#                                                                           --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
# target name        accession  query name                       accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target
#------------------- ----------             -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------
Cdc6_C	PF09079.11	gi|288559259|ref|YP_003422745.1|	-	1.1e-18	66.9	0.2	5.6e-18	64.7	0.0	2.1	2	0	0	2	2	2	1	CDC6,	C	terminal	winged	helix	domain
AAA_22	PF13401.6	gi|288559259|ref|YP_003422745.1|	-	4.7e-11	43.1	0.0	8.9e-11	42.2	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.6	gi|288559259|ref|YP_003422745.1|	-	8.7e-07	29.5	0.0	2.9e-06	27.8	0.0	1.9	1	1	1	2	2	2	1	AAA	ATPase	domain
AAA	PF00004.29	gi|288559259|ref|YP_003422745.1|	-	5.4e-05	23.6	0.0	0.00011	22.6	0.0	1.5	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
TniB	PF05621.11	gi|288559259|ref|YP_003422745.1|	-	0.00013	21.4	0.0	0.00029	20.3	0.0	1.5	1	0	0	1	1	1	1	Bacterial	TniB	protein
ResIII	PF04851.15	gi|288559259|ref|YP_003422745.1|	-	0.0047	16.9	0.4	0.013	15.5	0.4	1.9	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
Sigma54_activat	PF00158.26	gi|288559259|ref|YP_003422745.1|	-	0.006	16.3	0.0	0.011	15.4	0.0	1.4	1	0	0	1	1	1	1	Sigma-54	interaction	domain
E2F_TDP	PF02319.20	gi|288559259|ref|YP_003422745.1|	-	0.0095	16.0	0.3	0.055	13.5	0.3	2.2	1	1	0	1	1	1	1	E2F/DP	family	winged-helix	DNA-binding	domain
DEAD	PF00270.29	gi|288559259|ref|YP_003422745.1|	-	0.012	15.4	1.0	0.84	9.4	0.0	2.6	3	0	0	3	3	3	0	DEAD/DEAH	box	helicase
NB-ARC	PF00931.22	gi|288559259|ref|YP_003422745.1|	-	0.016	14.4	0.1	0.047	12.9	0.0	1.8	2	0	0	2	2	2	0	NB-ARC	domain
AAA_24	PF13479.6	gi|288559259|ref|YP_003422745.1|	-	0.02	14.6	0.3	0.076	12.7	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
DUF815	PF05673.13	gi|288559259|ref|YP_003422745.1|	-	0.039	13.1	0.0	0.067	12.3	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
IstB_IS21	PF01695.17	gi|288559259|ref|YP_003422745.1|	-	0.069	12.9	0.0	0.55	9.9	0.0	2.2	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA_5	PF07728.14	gi|288559259|ref|YP_003422745.1|	-	0.077	13.0	0.0	0.17	11.9	0.0	1.7	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
NACHT	PF05729.12	gi|288559259|ref|YP_003422745.1|	-	0.081	12.8	0.0	0.16	11.9	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
AAA_assoc_2	PF16193.5	gi|288559259|ref|YP_003422745.1|	-	0.084	13.2	0.1	0.22	11.9	0.1	1.7	1	0	0	1	1	1	0	AAA	C-terminal	domain
AAA_18	PF13238.6	gi|288559259|ref|YP_003422745.1|	-	0.13	12.8	0.1	0.5	10.9	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
ABC_tran	PF00005.27	gi|288559260|ref|YP_003422746.1|	-	1.6e-33	116.1	0.0	2.3e-33	115.6	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
SMC_N	PF02463.19	gi|288559260|ref|YP_003422746.1|	-	1.9e-06	27.5	0.5	0.0011	18.5	0.0	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
RsgA_GTPase	PF03193.16	gi|288559260|ref|YP_003422746.1|	-	5.1e-06	26.5	0.1	9.9e-06	25.6	0.1	1.4	1	0	0	1	1	1	1	RsgA	GTPase
AAA_21	PF13304.6	gi|288559260|ref|YP_003422746.1|	-	1.6e-05	24.9	1.1	0.0052	16.6	0.8	2.2	1	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_29	PF13555.6	gi|288559260|ref|YP_003422746.1|	-	0.00012	21.7	0.0	0.00025	20.7	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_25	PF13481.6	gi|288559260|ref|YP_003422746.1|	-	0.0019	17.8	0.1	0.13	11.8	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.6	gi|288559260|ref|YP_003422746.1|	-	0.002	18.6	0.1	0.0034	17.8	0.1	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_23	PF13476.6	gi|288559260|ref|YP_003422746.1|	-	0.0029	18.1	0.1	0.0048	17.4	0.1	1.3	1	0	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.17	gi|288559260|ref|YP_003422746.1|	-	0.0043	16.8	0.0	0.051	13.3	0.0	2.1	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
MMR_HSR1	PF01926.23	gi|288559260|ref|YP_003422746.1|	-	0.0068	16.5	0.9	0.018	15.1	0.9	2.1	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
AAA_22	PF13401.6	gi|288559260|ref|YP_003422746.1|	-	0.0082	16.4	0.0	0.025	14.8	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
cobW	PF02492.19	gi|288559260|ref|YP_003422746.1|	-	0.016	14.8	0.3	0.15	11.7	0.0	2.2	2	1	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_18	PF13238.6	gi|288559260|ref|YP_003422746.1|	-	0.016	15.7	0.0	0.031	14.8	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_28	PF13521.6	gi|288559260|ref|YP_003422746.1|	-	0.017	15.4	0.0	0.058	13.6	0.0	1.9	3	0	0	3	3	3	0	AAA	domain
AAA_30	PF13604.6	gi|288559260|ref|YP_003422746.1|	-	0.027	14.2	0.1	0.099	12.3	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
RNA12	PF10443.9	gi|288559260|ref|YP_003422746.1|	-	0.036	12.8	0.0	0.054	12.2	0.0	1.2	1	0	0	1	1	1	0	RNA12	protein
Dynamin_N	PF00350.23	gi|288559260|ref|YP_003422746.1|	-	0.047	13.7	1.0	0.11	12.5	1.0	1.6	1	0	0	1	1	1	0	Dynamin	family
Rad17	PF03215.15	gi|288559260|ref|YP_003422746.1|	-	0.074	13.0	0.0	0.15	11.9	0.0	1.5	1	0	0	1	1	1	0	Rad17	P-loop	domain
AAA_11	PF13086.6	gi|288559260|ref|YP_003422746.1|	-	0.074	12.8	0.0	0.24	11.1	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
PhoH	PF02562.16	gi|288559260|ref|YP_003422746.1|	-	0.085	12.3	0.0	0.65	9.4	0.0	2.0	2	0	0	2	2	2	0	PhoH-like	protein
AAA_27	PF13514.6	gi|288559260|ref|YP_003422746.1|	-	0.094	12.3	0.0	0.16	11.5	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_13	PF13166.6	gi|288559260|ref|YP_003422746.1|	-	0.1	11.2	0.0	8.1	4.9	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
FtsX	PF02687.21	gi|288559261|ref|YP_003422747.1|	-	1.7e-16	60.5	36.4	2.9e-09	37.2	6.2	5.2	6	0	0	6	6	6	2	FtsX-like	permease	family
Yip1	PF04893.17	gi|288559261|ref|YP_003422747.1|	-	2.2	8.0	32.0	0.2	11.4	11.2	3.4	3	1	0	3	3	3	0	Yip1	domain
Big_3_5	PF16640.5	gi|288559262|ref|YP_003422748.1|	-	4.8e-14	52.3	11.0	3.5e-10	39.9	9.1	3.3	2	0	0	2	2	2	2	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|288559262|ref|YP_003422748.1|	-	1e-07	31.9	5.2	2e-06	27.7	3.2	2.9	2	0	0	2	2	2	1	Bacterial	Ig-like	domain	(group	1)
MG4	PF17789.1	gi|288559262|ref|YP_003422748.1|	-	1.5e-05	25.1	4.8	0.087	13.0	0.0	3.7	3	1	1	4	4	4	2	Macroglobulin	domain	MG4
Invasin_D3	PF09134.10	gi|288559262|ref|YP_003422748.1|	-	0.0012	19.1	12.8	0.027	14.8	9.1	3.0	1	1	1	2	2	2	1	Invasin,	domain	3
CarboxypepD_reg	PF13620.6	gi|288559262|ref|YP_003422748.1|	-	0.0046	17.2	5.4	0.095	13.0	2.1	2.8	2	0	0	2	2	2	1	Carboxypeptidase	regulatory-like	domain
INCENP_ARK-bind	PF03941.15	gi|288559262|ref|YP_003422748.1|	-	0.015	15.3	0.2	3.9	7.5	0.3	3.8	3	1	1	4	4	4	0	Inner	centromere	protein,	ARK	binding	region
AI-2E_transport	PF01594.16	gi|288559262|ref|YP_003422748.1|	-	0.23	10.6	0.2	0.65	9.1	0.0	1.7	2	0	0	2	2	2	0	AI-2E	family	transporter
Fapy_DNA_glyco	PF01149.24	gi|288559262|ref|YP_003422748.1|	-	0.39	11.3	2.6	26	5.5	0.0	2.4	2	1	0	2	2	2	0	Formamidopyrimidine-DNA	glycosylase	N-terminal	domain
DUF4209	PF13910.6	gi|288559262|ref|YP_003422748.1|	-	0.67	10.2	4.9	1.8e+02	2.4	0.1	4.5	1	1	3	4	4	4	0	Domain	of	unknown	function	(DUF4209)
DUF3948	PF13134.6	gi|288559262|ref|YP_003422748.1|	-	1.1	9.1	14.6	1.6e+02	2.1	0.0	8.7	5	3	6	12	12	12	0	Protein	of	unknown	function	(DUF3948)
LolB	PF03550.14	gi|288559262|ref|YP_003422748.1|	-	5.2	7.1	16.0	28	4.7	0.1	6.4	5	3	1	7	7	7	0	Outer	membrane	lipoprotein	LolB
OTCace_N	PF02729.21	gi|288559263|ref|YP_003422749.1|	-	3.3e-49	166.7	0.0	7.6e-49	165.5	0.0	1.6	2	0	0	2	2	2	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
OTCace	PF00185.24	gi|288559263|ref|YP_003422749.1|	-	1.8e-29	102.8	0.0	3.2e-29	102.0	0.0	1.4	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
Flavodoxin_5	PF12724.7	gi|288559264|ref|YP_003422750.1|	-	2.2e-23	83.1	0.1	2.7e-23	82.8	0.1	1.1	1	0	0	1	1	1	1	Flavodoxin	domain
Flavodoxin_3	PF12641.7	gi|288559264|ref|YP_003422750.1|	-	4.6e-09	36.2	0.7	6.3e-09	35.7	0.7	1.4	1	1	0	1	1	1	1	Flavodoxin	domain
Flavodoxin_1	PF00258.25	gi|288559264|ref|YP_003422750.1|	-	8.6e-06	26.0	0.0	1.1e-05	25.7	0.0	1.5	1	1	0	1	1	1	1	Flavodoxin
Flavodoxin_NdrI	PF07972.11	gi|288559264|ref|YP_003422750.1|	-	0.016	15.3	0.0	0.037	14.2	0.0	1.6	1	1	1	2	2	2	0	NrdI	Flavodoxin	like
DUF4910	PF16254.5	gi|288559264|ref|YP_003422750.1|	-	0.13	11.1	0.0	0.16	10.8	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4910)
FAA_hydrolase	PF01557.18	gi|288559265|ref|YP_003422751.1|	-	1.3e-63	214.6	0.0	1.5e-63	214.4	0.0	1.1	1	0	0	1	1	1	1	Fumarylacetoacetate	(FAA)	hydrolase	family
SNF	PF00209.18	gi|288559266|ref|YP_003422752.1|	-	9.9e-81	272.0	54.5	3.6e-50	171.1	26.2	2.1	1	1	1	2	2	2	2	Sodium:neurotransmitter	symporter	family
Flavodoxin_5	PF12724.7	gi|288559267|ref|YP_003422753.1|	-	2.8e-08	34.1	0.0	4.1e-08	33.6	0.0	1.3	1	0	0	1	1	1	1	Flavodoxin	domain
Fer4_9	PF13187.6	gi|288559267|ref|YP_003422753.1|	-	1.9e-07	31.1	11.8	3.5e-07	30.3	11.8	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|288559267|ref|YP_003422753.1|	-	3e-07	30.4	10.9	7.7e-07	29.1	10.9	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|288559267|ref|YP_003422753.1|	-	3.9e-06	26.7	10.6	0.0047	16.9	2.5	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|288559267|ref|YP_003422753.1|	-	5.3e-06	27.3	9.7	0.0012	19.7	4.3	2.8	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.7	gi|288559267|ref|YP_003422753.1|	-	5.7e-06	26.1	11.5	0.00013	21.8	2.5	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4	PF00037.27	gi|288559267|ref|YP_003422753.1|	-	9.9e-06	25.2	2.9	9.9e-06	25.2	2.9	2.6	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|288559267|ref|YP_003422753.1|	-	1.2e-05	25.8	11.5	7.3e-05	23.3	12.1	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|288559267|ref|YP_003422753.1|	-	7.3e-05	22.8	21.9	0.0013	18.8	11.0	2.1	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Flavodoxin_3	PF12641.7	gi|288559267|ref|YP_003422753.1|	-	0.0017	18.1	0.2	0.01	15.6	0.1	2.3	1	1	2	3	3	3	1	Flavodoxin	domain
Fer4_15	PF13459.6	gi|288559267|ref|YP_003422753.1|	-	0.0021	18.7	6.2	0.25	12.1	0.4	2.6	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_17	PF13534.6	gi|288559267|ref|YP_003422753.1|	-	0.0052	17.3	12.3	0.048	14.2	2.7	2.6	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|288559267|ref|YP_003422753.1|	-	0.0074	16.7	14.8	0.029	14.8	3.8	2.5	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Flavodoxin_1	PF00258.25	gi|288559267|ref|YP_003422753.1|	-	0.0081	16.4	0.0	0.015	15.5	0.0	1.7	1	1	0	1	1	1	1	Flavodoxin
Fer4_4	PF12800.7	gi|288559267|ref|YP_003422753.1|	-	0.027	15.0	3.6	0.027	15.0	3.6	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|288559267|ref|YP_003422753.1|	-	0.082	13.1	3.0	0.24	11.6	3.0	1.8	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|288559267|ref|YP_003422753.1|	-	0.14	12.7	11.3	0.1	13.2	3.1	2.9	3	0	0	3	3	3	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_3	PF12798.7	gi|288559267|ref|YP_003422753.1|	-	1.3	10.1	20.6	0.95	10.6	4.4	2.7	3	0	0	3	3	2	0	4Fe-4S	binding	domain
HisG	PF01634.18	gi|288559268|ref|YP_003422754.1|	-	1.5e-51	174.6	0.6	2.4e-51	173.9	0.6	1.3	1	0	0	1	1	1	1	ATP	phosphoribosyltransferase
HisG_C	PF08029.11	gi|288559268|ref|YP_003422754.1|	-	4.1e-25	87.7	0.8	7.5e-25	86.9	0.8	1.5	1	0	0	1	1	1	1	HisG,	C-terminal	domain
DUF881	PF05949.12	gi|288559268|ref|YP_003422754.1|	-	0.0015	18.4	1.6	0.009	15.9	0.1	2.4	1	1	1	2	2	2	1	Bacterial	protein	of	unknown	function	(DUF881)
ERK-JNK_inhib	PF15002.6	gi|288559268|ref|YP_003422754.1|	-	0.02	14.6	1.3	0.029	14.1	0.4	1.7	2	0	0	2	2	2	0	ERK	and	JNK	pathways,	inhibitor
BRCT	PF00533.26	gi|288559268|ref|YP_003422754.1|	-	0.056	13.8	0.1	0.23	11.9	0.0	2.0	2	0	0	2	2	2	0	BRCA1	C	Terminus	(BRCT)	domain
Response_reg	PF00072.24	gi|288559268|ref|YP_003422754.1|	-	0.059	13.5	0.2	0.22	11.7	0.1	2.1	2	0	0	2	2	2	0	Response	regulator	receiver	domain
CBFD_NFYB_HMF	PF00808.23	gi|288559269|ref|YP_003422755.1|	-	5.5e-16	58.6	3.9	6e-16	58.5	3.9	1.0	1	0	0	1	1	1	1	Histone-like	transcription	factor	(CBF/NF-Y)	and	archaeal	histone
TAF	PF02969.17	gi|288559269|ref|YP_003422755.1|	-	1e-05	25.6	0.6	1.1e-05	25.5	0.6	1.1	1	0	0	1	1	1	1	TATA	box	binding	protein	associated	factor	(TAF)
Histone	PF00125.24	gi|288559269|ref|YP_003422755.1|	-	1.8e-05	25.1	0.4	2e-05	24.9	0.4	1.1	1	0	0	1	1	1	1	Core	histone	H2A/H2B/H3/H4
CENP-S	PF15630.6	gi|288559269|ref|YP_003422755.1|	-	0.00018	21.8	0.1	0.00021	21.6	0.1	1.1	1	0	0	1	1	1	1	CENP-S	protein
TFIID-31kDa	PF02291.15	gi|288559269|ref|YP_003422755.1|	-	0.0057	16.7	0.1	0.006	16.6	0.1	1.0	1	0	0	1	1	1	1	Transcription	initiation	factor	IID,	31kD	subunit
CENP-T_C	PF15511.6	gi|288559269|ref|YP_003422755.1|	-	0.012	15.7	0.1	0.013	15.6	0.1	1.1	1	0	0	1	1	1	0	Centromere	kinetochore	component	CENP-T	histone	fold
AP2	PF00847.20	gi|288559270|ref|YP_003422756.1|	-	4.5e-08	33.2	7.9	0.00074	19.7	0.1	3.9	3	1	0	3	3	3	3	AP2	domain
DUF2914	PF11141.8	gi|288559270|ref|YP_003422756.1|	-	0.00048	19.8	0.4	0.017	14.8	0.1	2.8	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF2914)
DUF1816	PF08846.10	gi|288559270|ref|YP_003422756.1|	-	0.005	16.8	0.2	3.5	7.7	0.0	2.7	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF1816)
SPOR	PF05036.13	gi|288559270|ref|YP_003422756.1|	-	0.035	14.5	0.1	9.1	6.7	0.1	3.1	2	1	0	2	2	2	0	Sporulation	related	domain
AAA_14	PF13173.6	gi|288559272|ref|YP_003422758.1|	-	1e-24	87.1	0.1	1e-24	87.1	0.1	2.4	3	0	0	3	3	3	1	AAA	domain
DUF4143	PF13635.6	gi|288559272|ref|YP_003422758.1|	-	1.7e-10	41.1	0.1	3.2e-10	40.2	0.1	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
HTH_24	PF13412.6	gi|288559272|ref|YP_003422758.1|	-	0.00021	20.8	0.0	0.00064	19.2	0.0	1.9	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.7	gi|288559272|ref|YP_003422758.1|	-	0.0011	18.8	0.0	0.0028	17.5	0.0	1.6	2	0	0	2	2	1	1	MarR	family
AAA_16	PF13191.6	gi|288559272|ref|YP_003422758.1|	-	0.0012	19.3	0.0	0.0063	16.9	0.0	2.1	2	1	1	3	3	3	1	AAA	ATPase	domain
MarR	PF01047.22	gi|288559272|ref|YP_003422758.1|	-	0.0014	18.5	0.0	0.0032	17.4	0.0	1.6	1	0	0	1	1	1	1	MarR	family
HTH_11	PF08279.12	gi|288559272|ref|YP_003422758.1|	-	0.0024	17.8	0.0	0.0062	16.5	0.0	1.7	1	0	0	1	1	1	1	HTH	domain
AAA	PF00004.29	gi|288559272|ref|YP_003422758.1|	-	0.011	16.1	0.0	0.026	14.9	0.0	1.7	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
HTH_17	PF12728.7	gi|288559272|ref|YP_003422758.1|	-	0.013	15.7	0.0	4.4	7.6	0.0	2.8	2	0	0	2	2	2	0	Helix-turn-helix	domain
AAA_19	PF13245.6	gi|288559272|ref|YP_003422758.1|	-	0.017	15.5	0.0	0.15	12.4	0.0	2.5	1	1	0	1	1	1	0	AAA	domain
Rrf2	PF02082.20	gi|288559272|ref|YP_003422758.1|	-	0.045	14.1	0.0	0.14	12.5	0.0	1.8	2	0	0	2	2	2	0	Transcriptional	regulator
Fe_dep_repress	PF01325.19	gi|288559272|ref|YP_003422758.1|	-	0.05	13.8	0.0	0.13	12.5	0.0	1.8	1	1	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
UvrD-helicase	PF00580.21	gi|288559272|ref|YP_003422758.1|	-	0.064	12.8	0.1	0.22	11.0	0.0	1.9	2	1	0	2	2	2	0	UvrD/REP	helicase	N-terminal	domain
AAA_22	PF13401.6	gi|288559272|ref|YP_003422758.1|	-	0.075	13.3	0.0	0.37	11.1	0.0	2.1	1	1	0	1	1	1	0	AAA	domain
HTH_Crp_2	PF13545.6	gi|288559272|ref|YP_003422758.1|	-	0.075	13.0	0.0	0.19	11.7	0.0	1.7	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
HTH_36	PF13730.6	gi|288559272|ref|YP_003422758.1|	-	0.085	12.8	0.5	0.46	10.5	0.0	2.5	3	0	0	3	3	3	0	Helix-turn-helix	domain
RNA_helicase	PF00910.22	gi|288559272|ref|YP_003422758.1|	-	0.095	13.1	0.1	1	9.8	0.0	2.5	3	0	0	3	3	2	0	RNA	helicase
SRP54	PF00448.22	gi|288559272|ref|YP_003422758.1|	-	0.1	12.2	0.0	0.18	11.4	0.0	1.3	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
ResIII	PF04851.15	gi|288559272|ref|YP_003422758.1|	-	0.15	12.1	0.3	2.4	8.1	0.0	2.6	2	1	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
Peptidase_C1	PF00112.23	gi|288559273|ref|YP_003422759.1|	-	2e-24	86.9	1.6	4.3e-24	85.8	0.5	2.1	2	0	0	2	2	2	1	Papain	family	cysteine	protease
Lectin_like	PF18560.1	gi|288559273|ref|YP_003422759.1|	-	2e-09	37.8	7.0	2e-09	37.8	7.0	3.8	3	1	0	3	3	3	1	Lectin	like	domain
Big_3_5	PF16640.5	gi|288559273|ref|YP_003422759.1|	-	0.00062	19.9	21.1	0.57	10.4	0.1	5.7	4	1	1	5	5	5	4	Bacterial	Ig-like	domain	(group	3)
Peptidase_C1_2	PF03051.15	gi|288559273|ref|YP_003422759.1|	-	0.00073	18.4	0.1	0.053	12.3	0.2	2.4	2	0	0	2	2	2	1	Peptidase	C1-like	family
DUF4198	PF10670.9	gi|288559273|ref|YP_003422759.1|	-	0.0035	17.8	2.4	0.24	11.7	0.2	2.9	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF4198)
Big_1	PF02369.16	gi|288559273|ref|YP_003422759.1|	-	0.011	15.7	7.0	2.5	8.2	0.1	4.8	4	0	0	4	4	4	0	Bacterial	Ig-like	domain	(group	1)
Invasin_D3	PF09134.10	gi|288559273|ref|YP_003422759.1|	-	0.012	15.9	1.2	0.012	15.9	1.2	4.3	2	1	1	3	3	3	0	Invasin,	domain	3
Filamin	PF00630.19	gi|288559273|ref|YP_003422759.1|	-	0.045	14.6	0.4	0.43	11.4	0.0	2.8	2	0	0	2	2	2	0	Filamin/ABP280	repeat
Pentapeptide_4	PF13599.6	gi|288559273|ref|YP_003422759.1|	-	0.68	10.1	4.0	3.2	8.0	0.8	3.5	3	0	0	3	3	3	0	Pentapeptide	repeats	(9	copies)
Lipocalin_4	PF13648.6	gi|288559274|ref|YP_003422760.1|	-	0.76	10.8	6.2	4.5	8.3	3.8	2.5	1	1	1	2	2	2	0	Lipocalin-like	domain
TIR_2	PF13676.6	gi|288559275|ref|YP_003422761.1|	-	4.3e-19	69.2	0.0	6.2e-19	68.7	0.0	1.2	1	0	0	1	1	1	1	TIR	domain
DUF1863	PF08937.11	gi|288559275|ref|YP_003422761.1|	-	5.6e-07	29.9	0.3	3.9e-06	27.2	0.3	2.0	1	1	0	1	1	1	1	MTH538	TIR-like	domain	(DUF1863)
TIR	PF01582.20	gi|288559275|ref|YP_003422761.1|	-	6.1e-06	26.2	0.6	8.7e-06	25.7	0.6	1.2	1	0	0	1	1	1	1	TIR	domain
TIR-like	PF10137.9	gi|288559275|ref|YP_003422761.1|	-	3e-05	24.0	0.0	7.9e-05	22.6	0.0	1.6	1	1	0	1	1	1	1	Predicted	nucleotide-binding	protein	containing	TIR-like	domain
TIR_2	PF13676.6	gi|288559276|ref|YP_003422762.1|	-	9.2e-15	55.3	0.1	1.7e-14	54.4	0.1	1.5	1	0	0	1	1	1	1	TIR	domain
DUF1863	PF08937.11	gi|288559276|ref|YP_003422762.1|	-	1.3e-06	28.7	3.2	0.005	17.2	0.4	2.6	2	1	0	2	2	2	2	MTH538	TIR-like	domain	(DUF1863)
TIR	PF01582.20	gi|288559276|ref|YP_003422762.1|	-	0.00028	20.8	0.5	0.00051	19.9	0.5	1.4	1	0	0	1	1	1	1	TIR	domain
Colicin_K	PF17500.2	gi|288559276|ref|YP_003422762.1|	-	0.017	15.7	0.5	0.07	13.7	0.1	2.1	2	1	0	2	2	2	0	Colicin-K
DUF11	PF01345.18	gi|288559277|ref|YP_003422763.1|	-	1.5e-06	28.4	0.3	2.7e-06	27.6	0.3	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF11
Lectin_like	PF18560.1	gi|288559278|ref|YP_003422764.1|	-	7.7e-19	68.4	1.1	7.7e-19	68.4	1.1	3.5	5	0	0	5	5	5	1	Lectin	like	domain
Peptidase_C1	PF00112.23	gi|288559278|ref|YP_003422764.1|	-	2.2e-13	50.8	1.1	6e-13	49.4	0.1	2.3	2	1	0	2	2	2	1	Papain	family	cysteine	protease
Big_1	PF02369.16	gi|288559278|ref|YP_003422764.1|	-	7.4e-10	38.7	7.5	2.5e-05	24.2	1.0	2.9	2	0	0	2	2	2	2	Bacterial	Ig-like	domain	(group	1)
CarboxypepD_reg	PF13620.6	gi|288559278|ref|YP_003422764.1|	-	2e-09	37.6	3.0	0.0011	19.2	0.2	2.6	2	0	0	2	2	2	2	Carboxypeptidase	regulatory-like	domain
Big_3_5	PF16640.5	gi|288559278|ref|YP_003422764.1|	-	6e-08	32.8	14.1	0.0024	18.0	3.1	4.1	4	0	0	4	4	4	2	Bacterial	Ig-like	domain	(group	3)
Invasin_D3	PF09134.10	gi|288559278|ref|YP_003422764.1|	-	1.9e-05	24.9	11.9	0.031	14.6	2.4	2.9	2	0	0	2	2	2	2	Invasin,	domain	3
CarbopepD_reg_2	PF13715.6	gi|288559278|ref|YP_003422764.1|	-	6.3e-05	22.9	9.2	0.012	15.5	1.3	3.1	2	0	0	2	2	2	2	CarboxypepD_reg-like	domain
MG4	PF17789.1	gi|288559278|ref|YP_003422764.1|	-	0.012	15.8	3.4	1.4	9.1	0.3	2.8	2	0	0	2	2	2	0	Macroglobulin	domain	MG4
CC190	PF15768.5	gi|288559278|ref|YP_003422764.1|	-	1.1	9.3	5.6	1.9	8.5	5.6	1.3	1	0	0	1	1	1	0	Coiled-coil	domain-containing	protein	190
Big_6	PF17936.1	gi|288559278|ref|YP_003422764.1|	-	2.3	8.6	7.5	15	5.9	0.5	3.5	4	0	0	4	4	4	0	Bacterial	Ig	domain
OmdA	PF13376.6	gi|288559279|ref|YP_003422765.1|	-	1.9e-10	40.6	1.5	2e-10	40.5	0.4	1.7	2	0	0	2	2	2	1	Bacteriocin-protection,	YdeI	or	OmpD-Associated
DUF3206	PF11472.8	gi|288559279|ref|YP_003422765.1|	-	0.011	15.8	0.1	0.015	15.3	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3206)
Nudix_hydro	PF18290.1	gi|288559279|ref|YP_003422765.1|	-	0.019	14.9	1.2	0.029	14.3	0.2	1.8	2	0	0	2	2	2	0	Nudix	hydrolase	domain
ASFV_360	PF01671.16	gi|288559283|ref|YP_003422769.1|	-	0.034	13.6	0.3	2.1	7.8	0.1	2.2	2	0	0	2	2	2	0	African	swine	fever	virus	multigene	family	360	protein
DNA_methylase	PF00145.17	gi|288559284|ref|YP_003422770.1|	-	1.2e-102	343.8	0.2	1.4e-102	343.5	0.2	1.1	1	0	0	1	1	1	1	C-5	cytosine-specific	DNA	methylase
DNA_methylase	PF00145.17	gi|288559285|ref|YP_003422771.1|	-	3.4e-70	237.0	0.1	4.1e-70	236.8	0.1	1.1	1	0	0	1	1	1	1	C-5	cytosine-specific	DNA	methylase
Methyltransf_15	PF09445.10	gi|288559285|ref|YP_003422771.1|	-	4.1e-05	23.2	0.1	6.8e-05	22.5	0.1	1.4	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_25	PF13649.6	gi|288559285|ref|YP_003422771.1|	-	0.0013	19.4	0.0	0.005	17.5	0.0	2.0	2	0	0	2	2	2	1	Methyltransferase	domain
MTS	PF05175.14	gi|288559285|ref|YP_003422771.1|	-	0.012	15.1	0.0	0.02	14.5	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	small	domain
Methyltransf_31	PF13847.6	gi|288559285|ref|YP_003422771.1|	-	0.046	13.5	0.2	0.11	12.3	0.1	1.7	2	0	0	2	2	2	0	Methyltransferase	domain
TehB	PF03848.14	gi|288559285|ref|YP_003422771.1|	-	0.091	12.2	0.3	21	4.4	0.0	3.0	3	0	0	3	3	3	0	Tellurite	resistance	protein	TehB
PrmA	PF06325.13	gi|288559285|ref|YP_003422771.1|	-	0.12	11.7	0.0	0.18	11.2	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
ParG	PF09274.10	gi|288559286|ref|YP_003422772.1|	-	0.0076	16.4	0.0	0.0095	16.0	0.0	1.2	1	0	0	1	1	1	1	ParG
RHH_1	PF01402.21	gi|288559286|ref|YP_003422772.1|	-	0.059	13.3	0.0	0.076	13.0	0.0	1.2	1	0	0	1	1	1	0	Ribbon-helix-helix	protein,	copG	family
McrBC	PF10117.9	gi|288559287|ref|YP_003422773.1|	-	5e-18	65.3	7.9	7.3e-18	64.8	7.9	1.2	1	0	0	1	1	1	1	McrBC	5-methylcytosine	restriction	system	component
RNA_pol_Rpb1_3	PF04983.18	gi|288559287|ref|YP_003422773.1|	-	0.00015	21.7	0.9	0.00025	21.0	0.4	1.6	2	0	0	2	2	2	1	RNA	polymerase	Rpb1,	domain	3
EURL	PF06937.11	gi|288559287|ref|YP_003422773.1|	-	0.011	15.1	1.8	1.2	8.5	0.3	2.1	2	0	0	2	2	2	0	EURL	protein
Big_3_5	PF16640.5	gi|288559289|ref|YP_003422775.1|	-	9.6e-44	147.5	57.1	4e-11	42.9	2.7	9.4	11	0	0	11	11	9	6	Bacterial	Ig-like	domain	(group	3)
DUF11	PF01345.18	gi|288559289|ref|YP_003422775.1|	-	4.5e-35	119.8	7.1	1.6e-11	44.3	0.2	8.6	7	1	1	8	8	8	6	Domain	of	unknown	function	DUF11
Rib	PF08428.10	gi|288559289|ref|YP_003422775.1|	-	0.00015	21.7	28.7	0.34	10.9	0.0	9.1	9	0	0	9	9	8	4	Rib/alpha-like	repeat
Big_10	PF17964.1	gi|288559289|ref|YP_003422775.1|	-	0.00022	21.2	1.8	0.13	12.3	0.0	4.6	5	0	0	5	5	5	1	Bacterial	Ig	domain
NPCBM_assoc	PF10633.9	gi|288559289|ref|YP_003422775.1|	-	0.00046	20.4	1.7	30	5.0	0.0	7.3	7	2	0	7	7	6	0	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
CARDB	PF07705.11	gi|288559289|ref|YP_003422775.1|	-	0.00074	19.7	3.2	0.00074	19.7	3.2	8.0	6	2	1	7	7	7	2	CARDB
Bac_rhamnosid_C	PF17390.2	gi|288559289|ref|YP_003422775.1|	-	0.004	16.9	0.2	9.7	6.1	0.0	4.5	4	0	0	4	4	4	1	Bacterial	alpha-L-rhamnosidase	C-terminal	domain
RBD	PF02196.15	gi|288559289|ref|YP_003422775.1|	-	0.0045	17.0	0.0	16	5.6	0.0	4.4	4	0	0	4	4	4	0	Raf-like	Ras-binding	domain
DUF1249	PF06853.12	gi|288559289|ref|YP_003422775.1|	-	0.048	13.7	0.1	5.5	7.1	0.0	3.4	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF1249)
ETF_QO	PF05187.13	gi|288559289|ref|YP_003422775.1|	-	0.069	13.3	5.9	23	5.2	0.0	4.9	5	0	0	5	5	5	0	Electron	transfer	flavoprotein-ubiquinone	oxidoreductase,	4Fe-4S
B1	PF02246.15	gi|288559289|ref|YP_003422775.1|	-	0.16	12.1	6.5	0.36	10.9	0.0	5.0	6	0	0	6	6	6	0	Protein	L	b1	domain
GPI-anchored	PF10342.9	gi|288559289|ref|YP_003422775.1|	-	0.16	12.7	35.5	0.28	12.0	0.0	8.9	9	1	0	10	10	10	0	Ser-Thr-rich	glycosyl-phosphatidyl-inositol-anchored	membrane	family
Integrin_alpha2	PF08441.12	gi|288559289|ref|YP_003422775.1|	-	0.24	10.2	1.5	2.1	7.1	0.0	2.9	3	0	0	3	3	3	0	Integrin	alpha
Arrestin_C	PF02752.22	gi|288559289|ref|YP_003422775.1|	-	1.8	9.0	18.3	5.3	7.5	0.3	6.6	6	2	0	6	6	6	0	Arrestin	(or	S-antigen),	C-terminal	domain
Chlam_PMP	PF02415.17	gi|288559290|ref|YP_003422776.1|	-	4.1e-09	36.4	47.9	0.16	12.5	1.0	9.9	10	1	0	10	10	10	9	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
Chlam_PMP	PF02415.17	gi|288559291|ref|YP_003422777.1|	-	1.7e-16	59.5	36.9	0.52	10.9	0.5	11.1	11	0	0	11	11	11	9	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
DUF4957	PF16318.5	gi|288559291|ref|YP_003422777.1|	-	0.26	11.2	9.1	0.045	13.7	0.9	3.4	1	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4957)
zinc_ribbon_2	PF13240.6	gi|288559293|ref|YP_003422779.1|	-	2.4e-07	30.3	3.6	4.1e-07	29.5	3.6	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|288559293|ref|YP_003422779.1|	-	0.00013	21.2	0.9	0.0002	20.6	0.9	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|288559293|ref|YP_003422779.1|	-	0.00015	21.7	2.0	0.00033	20.6	1.9	1.6	1	1	0	1	1	1	1	Double	zinc	ribbon
Nudix_N_2	PF14803.6	gi|288559293|ref|YP_003422779.1|	-	0.0019	18.1	4.1	0.15	12.0	0.1	2.5	3	0	0	3	3	3	2	Nudix	N-terminal
YhfH	PF14149.6	gi|288559293|ref|YP_003422779.1|	-	0.0032	17.4	5.1	0.59	10.2	0.6	2.6	1	1	1	2	2	2	2	YhfH-like	protein
ADK_lid	PF05191.14	gi|288559293|ref|YP_003422779.1|	-	0.04	13.9	2.4	7.6	6.6	0.1	3.3	3	0	0	3	3	3	0	Adenylate	kinase,	active	site	lid
SF3A3	PF16837.5	gi|288559293|ref|YP_003422779.1|	-	0.069	13.7	0.6	0.097	13.2	0.6	1.2	1	0	0	1	1	1	0	Pre-mRNA-splicing	factor	SF3A3,	of	SF3a	complex,	Prp9
His_Phos_1	PF00300.22	gi|288559293|ref|YP_003422779.1|	-	0.11	12.2	0.0	0.13	12.0	0.0	1.1	1	0	0	1	1	1	0	Histidine	phosphatase	superfamily	(branch	1)
NOB1_Zn_bind	PF08772.11	gi|288559293|ref|YP_003422779.1|	-	0.22	11.7	4.6	0.56	10.4	4.8	1.7	1	1	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
DUF2116	PF09889.9	gi|288559293|ref|YP_003422779.1|	-	0.26	11.3	2.5	0.4	10.7	2.5	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
RNA_POL_M_15KD	PF02150.16	gi|288559293|ref|YP_003422779.1|	-	0.3	11.0	5.2	0.91	9.5	0.5	2.3	1	1	1	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
ASFV_p27	PF06556.11	gi|288559293|ref|YP_003422779.1|	-	0.89	9.7	4.4	1	9.4	1.1	2.1	2	0	0	2	2	2	0	IAP-like	protein	p27	C-terminus
PknG_rubred	PF16919.5	gi|288559293|ref|YP_003422779.1|	-	1.2	9.4	3.2	0.72	10.0	0.1	1.9	1	1	1	2	2	2	0	Protein	kinase	G	rubredoxin	domain
DUF285	PF03382.14	gi|288559294|ref|YP_003422780.1|	-	7.5e-80	264.6	29.3	4e-24	84.7	6.5	3.8	1	1	3	4	4	4	4	Mycoplasma	protein	of	unknown	function,	DUF285
LRR_5	PF13306.6	gi|288559294|ref|YP_003422780.1|	-	2.6e-11	43.6	5.8	4.6e-06	26.6	0.1	3.8	1	1	2	3	3	3	3	BspA	type	Leucine	rich	repeat	region	(6	copies)
DUF4372	PF14294.6	gi|288559294|ref|YP_003422780.1|	-	0.00026	21.1	0.1	2.6	8.3	0.0	5.3	4	1	2	6	6	6	1	Domain	of	unknown	function	(DUF4372)
Spectrin_like	PF18373.1	gi|288559294|ref|YP_003422780.1|	-	0.25	11.4	9.5	59	3.8	0.0	5.7	6	0	0	6	6	6	0	Spectrin	like	domain
HPIH	PF13323.6	gi|288559294|ref|YP_003422780.1|	-	2.5	8.0	6.2	8.7	6.2	0.5	3.7	2	1	1	3	3	3	0	N-terminal	domain	with	HPIH	motif
HEAT	PF02985.22	gi|288559295|ref|YP_003422781.1|	-	7e-20	69.4	8.3	0.37	11.2	0.0	12.1	12	1	0	12	12	12	5	HEAT	repeat
HEAT_2	PF13646.6	gi|288559295|ref|YP_003422781.1|	-	1.5e-14	54.2	11.9	0.018	15.4	0.4	9.9	2	1	4	7	7	7	6	HEAT	repeats
DUF4042	PF13251.6	gi|288559295|ref|YP_003422781.1|	-	0.00074	19.3	2.3	19	4.9	0.0	6.2	3	2	1	7	7	7	0	Domain	of	unknown	function	(DUF4042)
DUF2187	PF09953.9	gi|288559295|ref|YP_003422781.1|	-	0.0036	17.2	2.8	0.84	9.7	0.1	4.8	4	2	2	6	6	6	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2187)
S4	PF01479.25	gi|288559295|ref|YP_003422781.1|	-	0.032	14.0	0.1	0.59	9.9	0.0	2.7	2	0	0	2	2	2	0	S4	domain
CSN4_RPN5_eIF3a	PF18420.1	gi|288559295|ref|YP_003422781.1|	-	0.046	13.9	0.8	24	5.2	0.0	3.8	3	0	0	3	3	3	0	CSN4/RPN5/eIF3a	helix	turn	helix	domain
BTD	PF09270.10	gi|288559295|ref|YP_003422781.1|	-	0.059	13.6	1.6	2.3	8.4	0.0	3.0	2	1	0	2	2	2	0	Beta-trefoil	DNA-binding	domain
Prok_Ub	PF14454.6	gi|288559295|ref|YP_003422781.1|	-	0.17	11.6	0.1	33	4.2	0.0	3.6	4	0	0	4	4	4	0	Prokaryotic	Ubiquitin
AlaDh_PNT_C	PF01262.21	gi|288559295|ref|YP_003422781.1|	-	0.34	10.2	1.1	8.9	5.5	0.0	3.2	4	1	0	4	4	4	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
DUF2773	PF10971.8	gi|288559295|ref|YP_003422781.1|	-	4.1	7.6	8.5	23	5.2	0.2	4.9	4	3	0	5	5	5	0	Protein	of	unknown	function	(DUF2773)
Chlam_PMP	PF02415.17	gi|288559296|ref|YP_003422782.1|	-	0.079	13.5	63.8	0.75	10.4	0.6	13.7	16	0	0	16	16	16	0	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
LMWPc	PF01451.21	gi|288559297|ref|YP_003422783.1|	-	2.3e-20	73.4	0.0	5.5e-20	72.2	0.0	1.7	1	0	0	1	1	1	1	Low	molecular	weight	phosphotyrosine	protein	phosphatase
Biotin_lipoyl	PF00364.22	gi|288559297|ref|YP_003422783.1|	-	3.5e-17	62.0	4.8	8.8e-17	60.7	4.8	1.8	1	0	0	1	1	1	1	Biotin-requiring	enzyme
Biotin_lipoyl_2	PF13533.6	gi|288559297|ref|YP_003422783.1|	-	4.2e-07	29.7	3.2	0.0079	16.0	0.2	2.5	1	1	1	2	2	2	2	Biotin-lipoyl	like
RnfC_N	PF13375.6	gi|288559297|ref|YP_003422783.1|	-	0.0071	16.3	1.9	0.011	15.6	0.3	2.2	2	0	0	2	2	2	1	RnfC	Barrel	sandwich	hybrid	domain
PYNP_C	PF07831.13	gi|288559297|ref|YP_003422783.1|	-	0.031	13.9	0.6	0.47	10.1	0.1	2.7	1	1	1	2	2	2	0	Pyrimidine	nucleoside	phosphorylase	C-terminal	domain
HlyD_3	PF13437.6	gi|288559297|ref|YP_003422783.1|	-	0.071	13.8	0.2	2.9	8.6	0.0	2.5	2	0	0	2	2	2	0	HlyD	family	secretion	protein
ATP11	PF06644.11	gi|288559297|ref|YP_003422783.1|	-	0.67	9.7	14.9	2.3	8.0	0.6	2.2	2	0	0	2	2	2	0	ATP11	protein
ASD2	PF08687.11	gi|288559297|ref|YP_003422783.1|	-	1.3	8.5	11.4	2	7.9	7.7	2.0	2	0	0	2	2	2	0	Apx/Shroom	domain	ASD2
Neur_chan_memb	PF02932.16	gi|288559297|ref|YP_003422783.1|	-	1.6	8.8	4.6	1.8	8.5	1.7	1.9	2	0	0	2	2	2	0	Neurotransmitter-gated	ion-channel	transmembrane	region
Eapp_C	PF10238.9	gi|288559297|ref|YP_003422783.1|	-	4.1	7.5	13.6	14	5.7	9.6	2.3	2	0	0	2	2	2	0	E2F-associated	phosphoprotein
CPSF100_C	PF13299.6	gi|288559297|ref|YP_003422783.1|	-	4.3	7.5	11.9	20	5.3	0.2	2.3	2	0	0	2	2	2	0	Cleavage	and	polyadenylation	factor	2	C-terminal
AAA_14	PF13173.6	gi|288559298|ref|YP_003422784.1|	-	3.5e-36	124.1	0.9	8.9e-36	122.8	0.9	1.7	1	0	0	1	1	1	1	AAA	domain
DUF4143	PF13635.6	gi|288559298|ref|YP_003422784.1|	-	3.7e-10	40.0	1.3	7.2e-10	39.1	1.3	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
ATPase_2	PF01637.18	gi|288559298|ref|YP_003422784.1|	-	3.9e-05	23.7	3.2	0.0043	17.0	0.2	3.0	1	1	1	2	2	2	2	ATPase	domain	predominantly	from	Archaea
NACHT	PF05729.12	gi|288559298|ref|YP_003422784.1|	-	0.0036	17.2	0.0	0.0067	16.4	0.0	1.4	1	0	0	1	1	1	1	NACHT	domain
PDDEXK_5	PF11645.8	gi|288559298|ref|YP_003422784.1|	-	0.017	15.1	0.0	0.034	14.1	0.0	1.5	1	0	0	1	1	1	0	PD-(D/E)XK	endonuclease
AAA	PF00004.29	gi|288559298|ref|YP_003422784.1|	-	0.029	14.8	0.0	0.058	13.8	0.0	1.5	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
MobB	PF03205.14	gi|288559298|ref|YP_003422784.1|	-	0.088	12.7	0.0	0.31	10.9	0.0	1.8	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
SAP	PF02037.27	gi|288559299|ref|YP_003422785.1|	-	4e-09	36.0	0.0	1.6e-08	34.1	0.0	2.1	1	0	0	1	1	1	1	SAP	domain
DUF4315	PF14193.6	gi|288559299|ref|YP_003422785.1|	-	0.0032	17.4	6.0	4.8	7.3	0.0	4.6	5	0	0	5	5	5	2	Domain	of	unknown	function	(DUF4315)
HeH	PF12949.7	gi|288559299|ref|YP_003422785.1|	-	0.089	12.5	0.1	0.27	11.0	0.1	1.8	1	0	0	1	1	1	0	HeH/LEM	domain
HTH_26	PF13443.6	gi|288559299|ref|YP_003422785.1|	-	0.099	13.1	3.6	9.8	6.7	0.2	3.9	3	0	0	3	3	3	0	Cro/C1-type	HTH	DNA-binding	domain
DUF945	PF06097.11	gi|288559299|ref|YP_003422785.1|	-	0.16	11.0	8.5	0.19	10.8	0.1	3.9	3	1	1	4	4	4	0	Bacterial	protein	of	unknown	function	(DUF945)
vWA-TerF-like	PF10138.9	gi|288559300|ref|YP_003422786.1|	-	0.0087	16.2	0.4	0.011	15.9	0.4	1.1	1	0	0	1	1	1	1	vWA	found	in	TerF	C	terminus
Pox_D5	PF03288.16	gi|288559300|ref|YP_003422786.1|	-	0.038	14.5	1.2	0.055	14.0	0.7	1.6	1	1	0	1	1	1	0	Poxvirus	D5	protein-like
AbiJ_NTD3	PF18860.1	gi|288559300|ref|YP_003422786.1|	-	0.067	12.7	0.1	0.072	12.6	0.1	1.1	1	0	0	1	1	1	0	AbiJ	N-terminal	domain	3
bZIP_1	PF00170.21	gi|288559301|ref|YP_003422787.1|	-	0.11	12.6	13.6	0.58	10.3	1.3	2.9	2	1	1	3	3	3	0	bZIP	transcription	factor
Med9	PF07544.13	gi|288559301|ref|YP_003422787.1|	-	0.34	11.0	0.1	0.34	11.0	0.1	2.9	3	0	0	3	3	3	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
ZapB	PF06005.12	gi|288559301|ref|YP_003422787.1|	-	3.3	8.2	14.6	11	6.5	0.8	2.8	2	1	0	2	2	2	0	Cell	division	protein	ZapB
5TM-5TMR_LYT	PF07694.12	gi|288559302|ref|YP_003422788.1|	-	8.3e-33	113.3	15.5	1.3e-32	112.7	15.5	1.3	1	0	0	1	1	1	1	5TMR	of	5TMR-LYT
XhlA	PF10779.9	gi|288559302|ref|YP_003422788.1|	-	0.0039	17.3	5.6	0.012	15.8	5.6	1.9	1	0	0	1	1	1	1	Haemolysin	XhlA
DUF4446	PF14584.6	gi|288559302|ref|YP_003422788.1|	-	0.02	14.9	1.3	0.049	13.6	1.3	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4446)
Bcr-Abl_Oligo	PF09036.10	gi|288559302|ref|YP_003422788.1|	-	0.035	14.1	0.8	0.075	13.0	0.8	1.5	1	0	0	1	1	1	0	Bcr-Abl	oncoprotein	oligomerisation	domain
SOAR	PF16533.5	gi|288559302|ref|YP_003422788.1|	-	0.053	13.5	3.6	0.089	12.8	3.6	1.3	1	0	0	1	1	1	0	STIM1	Orai1-activating	region
DUF3278	PF11683.8	gi|288559302|ref|YP_003422788.1|	-	0.069	13.2	2.5	0.67	10.0	1.4	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3278)
Uds1	PF15456.6	gi|288559302|ref|YP_003422788.1|	-	0.14	12.4	5.5	0.2	11.8	5.5	1.2	1	0	0	1	1	1	0	Up-regulated	During	Septation
SLATT_5	PF18160.1	gi|288559302|ref|YP_003422788.1|	-	0.3	10.4	7.0	0.37	10.1	1.0	2.5	2	1	0	2	2	2	0	SMODS	and	SLOG-associating	2TM	effector	domain	family	5
RIC3	PF15361.6	gi|288559302|ref|YP_003422788.1|	-	0.47	10.8	6.4	1.2	9.5	6.4	1.7	1	1	0	1	1	1	0	Resistance	to	inhibitors	of	cholinesterase	homologue	3
TMF_DNA_bd	PF12329.8	gi|288559302|ref|YP_003422788.1|	-	0.59	10.2	15.9	0.98	9.5	15.9	1.4	1	0	0	1	1	1	0	TATA	element	modulatory	factor	1	DNA	binding
V_ATPase_I	PF01496.19	gi|288559302|ref|YP_003422788.1|	-	3.4	5.5	6.9	5.2	4.8	6.9	1.2	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
EspB	PF05802.11	gi|288559302|ref|YP_003422788.1|	-	3.7	7.5	11.3	0.57	10.1	5.5	2.0	2	0	0	2	2	2	0	Enterobacterial	EspB	protein
DUF4407	PF14362.6	gi|288559302|ref|YP_003422788.1|	-	3.7	6.8	7.9	0.33	10.2	3.1	1.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4407)
Pox_A_type_inc	PF04508.12	gi|288559302|ref|YP_003422788.1|	-	4.6	7.3	6.1	0.31	11.0	1.1	1.7	2	0	0	2	2	2	0	Viral	A-type	inclusion	protein	repeat
Atg14	PF10186.9	gi|288559302|ref|YP_003422788.1|	-	5.1	6.1	8.6	6.7	5.7	8.6	1.1	1	0	0	1	1	1	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
UPF0181	PF03701.14	gi|288559303|ref|YP_003422789.1|	-	0.017	14.7	0.1	0.056	13.1	0.0	1.8	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0181)
MFS_1	PF07690.16	gi|288559304|ref|YP_003422790.1|	-	1.5e-38	132.7	49.2	3.8e-37	128.0	48.4	3.0	2	1	0	2	2	2	1	Major	Facilitator	Superfamily
MFS_3	PF05977.13	gi|288559304|ref|YP_003422790.1|	-	4.7e-09	35.2	11.9	4.7e-09	35.2	11.9	2.3	2	0	0	2	2	2	1	Transmembrane	secretion	effector
IBV_3A	PF03617.13	gi|288559304|ref|YP_003422790.1|	-	0.15	12.1	1.8	0.29	11.2	0.0	2.5	2	0	0	2	2	2	0	IBV	3A	protein
DUF389	PF04087.14	gi|288559305|ref|YP_003422791.1|	-	7e-39	133.1	6.0	1.2e-38	132.3	6.0	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF389)
PHO4	PF01384.20	gi|288559305|ref|YP_003422791.1|	-	0.033	13.3	4.0	0.041	12.9	4.0	1.2	1	0	0	1	1	1	0	Phosphate	transporter	family
DUF3781	PF12636.7	gi|288559306|ref|YP_003422792.1|	-	0.018	14.9	4.4	0.89	9.5	0.1	3.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3781)
Chlam_PMP	PF02415.17	gi|288559306|ref|YP_003422792.1|	-	0.034	14.6	0.1	0.034	14.6	0.1	8.2	8	1	0	8	8	8	0	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
HEAT_2	PF13646.6	gi|288559306|ref|YP_003422792.1|	-	0.13	12.7	0.4	1.6	9.1	0.1	2.8	2	1	0	2	2	2	0	HEAT	repeats
DUF1137	PF06587.11	gi|288559306|ref|YP_003422792.1|	-	0.28	11.2	11.8	0.21	11.6	0.4	5.4	3	3	4	7	7	7	0	Protein	of	unknown	function	(DUF1137)
DUF4116	PF13475.6	gi|288559306|ref|YP_003422792.1|	-	1.3	8.8	8.0	0.54	10.0	0.5	3.9	2	2	2	4	4	4	0	Domain	of	unknown	function	(DUF4116)
Phage_holin_4_2	PF04020.13	gi|288559307|ref|YP_003422793.1|	-	1.9e-06	28.5	16.0	3.7e-06	27.5	16.0	1.4	1	0	0	1	1	1	1	Mycobacterial	4	TMS	phage	holin,	superfamily	IV
Phosphodiest	PF01663.22	gi|288559307|ref|YP_003422793.1|	-	4.5e-05	23.2	0.3	0.00028	20.6	0.3	2.0	1	1	0	1	1	1	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
Sec3-PIP2_bind	PF15277.6	gi|288559309|ref|YP_003422795.1|	-	0.047	13.8	0.0	0.078	13.1	0.0	1.4	1	0	0	1	1	1	0	Exocyst	complex	component	SEC3	N-terminal	PIP2	binding	PH
Radical_SAM	PF04055.21	gi|288559310|ref|YP_003422796.1|	-	4.3e-14	53.2	0.0	6.5e-14	52.7	0.0	1.3	1	1	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|288559310|ref|YP_003422796.1|	-	2e-10	41.1	0.0	3.2e-10	40.4	0.0	1.3	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|288559310|ref|YP_003422796.1|	-	3.6e-07	30.3	0.0	6.4e-07	29.5	0.0	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
HeH	PF12949.7	gi|288559310|ref|YP_003422796.1|	-	0.14	11.9	0.0	0.46	10.2	0.0	1.9	2	0	0	2	2	2	0	HeH/LEM	domain
PhnA_Zn_Ribbon	PF08274.12	gi|288559311|ref|YP_003422797.1|	-	0.0097	15.8	1.5	0.03	14.3	1.5	1.9	1	0	0	1	1	1	1	PhnA	Zinc-Ribbon
CotJB	PF12652.7	gi|288559312|ref|YP_003422798.1|	-	0.0031	17.7	0.1	0.0093	16.2	0.0	1.8	2	0	0	2	2	2	1	CotJB	protein
CNOT1_TTP_bind	PF16417.5	gi|288559312|ref|YP_003422798.1|	-	0.046	12.9	0.3	0.16	11.1	0.0	1.8	2	0	0	2	2	2	0	CCR4-NOT	transcription	complex	subunit	1	TTP	binding	domain
Phage_Mu_F	PF04233.14	gi|288559315|ref|YP_003422801.1|	-	1.9e-11	44.7	0.0	6.5e-11	43.0	0.0	2.0	1	0	0	1	1	1	1	Phage	Mu	protein	F	like	protein
ADIP	PF11559.8	gi|288559315|ref|YP_003422801.1|	-	0.47	10.5	10.7	0.034	14.2	5.0	2.0	2	0	0	2	2	2	0	Afadin-	and	alpha	-actinin-Binding
Peptidase_S78_2	PF14550.6	gi|288559316|ref|YP_003422802.1|	-	1.8e-11	44.2	0.0	2.4e-11	43.8	0.0	1.2	1	0	0	1	1	1	1	Putative	phage	serine	protease	XkdF
NEAT	PF05031.12	gi|288559316|ref|YP_003422802.1|	-	0.097	13.3	0.6	0.16	12.6	0.6	1.5	1	1	0	1	1	1	0	Iron	Transport-associated	domain
DUF4926	PF16277.5	gi|288559316|ref|YP_003422802.1|	-	0.098	12.0	0.0	0.17	11.3	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4926)
Imm50	PF15594.6	gi|288559318|ref|YP_003422804.1|	-	0.11	12.7	0.9	0.38	11.0	0.6	1.9	2	0	0	2	2	2	0	Immunity	protein	50
DUF3578	PF12102.8	gi|288559320|ref|YP_003422806.1|	-	5.4e-21	75.0	0.0	1.9e-20	73.2	0.0	2.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3578)
AAA_5	PF07728.14	gi|288559320|ref|YP_003422806.1|	-	2.4e-07	30.8	0.0	0.013	15.5	0.0	2.8	2	0	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
AAA	PF00004.29	gi|288559320|ref|YP_003422806.1|	-	0.015	15.8	0.2	8.7	6.8	0.0	3.7	5	0	0	5	5	5	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.6	gi|288559320|ref|YP_003422806.1|	-	0.035	14.5	0.0	0.11	12.8	0.0	1.8	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_22	PF13401.6	gi|288559320|ref|YP_003422806.1|	-	0.064	13.5	0.0	0.7	10.2	0.0	2.6	2	0	0	2	2	2	0	AAA	domain
ABC_tran	PF00005.27	gi|288559320|ref|YP_003422806.1|	-	0.16	12.5	0.1	0.5	10.9	0.1	2.0	1	0	0	1	1	1	0	ABC	transporter
DUF2357	PF09823.9	gi|288559321|ref|YP_003422807.1|	-	3.2e-39	134.7	0.0	4.3e-39	134.3	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF2357)
PDDEXK_7	PF04411.12	gi|288559321|ref|YP_003422807.1|	-	8.2e-25	87.7	0.7	2.2e-24	86.3	0.7	1.8	1	1	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
Big_3_5	PF16640.5	gi|288559322|ref|YP_003422808.1|	-	4.4e-15	55.6	28.2	8.9e-08	32.2	6.1	5.0	5	0	0	5	5	5	3	Bacterial	Ig-like	domain	(group	3)
Lectin_like	PF18560.1	gi|288559322|ref|YP_003422808.1|	-	1.1e-13	51.6	4.7	1.1e-13	51.6	4.7	4.0	3	1	0	3	3	3	1	Lectin	like	domain
Big_1	PF02369.16	gi|288559322|ref|YP_003422808.1|	-	1.9e-11	43.8	17.5	1.5e-06	28.1	3.5	3.8	3	0	0	3	3	3	3	Bacterial	Ig-like	domain	(group	1)
Peptidase_C1	PF00112.23	gi|288559322|ref|YP_003422808.1|	-	4.1e-06	27.0	0.0	1.1e-05	25.6	0.0	1.7	1	0	0	1	1	1	1	Papain	family	cysteine	protease
Invasin_D3	PF09134.10	gi|288559322|ref|YP_003422808.1|	-	7.3e-06	26.2	23.0	0.0088	16.3	5.6	4.1	4	0	0	4	4	4	3	Invasin,	domain	3
MG4	PF17789.1	gi|288559322|ref|YP_003422808.1|	-	0.00037	20.6	2.8	0.0078	16.3	0.0	3.5	3	0	0	3	3	3	1	Macroglobulin	domain	MG4
YtkA	PF13115.6	gi|288559322|ref|YP_003422808.1|	-	0.22	12.2	2.3	0.63	10.7	0.6	2.6	2	0	0	2	2	2	0	YtkA-like
ADH_N	PF08240.12	gi|288559323|ref|YP_003422809.1|	-	3.8e-16	58.9	0.1	7.5e-16	58.0	0.1	1.5	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.26	gi|288559323|ref|YP_003422809.1|	-	5.1e-15	55.6	1.0	7.7e-15	55.0	1.0	1.3	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.6	gi|288559323|ref|YP_003422809.1|	-	3.2e-06	28.2	0.0	6.3e-06	27.3	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
Usp	PF00582.26	gi|288559323|ref|YP_003422809.1|	-	0.044	14.3	0.0	0.069	13.7	0.0	1.4	1	0	0	1	1	1	0	Universal	stress	protein	family
SpoIIE	PF07228.12	gi|288559324|ref|YP_003422810.1|	-	2.7e-43	148.2	0.0	4e-43	147.6	0.0	1.3	1	0	0	1	1	1	1	Stage	II	sporulation	protein	E	(SpoIIE)
DUF3341	PF11821.8	gi|288559324|ref|YP_003422810.1|	-	0.045	13.4	4.6	1.2	8.8	0.2	2.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3341)
Spc7	PF08317.11	gi|288559324|ref|YP_003422810.1|	-	0.16	10.8	0.6	0.29	10.0	0.6	1.3	1	0	0	1	1	1	0	Spc7	kinetochore	protein
STAS	PF01740.21	gi|288559325|ref|YP_003422811.1|	-	2.6e-12	46.4	0.2	2.9e-12	46.2	0.2	1.0	1	0	0	1	1	1	1	STAS	domain
STAS_2	PF13466.6	gi|288559325|ref|YP_003422811.1|	-	1.3e-09	38.2	0.0	1.6e-09	37.9	0.0	1.0	1	0	0	1	1	1	1	STAS	domain
AMP-binding	PF00501.28	gi|288559326|ref|YP_003422812.1|	-	4.6e-177	588.9	0.0	8.9e-91	304.6	0.0	2.1	2	0	0	2	2	2	2	AMP-binding	enzyme
Condensation	PF00668.20	gi|288559326|ref|YP_003422812.1|	-	5.3e-79	266.0	6.3	1.1e-52	179.2	0.1	5.6	4	2	1	5	5	5	3	Condensation	domain
NAD_binding_4	PF07993.12	gi|288559326|ref|YP_003422812.1|	-	1e-34	119.9	0.0	1.7e-34	119.1	0.0	1.4	1	0	0	1	1	1	1	Male	sterility	protein
PP-binding	PF00550.25	gi|288559326|ref|YP_003422812.1|	-	1.2e-17	64.0	5.5	1.5e-09	38.0	0.1	3.6	3	0	0	3	3	3	2	Phosphopantetheine	attachment	site
Epimerase	PF01370.21	gi|288559326|ref|YP_003422812.1|	-	8.7e-16	58.1	0.0	2.2e-15	56.8	0.0	1.7	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
AMP-binding_C	PF13193.6	gi|288559326|ref|YP_003422812.1|	-	2.6e-12	47.5	0.0	3.4e-05	24.7	0.0	2.8	2	0	0	2	2	2	2	AMP-binding	enzyme	C-terminal	domain
3Beta_HSD	PF01073.19	gi|288559326|ref|YP_003422812.1|	-	3.4e-07	29.6	0.2	7.1e-07	28.5	0.2	1.5	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
GDP_Man_Dehyd	PF16363.5	gi|288559326|ref|YP_003422812.1|	-	8.3e-06	25.4	0.1	1.5e-05	24.6	0.1	1.4	1	0	0	1	1	1	1	GDP-mannose	4,6	dehydratase
NAD_binding_10	PF13460.6	gi|288559326|ref|YP_003422812.1|	-	0.00012	22.0	0.0	0.00036	20.5	0.0	1.8	1	1	0	1	1	1	1	NAD(P)H-binding
RmlD_sub_bind	PF04321.17	gi|288559326|ref|YP_003422812.1|	-	0.00062	19.0	0.0	0.0014	17.8	0.0	1.5	2	0	0	2	2	2	1	RmlD	substrate	binding	domain
DUF4358	PF14270.6	gi|288559326|ref|YP_003422812.1|	-	0.097	13.0	1.5	1.2	9.4	0.1	3.8	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4358)
EF-hand_1	PF00036.32	gi|288559326|ref|YP_003422812.1|	-	0.83	9.4	3.4	6.1	6.6	0.5	3.9	3	0	0	3	3	3	0	EF	hand
EF-hand_5	PF13202.6	gi|288559326|ref|YP_003422812.1|	-	5.9	6.6	8.3	0.38	10.3	0.7	3.1	3	0	0	3	3	3	0	EF	hand
MatE	PF01554.18	gi|288559327|ref|YP_003422813.1|	-	3.6e-26	91.8	42.7	2e-16	60.1	15.3	2.7	3	0	0	3	3	3	2	MatE
Polysacc_synt_C	PF14667.6	gi|288559327|ref|YP_003422813.1|	-	4.8e-10	39.7	32.4	4.8e-08	33.2	16.3	4.3	3	2	1	4	4	4	2	Polysaccharide	biosynthesis	C-terminal	domain
Tmpp129	PF10272.9	gi|288559327|ref|YP_003422813.1|	-	0.22	10.8	0.8	0.61	9.3	0.8	1.7	1	0	0	1	1	1	0	Putative	transmembrane	protein	precursor
5TM-5TMR_LYT	PF07694.12	gi|288559329|ref|YP_003422815.1|	-	4.5e-32	110.9	14.3	4.5e-32	110.9	14.3	2.6	1	1	1	2	2	2	1	5TMR	of	5TMR-LYT
Phage_holin_3_3	PF16083.5	gi|288559329|ref|YP_003422815.1|	-	0.024	14.7	0.4	0.024	14.7	0.4	2.6	2	1	1	3	3	3	0	LydA	holin	phage,	holin	superfamily	III
Chalcone_3	PF16036.5	gi|288559329|ref|YP_003422815.1|	-	0.032	14.3	0.4	0.055	13.6	0.4	1.3	1	0	0	1	1	1	0	Chalcone	isomerase-like
DUF2681	PF10883.8	gi|288559329|ref|YP_003422815.1|	-	0.047	14.1	0.0	0.13	12.6	0.0	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2681)
Pox_A_type_inc	PF04508.12	gi|288559329|ref|YP_003422815.1|	-	0.086	12.7	0.4	0.19	11.6	0.4	1.5	1	0	0	1	1	1	0	Viral	A-type	inclusion	protein	repeat
ZapB	PF06005.12	gi|288559329|ref|YP_003422815.1|	-	0.46	11.0	6.3	0.68	10.4	6.3	1.2	1	0	0	1	1	1	0	Cell	division	protein	ZapB
HR1	PF02185.16	gi|288559329|ref|YP_003422815.1|	-	0.6	10.3	4.1	3.3	7.9	0.6	2.2	1	1	1	2	2	2	0	Hr1	repeat
DUF1664	PF07889.12	gi|288559329|ref|YP_003422815.1|	-	1.1	9.4	3.1	0.7	9.9	1.3	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
Halogen_Hydrol	PF10112.9	gi|288559329|ref|YP_003422815.1|	-	4	7.4	9.2	2.3	8.2	2.7	3.5	1	1	1	2	2	2	0	5-bromo-4-chloroindolyl	phosphate	hydrolysis	protein
Big_3_5	PF16640.5	gi|288559330|ref|YP_003422816.1|	-	3.3e-32	110.5	37.7	5.8e-10	39.2	4.0	6.8	6	0	0	6	6	6	5	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|288559330|ref|YP_003422816.1|	-	3.4e-26	91.0	25.5	7.9e-08	32.2	2.0	7.3	6	1	0	6	6	6	6	Bacterial	Ig-like	domain	(group	1)
CarboxypepD_reg	PF13620.6	gi|288559330|ref|YP_003422816.1|	-	1.3e-21	76.7	24.3	0.00018	21.7	0.4	7.2	6	2	0	6	6	6	6	Carboxypeptidase	regulatory-like	domain
MG4	PF17789.1	gi|288559330|ref|YP_003422816.1|	-	4.6e-15	55.5	3.7	0.0016	18.5	0.0	6.9	7	0	0	7	7	7	4	Macroglobulin	domain	MG4
Invasin_D3	PF09134.10	gi|288559330|ref|YP_003422816.1|	-	3.9e-14	52.7	40.1	4.4e-05	23.7	5.0	6.9	7	0	0	7	7	7	4	Invasin,	domain	3
DUF824	PF05688.11	gi|288559330|ref|YP_003422816.1|	-	4.5e-07	29.6	6.5	1	9.3	0.0	6.3	5	0	0	5	5	5	3	Salmonella	repeat	of	unknown	function	(DUF824)
Ig_2	PF13895.6	gi|288559330|ref|YP_003422816.1|	-	0.013	15.8	0.2	0.013	15.8	0.2	2.6	3	0	0	3	3	3	0	Immunoglobulin	domain
ig	PF00047.25	gi|288559330|ref|YP_003422816.1|	-	0.022	14.9	0.1	0.094	12.9	0.1	2.0	1	0	0	1	1	1	0	Immunoglobulin	domain
Lsr2	PF11774.8	gi|288559330|ref|YP_003422816.1|	-	0.051	13.7	0.0	15	5.8	0.0	3.5	3	0	0	3	3	3	0	Lsr2
Pilin_N	PF07790.11	gi|288559330|ref|YP_003422816.1|	-	0.067	14.1	9.3	25	5.9	0.1	5.3	5	0	0	5	5	5	0	Archaeal	Type	IV	pilin,	N-terminal
DUF5627	PF18620.1	gi|288559330|ref|YP_003422816.1|	-	6.9	6.5	15.6	0.14	12.1	0.5	4.6	5	1	1	6	6	6	0	Family	of	unknown	function	(DUF5627)
HATPase_c_4	PF13749.6	gi|288559331|ref|YP_003422817.1|	-	5.2e-23	81.0	0.0	1.1e-22	80.0	0.0	1.6	1	0	0	1	1	1	1	Putative	ATP-dependent	DNA	helicase	recG	C-terminal
DUF4062	PF13271.6	gi|288559331|ref|YP_003422817.1|	-	7.5e-17	61.5	0.4	2.4e-16	59.8	0.4	1.9	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4062)
HTH_DeoR	PF08220.12	gi|288559331|ref|YP_003422817.1|	-	9e-05	22.1	0.0	0.00026	20.7	0.0	1.7	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
TrmB	PF01978.19	gi|288559331|ref|YP_003422817.1|	-	0.00021	21.1	0.7	0.00065	19.5	0.7	1.9	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_11	PF08279.12	gi|288559331|ref|YP_003422817.1|	-	0.063	13.2	0.5	0.3	11.1	0.1	2.2	2	0	0	2	2	2	0	HTH	domain
Fe_dep_repress	PF01325.19	gi|288559331|ref|YP_003422817.1|	-	0.11	12.7	0.2	0.43	10.8	0.1	1.9	2	0	0	2	2	2	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Bro-N	PF02498.17	gi|288559332|ref|YP_003422818.1|	-	2.8e-06	27.9	0.1	4.7e-06	27.2	0.1	1.4	1	0	0	1	1	1	1	BRO	family,	N-terminal	domain
RNA_binding	PF01877.17	gi|288559332|ref|YP_003422818.1|	-	0.0061	16.8	0.1	0.012	15.8	0.1	1.6	1	1	0	1	1	1	1	RNA	binding
AAA_14	PF13173.6	gi|288559333|ref|YP_003422819.1|	-	5.2e-37	126.8	2.7	6.4e-37	126.5	0.8	2.2	2	1	0	2	2	2	1	AAA	domain
DUF4143	PF13635.6	gi|288559333|ref|YP_003422819.1|	-	4.3e-08	33.4	0.2	8.1e-08	32.5	0.2	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
FUR	PF01475.19	gi|288559333|ref|YP_003422819.1|	-	7.7e-06	26.0	0.1	1.9e-05	24.8	0.1	1.7	1	0	0	1	1	1	1	Ferric	uptake	regulator	family
ATPase_2	PF01637.18	gi|288559333|ref|YP_003422819.1|	-	0.0004	20.4	2.6	0.001	19.1	2.0	1.9	1	1	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
DUF87	PF01935.17	gi|288559333|ref|YP_003422819.1|	-	0.00081	19.5	0.1	0.0042	17.2	0.1	2.1	1	1	0	1	1	1	1	Helicase	HerA,	central	domain
HTH_22	PF13309.6	gi|288559333|ref|YP_003422819.1|	-	0.004	17.2	0.6	1	9.5	0.0	3.6	4	0	0	4	4	4	1	HTH	domain
PDDEXK_5	PF11645.8	gi|288559333|ref|YP_003422819.1|	-	0.013	15.4	0.0	0.023	14.7	0.0	1.4	1	0	0	1	1	1	0	PD-(D/E)XK	endonuclease
ACDC	PF14733.6	gi|288559333|ref|YP_003422819.1|	-	0.044	14.1	0.3	0.12	12.7	0.3	1.9	1	0	0	1	1	1	0	AP2-coincident	C-terminal
Yqai	PF09466.10	gi|288559333|ref|YP_003422819.1|	-	0.85	10.0	2.8	27	5.2	0.1	2.9	1	1	1	2	2	2	0	Hypothetical	protein	Yqai
Big_3_5	PF16640.5	gi|288559334|ref|YP_003422820.1|	-	4.4e-50	167.8	135.3	1.6e-08	34.6	2.6	16.8	15	2	2	17	17	14	10	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|288559334|ref|YP_003422820.1|	-	3.6e-34	116.6	88.9	4.9e-08	32.9	5.8	15.0	12	1	1	13	13	13	11	Bacterial	Ig-like	domain	(group	1)
Invasin_D3	PF09134.10	gi|288559334|ref|YP_003422820.1|	-	1.7e-13	50.6	95.1	0.00016	21.9	10.3	14.3	11	3	2	14	14	13	5	Invasin,	domain	3
FeThRed_A	PF02941.15	gi|288559334|ref|YP_003422820.1|	-	6.7e-06	26.1	0.3	1.1	9.4	0.0	4.8	3	1	1	4	4	4	2	Ferredoxin	thioredoxin	reductase	variable	alpha	chain
DUF3110	PF11360.8	gi|288559334|ref|YP_003422820.1|	-	0.00025	21.2	1.4	24	5.2	0.0	4.5	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF3110)
CE2_N	PF17996.1	gi|288559334|ref|YP_003422820.1|	-	0.0032	17.4	16.4	0.43	10.6	0.0	7.8	10	0	0	10	10	10	2	Carbohydrate	esterase	2	N-terminal
ig	PF00047.25	gi|288559334|ref|YP_003422820.1|	-	0.0033	17.6	0.3	0.019	15.1	0.8	2.1	2	0	0	2	2	1	1	Immunoglobulin	domain
Porphyrn_cat_1	PF18206.1	gi|288559334|ref|YP_003422820.1|	-	0.0035	18.0	21.3	0.28	11.8	0.0	5.8	6	0	0	6	6	5	3	Porphyranase	catalytic	subdomain	1
HigB-like_toxin	PF05015.13	gi|288559334|ref|YP_003422820.1|	-	0.029	14.8	0.0	24	5.4	0.0	4.4	4	0	0	4	4	4	0	RelE-like	toxin	of	type	II	toxin-antitoxin	system	HigB
MetallophosN	PF16371.5	gi|288559334|ref|YP_003422820.1|	-	0.03	14.6	12.9	7.8	6.8	0.2	5.6	5	0	0	5	5	5	0	N	terminal	of	Calcineurin-like	phosphoesterase
Ig_2	PF13895.6	gi|288559334|ref|YP_003422820.1|	-	0.048	14.0	1.5	0.24	11.7	0.4	2.9	2	0	0	2	2	2	0	Immunoglobulin	domain
YtkA	PF13115.6	gi|288559334|ref|YP_003422820.1|	-	0.14	12.7	35.1	0.049	14.2	0.8	10.5	11	0	0	11	11	10	0	YtkA-like
fn3_3	PF14686.6	gi|288559334|ref|YP_003422820.1|	-	0.18	11.6	19.5	0.4	10.5	0.0	6.8	6	1	0	6	6	6	0	Polysaccharide	lyase	family	4,	domain	II
DUF4853	PF16145.5	gi|288559334|ref|YP_003422820.1|	-	0.3	11.2	4.9	0.31	11.2	0.5	3.2	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4853)
Big_1	PF02369.16	gi|288559335|ref|YP_003422821.1|	-	5.2e-36	122.5	76.5	3.7e-07	30.1	4.2	13.9	13	1	0	13	13	13	9	Bacterial	Ig-like	domain	(group	1)
CarboxypepD_reg	PF13620.6	gi|288559335|ref|YP_003422821.1|	-	2.7e-20	72.4	64.1	0.00077	19.7	0.2	12.1	12	0	0	12	12	12	8	Carboxypeptidase	regulatory-like	domain
Big_3_5	PF16640.5	gi|288559335|ref|YP_003422821.1|	-	5.2e-07	29.8	13.2	6.2e-07	29.5	8.2	13.0	14	1	3	17	17	17	2	Bacterial	Ig-like	domain	(group	3)
MG4	PF17789.1	gi|288559335|ref|YP_003422821.1|	-	1.6e-05	24.9	40.1	0.57	10.4	0.0	10.7	12	0	0	12	12	12	3	Macroglobulin	domain	MG4
Invasin_D3	PF09134.10	gi|288559335|ref|YP_003422821.1|	-	7.9e-05	22.9	94.0	0.0058	16.9	8.8	13.8	14	0	0	14	14	14	5	Invasin,	domain	3
YtkA	PF13115.6	gi|288559335|ref|YP_003422821.1|	-	0.00034	21.2	12.2	0.12	13.0	0.6	8.1	8	0	0	8	8	8	1	YtkA-like
bMG3	PF11974.8	gi|288559335|ref|YP_003422821.1|	-	0.009	16.0	25.9	1.1	9.3	0.3	8.6	7	1	1	8	8	8	2	Bacterial	alpha-2-macroglobulin	MG3	domain
Porphyrn_cat_1	PF18206.1	gi|288559335|ref|YP_003422821.1|	-	0.039	14.6	3.2	14	6.4	0.0	4.3	5	0	0	5	5	5	0	Porphyranase	catalytic	subdomain	1
B_solenoid_ydck	PF18836.1	gi|288559335|ref|YP_003422821.1|	-	0.99	9.4	6.2	55	3.9	0.1	4.9	3	0	0	3	3	3	0	Beta	solenoid	repeat	from	YDCK
IMCp	PF12314.8	gi|288559335|ref|YP_003422821.1|	-	1.8	8.9	8.9	0.4	11.0	0.5	3.3	3	0	0	3	3	3	0	Inner	membrane	complex	protein
Virulence_RhuM	PF13310.6	gi|288559336|ref|YP_003422822.1|	-	1.2e-108	362.1	9.4	1.5e-108	361.9	9.4	1.1	1	0	0	1	1	1	1	Virulence	protein	RhuM	family
Big_3_5	PF16640.5	gi|288559337|ref|YP_003422823.1|	-	9.7e-23	80.2	45.5	1.1e-06	28.7	3.8	10.0	9	1	2	11	11	11	6	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|288559337|ref|YP_003422823.1|	-	2.8e-09	36.9	60.0	1.2e-08	34.9	1.7	9.1	7	2	2	9	9	9	4	Bacterial	Ig-like	domain	(group	1)
MG4	PF17789.1	gi|288559337|ref|YP_003422823.1|	-	0.00057	20.0	10.6	0.45	10.7	0.0	5.7	6	1	0	6	6	6	2	Macroglobulin	domain	MG4
Agarase_CBM	PF17992.1	gi|288559337|ref|YP_003422823.1|	-	0.0036	16.9	0.6	0.021	14.4	0.2	2.5	2	0	0	2	2	2	1	Agarase	CBM	like	domain
YtkA	PF13115.6	gi|288559337|ref|YP_003422823.1|	-	0.45	11.2	14.0	0.4	11.3	0.2	6.0	6	1	0	6	6	6	0	YtkA-like
Filamin	PF00630.19	gi|288559337|ref|YP_003422823.1|	-	1.3	9.8	19.5	14	6.6	4.4	6.2	4	2	0	4	4	4	0	Filamin/ABP280	repeat
AAA_16	PF13191.6	gi|288559338|ref|YP_003422824.1|	-	5.1e-10	40.0	0.0	9.2e-10	39.2	0.0	1.4	1	0	0	1	1	1	1	AAA	ATPase	domain
ATPase_2	PF01637.18	gi|288559338|ref|YP_003422824.1|	-	0.0001	22.3	0.9	0.00023	21.2	0.9	1.6	1	0	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
AAA_22	PF13401.6	gi|288559338|ref|YP_003422824.1|	-	0.014	15.6	0.1	0.32	11.3	0.0	2.8	2	1	0	2	2	2	0	AAA	domain
G3P_antiterm	PF04309.12	gi|288559338|ref|YP_003422824.1|	-	0.028	13.8	1.0	0.082	12.3	0.2	2.0	2	0	0	2	2	2	0	Glycerol-3-phosphate	responsive	antiterminator
AAA_14	PF13173.6	gi|288559338|ref|YP_003422824.1|	-	0.032	14.2	0.8	0.59	10.2	0.6	2.6	1	1	1	2	2	2	0	AAA	domain
DUF815	PF05673.13	gi|288559338|ref|YP_003422824.1|	-	0.034	13.3	0.0	0.12	11.5	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF815)
AAA_10	PF12846.7	gi|288559338|ref|YP_003422824.1|	-	0.061	12.2	1.1	0.34	9.8	0.1	2.1	2	0	0	2	2	2	0	AAA-like	domain
DUF2791	PF10923.8	gi|288559338|ref|YP_003422824.1|	-	0.068	12.0	0.3	0.45	9.3	0.0	1.9	1	1	1	2	2	2	0	P-loop	Domain	of	unknown	function	(DUF2791)
ATP-synt_ab	PF00006.25	gi|288559338|ref|YP_003422824.1|	-	0.18	11.5	0.0	0.33	10.6	0.0	1.4	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
CarboxypepD_reg	PF13620.6	gi|288559339|ref|YP_003422825.1|	-	1.2e-05	25.5	4.0	0.00022	21.4	0.0	2.7	2	1	1	3	3	3	1	Carboxypeptidase	regulatory-like	domain
DUF4198	PF10670.9	gi|288559339|ref|YP_003422825.1|	-	0.0012	19.2	0.0	0.0042	17.5	0.0	1.7	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4198)
SpaA	PF17802.1	gi|288559339|ref|YP_003422825.1|	-	0.0058	16.9	0.1	0.0058	16.9	0.1	2.3	1	1	1	2	2	2	1	Prealbumin-like	fold	domain
Big_1	PF02369.16	gi|288559339|ref|YP_003422825.1|	-	0.0074	16.3	4.4	0.011	15.7	0.0	2.6	3	0	0	3	3	3	1	Bacterial	Ig-like	domain	(group	1)
Pilin_N	PF07790.11	gi|288559339|ref|YP_003422825.1|	-	0.0083	17.0	0.5	0.03	15.2	0.0	2.0	2	0	0	2	2	2	1	Archaeal	Type	IV	pilin,	N-terminal
Big_3_5	PF16640.5	gi|288559339|ref|YP_003422825.1|	-	0.011	15.9	3.4	0.057	13.6	0.1	2.2	1	1	1	2	2	2	0	Bacterial	Ig-like	domain	(group	3)
DUF3139	PF11337.8	gi|288559339|ref|YP_003422825.1|	-	0.013	16.2	0.3	0.037	14.7	0.3	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3139)
CarbopepD_reg_2	PF13715.6	gi|288559339|ref|YP_003422825.1|	-	0.016	15.2	4.1	0.038	14.0	2.1	2.4	1	1	1	2	2	2	0	CarboxypepD_reg-like	domain
ABC2_membrane_3	PF12698.7	gi|288559339|ref|YP_003422825.1|	-	0.024	13.7	0.7	0.034	13.3	0.7	1.2	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
MG2	PF01835.19	gi|288559339|ref|YP_003422825.1|	-	0.025	15.0	1.3	0.11	12.9	0.0	2.5	2	1	1	3	3	2	0	MG2	domain
SdrD_B	PF17210.3	gi|288559339|ref|YP_003422825.1|	-	0.04	14.2	7.9	0.069	13.4	0.2	2.5	1	1	1	2	2	2	0	SdrD	B-like	domain
DUF2606	PF10794.9	gi|288559339|ref|YP_003422825.1|	-	0.04	13.7	1.7	0.12	12.2	1.7	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2606)
SVM_signal	PF12113.8	gi|288559339|ref|YP_003422825.1|	-	1.1	9.3	3.6	1.8	8.5	3.6	1.3	1	0	0	1	1	1	0	SVM	protein	signal	sequence
Big_3_5	PF16640.5	gi|288559340|ref|YP_003422826.1|	-	3.5e-24	84.8	20.5	0.0014	18.8	0.1	7.2	7	0	0	7	7	7	6	Bacterial	Ig-like	domain	(group	3)
CarboxypepD_reg	PF13620.6	gi|288559340|ref|YP_003422826.1|	-	8.5e-12	45.2	7.1	0.0077	16.5	0.1	5.4	5	0	0	5	5	5	3	Carboxypeptidase	regulatory-like	domain
Big_1	PF02369.16	gi|288559340|ref|YP_003422826.1|	-	4.4e-10	39.4	32.6	1.8e-05	24.7	2.4	6.8	7	1	1	8	8	8	3	Bacterial	Ig-like	domain	(group	1)
Invasin_D3	PF09134.10	gi|288559340|ref|YP_003422826.1|	-	4e-07	30.3	20.9	0.046	14.0	0.2	7.0	6	1	2	8	8	8	3	Invasin,	domain	3
MG4	PF17789.1	gi|288559340|ref|YP_003422826.1|	-	7.2e-07	29.3	6.2	0.013	15.6	0.0	4.7	4	1	1	5	5	5	2	Macroglobulin	domain	MG4
PapC_C	PF13953.6	gi|288559340|ref|YP_003422826.1|	-	0.00022	21.0	0.5	0.15	11.9	0.0	3.4	2	1	0	2	2	2	2	PapC	C-terminal	domain
DUF824	PF05688.11	gi|288559340|ref|YP_003422826.1|	-	0.021	14.6	1.0	2.9	7.8	0.1	3.2	3	0	0	3	3	3	0	Salmonella	repeat	of	unknown	function	(DUF824)
Filamin	PF00630.19	gi|288559340|ref|YP_003422826.1|	-	0.055	14.3	8.3	2.8	8.8	1.5	5.4	2	2	1	3	3	3	0	Filamin/ABP280	repeat
Pilin	PF00114.19	gi|288559340|ref|YP_003422826.1|	-	0.24	12.3	4.2	0.35	11.8	0.7	3.0	2	1	0	2	2	2	0	Pilin	(bacterial	filament)
Lsr2	PF11774.8	gi|288559340|ref|YP_003422826.1|	-	0.89	9.7	2.8	33	4.7	0.5	3.4	3	0	0	3	3	3	0	Lsr2
Big_1	PF02369.16	gi|288559341|ref|YP_003422827.1|	-	1.5e-13	50.6	6.5	1.3e-09	37.9	4.6	2.8	2	0	0	2	2	2	2	Bacterial	Ig-like	domain	(group	1)
Big_3_5	PF16640.5	gi|288559341|ref|YP_003422827.1|	-	2e-12	47.1	13.0	3.1e-08	33.7	7.8	2.5	2	0	0	2	2	2	2	Bacterial	Ig-like	domain	(group	3)
Invasin_D3	PF09134.10	gi|288559341|ref|YP_003422827.1|	-	8.3e-10	38.8	13.8	4.5e-07	30.1	9.2	2.6	2	1	1	3	3	3	2	Invasin,	domain	3
CarboxypepD_reg	PF13620.6	gi|288559341|ref|YP_003422827.1|	-	6.2e-08	32.8	4.9	0.00077	19.7	0.1	2.5	2	0	0	2	2	2	2	Carboxypeptidase	regulatory-like	domain
MG4	PF17789.1	gi|288559341|ref|YP_003422827.1|	-	1.2e-07	31.8	0.9	0.0041	17.2	0.0	2.7	2	1	0	2	2	2	2	Macroglobulin	domain	MG4
GldH_lipo	PF14109.6	gi|288559341|ref|YP_003422827.1|	-	0.05	14.4	0.3	0.49	11.2	0.0	2.3	1	1	1	2	2	2	0	GldH	lipoprotein
Glyco_hydro_79C	PF16862.5	gi|288559341|ref|YP_003422827.1|	-	0.057	14.3	3.6	0.13	13.1	2.6	2.2	1	1	1	2	2	2	0	Glycosyl	hydrolase	family	79	C-terminal	beta	domain
Cytomega_UL20A	PF05984.12	gi|288559341|ref|YP_003422827.1|	-	0.93	9.8	9.9	2.3	8.5	0.4	3.0	2	1	1	3	3	3	0	Cytomegalovirus	UL20A	protein
Big_1	PF02369.16	gi|288559342|ref|YP_003422828.1|	-	7.5e-31	105.9	153.2	1.5e-07	31.3	6.6	18.7	17	0	0	17	17	17	10	Bacterial	Ig-like	domain	(group	1)
CarboxypepD_reg	PF13620.6	gi|288559342|ref|YP_003422828.1|	-	7.1e-18	64.7	73.4	0.0011	19.2	2.9	12.8	11	0	0	11	11	11	7	Carboxypeptidase	regulatory-like	domain
Big_3_5	PF16640.5	gi|288559342|ref|YP_003422828.1|	-	7.5e-11	42.1	30.8	2e-08	34.3	10.7	20.7	16	3	3	20	20	20	7	Bacterial	Ig-like	domain	(group	3)
MG4	PF17789.1	gi|288559342|ref|YP_003422828.1|	-	2.7e-10	40.3	30.1	0.55	10.4	0.1	11.0	10	0	0	10	10	10	5	Macroglobulin	domain	MG4
Beta_helix	PF13229.6	gi|288559342|ref|YP_003422828.1|	-	5.5e-08	32.8	83.3	2e-05	24.5	15.4	20.1	9	9	9	18	18	18	7	Right	handed	beta	helix	region
Invasin_D3	PF09134.10	gi|288559342|ref|YP_003422828.1|	-	0.0009	19.5	10.8	0.0009	19.5	10.8	17.3	17	1	1	18	18	18	10	Invasin,	domain	3
DUF4198	PF10670.9	gi|288559342|ref|YP_003422828.1|	-	0.0041	17.5	23.9	0.7	10.2	0.2	7.4	7	1	0	7	7	7	2	Domain	of	unknown	function	(DUF4198)
YtkA	PF13115.6	gi|288559342|ref|YP_003422828.1|	-	0.0063	17.1	24.0	12	6.5	0.9	8.3	7	0	0	7	7	7	1	YtkA-like
SRP9-21	PF05486.12	gi|288559342|ref|YP_003422828.1|	-	0.16	12.4	8.9	13	6.3	0.0	4.6	4	0	0	4	4	4	0	Signal	recognition	particle	9	kDa	protein	(SRP9)
Big_3_5	PF16640.5	gi|288559343|ref|YP_003422829.1|	-	4.7e-38	129.3	42.5	1.5e-09	37.9	5.8	12.3	13	0	0	13	13	13	8	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|288559343|ref|YP_003422829.1|	-	7.5e-20	70.7	30.8	1.9e-08	34.1	2.6	10.2	11	0	0	11	11	11	5	Bacterial	Ig-like	domain	(group	1)
CarboxypepD_reg	PF13620.6	gi|288559343|ref|YP_003422829.1|	-	1.1e-18	67.3	13.5	0.0025	18.1	0.7	10.0	10	0	0	10	10	10	4	Carboxypeptidase	regulatory-like	domain
MG4	PF17789.1	gi|288559343|ref|YP_003422829.1|	-	6.1e-08	32.7	1.0	0.011	15.8	0.3	4.3	3	0	0	3	3	3	2	Macroglobulin	domain	MG4
Invasin_D3	PF09134.10	gi|288559343|ref|YP_003422829.1|	-	3.3e-06	27.3	9.5	3.3e-06	27.3	9.5	8.0	9	0	0	9	9	9	3	Invasin,	domain	3
Beta_helix	PF13229.6	gi|288559343|ref|YP_003422829.1|	-	0.00017	21.4	23.5	0.00017	21.4	23.5	11.6	4	2	7	12	12	12	3	Right	handed	beta	helix	region
APC_N_CC	PF16689.5	gi|288559343|ref|YP_003422829.1|	-	4.9	7.3	6.5	13	5.9	6.5	1.7	1	0	0	1	1	1	0	Coiled-coil	N-terminus	of	APC,	dimerisation	domain
Big_1	PF02369.16	gi|288559344|ref|YP_003422830.1|	-	2.6e-26	91.4	70.9	6.4e-07	29.3	6.1	12.9	12	1	0	12	12	12	9	Bacterial	Ig-like	domain	(group	1)
Big_3_5	PF16640.5	gi|288559344|ref|YP_003422830.1|	-	7.2e-18	64.6	87.9	2.5e-08	34.0	8.8	14.5	14	1	0	14	14	14	6	Bacterial	Ig-like	domain	(group	3)
CarboxypepD_reg	PF13620.6	gi|288559344|ref|YP_003422830.1|	-	2.1e-12	47.2	43.3	0.0018	18.5	0.6	9.8	10	0	0	10	10	10	5	Carboxypeptidase	regulatory-like	domain
Invasin_D3	PF09134.10	gi|288559344|ref|YP_003422830.1|	-	2.2e-10	40.7	77.5	0.00042	20.6	7.2	13.0	12	0	0	12	12	12	8	Invasin,	domain	3
CarbopepD_reg_2	PF13715.6	gi|288559344|ref|YP_003422830.1|	-	2.4e-06	27.4	29.2	0.015	15.3	0.2	8.6	7	0	0	7	7	7	3	CarboxypepD_reg-like	domain
Beta_helix	PF13229.6	gi|288559344|ref|YP_003422830.1|	-	1.1e-05	25.3	22.5	1.1e-05	25.3	22.5	15.4	8	5	7	15	15	15	8	Right	handed	beta	helix	region
DUF4198	PF10670.9	gi|288559344|ref|YP_003422830.1|	-	0.0044	17.4	5.5	9.4	6.5	0.4	5.2	4	1	1	5	5	5	1	Domain	of	unknown	function	(DUF4198)
Pilin_N	PF07790.11	gi|288559344|ref|YP_003422830.1|	-	0.043	14.7	3.9	0.19	12.7	0.5	4.2	3	0	0	3	3	3	0	Archaeal	Type	IV	pilin,	N-terminal
YtkA	PF13115.6	gi|288559344|ref|YP_003422830.1|	-	0.058	14.0	2.1	0.7	10.5	0.8	3.5	2	0	0	2	2	2	0	YtkA-like
Amidohydro_1	PF01979.20	gi|288559345|ref|YP_003422831.1|	-	6.3e-84	282.2	1.2	7.5e-84	282.0	1.2	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.11	gi|288559345|ref|YP_003422831.1|	-	5.5e-21	75.6	0.0	2.1e-14	53.8	0.0	2.4	2	1	0	2	2	2	2	Amidohydrolase	family
FAD_binding_2	PF00890.24	gi|288559346|ref|YP_003422832.1|	-	1.4e-99	334.0	1.4	1.7e-99	333.8	1.4	1.1	1	0	0	1	1	1	1	FAD	binding	domain
Succ_DH_flav_C	PF02910.20	gi|288559346|ref|YP_003422832.1|	-	3.3e-28	98.2	0.8	6.4e-28	97.3	0.8	1.4	1	0	0	1	1	1	1	Fumarate	reductase	flavoprotein	C-term
Pyr_redox_2	PF07992.14	gi|288559346|ref|YP_003422832.1|	-	5e-07	29.2	1.2	0.00092	18.5	0.3	2.8	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.14	gi|288559346|ref|YP_003422832.1|	-	0.00033	19.5	2.7	0.056	12.1	0.5	2.7	3	0	0	3	3	3	2	HI0933-like	protein
DAO	PF01266.24	gi|288559346|ref|YP_003422832.1|	-	0.0018	17.9	0.8	0.0095	15.5	0.5	2.2	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
FAD_binding_3	PF01494.19	gi|288559346|ref|YP_003422832.1|	-	0.01	15.1	0.1	0.017	14.4	0.1	1.3	1	0	0	1	1	1	0	FAD	binding	domain
FAD_oxidored	PF12831.7	gi|288559346|ref|YP_003422832.1|	-	0.01	15.2	3.2	0.029	13.7	0.8	2.4	2	0	0	2	2	2	0	FAD	dependent	oxidoreductase
GIDA	PF01134.22	gi|288559346|ref|YP_003422832.1|	-	0.025	13.7	4.4	0.026	13.6	0.5	2.6	3	0	0	3	3	3	0	Glucose	inhibited	division	protein	A
Thi4	PF01946.17	gi|288559346|ref|YP_003422832.1|	-	0.03	13.6	4.4	0.056	12.7	0.7	2.7	3	0	0	3	3	3	0	Thi4	family
TBCA	PF02970.16	gi|288559346|ref|YP_003422832.1|	-	0.28	11.6	2.9	0.64	10.4	2.9	1.6	1	0	0	1	1	1	0	Tubulin	binding	cofactor	A
DHBP_synthase	PF00926.19	gi|288559347|ref|YP_003422833.1|	-	2.1e-79	265.5	0.3	2.4e-79	265.3	0.3	1.0	1	0	0	1	1	1	1	3,4-dihydroxy-2-butanone	4-phosphate	synthase
Chlam_PMP	PF02415.17	gi|288559348|ref|YP_003422834.1|	-	4.4e-09	36.3	54.3	0.022	15.2	2.1	9.0	9	0	0	9	9	9	5	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
CobN-Mg_chel	PF02514.16	gi|288559348|ref|YP_003422834.1|	-	0.0003	18.7	0.5	0.00042	18.2	0.5	1.1	1	0	0	1	1	1	1	CobN/Magnesium	Chelatase
Big_3_5	PF16640.5	gi|288559348|ref|YP_003422834.1|	-	0.0087	16.2	7.6	0.022	14.9	6.6	2.2	2	0	0	2	2	2	1	Bacterial	Ig-like	domain	(group	3)
Erf4	PF10256.9	gi|288559348|ref|YP_003422834.1|	-	0.018	15.2	5.9	0.053	13.6	1.0	2.6	1	1	1	2	2	2	0	Golgin	subfamily	A	member	7/ERF4	family
Pentapeptide_4	PF13599.6	gi|288559348|ref|YP_003422834.1|	-	0.021	15.0	5.8	1.4	9.1	0.1	4.0	3	1	0	3	3	3	0	Pentapeptide	repeats	(9	copies)
Big_1	PF02369.16	gi|288559348|ref|YP_003422834.1|	-	0.023	14.7	5.8	0.025	14.6	3.1	2.5	2	0	0	2	2	2	0	Bacterial	Ig-like	domain	(group	1)
IalB	PF06776.12	gi|288559348|ref|YP_003422834.1|	-	0.047	13.7	0.3	0.12	12.4	0.3	1.7	2	0	0	2	2	2	0	Invasion	associated	locus	B	(IalB)	protein
DUF3868	PF12984.7	gi|288559348|ref|YP_003422834.1|	-	0.057	13.2	0.5	1.2	8.9	0.1	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function,	B.	Theta	Gene	description	(DUF3868)
DUF3536	PF12055.8	gi|288559348|ref|YP_003422834.1|	-	0.82	8.9	4.7	6.5	6.0	0.1	2.9	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF3536)
Ndc80_HEC	PF03801.13	gi|288559348|ref|YP_003422834.1|	-	0.88	9.2	7.9	8	6.1	1.8	3.3	1	1	1	2	2	2	0	HEC/Ndc80p	family
DUF4618	PF15397.6	gi|288559349|ref|YP_003422835.1|	-	0.055	12.9	3.3	0.073	12.5	0.0	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4618)
Remorin_C	PF03763.13	gi|288559349|ref|YP_003422835.1|	-	0.091	12.6	11.7	0.49	10.3	4.4	2.2	2	0	0	2	2	2	0	Remorin,	C-terminal	region
DUF3150	PF11348.8	gi|288559349|ref|YP_003422835.1|	-	1.9	7.6	6.4	0.91	8.7	2.4	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3150)
Kunitz_BPTI	PF00014.23	gi|288559350|ref|YP_003422836.1|	-	0.026	14.7	0.2	0.049	13.9	0.2	1.5	1	0	0	1	1	1	0	Kunitz/Bovine	pancreatic	trypsin	inhibitor	domain
Sigma_reg_N	PF13800.6	gi|288559350|ref|YP_003422836.1|	-	0.041	14.2	0.0	0.045	14.0	0.0	1.1	1	0	0	1	1	1	0	Sigma	factor	regulator	N-terminal
DUF1282	PF06930.12	gi|288559351|ref|YP_003422837.1|	-	0.036	13.8	3.1	0.039	13.7	3.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1282)
Yip1	PF04893.17	gi|288559351|ref|YP_003422837.1|	-	0.038	13.7	3.4	0.04	13.6	3.4	1.1	1	0	0	1	1	1	0	Yip1	domain
Acyl_transf_3	PF01757.22	gi|288559351|ref|YP_003422837.1|	-	0.043	12.9	5.6	0.044	12.8	5.6	1.0	1	0	0	1	1	1	0	Acyltransferase	family
Fumarate_red_C	PF02300.17	gi|288559351|ref|YP_003422837.1|	-	0.12	12.5	1.9	0.12	12.4	1.9	1.1	1	0	0	1	1	1	0	Fumarate	reductase	subunit	C
OST3_OST6	PF04756.13	gi|288559351|ref|YP_003422837.1|	-	0.76	9.1	4.2	0.82	9.0	4.2	1.0	1	0	0	1	1	1	0	OST3	/	OST6	family,	transporter	family
FeoB_associated	PF12669.7	gi|288559351|ref|YP_003422837.1|	-	1.1	9.7	6.9	0.17	12.3	1.5	1.9	2	0	0	2	2	2	0	FeoB-associated	Cys-rich	membrane	protein
ABC2_membrane_3	PF12698.7	gi|288559351|ref|YP_003422837.1|	-	1.8	7.6	8.4	1.9	7.5	8.4	1.0	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
TM1586_NiRdase	PF14512.6	gi|288559352|ref|YP_003422838.1|	-	1.5e-43	148.8	0.0	1.9e-43	148.5	0.0	1.1	1	0	0	1	1	1	1	Putative	TM	nitroreductase
Nitroreductase	PF00881.24	gi|288559352|ref|YP_003422838.1|	-	1.1e-09	38.5	0.4	0.11	12.6	0.0	3.5	2	2	1	3	3	3	3	Nitroreductase	family
ICMT	PF04140.14	gi|288559353|ref|YP_003422839.1|	-	3.6e-10	40.1	4.1	9.6e-10	38.8	2.4	2.3	2	0	0	2	2	2	1	Isoprenylcysteine	carboxyl	methyltransferase	(ICMT)	family
PEMT	PF04191.13	gi|288559353|ref|YP_003422839.1|	-	4.9e-09	36.5	2.3	4.9e-09	36.5	2.3	2.3	2	1	0	3	3	3	1	Phospholipid	methyltransferase
ERG4_ERG24	PF01222.17	gi|288559353|ref|YP_003422839.1|	-	9.1e-08	31.3	0.1	9.1e-08	31.3	0.1	1.8	1	1	1	2	2	2	1	Ergosterol	biosynthesis	ERG4/ERG24	family
NnrU	PF07298.11	gi|288559353|ref|YP_003422839.1|	-	8.5e-05	22.2	0.9	0.00018	21.1	0.3	1.8	1	1	0	1	1	1	1	NnrU	protein
DUF3784	PF12650.7	gi|288559353|ref|YP_003422839.1|	-	0.00031	20.9	18.7	0.024	14.8	1.5	3.1	3	0	0	3	3	3	2	Domain	of	unknown	function	(DUF3784)
DUF1295	PF06966.12	gi|288559353|ref|YP_003422839.1|	-	0.0022	17.6	1.8	0.0034	17.0	1.6	1.6	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1295)
AgrB	PF04647.15	gi|288559353|ref|YP_003422839.1|	-	0.0049	16.2	18.9	0.025	13.9	13.3	2.4	2	1	1	3	3	3	1	Accessory	gene	regulator	B
DUF4131	PF13567.6	gi|288559353|ref|YP_003422839.1|	-	0.087	12.5	9.1	0.74	9.4	2.0	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4131)
EpsG	PF14897.6	gi|288559353|ref|YP_003422839.1|	-	0.16	11.3	23.0	0.31	10.3	14.3	2.1	2	0	0	2	2	2	0	EpsG	family
Phage_holin_3_6	PF07332.11	gi|288559353|ref|YP_003422839.1|	-	0.53	10.3	11.7	0.11	12.5	1.6	2.7	3	0	0	3	3	3	0	Putative	Actinobacterial	Holin-X,	holin	superfamily	III
DHHC	PF01529.20	gi|288559353|ref|YP_003422839.1|	-	2.1	8.4	11.3	2.3	8.3	0.9	2.6	1	1	1	2	2	2	0	DHHC	palmitoyltransferase
DUF2157	PF09925.9	gi|288559353|ref|YP_003422839.1|	-	2.5	7.9	10.0	0.3	10.9	1.7	1.9	1	1	1	2	2	2	0	Predicted	membrane	protein	(DUF2157)
Saf_2TM	PF18303.1	gi|288559353|ref|YP_003422839.1|	-	3.1	7.4	8.6	0.81	9.3	0.1	3.1	3	1	1	4	4	4	0	SAVED-fused	2TM	effector	domain
TMEM208_SND2	PF05620.11	gi|288559353|ref|YP_003422839.1|	-	3.5	7.4	15.0	0.94	9.2	6.3	2.1	1	1	1	2	2	2	0	SRP-independent	targeting	protein	2/TMEM208
FA_desaturase	PF00487.24	gi|288559353|ref|YP_003422839.1|	-	4.1	7.1	10.2	0.6	9.9	5.6	1.9	1	1	2	3	3	3	0	Fatty	acid	desaturase
DUF5373	PF17343.2	gi|288559353|ref|YP_003422839.1|	-	8.7	6.1	18.0	4.4	7.1	0.7	3.6	3	1	1	4	4	4	0	Family	of	unknown	function	(DUF5373)
Dus	PF01207.17	gi|288559354|ref|YP_003422840.1|	-	6.7e-94	314.5	0.1	8.2e-94	314.2	0.1	1.0	1	0	0	1	1	1	1	Dihydrouridine	synthase	(Dus)
His_biosynth	PF00977.21	gi|288559354|ref|YP_003422840.1|	-	4.6e-08	32.8	0.2	7.2e-08	32.2	0.2	1.3	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
SOR_SNZ	PF01680.17	gi|288559354|ref|YP_003422840.1|	-	1.4e-06	28.2	1.4	0.0023	17.8	0.2	2.4	1	1	1	2	2	2	2	SOR/SNZ	family
PdxJ	PF03740.13	gi|288559354|ref|YP_003422840.1|	-	0.00017	20.8	0.0	0.00029	20.0	0.0	1.3	1	0	0	1	1	1	1	Pyridoxal	phosphate	biosynthesis	protein	PdxJ
PEP_mutase	PF13714.6	gi|288559354|ref|YP_003422840.1|	-	0.00066	19.2	0.1	0.0015	18.0	0.1	1.5	1	1	0	1	1	1	1	Phosphoenolpyruvate	phosphomutase
DHO_dh	PF01180.21	gi|288559354|ref|YP_003422840.1|	-	0.001	18.4	2.4	0.043	13.0	1.1	2.5	2	1	0	2	2	2	1	Dihydroorotate	dehydrogenase
Oxidored_FMN	PF00724.20	gi|288559354|ref|YP_003422840.1|	-	0.0075	15.6	0.0	0.06	12.6	0.0	2.1	2	0	0	2	2	2	1	NADH:flavin	oxidoreductase	/	NADH	oxidase	family
IGPS	PF00218.21	gi|288559354|ref|YP_003422840.1|	-	0.11	11.6	0.0	0.19	10.9	0.0	1.4	1	0	0	1	1	1	0	Indole-3-glycerol	phosphate	synthase
MR_MLE_C	PF13378.6	gi|288559354|ref|YP_003422840.1|	-	0.14	11.7	0.0	0.19	11.2	0.0	1.3	1	0	0	1	1	1	0	Enolase	C-terminal	domain-like
DUF1743	PF08489.11	gi|288559355|ref|YP_003422841.1|	-	5.1e-09	36.2	0.1	3.5e-06	27.1	0.1	3.3	2	1	0	2	2	2	1	Domain	of	unknown	function	(DUF1743)
YycC	PF14174.6	gi|288559355|ref|YP_003422841.1|	-	0.13	12.1	0.2	0.45	10.3	0.1	1.9	2	0	0	2	2	2	0	YycC-like	protein
DMRL_synthase	PF00885.19	gi|288559356|ref|YP_003422842.1|	-	1.2e-30	106.1	0.1	1.4e-30	106.0	0.1	1.0	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
HSP70	PF00012.20	gi|288559356|ref|YP_003422842.1|	-	0.039	12.1	0.1	0.044	12.0	0.1	1.0	1	0	0	1	1	1	0	Hsp70	protein
Glycos_transf_1	PF00534.20	gi|288559357|ref|YP_003422843.1|	-	7.3e-29	100.5	0.0	1.3e-28	99.7	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|288559357|ref|YP_003422843.1|	-	8.5e-26	91.0	0.0	1.4e-25	90.3	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.6	gi|288559357|ref|YP_003422843.1|	-	3.4e-12	46.6	0.0	2.8e-11	43.6	0.0	2.2	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|288559357|ref|YP_003422843.1|	-	6.2e-11	42.6	0.0	1.8e-10	41.1	0.0	1.8	1	1	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_4_4	PF13579.6	gi|288559357|ref|YP_003422843.1|	-	0.00065	20.2	0.0	0.002	18.6	0.0	1.8	1	1	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_4_2	PF13477.6	gi|288559357|ref|YP_003422843.1|	-	0.00082	19.4	0.0	0.0039	17.2	0.0	2.1	1	1	1	2	2	2	1	Glycosyl	transferase	4-like
PS_pyruv_trans	PF04230.13	gi|288559358|ref|YP_003422844.1|	-	1.9e-13	51.0	1.8	4.1e-12	46.6	0.0	2.7	3	0	0	3	3	3	2	Polysaccharide	pyruvyl	transferase
Glycos_transf_2	PF00535.26	gi|288559359|ref|YP_003422845.1|	-	8.5e-34	116.8	0.4	1.4e-33	116.1	0.4	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.9	gi|288559359|ref|YP_003422845.1|	-	1.1e-13	51.3	0.4	1.1e-13	51.3	0.4	1.6	2	0	0	2	2	2	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_3	PF13641.6	gi|288559359|ref|YP_003422845.1|	-	3.8e-08	33.5	0.0	6.3e-08	32.8	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|288559359|ref|YP_003422845.1|	-	0.015	15.8	0.0	0.041	14.4	0.0	1.9	1	1	0	1	1	1	0	Glycosyl	transferase	family	2
ATP-synt_F	PF01990.17	gi|288559359|ref|YP_003422845.1|	-	0.041	14.2	0.1	0.089	13.1	0.1	1.5	1	0	0	1	1	1	0	ATP	synthase	(F/14-kDa)	subunit
Aconitase_C	PF00694.19	gi|288559359|ref|YP_003422845.1|	-	0.069	13.5	0.0	0.35	11.2	0.0	2.1	2	0	0	2	2	2	0	Aconitase	C-terminal	domain
Cnn_1N	PF07989.11	gi|288559360|ref|YP_003422846.1|	-	1.9	8.7	13.5	0.31	11.2	8.7	2.3	2	0	0	2	2	2	0	Centrosomin	N-terminal	motif	1
bZIP_1	PF00170.21	gi|288559360|ref|YP_003422846.1|	-	2.1	8.5	18.7	0.071	13.2	10.5	2.8	3	0	0	3	3	3	0	bZIP	transcription	factor
DivIC	PF04977.15	gi|288559360|ref|YP_003422846.1|	-	5.4	6.9	14.0	0.64	9.8	5.7	3.2	2	1	1	3	3	3	0	Septum	formation	initiator
Iso_dh	PF00180.20	gi|288559361|ref|YP_003422847.1|	-	2.9e-102	342.4	0.3	3.6e-102	342.1	0.3	1.0	1	0	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
DUF1447	PF07288.11	gi|288559361|ref|YP_003422847.1|	-	0.13	12.4	0.4	0.27	11.3	0.4	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1447)
Aconitase_C	PF00694.19	gi|288559362|ref|YP_003422848.1|	-	6.8e-19	68.5	0.0	9.5e-19	68.0	0.0	1.2	1	0	0	1	1	1	1	Aconitase	C-terminal	domain
Aconitase_2_N	PF06434.13	gi|288559362|ref|YP_003422848.1|	-	0.035	13.7	0.1	0.096	12.3	0.1	1.9	1	1	0	1	1	1	0	Aconitate	hydratase	2	N-terminus
Aconitase	PF00330.20	gi|288559363|ref|YP_003422849.1|	-	1.5e-98	330.8	2.3	4.7e-96	322.6	2.3	2.3	1	1	0	1	1	1	1	Aconitase	family	(aconitate	hydratase)
DUF521	PF04412.13	gi|288559363|ref|YP_003422849.1|	-	0.017	13.9	0.0	0.026	13.3	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF521)
UDPG_MGDP_dh_N	PF03721.14	gi|288559364|ref|YP_003422850.1|	-	3.3e-56	189.8	0.6	6.9e-56	188.8	0.6	1.5	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
UDPG_MGDP_dh_C	PF03720.15	gi|288559364|ref|YP_003422850.1|	-	2.5e-26	92.2	0.2	8.4e-26	90.4	0.2	2.0	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
UDPG_MGDP_dh	PF00984.19	gi|288559364|ref|YP_003422850.1|	-	3.6e-25	88.0	1.2	7e-25	87.1	0.1	2.1	3	0	0	3	3	2	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	central	domain
3HCDH_N	PF02737.18	gi|288559364|ref|YP_003422850.1|	-	2.3e-06	27.6	0.0	9.5e-06	25.6	0.0	2.0	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
ApbA	PF02558.16	gi|288559364|ref|YP_003422850.1|	-	1.2e-05	25.0	0.0	0.00032	20.4	0.0	2.7	2	1	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
Pyr_redox	PF00070.27	gi|288559364|ref|YP_003422850.1|	-	1.6e-05	25.4	0.5	0.0028	18.2	0.1	3.1	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_2	PF03446.15	gi|288559364|ref|YP_003422850.1|	-	5e-05	23.5	0.0	0.00027	21.2	0.0	2.2	2	1	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Pyr_redox_2	PF07992.14	gi|288559364|ref|YP_003422850.1|	-	0.0007	18.9	0.1	0.0015	17.9	0.1	1.5	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
OrfB_IS605	PF01385.19	gi|288559364|ref|YP_003422850.1|	-	0.00096	19.4	0.0	0.0017	18.6	0.0	1.4	1	0	0	1	1	1	1	Probable	transposase
2-Hacid_dh_C	PF02826.19	gi|288559364|ref|YP_003422850.1|	-	0.0026	17.1	0.1	0.029	13.7	0.0	2.5	2	1	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_Gly3P_dh_N	PF01210.23	gi|288559364|ref|YP_003422850.1|	-	0.0075	16.3	0.0	0.068	13.1	0.0	2.6	3	1	0	3	3	3	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
TrkA_N	PF02254.18	gi|288559364|ref|YP_003422850.1|	-	0.024	14.9	0.2	0.14	12.4	0.1	2.4	2	1	0	2	2	2	0	TrkA-N	domain
Methyltransf_31	PF13847.6	gi|288559364|ref|YP_003422850.1|	-	0.1	12.4	0.2	0.39	10.5	0.0	2.3	2	1	0	2	2	2	0	Methyltransferase	domain
adh_short	PF00106.25	gi|288559364|ref|YP_003422850.1|	-	0.12	11.8	0.4	0.71	9.3	0.0	2.1	2	0	0	2	2	2	0	short	chain	dehydrogenase
adh_short_C2	PF13561.6	gi|288559364|ref|YP_003422850.1|	-	0.13	11.8	0.1	0.61	9.6	0.0	2.2	3	0	0	3	3	3	0	Enoyl-(Acyl	carrier	protein)	reductase
Methyltransf_23	PF13489.6	gi|288559364|ref|YP_003422850.1|	-	0.15	11.9	0.0	0.33	10.8	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
RmlD_sub_bind	PF04321.17	gi|288559365|ref|YP_003422851.1|	-	8.5e-104	346.7	0.0	9.5e-104	346.5	0.0	1.0	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Epimerase	PF01370.21	gi|288559365|ref|YP_003422851.1|	-	1.4e-25	90.2	0.0	2e-25	89.7	0.0	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
GDP_Man_Dehyd	PF16363.5	gi|288559365|ref|YP_003422851.1|	-	2.4e-13	50.2	0.1	1.5e-12	47.6	0.0	2.0	1	1	1	2	2	2	1	GDP-mannose	4,6	dehydratase
Polysacc_synt_2	PF02719.15	gi|288559365|ref|YP_003422851.1|	-	9.1e-10	38.1	0.3	5.5e-08	32.3	0.1	2.9	1	1	1	2	2	2	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.12	gi|288559365|ref|YP_003422851.1|	-	8.8e-09	34.9	0.0	8.1e-08	31.7	0.0	2.1	2	1	0	2	2	2	1	Male	sterility	protein
3Beta_HSD	PF01073.19	gi|288559365|ref|YP_003422851.1|	-	1e-05	24.7	0.0	2.3e-05	23.5	0.0	1.6	1	1	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
NTP_transferase	PF00483.23	gi|288559366|ref|YP_003422852.1|	-	1.9e-66	224.2	0.0	2.3e-66	223.9	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.7	gi|288559366|ref|YP_003422852.1|	-	9.7e-09	35.8	0.0	1.2e-08	35.4	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.19	gi|288559366|ref|YP_003422852.1|	-	0.0077	16.0	0.0	0.012	15.4	0.0	1.3	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
CTP_transf_3	PF02348.19	gi|288559366|ref|YP_003422852.1|	-	0.12	12.3	0.0	0.2	11.6	0.0	1.4	1	0	0	1	1	1	0	Cytidylyltransferase
dTDP_sugar_isom	PF00908.17	gi|288559367|ref|YP_003422853.1|	-	1.8e-75	252.3	0.0	2e-75	252.1	0.0	1.0	1	0	0	1	1	1	1	dTDP-4-dehydrorhamnose	3,5-epimerase
GDP_Man_Dehyd	PF16363.5	gi|288559368|ref|YP_003422854.1|	-	4.4e-95	318.9	0.0	5.1e-95	318.7	0.0	1.0	1	0	0	1	1	1	1	GDP-mannose	4,6	dehydratase
Epimerase	PF01370.21	gi|288559368|ref|YP_003422854.1|	-	5.3e-68	229.1	0.0	6.8e-68	228.7	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
3Beta_HSD	PF01073.19	gi|288559368|ref|YP_003422854.1|	-	2.9e-17	62.6	0.0	4.1e-17	62.1	0.0	1.2	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
Polysacc_synt_2	PF02719.15	gi|288559368|ref|YP_003422854.1|	-	1.2e-14	54.2	0.0	1.8e-14	53.6	0.0	1.3	1	0	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.12	gi|288559368|ref|YP_003422854.1|	-	1.9e-13	50.2	0.0	1.6e-09	37.4	0.0	2.5	2	1	0	2	2	2	2	Male	sterility	protein
RmlD_sub_bind	PF04321.17	gi|288559368|ref|YP_003422854.1|	-	3.1e-11	42.9	0.0	4.3e-11	42.5	0.0	1.2	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
NAD_binding_10	PF13460.6	gi|288559368|ref|YP_003422854.1|	-	2.6e-06	27.5	0.0	4e-06	26.9	0.0	1.2	1	0	0	1	1	1	1	NAD(P)H-binding
NifZ	PF04319.13	gi|288559368|ref|YP_003422854.1|	-	0.05	13.4	0.0	0.13	12.1	0.0	1.7	1	0	0	1	1	1	0	NifZ	domain
adh_short	PF00106.25	gi|288559368|ref|YP_003422854.1|	-	0.12	11.8	0.0	3.1	7.2	0.0	2.2	2	0	0	2	2	2	0	short	chain	dehydrogenase
NmrA	PF05368.13	gi|288559368|ref|YP_003422854.1|	-	0.12	11.9	0.0	0.19	11.3	0.0	1.3	1	0	0	1	1	1	0	NmrA-like	family
Glycos_transf_2	PF00535.26	gi|288559369|ref|YP_003422855.1|	-	3.1e-22	79.2	0.2	7.7e-22	77.9	0.2	1.7	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|288559369|ref|YP_003422855.1|	-	3.5e-09	36.9	0.0	6.1e-09	36.1	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.6	gi|288559369|ref|YP_003422855.1|	-	0.00019	21.4	0.0	0.00029	20.8	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_tranf_2_5	PF13712.6	gi|288559369|ref|YP_003422855.1|	-	0.043	13.5	0.9	0.28	10.8	0.5	2.1	2	0	0	2	2	2	0	Glycosyltransferase	like	family
Glycos_transf_2	PF00535.26	gi|288559370|ref|YP_003422856.1|	-	1.9e-24	86.4	2.1	2.3e-24	86.1	0.9	1.9	2	1	0	2	2	2	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|288559370|ref|YP_003422856.1|	-	5.1e-22	78.9	0.0	7.2e-22	78.4	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.6	gi|288559370|ref|YP_003422856.1|	-	4.1e-07	30.1	0.1	1e-06	28.8	0.1	1.8	1	1	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_transf_21	PF13506.6	gi|288559370|ref|YP_003422856.1|	-	5.4e-06	26.0	0.1	0.024	14.1	0.0	2.2	2	0	0	2	2	2	2	Glycosyl	transferase	family	21
Glyco_tranf_2_2	PF10111.9	gi|288559370|ref|YP_003422856.1|	-	0.00019	21.0	1.7	0.00058	19.4	0.5	1.9	2	0	0	2	2	2	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|288559370|ref|YP_003422856.1|	-	0.045	14.3	0.0	0.11	13.0	0.0	1.7	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
Bac_transf	PF02397.16	gi|288559371|ref|YP_003422857.1|	-	1.9e-69	233.0	0.4	1.9e-69	233.0	0.4	1.9	2	0	0	2	2	2	1	Bacterial	sugar	transferase
CoA_binding_3	PF13727.6	gi|288559371|ref|YP_003422857.1|	-	4.7e-18	65.8	2.9	5.6e-18	65.6	0.0	2.1	1	1	1	2	2	2	1	CoA-binding	domain
tRNA_anti-codon	PF01336.25	gi|288559372|ref|YP_003422858.1|	-	2.7e-34	117.0	12.8	1.4e-08	34.6	0.1	6.7	7	0	0	7	7	7	6	OB-fold	nucleic	acid	binding	domain
CDC24_OB3	PF17244.2	gi|288559372|ref|YP_003422858.1|	-	1.1e-23	84.1	0.0	3e-06	27.1	0.0	4.3	4	0	0	4	4	4	4	Cell	division	control	protein	24,	OB	domain	3
REPA_OB_2	PF16900.5	gi|288559372|ref|YP_003422858.1|	-	4.5e-18	65.0	10.0	8.4e-06	25.6	1.0	5.5	5	0	0	5	5	5	4	Replication	protein	A	OB	domain
Rep_fac-A_C	PF08646.10	gi|288559372|ref|YP_003422858.1|	-	2.7e-14	53.1	0.0	1.3e-09	37.9	0.0	4.8	5	0	0	5	5	5	1	Replication	factor-A	C	terminal	domain
POT1PC	PF16686.5	gi|288559372|ref|YP_003422858.1|	-	4.2e-06	26.7	0.5	0.65	9.9	0.0	4.4	3	1	2	5	5	5	2	ssDNA-binding	domain	of	telomere	protection	protein
SH3_2	PF07653.17	gi|288559372|ref|YP_003422858.1|	-	0.00034	20.2	4.4	2.4	7.9	0.1	5.1	5	1	0	5	5	5	2	Variant	SH3	domain
PBP3	PF18056.1	gi|288559372|ref|YP_003422858.1|	-	0.012	15.8	0.0	0.48	10.6	0.0	2.7	2	0	0	2	2	2	0	Penicillin	Binding	Protein	3	Domain
DUF5088	PF17008.5	gi|288559372|ref|YP_003422858.1|	-	0.033	13.9	1.0	0.34	10.6	0.0	3.0	3	1	1	4	4	4	0	Domain	of	unknown	function	(DUF5088)
UPF0547	PF10571.9	gi|288559372|ref|YP_003422858.1|	-	0.059	13.5	1.1	0.15	12.2	1.1	1.6	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
DUF1272	PF06906.11	gi|288559372|ref|YP_003422858.1|	-	0.21	11.7	1.2	0.43	10.7	1.2	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1272)
zf-ribbon_3	PF13248.6	gi|288559372|ref|YP_003422858.1|	-	0.26	10.7	2.1	5.8	6.5	0.3	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
RNA_POL_M_15KD	PF02150.16	gi|288559372|ref|YP_003422858.1|	-	0.33	10.9	2.7	0.75	9.7	2.7	1.5	1	0	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
zinc_ribbon_2	PF13240.6	gi|288559372|ref|YP_003422858.1|	-	2.3	8.1	3.9	5.8	6.8	3.9	1.7	1	1	0	1	1	1	0	zinc-ribbon	domain
Rad51	PF08423.11	gi|288559373|ref|YP_003422859.1|	-	5.9e-91	304.2	0.1	7.1e-91	304.0	0.1	1.1	1	0	0	1	1	1	1	Rad51
RecA	PF00154.21	gi|288559373|ref|YP_003422859.1|	-	6.7e-15	55.3	0.2	9.4e-15	54.8	0.2	1.2	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
ATPase	PF06745.13	gi|288559373|ref|YP_003422859.1|	-	4.7e-09	36.0	0.1	8.5e-09	35.1	0.1	1.4	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.6	gi|288559373|ref|YP_003422859.1|	-	9.1e-09	35.2	0.0	1.8e-08	34.2	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
HHH_2	PF12826.7	gi|288559373|ref|YP_003422859.1|	-	2.5e-07	30.7	0.3	8.2e-07	29.0	0.3	2.0	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_5	PF14520.6	gi|288559373|ref|YP_003422859.1|	-	8.8e-07	29.4	1.9	2e-06	28.3	0.9	2.1	2	0	0	2	2	2	1	Helix-hairpin-helix	domain
Cdd1	PF11731.8	gi|288559373|ref|YP_003422859.1|	-	9.1e-05	22.6	0.0	0.0002	21.6	0.0	1.6	1	0	0	1	1	1	1	Pathogenicity	locus
AAA_22	PF13401.6	gi|288559373|ref|YP_003422859.1|	-	0.0016	18.7	0.1	0.003	17.8	0.1	1.4	1	0	0	1	1	1	1	AAA	domain
TfoX_C	PF04994.13	gi|288559373|ref|YP_003422859.1|	-	0.0049	16.9	0.2	0.068	13.3	0.0	2.3	2	0	0	2	2	2	1	TfoX	C-terminal	domain
HHH	PF00633.23	gi|288559373|ref|YP_003422859.1|	-	0.0095	15.8	1.0	0.14	12.0	0.0	2.9	2	1	0	2	2	2	1	Helix-hairpin-helix	motif
AAA_18	PF13238.6	gi|288559373|ref|YP_003422859.1|	-	0.056	14.0	0.0	0.17	12.4	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
HHH_8	PF14716.6	gi|288559373|ref|YP_003422859.1|	-	0.058	13.8	3.1	0.81	10.1	0.0	3.6	4	0	0	4	4	4	0	Helix-hairpin-helix	domain
IMS_HHH	PF11798.8	gi|288559373|ref|YP_003422859.1|	-	0.099	13.0	0.0	0.33	11.4	0.0	2.0	1	0	0	1	1	1	0	IMS	family	HHH	motif
Mem_trans	PF03547.18	gi|288559374|ref|YP_003422860.1|	-	3.3e-28	98.2	32.1	2.5e-15	55.8	11.8	2.0	1	1	1	2	2	2	2	Membrane	transport	protein
FeoB_C	PF07664.12	gi|288559374|ref|YP_003422860.1|	-	0.23	11.2	0.2	0.23	11.2	0.2	3.2	3	0	0	3	3	3	0	Ferrous	iron	transport	protein	B	C	terminus
Pyr_redox_2	PF07992.14	gi|288559375|ref|YP_003422861.1|	-	6.4e-22	78.1	0.0	2.4e-21	76.3	0.0	1.9	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Fer4	PF00037.27	gi|288559375|ref|YP_003422861.1|	-	5e-19	67.3	40.8	3.1e-05	23.6	4.4	5.0	4	0	0	4	4	4	4	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|288559375|ref|YP_003422861.1|	-	1.7e-13	50.9	32.4	2.3e-06	28.1	9.8	4.7	4	1	0	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|288559375|ref|YP_003422861.1|	-	9.1e-12	44.9	34.0	8.2e-06	25.8	10.5	4.8	4	2	1	5	5	4	4	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|288559375|ref|YP_003422861.1|	-	2e-11	44.6	29.3	0.0014	19.5	0.4	5.4	6	0	0	6	6	5	4	4Fe-4S	double	cluster	binding	domain
Fer4_9	PF13187.6	gi|288559375|ref|YP_003422861.1|	-	1.7e-10	40.9	25.6	2.3e-06	27.7	9.0	3.9	4	1	0	4	4	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|288559375|ref|YP_003422861.1|	-	1.2e-07	32.1	30.1	0.0017	18.8	1.1	5.5	5	0	0	5	5	5	3	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|288559375|ref|YP_003422861.1|	-	3e-07	30.1	49.4	0.00062	19.7	2.6	5.5	6	0	0	6	6	4	4	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|288559375|ref|YP_003422861.1|	-	5.1e-07	29.7	48.3	0.0023	18.0	6.6	5.4	5	2	1	6	6	5	4	4Fe-4S	dicluster	domain
Pyr_redox	PF00070.27	gi|288559375|ref|YP_003422861.1|	-	7e-07	29.7	0.5	0.00012	22.5	0.5	3.4	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Fer4_6	PF12837.7	gi|288559375|ref|YP_003422861.1|	-	1.2e-06	28.3	56.3	0.0005	20.0	2.2	6.1	7	0	0	7	7	6	3	4Fe-4S	binding	domain
FAD_oxidored	PF12831.7	gi|288559375|ref|YP_003422861.1|	-	3.6e-06	26.6	0.0	6.1e-06	25.8	0.0	1.3	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Fer4_8	PF13183.6	gi|288559375|ref|YP_003422861.1|	-	3.9e-06	27.2	30.0	0.0023	18.4	1.4	5.0	3	2	2	5	5	5	3	4Fe-4S	dicluster	domain
AlaDh_PNT_C	PF01262.21	gi|288559375|ref|YP_003422861.1|	-	4.3e-06	26.2	0.1	1.2e-05	24.7	0.0	1.8	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
Fer4_4	PF12800.7	gi|288559375|ref|YP_003422861.1|	-	7.1e-06	26.1	33.0	0.037	14.5	1.8	5.2	4	0	0	4	4	4	3	4Fe-4S	binding	domain
GIDA	PF01134.22	gi|288559375|ref|YP_003422861.1|	-	5.3e-05	22.5	0.1	0.00015	20.9	0.0	1.8	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
DAO	PF01266.24	gi|288559375|ref|YP_003422861.1|	-	0.00028	20.6	0.1	0.018	14.6	0.1	2.3	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.24	gi|288559375|ref|YP_003422861.1|	-	0.0012	18.0	0.0	0.0019	17.4	0.0	1.3	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox_3	PF13738.6	gi|288559375|ref|YP_003422861.1|	-	0.0015	17.9	0.1	0.0061	15.9	0.1	1.9	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.6	gi|288559375|ref|YP_003422861.1|	-	0.0029	17.8	0.0	0.0063	16.7	0.0	1.5	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Fer4_13	PF13370.6	gi|288559375|ref|YP_003422861.1|	-	0.0045	17.5	28.1	0.71	10.5	1.7	4.8	4	0	0	4	4	4	3	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_22	PF17179.4	gi|288559375|ref|YP_003422861.1|	-	0.02	15.7	0.2	0.02	15.7	0.2	4.8	5	0	0	5	5	4	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|288559375|ref|YP_003422861.1|	-	0.045	14.7	4.7	0.045	14.7	4.7	6.6	7	0	0	7	7	5	0	4Fe-4S	binding	domain
HI0933_like	PF03486.14	gi|288559375|ref|YP_003422861.1|	-	0.048	12.4	0.3	0.099	11.3	0.3	1.5	1	0	0	1	1	1	0	HI0933-like	protein
FAD_binding_3	PF01494.19	gi|288559375|ref|YP_003422861.1|	-	0.056	12.7	0.1	0.11	11.7	0.1	1.4	1	0	0	1	1	1	0	FAD	binding	domain
Fer4_15	PF13459.6	gi|288559375|ref|YP_003422861.1|	-	0.063	14.0	26.9	0.36	11.6	0.8	4.7	3	1	1	4	4	4	0	4Fe-4S	single	cluster	domain
AGT	PF11440.8	gi|288559376|ref|YP_003422862.1|	-	0.012	14.7	0.1	0.017	14.2	0.1	1.2	1	0	0	1	1	1	0	DNA	alpha-glucosyltransferase
G6PD_C	PF02781.16	gi|288559376|ref|YP_003422862.1|	-	0.016	14.4	0.1	0.13	11.5	0.0	2.0	1	1	1	2	2	2	0	Glucose-6-phosphate	dehydrogenase,	C-terminal	domain
DDE_Tnp_1_6	PF13751.6	gi|288559377|ref|YP_003422863.1|	-	1.2e-19	70.8	1.1	5.1e-19	68.7	0.5	2.1	2	0	0	2	2	2	1	Transposase	DDE	domain
DDE_Tnp_1	PF01609.21	gi|288559377|ref|YP_003422863.1|	-	1.2e-11	44.6	0.8	7.4e-11	42.1	0.8	2.0	1	1	0	1	1	1	1	Transposase	DDE	domain
DUF772	PF05598.11	gi|288559377|ref|YP_003422863.1|	-	4.3e-06	26.7	0.0	1.1e-05	25.3	0.0	1.7	1	0	0	1	1	1	1	Transposase	domain	(DUF772)
SF3b1	PF08920.10	gi|288559378|ref|YP_003422864.1|	-	0.063	13.8	0.0	0.086	13.3	0.0	1.1	1	0	0	1	1	1	0	Splicing	factor	3B	subunit	1
SHMT	PF00464.19	gi|288559380|ref|YP_003422866.1|	-	3.5e-75	253.1	0.9	5e-75	252.6	0.9	1.2	1	0	0	1	1	1	1	Serine	hydroxymethyltransferase
Aminotran_1_2	PF00155.21	gi|288559380|ref|YP_003422866.1|	-	5e-08	32.5	0.0	9.2e-08	31.6	0.0	1.5	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Beta_elim_lyase	PF01212.21	gi|288559380|ref|YP_003422866.1|	-	7.1e-05	22.2	0.5	0.00022	20.6	0.4	1.9	1	1	1	2	2	2	1	Beta-eliminating	lyase
Cys_Met_Meta_PP	PF01053.20	gi|288559380|ref|YP_003422866.1|	-	0.01	14.4	0.0	0.022	13.3	0.0	1.4	1	1	0	1	1	1	0	Cys/Met	metabolism	PLP-dependent	enzyme
SelA	PF03841.13	gi|288559380|ref|YP_003422866.1|	-	0.012	14.7	0.0	0.019	14.0	0.0	1.3	1	0	0	1	1	1	0	L-seryl-tRNA	selenium	transferase
Ribosomal_L21e	PF01157.18	gi|288559380|ref|YP_003422866.1|	-	0.02	14.8	0.1	0.054	13.4	0.0	1.8	2	0	0	2	2	2	0	Ribosomal	protein	L21e
PRA-PH	PF01503.17	gi|288559380|ref|YP_003422866.1|	-	0.049	14.1	0.0	0.13	12.7	0.0	1.7	1	0	0	1	1	1	0	Phosphoribosyl-ATP	pyrophosphohydrolase
Flavoprotein	PF02441.19	gi|288559381|ref|YP_003422867.1|	-	9.4e-16	58.0	0.0	5.2e-15	55.5	0.0	1.9	2	0	0	2	2	2	1	Flavoprotein
Fer4_7	PF12838.7	gi|288559381|ref|YP_003422867.1|	-	1.1e-07	32.3	4.1	0.00027	21.5	0.4	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|288559381|ref|YP_003422867.1|	-	1e-06	28.3	18.2	2.9e-06	26.8	2.9	3.1	2	1	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|288559381|ref|YP_003422867.1|	-	4.2e-06	27.1	1.4	0.0026	18.2	0.1	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|288559381|ref|YP_003422867.1|	-	0.00011	22.7	2.7	0.066	13.8	0.3	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|288559381|ref|YP_003422867.1|	-	0.00028	20.8	13.8	0.0027	17.7	2.4	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|288559381|ref|YP_003422867.1|	-	0.00032	21.6	9.3	0.049	14.6	0.6	2.3	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_15	PF13459.6	gi|288559381|ref|YP_003422867.1|	-	0.0006	20.5	3.5	0.65	10.8	0.3	2.5	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_9	PF13187.6	gi|288559381|ref|YP_003422867.1|	-	0.0015	18.6	12.8	0.022	14.9	14.1	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|288559381|ref|YP_003422867.1|	-	0.0029	17.6	1.0	0.0029	17.6	1.0	2.4	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|288559381|ref|YP_003422867.1|	-	0.0044	17.4	2.3	0.0044	17.4	2.3	2.4	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|288559381|ref|YP_003422867.1|	-	0.0095	16.1	10.1	0.05	13.7	1.9	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|288559381|ref|YP_003422867.1|	-	0.015	15.4	13.6	0.025	14.7	2.0	1.9	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
RPAP1_N	PF08621.10	gi|288559381|ref|YP_003422867.1|	-	0.017	14.9	0.0	0.025	14.3	0.0	1.3	1	0	0	1	1	1	0	RPAP1-like,	N-terminal
Fer4_18	PF13746.6	gi|288559381|ref|YP_003422867.1|	-	0.024	14.8	5.6	0.038	14.2	5.6	1.4	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|288559381|ref|YP_003422867.1|	-	0.59	11.2	14.6	0.22	12.6	4.0	2.7	2	1	0	2	2	2	0	4Fe-4S	binding	domain
DUF192	PF02643.15	gi|288559382|ref|YP_003422868.1|	-	3.6e-14	52.7	0.0	4.5e-14	52.4	0.0	1.1	1	0	0	1	1	1	1	Uncharacterized	ACR,	COG1430
AdoMet_Synthase	PF01941.19	gi|288559383|ref|YP_003422869.1|	-	6e-172	571.9	3.9	6.8e-172	571.7	3.9	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	synthetase	(AdoMet	synthetase)
tRNA-synt_1	PF00133.22	gi|288559384|ref|YP_003422870.1|	-	1.5e-188	627.9	0.1	1.2e-185	618.2	0.1	2.3	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.13	gi|288559384|ref|YP_003422870.1|	-	2.2e-30	105.6	6.2	4.5e-30	104.6	0.2	3.0	3	0	0	3	3	3	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.11	gi|288559384|ref|YP_003422870.1|	-	4e-25	88.4	3.6	9.5e-12	44.4	0.2	4.0	3	1	0	3	3	3	3	tRNA	synthetases	class	I	(M)
tRNA-synt_1f	PF01921.18	gi|288559384|ref|YP_003422870.1|	-	5.3e-07	28.9	0.0	2.1e-05	23.6	0.0	2.7	2	1	0	2	2	2	1	tRNA	synthetases	class	I	(K)
tRNA-synt_1e	PF01406.19	gi|288559384|ref|YP_003422870.1|	-	7.3e-07	28.8	0.0	2.3e-06	27.2	0.0	1.8	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(C)	catalytic	domain
DUF768	PF05589.11	gi|288559384|ref|YP_003422870.1|	-	0.034	14.2	0.5	0.15	12.1	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF768)
AIRS_C	PF02769.22	gi|288559385|ref|YP_003422871.1|	-	2.3e-56	190.2	5.4	1.7e-32	112.7	0.2	2.3	2	0	0	2	2	2	2	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.24	gi|288559385|ref|YP_003422871.1|	-	4.6e-48	161.8	0.3	6e-23	81.3	0.1	2.6	2	0	0	2	2	2	2	AIR	synthase	related	protein,	N-terminal	domain
FGAR-AT_linker	PF18072.1	gi|288559385|ref|YP_003422871.1|	-	7.7e-09	36.0	0.2	2.3e-08	34.5	0.1	1.9	2	0	0	2	2	2	1	Formylglycinamide	ribonucleotide	amidotransferase	linker	domain
MoeA_N	PF03453.17	gi|288559386|ref|YP_003422872.1|	-	1.4e-41	141.9	0.2	9.6e-41	139.2	0.0	2.0	2	0	0	2	2	2	1	MoeA	N-terminal	region	(domain	I	and	II)
MoCF_biosynth	PF00994.24	gi|288559386|ref|YP_003422872.1|	-	1.1e-23	83.5	0.3	2.2e-23	82.5	0.3	1.5	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
MoeA_C	PF03454.15	gi|288559386|ref|YP_003422872.1|	-	4.1e-15	55.7	0.0	2.4e-14	53.2	0.0	2.4	3	0	0	3	3	3	1	MoeA	C-terminal	region	(domain	IV)
A_deamin	PF02137.18	gi|288559387|ref|YP_003422873.1|	-	0.11	11.9	1.4	0.13	11.7	1.4	1.1	1	0	0	1	1	1	0	Adenosine-deaminase	(editase)	domain
DA1-like	PF12315.8	gi|288559387|ref|YP_003422873.1|	-	0.12	11.8	0.5	0.19	11.1	0.5	1.3	1	0	0	1	1	1	0	Protein	DA1
GRP	PF07172.11	gi|288559387|ref|YP_003422873.1|	-	7.2	7.4	6.8	23	5.8	0.4	2.8	2	1	1	3	3	3	0	Glycine	rich	protein	family
Peptidase_M50	PF02163.22	gi|288559388|ref|YP_003422874.1|	-	5.9e-24	84.7	0.1	9.3e-23	80.8	0.1	2.1	1	1	0	1	1	1	1	Peptidase	family	M50
PDZ_2	PF13180.6	gi|288559388|ref|YP_003422874.1|	-	0.041	14.2	0.1	0.079	13.3	0.1	1.3	1	0	0	1	1	1	0	PDZ	domain
Flavodoxin_1	PF00258.25	gi|288559389|ref|YP_003422875.1|	-	7.8e-11	42.4	0.0	6.5e-10	39.4	0.0	2.2	2	0	0	2	2	2	1	Flavodoxin
Lactamase_B	PF00753.27	gi|288559389|ref|YP_003422875.1|	-	0.01	15.9	0.0	0.016	15.3	0.0	1.4	1	0	0	1	1	1	0	Metallo-beta-lactamase	superfamily
LPD1	PF18796.1	gi|288559389|ref|YP_003422875.1|	-	0.041	14.0	0.0	0.11	12.6	0.0	1.7	2	0	0	2	2	2	0	Large	polyvalent	protein-associated	domain	1
PGM_PMM_I	PF02878.16	gi|288559389|ref|YP_003422875.1|	-	0.079	12.7	0.0	0.17	11.6	0.0	1.4	1	0	0	1	1	1	0	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
V4R	PF02830.18	gi|288559390|ref|YP_003422876.1|	-	3.6e-17	62.1	1.5	5.7e-17	61.5	1.5	1.3	1	0	0	1	1	1	1	V4R	domain
HTH_5	PF01022.20	gi|288559390|ref|YP_003422876.1|	-	2.1e-12	46.7	0.0	3.4e-12	46.0	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.7	gi|288559390|ref|YP_003422876.1|	-	6.3e-05	23.0	0.0	0.00011	22.1	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.6	gi|288559390|ref|YP_003422876.1|	-	0.00041	19.8	0.0	0.00091	18.7	0.0	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_34	PF13601.6	gi|288559390|ref|YP_003422876.1|	-	0.0011	19.1	0.1	0.0022	18.2	0.1	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_IclR	PF09339.10	gi|288559390|ref|YP_003422876.1|	-	0.0016	18.2	0.0	0.0048	16.7	0.0	1.8	1	1	0	1	1	1	1	IclR	helix-turn-helix	domain
MarR_2	PF12802.7	gi|288559390|ref|YP_003422876.1|	-	0.0026	17.6	0.0	0.0042	16.9	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_36	PF13730.6	gi|288559390|ref|YP_003422876.1|	-	0.02	14.8	0.0	0.046	13.7	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
TrmB	PF01978.19	gi|288559390|ref|YP_003422876.1|	-	0.021	14.7	0.0	0.043	13.7	0.0	1.5	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_40	PF14493.6	gi|288559390|ref|YP_003422876.1|	-	0.04	14.4	0.1	0.082	13.4	0.1	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
HxlR	PF01638.17	gi|288559390|ref|YP_003422876.1|	-	0.091	12.6	0.0	0.17	11.7	0.0	1.4	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
DarT	PF14487.6	gi|288559390|ref|YP_003422876.1|	-	0.16	11.8	0.0	0.26	11.1	0.0	1.3	1	0	0	1	1	1	0	ssDNA	thymidine	ADP-ribosyltransferase,	DarT
ATC_hydrolase	PF14196.6	gi|288559390|ref|YP_003422876.1|	-	0.18	12.6	2.4	0.35	11.7	1.8	1.8	2	1	0	2	2	2	0	L-2-amino-thiazoline-4-carboxylic	acid	hydrolase
MarR	PF01047.22	gi|288559390|ref|YP_003422876.1|	-	0.18	11.7	0.1	0.28	11.1	0.1	1.3	1	0	0	1	1	1	0	MarR	family
Helicase_C_2	PF13307.6	gi|288559391|ref|YP_003422877.1|	-	1.1e-19	71.3	0.0	2.8e-19	69.9	0.0	1.6	1	0	0	1	1	1	1	Helicase	C-terminal	domain
ResIII	PF04851.15	gi|288559391|ref|YP_003422877.1|	-	1.8e-08	34.6	0.1	4.6e-08	33.3	0.1	1.7	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
DEAD_2	PF06733.15	gi|288559391|ref|YP_003422877.1|	-	3.3e-06	26.8	0.6	1.1e-05	25.1	0.4	1.9	1	1	0	1	1	1	1	DEAD_2
Helicase_C	PF00271.31	gi|288559391|ref|YP_003422877.1|	-	0.00038	20.8	0.1	0.0015	18.9	0.0	2.1	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
AAA_22	PF13401.6	gi|288559391|ref|YP_003422877.1|	-	0.0019	18.5	0.1	1.5	9.1	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
DEAD	PF00270.29	gi|288559391|ref|YP_003422877.1|	-	0.0064	16.3	1.2	2.8	7.7	0.3	2.9	2	1	0	2	2	2	2	DEAD/DEAH	box	helicase
AAA_30	PF13604.6	gi|288559391|ref|YP_003422877.1|	-	0.01	15.6	0.0	0.18	11.5	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.6	gi|288559391|ref|YP_003422877.1|	-	0.039	14.3	0.0	0.2	12.0	0.0	2.1	2	0	0	2	2	2	0	AAA	ATPase	domain
APOC4	PF15119.6	gi|288559391|ref|YP_003422877.1|	-	0.17	12.2	0.1	0.51	10.6	0.0	1.8	2	0	0	2	2	2	0	Apolipoprotein	C4
DUF45	PF01863.17	gi|288559392|ref|YP_003422878.1|	-	4.7e-53	180.3	0.6	5.4e-53	180.1	0.6	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF45
SprT-like	PF10263.9	gi|288559392|ref|YP_003422878.1|	-	0.0022	17.8	0.0	0.0035	17.2	0.0	1.4	1	0	0	1	1	1	1	SprT-like	family
Peptidase_M10	PF00413.24	gi|288559392|ref|YP_003422878.1|	-	0.008	16.0	0.0	0.011	15.6	0.0	1.3	1	1	0	1	1	1	1	Matrixin
WLM	PF08325.10	gi|288559392|ref|YP_003422878.1|	-	0.049	13.7	0.0	0.079	13.0	0.0	1.2	1	0	0	1	1	1	0	WLM	domain
Peptidase_M57	PF12388.8	gi|288559392|ref|YP_003422878.1|	-	0.23	11.0	0.0	0.36	10.4	0.0	1.2	1	0	0	1	1	1	0	Dual-action	HEIGH	metallo-peptidase
His_biosynth	PF00977.21	gi|288559393|ref|YP_003422879.1|	-	1.4e-80	270.1	0.5	1.7e-80	269.8	0.5	1.1	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
ThiG	PF05690.14	gi|288559393|ref|YP_003422879.1|	-	3.3e-07	29.9	0.3	0.017	14.4	0.0	2.2	2	0	0	2	2	2	2	Thiazole	biosynthesis	protein	ThiG
Dus	PF01207.17	gi|288559393|ref|YP_003422879.1|	-	8.1e-07	28.4	0.4	0.00015	21.0	0.1	2.1	2	0	0	2	2	2	2	Dihydrouridine	synthase	(Dus)
NMO	PF03060.15	gi|288559393|ref|YP_003422879.1|	-	9.3e-07	28.5	0.2	0.0025	17.3	0.1	2.1	2	0	0	2	2	2	2	Nitronate	monooxygenase
G3P_antiterm	PF04309.12	gi|288559393|ref|YP_003422879.1|	-	4e-06	26.3	0.1	0.00046	19.6	0.0	2.2	2	0	0	2	2	2	1	Glycerol-3-phosphate	responsive	antiterminator
DHO_dh	PF01180.21	gi|288559393|ref|YP_003422879.1|	-	2.6e-05	23.6	0.0	0.031	13.5	0.0	2.1	2	0	0	2	2	2	2	Dihydroorotate	dehydrogenase
IMPDH	PF00478.25	gi|288559393|ref|YP_003422879.1|	-	0.00035	19.7	0.2	0.52	9.2	0.0	2.2	2	0	0	2	2	2	2	IMP	dehydrogenase	/	GMP	reductase	domain
TMP-TENI	PF02581.17	gi|288559393|ref|YP_003422879.1|	-	0.0033	16.8	0.2	0.64	9.3	0.0	2.2	2	0	0	2	2	2	2	Thiamine	monophosphate	synthase
PcrB	PF01884.17	gi|288559393|ref|YP_003422879.1|	-	0.037	13.5	0.1	0.072	12.5	0.1	1.6	1	0	0	1	1	1	0	PcrB	family
IF-2	PF11987.8	gi|288559393|ref|YP_003422879.1|	-	0.11	12.6	0.0	0.24	11.5	0.0	1.5	1	0	0	1	1	1	0	Translation-initiation	factor	2
DUF561	PF04481.12	gi|288559393|ref|YP_003422879.1|	-	0.15	11.2	0.1	8.2	5.5	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF561)
HhH-GPD	PF00730.25	gi|288559394|ref|YP_003422880.1|	-	6e-14	52.4	0.0	1e-13	51.6	0.0	1.3	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
OGG_N	PF07934.12	gi|288559394|ref|YP_003422880.1|	-	1.2e-06	28.6	0.2	2.4e-06	27.6	0.2	1.5	1	1	0	1	1	1	1	8-oxoguanine	DNA	glycosylase,	N-terminal	domain
HHH	PF00633.23	gi|288559394|ref|YP_003422880.1|	-	6.1e-05	22.7	0.0	0.00017	21.3	0.0	1.7	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
Tyr_Deacylase	PF02580.16	gi|288559395|ref|YP_003422881.1|	-	2.8e-55	186.8	0.0	3.1e-55	186.7	0.0	1.0	1	0	0	1	1	1	1	D-Tyr-tRNA(Tyr)	deacylase
MarR	PF01047.22	gi|288559396|ref|YP_003422882.1|	-	1.6e-11	44.0	0.0	2.9e-11	43.1	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.6	gi|288559396|ref|YP_003422882.1|	-	1.3e-07	31.1	0.0	2.3e-07	30.3	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.7	gi|288559396|ref|YP_003422882.1|	-	1.3e-06	28.2	0.0	1.9e-06	27.6	0.0	1.2	1	0	0	1	1	1	1	MarR	family
HxlR	PF01638.17	gi|288559396|ref|YP_003422882.1|	-	4.3e-06	26.5	0.0	7.6e-06	25.7	0.0	1.5	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_34	PF13601.6	gi|288559396|ref|YP_003422882.1|	-	1.2e-05	25.4	0.1	2.4e-05	24.4	0.0	1.6	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_27	PF13463.6	gi|288559396|ref|YP_003422882.1|	-	1.3e-05	25.6	0.0	2.2e-05	24.8	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
B-block_TFIIIC	PF04182.12	gi|288559396|ref|YP_003422882.1|	-	0.0049	17.0	0.0	0.01	16.0	0.0	1.6	1	1	0	1	1	1	1	B-block	binding	subunit	of	TFIIIC
PadR	PF03551.14	gi|288559396|ref|YP_003422882.1|	-	0.0051	16.8	0.0	0.011	15.7	0.0	1.5	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
TrmB	PF01978.19	gi|288559396|ref|YP_003422882.1|	-	0.0076	16.1	0.2	0.017	15.0	0.1	1.6	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
DUF3116	PF11313.8	gi|288559396|ref|YP_003422882.1|	-	0.017	14.9	0.1	0.042	13.7	0.1	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3116)
MAGE	PF01454.19	gi|288559396|ref|YP_003422882.1|	-	0.035	13.8	0.1	0.044	13.5	0.1	1.2	1	0	0	1	1	1	0	MAGE	family
HTH_36	PF13730.6	gi|288559396|ref|YP_003422882.1|	-	0.04	13.9	0.0	0.1	12.6	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_45	PF14947.6	gi|288559396|ref|YP_003422882.1|	-	0.045	13.7	0.1	0.12	12.4	0.0	1.9	1	1	1	2	2	2	0	Winged	helix-turn-helix
HTH_Crp_2	PF13545.6	gi|288559396|ref|YP_003422882.1|	-	0.18	11.8	0.0	0.26	11.3	0.0	1.4	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
MFS_1	PF07690.16	gi|288559397|ref|YP_003422883.1|	-	3.3e-45	154.6	57.0	3.3e-45	154.6	57.0	2.9	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
MFS_2	PF13347.6	gi|288559397|ref|YP_003422883.1|	-	4e-07	29.0	18.5	4e-07	29.0	18.5	3.2	1	1	2	3	3	3	2	MFS/sugar	transport	protein
MFS_3	PF05977.13	gi|288559397|ref|YP_003422883.1|	-	8.6e-07	27.7	5.0	8.6e-07	27.7	5.0	3.0	2	1	1	3	3	3	2	Transmembrane	secretion	effector
PUCC	PF03209.15	gi|288559397|ref|YP_003422883.1|	-	1.9e-05	23.9	10.7	1.9e-05	23.9	10.7	3.0	2	1	1	3	3	3	2	PUCC	protein
Sugar_tr	PF00083.24	gi|288559397|ref|YP_003422883.1|	-	0.00068	18.6	19.6	0.00068	18.6	19.6	4.1	1	1	1	3	3	3	3	Sugar	(and	other)	transporter
EamA	PF00892.20	gi|288559397|ref|YP_003422883.1|	-	0.0013	18.9	4.4	0.0013	18.9	4.4	5.9	2	1	5	7	7	7	1	EamA-like	transporter	family
MFS_1	PF07690.16	gi|288559398|ref|YP_003422884.1|	-	5.2e-49	167.0	40.3	5.2e-49	167.0	40.3	2.2	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
MFS_2	PF13347.6	gi|288559398|ref|YP_003422884.1|	-	4.1e-05	22.3	54.9	0.00012	20.8	29.1	3.2	1	1	2	3	3	3	2	MFS/sugar	transport	protein
EamA	PF00892.20	gi|288559398|ref|YP_003422884.1|	-	0.00081	19.6	3.6	0.00081	19.6	3.6	5.6	1	1	2	5	5	5	1	EamA-like	transporter	family
Sugar_tr	PF00083.24	gi|288559398|ref|YP_003422884.1|	-	1.1	8.1	39.9	0.78	8.5	4.8	4.0	1	1	1	3	3	3	0	Sugar	(and	other)	transporter
Phage_holin_1	PF04531.13	gi|288559398|ref|YP_003422884.1|	-	1.8	9.1	7.6	0.37	11.4	0.3	3.6	2	2	0	2	2	2	0	Bacteriophage	holin
CitMHS	PF03600.16	gi|288559399|ref|YP_003422885.1|	-	5.9e-20	71.7	25.6	5.9e-20	71.7	25.6	2.1	1	1	1	2	2	2	1	Citrate	transporter
TetR_N	PF00440.23	gi|288559400|ref|YP_003422886.1|	-	2.2e-09	36.9	0.1	3.5e-09	36.3	0.1	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	tetR	family
TetR_C_24	PF17932.1	gi|288559400|ref|YP_003422886.1|	-	0.00047	20.4	0.0	0.0011	19.3	0.0	1.6	1	0	0	1	1	1	1	Tetracyclin	repressor-like,	C-terminal	domain
Peptidase_C1	PF00112.23	gi|288559401|ref|YP_003422887.1|	-	3.6e-23	82.8	0.0	1.3e-22	80.9	0.0	2.0	1	0	0	1	1	1	1	Papain	family	cysteine	protease
Big_3_5	PF16640.5	gi|288559401|ref|YP_003422887.1|	-	4.8e-14	52.3	13.9	1.7e-09	37.7	9.7	3.4	3	0	0	3	3	3	2	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|288559401|ref|YP_003422887.1|	-	8.8e-13	48.1	8.0	5.4e-07	29.5	6.3	2.9	2	0	0	2	2	2	2	Bacterial	Ig-like	domain	(group	1)
Lectin_like	PF18560.1	gi|288559401|ref|YP_003422887.1|	-	2.3e-09	37.6	1.1	2.3e-09	37.6	1.1	3.1	2	1	1	3	3	3	1	Lectin	like	domain
MG4	PF17789.1	gi|288559401|ref|YP_003422887.1|	-	6.2e-08	32.7	3.2	0.00053	20.1	0.0	3.7	3	1	0	3	3	3	2	Macroglobulin	domain	MG4
Invasin_D3	PF09134.10	gi|288559401|ref|YP_003422887.1|	-	2e-07	31.2	16.7	5.6e-05	23.4	9.0	3.3	3	0	0	3	3	3	2	Invasin,	domain	3
CarboxypepD_reg	PF13620.6	gi|288559401|ref|YP_003422887.1|	-	6.9e-06	26.2	5.1	0.0061	16.8	1.7	2.8	2	0	0	2	2	2	2	Carboxypeptidase	regulatory-like	domain
Peptidase_C1_2	PF03051.15	gi|288559401|ref|YP_003422887.1|	-	0.0015	17.4	0.1	0.034	12.9	0.1	2.3	2	0	0	2	2	2	1	Peptidase	C1-like	family
YtkA	PF13115.6	gi|288559401|ref|YP_003422887.1|	-	0.018	15.7	0.6	0.069	13.8	0.6	2.0	1	0	0	1	1	1	0	YtkA-like
Filamin	PF00630.19	gi|288559401|ref|YP_003422887.1|	-	0.075	13.9	3.9	0.91	10.4	2.7	3.3	2	1	0	2	2	2	0	Filamin/ABP280	repeat
Glyco_hydro_79C	PF16862.5	gi|288559401|ref|YP_003422887.1|	-	2.5	9.0	8.8	0.93	10.4	3.7	3.0	2	1	1	3	3	3	0	Glycosyl	hydrolase	family	79	C-terminal	beta	domain
Chlam_PMP	PF02415.17	gi|288559401|ref|YP_003422887.1|	-	6.6	7.4	29.2	3	8.5	1.8	6.7	6	1	0	6	6	5	0	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
Zn_Tnp_IS1595	PF12760.7	gi|288559402|ref|YP_003422888.1|	-	0.00011	22.0	1.5	0.00013	21.8	1.5	1.1	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|288559402|ref|YP_003422888.1|	-	0.00037	19.9	2.5	0.00052	19.5	2.4	1.5	1	1	0	1	1	1	1	TFIIB	zinc-binding
zf-C2H2	PF00096.26	gi|288559402|ref|YP_003422888.1|	-	0.00068	19.9	0.4	0.014	15.8	0.0	2.1	2	0	0	2	2	2	1	Zinc	finger,	C2H2	type
Zn-ribbon_8	PF09723.10	gi|288559402|ref|YP_003422888.1|	-	0.00093	19.3	1.7	0.46	10.7	0.1	2.1	2	0	0	2	2	2	2	Zinc	ribbon	domain
zinc_ribbon_9	PF14369.6	gi|288559402|ref|YP_003422888.1|	-	0.0011	19.2	0.8	0.49	10.7	0.1	2.1	2	0	0	2	2	2	2	zinc-ribbon
zf-TFIIB	PF13453.6	gi|288559402|ref|YP_003422888.1|	-	0.0014	17.9	1.4	0.0014	17.9	1.4	1.5	2	0	0	2	2	2	1	Transcription	factor	zinc-finger
zf_UBZ	PF18439.1	gi|288559402|ref|YP_003422888.1|	-	0.0022	17.5	1.3	0.75	9.4	0.1	2.1	2	0	0	2	2	2	2	Ubiquitin-Binding	Zinc	Finger
OrfB_Zn_ribbon	PF07282.11	gi|288559402|ref|YP_003422888.1|	-	0.0034	17.3	0.8	0.004	17.0	0.8	1.2	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
zf-ribbon_3	PF13248.6	gi|288559402|ref|YP_003422888.1|	-	0.0044	16.4	1.6	0.097	12.1	0.1	2.1	2	0	0	2	2	2	1	zinc-ribbon	domain
DZR	PF12773.7	gi|288559402|ref|YP_003422888.1|	-	0.0072	16.3	1.7	0.039	14.0	2.3	1.4	1	1	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_2	PF13240.6	gi|288559402|ref|YP_003422888.1|	-	0.0095	15.6	5.1	0.031	14.0	4.7	1.9	1	1	1	2	2	2	2	zinc-ribbon	domain
Ribosomal_L37e	PF01907.19	gi|288559402|ref|YP_003422888.1|	-	0.015	15.4	0.8	0.02	15.0	0.8	1.2	1	0	0	1	1	1	0	Ribosomal	protein	L37e
Lar_restr_allev	PF14354.6	gi|288559402|ref|YP_003422888.1|	-	0.016	15.5	2.1	0.027	14.8	2.1	1.5	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
DUF4503	PF14951.6	gi|288559402|ref|YP_003422888.1|	-	0.018	13.5	0.4	0.02	13.4	0.4	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4503)
C1_2	PF03107.16	gi|288559402|ref|YP_003422888.1|	-	0.022	15.1	1.4	0.028	14.7	1.4	1.2	1	0	0	1	1	1	0	C1	domain
zf-C2H2_3	PF13878.6	gi|288559402|ref|YP_003422888.1|	-	0.025	14.4	1.2	0.23	11.3	0.0	2.1	2	0	0	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
RPA_interact_C	PF14768.6	gi|288559402|ref|YP_003422888.1|	-	0.025	15.1	0.3	0.026	15.1	0.3	1.1	1	0	0	1	1	1	0	Replication	protein	A	interacting	C-terminal
Rubredoxin_2	PF18073.1	gi|288559402|ref|YP_003422888.1|	-	0.026	14.3	5.2	0.63	9.8	0.6	2.1	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
zn-ribbon_14	PF16503.5	gi|288559402|ref|YP_003422888.1|	-	0.031	13.8	2.0	0.93	9.1	0.3	2.2	2	0	0	2	2	2	0	Zinc-ribbon
C1_1	PF00130.22	gi|288559402|ref|YP_003422888.1|	-	0.033	14.1	0.8	0.039	13.9	0.8	1.1	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
CpXC	PF14353.6	gi|288559402|ref|YP_003422888.1|	-	0.033	14.2	2.4	0.42	10.7	0.1	2.0	1	1	1	2	2	2	0	CpXC	protein
UPF0547	PF10571.9	gi|288559402|ref|YP_003422888.1|	-	0.037	14.1	6.7	0.3	11.2	6.7	1.9	1	1	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
YhfH	PF14149.6	gi|288559402|ref|YP_003422888.1|	-	0.038	14.0	3.3	2.7	8.0	0.4	2.1	1	1	1	2	2	2	0	YhfH-like	protein
Ribosomal_L37ae	PF01780.19	gi|288559402|ref|YP_003422888.1|	-	0.04	14.0	0.5	0.044	13.9	0.5	1.1	1	0	0	1	1	1	0	Ribosomal	L37ae	protein	family
zf-C2H2_11	PF16622.5	gi|288559402|ref|YP_003422888.1|	-	0.076	12.8	0.8	0.6	9.9	0.0	2.0	2	0	0	2	2	2	0	zinc-finger	C2H2-type
DUF35_N	PF12172.8	gi|288559402|ref|YP_003422888.1|	-	0.12	12.3	0.3	0.12	12.3	0.3	1.9	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
HypA	PF01155.19	gi|288559402|ref|YP_003422888.1|	-	0.22	11.5	1.7	0.3	11.1	1.7	1.4	1	1	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Mu-like_Com	PF10122.9	gi|288559402|ref|YP_003422888.1|	-	0.29	10.6	3.9	9.3	5.8	2.1	2.1	1	1	1	2	2	2	0	Mu-like	prophage	protein	Com
zf-HIT	PF04438.16	gi|288559402|ref|YP_003422888.1|	-	0.37	10.7	5.1	3.9	7.4	0.2	2.1	2	0	0	2	2	2	0	HIT	zinc	finger
zf-ACC	PF17848.1	gi|288559402|ref|YP_003422888.1|	-	0.48	10.5	4.5	9.9	6.3	0.1	2.4	2	1	0	2	2	2	0	Acetyl-coA	carboxylase	zinc	finger	domain
TFIIS_C	PF01096.18	gi|288559402|ref|YP_003422888.1|	-	0.55	10.1	6.6	3.4	7.6	0.8	2.1	1	1	1	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zinc_ribbon_13	PF09855.9	gi|288559402|ref|YP_003422888.1|	-	0.6	10.3	4.2	3.5	7.9	0.6	2.1	1	1	1	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
DNA_ligase_ZBD	PF03119.16	gi|288559402|ref|YP_003422888.1|	-	0.64	10.1	5.8	0.32	11.0	2.7	2.2	2	1	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
DNA_RNApol_7kD	PF03604.13	gi|288559402|ref|YP_003422888.1|	-	0.97	9.2	6.5	16	5.3	0.7	2.1	1	1	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zinc_ribbon_10	PF10058.9	gi|288559402|ref|YP_003422888.1|	-	1.4	8.7	5.4	16	5.4	5.4	2.0	1	1	0	1	1	1	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
Zn_ribbon_SprT	PF17283.2	gi|288559402|ref|YP_003422888.1|	-	1.6	8.7	7.0	19	5.3	7.0	2.0	1	1	0	1	1	1	0	SprT-like	zinc	ribbon	domain
Pro_isomerase	PF00160.21	gi|288559403|ref|YP_003422889.1|	-	7.6e-46	156.3	0.0	8.8e-46	156.1	0.0	1.0	1	0	0	1	1	1	1	Cyclophilin	type	peptidyl-prolyl	cis-trans	isomerase/CLD
YrhC	PF14143.6	gi|288559404|ref|YP_003422890.1|	-	0.043	13.9	0.9	0.072	13.2	0.9	1.3	1	0	0	1	1	1	0	YrhC-like	protein
Aldo_ket_red	PF00248.21	gi|288559406|ref|YP_003422892.1|	-	6.1e-37	127.4	0.0	6.8e-36	124.0	0.0	1.9	1	1	1	2	2	2	1	Aldo/keto	reductase	family
Fer4_17	PF13534.6	gi|288559406|ref|YP_003422892.1|	-	2.1e-12	47.4	11.7	4.4e-12	46.4	11.7	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|288559406|ref|YP_003422892.1|	-	0.00015	21.8	11.7	0.00022	21.3	10.7	1.8	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|288559406|ref|YP_003422892.1|	-	0.00021	21.7	9.2	0.00038	20.8	9.2	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|288559406|ref|YP_003422892.1|	-	0.00039	20.5	13.3	0.0012	19.0	13.3	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|288559406|ref|YP_003422892.1|	-	0.0012	19.0	1.4	0.0012	19.0	1.4	2.3	1	1	1	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|288559406|ref|YP_003422892.1|	-	0.0025	17.9	5.6	0.24	11.6	0.9	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_20	PF14691.6	gi|288559406|ref|YP_003422892.1|	-	0.011	15.4	0.8	0.011	15.4	0.8	1.9	2	0	0	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_4	PF12800.7	gi|288559406|ref|YP_003422892.1|	-	0.02	15.3	3.2	0.02	15.3	3.2	2.8	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4	PF00037.27	gi|288559406|ref|YP_003422892.1|	-	0.026	14.3	4.1	0.026	14.3	4.1	2.7	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|288559406|ref|YP_003422892.1|	-	0.065	13.8	14.9	0.26	11.9	15.1	1.9	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|288559406|ref|YP_003422892.1|	-	0.46	10.7	16.4	0.18	12.0	1.7	2.6	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|288559406|ref|YP_003422892.1|	-	0.73	10.8	14.2	31	5.6	13.9	2.6	1	1	1	2	2	2	0	4Fe-4S	double	cluster	binding	domain
Aminotran_3	PF00202.21	gi|288559407|ref|YP_003422893.1|	-	1.9e-117	392.4	0.0	2.8e-117	391.8	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class-III
Aminotran_1_2	PF00155.21	gi|288559407|ref|YP_003422893.1|	-	0.00034	19.9	0.0	0.00044	19.5	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.19	gi|288559407|ref|YP_003422893.1|	-	0.0017	17.4	0.0	0.0032	16.5	0.0	1.5	2	0	0	2	2	2	1	Aminotransferase	class-V
NUDIX	PF00293.28	gi|288559409|ref|YP_003422895.1|	-	1e-17	64.4	0.0	1.3e-17	64.1	0.0	1.1	1	0	0	1	1	1	1	NUDIX	domain
NUDIX_4	PF14815.6	gi|288559409|ref|YP_003422895.1|	-	0.0025	17.8	0.0	0.0048	16.9	0.0	1.4	1	1	0	1	1	1	1	NUDIX	domain
DUF1947	PF09183.10	gi|288559409|ref|YP_003422895.1|	-	0.074	13.4	0.0	0.13	12.6	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1947)
Orn_Arg_deC_N	PF02784.16	gi|288559410|ref|YP_003422896.1|	-	3.7e-52	177.2	0.0	5.2e-52	176.7	0.0	1.2	1	0	0	1	1	1	1	Pyridoxal-dependent	decarboxylase,	pyridoxal	binding	domain
Orn_DAP_Arg_deC	PF00278.22	gi|288559410|ref|YP_003422896.1|	-	3.4e-26	91.3	0.0	4e-26	91.1	0.0	1.3	1	0	0	1	1	1	1	Pyridoxal-dependent	decarboxylase,	C-terminal	sheet	domain
Ala_racemase_N	PF01168.20	gi|288559410|ref|YP_003422896.1|	-	0.00034	20.3	0.0	0.00077	19.2	0.0	1.6	1	1	0	1	1	1	1	Alanine	racemase,	N-terminal	domain
DAP_epimerase	PF01678.19	gi|288559411|ref|YP_003422897.1|	-	6.8e-66	219.9	1.1	1.5e-36	125.2	0.2	2.0	2	0	0	2	2	2	2	Diaminopimelate	epimerase
PhzC-PhzF	PF02567.16	gi|288559411|ref|YP_003422897.1|	-	0.0035	16.8	0.0	0.0051	16.3	0.0	1.1	1	0	0	1	1	1	1	Phenazine	biosynthesis-like	protein
Ribosomal_L7Ae	PF01248.26	gi|288559411|ref|YP_003422897.1|	-	0.14	11.9	0.0	0.26	11.0	0.0	1.4	1	0	0	1	1	1	0	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
HTH_Tnp_1	PF01527.20	gi|288559412|ref|YP_003422898.1|	-	0.025	14.9	0.0	0.025	14.9	0.0	1.1	1	0	0	1	1	1	0	Transposase
DUF1804	PF08822.11	gi|288559412|ref|YP_003422898.1|	-	0.11	12.5	0.0	0.13	12.2	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1804)
Jag_N	PF14804.6	gi|288559412|ref|YP_003422898.1|	-	0.12	12.7	0.1	0.16	12.4	0.1	1.3	1	0	0	1	1	1	0	Jag	N-terminus
Fer4_16	PF13484.6	gi|288559413|ref|YP_003422899.1|	-	5.7e-08	33.6	9.6	1.2e-07	32.6	9.6	1.5	1	0	0	1	1	1	1	4Fe-4S	double	cluster	binding	domain
Fer4_7	PF12838.7	gi|288559413|ref|YP_003422899.1|	-	1.1e-05	26.0	8.2	1.9e-05	25.1	8.2	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|288559413|ref|YP_003422899.1|	-	5.6e-05	23.2	10.3	0.00041	20.4	10.3	2.1	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|288559413|ref|YP_003422899.1|	-	0.00039	20.1	4.4	0.00039	20.1	4.4	3.1	3	0	0	3	3	3	1	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|288559413|ref|YP_003422899.1|	-	0.0056	16.7	6.4	0.0056	16.7	6.4	2.8	2	1	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|288559413|ref|YP_003422899.1|	-	0.11	12.7	12.8	1	9.6	13.1	2.2	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Phage_int_SAM_6	PF18644.1	gi|288559413|ref|YP_003422899.1|	-	0.12	12.4	0.3	0.18	11.8	0.3	1.3	1	0	0	1	1	1	0	Phage	integrase	SAM-like	domain
Fer4_21	PF14697.6	gi|288559413|ref|YP_003422899.1|	-	0.36	11.0	10.7	15	5.8	10.8	2.3	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|288559413|ref|YP_003422899.1|	-	0.54	10.8	9.7	1.5	9.5	9.7	1.8	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|288559413|ref|YP_003422899.1|	-	0.77	10.8	10.7	5.2	8.2	3.6	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
SAP	PF02037.27	gi|288559414|ref|YP_003422900.1|	-	1.3e-07	31.1	0.2	2.7e-07	30.2	0.2	1.5	1	0	0	1	1	1	1	SAP	domain
MCM3AP_GANP	PF16769.5	gi|288559414|ref|YP_003422900.1|	-	0.19	9.9	1.5	0.25	9.6	1.5	1.0	1	0	0	1	1	1	0	MCM3AP	domain	of	GANP
MTS	PF05175.14	gi|288559415|ref|YP_003422901.1|	-	1.7e-16	60.3	0.0	3.8e-14	52.6	0.0	2.0	2	0	0	2	2	2	1	Methyltransferase	small	domain
PrmA	PF06325.13	gi|288559415|ref|YP_003422901.1|	-	7.4e-12	45.3	0.0	1.3e-11	44.4	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_31	PF13847.6	gi|288559415|ref|YP_003422901.1|	-	1.2e-09	38.2	0.2	1.5e-09	37.8	0.2	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|288559415|ref|YP_003422901.1|	-	7.7e-08	33.0	0.0	2.1e-07	31.5	0.0	1.8	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|288559415|ref|YP_003422901.1|	-	1.5e-06	28.1	0.0	3.6e-06	26.9	0.0	1.5	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|288559415|ref|YP_003422901.1|	-	1.9e-06	28.5	0.1	8.4e-06	26.5	0.1	2.0	1	1	0	1	1	1	1	Methyltransferase	domain
TehB	PF03848.14	gi|288559415|ref|YP_003422901.1|	-	4.3e-06	26.3	0.5	7.8e-06	25.4	0.1	1.5	2	0	0	2	2	2	1	Tellurite	resistance	protein	TehB
Methyltransf_16	PF10294.9	gi|288559415|ref|YP_003422901.1|	-	5.2e-06	26.3	0.0	8.1e-06	25.7	0.0	1.3	1	0	0	1	1	1	1	Lysine	methyltransferase
Methyltransf_11	PF08241.12	gi|288559415|ref|YP_003422901.1|	-	5.6e-06	26.9	0.0	1.4e-05	25.7	0.0	1.8	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.7	gi|288559415|ref|YP_003422901.1|	-	2.3e-05	24.4	0.0	3.7e-05	23.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.19	gi|288559415|ref|YP_003422901.1|	-	4.3e-05	23.4	0.0	7.5e-05	22.6	0.0	1.4	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
CMAS	PF02353.20	gi|288559415|ref|YP_003422901.1|	-	0.0013	18.1	0.0	0.0061	15.9	0.0	1.9	1	1	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Met_10	PF02475.16	gi|288559415|ref|YP_003422901.1|	-	0.0017	18.2	0.1	0.0025	17.6	0.1	1.3	1	1	0	1	1	1	1	Met-10+	like-protein
GCD14	PF08704.10	gi|288559415|ref|YP_003422901.1|	-	0.0026	17.5	0.1	0.005	16.5	0.1	1.4	1	1	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
N6_Mtase	PF02384.16	gi|288559415|ref|YP_003422901.1|	-	0.0028	17.0	0.0	0.0042	16.4	0.0	1.3	1	0	0	1	1	1	1	N-6	DNA	Methylase
Methyltransf_15	PF09445.10	gi|288559415|ref|YP_003422901.1|	-	0.0082	15.7	0.0	0.013	15.1	0.0	1.2	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
TRM	PF02005.16	gi|288559415|ref|YP_003422901.1|	-	0.0094	15.2	0.0	0.012	14.8	0.0	1.1	1	0	0	1	1	1	1	N2,N2-dimethylguanosine	tRNA	methyltransferase
Methyltransf_3	PF01596.17	gi|288559415|ref|YP_003422901.1|	-	0.037	13.2	0.1	0.065	12.4	0.1	1.4	1	0	0	1	1	1	0	O-methyltransferase
rRNA_methylase	PF06962.12	gi|288559415|ref|YP_003422901.1|	-	0.042	13.8	0.0	0.098	12.6	0.0	1.6	2	0	0	2	2	2	0	Putative	rRNA	methylase
NodS	PF05401.11	gi|288559415|ref|YP_003422901.1|	-	0.059	13.0	0.0	0.095	12.3	0.0	1.3	1	0	0	1	1	1	0	Nodulation	protein	S	(NodS)
RrnaAD	PF00398.20	gi|288559415|ref|YP_003422901.1|	-	0.085	11.9	0.1	0.16	11.0	0.0	1.5	2	0	0	2	2	2	0	Ribosomal	RNA	adenine	dimethylase
Cons_hypoth95	PF03602.15	gi|288559415|ref|YP_003422901.1|	-	0.16	11.6	0.0	0.25	11.0	0.0	1.3	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
RrnaAD	PF00398.20	gi|288559416|ref|YP_003422902.1|	-	7.3e-54	182.6	4.7	3.6e-53	180.3	4.7	1.8	1	1	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_25	PF13649.6	gi|288559416|ref|YP_003422902.1|	-	4.8e-09	36.8	0.0	1.3e-08	35.5	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_4	PF02390.17	gi|288559416|ref|YP_003422902.1|	-	1.1e-07	31.5	0.0	2.8e-07	30.1	0.0	1.7	1	0	0	1	1	1	1	Putative	methyltransferase
PCMT	PF01135.19	gi|288559416|ref|YP_003422902.1|	-	3.4e-07	30.2	0.0	5.8e-07	29.5	0.0	1.3	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Met_10	PF02475.16	gi|288559416|ref|YP_003422902.1|	-	1.9e-06	27.8	1.2	2.4e-06	27.5	0.1	1.7	2	0	0	2	2	2	1	Met-10+	like-protein
Methyltransf_31	PF13847.6	gi|288559416|ref|YP_003422902.1|	-	3.3e-06	27.0	0.0	5.7e-06	26.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|288559416|ref|YP_003422902.1|	-	1.1e-05	25.1	0.0	1.9e-05	24.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_11	PF08241.12	gi|288559416|ref|YP_003422902.1|	-	4.5e-05	24.0	0.0	9.6e-05	23.0	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|288559416|ref|YP_003422902.1|	-	4.7e-05	22.8	0.2	0.00012	21.5	0.1	1.6	2	0	0	2	2	2	1	ubiE/COQ5	methyltransferase	family
Cons_hypoth95	PF03602.15	gi|288559416|ref|YP_003422902.1|	-	8.6e-05	22.3	0.1	0.00021	21.0	0.0	1.8	2	0	0	2	2	2	1	Conserved	hypothetical	protein	95
PRMT5	PF05185.16	gi|288559416|ref|YP_003422902.1|	-	0.0002	21.2	2.1	0.048	13.5	0.3	2.2	2	0	0	2	2	2	2	PRMT5	arginine-N-methyltransferase
tRNA_U5-meth_tr	PF05958.11	gi|288559416|ref|YP_003422902.1|	-	0.0007	18.7	0.1	0.0017	17.4	0.1	1.6	1	0	0	1	1	1	1	tRNA	(Uracil-5-)-methyltransferase
Methyltransf_12	PF08242.12	gi|288559416|ref|YP_003422902.1|	-	0.0033	18.1	0.0	0.0076	17.0	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.20	gi|288559416|ref|YP_003422902.1|	-	0.0046	16.3	0.1	0.0097	15.2	0.0	1.5	2	0	0	2	2	2	1	Mycolic	acid	cyclopropane	synthetase
DREV	PF05219.12	gi|288559416|ref|YP_003422902.1|	-	0.0049	16.0	0.4	0.023	13.8	0.1	1.9	2	0	0	2	2	2	1	DREV	methyltransferase
Methyltransf_23	PF13489.6	gi|288559416|ref|YP_003422902.1|	-	0.0066	16.3	0.0	0.013	15.4	0.0	1.5	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_18	PF12847.7	gi|288559416|ref|YP_003422902.1|	-	0.0083	16.1	0.0	0.024	14.6	0.0	1.7	1	0	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.18	gi|288559416|ref|YP_003422902.1|	-	0.048	13.3	0.2	0.57	9.8	0.1	2.5	2	1	0	2	2	2	0	Putative	RNA	methylase	family	UPF0020
PrmA	PF06325.13	gi|288559416|ref|YP_003422902.1|	-	0.06	12.7	0.9	0.14	11.5	0.1	1.8	2	0	0	2	2	2	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltr_RsmB-F	PF01189.17	gi|288559416|ref|YP_003422902.1|	-	0.061	12.9	0.0	0.13	11.9	0.0	1.5	1	0	0	1	1	1	0	16S	rRNA	methyltransferase	RsmB/F
Methyltransf_15	PF09445.10	gi|288559416|ref|YP_003422902.1|	-	0.073	12.7	0.1	0.28	10.8	0.0	1.9	2	0	0	2	2	2	0	RNA	cap	guanine-N2	methyltransferase
Methyltransf_16	PF10294.9	gi|288559416|ref|YP_003422902.1|	-	0.074	12.8	0.0	0.16	11.7	0.0	1.6	1	0	0	1	1	1	0	Lysine	methyltransferase
DUF655	PF04919.12	gi|288559417|ref|YP_003422903.1|	-	5.2e-60	202.5	3.2	6.3e-60	202.2	3.2	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF655)
HHH_6	PF14579.6	gi|288559417|ref|YP_003422903.1|	-	2.4e-05	24.5	0.0	4.2e-05	23.7	0.0	1.5	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_3	PF12836.7	gi|288559417|ref|YP_003422903.1|	-	0.00019	21.6	0.0	0.00053	20.2	0.0	1.7	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_5	PF14520.6	gi|288559417|ref|YP_003422903.1|	-	0.033	14.8	0.1	0.089	13.4	0.1	1.7	1	0	0	1	1	1	0	Helix-hairpin-helix	domain
Big_3_5	PF16640.5	gi|288559418|ref|YP_003422904.1|	-	4.7e-22	78.0	33.7	5.2e-08	33.0	8.8	7.8	8	1	1	9	9	9	6	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|288559418|ref|YP_003422904.1|	-	8e-17	61.0	23.4	3.4e-08	33.4	5.6	5.8	6	0	0	6	6	6	3	Bacterial	Ig-like	domain	(group	1)
CarboxypepD_reg	PF13620.6	gi|288559418|ref|YP_003422904.1|	-	6.1e-09	36.0	17.5	0.012	15.9	0.3	6.3	7	0	0	7	7	7	3	Carboxypeptidase	regulatory-like	domain
Invasin_D3	PF09134.10	gi|288559418|ref|YP_003422904.1|	-	4.4e-08	33.3	35.2	9.5e-06	25.8	6.5	7.2	6	2	2	8	8	8	3	Invasin,	domain	3
MG4	PF17789.1	gi|288559418|ref|YP_003422904.1|	-	8.4e-08	32.3	8.8	0.021	15.0	0.0	5.0	3	2	0	3	3	3	3	Macroglobulin	domain	MG4
Y_Y_Y	PF07495.13	gi|288559418|ref|YP_003422904.1|	-	0.0083	16.1	1.7	0.0083	16.1	1.7	5.1	5	0	0	5	5	5	1	Y_Y_Y	domain
DUF2012	PF09430.10	gi|288559418|ref|YP_003422904.1|	-	0.11	12.6	0.4	8.4	6.5	0.0	2.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2012)
fn3	PF00041.21	gi|288559418|ref|YP_003422904.1|	-	2.3	8.6	7.4	3.9	7.9	0.1	4.3	5	0	0	5	5	5	0	Fibronectin	type	III	domain
RNA_pol_Rpb4	PF03874.16	gi|288559419|ref|YP_003422905.1|	-	1.6e-08	34.9	4.9	2.1e-08	34.5	4.9	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb4
ArsA_ATPase	PF02374.15	gi|288559419|ref|YP_003422905.1|	-	7.9e-05	22.0	1.6	8.6e-05	21.9	1.6	1.0	1	0	0	1	1	1	1	Anion-transporting	ATPase
HicB-like_2	PF15970.5	gi|288559419|ref|YP_003422905.1|	-	0.015	15.4	0.1	0.026	14.7	0.1	1.4	1	0	0	1	1	1	0	HicB_like	antitoxin	of	bacterial	toxin-antitoxin	system
CENP-T_C	PF15511.6	gi|288559419|ref|YP_003422905.1|	-	0.029	14.5	0.1	0.055	13.6	0.1	1.5	1	1	0	1	1	1	0	Centromere	kinetochore	component	CENP-T	histone	fold
AbrB_C	PF18277.1	gi|288559419|ref|YP_003422905.1|	-	7.9	6.2	10.5	1.9	8.2	0.6	2.7	3	0	0	3	3	3	0	AbrB	C-terminal	domain
Ribosomal_L21e	PF01157.18	gi|288559420|ref|YP_003422906.1|	-	8.5e-33	112.2	1.5	9.3e-33	112.1	1.5	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L21e
TrkA_C	PF02080.21	gi|288559420|ref|YP_003422906.1|	-	0.054	13.3	0.0	2.3	8.1	0.0	2.1	2	0	0	2	2	2	0	TrkA-C	domain
THUMP	PF02926.17	gi|288559421|ref|YP_003422907.1|	-	2.6e-09	37.3	2.5	2.6e-09	37.3	2.5	2.5	2	1	0	2	2	2	1	THUMP	domain
MIOX	PF05153.15	gi|288559421|ref|YP_003422907.1|	-	0.012	15.2	0.5	0.091	12.3	0.0	2.1	2	0	0	2	2	2	0	Myo-inositol	oxygenase
DUF3861	PF12977.7	gi|288559421|ref|YP_003422907.1|	-	0.04	14.1	0.2	0.14	12.3	0.1	1.9	2	0	0	2	2	2	0	Domain	of	Unknown	Function	with	PDB	structure	(DUF3861)
SRP54	PF00448.22	gi|288559422|ref|YP_003422908.1|	-	8.9e-73	244.1	0.3	3.4e-72	242.2	0.0	1.9	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
SRP_SPB	PF02978.19	gi|288559422|ref|YP_003422908.1|	-	1.3e-27	96.3	6.7	1.3e-27	96.3	6.7	3.1	4	0	0	4	4	3	1	Signal	peptide	binding	domain
SRP54_N	PF02881.19	gi|288559422|ref|YP_003422908.1|	-	2.5e-18	66.0	1.3	2.5e-18	66.0	1.3	2.5	3	0	0	3	3	1	1	SRP54-type	protein,	helical	bundle	domain
G-alpha	PF00503.20	gi|288559422|ref|YP_003422908.1|	-	4.3e-05	22.8	0.0	7e-05	22.1	0.0	1.5	1	0	0	1	1	1	1	G-protein	alpha	subunit
CbiA	PF01656.23	gi|288559422|ref|YP_003422908.1|	-	0.00068	19.7	0.1	0.0023	18.0	0.0	1.9	2	1	0	2	2	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_33	PF13671.6	gi|288559422|ref|YP_003422908.1|	-	0.00076	19.7	0.0	0.0019	18.4	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
MMR_HSR1	PF01926.23	gi|288559422|ref|YP_003422908.1|	-	0.0008	19.5	0.5	0.0069	16.5	0.0	2.6	3	1	0	3	3	2	1	50S	ribosome-binding	GTPase
Arf	PF00025.21	gi|288559422|ref|YP_003422908.1|	-	0.00099	18.6	0.1	0.0035	16.8	0.0	2.0	2	0	0	2	2	2	1	ADP-ribosylation	factor	family
AAA_17	PF13207.6	gi|288559422|ref|YP_003422908.1|	-	0.0011	19.4	2.6	0.0036	17.7	0.1	2.9	3	0	0	3	3	3	1	AAA	domain
ATP_bind_1	PF03029.17	gi|288559422|ref|YP_003422908.1|	-	0.0026	17.6	0.1	0.022	14.5	0.0	2.6	4	0	0	4	4	4	1	Conserved	hypothetical	ATP	binding	protein
cobW	PF02492.19	gi|288559422|ref|YP_003422908.1|	-	0.0028	17.3	0.4	0.019	14.6	0.4	2.1	1	1	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
ResIII	PF04851.15	gi|288559422|ref|YP_003422908.1|	-	0.0029	17.6	0.4	0.0051	16.8	0.4	1.5	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
Zeta_toxin	PF06414.12	gi|288559422|ref|YP_003422908.1|	-	0.0031	16.8	0.0	0.0061	15.9	0.0	1.4	1	0	0	1	1	1	1	Zeta	toxin
RNA_helicase	PF00910.22	gi|288559422|ref|YP_003422908.1|	-	0.0035	17.7	0.2	0.035	14.5	0.2	2.4	1	1	0	1	1	1	1	RNA	helicase
6PF2K	PF01591.18	gi|288559422|ref|YP_003422908.1|	-	0.0046	16.3	0.0	0.0087	15.4	0.0	1.5	1	0	0	1	1	1	1	6-phosphofructo-2-kinase
AAA_19	PF13245.6	gi|288559422|ref|YP_003422908.1|	-	0.011	16.1	0.0	0.027	14.8	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
AAA_16	PF13191.6	gi|288559422|ref|YP_003422908.1|	-	0.016	15.6	0.0	0.031	14.7	0.0	1.5	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_18	PF13238.6	gi|288559422|ref|YP_003422908.1|	-	0.017	15.7	0.0	0.042	14.4	0.0	1.8	1	1	0	1	1	1	0	AAA	domain
MobB	PF03205.14	gi|288559422|ref|YP_003422908.1|	-	0.017	15.0	0.3	0.078	12.9	0.1	2.1	1	1	1	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_7	PF12775.7	gi|288559422|ref|YP_003422908.1|	-	0.028	13.9	0.2	0.079	12.5	0.0	1.8	2	0	0	2	2	2	0	P-loop	containing	dynein	motor	region
Flavodoxin_3	PF12641.7	gi|288559422|ref|YP_003422908.1|	-	0.032	13.9	0.6	0.081	12.6	0.0	1.9	2	0	0	2	2	2	0	Flavodoxin	domain
TPR_15	PF13429.6	gi|288559422|ref|YP_003422908.1|	-	0.042	13.1	0.1	0.075	12.2	0.1	1.3	1	0	0	1	1	1	0	Tetratricopeptide	repeat
APS_kinase	PF01583.20	gi|288559422|ref|YP_003422908.1|	-	0.043	13.7	0.0	0.086	12.7	0.0	1.5	1	0	0	1	1	1	0	Adenylylsulphate	kinase
RecX	PF02631.16	gi|288559422|ref|YP_003422908.1|	-	0.05	14.1	1.0	0.98	9.9	0.0	3.2	3	1	0	3	3	3	0	RecX	family
Pox_A32	PF04665.12	gi|288559422|ref|YP_003422908.1|	-	0.052	13.0	0.4	0.14	11.6	0.4	1.8	1	1	0	1	1	1	0	Poxvirus	A32	protein
AAA	PF00004.29	gi|288559422|ref|YP_003422908.1|	-	0.065	13.7	2.8	0.85	10.0	0.4	3.2	1	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_28	PF13521.6	gi|288559422|ref|YP_003422908.1|	-	0.078	13.2	0.0	0.2	11.9	0.0	1.7	2	0	0	2	2	1	0	AAA	domain
SWI2_SNF2	PF18766.1	gi|288559422|ref|YP_003422908.1|	-	0.15	11.7	0.8	0.51	10.0	0.0	2.0	2	0	0	2	2	2	0	SWI2/SNF2	ATPase
Thymidylate_kin	PF02223.17	gi|288559422|ref|YP_003422908.1|	-	0.19	11.4	2.4	0.35	10.5	0.2	2.6	2	1	1	3	3	3	0	Thymidylate	kinase
Pribosyltran	PF00156.27	gi|288559423|ref|YP_003422909.1|	-	2.4e-17	62.9	2.0	3.3e-17	62.5	2.0	1.2	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
PRTase_2	PF15609.6	gi|288559423|ref|YP_003422909.1|	-	0.00099	18.7	0.1	0.0017	17.9	0.1	1.4	2	0	0	2	2	2	1	Phosphoribosyl	transferase
UPRTase	PF14681.6	gi|288559423|ref|YP_003422909.1|	-	0.0036	16.8	0.1	0.0051	16.3	0.1	1.2	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
UTRA	PF07702.13	gi|288559423|ref|YP_003422909.1|	-	0.081	12.8	0.0	0.15	11.9	0.0	1.4	1	0	0	1	1	1	0	UTRA	domain
Diphthamide_syn	PF01866.17	gi|288559424|ref|YP_003422910.1|	-	7.7e-93	311.3	0.0	9.6e-93	310.9	0.0	1.0	1	0	0	1	1	1	1	Putative	diphthamide	synthesis	protein
Nro1	PF12753.7	gi|288559424|ref|YP_003422910.1|	-	0.073	12.0	0.0	0.1	11.5	0.0	1.1	1	0	0	1	1	1	0	Nuclear	pore	complex	subunit	Nro1
Vpu	PF00558.19	gi|288559425|ref|YP_003422911.1|	-	0.26	11.1	0.1	0.26	11.1	0.1	2.2	3	0	0	3	3	3	0	Vpu	protein
AgrB	PF04647.15	gi|288559425|ref|YP_003422911.1|	-	0.56	9.5	16.0	0.14	11.5	1.6	2.3	2	1	0	2	2	2	0	Accessory	gene	regulator	B
DUF3810	PF12725.7	gi|288559425|ref|YP_003422911.1|	-	0.57	9.5	9.4	0.3	10.4	0.5	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3810)
EMP24_GP25L	PF01105.24	gi|288559425|ref|YP_003422911.1|	-	0.8	9.6	4.0	1.5	8.7	4.0	1.4	1	0	0	1	1	1	0	emp24/gp25L/p24	family/GOLD
HKR_ArcB_TM	PF18415.1	gi|288559425|ref|YP_003422911.1|	-	6.2	7.7	13.5	1.7	9.5	4.5	3.1	2	1	1	3	3	3	0	Histidine	kinase	receptor	ArcB	trans-membrane	domain
DHHC	PF01529.20	gi|288559425|ref|YP_003422911.1|	-	9.8	6.3	11.9	7.2	6.7	1.7	2.1	1	1	1	2	2	2	0	DHHC	palmitoyltransferase
ECR1_N	PF14382.6	gi|288559426|ref|YP_003422912.1|	-	3.8e-09	36.2	0.1	9.1e-09	35.0	0.0	1.7	2	0	0	2	2	2	1	Exosome	complex	exonuclease	RRP4	N-terminal	region
EXOSC1	PF10447.9	gi|288559426|ref|YP_003422912.1|	-	3.7e-05	24.3	0.1	0.0034	18.0	0.0	2.3	1	1	1	2	2	2	2	Exosome	component	EXOSC1/CSL4
S1	PF00575.23	gi|288559426|ref|YP_003422912.1|	-	0.017	15.4	2.0	11	6.5	0.0	3.3	3	0	0	3	3	3	0	S1	RNA	binding	domain
Enterotoxin_b	PF01376.18	gi|288559426|ref|YP_003422912.1|	-	0.02	15.1	0.0	0.049	13.8	0.0	1.6	1	1	1	2	2	2	0	Heat-labile	enterotoxin	beta	chain
A2L_zn_ribbon	PF08792.10	gi|288559426|ref|YP_003422912.1|	-	0.15	11.8	0.1	0.3	10.9	0.1	1.5	1	0	0	1	1	1	0	A2L	zinc	ribbon	domain
RNA_pol_L_2	PF13656.6	gi|288559427|ref|YP_003422913.1|	-	2e-21	75.5	0.0	2.5e-21	75.2	0.0	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
RNA_pol_L	PF01193.24	gi|288559427|ref|YP_003422913.1|	-	1.6e-06	27.4	0.0	3.5e-06	26.3	0.0	1.6	1	1	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
NUDIX	PF00293.28	gi|288559428|ref|YP_003422914.1|	-	3.7e-23	82.0	0.0	4.4e-23	81.7	0.0	1.0	1	0	0	1	1	1	1	NUDIX	domain
DUF2521	PF10730.9	gi|288559428|ref|YP_003422914.1|	-	0.091	12.8	0.0	0.13	12.3	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2521)
TFIIS_C	PF01096.18	gi|288559429|ref|YP_003422915.1|	-	6.5e-19	67.5	13.8	9e-18	63.8	2.2	3.3	3	0	0	3	3	3	2	Transcription	factor	S-II	(TFIIS)
RNA_POL_M_15KD	PF02150.16	gi|288559429|ref|YP_003422915.1|	-	2.8e-07	30.3	16.0	0.00043	20.1	1.9	4.1	3	2	0	3	3	3	2	RNA	polymerases	M/15	Kd	subunit
Zn_Tnp_IS1595	PF12760.7	gi|288559429|ref|YP_003422915.1|	-	0.00034	20.5	9.9	0.001	19.0	1.8	2.9	2	1	1	3	3	3	1	Transposase	zinc-ribbon	domain
HypA	PF01155.19	gi|288559429|ref|YP_003422915.1|	-	0.0023	17.9	0.8	0.0023	17.9	0.8	2.8	1	1	2	3	3	3	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zinc_ribbon_10	PF10058.9	gi|288559429|ref|YP_003422915.1|	-	0.017	14.9	10.7	0.99	9.2	1.4	3.6	3	1	0	3	3	3	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
Baculo_LEF5_C	PF11792.8	gi|288559429|ref|YP_003422915.1|	-	0.022	14.4	0.6	0.022	14.4	0.6	3.0	3	1	0	3	3	3	0	Baculoviridae	late	expression	factor	5	C-terminal	domain
Rpr2	PF04032.16	gi|288559429|ref|YP_003422915.1|	-	0.022	15.0	2.1	0.022	15.0	2.1	2.7	2	1	0	2	2	2	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
FdhE	PF04216.12	gi|288559429|ref|YP_003422915.1|	-	0.025	14.5	5.0	0.094	12.6	0.5	2.2	1	1	0	2	2	2	0	Protein	involved	in	formate	dehydrogenase	formation
zinc_ribbon_2	PF13240.6	gi|288559429|ref|YP_003422915.1|	-	0.027	14.2	15.3	1.7	8.5	0.3	4.4	4	0	0	4	4	4	0	zinc-ribbon	domain
PhnA_Zn_Ribbon	PF08274.12	gi|288559429|ref|YP_003422915.1|	-	0.036	14.0	12.7	1.4	8.9	0.0	4.1	4	0	0	4	4	4	0	PhnA	Zinc-Ribbon
zf-CHY	PF05495.12	gi|288559429|ref|YP_003422915.1|	-	0.051	14.1	11.3	1.7	9.2	7.9	3.1	1	1	1	2	2	2	0	CHY	zinc	finger
Fer4_10	PF13237.6	gi|288559429|ref|YP_003422915.1|	-	0.055	13.6	0.4	0.055	13.6	0.4	2.9	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
MMU163	PF17119.5	gi|288559429|ref|YP_003422915.1|	-	0.15	11.2	0.9	0.16	11.1	0.9	1.1	1	0	0	1	1	1	0	Mitochondrial	protein	up-regulated	during	meiosis
zf-RRPl_C4	PF17026.5	gi|288559429|ref|YP_003422915.1|	-	0.21	11.7	9.0	0.13	12.4	1.8	2.2	1	1	1	2	2	2	0	Putative	ribonucleoprotein	zinc-finger	pf	C4	type
TackOD1	PF18551.1	gi|288559429|ref|YP_003422915.1|	-	0.28	10.9	12.7	0.18	11.5	2.6	3.0	2	2	0	2	2	2	0	Thaumarchaeal	output	domain	1
DZR	PF12773.7	gi|288559429|ref|YP_003422915.1|	-	0.35	10.9	13.1	5.9	7.0	2.8	3.3	2	2	1	3	3	3	0	Double	zinc	ribbon
zf-IS66	PF13005.7	gi|288559429|ref|YP_003422915.1|	-	0.39	11.1	8.5	4.4	7.8	0.6	3.4	3	1	0	3	3	3	0	zinc-finger	binding	domain	of	transposase	IS66
Nudix_N_2	PF14803.6	gi|288559429|ref|YP_003422915.1|	-	0.51	10.3	10.2	3.8	7.5	0.4	4.0	3	1	1	4	4	4	0	Nudix	N-terminal
Zn-ribbon_8	PF09723.10	gi|288559429|ref|YP_003422915.1|	-	0.66	10.1	14.2	7.5	6.8	0.4	4.4	3	1	1	4	4	4	0	Zinc	ribbon	domain
Lar_restr_allev	PF14354.6	gi|288559429|ref|YP_003422915.1|	-	0.84	10.1	13.7	4.1	7.9	0.7	2.9	2	1	0	2	2	2	0	Restriction	alleviation	protein	Lar
Cytochrome_C7	PF14522.6	gi|288559429|ref|YP_003422915.1|	-	0.96	9.5	15.0	5e+02	0.8	15.0	2.5	1	1	0	1	1	1	0	Cytochrome	c7	and	related	cytochrome	c
zf-TFIIB	PF13453.6	gi|288559429|ref|YP_003422915.1|	-	1	8.7	9.9	9	5.7	0.1	3.4	3	1	0	3	3	3	0	Transcription	factor	zinc-finger
DUF2752	PF10825.8	gi|288559429|ref|YP_003422915.1|	-	1.2	9.2	4.4	1.9	8.6	0.0	2.7	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2752)
zf_UBZ	PF18439.1	gi|288559429|ref|YP_003422915.1|	-	1.5	8.5	10.8	12	5.6	0.4	3.9	4	0	0	4	4	4	0	Ubiquitin-Binding	Zinc	Finger
zf-RRN7	PF11781.8	gi|288559429|ref|YP_003422915.1|	-	1.6	8.5	7.0	31	4.4	1.1	3.4	3	0	0	3	3	3	0	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
Cytochrome_C554	PF13435.6	gi|288559429|ref|YP_003422915.1|	-	1.8	9.5	11.0	8.9	7.3	3.6	2.2	1	1	1	2	2	2	0	Cytochrome	c554	and	c-prime
Rubredoxin	PF00301.20	gi|288559429|ref|YP_003422915.1|	-	1.9	8.5	13.1	0.55	10.3	0.4	3.7	4	0	0	4	4	4	0	Rubredoxin
Anti-TRAP	PF15777.5	gi|288559429|ref|YP_003422915.1|	-	2.2	8.3	10.2	8.1	6.5	0.3	3.6	3	1	1	4	4	4	0	Tryptophan	RNA-binding	attenuator	protein	inhibitory	protein
zinc_ribbon_4	PF13717.6	gi|288559429|ref|YP_003422915.1|	-	2.4	8.2	14.9	4	7.4	1.2	4.3	4	0	0	4	4	4	0	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.11	gi|288559429|ref|YP_003422915.1|	-	2.6	8.0	13.6	1.3	9.0	2.8	2.9	2	2	0	2	2	2	0	Putative	transposase	DNA-binding	domain
Zn_Tnp_IS91	PF14319.6	gi|288559429|ref|YP_003422915.1|	-	3.9	7.6	13.1	18	5.5	1.7	3.9	1	1	2	3	3	3	0	Transposase	zinc-binding	domain
zinc-ribbons_6	PF07191.12	gi|288559429|ref|YP_003422915.1|	-	5.1	7.1	13.7	11	6.1	2.4	3.3	2	2	1	3	3	3	0	zinc-ribbons
zf-C4_Topoisom	PF01396.19	gi|288559429|ref|YP_003422915.1|	-	5.6	6.8	12.8	3.8	7.4	0.2	3.4	4	0	0	4	4	3	0	Topoisomerase	DNA	binding	C4	zinc	finger
Mut7-C	PF01927.16	gi|288559429|ref|YP_003422915.1|	-	8.1	6.5	15.0	1.1	9.3	5.2	2.5	1	1	0	2	2	2	0	Mut7-C	RNAse	domain
Sulfate_transp	PF00916.20	gi|288559430|ref|YP_003422916.1|	-	0.0054	15.5	1.1	0.0072	15.1	1.1	1.1	1	0	0	1	1	1	1	Sulfate	permease	family
Sensor_TM1	PF13755.6	gi|288559430|ref|YP_003422916.1|	-	0.036	13.8	0.3	0.036	13.8	0.3	1.7	2	0	0	2	2	2	0	Sensor	N-terminal	transmembrane	domain
Tetraspanin	PF00335.20	gi|288559430|ref|YP_003422916.1|	-	0.05	13.3	4.1	0.096	12.4	4.1	1.4	1	0	0	1	1	1	0	Tetraspanin	family
SLATT_6	PF18169.1	gi|288559430|ref|YP_003422916.1|	-	0.5	9.9	4.8	0.11	12.1	0.2	2.2	2	0	0	2	2	2	0	SMODS	and	SLOG-associating	2TM	effector	domain	6
DUF202	PF02656.15	gi|288559430|ref|YP_003422916.1|	-	1.2	9.6	4.2	2.5	8.6	4.3	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF202)
FtsX	PF02687.21	gi|288559430|ref|YP_003422916.1|	-	1.9	9.0	6.3	3.2	8.3	6.3	1.3	1	0	0	1	1	1	0	FtsX-like	permease	family
PCNA_N	PF00705.18	gi|288559431|ref|YP_003422917.1|	-	3.9e-22	78.3	0.8	3.9e-22	78.3	0.8	1.6	2	0	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	N-terminal	domain
Rad9	PF04139.13	gi|288559431|ref|YP_003422917.1|	-	9.3e-08	31.8	0.0	1.2e-07	31.5	0.0	1.1	1	0	0	1	1	1	1	Rad9
PCNA_C	PF02747.15	gi|288559431|ref|YP_003422917.1|	-	8.8e-07	29.1	0.0	2.3e-05	24.6	0.0	2.6	2	1	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	C-terminal	domain
Hus1	PF04005.12	gi|288559431|ref|YP_003422917.1|	-	0.022	13.9	0.0	0.031	13.4	0.0	1.3	1	0	0	1	1	1	0	Hus1-like	protein
Ribosomal_L44	PF00935.19	gi|288559433|ref|YP_003422919.1|	-	2.2e-25	88.9	3.9	3.3e-25	88.4	3.9	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L44
Zn-ribbon_8	PF09723.10	gi|288559433|ref|YP_003422919.1|	-	0.0014	18.7	2.0	1.2	9.3	0.1	2.4	2	0	0	2	2	2	2	Zinc	ribbon	domain
NOB1_Zn_bind	PF08772.11	gi|288559433|ref|YP_003422919.1|	-	0.0015	18.6	5.1	0.0037	17.4	0.6	2.1	1	1	1	2	2	2	1	Nin	one	binding	(NOB1)	Zn-ribbon	like
Rpr2	PF04032.16	gi|288559433|ref|YP_003422919.1|	-	0.0026	18.0	0.8	0.0038	17.5	0.8	1.3	1	0	0	1	1	1	1	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
Elf1	PF05129.13	gi|288559433|ref|YP_003422919.1|	-	0.021	14.9	0.7	3.7	7.7	0.2	2.1	2	0	0	2	2	2	0	Transcription	elongation	factor	Elf1	like
zf-Mss51	PF13824.6	gi|288559433|ref|YP_003422919.1|	-	0.027	14.5	1.1	0.048	13.8	1.1	1.4	1	1	0	1	1	1	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
Ribosomal_L33	PF00471.20	gi|288559433|ref|YP_003422919.1|	-	0.03	14.8	3.2	0.03	14.8	3.2	2.5	3	0	0	3	3	3	0	Ribosomal	protein	L33
zf-LITAF-like	PF10601.9	gi|288559433|ref|YP_003422919.1|	-	0.11	12.7	3.5	0.38	11.0	0.3	2.1	2	0	0	2	2	2	0	LITAF-like	zinc	ribbon	domain
Zn_Tnp_IS1595	PF12760.7	gi|288559433|ref|YP_003422919.1|	-	0.14	12.2	7.9	3	7.9	0.1	2.3	2	1	0	2	2	2	0	Transposase	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|288559433|ref|YP_003422919.1|	-	0.18	11.3	2.0	3.5	7.2	0.2	2.3	2	0	0	2	2	2	0	TFIIB	zinc-binding
zinc_ribbon_2	PF13240.6	gi|288559433|ref|YP_003422919.1|	-	0.33	10.7	5.9	4.5	7.1	0.3	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-ISL3	PF14690.6	gi|288559433|ref|YP_003422919.1|	-	0.69	10.6	9.1	1.9	9.2	2.6	2.3	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Rubredoxin_2	PF18073.1	gi|288559433|ref|YP_003422919.1|	-	1.3	8.8	5.9	1.2	8.9	0.3	2.3	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
Ribosomal_S27e	PF01667.17	gi|288559434|ref|YP_003422920.1|	-	2.3e-23	81.7	0.3	2.5e-23	81.5	0.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S27
zf-BED	PF02892.15	gi|288559434|ref|YP_003422920.1|	-	0.013	15.5	0.2	0.013	15.5	0.2	1.8	1	1	1	2	2	2	0	BED	zinc	finger
TF_Zn_Ribbon	PF08271.12	gi|288559434|ref|YP_003422920.1|	-	0.017	14.6	0.4	0.026	14.1	0.4	1.3	1	0	0	1	1	1	0	TFIIB	zinc-binding
zf-RanBP	PF00641.18	gi|288559434|ref|YP_003422920.1|	-	0.079	12.3	0.8	4.1	6.8	0.1	2.1	2	0	0	2	2	2	0	Zn-finger	in	Ran	binding	protein	and	others
DUF2197	PF09963.9	gi|288559434|ref|YP_003422920.1|	-	1.5	9.2	7.6	5.3	7.4	1.0	2.2	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2197)
EIF_2_alpha	PF07541.12	gi|288559435|ref|YP_003422921.1|	-	1.4e-25	89.6	0.2	3.2e-25	88.5	0.0	1.6	2	0	0	2	2	2	1	Eukaryotic	translation	initiation	factor	2	alpha	subunit
S1	PF00575.23	gi|288559435|ref|YP_003422921.1|	-	1.1e-10	41.7	0.1	2e-10	40.8	0.1	1.4	1	0	0	1	1	1	1	S1	RNA	binding	domain
Kri1	PF05178.12	gi|288559435|ref|YP_003422921.1|	-	0.083	13.5	1.9	0.15	12.6	1.9	1.4	1	0	0	1	1	1	0	KRI1-like	family
Nop10p	PF04135.12	gi|288559436|ref|YP_003422922.1|	-	8e-24	83.4	2.5	8.7e-24	83.3	2.5	1.0	1	0	0	1	1	1	1	Nucleolar	RNA-binding	protein,	Nop10p	family
DUF1272	PF06906.11	gi|288559436|ref|YP_003422922.1|	-	0.00035	20.6	1.2	0.00051	20.1	1.2	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1272)
RecR	PF02132.15	gi|288559436|ref|YP_003422922.1|	-	0.0025	17.3	0.3	0.0032	17.0	0.3	1.2	1	0	0	1	1	1	1	RecR	protein
zf-RRN7	PF11781.8	gi|288559436|ref|YP_003422922.1|	-	0.006	16.2	1.3	2.1	8.1	0.1	2.2	2	0	0	2	2	2	2	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
PolC_DP2	PF03833.13	gi|288559436|ref|YP_003422922.1|	-	0.0084	14.0	0.2	0.0084	14.0	0.2	1.0	1	0	0	1	1	1	1	DNA	polymerase	II	large	subunit	DP2
TF_Zn_Ribbon	PF08271.12	gi|288559436|ref|YP_003422922.1|	-	0.012	15.1	3.2	0.19	11.3	0.1	2.2	2	0	0	2	2	2	0	TFIIB	zinc-binding
zf-TFIIB	PF13453.6	gi|288559436|ref|YP_003422922.1|	-	0.019	14.3	3.5	0.75	9.2	0.3	2.2	1	1	1	2	2	2	0	Transcription	factor	zinc-finger
zf_Rg	PF17915.1	gi|288559436|ref|YP_003422922.1|	-	0.036	13.4	1.6	0.036	13.4	1.6	2.0	1	1	1	2	2	2	0	Reverse	gyrase	zinc	finger
Zn-ribbon_8	PF09723.10	gi|288559436|ref|YP_003422922.1|	-	0.17	12.1	5.8	9.6	6.4	5.8	2.2	1	1	0	1	1	1	0	Zinc	ribbon	domain
zf-ribbon_3	PF13248.6	gi|288559436|ref|YP_003422922.1|	-	0.22	11.0	8.4	4.1	6.9	8.4	2.1	1	1	0	1	1	1	0	zinc-ribbon	domain
DNA_ligase_ZBD	PF03119.16	gi|288559436|ref|YP_003422922.1|	-	0.24	11.5	5.1	3.8	7.6	0.3	2.2	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
PADR1	PF08063.12	gi|288559436|ref|YP_003422922.1|	-	0.43	10.4	5.2	3.9	7.3	0.3	2.2	1	1	1	2	2	2	0	PADR1	(NUC008)	domain
zf-IS66	PF13005.7	gi|288559436|ref|YP_003422922.1|	-	0.58	10.6	5.9	0.36	11.3	0.9	2.5	1	1	1	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
PhnA_Zn_Ribbon	PF08274.12	gi|288559436|ref|YP_003422922.1|	-	1.4	9.0	6.4	0.81	9.7	0.7	2.1	1	1	1	2	2	2	0	PhnA	Zinc-Ribbon
Zn_Tnp_IS1595	PF12760.7	gi|288559436|ref|YP_003422922.1|	-	1.4	8.9	5.7	0.38	10.8	0.2	2.1	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
Prim_Zn_Ribbon	PF08273.12	gi|288559436|ref|YP_003422922.1|	-	2.5	8.4	9.3	1.6	9.0	3.1	2.5	2	1	0	2	2	2	0	Zinc-binding	domain	of	primase-helicase
PAC2	PF09754.9	gi|288559437|ref|YP_003422923.1|	-	2.4e-51	174.8	0.0	2.8e-51	174.6	0.0	1.0	1	0	0	1	1	1	1	PAC2	family
MMR_HSR1_C	PF08438.10	gi|288559438|ref|YP_003422924.1|	-	3.4e-36	124.2	0.1	6.3e-36	123.4	0.1	1.4	1	0	0	1	1	1	1	GTPase	of	unknown	function	C-terminal
MMR_HSR1	PF01926.23	gi|288559438|ref|YP_003422924.1|	-	1e-21	77.2	0.0	3.1e-20	72.4	0.0	3.0	2	2	1	3	3	3	1	50S	ribosome-binding	GTPase
TGS	PF02824.21	gi|288559438|ref|YP_003422924.1|	-	1e-12	47.9	0.1	2.6e-12	46.6	0.1	1.7	1	0	0	1	1	1	1	TGS	domain
FeoB_N	PF02421.18	gi|288559438|ref|YP_003422924.1|	-	1.8e-08	34.1	0.2	7e-08	32.1	0.1	2.0	2	0	0	2	2	2	1	Ferrous	iron	transport	protein	B
MMR_HSR1_Xtn	PF16897.5	gi|288559438|ref|YP_003422924.1|	-	0.0083	16.1	0.0	0.021	14.9	0.0	1.7	1	0	0	1	1	1	1	C-terminal	region	of	MMR_HSR1	domain
YchF-GTPase_C	PF06071.13	gi|288559438|ref|YP_003422924.1|	-	0.019	15.1	0.4	0.53	10.5	0.0	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF933)
YnfE	PF17452.2	gi|288559438|ref|YP_003422924.1|	-	0.13	12.5	0.1	18	5.7	0.0	2.5	2	0	0	2	2	2	0	Uncharacterized	YnfE-like
Oxidored_nitro	PF00148.19	gi|288559439|ref|YP_003422925.1|	-	1.6e-23	83.1	0.1	3.9e-23	81.8	0.1	1.6	2	0	0	2	2	2	1	Nitrogenase	component	1	type	Oxidoreductase
TP_methylase	PF00590.20	gi|288559439|ref|YP_003422925.1|	-	0.11	12.5	0.1	0.22	11.4	0.1	1.5	1	0	0	1	1	1	0	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
EB_dh	PF09459.10	gi|288559439|ref|YP_003422925.1|	-	0.18	11.7	0.0	0.22	11.4	0.0	1.1	1	0	0	1	1	1	0	Ethylbenzene	dehydrogenase
Glyco_transf_4	PF13439.6	gi|288559439|ref|YP_003422925.1|	-	0.2	11.7	0.0	16	5.5	0.0	2.6	2	1	0	2	2	2	0	Glycosyltransferase	Family	4
GATase	PF00117.28	gi|288559440|ref|YP_003422926.1|	-	1e-20	74.3	0.0	1.2e-20	74.1	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
SNO	PF01174.19	gi|288559440|ref|YP_003422926.1|	-	8.4e-09	35.5	0.0	2.2e-08	34.2	0.0	1.6	1	1	0	1	1	1	1	SNO	glutamine	amidotransferase	family
Peptidase_C26	PF07722.13	gi|288559440|ref|YP_003422926.1|	-	0.0011	18.8	0.0	0.019	14.7	0.0	2.1	2	0	0	2	2	2	1	Peptidase	C26
GATase_3	PF07685.14	gi|288559440|ref|YP_003422926.1|	-	0.0013	18.4	0.0	0.0023	17.6	0.0	1.4	2	0	0	2	2	2	1	CobB/CobQ-like	glutamine	amidotransferase	domain
DJ-1_PfpI	PF01965.24	gi|288559440|ref|YP_003422926.1|	-	0.0036	17.1	0.0	0.0054	16.6	0.0	1.2	1	0	0	1	1	1	1	DJ-1/PfpI	family
Thioredoxin_2	PF13098.6	gi|288559441|ref|YP_003422927.1|	-	1e-15	58.1	0.0	1.4e-15	57.6	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin_7	PF13899.6	gi|288559441|ref|YP_003422927.1|	-	1.7e-09	37.7	0.0	2.8e-09	37.0	0.0	1.3	1	0	0	1	1	1	1	Thioredoxin-like
Thioredox_DsbH	PF03190.15	gi|288559441|ref|YP_003422927.1|	-	0.0016	18.4	0.0	0.0022	18.0	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF255
Thioredoxin	PF00085.20	gi|288559441|ref|YP_003422927.1|	-	0.0059	16.6	0.0	0.0093	15.9	0.0	1.3	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_3	PF13192.6	gi|288559441|ref|YP_003422927.1|	-	0.01	15.9	0.0	0.02	14.9	0.0	1.5	1	0	0	1	1	1	0	Thioredoxin	domain
Transposase_1	PF01359.18	gi|288559441|ref|YP_003422927.1|	-	0.088	12.7	0.0	0.18	11.7	0.0	1.4	1	0	0	1	1	1	0	Transposase	(partial	DDE	domain)
DsbD	PF02683.15	gi|288559442|ref|YP_003422928.1|	-	8.2e-12	45.5	28.4	1.4e-11	44.7	28.4	1.4	1	1	0	1	1	1	1	Cytochrome	C	biogenesis	protein	transmembrane	region
NifU_N	PF01592.16	gi|288559443|ref|YP_003422929.1|	-	0.00025	21.2	0.1	0.00044	20.4	0.1	1.3	1	0	0	1	1	1	1	NifU-like	N	terminal	domain
GGGtGRT	PF14057.6	gi|288559444|ref|YP_003422930.1|	-	4.7e-199	660.1	3.4	5.3e-199	659.9	3.4	1.0	1	0	0	1	1	1	1	GGGtGRT	protein
CstA	PF02554.14	gi|288559445|ref|YP_003422931.1|	-	2e-54	184.9	33.0	1.8e-35	122.6	2.5	3.2	2	1	1	3	3	3	2	Carbon	starvation	protein	CstA
CstA_5TM	PF13722.6	gi|288559445|ref|YP_003422931.1|	-	4.7e-14	52.7	3.7	4.7e-14	52.7	3.7	3.0	2	1	0	2	2	2	1	5TM	C-terminal	transporter	carbon	starvation	CstA
Phage_holin_2_4	PF16082.5	gi|288559445|ref|YP_003422931.1|	-	3.1	7.6	6.0	0.25	11.1	0.6	2.0	2	0	0	2	2	2	0	Bacteriophage	holin	family,	superfamily	II-like
Fer4	PF00037.27	gi|288559446|ref|YP_003422932.1|	-	2.5e-11	42.9	12.7	4.2e-09	35.8	3.3	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|288559446|ref|YP_003422932.1|	-	3.3e-11	43.2	21.8	5e-08	33.0	11.0	1.5	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|288559446|ref|YP_003422932.1|	-	3.5e-11	43.5	10.4	4.4e-08	33.6	0.7	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|288559446|ref|YP_003422932.1|	-	1.9e-09	37.5	21.7	6.6e-06	26.2	11.8	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|288559446|ref|YP_003422932.1|	-	3.1e-08	33.3	14.6	2.3e-07	30.6	2.8	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|288559446|ref|YP_003422932.1|	-	4.7e-08	33.0	10.5	7.2e-08	32.4	10.5	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|288559446|ref|YP_003422932.1|	-	6.4e-08	32.5	12.0	4.8e-05	23.5	2.6	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|288559446|ref|YP_003422932.1|	-	2.4e-07	30.4	12.7	4.6e-06	26.4	2.6	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|288559446|ref|YP_003422932.1|	-	3e-07	31.3	25.4	0.00064	20.6	2.7	2.3	2	1	1	3	3	3	3	4Fe-4S	double	cluster	binding	domain
Fer4_8	PF13183.6	gi|288559446|ref|YP_003422932.1|	-	7e-06	26.4	7.4	7.9e-05	23.0	0.6	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|288559446|ref|YP_003422932.1|	-	0.00012	22.8	0.6	0.00012	22.8	0.6	2.1	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|288559446|ref|YP_003422932.1|	-	0.00024	21.6	13.6	0.0011	19.5	3.1	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|288559446|ref|YP_003422932.1|	-	0.00056	20.6	0.2	0.00056	20.6	0.2	2.6	2	1	1	3	3	3	1	4Fe-4S	single	cluster	domain
Fer4_3	PF12798.7	gi|288559446|ref|YP_003422932.1|	-	0.0019	19.0	6.9	0.0019	19.0	6.9	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|288559446|ref|YP_003422932.1|	-	0.0028	17.8	10.7	0.0053	17.0	10.7	1.4	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|288559446|ref|YP_003422932.1|	-	0.0028	18.1	0.4	0.0028	18.1	0.4	2.8	3	0	0	3	3	3	1	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
ETF_QO	PF05187.13	gi|288559446|ref|YP_003422932.1|	-	0.072	13.2	9.1	0.58	10.3	1.8	2.1	1	1	1	2	2	2	0	Electron	transfer	flavoprotein-ubiquinone	oxidoreductase,	4Fe-4S
zf-C2H2_11	PF16622.5	gi|288559446|ref|YP_003422932.1|	-	3.9	7.3	10.0	7.2	6.5	0.7	2.3	2	0	0	2	2	2	0	zinc-finger	C2H2-type
NAD_kinase	PF01513.21	gi|288559447|ref|YP_003422933.1|	-	4e-47	160.8	1.2	4.7e-47	160.6	1.2	1.0	1	0	0	1	1	1	1	ATP-NAD	kinase
DAGK_cat	PF00781.24	gi|288559447|ref|YP_003422933.1|	-	0.019	14.6	0.0	0.032	13.8	0.0	1.4	1	0	0	1	1	1	0	Diacylglycerol	kinase	catalytic	domain
AIRS_C	PF02769.22	gi|288559448|ref|YP_003422934.1|	-	2.1e-17	63.7	0.1	4.9e-17	62.5	0.1	1.7	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.24	gi|288559448|ref|YP_003422934.1|	-	3.6e-07	30.7	0.5	1e-06	29.3	0.5	1.8	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
Putative_PNPOx	PF01243.20	gi|288559449|ref|YP_003422935.1|	-	1.7e-10	40.9	0.0	2.4e-10	40.4	0.0	1.2	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase
Pyrid_ox_like	PF16242.5	gi|288559449|ref|YP_003422935.1|	-	0.00085	18.9	0.0	0.00098	18.7	0.0	1.2	1	1	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase	like
Pyridox_ox_2	PF12900.7	gi|288559449|ref|YP_003422935.1|	-	0.046	13.7	0.0	0.062	13.3	0.0	1.3	1	0	0	1	1	1	0	Pyridoxamine	5'-phosphate	oxidase
DUF2518	PF10726.9	gi|288559451|ref|YP_003422937.1|	-	0.059	13.0	6.6	0.066	12.9	6.6	1.0	1	0	0	1	1	1	0	Protein	of	function	(DUF2518)
FTSW_RODA_SPOVE	PF01098.19	gi|288559451|ref|YP_003422937.1|	-	0.083	11.9	5.4	0.085	11.8	5.4	1.0	1	0	0	1	1	1	0	Cell	cycle	protein
Wzy_C	PF04932.15	gi|288559451|ref|YP_003422937.1|	-	1	8.9	6.1	1.2	8.8	6.1	1.0	1	0	0	1	1	1	0	O-Antigen	ligase
DUF4191	PF13829.6	gi|288559451|ref|YP_003422937.1|	-	5.8	6.2	6.6	6	6.1	6.6	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4191)
DUF2207	PF09972.9	gi|288559451|ref|YP_003422937.1|	-	8.9	4.9	10.0	9.7	4.8	10.0	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
HEAT_2	PF13646.6	gi|288559452|ref|YP_003422938.1|	-	3.4e-11	43.4	0.0	2.4e-06	27.8	0.0	3.1	1	1	2	3	3	3	3	HEAT	repeats
HEAT	PF02985.22	gi|288559452|ref|YP_003422938.1|	-	1.7e-08	34.0	0.1	0.15	12.4	0.0	4.8	5	0	0	5	5	5	2	HEAT	repeat
HEAT_EZ	PF13513.6	gi|288559452|ref|YP_003422938.1|	-	5.1e-08	33.2	0.0	0.00017	22.0	0.0	3.6	3	1	1	4	4	4	3	HEAT-like	repeat
Adaptin_N	PF01602.20	gi|288559452|ref|YP_003422938.1|	-	4e-06	25.7	0.0	0.0032	16.1	0.0	2.2	1	1	1	2	2	2	2	Adaptin	N	terminal	region
Cnd1	PF12717.7	gi|288559452|ref|YP_003422938.1|	-	5.7e-06	26.5	0.2	0.0005	20.1	0.0	2.7	1	1	1	2	2	2	1	non-SMC	mitotic	condensation	complex	subunit	1
Methyltransf_11	PF08241.12	gi|288559453|ref|YP_003422939.1|	-	3.9e-24	85.1	0.0	6.7e-24	84.4	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|288559453|ref|YP_003422939.1|	-	2.8e-20	72.8	0.0	4.6e-20	72.1	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|288559453|ref|YP_003422939.1|	-	3.7e-19	69.0	0.1	4.5e-19	68.7	0.1	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|288559453|ref|YP_003422939.1|	-	1.1e-12	48.6	0.0	1.8e-12	47.9	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|288559453|ref|YP_003422939.1|	-	2.2e-11	43.6	0.0	3.1e-11	43.0	0.0	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_23	PF13489.6	gi|288559453|ref|YP_003422939.1|	-	5.5e-11	42.6	0.0	7.4e-11	42.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.20	gi|288559453|ref|YP_003422939.1|	-	8.4e-09	35.1	0.0	1.2e-08	34.7	0.0	1.2	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_15	PF09445.10	gi|288559453|ref|YP_003422939.1|	-	3.9e-05	23.3	0.3	8.9e-05	22.1	0.1	1.7	2	0	0	2	2	2	1	RNA	cap	guanine-N2	methyltransferase
N6_N4_Mtase	PF01555.18	gi|288559453|ref|YP_003422939.1|	-	5.5e-05	23.0	0.7	0.0039	16.9	0.2	2.4	2	1	0	2	2	2	1	DNA	methylase
PrmA	PF06325.13	gi|288559453|ref|YP_003422939.1|	-	0.00014	21.4	0.0	0.0002	20.8	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
MTS	PF05175.14	gi|288559453|ref|YP_003422939.1|	-	0.00014	21.4	0.0	0.00034	20.2	0.0	1.5	2	0	0	2	2	2	1	Methyltransferase	small	domain
Methyltransf_9	PF08003.11	gi|288559453|ref|YP_003422939.1|	-	0.00016	20.8	0.0	0.00021	20.3	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1698)
RrnaAD	PF00398.20	gi|288559453|ref|YP_003422939.1|	-	0.00024	20.3	0.0	0.00097	18.3	0.0	1.8	2	0	0	2	2	2	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_8	PF05148.15	gi|288559453|ref|YP_003422939.1|	-	0.00033	20.6	0.0	0.0023	17.8	0.0	2.1	2	1	0	2	2	2	1	Hypothetical	methyltransferase
NodS	PF05401.11	gi|288559453|ref|YP_003422939.1|	-	0.0015	18.2	0.0	0.0022	17.6	0.0	1.1	1	0	0	1	1	1	1	Nodulation	protein	S	(NodS)
MetW	PF07021.12	gi|288559453|ref|YP_003422939.1|	-	0.0027	17.3	0.0	0.0041	16.7	0.0	1.3	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
PCMT	PF01135.19	gi|288559453|ref|YP_003422939.1|	-	0.0065	16.2	0.0	0.01	15.6	0.0	1.3	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
TPMT	PF05724.11	gi|288559453|ref|YP_003422939.1|	-	0.0086	15.8	0.0	0.016	14.9	0.0	1.5	1	1	0	1	1	1	1	Thiopurine	S-methyltransferase	(TPMT)
Methyltransf_32	PF13679.6	gi|288559453|ref|YP_003422939.1|	-	0.15	12.0	0.0	0.22	11.5	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
IreB	PF06135.12	gi|288559454|ref|YP_003422940.1|	-	0.0052	17.0	0.9	0.72	10.1	0.1	2.2	1	1	1	2	2	2	2	IreB	regulatory	phosphoprotein
TruD	PF01142.18	gi|288559455|ref|YP_003422941.1|	-	4.8e-156	519.7	1.2	5.5e-156	519.6	1.2	1.0	1	0	0	1	1	1	1	tRNA	pseudouridine	synthase	D	(TruD)
SIMPL	PF04402.14	gi|288559455|ref|YP_003422941.1|	-	0.079	13.4	0.3	0.24	11.8	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF541)
SpoU_sub_bind	PF08032.12	gi|288559455|ref|YP_003422941.1|	-	0.3	11.4	1.6	1.7	9.0	0.1	2.8	3	0	0	3	3	3	0	RNA	2'-O	ribose	methyltransferase	substrate	binding
Transp_cyt_pur	PF02133.15	gi|288559456|ref|YP_003422942.1|	-	7.2e-08	31.6	42.4	1.2e-07	30.9	42.3	1.4	1	1	0	1	1	1	1	Permease	for	cytosine/purines,	uracil,	thiamine,	allantoin
Tweety	PF04906.13	gi|288559456|ref|YP_003422942.1|	-	0.0046	15.7	5.3	0.012	14.3	5.3	1.6	1	0	0	1	1	1	1	Tweety
Phos_pyr_kin	PF08543.12	gi|288559457|ref|YP_003422943.1|	-	4.2e-19	68.9	0.0	6.5e-19	68.3	0.0	1.3	1	1	0	1	1	1	1	Phosphomethylpyrimidine	kinase
PfkB	PF00294.24	gi|288559457|ref|YP_003422943.1|	-	2.4e-05	23.8	0.0	3.5e-05	23.3	0.0	1.2	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Carb_kinase	PF01256.17	gi|288559457|ref|YP_003422943.1|	-	0.02	14.3	0.0	0.029	13.9	0.0	1.1	1	0	0	1	1	1	0	Carbohydrate	kinase
BPD_transp_1	PF00528.22	gi|288559458|ref|YP_003422944.1|	-	2.5e-25	89.3	17.7	3.1e-25	89.0	17.7	1.1	1	0	0	1	1	1	1	Binding-protein-dependent	transport	system	inner	membrane	component
DUF3149	PF11346.8	gi|288559458|ref|YP_003422944.1|	-	0.61	9.8	10.7	13	5.5	0.1	3.9	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF3149)
LapA_dom	PF06305.11	gi|288559458|ref|YP_003422944.1|	-	0.7	9.7	6.2	0.26	11.1	1.0	2.8	3	0	0	3	3	3	0	Lipopolysaccharide	assembly	protein	A	domain
SBP_bac_11	PF13531.6	gi|288559459|ref|YP_003422945.1|	-	1.5e-50	172.1	0.3	1.9e-50	171.8	0.3	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_1	PF01547.25	gi|288559459|ref|YP_003422945.1|	-	2.9e-19	70.2	5.2	4.7e-19	69.5	5.2	1.3	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_8	PF13416.6	gi|288559459|ref|YP_003422945.1|	-	5e-09	36.4	3.3	0.00013	21.9	0.9	2.2	1	1	1	2	2	2	2	Bacterial	extracellular	solute-binding	protein
PBP_like_2	PF12849.7	gi|288559459|ref|YP_003422945.1|	-	4.1e-08	33.3	0.7	4.1e-06	26.7	0.1	2.1	1	1	0	2	2	2	2	PBP	superfamily	domain
PBP_like	PF12727.7	gi|288559459|ref|YP_003422945.1|	-	0.013	14.6	0.1	0.022	13.9	0.1	1.5	1	1	0	1	1	1	0	PBP	superfamily	domain
LysR_substrate	PF03466.20	gi|288559459|ref|YP_003422945.1|	-	0.029	13.7	0.0	0.14	11.5	0.0	2.3	1	1	0	1	1	1	0	LysR	substrate	binding	domain
SBP_bac_3	PF00497.20	gi|288559459|ref|YP_003422945.1|	-	0.033	13.6	0.4	0.059	12.8	0.3	1.6	1	1	1	2	2	2	0	Bacterial	extracellular	solute-binding	proteins,	family	3
DUF126	PF01989.16	gi|288559460|ref|YP_003422946.1|	-	2.9e-38	129.5	1.1	2.9e-38	129.5	0.4	1.4	2	0	0	2	2	2	1	Aconitase	X	swivel	domain
DDR_swiveling	PF18427.1	gi|288559460|ref|YP_003422946.1|	-	0.016	15.3	0.3	0.018	15.0	0.3	1.1	1	0	0	1	1	1	0	DD-reactivating	factor	swiveling	domain
Amidohydro_1	PF01979.20	gi|288559461|ref|YP_003422947.1|	-	8.1e-44	150.3	0.2	9.6e-44	150.1	0.2	1.0	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.11	gi|288559461|ref|YP_003422947.1|	-	5.9e-11	42.5	0.0	0.00012	21.7	0.0	2.7	2	1	0	2	2	2	2	Amidohydrolase	family
Bac_DNA_binding	PF00216.21	gi|288559462|ref|YP_003422948.1|	-	0.00042	20.5	0.4	0.76	10.0	0.1	2.1	2	0	0	2	2	2	2	Bacterial	DNA-binding	protein
PRODH	PF18327.1	gi|288559462|ref|YP_003422948.1|	-	0.0082	16.3	0.0	1	9.6	0.0	2.1	2	0	0	2	2	2	2	Proline	utilization	A	proline	dehydrogenase	N-terminal	domain
Ykof	PF07615.11	gi|288559462|ref|YP_003422948.1|	-	0.041	14.4	0.1	0.05	14.1	0.1	1.3	1	0	0	1	1	1	0	YKOF-related	Family
SATase_N	PF06426.14	gi|288559462|ref|YP_003422948.1|	-	0.078	13.4	0.0	0.087	13.2	0.0	1.1	1	0	0	1	1	1	0	Serine	acetyltransferase,	N-terminal
DSBA	PF01323.20	gi|288559462|ref|YP_003422948.1|	-	0.13	12.0	0.1	0.16	11.7	0.1	1.1	1	0	0	1	1	1	0	DSBA-like	thioredoxin	domain
HMA	PF00403.26	gi|288559463|ref|YP_003422949.1|	-	5.7e-16	58.7	0.2	6.2e-16	58.6	0.2	1.0	1	0	0	1	1	1	1	Heavy-metal-associated	domain
TusA	PF01206.17	gi|288559463|ref|YP_003422949.1|	-	0.0044	16.8	0.1	0.0044	16.8	0.1	1.4	1	1	0	1	1	1	1	Sulfurtransferase	TusA
E1-E2_ATPase	PF00122.20	gi|288559464|ref|YP_003422950.1|	-	1.3e-54	184.5	0.7	1.3e-54	184.5	0.7	3.4	3	1	0	3	3	3	1	E1-E2	ATPase
Hydrolase	PF00702.26	gi|288559464|ref|YP_003422950.1|	-	1.3e-41	143.2	2.2	2.3e-41	142.4	2.2	1.4	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HMA	PF00403.26	gi|288559464|ref|YP_003422950.1|	-	2.6e-29	101.5	1.6	3.2e-14	53.1	0.1	3.0	2	0	0	2	2	2	2	Heavy-metal-associated	domain
Hydrolase_3	PF08282.12	gi|288559464|ref|YP_003422950.1|	-	7.3e-10	39.0	5.0	1.4e-06	28.3	0.4	3.2	3	0	0	3	3	3	2	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.7	gi|288559464|ref|YP_003422950.1|	-	0.0012	19.3	0.0	0.0055	17.1	0.0	2.0	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
DUF2938	PF11158.8	gi|288559464|ref|YP_003422950.1|	-	0.023	14.2	0.2	0.059	12.8	0.2	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2938)
HydF_tetramer	PF18133.1	gi|288559464|ref|YP_003422950.1|	-	0.12	12.1	0.5	0.31	10.8	0.1	1.9	1	1	0	1	1	1	0	Hydrogen	maturase	F	tetramerization	domain
Hydrolase_6	PF13344.6	gi|288559464|ref|YP_003422950.1|	-	0.17	12.0	0.7	1.6	8.9	0.0	2.9	3	1	0	3	3	3	0	Haloacid	dehalogenase-like	hydrolase
DUF2207	PF09972.9	gi|288559464|ref|YP_003422950.1|	-	0.3	9.8	4.6	7.1	5.3	0.1	3.1	3	0	0	3	3	3	0	Predicted	membrane	protein	(DUF2207)
TrkH	PF02386.16	gi|288559465|ref|YP_003422951.1|	-	5.9e-49	166.8	27.1	2.8e-25	88.7	9.9	2.2	1	1	1	2	2	2	2	Cation	transport	protein
PspB	PF06667.12	gi|288559465|ref|YP_003422951.1|	-	0.55	10.3	6.2	14	5.9	0.3	3.7	2	1	0	2	2	2	0	Phage	shock	protein	B
Chorismate_bind	PF00425.18	gi|288559466|ref|YP_003422952.1|	-	3.2e-94	315.3	0.0	3.4e-93	311.9	0.0	2.0	2	0	0	2	2	2	1	chorismate	binding	enzyme
Anth_synt_I_N	PF04715.13	gi|288559466|ref|YP_003422952.1|	-	1.3e-31	109.7	0.1	1.3e-30	106.5	0.1	2.2	2	0	0	2	2	2	1	Anthranilate	synthase	component	I,	N	terminal	region
PMBR	PF09373.10	gi|288559466|ref|YP_003422952.1|	-	0.19	11.9	0.6	1	9.6	0.1	2.6	2	0	0	2	2	2	0	Pseudomurein-binding	repeat
GATase	PF00117.28	gi|288559467|ref|YP_003422953.1|	-	1.3e-48	165.4	0.1	2e-47	161.4	0.1	1.9	1	1	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.13	gi|288559467|ref|YP_003422953.1|	-	2.1e-14	53.8	0.0	3.5e-14	53.1	0.0	1.3	1	0	0	1	1	1	1	Peptidase	C26
SNO	PF01174.19	gi|288559467|ref|YP_003422953.1|	-	0.00064	19.6	0.2	0.0049	16.7	0.2	2.1	1	1	0	1	1	1	1	SNO	glutamine	amidotransferase	family
GATase_3	PF07685.14	gi|288559467|ref|YP_003422953.1|	-	0.12	12.0	0.0	0.22	11.1	0.0	1.6	1	0	0	1	1	1	0	CobB/CobQ-like	glutamine	amidotransferase	domain
Glycos_transf_3	PF00591.21	gi|288559468|ref|YP_003422954.1|	-	2.3e-97	325.6	0.7	2.3e-97	325.6	0.7	1.7	2	0	0	2	2	2	1	Glycosyl	transferase	family,	a/b	domain
Glycos_trans_3N	PF02885.17	gi|288559468|ref|YP_003422954.1|	-	7.4e-20	70.6	3.3	1.4e-19	69.6	3.3	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family,	helical	bundle	domain
IGPS	PF00218.21	gi|288559469|ref|YP_003422955.1|	-	6.1e-89	297.5	5.2	6.8e-89	297.4	5.2	1.0	1	0	0	1	1	1	1	Indole-3-glycerol	phosphate	synthase
NanE	PF04131.14	gi|288559469|ref|YP_003422955.1|	-	0.00077	18.7	0.7	0.027	13.6	0.2	2.6	1	1	1	2	2	2	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
His_biosynth	PF00977.21	gi|288559469|ref|YP_003422955.1|	-	0.0087	15.5	0.0	0.25	10.8	0.0	2.5	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
QRPTase_C	PF01729.19	gi|288559469|ref|YP_003422955.1|	-	0.034	13.9	0.4	0.068	12.9	0.4	1.5	1	0	0	1	1	1	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
DUF1843	PF08898.10	gi|288559469|ref|YP_003422955.1|	-	2.4	8.7	6.6	1.1	9.9	3.8	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1843)
PRAI	PF00697.22	gi|288559470|ref|YP_003422956.1|	-	1.4e-44	152.2	0.1	1.8e-44	151.8	0.1	1.2	1	0	0	1	1	1	1	N-(5'phosphoribosyl)anthranilate	(PRA)	isomerase
BtpA	PF03437.15	gi|288559470|ref|YP_003422956.1|	-	0.014	14.9	0.0	0.019	14.4	0.0	1.2	1	0	0	1	1	1	0	BtpA	family
PALP	PF00291.25	gi|288559471|ref|YP_003422957.1|	-	3.5e-44	151.4	0.6	4.3e-44	151.1	0.6	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
Trp_syntA	PF00290.20	gi|288559472|ref|YP_003422958.1|	-	9.4e-93	309.8	0.8	1.2e-92	309.5	0.8	1.0	1	0	0	1	1	1	1	Tryptophan	synthase	alpha	chain
His_biosynth	PF00977.21	gi|288559472|ref|YP_003422958.1|	-	9.3e-05	22.0	1.0	0.00014	21.4	0.3	1.6	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
PcrB	PF01884.17	gi|288559472|ref|YP_003422958.1|	-	0.0002	20.9	0.8	0.002	17.7	0.4	2.4	2	1	0	2	2	2	1	PcrB	family
BtpA	PF03437.15	gi|288559472|ref|YP_003422958.1|	-	0.00034	20.1	0.8	0.0018	17.8	0.3	2.0	2	0	0	2	2	2	1	BtpA	family
Radical_SAM	PF04055.21	gi|288559472|ref|YP_003422958.1|	-	0.0015	18.9	0.0	0.086	13.2	0.0	2.6	1	1	1	2	2	2	2	Radical	SAM	superfamily
Glyco_tran_WecB	PF03808.13	gi|288559472|ref|YP_003422958.1|	-	0.03	14.3	0.0	0.92	9.4	0.0	2.2	1	1	1	2	2	2	0	Glycosyl	transferase	WecB/TagA/CpsF	family
DUF1722	PF08349.11	gi|288559472|ref|YP_003422958.1|	-	0.14	12.4	0.0	0.71	10.2	0.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1722)
MFS_1	PF07690.16	gi|288559473|ref|YP_003422959.1|	-	2e-54	184.9	55.1	8.7e-39	133.4	23.3	2.1	1	1	0	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.24	gi|288559473|ref|YP_003422959.1|	-	4.5e-18	65.4	41.6	4.7e-17	62.0	15.0	3.1	2	1	1	3	3	3	2	Sugar	(and	other)	transporter
TM140	PF14985.6	gi|288559473|ref|YP_003422959.1|	-	5.8	6.4	11.3	0.43	10.1	0.8	3.1	3	0	0	3	3	3	0	TM140	protein	family
MatE	PF01554.18	gi|288559474|ref|YP_003422960.1|	-	4.6e-50	169.4	36.1	9.3e-33	113.2	11.9	2.9	4	0	0	4	4	4	2	MatE
Polysacc_synt_C	PF14667.6	gi|288559474|ref|YP_003422960.1|	-	2.7e-07	30.7	11.9	2.7e-07	30.7	11.9	5.1	4	1	1	5	5	5	3	Polysaccharide	biosynthesis	C-terminal	domain
MarR	PF01047.22	gi|288559475|ref|YP_003422961.1|	-	9.8e-13	47.8	0.1	1.7e-12	47.1	0.1	1.3	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.7	gi|288559475|ref|YP_003422961.1|	-	2.6e-09	36.8	0.0	4.1e-09	36.2	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.6	gi|288559475|ref|YP_003422961.1|	-	1.9e-07	30.5	0.0	4.7e-07	29.3	0.0	1.7	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_36	PF13730.6	gi|288559475|ref|YP_003422961.1|	-	3.7e-06	26.8	0.0	7.4e-06	25.8	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.19	gi|288559475|ref|YP_003422961.1|	-	5.9e-06	26.1	0.1	1e-05	25.3	0.1	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_34	PF13601.6	gi|288559475|ref|YP_003422961.1|	-	1.1e-05	25.5	0.3	2.5e-05	24.4	0.3	1.6	1	1	1	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_Crp_2	PF13545.6	gi|288559475|ref|YP_003422961.1|	-	1.9e-05	24.6	0.0	3e-05	23.9	0.0	1.4	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_27	PF13463.6	gi|288559475|ref|YP_003422961.1|	-	1.9e-05	25.0	0.2	3.4e-05	24.2	0.2	1.6	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
GntR	PF00392.21	gi|288559475|ref|YP_003422961.1|	-	3.6e-05	23.3	0.0	8.6e-05	22.1	0.0	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HxlR	PF01638.17	gi|288559475|ref|YP_003422961.1|	-	0.00013	21.7	0.1	0.00023	20.9	0.1	1.4	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
Fe_dep_repress	PF01325.19	gi|288559475|ref|YP_003422961.1|	-	0.00015	21.9	0.0	0.00032	20.8	0.0	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_5	PF01022.20	gi|288559475|ref|YP_003422961.1|	-	0.0004	20.2	0.0	0.0011	18.8	0.0	1.8	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
Replic_Relax	PF13814.6	gi|288559475|ref|YP_003422961.1|	-	0.0008	19.5	0.1	0.0011	19.0	0.1	1.3	1	0	0	1	1	1	1	Replication-relaxation
B-block_TFIIIC	PF04182.12	gi|288559475|ref|YP_003422961.1|	-	0.00091	19.3	0.1	0.0016	18.5	0.1	1.4	1	0	0	1	1	1	1	B-block	binding	subunit	of	TFIIIC
HTH_41	PF14502.6	gi|288559475|ref|YP_003422961.1|	-	0.0017	18.0	0.0	0.0036	17.0	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
PadR	PF03551.14	gi|288559475|ref|YP_003422961.1|	-	0.0019	18.1	0.2	0.0032	17.4	0.2	1.4	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_11	PF08279.12	gi|288559475|ref|YP_003422961.1|	-	0.0019	18.1	0.1	0.0039	17.1	0.1	1.5	1	0	0	1	1	1	1	HTH	domain
HTH_DeoR	PF08220.12	gi|288559475|ref|YP_003422961.1|	-	0.0029	17.3	0.0	0.0058	16.4	0.0	1.5	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
HTH_Tnp_4	PF13613.6	gi|288559475|ref|YP_003422961.1|	-	0.0045	16.7	0.0	0.014	15.1	0.0	1.8	2	0	0	2	2	2	1	Helix-turn-helix	of	DDE	superfamily	endonuclease
HTH_38	PF13936.6	gi|288559475|ref|YP_003422961.1|	-	0.0052	16.5	0.7	0.093	12.5	0.0	2.8	2	1	1	3	3	3	1	Helix-turn-helix	domain
DUF4364	PF14277.6	gi|288559475|ref|YP_003422961.1|	-	0.0057	16.4	1.7	0.0088	15.8	1.4	1.6	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
DUF3116	PF11313.8	gi|288559475|ref|YP_003422961.1|	-	0.011	15.6	0.9	0.015	15.1	0.3	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3116)
RNA_pol_Rpc34	PF05158.12	gi|288559475|ref|YP_003422961.1|	-	0.02	14.3	0.2	0.025	13.9	0.2	1.1	1	0	0	1	1	1	0	RNA	polymerase	Rpc34	subunit
HTH_IclR	PF09339.10	gi|288559475|ref|YP_003422961.1|	-	0.022	14.5	0.0	0.057	13.2	0.0	1.7	2	0	0	2	2	1	0	IclR	helix-turn-helix	domain
NAT	PF04768.13	gi|288559475|ref|YP_003422961.1|	-	0.024	14.3	0.4	0.027	14.2	0.4	1.1	1	0	0	1	1	1	0	NAT,	N-acetyltransferase,	of	N-acetylglutamate	synthase
HTH_19	PF12844.7	gi|288559475|ref|YP_003422961.1|	-	0.036	14.1	1.3	0.16	12.0	1.3	2.3	1	1	0	1	1	1	0	Helix-turn-helix	domain
FeoC	PF09012.10	gi|288559475|ref|YP_003422961.1|	-	0.05	13.7	0.0	0.085	12.9	0.0	1.3	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
LexA_DNA_bind	PF01726.16	gi|288559475|ref|YP_003422961.1|	-	0.074	12.8	0.0	0.16	11.8	0.0	1.5	1	0	0	1	1	1	0	LexA	DNA	binding	domain
HTH_20	PF12840.7	gi|288559475|ref|YP_003422961.1|	-	0.093	12.8	0.0	0.2	11.7	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
UDG	PF03167.19	gi|288559476|ref|YP_003422962.1|	-	6.5e-28	97.7	0.0	8.5e-28	97.3	0.0	1.1	1	0	0	1	1	1	1	Uracil	DNA	glycosylase	superfamily
CBP_BcsQ	PF06564.12	gi|288559476|ref|YP_003422962.1|	-	0.13	11.8	0.0	0.14	11.6	0.0	1.2	1	0	0	1	1	1	0	Cellulose	biosynthesis	protein	BcsQ
FMN_red	PF03358.15	gi|288559477|ref|YP_003422963.1|	-	1.8e-23	83.0	0.0	2.6e-23	82.5	0.0	1.2	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.17	gi|288559477|ref|YP_003422963.1|	-	1.3e-14	54.4	0.0	1.7e-14	54.0	0.0	1.2	1	0	0	1	1	1	1	Flavodoxin-like	fold
BBP2	PF07642.11	gi|288559477|ref|YP_003422963.1|	-	0.0008	18.7	0.2	0.0011	18.2	0.2	1.1	1	0	0	1	1	1	1	Putative	beta-barrel	porin-2,	OmpL-like.	bbp2
Flavodoxin_5	PF12724.7	gi|288559477|ref|YP_003422963.1|	-	0.03	14.6	0.1	0.062	13.5	0.1	1.6	1	1	0	1	1	1	0	Flavodoxin	domain
TetR_N	PF00440.23	gi|288559478|ref|YP_003422964.1|	-	5.1e-14	51.8	0.0	2e-13	49.9	0.0	2.1	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	tetR	family
Acetyltransf_1	PF00583.25	gi|288559478|ref|YP_003422964.1|	-	1.4e-12	47.9	0.1	3.2e-12	46.7	0.1	1.7	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.7	gi|288559478|ref|YP_003422964.1|	-	1.2e-08	35.3	0.1	2.9e-08	34.0	0.1	1.7	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.7	gi|288559478|ref|YP_003422964.1|	-	2.6e-06	27.6	1.4	4.1e-05	23.7	0.1	2.9	2	1	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.7	gi|288559478|ref|YP_003422964.1|	-	0.0011	18.9	0.1	0.0096	15.9	0.1	2.5	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
HTH_Tnp_1_2	PF13022.6	gi|288559478|ref|YP_003422964.1|	-	0.013	15.6	0.7	0.035	14.2	0.1	2.1	2	0	0	2	2	2	0	Helix-turn-helix	of	insertion	element	transposase
CTP_transf_like	PF01467.26	gi|288559478|ref|YP_003422964.1|	-	0.053	13.7	0.1	1.2	9.3	0.0	2.6	2	1	0	2	2	2	0	Cytidylyltransferase-like
HTH_40	PF14493.6	gi|288559478|ref|YP_003422964.1|	-	0.059	13.8	0.3	0.27	11.7	0.0	2.3	2	0	0	2	2	1	0	Helix-turn-helix	domain
Fzo_mitofusin	PF04799.13	gi|288559478|ref|YP_003422964.1|	-	0.076	12.6	0.2	0.17	11.4	0.1	1.6	2	0	0	2	2	2	0	fzo-like	conserved	region
Acetyltransf_CG	PF14542.6	gi|288559478|ref|YP_003422964.1|	-	0.12	12.5	0.0	0.3	11.2	0.0	1.6	1	0	0	1	1	1	0	GCN5-related	N-acetyl-transferase
HTH_38	PF13936.6	gi|288559478|ref|YP_003422964.1|	-	0.13	12.1	0.1	0.31	10.8	0.1	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.12	gi|288559478|ref|YP_003422964.1|	-	0.14	11.8	0.4	0.34	10.6	0.1	1.7	2	0	0	2	2	2	0	Sigma-70,	region	4
Fic	PF02661.18	gi|288559479|ref|YP_003422965.1|	-	1.2e-24	87.0	0.0	4.1e-24	85.3	0.0	1.9	2	0	0	2	2	2	1	Fic/DOC	family
HTH_24	PF13412.6	gi|288559479|ref|YP_003422965.1|	-	4.5e-11	42.1	0.6	1.2e-10	40.7	0.6	1.8	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
FaeA	PF04703.12	gi|288559479|ref|YP_003422965.1|	-	0.00068	20.0	0.0	0.0018	18.6	0.0	1.7	1	0	0	1	1	1	1	FaeA-like	protein
Penicillinase_R	PF03965.16	gi|288559479|ref|YP_003422965.1|	-	0.0019	18.5	0.7	0.0071	16.7	0.1	2.2	2	0	0	2	2	2	1	Penicillinase	repressor
HTH_45	PF14947.6	gi|288559479|ref|YP_003422965.1|	-	0.0033	17.4	3.0	0.0068	16.4	0.4	2.6	2	0	0	2	2	2	1	Winged	helix-turn-helix
SMC_ScpB	PF04079.16	gi|288559479|ref|YP_003422965.1|	-	0.0042	16.7	0.1	0.011	15.3	0.0	1.8	2	0	0	2	2	2	1	Segregation	and	condensation	complex	subunit	ScpB
Fic_N	PF13784.6	gi|288559479|ref|YP_003422965.1|	-	0.057	13.5	0.1	0.16	12.0	0.1	1.7	1	0	0	1	1	1	0	Fic/DOC	family	N-terminal
DUF2250	PF10007.9	gi|288559479|ref|YP_003422965.1|	-	0.061	13.4	1.6	0.45	10.7	0.2	2.4	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_27	PF13463.6	gi|288559479|ref|YP_003422965.1|	-	0.073	13.6	0.0	0.16	12.5	0.0	1.6	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
TrmB	PF01978.19	gi|288559479|ref|YP_003422965.1|	-	0.1	12.5	0.7	0.26	11.2	0.1	2.1	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
PCI	PF01399.27	gi|288559479|ref|YP_003422965.1|	-	0.24	11.9	5.3	0.48	10.9	0.6	2.6	2	1	0	2	2	2	0	PCI	domain
Peptidase_C1	PF00112.23	gi|288559480|ref|YP_003422966.1|	-	8.4e-15	55.4	0.5	9.5e-14	52.0	0.0	2.8	3	0	0	3	3	3	1	Papain	family	cysteine	protease
Big_1	PF02369.16	gi|288559480|ref|YP_003422966.1|	-	8e-14	51.4	6.6	2.6e-09	36.9	3.2	2.8	2	0	0	2	2	2	2	Bacterial	Ig-like	domain	(group	1)
Lectin_like	PF18560.1	gi|288559480|ref|YP_003422966.1|	-	4.7e-12	46.3	6.6	4.7e-12	46.3	6.6	3.6	2	1	0	2	2	2	1	Lectin	like	domain
Big_3_5	PF16640.5	gi|288559480|ref|YP_003422966.1|	-	3.8e-11	43.0	20.4	5.7e-09	36.0	6.9	4.1	4	0	0	4	4	4	2	Bacterial	Ig-like	domain	(group	3)
Invasin_D3	PF09134.10	gi|288559480|ref|YP_003422966.1|	-	7.1e-10	39.1	9.4	1.1e-06	28.9	3.5	3.0	2	0	0	2	2	2	2	Invasin,	domain	3
CarboxypepD_reg	PF13620.6	gi|288559480|ref|YP_003422966.1|	-	5e-05	23.5	6.0	0.0033	17.7	1.6	2.7	2	0	0	2	2	2	2	Carboxypeptidase	regulatory-like	domain
Pilin	PF00114.19	gi|288559480|ref|YP_003422966.1|	-	0.046	14.6	1.8	0.37	11.7	1.8	2.7	1	1	0	1	1	1	0	Pilin	(bacterial	filament)
Ac76	PF05814.11	gi|288559480|ref|YP_003422966.1|	-	0.047	13.7	3.5	0.11	12.5	3.5	1.6	1	0	0	1	1	1	0	Orf76	(Ac76)
YtkA	PF13115.6	gi|288559480|ref|YP_003422966.1|	-	0.13	12.9	0.4	0.78	10.4	0.1	2.3	2	0	0	2	2	2	0	YtkA-like
Pentapeptide_4	PF13599.6	gi|288559480|ref|YP_003422966.1|	-	0.52	10.5	15.7	0.35	11.1	2.5	5.3	2	1	2	4	4	4	0	Pentapeptide	repeats	(9	copies)
DUF1624	PF07786.12	gi|288559481|ref|YP_003422967.1|	-	8.3e-16	58.2	20.2	1.7e-15	57.2	20.2	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1624)
Acyl_transf_3	PF01757.22	gi|288559481|ref|YP_003422967.1|	-	2.2e-09	36.8	45.5	3.3e-09	36.3	45.5	1.2	1	0	0	1	1	1	1	Acyltransferase	family
Phage_holin_4_2	PF04020.13	gi|288559482|ref|YP_003422968.1|	-	7.9e-08	32.9	13.7	1.2e-07	32.4	13.1	1.6	2	0	0	2	2	2	1	Mycobacterial	4	TMS	phage	holin,	superfamily	IV
DUF4013	PF13197.6	gi|288559483|ref|YP_003422969.1|	-	2.4e-18	66.5	26.9	2.4e-18	66.5	26.9	2.7	1	1	2	3	3	3	2	Protein	of	unknown	function	(DUF4013)
Calcyon	PF06387.11	gi|288559483|ref|YP_003422969.1|	-	0.44	10.5	1.8	0.84	9.6	1.8	1.4	1	0	0	1	1	1	0	D1	dopamine	receptor-interacting	protein	(calcyon)
TatD_DNase	PF01026.21	gi|288559484|ref|YP_003422970.1|	-	1.4e-68	231.1	0.3	1.6e-68	230.9	0.3	1.0	1	0	0	1	1	1	1	TatD	related	DNase
Amidohydro_1	PF01979.20	gi|288559484|ref|YP_003422970.1|	-	0.00018	21.0	0.0	0.076	12.3	0.0	3.2	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_2	PF04909.14	gi|288559484|ref|YP_003422970.1|	-	0.0016	18.3	0.1	0.65	9.7	0.0	3.3	1	1	1	3	3	3	1	Amidohydrolase
Cellulase	PF00150.18	gi|288559484|ref|YP_003422970.1|	-	0.0067	15.9	0.5	8.8	5.7	0.1	3.1	1	1	2	3	3	3	2	Cellulase	(glycosyl	hydrolase	family	5)
Hpr_kinase_N	PF02603.16	gi|288559484|ref|YP_003422970.1|	-	0.024	14.7	0.1	2.7	8.1	0.0	2.6	2	0	0	2	2	2	0	HPr	Serine	kinase	N	terminus
UPF0158	PF03682.13	gi|288559484|ref|YP_003422970.1|	-	0.057	13.4	1.1	0.07	13.1	0.2	1.6	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0158)
Epimerase_2	PF02350.19	gi|288559484|ref|YP_003422970.1|	-	0.086	11.7	0.2	0.23	10.3	0.1	1.7	1	1	1	2	2	2	0	UDP-N-acetylglucosamine	2-epimerase
GST_N_3	PF13417.6	gi|288559484|ref|YP_003422970.1|	-	0.13	12.7	0.0	0.4	11.1	0.0	1.8	2	0	0	2	2	2	0	Glutathione	S-transferase,	N-terminal	domain
SpoU_sub_bind	PF08032.12	gi|288559484|ref|YP_003422970.1|	-	0.26	11.6	3.3	0.88	9.9	0.1	2.9	3	0	0	3	3	3	0	RNA	2'-O	ribose	methyltransferase	substrate	binding
IF2_N	PF04760.15	gi|288559484|ref|YP_003422970.1|	-	0.82	9.5	9.0	2.4	8.0	1.0	3.7	3	1	1	4	4	4	0	Translation	initiation	factor	IF-2,	N-terminal	region
DUF104	PF01954.16	gi|288559484|ref|YP_003422970.1|	-	0.92	10.0	6.1	5.3	7.6	0.0	3.2	4	0	0	4	4	4	0	Protein	of	unknown	function	DUF104
TPR_8	PF13181.6	gi|288559484|ref|YP_003422970.1|	-	2	8.8	11.6	2.1	8.8	0.2	4.3	5	0	0	5	5	5	0	Tetratricopeptide	repeat
ThiF	PF00899.21	gi|288559485|ref|YP_003422971.1|	-	1.1e-38	133.0	1.4	1.3e-38	132.8	1.4	1.0	1	0	0	1	1	1	1	ThiF	family
Sacchrp_dh_NADP	PF03435.18	gi|288559485|ref|YP_003422971.1|	-	0.013	15.7	0.2	0.027	14.7	0.2	1.5	1	0	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
UDPG_MGDP_dh_N	PF03721.14	gi|288559485|ref|YP_003422971.1|	-	0.029	14.0	1.7	0.074	12.6	1.7	1.9	1	1	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Stap_Strp_toxin	PF01123.20	gi|288559485|ref|YP_003422971.1|	-	2.7	8.9	5.7	3.3	8.6	1.5	2.7	3	0	0	3	3	3	0	Staphylococcal/Streptococcal	toxin,	OB-fold	domain
Pyridox_ox_2	PF12900.7	gi|288559486|ref|YP_003422972.1|	-	1e-19	70.9	0.0	1.2e-19	70.7	0.0	1.0	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase
Putative_PNPOx	PF01243.20	gi|288559486|ref|YP_003422972.1|	-	5e-08	33.0	0.0	6.7e-08	32.6	0.0	1.2	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase
Pyrid_ox_like	PF16242.5	gi|288559486|ref|YP_003422972.1|	-	9.7e-05	22.0	0.0	0.00012	21.6	0.0	1.2	1	0	0	1	1	1	1	Pyridoxamine	5'-phosphate	oxidase	like
Lyase_1	PF00206.20	gi|288559487|ref|YP_003422973.1|	-	1.4e-57	195.5	0.2	2.1e-57	194.9	0.2	1.2	1	0	0	1	1	1	1	Lyase
ADSL_C	PF10397.9	gi|288559487|ref|YP_003422973.1|	-	4e-20	72.1	0.1	1e-18	67.6	0.0	2.6	2	0	0	2	2	2	1	Adenylosuccinate	lyase	C-terminus
ABC_transp_aux	PF09822.9	gi|288559487|ref|YP_003422973.1|	-	0.045	13.2	0.1	0.061	12.8	0.1	1.3	1	0	0	1	1	1	0	ABC-type	uncharacterized	transport	system
CDC13_N	PF16853.5	gi|288559487|ref|YP_003422973.1|	-	0.097	12.2	2.1	2.2	7.8	1.2	2.5	1	1	1	2	2	2	0	Cell	division	control	protein	13	N-terminus
CPBP	PF02517.16	gi|288559488|ref|YP_003422974.1|	-	1.9e-20	73.1	7.2	1.9e-20	73.1	7.2	2.7	3	1	0	3	3	3	1	CPBP	intramembrane	metalloprotease
CPBP	PF02517.16	gi|288559489|ref|YP_003422975.1|	-	4.4e-18	65.4	4.0	4.4e-18	65.4	4.0	3.4	3	1	0	3	3	3	1	CPBP	intramembrane	metalloprotease
SafA	PF17073.5	gi|288559489|ref|YP_003422975.1|	-	0.00046	20.1	0.1	0.00046	20.1	0.1	3.0	3	0	0	3	3	3	2	Two-component-system	connector	protein
HTH_3	PF01381.22	gi|288559490|ref|YP_003422976.1|	-	7.1e-15	54.8	0.3	1e-14	54.3	0.3	1.2	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.7	gi|288559490|ref|YP_003422976.1|	-	1.8e-08	34.2	0.2	2.4e-08	33.9	0.2	1.3	1	1	0	1	1	1	1	Helix-turn-helix	domain
HTH_31	PF13560.6	gi|288559490|ref|YP_003422976.1|	-	5e-08	33.2	0.0	5.5e-08	33.0	0.0	1.3	1	1	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.6	gi|288559490|ref|YP_003422976.1|	-	0.00019	20.9	0.1	0.00034	20.1	0.1	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_Crp_2	PF13545.6	gi|288559490|ref|YP_003422976.1|	-	0.00044	20.2	0.1	0.00083	19.3	0.1	1.4	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_25	PF13413.6	gi|288559490|ref|YP_003422976.1|	-	0.00053	19.8	0.0	0.00085	19.1	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_AsnC-type	PF13404.6	gi|288559490|ref|YP_003422976.1|	-	0.0022	17.8	0.0	0.0036	17.1	0.0	1.3	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_26	PF13443.6	gi|288559490|ref|YP_003422976.1|	-	0.0029	18.0	0.1	0.0051	17.2	0.1	1.4	1	0	0	1	1	1	1	Cro/C1-type	HTH	DNA-binding	domain
HTH_11	PF08279.12	gi|288559490|ref|YP_003422976.1|	-	0.0046	16.9	0.1	0.007	16.3	0.1	1.3	1	0	0	1	1	1	1	HTH	domain
HTH_37	PF13744.6	gi|288559490|ref|YP_003422976.1|	-	0.008	16.1	0.1	0.013	15.4	0.1	1.4	1	1	0	1	1	1	1	Helix-turn-helix	domain
Sigma70_r4	PF04545.16	gi|288559490|ref|YP_003422976.1|	-	0.017	14.6	0.1	0.025	14.1	0.1	1.3	1	0	0	1	1	1	0	Sigma-70,	region	4
YdaS_antitoxin	PF15943.5	gi|288559490|ref|YP_003422976.1|	-	0.026	14.4	0.0	0.031	14.1	0.0	1.2	1	0	0	1	1	1	0	Putative	antitoxin	of	bacterial	toxin-antitoxin	system,	YdaS/YdaT
Crp	PF00325.20	gi|288559490|ref|YP_003422976.1|	-	0.03	14.0	0.0	0.056	13.1	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	crp	family
HTH_DeoR	PF08220.12	gi|288559490|ref|YP_003422976.1|	-	0.032	14.0	0.1	0.069	12.9	0.1	1.5	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
Flavi_propep	PF01570.17	gi|288559490|ref|YP_003422976.1|	-	0.041	13.8	0.0	0.048	13.6	0.0	1.1	1	0	0	1	1	1	0	Flavivirus	polyprotein	propeptide
LacI	PF00356.21	gi|288559490|ref|YP_003422976.1|	-	0.051	13.4	0.1	0.14	12.0	0.1	1.8	1	1	1	2	2	2	0	Bacterial	regulatory	proteins,	lacI	family
HTH_38	PF13936.6	gi|288559490|ref|YP_003422976.1|	-	0.052	13.3	0.4	0.12	12.1	0.1	1.7	3	0	0	3	3	3	0	Helix-turn-helix	domain
MarR_2	PF12802.7	gi|288559490|ref|YP_003422976.1|	-	0.11	12.5	0.2	0.74	9.7	0.0	1.9	2	0	0	2	2	2	0	MarR	family
MarR	PF01047.22	gi|288559490|ref|YP_003422976.1|	-	0.12	12.4	0.2	0.19	11.7	0.1	1.4	2	0	0	2	2	1	0	MarR	family
DUF4013	PF13197.6	gi|288559491|ref|YP_003422977.1|	-	5.7e-26	91.3	20.7	5.7e-26	91.3	20.7	2.0	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF4013)
DUF4013	PF13197.6	gi|288559492|ref|YP_003422978.1|	-	1.5e-30	106.2	29.7	1.5e-30	106.2	29.7	3.0	2	1	1	3	3	3	2	Protein	of	unknown	function	(DUF4013)
SSP160	PF06933.11	gi|288559492|ref|YP_003422978.1|	-	4.5	5.3	10.3	7	4.7	10.3	1.2	1	0	0	1	1	1	0	Special	lobe-specific	silk	protein	SSP160
CPBP	PF02517.16	gi|288559495|ref|YP_003422981.1|	-	4.8e-18	65.3	6.0	4.8e-18	65.3	6.0	3.1	2	1	1	3	3	3	1	CPBP	intramembrane	metalloprotease
Peptidase_M50	PF02163.22	gi|288559496|ref|YP_003422982.1|	-	2.8e-06	26.8	15.1	0.00013	21.4	0.5	3.2	1	1	1	2	2	2	2	Peptidase	family	M50
P22_AR_C	PF10548.9	gi|288559496|ref|YP_003422982.1|	-	0.04	14.1	0.1	0.18	12.0	0.2	2.0	2	0	0	2	2	2	0	P22AR	C-terminal	domain
Reprolysin_3	PF13582.6	gi|288559496|ref|YP_003422982.1|	-	0.11	13.0	0.1	0.16	12.5	0.1	1.3	1	0	0	1	1	1	0	Metallo-peptidase	family	M12B	Reprolysin-like
Sec61_beta	PF03911.16	gi|288559497|ref|YP_003422983.1|	-	1.1e-15	57.3	0.2	1.3e-15	57.2	0.2	1.1	1	0	0	1	1	1	1	Sec61beta	family
PolC_DP2	PF03833.13	gi|288559498|ref|YP_003422984.1|	-	0	1194.8	0.0	0	1192.5	0.0	1.9	1	1	0	1	1	1	1	DNA	polymerase	II	large	subunit	DP2
zf-ribbon_3	PF13248.6	gi|288559498|ref|YP_003422984.1|	-	0.00034	19.9	1.4	0.88	9.1	0.1	2.7	2	0	0	2	2	2	2	zinc-ribbon	domain
Yqai	PF09466.10	gi|288559498|ref|YP_003422984.1|	-	0.00071	19.8	0.5	0.00071	19.8	0.5	2.1	2	0	0	2	2	1	1	Hypothetical	protein	Yqai
Ogr_Delta	PF04606.12	gi|288559498|ref|YP_003422984.1|	-	0.0039	17.1	7.5	0.75	9.8	0.2	3.4	2	1	1	3	3	3	2	Ogr/Delta-like	zinc	finger
zinc_ribbon_2	PF13240.6	gi|288559498|ref|YP_003422984.1|	-	0.1	12.3	4.6	6.8	6.5	0.7	2.7	2	0	0	2	2	2	0	zinc-ribbon	domain
Zn-ribbon_8	PF09723.10	gi|288559498|ref|YP_003422984.1|	-	0.22	11.6	5.7	1.1	9.4	0.2	2.6	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-NADH-PPase	PF09297.11	gi|288559498|ref|YP_003422984.1|	-	0.3	10.8	8.3	0.83	9.4	0.3	3.3	3	0	0	3	3	3	0	NADH	pyrophosphatase	zinc	ribbon	domain
zinc_ribbon_4	PF13717.6	gi|288559498|ref|YP_003422984.1|	-	0.33	10.9	4.0	0.69	9.9	0.7	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
Zn_ribbon_recom	PF13408.6	gi|288559498|ref|YP_003422984.1|	-	0.57	10.7	5.1	49	4.5	4.3	3.1	2	1	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
Zn_Tnp_IS1595	PF12760.7	gi|288559498|ref|YP_003422984.1|	-	2.4	8.2	6.7	38	4.4	0.1	2.8	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
DNA_ligase_ZBD	PF03119.16	gi|288559498|ref|YP_003422984.1|	-	4.5	7.4	5.2	71	3.6	0.1	3.4	3	0	0	3	3	3	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
IBR	PF01485.21	gi|288559498|ref|YP_003422984.1|	-	5.3	7.3	5.8	12	6.2	0.4	2.6	2	0	0	2	2	2	0	IBR	domain,	a	half	RING-finger	domain
Prok-RING_1	PF14446.6	gi|288559498|ref|YP_003422984.1|	-	7.2	6.6	9.2	9.5	6.2	0.5	3.3	3	0	0	3	3	3	0	Prokaryotic	RING	finger	family	1
DUF35_N	PF12172.8	gi|288559498|ref|YP_003422984.1|	-	7.7	6.5	6.1	7.8	6.5	0.7	2.8	3	0	0	3	3	3	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
NRDD	PF13597.6	gi|288559499|ref|YP_003422985.1|	-	3.4e-166	554.3	0.1	5.3e-166	553.7	0.1	1.3	1	0	0	1	1	1	1	Anaerobic	ribonucleoside-triphosphate	reductase
ATP-cone	PF03477.16	gi|288559499|ref|YP_003422985.1|	-	1.7e-12	47.8	1.8	1e-05	26.0	0.3	2.9	1	1	1	2	2	2	2	ATP	cone	domain
DZR	PF12773.7	gi|288559499|ref|YP_003422985.1|	-	0.022	14.8	0.3	0.058	13.4	0.3	1.7	1	0	0	1	1	1	0	Double	zinc	ribbon
zf-P11	PF03854.14	gi|288559499|ref|YP_003422985.1|	-	0.044	13.5	1.0	0.14	11.9	1.0	1.8	1	0	0	1	1	1	0	P-11	zinc	finger
zf-ribbon_3	PF13248.6	gi|288559499|ref|YP_003422985.1|	-	0.083	12.3	1.3	0.16	11.4	1.3	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
FAD_SOX	PF18371.1	gi|288559499|ref|YP_003422985.1|	-	0.14	12.6	0.1	0.4	11.1	0.1	1.8	1	0	0	1	1	1	0	Flavin	adenine	dinucleotide	(FAD)-dependent	sulfhydryl	oxidase
tRNA-synt_1f	PF01921.18	gi|288559500|ref|YP_003422986.1|	-	6.7e-125	416.7	0.0	9.3e-125	416.3	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(K)
tRNA-synt_1g	PF09334.11	gi|288559500|ref|YP_003422986.1|	-	1.9e-06	26.9	0.0	6.7e-05	21.8	0.0	2.2	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(M)
tRNA-synt_1e	PF01406.19	gi|288559500|ref|YP_003422986.1|	-	0.044	13.1	0.0	0.5	9.7	0.0	2.4	3	0	0	3	3	3	0	tRNA	synthetases	class	I	(C)	catalytic	domain
DUF4407	PF14362.6	gi|288559501|ref|YP_003422987.1|	-	0.00019	20.9	38.6	0.055	12.8	24.1	3.0	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4407)
Bacillus_HBL	PF05791.11	gi|288559501|ref|YP_003422987.1|	-	0.00025	20.9	33.4	0.016	15.1	4.9	4.5	2	2	1	4	4	4	3	Bacillus	haemolytic	enterotoxin	(HBL)
FAM76	PF16046.5	gi|288559501|ref|YP_003422987.1|	-	0.00043	19.8	45.1	0.034	13.5	9.0	3.3	1	1	1	3	3	3	3	FAM76	protein
Spc7	PF08317.11	gi|288559501|ref|YP_003422987.1|	-	0.00051	19.0	57.2	0.011	14.7	13.0	3.5	1	1	3	4	4	4	2	Spc7	kinetochore	protein
DUF1664	PF07889.12	gi|288559501|ref|YP_003422987.1|	-	0.00058	19.9	29.7	0.036	14.1	2.9	3.6	2	2	2	4	4	4	2	Protein	of	unknown	function	(DUF1664)
UPF0242	PF06785.11	gi|288559501|ref|YP_003422987.1|	-	0.00087	19.4	54.8	0.0053	16.9	10.1	3.3	2	2	1	3	3	3	2	Uncharacterised	protein	family	(UPF0242)	N-terminus
CENP-F_leu_zip	PF10473.9	gi|288559501|ref|YP_003422987.1|	-	0.0011	19.0	9.8	0.0011	19.0	9.8	3.2	1	1	2	3	3	3	2	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
DUF3552	PF12072.8	gi|288559501|ref|YP_003422987.1|	-	0.0016	17.9	58.8	0.011	15.2	19.5	3.1	1	1	2	3	3	3	2	Domain	of	unknown	function	(DUF3552)
DUF812	PF05667.11	gi|288559501|ref|YP_003422987.1|	-	0.002	17.1	44.7	0.21	10.4	30.2	2.6	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF812)
OmpH	PF03938.14	gi|288559501|ref|YP_003422987.1|	-	0.0029	18.0	11.1	0.0029	18.0	11.1	3.7	1	1	3	4	4	4	2	Outer	membrane	protein	(OmpH-like)
DUF5082	PF16888.5	gi|288559501|ref|YP_003422987.1|	-	0.0031	17.8	40.9	0.0053	17.0	7.8	4.9	1	1	4	5	5	5	2	Domain	of	unknown	function	(DUF5082)
ABC_tran_CTD	PF16326.5	gi|288559501|ref|YP_003422987.1|	-	0.0033	17.7	5.8	0.0033	17.7	5.8	5.5	1	1	5	6	6	4	2	ABC	transporter	C-terminal	domain
DUF4200	PF13863.6	gi|288559501|ref|YP_003422987.1|	-	0.0036	17.7	15.5	0.0036	17.7	15.5	4.9	1	1	3	4	4	3	1	Domain	of	unknown	function	(DUF4200)
Pox_Ag35	PF03286.14	gi|288559501|ref|YP_003422987.1|	-	0.0068	16.2	1.3	0.0068	16.2	1.3	3.3	2	1	1	3	3	1	1	Pox	virus	Ag35	surface	protein
Fez1	PF06818.15	gi|288559501|ref|YP_003422987.1|	-	0.0069	16.9	44.4	0.018	15.5	19.2	2.5	1	1	1	2	2	2	2	Fez1
TPR_MLP1_2	PF07926.12	gi|288559501|ref|YP_003422987.1|	-	0.019	15.0	11.1	0.019	15.0	11.1	4.0	1	1	3	4	4	3	0	TPR/MLP1/MLP2-like	protein
DUF1878	PF08963.10	gi|288559501|ref|YP_003422987.1|	-	0.028	14.9	0.3	0.028	14.9	0.3	3.2	3	1	1	4	4	3	0	Protein	of	unknown	function	(DUF1878)
DUF1729	PF08354.10	gi|288559501|ref|YP_003422987.1|	-	0.029	13.3	10.4	0.32	9.8	0.2	2.7	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF1729)
HIP1_clath_bdg	PF16515.5	gi|288559501|ref|YP_003422987.1|	-	0.04	14.5	42.3	0.56	10.9	6.0	4.2	2	1	3	5	5	5	0	Clathrin-binding	domain	of	Huntingtin-interacting	protein	1
Exonuc_VII_L	PF02601.15	gi|288559501|ref|YP_003422987.1|	-	0.073	12.6	28.3	3.7e+03	-2.8	28.5	2.5	1	1	0	1	1	0	0	Exonuclease	VII,	large	subunit
Baculo_PEP_C	PF04513.12	gi|288559501|ref|YP_003422987.1|	-	0.078	13.0	22.6	65	3.5	15.7	4.0	1	1	1	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Death	PF00531.22	gi|288559501|ref|YP_003422987.1|	-	0.094	12.9	4.4	0.097	12.8	0.5	2.7	2	1	0	2	2	2	0	Death	domain
DUF1949	PF09186.11	gi|288559501|ref|YP_003422987.1|	-	0.1	12.5	2.1	14	5.7	0.1	3.7	4	0	0	4	4	3	0	Domain	of	unknown	function	(DUF1949)
HMMR_N	PF15905.5	gi|288559501|ref|YP_003422987.1|	-	0.23	10.9	56.7	0.11	11.9	17.8	3.1	1	1	2	3	3	3	0	Hyaluronan	mediated	motility	receptor	N-terminal
SKA1	PF07160.12	gi|288559501|ref|YP_003422987.1|	-	0.28	11.0	35.8	0.31	10.9	9.3	3.2	1	1	2	3	3	3	0	Spindle	and	kinetochore-associated	protein	1
USP8_interact	PF08941.10	gi|288559501|ref|YP_003422987.1|	-	0.28	11.0	17.0	0.15	11.9	0.4	3.4	2	1	1	3	3	3	0	USP8	interacting
AAA_13	PF13166.6	gi|288559501|ref|YP_003422987.1|	-	0.34	9.5	48.0	0.023	13.4	32.2	2.1	1	1	1	2	2	2	0	AAA	domain
Tektin	PF03148.14	gi|288559501|ref|YP_003422987.1|	-	0.52	9.0	37.7	0.85	8.3	7.3	4.2	2	2	1	3	3	3	0	Tektin	family
HrpB7	PF09486.10	gi|288559501|ref|YP_003422987.1|	-	0.57	10.6	24.4	2	8.8	7.6	4.0	1	1	1	3	3	2	0	Bacterial	type	III	secretion	protein	(HrpB7)
