 4 0 0 4 4 4 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.14 gi|154151868|ref|YP_001405486.1| - 0.0024 16.9 1.5 0.057 12.4 0.5 2.4 2 0 0 2 2 2 1 FAD binding domain 3HCDH_N PF02737.13 gi|154151868|ref|YP_001405486.1| - 0.021 14.4 3.9 0.35 10.5 0.2 2.2 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K_oxygenase PF13434.1 gi|154151868|ref|YP_001405486.1| - 0.029 13.3 0.0 0.36 9.6 0.0 2.0 1 1 1 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) DAO PF01266.19 gi|154151868|ref|YP_001405486.1| - 0.043 12.7 14.3 0.11 11.3 0.4 3.4 3 1 1 4 4 4 0 FAD dependent oxidoreductase Trp_halogenase PF04820.9 gi|154151868|ref|YP_001405486.1| - 0.075 11.6 0.9 0.17 10.4 0.3 1.8 2 0 0 2 2 2 0 Tryptophan halogenase ApbA PF02558.11 gi|154151868|ref|YP_001405486.1| - 0.2 11.0 0.9 1.7 8.0 0.1 2.2 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA tRNA-synt_2 PF00152.15 gi|154151870|ref|YP_001405488.1| - 4.2e-99 331.4 3.2 5.3e-99 331.1 2.2 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.20 gi|154151870|ref|YP_001405488.1| - 1.7e-14 53.4 0.3 3.3e-14 52.4 0.2 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.15 gi|154151870|ref|YP_001405488.1| - 9.7e-08 31.5 1.6 0.00011 21.4 0.2 2.5 2 1 0 2 2 2 2 tRNA synthetases class II core domain (F) YjbR PF04237.8 gi|154151871|ref|YP_001405489.1| - 6.7e-05 23.1 0.0 0.00019 21.7 0.0 1.7 1 1 0 1 1 1 1 YjbR TfoX_N PF04993.8 gi|154151871|ref|YP_001405489.1| - 0.00079 19.2 0.0 0.00096 18.9 0.0 1.1 1 0 0 1 1 1 1 TfoX N-terminal domain KTSC PF13619.1 gi|154151873|ref|YP_001405491.1| - 0.002 17.6 0.1 0.0026 17.3 0.1 1.2 1 0 0 1 1 1 1 KTSC domain Flavodoxin_3 PF12641.2 gi|154151874|ref|YP_001405492.1| - 2e-07 30.6 0.0 2.2e-07 30.4 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_5 PF12724.2 gi|154151874|ref|YP_001405492.1| - 0.00024 21.1 0.0 0.00031 20.7 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin domain Flavodoxin_4 PF12682.2 gi|154151874|ref|YP_001405492.1| - 0.027 13.8 0.0 0.37 10.1 0.0 2.0 1 1 1 2 2 2 0 Flavodoxin DUF3186 PF11382.3 gi|154151874|ref|YP_001405492.1| - 0.066 12.3 0.0 0.12 11.4 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3186) Response_reg PF00072.19 gi|154151875|ref|YP_001405493.1| - 6.5e-21 74.4 0.3 1.4e-20 73.3 0.2 1.6 1 0 0 1 1 1 1 Response regulator receiver domain Hemerythrin PF01814.18 gi|154151875|ref|YP_001405493.1| - 0.002 18.2 0.9 0.13 12.4 0.6 2.5 1 1 0 1 1 1 1 Hemerythrin HHE cation binding domain EzrA PF06160.7 gi|154151875|ref|YP_001405493.1| - 0.0041 15.3 13.6 0.034 12.3 2.6 2.0 1 1 1 2 2 2 2 Septation ring formation regulator, EzrA TPR_MLP1_2 PF07926.7 gi|154151875|ref|YP_001405493.1| - 0.0093 15.7 15.7 0.37 10.5 1.1 2.6 1 1 1 2 2 2 2 TPR/MLP1/MLP2-like protein DUF2031 PF09592.5 gi|154151875|ref|YP_001405493.1| - 0.02 14.0 0.7 0.02 14.0 0.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2031) IFT20 PF14931.1 gi|154151875|ref|YP_001405493.1| - 0.024 14.5 0.7 0.024 14.5 0.5 2.6 2 1 0 2 2 2 0 Intraflagellar transport complex B, subunit 20 WEMBL PF05701.6 gi|154151875|ref|YP_001405493.1| - 0.029 12.8 12.0 0.074 11.5 8.3 1.5 1 1 0 1 1 1 0 Weak chloroplast movement under blue light OspD PF03207.8 gi|154151875|ref|YP_001405493.1| - 0.031 13.4 1.4 0.067 12.3 0.9 1.6 1 1 0 1 1 1 0 Borrelia outer surface protein D (OspD) CALCOCO1 PF07888.6 gi|154151875|ref|YP_001405493.1| - 0.033 12.4 11.0 0.05 11.8 7.6 1.2 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like Mito_fiss_reg PF05308.6 gi|154151875|ref|YP_001405493.1| - 0.059 12.7 2.1 0.087 12.1 1.4 1.2 1 0 0 1 1 1 0 Mitochondrial fission regulator Fib_alpha PF08702.5 gi|154151875|ref|YP_001405493.1| - 0.063 13.4 11.9 0.6 10.2 3.4 2.3 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Cluap1 PF10234.4 gi|154151875|ref|YP_001405493.1| - 0.069 12.3 6.0 0.1 11.8 4.2 1.2 1 0 0 1 1 1 0 Clusterin-associated protein-1 Reo_sigmaC PF04582.7 gi|154151875|ref|YP_001405493.1| - 0.073 12.2 0.1 0.13 11.4 0.1 1.4 1 0 0 1 1 1 0 Reovirus sigma C capsid protein DUF848 PF05852.6 gi|154151875|ref|YP_001405493.1| - 0.084 12.7 14.2 0.034 14.0 2.3 2.6 2 1 1 3 3 2 0 Gammaherpesvirus protein of unknown function (DUF848) GAS PF13851.1 gi|154151875|ref|YP_001405493.1| - 0.11 11.6 17.0 0.8 8.8 5.8 2.3 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding DUF484 PF04340.7 gi|154151875|ref|YP_001405493.1| - 0.15 11.5 5.6 0.53 9.7 1.7 2.3 1 1 1 2 2 2 0 Protein of unknown function, DUF484 COG4 PF08318.7 gi|154151875|ref|YP_001405493.1| - 0.2 10.4 3.4 0.32 9.7 2.4 1.2 1 0 0 1 1 1 0 COG4 transport protein Transposase_24 PF03004.9 gi|154151875|ref|YP_001405493.1| - 0.21 11.4 1.7 0.73 9.7 1.1 2.1 1 1 1 2 2 2 0 Plant transposase (Ptta/En/Spm family) BRE1 PF08647.6 gi|154151875|ref|YP_001405493.1| - 0.31 11.0 14.5 0.089 12.7 4.3 2.4 1 1 0 2 2 2 0 BRE1 E3 ubiquitin ligase DUF4239 PF14023.1 gi|154151875|ref|YP_001405493.1| - 0.4 10.0 3.2 0.57 9.5 0.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF4239) CorA PF01544.13 gi|154151875|ref|YP_001405493.1| - 0.52 9.2 12.2 0.11 11.5 4.7 2.1 1 1 1 2 2 2 0 CorA-like Mg2+ transporter protein FlaC_arch PF05377.6 gi|154151875|ref|YP_001405493.1| - 0.78 9.6 8.2 9 6.2 0.1 4.1 3 2 2 5 5 4 0 Flagella accessory protein C (FlaC) IFT57 PF10498.4 gi|154151875|ref|YP_001405493.1| - 0.85 8.2 11.9 9.4 4.8 8.7 1.9 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 ADIP PF11559.3 gi|154151875|ref|YP_001405493.1| - 0.85 9.5 20.3 2.4 8.0 6.0 2.5 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding HALZ PF02183.13 gi|154151875|ref|YP_001405493.1| - 0.85 9.3 9.7 6.9 6.4 0.2 3.7 3 1 0 3 3 3 0 Homeobox associated leucine zipper SpaB_C PF14028.1 gi|154151875|ref|YP_001405493.1| - 0.95 8.9 5.0 4.9 6.6 0.6 2.1 1 1 1 2 2 2 0 SpaB C-terminal domain IncA PF04156.9 gi|154151875|ref|YP_001405493.1| - 1.1 8.8 19.7 4.2e+02 0.3 15.4 2.1 1 1 0 1 1 1 0 IncA protein DUF4446 PF14584.1 gi|154151875|ref|YP_001405493.1| - 1.1 9.0 10.2 2.9 7.7 0.8 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) Macoilin PF09726.4 gi|154151875|ref|YP_001405493.1| - 1.3 7.2 14.7 3.6 5.7 3.8 2.1 1 1 1 2 2 2 0 Transmembrane protein APG6 PF04111.7 gi|154151875|ref|YP_001405493.1| - 1.4 7.8 17.5 1.9 7.4 3.9 1.9 1 1 1 2 2 2 0 Autophagy protein Apg6 V_ATPase_I PF01496.14 gi|154151875|ref|YP_001405493.1| - 1.5 6.5 5.9 2 6.1 4.1 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF972 PF06156.8 gi|154151875|ref|YP_001405493.1| - 1.9 8.8 14.1 4.8 7.5 3.4 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF972) Spc7 PF08317.6 gi|154151875|ref|YP_001405493.1| - 2.1 6.9 13.3 16 3.9 9.4 2.0 1 1 0 1 1 1 0 Spc7 kinetochore protein CENP-F_leu_zip PF10473.4 gi|154151875|ref|YP_001405493.1| - 2.3 8.0 17.6 0.32 10.8 4.2 2.2 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Spc24 PF08286.6 gi|154151875|ref|YP_001405493.1| - 2.4 7.8 12.4 1.4 8.6 0.3 3.2 3 1 0 3 3 2 0 Spc24 subunit of Ndc80 DUF3450 PF11932.3 gi|154151875|ref|YP_001405493.1| - 2.7 7.1 13.7 0.11 11.8 2.4 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) ATG16 PF08614.6 gi|154151875|ref|YP_001405493.1| - 3.5 7.4 17.9 2.9 7.6 0.9 2.6 1 1 2 3 3 3 0 Autophagy protein 16 (ATG16) TMF_DNA_bd PF12329.3 gi|154151875|ref|YP_001405493.1| - 4.4 7.1 18.3 0.84 9.4 3.3 3.2 2 1 2 4 4 4 0 TATA element modulatory factor 1 DNA binding Nup54 PF13874.1 gi|154151875|ref|YP_001405493.1| - 5.1 6.7 10.7 0.98 9.0 0.5 2.5 1 1 1 2 2 2 0 Nucleoporin complex subunit 54 zf-C4H2 PF10146.4 gi|154151875|ref|YP_001405493.1| - 9 6.2 10.1 39 4.1 7.0 1.9 1 1 0 1 1 1 0 Zinc finger-containing protein N6_N4_Mtase PF01555.13 gi|154151876|ref|YP_001405494.1| - 3.9e-40 137.7 0.0 5.1e-40 137.4 0.0 1.1 1 0 0 1 1 1 1 DNA methylase Methyltransf_26 PF13659.1 gi|154151876|ref|YP_001405494.1| - 3.7e-16 59.2 0.0 7e-07 29.2 0.0 2.3 2 0 0 2 2 2 2 Methyltransferase domain UPF0020 PF01170.13 gi|154151876|ref|YP_001405494.1| - 1.8e-09 37.4 0.0 6.6e-06 25.8 0.0 2.2 2 0 0 2 2 2 2 Putative RNA methylase family UPF0020 Methyltransf_11 PF08241.7 gi|154151876|ref|YP_001405494.1| - 1.3e-06 28.7 0.0 0.027 14.9 0.0 3.2 2 1 0 2 2 2 2 Methyltransferase domain Methyltransf_31 PF13847.1 gi|154151876|ref|YP_001405494.1| - 0.00027 20.5 0.0 0.057 13.0 0.0 2.6 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|154151876|ref|YP_001405494.1| - 0.0069 16.9 0.0 5.7 7.5 0.0 2.3 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_25 PF13649.1 gi|154151876|ref|YP_001405494.1| - 0.0092 16.3 0.0 0.29 11.4 0.0 2.3 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_15 PF09445.5 gi|154151876|ref|YP_001405494.1| - 0.086 12.3 0.0 0.77 9.2 0.0 2.0 2 0 0 2 2 2 0 RNA cap guanine-N2 methyltransferase Met_10 PF02475.11 gi|154151876|ref|YP_001405494.1| - 0.14 11.7 0.0 0.47 10.0 0.0 1.8 2 0 0 2 2 2 0 Met-10+ like-protein XhoI PF04555.8 gi|154151877|ref|YP_001405495.1| - 1.9e-93 311.3 0.0 2.5e-93 310.9 0.0 1.0 1 0 0 1 1 1 1 Restriction endonuclease XhoI Methyltransf_11 PF08241.7 gi|154151878|ref|YP_001405496.1| - 4.2e-17 62.4 0.0 6.6e-17 61.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|154151878|ref|YP_001405496.1| - 1.7e-15 57.1 0.0 2.7e-15 56.4 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.2 gi|154151878|ref|YP_001405496.1| - 3.7e-15 56.4 0.0 5e-15 56.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|154151878|ref|YP_001405496.1| - 2.5e-13 49.9 0.0 3e-13 49.6 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.13 gi|154151878|ref|YP_001405496.1| - 3.6e-12 45.9 0.0 4.9e-12 45.4 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_25 PF13649.1 gi|154151878|ref|YP_001405496.1| - 2.1e-11 44.0 0.0 3.1e-11 43.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|154151878|ref|YP_001405496.1| - 3.5e-11 43.4 0.0 5e-11 42.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|154151878|ref|YP_001405496.1| - 1.2e-07 31.7 0.0 2.3e-07 30.8 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain PCMT PF01135.14 gi|154151878|ref|YP_001405496.1| - 4.6e-06 26.3 0.0 6.8e-06 25.7 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) FtsJ PF01728.14 gi|154151878|ref|YP_001405496.1| - 8.7e-05 22.5 0.0 0.00012 22.1 0.0 1.2 1 0 0 1 1 1 1 FtsJ-like methyltransferase RrnaAD PF00398.15 gi|154151878|ref|YP_001405496.1| - 0.00012 21.1 0.0 0.00018 20.6 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase CMAS PF02353.15 gi|154151878|ref|YP_001405496.1| - 0.00019 20.5 0.0 0.00023 20.3 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase MTS PF05175.9 gi|154151878|ref|YP_001405496.1| - 0.00021 20.7 0.0 0.00038 19.