DUF4201	PF13870.6	gi|288559501|ref|YP_003422987.1|	-	0.58	9.9	47.5	0.038	13.7	5.7	4.2	2	2	2	4	4	4	0	Domain	of	unknown	function	(DUF4201)
DUF3450	PF11932.8	gi|288559501|ref|YP_003422987.1|	-	1	8.6	36.1	0.16	11.2	7.3	3.2	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF3450)
Filament	PF00038.21	gi|288559501|ref|YP_003422987.1|	-	1.1	8.8	41.0	0.52	9.8	35.7	2.9	1	1	1	2	2	2	0	Intermediate	filament	protein
ATG16	PF08614.11	gi|288559501|ref|YP_003422987.1|	-	1.2	9.3	51.6	11	6.2	11.8	4.1	1	1	3	4	4	4	0	Autophagy	protein	16	(ATG16)
SlyX	PF04102.12	gi|288559501|ref|YP_003422987.1|	-	1.4	9.6	27.4	0.98	10.1	2.2	5.8	1	1	4	5	5	5	0	SlyX
LPP	PF04728.13	gi|288559501|ref|YP_003422987.1|	-	1.5	9.2	25.5	0.52	10.7	3.2	5.4	4	1	0	4	4	4	0	Lipoprotein	leucine-zipper
ADIP	PF11559.8	gi|288559501|ref|YP_003422987.1|	-	1.8	8.6	50.5	0.56	10.3	6.6	4.5	1	1	3	4	4	4	0	Afadin-	and	alpha	-actinin-Binding
SHE3	PF17078.5	gi|288559501|ref|YP_003422987.1|	-	1.9	8.2	47.7	0.76	9.4	10.2	3.5	1	1	2	3	3	3	0	SWI5-dependent	HO	expression	protein	3
CC2-LZ	PF16516.5	gi|288559501|ref|YP_003422987.1|	-	1.9	8.9	49.7	0.45	10.9	4.2	5.6	1	1	5	6	6	6	0	Leucine	zipper	of	domain	CC2	of	NEMO,	NF-kappa-B	essential	modulator
DUF745	PF05335.13	gi|288559501|ref|YP_003422987.1|	-	2	8.1	34.6	1.2	8.8	9.2	3.0	1	1	1	3	3	3	0	Protein	of	unknown	function	(DUF745)
DUF1192	PF06698.11	gi|288559501|ref|YP_003422987.1|	-	2.2	8.4	31.0	0.59	10.2	0.4	6.2	4	3	2	6	6	6	0	Protein	of	unknown	function	(DUF1192)
Noelin-1	PF12308.8	gi|288559501|ref|YP_003422987.1|	-	2.3	8.3	14.7	3.5	7.7	0.5	3.3	3	0	0	3	3	3	0	Neurogenesis	glycoprotein
TMPIT	PF07851.13	gi|288559501|ref|YP_003422987.1|	-	2.3	7.4	39.1	0.92	8.7	6.9	3.1	1	1	2	3	3	3	0	TMPIT-like	protein
PRKG1_interact	PF15898.5	gi|288559501|ref|YP_003422987.1|	-	2.4	9.1	43.3	0.38	11.7	7.4	4.3	1	1	2	3	3	2	0	cGMP-dependent	protein	kinase	interacting	domain
Golgin_A5	PF09787.9	gi|288559501|ref|YP_003422987.1|	-	2.6	7.4	46.7	2.4	7.5	21.4	3.2	1	1	2	3	3	3	0	Golgin	subfamily	A	member	5
Cluap1	PF10234.9	gi|288559501|ref|YP_003422987.1|	-	3.6	6.9	38.0	0.063	12.7	6.5	3.5	1	1	1	2	2	1	0	Clusterin-associated	protein-1
Laminin_II	PF06009.12	gi|288559501|ref|YP_003422987.1|	-	3.8	7.5	32.9	0.12	12.3	5.2	3.5	3	1	0	3	3	3	0	Laminin	Domain	II
ING	PF12998.7	gi|288559501|ref|YP_003422987.1|	-	4.2	8.0	31.0	34	5.1	5.6	4.6	1	1	1	3	3	3	0	Inhibitor	of	growth	proteins	N-terminal	histone-binding
HemX	PF04375.14	gi|288559501|ref|YP_003422987.1|	-	5.3	6.2	31.2	1.4	8.1	5.6	3.3	1	1	1	3	3	3	0	HemX,	putative	uroporphyrinogen-III	C-methyltransferase
Atg14	PF10186.9	gi|288559501|ref|YP_003422987.1|	-	6.7	5.7	44.9	2.5	7.1	9.6	3.2	1	1	2	3	3	3	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
3-PAP	PF12578.8	gi|288559501|ref|YP_003422987.1|	-	6.9	6.4	7.4	12	5.7	0.0	3.8	4	1	0	4	4	4	0	Myotubularin-associated	protein
APG17	PF04108.12	gi|288559501|ref|YP_003422987.1|	-	7.1	5.6	32.8	1.9e+02	1.0	32.8	2.5	1	1	0	1	1	1	0	Autophagy	protein	Apg17
PKcGMP_CC	PF16808.5	gi|288559501|ref|YP_003422987.1|	-	8	6.4	37.2	11	6.0	1.7	7.6	7	2	1	8	8	7	0	Coiled-coil	N-terminus	of	cGMP-dependent	protein	kinase
DUF3378	PF11858.8	gi|288559501|ref|YP_003422987.1|	-	8.5	6.6	7.9	17	5.6	0.1	4.0	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF3378)
DUF2964	PF11177.8	gi|288559502|ref|YP_003422988.1|	-	0.0043	17.2	4.0	1.2	9.4	0.3	2.3	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF2964)
Big_1	PF02369.16	gi|288559503|ref|YP_003422989.1|	-	7.8e-14	51.4	26.8	4.9e-06	26.5	2.0	5.2	5	0	0	5	5	5	3	Bacterial	Ig-like	domain	(group	1)
Big_3_5	PF16640.5	gi|288559503|ref|YP_003422989.1|	-	1.4e-13	50.9	42.8	1.1e-09	38.3	6.0	5.8	5	1	0	6	6	6	3	Bacterial	Ig-like	domain	(group	3)
CarboxypepD_reg	PF13620.6	gi|288559503|ref|YP_003422989.1|	-	2.4e-11	43.7	10.9	0.0016	18.7	1.2	3.9	3	0	0	3	3	3	3	Carboxypeptidase	regulatory-like	domain
MG4	PF17789.1	gi|288559503|ref|YP_003422989.1|	-	3.9e-08	33.3	16.6	0.0071	16.5	0.4	4.9	4	1	0	4	4	4	3	Macroglobulin	domain	MG4
Invasin_D3	PF09134.10	gi|288559503|ref|YP_003422989.1|	-	5.6e-05	23.4	44.7	0.017	15.4	0.9	5.8	4	1	2	6	6	6	3	Invasin,	domain	3
DUF4399	PF14347.6	gi|288559503|ref|YP_003422989.1|	-	0.00052	20.3	0.3	15	6.0	0.0	3.9	3	1	0	3	3	3	2	Domain	of	unknown	function	(DUF4399)
MG2	PF01835.19	gi|288559503|ref|YP_003422989.1|	-	0.0072	16.8	7.7	2	8.9	1.4	3.9	2	1	2	4	4	4	2	MG2	domain
bMG6	PF17962.1	gi|288559503|ref|YP_003422989.1|	-	0.16	12.1	13.7	0.58	10.3	0.8	3.6	2	1	1	3	3	3	0	Bacterial	macroglobulin	domain	6
PfkB	PF00294.24	gi|288559504|ref|YP_003422990.1|	-	6.7e-57	193.1	0.0	7.6e-57	192.9	0.0	1.0	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
ThiC_Rad_SAM	PF01964.18	gi|288559505|ref|YP_003422991.1|	-	4.9e-180	598.8	0.9	5.5e-180	598.6	0.9	1.0	1	0	0	1	1	1	1	Radical	SAM	ThiC	family
Acyl_transf_3	PF01757.22	gi|288559506|ref|YP_003422992.1|	-	1.8e-22	79.8	55.9	2.3e-22	79.6	55.9	1.0	1	0	0	1	1	1	1	Acyltransferase	family
HTH_1	PF00126.27	gi|288559507|ref|YP_003422993.1|	-	1.4e-07	31.3	0.0	2.3e-07	30.7	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
SIS	PF01380.22	gi|288559508|ref|YP_003422994.1|	-	4.5e-19	68.6	0.2	5.8e-19	68.2	0.2	1.2	1	0	0	1	1	1	1	SIS	domain
SIS_2	PF13580.6	gi|288559508|ref|YP_003422994.1|	-	5.4e-10	39.4	1.4	1.6e-05	24.9	0.2	2.2	1	1	1	2	2	2	2	SIS	domain
Peripla_BP_2	PF01497.18	gi|288559509|ref|YP_003422995.1|	-	1.2e-23	84.0	0.6	1.5e-23	83.6	0.6	1.1	1	0	0	1	1	1	1	Periplasmic	binding	protein
FecCD	PF01032.18	gi|288559510|ref|YP_003422996.1|	-	8.5e-89	297.6	35.7	1e-88	297.4	35.7	1.0	1	0	0	1	1	1	1	FecCD	transport	family
ABC-3	PF00950.17	gi|288559510|ref|YP_003422996.1|	-	0.013	15.0	23.3	0.032	13.7	23.3	1.9	1	1	0	1	1	1	0	ABC	3	transport	family
DUF2929	PF11151.8	gi|288559510|ref|YP_003422996.1|	-	0.063	13.6	0.5	0.063	13.6	0.5	4.0	3	1	2	5	5	5	0	Protein	of	unknown	function	(DUF2929)
ABC_tran	PF00005.27	gi|288559511|ref|YP_003422997.1|	-	6.8e-32	110.8	0.0	9.4e-32	110.4	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|288559511|ref|YP_003422997.1|	-	6.4e-17	62.3	7.7	3.3e-10	40.3	0.2	2.4	2	1	0	3	3	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|288559511|ref|YP_003422997.1|	-	1.6e-08	34.2	0.1	3.6e-05	23.3	0.0	2.1	1	1	1	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_22	PF13401.6	gi|288559511|ref|YP_003422997.1|	-	0.00021	21.6	0.3	0.00065	20.0	0.3	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.6	gi|288559511|ref|YP_003422997.1|	-	0.00062	20.3	0.5	0.00062	20.3	0.5	1.6	2	0	0	2	2	1	1	AAA	domain
Rad17	PF03215.15	gi|288559511|ref|YP_003422997.1|	-	0.0011	18.9	0.0	0.0015	18.5	0.0	1.3	1	0	0	1	1	1	1	Rad17	P-loop	domain
RsgA_GTPase	PF03193.16	gi|288559511|ref|YP_003422997.1|	-	0.0015	18.5	0.0	0.0041	17.0	0.1	1.6	2	0	0	2	2	2	1	RsgA	GTPase
IstB_IS21	PF01695.17	gi|288559511|ref|YP_003422997.1|	-	0.002	17.9	0.0	0.2	11.4	0.0	2.2	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
AAA_30	PF13604.6	gi|288559511|ref|YP_003422997.1|	-	0.0029	17.3	0.1	0.011	15.5	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
AAA_14	PF13173.6	gi|288559511|ref|YP_003422997.1|	-	0.003	17.6	0.4	0.17	11.9	0.1	2.5	2	1	0	2	2	2	1	AAA	domain
AAA_18	PF13238.6	gi|288559511|ref|YP_003422997.1|	-	0.0034	17.9	0.2	0.032	14.8	0.1	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_24	PF13479.6	gi|288559511|ref|YP_003422997.1|	-	0.0043	16.8	0.2	0.015	15.0	0.1	1.8	2	0	0	2	2	2	1	AAA	domain
AAA_29	PF13555.6	gi|288559511|ref|YP_003422997.1|	-	0.0045	16.7	0.1	0.0094	15.7	0.1	1.6	1	1	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA	PF00004.29	gi|288559511|ref|YP_003422997.1|	-	0.006	17.0	0.2	0.043	14.2	0.1	2.1	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_15	PF13175.6	gi|288559511|ref|YP_003422997.1|	-	0.0082	15.9	5.4	0.057	13.1	1.4	2.2	1	1	0	2	2	2	1	AAA	ATPase	domain
AAA_19	PF13245.6	gi|288559511|ref|YP_003422997.1|	-	0.031	14.6	0.2	0.13	12.6	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
AAA_28	PF13521.6	gi|288559511|ref|YP_003422997.1|	-	0.033	14.5	0.2	0.058	13.6	0.2	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_5	PF07728.14	gi|288559511|ref|YP_003422997.1|	-	0.054	13.5	0.1	0.11	12.5	0.1	1.5	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
NACHT	PF05729.12	gi|288559511|ref|YP_003422997.1|	-	0.062	13.2	0.3	0.15	12.0	0.1	1.7	2	0	0	2	2	2	0	NACHT	domain
SbcCD_C	PF13558.6	gi|288559511|ref|YP_003422997.1|	-	0.067	13.4	0.0	0.99	9.7	0.0	2.2	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_13	PF13166.6	gi|288559511|ref|YP_003422997.1|	-	0.091	11.4	0.1	0.15	10.6	0.1	1.3	1	0	0	1	1	1	0	AAA	domain
ATP-synt_ab	PF00006.25	gi|288559511|ref|YP_003422997.1|	-	0.092	12.4	0.0	0.14	11.8	0.0	1.2	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_7	PF12775.7	gi|288559511|ref|YP_003422997.1|	-	0.11	12.0	0.1	0.16	11.4	0.1	1.2	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
PhoH	PF02562.16	gi|288559511|ref|YP_003422997.1|	-	0.12	11.8	0.0	0.22	10.9	0.0	1.4	1	0	0	1	1	1	0	PhoH-like	protein
DLIC	PF05783.11	gi|288559511|ref|YP_003422997.1|	-	0.12	11.2	0.0	0.17	10.7	0.0	1.2	1	0	0	1	1	1	0	Dynein	light	intermediate	chain	(DLIC)
AAA_16	PF13191.6	gi|288559511|ref|YP_003422997.1|	-	0.12	12.7	0.0	0.24	11.8	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_33	PF13671.6	gi|288559511|ref|YP_003422997.1|	-	0.13	12.4	0.1	0.19	11.9	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
Mg_chelatase	PF01078.21	gi|288559511|ref|YP_003422997.1|	-	0.17	11.3	0.0	0.27	10.6	0.0	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_27	PF13514.6	gi|288559511|ref|YP_003422997.1|	-	0.17	11.5	0.0	0.27	10.8	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
SRP54	PF00448.22	gi|288559511|ref|YP_003422997.1|	-	0.22	11.2	0.3	0.37	10.4	0.3	1.4	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
FmdE	PF02663.14	gi|288559512|ref|YP_003422998.1|	-	1.5e-28	99.4	0.2	2e-28	99.1	0.2	1.1	1	0	0	1	1	1	1	FmdE,	Molybdenum	formylmethanofuran	dehydrogenase	operon
zf-dskA_traR	PF01258.17	gi|288559512|ref|YP_003422998.1|	-	3.3e-10	39.7	0.5	6.8e-10	38.7	0.5	1.6	1	0	0	1	1	1	1	Prokaryotic	dksA/traR	C4-type	zinc	finger
LIM	PF00412.22	gi|288559512|ref|YP_003422998.1|	-	0.1	12.9	0.3	0.26	11.5	0.1	1.8	2	0	0	2	2	2	0	LIM	domain
OrfB_Zn_ribbon	PF07282.11	gi|288559512|ref|YP_003422998.1|	-	0.14	12.1	0.5	0.32	11.0	0.5	1.6	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
Beta_helix	PF13229.6	gi|288559513|ref|YP_003422999.1|	-	3.6e-45	153.6	82.2	3.5e-27	95.2	34.1	6.7	4	3	2	7	7	7	3	Right	handed	beta	helix	region
Big_1	PF02369.16	gi|288559513|ref|YP_003422999.1|	-	8.9e-24	83.3	45.6	7.6e-10	38.7	1.4	7.7	7	0	0	7	7	7	4	Bacterial	Ig-like	domain	(group	1)
Big_3_5	PF16640.5	gi|288559513|ref|YP_003422999.1|	-	2.5e-22	78.8	51.8	1.2e-08	35.0	5.1	7.0	7	0	0	7	7	7	4	Bacterial	Ig-like	domain	(group	3)
NosD	PF05048.13	gi|288559513|ref|YP_003422999.1|	-	2.2e-19	69.7	75.1	1.2e-12	47.6	30.5	7.2	4	2	2	6	6	6	3	Periplasmic	copper-binding	protein	(NosD)
MG4	PF17789.1	gi|288559513|ref|YP_003422999.1|	-	2.6e-13	49.9	26.8	0.00073	19.6	0.9	5.5	5	0	0	5	5	5	4	Macroglobulin	domain	MG4
Invasin_D3	PF09134.10	gi|288559513|ref|YP_003422999.1|	-	6e-11	42.5	55.8	9.3e-06	25.9	3.8	7.5	7	0	0	7	7	7	3	Invasin,	domain	3
CarboxypepD_reg	PF13620.6	gi|288559513|ref|YP_003422999.1|	-	9.1e-11	41.9	27.7	3.4e-05	24.0	0.3	6.2	6	0	0	6	6	6	3	Carboxypeptidase	regulatory-like	domain
DUF824	PF05688.11	gi|288559513|ref|YP_003422999.1|	-	0.0012	18.6	0.5	3	7.7	0.0	3.6	3	0	0	3	3	3	2	Salmonella	repeat	of	unknown	function	(DUF824)
YtkA	PF13115.6	gi|288559513|ref|YP_003422999.1|	-	0.02	15.5	6.9	5.3	7.7	0.1	5.2	5	1	0	6	6	6	0	YtkA-like
Phage_integrase	PF00589.22	gi|288559514|ref|YP_003423000.1|	-	5.7e-09	36.0	0.3	0.003	17.4	0.0	2.6	2	0	0	2	2	2	2	Phage	integrase	family
Phage_integr_3	PF16795.5	gi|288559514|ref|YP_003423000.1|	-	6.9e-08	32.6	1.7	3e-05	24.0	0.1	3.2	3	0	0	3	3	3	1	Archaeal	phage	integrase
Phage_int_SAM_4	PF13495.6	gi|288559514|ref|YP_003423000.1|	-	0.00044	20.7	0.4	1.3	9.6	0.1	3.5	3	0	0	3	3	3	2	Phage	integrase,	N-terminal	SAM-like	domain
GrpE	PF01025.19	gi|288559514|ref|YP_003423000.1|	-	0.0063	16.2	4.2	0.017	14.8	2.6	2.1	2	0	0	2	2	2	1	GrpE
YqzH	PF14164.6	gi|288559514|ref|YP_003423000.1|	-	0.0077	16.3	1.5	0.019	15.0	1.5	1.7	1	0	0	1	1	1	1	YqzH-like	protein
DivIC	PF04977.15	gi|288559514|ref|YP_003423000.1|	-	0.015	15.1	2.1	0.043	13.6	2.1	1.7	1	0	0	1	1	1	0	Septum	formation	initiator
Phage_int_SAM_1	PF02899.17	gi|288559514|ref|YP_003423000.1|	-	0.038	14.3	1.2	2.3	8.6	0.1	3.2	3	1	0	3	3	3	0	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_5	PF13102.6	gi|288559514|ref|YP_003423000.1|	-	0.092	13.1	3.4	0.82	10.0	0.0	3.6	4	0	0	4	4	4	0	Phage	integrase	SAM-like	domain
bZIP_1	PF00170.21	gi|288559514|ref|YP_003423000.1|	-	0.55	10.4	8.0	0.088	12.9	2.3	2.6	3	0	0	3	3	3	0	bZIP	transcription	factor
DUF2098	PF09871.9	gi|288559514|ref|YP_003423000.1|	-	1.1	9.7	5.9	2.7	8.4	0.1	2.6	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2098)
TackOD1	PF18551.1	gi|288559516|ref|YP_003423002.1|	-	0.0001	22.0	0.4	0.00018	21.2	0.4	1.4	1	0	0	1	1	1	1	Thaumarchaeal	output	domain	1
zf-ribbon_3	PF13248.6	gi|288559516|ref|YP_003423002.1|	-	0.0007	18.9	3.5	0.0012	18.2	3.5	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|288559516|ref|YP_003423002.1|	-	0.0011	18.9	0.1	0.002	18.1	0.1	1.4	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_15	PF17032.5	gi|288559516|ref|YP_003423002.1|	-	0.0018	19.0	1.0	0.0045	17.7	0.2	2.1	2	0	0	2	2	2	1	zinc-ribbon	family
Auto_anti-p27	PF06677.12	gi|288559516|ref|YP_003423002.1|	-	0.0065	16.6	1.2	0.14	12.4	0.0	2.4	2	0	0	2	2	2	1	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
HypA	PF01155.19	gi|288559516|ref|YP_003423002.1|	-	0.093	12.8	0.1	0.19	11.8	0.1	1.4	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Rpr2	PF04032.16	gi|288559516|ref|YP_003423002.1|	-	0.21	11.9	1.3	17	5.8	0.0	2.7	1	1	1	2	2	2	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
YhfH	PF14149.6	gi|288559516|ref|YP_003423002.1|	-	0.7	9.9	8.3	3.6	7.7	8.0	2.3	1	1	1	2	2	2	0	YhfH-like	protein
zinc_ribbon_2	PF13240.6	gi|288559516|ref|YP_003423002.1|	-	0.74	9.6	5.0	2.6	7.9	5.0	2.0	1	1	0	1	1	1	0	zinc-ribbon	domain
zf_UBZ	PF18439.1	gi|288559516|ref|YP_003423002.1|	-	1.2	8.7	3.8	22	4.8	0.2	2.5	1	1	1	2	2	2	0	Ubiquitin-Binding	Zinc	Finger
zf-IS66	PF13005.7	gi|288559516|ref|YP_003423002.1|	-	4.2	7.9	6.1	11	6.5	0.1	2.9	3	0	0	3	3	3	0	zinc-finger	binding	domain	of	transposase	IS66
AAA_22	PF13401.6	gi|288559517|ref|YP_003423003.1|	-	2e-08	34.6	0.0	3.2e-08	34.0	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.6	gi|288559517|ref|YP_003423003.1|	-	1.1e-05	25.9	0.0	0.0097	16.3	0.0	2.2	1	1	1	2	2	2	2	AAA	ATPase	domain
TniB	PF05621.11	gi|288559517|ref|YP_003423003.1|	-	0.00097	18.6	0.0	0.0015	18.0	0.0	1.3	1	0	0	1	1	1	1	Bacterial	TniB	protein
AAA	PF00004.29	gi|288559517|ref|YP_003423003.1|	-	0.0023	18.4	0.2	0.0046	17.4	0.2	1.5	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_14	PF13173.6	gi|288559517|ref|YP_003423003.1|	-	0.0024	17.9	1.3	0.032	14.2	0.2	2.3	1	1	1	2	2	2	1	AAA	domain
AAA_7	PF12775.7	gi|288559517|ref|YP_003423003.1|	-	0.02	14.4	0.3	0.031	13.8	0.3	1.3	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
DUF815	PF05673.13	gi|288559517|ref|YP_003423003.1|	-	0.02	14.1	0.0	0.32	10.1	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF815)
T2SSE	PF00437.20	gi|288559517|ref|YP_003423003.1|	-	0.061	12.4	0.0	0.094	11.8	0.0	1.2	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
Pox_A32	PF04665.12	gi|288559517|ref|YP_003423003.1|	-	0.087	12.3	1.4	0.22	10.9	1.4	1.6	1	1	0	1	1	1	0	Poxvirus	A32	protein
RAMPs	PF03787.15	gi|288559518|ref|YP_003423004.1|	-	0.32	11.0	2.2	0.39	10.7	1.7	1.5	1	1	0	1	1	1	0	RAMP	superfamily
DUF5527	PF17665.1	gi|288559523|ref|YP_003423009.1|	-	0.076	12.6	0.1	0.077	12.5	0.1	1.1	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5527)
COX2-transmemb	PF09125.10	gi|288559523|ref|YP_003423009.1|	-	0.12	12.2	2.7	0.19	11.6	2.7	1.4	1	0	0	1	1	1	0	Cytochrome	C	oxidase	subunit	II,	transmembrane
CBM_11	PF03425.13	gi|288559525|ref|YP_003423011.1|	-	0.067	13.1	0.5	0.1	12.4	0.5	1.3	1	0	0	1	1	1	0	Carbohydrate	binding	domain	(family	11)
SWIM	PF04434.17	gi|288559526|ref|YP_003423012.1|	-	0.0033	17.1	3.3	0.034	13.8	3.3	2.1	1	1	0	1	1	1	1	SWIM	zinc	finger
Zn_ribbon_SprT	PF17283.2	gi|288559526|ref|YP_003423012.1|	-	0.025	14.5	0.4	0.043	13.7	0.4	1.3	1	0	0	1	1	1	0	SprT-like	zinc	ribbon	domain
MCM_OB	PF17207.3	gi|288559527|ref|YP_003423013.1|	-	2.6e-09	37.0	0.0	1e-08	35.0	0.0	2.0	1	1	0	1	1	1	1	MCM	OB	domain
MCM_N	PF14551.6	gi|288559527|ref|YP_003423013.1|	-	4.3e-09	36.9	0.2	9.1e-09	35.8	0.2	1.6	1	0	0	1	1	1	1	MCM	N-terminal	domain
HNH	PF01844.23	gi|288559527|ref|YP_003423013.1|	-	0.00032	20.8	6.4	0.00032	20.8	6.4	2.1	2	0	0	2	2	2	1	HNH	endonuclease
HNH_2	PF13391.6	gi|288559527|ref|YP_003423013.1|	-	0.00053	20.1	0.5	0.0012	18.9	0.5	1.6	1	0	0	1	1	1	1	HNH	endonuclease
Zn-ribbon_8	PF09723.10	gi|288559527|ref|YP_003423013.1|	-	0.00084	19.4	4.1	0.0066	16.5	0.2	3.2	3	0	0	3	3	3	1	Zinc	ribbon	domain
Cas_CXXC_CXXC	PF09706.10	gi|288559527|ref|YP_003423013.1|	-	0.091	13.0	1.7	4.9	7.5	1.5	2.6	2	0	0	2	2	2	0	CRISPR-associated	protein	(Cas_CXXC_CXXC)
zf-IS66	PF13005.7	gi|288559527|ref|YP_003423013.1|	-	0.24	11.8	8.7	7.2	7.1	0.6	3.6	4	0	0	4	4	4	0	zinc-finger	binding	domain	of	transposase	IS66
Zn_Tnp_IS1595	PF12760.7	gi|288559527|ref|YP_003423013.1|	-	2.5	8.2	6.1	45	4.1	0.0	3.6	4	0	0	4	4	4	0	Transposase	zinc-ribbon	domain
Lebercilin	PF15619.6	gi|288559528|ref|YP_003423014.1|	-	0.0021	17.8	2.2	0.0028	17.3	2.2	1.2	1	0	0	1	1	1	1	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
CEP63	PF17045.5	gi|288559528|ref|YP_003423014.1|	-	0.0028	17.6	3.7	0.0035	17.3	3.7	1.0	1	0	0	1	1	1	1	Centrosomal	protein	of	63	kDa
LZ3wCH	PF18517.1	gi|288559528|ref|YP_003423014.1|	-	0.16	12.1	0.2	0.16	12.1	0.2	2.6	3	0	0	3	3	3	0	Leucine	zipper	with	capping	helix	domain
PhoU	PF01895.19	gi|288559528|ref|YP_003423014.1|	-	0.26	11.8	3.5	0.52	10.8	1.7	2.1	1	1	1	2	2	2	0	PhoU	domain
Ecl1	PF12855.7	gi|288559534|ref|YP_003423020.1|	-	0.00024	22.3	1.6	0.00031	21.9	1.3	1.3	1	1	0	1	1	1	1	ECL1/2/3	zinc	binding	proteins
zf-CHCC	PF10276.9	gi|288559534|ref|YP_003423020.1|	-	0.0013	18.8	0.7	0.0035	17.4	0.3	2.0	2	0	0	2	2	2	1	Zinc-finger	domain
PyrI_C	PF02748.15	gi|288559534|ref|YP_003423020.1|	-	0.0049	16.7	0.3	0.011	15.6	0.3	1.6	1	0	0	1	1	1	1	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
NinG	PF05766.12	gi|288559534|ref|YP_003423020.1|	-	0.0064	16.4	6.8	0.0064	16.4	6.8	1.3	1	1	0	1	1	1	1	Bacteriophage	Lambda	NinG	protein
zf-BED	PF02892.15	gi|288559534|ref|YP_003423020.1|	-	0.014	15.4	0.2	0.036	14.1	0.2	1.6	1	0	0	1	1	1	0	BED	zinc	finger
C1_1	PF00130.22	gi|288559534|ref|YP_003423020.1|	-	0.023	14.6	1.5	0.037	13.9	1.5	1.3	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
DUF2116	PF09889.9	gi|288559534|ref|YP_003423020.1|	-	0.037	14.0	1.9	0.074	13.0	1.9	1.5	1	0	0	1	1	1	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
zf-C2H2	PF00096.26	gi|288559534|ref|YP_003423020.1|	-	0.042	14.3	1.2	0.042	14.3	1.2	1.9	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
zf-MYND	PF01753.18	gi|288559534|ref|YP_003423020.1|	-	0.06	13.4	4.0	0.12	12.4	4.0	1.5	1	1	0	1	1	1	0	MYND	finger
DUF2256	PF10013.9	gi|288559534|ref|YP_003423020.1|	-	0.078	13.1	9.5	1.3	9.2	9.5	2.2	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2256)
zinc_ribbon_2	PF13240.6	gi|288559535|ref|YP_003423021.1|	-	1.4e-09	37.4	7.4	2.3e-09	36.7	7.4	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|288559535|ref|YP_003423021.1|	-	3.7e-07	29.3	3.3	5.8e-07	28.7	3.3	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|288559535|ref|YP_003423021.1|	-	8.3e-06	25.7	1.0	1.4e-05	25.0	1.0	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
Nudix_N_2	PF14803.6	gi|288559535|ref|YP_003423021.1|	-	2.8e-05	23.9	2.4	0.075	13.0	0.3	2.5	2	0	0	2	2	2	2	Nudix	N-terminal
zinc_ribbon_15	PF17032.5	gi|288559535|ref|YP_003423021.1|	-	0.0018	19.0	3.1	0.0048	17.6	3.1	1.7	1	0	0	1	1	1	1	zinc-ribbon	family
UPF0547	PF10571.9	gi|288559535|ref|YP_003423021.1|	-	0.0074	16.3	1.0	0.012	15.7	1.0	1.3	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
RNA_POL_M_15KD	PF02150.16	gi|288559535|ref|YP_003423021.1|	-	0.03	14.2	3.2	1.4	8.8	1.1	2.5	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
TF_Zn_Ribbon	PF08271.12	gi|288559535|ref|YP_003423021.1|	-	0.059	12.9	3.4	0.21	11.1	3.4	1.9	1	1	0	1	1	1	0	TFIIB	zinc-binding
YhfH	PF14149.6	gi|288559535|ref|YP_003423021.1|	-	0.082	12.9	3.0	0.84	9.7	0.3	2.6	1	1	1	2	2	2	0	YhfH-like	protein
DUF2116	PF09889.9	gi|288559535|ref|YP_003423021.1|	-	0.15	12.1	0.6	0.29	11.1	0.6	1.5	1	0	0	1	1	1	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
zf-ISL3	PF14690.6	gi|288559535|ref|YP_003423021.1|	-	0.86	10.3	3.8	12	6.7	0.5	2.9	2	1	1	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
EGF_alliinase	PF04863.13	gi|288559536|ref|YP_003423022.1|	-	0.026	14.9	0.6	0.034	14.5	0.6	1.2	1	0	0	1	1	1	0	Alliinase	EGF-like	domain
DUF3149	PF11346.8	gi|288559536|ref|YP_003423022.1|	-	0.16	11.6	1.7	1.8	8.2	0.0	2.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3149)
Vpu	PF00558.19	gi|288559537|ref|YP_003423023.1|	-	0.012	15.3	2.0	0.022	14.5	2.0	1.4	1	0	0	1	1	1	0	Vpu	protein
PetG	PF02529.15	gi|288559537|ref|YP_003423023.1|	-	0.014	15.2	0.0	0.025	14.4	0.0	1.4	1	0	0	1	1	1	0	Cytochrome	B6-F	complex	subunit	5
Saf_2TM	PF18303.1	gi|288559537|ref|YP_003423023.1|	-	2.8	7.5	6.1	5.5	6.6	0.7	2.1	1	1	0	2	2	2	0	SAVED-fused	2TM	effector	domain
ParBc	PF02195.18	gi|288559538|ref|YP_003423024.1|	-	3.4e-05	24.0	0.0	6.9e-05	23.1	0.0	1.5	1	0	0	1	1	1	1	ParB-like	nuclease	domain
Vut_1	PF02592.15	gi|288559541|ref|YP_003423027.1|	-	1.1e-43	149.2	6.4	1.1e-43	149.2	6.4	1.7	2	0	0	2	2	2	1	Putative	vitamin	uptake	transporter
EIIC-GAT	PF03611.14	gi|288559541|ref|YP_003423027.1|	-	2.9	6.9	14.6	0.58	9.2	2.1	3.0	2	1	1	3	3	3	0	PTS	system	sugar-specific	permease	component
PPV_E2_C	PF00511.17	gi|288559542|ref|YP_003423028.1|	-	0.029	14.5	0.1	0.064	13.4	0.1	1.6	1	0	0	1	1	1	0	E2	(early)	protein,	C	terminal
Terminase_6C	PF17289.2	gi|288559543|ref|YP_003423029.1|	-	3.6e-08	33.6	0.0	6e-08	32.9	0.0	1.3	1	0	0	1	1	1	1	Terminase	RNaseH-like	domain
Terminase_6	PF03237.15	gi|288559543|ref|YP_003423029.1|	-	2.9e-06	27.1	0.2	0.0017	18.1	0.0	2.5	3	0	0	3	3	3	2	Terminase-like	family
Sulf_transp	PF04143.14	gi|288559543|ref|YP_003423029.1|	-	0.21	11.1	0.2	0.31	10.6	0.2	1.2	1	0	0	1	1	1	0	Sulphur	transport
PDZ_2	PF13180.6	gi|288559544|ref|YP_003423030.1|	-	0.016	15.5	10.9	34	4.8	0.1	6.2	6	0	0	6	6	6	0	PDZ	domain
PBS_linker_poly	PF00427.21	gi|288559544|ref|YP_003423030.1|	-	0.69	10.0	14.0	3.3	7.7	0.2	3.9	3	1	1	4	4	4	0	Phycobilisome	Linker	polypeptide
Phage_portal	PF04860.12	gi|288559545|ref|YP_003423031.1|	-	9.4e-16	57.9	0.0	1.4e-15	57.3	0.0	1.2	1	0	0	1	1	1	1	Phage	portal	protein
Phage_Mu_F	PF04233.14	gi|288559546|ref|YP_003423032.1|	-	3e-10	40.8	0.6	1.6e-09	38.5	0.1	2.5	2	0	0	2	2	2	1	Phage	Mu	protein	F	like	protein
Phytoreo_P8	PF07124.11	gi|288559546|ref|YP_003423032.1|	-	0.16	10.9	0.0	0.27	10.2	0.0	1.2	1	0	0	1	1	1	0	Phytoreovirus	outer	capsid	protein	P8
Stealth_CR3	PF17102.5	gi|288559546|ref|YP_003423032.1|	-	0.24	11.3	6.1	3.5	7.6	0.0	4.4	4	0	0	4	4	4	0	Stealth	protein	CR3,	conserved	region	3
DUF3040	PF11239.8	gi|288559546|ref|YP_003423032.1|	-	0.61	10.4	8.8	2.3	8.5	0.3	3.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3040)
FCH	PF00611.23	gi|288559546|ref|YP_003423032.1|	-	2.1	8.7	5.7	94	3.4	0.1	4.5	4	0	0	4	4	4	0	Fes/CIP4,	and	EFC/F-BAR	homology	domain
Spore_III_AB	PF09548.10	gi|288559548|ref|YP_003423034.1|	-	0.075	13.1	1.5	0.085	13.0	0.2	1.8	2	0	0	2	2	2	0	Stage	III	sporulation	protein	AB	(spore_III_AB)
DUF4675	PF15720.5	gi|288559548|ref|YP_003423034.1|	-	0.14	12.0	0.0	0.21	11.4	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4675)
Peptidase_M3_N	PF08439.10	gi|288559548|ref|YP_003423034.1|	-	0.24	11.7	4.2	0.51	10.7	3.8	2.0	1	1	0	1	1	1	0	Oligopeptidase	F
BH4	PF02180.17	gi|288559551|ref|YP_003423037.1|	-	0.0025	17.6	4.7	0.025	14.4	0.2	3.0	3	0	0	3	3	3	2	Bcl-2	homology	region	4
Paramyxo_P_V_N	PF13825.6	gi|288559552|ref|YP_003423038.1|	-	1.8	7.9	5.1	1.9	7.8	5.1	1.0	1	0	0	1	1	1	0	Paramyxovirus	structural	protein	V/P	N-terminus
DUF2958	PF11171.8	gi|288559556|ref|YP_003423042.1|	-	2.6e-10	40.5	0.0	4.1e-10	39.9	0.0	1.3	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF2958)
DUF4314	PF14192.6	gi|288559557|ref|YP_003423043.1|	-	1.5e-28	98.5	0.2	1.7e-28	98.3	0.2	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4314)
DUF3848	PF12959.7	gi|288559559|ref|YP_003423045.1|	-	0.025	14.6	0.1	0.043	13.9	0.1	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3848)
DUF2680	PF10925.8	gi|288559559|ref|YP_003423045.1|	-	0.028	14.4	0.3	0.1	12.6	0.3	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2680)
Glycos_trans_3N	PF02885.17	gi|288559559|ref|YP_003423045.1|	-	0.068	13.0	0.1	1.1	9.2	0.1	2.0	1	1	1	2	2	2	0	Glycosyl	transferase	family,	helical	bundle	domain
DUF4224	PF13986.6	gi|288559561|ref|YP_003423047.1|	-	0.044	13.7	0.0	0.081	12.8	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4224)
LEDGF	PF11467.8	gi|288559561|ref|YP_003423047.1|	-	0.061	12.9	0.1	0.067	12.8	0.1	1.1	1	0	0	1	1	1	0	Lens	epithelium-derived	growth	factor	(LEDGF)
Rtt106	PF08512.12	gi|288559561|ref|YP_003423047.1|	-	0.16	12.4	0.3	0.4	11.1	0.3	1.7	1	1	0	1	1	1	0	Histone	chaperone	Rttp106-like
HEAT_2	PF13646.6	gi|288559563|ref|YP_003423049.1|	-	1.6e-13	50.9	15.2	0.0091	16.4	0.1	9.9	1	1	4	7	7	7	4	HEAT	repeats
DUF3458_C	PF17432.2	gi|288559563|ref|YP_003423049.1|	-	6e-07	29.1	5.1	0.69	9.2	0.0	5.2	1	1	5	6	6	6	2	Domain	of	unknown	function	(DUF3458_C)	ARM	repeats
HEAT	PF02985.22	gi|288559563|ref|YP_003423049.1|	-	1.2e-05	25.2	15.2	17	6.0	0.0	9.9	11	0	0	11	11	11	0	HEAT	repeat
Clathrin	PF00637.20	gi|288559563|ref|YP_003423049.1|	-	1.3e-05	25.1	21.5	0.055	13.3	0.4	5.4	1	1	4	5	5	5	4	Region	in	Clathrin	and	VPS
DUF3306	PF11748.8	gi|288559563|ref|YP_003423049.1|	-	0.014	16.3	10.7	1.4	9.8	0.9	4.7	1	1	2	4	4	4	0	Protein	of	unknown	function	(DUF3306)
Guanylin	PF02058.15	gi|288559563|ref|YP_003423049.1|	-	0.026	15.0	8.1	63	4.1	0.0	6.7	4	2	4	10	10	9	0	Guanylin	precursor
Ribosomal_L27	PF01016.19	gi|288559563|ref|YP_003423049.1|	-	0.06	13.4	1.3	30	4.7	0.1	4.5	4	1	1	5	5	5	0	Ribosomal	L27	protein
RTP1_C2	PF10304.9	gi|288559563|ref|YP_003423049.1|	-	0.072	12.8	0.0	33	4.3	0.0	3.4	4	0	0	4	4	4	0	Required	for	nuclear	transport	of	RNA	pol	II	C-terminus	2
DUF4092	PF13322.6	gi|288559563|ref|YP_003423049.1|	-	0.1	12.4	11.1	3.4	7.5	0.0	4.1	1	1	3	4	4	4	0	Domain	of	unknown	function	(DUF4092)
DUF4573	PF15140.6	gi|288559563|ref|YP_003423049.1|	-	0.19	11.5	0.1	6.4	6.5	0.0	2.8	3	1	0	3	3	3	0	Domain	of	unknown	function	(DUF4573)
DUF3385	PF11865.8	gi|288559563|ref|YP_003423049.1|	-	0.24	11.3	10.7	88	3.0	0.0	7.4	8	2	0	10	10	10	0	Domain	of	unknown	function	(DUF3385)
Ribosomal_L37ae	PF01780.19	gi|288559564|ref|YP_003423050.1|	-	0.003	17.6	0.8	0.013	15.6	0.8	2.1	1	0	0	1	1	1	1	Ribosomal	L37ae	protein	family
DUF2252	PF10009.9	gi|288559564|ref|YP_003423050.1|	-	0.045	12.8	14.8	0.063	12.3	14.8	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2252)
Calcyon	PF06387.11	gi|288559564|ref|YP_003423050.1|	-	2.5	8.1	0.0	2.5	8.1	0.0	2.9	3	1	1	4	4	4	0	D1	dopamine	receptor-interacting	protein	(calcyon)
Asp-B-Hydro_N	PF05279.11	gi|288559564|ref|YP_003423050.1|	-	5.8	6.9	36.8	8.4	6.4	36.8	1.2	1	0	0	1	1	1	0	Aspartyl	beta-hydroxylase	N-terminal	region
DUF3523	PF12037.8	gi|288559564|ref|YP_003423050.1|	-	9.6	5.5	46.1	15	4.9	46.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3523)
Peptidase_S78_2	PF14550.6	gi|288559565|ref|YP_003423051.1|	-	2.7e-33	114.6	0.0	8.1e-33	113.1	0.0	1.8	1	0	0	1	1	1	1	Putative	phage	serine	protease	XkdF
Phage_capsid	PF05065.13	gi|288559566|ref|YP_003423052.1|	-	0.044	13.1	0.1	0.34	10.2	0.0	2.2	2	1	0	2	2	2	0	Phage	capsid	family
Pentapeptide	PF00805.22	gi|288559566|ref|YP_003423052.1|	-	0.13	11.9	0.2	0.94	9.2	0.1	2.1	2	0	0	2	2	2	0	Pentapeptide	repeats	(8	copies)
Exonuc_V_gamma	PF04257.14	gi|288559568|ref|YP_003423054.1|	-	0.028	12.7	0.0	0.032	12.5	0.0	1.0	1	0	0	1	1	1	0	Exodeoxyribonuclease	V,	gamma	subunit
HK97-gp10_like	PF04883.12	gi|288559569|ref|YP_003423055.1|	-	6.2e-11	43.1	0.1	1.3e-10	42.0	0.0	1.6	2	0	0	2	2	2	1	Bacteriophage	HK97-gp10,	putative	tail-component
PRC	PF05239.16	gi|288559569|ref|YP_003423055.1|	-	0.17	12.0	0.0	0.36	10.9	0.0	1.6	1	0	0	1	1	1	0	PRC-barrel	domain
CarboxypepD_reg	PF13620.6	gi|288559571|ref|YP_003423057.1|	-	9.2e-10	38.7	1.8	2.4e-09	37.4	1.8	1.7	1	0	0	1	1	1	1	Carboxypeptidase	regulatory-like	domain
Big_1	PF02369.16	gi|288559571|ref|YP_003423057.1|	-	0.00048	20.1	3.5	0.0014	18.6	3.1	2.1	2	0	0	2	2	2	1	Bacterial	Ig-like	domain	(group	1)
Invasin_D3	PF09134.10	gi|288559571|ref|YP_003423057.1|	-	0.00059	20.1	2.0	0.00069	19.9	0.5	1.9	2	0	0	2	2	2	1	Invasin,	domain	3
SdrD_B	PF17210.3	gi|288559571|ref|YP_003423057.1|	-	0.0031	17.7	0.6	0.0089	16.2	0.6	1.8	1	0	0	1	1	1	1	SdrD	B-like	domain
SpaA	PF17802.1	gi|288559571|ref|YP_003423057.1|	-	0.082	13.2	0.8	0.21	11.9	0.2	2.0	2	0	0	2	2	2	0	Prealbumin-like	fold	domain
Cadherin_4	PF17803.1	gi|288559571|ref|YP_003423057.1|	-	0.11	13.2	3.0	0.3	11.7	3.0	1.8	1	0	0	1	1	1	0	Bacterial	cadherin-like	domain
Baculo_PEP_C	PF04513.12	gi|288559573|ref|YP_003423059.1|	-	0.00021	21.4	18.6	0.2	11.7	2.4	6.5	4	2	5	9	9	9	3	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
K-cyclin_vir_C	PF09080.10	gi|288559573|ref|YP_003423059.1|	-	0.0067	16.8	1.6	7.8	7.0	0.0	3.9	3	0	0	3	3	3	2	K	cyclin,	C	terminal
Apolipoprotein	PF01442.18	gi|288559573|ref|YP_003423059.1|	-	0.028	14.3	0.1	3.4	7.5	0.4	3.7	3	1	0	3	3	3	0	Apolipoprotein	A1/A4/E	domain
THF_DHG_CYH	PF00763.23	gi|288559573|ref|YP_003423059.1|	-	0.073	13.4	1.0	0.49	10.7	0.2	2.5	2	0	0	2	2	2	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	catalytic	domain
MbeB_N	PF04837.12	gi|288559573|ref|YP_003423059.1|	-	1.5	9.2	4.9	9.5	6.6	0.1	4.3	4	0	0	4	4	4	0	MbeB-like,	N-term	conserved	region
Transglut_core	PF01841.19	gi|288559575|ref|YP_003423061.1|	-	0.003	18.0	0.2	0.0072	16.8	0.2	1.7	1	0	0	1	1	1	1	Transglutaminase-like	superfamily
CarboxypepD_reg	PF13620.6	gi|288559576|ref|YP_003423062.1|	-	0.0014	18.9	10.6	0.76	10.1	0.1	3.9	2	1	2	4	4	4	2	Carboxypeptidase	regulatory-like	domain
Big_1	PF02369.16	gi|288559576|ref|YP_003423062.1|	-	2.5	8.2	10.6	1.4	9.0	4.4	3.3	3	1	0	3	3	3	0	Bacterial	Ig-like	domain	(group	1)
Peptidase_C39	PF03412.15	gi|288559578|ref|YP_003423064.1|	-	3.7e-09	36.5	0.1	2.6e-08	33.7	0.0	2.1	1	1	0	1	1	1	1	Peptidase	C39	family
Peptidase_C39_2	PF13529.6	gi|288559578|ref|YP_003423064.1|	-	8.4e-06	26.4	1.3	2.6e-05	24.8	0.8	2.0	1	1	1	2	2	2	1	Peptidase_C39	like	family
Peptidase_C70	PF12385.8	gi|288559578|ref|YP_003423064.1|	-	5.4e-05	23.2	0.0	9.8e-05	22.4	0.0	1.4	1	1	0	1	1	1	1	Papain-like	cysteine	protease	AvrRpt2
DUF4145	PF13643.6	gi|288559579|ref|YP_003423065.1|	-	0.00089	19.3	0.2	0.003	17.6	0.2	1.9	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4145)
AAA_22	PF13401.6	gi|288559579|ref|YP_003423065.1|	-	0.0069	16.7	0.0	0.026	14.8	0.0	2.0	1	0	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.17	gi|288559579|ref|YP_003423065.1|	-	0.007	16.1	0.2	0.7	9.6	0.0	2.3	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
AAA_18	PF13238.6	gi|288559579|ref|YP_003423065.1|	-	0.067	13.7	7.8	1.1	9.8	0.0	4.0	5	1	0	6	6	6	0	AAA	domain
HEPN_Apea	PF18739.1	gi|288559579|ref|YP_003423065.1|	-	0.074	13.5	0.5	0.074	13.5	0.5	5.4	2	2	0	4	4	4	0	Apea-like	HEPN
Mg_chelatase	PF01078.21	gi|288559579|ref|YP_003423065.1|	-	0.22	10.9	0.0	0.37	10.1	0.0	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
DUF86	PF01934.17	gi|288559579|ref|YP_003423065.1|	-	0.81	9.6	8.1	0.2	11.5	0.2	3.7	3	2	1	4	4	4	0	Protein	of	unknown	function	DUF86
Sec7_N	PF12783.7	gi|288559580|ref|YP_003423066.1|	-	0.072	13.0	2.7	0.08	12.8	0.2	2.4	3	0	0	3	3	3	0	Guanine	nucleotide	exchange	factor	in	Golgi	transport	N-terminal
DUF87	PF01935.17	gi|288559581|ref|YP_003423067.1|	-	2.2e-10	41.1	1.2	2.2e-10	41.1	1.2	4.1	4	1	1	5	5	5	1	Helicase	HerA,	central	domain
DUF853	PF05872.12	gi|288559581|ref|YP_003423067.1|	-	0.00015	20.5	0.0	0.0007	18.3	0.0	1.8	2	0	0	2	2	2	1	Bacterial	protein	of	unknown	function	(DUF853)
TrwB_AAD_bind	PF10412.9	gi|288559581|ref|YP_003423067.1|	-	0.0013	17.7	0.0	0.0034	16.4	0.0	1.7	1	0	0	1	1	1	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA_7	PF12775.7	gi|288559581|ref|YP_003423067.1|	-	0.0017	17.9	0.0	0.0073	15.8	0.0	2.1	2	0	0	2	2	2	1	P-loop	containing	dynein	motor	region
AAA_22	PF13401.6	gi|288559581|ref|YP_003423067.1|	-	0.0034	17.7	0.0	0.24	11.7	0.0	2.9	1	1	1	2	2	2	1	AAA	domain
NACHT	PF05729.12	gi|288559581|ref|YP_003423067.1|	-	0.006	16.5	0.4	0.027	14.4	0.4	2.1	1	1	0	1	1	1	1	NACHT	domain
AAA_16	PF13191.6	gi|288559581|ref|YP_003423067.1|	-	0.038	14.4	0.0	10	6.4	0.0	2.5	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_33	PF13671.6	gi|288559581|ref|YP_003423067.1|	-	0.078	13.1	0.0	6.6	6.9	0.0	2.7	2	0	0	2	2	2	0	AAA	domain
TsaE	PF02367.17	gi|288559581|ref|YP_003423067.1|	-	0.081	12.9	0.3	0.3	11.1	0.0	2.1	2	0	0	2	2	2	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
ORF6N	PF10543.9	gi|288559581|ref|YP_003423067.1|	-	0.27	11.4	3.6	0.42	10.9	0.1	3.3	3	0	0	3	3	3	0	ORF6N	domain
N6_Mtase	PF02384.16	gi|288559582|ref|YP_003423068.1|	-	1.5e-22	80.2	0.2	2.5e-21	76.3	0.2	2.7	1	1	0	1	1	1	1	N-6	DNA	Methylase
TaqI_C	PF12950.7	gi|288559582|ref|YP_003423068.1|	-	1.2e-16	60.9	2.1	1.2e-16	60.9	2.1	3.3	3	0	0	3	3	3	1	TaqI-like	C-terminal	specificity	domain
Eco57I	PF07669.11	gi|288559582|ref|YP_003423068.1|	-	3.4e-12	46.8	3.4	5.4e-12	46.1	0.8	2.7	2	0	0	2	2	2	1	Eco57I	restriction-modification	methylase
UPF0020	PF01170.18	gi|288559582|ref|YP_003423068.1|	-	0.023	14.4	0.0	3.1	7.5	0.0	2.7	2	1	0	2	2	2	0	Putative	RNA	methylase	family	UPF0020
MarR_2	PF12802.7	gi|288559583|ref|YP_003423069.1|	-	0.0022	17.9	0.0	0.0024	17.7	0.0	1.1	1	0	0	1	1	1	1	MarR	family
Fe_dep_repress	PF01325.19	gi|288559583|ref|YP_003423069.1|	-	0.0027	17.8	0.0	0.0052	17.0	0.0	1.5	2	0	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_5	PF01022.20	gi|288559583|ref|YP_003423069.1|	-	0.0076	16.1	0.0	0.011	15.6	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
Replic_Relax	PF13814.6	gi|288559583|ref|YP_003423069.1|	-	0.0088	16.1	0.0	0.0099	16.0	0.0	1.1	1	0	0	1	1	1	1	Replication-relaxation
HTH_45	PF14947.6	gi|288559583|ref|YP_003423069.1|	-	0.012	15.6	0.0	0.017	15.1	0.0	1.3	1	0	0	1	1	1	0	Winged	helix-turn-helix
HxlR	PF01638.17	gi|288559583|ref|YP_003423069.1|	-	0.022	14.6	0.1	0.025	14.4	0.1	1.2	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
TrmB	PF01978.19	gi|288559583|ref|YP_003423069.1|	-	0.027	14.3	0.1	0.047	13.6	0.1	1.3	1	1	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_20	PF12840.7	gi|288559583|ref|YP_003423069.1|	-	0.049	13.7	0.0	0.064	13.3	0.0	1.4	1	1	0	1	1	1	0	Helix-turn-helix	domain
Rio2_N	PF09202.11	gi|288559583|ref|YP_003423069.1|	-	0.057	13.6	0.0	0.073	13.3	0.0	1.2	1	0	0	1	1	1	0	Rio2,	N-terminal
Rrf2	PF02082.20	gi|288559583|ref|YP_003423069.1|	-	0.088	13.2	0.0	0.11	12.9	0.0	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_Crp_2	PF13545.6	gi|288559583|ref|YP_003423069.1|	-	0.097	12.7	0.0	0.11	12.5	0.0	1.2	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
DUF4364	PF14277.6	gi|288559583|ref|YP_003423069.1|	-	0.11	12.2	0.0	0.15	11.8	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4364)
DUF1495	PF07381.11	gi|288559583|ref|YP_003423069.1|	-	0.12	12.2	0.0	2.6	7.9	0.0	2.1	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain	(DUF1495)
HTH_IclR	PF09339.10	gi|288559583|ref|YP_003423069.1|	-	0.16	11.8	0.0	0.23	11.3	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
Big_1	PF02369.16	gi|288559584|ref|YP_003423070.1|	-	1.4e-14	53.9	29.3	4.6e-06	26.5	7.0	5.2	4	1	1	5	5	5	3	Bacterial	Ig-like	domain	(group	1)
MG4	PF17789.1	gi|288559584|ref|YP_003423070.1|	-	2.6e-11	43.5	11.0	0.0014	18.7	1.4	3.8	3	0	0	3	3	3	3	Macroglobulin	domain	MG4
Big_3_5	PF16640.5	gi|288559584|ref|YP_003423070.1|	-	2.7e-11	43.5	46.8	1.7e-08	34.5	11.8	5.6	4	1	1	6	6	6	3	Bacterial	Ig-like	domain	(group	3)
Beta_helix	PF13229.6	gi|288559584|ref|YP_003423070.1|	-	1.2e-08	35.0	21.4	1.2e-08	35.0	21.4	3.9	3	1	2	5	5	5	1	Right	handed	beta	helix	region
Invasin_D3	PF09134.10	gi|288559584|ref|YP_003423070.1|	-	7.7e-07	29.3	43.2	0.006	16.9	11.2	5.2	5	1	1	6	6	6	3	Invasin,	domain	3
CarboxypepD_reg	PF13620.6	gi|288559584|ref|YP_003423070.1|	-	7.3e-06	26.2	17.9	0.16	12.3	0.1	4.5	3	1	0	3	3	3	3	Carboxypeptidase	regulatory-like	domain
NosD	PF05048.13	gi|288559584|ref|YP_003423070.1|	-	0.00039	19.8	12.7	0.00039	19.8	12.7	4.0	3	1	1	4	4	4	2	Periplasmic	copper-binding	protein	(NosD)
ZinT	PF09223.11	gi|288559584|ref|YP_003423070.1|	-	1.2	9.0	5.8	7.6	6.4	3.5	2.7	2	1	0	2	2	2	0	ZinT	(YodA)	periplasmic	lipocalin-like	zinc-recruitment
Beta_helix	PF13229.6	gi|288559585|ref|YP_003423071.1|	-	3.7e-13	49.6	26.6	3.7e-13	49.6	26.6	3.6	2	1	0	3	3	3	1	Right	handed	beta	helix	region
DUF2162	PF09930.9	gi|288559586|ref|YP_003423072.1|	-	1.1e-05	25.0	25.7	0.00024	20.6	25.7	2.1	1	1	0	1	1	1	1	Predicted	transporter	(DUF2162)
Phage_holin_5_2	PF16079.5	gi|288559586|ref|YP_003423072.1|	-	0.01	16.1	12.1	0.045	14.1	0.2	3.6	3	1	1	4	4	4	0	Phage	holin	family	Hol44,	in	holin	superfamily	V
MotA_ExbB	PF01618.16	gi|288559587|ref|YP_003423073.1|	-	1.7e-08	34.3	0.3	3.3e-08	33.3	0.3	1.6	1	1	0	1	1	1	1	MotA/TolQ/ExbB	proton	channel	family
DUF2530	PF10745.9	gi|288559587|ref|YP_003423073.1|	-	0.96	9.7	4.5	1.1	9.6	0.6	2.4	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2530)
RIFIN	PF02009.16	gi|288559587|ref|YP_003423073.1|	-	1.9	8.3	6.1	2.1	8.2	3.7	1.9	2	0	0	2	2	2	0	Rifin
DUF2149	PF09919.9	gi|288559588|ref|YP_003423074.1|	-	4.8e-16	58.8	0.3	6.1e-16	58.5	0.3	1.1	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2149)
OEP	PF02321.18	gi|288559588|ref|YP_003423074.1|	-	0.0084	15.9	0.3	0.011	15.6	0.3	1.1	1	0	0	1	1	1	1	Outer	membrane	efflux	protein
Neurokinin_B	PF03823.14	gi|288559588|ref|YP_003423074.1|	-	0.036	14.1	0.1	0.07	13.2	0.1	1.5	1	0	0	1	1	1	0	Neurokinin	B
Ion_trans	PF00520.31	gi|288559588|ref|YP_003423074.1|	-	0.039	13.2	0.0	0.039	13.2	0.0	1.0	1	0	0	1	1	1	0	Ion	transport	protein
DUF2615	PF11027.8	gi|288559588|ref|YP_003423074.1|	-	0.087	13.0	0.0	0.11	12.7	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2615)
Big_1	PF02369.16	gi|288559589|ref|YP_003423075.1|	-	2.9e-18	65.6	25.7	6.6e-11	42.1	7.8	4.4	4	0	0	4	4	4	3	Bacterial	Ig-like	domain	(group	1)
Big_3_5	PF16640.5	gi|288559589|ref|YP_003423075.1|	-	5.4e-17	61.7	30.1	1.2e-08	35.0	5.2	4.3	4	0	0	4	4	4	3	Bacterial	Ig-like	domain	(group	3)
Invasin_D3	PF09134.10	gi|288559589|ref|YP_003423075.1|	-	4.4e-11	42.9	37.3	8.8e-09	35.6	10.2	4.3	4	1	1	5	5	5	3	Invasin,	domain	3
YtkA	PF13115.6	gi|288559589|ref|YP_003423075.1|	-	0.00072	20.1	5.6	0.42	11.2	0.2	3.1	2	0	0	2	2	2	2	YtkA-like
CarboxypepD_reg	PF13620.6	gi|288559589|ref|YP_003423075.1|	-	0.002	18.4	15.4	0.019	15.2	1.0	3.9	2	1	0	3	3	3	2	Carboxypeptidase	regulatory-like	domain
Big_7	PF17957.1	gi|288559589|ref|YP_003423075.1|	-	0.0028	18.4	26.1	1.4	9.8	0.1	5.2	3	1	1	4	4	4	3	Bacterial	Ig	domain
Fer2_4	PF13510.6	gi|288559589|ref|YP_003423075.1|	-	0.023	14.8	0.7	1.7	8.7	0.0	3.0	3	0	0	3	3	3	0	2Fe-2S	iron-sulfur	cluster	binding	domain
fn3_3	PF14686.6	gi|288559589|ref|YP_003423075.1|	-	0.026	14.3	4.0	2.9	7.7	0.2	2.7	2	0	0	2	2	2	0	Polysaccharide	lyase	family	4,	domain	II
Glyco_hydro_65C	PF03633.15	gi|288559589|ref|YP_003423075.1|	-	0.031	14.2	0.0	5.1	7.1	0.0	3.1	2	1	0	2	2	2	0	Glycosyl	hydrolase	family	65,	C-terminal	domain
DUF348	PF03990.14	gi|288559589|ref|YP_003423075.1|	-	0.036	13.8	4.7	0.48	10.2	0.8	3.2	2	0	0	2	2	2	0	G5-linked-Ubiquitin-like	domain
Lactonase	PF10282.9	gi|288559589|ref|YP_003423075.1|	-	0.049	12.9	6.5	0.051	12.8	2.2	2.1	1	1	0	2	2	2	0	Lactonase,	7-bladed	beta-propeller
TbpB_B_D	PF01298.18	gi|288559589|ref|YP_003423075.1|	-	0.25	11.7	15.1	0.035	14.5	2.4	2.7	2	0	0	2	2	2	0	C-lobe	and	N-lobe	beta	barrels	of	Tf-binding	protein	B
Form_Nir_trans	PF01226.17	gi|288559590|ref|YP_003423076.1|	-	1.8e-83	279.5	34.3	2e-83	279.3	34.3	1.0	1	0	0	1	1	1	1	Formate/nitrite	transporter
Molybdopterin	PF00384.22	gi|288559591|ref|YP_003423077.1|	-	5.5e-89	299.1	0.0	6.6e-89	298.8	0.0	1.1	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase
Molydop_binding	PF01568.21	gi|288559591|ref|YP_003423077.1|	-	1.2e-24	86.5	0.0	3.4e-24	85.0	0.0	1.8	1	0	0	1	1	1	1	Molydopterin	dinucleotide	binding	domain
Molybdop_Fe4S4	PF04879.16	gi|288559591|ref|YP_003423077.1|	-	7.8e-23	80.2	0.4	1.4e-22	79.4	0.4	1.5	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase	Fe4S4	domain
Molybdopterin_N	PF18364.1	gi|288559591|ref|YP_003423077.1|	-	0.052	13.6	0.2	0.16	12.0	0.1	1.9	2	0	0	2	2	2	0	Molybdopterin	oxidoreductase	N-terminal	domain
FrhB_FdhB_C	PF04432.13	gi|288559592|ref|YP_003423078.1|	-	6.9e-34	116.9	0.3	6.9e-34	116.9	0.3	1.8	2	0	0	2	2	2	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	C	terminus
FrhB_FdhB_N	PF04422.13	gi|288559592|ref|YP_003423078.1|	-	1.8e-22	79.3	0.1	3.9e-22	78.2	0.1	1.6	1	0	0	1	1	1	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	N-term
Fer4_10	PF13237.6	gi|288559592|ref|YP_003423078.1|	-	6.1e-05	23.0	20.5	0.00052	20.1	1.4	3.4	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|288559592|ref|YP_003423078.1|	-	0.00051	19.8	22.5	0.0031	17.3	7.1	3.1	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|288559592|ref|YP_003423078.1|	-	0.0011	19.0	17.7	0.01	15.9	3.5	3.5	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|288559592|ref|YP_003423078.1|	-	0.013	15.9	25.7	0.13	12.7	23.4	3.0	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|288559592|ref|YP_003423078.1|	-	0.027	14.7	11.7	0.6	10.3	2.5	3.3	3	0	0	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|288559592|ref|YP_003423078.1|	-	0.027	15.0	24.4	0.67	10.6	3.3	3.4	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|288559592|ref|YP_003423078.1|	-	0.03	14.9	23.5	0.55	10.8	22.0	3.1	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|288559592|ref|YP_003423078.1|	-	0.043	14.0	24.9	2.4	8.4	5.8	3.5	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|288559592|ref|YP_003423078.1|	-	0.25	12.3	20.5	0.34	11.9	2.9	3.7	3	0	0	3	3	3	0	4Fe-4S	double	cluster	binding	domain
MobB	PF03205.14	gi|288559593|ref|YP_003423079.1|	-	2.2e-27	95.5	0.1	3e-27	95.1	0.1	1.2	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
CbiA	PF01656.23	gi|288559593|ref|YP_003423079.1|	-	0.006	16.6	0.0	0.0087	16.1	0.0	1.3	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_14	PF13173.6	gi|288559593|ref|YP_003423079.1|	-	0.0071	16.4	0.1	0.014	15.4	0.1	1.6	1	0	0	1	1	1	1	AAA	domain
MMR_HSR1	PF01926.23	gi|288559593|ref|YP_003423079.1|	-	0.0087	16.1	0.1	0.022	14.8	0.0	1.7	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
6PF2K	PF01591.18	gi|288559593|ref|YP_003423079.1|	-	0.031	13.6	0.0	0.061	12.6	0.0	1.5	1	0	0	1	1	1	0	6-phosphofructo-2-kinase
DUF2117	PF09890.9	gi|288559593|ref|YP_003423079.1|	-	0.091	12.2	2.0	3	7.3	0.1	2.3	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2117)
AAA_16	PF13191.6	gi|288559593|ref|YP_003423079.1|	-	0.18	12.2	0.0	0.33	11.3	0.0	1.5	1	0	0	1	1	1	0	AAA	ATPase	domain
SIN1_PH	PF16979.5	gi|288559594|ref|YP_003423080.1|	-	0.013	15.8	0.0	0.014	15.7	0.0	1.1	1	0	0	1	1	1	0	SAPK-interacting	protein	1	(Sin1),	Pleckstrin-homology
Radical_SAM	PF04055.21	gi|288559595|ref|YP_003423081.1|	-	4e-30	105.4	0.6	7.3e-30	104.5	0.3	1.6	2	0	0	2	2	2	1	Radical	SAM	superfamily
Mob_synth_C	PF06463.13	gi|288559595|ref|YP_003423081.1|	-	1.2e-22	80.2	0.1	1.9e-22	79.6	0.1	1.3	1	0	0	1	1	1	1	Molybdenum	Cofactor	Synthesis	C
Fer4_12	PF13353.6	gi|288559595|ref|YP_003423081.1|	-	2.7e-09	37.4	0.0	7.9e-09	35.9	0.0	1.8	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|288559595|ref|YP_003423081.1|	-	6.5e-07	29.5	0.3	8.3e-06	25.9	0.0	2.4	2	1	0	2	2	2	1	4Fe-4S	single	cluster	domain
DUF3783	PF12646.7	gi|288559595|ref|YP_003423081.1|	-	0.097	12.6	1.2	0.45	10.5	0.8	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3783)
CMD	PF02627.20	gi|288559595|ref|YP_003423081.1|	-	0.13	12.3	0.0	0.56	10.3	0.0	1.9	2	0	0	2	2	2	0	Carboxymuconolactone	decarboxylase	family
Beta_helix	PF13229.6	gi|288559596|ref|YP_003423082.1|	-	4.7e-14	52.5	86.6	1.3e-07	31.6	25.8	12.7	3	3	9	13	13	9	7	Right	handed	beta	helix	region
Big_3_5	PF16640.5	gi|288559596|ref|YP_003423082.1|	-	6.7e-10	39.0	10.2	5.8e-09	36.0	8.9	10.1	11	0	0	11	11	8	3	Bacterial	Ig-like	domain	(group	3)
Chlam_PMP	PF02415.17	gi|288559596|ref|YP_003423082.1|	-	1.9e-08	34.2	198.6	0.087	13.3	0.3	30.8	30	2	0	30	30	26	11	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
Big_1	PF02369.16	gi|288559596|ref|YP_003423082.1|	-	3.1e-07	30.3	6.5	3.1e-05	23.9	6.4	7.1	7	0	0	7	7	5	2	Bacterial	Ig-like	domain	(group	1)
WEMBL	PF05701.11	gi|288559596|ref|YP_003423082.1|	-	8.5e-07	28.0	28.1	0.0046	15.7	6.4	3.3	1	1	2	3	3	3	3	Weak	chloroplast	movement	under	blue	light
AAA_13	PF13166.6	gi|288559596|ref|YP_003423082.1|	-	0.00013	20.8	29.0	0.00026	19.8	29.0	1.4	1	0	0	1	1	1	1	AAA	domain
DUF2564	PF10819.8	gi|288559596|ref|YP_003423082.1|	-	0.00032	21.0	34.9	0.24	11.8	3.9	5.5	1	1	4	5	5	5	3	Protein	of	unknown	function	(DUF2564)
DUF745	PF05335.13	gi|288559596|ref|YP_003423082.1|	-	0.0015	18.2	36.9	0.006	16.3	19.3	3.1	1	1	2	3	3	3	2	Protein	of	unknown	function	(DUF745)
EzrA	PF06160.12	gi|288559596|ref|YP_003423082.1|	-	0.0017	16.6	32.6	0.032	12.4	32.9	2.0	1	1	1	2	2	2	1	Septation	ring	formation	regulator,	EzrA
CENP-F_leu_zip	PF10473.9	gi|288559596|ref|YP_003423082.1|	-	0.0046	17.0	27.6	0.076	13.0	6.9	3.2	1	1	2	3	3	3	2	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
DASH_Duo1	PF08651.10	gi|288559596|ref|YP_003423082.1|	-	0.0089	15.8	33.0	0.14	11.9	3.1	5.8	2	1	4	6	6	6	2	DASH	complex	subunit	Duo1
TSC22	PF01166.18	gi|288559596|ref|YP_003423082.1|	-	0.049	13.9	0.9	0.23	11.8	0.9	2.1	1	0	0	1	1	1	0	TSC-22/dip/bun	family
FH2	PF02181.23	gi|288559596|ref|YP_003423082.1|	-	0.063	12.4	15.4	0.63	9.1	3.0	2.5	1	1	1	2	2	2	0	Formin	Homology	2	Domain
YbbR	PF07949.12	gi|288559596|ref|YP_003423082.1|	-	0.16	12.3	9.8	0.34	11.3	1.6	5.0	3	0	0	3	3	2	0	YbbR-like	protein
Tektin	PF03148.14	gi|288559596|ref|YP_003423082.1|	-	0.2	10.4	24.9	0.062	12.0	3.8	2.2	2	0	0	2	2	2	0	Tektin	family
ERM	PF00769.19	gi|288559596|ref|YP_003423082.1|	-	0.23	11.2	28.0	0.12	12.2	17.3	2.2	1	1	1	2	2	2	0	Ezrin/radixin/moesin	family
DUF1664	PF07889.12	gi|288559596|ref|YP_003423082.1|	-	0.25	11.4	24.6	2.4	8.2	5.0	3.8	1	1	3	4	4	4	0	Protein	of	unknown	function	(DUF1664)
HOOK	PF05622.12	gi|288559596|ref|YP_003423082.1|	-	0.26	9.4	31.1	1.8	6.6	14.2	2.3	1	1	1	2	2	2	0	HOOK	protein
GAS	PF13851.6	gi|288559596|ref|YP_003423082.1|	-	0.26	10.6	32.3	1.3	8.4	12.8	2.9	1	1	0	2	2	2	0	Growth-arrest	specific	micro-tubule	binding
Tropomyosin	PF00261.20	gi|288559596|ref|YP_003423082.1|	-	0.28	10.5	29.7	1.1	8.6	23.7	3.0	1	1	1	2	2	2	0	Tropomyosin
Cas9_b_hairpin	PF17893.1	gi|288559596|ref|YP_003423082.1|	-	0.29	11.0	2.2	1.4	8.8	0.0	3.2	4	0	0	4	4	2	0	CRISPR-associated	endonuclease	Cas9	beta-hairpin	domain
Spc7	PF08317.11	gi|288559596|ref|YP_003423082.1|	-	0.29	10.0	31.9	1.5	7.6	19.9	2.2	1	1	1	2	2	2	0	Spc7	kinetochore	protein
I-set	PF07679.16	gi|288559596|ref|YP_003423082.1|	-	0.3	11.2	2.8	1.6	8.9	0.0	3.5	4	0	0	4	4	2	0	Immunoglobulin	I-set	domain
BST2	PF16716.5	gi|288559596|ref|YP_003423082.1|	-	0.55	10.9	37.8	1.5	9.5	9.5	3.6	1	1	3	4	4	4	0	Bone	marrow	stromal	antigen	2
DUF812	PF05667.11	gi|288559596|ref|YP_003423082.1|	-	0.64	8.8	34.1	1.1	8.0	25.8	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF812)
FPP	PF05911.11	gi|288559596|ref|YP_003423082.1|	-	0.67	8.1	27.8	4.8	5.2	28.0	1.6	1	1	1	2	2	2	0	Filament-like	plant	protein,	long	coiled-coil
Myosin_tail_1	PF01576.19	gi|288559596|ref|YP_003423082.1|	-	1.1	6.9	25.1	2.3	5.9	25.1	1.4	1	1	0	1	1	1	0	Myosin	tail
Tropomyosin_1	PF12718.7	gi|288559596|ref|YP_003423082.1|	-	1.3	9.1	35.5	5.3	7.2	10.9	2.9	1	1	2	3	3	3	0	Tropomyosin	like
Filament	PF00038.21	gi|288559596|ref|YP_003423082.1|	-	1.4	8.5	25.4	2	7.9	7.4	3.1	1	1	2	3	3	3	0	Intermediate	filament	protein
MscS_porin	PF12795.7	gi|288559596|ref|YP_003423082.1|	-	2.6	7.5	48.1	12	5.3	29.9	2.2	1	1	1	2	2	2	0	Mechanosensitive	ion	channel	porin	domain
TMPIT	PF07851.13	gi|288559596|ref|YP_003423082.1|	-	2.8	7.1	20.2	1.8	7.7	6.2	2.5	1	1	1	2	2	2	0	TMPIT-like	protein
Laminin_I	PF06008.14	gi|288559596|ref|YP_003423082.1|	-	3.1	7.4	42.8	0.27	10.9	24.9	2.2	1	1	1	2	2	2	0	Laminin	Domain	I
Laminin_II	PF06009.12	gi|288559596|ref|YP_003423082.1|	-	4.2	7.4	38.6	9.3	6.3	7.6	3.6	1	1	2	3	3	3	0	Laminin	Domain	II
COG2	PF06148.11	gi|288559596|ref|YP_003423082.1|	-	4.2	7.4	16.5	0.85	9.7	2.7	3.3	1	1	2	3	3	3	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
COG5	PF10392.9	gi|288559596|ref|YP_003423082.1|	-	5.1	7.3	22.5	1.6	8.9	11.1	2.4	1	1	1	2	2	2	0	Golgi	transport	complex	subunit	5
CCDC144C	PF14915.6	gi|288559596|ref|YP_003423082.1|	-	5.4	6.0	29.3	3.2	6.8	7.7	2.2	1	1	1	2	2	2	0	CCDC144C	protein	coiled-coil	region
Leptin	PF02024.15	gi|288559596|ref|YP_003423082.1|	-	5.8	6.7	11.3	6.9	6.4	4.2	2.8	1	1	1	2	2	2	0	Leptin
GldM_N	PF12081.8	gi|288559596|ref|YP_003423082.1|	-	8.4	6.4	30.2	5.1	7.1	12.7	2.7	1	1	1	2	2	2	0	GldM	N-terminal	domain
TolA_bind_tri	PF16331.5	gi|288559596|ref|YP_003423082.1|	-	8.7	6.5	26.1	2.7	8.2	0.1	4.2	2	1	2	4	4	4	0	TolA	binding	protein	trimerisation
YqgF	PF14639.6	gi|288559596|ref|YP_003423082.1|	-	9.2	6.0	18.1	2.2	8.1	3.1	3.4	2	1	1	3	3	2	0	Holliday-junction	resolvase-like	of	SPT6
HTH_3	PF01381.22	gi|288559597|ref|YP_003423083.1|	-	2.6e-09	37.0	0.2	8.7e-09	35.3	0.1	1.8	2	0	0	2	2	2	1	Helix-turn-helix
Fer4	PF00037.27	gi|288559597|ref|YP_003423083.1|	-	7.1e-09	35.1	16.8	0.00026	20.7	2.9	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|288559597|ref|YP_003423083.1|	-	6.9e-08	32.5	23.4	4.3e-05	23.6	14.9	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|288559597|ref|YP_003423083.1|	-	1.7e-07	31.7	11.2	2.6e-07	31.1	11.2	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
HTH_19	PF12844.7	gi|288559597|ref|YP_003423083.1|	-	2.3e-07	30.7	0.1	4.8e-07	29.7	0.1	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
Fer4_9	PF13187.6	gi|288559597|ref|YP_003423083.1|	-	5.4e-06	26.5	10.0	8.7e-06	25.8	10.0	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
HTH_38	PF13936.6	gi|288559597|ref|YP_003423083.1|	-	4e-05	23.3	0.1	8.1e-05	22.3	0.1	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_31	PF13560.6	gi|288559597|ref|YP_003423083.1|	-	0.00013	22.3	0.0	0.00018	21.8	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
Fer4_10	PF13237.6	gi|288559597|ref|YP_003423083.1|	-	0.00051	20.1	14.0	0.0013	18.8	14.1	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
HTH_23	PF13384.6	gi|288559597|ref|YP_003423083.1|	-	0.00068	19.4	0.0	0.0012	18.6	0.0	1.3	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_26	PF13443.6	gi|288559597|ref|YP_003423083.1|	-	0.0017	18.8	0.0	0.0039	17.6	0.0	1.6	2	0	0	2	2	1	1	Cro/C1-type	HTH	DNA-binding	domain
Fer4_16	PF13484.6	gi|288559597|ref|YP_003423083.1|	-	0.0022	18.9	11.4	0.083	13.8	1.1	2.3	1	1	1	2	2	2	1	4Fe-4S	double	cluster	binding	domain
HTH_24	PF13412.6	gi|288559597|ref|YP_003423083.1|	-	0.0037	16.8	0.0	0.0078	15.7	0.0	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_5	PF01022.20	gi|288559597|ref|YP_003423083.1|	-	0.0085	15.9	0.0	0.021	14.7	0.0	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_40	PF14493.6	gi|288559597|ref|YP_003423083.1|	-	0.0086	16.5	0.0	0.018	15.5	0.1	1.7	2	1	0	2	2	1	1	Helix-turn-helix	domain
HTH_35	PF13693.6	gi|288559597|ref|YP_003423083.1|	-	0.0093	16.0	0.0	0.014	15.4	0.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
RepB	PF07506.11	gi|288559597|ref|YP_003423083.1|	-	0.016	15.3	0.0	0.023	14.8	0.0	1.2	1	0	0	1	1	1	0	RepB	plasmid	partitioning	protein
Sigma70_r4_2	PF08281.12	gi|288559597|ref|YP_003423083.1|	-	0.016	14.8	0.3	0.037	13.7	0.1	1.8	2	0	0	2	2	1	0	Sigma-70,	region	4
Fer4_4	PF12800.7	gi|288559597|ref|YP_003423083.1|	-	0.017	15.6	2.2	0.017	15.6	2.2	2.2	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|288559597|ref|YP_003423083.1|	-	0.023	14.8	1.9	0.023	14.8	1.9	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
HTH_37	PF13744.6	gi|288559597|ref|YP_003423083.1|	-	0.035	14.1	0.0	0.067	13.2	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
Fer4_6	PF12837.7	gi|288559597|ref|YP_003423083.1|	-	0.045	13.8	17.2	0.35	11.0	3.4	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
HTH_28	PF13518.6	gi|288559597|ref|YP_003423083.1|	-	0.053	13.6	0.0	0.099	12.8	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_IclR	PF09339.10	gi|288559597|ref|YP_003423083.1|	-	0.061	13.1	0.0	0.092	12.6	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HNF-1_N	PF04814.13	gi|288559597|ref|YP_003423083.1|	-	0.062	13.9	0.0	0.099	13.3	0.0	1.2	1	0	0	1	1	1	0	Hepatocyte	nuclear	factor	1	(HNF-1),	N	terminus
Fer4_22	PF17179.4	gi|288559597|ref|YP_003423083.1|	-	0.076	13.9	11.5	0.22	12.4	1.2	2.2	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
MarR_2	PF12802.7	gi|288559597|ref|YP_003423083.1|	-	0.077	12.9	0.0	0.13	12.2	0.0	1.3	1	0	0	1	1	1	0	MarR	family
Fer4_17	PF13534.6	gi|288559597|ref|YP_003423083.1|	-	0.077	13.5	15.3	0.37	11.4	1.1	2.3	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
HTH_11	PF08279.12	gi|288559597|ref|YP_003423083.1|	-	0.11	12.4	0.0	0.24	11.4	0.0	1.6	1	0	0	1	1	1	0	HTH	domain
TnsD	PF15978.5	gi|288559597|ref|YP_003423083.1|	-	0.13	11.2	0.0	0.17	10.8	0.0	1.2	1	0	0	1	1	1	0	Tn7-like	transposition	protein	D
Fer4_15	PF13459.6	gi|288559597|ref|YP_003423083.1|	-	0.25	12.1	0.9	0.25	12.1	0.9	2.6	3	0	0	3	3	2	0	4Fe-4S	single	cluster	domain
Fer4_8	PF13183.6	gi|288559597|ref|YP_003423083.1|	-	0.26	11.8	15.2	0.25	11.8	0.9	2.3	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|288559597|ref|YP_003423083.1|	-	6.7	7.3	17.8	0.32	11.6	3.4	2.7	2	1	1	3	3	3	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_18	PF13746.6	gi|288559597|ref|YP_003423083.1|	-	8	6.7	14.1	1.9	8.7	2.3	2.2	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|288559598|ref|YP_003423084.1|	-	2.3e-53	176.0	92.6	7.8e-08	31.8	2.8	8.4	8	0	0	8	8	8	8	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|288559598|ref|YP_003423084.1|	-	6.7e-42	141.9	109.6	7.4e-11	42.5	5.3	5.7	2	2	4	7	7	7	7	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|288559598|ref|YP_003423084.1|	-	3.9e-34	116.6	67.6	3.9e-08	33.3	13.6	6.2	5	1	1	6	6	6	6	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|288559598|ref|YP_003423084.1|	-	1.1e-31	108.6	72.7	3e-08	33.6	14.4	6.9	4	2	3	7	7	7	7	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|288559598|ref|YP_003423084.1|	-	5.5e-29	100.1	68.1	3.9e-08	33.3	10.6	5.9	4	2	2	6	6	6	6	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|288559598|ref|YP_003423084.1|	-	1.4e-28	97.7	87.1	0.00023	21.1	3.5	8.5	8	0	0	8	8	8	8	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|288559598|ref|YP_003423084.1|	-	4.8e-28	97.9	64.9	1e-06	29.6	6.5	7.8	5	2	3	8	8	8	8	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.7	gi|288559598|ref|YP_003423084.1|	-	9.3e-24	82.0	79.4	0.00059	19.8	3.0	9.0	9	0	0	9	9	9	8	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|288559598|ref|YP_003423084.1|	-	2.1e-15	56.9	69.6	5.1e-05	23.6	7.8	6.2	2	2	5	7	7	7	7	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|288559598|ref|YP_003423084.1|	-	5.9e-13	48.2	79.7	0.0026	18.2	1.3	8.8	9	0	0	9	9	9	8	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|288559598|ref|YP_003423084.1|	-	2.9e-11	43.7	72.3	0.00014	22.4	7.2	7.4	4	3	4	8	8	8	6	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|288559598|ref|YP_003423084.1|	-	3.2e-06	27.7	101.3	0.0091	16.9	6.3	8.6	8	0	0	8	8	8	6	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|288559598|ref|YP_003423084.1|	-	5.8e-06	26.8	84.7	0.015	15.8	3.5	8.6	8	0	0	8	8	8	5	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
ETF_QO	PF05187.13	gi|288559598|ref|YP_003423084.1|	-	0.00018	21.6	43.2	0.18	12.0	0.7	6.5	1	1	6	7	7	7	3	Electron	transfer	flavoprotein-ubiquinone	oxidoreductase,	4Fe-4S
Fer4_15	PF13459.6	gi|288559598|ref|YP_003423084.1|	-	0.0018	19.0	71.8	0.021	15.5	1.4	9.0	7	3	1	8	8	8	3	4Fe-4S	single	cluster	domain
Fer4_22	PF17179.4	gi|288559598|ref|YP_003423084.1|	-	0.0019	19.0	69.5	0.03	15.2	1.3	8.3	5	3	5	10	10	9	3	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|288559598|ref|YP_003423084.1|	-	1.8	8.8	69.5	1.1	9.5	2.2	7.6	2	1	4	7	7	7	0	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|288559599|ref|YP_003423085.1|	-	3.9e-17	61.3	10.9	3.2e-09	36.2	3.6	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|288559599|ref|YP_003423085.1|	-	4.6e-13	48.6	11.1	1.2e-07	31.5	2.7	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|288559599|ref|YP_003423085.1|	-	2.1e-11	43.2	10.6	2.6e-06	27.2	2.2	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|288559599|ref|YP_003423085.1|	-	3e-10	40.5	7.0	2.5e-05	24.8	1.9	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|288559599|ref|YP_003423085.1|	-	3.9e-10	39.7	19.4	1.5e-07	31.5	9.7	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|288559599|ref|YP_003423085.1|	-	2.6e-09	37.1	12.6	5.8e-08	32.7	12.8	2.0	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|288559599|ref|YP_003423085.1|	-	4e-09	36.5	8.2	2.2e-05	24.5	2.8	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|288559599|ref|YP_003423085.1|	-	1e-08	35.0	14.1	2.9e-06	27.3	1.8	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|288559599|ref|YP_003423085.1|	-	4.9e-08	33.8	7.3	0.0011	19.9	0.3	2.1	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_8	PF13183.6	gi|288559599|ref|YP_003423085.1|	-	2.2e-06	28.0	7.7	3.9e-06	27.2	7.7	1.4	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|288559599|ref|YP_003423085.1|	-	3.3e-06	27.5	6.2	6.3e-06	26.6	6.2	1.4	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|288559599|ref|YP_003423085.1|	-	0.00026	21.4	12.7	0.0032	18.0	2.3	2.2	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_22	PF17179.4	gi|288559599|ref|YP_003423085.1|	-	0.0017	19.2	12.1	0.069	14.0	1.7	2.1	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|288559599|ref|YP_003423085.1|	-	0.0021	18.8	0.2	0.0021	18.8	0.2	2.6	2	1	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_3	PF12798.7	gi|288559599|ref|YP_003423085.1|	-	0.0036	18.1	19.3	0.037	15.0	7.1	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
MTHFR_C	PF12225.8	gi|288559599|ref|YP_003423085.1|	-	0.099	12.3	6.4	1.3	8.7	0.8	2.1	2	0	0	2	2	2	0	Methylene-tetrahydrofolate	reductase	C	terminal
Fer4_18	PF13746.6	gi|288559599|ref|YP_003423085.1|	-	0.12	12.6	10.7	1.7	8.9	3.4	2.0	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
ETF_QO	PF05187.13	gi|288559599|ref|YP_003423085.1|	-	0.9	9.7	4.2	4.3	7.5	0.5	2.1	2	0	0	2	2	2	0	Electron	transfer	flavoprotein-ubiquinone	oxidoreductase,	4Fe-4S
Molydop_binding	PF01568.21	gi|288559600|ref|YP_003423086.1|	-	2.4e-12	46.9	0.0	3.1e-12	46.5	0.0	1.2	1	0	0	1	1	1	1	Molydopterin	dinucleotide	binding	domain
CDC48_N	PF02359.18	gi|288559600|ref|YP_003423086.1|	-	0.029	14.6	0.0	0.051	13.7	0.0	1.4	1	0	0	1	1	1	0	Cell	division	protein	48	(CDC48),	N-terminal	domain
Molybdopterin	PF00384.22	gi|288559601|ref|YP_003423087.1|	-	4.7e-18	65.4	0.0	6.2e-11	41.9	0.0	2.2	2	0	0	2	2	2	2	Molybdopterin	oxidoreductase
Amidohydro_3	PF07969.11	gi|288559602|ref|YP_003423088.1|	-	6.6e-74	250.1	0.0	7.6e-74	249.9	0.0	1.0	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_1	PF01979.20	gi|288559602|ref|YP_003423088.1|	-	2.1e-05	24.0	0.0	0.0049	16.2	0.0	2.7	3	0	0	3	3	3	2	Amidohydrolase	family
GXGXG	PF01493.19	gi|288559603|ref|YP_003423089.1|	-	8.5e-09	35.3	18.9	8.3e-06	25.5	14.8	3.4	1	1	1	2	2	2	2	GXGXG	motif
DUF2097	PF09870.9	gi|288559604|ref|YP_003423090.1|	-	1.2e-30	105.6	0.5	1.3e-30	105.4	0.5	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2097)
VASP_tetra	PF08776.11	gi|288559604|ref|YP_003423090.1|	-	0.12	12.0	1.2	1	9.0	0.1	2.4	2	0	0	2	2	2	0	VASP	tetramerisation	domain
DUF2097	PF09870.9	gi|288559605|ref|YP_003423091.1|	-	1.1e-31	108.9	1.7	1.2e-31	108.7	1.7	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2097)
ABC_tran	PF00005.27	gi|288559606|ref|YP_003423092.1|	-	5.5e-31	107.9	0.0	8.8e-31	107.2	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
SMC_N	PF02463.19	gi|288559606|ref|YP_003423092.1|	-	7.3e-05	22.3	0.2	0.0012	18.4	0.2	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_21	PF13304.6	gi|288559606|ref|YP_003423092.1|	-	8.3e-05	22.5	0.8	0.039	13.8	0.0	2.4	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA	PF00004.29	gi|288559606|ref|YP_003423092.1|	-	0.0035	17.8	0.0	0.064	13.7	0.0	2.2	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_23	PF13476.6	gi|288559606|ref|YP_003423092.1|	-	0.007	16.9	1.1	0.011	16.2	0.7	1.6	1	1	0	1	1	1	1	AAA	domain
Rad17	PF03215.15	gi|288559606|ref|YP_003423092.1|	-	0.015	15.2	0.0	0.034	14.1	0.0	1.5	1	0	0	1	1	1	0	Rad17	P-loop	domain
AAA_22	PF13401.6	gi|288559606|ref|YP_003423092.1|	-	0.041	14.1	0.8	0.09	13.0	0.8	1.8	1	1	0	1	1	1	0	AAA	domain
RsgA_GTPase	PF03193.16	gi|288559606|ref|YP_003423092.1|	-	0.093	12.6	0.0	0.18	11.7	0.0	1.4	1	0	0	1	1	1	0	RsgA	GTPase
KdpD	PF02702.17	gi|288559606|ref|YP_003423092.1|	-	0.15	11.5	0.0	0.41	10.1	0.0	1.7	1	1	1	2	2	2	0	Osmosensitive	K+	channel	His	kinase	sensor	domain
SbcCD_C	PF13558.6	gi|288559606|ref|YP_003423092.1|	-	1.6	9.0	3.7	2.7	8.3	0.4	2.6	2	1	0	2	2	2	0	Putative	exonuclease	SbcCD,	C	subunit
NRD1_2	PF01995.16	gi|288559607|ref|YP_003423093.1|	-	2.1e-153	508.4	11.4	2.2e-81	272.6	3.6	2.1	2	0	0	2	2	2	2	NrpR	regulatory	domains	NRD1	and	2
HTH_12	PF08461.10	gi|288559607|ref|YP_003423093.1|	-	6.3e-27	93.3	0.7	6.3e-27	93.3	0.7	2.8	3	0	0	3	3	3	1	Ribonuclease	R	winged-helix	domain
HTH_11	PF08279.12	gi|288559607|ref|YP_003423093.1|	-	0.043	13.8	1.1	1.8	8.6	0.1	3.1	2	1	0	2	2	2	0	HTH	domain
Ribosomal_S19e	PF01090.19	gi|288559607|ref|YP_003423093.1|	-	0.15	11.8	0.5	0.45	10.2	0.0	2.0	2	0	0	2	2	2	0	Ribosomal	protein	S19e
Gln-synt_C	PF00120.24	gi|288559608|ref|YP_003423094.1|	-	5.8e-125	416.8	0.0	6.9e-125	416.6	0.0	1.0	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.19	gi|288559608|ref|YP_003423094.1|	-	5e-28	96.6	0.0	3.1e-27	94.1	0.0	2.2	2	0	0	2	2	2	1	Glutamine	synthetase,	beta-Grasp	domain
AMP-binding	PF00501.28	gi|288559609|ref|YP_003423095.1|	-	0	1155.6	0.0	8.4e-87	291.5	0.0	5.0	5	0	0	5	5	5	4	AMP-binding	enzyme
Condensation	PF00668.20	gi|288559609|ref|YP_003423095.1|	-	4.4e-148	493.8	23.3	4.6e-50	170.6	0.4	5.3	5	0	0	5	5	5	4	Condensation	domain
NAD_binding_4	PF07993.12	gi|288559609|ref|YP_003423095.1|	-	1.5e-37	129.2	0.0	2.4e-37	128.5	0.0	1.3	1	0	0	1	1	1	1	Male	sterility	protein
AMP-binding_C	PF13193.6	gi|288559609|ref|YP_003423095.1|	-	1.5e-34	118.8	0.0	7e-08	33.3	0.0	4.7	4	0	0	4	4	4	4	AMP-binding	enzyme	C-terminal	domain
PP-binding	PF00550.25	gi|288559609|ref|YP_003423095.1|	-	1.4e-32	111.9	4.8	3.8e-08	33.5	0.1	4.9	4	0	0	4	4	4	4	Phosphopantetheine	attachment	site
Epimerase	PF01370.21	gi|288559609|ref|YP_003423095.1|	-	1.8e-14	53.8	0.0	8.3e-14	51.6	0.0	2.1	2	0	0	2	2	2	1	NAD	dependent	epimerase/dehydratase	family
3Beta_HSD	PF01073.19	gi|288559609|ref|YP_003423095.1|	-	1.1e-08	34.4	0.3	2.5e-08	33.3	0.3	1.6	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
HNF_C	PF09354.10	gi|288559609|ref|YP_003423095.1|	-	2.3e-05	25.3	0.1	12	7.0	0.0	4.0	3	0	0	3	3	3	2	HNF3	C-terminal	domain
OAS1_C	PF10421.9	gi|288559609|ref|YP_003423095.1|	-	7.3e-05	22.3	2.4	7.9	5.9	0.0	4.6	4	0	0	4	4	4	1	2'-5'-oligoadenylate	synthetase	1,	domain	2,	C-terminus
Polysacc_synt_2	PF02719.15	gi|288559609|ref|YP_003423095.1|	-	0.015	14.5	0.0	0.03	13.5	0.0	1.5	1	0	0	1	1	1	0	Polysaccharide	biosynthesis	protein
MatE	PF01554.18	gi|288559610|ref|YP_003423096.1|	-	1.9e-22	79.6	33.5	2.3e-13	50.1	9.6	2.8	2	1	0	2	2	2	2	MatE
Polysacc_synt_C	PF14667.6	gi|288559610|ref|YP_003423096.1|	-	5.3e-06	26.5	41.0	0.00023	21.2	17.1	4.2	3	1	1	4	4	4	2	Polysaccharide	biosynthesis	C-terminal	domain
DUF2663	PF10864.8	gi|288559610|ref|YP_003423096.1|	-	0.24	11.8	5.6	8.8	6.7	0.0	3.6	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2663)
ThiF	PF00899.21	gi|288559611|ref|YP_003423097.1|	-	2e-51	174.7	0.0	2.4e-51	174.5	0.0	1.0	1	0	0	1	1	1	1	ThiF	family
Sacchrp_dh_NADP	PF03435.18	gi|288559611|ref|YP_003423097.1|	-	9.6e-06	25.9	0.3	2.9e-05	24.3	0.3	1.8	1	1	0	1	1	1	1	Saccharopine	dehydrogenase	NADP	binding	domain
UDPG_MGDP_dh_N	PF03721.14	gi|288559611|ref|YP_003423097.1|	-	4e-05	23.3	0.1	5.9e-05	22.7	0.1	1.3	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
2-Hacid_dh_C	PF02826.19	gi|288559611|ref|YP_003423097.1|	-	0.0015	18.0	0.0	0.0021	17.4	0.0	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Shikimate_DH	PF01488.20	gi|288559611|ref|YP_003423097.1|	-	0.007	16.4	0.1	0.013	15.5	0.1	1.4	1	1	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
AlaDh_PNT_C	PF01262.21	gi|288559611|ref|YP_003423097.1|	-	0.04	13.2	0.0	0.082	12.2	0.0	1.5	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
3HCDH_N	PF02737.18	gi|288559611|ref|YP_003423097.1|	-	0.049	13.5	0.0	0.069	13.0	0.0	1.2	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Polysacc_synt_2	PF02719.15	gi|288559611|ref|YP_003423097.1|	-	0.052	12.7	0.0	0.074	12.2	0.0	1.2	1	0	0	1	1	1	0	Polysaccharide	biosynthesis	protein
Semialdhyde_dh	PF01118.24	gi|288559611|ref|YP_003423097.1|	-	0.053	14.0	1.8	1.5	9.3	0.0	2.5	2	0	0	2	2	2	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
TrkA_N	PF02254.18	gi|288559611|ref|YP_003423097.1|	-	0.092	13.0	0.1	0.47	10.7	0.1	2.1	2	0	0	2	2	2	0	TrkA-N	domain
NAD_binding_7	PF13241.6	gi|288559611|ref|YP_003423097.1|	-	0.097	13.1	0.0	0.23	11.9	0.0	1.6	2	0	0	2	2	2	0	Putative	NAD(P)-binding
Pyr_redox	PF00070.27	gi|288559611|ref|YP_003423097.1|	-	0.11	13.0	0.4	1.7	9.2	0.2	2.6	2	1	1	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
Ldh_1_N	PF00056.23	gi|288559611|ref|YP_003423097.1|	-	0.19	11.8	1.1	0.4	10.8	1.1	1.7	1	1	0	1	1	1	0	lactate/malate	dehydrogenase,	NAD	binding	domain
Aldo_ket_red	PF00248.21	gi|288559612|ref|YP_003423098.1|	-	1.2e-33	116.6	2.7	6.1e-32	111.0	2.7	2.0	1	1	0	1	1	1	1	Aldo/keto	reductase	family
Fer4_9	PF13187.6	gi|288559612|ref|YP_003423098.1|	-	3.4e-08	33.5	9.4	7.2e-08	32.5	9.4	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|288559612|ref|YP_003423098.1|	-	3.8e-07	30.6	10.4	3.8e-07	30.6	10.4	2.1	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|288559612|ref|YP_003423098.1|	-	0.00054	20.0	9.7	0.076	13.2	1.8	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|288559612|ref|YP_003423098.1|	-	0.0026	17.9	10.8	0.12	12.6	1.1	2.7	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|288559612|ref|YP_003423098.1|	-	0.0082	16.2	2.7	0.0082	16.2	2.7	2.5	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|288559612|ref|YP_003423098.1|	-	0.032	14.7	12.3	0.093	13.2	12.3	1.8	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|288559612|ref|YP_003423098.1|	-	0.048	14.3	13.0	0.18	12.4	13.1	1.9	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|288559612|ref|YP_003423098.1|	-	0.07	13.7	1.4	0.07	13.7	1.4	2.6	3	0	0	3	3	2	0	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|288559612|ref|YP_003423098.1|	-	0.094	12.8	15.1	0.062	13.4	2.2	2.4	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
DUF5624	PF18538.1	gi|288559612|ref|YP_003423098.1|	-	0.14	12.2	0.0	0.31	11.2	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5624)
Fer4	PF00037.27	gi|288559612|ref|YP_003423098.1|	-	0.21	11.4	12.6	0.087	12.7	1.4	2.7	2	1	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|288559612|ref|YP_003423098.1|	-	0.37	11.0	14.4	0.19	11.9	2.3	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_20	PF14691.6	gi|288559612|ref|YP_003423098.1|	-	0.57	10.0	7.1	0.16	11.7	0.6	2.3	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_16	PF13484.6	gi|288559612|ref|YP_003423098.1|	-	0.59	11.1	13.0	6.5	7.8	3.3	2.6	1	1	2	3	3	3	0	4Fe-4S	double	cluster	binding	domain
DDE_Tnp_1_6	PF13751.6	gi|288559613|ref|YP_003423099.1|	-	1.2e-19	70.8	1.1	5.1e-19	68.7	0.5	2.1	2	0	0	2	2	2	1	Transposase	DDE	domain
DDE_Tnp_1	PF01609.21	gi|288559613|ref|YP_003423099.1|	-	1.2e-11	44.6	0.8	7.4e-11	42.1	0.8	2.0	1	1	0	1	1	1	1	Transposase	DDE	domain
DUF772	PF05598.11	gi|288559613|ref|YP_003423099.1|	-	4.3e-06	26.7	0.0	1.1e-05	25.3	0.0	1.7	1	0	0	1	1	1	1	Transposase	domain	(DUF772)
Ion_trans_2	PF07885.16	gi|288559615|ref|YP_003423101.1|	-	6.1e-05	22.9	7.8	0.00011	22.0	7.8	1.4	1	0	0	1	1	1	1	Ion	channel
Multi_Drug_Res	PF00893.19	gi|288559616|ref|YP_003423102.1|	-	3.7e-24	85.2	7.0	4.5e-24	84.9	7.0	1.1	1	0	0	1	1	1	1	Small	Multidrug	Resistance	protein
TMEM234	PF10639.9	gi|288559616|ref|YP_003423102.1|	-	0.0017	18.4	0.8	0.0027	17.7	0.7	1.3	1	1	0	1	1	1	1	Putative	transmembrane	family	234
EamA	PF00892.20	gi|288559616|ref|YP_003423102.1|	-	0.0025	18.0	14.3	0.0036	17.5	14.3	1.3	1	1	0	1	1	1	1	EamA-like	transporter	family
UPF0060	PF02694.15	gi|288559616|ref|YP_003423102.1|	-	0.03	14.6	3.2	0.032	14.5	3.2	1.1	1	0	0	1	1	1	0	Uncharacterised	BCR,	YnfA/UPF0060	family
TssN	PF17555.2	gi|288559616|ref|YP_003423102.1|	-	0.9	8.9	5.2	1.5	8.2	5.2	1.2	1	0	0	1	1	1	0	Type	VI	secretion	system,	TssN
YlaH	PF14036.6	gi|288559616|ref|YP_003423102.1|	-	1.1	9.7	8.4	2.4	8.5	2.7	2.5	1	1	1	2	2	2	0	YlaH-like	protein
DUF4131	PF13567.6	gi|288559616|ref|YP_003423102.1|	-	3.5	7.3	8.8	1.1	8.9	4.2	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4131)
DUF3487	PF11990.8	gi|288559616|ref|YP_003423102.1|	-	4.4	7.2	7.5	2.6	7.9	5.5	1.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3487)
DUF996	PF06195.13	gi|288559616|ref|YP_003423102.1|	-	7.9	6.8	15.5	0.16	12.2	4.1	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF996)
HxlR	PF01638.17	gi|288559617|ref|YP_003423103.1|	-	1.1e-18	66.8	0.2	1.7e-18	66.2	0.2	1.3	1	1	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_45	PF14947.6	gi|288559617|ref|YP_003423103.1|	-	5.5e-05	23.1	3.9	0.0001	22.2	1.3	2.1	1	1	1	2	2	2	1	Winged	helix-turn-helix
DUF4364	PF14277.6	gi|288559617|ref|YP_003423103.1|	-	0.00022	21.0	2.1	0.00027	20.7	2.1	1.4	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
PAS	PF00989.25	gi|288559617|ref|YP_003423103.1|	-	0.0032	17.5	0.1	0.0056	16.7	0.1	1.4	1	1	0	1	1	1	1	PAS	fold
PadR	PF03551.14	gi|288559617|ref|YP_003423103.1|	-	0.0097	15.9	1.3	0.019	14.9	0.1	1.9	2	0	0	2	2	2	1	Transcriptional	regulator	PadR-like	family
DUF3116	PF11313.8	gi|288559617|ref|YP_003423103.1|	-	0.01	15.7	0.6	0.02	14.7	0.3	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3116)
Replic_Relax	PF13814.6	gi|288559617|ref|YP_003423103.1|	-	0.022	14.8	0.0	0.027	14.5	0.0	1.2	1	0	0	1	1	1	0	Replication-relaxation
CbiA	PF01656.23	gi|288559618|ref|YP_003423104.1|	-	4.5e-09	36.4	0.0	7.4e-09	35.7	0.0	1.4	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.6	gi|288559618|ref|YP_003423104.1|	-	2.9e-06	27.3	1.5	4.7e-06	26.6	0.7	1.9	1	1	1	2	2	2	1	AAA	domain
CBP_BcsQ	PF06564.12	gi|288559618|ref|YP_003423104.1|	-	1.9e-05	24.3	0.0	0.073	12.5	0.0	2.4	2	1	1	3	3	3	2	Cellulose	biosynthesis	protein	BcsQ
ParA	PF10609.9	gi|288559618|ref|YP_003423104.1|	-	0.00025	20.6	1.3	0.0035	16.8	0.4	2.3	2	0	0	2	2	2	1	NUBPL	iron-transfer	P-loop	NTPase
SRP54	PF00448.22	gi|288559618|ref|YP_003423104.1|	-	0.00028	20.6	0.2	0.22	11.1	0.1	2.3	2	0	0	2	2	2	2	SRP54-type	protein,	GTPase	domain
MMR_HSR1	PF01926.23	gi|288559618|ref|YP_003423104.1|	-	0.00036	20.6	0.4	1.1	9.4	0.0	2.4	2	0	0	2	2	2	2	50S	ribosome-binding	GTPase
ABC_tran	PF00005.27	gi|288559618|ref|YP_003423104.1|	-	0.00044	20.8	1.2	0.00077	20.0	0.3	2.0	2	1	0	2	2	2	1	ABC	transporter
AAA_24	PF13479.6	gi|288559618|ref|YP_003423104.1|	-	0.00045	20.0	0.7	0.00088	19.0	0.2	1.9	1	1	0	1	1	1	1	AAA	domain
DUF87	PF01935.17	gi|288559618|ref|YP_003423104.1|	-	0.00088	19.4	0.9	0.0017	18.5	0.1	1.8	2	0	0	2	2	2	1	Helicase	HerA,	central	domain
Zeta_toxin	PF06414.12	gi|288559618|ref|YP_003423104.1|	-	0.00088	18.6	0.0	0.0015	17.8	0.0	1.3	1	0	0	1	1	1	1	Zeta	toxin
ArsA_ATPase	PF02374.15	gi|288559618|ref|YP_003423104.1|	-	0.0013	18.0	1.1	0.0026	17.0	0.0	1.9	2	1	0	2	2	2	1	Anion-transporting	ATPase
AAA_14	PF13173.6	gi|288559618|ref|YP_003423104.1|	-	0.0047	17.0	0.2	0.015	15.3	0.1	1.9	2	0	0	2	2	2	1	AAA	domain
NTPase_1	PF03266.15	gi|288559618|ref|YP_003423104.1|	-	0.0052	16.7	0.6	0.027	14.4	0.1	2.1	2	0	0	2	2	2	1	NTPase
Fer4_NifH	PF00142.18	gi|288559618|ref|YP_003423104.1|	-	0.0079	15.7	3.3	0.13	11.7	0.4	2.2	1	1	1	2	2	2	1	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
CLP1_P	PF16575.5	gi|288559618|ref|YP_003423104.1|	-	0.0085	15.9	0.4	0.12	12.1	0.1	2.2	2	0	0	2	2	2	1	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
KAP_NTPase	PF07693.14	gi|288559618|ref|YP_003423104.1|	-	0.0092	15.3	0.1	0.016	14.4	0.1	1.3	1	0	0	1	1	1	1	KAP	family	P-loop	domain
Viral_helicase1	PF01443.18	gi|288559618|ref|YP_003423104.1|	-	0.015	15.0	0.0	0.023	14.4	0.0	1.3	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
MipZ	PF09140.11	gi|288559618|ref|YP_003423104.1|	-	0.016	14.5	0.0	0.62	9.3	0.0	2.2	2	0	0	2	2	2	0	ATPase	MipZ
RNA_helicase	PF00910.22	gi|288559618|ref|YP_003423104.1|	-	0.018	15.4	0.0	0.069	13.5	0.0	2.0	2	0	0	2	2	2	0	RNA	helicase
AAA_18	PF13238.6	gi|288559618|ref|YP_003423104.1|	-	0.021	15.4	0.4	0.086	13.4	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
ATP_bind_1	PF03029.17	gi|288559618|ref|YP_003423104.1|	-	0.023	14.5	0.7	0.037	13.8	0.1	1.9	2	1	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
Sigma54_activ_2	PF14532.6	gi|288559618|ref|YP_003423104.1|	-	0.024	14.7	0.2	2	8.6	0.1	2.2	2	0	0	2	2	2	0	Sigma-54	interaction	domain
MeaB	PF03308.16	gi|288559618|ref|YP_003423104.1|	-	0.028	13.4	0.2	0.94	8.4	0.0	2.1	2	0	0	2	2	2	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
Rad17	PF03215.15	gi|288559618|ref|YP_003423104.1|	-	0.032	14.1	0.0	0.079	12.9	0.0	1.7	2	0	0	2	2	2	0	Rad17	P-loop	domain
Methyltransf_25	PF13649.6	gi|288559618|ref|YP_003423104.1|	-	0.036	14.8	0.0	11	6.8	0.0	2.8	2	1	0	2	2	2	0	Methyltransferase	domain
RsgA_GTPase	PF03193.16	gi|288559618|ref|YP_003423104.1|	-	0.041	13.8	2.0	3	7.7	0.1	2.4	2	0	0	2	2	2	0	RsgA	GTPase
NB-ARC	PF00931.22	gi|288559618|ref|YP_003423104.1|	-	0.052	12.7	0.1	0.096	11.8	0.1	1.3	1	0	0	1	1	1	0	NB-ARC	domain
NACHT	PF05729.12	gi|288559618|ref|YP_003423104.1|	-	0.052	13.5	0.0	0.095	12.6	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
Methyltransf_12	PF08242.12	gi|288559618|ref|YP_003423104.1|	-	0.07	13.9	0.2	25	5.7	0.0	3.1	2	1	0	2	2	2	0	Methyltransferase	domain
AAA	PF00004.29	gi|288559618|ref|YP_003423104.1|	-	0.081	13.3	0.2	0.24	11.8	0.0	1.9	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
TauE	PF01925.19	gi|288559619|ref|YP_003423105.1|	-	1.4e-41	142.7	28.0	1.6e-41	142.5	28.0	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
UL41A	PF17591.2	gi|288559619|ref|YP_003423105.1|	-	4.1	7.6	7.8	1.1	9.3	1.8	3.0	3	0	0	3	3	3	0	Herpesvirus	UL41A
Fer4	PF00037.27	gi|288559620|ref|YP_003423106.1|	-	2.3e-10	39.9	9.0	7e-06	25.6	1.8	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|288559620|ref|YP_003423106.1|	-	2.7e-08	33.8	10.5	3.5e-08	33.5	10.5	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|288559620|ref|YP_003423106.1|	-	6.7e-08	33.0	11.4	1.6e-07	31.8	11.6	1.5	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|288559620|ref|YP_003423106.1|	-	6.8e-07	29.1	13.2	0.00071	19.5	3.4	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|288559620|ref|YP_003423106.1|	-	8.4e-06	25.8	12.4	1.3e-05	25.2	12.4	1.3	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|288559620|ref|YP_003423106.1|	-	9.1e-06	25.5	12.0	0.0039	17.2	1.7	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|288559620|ref|YP_003423106.1|	-	1.2e-05	26.1	7.6	0.012	16.5	0.4	2.1	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.7	gi|288559620|ref|YP_003423106.1|	-	0.00035	20.9	14.8	0.029	14.9	3.5	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|288559620|ref|YP_003423106.1|	-	0.0004	20.9	15.1	0.014	15.9	2.8	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|288559620|ref|YP_003423106.1|	-	0.00086	19.4	16.2	0.021	15.0	16.3	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|288559620|ref|YP_003423106.1|	-	0.003	18.4	16.4	0.13	13.2	3.3	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|288559620|ref|YP_003423106.1|	-	0.0064	16.9	15.5	0.07	13.6	3.0	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|288559620|ref|YP_003423106.1|	-	0.012	16.4	8.5	0.36	11.6	1.1	2.1	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.6	gi|288559620|ref|YP_003423106.1|	-	0.31	11.6	12.1	2.1	9.0	1.6	2.1	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_22	PF17179.4	gi|288559620|ref|YP_003423106.1|	-	1.1	10.1	14.5	1.2	10.0	3.9	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|288559620|ref|YP_003423106.1|	-	1.3	9.2	12.5	2	8.6	2.6	2.0	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Flavodoxin_3	PF12641.7	gi|288559621|ref|YP_003423107.1|	-	5.5e-12	45.7	0.6	3.6e-10	39.8	0.1	2.2	1	1	1	2	2	2	2	Flavodoxin	domain
Flavodoxin_5	PF12724.7	gi|288559621|ref|YP_003423107.1|	-	6.6e-05	23.2	0.0	8.3e-05	22.9	0.0	1.3	1	0	0	1	1	1	1	Flavodoxin	domain
Flavodoxin_1	PF00258.25	gi|288559621|ref|YP_003423107.1|	-	0.00092	19.4	0.1	0.0023	18.2	0.1	1.9	1	1	0	1	1	1	1	Flavodoxin
FMN_red	PF03358.15	gi|288559622|ref|YP_003423108.1|	-	6.4e-17	61.7	0.0	7.7e-17	61.5	0.0	1.2	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.17	gi|288559622|ref|YP_003423108.1|	-	2.6e-06	27.3	0.0	3.4e-06	26.9	0.0	1.1	1	0	0	1	1	1	1	Flavodoxin-like	fold
Flavodoxin_5	PF12724.7	gi|288559622|ref|YP_003423108.1|	-	0.002	18.3	0.0	0.22	11.8	0.0	2.2	1	1	1	2	2	2	2	Flavodoxin	domain
UPF0228	PF05727.11	gi|288559622|ref|YP_003423108.1|	-	0.03	14.1	0.7	0.048	13.5	0.7	1.3	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0228)
HTH_45	PF14947.6	gi|288559623|ref|YP_003423109.1|	-	3.9e-05	23.6	1.3	3.9e-05	23.6	1.3	2.0	2	0	0	2	2	2	1	Winged	helix-turn-helix
HTH_5	PF01022.20	gi|288559623|ref|YP_003423109.1|	-	8.8e-05	22.3	0.3	0.00016	21.5	0.3	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.7	gi|288559623|ref|YP_003423109.1|	-	0.0013	18.8	0.0	0.0021	18.1	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
Rio2_N	PF09202.11	gi|288559623|ref|YP_003423109.1|	-	0.013	15.7	1.5	0.017	15.3	0.4	1.8	2	0	0	2	2	2	0	Rio2,	N-terminal
HTH_34	PF13601.6	gi|288559623|ref|YP_003423109.1|	-	0.014	15.6	0.2	0.033	14.4	0.2	1.6	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
NPA	PF16469.5	gi|288559623|ref|YP_003423109.1|	-	0.034	14.7	1.9	0.071	13.7	1.9	1.5	1	0	0	1	1	1	0	Nematode	polyprotein	allergen	ABA-1
BLACT_WH	PF17778.1	gi|288559623|ref|YP_003423109.1|	-	0.058	13.4	0.5	0.17	11.9	0.5	1.8	1	1	0	1	1	1	0	Beta-lactamase	associated	winged	helix	domain
DUF2513	PF10711.9	gi|288559623|ref|YP_003423109.1|	-	0.072	13.4	0.5	0.31	11.4	0.1	2.1	2	0	0	2	2	2	0	Hypothetical	protein	(DUF2513)
Mrr_N	PF14338.6	gi|288559623|ref|YP_003423109.1|	-	0.097	12.8	0.1	0.28	11.4	0.1	1.8	1	0	0	1	1	1	0	Mrr	N-terminal	domain
DUF3666	PF12408.8	gi|288559623|ref|YP_003423109.1|	-	7.7	5.8	10.1	7.2	5.9	0.9	3.0	2	1	0	2	2	2	0	Ribose-5-phosphate	isomerase
ABC_membrane	PF00664.23	gi|288559624|ref|YP_003423110.1|	-	4e-35	121.8	33.6	1.5e-27	97.0	9.8	2.5	2	1	0	2	2	2	2	ABC	transporter	transmembrane	region
Virulence_RhuM	PF13310.6	gi|288559625|ref|YP_003423111.1|	-	8.8e-101	336.4	4.6	1.2e-100	336.0	4.6	1.1	1	0	0	1	1	1	1	Virulence	protein	RhuM	family
DUF4110	PF13422.6	gi|288559625|ref|YP_003423111.1|	-	0.091	12.9	0.2	0.26	11.4	0.2	1.8	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4110)
Multi_Drug_Res	PF00893.19	gi|288559627|ref|YP_003423113.1|	-	3.7e-24	85.2	7.0	4.5e-24	84.9	7.0	1.1	1	0	0	1	1	1	1	Small	Multidrug	Resistance	protein
TMEM234	PF10639.9	gi|288559627|ref|YP_003423113.1|	-	0.0017	18.4	0.8	0.0027	17.7	0.7	1.3	1	1	0	1	1	1	1	Putative	transmembrane	family	234
EamA	PF00892.20	gi|288559627|ref|YP_003423113.1|	-	0.0025	18.0	14.3	0.0036	17.5	14.3	1.3	1	1	0	1	1	1	1	EamA-like	transporter	family
UPF0060	PF02694.15	gi|288559627|ref|YP_003423113.1|	-	0.03	14.6	3.2	0.032	14.5	3.2	1.1	1	0	0	1	1	1	0	Uncharacterised	BCR,	YnfA/UPF0060	family
TssN	PF17555.2	gi|288559627|ref|YP_003423113.1|	-	0.9	8.9	5.2	1.5	8.2	5.2	1.2	1	0	0	1	1	1	0	Type	VI	secretion	system,	TssN
YlaH	PF14036.6	gi|288559627|ref|YP_003423113.1|	-	1.1	9.7	8.4	2.4	8.5	2.7	2.5	1	1	1	2	2	2	0	YlaH-like	protein
DUF4131	PF13567.6	gi|288559627|ref|YP_003423113.1|	-	3.5	7.3	8.8	1.1	8.9	4.2	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4131)
DUF3487	PF11990.8	gi|288559627|ref|YP_003423113.1|	-	4.4	7.2	7.5	2.6	7.9	5.5	1.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3487)
DUF996	PF06195.13	gi|288559627|ref|YP_003423113.1|	-	7.9	6.8	15.5	0.16	12.2	4.1	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF996)
HxlR	PF01638.17	gi|288559628|ref|YP_003423114.1|	-	1.1e-18	66.8	0.2	1.7e-18	66.2	0.2	1.3	1	1	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_45	PF14947.6	gi|288559628|ref|YP_003423114.1|	-	5.5e-05	23.1	3.9	0.0001	22.2	1.3	2.1	1	1	1	2	2	2	1	Winged	helix-turn-helix
DUF4364	PF14277.6	gi|288559628|ref|YP_003423114.1|	-	0.00022	21.0	2.1	0.00027	20.7	2.1	1.4	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
PAS	PF00989.25	gi|288559628|ref|YP_003423114.1|	-	0.0032	17.5	0.1	0.0056	16.7	0.1	1.4	1	1	0	1	1	1	1	PAS	fold
PadR	PF03551.14	gi|288559628|ref|YP_003423114.1|	-	0.0097	15.9	1.3	0.019	14.9	0.1	1.9	2	0	0	2	2	2	1	Transcriptional	regulator	PadR-like	family
DUF3116	PF11313.8	gi|288559628|ref|YP_003423114.1|	-	0.01	15.7	0.6	0.02	14.7	0.3	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3116)
Replic_Relax	PF13814.6	gi|288559628|ref|YP_003423114.1|	-	0.022	14.8	0.0	0.027	14.5	0.0	1.2	1	0	0	1	1	1	0	Replication-relaxation
CbiA	PF01656.23	gi|288559629|ref|YP_003423115.1|	-	4.6e-09	36.4	0.0	7.4e-09	35.7	0.0	1.4	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.6	gi|288559629|ref|YP_003423115.1|	-	3.4e-06	27.1	2.0	4.3e-06	26.8	0.7	1.9	1	1	1	2	2	2	1	AAA	domain
CBP_BcsQ	PF06564.12	gi|288559629|ref|YP_003423115.1|	-	1.9e-05	24.3	0.0	0.073	12.5	0.0	2.4	2	1	1	3	3	3	2	Cellulose	biosynthesis	protein	BcsQ
ParA	PF10609.9	gi|288559629|ref|YP_003423115.1|	-	0.00027	20.5	1.2	0.0039	16.7	0.3	2.2	2	0	0	2	2	2	1	NUBPL	iron-transfer	P-loop	NTPase
SRP54	PF00448.22	gi|288559629|ref|YP_003423115.1|	-	0.00028	20.6	0.2	0.22	11.1	0.1	2.3	2	0	0	2	2	2	2	SRP54-type	protein,	GTPase	domain
MMR_HSR1	PF01926.23	gi|288559629|ref|YP_003423115.1|	-	0.00042	20.4	0.6	1.1	9.4	0.0	2.4	2	0	0	2	2	2	2	50S	ribosome-binding	GTPase
AAA_24	PF13479.6	gi|288559629|ref|YP_003423115.1|	-	0.00047	19.9	0.7	0.00085	19.1	0.2	1.9	1	1	1	2	2	2	1	AAA	domain
ABC_tran	PF00005.27	gi|288559629|ref|YP_003423115.1|	-	0.00047	20.7	1.1	0.00085	19.8	0.3	2.0	2	1	0	2	2	2	1	ABC	transporter
Zeta_toxin	PF06414.12	gi|288559629|ref|YP_003423115.1|	-	0.00089	18.6	0.0	0.0015	17.8	0.0	1.3	1	0	0	1	1	1	1	Zeta	toxin
DUF87	PF01935.17	gi|288559629|ref|YP_003423115.1|	-	0.0009	19.4	0.9	0.0017	18.5	0.1	1.8	2	0	0	2	2	2	1	Helicase	HerA,	central	domain
ArsA_ATPase	PF02374.15	gi|288559629|ref|YP_003423115.1|	-	0.0015	17.8	1.3	0.0026	17.0	0.0	1.9	2	1	0	2	2	2	1	Anion-transporting	ATPase
AAA_14	PF13173.6	gi|288559629|ref|YP_003423115.1|	-	0.0049	16.9	0.2	0.015	15.3	0.1	1.8	2	0	0	2	2	2	1	AAA	domain
NTPase_1	PF03266.15	gi|288559629|ref|YP_003423115.1|	-	0.0052	16.7	0.6	0.027	14.4	0.1	2.1	2	0	0	2	2	2	1	NTPase
Fer4_NifH	PF00142.18	gi|288559629|ref|YP_003423115.1|	-	0.0084	15.6	3.3	0.13	11.7	0.5	2.2	1	1	1	2	2	2	1	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
CLP1_P	PF16575.5	gi|288559629|ref|YP_003423115.1|	-	0.0086	15.9	0.4	0.12	12.1	0.1	2.2	2	0	0	2	2	2	1	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
KAP_NTPase	PF07693.14	gi|288559629|ref|YP_003423115.1|	-	0.0092	15.3	0.1	0.016	14.4	0.1	1.3	1	0	0	1	1	1	1	KAP	family	P-loop	domain
Viral_helicase1	PF01443.18	gi|288559629|ref|YP_003423115.1|	-	0.015	15.0	0.0	0.023	14.4	0.0	1.3	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
MipZ	PF09140.11	gi|288559629|ref|YP_003423115.1|	-	0.017	14.5	0.1	0.64	9.3	0.0	2.2	2	0	0	2	2	2	0	ATPase	MipZ
RNA_helicase	PF00910.22	gi|288559629|ref|YP_003423115.1|	-	0.019	15.4	0.0	0.069	13.5	0.0	1.9	2	0	0	2	2	2	0	RNA	helicase
Sigma54_activ_2	PF14532.6	gi|288559629|ref|YP_003423115.1|	-	0.025	14.7	0.2	2	8.6	0.1	2.2	2	0	0	2	2	2	0	Sigma-54	interaction	domain
MeaB	PF03308.16	gi|288559629|ref|YP_003423115.1|	-	0.028	13.4	0.2	0.94	8.4	0.0	2.1	2	0	0	2	2	2	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
AAA_18	PF13238.6	gi|288559629|ref|YP_003423115.1|	-	0.028	15.0	0.8	0.093	13.3	0.1	2.2	2	0	0	2	2	2	0	AAA	domain
ATP_bind_1	PF03029.17	gi|288559629|ref|YP_003423115.1|	-	0.033	14.0	1.0	0.042	13.6	0.2	1.9	2	1	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
Rad17	PF03215.15	gi|288559629|ref|YP_003423115.1|	-	0.034	14.1	0.0	0.08	12.9	0.0	1.6	2	0	0	2	2	2	0	Rad17	P-loop	domain
Methyltransf_25	PF13649.6	gi|288559629|ref|YP_003423115.1|	-	0.036	14.8	0.0	11	6.8	0.0	2.8	2	1	0	2	2	2	0	Methyltransferase	domain
RsgA_GTPase	PF03193.16	gi|288559629|ref|YP_003423115.1|	-	0.045	13.7	2.0	3	7.7	0.1	2.3	2	0	0	2	2	2	0	RsgA	GTPase
NACHT	PF05729.12	gi|288559629|ref|YP_003423115.1|	-	0.052	13.5	0.0	0.095	12.6	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
NB-ARC	PF00931.22	gi|288559629|ref|YP_003423115.1|	-	0.052	12.7	0.1	0.096	11.8	0.1	1.3	1	0	0	1	1	1	0	NB-ARC	domain
Methyltransf_12	PF08242.12	gi|288559629|ref|YP_003423115.1|	-	0.072	13.8	0.2	25	5.7	0.0	3.1	2	1	0	2	2	2	0	Methyltransferase	domain
AAA	PF00004.29	gi|288559629|ref|YP_003423115.1|	-	0.082	13.3	0.2	0.24	11.8	0.0	1.8	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
TauE	PF01925.19	gi|288559630|ref|YP_003423116.1|	-	1.4e-41	142.7	28.0	1.6e-41	142.5	28.0	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
UL41A	PF17591.2	gi|288559630|ref|YP_003423116.1|	-	4.1	7.6	7.8	1.1	9.3	1.8	3.0	3	0	0	3	3	3	0	Herpesvirus	UL41A
Fer4	PF00037.27	gi|288559631|ref|YP_003423117.1|	-	2.3e-10	39.9	9.0	7e-06	25.6	1.8	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|288559631|ref|YP_003423117.1|	-	2.7e-08	33.8	10.5	3.5e-08	33.5	10.5	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|288559631|ref|YP_003423117.1|	-	6.7e-08	33.0	11.4	1.6e-07	31.8	11.6	1.5	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|288559631|ref|YP_003423117.1|	-	6.8e-07	29.1	13.2	0.00071	19.5	3.4	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|288559631|ref|YP_003423117.1|	-	8.4e-06	25.8	12.4	1.3e-05	25.2	12.4	1.3	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|288559631|ref|YP_003423117.1|	-	9.1e-06	25.5	12.0	0.0039	17.2	1.7	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|288559631|ref|YP_003423117.1|	-	1.2e-05	26.1	7.6	0.012	16.5	0.4	2.1	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.7	gi|288559631|ref|YP_003423117.1|	-	0.00035	20.9	14.8	0.029	14.9	3.5	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|288559631|ref|YP_003423117.1|	-	0.0004	20.9	15.1	0.014	15.9	2.8	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|288559631|ref|YP_003423117.1|	-	0.00086	19.4	16.2	0.021	15.0	16.3	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|288559631|ref|YP_003423117.1|	-	0.003	18.4	16.4	0.13	13.2	3.3	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|288559631|ref|YP_003423117.1|	-	0.0064	16.9	15.5	0.07	13.6	3.0	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|288559631|ref|YP_003423117.1|	-	0.012	16.4	8.5	0.36	11.6	1.1	2.1	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.6	gi|288559631|ref|YP_003423117.1|	-	0.31	11.6	12.1	2.1	9.0	1.6	2.1	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_22	PF17179.4	gi|288559631|ref|YP_003423117.1|	-	1.1	10.1	14.5	1.2	10.0	3.9	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|288559631|ref|YP_003423117.1|	-	1.3	9.2	12.5	2	8.6	2.6	2.0	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
LapA_dom	PF06305.11	gi|288559633|ref|YP_003423119.1|	-	0.2	11.5	0.1	0.2	11.5	0.1	3.3	4	0	0	4	4	4	0	Lipopolysaccharide	assembly	protein	A	domain
DUF3099	PF11298.8	gi|288559633|ref|YP_003423119.1|	-	1.5	9.0	5.1	1.3	9.2	1.8	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3099)
YajC	PF02699.15	gi|288559633|ref|YP_003423119.1|	-	3.6	7.6	0.0	3.6	7.6	0.0	4.3	5	1	1	6	6	6	0	Preprotein	translocase	subunit
DUF4231	PF14015.6	gi|288559633|ref|YP_003423119.1|	-	3.7	8.1	8.2	0.63	10.5	0.4	2.7	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF4231)
Phage_holin_4_2	PF04020.13	gi|288559634|ref|YP_003423120.1|	-	1.2e-12	48.4	16.8	1.3e-12	48.3	15.6	1.6	2	0	0	2	2	2	1	Mycobacterial	4	TMS	phage	holin,	superfamily	IV
Phosphodiest	PF01663.22	gi|288559634|ref|YP_003423120.1|	-	2.3e-09	37.3	0.3	7.3e-09	35.7	0.3	1.7	1	1	0	1	1	1	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
DUF2206	PF09971.9	gi|288559634|ref|YP_003423120.1|	-	0.028	13.2	0.1	0.056	12.2	0.1	1.5	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2206)
DUF4013	PF13197.6	gi|288559635|ref|YP_003423121.1|	-	4.9e-34	117.6	25.2	4.9e-34	117.6	25.2	2.2	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF4013)
Fig1	PF12351.8	gi|288559635|ref|YP_003423121.1|	-	0.01	15.8	2.4	0.01	15.8	2.4	2.7	2	1	1	3	3	3	1	Ca2+	regulator	and	membrane	fusion	protein	Fig1
DUF308	PF03729.13	gi|288559636|ref|YP_003423122.1|	-	8.9e-07	29.2	24.3	8.9e-07	29.2	24.3	3.2	1	1	2	3	3	3	2	Short	repeat	of	unknown	function	(DUF308)
MFS_1	PF07690.16	gi|288559637|ref|YP_003423123.1|	-	5.1e-41	140.8	44.1	5.1e-41	140.8	44.1	2.3	2	1	0	2	2	2	1	Major	Facilitator	Superfamily
MFS_2	PF13347.6	gi|288559637|ref|YP_003423123.1|	-	1.4e-10	40.4	9.0	1.4e-10	40.4	9.0	3.5	3	1	0	3	3	3	1	MFS/sugar	transport	protein
MFS_3	PF05977.13	gi|288559637|ref|YP_003423123.1|	-	2.9e-09	35.9	26.2	9e-06	24.3	13.2	2.3	2	0	0	2	2	2	2	Transmembrane	secretion	effector
AdoHcyase	PF05221.17	gi|288559638|ref|YP_003423124.1|	-	5.1e-57	193.3	0.0	9.5e-29	100.5	0.0	2.0	1	1	1	2	2	2	2	S-adenosyl-L-homocysteine	hydrolase
AdoHcyase_NAD	PF00670.21	gi|288559638|ref|YP_003423124.1|	-	2.3e-53	180.6	2.3	2.3e-53	180.6	2.3	1.7	2	0	0	2	2	2	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.19	gi|288559638|ref|YP_003423124.1|	-	3.9e-09	36.1	0.1	1.1e-08	34.6	0.1	1.7	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
IlvN	PF07991.12	gi|288559638|ref|YP_003423124.1|	-	7.3e-08	32.1	0.1	1.6e-07	31.1	0.1	1.5	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
AlaDh_PNT_C	PF01262.21	gi|288559638|ref|YP_003423124.1|	-	0.0094	15.3	0.6	0.018	14.4	0.6	1.4	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
TrkA_N	PF02254.18	gi|288559638|ref|YP_003423124.1|	-	0.011	15.9	0.3	0.028	14.7	0.3	1.7	1	0	0	1	1	1	0	TrkA-N	domain
BKACE	PF05853.12	gi|288559638|ref|YP_003423124.1|	-	0.042	13.2	0.2	0.54	9.5	0.0	2.1	1	1	1	2	2	2	0	beta-keto	acid	cleavage	enzyme
DUF424	PF04242.13	gi|288559638|ref|YP_003423124.1|	-	0.12	12.7	0.0	1.3	9.3	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF424)
3HCDH_N	PF02737.18	gi|288559638|ref|YP_003423124.1|	-	0.14	12.1	0.5	0.26	11.2	0.5	1.5	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
DUF2119	PF09892.9	gi|288559639|ref|YP_003423125.1|	-	4.4e-73	244.7	0.1	5.1e-73	244.5	0.1	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2119)
DUF2059	PF09832.9	gi|288559639|ref|YP_003423125.1|	-	0.18	11.9	0.1	0.78	9.8	0.0	2.0	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2059)
XPG_I	PF00867.18	gi|288559640|ref|YP_003423126.1|	-	2.3e-27	95.2	0.0	8.9e-27	93.3	0.0	2.0	2	0	0	2	2	2	1	XPG	I-region
XPG_N	PF00752.17	gi|288559640|ref|YP_003423126.1|	-	1.9e-20	73.2	0.0	3.7e-20	72.3	0.0	1.5	1	0	0	1	1	1	1	XPG	N-terminal	domain
5_3_exonuc	PF01367.20	gi|288559640|ref|YP_003423126.1|	-	0.0067	17.0	0.7	0.023	15.3	0.0	2.2	2	0	0	2	2	2	1	5'-3'	exonuclease,	C-terminal	SAM	fold
HHH_5	PF14520.6	gi|288559640|ref|YP_003423126.1|	-	0.033	14.8	0.0	0.14	12.7	0.0	2.1	2	0	0	2	2	2	0	Helix-hairpin-helix	domain
TAL_effector	PF03377.13	gi|288559640|ref|YP_003423126.1|	-	0.17	12.2	0.0	23	5.4	0.0	2.6	2	0	0	2	2	2	0	TAL	effector	repeat
DUF98	PF01947.16	gi|288559641|ref|YP_003423127.1|	-	1e-30	106.7	0.1	1.7e-30	105.9	0.1	1.3	1	0	0	1	1	1	1	p-hydroxybenzoic	acid	synthase
UTRA	PF07702.13	gi|288559641|ref|YP_003423127.1|	-	1.2e-08	34.9	0.1	1.8e-08	34.3	0.1	1.3	1	0	0	1	1	1	1	UTRA	domain
Chor_lyase	PF04345.13	gi|288559641|ref|YP_003423127.1|	-	5.3e-07	29.4	0.0	6.1e-07	29.2	0.0	1.1	1	0	0	1	1	1	1	Chorismate	lyase
Aconitase	PF00330.20	gi|288559642|ref|YP_003423128.1|	-	9.4e-96	321.6	4.7	1.1e-93	314.8	4.7	2.3	1	1	0	1	1	1	1	Aconitase	family	(aconitate	hydratase)
DUF521	PF04412.13	gi|288559642|ref|YP_003423128.1|	-	0.009	14.8	0.0	0.014	14.2	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF521)
HMGL-like	PF00682.19	gi|288559643|ref|YP_003423129.1|	-	4.5e-78	262.5	0.5	6.5e-78	261.9	0.5	1.2	1	0	0	1	1	1	1	HMGL-like
CYTH	PF01928.21	gi|288559644|ref|YP_003423130.1|	-	4.9e-36	124.3	3.2	5.5e-36	124.2	3.2	1.0	1	0	0	1	1	1	1	CYTH	domain
DUF3883	PF13020.6	gi|288559644|ref|YP_003423130.1|	-	0.63	10.1	8.9	3.5	7.7	1.3	2.7	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF3883)
TBP	PF00352.21	gi|288559645|ref|YP_003423131.1|	-	3.4e-58	193.6	0.0	1.5e-29	101.8	0.0	2.0	2	0	0	2	2	2	2	Transcription	factor	TFIID	(or	TATA-binding	protein,	TBP)
DUF3378	PF11858.8	gi|288559645|ref|YP_003423131.1|	-	1.3e-06	28.5	0.0	0.015	15.4	0.0	2.3	2	1	0	2	2	2	2	Domain	of	unknown	function	(DUF3378)
NdhS	PF11623.8	gi|288559645|ref|YP_003423131.1|	-	0.14	11.9	0.0	6.7	6.4	0.0	2.3	2	0	0	2	2	2	0	NAD(P)H	dehydrogenase	subunit	S
HAD	PF12710.7	gi|288559646|ref|YP_003423132.1|	-	1.8e-18	67.7	0.0	1.8e-18	67.7	0.0	3.3	3	1	0	3	3	3	1	haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.26	gi|288559646|ref|YP_003423132.1|	-	1.5e-17	64.6	0.8	1.5e-17	64.6	0.8	3.3	3	0	0	3	3	3	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.12	gi|288559646|ref|YP_003423132.1|	-	1.6e-12	47.7	0.2	1.6e-12	47.7	0.2	5.2	2	1	4	6	6	6	1	haloacid	dehalogenase-like	hydrolase
Put_Phosphatase	PF06888.12	gi|288559646|ref|YP_003423132.1|	-	2.7e-07	30.3	7.5	1.3e-06	28.0	1.9	3.4	2	1	0	2	2	2	1	Putative	Phosphatase
HAD_2	PF13419.6	gi|288559646|ref|YP_003423132.1|	-	0.00014	22.0	4.5	0.00014	22.0	4.5	5.5	2	2	0	3	3	3	1	Haloacid	dehalogenase-like	hydrolase
zf-C2H2_3rep	PF18868.1	gi|288559647|ref|YP_003423133.1|	-	0.056	14.1	0.1	0.086	13.5	0.1	1.2	1	0	0	1	1	1	0	Zinc	finger	C2H2-type,	3	repeats
Topoisom_bac	PF01131.20	gi|288559648|ref|YP_003423134.1|	-	3.2e-117	392.0	0.2	4.3e-117	391.6	0.2	1.2	1	0	0	1	1	1	1	DNA	topoisomerase
zf-C4_Topoisom	PF01396.19	gi|288559648|ref|YP_003423134.1|	-	4.9e-26	90.2	24.4	4.4e-15	55.2	5.7	3.6	3	0	0	3	3	3	2	Topoisomerase	DNA	binding	C4	zinc	finger
Toprim	PF01751.22	gi|288559648|ref|YP_003423134.1|	-	8.9e-18	64.4	1.4	2.7e-17	62.9	0.1	2.5	3	0	0	3	3	3	1	Toprim	domain
Auto_anti-p27	PF06677.12	gi|288559648|ref|YP_003423134.1|	-	0.00016	21.7	3.3	0.00026	21.1	1.1	2.3	2	0	0	2	2	2	1	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zf-C2HC5	PF06221.13	gi|288559648|ref|YP_003423134.1|	-	0.027	14.5	0.8	1.2	9.1	0.2	2.6	2	0	0	2	2	2	0	Putative	zinc	finger	motif,	C2HC5-type
Paz_1	PF18349.1	gi|288559648|ref|YP_003423134.1|	-	0.062	13.3	0.3	0.19	11.7	0.3	1.8	1	0	0	1	1	1	0	PAZ	domain
zf-ribbon_3	PF13248.6	gi|288559648|ref|YP_003423134.1|	-	0.087	12.3	4.4	4	7.0	0.2	3.5	3	0	0	3	3	3	0	zinc-ribbon	domain
YhfH	PF14149.6	gi|288559648|ref|YP_003423134.1|	-	0.11	12.5	2.9	8.5	6.5	0.2	2.9	2	0	0	2	2	2	0	YhfH-like	protein
DZR	PF12773.7	gi|288559648|ref|YP_003423134.1|	-	0.15	12.1	3.8	0.96	9.5	3.8	2.3	1	1	0	1	1	1	0	Double	zinc	ribbon
Zn-ribbon_8	PF09723.10	gi|288559648|ref|YP_003423134.1|	-	0.21	11.8	6.2	0.74	10.0	1.3	2.8	2	0	0	2	2	2	0	Zinc	ribbon	domain
Nudix_N_2	PF14803.6	gi|288559648|ref|YP_003423134.1|	-	1.5	8.8	4.1	10	6.1	0.1	3.5	3	0	0	3	3	3	0	Nudix	N-terminal
Nop10p	PF04135.12	gi|288559648|ref|YP_003423134.1|	-	3.5	7.7	5.3	34	4.6	0.1	3.6	3	0	0	3	3	3	0	Nucleolar	RNA-binding	protein,	Nop10p	family
Rubredoxin_2	PF18073.1	gi|288559648|ref|YP_003423134.1|	-	5.1	6.9	5.6	0.75	9.6	0.4	2.3	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
DUF1272	PF06906.11	gi|288559648|ref|YP_003423134.1|	-	7	6.8	7.0	23	5.2	0.4	3.3	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1272)
STT3	PF02516.14	gi|288559649|ref|YP_003423135.1|	-	7.6e-86	289.0	33.9	1e-85	288.5	33.9	1.2	1	0	0	1	1	1	1	Oligosaccharyl	transferase	STT3	subunit
SAM_4	PF18017.1	gi|288559649|ref|YP_003423135.1|	-	0.067	13.2	0.2	0.21	11.6	0.2	1.9	1	0	0	1	1	1	0	SAM	domain	(Sterile	alpha	motif)
OAD_gamma	PF04277.13	gi|288559649|ref|YP_003423135.1|	-	0.32	11.6	0.0	0.32	11.6	0.0	4.2	5	0	0	5	5	5	0	Oxaloacetate	decarboxylase,	gamma	chain
MMR_HSR1_Xtn	PF16897.5	gi|288559650|ref|YP_003423136.1|	-	2.7e-38	130.2	0.6	7.4e-38	128.8	0.6	1.8	1	0	0	1	1	1	1	C-terminal	region	of	MMR_HSR1	domain
MMR_HSR1	PF01926.23	gi|288559650|ref|YP_003423136.1|	-	6.8e-22	77.7	0.4	1.5e-21	76.6	0.1	1.7	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
TGS	PF02824.21	gi|288559650|ref|YP_003423136.1|	-	1.3e-20	73.2	0.1	2.4e-20	72.3	0.1	1.5	1	0	0	1	1	1	1	TGS	domain
FeoB_N	PF02421.18	gi|288559650|ref|YP_003423136.1|	-	1.5e-15	57.1	1.4	1.4e-13	50.7	0.2	2.3	2	0	0	2	2	2	2	Ferrous	iron	transport	protein	B
RsgA_GTPase	PF03193.16	gi|288559650|ref|YP_003423136.1|	-	3.9e-07	30.1	2.3	0.021	14.7	0.1	2.7	3	0	0	3	3	3	2	RsgA	GTPase
Arf	PF00025.21	gi|288559650|ref|YP_003423136.1|	-	4e-05	23.2	0.6	0.06	12.8	0.1	2.7	2	1	0	2	2	2	2	ADP-ribosylation	factor	family
Dynamin_N	PF00350.23	gi|288559650|ref|YP_003423136.1|	-	0.00065	19.8	2.2	0.49	10.4	0.0	2.8	2	1	1	3	3	3	2	Dynamin	family
Ras	PF00071.22	gi|288559650|ref|YP_003423136.1|	-	0.0027	17.3	0.1	2.3	7.8	0.0	2.6	2	1	0	2	2	2	2	Ras	family
Roc	PF08477.13	gi|288559650|ref|YP_003423136.1|	-	0.0055	16.9	0.0	0.21	11.8	0.0	2.6	2	1	0	2	2	2	1	Ras	of	Complex,	Roc,	domain	of	DAPkinase
GTP_EFTU	PF00009.27	gi|288559650|ref|YP_003423136.1|	-	0.0091	15.6	2.4	0.54	9.8	0.1	3.9	2	2	1	3	3	3	1	Elongation	factor	Tu	GTP	binding	domain
YchF-GTPase_C	PF06071.13	gi|288559650|ref|YP_003423136.1|	-	0.017	15.3	0.2	0.28	11.4	0.0	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF933)
cobW	PF02492.19	gi|288559650|ref|YP_003423136.1|	-	0.021	14.4	3.1	0.86	9.2	0.0	3.1	2	1	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_16	PF13191.6	gi|288559650|ref|YP_003423136.1|	-	0.072	13.5	0.0	0.15	12.4	0.0	1.5	1	0	0	1	1	1	0	AAA	ATPase	domain
DUF2443	PF10398.9	gi|288559650|ref|YP_003423136.1|	-	3.6	7.7	8.0	0.95	9.6	1.5	2.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2443)
AAA_18	PF13238.6	gi|288559651|ref|YP_003423137.1|	-	8.2e-27	94.3	0.1	1.1e-26	93.9	0.1	1.2	1	0	0	1	1	1	1	AAA	domain
KTI12	PF08433.10	gi|288559651|ref|YP_003423137.1|	-	0.00025	20.6	0.0	0.00049	19.6	0.0	1.4	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
AAA_28	PF13521.6	gi|288559651|ref|YP_003423137.1|	-	0.001	19.4	0.3	0.0023	18.2	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
DUF1611	PF07755.11	gi|288559651|ref|YP_003423137.1|	-	0.001	18.4	0.0	0.0023	17.3	0.0	1.8	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF1611_C)	P-loop	domain
Thymidylate_kin	PF02223.17	gi|288559651|ref|YP_003423137.1|	-	0.0011	18.7	0.2	0.23	11.1	0.1	2.2	2	0	0	2	2	2	1	Thymidylate	kinase
APS_kinase	PF01583.20	gi|288559651|ref|YP_003423137.1|	-	0.0025	17.7	0.0	0.0036	17.2	0.0	1.3	1	0	0	1	1	1	1	Adenylylsulphate	kinase
AAA_33	PF13671.6	gi|288559651|ref|YP_003423137.1|	-	0.01	16.0	0.0	0.068	13.3	0.0	2.1	1	1	0	1	1	1	0	AAA	domain
MobB	PF03205.14	gi|288559651|ref|YP_003423137.1|	-	0.014	15.3	0.1	0.092	12.7	0.0	2.2	2	1	1	3	3	3	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
IstB_IS21	PF01695.17	gi|288559651|ref|YP_003423137.1|	-	0.015	15.0	0.0	0.026	14.3	0.0	1.4	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA_17	PF13207.6	gi|288559651|ref|YP_003423137.1|	-	0.015	15.7	0.3	0.17	12.3	0.3	2.4	1	1	0	1	1	1	0	AAA	domain
NTPase_1	PF03266.15	gi|288559651|ref|YP_003423137.1|	-	0.015	15.2	0.1	0.041	13.8	0.1	1.7	1	0	0	1	1	1	0	NTPase
SKI	PF01202.22	gi|288559651|ref|YP_003423137.1|	-	0.019	15.1	0.3	0.13	12.4	0.2	2.0	2	0	0	2	2	2	0	Shikimate	kinase
AAA	PF00004.29	gi|288559651|ref|YP_003423137.1|	-	0.021	15.2	0.0	0.043	14.3	0.0	1.8	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.6	gi|288559651|ref|YP_003423137.1|	-	0.023	15.1	0.0	0.14	12.6	0.0	2.2	1	1	0	1	1	1	0	AAA	ATPase	domain
dNK	PF01712.19	gi|288559651|ref|YP_003423137.1|	-	0.024	14.5	0.9	0.86	9.4	0.1	2.2	1	1	1	2	2	2	0	Deoxynucleoside	kinase
6PF2K	PF01591.18	gi|288559651|ref|YP_003423137.1|	-	0.025	13.9	0.0	0.049	12.9	0.0	1.5	1	0	0	1	1	1	0	6-phosphofructo-2-kinase
CbiA	PF01656.23	gi|288559651|ref|YP_003423137.1|	-	0.042	13.9	0.1	0.059	13.4	0.1	1.3	1	1	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_24	PF13479.6	gi|288559651|ref|YP_003423137.1|	-	0.046	13.5	0.0	0.07	12.8	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
CPT	PF07931.12	gi|288559651|ref|YP_003423137.1|	-	0.049	13.5	0.1	1	9.2	0.0	2.1	2	0	0	2	2	2	0	Chloramphenicol	phosphotransferase-like	protein
Zeta_toxin	PF06414.12	gi|288559651|ref|YP_003423137.1|	-	0.049	12.9	0.0	0.082	12.2	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
NB-ARC	PF00931.22	gi|288559651|ref|YP_003423137.1|	-	0.072	12.3	0.2	0.15	11.2	0.1	1.8	1	1	0	1	1	1	0	NB-ARC	domain
PhoH	PF02562.16	gi|288559651|ref|YP_003423137.1|	-	0.081	12.4	0.0	0.11	11.9	0.0	1.4	1	0	0	1	1	1	0	PhoH-like	protein
ATPase	PF06745.13	gi|288559651|ref|YP_003423137.1|	-	0.089	12.1	0.0	0.16	11.3	0.0	1.4	1	0	0	1	1	1	0	KaiC
AAA_22	PF13401.6	gi|288559651|ref|YP_003423137.1|	-	0.096	13.0	0.0	0.27	11.5	0.0	1.8	1	1	1	2	2	2	0	AAA	domain
AAA_7	PF12775.7	gi|288559651|ref|YP_003423137.1|	-	0.11	12.1	0.0	0.2	11.2	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
T2SSE	PF00437.20	gi|288559651|ref|YP_003423137.1|	-	0.11	11.6	0.0	0.19	10.8	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_14	PF13173.6	gi|288559651|ref|YP_003423137.1|	-	0.11	12.6	0.4	0.2	11.7	0.1	1.6	1	1	1	2	2	2	0	AAA	domain
DUF2075	PF09848.9	gi|288559651|ref|YP_003423137.1|	-	0.12	11.6	0.2	0.14	11.4	0.2	1.4	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_11	PF13086.6	gi|288559651|ref|YP_003423137.1|	-	0.21	11.3	0.5	1.4	8.7	0.5	2.3	1	1	0	1	1	1	0	AAA	domain
Rpr2	PF04032.16	gi|288559652|ref|YP_003423138.1|	-	6.9e-16	58.3	1.4	1.7e-15	57.1	1.4	1.7	1	1	0	1	1	1	1	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
zinc_ribbon_12	PF11331.8	gi|288559652|ref|YP_003423138.1|	-	0.0099	15.7	0.8	0.017	14.9	0.8	1.4	1	0	0	1	1	1	1	Probable	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|288559652|ref|YP_003423138.1|	-	0.013	15.0	1.1	0.024	14.2	0.0	1.9	2	0	0	2	2	2	0	TFIIB	zinc-binding
Zn_ribbon_recom	PF13408.6	gi|288559652|ref|YP_003423138.1|	-	0.034	14.7	0.6	0.034	14.7	0.6	2.2	2	1	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
DZR	PF12773.7	gi|288559652|ref|YP_003423138.1|	-	0.11	12.5	2.6	1.2	9.2	2.6	2.1	1	1	0	1	1	1	0	Double	zinc	ribbon
CRS1_YhbY	PF01985.21	gi|288559653|ref|YP_003423139.1|	-	1e-13	51.2	0.3	1.1e-13	51.1	0.3	1.0	1	0	0	1	1	1	1	CRS1	/	YhbY	(CRM)	domain
Ribosomal_S19e	PF01090.19	gi|288559654|ref|YP_003423140.1|	-	7.2e-55	184.4	0.0	8.1e-55	184.3	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S19e
RuvB_C	PF05491.13	gi|288559654|ref|YP_003423140.1|	-	0.0044	16.9	0.0	0.32	10.9	0.0	2.3	2	0	0	2	2	2	2	RuvB	C-terminal	winged	helix	domain
dsDNA_bind	PF01984.20	gi|288559655|ref|YP_003423141.1|	-	1.5e-25	89.6	22.7	2.2e-25	89.1	22.7	1.3	1	0	0	1	1	1	1	Double-stranded	DNA-binding	domain
PP_kinase_N	PF13089.6	gi|288559655|ref|YP_003423141.1|	-	0.024	14.9	4.3	0.024	14.9	4.3	1.5	2	0	0	2	2	2	0	Polyphosphate	kinase	N-terminal	domain
Gemini_coat	PF00844.18	gi|288559655|ref|YP_003423141.1|	-	0.08	12.4	0.1	0.091	12.2	0.1	1.1	1	0	0	1	1	1	0	Geminivirus	coat	protein/nuclear	export	factor	BR1	family
DUF945	PF06097.11	gi|288559655|ref|YP_003423141.1|	-	1.5	7.9	11.2	1.8	7.6	11.2	1.2	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF945)
TFIIA	PF03153.13	gi|288559655|ref|YP_003423141.1|	-	1.6	8.6	14.5	1.7	8.5	14.5	1.0	1	0	0	1	1	1	0	Transcription	factor	IIA,	alpha/beta	subunit
QueC	PF06508.13	gi|288559656|ref|YP_003423142.1|	-	0.0055	16.2	0.0	0.0074	15.8	0.0	1.2	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
Diphthami_syn_2	PF01902.17	gi|288559656|ref|YP_003423142.1|	-	0.023	14.2	0.0	0.03	13.8	0.0	1.3	1	0	0	1	1	1	0	Diphthamide	synthase
Asn_synthase	PF00733.21	gi|288559656|ref|YP_003423142.1|	-	0.076	12.7	0.0	0.12	12.0	0.0	1.3	1	1	0	1	1	1	0	Asparagine	synthase
Ribosomal_L39	PF00832.20	gi|288559657|ref|YP_003423143.1|	-	9.1e-18	63.6	13.1	1.1e-17	63.3	13.1	1.1	1	0	0	1	1	1	1	Ribosomal	L39	protein
GYR	PF02756.14	gi|288559657|ref|YP_003423143.1|	-	0.08	12.7	1.9	0.26	11.0	1.9	1.9	1	0	0	1	1	1	0	GYR	motif
Ribosomal_L31e	PF01198.19	gi|288559658|ref|YP_003423144.1|	-	2.1e-18	66.3	1.3	2.3e-18	66.2	1.3	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L31e
A1_Propeptide	PF07966.12	gi|288559658|ref|YP_003423144.1|	-	0.064	13.1	2.6	0.16	11.9	0.5	2.4	3	0	0	3	3	3	0	A1	Propeptide
eIF-6	PF01912.18	gi|288559659|ref|YP_003423145.1|	-	5.1e-65	218.6	3.2	6.6e-65	218.2	3.2	1.2	1	0	0	1	1	1	1	eIF-6	family
Ribosomal_L18A	PF01775.17	gi|288559660|ref|YP_003423146.1|	-	1.2e-12	48.0	0.7	1.5e-12	47.7	0.7	1.2	1	0	0	1	1	1	1	Ribosomal	proteins	50S-L18Ae/60S-L20/60S-L18A
Prefoldin	PF02996.17	gi|288559661|ref|YP_003423147.1|	-	1.5e-24	86.2	5.0	1.5e-24	86.2	5.0	1.4	2	0	0	2	2	2	1	Prefoldin	subunit
CdvA	PF18822.1	gi|288559661|ref|YP_003423147.1|	-	0.0021	17.9	5.1	0.32	10.8	0.4	2.4	2	0	0	2	2	2	2	CdvA-like	coiled-coil	domain
Sec6	PF06046.13	gi|288559661|ref|YP_003423147.1|	-	0.0055	15.1	1.0	0.0064	14.9	0.1	1.5	2	0	0	2	2	2	1	Exocyst	complex	component	Sec6
DUF16	PF01519.16	gi|288559661|ref|YP_003423147.1|	-	0.024	15.1	0.7	0.024	15.1	0.7	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF16
NPV_P10	PF05531.12	gi|288559661|ref|YP_003423147.1|	-	0.025	15.1	11.5	0.58	10.7	2.8	2.3	2	1	0	2	2	2	0	Nucleopolyhedrovirus	P10	protein
GAGBD	PF16828.5	gi|288559661|ref|YP_003423147.1|	-	0.034	14.3	1.3	0.48	10.5	0.2	2.1	2	0	0	2	2	2	0	GAG-binding	domain	on	surface	antigen
DUF1664	PF07889.12	gi|288559661|ref|YP_003423147.1|	-	0.041	13.9	6.2	0.1	12.6	0.5	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
Prefoldin_2	PF01920.20	gi|288559661|ref|YP_003423147.1|	-	0.043	13.8	12.7	0.58	10.1	4.1	2.3	2	0	0	2	2	2	0	Prefoldin	subunit
BLOC1_2	PF10046.9	gi|288559661|ref|YP_003423147.1|	-	0.063	13.6	11.8	0.41	11.0	1.0	2.2	2	0	0	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
ApoO	PF09769.9	gi|288559661|ref|YP_003423147.1|	-	0.11	12.5	0.4	0.23	11.4	0.1	1.7	2	0	0	2	2	2	0	Apolipoprotein	O
DUF948	PF06103.11	gi|288559661|ref|YP_003423147.1|	-	0.14	12.4	4.0	0.15	12.3	0.7	2.5	2	1	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
Tup_N	PF08581.10	gi|288559661|ref|YP_003423147.1|	-	0.23	11.8	8.9	0.56	10.6	1.1	2.2	2	0	0	2	2	2	0	Tup	N-terminal
Phasin_2	PF09361.10	gi|288559661|ref|YP_003423147.1|	-	0.35	11.2	12.8	0.11	12.8	4.8	2.5	2	1	0	2	2	2	0	Phasin	protein
HBM	PF16591.5	gi|288559661|ref|YP_003423147.1|	-	0.38	10.1	9.0	0.13	11.6	1.1	2.1	2	0	0	2	2	2	0	Helical	bimodular	sensor	domain
Cob_adeno_trans	PF01923.18	gi|288559661|ref|YP_003423147.1|	-	0.45	10.6	4.0	0.77	9.9	1.4	1.9	1	1	1	2	2	2	0	Cobalamin	adenosyltransferase
DUF2205	PF10224.9	gi|288559661|ref|YP_003423147.1|	-	0.57	10.2	8.0	0.67	10.0	0.8	3.0	2	2	0	2	2	2	0	Short	coiled-coil	protein
DivIVA	PF05103.13	gi|288559661|ref|YP_003423147.1|	-	0.67	10.0	10.7	3.6	7.7	2.4	2.1	2	0	0	2	2	2	0	DivIVA	protein
CRR7	PF12095.8	gi|288559661|ref|YP_003423147.1|	-	1.5	9.3	6.3	1.2	9.6	0.6	2.3	2	0	0	2	2	2	0	Protein	CHLORORESPIRATORY	REDUCTION	7
DUF4140	PF13600.6	gi|288559661|ref|YP_003423147.1|	-	2.1	8.8	7.2	3.4	8.2	0.6	2.3	2	0	0	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
CLZ	PF16526.5	gi|288559661|ref|YP_003423147.1|	-	4.2	7.8	9.2	1.3	9.5	2.2	2.6	2	1	1	3	3	3	0	C-terminal	leucine	zipper	domain	of	cyclic	nucleotide-gated	channels
SRP54	PF00448.22	gi|288559662|ref|YP_003423148.1|	-	6.9e-76	254.3	1.0	1.4e-75	253.3	1.0	1.5	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SRP54_N	PF02881.19	gi|288559662|ref|YP_003423148.1|	-	2.4e-10	40.5	0.5	2.4e-10	40.5	0.5	4.6	4	0	0	4	4	4	1	SRP54-type	protein,	helical	bundle	domain
AAA_30	PF13604.6	gi|288559662|ref|YP_003423148.1|	-	2.8e-09	37.0	0.7	5.2e-09	36.1	0.7	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.6	gi|288559662|ref|YP_003423148.1|	-	0.00016	22.1	0.0	0.00016	22.1	0.0	2.9	3	0	0	3	3	3	1	AAA	ATPase	domain
cobW	PF02492.19	gi|288559662|ref|YP_003423148.1|	-	0.00024	20.7	0.4	0.00075	19.1	0.4	1.8	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
MMR_HSR1	PF01926.23	gi|288559662|ref|YP_003423148.1|	-	0.0018	18.3	1.3	0.0018	18.3	1.3	3.8	3	2	1	4	4	4	1	50S	ribosome-binding	GTPase
MeaB	PF03308.16	gi|288559662|ref|YP_003423148.1|	-	0.0019	17.2	0.5	0.013	14.5	0.5	2.2	1	1	0	1	1	1	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
AAA_22	PF13401.6	gi|288559662|ref|YP_003423148.1|	-	0.0044	17.3	0.1	0.019	15.2	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
Helicase_RecD	PF05127.14	gi|288559662|ref|YP_003423148.1|	-	0.028	14.3	0.1	0.028	14.3	0.1	2.3	2	0	0	2	2	2	0	Helicase
AAA_33	PF13671.6	gi|288559662|ref|YP_003423148.1|	-	0.029	14.5	0.0	0.096	12.8	0.0	2.0	1	0	0	1	1	1	0	AAA	domain
MobB	PF03205.14	gi|288559662|ref|YP_003423148.1|	-	0.048	13.6	4.4	1.4	8.8	0.4	2.7	1	1	1	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_7	PF12775.7	gi|288559662|ref|YP_003423148.1|	-	0.058	12.9	0.1	0.1	12.1	0.1	1.3	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
CLP1_P	PF16575.5	gi|288559662|ref|YP_003423148.1|	-	0.1	12.4	0.1	8.1	6.2	0.0	2.6	2	0	0	2	2	2	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
AAA	PF00004.29	gi|288559662|ref|YP_003423148.1|	-	0.2	12.1	3.2	0.5	10.8	1.1	2.8	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_19	PF13245.6	gi|288559662|ref|YP_003423148.1|	-	3.5	7.9	6.7	0.26	11.6	1.1	2.1	2	1	0	2	2	1	0	AAA	domain
Na_H_antiporter	PF03553.14	gi|288559663|ref|YP_003423149.1|	-	1.3e-64	218.4	39.9	4.1e-61	206.8	26.8	3.0	1	1	1	2	2	2	2	Na+/H+	antiporter	family
DUF2156	PF09924.9	gi|288559663|ref|YP_003423149.1|	-	0.093	11.7	0.0	0.14	11.1	0.0	1.2	1	0	0	1	1	1	0	Uncharacterised	conserved	protein	(DUF2156)
DUF2207	PF09972.9	gi|288559663|ref|YP_003423149.1|	-	0.33	9.6	0.0	0.33	9.6	0.0	3.6	2	1	0	3	3	3	0	Predicted	membrane	protein	(DUF2207)
SNF	PF00209.18	gi|288559664|ref|YP_003423150.1|	-	1.2e-84	285.0	45.8	1.2e-55	189.2	25.4	2.0	1	1	1	2	2	2	2	Sodium:neurotransmitter	symporter	family
SNF	PF00209.18	gi|288559665|ref|YP_003423151.1|	-	3.1e-64	217.5	52.5	8.8e-42	143.5	28.2	2.1	1	1	1	2	2	2	2	Sodium:neurotransmitter	symporter	family
TPP_enzyme_N	PF02776.18	gi|288559667|ref|YP_003423153.1|	-	4.7e-42	143.5	0.0	7.8e-42	142.8	0.0	1.4	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.21	gi|288559667|ref|YP_003423153.1|	-	1.2e-35	122.5	0.0	8.9e-34	116.5	0.0	2.2	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.22	gi|288559667|ref|YP_003423153.1|	-	4.5e-27	94.5	0.0	8e-27	93.6	0.0	1.4	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
UIM	PF02809.20	gi|288559667|ref|YP_003423153.1|	-	0.016	15.1	0.3	0.038	13.9	0.3	1.7	1	0	0	1	1	1	0	Ubiquitin	interaction	motif
YihI	PF04220.12	gi|288559667|ref|YP_003423153.1|	-	0.076	12.7	0.1	0.15	11.7	0.1	1.4	1	0	0	1	1	1	0	Der	GTPase	activator	(YihI)
PLDc	PF00614.22	gi|288559667|ref|YP_003423153.1|	-	0.11	12.7	1.2	0.24	11.7	0.0	2.3	2	0	0	2	2	2	0	Phospholipase	D	Active	site	motif
V_ATPase_I	PF01496.19	gi|288559669|ref|YP_003423155.1|	-	0.068	11.1	12.6	0.78	7.6	6.8	2.1	2	0	0	2	2	2	0	V-type	ATPase	116kDa	subunit	family
Serinc	PF03348.15	gi|288559669|ref|YP_003423155.1|	-	0.12	11.2	3.6	4.9	6.0	1.4	2.2	2	0	0	2	2	2	0	Serine	incorporator	(Serinc)
SID-1_RNA_chan	PF13965.6	gi|288559669|ref|YP_003423155.1|	-	1.4	7.2	11.6	0.72	8.2	0.5	2.0	2	0	0	2	2	2	0	dsRNA-gated	channel	SID-1
DUF4834	PF16118.5	gi|288559669|ref|YP_003423155.1|	-	1.9	9.5	22.0	0.66	11.0	4.6	2.8	2	2	0	2	2	2	0	Domain	of	unknown	function	(DUF4834)
DUF2052	PF09747.9	gi|288559669|ref|YP_003423155.1|	-	2.3	8.3	27.4	4.3	7.4	2.4	2.1	2	0	0	2	2	2	0	Coiled-coil	domain	containing	protein	(DUF2052)
Connexin	PF00029.19	gi|288559669|ref|YP_003423155.1|	-	3.1	7.5	18.5	3.6	7.3	0.1	2.5	2	1	0	2	2	2	0	Connexin
Spore_YtfJ	PF09579.10	gi|288559670|ref|YP_003423156.1|	-	4.7e-13	49.1	1.0	7.6e-13	48.4	1.0	1.3	1	0	0	1	1	1	1	Sporulation	protein	YtfJ	(Spore_YtfJ)
Thioredoxin_4	PF13462.6	gi|288559670|ref|YP_003423156.1|	-	0.071	13.3	0.1	0.1	12.7	0.1	1.3	1	0	0	1	1	1	0	Thioredoxin
Aminotran_5	PF00266.19	gi|288559671|ref|YP_003423157.1|	-	5.3e-48	163.8	0.2	6.5e-48	163.6	0.2	1.0	1	0	0	1	1	1	1	Aminotransferase	class-V
DegT_DnrJ_EryC1	PF01041.17	gi|288559671|ref|YP_003423157.1|	-	1.4e-06	27.9	0.4	2.9e-06	26.8	0.4	1.4	1	1	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Cys_Met_Meta_PP	PF01053.20	gi|288559671|ref|YP_003423157.1|	-	0.0091	14.6	0.4	0.015	13.8	0.3	1.4	1	1	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
DUF4092	PF13322.6	gi|288559671|ref|YP_003423157.1|	-	0.084	12.7	0.1	0.46	10.3	0.0	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4092)
Adeno_PVIII	PF01310.18	gi|288559671|ref|YP_003423157.1|	-	0.17	11.4	0.0	0.26	10.8	0.0	1.2	1	0	0	1	1	1	0	Adenovirus	hexon	associated	protein,	protein	VIII
Metallophos	PF00149.28	gi|288559672|ref|YP_003423158.1|	-	5e-11	43.5	3.9	9.6e-11	42.6	3.9	1.5	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|288559672|ref|YP_003423158.1|	-	0.00079	19.7	2.9	0.0014	18.8	2.9	1.4	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
PgaD	PF13994.6	gi|288559672|ref|YP_003423158.1|	-	0.98	9.5	5.4	0.74	9.9	2.9	1.9	1	1	1	2	2	2	0	PgaD-like	protein
Aldo_ket_red	PF00248.21	gi|288559673|ref|YP_003423159.1|	-	7.6e-44	150.1	0.2	6.2e-42	143.8	0.2	2.1	1	1	0	1	1	1	1	Aldo/keto	reductase	family
Fer4_17	PF13534.6	gi|288559673|ref|YP_003423159.1|	-	1.3e-10	41.7	6.8	2.6e-10	40.7	6.8	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|288559673|ref|YP_003423159.1|	-	2.3e-08	34.0	2.9	5.7e-08	32.8	2.9	1.7	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|288559673|ref|YP_003423159.1|	-	9.8e-05	22.7	5.4	0.00022	21.6	5.4	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|288559673|ref|YP_003423159.1|	-	0.00058	19.9	5.6	0.0087	16.2	0.1	2.4	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|288559673|ref|YP_003423159.1|	-	0.0017	19.1	5.0	0.42	11.5	0.9	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|288559673|ref|YP_003423159.1|	-	0.0021	18.2	2.9	0.46	10.7	0.2	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|288559673|ref|YP_003423159.1|	-	0.0022	17.7	9.5	0.018	14.9	0.9	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|288559673|ref|YP_003423159.1|	-	0.019	15.4	1.8	0.019	15.4	1.8	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|288559673|ref|YP_003423159.1|	-	0.062	13.4	1.1	0.062	13.4	1.1	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_20	PF14691.6	gi|288559673|ref|YP_003423159.1|	-	0.082	12.7	0.1	0.082	12.7	0.1	2.1	2	0	0	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_16	PF13484.6	gi|288559673|ref|YP_003423159.1|	-	0.15	13.0	5.4	1.7	9.7	0.7	2.4	2	0	0	2	2	2	0	4Fe-4S	double	cluster	binding	domain
Fer4_7	PF12838.7	gi|288559673|ref|YP_003423159.1|	-	0.31	11.7	12.5	1.4	9.6	12.5	2.0	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|288559673|ref|YP_003423159.1|	-	0.77	9.9	8.4	5.2	7.3	1.3	2.4	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|288559673|ref|YP_003423159.1|	-	1.7	8.9	15.8	0.7	10.1	2.8	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Big_3_5	PF16640.5	gi|288559674|ref|YP_003423160.1|	-	2.6e-32	110.8	32.0	3.5e-08	33.5	6.1	9.1	9	0	0	9	9	9	8	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|288559674|ref|YP_003423160.1|	-	8.3e-25	86.6	18.5	2e-06	27.7	1.6	8.5	7	0	0	7	7	7	6	Bacterial	Ig-like	domain	(group	1)
CarboxypepD_reg	PF13620.6	gi|288559674|ref|YP_003423160.1|	-	1e-20	73.8	16.2	0.011	16.0	0.0	7.8	7	1	1	8	8	8	6	Carboxypeptidase	regulatory-like	domain
Invasin_D3	PF09134.10	gi|288559674|ref|YP_003423160.1|	-	1.2e-16	60.7	37.0	0.00014	22.1	5.3	7.3	6	1	1	7	7	7	4	Invasin,	domain	3
MG4	PF17789.1	gi|288559674|ref|YP_003423160.1|	-	4e-15	55.7	15.7	0.0068	16.5	0.0	8.2	6	1	1	7	7	7	4	Macroglobulin	domain	MG4
YtkA	PF13115.6	gi|288559674|ref|YP_003423160.1|	-	2.4e-05	24.8	3.5	2.1	9.0	0.0	5.9	6	0	0	6	6	6	1	YtkA-like
Big_11	PF18200.1	gi|288559674|ref|YP_003423160.1|	-	0.0013	18.6	0.2	0.0013	18.6	0.2	5.4	5	0	0	5	5	5	1	Bacterial	Ig-like	domain
Beta_helix	PF13229.6	gi|288559674|ref|YP_003423160.1|	-	0.0013	18.6	41.8	0.0013	18.6	41.8	8.7	1	1	5	7	7	7	3	Right	handed	beta	helix	region
Chlam_PMP	PF02415.17	gi|288559674|ref|YP_003423160.1|	-	0.0077	16.6	88.8	0.042	14.3	0.6	14.6	13	1	0	13	13	13	6	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
DUF4198	PF10670.9	gi|288559674|ref|YP_003423160.1|	-	0.055	13.8	6.7	6.9	7.0	0.0	5.3	6	0	0	6	6	6	0	Domain	of	unknown	function	(DUF4198)
Chlam_PMP	PF02415.17	gi|288559675|ref|YP_003423161.1|	-	0.036	14.5	44.9	0.12	12.9	0.9	9.3	9	0	0	9	9	9	0	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
Big_3_5	PF16640.5	gi|288559676|ref|YP_003423162.1|	-	3.2e-43	145.8	63.1	2.5e-10	40.4	6.7	10.4	10	0	0	10	10	10	9	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|288559676|ref|YP_003423162.1|	-	1.1e-22	79.8	42.7	8.2e-07	28.9	4.3	9.7	8	1	2	10	10	10	5	Bacterial	Ig-like	domain	(group	1)
CarboxypepD_reg	PF13620.6	gi|288559676|ref|YP_003423162.1|	-	1.5e-17	63.6	28.5	4.9e-05	23.5	0.9	9.0	8	1	0	9	9	9	6	Carboxypeptidase	regulatory-like	domain
MG4	PF17789.1	gi|288559676|ref|YP_003423162.1|	-	4.9e-13	49.0	14.0	0.03	14.5	0.8	6.6	6	1	0	6	6	6	5	Macroglobulin	domain	MG4
Invasin_D3	PF09134.10	gi|288559676|ref|YP_003423162.1|	-	4.1e-11	43.0	61.9	0.0001	22.5	7.1	8.8	7	2	2	9	9	9	4	Invasin,	domain	3
YtkA	PF13115.6	gi|288559676|ref|YP_003423162.1|	-	1.3e-07	32.1	5.8	0.062	13.9	0.5	5.6	6	1	1	7	7	6	3	YtkA-like
DUF1966	PF09260.11	gi|288559676|ref|YP_003423162.1|	-	7.9e-06	26.1	1.5	4.9	7.5	0.0	5.1	4	1	0	4	4	4	1	Domain	of	unknown	function	(DUF1966)
DUF824	PF05688.11	gi|288559676|ref|YP_003423162.1|	-	1.6e-05	24.6	0.5	0.0036	17.1	0.2	4.2	3	0	0	3	3	3	1	Salmonella	repeat	of	unknown	function	(DUF824)
Big_2	PF02368.18	gi|288559676|ref|YP_003423162.1|	-	6e-05	22.9	1.0	6e-05	22.9	1.0	5.4	4	2	2	6	6	6	1	Bacterial	Ig-like	domain	(group	2)
bMG3	PF11974.8	gi|288559676|ref|YP_003423162.1|	-	0.0054	16.7	6.2	0.53	10.3	0.3	5.3	6	0	0	6	6	6	1	Bacterial	alpha-2-macroglobulin	MG3	domain
Chlam_PMP	PF02415.17	gi|288559676|ref|YP_003423162.1|	-	0.044	14.3	0.1	0.044	14.3	0.1	12.4	11	0	0	11	11	11	0	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
SurE	PF01975.17	gi|288559677|ref|YP_003423163.1|	-	4.3e-46	157.2	0.0	5.2e-46	156.9	0.0	1.1	1	0	0	1	1	1	1	Survival	protein	SurE
MAF_flag10	PF01973.18	gi|288559678|ref|YP_003423164.1|	-	4.8e-33	114.3	0.0	7.1e-33	113.7	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF115
CAT	PF00302.18	gi|288559679|ref|YP_003423165.1|	-	4.5e-12	46.3	1.0	5.4e-12	46.1	1.0	1.1	1	0	0	1	1	1	1	Chloramphenicol	acetyltransferase
2-oxoacid_dh	PF00198.23	gi|288559679|ref|YP_003423165.1|	-	0.0094	15.4	0.0	0.59	9.5	0.0	2.1	2	0	0	2	2	2	2	2-oxoacid	dehydrogenases	acyltransferase	(catalytic	domain)
KKLCAg1	PF15204.6	gi|288559679|ref|YP_003423165.1|	-	0.049	13.7	0.1	0.093	12.8	0.1	1.4	1	0	0	1	1	1	0	Kita-kyushu	lung	cancer	antigen	1
AAA_16	PF13191.6	gi|288559680|ref|YP_003423166.1|	-	4.5e-06	27.1	0.0	8.9e-05	22.9	0.0	2.6	2	1	0	2	2	2	1	AAA	ATPase	domain
ATPase_2	PF01637.18	gi|288559680|ref|YP_003423166.1|	-	0.00059	19.8	1.2	0.0035	17.3	0.1	2.5	2	1	0	2	2	2	1	ATPase	domain	predominantly	from	Archaea
Cdc6_C	PF09079.11	gi|288559680|ref|YP_003423166.1|	-	0.00074	19.4	0.0	0.004	17.1	0.0	2.3	1	0	0	1	1	1	1	CDC6,	C	terminal	winged	helix	domain
AAA_22	PF13401.6	gi|288559680|ref|YP_003423166.1|	-	0.0015	18.8	0.0	0.0034	17.6	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_35	PF14516.6	gi|288559680|ref|YP_003423166.1|	-	0.0018	17.2	0.0	0.0083	15.0	0.0	1.9	2	0	0	2	2	2	1	AAA-like	domain
AAA_7	PF12775.7	gi|288559680|ref|YP_003423166.1|	-	0.012	15.1	0.1	0.23	11.0	0.0	2.2	2	0	0	2	2	2	0	P-loop	containing	dynein	motor	region
AAA_14	PF13173.6	gi|288559680|ref|YP_003423166.1|	-	0.019	15.0	0.1	0.1	12.6	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
TIP49_C	PF17856.1	gi|288559680|ref|YP_003423166.1|	-	0.037	14.2	0.0	0.093	12.9	0.0	1.7	1	0	0	1	1	1	0	TIP49	AAA-lid	domain
Archease	PF01951.16	gi|288559682|ref|YP_003423168.1|	-	4.4e-43	146.8	1.5	5e-43	146.7	1.5	1.0	1	0	0	1	1	1	1	Archease	protein	family	(MTH1598/TM1083)
RtcB	PF01139.17	gi|288559683|ref|YP_003423169.1|	-	3.2e-172	573.4	0.6	3.6e-172	573.2	0.6	1.0	1	0	0	1	1	1	1	tRNA-splicing	ligase	RtcB
PNP_UDP_1	PF01048.20	gi|288559684|ref|YP_003423170.1|	-	4.5e-42	143.9	0.1	5e-42	143.8	0.1	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
Methyltransf_28	PF02636.17	gi|288559684|ref|YP_003423170.1|	-	0.099	12.3	0.0	0.15	11.6	0.0	1.3	1	0	0	1	1	1	0	Putative	S-adenosyl-L-methionine-dependent	methyltransferase
SpoIIM	PF01944.17	gi|288559685|ref|YP_003423171.1|	-	3.4e-22	79.2	22.3	4.4e-22	78.8	22.3	1.2	1	0	0	1	1	1	1	Stage	II	sporulation	protein	M
DUF5362	PF17319.2	gi|288559685|ref|YP_003423171.1|	-	0.017	15.0	2.4	0.017	15.0	2.4	2.4	3	0	0	3	3	3	0	Family	of	unknown	function	(DUF5362)
DUF2530	PF10745.9	gi|288559685|ref|YP_003423171.1|	-	0.21	11.9	2.7	3.6	7.9	0.0	2.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2530)
DUF898	PF05987.13	gi|288559685|ref|YP_003423171.1|	-	0.3	10.1	11.9	0.042	12.9	3.5	2.0	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF898)
DUF973	PF06157.11	gi|288559685|ref|YP_003423171.1|	-	0.58	9.2	22.5	0.26	10.3	2.6	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF973)
Bac_export_2	PF01312.19	gi|288559685|ref|YP_003423171.1|	-	3.3	6.8	8.2	4.6	6.3	8.2	1.2	1	0	0	1	1	1	0	FlhB	HrpN	YscU	SpaS	Family
HTH_3	PF01381.22	gi|288559687|ref|YP_003423173.1|	-	6.2e-16	58.2	0.0	6.9e-16	58.1	0.0	1.0	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.7	gi|288559687|ref|YP_003423173.1|	-	8.3e-12	45.0	0.3	9.9e-12	44.7	0.3	1.1	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_31	PF13560.6	gi|288559687|ref|YP_003423173.1|	-	3.3e-06	27.3	0.0	3.6e-06	27.2	0.0	1.0	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_11	PF08279.12	gi|288559687|ref|YP_003423173.1|	-	8.1e-06	25.7	0.1	1.6e-05	24.7	0.1	1.4	1	0	0	1	1	1	1	HTH	domain
Phage_CI_repr	PF07022.13	gi|288559687|ref|YP_003423173.1|	-	2.6e-05	24.2	0.0	2.7e-05	24.1	0.0	1.1	1	0	0	1	1	1	1	Bacteriophage	CI	repressor	helix-turn-helix	domain
HTH_26	PF13443.6	gi|288559687|ref|YP_003423173.1|	-	0.00011	22.6	0.0	0.00013	22.4	0.0	1.1	1	0	0	1	1	1	1	Cro/C1-type	HTH	DNA-binding	domain
Sigma70_r4	PF04545.16	gi|288559687|ref|YP_003423173.1|	-	0.00015	21.2	0.0	0.00027	20.4	0.0	1.4	2	0	0	2	2	2	1	Sigma-70,	region	4
HTH_24	PF13412.6	gi|288559687|ref|YP_003423173.1|	-	0.00023	20.6	0.1	0.00039	19.9	0.1	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_23	PF13384.6	gi|288559687|ref|YP_003423173.1|	-	0.0014	18.4	0.0	0.0019	17.9	0.0	1.3	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_Crp_2	PF13545.6	gi|288559687|ref|YP_003423173.1|	-	0.0027	17.6	0.0	0.004	17.1	0.0	1.3	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
YdaS_antitoxin	PF15943.5	gi|288559687|ref|YP_003423173.1|	-	0.0042	16.9	0.0	0.0047	16.8	0.0	1.3	1	1	0	1	1	1	1	Putative	antitoxin	of	bacterial	toxin-antitoxin	system,	YdaS/YdaT
GntR	PF00392.21	gi|288559687|ref|YP_003423173.1|	-	0.0067	16.1	0.0	0.011	15.4	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HTH_38	PF13936.6	gi|288559687|ref|YP_003423173.1|	-	0.0084	15.9	0.1	0.013	15.2	0.1	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR_2	PF12802.7	gi|288559687|ref|YP_003423173.1|	-	0.012	15.5	0.0	0.016	15.1	0.0	1.2	1	0	0	1	1	1	0	MarR	family
KORA	PF16509.5	gi|288559687|ref|YP_003423173.1|	-	0.016	15.5	0.0	0.017	15.4	0.0	1.2	1	0	0	1	1	1	0	TrfB	plasmid	transcriptional	repressor
HTH_10	PF04967.12	gi|288559687|ref|YP_003423173.1|	-	0.022	14.5	0.0	0.045	13.6	0.0	1.5	1	0	0	1	1	1	0	HTH	DNA	binding	domain
HTH_AsnC-type	PF13404.6	gi|288559687|ref|YP_003423173.1|	-	0.044	13.6	0.0	0.068	13.0	0.0	1.3	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
Sigma70_r4_2	PF08281.12	gi|288559687|ref|YP_003423173.1|	-	0.046	13.4	0.0	0.065	12.9	0.0	1.2	1	0	0	1	1	1	0	Sigma-70,	region	4
MarR	PF01047.22	gi|288559687|ref|YP_003423173.1|	-	0.047	13.6	0.0	0.089	12.7	0.0	1.5	2	0	0	2	2	2	0	MarR	family
HTH_7	PF02796.15	gi|288559687|ref|YP_003423173.1|	-	0.088	12.9	0.1	0.17	12.0	0.1	1.6	2	0	0	2	2	1	0	Helix-turn-helix	domain	of	resolvase
HTH_17	PF12728.7	gi|288559687|ref|YP_003423173.1|	-	0.091	13.0	0.0	0.16	12.2	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_28	PF13518.6	gi|288559687|ref|YP_003423173.1|	-	0.11	12.7	0.0	0.18	11.9	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HypA	PF01155.19	gi|288559688|ref|YP_003423174.1|	-	0.00095	19.2	0.1	0.0015	18.5	0.1	1.3	1	0	0	1	1	1	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Zn-ribbon_8	PF09723.10	gi|288559688|ref|YP_003423174.1|	-	0.0068	16.5	0.7	0.026	14.7	0.7	2.0	1	0	0	1	1	1	1	Zinc	ribbon	domain
TFIIS_C	PF01096.18	gi|288559688|ref|YP_003423174.1|	-	0.086	12.7	5.1	2.3	8.1	0.8	2.6	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zf_UBZ	PF18439.1	gi|288559688|ref|YP_003423174.1|	-	0.58	9.8	5.4	37	4.0	0.3	3.3	3	0	0	3	3	3	0	Ubiquitin-Binding	Zinc	Finger
Tocopherol_cycl	PF14249.6	gi|288559689|ref|YP_003423175.1|	-	2.9e-11	43.1	0.9	3.8e-11	42.7	0.9	1.1	1	0	0	1	1	1	1	Tocopherol	cyclase
DDE_Tnp_1	PF01609.21	gi|288559691|ref|YP_003423177.1|	-	5.2e-16	59.0	0.7	8.8e-16	58.2	0.7	1.3	1	0	0	1	1	1	1	Transposase	DDE	domain
Skp1	PF01466.19	gi|288559691|ref|YP_003423177.1|	-	0.07	13.3	0.1	0.17	12.0	0.1	1.7	1	0	0	1	1	1	0	Skp1	family,	dimerisation	domain
DUF3173	PF11372.8	gi|288559691|ref|YP_003423177.1|	-	0.13	12.2	2.2	0.22	11.4	0.3	2.5	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF3173)
AAA	PF00004.29	gi|288559692|ref|YP_003423178.1|	-	3.3e-98	325.2	0.2	2.2e-48	164.0	0.0	2.8	3	0	0	3	3	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_lid_3	PF17862.1	gi|288559692|ref|YP_003423178.1|	-	5e-31	106.2	3.5	9.6e-16	57.3	1.5	2.7	2	0	0	2	2	2	2	AAA+	lid	domain
CDC48_N	PF02359.18	gi|288559692|ref|YP_003423178.1|	-	7.4e-24	83.7	1.1	2.3e-22	79.0	1.4	3.2	4	0	0	4	4	2	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
AAA_2	PF07724.14	gi|288559692|ref|YP_003423178.1|	-	2e-17	63.9	0.0	1.1e-08	35.4	0.0	3.0	3	0	0	3	3	2	2	AAA	domain	(Cdc48	subfamily)
RuvB_N	PF05496.12	gi|288559692|ref|YP_003423178.1|	-	4.2e-13	49.3	0.0	2.6e-06	27.3	0.0	2.9	2	1	0	2	2	2	2	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
CDC48_2	PF02933.17	gi|288559692|ref|YP_003423178.1|	-	6.3e-13	48.3	0.2	1.5e-12	47.1	0.2	1.7	1	0	0	1	1	1	1	Cell	division	protein	48	(CDC48),	domain	2
AAA_16	PF13191.6	gi|288559692|ref|YP_003423178.1|	-	1.9e-12	47.9	0.1	0.00018	21.9	0.0	4.4	2	2	0	3	3	3	2	AAA	ATPase	domain
AAA_33	PF13671.6	gi|288559692|ref|YP_003423178.1|	-	5.2e-11	42.9	0.0	6.2e-06	26.4	0.0	2.7	2	1	0	2	2	2	2	AAA	domain
AAA_22	PF13401.6	gi|288559692|ref|YP_003423178.1|	-	3.1e-10	40.5	0.2	0.0023	18.2	0.0	4.0	2	2	1	3	3	3	2	AAA	domain
AAA_14	PF13173.6	gi|288559692|ref|YP_003423178.1|	-	4.8e-10	39.6	0.0	0.0004	20.4	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
TIP49	PF06068.13	gi|288559692|ref|YP_003423178.1|	-	1.6e-09	37.5	0.8	0.00022	20.6	0.0	2.9	3	0	0	3	3	3	2	TIP49	P-loop	domain
AAA_5	PF07728.14	gi|288559692|ref|YP_003423178.1|	-	6.5e-08	32.7	1.2	0.015	15.3	0.1	4.1	2	2	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
AAA_18	PF13238.6	gi|288559692|ref|YP_003423178.1|	-	3.9e-07	30.7	0.2	0.31	11.6	0.0	3.6	3	0	0	3	3	3	2	AAA	domain
AAA_25	PF13481.6	gi|288559692|ref|YP_003423178.1|	-	8.4e-07	28.8	0.9	2.2	7.8	0.0	4.6	5	0	0	5	5	4	2	AAA	domain
Sigma54_activat	PF00158.26	gi|288559692|ref|YP_003423178.1|	-	3.2e-06	27.0	0.1	0.029	14.1	0.0	3.3	4	1	0	4	4	2	2	Sigma-54	interaction	domain
Mg_chelatase	PF01078.21	gi|288559692|ref|YP_003423178.1|	-	3.2e-06	26.7	0.8	0.034	13.5	0.2	2.5	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_3	PF07726.11	gi|288559692|ref|YP_003423178.1|	-	4.7e-06	26.5	0.0	0.091	12.6	0.0	2.6	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
Zeta_toxin	PF06414.12	gi|288559692|ref|YP_003423178.1|	-	1.2e-05	24.6	0.1	0.089	12.1	0.0	2.5	2	0	0	2	2	2	2	Zeta	toxin
AAA_28	PF13521.6	gi|288559692|ref|YP_003423178.1|	-	1.5e-05	25.3	0.0	0.025	14.8	0.0	2.7	3	0	0	3	3	2	1	AAA	domain
RNA_helicase	PF00910.22	gi|288559692|ref|YP_003423178.1|	-	1.6e-05	25.2	0.0	0.15	12.4	0.0	3.0	2	0	0	2	2	2	2	RNA	helicase
AAA_24	PF13479.6	gi|288559692|ref|YP_003423178.1|	-	2e-05	24.4	0.0	0.19	11.4	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
IstB_IS21	PF01695.17	gi|288559692|ref|YP_003423178.1|	-	2.7e-05	24.0	0.0	0.1	12.3	0.0	2.4	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
Bac_DnaA	PF00308.18	gi|288559692|ref|YP_003423178.1|	-	3.6e-05	23.7	0.0	0.054	13.3	0.0	3.1	2	1	1	3	3	3	1	Bacterial	dnaA	protein
ATPase	PF06745.13	gi|288559692|ref|YP_003423178.1|	-	6.2e-05	22.4	0.5	0.99	8.7	0.0	4.0	3	1	1	4	4	4	2	KaiC
AAA_7	PF12775.7	gi|288559692|ref|YP_003423178.1|	-	7.3e-05	22.4	0.0	0.15	11.5	0.0	2.8	3	0	0	3	3	2	2	P-loop	containing	dynein	motor	region
DUF815	PF05673.13	gi|288559692|ref|YP_003423178.1|	-	7.3e-05	22.0	0.0	0.17	11.0	0.0	2.5	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
Viral_helicase1	PF01443.18	gi|288559692|ref|YP_003423178.1|	-	9.5e-05	22.2	0.0	0.12	12.1	0.0	2.3	2	0	0	2	2	2	2	Viral	(Superfamily	1)	RNA	helicase
NB-ARC	PF00931.22	gi|288559692|ref|YP_003423178.1|	-	0.00016	21.0	0.0	0.38	9.9	0.0	2.9	3	0	0	3	3	3	2	NB-ARC	domain
ABC_tran	PF00005.27	gi|288559692|ref|YP_003423178.1|	-	0.00016	22.2	0.0	1.1	9.7	0.0	2.6	2	0	0	2	2	2	2	ABC	transporter
NACHT	PF05729.12	gi|288559692|ref|YP_003423178.1|	-	0.00017	21.6	0.3	1.5	8.7	0.0	3.5	4	0	0	4	4	4	2	NACHT	domain
DUF2075	PF09848.9	gi|288559692|ref|YP_003423178.1|	-	0.00024	20.5	0.0	0.15	11.3	0.0	2.3	2	0	0	2	2	2	2	Uncharacterized	conserved	protein	(DUF2075)
PhoH	PF02562.16	gi|288559692|ref|YP_003423178.1|	-	0.00031	20.3	0.4	0.32	10.4	0.0	3.2	3	0	0	3	3	3	1	PhoH-like	protein
AAA_30	PF13604.6	gi|288559692|ref|YP_003423178.1|	-	0.00045	20.0	0.1	0.87	9.3	0.0	2.8	2	0	0	2	2	2	2	AAA	domain
TsaE	PF02367.17	gi|288559692|ref|YP_003423178.1|	-	0.00056	19.9	0.0	0.85	9.6	0.0	2.5	2	0	0	2	2	2	2	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_17	PF13207.6	gi|288559692|ref|YP_003423178.1|	-	0.0008	19.8	0.0	2.5	8.5	0.0	2.9	2	0	0	2	2	2	2	AAA	domain
Parvo_NS1	PF01057.17	gi|288559692|ref|YP_003423178.1|	-	0.002	17.3	0.1	0.84	8.7	0.0	2.2	2	0	0	2	2	2	1	Parvovirus	non-structural	protein	NS1
AAA_11	PF13086.6	gi|288559692|ref|YP_003423178.1|	-	0.0024	17.7	0.0	0.22	11.3	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
ATPase_2	PF01637.18	gi|288559692|ref|YP_003423178.1|	-	0.0048	16.8	0.1	3.7	7.4	0.0	3.4	2	2	0	3	3	3	1	ATPase	domain	predominantly	from	Archaea
ATP-synt_ab	PF00006.25	gi|288559692|ref|YP_003423178.1|	-	0.0068	16.1	0.0	3.4	7.3	0.0	2.4	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ResIII	PF04851.15	gi|288559692|ref|YP_003423178.1|	-	0.019	15.0	0.0	1.9	8.5	0.0	2.4	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
AAA_19	PF13245.6	gi|288559692|ref|YP_003423178.1|	-	0.037	14.3	1.5	12	6.2	0.3	3.2	3	1	0	3	3	2	0	AAA	domain
cobW	PF02492.19	gi|288559692|ref|YP_003423178.1|	-	0.045	13.3	0.4	12	5.4	0.0	2.7	3	0	0	3	3	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
AFG1_ATPase	PF03969.16	gi|288559692|ref|YP_003423178.1|	-	0.074	11.9	0.0	2.6	6.9	0.0	2.3	2	0	0	2	2	2	0	AFG1-like	ATPase
Torsin	PF06309.11	gi|288559692|ref|YP_003423178.1|	-	0.12	12.5	0.1	13	5.9	0.0	2.7	3	0	0	3	3	2	0	Torsin
DAP3	PF10236.9	gi|288559692|ref|YP_003423178.1|	-	0.2	10.8	0.0	7.5	5.6	0.0	2.2	2	0	0	2	2	2	0	Mitochondrial	ribosomal	death-associated	protein	3
Vps4_C	PF09336.10	gi|288559692|ref|YP_003423178.1|	-	0.33	11.0	1.1	23	5.1	0.2	2.8	2	0	0	2	2	2	0	Vps4	C	terminal	oligomerisation	domain
DUF2099	PF09872.9	gi|288559693|ref|YP_003423179.1|	-	2.3e-106	354.7	0.3	2.6e-106	354.6	0.3	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2099)
QueC	PF06508.13	gi|288559694|ref|YP_003423180.1|	-	1.4e-57	194.6	0.0	1.7e-57	194.4	0.0	1.0	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
ThiI	PF02568.14	gi|288559694|ref|YP_003423180.1|	-	1.4e-08	34.5	0.2	1.2e-07	31.5	0.2	2.0	1	1	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
NAD_synthase	PF02540.17	gi|288559694|ref|YP_003423180.1|	-	9.5e-06	24.9	0.2	7.1e-05	22.0	0.1	2.0	2	0	0	2	2	2	1	NAD	synthase
ATP_bind_3	PF01171.20	gi|288559694|ref|YP_003423180.1|	-	2.8e-05	23.9	0.0	0.0003	20.6	0.0	2.0	2	0	0	2	2	2	1	PP-loop	family
Arginosuc_synth	PF00764.19	gi|288559694|ref|YP_003423180.1|	-	0.00072	19.0	0.0	0.0053	16.1	0.0	1.9	2	0	0	2	2	2	1	Arginosuccinate	synthase
Asn_synthase	PF00733.21	gi|288559694|ref|YP_003423180.1|	-	0.00094	18.9	0.0	0.0013	18.5	0.0	1.1	1	0	0	1	1	1	1	Asparagine	synthase
tRNA_Me_trans	PF03054.16	gi|288559694|ref|YP_003423180.1|	-	0.0054	15.6	0.0	0.017	13.9	0.0	1.7	2	0	0	2	2	2	1	tRNA	methyl	transferase
PTPS	PF01242.19	gi|288559695|ref|YP_003423181.1|	-	3.7e-21	75.4	0.0	4.1e-21	75.2	0.0	1.0	1	0	0	1	1	1	1	6-pyruvoyl	tetrahydropterin	synthase
Fer4_14	PF13394.6	gi|288559696|ref|YP_003423182.1|	-	3.4e-13	49.8	0.5	1.7e-12	47.5	0.1	2.0	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Radical_SAM	PF04055.21	gi|288559696|ref|YP_003423182.1|	-	1.8e-12	48.0	0.1	4.7e-12	46.6	0.1	1.6	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|288559696|ref|YP_003423182.1|	-	3.3e-11	43.6	0.0	5.8e-11	42.8	0.0	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Usp	PF00582.26	gi|288559697|ref|YP_003423183.1|	-	2.2e-28	99.5	0.8	2.5e-28	99.4	0.8	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
DXP_reductoisom	PF02670.16	gi|288559697|ref|YP_003423183.1|	-	0.0017	19.1	0.1	0.027	15.2	0.1	2.1	1	1	1	2	2	2	1	1-deoxy-D-xylulose	5-phosphate	reductoisomerase
DUF5105	PF17118.5	gi|288559697|ref|YP_003423183.1|	-	0.018	14.8	0.3	0.023	14.5	0.3	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5105)
Chorismate_synt	PF01264.21	gi|288559697|ref|YP_003423183.1|	-	0.029	13.1	0.4	3	6.5	0.0	2.0	1	1	1	2	2	2	0	Chorismate	synthase
ETF	PF01012.21	gi|288559697|ref|YP_003423183.1|	-	0.039	13.8	0.7	0.69	9.8	0.7	2.2	1	1	0	1	1	1	0	Electron	transfer	flavoprotein	domain
Fic_N	PF13784.6	gi|288559697|ref|YP_003423183.1|	-	0.052	13.6	0.1	0.089	12.8	0.1	1.4	1	0	0	1	1	1	0	Fic/DOC	family	N-terminal
NRIP1_repr_4	PF15690.5	gi|288559697|ref|YP_003423183.1|	-	0.081	12.2	0.0	0.096	12.0	0.0	1.1	1	0	0	1	1	1	0	Nuclear	receptor-interacting	protein	1	repression	4
MtrA	PF04208.14	gi|288559698|ref|YP_003423184.1|	-	4.1e-85	283.7	0.7	4.8e-85	283.5	0.7	1.0	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase,	subunit	A
MarR	PF01047.22	gi|288559699|ref|YP_003423185.1|	-	2.8e-08	33.6	0.0	4.2e-08	33.0	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_34	PF13601.6	gi|288559699|ref|YP_003423185.1|	-	5.1e-07	29.8	1.4	6.2e-07	29.5	0.5	1.5	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_24	PF13412.6	gi|288559699|ref|YP_003423185.1|	-	3.1e-06	26.6	0.0	5.6e-06	25.8	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.7	gi|288559699|ref|YP_003423185.1|	-	4.8e-05	23.2	0.0	6.3e-05	22.8	0.0	1.2	1	0	0	1	1	1	1	MarR	family
RPA_C	PF08784.11	gi|288559699|ref|YP_003423185.1|	-	6.4e-05	23.6	0.0	9e-05	23.1	0.0	1.3	1	0	0	1	1	1	1	Replication	protein	A	C	terminal
HTH_27	PF13463.6	gi|288559699|ref|YP_003423185.1|	-	0.00037	20.9	0.0	0.00062	20.2	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.19	gi|288559699|ref|YP_003423185.1|	-	0.0018	18.1	0.4	0.0027	17.6	0.4	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HxlR	PF01638.17	gi|288559699|ref|YP_003423185.1|	-	0.0035	17.1	0.1	0.006	16.4	0.1	1.3	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
SMC_ScpB	PF04079.16	gi|288559699|ref|YP_003423185.1|	-	0.0043	16.7	0.1	0.0058	16.3	0.1	1.2	1	0	0	1	1	1	1	Segregation	and	condensation	complex	subunit	ScpB
PadR	PF03551.14	gi|288559699|ref|YP_003423185.1|	-	0.0071	16.3	0.2	0.014	15.4	0.2	1.5	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_38	PF13936.6	gi|288559699|ref|YP_003423185.1|	-	0.01	15.6	0.1	0.028	14.2	0.0	1.7	2	0	0	2	2	2	0	Helix-turn-helix	domain
Csm4_C	PF17953.1	gi|288559699|ref|YP_003423185.1|	-	0.015	15.1	0.3	0.034	14.0	0.1	1.7	2	0	0	2	2	2	0	CRISPR	Csm4	C-terminal	domain
UCMA	PF17085.5	gi|288559699|ref|YP_003423185.1|	-	0.037	14.0	1.8	0.047	13.7	1.8	1.2	1	0	0	1	1	1	0	Unique	cartilage	matrix	associated	protein
Phage_antitermQ	PF06530.12	gi|288559699|ref|YP_003423185.1|	-	0.046	13.6	0.1	0.093	12.6	0.1	1.6	1	0	0	1	1	1	0	Phage	antitermination	protein	Q
RNA_pol_Rpc34	PF05158.12	gi|288559699|ref|YP_003423185.1|	-	0.066	12.6	0.5	0.066	12.6	0.5	1.5	2	0	0	2	2	2	0	RNA	polymerase	Rpc34	subunit
HTH_6	PF01418.17	gi|288559699|ref|YP_003423185.1|	-	0.066	13.2	0.0	0.12	12.4	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain,	rpiR	family
LexA_DNA_bind	PF01726.16	gi|288559699|ref|YP_003423185.1|	-	0.067	13.0	0.0	0.13	12.0	0.0	1.5	1	0	0	1	1	1	0	LexA	DNA	binding	domain
HTH_54	PF18607.1	gi|288559699|ref|YP_003423185.1|	-	0.082	13.0	2.4	0.16	12.1	1.7	1.8	1	1	1	2	2	2	0	ParA	helix	turn	helix	domain
GerE	PF00196.19	gi|288559699|ref|YP_003423185.1|	-	0.12	12.0	0.2	0.27	10.8	0.0	1.7	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
adh_short_C2	PF13561.6	gi|288559700|ref|YP_003423186.1|	-	4.8e-65	219.4	0.8	5.5e-65	219.2	0.8	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.25	gi|288559700|ref|YP_003423186.1|	-	3.2e-55	186.6	3.3	3.7e-55	186.4	3.3	1.0	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.10	gi|288559700|ref|YP_003423186.1|	-	4.7e-13	49.4	0.3	6.2e-13	49.0	0.3	1.1	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.21	gi|288559700|ref|YP_003423186.1|	-	0.0025	17.3	0.4	0.0046	16.5	0.4	1.5	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
Polysacc_synt_2	PF02719.15	gi|288559700|ref|YP_003423186.1|	-	0.004	16.3	0.2	0.0056	15.9	0.2	1.2	1	0	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_10	PF13460.6	gi|288559700|ref|YP_003423186.1|	-	0.008	16.1	0.1	0.011	15.7	0.1	1.2	1	0	0	1	1	1	1	NAD(P)H-binding
DFP	PF04127.15	gi|288559700|ref|YP_003423186.1|	-	0.018	14.9	0.4	0.039	13.8	0.4	1.5	1	1	0	1	1	1	0	DNA	/	pantothenate	metabolism	flavoprotein
3HCDH_N	PF02737.18	gi|288559700|ref|YP_003423186.1|	-	0.022	14.7	0.4	0.032	14.1	0.4	1.3	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
ORF6N	PF10543.9	gi|288559700|ref|YP_003423186.1|	-	0.099	12.9	0.0	0.17	12.1	0.0	1.4	1	0	0	1	1	1	0	ORF6N	domain
ThiC_Rad_SAM	PF01964.18	gi|288559701|ref|YP_003423187.1|	-	2.2e-190	632.9	0.3	2.5e-190	632.7	0.3	1.0	1	0	0	1	1	1	1	Radical	SAM	ThiC	family
DNA_ligase_A_M	PF01068.21	gi|288559702|ref|YP_003423188.1|	-	1.7e-49	168.2	0.0	2.8e-49	167.6	0.0	1.3	1	0	0	1	1	1	1	ATP	dependent	DNA	ligase	domain
DNA_ligase_A_N	PF04675.14	gi|288559702|ref|YP_003423188.1|	-	6.5e-40	137.3	0.7	1.6e-38	132.7	0.2	2.6	2	1	1	3	3	3	2	DNA	ligase	N	terminus
DNA_ligase_A_C	PF04679.15	gi|288559702|ref|YP_003423188.1|	-	9.9e-19	67.8	0.0	2e-18	66.8	0.0	1.5	1	0	0	1	1	1	1	ATP	dependent	DNA	ligase	C	terminal	region
RNA_ligase	PF09414.10	gi|288559702|ref|YP_003423188.1|	-	0.0041	17.4	0.0	0.0093	16.3	0.0	1.6	1	0	0	1	1	1	1	RNA	ligase
Polysacc_synt_2	PF02719.15	gi|288559702|ref|YP_003423188.1|	-	0.032	13.3	0.1	0.06	12.5	0.1	1.4	1	0	0	1	1	1	0	Polysaccharide	biosynthesis	protein
tRNA_anti-codon	PF01336.25	gi|288559703|ref|YP_003423189.1|	-	2.1e-07	30.8	0.1	3.6e-07	30.1	0.1	1.4	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA_anti_2	PF13742.6	gi|288559703|ref|YP_003423189.1|	-	2.2e-06	27.8	0.0	3e-06	27.3	0.0	1.2	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
MrpF_PhaF	PF04066.13	gi|288559703|ref|YP_003423189.1|	-	0.00056	20.3	0.3	0.00085	19.7	0.3	1.3	1	0	0	1	1	1	1	Multiple	resistance	and	pH	regulation	protein	F	(MrpF	/	PhaF)
DUF2393	PF09624.10	gi|288559703|ref|YP_003423189.1|	-	0.0018	18.3	0.8	0.0024	17.9	0.2	1.5	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2393)
FLgD_tudor	PF13861.6	gi|288559703|ref|YP_003423189.1|	-	0.0047	17.1	0.6	0.019	15.2	0.1	2.0	2	0	0	2	2	2	1	FlgD	Tudor-like	domain
DUF4539	PF15072.6	gi|288559703|ref|YP_003423189.1|	-	0.017	15.2	0.0	0.036	14.1	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4539)
tRNA_anti-like	PF12869.7	gi|288559703|ref|YP_003423189.1|	-	0.021	14.4	1.0	0.053	13.1	1.0	1.7	1	1	0	1	1	1	0	tRNA_anti-like
HIN	PF02760.15	gi|288559703|ref|YP_003423189.1|	-	0.083	12.6	0.0	0.13	12.0	0.0	1.3	1	0	0	1	1	1	0	HIN-200/IF120x	domain
MazE_antitoxin	PF04014.18	gi|288559705|ref|YP_003423191.1|	-	0.0012	18.7	0.1	0.0018	18.1	0.1	1.3	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE,	bacterial	antitoxin
PGM_PMM_I	PF02878.16	gi|288559706|ref|YP_003423192.1|	-	1.6e-37	128.3	0.0	4.1e-37	127.0	0.0	1.7	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_II	PF02879.16	gi|288559706|ref|YP_003423192.1|	-	1.1e-30	106.3	0.0	2.4e-30	105.2	0.0	1.6	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_III	PF02880.16	gi|288559706|ref|YP_003423192.1|	-	2.7e-27	95.2	0.0	4.3e-27	94.6	0.0	1.3	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_IV	PF00408.20	gi|288559706|ref|YP_003423192.1|	-	4.7e-12	45.9	0.0	1.2e-11	44.6	0.0	1.7	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
DUF3309	PF11752.8	gi|288559707|ref|YP_003423193.1|	-	0.036	14.1	0.9	0.059	13.4	0.9	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3309)
DUF2716	PF10898.8	gi|288559707|ref|YP_003423193.1|	-	0.14	12.6	0.1	0.31	11.4	0.0	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2716)
TPR_1	PF00515.28	gi|288559709|ref|YP_003423195.1|	-	1.8e-49	163.6	3.2	2.8e-10	39.6	0.2	7.3	7	0	0	7	7	7	6	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|288559709|ref|YP_003423195.1|	-	1.5e-48	159.0	0.8	3.7e-08	32.9	0.2	7.3	7	0	0	7	7	7	7	Tetratricopeptide	repeat
TPR_11	PF13414.6	gi|288559709|ref|YP_003423195.1|	-	5.2e-43	144.5	8.9	4e-09	36.0	0.0	7.2	3	3	3	7	7	7	6	TPR	repeat
TPR_8	PF13181.6	gi|288559709|ref|YP_003423195.1|	-	1.4e-38	127.9	4.5	1.1e-06	28.4	0.0	8.0	8	0	0	8	8	7	6	Tetratricopeptide	repeat
TPR_17	PF13431.6	gi|288559709|ref|YP_003423195.1|	-	7.1e-29	98.1	7.4	0.0011	19.2	0.2	7.6	7	0	0	7	7	7	6	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|288559709|ref|YP_003423195.1|	-	2e-26	90.4	0.1	0.00068	20.2	0.0	7.2	1	1	6	7	7	7	7	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|288559709|ref|YP_003423195.1|	-	6.7e-25	87.2	4.1	3.7e-11	43.2	1.1	5.8	3	2	3	6	6	6	4	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|288559709|ref|YP_003423195.1|	-	3.6e-23	81.9	0.0	1.9e-08	34.8	0.0	4.2	3	1	1	4	4	4	3	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|288559709|ref|YP_003423195.1|	-	1.6e-20	73.3	5.6	3.1e-05	24.4	0.0	5.2	3	1	1	5	5	5	4	Tetratricopeptide	repeat
TPR_7	PF13176.6	gi|288559709|ref|YP_003423195.1|	-	2.1e-20	71.2	2.6	0.0013	18.6	0.0	6.6	6	0	0	6	6	6	5	Tetratricopeptide	repeat
TPR_9	PF13371.6	gi|288559709|ref|YP_003423195.1|	-	1.3e-17	63.7	0.0	9.3e-05	22.5	0.1	4.1	3	1	1	4	4	4	3	Tetratricopeptide	repeat
TPR_10	PF13374.6	gi|288559709|ref|YP_003423195.1|	-	1.3e-10	40.7	9.1	0.0028	17.5	0.4	6.3	7	0	0	7	7	7	2	Tetratricopeptide	repeat
NRBF2_MIT	PF17169.4	gi|288559709|ref|YP_003423195.1|	-	1.3e-08	35.0	0.3	0.0035	17.5	0.0	4.2	2	2	2	4	4	4	1	MIT	domain	of	nuclear	receptor-binding	factor	2
ANAPC3	PF12895.7	gi|288559709|ref|YP_003423195.1|	-	3.9e-08	33.4	0.0	0.021	15.0	0.0	3.7	1	1	3	5	5	5	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
Fis1_TPR_C	PF14853.6	gi|288559709|ref|YP_003423195.1|	-	3.7e-07	30.1	4.2	4.4	7.4	0.0	6.8	8	0	0	8	8	7	1	Fis1	C-terminal	tetratricopeptide	repeat
ASCH	PF04266.14	gi|288559709|ref|YP_003423195.1|	-	6.4e-07	29.9	0.9	1.2e-06	29.1	0.9	1.4	1	0	0	1	1	1	1	ASCH	domain
TPR_21	PF09976.9	gi|288559709|ref|YP_003423195.1|	-	2.5e-06	27.4	0.3	0.25	11.0	0.0	3.8	2	1	1	3	3	3	2	Tetratricopeptide	repeat-like	domain
TPR_6	PF13174.6	gi|288559709|ref|YP_003423195.1|	-	3e-06	27.5	0.7	5.9	7.8	0.0	6.3	8	0	0	8	8	7	0	Tetratricopeptide	repeat
BTAD	PF03704.17	gi|288559709|ref|YP_003423195.1|	-	0.00014	22.3	0.0	4.3	7.8	0.0	3.5	2	1	1	3	3	3	2	Bacterial	transcriptional	activator	domain
TPR_15	PF13429.6	gi|288559709|ref|YP_003423195.1|	-	0.00026	20.3	0.0	3.1	6.9	0.0	3.8	2	1	1	3	3	3	2	Tetratricopeptide	repeat
NARP1	PF12569.8	gi|288559709|ref|YP_003423195.1|	-	0.00031	19.8	6.9	0.4	9.5	0.1	3.7	2	1	2	4	4	4	3	NMDA	receptor-regulated	protein	1
MIT	PF04212.18	gi|288559709|ref|YP_003423195.1|	-	0.00051	20.0	8.9	3.4	7.8	0.1	5.4	5	1	1	6	6	5	2	MIT	(microtubule	interacting	and	transport)	domain
DUF3856	PF12968.7	gi|288559709|ref|YP_003423195.1|	-	0.002	18.2	2.2	0.33	11.0	0.1	4.3	3	2	2	5	5	5	1	Domain	of	Unknown	Function	(DUF3856)
TPR_4	PF07721.14	gi|288559709|ref|YP_003423195.1|	-	0.0058	17.1	0.0	4.6	8.2	0.1	4.1	4	0	0	4	4	3	1	Tetratricopeptide	repeat
RPN7	PF10602.9	gi|288559709|ref|YP_003423195.1|	-	0.0068	16.1	1.7	1.4	8.6	0.1	3.8	2	1	2	4	4	4	1	26S	proteasome	subunit	RPN7
SNAP	PF14938.6	gi|288559709|ref|YP_003423195.1|	-	0.016	14.7	0.1	0.11	11.9	0.0	2.5	2	1	0	3	3	3	0	Soluble	NSF	attachment	protein,	SNAP
Coatomer_E	PF04733.14	gi|288559709|ref|YP_003423195.1|	-	0.026	14.0	0.6	4.9	6.5	0.0	3.1	2	1	0	3	3	3	0	Coatomer	epsilon	subunit
Alkyl_sulf_dimr	PF14863.6	gi|288559709|ref|YP_003423195.1|	-	0.028	14.9	0.1	18	5.8	0.0	3.7	2	1	1	3	3	3	0	Alkyl	sulfatase	dimerisation
Sda	PF08970.10	gi|288559709|ref|YP_003423195.1|	-	0.044	13.5	3.4	16	5.4	0.1	3.6	3	0	0	3	3	3	0	Sporulation	inhibitor	A
TPR_MalT	PF17874.1	gi|288559709|ref|YP_003423195.1|	-	0.068	12.5	0.0	0.15	11.4	0.0	1.7	1	0	0	1	1	1	0	MalT-like	TPR	region
SHNi-TPR	PF10516.9	gi|288559709|ref|YP_003423195.1|	-	1.4	8.4	7.0	36	3.9	0.0	4.4	5	0	0	5	5	5	0	SHNi-TPR
Radical_SAM	PF04055.21	gi|288559710|ref|YP_003423196.1|	-	1.8e-19	70.7	0.0	6.4e-19	68.9	0.0	1.8	1	1	1	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|288559710|ref|YP_003423196.1|	-	4.4e-10	40.0	0.0	1.6e-09	38.2	0.0	1.8	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|288559710|ref|YP_003423196.1|	-	1.2e-09	38.3	0.0	1.2e-08	35.1	0.0	2.2	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Aminotran_1_2	PF00155.21	gi|288559711|ref|YP_003423197.1|	-	4.9e-52	177.3	0.0	5.6e-52	177.1	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.19	gi|288559711|ref|YP_003423197.1|	-	0.001	18.1	0.0	0.052	12.5	0.0	2.5	2	1	0	2	2	2	1	Aminotransferase	class-V
DegT_DnrJ_EryC1	PF01041.17	gi|288559711|ref|YP_003423197.1|	-	0.0055	16.0	0.0	0.0088	15.4	0.0	1.2	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Alliinase_C	PF04864.13	gi|288559711|ref|YP_003423197.1|	-	0.0068	15.3	0.0	0.025	13.5	0.0	1.8	1	1	0	2	2	2	1	Allinase
Cys_Met_Meta_PP	PF01053.20	gi|288559711|ref|YP_003423197.1|	-	0.012	14.2	0.0	0.016	13.8	0.0	1.2	1	0	0	1	1	1	0	Cys/Met	metabolism	PLP-dependent	enzyme
NAPRTase_C	PF17956.1	gi|288559711|ref|YP_003423197.1|	-	0.014	15.8	0.0	0.27	11.7	0.0	2.5	3	0	0	3	3	3	0	Nicotinate	phosphoribosyltransferase	C-terminal	domain
Hexapep	PF00132.24	gi|288559712|ref|YP_003423198.1|	-	3.2e-22	77.4	21.0	3e-11	42.6	4.5	4.2	3	1	1	4	4	4	4	Bacterial	transferase	hexapeptide	(six	repeats)
Hexapep_2	PF14602.6	gi|288559712|ref|YP_003423198.1|	-	4.8e-11	42.2	22.4	3.9e-08	32.9	5.4	4.1	1	1	3	4	4	4	3	Hexapeptide	repeat	of	succinyl-transferase
Fucokinase	PF07959.12	gi|288559712|ref|YP_003423198.1|	-	0.0095	14.9	0.8	0.045	12.7	0.4	2.0	1	1	1	2	2	2	1	L-fucokinase
DUF4954	PF16314.5	gi|288559712|ref|YP_003423198.1|	-	0.029	12.5	2.2	0.036	12.2	2.2	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4954)
NTP_transferase	PF00483.23	gi|288559713|ref|YP_003423199.1|	-	3.1e-53	180.9	0.0	4e-53	180.5	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
Hexapep	PF00132.24	gi|288559713|ref|YP_003423199.1|	-	3.2e-19	67.9	16.3	2.5e-07	30.1	0.1	4.4	2	1	2	4	4	4	4	Bacterial	transferase	hexapeptide	(six	repeats)
NTP_transf_3	PF12804.7	gi|288559713|ref|YP_003423199.1|	-	2.9e-15	57.0	0.0	3.8e-15	56.6	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep_2	PF14602.6	gi|288559713|ref|YP_003423199.1|	-	7.3e-08	32.0	14.2	0.00049	19.8	0.6	4.3	4	0	0	4	4	4	3	Hexapeptide	repeat	of	succinyl-transferase
CTP_transf_3	PF02348.19	gi|288559713|ref|YP_003423199.1|	-	0.0007	19.6	0.0	0.0011	19.0	0.0	1.2	1	0	0	1	1	1	1	Cytidylyltransferase
DUF4954	PF16314.5	gi|288559713|ref|YP_003423199.1|	-	0.0018	16.5	0.6	0.003	15.8	0.6	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4954)
IspD	PF01128.19	gi|288559713|ref|YP_003423199.1|	-	0.0023	17.7	0.0	0.0036	17.1	0.0	1.3	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
Fucokinase	PF07959.12	gi|288559713|ref|YP_003423199.1|	-	0.019	13.9	0.7	0.084	11.8	0.4	2.2	2	1	0	2	2	2	0	L-fucokinase
Rubredoxin	PF00301.20	gi|288559714|ref|YP_003423200.1|	-	4.3e-12	45.9	6.0	4.9e-12	45.7	6.0	1.1	1	0	0	1	1	1	1	Rubredoxin
zinc_ribbon_10	PF10058.9	gi|288559714|ref|YP_003423200.1|	-	0.018	14.7	2.0	1.6	8.5	0.9	2.1	2	0	0	2	2	2	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
HypA	PF01155.19	gi|288559714|ref|YP_003423200.1|	-	0.032	14.3	0.1	0.032	14.3	0.1	1.1	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Zn_ribbon_SprT	PF17283.2	gi|288559714|ref|YP_003423200.1|	-	0.15	12.0	2.8	1.9	8.5	0.0	2.1	2	0	0	2	2	2	0	SprT-like	zinc	ribbon	domain
PhnA_Zn_Ribbon	PF08274.12	gi|288559714|ref|YP_003423200.1|	-	0.19	11.7	4.5	0.7	9.9	0.3	2.3	2	1	0	2	2	2	0	PhnA	Zinc-Ribbon
Nudix_N_2	PF14803.6	gi|288559714|ref|YP_003423200.1|	-	0.26	11.2	3.8	6.5	6.8	0.2	2.5	3	0	0	3	3	3	0	Nudix	N-terminal
UPF0547	PF10571.9	gi|288559714|ref|YP_003423200.1|	-	0.31	11.1	4.8	2.1	8.5	0.3	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
PHD_4	PF16866.5	gi|288559714|ref|YP_003423200.1|	-	0.6	10.2	5.9	0.52	10.4	1.1	2.1	1	1	1	2	2	2	0	PHD-finger
Rubredoxin_2	PF18073.1	gi|288559714|ref|YP_003423200.1|	-	0.92	9.3	6.3	6.3	6.6	0.9	2.3	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
PGM_PMM_I	PF02878.16	gi|288559715|ref|YP_003423201.1|	-	3.3e-47	159.7	0.1	5.2e-47	159.0	0.1	1.3	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_II	PF02879.16	gi|288559715|ref|YP_003423201.1|	-	1.3e-25	90.0	0.1	4.5e-25	88.2	0.0	2.0	2	0	0	2	2	2	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_III	PF02880.16	gi|288559715|ref|YP_003423201.1|	-	4.1e-22	78.5	0.2	1e-21	77.2	0.1	1.7	2	0	0	2	2	2	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_IV	PF00408.20	gi|288559715|ref|YP_003423201.1|	-	6.7e-14	51.8	0.1	1.7e-13	50.5	0.1	1.7	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
PhosphMutase	PF10143.9	gi|288559716|ref|YP_003423202.1|	-	3.5e-55	186.5	0.0	5e-55	186.0	0.0	1.2	1	0	0	1	1	1	1	2,3-bisphosphoglycerate-independent	phosphoglycerate	mutase
Metalloenzyme	PF01676.18	gi|288559716|ref|YP_003423202.1|	-	5.7e-48	163.4	0.2	6.5e-48	163.3	0.2	1.0	1	0	0	1	1	1	1	Metalloenzyme	superfamily
Phosphodiest	PF01663.22	gi|288559716|ref|YP_003423202.1|	-	0.0022	17.6	0.1	0.59	9.6	0.0	2.1	2	0	0	2	2	2	2	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
Alk_phosphatase	PF00245.20	gi|288559716|ref|YP_003423202.1|	-	0.0033	16.4	0.0	0.0053	15.8	0.0	1.3	1	0	0	1	1	1	1	Alkaline	phosphatase
Lambda_CIII	PF02061.16	gi|288559716|ref|YP_003423202.1|	-	0.23	11.6	0.6	0.54	10.4	0.2	1.8	2	0	0	2	2	2	0	Lambda	Phage	CIII
DUF92	PF01940.16	gi|288559717|ref|YP_003423203.1|	-	5.9e-52	176.4	14.4	1.2e-51	175.4	14.4	1.4	1	1	0	1	1	1	1	Integral	membrane	protein	DUF92
LMF1	PF06762.14	gi|288559717|ref|YP_003423203.1|	-	0.017	14.3	0.6	0.02	14.0	0.6	1.1	1	0	0	1	1	1	0	Lipase	maturation	factor
Ribosomal_S3Ae	PF01015.18	gi|288559718|ref|YP_003423204.1|	-	5.1e-64	215.6	5.9	6e-64	215.4	5.9	1.0	1	0	0	1	1	1	1	Ribosomal	S3Ae	family
GATase_4	PF13230.6	gi|288559719|ref|YP_003423205.1|	-	1.3e-30	106.3	0.0	2.8e-29	101.9	0.0	1.9	1	1	1	2	2	2	2	Glutamine	amidotransferases	class-II
GATase_6	PF13522.6	gi|288559719|ref|YP_003423205.1|	-	9.5e-08	32.3	0.0	1.6e-07	31.6	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
Maelstrom	PF13017.6	gi|288559719|ref|YP_003423205.1|	-	0.08	12.6	0.6	0.22	11.2	0.3	1.7	1	1	1	2	2	2	0	piRNA	pathway	germ-plasm	component
CAP_C	PF08603.11	gi|288559719|ref|YP_003423205.1|	-	0.11	12.1	0.0	0.2	11.2	0.0	1.4	1	0	0	1	1	1	0	Adenylate	cyclase	associated	(CAP)	C	terminal
GCS2	PF04107.13	gi|288559720|ref|YP_003423206.1|	-	0.096	12.0	0.0	0.15	11.4	0.0	1.3	1	0	0	1	1	1	0	Glutamate-cysteine	ligase	family	2(GCS2)
DUF433	PF04255.14	gi|288559721|ref|YP_003423207.1|	-	0.14	12.0	0.1	0.46	10.4	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF433)
Glu_cys_ligase	PF04262.14	gi|288559722|ref|YP_003423208.1|	-	1.2e-93	313.8	0.5	1e-74	251.4	0.0	2.1	1	1	1	2	2	2	2	Glutamate-cysteine	ligase
UPF0231	PF06062.11	gi|288559722|ref|YP_003423208.1|	-	0.026	14.8	0.5	0.15	12.3	0.2	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0231)
Nitro_FeMo-Co	PF02579.17	gi|288559723|ref|YP_003423209.1|	-	2.1e-16	60.0	0.2	2.4e-16	59.8	0.2	1.1	1	0	0	1	1	1	1	Dinitrogenase	iron-molybdenum	cofactor
AnfO_nitrog	PF09582.10	gi|288559723|ref|YP_003423209.1|	-	0.0063	15.9	0.2	0.0071	15.7	0.2	1.1	1	0	0	1	1	1	1	Iron	only	nitrogenase	protein	AnfO	(AnfO_nitrog)
Voltage_CLC	PF00654.20	gi|288559724|ref|YP_003423210.1|	-	1.8e-84	284.0	34.4	1.8e-84	284.0	34.4	2.0	1	1	1	2	2	2	2	Voltage	gated	chloride	channel
TrkA_C	PF02080.21	gi|288559724|ref|YP_003423210.1|	-	7.2e-11	41.8	0.0	1.8e-10	40.5	0.0	1.7	1	0	0	1	1	1	1	TrkA-C	domain
Pam17	PF08566.10	gi|288559724|ref|YP_003423210.1|	-	0.13	12.2	2.7	0.58	10.0	0.2	2.3	2	0	0	2	2	2	0	Mitochondrial	import	protein	Pam17
PDH	PF02153.17	gi|288559725|ref|YP_003423211.1|	-	8.5e-58	195.4	0.1	1.2e-57	194.9	0.1	1.2	1	0	0	1	1	1	1	Prephenate	dehydrogenase
NAD_binding_2	PF03446.15	gi|288559725|ref|YP_003423211.1|	-	3.3e-09	37.1	0.0	8.9e-09	35.7	0.0	1.7	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
F420_oxidored	PF03807.17	gi|288559725|ref|YP_003423211.1|	-	7e-08	33.0	0.3	2.5e-07	31.2	0.1	2.1	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
IlvN	PF07991.12	gi|288559725|ref|YP_003423211.1|	-	0.0001	21.9	0.0	0.0002	20.9	0.0	1.5	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
Semialdhyde_dh	PF01118.24	gi|288559725|ref|YP_003423211.1|	-	0.00019	21.8	0.5	0.0065	16.9	0.1	2.7	3	0	0	3	3	3	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.19	gi|288559725|ref|YP_003423211.1|	-	0.00025	20.5	0.2	0.001	18.4	0.0	2.1	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
DpaA_N	PF16924.5	gi|288559725|ref|YP_003423211.1|	-	0.0035	17.4	0.0	0.012	15.7	0.0	2.0	1	0	0	1	1	1	1	Dipicolinate	synthase	subunit	A	N-terminal	domain
ApbA	PF02558.16	gi|288559725|ref|YP_003423211.1|	-	0.0073	16.0	0.1	0.025	14.2	0.1	1.9	1	1	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
FDX-ACB	PF03147.14	gi|288559725|ref|YP_003423211.1|	-	0.012	16.0	0.1	0.03	14.7	0.1	1.7	1	0	0	1	1	1	0	Ferredoxin-fold	anticodon	binding	domain
NAD_Gly3P_dh_N	PF01210.23	gi|288559725|ref|YP_003423211.1|	-	0.023	14.7	0.2	0.065	13.2	0.1	1.8	1	1	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
AlaDh_PNT_C	PF01262.21	gi|288559725|ref|YP_003423211.1|	-	0.052	12.8	0.1	0.11	11.8	0.1	1.5	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
DUF3347	PF11827.8	gi|288559725|ref|YP_003423211.1|	-	0.053	13.7	0.3	0.1	12.8	0.3	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3347)
SF3b10	PF07189.11	gi|288559725|ref|YP_003423211.1|	-	0.13	12.4	0.1	0.37	10.9	0.1	1.8	1	0	0	1	1	1	0	Splicing	factor	3B	subunit	10	(SF3b10)
eRF1_1	PF03463.15	gi|288559726|ref|YP_003423212.1|	-	1.5e-29	102.6	0.1	2.6e-29	101.8	0.1	1.4	1	0	0	1	1	1	1	eRF1	domain	1
eRF1_3	PF03465.15	gi|288559726|ref|YP_003423212.1|	-	1.2e-21	77.3	2.6	1.8e-21	76.7	0.4	2.5	3	1	0	3	3	3	1	eRF1	domain	3
eRF1_2	PF03464.15	gi|288559726|ref|YP_003423212.1|	-	1.6e-18	67.3	0.1	3.1e-18	66.4	0.1	1.5	1	0	0	1	1	1	1	eRF1	domain	2
Nitroreductase	PF00881.24	gi|288559728|ref|YP_003423214.1|	-	1.4e-34	119.6	0.0	1.6e-34	119.5	0.0	1.0	1	0	0	1	1	1	1	Nitroreductase	family
TM1586_NiRdase	PF14512.6	gi|288559728|ref|YP_003423214.1|	-	3e-13	49.8	0.3	0.00022	20.9	0.0	3.0	1	1	2	3	3	3	3	Putative	TM	nitroreductase
SHS2_FTSA	PF02491.20	gi|288559728|ref|YP_003423214.1|	-	0.011	16.2	0.0	0.62	10.5	0.0	2.6	2	0	0	2	2	2	0	SHS2	domain	inserted	in	FTSA
Importin_rep_6	PF18829.1	gi|288559728|ref|YP_003423214.1|	-	0.022	14.9	0.4	0.87	9.7	0.0	2.2	2	0	0	2	2	2	0	Importin	repeat	6
Pyr_redox_2	PF07992.14	gi|288559729|ref|YP_003423215.1|	-	1.6e-49	168.7	0.1	2.1e-49	168.3	0.1	1.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|288559729|ref|YP_003423215.1|	-	3.4e-16	59.4	3.0	1.6e-15	57.1	3.0	1.8	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|288559729|ref|YP_003423215.1|	-	7.9e-11	42.4	0.4	7.9e-11	42.4	0.4	2.9	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.14	gi|288559729|ref|YP_003423215.1|	-	0.00011	21.1	0.4	0.00086	18.1	0.0	2.5	3	0	0	3	3	3	1	HI0933-like	protein
K_oxygenase	PF13434.6	gi|288559729|ref|YP_003423215.1|	-	0.00047	19.4	0.0	0.0011	18.3	0.0	1.4	1	1	0	1	1	1	1	L-lysine	6-monooxygenase	(NADPH-requiring)
GIDA	PF01134.22	gi|288559729|ref|YP_003423215.1|	-	0.0016	17.6	3.9	0.012	14.8	0.3	2.8	2	2	1	3	3	3	1	Glucose	inhibited	division	protein	A
Pyr_redox_dim	PF02852.22	gi|288559729|ref|YP_003423215.1|	-	0.0031	17.7	0.0	0.0074	16.5	0.0	1.6	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
FAD_binding_3	PF01494.19	gi|288559729|ref|YP_003423215.1|	-	0.0068	15.7	0.7	0.01	15.1	0.1	1.6	2	0	0	2	2	2	1	FAD	binding	domain
FAD_oxidored	PF12831.7	gi|288559729|ref|YP_003423215.1|	-	0.011	15.2	0.0	0.017	14.5	0.0	1.2	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.24	gi|288559729|ref|YP_003423215.1|	-	0.029	13.5	0.1	0.19	10.8	0.1	2.1	3	0	0	3	3	3	0	FAD	binding	domain
Nop16	PF09420.10	gi|288559729|ref|YP_003423215.1|	-	0.11	12.5	1.1	0.31	11.1	1.2	1.4	1	1	0	1	1	1	0	Ribosome	biogenesis	protein	Nop16
NAD_binding_8	PF13450.6	gi|288559729|ref|YP_003423215.1|	-	0.28	11.4	0.1	0.28	11.4	0.1	2.0	2	0	0	2	2	1	0	NAD(P)-binding	Rossmann-like	domain
HupF_HypC	PF01455.18	gi|288559730|ref|YP_003423216.1|	-	4.5e-24	84.4	0.9	1e-23	83.2	0.0	1.7	2	0	0	2	2	2	1	HupF/HypC	family
HD	PF01966.22	gi|288559731|ref|YP_003423217.1|	-	3.1e-18	66.1	0.1	4.4e-18	65.7	0.1	1.2	1	0	0	1	1	1	1	HD	domain
HDOD	PF08668.12	gi|288559731|ref|YP_003423217.1|	-	0.002	17.6	0.0	0.012	15.1	0.0	1.9	1	1	0	1	1	1	1	HDOD	domain
DUF5591	PF17884.1	gi|288559732|ref|YP_003423218.1|	-	3e-42	144.1	0.0	4.7e-42	143.5	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF5591)
TGT_C2	PF14810.6	gi|288559732|ref|YP_003423218.1|	-	3.3e-12	46.3	0.0	6.1e-12	45.5	0.0	1.5	1	0	0	1	1	1	1	Patch-forming	domain	C2	of	tRNA-guanine	transglycosylase
PUA	PF01472.20	gi|288559732|ref|YP_003423218.1|	-	1.3e-10	41.1	1.0	2.9e-10	39.9	0.6	1.7	2	0	0	2	2	2	1	PUA	domain
FeS_assembly_P	PF01883.19	gi|288559733|ref|YP_003423219.1|	-	8.7e-18	64.3	1.7	1.1e-17	64.0	1.7	1.1	1	0	0	1	1	1	1	Iron-sulfur	cluster	assembly	protein
THDPS_M	PF14789.6	gi|288559733|ref|YP_003423219.1|	-	0.084	13.0	0.0	0.15	12.2	0.0	1.5	1	0	0	1	1	1	0	Tetrahydrodipicolinate	N-succinyltransferase	middle
ACT	PF01842.25	gi|288559734|ref|YP_003423220.1|	-	0.0016	18.2	0.0	0.0035	17.1	0.0	1.6	1	0	0	1	1	1	1	ACT	domain
TFIIE_alpha	PF02002.17	gi|288559735|ref|YP_003423221.1|	-	4.2e-19	68.4	12.0	4.9e-18	64.9	4.0	3.5	2	1	1	3	3	3	1	TFIIE	alpha	subunit
TF_Zn_Ribbon	PF08271.12	gi|288559735|ref|YP_003423221.1|	-	8.5e-07	28.4	0.6	8.5e-07	28.4	0.6	2.2	2	0	0	2	2	2	1	TFIIB	zinc-binding
HTH_9	PF08221.11	gi|288559735|ref|YP_003423221.1|	-	0.00044	20.3	0.0	0.23	11.6	0.0	3.3	3	0	0	3	3	3	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
TrmB	PF01978.19	gi|288559735|ref|YP_003423221.1|	-	0.0075	16.1	0.0	2.9	7.8	0.0	3.3	2	1	1	3	3	3	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_23	PF13384.6	gi|288559735|ref|YP_003423221.1|	-	0.015	15.1	0.0	19	5.2	0.0	3.2	3	0	0	3	3	3	0	Homeodomain-like	domain
Rrf2	PF02082.20	gi|288559735|ref|YP_003423221.1|	-	0.045	14.1	0.0	18	5.7	0.0	2.7	3	0	0	3	3	3	0	Transcriptional	regulator
zf-ribbon_3	PF13248.6	gi|288559735|ref|YP_003423221.1|	-	0.081	12.4	0.4	0.19	11.2	0.0	1.9	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF1610	PF07754.11	gi|288559735|ref|YP_003423221.1|	-	0.088	12.8	0.2	0.088	12.8	0.2	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
zf-Mss51	PF13824.6	gi|288559735|ref|YP_003423221.1|	-	0.14	12.3	0.5	2.3	8.4	0.1	2.9	2	0	0	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
CDC45	PF02724.14	gi|288559735|ref|YP_003423221.1|	-	0.23	9.7	8.5	0.25	9.6	8.5	1.1	1	0	0	1	1	1	0	CDC45-like	protein
Ant_C	PF05586.11	gi|288559735|ref|YP_003423221.1|	-	2.3	8.9	4.9	0.87	10.2	1.0	2.2	2	0	0	2	2	2	0	Anthrax	receptor	C-terminus	region
F420_ligase	PF01996.16	gi|288559736|ref|YP_003423222.1|	-	1.3e-26	93.5	0.0	1.6e-26	93.1	0.0	1.1	1	0	0	1	1	1	1	F420-0:Gamma-glutamyl	ligase
PK_C	PF02887.16	gi|288559737|ref|YP_003423223.1|	-	3e-14	53.2	0.4	4.1e-14	52.8	0.4	1.2	1	0	0	1	1	1	1	Pyruvate	kinase,	alpha/beta	domain
HMGL-like	PF00682.19	gi|288559737|ref|YP_003423223.1|	-	0.012	15.1	0.2	0.14	11.7	0.0	2.0	1	1	0	2	2	2	0	HMGL-like
Tubulin	PF00091.25	gi|288559738|ref|YP_003423224.1|	-	1.1e-43	149.7	0.4	2.7e-43	148.5	0.4	1.7	1	0	0	1	1	1	1	Tubulin/FtsZ	family,	GTPase	domain
FtsZ_C	PF12327.8	gi|288559738|ref|YP_003423224.1|	-	3.3e-36	123.4	5.4	6.8e-36	122.5	1.6	2.7	2	1	1	3	3	3	1	FtsZ	family,	C-terminal	domain
NAD_binding_10	PF13460.6	gi|288559738|ref|YP_003423224.1|	-	0.053	13.4	0.4	0.17	11.7	0.1	1.9	2	0	0	2	2	2	0	NAD(P)H-binding
ThiF	PF00899.21	gi|288559738|ref|YP_003423224.1|	-	0.092	12.1	0.0	0.2	11.0	0.0	1.5	1	0	0	1	1	1	0	ThiF	family
Tubulin_2	PF13809.6	gi|288559738|ref|YP_003423224.1|	-	0.14	11.3	0.1	0.14	11.3	0.1	2.2	2	0	0	2	2	2	0	Tubulin	like
SecE	PF00584.20	gi|288559739|ref|YP_003423225.1|	-	2.6e-09	36.8	0.4	2.8e-09	36.7	0.4	1.1	1	0	0	1	1	1	1	SecE/Sec61-gamma	subunits	of	protein	translocation	complex
Spt5-NGN	PF03439.13	gi|288559740|ref|YP_003423226.1|	-	4.2e-17	61.8	0.0	8.8e-17	60.8	0.0	1.6	1	0	0	1	1	1	1	Early	transcription	elongation	factor	of	RNA	pol	II,	NGN	section
KOW	PF00467.29	gi|288559740|ref|YP_003423226.1|	-	0.00012	21.8	0.1	0.00025	20.9	0.1	1.5	1	0	0	1	1	1	1	KOW	motif
DUF627	PF04781.12	gi|288559740|ref|YP_003423226.1|	-	0.1	12.6	0.0	0.17	11.9	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF627)
Ribosomal_L11_N	PF03946.14	gi|288559741|ref|YP_003423227.1|	-	4.6e-24	84.0	1.6	1.7e-22	79.0	0.3	2.4	2	1	0	2	2	2	2	Ribosomal	protein	L11,	N-terminal	domain
Ribosomal_L11	PF00298.19	gi|288559741|ref|YP_003423227.1|	-	4.1e-20	72.1	0.1	6.3e-20	71.4	0.1	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L11,	RNA	binding	domain
Ribosomal_L1	PF00687.21	gi|288559742|ref|YP_003423228.1|	-	3.1e-44	151.2	0.7	3.7e-44	150.9	0.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L1p/L10e	family
PTS_IIB	PF02302.17	gi|288559742|ref|YP_003423228.1|	-	0.91	10.3	6.0	4.6	8.0	0.6	2.7	2	1	1	3	3	3	0	PTS	system,	Lactose/Cellobiose	specific	IIB	subunit
Ribosomal_L10	PF00466.20	gi|288559743|ref|YP_003423229.1|	-	9.5e-21	73.8	0.6	2.3e-20	72.6	0.1	1.9	2	0	0	2	2	2	1	Ribosomal	protein	L10
RL10P_insert	PF17777.1	gi|288559743|ref|YP_003423229.1|	-	7.2e-20	70.8	0.1	1.6e-19	69.6	0.1	1.6	1	0	0	1	1	1	1	Insertion	domain	in	60S	ribosomal	protein	L10P
Ribosomal_60s	PF00428.19	gi|288559743|ref|YP_003423229.1|	-	3.2e-07	30.8	12.3	3.2e-07	30.8	12.3	2.3	3	0	0	3	3	3	1	60s	Acidic	ribosomal	protein
DUF1687	PF07955.11	gi|288559743|ref|YP_003423229.1|	-	0.065	13.7	0.1	0.16	12.4	0.1	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1687)
Ribosomal_60s	PF00428.19	gi|288559744|ref|YP_003423230.1|	-	1.7e-14	54.1	27.2	2.6e-14	53.6	27.2	1.3	1	1	0	1	1	1	1	60s	Acidic	ribosomal	protein
EF-hand_14	PF17959.1	gi|288559744|ref|YP_003423230.1|	-	0.0079	16.5	0.2	0.013	15.9	0.2	1.5	1	1	0	1	1	1	1	EF-hand	domain
DUF740	PF05340.12	gi|288559744|ref|YP_003423230.1|	-	0.063	12.0	0.7	0.069	11.9	0.7	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF740)
DUF969	PF06149.12	gi|288559744|ref|YP_003423230.1|	-	0.072	12.5	2.0	0.15	11.4	0.8	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF969)
Chordopox_A30L	PF06015.12	gi|288559744|ref|YP_003423230.1|	-	0.072	12.9	0.6	0.072	12.9	0.6	1.5	2	0	0	2	2	2	0	Chordopoxvirus	A30L	protein
PepSY_2	PF13670.6	gi|288559744|ref|YP_003423230.1|	-	0.13	12.3	10.4	3.4	7.7	0.0	2.1	2	0	0	2	2	2	0	Peptidase	propeptide	and	YPEB	domain
Paf1	PF03985.13	gi|288559744|ref|YP_003423230.1|	-	0.34	9.8	5.5	0.36	9.8	5.5	1.1	1	0	0	1	1	1	0	Paf1
DUF4611	PF15387.6	gi|288559744|ref|YP_003423230.1|	-	0.38	11.0	5.7	0.55	10.5	5.7	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4611)
CDC45	PF02724.14	gi|288559744|ref|YP_003423230.1|	-	0.48	8.7	4.4	0.52	8.6	4.4	1.0	1	0	0	1	1	1	0	CDC45-like	protein
DUF4746	PF15928.5	gi|288559744|ref|YP_003423230.1|	-	0.88	8.9	7.1	0.95	8.8	7.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4746)
zinc_ribbon_2	PF13240.6	gi|288559745|ref|YP_003423231.1|	-	1.3e-09	37.5	3.3	2.7e-09	36.4	3.3	1.6	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|288559745|ref|YP_003423231.1|	-	5.2e-08	32.8	1.0	8.4e-08	32.1	1.0	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-ribbon_3	PF13248.6	gi|288559745|ref|YP_003423231.1|	-	1.6e-05	24.2	3.2	3.4e-05	23.1	3.2	1.6	1	0	0	1	1	1	1	zinc-ribbon	domain
UPF0547	PF10571.9	gi|288559745|ref|YP_003423231.1|	-	0.01	15.9	2.2	0.022	14.9	2.2	1.6	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
zf-tcix	PF14952.6	gi|288559745|ref|YP_003423231.1|	-	0.011	15.4	2.1	0.025	14.2	2.1	1.6	1	0	0	1	1	1	0	Putative	treble-clef,	zinc-finger,	Zn-binding
Nudix_N_2	PF14803.6	gi|288559745|ref|YP_003423231.1|	-	0.017	15.1	1.4	0.26	11.2	0.1	2.3	2	0	0	2	2	2	0	Nudix	N-terminal
EVI2A	PF05399.11	gi|288559745|ref|YP_003423231.1|	-	0.053	13.1	0.6	0.053	13.1	0.6	2.0	1	1	1	2	2	2	0	Ectropic	viral	integration	site	2A	protein	(EVI2A)
zf-Sec23_Sec24	PF04810.15	gi|288559745|ref|YP_003423231.1|	-	0.081	13.0	0.5	0.85	9.7	0.0	2.3	2	0	0	2	2	2	0	Sec23/Sec24	zinc	finger
TMEM154	PF15102.6	gi|288559745|ref|YP_003423231.1|	-	0.13	12.2	1.2	0.29	11.0	0.0	1.8	1	1	1	2	2	2	0	TMEM154	protein	family
GFA	PF04828.14	gi|288559745|ref|YP_003423231.1|	-	0.14	12.5	1.1	0.35	11.2	0.3	2.0	1	1	1	2	2	2	0	Glutathione-dependent	formaldehyde-activating	enzyme
DHHC	PF01529.20	gi|288559745|ref|YP_003423231.1|	-	0.16	12.1	0.2	2.6	8.2	0.4	2.1	2	0	0	2	2	2	0	DHHC	palmitoyltransferase
zinc_ribbon_15	PF17032.5	gi|288559745|ref|YP_003423231.1|	-	0.19	12.5	3.4	0.36	11.6	3.4	1.5	1	0	0	1	1	1	0	zinc-ribbon	family
tRNA-synt_1g	PF09334.11	gi|288559745|ref|YP_003423231.1|	-	0.31	9.7	0.8	0.41	9.3	0.8	1.1	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(M)
TF_Zn_Ribbon	PF08271.12	gi|288559745|ref|YP_003423231.1|	-	0.44	10.1	2.5	1.6	8.4	2.5	1.9	1	1	0	1	1	1	0	TFIIB	zinc-binding
A2L_zn_ribbon	PF08792.10	gi|288559745|ref|YP_003423231.1|	-	1.1	9.0	5.3	5.5	6.8	0.5	2.6	1	1	1	2	2	2	0	A2L	zinc	ribbon	domain
CarboxypepD_reg	PF13620.6	gi|288559746|ref|YP_003423232.1|	-	0.012	15.9	1.7	0.017	15.4	0.2	2.1	2	1	1	3	3	3	0	Carboxypeptidase	regulatory-like	domain
Big_3_5	PF16640.5	gi|288559746|ref|YP_003423232.1|	-	0.013	15.7	0.1	0.013	15.7	0.1	1.7	2	0	0	2	2	2	0	Bacterial	Ig-like	domain	(group	3)
DUF5013	PF16405.5	gi|288559746|ref|YP_003423232.1|	-	0.029	14.6	2.7	0.048	13.9	2.6	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF5013)
MG4	PF17789.1	gi|288559746|ref|YP_003423232.1|	-	0.036	14.2	0.8	0.094	12.9	0.8	1.8	1	1	0	1	1	1	0	Macroglobulin	domain	MG4
DUF4198	PF10670.9	gi|288559746|ref|YP_003423232.1|	-	0.047	14.1	0.5	0.13	12.7	0.0	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4198)
Big_1	PF02369.16	gi|288559746|ref|YP_003423232.1|	-	0.066	13.2	0.1	0.066	13.2	0.1	2.3	3	0	0	3	3	3	0	Bacterial	Ig-like	domain	(group	1)
GbpA_2	PF18416.1	gi|288559746|ref|YP_003423232.1|	-	0.067	13.5	0.7	0.75	10.1	0.0	2.4	2	1	0	2	2	2	0	N-acetylglucosamine	binding	protein	domain	2
Baculo_11_kDa	PF06143.11	gi|288559746|ref|YP_003423232.1|	-	0.14	11.8	0.6	0.29	10.7	0.6	1.5	1	0	0	1	1	1	0	Baculovirus	11	kDa	family
YtkA	PF13115.6	gi|288559746|ref|YP_003423232.1|	-	0.15	12.7	1.7	0.18	12.4	0.1	2.0	2	1	0	2	2	2	0	YtkA-like
TMEMspv1-c74-12	PF11044.8	gi|288559746|ref|YP_003423232.1|	-	0.21	11.6	0.8	0.55	10.3	0.8	1.6	1	0	0	1	1	1	0	Plectrovirus	spv1-c74	ORF	12	transmembrane	protein
TBPIP	PF07106.13	gi|288559746|ref|YP_003423232.1|	-	0.22	11.5	1.4	0.25	11.3	0.1	1.7	2	0	0	2	2	2	0	TBPIP/Hop2	winged	helix	domain
FixH	PF05751.11	gi|288559746|ref|YP_003423232.1|	-	0.69	9.9	0.0	0.69	9.9	0.0	2.3	1	1	1	2	2	2	0	FixH
zinc_ribbon_2	PF13240.6	gi|288559747|ref|YP_003423233.1|	-	3.3e-05	23.4	11.0	4.6e-05	23.0	11.0	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|288559747|ref|YP_003423233.1|	-	5.8e-05	23.0	1.9	7.4e-05	22.7	1.9	1.1	1	0	0	1	1	1	1	Double	zinc	ribbon
RNA_POL_M_15KD	PF02150.16	gi|288559747|ref|YP_003423233.1|	-	0.019	14.8	0.3	0.019	14.8	0.3	2.0	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
DUF3262	PF11660.8	gi|288559747|ref|YP_003423233.1|	-	0.046	14.1	3.5	0.67	10.4	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3262)
CPP1-like	PF11833.8	gi|288559747|ref|YP_003423233.1|	-	0.13	11.9	0.1	0.16	11.6	0.1	1.0	1	0	0	1	1	1	0	Protein	CHAPERONE-LIKE	PROTEIN	OF	POR1-like
zf-ribbon_3	PF13248.6	gi|288559747|ref|YP_003423233.1|	-	0.97	8.9	8.7	1.4	8.4	8.7	1.3	1	0	0	1	1	1	0	zinc-ribbon	domain
Abhydrolase_5	PF12695.7	gi|288559748|ref|YP_003423234.1|	-	7.7e-55	185.1	1.3	1e-54	184.8	1.3	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.20	gi|288559748|ref|YP_003423234.1|	-	3.7e-06	26.8	0.1	8.3e-06	25.6	0.1	1.5	1	1	0	1	1	1	1	alpha/beta	hydrolase	fold
Hydrolase_4	PF12146.8	gi|288559748|ref|YP_003423234.1|	-	8.3e-06	25.2	0.1	3.4e-05	23.2	0.1	1.9	1	1	1	2	2	2	1	Serine	aminopeptidase,	S33
Abhydrolase_6	PF12697.7	gi|288559748|ref|YP_003423234.1|	-	0.0062	17.2	0.0	0.012	16.3	0.0	1.5	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
LIDHydrolase	PF10230.9	gi|288559748|ref|YP_003423234.1|	-	0.022	14.3	0.2	0.53	9.8	0.1	2.1	1	1	1	2	2	2	0	Lipid-droplet	associated	hydrolase
DUF2974	PF11187.8	gi|288559748|ref|YP_003423234.1|	-	0.023	14.3	1.2	0.067	12.7	0.2	2.2	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2974)
Ser_hydrolase	PF06821.13	gi|288559748|ref|YP_003423234.1|	-	0.092	12.6	0.0	0.13	12.1	0.0	1.2	1	0	0	1	1	1	0	Serine	hydrolase
Lipase_3	PF01764.25	gi|288559748|ref|YP_003423234.1|	-	0.2	11.5	0.8	0.61	9.9	0.6	1.9	2	1	1	3	3	3	0	Lipase	(class	3)
tRNA-synt_2c	PF01411.19	gi|288559749|ref|YP_003423235.1|	-	1.1e-125	420.2	0.1	1.6e-125	419.7	0.1	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(A)
DHHA1	PF02272.19	gi|288559749|ref|YP_003423235.1|	-	1.5e-23	83.8	3.8	4.4e-23	82.2	3.8	1.9	1	0	0	1	1	1	1	DHHA1	domain
tRNA_SAD	PF07973.14	gi|288559749|ref|YP_003423235.1|	-	6.1e-13	48.6	0.3	5.7e-12	45.5	0.4	2.5	2	0	0	2	2	2	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
tRNA-synt_2e	PF02091.15	gi|288559749|ref|YP_003423235.1|	-	7.9e-05	22.0	0.0	0.00015	21.1	0.0	1.5	1	0	0	1	1	1	1	Glycyl-tRNA	synthetase	alpha	subunit
TMPIT	PF07851.13	gi|288559749|ref|YP_003423235.1|	-	1	8.5	2.8	0.81	8.9	0.4	1.8	2	0	0	2	2	2	0	TMPIT-like	protein
RNA_pol_A_CTD	PF03118.15	gi|288559749|ref|YP_003423235.1|	-	1.4	8.8	6.9	0.09	12.6	0.9	2.1	2	0	0	2	2	2	0	Bacterial	RNA	polymerase,	alpha	chain	C	terminal	domain
PLC-beta_C	PF08703.10	gi|288559749|ref|YP_003423235.1|	-	3.4	7.6	8.4	0.2	11.6	0.6	2.2	2	0	0	2	2	2	0	PLC-beta	C	terminal
Big_3_5	PF16640.5	gi|288559750|ref|YP_003423236.1|	-	3.1e-19	68.9	33.1	1.1e-07	31.9	2.9	4.7	4	0	0	4	4	4	4	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|288559750|ref|YP_003423236.1|	-	4.3e-18	65.1	23.3	7.4e-06	25.9	1.4	4.8	4	0	0	4	4	4	4	Bacterial	Ig-like	domain	(group	1)
CarboxypepD_reg	PF13620.6	gi|288559750|ref|YP_003423236.1|	-	3.1e-15	56.2	10.6	0.00059	20.1	0.4	4.6	4	0	0	4	4	4	3	Carboxypeptidase	regulatory-like	domain
MG4	PF17789.1	gi|288559750|ref|YP_003423236.1|	-	1e-14	54.4	13.6	0.0035	17.5	0.5	4.6	4	0	0	4	4	4	4	Macroglobulin	domain	MG4
Invasin_D3	PF09134.10	gi|288559750|ref|YP_003423236.1|	-	4.1e-12	46.3	28.3	0.00023	21.4	1.8	4.7	2	2	2	4	4	4	4	Invasin,	domain	3
bMG3	PF11974.8	gi|288559750|ref|YP_003423236.1|	-	3.5e-06	27.0	3.8	0.16	12.0	0.1	4.4	4	1	0	4	4	4	2	Bacterial	alpha-2-macroglobulin	MG3	domain
DUF4198	PF10670.9	gi|288559750|ref|YP_003423236.1|	-	0.00017	22.0	4.9	2.1	8.6	0.2	3.8	3	1	0	3	3	3	2	Domain	of	unknown	function	(DUF4198)
PMBR	PF09373.10	gi|288559750|ref|YP_003423236.1|	-	0.0074	16.4	0.5	0.0074	16.4	0.5	4.6	5	0	0	5	5	5	1	Pseudomurein-binding	repeat
ANAPC10	PF03256.16	gi|288559750|ref|YP_003423236.1|	-	0.016	14.8	0.1	0.17	11.5	0.1	2.4	2	0	0	2	2	2	0	Anaphase-promoting	complex,	subunit	10	(APC10)
CarbopepD_reg_2	PF13715.6	gi|288559750|ref|YP_003423236.1|	-	0.14	12.2	28.1	1.2	9.1	0.6	4.9	5	0	0	5	5	5	0	CarboxypepD_reg-like	domain
CHRD	PF07452.12	gi|288559750|ref|YP_003423236.1|	-	0.24	12.3	4.0	9.5	7.2	0.1	4.0	2	2	2	4	4	4	0	CHRD	domain
SDA1	PF05285.12	gi|288559750|ref|YP_003423236.1|	-	8.5	5.7	8.3	16	4.8	8.3	1.4	1	0	0	1	1	1	0	SDA1
ThiI	PF02568.14	gi|288559751|ref|YP_003423237.1|	-	9.9e-68	227.6	0.0	1.8e-67	226.8	0.0	1.4	1	0	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
THUMP	PF02926.17	gi|288559751|ref|YP_003423237.1|	-	2.2e-22	79.7	0.2	4.2e-22	78.8	0.2	1.5	1	0	0	1	1	1	1	THUMP	domain
QueC	PF06508.13	gi|288559751|ref|YP_003423237.1|	-	0.00054	19.5	0.1	0.16	11.4	0.1	2.7	1	1	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
tRNA_Me_trans	PF03054.16	gi|288559751|ref|YP_003423237.1|	-	0.0012	17.7	0.0	0.0044	15.8	0.0	1.8	2	0	0	2	2	2	1	tRNA	methyl	transferase
HMG_CoA_synt_C	PF08540.10	gi|288559751|ref|YP_003423237.1|	-	0.025	14.2	0.0	0.043	13.4	0.0	1.3	1	0	0	1	1	1	0	Hydroxymethylglutaryl-coenzyme	A	synthase	C	terminal
NAD_synthase	PF02540.17	gi|288559751|ref|YP_003423237.1|	-	0.049	12.8	0.0	0.09	11.9	0.0	1.4	1	0	0	1	1	1	0	NAD	synthase
DUF998	PF06197.13	gi|288559752|ref|YP_003423238.1|	-	5.6e-08	32.6	10.4	6.9e-08	32.3	10.4	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF998)
DUF1211	PF06736.11	gi|288559753|ref|YP_003423239.1|	-	3.2e-19	69.1	7.2	3.2e-19	69.1	7.2	2.0	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1211)
DUF1211	PF06736.11	gi|288559754|ref|YP_003423240.1|	-	2.2e-12	47.2	3.0	2.2e-12	47.2	3.0	2.6	2	1	1	3	3	3	1	Protein	of	unknown	function	(DUF1211)
SpoIIIAC	PF06686.11	gi|288559754|ref|YP_003423240.1|	-	0.17	12.1	0.3	0.17	12.1	0.3	3.0	4	0	0	4	4	4	0	Stage	III	sporulation	protein	AC/AD	protein	family
DUF2070	PF09843.9	gi|288559754|ref|YP_003423240.1|	-	0.92	7.7	16.0	1	7.5	16.0	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
FBPase_3	PF01950.16	gi|288559755|ref|YP_003423241.1|	-	1e-184	613.8	0.0	1.2e-184	613.6	0.0	1.0	1	0	0	1	1	1	1	Fructose-1,6-bisphosphatase
zinc_ribbon_2	PF13240.6	gi|288559756|ref|YP_003423242.1|	-	6.6e-06	25.7	7.2	1.1e-05	24.9	7.2	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|288559756|ref|YP_003423242.1|	-	8.5e-05	22.5	1.0	0.00012	22.1	1.0	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-ribbon_3	PF13248.6	gi|288559756|ref|YP_003423242.1|	-	0.0009	18.6	3.3	0.0019	17.6	3.3	1.5	1	0	0	1	1	1	1	zinc-ribbon	domain
TMEM156	PF15106.6	gi|288559756|ref|YP_003423242.1|	-	0.0061	16.0	0.0	0.0081	15.6	0.0	1.3	1	0	0	1	1	1	1	TMEM156	protein	family
Rubredoxin	PF00301.20	gi|288559756|ref|YP_003423242.1|	-	0.015	15.3	1.6	3.7	7.6	0.1	2.2	2	0	0	2	2	2	0	Rubredoxin
zf-ZPR1	PF03367.13	gi|288559756|ref|YP_003423242.1|	-	0.018	14.9	1.3	0.073	12.9	1.3	1.9	1	1	0	1	1	1	0	ZPR1	zinc-finger	domain
UPF0547	PF10571.9	gi|288559756|ref|YP_003423242.1|	-	0.038	14.1	7.0	0.13	12.4	7.2	1.8	1	1	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
Ribosomal_L32p	PF01783.23	gi|288559756|ref|YP_003423242.1|	-	0.11	12.7	2.6	0.18	12.1	2.6	1.3	1	0	0	1	1	1	0	Ribosomal	L32p	protein	family
PriA_CRR	PF18319.1	gi|288559756|ref|YP_003423242.1|	-	0.63	10.1	10.4	0.37	10.8	4.2	2.2	2	0	0	2	2	2	0	PriA	DNA	helicase	Cys-rich	region	(CRR)	domain
zinc_ribbon_15	PF17032.5	gi|288559756|ref|YP_003423242.1|	-	0.7	10.7	5.8	0.83	10.4	3.6	2.1	2	0	0	2	2	2	0	zinc-ribbon	family
DHHC	PF01529.20	gi|288559756|ref|YP_003423242.1|	-	0.83	9.8	11.0	0.85	9.7	2.0	2.3	2	1	0	2	2	2	0	DHHC	palmitoyltransferase
Jiraiya	PF15038.6	gi|288559756|ref|YP_003423242.1|	-	1.1	8.6	5.0	1.6	8.2	5.0	1.1	1	0	0	1	1	1	0	Jiraiya
TF_Zn_Ribbon	PF08271.12	gi|288559756|ref|YP_003423242.1|	-	1.2	8.8	4.3	2.3	7.8	4.3	1.4	1	0	0	1	1	1	0	TFIIB	zinc-binding
NOB1_Zn_bind	PF08772.11	gi|288559756|ref|YP_003423242.1|	-	1.3	9.3	8.4	1.1	9.5	0.8	2.5	1	1	1	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
RNA_POL_M_15KD	PF02150.16	gi|288559756|ref|YP_003423242.1|	-	2.8	7.9	7.1	20	5.2	7.1	2.1	1	1	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
Ninjurin	PF04923.12	gi|288559756|ref|YP_003423242.1|	-	7	6.7	7.5	12	5.9	4.3	2.1	1	1	1	2	2	2	0	Ninjurin
Acetyltransf_3	PF13302.7	gi|288559757|ref|YP_003423243.1|	-	1.4e-30	106.8	0.0	1.6e-30	106.5	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.25	gi|288559757|ref|YP_003423243.1|	-	1.1e-11	44.9	0.1	1.5e-11	44.6	0.1	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_4	PF13420.7	gi|288559757|ref|YP_003423243.1|	-	1.3e-06	28.6	0.2	1.5e-06	28.4	0.2	1.0	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.6	gi|288559757|ref|YP_003423243.1|	-	5.7e-05	22.8	0.0	7.4e-05	22.5	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
GNAT_acetyltran	PF12746.7	gi|288559757|ref|YP_003423243.1|	-	0.0032	17.1	0.1	0.0039	16.8	0.1	1.2	1	0	0	1	1	1	1	GNAT	acetyltransferase
FR47	PF08445.10	gi|288559757|ref|YP_003423243.1|	-	0.11	12.5	0.0	0.22	11.5	0.0	1.5	1	0	0	1	1	1	0	FR47-like	protein
DUF357	PF04010.13	gi|288559759|ref|YP_003423245.1|	-	9.9e-17	60.8	0.2	1.2e-16	60.5	0.2	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF357)
CDP-OH_P_transf	PF01066.21	gi|288559760|ref|YP_003423246.1|	-	4.9e-12	46.4	1.4	4.9e-12	46.4	1.4	2.6	2	1	0	2	2	2	1	CDP-alcohol	phosphatidyltransferase
EI24	PF07264.11	gi|288559760|ref|YP_003423246.1|	-	0.17	12.1	6.8	0.34	11.1	6.8	1.5	1	1	0	1	1	1	0	Etoposide-induced	protein	2.4	(EI24)
PspC	PF04024.12	gi|288559760|ref|YP_003423246.1|	-	0.24	11.2	6.9	1.8	8.4	0.4	2.7	2	0	0	2	2	2	0	PspC	domain
DUF2976	PF11190.8	gi|288559760|ref|YP_003423246.1|	-	0.75	9.6	10.5	1.5	8.7	1.3	3.3	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF2976)
DsbB	PF02600.16	gi|288559760|ref|YP_003423246.1|	-	1.7	9.1	7.9	0.19	12.1	1.8	2.3	2	1	1	3	3	3	0	Disulfide	bond	formation	protein	DsbB
Sua5_yciO_yrdC	PF01300.18	gi|288559761|ref|YP_003423247.1|	-	5.2e-50	169.4	0.0	6e-50	169.2	0.0	1.0	1	0	0	1	1	1	1	Telomere	recombination
Cyclophil_like2	PF18050.1	gi|288559761|ref|YP_003423247.1|	-	0.0029	17.6	0.0	0.13	12.3	0.0	2.3	2	0	0	2	2	2	2	Cyclophilin-like	family
Rad51	PF08423.11	gi|288559762|ref|YP_003423248.1|	-	5.1e-31	107.9	0.2	5.7e-31	107.7	0.2	1.1	1	0	0	1	1	1	1	Rad51
ATPase	PF06745.13	gi|288559762|ref|YP_003423248.1|	-	5.6e-15	55.3	0.9	6.6e-15	55.1	0.9	1.1	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.6	gi|288559762|ref|YP_003423248.1|	-	4.4e-14	52.5	0.0	6.8e-14	51.9	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
RecA	PF00154.21	gi|288559762|ref|YP_003423248.1|	-	2.7e-11	43.5	0.4	3.6e-11	43.0	0.4	1.3	1	1	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
AAA_24	PF13479.6	gi|288559762|ref|YP_003423248.1|	-	1.4e-08	34.7	0.0	2.2e-08	34.1	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
Zot	PF05707.12	gi|288559762|ref|YP_003423248.1|	-	1.5e-07	31.2	0.0	1.7e-07	31.1	0.0	1.2	1	0	0	1	1	1	1	Zonular	occludens	toxin	(Zot)
AAA_31	PF13614.6	gi|288559762|ref|YP_003423248.1|	-	1.1e-06	28.7	0.1	1.5e-06	28.2	0.1	1.2	1	0	0	1	1	1	1	AAA	domain
ATPase_2	PF01637.18	gi|288559762|ref|YP_003423248.1|	-	1.6e-06	28.3	0.1	2.3e-06	27.7	0.1	1.3	1	0	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
CbiA	PF01656.23	gi|288559762|ref|YP_003423248.1|	-	7.1e-06	26.1	0.0	1.2e-05	25.4	0.0	1.3	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
DnaB_C	PF03796.15	gi|288559762|ref|YP_003423248.1|	-	1.2e-05	24.8	0.3	0.0032	16.9	0.3	2.2	1	1	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
IstB_IS21	PF01695.17	gi|288559762|ref|YP_003423248.1|	-	8.9e-05	22.3	0.1	0.00027	20.7	0.0	1.8	2	1	0	2	2	2	1	IstB-like	ATP	binding	protein
ParA	PF10609.9	gi|288559762|ref|YP_003423248.1|	-	0.00023	20.7	0.0	0.0019	17.7	0.0	1.9	2	0	0	2	2	2	1	NUBPL	iron-transfer	P-loop	NTPase
AAA	PF00004.29	gi|288559762|ref|YP_003423248.1|	-	0.00041	20.8	0.0	0.00061	20.2	0.0	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
ArsA_ATPase	PF02374.15	gi|288559762|ref|YP_003423248.1|	-	0.00062	19.0	0.2	0.0016	17.7	0.1	1.6	1	1	1	2	2	2	1	Anion-transporting	ATPase
AAA_18	PF13238.6	gi|288559762|ref|YP_003423248.1|	-	0.0013	19.3	0.0	0.0028	18.2	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|288559762|ref|YP_003423248.1|	-	0.002	18.4	0.0	0.0043	17.3	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
Fer4_NifH	PF00142.18	gi|288559762|ref|YP_003423248.1|	-	0.02	14.4	0.1	0.04	13.4	0.1	1.4	1	0	0	1	1	1	0	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
PhoH	PF02562.16	gi|288559762|ref|YP_003423248.1|	-	0.036	13.5	0.0	0.057	12.9	0.0	1.3	1	0	0	1	1	1	0	PhoH-like	protein
AAA_11	PF13086.6	gi|288559762|ref|YP_003423248.1|	-	0.054	13.3	0.0	0.076	12.8	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
TrwB_AAD_bind	PF10412.9	gi|288559762|ref|YP_003423248.1|	-	0.059	12.3	0.0	0.1	11.5	0.0	1.4	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
Thioredoxin_11	PF18078.1	gi|288559762|ref|YP_003423248.1|	-	0.073	13.2	0.2	0.12	12.4	0.2	1.6	1	1	0	1	1	1	0	Thioredoxin-like	SNTX	domain
RNA_helicase	PF00910.22	gi|288559762|ref|YP_003423248.1|	-	0.15	12.4	0.0	0.34	11.3	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
Aminotran_1_2	PF00155.21	gi|288559763|ref|YP_003423249.1|	-	2.1e-40	139.0	0.0	2.4e-40	138.8	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Alliinase_C	PF04864.13	gi|288559763|ref|YP_003423249.1|	-	2.9e-05	23.1	0.0	0.00018	20.5	0.0	2.0	2	0	0	2	2	2	1	Allinase
DegT_DnrJ_EryC1	PF01041.17	gi|288559763|ref|YP_003423249.1|	-	3.1e-05	23.4	0.0	0.00043	19.7	0.0	2.0	1	1	1	2	2	2	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_5	PF00266.19	gi|288559763|ref|YP_003423249.1|	-	3.6e-05	22.9	0.0	0.0088	15.0	0.0	2.1	2	0	0	2	2	2	2	Aminotransferase	class-V
Beta_elim_lyase	PF01212.21	gi|288559763|ref|YP_003423249.1|	-	0.029	13.7	0.0	0.043	13.1	0.0	1.3	1	0	0	1	1	1	0	Beta-eliminating	lyase
ABC_tran	PF00005.27	gi|288559764|ref|YP_003423250.1|	-	3.4e-39	134.5	0.1	2.7e-19	70.1	0.1	2.6	2	1	0	2	2	2	2	ABC	transporter
AAA_21	PF13304.6	gi|288559764|ref|YP_003423250.1|	-	4.2e-09	36.7	5.9	0.2	11.5	0.4	4.4	2	2	2	4	4	4	3	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
RLI	PF04068.15	gi|288559764|ref|YP_003423250.1|	-	8e-09	35.2	3.4	1.6e-08	34.2	3.4	1.6	1	0	0	1	1	1	1	Possible	Fer4-like	domain	in	RNase	L	inhibitor,	RLI
SMC_N	PF02463.19	gi|288559764|ref|YP_003423250.1|	-	3.6e-08	33.1	6.6	0.00075	19.0	0.7	3.3	2	2	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
Fer4	PF00037.27	gi|288559764|ref|YP_003423250.1|	-	3.9e-07	29.6	1.4	3.9e-07	29.6	1.4	2.3	3	0	0	3	3	2	1	4Fe-4S	binding	domain
RsgA_GTPase	PF03193.16	gi|288559764|ref|YP_003423250.1|	-	0.00012	22.0	0.0	0.17	11.7	0.0	3.0	3	0	0	3	3	3	1	RsgA	GTPase
Fer4_21	PF14697.6	gi|288559764|ref|YP_003423250.1|	-	0.00034	20.7	8.6	0.00058	19.9	8.6	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|288559764|ref|YP_003423250.1|	-	0.00046	20.1	0.9	0.00046	20.1	0.9	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
RNA_helicase	PF00910.22	gi|288559764|ref|YP_003423250.1|	-	0.001	19.4	0.2	0.95	9.9	0.0	2.7	2	0	0	2	2	2	1	RNA	helicase
AAA_24	PF13479.6	gi|288559764|ref|YP_003423250.1|	-	0.0012	18.6	0.1	0.64	9.7	0.0	2.9	2	0	0	2	2	2	1	AAA	domain
AAA	PF00004.29	gi|288559764|ref|YP_003423250.1|	-	0.0014	19.1	0.1	4.9	7.6	0.0	3.2	3	0	0	3	3	3	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
Fer4_9	PF13187.6	gi|288559764|ref|YP_003423250.1|	-	0.0018	18.4	9.0	0.0032	17.6	9.0	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|288559764|ref|YP_003423250.1|	-	0.0024	18.5	8.9	0.0046	17.5	8.9	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|288559764|ref|YP_003423250.1|	-	0.0026	17.8	1.2	0.0026	17.8	1.2	2.4	2	0	0	2	2	2	1	4Fe-4S	binding	domain
NB-ARC	PF00931.22	gi|288559764|ref|YP_003423250.1|	-	0.0035	16.6	0.7	0.17	11.0	0.0	2.4	2	0	0	2	2	2	1	NB-ARC	domain
Rad17	PF03215.15	gi|288559764|ref|YP_003423250.1|	-	0.0035	17.3	0.1	1.5	8.7	0.0	3.0	2	1	0	2	2	2	1	Rad17	P-loop	domain
AAA_13	PF13166.6	gi|288559764|ref|YP_003423250.1|	-	0.0046	15.7	0.1	0.039	12.6	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
Fer4_10	PF13237.6	gi|288559764|ref|YP_003423250.1|	-	0.0065	16.6	11.2	0.0083	16.2	1.1	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
VirE	PF05272.11	gi|288559764|ref|YP_003423250.1|	-	0.011	15.5	0.0	1.3	8.8	0.0	2.3	2	0	0	2	2	2	0	Virulence-associated	protein	E
G-alpha	PF00503.20	gi|288559764|ref|YP_003423250.1|	-	0.012	14.8	0.0	0.035	13.3	0.0	1.7	2	0	0	2	2	2	0	G-protein	alpha	subunit
RuvB_N	PF05496.12	gi|288559764|ref|YP_003423250.1|	-	0.019	14.7	0.1	2.8	7.7	0.0	3.2	3	0	0	3	3	3	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
NACHT	PF05729.12	gi|288559764|ref|YP_003423250.1|	-	0.024	14.5	0.3	8	6.3	0.0	2.6	2	0	0	2	2	2	0	NACHT	domain
SbcCD_C	PF13558.6	gi|288559764|ref|YP_003423250.1|	-	0.03	14.5	0.0	17	5.7	0.0	2.8	2	1	0	2	2	2	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_22	PF13401.6	gi|288559764|ref|YP_003423250.1|	-	0.034	14.4	0.2	27	5.0	0.0	3.4	3	1	0	3	3	3	0	AAA	domain
DLIC	PF05783.11	gi|288559764|ref|YP_003423250.1|	-	0.056	12.3	0.6	0.22	10.3	0.0	2.1	2	0	0	2	2	2	0	Dynein	light	intermediate	chain	(DLIC)
MukB	PF04310.12	gi|288559764|ref|YP_003423250.1|	-	0.057	13.2	0.1	0.95	9.2	0.0	2.4	2	0	0	2	2	2	0	MukB	N-terminal
AAA_29	PF13555.6	gi|288559764|ref|YP_003423250.1|	-	0.088	12.6	2.0	0.94	9.3	0.4	2.7	3	0	0	3	3	2	0	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.6	gi|288559764|ref|YP_003423250.1|	-	0.13	12.0	3.7	4.7	6.8	0.3	2.7	2	1	0	2	2	2	0	AAA	ATPase	domain
AAA_16	PF13191.6	gi|288559764|ref|YP_003423250.1|	-	0.13	12.7	0.1	1.6	9.1	0.0	2.5	2	1	0	2	2	2	0	AAA	ATPase	domain
AAA_33	PF13671.6	gi|288559764|ref|YP_003423250.1|	-	0.17	12.0	1.0	6.2	7.0	0.2	3.3	2	2	0	2	2	2	0	AAA	domain
Fer4_16	PF13484.6	gi|288559764|ref|YP_003423250.1|	-	0.26	12.3	9.1	0.23	12.4	2.0	2.5	1	1	1	2	2	2	0	4Fe-4S	double	cluster	binding	domain
AAA_23	PF13476.6	gi|288559764|ref|YP_003423250.1|	-	0.52	10.8	6.4	5.2	7.5	2.4	3.0	2	1	0	2	2	2	0	AAA	domain
Fer4_8	PF13183.6	gi|288559764|ref|YP_003423250.1|	-	3.8	8.0	8.5	2	8.9	2.4	2.0	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
PTH2	PF01981.16	gi|288559765|ref|YP_003423251.1|	-	2.3e-41	140.8	0.2	2.5e-41	140.6	0.2	1.0	1	0	0	1	1	1	1	Peptidyl-tRNA	hydrolase	PTH2
PanZ	PF12568.8	gi|288559765|ref|YP_003423251.1|	-	0.021	14.5	0.0	0.029	14.1	0.0	1.3	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain,	PanZ
HTH_19	PF12844.7	gi|288559765|ref|YP_003423251.1|	-	0.067	13.2	0.0	0.1	12.6	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
7tm_6	PF02949.20	gi|288559766|ref|YP_003423252.1|	-	0.0063	15.6	11.4	0.071	12.2	11.4	2.3	1	1	0	1	1	1	1	7tm	Odorant	receptor
ACR_tran	PF00873.19	gi|288559766|ref|YP_003423252.1|	-	0.021	12.5	2.1	0.044	11.5	2.1	1.5	1	0	0	1	1	1	0	AcrB/AcrD/AcrF	family
DUF4013	PF13197.6	gi|288559767|ref|YP_003423253.1|	-	1.2e-21	77.3	13.2	1.2e-21	77.3	13.2	1.9	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF4013)
ENOD93	PF03386.14	gi|288559767|ref|YP_003423253.1|	-	0.093	12.6	0.1	0.6	10.0	0.0	2.1	2	0	0	2	2	2	0	Early	nodulin	93	ENOD93	protein
Baculo_11_kDa	PF06143.11	gi|288559767|ref|YP_003423253.1|	-	0.18	11.4	7.5	0.69	9.5	0.3	3.3	3	0	0	3	3	3	0	Baculovirus	11	kDa	family
Abhydrolase_3	PF07859.13	gi|288559768|ref|YP_003423254.1|	-	2.4e-37	128.8	0.0	3.1e-37	128.5	0.0	1.1	1	0	0	1	1	1	1	alpha/beta	hydrolase	fold
Say1_Mug180	PF10340.9	gi|288559768|ref|YP_003423254.1|	-	1e-12	47.7	1.5	5.3e-10	38.7	1.0	3.2	2	1	0	2	2	2	2	Steryl	acetyl	hydrolase
Hydrolase_4	PF12146.8	gi|288559768|ref|YP_003423254.1|	-	0.054	12.8	0.0	0.19	11.0	0.0	1.8	2	0	0	2	2	2	0	Serine	aminopeptidase,	S33
Acyl_transf_3	PF01757.22	gi|288559769|ref|YP_003423255.1|	-	1.5e-33	116.3	39.9	1.7e-33	116.1	39.9	1.0	1	0	0	1	1	1	1	Acyltransferase	family
NADH5_C	PF06455.11	gi|288559769|ref|YP_003423255.1|	-	0.00088	18.9	4.4	0.00088	18.9	4.4	3.1	3	1	0	3	3	3	1	NADH	dehydrogenase	subunit	5	C-terminus
STAS	PF01740.21	gi|288559770|ref|YP_003423256.1|	-	1.4e-12	47.3	0.2	1.5e-12	47.2	0.2	1.0	1	0	0	1	1	1	1	STAS	domain
STAS_2	PF13466.6	gi|288559770|ref|YP_003423256.1|	-	9.9e-08	32.2	0.0	1.2e-07	32.0	0.0	1.1	1	0	0	1	1	1	1	STAS	domain
ACPS	PF01648.20	gi|288559771|ref|YP_003423257.1|	-	3.9e-13	49.5	0.2	2e-12	47.2	0.0	2.1	2	1	1	3	3	3	1	4'-phosphopantetheinyl	transferase	superfamily
SpoIIE	PF07228.12	gi|288559772|ref|YP_003423258.1|	-	3.1e-43	148.0	0.0	5e-43	147.3	0.0	1.4	1	0	0	1	1	1	1	Stage	II	sporulation	protein	E	(SpoIIE)
HATPase_c_2	PF13581.6	gi|288559773|ref|YP_003423259.1|	-	3.3e-16	59.4	0.0	3.7e-16	59.2	0.0	1.1	1	0	0	1	1	1	1	Histidine	kinase-like	ATPase	domain
HATPase_c	PF02518.26	gi|288559773|ref|YP_003423259.1|	-	0.021	15.3	0.1	0.029	14.9	0.1	1.3	1	0	0	1	1	1	0	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
TfoX_N	PF04993.13	gi|288559774|ref|YP_003423260.1|	-	1.1e-11	44.8	0.1	1.6e-11	44.3	0.1	1.3	1	1	0	1	1	1	1	TfoX	N-terminal	domain
AA_kinase	PF00696.28	gi|288559775|ref|YP_003423261.1|	-	2.4e-15	56.8	0.0	2.8e-15	56.6	0.0	1.2	1	0	0	1	1	1	1	Amino	acid	kinase	family
DUF1610	PF07754.11	gi|288559776|ref|YP_003423262.1|	-	0.00035	20.5	1.0	0.00035	20.5	1.0	2.1	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF1610)
zinc-ribbons_6	PF07191.12	gi|288559776|ref|YP_003423262.1|	-	0.0059	16.6	9.2	0.008	16.1	9.2	1.3	1	0	0	1	1	1	1	zinc-ribbons