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.8 gi|154151878|ref|YP_001405496.1| - 0.03 13.4 0.0 0.042 12.9 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) FmrO PF07091.6 gi|154151878|ref|YP_001405496.1| - 0.038 12.9 0.0 0.044 12.7 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA methyltransferase (FmrO) Nol1_Nop2_Fmu PF01189.12 gi|154151878|ref|YP_001405496.1| - 0.049 12.9 0.0 0.076 12.3 0.0 1.3 1 0 0 1 1 1 0 NOL1/NOP2/sun family MetW PF07021.7 gi|154151878|ref|YP_001405496.1| - 0.062 12.6 0.0 0.089 12.1 0.0 1.4 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW Methyltransf_24 PF13578.1 gi|154151878|ref|YP_001405496.1| - 0.13 13.0 0.0 0.22 12.3 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain SPOUT_MTase PF02590.12 gi|154151879|ref|YP_001405497.1| - 3.9e-53 179.3 0.0 4.4e-53 179.1 0.0 1.0 1 0 0 1 1 1 1 Predicted SPOUT methyltransferase DUF2114 PF09887.4 gi|154151879|ref|YP_001405497.1| - 0.048 12.0 0.0 0.058 11.7 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2114) DUF3437 PF11919.3 gi|154151880|ref|YP_001405498.1| - 0.09 12.4 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3437) PGK PF00162.14 gi|154151881|ref|YP_001405499.1| - 1.5e-113 379.2 0.0 1.7e-113 379.1 0.0 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase ATP-synt_D PF01813.12 gi|154151882|ref|YP_001405500.1| - 3.3e-66 222.5 9.5 3.7e-66 222.4 6.6 1.0 1 0 0 1 1 1 1 ATP synthase subunit D DUF1322 PF07032.6 gi|154151882|ref|YP_001405500.1| - 0.071 13.3 0.1 0.17 12.0 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1322) MtrG PF04210.8 gi|154151882|ref|YP_001405500.1| - 0.71 9.5 4.3 1.6 8.4 0.2 2.6 2 1 1 3 3 3 0 Tetrahydromethanopterin S-methyltransferase, subunit G ATP-synt_ab PF00006.20 gi|154151883|ref|YP_001405501.1| - 1.6e-58 197.7 0.0 2.1e-58 197.3 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.22 gi|154151883|ref|YP_001405501.1| - 4.1e-16 59.4 0.0 6.6e-16 58.7 0.0 1.3 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain ATP-synt_ab_N PF02874.18 gi|154151883|ref|YP_001405501.1| - 1.3e-11 44.4 1.2 1.3e-11 44.4 0.8 1.9 2 0 0 2 2 2 1 ATP synthase alpha/beta family, beta-barrel domain HAS-barrel PF09378.5 gi|154151883|ref|YP_001405501.1| - 0.0015 18.3 0.8 0.0044 16.8 0.5 1.8 1 0 0 1 1 1 1 HAS barrel domain RVT_3 PF13456.1 gi|154151883|ref|YP_001405501.1| - 0.038 13.7 0.0 13 5.6 0.0 2.5 2 0 0 2 2 2 0 Reverse transcriptase-like ATP-synt_ab PF00006.20 gi|154151884|ref|YP_001405502.1| - 3.3e-98 327.4 0.0 6.8e-98 326.4 0.0 1.6 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.22 gi|154151884|ref|YP_001405502.1| - 1.1e-20 74.1 1.3 2.2e-20 73.2 0.9 1.5 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain ATP-synt_ab_N PF02874.18 gi|154151884|ref|YP_001405502.1| - 1.1e-12 47.9 1.2 3.6e-12 46.3 0.8 2.0 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain DUF1932 PF09130.6 gi|154151884|ref|YP_001405502.1| - 0.0091 15.7 1.0 1.6 8.4 0.2 2.9 2 0 0 2 2 2 1 Domain of unknown function (DUF1932) Peptidase_M23 PF01551.17 gi|154151884|ref|YP_001405502.1| - 0.018 15.0 0.7 1.7 8.7 0.0 2.7 2 1 0 2 2 2 0 Peptidase family M23 AAA_22 PF13401.1 gi|154151884|ref|YP_001405502.1| - 0.05 13.7 0.0 0.13 12.4 0.0 1.7 1 0 0 1 1 1 0 AAA domain RnfC_N PF13375.1 gi|154151884|ref|YP_001405502.1| - 0.1 12.3 1.3 0.35 10.6 0.1 2.3 2 0 0 2 2 2 0 RnfC Barrel sandwich hybrid domain ATP-synt_F PF01990.12 gi|154151885|ref|YP_001405503.1| - 1.8e-18 66.7 0.0 2.2e-18 66.4 0.0 1.0 1 0 0 1 1 1 1 ATP synthase (F/14-kDa) subunit DUF1152 PF06626.7 gi|154151885|ref|YP_001405503.1| - 0.012 14.6 0.0 0.014 14.4 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1152) vATP-synt_AC39 PF01992.11 gi|154151886|ref|YP_001405504.1| - 6.7e-68 229.2 1.3 7.5e-68 229.1 0.9 1.0 1 0 0 1 1 1 1 ATP synthase (C/AC39) subunit T2SM_b PF10741.4 gi|154151886|ref|YP_001405504.1| - 0.038 13.5 0.0 0.08 12.5 0.0 1.5 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein M subtype b vATP-synt_E PF01991.13 gi|154151887|ref|YP_001405505.1| - 1.2e-18 67.0 5.2 1.8e-18 66.5 3.6 1.2 1 0 0 1 1 1 1 ATP synthase (E/31 kDa) subunit DivIVA PF05103.8 gi|154151887|ref|YP_001405505.1| - 0.65 10.0 8.4 0.34 10.9 3.8 1.9 1 1 1 2 2 2 0 DivIVA protein AAA_13 PF13166.1 gi|154151887|ref|YP_001405505.1| - 3.4 6.0 7.2 4.2 5.7 5.0 1.0 1 0 0 1 1 1 0 AAA domain ATP-synt_C PF00137.16 gi|154151888|ref|YP_001405506.1| - 2.9e-17 62.2 15.1 3.4e-17 62.0 10.5 1.1 1 0 0 1 1 1 1 ATP synthase subunit C V_ATPase_I PF01496.14 gi|154151889|ref|YP_001405507.1| - 2.6e-90 303.3 15.1 3.4e-56 190.5 1.4 3.4 1 1 1 2 2 2 2 V-type ATPase 116kDa subunit family Peptidase_C39 PF03412.10 gi|154151889|ref|YP_001405507.1| - 0.0031 17.3 0.0 0.0064 16.2 0.0 1.4 1 0 0 1 1 1 1 Peptidase C39 family Prefoldin_2 PF01920.15 gi|154151889|ref|YP_001405507.1| - 0.014 15.1 6.1 0.22 11.2 1.8 2.4 2 0 0 2 2 2 0 Prefoldin subunit Mg-por_mtran_C PF07109.6 gi|154151889|ref|YP_001405507.1| - 0.036 14.0 0.0 0.096 12.7 0.0 1.8 1 0 0 1 1 1 0 Magnesium-protoporphyrin IX methyltransferase C-terminus bZIP_1 PF00170.16 gi|154151889|ref|YP_001405507.1| - 0.34 10.8 2.3 0.28 11.1 0.4 1.7 2 0 0 2 2 2 0 bZIP transcription factor Filament PF00038.16 gi|154151889|ref|YP_001405507.1| - 0.79 9.1 5.6 3.7 6.9 0.5 2.1 2 0 0 2 2 2 0 Intermediate filament protein BLOC1_2 PF10046.4 gi|154151889|ref|YP_001405507.1| - 2.5 8.2 4.8 1.7 8.7 1.4 2.0 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Seryl_tRNA_N PF02403.17 gi|154151889|ref|YP_001405507.1| - 5.7 6.9 8.7 6.6 6.8 2.0 2.3 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain DUF3552 PF12072.3 gi|154151890|ref|YP_001405508.1| - 0.0017 17.5 13.7 0.0017 17.5 9.5 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF3552) ATP-synt_B PF00430.13 gi|154151890|ref|YP_001405508.1| - 0.016 15.0 18.2 0.023 14.4 8.7 2.0 1 1 1 2 2 2 0 ATP synthase B/B' CF(0) Glyco_transf_56 PF07429.6 gi|154151890|ref|YP_001405508.1| - 0.074 11.9 0.6 0.082 11.8 0.4 1.0 1 0 0 1 1 1 0 4-alpha-L-fucosyltransferase glycosyl transferase group 56 P33MONOX PF15302.1 gi|154151890|ref|YP_001405508.1| - 0.13 11.8 3.0 0.14 11.7 2.0 1.1 1 0 0 1 1 1 0 P33 mono-oxygenase V-ATPase_G PF03179.10 gi|154151890|ref|YP_001405508.1| - 0.17 12.1 15.4 0.22 11.8 10.7 1.1 1 0 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit CENP-T PF15511.1 gi|154151890|ref|YP_001405508.1| - 0.21 10.7 3.6 0.25 10.5 2.5 1.0 1 0 0 1 1 1 0 Centromere kinetochore component CENP-T DivIVA PF05103.8 gi|154151890|ref|YP_001405508.1| - 0.91 9.5 15.0 4.3 7.3 10.4 1.9 1 1 0 1 1 1 0 DivIVA protein CCDC-167 PF15188.1 gi|154151890|ref|YP_001405508.1| - 0.99 9.3 6.9 4.3 7.3 2.9 2.3 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 167 FadA PF09403.5 gi|154151890|ref|YP_001405508.1| - 1.4 8.9 12.4 1.6 8.7 5.8 2.0 1 1 1 2 2 2 0 Adhesion protein FadA GBP_C PF02841.9 gi|154151890|ref|YP_001405508.1| - 2 7.5 13.0 2.2 7.3 9.0 1.0 1 0 0 1 1 1 0 Guanylate-binding protein, C-terminal domain DOR PF14839.1 gi|154151890|ref|YP_001405508.1| - 9.4 5.9 8.6 9.9 5.8 5.9 1.1 1 0 0 1 1 1 0 DOR family Zn-ribbon_8 PF09723.5 gi|154151892|ref|YP_001405510.1| - 0.00048 20.0 6.5 0.0019 18.1 4.5 1.8 1 1 0 1 1 1 1 Zinc ribbon domain HypA PF01155.14 gi|154151892|ref|YP_001405510.1| - 0.00059 19.4 0.3 0.0006 19.4 0.2 1.1 1 0 0 1 1 1 1 Hydrogenase expression/synthesis hypA family Zn_Tnp_IS1595 PF12760.2 gi|154151892|ref|YP_001405510.1| - 0.0015 18.2 0.9 1.3 8.9 0.0 2.1 2 0 0 2 2 2 2 Transposase zinc-ribbon domain DZR PF12773.2 gi|154151892|ref|YP_001405510.1| - 0.0029 17.3 0.5 0.0037 17.0 0.3 1.3 1 0 0 1 1 1 1 Double zinc ribbon FYDLN_acid PF09538.5 gi|154151892|ref|YP_001405510.1| - 0.0095 16.5 0.9 0.011 16.2 0.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (FYDLN_acid) zinc_ribbon_5 PF13719.1 gi|154151892|ref|YP_001405510.1| - 0.014 14.9 2.8 0.24 11.0 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_4 PF13717.1 gi|154151892|ref|YP_001405510.1| - 0.028 14.1 2.7 0.55 9.9 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zinc-ribbons_6 PF07191.7 gi|154151892|ref|YP_001405510.1| - 0.033 13.9 0.4 0.048 13.4 0.3 1.3 1 0 0 1 1 1 0 zinc-ribbons Prok-RING_1 PF14446.1 gi|154151892|ref|YP_001405510.1| - 0.037 13.7 0.8 0.056 13.1 0.6 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 Zn_Tnp_IS91 PF14319.1 gi|154151892|ref|YP_001405510.1| - 0.054 12.9 0.5 0.072 12.6 0.4 1.2 1 0 0 1 1 1 0 Transposase zinc-binding domain Zn_Tnp_IS1 PF03811.8 gi|154151892|ref|YP_001405510.1| - 0.06 12.8 5.4 0.72 9.3 0.5 2.3 2 0 0 2 2 2 0 InsA N-terminal domain TFIIS_C PF01096.13 gi|154151892|ref|YP_001405510.1| - 0.061 12.9 4.1 0.91 9.2 0.4 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) DUF3279 PF11682.3 gi|154151892|ref|YP_001405510.1| - 0.078 12.5 0.1 0.09 12.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3279) zf-RING_3 PF14369.1 gi|154151892|ref|YP_001405510.1| - 0.11 12.4 1.1 3.4 7.7 0.1 2.2 2 0 0 2 2 2 0 zinc-finger zf-ribbon_3 PF13248.1 gi|154151892|ref|YP_001405510.1| - 0.21 10.8 1.5 9.2 5.6 0.1 2.1 2 0 0 2 2 2 0 zinc-ribbon domain DUF35_N PF12172.3 gi|154151892|ref|YP_001405510.1| - 0.29 11.0 5.6 3.7 7.5 0.1 2.2 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Nudix_N_2 PF14803.1 gi|154151892|ref|YP_001405510.1| - 0.36 10.5 4.9 7.8 6.2 0.1 3.0 3 0 0 3 3 3 0 Nudix N-terminal zf-C3HC4_3 PF13920.1 gi|154151892|ref|YP_001405510.1| - 0.49 10.0 4.7 0.099 12.3 1.1 1.3 2 0 0 2 2 1 0 Zinc finger, C3HC4 type (RING finger) zf-HIT PF04438.11 gi|154151892|ref|YP_001405510.1| - 0.57 9.8 0.3 0.57 9.8 0.2 2.1 2 0 0 2 2 2 0 HIT zinc finger zf-H2C2_2 PF13465.1 gi|154151892|ref|YP_001405510.1| - 0.77 10.1 3.7 1.1 9.6 0.2 2.1 2 0 0 2 2 2 0 Zinc-finger double domain zf-IS66 PF13005.2 gi|154151892|ref|YP_001405510.1| - 0.86 9.6 6.6 1.1 9.2 0.2 2.8 2 1 1 3 3 3 0 zinc-finger binding domain of transposase IS66 TF_Zn_Ribbon PF08271.7 gi|154151892|ref|YP_001405510.1| - 0.91 8.9 6.5 7.2 6.0 1.1 2.4 2 1 0 2 2 2 0 TFIIB zinc-binding UPF0547 PF10571.4 gi|154151892|ref|YP_001405510.1| - 1.3 8.7 5.1 3.5 7.4 0.3 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-C2H2 PF00096.21 gi|154151892|ref|YP_001405510.1| - 2.3 8.7 5.1 0.75 10.2 0.5 2.0 2 0 0 2 2 2 0 Zinc finger, C2H2 type T2SF PF00482.18 gi|154151893|ref|YP_001405511.1| - 2.2e-30 105.1 13.1 1.6e-18 66.7 2.8 4.7 5 0 0 5 5 5 2 Type II secretion system (T2SS), protein F T2SE PF00437.15 gi|154151894|ref|YP_001405512.1| - 4.8e-47 160.1 0.0 7.7e-47 159.4 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.1 gi|154151894|ref|YP_001405512.1| - 0.0075 15.7 0.0 0.017 14.6 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain KaiC PF06745.8 gi|154151895|ref|YP_001405513.1| - 1.5e-07 30.7 0.2 2.3e-06 26.9 0.1 2.1 1 1 0 1 1 1 1 KaiC AAA_25 PF13481.1 gi|154151895|ref|YP_001405513.1| - 4.8e-06 26.1 0.0 1.2e-05 24.8 0.0 1.6 1 1 0 1 1 1 1 AAA domain Rad51 PF08423.6 gi|154151895|ref|YP_001405513.1| - 0.00091 18.2 0.0 0.018 13.9 0.0 2.1 2 0 0 2 2 2 1 Rad51 PAXNEB PF05625.6 gi|154151895|ref|YP_001405513.1| - 0.14 11.0 0.3 0.3 9.8 0.1 1.6 2 0 0 2 2 2 0 PAXNEB protein KaiC PF06745.8 gi|154151896|ref|YP_001405514.1| - 7.4e-53 178.9 0.0 8.3e-53 178.8 0.0 1.0 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.1 gi|154151896|ref|YP_001405514.1| - 1.1e-10 41.2 0.0 1.4e-10 40.8 0.0 1.1 1 0 0 1 1 1 1 AAA domain RecA PF00154.16 gi|154151896|ref|YP_001405514.1| - 7.5e-06 25.2 0.0 1.8e-05 23.9 0.0 1.6 2 0 0 2 2 2 1 recA bacterial DNA recombination protein AAA_14 PF13173.1 gi|154151896|ref|YP_001405514.1| - 0.00018 21.4 0.2 0.0019 18.1 0.1 2.2 1 1 0 1 1 1 1 AAA domain GvpD PF07088.6 gi|154151896|ref|YP_001405514.1| - 0.0003 19.2 0.2 0.0016 16.8 0.1 1.9 1 1 0 1 1 1 1 GvpD gas vesicle protein IstB_IS21 PF01695.12 gi|154151896|ref|YP_001405514.1| - 0.0015 17.9 0.0 0.25 10.7 0.0 2.2 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_19 PF13245.1 gi|154151896|ref|YP_001405514.1| - 0.005 16.5 0.0 0.009 15.7 0.0 1.3 1 0 0 1 1 1 1 Part of AAA domain Rad51 PF08423.6 gi|154151896|ref|YP_001405514.1| - 0.0052 15.7 0.2 0.0075 15.1 0.1 1.3 1 1 0 1 1 1 1 Rad51 DUF3783 PF12646.2 gi|154151896|ref|YP_001405514.1| - 0.0068 16.1 0.1 0.34 10.6 0.0 2.6 3 0 0 3 3 2 1 Domain of unknown function (DUF3783) MEDS PF14417.1 gi|154151896|ref|YP_001405514.1| - 0.013 14.5 0.0 0.23 10.4 0.0 2.2 1 1 1 2 2 2 0 MEDS: MEthanogen/methylotroph, DcmR Sensory domain AAA_10 PF12846.2 gi|154151896|ref|YP_001405514.1| - 0.014 14.8 0.0 0.015 14.7 0.0 1.2 1 0 0 1 1 1 0 AAA-like domain Lipase_GDSL_3 PF14606.1 gi|154151896|ref|YP_001405514.1| - 0.021 14.5 0.0 0.032 13.9 0.0 1.2 1 0 0 1 1 1 0 GDSL-like Lipase/Acylhydrolase family DnaB_C PF03796.10 gi|154151896|ref|YP_001405514.1| - 0.025 13.4 0.0 0.064 12.1 0.0 1.7 2 0 0 2 2 2 0 DnaB-like helicase C terminal domain AAA_24 PF13479.1 gi|154151896|ref|YP_001405514.1| - 0.029 13.9 0.0 0.047 13.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain TrwB_AAD_bind PF10412.4 gi|154151896|ref|YP_001405514.1| - 0.03 12.9 0.0 0.049 12.2 0.0 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_31 PF13614.1 gi|154151896|ref|YP_001405514.1| - 0.037 13.9 0.0 0.058 13.3 0.0 1.5 1 1 0 1 1 1 0 AAA domain Arch_ATPase PF01637.13 gi|154151896|ref|YP_001405514.1| - 0.058 13.0 0.0 0.082 12.5 0.0 1.2 1 0 0 1 1 1 0 Archaeal ATPase PAXNEB PF05625.6 gi|154151896|ref|YP_001405514.1| - 0.069 11.9 2.8 0.33 9.7 0.8 2.1 1 1 1 2 2 2 0 PAXNEB protein Ins_allergen_rp PF06757.8 gi|154151896|ref|YP_001405514.1| - 0.07 12.6 0.1 0.14 11.6 0.0 1.5 1 1 0 1 1 1 0 Insect allergen related repeat, nitrile-specifier detoxification AAA_18 PF13238.1 gi|154151896|ref|YP_001405514.1| - 0.29 11.4 1.3 0.55 10.5 0.9 1.8 1 1 0 1 1 1 0 AAA domain AAA_17 PF13207.1 gi|154151896|ref|YP_001405514.1| - 0.81 10.5 3.7 3.7 8.3 2.5 2.3 1 1 0 1 1 1 0 AAA domain FmdE PF02663.9 gi|154151898|ref|YP_001405516.1| - 2.4e-30 105.0 0.0 3.2e-30 104.6 0.0 1.2 1 0 0 1 1 1 1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon zf-dskA_traR PF01258.12 gi|154151898|ref|YP_001405516.1| - 4.2e-10 39.1 0.6 8e-10 38.2 0.4 1.5 1 0 0 1 1 1 1 Prokaryotic dksA/traR C4-type zinc finger LIM PF00412.17 gi|154151898|ref|YP_001405516.1| - 0.013 15.5 0.5 0.032 14.2 0.2 1.7 2 0 0 2 2 2 0 LIM domain zinc_ribbon_2 PF13240.1 gi|154151898|ref|YP_001405516.1| - 0.023 14.1 5.1 0.71 9.4 0.2 2.8 2 1 2 4 4 4 0 zinc-ribbon domain zf-C3HC4_2 PF13923.1 gi|154151898|ref|YP_001405516.1| - 0.029 14.3 0.2 0.081 12.9 0.1 1.8 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-ribbon_3 PF13248.1 gi|154151898|ref|YP_001405516.1| - 0.056 12.6 4.7 0.18 11.0 2.0 2.6 2 1 1 3 3 3 0 zinc-ribbon domain Zn-ribbon_8 PF09723.5 gi|154151898|ref|YP_001405516.1| - 0.083 12.8 0.5 0.19 11.6 0.1 1.7 2 0 0 2 2 2 0 Zinc ribbon domain Prim_Zn_Ribbon PF08273.7 gi|154151898|ref|YP_001405516.1| - 0.23 11.5 2.1 19 5.4 0.1 2.3 1 1 1 2 2 2 0 Zinc-binding domain of primase-helicase TF_Zn_Ribbon PF08271.7 gi|154151898|ref|YP_001405516.1| - 0.24 10.7 3.9 0.28 10.5 0.2 2.6 1 1 1 2 2 2 0 TFIIB zinc-binding Prok-RING_1 PF14446.1 gi|154151898|ref|YP_001405516.1| - 0.35 10.6 2.0 1.1 9.0 1.4 1.8 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 DZR PF12773.2 gi|154151898|ref|YP_001405516.1| - 0.69 9.7 3.3 0.65 9.8 0.7 2.1 2 1 0 2 2 2 0 Double zinc ribbon RRN7 PF11781.3 gi|154151898|ref|YP_001405516.1| - 1.1 8.8 4.2 0.93 9.0 1.6 1.8 2 0 0 2 2 2 0 RNA polymerase I-specific transcription initiation factor Rrn7 Methyltransf_18 PF12847.2 gi|154151899|ref|YP_001405517.1| - 9.4e-14 51.9 0.0 1.7e-13 51.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|154151899|ref|YP_001405517.1| - 2.5e-12 46.7 0.0 3.8e-12 46.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|154151899|ref|YP_001405517.1| - 4.6e-08 33.4 0.0 7.2e-08 32.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.7 gi|154151899|ref|YP_001405517.1| - 2.7e-07 30.9 0.0 4.8e-07 30.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|154151899|ref|YP_001405517.1| - 3.2e-07 30.0 0.0 5e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_26 PF13659.1 gi|154151899|ref|YP_001405517.1| - 9.9e-07 28.8 0.0 1.7e-06 28.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.1 gi|154151899|ref|YP_001405517.1| - 2.7e-06 27.6 0.0 5.7e-06 26.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 gi|154151899|ref|YP_001405517.1| - 0.0001 21.4 0.0 0.00016 20.7 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase GidB PF02527.10 gi|154151899|ref|YP_001405517.1| - 0.0006 18.9 0.0 0.0011 18.1 0.0 1.4 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G TehB PF03848.9 gi|154151899|ref|YP_001405517.1| - 0.0008 18.6 0.0 0.0015 17.7 0.0 1.4 2 0 0 2 2 2 1 Tellurite resistance protein TehB SAM_MT PF04445.8 gi|154151899|ref|YP_001405517.1| - 0.0012 18.0 0.0 0.0018 17.4 0.0 1.2 1 0 0 1 1 1 1 Putative SAM-dependent methyltransferase MTS PF05175.9 gi|154151899|ref|YP_001405517.1| - 0.0016 17.8 0.0 0.0025 17.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Met_10 PF02475.11 gi|154151899|ref|YP_001405517.1| - 0.0052 16.3 0.0 0.0074 15.8 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein PCMT PF01135.14 gi|154151899|ref|YP_001405517.1| - 0.0076 15.8 0.0 0.012 15.1 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CMAS PF02353.15 gi|154151899|ref|YP_001405517.1| - 0.016 14.2 0.0 0.023 13.7 0.0 1.1 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase PrmA PF06325.8 gi|154151899|ref|YP_001405517.1| - 0.041 13.0 0.0 0.06 12.4 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Ubie_methyltran PF01209.13 gi|154151899|ref|YP_001405517.1| - 0.062 12.3 0.0 0.096 11.7 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_18 PF12847.2 gi|154151900|ref|YP_001405518.1| - 3.6e-12 46.8 0.0 6.4e-12 46.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.1 gi|154151900|ref|YP_001405518.1| - 6.1e-08 32.5 0.0 8.9e-08 32.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.7 gi|154151900|ref|YP_001405518.1| - 1.3e-07 31.9 0.0 2.2e-07 31.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.15 gi|154151900|ref|YP_001405518.1| - 0.00018 20.6 0.0 0.00027 20.0 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_26 PF13659.1 gi|154151900|ref|YP_001405518.1| - 0.00028 20.8 0.0 0.00046 20.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.1 gi|154151900|ref|YP_001405518.1| - 0.0004 19.9 0.0 0.00056 19.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.9 gi|154151900|ref|YP_001405518.1| - 0.0013 18.1 0.0 0.002 17.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.7 gi|154151900|ref|YP_001405518.1| - 0.0016 18.8 0.0 0.0027 18.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_16 PF10294.4 gi|154151900|ref|YP_001405518.1| - 0.0031 16.9 0.9 0.0045 16.4 0.0 1.7 2 0 0 2 2 2 1 Putative methyltransferase SAM_MT PF04445.8 gi|154151900|ref|YP_001405518.1| - 0.013 14.6 0.0 0.019 14.1 0.0 1.2 1 0 0 1 1 1 0 Putative SAM-dependent methyltransferase TehB PF03848.9 gi|154151900|ref|YP_001405518.1| - 0.015 14.4 0.0 0.022 13.8 0.0 1.2 1 0 0 1 1 1 0 Tellurite resistance protein TehB Met_10 PF02475.11 gi|154151900|ref|YP_001405518.1| - 0.028 14.0 0.0 0.082 12.4 0.0 1.8 2 1 0 2 2 2 0 Met-10+ like-protein PCMT PF01135.14 gi|154151900|ref|YP_001405518.1| - 0.028 13.9 0.0 0.039 13.4 0.0 1.2 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CMAS PF02353.15 gi|154151900|ref|YP_001405518.1| - 0.029 13.4 0.0 0.079 12.0 0.0 1.7 1 1 1 2 2 2 0 Mycolic acid cyclopropane synthetase Methyltransf_25 PF13649.1 gi|154151900|ref|YP_001405518.1| - 0.043 14.1 0.0 0.08 13.3 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain DUF3807 PF12720.2 gi|154151901|ref|YP_001405519.1| - 0.041 14.0 0.1 0.041 14.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3807) Radical_SAM PF04055.16 gi|154151902|ref|YP_001405520.1| - 3e-14 53.5 0.0 4.4e-13 49.7 0.0 2.4 2 0 0 2 2 2 1 Radical SAM superfamily Peripla_BP_2 PF01497.13 gi|154151902|ref|YP_001405520.1| - 1.3e-10 40.8 0.0 1.9e-10 40.2 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein Fer4_12 PF13353.1 gi|154151902|ref|YP_001405520.1| - 1.3e-05 25.3 0.0 3e-05 24.1 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.1 gi|154151902|ref|YP_001405520.1| - 0.1 12.6 0.0 0.25 11.3 0.0 1.6 1 0 0 1 1 1 0 4Fe-4S single cluster domain DUF364 PF04016.7 gi|154151903|ref|YP_001405521.1| - 6.5e-44 148.8 0.0 8.9e-44 148.3 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF364) DUF4213 PF13938.1 gi|154151903|ref|YP_001405521.1| - 4.9e-24 84.2 0.0 7.8e-24 83.6 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4213) Response_reg PF00072.19 gi|154151904|ref|YP_001405522.1| - 2.2e-17 63.0 0.1 4.4e-17 62.0 0.1 1.5 1 0 0 1 1 1 1 Response regulator receiver domain DASH_Dad3 PF08656.5 gi|154151904|ref|YP_001405522.1| - 0.036 13.7 0.0 0.084 12.5 0.0 1.6 1 0 0 1 1 1 0 DASH complex subunit Dad3 PAS_9 PF13426.1 gi|154151905|ref|YP_001405523.1| - 3.4e-31 107.7 0.0 1e-08 35.4 0.0 4.9 5 0 0 5 5 5 4 PAS domain PAS_4 PF08448.5 gi|154151905|ref|YP_001405523.1| - 2.9e-19 69.1 0.0 0.00019 21.4 0.0 5.4 5 0 0 5 5 5 3 PAS fold PAS PF00989.19 gi|154151905|ref|YP_001405523.1| - 4.3e-19 68.3 0.0 6.1e-06 25.9 0.0 4.8 5 0 0 5 5 5 3 PAS fold Response_reg PF00072.19 gi|154151905|ref|YP_001405523.1| - 5e-18 65.1 0.0 9.7e-18 64.2 0.0 1.4 1 0 0 1 1 1 1 Response regulator receiver domain PAS_3 PF08447.6 gi|154151905|ref|YP_001405523.1| - 6.2e-18 64.6 0.0 3.1e-09 36.8 0.1 4.6 5 0 0 5 5 5 2 PAS fold HATPase_c PF02518.21 gi|154151905|ref|YP_001405523.1| - 1.7e-17 63.1 0.0 3.5e-17 62.1 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.1 gi|154151905|ref|YP_001405523.1| - 1.8e-17 62.4 0.0 6.3e-06 25.8 0.0 4.0 4 0 0 4 4 4 3 PAS domain PAS_7 PF12860.2 gi|154151905|ref|YP_001405523.1| - 0.0048 16.8 0.0 14 5.7 0.0 3.7 3 0 0 3 3 3 0 PAS fold HATPase_c_3 PF13589.1 gi|154151905|ref|YP_001405523.1| - 0.011 15.4 0.0 0.02 14.5 0.0 1.4 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_5 PF14501.1 gi|154151905|ref|YP_001405523.1| - 0.064 12.9 0.0 0.19 11.4 0.0 1.7 1 0 0 1 1 1 0 GHKL domain HATPase_c_2 PF13581.1 gi|154151905|ref|YP_001405523.1| - 0.086 12.6 0.0 0.18 11.5 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-like ATPase domain TPR_11 PF13414.1 gi|154151906|ref|YP_001405524.1| - 2.2e-61 203.3 3.8 6.1e-16 57.8 0.1 3.7 2 1 3 5 5 5 5 TPR repeat TPR_1 PF00515.23 gi|154151906|ref|YP_001405524.1| - 2.8e-47 156.4 0.1 2.5e-09 36.3 0.0 7.3 7 0 0 7 7 7 6 Tetratricopeptide repeat TPR_2 PF07719.12 gi|154151906|ref|YP_001405524.1| - 1.7e-43 143.0 1.0 1e-07 31.3 0.2 6.6 6 0 0 6 6 6 6 Tetratricopeptide repeat TPR_17 PF13431.1 gi|154151906|ref|YP_001405524.1| - 5.1e-37 122.9 1.1 7.8e-07 28.8 0.0 7.1 7 0 0 7 7 7 5 Tetratricopeptide repeat TPR_12 PF13424.1 gi|154151906|ref|YP_001405524.1| - 9.3e-34 115.2 3.5 1.7e-10 40.6 0.1 4.0 2 1 2 4 4 4 4 Tetratricopeptide repeat TPR_8 PF13181.1 gi|154151906|ref|YP_001405524.1| - 2.2e-33 111.4 0.0 2.1e-05 23.9 0.0 6.6 5 1 1 6 6 6 6 Tetratricopeptide repeat TPR_16 PF13432.1 gi|154151906|ref|YP_001405524.1| - 2.7e-31 107.5 5.8 1.7e-09 38.0 1.1 4.7 3 1 0 4 4 4 4 Tetratricopeptide repeat TPR_14 PF13428.1 gi|154151906|ref|YP_001405524.1| - 2.3e-26 89.8 9.0 5e-05 23.5 0.1 6.6 2 2 4 6 6 6 5 Tetratricopeptide repeat TPR_7 PF13176.1 gi|154151906|ref|YP_001405524.1| - 7.8e-26 87.7 0.7 0.00019 21.0 0.0 6.6 6 0 0 6 6 6 5 Tetratricopeptide repeat TPR_9 PF13371.1 gi|154151906|ref|YP_001405524.1| - 8.1e-24 83.2 3.4 1.3e-06 28.1 0.3 4.9 2 1 3 5 5 5 5 Tetratricopeptide repeat Pkinase PF00069.20 gi|154151906|ref|YP_001405524.1| - 1.5e-21 76.7 0.0 2.3e-21 76.