Sgf11	PF08209.11	gi|288559776|ref|YP_003423262.1|	-	0.022	14.3	1.0	0.022	14.3	1.0	2.9	3	1	1	4	4	4	0	Sgf11	(transcriptional	regulation	protein)
tRNA-synt_1g	PF09334.11	gi|288559776|ref|YP_003423262.1|	-	0.1	11.3	4.3	0.11	11.3	4.3	1.0	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(M)
HypA	PF01155.19	gi|288559776|ref|YP_003423262.1|	-	0.16	12.0	11.0	0.033	14.2	5.6	1.9	1	1	1	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zf-RING_7	PF02591.15	gi|288559776|ref|YP_003423262.1|	-	0.23	11.7	9.8	1.3	9.3	0.8	3.2	3	0	0	3	3	3	0	C4-type	zinc	ribbon	domain
DUF530	PF04409.12	gi|288559776|ref|YP_003423262.1|	-	0.66	8.3	2.9	0.69	8.2	2.9	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF530)
zf-Mss51	PF13824.6	gi|288559776|ref|YP_003423262.1|	-	1.8	8.7	8.8	0.22	11.7	4.4	1.8	1	1	1	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
zf_UBZ	PF18439.1	gi|288559776|ref|YP_003423262.1|	-	2.7	7.7	15.7	0.57	9.8	1.0	3.1	3	1	1	4	4	4	0	Ubiquitin-Binding	Zinc	Finger
DUF1451	PF07295.11	gi|288559776|ref|YP_003423262.1|	-	3.7	7.6	6.5	9.5	6.2	6.5	1.7	1	1	0	1	1	1	0	Zinc-ribbon	containing	domain
EF1_GNE	PF00736.19	gi|288559777|ref|YP_003423263.1|	-	3.7e-19	68.7	0.1	4.1e-19	68.5	0.1	1.0	1	0	0	1	1	1	1	EF-1	guanine	nucleotide	exchange	domain
TctA	PF01970.16	gi|288559778|ref|YP_003423264.1|	-	2.4e-66	224.2	43.9	2.8e-66	224.0	43.9	1.0	1	0	0	1	1	1	1	Tripartite	tricarboxylate	transporter	TctA	family
T2SSE	PF00437.20	gi|288559779|ref|YP_003423265.1|	-	8.9e-66	221.7	0.4	1.3e-65	221.2	0.4	1.1	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
Dynamin_N	PF00350.23	gi|288559779|ref|YP_003423265.1|	-	0.0005	20.2	0.4	0.0074	16.4	0.1	2.5	2	0	0	2	2	2	1	Dynamin	family
AAA_28	PF13521.6	gi|288559779|ref|YP_003423265.1|	-	0.0018	18.6	0.0	0.0038	17.5	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
Zeta_toxin	PF06414.12	gi|288559779|ref|YP_003423265.1|	-	0.0037	16.6	0.0	0.008	15.5	0.0	1.5	1	0	0	1	1	1	1	Zeta	toxin
AAA_29	PF13555.6	gi|288559779|ref|YP_003423265.1|	-	0.0053	16.5	0.0	0.012	15.4	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
ABC_ATPase	PF09818.9	gi|288559779|ref|YP_003423265.1|	-	0.008	15.0	0.0	0.015	14.2	0.0	1.4	1	0	0	1	1	1	1	Predicted	ATPase	of	the	ABC	class
FtsK_SpoIIIE	PF01580.18	gi|288559779|ref|YP_003423265.1|	-	0.013	14.8	0.3	0.036	13.4	0.1	1.7	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
ABC_tran	PF00005.27	gi|288559779|ref|YP_003423265.1|	-	0.015	15.8	0.1	0.041	14.4	0.1	1.8	1	0	0	1	1	1	0	ABC	transporter
EZH2_WD-Binding	PF11616.8	gi|288559779|ref|YP_003423265.1|	-	0.081	13.0	1.3	0.21	11.7	0.3	2.2	2	0	0	2	2	2	0	WD	repeat	binding	protein	EZH2
AAA_16	PF13191.6	gi|288559779|ref|YP_003423265.1|	-	0.099	13.0	0.0	0.21	12.0	0.0	1.5	1	0	0	1	1	1	0	AAA	ATPase	domain
CbiA	PF01656.23	gi|288559779|ref|YP_003423265.1|	-	0.13	12.4	0.0	0.3	11.1	0.0	1.8	1	0	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
T2SSF	PF00482.23	gi|288559781|ref|YP_003423267.1|	-	3.6e-20	72.2	1.0	3.6e-20	72.2	1.0	2.1	3	0	0	3	3	3	1	Type	II	secretion	system	(T2SS),	protein	F
DUF2207	PF09972.9	gi|288559781|ref|YP_003423267.1|	-	0.0025	16.7	1.2	0.0028	16.5	1.2	1.2	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2207)
HSR	PF03172.13	gi|288559781|ref|YP_003423267.1|	-	0.027	14.6	0.2	0.05	13.8	0.2	1.5	1	0	0	1	1	1	0	HSR	domain
DUF2304	PF10066.9	gi|288559781|ref|YP_003423267.1|	-	0.44	10.8	8.2	0.67	10.2	5.6	2.1	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2304)
Fibrillarin_2	PF10113.9	gi|288559782|ref|YP_003423268.1|	-	1.1e-261	868.7	0.3	1.3e-261	868.6	0.3	1.0	1	0	0	1	1	1	1	Fibrillarin-like	archaeal	protein
HMD	PF03201.16	gi|288559783|ref|YP_003423269.1|	-	6.1e-39	132.1	0.7	5.2e-38	129.2	0.2	2.3	2	0	0	2	2	2	1	H2-forming	N5,N10-methylene-tetrahydromethanopterin	dehydrogenase
PDH	PF02153.17	gi|288559783|ref|YP_003423269.1|	-	0.15	11.0	0.0	0.25	10.3	0.0	1.2	1	0	0	1	1	1	0	Prephenate	dehydrogenase
Radical_SAM	PF04055.21	gi|288559784|ref|YP_003423270.1|	-	1.2e-13	51.8	0.1	1.4e-12	48.3	0.1	2.2	2	0	0	2	2	2	1	Radical	SAM	superfamily
BATS	PF06968.13	gi|288559784|ref|YP_003423270.1|	-	1.5e-08	34.7	0.0	6.5e-08	32.6	0.0	2.1	2	0	0	2	2	2	1	Biotin	and	Thiamin	Synthesis	associated	domain
DUF3236	PF11576.8	gi|288559785|ref|YP_003423271.1|	-	3.1e-70	234.8	0.1	3.4e-70	234.6	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3236)
2Fe-2S_thioredx	PF01257.19	gi|288559785|ref|YP_003423271.1|	-	0.041	13.7	0.0	0.067	13.1	0.0	1.4	1	0	0	1	1	1	0	Thioredoxin-like	[2Fe-2S]	ferredoxin
DUF1188	PF06690.11	gi|288559786|ref|YP_003423272.1|	-	5.7e-24	85.0	1.8	6.8e-24	84.8	1.8	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1188)
ThiF	PF00899.21	gi|288559786|ref|YP_003423272.1|	-	0.003	17.0	0.0	0.0082	15.5	0.0	1.7	2	0	0	2	2	2	1	ThiF	family
DUF1188	PF06690.11	gi|288559787|ref|YP_003423273.1|	-	1.1e-50	172.6	1.2	1.2e-50	172.4	1.2	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1188)
NIF3	PF01784.18	gi|288559788|ref|YP_003423274.1|	-	3e-35	122.0	0.0	6.3e-29	101.3	0.0	2.0	1	1	1	2	2	2	2	NIF3	(NGG1p	interacting	factor	3)
ThiF	PF00899.21	gi|288559789|ref|YP_003423275.1|	-	1.4e-06	27.8	0.1	2.4e-06	27.1	0.1	1.3	1	1	0	1	1	1	1	ThiF	family
UPF0254	PF06787.11	gi|288559790|ref|YP_003423276.1|	-	4.1e-67	225.0	0.1	6.1e-67	224.5	0.1	1.2	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0254)
CinA	PF02464.17	gi|288559790|ref|YP_003423276.1|	-	0.0019	17.7	0.2	0.42	10.2	0.2	2.2	2	0	0	2	2	2	2	Competence-damaged	protein
Hydrolase	PF00702.26	gi|288559791|ref|YP_003423277.1|	-	8.9e-39	134.0	1.2	1.5e-38	133.3	1.2	1.4	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
E1-E2_ATPase	PF00122.20	gi|288559791|ref|YP_003423277.1|	-	8.7e-34	116.6	3.1	1.2e-33	116.1	1.3	2.1	3	0	0	3	3	3	1	E1-E2	ATPase
Hydrolase_3	PF08282.12	gi|288559791|ref|YP_003423277.1|	-	6.4e-08	32.7	8.9	3.3e-07	30.3	0.3	4.5	5	0	0	5	5	5	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.7	gi|288559791|ref|YP_003423277.1|	-	0.00051	20.5	0.0	0.0024	18.3	0.0	2.1	1	1	1	2	2	2	1	haloacid	dehalogenase-like	hydrolase
CoA_binding_2	PF13380.6	gi|288559791|ref|YP_003423277.1|	-	0.026	15.0	0.1	1.1	9.7	0.0	2.7	1	1	1	2	2	2	0	CoA	binding	domain
Glyco_tran_WecB	PF03808.13	gi|288559791|ref|YP_003423277.1|	-	0.037	14.0	0.2	0.68	9.9	0.1	2.5	1	1	0	2	2	2	0	Glycosyl	transferase	WecB/TagA/CpsF	family
MoeA_N	PF03453.17	gi|288559791|ref|YP_003423277.1|	-	0.06	13.1	0.0	0.12	12.1	0.0	1.5	1	0	0	1	1	1	0	MoeA	N-terminal	region	(domain	I	and	II)
HAD_2	PF13419.6	gi|288559791|ref|YP_003423277.1|	-	0.061	13.4	0.5	0.44	10.6	0.5	2.5	1	1	0	1	1	1	0	Haloacid	dehalogenase-like	hydrolase
Hydrolase_6	PF13344.6	gi|288559791|ref|YP_003423277.1|	-	0.072	13.2	0.7	9.7	6.4	0.0	3.8	4	1	0	4	4	4	0	Haloacid	dehalogenase-like	hydrolase
Flavodoxin_1	PF00258.25	gi|288559791|ref|YP_003423277.1|	-	0.075	13.2	0.1	1.8	8.8	0.0	2.4	2	0	0	2	2	2	0	Flavodoxin
LPP	PF04728.13	gi|288559792|ref|YP_003423278.1|	-	0.027	14.8	3.6	0.051	14.0	3.6	1.4	1	0	0	1	1	1	0	Lipoprotein	leucine-zipper
DUF3185	PF11381.8	gi|288559792|ref|YP_003423278.1|	-	0.033	14.2	0.0	0.052	13.6	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3185)
FeoB_C	PF07664.12	gi|288559792|ref|YP_003423278.1|	-	0.24	11.1	0.1	0.33	10.7	0.1	1.2	1	0	0	1	1	1	0	Ferrous	iron	transport	protein	B	C	terminus
FeoA	PF04023.14	gi|288559793|ref|YP_003423279.1|	-	1.8e-16	60.2	0.0	2e-16	60.0	0.0	1.0	1	0	0	1	1	1	1	FeoA	domain
FeoB_N	PF02421.18	gi|288559794|ref|YP_003423280.1|	-	1e-61	207.0	1.8	1.9e-61	206.2	1.8	1.5	1	0	0	1	1	1	1	Ferrous	iron	transport	protein	B
Gate	PF07670.14	gi|288559794|ref|YP_003423280.1|	-	7.3e-47	158.3	18.2	4.5e-31	107.4	6.7	2.7	2	0	0	2	2	2	2	Nucleoside	recognition
FeoB_C	PF07664.12	gi|288559794|ref|YP_003423280.1|	-	5.1e-21	74.1	1.1	5.1e-21	74.1	1.1	3.8	5	0	0	5	5	5	1	Ferrous	iron	transport	protein	B	C	terminus
MMR_HSR1	PF01926.23	gi|288559794|ref|YP_003423280.1|	-	8.1e-19	67.8	0.1	2.4e-18	66.3	0.1	1.8	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
FeoB_Cyto	PF17910.1	gi|288559794|ref|YP_003423280.1|	-	1.5e-17	63.9	1.4	1.5e-17	63.9	1.4	1.7	2	0	0	2	2	2	1	FeoB	cytosolic	helical	domain
SRPRB	PF09439.10	gi|288559794|ref|YP_003423280.1|	-	1.3e-05	24.8	0.0	2.4e-05	23.8	0.0	1.4	1	0	0	1	1	1	1	Signal	recognition	particle	receptor	beta	subunit
RsgA_GTPase	PF03193.16	gi|288559794|ref|YP_003423280.1|	-	0.03	14.2	1.6	1.2	9.0	0.1	2.3	2	0	0	2	2	2	0	RsgA	GTPase
PduV-EutP	PF10662.9	gi|288559794|ref|YP_003423280.1|	-	0.043	13.5	0.1	0.11	12.2	0.1	1.8	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
Asp4	PF16996.5	gi|288559794|ref|YP_003423280.1|	-	0.097	12.5	0.1	0.28	11.0	0.1	1.8	1	0	0	1	1	1	0	Accessory	secretory	protein	Sec	Asp4
AAA_18	PF13238.6	gi|288559794|ref|YP_003423280.1|	-	0.21	12.1	0.5	1.1	9.8	0.0	2.3	2	1	0	2	2	2	0	AAA	domain
AveC_like	PF17198.4	gi|288559794|ref|YP_003423280.1|	-	3.7	6.9	9.9	0.059	12.8	1.7	2.2	3	0	0	3	3	3	0	Spirocyclase	AveC-like
Peptidase_C27	PF05407.12	gi|288559795|ref|YP_003423281.1|	-	0.0065	16.6	0.0	0.0072	16.4	0.0	1.1	1	0	0	1	1	1	1	Rubella	virus	endopeptidase
Rubredoxin	PF00301.20	gi|288559795|ref|YP_003423281.1|	-	0.016	15.2	1.9	0.016	15.2	1.9	2.8	1	1	2	3	3	3	0	Rubredoxin
NOB1_Zn_bind	PF08772.11	gi|288559795|ref|YP_003423281.1|	-	0.021	15.0	4.4	0.021	15.0	4.4	1.8	2	0	0	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
UPF0547	PF10571.9	gi|288559795|ref|YP_003423281.1|	-	0.17	12.0	0.2	0.17	12.0	0.2	3.4	2	1	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
FYVE_2	PF02318.16	gi|288559795|ref|YP_003423281.1|	-	0.28	11.4	3.7	0.37	11.0	3.7	1.3	1	1	0	1	1	1	0	FYVE-type	zinc	finger
zf-piccolo	PF05715.13	gi|288559795|ref|YP_003423281.1|	-	0.96	9.6	10.6	3.5	7.9	5.6	2.3	1	1	1	2	2	2	0	Piccolo	Zn-finger
Zn-ribbon_8	PF09723.10	gi|288559795|ref|YP_003423281.1|	-	2.7	8.2	15.7	2.8e+02	1.8	15.7	2.8	1	1	0	1	1	1	0	Zinc	ribbon	domain
IBR	PF01485.21	gi|288559795|ref|YP_003423281.1|	-	4.5	7.6	14.4	98	3.3	14.4	2.2	1	1	0	1	1	1	0	IBR	domain,	a	half	RING-finger	domain
CbiM	PF01891.16	gi|288559796|ref|YP_003423282.1|	-	6.6e-56	189.4	23.3	7.4e-56	189.3	23.3	1.0	1	0	0	1	1	1	1	Cobalt	uptake	substrate-specific	transmembrane	region
PDGLE	PF13190.6	gi|288559797|ref|YP_003423283.1|	-	6.4e-12	45.2	0.6	2.4e-11	43.4	0.5	1.9	1	1	0	1	1	1	1	PDGLE	domain
HCMV_UL124	PF17609.2	gi|288559797|ref|YP_003423283.1|	-	0.0078	16.4	0.0	0.011	16.0	0.0	1.2	1	0	0	1	1	1	1	Family	of	unknown	function
OppC_N	PF12911.7	gi|288559797|ref|YP_003423283.1|	-	0.5	10.4	0.0	0.5	10.4	0.0	2.0	2	0	0	2	2	2	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
CbiQ	PF02361.16	gi|288559798|ref|YP_003423284.1|	-	8.2e-49	166.2	5.6	1.2e-48	165.6	5.6	1.2	1	0	0	1	1	1	1	Cobalt	transport	protein
O_anti_polymase	PF01901.16	gi|288559799|ref|YP_003423285.1|	-	1.4e-107	359.9	29.7	2.1e-107	359.3	29.7	1.3	1	0	0	1	1	1	1	Putative	O-antigen	polymerase
DUF1772	PF08592.11	gi|288559799|ref|YP_003423285.1|	-	0.2	12.0	2.2	0.63	10.3	0.0	2.7	2	1	0	3	3	3	0	Domain	of	unknown	function	(DUF1772)
FeoB_associated	PF12669.7	gi|288559800|ref|YP_003423286.1|	-	0.0024	18.2	0.3	0.0041	17.5	0.3	1.3	1	0	0	1	1	1	1	FeoB-associated	Cys-rich	membrane	protein
DUF5390	PF17365.2	gi|288559800|ref|YP_003423286.1|	-	0.0048	17.2	0.3	0.013	15.8	0.1	1.7	2	0	0	2	2	2	1	Family	of	unknown	function	(DUF5390)
DUF4330	PF14221.6	gi|288559800|ref|YP_003423286.1|	-	0.03	14.6	0.6	0.03	14.6	0.6	2.0	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4330)
TPK_catalytic	PF04263.16	gi|288559800|ref|YP_003423286.1|	-	0.19	11.8	2.5	1	9.5	0.4	2.6	2	1	0	2	2	2	0	Thiamin	pyrophosphokinase,	catalytic	domain
Fer4	PF00037.27	gi|288559801|ref|YP_003423287.1|	-	1.7e-09	37.1	16.5	1.5e-05	24.6	3.8	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|288559801|ref|YP_003423287.1|	-	1.8e-08	35.2	9.2	0.00046	21.1	1.9	2.0	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_9	PF13187.6	gi|288559801|ref|YP_003423287.1|	-	2.8e-07	30.6	9.6	3.7e-07	30.2	9.6	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|288559801|ref|YP_003423287.1|	-	5.7e-06	26.4	12.3	0.00021	21.3	13.8	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|288559801|ref|YP_003423287.1|	-	8.1e-06	26.3	10.5	0.0089	16.6	0.8	2.1	1	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|288559801|ref|YP_003423287.1|	-	1.2e-05	25.3	13.3	2.6e-05	24.2	13.3	1.5	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|288559801|ref|YP_003423287.1|	-	3.4e-05	24.3	8.2	0.013	16.1	1.3	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|288559801|ref|YP_003423287.1|	-	4.6e-05	23.3	10.9	0.0066	16.5	1.1	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|288559801|ref|YP_003423287.1|	-	0.00028	21.3	8.3	0.12	12.9	1.2	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|288559801|ref|YP_003423287.1|	-	0.0024	17.9	15.7	0.16	12.1	3.6	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|288559801|ref|YP_003423287.1|	-	0.014	15.6	11.4	0.046	13.9	11.6	1.6	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|288559801|ref|YP_003423287.1|	-	0.019	15.9	15.0	0.26	12.3	2.8	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|288559801|ref|YP_003423287.1|	-	0.099	13.2	14.1	0.97	10.0	3.3	2.1	1	1	1	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
zf-CXXC	PF02008.20	gi|288559801|ref|YP_003423287.1|	-	0.1	12.6	9.0	0.96	9.5	0.7	2.1	2	0	0	2	2	2	0	CXXC	zinc	finger	domain
Fer4_15	PF13459.6	gi|288559801|ref|YP_003423287.1|	-	0.11	13.2	1.3	0.11	13.2	1.3	2.3	1	1	1	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_4	PF12800.7	gi|288559801|ref|YP_003423287.1|	-	1.4	9.6	16.8	0.58	10.8	1.8	2.7	2	1	0	2	2	2	0	4Fe-4S	binding	domain
Tetraspanin	PF00335.20	gi|288559802|ref|YP_003423288.1|	-	0.0018	18.0	3.0	0.0027	17.5	0.0	2.5	3	0	0	3	3	3	1	Tetraspanin	family
FtsX	PF02687.21	gi|288559802|ref|YP_003423288.1|	-	0.082	13.4	12.8	0.44	11.0	2.2	2.2	2	0	0	2	2	2	0	FtsX-like	permease	family
DUF4834	PF16118.5	gi|288559802|ref|YP_003423288.1|	-	0.35	11.9	6.9	0.52	11.3	0.0	3.0	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4834)
Rab5ip	PF07019.12	gi|288559802|ref|YP_003423288.1|	-	0.63	10.7	7.9	12	6.5	0.1	2.7	2	1	0	2	2	2	0	Rab5-interacting	protein	(Rab5ip)
DHHC	PF01529.20	gi|288559802|ref|YP_003423288.1|	-	4.3	7.5	6.5	44	4.2	6.5	2.2	1	1	0	1	1	1	0	DHHC	palmitoyltransferase
TFIIS_C	PF01096.18	gi|288559803|ref|YP_003423289.1|	-	2.5e-17	62.4	3.0	2.5e-17	62.4	3.0	2.7	3	0	0	3	3	3	1	Transcription	factor	S-II	(TFIIS)
RNA_POL_M_15KD	PF02150.16	gi|288559803|ref|YP_003423289.1|	-	1.3e-07	31.4	3.3	1.3e-07	31.4	3.3	3.0	3	0	0	3	3	3	1	RNA	polymerases	M/15	Kd	subunit
DZR	PF12773.7	gi|288559803|ref|YP_003423289.1|	-	0.00016	21.6	4.6	0.22	11.5	0.2	2.4	2	1	0	2	2	2	2	Double	zinc	ribbon
Baculo_LEF5_C	PF11792.8	gi|288559803|ref|YP_003423289.1|	-	0.0035	17.0	6.9	0.0035	17.0	0.0	3.0	3	0	0	3	3	3	1	Baculoviridae	late	expression	factor	5	C-terminal	domain
zf-ribbon_3	PF13248.6	gi|288559803|ref|YP_003423289.1|	-	0.0035	16.7	12.2	0.4	10.2	2.8	3.5	3	1	0	3	3	3	2	zinc-ribbon	domain
zinc_ribbon_4	PF13717.6	gi|288559803|ref|YP_003423289.1|	-	0.0065	16.4	6.8	0.96	9.4	0.6	3.6	3	0	0	3	3	3	1	zinc-ribbon	domain
Zn-ribbon_8	PF09723.10	gi|288559803|ref|YP_003423289.1|	-	0.036	14.2	5.3	7.5	6.8	0.1	3.6	4	0	0	4	4	4	0	Zinc	ribbon	domain
zf-NADH-PPase	PF09297.11	gi|288559803|ref|YP_003423289.1|	-	0.045	13.4	0.4	0.045	13.4	0.4	2.4	3	0	0	3	3	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
zinc_ribbon_10	PF10058.9	gi|288559803|ref|YP_003423289.1|	-	0.13	12.0	5.3	0.1	12.3	0.8	2.3	2	1	0	2	2	2	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
Prok-RING_1	PF14446.6	gi|288559803|ref|YP_003423289.1|	-	0.2	11.6	0.7	0.2	11.6	0.7	2.7	3	0	0	3	3	3	0	Prokaryotic	RING	finger	family	1
RIG-I_C-RD	PF11648.8	gi|288559803|ref|YP_003423289.1|	-	0.3	11.3	7.7	0.48	10.7	3.3	2.1	1	1	1	2	2	2	0	C-terminal	domain	of	RIG-I
DNA_RNApol_7kD	PF03604.13	gi|288559803|ref|YP_003423289.1|	-	0.39	10.4	9.3	10	5.9	1.4	3.5	3	1	0	3	3	3	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-ACC	PF17848.1	gi|288559803|ref|YP_003423289.1|	-	0.46	10.6	7.4	3.8	7.7	0.2	3.3	3	0	0	3	3	3	0	Acetyl-coA	carboxylase	zinc	finger	domain
Nudix_N_2	PF14803.6	gi|288559803|ref|YP_003423289.1|	-	0.51	10.3	0.1	0.51	10.3	0.1	3.4	4	0	0	4	4	4	0	Nudix	N-terminal
DUF2752	PF10825.8	gi|288559803|ref|YP_003423289.1|	-	0.69	10.0	0.1	0.69	10.0	0.1	2.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2752)
NOB1_Zn_bind	PF08772.11	gi|288559803|ref|YP_003423289.1|	-	1.7	8.9	11.2	1	9.6	1.4	3.3	2	1	1	3	3	3	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
zinc_ribbon_2	PF13240.6	gi|288559803|ref|YP_003423289.1|	-	2.2	8.1	17.9	1.7	8.5	4.9	3.8	3	1	0	3	3	3	0	zinc-ribbon	domain
Rpr2	PF04032.16	gi|288559803|ref|YP_003423289.1|	-	2.5	8.4	7.4	4.7	7.6	4.7	2.4	2	1	0	2	2	2	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
OrfB_Zn_ribbon	PF07282.11	gi|288559803|ref|YP_003423289.1|	-	3.8	7.5	9.5	3.5	7.6	0.5	2.8	2	1	0	2	2	2	0	Putative	transposase	DNA-binding	domain
RPA_interact_C	PF14768.6	gi|288559803|ref|YP_003423289.1|	-	4.8	7.8	6.6	51	4.5	6.6	2.6	1	1	0	1	1	1	0	Replication	protein	A	interacting	C-terminal
UPF0547	PF10571.9	gi|288559803|ref|YP_003423289.1|	-	5.1	7.3	11.1	7.2	6.8	0.8	3.4	4	0	0	4	4	4	0	Uncharacterised	protein	family	UPF0547
CPBP	PF02517.16	gi|288559804|ref|YP_003423290.1|	-	1.9e-13	50.6	6.2	1.9e-13	50.6	6.2	2.5	2	1	0	2	2	2	1	CPBP	intramembrane	metalloprotease
Myc_target_1	PF15179.6	gi|288559804|ref|YP_003423290.1|	-	0.07	13.0	0.4	0.21	11.5	0.4	1.7	1	0	0	1	1	1	0	Myc	target	protein	1
DUF3671	PF12420.8	gi|288559804|ref|YP_003423290.1|	-	0.4	10.8	19.7	0.42	10.7	7.4	3.2	3	1	0	3	3	3	0	Protein	of	unknown	function
POR	PF01558.18	gi|288559805|ref|YP_003423291.1|	-	1.1e-39	136.4	0.4	1.4e-39	136.0	0.4	1.1	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
Torsin	PF06309.11	gi|288559805|ref|YP_003423291.1|	-	0.07	13.2	0.0	0.12	12.5	0.0	1.3	1	0	0	1	1	1	0	Torsin
Fer4	PF00037.27	gi|288559806|ref|YP_003423292.1|	-	2.7e-11	42.8	19.4	2e-07	30.5	4.5	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|288559806|ref|YP_003423292.1|	-	3.2e-08	33.3	19.5	9.5e-05	22.3	4.8	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|288559806|ref|YP_003423292.1|	-	4.5e-08	33.1	15.8	1.5e-07	31.4	15.8	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|288559806|ref|YP_003423292.1|	-	8.6e-08	31.8	11.1	0.00033	20.6	1.7	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|288559806|ref|YP_003423292.1|	-	3.5e-06	27.9	14.2	0.0056	17.6	3.2	2.3	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_10	PF13237.6	gi|288559806|ref|YP_003423292.1|	-	4.2e-06	26.8	15.2	0.0046	17.1	2.6	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|288559806|ref|YP_003423292.1|	-	4.9e-06	27.0	13.8	0.0014	19.2	15.3	2.2	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|288559806|ref|YP_003423292.1|	-	2e-05	24.6	27.2	0.00097	19.3	15.5	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|288559806|ref|YP_003423292.1|	-	0.0044	17.4	16.7	0.2	12.2	4.5	2.6	2	1	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_22	PF17179.4	gi|288559806|ref|YP_003423292.1|	-	0.0077	17.1	11.7	0.72	10.7	2.1	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|288559806|ref|YP_003423292.1|	-	0.012	16.1	15.5	0.38	11.3	4.9	2.2	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|288559806|ref|YP_003423292.1|	-	0.023	15.1	15.2	0.075	13.5	3.0	2.2	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|288559806|ref|YP_003423292.1|	-	0.042	14.4	16.7	0.11	13.1	4.5	3.0	2	1	1	3	3	3	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_15	PF13459.6	gi|288559806|ref|YP_003423292.1|	-	0.088	13.6	17.3	1.9	9.3	5.5	2.8	1	1	1	2	2	2	0	4Fe-4S	single	cluster	domain
POR_N	PF01855.19	gi|288559807|ref|YP_003423293.1|	-	5.2e-73	245.6	1.8	6.5e-73	245.3	1.8	1.1	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
PFOR_II	PF17147.4	gi|288559807|ref|YP_003423293.1|	-	1.7e-30	105.3	0.0	4.7e-30	103.9	0.0	1.8	1	0	0	1	1	1	1	Pyruvate:ferredoxin	oxidoreductase	core	domain	II
Transketolase_C	PF02780.20	gi|288559807|ref|YP_003423293.1|	-	6.2e-11	42.3	0.0	2e-10	40.6	0.0	1.8	2	0	0	2	2	2	1	Transketolase,	C-terminal	domain
TPP_enzyme_C	PF02775.21	gi|288559808|ref|YP_003423294.1|	-	1.9e-30	105.7	0.3	1.9e-30	105.7	0.3	1.9	1	1	1	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
VKOR	PF07884.14	gi|288559808|ref|YP_003423294.1|	-	0.066	13.4	0.2	0.11	12.7	0.2	1.3	1	0	0	1	1	1	0	Vitamin	K	epoxide	reductase	family
Fer4_6	PF12837.7	gi|288559809|ref|YP_003423295.1|	-	1.1e-12	47.5	35.7	2.8e-05	24.0	3.4	4.4	4	0	0	4	4	4	4	4Fe-4S	binding	domain
Fer4	PF00037.27	gi|288559809|ref|YP_003423295.1|	-	8e-11	41.3	37.8	1.3e-08	34.3	3.1	5.8	6	0	0	6	6	6	3	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|288559809|ref|YP_003423295.1|	-	6.1e-10	39.5	31.6	5.1e-05	23.8	2.0	3.8	2	2	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_11	PF13247.6	gi|288559809|ref|YP_003423295.1|	-	5.6e-07	29.6	14.0	5.6e-07	29.6	14.0	2.3	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|288559809|ref|YP_003423295.1|	-	1.2e-06	28.5	32.2	0.0079	16.3	11.4	3.5	2	2	2	4	4	4	4	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|288559809|ref|YP_003423295.1|	-	1.3e-06	28.1	31.0	0.00052	19.9	2.1	4.2	4	0	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|288559809|ref|YP_003423295.1|	-	1.1e-05	25.5	31.8	0.0043	17.1	12.2	2.7	1	1	2	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|288559809|ref|YP_003423295.1|	-	0.0002	21.6	37.0	0.044	14.3	3.5	4.8	4	1	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|288559809|ref|YP_003423295.1|	-	0.00066	20.6	31.6	0.047	14.6	6.6	4.5	3	1	1	4	4	4	2	4Fe-4S	double	cluster	binding	domain
Fer4_3	PF12798.7	gi|288559809|ref|YP_003423295.1|	-	0.0037	18.1	41.6	0.15	13.1	3.3	4.3	4	0	0	4	4	4	3	4Fe-4S	binding	domain
DDE_Tnp_1_6	PF13751.6	gi|288559809|ref|YP_003423295.1|	-	0.047	13.9	1.0	0.047	13.9	1.0	2.6	2	1	1	3	3	3	0	Transposase	DDE	domain
Fer4_13	PF13370.6	gi|288559809|ref|YP_003423295.1|	-	0.085	13.4	2.7	0.085	13.4	2.7	3.7	4	2	0	4	4	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_5	PF12801.7	gi|288559809|ref|YP_003423295.1|	-	0.087	12.8	3.1	0.86	9.6	0.7	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|288559809|ref|YP_003423295.1|	-	0.091	13.2	3.6	0.091	13.2	3.6	4.1	2	2	1	3	3	2	0	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|288559809|ref|YP_003423295.1|	-	0.12	12.9	1.8	0.12	12.9	1.8	4.3	2	1	4	6	6	6	0	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|288559809|ref|YP_003423295.1|	-	0.34	11.1	32.6	0.69	10.1	11.6	3.5	2	2	1	3	3	3	0	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|288559810|ref|YP_003423296.1|	-	8.6e-21	72.8	33.1	1.2e-08	34.4	2.1	5.5	6	0	0	6	6	6	4	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|288559810|ref|YP_003423296.1|	-	6.9e-18	63.9	32.7	4.6e-07	29.6	2.3	4.5	4	1	0	4	4	4	4	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|288559810|ref|YP_003423296.1|	-	6.2e-13	49.1	30.7	6.7e-05	23.4	12.3	4.2	1	1	4	5	5	5	5	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|288559810|ref|YP_003423296.1|	-	5.6e-12	45.0	30.9	3.8e-05	23.5	1.6	4.3	4	0	0	4	4	4	4	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|288559810|ref|YP_003423296.1|	-	1.4e-11	44.3	58.6	2.3e-05	24.5	8.6	3.4	1	1	4	5	5	5	5	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|288559810|ref|YP_003423296.1|	-	6.1e-11	42.5	42.3	0.0081	17.0	2.9	4.2	4	0	0	4	4	4	4	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|288559810|ref|YP_003423296.1|	-	1.5e-09	38.6	32.6	0.0057	17.6	1.3	4.8	2	1	4	6	6	6	4	4Fe-4S	double	cluster	binding	domain
Fer4_10	PF13237.6	gi|288559810|ref|YP_003423296.1|	-	3.1e-09	36.8	32.4	6.2e-06	26.2	12.0	3.6	2	2	2	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|288559810|ref|YP_003423296.1|	-	1.9e-07	31.0	31.7	0.004	17.5	1.5	4.9	3	2	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|288559810|ref|YP_003423296.1|	-	3.6e-07	30.2	34.2	1.2e-05	25.3	11.7	4.0	2	2	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|288559810|ref|YP_003423296.1|	-	8.3e-05	23.1	31.0	0.0078	16.7	2.2	4.4	2	1	2	4	4	4	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|288559810|ref|YP_003423296.1|	-	0.0024	18.3	32.7	0.0071	16.8	3.6	4.3	2	2	1	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|288559810|ref|YP_003423296.1|	-	0.049	13.8	29.2	1.5	9.0	8.4	3.4	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|288559810|ref|YP_003423296.1|	-	0.052	14.1	1.9	0.052	14.1	1.9	4.4	4	1	0	4	4	4	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_22	PF17179.4	gi|288559810|ref|YP_003423296.1|	-	3.8	8.4	25.9	0.44	11.4	3.0	3.9	3	1	1	4	4	4	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|288559810|ref|YP_003423296.1|	-	9.5	7.1	29.1	6.4	7.6	10.9	4.5	3	2	0	3	3	3	0	4Fe-4S	single	cluster	domain
SET	PF00856.28	gi|288559811|ref|YP_003423297.1|	-	0.028	14.8	0.7	0.13	12.6	0.6	2.0	1	1	0	1	1	1	0	SET	domain
Lsr2	PF11774.8	gi|288559811|ref|YP_003423297.1|	-	0.16	12.1	0.4	0.25	11.5	0.4	1.3	1	0	0	1	1	1	0	Lsr2
Septum_form	PF13845.6	gi|288559812|ref|YP_003423298.1|	-	0.017	14.7	0.0	0.019	14.5	0.0	1.1	1	0	0	1	1	1	0	Septum	formation
Fumerase	PF05681.14	gi|288559813|ref|YP_003423299.1|	-	4e-95	318.3	0.0	4.5e-95	318.1	0.0	1.0	1	0	0	1	1	1	1	Fumarate	hydratase	(Fumerase)
C-C_Bond_Lyase	PF15617.6	gi|288559813|ref|YP_003423299.1|	-	0.04	13.1	0.0	0.053	12.7	0.0	1.1	1	0	0	1	1	1	0	C-C_Bond_Lyase	of	the	TIM-Barrel	fold
DUF4346	PF14251.6	gi|288559814|ref|YP_003423300.1|	-	2.7e-14	53.2	0.1	6.8e-14	51.9	0.1	1.7	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4346)
Pterin_bind	PF00809.22	gi|288559814|ref|YP_003423300.1|	-	1.5e-11	44.5	0.1	3.7e-11	43.2	0.1	1.7	1	0	0	1	1	1	1	Pterin	binding	enzyme
DUF4405	PF14358.6	gi|288559815|ref|YP_003423301.1|	-	6.4e-05	23.4	13.7	0.00025	21.5	0.6	2.9	3	0	0	3	3	3	2	Domain	of	unknown	function	(DUF4405)
Ni_hydr_CYTB	PF01292.20	gi|288559815|ref|YP_003423301.1|	-	0.034	13.8	4.3	0.09	12.4	4.3	1.7	1	1	0	1	1	1	0	Prokaryotic	cytochrome	b561
DUF4079	PF13301.6	gi|288559815|ref|YP_003423301.1|	-	0.048	13.8	0.6	0.064	13.4	0.6	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4079)
DUF4199	PF13858.6	gi|288559815|ref|YP_003423301.1|	-	0.13	12.6	5.2	0.17	12.2	5.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4199)
MFS_1	PF07690.16	gi|288559816|ref|YP_003423302.1|	-	1.1e-26	93.6	69.2	5.7e-25	88.0	37.4	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.24	gi|288559816|ref|YP_003423302.1|	-	2.8e-09	36.3	15.0	2.8e-09	36.3	15.0	2.9	1	1	1	3	3	3	2	Sugar	(and	other)	transporter
MFS_3	PF05977.13	gi|288559816|ref|YP_003423302.1|	-	0.83	8.0	16.4	0.7	8.2	5.2	2.2	2	0	0	2	2	2	0	Transmembrane	secretion	effector
AAA_5	PF07728.14	gi|288559817|ref|YP_003423303.1|	-	4.7e-17	62.3	0.0	8.8e-17	61.4	0.0	1.4	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_3	PF07726.11	gi|288559817|ref|YP_003423303.1|	-	1.8e-15	56.9	0.0	3.3e-07	30.2	0.0	2.3	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA	PF00004.29	gi|288559817|ref|YP_003423303.1|	-	3.1e-12	47.0	0.2	1.6e-11	44.7	0.2	2.0	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_2	PF07724.14	gi|288559817|ref|YP_003423303.1|	-	1.1e-09	38.7	0.0	2.2e-09	37.7	0.0	1.5	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
AAA_16	PF13191.6	gi|288559817|ref|YP_003423303.1|	-	2.1e-08	34.8	0.1	1.3e-07	32.2	0.1	2.0	1	1	0	1	1	1	1	AAA	ATPase	domain
RuvB_N	PF05496.12	gi|288559817|ref|YP_003423303.1|	-	6.4e-06	26.0	0.0	0.0082	15.9	0.0	2.5	2	0	0	2	2	2	2	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_22	PF13401.6	gi|288559817|ref|YP_003423303.1|	-	6.9e-06	26.4	0.1	2.8e-05	24.4	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.6	gi|288559817|ref|YP_003423303.1|	-	9.8e-06	26.1	0.0	2.5e-05	24.8	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
Sigma54_activat	PF00158.26	gi|288559817|ref|YP_003423303.1|	-	3.5e-05	23.6	0.0	0.071	12.8	0.0	2.2	2	0	0	2	2	2	2	Sigma-54	interaction	domain
AAA_14	PF13173.6	gi|288559817|ref|YP_003423303.1|	-	0.0002	21.4	0.1	0.0018	18.3	0.1	2.4	1	1	0	1	1	1	1	AAA	domain
AAA_19	PF13245.6	gi|288559817|ref|YP_003423303.1|	-	0.00039	20.8	0.1	0.39	11.0	0.0	2.6	2	1	1	3	3	3	1	AAA	domain
IstB_IS21	PF01695.17	gi|288559817|ref|YP_003423303.1|	-	0.00045	20.0	0.0	0.002	17.9	0.0	2.0	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
AAA_6	PF12774.7	gi|288559817|ref|YP_003423303.1|	-	0.00059	18.9	0.0	0.0012	17.9	0.0	1.5	1	0	0	1	1	1	1	Hydrolytic	ATP	binding	site	of	dynein	motor	region
TsaE	PF02367.17	gi|288559817|ref|YP_003423303.1|	-	0.00098	19.1	0.0	0.0018	18.3	0.0	1.4	1	0	0	1	1	1	1	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
NACHT	PF05729.12	gi|288559817|ref|YP_003423303.1|	-	0.0011	18.9	0.0	0.018	15.0	0.0	2.3	2	0	0	2	2	2	1	NACHT	domain
MCM	PF00493.23	gi|288559817|ref|YP_003423303.1|	-	0.0017	17.5	0.0	0.1	11.7	0.0	2.3	2	0	0	2	2	2	1	MCM	P-loop	domain
TIP49	PF06068.13	gi|288559817|ref|YP_003423303.1|	-	0.0024	17.1	0.2	0.04	13.1	0.0	2.5	3	0	0	3	3	3	1	TIP49	P-loop	domain
NTPase_1	PF03266.15	gi|288559817|ref|YP_003423303.1|	-	0.0025	17.7	0.0	0.029	14.3	0.0	2.3	1	1	0	1	1	1	1	NTPase
RNA_helicase	PF00910.22	gi|288559817|ref|YP_003423303.1|	-	0.0036	17.7	0.0	0.0077	16.6	0.0	1.6	1	0	0	1	1	1	1	RNA	helicase
Mg_chelatase	PF01078.21	gi|288559817|ref|YP_003423303.1|	-	0.005	16.2	0.0	0.073	12.4	0.0	2.0	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
DNA_pol3_delta2	PF13177.6	gi|288559817|ref|YP_003423303.1|	-	0.0069	16.2	0.6	0.34	10.7	0.2	3.2	1	1	1	2	2	2	1	DNA	polymerase	III,	delta	subunit
AAA_7	PF12775.7	gi|288559817|ref|YP_003423303.1|	-	0.01	15.3	0.0	0.018	14.6	0.0	1.3	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
AAA_33	PF13671.6	gi|288559817|ref|YP_003423303.1|	-	0.011	15.8	0.0	0.02	15.1	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_30	PF13604.6	gi|288559817|ref|YP_003423303.1|	-	0.013	15.2	0.0	0.12	12.0	0.0	2.1	1	1	0	1	1	1	0	AAA	domain
AAA_24	PF13479.6	gi|288559817|ref|YP_003423303.1|	-	0.013	15.2	0.1	0.033	13.9	0.0	1.8	2	1	0	2	2	2	0	AAA	domain
MMR_HSR1	PF01926.23	gi|288559817|ref|YP_003423303.1|	-	0.018	15.1	0.0	0.054	13.6	0.0	1.9	2	1	0	2	2	1	0	50S	ribosome-binding	GTPase
ABC_tran	PF00005.27	gi|288559817|ref|YP_003423303.1|	-	0.02	15.4	0.2	0.39	11.2	0.0	2.5	2	1	0	3	3	3	0	ABC	transporter
dNK	PF01712.19	gi|288559817|ref|YP_003423303.1|	-	0.022	14.6	0.0	0.048	13.5	0.0	1.6	1	0	0	1	1	1	0	Deoxynucleoside	kinase
Guanylate_kin	PF00625.21	gi|288559817|ref|YP_003423303.1|	-	0.022	14.4	0.0	0.86	9.3	0.0	2.3	2	0	0	2	2	2	0	Guanylate	kinase
Sigma54_activ_2	PF14532.6	gi|288559817|ref|YP_003423303.1|	-	0.028	14.5	0.2	0.37	10.9	0.2	2.3	1	1	0	1	1	1	0	Sigma-54	interaction	domain
AAA_28	PF13521.6	gi|288559817|ref|YP_003423303.1|	-	0.032	14.5	0.0	0.055	13.7	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
NB-ARC	PF00931.22	gi|288559817|ref|YP_003423303.1|	-	0.04	13.1	0.0	0.074	12.2	0.0	1.4	1	0	0	1	1	1	0	NB-ARC	domain
ATPase_2	PF01637.18	gi|288559817|ref|YP_003423303.1|	-	0.043	13.7	0.1	0.12	12.3	0.0	2.0	1	1	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
AAA_11	PF13086.6	gi|288559817|ref|YP_003423303.1|	-	0.078	12.8	0.0	0.084	12.6	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
SKI	PF01202.22	gi|288559817|ref|YP_003423303.1|	-	0.093	12.9	0.0	0.29	11.2	0.0	1.9	1	0	0	1	1	1	0	Shikimate	kinase
VWA_CoxE	PF05762.14	gi|288559818|ref|YP_003423304.1|	-	2.1e-49	167.9	0.0	3.8e-49	167.1	0.0	1.3	1	0	0	1	1	1	1	VWA	domain	containing	CoxE-like	protein
ATP_bind_3	PF01171.20	gi|288559819|ref|YP_003423305.1|	-	2.5e-14	53.4	0.0	3.7e-14	52.9	0.0	1.2	1	0	0	1	1	1	1	PP-loop	family
zn-ribbon_14	PF16503.5	gi|288559819|ref|YP_003423305.1|	-	7.1e-10	38.2	1.0	7.1e-10	38.2	1.0	4.2	4	1	0	4	4	4	1	Zinc-ribbon
tRNA_Me_trans	PF03054.16	gi|288559819|ref|YP_003423305.1|	-	3.7e-07	29.3	0.0	5.2e-07	28.8	0.0	1.3	1	0	0	1	1	1	1	tRNA	methyl	transferase
PAPS_reduct	PF01507.19	gi|288559819|ref|YP_003423305.1|	-	0.0017	18.4	0.0	0.0028	17.7	0.0	1.3	1	0	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
Diphthami_syn_2	PF01902.17	gi|288559819|ref|YP_003423305.1|	-	0.0018	17.8	0.0	0.0027	17.2	0.0	1.3	1	0	0	1	1	1	1	Diphthamide	synthase
Asn_synthase	PF00733.21	gi|288559819|ref|YP_003423305.1|	-	0.019	14.6	0.0	0.024	14.3	0.0	1.1	1	0	0	1	1	1	0	Asparagine	synthase
eIF-1a	PF01176.19	gi|288559819|ref|YP_003423305.1|	-	0.054	13.3	0.0	0.12	12.2	0.0	1.5	1	0	0	1	1	1	0	Translation	initiation	factor	1A	/	IF-1
NAD_synthase	PF02540.17	gi|288559819|ref|YP_003423305.1|	-	0.055	12.6	0.0	0.085	12.0	0.0	1.4	1	0	0	1	1	1	0	NAD	synthase
TF_Zn_Ribbon	PF08271.12	gi|288559819|ref|YP_003423305.1|	-	0.083	12.4	0.2	0.083	12.4	0.2	3.3	3	1	1	4	4	4	0	TFIIB	zinc-binding
QueC	PF06508.13	gi|288559819|ref|YP_003423305.1|	-	0.1	12.1	0.5	0.27	10.7	0.0	2.0	3	0	0	3	3	3	0	Queuosine	biosynthesis	protein	QueC
zf-UBR	PF02207.20	gi|288559819|ref|YP_003423305.1|	-	0.14	12.4	7.4	2.6	8.3	0.1	2.8	3	0	0	3	3	3	0	Putative	zinc	finger	in	N-recognin	(UBR	box)
CobS_N	PF12556.8	gi|288559819|ref|YP_003423305.1|	-	0.21	11.4	0.0	0.46	10.2	0.0	1.5	1	0	0	1	1	1	0	Cobaltochelatase	CobS	subunit	N	terminal
DZR	PF12773.7	gi|288559819|ref|YP_003423305.1|	-	3.6	7.7	10.7	3.2	7.9	0.6	3.1	3	0	0	3	3	3	0	Double	zinc	ribbon
NMD3	PF04981.13	gi|288559819|ref|YP_003423305.1|	-	7	6.0	12.3	0.86	9.0	1.0	2.5	3	0	0	3	3	3	0	NMD3	family
ThiS	PF02597.20	gi|288559820|ref|YP_003423306.1|	-	6.2e-10	39.6	0.2	7.2e-10	39.4	0.2	1.1	1	0	0	1	1	1	1	ThiS	family
DUF2187	PF09953.9	gi|288559820|ref|YP_003423306.1|	-	0.12	12.4	2.2	0.44	10.6	0.2	2.3	2	1	1	3	3	3	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2187)
ThiS-like	PF14453.6	gi|288559820|ref|YP_003423306.1|	-	0.15	12.1	3.2	0.21	11.7	3.2	1.1	1	0	0	1	1	1	0	ThiS-like	ubiquitin
DUF89	PF01937.19	gi|288559821|ref|YP_003423307.1|	-	3.3e-44	151.3	0.7	3.8e-44	151.1	0.7	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF89
UMPH-1	PF05822.12	gi|288559821|ref|YP_003423307.1|	-	0.0043	16.6	1.6	0.0098	15.4	0.5	1.8	1	1	1	2	2	2	1	Pyrimidine	5'-nucleotidase	(UMPH-1)
DUF5587	PF17825.1	gi|288559821|ref|YP_003423307.1|	-	0.049	10.9	0.6	0.055	10.8	0.6	1.0	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5587)
DUF1932	PF09130.11	gi|288559822|ref|YP_003423308.1|	-	4.7e-05	23.3	0.0	7.8e-05	22.6	0.0	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1932)
F420_oxidored	PF03807.17	gi|288559822|ref|YP_003423308.1|	-	0.011	16.3	0.0	0.033	14.8	0.0	1.8	1	0	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
HIGH_NTase1_ass	PF16581.5	gi|288559823|ref|YP_003423309.1|	-	7.9e-11	42.3	3.0	4.5e-10	39.9	3.0	2.1	1	1	1	2	2	2	1	Cytidyltransferase-related	C-terminal	region
HIGH_NTase1	PF05636.11	gi|288559823|ref|YP_003423309.1|	-	1.7e-08	34.1	0.3	0.00021	20.7	0.1	2.3	2	0	0	2	2	2	2	HIGH	Nucleotidyl	Transferase
CTP_transf_like	PF01467.26	gi|288559823|ref|YP_003423309.1|	-	9.2e-05	22.7	0.0	0.00026	21.2	0.0	1.9	1	1	0	1	1	1	1	Cytidylyltransferase-like
FAD_syn	PF06574.12	gi|288559823|ref|YP_003423309.1|	-	0.00011	22.1	0.0	0.00024	21.0	0.0	1.5	1	0	0	1	1	1	1	FAD	synthetase
DUF308	PF03729.13	gi|288559824|ref|YP_003423310.1|	-	8e-08	32.5	45.4	0.00063	20.0	19.9	3.1	1	1	2	3	3	3	3	Short	repeat	of	unknown	function	(DUF308)
DUF2273	PF10031.9	gi|288559824|ref|YP_003423310.1|	-	0.034	14.1	1.9	0.034	14.1	1.9	5.6	6	0	0	6	6	6	0	Small	integral	membrane	protein	(DUF2273)
YfhO	PF09586.10	gi|288559824|ref|YP_003423310.1|	-	0.27	9.4	11.2	0.35	9.0	11.2	1.1	1	0	0	1	1	1	0	Bacterial	membrane	protein	YfhO
Radical_SAM	PF04055.21	gi|288559825|ref|YP_003423311.1|	-	0.0023	18.3	0.8	0.0076	16.6	0.8	2.0	1	1	0	1	1	1	1	Radical	SAM	superfamily
FliG_M	PF14841.6	gi|288559825|ref|YP_003423311.1|	-	0.14	12.4	0.1	0.94	9.7	0.2	2.3	2	1	0	2	2	2	0	FliG	middle	domain
DUF3486	PF11985.8	gi|288559825|ref|YP_003423311.1|	-	0.22	11.9	0.1	2.9	8.3	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3486)
Bac_luciferase	PF00296.20	gi|288559826|ref|YP_003423312.1|	-	2.3e-51	175.1	0.1	2.6e-51	174.9	0.1	1.1	1	0	0	1	1	1	1	Luciferase-like	monooxygenase
DUF1211	PF06736.11	gi|288559827|ref|YP_003423313.1|	-	3.1e-12	46.7	0.7	3.4e-12	46.6	0.7	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1211)
DUF3925	PF13063.6	gi|288559828|ref|YP_003423314.1|	-	0.025	14.8	3.7	0.041	14.1	3.7	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3925)
YIF1	PF03878.15	gi|288559828|ref|YP_003423314.1|	-	0.37	10.3	3.9	0.41	10.1	3.9	1.1	1	0	0	1	1	1	0	YIF1
DUF3795	PF12675.7	gi|288559829|ref|YP_003423315.1|	-	9.2e-08	32.4	9.3	9.2e-08	32.4	9.3	1.8	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF3795)
Rho_N	PF07498.12	gi|288559829|ref|YP_003423315.1|	-	0.0011	18.9	1.4	0.063	13.2	0.8	2.6	2	0	0	2	2	2	1	Rho	termination	factor,	N-terminal	domain
MSP7_C	PF12948.7	gi|288559829|ref|YP_003423315.1|	-	0.19	12.4	8.6	0.25	12.0	8.6	1.1	1	0	0	1	1	1	0	MSP7-like	protein	C-terminal	domain
DUF1128	PF06569.11	gi|288559829|ref|YP_003423315.1|	-	1.4	9.0	5.0	0.82	9.7	0.4	2.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1128)
Fer4_4	PF12800.7	gi|288559829|ref|YP_003423315.1|	-	7.3	7.4	10.0	1.8	9.2	3.0	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
C_GCAxxG_C_C	PF09719.10	gi|288559830|ref|YP_003423316.1|	-	1.7e-18	67.0	1.0	2.2e-18	66.7	1.0	1.1	1	0	0	1	1	1	1	Putative	redox-active	protein	(C_GCAxxG_C_C)
Acetyltransf_1	PF00583.25	gi|288559831|ref|YP_003423317.1|	-	1.3e-12	48.0	0.0	1.6e-12	47.7	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.7	gi|288559831|ref|YP_003423317.1|	-	4.8e-08	33.3	0.1	6.2e-08	33.0	0.1	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.7	gi|288559831|ref|YP_003423317.1|	-	3.1e-06	27.1	0.0	3.8e-06	26.9	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.7	gi|288559831|ref|YP_003423317.1|	-	0.00095	19.3	0.0	0.001	19.2	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.10	gi|288559831|ref|YP_003423317.1|	-	0.0067	16.4	0.0	0.011	15.7	0.0	1.4	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_3	PF13302.7	gi|288559831|ref|YP_003423317.1|	-	0.13	12.9	0.0	0.14	12.8	0.0	1.2	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
DUF169	PF02596.15	gi|288559832|ref|YP_003423318.1|	-	8.6e-50	169.5	0.0	9.6e-50	169.4	0.0	1.0	1	0	0	1	1	1	1	Uncharacterised	ArCR,	COG2043
SfsA	PF03749.13	gi|288559833|ref|YP_003423319.1|	-	1.6e-21	76.7	0.0	2.2e-21	76.2	0.0	1.2	1	0	0	1	1	1	1	Sugar	fermentation	stimulation	protein	RE	domain
SfsA_N	PF17746.1	gi|288559833|ref|YP_003423319.1|	-	8.4e-19	67.5	0.0	1.5e-18	66.7	0.0	1.5	1	0	0	1	1	1	1	SfsA	N-terminal	OB	domain
ApoC-I	PF04691.12	gi|288559833|ref|YP_003423319.1|	-	0.057	13.3	0.7	1.2	9.2	0.2	2.5	2	0	0	2	2	2	0	Apolipoprotein	C-I	(ApoC-1)
TetR_C_8	PF14278.6	gi|288559834|ref|YP_003423320.1|	-	8.9e-08	32.2	1.6	8.9e-08	32.2	1.6	2.3	1	1	1	2	2	2	1	Transcriptional	regulator	C-terminal	region
TetR_N	PF00440.23	gi|288559834|ref|YP_003423320.1|	-	2.3e-07	30.5	0.0	4.6e-07	29.5	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	tetR	family
HTH_Tnp_1_2	PF13022.6	gi|288559834|ref|YP_003423320.1|	-	5.9e-07	29.7	2.5	5.9e-07	29.7	2.5	1.7	1	1	1	2	2	2	1	Helix-turn-helix	of	insertion	element	transposase
BACK	PF07707.15	gi|288559834|ref|YP_003423320.1|	-	0.001	19.1	1.2	0.98	9.5	0.3	3.2	3	0	0	3	3	3	1	BTB	And	C-terminal	Kelch
HTH_AraC	PF00165.23	gi|288559834|ref|YP_003423320.1|	-	0.0092	16.1	0.0	0.02	15.0	0.0	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	helix-turn-helix	proteins,	AraC	family
Syntaxin	PF00804.25	gi|288559834|ref|YP_003423320.1|	-	0.021	14.5	2.8	0.029	14.0	2.8	1.2	1	0	0	1	1	1	0	Syntaxin
FliG_N	PF14842.6	gi|288559834|ref|YP_003423320.1|	-	0.035	14.7	1.6	0.13	12.8	1.6	2.0	1	1	0	1	1	1	0	FliG	N-terminal	domain
DUF4209	PF13910.6	gi|288559834|ref|YP_003423320.1|	-	0.32	11.3	1.3	3.8	7.8	0.2	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4209)
HAD_2	PF13419.6	gi|288559834|ref|YP_003423320.1|	-	0.33	11.0	7.5	0.35	10.9	6.1	1.6	1	1	1	2	2	2	0	Haloacid	dehalogenase-like	hydrolase
Mit_KHE1	PF10173.9	gi|288559834|ref|YP_003423320.1|	-	2	8.5	6.3	4.1	7.4	0.6	2.0	1	1	1	2	2	2	0	Mitochondrial	K+-H+	exchange-related
DDE_Tnp_1	PF01609.21	gi|288559835|ref|YP_003423321.1|	-	5.1e-16	59.0	0.6	8.7e-16	58.2	0.6	1.3	1	0	0	1	1	1	1	Transposase	DDE	domain
Skp1	PF01466.19	gi|288559835|ref|YP_003423321.1|	-	0.07	13.3	0.1	0.17	12.0	0.1	1.7	1	0	0	1	1	1	0	Skp1	family,	dimerisation	domain
DUF3173	PF11372.8	gi|288559835|ref|YP_003423321.1|	-	0.13	12.2	2.2	0.22	11.4	0.3	2.5	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF3173)
Aldo_ket_red	PF00248.21	gi|288559836|ref|YP_003423322.1|	-	1e-62	212.0	0.1	1.1e-62	211.8	0.1	1.0	1	0	0	1	1	1	1	Aldo/keto	reductase	family
FMN_red	PF03358.15	gi|288559837|ref|YP_003423323.1|	-	4.5e-21	75.2	0.0	5.1e-21	75.0	0.0	1.1	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.17	gi|288559837|ref|YP_003423323.1|	-	3.5e-17	62.8	0.0	4.6e-17	62.4	0.0	1.1	1	0	0	1	1	1	1	Flavodoxin-like	fold
PLDc_2	PF13091.6	gi|288559837|ref|YP_003423323.1|	-	0.01	15.7	0.1	0.55	10.1	0.0	2.1	2	0	0	2	2	2	0	PLD-like	domain
DUF3100	PF11299.8	gi|288559838|ref|YP_003423324.1|	-	3.1e-83	278.8	15.9	3.1e-83	278.8	15.9	2.4	2	1	0	2	2	2	2	Protein	of	unknown	function	(DUF3100)
PhoU	PF01895.19	gi|288559839|ref|YP_003423325.1|	-	7.3e-23	80.9	11.0	6.7e-14	52.1	0.1	2.7	3	0	0	3	3	3	2	PhoU	domain
HTH_24	PF13412.6	gi|288559839|ref|YP_003423325.1|	-	5.2e-08	32.3	0.2	1.1e-07	31.2	0.2	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.22	gi|288559839|ref|YP_003423325.1|	-	5.6e-05	23.0	0.0	0.00043	20.1	0.0	2.2	2	0	0	2	2	2	1	MarR	family
MarR_2	PF12802.7	gi|288559839|ref|YP_003423325.1|	-	0.00022	21.1	0.0	0.0013	18.6	0.0	2.1	2	0	0	2	2	2	1	MarR	family
Sigma70_r4	PF04545.16	gi|288559839|ref|YP_003423325.1|	-	0.00053	19.4	0.0	0.0015	18.0	0.0	1.8	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_Crp_2	PF13545.6	gi|288559839|ref|YP_003423325.1|	-	0.0015	18.5	0.0	0.014	15.3	0.0	2.4	3	0	0	3	3	3	1	Crp-like	helix-turn-helix	domain
Rrf2	PF02082.20	gi|288559839|ref|YP_003423325.1|	-	0.0024	18.2	0.0	0.0062	16.9	0.0	1.7	1	0	0	1	1	1	1	Transcriptional	regulator
TrmB	PF01978.19	gi|288559839|ref|YP_003423325.1|	-	0.0033	17.3	0.2	0.015	15.2	0.0	2.1	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_11	PF08279.12	gi|288559839|ref|YP_003423325.1|	-	0.0074	16.2	0.1	0.017	15.1	0.1	1.6	1	0	0	1	1	1	1	HTH	domain
TFIIE_alpha	PF02002.17	gi|288559839|ref|YP_003423325.1|	-	0.033	14.0	1.2	0.057	13.3	0.2	2.0	2	0	0	2	2	2	0	TFIIE	alpha	subunit
HTH_23	PF13384.6	gi|288559839|ref|YP_003423325.1|	-	0.047	13.5	0.0	0.16	11.8	0.0	1.9	2	0	0	2	2	2	0	Homeodomain-like	domain
HTH_19	PF12844.7	gi|288559839|ref|YP_003423325.1|	-	0.058	13.4	0.1	0.17	11.9	0.1	1.8	1	0	0	1	1	1	0	Helix-turn-helix	domain
Glyco_hydro_4C	PF11975.8	gi|288559839|ref|YP_003423325.1|	-	0.067	13.3	1.0	0.6	10.1	0.0	2.2	2	0	0	2	2	2	0	Family	4	glycosyl	hydrolase	C-terminal	domain
COMPASS-Shg1	PF05205.12	gi|288559839|ref|YP_003423325.1|	-	0.073	13.8	0.3	0.073	13.8	0.3	2.9	3	0	0	3	3	3	0	COMPASS	(Complex	proteins	associated	with	Set1p)	component	shg1
OEP	PF02321.18	gi|288559839|ref|YP_003423325.1|	-	0.092	12.5	0.9	0.13	12.1	0.1	1.5	2	0	0	2	2	2	0	Outer	membrane	efflux	protein
HTH_3	PF01381.22	gi|288559839|ref|YP_003423325.1|	-	0.16	12.1	0.1	0.43	10.7	0.1	1.8	1	0	0	1	1	1	0	Helix-turn-helix
Nudix_N	PF12535.8	gi|288559839|ref|YP_003423325.1|	-	0.18	11.4	1.2	8.7	6.0	0.0	3.1	3	0	0	3	3	3	0	Hydrolase	of	X-linked	nucleoside	diphosphate	N	terminal
MutS_V	PF00488.21	gi|288559840|ref|YP_003423326.1|	-	2.3e-11	44.1	0.3	5.1e-11	42.9	0.3	1.6	1	0	0	1	1	1	1	MutS	domain	V
AAA_14	PF13173.6	gi|288559840|ref|YP_003423326.1|	-	0.00023	21.2	0.0	0.00023	21.2	0.0	2.9	3	1	0	3	3	3	1	AAA	domain
HHH_5	PF14520.6	gi|288559840|ref|YP_003423326.1|	-	0.00032	21.2	0.7	0.0016	19.0	0.7	2.2	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
AAA_21	PF13304.6	gi|288559840|ref|YP_003423326.1|	-	0.0014	18.5	0.0	0.0053	16.6	0.0	2.1	1	0	0	1	1	1	1	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_28	PF13521.6	gi|288559840|ref|YP_003423326.1|	-	0.013	15.8	0.0	0.089	13.0	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
AAA_29	PF13555.6	gi|288559840|ref|YP_003423326.1|	-	0.014	15.1	0.0	0.03	14.1	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
Dynamin_N	PF00350.23	gi|288559840|ref|YP_003423326.1|	-	0.022	14.8	0.0	0.1	12.7	0.0	2.2	1	1	0	1	1	1	0	Dynamin	family
HHH_3	PF12836.7	gi|288559840|ref|YP_003423326.1|	-	0.023	15.0	0.6	3.8	7.8	0.1	3.2	3	0	0	3	3	3	0	Helix-hairpin-helix	motif
ABC_tran	PF00005.27	gi|288559840|ref|YP_003423326.1|	-	0.035	14.6	0.0	0.12	12.9	0.0	1.9	1	0	0	1	1	1	0	ABC	transporter
Ribosomal_S13	PF00416.22	gi|288559840|ref|YP_003423326.1|	-	0.053	13.9	0.7	0.053	13.9	0.7	2.5	2	2	1	4	4	4	0	Ribosomal	protein	S13/S18
Peptidase_U32	PF01136.19	gi|288559841|ref|YP_003423327.1|	-	3.4e-89	298.0	4.9	1e-74	250.6	0.1	3.5	3	0	0	3	3	3	2	Peptidase	family	U32
DUF3656	PF12392.8	gi|288559841|ref|YP_003423327.1|	-	1.8e-19	70.4	0.2	1.8e-19	70.4	0.2	3.7	3	1	0	3	3	3	1	Collagenase
Glyco_hydro_97	PF10566.9	gi|288559841|ref|YP_003423327.1|	-	0.66	9.2	5.0	1.9	7.7	0.0	2.8	3	0	0	3	3	3	0	Glycoside	hydrolase	97
Peptidase_U32	PF01136.19	gi|288559842|ref|YP_003423328.1|	-	6e-93	310.3	0.0	3.1e-71	239.2	0.0	2.4	2	0	0	2	2	2	2	Peptidase	family	U32
DUF3656	PF12392.8	gi|288559842|ref|YP_003423328.1|	-	2.6e-18	66.6	0.2	8.4e-18	65.0	0.2	1.9	1	0	0	1	1	1	1	Collagenase
Thymidylate_kin	PF02223.17	gi|288559843|ref|YP_003423329.1|	-	5.9e-42	143.4	0.0	6.7e-42	143.3	0.0	1.0	1	0	0	1	1	1	1	Thymidylate	kinase
PPK2	PF03976.14	gi|288559843|ref|YP_003423329.1|	-	0.00023	20.8	0.0	0.0095	15.5	0.0	2.3	2	0	0	2	2	2	1	Polyphosphate	kinase	2	(PPK2)
AAA_28	PF13521.6	gi|288559843|ref|YP_003423329.1|	-	0.00033	20.9	0.0	0.0004	20.7	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.6	gi|288559843|ref|YP_003423329.1|	-	0.00077	19.9	0.0	0.0014	19.1	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
dNK	PF01712.19	gi|288559843|ref|YP_003423329.1|	-	0.0011	18.8	0.1	0.019	14.9	0.1	2.2	1	1	0	1	1	1	1	Deoxynucleoside	kinase
AAA_18	PF13238.6	gi|288559843|ref|YP_003423329.1|	-	0.007	16.9	0.5	0.043	14.4	0.1	1.9	1	1	0	2	2	2	1	AAA	domain
AAA_30	PF13604.6	gi|288559843|ref|YP_003423329.1|	-	0.026	14.3	0.0	0.033	13.9	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
MeaB	PF03308.16	gi|288559843|ref|YP_003423329.1|	-	0.043	12.8	0.0	0.077	12.0	0.0	1.4	1	1	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
AAA_33	PF13671.6	gi|288559843|ref|YP_003423329.1|	-	0.05	13.8	0.0	0.07	13.3	0.0	1.1	1	0	0	1	1	1	0	AAA	domain
ATP_bind_1	PF03029.17	gi|288559843|ref|YP_003423329.1|	-	0.058	13.2	0.1	0.16	11.7	0.0	1.6	1	1	1	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
DUF2102	PF09875.9	gi|288559844|ref|YP_003423330.1|	-	0.012	15.3	0.0	0.013	15.2	0.0	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2102)
tRNA-synt_1b	PF00579.25	gi|288559845|ref|YP_003423331.1|	-	4.7e-49	167.3	0.1	5.9e-49	167.0	0.1	1.0	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(W	and	Y)
tRNA-synt_1f	PF01921.18	gi|288559845|ref|YP_003423331.1|	-	1e-06	27.9	0.1	0.016	14.2	0.0	2.4	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(K)
NMD3	PF04981.13	gi|288559846|ref|YP_003423332.1|	-	4.2e-53	180.3	4.3	5.3e-53	180.0	4.3	1.1	1	0	0	1	1	1	1	NMD3	family
COMP	PF11598.8	gi|288559846|ref|YP_003423332.1|	-	0.04	14.4	0.1	8.8	6.9	0.2	2.6	2	0	0	2	2	2	0	Cartilage	oligomeric	matrix	protein
Zn-ribbon_8	PF09723.10	gi|288559846|ref|YP_003423332.1|	-	0.066	13.3	5.3	9.7	6.4	0.4	3.3	3	0	0	3	3	3	0	Zinc	ribbon	domain
zf-ribbon_3	PF13248.6	gi|288559846|ref|YP_003423332.1|	-	0.79	9.2	10.2	0.74	9.3	1.4	3.2	3	0	0	3	3	3	0	zinc-ribbon	domain
Rpr2	PF04032.16	gi|288559846|ref|YP_003423332.1|	-	4.3	7.7	5.8	8.5	6.7	2.1	2.8	2	1	1	3	3	3	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
DZR	PF12773.7	gi|288559846|ref|YP_003423332.1|	-	4.6	7.3	10.4	6	7.0	1.8	2.9	1	1	0	2	2	2	0	Double	zinc	ribbon
TF_Zn_Ribbon	PF08271.12	gi|288559846|ref|YP_003423332.1|	-	6.3	6.4	11.7	71	3.0	6.7	3.6	2	1	0	2	2	2	0	TFIIB	zinc-binding
zinc_ribbon_15	PF17032.5	gi|288559846|ref|YP_003423332.1|	-	8.4	7.2	9.6	61	4.5	9.6	2.3	1	1	0	1	1	1	0	zinc-ribbon	family
HypA	PF01155.19	gi|288559846|ref|YP_003423332.1|	-	8.9	6.4	10.0	9.9	6.2	0.6	3.2	1	1	1	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
eIF-5_eIF-2B	PF01873.17	gi|288559847|ref|YP_003423333.1|	-	5.6e-37	126.2	0.1	6.8e-37	125.9	0.1	1.0	1	0	0	1	1	1	1	Domain	found	in	IF2B/IF5
Peptidase_S66C	PF17676.1	gi|288559847|ref|YP_003423333.1|	-	0.035	14.6	0.0	0.041	14.4	0.0	1.2	1	0	0	1	1	1	0	LD-carboxypeptidase	C-terminal	domain
Elf1	PF05129.13	gi|288559847|ref|YP_003423333.1|	-	0.07	13.2	0.2	0.12	12.4	0.2	1.3	1	0	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
MCM	PF00493.23	gi|288559848|ref|YP_003423334.1|	-	1.6e-98	328.3	0.0	2.5e-98	327.6	0.0	1.3	1	0	0	1	1	1	1	MCM	P-loop	domain
MCM_OB	PF17207.3	gi|288559848|ref|YP_003423334.1|	-	6.7e-30	103.5	0.1	1.1e-29	102.8	0.1	1.3	1	0	0	1	1	1	1	MCM	OB	domain
MCM_lid	PF17855.1	gi|288559848|ref|YP_003423334.1|	-	8.2e-28	96.7	0.7	2.2e-27	95.3	0.7	1.8	1	0	0	1	1	1	1	MCM	AAA-lid	domain
Mg_chelatase	PF01078.21	gi|288559848|ref|YP_003423334.1|	-	2.1e-08	33.8	0.1	8.3e-05	22.1	0.0	2.7	2	1	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
MCM_N	PF14551.6	gi|288559848|ref|YP_003423334.1|	-	2.9e-08	34.2	2.3	5e-08	33.5	0.1	2.6	3	0	0	3	3	2	1	MCM	N-terminal	domain
AAA_5	PF07728.14	gi|288559848|ref|YP_003423334.1|	-	1.3e-05	25.3	0.0	7.8e-05	22.7	0.0	2.3	2	1	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_3	PF07726.11	gi|288559848|ref|YP_003423334.1|	-	0.00062	19.6	0.0	0.0051	16.7	0.0	2.3	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sigma54_activat	PF00158.26	gi|288559848|ref|YP_003423334.1|	-	0.00068	19.4	0.1	0.038	13.7	0.1	2.4	1	1	0	1	1	1	1	Sigma-54	interaction	domain
AAA_16	PF13191.6	gi|288559848|ref|YP_003423334.1|	-	0.00079	19.8	0.1	0.0035	17.8	0.1	2.1	1	0	0	1	1	1	1	AAA	ATPase	domain
tRNA_anti-codon	PF01336.25	gi|288559848|ref|YP_003423334.1|	-	0.015	15.3	0.0	0.049	13.6	0.0	1.9	1	0	0	1	1	1	0	OB-fold	nucleic	acid	binding	domain
ABC_tran	PF00005.27	gi|288559848|ref|YP_003423334.1|	-	0.025	15.1	3.1	2.3	8.7	0.2	3.6	3	0	0	3	3	3	0	ABC	transporter
AAA_18	PF13238.6	gi|288559848|ref|YP_003423334.1|	-	0.042	14.4	0.2	0.23	12.0	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
HypA	PF01155.19	gi|288559848|ref|YP_003423334.1|	-	0.043	13.8	0.1	0.12	12.5	0.1	1.7	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
AAA	PF00004.29	gi|288559848|ref|YP_003423334.1|	-	0.047	14.1	0.1	0.22	11.9	0.0	2.3	2	1	0	2	2	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
CusF_Ec	PF11604.8	gi|288559848|ref|YP_003423334.1|	-	0.15	12.1	0.2	14	5.7	0.0	2.8	3	0	0	3	3	2	0	Copper	binding	periplasmic	protein	CusF
Zn-ribbon_8	PF09723.10	gi|288559848|ref|YP_003423334.1|	-	0.48	10.6	5.6	0.091	12.9	1.3	2.1	2	0	0	2	2	2	0	Zinc	ribbon	domain
TrkH	PF02386.16	gi|288559849|ref|YP_003423335.1|	-	0.032	12.7	0.2	0.032	12.7	0.2	1.1	1	0	0	1	1	1	0	Cation	transport	protein
SOGA	PF11365.8	gi|288559849|ref|YP_003423335.1|	-	0.095	13.8	0.5	0.34	12.1	0.4	1.7	1	1	1	2	2	2	0	Protein	SOGA
FeoB_associated	PF12669.7	gi|288559849|ref|YP_003423335.1|	-	0.54	10.7	2.7	1.1	9.7	2.7	1.4	1	0	0	1	1	1	0	FeoB-associated	Cys-rich	membrane	protein
FtsJ	PF01728.19	gi|288559850|ref|YP_003423336.1|	-	2.2e-54	184.2	0.0	2.5e-54	184.0	0.0	1.0	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
Methyltransf_23	PF13489.6	gi|288559850|ref|YP_003423336.1|	-	0.0012	18.7	0.0	0.0016	18.3	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|288559850|ref|YP_003423336.1|	-	0.002	18.0	0.1	0.031	14.1	0.0	2.0	2	0	0	2	2	2	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|288559850|ref|YP_003423336.1|	-	0.018	14.4	0.1	0.36	10.1	0.0	2.1	2	0	0	2	2	2	0	ubiE/COQ5	methyltransferase	family
MTS	PF05175.14	gi|288559850|ref|YP_003423336.1|	-	0.018	14.6	0.1	0.048	13.2	0.1	1.6	1	1	0	1	1	1	0	Methyltransferase	small	domain
Methyltransf_25	PF13649.6	gi|288559850|ref|YP_003423336.1|	-	0.17	12.6	0.0	0.99	10.2	0.0	2.1	2	1	0	2	2	2	0	Methyltransferase	domain
Metallophos_2	PF12850.7	gi|288559851|ref|YP_003423337.1|	-	2.7e-32	112.2	0.1	3.2e-32	112.0	0.1	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.28	gi|288559851|ref|YP_003423337.1|	-	2.1e-05	25.1	2.2	0.01	16.3	0.1	2.3	2	1	1	3	3	3	2	Calcineurin-like	phosphoesterase
Metallophos_3	PF14582.6	gi|288559851|ref|YP_003423337.1|	-	0.056	12.8	0.0	0.1	11.9	0.0	1.4	1	0	0	1	1	1	0	Metallophosphoesterase,	calcineurin	superfamily
PGA_cap	PF09587.10	gi|288559851|ref|YP_003423337.1|	-	0.067	12.6	0.1	0.16	11.4	0.1	1.5	1	1	0	1	1	1	0	Bacterial	capsule	synthesis	protein	PGA_cap
DUF1297	PF06973.12	gi|288559852|ref|YP_003423338.1|	-	1.4e-82	275.8	0.0	1.9e-82	275.4	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1297)
DUF1246	PF06849.12	gi|288559852|ref|YP_003423338.1|	-	3.4e-51	172.3	0.0	5e-51	171.8	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1246)
UbiA	PF01040.18	gi|288559853|ref|YP_003423339.1|	-	2.6e-05	23.6	0.6	3.8e-05	23.1	0.6	1.2	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
DUF2627	PF11118.8	gi|288559853|ref|YP_003423339.1|	-	0.066	13.8	1.4	0.28	11.8	0.8	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2627)
MerC	PF03203.14	gi|288559853|ref|YP_003423339.1|	-	0.37	11.3	3.0	0.51	10.8	3.0	1.2	1	0	0	1	1	1	0	MerC	mercury	resistance	protein
RseC_MucC	PF04246.12	gi|288559853|ref|YP_003423339.1|	-	2.6	8.0	4.3	1.4	8.8	0.7	2.0	1	1	1	2	2	2	0	Positive	regulator	of	sigma(E),	RseC/MucC
DUF5518	PF17647.1	gi|288559854|ref|YP_003423340.1|	-	4.3e-15	55.9	36.5	5.4e-15	55.6	36.5	1.0	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5518)
Band_7	PF01145.25	gi|288559855|ref|YP_003423341.1|	-	1.3e-32	113.2	11.1	3.8e-32	111.7	11.1	1.7	1	1	0	1	1	1	1	SPFH	domain	/	Band	7	family
Band_7_C	PF16200.5	gi|288559855|ref|YP_003423341.1|	-	0.014	15.4	0.0	0.05	13.6	0.0	1.9	1	0	0	1	1	1	0	C-terminal	region	of	band_7
Mis14	PF08641.12	gi|288559855|ref|YP_003423341.1|	-	0.22	11.9	5.7	0.46	10.8	5.7	1.6	1	0	0	1	1	1	0	Kinetochore	protein	Mis14	like
DUF2973	PF11189.8	gi|288559855|ref|YP_003423341.1|	-	1.1	9.4	2.7	3.3	7.8	2.7	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2973)
Flot	PF15975.5	gi|288559855|ref|YP_003423341.1|	-	1.4	9.2	13.5	8.7	6.6	0.2	2.7	3	0	0	3	3	3	0	Flotillin
NfeD	PF01957.18	gi|288559856|ref|YP_003423342.1|	-	5.9e-23	81.0	0.4	5.9e-23	81.0	0.4	1.4	2	0	0	2	2	2	1	NfeD-like	C-terminal,	partner-binding
Wzy_C	PF04932.15	gi|288559856|ref|YP_003423342.1|	-	0.11	12.2	3.5	0.14	11.8	3.5	1.1	1	0	0	1	1	1	0	O-Antigen	ligase
Phage_holin_3_6	PF07332.11	gi|288559856|ref|YP_003423342.1|	-	0.21	11.7	2.4	0.29	11.2	2.4	1.3	1	0	0	1	1	1	0	Putative	Actinobacterial	Holin-X,	holin	superfamily	III
BPD_transp_1	PF00528.22	gi|288559856|ref|YP_003423342.1|	-	0.22	11.2	9.5	0.28	10.9	9.5	1.1	1	0	0	1	1	1	0	Binding-protein-dependent	transport	system	inner	membrane	component
FtsX	PF02687.21	gi|288559856|ref|YP_003423342.1|	-	6.3	7.4	13.1	9.2	6.8	13.1	1.2	1	0	0	1	1	1	0	FtsX-like	permease	family
DEAD_assoc	PF08494.11	gi|288559857|ref|YP_003423343.1|	-	5.2e-48	163.4	0.0	8.1e-48	162.8	0.0	1.3	1	0	0	1	1	1	1	DEAD/H	associated
DEAD	PF00270.29	gi|288559857|ref|YP_003423343.1|	-	2.9e-30	105.3	0.1	6.9e-30	104.1	0.0	1.7	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.31	gi|288559857|ref|YP_003423343.1|	-	1.8e-17	63.7	0.2	1.1e-16	61.2	0.1	2.4	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.15	gi|288559857|ref|YP_003423343.1|	-	2.1e-10	40.9	0.5	8.2e-10	38.9	0.0	2.2	3	0	0	3	3	3	1	Type	III	restriction	enzyme,	res	subunit
T2SSE	PF00437.20	gi|288559857|ref|YP_003423343.1|	-	0.0047	16.0	0.0	0.0084	15.2	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
SNF2_N	PF00176.23	gi|288559857|ref|YP_003423343.1|	-	0.071	11.8	0.0	0.18	10.5	0.0	1.6	1	1	0	1	1	1	0	SNF2	family	N-terminal	domain
HEAT_2	PF13646.6	gi|288559858|ref|YP_003423344.1|	-	1.1e-33	115.5	6.9	1e-13	51.5	0.1	3.9	2	1	2	4	4	4	3	HEAT	repeats
HEAT_PBS	PF03130.16	gi|288559858|ref|YP_003423344.1|	-	2.1e-14	52.7	3.7	0.028	15.1	0.2	6.1	6	0	0	6	6	6	3	PBS	lyase	HEAT-like	repeat
HEAT	PF02985.22	gi|288559858|ref|YP_003423344.1|	-	3.2e-14	51.8	0.1	0.0086	16.3	0.0	4.3	4	0	0	4	4	4	3	HEAT	repeat
Cnd1	PF12717.7	gi|288559858|ref|YP_003423344.1|	-	1.2e-07	31.9	0.0	6.2e-05	23.1	0.0	2.9	1	1	1	2	2	2	2	non-SMC	mitotic	condensation	complex	subunit	1
Vac14_Fab1_bd	PF12755.7	gi|288559858|ref|YP_003423344.1|	-	8.8e-06	26.2	0.0	0.0012	19.4	0.0	3.1	2	1	2	4	4	4	1	Vacuolar	14	Fab1-binding	region
Arm	PF00514.23	gi|288559858|ref|YP_003423344.1|	-	0.00021	21.2	0.0	0.026	14.6	0.0	2.7	2	0	0	2	2	2	1	Armadillo/beta-catenin-like	repeat
API5	PF05918.11	gi|288559858|ref|YP_003423344.1|	-	0.00068	18.6	8.4	0.13	11.1	0.1	3.5	2	1	1	3	3	3	2	Apoptosis	inhibitory	protein	5	(API5)
HEAT_EZ	PF13513.6	gi|288559858|ref|YP_003423344.1|	-	0.0013	19.1	0.1	26	5.4	0.0	3.6	3	0	0	3	3	3	0	HEAT-like	repeat
Vitellogenin_N	PF01347.22	gi|288559858|ref|YP_003423344.1|	-	0.017	13.5	0.0	0.1	10.9	0.0	2.0	2	0	0	2	2	2	0	Lipoprotein	amino	terminal	region
Cohesin_HEAT	PF12765.7	gi|288559858|ref|YP_003423344.1|	-	0.1	12.9	1.0	6.1	7.2	0.0	3.2	3	0	0	3	3	3	0	HEAT	repeat	associated	with	sister	chromatid	cohesion
CN_hydrolase	PF00795.22	gi|288559860|ref|YP_003423346.1|	-	5.1e-65	219.4	0.0	5.7e-65	219.2	0.0	1.0	1	0	0	1	1	1	1	Carbon-nitrogen	hydrolase
zinc_ribbon_2	PF13240.6	gi|288559861|ref|YP_003423347.1|	-	0.00073	19.2	3.9	0.0016	18.1	3.9	1.6	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|288559861|ref|YP_003423347.1|	-	0.0011	18.3	3.3	0.0019	17.5	3.3	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|288559861|ref|YP_003423347.1|	-	0.0094	16.0	1.6	0.018	15.0	1.6	1.4	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc-ribbon_6	PF10005.9	gi|288559861|ref|YP_003423347.1|	-	0.019	15.6	0.2	0.25	12.1	0.1	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF4064	PF13273.6	gi|288559861|ref|YP_003423347.1|	-	0.11	12.8	3.1	0.079	13.2	0.9	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4064)
DprA_WH	PF17782.1	gi|288559862|ref|YP_003423348.1|	-	0.12	12.6	0.0	0.22	11.6	0.0	1.4	1	0	0	1	1	1	0	DprA	winged	helix	domain
Tup_N	PF08581.10	gi|288559862|ref|YP_003423348.1|	-	0.36	11.2	6.6	14	6.1	0.6	3.3	3	1	0	3	3	3	0	Tup	N-terminal
DUF1945	PF09178.10	gi|288559862|ref|YP_003423348.1|	-	1	9.6	4.2	23	5.3	0.1	3.0	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF1945)
SIR2	PF02146.17	gi|288559863|ref|YP_003423349.1|	-	1.1e-46	158.9	0.0	1.5e-46	158.5	0.0	1.2	1	0	0	1	1	1	1	Sir2	family
Mntp	PF02659.15	gi|288559864|ref|YP_003423350.1|	-	2.8e-52	176.5	19.1	4.6e-52	175.8	10.6	2.0	1	1	1	2	2	2	2	Putative	manganese	efflux	pump
UL41A	PF17591.2	gi|288559864|ref|YP_003423350.1|	-	2.4	8.3	5.2	1.1	9.4	2.4	2.0	1	1	1	2	2	2	0	Herpesvirus	UL41A
NucS	PF01939.16	gi|288559865|ref|YP_003423351.1|	-	2.1e-82	275.9	0.2	2.6e-82	275.6	0.2	1.1	1	0	0	1	1	1	1	Endonuclease	NucS
PDDEXK_9	PF08011.11	gi|288559865|ref|YP_003423351.1|	-	0.02	14.8	0.1	0.045	13.7	0.1	1.5	1	0	0	1	1	1	0	PD-(D/E)XK	nuclease	superfamily
MatE	PF01554.18	gi|288559866|ref|YP_003423352.1|	-	9.2e-59	197.7	37.3	1.3e-29	103.0	18.9	2.4	2	0	0	2	2	2	2	MatE
Polysacc_synt_C	PF14667.6	gi|288559866|ref|YP_003423352.1|	-	1e-05	25.7	11.3	1e-05	25.7	11.3	4.8	1	1	3	4	4	4	2	Polysaccharide	biosynthesis	C-terminal	domain
DUF3675	PF12428.8	gi|288559866|ref|YP_003423352.1|	-	0.049	14.2	0.6	0.12	12.9	0.6	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3675)
Amidohydro_2	PF04909.14	gi|288559867|ref|YP_003423353.1|	-	2.6e-31	109.5	0.0	3.1e-31	109.3	0.0	1.1	1	0	0	1	1	1	1	Amidohydrolase
Metallophos_2	PF12850.7	gi|288559867|ref|YP_003423353.1|	-	0.0047	17.1	0.0	0.022	14.9	0.0	2.1	2	1	0	2	2	2	1	Calcineurin-like	phosphoesterase	superfamily	domain
Abhydrolase_1	PF00561.20	gi|288559868|ref|YP_003423354.1|	-	1.5e-19	70.7	0.0	2e-19	70.3	0.0	1.1	1	0	0	1	1	1	1	alpha/beta	hydrolase	fold
Hydrolase_4	PF12146.8	gi|288559868|ref|YP_003423354.1|	-	0.0072	15.6	0.0	0.014	14.7	0.0	1.5	1	1	0	1	1	1	1	Serine	aminopeptidase,	S33
Esterase	PF00756.20	gi|288559868|ref|YP_003423354.1|	-	0.028	14.1	0.0	0.044	13.4	0.0	1.2	1	0	0	1	1	1	0	Putative	esterase
Acetyltransf_10	PF13673.7	gi|288559869|ref|YP_003423355.1|	-	1.9e-14	53.7	0.0	2.3e-14	53.4	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.7	gi|288559869|ref|YP_003423355.1|	-	2.9e-13	50.0	0.2	3.8e-13	49.6	0.2	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.25	gi|288559869|ref|YP_003423355.1|	-	9.8e-13	48.4	0.0	1.2e-12	48.1	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_9	PF13527.7	gi|288559869|ref|YP_003423355.1|	-	3.7e-07	30.3	0.1	2.5e-06	27.6	0.1	1.9	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.6	gi|288559869|ref|YP_003423355.1|	-	0.0016	18.5	0.0	0.0025	17.9	0.0	1.3	1	0	0	1	1	1	1	GCN5-related	N-acetyl-transferase
Acetyltransf_15	PF17013.5	gi|288559869|ref|YP_003423355.1|	-	0.0034	16.9	0.2	0.006	16.1	0.2	1.5	1	1	0	1	1	1	1	Putative	acetyl-transferase
FR47	PF08445.10	gi|288559869|ref|YP_003423355.1|	-	0.0065	16.4	0.0	0.012	15.6	0.0	1.4	1	1	0	1	1	1	1	FR47-like	protein
Acetyltransf_3	PF13302.7	gi|288559869|ref|YP_003423355.1|	-	0.028	15.1	0.0	0.032	14.9	0.0	1.3	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
DUF4231	PF14015.6	gi|288559871|ref|YP_003423357.1|	-	9.3e-05	22.9	1.5	0.0043	17.5	0.2	2.4	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF4231)
DUF2157	PF09925.9	gi|288559871|ref|YP_003423357.1|	-	0.014	15.2	0.2	0.024	14.4	0.2	1.6	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2157)
DUF3522	PF12036.8	gi|288559871|ref|YP_003423357.1|	-	0.016	15.5	2.2	0.023	15.0	0.3	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3522)
ETRAMP	PF09716.10	gi|288559871|ref|YP_003423357.1|	-	0.096	12.8	0.0	0.64	10.1	0.0	2.2	2	1	0	2	2	2	0	Malarial	early	transcribed	membrane	protein	(ETRAMP)
DUF4131	PF13567.6	gi|288559871|ref|YP_003423357.1|	-	0.12	12.0	0.8	2	8.0	0.6	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4131)
MgtE	PF01769.16	gi|288559871|ref|YP_003423357.1|	-	0.38	11.1	5.6	1.8	8.9	1.4	2.1	2	0	0	2	2	2	0	Divalent	cation	transporter
NadA	PF02445.16	gi|288559872|ref|YP_003423358.1|	-	1.1e-109	366.3	0.3	1.2e-109	366.1	0.3	1.0	1	0	0	1	1	1	1	Quinolinate	synthetase	A	protein
Asparaginase	PF00710.20	gi|288559872|ref|YP_003423358.1|	-	0.0083	15.7	0.0	0.073	12.6	0.0	2.1	2	0	0	2	2	2	1	Asparaginase,	N-terminal
XPG_I	PF00867.18	gi|288559872|ref|YP_003423358.1|	-	0.15	12.5	0.5	0.4	11.1	0.0	2.1	2	1	0	2	2	2	0	XPG	I-region
MS_channel	PF00924.18	gi|288559873|ref|YP_003423359.1|	-	1.3e-37	129.4	1.9	1.3e-37	129.4	1.9	1.7	2	0	0	2	2	2	1	Mechanosensitive	ion	channel
Lactamase_B_2	PF12706.7	gi|288559874|ref|YP_003423360.1|	-	3.7e-20	72.3	0.0	7.3e-11	42.0	0.0	2.1	2	0	0	2	2	2	2	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|288559874|ref|YP_003423360.1|	-	3.4e-13	50.1	1.6	1.6e-12	47.8	1.6	2.0	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_4	PF13691.6	gi|288559874|ref|YP_003423360.1|	-	3.6e-08	33.0	0.0	6.6e-08	32.1	0.0	1.4	1	0	0	1	1	1	1	tRNase	Z	endonuclease
NusG_add	PF18298.1	gi|288559874|ref|YP_003423360.1|	-	0.081	13.1	0.3	0.2	11.9	0.3	1.6	1	0	0	1	1	1	0	NusG	additional	domain
QRPTase_C	PF01729.19	gi|288559875|ref|YP_003423361.1|	-	2.6e-56	190.0	0.7	3.3e-56	189.7	0.7	1.1	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
QRPTase_N	PF02749.16	gi|288559875|ref|YP_003423361.1|	-	2.3e-29	101.3	0.0	6.6e-29	99.8	0.0	1.8	2	0	0	2	2	2	1	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
KDGP_aldolase	PF07071.11	gi|288559875|ref|YP_003423361.1|	-	0.0082	16.0	0.7	0.049	13.4	0.2	2.1	1	1	1	2	2	2	1	KDGP	aldolase
Biotin_lipoyl_2	PF13533.6	gi|288559875|ref|YP_003423361.1|	-	0.031	14.1	0.2	0.083	12.7	0.2	1.7	1	0	0	1	1	1	0	Biotin-lipoyl	like
Biotin_lipoyl	PF00364.22	gi|288559875|ref|YP_003423361.1|	-	0.071	13.0	1.1	0.37	10.6	0.0	2.5	3	0	0	3	3	3	0	Biotin-requiring	enzyme
SNF2_N	PF00176.23	gi|288559877|ref|YP_003423363.1|	-	1.7e-50	171.7	0.0	2.9e-50	171.0	0.0	1.3	1	0	0	1	1	1	1	SNF2	family	N-terminal	domain
Helicase_C	PF00271.31	gi|288559877|ref|YP_003423363.1|	-	4.4e-19	68.9	0.1	1.3e-18	67.3	0.1	1.9	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
ERCC3_RAD25_C	PF16203.5	gi|288559877|ref|YP_003423363.1|	-	0.0082	15.4	0.1	0.016	14.4	0.1	1.4	1	0	0	1	1	1	1	ERCC3/RAD25/XPB	C-terminal	helicase
SWI2_SNF2	PF18766.1	gi|288559877|ref|YP_003423363.1|	-	0.034	13.8	0.0	0.088	12.5	0.0	1.7	1	0	0	1	1	1	0	SWI2/SNF2	ATPase
CBFD_NFYB_HMF	PF00808.23	gi|288559878|ref|YP_003423364.1|	-	0.0023	18.2	0.7	0.015	15.6	0.1	2.4	3	0	0	3	3	3	1	Histone-like	transcription	factor	(CBF/NF-Y)	and	archaeal	histone
TUG-UBL1	PF11470.8	gi|288559878|ref|YP_003423364.1|	-	0.046	13.9	0.0	0.076	13.2	0.0	1.4	1	0	0	1	1	1	0	TUG	ubiquitin-like	domain
Histone	PF00125.24	gi|288559878|ref|YP_003423364.1|	-	0.051	13.9	0.3	0.073	13.4	0.3	1.2	1	0	0	1	1	1	0	Core	histone	H2A/H2B/H3/H4
AEP1	PF17049.5	gi|288559879|ref|YP_003423365.1|	-	0.017	14.2	0.3	0.022	13.8	0.3	1.1	1	0	0	1	1	1	0	ATPase	expression	protein	1
DDE_Tnp_1	PF01609.21	gi|288559880|ref|YP_003423366.1|	-	2.5e-10	40.4	0.0	4.3e-10	39.6	0.0	1.4	1	0	0	1	1	1	1	Transposase	DDE	domain
Skp1	PF01466.19	gi|288559880|ref|YP_003423366.1|	-	0.034	14.2	0.1	0.092	12.9	0.1	1.7	1	0	0	1	1	1	0	Skp1	family,	dimerisation	domain
UxaC	PF02614.14	gi|288559880|ref|YP_003423366.1|	-	0.035	13.0	0.1	0.05	12.5	0.1	1.2	1	0	0	1	1	1	0	Glucuronate	isomerase
Staphylokinase	PF02821.16	gi|288559880|ref|YP_003423366.1|	-	0.037	14.5	3.8	0.68	10.4	0.1	2.6	1	1	1	2	2	2	0	Staphylokinase/Streptokinase	family
Polysacc_deac_3	PF15421.6	gi|288559883|ref|YP_003423369.1|	-	0.0074	14.8	0.3	0.0083	14.7	0.3	1.3	1	0	0	1	1	1	1	Putative	polysaccharide	deacetylase
AbiJ_NTD4	PF18863.1	gi|288559883|ref|YP_003423369.1|	-	0.072	13.6	6.4	0.15	12.5	6.4	1.5	1	1	0	1	1	1	0	AbiJ	N-terminal	domain	4
zf-ZPR1	PF03367.13	gi|288559884|ref|YP_003423370.1|	-	1.9e-33	115.6	0.2	2.3e-33	115.3	0.2	1.1	1	0	0	1	1	1	1	ZPR1	zinc-finger	domain
Lar_restr_allev	PF14354.6	gi|288559884|ref|YP_003423370.1|	-	0.00039	20.7	0.3	0.00076	19.8	0.3	1.4	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
CpXC	PF14353.6	gi|288559884|ref|YP_003423370.1|	-	0.028	14.5	0.8	1.7	8.7	1.0	2.4	1	1	1	2	2	2	0	CpXC	protein
TFIIS_C	PF01096.18	gi|288559884|ref|YP_003423370.1|	-	0.04	13.8	1.0	1.9	8.4	0.1	2.3	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
DnaJ_CXXCXGXG	PF00684.19	gi|288559884|ref|YP_003423370.1|	-	0.085	13.2	0.8	0.16	12.4	0.8	1.4	1	0	0	1	1	1	0	DnaJ	central	domain
DUF2072	PF09845.9	gi|288559884|ref|YP_003423370.1|	-	0.13	12.5	1.7	0.3	11.4	1.6	1.9	1	1	0	1	1	1	0	Zn-ribbon	containing	protein
3H	PF02829.14	gi|288559885|ref|YP_003423371.1|	-	2.6e-16	59.7	1.7	5.1e-16	58.8	0.1	2.2	2	0	0	2	2	2	1	3H	domain
AAA_18	PF13238.6	gi|288559885|ref|YP_003423371.1|	-	9e-07	29.5	0.1	2.2e-06	28.2	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_17	PF13207.6	gi|288559885|ref|YP_003423371.1|	-	3.7e-05	24.2	0.5	0.00038	20.9	0.2	2.7	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.6	gi|288559885|ref|YP_003423371.1|	-	0.0032	17.6	0.0	0.031	14.4	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_28	PF13521.6	gi|288559885|ref|YP_003423371.1|	-	0.0042	17.3	0.1	0.011	16.0	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
Zeta_toxin	PF06414.12	gi|288559885|ref|YP_003423371.1|	-	0.0078	15.5	0.3	0.14	11.4	0.0	2.4	1	1	1	2	2	2	1	Zeta	toxin
CbiA	PF01656.23	gi|288559885|ref|YP_003423371.1|	-	0.011	15.7	0.5	0.12	12.4	0.2	2.3	2	1	0	2	2	2	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Thymidylate_kin	PF02223.17	gi|288559885|ref|YP_003423371.1|	-	0.019	14.6	5.3	0.65	9.7	0.4	3.0	4	0	0	4	4	4	0	Thymidylate	kinase
DUF2433	PF10360.9	gi|288559885|ref|YP_003423371.1|	-	0.032	14.3	0.7	0.11	12.6	0.1	2.2	2	1	0	3	3	3	0	Protein	of	unknown	function	(DUF2433)
AAA_24	PF13479.6	gi|288559885|ref|YP_003423371.1|	-	0.045	13.5	0.1	0.22	11.2	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
AAA_16	PF13191.6	gi|288559885|ref|YP_003423371.1|	-	0.046	14.1	0.0	0.074	13.4	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
ADK	PF00406.22	gi|288559885|ref|YP_003423371.1|	-	0.052	13.6	0.5	0.21	11.7	0.0	2.1	2	1	0	2	2	2	0	Adenylate	kinase
SKI	PF01202.22	gi|288559885|ref|YP_003423371.1|	-	0.055	13.6	0.3	0.49	10.5	0.0	2.5	2	2	0	2	2	2	0	Shikimate	kinase
Cytidylate_kin	PF02224.18	gi|288559885|ref|YP_003423371.1|	-	0.057	13.1	0.0	0.1	12.3	0.0	1.6	1	0	0	1	1	1	0	Cytidylate	kinase
PRK	PF00485.18	gi|288559885|ref|YP_003423371.1|	-	0.073	12.8	1.3	0.11	12.2	0.2	2.0	2	1	0	2	2	2	0	Phosphoribulokinase	/	Uridine	kinase	family
RsgA_GTPase	PF03193.16	gi|288559885|ref|YP_003423371.1|	-	0.076	12.9	0.2	3.9	7.4	0.0	2.5	2	0	0	2	2	2	0	RsgA	GTPase
RNA_helicase	PF00910.22	gi|288559885|ref|YP_003423371.1|	-	0.079	13.4	0.0	0.21	12.0	0.0	1.8	1	0	0	1	1	1	0	RNA	helicase
AAA_26	PF13500.6	gi|288559885|ref|YP_003423371.1|	-	0.1	12.4	0.0	0.22	11.3	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
ParA	PF10609.9	gi|288559885|ref|YP_003423371.1|	-	0.2	11.0	0.4	0.4	10.1	0.1	1.5	2	0	0	2	2	2	0	NUBPL	iron-transfer	P-loop	NTPase
DUF1611	PF07755.11	gi|288559886|ref|YP_003423372.1|	-	1.1e-51	175.0	0.0	1.5e-51	174.5	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1611_C)	P-loop	domain
DUF1611_N	PF17396.2	gi|288559886|ref|YP_003423372.1|	-	5e-08	33.1	0.0	1.7e-07	31.4	0.0	1.9	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1611_N)	Rossmann-like	domain
GFO_IDH_MocA	PF01408.22	gi|288559886|ref|YP_003423372.1|	-	0.00051	20.9	0.1	0.015	16.1	0.0	2.9	2	1	1	3	3	3	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
CoA_binding	PF02629.19	gi|288559886|ref|YP_003423372.1|	-	0.0031	18.1	0.0	0.01	16.5	0.0	1.8	1	0	0	1	1	1	1	CoA	binding	domain
PglD_N	PF17836.1	gi|288559886|ref|YP_003423372.1|	-	0.038	14.6	0.2	0.11	13.2	0.2	1.8	1	1	0	1	1	1	0	PglD	N-terminal	domain
Ecm33	PF12454.8	gi|288559886|ref|YP_003423372.1|	-	0.77	10.0	0.1	0.77	10.0	0.1	2.5	3	0	0	3	3	3	0	GPI-anchored	cell	wall	organization	protein
CLZ	PF16526.5	gi|288559888|ref|YP_003423374.1|	-	0.00019	21.7	2.9	0.00019	21.7	2.9	1.7	2	1	0	2	2	2	1	C-terminal	leucine	zipper	domain	of	cyclic	nucleotide-gated	channels
UPF0242	PF06785.11	gi|288559888|ref|YP_003423374.1|	-	0.0011	19.1	7.3	0.0015	18.6	7.3	1.2	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0242)	N-terminus
Phage_holin_2_3	PF16080.5	gi|288559888|ref|YP_003423374.1|	-	0.021	14.6	1.0	0.037	13.8	1.0	1.3	1	0	0	1	1	1	0	Bacteriophage	holin	family	HP1
LSDAT_euk	PF18139.1	gi|288559888|ref|YP_003423374.1|	-	0.04	13.3	0.4	0.047	13.1	0.4	1.1	1	0	0	1	1	1	0	SLOG	in	TRPM
Phage_holin_2_1	PF04971.12	gi|288559888|ref|YP_003423374.1|	-	0.093	12.7	0.2	0.16	12.0	0.2	1.3	1	0	0	1	1	1	0	Bacteriophage	P21	holin	S
ABC_tran_CTD	PF16326.5	gi|288559888|ref|YP_003423374.1|	-	0.12	12.6	7.1	0.071	13.4	2.3	2.2	1	1	1	2	2	2	0	ABC	transporter	C-terminal	domain
Tropomyosin_1	PF12718.7	gi|288559888|ref|YP_003423374.1|	-	0.13	12.5	9.8	0.38	10.9	9.8	1.6	1	1	0	1	1	1	0	Tropomyosin	like
MtrG	PF04210.13	gi|288559888|ref|YP_003423374.1|	-	0.22	11.4	6.6	3	7.8	0.6	2.5	1	1	1	2	2	2	0	Tetrahydromethanopterin	S-methyltransferase,	subunit	G
DUF2730	PF10805.8	gi|288559888|ref|YP_003423374.1|	-	0.31	11.1	5.6	0.33	11.1	2.3	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2730)
DUF16	PF01519.16	gi|288559888|ref|YP_003423374.1|	-	0.48	10.9	8.5	50	4.5	1.1	2.0	1	1	0	1	1	1	0	Protein	of	unknown	function	DUF16
XhlA	PF10779.9	gi|288559888|ref|YP_003423374.1|	-	0.66	10.2	13.7	0.17	12.1	5.3	2.7	2	2	0	2	2	2	0	Haemolysin	XhlA
IFP_35_N	PF07334.13	gi|288559888|ref|YP_003423374.1|	-	2.8	8.1	8.2	0.22	11.6	1.5	2.3	2	1	0	2	2	2	0	Interferon-induced	35	kDa	protein	(IFP	35)	N-terminus
Acetyltransf_3	PF13302.7	gi|288559890|ref|YP_003423376.1|	-	5.9e-11	43.2	0.0	7e-11	43.0	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.25	gi|288559890|ref|YP_003423376.1|	-	1.5e-09	38.1	0.1	2.9e-09	37.2	0.1	1.4	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_9	PF13527.7	gi|288559890|ref|YP_003423376.1|	-	0.0012	18.9	0.0	0.003	17.6	0.0	1.8	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.6	gi|288559890|ref|YP_003423376.1|	-	0.0038	16.9	0.0	0.0053	16.5	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.7	gi|288559890|ref|YP_003423376.1|	-	0.011	16.2	0.0	0.015	15.7	0.0	1.5	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.7	gi|288559890|ref|YP_003423376.1|	-	0.021	14.7	0.0	0.035	14.1	0.0	1.4	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
DUF4013	PF13197.6	gi|288559891|ref|YP_003423377.1|	-	9.5e-18	64.6	13.9	2e-17	63.6	13.9	1.5	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF4013)
DUF4179	PF13786.6	gi|288559891|ref|YP_003423377.1|	-	0.15	12.6	1.7	0.4	11.2	0.1	2.3	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4179)
DUF373	PF04123.13	gi|288559891|ref|YP_003423377.1|	-	0.62	9.4	9.2	1.1	8.6	8.4	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF373)
SVM_signal	PF12113.8	gi|288559891|ref|YP_003423377.1|	-	6.3	6.8	9.9	0.2	11.6	2.8	2.2	2	0	0	2	2	2	0	SVM	protein	signal	sequence
PK	PF00224.21	gi|288559892|ref|YP_003423378.1|	-	1.9e-110	369.0	9.0	2.9e-110	368.4	9.0	1.2	1	0	0	1	1	1	1	Pyruvate	kinase,	barrel	domain
PK_C	PF02887.16	gi|288559892|ref|YP_003423378.1|	-	6.8e-25	87.6	0.1	2.2e-24	86.0	0.0	1.9	2	0	0	2	2	2	1	Pyruvate	kinase,	alpha/beta	domain
HpcH_HpaI	PF03328.14	gi|288559892|ref|YP_003423378.1|	-	0.00017	20.8	0.1	0.00042	19.5	0.1	1.7	1	1	0	1	1	1	1	HpcH/HpaI	aldolase/citrate	lyase	family
IMPDH	PF00478.25	gi|288559892|ref|YP_003423378.1|	-	0.085	11.8	1.0	0.16	10.9	0.3	1.9	2	0	0	2	2	2	0	IMP	dehydrogenase	/	GMP	reductase	domain
Tannase	PF07519.11	gi|288559892|ref|YP_003423378.1|	-	0.15	10.9	0.0	0.36	9.7	0.0	1.6	1	0	0	1	1	1	0	Tannase	and	feruloyl	esterase
SNF	PF00209.18	gi|288559893|ref|YP_003423379.1|	-	4.2e-78	263.3	56.7	3e-49	168.1	32.1	2.0	1	1	1	2	2	2	2	Sodium:neurotransmitter	symporter	family
Methyltransf_11	PF08241.12	gi|288559894|ref|YP_003423380.1|	-	1.9e-16	60.5	0.0	2.7e-16	60.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|288559894|ref|YP_003423380.1|	-	1.6e-15	57.5	0.0	2.6e-15	56.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|288559894|ref|YP_003423380.1|	-	5.7e-14	52.2	0.0	8.8e-14	51.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|288559894|ref|YP_003423380.1|	-	1.2e-09	38.8	0.0	2.1e-09	38.0	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|288559894|ref|YP_003423380.1|	-	3.5e-08	33.5	0.0	6e-08	32.7	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|288559894|ref|YP_003423380.1|	-	1.5e-06	27.7	0.1	5e-06	26.0	0.1	1.7	1	1	1	2	2	2	1	ubiE/COQ5	methyltransferase	family
Methyltransf_8	PF05148.15	gi|288559894|ref|YP_003423380.1|	-	0.00022	21.1	0.1	0.00058	19.8	0.1	1.9	1	1	0	1	1	1	1	Hypothetical	methyltransferase
Methyltransf_2	PF00891.18	gi|288559894|ref|YP_003423380.1|	-	0.0021	17.4	0.0	0.0028	17.0	0.0	1.2	1	0	0	1	1	1	1	O-methyltransferase	domain
CMAS	PF02353.20	gi|288559894|ref|YP_003423380.1|	-	0.016	14.5	0.0	0.021	14.1	0.0	1.2	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
TehB	PF03848.14	gi|288559894|ref|YP_003423380.1|	-	0.047	13.1	0.1	0.059	12.8	0.1	1.2	1	0	0	1	1	1	0	Tellurite	resistance	protein	TehB
Methyltransf_9	PF08003.11	gi|288559894|ref|YP_003423380.1|	-	0.06	12.3	0.0	0.083	11.8	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1698)
MTS	PF05175.14	gi|288559894|ref|YP_003423380.1|	-	0.12	11.9	0.4	0.33	10.5	0.1	1.8	3	0	0	3	3	3	0	Methyltransferase	small	domain
PrmA	PF06325.13	gi|288559894|ref|YP_003423380.1|	-	0.12	11.7	0.1	0.22	10.9	0.1	1.4	1	1	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
DUF4065	PF13274.6	gi|288559895|ref|YP_003423381.1|	-	2e-15	57.7	0.2	3.2e-15	57.0	0.2	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4065)
DUF3795	PF12675.7	gi|288559899|ref|YP_003423385.1|	-	6.7e-18	64.9	9.7	7.9e-18	64.7	9.7	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3795)
SCAPER_N	PF16501.5	gi|288559899|ref|YP_003423385.1|	-	0.035	14.1	0.4	0.054	13.5	0.4	1.3	1	0	0	1	1	1	0	S	phase	cyclin	A-associated	protein	in	the	endoplasmic	reticulum
DUF2225	PF09986.9	gi|288559901|ref|YP_003423387.1|	-	2.1e-06	27.6	3.8	3.1e-06	27.1	3.8	1.3	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2225)
DUF2072	PF09845.9	gi|288559901|ref|YP_003423387.1|	-	0.11	12.8	2.4	0.17	12.2	2.4	1.6	1	1	0	1	1	1	0	Zn-ribbon	containing	protein
TetR_N	PF00440.23	gi|288559902|ref|YP_003423388.1|	-	6.4e-15	54.7	0.0	1.2e-14	53.8	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	tetR	family
UPF0122	PF04297.14	gi|288559902|ref|YP_003423388.1|	-	0.0011	19.1	0.3	0.0025	18.0	0.3	1.6	1	0	0	1	1	1	1	Putative	helix-turn-helix	protein,	YlxM	/	p13	like
HTH_40	PF14493.6	gi|288559902|ref|YP_003423388.1|	-	0.0078	16.7	0.3	0.068	13.6	0.1	2.6	1	1	1	2	2	2	1	Helix-turn-helix	domain
HTH_Tnp_1_2	PF13022.6	gi|288559902|ref|YP_003423388.1|	-	0.016	15.3	0.0	0.033	14.3	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	of	insertion	element	transposase
Sigma70_r4_2	PF08281.12	gi|288559902|ref|YP_003423388.1|	-	0.017	14.8	0.1	0.028	14.1	0.1	1.4	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_10	PF04967.12	gi|288559902|ref|YP_003423388.1|	-	0.021	14.6	0.1	0.04	13.7	0.1	1.5	1	0	0	1	1	1	0	HTH	DNA	binding	domain
LexA_DNA_bind	PF01726.16	gi|288559902|ref|YP_003423388.1|	-	0.09	12.6	0.0	0.88	9.4	0.0	2.1	2	0	0	2	2	2	0	LexA	DNA	binding	domain
HTH_IclR	PF09339.10	gi|288559902|ref|YP_003423388.1|	-	0.095	12.5	0.0	0.18	11.6	0.0	1.4	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
Radical_SAM	PF04055.21	gi|288559903|ref|YP_003423389.1|	-	3.7e-10	40.4	0.0	6.1e-09	36.5	0.0	2.1	1	1	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|288559903|ref|YP_003423389.1|	-	5.1e-09	36.3	0.0	1.3e-08	35.0	0.0	1.7	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.6	gi|288559903|ref|YP_003423389.1|	-	7.4e-07	29.5	0.0	1.3e-06	28.8	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
DRTGG	PF07085.12	gi|288559903|ref|YP_003423389.1|	-	0.023	14.5	0.0	0.25	11.1	0.0	2.3	1	1	1	2	2	2	0	DRTGG	domain
S-methyl_trans	PF02574.16	gi|288559903|ref|YP_003423389.1|	-	0.19	11.5	0.0	0.28	10.9	0.0	1.2	1	0	0	1	1	1	0	Homocysteine	S-methyltransferase
SepF	PF04472.12	gi|288559904|ref|YP_003423390.1|	-	2.1e-10	40.7	0.3	2.7e-10	40.4	0.3	1.1	1	0	0	1	1	1	1	Cell	division	protein	SepF
Pan3_PK	PF18101.1	gi|288559904|ref|YP_003423390.1|	-	0.052	13.5	0.3	0.83	9.6	0.3	2.1	1	1	0	1	1	1	0	Pan3	Pseudokinase	domain
TatD_DNase	PF01026.21	gi|288559905|ref|YP_003423391.1|	-	1.5e-24	86.8	0.1	1.8e-24	86.5	0.1	1.1	1	0	0	1	1	1	1	TatD	related	DNase
NTPase_1	PF03266.15	gi|288559905|ref|YP_003423391.1|	-	0.0041	17.0	2.6	0.0066	16.4	2.6	1.3	1	0	0	1	1	1	1	NTPase
Bac_DnaA	PF00308.18	gi|288559905|ref|YP_003423391.1|	-	0.13	12.1	3.1	3.2	7.5	0.0	2.2	1	1	0	2	2	2	0	Bacterial	dnaA	protein
DUF1724	PF08350.10	gi|288559906|ref|YP_003423392.1|	-	1.2e-13	50.9	0.4	2.5e-13	50.0	0.4	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1724)
HTH_45	PF14947.6	gi|288559906|ref|YP_003423392.1|	-	0.0027	17.6	1.0	0.0058	16.6	0.3	1.9	2	0	0	2	2	2	1	Winged	helix-turn-helix
HTH_34	PF13601.6	gi|288559906|ref|YP_003423392.1|	-	0.049	13.8	0.1	0.15	12.3	0.0	1.8	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
DUF1724	PF08350.10	gi|288559907|ref|YP_003423393.1|	-	5.1e-13	49.0	1.5	1.9e-12	47.1	1.5	2.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1724)
HGTP_anticodon	PF03129.20	gi|288559908|ref|YP_003423394.1|	-	7.1e-24	83.8	0.7	2.3e-23	82.2	0.7	1.9	1	0	0	1	1	1	1	Anticodon	binding	domain
tRNA-synt_2b	PF00587.25	gi|288559908|ref|YP_003423394.1|	-	4.7e-09	36.5	0.1	1e-08	35.3	0.1	1.9	1	1	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
zf-ribbon_3	PF13248.6	gi|288559908|ref|YP_003423394.1|	-	0.0038	16.6	1.7	0.17	11.3	0.1	2.4	2	0	0	2	2	2	2	zinc-ribbon	domain
Zn-ribbon_8	PF09723.10	gi|288559908|ref|YP_003423394.1|	-	0.061	13.5	4.3	1.7	8.9	4.3	2.4	1	1	0	1	1	1	0	Zinc	ribbon	domain
zf-C2HE	PF16278.5	gi|288559908|ref|YP_003423394.1|	-	0.15	12.5	1.1	1.3	9.5	0.1	2.8	2	0	0	2	2	2	0	C2HE	/	C2H2	/	C2HC	zinc-binding	finger
zf-ACC	PF17848.1	gi|288559908|ref|YP_003423394.1|	-	0.16	12.1	3.2	3.6	7.7	0.2	2.5	2	0	0	2	2	2	0	Acetyl-coA	carboxylase	zinc	finger	domain
DCD	PF06559.11	gi|288559909|ref|YP_003423395.1|	-	1.1e-19	70.5	0.0	5e-12	45.3	0.0	2.0	1	1	1	2	2	2	2	2'-deoxycytidine	5'-triphosphate	deaminase	(DCD)
dUTPase	PF00692.19	gi|288559909|ref|YP_003423395.1|	-	5.1e-15	55.3	0.0	7.6e-15	54.7	0.0	1.2	1	0	0	1	1	1	1	dUTPase
Fer4	PF00037.27	gi|288559910|ref|YP_003423396.1|	-	2.7e-07	30.1	2.5	2.7e-07	30.1	2.5	2.8	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|288559910|ref|YP_003423396.1|	-	6.5e-07	29.2	2.2	6.5e-07	29.2	2.2	2.9	3	0	0	3	3	3	1	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|288559910|ref|YP_003423396.1|	-	4.7e-05	23.9	23.6	0.00088	19.8	3.3	2.8	2	1	2	4	4	4	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|288559910|ref|YP_003423396.1|	-	0.00024	21.2	1.7	0.00024	21.2	1.7	3.1	2	1	1	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|288559910|ref|YP_003423396.1|	-	0.00052	20.0	1.9	0.00052	20.0	1.9	3.1	4	0	0	4	4	4	1	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|288559910|ref|YP_003423396.1|	-	0.0012	18.9	0.7	0.0012	18.9	0.7	3.1	3	1	0	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|288559910|ref|YP_003423396.1|	-	0.0034	17.5	11.6	0.0034	17.5	11.6	2.6	2	1	1	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|288559910|ref|YP_003423396.1|	-	0.0051	17.5	0.4	0.0051	17.5	0.4	2.8	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_16	PF13484.6	gi|288559910|ref|YP_003423396.1|	-	0.035	15.0	1.3	0.035	15.0	1.3	3.8	3	2	1	4	4	4	0	4Fe-4S	double	cluster	binding	domain
Fer4_8	PF13183.6	gi|288559910|ref|YP_003423396.1|	-	0.07	13.6	0.4	0.07	13.6	0.4	3.4	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
SpoU_methylase	PF00588.19	gi|288559911|ref|YP_003423397.1|	-	6.6e-33	113.9	0.0	9.9e-33	113.3	0.0	1.3	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
CCG	PF02754.16	gi|288559912|ref|YP_003423398.1|	-	1e-36	125.0	1.7	2.2e-17	63.0	0.2	2.8	2	0	0	2	2	2	2	Cysteine-rich	domain
Fer2_3	PF13085.6	gi|288559912|ref|YP_003423398.1|	-	4.3e-29	100.7	0.6	2.3e-28	98.4	0.0	2.5	3	0	0	3	3	3	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_8	PF13183.6	gi|288559912|ref|YP_003423398.1|	-	6.8e-12	45.7	2.2	6.8e-12	45.7	2.2	3.1	3	0	0	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|288559912|ref|YP_003423398.1|	-	4.6e-07	30.3	10.5	4.8e-07	30.2	4.7	3.6	3	1	1	4	4	4	2	4Fe-4S	dicluster	domain
Fer2	PF00111.27	gi|288559912|ref|YP_003423398.1|	-	3.8e-06	26.8	0.1	3.8e-06	26.8	0.1	3.7	3	1	1	4	4	4	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_10	PF13237.6	gi|288559912|ref|YP_003423398.1|	-	8.6e-06	25.8	7.4	8.6e-06	25.8	7.4	3.5	3	1	1	4	4	4	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|288559912|ref|YP_003423398.1|	-	4.4e-05	24.0	6.4	4.4e-05	24.0	6.4	3.7	3	1	1	4	4	4	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|288559912|ref|YP_003423398.1|	-	0.00031	20.9	17.2	0.017	15.3	0.1	4.2	5	0	0	5	5	4	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|288559912|ref|YP_003423398.1|	-	0.00064	19.9	7.1	0.16	12.2	1.1	3.5	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|288559912|ref|YP_003423398.1|	-	0.0023	18.4	9.4	0.33	11.5	0.1	3.3	3	0	0	3	3	3	2	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_2	PF12797.7	gi|288559912|ref|YP_003423398.1|	-	0.064	13.4	23.7	0.096	12.8	3.1	4.5	4	0	0	4	4	4	0	4Fe-4S	binding	domain
Fer2_4	PF13510.6	gi|288559912|ref|YP_003423398.1|	-	0.92	9.6	2.9	0.99	9.5	0.0	2.6	3	0	0	3	3	3	0	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_15	PF13459.6	gi|288559912|ref|YP_003423398.1|	-	1	10.2	4.7	8.7	7.2	0.1	3.3	3	0	0	3	3	3	0	4Fe-4S	single	cluster	domain
Fer4_21	PF14697.6	gi|288559912|ref|YP_003423398.1|	-	4.5	7.5	22.1	0.17	12.0	2.0	3.8	5	0	0	5	5	4	0	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|288559912|ref|YP_003423398.1|	-	5.1	8.1	24.5	1.3	10.0	4.6	4.5	5	1	0	5	5	4	0	4Fe-4S	double	cluster	binding	domain
TPP_enzyme_C	PF02775.21	gi|288559913|ref|YP_003423399.1|	-	7.2e-24	84.3	0.1	1.3e-23	83.5	0.1	1.5	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
POR_N	PF01855.19	gi|288559913|ref|YP_003423399.1|	-	2.5e-16	60.1	0.2	5e-16	59.2	0.2	1.5	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Fer4	PF00037.27	gi|288559913|ref|YP_003423399.1|	-	0.00016	21.3	4.6	0.00016	21.3	4.6	2.9	3	0	0	3	3	3	1	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|288559913|ref|YP_003423399.1|	-	0.00027	21.0	10.2	0.00027	21.0	10.2	1.9	2	0	0	2	2	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|288559913|ref|YP_003423399.1|	-	0.00098	19.1	3.8	0.00098	19.1	3.8	3.2	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|288559913|ref|YP_003423399.1|	-	0.0026	17.8	12.6	0.044	13.9	13.0	2.5	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|288559913|ref|YP_003423399.1|	-	0.0076	16.4	11.4	0.0076	16.4	11.4	2.1	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|288559913|ref|YP_003423399.1|	-	0.028	15.4	2.8	0.028	15.4	2.8	2.7	2	0	0	2	2	2	0	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.7	gi|288559913|ref|YP_003423399.1|	-	0.13	12.4	17.3	0.031	14.3	2.9	2.9	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|288559913|ref|YP_003423399.1|	-	1.2	9.8	17.1	4.6	7.9	13.5	2.7	2	1	0	2	2	1	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|288559913|ref|YP_003423399.1|	-	3.4	8.5	8.5	0.22	12.3	1.7	2.5	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.6	gi|288559913|ref|YP_003423399.1|	-	6.6	7.4	10.8	2.4	8.8	3.2	2.7	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
POR	PF01558.18	gi|288559914|ref|YP_003423400.1|	-	3.2e-34	118.5	0.1	3.8e-34	118.3	0.1	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
zf-ribbon_3	PF13248.6	gi|288559915|ref|YP_003423401.1|	-	1e-08	34.3	2.1	1.9e-08	33.4	2.1	1.5	1	0	0	1	1	1	1	zinc-ribbon	domain
zinc_ribbon_2	PF13240.6	gi|288559915|ref|YP_003423401.1|	-	0.00015	21.4	2.2	0.00015	21.4	2.2	1.8	2	0	0	2	2	2	1	zinc-ribbon	domain
DZR	PF12773.7	gi|288559915|ref|YP_003423401.1|	-	0.00039	20.4	0.3	0.00091	19.2	0.3	1.6	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_15	PF17032.5	gi|288559915|ref|YP_003423401.1|	-	0.0067	17.1	3.3	0.013	16.2	3.3	1.5	1	0	0	1	1	1	1	zinc-ribbon	family
RecR	PF02132.15	gi|288559915|ref|YP_003423401.1|	-	0.048	13.2	2.8	0.12	12.0	2.8	1.5	1	0	0	1	1	1	0	RecR	protein
HypA	PF01155.19	gi|288559915|ref|YP_003423401.1|	-	0.086	12.9	0.4	0.13	12.3	0.4	1.3	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
DNA_RNApol_7kD	PF03604.13	gi|288559915|ref|YP_003423401.1|	-	0.14	11.8	4.3	0.67	9.7	4.3	2.2	1	1	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
UPF0547	PF10571.9	gi|288559915|ref|YP_003423401.1|	-	0.17	12.0	2.4	0.34	11.0	2.4	1.5	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
PX	PF00787.24	gi|288559915|ref|YP_003423401.1|	-	0.2	11.7	1.1	0.36	10.8	1.1	1.7	1	1	0	1	1	1	0	PX	domain
Nudix_N_2	PF14803.6	gi|288559915|ref|YP_003423401.1|	-	0.51	10.3	6.1	1.1	9.2	3.2	2.8	2	1	0	2	2	2	0	Nudix	N-terminal
Auto_anti-p27	PF06677.12	gi|288559915|ref|YP_003423401.1|	-	1.1	9.4	4.9	7.4	6.8	3.5	2.8	2	1	1	3	3	3	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
ABC2_membrane_3	PF12698.7	gi|288559916|ref|YP_003423402.1|	-	2.8e-22	79.3	30.5	3.5e-12	46.1	20.5	2.2	2	0	0	2	2	2	2	ABC-2	family	transporter	protein
ABC2_membrane	PF01061.24	gi|288559916|ref|YP_003423402.1|	-	8.1e-09	35.2	16.1	8.1e-09	35.2	16.1	2.2	3	0	0	3	3	3	1	ABC-2	type	transporter
DUF3533	PF12051.8	gi|288559916|ref|YP_003423402.1|	-	3.1e-05	23.1	18.7	0.00028	19.9	0.3	2.4	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF3533)
Tet_res_leader	PF08050.12	gi|288559916|ref|YP_003423402.1|	-	0.0073	16.1	3.0	1.6	8.6	0.1	3.7	1	1	0	3	3	3	1	Tetracycline	resistance	leader	peptide
Orthoreo_P10	PF07204.11	gi|288559916|ref|YP_003423402.1|	-	0.16	11.9	0.1	0.16	11.9	0.1	3.1	3	0	0	3	3	3	0	Orthoreovirus	membrane	fusion	protein	p10
FliJ	PF02050.16	gi|288559916|ref|YP_003423402.1|	-	0.2	11.9	1.2	0.47	10.7	0.1	1.9	1	1	1	2	2	2	0	Flagellar	FliJ	protein
Big_3_5	PF16640.5	gi|288559916|ref|YP_003423402.1|	-	0.34	11.1	9.1	0.16	12.1	2.8	2.7	2	1	0	2	2	2	0	Bacterial	Ig-like	domain	(group	3)
MCPsignal	PF00015.21	gi|288559916|ref|YP_003423402.1|	-	2.7	7.8	9.0	0.93	9.3	3.5	2.4	1	1	0	2	2	2	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
2TM	PF13239.6	gi|288559917|ref|YP_003423403.1|	-	9.2e-25	86.8	5.4	1e-24	86.6	5.4	1.0	1	0	0	1	1	1	1	2TM	domain
SLAC1	PF03595.17	gi|288559917|ref|YP_003423403.1|	-	0.0035	16.7	0.5	0.0036	16.6	0.5	1.0	1	0	0	1	1	1	1	Voltage-dependent	anion	channel
Herpes_LMP1	PF05297.11	gi|288559917|ref|YP_003423403.1|	-	0.04	13.1	3.2	0.046	12.9	3.2	1.0	1	0	0	1	1	1	0	Herpesvirus	latent	membrane	protein	1	(LMP1)
LytTR	PF04397.15	gi|288559919|ref|YP_003423405.1|	-	1.3e-22	79.8	1.7	2.2e-22	79.1	0.6	1.7	2	0	0	2	2	2	1	LytTr	DNA-binding	domain
Pox_F11	PF04943.12	gi|288559919|ref|YP_003423405.1|	-	0.012	14.7	0.2	0.014	14.5	0.2	1.2	1	0	0	1	1	1	0	Poxvirus	F11	protein
DHOR	PF06537.11	gi|288559919|ref|YP_003423405.1|	-	0.17	10.5	0.0	0.22	10.1	0.0	1.1	1	0	0	1	1	1	0	Di-haem	oxidoreductase,	putative	peroxidase
DUF3021	PF11457.8	gi|288559920|ref|YP_003423406.1|	-	3.4e-24	85.6	15.6	3.8e-24	85.5	15.6	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3021)
DUF962	PF06127.11	gi|288559920|ref|YP_003423406.1|	-	1.2	9.3	5.8	0.24	11.5	0.7	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF962)
Amidohydro_1	PF01979.20	gi|288559921|ref|YP_003423407.1|	-	6.3e-30	104.7	0.1	8e-30	104.3	0.1	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.11	gi|288559921|ref|YP_003423407.1|	-	0.00011	21.9	0.0	0.37	10.2	0.0	2.2	2	0	0	2	2	2	2	Amidohydrolase	family
A_deaminase	PF00962.22	gi|288559921|ref|YP_003423407.1|	-	0.0059	16.0	0.0	0.011	15.1	0.0	1.5	1	0	0	1	1	1	1	Adenosine/AMP	deaminase
PI3_PI4_kinase	PF00454.27	gi|288559921|ref|YP_003423407.1|	-	0.025	14.4	0.0	0.065	13.0	0.0	1.7	1	1	1	2	2	2	0	Phosphatidylinositol	3-	and	4-kinase
CBS	PF00571.28	gi|288559922|ref|YP_003423408.1|	-	1.4e-32	111.9	12.9	1.2e-11	44.8	1.3	4.1	4	0	0	4	4	4	4	CBS	domain
PRC	PF05239.16	gi|288559922|ref|YP_003423408.1|	-	0.033	14.3	1.8	2.6	8.2	0.2	3.3	3	0	0	3	3	3	0	PRC-barrel	domain
ThiI	PF02568.14	gi|288559923|ref|YP_003423409.1|	-	7.1e-05	22.5	0.0	0.0044	16.6	0.0	2.9	2	1	0	2	2	2	1	Thiamine	biosynthesis	protein	(ThiI)
ATP_bind_3	PF01171.20	gi|288559923|ref|YP_003423409.1|	-	0.00011	22.0	0.0	0.00028	20.7	0.0	1.7	1	1	0	1	1	1	1	PP-loop	family
QueC	PF06508.13	gi|288559923|ref|YP_003423409.1|	-	0.00031	20.3	0.0	0.0056	16.2	0.0	2.3	2	0	0	2	2	2	1	Queuosine	biosynthesis	protein	QueC
TBP	PF00352.21	gi|288559923|ref|YP_003423409.1|	-	0.0049	16.8	0.0	0.013	15.4	0.0	1.8	1	0	0	1	1	1	1	Transcription	factor	TFIID	(or	TATA-binding	protein,	TBP)
Asn_synthase	PF00733.21	gi|288559923|ref|YP_003423409.1|	-	0.025	14.3	0.0	0.047	13.4	0.0	1.4	1	0	0	1	1	1	0	Asparagine	synthase
TfuA	PF07812.12	gi|288559924|ref|YP_003423410.1|	-	1.9e-46	156.7	0.0	4.1e-46	155.6	0.0	1.5	2	0	0	2	2	2	1	TfuA-like	protein
YcaO	PF02624.16	gi|288559925|ref|YP_003423411.1|	-	8.4e-87	291.5	0.0	1.6e-86	290.5	0.0	1.4	2	0	0	2	2	2	1	YcaO	cyclodehydratase,	ATP-ad	Mg2+-binding
Peptidase_M24	PF00557.24	gi|288559926|ref|YP_003423412.1|	-	9.5e-55	185.5	0.0	1.6e-54	184.8	0.0	1.4	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.18	gi|288559926|ref|YP_003423412.1|	-	2.1e-11	44.6	0.0	3.2e-11	44.0	0.0	1.3	1	0	0	1	1	1	1	Creatinase/Prolidase	N-terminal	domain
T2SSF	PF00482.23	gi|288559927|ref|YP_003423413.1|	-	4.2e-24	84.9	1.4	4.2e-24	84.9	1.4	3.8	3	1	1	4	4	4	1	Type	II	secretion	system	(T2SS),	protein	F
DmpG_comm	PF07836.11	gi|288559927|ref|YP_003423413.1|	-	0.062	12.8	0.1	0.18	11.3	0.0	1.8	2	0	0	2	2	2	0	DmpG-like	communication	domain
DUF2207	PF09972.9	gi|288559927|ref|YP_003423413.1|	-	0.091	11.5	14.4	0.18	10.5	6.2	2.2	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2207)
DUF2070	PF09843.9	gi|288559927|ref|YP_003423413.1|	-	1.4	7.2	26.2	0.016	13.5	8.1	2.1	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2070)
Phage_holin_3_6	PF07332.11	gi|288559927|ref|YP_003423413.1|	-	8.8	6.4	19.6	0.42	10.6	2.3	2.8	2	1	1	3	3	3	0	Putative	Actinobacterial	Holin-X,	holin	superfamily	III
Class_IIIsignal	PF04021.12	gi|288559928|ref|YP_003423414.1|	-	3.2e-08	33.3	4.2	4.4e-08	32.8	4.2	1.2	1	0	0	1	1	1	1	Class	III	signal	peptide
PsbJ	PF01788.17	gi|288559928|ref|YP_003423414.1|	-	0.0012	18.6	1.7	0.0016	18.2	1.7	1.1	1	0	0	1	1	1	1	PsbJ
Flp1_like	PF16982.5	gi|288559928|ref|YP_003423414.1|	-	0.0043	16.4	1.3	0.0043	16.4	1.3	1.5	2	0	0	2	2	2	1	Putative	Flagellin,	Flp1-like,	domain
DUF515	PF04415.12	gi|288559928|ref|YP_003423414.1|	-	0.016	13.6	0.0	0.017	13.6	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF515)
Aldedh	PF00171.22	gi|288559929|ref|YP_003423415.1|	-	1.1e-159	531.8	0.1	1.4e-159	531.5	0.1	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
LuxC	PF05893.14	gi|288559929|ref|YP_003423415.1|	-	0.00012	21.3	0.0	0.00025	20.2	0.0	1.5	1	0	0	1	1	1	1	Acyl-CoA	reductase	(LuxC)
DUF3994	PF13159.6	gi|288559929|ref|YP_003423415.1|	-	0.011	16.3	0.0	0.032	14.8	0.0	1.8	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3994)
DUF3144	PF11342.8	gi|288559929|ref|YP_003423415.1|	-	2.5	8.5	5.2	27	5.1	0.0	3.1	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF3144)
Alpha_Helical	PF18489.1	gi|288559930|ref|YP_003423416.1|	-	2.8e-56	189.1	0.1	3.9e-56	188.7	0.1	1.2	1	0	0	1	1	1	1	Alpha	helical	domain
tRNA_bind	PF01588.20	gi|288559930|ref|YP_003423416.1|	-	5.6e-14	52.0	0.2	9.4e-14	51.3	0.2	1.4	1	0	0	1	1	1	1	Putative	tRNA	binding	domain
PRC	PF05239.16	gi|288559931|ref|YP_003423417.1|	-	2.4e-07	30.7	0.4	1.2e-06	28.5	0.4	1.8	1	1	0	1	1	1	1	PRC-barrel	domain
DUF108	PF01958.18	gi|288559932|ref|YP_003423418.1|	-	1.2e-29	102.4	0.3	2.4e-29	101.5	0.3	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF108
NAD_binding_3	PF03447.16	gi|288559932|ref|YP_003423418.1|	-	3.1e-19	69.7	0.5	6e-19	68.8	0.1	1.6	2	0	0	2	2	2	1	Homoserine	dehydrogenase,	NAD	binding	domain
DapB_N	PF01113.20	gi|288559932|ref|YP_003423418.1|	-	0.00085	19.4	0.9	0.0059	16.7	0.1	2.2	2	1	0	2	2	2	1	Dihydrodipicolinate	reductase,	N-terminus
F420_oxidored	PF03807.17	gi|288559932|ref|YP_003423418.1|	-	0.003	18.1	0.6	0.0069	16.9	0.1	2.0	2	1	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
GFO_IDH_MocA	PF01408.22	gi|288559932|ref|YP_003423418.1|	-	0.004	18.0	0.1	0.011	16.5	0.0	1.8	2	0	0	2	2	2	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
2-Hacid_dh_C	PF02826.19	gi|288559932|ref|YP_003423418.1|	-	0.079	12.3	0.0	0.13	11.6	0.0	1.4	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
DUF3804	PF12707.7	gi|288559932|ref|YP_003423418.1|	-	0.12	12.1	0.1	0.2	11.4	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3804)
Thg1	PF04446.12	gi|288559933|ref|YP_003423419.1|	-	2.7e-31	108.2	0.9	4.2e-31	107.6	0.9	1.3	1	0	0	1	1	1	1	tRNAHis	guanylyltransferase
Thg1C	PF14413.6	gi|288559933|ref|YP_003423419.1|	-	1e-07	32.2	0.7	1.5e-07	31.6	0.7	1.2	1	0	0	1	1	1	1	Thg1	C	terminal	domain
Prok-JAB	PF14464.6	gi|288559934|ref|YP_003423420.1|	-	3.6e-07	30.0	0.0	5.8e-07	29.3	0.0	1.3	1	0	0	1	1	1	1	Prokaryotic	homologs	of	the	JAB	domain
2-Hacid_dh_C	PF02826.19	gi|288559935|ref|YP_003423421.1|	-	7.6e-63	211.1	0.0	1.3e-62	210.3	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.30	gi|288559935|ref|YP_003423421.1|	-	1.3e-39	134.9	1.3	1.3e-39	134.9	1.3	1.8	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
ACT	PF01842.25	gi|288559935|ref|YP_003423421.1|	-	1.5e-08	34.2	0.3	1.8e-07	30.8	0.0	2.7	3	0	0	3	3	3	1	ACT	domain
NAD_binding_2	PF03446.15	gi|288559935|ref|YP_003423421.1|	-	7.5e-05	22.9	0.1	0.00023	21.4	0.0	1.9	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
GFO_IDH_MocA	PF01408.22	gi|288559935|ref|YP_003423421.1|	-	0.0009	20.1	0.0	0.0064	17.3	0.0	2.4	2	0	0	2	2	2	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
UDPG_MGDP_dh_C	PF03720.15	gi|288559935|ref|YP_003423421.1|	-	0.004	17.6	2.0	0.0069	16.8	0.0	2.4	4	0	0	4	4	4	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
YbjQ_1	PF01906.17	gi|288559936|ref|YP_003423422.1|	-	8.5e-34	116.3	0.1	9.3e-34	116.2	0.1	1.0	1	0	0	1	1	1	1	Putative	heavy-metal-binding
Flagellin_N	PF00669.20	gi|288559936|ref|YP_003423422.1|	-	0.038	14.1	0.0	0.052	13.7	0.0	1.2	1	0	0	1	1	1	0	Bacterial	flagellin	N-terminal	helical	region
Helicase_C_2	PF13307.6	gi|288559936|ref|YP_003423422.1|	-	0.15	12.2	0.0	0.19	11.9	0.0	1.1	1	0	0	1	1	1	0	Helicase	C-terminal	domain
FdhD-NarQ	PF02634.15	gi|288559938|ref|YP_003423424.1|	-	1.6e-59	201.4	0.0	1.9e-59	201.2	0.0	1.0	1	0	0	1	1	1	1	FdhD/NarQ	family
Pox_Ag35	PF03286.14	gi|288559938|ref|YP_003423424.1|	-	0.017	14.9	0.1	0.024	14.5	0.1	1.3	1	0	0	1	1	1	0	Pox	virus	Ag35	surface	protein
Peptidase_C41	PF05417.11	gi|288559938|ref|YP_003423424.1|	-	0.052	13.4	0.1	0.15	11.9	0.0	1.6	1	1	1	2	2	2	0	Hepatitis	E	cysteine	protease
BAR_2	PF10455.9	gi|288559938|ref|YP_003423424.1|	-	0.14	11.2	0.0	0.2	10.8	0.0	1.1	1	0	0	1	1	1	0	Bin/amphiphysin/Rvs	domain	for	vesicular	trafficking
DUF4133	PF13571.6	gi|288559940|ref|YP_003423426.1|	-	0.012	15.9	6.2	0.013	15.8	6.2	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4133)
YwiC	PF14256.6	gi|288559940|ref|YP_003423426.1|	-	0.024	14.9	1.3	0.026	14.9	1.3	1.0	1	0	0	1	1	1	0	YwiC-like	protein
DUF3784	PF12650.7	gi|288559940|ref|YP_003423426.1|	-	0.058	13.6	8.8	0.074	13.3	8.8	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3784)
FUSC_2	PF13515.6	gi|288559940|ref|YP_003423426.1|	-	0.063	13.4	4.5	0.071	13.2	4.5	1.0	1	0	0	1	1	1	0	Fusaric	acid	resistance	protein-like
DUF1435	PF07256.12	gi|288559940|ref|YP_003423426.1|	-	0.11	12.7	4.0	0.21	11.7	3.8	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1435)
Cyt_c_ox_IV	PF12270.8	gi|288559940|ref|YP_003423426.1|	-	0.13	12.4	2.7	0.14	12.3	2.7	1.0	1	0	0	1	1	1	0	Cytochrome	c	oxidase	subunit	IV
SPC12	PF06645.13	gi|288559940|ref|YP_003423426.1|	-	0.3	11.2	5.6	0.41	10.8	5.6	1.2	1	0	0	1	1	1	0	Microsomal	signal	peptidase	12	kDa	subunit	(SPC12)
DUF2207	PF09972.9	gi|288559940|ref|YP_003423426.1|	-	1.3	7.7	5.2	1.4	7.6	5.2	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
HTH_3	PF01381.22	gi|288559941|ref|YP_003423427.1|	-	5.4e-11	42.4	0.7	9.7e-11	41.6	0.1	1.8	2	0	0	2	2	2	1	Helix-turn-helix
HTH_19	PF12844.7	gi|288559941|ref|YP_003423427.1|	-	2.3e-08	33.9	0.1	5.9e-08	32.6	0.1	1.8	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_31	PF13560.6	gi|288559941|ref|YP_003423427.1|	-	3e-06	27.5	0.0	4.8e-06	26.8	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_26	PF13443.6	gi|288559941|ref|YP_003423427.1|	-	0.0094	16.4	0.4	0.021	15.3	0.0	1.8	2	0	0	2	2	2	1	Cro/C1-type	HTH	DNA-binding	domain
TetR_N	PF00440.23	gi|288559941|ref|YP_003423427.1|	-	0.057	13.2	0.0	0.16	11.8	0.0	1.8	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	tetR	family
PDZ_3	PF17815.1	gi|288559941|ref|YP_003423427.1|	-	0.083	12.7	2.5	0.15	11.9	0.7	2.1	1	1	1	2	2	2	0	PDZ	domain
HTH_11	PF08279.12	gi|288559941|ref|YP_003423427.1|	-	0.12	12.4	0.0	0.52	10.3	0.0	2.2	1	0	0	1	1	1	0	HTH	domain
DUF1743	PF08489.11	gi|288559942|ref|YP_003423428.1|	-	3.1e-37	127.2	0.0	5e-37	126.5	0.0	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1743)
tRNA_anti-codon	PF01336.25	gi|288559942|ref|YP_003423428.1|	-	1.6e-07	31.2	0.1	1.2e-06	28.4	0.1	2.4	1	1	1	2	2	2	1	OB-fold	nucleic	acid	binding	domain
tRNA_anti_2	PF13742.6	gi|288559942|ref|YP_003423428.1|	-	0.0022	18.2	0.0	0.0049	17.0	0.0	1.5	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
Zn_Tnp_IS1595	PF12760.7	gi|288559942|ref|YP_003423428.1|	-	4.6	7.3	5.3	3.9	7.5	2.5	2.2	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
DUF3100	PF11299.8	gi|288559943|ref|YP_003423429.1|	-	1.7e-85	286.2	14.7	1.7e-85	286.2	14.7	2.3	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF3100)
PAP2	PF01569.21	gi|288559943|ref|YP_003423429.1|	-	0.064	13.0	0.1	0.064	13.0	0.1	2.9	3	2	0	3	3	3	0	PAP2	superfamily
Beta_helix	PF13229.6	gi|288559944|ref|YP_003423430.1|	-	0.003	17.4	28.8	0.003	17.4	28.8	7.7	1	1	6	7	7	7	6	Right	handed	beta	helix	region
MmgE_PrpD	PF03972.14	gi|288559945|ref|YP_003423431.1|	-	5.3e-95	318.5	0.0	1.1e-94	317.5	0.0	1.4	1	1	0	1	1	1	1	MmgE/PrpD	family
Peptidase_U32	PF01136.19	gi|288559946|ref|YP_003423432.1|	-	0.0016	17.6	0.0	0.0026	16.9	0.0	1.3	1	0	0	1	1	1	1	Peptidase	family	U32
Amidohydro_2	PF04909.14	gi|288559946|ref|YP_003423432.1|	-	0.067	13.0	0.0	0.097	12.4	0.0	1.3	1	0	0	1	1	1	0	Amidohydrolase
Fumerase	PF05681.14	gi|288559947|ref|YP_003423433.1|	-	1.1e-58	198.8	0.0	1.3e-58	198.6	0.0	1.0	1	0	0	1	1	1	1	Fumarate	hydratase	(Fumerase)
Citrate_synt	PF00285.21	gi|288559948|ref|YP_003423434.1|	-	2.8e-45	155.0	0.0	5.3e-40	137.6	0.0	1.9	1	1	1	2	2	2	2	Citrate	synthase,	C-terminal	domain
Nitroreductase	PF00881.24	gi|288559949|ref|YP_003423435.1|	-	1.5e-27	96.7	0.0	6.4e-13	49.1	0.0	2.0	1	1	1	2	2	2	2	Nitroreductase	family
TM1586_NiRdase	PF14512.6	gi|288559949|ref|YP_003423435.1|	-	7.3e-14	51.8	0.0	4.9e-11	42.6	0.0	3.2	1	1	0	1	1	1	1	Putative	TM	nitroreductase
DUF202	PF02656.15	gi|288559951|ref|YP_003423437.1|	-	2.6	8.5	16.4	6.6	7.3	0.1	3.1	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF202)
V-ATPase_G_2	PF16999.5	gi|288559952|ref|YP_003423438.1|	-	1.2e-05	25.7	17.8	0.00017	21.9	17.6	1.9	1	1	0	1	1	1	1	Vacuolar	(H+)-ATPase	G	subunit
ATP-synt_B	PF00430.18	gi|288559952|ref|YP_003423438.1|	-	0.00033	20.7	20.4	0.036	14.1	11.3	2.0	1	1	1	2	2	2	2	ATP	synthase	B/B'	CF(0)
DivIVA	PF05103.13	gi|288559952|ref|YP_003423438.1|	-	0.00046	20.3	18.6	0.062	13.4	6.9	2.1	1	1	1	2	2	2	2	DivIVA	protein
V-ATPase_G	PF03179.15	gi|288559952|ref|YP_003423438.1|	-	0.0031	18.0	14.1	0.0041	17.6	14.1	1.1	1	0	0	1	1	1	1	Vacuolar	(H+)-ATPase	G	subunit
DUF3552	PF12072.8	gi|288559952|ref|YP_003423438.1|	-	0.0041	16.5	8.4	0.0041	16.5	8.4	2.1	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF3552)
Apolipoprotein	PF01442.18	gi|288559952|ref|YP_003423438.1|	-	0.0074	16.2	6.0	0.0088	15.9	6.0	1.0	1	0	0	1	1	1	1	Apolipoprotein	A1/A4/E	domain
DUF883	PF05957.13	gi|288559952|ref|YP_003423438.1|	-	0.022	15.3	10.3	0.063	13.9	6.0	2.0	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF883)
HrpE	PF06188.12	gi|288559952|ref|YP_003423438.1|	-	0.025	14.5	6.7	0.043	13.7	6.7	1.5	1	1	0	1	1	1	0	HrpE/YscL/FliH	and	V-type	ATPase	subunit	E
DUF2015	PF09435.10	gi|288559952|ref|YP_003423438.1|	-	0.05	13.5	1.2	0.054	13.4	1.2	1.2	1	0	0	1	1	1	0	Fungal	protein	of	unknown	function	(DUF2015)
GARP	PF16731.5	gi|288559952|ref|YP_003423438.1|	-	0.08	12.6	15.7	0.096	12.4	15.7	1.1	1	0	0	1	1	1	0	Glutamic	acid/alanine-rich	protein	of	Trypanosoma
Transposase_24	PF03004.14	gi|288559952|ref|YP_003423438.1|	-	0.21	11.7	3.7	0.27	11.3	3.7	1.2	1	0	0	1	1	1	0	Plant	transposase	(Ptta/En/Spm	family)
Phasin	PF05597.11	gi|288559952|ref|YP_003423438.1|	-	0.99	9.4	9.7	0.92	9.5	2.0	2.1	1	1	1	2	2	2	0	Poly(hydroxyalcanoate)	granule	associated	protein	(phasin)
SCAB_CC	PF16712.5	gi|288559952|ref|YP_003423438.1|	-	1.8	8.4	14.5	3.8	7.3	12.8	1.9	1	1	1	2	2	2	0	Coiled-coil	regions	of	plant-specific	actin-binding	protein
Med25_SD1	PF11235.8	gi|288559952|ref|YP_003423438.1|	-	2	8.8	4.6	2.6	8.3	3.6	1.7	1	1	1	2	2	2	0	Mediator	complex	subunit	25	synapsin	1
AIF-MLS	PF14962.6	gi|288559952|ref|YP_003423438.1|	-	3.3	7.6	12.0	3.7	7.5	12.0	1.1	1	0	0	1	1	1	0	Mitochondria	Localisation	Sequence
V_ATPase_I	PF01496.19	gi|288559953|ref|YP_003423439.1|	-	1.1e-26	93.1	8.8	2.3e-22	78.8	0.1	2.8	3	1	0	3	3	3	2	V-type	ATPase	116kDa	subunit	family
Sugarporin_N	PF11471.8	gi|288559953|ref|YP_003423439.1|	-	0.034	14.1	4.7	0.72	9.9	1.2	3.2	2	0	0	2	2	2	0	Maltoporin	periplasmic	N-terminal	extension
Flagellin_N	PF00669.20	gi|288559953|ref|YP_003423439.1|	-	0.12	12.5	0.7	0.36	10.9	0.7	1.7	1	0	0	1	1	1	0	Bacterial	flagellin	N-terminal	helical	region
APG6_N	PF17675.1	gi|288559953|ref|YP_003423439.1|	-	2.7	8.5	13.4	0.32	11.5	1.1	2.4	2	0	0	2	2	2	0	Apg6	coiled-coil	region
Bac_export_2	PF01312.19	gi|288559953|ref|YP_003423439.1|	-	8.2	5.5	10.5	0.66	9.1	3.7	2.0	2	0	0	2	2	2	0	FlhB	HrpN	YscU	SpaS	Family
ATP-synt_C	PF00137.21	gi|288559954|ref|YP_003423440.1|	-	2e-33	114.5	33.2	2.7e-17	62.9	11.4	2.8	2	1	1	3	3	3	2	ATP	synthase	subunit	C
SelB-wing_1	PF09105.10	gi|288559954|ref|YP_003423440.1|	-	6.5e-05	22.8	0.2	0.06	13.3	0.0	2.2	2	0	0	2	2	2	2	Elongation	factor	SelB,	winged	helix
UL2	PF08196.11	gi|288559954|ref|YP_003423440.1|	-	0.00028	20.8	0.7	0.13	12.2	0.1	2.2	2	0	0	2	2	2	2	UL2	protein
vATP-synt_E	PF01991.18	gi|288559955|ref|YP_003423441.1|	-	6.1e-42	143.3	17.3	6.4e-41	140.0	17.3	1.9	1	1	0	1	1	1	1	ATP	synthase	(E/31	kDa)	subunit
DivIVA	PF05103.13	gi|288559955|ref|YP_003423441.1|	-	3.9	7.6	14.2	9.1	6.4	5.3	2.6	1	1	1	2	2	2	0	DivIVA	protein
vATP-synt_AC39	PF01992.16	gi|288559956|ref|YP_003423442.1|	-	1.2e-71	241.9	0.7	1.4e-71	241.7	0.7	1.0	1	0	0	1	1	1	1	ATP	synthase	(C/AC39)	subunit
MerR-DNA-bind	PF09278.11	gi|288559956|ref|YP_003423442.1|	-	0.039	14.5	0.0	3	8.5	0.0	2.9	3	0	0	3	3	3	0	MerR,	DNA	binding
LapA_dom	PF06305.11	gi|288559956|ref|YP_003423442.1|	-	0.11	12.3	0.1	0.27	11.1	0.1	1.6	1	0	0	1	1	1	0	Lipopolysaccharide	assembly	protein	A	domain
ATP-synt_F	PF01990.17	gi|288559957|ref|YP_003423443.1|	-	1.5e-23	82.9	1.3	1.8e-23	82.6	1.3	1.1	1	0	0	1	1	1	1	ATP	synthase	(F/14-kDa)	subunit
ATP-synt_ab	PF00006.25	gi|288559958|ref|YP_003423444.1|	-	4.5e-90	301.0	0.0	8.6e-90	300.1	0.0	1.5	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_Xtn	PF16886.5	gi|288559958|ref|YP_003423444.1|	-	5e-47	158.7	1.7	8.2e-47	158.0	0.7	1.9	2	0	0	2	2	2	1	ATPsynthase	alpha/beta	subunit	N-term	extension
ATP-synt_ab_N	PF02874.23	gi|288559958|ref|YP_003423444.1|	-	3.3e-15	56.4	3.8	1.2e-14	54.6	3.8	2.1	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
AAA_22	PF13401.6	gi|288559958|ref|YP_003423444.1|	-	0.0057	16.9	0.0	0.013	15.7	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
Methyltrn_RNA_4	PF09936.9	gi|288559958|ref|YP_003423444.1|	-	0.04	13.8	0.1	0.089	12.6	0.1	1.5	1	0	0	1	1	1	0	SAM-dependent	RNA	methyltransferase
ATP-synt_ab	PF00006.25	gi|288559959|ref|YP_003423445.1|	-	9.3e-67	224.8	0.0	1.2e-66	224.4	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_N	PF02874.23	gi|288559959|ref|YP_003423445.1|	-	7.3e-14	52.0	3.9	1.7e-13	50.9	3.9	1.7	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
HAS-barrel	PF09378.10	gi|288559959|ref|YP_003423445.1|	-	0.00016	21.8	2.3	0.00051	20.1	2.3	1.9	1	0	0	1	1	1	1	HAS	barrel	domain
ATP-synt_D	PF01813.17	gi|288559960|ref|YP_003423446.1|	-	1.4e-62	211.1	10.2	1.7e-62	210.8	10.2	1.1	1	0	0	1	1	1	1	ATP	synthase	subunit	D
CDT1_C	PF16679.5	gi|288559960|ref|YP_003423446.1|	-	0.02	15.3	0.8	0.27	11.7	0.0	2.8	1	1	1	2	2	2	0	DNA	replication	factor	Cdt1	C-terminal	domain
Cas_DxTHG	PF09455.10	gi|288559960|ref|YP_003423446.1|	-	0.029	14.0	3.4	0.035	13.7	3.4	1.1	1	0	0	1	1	1	0	CRISPR-associated	(Cas)	DxTHG	family
CFAP91	PF14738.6	gi|288559960|ref|YP_003423446.1|	-	0.51	10.4	11.4	0.12	12.5	7.8	1.7	2	0	0	2	2	2	0	Cilia-	and	flagella-associated	protein	91
MotA_ExbB	PF01618.16	gi|288559962|ref|YP_003423448.1|	-	3.3e-11	43.0	0.0	5.2e-11	42.4	0.0	1.4	1	0	0	1	1	1	1	MotA/TolQ/ExbB	proton	channel	family
AICARFT_IMPCHas	PF01808.18	gi|288559962|ref|YP_003423448.1|	-	0.17	11.3	0.1	0.34	10.3	0.1	1.4	1	0	0	1	1	1	0	AICARFT/IMPCHase	bienzyme
DUF2530	PF10745.9	gi|288559962|ref|YP_003423448.1|	-	1.1	9.5	3.6	2.8	8.2	0.5	2.6	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2530)
DUF2149	PF09919.9	gi|288559963|ref|YP_003423449.1|	-	2.8e-23	82.0	0.8	3.3e-23	81.8	0.8	1.1	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2149)
SpoIIIAH	PF12685.7	gi|288559963|ref|YP_003423449.1|	-	0.02	14.7	0.7	0.02	14.7	0.7	1.5	1	1	0	1	1	1	0	SpoIIIAH-like	protein
DUF1727	PF08353.10	gi|288559964|ref|YP_003423450.1|	-	7.7e-34	115.9	0.2	1.9e-33	114.6	0.0	1.8	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1727)
Mur_ligase_M	PF08245.12	gi|288559964|ref|YP_003423450.1|	-	7.8e-17	61.9	0.1	2.4e-14	53.8	0.1	2.3	1	1	0	1	1	1	1	Mur	ligase	middle	domain
DZR	PF12773.7	gi|288559964|ref|YP_003423450.1|	-	0.00048	20.1	0.1	0.00092	19.2	0.1	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
RNA_POL_M_15KD	PF02150.16	gi|288559964|ref|YP_003423450.1|	-	0.00061	19.6	1.4	0.0012	18.6	1.4	1.5	1	0	0	1	1	1	1	RNA	polymerases	M/15	Kd	subunit
Zn_Tnp_IS1595	PF12760.7	gi|288559964|ref|YP_003423450.1|	-	0.0089	16.0	1.3	0.016	15.2	1.3	1.4	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
Nudix_N_2	PF14803.6	gi|288559964|ref|YP_003423450.1|	-	0.0089	15.9	0.8	0.018	14.9	0.8	1.4	1	0	0	1	1	1	1	Nudix	N-terminal
OrfB_Zn_ribbon	PF07282.11	gi|288559964|ref|YP_003423450.1|	-	0.017	15.0	0.1	0.038	13.9	0.1	1.5	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
DpnI	PF06044.12	gi|288559964|ref|YP_003423450.1|	-	0.047	13.3	0.9	0.19	11.3	0.5	2.1	2	0	0	2	2	2	0	Dam-replacing	family
zinc_ribbon_2	PF13240.6	gi|288559964|ref|YP_003423450.1|	-	0.063	13.0	2.1	0.34	10.7	0.1	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|288559964|ref|YP_003423450.1|	-	0.077	12.4	3.1	0.59	9.6	0.1	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
Lar_restr_allev	PF14354.6	gi|288559964|ref|YP_003423450.1|	-	0.21	12.0	0.4	0.41	11.1	0.4	1.4	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
zf-HIT	PF04438.16	gi|288559964|ref|YP_003423450.1|	-	0.31	11.0	1.7	4.2	7.3	0.1	2.3	2	0	0	2	2	2	0	HIT	zinc	finger
GATase_3	PF07685.14	gi|288559965|ref|YP_003423451.1|	-	3.3e-35	121.5	0.0	4.1e-35	121.2	0.0	1.1	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
DJ-1_PfpI	PF01965.24	gi|288559965|ref|YP_003423451.1|	-	0.017	15.0	0.0	0.024	14.4	0.0	1.2	1	0	0	1	1	1	0	DJ-1/PfpI	family
ATP-grasp_3	PF02655.14	gi|288559966|ref|YP_003423452.1|	-	2.6e-25	89.3	0.0	2.9e-23	82.7	0.0	2.5	2	1	0	2	2	2	1	ATP-grasp	domain
ATPgrasp_ST	PF14397.6	gi|288559966|ref|YP_003423452.1|	-	2.6e-09	36.7	0.1	1.5e-05	24.4	0.0	2.2	2	0	0	2	2	2	2	Sugar-transfer	associated	ATP-grasp
ATPgrasp_YheCD	PF14398.6	gi|288559966|ref|YP_003423452.1|	-	2.1e-07	30.4	0.0	0.006	15.9	0.0	2.4	2	1	0	2	2	2	2	YheC/D	like	ATP-grasp
CPSase_L_D2	PF02786.17	gi|288559966|ref|YP_003423452.1|	-	6.8e-07	29.0	0.0	3.5e-06	26.7	0.0	2.0	2	0	0	2	2	2	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
ATPgrasp_Ter	PF15632.6	gi|288559966|ref|YP_003423452.1|	-	2.9e-06	27.1	0.0	2e-05	24.3	0.0	2.1	2	0	0	2	2	2	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
RimK	PF08443.11	gi|288559966|ref|YP_003423452.1|	-	1.1e-05	25.1	0.6	0.035	13.7	0.0	2.7	3	0	0	3	3	3	2	RimK-like	ATP-grasp	domain
TTL	PF03133.15	gi|288559966|ref|YP_003423452.1|	-	2.5e-05	23.6	0.1	0.0022	17.2	0.0	2.3	2	0	0	2	2	2	1	Tubulin-tyrosine	ligase	family
GSH-S_ATP	PF02955.16	gi|288559966|ref|YP_003423452.1|	-	5e-05	22.8	0.0	0.00011	21.6	0.0	1.6	1	0	0	1	1	1	1	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
Flavodoxin_5	PF12724.7	gi|288559966|ref|YP_003423452.1|	-	0.0015	18.8	0.0	0.0027	18.0	0.0	1.3	1	0	0	1	1	1	1	Flavodoxin	domain
Dala_Dala_lig_C	PF07478.13	gi|288559966|ref|YP_003423452.1|	-	0.0086	15.6	0.1	0.02	14.4	0.1	1.6	1	1	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
NEMO	PF11577.8	gi|288559966|ref|YP_003423452.1|	-	2.5	8.2	6.8	12	6.0	0.1	3.6	3	0	0	3	3	3	0	NF-kappa-B	essential	modulator	NEMO
Phage_integrase	PF00589.22	gi|288559967|ref|YP_003423453.1|	-	3.5e-53	179.9	1.1	5.8e-53	179.2	1.1	1.4	1	0	0	1	1	1	1	Phage	integrase	family
Phage_int_SAM_4	PF13495.6	gi|288559967|ref|YP_003423453.1|	-	0.00027	21.3	1.8	0.0044	17.5	0.3	2.9	1	1	1	2	2	2	1	Phage	integrase,	N-terminal	SAM-like	domain
DUF3435	PF11917.8	gi|288559967|ref|YP_003423453.1|	-	0.00035	19.6	0.9	0.00071	18.6	0.1	1.7	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF3435)
Phage_integr_3	PF16795.5	gi|288559967|ref|YP_003423453.1|	-	0.00045	20.2	1.8	0.014	15.3	1.8	2.6	1	1	0	1	1	1	1	Archaeal	phage	integrase
Integrase_1	PF12835.7	gi|288559967|ref|YP_003423453.1|	-	0.0013	18.8	0.3	0.0021	18.2	0.3	1.3	1	0	0	1	1	1	1	Integrase
Phage_int_SAM_5	PF13102.6	gi|288559967|ref|YP_003423453.1|	-	0.0062	16.9	8.8	1.2	9.5	0.0	3.4	3	0	0	3	3	3	2	Phage	integrase	SAM-like	domain
Phage_int_SAM_1	PF02899.17	gi|288559967|ref|YP_003423453.1|	-	0.027	14.8	0.4	0.28	11.5	0.0	2.6	3	0	0	3	3	3	0	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_3	PF14659.6	gi|288559967|ref|YP_003423453.1|	-	0.038	14.3	1.0	0.038	14.3	1.0	3.2	3	0	0	3	3	3	0	Phage	integrase,	N-terminal	SAM-like	domain
Poxvirus_B22R_C	PF13168.6	gi|288559967|ref|YP_003423453.1|	-	0.055	12.9	0.5	0.1	12.1	0.5	1.4	1	0	0	1	1	1	0	Poxvirus	B22R	protein	C-terminal
GAD	PF02938.14	gi|288559967|ref|YP_003423453.1|	-	0.11	12.8	0.2	3.3	8.0	0.0	2.7	2	0	0	2	2	2	0	GAD	domain
DUF1987	PF09345.10	gi|288559967|ref|YP_003423453.1|	-	0.12	12.1	3.1	3.5	7.3	1.0	3.0	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF1987)
Toprim_4	PF13662.6	gi|288559968|ref|YP_003423454.1|	-	2.4e-14	53.6	0.6	7.6e-14	51.9	0.6	2.0	1	0	0	1	1	1	1	Toprim	domain
Toprim_2	PF13155.6	gi|288559968|ref|YP_003423454.1|	-	1.7e-05	25.2	0.0	6.4e-05	23.3	0.0	2.0	1	1	0	1	1	1	1	Toprim-like
Toprim	PF01751.22	gi|288559968|ref|YP_003423454.1|	-	0.0038	17.4	0.8	0.031	14.5	0.1	2.8	2	2	0	2	2	2	1	Toprim	domain
RraA-like	PF03737.15	gi|288559969|ref|YP_003423455.1|	-	4.4e-35	121.1	0.1	5.8e-35	120.7	0.1	1.2	1	0	0	1	1	1	1	Aldolase/RraA
Gar1	PF04410.14	gi|288559970|ref|YP_003423456.1|	-	4.4e-15	55.8	1.4	4.9e-15	55.6	1.4	1.1	1	0	0	1	1	1	1	Gar1/Naf1	RNA	binding	region
Sorting_nexin	PF03700.13	gi|288559970|ref|YP_003423456.1|	-	0.041	14.5	0.4	0.068	13.7	0.4	1.4	1	0	0	1	1	1	0	Sorting	nexin,	N-terminal	domain
TFIIB	PF00382.19	gi|288559971|ref|YP_003423457.1|	-	7.4e-42	141.3	0.7	3.5e-20	71.8	0.3	2.1	2	0	0	2	2	2	2	Transcription	factor	TFIIB	repeat
Sigma70_r4	PF04545.16	gi|288559971|ref|YP_003423457.1|	-	0.00058	19.3	0.1	0.093	12.3	0.1	2.8	2	0	0	2	2	2	1	Sigma-70,	region	4
Cyclin_C	PF02984.19	gi|288559971|ref|YP_003423457.1|	-	0.0055	16.8	0.0	0.23	11.5	0.0	2.2	1	1	1	2	2	2	1	Cyclin,	C-terminal	domain
HTH_AsnC-type	PF13404.6	gi|288559971|ref|YP_003423457.1|	-	0.016	15.1	0.6	0.17	11.7	0.0	2.7	3	0	0	3	3	3	0	AsnC-type	helix-turn-helix	domain
HTH_Tnp_ISL3	PF13542.6	gi|288559971|ref|YP_003423457.1|	-	0.037	13.4	0.1	0.93	9.0	0.0	2.4	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	transposase	family	ISL3
RB_B	PF01857.20	gi|288559971|ref|YP_003423457.1|	-	0.065	13.3	0.0	0.11	12.5	0.0	1.4	1	0	0	1	1	1	0	Retinoblastoma-associated	protein	B	domain
HTH_Crp_2	PF13545.6	gi|288559971|ref|YP_003423457.1|	-	0.067	13.2	0.4	12	6.0	0.0	3.1	4	0	0	4	4	4	0	Crp-like	helix-turn-helix	domain
LacI	PF00356.21	gi|288559971|ref|YP_003423457.1|	-	1.4	8.8	4.4	12	5.8	0.3	2.8	3	0	0	3	3	3	0	Bacterial	regulatory	proteins,	lacI	family
Glyco_trans_1_3	PF13528.6	gi|288559972|ref|YP_003423458.1|	-	1.6e-102	343.1	0.1	2.1e-102	342.7	0.1	1.1	1	0	0	1	1	1	1	Glycosyl	transferase	family	1
Glycos_transf_2	PF00535.26	gi|288559972|ref|YP_003423458.1|	-	6.9e-28	97.6	0.0	1.4e-27	96.5	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|288559972|ref|YP_003423458.1|	-	1.5e-09	38.1	0.0	4.4e-09	36.6	0.0	1.7	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.9	gi|288559972|ref|YP_003423458.1|	-	3.5e-07	30.0	0.1	5.7e-05	22.7	0.1	2.5	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tran_28_C	PF04101.16	gi|288559972|ref|YP_003423458.1|	-	0.00021	21.3	0.1	0.001	19.1	0.0	2.2	2	0	0	2	2	2	1	Glycosyltransferase	family	28	C-terminal	domain
Glyco_tranf_2_4	PF13704.6	gi|288559972|ref|YP_003423458.1|	-	0.0043	17.5	0.0	0.013	16.0	0.0	1.9	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.6	gi|288559972|ref|YP_003423458.1|	-	0.0053	16.3	0.0	0.011	15.2	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
DUF3899	PF13038.6	gi|288559973|ref|YP_003423459.1|	-	0.053	14.0	0.1	0.053	14.0	0.1	4.1	5	1	1	6	6	6	0	Domain	of	unknown	function	(DUF3899)
Chloroplast_duf	PF14476.6	gi|288559973|ref|YP_003423459.1|	-	0.066	12.2	0.1	0.32	9.9	0.0	1.9	2	0	0	2	2	2	0	Petal	formation-expressed
DPM2	PF07297.12	gi|288559973|ref|YP_003423459.1|	-	8.6	6.8	12.1	39	4.7	0.1	4.3	4	1	1	5	5	5	0	Dolichol	phosphate-mannose	biosynthesis	regulatory	protein	(DPM2)
TauE	PF01925.19	gi|288559974|ref|YP_003423460.1|	-	5.1e-43	147.4	25.7	5.7e-43	147.2	25.7	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
UPF0016	PF01169.19	gi|288559974|ref|YP_003423460.1|	-	7.1	7.0	18.3	3.4	8.1	0.1	3.9	3	1	0	4	4	4	0	Uncharacterized	protein	family	UPF0016
YbjQ_1	PF01906.17	gi|288559975|ref|YP_003423461.1|	-	0.0028	18.3	0.6	0.0098	16.5	0.0	2.2	3	0	0	3	3	3	1	Putative	heavy-metal-binding
YbjQ_1	PF01906.17	gi|288559976|ref|YP_003423462.1|	-	7.9e-31	106.8	1.0	8.7e-31	106.7	1.0	1.0	1	0	0	1	1	1	1	Putative	heavy-metal-binding
SeleniumBinding	PF11524.8	gi|288559976|ref|YP_003423462.1|	-	0.011	16.2	0.1	0.016	15.6	0.1	1.4	1	0	0	1	1	1	0	Selenium	binding	protein
DUF2116	PF09889.9	gi|288559977|ref|YP_003423463.1|	-	3.2e-25	87.9	1.8	3.5e-25	87.7	1.8	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
DUF2417	PF10329.9	gi|288559977|ref|YP_003423463.1|	-	0.0062	16.0	0.0	0.0062	16.0	0.0	1.1	1	0	0	1	1	1	1	Region	of	unknown	function	(DUF2417)
zf-ribbon_3	PF13248.6	gi|288559977|ref|YP_003423463.1|	-	0.016	14.6	3.6	0.025	14.0	3.6	1.4	1	1	0	1	1	1	0	zinc-ribbon	domain
DZR	PF12773.7	gi|288559977|ref|YP_003423463.1|	-	0.017	15.1	1.6	0.042	13.9	1.7	1.4	1	1	0	1	1	1	0	Double	zinc	ribbon
SNARE	PF05739.19	gi|288559977|ref|YP_003423463.1|	-	0.024	14.6	1.8	0.028	14.4	1.8	1.1	1	0	0	1	1	1	0	SNARE	domain
DNA_ligase_ZBD	PF03119.16	gi|288559977|ref|YP_003423463.1|	-	0.036	14.1	5.5	0.079	13.0	5.5	1.7	1	1	0	1	1	1	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Rad50_zn_hook	PF04423.14	gi|288559977|ref|YP_003423463.1|	-	0.075	12.9	0.9	0.075	12.9	0.9	1.5	2	0	0	2	2	2	0	Rad50	zinc	hook	motif
zf-NADH-PPase	PF09297.11	gi|288559977|ref|YP_003423463.1|	-	0.21	11.3	5.4	1.7	8.4	5.4	2.0	1	1	0	1	1	1	0	NADH	pyrophosphatase	zinc	ribbon	domain
DUF2256	PF10013.9	gi|288559977|ref|YP_003423463.1|	-	0.32	11.2	0.3	0.32	11.2	0.3	2.1	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2256)
UPF0547	PF10571.9	gi|288559977|ref|YP_003423463.1|	-	0.39	10.9	6.3	0.54	10.4	6.3	1.2	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
YhfH	PF14149.6	gi|288559977|ref|YP_003423463.1|	-	0.44	10.6	3.7	0.82	9.7	3.6	1.7	1	1	0	1	1	1	0	YhfH-like	protein
TatD_DNase	PF01026.21	gi|288559978|ref|YP_003423464.1|	-	6.7e-67	225.5	0.0	7.5e-67	225.4	0.0	1.0	1	0	0	1	1	1	1	TatD	related	DNase
DUF3437	PF11919.8	gi|288559978|ref|YP_003423464.1|	-	0.029	14.3	0.0	0.2	11.6	0.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3437)
Abhydrolase_5	PF12695.7	gi|288559978|ref|YP_003423464.1|	-	0.069	12.9	0.0	0.11	12.3	0.0	1.3	1	0	0	1	1	1	0	Alpha/beta	hydrolase	family
AA_kinase	PF00696.28	gi|288559979|ref|YP_003423465.1|	-	5.4e-30	104.8	0.5	1.6e-29	103.2	0.5	1.7	1	1	0	1	1	1	1	Amino	acid	kinase	family
PRAI	PF00697.22	gi|288559979|ref|YP_003423465.1|	-	0.021	14.6	0.0	0.047	13.5	0.0	1.4	1	1	0	1	1	1	0	N-(5'phosphoribosyl)anthranilate	(PRA)	isomerase
Big_1	PF02369.16	gi|288559980|ref|YP_003423466.1|	-	2.7e-58	193.9	89.8	3.1e-08	33.5	0.2	15.5	13	1	0	14	14	14	12	Bacterial	Ig-like	domain	(group	1)
Invasin_D3	PF09134.10	gi|288559980|ref|YP_003423466.1|	-	1.8e-48	162.8	112.0	3.8e-08	33.5	4.5	13.2	7	4	6	13	13	13	11	Invasin,	domain	3
CarboxypepD_reg	PF13620.6	gi|288559980|ref|YP_003423466.1|	-	5.4e-44	148.4	58.2	1.7e-05	25.0	0.5	12.5	12	0	0	12	12	12	12	Carboxypeptidase	regulatory-like	domain
MG4	PF17789.1	gi|288559980|ref|YP_003423466.1|	-	2e-21	75.9	64.3	0.00032	20.8	0.6	12.7	12	0	0	12	12	12	7	Macroglobulin	domain	MG4
CHB_HEX_C_1	PF13290.6	gi|288559980|ref|YP_003423466.1|	-	1.8e-10	40.7	0.0	1.8e-10	40.7	0.0	4.5	5	0	0	5	5	4	1	Chitobiase/beta-hexosaminidase	C-terminal	domain
DUF3426	PF11906.8	gi|288559980|ref|YP_003423466.1|	-	7e-10	39.3	3.3	0.54	10.4	0.2	7.9	8	2	1	10	10	9	2	Protein	of	unknown	function	(DUF3426)
DUF824	PF05688.11	gi|288559980|ref|YP_003423466.1|	-	8e-08	32.0	28.8	0.067	13.0	0.0	10.6	12	0	0	12	12	12	3	Salmonella	repeat	of	unknown	function	(DUF824)
Fn3_assoc	PF13287.6	gi|288559980|ref|YP_003423466.1|	-	1.2e-07	31.8	4.0	1.4e-07	31.5	0.3	3.3	2	0	0	2	2	2	1	Fn3	associated
DUF4399	PF14347.6	gi|288559980|ref|YP_003423466.1|	-	1e-05	25.8	0.1	0.31	11.4	0.0	5.1	4	0	0	4	4	4	1	Domain	of	unknown	function	(DUF4399)
PEGA	PF08308.11	gi|288559980|ref|YP_003423466.1|	-	0.0053	16.6	17.7	0.73	9.8	0.1	8.0	8	0	0	8	8	8	1	PEGA	domain
Staphylcoagulse	PF04022.12	gi|288559980|ref|YP_003423466.1|	-	0.023	14.2	0.2	0.023	14.2	0.2	8.8	8	0	0	8	8	7	0	Staphylocoagulase	repeat
Pyocin_S	PF06958.12	gi|288559980|ref|YP_003423466.1|	-	0.068	13.7	13.3	7.1	7.2	0.4	5.1	4	2	0	4	4	4	0	S-type	Pyocin
DUF2154	PF09922.9	gi|288559980|ref|YP_003423466.1|	-	3.4	7.6	18.3	29	4.6	0.3	7.3	8	0	0	8	8	8	0	Cell	wall-active	antibiotics	response	4TMS	YvqF
Phage_holin_5_2	PF16079.5	gi|288559983|ref|YP_003423469.1|	-	0.021	15.2	0.2	0.021	15.2	0.2	6.4	4	3	2	6	6	6	0	Phage	holin	family	Hol44,	in	holin	superfamily	V
DUF2061	PF09834.9	gi|288559983|ref|YP_003423469.1|	-	0.045	14.3	2.3	0.045	14.3	2.3	4.2	6	0	0	6	6	6	0	Predicted	membrane	protein	(DUF2061)
Peptidase_C1	PF00112.23	gi|288559984|ref|YP_003423470.1|	-	6.1e-19	69.0	1.6	6.1e-19	69.0	1.6	1.8	2	0	0	2	2	2	1	Papain	family	cysteine	protease
Big_1	PF02369.16	gi|288559984|ref|YP_003423470.1|	-	2.4e-12	46.7	7.6	7.6e-08	32.2	6.1	2.9	2	0	0	2	2	2	2	Bacterial	Ig-like	domain	(group	1)
Lectin_like	PF18560.1	gi|288559984|ref|YP_003423470.1|	-	5.4e-12	46.1	3.9	5.4e-12	46.1	3.9	3.1	2	1	0	2	2	2	1	Lectin	like	domain
Big_3_5	PF16640.5	gi|288559984|ref|YP_003423470.1|	-	2e-11	43.9	14.3	3.9e-08	33.4	7.3	3.3	3	0	0	3	3	3	2	Bacterial	Ig-like	domain	(group	3)
Invasin_D3	PF09134.10	gi|288559984|ref|YP_003423470.1|	-	1.6e-06	28.3	12.9	9.8e-05	22.6	8.2	2.9	2	0	0	2	2	2	2	Invasin,	domain	3
MG4	PF17789.1	gi|288559984|ref|YP_003423470.1|	-	4.1e-06	26.9	1.6	0.0031	17.6	0.0	3.0	2	1	0	2	2	2	2	Macroglobulin	domain	MG4
CarboxypepD_reg	PF13620.6	gi|288559984|ref|YP_003423470.1|	-	0.00039	20.6	3.7	0.069	13.4	1.1	2.6	2	0	0	2	2	2	2	Carboxypeptidase	regulatory-like	domain
Chlam_PMP	PF02415.17	gi|288559984|ref|YP_003423470.1|	-	0.005	17.2	0.0	0.005	17.2	0.0	11.5	12	0	0	12	12	12	3	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
YtkA	PF13115.6	gi|288559984|ref|YP_003423470.1|	-	0.012	16.2	1.3	0.036	14.7	0.6	2.2	2	0	0	2	2	2	0	YtkA-like
DUF2536	PF10750.9	gi|288559984|ref|YP_003423470.1|	-	0.5	10.3	3.3	6.8	6.7	0.1	2.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2536)
eRF1_2	PF03464.15	gi|288559985|ref|YP_003423471.1|	-	3.1e-45	153.8	0.0	6.3e-45	152.7	0.0	1.5	1	0	0	1	1	1	1	eRF1	domain	2
eRF1_3	PF03465.15	gi|288559985|ref|YP_003423471.1|	-	2.7e-32	111.6	2.4	3.4e-32	111.3	0.6	2.1	2	1	0	2	2	2	1	eRF1	domain	3
eRF1_1	PF03463.15	gi|288559985|ref|YP_003423471.1|	-	8.4e-14	51.7	0.0	1.7e-13	50.7	0.0	1.5	1	0	0	1	1	1	1	eRF1	domain	1
baeRF_family10	PF18854.1	gi|288559985|ref|YP_003423471.1|	-	3.6e-13	49.9	0.0	6e-13	49.2	0.0	1.3	1	0	0	1	1	1	1	Bacterial	archaeo-eukaryotic	release	factor	family	10
acVLRF1	PF18859.1	gi|288559985|ref|YP_003423471.1|	-	1.2e-12	48.2	0.0	2.6e-12	47.2	0.0	1.5	1	0	0	1	1	1	1	Actinobacteria/chloroflexi	VLRF1	release	factor
baeRF_family12	PF18856.1	gi|288559985|ref|YP_003423471.1|	-	0.0087	16.6	0.7	0.049	14.2	0.0	2.4	3	0	0	3	3	3	1	Bacterial	archaeo-eukaryotic	release	factor	family	12
HypA	PF01155.19	gi|288559985|ref|YP_003423471.1|	-	0.011	15.7	0.1	0.023	14.7	0.1	1.5	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zinc_ribbon_10	PF10058.9	gi|288559985|ref|YP_003423471.1|	-	0.023	14.4	0.1	0.065	13.0	0.1	1.8	1	0	0	1	1	1	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
DUF4930	PF16284.5	gi|288559985|ref|YP_003423471.1|	-	0.03	14.3	0.0	0.085	12.8	0.0	1.8	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4930)
Zn-ribbon_8	PF09723.10	gi|288559985|ref|YP_003423471.1|	-	0.033	14.3	2.1	0.033	14.3	2.1	1.8	2	0	0	2	2	1	0	Zinc	ribbon	domain
DUF507	PF04368.13	gi|288559985|ref|YP_003423471.1|	-	0.052	13.5	1.4	0.12	12.3	1.4	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF507)
RNA_POL_M_15KD	PF02150.16	gi|288559985|ref|YP_003423471.1|	-	0.057	13.3	1.1	2.3	8.1	0.0	2.5	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
Flagellin_N	PF00669.20	gi|288559985|ref|YP_003423471.1|	-	0.078	13.1	0.3	0.2	11.7	0.1	1.8	2	0	0	2	2	2	0	Bacterial	flagellin	N-terminal	helical	region
BMFP	PF04380.13	gi|288559985|ref|YP_003423471.1|	-	0.16	12.5	0.5	0.62	10.6	0.1	2.2	2	0	0	2	2	2	0	Membrane	fusogenic	activity
Cep57_MT_bd	PF06657.13	gi|288559985|ref|YP_003423471.1|	-	0.26	11.8	1.8	0.77	10.3	0.1	2.7	3	1	0	3	3	3	0	Centrosome	microtubule-binding	domain	of	Cep57
Rad50_zn_hook	PF04423.14	gi|288559985|ref|YP_003423471.1|	-	3.3	7.6	8.1	4.1	7.3	0.4	3.8	3	0	0	3	3	3	0	Rad50	zinc	hook	motif
DUF655	PF04919.12	gi|288559986|ref|YP_003423472.1|	-	9.2e-26	90.9	3.8	1.2e-25	90.5	3.8	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF655)
HHH_3	PF12836.7	gi|288559986|ref|YP_003423472.1|	-	0.011	16.0	0.0	0.033	14.5	0.0	1.8	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
HHH_6	PF14579.6	gi|288559986|ref|YP_003423472.1|	-	0.025	14.8	0.0	0.057	13.7	0.0	1.6	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
SNAPc_SNAP43	PF09808.9	gi|288559987|ref|YP_003423473.1|	-	0.072	13.0	0.4	0.11	12.4	0.4	1.2	1	0	0	1	1	1	0	Small	nuclear	RNA	activating	complex	(SNAPc),	subunit	SNAP43
APG6_N	PF17675.1	gi|288559988|ref|YP_003423474.1|	-	0.0013	19.2	25.3	0.018	15.6	6.6	2.8	1	1	2	3	3	3	2	Apg6	coiled-coil	region
V_ATPase_I	PF01496.19	gi|288559988|ref|YP_003423474.1|	-	0.0055	14.7	10.8	0.007	14.4	10.8	1.1	1	0	0	1	1	1	1	V-type	ATPase	116kDa	subunit	family
KELK	PF15796.5	gi|288559988|ref|YP_003423474.1|	-	0.053	14.0	13.9	0.058	13.9	1.7	3.1	3	0	0	3	3	3	0	KELK-motif	containing	domain	of	MRCK	Ser/Thr	protein	kinase
Yuri_gagarin	PF15934.5	gi|288559988|ref|YP_003423474.1|	-	0.12	12.2	15.5	0.4	10.5	6.6	2.4	1	1	1	2	2	2	0	Yuri	gagarin
Anthrax_toxA	PF03497.16	gi|288559988|ref|YP_003423474.1|	-	0.14	12.3	4.4	0.26	11.4	3.8	1.7	1	1	0	1	1	1	0	Anthrax	toxin	LF	subunit
Atg14	PF10186.9	gi|288559988|ref|YP_003423474.1|	-	0.69	8.9	12.4	0.91	8.5	12.4	1.2	1	0	0	1	1	1	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
DUF4758	PF15950.5	gi|288559988|ref|YP_003423474.1|	-	0.9	9.9	7.4	34	4.8	7.4	2.3	1	1	0	1	1	1	0	Putative	sperm	flagellar	membrane	protein
Rootletin	PF15035.6	gi|288559988|ref|YP_003423474.1|	-	1.6	8.7	16.3	22	5.0	12.0	2.8	1	1	0	2	2	2	0	Ciliary	rootlet	component,	centrosome	cohesion
BST2	PF16716.5	gi|288559988|ref|YP_003423474.1|	-	2.6	8.7	16.3	2.5	8.7	2.1	2.7	2	1	1	3	3	3	0	Bone	marrow	stromal	antigen	2
DUF724	PF05266.14	gi|288559988|ref|YP_003423474.1|	-	4.1	7.2	17.9	9.4	6.0	17.0	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF724)
DivIC	PF04977.15	gi|288559988|ref|YP_003423474.1|	-	4.5	7.1	14.7	2.6	7.9	6.3	3.1	1	1	1	2	2	2	0	Septum	formation	initiator
DUF4200	PF13863.6	gi|288559988|ref|YP_003423474.1|	-	4.5	7.7	22.4	5.4	7.4	10.0	2.8	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4200)
TMF_DNA_bd	PF12329.8	gi|288559988|ref|YP_003423474.1|	-	4.9	7.2	25.5	1.2	9.2	11.6	2.9	2	1	0	2	2	2	0	TATA	element	modulatory	factor	1	DNA	binding
CENP-F_leu_zip	PF10473.9	gi|288559988|ref|YP_003423474.1|	-	5.3	7.1	27.8	3.7	7.6	14.7	2.5	1	1	1	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
TMPIT	PF07851.13	gi|288559988|ref|YP_003423474.1|	-	7.9	5.6	11.4	3.6	6.7	8.4	1.8	1	1	1	2	2	2	0	TMPIT-like	protein
AbiJ_NTD3	PF18860.1	gi|288559989|ref|YP_003423475.1|	-	0.043	13.4	0.0	0.063	12.8	0.0	1.2	1	0	0	1	1	1	0	AbiJ	N-terminal	domain	3
5-FTHF_cyc-lig	PF01812.20	gi|288559991|ref|YP_003423477.1|	-	4e-27	95.3	0.0	4.7e-27	95.0	0.0	1.0	1	0	0	1	1	1	1	5-formyltetrahydrofolate	cyclo-ligase	family
Rubrerythrin	PF02915.17	gi|288559992|ref|YP_003423478.1|	-	8.2e-24	84.6	8.8	1.5e-22	80.4	8.8	2.1	1	1	0	1	1	1	1	Rubrerythrin
Ferritin	PF00210.24	gi|288559992|ref|YP_003423478.1|	-	1.9e-06	27.9	4.4	6.2e-05	22.9	4.4	2.1	1	1	0	1	1	1	1	Ferritin-like	domain
zf-C2HC5	PF06221.13	gi|288559992|ref|YP_003423478.1|	-	0.007	16.3	0.4	0.011	15.6	0.4	1.3	1	0	0	1	1	1	1	Putative	zinc	finger	motif,	C2HC5-type
HypA	PF01155.19	gi|288559992|ref|YP_003423478.1|	-	0.012	15.6	0.1	0.023	14.7	0.1	1.5	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zinc_ribbon_10	PF10058.9	gi|288559992|ref|YP_003423478.1|	-	0.018	14.8	2.7	0.38	10.5	0.2	2.5	1	1	1	2	2	2	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
zinc_ribbon_2	PF13240.6	gi|288559992|ref|YP_003423478.1|	-	0.035	13.8	2.9	0.06	13.1	2.9	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
SRC-1	PF08832.10	gi|288559992|ref|YP_003423478.1|	-	0.075	14.1	0.0	0.11	13.5	0.0	1.4	1	0	0	1	1	1	0	Steroid	receptor	coactivator
TFIIS_C	PF01096.18	gi|288559992|ref|YP_003423478.1|	-	0.077	12.9	2.3	1.7	8.6	0.2	2.3	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
HalOD2	PF18547.1	gi|288559992|ref|YP_003423478.1|	-	0.084	12.8	0.1	0.17	11.8	0.1	1.6	1	0	0	1	1	1	0	Halobacterial	output	domain	2
DZR	PF12773.7	gi|288559992|ref|YP_003423478.1|	-	0.096	12.7	0.4	0.16	12.0	0.4	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
zf-FPG_IleRS	PF06827.14	gi|288559992|ref|YP_003423478.1|	-	0.14	12.1	1.5	0.4	10.6	1.5	1.8	1	1	0	1	1	1	0	Zinc	finger	found	in	FPG	and	IleRS
Cna_B	PF05738.13	gi|288559992|ref|YP_003423478.1|	-	0.17	12.4	1.5	0.31	11.6	0.2	1.9	1	1	1	2	2	2	0	Cna	protein	B-type	domain
TF_Zn_Ribbon	PF08271.12	gi|288559992|ref|YP_003423478.1|	-	0.18	11.3	0.8	2.3	7.8	0.1	2.3	2	0	0	2	2	2	0	TFIIB	zinc-binding
OrfB_Zn_ribbon	PF07282.11	gi|288559992|ref|YP_003423478.1|	-	0.32	10.9	1.6	0.38	10.7	0.5	1.7	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
NUDIX	PF00293.28	gi|288559994|ref|YP_003423480.1|	-	7.7e-12	45.4	0.0	9.3e-12	45.1	0.0	1.1	1	0	0	1	1	1	1	NUDIX	domain
SseB	PF07179.12	gi|288559995|ref|YP_003423481.1|	-	2.3e-15	56.9	0.0	3.2e-15	56.5	0.0	1.2	1	0	0	1	1	1	1	SseB	protein	N-terminal	domain
Nif11	PF07862.11	gi|288559995|ref|YP_003423481.1|	-	0.029	14.7	0.2	0.064	13.6	0.2	1.6	1	0	0	1	1	1	0	Nif11	domain
Styelin	PF17562.2	gi|288559995|ref|YP_003423481.1|	-	3.4	8.1	12.1	14	6.2	0.2	3.1	2	1	1	3	3	3	0	Styelin
SseB	PF07179.12	gi|288559996|ref|YP_003423482.1|	-	3.7e-13	49.8	0.0	4e-13	49.7	0.0	1.0	1	0	0	1	1	1	1	SseB	protein	N-terminal	domain
DUF4065	PF13274.6	gi|288559997|ref|YP_003423483.1|	-	5.6e-09	36.9	2.1	8.5e-09	36.3	2.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4065)
zinc_ribbon_2	PF13240.6	gi|288559998|ref|YP_003423484.1|	-	1.6e-07	30.8	10.4	3.9e-07	29.6	5.7	2.4	2	0	0	2	2	2	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|288559998|ref|YP_003423484.1|	-	8.9e-07	28.1	8.7	5.3e-06	25.6	3.8	2.5	2	0	0	2	2	2	1	zinc-ribbon	domain
DZR	PF12773.7	gi|288559998|ref|YP_003423484.1|	-	4e-06	26.7	7.7	1.5e-05	24.9	3.1	2.3	2	0	0	2	2	2	1	Double	zinc	ribbon
EF-hand_8	PF13833.6	gi|288559998|ref|YP_003423484.1|	-	0.00032	20.5	0.2	0.00054	19.7	0.2	1.3	1	0	0	1	1	1	1	EF-hand	domain	pair
EF-hand_1	PF00036.32	gi|288559998|ref|YP_003423484.1|	-	0.0046	16.4	1.8	0.0062	16.0	0.5	1.8	2	0	0	2	2	2	1	EF	hand
EF-hand_5	PF13202.6	gi|288559998|ref|YP_003423484.1|	-	0.02	14.4	0.2	0.04	13.4	0.2	1.5	1	0	0	1	1	1	0	EF	hand
DUF4834	PF16118.5	gi|288559998|ref|YP_003423484.1|	-	0.081	13.9	1.1	0.17	12.9	0.1	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4834)
EF-hand_13	PF17958.1	gi|288559998|ref|YP_003423484.1|	-	0.089	12.6	0.0	0.16	11.8	0.0	1.5	1	0	0	1	1	1	0	EF-hand	domain
zinc_ribbon_15	PF17032.5	gi|288559998|ref|YP_003423484.1|	-	0.093	13.5	6.3	1	10.1	3.8	2.6	2	0	0	2	2	2	0	zinc-ribbon	family
TF_Zn_Ribbon	PF08271.12	gi|288559998|ref|YP_003423484.1|	-	0.15	11.6	7.0	0.1	12.1	3.1	2.5	2	0	0	2	2	2	0	TFIIB	zinc-binding
EF-hand_6	PF13405.6	gi|288559998|ref|YP_003423484.1|	-	0.16	12.0	2.7	0.25	11.4	0.8	2.2	2	0	0	2	2	2	0	EF-hand	domain
SID-1_RNA_chan	PF13965.6	gi|288559998|ref|YP_003423484.1|	-	0.16	10.4	0.5	0.19	10.1	0.5	1.1	1	0	0	1	1	1	0	dsRNA-gated	channel	SID-1
V_ATPase_I	PF01496.19	gi|288559998|ref|YP_003423484.1|	-	0.17	9.8	0.1	0.24	9.2	0.1	1.2	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
SpoIIIAH	PF12685.7	gi|288559998|ref|YP_003423484.1|	-	0.17	11.7	7.6	0.052	13.4	4.7	1.5	1	1	0	1	1	1	0	SpoIIIAH-like	protein
Serinc	PF03348.15	gi|288559998|ref|YP_003423484.1|	-	0.18	10.7	2.1	0.23	10.3	2.1	1.1	1	0	0	1	1	1	0	Serine	incorporator	(Serinc)
Orf78	PF06024.12	gi|288559998|ref|YP_003423484.1|	-	0.22	11.8	3.1	1.6	9.1	0.0	2.2	2	0	0	2	2	2	0	Orf78	(ac78)
Nudix_N_2	PF14803.6	gi|288559998|ref|YP_003423484.1|	-	0.28	11.1	6.4	0.62	10.0	0.1	3.2	3	0	0	3	3	3	0	Nudix	N-terminal
zf-LITAF-like	PF10601.9	gi|288559998|ref|YP_003423484.1|	-	0.29	11.4	4.8	5.9	7.2	0.4	3.3	3	0	0	3	3	3	0	LITAF-like	zinc	ribbon	domain
zf-Di19	PF05605.12	gi|288559998|ref|YP_003423484.1|	-	0.36	11.1	1.9	17	5.8	0.1	2.5	2	0	0	2	2	2	0	Drought	induced	19	protein	(Di19),	zinc-binding
NRDD	PF13597.6	gi|288559998|ref|YP_003423484.1|	-	0.56	8.9	4.2	8.4	5.0	0.0	2.2	2	0	0	2	2	2	0	Anaerobic	ribonucleoside-triphosphate	reductase
HypA	PF01155.19	gi|288559998|ref|YP_003423484.1|	-	2.2	8.3	5.2	14	5.7	1.7	2.3	2	0	0	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zf-tcix	PF14952.6	gi|288559998|ref|YP_003423484.1|	-	3.1	7.5	10.3	0.19	11.4	4.7	1.8	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
zf-C6H2	PF15801.5	gi|288559998|ref|YP_003423484.1|	-	3.5	8.0	6.7	16	5.9	2.7	2.4	2	0	0	2	2	2	0	zf-MYND-like	zinc	finger,	mRNA-binding
SseB	PF07179.12	gi|288559999|ref|YP_003423485.1|	-	2.5e-12	47.1	0.0	4.1e-12	46.5	0.0	1.3	1	0	0	1	1	1	1	SseB	protein	N-terminal	domain
AAA_14	PF13173.6	gi|288560001|ref|YP_003423487.1|	-	2e-26	92.5	0.1	5.8e-26	91.1	0.1	1.8	1	0	0	1	1	1	1	AAA	domain
DUF4143	PF13635.6	gi|288560001|ref|YP_003423487.1|	-	5.4e-08	33.0	0.1	8.9e-08	32.3	0.1	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
HTH_11	PF08279.12	gi|288560001|ref|YP_003423487.1|	-	0.0097	15.8	0.0	0.034	14.1	0.0	1.9	2	0	0	2	2	2	1	HTH	domain
RNA_pol_I_A49	PF06870.12	gi|288560001|ref|YP_003423487.1|	-	0.011	14.6	0.1	0.02	13.8	0.1	1.3	1	0	0	1	1	1	0	A49-like	RNA	polymerase	I	associated	factor
HTH_36	PF13730.6	gi|288560001|ref|YP_003423487.1|	-	0.025	14.5	0.1	0.06	13.3	0.1	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
ResIII	PF04851.15	gi|288560001|ref|YP_003423487.1|	-	0.038	14.0	0.0	0.24	11.4	0.0	2.3	2	1	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
HTH_DeoR	PF08220.12	gi|288560001|ref|YP_003423487.1|	-	0.054	13.2	0.0	0.29	10.9	0.0	2.2	2	0	0	2	2	2	0	DeoR-like	helix-turn-helix	domain
AAA_16	PF13191.6	gi|288560001|ref|YP_003423487.1|	-	0.11	12.8	0.0	0.28	11.5	0.0	1.6	1	1	0	1	1	1	0	AAA	ATPase	domain
NACHT	PF05729.12	gi|288560001|ref|YP_003423487.1|	-	0.17	11.8	0.0	0.3	11.0	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
DUF5342	PF17277.2	gi|288560001|ref|YP_003423487.1|	-	1.6	9.1	3.9	11	6.5	0.2	2.8	3	0	0	3	3	3	0	Family	of	unknown	function	(DUF5342)
CPBP	PF02517.16	gi|288560002|ref|YP_003423488.1|	-	0.00019	21.7	4.5	0.00019	21.7	4.5	2.6	2	1	0	2	2	2	1	CPBP	intramembrane	metalloprotease
Potass_KdpF	PF09604.10	gi|288560002|ref|YP_003423488.1|	-	3	7.9	10.5	0.39	10.7	5.0	2.4	2	0	0	2	2	2	0	F	subunit	of	K+-transporting	ATPase	(Potass_KdpF)
ABC1	PF03109.16	gi|288560003|ref|YP_003423489.1|	-	9.7e-31	106.4	0.0	2.4e-30	105.2	0.0	1.7	1	0	0	1	1	1	1	ABC1	family
RIO1	PF01163.22	gi|288560003|ref|YP_003423489.1|	-	0.00022	20.9	0.1	0.002	17.8	0.1	2.3	1	1	0	1	1	1	1	RIO1	family
WaaY	PF06176.11	gi|288560003|ref|YP_003423489.1|	-	0.00066	19.4	0.6	0.00066	19.4	0.6	1.8	2	0	0	2	2	2	1	Lipopolysaccharide	core	biosynthesis	protein	(WaaY)
APH	PF01636.23	gi|288560003|ref|YP_003423489.1|	-	0.001	19.0	0.0	0.0019	18.2	0.0	1.3	1	0	0	1	1	1	1	Phosphotransferase	enzyme	family
Pkinase	PF00069.25	gi|288560003|ref|YP_003423489.1|	-	0.013	14.9	0.5	0.12	11.7	0.5	2.2	1	1	0	1	1	1	0	Protein	kinase	domain
DUF308	PF03729.13	gi|288560004|ref|YP_003423490.1|	-	4.5e-09	36.5	57.6	3.1e-08	33.8	25.0	3.1	2	1	1	3	3	3	3	Short	repeat	of	unknown	function	(DUF308)
DUF373	PF04123.13	gi|288560004|ref|YP_003423490.1|	-	0.014	14.8	6.2	0.014	14.8	6.2	3.2	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF373)
DUF2892	PF11127.8	gi|288560004|ref|YP_003423490.1|	-	0.086	12.9	30.8	0.063	13.3	2.6	3.5	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2892)
Erg28	PF03694.13	gi|288560004|ref|YP_003423490.1|	-	6.8	7.1	8.4	0.7	10.3	0.4	2.5	2	1	0	2	2	2	0	Erg28	like	protein
TPR_8	PF13181.6	gi|288560005|ref|YP_003423491.1|	-	0.0001	22.2	9.4	0.0029	17.7	0.3	4.2	3	1	1	4	4	4	2	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|288560005|ref|YP_003423491.1|	-	0.00082	19.3	11.4	0.27	11.4	1.4	4.3	3	1	1	4	4	4	2	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|288560005|ref|YP_003423491.1|	-	0.0016	19.1	0.5	2.2	9.3	0.0	3.6	3	1	1	4	4	3	1	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|288560005|ref|YP_003423491.1|	-	0.0034	18.0	1.2	0.52	11.0	0.1	2.8	2	1	1	3	3	3	2	Tetratricopeptide	repeat
MIT	PF04212.18	gi|288560005|ref|YP_003423491.1|	-	0.0036	17.3	1.0	0.0036	17.3	1.0	3.5	4	1	1	5	5	5	2	MIT	(microtubule	interacting	and	transport)	domain
PPR	PF01535.20	gi|288560005|ref|YP_003423491.1|	-	0.0057	16.8	1.9	12	6.4	0.0	4.8	4	1	1	5	5	5	1	PPR	repeat
ERCC3_RAD25_C	PF16203.5	gi|288560005|ref|YP_003423491.1|	-	0.011	15.0	0.0	0.023	13.9	0.0	1.5	1	0	0	1	1	1	0	ERCC3/RAD25/XPB	C-terminal	helicase
IBD	PF10416.9	gi|288560005|ref|YP_003423491.1|	-	0.018	15.1	2.1	3.8	7.5	0.2	2.7	2	0	0	2	2	2	0	Transcription-initiator	DNA-binding	domain	IBD
zf-RRPl_C4	PF17026.5	gi|288560005|ref|YP_003423491.1|	-	0.02	15.0	2.2	0.034	14.2	1.4	1.7	1	1	0	2	2	2	0	Putative	ribonucleoprotein	zinc-finger	pf	C4	type
Toprim_C_rpt	PF13368.6	gi|288560005|ref|YP_003423491.1|	-	0.025	14.6	0.7	0.46	10.5	0.0	2.6	2	1	1	3	3	3	0	Topoisomerase	C-terminal	repeat
TPR_17	PF13431.6	gi|288560005|ref|YP_003423491.1|	-	0.047	14.1	1.1	14	6.4	0.0	3.9	4	0	0	4	4	4	0	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|288560005|ref|YP_003423491.1|	-	0.089	13.1	6.1	14	6.0	0.5	4.1	3	1	1	4	4	4	0	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|288560005|ref|YP_003423491.1|	-	0.15	12.6	1.6	3.9	8.1	0.1	3.1	3	1	0	3	3	3	0	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|288560005|ref|YP_003423491.1|	-	0.52	10.2	11.7	0.62	10.0	1.1	4.3	3	1	1	4	4	4	0	Tetratricopeptide	repeat
ADP_ribosyl_GH	PF03747.14	gi|288560006|ref|YP_003423492.1|	-	4.2e-59	200.7	0.0	5e-59	200.4	0.0	1.0	1	0	0	1	1	1	1	ADP-ribosylglycohydrolase
PHP	PF02811.19	gi|288560007|ref|YP_003423493.1|	-	0.12	12.6	0.0	0.18	12.1	0.0	1.3	1	0	0	1	1	1	0	PHP	domain
MORN_2	PF07661.13	gi|288560008|ref|YP_003423494.1|	-	0.022	14.9	0.6	0.022	14.9	0.6	5.0	5	0	0	5	5	5	0	MORN	repeat	variant
Ribosomal_L35Ae	PF01247.18	gi|288560009|ref|YP_003423495.1|	-	0.044	14.0	1.3	8.7	6.6	0.1	2.4	2	1	0	2	2	2	0	Ribosomal	protein	L35Ae
DUF2779	PF11074.8	gi|288560010|ref|YP_003423496.1|	-	9.6e-41	139.2	1.3	1.5e-40	138.6	0.4	1.8	2	0	0	2	2	2	1	Domain	of	unknown	function(DUF2779)
Cas_Cas4	PF01930.17	gi|288560010|ref|YP_003423496.1|	-	1.1e-05	25.6	4.5	3.5e-05	23.9	4.5	2.0	1	1	0	1	1	1	1	Domain	of	unknown	function	DUF83
DUF4013	PF13197.6	gi|288560012|ref|YP_003423498.1|	-	6.5e-19	68.4	18.4	6.5e-19	68.4	18.4	2.2	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF4013)
Bro-N	PF02498.17	gi|288560014|ref|YP_003423500.1|	-	2.6e-11	44.1	0.0	5.9e-11	42.9	0.0	1.6	1	0	0	1	1	1	1	BRO	family,	N-terminal	domain
Wzz	PF02706.15	gi|288560016|ref|YP_003423502.1|	-	0.039	14.3	0.2	0.26	11.6	0.0	2.3	2	0	0	2	2	2	0	Chain	length	determinant	protein
YozE_SAM_like	PF06855.12	gi|288560016|ref|YP_003423502.1|	-	0.059	13.6	0.8	0.18	12.0	0.8	1.8	1	1	0	1	1	1	0	YozE	SAM-like	fold
DUF4870	PF09685.10	gi|288560017|ref|YP_003423503.1|	-	0.00018	21.6	5.1	0.00022	21.3	5.1	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4870)
SdpI	PF13630.6	gi|288560017|ref|YP_003423503.1|	-	0.043	13.9	1.2	0.043	13.9	1.2	2.1	1	1	1	2	2	2	0	SdpI/YhfL	protein	family
PIRT	PF15099.6	gi|288560017|ref|YP_003423503.1|	-	0.19	11.3	3.2	0.22	11.1	3.2	1.1	1	0	0	1	1	1	0	Phosphoinositide-interacting	protein	family
DUF2407_C	PF13373.6	gi|288560017|ref|YP_003423503.1|	-	0.37	10.9	1.3	0.67	10.1	1.3	1.4	1	1	0	1	1	1	0	DUF2407	C-terminal	domain
SseB	PF07179.12	gi|288560018|ref|YP_003423504.1|	-	1.2e-16	61.1	0.0	2.6e-16	60.0	0.0	1.5	1	0	0	1	1	1	1	SseB	protein	N-terminal	domain
DUF1539	PF07560.11	gi|288560018|ref|YP_003423504.1|	-	0.062	13.4	0.8	0.4	10.8	0.1	2.1	2	0	0	2	2	2	0	Domain	of	Unknown	Function	(DUF1539)
CdiI_2	PF18593.1	gi|288560018|ref|YP_003423504.1|	-	0.5	11.1	2.7	1.5	9.5	0.1	2.6	3	0	0	3	3	3	0	CdiI	immunity	protein
UBA_5	PF16577.5	gi|288560019|ref|YP_003423505.1|	-	0.13	12.4	0.0	0.15	12.2	0.0	1.1	1	0	0	1	1	1	0	UBA	domain
Toxin_YhaV	PF11663.8	gi|288560020|ref|YP_003423506.1|	-	0.048	13.7	0.4	0.064	13.3	0.4	1.3	1	1	0	1	1	1	0	Toxin	with	endonuclease	activity,	of	toxin-antitoxin	system
DZR	PF12773.7	gi|288560021|ref|YP_003423507.1|	-	6.4e-11	42.1	9.7	1.7e-09	37.5	4.8	2.8	2	2	0	2	2	2	2	Double	zinc	ribbon
zinc_ribbon_2	PF13240.6	gi|288560021|ref|YP_003423507.1|	-	4.7e-09	35.7	28.3	1.8e-06	27.5	4.1	4.1	4	0	0	4	4	4	2	zinc-ribbon	domain
Nudix_N_2	PF14803.6	gi|288560021|ref|YP_003423507.1|	-	0.0017	18.2	8.5	0.27	11.2	0.1	4.0	4	0	0	4	4	4	2	Nudix	N-terminal
GFA	PF04828.14	gi|288560021|ref|YP_003423507.1|	-	0.19	12.1	8.2	2.8	8.3	0.1	3.8	2	2	2	4	4	4	0	Glutathione-dependent	formaldehyde-activating	enzyme
zf-ribbon_3	PF13248.6	gi|288560021|ref|YP_003423507.1|	-	0.21	11.1	21.8	1.8	8.1	2.0	4.8	4	1	1	5	5	5	0	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.11	gi|288560021|ref|YP_003423507.1|	-	0.56	10.2	12.1	1.1	9.2	0.9	3.7	3	0	0	3	3	3	0	Putative	transposase	DNA-binding	domain
zinc_ribbon_15	PF17032.5	gi|288560021|ref|YP_003423507.1|	-	0.83	10.5	21.7	0.52	11.1	1.1	3.5	3	1	0	3	3	3	0	zinc-ribbon	family
zf-LITAF-like	PF10601.9	gi|288560021|ref|YP_003423507.1|	-	1.2	9.4	0.0	1.2	9.4	0.0	4.1	3	1	1	4	4	4	0	LITAF-like	zinc	ribbon	domain
DUF2321	PF10083.9	gi|288560021|ref|YP_003423507.1|	-	2.5	7.7	9.2	2	8.0	3.4	2.5	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2321)
PASTA	PF03793.19	gi|288560024|ref|YP_003423510.1|	-	0.065	13.1	0.0	0.42	10.5	0.0	1.9	2	0	0	2	2	2	0	PASTA	domain
DUF1664	PF07889.12	gi|288560024|ref|YP_003423510.1|	-	0.088	12.9	0.0	0.33	11.0	0.0	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
MazG-like	PF12643.7	gi|288560024|ref|YP_003423510.1|	-	0.25	11.6	2.4	17	5.7	0.1	2.9	1	1	1	2	2	2	0	MazG-like	family
DUF4834	PF16118.5	gi|288560025|ref|YP_003423511.1|	-	0.022	15.7	0.0	0.027	15.4	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4834)
TRAP_alpha	PF03896.16	gi|288560025|ref|YP_003423511.1|	-	0.025	13.8	2.6	0.028	13.6	2.6	1.0	1	0	0	1	1	1	0	Translocon-associated	protein	(TRAP),	alpha	subunit
SID-1_RNA_chan	PF13965.6	gi|288560025|ref|YP_003423511.1|	-	0.19	10.1	0.1	0.22	9.9	0.1	1.0	1	0	0	1	1	1	0	dsRNA-gated	channel	SID-1
PPP4R2	PF09184.11	gi|288560025|ref|YP_003423511.1|	-	0.46	10.0	11.8	0.49	9.9	11.8	1.1	1	0	0	1	1	1	0	PPP4R2
NOA36	PF06524.12	gi|288560025|ref|YP_003423511.1|	-	0.74	9.1	19.0	0.82	8.9	19.0	1.0	1	0	0	1	1	1	0	NOA36	protein
FAM176	PF14851.6	gi|288560025|ref|YP_003423511.1|	-	0.84	9.3	7.3	1.4	8.6	7.3	1.4	1	1	0	1	1	1	0	FAM176	family
DUF2076	PF09849.9	gi|288560025|ref|YP_003423511.1|	-	6.9	6.6	20.4	7.4	6.5	20.4	1.0	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2076)
SurA_N_3	PF13624.6	gi|288560026|ref|YP_003423512.1|	-	0.037	13.8	0.1	0.055	13.3	0.1	1.2	1	0	0	1	1	1	0	SurA	N-terminal	domain
Glyoxalase_2	PF12681.7	gi|288560026|ref|YP_003423512.1|	-	0.051	13.5	0.3	0.11	12.4	0.3	1.5	1	0	0	1	1	1	0	Glyoxalase-like	domain
RNase_T	PF00929.24	gi|288560027|ref|YP_003423513.1|	-	1.3e-21	77.8	0.1	1.8e-21	77.4	0.1	1.2	1	0	0	1	1	1	1	Exonuclease
RNase_H_2	PF13482.6	gi|288560027|ref|YP_003423513.1|	-	0.00036	20.6	0.2	0.0021	18.1	0.2	2.0	1	1	0	1	1	1	1	RNase_H	superfamily
DZR	PF12773.7	gi|288560027|ref|YP_003423513.1|	-	0.011	15.7	0.3	0.019	15.0	0.3	1.4	1	0	0	1	1	1	0	Double	zinc	ribbon
RNA_POL_M_15KD	PF02150.16	gi|288560027|ref|YP_003423513.1|	-	0.03	14.2	0.3	0.03	14.2	0.3	2.1	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
Prok-RING_1	PF14446.6	gi|288560027|ref|YP_003423513.1|	-	0.053	13.5	0.7	0.092	12.7	0.7	1.3	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
PHD	PF00628.29	gi|288560027|ref|YP_003423513.1|	-	0.095	12.6	0.5	0.22	11.5	0.5	1.6	1	0	0	1	1	1	0	PHD-finger
zinc-ribbons_6	PF07191.12	gi|288560027|ref|YP_003423513.1|	-	0.1	12.6	0.8	0.18	11.8	0.8	1.3	1	0	0	1	1	1	0	zinc-ribbons
zinc_ribbon_15	PF17032.5	gi|288560027|ref|YP_003423513.1|	-	0.23	12.2	2.9	0.42	11.4	2.9	1.5	1	0	0	1	1	1	0	zinc-ribbon	family
Abhydrolase_1	PF00561.20	gi|288560028|ref|YP_003423514.1|	-	3.2e-17	63.0	0.0	3.9e-17	62.8	0.0	1.1	1	0	0	1	1	1	1	alpha/beta	hydrolase	fold
Abhydrolase_6	PF12697.7	gi|288560028|ref|YP_003423514.1|	-	5e-09	37.1	0.0	9.8e-09	36.1	0.0	1.5	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Hydrolase_4	PF12146.8	gi|288560028|ref|YP_003423514.1|	-	2.3e-08	33.6	0.0	3.7e-08	32.9	0.0	1.3	1	0	0	1	1	1	1	Serine	aminopeptidase,	S33
DUF676	PF05057.14	gi|288560028|ref|YP_003423514.1|	-	0.00092	18.8	0.1	0.0024	17.4	0.1	1.6	1	0	0	1	1	1	1	Putative	serine	esterase	(DUF676)
BAAT_C	PF08840.11	gi|288560028|ref|YP_003423514.1|	-	0.012	15.5	0.0	0.021	14.8	0.0	1.4	1	0	0	1	1	1	0	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
Palm_thioest	PF02089.15	gi|288560028|ref|YP_003423514.1|	-	0.059	13.2	0.0	0.084	12.7	0.0	1.3	1	0	0	1	1	1	0	Palmitoyl	protein	thioesterase
Lipase_2	PF01674.18	gi|288560028|ref|YP_003423514.1|	-	0.06	12.9	0.0	0.1	12.1	0.0	1.4	1	0	0	1	1	1	0	Lipase	(class	2)
LIDHydrolase	PF10230.9	gi|288560028|ref|YP_003423514.1|	-	0.067	12.7	1.4	0.21	11.1	0.1	2.0	2	0	0	2	2	2	0	Lipid-droplet	associated	hydrolase
Lipase_GDSL_3	PF14606.6	gi|288560028|ref|YP_003423514.1|	-	0.091	12.9	0.0	2.2	8.4	0.0	2.3	2	0	0	2	2	2	0	GDSL-like	Lipase/Acylhydrolase	family
Thioesterase	PF00975.20	gi|288560028|ref|YP_003423514.1|	-	0.095	12.8	0.0	0.16	12.0	0.0	1.3	1	0	0	1	1	1	0	Thioesterase	domain
Lectin_like	PF18560.1	gi|288560029|ref|YP_003423515.1|	-	1e-15	58.2	3.2	9.4e-15	55.1	3.2	2.8	1	1	0	1	1	1	1	Lectin	like	domain
Big_3_5	PF16640.5	gi|288560029|ref|YP_003423515.1|	-	1.4e-15	57.2	15.7	2e-10	40.7	9.8	3.4	3	0	0	3	3	3	2	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|288560029|ref|YP_003423515.1|	-	7e-13	48.4	8.9	6.6e-08	32.5	6.1	2.8	2	0	0	2	2	2	2	Bacterial	Ig-like	domain	(group	1)
Invasin_D3	PF09134.10	gi|288560029|ref|YP_003423515.1|	-	7.6e-11	42.2	11.5	3.8e-07	30.3	6.8	2.9	2	0	0	2	2	2	2	Invasin,	domain	3
MG4	PF17789.1	gi|288560029|ref|YP_003423515.1|	-	9.9e-08	32.0	1.0	0.0045	17.1	0.0	3.0	2	0	0	2	2	2	2	Macroglobulin	domain	MG4
CarboxypepD_reg	PF13620.6	gi|288560029|ref|YP_003423515.1|	-	1.9e-06	28.1	6.5	0.00078	19.7	2.9	2.6	2	0	0	2	2	2	2	Carboxypeptidase	regulatory-like	domain
Peptidase_C1	PF00112.23	gi|288560029|ref|YP_003423515.1|	-	8e-05	22.8	0.0	0.00043	20.4	0.0	2.3	2	0	0	2	2	2	1	Papain	family	cysteine	protease
Big_9	PF17963.1	gi|288560029|ref|YP_003423515.1|	-	0.66	10.7	9.0	0.41	11.4	3.1	3.5	2	1	0	2	2	2	0	Bacterial	Ig	domain
Aldo_ket_red	PF00248.21	gi|288560030|ref|YP_003423516.1|	-	8.7e-41	140.0	0.0	9.9e-40	136.6	0.0	2.0	1	1	0	1	1	1	1	Aldo/keto	reductase	family
Fer4_9	PF13187.6	gi|288560030|ref|YP_003423516.1|	-	1.5e-08	34.6	5.3	3.1e-08	33.6	5.3	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|288560030|ref|YP_003423516.1|	-	7e-08	32.9	5.6	1.6e-07	31.8	5.6	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|288560030|ref|YP_003423516.1|	-	8.9e-08	32.3	5.7	0.0018	18.5	0.4	2.8	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|288560030|ref|YP_003423516.1|	-	1.3e-06	28.9	4.7	3.4e-06	27.5	4.7	1.8	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|288560030|ref|YP_003423516.1|	-	2.3e-06	27.9	3.4	5.2e-06	26.8	3.4	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|288560030|ref|YP_003423516.1|	-	3.3e-06	27.1	5.1	7.2e-06	26.0	5.1	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|288560030|ref|YP_003423516.1|	-	0.0025	17.5	14.1	0.038	13.8	4.2	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_20	PF14691.6	gi|288560030|ref|YP_003423516.1|	-	0.0028	17.4	8.9	0.012	15.4	1.5	2.6	1	1	1	2	2	2	1	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_21	PF14697.6	gi|288560030|ref|YP_003423516.1|	-	0.013	15.6	8.7	0.12	12.5	0.7	2.6	3	0	0	3	3	3	0	4Fe-4S	dicluster	domain
DUF4145	PF13643.6	gi|288560030|ref|YP_003423516.1|	-	0.086	13.0	0.1	0.87	9.8	0.0	2.6	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4145)
Fer4_2	PF12797.7	gi|288560030|ref|YP_003423516.1|	-	0.15	12.2	14.8	0.42	10.8	3.0	2.7	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|288560030|ref|YP_003423516.1|	-	0.44	10.7	14.5	2.1	8.5	3.5	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|288560030|ref|YP_003423516.1|	-	1.6	9.7	17.4	2.2	9.3	4.0	2.7	2	1	2	4	4	3	0	4Fe-4S	double	cluster	binding	domain
Fer4_3	PF12798.7	gi|288560030|ref|YP_003423516.1|	-	3.2	8.9	12.1	6.5	7.9	2.2	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
zf-CXXC	PF02008.20	gi|288560030|ref|YP_003423516.1|	-	4.4	7.4	9.5	11	6.2	2.2	2.5	2	0	0	2	2	2	0	CXXC	zinc	finger	domain
Fer4_4	PF12800.7	gi|288560030|ref|YP_003423516.1|	-	9.2	7.1	14.6	6.1	7.6	2.5	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
CBFD_NFYB_HMF	PF00808.23	gi|288560031|ref|YP_003423517.1|	-	3.1e-15	56.2	2.0	3.4e-15	56.1	2.0	1.0	1	0	0	1	1	1	1	Histone-like	transcription	factor	(CBF/NF-Y)	and	archaeal	histone
Histone	PF00125.24	gi|288560031|ref|YP_003423517.1|	-	4.1e-07	30.4	0.1	4.9e-07	30.2	0.1	1.0	1	0	0	1	1	1	1	Core	histone	H2A/H2B/H3/H4
CENP-S	PF15630.6	gi|288560031|ref|YP_003423517.1|	-	8.6e-06	26.0	0.1	9e-06	26.0	0.1	1.1	1	0	0	1	1	1	1	CENP-S	protein
TAF	PF02969.17	gi|288560031|ref|YP_003423517.1|	-	8.1e-05	22.7	0.4	8.8e-05	22.6	0.4	1.1	1	0	0	1	1	1	1	TATA	box	binding	protein	associated	factor	(TAF)
CENP-T_C	PF15511.6	gi|288560031|ref|YP_003423517.1|	-	0.0023	18.0	0.1	0.0024	18.0	0.1	1.1	1	0	0	1	1	1	1	Centromere	kinetochore	component	CENP-T	histone	fold
Bromo_TP	PF07524.13	gi|288560031|ref|YP_003423517.1|	-	0.013	15.5	0.0	0.014	15.4	0.0	1.0	1	0	0	1	1	1	0	Bromodomain	associated
DUF1931	PF09123.11	gi|288560031|ref|YP_003423517.1|	-	0.05	13.7	0.9	0.056	13.6	0.9	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1931)
HK97-gp10_like	PF04883.12	gi|288560031|ref|YP_003423517.1|	-	0.071	14.1	2.8	0.12	13.4	2.8	1.4	1	1	1	2	2	2	0	Bacteriophage	HK97-gp10,	putative	tail-component
Bromo_TP_like	PF17027.5	gi|288560031|ref|YP_003423517.1|	-	0.12	12.5	0.0	0.12	12.5	0.0	1.0	1	0	0	1	1	1	0	Histone-fold	protein
PCP_red	PF08369.10	gi|288560031|ref|YP_003423517.1|	-	0.24	11.7	4.1	1.2	9.4	1.5	2.7	1	1	1	2	2	2	0	Proto-chlorophyllide	reductase	57	kD	subunit
Chlam_PMP	PF02415.17	gi|288560032|ref|YP_003423518.1|	-	0.0046	17.4	0.4	0.0046	17.4	0.4	9.4	9	2	0	9	9	9	5	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
Fil_haemagg	PF05594.14	gi|288560032|ref|YP_003423518.1|	-	0.027	15.0	2.3	0.027	15.0	2.3	6.6	3	2	3	6	6	6	0	Haemagluttinin	repeat
GGACT	PF06094.12	gi|288560033|ref|YP_003423519.1|	-	3.4e-25	89.0	0.5	2.2e-24	86.4	0.1	2.2	2	0	0	2	2	2	1	Gamma-glutamyl	cyclotransferase,	AIG2-like
DDE_Tnp_1	PF01609.21	gi|288560034|ref|YP_003423520.1|	-	1.4e-14	54.3	0.7	2.1e-14	53.7	0.7	1.3	1	0	0	1	1	1	1	Transposase	DDE	domain
DUF3589	PF12141.8	gi|288560034|ref|YP_003423520.1|	-	0.012	14.2	3.3	0.027	13.1	0.6	2.2	2	0	0	2	2	2	0	Beta-mannosyltransferases
DUF3173	PF11372.8	gi|288560034|ref|YP_003423520.1|	-	0.041	13.7	2.1	0.35	10.8	0.4	2.9	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF3173)
Staphylokinase	PF02821.16	gi|288560034|ref|YP_003423520.1|	-	0.1	13.1	0.1	0.1	13.1	0.1	3.1	2	1	1	3	3	3	0	Staphylokinase/Streptokinase	family
ResIII	PF04851.15	gi|288560035|ref|YP_003423521.1|	-	4.2e-33	114.7	0.1	9.9e-33	113.5	0.1	1.7	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
PLDc_2	PF13091.6	gi|288560035|ref|YP_003423521.1|	-	4.9e-16	58.8	0.3	1.4e-15	57.4	0.3	1.8	1	0	0	1	1	1	1	PLD-like	domain
Helicase_C	PF00271.31	gi|288560035|ref|YP_003423521.1|	-	4.4e-12	46.3	0.3	5e-11	42.9	0.0	2.9	3	0	0	3	3	3	1	Helicase	conserved	C-terminal	domain
DEAD	PF00270.29	gi|288560035|ref|YP_003423521.1|	-	1.5e-06	28.1	0.0	3.3e-06	27.0	0.0	1.5	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
SWI2_SNF2	PF18766.1	gi|288560035|ref|YP_003423521.1|	-	1.9e-06	27.7	0.2	3.5e-06	26.8	0.2	1.4	1	0	0	1	1	1	1	SWI2/SNF2	ATPase
PP_kinase_C	PF13090.6	gi|288560035|ref|YP_003423521.1|	-	0.013	15.0	0.1	0.07	12.6	0.1	2.0	1	1	0	1	1	1	0	Polyphosphate	kinase	C-terminal	domain	2
ATP-grasp_6	PF18419.1	gi|288560035|ref|YP_003423521.1|	-	0.62	9.7	4.8	47	3.7	0.0	4.2	5	0	0	5	5	5	0	ATP-grasp-like	domain
Methyltransf_25	PF13649.6	gi|288560036|ref|YP_003423522.1|	-	3.1e-14	53.4	0.0	6e-14	52.5	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|288560036|ref|YP_003423522.1|	-	9.3e-14	51.9	0.0	1.6e-13	51.1	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|288560036|ref|YP_003423522.1|	-	5.7e-11	42.5	0.0	9.5e-11	41.8	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
TehB	PF03848.14	gi|288560036|ref|YP_003423522.1|	-	3.7e-09	36.3	0.0	5.2e-09	35.8	0.0	1.2	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
Methyltransf_31	PF13847.6	gi|288560036|ref|YP_003423522.1|	-	3.2e-08	33.5	0.0	4.1e-08	33.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|288560036|ref|YP_003423522.1|	-	4e-08	33.9	0.0	7.8e-08	33.0	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
TPMT	PF05724.11	gi|288560036|ref|YP_003423522.1|	-	0.03	14.0	0.0	0.86	9.2	0.0	2.0	1	1	0	1	1	1	0	Thiopurine	S-methyltransferase	(TPMT)
OspE	PF02471.17	gi|288560036|ref|YP_003423522.1|	-	0.043	14.0	0.1	0.068	13.4	0.1	1.4	1	0	0	1	1	1	0	Borrelia	outer	surface	protein	E
P2_N	PF18628.1	gi|288560036|ref|YP_003423522.1|	-	0.1	12.4	0.0	0.58	9.9	0.0	2.0	2	0	0	2	2	2	0	Viral	coat	protein	P2	N-terminal	domain
Methyltransf_15	PF09445.10	gi|288560036|ref|YP_003423522.1|	-	0.13	11.9	0.0	0.22	11.1	0.0	1.3	1	1	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
SAM_MT	PF04445.13	gi|288560036|ref|YP_003423522.1|	-	0.14	11.5	0.0	0.21	11.0	0.0	1.2	1	0	0	1	1	1	0	Putative	SAM-dependent	methyltransferase
MTS	PF05175.14	gi|288560036|ref|YP_003423522.1|	-	0.18	11.3	0.0	0.33	10.5	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	small	domain
DZR	PF12773.7	gi|288560037|ref|YP_003423523.1|	-	1.5e-15	56.9	45.0	8.7e-08	32.1	14.5	2.6	1	1	2	3	3	3	3	Double	zinc	ribbon
zinc_ribbon_2	PF13240.6	gi|288560037|ref|YP_003423523.1|	-	2.6e-13	49.2	37.3	1.6e-05	24.4	5.3	3.7	3	1	0	3	3	3	3	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|288560037|ref|YP_003423523.1|	-	4.4e-08	32.3	30.3	0.0067	15.8	6.0	4.5	3	2	1	4	4	4	4	zinc-ribbon	domain
zinc_ribbon_15	PF17032.5	gi|288560037|ref|YP_003423523.1|	-	1.7e-05	25.5	30.4	0.022	15.5	4.1	3.8	4	0	0	4	4	4	3	zinc-ribbon	family
UPF0547	PF10571.9	gi|288560037|ref|YP_003423523.1|	-	0.0003	20.8	23.0	0.18	12.0	1.8	4.7	3	2	1	4	4	4	3	Uncharacterised	protein	family	UPF0547
zf-NADH-PPase	PF09297.11	gi|288560037|ref|YP_003423523.1|	-	0.00083	19.0	23.4	0.097	12.3	0.1	5.7	5	1	0	5	5	5	2	NADH	pyrophosphatase	zinc	ribbon	domain
zinc-ribbons_6	PF07191.12	gi|288560037|ref|YP_003423523.1|	-	0.0012	18.8	19.1	0.029	14.4	8.3	2.8	1	1	1	2	2	2	2	zinc-ribbons
Nudix_N_2	PF14803.6	gi|288560037|ref|YP_003423523.1|	-	0.027	14.4	29.0	0.53	10.3	5.1	6.2	4	2	1	5	5	5	0	Nudix	N-terminal
DUF2321	PF10083.9	gi|288560037|ref|YP_003423523.1|	-	0.033	13.8	13.8	1.6	8.3	13.8	2.5	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2321)
TF_Zn_Ribbon	PF08271.12	gi|288560037|ref|YP_003423523.1|	-	0.034	13.6	25.2	0.12	11.9	2.0	5.0	3	2	0	3	3	3	0	TFIIB	zinc-binding
polyprenyl_synt	PF00348.17	gi|288560037|ref|YP_003423523.1|	-	0.049	12.7	1.6	0.071	12.2	1.6	1.1	1	0	0	1	1	1	0	Polyprenyl	synthetase
OrfB_Zn_ribbon	PF07282.11	gi|288560037|ref|YP_003423523.1|	-	0.049	13.6	2.9	0.049	13.6	2.9	4.2	2	2	1	3	3	3	0	Putative	transposase	DNA-binding	domain
tRNA-synt_1g	PF09334.11	gi|288560037|ref|YP_003423523.1|	-	0.22	10.2	16.4	23	3.6	15.7	2.5	1	1	0	1	1	1	0	tRNA	synthetases	class	I	(M)
A2L_zn_ribbon	PF08792.10	gi|288560037|ref|YP_003423523.1|	-	0.59	9.9	27.9	3.8	7.4	4.7	5.6	4	2	0	4	4	4	0	A2L	zinc	ribbon	domain
zf-RING_7	PF02591.15	gi|288560037|ref|YP_003423523.1|	-	0.85	9.9	19.3	1.9	8.7	0.1	6.1	6	0	0	6	6	6	0	C4-type	zinc	ribbon	domain
PolC_DP2	PF03833.13	gi|288560037|ref|YP_003423523.1|	-	1.3	6.8	22.7	0.016	13.1	4.7	2.6	1	1	2	3	3	3	0	DNA	polymerase	II	large	subunit	DP2
YhfH	PF14149.6	gi|288560037|ref|YP_003423523.1|	-	2.5	8.2	25.7	2.1	8.4	0.9	5.6	2	2	3	5	5	5	0	YhfH-like	protein
Membralin	PF09746.9	gi|288560037|ref|YP_003423523.1|	-	2.8	6.9	6.4	3.1	6.7	6.4	1.1	1	0	0	1	1	1	0	Tumour-associated	protein
zf_UBZ	PF18439.1	gi|288560037|ref|YP_003423523.1|	-	5	6.8	28.6	6	6.6	0.2	6.1	2	2	4	6	6	6	0	Ubiquitin-Binding	Zinc	Finger
Zn-ribbon_8	PF09723.10	gi|288560037|ref|YP_003423523.1|	-	5.4	7.2	32.6	0.62	10.2	3.8	5.6	1	1	4	5	5	5	0	Zinc	ribbon	domain
NOB1_Zn_bind	PF08772.11	gi|288560037|ref|YP_003423523.1|	-	5.4	7.3	30.0	3.5	7.9	4.2	4.4	1	1	3	4	4	4	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
HypA	PF01155.19	gi|288560037|ref|YP_003423523.1|	-	8.1	6.5	27.2	2.2	8.3	3.1	3.8	2	1	2	4	4	4	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
NIF	PF03031.18	gi|288560038|ref|YP_003423524.1|	-	2.4e-05	24.2	0.0	3.2e-05	23.8	0.0	1.2	1	0	0	1	1	1	1	NLI	interacting	factor-like	phosphatase
DZR	PF12773.7	gi|288560038|ref|YP_003423524.1|	-	0.00012	22.1	0.2	0.00018	21.5	0.2	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_2	PF13240.6	gi|288560038|ref|YP_003423524.1|	-	0.005	16.5	2.3	0.0097	15.6	2.3	1.5	1	0	0	1	1	1	1	zinc-ribbon	domain
YhfH	PF14149.6	gi|288560038|ref|YP_003423524.1|	-	0.039	13.9	1.2	0.15	12.1	1.2	2.0	1	0	0	1	1	1	0	YhfH-like	protein
zf-ribbon_3	PF13248.6	gi|288560038|ref|YP_003423524.1|	-	0.19	11.2	1.6	0.31	10.5	1.6	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
MHC_II_alpha	PF00993.20	gi|288560039|ref|YP_003423525.1|	-	0.025	14.3	0.5	0.053	13.2	0.5	1.5	1	0	0	1	1	1	0	Class	II	histocompatibility	antigen,	alpha	domain
TF_Zn_Ribbon	PF08271.12	gi|288560040|ref|YP_003423526.1|	-	0.0037	16.7	2.2	0.12	11.9	0.0	2.8	2	1	0	2	2	2	1	TFIIB	zinc-binding
Rad50_zn_hook	PF04423.14	gi|288560040|ref|YP_003423526.1|	-	0.012	15.4	0.2	0.74	9.7	0.0	2.8	2	1	1	3	3	3	0	Rad50	zinc	hook	motif
RNA_POL_M_15KD	PF02150.16	gi|288560040|ref|YP_003423526.1|	-	0.016	15.0	5.2	0.22	11.5	0.8	3.1	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
DUF4428	PF14471.6	gi|288560040|ref|YP_003423526.1|	-	0.019	14.9	1.2	0.031	14.2	0.2	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4428)
zinc_ribbon_2	PF13240.6	gi|288560040|ref|YP_003423526.1|	-	0.032	14.0	2.0	0.82	9.5	0.1	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
ADK_lid	PF05191.14	gi|288560040|ref|YP_003423526.1|	-	0.045	13.7	0.3	0.13	12.3	0.0	1.9	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
zinc-ribbons_6	PF07191.12	gi|288560040|ref|YP_003423526.1|	-	0.053	13.5	4.1	0.98	9.4	0.2	2.4	1	1	1	2	2	2	0	zinc-ribbons
DZR	PF12773.7	gi|288560040|ref|YP_003423526.1|	-	0.082	12.9	3.0	0.48	10.5	3.0	2.1	1	1	0	1	1	1	0	Double	zinc	ribbon
zf-ribbon_3	PF13248.6	gi|288560040|ref|YP_003423526.1|	-	0.083	12.3	0.2	0.083	12.3	0.2	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
Zn_ribbon_SprT	PF17283.2	gi|288560040|ref|YP_003423526.1|	-	0.11	12.4	4.0	1.1	9.2	1.1	2.5	2	0	0	2	2	2	0	SprT-like	zinc	ribbon	domain
Zn-ribbon_8	PF09723.10	gi|288560040|ref|YP_003423526.1|	-	1.7	8.8	8.9	0.47	10.6	0.3	2.6	2	1	0	2	2	2	0	Zinc	ribbon	domain
Fis1_TPR_C	PF14853.6	gi|288560041|ref|YP_003423527.1|	-	0.012	15.7	0.1	0.016	15.2	0.1	1.3	1	0	0	1	1	1	0	Fis1	C-terminal	tetratricopeptide	repeat
TPR_1	PF00515.28	gi|288560041|ref|YP_003423527.1|	-	0.013	15.3	0.5	0.017	15.0	0.5	1.2	1	0	0	1	1	1	0	Tetratricopeptide	repeat
Alkyl_sulf_dimr	PF14863.6	gi|288560041|ref|YP_003423527.1|	-	0.034	14.6	0.0	0.034	14.6	0.0	1.0	1	0	0	1	1	1	0	Alkyl	sulfatase	dimerisation
TPR_2	PF07719.17	gi|288560041|ref|YP_003423527.1|	-	0.05	13.7	0.2	0.062	13.4	0.2	1.2	1	0	0	1	1	1	0	Tetratricopeptide	repeat
GGACT	PF06094.12	gi|288560042|ref|YP_003423528.1|	-	2.7e-24	86.1	0.2	2.5e-23	83.0	0.0	2.1	2	0	0	2	2	2	1	Gamma-glutamyl	cyclotransferase,	AIG2-like
AIG2_2	PF13772.6	gi|288560042|ref|YP_003423528.1|	-	0.16	12.3	0.0	27	5.2	0.0	2.4	2	0	0	2	2	2	0	AIG2-like	family
HEPN_Apea	PF18739.1	gi|288560043|ref|YP_003423529.1|	-	3.5e-06	27.4	1.0	3.5e-06	27.4	1.0	1.7	2	1	0	2	2	2	1	Apea-like	HEPN
GGACT	PF06094.12	gi|288560043|ref|YP_003423529.1|	-	0.009	16.6	0.1	0.024	15.2	0.0	1.7	2	0	0	2	2	2	1	Gamma-glutamyl	cyclotransferase,	AIG2-like
CRISPR_Cas9_WED	PF18061.1	gi|288560044|ref|YP_003423530.1|	-	0.031	14.4	0.1	0.04	14.0	0.1	1.1	1	0	0	1	1	1	0	CRISPR-Cas9	WED	domain
LPAM_1	PF08139.12	gi|288560044|ref|YP_003423530.1|	-	0.18	12.3	1.3	0.34	11.5	1.3	1.4	1	0	0	1	1	1	0	Prokaryotic	membrane	lipoprotein	lipid	attachment	site
bPH_3	PF14470.6	gi|288560045|ref|YP_003423531.1|	-	0.00043	20.6	1.4	0.00078	19.8	0.6	1.8	2	0	0	2	2	2	1	Bacterial	PH	domain
Vps36_ESCRT-II	PF11605.8	gi|288560045|ref|YP_003423531.1|	-	0.0064	16.6	0.3	0.018	15.2	0.3	1.8	1	0	0	1	1	1	1	Vacuolar	protein	sorting	protein	36	Vps36
Pox_E10	PF04805.12	gi|288560045|ref|YP_003423531.1|	-	0.014	15.2	2.4	0.015	15.1	0.6	2.0	2	0	0	2	2	2	0	E10-like	protein	conserved	region
Elf1	PF05129.13	gi|288560045|ref|YP_003423531.1|	-	0.03	14.3	0.8	0.1	12.6	0.3	2.0	2	0	0	2	2	2	0	Transcription	elongation	factor	Elf1	like
Ion_trans_2	PF07885.16	gi|288560046|ref|YP_003423532.1|	-	1.6e-10	40.8	12.1	1.6e-10	40.8	12.1	2.2	3	0	0	3	3	3	1	Ion	channel
Ion_trans	PF00520.31	gi|288560046|ref|YP_003423532.1|	-	3.8e-07	29.6	26.2	1.3e-06	27.8	26.2	1.8	1	1	0	1	1	1	1	Ion	transport	protein
UPF0242	PF06785.11	gi|288560046|ref|YP_003423532.1|	-	0.0015	18.7	0.4	0.0021	18.2	0.4	1.4	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0242)	N-terminus
YscO-like	PF16789.5	gi|288560046|ref|YP_003423532.1|	-	0.0055	16.8	5.3	0.0075	16.3	5.3	1.2	1	0	0	1	1	1	1	YscO-like	protein
Spc7	PF08317.11	gi|288560046|ref|YP_003423532.1|	-	0.021	13.7	10.7	0.028	13.3	10.7	1.1	1	0	0	1	1	1	0	Spc7	kinetochore	protein
IRK	PF01007.20	gi|288560046|ref|YP_003423532.1|	-	0.045	13.6	1.5	0.077	12.8	0.9	1.7	1	1	0	1	1	1	0	Inward	rectifier	potassium	channel	transmembrane	domain
Laminin_II	PF06009.12	gi|288560046|ref|YP_003423532.1|	-	0.061	13.3	4.2	0.097	12.7	4.2	1.4	1	0	0	1	1	1	0	Laminin	Domain	II
Halogen_Hydrol	PF10112.9	gi|288560046|ref|YP_003423532.1|	-	0.26	11.3	9.9	0.11	12.5	3.0	3.0	2	2	0	2	2	2	0	5-bromo-4-chloroindolyl	phosphate	hydrolysis	protein
TMF_TATA_bd	PF12325.8	gi|288560046|ref|YP_003423532.1|	-	0.33	11.2	10.3	0.49	10.6	10.3	1.2	1	0	0	1	1	1	0	TATA	element	modulatory	factor	1	TATA	binding
FlaC_arch	PF05377.11	gi|288560046|ref|YP_003423532.1|	-	0.64	10.5	8.0	1.5	9.2	8.0	1.7	1	1	0	1	1	1	0	Flagella	accessory	protein	C	(FlaC)
Atg14	PF10186.9	gi|288560046|ref|YP_003423532.1|	-	0.71	8.9	5.0	1.1	8.2	5.0	1.3	1	0	0	1	1	1	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
DUF1664	PF07889.12	gi|288560046|ref|YP_003423532.1|	-	0.95	9.5	4.0	0.21	11.7	0.9	1.6	2	0	0	2	2	1	0	Protein	of	unknown	function	(DUF1664)
YabA	PF06156.13	gi|288560046|ref|YP_003423532.1|	-	1.2	9.9	8.7	1.8	9.3	8.7	1.3	1	0	0	1	1	1	0	Initiation	control	protein	YabA
Swi5	PF07061.11	gi|288560046|ref|YP_003423532.1|	-	1.4	9.0	9.8	0.65	10.1	7.3	1.6	2	0	0	2	2	2	0	Swi5
XhlA	PF10779.9	gi|288560046|ref|YP_003423532.1|	-	2.6	8.3	9.8	8.1	6.7	9.8	1.9	1	0	0	1	1	1	0	Haemolysin	XhlA
DivIC	PF04977.15	gi|288560046|ref|YP_003423532.1|	-	4	7.3	10.6	1.4	8.7	7.3	2.0	2	0	0	2	2	2	0	Septum	formation	initiator
Sec20	PF03908.13	gi|288560046|ref|YP_003423532.1|	-	8.4	6.4	8.0	11	6.0	2.1	2.5	2	0	0	2	2	2	0	Sec20
zinc_ribbon_2	PF13240.6	gi|288560047|ref|YP_003423533.1|	-	4.4e-09	35.8	3.4	1.1e-08	34.5	3.4	1.7	1	0	0	1	1	1	1	zinc-ribbon	domain
SHOCT	PF09851.9	gi|288560047|ref|YP_003423533.1|	-	6.7e-09	35.2	6.0	1.7e-08	33.9	6.0	1.8	1	0	0	1	1	1	1	Short	C-terminal	domain
DZR	PF12773.7	gi|288560047|ref|YP_003423533.1|	-	1.7e-05	24.7	0.7	3.1e-05	23.9	0.7	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-ribbon_3	PF13248.6	gi|288560047|ref|YP_003423533.1|	-	2.6e-05	23.5	2.8	4.8e-05	22.6	2.8	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
zinc_ribbon_15	PF17032.5	gi|288560047|ref|YP_003423533.1|	-	0.017	15.8	3.2	0.045	14.5	3.2	1.8	1	0	0	1	1	1	0	zinc-ribbon	family
EF-hand_8	PF13833.6	gi|288560047|ref|YP_003423533.1|	-	0.032	14.1	0.4	0.42	10.5	0.1	2.5	2	0	0	2	2	2	0	EF-hand	domain	pair
Nudix_N_2	PF14803.6	gi|288560047|ref|YP_003423533.1|	-	0.055	13.4	0.4	13	5.8	0.0	2.4	2	0	0	2	2	2	0	Nudix	N-terminal
EF-hand_7	PF13499.6	gi|288560047|ref|YP_003423533.1|	-	0.066	13.7	1.7	3.9	8.0	0.4	3.2	2	1	0	2	2	2	0	EF-hand	domain	pair
Nucleoporin_FG	PF13634.6	gi|288560047|ref|YP_003423533.1|	-	1.7	9.6	7.0	0.63	10.9	3.6	1.9	2	0	0	2	2	2	0	Nucleoporin	FG	repeat	region
DUF2072	PF09845.9	gi|288560047|ref|YP_003423533.1|	-	3.1	8.1	11.5	0.075	13.3	3.4	2.3	2	1	0	2	2	2	0	Zn-ribbon	containing	protein
Ada_Zn_binding	PF02805.16	gi|288560048|ref|YP_003423534.1|	-	6.9e-08	32.4	0.2	1.1e-07	31.7	0.2	1.3	1	0	0	1	1	1	1	Metal	binding	domain	of	Ada
Macoilin	PF09726.9	gi|288560048|ref|YP_003423534.1|	-	3.4	6.1	4.3	4.1	5.9	4.3	1.0	1	0	0	1	1	1	0	Macoilin	family
Cas_Cas6	PF01881.16	gi|288560049|ref|YP_003423535.1|	-	1.1e-32	113.6	0.8	1.1e-32	113.6	0.8	1.8	2	0	0	2	2	2	1	CRISPR	associated	protein	Cas6
Mrx7	PF10906.8	gi|288560049|ref|YP_003423535.1|	-	0.07	13.4	0.7	0.15	12.3	0.7	1.5	1	0	0	1	1	1	0	MIOREX	complex	component	7
Cas_Cas7	PF05107.12	gi|288560051|ref|YP_003423537.1|	-	1.1e-43	149.6	1.0	1.4e-43	149.3	1.0	1.1	1	0	0	1	1	1	1	CRISPR-associated	protein	Cas7
Chromo_shadow	PF01393.19	gi|288560051|ref|YP_003423537.1|	-	0.04	14.0	0.2	0.12	12.5	0.1	1.8	1	1	0	1	1	1	0	Chromo	shadow	domain
Cas_Cas5d	PF09704.10	gi|288560052|ref|YP_003423538.1|	-	4.7e-06	26.6	0.0	2.1e-05	24.5	0.0	1.8	2	0	0	2	2	2	1	CRISPR-associated	protein	(Cas_Cas5)
ResIII	PF04851.15	gi|288560053|ref|YP_003423539.1|	-	3.1e-10	40.3	1.8	1.9e-09	37.8	0.1	2.7	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.31	gi|288560053|ref|YP_003423539.1|	-	1.8e-08	34.7	0.7	1.8e-08	34.7	0.7	2.9	2	1	0	2	2	2	1	Helicase	conserved	C-terminal	domain
DEAD	PF00270.29	gi|288560053|ref|YP_003423539.1|	-	2e-08	34.2	0.0	6.9e-08	32.5	0.0	1.9	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
PhoH	PF02562.16	gi|288560053|ref|YP_003423539.1|	-	1.1e-06	28.2	0.0	9.2e-05	22.0	0.0	2.3	2	0	0	2	2	2	1	PhoH-like	protein
HD_6	PF18019.1	gi|288560053|ref|YP_003423539.1|	-	0.001	19.2	0.0	0.0016	18.6	0.0	1.3	1	0	0	1	1	1	1	HD	domain
Cas_Cas4	PF01930.17	gi|288560054|ref|YP_003423540.1|	-	8e-54	182.1	7.0	9e-54	181.9	7.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF83
PDDEXK_1	PF12705.7	gi|288560054|ref|YP_003423540.1|	-	6.7e-06	26.2	1.7	1e-05	25.6	0.9	1.6	1	1	0	2	2	2	1	PD-(D/E)XK	nuclease	superfamily
Cas_Cas1	PF01867.16	gi|288560055|ref|YP_003423541.1|	-	5.2e-89	298.1	0.8	6.1e-89	297.9	0.8	1.0	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas1
DUF5603	PF18231.1	gi|288560055|ref|YP_003423541.1|	-	0.07	13.4	0.2	0.17	12.2	0.2	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5603)
CRISPR_Cas2	PF09827.9	gi|288560056|ref|YP_003423542.1|	-	2.9e-20	72.2	0.8	3.3e-20	72.1	0.8	1.1	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas2
DUF1040	PF06288.13	gi|288560056|ref|YP_003423542.1|	-	0.0074	16.6	0.6	0.014	15.7	0.5	1.6	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1040)
TPR_1	PF00515.28	gi|288560057|ref|YP_003423543.1|	-	1.3e-08	34.3	0.4	0.0017	18.1	0.2	2.6	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|288560057|ref|YP_003423543.1|	-	4.9e-08	32.6	0.7	0.0064	16.6	0.0	2.8	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|288560057|ref|YP_003423543.1|	-	7.2e-06	25.7	0.1	0.014	15.4	0.1	2.5	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|288560057|ref|YP_003423543.1|	-	0.0036	17.6	0.0	0.021	15.1	0.0	1.9	1	1	1	2	2	2	2	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|288560057|ref|YP_003423543.1|	-	0.014	15.9	0.0	0.59	10.7	0.0	2.3	2	0	0	2	2	2	0	Tetratricopeptide	repeat
SNAP	PF14938.6	gi|288560057|ref|YP_003423543.1|	-	0.016	14.7	0.0	0.021	14.3	0.0	1.2	1	0	0	1	1	1	0	Soluble	NSF	attachment	protein,	SNAP
TPR_MalT	PF17874.1	gi|288560057|ref|YP_003423543.1|	-	0.28	10.5	0.0	0.39	10.1	0.0	1.1	1	0	0	1	1	1	0	MalT-like	TPR	region
zf-ribbon_3	PF13248.6	gi|288560058|ref|YP_003423544.1|	-	1.7e-10	39.9	12.2	3.2e-05	23.2	0.6	2.8	2	1	0	2	2	2	2	zinc-ribbon	domain
DZR	PF12773.7	gi|288560058|ref|YP_003423544.1|	-	1.8e-09	37.4	13.0	1.3e-06	28.4	6.9	2.1	1	1	1	2	2	2	2	Double	zinc	ribbon
zinc_ribbon_2	PF13240.6	gi|288560058|ref|YP_003423544.1|	-	4.1e-08	32.7	13.1	0.0002	20.9	3.2	3.1	2	1	1	3	3	3	3	zinc-ribbon	domain
zinc-ribbons_6	PF07191.12	gi|288560058|ref|YP_003423544.1|	-	1e-05	25.4	4.2	0.0015	18.5	1.6	2.1	1	1	1	2	2	2	2	zinc-ribbons
UPF0547	PF10571.9	gi|288560058|ref|YP_003423544.1|	-	1.3e-05	25.1	16.2	0.0046	17.0	3.4	3.3	3	1	0	3	3	3	2	Uncharacterised	protein	family	UPF0547
DNA_ligase_ZBD	PF03119.16	gi|288560058|ref|YP_003423544.1|	-	9e-05	22.4	8.2	1.1	9.3	0.1	4.1	4	0	0	4	4	4	1	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-C4_Topoisom	PF01396.19	gi|288560058|ref|YP_003423544.1|	-	0.00025	20.8	10.1	0.98	9.3	0.2	4.0	4	0	0	4	4	4	1	Topoisomerase	DNA	binding	C4	zinc	finger
zf-ISL3	PF14690.6	gi|288560058|ref|YP_003423544.1|	-	0.00025	21.7	7.8	6.2	7.6	0.1	4.0	4	0	0	4	4	4	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Ogr_Delta	PF04606.12	gi|288560058|ref|YP_003423544.1|	-	0.00035	20.5	9.3	1.6	8.8	0.3	4.1	4	0	0	4	4	4	1	Ogr/Delta-like	zinc	finger
Cys_rich_CPXG	PF14255.6	gi|288560058|ref|YP_003423544.1|	-	0.00035	20.4	9.4	0.91	9.5	0.2	4.0	4	0	0	4	4	4	1	Cysteine-rich	CPXCG
DUF35_N	PF12172.8	gi|288560058|ref|YP_003423544.1|	-	0.00041	20.2	15.8	0.046	13.6	3.6	3.4	2	2	1	3	3	3	2	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
YhfH	PF14149.6	gi|288560058|ref|YP_003423544.1|	-	0.00043	20.2	6.8	1.8	8.6	0.8	3.9	2	1	2	4	4	4	1	YhfH-like	protein
zf-Di19	PF05605.12	gi|288560058|ref|YP_003423544.1|	-	0.00051	20.3	13.2	0.02	15.2	3.7	3.4	1	1	3	4	4	4	1	Drought	induced	19	protein	(Di19),	zinc-binding
Zn-ribbon_8	PF09723.10	gi|288560058|ref|YP_003423544.1|	-	0.00068	19.7	14.5	0.55	10.4	2.8	3.8	1	1	1	2	2	2	2	Zinc	ribbon	domain
HypA	PF01155.19	gi|288560058|ref|YP_003423544.1|	-	0.0007	19.6	4.9	0.29	11.1	0.1	2.1	1	1	1	2	2	2	2	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Prok-RING_1	PF14446.6	gi|288560058|ref|YP_003423544.1|	-	0.0012	18.7	11.0	0.021	14.8	0.7	2.4	1	1	0	2	2	2	1	Prokaryotic	RING	finger	family	1
Zn_Tnp_IS1595	PF12760.7	gi|288560058|ref|YP_003423544.1|	-	0.0013	18.7	18.0	1.5	8.9	0.8	4.0	1	1	2	3	3	3	1	Transposase	zinc-ribbon	domain
A2L_zn_ribbon	PF08792.10	gi|288560058|ref|YP_003423544.1|	-	0.0016	18.1	11.0	0.051	13.3	2.0	3.5	2	2	1	3	3	3	1	A2L	zinc	ribbon	domain
zf-C3HC4_3	PF13920.6	gi|288560058|ref|YP_003423544.1|	-	0.002	17.9	6.9	0.024	14.5	0.2	2.9	1	1	2	3	3	3	1	Zinc	finger,	C3HC4	type	(RING	finger)
TF_Zn_Ribbon	PF08271.12	gi|288560058|ref|YP_003423544.1|	-	0.0025	17.3	16.8	0.19	11.3	3.4	3.6	1	1	1	3	3	3	2	TFIIB	zinc-binding
zf-C2H2_4	PF13894.6	gi|288560058|ref|YP_003423544.1|	-	0.0038	17.9	8.9	10	7.3	0.1	4.0	4	0	0	4	4	4	0	C2H2-type	zinc	finger
zf-MYND	PF01753.18	gi|288560058|ref|YP_003423544.1|	-	0.0063	16.6	1.8	1	9.5	1.8	2.3	1	1	0	1	1	1	1	MYND	finger
zinc_ribbon_15	PF17032.5	gi|288560058|ref|YP_003423544.1|	-	0.011	16.5	9.2	0.13	13.1	0.4	2.3	1	1	0	2	2	2	0	zinc-ribbon	family
YacG	PF03884.14	gi|288560058|ref|YP_003423544.1|	-	0.011	15.4	9.9	1.4	8.7	0.1	3.4	2	1	2	4	4	4	0	DNA	gyrase	inhibitor	YacG
PhnA_Zn_Ribbon	PF08274.12	gi|288560058|ref|YP_003423544.1|	-	0.013	15.5	9.1	1.1	9.3	1.2	3.7	3	1	0	3	3	3	0	PhnA	Zinc-Ribbon
DUF1272	PF06906.11	gi|288560058|ref|YP_003423544.1|	-	0.014	15.5	10.5	0.075	13.1	2.3	2.5	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF1272)
PolC_DP2	PF03833.13	gi|288560058|ref|YP_003423544.1|	-	0.015	13.2	1.0	0.016	13.1	1.0	1.0	1	0	0	1	1	1	0	DNA	polymerase	II	large	subunit	DP2
Chordopox_RPO7	PF05864.12	gi|288560058|ref|YP_003423544.1|	-	0.015	15.5	6.0	0.73	10.1	0.4	3.2	1	1	3	4	4	3	0	Chordopoxvirus	DNA-directed	RNA	polymerase	7	kDa	polypeptide	(RPO7)
NMD3	PF04981.13	gi|288560058|ref|YP_003423544.1|	-	0.039	13.4	2.8	1.4	8.3	3.4	1.9	1	1	1	2	2	2	0	NMD3	family
Zn_ribbon_17	PF17120.5	gi|288560058|ref|YP_003423544.1|	-	0.039	13.6	0.8	0.039	13.6	0.8	2.2	1	1	0	2	2	2	0	Zinc-ribbon,	C4HC2	type
zf-CHY	PF05495.12	gi|288560058|ref|YP_003423544.1|	-	0.04	14.4	3.6	0.36	11.3	3.8	1.9	1	1	1	2	2	2	0	CHY	zinc	finger
Zn_ribbon_SprT	PF17283.2	gi|288560058|ref|YP_003423544.1|	-	0.047	13.6	9.4	0.58	10.1	1.3	3.4	3	1	0	3	3	3	0	SprT-like	zinc	ribbon	domain
zinc_ribbon_10	PF10058.9	gi|288560058|ref|YP_003423544.1|	-	0.049	13.4	11.0	2	8.2	0.0	3.8	2	1	2	4	4	4	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
zf_UBZ	PF18439.1	gi|288560058|ref|YP_003423544.1|	-	0.059	13.0	10.2	3.3	7.4	0.2	3.8	1	1	3	4	4	4	0	Ubiquitin-Binding	Zinc	Finger
Nudix_N_2	PF14803.6	gi|288560058|ref|YP_003423544.1|	-	0.066	13.1	11.0	4.5	7.3	0.2	4.0	3	1	0	3	3	3	0	Nudix	N-terminal
Rubredoxin	PF00301.20	gi|288560058|ref|YP_003423544.1|	-	0.073	13.1	11.2	2.6	8.1	0.2	4.0	3	1	1	4	4	4	0	Rubredoxin
PHF5	PF03660.14	gi|288560058|ref|YP_003423544.1|	-	0.083	13.1	3.8	0.094	12.9	3.8	1.1	1	0	0	1	1	1	0	PHF5-like	protein
zf-C2HC5	PF06221.13	gi|288560058|ref|YP_003423544.1|	-	0.11	12.5	10.6	2.4	8.2	1.5	3.5	1	1	2	3	3	3	0	Putative	zinc	finger	motif,	C2HC5-type
Kazal_1	PF00050.21	gi|288560058|ref|YP_003423544.1|	-	0.11	12.5	9.3	0.27	11.3	5.9	2.7	1	1	1	2	2	2	0	Kazal-type	serine	protease	inhibitor	domain
TackOD1	PF18551.1	gi|288560058|ref|YP_003423544.1|	-	0.12	12.0	7.0	1.4	8.6	7.0	2.0	1	1	0	1	1	1	0	Thaumarchaeal	output	domain	1
FAM76	PF16046.5	gi|288560058|ref|YP_003423544.1|	-	0.12	11.7	1.7	0.12	11.7	1.7	1.0	1	0	0	1	1	1	0	FAM76	protein
zf-ACC	PF17848.1	gi|288560058|ref|YP_003423544.1|	-	0.13	12.4	12.9	4.6	7.4	0.4	4.0	4	0	0	4	4	4	0	Acetyl-coA	carboxylase	zinc	finger	domain
zf-LITAF-like	PF10601.9	gi|288560058|ref|YP_003423544.1|	-	0.13	12.5	10.5	3.6	7.9	1.3	3.5	1	1	2	3	3	3	0	LITAF-like	zinc	ribbon	domain
zinc-ribbon_6	PF10005.9	gi|288560058|ref|YP_003423544.1|	-	0.14	12.9	3.8	1	10.1	0.5	2.0	1	1	1	2	2	2	0	zinc-ribbon	domain
HNH_4	PF13395.6	gi|288560058|ref|YP_003423544.1|	-	0.14	12.1	0.2	4.2	7.4	0.0	2.5	2	1	1	3	3	3	0	HNH	endonuclease
DUF1936	PF09151.10	gi|288560058|ref|YP_003423544.1|	-	0.17	11.8	10.6	0.37	10.8	0.0	3.8	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF1936)
Auto_anti-p27	PF06677.12	gi|288560058|ref|YP_003423544.1|	-	0.18	12.0	10.1	0.59	10.3	1.1	3.1	3	0	0	3	3	3	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zinc_ribbon_4	PF13717.6	gi|288560058|ref|YP_003423544.1|	-	0.2	11.6	7.0	24	4.9	0.1	3.9	4	0	0	4	4	4	0	zinc-ribbon	domain
DUF2089	PF09862.9	gi|288560058|ref|YP_003423544.1|	-	0.2	11.7	1.4	11	6.1	0.2	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2089)
zf-RRN7	PF11781.8	gi|288560058|ref|YP_003423544.1|	-	0.21	11.3	13.3	1.9	8.2	0.3	3.9	2	1	3	5	5	5	0	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
zf-CCHC_5	PF14787.6	gi|288560058|ref|YP_003423544.1|	-	0.24	11.2	10.9	11	5.8	0.3	4.0	4	0	0	4	4	4	0	GAG-polyprotein	viral	zinc-finger
TerY_C	PF15616.6	gi|288560058|ref|YP_003423544.1|	-	0.24	11.5	8.5	0.44	10.7	2.9	2.4	1	1	1	2	2	2	0	TerY-C	metal	binding	domain
DUF3268	PF11672.8	gi|288560058|ref|YP_003423544.1|	-	0.27	11.6	7.9	3.1	8.1	2.8	2.8	1	1	1	2	2	2	0	zinc-finger-containing	domain
zinc_ribbon_9	PF14369.6	gi|288560058|ref|YP_003423544.1|	-	0.27	11.5	19.8	2.5	8.4	0.2	4.0	1	1	3	4	4	4	0	zinc-ribbon
Prok-RING_4	PF14447.6	gi|288560058|ref|YP_003423544.1|	-	0.27	11.1	11.2	0.41	10.5	2.4	3.0	1	1	2	3	3	3	0	Prokaryotic	RING	finger	family	4
DUF983	PF06170.12	gi|288560058|ref|YP_003423544.1|	-	0.34	11.3	10.0	1.6	9.2	0.1	3.7	1	1	3	4	4	4	0	Protein	of	unknown	function	(DUF983)
tRNA-synt_1g	PF09334.11	gi|288560058|ref|YP_003423544.1|	-	0.35	9.6	3.6	0.37	9.5	1.5	1.5	1	1	0	1	1	1	0	tRNA	synthetases	class	I	(M)
zf-IS66	PF13005.7	gi|288560058|ref|YP_003423544.1|	-	0.38	11.2	15.7	1.4	9.4	0.4	3.9	1	1	3	4	4	4	0	zinc-finger	binding	domain	of	transposase	IS66
FANCL_C	PF11793.8	gi|288560058|ref|YP_003423544.1|	-	0.39	10.9	0.5	0.39	10.9	0.5	3.6	2	1	2	4	4	4	0	FANCL	C-terminal	domain
zf-BED	PF02892.15	gi|288560058|ref|YP_003423544.1|	-	0.41	10.7	4.3	23	5.1	0.0	3.2	2	2	1	3	3	3	0	BED	zinc	finger
OrfB_Zn_ribbon	PF07282.11	gi|288560058|ref|YP_003423544.1|	-	0.43	10.5	8.8	7.5	6.6	4.0	3.0	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
zf-C2H2	PF00096.26	gi|288560058|ref|YP_003423544.1|	-	0.54	10.8	10.1	12	6.6	0.4	3.9	4	0	0	4	4	4	0	Zinc	finger,	C2H2	type
NRDD	PF13597.6	gi|288560058|ref|YP_003423544.1|	-	0.54	9.0	6.6	3.3	6.4	0.1	2.0	1	1	1	2	2	2	0	Anaerobic	ribonucleoside-triphosphate	reductase
zf-TFIIB	PF13453.6	gi|288560058|ref|YP_003423544.1|	-	0.6	9.5	10.7	9.1	5.7	0.1	3.9	2	1	1	3	3	3	0	Transcription	factor	zinc-finger
DiS_P_DiS	PF06750.13	gi|288560058|ref|YP_003423544.1|	-	0.67	10.1	4.5	6.1	7.0	2.1	2.5	1	1	0	1	1	1	0	Bacterial	Peptidase	A24	N-terminal	domain
zf_Rg	PF17915.1	gi|288560058|ref|YP_003423544.1|	-	0.78	9.2	12.9	1.3	8.5	0.1	3.8	1	1	3	4	4	4	0	Reverse	gyrase	zinc	finger
zf-NADH-PPase	PF09297.11	gi|288560058|ref|YP_003423544.1|	-	0.81	9.4	15.9	1.4	8.6	0.1	4.0	3	1	0	3	3	3	0	NADH	pyrophosphatase	zinc	ribbon	domain
Ribosomal_L32p	PF01783.23	gi|288560058|ref|YP_003423544.1|	-	1	9.7	5.8	8.5	6.7	0.1	2.5	2	1	0	2	2	2	0	Ribosomal	L32p	protein	family
zf-RING_7	PF02591.15	gi|288560058|ref|YP_003423544.1|	-	1.1	9.5	17.1	10	6.4	0.3	4.1	4	0	0	4	4	4	0	C4-type	zinc	ribbon	domain
zf_C2H2_6	PF18450.1	gi|288560058|ref|YP_003423544.1|	-	1.5	8.6	10.7	8.4	6.2	0.0	3.7	3	1	1	4	4	4	0	Zinc	Finger	domain
PriA_CRR	PF18319.1	gi|288560058|ref|YP_003423544.1|	-	1.8	8.6	11.3	5.4	7.1	0.1	3.9	4	0	0	4	4	4	0	PriA	DNA	helicase	Cys-rich	region	(CRR)	domain
Cript	PF10235.9	gi|288560058|ref|YP_003423544.1|	-	2.3	8.9	6.4	34	5.1	0.1	3.5	1	1	3	4	4	4	0	Microtubule-associated	protein	CRIPT
Terminase_GpA	PF05876.12	gi|288560058|ref|YP_003423544.1|	-	2.6	6.5	3.7	3	6.3	3.7	1.1	1	0	0	1	1	1	0	Phage	terminase	large	subunit	(GpA)
DUF1610	PF07754.11	gi|288560058|ref|YP_003423544.1|	-	2.9	7.9	15.8	12	5.9	0.1	4.1	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF1610)
zf-Dof	PF02701.15	gi|288560058|ref|YP_003423544.1|	-	2.9	8.1	0.0	2.9	8.1	0.0	3.1	2	1	2	4	4	3	0	Dof	domain,	zinc	finger
zf-Mss51	PF13824.6	gi|288560058|ref|YP_003423544.1|	-	3	8.0	14.6	26	5.0	7.4	3.1	1	1	1	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
Nop10p	PF04135.12	gi|288560058|ref|YP_003423544.1|	-	3.1	7.9	9.5	20	5.3	0.9	3.7	1	1	2	3	3	3	0	Nucleolar	RNA-binding	protein,	Nop10p	family
DNA_RNApol_7kD	PF03604.13	gi|288560058|ref|YP_003423544.1|	-	3.3	7.5	12.4	29	4.4	1.9	3.5	1	1	2	3	3	3	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
DUF2116	PF09889.9	gi|288560058|ref|YP_003423544.1|	-	3.5	7.7	6.9	10	6.2	0.8	2.4	1	1	2	3	3	3	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
GFA	PF04828.14	gi|288560058|ref|YP_003423544.1|	-	3.8	7.9	7.2	20	5.6	0.1	2.8	1	1	2	3	3	3	0	Glutathione-dependent	formaldehyde-activating	enzyme
TFIIS_C	PF01096.18	gi|288560058|ref|YP_003423544.1|	-	3.9	7.4	11.3	6.9	6.6	0.1	3.7	4	0	0	4	4	4	0	Transcription	factor	S-II	(TFIIS)
Molybdop_Fe4S4	PF04879.16	gi|288560058|ref|YP_003423544.1|	-	4.2	7.4	10.6	25	5.0	0.1	3.9	4	0	0	4	4	4	0	Molybdopterin	oxidoreductase	Fe4S4	domain
Sgf11	PF08209.11	gi|288560058|ref|YP_003423544.1|	-	4.7	6.9	10.7	2.4	7.8	2.0	3.4	2	2	2	4	4	4	0	Sgf11	(transcriptional	regulation	protein)
zf-CHCC	PF10276.9	gi|288560058|ref|YP_003423544.1|	-	7.2	6.8	14.7	4.8	7.3	2.0	3.6	3	1	1	4	4	3	0	Zinc-finger	domain
zf-HYPF	PF07503.12	gi|288560058|ref|YP_003423544.1|	-	9.5	6.1	14.2	7.6	6.4	0.3	3.8	2	1	2	4	4	3	0	HypF	finger
Beta-prism_lec	PF16458.5	gi|288560059|ref|YP_003423545.1|	-	0.1	12.6	0.1	0.16	12.0	0.1	1.3	1	0	0	1	1	1	0	Beta-prism	lectin
DUF2085	PF09858.9	gi|288560062|ref|YP_003423548.1|	-	9.1e-29	99.8	3.1	1.1e-28	99.5	3.1	1.1	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2085)
AIM24	PF01987.17	gi|288560063|ref|YP_003423549.1|	-	5e-60	202.7	0.2	5.7e-60	202.6	0.2	1.0	1	0	0	1	1	1	1	Mitochondrial	biogenesis	AIM24
DUF1947	PF09183.10	gi|288560064|ref|YP_003423550.1|	-	0.00094	19.4	2.9	0.0088	16.3	0.7	2.2	1	1	1	2	2	2	2	Domain	of	unknown	function	(DUF1947)
Helicase_IV_N	PF12462.8	gi|288560064|ref|YP_003423550.1|	-	0.011	15.7	0.5	0.26	11.2	0.2	2.0	1	1	1	2	2	2	0	DNA	helicase	IV	/	RNA	helicase	N	terminal
LemA	PF04011.12	gi|288560064|ref|YP_003423550.1|	-	0.023	14.5	0.3	0.029	14.2	0.3	1.2	1	0	0	1	1	1	0	LemA	family
Lebercilin	PF15619.6	gi|288560064|ref|YP_003423550.1|	-	0.053	13.2	4.4	0.056	13.1	4.4	1.0	1	0	0	1	1	1	0	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
Ion_trans_2	PF07885.16	gi|288560065|ref|YP_003423551.1|	-	3.2e-11	43.0	9.8	3.2e-11	43.0	9.8	2.4	2	1	0	2	2	2	1	Ion	channel
Ion_trans	PF00520.31	gi|288560065|ref|YP_003423551.1|	-	4.6e-11	42.4	23.3	7.2e-11	41.8	23.3	1.3	1	0	0	1	1	1	1	Ion	transport	protein
UPF0242	PF06785.11	gi|288560065|ref|YP_003423551.1|	-	0.00013	22.1	0.3	0.00027	21.1	0.3	1.5	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0242)	N-terminus
Lig_chan	PF00060.26	gi|288560065|ref|YP_003423551.1|	-	0.00086	19.2	1.8	0.0011	18.8	0.6	1.8	2	1	0	2	2	1	1	Ligand-gated	ion	channel
COG2	PF06148.11	gi|288560065|ref|YP_003423551.1|	-	0.0055	16.8	1.7	0.0099	16.0	1.7	1.4	1	0	0	1	1	1	1	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
Spc7	PF08317.11	gi|288560065|ref|YP_003423551.1|	-	0.0056	15.6	9.2	0.0079	15.1	9.2	1.2	1	0	0	1	1	1	1	Spc7	kinetochore	protein
DUF1664	PF07889.12	gi|288560065|ref|YP_003423551.1|	-	0.0057	16.7	3.9	0.0092	16.0	3.9	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1664)
Phage_HK97_TLTM	PF06120.11	gi|288560065|ref|YP_003423551.1|	-	0.0066	15.7	0.2	0.0091	15.2	0.2	1.1	1	0	0	1	1	1	1	Tail	length	tape	measure	protein
HOOK	PF05622.12	gi|288560065|ref|YP_003423551.1|	-	0.0077	14.4	7.4	0.0094	14.2	7.4	1.0	1	0	0	1	1	1	1	HOOK	protein
FapA	PF03961.13	gi|288560065|ref|YP_003423551.1|	-	0.013	14.2	4.2	0.015	13.9	4.2	1.1	1	0	0	1	1	1	0	Flagellar	Assembly	Protein	A
Laminin_II	PF06009.12	gi|288560065|ref|YP_003423551.1|	-	0.016	15.2	4.7	0.022	14.8	4.7	1.1	1	0	0	1	1	1	0	Laminin	Domain	II
ATG16	PF08614.11	gi|288560065|ref|YP_003423551.1|	-	0.017	15.3	3.7	0.022	15.0	3.7	1.1	1	0	0	1	1	1	0	Autophagy	protein	16	(ATG16)
DUF948	PF06103.11	gi|288560065|ref|YP_003423551.1|	-	0.029	14.6	0.2	0.068	13.4	0.2	1.7	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF948)
XhlA	PF10779.9	gi|288560065|ref|YP_003423551.1|	-	0.03	14.5	9.3	0.045	14.0	7.8	2.0	1	1	1	2	2	2	0	Haemolysin	XhlA
PMC2NT	PF08066.12	gi|288560065|ref|YP_003423551.1|	-	0.03	15.0	1.9	0.058	14.1	1.9	1.4	1	0	0	1	1	1	0	PMC2NT	(NUC016)	domain
HemX	PF04375.14	gi|288560065|ref|YP_003423551.1|	-	0.034	13.4	0.1	0.052	12.8	0.1	1.2	1	0	0	1	1	1	0	HemX,	putative	uroporphyrinogen-III	C-methyltransferase
DivIVA	PF05103.13	gi|288560065|ref|YP_003423551.1|	-	0.047	13.8	6.3	0.073	13.2	6.3	1.2	1	0	0	1	1	1	0	DivIVA	protein
Phage_GPO	PF05929.11	gi|288560065|ref|YP_003423551.1|	-	0.094	12.3	1.3	0.13	11.9	1.3	1.1	1	0	0	1	1	1	0	Phage	capsid	scaffolding	protein	(GPO)	serine	peptidase
Med9	PF07544.13	gi|288560065|ref|YP_003423551.1|	-	0.098	12.8	2.7	0.21	11.7	2.7	1.5	1	0	0	1	1	1	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
ADIP	PF11559.8	gi|288560065|ref|YP_003423551.1|	-	0.11	12.6	6.4	3.9	7.6	6.9	2.1	2	0	0	2	2	2	0	Afadin-	and	alpha	-actinin-Binding
DUF641	PF04859.12	gi|288560065|ref|YP_003423551.1|	-	0.14	12.5	4.6	0.26	11.6	4.6	1.4	1	0	0	1	1	1	0	Plant	protein	of	unknown	function	(DUF641)
Cauli_AT	PF03233.13	gi|288560065|ref|YP_003423551.1|	-	0.15	12.0	4.7	0.24	11.3	4.7	1.3	1	0	0	1	1	1	0	Aphid	transmission	protein
Sec34	PF04136.15	gi|288560065|ref|YP_003423551.1|	-	0.19	11.6	5.1	0.13	12.1	2.2	2.1	2	0	0	2	2	2	0	Sec34-like	family
Fib_alpha	PF08702.10	gi|288560065|ref|YP_003423551.1|	-	0.25	11.5	6.3	0.41	10.8	6.3	1.2	1	0	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
Atg14	PF10186.9	gi|288560065|ref|YP_003423551.1|	-	0.26	10.3	4.7	0.37	9.8	4.7	1.2	1	0	0	1	1	1	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
ZapB	PF06005.12	gi|288560065|ref|YP_003423551.1|	-	0.32	11.5	10.6	0.93	10.0	10.6	1.7	1	1	0	1	1	1	0	Cell	division	protein	ZapB
LUC7	PF03194.15	gi|288560065|ref|YP_003423551.1|	-	0.33	10.6	5.1	0.43	10.2	5.1	1.1	1	0	0	1	1	1	0	LUC7	N_terminus
DUF16	PF01519.16	gi|288560065|ref|YP_003423551.1|	-	0.73	10.4	6.0	1.3	9.6	6.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF16
TMF_TATA_bd	PF12325.8	gi|288560065|ref|YP_003423551.1|	-	0.85	9.9	10.8	4	7.7	2.4	2.1	1	1	1	2	2	2	0	TATA	element	modulatory	factor	1	TATA	binding
Phasin	PF05597.11	gi|288560065|ref|YP_003423551.1|	-	0.93	9.5	4.8	1.4	8.9	4.8	1.2	1	0	0	1	1	1	0	Poly(hydroxyalcanoate)	granule	associated	protein	(phasin)
FlaC_arch	PF05377.11	gi|288560065|ref|YP_003423551.1|	-	1.5	9.3	10.7	1.9	8.9	5.3	2.3	1	1	1	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
Sm_multidrug_ex	PF06695.11	gi|288560065|ref|YP_003423551.1|	-	2.5	8.7	8.4	6.8	7.4	1.0	3.2	2	1	1	3	3	3	0	Putative	small	multi-drug	export	protein
DUF4407	PF14362.6	gi|288560065|ref|YP_003423551.1|	-	2.9	7.2	4.8	1.7	7.9	0.4	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4407)
DUF2730	PF10805.8	gi|288560065|ref|YP_003423551.1|	-	3.6	7.7	9.1	0.09	12.9	0.9	2.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2730)
DUF4287	PF14117.6	gi|288560066|ref|YP_003423552.1|	-	0.043	14.0	0.0	0.64	10.2	0.0	2.4	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4287)
RTX	PF02382.15	gi|288560066|ref|YP_003423552.1|	-	0.36	10.5	1.2	0.45	10.2	1.2	1.2	1	0	0	1	1	1	0	N-terminal	domain	in	RTX	protein
Glu_synthase	PF01645.17	gi|288560067|ref|YP_003423553.1|	-	1.8e-96	323.5	0.0	2.1e-96	323.3	0.0	1.1	1	0	0	1	1	1	1	Conserved	region	in	glutamate	synthase
FMN_dh	PF01070.18	gi|288560067|ref|YP_003423553.1|	-	1.9e-07	30.5	0.8	2.3e-05	23.6	0.5	2.9	3	0	0	3	3	3	1	FMN-dependent	dehydrogenase
IMPDH	PF00478.25	gi|288560067|ref|YP_003423553.1|	-	9.9e-05	21.5	0.0	0.00021	20.4	0.0	1.5	1	0	0	1	1	1	1	IMP	dehydrogenase	/	GMP	reductase	domain
NMO	PF03060.15	gi|288560067|ref|YP_003423553.1|	-	0.0072	15.8	0.2	0.012	15.1	0.2	1.3	1	0	0	1	1	1	1	Nitronate	monooxygenase
Zn-ribbon_8	PF09723.10	gi|288560067|ref|YP_003423553.1|	-	0.022	14.9	3.1	0.05	13.7	3.1	1.6	1	0	0	1	1	1	0	Zinc	ribbon	domain
ThiG	PF05690.14	gi|288560067|ref|YP_003423553.1|	-	0.054	12.8	0.1	0.11	11.8	0.1	1.4	1	0	0	1	1	1	0	Thiazole	biosynthesis	protein	ThiG
Cys_rich_CPCC	PF14206.6	gi|288560067|ref|YP_003423553.1|	-	0.066	13.0	0.5	0.16	11.8	0.5	1.6	1	0	0	1	1	1	0	Cysteine-rich	CPCC
His_biosynth	PF00977.21	gi|288560067|ref|YP_003423553.1|	-	0.07	12.6	0.0	0.12	11.8	0.0	1.3	1	0	0	1	1	1	0	Histidine	biosynthesis	protein
Rubredoxin	PF00301.20	gi|288560067|ref|YP_003423553.1|	-	0.077	13.0	8.8	1.4	9.0	8.8	2.4	1	1	0	1	1	1	0	Rubredoxin
HypA	PF01155.19	gi|288560067|ref|YP_003423553.1|	-	0.13	12.3	0.6	0.28	11.2	0.6	1.6	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Adeno_E1B_55K	PF01696.17	gi|288560068|ref|YP_003423554.1|	-	0.0099	14.6	15.2	0.21	10.2	0.2	5.5	7	0	0	7	7	7	4	Adenovirus	EB1	55K	protein	/	large	t-antigen
Chlam_PMP	PF02415.17	gi|288560068|ref|YP_003423554.1|	-	0.072	13.6	0.1	0.072	13.6	0.1	18.3	19	1	1	20	20	20	0	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
Exonuc_VII_L	PF02601.15	gi|288560069|ref|YP_003423555.1|	-	1.3e-105	353.4	2.4	5.9e-81	272.4	0.0	2.5	1	1	1	2	2	2	2	Exonuclease	VII,	large	subunit
tRNA_anti_2	PF13742.6	gi|288560069|ref|YP_003423555.1|	-	1.2e-27	95.9	0.0	2.7e-27	94.8	0.0	1.6	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA_anti-codon	PF01336.25	gi|288560069|ref|YP_003423555.1|	-	4.5e-07	29.8	0.0	1.8e-06	27.8	0.0	2.0	2	0	0	2	2	2	1	OB-fold	nucleic	acid	binding	domain
Mis12	PF05859.12	gi|288560069|ref|YP_003423555.1|	-	0.064	13.3	0.0	0.13	12.3	0.0	1.5	1	0	0	1	1	1	0	Mis12	protein
Ribosomal_L23eN	PF03939.13	gi|288560069|ref|YP_003423555.1|	-	0.17	12.1	0.2	14	6.0	0.0	2.4	2	0	0	2	2	2	0	Ribosomal	protein	L23,	N-terminal	domain
DUF3685	PF12452.8	gi|288560069|ref|YP_003423555.1|	-	0.29	10.8	4.3	0.57	9.9	4.3	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3685)
UPF0126	PF03458.13	gi|288560069|ref|YP_003423555.1|	-	0.29	11.0	0.6	0.5	10.3	0.1	1.6	2	0	0	2	2	2	0	UPF0126	domain
Exonuc_VII_S	PF02609.16	gi|288560070|ref|YP_003423556.1|	-	2.5e-20	72.3	1.7	3.8e-20	71.7	1.7	1.3	1	0	0	1	1	1	1	Exonuclease	VII	small	subunit
DUF601	PF04642.12	gi|288560070|ref|YP_003423556.1|	-	0.0038	16.8	0.7	0.004	16.7	0.7	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF601
Csm1_N	PF18504.1	gi|288560070|ref|YP_003423556.1|	-	0.018	15.3	3.2	0.027	14.8	0.9	2.1	1	1	1	2	2	2	0	Csm1	N-terminal	domain
DUF1184	PF06683.11	gi|288560070|ref|YP_003423556.1|	-	0.041	13.4	0.6	0.048	13.2	0.6	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1184)
Vps53_N	PF04100.12	gi|288560070|ref|YP_003423556.1|	-	0.047	12.7	2.6	0.05	12.6	2.6	1.0	1	0	0	1	1	1	0	Vps53-like,	N-terminal
DASH_Dam1	PF08653.10	gi|288560070|ref|YP_003423556.1|	-	0.35	10.7	1.9	3	7.7	0.2	2.4	2	2	0	2	2	2	0	DASH	complex	subunit	Dam1
TGT	PF01702.18	gi|288560071|ref|YP_003423557.1|	-	2.8e-09	36.6	0.1	1.3e-07	31.1	0.0	2.0	1	1	1	2	2	2	2	Queuine	tRNA-ribosyltransferase
MarR	PF01047.22	gi|288560072|ref|YP_003423558.1|	-	2.7e-10	40.0	0.0	4.4e-10	39.3	0.0	1.3	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.7	gi|288560072|ref|YP_003423558.1|	-	3.6e-06	26.8	0.0	5.6e-06	26.1	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.6	gi|288560072|ref|YP_003423558.1|	-	0.0013	18.3	0.0	0.0027	17.2	0.0	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_45	PF14947.6	gi|288560072|ref|YP_003423558.1|	-	0.0024	17.8	2.3	0.0045	17.0	0.2	2.3	3	0	0	3	3	3	1	Winged	helix-turn-helix
HTH_34	PF13601.6	gi|288560072|ref|YP_003423558.1|	-	0.003	17.7	0.1	0.0047	17.1	0.1	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
R-HINP1I	PF11463.8	gi|288560072|ref|YP_003423558.1|	-	0.0059	16.1	0.9	0.0068	15.9	0.9	1.2	1	0	0	1	1	1	1	R.HinP1I	restriction	endonuclease
B-block_TFIIIC	PF04182.12	gi|288560072|ref|YP_003423558.1|	-	0.0087	16.2	0.2	0.016	15.4	0.2	1.4	1	0	0	1	1	1	1	B-block	binding	subunit	of	TFIIIC
TrmB	PF01978.19	gi|288560072|ref|YP_003423558.1|	-	0.015	15.2	0.0	0.025	14.4	0.0	1.4	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_27	PF13463.6	gi|288560072|ref|YP_003423558.1|	-	0.022	15.2	0.0	0.033	14.7	0.0	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
Fer4_8	PF13183.6	gi|288560073|ref|YP_003423559.1|	-	9.6e-09	35.6	9.1	4.8e-08	33.3	9.1	2.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|288560073|ref|YP_003423559.1|	-	2.6e-06	27.9	9.0	2.6e-06	27.9	9.0	1.9	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|288560073|ref|YP_003423559.1|	-	6.6e-06	26.1	9.3	6.6e-06	26.1	9.3	2.1	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|288560073|ref|YP_003423559.1|	-	8.5e-06	25.8	10.3	8.5e-06	25.8	10.3	1.9	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|288560073|ref|YP_003423559.1|	-	1.9e-05	25.1	10.4	7e-05	23.3	10.4	2.0	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_20	PF14691.6	gi|288560073|ref|YP_003423559.1|	-	0.014	15.1	5.5	0.42	10.4	1.0	2.7	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4	PF00037.27	gi|288560073|ref|YP_003423559.1|	-	3.1	7.8	14.6	2.6	8.0	2.6	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|288560073|ref|YP_003423559.1|	-	6	7.2	17.0	2.3	8.5	2.4	2.9	3	0	0	3	3	3	0	4Fe-4S	binding	domain
CCG	PF02754.16	gi|288560074|ref|YP_003423560.1|	-	3.7e-41	139.2	1.1	2.2e-19	69.4	0.1	2.2	2	0	0	2	2	2	2	Cysteine-rich	domain
Peptidase_C1_2	PF03051.15	gi|288560074|ref|YP_003423560.1|	-	0.17	10.7	0.0	0.23	10.2	0.0	1.1	1	0	0	1	1	1	0	Peptidase	C1-like	family
Gp_dh_C	PF02800.20	gi|288560074|ref|YP_003423560.1|	-	0.18	11.4	0.0	0.36	10.4	0.0	1.4	1	0	0	1	1	1	0	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
DUF749	PF05370.11	gi|288560075|ref|YP_003423561.1|	-	3.3e-38	129.7	0.2	3.6e-38	129.5	0.2	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF749)
Glyoxalase_5	PF14696.6	gi|288560075|ref|YP_003423561.1|	-	0.043	14.0	0.0	0.051	13.8	0.0	1.1	1	0	0	1	1	1	0	Hydroxyphenylpyruvate	dioxygenase,	HPPD,	N-terminal
DUF2096	PF09869.9	gi|288560076|ref|YP_003423562.1|	-	2.1e-69	232.9	0.0	2.4e-69	232.8	0.0	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2096)
Metallophos_2	PF12850.7	gi|288560077|ref|YP_003423563.1|	-	2.8e-15	56.9	2.4	1.6e-14	54.4	2.4	1.9	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.28	gi|288560077|ref|YP_003423563.1|	-	5.6e-15	56.4	0.4	8e-15	55.9	0.4	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_3	PF14582.6	gi|288560077|ref|YP_003423563.1|	-	9.3e-12	44.8	1.7	1e-09	38.1	1.7	2.6	1	1	0	1	1	1	1	Metallophosphoesterase,	calcineurin	superfamily
Cation_efflux	PF01545.21	gi|288560078|ref|YP_003423564.1|	-	2.8e-38	131.7	20.1	3.5e-38	131.3	20.1	1.1	1	0	0	1	1	1	1	Cation	efflux	family
ZT_dimer	PF16916.5	gi|288560078|ref|YP_003423564.1|	-	6.4e-08	32.6	0.2	6.7e-06	26.1	0.0	2.6	2	1	0	2	2	2	1	Dimerisation	domain	of	Zinc	Transporter
Fuseless	PF15993.5	gi|288560078|ref|YP_003423564.1|	-	0.053	12.7	3.5	0.29	10.3	3.9	2.0	1	1	0	1	1	1	0	Fuseless
DUF1129	PF06570.11	gi|288560078|ref|YP_003423564.1|	-	8.3	5.8	15.8	1.1	8.7	3.2	2.7	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1129)
ATP-cone	PF03477.16	gi|288560079|ref|YP_003423565.1|	-	3.9e-09	37.0	0.6	3.9e-09	37.0	0.6	2.2	3	0	0	3	3	3	1	ATP	cone	domain
AAA_18	PF13238.6	gi|288560079|ref|YP_003423565.1|	-	1.9e-05	25.2	0.0	4.6e-05	24.0	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
Zeta_toxin	PF06414.12	gi|288560079|ref|YP_003423565.1|	-	0.0013	18.1	0.0	0.36	10.1	0.0	2.4	2	0	0	2	2	2	2	Zeta	toxin
Sun2_CC2	PF18580.1	gi|288560079|ref|YP_003423565.1|	-	0.051	13.8	0.1	0.32	11.3	0.0	2.3	2	0	0	2	2	2	0	SUN2	coiled	coil	domain	2
CBS	PF00571.28	gi|288560080|ref|YP_003423566.1|	-	1.1e-25	89.9	3.9	1.8e-13	50.7	0.4	2.1	2	0	0	2	2	2	2	CBS	domain
sCache_3_2	PF17203.4	gi|288560080|ref|YP_003423566.1|	-	0.0015	18.7	0.1	2.3	8.4	0.0	2.2	2	0	0	2	2	2	2	Single	cache	domain	3
DUF3659	PF12396.8	gi|288560080|ref|YP_003423566.1|	-	0.044	13.7	1.2	5.2	7.1	0.1	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3659)
MreC	PF04085.14	gi|288560080|ref|YP_003423566.1|	-	0.083	12.8	2.0	4.2	7.3	0.2	2.3	1	1	0	2	2	2	0	rod	shape-determining	protein	MreC
GCV_T_C	PF08669.11	gi|288560080|ref|YP_003423566.1|	-	0.094	12.6	0.0	1.3	9.0	0.0	2.2	2	0	0	2	2	2	0	Glycine	cleavage	T-protein	C-terminal	barrel	domain
PRC	PF05239.16	gi|288560080|ref|YP_003423566.1|	-	0.22	11.6	3.0	0.7	10.0	0.0	2.8	3	0	0	3	3	3	0	PRC-barrel	domain
Transglut_core	PF01841.19	gi|288560081|ref|YP_003423567.1|	-	1.3e-24	86.8	0.2	7.4e-24	84.4	0.2	2.4	1	0	0	1	1	1	1	Transglutaminase-like	superfamily
PMBR	PF09373.10	gi|288560081|ref|YP_003423567.1|	-	1.8e-12	46.8	4.5	1.9e-07	30.9	0.0	5.2	5	0	0	5	5	5	3	Pseudomurein-binding	repeat
Radical_SAM	PF04055.21	gi|288560082|ref|YP_003423568.1|	-	1.4e-15	58.1	0.0	4.3e-15	56.5	0.0	1.8	2	0	0	2	2	2	1	Radical	SAM	superfamily
B12-binding	PF02310.19	gi|288560082|ref|YP_003423568.1|	-	0.0078	16.3	0.0	0.015	15.4	0.0	1.4	1	0	0	1	1	1	1	B12	binding	domain
APG17	PF04108.12	gi|288560082|ref|YP_003423568.1|	-	0.068	12.3	0.0	0.14	11.3	0.0	1.4	1	0	0	1	1	1	0	Autophagy	protein	Apg17
DUF4368	PF14287.6	gi|288560082|ref|YP_003423568.1|	-	0.12	12.7	0.3	1.2	9.5	0.5	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4368)
Aminotran_1_2	PF00155.21	gi|288560083|ref|YP_003423569.1|	-	1.4e-68	231.8	0.0	1.6e-68	231.6	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.19	gi|288560083|ref|YP_003423569.1|	-	1.8e-10	40.3	0.1	3.4e-10	39.4	0.1	1.3	1	0	0	1	1	1	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.20	gi|288560083|ref|YP_003423569.1|	-	5.3e-07	28.5	0.2	8.1e-07	27.9	0.2	1.2	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
DegT_DnrJ_EryC1	PF01041.17	gi|288560083|ref|YP_003423569.1|	-	7.3e-06	25.5	0.1	1.1e-05	24.9	0.1	1.2	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_3	PF00202.21	gi|288560083|ref|YP_003423569.1|	-	0.0013	17.5	0.0	0.0022	16.7	0.0	1.4	1	1	0	1	1	1	1	Aminotransferase	class-III
Aminotran_MocR	PF12897.7	gi|288560083|ref|YP_003423569.1|	-	0.0028	16.5	0.1	0.0087	14.9	0.1	1.7	1	1	0	1	1	1	1	Alanine-glyoxylate	amino-transferase
UBA	PF00627.31	gi|288560083|ref|YP_003423569.1|	-	0.0071	16.2	0.0	0.5	10.3	0.0	2.6	2	0	0	2	2	2	1	UBA/TS-N	domain
Cation_efflux	PF01545.21	gi|288560084|ref|YP_003423570.1|	-	8.7e-41	139.8	14.4	1.1e-40	139.6	14.4	1.1	1	0	0	1	1	1	1	Cation	efflux	family
ZT_dimer	PF16916.5	gi|288560084|ref|YP_003423570.1|	-	2e-21	75.9	1.1	3.4e-21	75.2	1.1	1.4	1	0	0	1	1	1	1	Dimerisation	domain	of	Zinc	Transporter
MerC	PF03203.14	gi|288560084|ref|YP_003423570.1|	-	0.18	12.3	5.7	0.088	13.3	1.9	2.2	2	1	0	2	2	2	0	MerC	mercury	resistance	protein
Transglut_core	PF01841.19	gi|288560085|ref|YP_003423571.1|	-	1.2e-17	64.4	1.9	1.2e-17	64.4	1.9	2.4	2	0	0	2	2	2	1	Transglutaminase-like	superfamily
CarboxypepD_reg	PF13620.6	gi|288560085|ref|YP_003423571.1|	-	1.2e-11	44.7	18.1	0.00013	22.2	0.5	5.1	3	1	1	4	4	4	4	Carboxypeptidase	regulatory-like	domain
Big_3_5	PF16640.5	gi|288560085|ref|YP_003423571.1|	-	3.1e-11	43.3	53.3	1.7e-05	24.9	7.0	5.6	6	0	0	6	6	6	4	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|288560085|ref|YP_003423571.1|	-	1.9e-08	34.2	2.8	6.9e-06	26.0	0.6	6.7	6	2	1	7	7	7	3	Bacterial	Ig-like	domain	(group	1)
Invasin_D3	PF09134.10	gi|288560085|ref|YP_003423571.1|	-	7.5e-08	32.6	44.5	0.0019	18.5	3.3	5.9	3	1	2	5	5	5	4	Invasin,	domain	3
MG4	PF17789.1	gi|288560085|ref|YP_003423571.1|	-	0.0042	17.2	20.1	2	8.6	0.7	5.2	4	1	0	5	5	5	3	Macroglobulin	domain	MG4
CTP_transf_like	PF01467.26	gi|288560086|ref|YP_003423572.1|	-	2.4e-16	60.2	0.0	2.7e-16	60.0	0.0	1.0	1	0	0	1	1	1	1	Cytidylyltransferase-like
FAD_syn	PF06574.12	gi|288560086|ref|YP_003423572.1|	-	0.00093	19.1	0.1	0.0014	18.6	0.1	1.4	1	0	0	1	1	1	1	FAD	synthetase
Fer4	PF00037.27	gi|288560087|ref|YP_003423573.1|	-	4.6e-50	165.5	80.0	4.4e-08	32.6	5.1	8.4	8	0	0	8	8	8	8	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|288560087|ref|YP_003423573.1|	-	2.1e-34	117.9	114.1	3.9e-09	36.9	4.3	5.6	2	2	5	7	7	7	7	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|288560087|ref|YP_003423573.1|	-	2.6e-29	101.1	61.9	2.5e-07	30.7	8.4	7.1	4	1	3	7	7	7	7	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|288560087|ref|YP_003423573.1|	-	1.4e-24	86.0	73.0	4.4e-08	33.1	8.0	5.2	3	2	1	5	5	5	5	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|288560087|ref|YP_003423573.1|	-	4.5e-24	83.5	79.5	2.5e-05	24.2	0.7	8.4	8	0	0	8	8	8	8	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|288560087|ref|YP_003423573.1|	-	4.8e-24	84.3	68.8	1.5e-07	31.5	9.8	6.0	3	2	4	7	7	7	7	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|288560087|ref|YP_003423573.1|	-	4.8e-24	85.1	57.5	0.0014	19.6	0.8	8.0	7	1	1	8	8	8	8	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.7	gi|288560087|ref|YP_003423573.1|	-	1.7e-19	68.6	79.3	0.00029	20.7	1.5	8.7	9	0	0	9	9	9	8	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|288560087|ref|YP_003423573.1|	-	9.6e-11	42.0	70.9	0.0002	21.7	6.2	7.1	1	1	6	7	7	7	6	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|288560087|ref|YP_003423573.1|	-	2.8e-09	36.7	87.1	0.1	13.2	3.1	8.6	9	0	0	9	9	8	8	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|288560087|ref|YP_003423573.1|	-	2.8e-08	34.2	74.5	0.14	12.7	9.8	8.0	4	3	5	9	9	9	7	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|288560087|ref|YP_003423573.1|	-	0.00011	22.6	80.4	0.24	12.0	3.4	8.3	8	0	0	8	8	8	6	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_15	PF13459.6	gi|288560087|ref|YP_003423573.1|	-	0.00024	21.8	63.6	0.17	12.7	0.8	8.5	7	1	1	8	8	8	5	4Fe-4S	single	cluster	domain
Fer4_22	PF17179.4	gi|288560087|ref|YP_003423573.1|	-	0.069	14.0	76.8	0.75	10.7	0.4	8.8	4	3	7	11	11	11	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|288560087|ref|YP_003423573.1|	-	0.16	13.0	99.8	0.17	12.9	2.9	8.9	9	0	0	9	9	9	0	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|288560087|ref|YP_003423573.1|	-	0.28	11.4	69.6	1.7	8.9	14.1	7.6	1	1	5	8	8	8	0	4Fe-4S	dicluster	domain
Class_IIIsignal	PF04021.12	gi|288560088|ref|YP_003423574.1|	-	9e-06	25.5	4.9	1.3e-05	25.0	4.9	1.2	1	0	0	1	1	1	1	Class	III	signal	peptide
Flp_Fap	PF04964.14	gi|288560088|ref|YP_003423574.1|	-	0.017	14.9	0.4	0.023	14.5	0.4	1.1	1	0	0	1	1	1	0	Flp/Fap	pilin	component
Flp1_like	PF16982.5	gi|288560088|ref|YP_003423574.1|	-	0.054	12.9	2.8	0.085	12.3	2.8	1.5	1	1	0	1	1	1	0	Putative	Flagellin,	Flp1-like,	domain
Class_IIIsignal	PF04021.12	gi|288560089|ref|YP_003423575.1|	-	5.3e-06	26.2	4.8	7.8e-06	25.7	4.8	1.2	1	0	0	1	1	1	1	Class	III	signal	peptide
Gram_pos_anchor	PF00746.21	gi|288560089|ref|YP_003423575.1|	-	0.075	13.0	0.7	0.12	12.4	0.7	1.3	1	0	0	1	1	1	0	LPXTG	cell	wall	anchor	motif
Ni_hydr_CYTB	PF01292.20	gi|288560089|ref|YP_003423575.1|	-	0.12	12.0	0.0	0.12	11.9	0.0	1.1	1	0	0	1	1	1	0	Prokaryotic	cytochrome	b561
Lactamase_B_3	PF13483.6	gi|288560091|ref|YP_003423577.1|	-	2.8e-24	85.8	0.0	6.8e-24	84.6	0.0	1.6	2	0	0	2	2	2	1	Beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.7	gi|288560091|ref|YP_003423577.1|	-	6.7e-17	61.7	0.0	9.7e-17	61.1	0.0	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|288560091|ref|YP_003423577.1|	-	1.5e-13	51.2	0.2	1.8e-13	51.0	0.2	1.1	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
VWA	PF00092.28	gi|288560092|ref|YP_003423578.1|	-	3.9e-07	30.5	0.0	5.7e-07	29.9	0.0	1.2	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA_CoxE	PF05762.14	gi|288560092|ref|YP_003423578.1|	-	9.2e-06	25.2	0.0	1.5e-05	24.5	0.0	1.2	1	0	0	1	1	1	1	VWA	domain	containing	CoxE-like	protein
VWA_2	PF13519.6	gi|288560092|ref|YP_003423578.1|	-	0.00038	21.1	0.0	0.0007	20.2	0.0	1.4	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
UPF0547	PF10571.9	gi|288560093|ref|YP_003423579.1|	-	0.0054	16.8	2.9	0.66	10.1	0.2	2.4	2	0	0	2	2	2	2	Uncharacterised	protein	family	UPF0547
zf-tcix	PF14952.6	gi|288560093|ref|YP_003423579.1|	-	0.031	13.9	0.9	2	8.1	0.0	2.3	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
zf-H2C2_2	PF13465.6	gi|288560093|ref|YP_003423579.1|	-	0.051	14.0	2.4	2	9.0	0.1	2.9	2	0	0	2	2	2	0	Zinc-finger	double	domain
zf-Mss51	PF13824.6	gi|288560093|ref|YP_003423579.1|	-	0.07	13.2	2.0	6.5	6.9	0.1	2.7	2	0	0	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
OrfB_Zn_ribbon	PF07282.11	gi|288560093|ref|YP_003423579.1|	-	0.2	11.6	1.3	22	5.1	0.1	2.6	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
Lar_restr_allev	PF14354.6	gi|288560093|ref|YP_003423579.1|	-	1.5	9.2	3.9	5.1	7.5	3.9	2.1	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
DUF2752	PF10825.8	gi|288560093|ref|YP_003423579.1|	-	2.7	8.1	5.6	16	5.6	0.1	2.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2752)
A2L_zn_ribbon	PF08792.10	gi|288560093|ref|YP_003423579.1|	-	9.3	6.1	7.6	57	3.6	0.1	3.5	3	0	0	3	3	3	0	A2L	zinc	ribbon	domain
FbpA	PF05833.11	gi|288560094|ref|YP_003423580.1|	-	1.5e-101	340.5	18.8	2.1e-101	340.0	18.8	1.2	1	0	0	1	1	1	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
NFACT-R_1	PF05670.13	gi|288560094|ref|YP_003423580.1|	-	6.5e-25	87.9	0.4	1.7e-24	86.5	0.0	2.0	2	0	0	2	2	2	1	NFACT	protein	RNA	binding	domain
H2TH	PF06831.14	gi|288560094|ref|YP_003423580.1|	-	0.00034	20.5	0.6	0.0017	18.3	0.0	2.5	2	0	0	2	2	2	1	Formamidopyrimidine-DNA	glycosylase	H2TH	domain
NFACT-R_2	PF18297.1	gi|288560094|ref|YP_003423580.1|	-	0.027	14.7	0.0	0.19	11.9	0.0	2.5	2	0	0	2	2	2	0	NFACT	protein	RNA	binding	domain
SfsA_N	PF17746.1	gi|288560094|ref|YP_003423580.1|	-	0.068	13.3	0.2	23	5.2	0.1	2.7	2	0	0	2	2	2	0	SfsA	N-terminal	OB	domain
NFACT-C	PF11923.8	gi|288560094|ref|YP_003423580.1|	-	0.088	12.7	0.0	0.088	12.7	0.0	2.5	2	0	0	2	2	2	0	NFACT	protein	C-terminal	domain
DUF3656	PF12392.8	gi|288560094|ref|YP_003423580.1|	-	0.95	10.1	3.7	0.66	10.7	0.7	2.4	1	1	1	2	2	2	0	Collagenase
T3SSipB	PF16535.5	gi|288560094|ref|YP_003423580.1|	-	1.2	9.6	5.8	0.4	11.2	2.3	1.9	2	0	0	2	2	2	0	Type	III	cell	invasion	protein	SipB
BORCS8	PF10167.9	gi|288560094|ref|YP_003423580.1|	-	2.3	8.2	6.3	2.1	8.3	0.2	2.9	3	0	0	3	3	3	0	BLOC-1-related	complex	sub-unit	8
Ribosomal_S13	PF00416.22	gi|288560094|ref|YP_003423580.1|	-	5.1	7.5	8.9	0.11	12.9	0.4	2.6	3	1	0	3	3	3	0	Ribosomal	protein	S13/S18
DUF5379	PF17350.2	gi|288560095|ref|YP_003423581.1|	-	0.0075	16.5	10.1	0.0084	16.4	10.1	1.1	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5379)
UcrQ	PF02939.16	gi|288560095|ref|YP_003423581.1|	-	0.048	13.6	0.2	0.048	13.6	0.2	1.5	2	0	0	2	2	2	0	UcrQ	family
FtsX	PF02687.21	gi|288560095|ref|YP_003423581.1|	-	4.4	7.8	10.1	0.44	11.0	2.5	2.0	1	1	1	2	2	2	0	FtsX-like	permease	family
2TM	PF13239.6	gi|288560095|ref|YP_003423581.1|	-	6.8	7.1	10.5	4.2	7.7	8.6	1.6	1	1	1	2	2	2	0	2TM	domain
Big_3_5	PF16640.5	gi|288560096|ref|YP_003423582.1|	-	4.6e-34	116.5	50.7	0.00021	21.4	4.3	18.1	19	0	0	19	19	19	12	Bacterial	Ig-like	domain	(group	3)
Peptidase_C1	PF00112.23	gi|288560096|ref|YP_003423582.1|	-	1.7e-25	90.4	3.1	5.4e-25	88.8	3.1	1.8	1	0	0	1	1	1	1	Papain	family	cysteine	protease
Big_1	PF02369.16	gi|288560096|ref|YP_003423582.1|	-	3.5e-20	71.8	74.6	4.1e-05	23.5	2.3	16.1	17	1	0	17	17	17	9	Bacterial	Ig-like	domain	(group	1)
Lectin_like	PF18560.1	gi|288560096|ref|YP_003423582.1|	-	3.4e-10	40.3	8.6	3.4e-10	40.3	8.6	6.8	6	1	0	6	6	6	2	Lectin	like	domain
DUF4399	PF14347.6	gi|288560096|ref|YP_003423582.1|	-	1.4e-06	28.6	0.0	13	6.3	0.0	7.9	10	0	0	10	10	10	1	Domain	of	unknown	function	(DUF4399)
UL141	PF16758.5	gi|288560096|ref|YP_003423582.1|	-	0.00039	20.2	1.0	0.89	9.3	0.0	3.4	3	0	0	3	3	3	1	Herpes-like	virus	membrane	glycoprotein	UL141
MG4	PF17789.1	gi|288560096|ref|YP_003423582.1|	-	0.0013	18.9	42.7	2.6	8.2	0.0	12.2	12	1	1	13	13	13	4	Macroglobulin	domain	MG4
NUC153	PF08159.12	gi|288560096|ref|YP_003423582.1|	-	0.0024	17.7	2.9	4.9	7.1	0.1	3.7	3	0	0	3	3	3	1	NUC153	domain
Y_Y_Y	PF07495.13	gi|288560096|ref|YP_003423582.1|	-	0.018	15.0	36.2	0.41	10.6	0.4	9.4	9	0	0	9	9	9	0	Y_Y_Y	domain
HTH_34	PF13601.6	gi|288560096|ref|YP_003423582.1|	-	0.12	12.6	0.3	37	4.6	0.0	3.4	3	0	0	3	3	3	0	Winged	helix	DNA-binding	domain
DUF2070	PF09843.9	gi|288560097|ref|YP_003423583.1|	-	3.5e-189	629.7	17.2	4e-189	629.6	17.2	1.0	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2070)
DUF2615	PF11027.8	gi|288560097|ref|YP_003423583.1|	-	1.5	9.0	3.2	1.6	8.9	0.0	2.6	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2615)
Stevor	PF17410.2	gi|288560097|ref|YP_003423583.1|	-	7.5	6.0	7.7	3.7	7.0	0.3	2.4	2	0	0	2	2	2	0	Subtelomeric	Variable	Open	Reading	frame
Fumerase_C	PF05683.12	gi|288560098|ref|YP_003423584.1|	-	6.4e-46	156.3	0.1	7.1e-46	156.1	0.1	1.0	1	0	0	1	1	1	1	Fumarase	C-terminus
Oxidored_q6	PF01058.22	gi|288560098|ref|YP_003423584.1|	-	0.13	12.1	0.3	0.76	9.6	0.1	2.0	1	1	0	2	2	2	0	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
Lectin_like	PF18560.1	gi|288560099|ref|YP_003423585.1|	-	4.4e-29	101.7	5.2	4.4e-29	101.7	5.2	3.6	3	1	0	3	3	3	1	Lectin	like	domain
Peptidase_C1	PF00112.23	gi|288560099|ref|YP_003423585.1|	-	2.1e-27	96.6	0.2	4.9e-27	95.5	0.2	1.7	1	0	0	1	1	1	1	Papain	family	cysteine	protease
Big_3_5	PF16640.5	gi|288560099|ref|YP_003423585.1|	-	1.2e-05	25.4	2.5	1.2e-05	25.4	2.5	5.9	7	1	0	7	7	7	3	Bacterial	Ig-like	domain	(group	3)
Peptidase_C1_2	PF03051.15	gi|288560099|ref|YP_003423585.1|	-	0.0017	17.2	0.1	1.4	7.6	0.0	2.6	2	0	0	2	2	2	2	Peptidase	C1-like	family
Big_1	PF02369.16	gi|288560099|ref|YP_003423585.1|	-	0.0022	17.9	22.2	0.0061	16.5	1.4	6.3	7	0	0	7	7	7	2	Bacterial	Ig-like	domain	(group	1)
Invasin_D3	PF09134.10	gi|288560099|ref|YP_003423585.1|	-	0.0024	18.2	12.2	0.054	13.8	2.3	5.0	4	1	0	4	4	4	2	Invasin,	domain	3
DUF11	PF01345.18	gi|288560099|ref|YP_003423585.1|	-	0.39	11.0	0.0	0.39	11.0	0.0	3.6	3	0	0	3	3	3	0	Domain	of	unknown	function	DUF11
Lectin_like	PF18560.1	gi|288560100|ref|YP_003423586.1|	-	4.9e-35	121.0	1.6	4.9e-35	121.0	1.6	2.7	2	0	0	2	2	2	1	Lectin	like	domain
Big_1	PF02369.16	gi|288560100|ref|YP_003423586.1|	-	1.6e-27	95.3	31.3	1.7e-07	31.1	7.6	10.9	11	0	0	11	11	11	6	Bacterial	Ig-like	domain	(group	1)
Big_3_5	PF16640.5	gi|288560100|ref|YP_003423586.1|	-	2.3e-25	88.6	30.3	1.8e-07	31.3	9.8	10.4	11	0	0	11	11	10	7	Bacterial	Ig-like	domain	(group	3)
Peptidase_C1	PF00112.23	gi|288560100|ref|YP_003423586.1|	-	1.3e-23	84.2	0.1	4.3e-23	82.5	0.1	1.9	1	0	0	1	1	1	1	Papain	family	cysteine	protease
MG4	PF17789.1	gi|288560100|ref|YP_003423586.1|	-	5.2e-13	49.0	0.7	0.26	11.4	0.0	7.7	8	0	0	8	8	8	3	Macroglobulin	domain	MG4
Invasin_D3	PF09134.10	gi|288560100|ref|YP_003423586.1|	-	1e-11	45.0	20.6	1.8e-05	25.0	7.6	7.6	8	0	0	8	8	7	2	Invasin,	domain	3
CarboxypepD_reg	PF13620.6	gi|288560100|ref|YP_003423586.1|	-	2.7e-10	40.4	4.0	0.36	11.1	1.1	8.4	10	0	0	10	10	10	3	Carboxypeptidase	regulatory-like	domain
Peptidase_C1_2	PF03051.15	gi|288560100|ref|YP_003423586.1|	-	4.9e-06	25.6	0.6	0.011	14.5	0.0	2.4	2	0	0	2	2	2	2	Peptidase	C1-like	family
MG2	PF01835.19	gi|288560100|ref|YP_003423586.1|	-	0.0019	18.6	0.0	1.5e+02	2.9	0.0	6.2	7	0	0	7	7	7	0	MG2	domain
Chlam_PMP	PF02415.17	gi|288560100|ref|YP_003423586.1|	-	0.0029	18.0	0.7	0.0029	18.0	0.7	8.7	7	0	0	7	7	6	2	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
DUF3244	PF11589.8	gi|288560100|ref|YP_003423586.1|	-	0.42	10.7	5.3	12	6.0	0.0	4.3	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF3244)
SelA	PF03841.13	gi|288560102|ref|YP_003423588.1|	-	3.5e-08	32.8	0.4	5.6e-08	32.2	0.1	1.5	2	0	0	2	2	2	1	L-seryl-tRNA	selenium	transferase
Cys_Met_Meta_PP	PF01053.20	gi|288560102|ref|YP_003423588.1|	-	1e-06	27.5	0.0	1.8e-06	26.8	0.0	1.3	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Aminotran_5	PF00266.19	gi|288560102|ref|YP_003423588.1|	-	0.00013	21.0	0.1	0.00019	20.5	0.1	1.2	1	0	0	1	1	1	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.21	gi|288560102|ref|YP_003423588.1|	-	0.00015	21.2	0.0	0.00021	20.7	0.0	1.3	1	0	0	1	1	1	1	Beta-eliminating	lyase
SepSecS	PF05889.13	gi|288560102|ref|YP_003423588.1|	-	0.0025	16.6	0.0	0.0031	16.3	0.0	1.2	1	0	0	1	1	1	1	O-phosphoseryl-tRNA(Sec)	selenium	transferase,	SepSecS
SHMT	PF00464.19	gi|288560102|ref|YP_003423588.1|	-	0.0047	15.6	0.0	0.0058	15.3	0.0	1.2	1	0	0	1	1	1	1	Serine	hydroxymethyltransferase
OKR_DC_1	PF01276.20	gi|288560102|ref|YP_003423588.1|	-	0.047	12.4	0.0	0.12	11.1	0.0	1.5	1	1	0	2	2	2	0	Orn/Lys/Arg	decarboxylase,	major	domain
Met_gamma_lyase	PF06838.11	gi|288560102|ref|YP_003423588.1|	-	0.065	11.7	0.0	0.1	11.1	0.0	1.2	1	0	0	1	1	1	0	Methionine	gamma-lyase
BPL_LplA_LipB	PF03099.19	gi|288560103|ref|YP_003423589.1|	-	6.3e-14	52.0	0.4	1.9e-13	50.4	0.0	1.9	2	0	0	2	2	2	1	Biotin/lipoate	A/B	protein	ligase	family
BPL_C	PF02237.17	gi|288560103|ref|YP_003423589.1|	-	3.5e-06	26.8	1.1	1.1e-05	25.2	1.1	1.9	1	0	0	1	1	1	1	Biotin	protein	ligase	C	terminal	domain
BPL_LplA_LipB_2	PF16917.5	gi|288560103|ref|YP_003423589.1|	-	4.1e-05	23.2	0.0	5.9e-05	22.7	0.0	1.2	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
DUF3887	PF13026.6	gi|288560103|ref|YP_003423589.1|	-	0.045	14.6	2.2	0.15	12.9	0.1	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3887)
CPSase_L_D2	PF02786.17	gi|288560104|ref|YP_003423590.1|	-	1.5e-78	263.1	0.4	2.2e-78	262.6	0.4	1.2	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Biotin_carb_N	PF00289.22	gi|288560104|ref|YP_003423590.1|	-	5.7e-44	149.2	0.0	1.3e-43	148.0	0.0	1.6	1	0	0	1	1	1	1	Biotin	carboxylase,	N-terminal	domain
Biotin_carb_C	PF02785.19	gi|288560104|ref|YP_003423590.1|	-	2.5e-40	136.9	0.0	5.2e-40	135.9	0.0	1.6	1	0	0	1	1	1	1	Biotin	carboxylase	C-terminal	domain
Dala_Dala_lig_C	PF07478.13	gi|288560104|ref|YP_003423590.1|	-	3.1e-13	49.8	0.1	6.7e-13	48.6	0.1	1.6	1	1	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
ATP-grasp_3	PF02655.14	gi|288560104|ref|YP_003423590.1|	-	4.4e-07	30.1	0.0	1e-06	28.9	0.0	1.7	1	0	0	1	1	1	1	ATP-grasp	domain
RimK	PF08443.11	gi|288560104|ref|YP_003423590.1|	-	1.9e-05	24.3	0.0	8.4e-05	22.2	0.0	1.9	1	1	0	1	1	1	1	RimK-like	ATP-grasp	domain
ATP-grasp	PF02222.22	gi|288560104|ref|YP_003423590.1|	-	5.6e-05	22.8	0.1	9.1e-05	22.1	0.1	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_5	PF13549.6	gi|288560104|ref|YP_003423590.1|	-	0.002	17.6	0.0	0.0047	16.4	0.0	1.5	1	0	0	1	1	1	1	ATP-grasp	domain
Oxidored_nitro	PF00148.19	gi|288560104|ref|YP_003423590.1|	-	0.007	15.1	0.1	1.8	7.2	0.0	2.2	2	0	0	2	2	2	2	Nitrogenase	component	1	type	Oxidoreductase
ATPgrasp_ST	PF14397.6	gi|288560104|ref|YP_003423590.1|	-	0.02	14.1	0.1	0.046	13.0	0.0	1.5	2	0	0	2	2	2	0	Sugar-transfer	associated	ATP-grasp
ATPgrasp_Ter	PF15632.6	gi|288560104|ref|YP_003423590.1|	-	0.023	14.4	0.0	0.045	13.5	0.0	1.4	1	0	0	1	1	1	0	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp_4	PF13535.6	gi|288560104|ref|YP_003423590.1|	-	0.079	12.6	0.0	0.33	10.5	0.0	2.1	2	0	0	2	2	2	0	ATP-grasp	domain
PrmA	PF06325.13	gi|288560106|ref|YP_003423592.1|	-	2e-07	30.7	0.4	3e-07	30.1	0.4	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_25	PF13649.6	gi|288560106|ref|YP_003423592.1|	-	3.4e-05	24.5	0.0	9.6e-05	23.0	0.0	1.8	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|288560106|ref|YP_003423592.1|	-	3.6e-05	23.6	0.1	6.1e-05	22.9	0.1	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|288560106|ref|YP_003423592.1|	-	0.00051	19.6	0.4	0.26	10.8	0.0	2.8	3	0	0	3	3	3	2	Methyltransferase	small	domain
Methyltransf_23	PF13489.6	gi|288560106|ref|YP_003423592.1|	-	0.0092	15.8	0.0	0.011	15.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|288560106|ref|YP_003423592.1|	-	0.019	15.6	0.0	0.065	13.9	0.0	1.9	2	0	0	2	2	2	0	Methyltransferase	domain
Methyltransf_9	PF08003.11	gi|288560106|ref|YP_003423592.1|	-	0.096	11.6	0.0	0.12	11.2	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1698)
Methyltransf_12	PF08242.12	gi|288560106|ref|YP_003423592.1|	-	0.12	13.1	0.1	0.26	12.1	0.1	1.8	1	1	0	1	1	1	0	Methyltransferase	domain
Methyltrn_RNA_3	PF02598.17	gi|288560107|ref|YP_003423593.1|	-	6e-56	190.0	0.0	7.4e-56	189.8	0.0	1.1	1	0	0	1	1	1	1	Putative	RNA	methyltransferase
SpoU_methylase	PF00588.19	gi|288560107|ref|YP_003423593.1|	-	0.042	14.0	0.0	6.3	7.0	0.0	2.2	2	0	0	2	2	2	0	SpoU	rRNA	Methylase	family
Ribosomal_L3	PF00297.22	gi|288560108|ref|YP_003423594.1|	-	6.2e-96	321.6	0.8	7.4e-96	321.3	0.8	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L3
Ribosomal_L4	PF00573.22	gi|288560109|ref|YP_003423595.1|	-	1e-46	159.0	0.8	1.2e-46	158.8	0.8	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L4/L1	family
DUF2149	PF09919.9	gi|288560109|ref|YP_003423595.1|	-	0.15	12.3	0.5	0.34	11.2	0.4	1.6	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2149)
Ribosomal_L23	PF00276.20	gi|288560110|ref|YP_003423596.1|	-	6.4e-16	58.5	3.6	3.6e-15	56.1	3.6	1.8	1	1	0	1	1	1	1	Ribosomal	protein	L23
Ribosomal_L2_C	PF03947.18	gi|288560111|ref|YP_003423597.1|	-	9.6e-45	151.9	0.4	2e-44	150.8	0.3	1.5	2	0	0	2	2	2	1	Ribosomal	Proteins	L2,	C-terminal	domain
Ribosomal_L2	PF00181.23	gi|288560111|ref|YP_003423597.1|	-	1.4e-22	79.4	0.0	3.6e-22	78.1	0.0	1.7	1	0	0	1	1	1	1	Ribosomal	Proteins	L2,	RNA	binding	domain
Ribosomal_S19	PF00203.21	gi|288560112|ref|YP_003423598.1|	-	5.6e-29	99.8	0.1	7.4e-29	99.5	0.1	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S19
Citrate_synt	PF00285.21	gi|288560112|ref|YP_003423598.1|	-	0.068	12.2	0.0	0.085	11.9	0.0	1.1	1	0	0	1	1	1	0	Citrate	synthase,	C-terminal	domain
Ribosomal_L22	PF00237.19	gi|288560113|ref|YP_003423599.1|	-	8.8e-33	112.6	0.4	1.1e-32	112.4	0.4	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L22p/L17e
Ribosomal_S3_C	PF00189.20	gi|288560114|ref|YP_003423600.1|	-	2.6e-21	75.9	1.4	4.6e-21	75.1	0.9	1.7	2	0	0	2	2	2	1	Ribosomal	protein	S3,	C-terminal	domain
KH_2	PF07650.17	gi|288560114|ref|YP_003423600.1|	-	7.4e-17	60.9	2.9	2.5e-16	59.3	0.1	2.5	2	0	0	2	2	2	1	KH	domain
KH_1	PF00013.29	gi|288560114|ref|YP_003423600.1|	-	0.00036	20.3	0.2	0.0098	15.7	0.0	2.7	2	0	0	2	2	2	1	KH	domain
KH_4	PF13083.6	gi|288560114|ref|YP_003423600.1|	-	0.035	14.0	0.1	0.035	14.0	0.1	2.4	2	0	0	2	2	2	0	KH	domain
Syntaxin-6_N	PF09177.11	gi|288560114|ref|YP_003423600.1|	-	0.16	12.5	3.9	2.4	8.8	3.8	2.2	2	0	0	2	2	2	0	Syntaxin	6,	N-terminal
KfrA_N	PF11740.8	gi|288560114|ref|YP_003423600.1|	-	0.24	12.1	8.4	0.14	12.8	5.2	2.1	2	1	0	2	2	2	0	Plasmid	replication	region	DNA-binding	N-term
Mt_ATP-synt_D	PF05873.12	gi|288560114|ref|YP_003423600.1|	-	0.46	10.3	5.3	0.87	9.4	5.3	1.4	1	0	0	1	1	1	0	ATP	synthase	D	chain,	mitochondrial	(ATP5H)
DUF1664	PF07889.12	gi|288560114|ref|YP_003423600.1|	-	0.47	10.5	2.0	1.3	9.1	2.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
Poly_export	PF02563.16	gi|288560114|ref|YP_003423600.1|	-	0.48	10.7	2.7	5.8	7.2	0.1	3.1	2	1	1	3	3	3	0	Polysaccharide	biosynthesis/export	protein
Prefoldin_2	PF01920.20	gi|288560114|ref|YP_003423600.1|	-	0.61	10.1	11.4	1.3	9.0	11.4	1.5	1	0	0	1	1	1	0	Prefoldin	subunit
Ribosomal_L29	PF00831.23	gi|288560115|ref|YP_003423601.1|	-	6.9e-17	61.2	1.3	8.1e-17	60.9	1.3	1.1	1	0	0	1	1	1	1	Ribosomal	L29	protein
SUI1	PF01253.22	gi|288560116|ref|YP_003423602.1|	-	1.3e-19	70.5	1.3	1.9e-19	70.0	1.3	1.3	1	0	0	1	1	1	1	Translation	initiation	factor	SUI1
Img2	PF05046.14	gi|288560116|ref|YP_003423602.1|	-	0.00013	22.2	0.2	0.0002	21.6	0.2	1.3	1	1	0	1	1	1	1	Mitochondrial	large	subunit	ribosomal	protein	(Img2)
DTW	PF03942.15	gi|288560116|ref|YP_003423602.1|	-	0.054	13.2	1.2	0.082	12.6	1.2	1.3	1	0	0	1	1	1	0	DTW	domain
UPF0086	PF01868.16	gi|288560117|ref|YP_003423603.1|	-	1.1e-22	79.7	0.0	1.7e-22	79.1	0.0	1.3	1	1	0	1	1	1	1	Domain	of	unknown	function	UPF0086
Ribosomal_S17	PF00366.20	gi|288560118|ref|YP_003423604.1|	-	2.7e-24	85.0	2.2	3.5e-24	84.7	2.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S17
Ribosomal_S17_N	PF16205.5	gi|288560118|ref|YP_003423604.1|	-	0.0028	18.0	0.0	0.007	16.7	0.0	1.7	1	0	0	1	1	1	1	Ribosomal_S17	N-terminal
Ribosomal_L14	PF00238.19	gi|288560119|ref|YP_003423605.1|	-	5.2e-35	120.2	1.5	6.3e-35	119.9	1.5	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L14p/L23e
Ribosomal_L26	PF16906.5	gi|288560120|ref|YP_003423606.1|	-	1.5e-28	99.0	0.2	1.8e-28	98.8	0.2	1.1	1	0	0	1	1	1	1	Ribosomal	proteins	L26	eukaryotic,	L24P	archaeal
KOW	PF00467.29	gi|288560120|ref|YP_003423606.1|	-	1.5e-08	34.3	5.2	2.7e-08	33.5	5.2	1.4	1	0	0	1	1	1	1	KOW	motif
Methyltrans_RNA	PF04452.14	gi|288560120|ref|YP_003423606.1|	-	0.06	12.7	0.0	0.078	12.3	0.0	1.1	1	0	0	1	1	1	0	RNA	methyltransferase
Ribosomal_S4e	PF00900.20	gi|288560121|ref|YP_003423607.1|	-	4.9e-30	103.2	0.1	1.1e-29	102.2	0.1	1.6	1	0	0	1	1	1	1	Ribosomal	family	S4e
RS4NT	PF08071.12	gi|288560121|ref|YP_003423607.1|	-	5.9e-16	58.3	3.5	9.6e-16	57.6	3.5	1.3	1	0	0	1	1	1	1	RS4NT	(NUC023)	domain
S4	PF01479.25	gi|288560121|ref|YP_003423607.1|	-	1.4e-08	34.3	0.0	2.7e-08	33.4	0.0	1.5	1	0	0	1	1	1	1	S4	domain
KOW	PF00467.29	gi|288560121|ref|YP_003423607.1|	-	9.2e-05	22.3	0.9	0.00022	21.1	0.9	1.6	1	0	0	1	1	1	1	KOW	motif
DUF4920	PF16267.5	gi|288560121|ref|YP_003423607.1|	-	0.04	13.9	0.0	4.4	7.3	0.0	2.7	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4920)
Ribosomal_L5_C	PF00673.21	gi|288560122|ref|YP_003423608.1|	-	8.1e-24	83.6	0.0	1.2e-23	83.0	0.0	1.3	1	0	0	1	1	1	1	ribosomal	L5P	family	C-terminus
Ribosomal_L5	PF00281.19	gi|288560122|ref|YP_003423608.1|	-	3.3e-16	59.3	0.1	8.8e-16	58.0	0.1	1.7	1	0	0	1	1	1	1	Ribosomal	protein	L5
Ribosomal_S14	PF00253.21	gi|288560123|ref|YP_003423609.1|	-	1.8e-12	46.8	1.8	2.1e-12	46.6	1.8	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S14p/S29e
DUF2039	PF10217.9	gi|288560123|ref|YP_003423609.1|	-	0.12	12.8	3.1	0.5	10.7	0.1	1.9	1	1	1	2	2	2	0	Uncharacterized	conserved	protein	(DUF2039)
Ribosomal_S8	PF00410.19	gi|288560124|ref|YP_003423610.1|	-	1.2e-28	99.6	0.0	1.4e-28	99.4	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S8
Ribosomal_L6	PF00347.23	gi|288560125|ref|YP_003423611.1|	-	1.9e-29	102.1	8.9	1.3e-17	64.2	0.7	2.1	2	0	0	2	2	2	2	Ribosomal	protein	L6
Ribosomal_L32e	PF01655.18	gi|288560126|ref|YP_003423612.1|	-	9.3e-40	135.4	0.1	1e-39	135.3	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L32
Ribosomal_L19e	PF01280.20	gi|288560127|ref|YP_003423613.1|	-	6.1e-56	188.5	8.3	6.7e-56	188.4	8.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L19e
V_ATPase_prox	PF18274.1	gi|288560127|ref|YP_003423613.1|	-	0.046	13.7	0.2	0.11	12.5	0.0	1.7	2	0	0	2	2	2	0	Vacuolar	ATPase	Subunit	I	N-terminal	proximal	lobe
Ribosomal_L5e	PF17144.4	gi|288560128|ref|YP_003423614.1|	-	5.5e-33	114.3	2.7	1e-23	84.1	0.8	2.9	2	1	1	3	3	3	2	Ribosomal	large	subunit	proteins	60S	L5,	and	50S	L18
Ribosomal_L18_c	PF14204.6	gi|288560128|ref|YP_003423614.1|	-	5.3e-07	30.5	0.1	9e-07	29.7	0.1	1.3	1	0	0	1	1	1	1	Ribosomal	L18	C-terminal	region
Ribosomal_L18p	PF00861.22	gi|288560128|ref|YP_003423614.1|	-	0.00012	22.4	0.3	0.00019	21.8	0.3	1.4	1	0	0	1	1	1	1	Ribosomal	L18	of	archaea,	bacteria,	mitoch.	and	chloroplast
Ribosomal_S5	PF00333.20	gi|288560129|ref|YP_003423615.1|	-	4.9e-24	84.1	3.3	1.3e-23	82.7	3.3	1.8	1	0	0	1	1	1	1	Ribosomal	protein	S5,	N-terminal	domain
Ribosomal_S5_C	PF03719.15	gi|288560129|ref|YP_003423615.1|	-	2.2e-19	68.6	0.2	3.7e-19	67.9	0.2	1.3	1	0	0	1	1	1	1	Ribosomal	protein	S5,	C-terminal	domain
Ribosomal_L30	PF00327.20	gi|288560130|ref|YP_003423616.1|	-	6.8e-15	54.7	0.0	1.2e-14	53.9	0.0	1.4	1	0	0	1	1	1	1	Ribosomal	protein	L30p/L7e
UPF0220	PF05255.11	gi|288560130|ref|YP_003423616.1|	-	0.087	12.4	0.0	0.13	11.8	0.0	1.2	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0220)
DUF4368	PF14287.6	gi|288560130|ref|YP_003423616.1|	-	0.1	12.9	0.1	3.3	8.1	0.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4368)
Ribosomal_L27A	PF00828.19	gi|288560131|ref|YP_003423617.1|	-	5.2e-20	72.4	0.2	6.9e-20	72.0	0.2	1.1	1	0	0	1	1	1	1	Ribosomal	proteins	50S-L15,	50S-L18e,	60S-L27A
SecY	PF00344.20	gi|288560132|ref|YP_003423618.1|	-	2.6e-67	227.2	24.2	3.3e-67	226.9	24.2	1.1	1	0	0	1	1	1	1	SecY	translocase
Plug_translocon	PF10559.9	gi|288560132|ref|YP_003423618.1|	-	4.8e-11	42.3	1.7	1.2e-10	41.1	1.7	1.7	1	0	0	1	1	1	1	Plug	domain	of	Sec61p
Herpes_glycop	PF01528.16	gi|288560132|ref|YP_003423618.1|	-	1.1	8.0	6.9	0.073	11.9	0.3	2.1	2	0	0	2	2	2	0	Herpesvirus	glycoprotein	M
AAA_17	PF13207.6	gi|288560133|ref|YP_003423619.1|	-	1.1e-41	142.5	0.0	1.3e-41	142.2	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.6	gi|288560133|ref|YP_003423619.1|	-	2.2e-08	34.7	0.0	4e-08	33.9	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.6	gi|288560133|ref|YP_003423619.1|	-	0.00029	21.0	0.1	0.00067	19.8	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_28	PF13521.6	gi|288560133|ref|YP_003423619.1|	-	0.0043	17.3	0.5	0.059	13.6	0.1	2.0	2	0	0	2	2	2	1	AAA	domain
NTPase_1	PF03266.15	gi|288560133|ref|YP_003423619.1|	-	0.0047	16.9	0.0	0.0064	16.4	0.0	1.3	1	0	0	1	1	1	1	NTPase
KTI12	PF08433.10	gi|288560133|ref|YP_003423619.1|	-	0.024	14.1	0.1	0.039	13.4	0.1	1.4	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
cobW	PF02492.19	gi|288560133|ref|YP_003423619.1|	-	0.05	13.2	0.0	0.075	12.6	0.0	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
Viral_helicase1	PF01443.18	gi|288560133|ref|YP_003423619.1|	-	0.083	12.6	0.1	0.15	11.7	0.0	1.5	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
NB-ARC	PF00931.22	gi|288560133|ref|YP_003423619.1|	-	0.083	12.1	0.0	0.11	11.7	0.0	1.2	1	0	0	1	1	1	0	NB-ARC	domain
AAA_16	PF13191.6	gi|288560133|ref|YP_003423619.1|	-	0.14	12.5	0.1	0.28	11.6	0.1	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
EMC3_TMCO1	PF01956.16	gi|288560134|ref|YP_003423620.1|	-	2.6e-38	131.4	6.7	3.1e-38	131.2	6.7	1.1	1	0	0	1	1	1	1	Integral	membrane	protein	EMC3/TMCO1-like
DUF1090	PF06476.12	gi|288560134|ref|YP_003423620.1|	-	0.073	13.2	6.5	0.1	12.8	6.5	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1090)
DPM3	PF08285.11	gi|288560134|ref|YP_003423620.1|	-	0.31	11.3	0.0	0.31	11.3	0.0	2.2	2	1	0	2	2	2	0	Dolichol-phosphate	mannosyltransferase	subunit	3	(DPM3)
DUF2208	PF09973.9	gi|288560134|ref|YP_003423620.1|	-	0.77	9.3	5.6	1.6	8.3	5.6	1.6	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2208)
DUF5595	PF18077.1	gi|288560134|ref|YP_003423620.1|	-	0.79	9.8	2.6	0.49	10.5	0.6	1.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF5595)
DUF4199	PF13858.6	gi|288560134|ref|YP_003423620.1|	-	1.5	9.2	11.4	0.034	14.5	3.7	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4199)
Ribosomal_L34e	PF01199.18	gi|288560135|ref|YP_003423621.1|	-	6.5e-26	90.5	3.7	7.5e-26	90.3	3.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L34e
DZR	PF12773.7	gi|288560135|ref|YP_003423621.1|	-	0.0015	18.5	0.5	0.0022	18.0	0.5	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
TF_Zn_Ribbon	PF08271.12	gi|288560135|ref|YP_003423621.1|	-	0.027	14.0	1.1	0.87	9.2	0.1	2.2	2	0	0	2	2	2	0	TFIIB	zinc-binding
Tnp_zf-ribbon_2	PF13842.6	gi|288560135|ref|YP_003423621.1|	-	0.34	11.8	0.0	0.34	11.8	0.0	2.5	3	0	0	3	3	3	0	DDE_Tnp_1-like	zinc-ribbon
Cytidylate_kin2	PF13189.6	gi|288560136|ref|YP_003423622.1|	-	1.7e-24	86.9	3.3	1.2e-23	84.1	3.3	1.9	1	1	0	1	1	1	1	Cytidylate	kinase-like	family
AAA_18	PF13238.6	gi|288560136|ref|YP_003423622.1|	-	4.2e-15	56.5	0.1	5.2e-15	56.2	0.1	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.6	gi|288560136|ref|YP_003423622.1|	-	1.2e-11	45.1	0.3	3.6e-11	43.6	0.3	1.8	1	1	0	1	1	1	1	AAA	domain
Cytidylate_kin	PF02224.18	gi|288560136|ref|YP_003423622.1|	-	1.8e-11	44.2	5.4	4.1e-05	23.4	0.2	2.1	1	1	1	2	2	2	2	Cytidylate	kinase
ADK	PF00406.22	gi|288560136|ref|YP_003423622.1|	-	0.0013	18.8	0.3	0.0088	16.2	0.0	2.0	1	1	1	2	2	2	1	Adenylate	kinase
CoaE	PF01121.20	gi|288560136|ref|YP_003423622.1|	-	0.0025	17.5	1.4	0.024	14.3	0.2	2.1	1	1	1	2	2	2	1	Dephospho-CoA	kinase
AAA_33	PF13671.6	gi|288560136|ref|YP_003423622.1|	-	0.0064	16.7	0.1	0.12	12.5	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
PRK	PF00485.18	gi|288560136|ref|YP_003423622.1|	-	0.032	14.0	1.2	0.2	11.4	0.7	2.1	1	1	1	2	2	2	0	Phosphoribulokinase	/	Uridine	kinase	family
5_3_exonuc	PF01367.20	gi|288560136|ref|YP_003423622.1|	-	0.16	12.6	0.5	0.63	10.7	0.4	2.0	1	1	0	1	1	1	0	5'-3'	exonuclease,	C-terminal	SAM	fold
KOW	PF00467.29	gi|288560137|ref|YP_003423623.1|	-	0.0003	20.6	0.1	0.00077	19.3	0.0	1.6	1	1	1	2	2	2	1	KOW	motif
UPF0728	PF15092.6	gi|288560137|ref|YP_003423623.1|	-	0.063	13.1	0.1	0.072	12.9	0.1	1.1	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0728
Chlam_PMP	PF02415.17	gi|288560138|ref|YP_003423624.1|	-	6.5e-09	35.7	95.0	0.14	12.7	0.7	17.1	17	1	1	18	18	18	10	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
Beta_helix	PF13229.6	gi|288560138|ref|YP_003423624.1|	-	9.3e-06	25.6	138.8	0.011	15.6	27.7	6.7	2	2	5	7	7	7	6	Right	handed	beta	helix	region
ABC_tran	PF00005.27	gi|288560139|ref|YP_003423625.1|	-	9.5e-36	123.3	0.0	1.3e-35	122.9	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|288560139|ref|YP_003423625.1|	-	2.5e-14	53.8	0.4	4.4e-10	39.8	0.0	2.3	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|288560139|ref|YP_003423625.1|	-	4.3e-10	39.4	0.0	4.8e-08	32.7	0.0	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.6	gi|288560139|ref|YP_003423625.1|	-	4.5e-05	23.3	0.0	0.16	11.7	0.0	2.2	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_29	PF13555.6	gi|288560139|ref|YP_003423625.1|	-	0.0012	18.6	0.0	0.0023	17.6	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
RsgA_GTPase	PF03193.16	gi|288560139|ref|YP_003423625.1|	-	0.0084	16.0	0.1	0.019	14.8	0.0	1.6	2	0	0	2	2	2	1	RsgA	GTPase
AAA_16	PF13191.6	gi|288560139|ref|YP_003423625.1|	-	0.021	15.2	0.0	0.047	14.1	0.0	1.7	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_23	PF13476.6	gi|288560139|ref|YP_003423625.1|	-	0.038	14.5	0.2	0.098	13.1	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
AAA_13	PF13166.6	gi|288560139|ref|YP_003423625.1|	-	0.057	12.1	0.0	3.7	6.1	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
AAA_18	PF13238.6	gi|288560139|ref|YP_003423625.1|	-	0.069	13.7	0.2	17	5.9	0.1	2.9	2	2	1	3	3	3	0	AAA	domain
DLIC	PF05783.11	gi|288560139|ref|YP_003423625.1|	-	0.099	11.5	0.1	0.14	10.9	0.1	1.1	1	0	0	1	1	1	0	Dynein	light	intermediate	chain	(DLIC)
AAA_30	PF13604.6	gi|288560139|ref|YP_003423625.1|	-	0.11	12.1	0.0	0.37	10.5	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
CbiQ	PF02361.16	gi|288560140|ref|YP_003423626.1|	-	1.9e-42	145.3	5.3	2.2e-42	145.2	5.3	1.0	1	0	0	1	1	1	1	Cobalt	transport	protein
CbiN	PF02553.15	gi|288560141|ref|YP_003423627.1|	-	1.1e-26	92.5	0.8	1.4e-26	92.2	0.8	1.1	1	0	0	1	1	1	1	Cobalt	transport	protein	component	CbiN
CbiM	PF01891.16	gi|288560142|ref|YP_003423628.1|	-	1.5e-53	181.8	18.3	1.6e-53	181.6	18.3	1.0	1	0	0	1	1	1	1	Cobalt	uptake	substrate-specific	transmembrane	region
TP_methylase	PF00590.20	gi|288560143|ref|YP_003423629.1|	-	3.7e-50	170.8	0.0	4.5e-50	170.5	0.0	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
CbiD	PF01888.17	gi|288560144|ref|YP_003423630.1|	-	1.1e-95	319.7	0.6	1.4e-95	319.4	0.6	1.1	1	0	0	1	1	1	1	CbiD
TP_methylase	PF00590.20	gi|288560145|ref|YP_003423631.1|	-	1e-40	140.0	0.0	1.2e-40	139.7	0.0	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
CbiG_N	PF11760.8	gi|288560146|ref|YP_003423632.1|	-	2.5e-35	120.3	0.2	4.6e-35	119.5	0.2	1.5	1	0	0	1	1	1	1	Cobalamin	synthesis	G	N-terminal
CbiG_C	PF01890.16	gi|288560146|ref|YP_003423632.1|	-	2.3e-33	115.2	0.0	4.5e-33	114.2	0.0	1.5	1	0	0	1	1	1	1	Cobalamin	synthesis	G	C-terminus
CbiG_mid	PF11761.8	gi|288560146|ref|YP_003423632.1|	-	2.9e-06	27.3	0.0	5.1e-06	26.5	0.0	1.4	1	0	0	1	1	1	1	Cobalamin	biosynthesis	central	region
TP_methylase	PF00590.20	gi|288560147|ref|YP_003423633.1|	-	2e-35	122.7	0.0	2.7e-35	122.2	0.0	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
CbiJ	PF02571.14	gi|288560148|ref|YP_003423634.1|	-	3.1e-68	229.8	0.0	3.7e-68	229.5	0.0	1.0	1	0	0	1	1	1	1	Precorrin-6x	reductase	CbiJ/CobK
ALMT	PF11744.8	gi|288560148|ref|YP_003423634.1|	-	0.15	10.9	0.0	0.26	10.1	0.0	1.3	1	0	0	1	1	1	0	Aluminium	activated	malate	transporter
PTCB-BRCT	PF12738.7	gi|288560148|ref|YP_003423634.1|	-	0.16	11.9	0.0	31	4.6	0.0	2.7	2	0	0	2	2	2	0	twin	BRCT	domain
TP_methylase	PF00590.20	gi|288560149|ref|YP_003423635.1|	-	5.6e-15	55.9	0.0	1.1e-14	54.9	0.0	1.5	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
Methyltransf_31	PF13847.6	gi|288560149|ref|YP_003423635.1|	-	1.1e-08	35.0	0.2	3.7e-08	33.3	0.2	1.9	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|288560149|ref|YP_003423635.1|	-	6.2e-06	26.8	0.0	1.6e-05	25.5	0.0	1.7	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|288560149|ref|YP_003423635.1|	-	0.00012	21.7	0.2	0.0005	19.7	0.0	2.1	2	0	0	2	2	2	1	Methyltransferase	small	domain
Methyltransf_18	PF12847.7	gi|288560149|ref|YP_003423635.1|	-	0.00018	21.5	0.1	0.00043	20.2	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_4	PF02390.17	gi|288560149|ref|YP_003423635.1|	-	0.00039	19.9	0.0	0.00083	18.9	0.0	1.5	1	0	0	1	1	1	1	Putative	methyltransferase
TehB	PF03848.14	gi|288560149|ref|YP_003423635.1|	-	0.00084	18.8	0.0	0.0016	17.9	0.0	1.4	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
Methyltransf_11	PF08241.12	gi|288560149|ref|YP_003423635.1|	-	0.0014	19.2	0.0	0.0032	18.1	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.15	gi|288560149|ref|YP_003423635.1|	-	0.0027	17.4	0.0	0.0047	16.6	0.0	1.3	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltransf_15	PF09445.10	gi|288560149|ref|YP_003423635.1|	-	0.004	16.7	0.1	0.0076	15.8	0.1	1.5	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_12	PF08242.12	gi|288560149|ref|YP_003423635.1|	-	0.0071	17.1	0.0	0.015	16.0	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
GidB	PF02527.15	gi|288560149|ref|YP_003423635.1|	-	0.011	15.1	0.0	0.018	14.4	0.0	1.3	1	0	0	1	1	1	0	rRNA	small	subunit	methyltransferase	G
DOT1	PF08123.13	gi|288560149|ref|YP_003423635.1|	-	0.017	14.6	0.0	0.13	11.8	0.0	2.1	2	0	0	2	2	2	0	Histone	methylation	protein	DOT1
Methyltransf_23	PF13489.6	gi|288560149|ref|YP_003423635.1|	-	0.052	13.4	0.0	0.082	12.7	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
PCMT	PF01135.19	gi|288560149|ref|YP_003423635.1|	-	0.12	12.2	0.0	0.18	11.5	0.0	1.4	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
GATase_3	PF07685.14	gi|288560150|ref|YP_003423636.1|	-	9.6e-22	77.5	0.0	1.5e-21	76.9	0.0	1.3	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
CbiA	PF01656.23	gi|288560150|ref|YP_003423636.1|	-	1.9e-12	47.4	0.0	3.2e-12	46.6	0.0	1.4	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_26	PF13500.6	gi|288560150|ref|YP_003423636.1|	-	2.5e-10	40.5	0.0	2.7e-08	33.9	0.0	2.7	2	1	0	2	2	2	1	AAA	domain
DUF1611	PF07755.11	gi|288560150|ref|YP_003423636.1|	-	0.00023	20.5	0.0	0.00037	19.8	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1611_C)	P-loop	domain
MobB	PF03205.14	gi|288560150|ref|YP_003423636.1|	-	0.0018	18.1	0.0	0.0043	16.9	0.0	1.6	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
DUF3674	PF12426.8	gi|288560150|ref|YP_003423636.1|	-	0.15	12.1	0.2	6.9	6.8	0.2	2.6	1	1	1	2	2	2	0	RNA	dependent	RNA	polymerase
CbiC	PF02570.15	gi|288560151|ref|YP_003423637.1|	-	1.7e-77	259.6	0.1	1.9e-77	259.4	0.1	1.0	1	0	0	1	1	1	1	Precorrin-8X	methylmutase
CbiK	PF06180.11	gi|288560152|ref|YP_003423638.1|	-	5e-85	285.0	4.2	5.6e-85	284.8	4.2	1.0	1	0	0	1	1	1	1	Cobalt	chelatase	(CbiK)
CbiX	PF01903.17	gi|288560152|ref|YP_003423638.1|	-	1.3e-09	38.3	0.0	5.4e-05	23.5	0.0	2.3	2	0	0	2	2	2	2	CbiX
DUF2313	PF10076.9	gi|288560152|ref|YP_003423638.1|	-	0.096	12.5	0.0	0.16	11.9	0.0	1.3	1	0	0	1	1	1	0	Uncharacterised	protein	conserved	in	bacteria	(DUF2313)
Mito_morph_reg	PF14972.6	gi|288560152|ref|YP_003423638.1|	-	0.17	11.5	0.0	0.27	10.8	0.0	1.3	1	0	0	1	1	1	0	Mitochondrial	morphogenesis	regulator
Peptidase_C14	PF00656.22	gi|288560152|ref|YP_003423638.1|	-	0.99	9.3	4.7	0.51	10.2	1.2	2.0	2	1	0	2	2	2	0	Caspase	domain
CarboxypepD_reg	PF13620.6	gi|288560153|ref|YP_003423639.1|	-	0.037	14.3	0.3	0.063	13.5	0.2	1.5	1	1	0	1	1	1	0	Carboxypeptidase	regulatory-like	domain
Big_1	PF02369.16	gi|288560153|ref|YP_003423639.1|	-	0.11	12.5	0.0	0.18	11.8	0.0	1.2	1	0	0	1	1	1	0	Bacterial	Ig-like	domain	(group	1)
phage_tail_N	PF08400.10	gi|288560153|ref|YP_003423639.1|	-	0.13	12.3	0.0	0.17	11.8	0.0	1.3	1	0	0	1	1	1	0	Prophage	tail	fibre	N-terminal
Methyltransf_11	PF08241.12	gi|288560154|ref|YP_003423640.1|	-	1e-15	58.2	0.0	1.6e-15	57.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|288560154|ref|YP_003423640.1|	-	6.5e-15	55.6	0.0	1.3e-14	54.6	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|288560154|ref|YP_003423640.1|	-	3.5e-14	52.9	0.2	4.7e-14	52.4	0.2	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|288560154|ref|YP_003423640.1|	-	4e-09	36.5	0.1	6.7e-09	35.8	0.1	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_9	PF08003.11	gi|288560154|ref|YP_003423640.1|	-	4.2e-08	32.5	0.0	5.7e-08	32.1	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1698)
Ubie_methyltran	PF01209.18	gi|288560154|ref|YP_003423640.1|	-	2.5e-06	27.0	0.1	1.5e-05	24.5	0.1	1.9	1	1	1	2	2	2	1	ubiE/COQ5	methyltransferase	family
Methyltransf_12	PF08242.12	gi|288560154|ref|YP_003423640.1|	-	3.7e-06	27.6	0.0	6.1e-06	26.9	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.20	gi|288560154|ref|YP_003423640.1|	-	0.0003	20.2	0.0	0.00051	19.4	0.0	1.4	1	1	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
PCMT	PF01135.19	gi|288560154|ref|YP_003423640.1|	-	0.0047	16.7	0.0	0.0065	16.2	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
PrmA	PF06325.13	gi|288560154|ref|YP_003423640.1|	-	0.0054	16.2	0.0	0.0083	15.6	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
RrnaAD	PF00398.20	gi|288560154|ref|YP_003423640.1|	-	0.01	14.9	0.0	0.012	14.7	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	RNA	adenine	dimethylase
Methyltransf_8	PF05148.15	gi|288560154|ref|YP_003423640.1|	-	0.036	13.9	0.1	0.24	11.2	0.1	2.1	1	1	0	1	1	1	0	Hypothetical	methyltransferase
MTS	PF05175.14	gi|288560154|ref|YP_003423640.1|	-	0.048	13.2	0.0	0.093	12.3	0.0	1.6	1	1	0	1	1	1	0	Methyltransferase	small	domain
N6_N4_Mtase	PF01555.18	gi|288560154|ref|YP_003423640.1|	-	0.11	12.2	0.1	0.25	11.0	0.1	1.6	2	0	0	2	2	2	0	DNA	methylase
TruB_C_2	PF16198.5	gi|288560155|ref|YP_003423641.1|	-	9e-26	89.8	0.0	1.7e-25	88.9	0.0	1.5	1	0	0	1	1	1	1	tRNA	pseudouridylate	synthase	B	C-terminal	domain
TruB_N	PF01509.18	gi|288560155|ref|YP_003423641.1|	-	1.2e-25	90.6	0.6	8.1e-22	78.2	0.6	3.2	1	1	0	1	1	1	1	TruB	family	pseudouridylate	synthase	(N	terminal	domain)
DKCLD	PF08068.12	gi|288560155|ref|YP_003423641.1|	-	5.1e-20	71.3	0.2	9.6e-20	70.4	0.2	1.5	1	0	0	1	1	1	1	DKCLD	(NUC011)	domain
PUA	PF01472.20	gi|288560155|ref|YP_003423641.1|	-	4.2e-17	61.9	0.2	9.3e-16	57.6	0.2	2.5	3	0	0	3	3	3	1	PUA	domain
TrmB	PF01978.19	gi|288560156|ref|YP_003423642.1|	-	0.0013	18.6	0.4	0.0022	17.8	0.4	1.4	1	1	1	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
z-alpha	PF02295.17	gi|288560156|ref|YP_003423642.1|	-	0.0025	17.8	0.6	0.003	17.6	0.6	1.1	1	0	0	1	1	1	1	Adenosine	deaminase	z-alpha	domain
Rrf2	PF02082.20	gi|288560156|ref|YP_003423642.1|	-	0.004	17.5	0.1	0.0048	17.2	0.1	1.1	1	0	0	1	1	1	1	Transcriptional	regulator
HHH_5	PF14520.6	gi|288560156|ref|YP_003423642.1|	-	0.016	15.8	0.5	0.022	15.3	0.5	1.2	1	0	0	1	1	1	0	Helix-hairpin-helix	domain
SMC_ScpB	PF04079.16	gi|288560156|ref|YP_003423642.1|	-	0.055	13.1	0.1	0.058	13.0	0.1	1.1	1	0	0	1	1	1	0	Segregation	and	condensation	complex	subunit	ScpB
Mrr_N	PF14338.6	gi|288560156|ref|YP_003423642.1|	-	0.077	13.1	0.1	0.089	12.9	0.1	1.1	1	0	0	1	1	1	0	Mrr	N-terminal	domain
Phage_rep_O	PF04492.13	gi|288560156|ref|YP_003423642.1|	-	0.079	13.5	0.1	0.093	13.3	0.1	1.1	1	0	0	1	1	1	0	Bacteriophage	replication	protein	O
Rio2_N	PF09202.11	gi|288560156|ref|YP_003423642.1|	-	0.14	12.4	0.1	0.17	12.1	0.1	1.1	1	0	0	1	1	1	0	Rio2,	N-terminal
Imm65	PF15582.6	gi|288560157|ref|YP_003423643.1|	-	0.0015	17.4	0.1	0.0029	16.5	0.0	1.3	1	1	0	1	1	1	1	Immunity	protein	65
Nit_Regul_Hom	PF10126.9	gi|288560157|ref|YP_003423643.1|	-	0.028	14.4	0.1	0.058	13.4	0.1	1.5	1	0	0	1	1	1	0	Uncharacterized	protein,	homolog	of	nitrogen	regulatory	protein	PII
DUF2085	PF09858.9	gi|288560158|ref|YP_003423644.1|	-	4.8e-32	110.3	1.3	5.8e-32	110.0	1.3	1.1	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2085)
SHOCT	PF09851.9	gi|288560160|ref|YP_003423646.1|	-	4.1e-10	39.1	3.3	1.1e-09	37.7	3.3	1.8	1	0	0	1	1	1	1	Short	C-terminal	domain
LCCL	PF03815.19	gi|288560160|ref|YP_003423646.1|	-	0.12	12.5	0.0	0.17	12.0	0.0	1.3	1	0	0	1	1	1	0	LCCL	domain
GvpG	PF05120.12	gi|288560160|ref|YP_003423646.1|	-	0.92	9.6	4.9	1	9.4	0.6	2.5	2	1	0	2	2	2	0	Gas	vesicle	protein	G
TPR_2	PF07719.17	gi|288560161|ref|YP_003423647.1|	-	0.0011	18.9	0.9	0.13	12.4	0.0	3.9	4	0	0	4	4	4	1	Tetratricopeptide	repeat
MerR-DNA-bind	PF09278.11	gi|288560161|ref|YP_003423647.1|	-	0.05	14.2	0.0	0.2	12.2	0.0	2.1	2	0	0	2	2	2	0	MerR,	DNA	binding
DUF2011	PF09428.10	gi|288560161|ref|YP_003423647.1|	-	0.16	12.2	0.1	0.35	11.1	0.1	1.6	1	0	0	1	1	1	0	Fungal	protein	of	unknown	function	(DUF2011)
TPR_8	PF13181.6	gi|288560161|ref|YP_003423647.1|	-	0.56	10.6	0.0	0.56	10.6	0.0	4.2	4	1	0	4	4	4	0	Tetratricopeptide	repeat
TPR_17	PF13431.6	gi|288560161|ref|YP_003423647.1|	-	2	9.0	4.3	1.2e+02	3.5	0.0	4.1	4	0	0	4	4	4	0	Tetratricopeptide	repeat
Ribosomal_S13	PF00416.22	gi|288560162|ref|YP_003423648.1|	-	4.7e-42	143.4	0.4	5.4e-42	143.2	0.4	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S13/S18
S4	PF01479.25	gi|288560163|ref|YP_003423649.1|	-	7.9e-15	54.3	0.1	1.7e-14	53.3	0.1	1.5	1	0	0	1	1	1	1	S4	domain
Ribosomal_S4	PF00163.19	gi|288560163|ref|YP_003423649.1|	-	8.4e-06	26.6	2.0	0.00045	21.1	0.3	2.2	2	0	0	2	2	2	2	Ribosomal	protein	S4/S9	N-terminal	domain
Ribosomal_S11	PF00411.19	gi|288560164|ref|YP_003423650.1|	-	3.8e-43	146.4	1.2	5.1e-43	146.0	1.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S11
MOSC	PF03473.17	gi|288560164|ref|YP_003423650.1|	-	0.09	12.8	0.0	0.1	12.7	0.0	1.1	1	0	0	1	1	1	0	MOSC	domain
RNA_pol_A_bac	PF01000.26	gi|288560165|ref|YP_003423651.1|	-	6.1e-28	97.4	0.0	1.2e-27	96.5	0.0	1.5	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/RpoA	insert	domain
RNA_pol_L	PF01193.24	gi|288560165|ref|YP_003423651.1|	-	4e-16	58.2	0.0	5.1e-16	57.9	0.0	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
RNA_pol_L_2	PF13656.6	gi|288560165|ref|YP_003423651.1|	-	0.0026	17.5	0.0	0.0077	16.0	0.0	1.7	2	0	0	2	2	2	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
Fer4_7	PF12838.7	gi|288560165|ref|YP_003423651.1|	-	0.084	13.5	0.8	0.084	13.5	0.8	1.9	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|288560165|ref|YP_003423651.1|	-	0.18	11.7	3.9	1.4	8.8	1.4	2.7	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Ribosomal_L18	PF17135.4	gi|288560166|ref|YP_003423652.1|	-	2.1e-13	50.1	0.0	2.1e-13	50.1	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	60S	L18	and	50S	L18e
Ribosomal_L27A	PF00828.19	gi|288560166|ref|YP_003423652.1|	-	1.1e-07	32.6	0.4	1.3e-07	32.3	0.4	1.2	1	0	0	1	1	1	1	Ribosomal	proteins	50S-L15,	50S-L18e,	60S-L27A
Ribosomal_L13	PF00572.18	gi|288560167|ref|YP_003423653.1|	-	6.4e-11	42.6	0.0	4.7e-09	36.6	0.0	2.1	1	1	0	1	1	1	1	Ribosomal	protein	L13
Ribosomal_S9	PF00380.19	gi|288560168|ref|YP_003423654.1|	-	1.3e-34	119.3	0.1	1.5e-34	119.2	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S9/S16
SnAC	PF14619.6	gi|288560168|ref|YP_003423654.1|	-	0.0019	18.7	0.2	0.003	18.1	0.2	1.3	1	0	0	1	1	1	1	Snf2-ATP	coupling,	chromatin	remodelling	complex
RNA_pol_N	PF01194.17	gi|288560169|ref|YP_003423655.1|	-	6.2e-25	87.3	0.3	6.5e-25	87.2	0.3	1.0	1	0	0	1	1	1	1	RNA	polymerases	N	/	8	kDa	subunit
RNA_pol_Rpb6	PF01192.22	gi|288560170|ref|YP_003423656.1|	-	1.4e-15	57.0	0.1	1.6e-15	56.7	0.1	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb6
RepB-RCR_reg	PF10723.9	gi|288560170|ref|YP_003423656.1|	-	0.12	12.4	0.6	0.19	11.7	0.6	1.4	1	1	0	1	1	1	0	Replication	regulatory	protein	RepB
Enolase_C	PF00113.22	gi|288560171|ref|YP_003423657.1|	-	5.1e-79	265.6	0.1	8.3e-79	264.9	0.1	1.2	1	0	0	1	1	1	1	Enolase,	C-terminal	TIM	barrel	domain
Enolase_N	PF03952.16	gi|288560171|ref|YP_003423657.1|	-	2.7e-39	134.3	0.1	5.1e-39	133.4	0.1	1.5	1	0	0	1	1	1	1	Enolase,	N-terminal	domain
MR_MLE_C	PF13378.6	gi|288560171|ref|YP_003423657.1|	-	6.4e-10	39.0	0.0	2.2e-09	37.2	0.0	1.8	2	0	0	2	2	2	1	Enolase	C-terminal	domain-like
MAAL_C	PF07476.11	gi|288560171|ref|YP_003423657.1|	-	0.00069	18.8	0.0	0.0016	17.7	0.0	1.6	1	0	0	1	1	1	1	Methylaspartate	ammonia-lyase	C-terminus
Fer4	PF00037.27	gi|288560172|ref|YP_003423658.1|	-	5.5e-10	38.6	18.8	3.5e-06	26.6	6.6	3.0	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|288560172|ref|YP_003423658.1|	-	9.4e-08	32.5	39.9	3.2e-05	24.4	15.5	2.0	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|288560172|ref|YP_003423658.1|	-	3.5e-07	30.3	13.7	4.8e-07	29.8	13.7	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|288560172|ref|YP_003423658.1|	-	4.1e-07	30.0	28.1	4.1e-06	26.8	14.1	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|288560172|ref|YP_003423658.1|	-	5.6e-07	29.6	16.2	6.6e-07	29.4	16.2	1.1	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|288560172|ref|YP_003423658.1|	-	3.6e-05	23.6	12.7	0.014	15.5	2.6	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|288560172|ref|YP_003423658.1|	-	0.00023	22.0	14.1	0.074	14.0	1.3	2.2	1	1	2	3	3	3	3	4Fe-4S	double	cluster	binding	domain
Fer4_6	PF12837.7	gi|288560172|ref|YP_003423658.1|	-	0.0016	18.4	3.9	0.0016	18.4	3.9	2.4	2	1	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|288560172|ref|YP_003423658.1|	-	0.0036	17.5	15.4	0.12	12.6	5.4	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|288560172|ref|YP_003423658.1|	-	0.0078	16.6	18.1	0.42	11.2	6.0	2.5	2	1	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|288560172|ref|YP_003423658.1|	-	0.017	15.7	16.5	0.35	11.4	5.2	2.2	1	1	1	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_17	PF13534.6	gi|288560172|ref|YP_003423658.1|	-	0.054	14.0	16.6	1.5	9.4	3.3	2.2	1	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|288560172|ref|YP_003423658.1|	-	0.089	13.8	19.2	0.91	10.6	2.5	2.5	2	1	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|288560172|ref|YP_003423658.1|	-	0.15	12.5	16.2	30	5.2	16.2	2.2	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|288560172|ref|YP_003423658.1|	-	1.7	9.4	19.5	2.3	9.0	5.0	2.8	1	1	2	3	3	3	0	4Fe-4S	single	cluster	domain
Ribosomal_S2	PF00318.20	gi|288560173|ref|YP_003423659.1|	-	3e-28	98.5	0.0	1e-13	51.0	0.1	2.0	1	1	1	2	2	2	2	Ribosomal	protein	S2
CSN8_PSD8_EIF3K	PF10075.9	gi|288560175|ref|YP_003423661.1|	-	0.012	15.6	0.0	0.016	15.2	0.0	1.3	1	0	0	1	1	1	0	CSN8/PSMD8/EIF3K	family
Memo	PF01875.17	gi|288560176|ref|YP_003423662.1|	-	5.3e-74	248.8	0.1	6e-74	248.6	0.1	1.0	1	0	0	1	1	1	1	Memo-like	protein
LigB	PF02900.18	gi|288560176|ref|YP_003423662.1|	-	0.019	14.0	0.1	0.027	13.5	0.1	1.3	1	0	0	1	1	1	0	Catalytic	LigB	subunit	of	aromatic	ring-opening	dioxygenase
GHMP_kinases_C	PF08544.13	gi|288560177|ref|YP_003423663.1|	-	1.2e-15	57.6	0.4	4.7e-15	55.7	0.1	2.0	2	0	0	2	2	2	1	GHMP	kinases	C	terminal
GHMP_kinases_N	PF00288.26	gi|288560177|ref|YP_003423663.1|	-	2.9e-14	53.0	0.3	6e-14	52.0	0.3	1.6	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
Flagellin_IN	PF07196.13	gi|288560177|ref|YP_003423663.1|	-	0.023	14.9	2.1	0.07	13.3	2.1	1.8	1	0	0	1	1	1	0	Flagellin	hook	IN	motif
E3_binding	PF02817.17	gi|288560177|ref|YP_003423663.1|	-	0.032	14.6	0.4	0.11	12.9	0.4	2.0	1	0	0	1	1	1	0	e3	binding	domain
GalKase_gal_bdg	PF10509.9	gi|288560177|ref|YP_003423663.1|	-	0.06	12.9	0.0	0.18	11.4	0.0	1.8	1	0	0	1	1	1	0	Galactokinase	galactose-binding	signature
AA_kinase	PF00696.28	gi|288560178|ref|YP_003423664.1|	-	3.1e-46	158.0	0.1	3.5e-46	157.8	0.1	1.0	1	0	0	1	1	1	1	Amino	acid	kinase	family
FMN_dh	PF01070.18	gi|288560179|ref|YP_003423665.1|	-	2.2e-27	96.0	0.0	5.7e-16	58.5	0.1	2.3	2	1	0	2	2	2	2	FMN-dependent	dehydrogenase
IMPDH	PF00478.25	gi|288560179|ref|YP_003423665.1|	-	9.6e-05	21.5	4.7	0.068	12.2	2.2	3.4	2	1	1	3	3	3	2	IMP	dehydrogenase	/	GMP	reductase	domain
DUF561	PF04481.12	gi|288560179|ref|YP_003423665.1|	-	0.00018	20.7	0.0	0.00073	18.8	0.0	1.8	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF561)
SOR_SNZ	PF01680.17	gi|288560179|ref|YP_003423665.1|	-	0.0012	18.6	0.6	0.0029	17.4	0.2	1.8	2	0	0	2	2	2	1	SOR/SNZ	family
NMO	PF03060.15	gi|288560179|ref|YP_003423665.1|	-	0.031	13.7	1.1	0.11	11.8	0.3	2.0	2	0	0	2	2	2	0	Nitronate	monooxygenase
His_biosynth	PF00977.21	gi|288560179|ref|YP_003423665.1|	-	0.12	11.8	1.3	18	4.7	0.1	3.1	3	1	1	4	4	4	0	Histidine	biosynthesis	protein
RMMBL	PF07521.12	gi|288560180|ref|YP_003423666.1|	-	1.1e-13	50.9	0.6	4.2e-12	45.8	0.1	2.7	2	0	0	2	2	2	1	Zn-dependent	metallo-hydrolase	RNA	specificity	domain
Lactamase_B	PF00753.27	gi|288560180|ref|YP_003423666.1|	-	6.6e-09	36.0	1.8	2e-08	34.5	1.8	1.9	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|288560180|ref|YP_003423666.1|	-	2e-08	34.0	0.1	5e-08	32.7	0.1	1.6	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Hexapep	PF00132.24	gi|288560180|ref|YP_003423666.1|	-	0.4	10.5	2.5	31	4.5	0.0	3.5	3	0	0	3	3	3	0	Bacterial	transferase	hexapeptide	(six	repeats)
polyprenyl_synt	PF00348.17	gi|288560181|ref|YP_003423667.1|	-	2e-78	263.0	1.1	2.4e-78	262.7	1.1	1.1	1	0	0	1	1	1	1	Polyprenyl	synthetase
Methyltransf_11	PF08241.12	gi|288560182|ref|YP_003423668.1|	-	9.1e-13	48.7	0.0	3.2e-12	46.9	0.0	1.9	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|288560182|ref|YP_003423668.1|	-	5.1e-11	42.7	0.2	9.5e-11	41.8	0.0	1.6	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|288560182|ref|YP_003423668.1|	-	2e-05	25.2	0.0	8.1e-05	23.2	0.0	2.1	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|288560182|ref|YP_003423668.1|	-	4.1e-05	23.4	0.0	8.6e-05	22.4	0.0	1.7	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|288560182|ref|YP_003423668.1|	-	0.00016	22.4	0.9	0.00061	20.5	0.0	2.4	3	0	0	3	3	3	1	Methyltransferase	domain
zf-ribbon_3	PF13248.6	gi|288560182|ref|YP_003423668.1|	-	0.0016	17.8	0.6	0.38	10.2	0.1	2.3	2	0	0	2	2	2	2	zinc-ribbon	domain
Ubie_methyltran	PF01209.18	gi|288560182|ref|YP_003423668.1|	-	0.0021	17.5	0.0	0.0033	16.8	0.0	1.3	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
FadA	PF09403.10	gi|288560182|ref|YP_003423668.1|	-	0.0024	18.3	8.5	0.0024	18.3	8.5	1.9	2	0	0	2	2	2	1	Adhesion	protein	FadA
zinc_ribbon_2	PF13240.6	gi|288560182|ref|YP_003423668.1|	-	0.022	14.4	3.3	0.083	12.6	0.4	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-RING_7	PF02591.15	gi|288560182|ref|YP_003423668.1|	-	0.024	14.8	0.9	0.47	10.7	0.1	2.5	2	0	0	2	2	2	0	C4-type	zinc	ribbon	domain
DZR	PF12773.7	gi|288560182|ref|YP_003423668.1|	-	0.046	13.8	1.0	0.11	12.6	1.0	1.5	1	1	0	1	1	1	0	Double	zinc	ribbon
TF_Zn_Ribbon	PF08271.12	gi|288560182|ref|YP_003423668.1|	-	0.12	11.9	0.4	21	4.7	0.1	2.7	2	0	0	2	2	2	0	TFIIB	zinc-binding
zf-Di19	PF05605.12	gi|288560182|ref|YP_003423668.1|	-	0.38	11.1	2.5	17	5.8	0.1	2.5	2	0	0	2	2	2	0	Drought	induced	19	protein	(Di19),	zinc-binding
zf-CHCC	PF10276.9	gi|288560182|ref|YP_003423668.1|	-	0.47	10.6	4.0	3.9	7.6	0.2	2.4	2	0	0	2	2	2	0	Zinc-finger	domain
Glutaredoxin	PF00462.24	gi|288560182|ref|YP_003423668.1|	-	0.77	10.0	6.9	34	4.7	0.2	4.4	5	0	0	5	5	5	0	Glutaredoxin
Herpes_capsid	PF06112.11	gi|288560183|ref|YP_003423669.1|	-	0.0077	16.3	0.2	0.011	15.9	0.2	1.2	1	0	0	1	1	1	1	Gammaherpesvirus	capsid	protein
Methylase_S	PF01420.19	gi|288560184|ref|YP_003423670.1|	-	4.8e-05	23.6	3.7	6.8e-05	23.1	3.7	1.3	1	1	0	1	1	1	1	Type	I	restriction	modification	DNA	specificity	domain
N6_Mtase	PF02384.16	gi|288560185|ref|YP_003423671.1|	-	6e-88	295.1	1.7	8.9e-88	294.5	1.7	1.3	1	0	0	1	1	1	1	N-6	DNA	Methylase
HsdM_N	PF12161.8	gi|288560185|ref|YP_003423671.1|	-	8.9e-10	39.3	3.0	8.9e-10	39.3	3.0	2.7	3	1	0	3	3	3	1	HsdM	N-terminal	domain
AviRa	PF11599.8	gi|288560185|ref|YP_003423671.1|	-	0.0019	17.7	0.0	0.0041	16.6	0.0	1.6	1	0	0	1	1	1	1	RRNA	methyltransferase	AviRa
Methyltransf_31	PF13847.6	gi|288560185|ref|YP_003423671.1|	-	0.04	13.7	0.0	0.1	12.4	0.0	1.7	1	0	0	1	1	1	0	Methyltransferase	domain
B5	PF03484.15	gi|288560185|ref|YP_003423671.1|	-	0.04	14.2	0.1	0.14	12.5	0.1	1.9	1	0	0	1	1	1	0	tRNA	synthetase	B5	domain
Methyltransf_25	PF13649.6	gi|288560185|ref|YP_003423671.1|	-	0.05	14.3	0.0	0.19	12.4	0.0	2.0	2	0	0	2	2	2	0	Methyltransferase	domain
YscO	PF07321.12	gi|288560185|ref|YP_003423671.1|	-	0.099	12.6	1.1	0.2	11.6	1.1	1.4	1	0	0	1	1	1	0	Type	III	secretion	protein	YscO
DHH	PF01368.20	gi|288560186|ref|YP_003423672.1|	-	3.8e-26	91.3	0.1	6.9e-26	90.4	0.1	1.4	1	0	0	1	1	1	1	DHH	family
DHHA2	PF02833.14	gi|288560186|ref|YP_003423672.1|	-	1.1e-20	74.3	0.8	1.8e-20	73.5	0.8	1.4	1	0	0	1	1	1	1	DHHA2	domain
zinc_ribbon_2	PF13240.6	gi|288560187|ref|YP_003423673.1|	-	3.7e-07	29.6	5.9	3.7e-07	29.6	5.9	1.9	2	0	0	2	2	2	1	zinc-ribbon	domain
DZR	PF12773.7	gi|288560187|ref|YP_003423673.1|	-	3.7e-05	23.6	1.5	6.6e-05	22.9	1.5	1.5	1	0	0	1	1	1	1	Double	zinc	ribbon
EVI2A	PF05399.11	gi|288560187|ref|YP_003423673.1|	-	0.00035	20.3	1.3	0.00036	20.2	1.3	1.0	1	0	0	1	1	1	1	Ectropic	viral	integration	site	2A	protein	(EVI2A)
DUF1837	PF08878.11	gi|288560187|ref|YP_003423673.1|	-	0.0056	16.5	0.8	0.0064	16.3	0.8	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1837)
zf-ribbon_3	PF13248.6	gi|288560187|ref|YP_003423673.1|	-	0.017	14.5	3.1	0.037	13.5	3.1	1.6	1	0	0	1	1	1	0	zinc-ribbon	domain
TMEM154	PF15102.6	gi|288560187|ref|YP_003423673.1|	-	0.041	13.8	0.2	0.054	13.4	0.2	1.3	1	0	0	1	1	1	0	TMEM154	protein	family
Nudix_N_2	PF14803.6	gi|288560187|ref|YP_003423673.1|	-	0.09	12.7	4.0	3.1	7.8	1.7	2.3	2	0	0	2	2	2	0	Nudix	N-terminal
zf_UBZ	PF18439.1	gi|288560187|ref|YP_003423673.1|	-	3.3	7.4	5.3	7.5	6.2	0.1	2.3	2	0	0	2	2	2	0	Ubiquitin-Binding	Zinc	Finger
A2L_zn_ribbon	PF08792.10	gi|288560187|ref|YP_003423673.1|	-	6.2	6.7	14.7	4	7.3	0.1	3.4	3	0	0	3	3	3	0	A2L	zinc	ribbon	domain
NOB1_Zn_bind	PF08772.11	gi|288560187|ref|YP_003423673.1|	-	6.3	7.0	9.0	5.9	7.1	4.2	2.5	1	1	2	3	3	3	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
Aldo_ket_red	PF00248.21	gi|288560189|ref|YP_003423675.1|	-	2.4e-32	112.3	0.2	1.1e-30	106.9	0.2	2.1	1	1	0	1	1	1	1	Aldo/keto	reductase	family
Fer4_17	PF13534.6	gi|288560189|ref|YP_003423675.1|	-	1.1e-07	32.3	9.7	1.1e-07	32.3	9.7	1.8	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|288560189|ref|YP_003423675.1|	-	1.5e-06	28.2	9.9	1.5e-06	28.2	9.9	2.0	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|288560189|ref|YP_003423675.1|	-	0.00015	22.1	8.1	0.00015	22.1	8.1	1.8	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|288560189|ref|YP_003423675.1|	-	0.0052	16.9	0.5	0.0052	16.9	0.5	2.5	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|288560189|ref|YP_003423675.1|	-	0.0078	16.0	9.5	0.028	14.2	2.6	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|288560189|ref|YP_003423675.1|	-	0.068	13.3	9.2	1	9.5	0.2	2.3	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|288560189|ref|YP_003423675.1|	-	0.59	11.0	7.9	3.2	8.7	0.4	2.4	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|288560189|ref|YP_003423675.1|	-	1.5	9.1	11.3	0.39	10.9	1.2	2.3	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|288560189|ref|YP_003423675.1|	-	4.5	8.0	18.3	1.8	9.2	13.8	2.4	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Methyltransf_31	PF13847.6	gi|288560190|ref|YP_003423676.1|	-	2.4e-15	56.6	0.5	3.3e-15	56.2	0.5	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|288560190|ref|YP_003423676.1|	-	9.1e-15	55.2	0.0	4e-14	53.1	0.0	2.0	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|288560190|ref|YP_003423676.1|	-	5e-11	43.1	0.0	1.1e-10	42.0	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|288560190|ref|YP_003423676.1|	-	9.1e-10	39.2	0.1	2.4e-09	37.8	0.1	1.7	1	0	0	1	1	1	1	Methyltransferase	domain
TehB	PF03848.14	gi|288560190|ref|YP_003423676.1|	-	1.2e-08	34.6	0.5	2.2e-08	33.8	0.5	1.4	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
NodS	PF05401.11	gi|288560190|ref|YP_003423676.1|	-	1.2e-07	31.5	0.0	1.6e-07	31.1	0.0	1.2	1	0	0	1	1	1	1	Nodulation	protein	S	(NodS)
RrnaAD	PF00398.20	gi|288560190|ref|YP_003423676.1|	-	1.5e-07	30.8	0.3	2.1e-07	30.3	0.3	1.4	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_23	PF13489.6	gi|288560190|ref|YP_003423676.1|	-	2.5e-07	30.7	0.0	3.8e-07	30.1	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|288560190|ref|YP_003423676.1|	-	2.6e-06	27.1	0.1	4.3e-06	26.4	0.1	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Ubie_methyltran	PF01209.18	gi|288560190|ref|YP_003423676.1|	-	4.7e-06	26.1	0.3	6.8e-06	25.6	0.3	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_4	PF02390.17	gi|288560190|ref|YP_003423676.1|	-	2.2e-05	24.0	0.1	4.5e-05	23.0	0.1	1.5	1	0	0	1	1	1	1	Putative	methyltransferase
PCMT	PF01135.19	gi|288560190|ref|YP_003423676.1|	-	0.0002	21.2	0.0	0.0003	20.6	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
CMAS	PF02353.20	gi|288560190|ref|YP_003423676.1|	-	0.00034	20.0	0.3	0.0021	17.4	0.0	2.0	2	0	0	2	2	2	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_18	PF12847.7	gi|288560190|ref|YP_003423676.1|	-	0.00081	19.4	0.2	0.0014	18.5	0.2	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
MetW	PF07021.12	gi|288560190|ref|YP_003423676.1|	-	0.0017	18.0	0.0	0.0027	17.3	0.0	1.3	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
DREV	PF05219.12	gi|288560190|ref|YP_003423676.1|	-	0.0031	16.7	0.1	0.0045	16.1	0.1	1.3	1	0	0	1	1	1	1	DREV	methyltransferase
GidB	PF02527.15	gi|288560190|ref|YP_003423676.1|	-	0.0036	16.7	1.0	0.0093	15.3	0.2	2.0	2	1	1	3	3	3	1	rRNA	small	subunit	methyltransferase	G
FtsJ	PF01728.19	gi|288560190|ref|YP_003423676.1|	-	0.0055	16.8	0.0	0.0078	16.3	0.0	1.2	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
Methyltransf_32	PF13679.6	gi|288560190|ref|YP_003423676.1|	-	0.041	13.9	0.1	0.12	12.4	0.1	1.6	1	1	0	1	1	1	0	Methyltransferase	domain
Methyltr_RsmB-F	PF01189.17	gi|288560190|ref|YP_003423676.1|	-	0.043	13.4	0.1	0.072	12.7	0.1	1.3	1	0	0	1	1	1	0	16S	rRNA	methyltransferase	RsmB/F
Methyltransf_25	PF13649.6	gi|288560191|ref|YP_003423677.1|	-	3.6e-15	56.5	0.0	7.8e-15	55.4	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|288560191|ref|YP_003423677.1|	-	1.2e-14	54.4	0.3	2.4e-14	53.4	0.3	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|288560191|ref|YP_003423677.1|	-	4.7e-14	52.8	0.0	1.7e-13	51.0	0.0	1.8	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|288560191|ref|YP_003423677.1|	-	1.9e-11	44.1	0.0	2.7e-11	43.6	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|288560191|ref|YP_003423677.1|	-	2e-11	44.5	0.0	4.8e-11	43.3	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.20	gi|288560191|ref|YP_003423677.1|	-	2.3e-09	36.7	0.3	3.4e-09	36.2	0.3	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
TehB	PF03848.14	gi|288560191|ref|YP_003423677.1|	-	4.5e-09	36.0	0.5	7.3e-09	35.3	0.5	1.3	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
Ubie_methyltran	PF01209.18	gi|288560191|ref|YP_003423677.1|	-	1.1e-07	31.5	0.3	1.6e-07	30.9	0.3	1.3	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
MetW	PF07021.12	gi|288560191|ref|YP_003423677.1|	-	1.7e-07	31.1	0.0	2.7e-07	30.4	0.0	1.3	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
MTS	PF05175.14	gi|288560191|ref|YP_003423677.1|	-	3.6e-07	29.9	0.1	5.4e-07	29.3	0.1	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
GidB	PF02527.15	gi|288560191|ref|YP_003423677.1|	-	5.9e-07	29.0	0.3	1.1e-06	28.1	0.1	1.5	2	0	0	2	2	2	1	rRNA	small	subunit	methyltransferase	G
NodS	PF05401.11	gi|288560191|ref|YP_003423677.1|	-	1.7e-05	24.6	0.0	2.4e-05	24.0	0.0	1.2	1	0	0	1	1	1	1	Nodulation	protein	S	(NodS)
Methyltransf_18	PF12847.7	gi|288560191|ref|YP_003423677.1|	-	2.9e-05	24.0	0.2	5.5e-05	23.1	0.2	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Met_10	PF02475.16	gi|288560191|ref|YP_003423677.1|	-	5.7e-05	22.9	0.2	9e-05	22.3	0.2	1.3	1	0	0	1	1	1	1	Met-10+	like-protein
Cons_hypoth95	PF03602.15	gi|288560191|ref|YP_003423677.1|	-	0.00018	21.2	0.0	0.00031	20.4	0.0	1.3	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltransf_4	PF02390.17	gi|288560191|ref|YP_003423677.1|	-	0.00023	20.7	0.2	0.00048	19.6	0.1	1.6	2	0	0	2	2	2	1	Putative	methyltransferase
PrmA	PF06325.13	gi|288560191|ref|YP_003423677.1|	-	0.00025	20.5	0.3	0.00025	20.5	0.3	1.6	2	0	0	2	2	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
DREV	PF05219.12	gi|288560191|ref|YP_003423677.1|	-	0.00042	19.5	0.1	0.00059	19.0	0.1	1.2	1	0	0	1	1	1	1	DREV	methyltransferase
Methyltransf_15	PF09445.10	gi|288560191|ref|YP_003423677.1|	-	0.00068	19.2	0.1	0.00096	18.8	0.1	1.2	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Methyltr_RsmB-F	PF01189.17	gi|288560191|ref|YP_003423677.1|	-	0.00074	19.2	0.1	0.0013	18.4	0.1	1.3	1	0	0	1	1	1	1	16S	rRNA	methyltransferase	RsmB/F
PCMT	PF01135.19	gi|288560191|ref|YP_003423677.1|	-	0.00079	19.2	0.0	0.0011	18.8	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
tRNA_U5-meth_tr	PF05958.11	gi|288560191|ref|YP_003423677.1|	-	0.0032	16.5	0.0	0.0048	15.9	0.0	1.3	1	0	0	1	1	1	1	tRNA	(Uracil-5-)-methyltransferase
CMAS	PF02353.20	gi|288560191|ref|YP_003423677.1|	-	0.005	16.2	0.1	0.0069	15.7	0.1	1.2	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
DUF43	PF01861.16	gi|288560191|ref|YP_003423677.1|	-	0.0054	16.0	0.1	0.01	15.1	0.1	1.5	1	0	0	1	1	1	1	Branched-chain	polyamine	synthase	A	C-terminal	domain
FtsJ	PF01728.19	gi|288560191|ref|YP_003423677.1|	-	0.018	15.2	0.0	0.028	14.5	0.0	1.3	1	1	0	1	1	1	0	FtsJ-like	methyltransferase
Methyltransf_32	PF13679.6	gi|288560191|ref|YP_003423677.1|	-	0.028	14.4	0.0	0.049	13.6	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|288560192|ref|YP_003423678.1|	-	1.1e-13	51.7	0.0	2e-13	50.9	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|288560192|ref|YP_003423678.1|	-	1.3e-12	47.8	0.0	1.7e-12	47.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|288560192|ref|YP_003423678.1|	-	1.4e-11	44.9	0.0	2.3e-11	44.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|288560192|ref|YP_003423678.1|	-	2.8e-09	37.6	0.1	6.4e-09	36.5	0.1	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.20	gi|288560192|ref|YP_003423678.1|	-	9.7e-09	34.7	0.1	1.3e-08	34.2	0.1	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
TehB	PF03848.14	gi|288560192|ref|YP_003423678.1|	-	1.2e-08	34.7	0.6	1.9e-08	34.0	0.6	1.3	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
MTS	PF05175.14	gi|288560192|ref|YP_003423678.1|	-	2.7e-08	33.5	0.1	4.8e-08	32.7	0.1	1.4	1	1	0	1	1	1	1	Methyltransferase	small	domain
Ubie_methyltran	PF01209.18	gi|288560192|ref|YP_003423678.1|	-	3.6e-08	33.0	0.1	5.6e-08	32.4	0.1	1.4	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_23	PF13489.6	gi|288560192|ref|YP_003423678.1|	-	4.9e-07	29.7	0.0	7.2e-07	29.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.13	gi|288560192|ref|YP_003423678.1|	-	1.4e-05	24.7	1.7	1.4e-05	24.7	1.7	1.8	2	0	0	2	2	2	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
MetW	PF07021.12	gi|288560192|ref|YP_003423678.1|	-	6.1e-05	22.7	0.0	8.9e-05	22.2	0.0	1.3	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
GidB	PF02527.15	gi|288560192|ref|YP_003423678.1|	-	8.3e-05	22.0	0.2	0.00015	21.1	0.0	1.5	2	0	0	2	2	2	1	rRNA	small	subunit	methyltransferase	G
Methyltransf_4	PF02390.17	gi|288560192|ref|YP_003423678.1|	-	9.6e-05	21.9	0.1	0.00017	21.1	0.1	1.4	1	0	0	1	1	1	1	Putative	methyltransferase
Met_10	PF02475.16	gi|288560192|ref|YP_003423678.1|	-	0.00016	21.5	0.2	0.00024	20.9	0.2	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_18	PF12847.7	gi|288560192|ref|YP_003423678.1|	-	0.00034	20.5	0.2	0.00056	19.9	0.2	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.10	gi|288560192|ref|YP_003423678.1|	-	0.00064	19.3	0.0	0.001	18.7	0.0	1.4	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Methyltr_RsmB-F	PF01189.17	gi|288560192|ref|YP_003423678.1|	-	0.0019	17.9	0.1	0.0031	17.2	0.1	1.3	1	0	0	1	1	1	1	16S	rRNA	methyltransferase	RsmB/F
PCMT	PF01135.19	gi|288560192|ref|YP_003423678.1|	-	0.0024	17.7	0.0	0.0036	17.1	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
tRNA_U5-meth_tr	PF05958.11	gi|288560192|ref|YP_003423678.1|	-	0.0026	16.8	0.0	0.0044	16.1	0.0	1.5	1	0	0	1	1	1	1	tRNA	(Uracil-5-)-methyltransferase
NodS	PF05401.11	gi|288560192|ref|YP_003423678.1|	-	0.003	17.2	0.0	0.004	16.8	0.0	1.2	1	0	0	1	1	1	1	Nodulation	protein	S	(NodS)
DOT1	PF08123.13	gi|288560192|ref|YP_003423678.1|	-	0.0042	16.6	0.0	0.0082	15.7	0.0	1.5	1	0	0	1	1	1	1	Histone	methylation	protein	DOT1
Methyltransf_32	PF13679.6	gi|288560192|ref|YP_003423678.1|	-	0.0046	17.0	0.0	0.007	16.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.20	gi|288560192|ref|YP_003423678.1|	-	0.0092	15.3	0.0	0.018	14.3	0.0	1.5	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Cons_hypoth95	PF03602.15	gi|288560192|ref|YP_003423678.1|	-	0.017	14.8	0.0	0.028	14.0	0.0	1.3	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
DREV	PF05219.12	gi|288560192|ref|YP_003423678.1|	-	0.023	13.8	0.0	0.033	13.3	0.0	1.2	1	0	0	1	1	1	0	DREV	methyltransferase
DUF43	PF01861.16	gi|288560192|ref|YP_003423678.1|	-	0.039	13.2	0.2	0.071	12.3	0.2	1.5	1	0	0	1	1	1	0	Branched-chain	polyamine	synthase	A	C-terminal	domain
Tox-HNH-HHH	PF15637.6	gi|288560192|ref|YP_003423678.1|	-	0.054	13.6	0.2	7.4	6.8	0.0	2.2	2	0	0	2	2	2	0	HNH/Endo	VII	superfamily	nuclease	toxin	with	a	HHH	motif
UPF0020	PF01170.18	gi|288560192|ref|YP_003423678.1|	-	0.37	10.4	1.2	3.6	7.2	1.2	2.1	1	1	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
APG6_N	PF17675.1	gi|288560193|ref|YP_003423679.1|	-	0.0072	16.9	0.1	0.0094	16.5	0.1	1.3	1	0	0	1	1	1	1	Apg6	coiled-coil	region
MAP65_ASE1	PF03999.12	gi|288560193|ref|YP_003423679.1|	-	0.013	14.3	0.1	0.013	14.2	0.1	1.0	1	0	0	1	1	1	0	Microtubule	associated	protein	(MAP65/ASE1	family)
ocr	PF08684.10	gi|288560193|ref|YP_003423679.1|	-	0.018	15.5	0.1	0.035	14.5	0.1	1.6	1	0	0	1	1	1	0	DNA	mimic	ocr
MetOD1	PF18546.1	gi|288560193|ref|YP_003423679.1|	-	0.036	14.1	0.2	0.12	12.4	0.1	2.0	1	1	0	1	1	1	0	Metanogen	output	domain	1
Mak10	PF04112.13	gi|288560193|ref|YP_003423679.1|	-	0.073	12.6	0.0	0.16	11.5	0.0	1.6	1	0	0	1	1	1	0	Mak10	subunit,	NatC	N(alpha)-terminal	acetyltransferase
SOXp	PF12336.8	gi|288560193|ref|YP_003423679.1|	-	0.15	13.1	0.0	0.21	12.7	0.0	1.4	1	0	0	1	1	1	0	SOX	transcription	factor
HTH_45	PF14947.6	gi|288560194|ref|YP_003423680.1|	-	0.00016	21.6	1.1	0.00021	21.2	0.7	1.4	1	1	1	2	2	2	1	Winged	helix-turn-helix
HTH_Crp_2	PF13545.6	gi|288560194|ref|YP_003423680.1|	-	0.034	14.1	0.0	0.058	13.4	0.0	1.5	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
PadR	PF03551.14	gi|288560194|ref|YP_003423680.1|	-	0.037	14.0	0.0	0.047	13.6	0.0	1.3	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
PmrD	PF11183.8	gi|288560194|ref|YP_003423680.1|	-	0.039	14.1	0.2	0.05	13.7	0.2	1.3	1	0	0	1	1	1	0	Polymyxin	resistance	protein	PmrD
TrmB	PF01978.19	gi|288560194|ref|YP_003423680.1|	-	0.049	13.5	0.1	0.07	13.0	0.1	1.4	1	1	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
Ribosomal_S4e	PF00900.20	gi|288560194|ref|YP_003423680.1|	-	0.065	13.1	0.4	9	6.3	0.0	2.1	1	1	1	2	2	2	0	Ribosomal	family	S4e
HTH_34	PF13601.6	gi|288560194|ref|YP_003423680.1|	-	0.076	13.2	0.0	0.1	12.8	0.0	1.2	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_27	PF13463.6	gi|288560194|ref|YP_003423680.1|	-	0.13	12.8	0.0	0.16	12.5	0.0	1.2	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
tRNA-synt_1c	PF00749.21	gi|288560195|ref|YP_003423681.1|	-	1.5e-81	273.8	0.0	2.5e-81	273.0	0.0	1.3	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
tRNA-synt_1c_C	PF03950.18	gi|288560195|ref|YP_003423681.1|	-	2.3e-27	96.0	0.0	5.2e-27	94.8	0.0	1.6	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(E	and	Q),	anti-codon	binding	domain
AAA_33	PF13671.6	gi|288560196|ref|YP_003423682.1|	-	2.8e-12	47.0	0.0	1.2e-09	38.4	0.0	2.1	1	1	0	1	1	1	1	AAA	domain
Zeta_toxin	PF06414.12	gi|288560196|ref|YP_003423682.1|	-	0.0028	17.0	0.0	0.11	11.8	0.0	2.1	1	1	1	2	2	2	2	Zeta	toxin
AAA_24	PF13479.6	gi|288560196|ref|YP_003423682.1|	-	0.015	15.0	0.0	0.02	14.6	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
SRPRB	PF09439.10	gi|288560196|ref|YP_003423682.1|	-	0.095	12.1	0.0	0.12	11.8	0.0	1.3	1	0	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
Roc	PF08477.13	gi|288560196|ref|YP_003423682.1|	-	0.16	12.2	0.0	0.26	11.5	0.0	1.4	1	1	0	1	1	1	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
AAA_22	PF13401.6	gi|288560196|ref|YP_003423682.1|	-	0.21	11.9	0.0	0.28	11.5	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
PT	PF04886.12	gi|288560197|ref|YP_003423683.1|	-	0.0085	15.6	15.0	1.1	8.9	15.0	3.2	1	1	0	1	1	1	1	PT	repeat
Aminotran_1_2	PF00155.21	gi|288560198|ref|YP_003423684.1|	-	2.8e-34	118.9	0.0	1.1e-33	116.9	0.0	1.8	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.19	gi|288560198|ref|YP_003423684.1|	-	0.1	11.6	0.0	0.15	11.0	0.0	1.2	1	0	0	1	1	1	0	Aminotransferase	class-V
AHSP	PF09236.10	gi|288560201|ref|YP_003423687.1|	-	0.027	14.9	0.1	0.076	13.5	0.1	1.8	1	0	0	1	1	1	0	Alpha-haemoglobin	stabilising	protein
Endonuc-dimeris	PF09124.10	gi|288560201|ref|YP_003423687.1|	-	0.21	11.8	2.5	0.39	10.9	1.7	1.8	1	1	0	1	1	1	0	T4	recombination	endonuclease	VII,	dimerisation
Adenylsucc_synt	PF00709.21	gi|288560203|ref|YP_003423689.1|	-	1e-92	311.3	0.2	3.5e-44	151.4	0.0	3.0	1	1	2	3	3	3	3	Adenylosuccinate	synthetase
F420_ligase	PF01996.16	gi|288560204|ref|YP_003423690.1|	-	3e-81	272.4	0.1	3.8e-81	272.0	0.1	1.1	1	0	0	1	1	1	1	F420-0:Gamma-glutamyl	ligase
Zn_Tnp_IS1595	PF12760.7	gi|288560205|ref|YP_003423691.1|	-	2.6e-09	36.9	0.5	4e-09	36.3	0.5	1.3	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
Zn-ribbon_8	PF09723.10	gi|288560205|ref|YP_003423691.1|	-	0.00091	19.3	0.1	0.37	10.9	0.1	2.3	2	0	0	2	2	2	1	Zinc	ribbon	domain
DpnI	PF06044.12	gi|288560205|ref|YP_003423691.1|	-	0.0042	16.7	0.5	0.0055	16.4	0.5	1.2	1	0	0	1	1	1	1	Dam-replacing	family
Zn_Tnp_IS1	PF03811.13	gi|288560205|ref|YP_003423691.1|	-	0.0076	16.0	4.4	0.012	15.3	4.4	1.3	1	0	0	1	1	1	1	InsA	N-terminal	domain
TF_Zn_Ribbon	PF08271.12	gi|288560205|ref|YP_003423691.1|	-	0.01	15.3	4.8	0.036	13.6	4.8	1.9	1	1	0	1	1	1	0	TFIIB	zinc-binding
Rubredoxin_2	PF18073.1	gi|288560205|ref|YP_003423691.1|	-	0.011	15.4	3.2	0.38	10.5	0.3	2.3	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
OrfB_Zn_ribbon	PF07282.11	gi|288560205|ref|YP_003423691.1|	-	0.012	15.5	0.8	0.02	14.8	0.8	1.3	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
IBR	PF01485.21	gi|288560205|ref|YP_003423691.1|	-	0.014	15.6	0.4	0.022	15.0	0.4	1.3	1	0	0	1	1	1	0	IBR	domain,	a	half	RING-finger	domain
HTH_23	PF13384.6	gi|288560205|ref|YP_003423691.1|	-	0.015	15.1	0.0	0.042	13.7	0.0	1.7	2	0	0	2	2	2	0	Homeodomain-like	domain
zinc_ribbon_6	PF14599.6	gi|288560205|ref|YP_003423691.1|	-	0.017	15.1	1.6	0.75	9.9	0.3	2.3	2	0	0	2	2	2	0	Zinc-ribbon
ADK_lid	PF05191.14	gi|288560205|ref|YP_003423691.1|	-	0.032	14.2	4.6	0.27	11.3	0.2	3.0	2	1	0	2	2	2	0	Adenylate	kinase,	active	site	lid
GFA	PF04828.14	gi|288560205|ref|YP_003423691.1|	-	0.041	14.2	0.2	0.067	13.5	0.2	1.4	1	0	0	1	1	1	0	Glutathione-dependent	formaldehyde-activating	enzyme
zf-C2H2_3rep	PF18868.1	gi|288560205|ref|YP_003423691.1|	-	0.043	14.5	0.3	0.069	13.8	0.3	1.3	1	0	0	1	1	1	0	Zinc	finger	C2H2-type,	3	repeats
Nudix_N_2	PF14803.6	gi|288560205|ref|YP_003423691.1|	-	0.052	13.5	3.2	0.11	12.4	3.2	1.5	1	0	0	1	1	1	0	Nudix	N-terminal
TFIIS_C	PF01096.18	gi|288560205|ref|YP_003423691.1|	-	0.06	13.2	4.2	1.3	8.9	4.2	2.3	1	1	0	1	1	1	0	Transcription	factor	S-II	(TFIIS)
HTH_5	PF01022.20	gi|288560205|ref|YP_003423691.1|	-	0.071	13.0	0.0	0.12	12.3	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
Lar_restr_allev	PF14354.6	gi|288560205|ref|YP_003423691.1|	-	0.085	13.2	0.9	0.14	12.6	0.9	1.4	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
zf-ribbon_3	PF13248.6	gi|288560205|ref|YP_003423691.1|	-	0.096	12.1	3.2	1.4	8.4	0.7	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
eIF-5_eIF-2B	PF01873.17	gi|288560205|ref|YP_003423691.1|	-	0.099	12.5	1.0	0.2	11.6	0.5	1.7	2	0	0	2	2	2	0	Domain	found	in	IF2B/IF5
MarR_2	PF12802.7	gi|288560205|ref|YP_003423691.1|	-	0.2	11.6	0.0	0.31	11.0	0.0	1.2	1	0	0	1	1	1	0	MarR	family
Zn_ribbon_SprT	PF17283.2	gi|288560205|ref|YP_003423691.1|	-	0.22	11.4	4.8	4.1	7.4	0.2	2.3	1	1	1	2	2	2	0	SprT-like	zinc	ribbon	domain
zf_UBZ	PF18439.1	gi|288560205|ref|YP_003423691.1|	-	0.3	10.7	2.4	3.1	7.5	0.1	2.4	2	0	0	2	2	2	0	Ubiquitin-Binding	Zinc	Finger
zinc_ribbon_4	PF13717.6	gi|288560205|ref|YP_003423691.1|	-	0.46	10.4	3.2	0.7	9.9	1.8	2.1	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF3797	PF12677.7	gi|288560205|ref|YP_003423691.1|	-	4.5	7.2	7.8	19	5.2	7.8	2.1	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF3797)
NMT1_2	PF13379.6	gi|288560206|ref|YP_003423692.1|	-	5.5e-43	147.5	0.3	7e-43	147.1	0.3	1.1	1	0	0	1	1	1	1	NMT1-like	family
NMT1	PF09084.11	gi|288560206|ref|YP_003423692.1|	-	6.4e-34	117.8	0.6	8.9e-34	117.3	0.6	1.1	1	0	0	1	1	1	1	NMT1/THI5	like
OpuAC	PF04069.12	gi|288560206|ref|YP_003423692.1|	-	2.9e-16	59.8	0.0	4.1e-16	59.3	0.0	1.2	1	0	0	1	1	1	1	Substrate	binding	domain	of	ABC-type	glycine	betaine	transport	system
Phosphonate-bd	PF12974.7	gi|288560206|ref|YP_003423692.1|	-	2.7e-13	50.1	0.3	3.7e-13	49.6	0.3	1.2	1	0	0	1	1	1	1	ABC	transporter,	phosphonate,	periplasmic	substrate-binding	protein
SBP_bac_3	PF00497.20	gi|288560206|ref|YP_003423692.1|	-	2.7e-12	46.6	0.1	8e-12	45.1	0.1	1.7	1	1	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	3
Lipoprotein_9	PF03180.14	gi|288560206|ref|YP_003423692.1|	-	4e-10	39.2	0.0	4.5e-08	32.5	0.0	2.1	1	1	1	2	2	2	2	NLPA	lipoprotein
NMT1_3	PF16868.5	gi|288560206|ref|YP_003423692.1|	-	3.8e-07	29.8	1.6	4.8e-07	29.5	0.5	1.8	2	0	0	2	2	2	1	NMT1-like	family
YhfZ_C	PF14503.6	gi|288560206|ref|YP_003423692.1|	-	0.034	13.7	0.0	0.075	12.6	0.0	1.5	1	0	0	1	1	1	0	YhfZ	C-terminal	domain
Phyto-Amp	PF15438.6	gi|288560206|ref|YP_003423692.1|	-	0.048	13.5	3.4	0.94	9.3	0.1	2.3	2	0	0	2	2	2	0	Antigenic	membrane	protein	of	phytoplasma
SBP_bac_5	PF00496.22	gi|288560206|ref|YP_003423692.1|	-	0.13	11.2	0.4	0.9	8.4	0.0	2.3	3	0	0	3	3	3	0	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
BPD_transp_1	PF00528.22	gi|288560207|ref|YP_003423693.1|	-	5.8e-22	78.3	13.7	5.8e-22	78.3	13.7	2.1	2	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
SecE	PF00584.20	gi|288560207|ref|YP_003423693.1|	-	0.047	13.6	0.2	0.047	13.6	0.2	3.0	3	0	0	3	3	3	0	SecE/Sec61-gamma	subunits	of	protein	translocation	complex
Rax2	PF12768.7	gi|288560207|ref|YP_003423693.1|	-	1.9	7.9	4.8	14	5.1	0.3	2.5	3	0	0	3	3	3	0	Cortical	protein	marker	for	cell	polarity
ABC_tran	PF00005.27	gi|288560208|ref|YP_003423694.1|	-	7.7e-30	104.2	0.0	1.1e-29	103.7	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|288560208|ref|YP_003423694.1|	-	1e-05	25.5	0.1	0.072	12.9	0.1	2.2	1	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_16	PF13191.6	gi|288560208|ref|YP_003423694.1|	-	0.0004	20.8	0.0	0.00065	20.1	0.0	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_33	PF13671.6	gi|288560208|ref|YP_003423694.1|	-	0.00066	19.8	0.0	0.0017	18.5	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|288560208|ref|YP_003423694.1|	-	0.00085	19.6	0.0	0.0016	18.8	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
RsgA_GTPase	PF03193.16	gi|288560208|ref|YP_003423694.1|	-	0.001	19.0	0.0	0.0026	17.7	0.0	1.6	1	0	0	1	1	1	1	RsgA	GTPase
ABC_ATPase	PF09818.9	gi|288560208|ref|YP_003423694.1|	-	0.0017	17.3	0.0	0.0046	15.8	0.0	1.7	2	0	0	2	2	2	1	Predicted	ATPase	of	the	ABC	class
AAA	PF00004.29	gi|288560208|ref|YP_003423694.1|	-	0.0017	18.7	0.4	0.013	15.9	0.3	2.1	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_23	PF13476.6	gi|288560208|ref|YP_003423694.1|	-	0.003	18.1	0.0	0.0062	17.1	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
ATPase_2	PF01637.18	gi|288560208|ref|YP_003423694.1|	-	0.01	15.7	0.0	0.19	11.6	0.0	2.1	2	0	0	2	2	2	0	ATPase	domain	predominantly	from	Archaea
Rad17	PF03215.15	gi|288560208|ref|YP_003423694.1|	-	0.018	15.0	0.0	0.032	14.2	0.0	1.4	1	0	0	1	1	1	0	Rad17	P-loop	domain
AAA_28	PF13521.6	gi|288560208|ref|YP_003423694.1|	-	0.018	15.3	0.4	0.061	13.6	0.4	2.1	1	1	0	1	1	1	0	AAA	domain
NACHT	PF05729.12	gi|288560208|ref|YP_003423694.1|	-	0.022	14.7	0.6	0.046	13.6	0.3	1.6	2	0	0	2	2	2	0	NACHT	domain
IstB_IS21	PF01695.17	gi|288560208|ref|YP_003423694.1|	-	0.035	13.8	0.0	0.066	12.9	0.0	1.4	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
PduV-EutP	PF10662.9	gi|288560208|ref|YP_003423694.1|	-	0.039	13.7	0.0	0.32	10.7	0.1	2.1	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_25	PF13481.6	gi|288560208|ref|YP_003423694.1|	-	0.042	13.4	0.0	0.098	12.2	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_29	PF13555.6	gi|288560208|ref|YP_003423694.1|	-	0.044	13.5	0.0	0.12	12.1	0.0	1.7	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AP-5_subunit_s1	PF15001.6	gi|288560208|ref|YP_003423694.1|	-	0.06	13.3	0.0	0.11	12.5	0.0	1.4	1	1	0	1	1	1	0	AP-5	complex	subunit	sigma-1
AAA_18	PF13238.6	gi|288560208|ref|YP_003423694.1|	-	0.083	13.4	0.0	0.18	12.3	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_15	PF13175.6	gi|288560208|ref|YP_003423694.1|	-	0.12	12.1	0.0	0.17	11.6	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_5	PF07728.14	gi|288560208|ref|YP_003423694.1|	-	0.12	12.3	1.3	0.24	11.4	0.6	1.8	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
AAA_24	PF13479.6	gi|288560208|ref|YP_003423694.1|	-	0.14	11.9	0.0	0.24	11.1	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.22	gi|288560208|ref|YP_003423694.1|	-	0.16	12.4	0.0	0.4	11.1	0.0	1.7	1	0	0	1	1	1	0	RNA	helicase
AAA_14	PF13173.6	gi|288560208|ref|YP_003423694.1|	-	0.17	11.9	0.0	1.2	9.2	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
TsaE	PF02367.17	gi|288560208|ref|YP_003423694.1|	-	0.18	11.8	0.1	0.32	11.0	0.1	1.3	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
Phos_pyr_kin	PF08543.12	gi|288560209|ref|YP_003423695.1|	-	7.4e-72	241.7	1.5	1.1e-71	241.1	1.5	1.2	1	1	0	1	1	1	1	Phosphomethylpyrimidine	kinase
PfkB	PF00294.24	gi|288560209|ref|YP_003423695.1|	-	5.5e-05	22.6	0.0	6.9e-05	22.3	0.0	1.2	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Carb_kinase	PF01256.17	gi|288560209|ref|YP_003423695.1|	-	0.0062	16.0	0.4	0.0084	15.6	0.4	1.3	1	1	0	1	1	1	1	Carbohydrate	kinase
CofC	PF01983.16	gi|288560210|ref|YP_003423696.1|	-	2.9e-73	245.6	3.9	7e-73	244.4	3.9	1.5	1	1	0	1	1	1	1	Guanylyl	transferase	CofC	like
NTP_transf_3	PF12804.7	gi|288560210|ref|YP_003423696.1|	-	4.4e-08	33.6	0.0	1.6e-07	31.8	0.0	1.7	1	1	0	2	2	2	1	MobA-like	NTP	transferase	domain
DUF2064	PF09837.9	gi|288560210|ref|YP_003423696.1|	-	0.00013	21.8	0.0	0.0003	20.6	0.0	1.7	1	1	1	2	2	2	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2064)
DUF1368	PF07112.11	gi|288560210|ref|YP_003423696.1|	-	0.048	12.5	0.3	0.13	11.1	0.3	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1368)
tRNA-synt_2b	PF00587.25	gi|288560211|ref|YP_003423697.1|	-	1.2e-27	97.1	0.1	2.7e-27	95.9	0.0	1.6	2	0	0	2	2	2	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
ProRS-C_1	PF09180.11	gi|288560211|ref|YP_003423697.1|	-	1.1e-16	60.8	1.6	2.6e-16	59.6	1.6	1.7	1	0	0	1	1	1	1	Prolyl-tRNA	synthetase,	C-terminal
HGTP_anticodon	PF03129.20	gi|288560211|ref|YP_003423697.1|	-	1.6e-16	60.2	0.0	4.7e-16	58.7	0.0	1.9	1	0	0	1	1	1	1	Anticodon	binding	domain
SL4P	PF17618.2	gi|288560211|ref|YP_003423697.1|	-	0.017	15.2	0.4	0.31	11.1	0.1	2.8	3	0	0	3	3	3	0	Uncharacterized	Strongylid	L4	protein
zinc_ribbon_2	PF13240.6	gi|288560211|ref|YP_003423697.1|	-	0.031	14.0	3.0	0.4	10.5	0.5	2.6	2	0	0	2	2	2	0	zinc-ribbon	domain
zf_CopZ	PF18423.1	gi|288560211|ref|YP_003423697.1|	-	0.076	13.0	0.7	4.2	7.4	0.1	2.5	2	0	0	2	2	2	0	Zinc	binding	domain
TIR_2	PF13676.6	gi|288560211|ref|YP_003423697.1|	-	0.11	13.1	0.0	0.46	11.1	0.0	2.1	1	1	0	1	1	1	0	TIR	domain
zf-ribbon_3	PF13248.6	gi|288560211|ref|YP_003423697.1|	-	0.2	11.1	1.8	0.22	11.0	0.3	1.8	2	0	0	2	2	2	0	zinc-ribbon	domain
Zn-ribbon_8	PF09723.10	gi|288560211|ref|YP_003423697.1|	-	0.22	11.7	0.7	0.55	10.4	0.7	1.6	1	0	0	1	1	1	0	Zinc	ribbon	domain
Fe-ADH_2	PF13685.6	gi|288560212|ref|YP_003423698.1|	-	1.1e-68	231.6	3.1	1.4e-68	231.3	3.1	1.1	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH	PF00465.19	gi|288560212|ref|YP_003423698.1|	-	3.9e-23	81.9	2.2	1.9e-21	76.3	2.2	2.1	1	1	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
DHQ_synthase	PF01761.20	gi|288560212|ref|YP_003423698.1|	-	4.7e-11	42.3	0.5	1.8e-10	40.4	0.5	1.9	1	1	0	1	1	1	1	3-dehydroquinate	synthase
UPF0179	PF03684.13	gi|288560213|ref|YP_003423699.1|	-	4.7e-44	149.7	6.7	5.3e-44	149.5	6.7	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0179)
RseC_MucC	PF04246.12	gi|288560213|ref|YP_003423699.1|	-	0.033	14.2	0.5	0.033	14.2	0.5	1.8	2	0	0	2	2	2	0	Positive	regulator	of	sigma(E),	RseC/MucC
MetallophosN	PF16371.5	gi|288560213|ref|YP_003423699.1|	-	0.084	13.1	0.1	0.17	12.2	0.1	1.5	1	0	0	1	1	1	0	N	terminal	of	Calcineurin-like	phosphoesterase
DDE_Tnp_1_6	PF13751.6	gi|288560213|ref|YP_003423699.1|	-	0.94	9.7	6.8	0.57	10.4	0.5	2.3	1	1	0	2	2	2	0	Transposase	DDE	domain
Rib_5-P_isom_A	PF06026.14	gi|288560214|ref|YP_003423700.1|	-	2.7e-67	225.7	0.1	3.3e-67	225.4	0.1	1.1	1	0	0	1	1	1	1	Ribose	5-phosphate	isomerase	A	(phosphoriboisomerase	A)
DeoRC	PF00455.22	gi|288560214|ref|YP_003423700.1|	-	6.6e-07	29.4	0.0	0.0005	20.1	0.0	2.2	1	1	1	2	2	2	2	DeoR	C	terminal	sensor	domain
DsrD	PF08679.11	gi|288560214|ref|YP_003423700.1|	-	0.093	13.0	0.0	0.16	12.2	0.0	1.4	1	0	0	1	1	1	0	Dissimilatory	sulfite	reductase	D	(DsrD)
Pyr_redox_2	PF07992.14	gi|288560215|ref|YP_003423701.1|	-	3.1e-62	210.5	2.2	4.2e-62	210.0	2.2	1.2	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|288560215|ref|YP_003423701.1|	-	8.3e-27	93.6	4.0	2.2e-19	69.8	0.0	3.5	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|288560215|ref|YP_003423701.1|	-	3e-18	66.1	0.8	9.5e-13	48.1	0.0	2.3	1	1	1	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.22	gi|288560215|ref|YP_003423701.1|	-	2.1e-15	56.9	0.1	5.3e-15	55.6	0.1	1.6	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
DAO	PF01266.24	gi|288560215|ref|YP_003423701.1|	-	2.8e-11	43.6	3.5	0.011	15.3	0.0	4.1	4	0	0	4	4	4	4	FAD	dependent	oxidoreductase
HI0933_like	PF03486.14	gi|288560215|ref|YP_003423701.1|	-	2.8e-08	32.9	2.3	0.051	12.3	0.0	4.0	3	1	1	4	4	4	3	HI0933-like	protein
Trp_halogenase	PF04820.14	gi|288560215|ref|YP_003423701.1|	-	4.1e-08	32.5	0.4	0.00013	20.9	0.0	2.3	2	0	0	2	2	2	2	Tryptophan	halogenase
GIDA	PF01134.22	gi|288560215|ref|YP_003423701.1|	-	4.2e-08	32.7	6.2	0.043	12.9	0.1	4.1	2	2	2	4	4	4	3	Glucose	inhibited	division	protein	A
NAD_binding_8	PF13450.6	gi|288560215|ref|YP_003423701.1|	-	1.5e-06	28.3	0.0	0.013	15.7	0.0	2.5	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
NAD_binding_9	PF13454.6	gi|288560215|ref|YP_003423701.1|	-	2.5e-06	27.6	0.3	0.53	10.3	0.0	3.4	3	0	0	3	3	3	2	FAD-NAD(P)-binding
FAD_binding_2	PF00890.24	gi|288560215|ref|YP_003423701.1|	-	0.00019	20.7	7.0	0.6	9.1	0.5	4.8	2	2	3	5	5	5	2	FAD	binding	domain
K_oxygenase	PF13434.6	gi|288560215|ref|YP_003423701.1|	-	0.00019	20.7	0.2	0.049	12.8	0.0	3.0	2	1	0	3	3	3	1	L-lysine	6-monooxygenase	(NADPH-requiring)
FAD_oxidored	PF12831.7	gi|288560215|ref|YP_003423701.1|	-	0.00022	20.7	6.2	0.16	11.3	0.0	3.9	3	1	1	4	4	4	2	FAD	dependent	oxidoreductase
NAD_binding_7	PF13241.6	gi|288560215|ref|YP_003423701.1|	-	0.00047	20.6	0.6	1.1	9.8	0.0	2.9	3	0	0	3	3	2	2	Putative	NAD(P)-binding
Thi4	PF01946.17	gi|288560215|ref|YP_003423701.1|	-	0.0025	17.1	0.2	0.45	9.7	0.0	2.5	2	0	0	2	2	2	1	Thi4	family
3HCDH_N	PF02737.18	gi|288560215|ref|YP_003423701.1|	-	0.0035	17.3	1.9	0.027	14.4	0.0	2.9	2	1	1	3	3	3	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
AlaDh_PNT_C	PF01262.21	gi|288560215|ref|YP_003423701.1|	-	0.0063	15.8	0.5	1.3	8.2	0.1	2.7	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
adh_short	PF00106.25	gi|288560215|ref|YP_003423701.1|	-	0.015	14.8	2.6	0.72	9.3	0.1	2.9	3	0	0	3	3	3	0	short	chain	dehydrogenase
PK_C	PF02887.16	gi|288560215|ref|YP_003423701.1|	-	0.021	15.1	0.1	0.092	13.0	0.0	2.1	2	0	0	2	2	2	0	Pyruvate	kinase,	alpha/beta	domain
UPF0052	PF01933.18	gi|288560215|ref|YP_003423701.1|	-	0.046	12.9	0.3	0.23	10.7	0.1	2.1	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0052
Lycopene_cycl	PF05834.12	gi|288560215|ref|YP_003423701.1|	-	0.048	12.7	1.2	5.3	6.0	0.1	3.0	3	0	0	3	3	3	0	Lycopene	cyclase	protein
FAD_binding_3	PF01494.19	gi|288560215|ref|YP_003423701.1|	-	0.048	12.9	0.1	0.47	9.6	0.1	2.4	3	0	0	3	3	3	0	FAD	binding	domain
TrkA_N	PF02254.18	gi|288560215|ref|YP_003423701.1|	-	0.3	11.4	1.9	7.1	6.9	0.1	3.3	3	0	0	3	3	3	0	TrkA-N	domain
tRNA-synt_1g	PF09334.11	gi|288560216|ref|YP_003423702.1|	-	5.5e-160	532.4	0.0	7.4e-160	532.0	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(M)
tRNA_bind	PF01588.20	gi|288560216|ref|YP_003423702.1|	-	6.2e-23	80.7	0.4	1.4e-22	79.6	0.2	1.7	2	0	0	2	2	1	1	Putative	tRNA	binding	domain
tRNA-synt_1	PF00133.22	gi|288560216|ref|YP_003423702.1|	-	7.2e-18	64.2	8.5	2.3e-07	29.5	0.0	4.3	4	1	0	4	4	3	3	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1e	PF01406.19	gi|288560216|ref|YP_003423702.1|	-	9e-09	35.1	6.1	0.0013	18.1	0.0	3.3	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(C)	catalytic	domain
Anticodon_1	PF08264.13	gi|288560216|ref|YP_003423702.1|	-	0.0023	17.9	2.6	0.0034	17.4	1.8	1.7	1	1	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
DZR	PF12773.7	gi|288560216|ref|YP_003423702.1|	-	0.0035	17.3	6.2	0.013	15.5	6.3	2.0	1	1	0	1	1	1	1	Double	zinc	ribbon
CDC45	PF02724.14	gi|288560216|ref|YP_003423702.1|	-	0.02	13.2	5.6	0.028	12.7	5.6	1.1	1	0	0	1	1	1	0	CDC45-like	protein
EIIBC-GUT_N	PF03612.14	gi|288560216|ref|YP_003423702.1|	-	0.21	11.3	2.7	1.9	8.2	3.2	2.0	2	0	0	2	2	2	0	Sorbitol	phosphotransferase	enzyme	II	N-terminus
HypA	PF01155.19	gi|288560216|ref|YP_003423702.1|	-	0.37	10.8	7.6	2.3	8.3	0.3	2.9	2	1	1	3	3	3	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Laminin_EGF	PF00053.24	gi|288560216|ref|YP_003423702.1|	-	0.43	10.8	5.4	0.98	9.6	5.4	1.6	1	0	0	1	1	1	0	Laminin	EGF	domain
RNA_pol_Rpc4	PF05132.14	gi|288560216|ref|YP_003423702.1|	-	0.46	10.9	3.2	0.81	10.1	3.2	1.3	1	0	0	1	1	1	0	RNA	polymerase	III	RPC4
zinc-ribbons_6	PF07191.12	gi|288560216|ref|YP_003423702.1|	-	0.71	9.9	6.4	5.2	7.1	4.0	2.3	1	1	1	2	2	2	0	zinc-ribbons
Zn-ribbon_8	PF09723.10	gi|288560216|ref|YP_003423702.1|	-	1	9.5	7.4	8.7	6.6	1.5	2.7	2	0	0	2	2	2	0	Zinc	ribbon	domain
TMEM214	PF10151.9	gi|288560216|ref|YP_003423702.1|	-	1.2	7.5	9.4	2.2	6.7	9.4	1.3	1	0	0	1	1	1	0	TMEM214,	C-terminal,	caspase	4	activator
Vfa1	PF08432.10	gi|288560216|ref|YP_003423702.1|	-	2.3	8.5	14.6	5.3	7.3	14.6	1.6	1	0	0	1	1	1	0	AAA-ATPase	Vps4-associated	protein	1
DUF530	PF04409.12	gi|288560217|ref|YP_003423703.1|	-	1.1e-230	766.5	25.5	1.2e-230	766.3	25.5	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF530)
OST_P2	PF18235.1	gi|288560217|ref|YP_003423703.1|	-	0.0052	16.7	2.8	0.048	13.6	0.0	2.7	3	0	0	3	3	3	1	Oligosaccharyltransferase	Peripheral	2	domain
HypA	PF01155.19	gi|288560217|ref|YP_003423703.1|	-	0.01	15.8	0.4	0.054	13.5	0.2	2.1	2	0	0	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zinc_ribbon_6	PF14599.6	gi|288560217|ref|YP_003423703.1|	-	0.014	15.4	0.7	0.037	14.1	0.7	1.7	1	0	0	1	1	1	0	Zinc-ribbon
GP17	PF17420.2	gi|288560217|ref|YP_003423703.1|	-	1.1	9.4	9.6	0.044	14.0	1.8	2.6	3	0	0	3	3	3	0	Superinfection	exclusion	gene	product	17
HTH_23	PF13384.6	gi|288560218|ref|YP_003423704.1|	-	1.4e-06	27.9	0.0	0.00015	21.4	0.0	2.4	2	0	0	2	2	2	1	Homeodomain-like	domain
Sigma70_r4_2	PF08281.12	gi|288560218|ref|YP_003423704.1|	-	4.4e-06	26.3	0.0	0.039	13.6	0.0	2.6	3	0	0	3	3	3	2	Sigma-70,	region	4
GerE	PF00196.19	gi|288560218|ref|YP_003423704.1|	-	6.4e-05	22.4	0.1	0.012	15.1	0.1	2.4	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	luxR	family
HTH_7	PF02796.15	gi|288560218|ref|YP_003423704.1|	-	0.0014	18.7	0.7	0.42	10.7	0.0	2.4	2	0	0	2	2	2	2	Helix-turn-helix	domain	of	resolvase
DUF1699	PF08004.11	gi|288560218|ref|YP_003423704.1|	-	0.0023	17.6	2.8	0.025	14.2	0.3	2.3	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF1699)
Terminase_5	PF06056.12	gi|288560218|ref|YP_003423704.1|	-	0.0077	16.1	0.9	1.6	8.7	0.0	3.5	1	1	3	4	4	4	1	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_24	PF13412.6	gi|288560218|ref|YP_003423704.1|	-	0.0086	15.6	0.0	0.66	9.6	0.0	2.6	2	1	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
DUF742	PF05331.11	gi|288560218|ref|YP_003423704.1|	-	0.016	15.0	0.0	0.03	14.1	0.0	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF742)
TrmB	PF01978.19	gi|288560218|ref|YP_003423704.1|	-	0.034	14.0	0.1	0.6	10.0	0.0	2.4	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.10	gi|288560218|ref|YP_003423704.1|	-	0.042	13.7	0.0	9.3	6.1	0.0	2.2	2	0	0	2	2	2	0	IclR	helix-turn-helix	domain
CENP-B_N	PF04218.13	gi|288560218|ref|YP_003423704.1|	-	0.051	13.2	0.1	9.8	5.9	0.0	2.5	2	0	0	2	2	2	0	CENP-B	N-terminal	DNA-binding	domain
MALT1_Ig	PF18703.1	gi|288560218|ref|YP_003423704.1|	-	0.063	13.3	0.1	0.18	11.8	0.1	1.7	1	1	0	1	1	1	0	MALT1	Ig-like	domain
PAX	PF00292.18	gi|288560218|ref|YP_003423704.1|	-	0.11	12.5	0.0	4.5	7.2	0.0	2.2	1	1	1	2	2	2	0	'Paired	box'	domain
Big_3_5	PF16640.5	gi|288560219|ref|YP_003423705.1|	-	1.1e-228	740.2	291.5	4.2e-15	55.7	6.3	29.5	27	1	1	28	28	28	26	Bacterial	Ig-like	domain	(group	3)
Beta_helix	PF13229.6	gi|288560219|ref|YP_003423705.1|	-	6e-11	42.4	159.2	1.2e-08	34.9	29.1	25.0	7	3	18	27	27	27	11	Right	handed	beta	helix	region
DUF3244	PF11589.8	gi|288560219|ref|YP_003423705.1|	-	0.0028	17.7	1.3	0.0028	17.7	1.3	20.3	21	2	0	21	21	21	8	Domain	of	unknown	function	(DUF3244)
RRM_occluded	PF16842.5	gi|288560219|ref|YP_003423705.1|	-	0.038	13.9	0.4	7.1	6.6	0.1	3.4	2	0	0	2	2	2	0	Occluded	RNA-recognition	motif
Big_3_5	PF16640.5	gi|288560220|ref|YP_003423706.1|	-	0	1200.5	375.4	7.7e-19	67.7	4.1	29.1	29	0	0	29	29	29	29	Bacterial	Ig-like	domain	(group	3)
DUF3244	PF11589.8	gi|288560220|ref|YP_003423706.1|	-	1.1e-47	160.3	178.2	0.0018	18.3	0.8	27.0	24	4	4	28	28	28	18	Domain	of	unknown	function	(DUF3244)
Cupredoxin_1	PF13473.6	gi|288560220|ref|YP_003423706.1|	-	1.4e-14	54.0	78.1	0.22	11.6	0.1	22.6	17	6	6	23	23	23	4	Cupredoxin-like	domain
Gmad2	PF10648.9	gi|288560220|ref|YP_003423706.1|	-	2.4e-11	43.7	17.0	0.32	11.3	0.1	10.2	9	0	0	9	9	7	4	Immunoglobulin-like	domain	of	bacterial	spore	germination
MOSC_N	PF03476.16	gi|288560220|ref|YP_003423706.1|	-	2.3e-05	24.3	0.0	3.5	7.5	0.0	6.9	6	0	0	6	6	6	1	MOSC	N-terminal	beta	barrel	domain
FlgD_ig	PF13860.6	gi|288560220|ref|YP_003423706.1|	-	2.9e-05	23.8	173.4	0.0097	15.8	2.1	27.0	24	5	3	27	27	27	8	FlgD	Ig-like	domain
MliC	PF09864.9	gi|288560220|ref|YP_003423706.1|	-	6.4e-05	22.8	30.6	7.2	6.6	0.0	15.7	16	0	0	16	16	16	1	Membrane-bound	lysozyme-inhibitor	of	c-type	lysozyme
DUF2141	PF09912.9	gi|288560220|ref|YP_003423706.1|	-	0.002	18.0	112.8	0.058	13.3	0.4	23.3	25	0	0	25	25	25	4	Uncharacterized	protein	conserved	in	bacteria	(DUF2141)
TcfC	PF16967.5	gi|288560220|ref|YP_003423706.1|	-	0.0066	15.9	37.9	12	5.5	0.0	14.3	15	2	1	16	16	15	0	E-set	like	domain
CarboxypepD_reg	PF13620.6	gi|288560220|ref|YP_003423706.1|	-	0.0087	16.3	206.9	0.05	13.9	3.6	31.5	10	8	17	29	29	29	8	Carboxypeptidase	regulatory-like	domain
KH_10	PF17905.1	gi|288560220|ref|YP_003423706.1|	-	0.034	14.6	12.0	26	5.3	0.1	7.4	8	0	0	8	8	6	0	GLD-3	KH	domain	5
Ig_2	PF13895.6	gi|288560220|ref|YP_003423706.1|	-	0.05	14.0	9.6	1.5	9.2	0.2	4.6	4	0	0	4	4	2	0	Immunoglobulin	domain
ATP-sulfurylase	PF01747.17	gi|288560220|ref|YP_003423706.1|	-	0.052	13.0	0.0	21	4.5	0.0	3.2	2	0	0	2	2	2	0	ATP-sulfurylase
PS-DH	PF14765.6	gi|288560220|ref|YP_003423706.1|	-	0.081	12.2	8.6	12	5.0	0.0	6.9	9	0	0	9	9	9	0	Polyketide	synthase	dehydratase
Terminase_6C	PF17289.2	gi|288560220|ref|YP_003423706.1|	-	0.084	13.0	3.1	20	5.2	0.1	3.6	3	0	0	3	3	3	0	Terminase	RNaseH-like	domain
CE2_N	PF17996.1	gi|288560220|ref|YP_003423706.1|	-	0.09	12.8	40.7	1.8	8.6	0.2	11.5	11	1	2	13	13	11	0	Carbohydrate	esterase	2	N-terminal
Methyltranf_PUA	PF13636.6	gi|288560220|ref|YP_003423706.1|	-	0.22	11.5	1.9	45	4.1	0.0	5.8	6	0	0	6	6	5	0	RNA-binding	PUA-like	domain	of	methyltransferase	RsmF
DBB	PF14545.6	gi|288560220|ref|YP_003423706.1|	-	0.27	11.2	61.9	5	7.0	0.5	16.2	18	2	1	19	19	16	0	Dof,	BCAP,	and	BANK	(DBB)	motif,
Inhibitor_I42	PF09394.10	gi|288560220|ref|YP_003423706.1|	-	3.9	8.0	28.2	3	8.3	0.4	10.6	10	1	0	10	10	9	0	Chagasin	family	peptidase	inhibitor	I42
TIG	PF01833.24	gi|288560220|ref|YP_003423706.1|	-	4.4	7.5	208.6	0.017	15.2	1.4	29.2	18	9	11	30	30	29	0	IPT/TIG	domain
Glycos_transf_4	PF00953.21	gi|288560221|ref|YP_003423707.1|	-	6.2e-28	97.8	20.2	6.2e-28	97.8	20.2	2.7	3	2	0	3	3	3	1	Glycosyl	transferase	family	4
DUF3278	PF11683.8	gi|288560221|ref|YP_003423707.1|	-	0.18	11.9	3.7	1.6	8.8	0.1	3.2	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3278)
DUF2755	PF10954.8	gi|288560221|ref|YP_003423707.1|	-	4.7	7.2	13.6	1.1	9.3	2.7	3.5	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF2755)
Class_IIIsignal	PF04021.12	gi|288560224|ref|YP_003423710.1|	-	0.022	14.7	2.0	0.048	13.6	2.0	1.6	1	1	0	1	1	1	0	Class	III	signal	peptide
AvrPtoB-E3_ubiq	PF09046.10	gi|288560224|ref|YP_003423710.1|	-	0.1	12.9	0.0	0.18	12.1	0.0	1.4	1	0	0	1	1	1	0	AvrPtoB	E3	ubiquitin	ligase
DNA_primase_lrg	PF04104.14	gi|288560226|ref|YP_003423712.1|	-	5.7e-19	68.6	0.0	6.2e-18	65.1	0.0	2.4	1	1	0	1	1	1	1	Eukaryotic	and	archaeal	DNA	primase,	large	subunit
Big_1	PF02369.16	gi|288560227|ref|YP_003423713.1|	-	2.6e-07	30.5	21.0	0.0029	17.6	4.1	5.3	5	0	0	5	5	5	2	Bacterial	Ig-like	domain	(group	1)
Big_3_5	PF16640.5	gi|288560227|ref|YP_003423713.1|	-	2.1e-06	27.8	9.0	0.00081	19.5	0.0	4.3	3	1	1	4	4	4	2	Bacterial	Ig-like	domain	(group	3)
Mucin_bdg	PF03272.13	gi|288560227|ref|YP_003423713.1|	-	0.59	10.2	14.8	2	8.5	2.2	4.0	3	0	0	3	3	3	0	Putative	mucin	or	carbohydrate-binding	module
DUF3537	PF12056.8	gi|288560227|ref|YP_003423713.1|	-	0.66	8.7	4.6	1.5	7.6	4.6	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3537)
Lebercilin	PF15619.6	gi|288560228|ref|YP_003423714.1|	-	4.8e-05	23.1	10.5	5.7e-05	22.9	10.5	1.0	1	0	0	1	1	1	1	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
OmpH	PF03938.14	gi|288560228|ref|YP_003423714.1|	-	7.8e-05	23.0	15.6	8.9e-05	22.9	15.6	1.1	1	0	0	1	1	1	1	Outer	membrane	protein	(OmpH-like)
DUF3552	PF12072.8	gi|288560228|ref|YP_003423714.1|	-	0.00014	21.4	14.6	0.00016	21.2	14.6	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3552)
DUF16	PF01519.16	gi|288560228|ref|YP_003423714.1|	-	0.00037	21.0	8.7	0.00046	20.6	8.7	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF16
HrpB7	PF09486.10	gi|288560228|ref|YP_003423714.1|	-	0.00091	19.6	10.0	0.0011	19.3	10.0	1.1	1	0	0	1	1	1	1	Bacterial	type	III	secretion	protein	(HrpB7)
DUF4200	PF13863.6	gi|288560228|ref|YP_003423714.1|	-	0.00093	19.6	16.4	0.00093	19.6	16.4	1.7	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4200)
Fmp27_WPPW	PF10359.9	gi|288560228|ref|YP_003423714.1|	-	0.0021	17.0	10.5	0.0024	16.8	10.5	1.0	1	0	0	1	1	1	1	RNA	pol	II	promoter	Fmp27	protein	domain
Atg14	PF10186.9	gi|288560228|ref|YP_003423714.1|	-	0.0027	16.8	10.3	0.0031	16.7	10.3	1.0	1	0	0	1	1	1	1	Vacuolar	sorting	38	and	autophagy-related	subunit	14
Fib_alpha	PF08702.10	gi|288560228|ref|YP_003423714.1|	-	0.0042	17.3	8.1	0.0042	17.3	8.1	1.9	1	1	1	2	2	2	1	Fibrinogen	alpha/beta	chain	family
Tropomyosin_1	PF12718.7	gi|288560228|ref|YP_003423714.1|	-	0.0045	17.1	15.6	0.0058	16.8	15.6	1.3	1	0	0	1	1	1	1	Tropomyosin	like
Spectrin	PF00435.21	gi|288560228|ref|YP_003423714.1|	-	0.0048	17.4	12.6	0.027	14.9	5.9	2.0	1	1	1	2	2	2	2	Spectrin	repeat
Fez1	PF06818.15	gi|288560228|ref|YP_003423714.1|	-	0.0055	17.2	9.9	0.0065	16.9	9.9	1.1	1	0	0	1	1	1	1	Fez1
DUF1664	PF07889.12	gi|288560228|ref|YP_003423714.1|	-	0.0061	16.6	6.2	0.0068	16.4	6.2	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1664)
AAA_13	PF13166.6	gi|288560228|ref|YP_003423714.1|	-	0.0074	15.0	12.9	0.0083	14.8	12.9	1.0	1	0	0	1	1	1	1	AAA	domain
DUF812	PF05667.11	gi|288560228|ref|YP_003423714.1|	-	0.0095	14.9	12.9	0.01	14.7	12.9	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF812)
Cluap1	PF10234.9	gi|288560228|ref|YP_003423714.1|	-	0.01	15.3	10.6	0.011	15.1	10.6	1.1	1	0	0	1	1	1	0	Clusterin-associated	protein-1
DUF2009	PF09418.10	gi|288560228|ref|YP_003423714.1|	-	0.012	14.7	9.1	0.014	14.5	9.1	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2009)
Prefoldin_2	PF01920.20	gi|288560228|ref|YP_003423714.1|	-	0.019	14.9	7.3	0.019	14.9	7.3	2.2	1	1	1	2	2	2	0	Prefoldin	subunit
LETM1	PF07766.13	gi|288560228|ref|YP_003423714.1|	-	0.02	14.2	5.7	0.023	14.1	5.7	1.1	1	0	0	1	1	1	0	LETM1-like	protein
Spc7	PF08317.11	gi|288560228|ref|YP_003423714.1|	-	0.022	13.6	12.9	0.024	13.5	12.9	1.1	1	0	0	1	1	1	0	Spc7	kinetochore	protein
HemX	PF04375.14	gi|288560228|ref|YP_003423714.1|	-	0.024	13.9	4.4	0.027	13.8	4.4	1.1	1	0	0	1	1	1	0	HemX,	putative	uroporphyrinogen-III	C-methyltransferase
Noelin-1	PF12308.8	gi|288560228|ref|YP_003423714.1|	-	0.026	14.5	2.2	0.031	14.2	2.2	1.2	1	0	0	1	1	1	0	Neurogenesis	glycoprotein
DUF3837	PF12939.7	gi|288560228|ref|YP_003423714.1|	-	0.033	14.6	5.8	0.033	14.6	5.8	1.8	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3837)
ATG16	PF08614.11	gi|288560228|ref|YP_003423714.1|	-	0.036	14.3	8.9	0.047	13.9	8.9	1.2	1	0	0	1	1	1	0	Autophagy	protein	16	(ATG16)
ISG65-75	PF11727.8	gi|288560228|ref|YP_003423714.1|	-	0.066	12.4	12.2	0.074	12.3	12.2	1.0	1	0	0	1	1	1	0	Invariant	surface	glycoprotein
UPF0242	PF06785.11	gi|288560228|ref|YP_003423714.1|	-	0.072	13.2	12.0	0.081	13.0	12.0	1.1	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0242)	N-terminus
Exonuc_VII_L	PF02601.15	gi|288560228|ref|YP_003423714.1|	-	0.085	12.4	4.2	0.092	12.3	4.2	1.0	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
DUF2203	PF09969.9	gi|288560228|ref|YP_003423714.1|	-	0.13	13.0	6.5	0.16	12.7	6.5	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2203)
DUF4407	PF14362.6	gi|288560228|ref|YP_003423714.1|	-	0.13	11.6	7.8	0.15	11.4	7.8	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
Csm1_N	PF18504.1	gi|288560228|ref|YP_003423714.1|	-	0.16	12.3	15.6	0.048	14.0	10.3	2.0	1	1	1	2	2	2	0	Csm1	N-terminal	domain
DUF724	PF05266.14	gi|288560228|ref|YP_003423714.1|	-	0.18	11.6	13.7	0.2	11.5	13.7	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF724)
Med9	PF07544.13	gi|288560228|ref|YP_003423714.1|	-	0.2	11.8	13.1	0.73	10.0	13.1	1.9	1	1	0	1	1	1	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
HAUS6_N	PF14661.6	gi|288560228|ref|YP_003423714.1|	-	0.21	11.2	9.2	0.26	10.8	9.2	1.1	1	0	0	1	1	1	0	HAUS	augmin-like	complex	subunit	6	N-terminus
NPV_P10	PF05531.12	gi|288560228|ref|YP_003423714.1|	-	0.3	11.6	6.6	0.63	10.5	6.6	1.8	1	1	0	1	1	1	0	Nucleopolyhedrovirus	P10	protein
CC2-LZ	PF16516.5	gi|288560228|ref|YP_003423714.1|	-	0.4	11.1	14.7	0.58	10.5	12.9	1.9	1	1	1	2	2	2	0	Leucine	zipper	of	domain	CC2	of	NEMO,	NF-kappa-B	essential	modulator
GvpL_GvpF	PF06386.11	gi|288560228|ref|YP_003423714.1|	-	0.46	10.4	4.6	0.46	10.4	4.6	1.1	1	0	0	1	1	1	0	Gas	vesicle	synthesis	protein	GvpL/GvpF
FAM76	PF16046.5	gi|288560228|ref|YP_003423714.1|	-	0.46	9.8	9.7	0.53	9.6	9.7	1.1	1	0	0	1	1	1	0	FAM76	protein
TMPIT	PF07851.13	gi|288560228|ref|YP_003423714.1|	-	0.47	9.6	10.1	0.48	9.6	10.1	1.0	1	0	0	1	1	1	0	TMPIT-like	protein
Mlf1IP	PF10248.9	gi|288560228|ref|YP_003423714.1|	-	0.52	10.3	7.0	0.31	11.0	5.4	1.4	1	1	0	1	1	1	0	Myelodysplasia-myeloid	leukemia	factor	1-interacting	protein
GPHR_N	PF12537.8	gi|288560228|ref|YP_003423714.1|	-	0.59	10.3	3.7	1.6	8.9	1.4	2.2	1	1	1	2	2	2	0	The	Golgi	pH	Regulator	(GPHR)	Family	N-terminal
DUF641	PF04859.12	gi|288560228|ref|YP_003423714.1|	-	0.67	10.3	11.9	1.6	9.1	11.9	1.7	1	1	0	1	1	1	0	Plant	protein	of	unknown	function	(DUF641)
SCFA_trans	PF02667.14	gi|288560228|ref|YP_003423714.1|	-	0.87	8.5	2.9	0.99	8.3	2.9	1.2	1	0	0	1	1	1	0	Short	chain	fatty	acid	transporter
AAA_23	PF13476.6	gi|288560228|ref|YP_003423714.1|	-	0.98	9.9	16.9	1.3	9.5	16.9	1.3	1	0	0	1	1	1	0	AAA	domain
FliD_N	PF02465.18	gi|288560228|ref|YP_003423714.1|	-	1.1	10.0	8.1	13	6.6	8.1	2.1	1	1	0	1	1	1	0	Flagellar	hook-associated	protein	2	N-terminus
Med4	PF10018.9	gi|288560228|ref|YP_003423714.1|	-	1.3	8.7	14.8	0.15	11.7	7.0	2.0	1	1	1	2	2	2	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
FemAB	PF02388.16	gi|288560228|ref|YP_003423714.1|	-	1.6	7.6	9.8	1.8	7.4	9.8	1.0	1	0	0	1	1	1	0	FemAB	family
V_ATPase_I	PF01496.19	gi|288560228|ref|YP_003423714.1|	-	1.8	6.4	9.5	2	6.3	9.5	1.0	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
Mgr1	PF08602.10	gi|288560228|ref|YP_003423714.1|	-	1.9	7.2	7.5	1.9	7.3	7.5	1.0	1	0	0	1	1	1	0	Mgr1-like,	i-AAA	protease	complex	subunit
DUF737	PF05300.11	gi|288560228|ref|YP_003423714.1|	-	2.3	8.5	13.7	2.5	8.4	13.7	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF737)
ABC_tran_CTD	PF16326.5	gi|288560228|ref|YP_003423714.1|	-	4.6	7.6	20.4	9.8	6.5	20.4	1.7	1	1	0	1	1	1	0	ABC	transporter	C-terminal	domain
PAD	PF03068.15	gi|288560228|ref|YP_003423714.1|	-	4.7	6.1	7.0	22	3.9	6.9	1.7	1	1	1	2	2	2	0	Protein-arginine	deiminase	(PAD)
Macoilin	PF09726.9	gi|288560228|ref|YP_003423714.1|	-	5.6	5.4	13.5	8.3	4.8	13.5	1.4	1	1	0	1	1	1	0	Macoilin	family
DUF4094	PF13334.6	gi|288560228|ref|YP_003423714.1|	-	5.9	7.4	8.0	9.9	6.7	7.1	1.9	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4094)
DUF3987	PF13148.6	gi|288560228|ref|YP_003423714.1|	-	6.3	5.7	10.1	6.9	5.6	10.1	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3987)
DUF4140	PF13600.6	gi|288560228|ref|YP_003423714.1|	-	8.4	6.9	11.6	37	4.8	11.6	1.9	1	1	0	1	1	1	0	N-terminal	domain	of	unknown	function	(DUF4140)
EMC3_TMCO1	PF01956.16	gi|288560228|ref|YP_003423714.1|	-	8.5	6.1	8.8	13	5.5	8.8	1.5	1	1	0	1	1	1	0	Integral	membrane	protein	EMC3/TMCO1-like
L_protein_N	PF15518.6	gi|288560229|ref|YP_003423715.1|	-	0.0051	16.6	0.1	0.019	14.8	0.1	1.9	1	0	0	1	1	1	1	L	protein	N-terminus
PRC	PF05239.16	gi|288560229|ref|YP_003423715.1|	-	0.024	14.7	0.4	2	8.5	0.1	2.4	2	0	0	2	2	2	0	PRC-barrel	domain
Pinin_SDK_memA	PF04696.13	gi|288560229|ref|YP_003423715.1|	-	0.031	14.3	15.9	0.093	12.8	15.9	1.9	1	0	0	1	1	1	0	pinin/SDK/memA/	protein	conserved	region
ATP-synt_F	PF01990.17	gi|288560229|ref|YP_003423715.1|	-	0.22	11.9	3.0	0.47	10.8	0.9	2.7	2	1	1	3	3	3	0	ATP	synthase	(F/14-kDa)	subunit
Connexin	PF00029.19	gi|288560229|ref|YP_003423715.1|	-	2.2	8.0	6.1	5.1	6.8	6.1	1.6	1	0	0	1	1	1	0	Connexin
DUF1690	PF07956.11	gi|288560229|ref|YP_003423715.1|	-	2.2	8.7	16.7	1.2	9.6	12.8	2.2	2	0	0	2	2	2	0	Protein	of	Unknown	function	(DUF1690)
DNA_primase_S	PF01896.19	gi|288560231|ref|YP_003423717.1|	-	1.3e-13	51.3	0.1	2.2e-13	50.6	0.1	1.4	1	0	0	1	1	1	1	DNA	primase	small	subunit
SpoIIIAH	PF12685.7	gi|288560232|ref|YP_003423718.1|	-	0.00059	19.7	1.4	0.00077	19.3	1.4	1.1	1	0	0	1	1	1	1	SpoIIIAH-like	protein
PorA	PF11271.8	gi|288560232|ref|YP_003423718.1|	-	0.023	14.0	0.2	0.025	13.9	0.2	1.1	1	0	0	1	1	1	0	Porin	PorA
DUF2232	PF09991.9	gi|288560232|ref|YP_003423718.1|	-	0.086	12.0	0.4	0.13	11.5	0.4	1.3	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2232)
DUF2371	PF10177.9	gi|288560232|ref|YP_003423718.1|	-	0.1	12.8	0.1	0.14	12.4	0.1	1.3	1	1	0	1	1	1	0	Uncharacterised	conserved	protein	(DUF2371)
ABC2_membrane_3	PF12698.7	gi|288560232|ref|YP_003423718.1|	-	0.12	11.4	1.0	0.17	11.0	1.0	1.3	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
DUF948	PF06103.11	gi|288560232|ref|YP_003423718.1|	-	0.17	12.2	3.6	0.37	11.1	3.6	1.6	1	1	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF948)
HCO3_cotransp	PF00955.21	gi|288560232|ref|YP_003423718.1|	-	0.19	10.5	0.3	0.21	10.3	0.3	1.0	1	0	0	1	1	1	0	HCO3-	transporter	family
Big_3_5	PF16640.5	gi|288560235|ref|YP_003423721.1|	-	4.7e-30	103.6	40.5	3.4e-07	30.3	0.2	10.3	11	0	0	11	11	11	7	Bacterial	Ig-like	domain	(group	3)
CarboxypepD_reg	PF13620.6	gi|288560235|ref|YP_003423721.1|	-	1.4e-26	92.6	8.2	0.0033	17.7	0.0	9.1	9	0	0	9	9	9	6	Carboxypeptidase	regulatory-like	domain
Big_1	PF02369.16	gi|288560235|ref|YP_003423721.1|	-	1.5e-25	88.9	37.0	7.7e-09	35.4	0.6	11.0	11	0	0	11	11	11	7	Bacterial	Ig-like	domain	(group	1)
MG4	PF17789.1	gi|288560235|ref|YP_003423721.1|	-	5.4e-17	61.7	6.4	0.022	14.9	0.0	8.2	10	0	0	10	10	10	5	Macroglobulin	domain	MG4
Invasin_D3	PF09134.10	gi|288560235|ref|YP_003423721.1|	-	3.7e-09	36.8	33.6	4.3e-05	23.7	0.3	9.1	11	0	0	11	11	11	3	Invasin,	domain	3
SpaA	PF17802.1	gi|288560235|ref|YP_003423721.1|	-	0.03	14.6	21.3	4.1	7.8	0.1	7.8	6	2	0	6	6	6	0	Prealbumin-like	fold	domain
Chlam_PMP	PF02415.17	gi|288560235|ref|YP_003423721.1|	-	0.032	14.7	0.4	0.024	15.1	3.3	18.7	20	2	0	20	20	20	0	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
Big_3_5	PF16640.5	gi|288560236|ref|YP_003423722.1|	-	1.7e-32	111.5	111.3	4.7e-08	33.1	3.5	15.9	13	2	2	15	15	15	7	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|288560236|ref|YP_003423722.1|	-	2.7e-27	94.5	92.4	3.2e-07	30.3	8.1	15.7	15	2	2	17	17	17	8	Bacterial	Ig-like	domain	(group	1)
CarboxypepD_reg	PF13620.6	gi|288560236|ref|YP_003423722.1|	-	1.3e-21	76.7	57.1	0.00027	21.2	5.3	11.4	11	0	0	11	11	11	8	Carboxypeptidase	regulatory-like	domain
Beta_helix	PF13229.6	gi|288560236|ref|YP_003423722.1|	-	1e-13	51.5	110.5	1.2e-06	28.4	28.1	11.1	7	4	4	11	11	11	6	Right	handed	beta	helix	region
Invasin_D3	PF09134.10	gi|288560236|ref|YP_003423722.1|	-	2.1e-11	44.0	106.4	0.0003	21.0	9.6	15.5	15	0	0	15	15	15	7	Invasin,	domain	3
MG4	PF17789.1	gi|288560236|ref|YP_003423722.1|	-	5.9e-07	29.6	18.9	1.4	9.1	0.0	9.3	8	0	0	8	8	8	2	Macroglobulin	domain	MG4
DUF1565	PF07602.11	gi|288560236|ref|YP_003423722.1|	-	1.1e-05	24.9	4.0	1.1e-05	24.9	4.0	9.3	9	2	0	9	9	8	5	Protein	of	unknown	function	(DUF1565)
Adeno_E1B_55K	PF01696.17	gi|288560236|ref|YP_003423722.1|	-	4.1e-05	22.4	26.7	0.0004	19.2	3.6	5.0	4	1	1	5	5	5	3	Adenovirus	EB1	55K	protein	/	large	t-antigen
DUF4198	PF10670.9	gi|288560236|ref|YP_003423722.1|	-	0.0038	17.6	19.1	0.68	10.3	0.1	6.3	7	0	0	7	7	7	2	Domain	of	unknown	function	(DUF4198)
APT	PF03440.14	gi|288560236|ref|YP_003423722.1|	-	0.11	12.5	0.0	0.42	10.6	0.0	2.0	1	0	0	1	1	1	0	Aerolysin/Pertussis	toxin	(APT)	domain
SET_assoc	PF11767.8	gi|288560236|ref|YP_003423722.1|	-	1	9.0	3.5	8.9	6.0	0.1	3.6	4	0	0	4	4	4	0	Histone	lysine	methyltransferase	SET	associated
Helicase_C_2	PF13307.6	gi|288560238|ref|YP_003423724.1|	-	1.3e-22	80.7	0.0	4.6e-22	79.0	0.0	1.9	1	0	0	1	1	1	1	Helicase	C-terminal	domain
DEAD_2	PF06733.15	gi|288560238|ref|YP_003423724.1|	-	4.8e-11	42.6	0.5	2.1e-10	40.5	0.5	2.2	1	0	0	1	1	1	1	DEAD_2
ResIII	PF04851.15	gi|288560238|ref|YP_003423724.1|	-	5.6e-09	36.2	1.7	1.3e-08	35.1	0.1	2.4	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
TPR_2	PF07719.17	gi|288560238|ref|YP_003423724.1|	-	5e-05	23.1	6.7	0.19	12.0	0.1	4.5	4	0	0	4	4	4	2	Tetratricopeptide	repeat
DEAD	PF00270.29	gi|288560238|ref|YP_003423724.1|	-	0.00064	19.5	0.1	0.72	9.6	0.0	2.5	2	0	0	2	2	2	2	DEAD/DEAH	box	helicase
TPR_7	PF13176.6	gi|288560238|ref|YP_003423724.1|	-	0.001	19.0	1.3	2.5	8.3	0.1	3.9	3	0	0	3	3	3	2	Tetratricopeptide	repeat
SNF2_N	PF00176.23	gi|288560238|ref|YP_003423724.1|	-	0.0023	16.7	0.0	0.0045	15.8	0.0	1.4	1	0	0	1	1	1	1	SNF2	family	N-terminal	domain
Helicase_C	PF00271.31	gi|288560238|ref|YP_003423724.1|	-	0.003	17.9	0.0	0.013	15.8	0.0	2.2	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
TPR_1	PF00515.28	gi|288560238|ref|YP_003423724.1|	-	0.0043	16.8	6.1	0.68	9.9	0.1	3.9	3	0	0	3	3	3	2	Tetratricopeptide	repeat
AAA_22	PF13401.6	gi|288560238|ref|YP_003423724.1|	-	0.013	15.8	1.5	14	5.9	0.1	3.7	2	1	1	3	3	3	0	AAA	domain
TPR_16	PF13432.6	gi|288560238|ref|YP_003423724.1|	-	0.016	15.9	0.0	7.8	7.2	0.0	2.8	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|288560238|ref|YP_003423724.1|	-	0.035	14.4	0.5	7.8	6.9	0.0	3.2	3	0	0	3	3	2	0	Tetratricopeptide	repeat
MIT	PF04212.18	gi|288560238|ref|YP_003423724.1|	-	0.058	13.5	0.1	0.058	13.5	0.1	4.8	5	0	0	5	5	5	0	MIT	(microtubule	interacting	and	transport)	domain
TPR_3	PF07720.12	gi|288560238|ref|YP_003423724.1|	-	0.078	13.0	2.7	4.7	7.3	0.1	3.4	3	0	0	3	3	3	0	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|288560238|ref|YP_003423724.1|	-	0.37	11.5	4.0	25	5.8	0.1	3.8	3	0	0	3	3	3	0	Tetratricopeptide	repeat
DUF2080	PF09853.9	gi|288560240|ref|YP_003423726.1|	-	8.8e-09	35.0	0.0	1e-08	34.8	0.0	1.1	1	0	0	1	1	1	1	Putative	transposon-encoded	protein	(DUF2080)
DUF2251	PF10008.9	gi|288560241|ref|YP_003423727.1|	-	0.014	15.5	0.2	0.031	14.4	0.2	1.5	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2251)
DUF4528	PF15031.6	gi|288560242|ref|YP_003423728.1|	-	0.028	14.5	1.0	1.5	8.9	0.0	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4528)
SDF	PF00375.18	gi|288560243|ref|YP_003423729.1|	-	4.6e-69	233.3	31.8	5.5e-69	233.1	31.8	1.0	1	0	0	1	1	1	1	Sodium:dicarboxylate	symporter	family
tRNA_NucTransf2	PF09249.11	gi|288560244|ref|YP_003423730.1|	-	9.4e-38	128.9	0.0	2.3e-37	127.7	0.0	1.7	1	0	0	1	1	1	1	tRNA	nucleotidyltransferase,	second	domain
NTP_transf_2	PF01909.23	gi|288560244|ref|YP_003423730.1|	-	3.3e-16	59.4	0.2	1.1e-14	54.5	0.0	2.8	2	0	0	2	2	2	1	Nucleotidyltransferase	domain
SMODS	PF18144.1	gi|288560244|ref|YP_003423730.1|	-	5.2e-09	36.5	0.0	1.4e-08	35.1	0.0	1.7	1	0	0	1	1	1	1	Second	Messenger	Oligonucleotide	or	Dinucleotide	Synthetase	domain
MarR	PF01047.22	gi|288560245|ref|YP_003423731.1|	-	1.6e-13	50.4	0.2	2.5e-13	49.7	0.2	1.2	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.7	gi|288560245|ref|YP_003423731.1|	-	3.8e-08	33.1	0.0	5.4e-08	32.6	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.6	gi|288560245|ref|YP_003423731.1|	-	1e-06	28.1	0.2	2.2e-06	27.1	0.2	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_27	PF13463.6	gi|288560245|ref|YP_003423731.1|	-	9.6e-06	26.0	0.0	1.4e-05	25.5	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HxlR	PF01638.17	gi|288560245|ref|YP_003423731.1|	-	7.5e-05	22.5	0.0	0.0001	22.0	0.0	1.3	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_34	PF13601.6	gi|288560245|ref|YP_003423731.1|	-	0.00014	22.0	0.1	0.00023	21.3	0.1	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_11	PF08279.12	gi|288560245|ref|YP_003423731.1|	-	0.001	19.0	0.2	0.0024	17.8	0.2	1.7	1	0	0	1	1	1	1	HTH	domain
TrmB	PF01978.19	gi|288560245|ref|YP_003423731.1|	-	0.0048	16.8	0.1	0.0084	16.0	0.1	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_Crp_2	PF13545.6	gi|288560245|ref|YP_003423731.1|	-	0.022	14.7	0.0	0.034	14.1	0.0	1.3	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
HTH_CodY	PF08222.11	gi|288560245|ref|YP_003423731.1|	-	0.027	14.0	0.0	0.046	13.3	0.0	1.4	1	0	0	1	1	1	0	CodY	helix-turn-helix	domain
Fe_dep_repress	PF01325.19	gi|288560245|ref|YP_003423731.1|	-	0.033	14.4	0.0	0.058	13.6	0.0	1.4	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_41	PF14502.6	gi|288560245|ref|YP_003423731.1|	-	0.058	13.1	0.1	0.12	12.0	0.1	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
GntR	PF00392.21	gi|288560245|ref|YP_003423731.1|	-	0.062	13.0	0.0	0.11	12.2	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
DUF501	PF04417.12	gi|288560245|ref|YP_003423731.1|	-	0.064	13.1	0.0	0.1	12.4	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF501)
LAT2	PF15703.5	gi|288560246|ref|YP_003423732.1|	-	1.5	8.7	4.7	1.3	8.9	0.7	1.9	1	1	1	2	2	2	0	Linker	for	activation	of	T-cells	family	member	2
3HCDH_N	PF02737.18	gi|288560247|ref|YP_003423733.1|	-	3.3e-39	134.6	0.1	1.3e-37	129.4	0.1	2.6	2	1	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
3HCDH	PF00725.22	gi|288560247|ref|YP_003423733.1|	-	9.2e-16	58.3	0.0	1.6e-15	57.5	0.0	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
NAD_binding_2	PF03446.15	gi|288560247|ref|YP_003423733.1|	-	0.00033	20.9	0.0	0.67	10.1	0.0	2.7	2	1	1	3	3	3	2	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.23	gi|288560247|ref|YP_003423733.1|	-	0.0016	18.4	0.2	0.3	11.0	0.1	3.1	2	1	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
IlvN	PF07991.12	gi|288560247|ref|YP_003423733.1|	-	0.013	15.1	0.1	1.3	8.6	0.1	2.4	2	0	0	2	2	2	0	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
NAD_binding_7	PF13241.6	gi|288560247|ref|YP_003423733.1|	-	0.021	15.2	0.0	0.043	14.2	0.0	1.5	1	0	0	1	1	1	0	Putative	NAD(P)-binding
OTCace	PF00185.24	gi|288560247|ref|YP_003423733.1|	-	0.036	14.1	0.1	0.077	13.1	0.1	1.6	1	0	0	1	1	1	0	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
Pyr_redox_2	PF07992.14	gi|288560247|ref|YP_003423733.1|	-	0.055	12.7	0.0	0.18	11.0	0.0	1.8	1	1	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
AlaDh_PNT_C	PF01262.21	gi|288560247|ref|YP_003423733.1|	-	0.15	11.4	0.1	0.36	10.1	0.1	1.6	1	1	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
F420_oxidored	PF03807.17	gi|288560248|ref|YP_003423734.1|	-	5.2e-13	49.4	0.4	8.8e-13	48.7	0.4	1.4	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
IlvN	PF07991.12	gi|288560248|ref|YP_003423734.1|	-	0.00021	20.9	0.4	0.00037	20.1	0.1	1.5	2	0	0	2	2	2	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
adh_short	PF00106.25	gi|288560248|ref|YP_003423734.1|	-	0.0027	17.2	0.5	0.005	16.3	0.3	1.6	2	0	0	2	2	2	1	short	chain	dehydrogenase
YjeF_N	PF03853.15	gi|288560248|ref|YP_003423734.1|	-	0.028	14.3	0.0	0.055	13.4	0.0	1.4	1	1	0	1	1	1	0	YjeF-related	protein	N-terminus
NAD_binding_2	PF03446.15	gi|288560248|ref|YP_003423734.1|	-	0.045	13.9	0.1	0.11	12.7	0.0	1.6	2	0	0	2	2	2	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
3HCDH_N	PF02737.18	gi|288560248|ref|YP_003423734.1|	-	0.075	12.9	0.4	0.18	11.7	0.3	1.5	1	1	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
FAD_binding_3	PF01494.19	gi|288560248|ref|YP_003423734.1|	-	0.26	10.5	0.5	0.37	10.0	0.5	1.2	1	0	0	1	1	1	0	FAD	binding	domain
DDE_Tnp_1_6	PF13751.6	gi|288560249|ref|YP_003423735.1|	-	1.2e-19	70.8	1.1	5.1e-19	68.7	0.5	2.1	2	0	0	2	2	2	1	Transposase	DDE	domain
DDE_Tnp_1	PF01609.21	gi|288560249|ref|YP_003423735.1|	-	1.2e-11	44.6	0.8	7.4e-11	42.1	0.8	2.0	1	1	0	1	1	1	1	Transposase	DDE	domain
DUF772	PF05598.11	gi|288560249|ref|YP_003423735.1|	-	4.3e-06	26.7	0.0	1.1e-05	25.3	0.0	1.7	1	0	0	1	1	1	1	Transposase	domain	(DUF772)
SLAC1	PF03595.17	gi|288560250|ref|YP_003423736.1|	-	9.4e-21	74.4	47.0	1.1e-20	74.1	47.0	1.0	1	0	0	1	1	1	1	Voltage-dependent	anion	channel
Nitroreductase	PF00881.24	gi|288560251|ref|YP_003423737.1|	-	7.5e-30	104.2	0.0	8.1e-18	65.0	0.1	2.1	1	1	1	2	2	2	2	Nitroreductase	family
TM1586_NiRdase	PF14512.6	gi|288560251|ref|YP_003423737.1|	-	1.2e-18	67.5	0.1	1.1e-06	28.4	0.1	3.1	1	1	1	3	3	3	3	Putative	TM	nitroreductase
RRG8	PF17068.5	gi|288560251|ref|YP_003423737.1|	-	0.051	13.0	0.0	0.06	12.7	0.0	1.1	1	0	0	1	1	1	0	Required	for	respiratory	growth	protein	8	mitochondrial
Nitroreductase	PF00881.24	gi|288560252|ref|YP_003423738.1|	-	5.6e-22	78.6	0.3	1.5e-17	64.1	0.3	2.0	1	1	0	1	1	1	1	Nitroreductase	family
TM1586_NiRdase	PF14512.6	gi|288560252|ref|YP_003423738.1|	-	1.4e-10	41.1	0.3	1.9e-08	34.2	0.3	3.3	1	1	0	1	1	1	1	Putative	TM	nitroreductase
TBPIP_N	PF15517.6	gi|288560252|ref|YP_003423738.1|	-	0.099	12.7	0.0	0.17	11.9	0.0	1.3	1	0	0	1	1	1	0	TBP-interacting	protein	N-terminus
LigT_PEase	PF02834.16	gi|288560253|ref|YP_003423739.1|	-	4.7e-30	103.6	0.0	8.7e-15	54.7	0.0	2.1	2	0	0	2	2	2	2	LigT	like	Phosphoesterase
2_5_RNA_ligase2	PF13563.6	gi|288560253|ref|YP_003423739.1|	-	7.9e-16	58.3	0.0	9.1e-16	58.1	0.0	1.1	1	0	0	1	1	1	1	2'-5'	RNA	ligase	superfamily
DeoC	PF01791.9	gi|288560254|ref|YP_003423740.1|	-	1.9e-62	210.9	0.0	2.3e-62	210.7	0.0	1.0	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
DHQS	PF01959.16	gi|288560255|ref|YP_003423741.1|	-	3.9e-137	456.9	2.5	4.4e-137	456.7	2.5	1.0	1	0	0	1	1	1	1	3-dehydroquinate	synthase	II
Hint	PF01079.20	gi|288560255|ref|YP_003423741.1|	-	0.019	14.5	0.1	0.096	12.2	0.0	2.1	2	0	0	2	2	2	0	Hint	module
IF3_N	PF05198.16	gi|288560255|ref|YP_003423741.1|	-	0.88	9.9	3.2	5	7.5	0.0	3.2	4	0	0	4	4	4	0	Translation	initiation	factor	IF-3,	N-terminal	domain
Aminotran_3	PF00202.21	gi|288560256|ref|YP_003423742.1|	-	2.3e-67	227.5	0.0	2.7e-67	227.2	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-III
Aminotran_1_2	PF00155.21	gi|288560256|ref|YP_003423742.1|	-	0.0011	18.3	0.0	0.0015	17.8	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Beta_elim_lyase	PF01212.21	gi|288560256|ref|YP_003423742.1|	-	0.029	13.6	0.1	0.06	12.6	0.1	1.4	1	1	0	1	1	1	0	Beta-eliminating	lyase
DUF4012	PF13196.6	gi|288560257|ref|YP_003423743.1|	-	1.9e-25	90.0	0.0	2.8e-25	89.5	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4012)
Polbeta	PF18765.1	gi|288560257|ref|YP_003423743.1|	-	0.11	12.6	0.1	1.1	9.4	0.0	2.2	2	0	0	2	2	2	0	Polymerase	beta,	Nucleotidyltransferase
SNARE	PF05739.19	gi|288560257|ref|YP_003423743.1|	-	0.6	10.1	5.5	1.2	9.2	5.5	1.4	1	0	0	1	1	1	0	SNARE	domain
Methyltransf_11	PF08241.12	gi|288560258|ref|YP_003423744.1|	-	5.3e-19	68.7	0.0	7.2e-19	68.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|288560258|ref|YP_003423744.1|	-	3e-18	66.3	0.0	4.4e-18	65.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|288560258|ref|YP_003423744.1|	-	1.3e-14	54.4	0.0	1.6e-14	54.1	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|288560258|ref|YP_003423744.1|	-	3.3e-14	53.4	0.0	5.1e-14	52.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|288560258|ref|YP_003423744.1|	-	1e-11	44.9	0.0	1.2e-11	44.6	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|288560258|ref|YP_003423744.1|	-	1.3e-05	24.7	0.0	1.8e-05	24.2	0.0	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
N6_N4_Mtase	PF01555.18	gi|288560258|ref|YP_003423744.1|	-	3.6e-05	23.6	0.0	0.025	14.3	0.0	2.2	2	0	0	2	2	2	2	DNA	methylase
Methyltransf_8	PF05148.15	gi|288560258|ref|YP_003423744.1|	-	7.4e-05	22.7	0.1	0.00017	21.5	0.1	1.5	1	1	0	1	1	1	1	Hypothetical	methyltransferase
CMAS	PF02353.20	gi|288560258|ref|YP_003423744.1|	-	0.0003	20.2	0.0	0.00036	19.9	0.0	1.1	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
TehB	PF03848.14	gi|288560258|ref|YP_003423744.1|	-	0.0012	18.3	0.0	0.0019	17.6	0.0	1.3	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
Methyltransf_19	PF04672.12	gi|288560258|ref|YP_003423744.1|	-	0.0044	16.5	0.0	0.0058	16.1	0.0	1.1	1	0	0	1	1	1	1	S-adenosyl	methyltransferase
MetW	PF07021.12	gi|288560258|ref|YP_003423744.1|	-	0.0055	16.3	0.1	0.0077	15.8	0.1	1.1	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
MTS	PF05175.14	gi|288560258|ref|YP_003423744.1|	-	0.013	15.0	0.0	0.021	14.4	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	small	domain
PrmA	PF06325.13	gi|288560258|ref|YP_003423744.1|	-	0.018	14.4	0.0	0.026	13.9	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_4	PF02390.17	gi|288560258|ref|YP_003423744.1|	-	0.029	13.8	0.0	2.9	7.3	0.0	2.2	2	0	0	2	2	2	0	Putative	methyltransferase
NodS	PF05401.11	gi|288560258|ref|YP_003423744.1|	-	0.029	14.0	0.0	0.038	13.6	0.0	1.1	1	0	0	1	1	1	0	Nodulation	protein	S	(NodS)
POR	PF01558.18	gi|288560258|ref|YP_003423744.1|	-	0.041	14.0	0.0	0.059	13.4	0.0	1.2	1	0	0	1	1	1	0	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
AdoMet_MTase	PF07757.13	gi|288560258|ref|YP_003423744.1|	-	0.099	13.0	0.0	0.18	12.1	0.0	1.4	1	0	0	1	1	1	0	Predicted	AdoMet-dependent	methyltransferase
MFS_1	PF07690.16	gi|288560259|ref|YP_003423745.1|	-	3.2e-45	154.6	43.4	6.6e-37	127.2	18.2	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.24	gi|288560259|ref|YP_003423745.1|	-	8.3e-35	120.5	40.3	3.4e-32	111.9	40.3	2.1	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1_like	PF12832.7	gi|288560259|ref|YP_003423745.1|	-	0.0026	16.7	29.3	0.0041	16.0	12.9	2.4	1	1	1	2	2	2	2	MFS_1	like	family
KAP	PF05804.12	gi|288560259|ref|YP_003423745.1|	-	0.11	10.6	0.1	0.16	10.0	0.1	1.1	1	0	0	1	1	1	0	Kinesin-associated	protein	(KAP)
FMN_red	PF03358.15	gi|288560260|ref|YP_003423746.1|	-	2.9e-23	82.3	0.0	3.7e-23	82.0	0.0	1.1	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.17	gi|288560260|ref|YP_003423746.1|	-	1.8e-13	50.7	0.0	2.1e-13	50.4	0.0	1.1	1	0	0	1	1	1	1	Flavodoxin-like	fold
PTA_PTB	PF01515.19	gi|288560261|ref|YP_003423747.1|	-	0.0014	18.0	0.0	0.017	14.5	0.0	2.1	1	1	0	1	1	1	1	Phosphate	acetyl/butaryl	transferase
Prenyltransf	PF01255.19	gi|288560262|ref|YP_003423748.1|	-	5.8e-78	261.5	0.0	6.6e-78	261.3	0.0	1.0	1	0	0	1	1	1	1	Putative	undecaprenyl	diphosphate	synthase
Phage_TAC_8	PF10666.9	gi|288560262|ref|YP_003423748.1|	-	0.015	15.6	1.5	0.029	14.7	0.6	1.9	1	1	0	2	2	2	0	Phage	tail	assembly	chaperone	protein	Gp14	()A118
Pyr_redox_3	PF13738.6	gi|288560262|ref|YP_003423748.1|	-	0.026	13.8	0.1	0.032	13.5	0.1	1.1	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
TatD_DNase	PF01026.21	gi|288560263|ref|YP_003423749.1|	-	4e-67	226.3	0.4	4.5e-67	226.1	0.4	1.0	1	0	0	1	1	1	1	TatD	related	DNase
Amidohydro_2	PF04909.14	gi|288560263|ref|YP_003423749.1|	-	0.011	15.5	0.0	0.023	14.5	0.0	1.7	1	1	0	1	1	1	0	Amidohydrolase
RibD_C	PF01872.17	gi|288560264|ref|YP_003423750.1|	-	1.8e-58	197.7	0.0	2.4e-58	197.3	0.0	1.2	1	0	0	1	1	1	1	RibD	C-terminal	domain
PHP	PF02811.19	gi|288560266|ref|YP_003423752.1|	-	1.3e-06	28.8	0.0	1.8e-06	28.4	0.0	1.5	1	1	0	1	1	1	1	PHP	domain
ATPgrasp_N	PF18130.1	gi|288560266|ref|YP_003423752.1|	-	0.0017	18.9	0.5	0.036	14.6	0.1	2.6	3	0	0	3	3	3	1	ATP-grasp	N-terminal	domain
DFP	PF04127.15	gi|288560266|ref|YP_003423752.1|	-	0.059	13.2	0.4	0.77	9.6	0.1	2.3	1	1	1	2	2	2	0	DNA	/	pantothenate	metabolism	flavoprotein
RNase_P_p30	PF01876.16	gi|288560266|ref|YP_003423752.1|	-	0.13	11.8	0.0	0.25	10.8	0.0	1.4	1	0	0	1	1	1	0	RNase	P	subunit	p30
Pirin_C	PF05726.13	gi|288560266|ref|YP_003423752.1|	-	0.14	12.5	0.0	0.36	11.2	0.0	1.8	1	0	0	1	1	1	0	Pirin	C-terminal	cupin	domain
GHMP_kinases_N	PF00288.26	gi|288560267|ref|YP_003423753.1|	-	1.2e-06	28.7	0.4	2.8e-06	27.5	0.4	1.6	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
DUF2884	PF11101.8	gi|288560267|ref|YP_003423753.1|	-	0.019	14.5	0.3	0.028	13.9	0.3	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2884)
Methyltransf_24	PF13578.6	gi|288560268|ref|YP_003423754.1|	-	4.9e-05	24.3	0.0	9.2e-05	23.4	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
FtsJ	PF01728.19	gi|288560268|ref|YP_003423754.1|	-	0.00012	22.3	0.0	0.00014	22.1	0.0	1.1	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
Methyltransf_12	PF08242.12	gi|288560268|ref|YP_003423754.1|	-	0.00059	20.5	0.0	0.0011	19.7	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|288560268|ref|YP_003423754.1|	-	0.00067	19.5	0.0	0.00068	19.5	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|288560268|ref|YP_003423754.1|	-	0.0033	18.1	0.0	0.0054	17.4	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|288560268|ref|YP_003423754.1|	-	0.0044	16.8	0.0	0.0089	15.8	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
Fibrillarin	PF01269.17	gi|288560268|ref|YP_003423754.1|	-	0.058	12.5	0.0	0.076	12.1	0.0	1.1	1	0	0	1	1	1	0	Fibrillarin
TrkA_N	PF02254.18	gi|288560268|ref|YP_003423754.1|	-	0.077	13.3	0.0	0.12	12.6	0.0	1.3	1	0	0	1	1	1	0	TrkA-N	domain
Methyltransf_5	PF01795.19	gi|288560268|ref|YP_003423754.1|	-	0.078	12.5	0.0	0.1	12.1	0.0	1.1	1	0	0	1	1	1	0	MraW	methylase	family
DUF4012	PF13196.6	gi|288560269|ref|YP_003423755.1|	-	2.9e-14	53.8	0.1	4.2e-14	53.2	0.1	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4012)
CD34_antigen	PF06365.12	gi|288560269|ref|YP_003423755.1|	-	0.1	12.2	0.1	0.2	11.2	0.0	1.5	2	0	0	2	2	2	0	CD34/Podocalyxin	family
4HB_MCP_1	PF12729.7	gi|288560269|ref|YP_003423755.1|	-	0.13	11.8	0.4	0.24	10.9	0.4	1.4	1	0	0	1	1	1	0	Four	helix	bundle	sensory	module	for	signal	transduction
DUF1953	PF09196.10	gi|288560269|ref|YP_003423755.1|	-	0.13	12.0	0.3	7.2	6.5	0.0	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1953)
HI0933_like	PF03486.14	gi|288560270|ref|YP_003423756.1|	-	2.4e-114	382.2	0.0	7.7e-113	377.3	0.0	2.0	1	1	0	1	1	1	1	HI0933-like	protein
FAD_binding_2	PF00890.24	gi|288560270|ref|YP_003423756.1|	-	9.3e-08	31.6	0.1	0.00012	21.3	0.1	3.0	3	0	0	3	3	3	1	FAD	binding	domain
Pyr_redox_2	PF07992.14	gi|288560270|ref|YP_003423756.1|	-	9.7e-08	31.6	1.1	0.00036	19.9	0.2	2.7	2	1	1	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.24	gi|288560270|ref|YP_003423756.1|	-	1.3e-06	28.3	0.0	0.0029	17.3	0.0	2.2	1	1	1	2	2	2	2	FAD	dependent	oxidoreductase
GIDA	PF01134.22	gi|288560270|ref|YP_003423756.1|	-	1.1e-05	24.7	6.9	0.0014	17.8	0.6	2.7	2	1	0	2	2	2	2	Glucose	inhibited	division	protein	A
Pyr_redox_3	PF13738.6	gi|288560270|ref|YP_003423756.1|	-	1.7e-05	24.2	10.8	0.011	15.1	1.8	2.9	4	0	0	4	4	4	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_oxidored	PF12831.7	gi|288560270|ref|YP_003423756.1|	-	0.00015	21.2	0.0	0.00027	20.4	0.0	1.4	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.6	gi|288560270|ref|YP_003423756.1|	-	0.0064	16.7	0.0	0.015	15.6	0.0	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox	PF00070.27	gi|288560270|ref|YP_003423756.1|	-	0.011	16.3	2.0	4.6	7.9	0.0	3.3	3	0	0	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
Trp_halogenase	PF04820.14	gi|288560270|ref|YP_003423756.1|	-	0.042	12.7	0.0	0.066	12.1	0.0	1.3	1	0	0	1	1	1	0	Tryptophan	halogenase
Thi4	PF01946.17	gi|288560270|ref|YP_003423756.1|	-	0.052	12.8	0.1	0.18	11.0	0.0	1.9	2	0	0	2	2	2	0	Thi4	family
AlaDh_PNT_C	PF01262.21	gi|288560270|ref|YP_003423756.1|	-	0.14	11.5	0.0	0.25	10.6	0.0	1.4	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
FAD_binding_3	PF01494.19	gi|288560270|ref|YP_003423756.1|	-	0.14	11.4	0.3	0.39	9.9	0.1	1.8	2	0	0	2	2	2	0	FAD	binding	domain
DNA_pol3_beta_3	PF02768.15	gi|288560270|ref|YP_003423756.1|	-	0.55	10.1	4.0	2.5	7.9	0.0	3.1	4	0	0	4	4	3	0	DNA	polymerase	III	beta	subunit,	C-terminal	domain
Sigma70_r1_1	PF03979.14	gi|288560270|ref|YP_003423756.1|	-	4.2	7.5	9.5	0.31	11.1	3.7	2.1	2	0	0	2	2	2	0	Sigma-70	factor,	region	1.1
tRNA-synt_2	PF00152.20	gi|288560271|ref|YP_003423757.1|	-	2.3e-92	309.4	0.0	2.8e-92	309.2	0.0	1.0	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.25	gi|288560271|ref|YP_003423757.1|	-	7.7e-13	48.2	0.3	1.4e-12	47.4	0.3	1.5	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.20	gi|288560271|ref|YP_003423757.1|	-	7.4e-06	25.6	0.2	0.005	16.3	0.0	2.3	2	0	0	2	2	2	2	tRNA	synthetases	class	II	core	domain	(F)
Histidinol_dh	PF00815.20	gi|288560272|ref|YP_003423758.1|	-	2.3e-173	576.9	0.3	2.6e-173	576.7	0.3	1.0	1	0	0	1	1	1	1	Histidinol	dehydrogenase
DUF2096	PF09869.9	gi|288560272|ref|YP_003423758.1|	-	0.088	12.9	7.5	0.27	11.3	0.8	3.0	2	1	1	3	3	3	0	Uncharacterized	protein	conserved	in	archaea	(DUF2096)
sCache_like	PF16736.5	gi|288560272|ref|YP_003423758.1|	-	0.14	12.3	1.8	0.31	11.1	0.1	2.3	2	0	0	2	2	2	0	Single	Cache-like
UPF0058	PF01893.16	gi|288560273|ref|YP_003423759.1|	-	1.4e-33	115.0	3.1	1.7e-33	114.7	3.1	1.1	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0058
Wap1	PF16997.5	gi|288560273|ref|YP_003423759.1|	-	0.023	13.9	0.2	0.024	13.8	0.2	1.0	1	0	0	1	1	1	0	Wap1	domain
CENP-L	PF13092.6	gi|288560274|ref|YP_003423760.1|	-	0.092	13.0	0.0	0.15	12.2	0.0	1.3	1	0	0	1	1	1	0	Kinetochore	complex	Sim4	subunit	Fta1
TPR_1	PF00515.28	gi|288560275|ref|YP_003423761.1|	-	4.8e-13	48.3	14.1	0.017	14.9	0.2	6.4	7	0	0	7	7	7	4	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|288560275|ref|YP_003423761.1|	-	1.2e-11	43.8	12.5	0.0022	18.0	0.1	6.2	7	0	0	7	7	6	3	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|288560275|ref|YP_003423761.1|	-	7e-10	39.1	0.5	0.01	16.1	0.0	5.2	4	2	1	5	5	5	3	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|288560275|ref|YP_003423761.1|	-	2.8e-09	36.4	10.6	0.069	13.4	0.3	5.7	5	0	0	5	5	5	3	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|288560275|ref|YP_003423761.1|	-	4.9e-06	26.8	2.1	0.38	11.5	0.0	5.7	6	0	0	6	6	6	1	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|288560275|ref|YP_003423761.1|	-	0.00015	22.3	0.1	1.1	10.0	0.0	3.5	3	0	0	3	3	3	1	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|288560275|ref|YP_003423761.1|	-	0.00026	21.4	0.4	1.3	9.6	0.0	4.1	4	0	0	4	4	4	1	Tetratricopeptide	repeat
TPR_7	PF13176.6	gi|288560275|ref|YP_003423761.1|	-	0.00052	19.8	0.8	13	6.1	0.1	4.8	4	1	0	4	4	4	1	Tetratricopeptide	repeat
TPR_10	PF13374.6	gi|288560275|ref|YP_003423761.1|	-	0.0021	17.9	0.8	16	5.6	0.0	4.5	5	0	0	5	5	5	0	Tetratricopeptide	repeat
TPR_17	PF13431.6	gi|288560275|ref|YP_003423761.1|	-	0.0022	18.2	3.8	3.1	8.4	0.3	4.6	5	0	0	5	5	5	1	Tetratricopeptide	repeat
PPR	PF01535.20	gi|288560275|ref|YP_003423761.1|	-	0.011	15.9	3.0	45	4.6	0.0	5.3	5	0	0	5	5	5	0	PPR	repeat
TPR_14	PF13428.6	gi|288560275|ref|YP_003423761.1|	-	0.026	15.3	0.0	1.1e+02	4.1	0.0	4.5	5	0	0	5	5	4	0	Tetratricopeptide	repeat
MIT	PF04212.18	gi|288560275|ref|YP_003423761.1|	-	0.37	10.9	4.6	14	5.9	0.3	4.1	4	1	0	4	4	4	0	MIT	(microtubule	interacting	and	transport)	domain
C_GCAxxG_C_C	PF09719.10	gi|288560276|ref|YP_003423762.1|	-	1.8e-28	99.2	3.4	2e-28	99.0	3.4	1.0	1	0	0	1	1	1	1	Putative	redox-active	protein	(C_GCAxxG_C_C)
hnRNP_Q_AcD	PF18360.1	gi|288560276|ref|YP_003423762.1|	-	0.0055	16.6	0.0	0.015	15.2	0.0	1.7	1	0	0	1	1	1	1	Heterogeneous	nuclear	ribonucleoprotein	Q	acidic	domain
zf-RRN7	PF11781.8	gi|288560276|ref|YP_003423762.1|	-	0.05	13.3	2.2	1.9	8.2	0.1	2.6	2	0	0	2	2	2	0	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
DUF2182	PF09948.9	gi|288560276|ref|YP_003423762.1|	-	0.28	11.1	1.1	0.36	10.7	1.1	1.2	1	0	0	1	1	1	0	Predicted	metal-binding	integral	membrane	protein	(DUF2182)
RNase_Zc3h12a	PF11977.8	gi|288560277|ref|YP_003423763.1|	-	1.9e-20	73.3	1.0	3.9e-20	72.2	1.0	1.6	1	0	0	1	1	1	1	Zc3h12a-like	Ribonuclease	NYN	domain
PRORP	PF16953.5	gi|288560277|ref|YP_003423763.1|	-	0.00025	20.6	0.1	0.00044	19.9	0.1	1.4	1	0	0	1	1	1	1	Protein-only	RNase	P
DUF5615	PF18480.1	gi|288560277|ref|YP_003423763.1|	-	0.11	12.3	1.6	0.66	9.8	0.2	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF5615)
NapE	PF06796.11	gi|288560278|ref|YP_003423764.1|	-	2.4	7.7	4.0	5.4	6.6	4.0	1.5	1	0	0	1	1	1	0	Periplasmic	nitrate	reductase	protein	NapE
VirB3	PF05101.13	gi|288560278|ref|YP_003423764.1|	-	7.7	6.8	5.9	19	5.6	5.9	1.6	1	0	0	1	1	1	0	Type	IV	secretory	pathway,	VirB3-like	protein
LptF_LptG	PF03739.14	gi|288560279|ref|YP_003423765.1|	-	0.12	11.2	0.0	0.14	10.9	0.0	1.1	1	0	0	1	1	1	0	Lipopolysaccharide	export	system	permease	LptF/LptG
ArgJ	PF01960.18	gi|288560280|ref|YP_003423766.1|	-	1.4e-131	438.7	13.2	1.6e-131	438.5	13.2	1.0	1	0	0	1	1	1	1	ArgJ	family
Pox_C4_C10	PF03336.13	gi|288560280|ref|YP_003423766.1|	-	0.057	12.5	0.1	0.13	11.4	0.0	1.6	2	0	0	2	2	2	0	Poxvirus	C4/C10	protein
Ground-like	PF04155.18	gi|288560280|ref|YP_003423766.1|	-	0.064	13.9	0.0	0.23	12.2	0.0	1.9	1	0	0	1	1	1	0	Ground-like	domain
RcsD_ABL	PF16359.5	gi|288560280|ref|YP_003423766.1|	-	0.11	12.7	0.0	0.34	11.1	0.0	1.8	1	0	0	1	1	1	0	RcsD-ABL	domain
DUF1522	PF07482.11	gi|288560280|ref|YP_003423766.1|	-	0.15	12.4	4.2	0.18	12.1	1.0	2.7	2	1	1	3	3	3	0	Domain	of	Unknown	Function	(DUF1522)
DNA_pack_C	PF02499.15	gi|288560281|ref|YP_003423767.1|	-	0.014	14.3	0.1	0.02	13.9	0.1	1.1	1	0	0	1	1	1	0	Probable	DNA	packing	protein,	C-terminus
RNA_ligase	PF09414.10	gi|288560282|ref|YP_003423768.1|	-	4.8e-13	49.7	0.5	8.3e-13	49.0	0.5	1.4	1	0	0	1	1	1	1	RNA	ligase
Methyltransf_31	PF13847.6	gi|288560283|ref|YP_003423769.1|	-	3.9e-15	56.0	0.0	4.7e-15	55.7	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|288560283|ref|YP_003423769.1|	-	2.7e-13	50.3	0.0	4.1e-13	49.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|288560283|ref|YP_003423769.1|	-	1e-12	48.6	0.0	1.6e-12	48.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|288560283|ref|YP_003423769.1|	-	1.1e-09	38.0	0.1	1.5e-09	37.6	0.1	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_12	PF08242.12	gi|288560283|ref|YP_003423769.1|	-	1.4e-09	38.6	0.0	2.2e-09	37.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|288560283|ref|YP_003423769.1|	-	2.3e-07	30.8	0.0	3.1e-07	30.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_4	PF02390.17	gi|288560283|ref|YP_003423769.1|	-	2.4e-05	23.8	0.0	3.8e-05	23.2	0.0	1.3	1	0	0	1	1	1	1	Putative	methyltransferase
CMAS	PF02353.20	gi|288560283|ref|YP_003423769.1|	-	0.0003	20.2	0.0	0.00039	19.8	0.0	1.1	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
MTS	PF05175.14	gi|288560283|ref|YP_003423769.1|	-	0.0005	19.7	0.0	0.00066	19.3	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	small	domain
TehB	PF03848.14	gi|288560283|ref|YP_003423769.1|	-	0.0016	17.9	0.0	0.0019	17.6	0.0	1.1	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
Fibrillarin	PF01269.17	gi|288560283|ref|YP_003423769.1|	-	0.0023	17.1	0.0	0.0029	16.7	0.0	1.2	1	0	0	1	1	1	1	Fibrillarin
Methyltransf_8	PF05148.15	gi|288560283|ref|YP_003423769.1|	-	0.003	17.5	0.8	0.051	13.4	0.8	2.0	1	1	0	1	1	1	1	Hypothetical	methyltransferase
Methyltransf_2	PF00891.18	gi|288560283|ref|YP_003423769.1|	-	0.022	14.0	0.1	0.1	11.9	0.1	1.8	1	1	0	1	1	1	0	O-methyltransferase	domain
NodS	PF05401.11	gi|288560283|ref|YP_003423769.1|	-	0.065	12.8	0.0	0.086	12.4	0.0	1.1	1	0	0	1	1	1	0	Nodulation	protein	S	(NodS)
Methyltr_RsmB-F	PF01189.17	gi|288560283|ref|YP_003423769.1|	-	0.19	11.4	0.0	0.31	10.7	0.0	1.4	1	1	0	1	1	1	0	16S	rRNA	methyltransferase	RsmB/F
Methyltransf_29	PF03141.16	gi|288560283|ref|YP_003423769.1|	-	0.24	9.9	0.1	0.64	8.5	0.0	1.5	1	1	1	2	2	2	0	Putative	S-adenosyl-L-methionine-dependent	methyltransferase
Peptidase_C39	PF03412.15	gi|288560285|ref|YP_003423771.1|	-	1.4e-23	83.2	0.0	2.4e-22	79.2	0.0	2.1	2	0	0	2	2	2	1	Peptidase	C39	family
Peptidase_C39_2	PF13529.6	gi|288560285|ref|YP_003423771.1|	-	0.011	16.2	1.8	0.077	13.5	0.1	2.9	1	1	1	2	2	2	0	Peptidase_C39	like	family
DUF3335	PF11814.8	gi|288560285|ref|YP_003423771.1|	-	0.043	13.3	0.1	5.8	6.3	0.0	2.4	2	0	0	2	2	2	0	Peptidase_C39	like	family
AA_kinase	PF00696.28	gi|288560286|ref|YP_003423772.1|	-	1.4e-44	152.5	2.7	1.6e-44	152.3	2.7	1.0	1	0	0	1	1	1	1	Amino	acid	kinase	family
LpxB	PF02684.15	gi|288560286|ref|YP_003423772.1|	-	0.094	11.5	0.0	0.13	11.0	0.0	1.2	1	0	0	1	1	1	0	Lipid-A-disaccharide	synthetase
GatB_Yqey	PF02637.18	gi|288560286|ref|YP_003423772.1|	-	0.11	12.4	1.8	0.8	9.6	0.4	2.2	2	0	0	2	2	2	0	GatB	domain
DUF4013	PF13197.6	gi|288560287|ref|YP_003423773.1|	-	2.4e-10	40.5	16.5	2.4e-10	40.5	16.5	3.1	2	1	1	3	3	3	1	Protein	of	unknown	function	(DUF4013)
Ferlin_C	PF16165.5	gi|288560287|ref|YP_003423773.1|	-	0.074	13.0	0.8	0.074	13.0	0.8	2.9	3	1	1	4	4	4	0	Ferlin	C-terminus
DUF872	PF05915.12	gi|288560287|ref|YP_003423773.1|	-	3.1	8.0	12.1	6	7.1	0.3	2.7	2	1	0	2	2	2	0	Eukaryotic	protein	of	unknown	function	(DUF872)
adh_short_C2	PF13561.6	gi|288560288|ref|YP_003423774.1|	-	3.4e-63	213.3	0.2	3.9e-63	213.1	0.2	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.25	gi|288560288|ref|YP_003423774.1|	-	7e-59	198.6	1.6	8.8e-59	198.2	1.6	1.0	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.10	gi|288560288|ref|YP_003423774.1|	-	4.3e-17	62.6	0.3	7.2e-17	61.9	0.3	1.3	1	0	0	1	1	1	1	KR	domain
Shikimate_DH	PF01488.20	gi|288560288|ref|YP_003423774.1|	-	0.0017	18.4	0.1	0.0026	17.8	0.1	1.3	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
3HCDH_N	PF02737.18	gi|288560288|ref|YP_003423774.1|	-	0.0077	16.1	0.3	0.011	15.6	0.3	1.3	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Sacchrp_dh_NADP	PF03435.18	gi|288560288|ref|YP_003423774.1|	-	0.0096	16.2	0.1	0.014	15.7	0.1	1.3	1	0	0	1	1	1	1	Saccharopine	dehydrogenase	NADP	binding	domain
F420_oxidored	PF03807.17	gi|288560288|ref|YP_003423774.1|	-	0.034	14.7	0.2	0.059	14.0	0.2	1.4	1	0	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
DUF1776	PF08643.10	gi|288560288|ref|YP_003423774.1|	-	0.079	12.3	0.0	0.17	11.2	0.0	1.5	1	1	0	1	1	1	0	Fungal	family	of	unknown	function	(DUF1776)
Epimerase	PF01370.21	gi|288560288|ref|YP_003423774.1|	-	0.1	12.1	0.1	0.13	11.7	0.1	1.2	1	0	0	1	1	1	0	NAD	dependent	epimerase/dehydratase	family
AMP-binding	PF00501.28	gi|288560289|ref|YP_003423775.1|	-	2.5e-89	299.8	0.0	2.9e-89	299.6	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.6	gi|288560289|ref|YP_003423775.1|	-	2.2e-11	44.5	0.1	6.8e-11	43.0	0.0	1.8	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
Iso_dh	PF00180.20	gi|288560290|ref|YP_003423776.1|	-	3.9e-104	348.5	0.1	4.4e-104	348.4	0.1	1.0	1	0	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
DUF166	PF02593.14	gi|288560290|ref|YP_003423776.1|	-	0.025	14.1	0.0	0.043	13.4	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function
HEAT_2	PF13646.6	gi|288560291|ref|YP_003423777.1|	-	7e-29	100.1	10.0	1.7e-11	44.3	1.1	2.6	1	1	2	3	3	3	3	HEAT	repeats
HEAT	PF02985.22	gi|288560291|ref|YP_003423777.1|	-	1.4e-13	49.8	0.3	0.016	15.4	0.0	4.8	5	0	0	5	5	5	4	HEAT	repeat
HEAT_PBS	PF03130.16	gi|288560291|ref|YP_003423777.1|	-	2e-12	46.5	8.1	0.0049	17.4	0.5	4.5	4	0	0	4	4	4	3	PBS	lyase	HEAT-like	repeat
HEAT_EZ	PF13513.6	gi|288560291|ref|YP_003423777.1|	-	7.8e-12	45.4	2.7	0.022	15.2	0.0	4.9	5	0	0	5	5	5	3	HEAT-like	repeat
Arm	PF00514.23	gi|288560291|ref|YP_003423777.1|	-	1.3e-05	25.1	0.4	0.11	12.6	0.0	3.9	2	1	2	4	4	4	2	Armadillo/beta-catenin-like	repeat
Cnd1	PF12717.7	gi|288560291|ref|YP_003423777.1|	-	0.00056	20.0	0.1	6.4	6.8	0.0	3.3	2	1	1	3	3	3	2	non-SMC	mitotic	condensation	complex	subunit	1
Adaptin_N	PF01602.20	gi|288560291|ref|YP_003423777.1|	-	0.25	9.9	0.0	2.5	6.6	0.0	2.5	1	1	1	2	2	2	0	Adaptin	N	terminal	region
TrmB	PF01978.19	gi|288560292|ref|YP_003423778.1|	-	0.00032	20.5	0.4	0.83	9.6	0.0	2.6	2	1	1	3	3	3	2	Sugar-specific	transcriptional	regulator	TrmB
GST_N_4	PF17172.4	gi|288560292|ref|YP_003423778.1|	-	0.021	15.6	0.0	0.033	14.9	0.0	1.3	1	0	0	1	1	1	0	Glutathione	S-transferase	N-terminal	domain
S10_plectin	PF03501.15	gi|288560292|ref|YP_003423778.1|	-	0.029	14.5	0.1	0.63	10.1	0.1	2.5	1	1	2	3	3	3	0	Plectin/S10	domain
PadR	PF03551.14	gi|288560292|ref|YP_003423778.1|	-	0.06	13.3	1.0	8	6.5	0.2	2.9	2	1	0	2	2	2	0	Transcriptional	regulator	PadR-like	family
POTRA	PF07244.15	gi|288560292|ref|YP_003423778.1|	-	0.11	13.1	1.3	0.21	12.2	0.3	1.9	2	0	0	2	2	2	0	Surface	antigen	variable	number	repeat
Abhydrolase_1	PF00561.20	gi|288560293|ref|YP_003423779.1|	-	5.6e-22	78.6	0.0	1.7e-17	63.9	0.0	2.0	1	1	0	2	2	2	2	alpha/beta	hydrolase	fold
Hydrolase_4	PF12146.8	gi|288560293|ref|YP_003423779.1|	-	2.7e-17	62.8	0.0	4.4e-17	62.1	0.0	1.3	1	1	0	1	1	1	1	Serine	aminopeptidase,	S33
Abhydrolase_6	PF12697.7	gi|288560293|ref|YP_003423779.1|	-	1.6e-11	45.2	0.0	2.2e-11	44.8	0.0	1.2	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Ndr	PF03096.14	gi|288560293|ref|YP_003423779.1|	-	2.5e-07	29.7	0.0	2.9e-07	29.5	0.0	1.2	1	0	0	1	1	1	1	Ndr	family
Abhydrolase_5	PF12695.7	gi|288560293|ref|YP_003423779.1|	-	3.8e-05	23.5	0.2	0.002	17.9	0.0	2.2	2	0	0	2	2	2	1	Alpha/beta	hydrolase	family
Abhydrolase_2	PF02230.16	gi|288560293|ref|YP_003423779.1|	-	0.00021	21.1	0.1	0.027	14.3	0.0	2.8	2	1	1	3	3	3	1	Phospholipase/Carboxylesterase
PGAP1	PF07819.13	gi|288560293|ref|YP_003423779.1|	-	0.00023	21.0	0.0	0.052	13.3	0.0	2.3	1	1	0	1	1	1	1	PGAP1-like	protein
Esterase	PF00756.20	gi|288560293|ref|YP_003423779.1|	-	0.0059	16.3	0.0	0.0092	15.6	0.0	1.3	1	0	0	1	1	1	1	Putative	esterase
Abhydrolase_4	PF08386.10	gi|288560293|ref|YP_003423779.1|	-	0.039	14.1	0.0	0.061	13.4	0.0	1.2	1	0	0	1	1	1	0	TAP-like	protein
FSH1	PF03959.13	gi|288560293|ref|YP_003423779.1|	-	0.051	13.2	0.0	0.11	12.1	0.0	1.6	1	0	0	1	1	1	0	Serine	hydrolase	(FSH1)
BAAT_C	PF08840.11	gi|288560293|ref|YP_003423779.1|	-	0.1	12.5	0.0	0.22	11.4	0.0	1.7	1	1	0	1	1	1	0	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
NikR_C	PF08753.11	gi|288560294|ref|YP_003423780.1|	-	3.8e-31	107.1	7.7	3.8e-31	107.1	7.7	1.5	2	0	0	2	2	2	1	NikR	C	terminal	nickel	binding	domain
RHH_1	PF01402.21	gi|288560294|ref|YP_003423780.1|	-	2.2e-06	27.4	1.6	2.3e-06	27.3	0.1	1.7	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
Methyltransf_25	PF13649.6	gi|288560295|ref|YP_003423781.1|	-	5.7e-08	33.4	0.0	1.1e-07	32.5	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|288560295|ref|YP_003423781.1|	-	4.5e-07	29.8	0.1	7.9e-07	29.0	0.1	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.13	gi|288560295|ref|YP_003423781.1|	-	1.3e-06	28.1	0.0	2.1e-06	27.4	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
RrnaAD	PF00398.20	gi|288560295|ref|YP_003423781.1|	-	1.4e-05	24.3	0.0	2.3e-05	23.6	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_11	PF08241.12	gi|288560295|ref|YP_003423781.1|	-	7.8e-05	23.2	0.0	0.00014	22.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|288560295|ref|YP_003423781.1|	-	0.00026	20.6	0.0	0.00051	19.6	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_15	PF09445.10	gi|288560295|ref|YP_003423781.1|	-	0.00046	19.8	0.0	0.00078	19.1	0.0	1.4	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_PK	PF05891.12	gi|288560295|ref|YP_003423781.1|	-	0.0046	16.5	0.0	0.0073	15.8	0.0	1.3	1	0	0	1	1	1	1	AdoMet	dependent	proline	di-methyltransferase
Methyltransf_12	PF08242.12	gi|288560295|ref|YP_003423781.1|	-	0.0053	17.5	0.0	0.011	16.5	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_2	PF00891.18	gi|288560295|ref|YP_003423781.1|	-	0.0076	15.6	0.0	0.012	15.0	0.0	1.2	1	0	0	1	1	1	1	O-methyltransferase	domain
Methyltransf_23	PF13489.6	gi|288560295|ref|YP_003423781.1|	-	0.061	13.2	0.0	0.094	12.5	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
PCMT	PF01135.19	gi|288560295|ref|YP_003423781.1|	-	0.065	13.0	0.0	0.11	12.2	0.0	1.3	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
HycI	PF01750.18	gi|288560296|ref|YP_003423782.1|	-	2.6e-25	88.7	0.2	3.4e-25	88.4	0.2	1.1	1	0	0	1	1	1	1	Hydrogenase	maturation	protease
ATP-grasp_3	PF02655.14	gi|288560297|ref|YP_003423783.1|	-	6.8e-15	55.5	0.0	1.4e-14	54.5	0.0	1.5	1	1	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_Ter	PF15632.6	gi|288560297|ref|YP_003423783.1|	-	2e-09	37.3	0.0	5e-09	36.0	0.0	1.6	1	1	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
Dala_Dala_lig_C	PF07478.13	gi|288560297|ref|YP_003423783.1|	-	7.7e-09	35.4	0.2	1.1e-07	31.6	0.2	2.2	1	1	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
CPSase_L_D2	PF02786.17	gi|288560297|ref|YP_003423783.1|	-	1.2e-08	34.8	0.0	2.2e-08	33.9	0.0	1.4	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
RimK	PF08443.11	gi|288560297|ref|YP_003423783.1|	-	1.8e-06	27.7	0.0	1e-05	25.2	0.0	2.1	1	1	0	1	1	1	1	RimK-like	ATP-grasp	domain
ATPgrasp_ST	PF14397.6	gi|288560297|ref|YP_003423783.1|	-	2.9e-06	26.7	0.0	0.00018	20.9	0.1	2.1	2	0	0	2	2	2	1	Sugar-transfer	associated	ATP-grasp
ATP-grasp	PF02222.22	gi|288560297|ref|YP_003423783.1|	-	6e-06	25.9	0.0	9.7e-06	25.3	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
GARS_A	PF01071.19	gi|288560297|ref|YP_003423783.1|	-	0.0002	21.2	0.0	0.00039	20.3	0.0	1.4	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATP-grasp_4	PF13535.6	gi|288560297|ref|YP_003423783.1|	-	0.0049	16.5	0.1	0.02	14.5	0.0	2.0	2	0	0	2	2	2	1	ATP-grasp	domain
HGD-D	PF06050.13	gi|288560297|ref|YP_003423783.1|	-	0.0051	16.6	0.0	0.01	15.6	0.0	1.4	1	0	0	1	1	1	1	2-hydroxyglutaryl-CoA	dehydratase,	D-component
Glycos_transf_4	PF00953.21	gi|288560298|ref|YP_003423784.1|	-	9.6e-29	100.4	21.9	9.6e-29	100.4	21.9	3.7	2	1	0	3	3	3	1	Glycosyl	transferase	family	4
MraY_sig1	PF10555.9	gi|288560298|ref|YP_003423784.1|	-	9.6e-06	24.9	0.8	9.6e-06	24.9	0.8	2.2	2	0	0	2	2	2	1	Phospho-N-acetylmuramoyl-pentapeptide-transferase	signature	1
DUF4083	PF13314.6	gi|288560298|ref|YP_003423784.1|	-	0.046	13.7	0.2	0.046	13.7	0.2	3.3	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4083)
Ndc1_Nup	PF09531.10	gi|288560298|ref|YP_003423784.1|	-	4.6	5.8	5.9	0.36	9.5	0.8	1.6	2	0	0	2	2	2	0	Nucleoporin	protein	Ndc1-Nup
Mur_ligase_M	PF08245.12	gi|288560299|ref|YP_003423785.1|	-	1.8e-22	80.3	1.2	3.6e-22	79.3	0.3	2.0	2	1	0	2	2	2	1	Mur	ligase	middle	domain
Mur_ligase_C	PF02875.21	gi|288560299|ref|YP_003423785.1|	-	6.7e-05	23.1	0.0	0.00022	21.4	0.0	2.0	1	0	0	1	1	1	1	Mur	ligase	family,	glutamate	ligase	domain
MOZART1	PF12554.8	gi|288560299|ref|YP_003423785.1|	-	0.035	13.9	0.1	0.089	12.6	0.1	1.7	1	0	0	1	1	1	0	Mitotic-spindle	organizing	gamma-tubulin	ring	associated
DUF4145	PF13643.6	gi|288560300|ref|YP_003423786.1|	-	0.0012	18.9	0.2	0.0012	18.9	0.2	2.2	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4145)
DUF86	PF01934.17	gi|288560300|ref|YP_003423786.1|	-	0.028	14.3	0.5	0.11	12.4	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF86
zinc_ribbon_2	PF13240.6	gi|288560301|ref|YP_003423787.1|	-	0.016	14.9	4.8	0.016	14.9	4.8	2.0	2	0	0	2	2	2	0	zinc-ribbon	domain
DHHC	PF01529.20	gi|288560301|ref|YP_003423787.1|	-	0.026	14.6	1.3	0.045	13.8	1.3	1.4	1	0	0	1	1	1	0	DHHC	palmitoyltransferase
DZR	PF12773.7	gi|288560301|ref|YP_003423787.1|	-	0.028	14.5	1.2	0.048	13.7	1.2	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
Sec63	PF02889.16	gi|288560301|ref|YP_003423787.1|	-	0.047	12.8	1.7	0.074	12.2	1.7	1.6	1	1	0	1	1	1	0	Sec63	Brl	domain
UBX	PF00789.20	gi|288560301|ref|YP_003423787.1|	-	0.057	13.6	0.2	0.91	9.8	0.0	2.5	3	0	0	3	3	3	0	UBX	domain
zf-TFIIIC	PF12660.7	gi|288560301|ref|YP_003423787.1|	-	0.21	11.6	1.5	0.44	10.5	1.5	1.6	1	1	0	1	1	1	0	Putative	zinc-finger	of	transcription	factor	IIIC	complex
Tautomerase	PF01361.21	gi|288560302|ref|YP_003423788.1|	-	9.3e-11	41.5	0.1	9.8e-11	41.4	0.1	1.0	1	0	0	1	1	1	1	Tautomerase	enzyme
Tautomerase_2	PF14552.6	gi|288560302|ref|YP_003423788.1|	-	0.099	12.8	0.0	0.1	12.7	0.0	1.1	1	0	0	1	1	1	0	Tautomerase	enzyme
DUF1539	PF07560.11	gi|288560302|ref|YP_003423788.1|	-	0.13	12.3	0.0	0.14	12.3	0.0	1.1	1	0	0	1	1	1	0	Domain	of	Unknown	Function	(DUF1539)
PGA_cap	PF09587.10	gi|288560304|ref|YP_003423790.1|	-	6.6e-67	225.7	0.3	7.9e-67	225.4	0.3	1.1	1	0	0	1	1	1	1	Bacterial	capsule	synthesis	protein	PGA_cap
OppC_N	PF12911.7	gi|288560304|ref|YP_003423790.1|	-	0.0071	16.3	0.2	0.014	15.4	0.2	1.5	1	0	0	1	1	1	1	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
dUTPase	PF00692.19	gi|288560305|ref|YP_003423791.1|	-	5.1e-13	48.8	0.0	6.9e-13	48.4	0.0	1.2	1	0	0	1	1	1	1	dUTPase
Herpes_ORF11	PF04797.13	gi|288560305|ref|YP_003423791.1|	-	0.2	10.4	0.0	0.27	10.0	0.0	1.1	1	0	0	1	1	1	0	Herpesvirus	dUTPase	protein
Glycos_transf_2	PF00535.26	gi|288560306|ref|YP_003423792.1|	-	7e-37	126.8	0.3	1.2e-36	126.1	0.3	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.9	gi|288560306|ref|YP_003423792.1|	-	7.6e-16	58.4	0.7	7.6e-16	58.4	0.7	1.7	2	0	0	2	2	2	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_3	PF13641.6	gi|288560306|ref|YP_003423792.1|	-	2.1e-12	47.4	0.0	3.1e-12	46.9	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|288560306|ref|YP_003423792.1|	-	5.5e-05	23.6	0.2	0.00022	21.7	0.0	2.2	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
DivIC	PF04977.15	gi|288560306|ref|YP_003423792.1|	-	0.00026	20.7	4.6	0.00065	19.4	4.6	1.7	1	0	0	1	1	1	1	Septum	formation	initiator
ZapB	PF06005.12	gi|288560306|ref|YP_003423792.1|	-	0.0016	18.8	6.3	0.0034	17.8	6.3	1.5	1	0	0	1	1	1	1	Cell	division	protein	ZapB
bZIP_1	PF00170.21	gi|288560306|ref|YP_003423792.1|	-	0.003	17.6	10.6	0.007	16.4	10.6	1.6	1	0	0	1	1	1	1	bZIP	transcription	factor
NRBF2	PF08961.10	gi|288560306|ref|YP_003423792.1|	-	0.0033	17.1	4.3	0.0056	16.3	4.3	1.3	1	0	0	1	1	1	1	Nuclear	receptor-binding	factor	2,	autophagy	regulator
APG6_N	PF17675.1	gi|288560306|ref|YP_003423792.1|	-	0.43	11.1	8.5	0.47	11.0	7.2	1.7	1	1	0	1	1	1	0	Apg6	coiled-coil	region
YabA	PF06156.13	gi|288560306|ref|YP_003423792.1|	-	0.52	11.0	7.8	0.44	11.2	5.8	1.9	1	1	1	2	2	2	0	Initiation	control	protein	YabA
TSC22	PF01166.18	gi|288560306|ref|YP_003423792.1|	-	0.66	10.3	4.7	5	7.5	4.7	2.3	1	1	0	1	1	1	0	TSC-22/dip/bun	family
Cep57_CLD_2	PF14197.6	gi|288560306|ref|YP_003423792.1|	-	1.7	8.8	7.8	7.5	6.7	6.5	2.6	2	1	0	2	2	2	0	Centrosome	localisation	domain	of	PPC89
PRKG1_interact	PF15898.5	gi|288560306|ref|YP_003423792.1|	-	3	8.8	13.5	1.3e+02	3.6	13.5	2.5	1	1	0	1	1	1	0	cGMP-dependent	protein	kinase	interacting	domain
HisG	PF01634.18	gi|288560307|ref|YP_003423793.1|	-	3.1e-39	134.5	0.0	4.4e-39	134.0	0.0	1.2	1	0	0	1	1	1	1	ATP	phosphoribosyltransferase
HisG_C	PF08029.11	gi|288560307|ref|YP_003423793.1|	-	5.5e-05	23.2	0.0	0.00017	21.7	0.0	1.9	1	0	0	1	1	1	1	HisG,	C-terminal	domain
UDPG_MGDP_dh_N	PF03721.14	gi|288560308|ref|YP_003423794.1|	-	1.4e-28	99.8	0.2	3.6e-28	98.4	0.1	1.7	2	0	0	2	2	2	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
UDPG_MGDP_dh	PF00984.19	gi|288560308|ref|YP_003423794.1|	-	9.8e-27	93.0	0.0	1.9e-26	92.1	0.0	1.5	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	central	domain
UDPG_MGDP_dh_C	PF03720.15	gi|288560308|ref|YP_003423794.1|	-	1.7e-09	38.0	0.4	3.3e-07	30.7	0.0	3.1	3	0	0	3	3	3	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
ApbA	PF02558.16	gi|288560308|ref|YP_003423794.1|	-	3.8e-05	23.4	0.1	0.00014	21.6	0.0	1.8	2	0	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
3HCDH_N	PF02737.18	gi|288560308|ref|YP_003423794.1|	-	7.4e-05	22.7	0.2	0.00023	21.1	0.0	1.9	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.17	gi|288560308|ref|YP_003423794.1|	-	0.00045	20.8	0.1	0.85	10.2	0.0	3.1	3	1	0	3	3	3	2	NADP	oxidoreductase	coenzyme	F420-dependent
TrkA_N	PF02254.18	gi|288560308|ref|YP_003423794.1|	-	0.0021	18.3	0.2	0.04	14.2	0.0	2.6	2	0	0	2	2	2	1	TrkA-N	domain
NAD_Gly3P_dh_N	PF01210.23	gi|288560308|ref|YP_003423794.1|	-	0.0032	17.5	0.0	0.0071	16.3	0.0	1.6	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
RNA_binding	PF01877.17	gi|288560308|ref|YP_003423794.1|	-	0.086	13.1	0.0	0.31	11.3	0.0	1.9	1	0	0	1	1	1	0	RNA	binding
Semialdhyde_dh	PF01118.24	gi|288560308|ref|YP_003423794.1|	-	0.15	12.5	0.0	0.42	11.1	0.0	1.8	1	0	0	1	1	1	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
HrcA_DNA-bdg	PF03444.15	gi|288560309|ref|YP_003423795.1|	-	2.1e-37	126.6	0.2	6.6e-37	125.0	0.2	1.9	2	0	0	2	2	2	1	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
CBS	PF00571.28	gi|288560309|ref|YP_003423795.1|	-	3e-21	75.6	2.8	1.9e-11	44.2	0.3	2.8	3	0	0	3	3	3	2	CBS	domain
Rrf2	PF02082.20	gi|288560309|ref|YP_003423795.1|	-	5e-08	33.2	0.0	1.3e-07	31.8	0.0	1.7	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_11	PF08279.12	gi|288560309|ref|YP_003423795.1|	-	1.8e-05	24.6	0.0	4.2e-05	23.4	0.0	1.6	1	0	0	1	1	1	1	HTH	domain
HTH_38	PF13936.6	gi|288560309|ref|YP_003423795.1|	-	0.026	14.3	0.0	0.058	13.2	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
DS	PF01916.17	gi|288560310|ref|YP_003423796.1|	-	4.6e-88	295.2	0.0	5.2e-88	295.0	0.0	1.0	1	0	0	1	1	1	1	Deoxyhypusine	synthase
ThrE	PF06738.12	gi|288560311|ref|YP_003423797.1|	-	0.0017	17.8	3.1	0.0025	17.2	3.1	1.3	1	0	0	1	1	1	1	Putative	threonine/serine	exporter
NQR2_RnfD_RnfE	PF03116.15	gi|288560311|ref|YP_003423797.1|	-	0.0053	16.2	11.3	0.02	14.4	2.0	2.1	1	1	1	2	2	2	2	NQR2,	RnfD,	RnfE	family
Phage_holin_2_3	PF16080.5	gi|288560311|ref|YP_003423797.1|	-	0.15	11.8	3.7	0.18	11.6	0.9	2.4	2	0	0	2	2	2	0	Bacteriophage	holin	family	HP1
OMPdecase	PF00215.24	gi|288560312|ref|YP_003423798.1|	-	5e-35	121.1	0.0	6.8e-35	120.7	0.0	1.2	1	0	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
IspD	PF01128.19	gi|288560313|ref|YP_003423799.1|	-	2.6e-45	154.9	0.0	3e-45	154.7	0.0	1.0	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
NTP_transf_3	PF12804.7	gi|288560313|ref|YP_003423799.1|	-	4.6e-07	30.3	0.0	8.1e-07	29.5	0.0	1.6	1	1	0	1	1	1	1	MobA-like	NTP	transferase	domain
NTP_transferase	PF00483.23	gi|288560313|ref|YP_003423799.1|	-	2.3e-05	24.1	0.0	3.2e-05	23.7	0.0	1.2	1	0	0	1	1	1	1	Nucleotidyl	transferase
Uteroglobin	PF01099.17	gi|288560313|ref|YP_003423799.1|	-	0.064	13.6	0.0	0.17	12.3	0.0	1.7	1	0	0	1	1	1	0	Uteroglobin	family
Glu_dehyd_C	PF16912.5	gi|288560314|ref|YP_003423800.1|	-	7.5e-13	48.4	0.1	2e-12	47.1	0.0	1.7	2	0	0	2	2	2	1	Glucose	dehydrogenase	C-terminus
ADH_N	PF08240.12	gi|288560314|ref|YP_003423800.1|	-	1.9e-11	43.8	0.0	3.6e-11	42.9	0.0	1.5	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.26	gi|288560314|ref|YP_003423800.1|	-	7.4e-08	32.4	0.0	1.3e-07	31.6	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_N_2	PF16884.5	gi|288560314|ref|YP_003423800.1|	-	0.01	15.8	0.0	0.018	14.9	0.0	1.3	1	0	0	1	1	1	1	N-terminal	domain	of	oxidoreductase
Glycos_transf_2	PF00535.26	gi|288560315|ref|YP_003423801.1|	-	2.9e-27	95.5	0.8	6.1e-27	94.5	0.8	1.6	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|288560315|ref|YP_003423801.1|	-	1.4e-12	48.0	0.0	2e-12	47.5	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.9	gi|288560315|ref|YP_003423801.1|	-	4.6e-12	46.0	4.1	8.4e-12	45.1	3.9	1.7	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|288560315|ref|YP_003423801.1|	-	0.0015	19.0	0.1	0.0044	17.5	0.1	1.8	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
IBV_3B	PF03622.13	gi|288560315|ref|YP_003423801.1|	-	3.2	8.0	5.9	25	5.1	0.2	3.2	3	0	0	3	3	3	0	IBV	3B	protein
GDP_Man_Dehyd	PF16363.5	gi|288560317|ref|YP_003423803.1|	-	4.2e-95	318.9	0.0	4.8e-95	318.7	0.0	1.0	1	0	0	1	1	1	1	GDP-mannose	4,6	dehydratase
Epimerase	PF01370.21	gi|288560317|ref|YP_003423803.1|	-	5.3e-68	229.1	0.0	6.8e-68	228.7	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
3Beta_HSD	PF01073.19	gi|288560317|ref|YP_003423803.1|	-	2.8e-17	62.6	0.0	4.1e-17	62.1	0.0	1.2	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
Polysacc_synt_2	PF02719.15	gi|288560317|ref|YP_003423803.1|	-	1.2e-14	54.2	0.0	1.8e-14	53.6	0.0	1.3	1	0	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.12	gi|288560317|ref|YP_003423803.1|	-	1.9e-13	50.2	0.0	1.6e-09	37.4	0.0	2.5	2	1	0	2	2	2	2	Male	sterility	protein
RmlD_sub_bind	PF04321.17	gi|288560317|ref|YP_003423803.1|	-	2.8e-11	43.1	0.0	3.9e-11	42.6	0.0	1.2	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
NAD_binding_10	PF13460.6	gi|288560317|ref|YP_003423803.1|	-	2.6e-06	27.5	0.0	4e-06	26.9	0.0	1.3	1	0	0	1	1	1	1	NAD(P)H-binding
NifZ	PF04319.13	gi|288560317|ref|YP_003423803.1|	-	0.05	13.4	0.0	0.13	12.1	0.0	1.7	1	0	0	1	1	1	0	NifZ	domain
NmrA	PF05368.13	gi|288560317|ref|YP_003423803.1|	-	0.12	11.9	0.0	0.19	11.3	0.0	1.3	1	0	0	1	1	1	0	NmrA-like	family
adh_short	PF00106.25	gi|288560317|ref|YP_003423803.1|	-	0.12	11.8	0.0	3.1	7.2	0.0	2.2	2	0	0	2	2	2	0	short	chain	dehydrogenase
dTDP_sugar_isom	PF00908.17	gi|288560318|ref|YP_003423804.1|	-	4.7e-76	254.2	0.0	5.3e-76	254.0	0.0	1.0	1	0	0	1	1	1	1	dTDP-4-dehydrorhamnose	3,5-epimerase
NTP_transferase	PF00483.23	gi|288560319|ref|YP_003423805.1|	-	2.1e-65	220.7	0.0	2.5e-65	220.5	0.0	1.0	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.7	gi|288560319|ref|YP_003423805.1|	-	1.3e-09	38.6	0.0	1.6e-09	38.3	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
CTP_transf_3	PF02348.19	gi|288560319|ref|YP_003423805.1|	-	0.047	13.6	0.0	0.093	12.6	0.0	1.6	2	0	0	2	2	2	0	Cytidylyltransferase
Methyltransf_24	PF13578.6	gi|288560320|ref|YP_003423806.1|	-	6.6e-10	40.0	0.0	1.5e-09	38.9	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
SlyX	PF04102.12	gi|288560320|ref|YP_003423806.1|	-	0.0036	17.9	14.9	1.6	9.4	1.5	4.1	2	2	1	3	3	3	3	SlyX
APG6_N	PF17675.1	gi|288560320|ref|YP_003423806.1|	-	0.016	15.8	36.1	0.11	13.1	22.9	3.5	1	1	3	4	4	4	0	Apg6	coiled-coil	region
Methyltransf_23	PF13489.6	gi|288560320|ref|YP_003423806.1|	-	0.023	14.5	0.1	0.06	13.2	0.0	1.8	2	0	0	2	2	2	0	Methyltransferase	domain
ATG16	PF08614.11	gi|288560320|ref|YP_003423806.1|	-	0.082	13.1	34.7	0.12	12.6	9.0	3.2	1	1	2	3	3	3	0	Autophagy	protein	16	(ATG16)
DUF3450	PF11932.8	gi|288560320|ref|YP_003423806.1|	-	0.19	11.0	22.5	0.23	10.8	5.0	3.4	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF3450)
DUF4164	PF13747.6	gi|288560320|ref|YP_003423806.1|	-	0.86	9.9	19.9	4	7.8	1.3	3.7	1	1	3	4	4	4	0	Domain	of	unknown	function	(DUF4164)
Myosin_tail_1	PF01576.19	gi|288560320|ref|YP_003423806.1|	-	0.9	7.3	33.7	0.22	9.3	21.7	2.4	2	1	1	3	3	3	0	Myosin	tail
Spc7	PF08317.11	gi|288560320|ref|YP_003423806.1|	-	0.98	8.2	38.2	0.32	9.9	21.7	2.3	1	1	1	2	2	2	0	Spc7	kinetochore	protein
DUF1664	PF07889.12	gi|288560320|ref|YP_003423806.1|	-	1.2	9.2	23.4	2.6	8.1	6.8	3.3	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF1664)
SYCE1	PF15233.6	gi|288560320|ref|YP_003423806.1|	-	1.5	8.9	32.7	0.48	10.5	15.3	2.6	1	1	1	2	2	2	0	Synaptonemal	complex	central	element	protein	1
DUF3375	PF11855.8	gi|288560320|ref|YP_003423806.1|	-	2	7.2	4.3	9	5.1	0.3	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3375)
CENP-F_leu_zip	PF10473.9	gi|288560320|ref|YP_003423806.1|	-	4.9	7.2	42.6	17	5.4	21.4	3.5	1	1	3	4	4	4	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Golgin_A5	PF09787.9	gi|288560320|ref|YP_003423806.1|	-	7.5	5.9	27.6	3	7.2	14.7	1.9	1	1	1	2	2	2	0	Golgin	subfamily	A	member	5
HAUS-augmin3	PF14932.6	gi|288560320|ref|YP_003423806.1|	-	7.8	6.0	27.9	2.8	7.5	6.5	3.5	1	1	2	3	3	3	0	HAUS	augmin-like	complex	subunit	3
Glycos_transf_2	PF00535.26	gi|288560321|ref|YP_003423807.1|	-	4.7e-29	101.4	1.0	4.7e-29	101.4	1.0	2.1	3	0	0	3	3	3	1	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.9	gi|288560321|ref|YP_003423807.1|	-	1.7e-11	44.1	0.7	3.1e-11	43.3	0.7	1.4	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_3	PF13641.6	gi|288560321|ref|YP_003423807.1|	-	3.6e-08	33.6	0.0	5.5e-08	33.0	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|288560321|ref|YP_003423807.1|	-	0.019	15.5	0.3	0.084	13.4	0.1	2.1	2	0	0	2	2	2	0	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.6	gi|288560321|ref|YP_003423807.1|	-	0.047	13.2	0.0	0.082	12.4	0.0	1.3	1	0	0	1	1	1	0	Glycosyl	transferase	family	21
FlgT_M	PF16539.5	gi|288560321|ref|YP_003423807.1|	-	0.12	12.5	0.2	0.24	11.6	0.2	1.4	1	0	0	1	1	1	0	Flagellar	assembly	protein	T,	middle	domain
Glyco_trans_2_3	PF13632.6	gi|288560321|ref|YP_003423807.1|	-	0.13	12.1	0.0	0.26	11.2	0.0	1.5	1	1	0	1	1	1	0	Glycosyl	transferase	family	group	2
Glyphos_transf	PF04464.14	gi|288560322|ref|YP_003423808.1|	-	2.1e-08	33.6	0.6	3.5e-08	32.8	0.6	1.3	1	0	0	1	1	1	1	CDP-Glycerol:Poly(glycerophosphate)	glycerophosphotransferase
Fip1	PF05182.13	gi|288560322|ref|YP_003423808.1|	-	0.016	14.7	1.2	0.045	13.3	1.2	1.8	1	0	0	1	1	1	0	Fip1	motif
Rtt106_N	PF18215.1	gi|288560322|ref|YP_003423808.1|	-	0.21	11.4	1.3	0.81	9.5	0.0	2.5	2	0	0	2	2	2	0	Histone	chaperone	Rtt106	N-terminal	domain
Glyco_transf_4	PF13439.6	gi|288560323|ref|YP_003423809.1|	-	3.8e-09	36.8	0.0	7.6e-09	35.8	0.0	1.5	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glycos_transf_1	PF00534.20	gi|288560323|ref|YP_003423809.1|	-	7.4e-05	22.3	0.6	0.00027	20.5	0.0	2.3	2	1	0	2	2	2	1	Glycosyl	transferases	group	1
Gamma_PGA_hydro	PF05908.11	gi|288560323|ref|YP_003423809.1|	-	0.00017	21.0	0.1	0.00039	19.9	0.1	1.5	1	0	0	1	1	1	1	Poly-gamma-glutamate	hydrolase
Glycos_transf_2	PF00535.26	gi|288560323|ref|YP_003423809.1|	-	0.001	18.9	0.3	0.0027	17.5	0.3	1.8	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_trans_1_4	PF13692.6	gi|288560323|ref|YP_003423809.1|	-	0.0016	18.9	0.0	0.0033	17.9	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Hexapep	PF00132.24	gi|288560324|ref|YP_003423810.1|	-	3e-09	36.2	5.0	2.9e-06	26.8	0.0	2.9	3	0	0	3	3	3	2	Bacterial	transferase	hexapeptide	(six	repeats)
Hexapep_2	PF14602.6	gi|288560324|ref|YP_003423810.1|	-	3.9e-05	23.3	12.6	0.00013	21.7	0.3	3.5	3	1	0	3	3	3	2	Hexapeptide	repeat	of	succinyl-transferase
Glycos_transf_1	PF00534.20	gi|288560325|ref|YP_003423811.1|	-	2.4e-12	46.7	0.0	4.6e-12	45.8	0.0	1.6	1	1	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|288560325|ref|YP_003423811.1|	-	4.6e-07	30.3	0.0	7.7e-07	29.6	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|288560325|ref|YP_003423811.1|	-	0.00012	22.2	0.0	0.00026	21.0	0.0	1.7	1	1	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_1_2	PF13524.6	gi|288560325|ref|YP_003423811.1|	-	0.026	14.9	0.0	0.067	13.6	0.0	1.6	1	0	0	1	1	1	0	Glycosyl	transferases	group	1
Glycos_transf_2	PF00535.26	gi|288560326|ref|YP_003423812.1|	-	2.4e-65	219.5	0.9	1.1e-35	123.0	0.1	2.3	2	0	0	2	2	2	2	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.9	gi|288560326|ref|YP_003423812.1|	-	6.6e-27	94.7	7.4	2.6e-13	50.1	1.1	2.5	2	0	0	2	2	2	2	Glycosyltransferase	like	family	2
Glyco_tranf_2_3	PF13641.6	gi|288560326|ref|YP_003423812.1|	-	2.6e-22	79.8	0.0	4.5e-11	43.1	0.0	2.2	2	0	0	2	2	2	2	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|288560326|ref|YP_003423812.1|	-	1.9e-08	34.7	0.3	0.00049	20.5	0.0	3.1	3	1	0	3	3	3	2	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.6	gi|288560326|ref|YP_003423812.1|	-	0.053	13.0	0.0	0.77	9.2	0.0	2.2	2	0	0	2	2	2	0	Glycosyl	transferase	family	21
ABC2_membrane	PF01061.24	gi|288560327|ref|YP_003423813.1|	-	1.6e-19	70.2	28.8	1.6e-19	70.2	28.8	1.6	1	1	0	1	1	1	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.7	gi|288560327|ref|YP_003423813.1|	-	8.7	5.3	49.8	2.5	7.1	4.8	2.1	1	1	1	2	2	2	0	ABC-2	family	transporter	protein
ABC_tran	PF00005.27	gi|288560328|ref|YP_003423814.1|	-	4.5e-18	66.1	0.1	4.5e-18	66.1	0.1	3.6	2	2	0	2	2	2	1	ABC	transporter
MMR_HSR1	PF01926.23	gi|288560328|ref|YP_003423814.1|	-	0.0025	17.9	0.2	0.0025	17.9	0.2	2.9	2	1	0	2	2	2	1	50S	ribosome-binding	GTPase
AAA_29	PF13555.6	gi|288560328|ref|YP_003423814.1|	-	0.003	17.3	0.0	0.0081	15.9	0.0	1.7	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.6	gi|288560328|ref|YP_003423814.1|	-	0.02	15.4	2.3	0.02	15.4	2.3	3.7	1	1	2	3	3	3	0	AAA	domain
RsgA_GTPase	PF03193.16	gi|288560328|ref|YP_003423814.1|	-	0.02	14.8	2.9	0.021	14.7	0.0	2.3	2	0	0	2	2	2	0	RsgA	GTPase
AAA_30	PF13604.6	gi|288560328|ref|YP_003423814.1|	-	0.12	12.1	0.1	0.36	10.5	0.1	1.7	2	0	0	2	2	2	0	AAA	domain
ANTAR	PF03861.14	gi|288560328|ref|YP_003423814.1|	-	0.12	12.3	0.1	0.23	11.3	0.1	1.4	1	0	0	1	1	1	0	ANTAR	domain
NusG_II	PF07009.11	gi|288560328|ref|YP_003423814.1|	-	0.22	11.8	6.0	0.2	11.8	2.6	2.7	2	1	0	2	2	2	0	NusG	domain	II
Dicty_CAD	PF05720.12	gi|288560328|ref|YP_003423814.1|	-	0.52	10.3	4.7	0.53	10.3	1.9	2.5	2	0	0	2	2	2	0	Cell-cell	adhesion	domain
AAA_21	PF13304.6	gi|288560328|ref|YP_003423814.1|	-	1.5	8.5	19.9	0.13	12.0	0.9	4.1	3	2	1	5	5	5	0	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
Glycos_transf_2	PF00535.26	gi|288560329|ref|YP_003423815.1|	-	5.7e-67	224.8	6.8	7.7e-36	123.4	0.8	2.6	2	0	0	2	2	2	2	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|288560329|ref|YP_003423815.1|	-	1.8e-22	80.4	0.0	3.6e-11	43.4	0.0	2.2	2	0	0	2	2	2	2	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.9	gi|288560329|ref|YP_003423815.1|	-	2.2e-22	79.8	10.3	1.5e-12	47.6	3.2	2.5	2	0	0	2	2	2	2	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|288560329|ref|YP_003423815.1|	-	4.7e-08	33.4	0.1	0.013	16.0	0.1	3.1	2	0	0	2	2	2	2	Glycosyl	transferase	family	2
ERM	PF00769.19	gi|288560329|ref|YP_003423815.1|	-	0.00034	20.5	23.3	0.00073	19.4	23.3	1.5	1	0	0	1	1	1	1	Ezrin/radixin/moesin	family
DUF4472	PF14739.6	gi|288560329|ref|YP_003423815.1|	-	0.082	13.6	21.8	0.23	12.2	5.7	2.6	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4472)
STI1	PF17830.1	gi|288560329|ref|YP_003423815.1|	-	0.11	12.5	0.0	0.32	11.0	0.0	1.8	1	0	0	1	1	1	0	STI1	domain
HIP1_clath_bdg	PF16515.5	gi|288560329|ref|YP_003423815.1|	-	0.26	11.9	26.8	1	10.0	11.7	2.7	1	1	1	2	2	2	0	Clathrin-binding	domain	of	Huntingtin-interacting	protein	1
Fez1	PF06818.15	gi|288560329|ref|YP_003423815.1|	-	0.3	11.5	20.6	0.84	10.1	20.6	1.7	1	0	0	1	1	1	0	Fez1
Metal_resist	PF13801.6	gi|288560329|ref|YP_003423815.1|	-	0.61	10.3	5.1	1.2	9.3	3.5	1.9	1	1	2	3	3	3	0	Heavy-metal	resistance
Gly_transf_sug	PF04488.15	gi|288560330|ref|YP_003423816.1|	-	9.9e-07	29.3	6.3	1.4e-05	25.6	0.2	3.6	2	1	0	2	2	2	2	Glycosyltransferase	sugar-binding	region	containing	DXD	motif
UDPG_MGDP_dh_N	PF03721.14	gi|288560332|ref|YP_003423818.1|	-	2.7e-30	105.3	0.1	5.5e-30	104.3	0.1	1.5	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
UDPG_MGDP_dh	PF00984.19	gi|288560332|ref|YP_003423818.1|	-	2.9e-24	85.1	0.0	5.6e-24	84.2	0.0	1.5	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	central	domain
UDPG_MGDP_dh_C	PF03720.15	gi|288560332|ref|YP_003423818.1|	-	4e-09	36.8	0.7	1.4e-06	28.6	0.1	2.6	2	0	0	2	2	2	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
3HCDH_N	PF02737.18	gi|288560332|ref|YP_003423818.1|	-	3.1e-06	27.2	0.2	9.5e-06	25.6	0.0	2.0	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
ApbA	PF02558.16	gi|288560332|ref|YP_003423818.1|	-	0.00012	21.8	0.0	0.00023	20.8	0.0	1.4	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
NAD_Gly3P_dh_N	PF01210.23	gi|288560332|ref|YP_003423818.1|	-	0.0005	20.1	0.1	0.0014	18.6	0.0	1.7	1	1	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
F420_oxidored	PF03807.17	gi|288560332|ref|YP_003423818.1|	-	0.0021	18.6	0.0	0.016	15.7	0.0	2.5	2	1	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
Ldh_1_N	PF00056.23	gi|288560332|ref|YP_003423818.1|	-	0.0027	17.8	0.4	0.01	15.9	0.4	1.9	1	1	0	1	1	1	1	lactate/malate	dehydrogenase,	NAD	binding	domain
TrkA_N	PF02254.18	gi|288560332|ref|YP_003423818.1|	-	0.0028	17.9	0.2	0.022	15.0	0.0	2.4	2	0	0	2	2	2	1	TrkA-N	domain
DUF1133	PF06576.11	gi|288560332|ref|YP_003423818.1|	-	0.027	13.9	0.2	0.24	10.8	0.0	2.3	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1133)
2-Hacid_dh_C	PF02826.19	gi|288560332|ref|YP_003423818.1|	-	0.032	13.6	0.8	3.4	7.0	0.0	3.0	2	1	1	3	3	3	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Methyltrans_SAM	PF10672.9	gi|288560332|ref|YP_003423818.1|	-	0.058	12.5	0.0	0.095	11.8	0.0	1.3	1	0	0	1	1	1	0	S-adenosylmethionine-dependent	methyltransferase
Sacchrp_dh_NADP	PF03435.18	gi|288560332|ref|YP_003423818.1|	-	0.064	13.5	0.0	0.14	12.4	0.0	1.6	1	0	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
Prenylcys_lyase	PF07156.14	gi|288560332|ref|YP_003423818.1|	-	0.065	12.3	0.1	0.097	11.8	0.1	1.3	1	0	0	1	1	1	0	Prenylcysteine	lyase
Semialdhyde_dh	PF01118.24	gi|288560332|ref|YP_003423818.1|	-	0.078	13.4	0.0	0.17	12.3	0.0	1.6	1	0	0	1	1	1	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
NAD_binding_10	PF13460.6	gi|288560332|ref|YP_003423818.1|	-	0.17	11.8	0.2	1.7	8.5	0.2	2.4	1	1	0	1	1	1	0	NAD(P)H-binding
Big_1	PF02369.16	gi|288560333|ref|YP_003423819.1|	-	9.2e-25	86.4	27.3	9.5e-10	38.3	5.0	5.9	5	1	0	5	5	5	4	Bacterial	Ig-like	domain	(group	1)
Invasin_D3	PF09134.10	gi|288560333|ref|YP_003423819.1|	-	6.9e-15	55.1	28.0	5e-06	26.7	5.0	5.0	5	0	0	5	5	5	4	Invasin,	domain	3
Big_3_5	PF16640.5	gi|288560333|ref|YP_003423819.1|	-	1.1e-12	47.9	23.7	1.7e-08	34.5	7.5	4.6	4	0	0	4	4	4	2	Bacterial	Ig-like	domain	(group	3)
CarboxypepD_reg	PF13620.6	gi|288560333|ref|YP_003423819.1|	-	2.3e-11	43.8	14.7	0.069	13.4	0.1	4.7	4	0	0	4	4	4	4	Carboxypeptidase	regulatory-like	domain
MG4	PF17789.1	gi|288560333|ref|YP_003423819.1|	-	8.6e-07	29.0	12.6	0.061	13.5	0.2	4.9	5	0	0	5	5	5	3	Macroglobulin	domain	MG4
Pilin_N	PF07790.11	gi|288560333|ref|YP_003423819.1|	-	0.00013	22.8	4.8	4.5	8.3	0.2	4.6	4	0	0	4	4	4	2	Archaeal	Type	IV	pilin,	N-terminal
YtkA	PF13115.6	gi|288560333|ref|YP_003423819.1|	-	0.0067	17.0	4.5	0.038	14.6	0.2	3.7	4	0	0	4	4	4	1	YtkA-like
Chlam_PMP	PF02415.17	gi|288560333|ref|YP_003423819.1|	-	0.0086	16.5	3.9	0.0086	16.5	3.9	10.2	10	4	0	10	10	10	2	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
Big_1	PF02369.16	gi|288560334|ref|YP_003423820.1|	-	4.7e-20	71.3	11.5	1e-08	35.1	4.4	4.1	3	1	1	4	4	4	3	Bacterial	Ig-like	domain	(group	1)
Invasin_D3	PF09134.10	gi|288560334|ref|YP_003423820.1|	-	1.3e-12	47.8	14.3	7.1e-07	29.5	8.8	3.7	3	0	0	3	3	3	3	Invasin,	domain	3
Big_3_5	PF16640.5	gi|288560334|ref|YP_003423820.1|	-	1.9e-12	47.2	13.4	2.4e-06	27.7	7.0	3.5	3	0	0	3	3	3	2	Bacterial	Ig-like	domain	(group	3)
MG4	PF17789.1	gi|288560334|ref|YP_003423820.1|	-	2.2e-09	37.3	2.0	0.00025	21.1	0.0	3.5	3	0	0	3	3	3	3	Macroglobulin	domain	MG4
CarboxypepD_reg	PF13620.6	gi|288560334|ref|YP_003423820.1|	-	5.9e-07	29.7	5.1	0.14	12.4	0.1	3.6	3	0	0	3	3	3	3	Carboxypeptidase	regulatory-like	domain
YtkA	PF13115.6	gi|288560334|ref|YP_003423820.1|	-	0.025	15.2	0.1	3.2	8.4	0.1	2.9	2	0	0	2	2	2	0	YtkA-like
Homez	PF11569.8	gi|288560334|ref|YP_003423820.1|	-	0.14	11.6	0.0	0.3	10.6	0.0	1.4	1	0	0	1	1	1	0	Homeodomain	leucine-zipper	encoding,	Homez
Glyphos_transf	PF04464.14	gi|288560335|ref|YP_003423821.1|	-	1.8e-39	135.8	11.3	5.1e-39	134.3	11.3	1.8	1	0	0	1	1	1	1	CDP-Glycerol:Poly(glycerophosphate)	glycerophosphotransferase
Glycos_transf_2	PF00535.26	gi|288560335|ref|YP_003423821.1|	-	1.7e-26	93.0	0.2	1e-25	90.5	0.2	2.2	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.9	gi|288560335|ref|YP_003423821.1|	-	3.6e-13	49.6	2.1	5.2e-13	49.1	1.0	1.8	2	0	0	2	2	2	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_3	PF13641.6	gi|288560335|ref|YP_003423821.1|	-	1.1e-07	31.9	0.0	1.9e-07	31.2	0.0	1.4	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|288560335|ref|YP_003423821.1|	-	0.0083	16.6	0.3	0.058	13.9	0.1	2.7	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
PYST-C1	PF09690.10	gi|288560335|ref|YP_003423821.1|	-	7.1	6.5	15.2	0.68	9.7	9.9	2.1	2	0	0	2	2	2	0	Plasmodium	yoelii	subtelomeric	region	(PYST-C1)
Glyphos_transf	PF04464.14	gi|288560336|ref|YP_003423822.1|	-	8.7e-71	238.8	9.0	1.1e-70	238.5	9.0	1.0	1	0	0	1	1	1	1	CDP-Glycerol:Poly(glycerophosphate)	glycerophosphotransferase
DUF2149	PF09919.9	gi|288560337|ref|YP_003423823.1|	-	1.5e-19	70.1	0.4	1.7e-19	69.8	0.4	1.0	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2149)
Ion_trans	PF00520.31	gi|288560337|ref|YP_003423823.1|	-	0.019	14.2	0.0	0.02	14.1	0.0	1.1	1	0	0	1	1	1	0	Ion	transport	protein
tRNA-synt_2_TM	PF16995.5	gi|288560337|ref|YP_003423823.1|	-	0.044	13.5	0.0	0.05	13.3	0.0	1.1	1	0	0	1	1	1	0	Transmembrane	region	of	lysyl-tRNA	synthetase
DUF4834	PF16118.5	gi|288560337|ref|YP_003423823.1|	-	0.075	14.0	0.0	0.089	13.8	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4834)
DUF2162	PF09930.9	gi|288560338|ref|YP_003423824.1|	-	1.4e-47	162.0	35.4	1.7e-47	161.7	35.4	1.0	1	0	0	1	1	1	1	Predicted	transporter	(DUF2162)
MotA_ExbB	PF01618.16	gi|288560339|ref|YP_003423825.1|	-	1.7e-10	40.7	0.1	2.4e-10	40.2	0.1	1.2	1	0	0	1	1	1	1	MotA/TolQ/ExbB	proton	channel	family
FixQ	PF05545.11	gi|288560339|ref|YP_003423825.1|	-	0.017	15.0	0.4	0.039	13.9	0.0	1.8	2	1	0	2	2	2	0	Cbb3-type	cytochrome	oxidase	component	FixQ
QCR10	PF09796.9	gi|288560339|ref|YP_003423825.1|	-	0.032	14.3	0.0	0.49	10.5	0.0	2.4	2	0	0	2	2	2	0	Ubiquinol-cytochrome-c	reductase	complex	subunit	(QCR10)
Consortin_C	PF15281.6	gi|288560339|ref|YP_003423825.1|	-	0.14	12.2	2.5	3	7.9	1.0	2.2	2	0	0	2	2	2	0	Consortin	C-terminus
DUF3918	PF13056.6	gi|288560339|ref|YP_003423825.1|	-	0.72	9.5	3.2	4.9	6.9	0.0	2.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3918)
DUF347	PF03988.12	gi|288560339|ref|YP_003423825.1|	-	3.9	7.7	7.7	0.31	11.3	1.9	2.1	2	0	0	2	2	2	0	Repeat	of	Unknown	Function	(DUF347)
Ion_trans_2	PF07885.16	gi|288560340|ref|YP_003423826.1|	-	9.7e-13	47.9	10.7	9.7e-13	47.9	10.7	2.4	2	0	0	2	2	2	1	Ion	channel
UPF0242	PF06785.11	gi|288560340|ref|YP_003423826.1|	-	1e-07	32.3	0.5	1e-07	32.3	0.5	2.3	2	0	0	2	2	2	1	Uncharacterised	protein	family	(UPF0242)	N-terminus
Ion_trans	PF00520.31	gi|288560340|ref|YP_003423826.1|	-	7.1e-06	25.4	26.7	1.1e-05	24.9	26.7	1.2	1	0	0	1	1	1	1	Ion	transport	protein
Lig_chan	PF00060.26	gi|288560340|ref|YP_003423826.1|	-	4.3e-05	23.4	0.6	4.3e-05	23.4	0.6	1.8	2	1	0	2	2	1	1	Ligand-gated	ion	channel
BST2	PF16716.5	gi|288560340|ref|YP_003423826.1|	-	4.6e-05	23.9	8.1	6.7e-05	23.4	8.1	1.2	1	0	0	1	1	1	1	Bone	marrow	stromal	antigen	2
ATG16	PF08614.11	gi|288560340|ref|YP_003423826.1|	-	0.00012	22.3	11.1	0.00016	22.0	11.1	1.1	1	0	0	1	1	1	1	Autophagy	protein	16	(ATG16)
Atg14	PF10186.9	gi|288560340|ref|YP_003423826.1|	-	0.0015	17.6	6.1	0.0023	17.1	6.1	1.2	1	0	0	1	1	1	1	Vacuolar	sorting	38	and	autophagy-related	subunit	14
Spc7	PF08317.11	gi|288560340|ref|YP_003423826.1|	-	0.0077	15.2	9.8	0.01	14.7	9.8	1.1	1	0	0	1	1	1	1	Spc7	kinetochore	protein
DUF745	PF05335.13	gi|288560340|ref|YP_003423826.1|	-	0.0093	15.7	0.6	0.013	15.3	0.6	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF745)
Wtap	PF17098.5	gi|288560340|ref|YP_003423826.1|	-	0.013	15.4	5.1	0.031	14.2	4.5	1.9	2	0	0	2	2	2	0	WTAP/Mum2p	family
Ni_hydr_CYTB	PF01292.20	gi|288560340|ref|YP_003423826.1|	-	0.014	15.0	1.7	0.021	14.4	1.7	1.3	1	1	0	1	1	1	0	Prokaryotic	cytochrome	b561
DUF812	PF05667.11	gi|288560340|ref|YP_003423826.1|	-	0.024	13.6	5.5	0.028	13.3	5.5	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF812)
LPP	PF04728.13	gi|288560340|ref|YP_003423826.1|	-	0.028	14.8	2.4	0.028	14.8	2.4	1.6	2	0	0	2	2	1	0	Lipoprotein	leucine-zipper
SKA1	PF07160.12	gi|288560340|ref|YP_003423826.1|	-	0.029	14.2	5.5	0.037	13.9	5.5	1.1	1	0	0	1	1	1	0	Spindle	and	kinetochore-associated	protein	1
IRK	PF01007.20	gi|288560340|ref|YP_003423826.1|	-	0.038	13.8	0.3	0.038	13.8	0.3	2.0	2	0	0	2	2	2	0	Inward	rectifier	potassium	channel	transmembrane	domain
EMP24_GP25L	PF01105.24	gi|288560340|ref|YP_003423826.1|	-	0.046	13.7	2.6	0.11	12.4	2.6	1.6	1	0	0	1	1	1	0	emp24/gp25L/p24	family/GOLD
DUF2730	PF10805.8	gi|288560340|ref|YP_003423826.1|	-	0.046	13.8	1.7	0.13	12.3	0.8	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2730)
DUF16	PF01519.16	gi|288560340|ref|YP_003423826.1|	-	0.078	13.5	4.8	0.14	12.6	4.8	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF16
DUF948	PF06103.11	gi|288560340|ref|YP_003423826.1|	-	0.085	13.1	1.5	0.13	12.5	0.4	2.0	2	0	0	2	2	1	0	Bacterial	protein	of	unknown	function	(DUF948)
UL41A	PF17591.2	gi|288560340|ref|YP_003423826.1|	-	0.092	12.9	1.7	0.15	12.2	0.1	2.2	2	0	0	2	2	2	0	Herpesvirus	UL41A
Phage_HK97_TLTM	PF06120.11	gi|288560340|ref|YP_003423826.1|	-	0.12	11.5	7.5	0.24	10.6	7.5	1.5	1	0	0	1	1	1	0	Tail	length	tape	measure	protein
DUF1664	PF07889.12	gi|288560340|ref|YP_003423826.1|	-	0.19	11.8	3.6	0.36	10.9	3.6	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
Swi5	PF07061.11	gi|288560340|ref|YP_003423826.1|	-	0.25	11.5	6.2	0.25	11.5	4.9	1.6	2	0	0	2	2	1	0	Swi5
Laminin_II	PF06009.12	gi|288560340|ref|YP_003423826.1|	-	0.42	10.6	8.2	0.6	10.1	8.2	1.2	1	0	0	1	1	1	0	Laminin	Domain	II
Halogen_Hydrol	PF10112.9	gi|288560340|ref|YP_003423826.1|	-	0.45	10.5	10.7	0.06	13.4	5.0	2.5	2	1	0	2	2	2	0	5-bromo-4-chloroindolyl	phosphate	hydrolysis	protein
SlyX	PF04102.12	gi|288560340|ref|YP_003423826.1|	-	0.65	10.7	3.1	1	10.0	3.1	1.3	1	0	0	1	1	1	0	SlyX
DUF1043	PF06295.12	gi|288560340|ref|YP_003423826.1|	-	1.1	9.3	4.7	2.2	8.3	4.7	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1043)
FAM76	PF16046.5	gi|288560340|ref|YP_003423826.1|	-	1.8	7.8	6.0	2.3	7.5	6.0	1.1	1	0	0	1	1	1	0	FAM76	protein
YabA	PF06156.13	gi|288560340|ref|YP_003423826.1|	-	2.9	8.6	8.6	4.9	7.8	8.6	1.4	1	0	0	1	1	1	0	Initiation	control	protein	YabA
DivIC	PF04977.15	gi|288560340|ref|YP_003423826.1|	-	9.2	6.1	10.5	3.6	7.4	5.9	2.5	1	1	1	2	2	2	0	Septum	formation	initiator
PKcGMP_CC	PF16808.5	gi|288560341|ref|YP_003423827.1|	-	0.079	12.8	0.8	0.29	11.0	0.8	2.1	1	0	0	1	1	1	0	Coiled-coil	N-terminus	of	cGMP-dependent	protein	kinase
CTNNBL	PF08216.11	gi|288560341|ref|YP_003423827.1|	-	0.91	9.7	6.0	0.64	10.2	0.4	2.3	2	0	0	2	2	2	0	Catenin-beta-like,	Arm-motif	containing	nuclear
TPR_1	PF00515.28	gi|288560343|ref|YP_003423829.1|	-	1.1e-28	97.9	0.5	3.4e-07	29.8	0.0	4.2	4	0	0	4	4	4	4	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|288560343|ref|YP_003423829.1|	-	1.6e-28	96.5	0.5	9.1e-06	25.4	0.0	4.2	4	0	0	4	4	4	4	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|288560343|ref|YP_003423829.1|	-	4e-23	79.6	0.0	1.2e-06	28.3	0.0	4.3	4	0	0	4	4	4	4	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|288560343|ref|YP_003423829.1|	-	9.8e-15	54.8	0.0	4.7e-06	27.0	0.1	3.0	1	1	2	3	3	3	3	Tetratricopeptide	repeat
TPR_11	PF13414.6	gi|288560343|ref|YP_003423829.1|	-	8.3e-14	51.0	0.2	0.006	16.3	0.0	4.2	2	1	2	4	4	4	3	TPR	repeat
TPR_14	PF13428.6	gi|288560343|ref|YP_003423829.1|	-	9.2e-14	51.0	0.9	0.0016	19.1	0.0	4.0	1	1	3	4	4	4	3	Tetratricopeptide	repeat
TPR_17	PF13431.6	gi|288560343|ref|YP_003423829.1|	-	1e-12	47.5	0.6	0.00019	21.5	0.0	4.4	4	0	0	4	4	4	2	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|288560343|ref|YP_003423829.1|	-	2.1e-12	47.1	0.2	5e-06	26.7	0.2	3.9	2	1	0	3	3	3	2	Tetratricopeptide	repeat
TPR_7	PF13176.6	gi|288560343|ref|YP_003423829.1|	-	3.9e-11	42.2	0.2	0.32	11.1	0.8	4.2	4	0	0	4	4	4	3	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|288560343|ref|YP_003423829.1|	-	1.4e-10	41.7	0.0	8.9e-06	26.3	0.1	2.9	2	1	0	2	2	2	2	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|288560343|ref|YP_003423829.1|	-	7.9e-10	38.8	0.1	1.5e-07	31.5	0.0	2.2	1	1	1	2	2	2	1	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_9	PF13371.6	gi|288560343|ref|YP_003423829.1|	-	1.8e-08	34.4	0.1	3.7e-06	27.0	0.0	2.7	1	1	1	3	3	3	2	Tetratricopeptide	repeat
TPR_10	PF13374.6	gi|288560343|ref|YP_003423829.1|	-	6.2e-08	32.3	0.1	2	8.4	0.3	4.3	4	0	0	4	4	4	2	Tetratricopeptide	repeat
TPR_15	PF13429.6	gi|288560343|ref|YP_003423829.1|	-	1.2e-05	24.6	0.2	0.016	14.5	0.0	2.5	1	1	1	3	3	3	2	Tetratricopeptide	repeat
NARP1	PF12569.8	gi|288560343|ref|YP_003423829.1|	-	8e-05	21.7	0.0	0.27	10.1	0.0	2.0	1	1	1	2	2	2	2	NMDA	receptor-regulated	protein	1
TPR_6	PF13174.6	gi|288560343|ref|YP_003423829.1|	-	0.00031	21.2	0.0	44	5.0	0.0	4.1	4	0	0	4	4	4	0	Tetratricopeptide	repeat
Alkyl_sulf_dimr	PF14863.6	gi|288560343|ref|YP_003423829.1|	-	0.00062	20.2	0.1	0.038	14.4	0.1	2.2	2	0	0	2	2	2	1	Alkyl	sulfatase	dimerisation
TOM20_plant	PF06552.12	gi|288560343|ref|YP_003423829.1|	-	0.00074	19.3	1.3	0.052	13.3	0.0	3.0	2	1	1	3	3	3	1	Plant	specific	mitochondrial	import	receptor	subunit	TOM20
MIT	PF04212.18	gi|288560343|ref|YP_003423829.1|	-	0.001	19.1	0.6	0.064	13.3	0.2	3.3	4	0	0	4	4	4	1	MIT	(microtubule	interacting	and	transport)	domain
TPR_5	PF12688.7	gi|288560343|ref|YP_003423829.1|	-	0.0043	17.3	0.0	0.073	13.3	0.0	2.1	2	0	0	2	2	2	1	Tetratrico	peptide	repeat
Coatomer_E	PF04733.14	gi|288560343|ref|YP_003423829.1|	-	0.0073	15.7	0.9	0.39	10.1	0.1	2.7	1	1	2	3	3	3	1	Coatomer	epsilon	subunit
PPR	PF01535.20	gi|288560343|ref|YP_003423829.1|	-	0.011	16.0	2.8	11	6.5	0.0	4.3	5	0	0	5	5	4	0	PPR	repeat
Sel1	PF08238.12	gi|288560343|ref|YP_003423829.1|	-	0.011	16.3	0.4	0.026	15.2	0.4	1.7	1	0	0	1	1	1	0	Sel1	repeat
Fis1_TPR_C	PF14853.6	gi|288560343|ref|YP_003423829.1|	-	0.016	15.3	0.8	8.1	6.6	0.0	3.6	3	1	1	4	4	4	0	Fis1	C-terminal	tetratricopeptide	repeat
SNAP	PF14938.6	gi|288560343|ref|YP_003423829.1|	-	0.02	14.3	0.4	0.15	11.5	0.4	2.0	1	1	1	2	2	2	0	Soluble	NSF	attachment	protein,	SNAP
SPO22	PF08631.10	gi|288560343|ref|YP_003423829.1|	-	0.02	14.4	0.2	0.054	13.0	0.2	1.8	1	0	0	1	1	1	0	Meiosis	protein	SPO22/ZIP4	like
TPR_21	PF09976.9	gi|288560343|ref|YP_003423829.1|	-	0.028	14.1	0.4	4.5	6.9	0.6	2.5	1	1	2	3	3	3	0	Tetratricopeptide	repeat-like	domain
DUF3856	PF12968.7	gi|288560343|ref|YP_003423829.1|	-	0.034	14.2	0.1	6.1	6.9	0.1	3.1	2	1	0	2	2	2	0	Domain	of	Unknown	Function	(DUF3856)
SLATT_1	PF18181.1	gi|288560343|ref|YP_003423829.1|	-	0.076	13.0	0.0	0.11	12.4	0.0	1.3	1	0	0	1	1	1	0	SMODS	and	SLOG-associating	2TM	effector	domain	1
MAS20	PF02064.15	gi|288560343|ref|YP_003423829.1|	-	0.16	12.0	0.4	5.9	7.0	0.0	2.4	2	1	0	2	2	2	0	MAS20	protein	import	receptor
TPR_4	PF07721.14	gi|288560343|ref|YP_003423829.1|	-	0.18	12.5	0.0	17	6.4	0.0	3.2	3	0	0	3	3	3	0	Tetratricopeptide	repeat
UvrB_inter	PF17757.1	gi|288560344|ref|YP_003423830.1|	-	2.7e-31	107.6	0.7	7.3e-31	106.2	0.1	2.1	2	0	0	2	2	2	1	UvrB	interaction	domain
Helicase_C	PF00271.31	gi|288560344|ref|YP_003423830.1|	-	3e-18	66.2	0.1	8.9e-18	64.7	0.1	1.8	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
UvrB	PF12344.8	gi|288560344|ref|YP_003423830.1|	-	1.5e-16	59.9	3.3	3.1e-16	58.9	3.3	1.6	1	0	0	1	1	1	1	Ultra-violet	resistance	protein	B
ResIII	PF04851.15	gi|288560344|ref|YP_003423830.1|	-	1.4e-11	44.6	0.0	1.6e-10	41.3	0.0	2.5	3	0	0	3	3	3	1	Type	III	restriction	enzyme,	res	subunit
UVR	PF02151.19	gi|288560344|ref|YP_003423830.1|	-	3.2e-11	42.6	4.1	9.7e-11	41.1	4.1	1.9	1	0	0	1	1	1	1	UvrB/uvrC	motif
DEAD	PF00270.29	gi|288560344|ref|YP_003423830.1|	-	0.00045	20.0	0.0	0.0047	16.7	0.0	2.6	3	0	0	3	3	3	1	DEAD/DEAH	box	helicase
AAA_19	PF13245.6	gi|288560344|ref|YP_003423830.1|	-	0.0014	18.9	0.0	1.3	9.3	0.1	2.7	2	0	0	2	2	2	2	AAA	domain
DUF87	PF01935.17	gi|288560344|ref|YP_003423830.1|	-	0.0046	17.1	1.6	0.032	14.3	0.1	2.5	2	1	0	2	2	2	1	Helicase	HerA,	central	domain
AAA_30	PF13604.6	gi|288560344|ref|YP_003423830.1|	-	0.0052	16.5	0.0	0.24	11.1	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
Kinesin	PF00225.23	gi|288560344|ref|YP_003423830.1|	-	0.011	14.7	0.0	0.02	13.8	0.0	1.3	1	0	0	1	1	1	0	Kinesin	motor	domain
Microtub_bd	PF16796.5	gi|288560344|ref|YP_003423830.1|	-	0.012	15.5	0.0	0.035	14.0	0.0	1.7	1	0	0	1	1	1	0	Microtubule	binding
Big_1	PF02369.16	gi|288560345|ref|YP_003423831.1|	-	0.0041	17.1	0.7	0.0041	17.1	0.7	7.6	7	3	0	7	7	7	2	Bacterial	Ig-like	domain	(group	1)
YtkA	PF13115.6	gi|288560345|ref|YP_003423831.1|	-	0.0055	17.3	10.7	10	6.8	0.6	5.6	5	2	0	5	5	5	2	YtkA-like
bMG6	PF17962.1	gi|288560345|ref|YP_003423831.1|	-	0.018	15.2	13.1	12	6.0	0.9	6.4	5	3	2	7	7	7	0	Bacterial	macroglobulin	domain	6
L51_S25_CI-B8	PF05047.16	gi|288560345|ref|YP_003423831.1|	-	0.51	10.3	2.0	17	5.4	0.0	3.2	3	0	0	3	3	3	0	Mitochondrial	ribosomal	protein	L51	/	S25	/	CI-B8	domain
DHquinase_I	PF01487.15	gi|288560346|ref|YP_003423832.1|	-	9.8e-55	186.3	0.3	1.1e-54	186.1	0.3	1.0	1	0	0	1	1	1	1	Type	I	3-dehydroquinase
Importin_rep_6	PF18829.1	gi|288560347|ref|YP_003423833.1|	-	0.11	12.6	0.3	4.5	7.5	0.0	2.4	2	0	0	2	2	2	0	Importin	repeat	6
CoA_binding	PF02629.19	gi|288560348|ref|YP_003423834.1|	-	3.2e-27	95.0	0.3	3.2e-27	95.0	0.3	2.6	3	1	1	4	4	4	1	CoA	binding	domain
Ligase_CoA	PF00549.19	gi|288560348|ref|YP_003423834.1|	-	3.3e-17	62.7	0.2	5.5e-17	62.0	0.2	1.3	1	0	0	1	1	1	1	CoA-ligase
Succ_CoA_lig	PF13607.6	gi|288560348|ref|YP_003423834.1|	-	6.3e-11	42.2	0.0	1e-10	41.6	0.0	1.3	1	0	0	1	1	1	1	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding_2	PF13380.6	gi|288560348|ref|YP_003423834.1|	-	7.1e-06	26.5	0.0	0.00012	22.6	0.0	2.7	2	1	0	2	2	2	1	CoA	binding	domain
GFO_IDH_MocA	PF01408.22	gi|288560348|ref|YP_003423834.1|	-	0.025	15.4	0.6	0.29	12.0	0.2	2.7	2	1	0	2	2	2	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
HMG-CoA_red	PF00368.18	gi|288560349|ref|YP_003423835.1|	-	7.7e-128	426.6	2.4	8.8e-128	426.4	2.4	1.0	1	0	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	reductase