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.12 gi|154151906|ref|YP_001405524.1| - 4.6e-20 71.7 0.0 6.4e-20 71.3 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase TPR_19 PF14559.1 gi|154151906|ref|YP_001405524.1| - 4.9e-18 65.2 2.2 7.8e-06 26.1 0.0 3.7 2 1 0 3 3 3 3 Tetratricopeptide repeat TPR_4 PF07721.9 gi|154151906|ref|YP_001405524.1| - 7.2e-11 41.4 4.7 1.2 9.8 0.0 6.2 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_6 PF13174.1 gi|154151906|ref|YP_001405524.1| - 7.5e-10 38.6 0.8 2.1 8.9 0.0 6.1 7 0 0 7 7 5 2 Tetratricopeptide repeat TPR_21 PF09976.4 gi|154151906|ref|YP_001405524.1| - 4.3e-07 29.9 1.2 1.5 8.7 0.0 5.2 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_10 PF13374.1 gi|154151906|ref|YP_001405524.1| - 1.2e-06 28.2 9.7 0.17 11.8 1.1 5.6 5 0 0 5 5 5 1 Tetratricopeptide repeat BTAD PF03704.12 gi|154151906|ref|YP_001405524.1| - 1.4e-06 28.6 0.9 0.068 13.4 0.0 3.0 3 0 0 3 3 3 2 Bacterial transcriptional activator domain Apc3 PF12895.2 gi|154151906|ref|YP_001405524.1| - 1.9e-06 27.8 0.0 0.016 15.3 0.0 3.4 1 1 1 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 DUF3856 PF12968.2 gi|154151906|ref|YP_001405524.1| - 4.9e-05 23.1 1.4 5.2 6.8 0.0 4.5 2 2 1 4 4 4 0 Domain of Unknown Function (DUF3856) RPN7 PF10602.4 gi|154151906|ref|YP_001405524.1| - 7.5e-05 22.1 0.4 5 6.4 0.0 4.3 4 1 1 5 5 5 1 26S proteasome subunit RPN7 TPR_15 PF13429.1 gi|154151906|ref|YP_001405524.1| - 0.00017 20.7 0.8 0.055 12.5 0.5 2.7 2 1 0 2 2 2 1 Tetratricopeptide repeat NARP1 PF12569.3 gi|154151906|ref|YP_001405524.1| - 0.0007 18.4 0.0 0.78 8.4 0.0 3.3 2 1 0 3 3 3 1 NMDA receptor-regulated protein 1 MIT PF04212.13 gi|154151906|ref|YP_001405524.1| - 0.00098 18.9 2.4 4.7 7.1 0.1 4.3 4 0 0 4 4 4 1 MIT (microtubule interacting and transport) domain PPR PF01535.15 gi|154151906|ref|YP_001405524.1| - 0.0043 16.9 4.7 62 3.9 0.0 6.5 8 0 0 8 8 7 0 PPR repeat Kinase-like PF14531.1 gi|154151906|ref|YP_001405524.1| - 0.0057 15.6 0.0 0.012 14.5 0.0 1.5 1 0 0 1 1 1 1 Kinase-like MHC_II_beta PF00969.14 gi|154151906|ref|YP_001405524.1| - 0.015 15.2 0.1 0.37 10.8 0.0 3.1 1 1 3 4 4 4 0 Class II histocompatibility antigen, beta domain SHNi-TPR PF10516.4 gi|154151906|ref|YP_001405524.1| - 0.096 11.9 2.6 13 5.1 0.1 4.0 4 0 0 4 4 4 0 SHNi-TPR MDMPI_N PF11716.3 gi|154151906|ref|YP_001405524.1| - 0.38 11.1 3.9 4.8 7.5 0.7 2.9 1 1 0 2 2 2 0 Mycothiol maleylpyruvate isomerase N-terminal domain SBP_bac_6 PF13343.1 gi|154151908|ref|YP_001405526.1| - 6.2e-65 218.8 0.0 7.9e-65 218.5 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein DUF1858 PF08984.6 gi|154151908|ref|YP_001405526.1| - 0.0062 16.1 0.0 0.01 15.4 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1858) cobW PF02492.14 gi|154151909|ref|YP_001405527.1| - 1.6e-14 53.7 0.0 7.6e-14 51.5 0.0 1.8 1 1 1 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain ArgK PF03308.11 gi|154151909|ref|YP_001405527.1| - 0.00057 18.7 0.1 0.62 8.7 0.1 2.3 2 0 0 2 2 2 2 ArgK protein AAA_19 PF13245.1 gi|154151909|ref|YP_001405527.1| - 0.00064 19.4 0.7 0.0017 18.0 0.3 1.8 2 0 0 2 2 2 1 Part of AAA domain RecA PF00154.16 gi|154151909|ref|YP_001405527.1| - 0.0027 16.8 0.0 0.0043 16.1 0.0 1.3 1 0 0 1 1 1 1 recA bacterial DNA recombination protein MobB PF03205.9 gi|154151909|ref|YP_001405527.1| - 0.0055 16.4 0.0 0.049 13.3 0.0 2.2 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_33 PF13671.1 gi|154151909|ref|YP_001405527.1| - 0.013 15.3 0.0 1.6 8.5 0.0 2.2 2 0 0 2 2 2 0 AAA domain KTI12 PF08433.5 gi|154151909|ref|YP_001405527.1| - 0.014 14.5 0.0 0.02 14.1 0.0 1.2 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_16 PF13191.1 gi|154151909|ref|YP_001405527.1| - 0.014 15.3 0.0 0.13 12.2 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain AAA_22 PF13401.1 gi|154151909|ref|YP_001405527.1| - 0.015 15.4 0.0 1.4 9.0 0.0 2.3 2 0 0 2 2 2 0 AAA domain NACHT PF05729.7 gi|154151909|ref|YP_001405527.1| - 0.044 13.4 0.0 4.8 6.8 0.0 2.5 2 0 0 2 2 2 0 NACHT domain Zeta_toxin PF06414.7 gi|154151909|ref|YP_001405527.1| - 0.053 12.6 0.1 0.18 10.8 0.1 1.7 2 0 0 2 2 2 0 Zeta toxin DnaB_C PF03796.10 gi|154151909|ref|YP_001405527.1| - 0.11 11.3 0.1 0.16 10.7 0.1 1.2 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain DUF1846 PF08903.6 gi|154151909|ref|YP_001405527.1| - 0.12 10.7 0.0 0.17 10.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1846) AAA_30 PF13604.1 gi|154151909|ref|YP_001405527.1| - 0.14 11.7 0.4 2.4 7.7 0.3 2.4 3 0 0 3 3 3 0 AAA domain AAA_11 PF13086.1 gi|154151909|ref|YP_001405527.1| - 0.15 11.6 0.0 0.31 10.5 0.0 1.4 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.22 gi|154151910|ref|YP_001405528.1| - 2.8e-10 40.6 0.0 4.3e-10 40.0 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.1 gi|154151910|ref|YP_001405528.1| - 2e-09 37.8 0.1 2.5e-05 24.3 0.0 2.1 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|154151910|ref|YP_001405528.1| - 0.00017 20.9 0.1 0.093 11.9 0.1 2.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.1 gi|154151910|ref|YP_001405528.1| - 0.00034 20.7 0.3 0.0026 17.8 0.2 2.1 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.1 gi|154151910|ref|YP_001405528.1| - 0.00056 19.9 0.1 0.00087 19.3 0.1 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.1 gi|154151910|ref|YP_001405528.1| - 0.011 15.2 0.0 0.022 14.1 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA_5 PF07728.9 gi|154151910|ref|YP_001405528.1| - 0.011 15.4 0.0 1.2 8.8 0.0 2.5 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_29 PF13555.1 gi|154151910|ref|YP_001405528.1| - 0.061 12.8 0.0 0.13 11.8 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.1 gi|154151910|ref|YP_001405528.1| - 0.077 13.3 0.0 0.11 12.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain NACHT PF05729.7 gi|154151910|ref|YP_001405528.1| - 0.11 12.2 0.0 0.25 10.9 0.0 1.5 1 1 0 1 1 1 0 NACHT domain AAA_14 PF13173.1 gi|154151910|ref|YP_001405528.1| - 0.13 12.1 0.0 9.8 6.0 0.0 2.4 2 0 0 2 2 2 0 AAA domain SBP_bac_11 PF13531.1 gi|154151911|ref|YP_001405529.1| - 1.3e-12 47.9 0.2 1.8e-12 47.3 0.1 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_3 PF00497.15 gi|154151911|ref|YP_001405529.1| - 3.1e-05 23.3 0.1 4.7e-05 22.7 0.1 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 3 Phosphonate-bd PF12974.2 gi|154151911|ref|YP_001405529.1| - 4.3e-05 23.0 0.2 0.00013 21.4 0.1 1.7 2 0 0 2 2 2 1 ABC transporter, phosphonate, periplasmic substrate-binding protein NMT1 PF09084.6 gi|154151911|ref|YP_001405529.1| - 6.8e-05 22.5 0.0 0.00013 21.6 0.0 1.4 1 0 0 1 1 1 1 NMT1/THI5 like SBP_bac_1 PF01547.20 gi|154151911|ref|YP_001405529.1| - 0.023 14.4 0.4 0.15 11.7 0.2 1.9 2 0 0 2 2 2 0 Bacterial extracellular solute-binding protein DUF1628 PF07790.6 gi|154151912|ref|YP_001405530.1| - 1.4e-23 83.4 1.7 2.7e-23 82.5 1.2 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1628) TrbL PF04610.9 gi|154151912|ref|YP_001405530.1| - 0.012 15.3 0.4 0.023 14.3 0.3 1.4 1 0 0 1 1 1 0 TrbL/VirB6 plasmid conjugal transfer protein DUF1628 PF07790.6 gi|154151913|ref|YP_001405531.1| - 8.2e-16 58.5 1.6 1.4e-15 57.7 1.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1628) DUF1628 PF07790.6 gi|154151914|ref|YP_001405532.1| - 1.4e-24 86.5 5.0 7.4e-23 81.1 2.3 2.5 2 0 0 2 2 2 1 Protein of unknown function (DUF1628) Big_1 PF02369.11 gi|154151914|ref|YP_001405532.1| - 0.08 12.8 6.6 4.2 7.3 0.1 2.9 2 1 0 2 2 2 0 Bacterial Ig-like domain (group 1) EphA2_TM PF14575.1 gi|154151914|ref|YP_001405532.1| - 0.11 12.9 0.3 13 6.2 0.0 2.3 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain DUF1628 PF07790.6 gi|154151915|ref|YP_001405533.1| - 5.9e-17 62.1 5.3 1.5e-16 60.9 3.7 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF1628) Na_H_antiport_2 PF13726.1 gi|154151915|ref|YP_001405533.1| - 1.1 9.2 6.7 0.49 10.3 2.4 2.0 2 0 0 2 2 2 0 Na+-H+ antiporter family SBP_bac_5 PF00496.17 gi|154151916|ref|YP_001405534.1| - 1.6e-66 224.6 4.4 2.2e-66 224.2 3.1 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle BPD_transp_1 PF00528.17 gi|154151917|ref|YP_001405535.1| - 1.7e-35 122.2 16.9 1.7e-35 122.2 11.7 1.7 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF3169 PF11368.3 gi|154151917|ref|YP_001405535.1| - 0.053 12.7 3.3 0.15 11.2 2.3 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3169) BPD_transp_1 PF00528.17 gi|154151918|ref|YP_001405536.1| - 2e-22 79.6 15.4 2e-22 79.6 10.7 1.5 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.2 gi|154151918|ref|YP_001405536.1| - 0.0038 16.5 5.6 0.0068 15.7 0.1 2.7 2 0 0 2 2 2 1 N-terminal TM domain of oligopeptide transport permease C ABC_tran PF00005.22 gi|154151919|ref|YP_001405537.1| - 7.1e-22 78.1 0.0 9.4e-22 77.7 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.7 gi|154151919|ref|YP_001405537.1| - 1.3e-16 60.7 0.3 2.2e-16 59.9 0.2 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.1 gi|154151919|ref|YP_001405537.1| - 7.5e-10 39.2 0.1 4.7e-09 36.6 0.0 1.9 1 1 0 2 2 2 1 AAA domain AAA_16 PF13191.1 gi|154151919|ref|YP_001405537.1| - 0.0026 17.7 0.0 0.0042 17.1 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_13 PF13166.1 gi|154151919|ref|YP_001405537.1| - 0.012 14.1 0.0 0.016 13.6 0.0 1.1 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.16 gi|154151919|ref|YP_001405537.1| - 0.041 13.0 0.0 0.23 10.5 0.0 1.9 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_15 PF13175.1 gi|154151919|ref|YP_001405537.1| - 0.062 12.3 0.0 0.49 9.3 0.0 1.9 2 0 0 2 2 2 0 AAA ATPase domain ATP-synt_ab PF00006.20 gi|154151919|ref|YP_001405537.1| - 0.074 12.5 0.5 0.078 12.4 0.4 1.3 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain ABC_tran PF00005.22 gi|154151920|ref|YP_001405538.1| - 3e-33 115.0 0.0 7.4e-33 113.7 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.1 gi|154151920|ref|YP_001405538.1| - 1.3e-09 38.4 0.6 3e-06 27.3 0.0 2.2 1 1 1 2 2 2 2 AAA domain SMC_N PF02463.14 gi|154151920|ref|YP_001405538.1| - 1.5e-08 34.1 0.0 3.3e-08 33.0 0.0 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain oligo_HPY PF08352.7 gi|154151920|ref|YP_001405538.1| - 0.00073 19.8 0.0 0.0013 19.0 0.0 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_22 PF13401.1 gi|154151920|ref|YP_001405538.1| - 0.0069 16.5 0.1 1.2 9.2 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.1 gi|154151920|ref|YP_001405538.1| - 0.0075 15.7 0.2 0.015 14.7 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF258 PF03193.11 gi|154151920|ref|YP_001405538.1| - 0.06 12.5 0.1 0.11 11.6 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF258 AAA_10 PF12846.2 gi|154151920|ref|YP_001405538.1| - 0.13 11.6 2.0 18 4.6 0.0 2.8 2 1 0 3 3 3 0 AAA-like domain AAA_16 PF13191.1 gi|154151920|ref|YP_001405538.1| - 0.15 12.0 2.4 0.33 10.9 1.6 1.8 1 1 0 1 1 1 0 AAA ATPase domain DUF1628 PF07790.6 gi|154151921|ref|YP_001405539.1| - 4.9e-20 72.0 0.6 1e-19 71.0 0.4 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1628) DUF1628 PF07790.6 gi|154151923|ref|YP_001405541.1| - 2e-18 66.8 0.1 3.8e-18 65.9 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1628) T2SF PF00482.18 gi|154151924|ref|YP_001405542.1| - 2.8e-21 75.6 15.1 9.6e-13 48.1 0.5 3.7 3 0 0 3 3 3 2 Type II secretion system (T2SS), protein F T2SE PF00437.15 gi|154151925|ref|YP_001405543.1| - 2.8e-55 187.1 0.0 4.1e-55 186.5 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein Zeta_toxin PF06414.7 gi|154151925|ref|YP_001405543.1| - 0.053 12.6 0.0 0.1 11.7 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin BofA PF07441.6 gi|154151927|ref|YP_001405545.1| - 7.6e-12 45.0 17.5 9.1e-12 44.8 12.2 1.1 1 0 0 1 1 1 1 SigmaK-factor processing regulatory protein BofA Intg_mem_TP0381 PF09529.5 gi|154151927|ref|YP_001405545.1| - 0.08 12.1 4.5 0.09 12.0 3.2 1.1 1 0 0 1 1 1 0 Integral membrane protein (intg_mem_TP0381) DUF3488 PF11992.3 gi|154151927|ref|YP_001405545.1| - 0.26 9.8 6.7 0.3 9.6 4.7 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) PTPS_related PF10131.4 gi|154151927|ref|YP_001405545.1| - 0.38 8.8 6.9 0.4 8.7 4.8 1.1 1 0 0 1 1 1 0 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein Vma12 PF11712.3 gi|154151927|ref|YP_001405545.1| - 1.6 8.4 3.5 2.8 7.6 2.4 1.5 1 1 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase DUF4131 PF13567.1 gi|154151927|ref|YP_001405545.1| - 4 6.7 6.4 5 6.4 4.3 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) MMPL PF03176.10 gi|154151927|ref|YP_001405545.1| - 4.1 6.0 6.6 5.2 5.6 4.6 1.1 1 0 0 1 1 1 0 MMPL family DUF2933 PF11666.3 gi|154151927|ref|YP_001405545.1| - 5.2 6.6 6.2 17 5.0 4.3 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2933) Presenilin PF01080.12 gi|154151927|ref|YP_001405545.1| - 9.4 4.9 8.0 10 4.8 5.5 1.2 1 0 0 1 1 1 0 Presenilin PmbA_TldD PF01523.11 gi|154151928|ref|YP_001405546.1| - 3.4e-61 