ArdA	PF07275.11	gi|288560350|ref|YP_003423836.1|	-	0.13	12.8	2.1	0.2	12.2	2.1	1.3	1	1	0	1	1	1	0	Antirestriction	protein	(ArdA)
CBP_BcsG	PF11658.8	gi|288560350|ref|YP_003423836.1|	-	0.38	9.1	2.7	0.17	10.2	0.2	1.6	2	0	0	2	2	2	0	Cellulose	biosynthesis	protein	BcsG
Zn-ribbon_8	PF09723.10	gi|288560351|ref|YP_003423837.1|	-	7.6e-06	25.9	0.8	1.3e-05	25.2	0.8	1.4	1	0	0	1	1	1	1	Zinc	ribbon	domain
HypA	PF01155.19	gi|288560351|ref|YP_003423837.1|	-	7.5e-05	22.7	0.8	7.5e-05	22.7	0.8	1.0	1	0	0	1	1	1	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
TFIIS_C	PF01096.18	gi|288560351|ref|YP_003423837.1|	-	0.00038	20.2	1.7	0.062	13.2	0.3	2.2	2	0	0	2	2	2	2	Transcription	factor	S-II	(TFIIS)
DZR	PF12773.7	gi|288560351|ref|YP_003423837.1|	-	0.0023	17.9	0.5	0.0029	17.6	0.5	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
Prok-RING_1	PF14446.6	gi|288560351|ref|YP_003423837.1|	-	0.0027	17.6	1.6	0.0034	17.3	1.6	1.2	1	0	0	1	1	1	1	Prokaryotic	RING	finger	family	1
Zn_ribbon_SprT	PF17283.2	gi|288560351|ref|YP_003423837.1|	-	0.0036	17.2	0.7	0.33	10.9	0.0	2.1	2	0	0	2	2	2	1	SprT-like	zinc	ribbon	domain
Zn_Tnp_IS1595	PF12760.7	gi|288560351|ref|YP_003423837.1|	-	0.0043	17.0	0.2	1.3	9.0	0.0	2.1	2	0	0	2	2	2	2	Transposase	zinc-ribbon	domain
zinc_ribbon_9	PF14369.6	gi|288560351|ref|YP_003423837.1|	-	0.005	17.1	0.1	0.8	10.0	0.1	2.2	2	0	0	2	2	2	1	zinc-ribbon
zinc-ribbons_6	PF07191.12	gi|288560351|ref|YP_003423837.1|	-	0.0056	16.6	0.8	0.0058	16.6	0.8	1.2	1	0	0	1	1	1	1	zinc-ribbons
Zn_Tnp_IS1	PF03811.13	gi|288560351|ref|YP_003423837.1|	-	0.0082	15.9	2.3	0.044	13.5	0.3	2.2	2	0	0	2	2	2	1	InsA	N-terminal	domain
zinc_ribbon_10	PF10058.9	gi|288560351|ref|YP_003423837.1|	-	0.016	14.9	1.0	2.8	7.7	0.1	2.1	2	0	0	2	2	2	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
zf-UBR	PF02207.20	gi|288560351|ref|YP_003423837.1|	-	0.019	15.1	0.4	0.023	14.9	0.4	1.2	1	0	0	1	1	1	0	Putative	zinc	finger	in	N-recognin	(UBR	box)
DUF35_N	PF12172.8	gi|288560351|ref|YP_003423837.1|	-	0.024	14.5	0.6	0.66	9.9	0.1	2.2	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF2614	PF11023.8	gi|288560351|ref|YP_003423837.1|	-	0.033	14.3	0.3	0.037	14.1	0.3	1.1	1	0	0	1	1	1	0	Zinc-ribbon	containing	domain
zf-HIT	PF04438.16	gi|288560351|ref|YP_003423837.1|	-	0.055	13.3	3.3	0.42	10.5	0.5	2.3	2	0	0	2	2	2	0	HIT	zinc	finger
zf-LITAF-like	PF10601.9	gi|288560351|ref|YP_003423837.1|	-	0.073	13.3	2.0	3.1	8.1	0.2	2.1	2	0	0	2	2	2	0	LITAF-like	zinc	ribbon	domain
PhnA_Zn_Ribbon	PF08274.12	gi|288560351|ref|YP_003423837.1|	-	0.077	13.0	1.5	1.5	8.8	0.2	2.3	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
Desulfoferrod_N	PF06397.12	gi|288560351|ref|YP_003423837.1|	-	0.083	12.5	1.4	0.15	11.7	1.4	1.6	1	1	0	1	1	1	0	Desulfoferrodoxin,	N-terminal	domain
Zn_Tnp_IS91	PF14319.6	gi|288560351|ref|YP_003423837.1|	-	0.092	12.8	1.4	0.13	12.3	1.4	1.3	1	1	0	1	1	1	0	Transposase	zinc-binding	domain
TF_Zn_Ribbon	PF08271.12	gi|288560351|ref|YP_003423837.1|	-	0.12	11.9	2.5	3.5	7.2	0.2	2.2	2	0	0	2	2	2	0	TFIIB	zinc-binding
zf-trcl	PF13451.6	gi|288560351|ref|YP_003423837.1|	-	0.16	11.9	3.1	0.7	9.8	0.5	2.1	2	0	0	2	2	2	0	Probable	zinc-ribbon	domain
zinc_ribbon_4	PF13717.6	gi|288560351|ref|YP_003423837.1|	-	0.23	11.4	4.8	5.4	7.0	0.9	2.2	1	1	0	2	2	2	0	zinc-ribbon	domain
Rubredoxin_2	PF18073.1	gi|288560351|ref|YP_003423837.1|	-	0.36	10.6	3.8	8.4	6.2	0.1	2.2	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
zf-NADH-PPase	PF09297.11	gi|288560351|ref|YP_003423837.1|	-	0.51	10.0	3.5	1.9	8.2	0.1	2.5	2	1	1	3	3	3	0	NADH	pyrophosphatase	zinc	ribbon	domain
Reductase_C	PF14759.6	gi|288560352|ref|YP_003423838.1|	-	0.094	13.3	0.0	0.14	12.7	0.0	1.3	1	0	0	1	1	1	0	Reductase	C-terminal
DUF116	PF01976.17	gi|288560353|ref|YP_003423839.1|	-	4.1e-48	162.8	0.2	5e-48	162.5	0.2	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF116
Prominin	PF05478.11	gi|288560353|ref|YP_003423839.1|	-	0.14	10.1	2.9	0.2	9.6	2.9	1.1	1	0	0	1	1	1	0	Prominin
NS3_envE	PF02723.14	gi|288560353|ref|YP_003423839.1|	-	1.7	8.8	8.7	4	7.6	8.7	1.6	1	0	0	1	1	1	0	Non-structural	protein	NS3/Small	envelope	protein	E
OAD_gamma	PF04277.13	gi|288560353|ref|YP_003423839.1|	-	9.4	6.9	7.9	6.4	7.4	5.7	1.9	2	0	0	2	2	2	0	Oxaloacetate	decarboxylase,	gamma	chain
ASRT	PF07100.11	gi|288560354|ref|YP_003423840.1|	-	0.069	13.2	0.0	0.27	11.3	0.0	1.7	1	1	1	2	2	2	0	Anabaena	sensory	rhodopsin	transducer
Ribo_biogen_C	PF04034.13	gi|288560356|ref|YP_003423842.1|	-	5.1e-48	162.0	0.0	6.1e-48	161.7	0.0	1.1	1	0	0	1	1	1	1	Ribosome	biogenesis	protein,	C-terminal
RLI	PF04068.15	gi|288560356|ref|YP_003423842.1|	-	8e-07	28.8	2.7	1.2e-06	28.3	2.7	1.3	1	0	0	1	1	1	1	Possible	Fer4-like	domain	in	RNase	L	inhibitor,	RLI
Ribosomal_L40e	PF01020.17	gi|288560357|ref|YP_003423843.1|	-	4.2e-05	23.4	3.3	4.8e-05	23.2	3.3	1.1	1	0	0	1	1	1	1	Ribosomal	L40e	family
zinc_ribbon_2	PF13240.6	gi|288560357|ref|YP_003423843.1|	-	0.00013	21.6	4.5	0.00019	21.1	4.5	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|288560357|ref|YP_003423843.1|	-	0.00067	19.6	0.6	0.00067	19.6	0.6	1.1	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-ribbon_3	PF13248.6	gi|288560357|ref|YP_003423843.1|	-	0.0011	18.3	2.9	0.0014	18.0	2.9	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-RanBP	PF00641.18	gi|288560357|ref|YP_003423843.1|	-	0.023	14.0	2.1	0.033	13.5	2.1	1.2	1	0	0	1	1	1	0	Zn-finger	in	Ran	binding	protein	and	others
RNA_POL_M_15KD	PF02150.16	gi|288560357|ref|YP_003423843.1|	-	0.45	10.4	4.8	9.8	6.2	4.6	2.3	1	1	1	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
Papilloma_E5	PF03025.14	gi|288560358|ref|YP_003423844.1|	-	0.017	15.3	7.7	0.025	14.7	7.6	1.4	1	1	0	1	1	1	0	Papillomavirus	E5
PcrB	PF01884.17	gi|288560359|ref|YP_003423845.1|	-	3e-73	246.0	0.9	3.4e-73	245.8	0.9	1.0	1	0	0	1	1	1	1	PcrB	family
His_biosynth	PF00977.21	gi|288560359|ref|YP_003423845.1|	-	0.00073	19.1	0.2	0.0024	17.4	0.1	1.8	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
Peripla_BP_4	PF13407.6	gi|288560359|ref|YP_003423845.1|	-	0.0043	16.7	2.1	0.019	14.5	0.1	2.2	2	1	0	2	2	2	1	Periplasmic	binding	protein	domain
DAGK_cat	PF00781.24	gi|288560359|ref|YP_003423845.1|	-	0.039	13.6	0.1	0.6	9.7	0.0	2.4	2	0	0	2	2	2	0	Diacylglycerol	kinase	catalytic	domain
Ribul_P_3_epim	PF00834.19	gi|288560359|ref|YP_003423845.1|	-	0.23	10.8	0.8	0.42	10.0	0.8	1.4	1	0	0	1	1	1	0	Ribulose-phosphate	3	epimerase	family
NurA	PF09376.10	gi|288560360|ref|YP_003423846.1|	-	8.3e-34	117.3	7.8	8.3e-34	117.3	7.8	1.3	2	0	0	2	2	2	1	NurA	domain
COX5A	PF02284.16	gi|288560360|ref|YP_003423846.1|	-	0.034	14.2	0.2	0.95	9.5	0.1	2.6	2	0	0	2	2	2	0	Cytochrome	c	oxidase	subunit	Va
DUF4441	PF14536.6	gi|288560360|ref|YP_003423846.1|	-	5.7	7.2	15.9	9.6	6.4	6.0	3.0	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4441)
DUF87	PF01935.17	gi|288560361|ref|YP_003423847.1|	-	2.2e-46	158.8	1.2	4.8e-46	157.7	1.2	1.6	1	0	0	1	1	1	1	Helicase	HerA,	central	domain
HAS-barrel	PF09378.10	gi|288560361|ref|YP_003423847.1|	-	1e-12	48.0	1.1	2.4e-12	46.8	1.1	1.7	1	0	0	1	1	1	1	HAS	barrel	domain
DUF853	PF05872.12	gi|288560361|ref|YP_003423847.1|	-	7.9e-08	31.3	0.0	5.5e-06	25.3	0.0	2.1	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
TrwB_AAD_bind	PF10412.9	gi|288560361|ref|YP_003423847.1|	-	0.00039	19.4	0.0	0.0013	17.7	0.0	1.8	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
FtsK_SpoIIIE	PF01580.18	gi|288560361|ref|YP_003423847.1|	-	0.0017	17.8	0.7	0.8	9.0	0.1	3.0	2	1	1	3	3	3	2	FtsK/SpoIIIE	family
ABC_tran	PF00005.27	gi|288560361|ref|YP_003423847.1|	-	0.029	14.9	0.3	0.085	13.4	0.1	2.0	2	1	0	2	2	2	0	ABC	transporter
T4SS-DNA_transf	PF02534.14	gi|288560361|ref|YP_003423847.1|	-	0.032	13.1	0.0	0.044	12.6	0.0	1.2	1	0	0	1	1	1	0	Type	IV	secretory	system	Conjugative	DNA	transfer
DUF1002	PF06207.11	gi|288560361|ref|YP_003423847.1|	-	0.036	13.6	0.7	0.08	12.5	0.7	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1002)
Metallophos	PF00149.28	gi|288560362|ref|YP_003423848.1|	-	1.4e-17	64.9	0.3	8.2e-17	62.4	0.3	2.1	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|288560362|ref|YP_003423848.1|	-	1.1e-16	61.4	0.0	2.4e-16	60.4	0.0	1.6	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
AAA_15	PF13175.6	gi|288560363|ref|YP_003423849.1|	-	9.9e-11	41.9	26.0	9.9e-11	41.9	26.0	4.2	1	1	3	4	4	3	2	AAA	ATPase	domain
AAA_23	PF13476.6	gi|288560363|ref|YP_003423849.1|	-	3.9e-10	40.6	55.8	3.9e-10	40.6	55.8	6.7	2	2	2	4	4	2	1	AAA	domain
Rad50_zn_hook	PF04423.14	gi|288560363|ref|YP_003423849.1|	-	3.5e-09	36.4	1.5	3.5e-09	36.4	1.5	6.8	7	2	2	9	9	8	1	Rad50	zinc	hook	motif
AAA_27	PF13514.6	gi|288560363|ref|YP_003423849.1|	-	1.8e-06	27.7	0.1	1.8e-06	27.7	0.1	2.9	4	0	0	4	4	4	1	AAA	domain
AAA_29	PF13555.6	gi|288560363|ref|YP_003423849.1|	-	8e-06	25.5	0.1	1.6e-05	24.5	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
SMC_N	PF02463.19	gi|288560363|ref|YP_003423849.1|	-	1.3e-05	24.7	68.2	0.00055	19.4	68.2	2.6	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
SbcCD_C	PF13558.6	gi|288560363|ref|YP_003423849.1|	-	7.7e-05	22.8	0.0	0.00021	21.5	0.0	1.7	1	0	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_21	PF13304.6	gi|288560363|ref|YP_003423849.1|	-	0.00043	20.2	37.7	0.00097	19.0	6.4	4.5	1	1	1	3	3	3	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
Trans_reg_C	PF00486.28	gi|288560363|ref|YP_003423849.1|	-	0.027	14.6	0.5	0.31	11.1	0.0	2.7	2	0	0	2	2	2	0	Transcriptional	regulatory	protein,	C	terminal
YvfG	PF09628.10	gi|288560363|ref|YP_003423849.1|	-	0.096	13.1	2.9	4.8	7.6	1.5	3.3	2	0	0	2	2	2	0	YvfG	protein
HALZ	PF02183.18	gi|288560363|ref|YP_003423849.1|	-	0.14	12.4	0.1	0.14	12.4	0.1	5.5	5	1	1	6	6	6	0	Homeobox	associated	leucine	zipper
PilN	PF05137.13	gi|288560363|ref|YP_003423849.1|	-	0.29	11.3	2.9	0.44	10.7	0.0	2.9	3	0	0	3	3	3	0	Fimbrial	assembly	protein	(PilN)
MukB	PF04310.12	gi|288560363|ref|YP_003423849.1|	-	0.3	10.9	0.1	0.3	10.9	0.1	4.7	5	1	1	6	6	6	0	MukB	N-terminal
SL4P	PF17618.2	gi|288560364|ref|YP_003423850.1|	-	0.043	13.9	0.0	0.075	13.1	0.0	1.4	1	0	0	1	1	1	0	Uncharacterized	Strongylid	L4	protein
RNase_H_2	PF13482.6	gi|288560365|ref|YP_003423851.1|	-	5e-33	114.4	0.3	1.2e-32	113.2	0.1	1.7	2	0	0	2	2	2	1	RNase_H	superfamily
DNA_pol_B_exo1	PF03104.19	gi|288560365|ref|YP_003423851.1|	-	9.6e-08	31.5	0.2	1.8e-07	30.6	0.2	1.4	1	0	0	1	1	1	1	DNA	polymerase	family	B,	exonuclease	domain
DNA_pol_B_exo2	PF10108.9	gi|288560365|ref|YP_003423851.1|	-	0.00082	19.1	0.0	0.0016	18.2	0.0	1.4	1	0	0	1	1	1	1	Predicted	3'-5'	exonuclease	related	to	the	exonuclease	domain	of	PolB
DEAD	PF00270.29	gi|288560367|ref|YP_003423853.1|	-	3.3e-26	92.1	0.0	1.4e-24	86.8	0.0	2.3	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
DUF1998	PF09369.10	gi|288560367|ref|YP_003423853.1|	-	1.4e-21	77.1	0.5	3.9e-21	75.6	0.5	1.9	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1998)
Helicase_C	PF00271.31	gi|288560367|ref|YP_003423853.1|	-	1e-10	42.0	0.5	1.2e-09	38.5	0.0	3.0	3	1	0	3	3	3	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.15	gi|288560367|ref|YP_003423853.1|	-	2.6e-08	34.1	0.3	9.8e-08	32.2	0.0	2.2	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
TPR_8	PF13181.6	gi|288560367|ref|YP_003423853.1|	-	9.6e-05	22.3	1.7	0.006	16.7	0.0	3.2	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|288560367|ref|YP_003423853.1|	-	0.00012	21.7	1.4	0.004	16.9	0.0	3.1	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|288560367|ref|YP_003423853.1|	-	0.00075	19.4	1.1	0.35	11.1	0.0	3.3	2	0	0	2	2	2	1	Tetratricopeptide	repeat
YusW	PF14039.6	gi|288560367|ref|YP_003423853.1|	-	0.0092	16.5	6.8	0.029	14.9	6.8	1.8	1	0	0	1	1	1	1	YusW-like	protein
T2SSE	PF00437.20	gi|288560367|ref|YP_003423853.1|	-	0.048	12.7	0.0	0.085	11.9	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
TPR_17	PF13431.6	gi|288560367|ref|YP_003423853.1|	-	0.051	14.0	0.5	0.24	11.9	0.0	2.5	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|288560367|ref|YP_003423853.1|	-	0.11	13.3	0.1	0.98	10.4	0.0	2.4	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_11	PF13414.6	gi|288560367|ref|YP_003423853.1|	-	0.15	11.7	4.6	0.37	10.5	0.3	2.7	2	0	0	2	2	2	0	TPR	repeat
TPR_16	PF13432.6	gi|288560367|ref|YP_003423853.1|	-	0.17	12.6	0.0	0.37	11.5	0.0	1.6	1	0	0	1	1	1	0	Tetratricopeptide	repeat
UvrD-helicase	PF00580.21	gi|288560368|ref|YP_003423854.1|	-	1.9e-46	159.0	3.1	1.9e-46	159.0	3.1	2.4	3	0	0	3	3	3	1	UvrD/REP	helicase	N-terminal	domain
AAA_19	PF13245.6	gi|288560368|ref|YP_003423854.1|	-	3.4e-22	79.3	1.5	7e-22	78.3	0.4	2.1	2	1	0	2	2	2	1	AAA	domain
UvrD_C	PF13361.6	gi|288560368|ref|YP_003423854.1|	-	2.2e-14	53.6	0.2	6.1e-08	32.4	0.0	3.7	2	1	1	3	3	3	2	UvrD-like	helicase	C-terminal	domain
UvrD_C_2	PF13538.6	gi|288560368|ref|YP_003423854.1|	-	2e-06	27.5	0.0	0.0037	17.0	0.0	2.5	2	0	0	2	2	2	2	UvrD-like	helicase	C-terminal	domain
AAA_30	PF13604.6	gi|288560368|ref|YP_003423854.1|	-	1.8e-05	24.6	0.0	0.012	15.3	0.0	2.3	2	0	0	2	2	2	2	AAA	domain
AAA_11	PF13086.6	gi|288560368|ref|YP_003423854.1|	-	0.00014	21.8	2.7	0.00018	21.4	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
Viral_helicase1	PF01443.18	gi|288560368|ref|YP_003423854.1|	-	0.012	15.4	0.3	0.96	9.1	0.0	3.4	3	1	0	4	4	4	0	Viral	(Superfamily	1)	RNA	helicase
DEAD	PF00270.29	gi|288560368|ref|YP_003423854.1|	-	0.02	14.7	0.9	0.072	12.9	0.1	2.2	1	1	0	2	2	2	0	DEAD/DEAH	box	helicase
PDDEXK_1	PF12705.7	gi|288560369|ref|YP_003423855.1|	-	2.1e-11	44.3	0.0	2.3e-05	24.4	0.0	2.5	2	0	0	2	2	2	2	PD-(D/E)XK	nuclease	superfamily
DUF169	PF02596.15	gi|288560370|ref|YP_003423856.1|	-	2.6e-58	197.4	0.0	2.9e-58	197.2	0.0	1.0	1	0	0	1	1	1	1	Uncharacterised	ArCR,	COG2043
Exo_endo_phos	PF03372.23	gi|288560371|ref|YP_003423857.1|	-	4.1e-10	39.6	0.0	7.7e-10	38.7	0.0	1.4	1	1	0	1	1	1	1	Endonuclease/Exonuclease/phosphatase	family
Exo_endo_phos_2	PF14529.6	gi|288560371|ref|YP_003423857.1|	-	3.2e-08	33.4	0.3	5.6e-08	32.6	0.1	1.5	2	0	0	2	2	2	1	Endonuclease-reverse	transcriptase
PRY	PF13765.6	gi|288560371|ref|YP_003423857.1|	-	0.11	12.1	0.0	0.23	11.1	0.0	1.5	1	0	0	1	1	1	0	SPRY-associated	domain
NTP_transf_3	PF12804.7	gi|288560372|ref|YP_003423858.1|	-	4e-13	50.0	0.0	4.8e-13	49.8	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.19	gi|288560372|ref|YP_003423858.1|	-	0.00016	21.5	0.0	0.00023	21.0	0.0	1.3	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
CTP_transf_3	PF02348.19	gi|288560372|ref|YP_003423858.1|	-	0.00062	19.7	0.3	0.0022	18.0	0.3	1.7	1	1	0	1	1	1	1	Cytidylyltransferase
MHB	PF16525.5	gi|288560373|ref|YP_003423859.1|	-	0.074	13.3	0.2	0.19	12.0	0.2	1.6	1	0	0	1	1	1	0	Haemophore,	haem-binding
DUF2208	PF09973.9	gi|288560373|ref|YP_003423859.1|	-	0.12	12.0	0.3	0.18	11.4	0.3	1.2	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2208)
Mur_ligase_M	PF08245.12	gi|288560374|ref|YP_003423860.1|	-	6.1e-22	78.6	0.1	4.4e-21	75.8	0.1	2.4	1	1	0	1	1	1	1	Mur	ligase	middle	domain
AAA_31	PF13614.6	gi|288560374|ref|YP_003423860.1|	-	5	7.0	7.6	2.7	7.9	0.5	2.7	3	0	0	3	3	3	0	AAA	domain
Peptidase_M42	PF05343.14	gi|288560375|ref|YP_003423861.1|	-	4.6e-106	354.1	0.6	5.5e-106	353.8	0.6	1.1	1	0	0	1	1	1	1	M42	glutamyl	aminopeptidase
Peptidase_M28	PF04389.17	gi|288560375|ref|YP_003423861.1|	-	0.0001	22.1	0.0	0.23	11.1	0.0	2.5	2	1	0	2	2	2	2	Peptidase	family	M28
Peptidase_M20	PF01546.28	gi|288560375|ref|YP_003423861.1|	-	0.00087	19.0	0.1	0.002	17.8	0.1	1.6	1	1	0	1	1	1	1	Peptidase	family	M20/M25/M40
Peptidase_M18	PF02127.15	gi|288560375|ref|YP_003423861.1|	-	0.013	14.4	0.1	3.2	6.4	0.0	2.4	1	1	1	2	2	2	0	Aminopeptidase	I	zinc	metalloprotease	(M18)
EnY2	PF10163.9	gi|288560375|ref|YP_003423861.1|	-	0.027	14.8	0.3	0.47	10.9	0.1	2.3	2	0	0	2	2	2	0	Transcription	factor	e(y)2
Aldo_ket_red	PF00248.21	gi|288560376|ref|YP_003423862.1|	-	4.3e-41	141.0	0.1	5.9e-40	137.3	0.1	2.1	1	1	0	1	1	1	1	Aldo/keto	reductase	family
Fer4_9	PF13187.6	gi|288560376|ref|YP_003423862.1|	-	1.1e-07	31.9	5.7	1.1e-07	31.9	5.7	1.9	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|288560376|ref|YP_003423862.1|	-	1.4e-06	28.4	4.8	0.031	14.5	2.4	2.5	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|288560376|ref|YP_003423862.1|	-	2.6e-06	27.8	5.1	6.1e-06	26.6	5.1	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|288560376|ref|YP_003423862.1|	-	3e-06	27.7	7.4	3e-06	27.7	7.4	2.1	2	0	0	2	2	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|288560376|ref|YP_003423862.1|	-	7.2e-06	26.0	6.7	9.9e-06	25.6	5.4	1.9	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|288560376|ref|YP_003423862.1|	-	0.00016	22.2	7.4	0.00021	21.8	5.8	2.1	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_20	PF14691.6	gi|288560376|ref|YP_003423862.1|	-	0.00055	19.7	9.4	0.014	15.2	0.3	2.8	1	1	1	2	2	2	2	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_16	PF13484.6	gi|288560376|ref|YP_003423862.1|	-	0.0019	19.1	10.4	0.002	19.0	8.2	2.3	2	1	0	2	2	1	1	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.6	gi|288560376|ref|YP_003423862.1|	-	0.0022	18.1	5.2	1.5	9.0	0.5	3.2	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|288560376|ref|YP_003423862.1|	-	0.0076	17.1	0.4	8.2	7.3	0.2	2.7	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|288560376|ref|YP_003423862.1|	-	0.014	15.2	14.4	0.57	10.1	2.2	2.7	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Peptidase_M16_M	PF16187.5	gi|288560376|ref|YP_003423862.1|	-	0.04	13.2	0.3	0.41	9.9	0.0	2.4	2	1	1	3	3	3	0	Middle	or	third	domain	of	peptidase_M16
Fer4_4	PF12800.7	gi|288560376|ref|YP_003423862.1|	-	0.17	12.5	15.4	0.97	10.1	3.5	3.0	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|288560376|ref|YP_003423862.1|	-	0.84	9.9	20.4	0.53	10.5	4.3	2.7	3	0	0	3	3	2	0	4Fe-4S	binding	domain
Herpes_UL49_1	PF03117.14	gi|288560376|ref|YP_003423862.1|	-	1.8	7.8	5.3	0.47	9.7	0.6	2.0	1	1	1	2	2	2	0	UL49	family
DUF4011	PF13195.6	gi|288560377|ref|YP_003423863.1|	-	5.9e-43	146.6	4.9	5.9e-43	146.6	4.9	5.6	4	1	1	5	5	3	1	Protein	of	unknown	function	(DUF4011)
MTES_1575	PF18741.1	gi|288560377|ref|YP_003423863.1|	-	2.1e-30	104.7	2.7	3.9e-30	103.9	0.1	2.9	3	0	0	3	3	3	1	REase_MTES_1575
AAA_12	PF13087.6	gi|288560377|ref|YP_003423863.1|	-	2.3e-13	50.2	0.0	2.3e-13	50.2	0.0	3.8	3	1	0	3	3	2	1	AAA	domain
DUF3320	PF11784.8	gi|288560377|ref|YP_003423863.1|	-	1.1e-10	41.3	0.0	2.7e-10	40.0	0.0	1.7	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3320)
AAA_11	PF13086.6	gi|288560377|ref|YP_003423863.1|	-	1.1e-10	41.7	0.2	6.3e-06	26.2	0.0	7.4	5	2	2	7	7	3	2	AAA	domain
AAA_30	PF13604.6	gi|288560377|ref|YP_003423863.1|	-	1.1e-07	31.7	0.1	0.00015	21.5	0.1	2.4	2	0	0	2	2	2	2	AAA	domain
AAA_19	PF13245.6	gi|288560377|ref|YP_003423863.1|	-	1.4e-07	31.9	1.1	0.0002	21.7	0.0	3.8	4	0	0	4	4	4	1	AAA	domain
IstB_IS21	PF01695.17	gi|288560377|ref|YP_003423863.1|	-	2.7e-05	24.0	0.0	6.9e-05	22.7	0.0	1.7	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
UvrD-helicase	PF00580.21	gi|288560377|ref|YP_003423863.1|	-	0.00037	20.1	0.4	0.00037	20.1	0.4	8.2	6	2	0	7	7	4	1	UvrD/REP	helicase	N-terminal	domain
Viral_helicase1	PF01443.18	gi|288560377|ref|YP_003423863.1|	-	0.0019	18.0	0.2	3.1	7.5	0.0	3.0	2	0	0	2	2	2	2	Viral	(Superfamily	1)	RNA	helicase
Helicase_RecD	PF05127.14	gi|288560377|ref|YP_003423863.1|	-	0.012	15.5	0.3	0.56	10.0	0.0	3.5	3	0	0	3	3	3	0	Helicase
AAA_16	PF13191.6	gi|288560377|ref|YP_003423863.1|	-	0.027	14.9	0.0	0.12	12.8	0.0	2.1	1	0	0	1	1	1	0	AAA	ATPase	domain
Mg_chelatase	PF01078.21	gi|288560377|ref|YP_003423863.1|	-	0.067	12.6	0.0	0.15	11.4	0.0	1.5	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
MeaB	PF03308.16	gi|288560377|ref|YP_003423863.1|	-	0.097	11.6	0.0	0.24	10.4	0.0	1.6	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
AAA_33	PF13671.6	gi|288560377|ref|YP_003423863.1|	-	0.12	12.6	0.0	0.37	10.9	0.0	1.9	1	0	0	1	1	1	0	AAA	domain
PglZ	PF08665.12	gi|288560378|ref|YP_003423864.1|	-	0.068	13.3	1.0	0.085	12.9	1.0	1.1	1	0	0	1	1	1	0	PglZ	domain
DUF4355	PF14265.6	gi|288560378|ref|YP_003423864.1|	-	2.3	8.5	12.0	0.36	11.1	8.6	1.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4355)
DUF5082	PF16888.5	gi|288560379|ref|YP_003423865.1|	-	0.041	14.2	0.8	0.14	12.4	0.3	1.8	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF5082)
Big_1	PF02369.16	gi|288560380|ref|YP_003423866.1|	-	4.2e-24	84.3	10.4	2.4e-05	24.2	0.6	7.2	6	1	1	7	7	7	5	Bacterial	Ig-like	domain	(group	1)
CarboxypepD_reg	PF13620.6	gi|288560380|ref|YP_003423866.1|	-	1.1e-20	73.6	16.2	0.00019	21.6	0.1	6.4	6	0	0	6	6	6	5	Carboxypeptidase	regulatory-like	domain
MG4	PF17789.1	gi|288560380|ref|YP_003423866.1|	-	3.9e-13	49.4	9.0	0.075	13.2	0.1	6.1	6	1	0	6	6	5	4	Macroglobulin	domain	MG4
Big_3_5	PF16640.5	gi|288560380|ref|YP_003423866.1|	-	9.3e-13	48.2	31.9	0.00028	21.0	1.7	5.8	6	0	0	6	6	6	4	Bacterial	Ig-like	domain	(group	3)
Invasin_D3	PF09134.10	gi|288560380|ref|YP_003423866.1|	-	4.4e-08	33.3	23.0	0.013	15.8	1.3	5.7	4	1	1	5	5	5	3	Invasin,	domain	3
YtkA	PF13115.6	gi|288560380|ref|YP_003423866.1|	-	9.6e-06	26.1	2.6	0.14	12.8	0.2	4.0	4	0	0	4	4	4	2	YtkA-like
SpaA	PF17802.1	gi|288560380|ref|YP_003423866.1|	-	6.2e-05	23.3	29.2	0.07	13.5	0.3	5.7	4	2	1	5	5	5	3	Prealbumin-like	fold	domain
DUF1939	PF09154.10	gi|288560380|ref|YP_003423866.1|	-	0.00027	21.0	0.0	2.9	8.1	0.0	4.2	4	0	0	4	4	4	2	Domain	of	unknown	function	(DUF1939)
CarbopepD_reg_2	PF13715.6	gi|288560380|ref|YP_003423866.1|	-	0.00049	20.1	29.0	0.041	13.9	2.7	5.4	5	0	0	5	5	5	3	CarboxypepD_reg-like	domain
bMG6	PF17962.1	gi|288560380|ref|YP_003423866.1|	-	0.0063	16.7	4.4	0.72	10.0	0.2	3.5	2	1	1	3	3	3	1	Bacterial	macroglobulin	domain	6
DUF4399	PF14347.6	gi|288560380|ref|YP_003423866.1|	-	0.036	14.4	0.0	5.7	7.4	0.0	2.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4399)
MG2	PF01835.19	gi|288560380|ref|YP_003423866.1|	-	0.071	13.6	1.3	30	5.2	0.1	4.1	3	1	1	4	4	4	0	MG2	domain
TFIIS_M	PF07500.14	gi|288560380|ref|YP_003423866.1|	-	2.4	8.7	11.3	6.6	7.2	0.1	3.8	3	1	0	3	3	3	0	Transcription	factor	S-II	(TFIIS),	central	domain
CHRD	PF07452.12	gi|288560380|ref|YP_003423866.1|	-	3.8	8.5	5.6	17	6.4	0.1	3.5	2	1	1	3	3	3	0	CHRD	domain
DHNA	PF04038.12	gi|288560380|ref|YP_003423866.1|	-	5.1	7.7	5.6	53	4.4	0.1	3.8	3	1	1	4	4	4	0	Dihydroneopterin	aldolase
DUF368	PF04018.13	gi|288560381|ref|YP_003423867.1|	-	2.7e-75	253.1	27.2	3.6e-75	252.7	27.2	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF368)
HEAT	PF02985.22	gi|288560382|ref|YP_003423868.1|	-	8.2e-11	41.2	1.4	0.0072	16.5	0.1	8.4	8	1	1	9	9	9	1	HEAT	repeat
HEAT_2	PF13646.6	gi|288560382|ref|YP_003423868.1|	-	9.3e-11	42.0	4.2	0.036	14.5	0.2	7.5	4	3	2	6	6	6	4	HEAT	repeats
Ta0938	PF11494.8	gi|288560382|ref|YP_003423868.1|	-	0.26	11.6	6.1	13	6.2	0.2	3.9	3	0	0	3	3	3	0	Ta0938
DUF2773	PF10971.8	gi|288560382|ref|YP_003423868.1|	-	0.37	11.0	4.3	37	4.5	0.0	4.8	4	1	0	5	5	5	0	Protein	of	unknown	function	(DUF2773)
Ndc1_Nup	PF09531.10	gi|288560382|ref|YP_003423868.1|	-	4.8	5.8	11.9	7	5.2	11.9	1.2	1	0	0	1	1	1	0	Nucleoporin	protein	Ndc1-Nup
UvrA_DNA-bind	PF17755.1	gi|288560383|ref|YP_003423869.1|	-	1.5e-41	141.2	0.5	6.3e-39	132.7	0.3	3.0	3	0	0	3	3	2	1	UvrA	DNA-binding	domain
UvrA_inter	PF17760.1	gi|288560383|ref|YP_003423869.1|	-	3.1e-34	117.3	0.2	8.8e-34	115.9	0.1	1.9	2	0	0	2	2	1	1	UvrA	interaction	domain
ABC_tran	PF00005.27	gi|288560383|ref|YP_003423869.1|	-	1.2e-20	74.5	0.0	1.5e-09	38.5	0.0	4.2	3	1	0	3	3	3	3	ABC	transporter
SMC_N	PF02463.19	gi|288560383|ref|YP_003423869.1|	-	3.9e-11	42.8	0.3	0.11	11.9	0.0	4.1	3	1	1	4	4	4	4	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.6	gi|288560383|ref|YP_003423869.1|	-	6.5e-08	32.2	0.2	0.014	15.1	0.1	2.6	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.6	gi|288560383|ref|YP_003423869.1|	-	5.5e-07	30.1	0.0	0.022	15.1	0.0	2.7	2	0	0	2	2	2	2	AAA	ATPase	domain
RsgA_GTPase	PF03193.16	gi|288560383|ref|YP_003423869.1|	-	7.2e-07	29.3	0.0	0.0035	17.3	0.0	2.4	2	0	0	2	2	2	2	RsgA	GTPase
ATPase_2	PF01637.18	gi|288560383|ref|YP_003423869.1|	-	4.5e-06	26.7	0.2	0.039	13.9	0.0	2.9	3	0	0	3	3	2	2	ATPase	domain	predominantly	from	Archaea
AAA_22	PF13401.6	gi|288560383|ref|YP_003423869.1|	-	1e-05	25.9	0.2	0.19	12.0	0.0	3.1	3	0	0	3	3	2	2	AAA	domain
BCA_ABC_TP_C	PF12399.8	gi|288560383|ref|YP_003423869.1|	-	6.9e-05	22.7	5.0	0.073	13.0	0.2	2.5	2	0	0	2	2	2	2	Branched-chain	amino	acid	ATP-binding	cassette	transporter
AAA_21	PF13304.6	gi|288560383|ref|YP_003423869.1|	-	0.00013	21.9	5.0	0.15	11.8	0.0	4.3	4	0	0	4	4	4	1	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_18	PF13238.6	gi|288560383|ref|YP_003423869.1|	-	0.00022	21.8	0.4	0.64	10.6	0.0	3.2	3	0	0	3	3	2	1	AAA	domain
Zn-ribbon_8	PF09723.10	gi|288560383|ref|YP_003423869.1|	-	0.00023	21.2	10.9	0.0073	16.4	0.8	4.0	4	0	0	4	4	3	1	Zinc	ribbon	domain
ATPase	PF06745.13	gi|288560383|ref|YP_003423869.1|	-	0.00026	20.4	0.1	0.66	9.3	0.1	2.5	2	0	0	2	2	2	2	KaiC
AAA_14	PF13173.6	gi|288560383|ref|YP_003423869.1|	-	0.00029	20.9	0.1	1.6	8.8	0.0	3.6	3	0	0	3	3	3	1	AAA	domain
APS_kinase	PF01583.20	gi|288560383|ref|YP_003423869.1|	-	0.00081	19.3	0.1	0.67	9.8	0.0	2.7	2	0	0	2	2	2	1	Adenylylsulphate	kinase
AAA_33	PF13671.6	gi|288560383|ref|YP_003423869.1|	-	0.0015	18.7	0.0	0.83	9.8	0.0	2.6	2	0	0	2	2	2	1	AAA	domain
AAA_23	PF13476.6	gi|288560383|ref|YP_003423869.1|	-	0.0016	19.0	5.0	0.68	10.4	0.1	3.2	3	0	0	3	3	3	2	AAA	domain
Viral_helicase1	PF01443.18	gi|288560383|ref|YP_003423869.1|	-	0.0023	17.7	0.2	0.64	9.7	0.2	2.4	2	0	0	2	2	2	1	Viral	(Superfamily	1)	RNA	helicase
cobW	PF02492.19	gi|288560383|ref|YP_003423869.1|	-	0.0024	17.5	0.8	0.65	9.6	0.2	2.4	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_25	PF13481.6	gi|288560383|ref|YP_003423869.1|	-	0.0029	17.2	0.0	0.15	11.6	0.0	2.6	2	0	0	2	2	2	1	AAA	domain
DnaJ_CXXCXGXG	PF00684.19	gi|288560383|ref|YP_003423869.1|	-	0.0029	17.9	9.0	0.28	11.6	0.2	3.7	4	0	0	4	4	3	2	DnaJ	central	domain
DUF2075	PF09848.9	gi|288560383|ref|YP_003423869.1|	-	0.0065	15.8	0.1	2.8	7.1	0.0	2.3	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_15	PF13175.6	gi|288560383|ref|YP_003423869.1|	-	0.012	15.4	4.5	0.46	10.1	0.3	3.8	3	1	1	4	4	4	0	AAA	ATPase	domain
MMR_HSR1	PF01926.23	gi|288560383|ref|YP_003423869.1|	-	0.014	15.4	0.8	1.1	9.4	0.1	2.9	3	0	0	3	3	2	0	50S	ribosome-binding	GTPase
NACHT	PF05729.12	gi|288560383|ref|YP_003423869.1|	-	0.016	15.1	0.1	4.9	7.0	0.1	2.4	2	0	0	2	2	2	0	NACHT	domain
RNA_helicase	PF00910.22	gi|288560383|ref|YP_003423869.1|	-	0.019	15.4	0.1	3.1	8.2	0.0	2.6	2	0	0	2	2	2	0	RNA	helicase
AAA_30	PF13604.6	gi|288560383|ref|YP_003423869.1|	-	0.021	14.5	0.1	28	4.4	0.0	3.2	3	0	0	3	3	3	0	AAA	domain
NB-ARC	PF00931.22	gi|288560383|ref|YP_003423869.1|	-	0.035	13.3	0.0	9.1	5.4	0.0	2.8	2	0	0	2	2	2	0	NB-ARC	domain
AAA_24	PF13479.6	gi|288560383|ref|YP_003423869.1|	-	0.04	13.6	2.3	4.6	6.9	0.0	3.3	4	0	0	4	4	3	0	AAA	domain
RNA12	PF10443.9	gi|288560383|ref|YP_003423869.1|	-	0.043	12.6	0.0	3.3	6.3	0.0	2.1	2	0	0	2	2	2	0	RNA12	protein
T2SSE	PF00437.20	gi|288560383|ref|YP_003423869.1|	-	0.068	12.2	0.2	1.2	8.2	0.0	2.3	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
MeaB	PF03308.16	gi|288560383|ref|YP_003423869.1|	-	0.076	12.0	0.2	15	4.5	0.0	2.9	3	0	0	3	3	3	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
DZR	PF12773.7	gi|288560383|ref|YP_003423869.1|	-	0.14	12.2	2.2	13	5.9	0.4	3.2	3	0	0	3	3	3	0	Double	zinc	ribbon
NTPase_1	PF03266.15	gi|288560383|ref|YP_003423869.1|	-	0.14	12.1	0.8	25	4.7	0.0	2.7	2	0	0	2	2	2	0	NTPase
DUF3987	PF13148.6	gi|288560383|ref|YP_003423869.1|	-	0.14	11.1	0.0	0.6	9.1	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3987)
HypA	PF01155.19	gi|288560383|ref|YP_003423869.1|	-	0.16	12.0	4.7	0.77	9.8	0.1	3.5	4	0	0	4	4	3	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
DNA_ligase_ZBD	PF03119.16	gi|288560383|ref|YP_003423869.1|	-	1.1	9.3	9.6	6	7.0	0.1	3.3	3	0	0	3	3	3	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Zn_Tnp_IS1595	PF12760.7	gi|288560383|ref|YP_003423869.1|	-	1.5	8.9	4.7	7.5	6.6	0.0	3.5	4	0	0	4	4	4	0	Transposase	zinc-ribbon	domain
Anti-TRAP	PF15777.5	gi|288560383|ref|YP_003423869.1|	-	2.5	8.1	9.9	19	5.3	0.0	4.0	4	0	0	4	4	3	0	Tryptophan	RNA-binding	attenuator	protein	inhibitory	protein
Peptidase_M48	PF01435.18	gi|288560384|ref|YP_003423870.1|	-	8.5e-50	169.3	0.0	1.3e-49	168.7	0.0	1.3	1	0	0	1	1	1	1	Peptidase	family	M48
EF-hand_5	PF13202.6	gi|288560384|ref|YP_003423870.1|	-	1.8e-06	27.2	0.9	2.8e-05	23.4	0.8	2.4	2	0	0	2	2	2	1	EF	hand
Peptidase_M56	PF05569.11	gi|288560384|ref|YP_003423870.1|	-	3.3e-05	23.2	0.0	5.9e-05	22.4	0.0	1.4	1	0	0	1	1	1	1	BlaR1	peptidase	M56
EF-hand_6	PF13405.6	gi|288560384|ref|YP_003423870.1|	-	0.0059	16.5	0.2	0.15	12.1	0.1	2.5	2	0	0	2	2	2	1	EF-hand	domain
EF-hand_1	PF00036.32	gi|288560384|ref|YP_003423870.1|	-	0.0078	15.7	0.1	0.13	11.9	0.1	2.4	2	0	0	2	2	2	1	EF	hand
DUF4010	PF13194.6	gi|288560384|ref|YP_003423870.1|	-	0.13	12.0	3.7	0.28	10.8	3.7	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4010)
AAA	PF00004.29	gi|288560385|ref|YP_003423871.1|	-	4.1e-12	46.7	0.2	1.3e-11	45.0	0.2	1.9	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Rad17	PF03215.15	gi|288560385|ref|YP_003423871.1|	-	1.8e-08	34.5	1.9	8.1e-08	32.4	0.1	2.6	2	1	1	3	3	3	1	Rad17	P-loop	domain
RuvB_N	PF05496.12	gi|288560385|ref|YP_003423871.1|	-	6.4e-08	32.5	0.0	2.3e-07	30.7	0.0	2.0	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_14	PF13173.6	gi|288560385|ref|YP_003423871.1|	-	1.9e-06	27.9	0.3	1.5e-05	25.0	0.0	2.6	2	1	0	2	2	2	1	AAA	domain
AAA_30	PF13604.6	gi|288560385|ref|YP_003423871.1|	-	9.3e-05	22.2	0.1	0.00049	19.9	0.0	2.2	2	1	1	3	3	3	1	AAA	domain
AAA_22	PF13401.6	gi|288560385|ref|YP_003423871.1|	-	0.00011	22.5	0.0	0.0018	18.6	0.0	2.6	1	1	1	2	2	2	1	AAA	domain
AAA_16	PF13191.6	gi|288560385|ref|YP_003423871.1|	-	0.00019	21.9	0.0	0.0005	20.5	0.0	1.8	2	0	0	2	2	1	1	AAA	ATPase	domain
DUF815	PF05673.13	gi|288560385|ref|YP_003423871.1|	-	0.00021	20.5	0.0	0.00045	19.5	0.0	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
AAA_assoc_2	PF16193.5	gi|288560385|ref|YP_003423871.1|	-	0.00027	21.2	0.1	0.001	19.3	0.1	2.1	1	0	0	1	1	1	1	AAA	C-terminal	domain
AAA_5	PF07728.14	gi|288560385|ref|YP_003423871.1|	-	0.00074	19.5	0.8	0.0055	16.7	0.0	2.8	3	0	0	3	3	3	1	AAA	domain	(dynein-related	subfamily)
RNA_helicase	PF00910.22	gi|288560385|ref|YP_003423871.1|	-	0.00076	19.8	0.5	0.0031	17.9	0.1	2.4	2	1	0	2	2	1	1	RNA	helicase
AAA_19	PF13245.6	gi|288560385|ref|YP_003423871.1|	-	0.0009	19.6	1.0	0.0074	16.6	0.3	2.7	2	1	0	2	2	2	1	AAA	domain
AAA_7	PF12775.7	gi|288560385|ref|YP_003423871.1|	-	0.0021	17.6	0.0	0.0045	16.5	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	dynein	motor	region
ResIII	PF04851.15	gi|288560385|ref|YP_003423871.1|	-	0.0022	18.0	0.0	0.0022	18.0	0.0	3.7	4	2	1	5	5	3	1	Type	III	restriction	enzyme,	res	subunit
NB-ARC	PF00931.22	gi|288560385|ref|YP_003423871.1|	-	0.0049	16.1	0.9	0.013	14.7	0.0	2.3	2	1	0	2	2	1	1	NB-ARC	domain
Parvo_NS1	PF01057.17	gi|288560385|ref|YP_003423871.1|	-	0.0052	15.9	0.0	0.011	14.8	0.0	1.5	1	0	0	1	1	1	1	Parvovirus	non-structural	protein	NS1
TniB	PF05621.11	gi|288560385|ref|YP_003423871.1|	-	0.0059	16.0	0.0	0.067	12.6	0.0	2.3	1	1	1	2	2	2	1	Bacterial	TniB	protein
DEAD	PF00270.29	gi|288560385|ref|YP_003423871.1|	-	0.012	15.4	0.6	8	6.2	0.0	3.0	2	1	1	3	3	3	0	DEAD/DEAH	box	helicase
Sigma54_activ_2	PF14532.6	gi|288560385|ref|YP_003423871.1|	-	0.015	15.4	0.0	0.032	14.3	0.0	1.6	1	0	0	1	1	1	0	Sigma-54	interaction	domain
AAA_18	PF13238.6	gi|288560385|ref|YP_003423871.1|	-	0.018	15.6	4.2	0.02	15.4	0.0	3.1	3	1	0	3	3	3	0	AAA	domain
Sigma54_activat	PF00158.26	gi|288560385|ref|YP_003423871.1|	-	0.019	14.7	0.0	0.038	13.7	0.0	1.5	1	0	0	1	1	1	0	Sigma-54	interaction	domain
PhoH	PF02562.16	gi|288560385|ref|YP_003423871.1|	-	0.022	14.2	0.0	0.11	11.9	0.0	2.1	2	0	0	2	2	2	0	PhoH-like	protein
Torsin	PF06309.11	gi|288560385|ref|YP_003423871.1|	-	0.023	14.8	0.0	0.06	13.4	0.0	1.7	1	0	0	1	1	1	0	Torsin
DNA_pol3_delta2	PF13177.6	gi|288560385|ref|YP_003423871.1|	-	0.026	14.3	2.4	2.3	8.0	0.1	3.4	2	1	0	2	2	2	0	DNA	polymerase	III,	delta	subunit
Mg_chelatase	PF01078.21	gi|288560385|ref|YP_003423871.1|	-	0.038	13.4	0.0	0.065	12.6	0.0	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
NACHT	PF05729.12	gi|288560385|ref|YP_003423871.1|	-	0.073	13.0	0.0	0.4	10.6	0.0	2.2	1	1	1	2	2	2	0	NACHT	domain
AAA_33	PF13671.6	gi|288560385|ref|YP_003423871.1|	-	0.091	12.9	0.0	0.38	10.9	0.0	2.2	1	0	0	1	1	1	0	AAA	domain
AAA_24	PF13479.6	gi|288560385|ref|YP_003423871.1|	-	0.16	11.7	6.7	0.48	10.1	1.2	3.5	3	1	0	3	3	2	0	AAA	domain
Rep_fac_C	PF08542.11	gi|288560386|ref|YP_003423872.1|	-	2.7e-17	62.9	0.0	6e-17	61.8	0.0	1.6	1	0	0	1	1	1	1	Replication	factor	C	C-terminal	domain
AAA	PF00004.29	gi|288560386|ref|YP_003423872.1|	-	4.9e-16	59.3	0.1	2e-15	57.4	0.0	1.9	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DNA_pol3_delta2	PF13177.6	gi|288560386|ref|YP_003423872.1|	-	4.9e-16	58.9	0.0	2.5e-11	43.6	0.0	2.3	1	1	1	2	2	2	2	DNA	polymerase	III,	delta	subunit
Rad17	PF03215.15	gi|288560386|ref|YP_003423872.1|	-	8.1e-08	32.4	0.0	4.4e-07	30.0	0.0	2.2	2	1	1	3	3	3	1	Rad17	P-loop	domain
AAA_14	PF13173.6	gi|288560386|ref|YP_003423872.1|	-	4.9e-07	29.8	0.0	6e-06	26.3	0.0	2.5	2	1	1	3	3	3	1	AAA	domain
AAA_16	PF13191.6	gi|288560386|ref|YP_003423872.1|	-	2.6e-06	27.9	0.0	0.00035	21.0	0.0	2.6	2	1	1	3	3	3	1	AAA	ATPase	domain
Mg_chelatase	PF01078.21	gi|288560386|ref|YP_003423872.1|	-	2.7e-06	26.9	0.1	0.0015	18.0	0.0	2.5	1	1	1	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
RuvB_N	PF05496.12	gi|288560386|ref|YP_003423872.1|	-	5e-06	26.4	0.5	5.4e-05	23.0	0.2	2.5	2	1	0	2	2	2	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
DNA_pol3_delta	PF06144.13	gi|288560386|ref|YP_003423872.1|	-	4.8e-05	23.2	0.0	8.3e-05	22.4	0.0	1.3	1	0	0	1	1	1	1	DNA	polymerase	III,	delta	subunit
AAA_24	PF13479.6	gi|288560386|ref|YP_003423872.1|	-	9.7e-05	22.2	0.0	0.00067	19.4	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_assoc_2	PF16193.5	gi|288560386|ref|YP_003423872.1|	-	0.0004	20.7	0.0	0.0013	19.0	0.0	1.9	1	0	0	1	1	1	1	AAA	C-terminal	domain
AAA_22	PF13401.6	gi|288560386|ref|YP_003423872.1|	-	0.0014	18.9	0.5	0.17	12.1	0.1	2.7	2	1	1	3	3	3	1	AAA	domain
Sigma54_activat	PF00158.26	gi|288560386|ref|YP_003423872.1|	-	0.0018	18.0	0.0	1.4	8.6	0.0	2.4	2	0	0	2	2	2	2	Sigma-54	interaction	domain
AAA_18	PF13238.6	gi|288560386|ref|YP_003423872.1|	-	0.0021	18.6	0.1	0.0087	16.6	0.0	2.0	2	1	0	2	2	2	1	AAA	domain
AAA_5	PF07728.14	gi|288560386|ref|YP_003423872.1|	-	0.0024	17.8	0.2	0.039	14.0	0.2	2.6	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
IstB_IS21	PF01695.17	gi|288560386|ref|YP_003423872.1|	-	0.0033	17.2	0.0	0.0076	16.0	0.0	1.6	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
ResIII	PF04851.15	gi|288560386|ref|YP_003423872.1|	-	0.0063	16.5	0.0	0.017	15.1	0.0	1.5	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
T2SSE	PF00437.20	gi|288560386|ref|YP_003423872.1|	-	0.0085	15.2	0.0	0.02	14.0	0.0	1.7	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_2	PF07724.14	gi|288560386|ref|YP_003423872.1|	-	0.014	15.6	0.0	0.061	13.4	0.0	2.1	1	1	0	1	1	1	0	AAA	domain	(Cdc48	subfamily)
AAA_3	PF07726.11	gi|288560386|ref|YP_003423872.1|	-	0.021	14.7	0.0	0.037	13.9	0.0	1.3	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_7	PF12775.7	gi|288560386|ref|YP_003423872.1|	-	0.023	14.2	0.0	0.055	13.0	0.0	1.6	1	1	0	1	1	1	0	P-loop	containing	dynein	motor	region
DUF815	PF05673.13	gi|288560386|ref|YP_003423872.1|	-	0.026	13.7	0.0	0.038	13.1	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
TniB	PF05621.11	gi|288560386|ref|YP_003423872.1|	-	0.045	13.2	0.0	0.65	9.4	0.0	2.4	2	0	0	2	2	2	0	Bacterial	TniB	protein
RNA_helicase	PF00910.22	gi|288560386|ref|YP_003423872.1|	-	0.061	13.7	0.0	0.2	12.1	0.0	1.9	1	0	0	1	1	1	0	RNA	helicase
AAA_25	PF13481.6	gi|288560386|ref|YP_003423872.1|	-	0.07	12.7	0.1	0.25	10.9	0.2	2.0	2	1	0	2	2	2	0	AAA	domain
RsgA_GTPase	PF03193.16	gi|288560386|ref|YP_003423872.1|	-	0.092	12.6	0.0	0.4	10.6	0.0	1.9	2	0	0	2	2	2	0	RsgA	GTPase
DZR	PF12773.7	gi|288560387|ref|YP_003423873.1|	-	9.7e-14	51.1	26.4	1.3e-10	41.1	13.3	1.8	1	1	1	2	2	2	2	Double	zinc	ribbon
zinc_ribbon_2	PF13240.6	gi|288560387|ref|YP_003423873.1|	-	7.9e-12	44.5	19.1	7.1e-06	25.6	6.6	2.7	2	0	0	2	2	2	2	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|288560387|ref|YP_003423873.1|	-	8.5e-08	31.4	15.1	0.00053	19.3	3.5	2.6	2	0	0	2	2	2	2	zinc-ribbon	domain
PMBR	PF09373.10	gi|288560387|ref|YP_003423873.1|	-	1.2e-05	25.2	0.0	0.0025	17.9	0.0	3.1	3	0	0	3	3	3	1	Pseudomurein-binding	repeat
zinc_ribbon_15	PF17032.5	gi|288560387|ref|YP_003423873.1|	-	0.0037	18.0	15.4	0.14	12.9	3.6	3.2	2	0	0	2	2	2	2	zinc-ribbon	family
LapA_dom	PF06305.11	gi|288560387|ref|YP_003423873.1|	-	0.1	12.4	0.8	0.23	11.3	0.8	1.5	1	0	0	1	1	1	0	Lipopolysaccharide	assembly	protein	A	domain
zinc-ribbons_6	PF07191.12	gi|288560387|ref|YP_003423873.1|	-	0.15	12.1	11.1	0.45	10.5	11.1	1.8	1	1	0	1	1	1	0	zinc-ribbons
TF_Zn_Ribbon	PF08271.12	gi|288560387|ref|YP_003423873.1|	-	0.4	10.2	16.0	0.062	12.8	3.6	3.0	1	1	1	2	2	2	0	TFIIB	zinc-binding
DHHC	PF01529.20	gi|288560387|ref|YP_003423873.1|	-	1.6	8.8	14.6	0.47	10.6	2.8	2.8	1	1	2	3	3	3	0	DHHC	palmitoyltransferase
Nudix_N_2	PF14803.6	gi|288560387|ref|YP_003423873.1|	-	2.1	8.3	15.9	2.3	8.2	0.4	4.0	3	1	0	3	3	3	0	Nudix	N-terminal
zf-CHY	PF05495.12	gi|288560387|ref|YP_003423873.1|	-	2.9	8.5	11.2	2.4	8.7	6.6	2.6	1	1	0	1	1	1	0	CHY	zinc	finger
NOB1_Zn_bind	PF08772.11	gi|288560387|ref|YP_003423873.1|	-	4.6	7.5	15.7	7.9	6.7	3.4	3.2	1	1	1	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
UPF0547	PF10571.9	gi|288560387|ref|YP_003423873.1|	-	6.8	6.9	11.4	0.16	12.1	0.9	2.7	2	1	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
Terminase_2	PF03592.16	gi|288560388|ref|YP_003423874.1|	-	0.038	14.4	0.4	0.08	13.4	0.3	1.4	1	1	0	1	1	1	0	Terminase	small	subunit
Peptidase_M78	PF06114.13	gi|288560389|ref|YP_003423875.1|	-	1e-17	64.2	0.1	1.6e-17	63.6	0.1	1.3	1	0	0	1	1	1	1	IrrE	N-terminal-like	domain
DUF4735	PF15882.5	gi|288560389|ref|YP_003423875.1|	-	0.001	18.6	0.0	0.0014	18.1	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4735)
HTH_3	PF01381.22	gi|288560390|ref|YP_003423876.1|	-	7.5e-13	48.3	0.0	9.6e-13	48.0	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix
HTH_31	PF13560.6	gi|288560390|ref|YP_003423876.1|	-	1.1e-11	44.8	0.0	1.5e-11	44.4	0.0	1.1	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_19	PF12844.7	gi|288560390|ref|YP_003423876.1|	-	8.8e-11	41.7	0.0	1.5e-10	40.9	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_26	PF13443.6	gi|288560390|ref|YP_003423876.1|	-	8.8e-07	29.3	0.2	1.3e-06	28.8	0.2	1.2	1	0	0	1	1	1	1	Cro/C1-type	HTH	DNA-binding	domain
HTH_37	PF13744.6	gi|288560390|ref|YP_003423876.1|	-	1.4e-06	28.1	0.0	1.9e-06	27.7	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_25	PF13413.6	gi|288560390|ref|YP_003423876.1|	-	9.5e-06	25.4	0.1	2.2e-05	24.2	0.0	1.6	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_5	PF01022.20	gi|288560390|ref|YP_003423876.1|	-	0.019	14.8	0.0	0.033	14.0	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
MarR_2	PF12802.7	gi|288560390|ref|YP_003423876.1|	-	0.027	14.3	0.0	0.048	13.5	0.0	1.4	1	0	0	1	1	1	0	MarR	family
MarR	PF01047.22	gi|288560390|ref|YP_003423876.1|	-	0.046	13.6	0.0	0.078	12.9	0.0	1.3	1	0	0	1	1	1	0	MarR	family
NUMOD1	PF07453.13	gi|288560390|ref|YP_003423876.1|	-	0.056	13.7	0.0	1.9	8.8	0.0	2.2	2	0	0	2	2	2	0	NUMOD1	domain
Sigma70_r4	PF04545.16	gi|288560390|ref|YP_003423876.1|	-	0.079	12.5	0.1	0.88	9.1	0.0	2.3	3	0	0	3	3	3	0	Sigma-70,	region	4
YdaS_antitoxin	PF15943.5	gi|288560390|ref|YP_003423876.1|	-	0.12	12.3	0.0	0.17	11.8	0.0	1.3	1	0	0	1	1	1	0	Putative	antitoxin	of	bacterial	toxin-antitoxin	system,	YdaS/YdaT
Mrr_N	PF14338.6	gi|288560391|ref|YP_003423877.1|	-	4.4e-21	74.8	1.2	1.4e-20	73.2	0.0	2.3	2	1	0	2	2	2	1	Mrr	N-terminal	domain
SHOCT	PF09851.9	gi|288560391|ref|YP_003423877.1|	-	1.2e-05	24.8	7.8	1.2e-05	24.8	7.8	2.2	2	0	0	2	2	2	1	Short	C-terminal	domain
pXO2-72	PF17443.2	gi|288560391|ref|YP_003423877.1|	-	0.0012	19.0	0.4	0.0033	17.6	0.3	1.9	1	1	0	1	1	1	1	Uncharacterized	protein	pXO2-72
GvpG	PF05120.12	gi|288560391|ref|YP_003423877.1|	-	0.25	11.4	2.7	0.23	11.5	0.5	2.0	2	0	0	2	2	2	0	Gas	vesicle	protein	G
Zip	PF02535.22	gi|288560391|ref|YP_003423877.1|	-	2.4	7.3	4.4	2.8	7.1	4.4	1.1	1	0	0	1	1	1	0	ZIP	Zinc	transporter
TPR_1	PF00515.28	gi|288560392|ref|YP_003423878.1|	-	0.00087	19.0	7.9	0.055	13.3	0.2	3.5	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|288560392|ref|YP_003423878.1|	-	0.0013	19.2	0.3	0.014	16.0	0.0	2.7	2	0	0	2	2	2	1	Tetratricopeptide	repeat
SPOB_a	PF14689.6	gi|288560392|ref|YP_003423878.1|	-	0.0013	18.4	2.1	1.4	8.7	0.1	3.5	3	0	0	3	3	3	2	Sensor_kinase_SpoOB-type,	alpha-helical	domain
TPR_12	PF13424.6	gi|288560392|ref|YP_003423878.1|	-	0.0039	17.5	2.3	1.2	9.5	0.2	3.4	3	1	0	3	3	3	1	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|288560392|ref|YP_003423878.1|	-	0.014	16.0	0.3	5.1	7.8	0.0	2.8	2	1	0	2	2	2	0	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|288560392|ref|YP_003423878.1|	-	0.022	14.9	11.4	0.07	13.3	0.1	4.4	4	1	0	4	4	4	0	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|288560392|ref|YP_003423878.1|	-	0.027	14.7	0.8	0.027	14.7	0.8	4.7	4	0	0	4	4	4	0	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|288560392|ref|YP_003423878.1|	-	0.059	13.9	0.0	0.14	12.7	0.0	1.7	1	0	0	1	1	1	0	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|288560392|ref|YP_003423878.1|	-	0.082	13.8	0.0	2.2	9.3	0.0	3.3	3	1	1	4	4	4	0	Tetratricopeptide	repeat
Fis1_TPR_C	PF14853.6	gi|288560392|ref|YP_003423878.1|	-	0.18	11.9	3.1	1.8	8.7	0.1	3.3	3	0	0	3	3	3	0	Fis1	C-terminal	tetratricopeptide	repeat
SapB_1	PF05184.15	gi|288560393|ref|YP_003423879.1|	-	2.4	8.2	4.9	19	5.4	0.2	3.1	3	0	0	3	3	3	0	Saposin-like	type	B,	region	1
UvrD-helicase	PF00580.21	gi|288560394|ref|YP_003423880.1|	-	1e-50	173.1	9.1	1e-50	173.1	9.1	6.3	3	3	0	5	5	4	1	UvrD/REP	helicase	N-terminal	domain
UvrD_C	PF13361.6	gi|288560394|ref|YP_003423880.1|	-	6.4e-43	147.5	4.9	6.4e-43	147.5	4.9	5.5	4	2	0	4	4	3	2	UvrD-like	helicase	C-terminal	domain
PDDEXK_1	PF12705.7	gi|288560394|ref|YP_003423880.1|	-	1e-28	101.0	0.5	4.2e-28	98.9	0.5	2.2	1	0	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
AAA_19	PF13245.6	gi|288560394|ref|YP_003423880.1|	-	4.3e-28	98.5	0.0	5.5e-27	94.9	0.0	2.8	2	1	0	2	2	2	1	AAA	domain
UvrD_C_2	PF13538.6	gi|288560394|ref|YP_003423880.1|	-	5.6e-10	38.9	0.0	0.00011	22.0	0.0	2.6	2	0	0	2	2	2	2	UvrD-like	helicase	C-terminal	domain
AAA_12	PF13087.6	gi|288560394|ref|YP_003423880.1|	-	9e-07	28.7	12.2	0.0092	15.6	2.3	4.5	4	0	0	4	4	4	3	AAA	domain
AAA_11	PF13086.6	gi|288560394|ref|YP_003423880.1|	-	5.3e-06	26.4	0.0	5.3e-06	26.4	0.0	4.4	4	1	0	4	4	3	1	AAA	domain
AAA_30	PF13604.6	gi|288560394|ref|YP_003423880.1|	-	0.0003	20.6	0.0	0.00062	19.5	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
Viral_helicase1	PF01443.18	gi|288560394|ref|YP_003423880.1|	-	0.00086	19.1	0.0	2.8	7.6	0.0	3.6	2	1	1	3	3	3	1	Viral	(Superfamily	1)	RNA	helicase
ResIII	PF04851.15	gi|288560394|ref|YP_003423880.1|	-	0.015	15.3	0.1	0.015	15.3	0.1	4.6	4	1	0	4	4	4	0	Type	III	restriction	enzyme,	res	subunit
DUF948	PF06103.11	gi|288560394|ref|YP_003423880.1|	-	0.08	13.2	3.2	5	7.4	0.2	2.9	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
VATC	PF18716.1	gi|288560394|ref|YP_003423880.1|	-	8	6.4	7.2	1.7	8.6	2.5	2.2	2	0	0	2	2	2	0	Vms1-associating	treble	clef	domain
PhosphMutase	PF10143.9	gi|288560395|ref|YP_003423881.1|	-	3e-55	186.7	0.0	4.1e-55	186.2	0.0	1.2	1	0	0	1	1	1	1	2,3-bisphosphoglycerate-independent	phosphoglycerate	mutase
Metalloenzyme	PF01676.18	gi|288560395|ref|YP_003423881.1|	-	5.9e-38	130.6	0.0	6.7e-38	130.5	0.0	1.0	1	0	0	1	1	1	1	Metalloenzyme	superfamily
Homoserine_dh	PF00742.19	gi|288560396|ref|YP_003423882.1|	-	8.7e-54	182.0	0.7	1.4e-53	181.3	0.7	1.4	1	0	0	1	1	1	1	Homoserine	dehydrogenase
NAD_binding_3	PF03447.16	gi|288560396|ref|YP_003423882.1|	-	1.3e-10	41.9	0.0	3.5e-10	40.6	0.0	1.7	1	0	0	1	1	1	1	Homoserine	dehydrogenase,	NAD	binding	domain
ELFV_dehydrog	PF00208.21	gi|288560396|ref|YP_003423882.1|	-	2e-06	27.8	0.8	4.2e-06	26.7	0.3	1.8	2	0	0	2	2	2	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
ACT	PF01842.25	gi|288560397|ref|YP_003423883.1|	-	0.00048	19.8	0.7	0.0011	18.7	0.2	1.8	1	1	1	2	2	2	1	ACT	domain
Glu-tRNAGln	PF02686.15	gi|288560398|ref|YP_003423884.1|	-	0.022	15.1	1.0	0.034	14.4	1.0	1.3	1	1	0	1	1	1	0	Glu-tRNAGln	amidotransferase	C	subunit
Asn_synthase	PF00733.21	gi|288560399|ref|YP_003423885.1|	-	1.1e-49	170.0	0.0	5.3e-47	161.2	0.0	2.1	1	1	0	1	1	1	1	Asparagine	synthase
GATase_7	PF13537.6	gi|288560399|ref|YP_003423885.1|	-	5.3e-26	91.0	0.0	9.6e-26	90.1	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_6	PF13522.6	gi|288560399|ref|YP_003423885.1|	-	7.3e-22	78.0	0.0	3.7e-21	75.7	0.0	2.1	2	0	0	2	2	2	1	Glutamine	amidotransferase	domain
DUF3700	PF12481.8	gi|288560399|ref|YP_003423885.1|	-	0.00014	21.4	0.5	0.00047	19.7	0.5	1.8	1	1	0	1	1	1	1	Aluminium	induced	protein
BAR	PF03114.18	gi|288560399|ref|YP_003423885.1|	-	0.074	12.7	0.4	0.31	10.7	0.1	2.0	2	0	0	2	2	2	0	BAR	domain
UPF0270	PF06794.12	gi|288560399|ref|YP_003423885.1|	-	0.11	12.5	0.0	0.34	11.0	0.0	1.8	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0270)
TM2	PF05154.16	gi|288560400|ref|YP_003423886.1|	-	6.5	7.2	17.5	15	6.0	10.7	2.9	2	1	0	2	2	2	0	TM2	domain
TelA	PF05816.11	gi|288560401|ref|YP_003423887.1|	-	2e-65	221.0	15.1	2e-65	221.0	15.1	1.5	2	0	0	2	2	2	1	Toxic	anion	resistance	protein	(TelA)
Blt1	PF12754.7	gi|288560401|ref|YP_003423887.1|	-	0.15	12.4	4.7	8.1	6.7	0.2	2.6	2	0	0	2	2	2	0	Blt1	N-terminal	domain
PAP_central	PF04928.17	gi|288560401|ref|YP_003423887.1|	-	0.86	8.5	6.0	0.22	10.5	1.7	2.1	2	0	0	2	2	2	0	Poly(A)	polymerase	central	domain
bZIP_1	PF00170.21	gi|288560401|ref|YP_003423887.1|	-	8.6	6.5	6.8	2	8.6	1.2	2.9	2	1	0	2	2	2	0	bZIP	transcription	factor
zinc_ribbon_2	PF13240.6	gi|288560403|ref|YP_003423889.1|	-	1.8e-05	24.3	2.2	3.6e-05	23.3	2.2	1.5	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|288560403|ref|YP_003423889.1|	-	6e-05	22.3	4.1	0.00016	21.0	4.1	1.7	1	1	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|288560403|ref|YP_003423889.1|	-	0.00032	20.6	0.9	0.00059	19.8	0.9	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc-ribbon_6	PF10005.9	gi|288560403|ref|YP_003423889.1|	-	0.00058	20.5	0.1	0.00094	19.8	0.1	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
Focal_AT	PF03623.13	gi|288560403|ref|YP_003423889.1|	-	0.0059	16.6	2.0	0.013	15.5	2.0	1.5	1	0	0	1	1	1	1	Focal	adhesion	targeting	region
DUF2116	PF09889.9	gi|288560403|ref|YP_003423889.1|	-	0.019	14.9	0.6	0.049	13.6	0.6	1.7	1	0	0	1	1	1	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
Prok-RING_1	PF14446.6	gi|288560403|ref|YP_003423889.1|	-	0.023	14.6	0.9	0.046	13.6	0.9	1.4	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
zinc_ribbon_15	PF17032.5	gi|288560403|ref|YP_003423889.1|	-	0.034	14.9	2.6	0.071	13.9	2.6	1.6	1	0	0	1	1	1	0	zinc-ribbon	family
OmpH	PF03938.14	gi|288560403|ref|YP_003423889.1|	-	0.059	13.7	2.1	2.9	8.2	0.1	2.2	2	0	0	2	2	2	0	Outer	membrane	protein	(OmpH-like)
DUF3800	PF12686.7	gi|288560403|ref|YP_003423889.1|	-	0.069	13.8	0.0	0.12	13.0	0.0	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3800)
TMF_TATA_bd	PF12325.8	gi|288560403|ref|YP_003423889.1|	-	0.11	12.8	8.3	0.095	12.9	3.4	2.1	2	0	0	2	2	2	0	TATA	element	modulatory	factor	1	TATA	binding
LXG	PF04740.12	gi|288560403|ref|YP_003423889.1|	-	0.22	11.2	5.5	1.1	8.9	5.7	1.8	1	1	1	2	2	2	0	LXG	domain	of	WXG	superfamily
DUF4187	PF13821.6	gi|288560403|ref|YP_003423889.1|	-	0.43	10.4	5.4	0.32	10.8	3.2	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4187)
FdhE	PF04216.12	gi|288560403|ref|YP_003423889.1|	-	0.47	10.3	1.5	0.95	9.3	0.3	1.9	2	1	0	2	2	2	0	Protein	involved	in	formate	dehydrogenase	formation
zf-RING_7	PF02591.15	gi|288560403|ref|YP_003423889.1|	-	1.1	9.5	4.7	2.7	8.3	0.6	2.8	2	1	0	2	2	2	0	C4-type	zinc	ribbon	domain
A2L_zn_ribbon	PF08792.10	gi|288560403|ref|YP_003423889.1|	-	4.5	7.1	7.2	62	3.5	7.2	2.2	1	1	0	1	1	1	0	A2L	zinc	ribbon	domain
Cys_Met_Meta_PP	PF01053.20	gi|288560404|ref|YP_003423890.1|	-	1.1e-135	452.1	0.0	1.3e-135	451.9	0.0	1.0	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
DegT_DnrJ_EryC1	PF01041.17	gi|288560404|ref|YP_003423890.1|	-	2.2e-10	40.4	0.2	3.9e-10	39.6	0.2	1.3	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_5	PF00266.19	gi|288560404|ref|YP_003423890.1|	-	9e-09	34.7	0.3	1.6e-08	33.9	0.3	1.3	1	0	0	1	1	1	1	Aminotransferase	class-V
Aminotran_1_2	PF00155.21	gi|288560404|ref|YP_003423890.1|	-	2.2e-06	27.1	0.1	3.4e-06	26.5	0.1	1.3	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
GDC-P	PF02347.16	gi|288560404|ref|YP_003423890.1|	-	0.00024	20.1	0.0	0.00042	19.3	0.0	1.3	1	0	0	1	1	1	1	Glycine	cleavage	system	P-protein
Met_gamma_lyase	PF06838.11	gi|288560404|ref|YP_003423890.1|	-	0.081	11.4	0.9	0.16	10.5	0.9	1.5	1	1	0	1	1	1	0	Methionine	gamma-lyase
Beta_elim_lyase	PF01212.21	gi|288560404|ref|YP_003423890.1|	-	0.12	11.6	0.0	0.75	9.0	0.0	2.1	1	1	0	1	1	1	0	Beta-eliminating	lyase
EcoEI_R_C	PF08463.10	gi|288560405|ref|YP_003423891.1|	-	0.045	13.9	0.0	0.076	13.1	0.0	1.4	1	0	0	1	1	1	0	EcoEI	R	protein	C-terminal
zinc_ribbon_2	PF13240.6	gi|288560406|ref|YP_003423892.1|	-	2.5e-07	30.2	4.4	5.1e-07	29.2	4.4	1.6	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|288560406|ref|YP_003423892.1|	-	2.8e-07	29.7	2.7	5.1e-07	28.9	2.7	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|288560406|ref|YP_003423892.1|	-	5.4e-05	23.1	1.4	9.1e-05	22.4	1.4	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_15	PF17032.5	gi|288560406|ref|YP_003423892.1|	-	0.002	18.8	0.1	0.0047	17.6	0.1	1.7	1	0	0	1	1	1	1	zinc-ribbon	family
Sdh5	PF03937.16	gi|288560406|ref|YP_003423892.1|	-	0.097	12.6	7.0	2.2	8.3	0.0	4.3	4	0	0	4	4	4	0	Flavinator	of	succinate	dehydrogenase
TF_Zn_Ribbon	PF08271.12	gi|288560406|ref|YP_003423892.1|	-	0.1	12.1	0.9	0.3	10.6	0.9	1.8	1	0	0	1	1	1	0	TFIIB	zinc-binding
Nudix_N_2	PF14803.6	gi|288560406|ref|YP_003423892.1|	-	0.13	12.3	0.4	0.81	9.7	0.0	2.3	2	0	0	2	2	2	0	Nudix	N-terminal
Cys_rich_CPXG	PF14255.6	gi|288560406|ref|YP_003423892.1|	-	0.23	11.4	1.4	3.9	7.4	0.1	2.8	2	0	0	2	2	2	0	Cysteine-rich	CPXCG
RraB	PF06877.11	gi|288560406|ref|YP_003423892.1|	-	0.24	12.2	8.2	1	10.1	2.9	3.9	2	1	2	4	4	4	0	Regulator	of	ribonuclease	activity	B
UPF0547	PF10571.9	gi|288560406|ref|YP_003423892.1|	-	0.28	11.3	1.1	0.49	10.5	1.1	1.3	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
BUD22	PF09073.10	gi|288560406|ref|YP_003423892.1|	-	2	7.7	18.8	3.2	7.0	18.8	1.4	1	0	0	1	1	1	0	BUD22
HEPN	PF05168.14	gi|288560410|ref|YP_003423896.1|	-	0.045	13.9	1.0	0.063	13.4	1.0	1.3	1	1	0	1	1	1	0	HEPN	domain
PIF1	PF05970.14	gi|288560413|ref|YP_003423899.1|	-	1.6e-23	83.5	0.0	6.8e-20	71.5	0.0	2.2	1	1	1	2	2	2	2	PIF1-like	helicase
AAA_30	PF13604.6	gi|288560413|ref|YP_003423899.1|	-	1.8e-15	57.1	0.0	4.6e-15	55.8	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_19	PF13245.6	gi|288560413|ref|YP_003423899.1|	-	1.1e-10	42.0	0.0	2e-08	34.7	0.0	3.5	2	2	0	2	2	2	1	AAA	domain
Viral_helicase1	PF01443.18	gi|288560413|ref|YP_003423899.1|	-	1.1e-07	31.9	0.0	0.014	15.2	0.0	3.1	2	1	0	2	2	2	2	Viral	(Superfamily	1)	RNA	helicase
AAA_11	PF13086.6	gi|288560413|ref|YP_003423899.1|	-	2.2e-07	30.9	0.0	0.03	14.1	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
AAA_22	PF13401.6	gi|288560413|ref|YP_003423899.1|	-	2.3e-07	31.2	0.1	8.7e-06	26.1	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
TsaE	PF02367.17	gi|288560413|ref|YP_003423899.1|	-	0.00012	22.0	0.2	0.00041	20.3	0.0	2.0	2	0	0	2	2	1	1	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
UvrD_C_2	PF13538.6	gi|288560413|ref|YP_003423899.1|	-	0.00014	21.6	0.0	0.00032	20.5	0.0	1.6	1	0	0	1	1	1	1	UvrD-like	helicase	C-terminal	domain
ATPase_2	PF01637.18	gi|288560413|ref|YP_003423899.1|	-	0.0003	20.8	0.1	0.0016	18.4	0.1	2.2	1	1	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
Herpes_Helicase	PF02689.14	gi|288560413|ref|YP_003423899.1|	-	0.0048	14.9	0.1	0.061	11.2	0.0	2.4	3	0	0	3	3	3	1	Helicase
AAA_16	PF13191.6	gi|288560413|ref|YP_003423899.1|	-	0.0066	16.8	0.0	0.021	15.2	0.0	1.8	1	0	0	1	1	1	1	AAA	ATPase	domain
DUF3848	PF12959.7	gi|288560413|ref|YP_003423899.1|	-	0.011	15.8	0.1	0.17	11.9	0.0	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3848)
NACHT	PF05729.12	gi|288560413|ref|YP_003423899.1|	-	0.012	15.5	0.0	0.027	14.4	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
AAA_24	PF13479.6	gi|288560413|ref|YP_003423899.1|	-	0.013	15.2	0.0	0.042	13.6	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
PhoH	PF02562.16	gi|288560413|ref|YP_003423899.1|	-	0.015	14.7	0.2	0.12	11.8	0.0	2.3	2	1	0	2	2	2	0	PhoH-like	protein
KAP_NTPase	PF07693.14	gi|288560413|ref|YP_003423899.1|	-	0.018	14.3	0.0	0.036	13.3	0.0	1.4	1	0	0	1	1	1	0	KAP	family	P-loop	domain
AAA_5	PF07728.14	gi|288560413|ref|YP_003423899.1|	-	0.03	14.3	0.4	0.4	10.7	0.4	2.4	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
RNA_helicase	PF00910.22	gi|288560413|ref|YP_003423899.1|	-	0.038	14.4	0.1	0.22	11.9	0.1	2.3	1	1	0	1	1	1	0	RNA	helicase
cobW	PF02492.19	gi|288560413|ref|YP_003423899.1|	-	0.069	12.7	0.1	0.23	11.0	0.0	2.0	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
DUF2075	PF09848.9	gi|288560413|ref|YP_003423899.1|	-	0.11	11.7	0.0	0.21	10.8	0.0	1.5	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_15	PF13175.6	gi|288560414|ref|YP_003423900.1|	-	1.7e-35	123.5	29.8	1.7e-35	123.5	29.8	2.1	2	1	0	2	2	2	1	AAA	ATPase	domain
AAA_21	PF13304.6	gi|288560414|ref|YP_003423900.1|	-	6.9e-22	78.6	6.6	1.8e-21	77.2	6.6	1.7	1	1	0	1	1	1	1	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|288560414|ref|YP_003423900.1|	-	8.3e-12	45.0	13.0	4.3e-10	39.4	13.0	2.4	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.6	gi|288560414|ref|YP_003423900.1|	-	1.3e-11	45.4	20.8	1.3e-11	45.4	20.8	3.0	1	1	1	2	2	2	1	AAA	domain
DUF2813	PF11398.8	gi|288560414|ref|YP_003423900.1|	-	9e-06	25.2	10.2	6.1e-05	22.4	0.1	3.2	5	0	0	5	5	5	2	Protein	of	unknown	function	(DUF2813)
AAA_27	PF13514.6	gi|288560414|ref|YP_003423900.1|	-	0.00016	21.3	0.0	0.00037	20.1	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_29	PF13555.6	gi|288560414|ref|YP_003423900.1|	-	0.0003	20.4	0.0	0.00054	19.7	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
rve_2	PF13333.6	gi|288560414|ref|YP_003423900.1|	-	0.026	14.7	0.8	0.14	12.4	0.8	2.3	1	0	0	1	1	1	0	Integrase	core	domain
ABC_tran	PF00005.27	gi|288560414|ref|YP_003423900.1|	-	0.5	10.9	4.8	1.6	9.2	1.4	3.0	2	1	0	2	2	2	0	ABC	transporter
Peptidase_M78	PF06114.13	gi|288560415|ref|YP_003423901.1|	-	3.4e-15	56.1	0.0	5.7e-15	55.3	0.0	1.4	1	0	0	1	1	1	1	IrrE	N-terminal-like	domain
DUF1719	PF08224.11	gi|288560415|ref|YP_003423901.1|	-	0.051	12.7	0.0	0.081	12.0	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1719)
DUF285	PF03382.14	gi|288560415|ref|YP_003423901.1|	-	0.19	11.5	1.2	0.46	10.2	0.1	1.9	2	1	0	2	2	2	0	Mycoplasma	protein	of	unknown	function,	DUF285
HTH_3	PF01381.22	gi|288560416|ref|YP_003423902.1|	-	3.3e-12	46.3	0.1	1.1e-11	44.5	0.1	1.8	2	0	0	2	2	2	1	Helix-turn-helix
HTH_19	PF12844.7	gi|288560416|ref|YP_003423902.1|	-	8.2e-11	41.8	1.6	1.7e-08	34.3	0.4	2.1	2	0	0	2	2	2	2	Helix-turn-helix	domain
HTH_31	PF13560.6	gi|288560416|ref|YP_003423902.1|	-	7.7e-06	26.2	0.0	1.3e-05	25.5	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_26	PF13443.6	gi|288560416|ref|YP_003423902.1|	-	3.6e-05	24.1	0.1	0.00011	22.5	0.1	1.7	2	0	0	2	2	2	1	Cro/C1-type	HTH	DNA-binding	domain
HTH_25	PF13413.6	gi|288560416|ref|YP_003423902.1|	-	0.0028	17.5	0.1	0.087	12.7	0.0	2.3	2	1	0	2	2	2	1	Helix-turn-helix	domain
Sigma70_r4	PF04545.16	gi|288560416|ref|YP_003423902.1|	-	0.016	14.7	0.0	0.16	11.5	0.0	2.2	2	0	0	2	2	2	0	Sigma-70,	region	4
Tox-HDC	PF15656.6	gi|288560416|ref|YP_003423902.1|	-	0.074	13.2	0.3	0.092	12.9	0.3	1.2	1	0	0	1	1	1	0	Toxin	with	a	H,	D/N	and	C	signature
DDE_Tnp_1_6	PF13751.6	gi|288560418|ref|YP_003423904.1|	-	1.2e-19	70.8	1.1	5.1e-19	68.7	0.5	2.1	2	0	0	2	2	2	1	Transposase	DDE	domain
DDE_Tnp_1	PF01609.21	gi|288560418|ref|YP_003423904.1|	-	1.2e-11	44.6	0.8	7.4e-11	42.1	0.8	2.0	1	1	0	1	1	1	1	Transposase	DDE	domain
DUF772	PF05598.11	gi|288560418|ref|YP_003423904.1|	-	4.3e-06	26.7	0.0	1.1e-05	25.3	0.0	1.7	1	0	0	1	1	1	1	Transposase	domain	(DUF772)
GET2	PF08690.10	gi|288560419|ref|YP_003423905.1|	-	6.9	6.2	8.3	0.24	11.1	0.4	2.0	2	0	0	2	2	2	0	GET	complex	subunit	GET2
zinc_ribbon_2	PF13240.6	gi|288560420|ref|YP_003423906.1|	-	0.00044	19.9	5.2	0.001	18.7	5.2	1.7	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|288560420|ref|YP_003423906.1|	-	0.00074	19.5	1.5	0.0013	18.7	1.5	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-RRPl_C4	PF17026.5	gi|288560420|ref|YP_003423906.1|	-	0.0017	18.4	3.0	0.0017	18.4	3.0	2.3	2	0	0	2	2	2	1	Putative	ribonucleoprotein	zinc-finger	pf	C4	type
zf-ribbon_3	PF13248.6	gi|288560420|ref|YP_003423906.1|	-	0.029	13.8	2.8	0.051	13.0	2.8	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
DUF4215	PF13948.6	gi|288560420|ref|YP_003423906.1|	-	0.33	11.4	5.6	0.86	10.1	5.6	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4215)
zf-FCS	PF06467.14	gi|288560420|ref|YP_003423906.1|	-	0.39	10.7	4.9	4.8	7.2	0.8	2.7	1	1	1	2	2	2	0	MYM-type	Zinc	finger	with	FCS	sequence	motif
zinc_ribbon_15	PF17032.5	gi|288560420|ref|YP_003423906.1|	-	0.68	10.7	5.3	1.9	9.3	5.3	1.9	1	0	0	1	1	1	0	zinc-ribbon	family
BsuBI_PstI_RE	PF06616.11	gi|288560422|ref|YP_003423908.1|	-	2.7e-62	208.6	0.4	5.3e-62	207.7	0.4	1.5	1	0	0	1	1	1	1	BsuBI/PstI	restriction	endonuclease	domain
BsuBI_PstI_RE_N	PF17728.1	gi|288560422|ref|YP_003423908.1|	-	4.5e-43	146.5	0.2	6.9e-43	145.9	0.2	1.3	1	0	0	1	1	1	1	BsuBI/PstI	restriction	endonuclease	HTH	domain
HSDR_N_2	PF13588.6	gi|288560422|ref|YP_003423908.1|	-	0.17	11.9	0.8	0.45	10.5	0.1	2.0	2	1	0	2	2	2	0	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
N6_Mtase	PF02384.16	gi|288560423|ref|YP_003423909.1|	-	5.8e-14	52.1	0.8	5.8e-14	52.1	0.8	1.8	2	0	0	2	2	2	1	N-6	DNA	Methylase
Eco57I	PF07669.11	gi|288560423|ref|YP_003423909.1|	-	2.4e-13	50.5	2.4	5.6e-13	49.3	0.4	2.5	2	0	0	2	2	2	1	Eco57I	restriction-modification	methylase
MTS	PF05175.14	gi|288560423|ref|YP_003423909.1|	-	6.4e-05	22.6	0.1	0.00032	20.3	0.1	2.0	1	1	0	1	1	1	1	Methyltransferase	small	domain
Pkinase	PF00069.25	gi|288560424|ref|YP_003423910.1|	-	1e-32	113.6	0.1	2e-32	112.6	0.1	1.4	1	0	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.17	gi|288560424|ref|YP_003423910.1|	-	3.2e-30	105.3	0.0	5e-30	104.6	0.0	1.2	1	0	0	1	1	1	1	Protein	tyrosine	kinase
TPR_8	PF13181.6	gi|288560424|ref|YP_003423910.1|	-	1.2e-25	87.5	53.1	3.3e-06	26.9	0.9	10.1	10	0	0	10	10	10	7	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|288560424|ref|YP_003423910.1|	-	5.7e-21	73.4	66.6	1.3e-07	31.1	1.6	10.5	11	0	0	11	11	11	7	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|288560424|ref|YP_003423910.1|	-	2.3e-20	71.0	47.0	1.2e-05	25.0	0.7	11.1	11	1	0	11	11	11	6	Tetratricopeptide	repeat
TPR_11	PF13414.6	gi|288560424|ref|YP_003423910.1|	-	2.9e-15	55.6	31.9	3.2e-08	33.1	5.6	7.0	6	1	1	7	7	7	3	TPR	repeat
TPR_19	PF14559.6	gi|288560424|ref|YP_003423910.1|	-	6.5e-15	55.4	2.6	0.0011	19.5	0.0	5.8	4	2	2	6	6	6	3	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|288560424|ref|YP_003423910.1|	-	1.4e-13	50.9	16.5	1.8e-05	24.9	2.2	7.7	5	2	3	8	8	8	4	Tetratricopeptide	repeat
TPR_17	PF13431.6	gi|288560424|ref|YP_003423910.1|	-	1e-12	47.5	29.4	0.0014	18.9	1.4	8.2	8	0	0	8	8	8	4	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|288560424|ref|YP_003423910.1|	-	4.9e-11	42.5	0.0	2.6	9.1	0.0	7.9	5	4	5	10	10	10	3	Tetratricopeptide	repeat
TPR_7	PF13176.6	gi|288560424|ref|YP_003423910.1|	-	4.6e-09	35.7	16.6	0.0033	17.3	0.1	7.3	9	0	0	9	9	7	3	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|288560424|ref|YP_003423910.1|	-	2.3e-06	28.2	0.0	0.004	17.8	0.0	4.2	5	0	0	5	5	5	1	Tetratricopeptide	repeat
TPR_20	PF14561.6	gi|288560424|ref|YP_003423910.1|	-	0.00054	20.2	0.5	0.66	10.3	0.0	4.0	3	1	1	4	4	4	1	Tetratricopeptide	repeat
TPR_10	PF13374.6	gi|288560424|ref|YP_003423910.1|	-	0.0012	18.6	16.1	0.28	11.1	0.0	5.8	5	1	1	6	6	5	2	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|288560424|ref|YP_003423910.1|	-	0.0015	19.1	11.0	2.7	8.8	0.1	6.3	6	0	0	6	6	6	2	Tetratricopeptide	repeat
TOM20_plant	PF06552.12	gi|288560424|ref|YP_003423910.1|	-	0.0071	16.1	1.6	4.4	7.0	0.1	3.7	3	1	0	3	3	3	1	Plant	specific	mitochondrial	import	receptor	subunit	TOM20
TPR_9	PF13371.6	gi|288560424|ref|YP_003423910.1|	-	0.0098	16.0	0.0	4.7	7.4	0.0	3.9	4	1	1	5	5	5	1	Tetratricopeptide	repeat
TPR_15	PF13429.6	gi|288560424|ref|YP_003423910.1|	-	0.015	14.5	0.0	0.19	10.9	0.0	2.4	2	1	1	3	3	3	0	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|288560424|ref|YP_003423910.1|	-	0.017	15.4	0.1	0.017	15.4	0.1	4.8	4	1	1	5	5	5	0	Anaphase-promoting	complex,	cyclosome,	subunit	3
DUF627	PF04781.12	gi|288560424|ref|YP_003423910.1|	-	0.066	13.2	0.3	2.5	8.2	0.1	2.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF627)
TPR_MalT	PF17874.1	gi|288560424|ref|YP_003423910.1|	-	0.083	12.3	0.0	5.7	6.2	0.0	2.5	2	1	1	3	3	3	0	MalT-like	TPR	region
NdhM	PF10664.9	gi|288560425|ref|YP_003423911.1|	-	0.049	13.9	0.1	0.19	12.0	0.1	2.0	1	0	0	1	1	1	0	Cyanobacterial	and	plastid	NDH-1	subunit	M
TypeIII_RM_meth	PF12564.8	gi|288560425|ref|YP_003423911.1|	-	0.12	12.5	2.1	0.39	10.9	0.5	2.6	2	0	0	2	2	2	0	Type	III	restriction/modification	enzyme	methylation	subunit
RhoGAP	PF00620.27	gi|288560425|ref|YP_003423911.1|	-	0.84	9.5	3.3	0.51	10.1	0.6	2.0	2	0	0	2	2	2	0	RhoGAP	domain
DUF3578	PF12102.8	gi|288560426|ref|YP_003423912.1|	-	1.3e-22	80.3	1.6	6.1e-21	74.8	1.6	2.5	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF3578)
AAA_5	PF07728.14	gi|288560426|ref|YP_003423912.1|	-	9.3e-15	54.8	0.0	1.9e-14	53.9	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
IstB_IS21	PF01695.17	gi|288560426|ref|YP_003423912.1|	-	0.00045	20.0	0.1	0.0019	17.9	0.1	1.9	1	1	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_3	PF07726.11	gi|288560426|ref|YP_003423912.1|	-	0.0028	17.5	0.0	0.086	12.7	0.0	2.3	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
PhoH	PF02562.16	gi|288560426|ref|YP_003423912.1|	-	0.042	13.3	0.0	0.074	12.5	0.0	1.4	1	0	0	1	1	1	0	PhoH-like	protein
GvpD	PF07088.11	gi|288560426|ref|YP_003423912.1|	-	0.043	12.5	0.0	0.076	11.6	0.0	1.3	1	0	0	1	1	1	0	GvpD	gas	vesicle	protein
DnaB_C	PF03796.15	gi|288560426|ref|YP_003423912.1|	-	0.054	12.8	0.1	0.11	11.8	0.1	1.4	1	0	0	1	1	1	0	DnaB-like	helicase	C	terminal	domain
AAA_22	PF13401.6	gi|288560426|ref|YP_003423912.1|	-	0.11	12.8	0.0	0.47	10.7	0.0	2.2	1	1	1	2	2	2	0	AAA	domain
AAA_19	PF13245.6	gi|288560426|ref|YP_003423912.1|	-	0.11	12.8	0.5	4.8	7.5	0.5	2.4	1	1	0	1	1	1	0	AAA	domain
TIP49	PF06068.13	gi|288560426|ref|YP_003423912.1|	-	0.12	11.5	0.1	0.25	10.5	0.1	1.4	1	0	0	1	1	1	0	TIP49	P-loop	domain
AAA	PF00004.29	gi|288560426|ref|YP_003423912.1|	-	0.15	12.5	0.1	1.3	9.5	0.0	2.5	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_25	PF13481.6	gi|288560426|ref|YP_003423912.1|	-	0.19	11.3	0.0	0.38	10.3	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_16	PF13191.6	gi|288560426|ref|YP_003423912.1|	-	0.2	12.0	0.0	0.54	10.6	0.0	1.7	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_18	PF13238.6	gi|288560426|ref|YP_003423912.1|	-	0.36	11.4	7.8	1.2	9.7	0.6	4.2	2	2	1	3	3	3	0	AAA	domain
AAA_23	PF13476.6	gi|288560428|ref|YP_003423914.1|	-	2.3e-13	51.1	0.2	2.6e-13	51.0	0.2	1.1	1	0	0	1	1	1	1	AAA	domain
AAA_15	PF13175.6	gi|288560428|ref|YP_003423914.1|	-	3.2e-12	46.9	0.2	3.5e-12	46.7	0.2	1.1	1	0	0	1	1	1	1	AAA	ATPase	domain
SMC_N	PF02463.19	gi|288560428|ref|YP_003423914.1|	-	1.1e-09	38.1	0.1	1.2e-09	38.0	0.1	1.0	1	0	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_21	PF13304.6	gi|288560428|ref|YP_003423914.1|	-	1.3e-05	25.2	0.0	1.4e-05	25.0	0.0	1.2	1	0	0	1	1	1	1	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_29	PF13555.6	gi|288560428|ref|YP_003423914.1|	-	3.1e-05	23.6	0.0	5e-05	23.0	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
DUF2813	PF11398.8	gi|288560428|ref|YP_003423914.1|	-	3.2e-05	23.4	0.0	3.8e-05	23.1	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2813)
ABC_tran	PF00005.27	gi|288560428|ref|YP_003423914.1|	-	0.00042	20.8	0.0	0.00042	20.8	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
RsgA_GTPase	PF03193.16	gi|288560428|ref|YP_003423914.1|	-	0.00044	20.2	0.0	0.00057	19.8	0.0	1.2	1	0	0	1	1	1	1	RsgA	GTPase
AAA_27	PF13514.6	gi|288560428|ref|YP_003423914.1|	-	0.0019	17.9	0.0	0.0029	17.2	0.0	1.3	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|288560428|ref|YP_003423914.1|	-	0.0099	16.2	0.0	0.012	15.8	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.17	gi|288560428|ref|YP_003423914.1|	-	0.011	15.5	0.0	0.013	15.2	0.0	1.3	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA_5	PF07728.14	gi|288560428|ref|YP_003423914.1|	-	0.011	15.7	0.0	0.013	15.5	0.0	1.3	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
Rad17	PF03215.15	gi|288560428|ref|YP_003423914.1|	-	0.015	15.2	0.0	0.015	15.2	0.0	1.2	1	0	0	1	1	1	0	Rad17	P-loop	domain
PRK	PF00485.18	gi|288560428|ref|YP_003423914.1|	-	0.03	14.1	0.0	0.035	13.8	0.0	1.2	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_16	PF13191.6	gi|288560428|ref|YP_003423914.1|	-	0.032	14.6	0.0	0.032	14.6	0.0	1.2	1	0	0	1	1	1	0	AAA	ATPase	domain
RNA_helicase	PF00910.22	gi|288560428|ref|YP_003423914.1|	-	0.053	13.9	0.0	0.067	13.6	0.0	1.3	1	0	0	1	1	1	0	RNA	helicase
G-alpha	PF00503.20	gi|288560428|ref|YP_003423914.1|	-	0.11	11.7	0.0	0.11	11.7	0.0	1.2	1	0	0	1	1	1	0	G-protein	alpha	subunit
Mg_chelatase	PF01078.21	gi|288560428|ref|YP_003423914.1|	-	0.12	11.7	0.0	0.14	11.5	0.0	1.2	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
SMC_N	PF02463.19	gi|288560429|ref|YP_003423915.1|	-	0.011	15.2	12.3	0.0051	16.3	10.2	1.5	1	1	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
CobA_CobO_BtuR	PF02572.15	gi|288560429|ref|YP_003423915.1|	-	0.042	14.1	0.8	0.1	12.8	0.0	2.1	2	1	0	2	2	2	0	ATP:corrinoid	adenosyltransferase	BtuR/CobO/CobP
DUF1003	PF06210.11	gi|288560429|ref|YP_003423915.1|	-	0.81	9.8	3.9	23	5.2	0.1	3.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1003)
PDE4_UCR	PF18100.1	gi|288560429|ref|YP_003423915.1|	-	6.5	7.4	7.1	7.6	7.2	0.3	3.2	3	0	0	3	3	3	0	Phosphodiesterase	4	upstream	conserved	regions	(UCR)
Cas_Cas1	PF01867.16	gi|288560430|ref|YP_003423916.1|	-	8.3e-84	281.1	0.1	9.6e-84	280.9	0.1	1.0	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas1
6PF2K	PF01591.18	gi|288560430|ref|YP_003423916.1|	-	0.0027	17.1	0.3	0.0027	17.1	0.3	1.7	2	0	0	2	2	2	1	6-phosphofructo-2-kinase
RecR	PF02132.15	gi|288560431|ref|YP_003423917.1|	-	0.0023	17.5	1.8	0.0027	17.2	1.8	1.1	1	0	0	1	1	1	1	RecR	protein
zf-CCCH_2	PF14608.6	gi|288560431|ref|YP_003423917.1|	-	0.098	13.2	2.3	0.17	12.4	2.3	1.4	1	0	0	1	1	1	0	RNA-binding,	Nab2-type	zinc	finger
CRISPR_Cas2	PF09827.9	gi|288560432|ref|YP_003423918.1|	-	3.8e-16	59.0	0.0	4.5e-16	58.8	0.0	1.1	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas2
Cas6b_C	PF17262.2	gi|288560433|ref|YP_003423919.1|	-	1.3e-43	147.7	1.5	1.3e-43	147.7	1.5	1.6	2	0	0	2	2	2	1	Cas6b	C-terminal	domain
Cas6b_N	PF17955.1	gi|288560433|ref|YP_003423919.1|	-	1.1e-31	108.9	0.9	2.4e-31	107.8	0.9	1.6	1	0	0	1	1	1	1	Cas6b	N-terminal	domain
Glycoprotein_B	PF00606.18	gi|288560433|ref|YP_003423919.1|	-	0.037	13.5	0.1	0.062	12.7	0.1	1.4	1	0	0	1	1	1	0	Herpesvirus	Glycoprotein	B	ectodomain
Cas_Cas02710	PF09670.10	gi|288560434|ref|YP_003423920.1|	-	8.8e-63	212.4	2.4	1.8e-62	211.3	2.4	1.5	1	1	0	1	1	1	1	CRISPR-associated	protein	(Cas_Cas02710)
DUF1887	PF09002.11	gi|288560434|ref|YP_003423920.1|	-	0.00012	20.9	0.0	0.00028	19.7	0.0	1.6	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1887)
YebG	PF07130.12	gi|288560434|ref|YP_003423920.1|	-	0.034	14.0	3.4	0.53	10.2	0.5	2.6	2	0	0	2	2	2	0	YebG	protein
RAMPs	PF03787.15	gi|288560435|ref|YP_003423921.1|	-	1.3e-11	44.9	0.0	3e-11	43.8	0.0	1.6	1	1	0	1	1	1	1	RAMP	superfamily
Peptidase_M42	PF05343.14	gi|288560435|ref|YP_003423921.1|	-	0.073	12.1	0.0	0.11	11.5	0.0	1.2	1	0	0	1	1	1	0	M42	glutamyl	aminopeptidase
DUF4890	PF16231.5	gi|288560435|ref|YP_003423921.1|	-	0.48	10.9	4.2	0.44	11.0	0.8	2.4	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4890)
Csm4_C	PF17953.1	gi|288560436|ref|YP_003423922.1|	-	0.0016	18.3	0.1	0.024	14.5	0.0	2.6	2	1	0	2	2	2	1	CRISPR	Csm4	C-terminal	domain
RAMPs	PF03787.15	gi|288560437|ref|YP_003423923.1|	-	3.3e-16	60.0	0.8	4.3e-16	59.6	0.8	1.1	1	0	0	1	1	1	1	RAMP	superfamily
Csm2_III-A	PF03750.13	gi|288560438|ref|YP_003423924.1|	-	1.4e-22	80.7	1.8	1.8e-22	80.3	1.7	1.2	1	1	0	1	1	1	1	Csm2	Type	III-A
Csm1_B	PF18211.1	gi|288560439|ref|YP_003423925.1|	-	4.3e-32	109.8	1.5	8.8e-29	99.2	0.1	3.3	3	0	0	3	3	3	2	Csm1	subunit	domain	B
HD	PF01966.22	gi|288560439|ref|YP_003423925.1|	-	1.7e-06	28.3	0.3	4.9e-06	26.8	0.3	1.8	1	0	0	1	1	1	1	HD	domain
CRISPR_Cas9_WED	PF18061.1	gi|288560439|ref|YP_003423925.1|	-	0.056	13.5	10.8	0.19	11.8	4.3	3.3	3	0	0	3	3	3	0	CRISPR-Cas9	WED	domain
HD_6	PF18019.1	gi|288560439|ref|YP_003423925.1|	-	0.057	13.5	0.3	0.12	12.5	0.3	1.5	1	0	0	1	1	1	0	HD	domain
DUF1910	PF08928.10	gi|288560439|ref|YP_003423925.1|	-	0.092	12.7	2.7	0.21	11.6	0.3	2.9	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF1910)
DUF3039	PF11238.8	gi|288560439|ref|YP_003423925.1|	-	0.1	12.3	0.1	0.24	11.2	0.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3039)
ADK_lid	PF05191.14	gi|288560439|ref|YP_003423925.1|	-	2.2	8.3	4.6	11	6.1	1.9	2.6	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
UvrD-helicase	PF00580.21	gi|288560440|ref|YP_003423926.1|	-	6.1e-53	180.4	4.7	6.1e-53	180.4	4.7	5.1	2	1	0	2	2	2	1	UvrD/REP	helicase	N-terminal	domain
UvrD_C	PF13361.6	gi|288560440|ref|YP_003423926.1|	-	1.5e-42	146.2	15.3	1.5e-42	146.2	15.3	4.6	3	1	0	3	3	3	1	UvrD-like	helicase	C-terminal	domain
AAA_19	PF13245.6	gi|288560440|ref|YP_003423926.1|	-	6.4e-31	107.7	0.0	1.9e-30	106.1	0.0	1.9	1	0	0	1	1	1	1	AAA	domain
PDDEXK_1	PF12705.7	gi|288560440|ref|YP_003423926.1|	-	2.5e-20	73.5	0.0	8e-20	71.8	0.0	2.0	1	0	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
UvrD_C_2	PF13538.6	gi|288560440|ref|YP_003423926.1|	-	8.3e-09	35.1	0.0	0.00033	20.4	0.0	2.5	2	0	0	2	2	2	2	UvrD-like	helicase	C-terminal	domain
AAA_12	PF13087.6	gi|288560440|ref|YP_003423926.1|	-	2.3e-06	27.4	7.2	0.47	10.0	0.0	4.9	3	1	0	3	3	3	3	AAA	domain
Viral_helicase1	PF01443.18	gi|288560440|ref|YP_003423926.1|	-	3.4e-06	27.0	0.0	1.2	8.9	0.0	5.2	5	0	0	5	5	5	2	Viral	(Superfamily	1)	RNA	helicase
AAA_30	PF13604.6	gi|288560440|ref|YP_003423926.1|	-	0.00012	21.9	0.0	0.00054	19.7	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_11	PF13086.6	gi|288560440|ref|YP_003423926.1|	-	0.00088	19.1	2.7	0.01	15.6	0.0	2.9	2	0	0	2	2	2	1	AAA	domain
DUF2345	PF10106.9	gi|288560440|ref|YP_003423926.1|	-	0.043	13.7	0.3	0.072	13.0	0.3	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2345)
CSD	PF00313.22	gi|288560441|ref|YP_003423927.1|	-	1.1e-06	28.4	0.2	2.1e-06	27.5	0.2	1.5	1	0	0	1	1	1	1	'Cold-shock'	DNA-binding	domain
TPR_12	PF13424.6	gi|288560441|ref|YP_003423927.1|	-	0.0012	19.1	7.3	3.4	8.0	0.4	5.3	4	1	1	5	5	5	2	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|288560441|ref|YP_003423927.1|	-	0.0026	17.8	21.5	0.19	12.0	0.1	6.4	6	0	0	6	6	6	2	Tetratricopeptide	repeat
TPR_10	PF13374.6	gi|288560441|ref|YP_003423927.1|	-	0.033	14.0	0.2	50	4.0	0.0	3.6	3	0	0	3	3	3	0	Tetratricopeptide	repeat
OB_RNB	PF08206.11	gi|288560441|ref|YP_003423927.1|	-	0.081	12.6	0.9	0.18	11.5	0.9	1.6	1	0	0	1	1	1	0	Ribonuclease	B	OB	domain
ANAPC3	PF12895.7	gi|288560441|ref|YP_003423927.1|	-	0.11	12.7	5.3	0.19	12.0	1.1	3.2	4	0	0	4	4	4	0	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_2	PF07719.17	gi|288560441|ref|YP_003423927.1|	-	0.14	12.4	12.6	5.1	7.5	0.4	5.9	5	1	1	6	6	6	0	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|288560441|ref|YP_003423927.1|	-	1.7	8.6	14.6	12	6.0	0.5	5.2	5	0	0	5	5	5	0	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|288560442|ref|YP_003423928.1|	-	2.6e-07	30.8	19.6	0.00041	20.5	0.3	6.0	4	2	1	6	6	6	4	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_9	PF13371.6	gi|288560442|ref|YP_003423928.1|	-	4.9e-05	23.4	0.1	0.0042	17.2	0.0	2.9	3	0	0	3	3	3	1	Tetratricopeptide	repeat
TPR_17	PF13431.6	gi|288560442|ref|YP_003423928.1|	-	0.00022	21.4	1.0	53	4.5	0.0	5.7	5	1	0	5	5	5	0	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|288560442|ref|YP_003423928.1|	-	0.00032	20.9	10.7	0.85	10.0	0.0	6.6	6	1	0	6	6	6	1	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|288560442|ref|YP_003423928.1|	-	0.015	15.8	3.8	26	5.4	0.1	5.5	7	0	0	7	7	7	0	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|288560442|ref|YP_003423928.1|	-	0.046	13.9	26.0	36	4.8	0.2	9.0	11	0	0	11	11	11	0	Tetratricopeptide	repeat
Curto_V2	PF07325.11	gi|288560442|ref|YP_003423928.1|	-	0.07	13.0	0.3	0.07	13.0	0.3	2.5	2	0	0	2	2	2	0	Curtovirus	V2	protein
DUF3856	PF12968.7	gi|288560442|ref|YP_003423928.1|	-	0.093	12.8	1.0	24	5.0	0.0	3.9	5	1	0	5	5	5	0	Domain	of	Unknown	Function	(DUF3856)
TPR_6	PF13174.6	gi|288560442|ref|YP_003423928.1|	-	0.12	13.0	8.6	1.1e+02	3.7	0.0	7.3	8	0	0	8	8	8	0	Tetratricopeptide	repeat
YejG	PF13989.6	gi|288560442|ref|YP_003423928.1|	-	0.19	12.2	2.0	2.2	8.7	0.1	3.0	3	0	0	3	3	3	0	YejG-like	protein
SRP_TPR_like	PF17004.5	gi|288560442|ref|YP_003423928.1|	-	0.34	10.9	18.3	0.25	11.4	1.0	4.6	4	1	0	4	4	4	0	Putative	TPR-like	repeat
TPR_8	PF13181.6	gi|288560442|ref|YP_003423928.1|	-	0.5	10.7	31.9	4.3	7.8	1.4	9.0	9	1	1	10	10	10	0	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|288560442|ref|YP_003423928.1|	-	1.9	8.4	23.2	42	4.2	0.0	8.2	8	0	0	8	8	8	0	Tetratricopeptide	repeat
Phage_holin_2_3	PF16080.5	gi|288560443|ref|YP_003423929.1|	-	0.18	11.6	0.9	0.6	9.9	0.2	1.9	2	0	0	2	2	2	0	Bacteriophage	holin	family	HP1
Cas_Cas02710	PF09670.10	gi|288560444|ref|YP_003423930.1|	-	6.4e-67	226.0	3.6	7.8e-67	225.7	3.6	1.1	1	0	0	1	1	1	1	CRISPR-associated	protein	(Cas_Cas02710)
DUF1811	PF08838.10	gi|288560444|ref|YP_003423930.1|	-	0.0072	16.5	0.6	0.31	11.3	0.0	3.1	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF1811)
Imm6	PF14434.6	gi|288560445|ref|YP_003423931.1|	-	0.0046	16.9	1.0	0.012	15.5	0.8	1.7	1	1	0	1	1	1	1	Immunity	protein	Imm6
Barstar	PF01337.18	gi|288560445|ref|YP_003423931.1|	-	0.052	13.6	0.1	0.2	11.7	0.1	1.9	1	1	0	1	1	1	0	Barstar	(barnase	inhibitor)
DivIVA	PF05103.13	gi|288560445|ref|YP_003423931.1|	-	0.055	13.6	0.8	0.092	12.8	0.2	1.6	2	0	0	2	2	2	0	DivIVA	protein
MFS_1	PF07690.16	gi|288560447|ref|YP_003423933.1|	-	2.7e-55	187.7	78.0	6.1e-43	147.1	53.7	3.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.24	gi|288560447|ref|YP_003423933.1|	-	4.8e-07	29.0	13.9	4.8e-07	29.0	13.9	4.4	1	1	3	4	4	4	3	Sugar	(and	other)	transporter
MFS_3	PF05977.13	gi|288560447|ref|YP_003423933.1|	-	6.8e-07	28.1	24.2	4.2e-05	22.1	13.3	2.3	2	0	0	2	2	2	2	Transmembrane	secretion	effector
PUCC	PF03209.15	gi|288560447|ref|YP_003423933.1|	-	3.5e-05	23.0	13.7	0.0021	17.1	1.7	2.9	2	1	0	2	2	2	2	PUCC	protein
MFS_2	PF13347.6	gi|288560447|ref|YP_003423933.1|	-	7.4e-05	21.5	49.8	0.00015	20.4	29.2	3.4	1	1	2	3	3	3	2	MFS/sugar	transport	protein
EamA	PF00892.20	gi|288560447|ref|YP_003423933.1|	-	0.0014	18.9	7.4	0.0014	18.9	7.4	5.3	2	2	2	4	4	4	1	EamA-like	transporter	family
OAD_gamma	PF04277.13	gi|288560447|ref|YP_003423933.1|	-	1.2	9.8	0.0	1.2	9.8	0.0	4.8	5	1	0	5	5	5	0	Oxaloacetate	decarboxylase,	gamma	chain
DUF2207	PF09972.9	gi|288560448|ref|YP_003423934.1|	-	5.1e-115	385.1	6.4	6.5e-115	384.7	6.4	1.1	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2207)
DUF4064	PF13273.6	gi|288560448|ref|YP_003423934.1|	-	1.5e-05	25.2	3.5	2.7e-05	24.4	1.0	2.5	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF4064)
DUF4870	PF09685.10	gi|288560448|ref|YP_003423934.1|	-	0.032	14.3	0.5	0.032	14.3	0.5	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4870)
CRPA	PF05745.11	gi|288560448|ref|YP_003423934.1|	-	0.044	13.8	1.2	0.13	12.3	1.2	1.7	1	0	0	1	1	1	0	Chlamydia	15	kDa	cysteine-rich	outer	membrane	protein	(CRPA)
DUF2518	PF10726.9	gi|288560448|ref|YP_003423934.1|	-	0.049	13.3	3.4	0.11	12.2	3.4	1.5	1	0	0	1	1	1	0	Protein	of	function	(DUF2518)
DUF2157	PF09925.9	gi|288560448|ref|YP_003423934.1|	-	0.081	12.7	0.3	0.34	10.7	0.0	2.2	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2157)
DUF5493	PF17597.2	gi|288560448|ref|YP_003423934.1|	-	0.18	12.0	4.8	0.51	10.6	4.8	1.7	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5493)
TRIQK	PF15168.6	gi|288560448|ref|YP_003423934.1|	-	0.2	11.6	0.0	0.2	11.6	0.0	3.0	2	1	1	3	3	3	0	Triple	QxxK/R	motif-containing	protein	family
PRRSV_2b	PF07069.11	gi|288560448|ref|YP_003423934.1|	-	0.39	11.3	6.3	0.92	10.1	6.3	1.5	1	0	0	1	1	1	0	Porcine	reproductive	and	respiratory	syndrome	virus	2b
DUF2207	PF09972.9	gi|288560449|ref|YP_003423935.1|	-	1.7e-23	83.2	6.2	2.1e-23	82.9	6.2	1.1	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2207)
DUF1493	PF07377.12	gi|288560449|ref|YP_003423935.1|	-	0.2	12.1	4.2	0.99	9.9	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1493)
LemA	PF04011.12	gi|288560450|ref|YP_003423936.1|	-	9.1e-65	217.1	0.5	1.1e-64	216.8	0.5	1.1	1	0	0	1	1	1	1	LemA	family
Pilin_N	PF07790.11	gi|288560450|ref|YP_003423936.1|	-	0.0095	16.8	0.4	0.016	16.1	0.4	1.4	1	0	0	1	1	1	1	Archaeal	Type	IV	pilin,	N-terminal
Ribosomal_L36e	PF01158.18	gi|288560450|ref|YP_003423936.1|	-	0.019	15.2	0.0	0.03	14.6	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	protein	L36e
Saf_2TM	PF18303.1	gi|288560450|ref|YP_003423936.1|	-	0.024	14.2	0.5	0.034	13.7	0.5	1.2	1	0	0	1	1	1	0	SAVED-fused	2TM	effector	domain
5_3_exonuc	PF01367.20	gi|288560450|ref|YP_003423936.1|	-	0.036	14.7	0.1	0.071	13.7	0.1	1.4	1	0	0	1	1	1	0	5'-3'	exonuclease,	C-terminal	SAM	fold
GD_N	PF16030.5	gi|288560450|ref|YP_003423936.1|	-	0.077	13.3	0.0	0.15	12.4	0.0	1.5	1	1	0	1	1	1	0	Serine	protease	gd	N-terminus
DUF2207	PF09972.9	gi|288560451|ref|YP_003423937.1|	-	2.8e-107	359.5	8.4	3.5e-107	359.2	8.4	1.1	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2207)
Wzy_C	PF04932.15	gi|288560451|ref|YP_003423937.1|	-	0.021	14.4	0.5	0.32	10.6	0.1	2.3	2	0	0	2	2	2	0	O-Antigen	ligase
DUF2207	PF09972.9	gi|288560452|ref|YP_003423938.1|	-	4.6e-88	296.1	5.7	6.1e-88	295.7	5.7	1.1	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2207)
FOG_N	PF15888.5	gi|288560452|ref|YP_003423938.1|	-	0.066	13.6	0.7	0.18	12.2	0.7	1.7	1	0	0	1	1	1	0	Folded	gastrulation	N-terminus
FA_desaturase	PF00487.24	gi|288560452|ref|YP_003423938.1|	-	0.14	12.0	0.1	0.25	11.2	0.1	1.3	1	0	0	1	1	1	0	Fatty	acid	desaturase
Methyltrans_Mon	PF14314.6	gi|288560453|ref|YP_003423939.1|	-	0.044	11.8	0.0	0.052	11.6	0.0	1.0	1	0	0	1	1	1	0	Virus-capping	methyltransferase
Shadoo	PF14999.6	gi|288560453|ref|YP_003423939.1|	-	0.16	12.1	0.0	0.24	11.5	0.0	1.2	1	0	0	1	1	1	0	Shadow	of	prion	protein,	neuroprotective
Sipho_tail	PF05709.11	gi|288560454|ref|YP_003423940.1|	-	0.00028	20.4	2.1	0.00035	20.1	2.1	1.1	1	0	0	1	1	1	1	Phage	tail	protein
AdoHcyase_NAD	PF00670.21	gi|288560456|ref|YP_003423942.1|	-	0.062	13.4	0.1	0.078	13.1	0.1	1.1	1	0	0	1	1	1	0	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
YoaP	PF14268.6	gi|288560456|ref|YP_003423942.1|	-	0.078	12.5	0.1	0.64	9.6	0.0	2.1	2	0	0	2	2	2	0	YoaP-like
MFS_1	PF07690.16	gi|288560457|ref|YP_003423943.1|	-	3.3e-37	128.2	31.6	1.4e-24	86.7	13.3	2.4	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_1_like	PF12832.7	gi|288560457|ref|YP_003423943.1|	-	3.1e-07	29.6	19.0	0.0024	16.8	0.3	2.2	1	1	1	2	2	2	2	MFS_1	like	family
MFS_3	PF05977.13	gi|288560457|ref|YP_003423943.1|	-	3.5e-05	22.4	1.9	0.00017	20.1	0.0	2.1	2	0	0	2	2	2	1	Transmembrane	secretion	effector
PUCC	PF03209.15	gi|288560457|ref|YP_003423943.1|	-	0.00011	21.3	7.8	0.00011	21.3	7.8	2.1	2	1	1	3	3	3	1	PUCC	protein
Ndc1_Nup	PF09531.10	gi|288560457|ref|YP_003423943.1|	-	7.4	5.1	6.7	1.4	7.6	2.1	2.0	1	1	0	2	2	2	0	Nucleoporin	protein	Ndc1-Nup
SNF	PF00209.18	gi|288560458|ref|YP_003423944.1|	-	2.1e-81	274.2	53.2	5.7e-51	173.8	30.5	2.1	1	1	1	2	2	2	2	Sodium:neurotransmitter	symporter	family
Abhydrolase_1	PF00561.20	gi|288560461|ref|YP_003423947.1|	-	2e-35	122.7	0.1	2.6e-35	122.3	0.1	1.1	1	0	0	1	1	1	1	alpha/beta	hydrolase	fold
CBS	PF00571.28	gi|288560461|ref|YP_003423947.1|	-	4.8e-23	81.4	1.6	2.2e-13	50.4	0.2	2.6	2	0	0	2	2	2	2	CBS	domain
Esterase	PF00756.20	gi|288560461|ref|YP_003423947.1|	-	0.00078	19.2	0.0	0.0011	18.6	0.0	1.2	1	0	0	1	1	1	1	Putative	esterase
Hydrolase_4	PF12146.8	gi|288560461|ref|YP_003423947.1|	-	0.0091	15.3	0.0	0.021	14.1	0.0	1.6	2	0	0	2	2	2	1	Serine	aminopeptidase,	S33
Abhydrolase_6	PF12697.7	gi|288560461|ref|YP_003423947.1|	-	0.088	13.4	0.0	0.11	13.1	0.0	1.3	1	0	0	1	1	1	0	Alpha/beta	hydrolase	family
PMBR	PF09373.10	gi|288560463|ref|YP_003423949.1|	-	7.9e-14	51.1	0.1	2.5e-06	27.4	0.0	2.1	2	0	0	2	2	2	2	Pseudomurein-binding	repeat
DUF4524	PF15025.6	gi|288560463|ref|YP_003423949.1|	-	0.035	13.8	0.0	0.037	13.8	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4524)
SurA_N_2	PF13623.6	gi|288560463|ref|YP_003423949.1|	-	0.044	13.6	0.3	0.073	12.9	0.2	1.4	1	1	0	1	1	1	0	SurA	N-terminal	domain
IMPDH	PF00478.25	gi|288560464|ref|YP_003423950.1|	-	2.8e-145	483.6	10.6	3.2e-145	483.5	10.6	1.0	1	0	0	1	1	1	1	IMP	dehydrogenase	/	GMP	reductase	domain
CBS	PF00571.28	gi|288560464|ref|YP_003423950.1|	-	9.5e-29	99.6	4.7	1.1e-14	54.6	0.2	3.0	2	0	0	2	2	2	2	CBS	domain
NMO	PF03060.15	gi|288560464|ref|YP_003423950.1|	-	2.9e-10	40.1	8.2	5e-05	22.9	4.9	2.3	2	0	0	2	2	2	2	Nitronate	monooxygenase
FMN_dh	PF01070.18	gi|288560464|ref|YP_003423950.1|	-	5.9e-07	28.8	12.5	8.9e-07	28.3	10.2	2.4	2	1	0	2	2	2	1	FMN-dependent	dehydrogenase
His_biosynth	PF00977.21	gi|288560464|ref|YP_003423950.1|	-	0.002	17.6	2.1	0.042	13.3	0.2	2.6	1	1	1	2	2	2	1	Histidine	biosynthesis	protein
Glu_synthase	PF01645.17	gi|288560464|ref|YP_003423950.1|	-	0.011	14.9	5.4	0.027	13.6	5.4	1.7	1	0	0	1	1	1	0	Conserved	region	in	glutamate	synthase
ThiG	PF05690.14	gi|288560464|ref|YP_003423950.1|	-	0.024	13.9	0.8	0.024	13.9	0.8	2.5	2	0	0	2	2	2	0	Thiazole	biosynthesis	protein	ThiG
GAF	PF01590.26	gi|288560464|ref|YP_003423950.1|	-	0.14	12.7	0.0	1.3	9.7	0.0	2.3	2	0	0	2	2	2	0	GAF	domain
4HFCP_synth	PF04476.13	gi|288560465|ref|YP_003423951.1|	-	4.4e-86	288.3	0.0	5e-86	288.1	0.0	1.0	1	0	0	1	1	1	1	4-HFC-P	synthase
QRPTase_C	PF01729.19	gi|288560465|ref|YP_003423951.1|	-	0.0035	17.2	0.0	0.062	13.1	0.0	2.6	1	1	1	2	2	2	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
DUF11	PF01345.18	gi|288560466|ref|YP_003423952.1|	-	5.8e-72	238.1	47.3	3.9e-10	39.9	4.5	11.6	11	1	0	11	11	11	10	Domain	of	unknown	function	DUF11
NPCBM_assoc	PF10633.9	gi|288560466|ref|YP_003423952.1|	-	2.2e-07	31.0	15.0	0.67	10.2	0.1	10.0	10	0	0	10	10	10	2	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
CARDB	PF07705.11	gi|288560466|ref|YP_003423952.1|	-	3.6e-06	27.2	138.7	0.04	14.2	3.5	14.4	12	5	0	12	12	12	8	CARDB
LUD_dom	PF02589.15	gi|288560467|ref|YP_003423953.1|	-	1.8e-34	119.1	0.2	9.8e-34	116.7	0.2	1.9	1	1	0	1	1	1	1	LUD	domain
Fer4_8	PF13183.6	gi|288560467|ref|YP_003423953.1|	-	1.2e-11	44.9	3.5	2.7e-11	43.7	3.5	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|288560467|ref|YP_003423953.1|	-	1.2e-08	35.0	5.3	2.5e-08	33.9	5.3	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|288560467|ref|YP_003423953.1|	-	3.4e-08	34.0	2.5	7.5e-08	32.8	2.5	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|288560467|ref|YP_003423953.1|	-	8.5e-08	32.3	1.3	2.1e-07	31.0	1.1	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|288560467|ref|YP_003423953.1|	-	9.6e-08	32.5	2.1	3e-07	30.9	2.1	1.9	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|288560467|ref|YP_003423953.1|	-	8.7e-06	25.3	16.3	0.0062	16.3	5.6	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|288560467|ref|YP_003423953.1|	-	4.5e-05	23.6	7.5	0.01	16.3	1.0	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|288560467|ref|YP_003423953.1|	-	7.6e-05	22.8	6.5	0.02	15.0	1.2	2.6	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|288560467|ref|YP_003423953.1|	-	0.00021	21.2	14.6	0.047	13.8	2.1	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|288560467|ref|YP_003423953.1|	-	0.00061	19.7	16.4	0.087	12.9	5.9	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|288560467|ref|YP_003423953.1|	-	0.00065	20.6	7.4	0.00065	20.6	7.4	2.8	2	2	1	3	3	3	2	4Fe-4S	double	cluster	binding	domain
Fer4_22	PF17179.4	gi|288560467|ref|YP_003423953.1|	-	0.0026	18.6	5.5	0.57	11.1	0.9	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Globin	PF00042.22	gi|288560467|ref|YP_003423953.1|	-	0.0058	17.2	0.1	0.013	16.0	0.0	1.6	2	0	0	2	2	1	1	Globin
Fer4_3	PF12798.7	gi|288560467|ref|YP_003423953.1|	-	0.044	14.7	17.2	0.09	13.8	3.6	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
DUF4665	PF15679.5	gi|288560467|ref|YP_003423953.1|	-	0.27	11.9	2.3	0.65	10.6	2.3	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4665)
Fer4_15	PF13459.6	gi|288560467|ref|YP_003423953.1|	-	0.46	11.3	4.6	14	6.5	0.3	2.6	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
CCG	PF02754.16	gi|288560468|ref|YP_003423954.1|	-	2.2e-31	107.9	2.4	2.5e-17	62.9	0.1	2.3	2	0	0	2	2	2	2	Cysteine-rich	domain
zf-FLZ	PF04570.14	gi|288560468|ref|YP_003423954.1|	-	0.0077	15.7	1.0	2.3	7.8	0.1	2.3	2	0	0	2	2	2	2	zinc-finger	of	the	FCS-type,	C2-C2
N6_Mtase	PF02384.16	gi|288560468|ref|YP_003423954.1|	-	0.087	12.1	0.0	0.21	10.8	0.0	1.6	2	0	0	2	2	2	0	N-6	DNA	Methylase
DUF2304	PF10066.9	gi|288560469|ref|YP_003423955.1|	-	1.3e-22	80.0	2.4	1.4e-22	79.9	2.4	1.0	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2304)
MASE3	PF17159.4	gi|288560469|ref|YP_003423955.1|	-	0.0025	17.5	1.5	0.0026	17.4	1.5	1.0	1	0	0	1	1	1	1	Membrane-associated	sensor	domain
DUF2976	PF11190.8	gi|288560469|ref|YP_003423955.1|	-	0.1	12.4	1.8	0.54	10.1	0.6	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2976)
Peptidase_M56	PF05569.11	gi|288560469|ref|YP_003423955.1|	-	0.83	8.8	3.9	0.6	9.3	2.4	1.5	1	1	1	2	2	2	0	BlaR1	peptidase	M56
Glycos_transf_2	PF00535.26	gi|288560470|ref|YP_003423956.1|	-	2.1e-25	89.5	0.0	2.6e-25	89.2	0.0	1.1	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|288560470|ref|YP_003423956.1|	-	0.00019	21.4	0.0	0.00021	21.2	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
PGM_PMM_II	PF02879.16	gi|288560470|ref|YP_003423956.1|	-	0.00028	21.5	0.0	2	9.1	0.0	3.2	2	1	1	3	3	3	2	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
Glyco_tranf_2_4	PF13704.6	gi|288560470|ref|YP_003423956.1|	-	0.0084	16.6	0.0	0.014	15.9	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
DMRL_synthase	PF00885.19	gi|288560471|ref|YP_003423957.1|	-	5.6e-17	61.9	0.0	6.4e-17	61.7	0.0	1.0	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
TPR_8	PF13181.6	gi|288560472|ref|YP_003423958.1|	-	0.00077	19.5	0.1	0.00077	19.5	0.1	3.5	4	0	0	4	4	4	1	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|288560472|ref|YP_003423958.1|	-	0.002	18.1	0.3	0.002	18.1	0.3	2.9	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|288560472|ref|YP_003423958.1|	-	0.0069	16.6	0.3	1.4	9.3	0.0	2.5	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TPR_17	PF13431.6	gi|288560472|ref|YP_003423958.1|	-	0.01	16.2	1.6	12	6.5	0.1	3.5	3	0	0	3	3	3	1	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|288560472|ref|YP_003423958.1|	-	0.071	13.0	0.3	0.26	11.2	0.3	2.0	1	0	0	1	1	1	0	Tetratricopeptide	repeat
RIB43A	PF05914.12	gi|288560472|ref|YP_003423958.1|	-	0.08	11.7	5.3	0.12	11.1	5.3	1.1	1	0	0	1	1	1	0	RIB43A
TPR_14	PF13428.6	gi|288560472|ref|YP_003423958.1|	-	0.11	13.4	0.1	0.33	11.9	0.0	1.9	2	0	0	2	2	2	0	Tetratricopeptide	repeat
ABC_tran	PF00005.27	gi|288560473|ref|YP_003423959.1|	-	7.5e-32	110.7	0.0	1.8e-31	109.5	0.0	1.6	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.6	gi|288560473|ref|YP_003423959.1|	-	2.6e-13	50.5	0.4	1.5e-09	38.1	0.0	2.2	1	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|288560473|ref|YP_003423959.1|	-	7e-08	32.2	0.0	5.9e-06	25.9	0.0	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.6	gi|288560473|ref|YP_003423959.1|	-	0.0082	15.9	0.0	2.6	7.7	0.0	2.1	1	1	0	2	2	2	2	AAA	ATPase	domain
AAA_29	PF13555.6	gi|288560473|ref|YP_003423959.1|	-	0.02	14.6	0.1	0.039	13.7	0.1	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_13	PF13166.6	gi|288560473|ref|YP_003423959.1|	-	0.098	11.3	0.0	7.1	5.1	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
CbiZ	PF01955.18	gi|288560474|ref|YP_003423960.1|	-	1.6e-53	181.7	0.0	2e-53	181.4	0.0	1.1	1	0	0	1	1	1	1	Adenosylcobinamide	amidohydrolase
ECF-ribofla_trS	PF07155.12	gi|288560475|ref|YP_003423961.1|	-	2.8e-12	47.0	20.3	2.8e-12	47.0	20.3	1.4	2	0	0	2	2	2	1	ECF-type	riboflavin	transporter,	S	component
ECF_trnsprt	PF12822.7	gi|288560475|ref|YP_003423961.1|	-	4.3e-06	26.9	36.9	4.9e-06	26.8	28.3	3.0	2	1	0	2	2	2	1	ECF	transporter,	substrate-specific	component
DUF2157	PF09925.9	gi|288560475|ref|YP_003423961.1|	-	0.71	9.7	10.7	0.75	9.6	9.3	1.8	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2157)
DUF3754	PF12576.8	gi|288560475|ref|YP_003423961.1|	-	1.1	9.3	4.2	2.3	8.2	4.2	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3754)
Baculo_E56	PF04639.12	gi|288560475|ref|YP_003423961.1|	-	6.2	6.0	6.2	1.1	8.5	2.2	1.7	2	0	0	2	2	2	0	Baculoviral	E56	protein,	specific	to	ODV	envelope
ABC_tran	PF00005.27	gi|288560476|ref|YP_003423962.1|	-	7.5e-51	172.2	0.2	7.3e-26	91.3	0.0	2.6	3	0	0	3	3	2	2	ABC	transporter
AAA_21	PF13304.6	gi|288560476|ref|YP_003423962.1|	-	5.7e-15	55.9	23.9	3.4e-05	23.8	0.1	5.3	2	2	3	5	5	5	3	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|288560476|ref|YP_003423962.1|	-	6.4e-10	38.8	1.0	0.00018	21.0	0.0	2.6	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
Rad17	PF03215.15	gi|288560476|ref|YP_003423962.1|	-	3.5e-09	36.9	0.7	2.4e-06	27.6	0.0	2.7	2	1	0	2	2	2	1	Rad17	P-loop	domain
AAA_29	PF13555.6	gi|288560476|ref|YP_003423962.1|	-	1.4e-08	34.3	0.5	0.005	16.6	0.0	2.7	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
RsgA_GTPase	PF03193.16	gi|288560476|ref|YP_003423962.1|	-	2.4e-07	30.8	0.7	0.017	15.0	0.0	2.8	3	0	0	3	3	2	2	RsgA	GTPase
AAA_18	PF13238.6	gi|288560476|ref|YP_003423962.1|	-	1.6e-06	28.7	0.1	0.0012	19.4	0.0	3.6	3	0	0	3	3	3	1	AAA	domain
AAA_22	PF13401.6	gi|288560476|ref|YP_003423962.1|	-	2.6e-06	27.8	2.4	0.00076	19.8	0.2	3.6	3	1	0	3	3	3	1	AAA	domain
MobB	PF03205.14	gi|288560476|ref|YP_003423962.1|	-	3.6e-06	26.9	0.0	0.0017	18.3	0.0	2.5	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_16	PF13191.6	gi|288560476|ref|YP_003423962.1|	-	9e-06	26.2	0.0	0.0023	18.3	0.0	2.5	2	0	0	2	2	2	1	AAA	ATPase	domain
RNA_helicase	PF00910.22	gi|288560476|ref|YP_003423962.1|	-	1.7e-05	25.1	0.1	0.021	15.2	0.0	3.1	2	0	0	2	2	2	1	RNA	helicase
NACHT	PF05729.12	gi|288560476|ref|YP_003423962.1|	-	3.4e-05	23.8	0.6	0.12	12.3	0.0	3.0	3	0	0	3	3	3	2	NACHT	domain
AAA_33	PF13671.6	gi|288560476|ref|YP_003423962.1|	-	8.7e-05	22.7	1.3	0.0082	16.3	0.1	2.7	2	1	0	2	2	2	1	AAA	domain
NB-ARC	PF00931.22	gi|288560476|ref|YP_003423962.1|	-	8.9e-05	21.8	0.1	0.15	11.2	0.0	3.3	3	0	0	3	3	3	1	NB-ARC	domain
AAA_25	PF13481.6	gi|288560476|ref|YP_003423962.1|	-	0.00011	21.8	0.0	0.027	14.0	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
AAA_23	PF13476.6	gi|288560476|ref|YP_003423962.1|	-	0.00014	22.5	12.8	0.015	15.9	0.1	3.4	3	0	0	3	3	3	2	AAA	domain
AAA	PF00004.29	gi|288560476|ref|YP_003423962.1|	-	0.00014	22.3	0.1	0.014	15.8	0.1	3.1	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
IstB_IS21	PF01695.17	gi|288560476|ref|YP_003423962.1|	-	0.00038	20.2	0.2	0.61	9.8	0.0	4.0	4	0	0	4	4	4	1	IstB-like	ATP	binding	protein
AAA_5	PF07728.14	gi|288560476|ref|YP_003423962.1|	-	0.00041	20.4	0.4	0.076	13.0	0.0	3.2	3	0	0	3	3	3	1	AAA	domain	(dynein-related	subfamily)
TsaE	PF02367.17	gi|288560476|ref|YP_003423962.1|	-	0.00045	20.2	0.0	0.2	11.6	0.0	2.4	2	0	0	2	2	2	1	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_24	PF13479.6	gi|288560476|ref|YP_003423962.1|	-	0.00091	19.0	0.2	0.14	11.9	0.0	3.0	3	0	0	3	3	3	1	AAA	domain
AAA_14	PF13173.6	gi|288560476|ref|YP_003423962.1|	-	0.0014	18.7	3.7	0.2	11.7	0.0	4.1	4	0	0	4	4	4	1	AAA	domain
Mg_chelatase	PF01078.21	gi|288560476|ref|YP_003423962.1|	-	0.0019	17.6	0.0	0.28	10.5	0.0	2.4	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_7	PF12775.7	gi|288560476|ref|YP_003423962.1|	-	0.0021	17.6	0.2	0.081	12.4	0.0	2.4	2	0	0	2	2	2	1	P-loop	containing	dynein	motor	region
AAA_28	PF13521.6	gi|288560476|ref|YP_003423962.1|	-	0.0029	17.8	0.4	0.14	12.4	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
AAA_19	PF13245.6	gi|288560476|ref|YP_003423962.1|	-	0.0034	17.7	0.0	4.5	7.6	0.0	2.7	3	0	0	3	3	2	0	AAA	domain
PRK	PF00485.18	gi|288560476|ref|YP_003423962.1|	-	0.0037	17.0	4.5	0.37	10.5	0.0	3.9	4	0	0	4	4	4	1	Phosphoribulokinase	/	Uridine	kinase	family
AAA_30	PF13604.6	gi|288560476|ref|YP_003423962.1|	-	0.0041	16.9	0.0	2.7	7.7	0.0	2.6	3	0	0	3	3	3	1	AAA	domain
NTPase_1	PF03266.15	gi|288560476|ref|YP_003423962.1|	-	0.0047	16.8	2.1	0.55	10.1	0.0	3.1	3	0	0	3	3	3	1	NTPase
PduV-EutP	PF10662.9	gi|288560476|ref|YP_003423962.1|	-	0.0061	16.3	0.0	0.083	12.6	0.0	2.4	2	0	0	2	2	2	1	Ethanolamine	utilisation	-	propanediol	utilisation
RuvB_N	PF05496.12	gi|288560476|ref|YP_003423962.1|	-	0.0068	16.2	0.1	0.2	11.4	0.0	2.6	3	0	0	3	3	2	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
T2SSE	PF00437.20	gi|288560476|ref|YP_003423962.1|	-	0.0077	15.3	0.0	0.86	8.6	0.0	2.2	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
MMR_HSR1	PF01926.23	gi|288560476|ref|YP_003423962.1|	-	0.014	15.4	0.2	3.2	7.9	0.1	2.8	2	0	0	2	2	2	0	50S	ribosome-binding	GTPase
SbcCD_C	PF13558.6	gi|288560476|ref|YP_003423962.1|	-	0.015	15.5	0.0	10	6.4	0.0	3.8	2	2	0	2	2	2	0	Putative	exonuclease	SbcCD,	C	subunit
Roc	PF08477.13	gi|288560476|ref|YP_003423962.1|	-	0.017	15.3	0.2	2.7	8.2	0.0	2.6	2	0	0	2	2	2	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
SRP54	PF00448.22	gi|288560476|ref|YP_003423962.1|	-	0.02	14.5	0.2	0.67	9.5	0.0	2.3	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
TniB	PF05621.11	gi|288560476|ref|YP_003423962.1|	-	0.021	14.3	0.3	2.4	7.5	0.1	2.6	2	0	0	2	2	2	0	Bacterial	TniB	protein
Zeta_toxin	PF06414.12	gi|288560476|ref|YP_003423962.1|	-	0.024	13.9	0.4	0.21	10.8	0.0	2.5	2	1	0	2	2	2	0	Zeta	toxin
AAA_11	PF13086.6	gi|288560476|ref|YP_003423962.1|	-	0.024	14.4	1.9	0.27	11.0	0.0	2.6	3	0	0	3	3	3	0	AAA	domain
ATP_bind_1	PF03029.17	gi|288560476|ref|YP_003423962.1|	-	0.037	13.8	0.3	4.7	6.9	0.1	2.5	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
SRPRB	PF09439.10	gi|288560476|ref|YP_003423962.1|	-	0.055	12.9	0.1	0.28	10.6	0.0	2.1	2	0	0	2	2	2	0	Signal	recognition	particle	receptor	beta	subunit
AFG1_ATPase	PF03969.16	gi|288560476|ref|YP_003423962.1|	-	0.11	11.4	0.1	3.3	6.5	0.0	2.7	3	0	0	3	3	3	0	AFG1-like	ATPase
AAA_17	PF13207.6	gi|288560476|ref|YP_003423962.1|	-	0.15	12.5	3.1	4.2	7.8	0.1	2.6	2	0	0	2	2	2	0	AAA	domain
Dynamin_N	PF00350.23	gi|288560476|ref|YP_003423962.1|	-	0.52	10.4	2.7	6.5	6.8	0.0	3.4	3	1	0	3	3	3	0	Dynamin	family
RRN3	PF05327.11	gi|288560477|ref|YP_003423963.1|	-	0.045	12.3	1.4	0.056	12.0	1.4	1.1	1	0	0	1	1	1	0	RNA	polymerase	I	specific	transcription	initiation	factor	RRN3
CbiQ	PF02361.16	gi|288560477|ref|YP_003423963.1|	-	0.5	9.9	31.2	0.17	11.5	16.0	3.0	3	0	0	3	3	3	0	Cobalt	transport	protein
UPF0242	PF06785.11	gi|288560477|ref|YP_003423963.1|	-	0.97	9.5	5.9	0.053	13.6	0.3	1.9	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0242)	N-terminus
Beta_helix	PF13229.6	gi|288560478|ref|YP_003423964.1|	-	1.3e-09	38.1	196.9	3.3e-06	27.0	29.1	9.2	4	2	3	8	8	8	5	Right	handed	beta	helix	region
NosD	PF05048.13	gi|288560478|ref|YP_003423964.1|	-	0.00012	21.4	19.6	0.00012	21.4	19.6	8.9	3	2	5	8	8	8	4	Periplasmic	copper-binding	protein	(NosD)
MG4	PF17789.1	gi|288560478|ref|YP_003423964.1|	-	0.19	11.9	0.8	0.82	9.9	0.0	2.6	2	0	0	2	2	2	0	Macroglobulin	domain	MG4
UvrC_HhH_N	PF08459.11	gi|288560479|ref|YP_003423965.1|	-	8.6e-46	155.6	0.1	3.8e-45	153.5	0.0	2.0	2	0	0	2	2	2	1	UvrC	Helix-hairpin-helix	N-terminal
GIY-YIG	PF01541.24	gi|288560479|ref|YP_003423965.1|	-	5.2e-13	49.1	1.2	5.2e-13	49.1	1.2	2.5	2	0	0	2	2	2	1	GIY-YIG	catalytic	domain
UVR	PF02151.19	gi|288560479|ref|YP_003423965.1|	-	6.3e-12	44.8	4.4	2.3e-11	43.0	4.4	2.1	1	0	0	1	1	1	1	UvrB/uvrC	motif
HHH_2	PF12826.7	gi|288560479|ref|YP_003423965.1|	-	1.9e-10	40.7	0.1	6.2e-09	35.8	0.0	2.7	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
HHH_5	PF14520.6	gi|288560479|ref|YP_003423965.1|	-	5.1e-07	30.2	0.0	1.6e-06	28.6	0.0	1.9	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
HHH	PF00633.23	gi|288560479|ref|YP_003423965.1|	-	0.019	14.8	0.0	0.47	10.4	0.0	2.6	2	0	0	2	2	2	0	Helix-hairpin-helix	motif
SpoIIAA-like	PF11964.8	gi|288560479|ref|YP_003423965.1|	-	0.05	14.6	1.0	0.29	12.2	0.2	2.8	2	0	0	2	2	2	0	SpoIIAA-like
5_3_exonuc	PF01367.20	gi|288560479|ref|YP_003423965.1|	-	0.31	11.7	5.4	1	10.0	0.0	4.1	4	1	0	4	4	4	0	5'-3'	exonuclease,	C-terminal	SAM	fold
AAA_17	PF13207.6	gi|288560480|ref|YP_003423966.1|	-	2.2e-12	47.5	0.1	3.3e-12	47.0	0.1	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.6	gi|288560480|ref|YP_003423966.1|	-	6.7e-12	46.1	0.1	1e-11	45.5	0.0	1.3	1	1	0	1	1	1	1	AAA	domain
ADK	PF00406.22	gi|288560480|ref|YP_003423966.1|	-	4.8e-06	26.8	0.0	5.8e-06	26.5	0.0	1.2	1	0	0	1	1	1	1	Adenylate	kinase
AAA_33	PF13671.6	gi|288560480|ref|YP_003423966.1|	-	2.9e-05	24.2	0.0	3.9e-05	23.8	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
CoaE	PF01121.20	gi|288560480|ref|YP_003423966.1|	-	0.00035	20.3	0.1	0.043	13.5	0.1	2.2	1	1	0	2	2	2	2	Dephospho-CoA	kinase
MeaB	PF03308.16	gi|288560480|ref|YP_003423966.1|	-	0.024	13.6	0.1	0.036	13.0	0.1	1.3	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
NTPase_1	PF03266.15	gi|288560480|ref|YP_003423966.1|	-	0.049	13.5	2.9	5.7	6.8	0.3	2.8	1	1	1	3	3	3	0	NTPase
P-mevalo_kinase	PF04275.14	gi|288560480|ref|YP_003423966.1|	-	0.075	13.0	0.1	0.15	12.0	0.1	1.8	1	1	0	1	1	1	0	Phosphomevalonate	kinase
PPS_PS	PF02006.16	gi|288560481|ref|YP_003423967.1|	-	2.1e-71	239.1	1.3	2.5e-71	238.9	1.3	1.1	1	0	0	1	1	1	1	Phosphopantothenate/pantothenate	synthetase
Thymidylate_kin	PF02223.17	gi|288560482|ref|YP_003423968.1|	-	8.8e-27	94.0	0.0	1e-26	93.8	0.0	1.0	1	0	0	1	1	1	1	Thymidylate	kinase
AAA_18	PF13238.6	gi|288560482|ref|YP_003423968.1|	-	8.6e-06	26.3	0.1	4.4e-05	24.0	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_17	PF13207.6	gi|288560482|ref|YP_003423968.1|	-	7.3e-05	23.2	0.1	0.035	14.5	0.0	2.5	2	1	0	2	2	2	2	AAA	domain
AAA_33	PF13671.6	gi|288560482|ref|YP_003423968.1|	-	0.0034	17.6	0.1	0.05	13.8	0.1	2.1	1	1	0	1	1	1	1	AAA	domain
dNK	PF01712.19	gi|288560482|ref|YP_003423968.1|	-	0.0037	17.1	0.2	0.081	12.8	0.1	2.1	2	0	0	2	2	2	1	Deoxynucleoside	kinase
ADK	PF00406.22	gi|288560482|ref|YP_003423968.1|	-	0.0076	16.4	0.3	0.3	11.2	0.0	2.3	2	1	0	2	2	2	1	Adenylate	kinase
Cytidylate_kin	PF02224.18	gi|288560482|ref|YP_003423968.1|	-	0.14	11.9	0.1	3.9	7.1	0.0	2.1	2	0	0	2	2	2	0	Cytidylate	kinase
ABC_tran	PF00005.27	gi|288560482|ref|YP_003423968.1|	-	0.16	12.5	0.0	0.16	12.5	0.0	1.4	1	1	0	1	1	1	0	ABC	transporter
AAA_22	PF13401.6	gi|288560482|ref|YP_003423968.1|	-	0.19	12.0	0.0	0.74	10.1	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
SseB	PF07179.12	gi|288560483|ref|YP_003423969.1|	-	3.7e-19	69.2	0.4	4.9e-19	68.8	0.4	1.1	1	0	0	1	1	1	1	SseB	protein	N-terminal	domain
DUF1002	PF06207.11	gi|288560484|ref|YP_003423970.1|	-	8.7e-56	188.9	21.4	1e-55	188.7	21.4	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1002)
Mitofilin	PF09731.9	gi|288560484|ref|YP_003423970.1|	-	0.0088	14.9	2.8	0.01	14.7	2.8	1.2	1	0	0	1	1	1	1	Mitochondrial	inner	membrane	protein
SpoVIF	PF14069.6	gi|288560484|ref|YP_003423970.1|	-	0.072	12.9	4.8	0.22	11.3	4.8	1.9	1	1	0	1	1	1	0	Stage	VI	sporulation	protein	F
LMBR1	PF04791.16	gi|288560484|ref|YP_003423970.1|	-	0.19	10.6	3.3	0.047	12.6	0.6	1.4	2	0	0	2	2	2	0	LMBR1-like	membrane	protein
SRP54_N	PF02881.19	gi|288560484|ref|YP_003423970.1|	-	0.26	11.6	3.5	0.23	11.7	1.1	2.2	2	1	0	2	2	2	0	SRP54-type	protein,	helical	bundle	domain
DUF4404	PF14357.6	gi|288560484|ref|YP_003423970.1|	-	1.1	9.9	6.1	5.7	7.7	0.7	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4404)
Diphthami_syn_2	PF01902.17	gi|288560487|ref|YP_003423973.1|	-	2.5e-77	259.3	0.4	2.9e-77	259.1	0.4	1.0	1	0	0	1	1	1	1	Diphthamide	synthase
QueC	PF06508.13	gi|288560487|ref|YP_003423973.1|	-	0.0043	16.6	0.0	0.011	15.3	0.0	1.6	1	1	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
MFS_1	PF07690.16	gi|288560488|ref|YP_003423974.1|	-	0.0074	15.3	5.5	0.008	15.1	3.4	1.9	2	0	0	2	2	2	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.24	gi|288560488|ref|YP_003423974.1|	-	0.064	12.1	5.5	0.11	11.3	5.5	1.3	1	0	0	1	1	1	0	Sugar	(and	other)	transporter
RA	PF00788.23	gi|288560488|ref|YP_003423974.1|	-	0.18	12.5	0.0	0.87	10.3	0.0	1.9	2	0	0	2	2	2	0	Ras	association	(RalGDS/AF-6)	domain
DUF5411	PF17424.2	gi|288560489|ref|YP_003423975.1|	-	0.016	15.2	0.2	0.024	14.6	0.2	1.2	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5411)
Class_IIIsignal	PF04021.12	gi|288560489|ref|YP_003423975.1|	-	0.11	12.5	5.3	0.48	10.5	5.3	2.0	1	1	0	1	1	1	0	Class	III	signal	peptide
Peptidase_A24	PF01478.18	gi|288560490|ref|YP_003423976.1|	-	1e-08	35.5	15.2	1e-08	35.5	15.2	2.2	1	1	1	2	2	2	1	Type	IV	leader	peptidase	family
Arc_PepC	PF06819.11	gi|288560490|ref|YP_003423976.1|	-	0.0017	18.4	0.3	0.0052	16.9	0.3	1.8	1	1	0	1	1	1	1	Archaeal	Peptidase	A24	C-terminal	Domain
Arc_PepC_II	PF06847.11	gi|288560490|ref|YP_003423976.1|	-	0.0019	18.6	0.6	0.0089	16.5	0.6	2.3	1	1	0	1	1	1	1	Archaeal	Peptidase	A24	C-terminus	Type	II
RHH_8	PF17723.1	gi|288560492|ref|YP_003423978.1|	-	0.00067	19.8	0.1	0.00099	19.3	0.1	1.4	1	0	0	1	1	1	1	Ribbon-Helix-Helix	transcriptional	regulator	family
DDRGK	PF09756.9	gi|288560492|ref|YP_003423978.1|	-	0.0028	17.3	1.3	0.005	16.5	1.3	1.4	1	0	0	1	1	1	1	DDRGK	domain
SID	PF11778.8	gi|288560492|ref|YP_003423978.1|	-	0.016	15.3	1.3	0.033	14.3	1.3	1.6	1	1	0	1	1	1	0	Septation	initiation
CTP_synth_N	PF06418.14	gi|288560493|ref|YP_003423979.1|	-	2.5e-122	407.3	0.2	3.3e-122	406.9	0.2	1.1	1	0	0	1	1	1	1	CTP	synthase	N-terminus
GATase	PF00117.28	gi|288560493|ref|YP_003423979.1|	-	6.4e-56	189.1	0.0	1.2e-55	188.3	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.13	gi|288560493|ref|YP_003423979.1|	-	2.4e-11	43.8	0.0	3.2e-10	40.2	0.0	2.4	1	1	1	2	2	2	1	Peptidase	C26
CbiA	PF01656.23	gi|288560493|ref|YP_003423979.1|	-	0.0015	18.6	0.0	0.0031	17.6	0.0	1.7	2	1	0	2	2	2	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
GATase_3	PF07685.14	gi|288560493|ref|YP_003423979.1|	-	0.0015	18.2	0.2	0.0033	17.0	0.2	1.6	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
YajC	PF02699.15	gi|288560493|ref|YP_003423979.1|	-	0.0021	17.9	0.0	0.011	15.6	0.0	2.3	1	0	0	1	1	1	1	Preprotein	translocase	subunit
DJ-1_PfpI	PF01965.24	gi|288560493|ref|YP_003423979.1|	-	0.12	12.1	0.0	0.83	9.4	0.0	2.4	3	0	0	3	3	3	0	DJ-1/PfpI	family
Fzo_mitofusin	PF04799.13	gi|288560494|ref|YP_003423980.1|	-	0.0077	15.8	1.3	0.0093	15.5	1.3	1.3	1	0	0	1	1	1	1	fzo-like	conserved	region
bZIP_1	PF00170.21	gi|288560494|ref|YP_003423980.1|	-	0.032	14.3	0.6	0.032	14.3	0.6	1.8	2	0	0	2	2	2	0	bZIP	transcription	factor
Snapin_Pallidin	PF14712.6	gi|288560494|ref|YP_003423980.1|	-	0.034	14.6	1.2	0.2	12.1	0.6	2.2	1	1	1	2	2	2	0	Snapin/Pallidin
FapA	PF03961.13	gi|288560494|ref|YP_003423980.1|	-	0.051	12.2	3.5	0.056	12.0	3.5	1.1	1	0	0	1	1	1	0	Flagellar	Assembly	Protein	A
Rootletin	PF15035.6	gi|288560494|ref|YP_003423980.1|	-	0.16	12.0	5.3	0.99	9.4	1.4	2.0	2	0	0	2	2	2	0	Ciliary	rootlet	component,	centrosome	cohesion
FlgT_M	PF16539.5	gi|288560495|ref|YP_003423981.1|	-	0.056	13.6	0.0	0.072	13.2	0.0	1.2	1	0	0	1	1	1	0	Flagellar	assembly	protein	T,	middle	domain
Guanylate_cyc_2	PF09778.9	gi|288560496|ref|YP_003423982.1|	-	0.039	13.3	0.3	0.059	12.7	0.3	1.3	1	0	0	1	1	1	0	Guanylylate	cyclase
DUF4145	PF13643.6	gi|288560497|ref|YP_003423983.1|	-	0.00017	21.7	0.3	0.00083	19.4	0.3	2.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4145)
MazG-like	PF12643.7	gi|288560498|ref|YP_003423984.1|	-	1.5e-17	63.7	0.2	2.4e-17	62.9	0.2	1.3	1	0	0	1	1	1	1	MazG-like	family
MazG	PF03819.17	gi|288560498|ref|YP_003423984.1|	-	4.6e-05	23.5	0.1	7.2e-05	22.9	0.1	1.3	1	0	0	1	1	1	1	MazG	nucleotide	pyrophosphohydrolase	domain
PRA-PH	PF01503.17	gi|288560498|ref|YP_003423984.1|	-	0.00011	22.6	0.2	0.00012	22.4	0.2	1.2	1	0	0	1	1	1	1	Phosphoribosyl-ATP	pyrophosphohydrolase
dUTPase_2	PF08761.11	gi|288560498|ref|YP_003423984.1|	-	0.0047	17.1	0.8	0.0054	16.9	0.8	1.1	1	0	0	1	1	1	1	dUTPase
Shikimate_dh_N	PF08501.11	gi|288560500|ref|YP_003423986.1|	-	1.6e-29	102.0	0.0	3.8e-29	100.8	0.0	1.7	1	0	0	1	1	1	1	Shikimate	dehydrogenase	substrate	binding	domain
SDH_C	PF18317.1	gi|288560500|ref|YP_003423986.1|	-	5.6e-12	45.2	0.1	9.6e-12	44.5	0.1	1.4	1	0	0	1	1	1	1	Shikimate	5'-dehydrogenase	C-terminal	domain
Shikimate_DH	PF01488.20	gi|288560500|ref|YP_003423986.1|	-	5.1e-10	39.6	0.6	3.4e-09	36.9	0.6	2.1	1	1	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
Ldh_1_N	PF00056.23	gi|288560500|ref|YP_003423986.1|	-	0.041	14.0	0.0	0.076	13.1	0.0	1.5	1	0	0	1	1	1	0	lactate/malate	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.17	gi|288560500|ref|YP_003423986.1|	-	0.045	14.3	0.3	0.12	13.0	0.3	1.7	1	1	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
Sacchrp_dh_NADP	PF03435.18	gi|288560500|ref|YP_003423986.1|	-	0.058	13.6	0.0	0.098	12.9	0.0	1.4	1	0	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
ThiF	PF00899.21	gi|288560500|ref|YP_003423986.1|	-	0.06	12.7	0.1	0.21	10.9	0.0	1.8	1	1	1	2	2	2	0	ThiF	family
RapH_N	PF18801.1	gi|288560500|ref|YP_003423986.1|	-	0.13	12.3	0.7	0.36	11.0	0.1	2.1	2	0	0	2	2	2	0	response	regulator	aspartate	phosphatase	H,	N	terminal
DUF2115	PF09888.9	gi|288560501|ref|YP_003423987.1|	-	2e-51	174.7	0.3	2.5e-51	174.5	0.3	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2115)
Big_3_5	PF16640.5	gi|288560502|ref|YP_003423988.1|	-	1.7e-27	95.4	39.2	2.8e-10	40.2	4.8	8.5	7	0	0	7	7	7	5	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|288560502|ref|YP_003423988.1|	-	5.9e-21	74.3	14.1	5.3e-07	29.6	2.0	5.9	5	0	0	5	5	5	4	Bacterial	Ig-like	domain	(group	1)
CarboxypepD_reg	PF13620.6	gi|288560502|ref|YP_003423988.1|	-	4.5e-13	49.3	19.2	0.0051	17.1	0.4	7.2	7	0	0	7	7	7	4	Carboxypeptidase	regulatory-like	domain
MG4	PF17789.1	gi|288560502|ref|YP_003423988.1|	-	2.9e-11	43.4	8.9	0.012	15.7	0.0	5.3	5	0	0	5	5	5	4	Macroglobulin	domain	MG4
Invasin_D3	PF09134.10	gi|288560502|ref|YP_003423988.1|	-	4.9e-10	39.6	35.5	9.7e-06	25.8	4.7	6.9	6	2	1	7	7	6	4	Invasin,	domain	3
DUF11	PF01345.18	gi|288560502|ref|YP_003423988.1|	-	2.5e-09	37.3	0.2	2.5e-09	37.3	0.2	3.8	4	0	0	4	4	3	1	Domain	of	unknown	function	DUF11
Beta_helix	PF13229.6	gi|288560502|ref|YP_003423988.1|	-	2.9e-06	27.2	75.1	7.7e-05	22.6	36.0	8.7	3	3	6	9	9	6	5	Right	handed	beta	helix	region
Chlam_PMP	PF02415.17	gi|288560502|ref|YP_003423988.1|	-	5.1e-05	23.5	97.2	0.18	12.4	2.8	16.5	17	0	0	17	17	15	5	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
Big_2	PF02368.18	gi|288560502|ref|YP_003423988.1|	-	0.00037	20.3	11.0	0.001	18.9	0.1	4.0	3	0	0	3	3	3	1	Bacterial	Ig-like	domain	(group	2)
CBM_X2	PF03442.14	gi|288560502|ref|YP_003423988.1|	-	0.004	17.2	9.2	0.016	15.3	0.5	4.7	3	0	0	3	3	3	1	Carbohydrate	binding	domain	X2
UXS1_N	PF11803.8	gi|288560502|ref|YP_003423988.1|	-	0.0078	16.6	0.1	0.052	13.9	0.0	2.3	2	0	0	2	2	2	1	UDP-glucuronate	decarboxylase	N-terminal
CarbopepD_reg_2	PF13715.6	gi|288560502|ref|YP_003423988.1|	-	0.011	15.7	29.2	0.13	12.3	0.6	6.3	7	0	0	7	7	7	0	CarboxypepD_reg-like	domain
DUF824	PF05688.11	gi|288560502|ref|YP_003423988.1|	-	0.029	14.2	1.6	8.7	6.3	0.1	3.7	3	0	0	3	3	3	0	Salmonella	repeat	of	unknown	function	(DUF824)
DUF4198	PF10670.9	gi|288560502|ref|YP_003423988.1|	-	0.076	13.4	0.8	3.2	8.1	0.1	3.3	3	1	1	4	4	4	0	Domain	of	unknown	function	(DUF4198)
Filamin	PF00630.19	gi|288560502|ref|YP_003423988.1|	-	0.14	13.0	6.9	7.3	7.5	3.0	4.4	2	1	0	2	2	2	0	Filamin/ABP280	repeat
CARDB	PF07705.11	gi|288560502|ref|YP_003423988.1|	-	0.61	10.4	18.2	0.013	15.8	6.0	4.4	3	1	0	3	3	3	0	CARDB
Big_3_5	PF16640.5	gi|288560503|ref|YP_003423989.1|	-	4.7e-20	71.6	45.7	3.5e-10	39.9	8.1	9.6	8	1	0	9	9	9	5	Bacterial	Ig-like	domain	(group	3)
DUF11	PF01345.18	gi|288560503|ref|YP_003423989.1|	-	6.3e-20	71.3	14.2	3.6e-12	46.4	1.6	3.5	3	0	0	3	3	3	2	Domain	of	unknown	function	DUF11
Big_1	PF02369.16	gi|288560503|ref|YP_003423989.1|	-	2.3e-15	56.4	9.3	1.1e-07	31.8	2.7	5.6	5	0	0	5	5	5	3	Bacterial	Ig-like	domain	(group	1)
Big_2	PF02368.18	gi|288560503|ref|YP_003423989.1|	-	2.8e-14	52.8	0.3	4.4e-08	32.9	0.0	6.1	7	0	0	7	7	7	2	Bacterial	Ig-like	domain	(group	2)
CarboxypepD_reg	PF13620.6	gi|288560503|ref|YP_003423989.1|	-	3.5e-11	43.2	12.2	0.013	15.8	0.1	5.8	5	0	0	5	5	5	3	Carboxypeptidase	regulatory-like	domain
MG4	PF17789.1	gi|288560503|ref|YP_003423989.1|	-	4.2e-09	36.4	0.3	0.0045	17.1	0.0	4.3	3	0	0	3	3	3	2	Macroglobulin	domain	MG4
Chlam_PMP	PF02415.17	gi|288560503|ref|YP_003423989.1|	-	1.3e-07	31.7	94.4	0.11	13.0	0.2	18.3	18	0	0	18	18	18	8	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
Invasin_D3	PF09134.10	gi|288560503|ref|YP_003423989.1|	-	7.2e-07	29.4	24.7	2.6e-05	24.5	6.9	6.2	6	0	0	6	6	6	2	Invasin,	domain	3
CARDB	PF07705.11	gi|288560503|ref|YP_003423989.1|	-	0.00072	19.8	8.8	0.00072	19.8	8.8	6.3	5	3	1	6	6	6	2	CARDB
DUF4198	PF10670.9	gi|288560503|ref|YP_003423989.1|	-	0.012	16.0	0.3	0.73	10.2	0.0	3.0	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4198)
TRAP_beta	PF05753.14	gi|288560503|ref|YP_003423989.1|	-	0.052	12.9	8.0	0.06	12.7	1.3	3.1	3	0	0	3	3	3	0	Translocon-associated	protein	beta	(TRAPB)
tRNA-synt_His	PF13393.6	gi|288560504|ref|YP_003423990.1|	-	1.9e-62	211.3	0.0	3.9e-62	210.3	0.0	1.5	2	0	0	2	2	2	1	Histidyl-tRNA	synthetase
tRNA-synt_2b	PF00587.25	gi|288560504|ref|YP_003423990.1|	-	1.1e-18	67.9	0.0	6.9e-18	65.2	0.0	2.1	1	1	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.20	gi|288560504|ref|YP_003423990.1|	-	1.3e-16	60.5	2.1	1.8e-16	60.1	0.7	1.9	2	0	0	2	2	2	1	Anticodon	binding	domain
tRNA-synt_2d	PF01409.20	gi|288560504|ref|YP_003423990.1|	-	8.7e-05	22.1	0.0	0.00018	21.1	0.0	1.5	1	0	0	1	1	1	1	tRNA	synthetases	class	II	core	domain	(F)
tRNA-synt_2	PF00152.20	gi|288560504|ref|YP_003423990.1|	-	0.00041	19.5	2.8	0.0027	16.9	0.1	2.8	3	1	1	4	4	4	1	tRNA	synthetases	class	II	(D,	K	and	N)
ApbA_C	PF08546.11	gi|288560504|ref|YP_003423990.1|	-	0.036	14.2	0.0	0.096	12.9	0.0	1.7	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA	C	terminal
PRA-CH	PF01502.18	gi|288560505|ref|YP_003423991.1|	-	3.2e-34	116.6	1.4	4.7e-34	116.1	1.4	1.2	1	0	0	1	1	1	1	Phosphoribosyl-AMP	cyclohydrolase
T2SSE	PF00437.20	gi|288560506|ref|YP_003423992.1|	-	4.6e-11	42.3	0.0	9.4e-11	41.3	0.0	1.5	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
KH_1	PF00013.29	gi|288560506|ref|YP_003423992.1|	-	1.7e-05	24.6	0.2	6.8e-05	22.6	0.2	2.1	1	0	0	1	1	1	1	KH	domain
PIN	PF01850.21	gi|288560506|ref|YP_003423992.1|	-	4.6e-05	23.9	0.2	0.00021	21.8	0.0	2.3	2	0	0	2	2	1	1	PIN	domain
Thymidylate_kin	PF02223.17	gi|288560506|ref|YP_003423992.1|	-	0.0011	18.7	0.9	0.0055	16.4	0.0	2.5	2	1	0	2	2	2	1	Thymidylate	kinase
AAA_5	PF07728.14	gi|288560506|ref|YP_003423992.1|	-	0.0022	18.0	0.0	0.0086	16.1	0.0	2.0	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.6	gi|288560506|ref|YP_003423992.1|	-	0.0029	18.0	0.0	0.0086	16.5	0.0	1.7	2	0	0	2	2	2	1	AAA	ATPase	domain
KH_4	PF13083.6	gi|288560506|ref|YP_003423992.1|	-	0.0032	17.3	0.1	0.012	15.5	0.1	2.1	1	0	0	1	1	1	1	KH	domain
ABC_tran	PF00005.27	gi|288560506|ref|YP_003423992.1|	-	0.0048	17.4	0.0	0.021	15.4	0.0	2.0	2	0	0	2	2	2	1	ABC	transporter
KH_2	PF07650.17	gi|288560506|ref|YP_003423992.1|	-	0.0078	16.0	3.0	0.013	15.4	0.8	2.5	2	0	0	2	2	2	1	KH	domain
RNA_helicase	PF00910.22	gi|288560506|ref|YP_003423992.1|	-	0.011	16.1	0.0	0.42	11.0	0.0	2.7	2	0	0	2	2	2	0	RNA	helicase
PIN_4	PF13638.6	gi|288560506|ref|YP_003423992.1|	-	0.016	15.5	0.0	0.016	15.5	0.0	2.3	3	0	0	3	3	1	0	PIN	domain
AAA_30	PF13604.6	gi|288560506|ref|YP_003423992.1|	-	0.018	14.8	0.0	0.041	13.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_18	PF13238.6	gi|288560506|ref|YP_003423992.1|	-	0.019	15.5	0.0	0.019	15.5	0.0	3.5	4	0	0	4	4	3	0	AAA	domain
Zeta_toxin	PF06414.12	gi|288560506|ref|YP_003423992.1|	-	0.025	13.9	0.0	0.062	12.6	0.0	1.6	1	0	0	1	1	1	0	Zeta	toxin
AAA_29	PF13555.6	gi|288560506|ref|YP_003423992.1|	-	0.031	14.0	0.0	0.078	12.7	0.0	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
Sigma54_activat	PF00158.26	gi|288560506|ref|YP_003423992.1|	-	0.037	13.7	0.0	0.073	12.8	0.0	1.4	1	0	0	1	1	1	0	Sigma-54	interaction	domain
U1snRNP70_N	PF12220.8	gi|288560506|ref|YP_003423992.1|	-	0.047	14.3	1.3	0.047	14.3	1.3	2.0	2	0	0	2	2	1	0	U1	small	nuclear	ribonucleoprotein	of	70kDa	MW	N	terminal
AAA_22	PF13401.6	gi|288560506|ref|YP_003423992.1|	-	0.057	13.7	0.0	0.13	12.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Rad17	PF03215.15	gi|288560506|ref|YP_003423992.1|	-	0.06	13.3	0.0	0.14	12.1	0.0	1.6	1	0	0	1	1	1	0	Rad17	P-loop	domain
AAA	PF00004.29	gi|288560506|ref|YP_003423992.1|	-	0.074	13.5	0.0	0.18	12.2	0.0	1.7	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
MeaB	PF03308.16	gi|288560506|ref|YP_003423992.1|	-	0.077	12.0	0.0	0.15	11.1	0.0	1.4	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
TsaE	PF02367.17	gi|288560506|ref|YP_003423992.1|	-	0.082	12.9	0.0	0.2	11.7	0.0	1.6	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
PIN_9	PF18477.1	gi|288560506|ref|YP_003423992.1|	-	0.085	13.2	6.9	0.15	12.3	0.5	3.7	3	1	0	3	3	2	0	PIN	like	domain
AAA_33	PF13671.6	gi|288560506|ref|YP_003423992.1|	-	0.11	12.7	0.1	0.56	10.4	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
IstB_IS21	PF01695.17	gi|288560506|ref|YP_003423992.1|	-	0.11	12.3	0.0	0.23	11.2	0.0	1.5	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
Viral_helicase1	PF01443.18	gi|288560506|ref|YP_003423992.1|	-	0.11	12.2	0.0	0.2	11.3	0.0	1.4	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
NACHT	PF05729.12	gi|288560506|ref|YP_003423992.1|	-	0.17	11.8	0.0	0.32	10.9	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
AP_endonuc_2	PF01261.24	gi|288560507|ref|YP_003423993.1|	-	1.7e-24	86.5	0.1	2.6e-24	85.8	0.1	1.3	1	0	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
DUF1825	PF08855.10	gi|288560507|ref|YP_003423993.1|	-	0.12	12.3	0.6	3.5	7.6	0.0	2.4	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF1825)
AP_endonuc_2	PF01261.24	gi|288560508|ref|YP_003423994.1|	-	8.2e-23	80.9	0.1	2.6e-22	79.3	0.1	1.7	2	0	0	2	2	2	1	Xylose	isomerase-like	TIM	barrel
AMP-binding_C_2	PF14535.6	gi|288560509|ref|YP_003423995.1|	-	6.2e-30	103.4	1.2	3e-29	101.2	0.6	2.2	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
AMP-binding	PF00501.28	gi|288560509|ref|YP_003423995.1|	-	6.3e-13	48.1	0.1	9.6e-13	47.5	0.1	1.3	1	0	0	1	1	1	1	AMP-binding	enzyme
ACT	PF01842.25	gi|288560510|ref|YP_003423996.1|	-	1.8e-07	30.8	0.0	0.014	15.1	0.0	2.2	2	0	0	2	2	2	2	ACT	domain
ACT_4	PF13291.6	gi|288560510|ref|YP_003423996.1|	-	0.00013	22.5	0.2	0.18	12.4	0.1	2.2	2	0	0	2	2	2	2	ACT	domain
FliS	PF02561.14	gi|288560510|ref|YP_003423996.1|	-	0.1	12.9	0.6	0.28	11.5	0.6	1.7	1	1	0	1	1	1	0	Flagellar	protein	FliS
Ldh_1_N	PF00056.23	gi|288560511|ref|YP_003423997.1|	-	7.3e-37	126.6	0.6	1.4e-36	125.7	0.6	1.5	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	NAD	binding	domain
Ldh_1_C	PF02866.18	gi|288560511|ref|YP_003423997.1|	-	1.8e-23	83.3	0.0	2.7e-23	82.7	0.0	1.3	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	alpha/beta	C-terminal	domain
Semialdhyde_dh	PF01118.24	gi|288560511|ref|YP_003423997.1|	-	0.00063	20.2	0.0	0.0014	19.1	0.0	1.6	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Epimerase	PF01370.21	gi|288560511|ref|YP_003423997.1|	-	0.01	15.3	0.1	0.028	13.9	0.0	1.7	2	0	0	2	2	2	0	NAD	dependent	epimerase/dehydratase	family
UDPG_MGDP_dh_N	PF03721.14	gi|288560511|ref|YP_003423997.1|	-	0.012	15.2	1.3	0.017	14.7	0.4	1.7	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Glyco_hydro_4	PF02056.16	gi|288560511|ref|YP_003423997.1|	-	0.019	14.5	0.0	0.046	13.3	0.0	1.6	1	0	0	1	1	1	0	Family	4	glycosyl	hydrolase
ABC_tran	PF00005.27	gi|288560512|ref|YP_003423998.1|	-	7.3e-21	75.1	0.6	5.6e-07	30.1	0.1	4.3	3	1	0	3	3	3	3	ABC	transporter
UvrA_DNA-bind	PF17755.1	gi|288560512|ref|YP_003423998.1|	-	2.6e-12	47.0	1.8	7.6e-12	45.6	0.1	2.7	3	0	0	3	3	2	1	UvrA	DNA-binding	domain
AAA_15	PF13175.6	gi|288560512|ref|YP_003423998.1|	-	3.1e-10	40.3	8.3	0.0024	17.7	0.2	4.5	4	1	0	4	4	4	2	AAA	ATPase	domain
SMC_N	PF02463.19	gi|288560512|ref|YP_003423998.1|	-	2.6e-09	36.9	0.0	0.14	11.5	0.0	4.1	3	1	1	4	4	4	2	RecF/RecN/SMC	N	terminal	domain
AAA_21	PF13304.6	gi|288560512|ref|YP_003423998.1|	-	3.6e-08	33.6	3.8	0.015	15.1	0.0	4.3	4	0	0	4	4	4	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
DnaJ_CXXCXGXG	PF00684.19	gi|288560512|ref|YP_003423998.1|	-	1.8e-07	31.4	6.2	0.0019	18.6	0.1	3.4	3	0	0	3	3	3	2	DnaJ	central	domain
AAA_29	PF13555.6	gi|288560512|ref|YP_003423998.1|	-	3.5e-06	26.7	0.2	0.074	12.8	0.1	2.6	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.6	gi|288560512|ref|YP_003423998.1|	-	4.8e-06	27.1	0.5	0.082	13.3	0.1	2.7	2	1	0	2	2	2	2	AAA	ATPase	domain
ATPase	PF06745.13	gi|288560512|ref|YP_003423998.1|	-	2.5e-05	23.7	0.0	0.14	11.5	0.0	2.6	2	0	0	2	2	2	2	KaiC
AAA_22	PF13401.6	gi|288560512|ref|YP_003423998.1|	-	8.2e-05	22.9	0.3	0.22	11.8	0.0	3.6	3	1	0	3	3	3	1	AAA	domain
AAA_25	PF13481.6	gi|288560512|ref|YP_003423998.1|	-	0.0001	21.9	0.1	0.5	9.9	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
HypA	PF01155.19	gi|288560512|ref|YP_003423998.1|	-	0.00014	21.8	0.4	0.7	9.9	0.1	3.0	3	0	0	3	3	3	2	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Anti-TRAP	PF15777.5	gi|288560512|ref|YP_003423998.1|	-	0.00014	21.7	9.7	0.94	9.5	0.2	3.7	3	1	1	4	4	4	2	Tryptophan	RNA-binding	attenuator	protein	inhibitory	protein
Viral_helicase1	PF01443.18	gi|288560512|ref|YP_003423998.1|	-	0.00031	20.6	0.0	0.069	12.9	0.0	2.4	2	0	0	2	2	2	1	Viral	(Superfamily	1)	RNA	helicase
RsgA_GTPase	PF03193.16	gi|288560512|ref|YP_003423998.1|	-	0.00038	20.4	0.2	0.81	9.6	0.0	2.6	2	0	0	2	2	2	2	RsgA	GTPase
DUF2075	PF09848.9	gi|288560512|ref|YP_003423998.1|	-	0.0004	19.7	0.1	0.37	10.0	0.0	2.3	2	0	0	2	2	2	2	Uncharacterized	conserved	protein	(DUF2075)
AAA_33	PF13671.6	gi|288560512|ref|YP_003423998.1|	-	0.00048	20.3	0.0	1	9.5	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_23	PF13476.6	gi|288560512|ref|YP_003423998.1|	-	0.00057	20.4	1.2	0.17	12.3	0.1	3.2	3	0	0	3	3	3	1	AAA	domain
TackOD1	PF18551.1	gi|288560512|ref|YP_003423998.1|	-	0.0039	16.9	6.7	0.16	11.6	0.0	3.5	3	1	0	3	3	3	1	Thaumarchaeal	output	domain	1
Zn-ribbon_8	PF09723.10	gi|288560512|ref|YP_003423998.1|	-	0.005	16.9	8.7	0.18	12.0	0.3	3.6	3	1	0	3	3	3	1	Zinc	ribbon	domain
cobW	PF02492.19	gi|288560512|ref|YP_003423998.1|	-	0.0062	16.1	0.5	0.082	12.5	0.0	2.4	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_14	PF13173.6	gi|288560512|ref|YP_003423998.1|	-	0.0074	16.3	0.1	1.3	9.1	0.0	3.3	3	0	0	3	3	3	1	AAA	domain
NACHT	PF05729.12	gi|288560512|ref|YP_003423998.1|	-	0.0076	16.2	1.3	2.2	8.2	0.1	2.6	3	0	0	3	3	2	1	NACHT	domain
AAA_24	PF13479.6	gi|288560512|ref|YP_003423998.1|	-	0.011	15.5	0.5	1.9	8.1	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
AAA_18	PF13238.6	gi|288560512|ref|YP_003423998.1|	-	0.011	16.2	0.0	9.6	6.8	0.0	2.9	2	0	0	2	2	2	0	AAA	domain
RecA	PF00154.21	gi|288560512|ref|YP_003423998.1|	-	0.012	15.1	0.4	2.9	7.3	0.0	2.5	3	0	0	3	3	2	0	recA	bacterial	DNA	recombination	protein
SRPRB	PF09439.10	gi|288560512|ref|YP_003423998.1|	-	0.017	14.5	0.5	0.17	11.3	0.2	2.3	2	0	0	2	2	2	0	Signal	recognition	particle	receptor	beta	subunit
T2SSE	PF00437.20	gi|288560512|ref|YP_003423998.1|	-	0.066	12.3	0.4	0.21	10.6	0.1	1.9	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
Zeta_toxin	PF06414.12	gi|288560512|ref|YP_003423998.1|	-	0.14	11.4	0.2	23	4.2	0.1	2.7	2	0	0	2	2	2	0	Zeta	toxin
CbiA	PF01656.23	gi|288560512|ref|YP_003423998.1|	-	0.17	11.9	3.9	4.5	7.4	0.2	3.3	4	0	0	4	4	2	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
zf-TFIIB	PF13453.6	gi|288560512|ref|YP_003423998.1|	-	1.6	8.1	9.1	13	5.3	1.7	3.8	3	0	0	3	3	3	0	Transcription	factor	zinc-finger
AAA_30	PF13604.6	gi|288560512|ref|YP_003423998.1|	-	1.7	8.4	3.4	4.6	6.9	0.1	3.0	4	0	0	4	4	3	0	AAA	domain
TF_Zn_Ribbon	PF08271.12	gi|288560512|ref|YP_003423998.1|	-	8.7	5.9	12.5	12	5.5	0.1	4.5	5	0	0	5	5	4	0	TFIIB	zinc-binding
zinc_ribbon_9	PF14369.6	gi|288560512|ref|YP_003423998.1|	-	8.8	6.7	9.8	18	5.7	0.1	3.7	4	0	0	4	4	3	0	zinc-ribbon
Ferritin	PF00210.24	gi|288560513|ref|YP_003423999.1|	-	4.8e-43	146.5	6.5	5.5e-43	146.3	6.5	1.0	1	0	0	1	1	1	1	Ferritin-like	domain
Lipoprotein_10	PF03202.13	gi|288560513|ref|YP_003423999.1|	-	0.043	14.3	1.3	0.079	13.4	0.5	1.8	2	0	0	2	2	2	0	Putative	mycoplasma	lipoprotein,	C-terminal	region
Rubredoxin	PF00301.20	gi|288560514|ref|YP_003424000.1|	-	8e-24	83.4	4.1	8.6e-24	83.3	4.1	1.0	1	0	0	1	1	1	1	Rubredoxin
PhnA_Zn_Ribbon	PF08274.12	gi|288560514|ref|YP_003424000.1|	-	0.00082	19.3	0.7	0.72	9.9	0.1	2.2	2	0	0	2	2	2	2	PhnA	Zinc-Ribbon
PHD_4	PF16866.5	gi|288560514|ref|YP_003424000.1|	-	0.007	16.4	0.3	0.0095	16.0	0.3	1.3	1	1	0	1	1	1	1	PHD-finger
zf-Sec23_Sec24	PF04810.15	gi|288560514|ref|YP_003424000.1|	-	0.015	15.4	0.1	0.61	10.2	0.0	2.1	2	0	0	2	2	2	0	Sec23/Sec24	zinc	finger
zf-RanBP	PF00641.18	gi|288560514|ref|YP_003424000.1|	-	0.018	14.3	2.0	0.14	11.5	0.3	2.1	2	0	0	2	2	2	0	Zn-finger	in	Ran	binding	protein	and	others
HypA	PF01155.19	gi|288560514|ref|YP_003424000.1|	-	0.019	15.0	0.0	0.02	14.9	0.0	1.0	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Vps36-NZF-N	PF16988.5	gi|288560514|ref|YP_003424000.1|	-	0.028	13.8	0.2	1.9	7.9	0.0	2.1	2	0	0	2	2	2	0	Vacuolar	protein	sorting	36	NZF-N	zinc-finger	domain
zf-piccolo	PF05715.13	gi|288560514|ref|YP_003424000.1|	-	0.029	14.5	0.2	1.3	9.2	0.1	2.1	2	0	0	2	2	2	0	Piccolo	Zn-finger
Rubredoxin_2	PF18073.1	gi|288560514|ref|YP_003424000.1|	-	0.079	12.7	3.6	1.1	9.1	0.2	2.1	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
Zn-ribbon_8	PF09723.10	gi|288560514|ref|YP_003424000.1|	-	0.088	12.9	2.2	0.72	10.0	2.2	1.9	1	1	0	1	1	1	0	Zinc	ribbon	domain
zf-ribbon_3	PF13248.6	gi|288560514|ref|YP_003424000.1|	-	0.094	12.2	2.1	2.8	7.5	0.1	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-C2H2_4	PF13894.6	gi|288560514|ref|YP_003424000.1|	-	0.12	13.3	1.0	14	6.8	0.1	2.2	2	0	0	2	2	2	0	C2H2-type	zinc	finger
zf-H2C2_2	PF13465.6	gi|288560514|ref|YP_003424000.1|	-	0.13	12.7	1.3	8.9	6.9	0.1	2.1	2	0	0	2	2	2	0	Zinc-finger	double	domain
ADK_lid	PF05191.14	gi|288560514|ref|YP_003424000.1|	-	0.15	12.1	1.6	10	6.2	0.1	2.2	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
zf-NADH-PPase	PF09297.11	gi|288560514|ref|YP_003424000.1|	-	0.18	11.5	1.2	8	6.2	0.0	2.2	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
zf-C2H2_3	PF13878.6	gi|288560514|ref|YP_003424000.1|	-	0.19	11.6	0.2	5.1	7.0	0.1	2.1	2	0	0	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
RbpA	PF13397.6	gi|288560514|ref|YP_003424000.1|	-	0.21	12.2	0.2	0.26	11.9	0.1	1.4	1	1	1	2	2	2	0	RNA	polymerase-binding	protein
zf-C2H2	PF00096.26	gi|288560514|ref|YP_003424000.1|	-	0.29	11.7	1.8	5.2	7.7	0.3	2.2	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
zf-C2H2_6	PF13912.6	gi|288560514|ref|YP_003424000.1|	-	0.41	10.7	1.6	2.8	8.1	0.4	2.0	2	0	0	2	2	2	0	C2H2-type	zinc	finger
UPF0547	PF10571.9	gi|288560514|ref|YP_003424000.1|	-	1.4	9.1	4.7	8.8	6.5	0.3	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
Rubredoxin	PF00301.20	gi|288560515|ref|YP_003424001.1|	-	4e-21	74.8	1.0	4.4e-21	74.6	1.0	1.0	1	0	0	1	1	1	1	Rubredoxin
zf-H2C2_2	PF13465.6	gi|288560515|ref|YP_003424001.1|	-	0.0071	16.7	0.7	1.6	9.3	0.1	2.2	2	0	0	2	2	2	1	Zinc-finger	double	domain
Elf1	PF05129.13	gi|288560515|ref|YP_003424001.1|	-	0.0077	16.3	0.8	0.39	10.8	0.0	2.0	1	1	1	2	2	2	1	Transcription	elongation	factor	Elf1	like
zf-C2H2_4	PF13894.6	gi|288560515|ref|YP_003424001.1|	-	0.012	16.4	1.9	3	8.9	0.1	2.2	2	0	0	2	2	2	0	C2H2-type	zinc	finger
zf-C2H2	PF00096.26	gi|288560515|ref|YP_003424001.1|	-	0.014	15.8	2.4	2.1	9.0	0.3	2.2	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
TF_Zn_Ribbon	PF08271.12	gi|288560515|ref|YP_003424001.1|	-	0.016	14.7	5.5	0.54	9.8	0.5	2.4	1	1	1	2	2	2	0	TFIIB	zinc-binding
zf-C2H2_6	PF13912.6	gi|288560515|ref|YP_003424001.1|	-	0.017	15.1	0.7	1.2	9.2	0.2	2.1	2	0	0	2	2	2	0	C2H2-type	zinc	finger
Desulfoferrod_N	PF06397.12	gi|288560515|ref|YP_003424001.1|	-	0.067	12.8	0.4	3.8	7.2	0.2	2.1	2	0	0	2	2	2	0	Desulfoferrodoxin,	N-terminal	domain
Zn-C2H2_12	PF18112.1	gi|288560515|ref|YP_003424001.1|	-	0.085	13.3	0.3	5.4	7.6	0.1	2.2	2	0	0	2	2	2	0	Autophagy	receptor	zinc	finger-C2H2	domain
HypA	PF01155.19	gi|288560515|ref|YP_003424001.1|	-	0.089	12.8	0.1	0.12	12.3	0.1	1.3	1	1	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Lar_restr_allev	PF14354.6	gi|288560515|ref|YP_003424001.1|	-	0.13	12.6	1.3	3	8.3	0.1	2.1	2	0	0	2	2	2	0	Restriction	alleviation	protein	Lar
zf-C2H2_3	PF13878.6	gi|288560515|ref|YP_003424001.1|	-	0.16	11.8	0.9	2.2	8.2	0.2	2.1	2	0	0	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
zf-ribbon_3	PF13248.6	gi|288560515|ref|YP_003424001.1|	-	0.19	11.2	2.7	2.3	7.8	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-Mss51	PF13824.6	gi|288560515|ref|YP_003424001.1|	-	0.26	11.4	2.9	3.2	7.9	0.1	2.1	1	1	1	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
UPF0547	PF10571.9	gi|288560515|ref|YP_003424001.1|	-	0.42	10.7	4.6	3.7	7.7	0.1	2.6	3	0	0	3	3	3	0	Uncharacterised	protein	family	UPF0547
FMN_red	PF03358.15	gi|288560516|ref|YP_003424002.1|	-	4.6e-17	62.2	0.0	5.4e-17	62.0	0.0	1.1	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.17	gi|288560516|ref|YP_003424002.1|	-	5.9e-08	32.7	0.0	8.1e-08	32.2	0.0	1.2	1	0	0	1	1	1	1	Flavodoxin-like	fold
Usp	PF00582.26	gi|288560517|ref|YP_003424003.1|	-	1.1e-14	55.1	0.2	1.5e-14	54.7	0.2	1.1	1	0	0	1	1	1	1	Universal	stress	protein	family
DUF4869	PF16163.5	gi|288560517|ref|YP_003424003.1|	-	0.069	12.9	0.0	0.13	12.0	0.0	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4869)
ABC_tran	PF00005.27	gi|288560518|ref|YP_003424004.1|	-	8.2e-53	178.6	0.0	8.5e-26	91.1	0.0	2.6	2	1	0	2	2	2	2	ABC	transporter
AAA_21	PF13304.6	gi|288560518|ref|YP_003424004.1|	-	1.5e-17	64.4	1.8	7.7e-07	29.2	0.2	4.3	3	1	0	3	3	3	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|288560518|ref|YP_003424004.1|	-	3.2e-10	39.8	0.5	0.0014	18.1	0.0	3.9	2	2	1	4	4	4	2	RecF/RecN/SMC	N	terminal	domain
AAA_22	PF13401.6	gi|288560518|ref|YP_003424004.1|	-	1.8e-08	34.8	1.8	0.064	13.5	0.0	3.9	4	0	0	4	4	4	2	AAA	domain
AAA_16	PF13191.6	gi|288560518|ref|YP_003424004.1|	-	1.2e-06	29.0	0.3	0.097	13.1	0.0	2.9	2	1	0	2	2	2	2	AAA	ATPase	domain
RsgA_GTPase	PF03193.16	gi|288560518|ref|YP_003424004.1|	-	1.3e-06	28.4	0.2	0.072	13.0	0.0	2.8	3	0	0	3	3	2	2	RsgA	GTPase
AAA_25	PF13481.6	gi|288560518|ref|YP_003424004.1|	-	3.3e-06	26.8	0.4	5.2	6.6	0.1	4.5	4	1	0	4	4	4	0	AAA	domain
AAA_29	PF13555.6	gi|288560518|ref|YP_003424004.1|	-	6.9e-06	25.7	0.5	0.08	12.7	0.1	2.6	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
AAA_18	PF13238.6	gi|288560518|ref|YP_003424004.1|	-	1.4e-05	25.7	0.1	0.075	13.6	0.0	3.2	3	0	0	3	3	2	2	AAA	domain
MobB	PF03205.14	gi|288560518|ref|YP_003424004.1|	-	1.6e-05	24.8	0.4	0.0073	16.2	0.0	2.6	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
TniB	PF05621.11	gi|288560518|ref|YP_003424004.1|	-	5e-05	22.8	1.7	0.14	11.5	0.1	4.2	4	0	0	4	4	4	1	Bacterial	TniB	protein
AAA_28	PF13521.6	gi|288560518|ref|YP_003424004.1|	-	0.00014	22.1	0.0	0.21	11.8	0.0	2.7	2	0	0	2	2	2	1	AAA	domain
AAA_30	PF13604.6	gi|288560518|ref|YP_003424004.1|	-	0.00017	21.4	0.2	1.2	8.8	0.0	3.1	3	0	0	3	3	3	2	AAA	domain
Rad17	PF03215.15	gi|288560518|ref|YP_003424004.1|	-	0.00027	20.9	0.0	1	9.2	0.0	3.0	3	0	0	3	3	3	2	Rad17	P-loop	domain
AAA_15	PF13175.6	gi|288560518|ref|YP_003424004.1|	-	0.00029	20.7	0.3	0.15	11.7	0.2	3.7	2	1	2	4	4	4	1	AAA	ATPase	domain
NB-ARC	PF00931.22	gi|288560518|ref|YP_003424004.1|	-	0.00033	19.9	0.1	0.45	9.7	0.0	2.7	3	0	0	3	3	3	2	NB-ARC	domain
AAA	PF00004.29	gi|288560518|ref|YP_003424004.1|	-	0.00036	21.0	0.2	12	6.3	0.0	4.5	4	1	0	4	4	4	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_23	PF13476.6	gi|288560518|ref|YP_003424004.1|	-	0.00036	21.1	4.3	0.27	11.7	1.4	3.1	2	2	0	2	2	2	2	AAA	domain
SbcCD_C	PF13558.6	gi|288560518|ref|YP_003424004.1|	-	0.0004	20.5	3.1	0.075	13.3	0.0	4.3	4	2	0	4	4	3	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_24	PF13479.6	gi|288560518|ref|YP_003424004.1|	-	0.00057	19.7	0.2	1.8	8.3	0.0	3.2	3	0	0	3	3	3	1	AAA	domain
ATPase_2	PF01637.18	gi|288560518|ref|YP_003424004.1|	-	0.00061	19.8	0.5	0.53	10.2	0.3	2.7	2	2	0	2	2	2	1	ATPase	domain	predominantly	from	Archaea
AAA_33	PF13671.6	gi|288560518|ref|YP_003424004.1|	-	0.00068	19.8	0.0	1.9	8.6	0.0	2.9	3	0	0	3	3	2	2	AAA	domain
cobW	PF02492.19	gi|288560518|ref|YP_003424004.1|	-	0.0024	17.5	1.9	1.6	8.3	0.1	3.0	3	0	0	3	3	3	2	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_13	PF13166.6	gi|288560518|ref|YP_003424004.1|	-	0.0025	16.6	1.6	0.26	9.9	0.1	2.4	3	0	0	3	3	3	1	AAA	domain
TsaE	PF02367.17	gi|288560518|ref|YP_003424004.1|	-	0.0053	16.7	0.1	1.3	9.0	0.0	2.5	2	0	0	2	2	2	1	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
Roc	PF08477.13	gi|288560518|ref|YP_003424004.1|	-	0.0064	16.7	0.2	1.8	8.8	0.0	2.6	2	0	0	2	2	2	1	Ras	of	Complex,	Roc,	domain	of	DAPkinase
AAA_14	PF13173.6	gi|288560518|ref|YP_003424004.1|	-	0.01	15.9	0.1	15	5.6	0.0	3.5	3	0	0	3	3	3	0	AAA	domain
PhoH	PF02562.16	gi|288560518|ref|YP_003424004.1|	-	0.016	14.7	0.0	3.8	6.9	0.0	2.6	2	0	0	2	2	2	0	PhoH-like	protein
KdpD	PF02702.17	gi|288560518|ref|YP_003424004.1|	-	0.017	14.6	1.3	3.2	7.2	0.5	2.6	2	0	0	2	2	2	0	Osmosensitive	K+	channel	His	kinase	sensor	domain
PduV-EutP	PF10662.9	gi|288560518|ref|YP_003424004.1|	-	0.017	14.9	0.1	2	8.1	0.1	2.5	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_17	PF13207.6	gi|288560518|ref|YP_003424004.1|	-	0.019	15.4	1.2	3.5	8.0	0.0	3.3	3	1	1	4	4	2	0	AAA	domain
NACHT	PF05729.12	gi|288560518|ref|YP_003424004.1|	-	0.02	14.8	3.7	1.9	8.4	0.3	2.8	2	0	0	2	2	2	0	NACHT	domain
MMR_HSR1	PF01926.23	gi|288560518|ref|YP_003424004.1|	-	0.039	14.0	1.4	2.8	8.1	0.4	3.3	2	1	0	2	2	2	0	50S	ribosome-binding	GTPase
Pox_A32	PF04665.12	gi|288560518|ref|YP_003424004.1|	-	0.045	13.2	0.5	3.7	6.9	0.0	2.4	2	0	0	2	2	2	0	Poxvirus	A32	protein
ATPase	PF06745.13	gi|288560518|ref|YP_003424004.1|	-	0.07	12.5	1.2	30	3.9	0.1	3.9	4	0	0	4	4	4	0	KaiC
IstB_IS21	PF01695.17	gi|288560518|ref|YP_003424004.1|	-	0.071	12.8	0.2	3.4	7.3	0.0	2.9	3	0	0	3	3	3	0	IstB-like	ATP	binding	protein
Zeta_toxin	PF06414.12	gi|288560518|ref|YP_003424004.1|	-	0.083	12.2	0.0	11	5.2	0.0	2.8	2	0	0	2	2	2	0	Zeta	toxin
PRK	PF00485.18	gi|288560518|ref|YP_003424004.1|	-	0.093	12.5	0.1	2.4	7.9	0.0	2.3	2	0	0	2	2	2	0	Phosphoribulokinase	/	Uridine	kinase	family
T2SSE	PF00437.20	gi|288560518|ref|YP_003424004.1|	-	0.1	11.7	0.1	6.4	5.7	0.0	2.6	3	0	0	3	3	3	0	Type	II/IV	secretion	system	protein
DLIC	PF05783.11	gi|288560518|ref|YP_003424004.1|	-	0.1	11.4	0.3	1.3	7.8	0.1	2.4	3	0	0	3	3	3	0	Dynein	light	intermediate	chain	(DLIC)
AAA_5	PF07728.14	gi|288560518|ref|YP_003424004.1|	-	0.13	12.3	0.5	30	4.6	0.0	3.3	3	0	0	3	3	3	0	AAA	domain	(dynein-related	subfamily)
Alpha-amyl_C2	PF07821.12	gi|288560518|ref|YP_003424004.1|	-	0.16	12.2	0.0	0.35	11.1	0.0	1.5	1	0	0	1	1	1	0	Alpha-amylase	C-terminal	beta-sheet	domain
Mg_chelatase	PF01078.21	gi|288560518|ref|YP_003424004.1|	-	0.17	11.3	0.1	7.5	5.9	0.0	2.5	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
AAA_19	PF13245.6	gi|288560518|ref|YP_003424004.1|	-	0.2	12.0	1.3	13	6.1	0.0	2.9	3	0	0	3	3	2	0	AAA	domain
ABC_ATPase	PF09818.9	gi|288560518|ref|YP_003424004.1|	-	0.57	8.9	3.3	5.9	5.6	0.0	2.7	3	0	0	3	3	3	0	Predicted	ATPase	of	the	ABC	class
Chlam_PMP	PF02415.17	gi|288560519|ref|YP_003424005.1|	-	0.003	17.9	8.8	0.014	15.8	0.5	19.5	18	1	0	18	18	18	10	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
DisA_N	PF02457.16	gi|288560519|ref|YP_003424005.1|	-	0.081	12.5	1.7	5.9	6.5	0.1	3.9	2	1	0	3	3	3	0	DisA	bacterial	checkpoint	controller	nucleotide-binding
Band_3_cyto	PF07565.13	gi|288560519|ref|YP_003424005.1|	-	0.89	9.3	6.8	2.2	8.0	6.8	1.7	1	0	0	1	1	1	0	Band	3	cytoplasmic	domain
Nop14	PF04147.12	gi|288560519|ref|YP_003424005.1|	-	2.8	6.0	17.7	4	5.5	17.7	1.1	1	0	0	1	1	1	0	Nop14-like	family
SOBP	PF15279.6	gi|288560519|ref|YP_003424005.1|	-	5.1	7.6	19.8	11	6.6	19.8	1.4	1	0	0	1	1	1	0	Sine	oculis-binding	protein
Glycos_transf_2	PF00535.26	gi|288560520|ref|YP_003424006.1|	-	9.3e-23	80.9	0.9	1.3e-22	80.4	0.2	1.6	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|288560520|ref|YP_003424006.1|	-	4.6e-11	43.1	0.0	7.1e-11	42.4	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.9	gi|288560520|ref|YP_003424006.1|	-	4.1e-07	29.7	0.4	4.1e-07	29.7	0.4	1.6	2	0	0	2	2	2	1	Glycosyltransferase	like	family	2
ZapB	PF06005.12	gi|288560520|ref|YP_003424006.1|	-	0.38	11.2	8.3	0.85	10.1	8.3	1.6	1	1	0	1	1	1	0	Cell	division	protein	ZapB
Cnn_1N	PF07989.11	gi|288560520|ref|YP_003424006.1|	-	0.55	10.4	7.7	0.26	11.5	3.1	2.3	2	0	0	2	2	2	0	Centrosomin	N-terminal	motif	1
DUF447	PF04289.12	gi|288560521|ref|YP_003424007.1|	-	4.1e-38	130.9	1.0	4.7e-38	130.7	1.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF447)
Rubredoxin_C	PF18267.1	gi|288560521|ref|YP_003424007.1|	-	0.063	13.2	0.4	0.14	12.1	0.4	1.6	1	0	0	1	1	1	0	Rubredoxin	NAD+	reductase	C-terminal	domain
Radical_SAM	PF04055.21	gi|288560522|ref|YP_003424008.1|	-	1.3e-20	74.4	0.1	1.8e-20	73.9	0.1	1.2	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|288560522|ref|YP_003424008.1|	-	0.028	14.6	0.0	0.081	13.1	0.0	1.8	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.6	gi|288560522|ref|YP_003424008.1|	-	0.1	12.9	0.0	0.19	12.0	0.0	1.4	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
SinI	PF08671.10	gi|288560522|ref|YP_003424008.1|	-	0.14	11.9	0.0	0.29	10.9	0.0	1.5	1	0	0	1	1	1	0	Anti-repressor	SinI
CTP_transf_like	PF01467.26	gi|288560523|ref|YP_003424009.1|	-	5.6e-17	62.3	0.0	9.7e-17	61.5	0.0	1.4	1	0	0	1	1	1	1	Cytidylyltransferase-like
HIGH_NTase1	PF05636.11	gi|288560523|ref|YP_003424009.1|	-	0.0052	16.1	0.0	0.94	8.6	0.0	2.1	2	0	0	2	2	2	2	HIGH	Nucleotidyl	Transferase
DLH	PF01738.18	gi|288560523|ref|YP_003424009.1|	-	0.035	13.7	0.0	0.087	12.4	0.0	1.6	2	0	0	2	2	2	0	Dienelactone	hydrolase	family
MoaE	PF02391.17	gi|288560524|ref|YP_003424010.1|	-	5.1e-20	71.8	0.0	6.6e-20	71.5	0.0	1.1	1	0	0	1	1	1	1	MoaE	protein
TOBE	PF03459.17	gi|288560525|ref|YP_003424011.1|	-	8.7e-16	58.0	0.3	9.5e-16	57.9	0.3	1.0	1	0	0	1	1	1	1	TOBE	domain
TOBE_2	PF08402.10	gi|288560525|ref|YP_003424011.1|	-	0.042	14.0	0.0	0.054	13.7	0.0	1.2	1	0	0	1	1	1	0	TOBE	domain
TOBE_3	PF12857.7	gi|288560525|ref|YP_003424011.1|	-	0.12	12.3	0.0	0.27	11.2	0.0	1.6	1	1	0	1	1	1	0	TOBE-like	domain
TOBE	PF03459.17	gi|288560526|ref|YP_003424012.1|	-	7.2e-16	58.2	0.6	7.9e-16	58.1	0.6	1.0	1	0	0	1	1	1	1	TOBE	domain
TOBE_3	PF12857.7	gi|288560526|ref|YP_003424012.1|	-	0.0091	15.9	0.1	0.012	15.5	0.1	1.4	1	1	0	1	1	1	1	TOBE-like	domain
TOBE	PF03459.17	gi|288560527|ref|YP_003424013.1|	-	8.8e-15	54.8	0.6	9.5e-15	54.6	0.6	1.0	1	0	0	1	1	1	1	TOBE	domain
TOBE_2	PF08402.10	gi|288560527|ref|YP_003424013.1|	-	0.039	14.1	0.0	0.046	13.9	0.0	1.2	1	0	0	1	1	1	0	TOBE	domain
TOBE_3	PF12857.7	gi|288560527|ref|YP_003424013.1|	-	0.064	13.2	0.2	0.15	12.0	0.2	1.6	1	1	0	1	1	1	0	TOBE-like	domain
TOBE	PF03459.17	gi|288560528|ref|YP_003424014.1|	-	5.7e-16	58.6	0.8	6.2e-16	58.4	0.8	1.0	1	0	0	1	1	1	1	TOBE	domain
TOBE_3	PF12857.7	gi|288560528|ref|YP_003424014.1|	-	0.002	18.0	0.1	0.0025	17.7	0.1	1.2	1	0	0	1	1	1	1	TOBE-like	domain
TOBE_2	PF08402.10	gi|288560528|ref|YP_003424014.1|	-	0.11	12.6	0.0	0.14	12.3	0.0	1.2	1	0	0	1	1	1	0	TOBE	domain
TOBE	PF03459.17	gi|288560529|ref|YP_003424015.1|	-	5.5e-14	52.2	0.1	6e-14	52.1	0.1	1.0	1	0	0	1	1	1	1	TOBE	domain
TOBE_3	PF12857.7	gi|288560529|ref|YP_003424015.1|	-	0.038	13.9	0.0	0.048	13.6	0.0	1.4	1	1	0	1	1	1	0	TOBE-like	domain
HD	PF01966.22	gi|288560530|ref|YP_003424016.1|	-	6.4e-18	65.1	0.3	1.4e-17	64.0	0.3	1.6	1	0	0	1	1	1	1	HD	domain
HDOD	PF08668.12	gi|288560530|ref|YP_003424016.1|	-	0.0082	15.6	0.0	0.018	14.5	0.0	1.5	1	1	0	1	1	1	1	HDOD	domain
Flavoprotein	PF02441.19	gi|288560531|ref|YP_003424017.1|	-	2.1e-25	89.3	0.0	2.7e-25	89.0	0.0	1.1	1	0	0	1	1	1	1	Flavoprotein
RP854	PF17460.2	gi|288560531|ref|YP_003424017.1|	-	0.034	13.9	0.1	0.044	13.5	0.1	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	RP854
DUF3875	PF12991.7	gi|288560531|ref|YP_003424017.1|	-	0.046	13.7	0.0	0.2	11.6	0.1	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function,	B.	Theta	Gene	description	(DUF3875)
MTS	PF05175.14	gi|288560532|ref|YP_003424018.1|	-	1.6e-08	34.3	0.1	4.4e-08	32.9	0.1	1.6	1	1	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.6	gi|288560532|ref|YP_003424018.1|	-	1.6e-08	34.5	0.9	2e-08	34.2	0.9	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|288560532|ref|YP_003424018.1|	-	7.1e-07	29.8	0.0	1.2e-06	29.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.20	gi|288560532|ref|YP_003424018.1|	-	3.3e-06	26.4	0.1	4.1e-06	26.1	0.1	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
PrmA	PF06325.13	gi|288560532|ref|YP_003424018.1|	-	1.2e-05	24.9	2.2	1.5e-05	24.5	2.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Met_10	PF02475.16	gi|288560532|ref|YP_003424018.1|	-	5.2e-05	23.1	0.2	6.8e-05	22.7	0.2	1.3	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_15	PF09445.10	gi|288560532|ref|YP_003424018.1|	-	0.0001	22.0	0.3	0.00013	21.6	0.3	1.3	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_18	PF12847.7	gi|288560532|ref|YP_003424018.1|	-	0.00047	20.1	1.5	0.00068	19.6	1.5	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Spermine_synth	PF01564.17	gi|288560532|ref|YP_003424018.1|	-	0.0011	18.4	1.1	0.0013	18.2	1.1	1.2	1	0	0	1	1	1	1	Spermine/spermidine	synthase	domain
Methyltransf_11	PF08241.12	gi|288560532|ref|YP_003424018.1|	-	0.0014	19.3	0.0	0.0023	18.5	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_3	PF01596.17	gi|288560532|ref|YP_003424018.1|	-	0.0046	16.2	0.7	0.0065	15.7	0.7	1.3	1	0	0	1	1	1	1	O-methyltransferase
TehB	PF03848.14	gi|288560532|ref|YP_003424018.1|	-	0.007	15.8	1.3	0.0091	15.4	1.3	1.2	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
Cons_hypoth95	PF03602.15	gi|288560532|ref|YP_003424018.1|	-	0.01	15.5	0.0	0.014	15.1	0.0	1.2	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
DREV	PF05219.12	gi|288560532|ref|YP_003424018.1|	-	0.042	12.9	0.1	0.072	12.2	0.1	1.4	1	1	0	1	1	1	0	DREV	methyltransferase
UPF0020	PF01170.18	gi|288560532|ref|YP_003424018.1|	-	0.067	12.9	0.0	0.49	10.1	0.0	2.3	2	1	0	2	2	2	0	Putative	RNA	methylase	family	UPF0020
HyaE	PF07449.11	gi|288560532|ref|YP_003424018.1|	-	0.081	12.9	0.0	0.14	12.2	0.0	1.4	1	0	0	1	1	1	0	Hydrogenase-1	expression	protein	HyaE
Methyltransf_23	PF13489.6	gi|288560532|ref|YP_003424018.1|	-	0.19	11.6	0.0	0.27	11.1	0.0	1.4	1	1	0	1	1	1	0	Methyltransferase	domain
NTP_transf_3	PF12804.7	gi|288560533|ref|YP_003424019.1|	-	2.1e-24	86.7	0.0	2.6e-24	86.4	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Glycos_transf_2	PF00535.26	gi|288560533|ref|YP_003424019.1|	-	0.0001	22.1	0.4	0.00017	21.4	0.4	1.3	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
NTP_transferase	PF00483.23	gi|288560533|ref|YP_003424019.1|	-	0.003	17.2	0.0	0.0046	16.6	0.0	1.3	1	0	0	1	1	1	1	Nucleotidyl	transferase
CTP_transf_3	PF02348.19	gi|288560533|ref|YP_003424019.1|	-	0.036	14.0	0.3	1.3	8.9	0.1	2.3	2	1	0	2	2	2	0	Cytidylyltransferase
Ribonucleas_3_3	PF14622.6	gi|288560534|ref|YP_003424020.1|	-	1e-29	103.3	0.0	1.5e-29	102.8	0.0	1.2	1	0	0	1	1	1	1	Ribonuclease-III-like
Ribonuclease_3	PF00636.26	gi|288560534|ref|YP_003424020.1|	-	1.2e-18	67.6	0.0	2.1e-18	66.9	0.0	1.4	1	0	0	1	1	1	1	Ribonuclease	III	domain
dsrm	PF00035.26	gi|288560534|ref|YP_003424020.1|	-	4.7e-12	46.4	0.0	8e-12	45.7	0.0	1.4	1	0	0	1	1	1	1	Double-stranded	RNA	binding	motif
Flavodoxin_4	PF12682.7	gi|288560536|ref|YP_003424022.1|	-	1e-15	57.8	0.1	1.4e-15	57.3	0.1	1.1	1	0	0	1	1	1	1	Flavodoxin
FMN_red	PF03358.15	gi|288560536|ref|YP_003424022.1|	-	0.002	17.9	0.0	0.0026	17.5	0.0	1.1	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.17	gi|288560536|ref|YP_003424022.1|	-	0.0023	17.7	0.0	0.0029	17.3	0.0	1.2	1	0	0	1	1	1	1	Flavodoxin-like	fold
Ribosomal_L37e	PF01907.19	gi|288560537|ref|YP_003424023.1|	-	4.2e-26	90.9	12.7	4.7e-26	90.7	12.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L37e
DZR	PF12773.7	gi|288560537|ref|YP_003424023.1|	-	0.015	15.3	1.7	0.021	14.8	1.7	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
HypA	PF01155.19	gi|288560537|ref|YP_003424023.1|	-	0.032	14.3	0.9	0.036	14.1	0.9	1.1	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zf-piccolo	PF05715.13	gi|288560537|ref|YP_003424023.1|	-	0.036	14.2	2.2	0.1	12.8	2.2	1.8	1	1	0	1	1	1	0	Piccolo	Zn-finger
zf-ribbon_3	PF13248.6	gi|288560537|ref|YP_003424023.1|	-	0.038	13.4	2.7	0.065	12.7	2.7	1.4	1	1	0	1	1	1	0	zinc-ribbon	domain
MraY_sig1	PF10555.9	gi|288560537|ref|YP_003424023.1|	-	0.24	11.0	1.3	0.41	10.3	1.3	1.4	1	0	0	1	1	1	0	Phospho-N-acetylmuramoyl-pentapeptide-transferase	signature	1
zinc_ribbon_2	PF13240.6	gi|288560537|ref|YP_003424023.1|	-	0.69	9.7	4.8	2.7	7.8	0.6	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
LSM	PF01423.22	gi|288560538|ref|YP_003424024.1|	-	6.9e-24	83.3	0.0	7.7e-24	83.2	0.0	1.0	1	0	0	1	1	1	1	LSM	domain
SM-ATX	PF14438.6	gi|288560538|ref|YP_003424024.1|	-	0.00064	19.8	0.0	0.00081	19.5	0.0	1.3	1	1	0	1	1	1	1	Ataxin	2	SM	domain
DUF150_C	PF17384.2	gi|288560538|ref|YP_003424024.1|	-	0.064	13.4	0.0	0.07	13.3	0.0	1.2	1	0	0	1	1	1	0	RimP	C-terminal	SH3	domain
Creatininase	PF02633.14	gi|288560539|ref|YP_003424025.1|	-	1.3e-12	47.7	0.0	1.9e-12	47.2	0.0	1.2	1	0	0	1	1	1	1	Creatinine	amidohydrolase
PUA	PF01472.20	gi|288560540|ref|YP_003424026.1|	-	7.1e-18	64.3	1.3	1.3e-17	63.5	1.3	1.4	1	0	0	1	1	1	1	PUA	domain
DUF1947	PF09183.10	gi|288560540|ref|YP_003424026.1|	-	1e-11	44.9	1.0	2e-11	44.0	1.0	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1947)
UPF0113	PF03657.13	gi|288560540|ref|YP_003424026.1|	-	0.0039	17.4	0.1	0.0081	16.4	0.1	1.5	1	0	0	1	1	1	1	UPF0113	PUA	domain
SNF	PF00209.18	gi|288560541|ref|YP_003424027.1|	-	6.4e-78	262.7	50.8	1.6e-49	169.0	27.8	2.0	1	1	1	2	2	2	2	Sodium:neurotransmitter	symporter	family
DUF4519	PF15012.6	gi|288560541|ref|YP_003424027.1|	-	0.47	10.7	0.1	0.47	10.7	0.1	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4519)
dCMP_cyt_deam_1	PF00383.23	gi|288560542|ref|YP_003424028.1|	-	6.3e-21	74.2	0.1	8.3e-21	73.8	0.1	1.1	1	0	0	1	1	1	1	Cytidine	and	deoxycytidylate	deaminase	zinc-binding	region
MafB19-deam	PF14437.6	gi|288560542|ref|YP_003424028.1|	-	4.9e-09	36.1	0.1	1e-07	31.8	0.1	2.1	1	1	0	1	1	1	1	MafB19-like	deaminase
RyR	PF02026.16	gi|288560543|ref|YP_003424029.1|	-	8.9e-09	35.4	6.8	0.00045	20.4	0.0	5.0	5	1	0	5	5	5	3	RyR	domain
SHOCT	PF09851.9	gi|288560543|ref|YP_003424029.1|	-	0.34	10.7	1.9	1.1	9.1	0.0	2.4	2	0	0	2	2	2	0	Short	C-terminal	domain
STAT2_C	PF12188.8	gi|288560543|ref|YP_003424029.1|	-	1.5	8.8	4.2	20	5.2	0.0	3.2	4	0	0	4	4	4	0	Signal	transducer	and	activator	of	transcription	2	C	terminal
Metallophos	PF00149.28	gi|288560544|ref|YP_003424030.1|	-	1.3e-12	48.7	7.2	1.6e-12	48.4	7.2	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|288560544|ref|YP_003424030.1|	-	3.5e-06	27.3	0.0	1.6e-05	25.2	0.0	1.9	2	0	0	2	2	2	1	Calcineurin-like	phosphoesterase	superfamily	domain
DAGK_prokar	PF01219.19	gi|288560545|ref|YP_003424031.1|	-	3.4e-33	113.5	8.9	3.9e-33	113.3	8.9	1.0	1	0	0	1	1	1	1	Prokaryotic	diacylglycerol	kinase
UbiA	PF01040.18	gi|288560545|ref|YP_003424031.1|	-	0.023	14.0	3.7	0.04	13.2	3.7	1.4	1	1	0	1	1	1	0	UbiA	prenyltransferase	family
RlaP	PF10127.9	gi|288560546|ref|YP_003424032.1|	-	3.2e-24	85.9	0.2	3.5e-24	85.7	0.2	1.0	1	0	0	1	1	1	1	RNA	repair	pathway	DNA	polymerase	beta	family
Polbeta	PF18765.1	gi|288560546|ref|YP_003424032.1|	-	4.7e-05	23.4	1.7	5.4e-05	23.2	1.7	1.1	1	0	0	1	1	1	1	Polymerase	beta,	Nucleotidyltransferase
NTP_transf_2	PF01909.23	gi|288560546|ref|YP_003424032.1|	-	0.023	15.0	0.2	0.026	14.8	0.2	1.2	1	0	0	1	1	1	0	Nucleotidyltransferase	domain
Phage_head_fibr	PF11133.8	gi|288560546|ref|YP_003424032.1|	-	0.063	12.7	1.0	0.46	9.8	0.1	1.9	1	1	1	2	2	2	0	Head	fiber	protein
RlaP	PF10127.9	gi|288560547|ref|YP_003424033.1|	-	1.9e-08	34.2	0.0	2.3e-08	34.0	0.0	1.0	1	0	0	1	1	1	1	RNA	repair	pathway	DNA	polymerase	beta	family
Condensin2nSMC	PF12422.8	gi|288560547|ref|YP_003424033.1|	-	0.11	12.7	0.0	4.6	7.4	0.0	2.2	1	1	0	2	2	2	0	Condensin	II	non	structural	maintenance	of	chromosomes	subunit
Peptidase_M24_C	PF16188.5	gi|288560548|ref|YP_003424034.1|	-	0.051	13.7	0.2	0.11	12.6	0.2	1.6	1	0	0	1	1	1	0	C-terminal	region	of	peptidase_M24
DUF3288	PF11691.8	gi|288560548|ref|YP_003424034.1|	-	0.13	12.3	0.6	0.74	9.9	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3288)
SIS	PF01380.22	gi|288560549|ref|YP_003424035.1|	-	2.7e-52	176.1	0.8	4.6e-27	94.5	0.6	2.3	2	0	0	2	2	2	2	SIS	domain
GATase_6	PF13522.6	gi|288560549|ref|YP_003424035.1|	-	5.4e-19	68.7	0.0	1e-18	67.9	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_7	PF13537.6	gi|288560549|ref|YP_003424035.1|	-	2.5e-18	66.2	0.0	2.2e-17	63.1	0.0	2.2	2	0	0	2	2	2	1	Glutamine	amidotransferase	domain
GATase_4	PF13230.6	gi|288560549|ref|YP_003424035.1|	-	0.0032	16.4	0.0	0.0049	15.8	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
HEAT	PF02985.22	gi|288560550|ref|YP_003424036.1|	-	1e-10	40.9	0.7	14	6.3	0.0	10.5	13	0	0	13	13	13	2	HEAT	repeat
HEAT_2	PF13646.6	gi|288560550|ref|YP_003424036.1|	-	1.4e-08	35.0	4.0	0.59	10.6	0.0	8.1	7	2	1	8	8	8	3	HEAT	repeats
LMWPc	PF01451.21	gi|288560551|ref|YP_003424037.1|	-	2.8e-31	108.8	0.0	3.3e-31	108.6	0.0	1.0	1	0	0	1	1	1	1	Low	molecular	weight	phosphotyrosine	protein	phosphatase
ATPase_2	PF01637.18	gi|288560554|ref|YP_003424040.1|	-	7e-14	52.3	5.9	7e-14	52.3	5.9	1.7	2	0	0	2	2	2	1	ATPase	domain	predominantly	from	Archaea
AAA_16	PF13191.6	gi|288560554|ref|YP_003424040.1|	-	5.7e-11	43.1	0.0	9.7e-11	42.3	0.0	1.4	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_14	PF13173.6	gi|288560554|ref|YP_003424040.1|	-	5.8e-10	39.3	3.1	6.5e-05	23.0	3.1	3.1	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|288560554|ref|YP_003424040.1|	-	1e-05	25.9	0.1	0.0018	18.5	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
AAA_35	PF14516.6	gi|288560554|ref|YP_003424040.1|	-	0.00083	18.3	1.5	0.0011	17.8	0.1	1.8	2	0	0	2	2	2	1	AAA-like	domain
AAA_7	PF12775.7	gi|288560554|ref|YP_003424040.1|	-	0.0011	18.5	0.5	0.0024	17.4	0.1	1.8	2	0	0	2	2	2	1	P-loop	containing	dynein	motor	region
DUF815	PF05673.13	gi|288560554|ref|YP_003424040.1|	-	0.0016	17.7	0.1	0.0049	16.1	0.0	1.7	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF815)
AAA_18	PF13238.6	gi|288560554|ref|YP_003424040.1|	-	0.01	16.4	0.0	0.026	15.1	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
NACHT	PF05729.12	gi|288560554|ref|YP_003424040.1|	-	0.013	15.5	0.0	0.026	14.4	0.0	1.6	1	0	0	1	1	1	0	NACHT	domain
NTPase_1	PF03266.15	gi|288560554|ref|YP_003424040.1|	-	0.016	15.2	0.1	0.039	13.8	0.1	1.7	1	0	0	1	1	1	0	NTPase
HTH_5	PF01022.20	gi|288560554|ref|YP_003424040.1|	-	0.018	14.9	0.1	0.046	13.6	0.1	1.7	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
SRP54	PF00448.22	gi|288560554|ref|YP_003424040.1|	-	0.019	14.6	0.2	0.032	13.9	0.0	1.6	2	0	0	2	2	1	0	SRP54-type	protein,	GTPase	domain
DUF5003	PF16394.5	gi|288560554|ref|YP_003424040.1|	-	0.021	14.0	0.2	0.052	12.7	0.1	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF5003)
LexA_DNA_bind	PF01726.16	gi|288560554|ref|YP_003424040.1|	-	0.027	14.2	0.1	0.08	12.7	0.1	1.8	1	0	0	1	1	1	0	LexA	DNA	binding	domain
DUF2791	PF10923.8	gi|288560554|ref|YP_003424040.1|	-	0.03	13.2	0.2	0.096	11.5	0.0	1.7	2	0	0	2	2	2	0	P-loop	Domain	of	unknown	function	(DUF2791)
SRPRB	PF09439.10	gi|288560554|ref|YP_003424040.1|	-	0.035	13.5	0.0	0.077	12.4	0.0	1.5	1	0	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
KTI12	PF08433.10	gi|288560554|ref|YP_003424040.1|	-	0.037	13.5	0.0	0.072	12.5	0.0	1.5	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
AAA	PF00004.29	gi|288560554|ref|YP_003424040.1|	-	0.038	14.4	3.0	0.2	12.1	1.6	2.7	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
NB-ARC	PF00931.22	gi|288560554|ref|YP_003424040.1|	-	0.053	12.7	0.1	0.095	11.9	0.1	1.4	1	0	0	1	1	1	0	NB-ARC	domain
MeaB	PF03308.16	gi|288560554|ref|YP_003424040.1|	-	0.055	12.4	0.0	0.084	11.8	0.0	1.2	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
Zeta_toxin	PF06414.12	gi|288560554|ref|YP_003424040.1|	-	0.06	12.6	0.0	0.12	11.7	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
AAA_30	PF13604.6	gi|288560554|ref|YP_003424040.1|	-	0.068	12.9	0.1	0.11	12.2	0.1	1.2	1	0	0	1	1	1	0	AAA	domain
MobB	PF03205.14	gi|288560554|ref|YP_003424040.1|	-	0.098	12.6	0.1	0.2	11.5	0.1	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
APS_kinase	PF01583.20	gi|288560554|ref|YP_003424040.1|	-	0.099	12.5	0.0	0.18	11.7	0.0	1.3	1	0	0	1	1	1	0	Adenylylsulphate	kinase
TrmB	PF01978.19	gi|288560554|ref|YP_003424040.1|	-	0.11	12.4	0.0	0.23	11.4	0.0	1.4	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
CBP_BcsQ	PF06564.12	gi|288560554|ref|YP_003424040.1|	-	0.12	11.9	0.0	0.3	10.5	0.0	1.7	2	0	0	2	2	2	0	Cellulose	biosynthesis	protein	BcsQ
DUF4062	PF13271.6	gi|288560555|ref|YP_003424041.1|	-	3e-16	59.5	0.1	1.4e-15	57.4	0.0	2.2	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4062)
AAA_22	PF13401.6	gi|288560555|ref|YP_003424041.1|	-	7.4e-05	23.0	0.0	0.00023	21.4	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
ATPase_2	PF01637.18	gi|288560555|ref|YP_003424041.1|	-	0.00037	20.5	3.3	0.00037	20.5	3.3	2.7	2	1	0	2	2	2	1	ATPase	domain	predominantly	from	Archaea
AAA_16	PF13191.6	gi|288560555|ref|YP_003424041.1|	-	0.00085	19.7	0.0	0.0051	17.2	0.0	2.5	3	1	0	3	3	3	1	AAA	ATPase	domain
Yop-YscD_cpl	PF16697.5	gi|288560555|ref|YP_003424041.1|	-	0.067	13.5	0.0	0.2	12.0	0.0	1.8	1	0	0	1	1	1	0	Inner	membrane	component	of	T3SS,	cytoplasmic	domain
NACHT	PF05729.12	gi|288560555|ref|YP_003424041.1|	-	0.15	12.0	0.3	1.3	8.9	0.0	2.5	3	0	0	3	3	3	0	NACHT	domain
Chlam_PMP	PF02415.17	gi|288560555|ref|YP_003424041.1|	-	0.26	11.9	26.7	1.5	9.5	0.0	8.1	9	0	0	9	9	9	0	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
GTP_EFTU	PF00009.27	gi|288560556|ref|YP_003424042.1|	-	2.5e-65	219.6	0.1	3.9e-65	219.1	0.1	1.3	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
EFG_IV	PF03764.18	gi|288560556|ref|YP_003424042.1|	-	2.5e-23	82.1	0.0	7.3e-23	80.6	0.0	1.8	1	0	0	1	1	1	1	Elongation	factor	G,	domain	IV
EFG_II	PF14492.6	gi|288560556|ref|YP_003424042.1|	-	3.6e-23	81.4	0.8	8.5e-23	80.3	0.8	1.7	1	0	0	1	1	1	1	Elongation	Factor	G,	domain	II
EFG_C	PF00679.24	gi|288560556|ref|YP_003424042.1|	-	3.6e-21	75.0	0.0	2.3e-20	72.4	0.0	2.4	3	0	0	3	3	3	1	Elongation	factor	G	C-terminus
GTP_EFTU_D2	PF03144.25	gi|288560556|ref|YP_003424042.1|	-	2.7e-08	34.1	0.9	2.7e-08	34.1	0.9	2.1	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.23	gi|288560556|ref|YP_003424042.1|	-	0.00064	19.8	0.0	0.0014	18.7	0.0	1.6	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
RF3_C	PF16658.5	gi|288560556|ref|YP_003424042.1|	-	0.15	11.9	0.0	0.3	10.9	0.0	1.5	1	0	0	1	1	1	0	Class	II	release	factor	RF3,	C-terminal	domain
RsgA_GTPase	PF03193.16	gi|288560556|ref|YP_003424042.1|	-	0.2	11.5	0.8	0.41	10.5	0.2	1.7	2	0	0	2	2	2	0	RsgA	GTPase
HEAT	PF02985.22	gi|288560557|ref|YP_003424043.1|	-	0.0034	17.5	0.2	2.3	8.7	0.0	4.3	4	0	0	4	4	4	1	HEAT	repeat
HEAT_2	PF13646.6	gi|288560557|ref|YP_003424043.1|	-	0.05	14.0	5.2	2.4	8.6	0.7	4.9	3	2	1	4	4	4	0	HEAT	repeats
DUF2773	PF10971.8	gi|288560557|ref|YP_003424043.1|	-	0.055	13.6	0.1	0.39	10.9	0.0	2.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2773)
DUF465	PF04325.13	gi|288560557|ref|YP_003424043.1|	-	0.057	13.5	1.0	0.36	10.9	1.0	2.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF465)
DUF5336	PF17270.2	gi|288560558|ref|YP_003424044.1|	-	0.1	12.2	0.3	0.1	12.2	0.3	1.8	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5336)
DUF1281_C	PF18406.1	gi|288560559|ref|YP_003424045.1|	-	6.9e-06	25.7	2.4	1.2e-05	24.9	2.4	1.5	1	0	0	1	1	1	1	Ferredoxin-like	domain	in	Api92-like	protein
DUF4062	PF13271.6	gi|288560560|ref|YP_003424046.1|	-	1.3e-12	47.9	0.2	1e-11	45.0	0.0	2.7	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4062)
WD40_like	PF17005.5	gi|288560560|ref|YP_003424046.1|	-	1.8e-07	30.8	12.7	0.014	14.7	0.1	3.5	3	0	0	3	3	3	3	WD40-like	domain
AAA_22	PF13401.6	gi|288560560|ref|YP_003424046.1|	-	3.2e-06	27.4	0.0	1.5e-05	25.3	0.0	2.1	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.6	gi|288560560|ref|YP_003424046.1|	-	2.8e-05	24.6	0.1	0.0002	21.8	0.0	2.3	2	0	0	2	2	2	1	AAA	ATPase	domain
NACHT	PF05729.12	gi|288560560|ref|YP_003424046.1|	-	5.1e-05	23.3	0.0	9.7e-05	22.3	0.0	1.4	1	0	0	1	1	1	1	NACHT	domain
WD40	PF00400.32	gi|288560560|ref|YP_003424046.1|	-	0.00016	22.4	3.3	4	8.5	0.0	6.4	7	0	0	7	7	7	1	WD	domain,	G-beta	repeat
APAF1_C	PF17908.1	gi|288560560|ref|YP_003424046.1|	-	0.00068	19.6	0.0	0.0026	17.7	0.0	2.0	1	0	0	1	1	1	1	APAF-1	helical	domain
PQQ_3	PF13570.6	gi|288560560|ref|YP_003424046.1|	-	0.035	14.6	0.0	35	5.0	0.0	4.5	5	0	0	5	5	5	0	PQQ-like	domain
Hira	PF07569.11	gi|288560560|ref|YP_003424046.1|	-	0.042	13.6	0.0	49	3.5	0.0	4.0	4	1	0	5	5	5	0	TUP1-like	enhancer	of	split
SBP_bac_3	PF00497.20	gi|288560560|ref|YP_003424046.1|	-	0.076	12.4	0.2	2.2	7.7	0.0	2.6	2	0	0	2	2	2	0	Bacterial	extracellular	solute-binding	proteins,	family	3
AAA_14	PF13173.6	gi|288560560|ref|YP_003424046.1|	-	0.9	9.6	5.0	2.8	8.0	0.3	4.1	3	1	0	3	3	3	0	AAA	domain
ResIII	PF04851.15	gi|288560560|ref|YP_003424046.1|	-	2.8	7.9	9.0	0.53	10.3	0.1	3.9	3	1	1	4	4	4	0	Type	III	restriction	enzyme,	res	subunit
HSP70	PF00012.20	gi|288560561|ref|YP_003424047.1|	-	2.5e-67	227.4	0.3	8.4e-65	219.1	0.0	2.7	2	1	0	2	2	2	1	Hsp70	protein
MreB_Mbl	PF06723.13	gi|288560561|ref|YP_003424047.1|	-	8.9e-21	74.0	0.0	1.4e-13	50.4	0.0	3.4	3	1	0	3	3	3	2	MreB/Mbl	protein
Actin	PF00022.19	gi|288560561|ref|YP_003424047.1|	-	0.034	12.8	0.0	1.8	7.1	0.0	2.3	2	0	0	2	2	2	0	Actin
DDR	PF08841.10	gi|288560561|ref|YP_003424047.1|	-	0.22	10.5	0.2	1.6	7.6	0.1	2.3	2	1	0	2	2	2	0	Diol	dehydratase	reactivase	ATPase-like	domain
Pkinase	PF00069.25	gi|288560562|ref|YP_003424048.1|	-	5.6e-48	163.6	0.0	1.2e-47	162.5	0.0	1.6	2	0	0	2	2	2	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.17	gi|288560562|ref|YP_003424048.1|	-	2.2e-32	112.4	0.0	3.5e-32	111.7	0.0	1.3	1	0	0	1	1	1	1	Protein	tyrosine	kinase
Pkinase_fungal	PF17667.1	gi|288560562|ref|YP_003424048.1|	-	0.0028	16.5	0.0	0.0044	15.8	0.0	1.2	1	0	0	1	1	1	1	Fungal	protein	kinase
APH	PF01636.23	gi|288560562|ref|YP_003424048.1|	-	0.12	12.2	0.0	0.41	10.5	0.0	1.7	1	1	1	2	2	2	0	Phosphotransferase	enzyme	family
FumaraseC_C	PF10415.9	gi|288560563|ref|YP_003424049.1|	-	0.053	13.9	0.8	0.14	12.6	0.8	1.7	1	0	0	1	1	1	0	Fumarase	C	C-terminus
Lipase_GDSL	PF00657.22	gi|288560563|ref|YP_003424049.1|	-	0.077	13.0	0.0	0.21	11.5	0.0	1.7	1	1	0	1	1	1	0	GDSL-like	Lipase/Acylhydrolase
Armet	PF10208.9	gi|288560563|ref|YP_003424049.1|	-	0.69	9.8	6.2	0.12	12.3	1.5	2.3	2	1	0	2	2	2	0	Degradation	arginine-rich	protein	for	mis-folding
Yop-YscD_cpl	PF16697.5	gi|288560564|ref|YP_003424050.1|	-	6.1e-06	26.5	0.0	5.6e-05	23.4	0.0	2.2	1	1	0	1	1	1	1	Inner	membrane	component	of	T3SS,	cytoplasmic	domain
FHA	PF00498.26	gi|288560564|ref|YP_003424050.1|	-	7.6e-06	26.2	0.0	1.7e-05	25.1	0.0	1.6	1	1	0	1	1	1	1	FHA	domain
HTH_20	PF12840.7	gi|288560564|ref|YP_003424050.1|	-	0.0056	16.7	0.0	0.011	15.8	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
DUF4058	PF13267.6	gi|288560565|ref|YP_003424051.1|	-	0.25	10.7	2.4	0.37	10.2	2.4	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4058)
SIS	PF01380.22	gi|288560566|ref|YP_003424052.1|	-	2.8e-08	33.7	0.0	4e-07	29.9	0.0	2.2	2	0	0	2	2	2	1	SIS	domain
SIS_2	PF13580.6	gi|288560566|ref|YP_003424052.1|	-	0.02	14.9	0.2	3.8	7.5	0.0	2.4	1	1	1	2	2	2	0	SIS	domain
RtcB	PF01139.17	gi|288560567|ref|YP_003424053.1|	-	8.8e-67	226.1	3.1	6.3e-57	193.6	0.3	2.0	1	1	1	2	2	2	2	tRNA-splicing	ligase	RtcB
Baculo_LEF-11	PF06385.12	gi|288560567|ref|YP_003424053.1|	-	0.12	12.9	1.5	1.7	9.2	0.0	2.8	3	0	0	3	3	3	0	Baculovirus	LEF-11	protein
Chlam_PMP	PF02415.17	gi|288560568|ref|YP_003424054.1|	-	0.00015	22.1	16.1	3.3	8.4	0.3	5.9	5	0	0	5	5	5	3	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
Pentapeptide_3	PF13576.6	gi|288560568|ref|YP_003424054.1|	-	1	9.5	0.1	1	9.5	0.1	3.0	4	0	0	4	4	4	0	Pentapeptide	repeats	(9	copies)
Chlam_PMP	PF02415.17	gi|288560569|ref|YP_003424055.1|	-	1.9e-05	24.9	14.3	0.08	13.4	0.0	5.4	4	1	0	4	4	4	3	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
Focal_AT	PF03623.13	gi|288560569|ref|YP_003424055.1|	-	0.068	13.2	0.0	0.25	11.3	0.0	1.8	2	0	0	2	2	2	0	Focal	adhesion	targeting	region
NS3	PF17530.2	gi|288560569|ref|YP_003424055.1|	-	0.39	10.2	5.1	0.76	9.3	0.7	2.3	2	0	0	2	2	2	0	Non-structural	protein	NS3
DUF285	PF03382.14	gi|288560571|ref|YP_003424057.1|	-	1.8e-19	69.7	9.8	2.6e-19	69.2	7.8	2.3	2	1	0	2	2	2	1	Mycoplasma	protein	of	unknown	function,	DUF285
LRR_5	PF13306.6	gi|288560571|ref|YP_003424057.1|	-	3e-05	24.0	4.0	0.00019	21.4	3.9	2.6	1	1	0	1	1	1	1	BspA	type	Leucine	rich	repeat	region	(6	copies)
Ferritin	PF00210.24	gi|288560571|ref|YP_003424057.1|	-	0.12	12.3	1.0	0.51	10.3	0.1	2.4	3	0	0	3	3	3	0	Ferritin-like	domain
TPR_1	PF00515.28	gi|288560572|ref|YP_003424058.1|	-	1.4e-28	97.5	16.3	6.5e-08	32.1	0.1	6.4	5	2	2	7	7	7	5	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|288560572|ref|YP_003424058.1|	-	7e-25	85.1	8.2	1.6e-06	27.8	0.0	6.6	5	2	2	7	7	7	5	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|288560572|ref|YP_003424058.1|	-	2.3e-16	58.6	10.5	0.00016	21.6	0.1	6.0	5	1	1	6	6	6	4	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|288560572|ref|YP_003424058.1|	-	1e-13	51.4	0.6	0.0017	18.6	0.0	5.4	3	2	1	4	4	4	3	Tetratricopeptide	repeat
TPR_11	PF13414.6	gi|288560572|ref|YP_003424058.1|	-	1.4e-12	47.0	3.6	0.00096	18.8	0.0	5.4	3	1	2	5	5	5	3	TPR	repeat
TPR_19	PF14559.6	gi|288560572|ref|YP_003424058.1|	-	2.3e-09	37.6	0.7	0.0015	19.0	0.1	4.5	4	1	1	5	5	5	1	Tetratricopeptide	repeat
TPR_17	PF13431.6	gi|288560572|ref|YP_003424058.1|	-	4.1e-09	36.2	10.1	0.38	11.3	0.0	6.3	6	1	1	7	7	7	3	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|288560572|ref|YP_003424058.1|	-	6.2e-09	35.9	0.0	2.2	9.4	0.0	5.1	3	1	2	5	5	5	1	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|288560572|ref|YP_003424058.1|	-	2.9e-08	33.8	0.3	0.72	10.6	0.0	5.5	5	1	0	5	5	5	1	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|288560572|ref|YP_003424058.1|	-	1.6e-07	31.9	0.0	0.44	11.3	0.0	4.2	3	1	0	4	4	4	2	Tetratricopeptide	repeat
TPR_7	PF13176.6	gi|288560572|ref|YP_003424058.1|	-	1.9e-05	24.3	0.3	0.43	10.7	0.0	4.7	6	0	0	6	6	6	1	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|288560572|ref|YP_003424058.1|	-	2e-05	24.7	2.8	0.36	11.1	0.0	3.9	3	1	0	3	3	3	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_10	PF13374.6	gi|288560572|ref|YP_003424058.1|	-	3.7e-05	23.5	1.0	6.3	6.8	0.0	5.0	5	0	0	5	5	5	1	Tetratricopeptide	repeat
Fis1_TPR_C	PF14853.6	gi|288560572|ref|YP_003424058.1|	-	5.2e-05	23.2	3.4	0.11	12.5	0.0	4.2	5	0	0	5	5	5	1	Fis1	C-terminal	tetratricopeptide	repeat
TPR_9	PF13371.6	gi|288560572|ref|YP_003424058.1|	-	8e-05	22.7	0.0	9.1	6.5	0.0	4.7	3	2	2	5	5	5	1	Tetratricopeptide	repeat
NARP1	PF12569.8	gi|288560572|ref|YP_003424058.1|	-	0.0006	18.8	0.1	0.51	9.2	0.0	3.1	2	2	1	3	3	3	2	NMDA	receptor-regulated	protein	1
DUF3856	PF12968.7	gi|288560572|ref|YP_003424058.1|	-	0.0032	17.5	1.3	17	5.5	0.0	3.8	2	2	2	4	4	4	0	Domain	of	Unknown	Function	(DUF3856)
DUF5113	PF17140.4	gi|288560572|ref|YP_003424058.1|	-	0.074	12.9	0.6	0.54	10.1	0.0	2.7	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF5113)
Cys_rich_FGFR	PF00839.17	gi|288560572|ref|YP_003424058.1|	-	0.13	12.4	0.0	0.27	11.4	0.0	1.5	1	0	0	1	1	1	0	Cysteine	rich	repeat
UPF0029	PF01205.19	gi|288560573|ref|YP_003424059.1|	-	2.2e-33	114.7	0.0	3.6e-33	114.0	0.0	1.3	1	0	0	1	1	1	1	Uncharacterized	protein	family	UPF0029
DEAD	PF00270.29	gi|288560575|ref|YP_003424061.1|	-	8e-24	84.4	0.0	1.7e-23	83.3	0.0	1.6	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.31	gi|288560575|ref|YP_003424061.1|	-	4.5e-14	52.7	0.1	4.7e-13	49.5	0.0	2.8	3	0	0	3	3	3	1	Helicase	conserved	C-terminal	domain
ApbA_C	PF08546.11	gi|288560576|ref|YP_003424062.1|	-	8.8e-34	116.4	0.0	1.3e-33	115.8	0.0	1.3	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA	C	terminal
ApbA	PF02558.16	gi|288560576|ref|YP_003424062.1|	-	1.9e-16	60.1	0.0	2.8e-16	59.5	0.0	1.2	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
Methyltransf_11	PF08241.12	gi|288560576|ref|YP_003424062.1|	-	0.029	15.0	0.0	0.27	11.9	0.0	2.5	3	0	0	3	3	3	0	Methyltransferase	domain
NAD_Gly3P_dh_N	PF01210.23	gi|288560576|ref|YP_003424062.1|	-	0.035	14.1	0.0	0.059	13.4	0.0	1.4	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
MGS	PF02142.22	gi|288560576|ref|YP_003424062.1|	-	0.13	12.5	0.0	0.42	10.8	0.0	1.9	2	0	0	2	2	2	0	MGS-like	domain
Astro_capsid_p	PF12226.8	gi|288560577|ref|YP_003424063.1|	-	0.026	13.7	1.1	0.048	12.8	1.0	1.5	1	1	0	1	1	1	0	Turkey	astrovirus	capsid	protein
AIDA	PF16168.5	gi|288560577|ref|YP_003424063.1|	-	0.13	12.3	0.0	0.53	10.4	0.0	2.0	2	0	0	2	2	2	0	Adhesin	of	bacterial	autotransporter	system,	probable	stalk
NB	PF04159.13	gi|288560577|ref|YP_003424063.1|	-	0.14	12.2	1.9	0.2	11.7	1.9	1.3	1	0	0	1	1	1	0	NB	glycoprotein
FtsX	PF02687.21	gi|288560578|ref|YP_003424064.1|	-	0.015	15.7	6.0	0.021	15.3	6.0	1.2	1	0	0	1	1	1	0	FtsX-like	permease	family
Abhydrolase_9_N	PF15420.6	gi|288560578|ref|YP_003424064.1|	-	0.026	14.5	1.8	0.027	14.5	1.8	1.0	1	0	0	1	1	1	0	Alpha/beta-hydrolase	family	N-terminus
DUF21	PF01595.20	gi|288560578|ref|YP_003424064.1|	-	0.63	9.7	6.1	0.76	9.5	6.1	1.1	1	0	0	1	1	1	0	Cyclin	M	transmembrane	N-terminal	domain
TrmO	PF01980.16	gi|288560579|ref|YP_003424065.1|	-	4.5e-24	84.9	0.0	5.6e-24	84.6	0.0	1.1	1	0	0	1	1	1	1	tRNA-methyltransferase	O
P-II	PF00543.22	gi|288560580|ref|YP_003424066.1|	-	7.1e-38	129.3	1.0	8e-38	129.2	1.0	1.0	1	0	0	1	1	1	1	Nitrogen	regulatory	protein	P-II
CdAMP_rec	PF06153.11	gi|288560580|ref|YP_003424066.1|	-	0.097	12.9	0.2	0.24	11.6	0.2	1.8	1	1	0	1	1	1	0	Cyclic-di-AMP	receptor
Ammonium_transp	PF00909.21	gi|288560581|ref|YP_003424067.1|	-	2.5e-121	405.1	42.1	2.8e-121	405.0	42.1	1.0	1	0	0	1	1	1	1	Ammonium	Transporter	Family
TRIQK	PF15168.6	gi|288560581|ref|YP_003424067.1|	-	9.8	6.2	6.4	0.96	9.4	0.1	2.6	3	0	0	3	3	3	0	Triple	QxxK/R	motif-containing	protein	family
Cupin_2	PF07883.11	gi|288560583|ref|YP_003424069.1|	-	4.1e-13	48.8	0.2	6.9e-13	48.1	0.2	1.3	1	0	0	1	1	1	1	Cupin	domain
HTH_3	PF01381.22	gi|288560583|ref|YP_003424069.1|	-	8.1e-13	48.2	0.1	1.2e-12	47.7	0.1	1.3	1	0	0	1	1	1	1	Helix-turn-helix
HTH_31	PF13560.6	gi|288560583|ref|YP_003424069.1|	-	2.3e-08	34.3	0.0	3.6e-08	33.6	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_25	PF13413.6	gi|288560583|ref|YP_003424069.1|	-	8.9e-07	28.7	0.0	8.1e-06	25.6	0.0	2.2	2	0	0	2	2	2	1	Helix-turn-helix	domain
Cupin_3	PF05899.12	gi|288560583|ref|YP_003424069.1|	-	3.5e-05	23.4	0.1	5.8e-05	22.7	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF861)
HTH_26	PF13443.6	gi|288560583|ref|YP_003424069.1|	-	5e-05	23.7	0.0	7.2e-05	23.1	0.0	1.3	1	0	0	1	1	1	1	Cro/C1-type	HTH	DNA-binding	domain
HTH_19	PF12844.7	gi|288560583|ref|YP_003424069.1|	-	0.00037	20.4	0.1	0.0006	19.8	0.1	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
AraC_binding	PF02311.19	gi|288560583|ref|YP_003424069.1|	-	0.00084	19.2	0.1	0.0013	18.6	0.1	1.2	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
Pirin_C	PF05726.13	gi|288560583|ref|YP_003424069.1|	-	0.11	12.9	0.0	0.21	11.9	0.0	1.5	1	0	0	1	1	1	0	Pirin	C-terminal	cupin	domain
Cupin_7	PF12973.7	gi|288560583|ref|YP_003424069.1|	-	0.19	11.6	0.7	1	9.3	0.1	2.1	1	1	1	2	2	2	0	ChrR	Cupin-like	domain
AMP-binding	PF00501.28	gi|288560584|ref|YP_003424070.1|	-	1e-109	367.0	0.1	1.2e-109	366.7	0.1	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.6	gi|288560584|ref|YP_003424070.1|	-	3.8e-16	59.8	0.0	8e-16	58.8	0.0	1.6	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
PfkB	PF00294.24	gi|288560585|ref|YP_003424071.1|	-	1.4e-18	67.3	0.0	2.1e-18	66.7	0.0	1.2	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Imp-YgjV	PF10688.9	gi|288560586|ref|YP_003424072.1|	-	2e-28	99.2	21.2	2.3e-28	99.0	21.2	1.0	1	0	0	1	1	1	1	Bacterial	inner	membrane	protein
FeoB_associated	PF12669.7	gi|288560586|ref|YP_003424072.1|	-	2.7	8.5	0.0	2.7	8.5	0.0	3.8	5	0	0	5	5	5	0	FeoB-associated	Cys-rich	membrane	protein
2TM	PF13239.6	gi|288560587|ref|YP_003424073.1|	-	1.2e-23	83.2	5.6	1.4e-23	83.0	5.6	1.0	1	0	0	1	1	1	1	2TM	domain
DUF2207	PF09972.9	gi|288560587|ref|YP_003424073.1|	-	0.0084	14.9	0.1	0.0089	14.8	0.1	1.0	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2207)
DUF4337	PF14235.6	gi|288560587|ref|YP_003424073.1|	-	0.077	13.1	0.0	0.077	13.1	0.0	1.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4337)
SBF	PF01758.16	gi|288560588|ref|YP_003424074.1|	-	9.6e-39	133.1	14.6	9.6e-39	133.1	14.6	2.3	1	1	1	2	2	2	2	Sodium	Bile	acid	symporter	family
SBF_like	PF13593.6	gi|288560588|ref|YP_003424074.1|	-	5.5e-24	85.1	27.0	6.3e-24	84.9	27.0	1.0	1	0	0	1	1	1	1	SBF-like	CPA	transporter	family	(DUF4137)
2HCT	PF03390.15	gi|288560588|ref|YP_003424074.1|	-	3.6	6.1	33.7	0.065	11.8	9.3	3.1	1	1	1	3	3	3	0	2-hydroxycarboxylate	transporter	family
E1-E2_ATPase	PF00122.20	gi|288560589|ref|YP_003424075.1|	-	7.2e-50	169.0	2.3	7.2e-50	169.0	2.3	2.2	2	0	0	2	2	2	1	E1-E2	ATPase
Hydrolase	PF00702.26	gi|288560589|ref|YP_003424075.1|	-	2.3e-37	129.3	0.2	3.8e-37	128.6	0.2	1.4	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
SPX	PF03105.19	gi|288560589|ref|YP_003424075.1|	-	0.0042	17.1	1.7	0.0042	17.1	1.7	2.2	2	0	0	2	2	2	1	SPX	domain
Hydrolase_3	PF08282.12	gi|288560589|ref|YP_003424075.1|	-	1.3	8.7	0.0	0.022	14.5	1.4	4.7	4	1	0	5	5	5	0	haloacid	dehalogenase-like	hydrolase
HTH_5	PF01022.20	gi|288560590|ref|YP_003424076.1|	-	2.5e-15	56.1	0.2	5.8e-15	54.9	0.2	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.7	gi|288560590|ref|YP_003424076.1|	-	1.4e-08	34.7	0.0	1.9e-08	34.3	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_34	PF13601.6	gi|288560590|ref|YP_003424076.1|	-	0.043	14.0	0.1	0.063	13.5	0.1	1.2	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
Sigma70_ECF	PF07638.11	gi|288560590|ref|YP_003424076.1|	-	0.045	13.7	0.0	0.053	13.4	0.0	1.1	1	0	0	1	1	1	0	ECF	sigma	factor
HTH_19	PF12844.7	gi|288560590|ref|YP_003424076.1|	-	0.095	12.7	0.2	9.7	6.3	0.0	2.2	2	0	0	2	2	2	0	Helix-turn-helix	domain
MarR_2	PF12802.7	gi|288560590|ref|YP_003424076.1|	-	0.1	12.5	0.0	0.15	12.0	0.0	1.3	1	0	0	1	1	1	0	MarR	family
HTH_23	PF13384.6	gi|288560590|ref|YP_003424076.1|	-	0.12	12.2	0.0	0.23	11.3	0.0	1.5	1	1	0	1	1	1	0	Homeodomain-like	domain
HTH_27	PF13463.6	gi|288560590|ref|YP_003424076.1|	-	0.13	12.8	0.0	0.25	11.9	0.0	1.5	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
DUF3800	PF12686.7	gi|288560591|ref|YP_003424077.1|	-	3.5e-18	66.4	8.3	5.9e-18	65.6	8.3	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3800)
Zn_peptidase_2	PF04298.12	gi|288560592|ref|YP_003424078.1|	-	0.68	9.3	5.1	0.76	9.1	5.1	1.1	1	0	0	1	1	1	0	Putative	neutral	zinc	metallopeptidase
His_biosynth	PF00977.21	gi|288560593|ref|YP_003424079.1|	-	8.4e-38	130.1	0.0	9.5e-38	129.9	0.0	1.0	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
PRAI	PF00697.22	gi|288560593|ref|YP_003424079.1|	-	0.00014	21.7	0.0	0.00026	20.8	0.0	1.4	1	0	0	1	1	1	1	N-(5'phosphoribosyl)anthranilate	(PRA)	isomerase
QRPTase_C	PF01729.19	gi|288560593|ref|YP_003424079.1|	-	0.043	13.6	0.0	0.092	12.5	0.0	1.6	1	1	0	1	1	1	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
Fe_dep_repr_C	PF02742.15	gi|288560594|ref|YP_003424080.1|	-	1.3e-22	79.6	0.6	3.9e-22	78.1	0.1	2.0	2	0	0	2	2	2	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
FeoA	PF04023.14	gi|288560594|ref|YP_003424080.1|	-	3.1e-14	53.0	0.0	6.3e-13	48.8	0.0	2.3	2	0	0	2	2	2	1	FeoA	domain
zinc_ribbon_2	PF13240.6	gi|288560595|ref|YP_003424081.1|	-	0.0078	15.9	0.2	0.0078	15.9	0.2	2.8	3	0	0	3	3	3	2	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|288560595|ref|YP_003424081.1|	-	0.041	13.3	0.5	0.041	13.3	0.5	3.3	3	1	0	3	3	3	0	zinc-ribbon	domain
DNA_RNApol_7kD	PF03604.13	gi|288560595|ref|YP_003424081.1|	-	0.043	13.5	12.3	0.94	9.2	4.9	3.2	1	1	2	3	3	3	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
UPF0547	PF10571.9	gi|288560595|ref|YP_003424081.1|	-	0.071	13.2	13.4	0.31	11.2	0.7	3.0	2	1	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zf-BED	PF02892.15	gi|288560595|ref|YP_003424081.1|	-	0.12	12.4	1.5	0.12	12.4	1.5	1.9	2	0	0	2	2	2	0	BED	zinc	finger
zinc_ribbon_4	PF13717.6	gi|288560595|ref|YP_003424081.1|	-	6.1	6.9	14.1	1.7	8.6	1.2	3.4	2	1	1	3	3	3	0	zinc-ribbon	domain
FeoB_N	PF02421.18	gi|288560596|ref|YP_003424082.1|	-	5.4e-53	178.7	1.2	9.9e-53	177.8	1.2	1.5	1	0	0	1	1	1	1	Ferrous	iron	transport	protein	B
Gate	PF07670.14	gi|288560596|ref|YP_003424082.1|	-	5.4e-24	84.6	21.0	3.5e-13	49.8	6.5	3.5	3	0	0	3	3	3	2	Nucleoside	recognition
MMR_HSR1	PF01926.23	gi|288560596|ref|YP_003424082.1|	-	2.3e-20	72.8	0.3	4.6e-20	71.8	0.3	1.5	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
FeoB_C	PF07664.12	gi|288560596|ref|YP_003424082.1|	-	6.3e-12	45.0	1.7	6.3e-12	45.0	1.7	3.7	3	0	0	3	3	3	1	Ferrous	iron	transport	protein	B	C	terminus
FeoB_Cyto	PF17910.1	gi|288560596|ref|YP_003424082.1|	-	9.9e-08	32.4	0.1	2.3e-07	31.2	0.1	1.7	1	0	0	1	1	1	1	FeoB	cytosolic	helical	domain
AIG1	PF04548.16	gi|288560596|ref|YP_003424082.1|	-	1.9e-06	27.3	0.1	3e-06	26.7	0.1	1.3	1	0	0	1	1	1	1	AIG1	family
SRPRB	PF09439.10	gi|288560596|ref|YP_003424082.1|	-	0.042	13.3	0.1	0.076	12.4	0.1	1.4	1	0	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
RsgA_GTPase	PF03193.16	gi|288560596|ref|YP_003424082.1|	-	0.044	13.7	0.3	2.2	8.2	0.1	2.5	2	0	0	2	2	2	0	RsgA	GTPase
Lipocalin_4	PF13648.6	gi|288560596|ref|YP_003424082.1|	-	1.3	10.0	3.4	1.7	9.6	1.7	2.0	2	0	0	2	2	2	0	Lipocalin-like	domain
FAD_binding_3	PF01494.19	gi|288560597|ref|YP_003424083.1|	-	5.3e-19	68.7	2.5	1.1e-16	61.1	0.6	2.5	2	1	0	2	2	2	2	FAD	binding	domain
DAO	PF01266.24	gi|288560597|ref|YP_003424083.1|	-	5e-09	36.2	2.5	0.0006	19.5	1.8	2.3	1	1	0	2	2	2	2	FAD	dependent	oxidoreductase
Trp_halogenase	PF04820.14	gi|288560597|ref|YP_003424083.1|	-	1.7e-07	30.5	0.0	0.00013	21.0	0.0	2.1	2	0	0	2	2	2	2	Tryptophan	halogenase
FAD_binding_2	PF00890.24	gi|288560597|ref|YP_003424083.1|	-	3.1e-07	29.8	2.1	1.1e-06	28.0	0.5	2.0	2	0	0	2	2	2	1	FAD	binding	domain
Lycopene_cycl	PF05834.12	gi|288560597|ref|YP_003424083.1|	-	3.4e-07	29.7	0.0	1.6e-05	24.2	0.0	2.2	2	0	0	2	2	2	1	Lycopene	cyclase	protein
FAD_oxidored	PF12831.7	gi|288560597|ref|YP_003424083.1|	-	2.6e-06	27.1	6.0	1.5e-05	24.5	5.9	2.0	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
HI0933_like	PF03486.14	gi|288560597|ref|YP_003424083.1|	-	6.2e-06	25.2	1.8	8.7e-06	24.7	0.4	1.7	2	0	0	2	2	2	1	HI0933-like	protein
Pyr_redox_2	PF07992.14	gi|288560597|ref|YP_003424083.1|	-	8.7e-06	25.2	2.2	2.3e-05	23.8	0.4	2.1	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.6	gi|288560597|ref|YP_003424083.1|	-	9e-05	22.6	0.1	0.00025	21.2	0.1	1.8	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
GIDA	PF01134.22	gi|288560597|ref|YP_003424083.1|	-	9.4e-05	21.7	0.7	0.00017	20.8	0.7	1.4	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
AlaDh_PNT_C	PF01262.21	gi|288560597|ref|YP_003424083.1|	-	0.00087	18.6	0.5	0.0018	17.6	0.5	1.4	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
Thi4	PF01946.17	gi|288560597|ref|YP_003424083.1|	-	0.0053	16.0	0.1	0.022	14.0	0.2	2.0	2	0	0	2	2	2	1	Thi4	family
Pyr_redox_3	PF13738.6	gi|288560597|ref|YP_003424083.1|	-	0.028	13.7	2.8	0.086	12.1	0.7	2.0	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
3HCDH_N	PF02737.18	gi|288560597|ref|YP_003424083.1|	-	0.059	13.2	0.1	0.12	12.2	0.1	1.5	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Pyr_redox	PF00070.27	gi|288560597|ref|YP_003424083.1|	-	0.073	13.6	0.1	1.3	9.7	0.1	2.4	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
XdhC_C	PF13478.6	gi|288560597|ref|YP_003424083.1|	-	0.15	12.6	0.0	0.33	11.5	0.0	1.7	1	0	0	1	1	1	0	XdhC	Rossmann	domain
NAD_binding_7	PF13241.6	gi|288560597|ref|YP_003424083.1|	-	0.17	12.4	0.2	0.32	11.4	0.2	1.7	1	1	0	1	1	1	0	Putative	NAD(P)-binding
Adeno_E1B_55K	PF01696.17	gi|288560598|ref|YP_003424084.1|	-	6.8e-05	21.7	4.8	6.8e-05	21.7	4.8	2.3	1	1	0	2	2	2	2	Adenovirus	EB1	55K	protein	/	large	t-antigen
Beta_helix	PF13229.6	gi|288560598|ref|YP_003424084.1|	-	0.01	15.7	24.7	0.023	14.5	13.0	2.2	1	1	1	2	2	2	0	Right	handed	beta	helix	region
DUF3099	PF11298.8	gi|288560599|ref|YP_003424085.1|	-	0.051	13.7	1.2	0.051	13.7	1.2	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3099)
SPC25	PF06703.11	gi|288560599|ref|YP_003424085.1|	-	8.7	6.1	9.4	1.7e+02	1.9	8.8	2.4	1	1	0	1	1	1	0	Microsomal	signal	peptidase	25	kDa	subunit	(SPC25)
CarboxypepD_reg	PF13620.6	gi|288560600|ref|YP_003424086.1|	-	4.1e-11	43.0	0.0	2.1e-05	24.7	0.0	2.3	2	0	0	2	2	2	2	Carboxypeptidase	regulatory-like	domain
TIR_2	PF13676.6	gi|288560600|ref|YP_003424086.1|	-	3.3e-10	40.6	0.0	6.4e-10	39.7	0.0	1.5	1	0	0	1	1	1	1	TIR	domain
CarbopepD_reg_2	PF13715.6	gi|288560600|ref|YP_003424086.1|	-	1.2e-08	34.8	1.4	5e-05	23.2	0.4	2.7	3	0	0	3	3	3	2	CarboxypepD_reg-like	domain
PEGA	PF08308.11	gi|288560600|ref|YP_003424086.1|	-	1.1e-07	31.6	0.1	0.0049	16.7	0.0	3.1	3	0	0	3	3	3	2	PEGA	domain
DUF2012	PF09430.10	gi|288560600|ref|YP_003424086.1|	-	1.3e-05	25.3	0.2	0.013	15.6	0.0	3.2	2	1	1	3	3	3	1	Protein	of	unknown	function	(DUF2012)
DUF2606	PF10794.9	gi|288560600|ref|YP_003424086.1|	-	0.0007	19.4	2.4	0.001	18.8	1.0	2.0	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF2606)
Fer4	PF00037.27	gi|288560601|ref|YP_003424087.1|	-	4.2e-10	39.0	14.8	1.6e-05	24.5	3.9	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Flavodoxin_3	PF12641.7	gi|288560601|ref|YP_003424087.1|	-	8.5e-07	28.8	0.5	1.1e-05	25.1	0.1	2.1	1	1	1	2	2	2	1	Flavodoxin	domain
Fer4_10	PF13237.6	gi|288560601|ref|YP_003424087.1|	-	1.1e-06	28.6	14.8	3.4e-06	27.1	15.1	1.7	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|288560601|ref|YP_003424087.1|	-	1.2e-06	29.4	7.4	0.0091	16.9	1.2	2.7	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_9	PF13187.6	gi|288560601|ref|YP_003424087.1|	-	5.4e-06	26.5	22.1	0.00013	22.1	11.7	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|288560601|ref|YP_003424087.1|	-	6.1e-06	26.7	13.5	0.0001	22.8	12.4	2.3	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Flavodoxin_5	PF12724.7	gi|288560601|ref|YP_003424087.1|	-	9.8e-06	25.9	0.0	1.7e-05	25.1	0.0	1.5	1	0	0	1	1	1	1	Flavodoxin	domain
Fer4_6	PF12837.7	gi|288560601|ref|YP_003424087.1|	-	2.7e-05	24.0	20.3	0.012	15.7	4.8	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|288560601|ref|YP_003424087.1|	-	4.9e-05	23.7	3.3	0.13	12.7	0.2	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|288560601|ref|YP_003424087.1|	-	0.00031	21.2	3.4	0.19	12.3	0.3	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|288560601|ref|YP_003424087.1|	-	0.0028	17.7	17.7	0.014	15.5	3.3	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_3	PF12798.7	gi|288560601|ref|YP_003424087.1|	-	0.0065	17.3	15.4	0.26	12.3	4.5	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|288560601|ref|YP_003424087.1|	-	0.013	15.9	11.2	0.21	12.2	1.6	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
AlaDh_PNT_C	PF01262.21	gi|288560601|ref|YP_003424087.1|	-	0.015	14.6	0.0	0.025	13.9	0.0	1.3	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
Fer4_21	PF14697.6	gi|288560601|ref|YP_003424087.1|	-	0.17	12.0	18.3	1.4	9.1	6.3	2.3	1	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|288560601|ref|YP_003424087.1|	-	1.3	9.6	17.5	1.4	9.5	4.6	2.5	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
DUF3194	PF11419.8	gi|288560602|ref|YP_003424088.1|	-	1.7e-28	98.8	13.0	1.9e-28	98.6	13.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3194)
NLE	PF08154.12	gi|288560602|ref|YP_003424088.1|	-	0.042	14.4	0.2	0.068	13.7	0.2	1.4	1	0	0	1	1	1	0	NLE	(NUC135)	domain
Ribosomal_S13	PF00416.22	gi|288560602|ref|YP_003424088.1|	-	0.061	13.7	3.4	0.35	11.3	0.2	2.0	1	1	1	2	2	2	0	Ribosomal	protein	S13/S18
VKG_Carbox	PF05090.14	gi|288560602|ref|YP_003424088.1|	-	0.15	10.9	0.1	0.17	10.7	0.1	1.1	1	0	0	1	1	1	0	Vitamin	K-dependent	gamma-carboxylase
Prefoldin_2	PF01920.20	gi|288560603|ref|YP_003424089.1|	-	1.4e-23	82.9	21.1	1.6e-23	82.7	21.1	1.0	1	0	0	1	1	1	1	Prefoldin	subunit
CLZ	PF16526.5	gi|288560603|ref|YP_003424089.1|	-	0.0099	16.2	5.5	0.0099	16.2	5.5	2.2	2	0	0	2	2	2	1	C-terminal	leucine	zipper	domain	of	cyclic	nucleotide-gated	channels
FlaC_arch	PF05377.11	gi|288560603|ref|YP_003424089.1|	-	0.051	14.0	5.1	0.051	14.0	5.1	2.6	2	1	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
Laminin_II	PF06009.12	gi|288560603|ref|YP_003424089.1|	-	0.17	11.9	13.7	0.27	11.2	13.7	1.4	1	1	0	1	1	1	0	Laminin	Domain	II
Borrelia_P83	PF05262.11	gi|288560603|ref|YP_003424089.1|	-	0.3	9.5	11.7	0.38	9.2	11.7	1.1	1	0	0	1	1	1	0	Borrelia	P83/100	protein
DHR10	PF18595.1	gi|288560603|ref|YP_003424089.1|	-	0.31	11.1	23.3	0.38	10.8	9.7	2.0	1	1	1	2	2	2	0	Designed	helical	repeat	protein	10	domain
Occludin_ELL	PF07303.13	gi|288560603|ref|YP_003424089.1|	-	0.48	11.2	12.0	1.6	9.5	2.5	2.1	1	1	1	2	2	2	0	Occludin	homology	domain
DUF3584	PF12128.8	gi|288560603|ref|YP_003424089.1|	-	0.62	7.5	16.1	0.7	7.3	16.1	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
Nup54	PF13874.6	gi|288560603|ref|YP_003424089.1|	-	0.83	9.7	15.6	4.1	7.5	15.6	1.9	1	1	0	1	1	1	0	Nucleoporin	complex	subunit	54
Cas_Cas1	PF01867.16	gi|288560603|ref|YP_003424089.1|	-	0.89	8.6	7.8	0.13	11.4	2.9	1.7	1	1	1	2	2	2	0	CRISPR	associated	protein	Cas1
Phage_GP20	PF06810.11	gi|288560603|ref|YP_003424089.1|	-	0.93	9.3	15.5	1.6	8.5	3.7	2.2	1	1	0	2	2	2	0	Phage	minor	structural	protein	GP20
DUF3450	PF11932.8	gi|288560603|ref|YP_003424089.1|	-	1.9	7.7	22.4	1.5	8.1	7.1	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3450)
eIF3_N	PF09440.10	gi|288560603|ref|YP_003424089.1|	-	2.9	8.4	15.2	0.39	11.1	5.4	2.0	1	1	1	2	2	2	0	eIF3	subunit	6	N	terminal	domain
DASH_Dam1	PF08653.10	gi|288560603|ref|YP_003424089.1|	-	3.5	7.5	5.6	2.2	8.2	0.9	2.7	2	2	1	3	3	3	0	DASH	complex	subunit	Dam1
XhlA	PF10779.9	gi|288560603|ref|YP_003424089.1|	-	4.5	7.5	10.6	1.4	9.2	3.2	2.7	1	1	1	3	3	3	0	Haemolysin	XhlA
EMP24_GP25L	PF01105.24	gi|288560603|ref|YP_003424089.1|	-	4.9	7.0	9.7	9.7	6.1	9.7	1.6	1	1	0	1	1	1	0	emp24/gp25L/p24	family/GOLD
Spc7	PF08317.11	gi|288560603|ref|YP_003424089.1|	-	6.1	5.6	19.3	11	4.8	19.3	1.3	1	1	0	1	1	1	0	Spc7	kinetochore	protein
Jnk-SapK_ap_N	PF09744.9	gi|288560603|ref|YP_003424089.1|	-	7.8	6.7	20.2	1	9.6	7.3	2.0	1	1	1	2	2	2	0	JNK_SAPK-associated	protein-1
COG2	PF06148.11	gi|288560603|ref|YP_003424089.1|	-	8.1	6.5	13.7	1.3	9.1	4.1	2.1	1	1	1	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
GvpG	PF05120.12	gi|288560603|ref|YP_003424089.1|	-	9.2	6.4	15.3	0.49	10.4	3.5	2.3	1	1	1	2	2	2	0	Gas	vesicle	protein	G
Pcc1	PF09341.10	gi|288560604|ref|YP_003424090.1|	-	3.2e-07	30.4	0.0	3.3e-07	30.3	0.0	1.0	1	0	0	1	1	1	1	Transcription	factor	Pcc1
DNA_RNApol_7kD	PF03604.13	gi|288560606|ref|YP_003424092.1|	-	9.4e-05	22.0	6.2	0.0002	21.0	6.2	1.5	1	1	0	1	1	1	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-ribbon_3	PF13248.6	gi|288560606|ref|YP_003424092.1|	-	0.00046	19.5	2.7	0.068	12.6	0.2	2.1	2	0	0	2	2	2	2	zinc-ribbon	domain
zf_UBZ	PF18439.1	gi|288560606|ref|YP_003424092.1|	-	0.00096	18.7	2.6	0.075	12.6	0.4	2.1	1	1	1	2	2	2	2	Ubiquitin-Binding	Zinc	Finger
DZR	PF12773.7	gi|288560606|ref|YP_003424092.1|	-	0.0014	18.6	1.2	0.0018	18.2	1.2	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-C4_Topoisom	PF01396.19	gi|288560606|ref|YP_003424092.1|	-	0.0016	18.2	4.2	0.51	10.2	0.3	2.2	2	0	0	2	2	2	2	Topoisomerase	DNA	binding	C4	zinc	finger
zinc_ribbon_2	PF13240.6	gi|288560606|ref|YP_003424092.1|	-	0.0023	17.6	6.2	0.02	14.6	6.2	2.0	1	1	0	1	1	1	1	zinc-ribbon	domain
Zn_ribbon_SprT	PF17283.2	gi|288560606|ref|YP_003424092.1|	-	0.0024	17.8	1.7	0.14	12.1	0.1	2.1	2	0	0	2	2	2	1	SprT-like	zinc	ribbon	domain
RNHCP	PF12647.7	gi|288560606|ref|YP_003424092.1|	-	0.0038	17.2	0.3	0.0039	17.1	0.3	1.0	1	0	0	1	1	1	1	RNHCP	domain
zf-C3HC4_3	PF13920.6	gi|288560606|ref|YP_003424092.1|	-	0.0055	16.5	1.5	0.0081	16.0	1.5	1.3	1	0	0	1	1	1	1	Zinc	finger,	C3HC4	type	(RING	finger)
HypA	PF01155.19	gi|288560606|ref|YP_003424092.1|	-	0.006	16.6	0.9	0.006	16.6	0.9	1.1	1	0	0	1	1	1	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zinc-ribbons_6	PF07191.12	gi|288560606|ref|YP_003424092.1|	-	0.0083	16.1	1.0	0.011	15.7	1.0	1.2	1	0	0	1	1	1	1	zinc-ribbons
zf-HIT	PF04438.16	gi|288560606|ref|YP_003424092.1|	-	0.016	15.0	4.7	0.45	10.4	0.1	2.1	2	0	0	2	2	2	0	HIT	zinc	finger
DNA_ligase_ZBD	PF03119.16	gi|288560606|ref|YP_003424092.1|	-	0.024	14.6	2.0	0.32	11.0	0.5	2.2	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Zn-ribbon_8	PF09723.10	gi|288560606|ref|YP_003424092.1|	-	0.027	14.6	6.0	0.041	14.0	6.0	1.5	1	1	0	1	1	1	0	Zinc	ribbon	domain
UPF0547	PF10571.9	gi|288560606|ref|YP_003424092.1|	-	0.029	14.5	5.7	0.32	11.1	0.9	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
OrfB_Zn_ribbon	PF07282.11	gi|288560606|ref|YP_003424092.1|	-	0.035	14.0	1.9	0.048	13.6	1.9	1.2	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
zf_C2H2_10	PF18414.1	gi|288560606|ref|YP_003424092.1|	-	0.038	13.5	4.6	0.71	9.5	0.7	2.2	2	0	0	2	2	2	0	C2H2	type	zinc-finger
YacG	PF03884.14	gi|288560606|ref|YP_003424092.1|	-	0.048	13.4	3.3	1.2	8.9	0.3	2.1	1	1	1	2	2	2	0	DNA	gyrase	inhibitor	YacG
Ribosomal_S27e	PF01667.17	gi|288560606|ref|YP_003424092.1|	-	0.057	13.1	1.6	2.6	7.8	0.1	2.1	2	0	0	2	2	2	0	Ribosomal	protein	S27
Ogr_Delta	PF04606.12	gi|288560606|ref|YP_003424092.1|	-	0.058	13.4	1.9	5.6	7.0	0.5	2.1	2	0	0	2	2	2	0	Ogr/Delta-like	zinc	finger
zf-C2H2	PF00096.26	gi|288560606|ref|YP_003424092.1|	-	0.091	13.3	2.5	0.67	10.5	0.1	2.2	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
TFIIS_C	PF01096.18	gi|288560606|ref|YP_003424092.1|	-	0.1	12.5	2.9	3.8	7.5	0.2	2.1	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zf-C2H2_4	PF13894.6	gi|288560606|ref|YP_003424092.1|	-	0.1	13.5	1.9	3.2	8.9	0.1	2.2	2	0	0	2	2	2	0	C2H2-type	zinc	finger
DUF1610	PF07754.11	gi|288560606|ref|YP_003424092.1|	-	0.22	11.5	6.2	0.4	10.7	0.9	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
zinc_ribbon_13	PF09855.9	gi|288560606|ref|YP_003424092.1|	-	0.23	11.7	2.3	0.25	11.5	0.1	1.8	1	1	1	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
zf-ACC	PF17848.1	gi|288560606|ref|YP_003424092.1|	-	0.26	11.4	8.4	0.42	10.7	0.3	2.3	2	1	0	2	2	2	0	Acetyl-coA	carboxylase	zinc	finger	domain
PhnA_Zn_Ribbon	PF08274.12	gi|288560606|ref|YP_003424092.1|	-	0.26	11.3	5.2	1.7	8.7	0.4	2.1	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
PADR1	PF08063.12	gi|288560606|ref|YP_003424092.1|	-	1	9.2	6.2	6.3	6.7	0.5	2.1	1	1	1	2	2	2	0	PADR1	(NUC008)	domain
zf-H2C2_2	PF13465.6	gi|288560606|ref|YP_003424092.1|	-	1.2	9.7	9.0	6.6	7.4	1.7	2.3	1	1	1	2	2	2	0	Zinc-finger	double	domain
zf-tcix	PF14952.6	gi|288560606|ref|YP_003424092.1|	-	1.2	8.9	6.4	1.3	8.7	0.1	2.2	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
TF_Zn_Ribbon	PF08271.12	gi|288560606|ref|YP_003424092.1|	-	1.2	8.7	9.3	20	4.8	9.7	2.0	1	1	1	2	2	2	0	TFIIB	zinc-binding
zf-TFIIB	PF13453.6	gi|288560606|ref|YP_003424092.1|	-	7	6.1	8.4	19	4.7	1.8	2.2	1	1	1	2	2	2	0	Transcription	factor	zinc-finger
Ribosomal_L37ae	PF01780.19	gi|288560607|ref|YP_003424093.1|	-	8.8e-35	118.7	6.1	9.6e-35	118.5	6.1	1.0	1	0	0	1	1	1	1	Ribosomal	L37ae	protein	family
Zn_Tnp_IS1595	PF12760.7	gi|288560607|ref|YP_003424093.1|	-	0.00046	20.1	2.6	0.00074	19.4	2.6	1.3	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
Zn-ribbon_8	PF09723.10	gi|288560607|ref|YP_003424093.1|	-	0.0094	16.1	0.5	1.9	8.7	0.2	2.2	2	0	0	2	2	2	1	Zinc	ribbon	domain
IBR	PF01485.21	gi|288560607|ref|YP_003424093.1|	-	0.021	15.0	1.1	0.03	14.5	1.1	1.2	1	0	0	1	1	1	0	IBR	domain,	a	half	RING-finger	domain
Rpr2	PF04032.16	gi|288560607|ref|YP_003424093.1|	-	0.041	14.1	1.8	0.69	10.2	0.2	2.1	1	1	1	2	2	2	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
zf-C2H2_3	PF13878.6	gi|288560607|ref|YP_003424093.1|	-	0.054	13.3	1.9	1.8	8.4	0.1	2.2	1	1	1	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
TF_Zn_Ribbon	PF08271.12	gi|288560607|ref|YP_003424093.1|	-	0.057	12.9	2.1	0.13	11.8	2.1	1.6	1	1	0	1	1	1	0	TFIIB	zinc-binding
Lambda_tail_I	PF06805.12	gi|288560607|ref|YP_003424093.1|	-	0.061	13.7	0.2	0.11	12.9	0.2	1.5	1	1	0	1	1	1	0	Bacteriophage	lambda	tail	assembly	protein	I
OrfB_Zn_ribbon	PF07282.11	gi|288560607|ref|YP_003424093.1|	-	0.064	13.2	1.3	0.1	12.5	1.3	1.4	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
zf-C2H2	PF00096.26	gi|288560607|ref|YP_003424093.1|	-	0.099	13.1	4.2	2.9	8.5	0.4	2.3	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
Rep_fac-A_C	PF08646.10	gi|288560607|ref|YP_003424093.1|	-	0.14	11.9	2.3	0.17	11.6	2.3	1.1	1	0	0	1	1	1	0	Replication	factor-A	C	terminal	domain
zf-H2C2_2	PF13465.6	gi|288560607|ref|YP_003424093.1|	-	0.27	11.7	7.4	7.5	7.2	2.7	2.3	1	1	1	2	2	2	0	Zinc-finger	double	domain
zf-C2H2_4	PF13894.6	gi|288560607|ref|YP_003424093.1|	-	0.28	12.1	2.3	27	5.9	0.2	2.4	2	0	0	2	2	2	0	C2H2-type	zinc	finger
Elf1	PF05129.13	gi|288560607|ref|YP_003424093.1|	-	0.28	11.2	4.6	0.53	10.4	4.6	1.5	1	1	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
zf-BED	PF02892.15	gi|288560607|ref|YP_003424093.1|	-	0.34	11.0	0.1	0.34	11.0	0.1	2.0	1	1	1	2	2	2	0	BED	zinc	finger
Mut7-C	PF01927.16	gi|288560607|ref|YP_003424093.1|	-	0.49	10.5	3.3	2.6	8.1	3.2	1.9	1	1	0	1	1	1	0	Mut7-C	RNAse	domain
RNase_PH	PF01138.21	gi|288560608|ref|YP_003424094.1|	-	1.1e-28	100.4	0.0	1.5e-28	99.9	0.0	1.2	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.15	gi|288560608|ref|YP_003424094.1|	-	9.5e-12	44.8	0.0	2.3e-11	43.6	0.0	1.7	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	2
RNase_PH	PF01138.21	gi|288560609|ref|YP_003424095.1|	-	1.8e-34	119.1	0.0	2.8e-34	118.4	0.0	1.3	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.15	gi|288560609|ref|YP_003424095.1|	-	7.3e-16	58.0	0.6	1.1e-15	57.4	0.6	1.3	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	2
KH_6	PF15985.5	gi|288560610|ref|YP_003424096.1|	-	1.4e-08	35.0	0.4	2.4e-08	34.2	0.4	1.4	1	0	0	1	1	1	1	KH	domain
KH_1	PF00013.29	gi|288560610|ref|YP_003424096.1|	-	3.2e-08	33.3	1.7	1e-07	31.7	1.7	1.9	1	0	0	1	1	1	1	KH	domain
ECR1_N	PF14382.6	gi|288560610|ref|YP_003424096.1|	-	2.2e-07	30.5	0.0	4.1e-07	29.7	0.0	1.4	1	0	0	1	1	1	1	Exosome	complex	exonuclease	RRP4	N-terminal	region
KH_2	PF07650.17	gi|288560610|ref|YP_003424096.1|	-	0.00097	18.9	3.6	0.00097	18.9	3.6	2.4	2	0	0	2	2	2	1	KH	domain
S1	PF00575.23	gi|288560610|ref|YP_003424096.1|	-	0.025	14.9	0.9	0.025	14.9	0.9	2.4	2	0	0	2	2	2	0	S1	RNA	binding	domain
KH_4	PF13083.6	gi|288560610|ref|YP_003424096.1|	-	0.05	13.5	0.3	0.25	11.2	0.3	2.3	1	0	0	1	1	1	0	KH	domain
SBDS	PF01172.18	gi|288560611|ref|YP_003424097.1|	-	6e-24	83.9	0.3	1.1e-23	83.0	0.3	1.5	1	0	0	1	1	1	1	Shwachman-Bodian-Diamond	syndrome	(SBDS)	protein
SBDS_C	PF09377.10	gi|288560611|ref|YP_003424097.1|	-	4.3e-16	59.0	0.1	6.8e-16	58.3	0.1	1.3	1	0	0	1	1	1	1	SBDS	protein	C-terminal	domain
Proteasome	PF00227.26	gi|288560613|ref|YP_003424099.1|	-	2e-61	206.8	0.3	2e-61	206.8	0.3	2.0	2	0	0	2	2	2	1	Proteasome	subunit
Proteasome_A_N	PF10584.9	gi|288560613|ref|YP_003424099.1|	-	1.6e-14	53.2	0.5	5.1e-14	51.6	0.1	2.0	2	0	0	2	2	2	1	Proteasome	subunit	A	N-terminal	signature
DUF5331	PF17265.2	gi|288560613|ref|YP_003424099.1|	-	0.28	10.9	1.3	0.43	10.3	0.0	2.0	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5331)
DUF3349	PF11829.8	gi|288560613|ref|YP_003424099.1|	-	0.54	11.1	5.5	1.3	9.8	2.5	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3349)
EF-G-binding_N	PF07299.11	gi|288560613|ref|YP_003424099.1|	-	2.9	8.5	5.9	3.5	8.2	2.5	2.2	2	0	0	2	2	2	0	Elongation	factor	G-binding	protein,	N-terminal
Big_1	PF02369.16	gi|288560614|ref|YP_003424100.1|	-	2.5e-23	81.9	10.6	0.00022	21.1	0.3	6.9	6	1	0	6	6	6	5	Bacterial	Ig-like	domain	(group	1)
CarboxypepD_reg	PF13620.6	gi|288560614|ref|YP_003424100.1|	-	4.5e-20	71.7	7.5	0.0011	19.2	0.0	6.4	6	0	0	6	6	6	5	Carboxypeptidase	regulatory-like	domain
Big_3_5	PF16640.5	gi|288560614|ref|YP_003424100.1|	-	2.3e-16	59.8	24.5	0.00058	20.0	3.9	5.6	4	1	1	5	5	5	4	Bacterial	Ig-like	domain	(group	3)
MG4	PF17789.1	gi|288560614|ref|YP_003424100.1|	-	4.7e-16	58.7	9.7	0.0048	17.0	0.0	6.5	6	0	0	6	6	6	5	Macroglobulin	domain	MG4
Invasin_D3	PF09134.10	gi|288560614|ref|YP_003424100.1|	-	1e-12	48.2	34.2	0.0001	22.6	0.2	6.6	6	0	0	6	6	6	4	Invasin,	domain	3
CarbopepD_reg_2	PF13715.6	gi|288560614|ref|YP_003424100.1|	-	1.5e-07	31.3	35.8	0.029	14.4	0.1	6.3	6	1	0	6	6	6	5	CarboxypepD_reg-like	domain
SpaA	PF17802.1	gi|288560614|ref|YP_003424100.1|	-	8.1e-07	29.3	39.7	0.015	15.6	3.3	6.3	4	3	0	4	4	4	3	Prealbumin-like	fold	domain
DUF4198	PF10670.9	gi|288560614|ref|YP_003424100.1|	-	0.0039	17.6	1.1	1.8	8.9	0.0	4.1	5	0	0	5	5	5	1	Domain	of	unknown	function	(DUF4198)
SBBP	PF06739.11	gi|288560614|ref|YP_003424100.1|	-	0.0043	17.0	3.2	0.0098	15.9	0.1	3.5	3	0	0	3	3	3	1	Beta-propeller	repeat
phage_tail_N	PF08400.10	gi|288560614|ref|YP_003424100.1|	-	0.071	13.1	4.2	8.4	6.4	0.0	4.7	6	0	0	6	6	6	0	Prophage	tail	fibre	N-terminal
DUF4044	PF13253.6	gi|288560614|ref|YP_003424100.1|	-	0.25	10.9	2.4	0.62	9.6	2.4	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4044)