207.1 0.0 4.6e-61 206.6 0.0 1.2 1 0 0 1 1 1 1 Putative modulator of DNA gyrase PmbA_TldD PF01523.11 gi|154151929|ref|YP_001405547.1| - 5.8e-58 196.4 0.0 6.9e-58 196.2 0.0 1.1 1 0 0 1 1 1 1 Putative modulator of DNA gyrase Lon_C PF05362.8 gi|154151930|ref|YP_001405548.1| - 1.2e-34 119.4 5.5 2.3e-34 118.4 3.8 1.5 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain AAA_32 PF13654.1 gi|154151930|ref|YP_001405548.1| - 5.4e-32 111.1 0.0 4.3e-22 78.4 0.0 2.1 2 0 0 2 2 2 2 AAA domain Sigma54_activat PF00158.21 gi|154151930|ref|YP_001405548.1| - 8.3e-16 57.9 0.1 1.3e-07 31.2 0.0 3.5 3 1 0 3 3 3 2 Sigma-54 interaction domain Mg_chelatase PF01078.16 gi|154151930|ref|YP_001405548.1| - 8.8e-16 57.6 0.7 1.7e-10 40.4 0.1 2.7 3 0 0 3 3 3 2 Magnesium chelatase, subunit ChlI MCM PF00493.18 gi|154151930|ref|YP_001405548.1| - 1.4e-10 40.5 0.2 0.016 14.0 0.0 3.3 3 0 0 3 3 3 3 MCM2/3/5 family AAA_5 PF07728.9 gi|154151930|ref|YP_001405548.1| - 1.5e-10 40.9 0.0 0.0003 20.5 0.0 2.7 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) ChlI PF13541.1 gi|154151930|ref|YP_001405548.1| - 1.2e-09 37.6 0.5 2.5e-09 36.6 0.3 1.6 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase Sigma54_activ_2 PF14532.1 gi|154151930|ref|YP_001405548.1| - 3.2e-08 33.7 0.0 0.04 13.9 0.0 3.5 3 0 0 3 3 3 2 Sigma-54 interaction domain AAA PF00004.24 gi|154151930|ref|YP_001405548.1| - 4.7e-08 33.3 0.3 0.01 15.9 0.0 4.6 5 0 0 5 5 4 2 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.7 gi|154151930|ref|YP_001405548.1| - 4e-07 29.3 0.1 0.00029 19.9 0.1 2.6 2 0 0 2 2 2 2 Holliday junction DNA helicase ruvB N-terminus AAA_22 PF13401.1 gi|154151930|ref|YP_001405548.1| - 3.7e-06 27.0 0.0 0.0013 18.8 0.0 2.9 2 0 0 2 2 2 1 AAA domain AAA_19 PF13245.1 gi|154151930|ref|YP_001405548.1| - 1.6e-05 24.5 0.3 0.0011 18.6 0.0 2.8 2 0 0 2 2 2 1 Part of AAA domain AAA_3 PF07726.6 gi|154151930|ref|YP_001405548.1| - 2.8e-05 23.7 0.0 0.18 11.4 0.0 3.0 3 0 0 3 3 2 2 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.1 gi|154151930|ref|YP_001405548.1| - 0.00013 21.9 0.0 0.032 14.2 0.0 3.1 3 0 0 3 3 3 1 AAA ATPase domain AAA_30 PF13604.1 gi|154151930|ref|YP_001405548.1| - 0.00022 20.8 3.1 0.0018 17.8 0.0 2.9 3 0 0 3 3 3 1 AAA domain PhoH PF02562.11 gi|154151930|ref|YP_001405548.1| - 0.00022 20.5 0.1 0.0029 16.8 0.0 2.5 2 0 0 2 2 2 1 PhoH-like protein AAA_33 PF13671.1 gi|154151930|ref|YP_001405548.1| - 0.0019 18.1 0.0 0.0051 16.6 0.0 1.7 1 0 0 1 1 1 1 AAA domain T2SE PF00437.15 gi|154151930|ref|YP_001405548.1| - 0.0054 15.6 0.1 0.021 13.7 0.0 2.0 2 0 0 2 2 2 1 Type II/IV secretion system protein Parvo_NS1 PF01057.12 gi|154151930|ref|YP_001405548.1| - 0.0064 15.4 0.0 0.011 14.5 0.0 1.4 1 0 0 1 1 1 1 Parvovirus non-structural protein NS1 DUF815 PF05673.8 gi|154151930|ref|YP_001405548.1| - 0.0095 14.8 0.0 0.02 13.8 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_10 PF12846.2 gi|154151930|ref|YP_001405548.1| - 0.011 15.1 0.0 0.23 10.8 0.0 2.3 2 0 0 2 2 2 0 AAA-like domain AAA_2 PF07724.9 gi|154151930|ref|YP_001405548.1| - 0.012 15.5 0.0 8 6.3 0.0 3.3 3 0 0 3 3 3 0 AAA domain (Cdc48 subfamily) NACHT PF05729.7 gi|154151930|ref|YP_001405548.1| - 0.013 15.2 0.0 0.055 13.1 0.0 2.1 2 0 0 2 2 1 0 NACHT domain IstB_IS21 PF01695.12 gi|154151930|ref|YP_001405548.1| - 0.015 14.7 0.0 0.05 13.0 0.0 1.9 2 0 0 2 2 2 0 IstB-like ATP binding protein DUF2178 PF09946.4 gi|154151930|ref|YP_001405548.1| - 0.025 14.3 5.3 0.22 11.2 0.8 3.2 3 0 0 3 3 3 0 Predicted membrane protein (DUF2178) Zeta_toxin PF06414.7 gi|154151930|ref|YP_001405548.1| - 0.026 13.6 0.3 0.077 12.0 0.0 1.8 2 0 0 2 2 2 0 Zeta toxin AAA_18 PF13238.1 gi|154151930|ref|YP_001405548.1| - 0.027 14.7 0.0 0.09 13.0 0.0 2.0 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.22 gi|154151930|ref|YP_001405548.1| - 0.03 14.6 0.0 0.12 12.6 0.0 2.0 2 0 0 2 2 1 0 ABC transporter TrwB_AAD_bind PF10412.4 gi|154151930|ref|YP_001405548.1| - 0.042 12.4 0.0 0.078 11.5 0.0 1.4 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_25 PF13481.1 gi|154151930|ref|YP_001405548.1| - 0.047 13.0 0.0 0.92 8.8 0.0 2.8 3 0 0 3 3 2 0 AAA domain AAA_PrkA PF08298.6 gi|154151930|ref|YP_001405548.1| - 0.052 12.2 0.0 5.9 5.4 0.0 2.2 2 0 0 2 2 2 0 PrkA AAA domain AAA_17 PF13207.1 gi|154151930|ref|YP_001405548.1| - 0.063 14.0 0.0 0.35 11.6 0.0 2.2 2 0 0 2 2 2 0 AAA domain DUF2101 PF09874.4 gi|154151930|ref|YP_001405548.1| - 0.088 12.2 0.1 0.14 11.6 0.1 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2101) AAA_28 PF13521.1 gi|154151930|ref|YP_001405548.1| - 0.1 12.5 0.0 0.36 10.7 0.0 1.9 2 0 0 2 2 2 0 AAA domain Ribosomal_L18_c PF14204.1 gi|154151930|ref|YP_001405548.1| - 0.11 13.0 0.3 0.26 11.8 0.2 1.6 1 0 0 1 1 1 0 Ribosomal L18 C-terminal region DUF2075 PF09848.4 gi|154151930|ref|YP_001405548.1| - 0.14 11.1 0.0 0.24 10.3 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Pribosyltran_N PF13793.1 gi|154151931|ref|YP_001405549.1| - 1.4e-20 73.1 0.0 1.5e-19 69.8 0.0 2.1 2 0 0 2 2 2 1 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyltran PF00156.22 gi|154151931|ref|YP_001405549.1| - 7.4e-14 51.5 0.1 2.5e-13 49.8 0.0 1.9 2 0 0 2 2 2 1 Phosphoribosyl transferase domain Pribosyl_synth PF14572.1 gi|154151931|ref|YP_001405549.1| - 1.1e-08 35.1 0.1 1.8e-08 34.3 0.1 1.3 1 0 0 1 1 1 1 Phosphoribosyl synthetase-associated domain UPRTase PF14681.1 gi|154151931|ref|YP_001405549.1| - 0.0015 17.7 0.0 0.0025 17.0 0.0 1.4 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.1 gi|154151931|ref|YP_001405549.1| - 0.011 15.0 0.0 0.02 14.1 0.0 1.4 1 0 0 1 1 1 0 Phosphoribosyl transferase UPF0278 PF08745.6 gi|154151932|ref|YP_001405550.1| - 0.00031 20.0 0.2 0.0027 16.9 0.1 1.9 1 1 0 2 2 2 1 UPF0278 family zf-C3HC4_3 PF13920.1 gi|154151932|ref|YP_001405550.1| - 0.013 15.1 0.6 0.024 14.2 0.4 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zinc-ribbons_6 PF07191.7 gi|154151932|ref|YP_001405550.1| - 0.058 13.1 0.1 0.11 12.3 0.1 1.5 1 0 0 1 1 1 0 zinc-ribbons zf-ribbon_3 PF13248.1 gi|154151932|ref|YP_001405550.1| - 0.21 10.8 3.2 0.43 9.8 2.2 1.6 1 0 0 1 1 1 0 zinc-ribbon domain zf-H2C2_2 PF13465.1 gi|154151932|ref|YP_001405550.1| - 0.45 10.9 2.7 7.5 7.0 0.2 2.4 2 0 0 2 2 2 0 Zinc-finger double domain zf-C2H2 PF00096.21 gi|154151932|ref|YP_001405550.1| - 1 9.8 5.1 4.1 7.9 0.8 2.4 2 0 0 2 2 2 0 Zinc finger, C2H2 type Zn-ribbon_8 PF09723.5 gi|154151932|ref|YP_001405550.1| - 2.9 7.9 7.2 54 3.8 5.0 2.3 1 1 0 1 1 1 0 Zinc ribbon domain Pribosyltran PF00156.22 gi|154151933|ref|YP_001405551.1| - 1.3e-20 73.4 0.1 1.7e-20 72.9 0.1 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain HTH_23 PF13384.1 gi|154151933|ref|YP_001405551.1| - 0.00057 19.4 0.0 0.0052 16.4 0.0 2.3 3 0 0 3 3 3 1 Homeodomain-like domain UPRTase PF14681.1 gi|154151933|ref|YP_001405551.1| - 0.0014 17.8 0.1 0.0019 17.4 0.0 1.2 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase HTH_7 PF02796.10 gi|154151933|ref|YP_001405551.1| - 0.0026 17.6 0.0 0.0059 16.4 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase PRTase_2 PF15609.1 gi|154151933|ref|YP_001405551.1| - 0.015 14.6 0.0 0.02 14.1 0.0 1.3 1 0 0 1 1 1 0 Phosphoribosyl transferase GerE PF00196.14 gi|154151933|ref|YP_001405551.1| - 0.055 12.7 0.0 0.11 11.8 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_29 PF13551.1 gi|154151933|ref|YP_001405551.1| - 0.071 13.2 0.0 0.17 12.0 0.0 1.6 2 0 0 2 2 2 0 Winged helix-turn helix Cpn60_TCP1 PF00118.19 gi|154151934|ref|YP_001405552.1| - 1.1e-149 499.1 12.5 1.3e-149 498.9 8.6 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family DUF2443 PF10398.4 gi|154151934|ref|YP_001405552.1| - 0.062 13.1 0.1 0.19 11.5 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2443) Glyco_trans_1_3 PF13528.1 gi|154151936|ref|YP_001405554.1| - 8.5e-11 41.5 0.0 7.8e-10 38.4 0.0 1.9 1 1 0 1 1 1 1 Glycosyl transferase family 1 Glyco_tran_28_C PF04101.11 gi|154151936|ref|YP_001405554.1| - 0.0016 18.1 0.0 0.0027 17.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain DUF1952 PF09189.5 gi|154151938|ref|YP_001405556.1| - 0.023 14.3 0.1 0.033 13.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1952) PhoU PF01895.14 gi|154151939|ref|YP_001405557.1| - 3.2e-20 72.3 6.9 5.4e-17 62.0 0.8 2.3 2 0 0 2 2 2 2 PhoU domain Antitoxin-MazE PF04014.13 gi|154151939|ref|YP_001405557.1| - 4.9e-09 35.7 0.0 1.1e-08 34.6 0.0 1.6 1 0 0 1 1 1 1 Antidote-toxin recognition MazE LMWPc PF01451.16 gi|154151940|ref|YP_001405558.1| - 1e-22 80.9 0.0 1.2e-22 80.7 0.0 1.1 1 0 0 1 1 1 1 Low molecular weight phosphotyrosine protein phosphatase DUF872 PF05915.7 gi|154151941|ref|YP_001405559.1| - 0.022 14.6 1.7 0.024 14.4 1.2 1.1 1 0 0 1 1 1 0 Eukaryotic protein of unknown function (DUF872) DUF2892 PF11127.3 gi|154151941|ref|YP_001405559.1| - 0.062 13.1 1.1 0.075 12.8 0.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2892) DUF898 PF05987.8 gi|154151941|ref|YP_001405559.1| - 0.086 11.7 4.8 0.09 11.6 3.3 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF898) TPPK_C PF12555.3 gi|154151941|ref|YP_001405559.1| - 0.091 12.5 0.6 0.091 12.5 0.4 2.0 2 0 0 2 2 2 0 Thiamine pyrophosphokinase C terminal DUF1212 PF06738.7 gi|154151941|ref|YP_001405559.1| - 0.18 11.2 2.5 0.19 11.2 1.7 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1212) SdpI PF13630.1 gi|154151941|ref|YP_001405559.1| - 0.72 9.5 5.2 0.91 9.2 3.6 1.1 1 0 0 1 1 1 0 SdpI/YhfL protein family Claudin_2 PF13903.1 gi|154151941|ref|YP_001405559.1| - 1 9.0 4.1 1.1 8.9 2.8 1.1 1 0 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction IncA PF04156.9 gi|154151941|ref|YP_001405559.1| - 1.9 8.0 6.7 2.6 7.5 0.1 2.0 2 0 0 2 2 2 0 IncA protein DUF4282 PF14110.1 gi|154151941|ref|YP_001405559.1| - 4.3 7.6 7.8 1.5 9.0 0.9 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4282) S1FA PF04689.8 gi|154151942|ref|YP_001405560.1| - 0.12 12.2 0.0 0.12 12.2 0.0 2.6 3 0 0 3 3 3 0 DNA binding protein S1FA VSP PF03302.8 gi|154151942|ref|YP_001405560.1| - 0.21 10.2 0.4 0.37 9.3 0.3 1.3 1 0 0 1 1 1 0 Giardia variant-specific surface protein PsaL PF02605.10 gi|154151942|ref|YP_001405560.1| - 2.5 7.6 5.2 2.2 7.7 0.1 2.6 1 1 2 3 3 3 0 Photosystem I reaction centre subunit XI T2SF PF00482.18 gi|154151943|ref|YP_001405561.1| - 7.6e-14 51.6 0.1 7.6e-14 51.6 0.1 1.9 2 0 0 2 2 2 1 Type II secretion system (T2SS), protein F ABC2_membrane_5 PF13346.1 gi|154151943|ref|YP_001405561.1| - 2.3 7.4 16.9 0.98 8.6 2.6 2.2 2 0 0 2 2 2 0 ABC-2 family transporter protein T2SF PF00482.18 gi|154151944|ref|YP_001405562.1| - 9.4e-12 44.9 0.9 9.4e-12 44.9 0.6 2.2 2 0 0 2 2 2 1 Type II secretion system (T2SS), protein F Big_1 PF02369.11 gi|154151944|ref|YP_001405562.1| - 9.5e-06 25.4 4.5 2.4e-05 24.1 3.1 1.7 1 0 0 1 1 1 1 Bacterial Ig-like domain (group 1) CarboxypepD_reg PF13620.1 gi|154151944|ref|YP_001405562.1| - 0.0075 16.2 3.7 0.024 14.6 2.6 1.9 1 0 0 1 1 1 1 Carboxypeptidase regulatory-like domain DUF420 PF04238.7 gi|154151944|ref|YP_001405562.1| - 0.023 14.6 2.5 0.11 12.4 0.2 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF420) TMEM154 PF15102.1 gi|154151944|ref|YP_001405562.1| - 0.046 13.4 0.7 0.2 11.3 0.1 2.3 1 1 0 2 2 2 0 TMEM154 protein family CcmH PF03918.9 gi|154151944|ref|YP_001405562.1| - 0.14 11.1 0.1 0.34 9.9 0.1 1.6 1 0 0 1 1 1 0 Cytochrome C biogenesis protein DPM2 PF07297.7 gi|154151944|ref|YP_001405562.1| - 0.17 12.1 4.3 12 6.2 0.1 2.5 2 0 0 2 2 2 0 Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2) Response_reg PF00072.19 gi|154151946|ref|YP_001405564.1| - 7.7e-25 87.0 0.0 9.5e-25 86.7 0.0 1.1 1 0 0 1 1 1 1 Response regulator receiver domain HisKA_2 PF07568.7 gi|154151947|ref|YP_001405565.1| - 7e-24 83.4 1.8 1.4e-23 82.4 1.2 1.5 1 0 0 1 1 1 1 Histidine kinase HATPase_c PF02518.21 gi|154151947|ref|YP_001405565.1| - 2.3e-07 30.5 0.0 7.5e-07 28.8 0.0 1.