Pilin_N	PF07790.11	gi|288560614|ref|YP_003424100.1|	-	0.72	10.8	11.6	20	6.2	0.1	5.3	4	1	1	5	5	5	0	Archaeal	Type	IV	pilin,	N-terminal
RNase_P_Rpp14	PF01900.19	gi|288560615|ref|YP_003424101.1|	-	8.6e-16	58.1	0.1	1.1e-15	57.7	0.1	1.1	1	0	0	1	1	1	1	Rpp14/Pop5	family
Peptidase_M99	PF17033.5	gi|288560615|ref|YP_003424101.1|	-	0.016	14.7	0.1	0.016	14.6	0.1	1.1	1	0	0	1	1	1	0	Carboxypeptidase	controlling	helical	cell	shape	catalytic
RNase_P_p30	PF01876.16	gi|288560616|ref|YP_003424102.1|	-	2e-34	118.9	0.7	2.7e-34	118.5	0.7	1.1	1	0	0	1	1	1	1	RNase	P	subunit	p30
RNA_binding	PF01877.17	gi|288560617|ref|YP_003424103.1|	-	7e-33	113.4	1.5	9.7e-33	113.0	1.5	1.2	1	0	0	1	1	1	1	RNA	binding
TTRAP	PF14203.6	gi|288560617|ref|YP_003424103.1|	-	0.082	12.9	2.4	14	5.7	0.0	2.3	2	0	0	2	2	2	0	Putative	tranposon-transfer	assisting	protein
Ribosomal_L15e	PF00827.17	gi|288560618|ref|YP_003424104.1|	-	9.8e-85	283.1	11.2	1.1e-84	283.0	11.2	1.0	1	0	0	1	1	1	1	Ribosomal	L15
zf-ribbon_3	PF13248.6	gi|288560619|ref|YP_003424105.1|	-	2.5e-18	64.8	26.1	1.5e-07	30.5	3.1	3.5	3	1	0	3	3	3	3	zinc-ribbon	domain
DZR	PF12773.7	gi|288560619|ref|YP_003424105.1|	-	5.3e-16	58.4	15.8	1.8e-08	34.3	9.6	2.2	2	0	0	2	2	2	2	Double	zinc	ribbon
zinc_ribbon_2	PF13240.6	gi|288560619|ref|YP_003424105.1|	-	1.2e-14	53.5	28.2	3.9e-08	32.7	2.9	4.5	4	1	1	5	5	5	4	zinc-ribbon	domain
Zn-ribbon_8	PF09723.10	gi|288560619|ref|YP_003424105.1|	-	1.5e-08	34.6	20.4	0.0018	18.3	4.0	4.3	2	2	2	4	4	4	3	Zinc	ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|288560619|ref|YP_003424105.1|	-	6.9e-08	31.9	24.6	0.0025	17.3	2.5	4.8	2	2	1	4	4	4	3	TFIIB	zinc-binding
zinc_ribbon_15	PF17032.5	gi|288560619|ref|YP_003424105.1|	-	9e-08	32.8	16.3	0.019	15.7	0.7	3.2	3	0	0	3	3	3	3	zinc-ribbon	family
UPF0547	PF10571.9	gi|288560619|ref|YP_003424105.1|	-	1.2e-07	31.7	12.6	0.012	15.7	2.2	4.1	4	0	0	4	4	4	2	Uncharacterised	protein	family	UPF0547
zinc-ribbons_6	PF07191.12	gi|288560619|ref|YP_003424105.1|	-	4.6e-07	29.7	13.2	0.00033	20.6	1.6	3.1	1	1	2	3	3	3	3	zinc-ribbons
YhfH	PF14149.6	gi|288560619|ref|YP_003424105.1|	-	1.4e-06	28.1	15.4	0.76	9.8	0.3	6.2	5	1	1	6	6	6	2	YhfH-like	protein
zf-C4_Topoisom	PF01396.19	gi|288560619|ref|YP_003424105.1|	-	1.5e-05	24.7	18.8	1.9	8.3	0.1	6.6	7	0	0	7	7	7	1	Topoisomerase	DNA	binding	C4	zinc	finger
HypA	PF01155.19	gi|288560619|ref|YP_003424105.1|	-	2.3e-05	24.4	15.7	0.16	12.0	1.9	3.3	1	1	2	3	3	3	3	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zf-RING_7	PF02591.15	gi|288560619|ref|YP_003424105.1|	-	3.9e-05	23.7	21.0	3	8.1	0.1	6.2	6	0	0	6	6	6	0	C4-type	zinc	ribbon	domain
DUF2321	PF10083.9	gi|288560619|ref|YP_003424105.1|	-	4.8e-05	23.0	6.0	4.8e-05	23.0	6.0	1.5	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2321)
OrfB_Zn_ribbon	PF07282.11	gi|288560619|ref|YP_003424105.1|	-	7.1e-05	22.7	22.1	0.021	14.7	2.2	4.5	1	1	4	5	5	5	3	Putative	transposase	DNA-binding	domain
Prok-RING_1	PF14446.6	gi|288560619|ref|YP_003424105.1|	-	7.2e-05	22.6	25.5	0.032	14.2	1.5	4.1	2	1	2	4	4	4	3	Prokaryotic	RING	finger	family	1
PolC_DP2	PF03833.13	gi|288560619|ref|YP_003424105.1|	-	0.00019	19.5	4.5	0.00019	19.5	4.5	2.2	1	1	1	2	2	2	1	DNA	polymerase	II	large	subunit	DP2
zinc-ribbon_6	PF10005.9	gi|288560619|ref|YP_003424105.1|	-	0.00019	22.0	10.2	0.23	12.2	0.2	3.1	2	1	1	3	3	3	1	zinc-ribbon	domain
DUF2116	PF09889.9	gi|288560619|ref|YP_003424105.1|	-	0.00021	21.2	12.6	0.056	13.4	0.1	3.4	2	1	1	3	3	3	2	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
tRNA-synt_1g	PF09334.11	gi|288560619|ref|YP_003424105.1|	-	0.0012	17.7	0.3	0.0012	17.7	0.3	2.0	1	1	1	2	2	2	1	tRNA	synthetases	class	I	(M)
DUF4428	PF14471.6	gi|288560619|ref|YP_003424105.1|	-	0.0025	17.7	17.6	0.028	14.4	1.0	3.8	1	1	2	3	3	3	2	Domain	of	unknown	function	(DUF4428)
Cys_rich_CPXG	PF14255.6	gi|288560619|ref|YP_003424105.1|	-	0.0026	17.6	13.2	6	6.9	1.6	5.5	5	1	0	5	5	5	0	Cysteine-rich	CPXCG
zf-LITAF-like	PF10601.9	gi|288560619|ref|YP_003424105.1|	-	0.0029	17.8	19.0	0.83	10.0	0.0	5.3	2	2	2	5	5	5	1	LITAF-like	zinc	ribbon	domain
Nudix_N_2	PF14803.6	gi|288560619|ref|YP_003424105.1|	-	0.0049	16.8	19.1	1.2	9.1	1.8	5.4	4	2	1	5	5	5	1	Nudix	N-terminal
zf_UBZ	PF18439.1	gi|288560619|ref|YP_003424105.1|	-	0.005	16.4	22.2	3.1	7.5	0.2	6.0	3	3	3	6	6	6	0	Ubiquitin-Binding	Zinc	Finger
DNA_ligase_ZBD	PF03119.16	gi|288560619|ref|YP_003424105.1|	-	0.0075	16.3	18.1	1.5	8.9	0.2	4.7	4	1	0	4	4	4	1	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-C3HC4_3	PF13920.6	gi|288560619|ref|YP_003424105.1|	-	0.011	15.5	15.5	1.1	9.2	0.4	4.1	3	1	1	4	4	4	0	Zinc	finger,	C3HC4	type	(RING	finger)
zf-FPG_IleRS	PF06827.14	gi|288560619|ref|YP_003424105.1|	-	0.015	15.2	17.9	3.3	7.6	0.0	5.8	5	1	1	6	6	6	0	Zinc	finger	found	in	FPG	and	IleRS
zf-ISL3	PF14690.6	gi|288560619|ref|YP_003424105.1|	-	0.016	15.8	14.0	8.7	7.1	0.1	5.6	6	0	0	6	6	6	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Zn_ribbon_17	PF17120.5	gi|288560619|ref|YP_003424105.1|	-	0.04	13.6	10.5	1.3	8.7	0.3	3.1	2	1	1	3	3	3	0	Zinc-ribbon,	C4HC2	type
bZIP_1	PF00170.21	gi|288560619|ref|YP_003424105.1|	-	0.059	13.5	0.1	0.11	12.6	0.1	1.3	1	0	0	1	1	1	0	bZIP	transcription	factor
zf-IS66	PF13005.7	gi|288560619|ref|YP_003424105.1|	-	0.059	13.8	21.4	3.4	8.1	0.2	5.9	4	1	2	6	6	6	0	zinc-finger	binding	domain	of	transposase	IS66
Acetone_carb_G	PF08882.11	gi|288560619|ref|YP_003424105.1|	-	0.071	13.3	5.9	0.6	10.3	0.4	3.6	1	1	2	3	3	3	0	Acetone	carboxylase	gamma	subunit
Rad50_zn_hook	PF04423.14	gi|288560619|ref|YP_003424105.1|	-	0.083	12.7	15.9	0.38	10.6	0.1	4.6	2	2	3	5	5	5	0	Rad50	zinc	hook	motif
DUF1474	PF07342.11	gi|288560619|ref|YP_003424105.1|	-	0.086	13.4	0.2	0.29	11.7	0.1	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1474)
C1_1	PF00130.22	gi|288560619|ref|YP_003424105.1|	-	0.095	12.6	12.4	2.8	7.9	1.4	4.3	1	1	3	4	4	4	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
DUF555	PF04475.12	gi|288560619|ref|YP_003424105.1|	-	0.1	13.0	2.4	12	6.3	0.1	3.3	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF555)
Ogr_Delta	PF04606.12	gi|288560619|ref|YP_003424105.1|	-	0.12	12.3	16.1	7.6	6.6	0.1	5.7	6	0	0	6	6	6	0	Ogr/Delta-like	zinc	finger
DUF2089	PF09862.9	gi|288560619|ref|YP_003424105.1|	-	0.15	12.1	6.6	1.2	9.1	0.4	3.1	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2089)
TackOD1	PF18551.1	gi|288560619|ref|YP_003424105.1|	-	0.2	11.3	16.6	0.22	11.2	3.1	2.8	1	1	1	2	2	2	0	Thaumarchaeal	output	domain	1
NinF	PF05810.12	gi|288560619|ref|YP_003424105.1|	-	0.22	11.4	10.7	1.3	9.0	1.6	3.5	1	1	3	4	4	4	0	NinF	protein
Zn_Tnp_IS1595	PF12760.7	gi|288560619|ref|YP_003424105.1|	-	0.24	11.4	24.4	0.83	9.7	0.1	5.2	2	1	3	5	5	4	0	Transposase	zinc-ribbon	domain
zf-ACC	PF17848.1	gi|288560619|ref|YP_003424105.1|	-	0.24	11.5	27.5	1	9.5	0.5	6.2	5	1	1	6	6	6	0	Acetyl-coA	carboxylase	zinc	finger	domain
zf-NADH-PPase	PF09297.11	gi|288560619|ref|YP_003424105.1|	-	0.29	10.8	20.6	19	5.0	4.3	5.8	5	1	0	5	5	5	0	NADH	pyrophosphatase	zinc	ribbon	domain
zf-C2H2_9	PF16293.5	gi|288560619|ref|YP_003424105.1|	-	0.3	11.0	15.1	2.1	8.2	0.1	4.7	3	2	2	5	5	5	0	C2H2	type	zinc-finger	(1	copy)
zf-tcix	PF14952.6	gi|288560619|ref|YP_003424105.1|	-	0.65	9.7	28.6	0.12	12.0	1.9	4.9	4	2	0	4	4	4	0	Putative	treble-clef,	zinc-finger,	Zn-binding
NRDD	PF13597.6	gi|288560619|ref|YP_003424105.1|	-	0.82	8.4	16.4	0.98	8.1	0.9	3.1	1	1	2	3	3	3	0	Anaerobic	ribonucleoside-triphosphate	reductase
zf-RRN7	PF11781.8	gi|288560619|ref|YP_003424105.1|	-	0.85	9.4	20.9	4.7	7.0	0.0	5.8	5	1	1	6	6	6	0	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
DNA_RNApol_7kD	PF03604.13	gi|288560619|ref|YP_003424105.1|	-	0.85	9.3	21.7	8.7	6.1	0.1	5.4	3	2	2	5	5	5	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-Di19	PF05605.12	gi|288560619|ref|YP_003424105.1|	-	0.92	9.9	14.4	9.5	6.6	0.3	4.3	1	1	4	5	5	5	0	Drought	induced	19	protein	(Di19),	zinc-binding
CpXC	PF14353.6	gi|288560619|ref|YP_003424105.1|	-	1	9.4	20.1	0.43	10.6	4.9	4.0	1	1	3	4	4	4	0	CpXC	protein
RNA_POL_M_15KD	PF02150.16	gi|288560619|ref|YP_003424105.1|	-	1.1	9.1	23.2	21	5.1	3.6	5.8	3	1	3	6	6	6	0	RNA	polymerases	M/15	Kd	subunit
FYDLN_acid	PF09538.10	gi|288560619|ref|YP_003424105.1|	-	1.2	9.8	13.1	3.6	8.3	1.8	3.4	1	1	2	3	3	3	0	Protein	of	unknown	function	(FYDLN_acid)
Zn_ribbon_SprT	PF17283.2	gi|288560619|ref|YP_003424105.1|	-	1.4	8.9	14.5	0.93	9.5	1.0	4.2	5	1	0	5	5	3	0	SprT-like	zinc	ribbon	domain
Auto_anti-p27	PF06677.12	gi|288560619|ref|YP_003424105.1|	-	1.5	9.1	21.4	1.5	9.0	1.2	4.1	2	1	2	4	4	4	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
TFIIS_C	PF01096.18	gi|288560619|ref|YP_003424105.1|	-	1.5	8.7	20.2	35	4.4	0.1	5.9	6	0	0	6	6	6	0	Transcription	factor	S-II	(TFIIS)
zf-C4H2	PF10146.9	gi|288560619|ref|YP_003424105.1|	-	2.1	8.6	12.3	0.21	11.9	0.6	2.9	2	2	2	4	4	2	0	Zinc	finger-containing	protein
DUF4452	PF14618.6	gi|288560619|ref|YP_003424105.1|	-	2.1	8.2	4.2	13	5.6	0.4	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4452)
RecR	PF02132.15	gi|288560619|ref|YP_003424105.1|	-	2.3	7.8	21.7	4.8	6.8	1.4	4.3	2	1	1	3	3	3	0	RecR	protein
zf-MYND	PF01753.18	gi|288560619|ref|YP_003424105.1|	-	2.5	8.3	13.4	7.3	6.8	0.4	3.4	2	2	0	2	2	2	0	MYND	finger
Cript	PF10235.9	gi|288560619|ref|YP_003424105.1|	-	2.8	8.6	14.4	4.9	7.8	0.7	4.3	1	1	1	2	2	2	0	Microtubule-associated	protein	CRIPT
zinc_ribbon_10	PF10058.9	gi|288560619|ref|YP_003424105.1|	-	3.1	7.6	20.4	0.16	11.7	0.7	4.6	6	0	0	6	6	5	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
Ribosomal_L32p	PF01783.23	gi|288560619|ref|YP_003424105.1|	-	3.3	8.1	14.0	4.5	7.6	0.3	4.0	1	1	2	3	3	3	0	Ribosomal	L32p	protein	family
C1_2	PF03107.16	gi|288560619|ref|YP_003424105.1|	-	3.5	8.0	18.3	0.77	10.1	0.9	3.4	1	1	2	3	3	3	0	C1	domain
DUF2318	PF10080.9	gi|288560619|ref|YP_003424105.1|	-	3.5	7.8	15.0	5.2	7.3	0.8	3.5	1	1	2	3	3	3	0	Predicted	membrane	protein	(DUF2318)
Zn_Tnp_IS91	PF14319.6	gi|288560619|ref|YP_003424105.1|	-	3.5	7.7	15.1	0.45	10.6	2.5	3.4	1	1	2	3	3	3	0	Transposase	zinc-binding	domain
zinc_ribbon_9	PF14369.6	gi|288560619|ref|YP_003424105.1|	-	3.7	7.9	29.0	3.4	8.0	0.1	5.4	3	2	2	5	5	5	0	zinc-ribbon
zf-HYPF	PF07503.12	gi|288560619|ref|YP_003424105.1|	-	4.2	7.2	20.9	30	4.5	0.3	5.9	6	0	0	6	6	6	0	HypF	finger
zinc_ribbon_4	PF13717.6	gi|288560619|ref|YP_003424105.1|	-	4.3	7.3	24.5	9.5	6.2	0.0	6.0	4	2	0	4	4	4	0	zinc-ribbon	domain
zf-RING_2	PF13639.6	gi|288560619|ref|YP_003424105.1|	-	4.5	7.7	16.2	6.4	7.2	4.5	3.0	2	2	0	2	2	2	0	Ring	finger	domain
zf-C3H2C3	PF17122.5	gi|288560619|ref|YP_003424105.1|	-	5.6	7.1	31.0	3.5	7.7	0.2	6.1	5	1	2	7	7	7	0	Zinc-finger
zf_C2H2_10	PF18414.1	gi|288560619|ref|YP_003424105.1|	-	6.7	6.3	10.6	23	4.7	0.1	4.2	4	0	0	4	4	4	0	C2H2	type	zinc-finger
DUF1451	PF07295.11	gi|288560619|ref|YP_003424105.1|	-	6.9	6.7	18.6	0.079	13.0	3.7	3.3	2	2	1	3	3	3	0	Zinc-ribbon	containing	domain
Lar_restr_allev	PF14354.6	gi|288560619|ref|YP_003424105.1|	-	7	7.1	23.6	1.7	9.1	5.2	4.7	2	2	1	3	3	3	0	Restriction	alleviation	protein	Lar
zf-RING_5	PF14634.6	gi|288560619|ref|YP_003424105.1|	-	7.3	6.6	20.8	15	5.6	1.6	4.1	3	1	1	4	4	4	0	zinc-RING	finger	domain
zf-TFIIB	PF13453.6	gi|288560619|ref|YP_003424105.1|	-	8	5.9	24.5	0.67	9.3	3.5	4.6	4	2	1	5	5	4	0	Transcription	factor	zinc-finger
NOB1_Zn_bind	PF08772.11	gi|288560619|ref|YP_003424105.1|	-	9.7	6.4	23.4	11	6.3	2.5	4.4	1	1	2	3	3	3	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
zinc_ribbon_2	PF13240.6	gi|288560620|ref|YP_003424106.1|	-	2e-08	33.7	18.8	4.1e-05	23.1	5.6	2.9	2	1	0	2	2	2	2	zinc-ribbon	domain
SHOCT	PF09851.9	gi|288560620|ref|YP_003424106.1|	-	4.2e-08	32.7	4.5	9.5e-08	31.5	4.5	1.7	1	0	0	1	1	1	1	Short	C-terminal	domain
zf-ribbon_3	PF13248.6	gi|288560620|ref|YP_003424106.1|	-	1.2e-07	30.9	13.5	6.2e-05	22.2	2.0	2.5	2	0	0	2	2	2	2	zinc-ribbon	domain
DZR	PF12773.7	gi|288560620|ref|YP_003424106.1|	-	4.3e-07	29.9	10.5	7.1e-07	29.2	10.5	1.4	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc-ribbons_6	PF07191.12	gi|288560620|ref|YP_003424106.1|	-	0.0067	16.4	3.4	1.7	8.7	0.3	2.3	2	0	0	2	2	2	2	zinc-ribbons
GvpG	PF05120.12	gi|288560620|ref|YP_003424106.1|	-	0.064	13.3	0.3	0.14	12.2	0.3	1.6	1	0	0	1	1	1	0	Gas	vesicle	protein	G
PolC_DP2	PF03833.13	gi|288560620|ref|YP_003424106.1|	-	0.11	10.3	1.3	0.16	9.8	1.3	1.4	1	0	0	1	1	1	0	DNA	polymerase	II	large	subunit	DP2
PAP_central	PF04928.17	gi|288560620|ref|YP_003424106.1|	-	0.13	11.2	0.1	0.21	10.5	0.1	1.2	1	0	0	1	1	1	0	Poly(A)	polymerase	central	domain
zf-tcix	PF14952.6	gi|288560620|ref|YP_003424106.1|	-	0.18	11.4	13.0	0.83	9.3	3.9	2.4	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
TF_Zn_Ribbon	PF08271.12	gi|288560620|ref|YP_003424106.1|	-	0.46	10.0	14.9	0.15	11.6	2.8	3.1	1	1	1	2	2	2	0	TFIIB	zinc-binding
zinc_ribbon_15	PF17032.5	gi|288560620|ref|YP_003424106.1|	-	0.46	11.3	11.8	5.7	7.8	11.8	2.3	1	1	0	1	1	1	0	zinc-ribbon	family
OrfB_Zn_ribbon	PF07282.11	gi|288560620|ref|YP_003424106.1|	-	0.47	10.4	11.7	0.26	11.2	2.0	2.5	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
CpXC	PF14353.6	gi|288560620|ref|YP_003424106.1|	-	0.53	10.3	4.6	0.81	9.7	2.4	2.4	2	1	0	2	2	2	0	CpXC	protein
zf-CHY	PF05495.12	gi|288560620|ref|YP_003424106.1|	-	1.2	9.7	6.1	12	6.4	6.1	2.2	1	1	0	1	1	1	0	CHY	zinc	finger
zf-CCHC_6	PF15288.6	gi|288560620|ref|YP_003424106.1|	-	2.5	8.0	5.1	2	8.4	0.4	2.7	3	0	0	3	3	3	0	Zinc	knuckle
zf-dskA_traR	PF01258.17	gi|288560620|ref|YP_003424106.1|	-	3.4	7.7	11.3	8.7	6.4	0.0	3.9	3	1	1	4	4	4	0	Prokaryotic	dksA/traR	C4-type	zinc	finger
zf-C3H2C3	PF17122.5	gi|288560620|ref|YP_003424106.1|	-	5.4	7.1	9.0	0.37	10.9	4.0	1.7	2	0	0	2	2	2	0	Zinc-finger
Prok-RING_1	PF14446.6	gi|288560620|ref|YP_003424106.1|	-	6	6.9	12.7	0.31	11.0	2.5	3.0	1	1	2	3	3	3	0	Prokaryotic	RING	finger	family	1
zf_UBZ	PF18439.1	gi|288560620|ref|YP_003424106.1|	-	6.4	6.5	7.0	46	3.7	0.2	3.6	3	1	1	4	4	4	0	Ubiquitin-Binding	Zinc	Finger
zf-B_box	PF00643.24	gi|288560620|ref|YP_003424106.1|	-	9.1	6.5	6.8	2.9	8.1	0.4	2.4	2	1	0	2	2	2	0	B-box	zinc	finger
HTH_45	PF14947.6	gi|288560622|ref|YP_003424108.1|	-	4.1e-08	33.1	0.3	8.9e-08	32.0	0.3	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_27	PF13463.6	gi|288560622|ref|YP_003424108.1|	-	2.9e-06	27.7	0.0	4.5e-06	27.1	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_5	PF01022.20	gi|288560622|ref|YP_003424108.1|	-	0.00029	20.7	0.3	0.0005	19.9	0.3	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
DUF4364	PF14277.6	gi|288560622|ref|YP_003424108.1|	-	0.0078	16.0	0.1	0.0078	16.0	0.1	2.6	3	1	1	4	4	4	1	Domain	of	unknown	function	(DUF4364)
HTH_34	PF13601.6	gi|288560622|ref|YP_003424108.1|	-	0.013	15.6	0.0	0.027	14.7	0.0	1.4	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
DUF1495	PF07381.11	gi|288560622|ref|YP_003424108.1|	-	0.02	14.7	0.2	0.44	10.4	0.2	2.3	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain	(DUF1495)
PadR	PF03551.14	gi|288560622|ref|YP_003424108.1|	-	0.032	14.2	0.2	0.097	12.6	0.0	2.0	2	1	0	2	2	2	0	Transcriptional	regulator	PadR-like	family
DivIVA	PF05103.13	gi|288560622|ref|YP_003424108.1|	-	0.043	13.9	1.0	0.093	12.8	1.0	1.5	1	0	0	1	1	1	0	DivIVA	protein
IFP_35_N	PF07334.13	gi|288560622|ref|YP_003424108.1|	-	0.059	13.4	2.5	0.28	11.3	0.8	2.3	2	1	0	2	2	2	0	Interferon-induced	35	kDa	protein	(IFP	35)	N-terminus
Neuregulin	PF02158.15	gi|288560622|ref|YP_003424108.1|	-	0.082	12.3	0.7	0.089	12.1	0.7	1.2	1	0	0	1	1	1	0	Neuregulin	intracellular	region
TrmB	PF01978.19	gi|288560622|ref|YP_003424108.1|	-	0.085	12.8	0.0	0.14	12.0	0.0	1.3	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
bZIP_1	PF00170.21	gi|288560622|ref|YP_003424108.1|	-	0.26	11.4	7.0	0.31	11.2	3.2	2.5	2	1	1	3	3	3	0	bZIP	transcription	factor
Rubrerythrin	PF02915.17	gi|288560623|ref|YP_003424109.1|	-	1.8e-24	86.7	6.9	5.2e-23	82.0	6.9	2.1	1	1	0	1	1	1	1	Rubrerythrin
Ferritin	PF00210.24	gi|288560623|ref|YP_003424109.1|	-	1.6e-05	24.9	4.7	0.00039	20.4	4.7	2.1	1	1	0	1	1	1	1	Ferritin-like	domain
Ferritin_2	PF13668.6	gi|288560623|ref|YP_003424109.1|	-	0.0048	17.1	1.5	0.0068	16.6	1.5	1.3	1	0	0	1	1	1	1	Ferritin-like	domain
COQ7	PF03232.13	gi|288560623|ref|YP_003424109.1|	-	0.018	14.8	0.1	0.054	13.3	0.0	1.7	1	1	1	2	2	2	0	Ubiquinone	biosynthesis	protein	COQ7
zf-C2HC5	PF06221.13	gi|288560623|ref|YP_003424109.1|	-	0.021	14.8	0.2	0.034	14.1	0.2	1.3	1	0	0	1	1	1	0	Putative	zinc	finger	motif,	C2HC5-type
HypA	PF01155.19	gi|288560623|ref|YP_003424109.1|	-	0.022	14.7	0.1	0.031	14.3	0.1	1.4	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
SRP1_TIP1	PF00660.17	gi|288560623|ref|YP_003424109.1|	-	0.06	13.4	0.0	1.4	9.1	0.0	2.1	1	1	1	2	2	2	0	Seripauperin	and	TIP1	family
Nudix_N_2	PF14803.6	gi|288560623|ref|YP_003424109.1|	-	0.068	13.1	2.1	0.15	12.0	0.1	2.2	2	0	0	2	2	2	0	Nudix	N-terminal
zf-NADH-PPase	PF09297.11	gi|288560623|ref|YP_003424109.1|	-	0.12	12.1	2.7	0.21	11.3	0.0	2.5	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
CBAH	PF02275.18	gi|288560624|ref|YP_003424110.1|	-	1.6e-103	346.7	1.4	1.8e-103	346.5	1.4	1.0	1	0	0	1	1	1	1	Linear	amide	C-N	hydrolases,	choloylglycine	hydrolase	family
AAT	PF03417.16	gi|288560624|ref|YP_003424110.1|	-	0.0032	17.2	0.1	0.0099	15.6	0.0	1.7	2	0	0	2	2	2	1	Acyl-coenzyme	A:6-aminopenicillanic	acid	acyl-transferase
FMN_red	PF03358.15	gi|288560625|ref|YP_003424111.1|	-	5.6e-21	74.9	0.0	7e-21	74.6	0.0	1.1	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.17	gi|288560625|ref|YP_003424111.1|	-	6.3e-12	45.6	0.0	6.8e-12	45.5	0.0	1.1	1	0	0	1	1	1	1	Flavodoxin-like	fold
MIP	PF00230.20	gi|288560626|ref|YP_003424112.1|	-	1.5e-53	181.9	20.7	1.6e-53	181.7	20.7	1.0	1	0	0	1	1	1	1	Major	intrinsic	protein
NADH_dh_m_C1	PF15088.6	gi|288560626|ref|YP_003424112.1|	-	0.33	10.6	1.2	0.52	10.0	0.1	1.9	2	0	0	2	2	2	0	NADH	dehydrogenase	[ubiquinone]	1	subunit	C1,	mitochondrial
DUF2193	PF09959.9	gi|288560627|ref|YP_003424113.1|	-	4.6e-264	876.4	4.3	5.2e-264	876.2	4.3	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2193)
UPRTase	PF14681.6	gi|288560628|ref|YP_003424114.1|	-	1.3e-71	240.3	0.0	1.5e-71	240.1	0.0	1.0	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
Pribosyltran	PF00156.27	gi|288560628|ref|YP_003424114.1|	-	6.5e-09	35.5	0.2	1.8e-08	34.1	0.2	1.7	1	1	0	1	1	1	1	Phosphoribosyl	transferase	domain
E7	PF00527.18	gi|288560628|ref|YP_003424114.1|	-	0.05	13.8	0.0	5.3	7.3	0.0	2.2	2	0	0	2	2	2	0	E7	protein,	Early	protein
Xan_ur_permease	PF00860.20	gi|288560629|ref|YP_003424115.1|	-	2e-81	273.7	38.7	2.6e-81	273.3	38.7	1.1	1	0	0	1	1	1	1	Permease	family
Acetyltransf_1	PF00583.25	gi|288560630|ref|YP_003424116.1|	-	6.7e-18	65.0	0.1	8e-18	64.8	0.1	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.7	gi|288560630|ref|YP_003424116.1|	-	8.9e-12	45.1	0.0	1.1e-11	44.8	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.7	gi|288560630|ref|YP_003424116.1|	-	2.6e-11	43.8	0.0	4.2e-11	43.1	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.7	gi|288560630|ref|YP_003424116.1|	-	1.2e-07	32.5	0.0	1.5e-07	32.2	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.10	gi|288560630|ref|YP_003424116.1|	-	4.3e-07	29.8	0.0	9.3e-07	28.7	0.0	1.5	2	0	0	2	2	2	1	FR47-like	protein
Acetyltransf_CG	PF14542.6	gi|288560630|ref|YP_003424116.1|	-	0.00013	22.1	0.0	0.00024	21.1	0.0	1.5	1	0	0	1	1	1	1	GCN5-related	N-acetyl-transferase
Acetyltransf_9	PF13527.7	gi|288560630|ref|YP_003424116.1|	-	0.0095	16.0	0.0	0.017	15.2	0.0	1.4	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_15	PF17013.5	gi|288560630|ref|YP_003424116.1|	-	0.01	15.3	0.0	0.01	15.3	0.0	1.2	1	0	0	1	1	1	0	Putative	acetyl-transferase
Acetyltransf_6	PF13480.7	gi|288560630|ref|YP_003424116.1|	-	0.02	15.0	0.0	0.032	14.4	0.0	1.5	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.7	gi|288560630|ref|YP_003424116.1|	-	0.028	14.6	0.1	0.037	14.2	0.1	1.1	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
PMT_2	PF13231.6	gi|288560631|ref|YP_003424117.1|	-	1.2e-16	61.3	12.0	1.2e-16	61.3	12.0	4.3	4	1	1	5	5	5	2	Dolichyl-phosphate-mannose-protein	mannosyltransferase
Sigma_reg_N	PF13800.6	gi|288560631|ref|YP_003424117.1|	-	0.01	16.1	0.1	0.01	16.1	0.1	5.8	6	1	1	7	7	7	0	Sigma	factor	regulator	N-terminal
DUF11	PF01345.18	gi|288560632|ref|YP_003424118.1|	-	5.9e-15	55.3	0.0	9.6e-15	54.7	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF11
bMG10	PF17973.1	gi|288560632|ref|YP_003424118.1|	-	0.05	13.8	0.0	0.093	12.9	0.0	1.5	1	0	0	1	1	1	0	Bacterial	Alpha-2-macroglobulin	MG10	domain
ZirS_C	PF16583.5	gi|288560632|ref|YP_003424118.1|	-	0.14	11.7	2.7	1.3	8.6	0.5	2.4	2	1	0	2	2	2	0	Zinc-regulated	secreted	antivirulence	protein	C-terminal	domain
Pyr_redox_2	PF07992.14	gi|288560633|ref|YP_003424119.1|	-	1.2e-46	159.3	0.1	1.4e-45	155.8	0.1	2.1	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|288560633|ref|YP_003424119.1|	-	9.1e-16	58.2	0.4	1.6e-14	54.2	0.2	2.5	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.22	gi|288560633|ref|YP_003424119.1|	-	1.6e-14	54.1	0.6	1.9e-13	50.7	0.0	2.6	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox_3	PF13738.6	gi|288560633|ref|YP_003424119.1|	-	3.6e-12	46.2	0.6	2e-09	37.1	0.0	3.1	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.24	gi|288560633|ref|YP_003424119.1|	-	5.3e-05	22.5	6.7	0.14	11.3	0.1	3.3	4	0	0	4	4	4	2	FAD	binding	domain
NAD_binding_8	PF13450.6	gi|288560633|ref|YP_003424119.1|	-	6.6e-05	23.1	2.0	0.22	11.8	0.1	2.8	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.17	gi|288560633|ref|YP_003424119.1|	-	0.00011	21.5	0.0	0.0044	16.3	0.0	2.4	2	0	0	2	2	2	1	Thi4	family
FAD_binding_3	PF01494.19	gi|288560633|ref|YP_003424119.1|	-	0.00037	19.9	0.0	0.48	9.6	0.0	2.8	3	0	0	3	3	3	2	FAD	binding	domain
K_oxygenase	PF13434.6	gi|288560633|ref|YP_003424119.1|	-	0.00079	18.7	0.0	0.0027	16.9	0.0	1.8	1	1	1	2	2	2	1	L-lysine	6-monooxygenase	(NADPH-requiring)
GIDA	PF01134.22	gi|288560633|ref|YP_003424119.1|	-	0.0021	17.2	0.0	1.9	7.5	0.0	2.8	3	0	0	3	3	3	2	Glucose	inhibited	division	protein	A
NAD_binding_7	PF13241.6	gi|288560633|ref|YP_003424119.1|	-	0.07	13.6	0.0	0.79	10.2	0.0	2.4	2	0	0	2	2	2	0	Putative	NAD(P)-binding
HI0933_like	PF03486.14	gi|288560633|ref|YP_003424119.1|	-	0.43	9.2	2.5	22	3.6	0.4	3.5	4	0	0	4	4	4	0	HI0933-like	protein
Glycos_transf_1	PF00534.20	gi|288560634|ref|YP_003424120.1|	-	4e-17	62.3	0.3	2e-16	60.0	0.1	2.1	1	1	1	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|288560634|ref|YP_003424120.1|	-	5.7e-13	49.5	0.0	1.1e-12	48.5	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|288560634|ref|YP_003424120.1|	-	3e-10	40.4	0.0	4.6e-10	39.8	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_1_2	PF13524.6	gi|288560634|ref|YP_003424120.1|	-	6.6e-06	26.4	0.0	1.4e-05	25.4	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.6	gi|288560634|ref|YP_003424120.1|	-	0.0018	18.7	0.0	0.0031	18.0	0.0	1.3	1	1	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_4_2	PF13477.6	gi|288560634|ref|YP_003424120.1|	-	0.0022	18.0	1.3	0.0079	16.2	1.3	1.9	1	1	0	1	1	1	1	Glycosyl	transferase	4-like
Lysine_decarbox	PF03641.14	gi|288560635|ref|YP_003424121.1|	-	2.2e-32	111.9	0.1	2.7e-32	111.6	0.1	1.1	1	0	0	1	1	1	1	Possible	lysine	decarboxylase
LDcluster4	PF18306.1	gi|288560635|ref|YP_003424121.1|	-	8e-25	87.3	0.1	1.1e-24	86.8	0.1	1.3	1	1	0	1	1	1	1	SLOG	cluster4	family
DAGK_cat	PF00781.24	gi|288560635|ref|YP_003424121.1|	-	0.022	14.4	0.1	4.8	6.8	0.2	2.2	2	0	0	2	2	2	0	Diacylglycerol	kinase	catalytic	domain
Abhydrolase_1	PF00561.20	gi|288560635|ref|YP_003424121.1|	-	0.22	11.1	0.0	0.33	10.5	0.0	1.3	1	0	0	1	1	1	0	alpha/beta	hydrolase	fold
HTH_45	PF14947.6	gi|288560636|ref|YP_003424122.1|	-	0.038	14.0	0.3	0.1	12.6	0.1	1.9	2	0	0	2	2	2	0	Winged	helix-turn-helix
HTH_27	PF13463.6	gi|288560636|ref|YP_003424122.1|	-	0.052	14.0	0.1	0.3	11.6	0.0	2.1	2	1	0	2	2	2	0	Winged	helix	DNA-binding	domain
CMD	PF02627.20	gi|288560637|ref|YP_003424123.1|	-	1.6e-07	31.3	0.0	1.9e-07	31.0	0.0	1.1	1	0	0	1	1	1	1	Carboxymuconolactone	decarboxylase	family
DUF4756	PF15948.5	gi|288560637|ref|YP_003424123.1|	-	0.026	14.4	0.1	0.033	14.0	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4756)
DUF4208	PF13907.6	gi|288560637|ref|YP_003424123.1|	-	0.087	13.3	0.9	3.4	8.1	0.1	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4208)
CMD	PF02627.20	gi|288560638|ref|YP_003424124.1|	-	2.4e-10	40.3	0.0	3e-10	40.0	0.0	1.1	1	0	0	1	1	1	1	Carboxymuconolactone	decarboxylase	family
Hemagglutinin	PF00509.18	gi|288560638|ref|YP_003424124.1|	-	0.11	10.9	0.1	0.12	10.8	0.1	1.0	1	0	0	1	1	1	0	Haemagglutinin
SNase	PF00565.17	gi|288560639|ref|YP_003424125.1|	-	8.8e-15	55.1	0.0	1.6e-14	54.3	0.0	1.4	1	0	0	1	1	1	1	Staphylococcal	nuclease	homologue
Ada_Zn_binding	PF02805.16	gi|288560639|ref|YP_003424125.1|	-	0.0012	18.9	0.2	0.0021	18.1	0.2	1.4	1	0	0	1	1	1	1	Metal	binding	domain	of	Ada
DUF3795	PF12675.7	gi|288560640|ref|YP_003424126.1|	-	1.2e-09	38.4	23.5	2e-09	37.8	16.5	3.1	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF3795)
zf-ribbon_3	PF13248.6	gi|288560640|ref|YP_003424126.1|	-	0.00023	20.5	2.3	0.00023	20.5	2.3	2.8	3	0	0	3	3	3	1	zinc-ribbon	domain
DZR	PF12773.7	gi|288560640|ref|YP_003424126.1|	-	0.00098	19.1	1.9	0.00098	19.1	1.9	2.6	2	1	0	2	2	2	1	Double	zinc	ribbon
UPF0547	PF10571.9	gi|288560640|ref|YP_003424126.1|	-	0.015	15.4	2.5	0.015	15.4	2.5	3.5	4	1	1	5	5	5	0	Uncharacterised	protein	family	UPF0547
DUF2634	PF10934.8	gi|288560640|ref|YP_003424126.1|	-	0.019	15.1	0.4	0.027	14.6	0.4	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2634)
DUF2752	PF10825.8	gi|288560640|ref|YP_003424126.1|	-	0.21	11.7	2.0	3.6	7.7	0.0	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2752)
Nicastrin	PF05450.15	gi|288560640|ref|YP_003424126.1|	-	0.21	11.0	0.0	0.27	10.7	0.0	1.1	1	0	0	1	1	1	0	Nicastrin
zinc_ribbon_2	PF13240.6	gi|288560640|ref|YP_003424126.1|	-	1.6	8.6	11.0	4.9	7.0	2.1	4.0	3	1	0	3	3	3	0	zinc-ribbon	domain
zf-MYND	PF01753.18	gi|288560640|ref|YP_003424126.1|	-	9.7	6.4	16.4	21	5.3	9.0	3.2	2	1	0	2	2	2	0	MYND	finger
zinc_ribbon_2	PF13240.6	gi|288560641|ref|YP_003424127.1|	-	0.00057	19.5	2.0	0.0011	18.6	2.0	1.5	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|288560641|ref|YP_003424127.1|	-	0.0015	17.9	1.0	0.0023	17.3	1.0	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|288560641|ref|YP_003424127.1|	-	0.0015	18.5	0.1	0.0024	17.9	0.1	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
DUF1129	PF06570.11	gi|288560641|ref|YP_003424127.1|	-	0.024	14.1	1.1	0.044	13.3	1.0	1.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1129)
zinc_ribbon_15	PF17032.5	gi|288560641|ref|YP_003424127.1|	-	0.12	13.2	0.4	0.37	11.6	0.8	1.6	2	0	0	2	2	2	0	zinc-ribbon	family
RseC_MucC	PF04246.12	gi|288560641|ref|YP_003424127.1|	-	0.12	12.3	0.3	0.19	11.6	0.3	1.3	1	0	0	1	1	1	0	Positive	regulator	of	sigma(E),	RseC/MucC
DUF4187	PF13821.6	gi|288560641|ref|YP_003424127.1|	-	0.25	11.2	2.2	0.47	10.3	1.1	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4187)
UPF0547	PF10571.9	gi|288560641|ref|YP_003424127.1|	-	0.66	10.1	4.2	8.3	6.6	0.4	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
CarboxypepD_reg	PF13620.6	gi|288560642|ref|YP_003424128.1|	-	3.4e-09	36.8	0.9	0.0079	16.4	0.0	3.6	3	0	0	3	3	3	2	Carboxypeptidase	regulatory-like	domain
bMG3	PF11974.8	gi|288560642|ref|YP_003424128.1|	-	2.2e-06	27.6	0.1	0.0063	16.5	0.0	2.7	2	1	1	3	3	3	2	Bacterial	alpha-2-macroglobulin	MG3	domain
Big_3_5	PF16640.5	gi|288560642|ref|YP_003424128.1|	-	1.5e-05	25.1	6.8	0.19	11.9	0.3	3.6	3	0	0	3	3	3	2	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|288560642|ref|YP_003424128.1|	-	1.8e-05	24.6	4.6	0.0029	17.6	0.0	4.6	4	1	1	5	5	5	1	Bacterial	Ig-like	domain	(group	1)
MG2	PF01835.19	gi|288560642|ref|YP_003424128.1|	-	0.00018	21.9	0.7	2.7	8.5	0.0	3.4	3	0	0	3	3	3	1	MG2	domain
SpaA	PF17802.1	gi|288560642|ref|YP_003424128.1|	-	0.00033	20.9	19.2	0.43	11.0	3.1	3.5	2	1	1	3	3	3	3	Prealbumin-like	fold	domain
Big_6	PF17936.1	gi|288560642|ref|YP_003424128.1|	-	0.0023	18.2	1.5	0.83	10.0	0.0	3.1	3	0	0	3	3	3	2	Bacterial	Ig	domain
FixH	PF05751.11	gi|288560642|ref|YP_003424128.1|	-	0.016	15.3	3.2	0.018	15.1	0.5	2.4	3	0	0	3	3	3	0	FixH
MG4	PF17789.1	gi|288560642|ref|YP_003424128.1|	-	0.61	10.3	8.3	2.4	8.3	0.4	3.8	1	1	2	4	4	4	0	Macroglobulin	domain	MG4
SdrD_B	PF17210.3	gi|288560642|ref|YP_003424128.1|	-	1.1	9.6	18.9	0.11	12.7	1.7	3.7	3	1	1	4	4	4	0	SdrD	B-like	domain
LPD5	PF18799.1	gi|288560642|ref|YP_003424128.1|	-	1.1	9.6	0.0	1.1	9.6	0.0	2.6	2	0	0	2	2	2	0	Large	polyvalent	protein-associated	domain	5
Pilin_GH	PF16734.5	gi|288560642|ref|YP_003424128.1|	-	2.8	8.3	8.8	5.7	7.3	1.5	2.9	2	1	0	2	2	2	0	Type	IV	pilin-like	G	and	H,	putative
Peptidase_C1	PF00112.23	gi|288560643|ref|YP_003424129.1|	-	1.2e-24	87.6	1.0	2.5e-24	86.6	1.0	1.5	1	0	0	1	1	1	1	Papain	family	cysteine	protease
Lectin_like	PF18560.1	gi|288560643|ref|YP_003424129.1|	-	2.2e-15	57.2	1.2	1.2e-14	54.8	1.2	2.4	1	0	0	1	1	1	1	Lectin	like	domain
Big_1	PF02369.16	gi|288560643|ref|YP_003424129.1|	-	1.2e-08	34.9	0.3	0.00053	19.9	0.1	3.0	2	1	1	3	3	3	2	Bacterial	Ig-like	domain	(group	1)
Big_3_5	PF16640.5	gi|288560643|ref|YP_003424129.1|	-	1.4e-06	28.4	0.3	0.0026	17.9	0.0	2.8	2	0	0	2	2	2	2	Bacterial	Ig-like	domain	(group	3)
CarboxypepD_reg	PF13620.6	gi|288560643|ref|YP_003424129.1|	-	3.7e-05	23.9	0.2	0.016	15.5	0.0	3.4	3	0	0	3	3	3	1	Carboxypeptidase	regulatory-like	domain
Invasin_D3	PF09134.10	gi|288560643|ref|YP_003424129.1|	-	0.00093	19.5	0.1	2	8.8	0.0	2.6	2	0	0	2	2	2	2	Invasin,	domain	3
Epimerase	PF01370.21	gi|288560644|ref|YP_003424130.1|	-	1.2e-52	178.8	0.0	2e-52	178.1	0.0	1.3	2	0	0	2	2	2	1	NAD	dependent	epimerase/dehydratase	family
GDP_Man_Dehyd	PF16363.5	gi|288560644|ref|YP_003424130.1|	-	1.1e-48	166.4	0.0	2.1e-48	165.4	0.0	1.5	1	1	0	1	1	1	1	GDP-mannose	4,6	dehydratase
Polysacc_synt_2	PF02719.15	gi|288560644|ref|YP_003424130.1|	-	1.3e-16	60.6	0.0	6.5e-14	51.8	0.0	2.0	2	0	0	2	2	2	2	Polysaccharide	biosynthesis	protein
3Beta_HSD	PF01073.19	gi|288560644|ref|YP_003424130.1|	-	6.9e-16	58.1	0.0	9.5e-16	57.6	0.0	1.1	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
RmlD_sub_bind	PF04321.17	gi|288560644|ref|YP_003424130.1|	-	6.7e-12	45.1	0.0	8.3e-12	44.8	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
NAD_binding_10	PF13460.6	gi|288560644|ref|YP_003424130.1|	-	2e-08	34.4	0.0	2.8e-08	33.9	0.0	1.2	1	0	0	1	1	1	1	NAD(P)H-binding
adh_short	PF00106.25	gi|288560644|ref|YP_003424130.1|	-	9.1e-06	25.3	0.0	6.2e-05	22.5	0.0	2.2	2	0	0	2	2	2	1	short	chain	dehydrogenase
NAD_binding_4	PF07993.12	gi|288560644|ref|YP_003424130.1|	-	1e-05	24.8	0.0	0.00043	19.5	0.0	2.2	1	1	0	1	1	1	1	Male	sterility	protein
KR	PF08659.10	gi|288560644|ref|YP_003424130.1|	-	3.3e-05	23.9	0.0	7.6e-05	22.7	0.0	1.6	1	1	0	1	1	1	1	KR	domain
NmrA	PF05368.13	gi|288560644|ref|YP_003424130.1|	-	6.5e-05	22.6	0.0	0.00012	21.7	0.0	1.5	1	0	0	1	1	1	1	NmrA-like	family
TrkA_N	PF02254.18	gi|288560644|ref|YP_003424130.1|	-	0.0021	18.3	0.0	0.0036	17.5	0.0	1.4	1	0	0	1	1	1	1	TrkA-N	domain
Sacchrp_dh_NADP	PF03435.18	gi|288560644|ref|YP_003424130.1|	-	0.047	14.0	0.0	0.12	12.6	0.0	1.6	2	0	0	2	2	2	0	Saccharopine	dehydrogenase	NADP	binding	domain
HisK_sensor	PF18698.1	gi|288560644|ref|YP_003424130.1|	-	0.048	14.0	0.0	0.087	13.2	0.0	1.3	1	0	0	1	1	1	0	Histidine	kinase	sensor	domain
ELFV_dehydrog	PF00208.21	gi|288560644|ref|YP_003424130.1|	-	0.062	13.0	0.0	0.086	12.6	0.0	1.4	1	0	0	1	1	1	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
Methyltransf_24	PF13578.6	gi|288560645|ref|YP_003424131.1|	-	5.1e-17	62.8	0.0	8.7e-17	62.1	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_3	PF01596.17	gi|288560645|ref|YP_003424131.1|	-	1.4e-08	34.1	0.0	2e-08	33.7	0.0	1.2	1	0	0	1	1	1	1	O-methyltransferase
CmcI	PF04989.12	gi|288560645|ref|YP_003424131.1|	-	0.0048	16.6	0.0	0.0069	16.1	0.0	1.4	1	0	0	1	1	1	1	Cephalosporin	hydroxylase
Ribonuclease_3	PF00636.26	gi|288560645|ref|YP_003424131.1|	-	0.059	14.0	0.1	0.12	13.0	0.1	1.7	1	1	0	1	1	1	0	Ribonuclease	III	domain
Herpes_BLRF2	PF05812.12	gi|288560645|ref|YP_003424131.1|	-	0.097	12.8	2.8	0.21	11.7	2.8	1.5	1	0	0	1	1	1	0	Herpesvirus	BLRF2	protein
CBS	PF00571.28	gi|288560646|ref|YP_003424132.1|	-	6e-11	42.6	1.9	1.8e-05	25.1	0.0	2.7	2	0	0	2	2	2	2	CBS	domain
Cas_Cas6	PF01881.16	gi|288560646|ref|YP_003424132.1|	-	0.15	12.6	2.0	0.17	12.4	0.1	2.0	3	0	0	3	3	3	0	CRISPR	associated	protein	Cas6
Gal_mutarotas_3	PF18080.1	gi|288560646|ref|YP_003424132.1|	-	0.2	11.6	3.4	0.45	10.4	3.5	1.6	1	1	0	1	1	1	0	Galactose	mutarotase-like	fold	domain
Fer4	PF00037.27	gi|288560647|ref|YP_003424133.1|	-	5.6e-34	114.6	64.4	1.6e-08	34.0	2.4	6.5	6	0	0	6	6	6	6	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|288560647|ref|YP_003424133.1|	-	2.8e-27	95.0	75.9	2.6e-08	34.3	11.9	4.7	2	1	3	5	5	5	5	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|288560647|ref|YP_003424133.1|	-	1.5e-21	76.3	57.3	3.1e-07	30.4	13.4	5.3	3	2	2	5	5	5	5	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|288560647|ref|YP_003424133.1|	-	1.5e-21	77.1	45.5	3.4e-05	24.7	13.9	6.1	5	1	1	6	6	6	6	4Fe-4S	double	cluster	binding	domain
Fer4_9	PF13187.6	gi|288560647|ref|YP_003424133.1|	-	5.5e-19	68.1	49.0	4.3e-06	26.8	10.1	4.3	4	0	0	4	4	4	4	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|288560647|ref|YP_003424133.1|	-	2.7e-17	62.6	55.2	3.7e-05	23.7	1.2	6.1	4	2	2	6	6	6	6	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|288560647|ref|YP_003424133.1|	-	2.2e-16	58.8	57.7	2e-05	24.4	1.5	6.4	6	0	0	6	6	6	6	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|288560647|ref|YP_003424133.1|	-	8.7e-14	50.9	71.0	1.6e-05	24.7	2.2	6.7	7	0	0	7	7	7	5	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|288560647|ref|YP_003424133.1|	-	1.8e-11	44.4	50.2	7.5e-05	23.2	8.6	5.4	2	1	3	5	5	5	4	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|288560647|ref|YP_003424133.1|	-	1.5e-08	34.9	57.0	0.022	15.2	12.1	5.6	2	2	6	8	8	8	7	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|288560647|ref|YP_003424133.1|	-	8.8e-06	26.4	41.7	0.032	14.9	0.3	6.5	5	1	0	5	5	5	2	4Fe-4S	single	cluster	domain
Fer4_22	PF17179.4	gi|288560647|ref|YP_003424133.1|	-	1.3e-05	25.9	42.3	0.057	14.3	1.3	6.1	5	1	1	6	6	6	3	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|288560647|ref|YP_003424133.1|	-	2e-05	24.7	69.5	0.0053	17.2	3.3	6.4	5	1	0	6	6	6	4	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|288560647|ref|YP_003424133.1|	-	6.7e-05	23.3	58.5	0.057	14.0	1.2	7.2	7	1	1	8	8	8	4	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_3	PF12798.7	gi|288560647|ref|YP_003424133.1|	-	0.0094	16.8	3.9	0.0094	16.8	3.9	6.7	7	0	0	7	7	7	4	4Fe-4S	binding	domain
CutA1	PF03091.15	gi|288560647|ref|YP_003424133.1|	-	0.18	11.7	0.5	0.51	10.2	0.1	1.9	2	0	0	2	2	2	0	CutA1	divalent	ion	tolerance	protein
NapB	PF03892.14	gi|288560647|ref|YP_003424133.1|	-	0.75	9.8	0.1	0.75	9.8	0.1	3.6	3	1	1	4	4	4	0	Nitrate	reductase	cytochrome	c-type	subunit	(NapB)
Fer4_18	PF13746.6	gi|288560647|ref|YP_003424133.1|	-	1.7	8.8	53.1	0.5	10.6	0.7	5.6	1	1	3	5	5	5	0	4Fe-4S	dicluster	domain
PfkB	PF00294.24	gi|288560648|ref|YP_003424134.1|	-	3.8e-41	141.4	0.0	5e-41	141.0	0.0	1.1	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
FTR_C	PF02741.15	gi|288560649|ref|YP_003424135.1|	-	2.1e-52	177.1	0.0	3.4e-52	176.4	0.0	1.3	1	0	0	1	1	1	1	FTR,	proximal	lobe
FTR	PF01913.18	gi|288560649|ref|YP_003424135.1|	-	2.2e-45	154.1	0.0	3.1e-45	153.6	0.0	1.2	1	0	0	1	1	1	1	Formylmethanofuran-tetrahydromethanopterin	formyltransferase
HAD_2	PF13419.6	gi|288560650|ref|YP_003424136.1|	-	0.025	14.6	0.2	0.13	12.4	0.0	2.2	2	0	0	2	2	2	0	Haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.12	gi|288560650|ref|YP_003424136.1|	-	0.026	14.2	1.8	0.051	13.3	0.7	2.0	1	1	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
Fer4	PF00037.27	gi|288560652|ref|YP_003424138.1|	-	6.2e-46	152.5	109.9	3.4e-09	36.1	2.9	11.4	11	1	0	11	11	11	9	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|288560652|ref|YP_003424138.1|	-	2.9e-42	143.0	77.2	2.5e-09	37.6	11.6	8.0	7	1	0	7	7	7	7	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|288560652|ref|YP_003424138.1|	-	1.5e-36	124.3	90.2	1.7e-10	40.8	12.2	7.6	6	2	2	8	8	7	7	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|288560652|ref|YP_003424138.1|	-	2.3e-34	116.0	110.5	1.6e-07	31.1	2.9	10.5	11	0	0	11	11	10	9	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|288560652|ref|YP_003424138.1|	-	3.3e-33	113.6	91.0	8.2e-07	29.0	14.9	8.6	6	4	3	9	9	9	8	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|288560652|ref|YP_003424138.1|	-	7.9e-32	109.2	89.4	1.2e-08	35.0	9.6	6.8	5	2	4	9	9	9	8	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|288560652|ref|YP_003424138.1|	-	2.5e-27	95.6	81.5	0.00041	21.2	0.6	10.5	7	2	5	12	12	12	11	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.7	gi|288560652|ref|YP_003424138.1|	-	1.4e-24	84.6	100.4	6.5e-05	22.8	1.6	11.1	11	0	0	11	11	11	10	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|288560652|ref|YP_003424138.1|	-	2.1e-17	63.3	82.7	0.00031	21.1	5.2	8.6	6	3	1	7	7	7	6	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|288560652|ref|YP_003424138.1|	-	1.7e-11	43.7	105.3	0.0046	17.4	3.5	11.0	11	0	0	11	11	11	8	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|288560652|ref|YP_003424138.1|	-	2.2e-11	44.1	89.7	0.095	13.3	0.3	10.3	4	2	7	11	11	11	7	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|288560652|ref|YP_003424138.1|	-	5.2e-09	36.4	121.6	0.021	15.7	3.8	10.8	11	0	0	11	11	11	8	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|288560652|ref|YP_003424138.1|	-	2.9e-08	34.1	88.0	0.0069	16.9	1.9	11.1	11	0	0	11	11	11	5	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_11	PF13247.6	gi|288560652|ref|YP_003424138.1|	-	8.2e-08	32.3	4.7	8.2e-08	32.3	4.7	5.3	3	2	1	5	5	5	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|288560652|ref|YP_003424138.1|	-	0.0011	19.2	84.4	0.01	16.0	9.2	8.4	3	2	6	9	9	9	5	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|288560652|ref|YP_003424138.1|	-	0.06	14.2	72.0	1.8	9.5	1.0	10.1	8	1	2	10	10	10	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|288560652|ref|YP_003424138.1|	-	0.71	10.7	83.9	2.3	9.0	2.1	10.7	7	3	2	9	9	9	0	4Fe-4S	single	cluster	domain
Fer4	PF00037.27	gi|288560653|ref|YP_003424139.1|	-	3.9e-33	111.9	56.4	2.6e-06	27.0	2.5	6.3	6	0	0	6	6	6	6	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|288560653|ref|YP_003424139.1|	-	2.9e-26	90.4	53.9	3.5e-06	26.8	1.5	6.3	6	0	0	6	6	6	6	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|288560653|ref|YP_003424139.1|	-	3.6e-23	81.9	44.2	4.1e-08	33.7	6.9	4.0	2	2	1	4	4	4	4	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|288560653|ref|YP_003424139.1|	-	4.5e-23	81.1	45.7	2.1e-09	37.3	7.7	5.1	4	1	1	5	5	5	5	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|288560653|ref|YP_003424139.1|	-	3.2e-22	78.4	47.5	8.8e-09	35.4	10.1	4.3	3	2	2	5	5	5	5	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|288560653|ref|YP_003424139.1|	-	2e-21	76.7	36.1	0.0004	21.3	0.1	6.2	5	1	1	6	6	6	6	4Fe-4S	double	cluster	binding	domain
Fer4_9	PF13187.6	gi|288560653|ref|YP_003424139.1|	-	2.8e-21	75.4	46.3	3.2e-07	30.4	11.6	4.4	2	1	1	4	4	4	4	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|288560653|ref|YP_003424139.1|	-	4.2e-21	73.7	53.6	8e-05	22.5	2.2	6.4	6	0	0	6	6	6	6	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|288560653|ref|YP_003424139.1|	-	3.9e-15	56.0	44.6	0.0029	18.0	9.9	5.9	4	2	2	6	6	6	5	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|288560653|ref|YP_003424139.1|	-	3.4e-14	53.1	41.3	0.0084	16.6	11.3	5.7	3	2	4	7	7	7	7	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|288560653|ref|YP_003424139.1|	-	9.5e-14	50.7	56.8	2.3e-05	24.6	1.8	6.3	6	0	0	6	6	6	5	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|288560653|ref|YP_003424139.1|	-	1.5e-06	28.7	51.8	0.0056	17.2	0.3	6.4	5	1	1	6	6	6	4	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_18	PF13746.6	gi|288560653|ref|YP_003424139.1|	-	1e-05	25.7	41.8	0.25	11.6	1.7	5.9	4	2	2	6	6	6	5	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|288560653|ref|YP_003424139.1|	-	0.00056	20.6	40.8	0.078	13.7	0.6	6.8	5	2	0	5	5	5	3	4Fe-4S	single	cluster	domain
Fer4_3	PF12798.7	gi|288560653|ref|YP_003424139.1|	-	0.0016	19.2	66.7	0.031	15.2	4.5	6.3	6	0	0	6	6	6	4	4Fe-4S	binding	domain
Fer4_22	PF17179.4	gi|288560653|ref|YP_003424139.1|	-	0.0039	18.0	46.1	0.032	15.1	0.1	6.2	3	2	4	7	7	7	2	4Fe-4S	dicluster	domain
Complex1_49kDa	PF00346.19	gi|288560654|ref|YP_003424140.1|	-	9.5e-48	162.6	0.1	1.3e-40	139.2	0.0	2.3	1	1	1	2	2	2	2	Respiratory-chain	NADH	dehydrogenase,	49	Kd	subunit
NiFeSe_Hases	PF00374.19	gi|288560654|ref|YP_003424140.1|	-	2.1e-14	53.3	2.7	1.8e-11	43.7	0.0	3.3	2	2	1	3	3	3	2	Nickel-dependent	hydrogenase
Oxidored_q6	PF01058.22	gi|288560655|ref|YP_003424141.1|	-	4.2e-27	94.5	0.0	6.6e-27	93.9	0.0	1.3	1	0	0	1	1	1	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
DUF1959	PF09218.10	gi|288560656|ref|YP_003424142.1|	-	3.8e-50	168.9	2.9	4.3e-50	168.7	2.9	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1959)
DUF3510	PF12022.8	gi|288560656|ref|YP_003424142.1|	-	0.025	15.0	0.5	3.9	7.9	0.0	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3510)
DUF2104	PF09877.9	gi|288560657|ref|YP_003424143.1|	-	7.9e-39	132.0	13.1	9e-39	131.8	13.1	1.0	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2104)
DUF1275	PF06912.11	gi|288560657|ref|YP_003424143.1|	-	0.055	13.4	9.0	0.77	9.6	1.7	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1275)
DUF1206	PF06724.11	gi|288560657|ref|YP_003424143.1|	-	3	8.0	9.9	0.26	11.4	1.9	2.8	2	1	0	2	2	2	0	Domain	of	Unknown	Function	(DUF1206)
NADHdh	PF00146.21	gi|288560659|ref|YP_003424145.1|	-	6.9e-31	107.7	23.0	9.1e-31	107.3	23.0	1.0	1	0	0	1	1	1	1	NADH	dehydrogenase
TMEM208_SND2	PF05620.11	gi|288560660|ref|YP_003424146.1|	-	0.0048	16.7	0.1	0.0053	16.5	0.1	1.0	1	0	0	1	1	1	1	SRP-independent	targeting	protein	2/TMEM208
PRA1	PF03208.19	gi|288560660|ref|YP_003424146.1|	-	0.025	14.2	0.3	0.029	14.0	0.3	1.1	1	0	0	1	1	1	0	PRA1	family	protein
DUF2207	PF09972.9	gi|288560660|ref|YP_003424146.1|	-	0.033	13.0	0.1	0.034	12.9	0.1	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
DUF4181	PF13789.6	gi|288560660|ref|YP_003424146.1|	-	0.037	14.3	1.0	0.037	14.3	1.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4181)
DUF1772	PF08592.11	gi|288560660|ref|YP_003424146.1|	-	0.045	14.1	0.0	0.052	13.9	0.0	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1772)
YiaAB	PF05360.14	gi|288560660|ref|YP_003424146.1|	-	0.84	9.9	5.1	1.9	8.8	5.1	1.6	1	1	0	1	1	1	0	yiaA/B	two	helix	domain
NADHdeh_related	PF10125.9	gi|288560661|ref|YP_003424147.1|	-	2.3e-90	301.8	16.1	2.6e-90	301.6	16.1	1.0	1	0	0	1	1	1	1	NADH	dehydrogenase	I,	subunit	N	related	protein
DUF3667	PF12412.8	gi|288560661|ref|YP_003424147.1|	-	0.062	12.8	0.3	0.22	11.0	0.3	2.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3667)
DHHC	PF01529.20	gi|288560661|ref|YP_003424147.1|	-	0.45	10.6	0.1	0.45	10.6	0.1	2.7	2	1	0	2	2	2	0	DHHC	palmitoyltransferase
PRA1	PF03208.19	gi|288560661|ref|YP_003424147.1|	-	1.2	8.7	11.2	0.019	14.6	2.1	2.3	2	1	0	2	2	2	0	PRA1	family	protein
DUF2105	PF09878.9	gi|288560662|ref|YP_003424148.1|	-	4.5e-86	287.7	18.4	5.2e-86	287.5	18.4	1.0	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2105)
DUF2106	PF09879.9	gi|288560663|ref|YP_003424149.1|	-	5.5e-70	233.8	0.0	6.7e-70	233.5	0.0	1.1	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2106)
FTR1	PF03239.14	gi|288560663|ref|YP_003424149.1|	-	0.084	12.0	0.0	0.12	11.5	0.0	1.2	1	0	0	1	1	1	0	Iron	permease	FTR1	family
YwiC	PF14256.6	gi|288560663|ref|YP_003424149.1|	-	0.12	12.7	0.1	0.24	11.7	0.0	1.5	2	0	0	2	2	2	0	YwiC-like	protein
DUF2107	PF09880.9	gi|288560664|ref|YP_003424150.1|	-	4.8e-33	113.1	5.6	5.5e-33	112.9	5.6	1.0	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2107)
DUF2108	PF09881.9	gi|288560665|ref|YP_003424151.1|	-	5.7e-26	90.3	10.7	7.7e-26	89.9	10.7	1.1	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2108)
DUF4040	PF13244.6	gi|288560665|ref|YP_003424151.1|	-	3.7e-05	23.8	5.4	4.6e-05	23.5	5.4	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4040)
Oxidored_q2	PF00420.24	gi|288560665|ref|YP_003424151.1|	-	0.006	16.2	7.8	0.011	15.3	7.8	1.5	1	1	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
DUF2107	PF09880.9	gi|288560665|ref|YP_003424151.1|	-	0.06	13.5	6.5	0.087	12.9	6.5	1.2	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2107)
DUF2109	PF09882.9	gi|288560666|ref|YP_003424152.1|	-	5e-33	113.0	7.5	6e-33	112.7	7.5	1.0	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2109)
DUF4040	PF13244.6	gi|288560666|ref|YP_003424152.1|	-	0.015	15.4	0.5	0.015	15.4	0.5	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4040)
DUF981	PF06168.11	gi|288560666|ref|YP_003424152.1|	-	0.067	13.1	4.0	0.049	13.6	2.8	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF981)
OAD_beta	PF03977.13	gi|288560666|ref|YP_003424152.1|	-	0.16	10.9	4.9	0.17	10.8	4.9	1.0	1	0	0	1	1	1	0	Na+-transporting	oxaloacetate	decarboxylase	beta	subunit
DUF3270	PF11674.8	gi|288560666|ref|YP_003424152.1|	-	1.5	9.0	7.3	0.96	9.7	5.7	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3270)
NiFe_hyd_3_EhaA	PF17367.2	gi|288560668|ref|YP_003424154.1|	-	2.3e-39	133.4	7.5	2.7e-39	133.2	7.5	1.0	1	0	0	1	1	1	1	NiFe-hydrogenase-type-3	Eha	complex	subunit	A
DUF1286	PF06939.11	gi|288560668|ref|YP_003424154.1|	-	0.75	10.1	4.3	0.5	10.7	0.9	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1286)
DUF2070	PF09843.9	gi|288560668|ref|YP_003424154.1|	-	2.5	6.3	11.4	2.8	6.1	11.4	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
2TM	PF13239.6	gi|288560668|ref|YP_003424154.1|	-	2.8	8.3	6.2	5.1	7.5	6.2	1.6	1	1	0	1	1	1	0	2TM	domain
Epimerase	PF01370.21	gi|288560669|ref|YP_003424155.1|	-	5.4e-58	196.3	0.0	6.6e-58	196.0	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
GDP_Man_Dehyd	PF16363.5	gi|288560669|ref|YP_003424155.1|	-	6.2e-55	186.9	0.0	7.7e-55	186.6	0.0	1.0	1	0	0	1	1	1	1	GDP-mannose	4,6	dehydratase
3Beta_HSD	PF01073.19	gi|288560669|ref|YP_003424155.1|	-	2.8e-24	85.6	0.0	4e-24	85.1	0.0	1.1	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
Polysacc_synt_2	PF02719.15	gi|288560669|ref|YP_003424155.1|	-	9.9e-17	61.0	0.0	7e-16	58.2	0.0	1.9	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_10	PF13460.6	gi|288560669|ref|YP_003424155.1|	-	4.8e-11	42.9	0.0	6.6e-11	42.4	0.0	1.2	1	0	0	1	1	1	1	NAD(P)H-binding
NAD_binding_4	PF07993.12	gi|288560669|ref|YP_003424155.1|	-	8.7e-08	31.6	0.0	0.00048	19.4	0.0	2.4	1	1	1	2	2	2	2	Male	sterility	protein
RmlD_sub_bind	PF04321.17	gi|288560669|ref|YP_003424155.1|	-	8.1e-07	28.4	0.0	1.1e-06	27.9	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
NmrA	PF05368.13	gi|288560669|ref|YP_003424155.1|	-	0.00012	21.8	0.0	0.00018	21.2	0.0	1.5	1	1	0	1	1	1	1	NmrA-like	family
Sacchrp_dh_NADP	PF03435.18	gi|288560669|ref|YP_003424155.1|	-	0.077	13.3	0.1	0.13	12.5	0.1	1.4	1	0	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
DapB_N	PF01113.20	gi|288560669|ref|YP_003424155.1|	-	0.13	12.4	0.0	0.22	11.7	0.0	1.4	1	0	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
KR	PF08659.10	gi|288560669|ref|YP_003424155.1|	-	0.13	12.1	0.0	0.64	9.9	0.0	2.0	2	0	0	2	2	2	0	KR	domain
HMGL-like	PF00682.19	gi|288560670|ref|YP_003424156.1|	-	4.6e-73	246.0	0.2	6.9e-73	245.5	0.2	1.3	1	0	0	1	1	1	1	HMGL-like
LeuA_dimer	PF08502.10	gi|288560670|ref|YP_003424156.1|	-	9.9e-34	116.1	2.5	2.3e-33	114.9	2.5	1.7	1	0	0	1	1	1	1	LeuA	allosteric	(dimerisation)	domain
Glyco_hydro_97	PF10566.9	gi|288560670|ref|YP_003424156.1|	-	0.16	11.2	0.0	0.28	10.4	0.0	1.3	1	0	0	1	1	1	0	Glycoside	hydrolase	97
CGI-121	PF08617.10	gi|288560671|ref|YP_003424157.1|	-	5.6e-09	36.3	0.0	1.1e-08	35.4	0.0	1.4	1	1	0	1	1	1	1	Kinase	binding	protein	CGI-121
Big_3_5	PF16640.5	gi|288560672|ref|YP_003424158.1|	-	1.2e-09	38.2	32.7	0.0014	18.8	6.3	3.3	3	0	0	3	3	3	3	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|288560672|ref|YP_003424158.1|	-	1.3e-08	34.7	23.3	0.00017	21.5	1.9	4.6	3	1	1	4	4	4	3	Bacterial	Ig-like	domain	(group	1)
bMG3	PF11974.8	gi|288560672|ref|YP_003424158.1|	-	2.4e-08	33.9	3.6	0.037	14.1	0.5	4.1	4	0	0	4	4	4	3	Bacterial	alpha-2-macroglobulin	MG3	domain
CarboxypepD_reg	PF13620.6	gi|288560672|ref|YP_003424158.1|	-	2.7e-07	30.8	13.9	0.29	11.4	0.6	4.7	4	1	1	5	5	5	4	Carboxypeptidase	regulatory-like	domain
MG4	PF17789.1	gi|288560672|ref|YP_003424158.1|	-	0.0095	16.1	15.2	0.53	10.5	0.7	3.8	4	0	0	4	4	4	2	Macroglobulin	domain	MG4
Ribosomal_S19	PF00203.21	gi|288560672|ref|YP_003424158.1|	-	0.016	15.1	2.5	3.9	7.4	0.1	3.0	3	0	0	3	3	3	0	Ribosomal	protein	S19
bMG6	PF17962.1	gi|288560672|ref|YP_003424158.1|	-	0.18	12.0	6.1	3.7	7.7	0.3	3.6	3	0	0	3	3	3	0	Bacterial	macroglobulin	domain	6
PKD	PF00801.20	gi|288560672|ref|YP_003424158.1|	-	0.2	11.5	3.2	27	4.7	0.0	3.6	3	0	0	3	3	3	0	PKD	domain
GalKase_gal_bdg	PF10509.9	gi|288560673|ref|YP_003424159.1|	-	0.19	11.3	0.5	0.6	9.7	0.2	1.9	2	0	0	2	2	2	0	Galactokinase	galactose-binding	signature
Chlam_PMP	PF02415.17	gi|288560673|ref|YP_003424159.1|	-	2.4	8.8	53.2	0.33	11.5	0.2	9.7	11	1	0	11	11	11	0	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
DegT_DnrJ_EryC1	PF01041.17	gi|288560674|ref|YP_003424160.1|	-	1.3e-07	31.2	0.1	3e-07	30.1	0.1	1.5	1	1	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Nre_N	PF04894.12	gi|288560675|ref|YP_003424161.1|	-	1.3e-80	271.1	0.1	1.8e-80	270.6	0.1	1.1	1	0	0	1	1	1	1	Archaeal	Nre,	N-terminal
Nre_C	PF04895.12	gi|288560675|ref|YP_003424161.1|	-	2.3e-33	114.4	0.0	4.3e-33	113.5	0.0	1.5	1	0	0	1	1	1	1	Archaeal	Nre,	C-terminal
GMP_synt_C	PF00958.22	gi|288560676|ref|YP_003424162.1|	-	6.5e-34	115.9	0.1	1.2e-33	115.0	0.1	1.5	1	0	0	1	1	1	1	GMP	synthase	C	terminal	domain
NAD_synthase	PF02540.17	gi|288560676|ref|YP_003424162.1|	-	5.6e-10	38.8	0.1	1.6e-06	27.4	0.0	2.3	2	0	0	2	2	2	2	NAD	synthase
ATP_bind_3	PF01171.20	gi|288560676|ref|YP_003424162.1|	-	5.7e-05	23.0	0.0	8.4e-05	22.4	0.0	1.3	1	0	0	1	1	1	1	PP-loop	family
QueC	PF06508.13	gi|288560676|ref|YP_003424162.1|	-	0.00047	19.7	0.1	0.013	15.0	0.1	2.2	1	1	1	2	2	2	1	Queuosine	biosynthesis	protein	QueC
tRNA_Me_trans	PF03054.16	gi|288560676|ref|YP_003424162.1|	-	0.00092	18.1	0.0	0.0033	16.3	0.0	1.8	2	0	0	2	2	2	1	tRNA	methyl	transferase
Arginosuc_synth	PF00764.19	gi|288560676|ref|YP_003424162.1|	-	0.0036	16.6	0.1	0.0056	16.0	0.1	1.3	1	0	0	1	1	1	1	Arginosuccinate	synthase
ExbD	PF02472.16	gi|288560677|ref|YP_003424163.1|	-	0.044	14.0	0.1	0.053	13.7	0.1	1.2	1	0	0	1	1	1	0	Biopolymer	transport	protein	ExbD/TolR
Type_ISP_C	PF18135.1	gi|288560677|ref|YP_003424163.1|	-	0.086	11.8	0.0	0.091	11.8	0.0	1.1	1	0	0	1	1	1	0	Type	ISP	C-terminal	specificity	domain
GATase	PF00117.28	gi|288560678|ref|YP_003424164.1|	-	2.5e-39	135.0	0.2	3.1e-39	134.7	0.2	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.13	gi|288560678|ref|YP_003424164.1|	-	9.1e-15	55.0	0.1	2.2e-14	53.8	0.1	1.6	1	1	0	1	1	1	1	Peptidase	C26
FixQ	PF05545.11	gi|288560679|ref|YP_003424165.1|	-	0.00077	19.4	1.0	0.00077	19.4	1.0	1.7	2	0	0	2	2	2	1	Cbb3-type	cytochrome	oxidase	component	FixQ
TB2_DP1_HVA22	PF03134.19	gi|288560679|ref|YP_003424165.1|	-	0.085	12.8	3.8	0.083	12.8	3.8	1.0	1	0	0	1	1	1	0	TB2/DP1,	HVA22	family
DUF2207	PF09972.9	gi|288560679|ref|YP_003424165.1|	-	3.5	6.3	5.5	3.7	6.2	5.5	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
MG4	PF17789.1	gi|288560680|ref|YP_003424166.1|	-	2.4e-12	46.8	1.0	1.9e-05	24.7	0.0	2.8	2	0	0	2	2	2	2	Macroglobulin	domain	MG4
Big_1	PF02369.16	gi|288560680|ref|YP_003424166.1|	-	1.2e-08	34.8	0.7	0.00012	22.0	0.2	2.8	2	0	0	2	2	2	2	Bacterial	Ig-like	domain	(group	1)
Big_3_5	PF16640.5	gi|288560680|ref|YP_003424166.1|	-	5.3e-07	29.7	0.0	0.052	13.7	0.0	2.5	2	0	0	2	2	2	2	Bacterial	Ig-like	domain	(group	3)
Invasin_D3	PF09134.10	gi|288560680|ref|YP_003424166.1|	-	0.001	19.3	0.9	0.075	13.3	0.0	2.7	2	0	0	2	2	2	1	Invasin,	domain	3
Pyr_redox_2	PF07992.14	gi|288560681|ref|YP_003424167.1|	-	1.6e-51	175.3	0.7	1.9e-51	175.1	0.7	1.0	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|288560681|ref|YP_003424167.1|	-	9.3e-26	90.8	2.7	1.1e-19	70.8	0.1	2.5	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|288560681|ref|YP_003424167.1|	-	2.7e-19	69.5	6.0	4.1e-17	62.5	0.4	3.3	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_oxidored	PF12831.7	gi|288560681|ref|YP_003424167.1|	-	2.7e-08	33.6	0.6	2.6e-06	27.0	0.0	2.8	2	1	1	3	3	3	1	FAD	dependent	oxidoreductase
Thi4	PF01946.17	gi|288560681|ref|YP_003424167.1|	-	2e-07	30.5	0.3	3.5e-06	26.5	0.1	2.7	3	0	0	3	3	3	1	Thi4	family
FAD_binding_2	PF00890.24	gi|288560681|ref|YP_003424167.1|	-	2.3e-07	30.2	4.9	0.00046	19.4	0.6	3.8	3	1	1	4	4	4	2	FAD	binding	domain
GIDA	PF01134.22	gi|288560681|ref|YP_003424167.1|	-	7.1e-07	28.7	9.0	0.035	13.2	1.0	4.4	3	2	2	5	5	5	3	Glucose	inhibited	division	protein	A
DAO	PF01266.24	gi|288560681|ref|YP_003424167.1|	-	3.9e-06	26.7	4.1	0.011	15.4	1.3	3.5	3	1	1	4	4	4	2	FAD	dependent	oxidoreductase
FAD_binding_3	PF01494.19	gi|288560681|ref|YP_003424167.1|	-	4.5e-06	26.2	0.6	0.016	14.5	0.0	3.5	3	1	1	4	4	4	2	FAD	binding	domain
HI0933_like	PF03486.14	gi|288560681|ref|YP_003424167.1|	-	7e-06	25.0	6.2	0.00032	19.5	0.3	3.4	3	1	1	4	4	4	2	HI0933-like	protein
K_oxygenase	PF13434.6	gi|288560681|ref|YP_003424167.1|	-	2.6e-05	23.5	2.4	0.7	9.0	0.0	4.0	2	1	1	4	4	4	1	L-lysine	6-monooxygenase	(NADPH-requiring)
NAD_binding_7	PF13241.6	gi|288560681|ref|YP_003424167.1|	-	6e-05	23.4	0.3	0.0006	20.2	0.0	2.5	2	1	0	2	2	2	1	Putative	NAD(P)-binding
NAD_binding_8	PF13450.6	gi|288560681|ref|YP_003424167.1|	-	0.00012	22.2	0.2	0.0031	17.7	0.1	2.4	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Staph_opine_DH	PF10100.9	gi|288560681|ref|YP_003424167.1|	-	0.032	12.9	0.0	0.062	11.9	0.0	1.4	1	0	0	1	1	1	0	Staphylopine	dehydrogenase
PALP	PF00291.25	gi|288560681|ref|YP_003424167.1|	-	0.044	13.2	0.3	2.5	7.5	0.1	2.3	2	0	0	2	2	2	0	Pyridoxal-phosphate	dependent	enzyme
AlaDh_PNT_C	PF01262.21	gi|288560681|ref|YP_003424167.1|	-	0.053	12.8	0.5	7.6	5.8	0.0	2.4	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
Shikimate_DH	PF01488.20	gi|288560681|ref|YP_003424167.1|	-	0.17	11.9	0.8	1.8	8.6	0.1	2.4	2	0	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
CorC_HlyC	PF03471.17	gi|288560681|ref|YP_003424167.1|	-	0.19	11.7	0.9	13	5.9	0.1	2.4	2	0	0	2	2	2	0	Transporter	associated	domain
GatB_N	PF02934.15	gi|288560682|ref|YP_003424168.1|	-	1.6e-65	221.3	0.0	2.6e-65	220.5	0.0	1.4	1	0	0	1	1	1	1	GatB/GatE	catalytic	domain
GatB_Yqey	PF02637.18	gi|288560682|ref|YP_003424168.1|	-	3.3e-24	85.5	3.5	3.3e-24	85.5	3.5	2.2	3	0	0	3	3	3	1	GatB	domain
GAD	PF02938.14	gi|288560682|ref|YP_003424168.1|	-	1.2e-14	54.3	0.1	7.2e-14	51.8	0.0	2.3	2	0	0	2	2	2	1	GAD	domain
YqeY	PF09424.10	gi|288560682|ref|YP_003424168.1|	-	1.4e-07	31.6	1.0	5e-07	29.9	1.0	1.9	1	0	0	1	1	1	1	Yqey-like	protein
2-Hacid_dh	PF00389.30	gi|288560682|ref|YP_003424168.1|	-	0.09	12.4	0.1	0.21	11.2	0.1	1.6	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
PolyA_pol_RNAbd	PF12627.7	gi|288560682|ref|YP_003424168.1|	-	0.11	12.3	1.4	0.18	11.6	0.1	2.2	2	0	0	2	2	2	0	Probable	RNA	and	SrmB-	binding	site	of	polymerase	A
NPH3	PF03000.14	gi|288560682|ref|YP_003424168.1|	-	1.1	8.9	6.1	4.7	6.8	1.5	2.4	2	0	0	2	2	2	0	NPH3	family
Asparaginase	PF00710.20	gi|288560683|ref|YP_003424169.1|	-	8.3e-57	191.8	0.1	1.4e-56	191.1	0.1	1.3	1	0	0	1	1	1	1	Asparaginase,	N-terminal
Asparaginase_C	PF17763.1	gi|288560683|ref|YP_003424169.1|	-	7e-35	119.7	0.0	4.6e-34	117.1	0.0	2.1	2	0	0	2	2	2	1	Glutaminase/Asparaginase	C-terminal	domain
GatD_N	PF18195.1	gi|288560683|ref|YP_003424169.1|	-	3.5e-20	71.0	2.2	7.8e-20	69.9	2.2	1.6	1	0	0	1	1	1	1	GatD	N-terminal	domain
Peripla_BP_4	PF13407.6	gi|288560683|ref|YP_003424169.1|	-	0.0068	16.0	0.1	0.22	11.0	0.0	2.8	3	1	0	3	3	3	1	Periplasmic	binding	protein	domain
HSBP1	PF06825.12	gi|288560684|ref|YP_003424170.1|	-	0.014	15.2	0.9	0.028	14.3	0.9	1.5	1	0	0	1	1	1	0	Heat	shock	factor	binding	protein	1
CENP-F_leu_zip	PF10473.9	gi|288560684|ref|YP_003424170.1|	-	0.031	14.3	3.0	0.044	13.8	3.0	1.1	1	0	0	1	1	1	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
TRAF_BIRC3_bd	PF16673.5	gi|288560684|ref|YP_003424170.1|	-	0.038	13.8	0.2	0.068	13.0	0.2	1.3	1	0	0	1	1	1	0	TNF	receptor-associated	factor	BIRC3	binding	domain
BRI3BP	PF14965.6	gi|288560684|ref|YP_003424170.1|	-	0.1	12.1	0.0	0.1	12.1	0.0	2.1	3	0	0	3	3	3	0	Negative	regulator	of	p53/TP53
DUF2070	PF09843.9	gi|288560684|ref|YP_003424170.1|	-	2.5	6.3	20.0	2.4	6.4	19.3	1.3	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
SLATT_4	PF18186.1	gi|288560684|ref|YP_003424170.1|	-	3.9	7.1	5.9	0.53	9.9	0.1	2.5	4	0	0	4	4	4	0	SMODS	and	SLOG-associating	2TM	effector	domain	family	4
Vsr	PF03852.15	gi|288560685|ref|YP_003424171.1|	-	4.6e-34	116.1	0.2	7.3e-34	115.5	0.2	1.3	1	0	0	1	1	1	1	DNA	mismatch	endonuclease	Vsr
MTES_1575	PF18741.1	gi|288560685|ref|YP_003424171.1|	-	0.00047	20.3	0.7	0.00099	19.2	0.7	1.6	1	0	0	1	1	1	1	REase_MTES_1575
DUF559	PF04480.12	gi|288560685|ref|YP_003424171.1|	-	0.066	13.1	0.2	0.11	12.4	0.1	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF559)
NAD_synthase	PF02540.17	gi|288560686|ref|YP_003424172.1|	-	1.2e-42	145.7	0.0	1.5e-42	145.4	0.0	1.0	1	0	0	1	1	1	1	NAD	synthase
POR	PF01558.18	gi|288560687|ref|YP_003424173.1|	-	2.7e-42	144.8	0.0	4.1e-42	144.2	0.0	1.2	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
TPP_enzyme_C	PF02775.21	gi|288560687|ref|YP_003424173.1|	-	1.4e-22	80.1	0.7	2.2e-22	79.5	0.3	1.6	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
POR_N	PF01855.19	gi|288560688|ref|YP_003424174.1|	-	4.2e-52	177.2	0.1	2.1e-51	174.9	0.0	1.8	2	0	0	2	2	2	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
PFOR_II	PF17147.4	gi|288560688|ref|YP_003424174.1|	-	2.3e-26	92.1	0.0	4.5e-26	91.1	0.0	1.5	1	0	0	1	1	1	1	Pyruvate:ferredoxin	oxidoreductase	core	domain	II
Transketolase_C	PF02780.20	gi|288560688|ref|YP_003424174.1|	-	0.00046	20.1	0.0	0.0009	19.1	0.0	1.4	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
IMPDH	PF00478.25	gi|288560688|ref|YP_003424174.1|	-	0.1	11.6	0.0	0.58	9.1	0.0	2.0	2	0	0	2	2	2	0	IMP	dehydrogenase	/	GMP	reductase	domain
Fer4_21	PF14697.6	gi|288560689|ref|YP_003424175.1|	-	1.2e-07	31.8	9.2	1.5e-07	31.4	9.2	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|288560689|ref|YP_003424175.1|	-	5.1e-07	30.2	11.7	6.7e-07	29.8	11.7	1.1	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|288560689|ref|YP_003424175.1|	-	3.8e-06	26.7	11.6	0.0031	17.5	1.9	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|288560689|ref|YP_003424175.1|	-	5.8e-06	26.2	17.7	0.0042	17.1	5.1	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|288560689|ref|YP_003424175.1|	-	4.4e-05	23.6	12.9	0.00015	21.9	13.3	1.6	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|288560689|ref|YP_003424175.1|	-	5.9e-05	22.7	17.9	0.024	14.4	5.0	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|288560689|ref|YP_003424175.1|	-	0.0002	21.6	11.4	0.0012	19.2	1.1	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_22	PF17179.4	gi|288560689|ref|YP_003424175.1|	-	0.00076	20.3	7.7	0.017	15.9	0.3	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|288560689|ref|YP_003424175.1|	-	0.0011	19.0	15.3	0.0057	16.8	1.6	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|288560689|ref|YP_003424175.1|	-	0.0066	17.0	1.0	0.0066	17.0	1.0	2.2	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_16	PF13484.6	gi|288560689|ref|YP_003424175.1|	-	0.032	15.2	15.1	0.49	11.4	2.5	2.1	1	1	2	3	3	3	0	4Fe-4S	double	cluster	binding	domain
Fer4_8	PF13183.6	gi|288560689|ref|YP_003424175.1|	-	0.052	14.0	1.8	0.052	14.0	1.8	2.1	1	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|288560689|ref|YP_003424175.1|	-	0.075	13.6	14.6	3.1	8.4	14.9	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|288560689|ref|YP_003424175.1|	-	0.23	12.5	3.1	0.23	12.5	3.1	2.6	2	1	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|288560689|ref|YP_003424175.1|	-	2	8.6	10.7	2.6	8.3	0.4	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|288560689|ref|YP_003424175.1|	-	2.4	8.9	11.1	1.5	9.6	1.2	2.2	1	1	1	2	2	2	0	4Fe-4S	single	cluster	domain
AMP-binding	PF00501.28	gi|288560690|ref|YP_003424176.1|	-	2.5e-72	243.8	0.0	3.1e-72	243.5	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.6	gi|288560690|ref|YP_003424176.1|	-	1.7e-21	77.0	0.6	3.9e-21	75.8	0.6	1.7	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
Cupin_2	PF07883.11	gi|288560691|ref|YP_003424177.1|	-	9.8e-15	54.0	0.0	2.5e-14	52.7	0.0	1.7	2	0	0	2	2	2	1	Cupin	domain
HTH_19	PF12844.7	gi|288560691|ref|YP_003424177.1|	-	4.5e-11	42.6	0.1	7.7e-11	41.9	0.1	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_31	PF13560.6	gi|288560691|ref|YP_003424177.1|	-	5.5e-06	26.6	0.0	3.4e-05	24.1	0.0	1.9	1	1	1	2	2	2	1	Helix-turn-helix	domain
HTH_3	PF01381.22	gi|288560691|ref|YP_003424177.1|	-	1.5e-05	24.9	0.0	2.3e-05	24.4	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix
AraC_binding	PF02311.19	gi|288560691|ref|YP_003424177.1|	-	0.00034	20.5	0.0	0.00057	19.8	0.0	1.4	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
MannoseP_isomer	PF01050.18	gi|288560691|ref|YP_003424177.1|	-	0.0013	18.6	0.1	0.018	14.9	0.0	2.1	2	0	0	2	2	2	1	Mannose-6-phosphate	isomerase
Cupin_3	PF05899.12	gi|288560691|ref|YP_003424177.1|	-	0.0059	16.3	0.0	0.011	15.4	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF861)
DUF916	PF06030.12	gi|288560692|ref|YP_003424178.1|	-	0.098	12.7	0.0	0.7	10.0	0.0	1.9	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF916)
MacB_PCD	PF12704.7	gi|288560693|ref|YP_003424179.1|	-	2.8e-22	80.1	2.3	2.8e-22	80.1	2.3	2.2	2	1	0	2	2	2	1	MacB-like	periplasmic	core	domain
FtsX	PF02687.21	gi|288560693|ref|YP_003424179.1|	-	4.4e-11	43.1	7.1	4.4e-11	43.1	7.1	3.2	3	0	0	3	3	3	1	FtsX-like	permease	family
DUF2686	PF10887.8	gi|288560693|ref|YP_003424179.1|	-	0.054	12.4	0.0	0.092	11.7	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2686)
ABC_tran	PF00005.27	gi|288560694|ref|YP_003424180.1|	-	5e-34	117.7	0.1	7.9e-34	117.1	0.1	1.3	1	0	0	1	1	1	1	ABC	transporter
SMC_N	PF02463.19	gi|288560694|ref|YP_003424180.1|	-	1.6e-12	47.3	2.2	3.8e-12	46.1	2.2	1.5	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_21	PF13304.6	gi|288560694|ref|YP_003424180.1|	-	3.9e-09	36.7	2.7	0.00025	20.9	0.0	2.1	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_22	PF13401.6	gi|288560694|ref|YP_003424180.1|	-	1.3e-06	28.7	0.1	3.9e-06	27.2	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.6	gi|288560694|ref|YP_003424180.1|	-	3.3e-05	23.6	0.2	8.1e-05	22.3	0.2	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.6	gi|288560694|ref|YP_003424180.1|	-	7.9e-05	22.5	0.1	0.00021	21.1	0.1	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
RsgA_GTPase	PF03193.16	gi|288560694|ref|YP_003424180.1|	-	0.00032	20.7	0.8	0.00082	19.3	0.1	1.9	2	0	0	2	2	2	1	RsgA	GTPase
AAA_16	PF13191.6	gi|288560694|ref|YP_003424180.1|	-	0.0023	18.3	0.1	0.0033	17.8	0.1	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
T2SSE	PF00437.20	gi|288560694|ref|YP_003424180.1|	-	0.0038	16.3	0.6	0.5	9.4	0.0	2.1	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
IstB_IS21	PF01695.17	gi|288560694|ref|YP_003424180.1|	-	0.004	16.9	0.1	0.025	14.3	0.0	2.0	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
AAA_25	PF13481.6	gi|288560694|ref|YP_003424180.1|	-	0.0046	16.5	0.1	0.12	11.9	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
Dynamin_N	PF00350.23	gi|288560694|ref|YP_003424180.1|	-	0.0056	16.8	1.2	0.01	15.9	1.2	1.6	1	1	0	1	1	1	1	Dynamin	family
MMR_HSR1	PF01926.23	gi|288560694|ref|YP_003424180.1|	-	0.0074	16.4	3.1	0.046	13.8	3.1	2.2	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
AAA_23	PF13476.6	gi|288560694|ref|YP_003424180.1|	-	0.0079	16.7	5.4	0.024	15.1	5.4	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_30	PF13604.6	gi|288560694|ref|YP_003424180.1|	-	0.012	15.4	0.0	0.039	13.7	0.0	1.9	1	1	1	2	2	2	0	AAA	domain
AAA	PF00004.29	gi|288560694|ref|YP_003424180.1|	-	0.012	16.0	1.4	0.72	10.3	1.4	2.3	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
NTPase_1	PF03266.15	gi|288560694|ref|YP_003424180.1|	-	0.027	14.4	0.9	6.3	6.7	0.0	2.2	2	0	0	2	2	2	0	NTPase
PhoH	PF02562.16	gi|288560694|ref|YP_003424180.1|	-	0.028	13.8	0.1	0.08	12.4	0.0	1.8	2	0	0	2	2	2	0	PhoH-like	protein
DnaB_C	PF03796.15	gi|288560694|ref|YP_003424180.1|	-	0.038	13.3	1.2	0.13	11.6	0.4	1.9	2	0	0	2	2	2	0	DnaB-like	helicase	C	terminal	domain
ABC_ATPase	PF09818.9	gi|288560694|ref|YP_003424180.1|	-	0.055	12.3	1.2	4.2	6.1	0.1	2.4	2	1	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
AAA_18	PF13238.6	gi|288560694|ref|YP_003424180.1|	-	0.056	14.0	0.7	0.11	13.0	0.7	1.9	1	1	0	1	1	1	0	AAA	domain
Sen15	PF09631.10	gi|288560694|ref|YP_003424180.1|	-	0.056	13.7	0.1	0.097	13.0	0.1	1.4	1	0	0	1	1	1	0	Sen15	protein
AAA_28	PF13521.6	gi|288560694|ref|YP_003424180.1|	-	0.066	13.5	0.0	0.13	12.5	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
NB-ARC	PF00931.22	gi|288560694|ref|YP_003424180.1|	-	0.076	12.2	1.5	0.43	9.7	1.5	2.0	1	1	0	1	1	1	0	NB-ARC	domain
AAA_33	PF13671.6	gi|288560694|ref|YP_003424180.1|	-	0.12	12.6	0.1	0.34	11.1	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
AAA_24	PF13479.6	gi|288560694|ref|YP_003424180.1|	-	0.21	11.3	1.0	0.51	10.0	0.1	2.0	1	1	1	2	2	2	0	AAA	domain
KAP_NTPase	PF07693.14	gi|288560694|ref|YP_003424180.1|	-	2.1	7.5	6.7	7.6	5.7	0.1	2.2	1	1	0	2	2	2	0	KAP	family	P-loop	domain
MatE	PF01554.18	gi|288560695|ref|YP_003424181.1|	-	1.3e-48	164.7	46.8	8.7e-30	103.5	13.9	2.9	3	0	0	3	3	3	2	MatE
Polysacc_synt_C	PF14667.6	gi|288560695|ref|YP_003424181.1|	-	2.4e-06	27.7	22.5	2.4e-06	27.7	22.5	5.3	3	2	1	4	4	4	2	Polysaccharide	biosynthesis	C-terminal	domain
UPF0020	PF01170.18	gi|288560696|ref|YP_003424182.1|	-	3.7e-35	121.4	0.0	1.8e-34	119.2	0.0	1.9	1	1	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
THUMP	PF02926.17	gi|288560696|ref|YP_003424182.1|	-	1.8e-12	47.6	0.4	3.1e-12	46.8	0.4	1.4	1	0	0	1	1	1	1	THUMP	domain
N6_N4_Mtase	PF01555.18	gi|288560696|ref|YP_003424182.1|	-	6.7e-12	45.6	0.0	7.5e-10	38.9	0.0	2.2	2	0	0	2	2	2	1	DNA	methylase
Methyltransf_31	PF13847.6	gi|288560696|ref|YP_003424182.1|	-	3.5e-07	30.1	0.0	6e-07	29.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
AviRa	PF11599.8	gi|288560696|ref|YP_003424182.1|	-	4.7e-05	23.0	0.1	0.036	13.5	0.0	2.3	1	1	1	2	2	2	2	RRNA	methyltransferase	AviRa
Methyltransf_25	PF13649.6	gi|288560696|ref|YP_003424182.1|	-	5.9e-05	23.7	0.0	0.00014	22.5	0.0	1.7	1	0	0	1	1	1	1	Methyltransferase	domain
N6_Mtase	PF02384.16	gi|288560696|ref|YP_003424182.1|	-	0.00013	21.4	0.0	0.00086	18.7	0.0	2.0	1	1	0	1	1	1	1	N-6	DNA	Methylase
Cons_hypoth95	PF03602.15	gi|288560696|ref|YP_003424182.1|	-	0.00038	20.1	0.0	0.00062	19.5	0.0	1.3	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
MTS	PF05175.14	gi|288560696|ref|YP_003424182.1|	-	0.0012	18.4	0.0	0.002	17.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_15	PF09445.10	gi|288560696|ref|YP_003424182.1|	-	0.0016	18.0	0.0	0.0035	16.9	0.0	1.5	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
PrmA	PF06325.13	gi|288560696|ref|YP_003424182.1|	-	0.0022	17.4	0.2	0.0056	16.1	0.1	1.6	2	0	0	2	2	2	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
MethyltransfD12	PF02086.15	gi|288560696|ref|YP_003424182.1|	-	0.056	13.1	2.9	1.4	8.5	0.0	2.9	2	1	0	3	3	3	0	D12	class	N6	adenine-specific	DNA	methyltransferase
FAD_binding_3	PF01494.19	gi|288560697|ref|YP_003424183.1|	-	7.9e-16	58.2	0.0	2.3e-14	53.4	0.0	2.5	1	1	0	1	1	1	1	FAD	binding	domain
Lycopene_cycl	PF05834.12	gi|288560697|ref|YP_003424183.1|	-	1.5e-11	44.0	0.0	2.5e-11	43.2	0.0	1.3	1	1	0	1	1	1	1	Lycopene	cyclase	protein
DAO	PF01266.24	gi|288560697|ref|YP_003424183.1|	-	1.2e-07	31.6	0.1	5.2e-07	29.6	0.2	1.9	3	0	0	3	3	2	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.6	gi|288560697|ref|YP_003424183.1|	-	2.2e-07	31.0	0.0	6.8e-07	29.4	0.0	1.8	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_2	PF07992.14	gi|288560697|ref|YP_003424183.1|	-	1.3e-06	27.8	0.2	2.2e-05	23.8	0.0	2.3	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.17	gi|288560697|ref|YP_003424183.1|	-	1.4e-06	27.7	0.1	4.1e-06	26.2	0.1	1.8	1	1	0	1	1	1	1	Thi4	family
HI0933_like	PF03486.14	gi|288560697|ref|YP_003424183.1|	-	5.7e-06	25.3	0.5	2.1e-05	23.4	0.0	2.0	2	0	0	2	2	2	1	HI0933-like	protein
ApbA	PF02558.16	gi|288560697|ref|YP_003424183.1|	-	1.9e-05	24.3	0.4	0.00044	19.9	0.1	2.5	2	1	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
Pyr_redox	PF00070.27	gi|288560697|ref|YP_003424183.1|	-	5.5e-05	23.7	0.1	0.00029	21.3	0.0	2.4	3	0	0	3	3	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.24	gi|288560697|ref|YP_003424183.1|	-	7.6e-05	22.0	0.1	0.00013	21.2	0.1	1.3	1	0	0	1	1	1	1	FAD	binding	domain
3HCDH_N	PF02737.18	gi|288560697|ref|YP_003424183.1|	-	7.9e-05	22.6	0.0	0.00028	20.8	0.0	1.9	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Pyr_redox_3	PF13738.6	gi|288560697|ref|YP_003424183.1|	-	0.00027	20.3	0.2	0.0013	18.1	0.1	2.1	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.22	gi|288560697|ref|YP_003424183.1|	-	0.00036	19.8	0.1	0.0065	15.6	0.0	2.2	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
FAD_oxidored	PF12831.7	gi|288560697|ref|YP_003424183.1|	-	0.0014	18.0	0.0	0.0024	17.3	0.0	1.4	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
Trp_halogenase	PF04820.14	gi|288560697|ref|YP_003424183.1|	-	0.0068	15.3	0.0	0.98	8.2	0.0	2.8	2	1	0	2	2	2	1	Tryptophan	halogenase
TrkA_N	PF02254.18	gi|288560697|ref|YP_003424183.1|	-	0.0086	16.3	0.0	0.02	15.1	0.0	1.6	1	0	0	1	1	1	1	TrkA-N	domain
F420_oxidored	PF03807.17	gi|288560697|ref|YP_003424183.1|	-	0.024	15.2	0.1	0.13	12.9	0.0	2.0	2	0	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_Gly3P_dh_N	PF01210.23	gi|288560697|ref|YP_003424183.1|	-	0.052	13.5	0.0	0.088	12.8	0.0	1.4	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
NAD_binding_7	PF13241.6	gi|288560697|ref|YP_003424183.1|	-	0.054	13.9	0.0	0.14	12.6	0.0	1.7	1	0	0	1	1	1	0	Putative	NAD(P)-binding
Sacchrp_dh_NADP	PF03435.18	gi|288560697|ref|YP_003424183.1|	-	0.055	13.7	0.1	0.6	10.4	0.0	2.3	2	0	0	2	2	2	0	Saccharopine	dehydrogenase	NADP	binding	domain
UDPG_MGDP_dh_N	PF03721.14	gi|288560697|ref|YP_003424183.1|	-	0.06	12.9	0.1	0.13	11.9	0.1	1.5	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
SE	PF08491.10	gi|288560697|ref|YP_003424183.1|	-	0.061	12.4	0.0	0.11	11.5	0.0	1.4	1	0	0	1	1	1	0	Squalene	epoxidase
NAD_binding_9	PF13454.6	gi|288560697|ref|YP_003424183.1|	-	0.065	13.2	0.1	0.22	11.5	0.0	1.9	2	0	0	2	2	2	0	FAD-NAD(P)-binding
2-Hacid_dh_C	PF02826.19	gi|288560697|ref|YP_003424183.1|	-	0.067	12.5	0.0	0.15	11.4	0.0	1.6	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Ldh_1_N	PF00056.23	gi|288560697|ref|YP_003424183.1|	-	0.074	13.1	0.0	0.14	12.3	0.0	1.5	1	0	0	1	1	1	0	lactate/malate	dehydrogenase,	NAD	binding	domain
ThiF	PF00899.21	gi|288560697|ref|YP_003424183.1|	-	0.1	11.9	0.0	0.19	11.0	0.0	1.4	1	0	0	1	1	1	0	ThiF	family
NAD_binding_2	PF03446.15	gi|288560697|ref|YP_003424183.1|	-	0.11	12.7	0.0	0.23	11.6	0.0	1.6	1	0	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
DUF2408	PF10303.9	gi|288560697|ref|YP_003424183.1|	-	0.19	12.3	1.8	0.43	11.1	1.8	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2408)
bPH_2	PF03703.14	gi|288560698|ref|YP_003424184.1|	-	1.2e-15	57.5	0.0	1.8e-15	56.9	0.0	1.3	1	0	0	1	1	1	1	Bacterial	PH	domain
DUF2701	PF10857.8	gi|288560698|ref|YP_003424184.1|	-	0.11	12.5	5.3	0.27	11.3	5.3	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2701)
PIG-P	PF08510.12	gi|288560698|ref|YP_003424184.1|	-	0.68	9.9	3.4	2	8.4	3.4	1.9	1	1	0	1	1	1	0	PIG-P
ABM	PF03992.16	gi|288560699|ref|YP_003424185.1|	-	9.4e-12	44.9	0.0	1.1e-11	44.6	0.0	1.1	1	0	0	1	1	1	1	Antibiotic	biosynthesis	monooxygenase
F420_oxidored	PF03807.17	gi|288560700|ref|YP_003424186.1|	-	1.9e-14	54.0	0.4	3.5e-14	53.2	0.4	1.5	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
IlvN	PF07991.12	gi|288560700|ref|YP_003424186.1|	-	0.00018	21.1	0.2	0.00036	20.1	0.1	1.6	2	0	0	2	2	2	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
adh_short	PF00106.25	gi|288560700|ref|YP_003424186.1|	-	0.0014	18.1	0.7	0.0052	16.3	0.3	1.9	2	0	0	2	2	2	1	short	chain	dehydrogenase
3HCDH_N	PF02737.18	gi|288560700|ref|YP_003424186.1|	-	0.0042	17.0	0.3	0.007	16.3	0.3	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_Gly3P_dh_N	PF01210.23	gi|288560700|ref|YP_003424186.1|	-	0.017	15.1	0.0	0.031	14.3	0.0	1.4	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
2-Hacid_dh_C	PF02826.19	gi|288560700|ref|YP_003424186.1|	-	0.017	14.5	0.1	0.11	11.8	0.1	2.0	2	0	0	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
KR	PF08659.10	gi|288560700|ref|YP_003424186.1|	-	0.023	14.6	0.1	0.078	12.9	0.1	1.7	2	0	0	2	2	2	0	KR	domain
adh_short_C2	PF13561.6	gi|288560700|ref|YP_003424186.1|	-	0.025	14.1	0.3	0.7	9.4	0.0	2.1	2	0	0	2	2	2	0	Enoyl-(Acyl	carrier	protein)	reductase
NAD_binding_2	PF03446.15	gi|288560700|ref|YP_003424186.1|	-	0.037	14.2	0.2	0.086	13.0	0.0	1.7	3	0	0	3	3	3	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
PDH	PF02153.17	gi|288560700|ref|YP_003424186.1|	-	0.11	11.5	0.1	0.22	10.5	0.1	1.5	1	1	0	1	1	1	0	Prephenate	dehydrogenase
Semialdhyde_dh	PF01118.24	gi|288560700|ref|YP_003424186.1|	-	0.12	12.9	0.2	0.33	11.4	0.1	1.8	2	0	0	2	2	2	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
ADH_N	PF08240.12	gi|288560701|ref|YP_003424187.1|	-	8.6e-15	54.6	0.0	1.7e-14	53.6	0.0	1.5	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.26	gi|288560701|ref|YP_003424187.1|	-	4.6e-14	52.5	0.5	8.7e-14	51.6	0.5	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
AlaDh_PNT_C	PF01262.21	gi|288560701|ref|YP_003424187.1|	-	0.00057	19.3	0.8	0.00095	18.5	0.8	1.4	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
Transport_MerF	PF11431.8	gi|288560701|ref|YP_003424187.1|	-	0.11	12.4	3.7	0.22	11.4	3.7	1.5	1	0	0	1	1	1	0	Membrane	transport	protein	MerF
ADH_zinc_N_2	PF13602.6	gi|288560701|ref|YP_003424187.1|	-	0.12	13.5	0.0	0.23	12.5	0.0	1.5	1	0	0	1	1	1	0	Zinc-binding	dehydrogenase
DUF1724	PF08350.10	gi|288560702|ref|YP_003424188.1|	-	0.0004	20.4	5.4	0.00042	20.4	2.7	2.5	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1724)
HTH_5	PF01022.20	gi|288560702|ref|YP_003424188.1|	-	0.0013	18.5	1.2	0.0023	17.7	1.2	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
tRNA_Me_trans	PF03054.16	gi|288560702|ref|YP_003424188.1|	-	0.081	11.7	0.0	0.11	11.2	0.0	1.1	1	0	0	1	1	1	0	tRNA	methyl	transferase
MarR_2	PF12802.7	gi|288560702|ref|YP_003424188.1|	-	0.15	12.0	0.0	0.25	11.3	0.0	1.3	1	0	0	1	1	1	0	MarR	family
DUF1724	PF08350.10	gi|288560703|ref|YP_003424189.1|	-	9.4e-14	51.3	0.6	2e-12	47.0	0.0	2.6	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1724)
HTH_34	PF13601.6	gi|288560703|ref|YP_003424189.1|	-	0.0075	16.4	0.8	0.039	14.1	0.2	2.1	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_5	PF01022.20	gi|288560703|ref|YP_003424189.1|	-	0.029	14.2	0.2	0.089	12.7	0.1	1.9	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.6	gi|288560703|ref|YP_003424189.1|	-	0.043	13.4	0.2	0.082	12.5	0.2	1.5	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.19	gi|288560703|ref|YP_003424189.1|	-	0.059	13.3	0.1	0.1	12.5	0.1	1.4	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
AAA	PF00004.29	gi|288560704|ref|YP_003424190.1|	-	7.3e-45	152.6	0.0	2.3e-44	151.0	0.0	1.9	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_lid_3	PF17862.1	gi|288560704|ref|YP_003424190.1|	-	6.2e-14	51.5	0.6	1.3e-13	50.5	0.6	1.5	1	0	0	1	1	1	1	AAA+	lid	domain
Prot_ATP_ID_OB	PF16450.5	gi|288560704|ref|YP_003424190.1|	-	1.6e-11	44.0	0.0	4e-11	42.7	0.0	1.7	1	0	0	1	1	1	1	Proteasomal	ATPase	OB	C-terminal	domain
AAA_2	PF07724.14	gi|288560704|ref|YP_003424190.1|	-	4.4e-08	33.4	0.1	1.7e-07	31.5	0.0	2.0	2	0	0	2	2	2	1	AAA	domain	(Cdc48	subfamily)
AAA_16	PF13191.6	gi|288560704|ref|YP_003424190.1|	-	3.6e-06	27.5	0.1	0.00051	20.5	0.0	2.4	1	1	1	2	2	2	1	AAA	ATPase	domain
AAA_5	PF07728.14	gi|288560704|ref|YP_003424190.1|	-	4.6e-06	26.7	0.5	8.3e-05	22.6	0.1	2.9	2	1	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
RuvB_N	PF05496.12	gi|288560704|ref|YP_003424190.1|	-	8.5e-06	25.6	0.0	2.5e-05	24.1	0.0	1.8	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_22	PF13401.6	gi|288560704|ref|YP_003424190.1|	-	2.5e-05	24.6	0.3	0.00089	19.5	0.3	2.5	1	1	0	1	1	1	1	AAA	domain
DUF815	PF05673.13	gi|288560704|ref|YP_003424190.1|	-	0.00013	21.3	0.0	0.00021	20.5	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
AAA_28	PF13521.6	gi|288560704|ref|YP_003424190.1|	-	0.00049	20.4	0.0	0.0009	19.5	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.6	gi|288560704|ref|YP_003424190.1|	-	0.00054	20.5	0.2	0.0016	19.0	0.0	1.9	2	0	0	2	2	1	1	AAA	domain
RNA_helicase	PF00910.22	gi|288560704|ref|YP_003424190.1|	-	0.00073	19.9	0.0	0.0016	18.8	0.0	1.6	1	0	0	1	1	1	1	RNA	helicase
TIP49	PF06068.13	gi|288560704|ref|YP_003424190.1|	-	0.0012	18.1	0.0	0.0026	17.0	0.0	1.5	1	0	0	1	1	1	1	TIP49	P-loop	domain
IstB_IS21	PF01695.17	gi|288560704|ref|YP_003424190.1|	-	0.0024	17.6	0.0	0.0047	16.7	0.0	1.5	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_24	PF13479.6	gi|288560704|ref|YP_003424190.1|	-	0.0038	17.0	0.0	0.0091	15.7	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_14	PF13173.6	gi|288560704|ref|YP_003424190.1|	-	0.0053	16.8	0.0	0.018	15.1	0.0	1.9	2	0	0	2	2	1	1	AAA	domain
AAA_33	PF13671.6	gi|288560704|ref|YP_003424190.1|	-	0.0071	16.5	0.0	0.016	15.4	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
Mg_chelatase	PF01078.21	gi|288560704|ref|YP_003424190.1|	-	0.0078	15.6	0.0	0.014	14.8	0.0	1.4	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
ATPase_2	PF01637.18	gi|288560704|ref|YP_003424190.1|	-	0.012	15.5	2.5	0.1	12.5	0.1	2.9	2	1	1	3	3	3	0	ATPase	domain	predominantly	from	Archaea
AAA_7	PF12775.7	gi|288560704|ref|YP_003424190.1|	-	0.016	14.7	0.0	0.041	13.4	0.0	1.7	1	1	0	1	1	1	0	P-loop	containing	dynein	motor	region
Prot_ATP_OB_N	PF17758.1	gi|288560704|ref|YP_003424190.1|	-	0.02	14.6	0.0	0.059	13.0	0.0	1.8	1	0	0	1	1	1	0	Proteasomal	ATPase	OB	N-terminal	domain
ATPase	PF06745.13	gi|288560704|ref|YP_003424190.1|	-	0.024	14.0	4.3	0.057	12.7	0.1	2.6	2	1	0	2	2	2	0	KaiC
Phage_GP20	PF06810.11	gi|288560704|ref|YP_003424190.1|	-	0.03	14.1	6.3	0.15	11.8	4.1	2.6	2	0	0	2	2	2	0	Phage	minor	structural	protein	GP20
Herpes_BLRF2	PF05812.12	gi|288560704|ref|YP_003424190.1|	-	0.033	14.3	2.9	0.065	13.4	2.9	1.5	1	0	0	1	1	1	0	Herpesvirus	BLRF2	protein
AAA_3	PF07726.11	gi|288560704|ref|YP_003424190.1|	-	0.037	13.9	0.0	0.16	11.9	0.0	2.0	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
TsaE	PF02367.17	gi|288560704|ref|YP_003424190.1|	-	0.04	13.9	0.0	0.078	13.0	0.0	1.4	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
Torsin	PF06309.11	gi|288560704|ref|YP_003424190.1|	-	0.054	13.6	0.0	0.11	12.6	0.0	1.5	1	0	0	1	1	1	0	Torsin
AAA_11	PF13086.6	gi|288560704|ref|YP_003424190.1|	-	0.06	13.1	0.5	0.62	9.8	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
Parvo_NS1	PF01057.17	gi|288560704|ref|YP_003424190.1|	-	0.062	12.4	0.0	0.14	11.2	0.0	1.5	1	0	0	1	1	1	0	Parvovirus	non-structural	protein	NS1
NACHT	PF05729.12	gi|288560704|ref|YP_003424190.1|	-	0.063	13.2	0.1	0.76	9.7	0.0	2.3	1	1	1	2	2	2	0	NACHT	domain
Zeta_toxin	PF06414.12	gi|288560704|ref|YP_003424190.1|	-	0.064	12.5	0.0	0.13	11.6	0.0	1.5	1	0	0	1	1	1	0	Zeta	toxin
Sigma54_activat	PF00158.26	gi|288560704|ref|YP_003424190.1|	-	0.065	12.9	0.0	0.14	11.8	0.0	1.5	1	0	0	1	1	1	0	Sigma-54	interaction	domain
AAA_25	PF13481.6	gi|288560704|ref|YP_003424190.1|	-	0.083	12.5	0.6	0.72	9.4	0.1	2.3	1	1	0	2	2	2	0	AAA	domain
cobW	PF02492.19	gi|288560704|ref|YP_003424190.1|	-	0.12	12.0	0.6	0.23	11.1	0.0	1.8	2	0	0	2	2	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_17	PF13207.6	gi|288560704|ref|YP_003424190.1|	-	0.47	10.9	3.1	0.88	10.0	0.1	2.7	2	1	1	3	3	2	0	AAA	domain
TolA_bind_tri	PF16331.5	gi|288560704|ref|YP_003424190.1|	-	0.47	10.6	5.5	5.6	7.1	0.2	2.9	3	0	0	3	3	3	0	TolA	binding	protein	trimerisation
GreA_GreB_N	PF03449.15	gi|288560704|ref|YP_003424190.1|	-	0.6	10.3	4.7	12	6.1	0.0	3.4	3	0	0	3	3	3	0	Transcription	elongation	factor,	N-terminal
HTH_3	PF01381.22	gi|288560705|ref|YP_003424191.1|	-	2.2e-12	46.9	2.0	3.3e-12	46.3	2.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix
HTH_31	PF13560.6	gi|288560705|ref|YP_003424191.1|	-	3.9e-06	27.1	0.0	6.8e-06	26.3	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_19	PF12844.7	gi|288560705|ref|YP_003424191.1|	-	5.7e-05	23.1	0.9	0.00011	22.1	0.9	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_25	PF13413.6	gi|288560705|ref|YP_003424191.1|	-	0.00054	19.8	0.5	0.0012	18.7	0.4	1.6	1	1	0	1	1	1	1	Helix-turn-helix	domain
zf-FCS	PF06467.14	gi|288560705|ref|YP_003424191.1|	-	0.065	13.2	0.3	0.13	12.3	0.3	1.6	1	0	0	1	1	1	0	MYM-type	Zinc	finger	with	FCS	sequence	motif
DUF4428	PF14471.6	gi|288560705|ref|YP_003424191.1|	-	0.29	11.1	5.3	0.18	11.8	3.1	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4428)
PhnA_Zn_Ribbon	PF08274.12	gi|288560705|ref|YP_003424191.1|	-	3.3	7.7	4.3	28	4.8	0.1	2.2	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
DUF356	PF04009.12	gi|288560706|ref|YP_003424192.1|	-	5.5e-41	139.1	1.4	6.6e-41	138.9	1.4	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF356)
DUF3797	PF12677.7	gi|288560707|ref|YP_003424193.1|	-	0.01	15.7	0.8	0.14	12.0	0.0	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3797)
HypA	PF01155.19	gi|288560707|ref|YP_003424193.1|	-	0.018	15.1	0.1	0.03	14.3	0.1	1.3	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zinc_ribbon_2	PF13240.6	gi|288560707|ref|YP_003424193.1|	-	0.036	13.8	3.7	0.61	9.9	0.2	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
DZR	PF12773.7	gi|288560707|ref|YP_003424193.1|	-	0.072	13.1	0.6	0.14	12.2	0.6	1.4	1	0	0	1	1	1	0	Double	zinc	ribbon
zf-ribbon_3	PF13248.6	gi|288560707|ref|YP_003424193.1|	-	0.65	9.5	5.2	5	6.7	5.2	2.2	1	1	0	1	1	1	0	zinc-ribbon	domain
POTRA_1	PF08478.10	gi|288560708|ref|YP_003424194.1|	-	0.1	12.9	0.2	6.7	7.1	0.0	2.4	2	0	0	2	2	2	0	POTRA	domain,	FtsQ-type
DUF2633	PF11119.8	gi|288560708|ref|YP_003424194.1|	-	0.22	11.5	0.3	0.36	10.8	0.3	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2633)
Radical_SAM	PF04055.21	gi|288560709|ref|YP_003424195.1|	-	4.6e-17	62.9	0.0	2e-16	60.8	0.0	1.9	2	0	0	2	2	2	1	Radical	SAM	superfamily
SPASM	PF13186.6	gi|288560709|ref|YP_003424195.1|	-	2.2e-07	31.3	0.6	7.3e-07	29.6	0.6	1.9	2	0	0	2	2	2	1	Iron-sulfur	cluster-binding	domain
Fer4_12	PF13353.6	gi|288560709|ref|YP_003424195.1|	-	0.00026	21.3	0.1	0.00064	20.0	0.0	1.7	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Eryth_link_C	PF16915.5	gi|288560709|ref|YP_003424195.1|	-	0.00027	20.9	0.1	0.00054	20.0	0.1	1.4	1	0	0	1	1	1	1	Annelid	erythrocruorin	linker	subunit	C-terminus
Fer4_14	PF13394.6	gi|288560709|ref|YP_003424195.1|	-	0.0071	16.5	0.0	0.021	15.0	0.0	1.9	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Lar_restr_allev	PF14354.6	gi|288560710|ref|YP_003424196.1|	-	1.6e-06	28.4	1.5	2.1e-06	28.0	1.5	1.1	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
Zn-ribbon_8	PF09723.10	gi|288560710|ref|YP_003424196.1|	-	0.00017	21.6	2.9	0.3	11.2	0.1	2.2	2	0	0	2	2	2	2	Zinc	ribbon	domain
DUF2387	PF09526.10	gi|288560710|ref|YP_003424196.1|	-	0.00047	20.3	0.6	0.0006	19.9	0.6	1.2	1	0	0	1	1	1	1	Probable	metal-binding	protein	(DUF2387)
zf-ribbon_3	PF13248.6	gi|288560710|ref|YP_003424196.1|	-	0.00051	19.3	2.3	0.051	13.0	0.1	2.2	2	0	0	2	2	2	1	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.11	gi|288560710|ref|YP_003424196.1|	-	0.0021	17.9	2.5	0.0064	16.4	2.5	1.7	1	1	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Zn_Tnp_IS1595	PF12760.7	gi|288560710|ref|YP_003424196.1|	-	0.0023	17.9	0.4	0.0035	17.3	0.4	1.3	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
zinc_ribbon_4	PF13717.6	gi|288560710|ref|YP_003424196.1|	-	0.0029	17.5	0.8	2.5	8.1	0.1	2.3	2	0	0	2	2	2	2	zinc-ribbon	domain
Rubredoxin	PF00301.20	gi|288560710|ref|YP_003424196.1|	-	0.0099	15.9	2.6	0.57	10.3	0.3	2.2	2	0	0	2	2	2	1	Rubredoxin
RNA_POL_M_15KD	PF02150.16	gi|288560710|ref|YP_003424196.1|	-	0.012	15.5	2.4	0.24	11.3	0.1	2.3	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
Rubredoxin_2	PF18073.1	gi|288560710|ref|YP_003424196.1|	-	0.018	14.7	3.4	0.57	10.0	0.5	2.2	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
Prim_Zn_Ribbon	PF08273.12	gi|288560710|ref|YP_003424196.1|	-	0.019	15.2	0.3	1.8	8.9	0.1	2.3	2	0	0	2	2	2	0	Zinc-binding	domain	of	primase-helicase
TFIIS_C	PF01096.18	gi|288560710|ref|YP_003424196.1|	-	0.022	14.6	2.8	1.3	8.9	0.3	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
Endonuclease_7	PF02945.15	gi|288560710|ref|YP_003424196.1|	-	0.023	14.6	0.4	0.026	14.5	0.4	1.1	1	0	0	1	1	1	0	Recombination	endonuclease	VII
DUF35_N	PF12172.8	gi|288560710|ref|YP_003424196.1|	-	0.024	14.5	1.4	1.8	8.5	0.1	2.2	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-ZPR1	PF03367.13	gi|288560710|ref|YP_003424196.1|	-	0.029	14.2	0.2	0.031	14.1	0.2	1.1	1	0	0	1	1	1	0	ZPR1	zinc-finger	domain
zf-Mss51	PF13824.6	gi|288560710|ref|YP_003424196.1|	-	0.03	14.4	4.6	0.44	10.7	5.0	2.0	1	1	0	1	1	1	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
zf-C2H2_3	PF13878.6	gi|288560710|ref|YP_003424196.1|	-	0.031	14.1	2.2	0.4	10.6	0.2	2.3	2	0	0	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
zf-H2C2_2	PF13465.6	gi|288560710|ref|YP_003424196.1|	-	0.039	14.4	3.0	1.1	9.8	0.4	2.3	2	0	0	2	2	2	0	Zinc-finger	double	domain
CpXC	PF14353.6	gi|288560710|ref|YP_003424196.1|	-	0.045	13.8	2.4	0.66	10.0	2.5	2.1	1	1	0	1	1	1	0	CpXC	protein
zf-LITAF-like	PF10601.9	gi|288560710|ref|YP_003424196.1|	-	0.049	13.9	0.2	1.1	9.6	0.0	2.1	2	0	0	2	2	2	0	LITAF-like	zinc	ribbon	domain
Mut7-C	PF01927.16	gi|288560710|ref|YP_003424196.1|	-	0.056	13.5	0.5	0.072	13.2	0.5	1.2	1	0	0	1	1	1	0	Mut7-C	RNAse	domain
Mu-like_Com	PF10122.9	gi|288560710|ref|YP_003424196.1|	-	0.058	12.8	2.1	0.37	10.3	0.2	2.1	1	1	1	2	2	2	0	Mu-like	prophage	protein	Com
TF_Zn_Ribbon	PF08271.12	gi|288560710|ref|YP_003424196.1|	-	0.059	12.9	6.0	0.13	11.8	4.1	2.2	1	1	1	2	2	2	0	TFIIB	zinc-binding
DUF2310	PF10071.9	gi|288560710|ref|YP_003424196.1|	-	0.063	12.5	0.3	0.073	12.3	0.3	1.1	1	0	0	1	1	1	0	Zn-ribbon-containing,	possibly	nucleic-acid-binding	protein	(DUF2310)
zf-RING_7	PF02591.15	gi|288560710|ref|YP_003424196.1|	-	0.069	13.4	0.2	7.3	6.9	0.0	2.3	2	0	0	2	2	2	0	C4-type	zinc	ribbon	domain
Med27	PF11571.8	gi|288560710|ref|YP_003424196.1|	-	0.07	13.5	0.6	0.11	12.9	0.6	1.3	1	1	0	1	1	1	0	Mediator	complex	subunit	27
Terminase_GpA	PF05876.12	gi|288560710|ref|YP_003424196.1|	-	0.12	10.9	0.4	0.13	10.8	0.4	1.0	1	0	0	1	1	1	0	Phage	terminase	large	subunit	(GpA)
DUF1936	PF09151.10	gi|288560710|ref|YP_003424196.1|	-	0.18	11.8	4.4	7.3	6.6	0.1	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1936)
zf-C2H2	PF00096.26	gi|288560710|ref|YP_003424196.1|	-	0.23	12.0	3.9	3.5	8.3	0.5	2.3	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
HypA	PF01155.19	gi|288560710|ref|YP_003424196.1|	-	0.32	11.0	2.3	2.4	8.2	2.3	2.0	1	1	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Ogr_Delta	PF04606.12	gi|288560710|ref|YP_003424196.1|	-	0.51	10.4	2.7	1.4	8.9	2.7	1.7	1	1	0	1	1	1	0	Ogr/Delta-like	zinc	finger
zf-ACC	PF17848.1	gi|288560710|ref|YP_003424196.1|	-	0.54	10.4	6.6	6.4	6.9	1.7	3.0	3	0	0	3	3	3	0	Acetyl-coA	carboxylase	zinc	finger	domain
PhnA_Zn_Ribbon	PF08274.12	gi|288560710|ref|YP_003424196.1|	-	2.8	8.0	6.6	0.92	9.5	0.4	2.3	3	0	0	3	3	2	0	PhnA	Zinc-Ribbon
zinc_ribbon_2	PF13240.6	gi|288560710|ref|YP_003424196.1|	-	3	7.7	9.6	0.94	9.3	0.7	2.5	3	0	0	3	3	2	0	zinc-ribbon	domain
ADP_ribosyl_GH	PF03747.14	gi|288560711|ref|YP_003424197.1|	-	6.3e-60	203.4	0.2	7.8e-60	203.1	0.2	1.0	1	0	0	1	1	1	1	ADP-ribosylglycohydrolase
Tsi6	PF18660.1	gi|288560711|ref|YP_003424197.1|	-	0.064	13.3	0.1	0.14	12.2	0.1	1.6	1	0	0	1	1	1	0	Tsi6
DOG1	PF14144.6	gi|288560711|ref|YP_003424197.1|	-	0.14	12.4	0.1	0.25	11.6	0.1	1.4	1	0	0	1	1	1	0	Seed	dormancy	control
ABC2_membrane	PF01061.24	gi|288560712|ref|YP_003424198.1|	-	2.4e-18	66.4	22.5	2.4e-18	66.4	22.5	1.9	1	1	1	2	2	2	2	ABC-2	type	transporter
ABC_tran	PF00005.27	gi|288560713|ref|YP_003424199.1|	-	1.1e-18	68.1	1.8	8.1e-18	65.3	0.1	2.9	2	1	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.6	gi|288560713|ref|YP_003424199.1|	-	0.0016	18.3	10.2	0.004	17.0	1.4	2.9	2	1	1	3	3	3	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_29	PF13555.6	gi|288560713|ref|YP_003424199.1|	-	0.0084	15.8	0.1	0.017	14.9	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
Arm-DNA-bind_5	PF17293.2	gi|288560713|ref|YP_003424199.1|	-	0.014	15.8	5.1	0.058	13.8	5.1	2.0	1	0	0	1	1	1	0	Arm	DNA-binding	domain
Big_1	PF02369.16	gi|288560713|ref|YP_003424199.1|	-	0.015	15.3	0.0	0.033	14.2	0.0	1.5	1	0	0	1	1	1	0	Bacterial	Ig-like	domain	(group	1)
MG4	PF17789.1	gi|288560713|ref|YP_003424199.1|	-	0.057	13.6	0.0	0.14	12.4	0.0	1.6	1	0	0	1	1	1	0	Macroglobulin	domain	MG4
Staph_haemo	PF05480.11	gi|288560713|ref|YP_003424199.1|	-	0.099	12.4	0.1	1.8	8.4	0.0	2.3	2	0	0	2	2	2	0	Staphylococcus	haemolytic	protein
MMR_HSR1	PF01926.23	gi|288560713|ref|YP_003424199.1|	-	1.5	9.0	4.4	0.53	10.4	0.2	2.4	3	0	0	3	3	3	0	50S	ribosome-binding	GTPase
Glycos_transf_2	PF00535.26	gi|288560714|ref|YP_003424200.1|	-	2.1e-24	86.3	0.2	3.3e-24	85.6	0.2	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|288560714|ref|YP_003424200.1|	-	3.6e-09	36.8	0.0	4.3e-09	36.6	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.9	gi|288560714|ref|YP_003424200.1|	-	0.0011	18.5	0.0	0.0015	18.1	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|288560714|ref|YP_003424200.1|	-	0.02	15.4	0.0	0.03	14.8	0.0	1.3	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
PGM_PMM_II	PF02879.16	gi|288560714|ref|YP_003424200.1|	-	0.066	13.8	0.5	0.31	11.7	0.1	2.2	1	1	1	2	2	2	0	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
SpuA_C	PF18033.1	gi|288560714|ref|YP_003424200.1|	-	0.1	12.6	0.1	0.35	10.9	0.0	1.9	2	1	0	2	2	2	0	SpuA	C-terminal
HATPase_c	PF02518.26	gi|288560714|ref|YP_003424200.1|	-	0.11	13.0	0.1	0.25	11.9	0.0	1.5	2	0	0	2	2	2	0	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
Epimerase	PF01370.21	gi|288560715|ref|YP_003424201.1|	-	4.7e-42	144.1	0.1	5.7e-42	143.8	0.1	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
GDP_Man_Dehyd	PF16363.5	gi|288560715|ref|YP_003424201.1|	-	9e-30	104.2	0.1	1.1e-29	103.9	0.1	1.1	1	0	0	1	1	1	1	GDP-mannose	4,6	dehydratase
3Beta_HSD	PF01073.19	gi|288560715|ref|YP_003424201.1|	-	6.7e-16	58.1	0.0	9.7e-16	57.6	0.0	1.2	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
NAD_binding_4	PF07993.12	gi|288560715|ref|YP_003424201.1|	-	5.2e-13	48.8	0.0	5.4e-09	35.6	0.0	2.2	1	1	1	2	2	2	2	Male	sterility	protein
RmlD_sub_bind	PF04321.17	gi|288560715|ref|YP_003424201.1|	-	1.3e-10	40.8	0.0	2e-10	40.3	0.0	1.2	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Polysacc_synt_2	PF02719.15	gi|288560715|ref|YP_003424201.1|	-	5e-07	29.2	0.0	7.6e-06	25.3	0.0	2.3	2	0	0	2	2	2	1	Polysaccharide	biosynthesis	protein
NAD_binding_10	PF13460.6	gi|288560715|ref|YP_003424201.1|	-	0.00036	20.5	0.0	0.00051	20.0	0.0	1.2	1	0	0	1	1	1	1	NAD(P)H-binding
adh_short	PF00106.25	gi|288560715|ref|YP_003424201.1|	-	0.0013	18.3	0.0	0.025	14.0	0.0	2.2	2	0	0	2	2	2	1	short	chain	dehydrogenase
adh_short_C2	PF13561.6	gi|288560715|ref|YP_003424201.1|	-	0.037	13.6	0.0	0.14	11.7	0.0	1.8	1	1	0	1	1	1	0	Enoyl-(Acyl	carrier	protein)	reductase
MAD	PF05557.13	gi|288560716|ref|YP_003424202.1|	-	0.00012	20.6	18.1	0.00035	19.1	13.2	2.0	1	1	1	2	2	2	1	Mitotic	checkpoint	protein
Rootletin	PF15035.6	gi|288560716|ref|YP_003424202.1|	-	0.00049	20.2	17.1	0.00063	19.8	17.1	1.2	1	0	0	1	1	1	1	Ciliary	rootlet	component,	centrosome	cohesion
FH2	PF02181.23	gi|288560716|ref|YP_003424202.1|	-	0.0017	17.5	3.7	0.0017	17.5	3.7	1.7	1	1	0	1	1	1	1	Formin	Homology	2	Domain
Spc7	PF08317.11	gi|288560716|ref|YP_003424202.1|	-	0.0051	15.7	14.8	0.062	12.2	13.6	2.0	1	1	0	1	1	1	1	Spc7	kinetochore	protein
Lebercilin	PF15619.6	gi|288560716|ref|YP_003424202.1|	-	0.0055	16.4	20.4	0.0076	15.9	19.6	1.7	1	1	0	1	1	1	1	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
TSC22	PF01166.18	gi|288560716|ref|YP_003424202.1|	-	0.0069	16.7	0.6	0.0069	16.7	0.6	3.4	2	1	1	3	3	3	1	TSC-22/dip/bun	family
Val_tRNA-synt_C	PF10458.9	gi|288560716|ref|YP_003424202.1|	-	0.0095	16.2	6.9	0.75	10.1	0.3	3.2	3	1	1	4	4	2	2	Valyl	tRNA	synthetase	tRNA	binding	arm
DUF1160	PF06648.11	gi|288560716|ref|YP_003424202.1|	-	0.011	15.7	1.4	0.018	15.0	1.4	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1160)
DUF1664	PF07889.12	gi|288560716|ref|YP_003424202.1|	-	0.012	15.6	3.9	0.11	12.6	1.3	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1664)
DivIC	PF04977.15	gi|288560716|ref|YP_003424202.1|	-	0.014	15.2	17.5	0.029	14.2	2.4	3.2	1	1	1	3	3	3	0	Septum	formation	initiator
PRKG1_interact	PF15898.5	gi|288560716|ref|YP_003424202.1|	-	0.021	15.7	18.7	0.53	11.2	6.2	2.3	1	1	1	2	2	2	0	cGMP-dependent	protein	kinase	interacting	domain
CALCOCO1	PF07888.11	gi|288560716|ref|YP_003424202.1|	-	0.022	13.6	14.5	0.028	13.3	14.5	1.0	1	0	0	1	1	1	0	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
PKcGMP_CC	PF16808.5	gi|288560716|ref|YP_003424202.1|	-	0.023	14.6	0.2	0.023	14.6	0.2	3.3	3	0	0	3	3	2	0	Coiled-coil	N-terminus	of	cGMP-dependent	protein	kinase
SMC_Nse1	PF07574.13	gi|288560716|ref|YP_003424202.1|	-	0.026	14.4	4.0	0.019	14.8	2.4	1.6	1	1	0	1	1	1	0	Nse1	non-SMC	component	of	SMC5-6	complex
TetR_C_17	PF17922.1	gi|288560716|ref|YP_003424202.1|	-	0.028	14.5	1.1	0.028	14.5	1.1	2.1	2	1	1	3	3	2	0	Tetracyclin	repressor-like,	C-terminal	domain
KASH_CCD	PF14662.6	gi|288560716|ref|YP_003424202.1|	-	0.028	14.2	18.6	0.98	9.2	6.6	2.2	1	1	1	2	2	2	0	Coiled-coil	region	of	CCDC155	or	KASH
GAS	PF13851.6	gi|288560716|ref|YP_003424202.1|	-	0.032	13.6	19.6	0.43	9.9	19.6	2.0	1	1	0	1	1	1	0	Growth-arrest	specific	micro-tubule	binding
Leu_zip	PF15294.6	gi|288560716|ref|YP_003424202.1|	-	0.038	13.5	13.5	0.63	9.5	13.2	2.1	1	1	0	1	1	1	0	Leucine	zipper
DASH_Dad4	PF08650.10	gi|288560716|ref|YP_003424202.1|	-	0.04	13.9	6.6	1.9	8.5	3.6	3.2	2	1	1	3	3	3	0	DASH	complex	subunit	Dad4
SHE3	PF17078.5	gi|288560716|ref|YP_003424202.1|	-	0.061	13.0	17.3	1	9.0	7.7	2.3	1	1	1	2	2	2	0	SWI5-dependent	HO	expression	protein	3
ADIP	PF11559.8	gi|288560716|ref|YP_003424202.1|	-	0.064	13.4	18.3	3.5	7.7	8.5	2.7	1	1	2	3	3	3	0	Afadin-	and	alpha	-actinin-Binding
DivIVA	PF05103.13	gi|288560716|ref|YP_003424202.1|	-	0.066	13.3	13.6	0.12	12.5	1.3	3.3	1	1	1	2	2	2	0	DivIVA	protein
Phage_HK97_TLTM	PF06120.11	gi|288560716|ref|YP_003424202.1|	-	0.071	12.3	7.5	1.5	8.0	0.8	2.3	1	1	2	3	3	3	0	Tail	length	tape	measure	protein
DUF1465	PF07323.12	gi|288560716|ref|YP_003424202.1|	-	0.086	12.7	6.0	0.32	10.8	2.4	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1465)
TACC_C	PF05010.14	gi|288560716|ref|YP_003424202.1|	-	0.097	12.4	15.5	0.26	11.0	14.9	2.0	1	1	0	1	1	1	0	Transforming	acidic	coiled-coil-containing	protein	(TACC),	C-terminal
Spc29	PF17082.5	gi|288560716|ref|YP_003424202.1|	-	0.11	12.3	10.8	0.37	10.6	1.1	2.4	1	1	1	2	2	2	0	Spindle	Pole	Component	29
DUF724	PF05266.14	gi|288560716|ref|YP_003424202.1|	-	0.11	12.3	11.3	2.7	7.8	8.6	2.8	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF724)
Laminin_II	PF06009.12	gi|288560716|ref|YP_003424202.1|	-	0.14	12.2	4.7	0.12	12.4	1.3	2.2	1	1	1	2	2	2	0	Laminin	Domain	II
DUF3450	PF11932.8	gi|288560716|ref|YP_003424202.1|	-	0.14	11.4	11.0	0.54	9.5	1.6	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3450)
TPR_MLP1_2	PF07926.12	gi|288560716|ref|YP_003424202.1|	-	0.16	12.0	15.0	0.79	9.8	1.5	2.5	1	1	1	2	2	2	0	TPR/MLP1/MLP2-like	protein
ISG65-75	PF11727.8	gi|288560716|ref|YP_003424202.1|	-	0.17	11.1	2.0	0.27	10.4	0.9	1.8	1	1	1	2	2	2	0	Invariant	surface	glycoprotein
Fib_alpha	PF08702.10	gi|288560716|ref|YP_003424202.1|	-	0.17	12.0	12.5	0.48	10.6	7.0	2.1	1	1	1	2	2	2	0	Fibrinogen	alpha/beta	chain	family
DUF4140	PF13600.6	gi|288560716|ref|YP_003424202.1|	-	0.2	12.1	8.7	0.89	10.0	0.2	3.0	2	1	0	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
WEMBL	PF05701.11	gi|288560716|ref|YP_003424202.1|	-	0.24	10.1	12.1	0.4	9.3	5.5	2.1	1	1	1	2	2	2	0	Weak	chloroplast	movement	under	blue	light
Fez1	PF06818.15	gi|288560716|ref|YP_003424202.1|	-	0.33	11.4	13.9	2.1	8.8	13.4	2.0	1	1	0	1	1	1	0	Fez1
DUF2730	PF10805.8	gi|288560716|ref|YP_003424202.1|	-	0.38	10.9	7.3	5.3	7.2	0.9	2.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2730)
Endotoxin_N	PF03945.14	gi|288560716|ref|YP_003424202.1|	-	0.42	10.3	4.9	0.37	10.5	2.8	1.8	1	1	1	2	2	2	0	delta	endotoxin,	N-terminal	domain
Phage_GPO	PF05929.11	gi|288560716|ref|YP_003424202.1|	-	0.43	10.1	5.3	0.36	10.4	2.0	1.9	1	1	1	2	2	2	0	Phage	capsid	scaffolding	protein	(GPO)	serine	peptidase
Fungal_TACC	PF12709.7	gi|288560716|ref|YP_003424202.1|	-	0.47	10.9	15.8	5.7	7.5	1.2	4.0	1	1	3	4	4	4	0	Fungal	Transforming	acidic	coiled-coil	(TACC)	proteins
CEP63	PF17045.5	gi|288560716|ref|YP_003424202.1|	-	0.51	10.2	20.6	0.29	11.0	11.3	2.0	1	1	1	2	2	2	0	Centrosomal	protein	of	63	kDa
FlaC_arch	PF05377.11	gi|288560716|ref|YP_003424202.1|	-	0.55	10.7	9.0	8.8	6.8	0.4	3.8	2	1	2	4	4	4	0	Flagella	accessory	protein	C	(FlaC)
Atg14	PF10186.9	gi|288560716|ref|YP_003424202.1|	-	0.56	9.2	16.9	1.3	8.1	16.9	1.6	1	1	0	1	1	1	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
TMF_TATA_bd	PF12325.8	gi|288560716|ref|YP_003424202.1|	-	0.56	10.4	19.2	0.91	9.8	3.2	2.7	1	1	1	2	2	2	0	TATA	element	modulatory	factor	1	TATA	binding
Herpes_BLRF2	PF05812.12	gi|288560716|ref|YP_003424202.1|	-	0.67	10.1	8.2	2.4	8.3	4.5	2.8	1	1	1	2	2	2	0	Herpesvirus	BLRF2	protein
Cep57_MT_bd	PF06657.13	gi|288560716|ref|YP_003424202.1|	-	0.73	10.3	14.4	1.5	9.3	0.7	3.2	2	1	1	3	3	3	0	Centrosome	microtubule-binding	domain	of	Cep57
TMF_DNA_bd	PF12329.8	gi|288560716|ref|YP_003424202.1|	-	0.78	9.8	17.3	1.3	9.1	6.8	2.9	1	1	0	2	2	2	0	TATA	element	modulatory	factor	1	DNA	binding
PI3K_P85_iSH2	PF16454.5	gi|288560716|ref|YP_003424202.1|	-	0.99	9.0	15.7	2.2	7.8	15.7	1.6	1	1	0	1	1	1	0	Phosphatidylinositol	3-kinase	regulatory	subunit	P85	inter-SH2	domain
Uso1_p115_C	PF04871.13	gi|288560716|ref|YP_003424202.1|	-	1.2	9.6	10.9	0.98	9.8	3.7	2.5	1	1	1	2	2	2	0	Uso1	/	p115	like	vesicle	tethering	protein,	C	terminal	region
CENP-F_leu_zip	PF10473.9	gi|288560716|ref|YP_003424202.1|	-	1.3	9.1	16.8	3.8	7.5	5.1	2.4	1	1	1	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
YabA	PF06156.13	gi|288560716|ref|YP_003424202.1|	-	1.3	9.7	15.1	3	8.5	1.2	3.1	1	1	1	2	2	2	0	Initiation	control	protein	YabA
PspB	PF06667.12	gi|288560716|ref|YP_003424202.1|	-	1.3	9.1	6.8	0.44	10.6	1.9	2.7	1	1	2	3	3	3	0	Phage	shock	protein	B
Nsp1_C	PF05064.13	gi|288560716|ref|YP_003424202.1|	-	1.6	8.6	10.9	3.1	7.6	2.0	3.8	1	1	1	3	3	3	0	Nsp1-like	C-terminal	region
Prefoldin	PF02996.17	gi|288560716|ref|YP_003424202.1|	-	1.6	8.7	12.3	5.9	6.8	0.1	3.9	2	1	3	5	5	5	0	Prefoldin	subunit
SMC_ScpA	PF02616.14	gi|288560716|ref|YP_003424202.1|	-	1.9	8.4	12.3	3.7	7.4	12.3	1.5	1	1	0	1	1	1	0	Segregation	and	condensation	protein	ScpA
DUF4200	PF13863.6	gi|288560716|ref|YP_003424202.1|	-	1.9	8.9	20.3	1.7	9.1	1.9	2.5	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4200)
UPF0242	PF06785.11	gi|288560716|ref|YP_003424202.1|	-	2.2	8.4	21.4	0.5	10.4	17.5	1.7	1	1	1	2	2	2	0	Uncharacterised	protein	family	(UPF0242)	N-terminus
Jnk-SapK_ap_N	PF09744.9	gi|288560716|ref|YP_003424202.1|	-	2.2	8.5	18.1	1.3	9.2	6.0	2.3	1	1	1	2	2	2	0	JNK_SAPK-associated	protein-1
CENP-H	PF05837.12	gi|288560716|ref|YP_003424202.1|	-	2.3	8.7	13.1	5	7.6	0.4	2.4	1	1	0	2	2	2	0	Centromere	protein	H	(CENP-H)
SlyX	PF04102.12	gi|288560716|ref|YP_003424202.1|	-	2.7	8.7	12.0	9.6	6.9	0.7	3.6	1	1	3	4	4	3	0	SlyX
ACCA	PF03255.14	gi|288560716|ref|YP_003424202.1|	-	2.8	7.8	10.9	0.65	9.9	2.7	2.2	1	1	1	2	2	2	0	Acetyl	co-enzyme	A	carboxylase	carboxyltransferase	alpha	subunit
DUF5446	PF17522.2	gi|288560716|ref|YP_003424202.1|	-	3.5	7.9	12.5	0.64	10.2	1.9	2.8	2	1	1	3	3	2	0	Family	of	unknown	function	(DUF5446)
DUF16	PF01519.16	gi|288560716|ref|YP_003424202.1|	-	3.8	8.1	8.5	1.5e+02	2.9	8.5	2.4	1	1	0	1	1	1	0	Protein	of	unknown	function	DUF16
Histone_HNS	PF00816.21	gi|288560716|ref|YP_003424202.1|	-	3.8	8.4	7.7	17	6.3	2.0	2.5	1	1	1	2	2	2	0	H-NS	histone	family
Syntaxin-6_N	PF09177.11	gi|288560716|ref|YP_003424202.1|	-	4	8.0	12.0	2.1	9.0	2.9	2.7	1	1	2	3	3	3	0	Syntaxin	6,	N-terminal
DNA_topoisoIV	PF00521.20	gi|288560716|ref|YP_003424202.1|	-	4.3	6.1	9.0	5.8	5.7	9.0	1.2	1	0	0	1	1	1	0	DNA	gyrase/topoisomerase	IV,	subunit	A
CLZ	PF16526.5	gi|288560716|ref|YP_003424202.1|	-	4.4	7.7	16.2	0.24	11.8	2.2	3.9	1	1	2	3	3	3	0	C-terminal	leucine	zipper	domain	of	cyclic	nucleotide-gated	channels
Cep57_CLD_2	PF14197.6	gi|288560716|ref|YP_003424202.1|	-	4.6	7.4	20.8	6.4	7.0	0.8	4.0	1	1	3	4	4	4	0	Centrosome	localisation	domain	of	PPC89
TMPIT	PF07851.13	gi|288560716|ref|YP_003424202.1|	-	5.2	6.2	10.0	2.8	7.1	1.5	2.0	1	1	1	2	2	2	0	TMPIT-like	protein
GrpE	PF01025.19	gi|288560716|ref|YP_003424202.1|	-	5.3	6.7	15.4	2.8e+03	-2.2	15.3	2.3	1	1	0	1	1	0	0	GrpE
RPW8	PF05659.11	gi|288560716|ref|YP_003424202.1|	-	5.4	6.7	9.2	4	7.1	3.4	2.8	1	1	1	2	2	2	0	Arabidopsis	broad-spectrum	mildew	resistance	protein	RPW8
Troponin	PF00992.20	gi|288560716|ref|YP_003424202.1|	-	5.6	7.3	17.7	1.8e+02	2.4	17.6	2.3	1	1	0	1	1	1	0	Troponin
CC2-LZ	PF16516.5	gi|288560716|ref|YP_003424202.1|	-	5.7	7.4	14.9	35	4.8	13.3	2.6	1	1	0	1	1	1	0	Leucine	zipper	of	domain	CC2	of	NEMO,	NF-kappa-B	essential	modulator
HIP1_clath_bdg	PF16515.5	gi|288560716|ref|YP_003424202.1|	-	5.7	7.6	14.0	2.3	8.9	4.6	2.9	1	1	2	3	3	3	0	Clathrin-binding	domain	of	Huntingtin-interacting	protein	1
DUF641	PF04859.12	gi|288560716|ref|YP_003424202.1|	-	6.2	7.2	13.3	11	6.4	5.0	2.7	2	1	0	2	2	2	0	Plant	protein	of	unknown	function	(DUF641)
HMMR_N	PF15905.5	gi|288560716|ref|YP_003424202.1|	-	9.9	5.5	17.0	40	3.5	17.0	1.9	1	1	0	1	1	1	0	Hyaluronan	mediated	motility	receptor	N-terminal
NTP_transferase	PF00483.23	gi|288560717|ref|YP_003424203.1|	-	3.3e-29	102.2	0.0	4.3e-29	101.8	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.7	gi|288560717|ref|YP_003424203.1|	-	2.1e-10	41.2	0.0	3.2e-10	40.6	0.0	1.3	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.19	gi|288560717|ref|YP_003424203.1|	-	0.028	14.2	0.0	0.056	13.2	0.0	1.5	1	0	0	1	1	1	0	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
DUF371	PF04027.13	gi|288560718|ref|YP_003424204.1|	-	7.1e-53	178.1	0.3	7.8e-53	178.0	0.3	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF371)
DUF5321	PF17254.2	gi|288560718|ref|YP_003424204.1|	-	0.16	11.4	0.0	0.23	10.9	0.0	1.2	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5321)
DUF1848	PF08902.11	gi|288560719|ref|YP_003424205.1|	-	1.9e-95	319.6	3.8	2.3e-95	319.3	3.8	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1848)
DUF4636	PF15468.6	gi|288560719|ref|YP_003424205.1|	-	0.032	13.9	0.1	0.047	13.4	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4636)
Radical_SAM	PF04055.21	gi|288560719|ref|YP_003424205.1|	-	0.051	14.0	0.3	0.43	10.9	0.1	2.4	2	1	1	3	3	3	0	Radical	SAM	superfamily
DUF123	PF01986.16	gi|288560720|ref|YP_003424206.1|	-	1.1e-30	105.9	0.1	1.5e-30	105.5	0.1	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF123
Big_3_5	PF16640.5	gi|288560721|ref|YP_003424207.1|	-	3.8e-15	55.8	11.6	1.7e-10	40.9	6.4	3.2	3	0	0	3	3	3	2	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|288560721|ref|YP_003424207.1|	-	3.1e-11	43.1	4.7	2.4e-08	33.8	1.0	3.4	3	0	0	3	3	3	2	Bacterial	Ig-like	domain	(group	1)
Invasin_D3	PF09134.10	gi|288560721|ref|YP_003424207.1|	-	1.5e-09	38.0	5.7	8.4e-06	26.0	4.2	3.1	1	1	1	2	2	2	2	Invasin,	domain	3
MG4	PF17789.1	gi|288560721|ref|YP_003424207.1|	-	2.2e-07	30.9	0.1	0.0085	16.2	0.0	2.8	2	0	0	2	2	2	2	Macroglobulin	domain	MG4
CarboxypepD_reg	PF13620.6	gi|288560721|ref|YP_003424207.1|	-	4.5e-06	26.8	1.2	0.15	12.3	0.0	2.7	2	0	0	2	2	2	2	Carboxypeptidase	regulatory-like	domain
YtkA	PF13115.6	gi|288560721|ref|YP_003424207.1|	-	0.003	18.1	0.6	0.031	14.9	0.1	2.8	2	0	0	2	2	2	1	YtkA-like
Fer4_NifH	PF00142.18	gi|288560722|ref|YP_003424208.1|	-	1.3e-101	339.6	1.6	1.6e-101	339.3	1.6	1.0	1	0	0	1	1	1	1	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
CbiA	PF01656.23	gi|288560722|ref|YP_003424208.1|	-	3e-12	46.7	0.1	4.2e-12	46.2	0.1	1.2	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.6	gi|288560722|ref|YP_003424208.1|	-	8e-12	45.4	0.4	9.6e-11	41.9	0.4	2.3	1	1	0	1	1	1	1	AAA	domain
ParA	PF10609.9	gi|288560722|ref|YP_003424208.1|	-	3e-08	33.4	0.3	2.5e-07	30.4	0.3	2.1	1	1	0	1	1	1	1	NUBPL	iron-transfer	P-loop	NTPase
ArsA_ATPase	PF02374.15	gi|288560722|ref|YP_003424208.1|	-	5.9e-08	32.2	0.4	7.8e-07	28.6	0.2	2.4	2	1	0	2	2	2	1	Anion-transporting	ATPase
AAA_24	PF13479.6	gi|288560722|ref|YP_003424208.1|	-	1.7e-05	24.6	0.0	3.2e-05	23.7	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
MeaB	PF03308.16	gi|288560722|ref|YP_003424208.1|	-	3.9e-05	22.8	0.0	4.9e-05	22.4	0.0	1.3	1	0	0	1	1	1	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
SRP54	PF00448.22	gi|288560722|ref|YP_003424208.1|	-	5e-05	23.0	0.6	0.00011	21.9	0.2	1.7	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
ABC_tran	PF00005.27	gi|288560722|ref|YP_003424208.1|	-	0.00028	21.4	0.0	0.0004	20.9	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_22	PF13401.6	gi|288560722|ref|YP_003424208.1|	-	0.0034	17.7	0.0	0.0062	16.8	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
DUF87	PF01935.17	gi|288560722|ref|YP_003424208.1|	-	0.0036	17.4	0.2	0.0072	16.4	0.1	1.6	2	0	0	2	2	2	1	Helicase	HerA,	central	domain
MipZ	PF09140.11	gi|288560722|ref|YP_003424208.1|	-	0.0085	15.4	0.1	0.022	14.0	0.0	1.7	2	0	0	2	2	2	1	ATPase	MipZ
AAA_16	PF13191.6	gi|288560722|ref|YP_003424208.1|	-	0.014	15.8	0.0	0.036	14.5	0.0	1.6	2	0	0	2	2	2	0	AAA	ATPase	domain
PglD_N	PF17836.1	gi|288560722|ref|YP_003424208.1|	-	0.022	15.4	0.2	0.082	13.6	0.0	2.1	2	0	0	2	2	2	0	PglD	N-terminal	domain
AAA_7	PF12775.7	gi|288560722|ref|YP_003424208.1|	-	0.044	13.3	0.1	0.067	12.7	0.1	1.2	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
NB-ARC	PF00931.22	gi|288560722|ref|YP_003424208.1|	-	0.053	12.7	0.1	0.11	11.7	0.1	1.5	1	0	0	1	1	1	0	NB-ARC	domain
KAP_NTPase	PF07693.14	gi|288560722|ref|YP_003424208.1|	-	0.054	12.7	0.0	0.054	12.7	0.0	1.1	1	0	0	1	1	1	0	KAP	family	P-loop	domain
AAA_25	PF13481.6	gi|288560722|ref|YP_003424208.1|	-	0.069	12.7	0.0	0.094	12.3	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.22	gi|288560722|ref|YP_003424208.1|	-	0.071	13.5	0.0	0.15	12.4	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
NTPase_1	PF03266.15	gi|288560722|ref|YP_003424208.1|	-	0.072	13.0	0.1	0.15	12.0	0.1	1.6	1	0	0	1	1	1	0	NTPase
AAA_30	PF13604.6	gi|288560722|ref|YP_003424208.1|	-	0.08	12.7	0.0	0.12	12.1	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_10	PF12846.7	gi|288560722|ref|YP_003424208.1|	-	0.15	10.9	0.1	0.25	10.2	0.1	1.3	1	0	0	1	1	1	0	AAA-like	domain
DUF815	PF05673.13	gi|288560722|ref|YP_003424208.1|	-	0.16	11.1	0.0	0.25	10.4	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
CBP_BcsQ	PF06564.12	gi|288560722|ref|YP_003424208.1|	-	0.19	11.2	0.0	1.4	8.4	0.0	2.2	3	0	0	3	3	3	0	Cellulose	biosynthesis	protein	BcsQ
Peptidase_U32	PF01136.19	gi|288560723|ref|YP_003424209.1|	-	1.7e-80	269.6	0.0	2.4e-80	269.1	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	U32
Peptidase_U32_C	PF16325.5	gi|288560723|ref|YP_003424209.1|	-	0.00081	19.6	0.1	0.0021	18.3	0.1	1.7	1	0	0	1	1	1	1	Peptidase	family	U32	C-terminal	domain
GTP_EFTU_D4	PF14578.6	gi|288560723|ref|YP_003424209.1|	-	0.0075	16.1	0.2	0.019	14.8	0.2	1.7	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	4
MerR_1	PF13411.6	gi|288560723|ref|YP_003424209.1|	-	0.044	13.9	0.0	2.9	8.1	0.1	3.1	3	0	0	3	3	3	0	MerR	HTH	family	regulatory	protein
GATase_6	PF13522.6	gi|288560724|ref|YP_003424210.1|	-	1.8e-22	80.0	0.0	3.6e-22	79.0	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_7	PF13537.6	gi|288560724|ref|YP_003424210.1|	-	4.1e-22	78.4	0.0	6.6e-22	77.7	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_4	PF13230.6	gi|288560724|ref|YP_003424210.1|	-	3.5e-10	39.3	0.0	8e-09	34.8	0.0	2.1	2	0	0	2	2	2	1	Glutamine	amidotransferases	class-II
Pribosyltran	PF00156.27	gi|288560724|ref|YP_003424210.1|	-	2.4e-07	30.4	0.1	4.6e-07	29.5	0.1	1.3	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
PurL_C	PF16904.5	gi|288560724|ref|YP_003424210.1|	-	0.18	12.1	0.0	0.41	11.0	0.0	1.5	1	0	0	1	1	1	0	Phosphoribosylformylglycinamidine	synthase	II	C-terminus
Rootletin	PF15035.6	gi|288560725|ref|YP_003424211.1|	-	2.7e-06	27.5	2.2	2.7e-06	27.5	2.2	1.7	2	0	0	2	2	2	1	Ciliary	rootlet	component,	centrosome	cohesion
GAS	PF13851.6	gi|288560725|ref|YP_003424211.1|	-	0.00053	19.4	6.8	0.001	18.4	6.8	1.4	1	0	0	1	1	1	1	Growth-arrest	specific	micro-tubule	binding
Csm1_N	PF18504.1	gi|288560725|ref|YP_003424211.1|	-	0.025	14.9	3.9	0.061	13.7	3.9	1.7	1	0	0	1	1	1	0	Csm1	N-terminal	domain
KASH_CCD	PF14662.6	gi|288560725|ref|YP_003424211.1|	-	0.026	14.4	4.9	0.052	13.4	4.9	1.4	1	0	0	1	1	1	0	Coiled-coil	region	of	CCDC155	or	KASH
HALZ	PF02183.18	gi|288560725|ref|YP_003424211.1|	-	0.055	13.7	9.7	2	8.7	1.1	3.3	1	1	2	3	3	3	0	Homeobox	associated	leucine	zipper
DUF641	PF04859.12	gi|288560725|ref|YP_003424211.1|	-	0.13	12.6	3.1	0.3	11.4	3.1	1.6	1	0	0	1	1	1	0	Plant	protein	of	unknown	function	(DUF641)
DUF3438	PF11920.8	gi|288560725|ref|YP_003424211.1|	-	0.23	10.7	0.6	0.44	9.7	0.6	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3438)
DivIC	PF04977.15	gi|288560725|ref|YP_003424211.1|	-	0.25	11.1	6.2	2.9	7.7	2.9	2.6	1	1	1	2	2	2	0	Septum	formation	initiator
DUF1664	PF07889.12	gi|288560725|ref|YP_003424211.1|	-	0.26	11.4	2.8	0.28	11.2	1.3	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
Syntaxin-6_N	PF09177.11	gi|288560725|ref|YP_003424211.1|	-	2.4	8.8	9.4	0.22	12.1	2.2	2.8	3	0	0	3	3	3	0	Syntaxin	6,	N-terminal
bZIP_1	PF00170.21	gi|288560725|ref|YP_003424211.1|	-	7.2	6.8	10.5	2.2	8.4	6.2	2.4	2	1	0	2	2	2	0	bZIP	transcription	factor
Epimerase	PF01370.21	gi|288560726|ref|YP_003424212.1|	-	1.5e-58	198.1	0.0	1.8e-58	197.9	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
GDP_Man_Dehyd	PF16363.5	gi|288560726|ref|YP_003424212.1|	-	4.6e-55	187.3	0.0	5.9e-55	187.0	0.0	1.1	1	0	0	1	1	1	1	GDP-mannose	4,6	dehydratase
RmlD_sub_bind	PF04321.17	gi|288560726|ref|YP_003424212.1|	-	3.2e-17	62.6	0.0	6.1e-17	61.6	0.0	1.4	2	0	0	2	2	2	1	RmlD	substrate	binding	domain
3Beta_HSD	PF01073.19	gi|288560726|ref|YP_003424212.1|	-	3.2e-15	55.9	0.0	1.7e-12	46.9	0.0	2.1	2	0	0	2	2	2	2	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
Polysacc_synt_2	PF02719.15	gi|288560726|ref|YP_003424212.1|	-	1.1e-13	51.0	0.0	1.6e-11	43.9	0.0	3.2	2	1	0	2	2	2	1	Polysaccharide	biosynthesis	protein
NAD_binding_10	PF13460.6	gi|288560726|ref|YP_003424212.1|	-	2.1e-09	37.5	0.0	4.2e-09	36.5	0.0	1.4	1	0	0	1	1	1	1	NAD(P)H-binding
NAD_binding_4	PF07993.12	gi|288560726|ref|YP_003424212.1|	-	1.9e-06	27.3	0.1	0.00021	20.5	0.0	2.5	1	1	1	2	2	2	1	Male	sterility	protein
KR	PF08659.10	gi|288560726|ref|YP_003424212.1|	-	1.1e-05	25.4	0.1	8.9e-05	22.5	0.1	2.1	1	1	0	1	1	1	1	KR	domain
NmrA	PF05368.13	gi|288560726|ref|YP_003424212.1|	-	2.4e-05	24.0	0.0	4.2e-05	23.2	0.0	1.5	1	0	0	1	1	1	1	NmrA-like	family
adh_short	PF00106.25	gi|288560726|ref|YP_003424212.1|	-	0.034	13.6	0.0	0.056	12.9	0.0	1.4	1	0	0	1	1	1	0	short	chain	dehydrogenase
Methyltransf_11	PF08241.12	gi|288560726|ref|YP_003424212.1|	-	0.18	12.5	0.0	7.1	7.4	0.0	2.3	2	0	0	2	2	2	0	Methyltransferase	domain
FAD_binding_3	PF01494.19	gi|288560727|ref|YP_003424213.1|	-	1.3e-23	83.8	0.3	1e-22	80.9	0.3	2.1	1	1	0	1	1	1	1	FAD	binding	domain
DAO	PF01266.24	gi|288560727|ref|YP_003424213.1|	-	1.3e-09	38.1	0.8	0.00015	21.5	0.4	2.2	1	1	1	2	2	2	2	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.24	gi|288560727|ref|YP_003424213.1|	-	5.2e-08	32.4	0.4	1.4e-06	27.7	0.1	2.1	2	0	0	2	2	2	1	FAD	binding	domain
Trp_halogenase	PF04820.14	gi|288560727|ref|YP_003424213.1|	-	1.7e-07	30.5	0.1	2.5e-05	23.3	0.0	2.1	2	0	0	2	2	2	2	Tryptophan	halogenase
HI0933_like	PF03486.14	gi|288560727|ref|YP_003424213.1|	-	9.6e-07	27.8	3.1	3.2e-05	22.8	0.5	2.8	3	0	0	3	3	3	1	HI0933-like	protein
Lycopene_cycl	PF05834.12	gi|288560727|ref|YP_003424213.1|	-	2.8e-06	26.7	0.0	7.7e-05	21.9	0.0	2.2	2	0	0	2	2	2	1	Lycopene	cyclase	protein
Pyr_redox_2	PF07992.14	gi|288560727|ref|YP_003424213.1|	-	4.6e-06	26.1	0.6	4.6e-06	26.1	0.6	2.1	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.6	gi|288560727|ref|YP_003424213.1|	-	5.8e-06	26.4	0.0	1.6e-05	25.0	0.0	1.8	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_oxidored	PF12831.7	gi|288560727|ref|YP_003424213.1|	-	9.7e-06	25.2	4.4	7.4e-05	22.3	3.3	2.3	2	1	0	2	2	2	1	FAD	dependent	oxidoreductase
GIDA	PF01134.22	gi|288560727|ref|YP_003424213.1|	-	1.3e-05	24.5	0.0	2.7e-05	23.4	0.0	1.5	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
Thi4	PF01946.17	gi|288560727|ref|YP_003424213.1|	-	0.00018	20.9	0.1	0.00038	19.8	0.1	1.6	1	0	0	1	1	1	1	Thi4	family
AlaDh_PNT_C	PF01262.21	gi|288560727|ref|YP_003424213.1|	-	0.0012	18.2	0.1	0.0023	17.3	0.1	1.5	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
Pyr_redox	PF00070.27	gi|288560727|ref|YP_003424213.1|	-	0.0016	18.9	0.1	0.021	15.4	0.0	2.6	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
3HCDH_N	PF02737.18	gi|288560727|ref|YP_003424213.1|	-	0.0026	17.7	0.2	0.026	14.4	0.0	2.3	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Pyr_redox_3	PF13738.6	gi|288560727|ref|YP_003424213.1|	-	0.033	13.4	0.7	0.31	10.3	0.3	2.1	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
XdhC_C	PF13478.6	gi|288560727|ref|YP_003424213.1|	-	0.065	13.7	0.0	0.11	13.0	0.0	1.4	1	0	0	1	1	1	0	XdhC	Rossmann	domain
2-Hacid_dh_C	PF02826.19	gi|288560727|ref|YP_003424213.1|	-	0.11	11.9	0.0	0.2	11.0	0.0	1.4	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_7	PF13241.6	gi|288560727|ref|YP_003424213.1|	-	0.17	12.3	0.1	0.47	10.9	0.1	1.7	1	1	0	1	1	1	0	Putative	NAD(P)-binding
Fer4	PF00037.27	gi|288560728|ref|YP_003424214.1|	-	2.4e-07	30.3	22.1	2.7e-06	26.9	3.5	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|288560728|ref|YP_003424214.1|	-	4.4e-05	23.3	2.5	4.4e-05	23.3	2.5	2.5	2	1	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|288560728|ref|YP_003424214.1|	-	5.8e-05	23.1	16.7	7.1e-05	22.9	16.7	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|288560728|ref|YP_003424214.1|	-	7.6e-05	22.6	2.8	7.6e-05	22.6	2.8	2.4	2	1	0	2	2	1	1	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|288560728|ref|YP_003424214.1|	-	0.0001	23.1	15.2	0.002	19.0	1.9	2.1	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_7	PF12838.7	gi|288560728|ref|YP_003424214.1|	-	0.0017	18.9	2.0	0.0017	18.9	2.0	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|288560728|ref|YP_003424214.1|	-	0.0025	18.2	2.7	0.0025	18.2	2.7	2.5	2	1	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|288560728|ref|YP_003424214.1|	-	0.0036	17.7	14.8	0.0062	17.0	0.9	2.2	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|288560728|ref|YP_003424214.1|	-	0.014	15.6	20.5	0.069	13.3	20.7	1.8	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|288560728|ref|YP_003424214.1|	-	0.049	14.2	2.3	0.049	14.2	2.3	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|288560728|ref|YP_003424214.1|	-	0.12	12.5	20.5	0.27	11.4	20.8	1.5	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|288560728|ref|YP_003424214.1|	-	0.22	12.5	4.4	0.22	12.5	4.4	2.5	2	1	0	2	2	2	0	4Fe-4S	binding	domain
Hexapep	PF00132.24	gi|288560729|ref|YP_003424215.1|	-	1.3e-24	84.9	20.7	1.1e-10	40.8	2.7	4.3	2	1	1	4	4	4	4	Bacterial	transferase	hexapeptide	(six	repeats)
Hexapep_2	PF14602.6	gi|288560729|ref|YP_003424215.1|	-	1.6e-13	50.2	19.9	3.6e-07	29.8	1.3	4.8	4	1	0	4	4	4	4	Hexapeptide	repeat	of	succinyl-transferase
Zn_Tnp_IS1595	PF12760.7	gi|288560730|ref|YP_003424216.1|	-	0.00056	19.8	1.6	0.00096	19.1	1.6	1.4	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.11	gi|288560730|ref|YP_003424216.1|	-	0.0014	18.5	0.3	0.0014	18.5	0.3	1.7	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
RNA_POL_M_15KD	PF02150.16	gi|288560730|ref|YP_003424216.1|	-	0.03	14.2	1.4	0.2	11.6	0.0	2.3	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
Ribosomal_L37ae	PF01780.19	gi|288560730|ref|YP_003424216.1|	-	0.031	14.4	1.5	0.049	13.7	1.5	1.3	1	0	0	1	1	1	0	Ribosomal	L37ae	protein	family
DUF35_N	PF12172.8	gi|288560730|ref|YP_003424216.1|	-	0.075	12.9	0.2	0.075	12.9	0.2	1.9	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Lar_restr_allev	PF14354.6	gi|288560730|ref|YP_003424216.1|	-	0.091	13.2	2.0	0.21	12.0	2.0	1.8	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
TF_Zn_Ribbon	PF08271.12	gi|288560730|ref|YP_003424216.1|	-	0.32	10.5	0.1	0.32	10.5	0.1	2.8	4	1	0	4	4	4	0	TFIIB	zinc-binding
DUF2387	PF09526.10	gi|288560730|ref|YP_003424216.1|	-	0.51	10.5	6.3	0.5	10.6	4.2	2.0	1	1	1	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
Zn_Tnp_IS1	PF03811.13	gi|288560730|ref|YP_003424216.1|	-	1	9.2	4.0	8.4	6.2	4.0	2.0	1	1	0	1	1	1	0	InsA	N-terminal	domain
zf-ISL3	PF14690.6	gi|288560730|ref|YP_003424216.1|	-	5.2	7.8	7.8	0.61	10.8	0.7	2.1	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
LEM	PF03020.15	gi|288560730|ref|YP_003424216.1|	-	7.4	6.2	5.4	3.6	7.2	2.8	1.9	2	0	0	2	2	2	0	LEM	domain
QueC	PF06508.13	gi|288560731|ref|YP_003424217.1|	-	0.0019	17.7	0.0	0.0034	16.9	0.0	1.4	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
tRNA_Me_trans	PF03054.16	gi|288560731|ref|YP_003424217.1|	-	0.0033	16.3	0.1	0.027	13.3	0.1	2.0	1	1	0	1	1	1	1	tRNA	methyl	transferase
KH_2	PF07650.17	gi|288560731|ref|YP_003424217.1|	-	0.095	12.5	1.2	0.83	9.5	0.8	2.3	1	1	1	2	2	2	0	KH	domain
Phage_clamp_A	PF16790.5	gi|288560731|ref|YP_003424217.1|	-	0.11	12.9	0.0	0.25	11.8	0.0	1.5	1	0	0	1	1	1	0	Bacteriophage	clamp	loader	A	subunit
Lyase_1	PF00206.20	gi|288560732|ref|YP_003424218.1|	-	1.6e-66	224.9	0.1	2.3e-66	224.3	0.1	1.3	1	0	0	1	1	1	1	Lyase
ASL_C2	PF14698.6	gi|288560732|ref|YP_003424218.1|	-	8.1e-19	68.2	0.5	8.5e-18	64.9	0.0	2.8	3	0	0	3	3	3	1	Argininosuccinate	lyase	C-terminal
MitMem_reg	PF13012.6	gi|288560732|ref|YP_003424218.1|	-	0.045	14.2	0.1	0.42	11.1	0.0	2.4	2	0	0	2	2	2	0	Maintenance	of	mitochondrial	structure	and	function
DUF3563	PF12086.8	gi|288560732|ref|YP_003424218.1|	-	0.1	12.3	0.0	0.25	11.1	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3563)
DUF1048	PF06304.11	gi|288560732|ref|YP_003424218.1|	-	0.14	12.7	0.6	5.6	7.5	0.0	3.0	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1048)
Ribosomal_S27	PF01599.19	gi|288560733|ref|YP_003424219.1|	-	1.2e-18	67.0	3.1	1.4e-18	66.8	3.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S27a
Ribosomal_L37e	PF01907.19	gi|288560733|ref|YP_003424219.1|	-	0.0026	17.9	0.9	0.0033	17.6	0.9	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L37e
DZR	PF12773.7	gi|288560733|ref|YP_003424219.1|	-	0.013	15.5	0.5	0.016	15.2	0.5	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
zinc_ribbon_2	PF13240.6	gi|288560733|ref|YP_003424219.1|	-	0.014	15.1	4.0	0.46	10.3	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
MqsA_antitoxin	PF15731.5	gi|288560733|ref|YP_003424219.1|	-	0.017	15.2	0.3	0.02	15.0	0.3	1.3	1	1	0	1	1	1	0	Antitoxin	component	of	bacterial	toxin-antitoxin	system,	MqsA
Nudix_N_2	PF14803.6	gi|288560733|ref|YP_003424219.1|	-	0.024	14.5	5.2	0.23	11.4	4.5	2.4	1	1	1	2	2	2	0	Nudix	N-terminal
zf-NADH-PPase	PF09297.11	gi|288560733|ref|YP_003424219.1|	-	0.031	13.9	3.8	0.22	11.2	0.4	2.1	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
DUF2387	PF09526.10	gi|288560733|ref|YP_003424219.1|	-	0.042	14.0	1.5	0.075	13.2	1.5	1.4	1	1	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
Zn_Tnp_IS1595	PF12760.7	gi|288560733|ref|YP_003424219.1|	-	0.067	13.2	2.7	0.1	12.6	2.6	1.4	1	1	0	1	1	1	0	Transposase	zinc-ribbon	domain
zf_C2H2_10	PF18414.1	gi|288560733|ref|YP_003424219.1|	-	0.1	12.1	2.0	3.2	7.4	0.1	2.1	2	0	0	2	2	2	0	C2H2	type	zinc-finger
RNA_POL_M_15KD	PF02150.16	gi|288560733|ref|YP_003424219.1|	-	0.44	10.5	6.8	5.5	6.9	6.8	2.2	1	1	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
zf_UBZ	PF18439.1	gi|288560733|ref|YP_003424219.1|	-	0.52	10.0	2.4	8.9	6.0	0.1	2.2	2	0	0	2	2	2	0	Ubiquitin-Binding	Zinc	Finger
Ribosomal_S24e	PF01282.19	gi|288560734|ref|YP_003424220.1|	-	2.4e-19	69.0	0.0	3.2e-19	68.7	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S24e
DUF359	PF04019.12	gi|288560735|ref|YP_003424221.1|	-	1.4e-34	118.5	0.1	1.7e-34	118.2	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF359)
Recombinase	PF07508.13	gi|288560735|ref|YP_003424221.1|	-	0.019	15.3	0.0	0.028	14.8	0.0	1.2	1	0	0	1	1	1	0	Recombinase
DUF4013	PF13197.6	gi|288560736|ref|YP_003424222.1|	-	9.5e-32	110.1	34.0	9.5e-32	110.1	34.0	2.7	2	1	1	3	3	3	1	Protein	of	unknown	function	(DUF4013)
DDE_Tnp_1_assoc	PF13808.6	gi|288560736|ref|YP_003424222.1|	-	0.56	10.3	2.9	11	6.1	0.0	2.8	3	0	0	3	3	3	0	DDE_Tnp_1-associated
Spt4	PF06093.13	gi|288560737|ref|YP_003424223.1|	-	5.3e-15	55.3	0.0	7.6e-15	54.8	0.0	1.2	1	0	0	1	1	1	1	Spt4/RpoE2	zinc	finger
RecR	PF02132.15	gi|288560737|ref|YP_003424223.1|	-	0.0035	16.9	2.5	0.0051	16.4	2.5	1.2	1	0	0	1	1	1	1	RecR	protein
DUF3797	PF12677.7	gi|288560737|ref|YP_003424223.1|	-	0.0054	16.6	0.3	0.0078	16.1	0.1	1.4	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF3797)
Nop10p	PF04135.12	gi|288560737|ref|YP_003424223.1|	-	0.037	14.1	1.3	0.062	13.4	1.3	1.4	1	0	0	1	1	1	0	Nucleolar	RNA-binding	protein,	Nop10p	family
PolC_DP2	PF03833.13	gi|288560737|ref|YP_003424223.1|	-	0.051	11.4	0.3	0.044	11.7	0.3	1.0	1	0	0	1	1	1	0	DNA	polymerase	II	large	subunit	DP2
zf-ribbon_3	PF13248.6	gi|288560737|ref|YP_003424223.1|	-	0.2	11.1	0.6	0.2	11.1	0.6	2.1	2	0	0	2	2	2	0	zinc-ribbon	domain
SHS2_Rpb7-N	PF03876.17	gi|288560738|ref|YP_003424224.1|	-	2.3e-17	63.1	0.0	4.6e-17	62.1	0.0	1.5	1	0	0	1	1	1	1	SHS2	domain	found	in	N	terminus	of	Rpb7p/Rpc25p/MJ0397
S1	PF00575.23	gi|288560738|ref|YP_003424224.1|	-	7.5e-15	55.0	0.5	1.5e-14	54.0	0.5	1.6	1	0	0	1	1	1	1	S1	RNA	binding	domain
PIN_9	PF18477.1	gi|288560739|ref|YP_003424225.1|	-	1.9e-29	102.3	0.4	2.2e-29	102.1	0.4	1.0	1	0	0	1	1	1	1	PIN	like	domain
PIN_4	PF13638.6	gi|288560739|ref|YP_003424225.1|	-	0.00045	20.5	2.8	0.22	11.8	0.2	2.2	1	1	1	2	2	2	2	PIN	domain
PIN_12	PF16289.5	gi|288560739|ref|YP_003424225.1|	-	0.0016	19.0	2.6	0.0021	18.6	2.6	1.2	1	1	0	1	1	1	1	PIN	domain
PIN	PF01850.21	gi|288560739|ref|YP_003424225.1|	-	0.0045	17.5	0.1	0.0051	17.3	0.1	1.1	1	0	0	1	1	1	1	PIN	domain
Fcf1	PF04900.12	gi|288560739|ref|YP_003424225.1|	-	0.044	14.2	0.0	0.12	12.8	0.0	1.6	1	1	0	1	1	1	0	Fcf1
eIF2_C	PF09173.11	gi|288560740|ref|YP_003424226.1|	-	7.4e-31	106.3	0.1	2.1e-30	104.8	0.1	1.8	1	0	0	1	1	1	1	Initiation	factor	eIF2	gamma,	C	terminal
GTP_EFTU	PF00009.27	gi|288560740|ref|YP_003424226.1|	-	8.2e-31	107.1	3.7	1.1e-29	103.4	3.7	2.2	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D2	PF03144.25	gi|288560740|ref|YP_003424226.1|	-	6.9e-08	32.8	0.7	2.3e-07	31.1	0.7	1.9	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.23	gi|288560740|ref|YP_003424226.1|	-	0.00017	21.7	0.0	0.00047	20.2	0.0	1.8	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
RsgA_GTPase	PF03193.16	gi|288560740|ref|YP_003424226.1|	-	0.00072	19.5	1.6	0.0065	16.4	0.1	2.4	2	0	0	2	2	2	1	RsgA	GTPase
DUF35_N	PF12172.8	gi|288560740|ref|YP_003424226.1|	-	0.0017	18.2	0.7	0.0036	17.1	0.7	1.5	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
PduV-EutP	PF10662.9	gi|288560740|ref|YP_003424226.1|	-	0.0039	16.9	4.7	0.3	10.8	0.0	2.9	4	0	0	4	4	4	2	Ethanolamine	utilisation	-	propanediol	utilisation
Nop10p	PF04135.12	gi|288560740|ref|YP_003424226.1|	-	0.0052	16.8	1.4	0.011	15.7	1.4	1.5	1	0	0	1	1	1	1	Nucleolar	RNA-binding	protein,	Nop10p	family
PolC_DP2	PF03833.13	gi|288560740|ref|YP_003424226.1|	-	0.0076	14.2	0.4	0.01	13.7	0.4	1.1	1	0	0	1	1	1	1	DNA	polymerase	II	large	subunit	DP2
DZR	PF12773.7	gi|288560740|ref|YP_003424226.1|	-	0.014	15.4	1.0	0.035	14.1	1.0	1.6	1	0	0	1	1	1	0	Double	zinc	ribbon
MMR_HSR1_Xtn	PF16897.5	gi|288560740|ref|YP_003424226.1|	-	0.11	12.5	0.1	0.27	11.3	0.1	1.6	1	0	0	1	1	1	0	C-terminal	region	of	MMR_HSR1	domain
NOB1_Zn_bind	PF08772.11	gi|288560740|ref|YP_003424226.1|	-	0.44	10.7	3.9	0.28	11.4	1.3	1.9	2	0	0	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
FeoB_N	PF02421.18	gi|288560740|ref|YP_003424226.1|	-	1.6	8.3	4.1	20	4.7	0.0	2.8	3	1	0	3	3	3	0	Ferrous	iron	transport	protein	B
zf-ribbon_3	PF13248.6	gi|288560740|ref|YP_003424226.1|	-	7.1	6.2	8.9	0.66	9.5	3.9	2.0	2	0	0	2	2	2	0	zinc-ribbon	domain
Ribosomal_S6e	PF01092.19	gi|288560741|ref|YP_003424227.1|	-	4.6e-39	133.3	0.7	5e-39	133.1	0.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S6e
GTP_EFTU	PF00009.27	gi|288560742|ref|YP_003424228.1|	-	2e-31	109.0	0.0	1.1e-30	106.7	0.0	2.0	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D4	PF14578.6	gi|288560742|ref|YP_003424228.1|	-	9.5e-29	99.1	0.6	2.7e-28	97.7	0.1	2.1	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	4
IF-2	PF11987.8	gi|288560742|ref|YP_003424228.1|	-	2.3e-21	75.9	1.3	5.4e-21	74.7	1.0	1.8	2	0	0	2	2	2	1	Translation-initiation	factor	2
GTP_EFTU_D2	PF03144.25	gi|288560742|ref|YP_003424228.1|	-	3.7e-09	36.8	1.2	3.5e-08	33.7	0.1	2.9	2	1	0	2	2	2	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.23	gi|288560742|ref|YP_003424228.1|	-	5.9e-08	32.8	0.0	1.7e-07	31.3	0.0	1.9	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
Dynamin_N	PF00350.23	gi|288560742|ref|YP_003424228.1|	-	0.015	15.4	0.0	0.63	10.1	0.0	2.6	1	1	1	2	2	2	0	Dynamin	family
Roc	PF08477.13	gi|288560742|ref|YP_003424228.1|	-	0.067	13.4	0.0	0.39	10.9	0.0	2.3	2	1	0	2	2	2	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
NDK	PF00334.19	gi|288560743|ref|YP_003424229.1|	-	6.5e-55	184.8	0.0	7.3e-55	184.7	0.0	1.0	1	0	0	1	1	1	1	Nucleoside	diphosphate	kinase
Ribosomal_L24e	PF01246.20	gi|288560744|ref|YP_003424230.1|	-	2.5e-20	72.5	2.7	2.6e-20	72.4	2.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L24e
YHS	PF04945.13	gi|288560744|ref|YP_003424230.1|	-	9e-06	25.7	2.0	1.2e-05	25.2	2.0	1.1	1	0	0	1	1	1	1	YHS	domain
zf-FCS	PF06467.14	gi|288560744|ref|YP_003424230.1|	-	2.4e-05	24.2	3.5	3.2e-05	23.8	3.5	1.2	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
Arc_trans_TRASH	PF08394.10	gi|288560744|ref|YP_003424230.1|	-	0.0002	21.6	1.6	0.00033	20.9	1.6	1.4	1	1	0	1	1	1	1	Archaeal	TRASH	domain
zf-FLZ	PF04570.14	gi|288560744|ref|YP_003424230.1|	-	0.0011	18.5	3.2	0.0016	17.9	3.2	1.3	1	1	0	1	1	1	1	zinc-finger	of	the	FCS-type,	C2-C2
zf-C4_ClpX	PF06689.13	gi|288560744|ref|YP_003424230.1|	-	0.02	14.7	0.1	0.02	14.7	0.1	1.7	2	0	0	2	2	2	0	ClpX	C4-type	zinc	finger
Ta0938	PF11494.8	gi|288560744|ref|YP_003424230.1|	-	0.035	14.4	0.3	0.036	14.4	0.3	1.1	1	0	0	1	1	1	0	Ta0938
DUF2116	PF09889.9	gi|288560744|ref|YP_003424230.1|	-	0.077	13.0	0.5	5	7.2	0.1	2.1	2	0	0	2	2	2	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
DUF3268	PF11672.8	gi|288560744|ref|YP_003424230.1|	-	0.085	13.2	0.4	0.087	13.2	0.4	1.1	1	0	0	1	1	1	0	zinc-finger-containing	domain
LIM	PF00412.22	gi|288560744|ref|YP_003424230.1|	-	0.096	12.9	1.9	0.41	10.9	2.1	1.8	1	1	1	2	2	2	0	LIM	domain
DUF2175	PF09943.9	gi|288560744|ref|YP_003424230.1|	-	0.11	12.9	0.6	0.12	12.7	0.6	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2175)
VATC	PF18716.1	gi|288560744|ref|YP_003424230.1|	-	0.17	11.8	7.2	0.46	10.4	7.2	1.7	1	1	0	1	1	1	0	Vms1-associating	treble	clef	domain
Ribosomal_S28e	PF01200.18	gi|288560745|ref|YP_003424231.1|	-	1e-30	105.5	1.3	1.1e-30	105.4	1.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S28e
Ribosomal_L7Ae	PF01248.26	gi|288560746|ref|YP_003424232.1|	-	2e-27	94.8	0.6	2.7e-27	94.3	0.6	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
RNase_P_pop3	PF08228.11	gi|288560746|ref|YP_003424232.1|	-	4.8e-05	23.5	0.0	5.5e-05	23.3	0.0	1.1	1	0	0	1	1	1	1	RNase	P	subunit	Pop3
DUF1269	PF06897.12	gi|288560746|ref|YP_003424232.1|	-	0.0035	17.6	2.6	0.35	11.2	0.0	2.2	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF1269)
PELOTA_1	PF15608.6	gi|288560746|ref|YP_003424232.1|	-	0.041	13.8	0.1	0.059	13.3	0.1	1.3	1	0	0	1	1	1	0	PELOTA	RNA	binding	domain
LacI	PF00356.21	gi|288560746|ref|YP_003424232.1|	-	0.13	12.0	1.9	0.33	10.8	0.3	2.5	2	2	1	3	3	3	0	Bacterial	regulatory	proteins,	lacI	family
CBFD_NFYB_HMF	PF00808.23	gi|288560747|ref|YP_003424233.1|	-	3.4e-21	75.3	0.6	3.7e-21	75.2	0.6	1.0	1	0	0	1	1	1	1	Histone-like	transcription	factor	(CBF/NF-Y)	and	archaeal	histone
Histone	PF00125.24	gi|288560747|ref|YP_003424233.1|	-	8.7e-09	35.8	0.1	9.9e-09	35.6	0.1	1.1	1	0	0	1	1	1	1	Core	histone	H2A/H2B/H3/H4
Bromo_TP	PF07524.13	gi|288560747|ref|YP_003424233.1|	-	5.9e-07	29.4	0.0	6.7e-07	29.2	0.0	1.0	1	0	0	1	1	1	1	Bromodomain	associated
TFIID-31kDa	PF02291.15	gi|288560747|ref|YP_003424233.1|	-	7.1e-07	29.3	0.0	7.9e-07	29.2	0.0	1.0	1	0	0	1	1	1	1	Transcription	initiation	factor	IID,	31kD	subunit
CENP-T_C	PF15511.6	gi|288560747|ref|YP_003424233.1|	-	1.7e-06	28.1	0.0	1.8e-06	28.1	0.0	1.0	1	0	0	1	1	1	1	Centromere	kinetochore	component	CENP-T	histone	fold
TAF	PF02969.17	gi|288560747|ref|YP_003424233.1|	-	1.9e-06	28.0	0.1	1.9e-06	27.9	0.1	1.1	1	0	0	1	1	1	1	TATA	box	binding	protein	associated	factor	(TAF)
CENP-S	PF15630.6	gi|288560747|ref|YP_003424233.1|	-	4.8e-06	26.9	0.0	5.1e-06	26.8	0.0	1.2	1	0	0	1	1	1	1	CENP-S	protein
TFIID_20kDa	PF03847.13	gi|288560747|ref|YP_003424233.1|	-	0.00045	20.6	0.0	0.00049	20.5	0.0	1.1	1	0	0	1	1	1	1	Transcription	initiation	factor	TFIID	subunit	A
TFIID-18kDa	PF02269.16	gi|288560747|ref|YP_003424233.1|	-	0.0024	17.8	0.0	0.0027	17.7	0.0	1.1	1	0	0	1	1	1	1	Transcription	initiation	factor	IID,	18kD	subunit
PALP	PF00291.25	gi|288560748|ref|YP_003424234.1|	-	2.6e-78	263.4	1.5	3e-78	263.2	1.5	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
zinc_ribbon_2	PF13240.6	gi|288560748|ref|YP_003424234.1|	-	0.0042	16.8	1.4	0.0094	15.6	1.4	1.7	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|288560748|ref|YP_003424234.1|	-	0.018	14.4	1.6	0.049	13.1	1.6	1.8	1	1	0	1	1	1	0	zinc-ribbon	domain
HypA	PF01155.19	gi|288560748|ref|YP_003424234.1|	-	0.075	13.1	0.7	0.16	12.0	0.7	1.5	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
ACP_syn_III_C	PF08541.10	gi|288560748|ref|YP_003424234.1|	-	0.087	13.0	0.2	1.1	9.5	0.0	2.7	3	0	0	3	3	3	0	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III	C	terminal
Zn-ribbon_8	PF09723.10	gi|288560748|ref|YP_003424234.1|	-	0.3	11.2	3.3	2.2	8.5	3.4	2.3	1	1	1	2	2	2	0	Zinc	ribbon	domain
C1_2	PF03107.16	gi|288560748|ref|YP_003424234.1|	-	0.44	10.9	1.7	0.76	10.1	1.7	1.4	1	0	0	1	1	1	0	C1	domain
TF_Zn_Ribbon	PF08271.12	gi|288560748|ref|YP_003424234.1|	-	1.2	8.7	6.7	8.1	6.1	6.7	2.3	1	1	0	1	1	1	0	TFIIB	zinc-binding
TFIIS_C	PF01096.18	gi|288560748|ref|YP_003424234.1|	-	9.4	6.2	7.8	39	4.2	0.5	3.2	2	1	1	3	3	3	0	Transcription	factor	S-II	(TFIIS)
SpoIIM	PF01944.17	gi|288560749|ref|YP_003424235.1|	-	3.7e-24	85.5	13.8	5.3e-24	85.0	13.8	1.2	1	0	0	1	1	1	1	Stage	II	sporulation	protein	M
DUF4512	PF14975.6	gi|288560749|ref|YP_003424235.1|	-	0.19	12.6	0.0	0.41	11.5	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4512)
DUF872	PF05915.12	gi|288560749|ref|YP_003424235.1|	-	1.3	9.2	7.2	2.4	8.3	0.0	2.5	2	1	0	2	2	2	0	Eukaryotic	protein	of	unknown	function	(DUF872)
tRNA-synt_1b	PF00579.25	gi|288560750|ref|YP_003424236.1|	-	1.4e-45	155.9	0.2	1.7e-45	155.6	0.2	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(W	and	Y)
tRNA-synt_1f	PF01921.18	gi|288560750|ref|YP_003424236.1|	-	0.088	11.7	0.0	2.1	7.2	0.0	2.2	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(K)
tRNA_int_endo	PF01974.17	gi|288560751|ref|YP_003424237.1|	-	3.6e-28	97.4	1.8	4.1e-28	97.3	1.0	1.5	2	0	0	2	2	2	1	tRNA	intron	endonuclease,	catalytic	C-terminal	domain
tRNA_int_endo_N	PF02778.14	gi|288560751|ref|YP_003424237.1|	-	2.2e-13	49.7	0.2	2.2e-13	49.7	0.2	1.7	2	0	0	2	2	2	1	tRNA	intron	endonuclease,	N-terminal	domain
tRNA_int_end_N2	PF12928.7	gi|288560751|ref|YP_003424237.1|	-	0.021	15.0	0.0	0.044	14.0	0.0	1.6	1	0	0	1	1	1	0	tRNA-splicing	endonuclease	subunit	sen54	N-term
Sen15	PF09631.10	gi|288560751|ref|YP_003424237.1|	-	0.067	13.5	0.0	0.089	13.1	0.0	1.4	1	0	0	1	1	1	0	Sen15	protein
Fe_dep_repr_C	PF02742.15	gi|288560752|ref|YP_003424238.1|	-	3.2e-27	94.4	1.0	1.8e-26	92.0	0.6	2.2	2	1	0	2	2	2	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
Fe_dep_repress	PF01325.19	gi|288560752|ref|YP_003424238.1|	-	2.2e-20	72.6	0.8	3.3e-20	72.0	0.4	1.5	2	0	0	2	2	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_24	PF13412.6	gi|288560752|ref|YP_003424238.1|	-	1.3e-06	27.8	0.0	2.8e-06	26.8	0.0	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.22	gi|288560752|ref|YP_003424238.1|	-	6.1e-05	22.9	0.0	0.00012	21.9	0.0	1.4	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.7	gi|288560752|ref|YP_003424238.1|	-	0.0002	21.2	0.0	0.00035	20.4	0.0	1.4	1	0	0	1	1	1	1	MarR	family
FeoA	PF04023.14	gi|288560752|ref|YP_003424238.1|	-	0.0022	18.2	0.0	0.021	15.0	0.0	2.2	2	0	0	2	2	2	1	FeoA	domain
B-block_TFIIIC	PF04182.12	gi|288560752|ref|YP_003424238.1|	-	0.0055	16.8	0.1	0.011	15.9	0.0	1.6	2	0	0	2	2	1	1	B-block	binding	subunit	of	TFIIIC
HTH_34	PF13601.6	gi|288560752|ref|YP_003424238.1|	-	0.011	15.9	0.2	0.56	10.4	0.0	2.4	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
HTH_5	PF01022.20	gi|288560752|ref|YP_003424238.1|	-	0.012	15.4	0.0	0.033	14.1	0.0	1.7	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.7	gi|288560752|ref|YP_003424238.1|	-	0.017	15.1	0.0	0.3	11.2	0.0	2.3	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_Crp_2	PF13545.6	gi|288560752|ref|YP_003424238.1|	-	0.021	14.8	0.0	0.041	13.9	0.0	1.4	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
HTH_IclR	PF09339.10	gi|288560752|ref|YP_003424238.1|	-	0.027	14.3	0.0	0.051	13.4	0.0	1.5	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_11	PF08279.12	gi|288560752|ref|YP_003424238.1|	-	0.044	13.7	0.0	0.1	12.5	0.0	1.6	1	0	0	1	1	1	0	HTH	domain
TFIIE_alpha	PF02002.17	gi|288560752|ref|YP_003424238.1|	-	0.057	13.3	0.1	0.21	11.4	0.1	1.9	1	1	0	1	1	1	0	TFIIE	alpha	subunit
Ribosomal_S19e	PF01090.19	gi|288560752|ref|YP_003424238.1|	-	0.073	12.8	0.0	0.11	12.2	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	protein	S19e
HTH_45	PF14947.6	gi|288560752|ref|YP_003424238.1|	-	0.094	12.7	0.2	0.23	11.5	0.2	1.7	1	1	1	2	2	2	0	Winged	helix-turn-helix
TrmB	PF01978.19	gi|288560752|ref|YP_003424238.1|	-	0.098	12.6	0.0	0.21	11.5	0.0	1.6	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_36	PF13730.6	gi|288560752|ref|YP_003424238.1|	-	0.1	12.6	0.0	0.2	11.7	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
Rrf2	PF02082.20	gi|288560752|ref|YP_003424238.1|	-	0.19	12.1	0.0	0.7	10.3	0.0	1.9	1	1	1	2	2	2	0	Transcriptional	regulator
Transglut_core	PF01841.19	gi|288560753|ref|YP_003424239.1|	-	1.9e-25	89.5	0.7	3.9e-25	88.5	0.7	1.6	1	0	0	1	1	1	1	Transglutaminase-like	superfamily
Big_1	PF02369.16	gi|288560753|ref|YP_003424239.1|	-	1.1e-16	60.5	0.2	0.00037	20.5	0.0	3.8	3	0	0	3	3	3	3	Bacterial	Ig-like	domain	(group	1)
Big_3_5	PF16640.5	gi|288560753|ref|YP_003424239.1|	-	5.3e-15	55.4	7.2	7.4e-06	26.1	0.1	3.7	4	0	0	4	4	4	3	Bacterial	Ig-like	domain	(group	3)
MG4	PF17789.1	gi|288560753|ref|YP_003424239.1|	-	3.9e-09	36.5	0.0	0.064	13.4	0.0	3.7	3	0	0	3	3	3	3	Macroglobulin	domain	MG4
Invasin_D3	PF09134.10	gi|288560753|ref|YP_003424239.1|	-	5.8e-06	26.5	2.7	0.29	11.5	0.0	4.0	4	0	0	4	4	4	2	Invasin,	domain	3
Peptidase_C71	PF12386.8	gi|288560753|ref|YP_003424239.1|	-	3.2e-05	23.6	3.0	8.4e-05	22.2	3.0	1.7	1	0	0	1	1	1	1	Pseudomurein	endo-isopeptidase	Pei
DUF4198	PF10670.9	gi|288560753|ref|YP_003424239.1|	-	5.5e-05	23.6	0.0	0.0055	17.1	0.0	3.2	3	1	1	4	4	4	1	Domain	of	unknown	function	(DUF4198)
DUF553	PF04473.12	gi|288560753|ref|YP_003424239.1|	-	0.0012	18.4	0.8	0.069	12.7	0.8	2.4	1	1	0	1	1	1	1	Transglutaminase-like	domain
YtkA	PF13115.6	gi|288560753|ref|YP_003424239.1|	-	0.023	15.3	0.0	20	5.8	0.0	3.1	3	1	0	3	3	3	0	YtkA-like
Transglut_core	PF01841.19	gi|288560755|ref|YP_003424241.1|	-	5.7e-21	75.1	0.2	1.4e-20	73.8	0.2	1.8	1	0	0	1	1	1	1	Transglutaminase-like	superfamily
Big_3_5	PF16640.5	gi|288560755|ref|YP_003424241.1|	-	4.3e-20	71.7	53.5	8.6e-08	32.3	6.9	7.6	8	1	0	8	8	8	4	Bacterial	Ig-like	domain	(group	3)
PMBR	PF09373.10	gi|288560755|ref|YP_003424241.1|	-	7.9e-16	57.4	19.1	0.0022	18.1	0.8	7.7	7	0	0	7	7	7	5	Pseudomurein-binding	repeat
Big_1	PF02369.16	gi|288560755|ref|YP_003424241.1|	-	2.4e-15	56.3	49.9	3.5e-06	26.9	1.1	7.9	7	1	0	7	7	7	4	Bacterial	Ig-like	domain	(group	1)
MG4	PF17789.1	gi|288560755|ref|YP_003424241.1|	-	5.3e-15	55.3	10.8	0.0052	16.9	0.3	5.7	4	1	1	5	5	5	4	Macroglobulin	domain	MG4
CarboxypepD_reg	PF13620.6	gi|288560755|ref|YP_003424241.1|	-	8.7e-14	51.6	25.0	0.00068	19.9	1.7	5.7	5	0	0	5	5	5	4	Carboxypeptidase	regulatory-like	domain
DUF824	PF05688.11	gi|288560755|ref|YP_003424241.1|	-	0.0048	16.7	2.6	2.8	7.8	0.0	4.8	5	0	0	5	5	5	1	Salmonella	repeat	of	unknown	function	(DUF824)
Wzt_C	PF14524.6	gi|288560755|ref|YP_003424241.1|	-	0.16	12.0	8.1	0.56	10.2	0.1	3.5	4	0	0	4	4	4	0	Wzt	C-terminal	domain
Big_3_5	PF16640.5	gi|288560756|ref|YP_003424242.1|	-	1.1e-31	108.8	61.2	7.3e-12	45.3	9.5	8.9	9	0	0	9	9	9	7	Bacterial	Ig-like	domain	(group	3)
CarboxypepD_reg	PF13620.6	gi|288560756|ref|YP_003424242.1|	-	4.8e-19	68.4	29.3	2.4e-05	24.5	0.2	8.5	7	1	1	8	8	8	5	Carboxypeptidase	regulatory-like	domain
Big_1	PF02369.16	gi|288560756|ref|YP_003424242.1|	-	1.2e-18	66.9	41.0	2.4e-05	24.2	3.6	8.9	8	1	0	8	8	8	5	Bacterial	Ig-like	domain	(group	1)
MG4	PF17789.1	gi|288560756|ref|YP_003424242.1|	-	1.1e-13	51.1	8.7	0.037	14.2	0.0	7.1	7	1	1	8	8	8	4	Macroglobulin	domain	MG4
fn3_3	PF14686.6	gi|288560756|ref|YP_003424242.1|	-	8.5e-07	28.7	19.2	0.04	13.7	0.5	6.3	6	1	0	6	6	6	3	Polysaccharide	lyase	family	4,	domain	II
bMG3	PF11974.8	gi|288560756|ref|YP_003424242.1|	-	9.9e-07	28.7	3.2	4.7	7.3	0.0	6.9	7	0	0	7	7	7	1	Bacterial	alpha-2-macroglobulin	MG3	domain
Invasin_D3	PF09134.10	gi|288560756|ref|YP_003424242.1|	-	3e-06	27.5	49.1	0.0013	19.0	7.8	7.6	6	1	1	7	7	7	4	Invasin,	domain	3
DUF4198	PF10670.9	gi|288560756|ref|YP_003424242.1|	-	0.02	15.3	6.5	7.2	6.9	0.1	5.5	5	1	1	6	6	6	0	Domain	of	unknown	function	(DUF4198)
ig	PF00047.25	gi|288560756|ref|YP_003424242.1|	-	0.051	13.8	1.8	3.7	7.8	0.1	3.2	2	1	1	3	3	3	0	Immunoglobulin	domain
DUF4458	PF14660.6	gi|288560756|ref|YP_003424242.1|	-	0.43	10.8	7.6	0.88	9.8	0.2	3.5	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4458)
Cupredoxin_1	PF13473.6	gi|288560756|ref|YP_003424242.1|	-	0.49	10.5	3.7	11	6.2	0.0	4.2	3	1	1	4	4	4	0	Cupredoxin-like	domain
CS	PF04969.16	gi|288560756|ref|YP_003424242.1|	-	0.7	11.0	2.5	16	6.6	0.3	2.9	2	0	0	2	2	2	0	CS	domain
Filamin	PF00630.19	gi|288560756|ref|YP_003424242.1|	-	2.9	8.8	8.5	3.8	8.4	0.4	4.1	4	1	0	4	4	4	0	Filamin/ABP280	repeat
Cpn60_TCP1	PF00118.24	gi|288560757|ref|YP_003424243.1|	-	5.3e-165	549.8	12.7	6.7e-165	549.4	12.7	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
LCM	PF04072.14	gi|288560758|ref|YP_003424244.1|	-	8.2e-14	52.0	0.0	1.3e-13	51.3	0.0	1.3	1	0	0	1	1	1	1	Leucine	carboxyl	methyltransferase
YpjP	PF14005.6	gi|288560759|ref|YP_003424245.1|	-	0.13	12.3	0.0	0.2	11.7	0.0	1.2	1	0	0	1	1	1	0	YpjP-like	protein
Peptidase_M48	PF01435.18	gi|288560760|ref|YP_003424246.1|	-	5.8e-25	88.2	0.0	8.1e-25	87.7	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	M48
zinc_ribbon_2	PF13240.6	gi|288560760|ref|YP_003424246.1|	-	4.6e-08	32.5	4.7	9.6e-08	31.5	4.7	1.6	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|288560760|ref|YP_003424246.1|	-	8.1e-07	28.2	3.1	1.4e-06	27.5	3.1	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|288560760|ref|YP_003424246.1|	-	1.5e-05	25.0	2.3	2.7e-05	24.1	2.3	1.4	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_15	PF17032.5	gi|288560760|ref|YP_003424246.1|	-	0.00015	22.5	1.0	0.00028	21.6	1.0	1.4	1	0	0	1	1	1	1	zinc-ribbon	family
Peptidase_M78	PF06114.13	gi|288560760|ref|YP_003424246.1|	-	0.00097	19.1	0.0	0.0018	18.2	0.0	1.4	1	0	0	1	1	1	1	IrrE	N-terminal-like	domain
Peptidase_U49	PF10463.9	gi|288560760|ref|YP_003424246.1|	-	0.0081	15.9	0.0	0.04	13.7	0.0	1.9	2	0	0	2	2	2	1	Peptidase	U49
SprT-like	PF10263.9	gi|288560760|ref|YP_003424246.1|	-	0.03	14.2	0.0	0.053	13.4	0.0	1.5	1	0	0	1	1	1	0	SprT-like	family
DUF2201_N	PF13203.6	gi|288560760|ref|YP_003424246.1|	-	0.036	13.7	0.2	0.072	12.7	0.0	1.4	2	0	0	2	2	2	0	Putative	metallopeptidase	domain
Nudix_N_2	PF14803.6	gi|288560760|ref|YP_003424246.1|	-	0.058	13.3	3.7	3.5	7.6	0.2	2.4	2	0	0	2	2	2	0	Nudix	N-terminal
Kelch_2	PF07646.15	gi|288560760|ref|YP_003424246.1|	-	0.1	12.6	0.0	0.21	11.6	0.0	1.5	1	0	0	1	1	1	0	Kelch	motif
Peptidase_M91	PF14891.6	gi|288560760|ref|YP_003424246.1|	-	0.1	12.9	0.0	0.17	12.2	0.0	1.4	1	0	0	1	1	1	0	Effector	protein
DUF35_N	PF12172.8	gi|288560760|ref|YP_003424246.1|	-	0.12	12.3	0.8	0.22	11.4	0.8	1.5	1	0	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
TF_Zn_Ribbon	PF08271.12	gi|288560760|ref|YP_003424246.1|	-	0.49	10.0	4.0	3.3	7.3	4.1	2.1	1	1	1	2	2	2	0	TFIIB	zinc-binding
DUF11	PF01345.18	gi|288560762|ref|YP_003424248.1|	-	1.5e-12	47.6	0.1	2.9e-12	46.7	0.1	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF11
DUF824	PF05688.11	gi|288560762|ref|YP_003424248.1|	-	0.0029	17.4	0.6	0.0029	17.4	0.6	1.9	2	0	0	2	2	2	1	Salmonella	repeat	of	unknown	function	(DUF824)
bMG10	PF17973.1	gi|288560762|ref|YP_003424248.1|	-	0.0048	17.1	0.1	0.01	16.0	0.1	1.6	1	1	0	1	1	1	1	Bacterial	Alpha-2-macroglobulin	MG10	domain
CobT	PF06213.12	gi|288560762|ref|YP_003424248.1|	-	6.4	6.1	9.4	10	5.4	9.4	1.2	1	0	0	1	1	1	0	Cobalamin	biosynthesis	protein	CobT
Flavodoxin_1	PF00258.25	gi|288560763|ref|YP_003424249.1|	-	1.6e-13	51.1	0.0	3.8e-13	49.9	0.0	1.6	2	0	0	2	2	2	1	Flavodoxin
Lactamase_B	PF00753.27	gi|288560763|ref|YP_003424249.1|	-	1.6e-12	47.9	0.0	2.8e-12	47.0	0.0	1.4	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Abhydrolase_1	PF00561.20	gi|288560764|ref|YP_003424250.1|	-	5.7e-06	26.2	0.0	0.021	14.5	0.0	2.1	1	1	1	2	2	2	2	alpha/beta	hydrolase	fold
Hydrolase_4	PF12146.8	gi|288560764|ref|YP_003424250.1|	-	0.0091	15.3	0.0	0.015	14.6	0.0	1.4	1	1	0	1	1	1	1	Serine	aminopeptidase,	S33
FSH1	PF03959.13	gi|288560764|ref|YP_003424250.1|	-	0.018	14.7	0.1	2.1	8.0	0.0	2.2	1	1	0	2	2	2	0	Serine	hydrolase	(FSH1)
Abhydrolase_6	PF12697.7	gi|288560764|ref|YP_003424250.1|	-	0.16	12.6	0.0	0.21	12.2	0.0	1.3	1	0	0	1	1	1	0	Alpha/beta	hydrolase	family
P5CR_dimer	PF14748.6	gi|288560765|ref|YP_003424251.1|	-	2.8e-16	59.7	0.0	4.4e-16	59.0	0.0	1.3	1	0	0	1	1	1	1	Pyrroline-5-carboxylate	reductase	dimerisation
F420_oxidored	PF03807.17	gi|288560765|ref|YP_003424251.1|	-	4.4e-15	56.0	0.0	9.8e-15	54.9	0.0	1.6	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_2	PF03446.15	gi|288560765|ref|YP_003424251.1|	-	2.7e-10	40.6	0.0	5.5e-10	39.6	0.0	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.23	gi|288560765|ref|YP_003424251.1|	-	1.2e-05	25.3	0.1	3.1e-05	24.0	0.1	1.8	1	1	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Shikimate_DH	PF01488.20	gi|288560765|ref|YP_003424251.1|	-	3.8e-05	23.8	0.1	7e-05	22.9	0.1	1.4	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
ApbA	PF02558.16	gi|288560765|ref|YP_003424251.1|	-	0.00018	21.2	0.0	0.00037	20.2	0.0	1.5	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
Sacchrp_dh_NADP	PF03435.18	gi|288560765|ref|YP_003424251.1|	-	0.025	14.8	0.0	0.048	13.9	0.0	1.5	1	0	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
3HCDH_N	PF02737.18	gi|288560765|ref|YP_003424251.1|	-	0.039	13.8	0.0	0.11	12.4	0.0	1.9	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
GFO_IDH_MocA	PF01408.22	gi|288560765|ref|YP_003424251.1|	-	0.1	13.4	0.0	0.3	11.9	0.0	1.7	2	0	0	2	2	2	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
NRho	PF16733.5	gi|288560765|ref|YP_003424251.1|	-	0.13	12.4	0.0	0.27	11.3	0.0	1.5	1	0	0	1	1	1	0	Rhomboid	N-terminal	domain
Wx5_PLAF3D7	PF09688.10	gi|288560765|ref|YP_003424251.1|	-	0.13	12.3	4.5	0.092	12.7	0.5	2.4	2	1	0	2	2	2	0	Protein	of	unknown	function	(Wx5_PLAF3D7)
IlvN	PF07991.12	gi|288560765|ref|YP_003424251.1|	-	0.14	11.8	0.0	0.33	10.5	0.0	1.7	1	1	0	1	1	1	0	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
ABC2_membrane_3	PF12698.7	gi|288560766|ref|YP_003424252.1|	-	1.2e-21	77.3	43.2	5.3e-17	62.0	43.2	2.6	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane	PF01061.24	gi|288560766|ref|YP_003424252.1|	-	3.3e-06	26.7	14.9	3.3e-06	26.7	14.9	2.3	1	1	1	2	2	2	1	ABC-2	type	transporter
DUF3533	PF12051.8	gi|288560766|ref|YP_003424252.1|	-	0.0001	21.4	0.4	0.0001	21.4	0.4	3.1	2	1	1	3	3	3	2	Protein	of	unknown	function	(DUF3533)
MCPsignal	PF00015.21	gi|288560766|ref|YP_003424252.1|	-	0.0058	16.5	15.5	0.0059	16.4	7.2	2.6	1	1	1	2	2	2	2	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
Spc7	PF08317.11	gi|288560766|ref|YP_003424252.1|	-	0.0074	15.2	2.9	0.015	14.2	2.6	1.5	1	1	0	1	1	1	1	Spc7	kinetochore	protein
Tet_res_leader	PF08050.12	gi|288560766|ref|YP_003424252.1|	-	0.021	14.6	3.6	7.2	6.5	0.2	4.4	2	2	1	4	4	4	0	Tetracycline	resistance	leader	peptide
CALCOCO1	PF07888.11	gi|288560766|ref|YP_003424252.1|	-	0.051	12.4	5.0	0.085	11.7	4.9	1.3	1	1	0	1	1	1	0	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
TMPIT	PF07851.13	gi|288560766|ref|YP_003424252.1|	-	0.22	10.7	2.6	0.55	9.4	2.6	1.7	1	0	0	1	1	1	0	TMPIT-like	protein
ATP11	PF06644.11	gi|288560766|ref|YP_003424252.1|	-	0.3	10.8	3.8	0.47	10.2	3.8	1.2	1	0	0	1	1	1	0	ATP11	protein
DUF4088	PF13317.6	gi|288560766|ref|YP_003424252.1|	-	0.84	9.1	5.4	6.4	6.3	0.9	3.0	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF4088)
Mod_r	PF07200.13	gi|288560766|ref|YP_003424252.1|	-	1.3	9.1	4.2	3.3	7.8	4.2	1.7	1	1	0	1	1	1	0	Modifier	of	rudimentary	(Mod(r))	protein
DUF3540	PF12059.8	gi|288560766|ref|YP_003424252.1|	-	1.5	8.6	18.7	1.1	9.1	5.4	3.1	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF3540)
Big_3_5	PF16640.5	gi|288560766|ref|YP_003424252.1|	-	2.6	8.3	15.5	1.9	8.8	1.7	4.2	3	2	0	3	3	2	0	Bacterial	Ig-like	domain	(group	3)
Filament	PF00038.21	gi|288560766|ref|YP_003424252.1|	-	2.8	7.4	5.7	8.7	5.8	2.1	1.8	1	1	1	2	2	2	0	Intermediate	filament	protein
MscS_porin	PF12795.7	gi|288560766|ref|YP_003424252.1|	-	8.6	5.8	14.3	2.7	7.5	7.6	2.3	1	1	1	2	2	2	0	Mechanosensitive	ion	channel	porin	domain
NAC	PF01849.18	gi|288560767|ref|YP_003424253.1|	-	1.6e-17	63.2	2.5	2.7e-17	62.5	2.5	1.3	1	0	0	1	1	1	1	NAC	domain
Robl_LC7	PF03259.17	gi|288560767|ref|YP_003424253.1|	-	0.00045	19.9	0.7	0.045	13.5	0.1	2.1	2	0	0	2	2	2	2	Roadblock/LC7	domain
UBA_4	PF14555.6	gi|288560767|ref|YP_003424253.1|	-	0.11	12.4	0.1	0.2	11.5	0.1	1.5	1	0	0	1	1	1	0	UBA-like	domain
TGT	PF01702.18	gi|288560768|ref|YP_003424254.1|	-	4.1e-82	276.1	0.4	6.7e-82	275.4	0.1	1.4	2	0	0	2	2	2	1	Queuine	tRNA-ribosyltransferase
TGT_C2	PF14810.6	gi|288560768|ref|YP_003424254.1|	-	4.9e-23	81.0	0.1	1.4e-22	79.6	0.1	1.7	1	0	0	1	1	1	1	Patch-forming	domain	C2	of	tRNA-guanine	transglycosylase
PUA	PF01472.20	gi|288560768|ref|YP_003424254.1|	-	7.4e-16	57.9	0.0	2e-15	56.5	0.0	1.8	1	0	0	1	1	1	1	PUA	domain
DUF5591	PF17884.1	gi|288560768|ref|YP_003424254.1|	-	5.2e-06	26.4	0.1	1.4e-05	25.0	0.1	1.8	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF5591)
UPF0113	PF03657.13	gi|288560768|ref|YP_003424254.1|	-	6.3e-05	23.2	0.1	0.00036	20.7	0.0	2.4	2	0	0	2	2	2	1	UPF0113	PUA	domain
Big_1	PF02369.16	gi|288560769|ref|YP_003424255.1|	-	4.7e-12	45.7	9.1	2.8e-07	30.4	3.0	4.1	3	1	1	4	4	4	2	Bacterial	Ig-like	domain	(group	1)
Big_3_5	PF16640.5	gi|288560769|ref|YP_003424255.1|	-	1.5e-08	34.7	12.8	5.3e-08	32.9	4.7	3.6	3	1	0	3	3	3	1	Bacterial	Ig-like	domain	(group	3)
MG4	PF17789.1	gi|288560769|ref|YP_003424255.1|	-	9.4e-07	28.9	2.4	0.025	14.7	0.0	3.3	3	1	0	3	3	3	2	Macroglobulin	domain	MG4
Invasin_D3	PF09134.10	gi|288560769|ref|YP_003424255.1|	-	2.1e-06	27.9	11.9	0.0001	22.5	3.6	3.5	3	1	0	3	3	3	2	Invasin,	domain	3
CarboxypepD_reg	PF13620.6	gi|288560769|ref|YP_003424255.1|	-	3.9e-05	23.8	1.6	0.034	14.4	1.1	2.6	2	0	0	2	2	2	2	Carboxypeptidase	regulatory-like	domain
bMG3	PF11974.8	gi|288560769|ref|YP_003424255.1|	-	0.038	14.0	0.3	0.65	10.1	0.1	2.4	1	1	1	2	2	2	0	Bacterial	alpha-2-macroglobulin	MG3	domain
MCPVI	PF02993.14	gi|288560769|ref|YP_003424255.1|	-	0.32	10.8	1.6	0.54	10.1	1.6	1.3	1	0	0	1	1	1	0	Minor	capsid	protein	VI
Pilin	PF00114.19	gi|288560769|ref|YP_003424255.1|	-	0.38	11.7	10.2	0.13	13.2	0.8	3.6	3	0	0	3	3	3	0	Pilin	(bacterial	filament)
Methyltransf_30	PF05430.11	gi|288560770|ref|YP_003424256.1|	-	2e-21	76.1	0.0	3.3e-21	75.4	0.0	1.4	1	0	0	1	1	1	1	S-adenosyl-L-methionine-dependent	methyltransferase
Spermine_synth	PF01564.17	gi|288560770|ref|YP_003424256.1|	-	0.0066	15.9	0.3	0.015	14.7	0.1	1.7	2	0	0	2	2	2	1	Spermine/spermidine	synthase	domain
Methyltransf_11	PF08241.12	gi|288560770|ref|YP_003424256.1|	-	0.016	15.9	0.0	0.04	14.6	0.0	1.7	1	0	0	1	1	1	0	Methyltransferase	domain
TAP42	PF04177.12	gi|288560771|ref|YP_003424257.1|	-	0.057	12.5	0.1	0.076	12.1	0.1	1.1	1	0	0	1	1	1	0	TAP42-like	family
Suv3_N	PF18114.1	gi|288560771|ref|YP_003424257.1|	-	0.062	13.4	0.6	0.17	12.0	0.1	1.9	2	1	1	3	3	3	0	Suv3	helical	N-terminal	domain
PIN	PF01850.21	gi|288560773|ref|YP_003424259.1|	-	0.04	14.4	0.1	0.045	14.3	0.1	1.2	1	0	0	1	1	1	0	PIN	domain
Bac_DNA_binding	PF00216.21	gi|288560773|ref|YP_003424259.1|	-	0.12	12.6	0.0	0.17	12.1	0.0	1.3	1	0	0	1	1	1	0	Bacterial	DNA-binding	protein
T6PP_N	PF18572.1	gi|288560774|ref|YP_003424260.1|	-	0.008	16.0	2.5	0.008	16.0	2.5	1.7	2	0	0	2	2	2	1	Trehalose-6-phosphate	phosphatase	N-terminal	helical	bundle	domain
PFL-like	PF02901.15	gi|288560775|ref|YP_003424261.1|	-	6.1e-43	147.4	0.0	2.5e-20	72.7	0.0	2.9	2	1	0	2	2	2	2	Pyruvate	formate	lyase-like
Methyltransf_23	PF13489.6	gi|288560776|ref|YP_003424262.1|	-	1.3e-22	80.4	0.0	1.7e-22	80.0	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|288560776|ref|YP_003424262.1|	-	1.7e-10	41.4	0.0	4.3e-10	40.1	0.0	1.7	2	0	0	2	2	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|288560776|ref|YP_003424262.1|	-	2e-09	38.0	0.1	1.3e-08	35.4	0.1	2.1	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|288560776|ref|YP_003424262.1|	-	2.1e-08	34.1	1.7	5.8e-07	29.4	1.7	2.3	1	1	0	1	1	1	1	Methyltransferase	domain
MetW	PF07021.12	gi|288560776|ref|YP_003424262.1|	-	4e-08	33.1	0.2	2.5e-05	24.0	0.0	2.1	2	0	0	2	2	2	2	Methionine	biosynthesis	protein	MetW
Methyltransf_12	PF08242.12	gi|288560776|ref|YP_003424262.1|	-	9e-08	32.8	0.5	2.1e-06	28.4	0.5	2.4	1	1	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.20	gi|288560776|ref|YP_003424262.1|	-	0.00016	21.1	0.0	0.0004	19.8	0.0	1.7	1	1	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_9	PF08003.11	gi|288560776|ref|YP_003424262.1|	-	0.0016	17.4	0.0	0.012	14.5	0.0	2.2	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF1698)
MTS	PF05175.14	gi|288560776|ref|YP_003424262.1|	-	0.006	16.2	0.4	0.12	11.9	0.4	2.2	1	1	0	1	1	1	1	Methyltransferase	small	domain
AdoMet_MTase	PF07757.13	gi|288560776|ref|YP_003424262.1|	-	0.013	15.8	0.0	0.029	14.7	0.0	1.6	1	0	0	1	1	1	0	Predicted	AdoMet-dependent	methyltransferase
TehB	PF03848.14	gi|288560776|ref|YP_003424262.1|	-	0.017	14.5	0.3	0.036	13.5	0.3	1.6	1	1	0	1	1	1	0	Tellurite	resistance	protein	TehB
NodS	PF05401.11	gi|288560776|ref|YP_003424262.1|	-	0.03	13.9	0.0	0.053	13.1	0.0	1.4	1	0	0	1	1	1	0	Nodulation	protein	S	(NodS)
Pox_MCEL	PF03291.16	gi|288560776|ref|YP_003424262.1|	-	0.044	12.9	0.0	0.069	12.2	0.0	1.5	1	0	0	1	1	1	0	mRNA	capping	enzyme
GidB	PF02527.15	gi|288560776|ref|YP_003424262.1|	-	0.06	12.7	0.9	1.2	8.4	0.0	2.5	3	0	0	3	3	3	0	rRNA	small	subunit	methyltransferase	G
TIR	PF01582.20	gi|288560776|ref|YP_003424262.1|	-	0.086	12.6	0.0	0.99	9.2	0.0	2.2	2	0	0	2	2	2	0	TIR	domain
Lar_restr_allev	PF14354.6	gi|288560777|ref|YP_003424263.1|	-	0.096	13.1	1.7	0.23	11.8	1.7	1.6	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
zf-C2H2_3	PF13878.6	gi|288560777|ref|YP_003424263.1|	-	0.21	11.4	1.4	0.52	10.2	0.1	2.0	2	0	0	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
Sgf11	PF08209.11	gi|288560777|ref|YP_003424263.1|	-	5	6.8	6.7	9.5	5.9	0.4	3.0	3	0	0	3	3	3	0	Sgf11	(transcriptional	regulation	protein)
Polysacc_synt_C	PF14667.6	gi|288560778|ref|YP_003424264.1|	-	1.8e-11	44.3	1.5	2e-11	44.1	1.5	1.0	1	0	0	1	1	1	1	Polysaccharide	biosynthesis	C-terminal	domain
Polysacc_synt_3	PF13440.6	gi|288560779|ref|YP_003424265.1|	-	0.002	17.4	0.1	0.0021	17.3	0.1	1.1	1	0	0	1	1	1	1	Polysaccharide	biosynthesis	protein
Polysacc_synt	PF01943.17	gi|288560780|ref|YP_003424266.1|	-	7.3e-42	143.6	68.2	3.9e-41	141.3	42.4	2.1	2	0	0	2	2	2	2	Polysaccharide	biosynthesis	protein
Polysacc_synt_C	PF14667.6	gi|288560780|ref|YP_003424266.1|	-	3.6e-25	88.7	15.8	3.6e-25	88.7	15.8	4.0	2	1	1	3	3	3	2	Polysaccharide	biosynthesis	C-terminal	domain
Polysacc_synt_3	PF13440.6	gi|288560780|ref|YP_003424266.1|	-	1.8e-24	86.5	28.6	1.8e-24	86.5	28.6	2.5	1	1	2	3	3	3	1	Polysaccharide	biosynthesis	protein
MurJ	PF03023.14	gi|288560780|ref|YP_003424266.1|	-	1.9e-13	49.9	46.4	1.9e-13	49.9	46.4	2.0	1	1	1	2	2	2	1	Lipid	II	flippase	MurJ
MatE	PF01554.18	gi|288560780|ref|YP_003424266.1|	-	3.8e-12	46.2	51.0	1e-10	41.5	14.4	3.7	3	2	0	3	3	3	2	MatE
Glyco_tranf_2_5	PF13712.6	gi|288560781|ref|YP_003424267.1|	-	8.5e-19	68.1	2.5	3.8e-18	65.9	2.3	1.9	1	1	0	1	1	1	1	Glycosyltransferase	like	family
Glycos_transf_2	PF00535.26	gi|288560781|ref|YP_003424267.1|	-	8.2e-08	32.2	0.8	0.00069	19.5	0.0	2.3	1	1	1	2	2	2	2	Glycosyl	transferase	family	2
Phage_portal	PF04860.12	gi|288560781|ref|YP_003424267.1|	-	0.0019	17.4	0.1	0.0029	16.9	0.1	1.2	1	0	0	1	1	1	1	Phage	portal	protein
DUF727	PF05303.12	gi|288560781|ref|YP_003424267.1|	-	0.0034	17.4	0.1	0.0096	16.0	0.1	1.7	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF727)
Glyco_tranf_2_3	PF13641.6	gi|288560781|ref|YP_003424267.1|	-	0.081	12.8	0.0	0.31	10.9	0.0	2.0	1	1	0	1	1	1	0	Glycosyltransferase	like	family	2
Maf	PF02545.14	gi|288560781|ref|YP_003424267.1|	-	0.15	11.9	0.0	0.23	11.3	0.0	1.3	1	0	0	1	1	1	0	Maf-like	protein
NTP_transferase	PF00483.23	gi|288560782|ref|YP_003424268.1|	-	1.5e-29	103.3	0.0	2.2e-29	102.8	0.0	1.2	1	0	0	1	1	1	1	Nucleotidyl	transferase
MannoseP_isomer	PF01050.18	gi|288560782|ref|YP_003424268.1|	-	9.1e-09	35.4	0.1	1.8e-08	34.4	0.1	1.5	1	0	0	1	1	1	1	Mannose-6-phosphate	isomerase
Cupin_2	PF07883.11	gi|288560782|ref|YP_003424268.1|	-	1.1e-08	34.6	0.1	2.5e-08	33.5	0.1	1.6	1	0	0	1	1	1	1	Cupin	domain
NTP_transf_3	PF12804.7	gi|288560782|ref|YP_003424268.1|	-	1.6e-07	31.8	0.0	2.1e-07	31.4	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
AraC_binding	PF02311.19	gi|288560782|ref|YP_003424268.1|	-	0.0048	16.8	0.0	0.01	15.7	0.0	1.5	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
Ectoine_synth	PF06339.12	gi|288560782|ref|YP_003424268.1|	-	0.0096	16.1	0.4	0.015	15.5	0.4	1.3	1	0	0	1	1	1	1	Ectoine	synthase
Cupin_1	PF00190.22	gi|288560782|ref|YP_003424268.1|	-	0.038	13.6	0.0	0.071	12.7	0.0	1.4	1	0	0	1	1	1	0	Cupin
Cupin_3	PF05899.12	gi|288560782|ref|YP_003424268.1|	-	0.12	12.0	0.0	0.46	10.2	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF861)
FucT_N	PF18025.1	gi|288560783|ref|YP_003424269.1|	-	6e-28	97.1	5.9	6e-28	97.1	5.9	2.3	2	0	0	2	2	2	1	Alpha-(1,3)-fucosyltransferase	FucT	N-terminal	domain
Glyco_transf_10	PF00852.19	gi|288560783|ref|YP_003424269.1|	-	3.5e-19	69.2	0.0	9e-19	67.9	0.0	1.6	1	1	0	1	1	1	1	Glycosyltransferase	family	10	(fucosyltransferase)	C-term
Glyco_trans_1_2	PF13524.6	gi|288560783|ref|YP_003424269.1|	-	0.0033	17.8	0.1	0.006	16.9	0.1	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Exostosin	PF03016.15	gi|288560783|ref|YP_003424269.1|	-	0.068	12.4	0.0	0.11	11.7	0.0	1.3	1	0	0	1	1	1	0	Exostosin	family
DUF4422	PF14393.6	gi|288560784|ref|YP_003424270.1|	-	6.3e-80	268.3	1.2	1.1e-79	267.5	1.2	1.4	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4422)
GLF	PF03275.13	gi|288560785|ref|YP_003424271.1|	-	7.4e-86	287.1	3.7	7.4e-86	287.1	3.7	1.5	2	0	0	2	2	2	1	UDP-galactopyranose	mutase
NAD_binding_8	PF13450.6	gi|288560785|ref|YP_003424271.1|	-	6.1e-20	71.2	0.0	1.2e-19	70.3	0.0	1.5	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Amino_oxidase	PF01593.24	gi|288560785|ref|YP_003424271.1|	-	8.4e-09	35.2	0.0	1.5e-08	34.4	0.0	1.5	2	0	0	2	2	2	1	Flavin	containing	amine	oxidoreductase
FAD_binding_2	PF00890.24	gi|288560785|ref|YP_003424271.1|	-	1.3e-06	27.8	0.0	0.00055	19.1	0.0	2.1	1	1	1	2	2	2	2	FAD	binding	domain
FAD_oxidored	PF12831.7	gi|288560785|ref|YP_003424271.1|	-	0.00026	20.5	0.0	0.00053	19.5	0.0	1.5	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
DAO	PF01266.24	gi|288560785|ref|YP_003424271.1|	-	0.00043	20.0	0.0	0.00085	19.0	0.0	1.6	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
FAD_binding_3	PF01494.19	gi|288560785|ref|YP_003424271.1|	-	0.0017	17.7	0.0	0.0027	17.0	0.0	1.3	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox	PF00070.27	gi|288560785|ref|YP_003424271.1|	-	0.0046	17.5	0.0	0.013	16.0	0.0	1.8	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.14	gi|288560785|ref|YP_003424271.1|	-	0.014	14.6	0.0	0.077	12.2	0.0	1.9	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Phage_int_SAM_5	PF13102.6	gi|288560786|ref|YP_003424272.1|	-	0.036	14.4	0.4	0.041	14.2	0.4	1.2	1	0	0	1	1	1	0	Phage	integrase	SAM-like	domain
DUF4065	PF13274.6	gi|288560788|ref|YP_003424274.1|	-	0.87	10.5	7.8	0.15	12.9	3.0	2.2	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF4065)
PIN	PF01850.21	gi|288560789|ref|YP_003424275.1|	-	0.1	13.1	0.3	1	9.9	0.2	2.1	2	0	0	2	2	2	0	PIN	domain
Acyl_transf_3	PF01757.22	gi|288560790|ref|YP_003424276.1|	-	3.9e-25	88.6	29.0	4.7e-25	88.4	29.0	1.0	1	0	0	1	1	1	1	Acyltransferase	family
DUF3671	PF12420.8	gi|288560790|ref|YP_003424276.1|	-	0.0051	16.9	1.9	0.0051	16.9	1.9	3.1	2	1	1	3	3	3	1	Protein	of	unknown	function
DUF4519	PF15012.6	gi|288560790|ref|YP_003424276.1|	-	0.032	14.4	0.2	0.14	12.3	0.2	2.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4519)
SHR3_chaperone	PF08229.11	gi|288560790|ref|YP_003424276.1|	-	3.4	6.6	13.9	1.2	8.1	1.3	2.5	1	1	0	2	2	2	0	ER	membrane	protein	SH3
Acyl_transf_3	PF01757.22	gi|288560791|ref|YP_003424277.1|	-	0.00024	20.3	3.5	0.00028	20.1	3.5	1.0	1	0	0	1	1	1	1	Acyltransferase	family
DUF3671	PF12420.8	gi|288560791|ref|YP_003424277.1|	-	0.17	12.0	5.3	1.5	8.9	0.4	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function
SIS	PF01380.22	gi|288560792|ref|YP_003424278.1|	-	1.7e-56	189.7	0.4	7.3e-27	93.8	0.9	2.6	2	0	0	2	2	2	2	SIS	domain
GATase_6	PF13522.6	gi|288560792|ref|YP_003424278.1|	-	1.4e-21	77.1	0.0	2.5e-21	76.3	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_7	PF13537.6	gi|288560792|ref|YP_003424278.1|	-	2.3e-16	59.8	0.0	5.5e-16	58.6	0.0	1.7	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_4	PF13230.6	gi|288560792|ref|YP_003424278.1|	-	3.3e-05	22.9	0.0	5.3e-05	22.2	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
DUF5603	PF18231.1	gi|288560792|ref|YP_003424278.1|	-	0.051	13.9	2.6	0.46	10.8	0.4	3.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF5603)
Dynactin_p22	PF07426.11	gi|288560792|ref|YP_003424278.1|	-	0.072	12.9	0.5	1.4	8.8	0.1	2.3	2	0	0	2	2	2	0	Dynactin	subunit	p22
FeoB_Cyto	PF17910.1	gi|288560792|ref|YP_003424278.1|	-	0.28	11.7	1.9	29	5.3	0.2	2.6	2	0	0	2	2	2	0	FeoB	cytosolic	helical	domain
HTH_23	PF13384.6	gi|288560793|ref|YP_003424279.1|	-	0.0017	18.1	0.0	0.0038	17.0	0.0	1.6	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_7	PF02796.15	gi|288560793|ref|YP_003424279.1|	-	0.014	15.4	0.0	0.053	13.6	0.0	2.0	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	resolvase
DUF4822	PF16103.5	gi|288560793|ref|YP_003424279.1|	-	0.2	11.9	8.1	0.14	12.5	2.2	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4822)
SAICAR_synt	PF01259.18	gi|288560794|ref|YP_003424280.1|	-	9e-59	199.1	0.1	1.1e-58	198.9	0.1	1.1	1	0	0	1	1	1	1	SAICAR	synthetase
PurS	PF02700.14	gi|288560795|ref|YP_003424281.1|	-	5.7e-25	87.3	0.1	6.5e-25	87.1	0.1	1.0	1	0	0	1	1	1	1	Phosphoribosylformylglycinamidine	(FGAM)	synthase
GATase_5	PF13507.6	gi|288560796|ref|YP_003424282.1|	-	7.8e-44	149.7	0.0	1.1e-43	149.2	0.0	1.2	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
DJ-1_PfpI	PF01965.24	gi|288560796|ref|YP_003424282.1|	-	1.4e-09	38.0	0.0	2.9e-09	37.0	0.0	1.4	1	1	0	1	1	1	1	DJ-1/PfpI	family
GATase_3	PF07685.14	gi|288560796|ref|YP_003424282.1|	-	1.9e-09	37.4	0.0	7.1e-08	32.3	0.0	2.1	2	0	0	2	2	2	1	CobB/CobQ-like	glutamine	amidotransferase	domain
GATase	PF00117.28	gi|288560796|ref|YP_003424282.1|	-	1.2e-06	28.4	0.0	2.2e-06	27.6	0.0	1.5	2	0	0	2	2	2	1	Glutamine	amidotransferase	class-I
SNO	PF01174.19	gi|288560796|ref|YP_003424282.1|	-	0.00043	20.2	0.0	0.00048	20.0	0.0	1.3	1	1	0	1	1	1	1	SNO	glutamine	amidotransferase	family
Peptidase_C26	PF07722.13	gi|288560796|ref|YP_003424282.1|	-	0.0055	16.5	0.4	0.029	14.1	0.1	2.3	2	1	0	2	2	2	1	Peptidase	C26
TP_methylase	PF00590.20	gi|288560797|ref|YP_003424283.1|	-	1.3e-49	169.1	0.2	1.4e-49	168.9	0.2	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
Radical_SAM	PF04055.21	gi|288560797|ref|YP_003424283.1|	-	0.072	13.5	0.1	0.11	12.8	0.1	1.5	1	1	0	1	1	1	0	Radical	SAM	superfamily
DUF4013	PF13197.6	gi|288560798|ref|YP_003424284.1|	-	3.6e-21	75.7	23.2	3.6e-21	75.7	23.2	3.1	1	1	2	3	3	3	2	Protein	of	unknown	function	(DUF4013)
Radical_SAM	PF04055.21	gi|288560799|ref|YP_003424285.1|	-	6.7e-20	72.1	0.9	1.6e-19	70.9	0.6	1.8	2	0	0	2	2	2	1	Radical	SAM	superfamily
B12-binding	PF02310.19	gi|288560799|ref|YP_003424285.1|	-	6.4e-17	61.7	0.0	1.7e-16	60.4	0.0	1.7	1	0	0	1	1	1	1	B12	binding	domain
Acid_phosphat_B	PF03767.14	gi|288560799|ref|YP_003424285.1|	-	0.021	14.4	0.0	0.041	13.5	0.0	1.4	1	0	0	1	1	1	0	HAD	superfamily,	subfamily	IIIB	(Acid	phosphatase)
LisH_2	PF16045.5	gi|288560799|ref|YP_003424285.1|	-	2.4	7.2	4.5	0.83	8.7	0.1	2.5	3	0	0	3	3	3	0	LisH
HEM4	PF02602.15	gi|288560800|ref|YP_003424286.1|	-	1.7e-42	145.4	0.0	2.1e-42	145.1	0.0	1.0	1	0	0	1	1	1	1	Uroporphyrinogen-III	synthase	HemD
DUF3692	PF12469.8	gi|288560800|ref|YP_003424286.1|	-	0.11	12.7	0.0	0.26	11.5	0.0	1.5	1	1	0	1	1	1	0	CRISPR-associated	protein
Glycos_transf_2	PF00535.26	gi|288560801|ref|YP_003424287.1|	-	3.2e-08	33.6	0.0	6.5e-08	32.6	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
SRP19	PF01922.17	gi|288560802|ref|YP_003424288.1|	-	1.6e-23	83.5	0.8	1.9e-23	83.2	0.8	1.2	1	0	0	1	1	1	1	SRP19	protein
UMPH-1	PF05822.12	gi|288560802|ref|YP_003424288.1|	-	0.0039	16.7	0.5	0.0046	16.5	0.5	1.1	1	0	0	1	1	1	1	Pyrimidine	5'-nucleotidase	(UMPH-1)
DHHA1	PF02272.19	gi|288560803|ref|YP_003424289.1|	-	4.6e-21	75.7	0.1	1.1e-20	74.5	0.1	1.7	1	0	0	1	1	1	1	DHHA1	domain
DHH	PF01368.20	gi|288560803|ref|YP_003424289.1|	-	0.025	14.8	0.3	0.049	13.9	0.3	1.5	1	0	0	1	1	1	0	DHH	family
HTH_24	PF13412.6	gi|288560804|ref|YP_003424290.1|	-	4.6e-11	42.1	0.2	1.4e-10	40.6	0.2	1.9	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.7	gi|288560804|ref|YP_003424290.1|	-	4.1e-09	36.2	0.0	8.4e-09	35.2	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_11	PF08279.12	gi|288560804|ref|YP_003424290.1|	-	4.8e-07	29.6	0.1	1.1e-06	28.5	0.1	1.7	1	0	0	1	1	1	1	HTH	domain
MarR	PF01047.22	gi|288560804|ref|YP_003424290.1|	-	3.7e-06	26.8	0.1	7.1e-06	25.9	0.1	1.4	1	0	0	1	1	1	1	MarR	family
HTH_Crp_2	PF13545.6	gi|288560804|ref|YP_003424290.1|	-	8.8e-05	22.4	0.0	0.0002	21.3	0.0	1.6	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_27	PF13463.6	gi|288560804|ref|YP_003424290.1|	-	0.00021	21.7	0.0	0.00038	20.9	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_3	PF01381.22	gi|288560804|ref|YP_003424290.1|	-	0.0049	16.9	0.1	0.027	14.5	0.0	2.3	2	0	0	2	2	2	1	Helix-turn-helix
YjhX_toxin	PF09857.9	gi|288560804|ref|YP_003424290.1|	-	0.0072	16.3	0.0	0.016	15.1	0.0	1.5	1	0	0	1	1	1	1	Putative	toxin	of	bacterial	toxin-antitoxin	pair
HTH_36	PF13730.6	gi|288560804|ref|YP_003424290.1|	-	0.014	15.3	0.1	0.031	14.2	0.1	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_IclR	PF09339.10	gi|288560804|ref|YP_003424290.1|	-	0.017	14.9	0.0	0.034	14.0	0.0	1.5	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
Rrf2	PF02082.20	gi|288560804|ref|YP_003424290.1|	-	0.025	14.9	0.1	0.055	13.8	0.1	1.5	1	0	0	1	1	1	0	Transcriptional	regulator
Fe_dep_repress	PF01325.19	gi|288560804|ref|YP_003424290.1|	-	0.036	14.2	0.0	0.089	13.0	0.0	1.6	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_20	PF12840.7	gi|288560804|ref|YP_003424290.1|	-	0.038	14.1	0.0	0.11	12.6	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_34	PF13601.6	gi|288560804|ref|YP_003424290.1|	-	0.039	14.1	0.7	0.13	12.5	0.2	2.2	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
YdaS_antitoxin	PF15943.5	gi|288560804|ref|YP_003424290.1|	-	0.12	12.2	0.0	0.43	10.5	0.0	1.8	2	0	0	2	2	2	0	Putative	antitoxin	of	bacterial	toxin-antitoxin	system,	YdaS/YdaT
HTH_AsnC-type	PF13404.6	gi|288560804|ref|YP_003424290.1|	-	0.12	12.2	0.0	0.72	9.7	0.0	2.3	2	0	0	2	2	2	0	AsnC-type	helix-turn-helix	domain
GntR	PF00392.21	gi|288560804|ref|YP_003424290.1|	-	0.14	11.8	0.0	0.3	10.8	0.0	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
Cas_Cas4	PF01930.17	gi|288560805|ref|YP_003424291.1|	-	1.8e-09	37.9	0.0	1.4e-08	35.0	0.0	1.9	1	1	1	2	2	2	1	Domain	of	unknown	function	DUF83
PDDEXK_1	PF12705.7	gi|288560805|ref|YP_003424291.1|	-	6.5e-07	29.5	0.6	2e-05	24.7	0.6	2.5	1	1	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
Exo5	PF09810.9	gi|288560805|ref|YP_003424291.1|	-	0.00027	20.5	8.8	0.00041	20.0	1.1	2.8	1	1	0	2	2	2	2	Exonuclease	V	-	a	5'	deoxyribonuclease
RDD	PF06271.12	gi|288560806|ref|YP_003424292.1|	-	9.5e-15	55.0	8.7	1.4e-14	54.5	8.7	1.2	1	0	0	1	1	1	1	RDD	family
AIRS_C	PF02769.22	gi|288560807|ref|YP_003424293.1|	-	1.1e-28	100.3	2.4	2.1e-28	99.4	2.4	1.4	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.24	gi|288560807|ref|YP_003424293.1|	-	2.9e-18	66.3	0.6	6.7e-18	65.1	0.6	1.6	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
DUF520	PF04461.13	gi|288560807|ref|YP_003424293.1|	-	0.4	10.8	1.8	0.39	10.8	0.1	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF520)
Ribosomal_S8e	PF01201.22	gi|288560808|ref|YP_003424294.1|	-	4e-34	117.7	5.7	4.5e-34	117.6	5.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S8e
DNA_pol_B	PF00136.21	gi|288560809|ref|YP_003424295.1|	-	1.7e-22	79.8	1.4	2e-22	79.6	1.4	1.0	1	0	0	1	1	1	1	DNA	polymerase	family	B
HAD_2	PF13419.6	gi|288560810|ref|YP_003424296.1|	-	1.8e-27	96.6	0.0	2.7e-27	96.0	0.0	1.3	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.26	gi|288560810|ref|YP_003424296.1|	-	1.5e-13	51.6	0.0	3.2e-12	47.2	0.0	2.0	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.6	gi|288560810|ref|YP_003424296.1|	-	4.1e-10	39.6	0.0	7.1e-10	38.8	0.0	1.3	1	0	0	1	1	1	1	HAD-hyrolase-like
HAD	PF12710.7	gi|288560810|ref|YP_003424296.1|	-	0.00039	20.9	0.0	0.00051	20.5	0.0	1.2	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Acid_phosphat_B	PF03767.14	gi|288560810|ref|YP_003424296.1|	-	0.0035	17.0	0.1	0.0069	16.0	0.1	1.5	1	0	0	1	1	1	1	HAD	superfamily,	subfamily	IIIB	(Acid	phosphatase)
Radical_SAM	PF04055.21	gi|288560810|ref|YP_003424296.1|	-	0.09	13.2	0.0	0.13	12.6	0.0	1.3	1	0	0	1	1	1	0	Radical	SAM	superfamily
HAD_SAK_2	PF18143.1	gi|288560810|ref|YP_003424296.1|	-	0.094	13.0	0.0	0.18	12.1	0.0	1.5	1	1	0	1	1	1	0	HAD	domain	in	Swiss	Army	Knife	RNA	repair	proteins
DZR	PF12773.7	gi|288560811|ref|YP_003424297.1|	-	2.5e-23	81.8	67.0	5.4e-09	35.9	10.6	3.6	1	1	3	4	4	4	4	Double	zinc	ribbon
zinc_ribbon_2	PF13240.6	gi|288560811|ref|YP_003424297.1|	-	1.4e-21	75.4	50.7	2.9e-06	26.8	7.6	5.8	4	2	3	7	7	7	7	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|288560811|ref|YP_003424297.1|	-	4e-17	61.0	43.2	3.7e-05	23.0	4.9	5.4	4	2	1	5	5	5	5	zinc-ribbon	domain
zinc_ribbon_15	PF17032.5	gi|288560811|ref|YP_003424297.1|	-	4.5e-13	49.8	32.2	0.00047	20.9	2.5	4.2	4	0	0	4	4	4	4	zinc-ribbon	family
zinc-ribbons_6	PF07191.12	gi|288560811|ref|YP_003424297.1|	-	2.6e-10	40.1	27.5	0.0012	18.8	2.2	4.2	3	1	1	4	4	4	4	zinc-ribbons
Nudix_N_2	PF14803.6	gi|288560811|ref|YP_003424297.1|	-	4.2e-09	36.2	34.4	0.073	13.0	0.2	7.9	7	1	1	8	8	8	4	Nudix	N-terminal
HypA	PF01155.19	gi|288560811|ref|YP_003424297.1|	-	7.4e-09	35.6	30.0	0.018	15.1	1.1	4.2	2	1	2	4	4	4	4	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
NOB1_Zn_bind	PF08772.11	gi|288560811|ref|YP_003424297.1|	-	1.8e-05	24.8	33.6	0.59	10.3	0.3	6.5	2	1	5	7	7	7	3	Nin	one	binding	(NOB1)	Zn-ribbon	like
YhfH	PF14149.6	gi|288560811|ref|YP_003424297.1|	-	0.00023	21.1	48.1	0.11	12.5	1.2	7.9	4	4	4	8	8	8	2	YhfH-like	protein
Zn-ribbon_8	PF09723.10	gi|288560811|ref|YP_003424297.1|	-	0.00025	21.1	40.5	0.21	11.8	2.5	6.5	3	3	2	5	5	5	2	Zinc	ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|288560811|ref|YP_003424297.1|	-	0.00046	19.6	36.4	0.069	12.7	3.4	6.7	3	2	3	6	6	6	3	TFIIB	zinc-binding
zf-NADH-PPase	PF09297.11	gi|288560811|ref|YP_003424297.1|	-	0.0025	17.4	36.9	0.11	12.1	1.5	7.7	5	3	2	7	7	7	2	NADH	pyrophosphatase	zinc	ribbon	domain
DUF35_N	PF12172.8	gi|288560811|ref|YP_003424297.1|	-	0.003	17.4	0.7	0.003	17.4	0.7	5.4	4	3	0	4	4	4	2	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
UPF0547	PF10571.9	gi|288560811|ref|YP_003424297.1|	-	0.0036	17.4	35.7	0.14	12.3	5.4	6.6	6	1	0	6	6	6	2	Uncharacterised	protein	family	UPF0547
zf-CHY	PF05495.12	gi|288560811|ref|YP_003424297.1|	-	0.0043	17.5	29.1	1.6	9.3	1.9	4.1	2	1	2	4	4	4	2	CHY	zinc	finger
DUF2321	PF10083.9	gi|288560811|ref|YP_003424297.1|	-	0.0048	16.6	7.6	0.0048	16.6	7.6	3.9	1	1	2	4	4	4	2	Uncharacterized	protein	conserved	in	bacteria	(DUF2321)
GFA	PF04828.14	gi|288560811|ref|YP_003424297.1|	-	0.02	15.2	30.4	1.9	8.8	0.3	6.6	1	1	3	5	5	5	0	Glutathione-dependent	formaldehyde-activating	enzyme
DUF2116	PF09889.9	gi|288560811|ref|YP_003424297.1|	-	0.044	13.8	0.1	0.044	13.8	0.1	5.7	5	2	0	5	5	5	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
zinc-ribbon_6	PF10005.9	gi|288560811|ref|YP_003424297.1|	-	0.065	13.9	18.8	0.38	11.5	0.2	3.9	2	1	1	3	3	3	0	zinc-ribbon	domain
zf-LITAF-like	PF10601.9	gi|288560811|ref|YP_003424297.1|	-	0.069	13.4	40.1	0.37	11.1	1.1	7.9	3	3	3	7	7	7	0	LITAF-like	zinc	ribbon	domain
Retinal	PF15449.6	gi|288560811|ref|YP_003424297.1|	-	0.075	10.8	3.3	0.088	10.6	3.3	1.0	1	0	0	1	1	1	0	Retinal	protein
DUF3742	PF12553.8	gi|288560811|ref|YP_003424297.1|	-	0.11	12.7	0.3	0.17	12.0	0.3	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3742)
Zn_ribbon_SprT	PF17283.2	gi|288560811|ref|YP_003424297.1|	-	0.17	11.8	0.4	0.17	11.8	0.4	6.4	6	1	0	6	6	6	0	SprT-like	zinc	ribbon	domain
FYVE	PF01363.21	gi|288560811|ref|YP_003424297.1|	-	0.17	12.0	20.7	2.6	8.2	5.4	3.9	1	1	2	3	3	3	0	FYVE	zinc	finger
zf-IS66	PF13005.7	gi|288560811|ref|YP_003424297.1|	-	0.34	11.3	37.4	17	5.9	0.3	8.3	7	1	2	9	9	8	0	zinc-finger	binding	domain	of	transposase	IS66
DUF1258	PF06869.12	gi|288560811|ref|YP_003424297.1|	-	0.44	10.0	20.7	0.14	11.6	0.4	4.0	2	1	1	4	4	4	0	Protein	of	unknown	function	(DUF1258)
zinc_ribbon_11	PF11682.8	gi|288560811|ref|YP_003424297.1|	-	0.6	10.1	19.0	0.17	11.9	2.3	3.8	1	1	1	3	3	3	0	Probable	zinc-ribbon
zf-C3HC4_3	PF13920.6	gi|288560811|ref|YP_003424297.1|	-	0.64	9.9	30.1	1.1	9.2	2.0	4.6	3	1	2	5	5	5	0	Zinc	finger,	C3HC4	type	(RING	finger)
DNA_ligase_ZBD	PF03119.16	gi|288560811|ref|YP_003424297.1|	-	0.73	9.9	30.0	0.51	10.4	0.4	5.9	5	2	0	5	5	5	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
OrfB_Zn_ribbon	PF07282.11	gi|288560811|ref|YP_003424297.1|	-	0.77	9.7	35.7	7.9	6.5	2.1	5.4	2	1	3	5	5	5	0	Putative	transposase	DNA-binding	domain
DUF1244	PF06844.11	gi|288560811|ref|YP_003424297.1|	-	0.78	10.0	7.4	0.91	9.7	0.0	3.2	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1244)
Zn_Tnp_IS1595	PF12760.7	gi|288560811|ref|YP_003424297.1|	-	1.3	9.1	0.1	1.3	9.1	0.1	6.7	4	3	2	6	6	6	0	Transposase	zinc-ribbon	domain
PolC_DP2	PF03833.13	gi|288560811|ref|YP_003424297.1|	-	2.1	6.1	28.9	1.4	6.6	2.2	3.1	1	1	2	3	3	3	0	DNA	polymerase	II	large	subunit	DP2
tRNA-synt_1g	PF09334.11	gi|288560811|ref|YP_003424297.1|	-	3.4	6.3	19.2	1.5	7.5	0.6	3.7	2	1	1	3	3	3	0	tRNA	synthetases	class	I	(M)
zf-TFIIB	PF13453.6	gi|288560811|ref|YP_003424297.1|	-	4.8	6.6	32.2	1.5	8.2	3.2	6.8	6	1	1	7	7	7	0	Transcription	factor	zinc-finger
Ribosomal_L33	PF00471.20	gi|288560811|ref|YP_003424297.1|	-	6.5	7.3	19.2	9.3	6.8	0.7	5.2	5	1	0	5	5	4	0	Ribosomal	protein	L33
Chordopox_RPO7	PF05864.12	gi|288560811|ref|YP_003424297.1|	-	9.8	6.5	7.6	19	5.6	0.2	4.1	4	1	1	5	5	3	0	Chordopoxvirus	DNA-directed	RNA	polymerase	7	kDa	polypeptide	(RPO7)
HTH_45	PF14947.6	gi|288560812|ref|YP_003424298.1|	-	1.8e-07	31.1	0.6	2.3e-07	30.7	0.6	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_27	PF13463.6	gi|288560812|ref|YP_003424298.1|	-	8.7e-05	22.9	0.0	0.00012	22.5	0.0	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_5	PF01022.20	gi|288560812|ref|YP_003424298.1|	-	0.0005	19.9	0.1	0.00078	19.3	0.1	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
TrmB	PF01978.19	gi|288560812|ref|YP_003424298.1|	-	0.0015	18.4	0.1	0.0019	18.0	0.1	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.6	gi|288560812|ref|YP_003424298.1|	-	0.0019	17.7	0.1	0.0029	17.1	0.1	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HxlR	PF01638.17	gi|288560812|ref|YP_003424298.1|	-	0.016	15.0	0.1	0.022	14.6	0.1	1.2	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
MarR_2	PF12802.7	gi|288560812|ref|YP_003424298.1|	-	0.016	15.1	0.0	0.022	14.6	0.0	1.2	1	0	0	1	1	1	0	MarR	family
DUF1495	PF07381.11	gi|288560812|ref|YP_003424298.1|	-	0.018	14.8	0.3	0.61	9.9	0.3	2.1	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain	(DUF1495)
PNPase	PF03726.14	gi|288560812|ref|YP_003424298.1|	-	0.022	15.2	0.2	0.044	14.3	0.0	1.6	2	0	0	2	2	2	0	Polyribonucleotide	nucleotidyltransferase,	RNA	binding	domain
MarR	PF01047.22	gi|288560812|ref|YP_003424298.1|	-	0.038	13.9	0.0	0.068	13.1	0.0	1.5	1	0	0	1	1	1	0	MarR	family
Replic_Relax	PF13814.6	gi|288560812|ref|YP_003424298.1|	-	0.13	12.3	0.0	0.16	12.1	0.0	1.1	1	0	0	1	1	1	0	Replication-relaxation
Exo_endo_phos	PF03372.23	gi|288560813|ref|YP_003424299.1|	-	1.8e-22	80.0	0.1	2e-22	79.8	0.1	1.0	1	0	0	1	1	1	1	Endonuclease/Exonuclease/phosphatase	family
Exo_endo_phos_2	PF14529.6	gi|288560813|ref|YP_003424299.1|	-	5.5e-05	23.0	0.1	0.0011	18.8	0.0	2.5	2	1	0	2	2	2	1	Endonuclease-reverse	transcriptase
SPATA48	PF15073.6	gi|288560813|ref|YP_003424299.1|	-	0.19	12.0	0.0	0.32	11.3	0.0	1.2	1	0	0	1	1	1	0	Spermatogenesis-associated	protein	48
tRNA-synt_2d	PF01409.20	gi|288560814|ref|YP_003424300.1|	-	2.7e-92	308.7	0.0	3.6e-92	308.3	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	core	domain	(F)
HTH_24	PF13412.6	gi|288560814|ref|YP_003424300.1|	-	1.3e-09	37.5	5.7	3.4e-05	23.3	0.1	3.7	3	0	0	3	3	3	2	Winged	helix-turn-helix	DNA-binding
DUF2582	PF10771.9	gi|288560814|ref|YP_003424300.1|	-	6.8e-09	35.8	5.9	6e-05	23.1	0.6	3.4	3	0	0	3	3	3	2	Winged	helix-turn-helix	domain	(DUF2582)
tRNA_synthFbeta	PF17759.1	gi|288560814|ref|YP_003424300.1|	-	2.6e-08	33.6	0.0	2.4e-05	23.9	0.0	2.3	2	0	0	2	2	2	2	Phenylalanyl	tRNA	synthetase	beta	chain	CLM	domain
tRNA-synt_2b	PF00587.25	gi|288560814|ref|YP_003424300.1|	-	3.3e-05	23.9	0.0	0.00014	21.9	0.0	2.0	2	0	0	2	2	2	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HTH_AsnC-type	PF13404.6	gi|288560814|ref|YP_003424300.1|	-	9.3e-05	22.2	0.7	2	8.3	0.0	3.5	3	0	0	3	3	3	2	AsnC-type	helix-turn-helix	domain
TrmB	PF01978.19	gi|288560814|ref|YP_003424300.1|	-	0.00091	19.1	1.6	0.52	10.2	0.2	2.8	3	0	0	3	3	3	2	Sugar-specific	transcriptional	regulator	TrmB
tRNA-synt_2	PF00152.20	gi|288560814|ref|YP_003424300.1|	-	0.0042	16.2	0.1	0.065	12.3	0.0	2.5	3	0	0	3	3	3	1	tRNA	synthetases	class	II	(D,	K	and	N)
MarR_2	PF12802.7	gi|288560814|ref|YP_003424300.1|	-	0.0053	16.6	0.0	2.6	8.0	0.0	2.8	3	0	0	3	3	2	1	MarR	family
MarR	PF01047.22	gi|288560814|ref|YP_003424300.1|	-	0.0061	16.5	0.7	2	8.4	0.0	3.2	3	0	0	3	3	3	1	MarR	family
RPA_C	PF08784.11	gi|288560814|ref|YP_003424300.1|	-	0.095	13.4	0.2	0.5	11.1	0.1	2.2	2	0	0	2	2	2	0	Replication	protein	A	C	terminal
HTH_36	PF13730.6	gi|288560814|ref|YP_003424300.1|	-	0.13	12.2	0.6	11	6.0	0.0	2.7	2	0	0	2	2	2	0	Helix-turn-helix	domain
TFIIE_alpha	PF02002.17	gi|288560814|ref|YP_003424300.1|	-	0.4	10.6	9.3	0.2	11.5	4.4	2.8	2	1	1	3	3	3	0	TFIIE	alpha	subunit
FIN1	PF17300.2	gi|288560814|ref|YP_003424300.1|	-	1.2	8.6	3.1	2.5	7.5	3.1	1.4	1	0	0	1	1	1	0	Filaments	in	between	nuclei	protein-1
CitG	PF01874.16	gi|288560815|ref|YP_003424301.1|	-	4.6e-72	243.0	0.0	5.2e-72	242.8	0.0	1.0	1	0	0	1	1	1	1	ATP:dephospho-CoA	triphosphoribosyl	transferase
ALAD	PF00490.21	gi|288560816|ref|YP_003424302.1|	-	3.5e-139	463.4	0.2	3.9e-139	463.2	0.2	1.0	1	0	0	1	1	1	1	Delta-aminolevulinic	acid	dehydratase
Chorismate_synt	PF01264.21	gi|288560817|ref|YP_003424303.1|	-	1.7e-134	447.7	2.5	1.9e-134	447.5	2.5	1.0	1	0	0	1	1	1	1	Chorismate	synthase
Lactamase_B_2	PF12706.7	gi|288560818|ref|YP_003424304.1|	-	1.2e-18	67.4	0.0	1.9e-18	66.8	0.0	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.6	gi|288560818|ref|YP_003424304.1|	-	1.1e-06	28.7	0.0	2.1e-06	27.7	0.0	1.5	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|288560818|ref|YP_003424304.1|	-	1.2e-06	28.7	0.6	6e-06	26.4	0.6	1.9	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
PDEase_II	PF02112.15	gi|288560818|ref|YP_003424304.1|	-	0.038	13.1	0.1	0.081	12.0	0.1	1.5	1	0	0	1	1	1	0	cAMP	phosphodiesterases	class-II
DUF2121	PF09894.9	gi|288560819|ref|YP_003424305.1|	-	9.6e-76	253.7	6.6	1.3e-75	253.2	6.6	1.2	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2121)
Desulfoferrodox	PF01880.18	gi|288560820|ref|YP_003424306.1|	-	1.1e-20	74.0	0.4	1.5e-20	73.6	0.4	1.2	1	0	0	1	1	1	1	Desulfoferrodoxin
Desulfoferrod_N	PF06397.12	gi|288560820|ref|YP_003424306.1|	-	4.2e-16	58.3	5.8	8.6e-16	57.3	5.8	1.6	1	0	0	1	1	1	1	Desulfoferrodoxin,	N-terminal	domain
Zn-ribbon_8	PF09723.10	gi|288560820|ref|YP_003424306.1|	-	0.093	12.9	0.5	0.25	11.5	0.6	1.7	1	1	0	1	1	1	0	Zinc	ribbon	domain
PTS_IIA	PF02255.16	gi|288560821|ref|YP_003424307.1|	-	0.00081	19.4	0.2	0.55	10.3	0.1	2.4	2	1	0	2	2	2	2	PTS	system,	Lactose/Cellobiose	specific	IIA	subunit
DUF948	PF06103.11	gi|288560821|ref|YP_003424307.1|	-	0.083	13.2	0.7	2.6	8.4	0.1	2.2	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
Vps51	PF08700.11	gi|288560821|ref|YP_003424307.1|	-	0.16	12.0	4.5	0.14	12.2	1.4	2.3	2	1	0	2	2	2	0	Vps51/Vps67
ABC2_membrane_3	PF12698.7	gi|288560821|ref|YP_003424307.1|	-	0.32	10.1	10.3	0.41	9.7	10.3	1.1	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
tRNA_anti-codon	PF01336.25	gi|288560822|ref|YP_003424308.1|	-	2.6e-09	36.9	0.1	6.6e-09	35.6	0.1	1.8	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
DnaJ_CXXCXGXG	PF00684.19	gi|288560822|ref|YP_003424308.1|	-	1.5e-07	31.6	17.6	6e-07	29.7	7.9	2.8	1	1	1	2	2	2	2	DnaJ	central	domain
S1	PF00575.23	gi|288560822|ref|YP_003424308.1|	-	9e-06	25.9	0.5	3.3e-05	24.2	0.5	2.1	1	0	0	1	1	1	1	S1	RNA	binding	domain
DHH	PF01368.20	gi|288560822|ref|YP_003424308.1|	-	2.1e-05	24.7	0.2	5.7e-05	23.3	0.1	1.6	1	1	0	1	1	1	1	DHH	family
tRNA_anti_2	PF13742.6	gi|288560822|ref|YP_003424308.1|	-	0.00046	20.3	0.2	0.0015	18.6	0.1	2.1	2	0	0	2	2	2	1	OB-fold	nucleic	acid	binding	domain
DUF2116	PF09889.9	gi|288560822|ref|YP_003424308.1|	-	0.009	16.0	2.7	0.018	15.0	2.7	1.4	1	0	0	1	1	1	1	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
DZR	PF12773.7	gi|288560822|ref|YP_003424308.1|	-	0.011	15.7	2.1	0.011	15.7	2.1	3.0	1	1	1	2	2	2	0	Double	zinc	ribbon
DHHA1	PF02272.19	gi|288560822|ref|YP_003424308.1|	-	0.034	14.6	0.3	1.4	9.3	0.0	2.8	2	0	0	2	2	2	0	DHHA1	domain
DUF5351	PF17302.2	gi|288560822|ref|YP_003424308.1|	-	0.035	14.3	14.6	0.23	11.7	2.5	4.3	3	1	0	3	3	3	0	Family	of	unknown	function	(DUF5351)
RMI2	PF16100.5	gi|288560822|ref|YP_003424308.1|	-	0.042	13.7	0.0	0.079	12.8	0.0	1.4	1	0	0	1	1	1	0	RecQ-mediated	genome	instability	protein	2
IF3_C	PF00707.22	gi|288560822|ref|YP_003424308.1|	-	0.14	12.2	0.4	6	6.9	0.0	3.3	3	0	0	3	3	3	0	Translation	initiation	factor	IF-3,	C-terminal	domain
NOB1_Zn_bind	PF08772.11	gi|288560822|ref|YP_003424308.1|	-	0.33	11.1	2.6	0.41	10.8	0.1	2.2	2	0	0	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
Anti-TRAP	PF15777.5	gi|288560822|ref|YP_003424308.1|	-	1.3	9.1	21.0	1.2	9.1	3.0	4.0	2	2	1	3	3	3	0	Tryptophan	RNA-binding	attenuator	protein	inhibitory	protein
NRDD	PF13597.6	gi|288560822|ref|YP_003424308.1|	-	3.9	6.1	5.5	8.7	5.0	5.5	1.5	1	0	0	1	1	1	0	Anaerobic	ribonucleoside-triphosphate	reductase
NifU_N	PF01592.16	gi|288560823|ref|YP_003424309.1|	-	2.4e-49	166.7	0.4	2.7e-49	166.6	0.4	1.0	1	0	0	1	1	1	1	NifU-like	N	terminal	domain
TSCPD	PF12637.7	gi|288560823|ref|YP_003424309.1|	-	0.00081	19.6	0.9	0.0034	17.6	0.9	1.9	1	1	0	1	1	1	1	TSCPD	domain
Aminotran_5	PF00266.19	gi|288560824|ref|YP_003424310.1|	-	1.3e-87	294.2	0.0	1.6e-87	293.9	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.21	gi|288560824|ref|YP_003424310.1|	-	6.5e-09	35.5	0.1	8.7e-09	35.1	0.1	1.2	1	0	0	1	1	1	1	Beta-eliminating	lyase
Cys_Met_Meta_PP	PF01053.20	gi|288560824|ref|YP_003424310.1|	-	8.7e-05	21.2	1.0	9.6e-05	21.1	0.1	1.4	2	0	0	2	2	2	1	Cys/Met	metabolism	PLP-dependent	enzyme
DegT_DnrJ_EryC1	PF01041.17	gi|288560824|ref|YP_003424310.1|	-	0.00021	20.7	0.3	0.0003	20.2	0.3	1.1	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Pyridoxal_deC	PF00282.19	gi|288560824|ref|YP_003424310.1|	-	0.018	13.8	0.1	0.03	13.1	0.1	1.3	1	0	0	1	1	1	0	Pyridoxal-dependent	decarboxylase	conserved	domain
Cys_Met_Meta_PP	PF01053.20	gi|288560825|ref|YP_003424311.1|	-	2.6e-137	457.4	0.0	2.9e-137	457.3	0.0	1.0	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
DegT_DnrJ_EryC1	PF01041.17	gi|288560825|ref|YP_003424311.1|	-	9.4e-12	44.9	0.8	1.5e-11	44.3	0.4	1.5	2	0	0	2	2	2	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_1_2	PF00155.21	gi|288560825|ref|YP_003424311.1|	-	2e-07	30.5	0.0	2.9e-07	30.0	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.19	gi|288560825|ref|YP_003424311.1|	-	1.4e-05	24.3	0.1	2.4e-05	23.5	0.1	1.4	1	0	0	1	1	1	1	Aminotransferase	class-V
Met_gamma_lyase	PF06838.11	gi|288560825|ref|YP_003424311.1|	-	6.7e-05	21.6	0.1	0.00048	18.8	0.1	2.0	1	1	0	1	1	1	1	Methionine	gamma-lyase
Beta_elim_lyase	PF01212.21	gi|288560825|ref|YP_003424311.1|	-	0.15	11.3	0.0	0.53	9.5	0.0	1.9	1	1	0	1	1	1	0	Beta-eliminating	lyase
SepSecS	PF05889.13	gi|288560825|ref|YP_003424311.1|	-	0.18	10.4	0.0	0.27	9.9	0.0	1.2	1	0	0	1	1	1	0	O-phosphoseryl-tRNA(Sec)	selenium	transferase,	SepSecS
ATP-grasp_5	PF13549.6	gi|288560826|ref|YP_003424312.1|	-	4.1e-72	242.3	1.3	6.4e-72	241.6	1.3	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
Succ_CoA_lig	PF13607.6	gi|288560826|ref|YP_003424312.1|	-	1.1e-50	171.0	0.8	2.6e-50	169.8	0.4	1.9	3	0	0	3	3	3	1	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding_2	PF13380.6	gi|288560826|ref|YP_003424312.1|	-	1.9e-22	79.9	0.3	8.5e-22	77.8	0.0	2.2	2	0	0	2	2	2	1	CoA	binding	domain
CoA_binding	PF02629.19	gi|288560826|ref|YP_003424312.1|	-	7.9e-13	48.9	0.5	3.6e-12	46.8	0.5	2.3	1	0	0	1	1	1	1	CoA	binding	domain
ATP-grasp_2	PF08442.10	gi|288560826|ref|YP_003424312.1|	-	0.006	16.2	0.5	0.01	15.4	0.5	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
tRNA-synt_1e	PF01406.19	gi|288560827|ref|YP_003424313.1|	-	1.6e-120	402.1	0.1	2.4e-120	401.5	0.1	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1g	PF09334.11	gi|288560827|ref|YP_003424313.1|	-	4.4e-17	61.9	4.4	8.1e-09	34.7	0.7	2.6	2	1	0	3	3	3	2	tRNA	synthetases	class	I	(M)
tRNA-synt_1	PF00133.22	gi|288560827|ref|YP_003424313.1|	-	6.5e-11	41.2	0.0	2e-08	33.0	0.0	2.2	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(I,	L,	M	and	V)
DALR_2	PF09190.11	gi|288560827|ref|YP_003424313.1|	-	2.3e-10	40.8	0.8	4.7e-10	39.8	0.2	1.8	2	0	0	2	2	2	1	DALR	domain
tRNA-synt_1c	PF00749.21	gi|288560827|ref|YP_003424313.1|	-	0.0001	21.3	0.2	0.00074	18.5	0.1	2.3	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
tRNA-synt_1d	PF00750.19	gi|288560827|ref|YP_003424313.1|	-	0.0014	17.7	0.1	0.014	14.3	0.0	2.3	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(R)
tRNA-synt_1f	PF01921.18	gi|288560827|ref|YP_003424313.1|	-	0.0014	17.6	0.1	0.0092	14.9	0.0	2.0	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(K)
TetR_C_27	PF17935.1	gi|288560827|ref|YP_003424313.1|	-	0.035	14.2	0.1	6.2	6.9	0.1	2.6	2	0	0	2	2	2	0	Tetracyclin	repressor-like,	C-terminal	domain
HTH_3	PF01381.22	gi|288560828|ref|YP_003424314.1|	-	0.00048	20.1	0.1	0.00075	19.5	0.1	1.3	1	0	0	1	1	1	1	Helix-turn-helix
DUF3939	PF13075.6	gi|288560828|ref|YP_003424314.1|	-	0.01	15.9	0.1	0.25	11.4	0.0	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3939)
HTH_37	PF13744.6	gi|288560828|ref|YP_003424314.1|	-	0.012	15.6	0.1	0.019	14.9	0.1	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
DUF4473	PF14747.6	gi|288560828|ref|YP_003424314.1|	-	0.03	14.9	0.1	0.046	14.3	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4473)
HTH_5	PF01022.20	gi|288560828|ref|YP_003424314.1|	-	0.094	12.6	0.0	0.18	11.7	0.0	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
Hexapep	PF00132.24	gi|288560829|ref|YP_003424315.1|	-	1.9e-09	36.9	9.9	0.00022	20.8	2.6	2.5	2	0	0	2	2	2	2	Bacterial	transferase	hexapeptide	(six	repeats)
SATase_N	PF06426.14	gi|288560829|ref|YP_003424315.1|	-	0.0067	16.8	0.1	0.011	16.1	0.1	1.4	1	0	0	1	1	1	1	Serine	acetyltransferase,	N-terminal
Hexapep_2	PF14602.6	gi|288560829|ref|YP_003424315.1|	-	0.01	15.5	13.0	0.39	10.5	3.1	2.6	2	1	0	2	2	2	0	Hexapeptide	repeat	of	succinyl-transferase
PALP	PF00291.25	gi|288560830|ref|YP_003424316.1|	-	4.2e-67	226.6	0.1	4.7e-67	226.5	0.1	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
ADH_zinc_N	PF00107.26	gi|288560830|ref|YP_003424316.1|	-	0.025	14.6	0.1	0.066	13.2	0.1	1.7	1	1	0	1	1	1	0	Zinc-binding	dehydrogenase
DNA_binding_1	PF01035.20	gi|288560831|ref|YP_003424317.1|	-	5.7e-24	84.1	0.0	9e-24	83.4	0.0	1.3	1	0	0	1	1	1	1	6-O-methylguanine	DNA	methyltransferase,	DNA	binding	domain
NOG1_N	PF17835.1	gi|288560831|ref|YP_003424317.1|	-	0.039	13.9	0.5	0.053	13.5	0.5	1.2	1	0	0	1	1	1	0	NOG1	N-terminal	helical	domain
HhH-GPD	PF00730.25	gi|288560832|ref|YP_003424318.1|	-	1.7e-25	89.6	0.0	2.9e-25	88.8	0.0	1.4	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
HHH	PF00633.23	gi|288560832|ref|YP_003424318.1|	-	8.9e-08	31.6	0.0	2.5e-07	30.2	0.0	1.8	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
HHH_8	PF14716.6	gi|288560832|ref|YP_003424318.1|	-	0.037	14.4	0.0	1.7	9.1	0.0	2.5	2	0	0	2	2	2	0	Helix-hairpin-helix	domain
DUF2400	PF09674.10	gi|288560832|ref|YP_003424318.1|	-	0.041	13.9	0.0	0.12	12.4	0.0	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2400)
HHH_5	PF14520.6	gi|288560832|ref|YP_003424318.1|	-	0.044	14.4	0.0	1.4	9.5	0.0	2.6	2	1	0	2	2	2	0	Helix-hairpin-helix	domain
HHH_2	PF12826.7	gi|288560832|ref|YP_003424318.1|	-	0.064	13.4	0.0	6.5	6.9	0.0	2.4	2	0	0	2	2	2	0	Helix-hairpin-helix	motif
DUF4942	PF13708.6	gi|288560832|ref|YP_003424318.1|	-	0.14	12.1	0.1	0.21	11.5	0.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4942)
EndIII_4Fe-2S	PF10576.9	gi|288560832|ref|YP_003424318.1|	-	0.23	11.8	6.5	0.41	11.1	6.5	1.4	1	0	0	1	1	1	0	Iron-sulfur	binding	domain	of	endonuclease	III
EPSP_synthase	PF00275.20	gi|288560833|ref|YP_003424319.1|	-	3.1e-119	398.4	0.0	1.4e-118	396.3	0.0	2.0	1	1	0	1	1	1	1	EPSP	synthase	(3-phosphoshikimate	1-carboxyvinyltransferase)
DUF4265	PF14085.6	gi|288560833|ref|YP_003424319.1|	-	0.027	14.4	0.0	21	5.1	0.0	3.3	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4265)
ABC1	PF03109.16	gi|288560834|ref|YP_003424320.1|	-	6.9e-34	116.6	0.3	1.7e-33	115.3	0.3	1.7	1	0	0	1	1	1	1	ABC1	family
Pkinase	PF00069.25	gi|288560834|ref|YP_003424320.1|	-	5.3e-06	26.0	0.4	1.6e-05	24.4	0.4	1.8	1	1	0	1	1	1	1	Protein	kinase	domain
APH	PF01636.23	gi|288560834|ref|YP_003424320.1|	-	4e-05	23.6	0.5	0.0002	21.3	0.6	1.9	1	1	1	2	2	2	1	Phosphotransferase	enzyme	family
RIO1	PF01163.22	gi|288560834|ref|YP_003424320.1|	-	0.00058	19.5	1.0	0.0024	17.5	1.0	2.0	1	1	0	1	1	1	1	RIO1	family
DUF1810	PF08837.11	gi|288560835|ref|YP_003424321.1|	-	5.2e-53	178.5	0.0	5.7e-53	178.4	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1810)
zf-CCCH_7	PF18586.1	gi|288560835|ref|YP_003424321.1|	-	0.074	13.4	0.7	0.19	12.1	0.7	1.7	1	1	0	1	1	1	0	Chromatin	remodeling	factor	Mit1	C-terminal	Zn	finger	1
ADP_ribosyl_GH	PF03747.14	gi|288560836|ref|YP_003424322.1|	-	4.5e-36	125.1	0.1	1.9e-35	123.0	0.1	1.9	1	1	0	1	1	1	1	ADP-ribosylglycohydrolase
DUF5372	PF17342.2	gi|288560836|ref|YP_003424322.1|	-	0.002	18.5	0.0	0.0039	17.6	0.0	1.5	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5372)
Peptidase_S24	PF00717.23	gi|288560837|ref|YP_003424323.1|	-	3.1e-11	43.1	0.2	6.1e-11	42.1	0.2	1.5	1	0	0	1	1	1	1	Peptidase	S24-like
DDE_Tnp_1	PF01609.21	gi|288560839|ref|YP_003424325.1|	-	1e-15	58.0	0.5	1.8e-15	57.2	0.5	1.3	1	0	0	1	1	1	1	Transposase	DDE	domain
DUF3173	PF11372.8	gi|288560839|ref|YP_003424325.1|	-	0.045	13.6	1.0	0.14	12.0	0.3	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3173)
Skp1	PF01466.19	gi|288560839|ref|YP_003424325.1|	-	0.069	13.3	0.1	0.17	12.0	0.1	1.7	1	0	0	1	1	1	0	Skp1	family,	dimerisation	domain
tRNA-synt_1	PF00133.22	gi|288560840|ref|YP_003424326.1|	-	7.2e-142	473.7	0.0	1e-140	469.9	0.0	2.2	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.13	gi|288560840|ref|YP_003424326.1|	-	1.2e-36	126.0	1.0	2.6e-36	124.9	1.0	1.6	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.11	gi|288560840|ref|YP_003424326.1|	-	1e-20	73.9	3.2	7.1e-12	44.8	0.0	4.1	4	0	0	4	4	4	3	tRNA	synthetases	class	I	(M)
tRNA-synt_1_2	PF13603.6	gi|288560840|ref|YP_003424326.1|	-	7.8e-08	32.0	0.0	1.9e-07	30.8	0.0	1.6	1	0	0	1	1	1	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1e	PF01406.19	gi|288560840|ref|YP_003424326.1|	-	0.05	12.9	0.0	2.2	7.6	0.0	2.4	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(C)	catalytic	domain
zf_UBZ	PF18439.1	gi|288560840|ref|YP_003424326.1|	-	7.5	6.3	7.2	8.9	6.0	0.1	3.7	4	0	0	4	4	4	0	Ubiquitin-Binding	Zinc	Finger
tRNA_synthFbeta	PF17759.1	gi|288560842|ref|YP_003424328.1|	-	1e-41	142.8	0.1	1.4e-41	142.3	0.1	1.2	1	0	0	1	1	1	1	Phenylalanyl	tRNA	synthetase	beta	chain	CLM	domain
B5	PF03484.15	gi|288560842|ref|YP_003424328.1|	-	4.1e-16	59.0	2.3	4.4e-13	49.3	0.2	3.4	4	0	0	4	4	4	2	tRNA	synthetase	B5	domain
B3_4	PF03483.17	gi|288560842|ref|YP_003424328.1|	-	3.1e-14	53.0	0.1	5.7e-14	52.2	0.1	1.4	1	0	0	1	1	1	1	B3/4	domain
tRNA-synt_2d	PF01409.20	gi|288560842|ref|YP_003424328.1|	-	3.4e-07	30.0	0.1	6e-07	29.2	0.1	1.3	1	0	0	1	1	1	1	tRNA	synthetases	class	II	core	domain	(F)
PhetRS_B1	PF18262.1	gi|288560842|ref|YP_003424328.1|	-	0.0082	16.3	0.7	0.081	13.2	0.0	3.1	3	1	0	3	3	3	1	Phe-tRNA	synthetase	beta	subunit	B1	domain
Zn-ribbon_8	PF09723.10	gi|288560843|ref|YP_003424329.1|	-	0.0012	19.0	13.7	0.0027	17.8	0.7	3.4	3	0	0	3	3	3	1	Zinc	ribbon	domain
FYVE	PF01363.21	gi|288560843|ref|YP_003424329.1|	-	0.0054	16.8	5.4	0.69	10.1	0.1	2.4	2	0	0	2	2	2	2	FYVE	zinc	finger
DZR	PF12773.7	gi|288560843|ref|YP_003424329.1|	-	0.032	14.3	9.6	0.17	11.9	0.7	3.0	2	1	1	3	3	3	0	Double	zinc	ribbon
HypA	PF01155.19	gi|288560843|ref|YP_003424329.1|	-	0.32	11.0	0.1	0.32	11.0	0.1	2.6	2	1	0	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
CpXC	PF14353.6	gi|288560843|ref|YP_003424329.1|	-	0.62	10.1	12.0	1.8	8.7	0.0	3.9	2	2	2	4	4	4	0	CpXC	protein
Zn_ribbon_SprT	PF17283.2	gi|288560843|ref|YP_003424329.1|	-	0.71	9.8	0.1	0.71	9.8	0.1	3.2	3	0	0	3	3	3	0	SprT-like	zinc	ribbon	domain
zinc-ribbons_6	PF07191.12	gi|288560843|ref|YP_003424329.1|	-	1	9.4	9.1	7.8	6.6	0.7	3.4	3	1	0	3	3	3	0	zinc-ribbons
Nop10p	PF04135.12	gi|288560843|ref|YP_003424329.1|	-	2.9	8.0	5.3	0.49	10.5	0.3	2.3	3	1	0	3	3	3	0	Nucleolar	RNA-binding	protein,	Nop10p	family
zf-IS66	PF13005.7	gi|288560843|ref|YP_003424329.1|	-	3.9	8.0	8.0	40	4.7	0.1	3.9	4	0	0	4	4	4	0	zinc-finger	binding	domain	of	transposase	IS66
Glyco_hydro_cc	PF11790.8	gi|288560843|ref|YP_003424329.1|	-	5.1	6.6	5.8	8	5.9	0.0	2.2	2	0	0	2	2	2	0	Glycosyl	hydrolase	catalytic	core
zf_UBZ	PF18439.1	gi|288560843|ref|YP_003424329.1|	-	5.6	6.7	10.5	3.2	7.4	0.1	3.8	4	0	0	4	4	4	0	Ubiquitin-Binding	Zinc	Finger
AstE_AspA	PF04952.14	gi|288560844|ref|YP_003424330.1|	-	1.1e-08	34.5	0.0	1.7e-08	33.9	0.0	1.3	1	0	0	1	1	1	1	Succinylglutamate	desuccinylase	/	Aspartoacylase	family
Big_1	PF02369.16	gi|288560844|ref|YP_003424330.1|	-	7.6e-07	29.0	0.4	0.059	13.4	0.0	3.3	3	0	0	3	3	3	2	Bacterial	Ig-like	domain	(group	1)
CarboxypepD_reg	PF13620.6	gi|288560844|ref|YP_003424330.1|	-	1.1e-05	25.6	0.0	0.0077	16.5	0.0	2.6	2	0	0	2	2	2	2	Carboxypeptidase	regulatory-like	domain
MG4	PF17789.1	gi|288560844|ref|YP_003424330.1|	-	4e-05	23.7	0.0	0.37	11.0	0.0	3.0	2	1	0	2	2	2	2	Macroglobulin	domain	MG4
Big_3_5	PF16640.5	gi|288560844|ref|YP_003424330.1|	-	7.6e-05	22.8	7.4	0.00012	22.2	0.8	3.3	3	0	0	3	3	3	1	Bacterial	Ig-like	domain	(group	3)
Peptidase_M14	PF00246.24	gi|288560844|ref|YP_003424330.1|	-	0.0094	15.8	0.0	0.018	14.8	0.0	1.5	1	0	0	1	1	1	1	Zinc	carboxypeptidase
Invasin_D3	PF09134.10	gi|288560844|ref|YP_003424330.1|	-	0.012	15.9	3.4	0.15	12.4	1.2	2.9	2	0	0	2	2	2	0	Invasin,	domain	3
UPF0047	PF01894.17	gi|288560845|ref|YP_003424331.1|	-	1.1e-34	119.1	0.0	1.3e-34	118.8	0.0	1.1	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0047
zf-ribbon_3	PF13248.6	gi|288560846|ref|YP_003424332.1|	-	6e-07	28.7	1.7	8.4e-07	28.2	1.7	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|288560846|ref|YP_003424332.1|	-	1.9e-05	24.6	0.3	1.9e-05	24.6	0.3	1.1	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_2	PF13240.6	gi|288560846|ref|YP_003424332.1|	-	8e-05	22.2	2.3	0.0001	21.9	2.3	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-RanBP	PF00641.18	gi|288560846|ref|YP_003424332.1|	-	0.00026	20.2	2.6	0.00032	19.9	2.6	1.1	1	0	0	1	1	1	1	Zn-finger	in	Ran	binding	protein	and	others
DUF35_N	PF12172.8	gi|288560846|ref|YP_003424332.1|	-	0.0005	19.9	0.6	0.00066	19.5	0.6	1.1	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
OrfB_Zn_ribbon	PF07282.11	gi|288560846|ref|YP_003424332.1|	-	0.023	14.6	0.2	0.029	14.3	0.2	1.2	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
Rubredoxin_2	PF18073.1	gi|288560846|ref|YP_003424332.1|	-	0.12	12.1	3.0	3.2	7.6	0.2	2.1	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
HypA	PF01155.19	gi|288560846|ref|YP_003424332.1|	-	0.14	12.2	0.3	0.14	12.1	0.3	1.1	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Chordopox_RPO7	PF05864.12	gi|288560846|ref|YP_003424332.1|	-	0.16	12.3	0.2	0.16	12.3	0.2	1.8	2	0	0	2	2	2	0	Chordopoxvirus	DNA-directed	RNA	polymerase	7	kDa	polypeptide	(RPO7)
A2L_zn_ribbon	PF08792.10	gi|288560846|ref|YP_003424332.1|	-	0.2	11.4	3.5	3.6	7.4	0.1	2.1	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|288560846|ref|YP_003424332.1|	-	1	8.9	6.3	6.7	6.3	6.3	1.9	1	1	0	1	1	1	0	TFIIB	zinc-binding
Motilin_ghrelin	PF04644.12	gi|288560847|ref|YP_003424333.1|	-	0.42	10.5	4.0	1	9.2	4.0	1.6	1	0	0	1	1	1	0	Motilin/ghrelin
VWA	PF00092.28	gi|288560849|ref|YP_003424335.1|	-	3e-07	30.8	0.1	3.7e-07	30.6	0.1	1.1	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA_CoxE	PF05762.14	gi|288560849|ref|YP_003424335.1|	-	1.3e-06	28.0	0.0	1.9e-06	27.4	0.0	1.1	1	0	0	1	1	1	1	VWA	domain	containing	CoxE-like	protein
VWA_2	PF13519.6	gi|288560849|ref|YP_003424335.1|	-	8.3e-06	26.4	0.0	1.5e-05	25.6	0.0	1.4	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
DUF3810	PF12725.7	gi|288560849|ref|YP_003424335.1|	-	0.022	14.1	0.1	0.029	13.7	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3810)
HEAT	PF02985.22	gi|288560850|ref|YP_003424336.1|	-	5e-05	23.2	1.0	7.7	7.1	0.0	5.6	5	0	0	5	5	5	2	HEAT	repeat
HEAT_2	PF13646.6	gi|288560850|ref|YP_003424336.1|	-	0.00022	21.6	1.8	3.9	7.9	0.1	5.1	4	1	1	5	5	5	3	HEAT	repeats
p31comet	PF06581.12	gi|288560850|ref|YP_003424336.1|	-	0.12	11.5	0.0	0.2	10.8	0.0	1.2	1	0	0	1	1	1	0	Mad1	and	Cdc20-bound-Mad2	binding
RyR	PF02026.16	gi|288560851|ref|YP_003424337.1|	-	0.035	14.3	1.8	1.8	8.8	1.8	2.3	1	1	0	1	1	1	0	RyR	domain
CM2	PF03021.14	gi|288560851|ref|YP_003424337.1|	-	0.22	11.3	0.8	0.55	10.0	0.2	1.7	1	1	1	2	2	2	0	Influenza	C	virus	M2	protein
SWIM	PF04434.17	gi|288560852|ref|YP_003424338.1|	-	0.037	13.7	0.7	0.086	12.5	0.7	1.6	1	1	0	1	1	1	0	SWIM	zinc	finger
G3P_antiterm	PF04309.12	gi|288560852|ref|YP_003424338.1|	-	0.09	12.2	0.0	0.1	12.0	0.0	1.1	1	0	0	1	1	1	0	Glycerol-3-phosphate	responsive	antiterminator
EamA	PF00892.20	gi|288560853|ref|YP_003424339.1|	-	8e-42	142.7	41.0	1.4e-21	77.1	16.4	2.0	2	0	0	2	2	2	2	EamA-like	transporter	family
TPT	PF03151.16	gi|288560853|ref|YP_003424339.1|	-	1.8e-12	47.2	23.3	5.8e-12	45.5	23.4	1.7	1	1	0	1	1	1	1	Triose-phosphate	Transporter	family
PUNUT	PF16913.5	gi|288560853|ref|YP_003424339.1|	-	0.0013	18.0	14.8	0.0013	18.0	14.8	2.4	1	1	1	2	2	2	1	Purine	nucleobase	transmembrane	transport
Multi_Drug_Res	PF00893.19	gi|288560853|ref|YP_003424339.1|	-	0.036	14.7	4.5	0.036	14.7	4.5	3.7	3	2	2	5	5	5	0	Small	Multidrug	Resistance	protein
TMEM234	PF10639.9	gi|288560853|ref|YP_003424339.1|	-	7.6	6.6	12.5	1.6	8.8	6.2	2.9	2	1	0	2	2	2	0	Putative	transmembrane	family	234
DUF2070	PF09843.9	gi|288560853|ref|YP_003424339.1|	-	9.6	4.4	39.7	0.23	9.7	20.9	2.0	1	1	1	2	2	2	0	Predicted	membrane	protein	(DUF2070)
MacB_PCD	PF12704.7	gi|288560854|ref|YP_003424340.1|	-	0.095	13.0	0.1	0.12	12.8	0.1	1.1	1	0	0	1	1	1	0	MacB-like	periplasmic	core	domain
TFIIB	PF00382.19	gi|288560856|ref|YP_003424342.1|	-	1.4e-34	117.9	0.7	1.1e-16	60.6	0.0	2.6	2	1	1	3	3	3	2	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.12	gi|288560856|ref|YP_003424342.1|	-	1.4e-12	46.9	1.5	1.4e-12	46.9	1.5	1.7	2	0	0	2	2	2	1	TFIIB	zinc-binding
Cyclin_N	PF00134.23	gi|288560856|ref|YP_003424342.1|	-	0.0008	19.1	0.1	0.29	10.9	0.1	2.4	1	1	1	2	2	2	2	Cyclin,	N-terminal	domain
RB_B	PF01857.20	gi|288560856|ref|YP_003424342.1|	-	0.0009	19.3	0.0	0.0018	18.3	0.0	1.5	1	0	0	1	1	1	1	Retinoblastoma-associated	protein	B	domain
Sigma70_r4	PF04545.16	gi|288560856|ref|YP_003424342.1|	-	0.0015	18.0	0.4	0.0015	18.0	0.4	2.7	4	0	0	4	4	3	1	Sigma-70,	region	4
zf-ribbon_3	PF13248.6	gi|288560856|ref|YP_003424342.1|	-	0.0023	17.3	0.5	0.38	10.2	0.1	2.3	2	0	0	2	2	2	1	zinc-ribbon	domain
Cyclin_C	PF02984.19	gi|288560856|ref|YP_003424342.1|	-	0.0059	16.7	0.0	0.24	11.5	0.0	2.9	3	0	0	3	3	3	1	Cyclin,	C-terminal	domain
Sigma70_r4_2	PF08281.12	gi|288560856|ref|YP_003424342.1|	-	0.007	16.0	0.1	0.027	14.1	0.1	2.0	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_AsnC-type	PF13404.6	gi|288560856|ref|YP_003424342.1|	-	0.0079	16.0	4.0	0.0096	15.7	0.1	2.9	2	0	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
Ribosomal_S27e	PF01667.17	gi|288560856|ref|YP_003424342.1|	-	0.01	15.5	0.6	0.02	14.6	0.6	1.4	1	0	0	1	1	1	0	Ribosomal	protein	S27
OrfB_Zn_ribbon	PF07282.11	gi|288560856|ref|YP_003424342.1|	-	0.013	15.4	0.3	0.031	14.2	0.3	1.6	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
Lar_restr_allev	PF14354.6	gi|288560856|ref|YP_003424342.1|	-	0.03	14.7	0.2	0.26	11.7	0.2	2.2	2	0	0	2	2	2	0	Restriction	alleviation	protein	Lar
zf-ACC	PF17848.1	gi|288560856|ref|YP_003424342.1|	-	0.035	14.2	2.4	1.8	8.7	0.1	3.5	3	0	0	3	3	3	0	Acetyl-coA	carboxylase	zinc	finger	domain
DUF2318	PF10080.9	gi|288560856|ref|YP_003424342.1|	-	0.13	12.4	0.4	0.9	9.7	0.3	2.1	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2318)
Zn-ribbon_8	PF09723.10	gi|288560856|ref|YP_003424342.1|	-	0.55	10.4	6.3	0.43	10.7	0.4	2.6	2	1	1	3	3	2	0	Zinc	ribbon	domain
HTH_24	PF13412.6	gi|288560856|ref|YP_003424342.1|	-	0.57	9.8	3.7	1.1	8.8	0.0	3.1	3	0	0	3	3	3	0	Winged	helix-turn-helix	DNA-binding
DUF5433	PF17498.2	gi|288560857|ref|YP_003424343.1|	-	0.048	13.9	0.4	0.048	13.9	0.4	1.5	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5433)
Pro_CA	PF00484.19	gi|288560858|ref|YP_003424344.1|	-	2.6e-15	57.1	0.1	1.1e-14	55.0	0.1	1.8	1	1	0	1	1	1	1	Carbonic	anhydrase
ParA	PF10609.9	gi|288560859|ref|YP_003424345.1|	-	3.6e-92	308.3	0.7	4.3e-92	308.0	0.7	1.0	1	0	0	1	1	1	1	NUBPL	iron-transfer	P-loop	NTPase
CbiA	PF01656.23	gi|288560859|ref|YP_003424345.1|	-	4.2e-13	49.5	0.0	1.1e-12	48.1	0.0	1.7	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.6	gi|288560859|ref|YP_003424345.1|	-	1.4e-07	31.6	2.3	8.2e-06	25.8	2.3	2.2	1	1	0	1	1	1	1	AAA	domain
ArsA_ATPase	PF02374.15	gi|288560859|ref|YP_003424345.1|	-	1.5e-05	24.3	0.2	0.00051	19.3	0.1	2.4	2	0	0	2	2	2	1	Anion-transporting	ATPase
Fer4_NifH	PF00142.18	gi|288560859|ref|YP_003424345.1|	-	2e-05	24.2	0.2	0.025	14.0	0.2	2.4	2	0	0	2	2	2	2	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
MipZ	PF09140.11	gi|288560859|ref|YP_003424345.1|	-	0.00047	19.5	0.1	0.0011	18.4	0.1	1.6	1	1	0	1	1	1	1	ATPase	MipZ
NB-ARC	PF00931.22	gi|288560859|ref|YP_003424345.1|	-	0.0034	16.6	0.6	0.0055	15.9	0.6	1.2	1	0	0	1	1	1	1	NB-ARC	domain
RsgA_GTPase	PF03193.16	gi|288560859|ref|YP_003424345.1|	-	0.005	16.8	0.1	0.0098	15.8	0.1	1.5	1	0	0	1	1	1	1	RsgA	GTPase
CBP_BcsQ	PF06564.12	gi|288560859|ref|YP_003424345.1|	-	0.0065	16.0	0.0	0.36	10.3	0.1	2.2	2	0	0	2	2	2	1	Cellulose	biosynthesis	protein	BcsQ
SRP54	PF00448.22	gi|288560859|ref|YP_003424345.1|	-	0.012	15.3	0.0	0.022	14.4	0.0	1.5	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
APS_kinase	PF01583.20	gi|288560859|ref|YP_003424345.1|	-	0.024	14.5	0.0	0.036	14.0	0.0	1.3	1	0	0	1	1	1	0	Adenylylsulphate	kinase
AAA_30	PF13604.6	gi|288560859|ref|YP_003424345.1|	-	0.034	13.9	0.0	0.063	13.0	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.22	gi|288560859|ref|YP_003424345.1|	-	0.055	13.9	0.0	0.17	12.3	0.0	2.0	2	0	0	2	2	1	0	RNA	helicase
AAA_16	PF13191.6	gi|288560859|ref|YP_003424345.1|	-	0.06	13.7	0.0	0.096	13.1	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
Zeta_toxin	PF06414.12	gi|288560859|ref|YP_003424345.1|	-	0.12	11.7	0.0	0.19	11.0	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
AAA_18	PF13238.6	gi|288560859|ref|YP_003424345.1|	-	0.12	12.9	0.0	0.24	11.9	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
KTI12	PF08433.10	gi|288560859|ref|YP_003424345.1|	-	0.13	11.7	0.0	0.2	11.1	0.0	1.2	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
CLP1_P	PF16575.5	gi|288560859|ref|YP_003424345.1|	-	0.14	11.9	0.0	0.33	10.7	0.0	1.6	2	0	0	2	2	2	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
AAA_5	PF07728.14	gi|288560859|ref|YP_003424345.1|	-	0.18	11.8	0.0	0.32	11.0	0.0	1.5	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_22	PF13401.6	gi|288560859|ref|YP_003424345.1|	-	0.18	12.1	0.0	0.38	11.0	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_25	PF13481.6	gi|288560859|ref|YP_003424345.1|	-	0.21	11.2	0.4	0.29	10.7	0.4	1.4	1	1	0	1	1	1	0	AAA	domain
Big_1	PF02369.16	gi|288560860|ref|YP_003424346.1|	-	4.4e-34	116.3	38.3	4.7e-07	29.7	0.6	7.8	6	1	0	6	6	6	6	Bacterial	Ig-like	domain	(group	1)
Big_3_5	PF16640.5	gi|288560860|ref|YP_003424346.1|	-	1.9e-32	111.3	63.1	5.6e-06	26.5	1.9	6.9	6	0	0	6	6	6	6	Bacterial	Ig-like	domain	(group	3)
Invasin_D3	PF09134.10	gi|288560860|ref|YP_003424346.1|	-	9.6e-20	70.7	63.3	0.00047	20.4	2.6	7.4	4	2	2	6	6	6	6	Invasin,	domain	3
MG4	PF17789.1	gi|288560860|ref|YP_003424346.1|	-	6.2e-18	64.8	12.2	0.013	15.7	0.0	6.9	6	1	0	6	6	6	6	Macroglobulin	domain	MG4
Transglut_core	PF01841.19	gi|288560860|ref|YP_003424346.1|	-	1.5e-17	64.1	0.4	2.8e-17	63.2	0.4	1.5	1	0	0	1	1	1	1	Transglutaminase-like	superfamily
CarboxypepD_reg	PF13620.6	gi|288560860|ref|YP_003424346.1|	-	3.5e-14	52.8	27.7	0.048	13.9	0.2	6.7	6	0	0	6	6	6	6	Carboxypeptidase	regulatory-like	domain
PMBR	PF09373.10	gi|288560860|ref|YP_003424346.1|	-	0.00046	20.2	2.1	1	9.6	0.2	3.5	2	0	0	2	2	2	2	Pseudomurein-binding	repeat
DUF824	PF05688.11	gi|288560860|ref|YP_003424346.1|	-	0.0029	17.4	6.3	1.7	8.5	0.1	5.0	4	1	0	4	4	4	2	Salmonella	repeat	of	unknown	function	(DUF824)
AlcCBM31	PF11606.8	gi|288560860|ref|YP_003424346.1|	-	0.063	13.5	13.6	3	8.1	0.2	6.3	4	1	2	6	6	6	0	Family	31	carbohydrate	binding	protein
DUF4198	PF10670.9	gi|288560860|ref|YP_003424346.1|	-	0.12	12.7	7.5	1	9.7	0.1	5.1	7	0	0	7	7	7	0	Domain	of	unknown	function	(DUF4198)
FixH	PF05751.11	gi|288560860|ref|YP_003424346.1|	-	0.72	9.9	9.3	41	4.2	0.1	5.5	4	1	1	6	6	6	0	FixH
DUF4211	PF13926.6	gi|288560860|ref|YP_003424346.1|	-	1.2	9.2	4.2	1.9e+02	2.0	0.1	4.8	5	0	0	5	5	5	0	Domain	of	unknown	function	(DUF4211)
Apolipoprotein	PF01442.18	gi|288560861|ref|YP_003424347.1|	-	3.9e-12	46.5	1.6	3.9e-12	46.5	1.6	1.9	2	0	0	2	2	2	1	Apolipoprotein	A1/A4/E	domain
Phage_holin_4_2	PF04020.13	gi|288560861|ref|YP_003424347.1|	-	1.1e-09	38.9	23.1	2e-09	38.1	23.1	1.4	1	0	0	1	1	1	1	Mycobacterial	4	TMS	phage	holin,	superfamily	IV
Phosphodiest	PF01663.22	gi|288560861|ref|YP_003424347.1|	-	3.9e-09	36.6	4.3	5e-08	32.9	3.7	2.7	2	1	0	2	2	2	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
YtxH	PF12732.7	gi|288560861|ref|YP_003424347.1|	-	0.00062	20.2	17.8	50	4.5	17.8	3.8	1	1	0	1	1	1	0	YtxH-like	protein
ApoLp-III	PF07464.11	gi|288560861|ref|YP_003424347.1|	-	0.0027	17.8	5.7	0.0027	17.8	5.7	2.3	2	0	0	2	2	2	1	Apolipophorin-III	precursor	(apoLp-III)
MT0933_antitox	PF14013.6	gi|288560861|ref|YP_003424347.1|	-	0.0043	17.3	12.7	0.34	11.2	2.4	3.5	1	1	2	3	3	3	2	MT0933-like	antitoxin	protein
DUF1664	PF07889.12	gi|288560861|ref|YP_003424347.1|	-	0.0064	16.5	20.7	0.13	12.3	3.3	3.8	2	1	1	3	3	3	2	Protein	of	unknown	function	(DUF1664)
DUF1640	PF07798.11	gi|288560861|ref|YP_003424347.1|	-	0.03	14.4	22.6	0.033	14.3	15.7	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1640)
LEA_4	PF02987.16	gi|288560861|ref|YP_003424347.1|	-	0.038	14.1	16.1	0.25	11.4	2.3	3.9	1	1	4	5	5	5	0	Late	embryogenesis	abundant	protein
Phasin	PF05597.11	gi|288560861|ref|YP_003424347.1|	-	0.054	13.5	10.8	1.5	8.8	8.5	2.5	1	1	1	2	2	2	0	Poly(hydroxyalcanoate)	granule	associated	protein	(phasin)
DUF883	PF05957.13	gi|288560861|ref|YP_003424347.1|	-	0.074	13.7	8.0	0.76	10.4	1.6	2.7	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF883)
Exonuc_VII_L	PF02601.15	gi|288560861|ref|YP_003424347.1|	-	0.1	12.2	11.5	0.18	11.3	11.3	1.6	1	1	0	1	1	1	0	Exonuclease	VII,	large	subunit
Mt_ATP-synt_B	PF05405.14	gi|288560861|ref|YP_003424347.1|	-	0.27	10.9	9.9	0.21	11.2	7.2	2.1	1	1	0	1	1	1	0	Mitochondrial	ATP	synthase	B	chain	precursor	(ATP-synt_B)
Fzo_mitofusin	PF04799.13	gi|288560861|ref|YP_003424347.1|	-	0.31	10.6	8.0	3.6	7.1	5.7	2.7	1	1	1	2	2	2	0	fzo-like	conserved	region
DUF2884	PF11101.8	gi|288560861|ref|YP_003424347.1|	-	0.82	9.1	11.7	0.9	9.0	2.8	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2884)
LMP	PF04778.12	gi|288560861|ref|YP_003424347.1|	-	1.2	9.1	33.4	0.44	10.4	16.0	2.8	1	1	1	2	2	2	0	LMP	repeated	region
CdvA	PF18822.1	gi|288560861|ref|YP_003424347.1|	-	1.2	8.9	22.1	0.92	9.3	6.5	3.4	2	1	1	3	3	3	0	CdvA-like	coiled-coil	domain
Prominin	PF05478.11	gi|288560861|ref|YP_003424347.1|	-	2.4	6.0	12.9	2.4	6.0	11.9	1.4	1	1	0	1	1	1	0	Prominin
CR6_interact	PF10147.9	gi|288560861|ref|YP_003424347.1|	-	2.8	7.6	13.4	5.3	6.7	5.0	2.2	1	1	1	2	2	2	0	Growth	arrest	and	DNA-damage-inducible	proteins-interacting	protein	1
Baculo_PEP_C	PF04513.12	gi|288560861|ref|YP_003424347.1|	-	3.4	7.7	16.7	1.1	9.3	2.3	3.1	3	1	1	4	4	3	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
DUF1043	PF06295.12	gi|288560861|ref|YP_003424347.1|	-	3.6	7.6	7.9	21	5.1	8.1	2.3	2	0	0	2	2	1	0	Protein	of	unknown	function	(DUF1043)
Snapin_Pallidin	PF14712.6	gi|288560861|ref|YP_003424347.1|	-	8.6	6.9	10.8	73	3.9	10.0	2.7	1	1	1	2	2	2	0	Snapin/Pallidin
Atg14	PF10186.9	gi|288560861|ref|YP_003424347.1|	-	9.1	5.3	22.7	10	5.1	21.0	1.8	1	1	1	2	2	2	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
SpoIIIAH	PF12685.7	gi|288560862|ref|YP_003424348.1|	-	0.0082	16.0	6.8	0.01	15.7	6.8	1.2	1	0	0	1	1	1	1	SpoIIIAH-like	protein
Apt1	PF10351.9	gi|288560862|ref|YP_003424348.1|	-	0.063	12.1	23.4	0.067	12.0	23.4	1.0	1	0	0	1	1	1	0	Golgi-body	localisation	protein	domain
CytochromB561_N	PF09786.9	gi|288560862|ref|YP_003424348.1|	-	0.093	11.7	16.7	0.1	11.6	16.7	1.0	1	0	0	1	1	1	0	Cytochrome	B561,	N	terminal
DUF4834	PF16118.5	gi|288560862|ref|YP_003424348.1|	-	0.31	12.0	8.2	5.4	8.0	8.2	2.2	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4834)
Pex14_N	PF04695.13	gi|288560862|ref|YP_003424348.1|	-	0.52	11.0	8.9	1	10.0	8.9	1.6	1	0	0	1	1	1	0	Peroxisomal	membrane	anchor	protein	(Pex14p)	conserved	region
SOG2	PF10428.9	gi|288560862|ref|YP_003424348.1|	-	0.7	9.0	20.8	0.73	9.0	20.8	1.0	1	0	0	1	1	1	0	RAM	signalling	pathway	protein
Presenilin	PF01080.17	gi|288560862|ref|YP_003424348.1|	-	1.9	7.1	12.1	2.8	6.6	12.1	1.2	1	0	0	1	1	1	0	Presenilin
ASD2	PF08687.11	gi|288560862|ref|YP_003424348.1|	-	2.4	7.7	4.2	2.9	7.4	4.2	1.1	1	0	0	1	1	1	0	Apx/Shroom	domain	ASD2
HSD3	PF15244.6	gi|288560862|ref|YP_003424348.1|	-	2.4	7.6	18.4	2.9	7.3	18.4	1.2	1	0	0	1	1	1	0	Spermatogenesis-associated	protein	7,	or	HSD3
SPX	PF03105.19	gi|288560862|ref|YP_003424348.1|	-	2.4	8.0	25.8	2.9	7.7	25.8	1.1	1	0	0	1	1	1	0	SPX	domain
NPR3	PF03666.13	gi|288560862|ref|YP_003424348.1|	-	2.4	6.8	12.4	2.8	6.6	12.4	1.0	1	0	0	1	1	1	0	Nitrogen	Permease	regulator	of	amino	acid	transport	activity	3
BUD22	PF09073.10	gi|288560862|ref|YP_003424348.1|	-	2.8	7.2	19.9	4.5	6.5	19.9	1.3	1	0	0	1	1	1	0	BUD22
Hid1	PF12722.7	gi|288560862|ref|YP_003424348.1|	-	3	5.9	10.3	3.3	5.7	10.3	1.0	1	0	0	1	1	1	0	High-temperature-induced	dauer-formation	protein
MGC-24	PF05283.11	gi|288560862|ref|YP_003424348.1|	-	3.1	8.2	14.3	4.2	7.8	14.3	1.1	1	0	0	1	1	1	0	Multi-glycosylated	core	protein	24	(MGC-24),	sialomucin
DUF1180	PF06679.12	gi|288560862|ref|YP_003424348.1|	-	3.2	8.1	10.5	4.5	7.6	10.5	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1180)
QWRF	PF04484.12	gi|288560862|ref|YP_003424348.1|	-	5	6.8	21.0	5.7	6.6	21.0	1.0	1	0	0	1	1	1	0	QWRF	family
DUF4834	PF16118.5	gi|288560863|ref|YP_003424349.1|	-	0.59	11.1	3.3	12	6.9	3.3	2.1	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4834)
DDE_Tnp_1_6	PF13751.6	gi|288560864|ref|YP_003424350.1|	-	1.2e-19	70.8	1.1	5.1e-19	68.7	0.5	2.1	2	0	0	2	2	2	1	Transposase	DDE	domain
DDE_Tnp_1	PF01609.21	gi|288560864|ref|YP_003424350.1|	-	1.2e-11	44.6	0.8	7.4e-11	42.1	0.8	2.0	1	1	0	1	1	1	1	Transposase	DDE	domain
DUF772	PF05598.11	gi|288560864|ref|YP_003424350.1|	-	4.3e-06	26.7	0.0	1.1e-05	25.3	0.0	1.7	1	0	0	1	1	1	1	Transposase	domain	(DUF772)
FMN_red	PF03358.15	gi|288560865|ref|YP_003424351.1|	-	6.3e-26	91.0	0.0	8.3e-26	90.6	0.0	1.2	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.17	gi|288560865|ref|YP_003424351.1|	-	2.4e-07	30.7	0.0	2.9e-07	30.4	0.0	1.3	1	0	0	1	1	1	1	Flavodoxin-like	fold
FtsJ	PF01728.19	gi|288560866|ref|YP_003424352.1|	-	1.8e-17	64.0	0.0	2.6e-17	63.5	0.0	1.2	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
S4	PF01479.25	gi|288560866|ref|YP_003424352.1|	-	1.3e-11	44.1	0.3	2.5e-11	43.1	0.3	1.5	1	0	0	1	1	1	1	S4	domain
S4_2	PF13275.6	gi|288560866|ref|YP_003424352.1|	-	9.4e-06	25.4	0.2	2.8e-05	23.8	0.2	1.8	1	0	0	1	1	1	1	S4	domain
ThiS	PF02597.20	gi|288560866|ref|YP_003424352.1|	-	0.001	19.7	0.3	0.011	16.3	0.2	2.4	2	0	0	2	2	2	1	ThiS	family
Methyltransf_25	PF13649.6	gi|288560866|ref|YP_003424352.1|	-	0.23	12.2	0.8	0.85	10.4	0.4	2.3	2	1	0	2	2	2	0	Methyltransferase	domain
C_GCAxxG_C_C	PF09719.10	gi|288560867|ref|YP_003424353.1|	-	5.7e-21	75.0	3.7	6.9e-21	74.7	3.7	1.1	1	0	0	1	1	1	1	Putative	redox-active	protein	(C_GCAxxG_C_C)
PT-VENN	PF04829.13	gi|288560867|ref|YP_003424353.1|	-	0.087	12.9	1.4	1.5	8.9	1.3	2.1	2	0	0	2	2	2	0	Pre-toxin	domain	with	VENN	motif
DUF2559	PF10832.8	gi|288560867|ref|YP_003424353.1|	-	0.098	12.7	0.1	0.17	12.0	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2559)
DUF1289	PF06945.13	gi|288560867|ref|YP_003424353.1|	-	0.14	12.0	0.5	0.31	10.9	0.5	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1289)
E1-E2_ATPase	PF00122.20	gi|288560868|ref|YP_003424354.1|	-	5.4e-49	166.2	0.7	5.4e-49	166.2	0.7	2.8	3	0	0	3	3	3	1	E1-E2	ATPase
Hydrolase	PF00702.26	gi|288560868|ref|YP_003424354.1|	-	3.1e-40	138.7	0.0	5.2e-40	138.0	0.0	1.4	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.12	gi|288560868|ref|YP_003424354.1|	-	1.7e-05	24.7	2.6	0.00064	19.5	0.2	3.2	2	1	1	3	3	3	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.7	gi|288560868|ref|YP_003424354.1|	-	0.00069	20.1	0.0	0.0028	18.1	0.0	1.9	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
NAS	PF03059.16	gi|288560869|ref|YP_003424355.1|	-	5.2e-21	75.2	0.0	6.2e-21	75.0	0.0	1.1	1	0	0	1	1	1	1	Nicotianamine	synthase	protein
PCMT	PF01135.19	gi|288560869|ref|YP_003424355.1|	-	0.07	12.9	0.0	0.11	12.2	0.0	1.2	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
DUF3785	PF12653.7	gi|288560869|ref|YP_003424355.1|	-	0.13	12.4	0.5	0.41	10.8	0.1	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3785)
DOT1	PF08123.13	gi|288560869|ref|YP_003424355.1|	-	0.13	11.7	0.0	0.42	10.1	0.0	1.7	2	0	0	2	2	2	0	Histone	methylation	protein	DOT1
ABC_tran	PF00005.27	gi|288560870|ref|YP_003424356.1|	-	7.7e-21	75.1	0.0	1.2e-20	74.4	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
RsgA_GTPase	PF03193.16	gi|288560870|ref|YP_003424356.1|	-	0.00066	19.6	0.1	0.0013	18.7	0.1	1.4	1	0	0	1	1	1	1	RsgA	GTPase
AAA_22	PF13401.6	gi|288560870|ref|YP_003424356.1|	-	0.00093	19.5	0.5	0.0048	17.2	0.5	2.0	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.19	gi|288560870|ref|YP_003424356.1|	-	0.0011	18.5	0.4	0.1	12.0	0.0	2.1	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
AAA_30	PF13604.6	gi|288560870|ref|YP_003424356.1|	-	0.0031	17.3	0.0	0.0077	16.0	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.6	gi|288560870|ref|YP_003424356.1|	-	0.0082	15.9	0.8	0.058	13.1	0.1	2.2	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
Zeta_toxin	PF06414.12	gi|288560870|ref|YP_003424356.1|	-	0.0084	15.4	0.0	0.014	14.7	0.0	1.4	1	0	0	1	1	1	1	Zeta	toxin
AAA_18	PF13238.6	gi|288560870|ref|YP_003424356.1|	-	0.035	14.7	0.0	0.058	13.9	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_PrkA	PF08298.11	gi|288560870|ref|YP_003424356.1|	-	0.041	12.8	0.0	0.068	12.1	0.0	1.5	2	0	0	2	2	2	0	PrkA	AAA	domain
AAA_21	PF13304.6	gi|288560870|ref|YP_003424356.1|	-	0.083	12.7	0.1	0.13	12.0	0.1	1.6	1	1	1	2	2	2	0	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
PduV-EutP	PF10662.9	gi|288560870|ref|YP_003424356.1|	-	0.11	12.2	0.2	0.41	10.4	0.0	1.9	2	1	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
DUF815	PF05673.13	gi|288560870|ref|YP_003424356.1|	-	0.14	11.3	0.0	0.26	10.4	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
RNA_helicase	PF00910.22	gi|288560870|ref|YP_003424356.1|	-	0.15	12.5	0.0	0.3	11.5	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
AAA_16	PF13191.6	gi|288560870|ref|YP_003424356.1|	-	0.16	12.4	0.1	0.18	12.2	0.1	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
MeaB	PF03308.16	gi|288560870|ref|YP_003424356.1|	-	0.16	10.9	0.0	0.25	10.3	0.0	1.2	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
AAA_23	PF13476.6	gi|288560870|ref|YP_003424356.1|	-	0.24	11.9	0.6	0.41	11.1	0.1	1.5	2	0	0	2	2	2	0	AAA	domain
ABC_tran	PF00005.27	gi|288560871|ref|YP_003424357.1|	-	6.5e-23	81.8	0.0	1.1e-22	81.0	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.12	gi|288560871|ref|YP_003424357.1|	-	2e-11	44.2	0.1	3.6e-11	43.4	0.1	1.5	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
DUF2075	PF09848.9	gi|288560871|ref|YP_003424357.1|	-	0.0017	17.7	0.0	0.0025	17.1	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_16	PF13191.6	gi|288560871|ref|YP_003424357.1|	-	0.002	18.6	0.1	0.0038	17.6	0.1	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
SMC_N	PF02463.19	gi|288560871|ref|YP_003424357.1|	-	0.0036	16.8	0.4	0.029	13.8	0.4	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
Dynamin_N	PF00350.23	gi|288560871|ref|YP_003424357.1|	-	0.0041	17.2	0.6	0.014	15.4	0.6	1.9	1	1	0	1	1	1	1	Dynamin	family
Mg_chelatase	PF01078.21	gi|288560871|ref|YP_003424357.1|	-	0.0092	15.4	0.3	0.029	13.8	0.2	1.8	1	1	1	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
IstB_IS21	PF01695.17	gi|288560871|ref|YP_003424357.1|	-	0.012	15.3	0.0	0.02	14.6	0.0	1.3	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA_29	PF13555.6	gi|288560871|ref|YP_003424357.1|	-	0.013	15.2	0.2	0.026	14.3	0.2	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
DUF87	PF01935.17	gi|288560871|ref|YP_003424357.1|	-	0.016	15.3	0.4	0.089	12.9	0.1	2.2	2	0	0	2	2	2	0	Helicase	HerA,	central	domain
AAA_22	PF13401.6	gi|288560871|ref|YP_003424357.1|	-	0.021	15.1	0.3	0.16	12.2	0.3	2.2	1	1	0	1	1	1	0	AAA	domain
AAA_21	PF13304.6	gi|288560871|ref|YP_003424357.1|	-	0.036	13.9	0.3	2.7	7.7	0.0	2.2	1	1	1	2	2	2	0	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
EMP70	PF02990.16	gi|288560871|ref|YP_003424357.1|	-	0.051	12.2	0.0	0.066	11.9	0.0	1.1	1	0	0	1	1	1	0	Endomembrane	protein	70
DUF2620	PF10941.8	gi|288560871|ref|YP_003424357.1|	-	0.062	13.4	0.0	0.77	9.9	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF2620
PhoH	PF02562.16	gi|288560871|ref|YP_003424357.1|	-	0.07	12.6	0.0	0.11	12.0	0.0	1.4	1	0	0	1	1	1	0	PhoH-like	protein
RsgA_GTPase	PF03193.16	gi|288560871|ref|YP_003424357.1|	-	0.07	13.0	0.1	0.15	11.9	0.1	1.6	1	0	0	1	1	1	0	RsgA	GTPase
BPD_transp_1	PF00528.22	gi|288560872|ref|YP_003424358.1|	-	4.4e-19	68.9	12.7	4.4e-19	68.9	12.7	2.1	1	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.22	gi|288560873|ref|YP_003424359.1|	-	3.7e-41	140.9	10.5	3.7e-41	140.9	10.5	2.2	2	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
SBP_bac_5	PF00496.22	gi|288560874|ref|YP_003424360.1|	-	6.3e-72	242.6	9.6	8.3e-72	242.2	9.6	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
DUF3098	PF11297.8	gi|288560874|ref|YP_003424360.1|	-	0.28	10.8	0.9	0.55	9.9	0.9	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3098)
MCH	PF02289.16	gi|288560875|ref|YP_003424361.1|	-	5.6e-127	423.3	0.2	6.2e-127	423.2	0.2	1.0	1	0	0	1	1	1	1	Cyclohydrolase	(MCH)
Luteo_P1-P2	PF08467.10	gi|288560875|ref|YP_003424361.1|	-	0.012	14.9	0.0	0.02	14.1	0.0	1.3	1	0	0	1	1	1	0	Luteovirus	RNA	polymerase	P1-P2/replicase
Meth_synt_2	PF01717.18	gi|288560876|ref|YP_003424362.1|	-	3.4e-51	174.4	0.0	4.3e-51	174.1	0.0	1.1	1	0	0	1	1	1	1	Cobalamin-independent	synthase,	Catalytic	domain
URO-D	PF01208.17	gi|288560876|ref|YP_003424362.1|	-	0.00036	19.8	0.0	0.00056	19.2	0.0	1.3	1	0	0	1	1	1	1	Uroporphyrinogen	decarboxylase	(URO-D)
Meth_synt_1	PF08267.12	gi|288560876|ref|YP_003424362.1|	-	0.0097	15.5	0.0	0.014	14.9	0.0	1.2	1	0	0	1	1	1	1	Cobalamin-independent	synthase,	N-terminal	domain
betaPIX_CC	PF16523.5	gi|288560876|ref|YP_003424362.1|	-	0.028	14.3	0.1	3.2	7.7	0.1	2.3	1	1	1	2	2	2	0	betaPIX	coiled	coil
DUF1894	PF08979.11	gi|288560877|ref|YP_003424363.1|	-	3.7e-32	110.5	0.3	4.3e-32	110.3	0.3	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1894)
DUF1890	PF09001.11	gi|288560878|ref|YP_003424364.1|	-	1.6e-52	177.6	0.0	1.8e-52	177.4	0.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1890)
Metallophos_2	PF12850.7	gi|288560879|ref|YP_003424365.1|	-	4e-31	108.4	0.0	4.7e-31	108.2	0.0	1.0	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.28	gi|288560879|ref|YP_003424365.1|	-	6e-05	23.6	0.1	0.019	15.5	0.1	2.3	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
zf-ribbon_3	PF13248.6	gi|288560880|ref|YP_003424366.1|	-	0.00013	21.3	1.8	0.065	12.7	0.1	2.2	2	0	0	2	2	2	2	zinc-ribbon	domain
DZR	PF12773.7	gi|288560880|ref|YP_003424366.1|	-	0.0044	17.0	0.1	0.0052	16.8	0.1	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
TF_Zn_Ribbon	PF08271.12	gi|288560880|ref|YP_003424366.1|	-	0.014	14.9	0.9	0.1	12.1	0.9	1.9	1	1	0	1	1	1	0	TFIIB	zinc-binding
zinc_ribbon_2	PF13240.6	gi|288560880|ref|YP_003424366.1|	-	0.015	15.0	4.4	0.49	10.2	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
UPF0547	PF10571.9	gi|288560880|ref|YP_003424366.1|	-	0.11	12.6	2.2	0.86	9.7	0.1	2.1	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
Rad50_zn_hook	PF04423.14	gi|288560880|ref|YP_003424366.1|	-	0.39	10.6	0.6	0.49	10.3	0.6	1.1	1	0	0	1	1	1	0	Rad50	zinc	hook	motif
HscB_4_cys	PF18256.1	gi|288560880|ref|YP_003424366.1|	-	1	9.2	9.5	0.25	11.2	4.2	2.2	2	2	0	2	2	2	0	Co-chaperone	HscB	tetracysteine	metal	binding	motif
Rad50_zn_hook	PF04423.14	gi|288560881|ref|YP_003424367.1|	-	0.017	15.0	3.4	0.042	13.7	2.2	1.9	1	1	1	2	2	2	0	Rad50	zinc	hook	motif
YhfH	PF14149.6	gi|288560881|ref|YP_003424367.1|	-	0.025	14.5	2.3	0.1	12.6	2.3	1.9	1	1	0	1	1	1	0	YhfH-like	protein
DNA_ligase_ZBD	PF03119.16	gi|288560881|ref|YP_003424367.1|	-	0.031	14.3	0.6	0.031	14.3	0.6	1.9	1	1	1	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
DZR	PF12773.7	gi|288560881|ref|YP_003424367.1|	-	0.041	13.9	2.9	0.053	13.5	2.9	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
zf-WRNIP1_ubi	PF18279.1	gi|288560881|ref|YP_003424367.1|	-	0.13	13.0	2.1	9.8	7.1	0.2	2.2	2	0	0	2	2	2	0	Werner	helicase-interacting	protein	1	ubiquitin-binding	domain
HscB_4_cys	PF18256.1	gi|288560881|ref|YP_003424367.1|	-	0.13	12.1	2.2	0.13	12.1	2.2	2.1	2	0	0	2	2	2	0	Co-chaperone	HscB	tetracysteine	metal	binding	motif
OrfB_Zn_ribbon	PF07282.11	gi|288560881|ref|YP_003424367.1|	-	0.16	12.0	1.3	0.18	11.7	1.3	1.3	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
zf-ribbon_3	PF13248.6	gi|288560881|ref|YP_003424367.1|	-	0.27	10.7	5.3	0.9	9.0	0.2	2.5	1	1	1	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.6	gi|288560881|ref|YP_003424367.1|	-	0.61	9.9	0.4	0.61	9.9	0.4	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF4065	PF13274.6	gi|288560882|ref|YP_003424368.1|	-	2.3e-08	34.9	0.8	3.1e-08	34.5	0.8	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4065)
ABC_tran	PF00005.27	gi|288560883|ref|YP_003424369.1|	-	1.1e-33	116.7	0.2	2.3e-33	115.6	0.2	1.6	1	0	0	1	1	1	1	ABC	transporter
ABC_membrane	PF00664.23	gi|288560883|ref|YP_003424369.1|	-	4.9e-31	108.4	25.0	6.6e-31	108.0	25.0	1.2	1	0	0	1	1	1	1	ABC	transporter	transmembrane	region
SMC_N	PF02463.19	gi|288560883|ref|YP_003424369.1|	-	8.9e-07	28.6	10.6	2e-05	24.2	10.6	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
RsgA_GTPase	PF03193.16	gi|288560883|ref|YP_003424369.1|	-	6.7e-05	22.9	0.0	0.00018	21.5	0.0	1.7	1	0	0	1	1	1	1	RsgA	GTPase
AAA_15	PF13175.6	gi|288560883|ref|YP_003424369.1|	-	0.00018	21.3	1.9	0.00029	20.7	0.3	2.1	2	1	0	2	2	2	1	AAA	ATPase	domain
AAA_29	PF13555.6	gi|288560883|ref|YP_003424369.1|	-	0.0005	19.7	1.3	0.0011	18.7	0.4	2.0	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
AAA_21	PF13304.6	gi|288560883|ref|YP_003424369.1|	-	0.0061	16.4	0.0	0.017	14.9	0.0	1.9	1	0	0	1	1	1	1	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
T2SSE	PF00437.20	gi|288560883|ref|YP_003424369.1|	-	0.016	14.3	0.1	0.029	13.4	0.1	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
Mating_N	PF12731.7	gi|288560883|ref|YP_003424369.1|	-	0.041	14.0	0.1	0.14	12.3	0.1	1.9	2	0	0	2	2	2	0	Mating-type	protein	beta	1
Zeta_toxin	PF06414.12	gi|288560883|ref|YP_003424369.1|	-	0.098	11.9	0.1	0.76	9.0	0.0	2.1	2	0	0	2	2	2	0	Zeta	toxin
ATP-synt_ab	PF00006.25	gi|288560883|ref|YP_003424369.1|	-	0.11	12.1	0.3	0.38	10.4	0.2	1.8	1	1	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_23	PF13476.6	gi|288560883|ref|YP_003424369.1|	-	0.13	12.7	15.1	0.78	10.2	12.9	2.9	2	1	0	2	2	2	0	AAA	domain
Glyco_hydro_114	PF03537.13	gi|288560883|ref|YP_003424369.1|	-	0.15	11.3	0.0	0.23	10.7	0.0	1.2	1	0	0	1	1	1	0	Glycoside-hydrolase	family	GH114
PDR_assoc	PF08370.11	gi|288560883|ref|YP_003424369.1|	-	0.2	11.4	0.1	0.2	11.4	0.1	2.7	3	0	0	3	3	2	0	Plant	PDR	ABC	transporter	associated
FtsK_SpoIIIE	PF01580.18	gi|288560883|ref|YP_003424369.1|	-	0.22	10.9	1.8	0.29	10.5	0.2	1.9	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
DUF87	PF01935.17	gi|288560883|ref|YP_003424369.1|	-	0.29	11.2	4.1	1.2	9.2	4.1	2.1	1	1	0	1	1	1	0	Helicase	HerA,	central	domain
DUF2254	PF10011.9	gi|288560883|ref|YP_003424369.1|	-	1.6	7.5	6.4	0.12	11.2	1.0	1.8	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2254)
ABC_membrane	PF00664.23	gi|288560884|ref|YP_003424370.1|	-	4.1e-54	184.1	19.1	7.5e-54	183.2	19.1	1.4	1	0	0	1	1	1	1	ABC	transporter	transmembrane	region
ABC_tran	PF00005.27	gi|288560884|ref|YP_003424370.1|	-	5.9e-32	111.1	0.2	1.8e-31	109.5	0.2	1.9	1	0	0	1	1	1	1	ABC	transporter
ABC_membrane_2	PF06472.15	gi|288560884|ref|YP_003424370.1|	-	4.9e-06	26.2	8.4	4.9e-06	26.2	8.4	1.7	2	0	0	2	2	2	1	ABC	transporter	transmembrane	region	2
AAA_22	PF13401.6	gi|288560884|ref|YP_003424370.1|	-	1.4e-05	25.3	0.8	0.00022	21.5	0.8	2.5	1	1	0	1	1	1	1	AAA	domain
ABC_membrane_3	PF13748.6	gi|288560884|ref|YP_003424370.1|	-	0.00029	20.2	10.2	0.002	17.4	10.2	2.3	1	1	0	1	1	1	1	ABC	transporter	transmembrane	region
RsgA_GTPase	PF03193.16	gi|288560884|ref|YP_003424370.1|	-	0.0015	18.4	0.1	0.0033	17.3	0.1	1.5	1	0	0	1	1	1	1	RsgA	GTPase
AAA_24	PF13479.6	gi|288560884|ref|YP_003424370.1|	-	0.002	17.9	1.4	0.0057	16.4	1.3	1.9	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.19	gi|288560884|ref|YP_003424370.1|	-	0.0021	17.6	7.0	0.0043	16.5	2.5	2.2	1	1	1	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
AAA	PF00004.29	gi|288560884|ref|YP_003424370.1|	-	0.0072	16.7	2.2	0.067	13.6	2.2	2.3	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_7	PF12775.7	gi|288560884|ref|YP_003424370.1|	-	0.0085	15.6	0.3	0.026	14.1	0.0	1.9	2	0	0	2	2	2	1	P-loop	containing	dynein	motor	region
AAA_18	PF13238.6	gi|288560884|ref|YP_003424370.1|	-	0.0088	16.6	0.2	0.047	14.2	0.1	2.2	1	1	1	2	2	2	1	AAA	domain
Zeta_toxin	PF06414.12	gi|288560884|ref|YP_003424370.1|	-	0.0093	15.3	0.1	0.9	8.8	0.0	2.4	2	0	0	2	2	2	1	Zeta	toxin
AAA_21	PF13304.6	gi|288560884|ref|YP_003424370.1|	-	0.01	15.7	0.7	4.4	7.0	0.0	3.3	2	1	0	3	3	3	0	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
DEAD	PF00270.29	gi|288560884|ref|YP_003424370.1|	-	0.012	15.4	3.4	0.037	13.8	3.4	1.8	1	1	0	1	1	1	0	DEAD/DEAH	box	helicase
TsaE	PF02367.17	gi|288560884|ref|YP_003424370.1|	-	0.013	15.5	0.0	0.032	14.2	0.0	1.6	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
DUF87	PF01935.17	gi|288560884|ref|YP_003424370.1|	-	0.016	15.3	0.3	0.016	15.3	0.3	2.7	3	0	0	3	3	2	0	Helicase	HerA,	central	domain
Roc	PF08477.13	gi|288560884|ref|YP_003424370.1|	-	0.017	15.4	0.3	0.052	13.8	0.1	1.9	2	0	0	2	2	1	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
AAA_30	PF13604.6	gi|288560884|ref|YP_003424370.1|	-	0.021	14.6	1.5	0.36	10.5	1.5	2.4	1	1	0	1	1	1	0	AAA	domain
TniB	PF05621.11	gi|288560884|ref|YP_003424370.1|	-	0.022	14.2	0.4	0.7	9.3	0.0	2.3	2	0	0	2	2	2	0	Bacterial	TniB	protein
AAA_16	PF13191.6	gi|288560884|ref|YP_003424370.1|	-	0.027	14.9	0.2	0.12	12.7	0.2	2.1	1	1	0	1	1	1	0	AAA	ATPase	domain
IstB_IS21	PF01695.17	gi|288560884|ref|YP_003424370.1|	-	0.027	14.2	1.5	1.1	9.0	0.0	2.3	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
ATP-synt_ab	PF00006.25	gi|288560884|ref|YP_003424370.1|	-	0.035	13.8	0.0	0.059	13.0	0.0	1.5	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
NTPase_1	PF03266.15	gi|288560884|ref|YP_003424370.1|	-	0.041	13.8	1.0	0.22	11.4	0.0	2.3	2	0	0	2	2	2	0	NTPase
NB-ARC	PF00931.22	gi|288560884|ref|YP_003424370.1|	-	0.062	12.5	1.6	0.25	10.5	1.5	1.9	1	1	0	1	1	1	0	NB-ARC	domain
AAA_29	PF13555.6	gi|288560884|ref|YP_003424370.1|	-	0.095	12.5	0.2	0.22	11.3	0.2	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_19	PF13245.6	gi|288560884|ref|YP_003424370.1|	-	0.13	12.6	0.6	0.45	10.8	0.6	1.9	1	1	0	1	1	1	0	AAA	domain
ResIII	PF04851.15	gi|288560884|ref|YP_003424370.1|	-	0.16	12.0	2.6	0.41	10.6	0.1	2.6	2	1	1	3	3	3	0	Type	III	restriction	enzyme,	res	subunit
AAA_14	PF13173.6	gi|288560884|ref|YP_003424370.1|	-	0.3	11.1	3.8	13	5.8	0.9	3.0	1	1	1	2	2	2	0	AAA	domain
AAA_23	PF13476.6	gi|288560884|ref|YP_003424370.1|	-	2.3	8.7	13.8	3.7	8.0	7.8	2.9	2	1	0	2	2	2	0	AAA	domain
MarR	PF01047.22	gi|288560885|ref|YP_003424371.1|	-	9.7e-12	44.6	0.6	1.6e-11	44.0	0.6	1.4	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.6	gi|288560885|ref|YP_003424371.1|	-	1.2e-07	32.1	0.1	2.1e-07	31.3	0.1	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.7	gi|288560885|ref|YP_003424371.1|	-	1.8e-07	31.0	0.0	2.7e-07	30.4	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.6	gi|288560885|ref|YP_003424371.1|	-	3.4e-07	29.7	2.2	5.9e-07	29.0	0.6	2.1	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_34	PF13601.6	gi|288560885|ref|YP_003424371.1|	-	4.6e-07	29.9	1.2	1.1e-06	28.8	0.3	1.9	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.19	gi|288560885|ref|YP_003424371.1|	-	4.5e-06	26.5	0.6	1e-05	25.3	0.6	1.6	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
Fe_dep_repress	PF01325.19	gi|288560885|ref|YP_003424371.1|	-	5e-06	26.6	0.3	9.6e-06	25.7	0.3	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_DeoR	PF08220.12	gi|288560885|ref|YP_003424371.1|	-	0.00021	20.9	0.1	0.00049	19.8	0.1	1.6	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
HTH_Crp_2	PF13545.6	gi|288560885|ref|YP_003424371.1|	-	0.00028	20.8	0.1	0.00052	19.9	0.1	1.5	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_5	PF01022.20	gi|288560885|ref|YP_003424371.1|	-	0.00028	20.7	0.4	0.00053	19.8	0.4	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HxlR	PF01638.17	gi|288560885|ref|YP_003424371.1|	-	0.00032	20.5	0.6	0.00057	19.7	0.6	1.4	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_11	PF08279.12	gi|288560885|ref|YP_003424371.1|	-	0.00041	20.3	0.5	0.00082	19.3	0.5	1.4	1	0	0	1	1	1	1	HTH	domain
GntR	PF00392.21	gi|288560885|ref|YP_003424371.1|	-	0.00061	19.4	0.0	0.0011	18.6	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HTH_20	PF12840.7	gi|288560885|ref|YP_003424371.1|	-	0.0041	17.1	0.0	0.0084	16.1	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.12	gi|288560885|ref|YP_003424371.1|	-	0.0098	15.5	0.0	0.023	14.4	0.0	1.6	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_Mga	PF08280.11	gi|288560885|ref|YP_003424371.1|	-	0.012	15.6	2.2	0.012	15.6	2.2	2.3	1	1	1	2	2	2	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
DUF4413	PF14372.6	gi|288560885|ref|YP_003424371.1|	-	0.021	15.2	3.7	1.2	9.6	0.3	2.6	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4413)
Rrf2	PF02082.20	gi|288560885|ref|YP_003424371.1|	-	0.024	15.0	0.2	0.045	14.1	0.2	1.4	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_10	PF04967.12	gi|288560885|ref|YP_003424371.1|	-	0.026	14.3	0.1	0.046	13.5	0.1	1.4	1	0	0	1	1	1	0	HTH	DNA	binding	domain
HTH_23	PF13384.6	gi|288560885|ref|YP_003424371.1|	-	0.03	14.1	0.0	0.079	12.8	0.0	1.6	2	0	0	2	2	1	0	Homeodomain-like	domain
HTH_AsnC-type	PF13404.6	gi|288560885|ref|YP_003424371.1|	-	0.055	13.3	0.2	0.16	11.8	0.1	1.8	2	0	0	2	2	2	0	AsnC-type	helix-turn-helix	domain
B-block_TFIIIC	PF04182.12	gi|288560885|ref|YP_003424371.1|	-	0.13	12.5	1.7	0.17	12.1	0.5	1.9	2	0	0	2	2	2	0	B-block	binding	subunit	of	TFIIIC
Ribosomal_S25	PF03297.15	gi|288560885|ref|YP_003424371.1|	-	0.3	11.3	0.1	0.3	11.3	0.1	2.7	2	1	0	3	3	3	0	S25	ribosomal	protein
adh_short_C2	PF13561.6	gi|288560886|ref|YP_003424372.1|	-	4e-57	193.5	0.5	4.8e-57	193.2	0.5	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.25	gi|288560886|ref|YP_003424372.1|	-	1.9e-55	187.4	1.0	2.2e-55	187.1	1.0	1.0	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.10	gi|288560886|ref|YP_003424372.1|	-	6.7e-18	65.2	0.1	8.3e-18	64.9	0.1	1.1	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.21	gi|288560886|ref|YP_003424372.1|	-	9e-05	22.0	0.1	0.00012	21.7	0.1	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
NanE	PF04131.14	gi|288560886|ref|YP_003424372.1|	-	0.018	14.2	0.0	0.029	13.6	0.0	1.3	1	0	0	1	1	1	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
DIT1_PvcA	PF05141.12	gi|288560886|ref|YP_003424372.1|	-	0.027	13.9	0.1	0.036	13.5	0.1	1.1	1	0	0	1	1	1	0	Pyoverdine/dityrosine	biosynthesis	protein
HNOB	PF07700.15	gi|288560886|ref|YP_003424372.1|	-	0.048	13.6	0.1	0.072	13.0	0.1	1.2	1	0	0	1	1	1	0	Haem-NO-binding
Spore_IV_A	PF09547.10	gi|288560886|ref|YP_003424372.1|	-	0.094	11.6	0.0	0.16	10.9	0.0	1.3	1	0	0	1	1	1	0	Stage	IV	sporulation	protein	A	(spore_IV_A)
NAD_binding_4	PF07993.12	gi|288560886|ref|YP_003424372.1|	-	0.097	11.8	0.1	0.22	10.7	0.1	1.6	1	1	0	1	1	1	0	Male	sterility	protein
PqqD	PF05402.12	gi|288560886|ref|YP_003424372.1|	-	0.11	12.8	1.0	0.34	11.2	0.2	2.2	2	1	0	2	2	2	0	Coenzyme	PQQ	synthesis	protein	D	(PqqD)
PMSR	PF01625.21	gi|288560886|ref|YP_003424372.1|	-	0.13	12.4	0.0	6.6	6.9	0.0	2.1	2	0	0	2	2	2	0	Peptide	methionine	sulfoxide	reductase
DUF354	PF04007.12	gi|288560887|ref|YP_003424373.1|	-	2.7e-156	519.8	1.1	3.3e-156	519.6	1.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF354)
Epimerase_2	PF02350.19	gi|288560887|ref|YP_003424373.1|	-	0.015	14.1	0.0	0.022	13.6	0.0	1.1	1	0	0	1	1	1	0	UDP-N-acetylglucosamine	2-epimerase
LpxB	PF02684.15	gi|288560887|ref|YP_003424373.1|	-	0.031	13.1	0.0	0.047	12.5	0.0	1.2	1	0	0	1	1	1	0	Lipid-A-disaccharide	synthetase
cobW	PF02492.19	gi|288560888|ref|YP_003424374.1|	-	2.2e-27	95.8	1.0	3.4e-27	95.2	1.0	1.3	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
MeaB	PF03308.16	gi|288560888|ref|YP_003424374.1|	-	6e-10	38.6	0.7	9.8e-07	28.0	0.2	2.1	2	0	0	2	2	2	2	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
RsgA_GTPase	PF03193.16	gi|288560888|ref|YP_003424374.1|	-	0.00036	20.5	0.1	0.52	10.2	0.0	2.2	2	0	0	2	2	2	2	RsgA	GTPase
NB-ARC	PF00931.22	gi|288560888|ref|YP_003424374.1|	-	0.015	14.5	0.0	0.029	13.5	0.0	1.4	1	0	0	1	1	1	0	NB-ARC	domain
ATPase_2	PF01637.18	gi|288560888|ref|YP_003424374.1|	-	0.015	15.2	0.0	0.022	14.7	0.0	1.3	1	0	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
FeoB_N	PF02421.18	gi|288560888|ref|YP_003424374.1|	-	0.023	14.2	0.6	1.1	8.7	0.2	2.3	2	0	0	2	2	2	0	Ferrous	iron	transport	protein	B
AAA_16	PF13191.6	gi|288560888|ref|YP_003424374.1|	-	0.048	14.1	0.0	0.077	13.4	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
TsaE	PF02367.17	gi|288560888|ref|YP_003424374.1|	-	0.065	13.2	0.0	0.12	12.3	0.0	1.4	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
ATP_bind_1	PF03029.17	gi|288560888|ref|YP_003424374.1|	-	0.11	12.2	0.1	6.8	6.4	0.0	2.2	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
AAA_7	PF12775.7	gi|288560888|ref|YP_003424374.1|	-	0.22	11.0	0.0	0.32	10.5	0.0	1.2	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
MobB	PF03205.14	gi|288560888|ref|YP_003424374.1|	-	0.23	11.4	0.0	0.23	11.4	0.0	2.4	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
SelP_N	PF04592.14	gi|288560888|ref|YP_003424374.1|	-	0.46	9.8	19.9	0.65	9.4	19.9	1.2	1	0	0	1	1	1	0	Selenoprotein	P,	N	terminal	region
HypA	PF01155.19	gi|288560889|ref|YP_003424375.1|	-	2.5e-28	98.3	2.7	2.8e-28	98.2	2.7	1.0	1	0	0	1	1	1	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Anti-TRAP	PF15777.5	gi|288560889|ref|YP_003424375.1|	-	0.0019	18.1	0.1	0.0031	17.4	0.1	1.3	1	0	0	1	1	1	1	Tryptophan	RNA-binding	attenuator	protein	inhibitory	protein
Zn-ribbon_8	PF09723.10	gi|288560889|ref|YP_003424375.1|	-	0.0072	16.4	0.9	0.013	15.6	0.9	1.4	1	0	0	1	1	1	1	Zinc	ribbon	domain
zinc_ribbon_9	PF14369.6	gi|288560889|ref|YP_003424375.1|	-	0.051	13.8	3.7	0.12	12.7	3.7	1.6	1	0	0	1	1	1	0	zinc-ribbon
Zn_Tnp_IS1	PF03811.13	gi|288560889|ref|YP_003424375.1|	-	0.051	13.3	0.6	0.3	10.8	0.1	2.1	2	0	0	2	2	2	0	InsA	N-terminal	domain
DUF4791	PF16039.5	gi|288560889|ref|YP_003424375.1|	-	0.12	11.9	0.3	0.17	11.4	0.3	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4791)
Pribosyltran_N	PF13793.6	gi|288560890|ref|YP_003424376.1|	-	3.5e-29	101.1	0.0	2.9e-28	98.1	0.0	2.2	2	1	0	2	2	2	1	N-terminal	domain	of	ribose	phosphate	pyrophosphokinase
Pribosyltran	PF00156.27	gi|288560890|ref|YP_003424376.1|	-	4e-22	78.4	2.3	1.5e-21	76.5	1.8	2.1	2	0	0	2	2	2	1	Phosphoribosyl	transferase	domain
Pribosyl_synth	PF14572.6	gi|288560890|ref|YP_003424376.1|	-	2.3e-08	34.3	3.8	5e-08	33.2	3.8	1.5	1	0	0	1	1	1	1	Phosphoribosyl	synthetase-associated	domain
UPRTase	PF14681.6	gi|288560890|ref|YP_003424376.1|	-	2.9e-07	30.1	0.5	4.8e-07	29.4	0.5	1.4	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
PRTase_2	PF15609.6	gi|288560890|ref|YP_003424376.1|	-	0.0045	16.5	0.2	0.011	15.3	0.2	1.7	1	1	0	1	1	1	1	Phosphoribosyl	transferase
Flavokinase	PF01687.17	gi|288560890|ref|YP_003424376.1|	-	0.0052	17.1	0.0	1.9	8.8	0.0	2.4	2	0	0	2	2	2	2	Riboflavin	kinase
Otopetrin	PF03189.13	gi|288560891|ref|YP_003424377.1|	-	3.1	6.5	8.2	0.092	11.5	1.3	1.9	2	0	0	2	2	2	0	Otopetrin
Lon_C	PF05362.13	gi|288560893|ref|YP_003424379.1|	-	3.8e-29	101.7	4.6	6.5e-29	100.9	4.6	1.3	1	0	0	1	1	1	1	Lon	protease	(S16)	C-terminal	proteolytic	domain
AAA_32	PF13654.6	gi|288560893|ref|YP_003424379.1|	-	9.4e-22	77.5	0.0	2.6e-17	62.8	0.0	2.3	2	0	0	2	2	2	2	AAA	domain
Sigma54_activat	PF00158.26	gi|288560893|ref|YP_003424379.1|	-	4.1e-16	59.1	0.4	1.8e-09	37.5	0.1	2.7	2	1	0	2	2	2	2	Sigma-54	interaction	domain
Mg_chelatase	PF01078.21	gi|288560893|ref|YP_003424379.1|	-	4.7e-14	52.3	0.1	6.4e-08	32.2	0.0	2.7	3	0	0	3	3	3	2	Magnesium	chelatase,	subunit	ChlI
MCM	PF00493.23	gi|288560893|ref|YP_003424379.1|	-	1.2e-09	37.6	0.0	0.0017	17.5	0.0	2.4	2	0	0	2	2	2	2	MCM	P-loop	domain
AAA_5	PF07728.14	gi|288560893|ref|YP_003424379.1|	-	2.4e-09	37.3	0.0	0.00066	19.7	0.0	2.6	2	0	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
ChlI	PF13541.6	gi|288560893|ref|YP_003424379.1|	-	2.9e-08	33.6	0.8	6.7e-08	32.4	0.8	1.7	1	0	0	1	1	1	1	Subunit	ChlI	of	Mg-chelatase
Sigma54_activ_2	PF14532.6	gi|288560893|ref|YP_003424379.1|	-	1.4e-06	28.5	0.0	0.091	12.9	0.0	2.6	2	0	0	2	2	2	2	Sigma-54	interaction	domain
AAA	PF00004.29	gi|288560893|ref|YP_003424379.1|	-	4.2e-05	24.0	0.0	0.037	14.5	0.0	2.8	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.12	gi|288560893|ref|YP_003424379.1|	-	7.4e-05	22.5	0.1	0.27	11.0	0.0	2.9	3	0	0	3	3	3	2	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_3	PF07726.11	gi|288560893|ref|YP_003424379.1|	-	0.0001	22.1	0.1	0.026	14.4	0.0	2.5	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.6	gi|288560893|ref|YP_003424379.1|	-	0.00014	22.1	0.0	0.0046	17.2	0.0	2.6	2	0	0	2	2	2	1	AAA	domain
AAA_24	PF13479.6	gi|288560893|ref|YP_003424379.1|	-	0.00046	20.0	0.5	0.33	10.7	0.0	3.0	3	0	0	3	3	3	1	AAA	domain
AAA_7	PF12775.7	gi|288560893|ref|YP_003424379.1|	-	0.0015	18.1	0.1	0.0059	16.1	0.0	2.0	2	0	0	2	2	2	1	P-loop	containing	dynein	motor	region
AAA_16	PF13191.6	gi|288560893|ref|YP_003424379.1|	-	0.0021	18.5	0.0	0.0055	17.1	0.0	1.7	1	0	0	1	1	1	1	AAA	ATPase	domain
NTPase_1	PF03266.15	gi|288560893|ref|YP_003424379.1|	-	0.0031	17.4	0.0	0.73	9.7	0.0	2.9	2	0	0	2	2	2	1	NTPase
AAA_30	PF13604.6	gi|288560893|ref|YP_003424379.1|	-	0.0037	17.0	0.0	2.2	8.0	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
AAA_19	PF13245.6	gi|288560893|ref|YP_003424379.1|	-	0.006	16.9	0.0	4.6	7.6	0.0	2.6	2	0	0	2	2	2	1	AAA	domain
IstB_IS21	PF01695.17	gi|288560893|ref|YP_003424379.1|	-	0.0088	15.8	0.0	0.052	13.3	0.0	2.1	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
TniB	PF05621.11	gi|288560893|ref|YP_003424379.1|	-	0.017	14.5	0.1	0.14	11.6	0.0	2.4	3	0	0	3	3	3	0	Bacterial	TniB	protein
2HCT	PF03390.15	gi|288560893|ref|YP_003424379.1|	-	0.019	13.6	0.3	0.03	12.9	0.3	1.2	1	0	0	1	1	1	0	2-hydroxycarboxylate	transporter	family
NACHT	PF05729.12	gi|288560893|ref|YP_003424379.1|	-	0.025	14.5	0.0	0.056	13.4	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
RsgA_GTPase	PF03193.16	gi|288560893|ref|YP_003424379.1|	-	0.031	14.2	0.0	0.1	12.5	0.0	1.9	1	0	0	1	1	1	0	RsgA	GTPase
AAA_29	PF13555.6	gi|288560893|ref|YP_003424379.1|	-	0.056	13.2	0.0	0.19	11.5	0.0	1.8	2	0	0	2	2	1	0	P-loop	containing	region	of	AAA	domain
HIRA_B	PF09453.10	gi|288560893|ref|YP_003424379.1|	-	0.074	12.9	0.5	0.17	11.8	0.5	1.6	1	0	0	1	1	1	0	HIRA	B	motif
AAA_18	PF13238.6	gi|288560893|ref|YP_003424379.1|	-	0.077	13.5	0.9	0.5	10.9	0.0	2.9	4	0	0	4	4	2	0	AAA	domain
ABC_tran	PF00005.27	gi|288560893|ref|YP_003424379.1|	-	0.085	13.4	0.2	0.42	11.1	0.0	2.4	2	0	0	2	2	1	0	ABC	transporter
AAA_33	PF13671.6	gi|288560893|ref|YP_003424379.1|	-	0.16	12.1	0.0	0.33	11.1	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
GATase_3	PF07685.14	gi|288560894|ref|YP_003424380.1|	-	2.4e-50	170.9	0.4	4.6e-50	169.9	0.4	1.5	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
CbiA	PF01656.23	gi|288560894|ref|YP_003424380.1|	-	2.3e-19	69.7	0.1	5.2e-19	68.6	0.1	1.6	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_26	PF13500.6	gi|288560894|ref|YP_003424380.1|	-	2.3e-19	70.0	0.9	1e-16	61.4	0.3	2.9	2	1	0	2	2	2	1	AAA	domain
SNO	PF01174.19	gi|288560894|ref|YP_003424380.1|	-	3.8e-06	26.9	0.1	7.8e-06	25.9	0.1	1.5	1	0	0	1	1	1	1	SNO	glutamine	amidotransferase	family
GATase	PF00117.28	gi|288560894|ref|YP_003424380.1|	-	2.9e-05	23.9	0.0	9.3e-05	22.3	0.0	2.0	2	0	0	2	2	2	1	Glutamine	amidotransferase	class-I
DJ-1_PfpI	PF01965.24	gi|288560894|ref|YP_003424380.1|	-	0.016	15.1	0.0	0.046	13.5	0.0	1.7	2	0	0	2	2	2	0	DJ-1/PfpI	family
Peptidase_C26	PF07722.13	gi|288560894|ref|YP_003424380.1|	-	0.023	14.4	0.1	0.061	13.1	0.1	1.6	1	1	0	1	1	1	0	Peptidase	C26
MobB	PF03205.14	gi|288560894|ref|YP_003424380.1|	-	0.03	14.2	0.1	0.31	11.0	0.0	2.4	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Thiolase_N	PF00108.23	gi|288560895|ref|YP_003424381.1|	-	9.2e-31	107.1	1.4	1.8e-30	106.2	1.4	1.5	1	0	0	1	1	1	1	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.18	gi|288560895|ref|YP_003424381.1|	-	9.3e-13	47.9	0.6	3.5e-12	46.1	0.6	2.0	1	1	0	1	1	1	1	Thiolase,	C-terminal	domain
ketoacyl-synt	PF00109.26	gi|288560895|ref|YP_003424381.1|	-	1e-05	25.3	2.3	1e-05	25.3	2.3	2.1	2	0	0	2	2	2	1	Beta-ketoacyl	synthase,	N-terminal	domain
ACP_syn_III	PF08545.10	gi|288560895|ref|YP_003424381.1|	-	0.00082	19.2	0.6	0.31	10.9	0.4	2.6	2	0	0	2	2	2	2	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Ketoacyl-synt_C	PF02801.22	gi|288560895|ref|YP_003424381.1|	-	0.025	14.6	0.5	4.3	7.4	0.1	2.7	2	0	0	2	2	2	0	Beta-ketoacyl	synthase,	C-terminal	domain
ACP_syn_III_C	PF08541.10	gi|288560896|ref|YP_003424382.1|	-	2.4e-13	50.1	0.0	9.2e-13	48.2	0.0	2.0	2	1	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III	C	terminal
HMG_CoA_synt_C	PF08540.10	gi|288560896|ref|YP_003424382.1|	-	5.4e-05	23.0	0.1	0.018	14.7	0.0	2.2	1	1	1	2	2	2	2	Hydroxymethylglutaryl-coenzyme	A	synthase	C	terminal
Thiolase_N	PF00108.23	gi|288560896|ref|YP_003424382.1|	-	7.6e-05	22.2	0.1	0.00011	21.7	0.1	1.1	1	0	0	1	1	1	1	Thiolase,	N-terminal	domain
HMG_CoA_synt_N	PF01154.17	gi|288560896|ref|YP_003424382.1|	-	0.0011	18.9	0.3	0.0016	18.4	0.3	1.2	1	0	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	synthase	N	terminal
ACP_syn_III	PF08545.10	gi|288560896|ref|YP_003424382.1|	-	0.0016	18.3	1.9	0.0034	17.2	1.0	2.0	2	0	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Phosphatase	PF15698.5	gi|288560896|ref|YP_003424382.1|	-	0.017	14.3	0.1	0.026	13.7	0.1	1.2	1	0	0	1	1	1	0	Phosphatase
SpoIIIAC	PF06686.11	gi|288560897|ref|YP_003424383.1|	-	0.013	15.6	1.8	0.013	15.6	1.8	1.8	2	1	0	2	2	2	0	Stage	III	sporulation	protein	AC/AD	protein	family
O-ag_pol_Wzy	PF14296.6	gi|288560897|ref|YP_003424383.1|	-	0.017	13.8	4.0	0.017	13.8	4.0	1.1	1	0	0	1	1	1	0	O-antigen	polysaccharide	polymerase	Wzy
KASH	PF10541.9	gi|288560897|ref|YP_003424383.1|	-	0.042	14.1	0.2	0.085	13.1	0.2	1.5	1	0	0	1	1	1	0	Nuclear	envelope	localisation	domain
SLATT_5	PF18160.1	gi|288560897|ref|YP_003424383.1|	-	0.16	11.3	0.2	0.24	10.7	0.2	1.2	1	0	0	1	1	1	0	SMODS	and	SLOG-associating	2TM	effector	domain	family	5
Methyltransf_11	PF08241.12	gi|288560899|ref|YP_003424385.1|	-	9.6e-20	71.0	0.0	1.5e-19	70.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|288560899|ref|YP_003424385.1|	-	1.6e-18	67.2	0.0	2.9e-18	66.4	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|288560899|ref|YP_003424385.1|	-	2e-17	63.4	0.2	2.7e-17	62.9	0.2	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|288560899|ref|YP_003424385.1|	-	2.7e-11	43.6	0.0	4.7e-11	42.8	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|288560899|ref|YP_003424385.1|	-	2.2e-10	40.3	0.0	3.8e-10	39.5	0.0	1.4	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_12	PF08242.12	gi|288560899|ref|YP_003424385.1|	-	2.6e-10	40.9	0.0	5.2e-10	40.0	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_9	PF08003.11	gi|288560899|ref|YP_003424385.1|	-	1.2e-09	37.6	0.0	1.7e-09	37.0	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1698)
PrmA	PF06325.13	gi|288560899|ref|YP_003424385.1|	-	3.6e-05	23.3	0.0	4.8e-05	22.9	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_2	PF00891.18	gi|288560899|ref|YP_003424385.1|	-	0.00015	21.1	0.0	0.00021	20.7	0.0	1.2	1	0	0	1	1	1	1	O-methyltransferase	domain
CMAS	PF02353.20	gi|288560899|ref|YP_003424385.1|	-	0.00022	20.6	0.0	0.00029	20.2	0.0	1.1	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
MTS	PF05175.14	gi|288560899|ref|YP_003424385.1|	-	0.00046	19.8	0.0	0.0011	18.6	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_8	PF05148.15	gi|288560899|ref|YP_003424385.1|	-	0.0012	18.7	0.1	0.0067	16.3	0.1	1.9	1	1	0	1	1	1	1	Hypothetical	methyltransferase
DUF3052	PF11253.8	gi|288560899|ref|YP_003424385.1|	-	0.0031	17.4	1.3	0.29	11.0	0.0	3.1	2	2	1	3	3	3	1	Protein	of	unknown	function	(DUF3052)
Methyltransf_32	PF13679.6	gi|288560899|ref|YP_003424385.1|	-	0.0058	16.6	0.0	0.0079	16.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.19	gi|288560899|ref|YP_003424385.1|	-	0.0061	16.3	0.0	0.0095	15.7	0.0	1.3	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
RrnaAD	PF00398.20	gi|288560899|ref|YP_003424385.1|	-	0.0096	15.0	0.0	0.013	14.6	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
N6_N4_Mtase	PF01555.18	gi|288560899|ref|YP_003424385.1|	-	0.023	14.4	0.0	0.36	10.5	0.0	2.2	2	0	0	2	2	2	0	DNA	methylase
TPMT	PF05724.11	gi|288560899|ref|YP_003424385.1|	-	0.047	13.3	0.0	0.075	12.7	0.0	1.3	1	0	0	1	1	1	0	Thiopurine	S-methyltransferase	(TPMT)
Methyltransf_15	PF09445.10	gi|288560899|ref|YP_003424385.1|	-	0.051	13.1	0.0	0.067	12.8	0.0	1.2	1	0	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
MetW	PF07021.12	gi|288560899|ref|YP_003424385.1|	-	0.056	13.0	0.1	0.084	12.4	0.1	1.3	1	0	0	1	1	1	0	Methionine	biosynthesis	protein	MetW
Methyltransf_5	PF01795.19	gi|288560899|ref|YP_003424385.1|	-	0.099	12.1	0.0	0.14	11.6	0.0	1.3	1	0	0	1	1	1	0	MraW	methylase	family
Methyltransf_18	PF12847.7	gi|288560899|ref|YP_003424385.1|	-	0.099	12.6	0.0	0.31	11.0	0.0	1.7	2	0	0	2	2	2	0	Methyltransferase	domain
Cpn60_TCP1	PF00118.24	gi|288560901|ref|YP_003424387.1|	-	2.1e-176	587.4	24.9	2.5e-176	587.1	24.9	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
DUF3924	PF13062.6	gi|288560901|ref|YP_003424387.1|	-	0.023	14.6	0.0	0.082	12.9	0.0	1.9	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3924)
Ribosomal_S13	PF00416.22	gi|288560901|ref|YP_003424387.1|	-	0.48	10.8	4.5	2.1	8.8	0.8	2.8	2	0	0	2	2	2	0	Ribosomal	protein	S13/S18
Peptidase_M78	PF06114.13	gi|288560902|ref|YP_003424388.1|	-	3.1e-08	33.6	0.0	5.8e-08	32.7	0.0	1.4	1	0	0	1	1	1	1	IrrE	N-terminal-like	domain
Cas_Cas1	PF01867.16	gi|288560903|ref|YP_003424389.1|	-	4.1e-08	32.7	0.5	5.9e-08	32.2	0.2	1.4	1	1	0	1	1	1	1	CRISPR	associated	protein	Cas1
Mltc_N	PF11873.8	gi|288560903|ref|YP_003424389.1|	-	0.023	14.4	0.2	0.029	14.1	0.2	1.2	1	0	0	1	1	1	0	Membrane-bound	lytic	murein	transglycosylase	C,	N-terminal	domain
Cas_Cas1	PF01867.16	gi|288560904|ref|YP_003424390.1|	-	3.4e-48	164.2	1.8	3.9e-48	164.0	1.8	1.0	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas1
CRISPR_Cas2	PF09827.9	gi|288560905|ref|YP_003424391.1|	-	2.8e-13	49.8	1.3	3.4e-13	49.6	1.3	1.1	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas2
Big_3_5	PF16640.5	gi|288560906|ref|YP_003424392.1|	-	5.2e-79	260.5	139.0	1.6e-08	34.6	6.6	20.8	20	1	0	20	20	20	15	Bacterial	Ig-like	domain	(group	3)
Chlam_PMP	PF02415.17	gi|288560906|ref|YP_003424392.1|	-	2.7e-24	84.0	190.4	0.015	15.7	0.6	33.4	35	1	0	35	35	33	15	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
Big_1	PF02369.16	gi|288560906|ref|YP_003424392.1|	-	6.2e-19	67.8	34.4	1.4e-08	34.6	0.5	7.6	7	0	0	7	7	7	3	Bacterial	Ig-like	domain	(group	1)
CarboxypepD_reg	PF13620.6	gi|288560906|ref|YP_003424392.1|	-	4.2e-14	52.6	33.1	5.8e-05	23.3	0.4	11.6	12	0	0	12	12	12	4	Carboxypeptidase	regulatory-like	domain
Y_Y_Y	PF07495.13	gi|288560906|ref|YP_003424392.1|	-	1.2e-07	31.5	18.7	0.21	11.6	0.0	8.1	8	0	0	8	8	8	3	Y_Y_Y	domain
MG4	PF17789.1	gi|288560906|ref|YP_003424392.1|	-	1.2e-06	28.6	5.9	0.045	13.9	0.0	5.8	5	0	0	5	5	5	2	Macroglobulin	domain	MG4
DUF3324	PF11797.8	gi|288560906|ref|YP_003424392.1|	-	3.4e-05	23.8	7.4	38	4.2	0.0	8.4	9	0	0	9	9	9	0	Protein	of	unknown	function	C-terminal	(DUF3324)
Invasin_D3	PF09134.10	gi|288560906|ref|YP_003424392.1|	-	8e-05	22.9	2.9	8e-05	22.9	2.9	11.4	7	2	3	11	11	10	3	Invasin,	domain	3
ZirS_C	PF16583.5	gi|288560906|ref|YP_003424392.1|	-	0.011	15.4	9.5	0.28	10.7	0.4	4.1	2	1	1	3	3	3	0	Zinc-regulated	secreted	antivirulence	protein	C-terminal	domain
DUF3244	PF11589.8	gi|288560906|ref|YP_003424392.1|	-	0.011	15.7	26.2	0.77	9.9	1.0	9.2	9	1	1	10	10	10	0	Domain	of	unknown	function	(DUF3244)
DUF5074	PF16819.5	gi|288560906|ref|YP_003424392.1|	-	0.03	14.4	0.8	33	4.5	0.0	4.7	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF5074)
DUF4998	PF16389.5	gi|288560906|ref|YP_003424392.1|	-	0.38	10.3	13.3	9.9	5.7	0.1	6.0	6	0	0	6	6	6	0	Domain	of	unknown	function
DUF824	PF05688.11	gi|288560906|ref|YP_003424392.1|	-	1.4	8.8	5.5	5.7	6.9	0.1	4.2	4	0	0	4	4	4	0	Salmonella	repeat	of	unknown	function	(DUF824)
TcfC	PF16967.5	gi|288560906|ref|YP_003424392.1|	-	8.2	6.0	13.3	1.7	8.2	0.1	5.7	7	0	0	7	7	6	0	E-set	like	domain
Big_3_5	PF16640.5	gi|288560907|ref|YP_003424393.1|	-	1.9e-15	56.8	11.9	2.3e-11	43.7	6.2	2.2	2	0	0	2	2	2	2	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|288560907|ref|YP_003424393.1|	-	5.7e-13	48.7	3.0	2e-08	34.1	0.7	2.9	2	1	1	3	3	3	2	Bacterial	Ig-like	domain	(group	1)
Invasin_D3	PF09134.10	gi|288560907|ref|YP_003424393.1|	-	7.4e-11	42.2	5.6	2.3e-05	24.6	5.4	2.1	1	1	1	2	2	2	2	Invasin,	domain	3
CarboxypepD_reg	PF13620.6	gi|288560907|ref|YP_003424393.1|	-	2.9e-08	33.9	3.9	0.0018	18.5	0.5	2.3	2	1	0	2	2	2	2	Carboxypeptidase	regulatory-like	domain
YtkA	PF13115.6	gi|288560907|ref|YP_003424393.1|	-	0.0011	19.6	1.6	0.016	15.8	0.4	2.5	2	1	0	2	2	2	1	YtkA-like
Lipoprotein_17	PF04200.12	gi|288560907|ref|YP_003424393.1|	-	0.046	14.1	11.5	0.15	12.5	8.3	2.3	2	0	0	2	2	2	0	Lipoprotein	associated	domain
hGDE_N	PF14699.6	gi|288560907|ref|YP_003424393.1|	-	0.27	11.4	2.5	5.6	7.2	0.2	2.4	1	1	0	2	2	2	0	N-terminal	domain	from	the	human	glycogen	debranching	enzyme
zinc_ribbon_2	PF13240.6	gi|288560909|ref|YP_003424395.1|	-	1.2e-08	34.3	3.0	2e-08	33.7	3.0	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|288560909|ref|YP_003424395.1|	-	0.0012	18.2	0.4	0.0017	17.7	0.4	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-tcix	PF14952.6	gi|288560909|ref|YP_003424395.1|	-	0.003	17.1	0.0	0.0059	16.2	0.0	1.4	1	0	0	1	1	1	1	Putative	treble-clef,	zinc-finger,	Zn-binding
DZR	PF12773.7	gi|288560909|ref|YP_003424395.1|	-	0.0041	17.1	0.4	0.006	16.6	0.4	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-NADH-PPase	PF09297.11	gi|288560909|ref|YP_003424395.1|	-	0.086	12.5	1.1	0.18	11.5	0.1	2.0	1	1	1	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
DUF1211	PF06736.11	gi|288560910|ref|YP_003424396.1|	-	3.8e-16	59.3	4.8	3.8e-16	59.3	4.8	1.9	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1211)
DUF4337	PF14235.6	gi|288560910|ref|YP_003424396.1|	-	0.00022	21.4	1.1	0.00028	21.0	0.2	1.6	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4337)
DUF3450	PF11932.8	gi|288560910|ref|YP_003424396.1|	-	0.079	12.3	6.4	0.11	11.8	6.4	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3450)
Fmp27_WPPW	PF10359.9	gi|288560910|ref|YP_003424396.1|	-	0.093	11.6	5.9	0.12	11.1	5.9	1.1	1	0	0	1	1	1	0	RNA	pol	II	promoter	Fmp27	protein	domain
FliS	PF02561.14	gi|288560910|ref|YP_003424396.1|	-	0.15	12.3	4.1	3.5	7.9	1.8	2.5	2	1	1	3	3	3	0	Flagellar	protein	FliS
Exonuc_VII_L	PF02601.15	gi|288560910|ref|YP_003424396.1|	-	0.22	11.1	2.4	0.27	10.7	2.4	1.1	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
DUF16	PF01519.16	gi|288560910|ref|YP_003424396.1|	-	0.64	10.5	7.4	1.1	9.8	7.4	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF16
Peptidase_M41	PF01434.18	gi|288560910|ref|YP_003424396.1|	-	0.87	9.4	4.8	1.3	8.9	4.8	1.3	1	0	0	1	1	1	0	Peptidase	family	M41
Fzo_mitofusin	PF04799.13	gi|288560910|ref|YP_003424396.1|	-	1.1	8.8	4.0	1.7	8.2	4.0	1.3	1	0	0	1	1	1	0	fzo-like	conserved	region
DUF4168	PF13767.6	gi|288560910|ref|YP_003424396.1|	-	4.1	8.6	8.6	6.1	8.1	8.6	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4168)
M16C_assoc	PF08367.11	gi|288560910|ref|YP_003424396.1|	-	5.7	6.0	9.4	8.2	5.5	9.4	1.2	1	0	0	1	1	1	0	Peptidase	M16C	associated
Spc7	PF08317.11	gi|288560911|ref|YP_003424397.1|	-	0.00089	18.2	13.6	0.00089	18.2	13.6	6.1	1	1	4	6	6	6	1	Spc7	kinetochore	protein
DUF3552	PF12072.8	gi|288560911|ref|YP_003424397.1|	-	0.0011	18.5	7.4	0.0011	18.5	7.4	7.1	2	2	4	7	7	7	2	Domain	of	unknown	function	(DUF3552)
TrmB	PF01978.19	gi|288560911|ref|YP_003424397.1|	-	0.035	14.0	0.1	0.58	10.1	0.0	2.8	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
Pox_A_type_inc	PF04508.12	gi|288560911|ref|YP_003424397.1|	-	0.24	11.3	4.7	0.73	9.8	0.1	4.7	5	0	0	5	5	5	0	Viral	A-type	inclusion	protein	repeat
ATP-synt_G	PF04718.15	gi|288560911|ref|YP_003424397.1|	-	0.57	11.0	2.4	1.6	9.6	0.4	2.8	2	1	2	4	4	4	0	Mitochondrial	ATP	synthase	g	subunit
MatE	PF01554.18	gi|288560914|ref|YP_003424400.1|	-	1e-29	103.2	37.6	9.1e-21	74.2	11.0	2.9	4	0	0	4	4	4	2	MatE
Polysacc_synt_C	PF14667.6	gi|288560914|ref|YP_003424400.1|	-	1.6e-08	34.7	20.5	5.4e-08	33.0	8.0	4.7	3	3	1	4	4	4	2	Polysaccharide	biosynthesis	C-terminal	domain
Comm	PF15957.5	gi|288560914|ref|YP_003424400.1|	-	2.6	8.4	0.0	2.6	8.4	0.0	3.4	3	0	0	3	3	3	0	Commissureless
DUF957	PF06117.11	gi|288560915|ref|YP_003424401.1|	-	2	8.0	6.2	1.1	8.9	0.3	2.7	2	0	0	2	2	2	0	Enterobacterial	protein	of	unknown	function	(DUF957)
Adeno_E1B_55K	PF01696.17	gi|288560915|ref|YP_003424401.1|	-	2.5	6.7	9.0	0.063	12.0	1.2	2.0	2	1	1	3	3	3	0	Adenovirus	EB1	55K	protein	/	large	t-antigen
DUF447	PF04289.12	gi|288560916|ref|YP_003424402.1|	-	1.9e-39	135.2	0.2	2.2e-39	135.1	0.2	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF447)
Chlam_PMP	PF02415.17	gi|288560917|ref|YP_003424403.1|	-	7.5e-12	45.0	47.3	0.0084	16.5	0.4	10.0	10	0	0	10	10	10	7	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
DUF1137	PF06587.11	gi|288560917|ref|YP_003424403.1|	-	0.85	9.7	3.0	32	4.6	0.1	3.7	2	2	2	4	4	4	0	Protein	of	unknown	function	(DUF1137)
DDE_Tnp_1	PF01609.21	gi|288560918|ref|YP_003424404.1|	-	8.4e-12	45.2	0.5	1.5e-11	44.4	0.5	1.4	1	0	0	1	1	1	1	Transposase	DDE	domain
Skp1	PF01466.19	gi|288560918|ref|YP_003424404.1|	-	0.062	13.4	0.1	0.15	12.2	0.1	1.7	1	0	0	1	1	1	0	Skp1	family,	dimerisation	domain
DUF3173	PF11372.8	gi|288560918|ref|YP_003424404.1|	-	0.12	12.3	0.7	0.37	10.7	0.1	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3173)
COOH-NH2_lig	PF14395.6	gi|288560918|ref|YP_003424404.1|	-	0.12	11.6	0.0	3.5	6.8	0.0	2.3	1	1	1	2	2	2	0	Phage	phiEco32-like	COOH.NH2	ligase-type	2
Staphylokinase	PF02821.16	gi|288560918|ref|YP_003424404.1|	-	0.63	10.5	6.8	1.2	9.6	0.1	3.3	2	1	1	3	3	3	0	Staphylokinase/Streptokinase	family
Ribosomal_L21p	PF00829.21	gi|288560920|ref|YP_003424406.1|	-	0.08	13.2	0.1	0.11	12.8	0.1	1.2	1	0	0	1	1	1	0	Ribosomal	prokaryotic	L21	protein
Mst1_SARAH	PF11629.8	gi|288560921|ref|YP_003424407.1|	-	0.071	13.2	0.0	0.099	12.7	0.0	1.2	1	0	0	1	1	1	0	C	terminal	SARAH	domain	of	Mst1
Pesticin	PF16754.5	gi|288560922|ref|YP_003424408.1|	-	0.16	11.9	0.5	7.1	6.6	0.0	2.2	2	0	0	2	2	2	0	Bacterial	toxin	homologue	of	phage	lysozyme,	C-term
HIRAN	PF08797.11	gi|288560923|ref|YP_003424409.1|	-	2.2e-07	30.7	0.0	3e-07	30.3	0.0	1.2	1	0	0	1	1	1	1	HIRAN	domain
OapA	PF04225.12	gi|288560923|ref|YP_003424409.1|	-	0.00011	22.2	0.0	0.00016	21.7	0.0	1.2	1	0	0	1	1	1	1	Opacity-associated	protein	A	LysM-like	domain
DnaJ	PF00226.31	gi|288560924|ref|YP_003424410.1|	-	3.3e-06	27.1	1.2	1.3e-05	25.2	1.0	2.2	1	1	0	1	1	1	1	DnaJ	domain
tRNA-synt_1	PF00133.22	gi|288560924|ref|YP_003424410.1|	-	0.013	13.8	1.1	0.023	12.9	1.1	1.3	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Tim44	PF04280.15	gi|288560924|ref|YP_003424410.1|	-	0.013	15.6	0.4	0.029	14.5	0.1	1.8	2	0	0	2	2	2	0	Tim44-like	domain
DASH_Dad3	PF08656.10	gi|288560924|ref|YP_003424410.1|	-	8.4	6.6	11.0	7.6	6.7	3.6	3.3	2	2	0	2	2	2	0	DASH	complex	subunit	Dad3
Semialdhyde_dhC	PF02774.18	gi|288560925|ref|YP_003424411.1|	-	1.9e-44	151.9	0.0	4.3e-44	150.8	0.0	1.6	2	0	0	2	2	2	1	Semialdehyde	dehydrogenase,	dimerisation	domain
Semialdhyde_dh	PF01118.24	gi|288560925|ref|YP_003424411.1|	-	5.4e-34	117.2	0.0	9.8e-34	116.4	0.0	1.4	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
DapB_N	PF01113.20	gi|288560925|ref|YP_003424411.1|	-	0.00033	20.8	0.0	0.00058	20.0	0.0	1.5	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
Gp_dh_C	PF02800.20	gi|288560925|ref|YP_003424411.1|	-	0.00046	19.8	0.2	0.02	14.5	0.0	2.9	3	1	0	3	3	3	1	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
DXP_reductoisom	PF02670.16	gi|288560925|ref|YP_003424411.1|	-	0.00084	20.1	0.0	0.0018	19.0	0.0	1.7	1	0	0	1	1	1	1	1-deoxy-D-xylulose	5-phosphate	reductoisomerase
Sacchrp_dh_NADP	PF03435.18	gi|288560925|ref|YP_003424411.1|	-	0.0052	17.1	0.0	0.0096	16.2	0.0	1.5	1	0	0	1	1	1	1	Saccharopine	dehydrogenase	NADP	binding	domain
NAD_binding_10	PF13460.6	gi|288560925|ref|YP_003424411.1|	-	0.071	13.0	0.0	0.12	12.2	0.0	1.5	1	0	0	1	1	1	0	NAD(P)H-binding
DapB_C	PF05173.14	gi|288560926|ref|YP_003424412.1|	-	1.6e-39	134.7	0.1	2.3e-39	134.1	0.1	1.3	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	C-terminus
DapB_N	PF01113.20	gi|288560926|ref|YP_003424412.1|	-	7e-33	113.4	2.6	7e-33	113.4	2.6	2.4	2	0	0	2	2	2	1	Dihydrodipicolinate	reductase,	N-terminus
NmrA	PF05368.13	gi|288560926|ref|YP_003424412.1|	-	0.0037	16.8	1.7	0.0055	16.3	1.7	1.2	1	0	0	1	1	1	1	NmrA-like	family
CoA_binding	PF02629.19	gi|288560926|ref|YP_003424412.1|	-	0.012	16.3	5.5	0.016	15.9	2.0	2.5	2	0	0	2	2	2	0	CoA	binding	domain
Semialdhyde_dh	PF01118.24	gi|288560926|ref|YP_003424412.1|	-	0.037	14.5	1.9	0.046	14.2	0.2	2.1	2	1	0	2	2	2	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
Gp_dh_N	PF00044.24	gi|288560926|ref|YP_003424412.1|	-	0.041	14.2	1.0	0.55	10.6	1.0	2.7	1	1	0	1	1	1	0	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
NAD_binding_10	PF13460.6	gi|288560926|ref|YP_003424412.1|	-	0.11	12.4	1.2	0.25	11.2	1.2	1.8	1	1	0	1	1	1	0	NAD(P)H-binding
DHDPS	PF00701.22	gi|288560927|ref|YP_003424413.1|	-	1.3e-91	306.3	0.1	1.5e-91	306.1	0.1	1.0	1	0	0	1	1	1	1	Dihydrodipicolinate	synthetase	family
AA_kinase	PF00696.28	gi|288560928|ref|YP_003424414.1|	-	2.7e-52	177.8	0.6	4e-52	177.2	0.6	1.3	1	0	0	1	1	1	1	Amino	acid	kinase	family
ACT_7	PF13840.6	gi|288560928|ref|YP_003424414.1|	-	4.3e-18	64.9	3.1	1.3e-08	34.5	0.1	2.7	3	0	0	3	3	3	2	ACT	domain
ACT	PF01842.25	gi|288560928|ref|YP_003424414.1|	-	2e-09	37.1	0.4	0.0011	18.7	0.1	2.9	2	0	0	2	2	2	2	ACT	domain
ACT_4	PF13291.6	gi|288560928|ref|YP_003424414.1|	-	0.00016	22.2	0.6	0.27	11.8	0.1	2.5	2	0	0	2	2	2	2	ACT	domain
Ribosomal_S17e	PF00833.18	gi|288560929|ref|YP_003424415.1|	-	1.9e-18	66.5	1.2	2e-18	66.5	1.2	1.0	1	0	0	1	1	1	1	Ribosomal	S17
DUF2172	PF09940.9	gi|288560929|ref|YP_003424415.1|	-	0.0094	16.3	0.0	0.01	16.2	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF2172)
CM_2	PF01817.21	gi|288560930|ref|YP_003424416.1|	-	4.3e-15	55.8	2.6	6.9e-15	55.2	2.6	1.3	1	0	0	1	1	1	1	Chorismate	mutase	type	II
Hom_end	PF05204.14	gi|288560930|ref|YP_003424416.1|	-	0.056	13.6	0.2	0.073	13.2	0.2	1.1	1	0	0	1	1	1	0	Homing	endonuclease
Radical_SAM	PF04055.21	gi|288560931|ref|YP_003424417.1|	-	4.5e-12	46.7	1.3	6.8e-12	46.1	0.9	1.5	1	1	0	1	1	1	1	Radical	SAM	superfamily
DUF1848	PF08902.11	gi|288560931|ref|YP_003424417.1|	-	0.027	14.2	6.6	0.11	12.2	0.2	2.5	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF1848)
Fer4_14	PF13394.6	gi|288560931|ref|YP_003424417.1|	-	0.12	12.6	1.9	0.7	10.0	1.9	2.4	1	1	0	1	1	1	0	4Fe-4S	single	cluster	domain
GHMP_kinases_N	PF00288.26	gi|288560932|ref|YP_003424418.1|	-	7.1e-12	45.4	9.7	7.4e-12	45.3	0.8	3.2	3	0	0	3	3	3	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.13	gi|288560932|ref|YP_003424418.1|	-	4.2e-05	23.8	0.0	0.0001	22.6	0.0	1.7	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
SBP_bac_1	PF01547.25	gi|288560932|ref|YP_003424418.1|	-	0.0091	16.0	0.1	0.012	15.6	0.1	1.2	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
DUF1269	PF06897.12	gi|288560932|ref|YP_003424418.1|	-	0.02	15.1	0.0	0.055	13.8	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1269)
Peptidase_S49	PF01343.18	gi|288560933|ref|YP_003424419.1|	-	2.2e-23	82.9	2.1	3.6e-23	82.2	2.1	1.3	1	0	0	1	1	1	1	Peptidase	family	S49
CLP_protease	PF00574.23	gi|288560933|ref|YP_003424419.1|	-	2.5e-05	24.3	1.0	0.019	14.9	0.1	2.3	2	0	0	2	2	2	2	Clp	protease
ECH_1	PF00378.20	gi|288560933|ref|YP_003424419.1|	-	3.6e-05	23.2	0.0	0.13	11.6	0.0	3.1	2	1	0	3	3	3	2	Enoyl-CoA	hydratase/isomerase
BfiI_DBD	PF18243.1	gi|288560933|ref|YP_003424419.1|	-	0.028	14.0	0.3	0.059	13.0	0.3	1.6	1	0	0	1	1	1	0	Metal-independent	restriction	enzyme	BfiI	DNA	binding	domain
Nefa_Nip30_N	PF10187.9	gi|288560933|ref|YP_003424419.1|	-	0.4	11.1	2.7	0.48	10.8	1.1	1.9	2	0	0	2	2	2	0	N-terminal	domain	of	NEFA-interacting	nuclear	protein	NIP30
ABC2_membrane_3	PF12698.7	gi|288560933|ref|YP_003424419.1|	-	1.6	7.7	14.0	19	4.2	14.0	2.0	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
Thioredoxin_3	PF13192.6	gi|288560934|ref|YP_003424420.1|	-	1.3e-15	57.2	0.1	1.4e-15	57.1	0.1	1.0	1	0	0	1	1	1	1	Thioredoxin	domain
Glutaredoxin	PF00462.24	gi|288560934|ref|YP_003424420.1|	-	4e-10	39.8	0.0	5e-10	39.4	0.0	1.1	1	0	0	1	1	1	1	Glutaredoxin
Thioredoxin_4	PF13462.6	gi|288560934|ref|YP_003424420.1|	-	8e-09	35.9	0.4	3.6e-05	24.0	0.0	2.0	1	1	1	2	2	2	2	Thioredoxin
Thioredoxin	PF00085.20	gi|288560934|ref|YP_003424420.1|	-	4.7e-06	26.5	0.0	5.5e-06	26.3	0.0	1.1	1	0	0	1	1	1	1	Thioredoxin
DSBA	PF01323.20	gi|288560934|ref|YP_003424420.1|	-	2e-05	24.5	0.1	0.0017	18.2	0.0	2.0	1	1	1	2	2	2	2	DSBA-like	thioredoxin	domain
DUF1223	PF06764.11	gi|288560934|ref|YP_003424420.1|	-	5.2e-05	23.4	0.1	0.0094	16.0	0.0	2.0	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF1223)
Thioredoxin_2	PF13098.6	gi|288560934|ref|YP_003424420.1|	-	0.0098	16.3	0.8	0.23	11.9	0.8	2.1	1	1	0	1	1	1	1	Thioredoxin-like	domain
DUF836	PF05768.14	gi|288560934|ref|YP_003424420.1|	-	0.038	14.4	0.0	0.04	14.3	0.0	1.1	1	0	0	1	1	1	0	Glutaredoxin-like	domain	(DUF836)
Glycos_transf_1	PF00534.20	gi|288560935|ref|YP_003424421.1|	-	1.3e-42	145.2	1.0	2.3e-42	144.4	0.4	1.7	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|288560935|ref|YP_003424421.1|	-	5.6e-33	114.2	0.1	2.8e-32	111.9	0.0	2.1	3	0	0	3	3	3	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|288560935|ref|YP_003424421.1|	-	2.6e-29	102.4	0.0	3.8e-29	101.9	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_4_2	PF13477.6	gi|288560935|ref|YP_003424421.1|	-	3.8e-18	65.9	0.3	6.1e-18	65.2	0.3	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	4-like
Glyco_trans_4_4	PF13579.6	gi|288560935|ref|YP_003424421.1|	-	1.9e-15	57.7	0.0	2.7e-15	57.2	0.0	1.1	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_1_2	PF13524.6	gi|288560935|ref|YP_003424421.1|	-	1.6e-08	34.8	0.0	4.2e-08	33.5	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_5	PF08323.11	gi|288560935|ref|YP_003424421.1|	-	5.4e-05	23.0	0.2	0.0027	17.4	0.0	2.4	1	1	0	2	2	2	1	Starch	synthase	catalytic	domain
MoaC	PF01967.21	gi|288560936|ref|YP_003424422.1|	-	3e-51	173.1	3.2	3.7e-51	172.8	3.2	1.0	1	0	0	1	1	1	1	MoaC	family
Prenylcys_lyase	PF07156.14	gi|288560936|ref|YP_003424422.1|	-	0.08	12.0	1.0	3.5	6.6	0.1	2.0	1	1	1	2	2	2	0	Prenylcysteine	lyase
NIBRIN_BRCT_II	PF16508.5	gi|288560936|ref|YP_003424422.1|	-	0.11	12.8	0.1	0.18	12.1	0.1	1.3	1	0	0	1	1	1	0	Second	BRCT	domain	on	Nijmegen	syndrome	breakage	protein
DEAD	PF00270.29	gi|288560937|ref|YP_003424423.1|	-	2.1e-14	53.7	0.3	1.7e-13	50.7	0.0	2.7	3	1	0	3	3	3	1	DEAD/DEAH	box	helicase
HHH_2	PF12826.7	gi|288560937|ref|YP_003424423.1|	-	6.8e-09	35.7	0.0	4.1e-08	33.2	0.0	2.4	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
HHH_5	PF14520.6	gi|288560937|ref|YP_003424423.1|	-	9.5e-07	29.3	0.0	3.4e-06	27.5	0.0	2.0	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
ResIII	PF04851.15	gi|288560937|ref|YP_003424423.1|	-	1.4e-06	28.4	1.7	1.3e-05	25.3	0.0	3.1	3	1	0	3	3	3	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.31	gi|288560937|ref|YP_003424423.1|	-	2.5e-06	27.8	0.0	2.3e-05	24.7	0.0	2.6	1	1	0	1	1	1	1	Helicase	conserved	C-terminal	domain
HHH	PF00633.23	gi|288560937|ref|YP_003424423.1|	-	4.7e-06	26.2	0.0	3.1e-05	23.6	0.0	2.4	3	0	0	3	3	3	1	Helix-hairpin-helix	motif
HHH_3	PF12836.7	gi|288560937|ref|YP_003424423.1|	-	0.032	14.5	0.0	0.083	13.2	0.0	1.7	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
HHH_8	PF14716.6	gi|288560937|ref|YP_003424423.1|	-	0.035	14.5	0.0	0.16	12.3	0.0	2.1	2	0	0	2	2	2	0	Helix-hairpin-helix	domain
Skp1	PF01466.19	gi|288560937|ref|YP_003424423.1|	-	0.11	12.7	1.4	14	5.9	0.1	3.4	3	0	0	3	3	3	0	Skp1	family,	dimerisation	domain
DUF2098	PF09871.9	gi|288560938|ref|YP_003424424.1|	-	6.3e-24	84.1	0.8	7.2e-24	84.0	0.8	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2098)
PRC	PF05239.16	gi|288560939|ref|YP_003424425.1|	-	2.9e-08	33.7	1.4	4.5e-08	33.1	1.4	1.3	1	0	0	1	1	1	1	PRC-barrel	domain
PIP5K	PF01504.18	gi|288560939|ref|YP_003424425.1|	-	0.024	13.9	3.4	0.029	13.6	3.4	1.1	1	0	0	1	1	1	0	Phosphatidylinositol-4-phosphate	5-Kinase
DUF3435	PF11917.8	gi|288560939|ref|YP_003424425.1|	-	0.026	13.4	6.7	0.031	13.2	6.7	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3435)
Borrelia_P83	PF05262.11	gi|288560939|ref|YP_003424425.1|	-	0.065	11.7	18.5	0.079	11.4	18.5	1.1	1	0	0	1	1	1	0	Borrelia	P83/100	protein
AP3D1	PF06375.11	gi|288560939|ref|YP_003424425.1|	-	0.28	11.4	13.6	0.34	11.1	13.6	1.1	1	0	0	1	1	1	0	AP-3	complex	subunit	delta-1
FIVAR	PF07554.13	gi|288560939|ref|YP_003424425.1|	-	0.29	11.9	12.4	0.53	11.1	11.9	1.8	1	1	0	1	1	1	0	FIVAR	domain
NARP1	PF12569.8	gi|288560939|ref|YP_003424425.1|	-	0.41	9.5	16.9	0.5	9.2	16.9	1.1	1	0	0	1	1	1	0	NMDA	receptor-regulated	protein	1
DUF4746	PF15928.5	gi|288560939|ref|YP_003424425.1|	-	0.48	9.8	15.4	0.54	9.6	15.4	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4746)
Eapp_C	PF10238.9	gi|288560939|ref|YP_003424425.1|	-	0.77	9.8	8.2	1.1	9.3	8.2	1.3	1	0	0	1	1	1	0	E2F-associated	phosphoprotein
DDHD	PF02862.17	gi|288560939|ref|YP_003424425.1|	-	0.93	9.6	2.9	0.96	9.6	2.9	1.1	1	0	0	1	1	1	0	DDHD	domain
DUF31	PF01732.16	gi|288560939|ref|YP_003424425.1|	-	1.2	8.6	9.0	1.4	8.4	9.0	1.1	1	0	0	1	1	1	0	Putative	peptidase	(DUF31)
CENP-N	PF05238.13	gi|288560939|ref|YP_003424425.1|	-	1.2	8.3	7.5	1.3	8.3	7.5	1.1	1	0	0	1	1	1	0	Kinetochore	protein	CHL4	like
Rtf2	PF04641.12	gi|288560939|ref|YP_003424425.1|	-	3.2	7.0	15.2	4	6.7	15.2	1.1	1	0	0	1	1	1	0	Rtf2	RING-finger
Thg1C	PF14413.6	gi|288560939|ref|YP_003424425.1|	-	6.1	7.0	10.6	15	5.8	10.6	1.7	1	1	0	1	1	1	0	Thg1	C	terminal	domain
TMPIT	PF07851.13	gi|288560939|ref|YP_003424425.1|	-	8.4	5.5	8.3	10	5.3	8.3	1.1	1	0	0	1	1	1	0	TMPIT-like	protein
XRN_M	PF17846.1	gi|288560939|ref|YP_003424425.1|	-	9.3	5.1	11.0	10	4.9	11.0	1.1	1	0	0	1	1	1	0	Xrn1	helical	domain
Connexin	PF00029.19	gi|288560939|ref|YP_003424425.1|	-	9.5	5.9	6.9	12	5.6	6.9	1.2	1	0	0	1	1	1	0	Connexin
Radical_SAM_C	PF16199.5	gi|288560940|ref|YP_003424426.1|	-	9.9e-28	96.0	1.0	3.6e-27	94.2	0.3	2.2	2	0	0	2	2	2	1	Radical_SAM	C-terminal	domain
Radical_SAM	PF04055.21	gi|288560940|ref|YP_003424426.1|	-	8.5e-18	65.3	0.5	2.4e-17	63.8	0.5	1.8	1	0	0	1	1	1	1	Radical	SAM	superfamily
Acetyltransf_1	PF00583.25	gi|288560940|ref|YP_003424426.1|	-	8.5e-05	22.8	0.1	0.00032	20.9	0.0	1.9	1	1	1	2	2	2	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.7	gi|288560940|ref|YP_003424426.1|	-	0.00072	19.5	0.2	0.0024	17.8	0.1	1.9	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.7	gi|288560940|ref|YP_003424426.1|	-	0.13	12.7	0.4	0.28	11.6	0.4	1.6	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
DeoC	PF01791.9	gi|288560941|ref|YP_003424427.1|	-	1e-14	54.7	5.1	1.5e-14	54.2	5.1	1.1	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
CBFD_NFYB_HMF	PF00808.23	gi|288560942|ref|YP_003424428.1|	-	2.8e-21	75.6	0.3	3.1e-21	75.4	0.3	1.0	1	0	0	1	1	1	1	Histone-like	transcription	factor	(CBF/NF-Y)	and	archaeal	histone
Histone	PF00125.24	gi|288560942|ref|YP_003424428.1|	-	6.3e-11	42.8	0.0	6.8e-11	42.7	0.0	1.0	1	0	0	1	1	1	1	Core	histone	H2A/H2B/H3/H4
CENP-S	PF15630.6	gi|288560942|ref|YP_003424428.1|	-	3.3e-07	30.6	0.0	3.7e-07	30.4	0.0	1.1	1	0	0	1	1	1	1	CENP-S	protein
TAF	PF02969.17	gi|288560942|ref|YP_003424428.1|	-	4.7e-07	29.9	0.2	4.7e-07	29.9	0.2	1.0	1	0	0	1	1	1	1	TATA	box	binding	protein	associated	factor	(TAF)
CENP-T_C	PF15511.6	gi|288560942|ref|YP_003424428.1|	-	3.1e-05	24.1	0.0	3.1e-05	24.1	0.0	1.1	1	0	0	1	1	1	1	Centromere	kinetochore	component	CENP-T	histone	fold
TFIID-31kDa	PF02291.15	gi|288560942|ref|YP_003424428.1|	-	0.0013	18.8	0.0	0.0014	18.7	0.0	1.1	1	0	0	1	1	1	1	Transcription	initiation	factor	IID,	31kD	subunit
Bromo_TP	PF07524.13	gi|288560942|ref|YP_003424428.1|	-	0.0022	18.0	0.0	0.0026	17.7	0.0	1.2	1	0	0	1	1	1	1	Bromodomain	associated
TFIID_20kDa	PF03847.13	gi|288560942|ref|YP_003424428.1|	-	0.045	14.3	0.1	0.05	14.1	0.1	1.1	1	0	0	1	1	1	0	Transcription	initiation	factor	TFIID	subunit	A
TfuA	PF07812.12	gi|288560942|ref|YP_003424428.1|	-	0.084	12.6	0.0	0.084	12.6	0.0	1.0	1	0	0	1	1	1	0	TfuA-like	protein
TFIID-18kDa	PF02269.16	gi|288560942|ref|YP_003424428.1|	-	0.085	12.9	0.0	0.089	12.8	0.0	1.1	1	0	0	1	1	1	0	Transcription	initiation	factor	IID,	18kD	subunit
UPF0004	PF00919.20	gi|288560943|ref|YP_003424429.1|	-	1.2e-26	92.6	0.1	2.6e-26	91.5	0.1	1.6	1	0	0	1	1	1	1	Uncharacterized	protein	family	UPF0004
Radical_SAM	PF04055.21	gi|288560943|ref|YP_003424429.1|	-	2.4e-21	76.8	0.5	4.7e-21	75.9	0.3	1.6	2	0	0	2	2	2	1	Radical	SAM	superfamily
TRAM	PF01938.20	gi|288560943|ref|YP_003424429.1|	-	1.2e-07	31.6	0.2	2.7e-07	30.5	0.2	1.6	1	0	0	1	1	1	1	TRAM	domain
B12-binding	PF02310.19	gi|288560943|ref|YP_003424429.1|	-	0.075	13.1	0.0	0.24	11.5	0.0	1.8	1	0	0	1	1	1	0	B12	binding	domain
DUF1450	PF07293.11	gi|288560943|ref|YP_003424429.1|	-	0.86	9.5	6.1	2	8.3	1.7	2.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1450)
TF_Zn_Ribbon	PF08271.12	gi|288560944|ref|YP_003424430.1|	-	0.0011	18.5	1.5	0.01	15.3	1.5	2.2	1	1	0	1	1	1	1	TFIIB	zinc-binding
Lar_restr_allev	PF14354.6	gi|288560944|ref|YP_003424430.1|	-	0.04	14.3	0.0	0.072	13.5	0.0	1.5	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
zf-RRN7	PF11781.8	gi|288560944|ref|YP_003424430.1|	-	0.056	13.2	1.7	2.3	8.0	0.3	2.3	2	0	0	2	2	2	0	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
Zn_Tnp_IS1595	PF12760.7	gi|288560944|ref|YP_003424430.1|	-	0.077	13.0	0.0	0.16	12.0	0.0	1.6	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
Zn_ribbon_recom	PF13408.6	gi|288560944|ref|YP_003424430.1|	-	0.1	13.2	0.3	0.78	10.3	0.0	2.3	2	0	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
Aconitase_C	PF00694.19	gi|288560945|ref|YP_003424431.1|	-	7.2e-21	74.9	0.1	2.8e-19	69.8	0.2	2.1	1	1	1	2	2	2	2	Aconitase	C-terminal	domain
Aconitase_2_N	PF06434.13	gi|288560945|ref|YP_003424431.1|	-	0.0012	18.5	0.4	0.019	14.6	0.4	2.1	1	1	0	1	1	1	1	Aconitate	hydratase	2	N-terminus
GHMP_kinases_C	PF08544.13	gi|288560946|ref|YP_003424432.1|	-	0.0015	18.9	0.0	0.076	13.4	0.0	2.8	3	0	0	3	3	3	1	GHMP	kinases	C	terminal
GHMP_kinases_N	PF00288.26	gi|288560946|ref|YP_003424432.1|	-	0.0016	18.7	0.1	0.003	17.8	0.1	1.5	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
Radical_SAM	PF04055.21	gi|288560947|ref|YP_003424433.1|	-	1.9e-24	86.9	1.5	7.4e-24	85.0	0.1	2.2	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|288560947|ref|YP_003424433.1|	-	9.3e-08	32.4	0.3	2.9e-07	30.9	0.0	1.9	1	1	1	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|288560947|ref|YP_003424433.1|	-	4e-07	30.2	0.3	2e-05	24.7	0.0	2.7	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
QueF	PF14489.6	gi|288560948|ref|YP_003424434.1|	-	0.03	14.5	0.0	0.053	13.7	0.0	1.4	1	0	0	1	1	1	0	QueF-like	protein
CarS-like	PF01864.17	gi|288560949|ref|YP_003424435.1|	-	8.2e-61	205.0	14.4	1e-60	204.7	14.4	1.1	1	0	0	1	1	1	1	CDP-archaeol	synthase
CTP_transf_1	PF01148.20	gi|288560949|ref|YP_003424435.1|	-	6.4e-05	22.9	6.9	6.4e-05	22.9	6.9	2.1	1	1	0	1	1	1	1	Cytidylyltransferase	family
SNN_transmemb	PF09049.10	gi|288560950|ref|YP_003424436.1|	-	7.6	6.6	8.4	2.1	8.4	4.9	1.9	2	0	0	2	2	2	0	Stannin	transmembrane
Hydantoinase_A	PF01968.18	gi|288560951|ref|YP_003424437.1|	-	1.3e-24	86.9	2.0	2.9e-23	82.6	1.0	2.0	2	0	0	2	2	2	1	Hydantoinase/oxoprolinase
Hydant_A_N	PF05378.13	gi|288560951|ref|YP_003424437.1|	-	0.00062	19.5	1.8	0.55	9.9	0.1	2.5	2	0	0	2	2	2	2	Hydantoinase/oxoprolinase	N-terminal	region
MutL	PF13941.6	gi|288560951|ref|YP_003424437.1|	-	0.00088	18.0	0.1	0.03	12.9	0.0	2.2	2	0	0	2	2	2	1	MutL	protein
Beta_helix_2	PF18835.1	gi|288560951|ref|YP_003424437.1|	-	0.047	13.5	0.1	0.22	11.3	0.0	2.0	2	0	0	2	2	2	0	Beta	helix	repeat	of	Inulin	fructotransferase
DUF1877	PF08974.10	gi|288560951|ref|YP_003424437.1|	-	0.079	13.0	0.0	0.15	12.1	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1877)
Pan_kinase	PF03309.14	gi|288560951|ref|YP_003424437.1|	-	0.11	12.3	0.1	0.18	11.6	0.1	1.4	1	1	0	1	1	1	0	Type	III	pantothenate	kinase
ATP-grasp_3	PF02655.14	gi|288560952|ref|YP_003424438.1|	-	3.8e-38	131.1	0.4	6.4e-37	127.1	0.1	2.3	2	0	0	2	2	2	1	ATP-grasp	domain
ATPgrasp_Ter	PF15632.6	gi|288560952|ref|YP_003424438.1|	-	0.00033	20.4	0.0	0.00063	19.5	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
Baculo_DNA_bind	PF04786.12	gi|288560952|ref|YP_003424438.1|	-	0.03	13.7	0.3	0.046	13.1	0.3	1.3	1	0	0	1	1	1	0	ssDNA	binding	protein
preATP-grasp_3	PF18301.1	gi|288560952|ref|YP_003424438.1|	-	0.035	14.4	0.0	0.064	13.5	0.0	1.4	1	0	0	1	1	1	0	pre	ATP-grasp	3	domain
Epimerase_2	PF02350.19	gi|288560953|ref|YP_003424439.1|	-	4e-119	397.5	0.1	4.9e-119	397.2	0.1	1.1	1	0	0	1	1	1	1	UDP-N-acetylglucosamine	2-epimerase
Glyco_trans_4_2	PF13477.6	gi|288560953|ref|YP_003424439.1|	-	5.1e-05	23.3	0.0	0.0017	18.4	0.0	2.5	2	0	0	2	2	2	1	Glycosyl	transferase	4-like
CsgA	PF17334.2	gi|288560953|ref|YP_003424439.1|	-	0.016	15.9	0.2	0.039	14.7	0.2	1.7	1	0	0	1	1	1	0	Minor	curli	fiber	component	A
Peptidase_M50	PF02163.22	gi|288560954|ref|YP_003424440.1|	-	9.1e-06	25.1	15.5	0.0087	15.4	0.5	3.5	2	1	1	3	3	3	2	Peptidase	family	M50
DUF2583	PF10762.9	gi|288560954|ref|YP_003424440.1|	-	3.2	8.2	10.2	1.8	9.0	0.2	3.6	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2583)
DUF447	PF04289.12	gi|288560955|ref|YP_003424441.1|	-	1.8e-35	122.3	0.9	2.2e-35	122.0	0.9	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF447)
Flavin_Reduct	PF01613.18	gi|288560955|ref|YP_003424441.1|	-	0.03	14.4	0.0	0.15	12.1	0.0	1.9	1	1	0	1	1	1	0	Flavin	reductase	like	domain
DUF1198	PF06711.11	gi|288560955|ref|YP_003424441.1|	-	0.037	14.1	0.0	0.079	13.0	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1198)
CmcI	PF04989.12	gi|288560955|ref|YP_003424441.1|	-	0.056	13.1	0.1	0.1	12.3	0.1	1.4	1	0	0	1	1	1	0	Cephalosporin	hydroxylase
DUF2124	PF09897.9	gi|288560956|ref|YP_003424442.1|	-	7.5e-54	181.5	0.0	8.4e-54	181.3	0.0	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2124)
DJ-1_PfpI	PF01965.24	gi|288560956|ref|YP_003424442.1|	-	0.0089	15.8	0.0	0.012	15.5	0.0	1.2	1	0	0	1	1	1	1	DJ-1/PfpI	family
ABC_tran	PF00005.27	gi|288560957|ref|YP_003424443.1|	-	6.6e-36	123.8	0.0	9e-36	123.4	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
SMC_N	PF02463.19	gi|288560957|ref|YP_003424443.1|	-	3.6e-08	33.1	0.4	0.00035	20.1	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_21	PF13304.6	gi|288560957|ref|YP_003424443.1|	-	3.7e-07	30.3	1.8	0.00022	21.1	0.5	2.4	3	0	0	3	3	3	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_22	PF13401.6	gi|288560957|ref|YP_003424443.1|	-	6.6e-05	23.2	0.1	0.0013	19.0	0.1	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.6	gi|288560957|ref|YP_003424443.1|	-	7.1e-05	22.5	0.1	0.00013	21.6	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.6	gi|288560957|ref|YP_003424443.1|	-	0.00029	20.7	0.0	0.0021	17.8	0.0	2.2	1	1	2	3	3	3	1	AAA	ATPase	domain
RsgA_GTPase	PF03193.16	gi|288560957|ref|YP_003424443.1|	-	0.00073	19.5	0.0	0.0015	18.4	0.0	1.5	1	0	0	1	1	1	1	RsgA	GTPase
AAA_16	PF13191.6	gi|288560957|ref|YP_003424443.1|	-	0.0064	16.9	0.0	0.012	16.0	0.0	1.5	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_13	PF13166.6	gi|288560957|ref|YP_003424443.1|	-	0.007	15.1	0.0	0.031	12.9	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
AAA_28	PF13521.6	gi|288560957|ref|YP_003424443.1|	-	0.0084	16.4	0.0	0.017	15.4	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
MMR_HSR1	PF01926.23	gi|288560957|ref|YP_003424443.1|	-	0.0084	16.2	1.8	0.099	12.7	1.8	2.6	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
IstB_IS21	PF01695.17	gi|288560957|ref|YP_003424443.1|	-	0.012	15.3	0.0	0.26	11.0	0.0	2.2	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA_23	PF13476.6	gi|288560957|ref|YP_003424443.1|	-	0.013	16.0	0.1	0.029	14.9	0.1	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_18	PF13238.6	gi|288560957|ref|YP_003424443.1|	-	0.027	15.0	0.2	0.14	12.7	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
AAA_25	PF13481.6	gi|288560957|ref|YP_003424443.1|	-	0.042	13.4	0.0	0.51	9.9	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
RTX	PF02382.15	gi|288560957|ref|YP_003424443.1|	-	0.05	13.3	0.0	0.076	12.7	0.0	1.2	1	0	0	1	1	1	0	N-terminal	domain	in	RTX	protein
Dynamin_N	PF00350.23	gi|288560957|ref|YP_003424443.1|	-	0.13	12.3	0.8	0.39	10.8	0.3	1.9	2	0	0	2	2	2	0	Dynamin	family
MacB_PCD	PF12704.7	gi|288560958|ref|YP_003424444.1|	-	1.3e-19	71.3	8.8	1.3e-19	71.3	8.8	2.2	4	0	0	4	4	4	1	MacB-like	periplasmic	core	domain
FtsX	PF02687.21	gi|288560958|ref|YP_003424444.1|	-	3.7e-15	56.2	4.4	3.7e-15	56.2	4.4	3.0	3	0	0	3	3	3	2	FtsX-like	permease	family
PseudoU_synth_1	PF01416.20	gi|288560959|ref|YP_003424445.1|	-	1.9e-29	102.3	0.0	7.4e-22	77.9	0.0	2.1	2	0	0	2	2	2	2	tRNA	pseudouridine	synthase
DUF2344	PF10105.9	gi|288560959|ref|YP_003424445.1|	-	0.098	12.5	0.0	0.16	11.8	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2344)
NUDIX	PF00293.28	gi|288560960|ref|YP_003424446.1|	-	1e-16	61.2	0.0	2.3e-16	60.0	0.0	1.5	1	0	0	1	1	1	1	NUDIX	domain
zf-NADH-PPase	PF09297.11	gi|288560960|ref|YP_003424446.1|	-	1.5e-10	40.5	1.7	2.9e-10	39.6	1.7	1.5	1	0	0	1	1	1	1	NADH	pyrophosphatase	zinc	ribbon	domain
NUDIX-like	PF09296.11	gi|288560960|ref|YP_003424446.1|	-	6.8e-05	23.5	0.0	0.00011	22.8	0.0	1.3	1	0	0	1	1	1	1	NADH	pyrophosphatase-like	rudimentary	NUDIX	domain
OrfB_Zn_ribbon	PF07282.11	gi|288560960|ref|YP_003424446.1|	-	0.001	18.9	0.4	0.003	17.4	0.4	1.8	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
DUF1451	PF07295.11	gi|288560960|ref|YP_003424446.1|	-	0.017	15.1	0.9	0.05	13.6	0.9	1.7	1	0	0	1	1	1	0	Zinc-ribbon	containing	domain
DUF2072	PF09845.9	gi|288560960|ref|YP_003424446.1|	-	0.018	15.3	1.5	0.022	15.0	0.2	1.8	2	0	0	2	2	2	0	Zn-ribbon	containing	protein
DZR	PF12773.7	gi|288560960|ref|YP_003424446.1|	-	0.019	15.0	1.6	0.038	14.0	1.6	1.5	1	0	0	1	1	1	0	Double	zinc	ribbon
Ribosomal_L37e	PF01907.19	gi|288560960|ref|YP_003424446.1|	-	0.056	13.6	1.1	0.15	12.3	0.6	1.9	2	0	0	2	2	2	0	Ribosomal	protein	L37e
zinc-ribbons_6	PF07191.12	gi|288560960|ref|YP_003424446.1|	-	0.083	12.9	0.7	0.19	11.8	0.7	1.5	1	0	0	1	1	1	0	zinc-ribbons
NOB1_Zn_bind	PF08772.11	gi|288560960|ref|YP_003424446.1|	-	0.72	10.1	3.2	7.3	6.8	0.2	2.3	1	1	1	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
zf-C3HC4	PF00097.25	gi|288560960|ref|YP_003424446.1|	-	0.93	9.4	4.1	0.34	10.8	0.9	1.9	2	0	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
zinc_ribbon_2	PF13240.6	gi|288560960|ref|YP_003424446.1|	-	1.1	9.1	6.1	11	5.9	0.6	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
DNA_RNApol_7kD	PF03604.13	gi|288560960|ref|YP_003424446.1|	-	2.3	7.9	5.8	0.39	10.4	0.7	2.3	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-ribbon_3	PF13248.6	gi|288560960|ref|YP_003424446.1|	-	3.9	7.0	6.7	1.6	8.3	3.4	2.1	2	1	0	2	2	2	0	zinc-ribbon	domain
ABC_tran	PF00005.27	gi|288560961|ref|YP_003424447.1|	-	1.1e-21	77.8	0.0	1.4e-21	77.4	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_29	PF13555.6	gi|288560961|ref|YP_003424447.1|	-	0.00041	20.0	1.2	0.0012	18.5	0.1	2.1	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
AAA_30	PF13604.6	gi|288560961|ref|YP_003424447.1|	-	0.00091	19.0	0.0	0.0016	18.2	0.0	1.3	1	1	0	1	1	1	1	AAA	domain
RsgA_GTPase	PF03193.16	gi|288560961|ref|YP_003424447.1|	-	0.0011	18.9	0.6	0.0033	17.3	0.0	1.8	2	0	0	2	2	2	1	RsgA	GTPase
SMC_N	PF02463.19	gi|288560961|ref|YP_003424447.1|	-	0.0014	18.1	0.2	0.84	9.0	0.0	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_22	PF13401.6	gi|288560961|ref|YP_003424447.1|	-	0.0025	18.1	1.4	0.019	15.2	1.4	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.6	gi|288560961|ref|YP_003424447.1|	-	0.0033	17.2	1.0	0.0044	16.8	1.0	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_23	PF13476.6	gi|288560961|ref|YP_003424447.1|	-	0.0044	17.5	0.9	0.014	15.9	0.9	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.6	gi|288560961|ref|YP_003424447.1|	-	0.006	17.1	0.0	0.0098	16.4	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
PduV-EutP	PF10662.9	gi|288560961|ref|YP_003424447.1|	-	0.0069	16.1	0.8	0.017	14.9	0.1	1.9	2	0	0	2	2	2	1	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_21	PF13304.6	gi|288560961|ref|YP_003424447.1|	-	0.0083	16.0	0.2	0.013	15.4	0.1	1.5	1	1	1	2	2	2	1	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
CLP1_P	PF16575.5	gi|288560961|ref|YP_003424447.1|	-	0.014	15.2	0.2	0.026	14.3	0.0	1.5	2	0	0	2	2	2	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
Zeta_toxin	PF06414.12	gi|288560961|ref|YP_003424447.1|	-	0.02	14.2	0.0	0.052	12.8	0.0	1.6	2	0	0	2	2	2	0	Zeta	toxin
AAA_PrkA	PF08298.11	gi|288560961|ref|YP_003424447.1|	-	0.024	13.5	0.0	0.03	13.2	0.0	1.3	1	1	0	1	1	1	0	PrkA	AAA	domain
MeaB	PF03308.16	gi|288560961|ref|YP_003424447.1|	-	0.046	12.7	0.0	0.072	12.1	0.0	1.2	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
Rad17	PF03215.15	gi|288560961|ref|YP_003424447.1|	-	0.053	13.4	0.0	0.099	12.6	0.0	1.4	1	0	0	1	1	1	0	Rad17	P-loop	domain
AAA_16	PF13191.6	gi|288560961|ref|YP_003424447.1|	-	0.07	13.5	0.0	0.091	13.1	0.0	1.3	1	1	0	1	1	1	0	AAA	ATPase	domain
MMR_HSR1	PF01926.23	gi|288560961|ref|YP_003424447.1|	-	0.13	12.4	0.1	0.28	11.3	0.0	1.6	2	0	0	2	2	2	0	50S	ribosome-binding	GTPase
AAA_5	PF07728.14	gi|288560961|ref|YP_003424447.1|	-	0.18	11.8	0.1	1	9.3	0.0	2.1	2	1	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
ABC_tran	PF00005.27	gi|288560962|ref|YP_003424448.1|	-	5.2e-22	78.8	0.3	1.4e-21	77.4	0.0	1.8	2	0	0	2	2	2	1	ABC	transporter
oligo_HPY	PF08352.12	gi|288560962|ref|YP_003424448.1|	-	1.4e-10	41.5	0.0	3.1e-10	40.4	0.0	1.7	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.6	gi|288560962|ref|YP_003424448.1|	-	0.0031	17.4	0.2	0.2	11.4	0.0	2.2	1	1	1	2	2	2	1	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
Mg_chelatase	PF01078.21	gi|288560962|ref|YP_003424448.1|	-	0.011	15.1	0.0	0.022	14.2	0.0	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_15	PF13175.6	gi|288560962|ref|YP_003424448.1|	-	0.016	14.9	0.0	0.17	11.5	0.0	2.2	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_29	PF13555.6	gi|288560962|ref|YP_003424448.1|	-	0.026	14.3	0.1	0.052	13.3	0.1	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.6	gi|288560962|ref|YP_003424448.1|	-	0.028	14.8	2.1	0.034	14.5	0.0	2.0	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_22	PF13401.6	gi|288560962|ref|YP_003424448.1|	-	0.056	13.7	0.1	0.24	11.7	0.1	2.1	1	1	0	1	1	1	0	AAA	domain
SMC_N	PF02463.19	gi|288560962|ref|YP_003424448.1|	-	0.058	12.8	0.2	0.6	9.5	0.2	2.2	1	1	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
IstB_IS21	PF01695.17	gi|288560962|ref|YP_003424448.1|	-	0.059	13.1	0.0	0.11	12.3	0.0	1.3	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
DUF87	PF01935.17	gi|288560962|ref|YP_003424448.1|	-	0.25	11.4	0.0	0.25	11.4	0.0	2.6	2	1	0	2	2	2	0	Helicase	HerA,	central	domain
Acetyltransf_1	PF00583.25	gi|288560963|ref|YP_003424449.1|	-	2e-17	63.5	0.3	2.3e-17	63.3	0.3	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.7	gi|288560963|ref|YP_003424449.1|	-	1.3e-11	44.5	0.0	2.4e-11	43.7	0.0	1.5	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.7	gi|288560963|ref|YP_003424449.1|	-	8.3e-10	39.0	0.3	1.2e-09	38.4	0.3	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.7	gi|288560963|ref|YP_003424449.1|	-	4.1e-08	33.5	1.4	1e-07	32.2	1.4	1.5	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.6	gi|288560963|ref|YP_003424449.1|	-	1.3e-05	25.2	0.1	2.3e-05	24.5	0.1	1.4	1	0	0	1	1	1	1	GCN5-related	N-acetyl-transferase
Acetyltransf_15	PF17013.5	gi|288560963|ref|YP_003424449.1|	-	6.3e-05	22.5	0.7	6.6e-05	22.5	0.7	1.2	1	0	0	1	1	1	1	Putative	acetyl-transferase
Acetyltransf_9	PF13527.7	gi|288560963|ref|YP_003424449.1|	-	0.00023	21.2	0.0	0.00043	20.4	0.0	1.5	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.10	gi|288560963|ref|YP_003424449.1|	-	0.0012	18.8	0.0	0.0017	18.3	0.0	1.2	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_6	PF13480.7	gi|288560963|ref|YP_003424449.1|	-	0.037	14.2	0.1	0.75	10.0	0.1	2.1	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
BPD_transp_1	PF00528.22	gi|288560964|ref|YP_003424450.1|	-	7.9e-21	74.6	9.7	7.9e-21	74.6	9.7	2.3	1	1	2	3	3	3	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.22	gi|288560965|ref|YP_003424451.1|	-	1.4e-40	139.0	8.7	1.4e-40	139.0	8.7	1.9	2	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
SBP_bac_5	PF00496.22	gi|288560966|ref|YP_003424452.1|	-	1.4e-71	241.5	12.1	1.9e-71	241.0	12.1	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
Fer4_16	PF13484.6	gi|288560967|ref|YP_003424453.1|	-	3.3e-08	34.3	7.1	5.8e-08	33.6	7.1	1.4	1	0	0	1	1	1	1	4Fe-4S	double	cluster	binding	domain
Fer4	PF00037.27	gi|288560967|ref|YP_003424453.1|	-	2.3e-06	27.1	14.0	8.3e-05	22.2	4.1	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|288560967|ref|YP_003424453.1|	-	6.6e-05	23.4	7.2	0.00014	22.4	7.2	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|288560967|ref|YP_003424453.1|	-	0.00027	20.9	10.5	0.052	13.7	3.6	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|288560967|ref|YP_003424453.1|	-	0.00049	20.2	9.2	0.0013	18.8	9.3	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|288560967|ref|YP_003424453.1|	-	0.0046	17.1	11.3	0.058	13.6	2.5	2.3	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|288560967|ref|YP_003424453.1|	-	0.0091	16.4	7.0	0.029	14.8	7.1	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|288560967|ref|YP_003424453.1|	-	0.057	13.6	7.0	0.74	10.0	0.9	2.3	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|288560967|ref|YP_003424453.1|	-	0.096	12.8	13.0	0.85	9.9	2.3	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|288560967|ref|YP_003424453.1|	-	0.15	12.6	9.7	2.2	9.0	1.4	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_3	PF12798.7	gi|288560967|ref|YP_003424453.1|	-	2.3	9.4	13.3	4.5	8.4	1.1	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|288560967|ref|YP_003424453.1|	-	7.9	7.1	8.2	16	6.1	2.8	2.4	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_17	PF13534.6	gi|288560967|ref|YP_003424453.1|	-	8.9	6.9	12.8	9.7	6.8	3.5	2.5	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Acetyltransf_1	PF00583.25	gi|288560968|ref|YP_003424454.1|	-	4.3e-14	52.8	0.1	5.4e-14	52.4	0.1	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.7	gi|288560968|ref|YP_003424454.1|	-	5.5e-11	42.5	0.0	1.5e-10	41.1	0.0	1.7	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.7	gi|288560968|ref|YP_003424454.1|	-	7.8e-09	35.8	0.1	1.2e-08	35.3	0.1	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.7	gi|288560968|ref|YP_003424454.1|	-	1.9e-07	31.3	0.8	4.2e-07	30.2	0.8	1.6	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_15	PF17013.5	gi|288560968|ref|YP_003424454.1|	-	0.0017	17.9	0.6	0.002	17.6	0.6	1.2	1	0	0	1	1	1	1	Putative	acetyl-transferase
Acetyltransf_CG	PF14542.6	gi|288560968|ref|YP_003424454.1|	-	0.032	14.3	0.0	0.056	13.6	0.0	1.4	1	0	0	1	1	1	0	GCN5-related	N-acetyl-transferase
Acetyltransf_3	PF13302.7	gi|288560968|ref|YP_003424454.1|	-	0.12	13.0	0.0	0.16	12.7	0.0	1.2	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
ABC2_membrane_4	PF12730.7	gi|288560969|ref|YP_003424455.1|	-	1.2e-31	110.0	28.2	1.2e-31	110.0	28.2	1.9	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.7	gi|288560969|ref|YP_003424455.1|	-	6.1e-11	42.1	33.4	4.1e-10	39.4	33.4	2.2	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_5	PF13346.6	gi|288560969|ref|YP_003424455.1|	-	0.0013	18.3	39.1	0.0079	15.8	38.5	2.4	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC_tran	PF00005.27	gi|288560970|ref|YP_003424456.1|	-	1.2e-25	90.7	0.0	1.9e-25	90.0	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|288560970|ref|YP_003424456.1|	-	1.1e-09	38.5	7.5	3.2e-08	33.8	0.1	3.0	2	1	0	3	3	3	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
CbiA	PF01656.23	gi|288560970|ref|YP_003424456.1|	-	0.00016	21.7	0.0	0.00049	20.2	0.0	1.9	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_22	PF13401.6	gi|288560970|ref|YP_003424456.1|	-	0.0027	18.0	0.0	0.018	15.3	0.0	2.1	1	1	0	1	1	1	1	AAA	domain
Fer4_NifH	PF00142.18	gi|288560970|ref|YP_003424456.1|	-	0.012	15.0	0.0	0.031	13.7	0.0	1.7	1	0	0	1	1	1	0	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
AAA_23	PF13476.6	gi|288560970|ref|YP_003424456.1|	-	0.073	13.6	0.4	0.29	11.6	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
AAA_7	PF12775.7	gi|288560970|ref|YP_003424456.1|	-	0.073	12.6	0.0	0.13	11.8	0.0	1.3	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
RAMPs	PF03787.15	gi|288560971|ref|YP_003424457.1|	-	0.0081	16.2	0.3	0.0081	16.2	0.3	1.2	1	0	0	1	1	1	1	RAMP	superfamily
DUF5097	PF17020.5	gi|288560971|ref|YP_003424457.1|	-	0.17	12.2	5.7	0.094	13.1	2.7	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF5097)
Fer4	PF00037.27	gi|288560972|ref|YP_003424458.1|	-	8.6e-05	22.2	0.8	0.00012	21.8	0.8	1.2	1	0	0	1	1	1	1	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|288560972|ref|YP_003424458.1|	-	0.0002	21.9	0.1	0.0002	21.9	0.1	1.1	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|288560972|ref|YP_003424458.1|	-	0.003	17.7	0.1	0.003	17.7	0.1	1.1	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|288560972|ref|YP_003424458.1|	-	0.011	16.6	0.0	0.011	16.6	0.0	1.1	1	0	0	1	1	1	0	4Fe-4S	double	cluster	binding	domain
Fer4_6	PF12837.7	gi|288560972|ref|YP_003424458.1|	-	0.013	15.5	1.3	0.018	15.1	1.3	1.2	1	0	0	1	1	1	0	4Fe-4S	binding	domain
Fer4_3	PF12798.7	gi|288560972|ref|YP_003424458.1|	-	0.016	16.1	2.2	0.02	15.8	2.2	1.2	1	0	0	1	1	1	0	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|288560972|ref|YP_003424458.1|	-	0.029	14.5	0.2	0.03	14.4	0.2	1.1	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
His_biosynth	PF00977.21	gi|288560973|ref|YP_003424459.1|	-	2.2e-72	243.2	3.4	2.5e-72	243.0	3.4	1.0	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
Dus	PF01207.17	gi|288560973|ref|YP_003424459.1|	-	1e-08	34.7	0.0	0.0022	17.1	0.0	2.2	2	0	0	2	2	2	2	Dihydrouridine	synthase	(Dus)
PcrB	PF01884.17	gi|288560973|ref|YP_003424459.1|	-	2e-06	27.5	1.7	0.0017	17.9	0.1	2.3	1	1	0	2	2	2	2	PcrB	family
ThiG	PF05690.14	gi|288560973|ref|YP_003424459.1|	-	4.9e-06	26.0	0.1	0.04	13.2	0.0	2.5	2	1	1	3	3	3	2	Thiazole	biosynthesis	protein	ThiG
Trp_syntA	PF00290.20	gi|288560973|ref|YP_003424459.1|	-	5.5e-05	22.2	0.1	0.012	14.5	0.0	2.4	2	1	0	2	2	2	2	Tryptophan	synthase	alpha	chain
NMO	PF03060.15	gi|288560973|ref|YP_003424459.1|	-	0.00012	21.6	0.5	0.00029	20.4	0.1	1.7	2	1	0	2	2	2	1	Nitronate	monooxygenase
IGPS	PF00218.21	gi|288560973|ref|YP_003424459.1|	-	0.00043	19.5	0.1	0.031	13.5	0.0	2.8	2	1	1	3	3	3	1	Indole-3-glycerol	phosphate	synthase
TMP-TENI	PF02581.17	gi|288560973|ref|YP_003424459.1|	-	0.00067	19.0	0.2	0.18	11.1	0.0	2.4	2	1	0	2	2	2	2	Thiamine	monophosphate	synthase
IMPDH	PF00478.25	gi|288560973|ref|YP_003424459.1|	-	0.0012	17.9	2.2	0.25	10.3	0.1	2.1	2	0	0	2	2	2	2	IMP	dehydrogenase	/	GMP	reductase	domain
DHO_dh	PF01180.21	gi|288560973|ref|YP_003424459.1|	-	0.0026	17.0	0.3	0.038	13.2	0.0	2.1	2	0	0	2	2	2	1	Dihydroorotate	dehydrogenase
Ribul_P_3_epim	PF00834.19	gi|288560973|ref|YP_003424459.1|	-	0.02	14.3	1.0	2.5	7.4	0.1	2.9	2	1	1	3	3	3	0	Ribulose-phosphate	3	epimerase	family
PapG_C	PF03628.13	gi|288560973|ref|YP_003424459.1|	-	0.11	12.4	0.1	2.1	8.3	0.0	2.5	2	1	1	3	3	3	0	PapG	chaperone-binding	domain
Peripla_BP_1	PF00532.21	gi|288560973|ref|YP_003424459.1|	-	0.14	11.6	0.1	8.2	5.8	0.0	2.2	2	0	0	2	2	2	0	Periplasmic	binding	proteins	and	sugar	binding	domain	of	LacI	family
FMN_dh	PF01070.18	gi|288560973|ref|YP_003424459.1|	-	0.19	10.7	0.5	2.6	7.0	0.1	2.1	2	0	0	2	2	2	0	FMN-dependent	dehydrogenase
CTP_transf_like	PF01467.26	gi|288560974|ref|YP_003424460.1|	-	1.4e-18	67.5	0.1	1.6e-18	67.3	0.1	1.1	1	0	0	1	1	1	1	Cytidylyltransferase-like
FAD_syn	PF06574.12	gi|288560974|ref|YP_003424460.1|	-	0.001	19.0	0.2	0.0029	17.5	0.2	1.9	1	1	0	1	1	1	1	FAD	synthetase
Lactamase_B_3	PF13483.6	gi|288560974|ref|YP_003424460.1|	-	0.071	13.0	0.1	0.55	10.1	0.1	2.0	1	1	0	1	1	1	0	Beta-lactamase	superfamily	domain
Semialdhyde_dh	PF01118.24	gi|288560975|ref|YP_003424461.1|	-	9.6e-34	116.4	0.0	1.5e-33	115.8	0.0	1.3	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Semialdhyde_dhC	PF02774.18	gi|288560975|ref|YP_003424461.1|	-	1.7e-26	93.4	0.0	2.6e-26	92.8	0.0	1.3	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
DapB_N	PF01113.20	gi|288560975|ref|YP_003424461.1|	-	0.031	14.4	0.0	0.11	12.6	0.0	1.9	2	0	0	2	2	2	0	Dihydrodipicolinate	reductase,	N-terminus
CoA_binding_2	PF13380.6	gi|288560975|ref|YP_003424461.1|	-	0.16	12.5	0.0	0.33	11.4	0.0	1.5	1	0	0	1	1	1	0	CoA	binding	domain
Flavodoxin_5	PF12724.7	gi|288560976|ref|YP_003424462.1|	-	1.4e-08	35.1	0.0	0.0066	16.7	0.0	2.1	1	1	1	2	2	2	2	Flavodoxin	domain
Flavodoxin_4	PF12682.7	gi|288560976|ref|YP_003424462.1|	-	4.4e-07	29.7	0.1	3.6e-06	26.8	0.1	2.0	1	1	0	1	1	1	1	Flavodoxin
Flavodoxin_3	PF12641.7	gi|288560976|ref|YP_003424462.1|	-	0.00051	19.8	0.0	0.59	9.8	0.0	2.2	1	1	1	2	2	2	2	Flavodoxin	domain
Flavodoxin_1	PF00258.25	gi|288560976|ref|YP_003424462.1|	-	0.00071	19.8	0.2	0.052	13.7	0.0	2.6	1	1	0	2	2	2	1	Flavodoxin
FMN_red	PF03358.15	gi|288560976|ref|YP_003424462.1|	-	0.011	15.5	0.0	0.014	15.1	0.0	1.2	1	0	0	1	1	1	0	NADPH-dependent	FMN	reductase
ANF_receptor	PF01094.28	gi|288560976|ref|YP_003424462.1|	-	0.025	13.7	0.0	0.03	13.4	0.0	1.1	1	0	0	1	1	1	0	Receptor	family	ligand	binding	region
SecD_SecF	PF02355.16	gi|288560977|ref|YP_003424463.1|	-	3.5e-40	137.4	11.4	5.4e-40	136.8	11.4	1.3	1	0	0	1	1	1	1	Protein	export	membrane	protein
Presenilin	PF01080.17	gi|288560977|ref|YP_003424463.1|	-	0.00013	20.9	3.0	0.00013	20.9	3.0	1.8	2	0	0	2	2	2	1	Presenilin
Sec_GG	PF07549.14	gi|288560977|ref|YP_003424463.1|	-	0.016	14.7	0.1	0.038	13.5	0.1	1.7	1	0	0	1	1	1	0	SecD/SecF	GG	Motif
Wzy_C	PF04932.15	gi|288560977|ref|YP_003424463.1|	-	0.037	13.6	1.7	0.65	9.6	0.0	2.7	3	0	0	3	3	3	0	O-Antigen	ligase
MMPL	PF03176.15	gi|288560977|ref|YP_003424463.1|	-	0.26	10.2	17.0	0.48	9.3	17.0	1.3	1	0	0	1	1	1	0	MMPL	family
DUF4162	PF13732.6	gi|288560977|ref|YP_003424463.1|	-	1.3	9.8	6.4	0.27	12.0	0.6	2.5	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4162)
LMBR1	PF04791.16	gi|288560977|ref|YP_003424463.1|	-	1.5	7.6	9.7	0.29	10.0	0.1	2.3	2	0	0	2	2	2	0	LMBR1-like	membrane	protein
SID-1_RNA_chan	PF13965.6	gi|288560977|ref|YP_003424463.1|	-	2.7	6.3	8.6	7.4	4.8	8.7	1.9	1	1	0	1	1	1	0	dsRNA-gated	channel	SID-1
PHO4	PF01384.20	gi|288560977|ref|YP_003424463.1|	-	3.8	6.5	14.2	0.1	11.6	5.2	2.1	1	1	1	2	2	2	0	Phosphate	transporter	family
SecD_SecF	PF02355.16	gi|288560978|ref|YP_003424464.1|	-	1.6e-20	73.3	8.0	1.6e-20	73.3	8.0	1.4	2	0	0	2	2	2	1	Protein	export	membrane	protein
Sec_GG	PF07549.14	gi|288560978|ref|YP_003424464.1|	-	4.5e-06	26.0	0.0	9.4e-06	25.0	0.0	1.6	1	0	0	1	1	1	1	SecD/SecF	GG	Motif
BAT	PF15915.5	gi|288560978|ref|YP_003424464.1|	-	0.14	12.1	1.9	7.3	6.4	0.6	2.3	1	1	1	2	2	2	0	GAF	and	HTH_10	associated	domain
ACR_tran	PF00873.19	gi|288560978|ref|YP_003424464.1|	-	1.7	6.2	11.6	0.2	9.3	6.9	1.8	2	0	0	2	2	2	0	AcrB/AcrD/AcrF	family
Herpes_US9	PF06072.11	gi|288560978|ref|YP_003424464.1|	-	6	6.8	8.0	1	9.3	0.2	3.2	4	0	0	4	4	4	0	Alphaherpesvirus	tegument	protein	US9
GMC_oxred_N	PF00732.19	gi|288560979|ref|YP_003424465.1|	-	4e-20	72.4	0.0	9.4e-18	64.6	0.0	2.5	2	1	0	2	2	2	1	GMC	oxidoreductase
GMC_oxred_C	PF05199.13	gi|288560979|ref|YP_003424465.1|	-	3.8e-11	43.7	0.0	8.6e-11	42.5	0.0	1.7	1	0	0	1	1	1	1	GMC	oxidoreductase
DAO	PF01266.24	gi|288560979|ref|YP_003424465.1|	-	1.1e-08	35.1	0.1	0.0024	17.5	0.0	2.2	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.14	gi|288560979|ref|YP_003424465.1|	-	8.6e-08	31.8	2.7	0.0011	18.3	0.1	3.0	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.24	gi|288560979|ref|YP_003424465.1|	-	6.2e-06	25.5	0.0	0.0058	15.8	0.0	2.2	2	0	0	2	2	2	2	FAD	binding	domain
NAD_binding_8	PF13450.6	gi|288560979|ref|YP_003424465.1|	-	2.1e-05	24.7	0.4	0.0004	20.5	0.0	2.5	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
ApbA	PF02558.16	gi|288560979|ref|YP_003424465.1|	-	0.00017	21.3	0.2	0.0066	16.1	0.2	2.5	1	1	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
Pyr_redox_3	PF13738.6	gi|288560979|ref|YP_003424465.1|	-	0.00018	20.9	0.2	0.0072	15.6	0.0	2.2	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.12	gi|288560979|ref|YP_003424465.1|	-	0.00079	18.6	0.1	0.025	13.6	0.0	2.2	2	0	0	2	2	2	1	Lycopene	cyclase	protein
Pyr_redox	PF00070.27	gi|288560979|ref|YP_003424465.1|	-	0.00089	19.8	1.0	0.17	12.5	0.1	3.0	2	1	1	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.22	gi|288560979|ref|YP_003424465.1|	-	0.0026	16.9	0.4	0.27	10.3	0.0	2.2	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
Fer4_10	PF13237.6	gi|288560979|ref|YP_003424465.1|	-	0.0092	16.1	0.1	0.018	15.2	0.1	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
HI0933_like	PF03486.14	gi|288560979|ref|YP_003424465.1|	-	0.03	13.0	4.7	0.029	13.1	1.4	2.1	2	0	0	2	2	2	0	HI0933-like	protein
3HCDH_N	PF02737.18	gi|288560979|ref|YP_003424465.1|	-	0.046	13.6	0.0	0.083	12.8	0.0	1.4	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Fer4_9	PF13187.6	gi|288560979|ref|YP_003424465.1|	-	0.063	13.5	0.8	0.11	12.6	0.8	1.4	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
FAD_binding_3	PF01494.19	gi|288560979|ref|YP_003424465.1|	-	0.1	11.8	1.7	0.4	9.9	0.9	2.0	2	0	0	2	2	2	0	FAD	binding	domain
EamA	PF00892.20	gi|288560980|ref|YP_003424466.1|	-	3.4e-08	33.7	19.4	3.8e-08	33.6	19.4	1.0	1	0	0	1	1	1	1	EamA-like	transporter	family
DUF3624	PF12292.8	gi|288560980|ref|YP_003424466.1|	-	1.6	9.2	5.2	0.23	11.9	0.6	1.9	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3624)
DUF4418	PF14387.6	gi|288560980|ref|YP_003424466.1|	-	5.6	7.2	15.5	2.9	8.1	5.0	2.3	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4418)
PyrI	PF01948.18	gi|288560981|ref|YP_003424467.1|	-	1.5e-32	111.7	2.2	2e-32	111.3	2.2	1.2	1	0	0	1	1	1	1	Aspartate	carbamoyltransferase	regulatory	chain,	allosteric	domain
PyrI_C	PF02748.15	gi|288560981|ref|YP_003424467.1|	-	2.8e-19	68.7	3.2	4.6e-19	68.0	3.2	1.4	1	0	0	1	1	1	1	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
Big_3_5	PF16640.5	gi|288560982|ref|YP_003424468.1|	-	1.9e-34	117.7	61.2	4.7e-10	39.5	7.6	13.2	11	2	2	13	13	13	8	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|288560982|ref|YP_003424468.1|	-	5e-16	58.4	36.0	8e-07	29.0	2.7	9.0	9	0	0	9	9	9	4	Bacterial	Ig-like	domain	(group	1)
Big_2	PF02368.18	gi|288560982|ref|YP_003424468.1|	-	1.4e-13	50.5	21.5	5.5e-05	23.0	1.3	6.1	5	0	0	5	5	5	4	Bacterial	Ig-like	domain	(group	2)
CarboxypepD_reg	PF13620.6	gi|288560982|ref|YP_003424468.1|	-	1.2e-11	44.7	20.6	0.0015	18.8	0.2	8.6	8	1	2	10	10	10	4	Carboxypeptidase	regulatory-like	domain
MG4	PF17789.1	gi|288560982|ref|YP_003424468.1|	-	1.6e-08	34.6	8.0	0.038	14.1	0.0	6.5	6	0	0	6	6	6	2	Macroglobulin	domain	MG4
Invasin_D3	PF09134.10	gi|288560982|ref|YP_003424468.1|	-	2.6e-07	30.8	51.3	1.7e-05	25.0	8.3	10.2	10	0	0	10	10	10	3	Invasin,	domain	3
Beta_helix	PF13229.6	gi|288560982|ref|YP_003424468.1|	-	0.0039	17.1	9.7	0.0039	17.1	9.7	10.9	5	4	4	10	10	7	4	Right	handed	beta	helix	region
DUF2553	PF10830.8	gi|288560982|ref|YP_003424468.1|	-	0.05	14.4	0.9	3.4	8.5	0.1	3.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2553)
PH_10	PF15411.6	gi|288560982|ref|YP_003424468.1|	-	0.14	12.4	0.2	1.6	9.0	0.1	2.8	2	0	0	2	2	2	0	Pleckstrin	homology	domain
U71	PF17474.2	gi|288560982|ref|YP_003424468.1|	-	0.21	11.6	0.4	0.77	9.7	0.4	2.0	1	0	0	1	1	1	0	Tegument	protein	UL11	homolog
Pentapeptide_4	PF13599.6	gi|288560982|ref|YP_003424468.1|	-	2.3	8.5	9.7	27	5.0	2.6	4.1	3	0	0	3	3	3	0	Pentapeptide	repeats	(9	copies)
PmbA_TldD	PF01523.16	gi|288560983|ref|YP_003424469.1|	-	9e-57	193.0	3.0	1.2e-56	192.6	3.0	1.2	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
Biotin_lipoyl_2	PF13533.6	gi|288560983|ref|YP_003424469.1|	-	0.063	13.1	0.1	0.16	11.8	0.1	1.7	1	0	0	1	1	1	0	Biotin-lipoyl	like
DUF1748	PF08520.10	gi|288560983|ref|YP_003424469.1|	-	0.074	13.0	0.1	2.9	7.9	0.0	2.4	2	0	0	2	2	2	0	Fungal	protein	of	unknown	function	(DUF1748)
AMMECR1	PF01871.17	gi|288560984|ref|YP_003424470.1|	-	9e-53	178.3	0.0	1e-52	178.1	0.0	1.0	1	0	0	1	1	1	1	AMMECR1
NOG1_N	PF17835.1	gi|288560985|ref|YP_003424471.1|	-	6.5e-41	140.0	0.0	9.7e-41	139.4	0.0	1.3	1	0	0	1	1	1	1	NOG1	N-terminal	helical	domain
NOG1	PF06858.14	gi|288560985|ref|YP_003424471.1|	-	2e-23	81.9	0.2	4.3e-23	80.9	0.2	1.6	1	0	0	1	1	1	1	Nucleolar	GTP-binding	protein	1	(NOG1)
MMR_HSR1	PF01926.23	gi|288560985|ref|YP_003424471.1|	-	3.6e-21	75.4	0.0	7e-21	74.4	0.0	1.5	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.18	gi|288560985|ref|YP_003424471.1|	-	6.6e-15	55.0	0.0	1e-14	54.4	0.0	1.3	1	0	0	1	1	1	1	Ferrous	iron	transport	protein	B
Ras	PF00071.22	gi|288560985|ref|YP_003424471.1|	-	0.00022	20.9	0.0	0.0012	18.4	0.0	2.0	1	1	0	1	1	1	1	Ras	family
RsgA_GTPase	PF03193.16	gi|288560985|ref|YP_003424471.1|	-	0.00085	19.3	0.1	1.4	8.8	0.0	2.7	2	1	0	2	2	2	2	RsgA	GTPase
Dynamin_N	PF00350.23	gi|288560985|ref|YP_003424471.1|	-	0.00088	19.4	0.2	0.021	14.9	0.0	2.5	2	1	1	3	3	3	1	Dynamin	family
GTP_EFTU	PF00009.27	gi|288560985|ref|YP_003424471.1|	-	0.00089	18.8	0.1	0.29	10.6	0.0	2.9	1	1	1	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
AIG1	PF04548.16	gi|288560985|ref|YP_003424471.1|	-	0.0037	16.6	0.0	0.0064	15.8	0.0	1.4	1	1	0	1	1	1	1	AIG1	family
cobW	PF02492.19	gi|288560985|ref|YP_003424471.1|	-	0.0057	16.3	0.0	1.4	8.5	0.0	2.2	2	0	0	2	2	2	2	CobW/HypB/UreG,	nucleotide-binding	domain
Arf	PF00025.21	gi|288560985|ref|YP_003424471.1|	-	0.015	14.8	0.1	2.7	7.4	0.0	2.4	2	0	0	2	2	2	0	ADP-ribosylation	factor	family
MMR_HSR1_Xtn	PF16897.5	gi|288560985|ref|YP_003424471.1|	-	0.036	14.1	0.2	0.11	12.6	0.1	1.8	2	0	0	2	2	2	0	C-terminal	region	of	MMR_HSR1	domain
MeaB	PF03308.16	gi|288560985|ref|YP_003424471.1|	-	0.037	13.0	0.0	2.4	7.1	0.0	2.4	2	1	0	2	2	2	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
NACHT	PF05729.12	gi|288560985|ref|YP_003424471.1|	-	0.13	12.2	0.0	1	9.3	0.0	2.3	1	1	0	1	1	1	0	NACHT	domain
HSP20	PF00011.21	gi|288560986|ref|YP_003424472.1|	-	2.2e-12	47.0	1.3	6.2e-12	45.6	0.1	2.1	2	1	0	2	2	2	1	Hsp20/alpha	crystallin	family
ArsA_HSP20	PF17886.1	gi|288560986|ref|YP_003424472.1|	-	0.0042	16.6	0.0	0.0079	15.7	0.0	1.5	1	1	0	1	1	1	1	HSP20-like	domain	found	in	ArsA
Pex19	PF04614.12	gi|288560986|ref|YP_003424472.1|	-	0.092	12.5	5.3	0.12	12.1	5.3	1.2	1	0	0	1	1	1	0	Pex19	protein	family
ARD	PF03079.14	gi|288560986|ref|YP_003424472.1|	-	0.32	11.2	5.0	0.49	10.6	5.0	1.3	1	0	0	1	1	1	0	ARD/ARD'	family
YtxH	PF12732.7	gi|288560986|ref|YP_003424472.1|	-	4	8.0	13.5	13	6.4	9.6	2.8	1	1	1	2	2	2	0	YtxH-like	protein
CBFD_NFYB_HMF	PF00808.23	gi|288560987|ref|YP_003424473.1|	-	6e-15	55.3	3.7	6.5e-15	55.2	3.7	1.0	1	0	0	1	1	1	1	Histone-like	transcription	factor	(CBF/NF-Y)	and	archaeal	histone
Histone	PF00125.24	gi|288560987|ref|YP_003424473.1|	-	6.1e-10	39.6	0.7	6.9e-10	39.4	0.7	1.1	1	0	0	1	1	1	1	Core	histone	H2A/H2B/H3/H4
CENP-S	PF15630.6	gi|288560987|ref|YP_003424473.1|	-	0.00019	21.7	0.1	0.00021	21.6	0.1	1.1	1	0	0	1	1	1	1	CENP-S	protein
TAF	PF02969.17	gi|288560987|ref|YP_003424473.1|	-	0.00055	20.0	1.5	0.00059	20.0	1.5	1.0	1	0	0	1	1	1	1	TATA	box	binding	protein	associated	factor	(TAF)
CENP-T_C	PF15511.6	gi|288560987|ref|YP_003424473.1|	-	0.0009	19.3	0.2	0.00093	19.3	0.2	1.0	1	0	0	1	1	1	1	Centromere	kinetochore	component	CENP-T	histone	fold
Bromo_TP	PF07524.13	gi|288560987|ref|YP_003424473.1|	-	0.0012	18.8	0.0	0.0014	18.6	0.0	1.0	1	0	0	1	1	1	1	Bromodomain	associated
TFIID-31kDa	PF02291.15	gi|288560987|ref|YP_003424473.1|	-	0.0015	18.6	0.3	0.0017	18.4	0.3	1.0	1	0	0	1	1	1	1	Transcription	initiation	factor	IID,	31kD	subunit
TFIID_20kDa	PF03847.13	gi|288560987|ref|YP_003424473.1|	-	0.08	13.5	0.1	0.087	13.3	0.1	1.1	1	0	0	1	1	1	0	Transcription	initiation	factor	TFIID	subunit	A
FMN_red	PF03358.15	gi|288560988|ref|YP_003424474.1|	-	3e-17	62.8	0.0	3.8e-17	62.5	0.0	1.1	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.17	gi|288560988|ref|YP_003424474.1|	-	3.8e-07	30.0	0.0	4.2e-07	29.9	0.0	1.2	1	0	0	1	1	1	1	Flavodoxin-like	fold
Flavodoxin_5	PF12724.7	gi|288560988|ref|YP_003424474.1|	-	0.0045	17.2	0.0	0.014	15.6	0.0	1.8	2	0	0	2	2	2	1	Flavodoxin	domain
Lectin_legB	PF00139.19	gi|288560988|ref|YP_003424474.1|	-	0.07	12.6	0.0	0.1	12.1	0.0	1.2	1	0	0	1	1	1	0	Legume	lectin	domain
SIS	PF01380.22	gi|288560989|ref|YP_003424475.1|	-	8e-24	84.0	0.1	1.1e-18	67.3	0.1	2.2	2	0	0	2	2	2	2	SIS	domain
bact-PGI_C	PF10432.9	gi|288560989|ref|YP_003424475.1|	-	0.015	15.4	0.0	0.025	14.6	0.0	1.4	1	0	0	1	1	1	0	Bacterial	phospho-glucose	isomerase	C-terminal	SIS	domain
DUF447	PF04289.12	gi|288560990|ref|YP_003424476.1|	-	8.2e-34	116.9	0.2	9.9e-34	116.6	0.2	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF447)
MatE	PF01554.18	gi|288560991|ref|YP_003424477.1|	-	2e-53	180.4	50.0	1.3e-27	96.4	17.3	2.5	3	0	0	3	3	3	2	MatE
Polysacc_synt_C	PF14667.6	gi|288560991|ref|YP_003424477.1|	-	1.5e-06	28.3	29.3	3.3e-05	24.0	14.0	5.2	3	2	2	5	5	5	2	Polysaccharide	biosynthesis	C-terminal	domain
DUF1515	PF07439.11	gi|288560991|ref|YP_003424477.1|	-	0.32	11.0	1.0	0.9	9.6	1.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1515)
DUF2254	PF10011.9	gi|288560991|ref|YP_003424477.1|	-	2.1	7.1	7.6	0.64	8.8	0.2	2.2	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2254)
Adenine_deam_C	PF13382.6	gi|288560992|ref|YP_003424478.1|	-	1.5e-63	213.1	0.1	2.5e-63	212.4	0.1	1.4	1	0	0	1	1	1	1	Adenine	deaminase	C-terminal	domain
Amidohydro_1	PF01979.20	gi|288560992|ref|YP_003424478.1|	-	1.6e-35	123.0	0.2	5.2e-35	121.4	0.2	1.8	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.11	gi|288560992|ref|YP_003424478.1|	-	5.9e-07	29.3	0.0	0.013	15.0	0.0	2.4	2	0	0	2	2	2	2	Amidohydrolase	family
Saccharop_dh_N	PF04455.12	gi|288560993|ref|YP_003424479.1|	-	2.2e-35	121.0	0.1	5.9e-35	119.7	0.0	1.8	2	0	0	2	2	2	1	LOR/SDH	bifunctional	enzyme	conserved	region
DS	PF01916.17	gi|288560993|ref|YP_003424479.1|	-	0.0014	17.9	0.8	0.017	14.4	0.2	2.3	1	1	1	2	2	2	1	Deoxyhypusine	synthase
CPBP	PF02517.16	gi|288560994|ref|YP_003424480.1|	-	3.2e-09	37.0	13.5	1.6e-08	34.8	13.4	2.2	1	1	0	1	1	1	1	CPBP	intramembrane	metalloprotease
LEAP-2	PF07359.11	gi|288560994|ref|YP_003424480.1|	-	0.067	13.0	0.1	0.15	11.9	0.1	1.5	1	0	0	1	1	1	0	Liver-expressed	antimicrobial	peptide	2	precursor	(LEAP-2)
TetR_N	PF00440.23	gi|288560995|ref|YP_003424481.1|	-	5.6e-15	54.9	0.1	9.5e-15	54.1	0.1	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	tetR	family
TetR_C_27	PF17935.1	gi|288560995|ref|YP_003424481.1|	-	0.00059	19.9	0.1	0.007	16.4	0.0	2.4	2	1	1	3	3	3	1	Tetracyclin	repressor-like,	C-terminal	domain
HTH_Tnp_1_2	PF13022.6	gi|288560995|ref|YP_003424481.1|	-	0.0054	16.9	0.1	0.0083	16.3	0.1	1.3	1	0	0	1	1	1	1	Helix-turn-helix	of	insertion	element	transposase
Herpes_ori_bp	PF02399.15	gi|288560995|ref|YP_003424481.1|	-	0.038	12.0	0.0	0.049	11.7	0.0	1.2	1	0	0	1	1	1	0	Origin	of	replication	binding	protein
DUF2294	PF10057.9	gi|288560995|ref|YP_003424481.1|	-	0.097	12.8	1.9	1.4	9.1	0.1	2.4	1	1	1	2	2	2	0	Uncharacterized	conserved	protein	(DUF2294)
Arginase	PF00491.21	gi|288560997|ref|YP_003424483.1|	-	1.3e-64	218.4	0.0	1.6e-64	218.1	0.0	1.0	1	0	0	1	1	1	1	Arginase	family
UPF0489	PF12640.7	gi|288560997|ref|YP_003424483.1|	-	0.089	13.0	0.1	0.2	11.9	0.0	1.5	1	1	0	1	1	1	0	UPF0489	domain
Stap_Strp_toxin	PF01123.20	gi|288560997|ref|YP_003424483.1|	-	0.15	12.9	1.6	1.8	9.4	0.0	2.5	2	0	0	2	2	2	0	Staphylococcal/Streptococcal	toxin,	OB-fold	domain
eIF-5a	PF01287.20	gi|288560998|ref|YP_003424484.1|	-	4.4e-08	33.1	0.2	6.9e-08	32.5	0.2	1.3	1	0	0	1	1	1	1	Eukaryotic	elongation	factor	5A	hypusine,	DNA-binding	OB	fold
EFP	PF01132.20	gi|288560998|ref|YP_003424484.1|	-	0.096	12.7	0.1	0.16	12.0	0.1	1.3	1	0	0	1	1	1	0	Elongation	factor	P	(EF-P)	OB	domain
PvlArgDC	PF01862.16	gi|288560999|ref|YP_003424485.1|	-	6.2e-32	110.7	0.6	6.8e-32	110.5	0.6	1.0	1	0	0	1	1	1	1	Pyruvoyl-dependent	arginine	decarboxylase	(PvlArgDC)
DUF4715	PF15835.5	gi|288560999|ref|YP_003424485.1|	-	0.049	13.7	0.0	0.063	13.3	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4715)
NAD_kinase	PF01513.21	gi|288561000|ref|YP_003424486.1|	-	9.9e-61	205.5	0.3	2.1e-60	204.4	0.2	1.5	2	0	0	2	2	2	1	ATP-NAD	kinase
Inositol_P	PF00459.25	gi|288561000|ref|YP_003424486.1|	-	1e-24	87.5	0.0	1.7e-24	86.8	0.0	1.3	1	0	0	1	1	1	1	Inositol	monophosphatase	family
DAGK_cat	PF00781.24	gi|288561000|ref|YP_003424486.1|	-	0.0018	17.9	0.0	0.0071	16.0	0.0	2.1	2	0	0	2	2	2	1	Diacylglycerol	kinase	catalytic	domain
FBPase	PF00316.20	gi|288561000|ref|YP_003424486.1|	-	0.0022	17.5	0.2	0.72	9.3	0.2	2.7	1	1	0	1	1	1	1	Fructose-1-6-bisphosphatase,	N-terminal	domain
TetR_C_27	PF17935.1	gi|288561000|ref|YP_003424486.1|	-	0.026	14.6	0.0	0.061	13.4	0.0	1.6	1	0	0	1	1	1	0	Tetracyclin	repressor-like,	C-terminal	domain
DUF4119	PF13494.6	gi|288561000|ref|YP_003424486.1|	-	0.056	13.6	0.7	0.22	11.7	0.3	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function,	B.	Theta	Gene	description	(DUF4119)
Mur_ligase_M	PF08245.12	gi|288561001|ref|YP_003424487.1|	-	9.1e-05	22.5	6.1	0.00015	21.8	1.6	3.0	2	1	0	2	2	2	1	Mur	ligase	middle	domain
CaKB	PF03185.15	gi|288561001|ref|YP_003424487.1|	-	0.06	13.0	1.9	0.12	12.0	1.1	1.8	1	1	0	1	1	1	0	Calcium-activated	potassium	channel,	beta	subunit
Methyltransf_18	PF12847.7	gi|288561001|ref|YP_003424487.1|	-	0.16	11.9	3.2	5.6	6.9	0.1	3.1	2	1	1	3	3	3	0	Methyltransferase	domain
Porphobil_deam	PF01379.20	gi|288561002|ref|YP_003424488.1|	-	1.2e-71	240.5	0.0	1.5e-71	240.1	0.0	1.1	1	0	0	1	1	1	1	Porphobilinogen	deaminase,	dipyromethane	cofactor	binding	domain
Porphobil_deamC	PF03900.15	gi|288561002|ref|YP_003424488.1|	-	5.1e-16	58.8	0.1	1.1e-15	57.8	0.1	1.6	1	0	0	1	1	1	1	Porphobilinogen	deaminase,	C-terminal	domain
GFO_IDH_MocA	PF01408.22	gi|288561003|ref|YP_003424489.1|	-	2.8e-32	112.0	1.4	5.2e-32	111.2	1.4	1.5	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
GFO_IDH_MocA_C	PF02894.17	gi|288561003|ref|YP_003424489.1|	-	3e-06	27.2	0.0	7e-06	26.0	0.0	1.7	1	1	0	1	1	1	1	Oxidoreductase	family,	C-terminal	alpha/beta	domain
NAD_binding_2	PF03446.15	gi|288561003|ref|YP_003424489.1|	-	1.1e-05	25.6	0.2	2.4e-05	24.6	0.2	1.6	1	1	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
CoA_binding	PF02629.19	gi|288561003|ref|YP_003424489.1|	-	0.00011	22.8	3.4	0.0034	18.0	0.5	2.6	2	0	0	2	2	2	1	CoA	binding	domain
NAD_binding_3	PF03447.16	gi|288561003|ref|YP_003424489.1|	-	0.00026	21.6	0.5	0.0005	20.7	0.5	1.4	1	0	0	1	1	1	1	Homoserine	dehydrogenase,	NAD	binding	domain
Cmyb_C	PF09316.10	gi|288561003|ref|YP_003424489.1|	-	0.0027	17.4	0.2	0.0047	16.6	0.2	1.4	1	0	0	1	1	1	1	C-myb,	C-terminal
CoA_binding_2	PF13380.6	gi|288561003|ref|YP_003424489.1|	-	0.017	15.6	0.1	0.039	14.5	0.1	1.6	1	0	0	1	1	1	0	CoA	binding	domain
2-Hacid_dh_C	PF02826.19	gi|288561003|ref|YP_003424489.1|	-	0.054	12.8	0.1	0.098	12.0	0.1	1.4	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Pribosyltran	PF00156.27	gi|288561004|ref|YP_003424490.1|	-	5.6e-17	61.7	1.2	1.4e-16	60.4	1.4	1.5	2	0	0	2	2	2	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.6	gi|288561004|ref|YP_003424490.1|	-	0.005	16.3	0.1	0.0074	15.8	0.1	1.4	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
PDZ_6	PF17820.1	gi|288561004|ref|YP_003424490.1|	-	0.0091	15.8	0.5	0.49	10.3	0.2	2.5	2	0	0	2	2	2	1	PDZ	domain
PRTase_2	PF15609.6	gi|288561004|ref|YP_003424490.1|	-	0.025	14.1	1.3	0.032	13.7	0.5	1.6	1	1	0	1	1	1	0	Phosphoribosyl	transferase
HTH_23	PF13384.6	gi|288561004|ref|YP_003424490.1|	-	0.042	13.6	0.0	0.083	12.7	0.0	1.5	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_7	PF02796.15	gi|288561004|ref|YP_003424490.1|	-	0.043	13.9	0.0	0.15	12.1	0.0	1.9	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	resolvase
HTH_11	PF08279.12	gi|288561004|ref|YP_003424490.1|	-	0.061	13.3	0.0	0.2	11.6	0.0	1.9	1	0	0	1	1	1	0	HTH	domain
Nucleo_LEF-12	PF06256.11	gi|288561004|ref|YP_003424490.1|	-	0.12	12.2	0.0	0.22	11.3	0.0	1.4	1	0	0	1	1	1	0	Nucleopolyhedrovirus	LEF-12	protein
GerE	PF00196.19	gi|288561004|ref|YP_003424490.1|	-	0.14	11.7	0.0	0.23	11.0	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
DUF169	PF02596.15	gi|288561005|ref|YP_003424491.1|	-	2.5e-35	122.3	0.0	2.8e-35	122.1	0.0	1.0	1	0	0	1	1	1	1	Uncharacterised	ArCR,	COG2043
NAPRTase	PF04095.16	gi|288561006|ref|YP_003424492.1|	-	3.9e-44	151.1	0.1	5e-44	150.7	0.1	1.1	1	0	0	1	1	1	1	Nicotinate	phosphoribosyltransferase	(NAPRTase)	family
DUF5598	PF18127.1	gi|288561006|ref|YP_003424492.1|	-	1.4e-40	137.7	0.3	5.3e-39	132.6	0.1	2.4	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF5598)
MatE	PF01554.18	gi|288561007|ref|YP_003424493.1|	-	1.8e-47	161.0	47.5	1.9e-30	105.6	10.9	2.6	3	0	0	3	3	3	2	MatE
Polysacc_synt_C	PF14667.6	gi|288561007|ref|YP_003424493.1|	-	6.9e-09	35.9	11.0	6.9e-09	35.9	11.0	4.9	2	2	1	4	4	4	2	Polysaccharide	biosynthesis	C-terminal	domain
Nab2	PF11517.8	gi|288561008|ref|YP_003424494.1|	-	0.028	14.7	0.1	0.039	14.2	0.1	1.2	1	0	0	1	1	1	0	Nuclear	abundant	poly(A)	RNA-bind	protein	2	(Nab2)
VERL	PF11386.8	gi|288561008|ref|YP_003424494.1|	-	0.05	13.8	0.0	0.11	12.6	0.0	1.8	1	1	0	1	1	1	0	Vitelline	envelope	receptor	for	lysin
DZR	PF12773.7	gi|288561011|ref|YP_003424497.1|	-	3.5e-18	65.4	31.7	7.1e-10	38.8	7.1	2.5	1	1	2	3	3	3	3	Double	zinc	ribbon
Peptidase_M48	PF01435.18	gi|288561011|ref|YP_003424497.1|	-	2.1e-17	63.5	0.0	3.8e-10	39.9	0.0	2.2	1	1	1	2	2	2	2	Peptidase	family	M48
zf-ribbon_3	PF13248.6	gi|288561011|ref|YP_003424497.1|	-	9.7e-17	59.8	22.5	1.6e-07	30.4	2.1	3.5	3	0	0	3	3	3	3	zinc-ribbon	domain
zinc_ribbon_2	PF13240.6	gi|288561011|ref|YP_003424497.1|	-	1.5e-16	59.5	26.5	8.1e-06	25.4	4.9	4.0	3	1	0	3	3	3	3	zinc-ribbon	domain
zinc_ribbon_15	PF17032.5	gi|288561011|ref|YP_003424497.1|	-	2.2e-07	31.5	18.6	0.011	16.5	1.1	4.1	4	0	0	4	4	4	3	zinc-ribbon	family
Peptidase_U49	PF10463.9	gi|288561011|ref|YP_003424497.1|	-	0.028	14.2	0.1	0.028	14.2	0.1	2.6	2	1	0	2	2	2	0	Peptidase	U49
SprT-like	PF10263.9	gi|288561011|ref|YP_003424497.1|	-	0.044	13.6	0.2	0.12	12.2	0.2	1.6	1	0	0	1	1	1	0	SprT-like	family
Peptidase_M78	PF06114.13	gi|288561011|ref|YP_003424497.1|	-	0.067	13.1	0.0	0.15	12.0	0.0	1.6	1	0	0	1	1	1	0	IrrE	N-terminal-like	domain
DUF45	PF01863.17	gi|288561011|ref|YP_003424497.1|	-	0.23	11.4	3.6	1.1	9.2	0.2	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF45
zf-CHY	PF05495.12	gi|288561011|ref|YP_003424497.1|	-	0.26	11.8	15.1	0.47	11.0	3.9	2.7	1	1	1	2	2	2	0	CHY	zinc	finger
zinc-ribbons_6	PF07191.12	gi|288561011|ref|YP_003424497.1|	-	0.38	10.8	13.5	2.4	8.2	7.1	2.6	1	1	1	2	2	2	0	zinc-ribbons
DNA_RNApol_7kD	PF03604.13	gi|288561011|ref|YP_003424497.1|	-	0.44	10.3	22.6	4.1	7.2	2.8	5.1	3	2	2	5	5	5	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
DUF2116	PF09889.9	gi|288561011|ref|YP_003424497.1|	-	0.55	10.3	13.3	6	6.9	1.0	3.4	1	1	2	3	3	3	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
Nudix_N_2	PF14803.6	gi|288561011|ref|YP_003424497.1|	-	0.75	9.8	18.5	24	5.0	0.1	5.8	5	1	0	5	5	5	0	Nudix	N-terminal
OrfB_Zn_ribbon	PF07282.11	gi|288561011|ref|YP_003424497.1|	-	0.88	9.5	20.0	4.2	7.4	0.7	4.2	1	1	2	3	3	3	0	Putative	transposase	DNA-binding	domain
DUF1258	PF06869.12	gi|288561011|ref|YP_003424497.1|	-	0.91	9.0	10.4	4.8	6.6	3.0	2.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1258)
Prok-RING_1	PF14446.6	gi|288561011|ref|YP_003424497.1|	-	1.2	9.1	21.5	5.4	7.0	1.6	3.6	2	1	1	3	3	3	0	Prokaryotic	RING	finger	family	1
TF_Zn_Ribbon	PF08271.12	gi|288561011|ref|YP_003424497.1|	-	1.3	8.6	28.9	1.5	8.4	9.7	4.9	1	1	3	4	4	4	0	TFIIB	zinc-binding
zf-HIT	PF04438.16	gi|288561011|ref|YP_003424497.1|	-	2	8.3	21.0	1	9.3	0.4	4.4	4	1	0	4	4	4	0	HIT	zinc	finger
DUF2318	PF10080.9	gi|288561011|ref|YP_003424497.1|	-	3.4	7.8	16.5	0.34	11.1	3.5	3.4	1	1	2	3	3	3	0	Predicted	membrane	protein	(DUF2318)
Ribosomal_L32p	PF01783.23	gi|288561011|ref|YP_003424497.1|	-	6.3	7.1	14.5	4	7.8	0.1	3.7	1	1	3	4	4	4	0	Ribosomal	L32p	protein	family
HypA	PF01155.19	gi|288561011|ref|YP_003424497.1|	-	6.3	6.9	15.8	13	5.8	5.0	3.2	1	1	2	3	3	3	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zinc-ribbon_6	PF10005.9	gi|288561011|ref|YP_003424497.1|	-	8.4	7.2	15.7	3.9	8.2	0.8	4.3	3	1	1	4	4	4	0	zinc-ribbon	domain
4HBT	PF03061.22	gi|288561012|ref|YP_003424498.1|	-	1.7e-08	34.7	0.0	3.2e-08	33.8	0.0	1.5	2	0	0	2	2	2	1	Thioesterase	superfamily
DUF4442	PF14539.6	gi|288561012|ref|YP_003424498.1|	-	4.5e-07	30.1	0.0	6.5e-07	29.5	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4442)
4HBT_3	PF13622.6	gi|288561012|ref|YP_003424498.1|	-	0.042	14.1	0.0	0.052	13.8	0.0	1.1	1	0	0	1	1	1	0	Thioesterase-like	superfamily
PS-DH	PF14765.6	gi|288561012|ref|YP_003424498.1|	-	0.047	12.9	0.0	0.058	12.6	0.0	1.2	1	0	0	1	1	1	0	Polyketide	synthase	dehydratase
Oxidored_FMN	PF00724.20	gi|288561013|ref|YP_003424499.1|	-	1.6e-32	113.1	0.0	5.5e-28	98.2	0.1	2.0	1	1	1	2	2	2	2	NADH:flavin	oxidoreductase	/	NADH	oxidase	family
Dus	PF01207.17	gi|288561013|ref|YP_003424499.1|	-	0.00027	20.1	0.0	0.00081	18.6	0.1	1.8	2	1	0	2	2	2	1	Dihydrouridine	synthase	(Dus)
His_biosynth	PF00977.21	gi|288561013|ref|YP_003424499.1|	-	0.0028	17.1	0.0	0.0047	16.4	0.0	1.3	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
Hexapep	PF00132.24	gi|288561014|ref|YP_003424500.1|	-	9e-17	60.1	7.1	4e-10	39.0	2.1	3.3	3	0	0	3	3	3	3	Bacterial	transferase	hexapeptide	(six	repeats)
Hexapep_2	PF14602.6	gi|288561014|ref|YP_003424500.1|	-	1.8e-11	43.6	11.9	7.6e-09	35.2	1.0	3.0	3	1	0	3	3	3	2	Hexapeptide	repeat	of	succinyl-transferase
Na_Ala_symp	PF01235.17	gi|288561015|ref|YP_003424501.1|	-	1.1e-143	479.3	18.6	1.5e-143	478.9	18.6	1.1	1	0	0	1	1	1	1	Sodium:alanine	symporter	family
YrhC	PF14143.6	gi|288561015|ref|YP_003424501.1|	-	0.043	13.9	0.1	0.043	13.9	0.1	3.0	4	0	0	4	4	4	0	YrhC-like	protein
CBFD_NFYB_HMF	PF00808.23	gi|288561016|ref|YP_003424502.1|	-	6.8e-15	55.1	2.8	1.3e-14	54.3	2.8	1.5	1	0	0	1	1	1	1	Histone-like	transcription	factor	(CBF/NF-Y)	and	archaeal	histone
Histone	PF00125.24	gi|288561016|ref|YP_003424502.1|	-	1.4e-08	35.2	0.4	1.9e-08	34.8	0.4	1.2	1	0	0	1	1	1	1	Core	histone	H2A/H2B/H3/H4
CENP-S	PF15630.6	gi|288561016|ref|YP_003424502.1|	-	0.00014	22.2	0.1	0.00025	21.4	0.1	1.4	2	0	0	2	2	2	1	CENP-S	protein
TFIID-31kDa	PF02291.15	gi|288561016|ref|YP_003424502.1|	-	0.00018	21.6	0.1	0.00023	21.2	0.1	1.1	1	0	0	1	1	1	1	Transcription	initiation	factor	IID,	31kD	subunit
TAF	PF02969.17	gi|288561016|ref|YP_003424502.1|	-	0.0009	19.4	1.0	0.0016	18.5	1.0	1.4	1	0	0	1	1	1	1	TATA	box	binding	protein	associated	factor	(TAF)
CENP-T_C	PF15511.6	gi|288561016|ref|YP_003424502.1|	-	0.0013	18.9	0.1	0.0015	18.6	0.1	1.2	1	0	0	1	1	1	1	Centromere	kinetochore	component	CENP-T	histone	fold
Bromo_TP	PF07524.13	gi|288561016|ref|YP_003424502.1|	-	0.0071	16.3	0.0	0.013	15.5	0.0	1.4	1	0	0	1	1	1	1	Bromodomain	associated
DUF1931	PF09123.11	gi|288561016|ref|YP_003424502.1|	-	0.077	13.1	4.9	0.17	12.0	1.1	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF1931)
ELFV_dehydrog	PF00208.21	gi|288561017|ref|YP_003424503.1|	-	1.5e-88	296.7	2.3	2e-88	296.2	2.3	1.2	1	0	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
ELFV_dehydrog_N	PF02812.18	gi|288561017|ref|YP_003424503.1|	-	1.1e-51	174.1	0.0	2e-51	173.2	0.0	1.4	1	0	0	1	1	1	1	Glu/Leu/Phe/Val	dehydrogenase,	dimerisation	domain
TrmB	PF01978.19	gi|288561018|ref|YP_003424504.1|	-	2e-06	27.6	0.5	6.6e-06	25.9	0.2	2.0	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_45	PF14947.6	gi|288561018|ref|YP_003424504.1|	-	2.8e-05	24.0	2.9	9.3e-05	22.3	2.9	1.8	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_5	PF01022.20	gi|288561018|ref|YP_003424504.1|	-	3e-05	23.8	0.0	5.5e-05	22.9	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.6	gi|288561018|ref|YP_003424504.1|	-	0.00034	20.1	0.2	0.0015	18.1	0.2	2.1	2	1	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.12	gi|288561018|ref|YP_003424504.1|	-	0.0011	18.9	0.1	0.0028	17.6	0.1	1.6	1	0	0	1	1	1	1	HTH	domain
Spiralin	PF05215.13	gi|288561018|ref|YP_003424504.1|	-	0.0029	17.0	0.2	0.0036	16.7	0.2	1.1	1	0	0	1	1	1	1	Spiralin
HTH_IclR	PF09339.10	gi|288561018|ref|YP_003424504.1|	-	0.017	14.9	0.0	0.029	14.2	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
MarR	PF01047.22	gi|288561018|ref|YP_003424504.1|	-	0.048	13.6	1.1	0.12	12.3	0.2	2.1	2	0	0	2	2	2	0	MarR	family
HTH_20	PF12840.7	gi|288561018|ref|YP_003424504.1|	-	0.058	13.5	0.0	0.084	12.9	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
CENP-B_dimeris	PF09026.10	gi|288561019|ref|YP_003424505.1|	-	0.086	13.2	0.0	0.089	13.2	0.0	1.1	1	0	0	1	1	1	0	Centromere	protein	B	dimerisation	domain
TP_methylase	PF00590.20	gi|288561020|ref|YP_003424506.1|	-	3.9e-21	76.0	0.0	4.7e-21	75.7	0.0	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
MatE	PF01554.18	gi|288561021|ref|YP_003424507.1|	-	1.3e-47	161.5	40.1	2.6e-29	101.9	11.8	2.5	3	0	0	3	3	3	2	MatE
Polysacc_synt_C	PF14667.6	gi|288561021|ref|YP_003424507.1|	-	5.6e-09	36.2	16.0	5.6e-09	36.2	16.0	5.0	2	2	2	5	5	5	1	Polysaccharide	biosynthesis	C-terminal	domain
PsbH	PF00737.20	gi|288561021|ref|YP_003424507.1|	-	3.4	7.5	9.5	2.4	8.0	0.9	3.6	2	0	0	2	2	2	0	Photosystem	II	10	kDa	phosphoprotein
DDE_Tnp_1_6	PF13751.6	gi|288561022|ref|YP_003424508.1|	-	2.7e-25	89.0	0.0	5e-25	88.1	0.0	1.5	1	0	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1	PF01609.21	gi|288561022|ref|YP_003424508.1|	-	6.3e-11	42.3	0.1	1.7e-10	41.0	0.1	1.7	1	1	0	1	1	1	1	Transposase	DDE	domain
DUF772	PF05598.11	gi|288561022|ref|YP_003424508.1|	-	8.6e-05	22.5	0.0	0.00025	21.0	0.0	1.8	1	0	0	1	1	1	1	Transposase	domain	(DUF772)
TadF	PF16964.5	gi|288561022|ref|YP_003424508.1|	-	0.0058	16.4	0.1	0.012	15.4	0.1	1.5	1	0	0	1	1	1	1	Putative	tight	adherence	pilin	protein	F
Met_10	PF02475.16	gi|288561023|ref|YP_003424509.1|	-	7.1e-66	221.7	0.2	1.3e-65	220.9	0.2	1.4	1	0	0	1	1	1	1	Met-10+	like-protein
Trm5_N	PF18093.1	gi|288561023|ref|YP_003424509.1|	-	2.2e-14	53.0	0.8	7.9e-14	51.3	0.8	2.0	1	0	0	1	1	1	1	tRNA	methyltransferase	5	N-terminal	domain
MTS	PF05175.14	gi|288561023|ref|YP_003424509.1|	-	1e-07	31.7	0.0	2.6e-07	30.4	0.0	1.7	1	0	0	1	1	1	1	Methyltransferase	small	domain
PrmA	PF06325.13	gi|288561023|ref|YP_003424509.1|	-	5.8e-07	29.2	0.6	1.7e-06	27.6	0.0	1.8	2	0	0	2	2	2	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
TRM	PF02005.16	gi|288561023|ref|YP_003424509.1|	-	8.8e-06	25.1	1.4	9.8e-06	25.0	0.1	1.7	1	1	0	1	1	1	1	N2,N2-dimethylguanosine	tRNA	methyltransferase
Methyltransf_25	PF13649.6	gi|288561023|ref|YP_003424509.1|	-	9.8e-06	26.2	0.0	3.6e-05	24.4	0.0	2.0	2	1	0	2	2	2	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|288561023|ref|YP_003424509.1|	-	1.2e-05	25.1	0.4	0.00015	21.6	0.1	2.3	2	1	0	2	2	2	1	Methyltransferase	domain
Methyltr_RsmB-F	PF01189.17	gi|288561023|ref|YP_003424509.1|	-	4.4e-05	23.2	0.1	0.00015	21.5	0.0	1.8	1	1	1	2	2	2	1	16S	rRNA	methyltransferase	RsmB/F
Methyltransf_16	PF10294.9	gi|288561023|ref|YP_003424509.1|	-	0.00041	20.1	0.0	0.00083	19.1	0.0	1.5	1	0	0	1	1	1	1	Lysine	methyltransferase
DNA_methylase	PF00145.17	gi|288561023|ref|YP_003424509.1|	-	0.00054	19.4	2.3	0.0012	18.3	0.1	2.1	2	0	0	2	2	2	1	C-5	cytosine-specific	DNA	methylase
Cons_hypoth95	PF03602.15	gi|288561023|ref|YP_003424509.1|	-	0.00074	19.2	0.0	0.0021	17.7	0.0	1.9	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltransf_23	PF13489.6	gi|288561023|ref|YP_003424509.1|	-	0.0021	17.9	0.1	0.025	14.4	0.0	2.3	2	1	0	2	2	2	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|288561023|ref|YP_003424509.1|	-	0.0026	18.5	0.2	0.22	12.3	0.0	3.1	2	1	1	3	3	3	1	Methyltransferase	domain
Methyltrans_SAM	PF10672.9	gi|288561023|ref|YP_003424509.1|	-	0.028	13.6	0.0	0.042	13.0	0.0	1.4	1	0	0	1	1	1	0	S-adenosylmethionine-dependent	methyltransferase
Methyltransf_11	PF08241.12	gi|288561023|ref|YP_003424509.1|	-	0.057	14.1	0.0	0.22	12.2	0.0	2.1	2	1	0	2	2	2	0	Methyltransferase	domain
IF-2B	PF01008.17	gi|288561024|ref|YP_003424510.1|	-	5.6e-76	255.4	0.0	8.3e-76	254.9	0.0	1.3	1	0	0	1	1	1	1	Initiation	factor	2	subunit	family
Radical_SAM	PF04055.21	gi|288561025|ref|YP_003424511.1|	-	3.5e-26	92.6	0.0	5.5e-26	91.9	0.0	1.3	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|288561025|ref|YP_003424511.1|	-	0.013	15.7	0.0	0.023	15.0	0.0	1.4	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
CoA_binding_2	PF13380.6	gi|288561025|ref|YP_003424511.1|	-	0.028	14.9	0.1	2.9	8.4	0.0	2.3	1	1	0	2	2	2	0	CoA	binding	domain
DUF2113	PF09886.9	gi|288561026|ref|YP_003424512.1|	-	6.4e-67	224.5	2.6	7.2e-67	224.3	2.6	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2113)
BcrAD_BadFG	PF01869.20	gi|288561027|ref|YP_003424513.1|	-	2e-57	194.8	4.7	2.7e-57	194.3	4.7	1.2	1	0	0	1	1	1	1	BadF/BadG/BcrA/BcrD	ATPase	family
FtsA	PF14450.6	gi|288561027|ref|YP_003424513.1|	-	0.0038	17.6	1.0	3.2	8.2	0.1	2.8	2	1	0	2	2	2	2	Cell	division	protein	FtsA
MutL	PF13941.6	gi|288561027|ref|YP_003424513.1|	-	0.21	10.2	3.3	0.92	8.0	0.7	2.3	2	0	0	2	2	2	0	MutL	protein
Hydantoinase_A	PF01968.18	gi|288561027|ref|YP_003424513.1|	-	1.2	8.3	7.8	5.9	6.1	0.2	2.9	3	0	0	3	3	3	0	Hydantoinase/oxoprolinase
DUF2112	PF09885.9	gi|288561028|ref|YP_003424514.1|	-	8.6e-63	210.6	0.0	1e-62	210.4	0.0	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2112)
DUF2102	PF09875.9	gi|288561029|ref|YP_003424515.1|	-	1.1e-41	140.8	0.0	1.3e-41	140.4	0.0	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2102)
PI3K_p85B	PF02192.16	gi|288561030|ref|YP_003424516.1|	-	0.029	14.1	0.0	0.07	12.9	0.0	1.6	1	0	0	1	1	1	0	PI3-kinase	family,	p85-binding	domain
ABC_tran	PF00005.27	gi|288561031|ref|YP_003424517.1|	-	7.4e-33	114.0	0.0	1.8e-32	112.7	0.0	1.6	1	1	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|288561031|ref|YP_003424517.1|	-	1.8e-12	47.7	0.3	1.2e-05	25.2	0.0	2.1	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|288561031|ref|YP_003424517.1|	-	9.7e-08	31.7	0.9	0.00023	20.7	0.9	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.6	gi|288561031|ref|YP_003424517.1|	-	1.1e-05	26.1	0.0	1.3e-05	25.8	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.6	gi|288561031|ref|YP_003424517.1|	-	4.9e-05	23.8	0.0	7.2e-05	23.2	0.0	1.3	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.6	gi|288561031|ref|YP_003424517.1|	-	9.4e-05	22.7	0.0	0.00014	22.1	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_29	PF13555.6	gi|288561031|ref|YP_003424517.1|	-	9.7e-05	22.0	0.1	0.00018	21.2	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_13	PF13166.6	gi|288561031|ref|YP_003424517.1|	-	0.00022	20.0	0.1	0.051	12.2	0.0	2.1	2	0	0	2	2	2	2	AAA	domain
AAA_15	PF13175.6	gi|288561031|ref|YP_003424517.1|	-	0.00045	20.0	0.4	0.6	9.7	0.2	2.1	1	1	1	2	2	2	2	AAA	ATPase	domain
RsgA_GTPase	PF03193.16	gi|288561031|ref|YP_003424517.1|	-	0.00062	19.7	0.1	0.0011	18.9	0.1	1.4	1	0	0	1	1	1	1	RsgA	GTPase
NB-ARC	PF00931.22	gi|288561031|ref|YP_003424517.1|	-	0.00077	18.7	0.0	0.00096	18.4	0.0	1.3	1	1	0	1	1	1	1	NB-ARC	domain
ABC_ATPase	PF09818.9	gi|288561031|ref|YP_003424517.1|	-	0.0034	16.2	0.2	1	8.1	0.0	2.8	3	0	0	3	3	3	1	Predicted	ATPase	of	the	ABC	class
AAA_14	PF13173.6	gi|288561031|ref|YP_003424517.1|	-	0.02	14.9	0.0	0.12	12.4	0.0	2.3	1	1	1	2	2	2	0	AAA	domain
NACHT	PF05729.12	gi|288561031|ref|YP_003424517.1|	-	0.024	14.5	0.0	0.035	14.0	0.0	1.3	1	0	0	1	1	1	0	NACHT	domain
IstB_IS21	PF01695.17	gi|288561031|ref|YP_003424517.1|	-	0.031	14.0	0.0	0.5	10.1	0.0	2.3	1	1	1	2	2	2	0	IstB-like	ATP	binding	protein
AAA	PF00004.29	gi|288561031|ref|YP_003424517.1|	-	0.036	14.5	0.9	0.48	10.9	0.2	2.7	1	1	1	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ATPase_2	PF01637.18	gi|288561031|ref|YP_003424517.1|	-	0.036	14.0	0.1	0.075	12.9	0.0	1.6	2	1	0	2	2	2	0	ATPase	domain	predominantly	from	Archaea
AAA_30	PF13604.6	gi|288561031|ref|YP_003424517.1|	-	0.038	13.7	0.0	0.086	12.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Resolvase	PF00239.21	gi|288561031|ref|YP_003424517.1|	-	0.04	14.0	0.0	0.069	13.3	0.0	1.3	1	0	0	1	1	1	0	Resolvase,	N	terminal	domain
MMR_HSR1	PF01926.23	gi|288561031|ref|YP_003424517.1|	-	0.081	13.0	0.0	0.25	11.4	0.0	1.8	2	0	0	2	2	2	0	50S	ribosome-binding	GTPase
AAA_33	PF13671.6	gi|288561031|ref|YP_003424517.1|	-	0.083	13.0	0.0	0.2	11.8	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_27	PF13514.6	gi|288561031|ref|YP_003424517.1|	-	0.089	12.4	0.0	0.15	11.6	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_28	PF13521.6	gi|288561031|ref|YP_003424517.1|	-	0.09	13.0	0.0	0.59	10.4	0.0	2.1	1	1	1	2	2	2	0	AAA	domain
SbcCD_C	PF13558.6	gi|288561031|ref|YP_003424517.1|	-	0.1	12.8	0.4	1.3	9.3	0.2	2.5	2	1	0	2	2	2	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_18	PF13238.6	gi|288561031|ref|YP_003424517.1|	-	0.1	13.1	0.1	0.4	11.2	0.1	2.0	1	1	0	1	1	1	0	AAA	domain
Rad17	PF03215.15	gi|288561031|ref|YP_003424517.1|	-	0.12	12.3	0.0	0.29	11.0	0.0	1.6	2	0	0	2	2	1	0	Rad17	P-loop	domain
Cytidylate_kin	PF02224.18	gi|288561031|ref|YP_003424517.1|	-	0.14	11.9	0.0	0.19	11.4	0.0	1.3	1	0	0	1	1	1	0	Cytidylate	kinase
BPD_transp_1	PF00528.22	gi|288561032|ref|YP_003424518.1|	-	4.5e-21	75.4	14.7	5.6e-21	75.1	14.7	1.1	1	0	0	1	1	1	1	Binding-protein-dependent	transport	system	inner	membrane	component
SBP_bac_3	PF00497.20	gi|288561033|ref|YP_003424519.1|	-	4.3e-53	180.0	2.1	5.2e-53	179.8	2.1	1.0	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	3
NMT1	PF09084.11	gi|288561033|ref|YP_003424519.1|	-	2.7e-05	24.2	1.6	5.1e-05	23.3	1.0	1.6	2	0	0	2	2	2	1	NMT1/THI5	like
Phosphonate-bd	PF12974.7	gi|288561033|ref|YP_003424519.1|	-	0.00023	20.8	0.3	0.00034	20.3	0.3	1.2	1	0	0	1	1	1	1	ABC	transporter,	phosphonate,	periplasmic	substrate-binding	protein
NMT1_3	PF16868.5	gi|288561033|ref|YP_003424519.1|	-	0.029	13.8	0.1	0.043	13.2	0.1	1.2	1	0	0	1	1	1	0	NMT1-like	family
GIDA	PF01134.22	gi|288561033|ref|YP_003424519.1|	-	0.058	12.5	0.2	0.074	12.1	0.2	1.2	1	0	0	1	1	1	0	Glucose	inhibited	division	protein	A
SurA_N_2	PF13623.6	gi|288561033|ref|YP_003424519.1|	-	3.7	7.4	5.6	16	5.3	0.3	2.3	2	0	0	2	2	2	0	SurA	N-terminal	domain
AIRS	PF00586.24	gi|288561034|ref|YP_003424520.1|	-	2.6e-18	66.4	0.6	6.8e-18	65.1	0.6	1.7	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
AIRS_C	PF02769.22	gi|288561034|ref|YP_003424520.1|	-	1.7e-13	51.0	0.0	2.7e-13	50.3	0.0	1.3	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
Mitofilin	PF09731.9	gi|288561035|ref|YP_003424521.1|	-	0.036	12.9	0.1	0.046	12.6	0.1	1.1	1	0	0	1	1	1	0	Mitochondrial	inner	membrane	protein
WSD	PF15613.6	gi|288561035|ref|YP_003424521.1|	-	1.4	9.4	3.1	23	5.6	3.1	2.9	1	1	0	1	1	1	0	Williams-Beuren	syndrome	DDT	(WSD),	D-TOX	E	motif
DUF2117	PF09890.9	gi|288561036|ref|YP_003424522.1|	-	1.7e-61	207.4	0.1	4.7e-61	205.9	0.1	1.8	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2117)
NAD_kinase	PF01513.21	gi|288561036|ref|YP_003424522.1|	-	0.0047	16.2	0.1	0.0095	15.2	0.0	1.5	2	0	0	2	2	2	1	ATP-NAD	kinase
His_Phos_2	PF00328.22	gi|288561036|ref|YP_003424522.1|	-	0.029	13.7	0.0	0.14	11.5	0.0	1.8	1	1	1	2	2	2	0	Histidine	phosphatase	superfamily	(branch	2)
PIN_6	PF17146.4	gi|288561037|ref|YP_003424523.1|	-	6.4e-10	39.4	0.1	9.3e-10	38.9	0.1	1.2	1	0	0	1	1	1	1	PIN	domain	of	ribonuclease
zf-C2H2	PF00096.26	gi|288561037|ref|YP_003424523.1|	-	2.5	8.7	3.7	13	6.5	0.2	2.3	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
MoCF_biosynth	PF00994.24	gi|288561038|ref|YP_003424524.1|	-	1.1e-34	119.2	0.1	1.2e-34	119.0	0.1	1.0	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
DHDPS	PF00701.22	gi|288561038|ref|YP_003424524.1|	-	0.13	11.0	0.1	0.19	10.4	0.1	1.2	1	0	0	1	1	1	0	Dihydrodipicolinate	synthetase	family
Pribosyltran	PF00156.27	gi|288561039|ref|YP_003424525.1|	-	2.3e-15	56.4	0.9	3.3e-15	56.0	0.9	1.1	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.6	gi|288561039|ref|YP_003424525.1|	-	0.0092	15.4	0.0	0.015	14.7	0.0	1.3	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
PDZ	PF00595.24	gi|288561039|ref|YP_003424525.1|	-	0.039	14.3	0.3	0.068	13.5	0.3	1.4	1	0	0	1	1	1	0	PDZ	domain
PRTase_2	PF15609.6	gi|288561039|ref|YP_003424525.1|	-	0.16	11.5	0.0	0.25	10.8	0.0	1.3	1	0	0	1	1	1	0	Phosphoribosyl	transferase
PRC	PF05239.16	gi|288561040|ref|YP_003424526.1|	-	5.6e-10	39.2	5.1	6.5e-10	38.9	5.1	1.1	1	0	0	1	1	1	1	PRC-barrel	domain
DUF2892	PF11127.8	gi|288561041|ref|YP_003424527.1|	-	0.038	14.0	0.1	0.038	14.0	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2892)
SSF	PF00474.17	gi|288561042|ref|YP_003424528.1|	-	3.1e-56	191.0	30.9	9.9e-56	189.3	30.9	1.8	1	1	0	1	1	1	1	Sodium:solute	symporter	family
DUF4229	PF14012.6	gi|288561042|ref|YP_003424528.1|	-	0.14	12.3	0.1	0.14	12.3	0.1	6.5	8	1	0	8	8	8	0	Protein	of	unknown	function	(DUF4229)
AcrZ	PF10766.9	gi|288561042|ref|YP_003424528.1|	-	0.18	11.4	4.9	1.9	8.1	0.0	3.6	2	0	0	2	2	2	0	Multidrug	efflux	pump-associated	protein	AcrZ
AMP-binding_C_2	PF14535.6	gi|288561043|ref|YP_003424529.1|	-	1.2e-33	115.3	0.5	7.7e-33	112.7	0.8	2.1	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
AMP-binding	PF00501.28	gi|288561043|ref|YP_003424529.1|	-	9.6e-12	44.2	3.1	7.6e-11	41.3	3.1	2.3	1	1	0	1	1	1	1	AMP-binding	enzyme
LuxE	PF04443.12	gi|288561043|ref|YP_003424529.1|	-	2.1e-06	27.0	0.0	0.0045	16.1	0.0	2.2	2	0	0	2	2	2	2	Acyl-protein	synthetase,	LuxE
PHR	PF08005.12	gi|288561043|ref|YP_003424529.1|	-	0.098	13.3	0.0	0.26	12.0	0.0	1.7	1	0	0	1	1	1	0	PHR	domain
ACT	PF01842.25	gi|288561044|ref|YP_003424530.1|	-	3.6e-08	33.0	0.1	0.0086	15.8	0.0	2.2	2	0	0	2	2	2	2	ACT	domain
ACT_4	PF13291.6	gi|288561044|ref|YP_003424530.1|	-	3.7e-05	24.2	0.9	0.11	13.1	0.1	2.4	1	1	0	2	2	2	2	ACT	domain
Nit_Regul_Hom	PF10126.9	gi|288561044|ref|YP_003424530.1|	-	0.11	12.6	3.1	2	8.5	1.0	2.9	1	1	1	2	2	2	0	Uncharacterized	protein,	homolog	of	nitrogen	regulatory	protein	PII
SDF	PF00375.18	gi|288561045|ref|YP_003424531.1|	-	7.4e-129	430.2	50.9	9e-129	429.9	50.9	1.0	1	0	0	1	1	1	1	Sodium:dicarboxylate	symporter	family
FeoB_C	PF07664.12	gi|288561045|ref|YP_003424531.1|	-	5.2	6.8	11.3	20	4.9	0.6	4.2	3	0	0	3	3	3	0	Ferrous	iron	transport	protein	B	C	terminus
UBA_2	PF08587.11	gi|288561046|ref|YP_003424532.1|	-	0.027	14.6	0.3	0.082	13.0	0.1	1.9	2	0	0	2	2	2	0	Ubiquitin	associated	domain	(UBA)
CPSase_L_D2	PF02786.17	gi|288561047|ref|YP_003424533.1|	-	1.4e-114	380.9	0.1	7e-75	251.1	0.0	2.2	2	0	0	2	2	2	2	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
CPSase_L_D3	PF02787.19	gi|288561047|ref|YP_003424533.1|	-	4.4e-40	136.8	0.8	9.2e-40	135.8	0.8	1.6	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
MGS	PF02142.22	gi|288561047|ref|YP_003424533.1|	-	8e-17	61.2	0.9	3.1e-16	59.3	0.1	2.6	3	0	0	3	3	2	1	MGS-like	domain
ATP-grasp	PF02222.22	gi|288561047|ref|YP_003424533.1|	-	2.1e-16	60.0	0.0	8.8e-09	35.2	0.0	2.7	3	0	0	3	3	3	2	ATP-grasp	domain
Dala_Dala_lig_C	PF07478.13	gi|288561047|ref|YP_003424533.1|	-	2.5e-16	59.9	0.2	4.4e-08	32.9	0.0	2.8	2	0	0	2	2	2	2	D-ala	D-ala	ligase	C-terminus
ATPgrasp_Ter	PF15632.6	gi|288561047|ref|YP_003424533.1|	-	1.2e-12	47.7	0.1	8.3e-05	22.3	0.0	3.0	2	1	0	2	2	2	2	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp_3	PF02655.14	gi|288561047|ref|YP_003424533.1|	-	7.2e-10	39.1	0.6	0.00081	19.5	0.2	2.4	2	0	0	2	2	2	2	ATP-grasp	domain
GARS_A	PF01071.19	gi|288561047|ref|YP_003424533.1|	-	1.1e-07	31.8	0.0	0.0081	15.9	0.0	2.4	2	0	0	2	2	2	2	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATP-grasp_5	PF13549.6	gi|288561047|ref|YP_003424533.1|	-	0.00026	20.5	0.0	0.11	11.9	0.0	2.8	2	0	0	2	2	2	2	ATP-grasp	domain
DUF4176	PF13780.6	gi|288561047|ref|YP_003424533.1|	-	0.013	15.6	0.0	11	6.2	0.0	2.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4176)
Peptidase_S66	PF02016.15	gi|288561047|ref|YP_003424533.1|	-	0.039	14.1	0.0	0.65	10.1	0.0	3.0	3	0	0	3	3	3	0	LD-carboxypeptidase	N-terminal	domain
CPSase_sm_chain	PF00988.22	gi|288561048|ref|YP_003424534.1|	-	2e-47	160.2	0.0	3.7e-47	159.3	0.0	1.4	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	small	chain,	CPSase	domain
GATase	PF00117.28	gi|288561048|ref|YP_003424534.1|	-	1.1e-42	145.9	0.0	1.5e-42	145.5	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.13	gi|288561048|ref|YP_003424534.1|	-	2.4e-05	24.2	0.0	0.00069	19.4	0.0	2.3	1	1	0	1	1	1	1	Peptidase	C26
CAML	PF14963.6	gi|288561049|ref|YP_003424535.1|	-	0.21	11.7	6.0	0.3	11.2	6.0	1.2	1	0	0	1	1	1	0	Calcium	signal-modulating	cyclophilin	ligand
DUF2809	PF10990.8	gi|288561050|ref|YP_003424536.1|	-	2.1	9.1	14.6	1.7	9.3	3.7	2.9	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2809)
DUF2070	PF09843.9	gi|288561050|ref|YP_003424536.1|	-	2.2	6.5	13.4	2.7	6.2	13.4	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
FACT-Spt16_Nlob	PF14826.6	gi|288561051|ref|YP_003424537.1|	-	0.011	15.5	0.0	0.013	15.3	0.0	1.1	1	0	0	1	1	1	0	FACT	complex	subunit	SPT16	N-terminal	lobe	domain
Orf78	PF06024.12	gi|288561051|ref|YP_003424537.1|	-	0.044	14.1	0.3	0.047	14.0	0.3	1.1	1	0	0	1	1	1	0	Orf78	(ac78)
zinc_ribbon_2	PF13240.6	gi|288561052|ref|YP_003424538.1|	-	6.3e-10	38.5	3.7	9.5e-10	37.9	3.7	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|288561052|ref|YP_003424538.1|	-	1.5e-07	30.6	1.8	2.3e-07	30.0	1.8	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-NADH-PPase	PF09297.11	gi|288561052|ref|YP_003424538.1|	-	2.2e-06	27.2	0.7	0.018	14.7	0.1	2.2	2	0	0	2	2	2	2	NADH	pyrophosphatase	zinc	ribbon	domain
Nudix_N_2	PF14803.6	gi|288561052|ref|YP_003424538.1|	-	2.4e-06	27.3	0.9	0.0083	16.0	0.0	2.2	2	0	0	2	2	2	2	Nudix	N-terminal
DZR	PF12773.7	gi|288561052|ref|YP_003424538.1|	-	3e-06	27.1	1.9	8.7e-06	25.7	1.9	1.6	1	1	0	1	1	1	1	Double	zinc	ribbon
NOB1_Zn_bind	PF08772.11	gi|288561052|ref|YP_003424538.1|	-	7.4e-06	26.0	2.6	0.013	15.7	0.0	2.1	1	1	1	2	2	2	2	Nin	one	binding	(NOB1)	Zn-ribbon	like
YhfH	PF14149.6	gi|288561052|ref|YP_003424538.1|	-	0.0049	16.8	1.8	0.19	11.8	0.2	2.2	2	0	0	2	2	2	1	YhfH-like	protein
zf-C4_Topoisom	PF01396.19	gi|288561052|ref|YP_003424538.1|	-	0.007	16.1	2.5	0.32	10.8	0.3	2.5	1	1	1	2	2	2	1	Topoisomerase	DNA	binding	C4	zinc	finger
GFA	PF04828.14	gi|288561052|ref|YP_003424538.1|	-	0.0076	16.6	1.9	0.76	10.2	0.1	2.2	1	1	1	2	2	2	2	Glutathione-dependent	formaldehyde-activating	enzyme
MqsA_antitoxin	PF15731.5	gi|288561052|ref|YP_003424538.1|	-	0.01	16.0	0.7	0.57	10.3	0.0	2.1	1	1	1	2	2	2	0	Antitoxin	component	of	bacterial	toxin-antitoxin	system,	MqsA
zf_UBZ	PF18439.1	gi|288561052|ref|YP_003424538.1|	-	0.022	14.3	4.5	1.3	8.7	0.1	2.7	1	1	1	2	2	2	0	Ubiquitin-Binding	Zinc	Finger
UPF0547	PF10571.9	gi|288561052|ref|YP_003424538.1|	-	0.023	14.8	3.9	1.5	8.9	0.3	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
DUF2321	PF10083.9	gi|288561052|ref|YP_003424538.1|	-	0.034	13.8	1.1	0.15	11.7	1.0	2.0	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2321)
zf-IS66	PF13005.7	gi|288561052|ref|YP_003424538.1|	-	0.087	13.2	3.2	2.8	8.4	0.2	2.3	1	1	1	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
RNA_POL_M_15KD	PF02150.16	gi|288561052|ref|YP_003424538.1|	-	0.14	12.1	7.5	10	6.1	0.9	2.3	1	1	1	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
zf-tcix	PF14952.6	gi|288561052|ref|YP_003424538.1|	-	0.18	11.5	4.3	6.6	6.4	0.2	2.4	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
TF_Zn_Ribbon	PF08271.12	gi|288561052|ref|YP_003424538.1|	-	0.19	11.2	3.9	1.4	8.5	3.9	2.3	1	1	0	1	1	1	0	TFIIB	zinc-binding
Zn-ribbon_8	PF09723.10	gi|288561052|ref|YP_003424538.1|	-	0.31	11.2	3.5	6.7	6.9	0.4	2.3	1	1	1	2	2	2	0	Zinc	ribbon	domain
Taxilin	PF09728.9	gi|288561053|ref|YP_003424539.1|	-	0.0065	15.7	2.3	0.0074	15.5	2.3	1.0	1	0	0	1	1	1	1	Myosin-like	coiled-coil	protein
TACC_C	PF05010.14	gi|288561053|ref|YP_003424539.1|	-	0.026	14.3	1.7	0.056	13.2	0.8	1.8	1	1	1	2	2	2	0	Transforming	acidic	coiled-coil-containing	protein	(TACC),	C-terminal
RE_BstXI	PF09552.10	gi|288561053|ref|YP_003424539.1|	-	0.094	11.9	0.0	0.11	11.7	0.0	1.1	1	0	0	1	1	1	0	BstXI	restriction	endonuclease
Succ_DH_flav_C	PF02910.20	gi|288561053|ref|YP_003424539.1|	-	0.16	12.0	1.2	5.4	7.0	0.2	2.1	1	1	1	2	2	2	0	Fumarate	reductase	flavoprotein	C-term
ABC_tran_CTD	PF16326.5	gi|288561053|ref|YP_003424539.1|	-	0.97	9.7	6.0	26	5.2	6.0	2.4	1	1	0	1	1	1	0	ABC	transporter	C-terminal	domain
PMBR	PF09373.10	gi|288561054|ref|YP_003424540.1|	-	6.3e-06	26.1	0.6	4.5e-05	23.4	0.0	2.9	3	0	0	3	3	3	1	Pseudomurein-binding	repeat
Protocadherin	PF08374.11	gi|288561054|ref|YP_003424540.1|	-	0.01	15.8	3.3	0.022	14.7	3.3	1.5	1	1	0	1	1	1	0	Protocadherin
TMEM154	PF15102.6	gi|288561054|ref|YP_003424540.1|	-	0.019	14.9	0.1	0.045	13.6	0.1	1.6	1	0	0	1	1	1	0	TMEM154	protein	family
DUF4834	PF16118.5	gi|288561054|ref|YP_003424540.1|	-	0.06	14.3	15.5	4.5	8.3	15.5	2.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4834)
FeoB_associated	PF12669.7	gi|288561054|ref|YP_003424540.1|	-	0.46	10.9	7.0	1	9.8	7.0	1.5	1	0	0	1	1	1	0	FeoB-associated	Cys-rich	membrane	protein
Miga	PF10265.9	gi|288561054|ref|YP_003424540.1|	-	6.7	5.6	7.4	0.94	8.4	3.2	1.6	2	0	0	2	2	2	0	Mitoguardin
PhosphMutase	PF10143.9	gi|288561055|ref|YP_003424541.1|	-	0.64	9.9	2.7	0.78	9.6	0.3	2.2	2	0	0	2	2	2	0	2,3-bisphosphoglycerate-independent	phosphoglycerate	mutase
Selenoprotein_S	PF06936.11	gi|288561055|ref|YP_003424541.1|	-	0.76	9.6	3.9	1.7	8.5	3.9	1.6	1	0	0	1	1	1	0	Selenoprotein	S	(SelS)
Rad50_zn_hook	PF04423.14	gi|288561055|ref|YP_003424541.1|	-	7.1	6.6	14.4	8.3	6.3	0.6	4.8	4	0	0	4	4	4	0	Rad50	zinc	hook	motif
Acetyltransf_1	PF00583.25	gi|288561056|ref|YP_003424542.1|	-	1.8e-20	73.3	0.0	2.3e-20	73.0	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.7	gi|288561056|ref|YP_003424542.1|	-	3.6e-15	56.0	0.0	4.2e-15	55.8	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.7	gi|288561056|ref|YP_003424542.1|	-	3.4e-14	53.0	0.0	4.7e-14	52.6	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.10	gi|288561056|ref|YP_003424542.1|	-	2.3e-07	30.7	0.0	3.2e-07	30.2	0.0	1.2	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_4	PF13420.7	gi|288561056|ref|YP_003424542.1|	-	7.6e-07	29.4	0.1	9.8e-07	29.0	0.1	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.6	gi|288561056|ref|YP_003424542.1|	-	2.3e-05	24.1	0.1	0.00015	21.5	0.0	1.9	1	1	1	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.7	gi|288561056|ref|YP_003424542.1|	-	0.00011	22.9	0.0	0.00019	22.1	0.0	1.5	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
GNAT_acetyltran	PF12746.7	gi|288561056|ref|YP_003424542.1|	-	0.00044	19.9	0.0	0.00054	19.6	0.0	1.1	1	0	0	1	1	1	1	GNAT	acetyltransferase
Acetyltransf_9	PF13527.7	gi|288561056|ref|YP_003424542.1|	-	0.0062	16.6	0.0	0.036	14.2	0.0	2.1	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.6	gi|288561056|ref|YP_003424542.1|	-	0.034	14.3	0.0	0.056	13.6	0.0	1.3	1	0	0	1	1	1	0	GCN5-related	N-acetyl-transferase
Acetyltransf_18	PF18014.1	gi|288561056|ref|YP_003424542.1|	-	0.044	13.6	0.0	0.065	13.1	0.0	1.4	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
Acetyltransf_15	PF17013.5	gi|288561056|ref|YP_003424542.1|	-	0.046	13.2	0.0	0.078	12.4	0.0	1.3	1	1	0	1	1	1	0	Putative	acetyl-transferase
UPF0146	PF03686.13	gi|288561057|ref|YP_003424543.1|	-	3.7e-37	127.1	0.2	4.2e-37	126.9	0.2	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0146)
E1-E2_ATPase	PF00122.20	gi|288561058|ref|YP_003424544.1|	-	1.1e-50	171.7	0.5	1.1e-50	171.7	0.5	3.5	4	1	0	4	4	4	1	E1-E2	ATPase
Cation_ATPase_C	PF00689.21	gi|288561058|ref|YP_003424544.1|	-	9.3e-46	155.8	5.0	9.3e-46	155.8	5.0	2.0	3	0	0	3	3	3	1	Cation	transporting	ATPase,	C-terminus
Hydrolase	PF00702.26	gi|288561058|ref|YP_003424544.1|	-	2.2e-21	77.1	0.0	1.2e-20	74.7	0.0	2.2	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Cation_ATPase	PF13246.6	gi|288561058|ref|YP_003424544.1|	-	1.5e-19	69.8	0.1	3.7e-19	68.6	0.1	1.7	1	0	0	1	1	1	1	Cation	transport	ATPase	(P-type)
Cation_ATPase_N	PF00690.26	gi|288561058|ref|YP_003424544.1|	-	7.2e-17	60.8	0.1	1.5e-16	59.8	0.1	1.6	1	0	0	1	1	1	1	Cation	transporter/ATPase,	N-terminus
Hydrolase_3	PF08282.12	gi|288561058|ref|YP_003424544.1|	-	2.1e-06	27.7	0.4	2.1e-06	27.7	0.4	3.9	3	1	0	4	4	4	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.7	gi|288561058|ref|YP_003424544.1|	-	0.00083	19.8	0.0	0.0016	18.9	0.0	1.5	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Terminase_3C	PF17288.2	gi|288561058|ref|YP_003424544.1|	-	0.014	15.8	0.6	0.039	14.3	0.6	1.8	1	0	0	1	1	1	0	Terminase	RNAseH	like	domain
Ribonuc_2-5A	PF06479.12	gi|288561058|ref|YP_003424544.1|	-	0.067	13.4	1.0	0.78	9.9	0.0	2.5	2	0	0	2	2	2	0	Ribonuclease	2-5A
DNA_pol_alpha_N	PF12254.8	gi|288561058|ref|YP_003424544.1|	-	1.3	9.1	7.9	14	5.8	0.3	3.6	3	0	0	3	3	3	0	DNA	polymerase	alpha	subunit	p180	N	terminal
MMPL	PF03176.15	gi|288561058|ref|YP_003424544.1|	-	4.1	6.2	8.6	0.1	11.5	0.1	2.3	2	0	0	2	2	2	0	MMPL	family
Ribosomal_S10	PF00338.22	gi|288561060|ref|YP_003424546.1|	-	4.9e-26	90.8	0.0	5.4e-26	90.7	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S10p/S20e
PriA_C	PF18074.1	gi|288561060|ref|YP_003424546.1|	-	0.007	17.2	0.0	0.014	16.2	0.0	1.5	2	0	0	2	2	2	1	Primosomal	protein	N	C-terminal	domain
GTP_EFTU	PF00009.27	gi|288561061|ref|YP_003424547.1|	-	8e-60	201.7	0.0	1.1e-59	201.3	0.0	1.1	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D3	PF03143.17	gi|288561061|ref|YP_003424547.1|	-	8.8e-36	122.6	0.0	2e-35	121.5	0.0	1.6	1	0	0	1	1	1	1	Elongation	factor	Tu	C-terminal	domain
GTP_EFTU_D2	PF03144.25	gi|288561061|ref|YP_003424547.1|	-	2.5e-15	56.6	0.6	5.1e-15	55.6	0.6	1.6	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.23	gi|288561061|ref|YP_003424547.1|	-	5.1e-07	29.8	0.1	2.1e-06	27.8	0.1	2.1	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
RsgA_GTPase	PF03193.16	gi|288561061|ref|YP_003424547.1|	-	0.00086	19.2	0.6	0.11	12.5	0.1	2.4	1	1	1	2	2	2	1	RsgA	GTPase
FeoB_N	PF02421.18	gi|288561061|ref|YP_003424547.1|	-	0.0014	18.2	0.6	0.015	14.8	0.2	2.6	2	1	0	2	2	2	1	Ferrous	iron	transport	protein	B
GTP_EFTU_D4	PF14578.6	gi|288561061|ref|YP_003424547.1|	-	0.0032	17.3	1.0	0.0077	16.1	1.0	1.6	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	4
PduV-EutP	PF10662.9	gi|288561061|ref|YP_003424547.1|	-	0.0088	15.8	0.2	0.11	12.2	0.1	2.1	2	0	0	2	2	2	1	Ethanolamine	utilisation	-	propanediol	utilisation
ATP_bind_1	PF03029.17	gi|288561061|ref|YP_003424547.1|	-	0.017	14.9	0.0	0.07	12.9	0.0	1.9	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
Dynamin_N	PF00350.23	gi|288561061|ref|YP_003424547.1|	-	0.021	14.9	0.1	5.3	7.1	0.0	2.3	1	1	1	2	2	2	0	Dynamin	family
Gtr1_RagA	PF04670.12	gi|288561061|ref|YP_003424547.1|	-	0.063	12.6	0.1	0.32	10.3	0.1	1.9	1	1	0	1	1	1	0	Gtr1/RagA	G	protein	conserved	region
Septin	PF00735.18	gi|288561061|ref|YP_003424547.1|	-	0.11	11.8	0.0	0.18	11.1	0.0	1.3	1	0	0	1	1	1	0	Septin
GTP_EFTU	PF00009.27	gi|288561062|ref|YP_003424548.1|	-	1.4e-65	220.5	0.2	2.4e-65	219.7	0.2	1.4	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
EFG_IV	PF03764.18	gi|288561062|ref|YP_003424548.1|	-	9.1e-26	90.0	0.1	2.6e-25	88.5	0.1	1.8	1	0	0	1	1	1	1	Elongation	factor	G,	domain	IV
EFG_C	PF00679.24	gi|288561062|ref|YP_003424548.1|	-	1.5e-24	85.8	0.2	7.6e-24	83.6	0.0	2.4	2	1	0	2	2	2	1	Elongation	factor	G	C-terminus
EFG_II	PF14492.6	gi|288561062|ref|YP_003424548.1|	-	3.1e-22	78.4	0.4	8.7e-22	77.0	0.4	1.8	1	0	0	1	1	1	1	Elongation	Factor	G,	domain	II
GTP_EFTU_D2	PF03144.25	gi|288561062|ref|YP_003424548.1|	-	1e-11	45.0	1.5	3e-11	43.5	1.5	1.9	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.23	gi|288561062|ref|YP_003424548.1|	-	0.0038	17.3	0.0	0.0091	16.1	0.0	1.7	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
Ribosomal_S7	PF00177.21	gi|288561063|ref|YP_003424549.1|	-	3.5e-42	143.6	3.5	4.2e-42	143.3	3.5	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S7p/S5e
Bestrophin	PF01062.21	gi|288561063|ref|YP_003424549.1|	-	0.025	14.0	0.1	0.032	13.6	0.1	1.2	1	0	0	1	1	1	0	Bestrophin,	RFP-TM,	chloride	channel
Ribosom_S12_S23	PF00164.25	gi|288561064|ref|YP_003424550.1|	-	4.2e-47	158.5	0.1	5.4e-47	158.1	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S12/S23
KH_2	PF07650.17	gi|288561065|ref|YP_003424551.1|	-	6.8e-16	57.9	7.7	2.7e-11	43.1	1.3	2.1	1	1	1	2	2	2	2	KH	domain
KH_5	PF13184.6	gi|288561065|ref|YP_003424551.1|	-	5.7e-12	45.5	3.3	5.8e-12	45.5	0.5	2.2	1	1	1	2	2	2	1	NusA-like	KH	domain
KH_4	PF13083.6	gi|288561065|ref|YP_003424551.1|	-	0.0054	16.6	0.7	2.6	8.0	0.1	2.2	2	0	0	2	2	2	2	KH	domain
Ribosomal_L7Ae	PF01248.26	gi|288561066|ref|YP_003424552.1|	-	1e-16	60.4	0.0	1.1e-16	60.3	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
DUF4279	PF14106.6	gi|288561067|ref|YP_003424553.1|	-	0.03	14.5	5.3	2.4	8.4	0.1	3.5	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4279)
CPW_WPC	PF09717.10	gi|288561067|ref|YP_003424553.1|	-	2.2	9.3	7.9	9.7	7.3	0.1	3.8	4	0	0	4	4	4	0	Plasmodium	falciparum	domain	of	unknown	function	(CPW_WPC)
TolA_bind_tri	PF16331.5	gi|288561067|ref|YP_003424553.1|	-	6.8	6.9	11.1	1.1	9.4	0.5	3.2	3	0	0	3	3	3	0	TolA	binding	protein	trimerisation
DUF3452	PF11934.8	gi|288561067|ref|YP_003424553.1|	-	8	6.0	14.1	7.2	6.2	3.5	2.6	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3452)
HSP70	PF00012.20	gi|288561068|ref|YP_003424554.1|	-	3.2e-114	382.3	4.4	2.4e-98	329.9	2.8	2.0	1	1	1	2	2	2	2	Hsp70	protein
MreB_Mbl	PF06723.13	gi|288561068|ref|YP_003424554.1|	-	3.1e-14	52.5	0.2	3.8e-13	49.0	0.2	2.2	1	1	0	1	1	1	1	MreB/Mbl	protein
FtsA	PF14450.6	gi|288561068|ref|YP_003424554.1|	-	8.8e-05	22.9	0.8	0.014	15.8	0.0	3.1	3	1	0	4	4	4	1	Cell	division	protein	FtsA
Ppx-GppA	PF02541.16	gi|288561068|ref|YP_003424554.1|	-	0.012	15.0	0.0	0.023	14.1	0.0	1.4	1	0	0	1	1	1	0	Ppx/GppA	phosphatase	family
BcrAD_BadFG	PF01869.20	gi|288561068|ref|YP_003424554.1|	-	0.049	13.1	0.0	6.8	6.1	0.0	2.3	2	0	0	2	2	2	0	BadF/BadG/BcrA/BcrD	ATPase	family
Hydantoinase_A	PF01968.18	gi|288561068|ref|YP_003424554.1|	-	0.18	11.1	0.9	0.76	9.0	0.2	2.2	2	0	0	2	2	2	0	Hydantoinase/oxoprolinase
CEP19	PF14933.6	gi|288561068|ref|YP_003424554.1|	-	4.1	7.7	6.9	1.1	9.6	1.7	2.2	2	0	0	2	2	2	0	CEP19-like	protein
TPR_2	PF07719.17	gi|288561069|ref|YP_003424555.1|	-	8.2e-07	28.7	7.7	0.0078	16.2	0.0	5.3	6	0	0	6	6	5	2	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|288561069|ref|YP_003424555.1|	-	3.2e-05	24.5	0.0	0.037	14.7	0.0	3.3	2	1	1	3	3	3	2	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|288561069|ref|YP_003424555.1|	-	4.3e-05	23.7	0.0	0.0022	18.2	0.0	2.7	1	1	1	2	2	2	2	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|288561069|ref|YP_003424555.1|	-	6e-05	22.9	2.6	0.067	13.4	0.0	5.2	5	0	0	5	5	4	1	Tetratricopeptide	repeat
TPR_11	PF13414.6	gi|288561069|ref|YP_003424555.1|	-	6.7e-05	22.5	3.2	0.033	13.9	0.0	3.9	3	1	1	4	4	4	1	TPR	repeat
TPR_7	PF13176.6	gi|288561069|ref|YP_003424555.1|	-	0.00024	20.9	0.0	8.7	6.6	0.0	4.1	4	0	0	4	4	4	1	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|288561069|ref|YP_003424555.1|	-	0.00096	18.9	14.7	0.052	13.4	0.0	5.8	6	0	0	6	6	6	2	Tetratricopeptide	repeat
PI31_Prot_N	PF11566.8	gi|288561069|ref|YP_003424555.1|	-	0.013	15.3	1.0	1.3	8.8	0.1	2.9	2	0	0	2	2	2	0	PI31	proteasome	regulator	N-terminal
TPR_6	PF13174.6	gi|288561069|ref|YP_003424555.1|	-	0.015	15.9	0.0	14	6.6	0.0	3.6	3	0	0	3	3	3	0	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|288561069|ref|YP_003424555.1|	-	0.025	15.1	0.1	0.43	11.1	0.0	2.4	1	1	0	1	1	1	0	Tetratricopeptide	repeat
CK2S	PF15011.6	gi|288561069|ref|YP_003424555.1|	-	0.1	12.5	3.1	2.7	7.9	1.5	2.8	2	0	0	2	2	2	0	Casein	Kinase	2	substrate
TPR_14	PF13428.6	gi|288561069|ref|YP_003424555.1|	-	0.14	13.0	0.0	9.9	7.3	0.0	3.0	3	0	0	3	3	3	0	Tetratricopeptide	repeat
SlyX	PF04102.12	gi|288561069|ref|YP_003424555.1|	-	0.3	11.7	1.5	1.2	9.8	1.5	2.1	1	0	0	1	1	1	0	SlyX
ATP-synt_S1	PF05827.12	gi|288561069|ref|YP_003424555.1|	-	0.38	10.6	2.5	1.1	9.0	2.0	2.1	1	1	0	1	1	1	0	Vacuolar	ATP	synthase	subunit	S1	(ATP6S1)
3HCDH_N	PF02737.18	gi|288561069|ref|YP_003424555.1|	-	0.63	9.9	4.8	1.6	8.6	4.8	1.6	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Exonuc_VII_L	PF02601.15	gi|288561069|ref|YP_003424555.1|	-	0.67	9.5	6.1	1.8	8.0	6.1	1.7	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
RNA_pol_Rpb1_5	PF04998.17	gi|288561070|ref|YP_003424556.1|	-	4.7e-56	190.2	2.3	7.5e-56	189.5	2.3	1.3	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	5
POTRA_2	PF08479.11	gi|288561070|ref|YP_003424556.1|	-	0.067	13.0	0.1	0.18	11.7	0.1	1.7	1	0	0	1	1	1	0	POTRA	domain,	ShlB-type
Flagellin_C	PF00700.21	gi|288561070|ref|YP_003424556.1|	-	0.15	12.4	0.4	0.5	10.8	0.4	1.9	1	0	0	1	1	1	0	Bacterial	flagellin	C-terminal	helical	region
RNA_pol_Rpb1_1	PF04997.12	gi|288561071|ref|YP_003424557.1|	-	3.5e-100	335.3	0.0	9.4e-100	333.9	0.0	1.7	2	0	0	2	2	2	1	RNA	polymerase	Rpb1,	domain	1
RNA_pol_Rpb1_2	PF00623.20	gi|288561071|ref|YP_003424557.1|	-	1.7e-70	236.5	0.2	2.9e-70	235.8	0.2	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	2
RNA_pol_Rpb1_3	PF04983.18	gi|288561071|ref|YP_003424557.1|	-	1.6e-30	106.1	0.0	4.9e-30	104.5	0.0	1.9	2	0	0	2	2	2	1	RNA	polymerase	Rpb1,	domain	3
RNA_pol_Rpb1_5	PF04998.17	gi|288561071|ref|YP_003424557.1|	-	5.6e-26	91.6	0.0	1.3e-25	90.4	0.0	1.6	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	5
RNA_pol_Rpb1_4	PF05000.17	gi|288561071|ref|YP_003424557.1|	-	2.1e-25	88.7	0.0	7.8e-25	86.9	0.0	2.0	2	0	0	2	2	2	1	RNA	polymerase	Rpb1,	domain	4
MqsA_antitoxin	PF15731.5	gi|288561071|ref|YP_003424557.1|	-	0.078	13.1	5.0	0.15	12.2	0.8	3.0	2	1	1	3	3	3	0	Antitoxin	component	of	bacterial	toxin-antitoxin	system,	MqsA
Rep_fac_C	PF08542.11	gi|288561071|ref|YP_003424557.1|	-	0.14	12.5	0.1	0.47	10.9	0.1	1.9	1	0	0	1	1	1	0	Replication	factor	C	C-terminal	domain
RNA_pol_Rpb2_6	PF00562.28	gi|288561072|ref|YP_003424558.1|	-	2.5e-134	448.2	0.0	3.8e-134	447.6	0.0	1.3	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	6
RNA_pol_Rpb2_7	PF04560.20	gi|288561072|ref|YP_003424558.1|	-	1.6e-30	105.3	0.1	2.8e-30	104.5	0.1	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	7
RNA_pol_Rpb2_4	PF04566.13	gi|288561072|ref|YP_003424558.1|	-	1.2e-20	73.5	0.1	2.7e-20	72.4	0.1	1.6	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	4
RNA_pol_Rpb2_5	PF04567.17	gi|288561072|ref|YP_003424558.1|	-	3.6e-10	40.2	2.0	1.4e-09	38.3	2.0	2.1	1	1	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	5
RNA_pol_Rpb2_45	PF10385.9	gi|288561072|ref|YP_003424558.1|	-	0.011	15.9	1.0	0.12	12.7	0.2	2.9	3	0	0	3	3	3	0	RNA	polymerase	beta	subunit	external	1	domain
Auto_anti-p27	PF06677.12	gi|288561072|ref|YP_003424558.1|	-	0.024	14.8	2.4	0.061	13.5	2.4	1.7	1	0	0	1	1	1	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zinc_ribbon_13	PF09855.9	gi|288561072|ref|YP_003424558.1|	-	0.12	12.5	0.9	0.44	10.8	0.9	1.9	1	1	0	1	1	1	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
RNA_pol_Rpb2_1	PF04563.15	gi|288561073|ref|YP_003424559.1|	-	1.1e-53	181.8	0.2	1.3e-53	181.6	0.2	1.1	1	0	0	1	1	1	1	RNA	polymerase	beta	subunit
RNA_pol_Rpb2_3	PF04565.16	gi|288561073|ref|YP_003424559.1|	-	8.7e-28	96.3	0.0	1.6e-27	95.4	0.0	1.5	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	3
RNA_pol_Rpb2_2	PF04561.14	gi|288561073|ref|YP_003424559.1|	-	2e-26	92.8	1.6	3.3e-26	92.1	1.6	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	2
RNA_pol_Rpb5_C	PF01191.19	gi|288561074|ref|YP_003424560.1|	-	1.1e-29	102.1	0.2	1.3e-29	101.9	0.2	1.0	1	0	0	1	1	1	1	RNA	polymerase	Rpb5,	C-terminal	domain
Fe_hyd_lg_C	PF02906.14	gi|288561074|ref|YP_003424560.1|	-	0.018	14.7	0.0	0.019	14.6	0.0	1.0	1	0	0	1	1	1	0	Iron	only	hydrogenase	large	subunit,	C-terminal	domain
HK	PF02110.15	gi|288561075|ref|YP_003424561.1|	-	8e-64	215.4	6.7	1.6e-63	214.4	6.7	1.4	1	1	0	1	1	1	1	Hydroxyethylthiazole	kinase	family
Phos_pyr_kin	PF08543.12	gi|288561075|ref|YP_003424561.1|	-	0.001	18.5	0.4	0.0033	16.8	0.3	1.7	1	1	0	1	1	1	1	Phosphomethylpyrimidine	kinase
Carb_kinase	PF01256.17	gi|288561075|ref|YP_003424561.1|	-	0.0061	16.1	1.0	0.028	13.9	1.0	2.0	1	1	0	1	1	1	1	Carbohydrate	kinase
TMP-TENI	PF02581.17	gi|288561076|ref|YP_003424562.1|	-	2.8e-66	222.3	2.3	3.3e-66	222.1	2.3	1.0	1	0	0	1	1	1	1	Thiamine	monophosphate	synthase
NMO	PF03060.15	gi|288561076|ref|YP_003424562.1|	-	0.00013	21.5	1.4	0.00019	20.9	1.4	1.2	1	0	0	1	1	1	1	Nitronate	monooxygenase
NanE	PF04131.14	gi|288561076|ref|YP_003424562.1|	-	0.0022	17.2	1.2	0.004	16.4	1.0	1.4	1	1	0	1	1	1	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
QRPTase_C	PF01729.19	gi|288561076|ref|YP_003424562.1|	-	0.0045	16.8	1.2	0.0075	16.1	1.2	1.4	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
IGPS	PF00218.21	gi|288561076|ref|YP_003424562.1|	-	0.027	13.6	0.1	0.052	12.7	0.1	1.4	1	0	0	1	1	1	0	Indole-3-glycerol	phosphate	synthase
Radical_SAM	PF04055.21	gi|288561076|ref|YP_003424562.1|	-	0.058	13.8	0.3	2.3	8.6	0.0	2.2	1	1	1	2	2	2	0	Radical	SAM	superfamily
Glutaredoxin	PF00462.24	gi|288561076|ref|YP_003424562.1|	-	0.059	13.6	0.3	0.46	10.7	0.0	2.5	3	0	0	3	3	3	0	Glutaredoxin
DUF643	PF04867.12	gi|288561076|ref|YP_003424562.1|	-	0.14	12.8	1.6	0.25	12.0	1.6	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF643)
PGK	PF00162.19	gi|288561077|ref|YP_003424563.1|	-	6.7e-111	370.9	0.3	7.6e-111	370.7	0.3	1.0	1	0	0	1	1	1	1	Phosphoglycerate	kinase
TIM	PF00121.18	gi|288561078|ref|YP_003424564.1|	-	1.1e-07	31.5	0.0	5e-07	29.3	0.0	1.8	1	1	1	2	2	2	1	Triosephosphate	isomerase
ThiG	PF05690.14	gi|288561078|ref|YP_003424564.1|	-	2.1e-05	23.9	0.6	5.3e-05	22.6	0.6	1.6	1	0	0	1	1	1	1	Thiazole	biosynthesis	protein	ThiG
FMN_dh	PF01070.18	gi|288561078|ref|YP_003424564.1|	-	6.1e-05	22.2	0.5	0.00018	20.7	0.6	1.6	2	0	0	2	2	2	1	FMN-dependent	dehydrogenase
NMO	PF03060.15	gi|288561078|ref|YP_003424564.1|	-	7e-05	22.4	1.5	0.00012	21.6	1.5	1.3	1	0	0	1	1	1	1	Nitronate	monooxygenase
Glu_synthase	PF01645.17	gi|288561078|ref|YP_003424564.1|	-	0.0023	17.1	0.5	0.0036	16.5	0.4	1.4	1	1	0	1	1	1	1	Conserved	region	in	glutamate	synthase
His_biosynth	PF00977.21	gi|288561078|ref|YP_003424564.1|	-	0.018	14.5	0.1	0.032	13.7	0.1	1.6	1	0	0	1	1	1	0	Histidine	biosynthesis	protein
IGPS	PF00218.21	gi|288561078|ref|YP_003424564.1|	-	0.1	11.7	0.1	0.2	10.8	0.1	1.4	1	0	0	1	1	1	0	Indole-3-glycerol	phosphate	synthase
Wyosine_form	PF08608.12	gi|288561079|ref|YP_003424565.1|	-	1.5e-19	70.1	0.4	3.3e-19	69.0	0.0	1.8	2	0	0	2	2	2	1	Wyosine	base	formation
Radical_SAM	PF04055.21	gi|288561079|ref|YP_003424565.1|	-	2.5e-16	60.5	0.2	1.4e-15	58.1	0.2	1.9	1	1	0	1	1	1	1	Radical	SAM	superfamily
ATP-grasp_2	PF08442.10	gi|288561080|ref|YP_003424566.1|	-	3.1e-61	206.5	0.5	3.1e-61	206.5	0.5	1.5	2	0	0	2	2	2	1	ATP-grasp	domain
Ligase_CoA	PF00549.19	gi|288561080|ref|YP_003424566.1|	-	2.8e-13	50.0	0.1	5.3e-13	49.1	0.1	1.4	1	0	0	1	1	1	1	CoA-ligase
ATP-grasp_5	PF13549.6	gi|288561080|ref|YP_003424566.1|	-	1.2e-11	44.5	2.8	3.1e-11	43.2	0.8	2.4	2	1	0	2	2	2	1	ATP-grasp	domain
GARS_A	PF01071.19	gi|288561080|ref|YP_003424566.1|	-	2.7e-06	27.3	0.3	4.8e-06	26.5	0.3	1.3	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
CPSase_L_D2	PF02786.17	gi|288561080|ref|YP_003424566.1|	-	0.00019	21.0	0.2	0.00035	20.1	0.2	1.4	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
TPR_2	PF07719.17	gi|288561081|ref|YP_003424567.1|	-	3.6e-12	45.4	5.6	0.00018	21.4	0.3	5.1	4	1	1	5	5	5	3	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|288561081|ref|YP_003424567.1|	-	7.2e-11	41.4	12.7	0.0062	16.3	1.2	5.3	5	0	0	5	5	5	4	Tetratricopeptide	repeat
Fis1_TPR_C	PF14853.6	gi|288561081|ref|YP_003424567.1|	-	1e-10	41.5	5.2	0.047	13.8	0.6	4.4	3	1	1	4	4	4	4	Fis1	C-terminal	tetratricopeptide	repeat
TPR_19	PF14559.6	gi|288561081|ref|YP_003424567.1|	-	9.4e-07	29.3	0.3	0.065	13.8	0.1	2.8	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|288561081|ref|YP_003424567.1|	-	2.1e-06	27.9	0.7	0.021	15.1	0.1	4.2	2	1	2	4	4	4	1	Tetratricopeptide	repeat
TPR_9	PF13371.6	gi|288561081|ref|YP_003424567.1|	-	0.00018	21.6	0.0	0.86	9.8	0.0	3.1	3	0	0	3	3	3	1	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|288561081|ref|YP_003424567.1|	-	0.00035	20.7	6.0	0.029	14.6	0.5	2.5	2	1	0	2	2	2	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_8	PF13181.6	gi|288561081|ref|YP_003424567.1|	-	0.00081	19.4	8.4	0.97	9.8	0.8	4.3	4	0	0	4	4	4	2	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|288561081|ref|YP_003424567.1|	-	0.0012	19.5	0.0	11	7.2	0.0	3.8	3	1	1	4	4	4	1	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|288561081|ref|YP_003424567.1|	-	0.03	15.0	0.0	8.3	7.2	0.0	2.5	2	1	0	2	2	2	0	Tetratricopeptide	repeat
TAF1D	PF15333.6	gi|288561081|ref|YP_003424567.1|	-	0.05	13.3	0.6	0.05	13.3	0.6	1.5	2	0	0	2	2	2	0	TATA	box-binding	protein-associated	factor	1D
CBM_X2	PF03442.14	gi|288561081|ref|YP_003424567.1|	-	0.06	13.5	0.2	0.11	12.6	0.2	1.4	1	0	0	1	1	1	0	Carbohydrate	binding	domain	X2
COPI_C	PF06957.11	gi|288561081|ref|YP_003424567.1|	-	0.13	11.0	0.7	5.7	5.6	0.1	2.4	2	1	1	3	3	3	0	Coatomer	(COPI)	alpha	subunit	C-terminus
TPR_17	PF13431.6	gi|288561081|ref|YP_003424567.1|	-	2.3	8.8	7.4	19	5.9	0.4	4.3	4	0	0	4	4	4	0	Tetratricopeptide	repeat
POR	PF01558.18	gi|288561082|ref|YP_003424568.1|	-	7.8e-36	123.8	1.3	9.1e-36	123.6	1.3	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
Glyco_transf_25	PF01755.17	gi|288561082|ref|YP_003424568.1|	-	0.13	12.1	0.0	0.15	11.9	0.0	1.1	1	0	0	1	1	1	0	Glycosyltransferase	family	25	(LPS	biosynthesis	protein)
TPP_enzyme_C	PF02775.21	gi|288561083|ref|YP_003424569.1|	-	8.1e-37	126.4	0.0	1.3e-36	125.7	0.0	1.4	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
DUF2752	PF10825.8	gi|288561083|ref|YP_003424569.1|	-	0.029	14.4	0.3	0.06	13.4	0.3	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2752)
POR_N	PF01855.19	gi|288561084|ref|YP_003424570.1|	-	1.4e-74	250.7	0.1	1.8e-74	250.4	0.1	1.1	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
PFOR_II	PF17147.4	gi|288561084|ref|YP_003424570.1|	-	1.4e-24	86.3	0.1	2.6e-24	85.5	0.1	1.4	1	0	0	1	1	1	1	Pyruvate:ferredoxin	oxidoreductase	core	domain	II
Transketolase_C	PF02780.20	gi|288561084|ref|YP_003424570.1|	-	2.7e-06	27.2	0.0	1.7e-05	24.7	0.0	2.0	1	1	1	2	2	2	1	Transketolase,	C-terminal	domain
Arg_tRNA_synt_N	PF03485.16	gi|288561084|ref|YP_003424570.1|	-	0.061	13.9	0.0	0.21	12.2	0.0	1.9	1	0	0	1	1	1	0	Arginyl	tRNA	synthetase	N	terminal	domain
TPP_enzyme_N	PF02776.18	gi|288561084|ref|YP_003424570.1|	-	0.071	12.7	0.0	0.12	12.0	0.0	1.4	1	0	0	1	1	1	0	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
APS_kinase	PF01583.20	gi|288561084|ref|YP_003424570.1|	-	0.19	11.6	0.0	0.33	10.8	0.0	1.3	1	0	0	1	1	1	0	Adenylylsulphate	kinase
Fer4	PF00037.27	gi|288561085|ref|YP_003424571.1|	-	2.8e-10	39.6	12.5	1.1e-05	25.0	1.8	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|288561085|ref|YP_003424571.1|	-	4.7e-09	36.7	19.0	4e-07	30.5	9.6	1.5	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|288561085|ref|YP_003424571.1|	-	7.5e-09	35.6	8.2	9.6e-09	35.3	8.2	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|288561085|ref|YP_003424571.1|	-	3.1e-08	33.3	12.7	0.00051	20.0	3.0	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|288561085|ref|YP_003424571.1|	-	9e-07	28.9	12.0	2.3e-05	24.4	12.9	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|288561085|ref|YP_003424571.1|	-	1.2e-06	29.4	9.6	0.003	18.4	1.6	2.1	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.6	gi|288561085|ref|YP_003424571.1|	-	4e-06	26.8	11.9	1.8e-05	24.8	11.9	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|288561085|ref|YP_003424571.1|	-	7.5e-06	26.1	12.4	0.012	16.0	3.4	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|288561085|ref|YP_003424571.1|	-	1.5e-05	24.8	10.8	0.0044	17.0	1.4	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|288561085|ref|YP_003424571.1|	-	5.3e-05	23.7	7.3	0.0097	16.4	0.7	2.2	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_22	PF17179.4	gi|288561085|ref|YP_003424571.1|	-	0.00091	20.0	5.4	0.44	11.4	0.2	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|288561085|ref|YP_003424571.1|	-	0.0031	18.0	13.0	0.11	13.0	13.0	2.1	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|288561085|ref|YP_003424571.1|	-	0.0044	17.4	12.1	0.22	12.0	12.3	2.1	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|288561085|ref|YP_003424571.1|	-	0.0056	17.5	14.9	0.055	14.4	3.6	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_15	PF13459.6	gi|288561085|ref|YP_003424571.1|	-	0.065	14.0	12.3	2.9	8.7	12.3	2.5	1	1	0	1	1	1	0	4Fe-4S	single	cluster	domain
ETF_QO	PF05187.13	gi|288561085|ref|YP_003424571.1|	-	0.85	9.8	6.4	2.5	8.3	6.4	1.7	1	1	0	1	1	1	0	Electron	transfer	flavoprotein-ubiquinone	oxidoreductase,	4Fe-4S
DHNA	PF04038.12	gi|288561087|ref|YP_003424573.1|	-	4.6e-42	142.9	0.0	5.3e-42	142.7	0.0	1.0	1	0	0	1	1	1	1	Dihydroneopterin	aldolase
Exog_C	PF18026.1	gi|288561087|ref|YP_003424573.1|	-	0.052	13.6	0.9	1.2	9.3	0.1	2.3	1	1	1	2	2	2	0	Endo/exonuclease	(EXOG)	C-terminal	domain
Sortase	PF04203.13	gi|288561088|ref|YP_003424574.1|	-	4.8e-16	58.7	0.0	6.4e-16	58.3	0.0	1.2	1	0	0	1	1	1	1	Sortase	domain
DUF981	PF06168.11	gi|288561088|ref|YP_003424574.1|	-	0.019	14.9	2.6	0.059	13.3	0.4	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF981)
7TMR-DISM_7TM	PF07695.11	gi|288561088|ref|YP_003424574.1|	-	0.029	14.3	1.0	0.029	14.3	1.0	2.1	2	0	0	2	2	2	0	7TM	diverse	intracellular	signalling
DUF4131	PF13567.6	gi|288561088|ref|YP_003424574.1|	-	0.75	9.4	2.7	1.2	8.8	1.7	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4131)
ATP_synt_H	PF05493.13	gi|288561088|ref|YP_003424574.1|	-	1.3	9.6	8.5	0.35	11.3	2.3	2.4	2	0	0	2	2	2	0	ATP	synthase	subunit	H
DUF202	PF02656.15	gi|288561088|ref|YP_003424574.1|	-	1.6	9.2	4.2	2.1	8.8	1.3	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF202)
DUF3112	PF11309.8	gi|288561088|ref|YP_003424574.1|	-	3.2	7.1	6.9	0.25	10.8	0.7	2.1	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3112)
Sigma_reg_N	PF13800.6	gi|288561088|ref|YP_003424574.1|	-	3.8	7.9	9.7	6.8	7.1	2.5	2.5	2	0	0	2	2	2	0	Sigma	factor	regulator	N-terminal
LRRC37AB_C	PF14914.6	gi|288561088|ref|YP_003424574.1|	-	5.1	7.0	5.5	1.2	9.1	0.4	2.0	2	0	0	2	2	2	0	LRRC37A/B	like	protein	1	C-terminal	domain
DUF515	PF04415.12	gi|288561089|ref|YP_003424575.1|	-	6.5e-10	38.0	14.2	3.1e-05	22.6	1.7	2.8	2	1	1	3	3	3	2	Protein	of	unknown	function	(DUF515)
CDP-OH_P_transf	PF01066.21	gi|288561090|ref|YP_003424576.1|	-	1.4e-09	38.5	2.8	1.4e-09	38.5	2.8	3.6	2	1	0	2	2	2	1	CDP-alcohol	phosphatidyltransferase
DUF4267	PF14087.6	gi|288561090|ref|YP_003424576.1|	-	0.79	9.8	5.9	0.49	10.5	1.4	2.4	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4267)
TMEM125	PF15109.6	gi|288561090|ref|YP_003424576.1|	-	1.4	9.3	6.1	1.7	9.0	1.3	2.7	2	1	0	2	2	2	0	TMEM125	protein	family
RR_TM4-6	PF06459.12	gi|288561091|ref|YP_003424577.1|	-	0.00049	20.0	22.8	0.00068	19.6	22.8	1.3	1	0	0	1	1	1	1	Ryanodine	Receptor	TM	4-6
SLC12	PF03522.15	gi|288561091|ref|YP_003424577.1|	-	0.022	13.8	13.5	0.031	13.3	13.5	1.2	1	0	0	1	1	1	0	Solute	carrier	family	12
DUF1682	PF07946.14	gi|288561091|ref|YP_003424577.1|	-	0.036	13.3	27.2	0.05	12.8	27.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1682)
RNA_pol_Rpc4	PF05132.14	gi|288561091|ref|YP_003424577.1|	-	0.045	14.2	11.7	0.07	13.6	11.7	1.4	1	0	0	1	1	1	0	RNA	polymerase	III	RPC4
CAF-1_p150	PF11600.8	gi|288561091|ref|YP_003424577.1|	-	0.18	11.5	53.3	0.036	13.8	49.7	1.7	2	0	0	2	2	2	0	Chromatin	assembly	factor	1	complex	p150	subunit,	N-terminal
CobT	PF06213.12	gi|288561091|ref|YP_003424577.1|	-	0.25	10.7	22.8	0.34	10.3	22.8	1.2	1	0	0	1	1	1	0	Cobalamin	biosynthesis	protein	CobT
DUF4746	PF15928.5	gi|288561091|ref|YP_003424577.1|	-	0.32	10.4	17.9	0.39	10.1	17.9	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4746)
Presenilin	PF01080.17	gi|288561091|ref|YP_003424577.1|	-	0.34	9.6	12.9	0.42	9.3	12.9	1.1	1	0	0	1	1	1	0	Presenilin
CDC45	PF02724.14	gi|288561091|ref|YP_003424577.1|	-	0.68	8.2	18.4	0.85	7.8	18.4	1.2	1	0	0	1	1	1	0	CDC45-like	protein
SID-1_RNA_chan	PF13965.6	gi|288561091|ref|YP_003424577.1|	-	1.2	7.5	2.9	1.3	7.3	2.9	1.1	1	0	0	1	1	1	0	dsRNA-gated	channel	SID-1
Hid1	PF12722.7	gi|288561091|ref|YP_003424577.1|	-	1.8	6.6	9.8	2	6.4	9.8	1.1	1	0	0	1	1	1	0	High-temperature-induced	dauer-formation	protein
Serinc	PF03348.15	gi|288561091|ref|YP_003424577.1|	-	2.7	6.8	4.5	3.3	6.5	4.5	1.2	1	0	0	1	1	1	0	Serine	incorporator	(Serinc)
Folate_carrier	PF01770.18	gi|288561091|ref|YP_003424577.1|	-	3.5	6.3	3.4	4.7	5.8	3.4	1.3	1	0	0	1	1	1	0	Reduced	folate	carrier
ALMT	PF11744.8	gi|288561091|ref|YP_003424577.1|	-	5.7	5.7	13.0	6.9	5.4	13.0	1.2	1	0	0	1	1	1	0	Aluminium	activated	malate	transporter
DUF2052	PF09747.9	gi|288561091|ref|YP_003424577.1|	-	6.6	6.8	27.0	11	6.1	27.0	1.4	1	0	0	1	1	1	0	Coiled-coil	domain	containing	protein	(DUF2052)
MreB_Mbl	PF06723.13	gi|288561092|ref|YP_003424578.1|	-	6.3e-96	321.0	15.5	7.7e-96	320.7	15.5	1.0	1	0	0	1	1	1	1	MreB/Mbl	protein
HSP70	PF00012.20	gi|288561092|ref|YP_003424578.1|	-	6.8e-13	47.7	5.6	2e-11	42.8	3.7	2.6	1	1	1	2	2	2	2	Hsp70	protein
Actin	PF00022.19	gi|288561092|ref|YP_003424578.1|	-	3.9e-10	38.9	0.0	2e-06	26.7	0.0	2.1	1	1	1	2	2	2	2	Actin
FtsA	PF14450.6	gi|288561092|ref|YP_003424578.1|	-	1.4e-09	38.3	0.7	1.4e-09	38.3	0.7	2.0	2	1	0	2	2	2	1	Cell	division	protein	FtsA
DDR	PF08841.10	gi|288561092|ref|YP_003424578.1|	-	0.0014	17.7	2.7	0.0019	17.3	2.7	1.3	1	0	0	1	1	1	1	Diol	dehydratase	reactivase	ATPase-like	domain
FeoA	PF04023.14	gi|288561092|ref|YP_003424578.1|	-	0.0062	16.8	2.0	0.019	15.2	0.5	2.6	3	0	0	3	3	3	1	FeoA	domain
VAPB_antitox	PF02697.14	gi|288561093|ref|YP_003424579.1|	-	6.7e-07	30.0	0.6	9.5e-07	29.5	0.6	1.2	1	0	0	1	1	1	1	Putative	antitoxin
RHH_5	PF07878.11	gi|288561093|ref|YP_003424579.1|	-	0.12	12.3	0.1	0.19	11.7	0.1	1.3	1	0	0	1	1	1	0	CopG-like	RHH_1	or	ribbon-helix-helix	domain,	RHH_5
RNase_HII	PF01351.18	gi|288561094|ref|YP_003424580.1|	-	1.2e-53	181.9	0.8	1.4e-53	181.7	0.8	1.0	1	0	0	1	1	1	1	Ribonuclease	HII
IMP_cyclohyd	PF07826.11	gi|288561095|ref|YP_003424581.1|	-	1.4e-68	230.2	0.2	1.7e-68	230.0	0.2	1.0	1	0	0	1	1	1	1	IMP	cyclohydrolase-like	protein
CBS	PF00571.28	gi|288561095|ref|YP_003424581.1|	-	0.065	13.7	0.1	0.11	12.9	0.1	1.5	1	0	0	1	1	1	0	CBS	domain
ExbD	PF02472.16	gi|288561096|ref|YP_003424582.1|	-	2.2e-06	27.9	1.0	2.5e-06	27.7	1.0	1.4	1	1	0	1	1	1	1	Biopolymer	transport	protein	ExbD/TolR
MotA_ExbB	PF01618.16	gi|288561097|ref|YP_003424583.1|	-	5.9e-29	100.4	1.9	5.9e-29	100.4	1.9	1.9	2	1	0	2	2	2	1	MotA/TolQ/ExbB	proton	channel	family
Cornichon	PF03311.14	gi|288561097|ref|YP_003424583.1|	-	0.0085	16.4	1.1	1.4	9.3	0.1	2.7	2	1	0	2	2	2	2	Cornichon	protein
F420_ligase	PF01996.16	gi|288561098|ref|YP_003424584.1|	-	6.7e-68	228.7	3.0	8.5e-68	228.3	3.0	1.0	1	0	0	1	1	1	1	F420-0:Gamma-glutamyl	ligase
Nucleoporin_C	PF03177.14	gi|288561098|ref|YP_003424584.1|	-	0.0045	15.8	0.1	0.0054	15.5	0.1	1.1	1	0	0	1	1	1	1	Non-repetitive/WGA-negative	nucleoporin	C-terminal
Zn-ribbon_8	PF09723.10	gi|288561099|ref|YP_003424585.1|	-	8.1e-06	25.9	6.1	0.0014	18.7	1.1	3.4	3	0	0	3	3	3	1	Zinc	ribbon	domain
zinc-ribbons_6	PF07191.12	gi|288561099|ref|YP_003424585.1|	-	0.00024	21.0	5.9	0.024	14.6	1.2	3.1	3	0	0	3	3	3	1	zinc-ribbons
zf-ribbon_3	PF13248.6	gi|288561099|ref|YP_003424585.1|	-	0.0017	17.7	15.3	0.2	11.1	0.3	4.0	4	0	0	4	4	4	2	zinc-ribbon	domain
CpXC	PF14353.6	gi|288561099|ref|YP_003424585.1|	-	0.0024	17.9	11.2	0.014	15.4	0.2	4.1	1	1	3	4	4	4	1	CpXC	protein
DZR	PF12773.7	gi|288561099|ref|YP_003424585.1|	-	0.0051	16.8	8.9	0.12	12.4	6.3	3.2	2	1	1	3	3	3	1	Double	zinc	ribbon
zf_UBZ	PF18439.1	gi|288561099|ref|YP_003424585.1|	-	0.019	14.6	11.3	4.6	6.9	0.4	4.3	4	0	0	4	4	4	0	Ubiquitin-Binding	Zinc	Finger
zf-LITAF-like	PF10601.9	gi|288561099|ref|YP_003424585.1|	-	0.025	14.8	9.6	0.29	11.4	0.0	4.1	3	1	0	4	4	4	0	LITAF-like	zinc	ribbon	domain
OrfB_Zn_ribbon	PF07282.11	gi|288561099|ref|YP_003424585.1|	-	0.065	13.2	5.4	0.07	13.1	0.5	2.9	3	0	0	3	3	3	0	Putative	transposase	DNA-binding	domain
Nudix_N_2	PF14803.6	gi|288561099|ref|YP_003424585.1|	-	0.083	12.8	8.3	2.5	8.1	0.1	3.9	4	0	0	4	4	4	0	Nudix	N-terminal
zf-Mss51	PF13824.6	gi|288561099|ref|YP_003424585.1|	-	0.2	11.8	6.2	22	5.2	0.0	3.2	3	0	0	3	3	3	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
Cys_rich_CPXG	PF14255.6	gi|288561099|ref|YP_003424585.1|	-	0.2	11.6	6.1	9.4	6.2	0.2	3.5	3	0	0	3	3	3	0	Cysteine-rich	CPXCG
C1_1	PF00130.22	gi|288561099|ref|YP_003424585.1|	-	0.33	10.9	5.2	21	5.1	0.0	3.3	3	1	0	3	3	3	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
DnaJ_CXXCXGXG	PF00684.19	gi|288561099|ref|YP_003424585.1|	-	0.37	11.2	5.8	0.26	11.7	0.8	2.7	3	0	0	3	3	3	0	DnaJ	central	domain
FYVE	PF01363.21	gi|288561099|ref|YP_003424585.1|	-	0.49	10.6	0.2	0.49	10.6	0.2	2.5	2	1	0	2	2	2	0	FYVE	zinc	finger
TF_Zn_Ribbon	PF08271.12	gi|288561099|ref|YP_003424585.1|	-	0.54	9.8	12.1	0.45	10.1	4.0	3.7	3	1	0	3	3	3	0	TFIIB	zinc-binding
zf-C3HC4_3	PF13920.6	gi|288561099|ref|YP_003424585.1|	-	0.75	9.7	9.7	6	6.8	0.5	3.6	3	1	1	4	4	4	0	Zinc	finger,	C3HC4	type	(RING	finger)
YdjO	PF14169.6	gi|288561099|ref|YP_003424585.1|	-	0.94	9.3	6.9	2.2	8.0	0.5	3.4	2	1	1	3	3	3	0	Cold-inducible	protein	YdjO
Ogr_Delta	PF04606.12	gi|288561099|ref|YP_003424585.1|	-	1.1	9.3	13.9	17	5.5	0.1	4.3	4	0	0	4	4	4	0	Ogr/Delta-like	zinc	finger
NOB1_Zn_bind	PF08772.11	gi|288561099|ref|YP_003424585.1|	-	1.1	9.4	5.3	7.7	6.8	0.5	2.8	3	0	0	3	3	3	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
FYVE_2	PF02318.16	gi|288561099|ref|YP_003424585.1|	-	1.2	9.4	11.8	0.33	11.2	2.9	2.7	2	1	1	3	3	2	0	FYVE-type	zinc	finger
zinc_ribbon_15	PF17032.5	gi|288561099|ref|YP_003424585.1|	-	1.2	9.9	12.8	8.8	7.2	7.9	2.9	1	1	1	2	2	2	0	zinc-ribbon	family
Thioredoxin_3	PF13192.6	gi|288561099|ref|YP_003424585.1|	-	3.7	7.7	10.1	12	6.1	0.3	3.7	3	1	1	4	4	4	0	Thioredoxin	domain
HP0268	PF18618.1	gi|288561099|ref|YP_003424585.1|	-	4.1	7.9	9.3	1.8	9.0	0.3	2.7	1	1	0	2	2	2	0	HP0268
zf-IS66	PF13005.7	gi|288561099|ref|YP_003424585.1|	-	4.8	7.7	10.9	34	4.9	0.6	4.0	3	1	1	4	4	4	0	zinc-finger	binding	domain	of	transposase	IS66
zinc_ribbon_9	PF14369.6	gi|288561099|ref|YP_003424585.1|	-	5.3	7.4	12.2	48	4.3	0.0	3.8	3	1	1	4	4	4	0	zinc-ribbon
Zn_Tnp_IS1595	PF12760.7	gi|288561099|ref|YP_003424585.1|	-	8.9	6.4	12.1	10	6.2	0.0	3.5	3	1	1	4	4	4	0	Transposase	zinc-ribbon	domain
UPF0052	PF01933.18	gi|288561100|ref|YP_003424586.1|	-	5.2e-40	137.5	0.1	6.2e-40	137.3	0.1	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0052
GCH_III	PF05165.12	gi|288561101|ref|YP_003424587.1|	-	1.9e-100	335.2	0.3	2.3e-100	334.9	0.3	1.0	1	0	0	1	1	1	1	GTP	cyclohydrolase	III
mCpol	PF18182.1	gi|288561101|ref|YP_003424587.1|	-	3.9e-07	30.4	0.4	0.012	15.9	0.1	2.2	2	0	0	2	2	2	2	minimal	CRISPR	polymerase	domain
GGDEF_2	PF17853.1	gi|288561101|ref|YP_003424587.1|	-	1.6e-05	25.1	0.0	0.014	15.6	0.0	2.2	2	0	0	2	2	2	2	GGDEF-like	domain
Dus	PF01207.17	gi|288561102|ref|YP_003424588.1|	-	4.5e-17	62.1	1.7	7e-17	61.5	1.7	1.3	1	1	0	1	1	1	1	Dihydrouridine	synthase	(Dus)
His_biosynth	PF00977.21	gi|288561102|ref|YP_003424588.1|	-	1.5e-05	24.6	0.6	5.4e-05	22.8	0.2	1.9	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
NanE	PF04131.14	gi|288561102|ref|YP_003424588.1|	-	0.0012	18.1	1.6	0.0059	15.8	0.6	2.2	2	1	0	2	2	2	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
DHO_dh	PF01180.21	gi|288561102|ref|YP_003424588.1|	-	0.012	14.8	2.6	2.3	7.3	2.6	2.1	1	1	0	1	1	1	0	Dihydroorotate	dehydrogenase
Radical_SAM	PF04055.21	gi|288561102|ref|YP_003424588.1|	-	0.02	15.3	0.0	3.9	7.8	0.0	2.7	1	1	2	3	3	3	0	Radical	SAM	superfamily
UBA_2	PF08587.11	gi|288561102|ref|YP_003424588.1|	-	0.038	14.1	0.1	0.17	12.0	0.1	2.1	1	0	0	1	1	1	0	Ubiquitin	associated	domain	(UBA)
Cytochrom_C552	PF02335.15	gi|288561102|ref|YP_003424588.1|	-	0.21	10.5	0.0	0.3	10.0	0.0	1.1	1	0	0	1	1	1	0	Cytochrome	c552
ADH_N	PF08240.12	gi|288561103|ref|YP_003424589.1|	-	7.1e-30	103.1	0.4	1.1e-29	102.5	0.4	1.3	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.26	gi|288561103|ref|YP_003424589.1|	-	1.7e-16	60.4	0.3	3.1e-16	59.5	0.3	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.6	gi|288561103|ref|YP_003424589.1|	-	6.6e-08	33.7	0.1	1.8e-07	32.2	0.1	1.8	2	0	0	2	2	2	1	Zinc-binding	dehydrogenase
Shikimate_DH	PF01488.20	gi|288561103|ref|YP_003424589.1|	-	0.0018	18.4	0.0	0.003	17.6	0.0	1.3	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
TrkA_N	PF02254.18	gi|288561103|ref|YP_003424589.1|	-	0.01	16.1	0.3	0.021	15.1	0.3	1.5	1	0	0	1	1	1	0	TrkA-N	domain
ApbA	PF02558.16	gi|288561103|ref|YP_003424589.1|	-	0.053	13.2	0.0	0.099	12.3	0.0	1.5	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
TfoX_C	PF04994.13	gi|288561104|ref|YP_003424590.1|	-	4.2e-24	84.4	0.2	4.6e-24	84.3	0.2	1.0	1	0	0	1	1	1	1	TfoX	C-terminal	domain
Cdd1	PF11731.8	gi|288561104|ref|YP_003424590.1|	-	0.00043	20.5	0.1	0.00057	20.1	0.1	1.5	1	1	0	1	1	1	1	Pathogenicity	locus
IMS_HHH	PF11798.8	gi|288561104|ref|YP_003424590.1|	-	0.00089	19.4	0.1	0.0029	17.8	0.0	1.9	2	0	0	2	2	2	1	IMS	family	HHH	motif
DUF4332	PF14229.6	gi|288561104|ref|YP_003424590.1|	-	0.066	13.5	0.1	0.071	13.3	0.1	1.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4332)
HHH_5	PF14520.6	gi|288561104|ref|YP_003424590.1|	-	0.11	13.1	0.2	0.16	12.6	0.2	1.4	1	1	0	1	1	1	0	Helix-hairpin-helix	domain
DUF134	PF02001.16	gi|288561105|ref|YP_003424591.1|	-	9.1e-26	90.3	0.2	1.8e-25	89.4	0.1	1.5	2	0	0	2	2	1	1	Protein	of	unknown	function	DUF134
HypA	PF01155.19	gi|288561105|ref|YP_003424591.1|	-	5.8e-05	23.1	10.4	0.00023	21.1	0.1	2.3	2	0	0	2	2	2	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Zn-ribbon_8	PF09723.10	gi|288561105|ref|YP_003424591.1|	-	0.00033	20.7	13.9	0.015	15.4	0.4	3.1	2	1	0	2	2	2	2	Zinc	ribbon	domain
HTH_Crp_2	PF13545.6	gi|288561105|ref|YP_003424591.1|	-	0.0013	18.6	0.0	0.0024	17.8	0.0	1.4	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_10	PF04967.12	gi|288561105|ref|YP_003424591.1|	-	0.0027	17.5	0.0	0.0045	16.8	0.0	1.3	1	0	0	1	1	1	1	HTH	DNA	binding	domain
Sigma70_r4_2	PF08281.12	gi|288561105|ref|YP_003424591.1|	-	0.0057	16.3	0.0	0.0094	15.6	0.0	1.3	1	0	0	1	1	1	1	Sigma-70,	region	4
TackOD1	PF18551.1	gi|288561105|ref|YP_003424591.1|	-	0.0094	15.6	0.8	0.0094	15.6	0.8	2.3	2	1	0	2	2	2	1	Thaumarchaeal	output	domain	1
HTH_29	PF13551.6	gi|288561105|ref|YP_003424591.1|	-	0.01	15.8	0.0	0.024	14.7	0.0	1.6	1	0	0	1	1	1	0	Winged	helix-turn	helix
HTH_23	PF13384.6	gi|288561105|ref|YP_003424591.1|	-	0.011	15.5	0.0	0.021	14.6	0.0	1.4	1	0	0	1	1	1	0	Homeodomain-like	domain
Zn_Tnp_IS91	PF14319.6	gi|288561105|ref|YP_003424591.1|	-	0.012	15.6	10.6	0.048	13.7	3.6	2.4	2	0	0	2	2	2	0	Transposase	zinc-binding	domain
NOB1_Zn_bind	PF08772.11	gi|288561105|ref|YP_003424591.1|	-	0.016	15.3	0.6	0.016	15.3	0.6	2.9	2	1	0	2	2	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
HTH_37	PF13744.6	gi|288561105|ref|YP_003424591.1|	-	0.019	14.9	0.0	0.038	14.0	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
PhnA_Zn_Ribbon	PF08274.12	gi|288561105|ref|YP_003424591.1|	-	0.03	14.3	0.3	0.03	14.3	0.3	4.7	5	0	0	5	5	5	0	PhnA	Zinc-Ribbon
HTH_1	PF00126.27	gi|288561105|ref|YP_003424591.1|	-	0.036	14.0	0.0	0.062	13.3	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