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PAS_8 PF13188.1 gi|154151947|ref|YP_001405565.1| - 6.6e-07 28.9 0.0 1.7e-06 27.7 0.0 1.7 1 0 0 1 1 1 1 PAS domain HWE_HK PF07536.9 gi|154151947|ref|YP_001405565.1| - 1.7e-05 25.1 0.2 3.6e-05 24.1 0.1 1.6 1 0 0 1 1 1 1 HWE histidine kinase HATPase_c_2 PF13581.1 gi|154151947|ref|YP_001405565.1| - 6.8e-05 22.6 0.0 0.00013 21.7 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain PAS_9 PF13426.1 gi|154151947|ref|YP_001405565.1| - 7.5e-05 23.0 0.0 0.00025 21.4 0.0 1.9 3 0 0 3 3 3 1 PAS domain PAS PF00989.19 gi|154151947|ref|YP_001405565.1| - 0.00085 19.0 0.0 0.002 17.8 0.0 1.7 1 0 0 1 1 1 1 PAS fold MASE1 PF05231.9 gi|154151947|ref|YP_001405565.1| - 0.069 12.1 7.9 0.11 11.5 5.5 1.2 1 0 0 1 1 1 0 MASE1 DUF4118 PF13493.1 gi|154151947|ref|YP_001405565.1| - 0.11 12.6 12.7 0.24 11.5 8.8 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4118) CHASE4 PF05228.8 gi|154151948|ref|YP_001405566.1| - 4.6e-25 88.0 0.0 1.1e-24 86.8 0.0 1.7 2 0 0 2 2 2 1 CHASE4 domain HATPase_c PF02518.21 gi|154151948|ref|YP_001405566.1| - 8.1e-19 67.3 0.0 1.8e-18 66.2 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HAMP PF00672.20 gi|154151948|ref|YP_001405566.1| - 8.6e-09 35.4 0.5 8.6e-09 35.4 0.3 1.9 2 0 0 2 2 2 1 HAMP domain HisKA PF00512.20 gi|154151948|ref|YP_001405566.1| - 0.00071 19.5 0.3 0.0047 16.8 0.0 2.4 3 0 0 3 3 3 1 His Kinase A (phospho-acceptor) domain HATPase_c_2 PF13581.1 gi|154151948|ref|YP_001405566.1| - 0.003 17.3 0.0 0.0069 16.1 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-like ATPase domain HATPase_c_3 PF13589.1 gi|154151948|ref|YP_001405566.1| - 0.011 15.4 0.0 0.022 14.3 0.0 1.5 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IncA PF04156.9 gi|154151948|ref|YP_001405566.1| - 9.4 5.7 10.4 0.048 13.2 0.8 1.9 2 0 0 2 2 2 0 IncA protein KaiC PF06745.8 gi|154151949|ref|YP_001405567.1| - 1.7e-09 37.1 0.0 0.00014 21.0 0.0 2.1 2 0 0 2 2 2 2 KaiC GvpD PF07088.6 gi|154151949|ref|YP_001405567.1| - 0.0058 15.0 0.1 0.0097 14.2 0.0 1.4 2 0 0 2 2 2 1 GvpD gas vesicle protein Adeno_E3_CR2 PF02439.10 gi|154151950|ref|YP_001405568.1| - 0.065 12.7 5.3 0.19 11.2 0.2 2.5 2 0 0 2 2 2 0 Adenovirus E3 region protein CR2 Ion_trans PF00520.26 gi|154151950|ref|YP_001405568.1| - 0.47 9.6 6.3 0.55 9.4 4.4 1.1 1 0 0 1 1 1 0 Ion transport protein DUF202 PF02656.10 gi|154151950|ref|YP_001405568.1| - 2.4 8.4 9.9 0.95 9.7 1.4 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF202) Flagellar_rod PF05149.7 gi|154151952|ref|YP_001405570.1| - 0.017 14.3 0.1 0.024 13.8 0.0 1.1 1 0 0 1 1 1 0 Paraflagellar rod protein Polysacc_synt_C PF14667.1 gi|154151953|ref|YP_001405571.1| - 0.0027 17.5 0.0 0.0033 17.2 0.0 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis C-terminal domain 2TM PF13239.1 gi|154151953|ref|YP_001405571.1| - 0.0032 17.4 0.4 0.0045 17.0 0.3 1.2 1 0 0 1 1 1 1 2TM domain Na_Ca_ex PF01699.19 gi|154151953|ref|YP_001405571.1| - 0.0066 16.0 0.8 0.008 15.7 0.5 1.1 1 0 0 1 1 1 1 Sodium/calcium exchanger protein DUF2910 PF11139.3 gi|154151953|ref|YP_001405571.1| - 0.014 14.5 0.0 0.017 14.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2910) DUF2269 PF10027.4 gi|154151953|ref|YP_001405571.1| - 0.015 15.1 0.0 0.017 14.8 0.0 1.1 1 0 0 1 1 1 0 Predicted integral membrane protein (DUF2269) DUF4381 PF14316.1 gi|154151953|ref|YP_001405571.1| - 0.019 15.0 0.2 0.028 14.5 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) DUF4131 PF13567.1 gi|154151953|ref|YP_001405571.1| - 0.076 12.4 0.3 0.089 12.1 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4131) ABC2_membrane_4 PF12730.2 gi|154151953|ref|YP_001405571.1| - 0.08 12.0 4.6 0.098 11.8 3.2 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein DUF973 PF06157.6 gi|154151953|ref|YP_001405571.1| - 0.13 11.1 0.0 0.16 10.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF973) Tetraspannin PF00335.15 gi|154151953|ref|YP_001405571.1| - 0.17 11.1 0.9 0.2 10.9 0.6 1.1 1 0 0 1 1 1 0 Tetraspanin family Exo_endo_phos PF03372.18 gi|154151954|ref|YP_001405572.1| - 2.4e-24 86.6 0.2 2.9e-24 86.3 0.2 1.1 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.1 gi|154151954|ref|YP_001405572.1| - 2.5e-09 36.7 0.0 4.5e-09 35.9 0.0 1.4 1 1 0 1 1 1 1 Endonuclease-reverse transcriptase PBP_like_2 PF12849.2 gi|154151955|ref|YP_001405573.1| - 1.3e-20 73.9 23.0 1.9e-20 73.4 15.4 1.6 1 1 0 1 1 1 1 PBP superfamily domain PBP_like PF12727.2 gi|154151955|ref|YP_001405573.1| - 4.1e-07 29.1 0.2 1.2e-06 27.5 0.1 1.8 1 1 0 1 1 1 1 PBP superfamily domain Cleaved_Adhesin PF07675.6 gi|154151955|ref|YP_001405573.1| - 0.03 13.9 0.8 0.03 13.9 0.5 1.9 2 0 0 2 2 2 0 Cleaved Adhesin Domain DUF1215 PF06744.7 gi|154151955|ref|YP_001405573.1| - 0.043 13.4 0.3 0.18 11.4 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1215) DUF1628 PF07790.6 gi|154151955|ref|YP_001405573.1| - 0.049 14.3 6.1 0.18 12.5 4.2 2.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1628) BPD_transp_1 PF00528.17 gi|154151956|ref|YP_001405574.1| - 3.9e-23 81.9 18.4 3.9e-23 81.9 12.7 2.2 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF502 PF04367.8 gi|154151956|ref|YP_001405574.1| - 0.054 13.2 1.9 7 6.4 0.1 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF502) BPD_transp_1 PF00528.17 gi|154151957|ref|YP_001405575.1| - 3.3e-24 85.4 11.6 3.3e-24 85.4 8.0 3.9 2 2 2 4 4 4 1 Binding-protein-dependent transport system inner membrane component Lamp PF01299.12 gi|154151957|ref|YP_001405575.1| - 0.78 8.8 6.5 0.044 12.9 0.2 2.0 2 0 0 2 2 2 0 Lysosome-associated membrane glycoprotein (Lamp) Halogen_Hydrol PF10112.4 gi|154151957|ref|YP_001405575.1| - 2.2 7.6 0.0 2.2 7.6 0.0 3.1 3 0 0 3 3 3 0 5-bromo-4-chloroindolyl phosphate hydrolysis protein PKD PF00801.15 gi|154151958|ref|YP_001405576.1| - 8.2e-39 131.1 25.2 2.2e-16 59.3 1.8 4.5 4 0 0 4 4 4 3 PKD domain A2M_N PF01835.14 gi|154151958|ref|YP_001405576.1| - 0.093 12.9 0.3 4 7.7 0.0 2.8 3 0 0 3 3 3 0 MG2 domain PGPGW PF09656.5 gi|154151958|ref|YP_001405576.1| - 0.85 8.9 3.8 1.7 7.9 2.7 1.5 1 0 0 1 1 1 0 Putative transmembrane protein (PGPGW) PKD PF00801.15 gi|154151960|ref|YP_001405578.1| - 4.1e-41 138.5 47.7 1.7e-11 43.6 3.3 4.6 4 0 0 4 4 4 4 PKD domain DUF2793 PF10983.3 gi|154151960|ref|YP_001405578.1| - 0.0051 16.5 1.5 1.4 8.7 0.1 2.7 2 0 0 2 2 2 2 Protein of unknown function (DUF2793) Cadherin PF00028.12 gi|154151960|ref|YP_001405578.1| - 0.32 11.2 1.9 1.4e+02 2.7 0.1 4.0 4 0 0 4 4 4 0 Cadherin domain T2SE PF00437.15 gi|154151961|ref|YP_001405579.1| - 3.3e-39 134.4 0.0 5.2e-39 133.7 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_17 PF13207.1 gi|154151961|ref|YP_001405579.1| - 0.024 15.4 0.4 0.12 13.1 0.0 2.3 3 0 0 3 3 3 0 AAA domain Sigma70_r1_1 PF03979.9 gi|154151961|ref|YP_001405579.1| - 0.11 12.4 0.4 0.3 11.0 0.3 1.7 1 0 0 1 1 1 0 Sigma-70 factor, region 1.1 DUF1628 PF07790.6 gi|154151962|ref|YP_001405580.1| - 1.8e-06 28.6 1.6 8.2e-06 26.4 0.5 2.6 2 0 0 2 2 2 1 Protein of unknown function (DUF1628) Big_1 PF02369.11 gi|154151962|ref|YP_001405580.1| - 0.00022 21.0 0.5 0.00022 21.0 0.3 2.8 3 0 0 3 3 3 1 Bacterial Ig-like domain (group 1) DUF824 PF05688.6 gi|154151962|ref|YP_001405580.1| - 0.0054 16.3 2.2 0.044 13.4 0.2 2.8 2 0 0 2 2 2 1 Salmonella repeat of unknown function (DUF824) MarB PF13999.1 gi|154151962|ref|YP_001405580.1| - 0.13 11.8 2.2 8.2 6.0 0.5 2.6 2 0 0 2 2 2 0 MarB protein Cupredoxin_1 PF13473.1 gi|154151963|ref|YP_001405581.1| - 5.2e-11 42.3 0.0 6.5e-11 42.0 0.0 1.4 1 1 0 1 1 1 1 Cupredoxin-like domain Copper-bind PF00127.15 gi|154151963|ref|YP_001405581.1| - 8.9e-10 38.6 1.1 1.7e-08 34.5 0.8 2.1 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Med3 PF11593.3 gi|154151963|ref|YP_001405581.1| - 4 6.5 6.4 4.6 6.3 4.5 1.1 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal DEAD PF00270.24 gi|154151964|ref|YP_001405582.1| - 5.6e-28 97.5 0.0 1.1e-26 93.3 0.0 2.2 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|154151964|ref|YP_001405582.1| - 1.3e-12 47.3 0.0 3e-12 46.2 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|154151964|ref|YP_001405582.1| - 0.043 13.6 0.0 0.11 12.3 0.0 1.7 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit DEAD_assoc PF08494.6 gi|154151964|ref|YP_001405582.1| - 0.069 12.8 0.1 0.24 11.0 0.0 1.9 2 0 0 2 2 2 0 DEAD/H associated Pterin_4a PF01329.14 gi|154151965|ref|YP_001405583.1| - 6.1e-22 77.1 0.0 7.8e-22 76.8 0.0 1.1 1 0 0 1 1 1 1 Pterin 4 alpha carbinolamine dehydratase AAA PF00004.24 gi|154151966|ref|YP_001405584.1| - 1.8e-97 322.6 0.0 2.3e-49 166.9 0.0 2.4 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) CDC48_N PF02359.13 gi|154151966|ref|YP_001405584.1| - 1.6e-25 88.8 0.0 9.7e-25 86.3 0.0 2.4 2 0 0 2 2 1 1 Cell division protein 48 (CDC48), N-terminal domain RuvB_N PF05496.7 gi|154151966|ref|YP_001405584.1| - 8.2e-15 54.4 0.0 1e-06 27.9 0.0 2.9 2 2 1 3 3 3 2 Holliday junction DNA helicase ruvB N-terminus AAA_16 PF13191.1 gi|154151966|ref|YP_001405584.1| - 5.1e-13 49.4 0.0 1e-06 28.8 0.0 3.0 2 0 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.1 gi|154151966|ref|YP_001405584.1| - 1e-11 45.0 2.2 0.001 19.2 0.1 4.8 3 2 0 3 3 2 2 AAA domain AAA_5 PF07728.9 gi|154151966|ref|YP_001405584.1| - 1.5e-11 44.2 0.6 0.00031 20.4 0.0 3.8 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_17 PF13207.1 gi|154151966|ref|YP_001405584.1| - 6.6e-11 43.0 0.2 0.00034 21.4 0.0 3.4 2 2 0 2 2 2 2 AAA domain AAA_2 PF07724.9 gi|154151966|ref|YP_001405584.1| - 1e-10 41.7 0.0 7e-05 22.7 0.0 3.0 3 1 0 3 3 2 2 AAA domain (Cdc48 subfamily) TIP49 PF06068.8 gi|154151966|ref|YP_001405584.1| - 5.5e-10 38.5 0.0 0.00063 18.5 0.0 2.8 3 0 0 3 3 3 2 TIP49 C-terminus CDC48_2 PF02933.12 gi|154151966|ref|YP_001405584.1| - 5.8e-10 38.6 0.8 5.1e-09 35.6 0.2 2.9 3 0 0 3 3 1 1 Cell division protein 48 (CDC48), domain 2 AAA_33 PF13671.1 gi|154151966|ref|YP_001405584.1| - 1.1e-09 38.2 0.0 0.0015 18.3 0.0 3.2 3 0 0 3 3 2 2 AAA domain AAA_14 PF13173.1 gi|154151966|ref|YP_001405584.1| - 1.9e-09 37.5 0.0 0.00037 20.4 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_19 PF13245.1 gi|154151966|ref|YP_001405584.1| - 5e-09 35.7 1.0 0.0059 16.3 0.1 3.5 3 0 0 3 3 2 2 Part of AAA domain IstB_IS21 PF01695.12 gi|154151966|ref|YP_001405584.1| - 5.9e-08 32.3 0.3 0.011 15.1 0.0 2.5 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_18 PF13238.1 gi|154151966|ref|YP_001405584.1| - 9.3e-08 32.4 0.0 0.019 15.2 0.0 2.7 2 0 0 2 2 2 2 AAA domain AAA_28 PF13521.1 gi|154151966|ref|YP_001405584.1| - 4.3e-07 30.0 0.0 0.012 15.5 0.0 2.6 2 0 0 2 2 2 2 AAA domain Zeta_toxin PF06414.7 gi|154151966|ref|YP_001405584.1| - 4.9e-07 29.0 0.1 0.046 12.8 0.0 3.0 3 0 0 3 3 3 2 Zeta toxin Sigma54_activ_2 PF14532.1 gi|154151966|ref|YP_001405584.1| - 9.4e-07 28.9 0.0 0.024 14.6 0.0 2.5 2 0 0 2 2 2 2 Sigma-54 interaction domain Mg_chelatase PF01078.16 gi|154151966|ref|YP_001405584.1| - 1.6e-06 27.4 0.6 0.051 12.7 0.0 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_25 PF13481.1 gi|154151966|ref|YP_001405584.1| - 2e-06 27.3 7.6 0.87 8.9 0.1 4.6 2 2 0 3 3 3 3 AAA domain RNA_helicase PF00910.17 gi|154151966|ref|YP_001405584.1| - 1.3e-05 25.2 0.0 0.11 12.6 0.0 2.7 2 0 0 2 2 2 2 RNA helicase Sigma54_activat PF00158.21 gi|154151966|ref|YP_001405584.1| - 1.4e-05 24.6 0.0 0.31 10.4 0.0 3.6 3 1 0 3 3 3 2 Sigma-54 interaction domain KaiC PF06745.8 gi|154151966|ref|YP_001405584.1| - 1.7e-05 24.0 1.8 0.41 9.7 0.0 3.9 3 1 0 4 4 4 2 KaiC PhoH PF02562.11 gi|154151966|ref|YP_001405584.1| - 5e-05 22.6 0.6 0.31 10.2 0.0 2.8 2 0 0 2 2 2 2 PhoH-like protein AAA_3 PF07726.6 gi|154151966|ref|YP_001405584.1| - 5.9e-05 22.6 0.0 0.57 9.7 0.0 3.3 3 0 0 3 3 3 2 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.1 gi|154151966|ref|YP_001405584.1| - 6.5e-05 22.6 0.1 0.15 11.6 0.0 2.5 2 0 0 2 2 2 2 AAA domain Parvo_NS1 PF01057.12 gi|154151966|ref|YP_001405584.1| - 0.00024 20.0 0.1 0.32 9.8 0.0 2.3 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 ABC_tran PF00005.22 gi|154151966|ref|YP_001405584.1| - 0.00032 20.9 0.0 0.91 9.8 0.0 2.7 2 0 0 2 2 2 2 ABC transporter DUF815 PF05673.8 gi|154151966|ref|YP_001405584.1| - 0.00039 19.4 0.0 0.28 10.0 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF815) ATP-synt_ab PF00006.20 gi|154151966|ref|YP_001405584.1| - 0.0005 19.6 0.0 1.4 8.3 0.0 2.7 3 0 0 3 3 3 2 ATP synthase alpha/beta family, nucleotide-binding domain SKI PF01202.17 gi|154151966|ref|YP_001405584.1| - 0.00084 19.2 0.0 0.94 9.3 0.0 2.7 2 0 0 2 2 2 1 Shikimate kinase AAA_11 PF13086.1 gi|154151966|ref|YP_001405584.1| - 0.0013 18.3 0.0 1.8 8.0 0.0 2.4 2 0 0 2 2 2 2 AAA domain Arch_ATPase PF01637.13 gi|154151966|ref|YP_001405584.1| - 0.0013 18.4 0.3 0.58 9.8 0.0 3.6 2 2 0 2 2 2 1 Archaeal ATPase Cytidylate_kin2 PF13189.1 gi|154151966|ref|YP_001405584.1| - 0.0017 18.3 0.0 0.28 11.0 0.0 2.5 2 0 0 2 2 2 1 Cytidylate kinase-like family NB-ARC PF00931.17 gi|154151966|ref|YP_001405584.1| - 0.0019 17.1 0.0 0.52 9.1 0.0 2.4 2 0 0 2 2 2 1 NB-ARC domain DUF2075 PF09848.4 gi|154151966|ref|YP_001405584.1| - 0.0019 17.2 0.0 0.75 8.7 0.0 2.3 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) IPT PF01745.11 gi|154151966|ref|YP_001405584.1| - 0.002 17.3 0.3 1.6 7.8 0.0 2.3 2 0 0 2 2 2 2 Isopentenyl transferase NACHT PF05729.7 gi|154151966|ref|YP_001405584.1| - 0.0022 17.6 0.9 6.7 6.3 0.0 4.1 4 0 0 4 4 4 0 NACHT domain ResIII PF04851.10 gi|154151966|ref|YP_001405584.1| - 0.006 16.4 0.0 4.2 7.1 0.0 2.4 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit UPF0079 PF02367.12 gi|154151966|ref|YP_001405584.1| - 0.0067 16.0 0.1 3.3 7.3 0.0 2.5 2 0 0 2 2 2 0 Uncharacterised P-loop hydrolase UPF0079 AAA_30 PF13604.1 gi|154151966|ref|YP_001405584.1| - 0.017 14.6 1.3 5.2 6.5 0.0 2.9 3 0 0 3 3 3 0 AAA domain DUF927 PF06048.6 gi|154151966|ref|YP_001405584.1| - 0.017 14.3 0.0 4.1 6.5 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF927) NTPase_1 PF03266.10 gi|154151966|ref|YP_001405584.1| - 0.02 14.6 1.4 11 5.6 0.0 3.6 2 2 1 3 3 3 0 NTPase Guanylate_kin PF00625.16 gi|154151966|ref|YP_001405584.1| - 0.039 13.4 0.3 40 3.5 0.0 3.8 3 1 1 4 4 4 0 Guanylate kinase AAA_23 PF13476.1 gi|154151966|ref|YP_001405584.1| - 0.056 13.7 0.0 13 6.0 0.0 2.7 2 0 0 2 2 2 0 AAA domain KAP_NTPase PF07693.9 gi|154151966|ref|YP_001405584.1| - 0.12 11.3 0.0 3.2 6.6 0.0 2.7 2 1 0 3 3 3 0 KAP family P-loop domain KTI12 PF08433.5 gi|154151966|ref|YP_001405584.1| - 0.19 10.8 0.1 23 4.0 0.0 2.6 2 0 0 2 2 2 0 Chromatin associated protein KTI12 DUF111 PF01969.12 gi|154151967|ref|YP_001405585.1| - 4.3e-117 391.1 0.1 4.8e-117 390.9 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF111 FGase PF05013.7 gi|154151967|ref|YP_001405585.1| - 0.032 14.1 0.3 0.059 13.2 0.2 1.5 1 0 0 1 1 1 0 N-formylglutamate amidohydrolase Rad51 PF08423.6 gi|154151968|ref|YP_001405586.1| - 1.5e-21 76.4 0.0 1.9e-21 76.1 0.0 1.1 1 0 0 1 1 1 1 Rad51 KaiC PF06745.8 gi|154151968|ref|YP_001405586.1| - 2.3e-12 46.5 0.0 3.9e-12 45.7 0.0 1.4 1 1 0 1 1 1 1 KaiC AAA_25 PF13481.1 gi|154151968|ref|YP_001405586.1| - 7.4e-12 45.0 0.0 1e-11 44.6 0.0 1.2 1 0 0 1 1 1 1 AAA domain RecA PF00154.16 gi|154151968|ref|YP_001405586.1| - 4.1e-09 35.9 0.0 4.3e-09 35.8 0.0 1.1 1 0 0 1 1 1 1 recA bacterial DNA recombination protein Zot PF05707.7 gi|154151968|ref|YP_001405586.1| - 5.7e-05 22.6 0.0 7e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 Zonular occludens toxin (Zot) AAA PF00004.24 gi|154151968|ref|YP_001405586.1| - 0.014 15.6 0.0 0.043 14.0 0.0 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.1 gi|154151968|ref|YP_001405586.1| - 0.11 12.0 0.0 0.15 11.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain PAS_9 PF13426.1 gi|154151969|ref|YP_001405587.1| - 3.3e-78 258.7 0.0 3.7e-17 62.6 0.0 6.3 6 0 0 6 6 6 6 PAS domain PAS PF00989.19 gi|154151969|ref|YP_001405587.1| - 6.3e-61 203.1 0.0 3.2e-13 49.4 0.0 6.3 6 0 0 6 6 6 6 PAS fold PAS_4 PF08448.5 gi|154151969|ref|YP_001405587.1| - 1.1e-60 202.4 0.3 1.9e-18 66.4 0.0 6.3 6 0 0 6 6 6 6 PAS fold PAS_8 PF13188.1 gi|154151969|ref|YP_001405587.1| - 2e-43 144.8 0.6 3.6e-08 32.9 0.0 6.5 6 0 0 6 6 6 6 PAS domain PAS_3 PF08447.6 gi|154151969|ref|YP_001405587.1| - 3.7e-33 113.4 0.0 1.5e-15 57.0 0.0 5.6 6 1 0 6 6 6 4 PAS fold PAS_7 PF12860.2 gi|154151969|ref|YP_001405587.1| - 4.3e-09 36.3 0.1 0.04 13.9 0.0 6.4 6 0 0 6 6 6 2 PAS fold PAS_10 PF13596.1 gi|154151969|ref|YP_001405587.1| - 1.1e-05 25.6 0.0 0.21 11.8 0.0 4.4 3 1 2 5 5 5 1 PAS domain DUF2111 PF09884.4 gi|154151969|ref|YP_001405587.1| - 0.00018 21.2 0.0 0.32 10.8 0.0 3.2 3 0 0 3 3 3 2 Uncharacterized protein conserved in archaea (DUF2111) HTH_IclR PF09339.5 gi|154151969|ref|YP_001405587.1| - 0.00025 20.5 0.0 0.0027 17.2 0.0 2.4 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_23 PF13384.1 gi|154151969|ref|YP_001405587.1| - 0.04 13.5 0.1 0.11 12.1 0.1 1.8 1 0 0 1 1 1 0 Homeodomain-like domain DAP_epimerase PF01678.14 gi|154151970|ref|YP_001405588.1| - 1.9e-58 195.6 0.4 1.1e-31 109.2 0.0 2.0 2 0 0 2 2 2 2 Diaminopimelate epimerase PhzC-PhzF PF02567.11 gi|154151970|ref|YP_001405588.1| - 1.5e-05 24.3 0.0 3.4e-05 23.1 0.0 1.5 1 1 0 1 1 1 1 Phenazine biosynthesis-like protein Pro_racemase PF05544.6 gi|154151970|ref|YP_001405588.1| - 7.6e-05 21.6 0.0 0.025 13.4 0.0 2.1 2 0 0 2 2 2 2 Proline racemase Response_reg PF00072.19 gi|154151970|ref|YP_001405588.1| - 0.04 13.9 0.0 0.44 10.5 0.0 2.1 2 0 0 2 2 2 0 Response regulator receiver domain IF-2B PF01008.12 gi|154151971|ref|YP_001405589.1| - 4.3e-81 271.9 1.8 4.9e-81 271.8 1.2 1.0 1 0 0 1 1 1 1 Initiation factor 2 subunit family DeoRC PF00455.17 gi|154151971|ref|YP_001405589.1| - 0.013 15.1 4.2 0.39 10.3 0.1 2.8 3 0 0 3 3 3 0 DeoR C terminal sensor domain Hydrolase PF00702.21 gi|154151972|ref|YP_001405590.1| - 1.9e-17 64.4 0.2 3.9e-17 63.3 0.1 1.5 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.2 gi|154151972|ref|YP_001405590.1| - 7.1e-13 49.1 0.0 1e-12 48.6 0.0 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.1 gi|154151972|ref|YP_001405590.1| - 5.5e-06 26.7 0.0 4.2e-05 23.8 0.0 2.1 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.7 gi|154151972|ref|YP_001405590.1| - 0.0079 15.8 0.0 0.17 11.4 0.0 2.4 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.1 gi|154151972|ref|YP_001405590.1| - 0.12 12.3 0.0 1.1 9.2 0.0 2.3 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase ABC_tran PF00005.22 gi|154151973|ref|YP_001405591.1| - 1.8e-55 186.9 0.0 6.3e-30 104.2 0.0 2.3 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.1 gi|154151973|ref|YP_001405591.1| - 2.6e-09 37.4 0.6 0.074 12.9 0.3 4.1 3 1 1 4 4 4 2 AAA domain DUF258 PF03193.11 gi|154151973|ref|YP_001405591.1| - 3e-06 26.4 0.1 0.056 12.6 0.0 2.3 2 0 0 2 2 2 2 Protein of unknown function, DUF258 AAA_16 PF13191.1 gi|154151973|ref|YP_001405591.1| - 8.5e-06 25.8 0.9 0.15 12.0 0.1 3.1 2 2 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.1 gi|154151973|ref|YP_001405591.1| - 4.6e-05 22.8 0.2 0.088 12.3 0.0 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain SMC_N PF02463.14 gi|154151973|ref|YP_001405591.1| - 5.6e-05 22.4 2.7 0.035 13.3 0.0 3.9 3 1 0 4 4 4 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.1 gi|154151973|ref|YP_001405591.1| - 5.9e-05 23.2 0.6 0.79 9.8 0.0 3.3 2 2 0 2 2 2 2 AAA domain AAA_23 PF13476.1 gi|154151973|ref|YP_001405591.1| - 8.9e-05 22.9 0.5 0.028 14.7 0.0 2.3 2 0 0 2 2 2 1 AAA domain Miro PF08477.8 gi|154151973|ref|YP_001405591.1| - 0.00014 22.3 0.1 1.2 9.6 0.0 3.1 2 1 0 2 2 2 2 Miro-like protein ATP-synt_ab PF00006.20 gi|154151973|ref|YP_001405591.1| - 0.0003 20.3 0.0 0.65 9.4 0.0 2.5 1 1 1 2 2 2 2 ATP synthase alpha/beta family, nucleotide-binding domain SbcCD_C PF13558.1 gi|154151973|ref|YP_001405591.1| - 0.00035 20.4 0.0 0.82 9.6 0.0 3.3 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit PduV-EutP PF10662.4 gi|154151973|ref|YP_001405591.1| - 0.0005 19.5 0.1 0.16 11.4 0.0 2.7 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation AAA_19 PF13245.1 gi|154151973|ref|YP_001405591.1| - 0.0008 19.1 0.0 1.3 8.7 0.0 3.5 3 0 0 3 3 2 1 Part of AAA domain AAA_17 PF13207.1 gi|154151973|ref|YP_001405591.1| - 0.0009 20.0 4.0 0.023 15.4 0.2 2.9 2 1 0 2 2 2 1 AAA domain NB-ARC PF00931.17 gi|154151973|ref|YP_001405591.1| - 0.0033 16.3 0.7 1.9 7.2 0.1 2.5 2 0 0 2 2 2 2 NB-ARC domain MobB PF03205.9 gi|154151973|ref|YP_001405591.1| - 0.0039 16.9 0.4 0.57 9.8 0.0 2.5 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_10 PF12846.2 gi|154151973|ref|YP_001405591.1| - 0.0041 16.6 3.5 6.9 6.0 0.1 3.4 3 0 0 3 3 3 0 AAA-like domain UPF0079 PF02367.12 gi|154151973|ref|YP_001405591.1| - 0.0047 16.5 0.2 2.9 7.5 0.0 2.4 2 0 0 2 2 2 1 Uncharacterised P-loop hydrolase UPF0079 PhoH PF02562.11 gi|154151973|ref|YP_001405591.1| - 0.0069 15.6 0.1 1.7 7.8 0.0 2.5 2 0 0 2 2 2 1 PhoH-like protein AAA_25 PF13481.1 gi|154151973|ref|YP_001405591.1| - 0.0079 15.6 0.1 2.8 7.3 0.0 2.9 3 0 0 3 3 2 1 AAA domain PRK PF00485.13 gi|154151973|ref|YP_001405591.1| - 0.019 14.5 0.1 1.5 8.3 0.0 2.4 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family AAA_30 PF13604.1 gi|154151973|ref|YP_001405591.1| - 0.022 14.3 0.0 4.1 6.9 0.0 2.6 2 0 0 2 2 2 0 AAA domain DUF87 PF01935.12 gi|154151973|ref|YP_001405591.1| - 0.028 14.2 1.7 3.3 7.4 0.1 3.2 3 0 0 3 3 3 0 Domain of unknown function DUF87 IstB_IS21 PF01695.12 gi|154151973|ref|YP_001405591.1| - 0.028 13.8 0.2 5.7 6.3 0.0 3.1 3 0 0 3 3 3 0 IstB-like ATP binding protein NACHT PF05729.7 gi|154151973|ref|YP_001405591.1| - 0.031 13.9 1.7 3.7 7.1 0.1 3.1 3 0 0 3 3 3 0 NACHT domain zf-IS66 PF13005.2 gi|154151973|ref|YP_001405591.1| - 0.037 13.9 0.9 3.2 7.8 0.0 3.2 3 0 0 3 3 3 0 zinc-finger binding domain of transposase IS66 AAA_13 PF13166.1 gi|154151973|ref|YP_001405591.1| - 0.048 12.1 0.1 0.87 7.9 0.0 2.4 3 0 0 3 3 3 0 AAA domain AAA_33 PF13671.1 gi|154151973|ref|YP_001405591.1| - 0.056 13.3 0.2 3.8 7.3 0.0 2.9 2 1 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.18 gi|154151973|ref|YP_001405591.1| - 0.14 12.1 1.7 21 5.0 0.2 3.0 3 1 0 3 3 3 0 50S ribosome-binding GTPase AAA_24 PF13479.1 gi|154151973|ref|YP_001405591.1| - 0.14 11.7 0.5 9.2 5.7 0.1 2.5 2 0 0 2 2 2 0 AAA domain zf-ribbon_3 PF13248.1 gi|154151973|ref|YP_001405591.1| - 0.79 9.0 5.2 1.2 8.4 0.5 2.2 1 1 1 2 2 2 0 zinc-ribbon domain AAA_5 PF07728.9 gi|154151973|ref|YP_001405591.1| - 1.1 8.9 3.6 5.4 6.7 0.0 3.5 4 1 1 5 5 4 0 AAA domain (dynein-related subfamily) AAA_18 PF13238.1 gi|154151973|ref|YP_001405591.1| - 2.1 8.6 7.5 0.54 10.5 0.3 2.9 3 1 0 3 3 2 0 AAA domain Pro_isomerase PF00160.16 gi|154151974|ref|YP_001405592.1| - 8.6e-05 22.7 0.1 9.9 6.3 0.0 4.0 4 0 0 4 4 4 3 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DUF3659 PF12396.3 gi|154151974|ref|YP_001405592.1| - 0.1 12.2 4.2 19 5.0 0.1 3.9 4 0 0 4 4 4 0 Protein of unknown function (DUF3659) DUF2102 PF09875.4 gi|154151975|ref|YP_001405593.1| - 6.1e-42 141.3 0.0 7.7e-42 141.0 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2102) DUF2112 PF09885.4 gi|154151976|ref|YP_001405594.1| - 3.2e-64 214.8 0.0 3.6e-64 214.7 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2112) BcrAD_BadFG PF01869.15 gi|154151977|ref|YP_001405595.1| - 1.2e-58 198.6 3.8 1.6e-58 198.1 2.6 1.2 1 0 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family Peptidase_M22 PF00814.20 gi|154151977|ref|YP_001405595.1| - 0.023 14.1 0.0 7.2 6.0 0.0 2.3 2 0 0 2 2 2 0 Glycoprotease family Cpl-7 PF08230.6 gi|154151977|ref|YP_001405595.1| - 0.03 14.0 0.1 0.99 9.1 0.0 2.5 2 0 0 2 2 2 0 Cpl-7 lysozyme C-terminal domain FtsA PF14450.1 gi|154151977|ref|YP_001405595.1| - 0.043 13.6 2.9 0.6 9.9 2.0 2.8 1 1 0 1 1 1 0 Cell division protein FtsA DUF2113 PF09886.4 gi|154151978|ref|YP_001405596.1| - 4.3e-69 231.4 0.0 4.7e-69 231.3 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2113) Tme5_EGF_like PF09064.5 gi|154151978|ref|YP_001405596.1| - 0.36 10.4 0.1 0.36 10.4 0.0 1.7 2 0 0 2 2 2 0 Thrombomodulin like fifth domain, EGF-like MCR_C PF04609.7 gi|154151979|ref|YP_001405597.1| - 2.3e-109 364.3 6.0 2.7e-109 364.1 4.2 1.0 1 0 0 1 1 1 1 Methyl-coenzyme M reductase operon protein C DUF1732 PF08340.6 gi|154151979|ref|YP_001405597.1| - 0.07 12.9 0.1 0.29 10.9 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF1732) CMD PF02627.15 gi|154151980|ref|YP_001405598.1| - 7.5e-17 60.9 0.0 1.2e-16 60.3 0.0 1.4 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Asn_synthase PF00733.16 gi|154151981|ref|YP_001405599.1| - 7.4e-52 176.3 0.0 1.3e-51 175.5 0.0 1.3 1 0 0 1 1 1 1 Asparagine synthase GATase_7 PF13537.1 gi|154151981|ref|YP_001405599.1| - 7.8e-51 171.0 0.0 1.6e-50 170.0 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.1 gi|154151981|ref|YP_001405599.1| - 4.6e-47 159.3 0.0 1.1e-46 158.1 0.0 1.6 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_2 PF00310.16 gi|154151981|ref|YP_001405599.1| - 2.9e-07 29.5 0.0 0.0026 16.5 0.0 3.1 1 1 2 3 3 3 3 Glutamine amidotransferases class-II DUF3700 PF12481.3 gi|154151981|ref|YP_001405599.1| - 0.0035 16.5 0.1 0.0085 15.3 0.1 1.6 1 1 0 1 1 1 1 Aluminium induced protein MannoseP_isomer PF01050.13 gi|154151982|ref|YP_001405600.1| - 1.5e-64 216.1 0.7 2.5e-64 215.4 0.5 1.4 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase NTP_transferase PF00483.18 gi|154151982|ref|YP_001405600.1| - 4.4e-54 183.3 0.0 3.6e-53 180.3 0.0 2.0 2 0 0 2 2 2 1 Nucleotidyl transferase Cupin_2 PF07883.6 gi|154151982|ref|YP_001405600.1| - 9.4e-13 47.4 0.3 3.1e-12 45.8 0.1 1.9 2 0 0 2 2 2 1 Cupin domain NTP_transf_3 PF12804.2 gi|154151982|ref|YP_001405600.1| - 3.2e-10 40.2 0.0 9.6e-10 38.7 0.0 1.8 2 0 0 2 2 2 1 MobA-like NTP transferase domain AraC_binding PF02311.14 gi|154151982|ref|YP_001405600.1| - 0.03 13.9 0.1 0.059 13.0 0.1 1.4 1 0 0 1 1 1 0 AraC-like ligand binding domain IspD PF01128.14 gi|154151982|ref|YP_001405600.1| - 0.041 13.3 0.0 0.068 12.6 0.0 1.3 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VWA_2 PF13519.1 gi|154151982|ref|YP_001405600.1| - 0.11 12.5 0.0 0.59 10.2 0.0 1.9 2 0 0 2 2 2 0 von Willebrand factor type A domain Radical_SAM_N PF08497.5 gi|154151983|ref|YP_001405601.1| - 2.9e-124 413.8 0.0 3.9e-124 413.4 0.0 1.2 1 0 0 1 1 1 1 Radical SAM N-terminal Radical_SAM PF04055.16 gi|154151983|ref|YP_001405601.1| - 1.1e-17 64.6 0.0 1.6e-17 64.1 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily DUF3362 PF11842.3 gi|154151983|ref|YP_001405601.1| - 3.2e-15 56.3 0.0 5.7e-15 55.5 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF3362) B12-binding PF02310.14 gi|154151983|ref|YP_001405601.1| - 0.0073 16.1 0.1 0.063 13.1 0.0 2.5 2 1 0 2 2 2 1 B12 binding domain DUF296 PF03479.10 gi|154151984|ref|YP_001405602.1| - 2.3e-15 56.2 0.0 2.8e-15 55.9 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF296) DUF2207 PF09972.4 gi|154151985|ref|YP_001405603.1| - 1.3e-100 337.4 0.1 1.8e-100 336.9 0.1 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) DUF1345 PF07077.6 gi|154151985|ref|YP_001405603.1| - 0.013 15.0 0.5 0.027 14.0 0.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1345) LemA PF04011.7 gi|154151986|ref|YP_001405604.1| - 1.5e-56 190.4 0.2 1.8e-56 190.2 0.1 1.0 1 0 0 1 1 1 1 LemA family Chordopox_A13L PF05961.6 gi|154151986|ref|YP_001405604.1| - 8.9e-05 22.3 2.5 0.0001 22.1 0.8 1.8 2 0 0 2 2 2 1 Chordopoxvirus A13L protein IncA PF04156.9 gi|154151986|ref|YP_001405604.1| - 0.00039 20.0 0.4 0.0011 18.6 0.3 1.7 1 1 0 1 1 1 1 IncA protein Phasin PF05597.6 gi|154151986|ref|YP_001405604.1| - 0.004 16.9 0.0 0.013 15.3 0.0 1.7 1 1 1 2 2 2 1 Poly(hydroxyalcanoate) granule associated protein (phasin) DUF4446 PF14584.1 gi|154151986|ref|YP_001405604.1| - 0.0073 16.1 0.8 0.16 11.8 0.1 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF4446) DUF948 PF06103.6 gi|154151986|ref|YP_001405604.1| - 0.0082 15.9 1.8 2.6 7.9 0.3 2.2 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF948) DUF3139 PF11337.3 gi|154151986|ref|YP_001405604.1| - 0.035 14.3 3.0 0.22 11.8 1.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) MutS_III PF05192.13 gi|154151986|ref|YP_001405604.1| - 0.091 12.5 0.0 1 9.1 0.0 2.0 1 1 1 2 2 2 0 MutS domain III Vps51 PF08700.6 gi|154151986|ref|YP_001405604.1| - 0.11 12.3 1.3 3.1 7.6 0.2 2.4 2 0 0 2 2 2 0 Vps51/Vps67 DUF4381 PF14316.1 gi|154151986|ref|YP_001405604.1| - 0.12 12.4 0.3 0.19 11.8 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4381) Seryl_tRNA_N PF02403.17 gi|154151986|ref|YP_001405604.1| - 0.13 12.2 0.2 1 9.4 0.0 2.1 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Apq12 PF12716.2 gi|154151986|ref|YP_001405604.1| - 0.14 11.8 5.7 0.22 11.2 3.9 1.3 1 0 0 1 1 1 0 Nuclear pore assembly and biogenesis PspB PF06667.7 gi|154151986|ref|YP_001405604.1| - 0.16 11.9 0.5 0.39 10.6 0.3 1.6 1 0 0 1 1 1 0 Phage shock protein B ASFV_J13L PF05568.6 gi|154151986|ref|YP_001405604.1| - 6.5 6.2 5.9 16 4.9 0.1 2.1 2 0 0 2 2 2 0 African swine fever virus J13L protein GTP_EFTU_D2 PF03144.20 gi|154151987|ref|YP_001405605.1| - 1.5e-09 37.7 0.4 3.8e-09 36.5 0.3 1.7 1 0 0 1 1 1 1 Elongation factor Tu domain 2 GTP_EFTU_D4 PF14578.1 gi|154151987|ref|YP_001405605.1| - 3e-06 26.7 0.0 6.3e-06 25.7 0.0 1.5 1 0 0 1 1 1 1 Elongation factor Tu domain 4 PMT_2 PF13231.1 gi|154151988|ref|YP_001405606.1| - 0.00038 20.3 21.7 0.00038 20.3 15.0 3.3 2 1 1 3 3 3 1 Dolichyl-phosphate-mannose-protein mannosyltransferase GtrA PF04138.9 gi|154151989|ref|YP_001405607.1| - 2e-26 92.2 10.0 3.3e-26 91.5 6.9 1.4 1 0 0 1 1 1 1 GtrA-like protein Glycos_transf_2 PF00535.21 gi|154151989|ref|YP_001405607.1| - 1.5e-25 89.8 0.0 2.2e-25 89.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.1 gi|154151989|ref|YP_001405607.1| - 4e-11 43.1 0.0 6.2e-11 42.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.4 gi|154151989|ref|YP_001405607.1| - 0.017 14.2 0.0 0.023 13.7 0.0 1.1 1 0 0 1 1 1 0 Glycosyltransferase like family 2 PMT_2 PF13231.1 gi|154151990|ref|YP_001405608.1| - 2e-24 86.2 22.5 2e-24 86.2 15.6 2.9 2 1 0 2 2 2 1 Dolichyl-phosphate-mannose-protein mannosyltransferase PMT PF02366.13 gi|154151990|ref|YP_001405608.1| - 7.2e-10 38.6 19.9 7.2e-10 38.6 13.8 2.3 2 1 0 2 2 2 1 Dolichyl-phosphate-mannose-protein mannosyltransferase EpsG PF14897.1 gi|154151990|ref|YP_001405608.1| - 1.2e-05 24.4 39.5 1.7e-05 23.9 27.4 1.1 1 0 0 1 1 1 1 EpsG family Nuc_deoxyrib_tr PF05014.10 gi|154151991|ref|YP_001405609.1| - 8.2e-32 109.4 0.0 1.3e-31 108.7 0.0 1.4 1 0 0 1 1 1 1 Nucleoside 2-deoxyribosyltransferase DUF523 PF04463.7 gi|154151991|ref|YP_001405609.1| - 9.9e-10 38.3 0.0 2.2e-09 37.2 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF523) DUF4406 PF14359.1 gi|154151991|ref|YP_001405609.1| - 6.5e-05 22.9 0.0 0.0001 22.2 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4406) TIR_2 PF13676.1 gi|154151991|ref|YP_001405609.1| - 0.0017 18.5 0.1 0.0051 16.9 0.0 1.8 1 1 0 1 1 1 1 TIR domain DUF367 PF04034.8 gi|154151992|ref|YP_001405610.1| - 3.3e-41 139.8 0.0 4.1e-41 139.5 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF367) RLI PF04068.10 gi|154151992|ref|YP_001405610.1| - 5.1e-07 29.1 0.2 8.8e-07 28.4 0.1 1.3 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI Gp_dh_C PF02800.15 gi|154151993|ref|YP_001405611.1| - 4.8e-23 81.3 0.1 7.7e-23 80.6 0.1 1.3 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Gp_dh_N PF00044.19 gi|154151993|ref|YP_001405611.1| - 1.4e-17 64.0 0.8 3.4e-17 62.8 0.1 2.0 2 2 0 2 2 2 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DapB_N PF01113.15 gi|154151993|ref|YP_001405611.1| - 1.2e-10 41.3 0.4 7.5e-10 38.7 0.1 2.4 3 0 0 3 3 3 1 Dihydrodipicolinate reductase, N-terminus TrkA_N PF02254.13 gi|154151993|ref|YP_001405611.1| - 5.4e-06 26.4 0.7 4e-05 23.5 0.0 2.4 2 0 0 2 2 2 1 TrkA-N domain 2-Hacid_dh_C PF02826.14 gi|154151993|ref|YP_001405611.1| - 8.2e-05 21.8 1.3 0.002 17.3 0.3 2.6 2 1 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Saccharop_dh PF03435.13 gi|154151993|ref|YP_001405611.1| - 0.00021 20.3 0.2 0.00031 19.8 0.2 1.2 1 0 0 1 1 1 1 Saccharopine dehydrogenase GFO_IDH_MocA PF01408.17 gi|154151993|ref|YP_001405611.1| - 0.00061 20.3 0.1 0.0069 16.8 0.0 2.4 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_3 PF03447.11 gi|154151993|ref|YP_001405611.1| - 0.00066 20.0 0.4 0.012 16.0 0.0 2.5 2 0 0 2 2 2 1 Homoserine dehydrogenase, NAD binding domain NAD_binding_2 PF03446.10 gi|154151993|ref|YP_001405611.1| - 0.0074 16.1 0.2 0.039 13.8 0.2 2.1 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.12 gi|154151993|ref|YP_001405611.1| - 0.0089 16.4 0.6 0.052 13.9 0.4 2.2 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Semialdhyde_dh PF01118.19 gi|154151993|ref|YP_001405611.1| - 0.0093 16.2 0.4 0.089 13.0 0.0 2.3 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain tRNA-synt_1b PF00579.20 gi|154151994|ref|YP_001405612.1| - 2.5e-52 177.8 0.0 3.1e-52 177.5 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) tRNA-synt_1f PF01921.13 gi|154151994|ref|YP_001405612.1| - 9.2e-05 21.2 0.0 0.11 11.1 0.0 2.1 2 0 0 2 2 2 2 tRNA synthetases class I (K) tRNA-synt_1 PF00133.17 gi|154151994|ref|YP_001405612.1| - 0.081 10.9 0.0 0.13 10.2 0.0 1.3 1 0 0 1 1 1 0 tRNA synthetases class I (I, L, M and V) RIO1 PF01163.17 gi|154151995|ref|YP_001405613.1| - 1.8e-60 203.5 0.0 2.7e-60 202.9 0.0 1.2 1 0 0 1 1 1 1 RIO1 family Kdo PF06293.9 gi|154151995|ref|YP_001405613.1| - 0.00012 21.2 0.0 0.14 11.2 0.0 2.2 2 0 0 2 2 2 2 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.18 gi|154151995|ref|YP_001405613.1| - 0.00077 19.2 0.1 0.02 14.6 0.0 2.2 1 1 1 2 2 2 1 Phosphotransferase enzyme family KH_1 PF00013.24 gi|154151996|ref|YP_001405614.1| - 1.8e-18 65.9 5.5 9.1e-11 41.2 0.5 2.4 2 0 0 2 2 2 2 KH domain KH_3 PF13014.1 gi|154151996|ref|YP_001405614.1| - 1.1e-12 47.2 1.1 2.6e-07 30.1 0.0 2.4 2 0 0 2 2 2 2 KH domain KH_2 PF07650.12 gi|154151996|ref|YP_001405614.1| - 9.9e-07 28.2 6.2 5.8e-05 22.5 0.5 2.6 3 0 0 3 3 3 2 KH domain KH_4 PF13083.1 gi|154151996|ref|YP_001405614.1| - 0.17 11.5 8.3 0.41 10.3 0.2 3.3 2 2 1 3 3 3 0 KH domain DEAD PF00270.24 gi|154151997|ref|YP_001405615.1| - 6.7e-27 94.0 0.0 1.3e-26 93.0 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.26 gi|154151997|ref|YP_001405615.1| - 3.9e-10 39.4 0.0 8.9e-10 38.2 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.10 gi|154151997|ref|YP_001405615.1| - 9.7e-06 25.5 0.0 2.5e-05 24.1 0.0 1.7 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit HHH_5 PF14520.1 gi|154151997|ref|YP_001405615.1| - 2.8e-05 24.1 0.0 0.00014 21.9 0.0 2.2 1 1 1 2 2 2 1 Helix-hairpin-helix domain DNA_pol_lambd_f PF10391.4 gi|154151997|ref|YP_001405615.1| - 0.015 14.8 0.0 0.036 13.5 0.0 1.6 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda CGI-121 PF08617.5 gi|154151998|ref|YP_001405616.1| - 2e-08 34.0 0.0 2.5e-08 33.7 0.0 1.1 1 0 0 1 1 1 1 Kinase binding protein CGI-121 MoCF_biosynth PF00994.19 gi|154151999|ref|YP_001405617.1| - 1.9e-32 111.6 0.2 2.4e-32 111.3 0.1 1.1 1 0 0 1 1 1 1 Probable molybdopterin binding domain