Mss4	PF04421.13	gi|288561105|ref|YP_003424591.1|	-	0.039	14.1	0.2	0.066	13.4	0.2	1.4	1	0	0	1	1	1	0	Mss4	protein
Sigma70_r4	PF04545.16	gi|288561105|ref|YP_003424591.1|	-	0.041	13.4	0.0	0.074	12.6	0.0	1.4	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_3	PF01381.22	gi|288561105|ref|YP_003424591.1|	-	0.047	13.7	0.0	0.082	13.0	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix
HTH_24	PF13412.6	gi|288561105|ref|YP_003424591.1|	-	0.072	12.7	0.0	0.13	11.8	0.0	1.4	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
HTH_17	PF12728.7	gi|288561105|ref|YP_003424591.1|	-	0.085	13.1	0.0	0.17	12.1	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
zf-ribbon_3	PF13248.6	gi|288561105|ref|YP_003424591.1|	-	0.11	12.0	24.7	0.32	10.5	0.3	4.2	3	1	0	3	3	3	0	zinc-ribbon	domain
A2L_zn_ribbon	PF08792.10	gi|288561105|ref|YP_003424591.1|	-	0.11	12.2	17.8	0.095	12.5	2.3	4.4	4	0	0	4	4	4	0	A2L	zinc	ribbon	domain
Serglycin	PF04360.12	gi|288561105|ref|YP_003424591.1|	-	0.24	11.4	1.6	0.37	10.7	1.6	1.2	1	0	0	1	1	1	0	Serglycin
OrfB_Zn_ribbon	PF07282.11	gi|288561105|ref|YP_003424591.1|	-	0.47	10.4	18.3	1.2	9.1	6.6	3.2	3	1	0	3	3	3	0	Putative	transposase	DNA-binding	domain
Rubredoxin_2	PF18073.1	gi|288561105|ref|YP_003424591.1|	-	0.89	9.3	18.8	0.46	10.3	0.6	4.1	3	1	0	3	3	3	0	Rubredoxin	metal	binding	domain
TF_Zn_Ribbon	PF08271.12	gi|288561105|ref|YP_003424591.1|	-	1.2	8.7	18.9	4	7.0	0.1	4.6	4	0	0	4	4	4	0	TFIIB	zinc-binding
TFIIS_C	PF01096.18	gi|288561105|ref|YP_003424591.1|	-	4	7.4	19.7	0.86	9.5	0.3	4.4	4	0	0	4	4	4	0	Transcription	factor	S-II	(TFIIS)
DNA_ligase_ZBD	PF03119.16	gi|288561105|ref|YP_003424591.1|	-	5.6	7.1	17.2	6.3	6.9	3.0	4.2	4	1	0	4	4	4	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
UPF0547	PF10571.9	gi|288561105|ref|YP_003424591.1|	-	7.9	6.7	25.5	15	5.8	0.2	5.2	5	0	0	5	5	5	0	Uncharacterised	protein	family	UPF0547
Ribosomal_S27e	PF01667.17	gi|288561105|ref|YP_003424591.1|	-	8.6	6.2	11.8	3.6	7.4	5.5	2.8	3	0	0	3	3	3	0	Ribosomal	protein	S27
ABC_tran	PF00005.27	gi|288561106|ref|YP_003424592.1|	-	3.2e-56	189.6	0.0	6.9e-27	94.6	0.0	2.4	2	0	0	2	2	2	2	ABC	transporter
SMC_N	PF02463.19	gi|288561106|ref|YP_003424592.1|	-	6.5e-09	35.5	2.1	0.0032	16.9	0.0	3.9	3	1	0	3	3	3	2	RecF/RecN/SMC	N	terminal	domain
RsgA_GTPase	PF03193.16	gi|288561106|ref|YP_003424592.1|	-	1.2e-06	28.5	1.2	0.014	15.3	0.1	2.4	2	0	0	2	2	2	2	RsgA	GTPase
AAA_22	PF13401.6	gi|288561106|ref|YP_003424592.1|	-	2.1e-05	24.8	0.3	0.12	12.7	0.0	2.7	2	1	0	2	2	2	2	AAA	domain
AAA_21	PF13304.6	gi|288561106|ref|YP_003424592.1|	-	3.4e-05	23.8	1.2	5.9	6.6	0.0	4.1	4	0	0	4	4	4	1	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_29	PF13555.6	gi|288561106|ref|YP_003424592.1|	-	5.8e-05	22.7	3.7	0.13	12.0	0.2	2.5	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
ATP-synt_ab	PF00006.25	gi|288561106|ref|YP_003424592.1|	-	0.00039	20.2	0.0	0.61	9.7	0.0	2.3	2	0	0	2	2	2	2	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
MMR_HSR1	PF01926.23	gi|288561106|ref|YP_003424592.1|	-	0.00048	20.2	1.8	0.31	11.1	0.1	3.3	3	0	0	3	3	2	1	50S	ribosome-binding	GTPase
AAA_16	PF13191.6	gi|288561106|ref|YP_003424592.1|	-	0.00057	20.3	0.4	0.85	10.0	0.2	2.7	2	1	0	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.6	gi|288561106|ref|YP_003424592.1|	-	0.0027	18.2	0.2	3.1	8.2	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
SbcCD_C	PF13558.6	gi|288561106|ref|YP_003424592.1|	-	0.0058	16.8	0.0	14	6.0	0.0	3.6	2	2	0	2	2	2	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_30	PF13604.6	gi|288561106|ref|YP_003424592.1|	-	0.0079	15.9	0.4	2.8	7.6	0.1	3.0	3	0	0	3	3	3	1	AAA	domain
Lum_binding	PF00677.17	gi|288561106|ref|YP_003424592.1|	-	0.011	15.7	0.1	0.024	14.6	0.1	1.5	1	0	0	1	1	1	0	Lumazine	binding	domain
MobB	PF03205.14	gi|288561106|ref|YP_003424592.1|	-	0.013	15.4	2.3	0.33	10.8	0.2	2.8	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
DUF87	PF01935.17	gi|288561106|ref|YP_003424592.1|	-	0.017	15.2	2.1	1.5	8.9	0.0	2.6	2	0	0	2	2	2	0	Helicase	HerA,	central	domain
AAA_33	PF13671.6	gi|288561106|ref|YP_003424592.1|	-	0.026	14.7	1.1	0.34	11.1	0.2	2.7	2	1	0	2	2	2	0	AAA	domain
AAA_18	PF13238.6	gi|288561106|ref|YP_003424592.1|	-	0.039	14.5	1.9	4.8	7.7	0.2	3.3	3	1	0	3	3	3	0	AAA	domain
zf-C4_Topoisom	PF01396.19	gi|288561106|ref|YP_003424592.1|	-	0.04	13.7	0.1	0.072	12.9	0.1	1.4	1	0	0	1	1	1	0	Topoisomerase	DNA	binding	C4	zinc	finger
NB-ARC	PF00931.22	gi|288561106|ref|YP_003424592.1|	-	0.06	12.5	3.7	3.5	6.8	0.8	2.5	2	0	0	2	2	2	0	NB-ARC	domain
ATPase_2	PF01637.18	gi|288561106|ref|YP_003424592.1|	-	0.062	13.2	0.4	4	7.3	0.1	2.4	2	0	0	2	2	2	0	ATPase	domain	predominantly	from	Archaea
FtsK_SpoIIIE	PF01580.18	gi|288561106|ref|YP_003424592.1|	-	0.066	12.6	0.8	2.8	7.2	0.0	2.4	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
zinc_ribbon_2	PF13240.6	gi|288561106|ref|YP_003424592.1|	-	0.1	12.4	0.2	0.17	11.7	0.2	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
cobW	PF02492.19	gi|288561106|ref|YP_003424592.1|	-	0.13	11.8	7.2	1.9	8.0	0.4	4.0	4	1	1	5	5	5	0	CobW/HypB/UreG,	nucleotide-binding	domain
BCA_ABC_TP_C	PF12399.8	gi|288561106|ref|YP_003424592.1|	-	0.19	11.7	0.6	3.7	7.6	0.0	2.4	2	0	0	2	2	2	0	Branched-chain	amino	acid	ATP-binding	cassette	transporter
AAA_24	PF13479.6	gi|288561106|ref|YP_003424592.1|	-	0.19	11.4	1.2	7.1	6.3	0.1	2.5	2	0	0	2	2	2	0	AAA	domain
NACHT	PF05729.12	gi|288561106|ref|YP_003424592.1|	-	0.25	11.2	1.2	22	4.9	0.0	2.5	2	0	0	2	2	2	0	NACHT	domain
AAA_7	PF12775.7	gi|288561106|ref|YP_003424592.1|	-	0.26	10.8	0.6	11	5.4	0.0	2.3	2	0	0	2	2	2	0	P-loop	containing	dynein	motor	region
Zeta_toxin	PF06414.12	gi|288561106|ref|YP_003424592.1|	-	0.42	9.9	1.9	19	4.5	0.0	3.0	3	1	0	3	3	3	0	Zeta	toxin
Integrase_Zn	PF02022.19	gi|288561107|ref|YP_003424593.1|	-	0.024	14.6	0.0	0.068	13.1	0.0	1.7	2	0	0	2	2	2	0	Integrase	Zinc	binding	domain
GIT_CC	PF16559.5	gi|288561107|ref|YP_003424593.1|	-	0.038	13.9	0.1	4	7.4	0.0	2.3	2	0	0	2	2	2	0	GIT	coiled-coil	Rho	guanine	nucleotide	exchange	factor
Seryl_tRNA_N	PF02403.22	gi|288561107|ref|YP_003424593.1|	-	0.069	13.4	2.9	0.1	12.9	2.9	1.2	1	0	0	1	1	1	0	Seryl-tRNA	synthetase	N-terminal	domain
UBA_4	PF14555.6	gi|288561107|ref|YP_003424593.1|	-	0.11	12.3	0.0	0.19	11.6	0.0	1.3	1	0	0	1	1	1	0	UBA-like	domain
NAD_binding_7	PF13241.6	gi|288561108|ref|YP_003424594.1|	-	1.4e-18	67.3	0.0	2.8e-18	66.3	0.0	1.5	1	0	0	1	1	1	1	Putative	NAD(P)-binding
2-Hacid_dh_C	PF02826.19	gi|288561108|ref|YP_003424594.1|	-	2.9e-06	26.8	0.0	6.2e-06	25.7	0.0	1.5	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Shikimate_DH	PF01488.20	gi|288561108|ref|YP_003424594.1|	-	4.8e-06	26.7	0.3	2.4e-05	24.4	0.0	2.2	2	1	1	3	3	3	1	Shikimate	/	quinate	5-dehydrogenase
Sirohm_synth_M	PF14824.6	gi|288561108|ref|YP_003424594.1|	-	5.8e-05	22.4	0.4	0.00014	21.2	0.0	1.8	2	0	0	2	2	2	1	Sirohaem	biosynthesis	protein	central
IlvN	PF07991.12	gi|288561108|ref|YP_003424594.1|	-	0.0012	18.5	0.3	0.0032	17.1	0.0	1.7	2	0	0	2	2	2	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
F420_oxidored	PF03807.17	gi|288561108|ref|YP_003424594.1|	-	0.0013	19.3	0.2	0.0058	17.2	0.0	2.0	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
AdoHcyase_NAD	PF00670.21	gi|288561108|ref|YP_003424594.1|	-	0.055	13.5	0.0	0.13	12.4	0.0	1.6	1	0	0	1	1	1	0	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
Shikimate_DH	PF01488.20	gi|288561109|ref|YP_003424595.1|	-	5.7e-42	143.1	0.1	1.3e-41	141.9	0.1	1.6	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
GlutR_N	PF05201.15	gi|288561109|ref|YP_003424595.1|	-	3.3e-31	108.0	0.0	7.1e-31	106.9	0.0	1.6	1	0	0	1	1	1	1	Glutamyl-tRNAGlu	reductase,	N-terminal	domain
GlutR_dimer	PF00745.20	gi|288561109|ref|YP_003424595.1|	-	2.2e-13	50.5	2.8	6e-13	49.1	2.8	1.7	1	0	0	1	1	1	1	Glutamyl-tRNAGlu	reductase,	dimerisation	domain
F420_oxidored	PF03807.17	gi|288561109|ref|YP_003424595.1|	-	1.1e-05	25.9	0.9	4.6e-05	23.9	0.1	2.4	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_7	PF13241.6	gi|288561109|ref|YP_003424595.1|	-	3.1e-05	24.4	0.0	0.00011	22.6	0.0	1.9	1	0	0	1	1	1	1	Putative	NAD(P)-binding
2-Hacid_dh_C	PF02826.19	gi|288561109|ref|YP_003424595.1|	-	6.5e-05	22.4	0.0	0.00014	21.3	0.0	1.5	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Glu_dehyd_C	PF16912.5	gi|288561109|ref|YP_003424595.1|	-	0.00013	21.5	0.0	0.00025	20.6	0.0	1.4	1	0	0	1	1	1	1	Glucose	dehydrogenase	C-terminus
NAD_binding_2	PF03446.15	gi|288561109|ref|YP_003424595.1|	-	0.00071	19.8	0.0	0.0018	18.4	0.0	1.7	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
OCD_Mu_crystall	PF02423.15	gi|288561109|ref|YP_003424595.1|	-	0.0011	18.0	1.1	0.0027	16.7	0.0	1.9	2	0	0	2	2	2	1	Ornithine	cyclodeaminase/mu-crystallin	family
THF_DHG_CYH_C	PF02882.19	gi|288561109|ref|YP_003424595.1|	-	0.0016	17.8	0.1	0.032	13.6	0.1	2.5	2	1	0	2	2	2	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
DapB_N	PF01113.20	gi|288561109|ref|YP_003424595.1|	-	0.0017	18.5	0.0	0.0052	16.9	0.0	1.9	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
Sacchrp_dh_NADP	PF03435.18	gi|288561109|ref|YP_003424595.1|	-	0.0025	18.1	0.7	0.0077	16.5	0.0	2.1	2	0	0	2	2	2	1	Saccharopine	dehydrogenase	NADP	binding	domain
ApbA	PF02558.16	gi|288561109|ref|YP_003424595.1|	-	0.0042	16.7	0.1	0.009	15.7	0.1	1.5	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
ThiF	PF00899.21	gi|288561109|ref|YP_003424595.1|	-	0.0082	15.5	0.1	0.014	14.8	0.1	1.3	1	0	0	1	1	1	1	ThiF	family
TrkA_N	PF02254.18	gi|288561109|ref|YP_003424595.1|	-	0.019	15.2	0.2	0.063	13.5	0.0	2.1	2	0	0	2	2	1	0	TrkA-N	domain
IlvN	PF07991.12	gi|288561109|ref|YP_003424595.1|	-	0.032	13.8	0.0	0.072	12.7	0.0	1.6	1	0	0	1	1	1	0	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
GFO_IDH_MocA	PF01408.22	gi|288561109|ref|YP_003424595.1|	-	0.065	14.1	0.1	0.28	12.0	0.0	2.0	2	0	0	2	2	2	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
AAA	PF00004.29	gi|288561110|ref|YP_003424596.1|	-	8.7e-36	123.3	0.0	1.5e-35	122.5	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.12	gi|288561110|ref|YP_003424596.1|	-	4.5e-08	33.0	0.0	9.6e-08	31.9	0.0	1.5	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_2	PF07724.14	gi|288561110|ref|YP_003424596.1|	-	9.6e-07	29.1	0.2	2e-05	24.7	0.0	2.3	2	0	0	2	2	2	1	AAA	domain	(Cdc48	subfamily)
TIP49	PF06068.13	gi|288561110|ref|YP_003424596.1|	-	1.5e-05	24.3	0.0	4.4e-05	22.9	0.0	1.8	2	1	0	2	2	2	1	TIP49	P-loop	domain
AAA_22	PF13401.6	gi|288561110|ref|YP_003424596.1|	-	2.4e-05	24.6	0.1	0.0041	17.4	0.0	2.5	1	1	1	2	2	2	1	AAA	domain
AAA_16	PF13191.6	gi|288561110|ref|YP_003424596.1|	-	5.7e-05	23.6	0.1	0.0037	17.7	0.0	2.3	1	1	1	2	2	2	1	AAA	ATPase	domain
AAA_5	PF07728.14	gi|288561110|ref|YP_003424596.1|	-	0.00026	21.0	0.1	0.0015	18.6	0.1	2.2	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_lid_3	PF17862.1	gi|288561110|ref|YP_003424596.1|	-	0.00034	20.3	0.1	0.00085	19.1	0.1	1.7	1	0	0	1	1	1	1	AAA+	lid	domain
AAA_33	PF13671.6	gi|288561110|ref|YP_003424596.1|	-	0.00041	20.5	0.0	0.00072	19.7	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
Mg_chelatase	PF01078.21	gi|288561110|ref|YP_003424596.1|	-	0.00057	19.3	0.0	0.0012	18.2	0.0	1.6	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
DUF815	PF05673.13	gi|288561110|ref|YP_003424596.1|	-	0.00091	18.5	0.1	0.0021	17.3	0.0	1.6	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF815)
AAA_7	PF12775.7	gi|288561110|ref|YP_003424596.1|	-	0.0011	18.5	0.0	0.0057	16.2	0.0	2.0	2	0	0	2	2	2	1	P-loop	containing	dynein	motor	region
Bac_DnaA	PF00308.18	gi|288561110|ref|YP_003424596.1|	-	0.0014	18.5	0.1	0.0023	17.8	0.1	1.3	1	0	0	1	1	1	1	Bacterial	dnaA	protein
AAA_18	PF13238.6	gi|288561110|ref|YP_003424596.1|	-	0.0015	19.1	0.0	0.0037	17.8	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.17	gi|288561110|ref|YP_003424596.1|	-	0.0015	18.3	0.0	0.0027	17.5	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_28	PF13521.6	gi|288561110|ref|YP_003424596.1|	-	0.0016	18.7	0.0	0.0032	17.7	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_14	PF13173.6	gi|288561110|ref|YP_003424596.1|	-	0.0032	17.5	0.2	0.018	15.1	0.0	2.4	3	0	0	3	3	3	1	AAA	domain
RNA_helicase	PF00910.22	gi|288561110|ref|YP_003424596.1|	-	0.0032	17.8	0.2	0.022	15.1	0.0	2.4	2	0	0	2	2	2	1	RNA	helicase
TsaE	PF02367.17	gi|288561110|ref|YP_003424596.1|	-	0.0069	16.4	0.0	0.014	15.4	0.0	1.5	1	0	0	1	1	1	1	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_3	PF07726.11	gi|288561110|ref|YP_003424596.1|	-	0.0079	16.1	0.0	0.015	15.1	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Parvo_NS1	PF01057.17	gi|288561110|ref|YP_003424596.1|	-	0.0087	15.2	0.0	0.017	14.2	0.0	1.4	1	0	0	1	1	1	1	Parvovirus	non-structural	protein	NS1
NACHT	PF05729.12	gi|288561110|ref|YP_003424596.1|	-	0.011	15.7	0.0	0.073	13.0	0.0	2.1	2	0	0	2	2	2	0	NACHT	domain
AAA_24	PF13479.6	gi|288561110|ref|YP_003424596.1|	-	0.025	14.3	0.0	0.044	13.5	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_25	PF13481.6	gi|288561110|ref|YP_003424596.1|	-	0.038	13.6	1.0	0.31	10.6	0.2	2.2	1	1	1	2	2	2	0	AAA	domain
AAA_19	PF13245.6	gi|288561110|ref|YP_003424596.1|	-	0.045	14.1	0.0	0.072	13.4	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
ATPase	PF06745.13	gi|288561110|ref|YP_003424596.1|	-	0.047	13.0	0.0	1.2	8.4	0.0	2.3	2	0	0	2	2	2	0	KaiC
DUF2075	PF09848.9	gi|288561110|ref|YP_003424596.1|	-	0.05	12.8	0.0	0.074	12.3	0.0	1.4	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
Sigma54_activat	PF00158.26	gi|288561110|ref|YP_003424596.1|	-	0.063	13.0	0.0	0.27	10.9	0.0	2.0	1	1	0	1	1	1	0	Sigma-54	interaction	domain
AAA_30	PF13604.6	gi|288561110|ref|YP_003424596.1|	-	0.079	12.7	0.1	0.23	11.2	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.12	gi|288561110|ref|YP_003424596.1|	-	0.088	12.1	0.0	0.21	10.8	0.0	1.6	1	0	0	1	1	1	0	Zeta	toxin
Viral_helicase1	PF01443.18	gi|288561110|ref|YP_003424596.1|	-	0.093	12.5	0.0	0.16	11.7	0.0	1.4	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
RsgA_GTPase	PF03193.16	gi|288561110|ref|YP_003424596.1|	-	0.1	12.5	0.0	0.32	10.9	0.0	1.6	1	1	0	1	1	1	0	RsgA	GTPase
AP_endonuc_2	PF01261.24	gi|288561111|ref|YP_003424597.1|	-	7.8e-15	54.9	0.0	1e-14	54.5	0.0	1.1	1	0	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
Gp_dh_C	PF02800.20	gi|288561112|ref|YP_003424598.1|	-	3.3e-31	108.0	0.5	5e-31	107.4	0.5	1.3	1	0	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
DapB_N	PF01113.20	gi|288561112|ref|YP_003424598.1|	-	4e-09	36.6	0.6	1.5e-08	34.8	0.2	2.1	2	1	0	2	2	2	1	Dihydrodipicolinate	reductase,	N-terminus
Gp_dh_N	PF00044.24	gi|288561112|ref|YP_003424598.1|	-	1.1e-06	28.9	2.7	1.3e-05	25.5	0.6	3.1	2	1	0	2	2	2	1	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
NAD_binding_3	PF03447.16	gi|288561112|ref|YP_003424598.1|	-	2.7e-05	24.8	1.6	0.015	15.9	0.0	3.5	3	1	0	3	3	3	1	Homoserine	dehydrogenase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.19	gi|288561112|ref|YP_003424598.1|	-	3.9e-05	23.1	0.1	0.0014	18.0	0.1	2.6	1	1	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
TrkA_N	PF02254.18	gi|288561112|ref|YP_003424598.1|	-	9.3e-05	22.7	1.0	0.00079	19.7	0.1	2.7	2	0	0	2	2	2	1	TrkA-N	domain
Sacchrp_dh_NADP	PF03435.18	gi|288561112|ref|YP_003424598.1|	-	0.00059	20.1	0.2	0.0031	17.8	0.0	2.2	2	1	0	2	2	2	1	Saccharopine	dehydrogenase	NADP	binding	domain
AAA_26	PF13500.6	gi|288561112|ref|YP_003424598.1|	-	0.017	15.0	0.1	0.06	13.2	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
F420_oxidored	PF03807.17	gi|288561112|ref|YP_003424598.1|	-	0.019	15.5	1.0	0.095	13.3	0.2	2.4	2	1	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
PglD_N	PF17836.1	gi|288561112|ref|YP_003424598.1|	-	0.13	12.9	0.0	0.97	10.1	0.0	2.3	2	0	0	2	2	2	0	PglD	N-terminal	domain
CoA_binding	PF02629.19	gi|288561112|ref|YP_003424598.1|	-	0.29	11.9	2.5	0.33	11.7	0.5	2.1	2	0	0	2	2	2	0	CoA	binding	domain
DUF2284	PF10050.9	gi|288561113|ref|YP_003424599.1|	-	2e-42	144.7	0.5	2.9e-42	144.2	0.5	1.2	1	0	0	1	1	1	1	Predicted	metal-binding	protein	(DUF2284)
Clusterin	PF01093.17	gi|288561114|ref|YP_003424600.1|	-	0.029	13.4	0.4	0.039	13.0	0.4	1.1	1	0	0	1	1	1	0	Clusterin
DUF1240	PF06836.12	gi|288561114|ref|YP_003424600.1|	-	0.042	14.4	4.5	0.17	12.4	0.4	2.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1240)
Tetraspanin	PF00335.20	gi|288561114|ref|YP_003424600.1|	-	0.068	12.9	3.5	0.3	10.8	3.5	2.0	1	1	0	1	1	1	0	Tetraspanin	family
PRESAN	PF09687.10	gi|288561114|ref|YP_003424600.1|	-	0.08	13.5	8.3	0.15	12.6	1.9	2.4	2	0	0	2	2	2	0	Plasmodium	RESA	N-terminal
COMMD1_N	PF17221.3	gi|288561114|ref|YP_003424600.1|	-	0.15	12.3	0.4	0.59	10.5	0.1	2.1	1	1	1	2	2	2	0	COMMD1	N-terminal	domain
Cdh1_DBD_1	PF18196.1	gi|288561114|ref|YP_003424600.1|	-	0.2	12.0	1.3	0.23	11.8	0.2	1.6	2	0	0	2	2	2	0	Chromodomain	helicase	DNA-binding	domain	1
AAA	PF00004.29	gi|288561116|ref|YP_003424602.1|	-	9e-19	68.2	0.0	4.2e-18	66.0	0.0	2.1	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_lid_6	PF17866.1	gi|288561116|ref|YP_003424602.1|	-	1.5e-18	66.7	0.4	3e-18	65.7	0.4	1.5	1	0	0	1	1	1	1	AAA	lid	domain
AAA_22	PF13401.6	gi|288561116|ref|YP_003424602.1|	-	4.8e-05	23.7	0.2	0.1	12.9	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
Mg_chelatase	PF01078.21	gi|288561116|ref|YP_003424602.1|	-	0.0017	17.8	0.1	0.1	12.0	0.0	2.3	1	1	1	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
RuvB_N	PF05496.12	gi|288561116|ref|YP_003424602.1|	-	0.0022	17.8	0.2	0.0084	15.9	0.2	2.0	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_16	PF13191.6	gi|288561116|ref|YP_003424602.1|	-	0.0024	18.3	0.0	0.0062	16.9	0.0	1.9	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_18	PF13238.6	gi|288561116|ref|YP_003424602.1|	-	0.0039	17.7	3.6	0.015	15.8	0.0	2.9	2	2	1	3	3	3	1	AAA	domain
AAA_5	PF07728.14	gi|288561116|ref|YP_003424602.1|	-	0.005	16.8	0.0	0.014	15.4	0.0	1.8	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
Sigma54_activat	PF00158.26	gi|288561116|ref|YP_003424602.1|	-	0.0097	15.6	0.1	0.16	11.7	0.1	2.3	1	1	0	1	1	1	1	Sigma-54	interaction	domain
RNA_helicase	PF00910.22	gi|288561116|ref|YP_003424602.1|	-	0.012	16.0	0.0	0.044	14.2	0.0	2.0	1	0	0	1	1	1	0	RNA	helicase
Sigma54_activ_2	PF14532.6	gi|288561116|ref|YP_003424602.1|	-	0.014	15.5	0.0	0.041	14.0	0.0	1.8	1	0	0	1	1	1	0	Sigma-54	interaction	domain
Torsin	PF06309.11	gi|288561116|ref|YP_003424602.1|	-	0.014	15.5	0.0	0.033	14.3	0.0	1.6	1	0	0	1	1	1	0	Torsin
AAA_17	PF13207.6	gi|288561116|ref|YP_003424602.1|	-	0.076	13.4	0.3	0.56	10.6	0.3	2.3	1	1	0	1	1	1	0	AAA	domain
AAA_28	PF13521.6	gi|288561116|ref|YP_003424602.1|	-	0.14	12.4	0.1	0.26	11.5	0.1	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_30	PF13604.6	gi|288561116|ref|YP_003424602.1|	-	0.18	11.5	0.0	0.29	10.8	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
ARD	PF03079.14	gi|288561116|ref|YP_003424602.1|	-	0.18	12.0	0.8	0.39	10.9	0.1	2.0	2	0	0	2	2	2	0	ARD/ARD'	family
HisKA	PF00512.25	gi|288561116|ref|YP_003424602.1|	-	0.53	10.4	1.9	14	5.8	0.1	3.2	3	0	0	3	3	3	0	His	Kinase	A	(phospho-acceptor)	domain
YL1	PF05764.13	gi|288561116|ref|YP_003424602.1|	-	3.3	7.8	8.6	6.1	6.9	8.6	1.4	1	0	0	1	1	1	0	YL1	nuclear	protein
E1-E2_ATPase	PF00122.20	gi|288561117|ref|YP_003424603.1|	-	4.7e-47	159.8	0.9	4.7e-47	159.8	0.9	2.4	3	0	0	3	3	3	1	E1-E2	ATPase
Hydrolase	PF00702.26	gi|288561117|ref|YP_003424603.1|	-	3.5e-35	122.2	0.0	5.8e-35	121.5	0.0	1.4	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Imm40	PF15569.6	gi|288561117|ref|YP_003424603.1|	-	0.017	15.2	3.1	0.047	13.8	1.4	2.5	1	1	1	2	2	2	0	Immunity	protein	40
Hydrolase_3	PF08282.12	gi|288561117|ref|YP_003424603.1|	-	0.057	13.1	0.1	0.18	11.5	0.1	1.8	1	0	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
DUF1290	PF06947.12	gi|288561117|ref|YP_003424603.1|	-	7	6.8	11.9	0.037	14.1	1.4	2.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1290)
Trns_repr_metal	PF02583.17	gi|288561118|ref|YP_003424604.1|	-	3.1e-23	81.9	0.4	3.5e-23	81.8	0.4	1.0	1	0	0	1	1	1	1	Metal-sensitive	transcriptional	repressor
Img2	PF05046.14	gi|288561118|ref|YP_003424604.1|	-	0.1	12.9	0.0	0.14	12.4	0.0	1.3	1	1	0	1	1	1	0	Mitochondrial	large	subunit	ribosomal	protein	(Img2)
TP6A_N	PF04406.14	gi|288561120|ref|YP_003424606.1|	-	3.5e-15	55.7	0.0	9.4e-15	54.4	0.0	1.8	2	0	0	2	2	2	1	Type	IIB	DNA	topoisomerase
Topo-VIb_trans	PF09239.11	gi|288561121|ref|YP_003424607.1|	-	5.9e-57	191.9	0.0	9.6e-57	191.3	0.0	1.3	1	0	0	1	1	1	1	Topoisomerase	VI	B	subunit,	transducer
HATPase_c	PF02518.26	gi|288561121|ref|YP_003424607.1|	-	2.7e-10	40.7	0.1	7.4e-10	39.3	0.1	1.8	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c_3	PF13589.6	gi|288561121|ref|YP_003424607.1|	-	1.6e-06	28.0	0.0	4.4e-06	26.6	0.0	1.8	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
Ferritin	PF00210.24	gi|288561121|ref|YP_003424607.1|	-	0.35	10.8	2.8	0.73	9.8	2.8	1.6	1	0	0	1	1	1	0	Ferritin-like	domain
KH_1	PF00013.29	gi|288561122|ref|YP_003424608.1|	-	7.4e-11	41.7	0.2	2.2e-06	27.4	0.0	2.4	2	0	0	2	2	2	2	KH	domain
KH_4	PF13083.6	gi|288561122|ref|YP_003424608.1|	-	0.0092	15.8	1.2	5.3	7.0	0.7	3.1	2	1	0	2	2	2	2	KH	domain
KH_2	PF07650.17	gi|288561122|ref|YP_003424608.1|	-	0.016	15.0	2.7	0.84	9.5	0.6	2.9	2	2	0	2	2	2	0	KH	domain
KH_8	PF17903.1	gi|288561122|ref|YP_003424608.1|	-	0.028	14.5	0.0	0.074	13.2	0.0	1.7	1	0	0	1	1	1	0	Krr1	KH1	domain
DUF3781	PF12636.7	gi|288561123|ref|YP_003424609.1|	-	6.2e-31	106.1	1.8	6.9e-31	105.9	1.8	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3781)
RIO1	PF01163.22	gi|288561124|ref|YP_003424610.1|	-	2e-58	197.1	0.1	3.1e-58	196.5	0.1	1.2	1	0	0	1	1	1	1	RIO1	family
YrbL-PhoP_reg	PF10707.9	gi|288561124|ref|YP_003424610.1|	-	0.00038	20.0	0.0	0.0059	16.2	0.0	2.2	2	1	0	2	2	2	1	PhoP	regulatory	network	protein	YrbL
Kdo	PF06293.14	gi|288561124|ref|YP_003424610.1|	-	0.00073	18.9	0.0	0.078	12.3	0.0	2.2	2	0	0	2	2	2	2	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
APH	PF01636.23	gi|288561124|ref|YP_003424610.1|	-	0.012	15.5	0.0	0.61	10.0	0.1	2.1	1	1	1	2	2	2	0	Phosphotransferase	enzyme	family
DUF5065	PF16723.5	gi|288561124|ref|YP_003424610.1|	-	0.1	12.7	0.2	0.23	11.5	0.2	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF5065)
Pkinase_Tyr	PF07714.17	gi|288561124|ref|YP_003424610.1|	-	0.1	11.8	0.0	0.2	10.9	0.0	1.6	1	1	0	1	1	1	0	Protein	tyrosine	kinase
eIF-1a	PF01176.19	gi|288561125|ref|YP_003424611.1|	-	3.6e-20	71.5	1.0	5.7e-20	70.9	1.0	1.3	1	0	0	1	1	1	1	Translation	initiation	factor	1A	/	IF-1
MoeA_N	PF03453.17	gi|288561126|ref|YP_003424612.1|	-	1.5e-36	125.5	0.0	2.4e-36	124.8	0.0	1.3	1	0	0	1	1	1	1	MoeA	N-terminal	region	(domain	I	and	II)
MoCF_biosynth	PF00994.24	gi|288561126|ref|YP_003424612.1|	-	8.3e-24	83.9	0.1	1.3e-23	83.2	0.1	1.3	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
MoeA_C	PF03454.15	gi|288561126|ref|YP_003424612.1|	-	1.9e-05	24.8	0.0	4.6e-05	23.5	0.0	1.6	1	0	0	1	1	1	1	MoeA	C-terminal	region	(domain	IV)
GyrI-like	PF06445.15	gi|288561127|ref|YP_003424613.1|	-	4.2e-17	62.9	3.6	4.7e-17	62.7	3.6	1.0	1	0	0	1	1	1	1	GyrI-like	small	molecule	binding	domain
DUF445	PF04286.12	gi|288561128|ref|YP_003424614.1|	-	2.2	8.0	11.2	2.4	7.9	11.2	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF445)
CemA	PF03040.14	gi|288561128|ref|YP_003424614.1|	-	3.2	7.6	8.0	3.8	7.4	8.0	1.2	1	0	0	1	1	1	0	CemA	family
PmbA_TldD	PF01523.16	gi|288561129|ref|YP_003424615.1|	-	1.5e-48	166.1	1.2	2e-48	165.7	1.2	1.2	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
Hydrolase_3	PF08282.12	gi|288561130|ref|YP_003424616.1|	-	2.5e-35	122.4	1.9	8.9e-22	78.0	0.6	2.0	1	1	1	2	2	2	2	haloacid	dehalogenase-like	hydrolase
S6PP	PF05116.13	gi|288561130|ref|YP_003424616.1|	-	1.7e-09	37.6	0.0	5.3e-07	29.4	0.0	2.1	2	0	0	2	2	2	2	Sucrose-6F-phosphate	phosphohydrolase
Hydrolase	PF00702.26	gi|288561130|ref|YP_003424616.1|	-	2.5e-07	31.2	0.9	0.18	12.1	0.2	3.2	2	1	1	3	3	3	3	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.7	gi|288561130|ref|YP_003424616.1|	-	5.5e-05	23.6	2.4	0.035	14.5	0.0	3.2	2	1	1	3	3	3	2	haloacid	dehalogenase-like	hydrolase
Hydrolase_6	PF13344.6	gi|288561130|ref|YP_003424616.1|	-	0.0018	18.4	0.0	0.0059	16.7	0.0	1.9	2	1	0	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
HypD	PF01924.16	gi|288561131|ref|YP_003424617.1|	-	3.6e-118	394.7	0.0	4.1e-118	394.5	0.0	1.0	1	0	0	1	1	1	1	Hydrogenase	formation	hypA	family
CTP_transf_3	PF02348.19	gi|288561132|ref|YP_003424618.1|	-	5.4e-25	88.6	0.3	1.5e-24	87.1	0.0	1.9	2	0	0	2	2	2	1	Cytidylyltransferase
Glyco_tran_28_C	PF04101.16	gi|288561132|ref|YP_003424618.1|	-	2.2e-09	37.5	0.0	4.2e-09	36.6	0.0	1.5	1	0	0	1	1	1	1	Glycosyltransferase	family	28	C-terminal	domain
Epimerase_2	PF02350.19	gi|288561132|ref|YP_003424618.1|	-	0.00045	19.2	0.1	0.0011	18.0	0.0	1.6	2	0	0	2	2	2	1	UDP-N-acetylglucosamine	2-epimerase
LpxB	PF02684.15	gi|288561132|ref|YP_003424618.1|	-	0.0021	17.0	0.0	0.004	16.0	0.0	1.4	1	0	0	1	1	1	1	Lipid-A-disaccharide	synthetase
Shikimate_DH	PF01488.20	gi|288561132|ref|YP_003424618.1|	-	0.096	12.8	0.1	0.35	10.9	0.1	1.9	2	0	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
DUF2207	PF09972.9	gi|288561133|ref|YP_003424619.1|	-	7e-07	28.4	15.9	0.0099	14.7	14.0	2.1	1	1	1	2	2	2	2	Predicted	membrane	protein	(DUF2207)
Mad3_BUB1_I	PF08311.12	gi|288561133|ref|YP_003424619.1|	-	0.081	12.9	5.0	0.052	13.5	2.1	2.0	1	1	1	2	2	2	0	Mad3/BUB1	homology	region	1
VasI	PF11319.8	gi|288561133|ref|YP_003424619.1|	-	0.18	11.5	0.7	0.32	10.6	0.7	1.3	1	0	0	1	1	1	0	Type	VI	secretion	system	VasI,	EvfG,	VC_A0118
NeuB	PF03102.14	gi|288561134|ref|YP_003424620.1|	-	4.3e-73	245.7	0.1	5.2e-73	245.4	0.1	1.1	1	0	0	1	1	1	1	NeuB	family
SAF	PF08666.12	gi|288561134|ref|YP_003424620.1|	-	3.3e-08	34.0	0.1	5.9e-08	33.2	0.1	1.4	1	0	0	1	1	1	1	SAF	domain
DUF2774	PF11242.8	gi|288561134|ref|YP_003424620.1|	-	0.0034	17.5	0.6	0.0086	16.3	0.1	1.9	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2774)
NAD_binding_9	PF13454.6	gi|288561135|ref|YP_003424621.1|	-	0.0017	18.4	0.0	0.0045	17.0	0.0	1.7	1	1	0	1	1	1	1	FAD-NAD(P)-binding
Ribosomal_S2	PF00318.20	gi|288561135|ref|YP_003424621.1|	-	0.04	13.1	0.7	0.1	11.8	0.7	1.7	1	0	0	1	1	1	0	Ribosomal	protein	S2
Y1_Tnp	PF01797.16	gi|288561135|ref|YP_003424621.1|	-	0.057	13.5	0.4	0.44	10.7	0.1	2.5	2	0	0	2	2	2	0	Transposase	IS200	like
Polysacc_synt_C	PF14667.6	gi|288561136|ref|YP_003424622.1|	-	1.7e-22	80.0	26.3	1.7e-22	80.0	26.3	3.9	4	1	0	4	4	4	2	Polysaccharide	biosynthesis	C-terminal	domain
Polysacc_synt	PF01943.17	gi|288561136|ref|YP_003424622.1|	-	1.9e-19	70.1	28.0	1.9e-19	70.1	28.0	2.4	2	1	0	2	2	2	1	Polysaccharide	biosynthesis	protein
Polysacc_synt_3	PF13440.6	gi|288561136|ref|YP_003424622.1|	-	3.5e-18	65.9	15.6	3.5e-18	65.9	15.6	2.3	2	0	0	2	2	2	1	Polysaccharide	biosynthesis	protein
MurJ	PF03023.14	gi|288561136|ref|YP_003424622.1|	-	1.2e-08	34.1	24.2	1.2e-08	34.1	24.2	3.1	1	1	1	3	3	3	2	Lipid	II	flippase	MurJ
MatE	PF01554.18	gi|288561136|ref|YP_003424622.1|	-	1.8e-08	34.2	8.2	1.8e-08	34.2	8.2	4.8	3	2	0	4	4	4	2	MatE
PelG	PF16933.5	gi|288561136|ref|YP_003424622.1|	-	6.8e-05	21.9	18.5	6.8e-05	21.9	18.5	3.1	2	1	1	3	3	3	1	Putative	exopolysaccharide	Exporter	(EPS-E)
Hexapep	PF00132.24	gi|288561137|ref|YP_003424623.1|	-	2.3e-10	39.8	11.4	2.6e-09	36.4	5.5	3.1	3	0	0	3	3	3	2	Bacterial	transferase	hexapeptide	(six	repeats)
Hexapep_2	PF14602.6	gi|288561137|ref|YP_003424623.1|	-	9e-06	25.3	5.5	9e-06	25.3	5.5	2.5	3	0	0	3	3	3	1	Hexapeptide	repeat	of	succinyl-transferase
GXGXG	PF01493.19	gi|288561137|ref|YP_003424623.1|	-	0.031	13.9	0.4	0.039	13.5	0.4	1.2	1	0	0	1	1	1	0	GXGXG	motif
zinc_ribbon_4	PF13717.6	gi|288561138|ref|YP_003424624.1|	-	0.00012	21.9	6.4	0.005	16.7	0.9	2.8	2	0	0	2	2	2	2	zinc-ribbon	domain
Cytochrom_c3_2	PF14537.6	gi|288561138|ref|YP_003424624.1|	-	0.00036	21.0	2.7	0.18	12.3	3.6	2.4	1	1	1	2	2	2	2	Cytochrome	c3
DUF2207	PF09972.9	gi|288561138|ref|YP_003424624.1|	-	0.00044	19.2	0.1	0.0009	18.1	0.1	1.5	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2207)
NERD	PF08378.11	gi|288561138|ref|YP_003424624.1|	-	0.0017	18.8	0.2	0.08	13.4	0.1	3.1	2	1	0	2	2	2	1	Nuclease-related	domain
TF_Zn_Ribbon	PF08271.12	gi|288561138|ref|YP_003424624.1|	-	0.0038	16.7	11.0	0.19	11.3	1.6	2.7	2	0	0	2	2	2	2	TFIIB	zinc-binding
HypA	PF01155.19	gi|288561138|ref|YP_003424624.1|	-	0.0054	16.7	5.7	0.86	9.6	1.2	2.3	1	1	1	2	2	2	2	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
VIT1	PF01988.19	gi|288561138|ref|YP_003424624.1|	-	0.029	14.3	0.0	0.053	13.4	0.0	1.5	1	0	0	1	1	1	0	VIT	family
DUF373	PF04123.13	gi|288561138|ref|YP_003424624.1|	-	0.029	13.8	0.9	0.045	13.2	0.9	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF373)
DZR	PF12773.7	gi|288561138|ref|YP_003424624.1|	-	0.12	12.4	4.4	0.7	10.0	4.4	2.1	1	1	0	1	1	1	0	Double	zinc	ribbon
zf-PHD-like	PF15446.6	gi|288561138|ref|YP_003424624.1|	-	0.2	11.3	1.3	0.39	10.3	1.3	1.5	1	0	0	1	1	1	0	PHD/FYVE-zinc-finger	like	domain
zinc_ribbon_15	PF17032.5	gi|288561138|ref|YP_003424624.1|	-	0.55	11.0	4.4	16	6.3	0.8	2.6	2	0	0	2	2	2	0	zinc-ribbon	family
IBR	PF01485.21	gi|288561138|ref|YP_003424624.1|	-	0.71	10.1	4.8	2.4	8.4	0.2	2.5	2	0	0	2	2	2	0	IBR	domain,	a	half	RING-finger	domain
Nudix_N_2	PF14803.6	gi|288561138|ref|YP_003424624.1|	-	0.88	9.5	7.5	4.6	7.3	1.0	3.4	3	2	1	4	4	4	0	Nudix	N-terminal
OrfB_Zn_ribbon	PF07282.11	gi|288561138|ref|YP_003424624.1|	-	1.1	9.2	3.9	12	5.9	0.6	2.7	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
FlhC	PF05280.11	gi|288561138|ref|YP_003424624.1|	-	1.6	8.4	6.0	11	5.7	0.5	2.7	3	0	0	3	3	3	0	Flagellar	transcriptional	activator	(FlhC)
DUF1272	PF06906.11	gi|288561138|ref|YP_003424624.1|	-	2.1	8.5	6.0	2.5	8.2	1.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1272)
zinc_ribbon_5	PF13719.6	gi|288561138|ref|YP_003424624.1|	-	2.9	7.7	5.0	9	6.2	0.6	2.6	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-AD	PF07776.15	gi|288561138|ref|YP_003424624.1|	-	7.4	6.9	6.5	48	4.3	0.4	2.8	1	1	1	2	2	2	0	Zinc-finger	associated	domain	(zf-AD)
Zn-ribbon_8	PF09723.10	gi|288561138|ref|YP_003424624.1|	-	7.4	6.8	11.0	19	5.5	0.2	3.6	1	1	3	4	4	4	0	Zinc	ribbon	domain
Glycos_transf_1	PF00534.20	gi|288561139|ref|YP_003424625.1|	-	1.2e-32	112.9	0.0	2.9e-32	111.6	0.0	1.6	1	1	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|288561139|ref|YP_003424625.1|	-	4.2e-25	88.7	0.0	7.3e-25	87.9	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|288561139|ref|YP_003424625.1|	-	3.1e-17	63.1	0.0	1e-16	61.4	0.0	1.8	2	0	0	2	2	2	1	Glycosyltransferase	Family	4
Glyco_trans_4_4	PF13579.6	gi|288561139|ref|YP_003424625.1|	-	5.2e-10	40.0	0.0	7e-10	39.6	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_1_2	PF13524.6	gi|288561139|ref|YP_003424625.1|	-	3.2e-06	27.5	0.0	6.6e-06	26.4	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_2	PF13477.6	gi|288561139|ref|YP_003424625.1|	-	2.1e-05	24.6	0.2	5.7e-05	23.2	0.3	1.7	2	0	0	2	2	2	1	Glycosyl	transferase	4-like
PMT_2	PF13231.6	gi|288561140|ref|YP_003424626.1|	-	6.3e-18	65.5	14.4	6.3e-18	65.5	14.4	4.4	5	1	0	5	5	5	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
UbiA	PF01040.18	gi|288561141|ref|YP_003424627.1|	-	1.8e-41	142.1	14.2	1.8e-41	142.1	14.2	1.3	1	1	0	1	1	1	1	UbiA	prenyltransferase	family
Glyco_transf_4	PF13439.6	gi|288561142|ref|YP_003424628.1|	-	3.6e-07	30.3	0.0	1.4e-05	25.2	0.0	2.2	1	1	0	1	1	1	1	Glycosyltransferase	Family	4
Glycos_transf_1	PF00534.20	gi|288561142|ref|YP_003424628.1|	-	2.8e-05	23.7	0.0	4.9e-05	22.9	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.6	gi|288561142|ref|YP_003424628.1|	-	0.036	14.5	0.0	2.7	8.4	0.0	2.1	2	0	0	2	2	2	0	Glycosyl	transferase	4-like	domain
Inos-1-P_synth	PF01658.17	gi|288561143|ref|YP_003424629.1|	-	1.6e-32	112.0	0.0	2.4e-32	111.4	0.0	1.3	1	0	0	1	1	1	1	Myo-inositol-1-phosphate	synthase
NAD_binding_5	PF07994.12	gi|288561143|ref|YP_003424629.1|	-	0.059	12.8	0.0	0.5	9.7	0.0	2.4	2	2	1	3	3	3	0	Myo-inositol-1-phosphate	synthase
PYC_OADA	PF02436.18	gi|288561144|ref|YP_003424630.1|	-	3.3e-56	190.2	0.1	5.6e-56	189.4	0.1	1.4	1	0	0	1	1	1	1	Conserved	carboxylase	domain
HMGL-like	PF00682.19	gi|288561144|ref|YP_003424630.1|	-	2.3e-43	148.7	0.0	3.1e-43	148.2	0.0	1.2	1	0	0	1	1	1	1	HMGL-like
Biotin_lipoyl	PF00364.22	gi|288561144|ref|YP_003424630.1|	-	1.2e-18	66.7	7.1	3.3e-18	65.3	7.1	1.7	1	0	0	1	1	1	1	Biotin-requiring	enzyme
Biotin_lipoyl_2	PF13533.6	gi|288561144|ref|YP_003424630.1|	-	1.4e-08	34.4	2.2	0.00012	21.9	0.2	2.6	1	1	1	2	2	2	2	Biotin-lipoyl	like
HlyD_3	PF13437.6	gi|288561144|ref|YP_003424630.1|	-	5.5e-06	27.0	1.1	0.013	16.2	0.0	3.2	3	0	0	3	3	3	2	HlyD	family	secretion	protein
HlyD_D23	PF16576.5	gi|288561144|ref|YP_003424630.1|	-	8.9e-06	25.1	2.5	0.024	13.9	0.0	2.7	2	1	1	3	3	3	2	Barrel-sandwich	domain	of	CusB	or	HlyD	membrane-fusion
GCV_H	PF01597.19	gi|288561144|ref|YP_003424630.1|	-	0.0028	17.5	0.8	0.0083	16.0	0.8	1.9	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
PTS_EIIA_1	PF00358.20	gi|288561144|ref|YP_003424630.1|	-	0.023	14.4	1.0	1.2	8.9	0.3	2.5	1	1	1	2	2	2	0	phosphoenolpyruvate-dependent	sugar	phosphotransferase	system,	EIIA	1
RnfC_N	PF13375.6	gi|288561144|ref|YP_003424630.1|	-	0.026	14.5	1.3	0.18	11.8	0.8	2.7	2	1	0	2	2	2	0	RnfC	Barrel	sandwich	hybrid	domain
QRPTase_N	PF02749.16	gi|288561144|ref|YP_003424630.1|	-	0.028	14.5	0.7	6	7.0	0.1	2.6	1	1	1	2	2	2	0	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
YqfD	PF06898.11	gi|288561144|ref|YP_003424630.1|	-	0.13	11.1	2.7	0.54	9.0	1.8	2.1	1	1	1	2	2	2	0	Putative	stage	IV	sporulation	protein	YqfD
Peptidase_M23	PF01551.22	gi|288561144|ref|YP_003424630.1|	-	0.24	11.6	1.0	1.5	9.1	1.0	2.1	1	1	0	1	1	1	0	Peptidase	family	M23
NQRA	PF05896.11	gi|288561144|ref|YP_003424630.1|	-	0.27	10.6	3.8	1.3	8.4	0.4	2.5	2	1	1	3	3	3	0	Na(+)-translocating	NADH-quinone	reductase	subunit	A	(NQRA)
LMBR1	PF04791.16	gi|288561145|ref|YP_003424631.1|	-	0.0046	15.9	0.1	0.005	15.8	0.1	1.1	1	0	0	1	1	1	1	LMBR1-like	membrane	protein
DUF2207	PF09972.9	gi|288561145|ref|YP_003424631.1|	-	0.54	9.0	3.1	1.3	7.7	1.7	1.9	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2207)
DUF3043	PF11241.8	gi|288561145|ref|YP_003424631.1|	-	4.9	7.2	4.7	8.4	6.4	4.7	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3043)
DUF111	PF01969.17	gi|288561146|ref|YP_003424632.1|	-	6.5e-116	387.5	0.0	7.5e-116	387.3	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF111
CobS	PF02654.15	gi|288561148|ref|YP_003424634.1|	-	1.1e-36	126.9	14.1	1.3e-36	126.7	14.1	1.0	1	0	0	1	1	1	1	Cobalamin-5-phosphate	synthase
Trm56	PF01994.16	gi|288561149|ref|YP_003424635.1|	-	1.2e-48	163.9	0.3	1.6e-48	163.6	0.3	1.1	1	0	0	1	1	1	1	tRNA	ribose	2'-O-methyltransferase,	aTrm56
SpoU_methylase	PF00588.19	gi|288561149|ref|YP_003424635.1|	-	0.024	14.8	0.0	0.035	14.3	0.0	1.2	1	0	0	1	1	1	0	SpoU	rRNA	Methylase	family
DJ-1_PfpI	PF01965.24	gi|288561149|ref|YP_003424635.1|	-	0.058	13.2	0.0	0.09	12.6	0.0	1.4	1	0	0	1	1	1	0	DJ-1/PfpI	family
DUF763	PF05559.11	gi|288561150|ref|YP_003424636.1|	-	5.2e-132	439.7	0.0	6.4e-132	439.4	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF763)
HHH	PF00633.23	gi|288561150|ref|YP_003424636.1|	-	0.015	15.1	0.0	0.028	14.3	0.0	1.5	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
Fumerase_C	PF05683.12	gi|288561151|ref|YP_003424637.1|	-	6.9e-23	81.1	0.0	9.9e-23	80.5	0.0	1.2	1	0	0	1	1	1	1	Fumarase	C-terminus
Pyridoxal_deC	PF00282.19	gi|288561152|ref|YP_003424638.1|	-	1.1e-31	109.9	0.0	2.3e-31	108.9	0.0	1.4	1	0	0	1	1	1	1	Pyridoxal-dependent	decarboxylase	conserved	domain
Aminotran_5	PF00266.19	gi|288561152|ref|YP_003424638.1|	-	5e-13	48.8	0.2	1.3e-09	37.5	0.1	2.2	2	0	0	2	2	2	2	Aminotransferase	class-V
DegT_DnrJ_EryC1	PF01041.17	gi|288561152|ref|YP_003424638.1|	-	4.1e-05	23.1	0.0	6.6e-05	22.4	0.0	1.3	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_1_2	PF00155.21	gi|288561152|ref|YP_003424638.1|	-	0.00091	18.5	0.0	0.0021	17.3	0.0	1.5	2	0	0	2	2	2	1	Aminotransferase	class	I	and	II
Beta_elim_lyase	PF01212.21	gi|288561152|ref|YP_003424638.1|	-	0.0052	16.1	0.1	0.012	14.9	0.0	1.6	1	1	0	1	1	1	1	Beta-eliminating	lyase
PPDK_N	PF01326.19	gi|288561153|ref|YP_003424639.1|	-	1.8e-117	392.3	0.6	3e-117	391.6	0.6	1.3	1	0	0	1	1	1	1	Pyruvate	phosphate	dikinase,	PEP/pyruvate	binding	domain
PEP-utilizers_C	PF02896.18	gi|288561153|ref|YP_003424639.1|	-	1e-83	280.8	0.1	1.6e-83	280.3	0.1	1.2	1	0	0	1	1	1	1	PEP-utilising	enzyme,	TIM	barrel	domain
PEP-utilizers	PF00391.23	gi|288561153|ref|YP_003424639.1|	-	1.1e-26	92.3	2.1	3.4e-26	90.8	2.1	1.9	1	0	0	1	1	1	1	PEP-utilising	enzyme,	mobile	domain
Epimerase_2	PF02350.19	gi|288561153|ref|YP_003424639.1|	-	0.021	13.7	0.1	0.12	11.3	0.0	2.2	3	0	0	3	3	3	0	UDP-N-acetylglucosamine	2-epimerase
Ribosomal_L16	PF00252.18	gi|288561154|ref|YP_003424640.1|	-	3.4e-31	108.0	0.5	4e-31	107.7	0.5	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L16p/L10e
Pcc1	PF09341.10	gi|288561155|ref|YP_003424641.1|	-	0.0017	18.4	0.0	0.0019	18.3	0.0	1.3	1	1	0	1	1	1	1	Transcription	factor	Pcc1
Orf78	PF06024.12	gi|288561156|ref|YP_003424642.1|	-	0.00013	22.2	0.1	0.00052	20.3	0.1	2.1	1	0	0	1	1	1	1	Orf78	(ac78)
zf-B_box	PF00643.24	gi|288561156|ref|YP_003424642.1|	-	0.0057	16.8	3.2	0.0057	16.8	3.2	2.1	2	0	0	2	2	2	1	B-box	zinc	finger
DUF2180	PF09947.9	gi|288561156|ref|YP_003424642.1|	-	0.063	13.3	5.5	0.062	13.3	3.9	1.9	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2180)
LIM	PF00412.22	gi|288561156|ref|YP_003424642.1|	-	0.22	11.8	2.9	0.48	10.7	2.9	1.5	1	0	0	1	1	1	0	LIM	domain
DUF4428	PF14471.6	gi|288561156|ref|YP_003424642.1|	-	0.28	11.2	3.3	0.59	10.1	3.3	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4428)
FYVE	PF01363.21	gi|288561156|ref|YP_003424642.1|	-	0.58	10.3	7.0	28	4.9	6.9	2.4	1	1	0	1	1	1	0	FYVE	zinc	finger
Sigma_reg_N	PF13800.6	gi|288561156|ref|YP_003424642.1|	-	2.2	8.6	4.3	5.7	7.3	4.3	1.6	1	0	0	1	1	1	0	Sigma	factor	regulator	N-terminal
LRRC37AB_C	PF14914.6	gi|288561156|ref|YP_003424642.1|	-	2.2	8.2	11.0	0.073	13.0	2.4	2.7	2	2	0	2	2	2	0	LRRC37A/B	like	protein	1	C-terminal	domain
FixQ	PF05545.11	gi|288561156|ref|YP_003424642.1|	-	4.6	7.3	5.6	15	5.6	5.6	1.8	1	0	0	1	1	1	0	Cbb3-type	cytochrome	oxidase	component	FixQ
C6_DPF	PF10170.9	gi|288561156|ref|YP_003424642.1|	-	5.8	7.4	8.3	1.6	9.1	4.6	1.9	2	0	0	2	2	2	0	Cysteine-rich	domain
FKBP26_C	PF18046.1	gi|288561157|ref|YP_003424643.1|	-	2.8e-25	88.2	1.6	5.7e-25	87.2	1.6	1.5	1	0	0	1	1	1	1	FKBP26_C-terminal
FKBP_C	PF00254.28	gi|288561157|ref|YP_003424643.1|	-	4.2e-13	49.4	0.3	2.5e-12	47.0	0.0	2.3	2	2	0	2	2	2	1	FKBP-type	peptidyl-prolyl	cis-trans	isomerase
Cauli_DNA-bind	PF03310.13	gi|288561157|ref|YP_003424643.1|	-	0.085	12.9	0.1	0.2	11.7	0.0	1.7	2	0	0	2	2	2	0	Caulimovirus	DNA-binding	protein
DUF3553	PF12073.8	gi|288561157|ref|YP_003424643.1|	-	0.15	11.8	1.7	0.81	9.5	0.3	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3553)
HIGH_NTase1_ass	PF16581.5	gi|288561158|ref|YP_003424644.1|	-	5e-93	310.8	4.1	6.7e-93	310.3	4.1	1.2	1	0	0	1	1	1	1	Cytidyltransferase-related	C-terminal	region
HIGH_NTase1	PF05636.11	gi|288561158|ref|YP_003424644.1|	-	2.3e-22	79.8	0.4	2.6e-14	53.3	0.0	2.2	2	0	0	2	2	2	2	HIGH	Nucleotidyl	Transferase
CTP_transf_like	PF01467.26	gi|288561158|ref|YP_003424644.1|	-	0.008	16.4	0.0	0.24	11.6	0.0	2.3	2	0	0	2	2	2	1	Cytidylyltransferase-like
HHH_3	PF12836.7	gi|288561158|ref|YP_003424644.1|	-	0.016	15.4	0.1	0.033	14.4	0.1	1.4	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
DUF655	PF04919.12	gi|288561158|ref|YP_003424644.1|	-	0.073	13.0	2.1	0.19	11.6	0.2	2.3	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF655)
EssA	PF10661.9	gi|288561158|ref|YP_003424644.1|	-	0.59	10.0	6.1	7.8	6.3	0.8	2.3	2	0	0	2	2	2	0	WXG100	protein	secretion	system	(Wss),	protein	EssA
RHH_1	PF01402.21	gi|288561159|ref|YP_003424645.1|	-	0.018	15.0	0.3	1.8	8.6	0.0	2.2	2	0	0	2	2	2	0	Ribbon-helix-helix	protein,	copG	family
Amidohydro_1	PF01979.20	gi|288561160|ref|YP_003424646.1|	-	2.1e-26	93.0	0.0	1.2e-25	90.6	0.0	1.9	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.11	gi|288561160|ref|YP_003424646.1|	-	6.1e-10	39.1	0.0	0.00077	19.0	0.0	2.2	2	0	0	2	2	2	2	Amidohydrolase	family
Fer4	PF00037.27	gi|288561161|ref|YP_003424647.1|	-	3.9e-60	197.4	126.4	1.8e-08	33.9	2.7	12.7	13	0	0	13	13	13	10	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|288561161|ref|YP_003424647.1|	-	5e-46	155.1	94.8	5.3e-11	42.9	7.2	8.0	6	1	3	9	9	9	8	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|288561161|ref|YP_003424647.1|	-	9.4e-39	131.4	97.0	1.1e-08	35.1	9.1	8.2	3	1	8	11	11	11	11	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|288561161|ref|YP_003424647.1|	-	1.2e-36	125.5	93.6	0.00031	21.6	0.4	12.2	10	2	2	12	12	12	10	4Fe-4S	double	cluster	binding	domain
Fer4_10	PF13237.6	gi|288561161|ref|YP_003424647.1|	-	7.3e-36	122.1	105.6	4.2e-08	33.2	13.5	8.6	3	2	7	10	10	10	10	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|288561161|ref|YP_003424647.1|	-	1.4e-35	119.9	125.4	1e-06	28.6	3.9	12.2	12	0	0	12	12	12	9	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|288561161|ref|YP_003424647.1|	-	1.9e-31	106.2	114.7	5.5e-06	26.1	2.3	11.8	12	0	0	12	12	12	9	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|288561161|ref|YP_003424647.1|	-	6.9e-30	103.0	98.1	9e-10	38.5	8.7	8.3	5	3	3	8	8	8	8	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|288561161|ref|YP_003424647.1|	-	4.5e-23	79.8	109.7	0.00085	19.6	2.3	11.8	12	0	0	12	12	12	9	4Fe-4S	binding	domain
Fer4_3	PF12798.7	gi|288561161|ref|YP_003424647.1|	-	5.3e-16	58.3	142.9	0.045	14.7	4.3	12.2	12	0	0	12	12	12	10	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|288561161|ref|YP_003424647.1|	-	1.4e-15	57.6	104.8	6.7e-07	29.8	6.2	11.0	6	4	6	12	12	12	10	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|288561161|ref|YP_003424647.1|	-	2.8e-15	56.5	107.2	2.6e-06	27.8	6.4	10.3	4	3	7	11	11	10	8	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|288561161|ref|YP_003424647.1|	-	0.0053	17.5	0.9	0.0053	17.5	0.9	11.8	9	4	0	9	9	9	3	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.6	gi|288561161|ref|YP_003424647.1|	-	0.037	14.6	2.0	0.037	14.6	2.0	11.6	11	1	0	11	11	10	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_18	PF13746.6	gi|288561161|ref|YP_003424647.1|	-	1.4	9.2	104.8	0.57	10.4	3.0	9.8	1	1	4	8	8	8	0	4Fe-4S	dicluster	domain
NiFeSe_Hases	PF00374.19	gi|288561162|ref|YP_003424648.1|	-	1.7e-32	113.0	0.0	1.3e-17	64.0	0.0	3.2	1	1	1	3	3	3	3	Nickel-dependent	hydrogenase
Oxidored_q6	PF01058.22	gi|288561163|ref|YP_003424649.1|	-	6.9e-31	106.8	0.1	1.4e-30	105.8	0.1	1.5	1	0	0	1	1	1	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
FlpD	PF02662.16	gi|288561164|ref|YP_003424650.1|	-	2.8e-55	185.6	0.1	3.1e-55	185.4	0.1	1.0	1	0	0	1	1	1	1	Methyl-viologen-reducing	hydrogenase,	delta	subunit
PIN	PF01850.21	gi|288561165|ref|YP_003424651.1|	-	9.1e-12	45.6	0.4	1.1e-11	45.2	0.4	1.1	1	0	0	1	1	1	1	PIN	domain
DUF1229	PF06797.11	gi|288561165|ref|YP_003424651.1|	-	0.061	13.5	5.8	0.11	12.7	5.3	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1229)
Mac-1	PF09028.10	gi|288561165|ref|YP_003424651.1|	-	0.066	12.3	2.4	0.12	11.4	2.0	1.5	1	1	1	2	2	2	0	Mac	1
PrlF_antitoxin	PF15937.5	gi|288561166|ref|YP_003424652.1|	-	0.035	14.6	0.0	0.046	14.2	0.0	1.3	1	1	0	1	1	1	0	prlF	antitoxin	for	toxin	YhaV_toxin
MazE_antitoxin	PF04014.18	gi|288561166|ref|YP_003424652.1|	-	0.099	12.6	0.3	0.33	10.9	0.3	1.9	1	1	0	1	1	1	0	Antidote-toxin	recognition	MazE,	bacterial	antitoxin
UPF0051	PF01458.17	gi|288561167|ref|YP_003424653.1|	-	1.5e-56	191.5	1.5	2e-56	191.1	1.5	1.2	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
GHL15	PF14885.6	gi|288561167|ref|YP_003424653.1|	-	0.082	12.8	0.0	0.14	12.1	0.0	1.3	1	0	0	1	1	1	0	Hypothetical	glycosyl	hydrolase	family	15
ABC_tran	PF00005.27	gi|288561168|ref|YP_003424654.1|	-	2.3e-22	80.0	0.0	3.1e-22	79.6	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|288561168|ref|YP_003424654.1|	-	1.2e-05	25.3	3.0	0.0021	17.9	0.8	2.2	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_29	PF13555.6	gi|288561168|ref|YP_003424654.1|	-	0.00088	19.0	0.0	0.0017	18.0	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
SMC_N	PF02463.19	gi|288561168|ref|YP_003424654.1|	-	0.0024	17.3	0.1	0.29	10.5	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
RsgA_GTPase	PF03193.16	gi|288561168|ref|YP_003424654.1|	-	0.006	16.5	0.1	0.0094	15.9	0.1	1.3	1	0	0	1	1	1	1	RsgA	GTPase
AAA_23	PF13476.6	gi|288561168|ref|YP_003424654.1|	-	0.036	14.6	1.3	0.074	13.5	1.2	1.8	1	1	0	1	1	1	0	AAA	domain
AAA_27	PF13514.6	gi|288561168|ref|YP_003424654.1|	-	0.042	13.4	0.0	0.072	12.7	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_25	PF13481.6	gi|288561168|ref|YP_003424654.1|	-	0.067	12.8	0.2	0.21	11.2	0.1	1.7	2	0	0	2	2	2	0	AAA	domain
PRC	PF05239.16	gi|288561169|ref|YP_003424655.1|	-	1e-07	31.9	0.1	1.4e-07	31.5	0.1	1.2	1	0	0	1	1	1	1	PRC-barrel	domain
NTP_transf_3	PF12804.7	gi|288561170|ref|YP_003424656.1|	-	7.7e-13	49.1	0.0	1.3e-12	48.4	0.0	1.4	1	1	0	1	1	1	1	MobA-like	NTP	transferase	domain
NTP_transferase	PF00483.23	gi|288561170|ref|YP_003424656.1|	-	2.4e-09	37.2	0.0	2.9e-09	36.9	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
CTP_transf_3	PF02348.19	gi|288561170|ref|YP_003424656.1|	-	9.5e-09	35.5	0.1	6.3e-05	23.0	0.0	2.2	2	0	0	2	2	2	2	Cytidylyltransferase
IspD	PF01128.19	gi|288561170|ref|YP_003424656.1|	-	9.9e-06	25.4	0.0	1.7e-05	24.6	0.0	1.3	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
DUF2114	PF09887.9	gi|288561171|ref|YP_003424657.1|	-	5.1e-217	720.7	4.3	5.9e-217	720.5	4.3	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2114)
MtrH	PF02007.18	gi|288561172|ref|YP_003424658.1|	-	2.6e-134	447.1	0.5	2.9e-134	446.9	0.5	1.0	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase	MtrH	subunit
MtrG	PF04210.13	gi|288561173|ref|YP_003424659.1|	-	4.7e-25	87.2	0.7	5.7e-25	86.9	0.7	1.1	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase,	subunit	G
MtrB	PF05440.12	gi|288561173|ref|YP_003424659.1|	-	2.1	8.8	5.4	45	4.5	5.1	2.2	1	1	0	1	1	1	0	Tetrahydromethanopterin	S-methyltransferase	subunit	B
MtrF	PF09472.10	gi|288561174|ref|YP_003424660.1|	-	1.2e-23	82.2	0.2	1.4e-23	82.1	0.2	1.0	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase,	F	subunit	(MtrF)
MtrA	PF04208.14	gi|288561175|ref|YP_003424661.1|	-	1.5e-86	288.4	2.5	2.6e-86	287.7	2.5	1.3	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase,	subunit	A
MtrF	PF09472.10	gi|288561175|ref|YP_003424661.1|	-	0.1	12.0	1.4	0.26	10.7	0.6	2.0	2	0	0	2	2	2	0	Tetrahydromethanopterin	S-methyltransferase,	F	subunit	(MtrF)
MtrB	PF05440.12	gi|288561176|ref|YP_003424662.1|	-	4.4e-35	120.0	0.1	5.4e-35	119.7	0.1	1.0	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase	subunit	B
MtrC	PF04211.13	gi|288561177|ref|YP_003424663.1|	-	2.3e-106	354.8	32.5	2.7e-106	354.6	32.5	1.0	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase,	subunit	C
MtrD	PF04207.12	gi|288561178|ref|YP_003424664.1|	-	6.3e-98	326.8	32.2	7.5e-98	326.6	32.2	1.0	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase,	subunit	D
MtrE	PF04206.12	gi|288561179|ref|YP_003424665.1|	-	3.1e-125	416.9	15.3	3.6e-125	416.8	15.3	1.0	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase,	subunit	E
MCR_alpha_N	PF02745.15	gi|288561180|ref|YP_003424666.1|	-	5.7e-142	471.9	0.1	7.3e-142	471.5	0.1	1.1	1	0	0	1	1	1	1	Methyl-coenzyme	M	reductase	alpha	subunit,	N-terminal	domain
MCR_alpha	PF02249.17	gi|288561180|ref|YP_003424666.1|	-	3.4e-67	224.7	4.0	7e-67	223.7	4.0	1.6	1	0	0	1	1	1	1	Methyl-coenzyme	M	reductase	alpha	subunit,	C-terminal	domain
MCR_gamma	PF02240.16	gi|288561181|ref|YP_003424667.1|	-	1.7e-130	433.6	1.2	2e-130	433.4	1.2	1.0	1	0	0	1	1	1	1	Methyl-coenzyme	M	reductase	gamma	subunit
Arc_C	PF18162.1	gi|288561181|ref|YP_003424667.1|	-	0.055	13.3	0.0	0.11	12.4	0.0	1.5	1	0	0	1	1	1	0	Arc	C-lobe
MCR_C	PF04609.12	gi|288561182|ref|YP_003424668.1|	-	0.0036	16.4	0.5	0.006	15.7	0.5	1.4	1	1	0	1	1	1	1	Methyl-coenzyme	M	reductase	operon	protein	C
MCR_D	PF02505.14	gi|288561183|ref|YP_003424669.1|	-	1.1e-46	158.2	1.0	1.3e-46	158.0	1.0	1.0	1	0	0	1	1	1	1	Methyl-coenzyme	M	reductase	operon	protein	D
Fucose_iso_N2	PF07882.12	gi|288561183|ref|YP_003424669.1|	-	0.067	12.8	0.0	0.096	12.3	0.0	1.2	1	0	0	1	1	1	0	L-fucose	isomerase,	second	N-terminal	domain
MCR_beta	PF02241.18	gi|288561184|ref|YP_003424670.1|	-	2.6e-133	443.2	6.7	2.6e-133	443.2	6.7	1.4	2	0	0	2	2	2	1	Methyl-coenzyme	M	reductase	beta	subunit,	C-terminal	domain
MCR_beta_N	PF02783.15	gi|288561184|ref|YP_003424670.1|	-	1.7e-83	278.8	1.7	2.7e-83	278.1	1.7	1.3	1	0	0	1	1	1	1	Methyl-coenzyme	M	reductase	beta	subunit,	N-terminal	domain
Radical_SAM	PF04055.21	gi|288561185|ref|YP_003424671.1|	-	6.2e-13	49.5	0.0	2.3e-12	47.6	0.0	1.9	1	1	0	1	1	1	1	Radical	SAM	superfamily
DUF4868	PF16162.5	gi|288561186|ref|YP_003424672.1|	-	4.5	7.2	21.9	29	4.5	21.9	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4868)
MCR_C	PF04609.12	gi|288561187|ref|YP_003424673.1|	-	5.1e-123	409.4	0.3	6e-123	409.2	0.3	1.0	1	0	0	1	1	1	1	Methyl-coenzyme	M	reductase	operon	protein	C
DUF853	PF05872.12	gi|288561188|ref|YP_003424674.1|	-	1.9e-210	699.7	5.3	3.5e-209	695.6	5.3	1.9	1	1	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF853)
DUF87	PF01935.17	gi|288561188|ref|YP_003424674.1|	-	7.1e-11	42.6	1.2	1.4e-10	41.6	0.0	2.0	2	1	0	2	2	2	1	Helicase	HerA,	central	domain
FtsK_SpoIIIE	PF01580.18	gi|288561188|ref|YP_003424674.1|	-	6.2e-07	29.0	0.1	0.0001	21.7	0.0	2.6	2	1	0	2	2	2	1	FtsK/SpoIIIE	family
AAA_10	PF12846.7	gi|288561188|ref|YP_003424674.1|	-	9e-06	24.8	0.4	0.11	11.4	0.0	2.5	3	0	0	3	3	3	2	AAA-like	domain
ResIII	PF04851.15	gi|288561188|ref|YP_003424674.1|	-	3e-05	24.1	0.1	0.0083	16.1	0.1	2.6	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
CbiA	PF01656.23	gi|288561188|ref|YP_003424674.1|	-	0.00022	21.3	0.0	0.00052	20.1	0.0	1.6	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
TrwB_AAD_bind	PF10412.9	gi|288561188|ref|YP_003424674.1|	-	0.00035	19.6	0.2	0.0018	17.3	0.1	2.0	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA_22	PF13401.6	gi|288561188|ref|YP_003424674.1|	-	0.0007	19.9	0.1	0.019	15.3	0.1	2.6	2	0	0	2	2	2	1	AAA	domain
AAA_30	PF13604.6	gi|288561188|ref|YP_003424674.1|	-	0.0017	18.1	0.0	0.005	16.6	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
AAA	PF00004.29	gi|288561188|ref|YP_003424674.1|	-	0.0066	16.9	1.2	0.53	10.7	0.1	3.2	4	0	0	4	4	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_7	PF12775.7	gi|288561188|ref|YP_003424674.1|	-	0.01	15.3	0.0	0.023	14.2	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
AAA_6	PF12774.7	gi|288561188|ref|YP_003424674.1|	-	0.011	14.7	0.1	0.023	13.7	0.1	1.4	1	0	0	1	1	1	0	Hydrolytic	ATP	binding	site	of	dynein	motor	region
T2SSE	PF00437.20	gi|288561188|ref|YP_003424674.1|	-	0.022	13.8	0.1	0.045	12.8	0.1	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
Zot	PF05707.12	gi|288561188|ref|YP_003424674.1|	-	0.027	14.1	0.0	0.078	12.6	0.0	1.7	2	0	0	2	2	2	0	Zonular	occludens	toxin	(Zot)
ATP-synt_ab	PF00006.25	gi|288561188|ref|YP_003424674.1|	-	0.035	13.8	0.0	0.05	13.3	0.0	1.2	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
DUF2075	PF09848.9	gi|288561188|ref|YP_003424674.1|	-	0.047	12.9	4.2	2.4	7.3	0.0	2.5	3	0	0	3	3	3	0	Uncharacterized	conserved	protein	(DUF2075)
DUF815	PF05673.13	gi|288561188|ref|YP_003424674.1|	-	0.069	12.3	0.1	0.13	11.4	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
TMEM65	PF10507.9	gi|288561188|ref|YP_003424674.1|	-	0.074	13.0	0.2	0.16	11.9	0.2	1.5	1	0	0	1	1	1	0	Transmembrane	protein	65
AAA_16	PF13191.6	gi|288561188|ref|YP_003424674.1|	-	0.077	13.4	3.5	0.25	11.7	0.1	3.0	3	1	0	3	3	3	0	AAA	ATPase	domain
AAA_28	PF13521.6	gi|288561188|ref|YP_003424674.1|	-	0.1	12.8	0.2	0.22	11.7	0.2	1.5	1	0	0	1	1	1	0	AAA	domain
TFIIA	PF03153.13	gi|288561188|ref|YP_003424674.1|	-	0.7	9.8	10.8	0.96	9.4	10.8	1.1	1	0	0	1	1	1	0	Transcription	factor	IIA,	alpha/beta	subunit
DUF3484	PF11983.8	gi|288561188|ref|YP_003424674.1|	-	4.3	8.5	13.9	4.7	8.4	5.7	3.3	3	0	0	3	3	3	0	Membrane-attachment	and	polymerisation-promoting	switch
DUF3597	PF12200.8	gi|288561188|ref|YP_003424674.1|	-	5.3	7.6	6.4	14	6.2	6.4	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3597)
Nitroreductase	PF00881.24	gi|288561190|ref|YP_003424676.1|	-	1.3e-19	70.8	0.0	2.4e-19	70.0	0.0	1.4	1	1	0	1	1	1	1	Nitroreductase	family
Fer4	PF00037.27	gi|288561190|ref|YP_003424676.1|	-	2.3e-07	30.4	12.4	0.00067	19.4	2.7	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|288561190|ref|YP_003424676.1|	-	1.3e-06	28.4	10.0	2.1e-06	27.8	10.0	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|288561190|ref|YP_003424676.1|	-	2.6e-06	27.9	11.0	0.00018	22.0	12.9	2.3	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|288561190|ref|YP_003424676.1|	-	9.1e-06	25.7	13.8	2.6e-05	24.2	13.8	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|288561190|ref|YP_003424676.1|	-	9.7e-06	26.4	5.7	0.0039	18.1	0.3	2.5	2	1	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_6	PF12837.7	gi|288561190|ref|YP_003424676.1|	-	1e-05	25.3	12.8	0.0052	16.8	2.2	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|288561190|ref|YP_003424676.1|	-	1.3e-05	25.2	21.0	9.9e-05	22.4	12.7	1.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
TM1586_NiRdase	PF14512.6	gi|288561190|ref|YP_003424676.1|	-	7.1e-05	22.5	0.3	0.018	14.6	0.0	2.4	2	1	1	3	3	3	2	Putative	TM	nitroreductase
Fer4_4	PF12800.7	gi|288561190|ref|YP_003424676.1|	-	0.00027	21.2	12.4	0.024	15.1	0.8	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|288561190|ref|YP_003424676.1|	-	0.00029	21.2	6.3	0.079	13.4	0.0	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|288561190|ref|YP_003424676.1|	-	0.00067	20.2	7.2	0.22	12.1	0.2	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|288561190|ref|YP_003424676.1|	-	0.0024	17.9	13.8	0.037	14.1	4.0	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_15	PF13459.6	gi|288561190|ref|YP_003424676.1|	-	0.026	15.3	5.2	2	9.2	1.0	2.4	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.6	gi|288561190|ref|YP_003424676.1|	-	0.051	13.8	1.3	0.051	13.8	1.3	2.3	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|288561190|ref|YP_003424676.1|	-	0.099	13.2	13.1	0.55	10.8	2.5	2.4	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_3	PF12798.7	gi|288561190|ref|YP_003424676.1|	-	0.24	12.4	14.6	2.7	9.1	3.2	2.2	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_22	PF17179.4	gi|288561190|ref|YP_003424676.1|	-	0.59	11.0	10.1	6.5	7.7	1.5	2.5	2	1	0	2	2	2	0	4Fe-4S	dicluster	domain
GSHPx	PF00255.19	gi|288561191|ref|YP_003424677.1|	-	4.4e-41	138.8	0.6	6.3e-41	138.3	0.6	1.2	1	0	0	1	1	1	1	Glutathione	peroxidase
AhpC-TSA	PF00578.21	gi|288561191|ref|YP_003424677.1|	-	3.8e-05	23.6	0.1	0.00021	21.2	0.1	2.0	2	0	0	2	2	2	1	AhpC/TSA	family
Redoxin	PF08534.10	gi|288561191|ref|YP_003424677.1|	-	0.14	11.9	0.0	5.4	6.7	0.0	2.1	2	0	0	2	2	2	0	Redoxin
Flavodoxin_4	PF12682.7	gi|288561192|ref|YP_003424678.1|	-	1.5e-12	47.5	0.3	5.7e-12	45.6	0.3	1.7	1	1	0	1	1	1	1	Flavodoxin
Flavodoxin_5	PF12724.7	gi|288561192|ref|YP_003424678.1|	-	1.8e-07	31.5	0.0	0.0036	17.6	0.0	2.2	2	0	0	2	2	2	2	Flavodoxin	domain
Flavodoxin_3	PF12641.7	gi|288561192|ref|YP_003424678.1|	-	1.6e-05	24.6	0.0	0.13	11.9	0.0	2.1	2	0	0	2	2	2	2	Flavodoxin	domain
Flavodoxin_1	PF00258.25	gi|288561192|ref|YP_003424678.1|	-	0.029	14.6	0.1	0.47	10.6	0.0	2.2	2	1	0	2	2	2	0	Flavodoxin
LtrA	PF06772.11	gi|288561193|ref|YP_003424679.1|	-	2.4e-45	155.3	31.0	2.9e-45	155.0	31.0	1.0	1	0	0	1	1	1	1	Bacterial	low	temperature	requirement	A	protein	(LtrA)
ArsC	PF03960.15	gi|288561194|ref|YP_003424680.1|	-	3e-11	43.2	0.0	3.4e-11	43.0	0.0	1.2	1	0	0	1	1	1	1	ArsC	family
Glutaredoxin	PF00462.24	gi|288561194|ref|YP_003424680.1|	-	6.4e-07	29.5	0.2	3.5e-06	27.1	0.0	1.9	1	1	1	2	2	2	1	Glutaredoxin
SLATT_6	PF18169.1	gi|288561194|ref|YP_003424680.1|	-	0.12	11.9	0.0	0.2	11.3	0.0	1.3	1	0	0	1	1	1	0	SMODS	and	SLOG-associating	2TM	effector	domain	6
FdhD-NarQ	PF02634.15	gi|288561195|ref|YP_003424681.1|	-	3.8e-60	203.5	0.0	4.6e-60	203.2	0.0	1.1	1	0	0	1	1	1	1	FdhD/NarQ	family
Aminotran_1_2	PF00155.21	gi|288561196|ref|YP_003424682.1|	-	2.9e-32	112.2	0.0	3.6e-32	111.9	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Cys_Met_Meta_PP	PF01053.20	gi|288561196|ref|YP_003424682.1|	-	2.5e-05	23.0	0.0	4.3e-05	22.2	0.0	1.3	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Beta_elim_lyase	PF01212.21	gi|288561196|ref|YP_003424682.1|	-	0.037	13.3	0.0	0.053	12.8	0.0	1.3	1	0	0	1	1	1	0	Beta-eliminating	lyase
Aminotran_5	PF00266.19	gi|288561196|ref|YP_003424682.1|	-	0.24	10.3	0.0	0.38	9.6	0.0	1.2	1	0	0	1	1	1	0	Aminotransferase	class-V
Nitroreductase	PF00881.24	gi|288561197|ref|YP_003424683.1|	-	6.2e-24	85.0	0.0	8.3e-12	45.5	0.0	2.1	1	1	1	2	2	2	2	Nitroreductase	family
TM1586_NiRdase	PF14512.6	gi|288561197|ref|YP_003424683.1|	-	1.4e-08	34.5	0.2	1.3e-07	31.4	0.2	2.6	1	1	0	1	1	1	1	Putative	TM	nitroreductase
PknG_TPR	PF16918.5	gi|288561197|ref|YP_003424683.1|	-	0.16	10.7	0.0	0.21	10.3	0.0	1.1	1	0	0	1	1	1	0	Protein	kinase	G	tetratricopeptide	repeat
Peptidase_M78	PF06114.13	gi|288561199|ref|YP_003424685.1|	-	1.9e-15	56.9	0.0	3e-15	56.2	0.0	1.3	1	0	0	1	1	1	1	IrrE	N-terminal-like	domain
CTV_P13	PF06922.11	gi|288561199|ref|YP_003424685.1|	-	0.09	12.9	0.1	0.14	12.2	0.1	1.3	1	0	0	1	1	1	0	Citrus	tristeza	virus	P13	protein
HTH_3	PF01381.22	gi|288561200|ref|YP_003424686.1|	-	2.6e-17	62.6	0.0	3.7e-17	62.1	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.7	gi|288561200|ref|YP_003424686.1|	-	1.9e-14	53.4	0.3	7.2e-14	51.6	0.2	1.8	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_26	PF13443.6	gi|288561200|ref|YP_003424686.1|	-	1.6e-09	38.1	0.1	2.6e-09	37.4	0.1	1.4	1	1	0	1	1	1	1	Cro/C1-type	HTH	DNA-binding	domain
HTH_31	PF13560.6	gi|288561200|ref|YP_003424686.1|	-	7.9e-09	35.7	0.0	1.4e-08	35.0	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_37	PF13744.6	gi|288561200|ref|YP_003424686.1|	-	6.9e-06	25.9	0.0	1.1e-05	25.3	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_25	PF13413.6	gi|288561200|ref|YP_003424686.1|	-	0.00033	20.5	0.0	0.00054	19.8	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
BetR	PF08667.10	gi|288561200|ref|YP_003424686.1|	-	0.0012	18.9	0.0	0.0014	18.7	0.0	1.2	1	0	0	1	1	1	1	BetR	domain
Sigma70_r4	PF04545.16	gi|288561200|ref|YP_003424686.1|	-	0.015	14.8	0.0	0.025	14.1	0.0	1.3	1	0	0	1	1	1	0	Sigma-70,	region	4
Pou	PF00157.17	gi|288561200|ref|YP_003424686.1|	-	0.021	14.8	0.0	0.043	13.8	0.0	1.6	1	1	0	1	1	1	0	Pou	domain	-	N-terminal	to	homeobox	domain
MqsA_antitoxin	PF15731.5	gi|288561200|ref|YP_003424686.1|	-	0.058	13.5	0.0	0.092	12.9	0.0	1.3	1	0	0	1	1	1	0	Antitoxin	component	of	bacterial	toxin-antitoxin	system,	MqsA
HTH_23	PF13384.6	gi|288561200|ref|YP_003424686.1|	-	0.19	11.6	0.0	0.35	10.7	0.0	1.4	1	0	0	1	1	1	0	Homeodomain-like	domain
SBP_bac_3	PF00497.20	gi|288561201|ref|YP_003424687.1|	-	8.3e-54	182.4	0.3	9.8e-54	182.1	0.3	1.0	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	3
Phosphonate-bd	PF12974.7	gi|288561201|ref|YP_003424687.1|	-	2.9e-07	30.4	0.0	4.5e-07	29.7	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter,	phosphonate,	periplasmic	substrate-binding	protein
NMT1	PF09084.11	gi|288561201|ref|YP_003424687.1|	-	2.6e-06	27.5	0.1	4.3e-05	23.6	0.1	2.0	2	0	0	2	2	2	1	NMT1/THI5	like
DUF3863	PF12979.7	gi|288561201|ref|YP_003424687.1|	-	0.0035	16.3	0.0	0.0042	16.0	0.0	1.2	1	0	0	1	1	1	1	Domain	of	Unknown	Function	with	PDB	structure	(DUF3863)
Phage_TAC_12	PF12363.8	gi|288561201|ref|YP_003424687.1|	-	0.028	14.8	1.0	0.077	13.4	1.0	1.8	1	1	0	1	1	1	0	Phage	tail	assembly	chaperone	protein,	TAC
NMT1_3	PF16868.5	gi|288561201|ref|YP_003424687.1|	-	0.1	12.0	0.1	0.13	11.6	0.1	1.2	1	0	0	1	1	1	0	NMT1-like	family
Bt_P21	PF05560.11	gi|288561201|ref|YP_003424687.1|	-	0.13	11.9	0.4	0.29	10.7	0.3	1.5	2	0	0	2	2	2	0	Bacillus	thuringiensis	P21	molecular	chaperone	protein
DUF308	PF03729.13	gi|288561202|ref|YP_003424688.1|	-	6e-05	23.3	14.8	6e-05	23.3	14.8	3.2	1	1	2	3	3	3	3	Short	repeat	of	unknown	function	(DUF308)
DUF2892	PF11127.8	gi|288561202|ref|YP_003424688.1|	-	0.0011	19.0	5.0	0.0011	19.0	5.0	3.1	2	1	1	3	3	3	1	Protein	of	unknown	function	(DUF2892)
tRNA-synt_2b	PF00587.25	gi|288561203|ref|YP_003424689.1|	-	4.3e-38	131.1	0.0	7.1e-38	130.4	0.0	1.3	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
Seryl_tRNA_N	PF02403.22	gi|288561203|ref|YP_003424689.1|	-	1.6e-23	83.0	3.6	2.9e-23	82.2	3.6	1.4	1	0	0	1	1	1	1	Seryl-tRNA	synthetase	N-terminal	domain
DUF1690	PF07956.11	gi|288561203|ref|YP_003424689.1|	-	0.6	10.5	4.9	0.25	11.8	2.3	1.7	2	0	0	2	2	2	0	Protein	of	Unknown	function	(DUF1690)
ApoA-II	PF04711.13	gi|288561204|ref|YP_003424690.1|	-	0.091	12.9	0.2	0.4	10.9	0.0	2.0	2	0	0	2	2	2	0	Apolipoprotein	A-II	(ApoA-II)
2-ph_phosp	PF04029.14	gi|288561205|ref|YP_003424691.1|	-	1.3e-63	214.2	0.2	1.5e-63	214.0	0.2	1.0	1	0	0	1	1	1	1	2-phosphosulpholactate	phosphatase
TraB	PF01963.17	gi|288561206|ref|YP_003424692.1|	-	2.4e-24	86.7	0.0	3.5e-24	86.1	0.0	1.1	1	0	0	1	1	1	1	TraB	family
Tubulin_C	PF03953.17	gi|288561206|ref|YP_003424692.1|	-	0.0085	16.3	0.1	0.015	15.5	0.1	1.3	1	0	0	1	1	1	1	Tubulin	C-terminal	domain
DUF1922	PF09082.10	gi|288561207|ref|YP_003424693.1|	-	9.3e-36	122.0	3.8	1.2e-35	121.6	3.8	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1922)
Toxin_35	PF10530.9	gi|288561207|ref|YP_003424693.1|	-	0.028	14.4	2.6	0.042	13.8	2.6	1.3	1	0	0	1	1	1	0	Toxin	with	inhibitor	cystine	knot	ICK	or	Knottin	scaffold
GerE	PF00196.19	gi|288561207|ref|YP_003424693.1|	-	0.061	12.9	0.1	0.1	12.2	0.1	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
DUF21	PF01595.20	gi|288561208|ref|YP_003424694.1|	-	1e-45	155.6	1.1	1.6e-45	155.0	1.1	1.2	1	0	0	1	1	1	1	Cyclin	M	transmembrane	N-terminal	domain
CorC_HlyC	PF03471.17	gi|288561208|ref|YP_003424694.1|	-	1.8e-21	75.9	0.5	5.2e-21	74.4	0.5	1.9	1	0	0	1	1	1	1	Transporter	associated	domain
CBS	PF00571.28	gi|288561208|ref|YP_003424694.1|	-	2.4e-07	31.1	1.4	5.6e-06	26.7	0.4	2.8	2	0	0	2	2	2	1	CBS	domain
FtsX	PF02687.21	gi|288561208|ref|YP_003424694.1|	-	8.1	7.0	10.8	3.4	8.2	2.3	2.4	2	0	0	2	2	2	0	FtsX-like	permease	family
Na_Ca_ex	PF01699.24	gi|288561209|ref|YP_003424695.1|	-	8.5e-57	191.4	45.9	1e-29	103.5	16.7	2.0	2	0	0	2	2	2	2	Sodium/calcium	exchanger	protein
DctQ	PF04290.12	gi|288561209|ref|YP_003424695.1|	-	1.1	9.2	16.9	0.22	11.4	0.6	3.7	3	1	0	3	3	3	0	Tripartite	ATP-independent	periplasmic	transporters,	DctQ	component
CbiN	PF02553.15	gi|288561210|ref|YP_003424696.1|	-	0.074	13.0	0.8	2.5	8.2	0.2	2.4	2	0	0	2	2	2	0	Cobalt	transport	protein	component	CbiN
DUF4834	PF16118.5	gi|288561211|ref|YP_003424697.1|	-	0.011	16.6	6.6	0.05	14.6	0.0	3.3	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4834)
HemY_N	PF07219.13	gi|288561211|ref|YP_003424697.1|	-	0.047	13.9	0.8	0.047	13.9	0.8	2.4	2	1	0	2	2	2	0	HemY	protein	N-terminus
Ctr	PF04145.15	gi|288561211|ref|YP_003424697.1|	-	0.08	13.6	1.2	0.21	12.2	1.2	1.7	1	1	0	1	1	1	0	Ctr	copper	transporter	family
Herpes_glycop	PF01528.16	gi|288561211|ref|YP_003424697.1|	-	0.084	11.7	1.0	0.15	10.8	1.0	1.3	1	0	0	1	1	1	0	Herpesvirus	glycoprotein	M
DUF2500	PF10694.9	gi|288561211|ref|YP_003424697.1|	-	0.71	10.4	0.0	0.71	10.4	0.0	2.7	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2500)
ATP_bind_3	PF01171.20	gi|288561212|ref|YP_003424698.1|	-	4.2e-13	49.5	0.0	7.6e-13	48.6	0.0	1.4	1	1	0	1	1	1	1	PP-loop	family
Diphthami_syn_2	PF01902.17	gi|288561212|ref|YP_003424698.1|	-	5.7e-05	22.7	0.1	0.00017	21.2	0.0	1.8	2	0	0	2	2	2	1	Diphthamide	synthase
zn-ribbon_14	PF16503.5	gi|288561212|ref|YP_003424698.1|	-	0.00014	21.3	1.9	0.00014	21.3	1.9	1.6	2	0	0	2	2	2	1	Zinc-ribbon
tRNA_Me_trans	PF03054.16	gi|288561212|ref|YP_003424698.1|	-	0.015	14.1	0.0	0.04	12.7	0.0	1.6	1	1	0	1	1	1	0	tRNA	methyl	transferase
RecR	PF02132.15	gi|288561212|ref|YP_003424698.1|	-	0.029	13.9	1.4	0.073	12.7	1.4	1.6	1	0	0	1	1	1	0	RecR	protein
Glucosamine_iso	PF01182.20	gi|288561212|ref|YP_003424698.1|	-	0.18	11.6	0.0	0.26	11.1	0.0	1.2	1	0	0	1	1	1	0	Glucosamine-6-phosphate	isomerases/6-phosphogluconolactonase
Thiamine_BP	PF01910.17	gi|288561213|ref|YP_003424699.1|	-	3.2e-28	97.5	0.8	3.5e-28	97.3	0.8	1.0	1	0	0	1	1	1	1	Thiamine-binding	protein
adh_short_C2	PF13561.6	gi|288561214|ref|YP_003424700.1|	-	1.1e-36	126.6	0.0	1.2e-36	126.5	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.25	gi|288561214|ref|YP_003424700.1|	-	4.7e-23	81.7	0.0	5.4e-23	81.5	0.0	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
DegT_DnrJ_EryC1	PF01041.17	gi|288561215|ref|YP_003424701.1|	-	9.8e-137	456.1	0.2	1.1e-136	455.9	0.2	1.0	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_1_2	PF00155.21	gi|288561215|ref|YP_003424701.1|	-	2.3e-09	36.9	0.1	3.1e-09	36.5	0.1	1.4	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Cys_Met_Meta_PP	PF01053.20	gi|288561215|ref|YP_003424701.1|	-	4.3e-09	35.4	0.1	7.1e-09	34.7	0.1	1.3	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Beta_elim_lyase	PF01212.21	gi|288561215|ref|YP_003424701.1|	-	4.6e-09	36.0	0.4	9.2e-09	35.0	0.4	1.4	1	1	0	1	1	1	1	Beta-eliminating	lyase
Aminotran_5	PF00266.19	gi|288561215|ref|YP_003424701.1|	-	1.2e-08	34.3	0.2	1.8e-07	30.5	0.1	2.0	2	0	0	2	2	2	1	Aminotransferase	class-V
TRM	PF02005.16	gi|288561216|ref|YP_003424702.1|	-	1.3e-122	409.7	0.0	1.5e-122	409.5	0.0	1.0	1	0	0	1	1	1	1	N2,N2-dimethylguanosine	tRNA	methyltransferase
PrmA	PF06325.13	gi|288561216|ref|YP_003424702.1|	-	0.0018	17.7	0.1	0.0031	16.9	0.1	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Met_10	PF02475.16	gi|288561216|ref|YP_003424702.1|	-	0.0037	17.0	0.1	0.01	15.6	0.2	1.6	1	1	0	1	1	1	1	Met-10+	like-protein
DUF2067	PF09840.9	gi|288561216|ref|YP_003424702.1|	-	0.005	16.4	3.9	0.053	13.1	0.5	2.6	3	0	0	3	3	3	1	Uncharacterized	protein	conserved	in	archaea	(DUF2067)
MTS	PF05175.14	gi|288561216|ref|YP_003424702.1|	-	0.017	14.7	0.0	0.037	13.6	0.0	1.6	2	0	0	2	2	2	0	Methyltransferase	small	domain
Ubie_methyltran	PF01209.18	gi|288561216|ref|YP_003424702.1|	-	0.088	12.1	0.0	0.8	9.0	0.0	2.1	2	0	0	2	2	2	0	ubiE/COQ5	methyltransferase	family
HypA	PF01155.19	gi|288561216|ref|YP_003424702.1|	-	0.11	12.6	0.1	0.31	11.1	0.1	1.7	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
HNH_repeat	PF18780.1	gi|288561216|ref|YP_003424702.1|	-	0.84	9.5	3.7	1.9	8.3	3.7	1.6	1	0	0	1	1	1	0	Homing	endonuclease	repeat
HTH_24	PF13412.6	gi|288561217|ref|YP_003424703.1|	-	7.6e-15	54.2	2.4	8.9e-15	54.0	0.9	1.9	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
AsnC_trans_reg	PF01037.21	gi|288561217|ref|YP_003424703.1|	-	3.9e-13	49.2	0.0	5.7e-13	48.6	0.0	1.3	1	0	0	1	1	1	1	Lrp/AsnC	ligand	binding	domain
HTH_AsnC-type	PF13404.6	gi|288561217|ref|YP_003424703.1|	-	8.9e-13	47.8	0.2	1.4e-12	47.2	0.2	1.4	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_11	PF08279.12	gi|288561217|ref|YP_003424703.1|	-	5.3e-05	23.1	0.1	0.00013	21.8	0.1	1.7	1	0	0	1	1	1	1	HTH	domain
MarR	PF01047.22	gi|288561217|ref|YP_003424703.1|	-	8.1e-05	22.5	0.1	0.00046	20.1	0.0	2.0	2	0	0	2	2	2	1	MarR	family
Sigma70_r4_2	PF08281.12	gi|288561217|ref|YP_003424703.1|	-	0.00027	20.5	0.0	0.00042	19.9	0.0	1.3	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_23	PF13384.6	gi|288561217|ref|YP_003424703.1|	-	0.0017	18.1	0.0	0.0032	17.2	0.0	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
MarR_2	PF12802.7	gi|288561217|ref|YP_003424703.1|	-	0.0032	17.3	0.0	0.0088	15.9	0.0	1.7	2	0	0	2	2	2	1	MarR	family
DUF2250	PF10007.9	gi|288561217|ref|YP_003424703.1|	-	0.011	15.8	0.2	0.65	10.1	0.0	2.2	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_20	PF12840.7	gi|288561217|ref|YP_003424703.1|	-	0.012	15.7	0.0	0.022	14.8	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
DUF4423	PF14394.6	gi|288561217|ref|YP_003424703.1|	-	0.017	14.9	0.0	0.19	11.4	0.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4423)
Trp_repressor	PF01371.19	gi|288561217|ref|YP_003424703.1|	-	0.024	14.7	0.3	0.19	11.8	0.0	2.1	2	0	0	2	2	2	0	Trp	repressor	protein
GYD	PF08734.11	gi|288561217|ref|YP_003424703.1|	-	0.032	14.2	0.0	0.048	13.6	0.0	1.3	1	0	0	1	1	1	0	GYD	domain
HTH_5	PF01022.20	gi|288561217|ref|YP_003424703.1|	-	0.038	13.9	0.0	0.073	13.0	0.0	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
MIase	PF02426.16	gi|288561217|ref|YP_003424703.1|	-	0.042	14.0	0.0	0.066	13.4	0.0	1.3	1	0	0	1	1	1	0	Muconolactone	delta-isomerase
RuvB_C	PF05491.13	gi|288561217|ref|YP_003424703.1|	-	0.043	13.7	0.5	0.2	11.6	0.1	2.0	2	0	0	2	2	2	0	RuvB	C-terminal	winged	helix	domain
Sigma70_r4	PF04545.16	gi|288561217|ref|YP_003424703.1|	-	0.055	13.0	0.0	0.081	12.5	0.0	1.3	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_Tnp_ISL3	PF13542.6	gi|288561217|ref|YP_003424703.1|	-	0.063	12.7	0.0	0.12	11.8	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_Tnp_4	PF13613.6	gi|288561217|ref|YP_003424703.1|	-	0.07	12.9	0.0	0.14	11.9	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	of	DDE	superfamily	endonuclease
GerE	PF00196.19	gi|288561217|ref|YP_003424703.1|	-	0.071	12.7	0.0	0.16	11.6	0.0	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
HTH_Crp_2	PF13545.6	gi|288561217|ref|YP_003424703.1|	-	0.092	12.7	0.1	0.65	10.0	0.0	2.1	2	0	0	2	2	2	0	Crp-like	helix-turn-helix	domain
HTH_41	PF14502.6	gi|288561217|ref|YP_003424703.1|	-	0.12	12.1	0.0	0.23	11.2	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
TrmB	PF01978.19	gi|288561217|ref|YP_003424703.1|	-	0.12	12.2	0.0	0.75	9.7	0.0	2.0	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
RPA_C	PF08784.11	gi|288561217|ref|YP_003424703.1|	-	0.16	12.7	0.8	1.3	9.7	0.2	2.2	2	1	1	3	3	3	0	Replication	protein	A	C	terminal
HTH_28	PF13518.6	gi|288561217|ref|YP_003424703.1|	-	0.18	12.0	0.0	0.29	11.3	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_IclR	PF09339.10	gi|288561217|ref|YP_003424703.1|	-	0.2	11.5	0.0	0.32	10.8	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
GCHY-1	PF02649.14	gi|288561218|ref|YP_003424704.1|	-	3.9e-79	265.8	1.6	4.4e-79	265.6	1.6	1.0	1	0	0	1	1	1	1	Type	I	GTP	cyclohydrolase	folE2
FolB	PF02152.18	gi|288561218|ref|YP_003424704.1|	-	0.013	16.0	0.0	0.034	14.7	0.0	1.7	1	0	0	1	1	1	0	Dihydroneopterin	aldolase
YscJ_FliF_C	PF08345.11	gi|288561218|ref|YP_003424704.1|	-	0.089	13.1	0.1	0.17	12.2	0.1	1.5	1	0	0	1	1	1	0	Flagellar	M-ring	protein	C-terminal
Zn_ribbon_2	PF12674.7	gi|288561219|ref|YP_003424705.1|	-	1.9e-31	108.5	7.4	2.2e-31	108.3	7.4	1.0	1	0	0	1	1	1	1	Putative	zinc	ribbon	domain
Thioredoxin_6	PF13848.6	gi|288561219|ref|YP_003424705.1|	-	0.077	12.9	0.2	0.087	12.7	0.2	1.3	1	1	0	1	1	1	0	Thioredoxin-like	domain
zinc_ribbon_2	PF13240.6	gi|288561219|ref|YP_003424705.1|	-	1.3	8.9	7.3	5.4	6.9	0.2	2.6	3	0	0	3	3	3	0	zinc-ribbon	domain
UDPGT	PF00201.18	gi|288561220|ref|YP_003424706.1|	-	0.0006	18.7	0.0	0.00076	18.4	0.0	1.2	1	0	0	1	1	1	1	UDP-glucoronosyl	and	UDP-glucosyl	transferase
Glyco_tran_28_C	PF04101.16	gi|288561220|ref|YP_003424706.1|	-	0.00093	19.2	0.0	0.0023	17.9	0.0	1.6	2	0	0	2	2	2	1	Glycosyltransferase	family	28	C-terminal	domain
Aconitase_2_N	PF06434.13	gi|288561220|ref|YP_003424706.1|	-	0.066	12.8	0.2	0.14	11.8	0.2	1.4	1	0	0	1	1	1	0	Aconitate	hydratase	2	N-terminus
Radical_SAM	PF04055.21	gi|288561221|ref|YP_003424707.1|	-	1.2e-15	58.3	0.0	2.1e-15	57.5	0.0	1.4	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|288561221|ref|YP_003424707.1|	-	4.4e-12	46.5	0.0	9.9e-12	45.3	0.0	1.7	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|288561221|ref|YP_003424707.1|	-	1.8e-08	34.5	0.0	3.9e-08	33.4	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
HipA_C	PF07804.12	gi|288561221|ref|YP_003424707.1|	-	0.083	12.6	0.3	0.2	11.3	0.3	1.6	1	1	0	1	1	1	0	HipA-like	C-terminal	domain
Thioredoxin_3	PF13192.6	gi|288561222|ref|YP_003424708.1|	-	0.019	15.0	2.4	1.7	8.7	0.2	2.1	1	1	1	2	2	2	0	Thioredoxin	domain
PhnA_Zn_Ribbon	PF08274.12	gi|288561222|ref|YP_003424708.1|	-	0.039	13.9	2.4	0.039	13.9	2.4	2.2	3	0	0	3	3	3	0	PhnA	Zinc-Ribbon
zinc-ribbons_6	PF07191.12	gi|288561222|ref|YP_003424708.1|	-	0.082	12.9	2.9	0.11	12.4	2.9	1.2	1	0	0	1	1	1	0	zinc-ribbons
DUF1768	PF08719.11	gi|288561223|ref|YP_003424709.1|	-	7e-32	110.9	0.1	8.6e-32	110.6	0.1	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1768)
LSM_int_assoc	PF16605.5	gi|288561223|ref|YP_003424709.1|	-	0.16	12.1	0.0	0.33	11.1	0.0	1.5	2	0	0	2	2	2	0	LSM-interacting	associated	unstructured
MFS_1	PF07690.16	gi|288561224|ref|YP_003424710.1|	-	6e-36	124.1	55.3	6e-36	124.1	55.3	2.8	2	1	1	3	3	3	1	Major	Facilitator	Superfamily
MFS_3	PF05977.13	gi|288561224|ref|YP_003424710.1|	-	7.9e-08	31.1	22.5	5.6e-07	28.3	12.0	2.3	2	0	0	2	2	2	2	Transmembrane	secretion	effector
MFS_2	PF13347.6	gi|288561224|ref|YP_003424710.1|	-	8.1e-06	24.7	48.2	0.0012	17.5	23.6	3.0	2	1	1	3	3	3	2	MFS/sugar	transport	protein
OAD_gamma	PF04277.13	gi|288561224|ref|YP_003424710.1|	-	5	7.8	0.0	5	7.8	0.0	5.1	5	0	0	5	5	5	0	Oxaloacetate	decarboxylase,	gamma	chain
ABC1	PF03109.16	gi|288561225|ref|YP_003424711.1|	-	1.9e-35	121.6	0.0	3.9e-35	120.6	0.0	1.5	1	0	0	1	1	1	1	ABC1	family
Pkinase	PF00069.25	gi|288561225|ref|YP_003424711.1|	-	1.2e-05	24.9	0.4	0.023	14.0	0.1	2.3	2	0	0	2	2	2	2	Protein	kinase	domain
APH	PF01636.23	gi|288561225|ref|YP_003424711.1|	-	0.0052	16.7	0.2	0.013	15.4	0.2	1.6	1	0	0	1	1	1	1	Phosphotransferase	enzyme	family
Pkinase_Tyr	PF07714.17	gi|288561225|ref|YP_003424711.1|	-	0.13	11.5	0.0	0.52	9.5	0.0	1.9	2	1	0	2	2	2	0	Protein	tyrosine	kinase
RAMP4	PF06624.12	gi|288561226|ref|YP_003424712.1|	-	0.019	15.0	0.6	0.037	14.1	0.6	1.4	1	0	0	1	1	1	0	Ribosome	associated	membrane	protein	RAMP4
DCX	PF03607.17	gi|288561226|ref|YP_003424712.1|	-	0.097	12.8	0.0	0.18	11.9	0.0	1.4	1	0	0	1	1	1	0	Doublecortin
Big_3_5	PF16640.5	gi|288561227|ref|YP_003424713.1|	-	5.3e-22	77.8	28.2	1.6e-07	31.4	5.9	6.4	6	0	0	6	6	6	6	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|288561227|ref|YP_003424713.1|	-	2.3e-15	56.3	17.5	1.3e-06	28.3	5.5	5.1	5	0	0	5	5	5	3	Bacterial	Ig-like	domain	(group	1)
Invasin_D3	PF09134.10	gi|288561227|ref|YP_003424713.1|	-	2e-09	37.6	29.3	4e-05	23.8	9.9	5.8	5	1	0	6	6	6	3	Invasin,	domain	3
Y_Y_Y	PF07495.13	gi|288561227|ref|YP_003424713.1|	-	0.00022	21.1	6.2	0.012	15.5	0.1	4.6	4	0	0	4	4	4	1	Y_Y_Y	domain
gp45-slide_C	PF09116.10	gi|288561227|ref|YP_003424713.1|	-	0.17	12.0	3.4	0.12	12.4	0.6	2.3	2	0	0	2	2	2	0	gp45	sliding	clamp,	C	terminal
Ribosomal_S30AE	PF02482.19	gi|288561228|ref|YP_003424714.1|	-	0.026	15.3	4.9	0.22	12.4	4.9	2.1	1	1	0	1	1	1	0	Sigma	54	modulation	protein	/	S30EA	ribosomal	protein
DUF4226	PF10774.9	gi|288561228|ref|YP_003424714.1|	-	0.03	14.6	1.0	0.045	14.0	0.4	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4226)
DUF2120	PF09893.9	gi|288561229|ref|YP_003424715.1|	-	7.3e-51	171.8	0.0	8.4e-51	171.6	0.0	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2120)
Radical_SAM	PF04055.21	gi|288561230|ref|YP_003424716.1|	-	9.8e-17	61.8	0.2	1.8e-16	61.0	0.2	1.5	1	0	0	1	1	1	1	Radical	SAM	superfamily
FTH	PF01827.27	gi|288561230|ref|YP_003424716.1|	-	0.082	12.7	1.4	0.55	10.0	0.4	2.5	3	0	0	3	3	3	0	FTH	domain
PDH	PF02153.17	gi|288561231|ref|YP_003424717.1|	-	1.5e-56	191.3	0.7	2.1e-56	190.8	0.7	1.2	1	0	0	1	1	1	1	Prephenate	dehydrogenase
F420_oxidored	PF03807.17	gi|288561231|ref|YP_003424717.1|	-	7.6e-10	39.2	1.0	2e-09	37.9	0.1	2.1	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_2	PF03446.15	gi|288561231|ref|YP_003424717.1|	-	1.2e-06	28.8	0.9	2.6e-05	24.4	0.1	2.4	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
adh_short	PF00106.25	gi|288561231|ref|YP_003424717.1|	-	7.9e-05	22.2	0.0	0.00016	21.2	0.0	1.6	1	0	0	1	1	1	1	short	chain	dehydrogenase
NAD_Gly3P_dh_N	PF01210.23	gi|288561231|ref|YP_003424717.1|	-	0.0038	17.2	0.2	0.015	15.3	0.0	2.1	2	0	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Semialdhyde_dh	PF01118.24	gi|288561231|ref|YP_003424717.1|	-	0.011	16.2	0.0	0.034	14.6	0.0	1.9	2	0	0	2	2	2	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
Herpes_UL14	PF03580.14	gi|288561231|ref|YP_003424717.1|	-	0.049	13.9	0.3	0.091	13.0	0.3	1.5	1	0	0	1	1	1	0	Herpesvirus	UL14-like	protein
NAD_binding_10	PF13460.6	gi|288561231|ref|YP_003424717.1|	-	0.1	12.5	0.1	0.71	9.7	0.0	2.2	2	0	0	2	2	2	0	NAD(P)H-binding
Met_10	PF02475.16	gi|288561232|ref|YP_003424718.1|	-	8.3e-65	218.3	0.2	1e-64	218.0	0.2	1.1	1	0	0	1	1	1	1	Met-10+	like-protein
MTS	PF05175.14	gi|288561232|ref|YP_003424718.1|	-	0.00045	19.8	0.0	0.0007	19.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
PrmA	PF06325.13	gi|288561232|ref|YP_003424718.1|	-	0.002	17.6	0.0	0.0028	17.1	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_18	PF12847.7	gi|288561232|ref|YP_003424718.1|	-	0.0036	17.2	0.0	0.0059	16.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.15	gi|288561232|ref|YP_003424718.1|	-	0.012	15.3	0.0	0.027	14.1	0.0	1.5	2	0	0	2	2	2	0	Conserved	hypothetical	protein	95
Methyltransf_15	PF09445.10	gi|288561232|ref|YP_003424718.1|	-	0.013	15.1	0.0	0.025	14.2	0.0	1.5	1	0	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
TRM	PF02005.16	gi|288561232|ref|YP_003424718.1|	-	0.023	13.9	0.0	0.031	13.4	0.0	1.2	1	0	0	1	1	1	0	N2,N2-dimethylguanosine	tRNA	methyltransferase
tRNA_U5-meth_tr	PF05958.11	gi|288561232|ref|YP_003424718.1|	-	0.037	13.0	0.0	0.064	12.2	0.0	1.3	1	0	0	1	1	1	0	tRNA	(Uracil-5-)-methyltransferase
Methyltransf_25	PF13649.6	gi|288561232|ref|YP_003424718.1|	-	0.054	14.2	0.0	1.1	10.0	0.0	2.3	2	0	0	2	2	2	0	Methyltransferase	domain
GidB	PF02527.15	gi|288561232|ref|YP_003424718.1|	-	0.068	12.5	0.1	2.4	7.5	0.0	2.1	2	0	0	2	2	2	0	rRNA	small	subunit	methyltransferase	G
RrnaAD	PF00398.20	gi|288561232|ref|YP_003424718.1|	-	0.068	12.2	0.0	0.11	11.6	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	RNA	adenine	dimethylase
Proteasome	PF00227.26	gi|288561233|ref|YP_003424719.1|	-	7.5e-55	185.4	2.9	8.6e-55	185.2	2.9	1.0	1	0	0	1	1	1	1	Proteasome	subunit
KH_7	PF17214.3	gi|288561234|ref|YP_003424720.1|	-	2.3e-31	107.6	7.4	1.8e-29	101.5	1.8	3.0	2	0	0	2	2	2	2	KH	domain
Beta-Casp	PF10996.8	gi|288561234|ref|YP_003424720.1|	-	2.8e-24	85.5	0.1	7.8e-24	84.1	0.1	1.8	1	0	0	1	1	1	1	Beta-Casp	domain
Lactamase_B_6	PF16661.5	gi|288561234|ref|YP_003424720.1|	-	1.1e-14	54.3	0.0	2.6e-14	53.1	0.0	1.6	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily	domain
RMMBL	PF07521.12	gi|288561234|ref|YP_003424720.1|	-	5.9e-13	48.5	0.0	1.5e-12	47.2	0.0	1.7	1	0	0	1	1	1	1	Zn-dependent	metallo-hydrolase	RNA	specificity	domain
Lactamase_B	PF00753.27	gi|288561234|ref|YP_003424720.1|	-	9.9e-13	48.5	0.2	5.8e-12	46.0	0.2	2.0	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|288561234|ref|YP_003424720.1|	-	1.1e-11	44.7	0.2	2.4e-11	43.5	0.2	1.6	2	0	0	2	2	2	1	Beta-lactamase	superfamily	domain
KH_2	PF07650.17	gi|288561234|ref|YP_003424720.1|	-	8e-05	22.4	6.2	0.019	14.8	0.6	2.8	1	1	1	2	2	2	2	KH	domain
Lactamase_B_3	PF13483.6	gi|288561234|ref|YP_003424720.1|	-	0.00011	22.2	0.1	0.00052	19.9	0.1	2.2	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
AIRS_C	PF02769.22	gi|288561235|ref|YP_003424721.1|	-	2e-24	86.5	0.2	4.5e-24	85.4	0.0	1.7	2	0	0	2	2	2	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.24	gi|288561235|ref|YP_003424721.1|	-	2.3e-16	60.2	1.2	4.2e-16	59.4	1.2	1.4	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
Sperm_act_pep	PF08250.11	gi|288561235|ref|YP_003424721.1|	-	4.9	7.9	5.7	34	5.3	0.2	3.7	3	0	0	3	3	3	0	Sperm-activating	peptides
Ldh_2	PF02615.14	gi|288561236|ref|YP_003424722.1|	-	3.8e-115	384.6	0.0	4.3e-115	384.4	0.0	1.0	1	0	0	1	1	1	1	Malate/L-lactate	dehydrogenase
DGC	PF08859.11	gi|288561238|ref|YP_003424724.1|	-	1.6e-19	70.0	0.9	1.9e-19	69.7	0.9	1.1	1	0	0	1	1	1	1	DGC	domain
DNA_pol_B_exo1	PF03104.19	gi|288561239|ref|YP_003424725.1|	-	6.4e-44	150.5	1.5	1e-43	149.8	1.5	1.3	1	0	0	1	1	1	1	DNA	polymerase	family	B,	exonuclease	domain
DNA_pol_B	PF00136.21	gi|288561239|ref|YP_003424725.1|	-	1.9e-35	122.5	0.0	2.8e-35	121.9	0.0	1.2	1	0	0	1	1	1	1	DNA	polymerase	family	B
DNA_pol_B_exo2	PF10108.9	gi|288561239|ref|YP_003424725.1|	-	1.4e-09	37.9	0.1	2.7e-09	37.0	0.1	1.4	1	0	0	1	1	1	1	Predicted	3'-5'	exonuclease	related	to	the	exonuclease	domain	of	PolB
RNase_H_2	PF13482.6	gi|288561239|ref|YP_003424725.1|	-	8.7e-08	32.3	1.3	5e-07	29.9	0.1	2.5	3	0	0	3	3	3	1	RNase_H	superfamily
DUF416	PF04222.12	gi|288561239|ref|YP_003424725.1|	-	0.05	13.0	0.3	0.33	10.4	0.1	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF416)
Pox_F12L	PF03337.13	gi|288561239|ref|YP_003424725.1|	-	0.14	10.2	0.0	0.22	9.7	0.0	1.1	1	0	0	1	1	1	0	Poxvirus	F12L	protein
AI-2E_transport	PF01594.16	gi|288561240|ref|YP_003424726.1|	-	7.4e-50	169.9	34.9	8.4e-50	169.8	34.9	1.0	1	0	0	1	1	1	1	AI-2E	family	transporter
DHODB_Fe-S_bind	PF10418.9	gi|288561241|ref|YP_003424727.1|	-	1.4e-11	44.0	4.8	1.4e-11	44.0	4.8	1.9	2	0	0	2	2	2	1	Iron-sulfur	cluster	binding	domain	of	dihydroorotate	dehydrogenase	B
NAD_binding_1	PF00175.21	gi|288561241|ref|YP_003424727.1|	-	3.7e-08	34.0	0.1	7.5e-08	33.0	0.1	1.5	1	0	0	1	1	1	1	Oxidoreductase	NAD-binding	domain
FAD_binding_6	PF00970.24	gi|288561241|ref|YP_003424727.1|	-	0.00012	22.3	0.0	0.0002	21.6	0.0	1.3	1	0	0	1	1	1	1	Oxidoreductase	FAD-binding	domain
NAD_binding_6	PF08030.12	gi|288561241|ref|YP_003424727.1|	-	0.018	15.1	0.0	0.26	11.4	0.0	2.2	2	0	0	2	2	2	0	Ferric	reductase	NAD	binding	domain
DHO_dh	PF01180.21	gi|288561242|ref|YP_003424728.1|	-	4.6e-70	236.2	1.9	5.1e-70	236.0	1.9	1.0	1	0	0	1	1	1	1	Dihydroorotate	dehydrogenase
Dus	PF01207.17	gi|288561242|ref|YP_003424728.1|	-	2.9e-09	36.4	0.1	3e-07	29.8	0.0	2.0	2	0	0	2	2	2	2	Dihydrouridine	synthase	(Dus)
NMO	PF03060.15	gi|288561242|ref|YP_003424728.1|	-	2.3e-07	30.5	2.3	7.3e-07	28.9	1.1	2.0	1	1	1	2	2	2	1	Nitronate	monooxygenase
IMPDH	PF00478.25	gi|288561242|ref|YP_003424728.1|	-	0.0002	20.5	1.2	0.00038	19.6	1.2	1.6	1	1	0	1	1	1	1	IMP	dehydrogenase	/	GMP	reductase	domain
His_biosynth	PF00977.21	gi|288561242|ref|YP_003424728.1|	-	0.00031	20.3	0.0	0.00082	18.9	0.0	1.7	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
FMN_dh	PF01070.18	gi|288561242|ref|YP_003424728.1|	-	0.0022	17.1	0.9	0.0052	15.8	0.7	1.7	2	1	0	2	2	2	1	FMN-dependent	dehydrogenase
DUF561	PF04481.12	gi|288561242|ref|YP_003424728.1|	-	0.045	12.9	0.4	0.12	11.5	0.1	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF561)
G3P_antiterm	PF04309.12	gi|288561242|ref|YP_003424728.1|	-	0.11	11.9	0.1	0.32	10.4	0.0	1.9	3	0	0	3	3	3	0	Glycerol-3-phosphate	responsive	antiterminator
Nop	PF01798.18	gi|288561243|ref|YP_003424729.1|	-	3.9e-62	209.7	0.3	1.1e-61	208.2	0.0	1.9	2	0	0	2	2	2	1	snoRNA	binding	domain,	fibrillarin
KN_motif	PF12075.8	gi|288561243|ref|YP_003424729.1|	-	4.2	7.3	5.6	2.1	8.3	0.2	2.8	2	0	0	2	2	2	0	KN	motif
Fibrillarin	PF01269.17	gi|288561244|ref|YP_003424730.1|	-	1.3e-86	289.4	0.1	1.6e-86	289.1	0.1	1.0	1	0	0	1	1	1	1	Fibrillarin
Methyltransf_25	PF13649.6	gi|288561244|ref|YP_003424730.1|	-	0.0013	19.4	0.0	0.0022	18.7	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Peptidase_C80	PF11713.8	gi|288561244|ref|YP_003424730.1|	-	0.0059	16.9	0.0	0.0096	16.2	0.0	1.3	1	0	0	1	1	1	1	Peptidase	C80	family
FtsJ	PF01728.19	gi|288561244|ref|YP_003424730.1|	-	0.0069	16.5	0.0	0.0084	16.2	0.0	1.2	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
Methyltr_RsmB-F	PF01189.17	gi|288561244|ref|YP_003424730.1|	-	0.0098	15.5	0.0	0.016	14.9	0.0	1.5	1	1	0	1	1	1	1	16S	rRNA	methyltransferase	RsmB/F
DFP	PF04127.15	gi|288561245|ref|YP_003424731.1|	-	4e-49	167.0	0.8	2.9e-48	164.1	0.0	2.1	2	0	0	2	2	2	1	DNA	/	pantothenate	metabolism	flavoprotein
Flavoprotein	PF02441.19	gi|288561245|ref|YP_003424731.1|	-	4.3e-32	111.0	0.3	7.4e-32	110.3	0.3	1.4	1	0	0	1	1	1	1	Flavoprotein
DJ-1_PfpI	PF01965.24	gi|288561245|ref|YP_003424731.1|	-	0.11	12.3	0.2	0.33	10.7	0.1	1.8	2	0	0	2	2	2	0	DJ-1/PfpI	family
NVEALA	PF14055.6	gi|288561246|ref|YP_003424732.1|	-	0.044	13.8	0.2	0.1	12.6	0.2	1.6	1	0	0	1	1	1	0	NVEALA	protein
DUF4330	PF14221.6	gi|288561246|ref|YP_003424732.1|	-	0.051	13.8	0.0	0.086	13.1	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4330)
FeoB_associated	PF12669.7	gi|288561246|ref|YP_003424732.1|	-	0.23	11.9	1.0	0.42	11.0	1.0	1.4	1	0	0	1	1	1	0	FeoB-associated	Cys-rich	membrane	protein
ABC2_membrane_3	PF12698.7	gi|288561247|ref|YP_003424733.1|	-	0.0085	15.2	0.1	0.0085	15.2	0.1	1.7	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
GRP	PF07172.11	gi|288561247|ref|YP_003424733.1|	-	3.9	8.2	26.1	0.49	11.1	21.6	1.9	2	0	0	2	2	2	0	Glycine	rich	protein	family
PDT	PF00800.18	gi|288561248|ref|YP_003424734.1|	-	1.9e-57	194.0	0.2	2.6e-57	193.6	0.2	1.2	1	0	0	1	1	1	1	Prephenate	dehydratase
ACT	PF01842.25	gi|288561248|ref|YP_003424734.1|	-	4.9e-12	45.4	0.0	1.4e-11	44.0	0.0	1.8	2	0	0	2	2	2	1	ACT	domain
SLAM	PF06214.11	gi|288561248|ref|YP_003424734.1|	-	0.091	12.8	0.0	0.15	12.0	0.0	1.4	1	0	0	1	1	1	0	Signaling	lymphocytic	activation	molecule	(SLAM)	protein
CBS	PF00571.28	gi|288561249|ref|YP_003424735.1|	-	1.1e-55	185.9	11.7	3.6e-16	59.4	0.0	4.1	4	0	0	4	4	4	4	CBS	domain
GCV_T_C	PF08669.11	gi|288561249|ref|YP_003424735.1|	-	0.011	15.7	0.0	4.9	7.1	0.0	3.0	3	0	0	3	3	3	0	Glycine	cleavage	T-protein	C-terminal	barrel	domain
Ribosomal_L9_C	PF03948.14	gi|288561249|ref|YP_003424735.1|	-	0.035	14.6	1.0	19	5.8	0.0	3.6	4	0	0	4	4	4	0	Ribosomal	protein	L9,	C-terminal	domain
Peptidase_S32	PF05579.13	gi|288561249|ref|YP_003424735.1|	-	0.051	12.8	0.0	0.11	11.7	0.0	1.6	1	1	0	1	1	1	0	Equine	arteritis	virus	serine	endopeptidase	S32
CttA_N	PF18244.1	gi|288561249|ref|YP_003424735.1|	-	0.055	13.9	0.2	0.99	9.9	0.0	2.6	2	1	0	2	2	2	0	Cellulose-binding	protein	CttA	N-terminal	domain
CBS	PF00571.28	gi|288561250|ref|YP_003424736.1|	-	5.2e-59	196.5	9.8	6.3e-15	55.4	0.1	4.1	4	0	0	4	4	4	4	CBS	domain
MreC	PF04085.14	gi|288561250|ref|YP_003424736.1|	-	0.7	9.8	4.8	49	3.8	0.1	3.4	3	0	0	3	3	3	0	rod	shape-determining	protein	MreC
Big_3_5	PF16640.5	gi|288561252|ref|YP_003424738.1|	-	9.2e-73	240.5	73.5	4e-10	39.7	0.2	15.3	15	1	1	16	16	16	13	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|288561252|ref|YP_003424738.1|	-	8.3e-16	57.8	52.5	3.2e-09	36.7	3.7	11.6	14	1	0	14	14	14	6	Bacterial	Ig-like	domain	(group	1)
CarboxypepD_reg	PF13620.6	gi|288561252|ref|YP_003424738.1|	-	1.7e-14	53.9	33.1	0.019	15.2	1.5	11.6	11	1	0	12	12	12	6	Carboxypeptidase	regulatory-like	domain
MG4	PF17789.1	gi|288561252|ref|YP_003424738.1|	-	5.3e-12	45.7	11.0	0.065	13.4	0.0	8.2	9	0	0	9	9	9	4	Macroglobulin	domain	MG4
Invasin_D3	PF09134.10	gi|288561252|ref|YP_003424738.1|	-	1.1e-09	38.5	49.6	5.1e-06	26.7	5.8	11.1	11	0	0	11	11	11	4	Invasin,	domain	3
DUF824	PF05688.11	gi|288561252|ref|YP_003424738.1|	-	0.0039	17.0	0.1	25	4.8	0.0	4.8	4	0	0	4	4	4	0	Salmonella	repeat	of	unknown	function	(DUF824)
ig	PF00047.25	gi|288561252|ref|YP_003424738.1|	-	0.025	14.8	0.3	0.076	13.2	0.3	1.8	1	0	0	1	1	1	0	Immunoglobulin	domain
BOF	PF04076.13	gi|288561252|ref|YP_003424738.1|	-	0.67	10.0	8.8	31	4.7	0.1	5.6	5	0	0	5	5	5	0	Bacterial	OB	fold	(BOF)	protein
Pilin	PF00114.19	gi|288561252|ref|YP_003424738.1|	-	2.9	8.8	15.7	0.05	14.5	1.1	4.8	5	0	0	5	5	5	0	Pilin	(bacterial	filament)
DUF3915	PF13054.6	gi|288561252|ref|YP_003424738.1|	-	9.1	6.3	11.7	2.4	8.1	0.0	4.2	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF3915)
Cas_Cas4	PF01930.17	gi|288561253|ref|YP_003424739.1|	-	5.2e-13	49.4	4.7	7.2e-12	45.7	0.0	2.8	1	1	0	2	2	2	1	Domain	of	unknown	function	DUF83
PDDEXK_1	PF12705.7	gi|288561253|ref|YP_003424739.1|	-	7.2e-09	35.9	0.2	7.7e-08	32.5	0.2	2.1	1	1	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
DUF5612	PF18462.1	gi|288561254|ref|YP_003424740.1|	-	1.6e-73	245.2	6.3	2.3e-73	244.7	6.3	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF5612)
ACT_4	PF13291.6	gi|288561254|ref|YP_003424740.1|	-	9.1e-08	32.6	0.9	2.4e-07	31.2	0.9	1.7	1	0	0	1	1	1	1	ACT	domain
ACT	PF01842.25	gi|288561254|ref|YP_003424740.1|	-	1.8e-05	24.4	0.5	0.00028	20.6	0.1	2.6	2	0	0	2	2	2	1	ACT	domain
DUF3798	PF12683.7	gi|288561254|ref|YP_003424740.1|	-	0.0076	15.7	1.0	0.018	14.5	0.5	1.9	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF3798)
SIS	PF01380.22	gi|288561254|ref|YP_003424740.1|	-	0.043	13.7	0.1	0.11	12.3	0.1	1.7	1	0	0	1	1	1	0	SIS	domain
ACT_5	PF13710.6	gi|288561254|ref|YP_003424740.1|	-	0.058	13.2	0.0	0.15	11.9	0.0	1.7	1	0	0	1	1	1	0	ACT	domain
DUF4162	PF13732.6	gi|288561254|ref|YP_003424740.1|	-	0.28	11.9	2.0	0.54	11.0	0.6	2.2	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4162)
Ehbp	PF10622.9	gi|288561255|ref|YP_003424741.1|	-	2.9e-40	136.2	0.2	3.3e-40	136.0	0.2	1.0	1	0	0	1	1	1	1	Energy-converting	hydrogenase	B	subunit	P	(EhbP)
NADHdh	PF00146.21	gi|288561256|ref|YP_003424742.1|	-	7.6e-24	84.5	26.6	1.7e-12	47.3	12.8	2.2	2	0	0	2	2	2	2	NADH	dehydrogenase
Complex1_49kDa	PF00346.19	gi|288561257|ref|YP_003424743.1|	-	5.8e-42	143.7	1.3	1.8e-36	125.7	0.7	2.1	1	1	1	2	2	2	2	Respiratory-chain	NADH	dehydrogenase,	49	Kd	subunit
NiFeSe_Hases	PF00374.19	gi|288561257|ref|YP_003424743.1|	-	9e-20	71.0	0.1	6.8e-15	54.9	0.1	3.0	3	0	0	3	3	3	2	Nickel-dependent	hydrogenase
Oxidored_q6	PF01058.22	gi|288561258|ref|YP_003424744.1|	-	4e-26	91.4	0.5	4.9e-26	91.1	0.5	1.1	1	0	0	1	1	1	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
Fer4	PF00037.27	gi|288561259|ref|YP_003424745.1|	-	2.1e-10	40.0	15.2	1.1e-07	31.3	4.9	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|288561259|ref|YP_003424745.1|	-	4.2e-09	36.9	8.0	7.2e-09	36.1	8.0	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|288561259|ref|YP_003424745.1|	-	2.9e-08	33.8	17.2	1e-05	25.6	8.2	1.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|288561259|ref|YP_003424745.1|	-	1.2e-07	31.7	6.9	3.9e-05	23.7	1.2	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|288561259|ref|YP_003424745.1|	-	1.6e-07	31.4	8.9	1.1e-05	25.5	10.7	2.3	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|288561259|ref|YP_003424745.1|	-	2e-06	27.6	11.9	2.8e-06	27.1	3.9	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|288561259|ref|YP_003424745.1|	-	3e-06	27.6	5.5	1e-05	25.8	5.8	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|288561259|ref|YP_003424745.1|	-	2.8e-05	24.9	2.8	0.001	19.9	0.1	2.5	3	0	0	3	3	2	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|288561259|ref|YP_003424745.1|	-	0.00014	21.8	3.6	0.00014	21.8	3.6	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|288561259|ref|YP_003424745.1|	-	0.00043	21.2	9.7	0.00043	21.2	9.7	2.5	2	1	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.7	gi|288561259|ref|YP_003424745.1|	-	0.0011	19.2	11.8	0.011	16.1	3.9	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|288561259|ref|YP_003424745.1|	-	0.0015	19.1	8.0	0.03	14.9	1.4	2.2	1	1	2	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|288561259|ref|YP_003424745.1|	-	0.0039	17.7	8.5	0.027	15.0	2.9	2.6	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_15	PF13459.6	gi|288561259|ref|YP_003424745.1|	-	0.0084	16.8	5.4	0.025	15.3	0.4	2.9	3	0	0	3	3	3	1	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.6	gi|288561259|ref|YP_003424745.1|	-	0.0098	16.1	0.8	0.0098	16.1	0.8	2.5	2	1	1	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|288561259|ref|YP_003424745.1|	-	0.072	14.1	7.3	0.072	14.1	7.3	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4	PF00037.27	gi|288561260|ref|YP_003424746.1|	-	5.9e-53	174.7	130.1	1.9e-07	30.6	2.3	13.4	13	0	0	13	13	13	12	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|288561260|ref|YP_003424746.1|	-	9.6e-38	128.6	108.0	3.7e-09	37.0	6.5	9.1	8	2	1	9	9	9	9	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|288561260|ref|YP_003424746.1|	-	1.9e-31	108.0	106.9	2.8e-07	30.6	10.2	9.7	8	3	1	9	9	9	9	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|288561260|ref|YP_003424746.1|	-	7.4e-29	98.6	137.7	0.00018	21.4	3.2	13.3	13	0	0	13	13	13	11	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|288561260|ref|YP_003424746.1|	-	9.6e-29	100.1	103.4	0.0016	19.3	0.8	12.7	10	3	5	15	15	15	13	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.6	gi|288561260|ref|YP_003424746.1|	-	8.7e-27	93.0	105.7	8.9e-08	32.2	7.4	9.7	7	3	3	10	10	10	6	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|288561260|ref|YP_003424746.1|	-	1.7e-22	78.0	129.7	0.00017	21.5	2.9	13.4	13	0	0	13	13	13	10	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|288561260|ref|YP_003424746.1|	-	5.9e-21	74.3	126.6	0.00015	21.8	13.2	11.2	3	3	10	13	13	13	12	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|288561260|ref|YP_003424746.1|	-	1.5e-19	70.3	107.4	6.2e-07	29.9	8.0	11.5	8	3	4	12	12	12	11	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|288561260|ref|YP_003424746.1|	-	7e-19	68.0	106.9	0.00013	22.4	8.4	11.3	7	1	7	14	14	13	12	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|288561260|ref|YP_003424746.1|	-	8.6e-07	29.4	110.2	0.006	17.1	1.3	13.7	13	1	0	13	13	13	8	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_4	PF12800.7	gi|288561260|ref|YP_003424746.1|	-	3e-06	27.3	131.9	0.03	14.8	4.6	13.5	12	1	1	13	13	13	7	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|288561260|ref|YP_003424746.1|	-	0.051	13.8	107.7	0.15	12.2	0.5	9.4	2	2	7	9	9	9	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|288561260|ref|YP_003424746.1|	-	2.5	9.2	147.2	0.081	13.9	3.5	13.5	13	0	0	13	13	13	0	4Fe-4S	binding	domain
Acyl_transf_3	PF01757.22	gi|288561261|ref|YP_003424747.1|	-	0.059	12.4	4.7	0.066	12.3	4.7	1.0	1	0	0	1	1	1	0	Acyltransferase	family
BCLP	PF12304.8	gi|288561261|ref|YP_003424747.1|	-	0.15	11.5	0.3	0.16	11.5	0.3	1.1	1	0	0	1	1	1	0	Beta-casein	like	protein
DUF2929	PF11151.8	gi|288561261|ref|YP_003424747.1|	-	0.24	11.7	8.7	1.5	9.2	4.8	3.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2929)
DUF4191	PF13829.6	gi|288561261|ref|YP_003424747.1|	-	1	8.7	2.8	1.4	8.2	0.1	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4191)
Insulin_TMD	PF17870.1	gi|288561261|ref|YP_003424747.1|	-	1.8	8.7	6.6	5.9	7.0	2.1	2.3	2	0	0	2	2	2	0	Insulin	receptor	trans-membrane	segment
MnhB	PF04039.13	gi|288561262|ref|YP_003424748.1|	-	1.8e-19	70.3	15.9	2.3e-19	69.9	15.9	1.1	1	0	0	1	1	1	1	Domain	related	to	MnhB	subunit	of	Na+/H+	antiporter
Far-17a_AIG1	PF04750.14	gi|288561264|ref|YP_003424750.1|	-	2.3e-05	23.8	0.2	4.5e-05	22.9	0.2	1.5	1	1	0	1	1	1	1	FAR-17a/AIG1-like	protein
PRA1	PF03208.19	gi|288561264|ref|YP_003424750.1|	-	0.064	12.9	6.5	0.091	12.4	6.5	1.1	1	0	0	1	1	1	0	PRA1	family	protein
DUF2545	PF10810.8	gi|288561264|ref|YP_003424750.1|	-	0.14	12.3	1.2	0.14	12.3	1.2	2.8	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2545)
CBP_BcsF	PF11120.8	gi|288561264|ref|YP_003424750.1|	-	0.28	11.3	0.0	0.28	11.3	0.0	2.4	1	1	2	3	3	3	0	Cellulose	biosynthesis	protein	BcsF
DUF872	PF05915.12	gi|288561264|ref|YP_003424750.1|	-	0.29	11.3	2.7	3	8.1	0.0	2.2	1	1	1	2	2	2	0	Eukaryotic	protein	of	unknown	function	(DUF872)
DUF3671	PF12420.8	gi|288561264|ref|YP_003424750.1|	-	0.79	9.8	8.2	3.2	7.8	8.2	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function
SUR7	PF06687.12	gi|288561264|ref|YP_003424750.1|	-	0.82	9.3	6.4	1.4	8.5	6.4	1.4	1	1	0	1	1	1	0	SUR7/PalI	family
DUF3810	PF12725.7	gi|288561264|ref|YP_003424750.1|	-	2.5	7.3	6.4	2.9	7.1	4.6	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3810)
DUF2207	PF09972.9	gi|288561264|ref|YP_003424750.1|	-	3.1	6.4	9.4	0.22	10.2	1.5	1.9	1	1	1	2	2	2	0	Predicted	membrane	protein	(DUF2207)
Proton_antipo_M	PF00361.20	gi|288561265|ref|YP_003424751.1|	-	1.1e-32	113.5	26.1	1.1e-32	113.5	26.1	1.8	2	0	0	2	2	2	1	Proton-conducting	membrane	transporter
NADHdeh_related	PF10125.9	gi|288561265|ref|YP_003424751.1|	-	7e-06	25.6	7.1	7e-06	25.6	7.1	3.3	1	1	2	3	3	3	1	NADH	dehydrogenase	I,	subunit	N	related	protein
Oxidored_q2	PF00420.24	gi|288561266|ref|YP_003424752.1|	-	2.6e-28	97.7	4.0	3.1e-28	97.5	4.0	1.0	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
DUF2108	PF09881.9	gi|288561266|ref|YP_003424752.1|	-	0.00029	20.7	5.5	0.00029	20.7	5.5	1.8	2	0	0	2	2	2	1	Predicted	membrane	protein	(DUF2108)
DUF347	PF03988.12	gi|288561266|ref|YP_003424752.1|	-	0.23	11.7	5.2	2.9	8.1	0.4	2.5	2	0	0	2	2	2	0	Repeat	of	Unknown	Function	(DUF347)
DUF4040	PF13244.6	gi|288561267|ref|YP_003424753.1|	-	6.2e-18	64.7	7.9	7.3e-18	64.5	7.9	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4040)
Keratin_assoc	PF09775.9	gi|288561267|ref|YP_003424753.1|	-	0.036	13.7	1.6	0.042	13.5	1.6	1.2	1	0	0	1	1	1	0	Keratinocyte-associated	protein	2
DUF2109	PF09882.9	gi|288561267|ref|YP_003424753.1|	-	0.15	12.1	7.4	0.17	11.9	7.1	1.3	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2109)
DUF2070	PF09843.9	gi|288561267|ref|YP_003424753.1|	-	0.28	9.4	9.2	0.32	9.2	9.2	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
SPC12	PF06645.13	gi|288561267|ref|YP_003424753.1|	-	1.5	9.0	7.4	0.12	12.5	3.0	1.5	2	0	0	2	2	2	0	Microsomal	signal	peptidase	12	kDa	subunit	(SPC12)
PhaG_MnhG_YufB	PF03334.14	gi|288561268|ref|YP_003424754.1|	-	0.00023	21.3	8.8	0.00095	19.4	8.8	1.9	1	1	0	1	1	1	1	Na+/H+	antiporter	subunit
7TM_GPCR_Sra	PF02117.16	gi|288561268|ref|YP_003424754.1|	-	0.025	13.4	0.2	0.033	13.0	0.2	1.1	1	0	0	1	1	1	0	Serpentine	type	7TM	GPCR	chemoreceptor	Sra
CBP_BcsF	PF11120.8	gi|288561268|ref|YP_003424754.1|	-	1.7	8.8	8.0	5.4	7.2	0.2	2.3	2	0	0	2	2	2	0	Cellulose	biosynthesis	protein	BcsF
MrpF_PhaF	PF04066.13	gi|288561269|ref|YP_003424755.1|	-	2.6e-09	37.3	7.6	2.6e-09	37.3	7.6	2.1	1	1	2	3	3	3	1	Multiple	resistance	and	pH	regulation	protein	F	(MrpF	/	PhaF)
Polysacc_synt_C	PF14667.6	gi|288561269|ref|YP_003424755.1|	-	0.08	13.0	13.7	0.089	12.9	13.7	1.1	1	0	0	1	1	1	0	Polysaccharide	biosynthesis	C-terminal	domain
MNHE	PF01899.16	gi|288561270|ref|YP_003424756.1|	-	4.2e-21	75.2	0.2	4.5e-21	75.1	0.2	1.0	1	0	0	1	1	1	1	Na+/H+	ion	antiporter	subunit
YdjM	PF04307.14	gi|288561271|ref|YP_003424757.1|	-	3.2e-17	62.4	16.1	2.5e-09	36.7	5.2	2.4	2	1	0	2	2	2	2	LexA-binding,	inner	membrane-associated	putative	hydrolase
TctB	PF07331.11	gi|288561271|ref|YP_003424757.1|	-	0.0019	18.5	9.8	0.0019	18.5	9.8	2.7	2	1	0	2	2	2	1	Tripartite	tricarboxylate	transporter	TctB	family
ARL6IP6	PF15062.6	gi|288561271|ref|YP_003424757.1|	-	0.086	13.0	0.4	0.086	13.0	0.4	3.4	2	2	1	4	4	4	0	Haemopoietic	lineage	transmembrane	helix
DUF4407	PF14362.6	gi|288561271|ref|YP_003424757.1|	-	0.73	9.1	7.5	1.1	8.5	6.1	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4407)
AstE_AspA	PF04952.14	gi|288561272|ref|YP_003424758.1|	-	2.3e-14	53.2	0.0	5.4e-14	52.0	0.0	1.7	1	1	0	1	1	1	1	Succinylglutamate	desuccinylase	/	Aspartoacylase	family
DUF2119	PF09892.9	gi|288561272|ref|YP_003424758.1|	-	0.11	11.8	0.0	0.18	11.2	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2119)
Peptidase_M14	PF00246.24	gi|288561272|ref|YP_003424758.1|	-	0.12	12.1	0.0	0.22	11.3	0.0	1.4	1	0	0	1	1	1	0	Zinc	carboxypeptidase
Arginosuc_synth	PF00764.19	gi|288561273|ref|YP_003424759.1|	-	3.7e-160	533.5	1.3	4.2e-160	533.3	1.3	1.0	1	0	0	1	1	1	1	Arginosuccinate	synthase
QueC	PF06508.13	gi|288561273|ref|YP_003424759.1|	-	1.1e-06	28.4	0.1	2.5e-06	27.1	0.1	1.7	1	1	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
ATP_bind_3	PF01171.20	gi|288561273|ref|YP_003424759.1|	-	0.049	13.4	0.0	0.16	11.7	0.0	1.9	2	1	0	2	2	2	0	PP-loop	family
tRNA_Me_trans	PF03054.16	gi|288561273|ref|YP_003424759.1|	-	0.056	12.2	0.0	0.092	11.5	0.0	1.3	1	0	0	1	1	1	0	tRNA	methyl	transferase
Asn_synthase	PF00733.21	gi|288561273|ref|YP_003424759.1|	-	0.069	12.8	0.0	0.13	11.9	0.0	1.4	1	0	0	1	1	1	0	Asparagine	synthase
SfsA	PF03749.13	gi|288561274|ref|YP_003424760.1|	-	1.7e-43	147.8	0.0	2.3e-43	147.4	0.0	1.2	1	0	0	1	1	1	1	Sugar	fermentation	stimulation	protein	RE	domain
SfsA_N	PF17746.1	gi|288561274|ref|YP_003424760.1|	-	1.6e-13	50.6	0.1	4e-13	49.3	0.0	1.7	2	0	0	2	2	2	1	SfsA	N-terminal	OB	domain
Carb_kinase	PF01256.17	gi|288561275|ref|YP_003424761.1|	-	7.1e-49	166.5	0.0	1.1e-48	165.9	0.0	1.2	1	0	0	1	1	1	1	Carbohydrate	kinase
YjeF_N	PF03853.15	gi|288561275|ref|YP_003424761.1|	-	5.6e-41	140.3	0.0	1.1e-40	139.3	0.0	1.5	1	0	0	1	1	1	1	YjeF-related	protein	N-terminus
WG_beta_rep	PF14903.6	gi|288561275|ref|YP_003424761.1|	-	0.066	13.5	2.8	1.4	9.3	0.2	3.5	3	0	0	3	3	3	0	WG	containing	repeat
HK	PF02110.15	gi|288561275|ref|YP_003424761.1|	-	0.072	12.5	0.2	0.36	10.2	0.2	2.0	1	1	0	1	1	1	0	Hydroxyethylthiazole	kinase	family
TrkA_N	PF02254.18	gi|288561276|ref|YP_003424762.1|	-	1.7e-30	105.6	0.9	3.5e-30	104.6	0.4	1.8	2	0	0	2	2	2	1	TrkA-N	domain
3H	PF02829.14	gi|288561276|ref|YP_003424762.1|	-	2.3e-19	69.5	6.1	4.1e-18	65.5	2.2	3.2	3	0	0	3	3	3	1	3H	domain
Ion_trans_2	PF07885.16	gi|288561276|ref|YP_003424762.1|	-	6.8e-14	51.6	12.0	1.2e-13	50.8	12.0	1.4	1	0	0	1	1	1	1	Ion	channel
NAD_binding_10	PF13460.6	gi|288561276|ref|YP_003424762.1|	-	2.5e-05	24.2	0.1	4.3e-05	23.5	0.1	1.4	1	0	0	1	1	1	1	NAD(P)H-binding
F420_oxidored	PF03807.17	gi|288561276|ref|YP_003424762.1|	-	2.8e-05	24.6	0.2	0.0061	17.1	0.0	3.1	2	1	1	3	3	3	1	NADP	oxidoreductase	coenzyme	F420-dependent
Sacchrp_dh_NADP	PF03435.18	gi|288561276|ref|YP_003424762.1|	-	0.00012	22.3	0.0	0.00027	21.2	0.0	1.7	1	0	0	1	1	1	1	Saccharopine	dehydrogenase	NADP	binding	domain
Ion_trans	PF00520.31	gi|288561276|ref|YP_003424762.1|	-	0.00029	20.1	9.5	0.0018	17.5	9.7	1.9	1	1	1	2	2	2	1	Ion	transport	protein
NAD_binding_2	PF03446.15	gi|288561276|ref|YP_003424762.1|	-	0.00068	19.8	0.1	0.005	17.0	0.1	2.1	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_binding_7	PF13241.6	gi|288561276|ref|YP_003424762.1|	-	0.036	14.5	0.6	0.1	13.0	0.3	1.8	1	1	1	2	2	2	0	Putative	NAD(P)-binding
OppC_N	PF12911.7	gi|288561276|ref|YP_003424762.1|	-	0.11	12.5	0.8	0.47	10.5	0.1	2.1	2	0	0	2	2	2	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
Transglut_core	PF01841.19	gi|288561277|ref|YP_003424763.1|	-	4.2e-14	52.9	0.0	5.5e-14	52.6	0.0	1.1	1	0	0	1	1	1	1	Transglutaminase-like	superfamily
CSF-1	PF05337.11	gi|288561277|ref|YP_003424763.1|	-	0.0031	17.6	0.4	0.07	13.2	0.0	2.2	2	0	0	2	2	2	1	Macrophage	colony	stimulating	factor-1	(CSF-1)
DUF553	PF04473.12	gi|288561277|ref|YP_003424763.1|	-	0.01	15.4	0.0	0.014	15.0	0.0	1.2	1	0	0	1	1	1	0	Transglutaminase-like	domain
B3R	PF17057.5	gi|288561277|ref|YP_003424763.1|	-	0.076	13.2	0.6	0.21	11.8	0.1	1.9	2	1	1	3	3	3	0	Poxviridae	B3	protein
FTR_C	PF02741.15	gi|288561278|ref|YP_003424764.1|	-	9.4e-63	210.7	1.0	1.6e-62	209.9	1.0	1.4	1	0	0	1	1	1	1	FTR,	proximal	lobe
FTR	PF01913.18	gi|288561278|ref|YP_003424764.1|	-	1e-59	200.5	0.2	2.3e-59	199.4	0.2	1.6	1	0	0	1	1	1	1	Formylmethanofuran-tetrahydromethanopterin	formyltransferase
LPG_synthase_TM	PF03706.13	gi|288561279|ref|YP_003424765.1|	-	8.2e-52	176.6	31.3	1.1e-51	176.2	31.3	1.0	1	0	0	1	1	1	1	Lysylphosphatidylglycerol	synthase	TM	region
TrkH	PF02386.16	gi|288561280|ref|YP_003424766.1|	-	5.2e-49	167.0	26.0	5.9e-25	87.7	6.7	2.1	1	1	1	2	2	2	2	Cation	transport	protein
TrkA_N	PF02254.18	gi|288561281|ref|YP_003424767.1|	-	4.3e-34	117.3	1.4	4.6e-34	117.2	0.6	1.5	2	0	0	2	2	1	1	TrkA-N	domain
TrkA_C	PF02080.21	gi|288561281|ref|YP_003424767.1|	-	9e-07	28.6	0.1	4.2e-06	26.5	0.0	2.2	3	0	0	3	3	3	1	TrkA-C	domain
NAD_binding_7	PF13241.6	gi|288561281|ref|YP_003424767.1|	-	6.8e-06	26.5	0.1	1.5e-05	25.4	0.0	1.6	2	0	0	2	2	2	1	Putative	NAD(P)-binding
Pyr_redox	PF00070.27	gi|288561281|ref|YP_003424767.1|	-	1.6e-05	25.4	0.1	3e-05	24.5	0.1	1.6	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.14	gi|288561281|ref|YP_003424767.1|	-	0.0001	21.7	0.1	0.0002	20.7	0.1	1.5	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
F420_oxidored	PF03807.17	gi|288561281|ref|YP_003424767.1|	-	0.00011	22.8	0.2	0.0004	20.9	0.1	2.1	2	2	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
DAO	PF01266.24	gi|288561281|ref|YP_003424767.1|	-	0.00045	19.9	0.0	0.00052	19.7	0.0	1.3	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
AlaDh_PNT_C	PF01262.21	gi|288561281|ref|YP_003424767.1|	-	0.0012	18.1	0.0	0.0021	17.4	0.0	1.3	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
AdoHcyase_NAD	PF00670.21	gi|288561281|ref|YP_003424767.1|	-	0.0015	18.7	0.4	0.0026	17.8	0.4	1.4	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
3HCDH_N	PF02737.18	gi|288561281|ref|YP_003424767.1|	-	0.002	18.1	0.0	0.003	17.4	0.0	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_8	PF13450.6	gi|288561281|ref|YP_003424767.1|	-	0.0027	17.9	0.0	0.0047	17.1	0.0	1.4	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
ApbA	PF02558.16	gi|288561281|ref|YP_003424767.1|	-	0.0042	16.8	0.0	0.047	13.3	0.0	2.2	2	0	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
FAD_binding_3	PF01494.19	gi|288561281|ref|YP_003424767.1|	-	0.0058	15.9	0.0	0.0091	15.3	0.0	1.3	1	0	0	1	1	1	1	FAD	binding	domain
NAD_binding_2	PF03446.15	gi|288561281|ref|YP_003424767.1|	-	0.011	15.9	0.0	0.019	15.2	0.0	1.4	1	0	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_binding_10	PF13460.6	gi|288561281|ref|YP_003424767.1|	-	0.011	15.6	0.0	0.028	14.3	0.0	1.9	1	1	0	1	1	1	0	NAD(P)H-binding
XdhC_C	PF13478.6	gi|288561281|ref|YP_003424767.1|	-	0.025	15.1	0.0	0.041	14.4	0.0	1.5	1	1	0	1	1	1	0	XdhC	Rossmann	domain
RNA_pol_RpbG	PF16992.5	gi|288561281|ref|YP_003424767.1|	-	0.04	14.0	0.4	0.15	12.1	0.1	2.0	2	0	0	2	2	2	0	DNA-directed	RNA	polymerase,	subunit	G
Sacchrp_dh_NADP	PF03435.18	gi|288561281|ref|YP_003424767.1|	-	0.046	14.0	0.1	0.083	13.1	0.1	1.4	1	0	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
Lycopene_cycl	PF05834.12	gi|288561281|ref|YP_003424767.1|	-	0.13	11.2	0.0	0.2	10.7	0.0	1.2	1	0	0	1	1	1	0	Lycopene	cyclase	protein
Lactamase_B	PF00753.27	gi|288561282|ref|YP_003424768.1|	-	1.2e-25	90.7	1.5	1.7e-25	90.2	1.5	1.2	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|288561282|ref|YP_003424768.1|	-	7.4e-06	25.6	0.1	8.9e-06	25.4	0.1	1.3	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_6	PF16661.5	gi|288561282|ref|YP_003424768.1|	-	0.098	12.1	0.0	0.15	11.5	0.0	1.3	1	0	0	1	1	1	0	Metallo-beta-lactamase	superfamily	domain
Hjc	PF01870.18	gi|288561283|ref|YP_003424769.1|	-	1.4e-24	85.8	0.0	1.8e-24	85.5	0.0	1.1	1	0	0	1	1	1	1	Archaeal	holliday	junction	resolvase	(hjc)
Radical_SAM	PF04055.21	gi|288561284|ref|YP_003424770.1|	-	4.5e-09	36.9	0.1	1.3e-08	35.4	0.1	1.8	1	1	0	1	1	1	1	Radical	SAM	superfamily
BATS	PF06968.13	gi|288561284|ref|YP_003424770.1|	-	0.029	14.5	0.0	0.34	11.1	0.0	2.3	2	0	0	2	2	2	0	Biotin	and	Thiamin	Synthesis	associated	domain
XTBD	PF11952.8	gi|288561284|ref|YP_003424770.1|	-	0.038	13.7	0.0	8.4	6.2	0.0	2.6	2	1	0	2	2	2	0	XRN-Two	Binding	Domain,	XTBD
GatB_N	PF02934.15	gi|288561285|ref|YP_003424771.1|	-	2.1e-88	296.2	0.0	2.8e-88	295.9	0.0	1.1	1	0	0	1	1	1	1	GatB/GatE	catalytic	domain
GatB_Yqey	PF02637.18	gi|288561285|ref|YP_003424771.1|	-	1.4e-39	135.3	2.2	6.3e-39	133.2	0.8	2.2	2	0	0	2	2	2	1	GatB	domain
CBS	PF00571.28	gi|288561286|ref|YP_003424772.1|	-	8.2e-26	90.2	4.7	1.9e-13	50.6	0.1	2.5	2	0	0	2	2	2	2	CBS	domain
ParBc	PF02195.18	gi|288561286|ref|YP_003424772.1|	-	5.8e-12	45.7	0.2	1.6e-11	44.3	0.0	1.9	2	0	0	2	2	2	1	ParB-like	nuclease	domain
ParBc_2	PF08857.11	gi|288561286|ref|YP_003424772.1|	-	0.0033	17.5	0.3	0.016	15.3	0.3	2.2	1	1	0	1	1	1	1	Putative	ParB-like	nuclease
Peptidase_S29	PF02907.15	gi|288561286|ref|YP_003424772.1|	-	0.082	12.6	0.0	4.9	6.9	0.0	2.3	2	0	0	2	2	2	0	Hepatitis	C	virus	NS3	protease
PRA-PH	PF01503.17	gi|288561287|ref|YP_003424773.1|	-	8.5e-15	55.0	0.2	1e-14	54.7	0.2	1.2	1	0	0	1	1	1	1	Phosphoribosyl-ATP	pyrophosphohydrolase
MazG	PF03819.17	gi|288561287|ref|YP_003424773.1|	-	0.28	11.4	3.6	0.12	12.6	1.6	1.5	2	0	0	2	2	2	0	MazG	nucleotide	pyrophosphohydrolase	domain
Acetyltransf_1	PF00583.25	gi|288561288|ref|YP_003424774.1|	-	9.4e-13	48.4	0.0	1.6e-12	47.7	0.0	1.4	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_3	PF13302.7	gi|288561288|ref|YP_003424774.1|	-	9e-08	32.9	0.0	7.7e-07	29.9	0.0	2.0	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.7	gi|288561288|ref|YP_003424774.1|	-	1.8e-05	24.6	0.4	0.00034	20.5	0.0	2.4	2	1	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.6	gi|288561288|ref|YP_003424774.1|	-	4.4e-05	23.2	0.0	0.00012	21.8	0.0	1.6	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.7	gi|288561288|ref|YP_003424774.1|	-	0.0001	22.7	0.0	0.00015	22.1	0.0	1.5	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
AIRC	PF00731.20	gi|288561289|ref|YP_003424775.1|	-	2.8e-18	65.9	2.6	4.1e-18	65.4	2.6	1.2	1	0	0	1	1	1	1	AIR	carboxylase
Sua5_yciO_yrdC	PF01300.18	gi|288561290|ref|YP_003424776.1|	-	3.3e-46	157.0	0.0	5.5e-46	156.3	0.0	1.3	1	0	0	1	1	1	1	Telomere	recombination
zf-HYPF	PF07503.12	gi|288561290|ref|YP_003424776.1|	-	1.3e-30	104.9	15.1	1.3e-16	60.1	3.7	2.9	2	0	0	2	2	2	2	HypF	finger
HypF_C	PF17788.1	gi|288561290|ref|YP_003424776.1|	-	4.1e-30	104.5	0.2	1.3e-29	102.9	0.2	1.9	1	0	0	1	1	1	1	HypF	Kae1-like	domain
Acylphosphatase	PF00708.18	gi|288561290|ref|YP_003424776.1|	-	7.5e-23	80.8	0.0	1.8e-22	79.5	0.0	1.7	1	0	0	1	1	1	1	Acylphosphatase
Peptidase_M22	PF00814.25	gi|288561290|ref|YP_003424776.1|	-	0.00078	19.2	0.0	0.49	10.1	0.0	2.3	2	0	0	2	2	2	2	Glycoprotease	family
FYVE	PF01363.21	gi|288561290|ref|YP_003424776.1|	-	0.78	9.9	2.7	28	4.9	0.2	2.5	2	0	0	2	2	2	0	FYVE	zinc	finger
LIM	PF00412.22	gi|288561290|ref|YP_003424776.1|	-	2.1	8.6	4.9	11	6.3	2.4	2.6	1	1	1	2	2	2	0	LIM	domain
DZR	PF12773.7	gi|288561290|ref|YP_003424776.1|	-	7.9	6.6	8.8	6.6e+02	0.4	8.8	2.5	1	1	0	1	1	1	0	Double	zinc	ribbon
Fer4_9	PF13187.6	gi|288561292|ref|YP_003424778.1|	-	3.3e-07	30.4	25.3	3.6e-05	23.8	2.4	2.5	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_5	PF12801.7	gi|288561292|ref|YP_003424778.1|	-	8.6e-07	28.8	8.6	0.00011	22.1	0.1	4.1	4	1	1	5	5	5	2	4Fe-4S	binding	domain
Fer4	PF00037.27	gi|288561292|ref|YP_003424778.1|	-	2.4e-06	27.1	16.9	0.00044	20.0	2.8	3.4	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|288561292|ref|YP_003424778.1|	-	4.3e-06	26.6	3.8	4.3e-06	26.6	3.8	3.2	3	0	0	3	3	3	1	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|288561292|ref|YP_003424778.1|	-	6.2e-05	23.0	16.4	6.2e-05	23.0	16.4	2.0	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|288561292|ref|YP_003424778.1|	-	0.00031	21.3	13.7	0.0014	19.2	4.7	2.7	3	1	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|288561292|ref|YP_003424778.1|	-	0.0011	18.9	3.7	0.0011	18.9	3.7	3.6	3	1	1	4	4	4	1	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|288561292|ref|YP_003424778.1|	-	0.0012	19.0	11.9	0.0012	19.0	11.9	2.2	1	1	1	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|288561292|ref|YP_003424778.1|	-	0.0024	18.0	6.5	0.0024	18.0	6.5	2.5	1	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|288561292|ref|YP_003424778.1|	-	0.017	15.6	4.2	0.017	15.6	4.2	3.5	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|288561292|ref|YP_003424778.1|	-	0.036	14.6	6.6	0.036	14.6	6.6	2.9	2	1	0	2	2	2	0	4Fe-4S	dicluster	domain
HTH_5	PF01022.20	gi|288561293|ref|YP_003424779.1|	-	1.3e-12	47.4	0.1	1.9e-12	46.8	0.1	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.7	gi|288561293|ref|YP_003424779.1|	-	2.7e-08	33.8	0.0	5.1e-08	32.9	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
PadR	PF03551.14	gi|288561293|ref|YP_003424779.1|	-	4e-05	23.5	0.2	0.00059	19.7	0.1	2.5	2	1	0	2	2	2	1	Transcriptional	regulator	PadR-like	family
TrmB	PF01978.19	gi|288561293|ref|YP_003424779.1|	-	0.0066	16.3	0.0	0.013	15.4	0.0	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.6	gi|288561293|ref|YP_003424779.1|	-	0.015	14.8	0.6	0.11	12.1	0.6	2.2	1	1	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
IF2_N	PF04760.15	gi|288561293|ref|YP_003424779.1|	-	0.047	13.5	0.1	0.23	11.3	0.0	2.1	2	0	0	2	2	2	0	Translation	initiation	factor	IF-2,	N-terminal	region
GrpE	PF01025.19	gi|288561294|ref|YP_003424780.1|	-	5.2e-44	149.8	10.3	5.2e-44	149.8	10.3	2.2	1	1	1	2	2	2	1	GrpE
Csm1_N	PF18504.1	gi|288561294|ref|YP_003424780.1|	-	0.0037	17.6	2.8	0.0037	17.6	2.8	3.7	3	1	0	4	4	4	1	Csm1	N-terminal	domain
RPW8	PF05659.11	gi|288561294|ref|YP_003424780.1|	-	0.026	14.2	6.5	0.2	11.4	0.4	2.8	2	1	0	2	2	2	0	Arabidopsis	broad-spectrum	mildew	resistance	protein	RPW8
GD_AH_C	PF04295.13	gi|288561294|ref|YP_003424780.1|	-	0.036	12.9	0.0	0.058	12.2	0.0	1.3	1	1	0	1	1	1	0	D-galactarate	dehydratase	/	Altronate	hydrolase,	C	terminus
DUF5442	PF17514.2	gi|288561294|ref|YP_003424780.1|	-	0.089	13.0	0.3	0.089	13.0	0.3	3.6	2	1	2	4	4	4	0	Family	of	unknown	function	(DUF5442)
Exonuc_VII_L	PF02601.15	gi|288561294|ref|YP_003424780.1|	-	1.4	8.4	7.9	1.9	8.0	7.9	1.2	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
WDCP	PF15390.6	gi|288561294|ref|YP_003424780.1|	-	3.5	5.9	10.7	4.8	5.4	10.7	1.2	1	0	0	1	1	1	0	WD	repeat	and	coiled-coil-containing	protein	family
Hid1	PF12722.7	gi|288561294|ref|YP_003424780.1|	-	6.7	4.7	9.8	7.3	4.6	9.8	1.1	1	0	0	1	1	1	0	High-temperature-induced	dauer-formation	protein
HSP70	PF00012.20	gi|288561295|ref|YP_003424781.1|	-	9.9e-225	747.3	17.5	8.9e-204	678.1	14.7	2.0	1	1	1	2	2	2	2	Hsp70	protein
MreB_Mbl	PF06723.13	gi|288561295|ref|YP_003424781.1|	-	1.4e-20	73.4	3.2	1.4e-20	73.4	3.2	2.6	2	1	0	2	2	2	1	MreB/Mbl	protein
FGGY_C	PF02782.16	gi|288561295|ref|YP_003424781.1|	-	7.1e-06	25.9	0.0	1.4e-05	25.0	0.0	1.5	1	0	0	1	1	1	1	FGGY	family	of	carbohydrate	kinases,	C-terminal	domain
StbA	PF06406.11	gi|288561295|ref|YP_003424781.1|	-	0.0027	17.0	0.2	0.0027	17.0	0.2	2.5	3	0	0	3	3	3	1	StbA	protein
ExbD	PF02472.16	gi|288561295|ref|YP_003424781.1|	-	0.15	12.2	4.8	2.5	8.3	2.3	2.8	2	0	0	2	2	2	0	Biopolymer	transport	protein	ExbD/TolR
Glyco_hydro_2	PF00703.21	gi|288561295|ref|YP_003424781.1|	-	2.4	8.9	4.9	2.8	8.7	2.4	2.4	2	0	0	2	2	2	0	Glycosyl	hydrolases	family	2
PTS_IIB	PF02302.17	gi|288561295|ref|YP_003424781.1|	-	8.1	7.2	8.4	4.5	8.0	3.5	3.1	3	0	0	3	3	3	0	PTS	system,	Lactose/Cellobiose	specific	IIB	subunit
DnaJ_C	PF01556.18	gi|288561296|ref|YP_003424782.1|	-	1.5e-45	155.0	0.6	2.2e-45	154.4	0.6	1.3	1	0	0	1	1	1	1	DnaJ	C	terminal	domain
DnaJ	PF00226.31	gi|288561296|ref|YP_003424782.1|	-	1.4e-27	95.6	6.4	2.9e-27	94.5	6.4	1.6	1	0	0	1	1	1	1	DnaJ	domain
DnaJ_CXXCXGXG	PF00684.19	gi|288561296|ref|YP_003424782.1|	-	5.2e-13	49.1	17.4	8.7e-13	48.4	17.4	1.4	1	0	0	1	1	1	1	DnaJ	central	domain
ADH_zinc_N	PF00107.26	gi|288561296|ref|YP_003424782.1|	-	0.016	15.2	0.1	7.5	6.5	0.2	2.4	2	0	0	2	2	2	0	Zinc-binding	dehydrogenase
FdhE	PF04216.12	gi|288561296|ref|YP_003424782.1|	-	0.042	13.7	5.4	0.11	12.3	4.5	2.0	1	1	1	2	2	2	0	Protein	involved	in	formate	dehydrogenase	formation
Aminopep	PF10023.9	gi|288561296|ref|YP_003424782.1|	-	0.087	12.2	0.8	0.12	11.7	0.8	1.2	1	0	0	1	1	1	0	Putative	aminopeptidase
Anti-TRAP	PF15777.5	gi|288561296|ref|YP_003424782.1|	-	0.096	12.7	18.7	0.13	12.3	4.8	3.1	2	1	2	4	4	4	0	Tryptophan	RNA-binding	attenuator	protein	inhibitory	protein
zf-RING_10	PF16685.5	gi|288561296|ref|YP_003424782.1|	-	0.14	12.3	0.3	0.14	12.3	0.3	2.0	2	0	0	2	2	2	0	zinc	RING	finger	of	MSL2
TackOD1	PF18551.1	gi|288561296|ref|YP_003424782.1|	-	0.15	11.7	4.7	5.6	6.6	1.1	2.3	1	1	1	2	2	2	0	Thaumarchaeal	output	domain	1
zf_Rg	PF17915.1	gi|288561296|ref|YP_003424782.1|	-	0.2	11.1	3.3	22	4.5	0.0	3.5	3	0	0	3	3	3	0	Reverse	gyrase	zinc	finger
Zn_Tnp_IS1595	PF12760.7	gi|288561296|ref|YP_003424782.1|	-	0.36	10.8	5.3	1.6	8.8	0.7	2.6	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
zf-C3HC4_3	PF13920.6	gi|288561296|ref|YP_003424782.1|	-	0.38	10.6	6.5	0.21	11.5	0.3	2.2	1	1	1	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
PHD_4	PF16866.5	gi|288561296|ref|YP_003424782.1|	-	0.41	10.8	3.4	0.4	10.8	1.7	1.9	2	0	0	2	2	1	0	PHD-finger
DNA_ligase_ZBD	PF03119.16	gi|288561296|ref|YP_003424782.1|	-	0.89	9.6	4.7	3.6	7.7	0.2	2.5	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
HypA	PF01155.19	gi|288561296|ref|YP_003424782.1|	-	1.5	8.8	10.1	2.5	8.1	0.7	2.4	1	1	1	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zinc_ribbon_9	PF14369.6	gi|288561296|ref|YP_003424782.1|	-	1.9	8.8	7.9	7.7	6.9	0.4	3.4	2	1	1	3	3	3	0	zinc-ribbon
zf-FPG_IleRS	PF06827.14	gi|288561296|ref|YP_003424782.1|	-	2.3	8.2	7.7	14	5.6	0.3	3.4	3	0	0	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
BioW	PF03744.13	gi|288561297|ref|YP_003424783.1|	-	1.3e-84	283.5	1.7	1.5e-84	283.4	1.7	1.0	1	0	0	1	1	1	1	6-carboxyhexanoate--CoA	ligase
Cas_Csx8	PF09657.10	gi|288561297|ref|YP_003424783.1|	-	0.3	10.0	7.1	0.041	12.9	3.1	1.5	2	0	0	2	2	2	0	CRISPR-associated	protein	Csx8	(Cas_Csx8)
Aminotran_1_2	PF00155.21	gi|288561298|ref|YP_003424784.1|	-	9.5e-62	209.2	0.0	1.1e-61	209.0	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.19	gi|288561298|ref|YP_003424784.1|	-	9.4e-06	24.8	0.1	1.9e-05	23.8	0.1	1.4	2	0	0	2	2	2	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.20	gi|288561298|ref|YP_003424784.1|	-	0.00044	18.9	0.1	0.00068	18.3	0.1	1.2	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Aminotran_3	PF00202.21	gi|288561298|ref|YP_003424784.1|	-	0.017	13.8	0.1	0.027	13.2	0.1	1.5	1	1	0	1	1	1	0	Aminotransferase	class-III
SHMT	PF00464.19	gi|288561298|ref|YP_003424784.1|	-	0.03	12.9	0.0	4	5.9	0.0	2.1	2	0	0	2	2	2	0	Serine	hydroxymethyltransferase
DUF5502	PF17606.2	gi|288561298|ref|YP_003424784.1|	-	0.033	14.9	0.6	0.084	13.6	0.6	1.6	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5502)
DegT_DnrJ_EryC1	PF01041.17	gi|288561298|ref|YP_003424784.1|	-	0.14	11.4	0.0	0.29	10.4	0.0	1.4	2	0	0	2	2	2	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Big_3_5	PF16640.5	gi|288561299|ref|YP_003424785.1|	-	2.5e-28	98.1	57.8	2.1e-09	37.4	4.5	10.3	10	0	0	10	10	10	6	Bacterial	Ig-like	domain	(group	3)
CarboxypepD_reg	PF13620.6	gi|288561299|ref|YP_003424785.1|	-	7.7e-12	45.3	26.5	0.24	11.7	0.1	8.9	8	0	0	8	8	8	6	Carboxypeptidase	regulatory-like	domain
Big_1	PF02369.16	gi|288561299|ref|YP_003424785.1|	-	4.7e-11	42.5	52.4	3e-07	30.4	6.8	10.5	11	0	0	11	11	11	4	Bacterial	Ig-like	domain	(group	1)
MG4	PF17789.1	gi|288561299|ref|YP_003424785.1|	-	1.9e-08	34.3	8.7	0.0047	17.1	0.0	6.2	5	0	0	5	5	5	1	Macroglobulin	domain	MG4
Invasin_D3	PF09134.10	gi|288561299|ref|YP_003424785.1|	-	2.3e-07	31.0	62.4	1.2e-05	25.5	10.9	11.5	11	0	0	11	11	11	3	Invasin,	domain	3
DUF3841	PF12952.7	gi|288561299|ref|YP_003424785.1|	-	3.5e-07	30.2	0.4	4.4	7.0	0.0	5.2	5	0	0	5	5	5	3	Domain	of	unknown	function	(DUF3841)
Beta_helix	PF13229.6	gi|288561299|ref|YP_003424785.1|	-	0.00026	20.9	30.1	0.00026	20.9	30.1	15.7	8	4	8	17	17	17	7	Right	handed	beta	helix	region
DUF2149	PF09919.9	gi|288561300|ref|YP_003424786.1|	-	3.5e-23	81.7	1.7	4.7e-23	81.3	1.7	1.1	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2149)
SpoIIIAH	PF12685.7	gi|288561300|ref|YP_003424786.1|	-	0.01	15.7	1.1	0.01	15.7	1.1	1.6	1	1	0	1	1	1	0	SpoIIIAH-like	protein
Styelin	PF17562.2	gi|288561300|ref|YP_003424786.1|	-	0.072	13.5	1.8	0.14	12.5	1.8	1.5	1	0	0	1	1	1	0	Styelin
MotA_ExbB	PF01618.16	gi|288561301|ref|YP_003424787.1|	-	2.7e-11	43.3	0.0	3.8e-11	42.8	0.0	1.3	1	0	0	1	1	1	1	MotA/TolQ/ExbB	proton	channel	family
AICARFT_IMPCHas	PF01808.18	gi|288561301|ref|YP_003424787.1|	-	0.01	15.3	0.5	0.017	14.6	0.5	1.4	1	1	0	1	1	1	0	AICARFT/IMPCHase	bienzyme
DUF2162	PF09930.9	gi|288561302|ref|YP_003424788.1|	-	5.5e-67	225.4	33.1	6.3e-67	225.3	33.1	1.0	1	0	0	1	1	1	1	Predicted	transporter	(DUF2162)
Ycf4	PF02392.16	gi|288561302|ref|YP_003424788.1|	-	1.2	8.7	9.0	0.037	13.6	2.0	1.9	2	0	0	2	2	2	0	Ycf4
CobN-Mg_chel	PF02514.16	gi|288561303|ref|YP_003424789.1|	-	3e-214	714.1	0.8	6.3e-164	547.4	1.6	2.2	2	0	0	2	2	2	2	CobN/Magnesium	Chelatase
Syndecan	PF01034.20	gi|288561303|ref|YP_003424789.1|	-	0.065	13.2	1.1	1.3	9.0	0.1	2.5	2	0	0	2	2	2	0	Syndecan	domain
BUD22	PF09073.10	gi|288561303|ref|YP_003424789.1|	-	2.7	7.3	4.7	5.8	6.1	4.7	1.5	1	0	0	1	1	1	0	BUD22
DUF3344	PF11824.8	gi|288561304|ref|YP_003424790.1|	-	1.1e-150	500.9	85.9	2.4e-44	152.0	14.7	5.4	5	0	0	5	5	5	4	Protein	of	unknown	function	(DUF3344)
Big_3_5	PF16640.5	gi|288561304|ref|YP_003424790.1|	-	1.1e-10	41.6	32.9	3e-09	36.9	9.5	6.6	6	0	0	6	6	6	2	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|288561304|ref|YP_003424790.1|	-	1.1e-08	35.0	5.1	1.1e-08	35.0	5.1	5.7	7	0	0	7	7	7	2	Bacterial	Ig-like	domain	(group	1)
Invasin_D3	PF09134.10	gi|288561304|ref|YP_003424790.1|	-	1.1e-06	28.9	11.2	1.1e-06	28.9	11.2	5.0	5	0	0	5	5	5	2	Invasin,	domain	3
CarboxypepD_reg	PF13620.6	gi|288561304|ref|YP_003424790.1|	-	1.6e-05	25.1	15.4	0.00024	21.3	1.7	4.4	5	0	0	5	5	5	2	Carboxypeptidase	regulatory-like	domain
LigA	PF07746.11	gi|288561304|ref|YP_003424790.1|	-	0.0058	16.8	0.1	2.7	8.2	0.0	3.0	2	0	0	2	2	2	1	Aromatic-ring-opening	dioxygenase	LigAB,	LigA	subunit
DUF1659	PF07872.11	gi|288561304|ref|YP_003424790.1|	-	0.34	10.6	2.4	4.1	7.1	0.3	3.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1659)
DUF3244	PF11589.8	gi|288561304|ref|YP_003424790.1|	-	3.7	7.7	13.4	8	6.6	0.1	5.8	5	1	0	5	5	5	0	Domain	of	unknown	function	(DUF3244)
CHU_C	PF13585.6	gi|288561304|ref|YP_003424790.1|	-	6.4	6.9	11.4	9.3	6.4	0.0	5.4	5	0	0	5	5	5	0	C-terminal	domain	of	CHU	protein	family
DUF3344	PF11824.8	gi|288561305|ref|YP_003424791.1|	-	7.7e-296	977.0	179.6	1.3e-46	159.4	14.2	9.3	9	0	0	9	9	9	7	Protein	of	unknown	function	(DUF3344)
Big_3_5	PF16640.5	gi|288561305|ref|YP_003424791.1|	-	4.2e-08	33.3	11.3	4.2e-08	33.3	11.3	10.3	9	1	0	9	9	9	2	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|288561305|ref|YP_003424791.1|	-	3.7e-05	23.6	6.3	3.7e-05	23.6	6.3	10.1	12	0	0	12	12	12	2	Bacterial	Ig-like	domain	(group	1)
MG4	PF17789.1	gi|288561305|ref|YP_003424791.1|	-	0.00025	21.1	2.6	0.12	12.6	0.0	3.3	3	0	0	3	3	3	2	Macroglobulin	domain	MG4
Ependymin	PF00811.18	gi|288561305|ref|YP_003424791.1|	-	0.00085	19.6	3.8	42	4.4	0.0	6.7	7	0	0	7	7	7	0	Ependymin
Invasin_D3	PF09134.10	gi|288561305|ref|YP_003424791.1|	-	0.0019	18.5	33.2	0.0059	16.9	13.1	7.3	5	0	0	5	5	5	2	Invasin,	domain	3
Augurin	PF15187.6	gi|288561305|ref|YP_003424791.1|	-	0.0075	16.4	0.0	1.7e+02	2.4	0.0	5.0	5	0	0	5	5	5	0	Oesophageal	cancer-related	gene	4
Pentapeptide_3	PF13576.6	gi|288561305|ref|YP_003424791.1|	-	9.4	6.5	7.8	10	6.4	0.3	4.4	2	1	1	3	3	3	0	Pentapeptide	repeats	(9	copies)
DUF2149	PF09919.9	gi|288561306|ref|YP_003424792.1|	-	3e-23	81.9	2.6	3.4e-23	81.7	2.6	1.0	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2149)
7TMR-HDED	PF07697.11	gi|288561306|ref|YP_003424792.1|	-	0.011	15.9	0.1	0.012	15.7	0.1	1.1	1	0	0	1	1	1	0	7TM-HD	extracellular
Claudin_2	PF13903.6	gi|288561306|ref|YP_003424792.1|	-	0.073	12.8	0.0	0.091	12.5	0.0	1.1	1	0	0	1	1	1	0	PMP-22/EMP/MP20/Claudin	tight	junction
EphA2_TM	PF14575.6	gi|288561306|ref|YP_003424792.1|	-	0.16	12.9	0.0	0.38	11.7	0.0	1.6	2	0	0	2	2	2	0	Ephrin	type-A	receptor	2	transmembrane	domain
MotA_ExbB	PF01618.16	gi|288561307|ref|YP_003424793.1|	-	4.6e-11	42.6	0.9	9e-11	41.6	0.9	1.6	1	1	0	1	1	1	1	MotA/TolQ/ExbB	proton	channel	family
Tubulin	PF00091.25	gi|288561307|ref|YP_003424793.1|	-	0.057	13.6	0.1	0.15	12.2	0.0	1.8	2	0	0	2	2	2	0	Tubulin/FtsZ	family,	GTPase	domain
ISK_Channel	PF02060.15	gi|288561307|ref|YP_003424793.1|	-	0.14	11.9	0.1	0.26	11.0	0.1	1.5	1	0	0	1	1	1	0	Slow	voltage-gated	potassium	channel
DUF3149	PF11346.8	gi|288561307|ref|YP_003424793.1|	-	0.32	10.7	0.0	0.32	10.7	0.0	2.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3149)
DUF3918	PF13056.6	gi|288561307|ref|YP_003424793.1|	-	1.3	8.7	6.9	0.2	11.3	0.4	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3918)
Big_3_5	PF16640.5	gi|288561308|ref|YP_003424794.1|	-	1.3e-12	47.7	13.5	1.2e-10	41.4	9.0	5.8	5	1	1	6	6	6	2	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|288561308|ref|YP_003424794.1|	-	3.2e-09	36.6	4.4	3.2e-09	36.6	4.4	6.1	5	1	1	6	6	6	2	Bacterial	Ig-like	domain	(group	1)
Beta_helix	PF13229.6	gi|288561308|ref|YP_003424794.1|	-	5.1e-08	32.9	73.2	9.1e-06	25.6	34.6	8.9	2	2	5	7	7	7	5	Right	handed	beta	helix	region
Invasin_D3	PF09134.10	gi|288561308|ref|YP_003424794.1|	-	1e-06	28.9	11.5	1e-06	28.9	11.5	7.1	7	1	2	9	9	9	2	Invasin,	domain	3
CarboxypepD_reg	PF13620.6	gi|288561308|ref|YP_003424794.1|	-	0.00034	20.8	17.4	0.00063	20.0	2.0	4.7	4	0	0	4	4	4	2	Carboxypeptidase	regulatory-like	domain
GTP_EFTU_D2	PF03144.25	gi|288561308|ref|YP_003424794.1|	-	0.075	13.4	0.4	0.53	10.7	0.0	2.5	2	0	0	2	2	2	0	Elongation	factor	Tu	domain	2
Cupredoxin_1	PF13473.6	gi|288561308|ref|YP_003424794.1|	-	0.21	11.7	10.3	1	9.5	0.1	4.5	4	1	1	5	5	5	0	Cupredoxin-like	domain
Beta_helix	PF13229.6	gi|288561309|ref|YP_003424795.1|	-	4.5e-19	68.9	181.5	5.5e-05	23.1	25.2	8.4	2	2	3	6	6	6	5	Right	handed	beta	helix	region
NosD	PF05048.13	gi|288561309|ref|YP_003424795.1|	-	3.4e-07	29.8	160.9	3.2e-05	23.3	27.6	8.0	1	1	3	7	7	7	5	Periplasmic	copper-binding	protein	(NosD)
Big_3_5	PF16640.5	gi|288561310|ref|YP_003424796.1|	-	3.5e-31	107.2	44.6	2.3e-08	34.1	10.7	8.0	7	0	0	7	7	7	5	Bacterial	Ig-like	domain	(group	3)
Beta_helix	PF13229.6	gi|288561310|ref|YP_003424796.1|	-	9.6e-11	41.8	78.6	2.8e-09	37.0	41.5	10.0	4	2	4	8	8	8	2	Right	handed	beta	helix	region
MG4	PF17789.1	gi|288561310|ref|YP_003424796.1|	-	1.8e-05	24.8	3.2	0.069	13.3	0.0	4.4	3	0	0	3	3	3	2	Macroglobulin	domain	MG4
Big_1	PF02369.16	gi|288561310|ref|YP_003424796.1|	-	0.00049	20.1	5.6	0.00049	20.1	5.6	6.7	7	1	1	8	8	8	2	Bacterial	Ig-like	domain	(group	1)
Invasin_D3	PF09134.10	gi|288561310|ref|YP_003424796.1|	-	0.076	13.3	0.2	0.012	15.9	12.1	5.6	5	0	0	5	5	5	0	Invasin,	domain	3
Beta_helix	PF13229.6	gi|288561311|ref|YP_003424797.1|	-	4.5e-25	88.3	313.7	3.7e-06	26.9	9.7	17.4	3	3	12	16	16	16	10	Right	handed	beta	helix	region
Big_3_5	PF16640.5	gi|288561311|ref|YP_003424797.1|	-	3.6e-08	33.5	11.3	3.6e-08	33.5	11.3	9.1	9	1	2	11	11	11	3	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|288561311|ref|YP_003424797.1|	-	3.2e-05	23.9	6.3	3.2e-05	23.9	6.3	8.6	8	0	0	8	8	8	2	Bacterial	Ig-like	domain	(group	1)
DUF11	PF01345.18	gi|288561311|ref|YP_003424797.1|	-	3.2e-05	24.2	9.0	0.00083	19.6	0.0	4.8	4	0	0	4	4	4	2	Domain	of	unknown	function	DUF11
MG4	PF17789.1	gi|288561311|ref|YP_003424797.1|	-	0.00014	22.0	5.6	0.099	12.8	0.0	4.5	3	0	0	3	3	3	2	Macroglobulin	domain	MG4
eIF-5a	PF01287.20	gi|288561311|ref|YP_003424797.1|	-	0.0017	18.4	2.8	8.6	6.6	0.0	5.6	5	0	0	5	5	5	1	Eukaryotic	elongation	factor	5A	hypusine,	DNA-binding	OB	fold
MORN_2	PF07661.13	gi|288561311|ref|YP_003424797.1|	-	0.58	10.6	2.8	39	4.9	0.0	3.8	3	0	0	3	3	3	0	MORN	repeat	variant
BMFP	PF04380.13	gi|288561312|ref|YP_003424798.1|	-	0.00047	20.6	1.8	0.41	11.2	0.0	2.4	1	1	1	2	2	2	2	Membrane	fusogenic	activity
HD_2	PF12917.7	gi|288561312|ref|YP_003424798.1|	-	0.0045	16.8	2.4	0.0055	16.5	2.4	1.2	1	0	0	1	1	1	1	HD	containing	hydrolase-like	enzyme
DUF948	PF06103.11	gi|288561312|ref|YP_003424798.1|	-	0.0048	17.1	2.5	0.11	12.8	0.2	2.3	2	0	0	2	2	2	1	Bacterial	protein	of	unknown	function	(DUF948)
HSBP1	PF06825.12	gi|288561312|ref|YP_003424798.1|	-	0.022	14.6	2.4	0.088	12.7	0.7	2.7	2	1	0	2	2	2	0	Heat	shock	factor	binding	protein	1
Adenylsucc_synt	PF00709.21	gi|288561312|ref|YP_003424798.1|	-	0.023	13.6	0.5	0.027	13.4	0.5	1.0	1	0	0	1	1	1	0	Adenylosuccinate	synthetase
GAS	PF13851.6	gi|288561312|ref|YP_003424798.1|	-	0.048	13.0	6.9	0.024	14.0	3.9	1.9	1	1	0	1	1	1	0	Growth-arrest	specific	micro-tubule	binding
FliT	PF05400.13	gi|288561312|ref|YP_003424798.1|	-	0.055	14.3	1.6	0.055	14.3	1.6	2.1	2	1	0	2	2	2	0	Flagellar	protein	FliT
CusF_Ec	PF11604.8	gi|288561312|ref|YP_003424798.1|	-	0.067	13.2	0.0	0.12	12.4	0.0	1.4	1	0	0	1	1	1	0	Copper	binding	periplasmic	protein	CusF
DUF3221	PF11518.8	gi|288561312|ref|YP_003424798.1|	-	0.076	13.4	1.5	0.093	13.1	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3221)
ZapB	PF06005.12	gi|288561312|ref|YP_003424798.1|	-	0.18	12.2	5.6	0.82	10.1	3.9	2.5	2	2	0	2	2	2	0	Cell	division	protein	ZapB
ORF6C	PF10552.9	gi|288561312|ref|YP_003424798.1|	-	0.23	11.6	5.5	0.24	11.5	1.2	2.6	2	1	0	2	2	2	0	ORF6C	domain
DivIC	PF04977.15	gi|288561312|ref|YP_003424798.1|	-	0.4	10.5	6.6	1.1	9.0	5.0	2.4	2	1	1	3	3	3	0	Septum	formation	initiator
DUF16	PF01519.16	gi|288561312|ref|YP_003424798.1|	-	0.72	10.4	5.3	2.5	8.6	3.5	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	DUF16
DUF3007	PF11460.8	gi|288561312|ref|YP_003424798.1|	-	1.3	9.3	4.6	35	4.7	0.0	3.0	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3007)
Prefoldin_2	PF01920.20	gi|288561312|ref|YP_003424798.1|	-	1.7	8.6	9.3	2.8	8.0	4.5	2.7	1	1	1	2	2	2	0	Prefoldin	subunit
DUF4245	PF14030.6	gi|288561313|ref|YP_003424799.1|	-	0.037	14.1	0.0	0.05	13.6	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4245)
Metal_resist	PF13801.6	gi|288561313|ref|YP_003424799.1|	-	0.076	13.2	1.0	0.14	12.4	1.0	1.6	1	1	0	1	1	1	0	Heavy-metal	resistance
MLANA	PF14991.6	gi|288561313|ref|YP_003424799.1|	-	0.11	12.8	0.3	0.18	12.1	0.2	1.4	1	1	0	1	1	1	0	Protein	melan-A
Allexi_40kDa	PF05549.11	gi|288561313|ref|YP_003424799.1|	-	0.17	11.4	2.4	0.2	11.1	2.4	1.2	1	0	0	1	1	1	0	Allexivirus	40kDa	protein
AAA_32	PF13654.6	gi|288561313|ref|YP_003424799.1|	-	0.23	10.2	8.2	0.29	9.9	8.2	1.0	1	0	0	1	1	1	0	AAA	domain
O-antigen_lig	PF13425.6	gi|288561313|ref|YP_003424799.1|	-	0.25	10.1	2.7	0.28	9.9	2.7	1.0	1	0	0	1	1	1	0	O-antigen	ligase	like	membrane	protein
SID-1_RNA_chan	PF13965.6	gi|288561313|ref|YP_003424799.1|	-	0.28	9.5	0.9	0.32	9.3	0.9	1.0	1	0	0	1	1	1	0	dsRNA-gated	channel	SID-1
Ly49	PF08391.10	gi|288561313|ref|YP_003424799.1|	-	0.42	11.0	6.4	0.2	12.0	4.2	1.6	1	1	0	1	1	1	0	Ly49-like	protein,	N-terminal	region
DUF3139	PF11337.8	gi|288561313|ref|YP_003424799.1|	-	0.46	11.2	5.2	0.31	11.7	1.7	2.2	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3139)
DUF4446	PF14584.6	gi|288561313|ref|YP_003424799.1|	-	0.76	9.7	10.1	0.11	12.5	2.8	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4446)
COG2	PF06148.11	gi|288561313|ref|YP_003424799.1|	-	0.82	9.8	7.0	2.8	8.0	7.0	1.8	1	1	0	1	1	1	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
TssO	PF17561.2	gi|288561313|ref|YP_003424799.1|	-	1	9.5	9.5	14	5.8	9.5	2.4	1	1	0	1	1	1	0	Type	VI	secretion	system,	TssO
DUF4320	PF14208.6	gi|288561313|ref|YP_003424799.1|	-	1.7	8.7	8.4	0.95	9.6	0.4	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4320)
PulG	PF11773.8	gi|288561313|ref|YP_003424799.1|	-	2.4	8.1	7.8	0.32	10.9	3.7	1.6	2	0	0	2	2	2	0	Type	II	secretory	pathway	pseudopilin
DUF948	PF06103.11	gi|288561313|ref|YP_003424799.1|	-	2.6	8.4	8.2	74	3.7	8.2	2.4	1	1	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF948)
DUF2681	PF10883.8	gi|288561313|ref|YP_003424799.1|	-	2.9	8.4	11.2	0.4	11.1	1.8	2.4	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF2681)
Peptidase_M24	PF00557.24	gi|288561314|ref|YP_003424800.1|	-	3.8e-37	128.0	0.0	4.6e-37	127.7	0.0	1.2	1	1	0	1	1	1	1	Metallopeptidase	family	M24
ATP-cone	PF03477.16	gi|288561314|ref|YP_003424800.1|	-	0.11	13.0	0.1	14	6.4	0.0	2.5	2	0	0	2	2	2	0	ATP	cone	domain
Big_3_5	PF16640.5	gi|288561315|ref|YP_003424801.1|	-	7.7e-11	42.0	14.7	7.1e-06	26.1	5.3	3.1	3	0	0	3	3	3	2	Bacterial	Ig-like	domain	(group	3)
Big_1	PF02369.16	gi|288561315|ref|YP_003424801.1|	-	2.5e-09	37.0	4.8	0.00092	19.2	0.9	3.4	3	0	0	3	3	3	2	Bacterial	Ig-like	domain	(group	1)
MG4	PF17789.1	gi|288561315|ref|YP_003424801.1|	-	1.8e-07	31.2	0.2	0.025	14.7	0.0	2.9	2	0	0	2	2	2	2	Macroglobulin	domain	MG4
Beta_helix	PF13229.6	gi|288561315|ref|YP_003424801.1|	-	5.2e-06	26.4	23.4	5.2e-06	26.4	23.4	8.9	3	3	4	7	7	7	2	Right	handed	beta	helix	region
Invasin_D3	PF09134.10	gi|288561315|ref|YP_003424801.1|	-	1.4e-05	25.3	7.6	0.026	14.8	0.1	3.2	1	1	1	2	2	2	2	Invasin,	domain	3
CarbopepD_reg_2	PF13715.6	gi|288561315|ref|YP_003424801.1|	-	0.24	11.4	12.9	3.4	7.7	0.2	3.8	1	1	2	3	3	3	0	CarboxypepD_reg-like	domain
gp45-slide_C	PF09116.10	gi|288561316|ref|YP_003424802.1|	-	0.036	14.1	0.0	0.091	12.8	0.0	1.6	1	0	0	1	1	1	0	gp45	sliding	clamp,	C	terminal
AvrD	PF05655.11	gi|288561316|ref|YP_003424802.1|	-	0.061	12.6	0.0	0.09	12.1	0.0	1.2	1	0	0	1	1	1	0	Pseudomonas	avirulence	D	protein	(AvrD)
FrhB_FdhB_C	PF04432.13	gi|288561317|ref|YP_003424803.1|	-	1.6e-41	141.7	0.0	2.3e-41	141.2	0.0	1.2	1	0	0	1	1	1	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	C	terminus
FrhB_FdhB_N	PF04422.13	gi|288561317|ref|YP_003424803.1|	-	1.8e-31	108.1	0.2	3.1e-31	107.3	0.2	1.4	1	0	0	1	1	1	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	N-term
Oxidored_q6	PF01058.22	gi|288561318|ref|YP_003424804.1|	-	5.5e-24	84.5	0.6	5.5e-24	84.5	0.6	2.0	2	0	0	2	2	1	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
Fer4	PF00037.27	gi|288561318|ref|YP_003424804.1|	-	4.4e-10	38.9	16.8	2.2e-05	24.1	5.1	3.1	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|288561318|ref|YP_003424804.1|	-	2.5e-06	27.5	16.2	1.7e-05	24.9	16.3	2.5	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|288561318|ref|YP_003424804.1|	-	2.8e-06	27.2	12.5	2.4e-05	24.2	1.0	3.2	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|288561318|ref|YP_003424804.1|	-	2.9e-06	27.3	16.2	2.9e-06	27.3	16.2	2.4	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|288561318|ref|YP_003424804.1|	-	1.7e-05	25.3	28.7	4.5e-05	24.0	16.5	3.4	3	1	1	4	4	3	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|288561318|ref|YP_003424804.1|	-	0.00038	20.4	25.2	0.0016	18.4	3.6	3.8	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|288561318|ref|YP_003424804.1|	-	0.002	18.2	14.0	0.002	18.2	14.0	2.9	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Borrelia_P83	PF05262.11	gi|288561318|ref|YP_003424804.1|	-	0.006	15.1	7.1	0.007	14.9	7.1	1.1	1	0	0	1	1	1	1	Borrelia	P83/100	protein
DUF2514	PF10721.9	gi|288561318|ref|YP_003424804.1|	-	0.0094	16.0	3.5	0.016	15.3	3.5	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2514)
Fer4_4	PF12800.7	gi|288561318|ref|YP_003424804.1|	-	0.013	15.9	2.7	0.013	15.9	2.7	3.2	3	0	0	3	3	2	0	4Fe-4S	binding	domain
Tristanin_u2	PF16638.5	gi|288561318|ref|YP_003424804.1|	-	0.08	13.8	6.7	0.13	13.1	6.7	1.2	1	0	0	1	1	1	0	Unstructured	region	on	methyltransferase	between	zinc-fingers
CDC45	PF02724.14	gi|288561318|ref|YP_003424804.1|	-	0.45	8.7	5.8	0.57	8.4	5.8	1.1	1	0	0	1	1	1	0	CDC45-like	protein
Fer4_16	PF13484.6	gi|288561318|ref|YP_003424804.1|	-	0.97	10.4	29.8	0.097	13.6	4.5	4.0	2	2	1	3	3	3	0	4Fe-4S	double	cluster	binding	domain
CCDC53	PF10152.9	gi|288561318|ref|YP_003424804.1|	-	1.2	9.5	8.3	1.9	8.9	8.3	1.2	1	0	0	1	1	1	0	Subunit	CCDC53	of	WASH	complex
Presenilin	PF01080.17	gi|288561318|ref|YP_003424804.1|	-	2.1	7.0	5.4	2.7	6.7	5.4	1.1	1	0	0	1	1	1	0	Presenilin
Merozoite_SPAM	PF07133.11	gi|288561318|ref|YP_003424804.1|	-	2.1	8.3	17.7	3.3	7.7	17.7	1.2	1	0	0	1	1	1	0	Merozoite	surface	protein	(SPAM)
Roughex	PF06020.11	gi|288561318|ref|YP_003424804.1|	-	5.2	6.1	8.4	7.3	5.6	8.4	1.1	1	0	0	1	1	1	0	Drosophila	roughex	protein
EVC2_like	PF12297.8	gi|288561318|ref|YP_003424804.1|	-	5.5	5.6	10.8	7.1	5.2	10.8	1.1	1	0	0	1	1	1	0	Ellis	van	Creveld	protein	2	like	protein
HycI	PF01750.18	gi|288561319|ref|YP_003424805.1|	-	8.6e-31	106.5	0.1	9.7e-31	106.3	0.1	1.0	1	0	0	1	1	1	1	Hydrogenase	maturation	protease
SWIB	PF02201.18	gi|288561319|ref|YP_003424805.1|	-	0.015	15.2	0.0	0.048	13.5	0.0	1.8	2	0	0	2	2	2	0	SWIB/MDM2	domain
NiFeSe_Hases	PF00374.19	gi|288561320|ref|YP_003424806.1|	-	3e-38	132.0	5.9	3.9e-21	75.5	0.0	4.9	3	2	1	5	5	5	4	Nickel-dependent	hydrogenase
Complex1_49kDa	PF00346.19	gi|288561320|ref|YP_003424806.1|	-	0.0075	15.4	0.0	0.018	14.1	0.0	1.6	2	0	0	2	2	2	1	Respiratory-chain	NADH	dehydrogenase,	49	Kd	subunit
Radial_spoke	PF04712.12	gi|288561322|ref|YP_003424808.1|	-	0.0027	16.7	0.2	0.0033	16.4	0.2	1.2	1	0	0	1	1	1	1	Radial	spokehead-like	protein
SR-25	PF10500.9	gi|288561322|ref|YP_003424808.1|	-	0.067	12.8	20.1	0.091	12.4	19.6	1.5	2	0	0	2	2	2	0	Nuclear	RNA-splicing-associated	protein
PKD_channel	PF08016.12	gi|288561322|ref|YP_003424808.1|	-	0.07	11.8	2.3	0.11	11.1	2.3	1.3	1	0	0	1	1	1	0	Polycystin	cation	channel
Apt1	PF10351.9	gi|288561322|ref|YP_003424808.1|	-	0.12	11.2	3.6	0.11	11.3	3.6	1.1	1	0	0	1	1	1	0	Golgi-body	localisation	protein	domain
DUF5320	PF17253.2	gi|288561322|ref|YP_003424808.1|	-	0.13	13.4	2.5	0.87	10.7	1.0	2.1	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5320)
Macoilin	PF09726.9	gi|288561322|ref|YP_003424808.1|	-	0.27	9.8	5.2	0.26	9.8	5.2	1.1	1	0	0	1	1	1	0	Macoilin	family
SpoIIIAH	PF12685.7	gi|288561322|ref|YP_003424808.1|	-	0.29	10.9	5.3	0.4	10.5	5.3	1.4	1	1	0	1	1	1	0	SpoIIIAH-like	protein
Period_C	PF12114.8	gi|288561322|ref|YP_003424808.1|	-	1.5	8.4	22.3	1.1	8.8	20.8	1.5	2	0	0	2	2	2	0	Period	protein	2/3C-terminal	region
PHP_C	PF13263.6	gi|288561323|ref|YP_003424809.1|	-	0.026	14.3	0.0	0.051	13.3	0.0	1.5	1	0	0	1	1	1	0	PHP-associated
Adenine_glyco	PF03352.13	gi|288561324|ref|YP_003424810.1|	-	3.8e-76	254.8	1.0	4.3e-76	254.6	1.0	1.0	1	0	0	1	1	1	1	Methyladenine	glycosylase
GSH-S_ATP	PF02955.16	gi|288561324|ref|YP_003424810.1|	-	0.012	15.1	0.0	0.019	14.3	0.0	1.3	1	0	0	1	1	1	0	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
Glycoamylase	PF10091.9	gi|288561324|ref|YP_003424810.1|	-	0.089	12.3	0.3	0.93	9.0	0.0	2.1	1	1	0	2	2	2	0	Putative	glucoamylase
DUF1319	PF07028.11	gi|288561324|ref|YP_003424810.1|	-	0.11	12.7	0.2	0.17	12.1	0.2	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1319)
DUF2115	PF09888.9	gi|288561325|ref|YP_003424811.1|	-	1.3e-17	64.8	8.9	2.1e-17	64.2	8.9	1.4	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2115)
DUF4473	PF14747.6	gi|288561325|ref|YP_003424811.1|	-	0.021	15.4	0.4	0.041	14.4	0.4	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4473)
CCB2_CCB4	PF11152.8	gi|288561325|ref|YP_003424811.1|	-	0.06	12.7	0.0	0.17	11.2	0.0	1.6	2	0	0	2	2	2	0	Cofactor	assembly	of	complex	C	subunit	B,	CCB2/CCB4
ArsA_ATPase	PF02374.15	gi|288561326|ref|YP_003424812.1|	-	6.5e-112	373.6	1.0	7.4e-112	373.5	1.0	1.0	1	0	0	1	1	1	1	Anion-transporting	ATPase
AAA_31	PF13614.6	gi|288561326|ref|YP_003424812.1|	-	8.8e-14	51.8	0.1	4.2e-13	49.6	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
ParA	PF10609.9	gi|288561326|ref|YP_003424812.1|	-	2e-09	37.3	3.6	2.9e-05	23.7	0.8	2.7	2	1	0	2	2	2	2	NUBPL	iron-transfer	P-loop	NTPase
CbiA	PF01656.23	gi|288561326|ref|YP_003424812.1|	-	2.3e-09	37.4	0.2	1.2e-08	35.1	0.2	2.3	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
SRP54	PF00448.22	gi|288561326|ref|YP_003424812.1|	-	1.3e-05	24.9	1.4	0.0066	16.1	0.3	2.7	2	1	1	3	3	3	2	SRP54-type	protein,	GTPase	domain
Fer4_NifH	PF00142.18	gi|288561326|ref|YP_003424812.1|	-	0.0001	21.8	0.2	0.00025	20.6	0.0	1.7	2	0	0	2	2	2	1	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
PhoH	PF02562.16	gi|288561326|ref|YP_003424812.1|	-	0.0011	18.5	0.0	0.0021	17.5	0.0	1.5	1	0	0	1	1	1	1	PhoH-like	protein
CBP_BcsQ	PF06564.12	gi|288561326|ref|YP_003424812.1|	-	0.0013	18.2	0.1	0.014	14.9	0.0	2.1	2	0	0	2	2	2	1	Cellulose	biosynthesis	protein	BcsQ
AAA_25	PF13481.6	gi|288561326|ref|YP_003424812.1|	-	0.0025	17.4	1.3	0.022	14.4	1.3	2.2	1	1	0	1	1	1	1	AAA	domain
MeaB	PF03308.16	gi|288561326|ref|YP_003424812.1|	-	0.012	14.7	0.2	0.03	13.3	0.0	1.7	2	0	0	2	2	2	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
DnaJ	PF00226.31	gi|288561326|ref|YP_003424812.1|	-	0.05	13.7	0.5	0.92	9.7	0.2	2.3	2	0	0	2	2	2	0	DnaJ	domain
Zeta_toxin	PF06414.12	gi|288561326|ref|YP_003424812.1|	-	0.056	12.7	0.1	0.16	11.2	0.1	1.7	2	0	0	2	2	2	0	Zeta	toxin
PIF1	PF05970.14	gi|288561326|ref|YP_003424812.1|	-	0.26	10.4	5.2	0.47	9.6	0.2	2.1	2	0	0	2	2	2	0	PIF1-like	helicase
HTH_50	PF18024.1	gi|288561327|ref|YP_003424813.1|	-	0.052	13.2	0.3	0.078	12.6	0.3	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
PRANC	PF09372.10	gi|288561328|ref|YP_003424814.1|	-	0.058	13.7	0.0	0.06	13.7	0.0	1.1	1	0	0	1	1	1	0	PRANC	domain
Proteasome	PF00227.26	gi|288561329|ref|YP_003424815.1|	-	0.0099	15.4	0.0	3.5	7.1	0.0	2.2	2	0	0	2	2	2	2	Proteasome	subunit
Molybdop_Fe4S4	PF04879.16	gi|288561330|ref|YP_003424816.1|	-	6.2e-15	54.9	0.6	9.9e-15	54.3	0.6	1.3	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase	Fe4S4	domain
Molybdopterin	PF00384.22	gi|288561330|ref|YP_003424816.1|	-	9.8e-15	54.4	0.0	2.3e-08	33.4	0.0	2.1	2	0	0	2	2	2	2	Molybdopterin	oxidoreductase
GxGYxYP_C	PF14323.6	gi|288561330|ref|YP_003424816.1|	-	0.11	12.3	0.1	0.31	10.9	0.1	1.7	1	1	0	1	1	1	0	GxGYxYP	putative	glycoside	hydrolase	C-terminal	domain
FrhB_FdhB_C	PF04432.13	gi|288561331|ref|YP_003424817.1|	-	1.4e-38	132.2	0.2	1.4e-38	132.2	0.2	2.0	1	1	1	2	2	2	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	C	terminus
FrhB_FdhB_N	PF04422.13	gi|288561331|ref|YP_003424817.1|	-	2.3e-18	66.1	0.0	4.6e-18	65.1	0.0	1.5	1	0	0	1	1	1	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	N-term
Fer4_10	PF13237.6	gi|288561331|ref|YP_003424817.1|	-	8.2e-06	25.8	15.1	0.0015	18.6	0.3	3.5	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|288561331|ref|YP_003424817.1|	-	4.2e-05	24.0	15.1	4.2e-05	24.0	15.1	2.5	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|288561331|ref|YP_003424817.1|	-	8.1e-05	23.5	10.8	0.1	13.6	0.3	3.5	3	0	0	3	3	3	2	4Fe-4S	double	cluster	binding	domain
Fer4_8	PF13183.6	gi|288561331|ref|YP_003424817.1|	-	0.00017	22.0	28.3	0.00035	21.0	16.2	2.6	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|288561331|ref|YP_003424817.1|	-	0.00021	21.4	19.1	0.0033	17.6	0.2	3.9	3	1	1	4	4	4	2	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|288561331|ref|YP_003424817.1|	-	0.00075	20.3	14.9	0.23	12.4	7.4	2.8	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|288561331|ref|YP_003424817.1|	-	0.0019	18.4	10.4	0.073	13.3	0.2	3.0	3	1	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|288561331|ref|YP_003424817.1|	-	0.0056	17.2	20.4	0.13	12.9	18.8	3.3	2	1	2	4	4	4	3	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|288561331|ref|YP_003424817.1|	-	0.0075	16.0	20.4	0.049	13.5	5.2	3.4	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|288561331|ref|YP_003424817.1|	-	0.0077	16.3	15.5	0.14	12.3	1.6	3.4	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|288561331|ref|YP_003424817.1|	-	0.011	15.7	18.9	0.096	12.8	1.6	3.4	3	0	0	3	3	3	0	4Fe-4S	binding	domain
HABP4_PAI-RBP1	PF04774.15	gi|288561331|ref|YP_003424817.1|	-	0.061	14.2	2.2	0.11	13.4	2.2	1.3	1	0	0	1	1	1	0	Hyaluronan	/	mRNA	binding	family
DUF2848	PF11010.8	gi|288561331|ref|YP_003424817.1|	-	0.17	11.5	0.1	0.28	10.7	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2848)
Fer4_13	PF13370.6	gi|288561331|ref|YP_003424817.1|	-	0.35	11.4	16.3	1.4	9.5	5.6	3.4	3	0	0	3	3	3	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
FlpD	PF02662.16	gi|288561332|ref|YP_003424818.1|	-	1.2e-55	186.8	0.1	1.4e-55	186.6	0.1	1.0	1	0	0	1	1	1	1	Methyl-viologen-reducing	hydrogenase,	delta	subunit
tRNA-synt_1	PF00133.22	gi|288561333|ref|YP_003424819.1|	-	1.9e-57	194.8	1.4	2.6e-55	187.8	1.4	3.1	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.13	gi|288561333|ref|YP_003424819.1|	-	2.3e-27	95.8	1.0	6.3e-27	94.4	1.0	1.8	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.11	gi|288561333|ref|YP_003424819.1|	-	2.3e-22	79.3	5.7	4.8e-10	38.7	1.7	4.5	3	2	1	4	4	4	2	tRNA	synthetases	class	I	(M)
tRNA-synt_1_2	PF13603.6	gi|288561333|ref|YP_003424819.1|	-	2.6e-09	36.8	0.0	1.9e-08	34.1	0.0	2.3	2	0	0	2	2	2	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1e	PF01406.19	gi|288561333|ref|YP_003424819.1|	-	3.6e-09	36.4	0.0	0.00044	19.7	0.0	2.7	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1f	PF01921.18	gi|288561333|ref|YP_003424819.1|	-	7.7e-06	25.1	0.7	0.00048	19.2	0.0	3.1	3	0	0	3	3	3	1	tRNA	synthetases	class	I	(K)
Alfin	PF12165.8	gi|288561333|ref|YP_003424819.1|	-	0.0031	17.2	0.1	0.0075	15.9	0.1	1.6	1	0	0	1	1	1	1	Alfin
tRNA-synt_1b	PF00579.25	gi|288561333|ref|YP_003424819.1|	-	0.11	11.8	0.0	0.39	10.0	0.0	1.9	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(W	and	Y)
Gln-synt_C	PF00120.24	gi|288561334|ref|YP_003424820.1|	-	2.1e-133	444.6	0.0	2.6e-133	444.3	0.0	1.1	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.19	gi|288561334|ref|YP_003424820.1|	-	1.1e-23	82.7	0.0	2.6e-23	81.6	0.0	1.7	1	0	0	1	1	1	1	Glutamine	synthetase,	beta-Grasp	domain
GATase_7	PF13537.6	gi|288561335|ref|YP_003424821.1|	-	9.7e-16	57.8	0.0	1.6e-15	57.1	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_6	PF13522.6	gi|288561335|ref|YP_003424821.1|	-	1.8e-15	57.3	0.0	2.7e-15	56.7	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_2	PF00310.21	gi|288561335|ref|YP_003424821.1|	-	0.00019	20.3	0.1	0.037	12.7	0.0	2.8	3	0	0	3	3	3	2	Glutamine	amidotransferases	class-II
GATase_4	PF13230.6	gi|288561335|ref|YP_003424821.1|	-	0.02	13.8	0.0	0.036	13.0	0.0	1.3	1	0	0	1	1	1	0	Glutamine	amidotransferases	class-II
Fra10Ac1	PF09725.9	gi|288561335|ref|YP_003424821.1|	-	0.082	13.0	0.0	0.13	12.4	0.0	1.3	1	0	0	1	1	1	0	Folate-sensitive	fragile	site	protein	Fra10Ac1
GXGXG	PF01493.19	gi|288561336|ref|YP_003424822.1|	-	3.2e-34	118.2	11.6	4e-34	117.9	11.6	1.1	1	0	0	1	1	1	1	GXGXG	motif
FrhB_FdhB_C	PF04432.13	gi|288561337|ref|YP_003424823.1|	-	1.7e-39	135.1	0.2	1.7e-39	135.1	0.2	1.9	2	0	0	2	2	2	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	C	terminus
FrhB_FdhB_N	PF04422.13	gi|288561337|ref|YP_003424823.1|	-	2.1e-14	53.4	0.0	5e-14	52.2	0.0	1.7	1	0	0	1	1	1	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	N-term
Fer4_9	PF13187.6	gi|288561337|ref|YP_003424823.1|	-	2.6e-07	30.7	9.9	2.6e-07	30.7	9.9	1.9	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|288561337|ref|YP_003424823.1|	-	0.00023	21.6	5.9	0.0016	19.0	0.1	2.8	3	0	0	3	3	2	1	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|288561337|ref|YP_003424823.1|	-	0.00038	20.2	5.1	0.00038	20.2	5.1	3.8	4	0	0	4	4	4	2	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|288561337|ref|YP_003424823.1|	-	0.00052	20.9	9.0	0.46	11.5	2.5	3.4	2	1	2	4	4	4	3	4Fe-4S	double	cluster	binding	domain
Fer4_6	PF12837.7	gi|288561337|ref|YP_003424823.1|	-	0.0022	18.0	4.0	0.0022	18.0	4.0	3.3	4	0	0	4	4	4	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|288561337|ref|YP_003424823.1|	-	0.0098	16.5	14.2	0.046	14.3	1.9	2.9	2	1	2	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|288561337|ref|YP_003424823.1|	-	0.011	16.1	8.5	0.055	13.9	1.1	2.9	2	1	2	4	4	4	0	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|288561337|ref|YP_003424823.1|	-	0.017	15.6	2.8	0.017	15.6	2.8	3.1	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|288561337|ref|YP_003424823.1|	-	0.025	14.7	2.8	0.025	14.7	2.8	3.6	4	0	0	4	4	4	0	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|288561337|ref|YP_003424823.1|	-	0.025	14.7	10.1	0.025	14.7	10.1	2.6	3	0	0	3	3	3	0	4Fe-4S	dicluster	domain
Phyto_Pns9_10	PF05878.11	gi|288561337|ref|YP_003424823.1|	-	0.057	12.6	0.8	0.33	10.0	0.0	2.1	3	0	0	3	3	3	0	Phytoreovirus	nonstructural	protein	Pns9/Pns10
Fer4_10	PF13237.6	gi|288561337|ref|YP_003424823.1|	-	0.088	12.9	16.9	0.05	13.7	12.9	2.7	3	1	2	5	5	5	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|288561337|ref|YP_003424823.1|	-	6.8	6.9	11.4	2.8	8.2	0.3	2.9	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Glu_synthase	PF01645.17	gi|288561338|ref|YP_003424824.1|	-	3.9e-128	427.7	5.7	3.9e-128	427.7	5.7	2.0	2	0	0	2	2	2	1	Conserved	region	in	glutamate	synthase
NMO	PF03060.15	gi|288561338|ref|YP_003424824.1|	-	9.9e-13	48.2	2.2	1.6e-12	47.5	2.2	1.3	1	0	0	1	1	1	1	Nitronate	monooxygenase
FMN_dh	PF01070.18	gi|288561338|ref|YP_003424824.1|	-	8.1e-12	44.8	15.0	4.1e-11	42.5	11.3	2.9	2	1	0	2	2	2	1	FMN-dependent	dehydrogenase
Glu_syn_central	PF04898.14	gi|288561338|ref|YP_003424824.1|	-	3.1e-09	36.7	0.7	1.9e-05	24.3	0.1	2.2	2	0	0	2	2	2	2	Glutamate	synthase	central	domain
Fer4	PF00037.27	gi|288561338|ref|YP_003424824.1|	-	6.9e-08	32.0	11.4	2.9e-07	30.0	2.4	3.6	4	0	0	4	4	3	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|288561338|ref|YP_003424824.1|	-	8.3e-08	32.3	17.2	4.7e-06	26.7	11.4	2.6	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|288561338|ref|YP_003424824.1|	-	1.1e-06	28.6	11.1	1.1e-06	28.6	11.1	2.5	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
IMPDH	PF00478.25	gi|288561338|ref|YP_003424824.1|	-	3e-06	26.5	8.4	3e-06	26.5	8.4	2.9	3	1	0	3	3	3	1	IMP	dehydrogenase	/	GMP	reductase	domain
Fer4_16	PF13484.6	gi|288561338|ref|YP_003424824.1|	-	5e-06	27.4	13.8	0.0012	19.7	0.6	3.6	3	0	0	3	3	3	2	4Fe-4S	double	cluster	binding	domain
Fer4_7	PF12838.7	gi|288561338|ref|YP_003424824.1|	-	5.4e-06	26.9	23.7	0.00032	21.2	1.9	3.4	2	1	2	4	4	4	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|288561338|ref|YP_003424824.1|	-	1.7e-05	24.8	17.9	0.0055	16.8	1.9	3.3	2	1	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|288561338|ref|YP_003424824.1|	-	0.00076	19.5	13.3	0.0029	17.6	2.5	3.3	3	0	0	3	3	2	2	4Fe-4S	binding	domain
His_biosynth	PF00977.21	gi|288561338|ref|YP_003424824.1|	-	0.0012	18.4	0.2	0.0025	17.3	0.2	1.5	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
Fer4_8	PF13183.6	gi|288561338|ref|YP_003424824.1|	-	0.0013	19.1	16.6	0.031	14.7	0.7	3.4	3	0	0	3	3	3	1	4Fe-4S	dicluster	domain
ETF_QO	PF05187.13	gi|288561338|ref|YP_003424824.1|	-	0.0052	16.9	7.8	0.014	15.5	7.8	1.7	1	0	0	1	1	1	1	Electron	transfer	flavoprotein-ubiquinone	oxidoreductase,	4Fe-4S
DHO_dh	PF01180.21	gi|288561338|ref|YP_003424824.1|	-	0.011	15.0	2.3	0.011	15.0	2.3	1.8	2	1	0	2	2	2	0	Dihydroorotate	dehydrogenase
Fer4_4	PF12800.7	gi|288561338|ref|YP_003424824.1|	-	0.025	15.1	22.4	0.089	13.3	1.6	3.6	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|288561338|ref|YP_003424824.1|	-	0.042	14.4	20.8	0.078	13.5	0.8	3.5	3	0	0	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|288561338|ref|YP_003424824.1|	-	0.048	13.8	27.3	0.041	14.0	2.5	3.6	3	0	0	3	3	3	0	4Fe-4S	binding	domain
ThiG	PF05690.14	gi|288561338|ref|YP_003424824.1|	-	0.091	12.1	4.1	0.068	12.5	0.8	2.1	2	0	0	2	2	2	0	Thiazole	biosynthesis	protein	ThiG
QRPTase_C	PF01729.19	gi|288561338|ref|YP_003424824.1|	-	0.097	12.4	0.1	0.2	11.4	0.1	1.5	1	0	0	1	1	1	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
G3P_antiterm	PF04309.12	gi|288561338|ref|YP_003424824.1|	-	0.12	11.8	1.3	0.19	11.2	0.2	1.8	2	0	0	2	2	2	0	Glycerol-3-phosphate	responsive	antiterminator
PPDK_N	PF01326.19	gi|288561339|ref|YP_003424825.1|	-	1e-43	149.9	0.0	1.6e-43	149.3	0.0	1.3	1	0	0	1	1	1	1	Pyruvate	phosphate	dikinase,	PEP/pyruvate	binding	domain
DUF496	PF04363.12	gi|288561339|ref|YP_003424825.1|	-	0.2	11.7	5.2	0.72	9.9	0.3	3.0	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF496)
Aminotran_3	PF00202.21	gi|288561340|ref|YP_003424826.1|	-	1e-129	432.8	0.0	1.2e-129	432.5	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
Aminotran_1_2	PF00155.21	gi|288561340|ref|YP_003424826.1|	-	0.00028	20.2	0.0	0.00044	19.5	0.0	1.4	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
AAA_26	PF13500.6	gi|288561342|ref|YP_003424828.1|	-	2.5e-35	122.1	0.0	3.5e-35	121.6	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
DUF1611	PF07755.11	gi|288561342|ref|YP_003424828.1|	-	6.2e-06	25.6	0.0	0.0028	16.9	0.0	2.7	2	1	0	2	2	2	2	Domain	of	unknown	function	(DUF1611_C)	P-loop	domain
CbiA	PF01656.23	gi|288561342|ref|YP_003424828.1|	-	3.2e-05	24.0	0.1	4.8e-05	23.4	0.1	1.3	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
cobW	PF02492.19	gi|288561342|ref|YP_003424828.1|	-	0.011	15.3	0.0	0.02	14.5	0.0	1.4	1	1	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
Radical_SAM	PF04055.21	gi|288561343|ref|YP_003424829.1|	-	3e-15	57.0	0.1	1.2e-11	45.3	0.1	2.3	2	0	0	2	2	2	2	Radical	SAM	superfamily
BATS	PF06968.13	gi|288561343|ref|YP_003424829.1|	-	3.4e-14	52.8	0.0	8.3e-14	51.5	0.0	1.7	2	0	0	2	2	2	1	Biotin	and	Thiamin	Synthesis	associated	domain
DUF2857	PF11198.8	gi|288561343|ref|YP_003424829.1|	-	0.17	11.6	0.1	0.37	10.6	0.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2857)
GCD14	PF08704.10	gi|288561344|ref|YP_003424830.1|	-	2.5e-26	92.9	0.0	6.3e-25	88.3	0.0	2.0	1	1	1	2	2	2	1	tRNA	methyltransferase	complex	GCD14	subunit
Methyltransf_31	PF13847.6	gi|288561344|ref|YP_003424830.1|	-	1.6e-11	44.2	0.0	2.2e-11	43.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.19	gi|288561344|ref|YP_003424830.1|	-	1.6e-07	31.3	0.0	2e-07	31.0	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_25	PF13649.6	gi|288561344|ref|YP_003424830.1|	-	4.3e-06	27.3	0.0	7.3e-06	26.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|288561344|ref|YP_003424830.1|	-	5.2e-06	26.1	0.1	9.8e-06	25.2	0.1	1.5	1	1	0	1	1	1	1	Methyltransferase	small	domain
Ubie_methyltran	PF01209.18	gi|288561344|ref|YP_003424830.1|	-	6.6e-05	22.4	0.1	8.4e-05	22.0	0.1	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_11	PF08241.12	gi|288561344|ref|YP_003424830.1|	-	0.00013	22.5	0.0	0.00023	21.7	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.20	gi|288561344|ref|YP_003424830.1|	-	0.00071	18.7	0.0	0.0011	18.0	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltr_RsmB-F	PF01189.17	gi|288561344|ref|YP_003424830.1|	-	0.0017	18.0	0.0	0.003	17.2	0.0	1.4	1	0	0	1	1	1	1	16S	rRNA	methyltransferase	RsmB/F
PrmA	PF06325.13	gi|288561344|ref|YP_003424830.1|	-	0.0043	16.5	0.0	0.0056	16.1	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_3	PF01596.17	gi|288561344|ref|YP_003424830.1|	-	0.019	14.1	0.6	0.043	13.0	0.4	1.5	1	1	0	1	1	1	0	O-methyltransferase
Methyltransf_18	PF12847.7	gi|288561344|ref|YP_003424830.1|	-	0.053	13.4	0.2	0.13	12.2	0.1	1.6	2	0	0	2	2	2	0	Methyltransferase	domain
Helicase_C	PF00271.31	gi|288561345|ref|YP_003424831.1|	-	3.6e-27	94.9	0.1	2.7e-25	88.9	0.1	3.0	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ERCC4	PF02732.15	gi|288561345|ref|YP_003424831.1|	-	1.1e-23	84.2	0.0	3.3e-23	82.6	0.0	2.0	1	0	0	1	1	1	1	ERCC4	domain
DEAD	PF00270.29	gi|288561345|ref|YP_003424831.1|	-	2.2e-21	76.4	0.0	7.8e-21	74.6	0.0	2.0	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
ResIII	PF04851.15	gi|288561345|ref|YP_003424831.1|	-	2.8e-19	69.7	0.0	2.8e-19	69.7	0.0	2.5	2	1	0	2	2	1	1	Type	III	restriction	enzyme,	res	subunit
HHH_5	PF14520.6	gi|288561345|ref|YP_003424831.1|	-	6.2e-13	49.1	0.1	4.3e-12	46.4	0.1	2.5	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
HHH_2	PF12826.7	gi|288561345|ref|YP_003424831.1|	-	3.4e-11	43.1	0.0	1e-10	41.5	0.0	1.8	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH	PF00633.23	gi|288561345|ref|YP_003424831.1|	-	3.5e-05	23.4	0.1	0.00022	20.9	0.1	2.5	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
HHH_8	PF14716.6	gi|288561345|ref|YP_003424831.1|	-	0.0089	16.4	0.1	0.1	13.0	0.2	2.6	2	0	0	2	2	2	1	Helix-hairpin-helix	domain
PhoH	PF02562.16	gi|288561345|ref|YP_003424831.1|	-	0.0092	15.5	1.0	0.069	12.6	0.1	2.5	2	0	0	2	2	2	1	PhoH-like	protein
5_3_exonuc	PF01367.20	gi|288561345|ref|YP_003424831.1|	-	0.01	16.4	2.7	0.044	14.4	0.2	3.3	2	1	0	2	2	2	0	5'-3'	exonuclease,	C-terminal	SAM	fold
HHH_3	PF12836.7	gi|288561345|ref|YP_003424831.1|	-	0.016	15.4	0.2	0.21	11.9	0.0	2.6	1	1	1	2	2	2	0	Helix-hairpin-helix	motif
Big_3_5	PF16640.5	gi|288561346|ref|YP_003424832.1|	-	1.4e-48	163.0	336.3	3.3e-08	33.6	6.7	33.8	32	5	4	37	37	35	19	Bacterial	Ig-like	domain	(group	3)
Beta_helix	PF13229.6	gi|288561346|ref|YP_003424832.1|	-	2.2e-15	56.8	400.1	2.9e-07	30.5	13.7	19.5	8	7	9	17	17	15	8	Right	handed	beta	helix	region
Big_1	PF02369.16	gi|288561346|ref|YP_003424832.1|	-	1.7e-08	34.3	147.1	0.00028	20.8	1.4	20.8	20	0	0	20	20	18	7	Bacterial	Ig-like	domain	(group	1)
DUF4399	PF14347.6	gi|288561346|ref|YP_003424832.1|	-	1.2e-06	28.8	1.1	3.7	8.0	0.0	6.9	7	0	0	7	7	7	2	Domain	of	unknown	function	(DUF4399)
Invasin_D3	PF09134.10	gi|288561346|ref|YP_003424832.1|	-	8.4e-05	22.8	24.6	0.00043	20.5	3.8	25.0	21	5	5	26	26	24	7	Invasin,	domain	3
Chlam_PMP	PF02415.17	gi|288561346|ref|YP_003424832.1|	-	0.0013	19.1	0.6	0.018	15.5	0.1	46.6	51	2	0	51	51	50	10	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
A2M_BRD	PF07703.14	gi|288561346|ref|YP_003424832.1|	-	0.0031	17.9	22.6	0.013	15.8	1.5	6.1	5	1	0	5	5	5	2	Alpha-2-macroglobulin	bait	region	domain
MG4	PF17789.1	gi|288561346|ref|YP_003424832.1|	-	0.0046	17.1	32.6	0.43	10.8	0.0	10.8	9	1	0	9	9	9	1	Macroglobulin	domain	MG4
CE2_N	PF17996.1	gi|288561346|ref|YP_003424832.1|	-	0.0057	16.6	18.8	0.16	12.0	0.1	6.7	7	0	0	7	7	7	2	Carbohydrate	esterase	2	N-terminal
Cadherin_3	PF16184.5	gi|288561346|ref|YP_003424832.1|	-	0.013	15.5	0.4	0.84	9.7	0.1	4.1	4	0	0	4	4	4	0	Cadherin-like
PKD	PF00801.20	gi|288561346|ref|YP_003424832.1|	-	0.1	12.5	14.6	0.36	10.7	0.6	7.4	6	0	0	6	6	6	0	PKD	domain
V-set	PF07686.17	gi|288561346|ref|YP_003424832.1|	-	0.3	11.3	3.4	13	6.0	0.0	4.9	4	0	0	4	4	4	0	Immunoglobulin	V-set	domain
Mur_ligase_M	PF08245.12	gi|288561347|ref|YP_003424833.1|	-	8.1e-20	71.6	0.5	2.4e-09	37.5	0.5	3.4	3	0	0	3	3	3	3	Mur	ligase	middle	domain
Mur_ligase_C	PF02875.21	gi|288561347|ref|YP_003424833.1|	-	2.8e-08	33.9	0.0	7.4e-08	32.5	0.0	1.7	1	0	0	1	1	1	1	Mur	ligase	family,	glutamate	ligase	domain
2-Hacid_dh_C	PF02826.19	gi|288561347|ref|YP_003424833.1|	-	7.2e-05	22.2	0.0	0.00013	21.4	0.0	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Mur_ligase_M	PF08245.12	gi|288561348|ref|YP_003424834.1|	-	8.6e-15	55.2	1.1	2.1e-14	54.0	1.1	1.9	1	1	0	1	1	1	1	Mur	ligase	middle	domain
3HCDH_N	PF02737.18	gi|288561348|ref|YP_003424834.1|	-	0.0083	16.0	0.1	0.078	12.9	0.0	2.4	3	0	0	3	3	3	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
XdhC_C	PF13478.6	gi|288561348|ref|YP_003424834.1|	-	0.029	14.9	0.0	0.34	11.4	0.0	2.2	2	0	0	2	2	2	0	XdhC	Rossmann	domain
Pyr_redox_3	PF13738.6	gi|288561348|ref|YP_003424834.1|	-	0.046	13.0	0.2	0.66	9.2	0.0	2.6	3	0	0	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.14	gi|288561348|ref|YP_003424834.1|	-	0.059	12.6	0.0	0.67	9.1	0.0	2.4	3	0	0	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
THF_DHG_CYH_C	PF02882.19	gi|288561348|ref|YP_003424834.1|	-	0.12	11.7	1.0	2.4	7.4	0.0	2.5	3	0	0	3	3	3	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
NAD_binding_7	PF13241.6	gi|288561348|ref|YP_003424834.1|	-	0.13	12.8	0.0	0.36	11.3	0.0	1.8	1	0	0	1	1	1	0	Putative	NAD(P)-binding
Yae1_N	PF09811.9	gi|288561349|ref|YP_003424835.1|	-	0.11	12.2	3.7	0.25	11.1	3.7	1.5	1	0	0	1	1	1	0	Essential	protein	Yae1,	N	terminal
DUF3839	PF12943.7	gi|288561350|ref|YP_003424836.1|	-	0.062	12.7	0.1	0.079	12.4	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3839)
DUF521	PF04412.13	gi|288561351|ref|YP_003424837.1|	-	4.8e-159	529.4	0.2	5.3e-159	529.2	0.2	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF521)
Aconitase	PF00330.20	gi|288561351|ref|YP_003424837.1|	-	0.0024	17.0	0.4	0.0035	16.4	0.4	1.2	1	0	0	1	1	1	1	Aconitase	family	(aconitate	hydratase)
PALP	PF00291.25	gi|288561352|ref|YP_003424838.1|	-	1.2e-57	195.5	0.0	1.5e-57	195.3	0.0	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
DHHA1	PF02272.19	gi|288561353|ref|YP_003424839.1|	-	9.1e-14	52.0	1.1	2.8e-13	50.5	0.2	2.1	2	0	0	2	2	2	1	DHHA1	domain
DHH	PF01368.20	gi|288561353|ref|YP_003424839.1|	-	0.0031	17.7	0.2	0.0054	16.9	0.2	1.4	1	0	0	1	1	1	1	DHH	family
Ribosomal_S15	PF00312.22	gi|288561354|ref|YP_003424840.1|	-	9e-15	54.7	0.1	1.6e-14	53.9	0.0	1.4	2	0	0	2	2	2	1	Ribosomal	protein	S15
Ribosomal_S13_N	PF08069.12	gi|288561354|ref|YP_003424840.1|	-	9.2e-15	54.4	0.0	1.5e-14	53.8	0.0	1.4	1	0	0	1	1	1	1	Ribosomal	S13/S15	N-terminal	domain
Ham1p_like	PF01725.16	gi|288561355|ref|YP_003424841.1|	-	1e-48	165.7	0.0	1.2e-48	165.6	0.0	1.0	1	0	0	1	1	1	1	Ham1	family
Peptidase_M22	PF00814.25	gi|288561356|ref|YP_003424842.1|	-	1.3e-94	316.9	0.0	1.8e-94	316.5	0.0	1.1	1	0	0	1	1	1	1	Glycoprotease	family
RIO1	PF01163.22	gi|288561356|ref|YP_003424842.1|	-	8.2e-06	25.5	0.0	1.6e-05	24.6	0.0	1.3	1	0	0	1	1	1	1	RIO1	family
Pkinase	PF00069.25	gi|288561356|ref|YP_003424842.1|	-	1.2e-05	24.8	0.4	2.2e-05	24.0	0.4	1.4	1	0	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.17	gi|288561356|ref|YP_003424842.1|	-	0.0029	16.9	0.0	0.0043	16.4	0.0	1.3	1	0	0	1	1	1	1	Protein	tyrosine	kinase
Carbam_trans_N	PF02543.15	gi|288561356|ref|YP_003424842.1|	-	0.018	14.7	0.0	0.51	9.9	0.0	2.2	2	0	0	2	2	2	0	Carbamoyltransferase	N-terminus
Kdo	PF06293.14	gi|288561356|ref|YP_003424842.1|	-	0.046	13.1	0.0	0.092	12.1	0.0	1.5	1	0	0	1	1	1	0	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
LSM	PF01423.22	gi|288561358|ref|YP_003424844.1|	-	2.6e-08	33.4	1.2	7e-08	32.1	1.2	1.7	1	1	0	1	1	1	1	LSM	domain
DUF150_C	PF17384.2	gi|288561358|ref|YP_003424844.1|	-	0.0032	17.6	0.3	0.0033	17.5	0.3	1.1	1	0	0	1	1	1	1	RimP	C-terminal	SH3	domain
BPL_C	PF02237.17	gi|288561358|ref|YP_003424844.1|	-	0.0035	17.2	0.3	0.0044	16.9	0.3	1.1	1	0	0	1	1	1	1	Biotin	protein	ligase	C	terminal	domain
DUF1344	PF07076.11	gi|288561358|ref|YP_003424844.1|	-	0.066	13.1	0.1	0.12	12.3	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1344)
IZUMO	PF15005.6	gi|288561359|ref|YP_003424845.1|	-	0.025	15.1	0.6	0.026	15.0	0.6	1.0	1	0	0	1	1	1	0	Izumo	sperm-egg	fusion,	Ig	domain-associated
Erp_C	PF06780.11	gi|288561359|ref|YP_003424845.1|	-	0.077	13.0	0.9	0.077	13.0	0.9	1.0	1	0	0	1	1	1	0	Erp	protein	C-terminus
Suppressor_APC	PF11414.8	gi|288561359|ref|YP_003424845.1|	-	0.62	10.2	5.0	0.51	10.4	2.1	1.9	1	1	1	2	2	2	0	Adenomatous	polyposis	coli	tumour	suppressor	protein
DivIC	PF04977.15	gi|288561359|ref|YP_003424845.1|	-	1	9.2	4.0	1.9	8.3	2.8	1.7	1	1	1	2	2	2	0	Septum	formation	initiator
M	PF02370.16	gi|288561359|ref|YP_003424845.1|	-	6.4	7.7	9.4	5.3	7.9	1.2	2.3	2	0	0	2	2	2	0	M	protein	repeat
SurE	PF01975.17	gi|288561360|ref|YP_003424846.1|	-	1.4e-47	162.0	0.1	2.3e-47	161.3	0.0	1.3	2	0	0	2	2	2	1	Survival	protein	SurE
Thymidylat_synt	PF00303.19	gi|288561361|ref|YP_003424847.1|	-	2.2e-07	30.3	0.2	1.3e-06	27.7	0.2	1.9	1	1	0	1	1	1	1	Thymidylate	synthase
Mrr_cat	PF04471.12	gi|288561362|ref|YP_003424848.1|	-	6.2e-15	55.2	0.2	1.1e-14	54.5	0.2	1.4	1	0	0	1	1	1	1	Restriction	endonuclease
Mrr_cat_2	PF13156.6	gi|288561362|ref|YP_003424848.1|	-	0.0011	18.8	0.3	0.002	18.0	0.3	1.3	1	0	0	1	1	1	1	Restriction	endonuclease
UPF0697	PF15117.6	gi|288561362|ref|YP_003424848.1|	-	0.21	11.7	1.4	0.51	10.5	0.3	2.2	2	1	0	2	2	2	0	Uncharacterised	protein	family	UPF0697
Tox-HNH-HHH	PF15637.6	gi|288561362|ref|YP_003424848.1|	-	0.91	9.7	3.0	0.73	10.0	0.1	2.2	2	0	0	2	2	2	0	HNH/Endo	VII	superfamily	nuclease	toxin	with	a	HHH	motif
Aminotran_4	PF01063.19	gi|288561363|ref|YP_003424849.1|	-	1.4e-46	159.2	0.0	1.6e-46	158.9	0.0	1.0	1	0	0	1	1	1	1	Amino-transferase	class	IV
BacA	PF02673.18	gi|288561364|ref|YP_003424850.1|	-	1.4e-81	274.0	14.7	1.6e-81	273.8	14.7	1.0	1	0	0	1	1	1	1	Bacitracin	resistance	protein	BacA
TauE	PF01925.19	gi|288561364|ref|YP_003424850.1|	-	1.1e-05	25.3	14.8	1.6e-05	24.7	14.8	1.3	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
PLDc_N	PF13396.6	gi|288561364|ref|YP_003424850.1|	-	0.012	15.5	0.6	0.012	15.5	0.6	3.0	3	0	0	3	3	3	0	Phospholipase_D-nuclease	N-terminal
YwiC	PF14256.6	gi|288561364|ref|YP_003424850.1|	-	0.34	11.2	6.5	0.19	12.1	0.8	2.5	2	1	0	2	2	2	0	YwiC-like	protein
ThrE_2	PF12821.7	gi|288561364|ref|YP_003424850.1|	-	2.4	8.3	12.2	0.14	12.3	0.4	2.7	3	0	0	3	3	3	0	Threonine/Serine	exporter,	ThrE
ROK	PF00480.20	gi|288561365|ref|YP_003424851.1|	-	8.1e-06	25.5	1.2	0.00082	18.9	0.2	2.2	2	0	0	2	2	2	2	ROK	family
Acetate_kinase	PF00871.17	gi|288561365|ref|YP_003424851.1|	-	0.00069	18.4	0.1	0.0016	17.2	0.1	1.6	2	0	0	2	2	2	1	Acetokinase	family
BcrAD_BadFG	PF01869.20	gi|288561365|ref|YP_003424851.1|	-	0.0012	18.4	5.9	0.017	14.6	0.5	2.9	2	1	1	3	3	3	2	BadF/BadG/BcrA/BcrD	ATPase	family
IlvN	PF07991.12	gi|288561366|ref|YP_003424852.1|	-	2.4e-69	232.1	0.5	3.4e-69	231.6	0.5	1.2	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
IlvC	PF01450.19	gi|288561366|ref|YP_003424852.1|	-	1.6e-60	203.5	1.4	2.5e-60	203.0	1.4	1.3	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
NAD_binding_2	PF03446.15	gi|288561366|ref|YP_003424852.1|	-	1.6e-06	28.4	0.0	3.1e-06	27.5	0.0	1.4	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
AdoHcyase_NAD	PF00670.21	gi|288561366|ref|YP_003424852.1|	-	6.2e-06	26.4	0.6	1.2e-05	25.4	0.2	1.6	2	0	0	2	2	2	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.19	gi|288561366|ref|YP_003424852.1|	-	7.2e-06	25.5	0.0	1.2e-05	24.7	0.0	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.17	gi|288561366|ref|YP_003424852.1|	-	2.5e-05	24.8	0.1	5.8e-05	23.6	0.1	1.6	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
YfaZ	PF07437.11	gi|288561366|ref|YP_003424852.1|	-	0.068	12.8	0.3	0.14	11.8	0.0	1.6	2	0	0	2	2	2	0	YfaZ	precursor
ALS_ss_C	PF10369.9	gi|288561367|ref|YP_003424853.1|	-	3.5e-30	104.0	0.6	2.5e-29	101.3	0.1	2.1	2	0	0	2	2	2	1	Small	subunit	of	acetolactate	synthase
ACT	PF01842.25	gi|288561367|ref|YP_003424853.1|	-	1.2e-16	60.2	0.3	2.4e-16	59.2	0.3	1.5	1	0	0	1	1	1	1	ACT	domain
ACT_5	PF13710.6	gi|288561367|ref|YP_003424853.1|	-	1.7e-14	53.4	0.7	3e-14	52.6	0.3	1.7	2	0	0	2	2	2	1	ACT	domain
ACT_4	PF13291.6	gi|288561367|ref|YP_003424853.1|	-	0.00022	21.8	0.5	0.00038	21.0	0.5	1.4	1	0	0	1	1	1	1	ACT	domain
Saccharop_dh_N	PF04455.12	gi|288561367|ref|YP_003424853.1|	-	0.047	14.1	0.3	0.12	12.8	0.1	1.6	1	1	0	1	1	1	0	LOR/SDH	bifunctional	enzyme	conserved	region
ACT_6	PF13740.6	gi|288561367|ref|YP_003424853.1|	-	0.12	12.4	0.1	0.27	11.3	0.1	1.6	1	0	0	1	1	1	0	ACT	domain
TPP_enzyme_N	PF02776.18	gi|288561368|ref|YP_003424854.1|	-	1.4e-57	194.1	0.0	1.4e-56	190.8	0.0	2.2	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.22	gi|288561368|ref|YP_003424854.1|	-	9.5e-50	167.9	1.7	1.4e-49	167.3	0.5	2.0	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	central	domain
TPP_enzyme_C	PF02775.21	gi|288561368|ref|YP_003424854.1|	-	1.7e-48	164.3	0.4	6.6e-48	162.4	0.0	2.1	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
GARS_A	PF01071.19	gi|288561369|ref|YP_003424855.1|	-	9.5e-66	221.3	0.5	1.7e-65	220.5	0.5	1.4	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
GARS_N	PF02844.15	gi|288561369|ref|YP_003424855.1|	-	9.2e-25	87.3	0.2	1.8e-24	86.3	0.2	1.5	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	N	domain
GARS_C	PF02843.16	gi|288561369|ref|YP_003424855.1|	-	8.8e-15	54.8	0.1	2.8e-14	53.1	0.1	1.9	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	C	domain
ATP-grasp_3	PF02655.14	gi|288561369|ref|YP_003424855.1|	-	2.9e-07	30.7	0.0	6.1e-07	29.6	0.0	1.6	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_ST	PF14397.6	gi|288561369|ref|YP_003424855.1|	-	5.4e-05	22.6	0.1	0.00089	18.6	0.1	2.2	2	0	0	2	2	2	1	Sugar-transfer	associated	ATP-grasp
ATP-grasp_4	PF13535.6	gi|288561369|ref|YP_003424855.1|	-	9.7e-05	22.0	0.0	0.00054	19.6	0.1	2.0	2	0	0	2	2	2	1	ATP-grasp	domain
GSH-S_ATP	PF02955.16	gi|288561369|ref|YP_003424855.1|	-	0.018	14.5	0.0	0.031	13.7	0.0	1.4	1	0	0	1	1	1	0	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
GSP_synth	PF03738.14	gi|288561369|ref|YP_003424855.1|	-	0.027	13.7	0.0	2.8	7.0	0.0	2.1	2	0	0	2	2	2	0	Glutathionylspermidine	synthase	preATP-grasp
CPSase_L_D2	PF02786.17	gi|288561369|ref|YP_003424855.1|	-	0.077	12.5	0.1	0.18	11.3	0.1	1.6	2	0	0	2	2	2	0	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
LAL_C2	PF18603.1	gi|288561369|ref|YP_003424855.1|	-	0.13	12.4	0.9	0.37	11.0	0.2	2.2	2	0	0	2	2	2	0	L-amino	acid	ligase	C-terminal	domain	2
CAF1	PF04857.20	gi|288561370|ref|YP_003424856.1|	-	3.6	6.7	9.5	0.69	9.0	5.5	1.6	1	1	0	2	2	2	0	CAF1	family	ribonuclease
OTCace	PF00185.24	gi|288561371|ref|YP_003424857.1|	-	9.8e-63	210.9	0.1	1.4e-62	210.4	0.1	1.2	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
OTCace_N	PF02729.21	gi|288561371|ref|YP_003424857.1|	-	5.6e-45	153.0	0.0	8.5e-45	152.4	0.0	1.3	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
NAD_binding_7	PF13241.6	gi|288561371|ref|YP_003424857.1|	-	0.024	15.1	0.2	0.63	10.5	0.0	2.3	1	1	1	2	2	2	0	Putative	NAD(P)-binding
TPR_1	PF00515.28	gi|288561372|ref|YP_003424858.1|	-	5.8e-31	105.0	21.2	1.1e-07	31.3	0.1	6.4	6	0	0	6	6	6	6	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|288561372|ref|YP_003424858.1|	-	3.9e-26	89.0	17.9	1.8e-05	24.5	0.1	7.1	7	0	0	7	7	7	5	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|288561372|ref|YP_003424858.1|	-	4.2e-17	60.9	20.7	0.00017	21.6	0.4	6.4	6	0	0	6	6	6	4	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|288561372|ref|YP_003424858.1|	-	4.2e-16	59.0	8.6	1.1e-05	25.6	0.8	4.4	2	1	2	4	4	4	4	Tetratricopeptide	repeat
TPR_11	PF13414.6	gi|288561372|ref|YP_003424858.1|	-	1.3e-14	53.6	22.9	0.00017	21.2	0.0	6.1	2	1	3	5	5	5	5	TPR	repeat
TPR_16	PF13432.6	gi|288561372|ref|YP_003424858.1|	-	2.6e-14	53.6	0.0	6.4e-05	23.5	0.0	5.4	4	2	2	6	6	6	3	Tetratricopeptide	repeat
TPR_9	PF13371.6	gi|288561372|ref|YP_003424858.1|	-	7.4e-14	51.7	0.0	0.0028	17.8	0.0	3.5	2	1	0	3	3	3	3	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|288561372|ref|YP_003424858.1|	-	2.3e-13	50.5	5.9	3.7e-06	27.3	0.4	3.8	4	0	0	4	4	3	3	Tetratricopeptide	repeat
TPR_17	PF13431.6	gi|288561372|ref|YP_003424858.1|	-	8.7e-11	41.4	12.8	0.016	15.6	0.3	6.6	5	2	1	6	6	6	3	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|288561372|ref|YP_003424858.1|	-	2.9e-10	40.3	7.4	2.9e-06	27.4	2.2	3.3	2	1	0	3	3	3	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_6	PF13174.6	gi|288561372|ref|YP_003424858.1|	-	4.4e-10	39.5	6.3	0.021	15.4	0.0	6.6	7	0	0	7	7	6	1	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|288561372|ref|YP_003424858.1|	-	1.1e-08	35.2	0.3	2.5	9.1	0.0	6.1	5	2	2	7	7	6	2	Tetratricopeptide	repeat
TPR_7	PF13176.6	gi|288561372|ref|YP_003424858.1|	-	6.2e-08	32.1	9.1	0.3	11.2	0.2	6.0	5	1	1	6	6	6	2	Tetratricopeptide	repeat
DUF5113	PF17140.4	gi|288561372|ref|YP_003424858.1|	-	2.1e-06	27.6	9.6	0.025	14.4	0.1	4.4	2	2	3	5	5	5	2	Domain	of	unknown	function	(DUF5113)
DUF3856	PF12968.7	gi|288561372|ref|YP_003424858.1|	-	0.00025	21.1	3.4	0.21	11.7	0.1	4.2	2	1	2	4	4	4	1	Domain	of	Unknown	Function	(DUF3856)
Coatomer_E	PF04733.14	gi|288561372|ref|YP_003424858.1|	-	0.0023	17.4	0.3	0.0023	17.4	0.3	3.0	3	1	0	4	4	4	1	Coatomer	epsilon	subunit
NTase_sub_bind	PF08780.11	gi|288561372|ref|YP_003424858.1|	-	0.0026	17.7	5.5	0.94	9.4	0.1	4.1	3	1	0	3	3	3	1	Nucleotidyltransferase	substrate	binding	protein	like
Fis1_TPR_C	PF14853.6	gi|288561372|ref|YP_003424858.1|	-	0.0041	17.2	10.0	0.72	10.0	0.1	4.5	4	1	1	5	5	5	2	Fis1	C-terminal	tetratricopeptide	repeat
TPR_10	PF13374.6	gi|288561372|ref|YP_003424858.1|	-	0.012	15.4	8.5	29	4.7	0.0	5.9	6	0	0	6	6	6	0	Tetratricopeptide	repeat
TPR_21	PF09976.9	gi|288561372|ref|YP_003424858.1|	-	0.027	14.2	4.2	0.53	10.0	0.1	3.7	4	1	0	5	5	4	0	Tetratricopeptide	repeat-like	domain
Urocanase	PF01175.18	gi|288561372|ref|YP_003424858.1|	-	0.035	13.8	0.2	0.09	12.4	0.2	1.7	1	0	0	1	1	1	0	Urocanase	Rossmann-like	domain
NARP1	PF12569.8	gi|288561372|ref|YP_003424858.1|	-	0.072	12.0	13.3	0.31	9.9	0.1	3.4	1	1	3	4	4	4	0	NMDA	receptor-regulated	protein	1
Mei5_like	PF17021.5	gi|288561372|ref|YP_003424858.1|	-	0.081	13.0	4.5	0.064	13.3	1.2	2.5	2	2	0	2	2	2	0	Putative	double-strand	recombination	repair-like
HTH_Bact	PF18768.1	gi|288561372|ref|YP_003424858.1|	-	0.3	10.7	5.5	15	5.2	0.8	4.2	3	1	0	3	3	3	0	Helix-turn-helix	bacterial	domain
MIT	PF04212.18	gi|288561372|ref|YP_003424858.1|	-	0.58	10.3	22.5	0.71	10.0	0.2	5.7	5	3	1	6	6	5	0	MIT	(microtubule	interacting	and	transport)	domain
tRNA-synt_1d	PF00750.19	gi|288561373|ref|YP_003424859.1|	-	2.9e-36	125.2	0.5	4.1e-36	124.6	0.5	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(R)
DALR_1	PF05746.15	gi|288561373|ref|YP_003424859.1|	-	5.6e-32	110.4	0.3	1.8e-31	108.8	0.3	1.9	1	0	0	1	1	1	1	DALR	anticodon	binding	domain
Arg_tRNA_synt_N	PF03485.16	gi|288561373|ref|YP_003424859.1|	-	1.2e-19	70.6	0.9	1.1e-18	67.6	0.4	2.7	3	0	0	3	3	3	1	Arginyl	tRNA	synthetase	N	terminal	domain
tRNA-synt_1f	PF01921.18	gi|288561373|ref|YP_003424859.1|	-	7.1e-06	25.2	0.0	0.094	11.6	0.0	3.1	2	1	1	3	3	3	2	tRNA	synthetases	class	I	(K)
tRNA-synt_1g	PF09334.11	gi|288561373|ref|YP_003424859.1|	-	0.00012	20.9	0.1	0.43	9.3	0.0	4.0	3	1	1	4	4	4	1	tRNA	synthetases	class	I	(M)
tRNA-synt_1e	PF01406.19	gi|288561373|ref|YP_003424859.1|	-	0.00093	18.6	0.0	0.0017	17.7	0.0	1.5	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1	PF00133.22	gi|288561373|ref|YP_003424859.1|	-	0.046	12.0	0.0	0.097	10.9	0.0	1.5	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Peptidase_S24	PF00717.23	gi|288561374|ref|YP_003424860.1|	-	7.3e-07	29.1	0.1	1.1e-06	28.5	0.1	1.4	1	0	0	1	1	1	1	Peptidase	S24-like
Flavoprotein	PF02441.19	gi|288561374|ref|YP_003424860.1|	-	0.082	12.6	0.0	0.15	11.8	0.0	1.4	1	1	1	2	2	2	0	Flavoprotein
DNA_ligase_OB	PF03120.16	gi|288561374|ref|YP_003424860.1|	-	0.089	12.7	1.1	0.11	12.3	0.1	1.7	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	OB-fold	domain
ILVD_EDD	PF00920.21	gi|288561375|ref|YP_003424861.1|	-	1.6e-212	706.8	3.6	1.8e-212	706.6	3.6	1.0	1	0	0	1	1	1	1	Dehydratase	family
Cupin_2	PF07883.11	gi|288561376|ref|YP_003424862.1|	-	3.4e-09	36.3	0.0	4.1e-09	36.0	0.0	1.2	1	0	0	1	1	1	1	Cupin	domain
AraC_binding	PF02311.19	gi|288561376|ref|YP_003424862.1|	-	1.1e-06	28.6	0.0	1.3e-06	28.4	0.0	1.1	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
Cupin_3	PF05899.12	gi|288561376|ref|YP_003424862.1|	-	0.00032	20.3	0.0	0.00042	20.0	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF861)
Cupin_6	PF12852.7	gi|288561376|ref|YP_003424862.1|	-	0.0089	15.8	0.0	0.011	15.5	0.0	1.1	1	0	0	1	1	1	1	Cupin
Cupin_1	PF00190.22	gi|288561376|ref|YP_003424862.1|	-	0.0098	15.5	0.0	0.011	15.4	0.0	1.2	1	1	0	1	1	1	1	Cupin
Asp_Arg_Hydrox	PF05118.15	gi|288561376|ref|YP_003424862.1|	-	0.013	15.4	0.0	0.018	14.9	0.0	1.2	1	0	0	1	1	1	0	Aspartyl/Asparaginyl	beta-hydroxylase
AraC_N	PF06719.13	gi|288561376|ref|YP_003424862.1|	-	0.032	13.9	0.0	0.04	13.6	0.0	1.1	1	0	0	1	1	1	0	AraC-type	transcriptional	regulator	N-terminus
ARD	PF03079.14	gi|288561376|ref|YP_003424862.1|	-	0.057	13.6	0.0	0.069	13.3	0.0	1.3	1	1	0	1	1	1	0	ARD/ARD'	family
DUF2777	PF10949.8	gi|288561376|ref|YP_003424862.1|	-	0.19	11.4	0.0	12	5.5	0.0	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2777)
Prismane	PF03063.20	gi|288561377|ref|YP_003424863.1|	-	1.3e-117	393.6	0.4	9.6e-101	338.0	0.0	2.0	1	1	1	2	2	2	2	Prismane/CO	dehydrogenase	family
TrmB	PF01978.19	gi|288561378|ref|YP_003424864.1|	-	2e-18	66.1	0.0	3.6e-18	65.2	0.0	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_36	PF13730.6	gi|288561378|ref|YP_003424864.1|	-	0.012	15.6	0.1	0.13	12.3	0.0	2.5	3	0	0	3	3	3	0	Helix-turn-helix	domain
DUF16	PF01519.16	gi|288561378|ref|YP_003424864.1|	-	0.015	15.7	1.2	0.037	14.5	1.2	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF16
PadR	PF03551.14	gi|288561378|ref|YP_003424864.1|	-	0.017	15.1	0.0	0.051	13.5	0.0	1.8	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
MarR	PF01047.22	gi|288561378|ref|YP_003424864.1|	-	0.11	12.4	0.0	0.32	11.0	0.0	1.7	1	0	0	1	1	1	0	MarR	family
AMP-binding	PF00501.28	gi|288561379|ref|YP_003424865.1|	-	0.064	11.8	0.0	0.091	11.3	0.0	1.2	1	0	0	1	1	1	0	AMP-binding	enzyme
FixS	PF03597.15	gi|288561380|ref|YP_003424866.1|	-	0.3	10.8	1.1	0.56	10.0	0.0	1.9	2	0	0	2	2	2	0	Cytochrome	oxidase	maturation	protein	cbb3-type
Glyco_trans_1_4	PF13692.6	gi|288561382|ref|YP_003424868.1|	-	6e-07	30.0	0.0	1.3e-06	28.8	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glycos_transf_1	PF00534.20	gi|288561382|ref|YP_003424868.1|	-	7.8e-06	25.5	0.1	2.3e-05	24.0	0.0	1.9	1	1	1	2	2	2	1	Glycosyl	transferases	group	1
Glyco_transf_28	PF03033.20	gi|288561382|ref|YP_003424868.1|	-	5.1e-05	23.3	0.2	8.6e-05	22.6	0.2	1.3	1	0	0	1	1	1	1	Glycosyltransferase	family	28	N-terminal	domain
Glyco_trans_4_2	PF13477.6	gi|288561382|ref|YP_003424868.1|	-	0.0081	16.2	0.0	0.021	14.9	0.0	1.7	1	1	0	1	1	1	1	Glycosyl	transferase	4-like
Mito_fiss_Elm1	PF06258.11	gi|288561382|ref|YP_003424868.1|	-	0.02	14.0	0.0	0.032	13.4	0.0	1.3	1	0	0	1	1	1	0	Mitochondrial	fission	ELM1
CmcI	PF04989.12	gi|288561382|ref|YP_003424868.1|	-	0.16	11.7	0.0	0.54	9.9	0.0	1.8	2	0	0	2	2	2	0	Cephalosporin	hydroxylase
Ribonuclease	PF00545.20	gi|288561383|ref|YP_003424869.1|	-	4.6e-24	85.0	0.0	6.4e-24	84.5	0.0	1.2	1	0	0	1	1	1	1	ribonuclease
Barstar	PF01337.18	gi|288561384|ref|YP_003424870.1|	-	2.2e-13	50.0	0.1	3.1e-13	49.6	0.1	1.3	1	1	0	1	1	1	1	Barstar	(barnase	inhibitor)
Sulfotransfer_1	PF00685.27	gi|288561384|ref|YP_003424870.1|	-	0.054	13.0	0.1	0.06	12.8	0.1	1.1	1	0	0	1	1	1	0	Sulfotransferase	domain
tRNA-Thr_ED	PF08915.11	gi|288561385|ref|YP_003424871.1|	-	2.2e-54	183.2	0.8	4.5e-54	182.2	0.8	1.6	1	0	0	1	1	1	1	Archaea-specific	editing	domain	of	threonyl-tRNA	synthetase
HGTP_anticodon	PF03129.20	gi|288561385|ref|YP_003424871.1|	-	2e-24	85.5	1.5	4.8e-24	84.3	1.5	1.7	1	0	0	1	1	1	1	Anticodon	binding	domain
tRNA-synt_2b	PF00587.25	gi|288561385|ref|YP_003424871.1|	-	2e-15	57.2	0.0	5.8e-15	55.7	0.0	1.8	1	1	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
DUF3189	PF11385.8	gi|288561385|ref|YP_003424871.1|	-	0.061	13.2	0.0	0.14	12.0	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3189)
Cons_hypoth698	PF03601.14	gi|288561386|ref|YP_003424872.1|	-	2.6e-82	276.2	25.2	3e-82	275.9	25.2	1.0	1	0	0	1	1	1	1	Conserved	hypothetical	protein	698
KdgT	PF03812.13	gi|288561386|ref|YP_003424872.1|	-	7.8e-05	22.1	14.2	7.8e-05	22.1	14.2	3.3	2	1	1	3	3	3	2	2-keto-3-deoxygluconate	permease
FeoB_associated	PF12669.7	gi|288561386|ref|YP_003424872.1|	-	1.9	9.0	0.0	1.9	9.0	0.0	4.6	6	0	0	6	6	6	0	FeoB-associated	Cys-rich	membrane	protein
SLATT_6	PF18169.1	gi|288561386|ref|YP_003424872.1|	-	2.1	7.9	9.6	2	8.0	0.6	2.6	2	0	0	2	2	2	0	SMODS	and	SLOG-associating	2TM	effector	domain	6
Fae	PF08714.11	gi|288561387|ref|YP_003424873.1|	-	3.9e-66	221.9	0.0	7.8e-66	220.9	0.0	1.5	1	0	0	1	1	1	1	Formaldehyde-activating	enzyme	(Fae)
OMPdecase	PF00215.24	gi|288561387|ref|YP_003424873.1|	-	1.1e-24	87.2	0.4	1.8e-24	86.6	0.4	1.3	1	0	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
FMN_dh	PF01070.18	gi|288561387|ref|YP_003424873.1|	-	0.0069	15.4	0.1	0.011	14.8	0.1	1.3	1	0	0	1	1	1	1	FMN-dependent	dehydrogenase
PcrB	PF01884.17	gi|288561387|ref|YP_003424873.1|	-	0.0078	15.7	2.3	1.9	7.9	0.2	2.3	2	0	0	2	2	2	2	PcrB	family
Ribul_P_3_epim	PF00834.19	gi|288561387|ref|YP_003424873.1|	-	0.04	13.3	0.3	0.087	12.2	0.3	1.7	1	1	0	1	1	1	0	Ribulose-phosphate	3	epimerase	family
Zn_ribbon_2	PF12674.7	gi|288561388|ref|YP_003424874.1|	-	2.2e-27	95.5	0.2	2.6e-27	95.3	0.2	1.0	1	0	0	1	1	1	1	Putative	zinc	ribbon	domain
PknG_rubred	PF16919.5	gi|288561388|ref|YP_003424874.1|	-	0.0097	16.1	0.3	0.016	15.4	0.3	1.4	1	0	0	1	1	1	1	Protein	kinase	G	rubredoxin	domain
GP67	PF17634.2	gi|288561388|ref|YP_003424874.1|	-	0.046	14.1	0.6	0.081	13.3	0.6	1.4	1	0	0	1	1	1	0	Gene	product	67
DUF3450	PF11932.8	gi|288561389|ref|YP_003424875.1|	-	0.00011	21.6	1.5	0.00011	21.6	1.5	2.5	2	1	1	3	3	3	1	Protein	of	unknown	function	(DUF3450)
TMF_DNA_bd	PF12329.8	gi|288561389|ref|YP_003424875.1|	-	0.00058	19.8	3.3	0.00058	19.8	3.3	3.7	2	1	2	4	4	4	1	TATA	element	modulatory	factor	1	DNA	binding
Fez1	PF06818.15	gi|288561389|ref|YP_003424875.1|	-	0.00091	19.7	5.9	0.00091	19.7	5.9	2.6	1	1	1	2	2	2	1	Fez1
FPP	PF05911.11	gi|288561389|ref|YP_003424875.1|	-	0.0023	16.2	16.1	0.0032	15.7	16.1	1.1	1	0	0	1	1	1	1	Filament-like	plant	protein,	long	coiled-coil
WEMBL	PF05701.11	gi|288561389|ref|YP_003424875.1|	-	0.0034	16.2	8.1	0.0034	16.2	8.1	1.4	2	0	0	2	2	2	1	Weak	chloroplast	movement	under	blue	light
DUF1664	PF07889.12	gi|288561389|ref|YP_003424875.1|	-	0.024	14.7	7.9	0.14	12.2	1.2	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1664)
Exonuc_VII_L	PF02601.15	gi|288561389|ref|YP_003424875.1|	-	0.026	14.1	4.1	0.043	13.4	4.1	1.4	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
Spc7	PF08317.11	gi|288561389|ref|YP_003424875.1|	-	0.042	12.7	18.1	0.11	11.3	3.2	2.5	2	1	1	3	3	3	0	Spc7	kinetochore	protein
TolA_bind_tri	PF16331.5	gi|288561389|ref|YP_003424875.1|	-	0.066	13.3	6.6	0.12	12.5	0.7	3.1	1	1	1	2	2	2	0	TolA	binding	protein	trimerisation
Tfb5	PF06331.12	gi|288561389|ref|YP_003424875.1|	-	0.082	12.9	4.5	0.13	12.3	2.3	2.6	1	1	1	2	2	2	0	Transcription	factor	TFIIH	complex	subunit	Tfb5
MscS_porin	PF12795.7	gi|288561389|ref|YP_003424875.1|	-	0.22	11.1	12.2	14	5.1	7.2	2.8	2	1	1	3	3	3	0	Mechanosensitive	ion	channel	porin	domain
HMMR_N	PF15905.5	gi|288561389|ref|YP_003424875.1|	-	0.26	10.7	19.0	0.2	11.1	15.1	2.4	2	1	1	3	3	3	0	Hyaluronan	mediated	motility	receptor	N-terminal
HIP1_clath_bdg	PF16515.5	gi|288561389|ref|YP_003424875.1|	-	0.3	11.7	10.8	0.69	10.6	0.6	2.8	1	1	1	2	2	2	0	Clathrin-binding	domain	of	Huntingtin-interacting	protein	1
NPV_P10	PF05531.12	gi|288561389|ref|YP_003424875.1|	-	0.3	11.6	13.1	0.062	13.8	2.1	3.4	1	1	3	4	4	4	0	Nucleopolyhedrovirus	P10	protein
DUF4407	PF14362.6	gi|288561389|ref|YP_003424875.1|	-	0.35	10.2	2.8	1.5	8.1	2.8	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
Prominin	PF05478.11	gi|288561389|ref|YP_003424875.1|	-	0.76	7.7	16.0	1.1	7.1	16.0	1.2	1	0	0	1	1	1	0	Prominin
ATG16	PF08614.11	gi|288561389|ref|YP_003424875.1|	-	1.1	9.4	21.2	0.64	10.2	1.0	2.6	2	1	1	3	3	3	0	Autophagy	protein	16	(ATG16)
DUF3461	PF11944.8	gi|288561389|ref|YP_003424875.1|	-	2.2	8.5	13.5	0.34	11.0	5.9	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3461)
CENP-F_leu_zip	PF10473.9	gi|288561389|ref|YP_003424875.1|	-	2.7	8.0	18.6	0.91	9.5	14.9	2.2	2	1	0	2	2	1	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Laminin_II	PF06009.12	gi|288561389|ref|YP_003424875.1|	-	2.9	7.9	13.0	2.6	8.0	8.7	2.4	1	1	1	2	2	2	0	Laminin	Domain	II
UPF0242	PF06785.11	gi|288561389|ref|YP_003424875.1|	-	6.2	6.9	20.4	1.9	8.6	16.5	2.1	2	1	0	2	2	2	0	Uncharacterised	protein	family	(UPF0242)	N-terminus
Atg14	PF10186.9	gi|288561389|ref|YP_003424875.1|	-	6.5	5.7	12.3	2.3	7.2	8.0	2.3	2	1	0	2	2	2	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
SlyX	PF04102.12	gi|288561389|ref|YP_003424875.1|	-	7.3	7.3	8.4	4.6	7.9	0.1	3.5	2	1	1	3	3	2	0	SlyX
DUF948	PF06103.11	gi|288561389|ref|YP_003424875.1|	-	8.1	6.8	7.2	1.9	8.8	2.1	2.5	3	0	0	3	3	2	0	Bacterial	protein	of	unknown	function	(DUF948)
Cna_B	PF05738.13	gi|288561390|ref|YP_003424876.1|	-	5.3e-207	671.1	130.4	2.3e-22	79.3	4.0	16.7	14	0	0	14	14	12	11	Cna	protein	B-type	domain
DUF11	PF01345.18	gi|288561390|ref|YP_003424876.1|	-	2.1e-108	354.8	135.4	4.6e-12	46.1	0.3	20.4	18	0	0	18	18	18	17	Domain	of	unknown	function	DUF11
Beta_helix	PF13229.6	gi|288561390|ref|YP_003424876.1|	-	9.5e-08	32.1	66.8	5.4e-06	26.3	38.8	30.0	10	8	21	34	34	17	12	Right	handed	beta	helix	region
GH114_assoc	PF14741.6	gi|288561390|ref|YP_003424876.1|	-	1.4e-06	28.5	56.9	0.25	11.6	0.8	10.8	11	0	0	11	11	11	5	N-terminal	glycosyl-hydrolase-114-associated	domain
FlgD_ig	PF13860.6	gi|288561390|ref|YP_003424876.1|	-	9e-06	25.5	5.3	0.076	12.9	0.6	4.0	2	0	0	2	2	2	2	FlgD	Ig-like	domain
Chlam_OMP6	PF03504.13	gi|288561390|ref|YP_003424876.1|	-	9.8e-05	22.6	2.1	0.44	10.9	0.1	4.8	3	0	0	3	3	3	1	Chlamydia	cysteine-rich	outer	membrane	protein	6
MG2	PF01835.19	gi|288561390|ref|YP_003424876.1|	-	0.008	16.6	0.6	19	5.8	0.0	4.9	4	0	0	4	4	3	0	MG2	domain
DUF4516	PF14990.6	gi|288561390|ref|YP_003424876.1|	-	0.012	15.3	1.6	3e+02	1.2	0.0	6.2	7	0	0	7	7	7	0	Domain	of	unknown	function	(DUF4516)
bMG10	PF17973.1	gi|288561390|ref|YP_003424876.1|	-	0.017	15.3	7.2	1.8	8.7	0.0	7.0	7	0	0	7	7	6	0	Bacterial	Alpha-2-macroglobulin	MG10	domain
Adeno_E1B_55K	PF01696.17	gi|288561390|ref|YP_003424876.1|	-	0.079	11.6	10.8	0.025	13.3	0.8	3.5	2	1	1	3	3	3	0	Adenovirus	EB1	55K	protein	/	large	t-antigen
DUF3244	PF11589.8	gi|288561390|ref|YP_003424876.1|	-	0.081	13.0	19.9	1.6	8.8	2.8	7.6	5	0	0	5	5	5	0	Domain	of	unknown	function	(DUF3244)
DUF5316	PF17247.2	gi|288561390|ref|YP_003424876.1|	-	3	7.9	18.4	59	3.8	0.1	6.8	7	0	0	7	7	7	0	Family	of	unknown	function	(DUF5316)
FMN_red	PF03358.15	gi|288561391|ref|YP_003424877.1|	-	1.6e-35	122.1	0.0	2e-35	121.8	0.0	1.1	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.17	gi|288561391|ref|YP_003424877.1|	-	1.4e-10	41.2	0.0	1.8e-10	40.9	0.0	1.2	1	0	0	1	1	1	1	Flavodoxin-like	fold
Flavodoxin_5	PF12724.7	gi|288561391|ref|YP_003424877.1|	-	0.023	14.9	0.0	0.036	14.3	0.0	1.2	1	0	0	1	1	1	0	Flavodoxin	domain
Polysacc_synt	PF01943.17	gi|288561392|ref|YP_003424878.1|	-	1.1e-35	123.4	19.2	1.1e-35	123.4	19.2	3.2	1	1	1	2	2	2	1	Polysaccharide	biosynthesis	protein
Polysacc_synt_C	PF14667.6	gi|288561392|ref|YP_003424878.1|	-	6.2e-23	81.5	25.6	6.2e-23	81.5	25.6	4.4	3	2	2	5	5	5	2	Polysaccharide	biosynthesis	C-terminal	domain
Polysacc_synt_3	PF13440.6	gi|288561392|ref|YP_003424878.1|	-	1.2e-19	70.7	14.7	1.2e-19	70.7	14.7	2.5	2	1	0	2	2	2	1	Polysaccharide	biosynthesis	protein
MurJ	PF03023.14	gi|288561392|ref|YP_003424878.1|	-	2e-17	63.0	33.9	2.5e-14	52.8	28.9	2.2	2	0	0	2	2	2	2	Lipid	II	flippase	MurJ
MatE	PF01554.18	gi|288561392|ref|YP_003424878.1|	-	6e-12	45.5	33.4	2.9e-08	33.5	17.0	4.0	3	2	1	4	4	4	2	MatE
T2SSF	PF00482.23	gi|288561392|ref|YP_003424878.1|	-	0.16	11.9	0.1	0.16	11.9	0.1	4.0	6	0	0	6	6	6	0	Type	II	secretion	system	(T2SS),	protein	F
SLATT_4	PF18186.1	gi|288561392|ref|YP_003424878.1|	-	0.96	9.1	3.4	0.34	10.6	0.1	2.0	2	0	0	2	2	2	0	SMODS	and	SLOG-associating	2TM	effector	domain	family	4
TOBE	PF03459.17	gi|288561393|ref|YP_003424879.1|	-	4.8e-11	42.8	0.0	1.4e-10	41.3	0.0	1.7	2	0	0	2	2	2	1	TOBE	domain
HTH_1	PF00126.27	gi|288561393|ref|YP_003424879.1|	-	9.7e-09	35.1	0.0	1.7e-08	34.3	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
DUF2089	PF09862.9	gi|288561393|ref|YP_003424879.1|	-	0.00024	21.1	0.8	0.00044	20.3	0.1	1.8	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF2089)
HTH_30	PF13556.6	gi|288561393|ref|YP_003424879.1|	-	0.00082	19.1	0.2	0.0014	18.4	0.2	1.4	1	0	0	1	1	1	1	PucR	C-terminal	helix-turn-helix	domain
HTH_11	PF08279.12	gi|288561393|ref|YP_003424879.1|	-	0.0011	18.8	0.9	0.063	13.2	0.2	2.6	2	0	0	2	2	2	1	HTH	domain
HTH_29	PF13551.6	gi|288561393|ref|YP_003424879.1|	-	0.011	15.7	0.0	0.02	14.9	0.0	1.4	1	0	0	1	1	1	0	Winged	helix-turn	helix
HTH_45	PF14947.6	gi|288561393|ref|YP_003424879.1|	-	0.024	14.6	1.2	0.085	12.8	1.2	2.0	1	1	0	1	1	1	0	Winged	helix-turn-helix
DUF4872	PF16169.5	gi|288561393|ref|YP_003424879.1|	-	0.028	14.2	0.0	0.04	13.7	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4872)
Ribosomal_S8	PF00410.19	gi|288561393|ref|YP_003424879.1|	-	0.069	13.1	0.7	0.22	11.5	0.1	1.9	2	0	0	2	2	2	0	Ribosomal	protein	S8
Fer4	PF00037.27	gi|288561394|ref|YP_003424880.1|	-	0.011	15.5	1.3	0.014	15.2	1.3	1.2	1	0	0	1	1	1	0	4Fe-4S	binding	domain
IGPD	PF00475.18	gi|288561395|ref|YP_003424881.1|	-	2.2e-57	193.4	1.3	3.4e-57	192.8	1.3	1.3	1	0	0	1	1	1	1	Imidazoleglycerol-phosphate	dehydratase
AAA_16	PF13191.6	gi|288561396|ref|YP_003424882.1|	-	1.7e-13	51.3	0.0	3.9e-13	50.2	0.0	1.6	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_22	PF13401.6	gi|288561396|ref|YP_003424882.1|	-	0.00014	22.2	0.0	0.00099	19.4	0.0	2.4	2	1	0	2	2	2	1	AAA	domain
DUF2791	PF10923.8	gi|288561396|ref|YP_003424882.1|	-	0.00064	18.7	1.9	0.0045	15.9	0.4	2.2	2	0	0	2	2	2	1	P-loop	Domain	of	unknown	function	(DUF2791)
DUF815	PF05673.13	gi|288561396|ref|YP_003424882.1|	-	0.002	17.3	0.1	0.0052	16.0	0.0	1.7	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF815)
NTPase_1	PF03266.15	gi|288561396|ref|YP_003424882.1|	-	0.0023	17.9	0.3	0.01	15.8	0.0	2.1	2	0	0	2	2	2	1	NTPase
DEAD	PF00270.29	gi|288561396|ref|YP_003424882.1|	-	0.0031	17.3	0.2	0.21	11.4	0.0	2.6	2	1	1	3	3	3	1	DEAD/DEAH	box	helicase
AAA	PF00004.29	gi|288561396|ref|YP_003424882.1|	-	0.0065	16.9	1.1	0.056	13.9	0.1	3.0	2	1	1	3	3	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.12	gi|288561396|ref|YP_003424882.1|	-	0.011	15.5	0.1	0.029	14.1	0.0	1.8	2	0	0	2	2	2	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
Sigma54_activat	PF00158.26	gi|288561396|ref|YP_003424882.1|	-	0.074	12.7	0.0	0.13	11.9	0.0	1.5	1	0	0	1	1	1	0	Sigma-54	interaction	domain
Phage_connect_1	PF05135.13	gi|288561396|ref|YP_003424882.1|	-	0.083	13.4	0.5	1.5	9.3	0.1	2.6	2	0	0	2	2	2	0	Phage	gp6-like	head-tail	connector	protein
AAA_5	PF07728.14	gi|288561396|ref|YP_003424882.1|	-	0.13	12.3	0.0	0.59	10.1	0.0	2.1	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
Zn-ribbon_8	PF09723.10	gi|288561397|ref|YP_003424883.1|	-	3e-05	24.0	4.6	0.0036	17.4	0.5	3.3	3	0	0	3	3	3	1	Zinc	ribbon	domain
DZR	PF12773.7	gi|288561397|ref|YP_003424883.1|	-	0.00011	22.1	1.4	0.13	12.4	1.6	2.7	2	2	0	2	2	2	1	Double	zinc	ribbon
zf_Rg	PF17915.1	gi|288561397|ref|YP_003424883.1|	-	0.0019	17.6	8.6	0.1	12.0	0.4	3.3	2	1	1	3	3	3	2	Reverse	gyrase	zinc	finger
zinc-ribbons_6	PF07191.12	gi|288561397|ref|YP_003424883.1|	-	0.0023	17.9	4.0	0.052	13.5	1.3	3.0	3	1	0	3	3	3	1	zinc-ribbons
DnaJ_CXXCXGXG	PF00684.19	gi|288561397|ref|YP_003424883.1|	-	0.011	16.1	2.3	0.1	13.0	0.1	2.6	3	0	0	3	3	3	0	DnaJ	central	domain
DiS_P_DiS	PF06750.13	gi|288561397|ref|YP_003424883.1|	-	0.033	14.3	4.1	4.8	7.4	1.9	3.4	3	1	0	3	3	3	0	Bacterial	Peptidase	A24	N-terminal	domain
Sgf11	PF08209.11	gi|288561397|ref|YP_003424883.1|	-	0.046	13.3	12.2	2.8	7.6	0.2	4.1	4	0	0	4	4	4	0	Sgf11	(transcriptional	regulation	protein)
E7	PF00527.18	gi|288561397|ref|YP_003424883.1|	-	0.056	13.6	3.9	0.4	10.9	0.1	2.4	1	1	0	2	2	2	0	E7	protein,	Early	protein
HypA	PF01155.19	gi|288561397|ref|YP_003424883.1|	-	0.076	13.0	6.1	1.4	8.9	2.8	2.7	1	1	1	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
CpXC	PF14353.6	gi|288561397|ref|YP_003424883.1|	-	0.078	13.0	8.9	3.2	7.8	0.2	4.1	2	2	1	3	3	3	0	CpXC	protein
zf-LITAF-like	PF10601.9	gi|288561397|ref|YP_003424883.1|	-	0.094	13.0	9.3	3.4	8.0	0.1	3.4	4	0	0	4	4	3	0	LITAF-like	zinc	ribbon	domain
zf-ribbon_3	PF13248.6	gi|288561397|ref|YP_003424883.1|	-	0.12	11.8	17.1	0.068	12.6	7.0	3.7	3	1	0	3	3	3	0	zinc-ribbon	domain
zf-C3HC4_3	PF13920.6	gi|288561397|ref|YP_003424883.1|	-	0.13	12.1	8.2	0.15	11.9	1.7	3.1	3	1	1	4	4	4	0	Zinc	finger,	C3HC4	type	(RING	finger)
OrfB_Zn_ribbon	PF07282.11	gi|288561397|ref|YP_003424883.1|	-	0.17	11.9	6.2	0.9	9.5	0.4	3.1	3	0	0	3	3	3	0	Putative	transposase	DNA-binding	domain
Zn_Tnp_IS1595	PF12760.7	gi|288561397|ref|YP_003424883.1|	-	0.17	11.9	9.7	13	5.8	0.1	4.1	3	1	1	4	4	4	0	Transposase	zinc-ribbon	domain
UPF0547	PF10571.9	gi|288561397|ref|YP_003424883.1|	-	0.23	11.6	15.3	1.4	9.0	0.3	3.6	3	1	1	4	4	4	0	Uncharacterised	protein	family	UPF0547
TFIIS_C	PF01096.18	gi|288561397|ref|YP_003424883.1|	-	0.23	11.3	13.5	0.64	9.9	0.3	4.2	4	0	0	4	4	4	0	Transcription	factor	S-II	(TFIIS)
DNA_ligase_ZBD	PF03119.16	gi|288561397|ref|YP_003424883.1|	-	0.34	11.0	6.4	14	5.8	0.3	3.2	3	0	0	3	3	3	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Zn_ribbon_SprT	PF17283.2	gi|288561397|ref|YP_003424883.1|	-	0.42	10.5	5.7	2.5	8.1	2.0	3.0	2	1	0	2	2	2	0	SprT-like	zinc	ribbon	domain
zf-FPG_IleRS	PF06827.14	gi|288561397|ref|YP_003424883.1|	-	0.44	10.5	4.1	3.3	7.6	0.1	3.1	3	0	0	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
zinc_ribbon_4	PF13717.6	gi|288561397|ref|YP_003424883.1|	-	0.47	10.4	7.8	47	4.0	0.0	4.2	4	0	0	4	4	4	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.6	gi|288561397|ref|YP_003424883.1|	-	0.8	9.5	16.5	2.1	8.2	0.7	4.3	4	0	0	4	4	4	0	zinc-ribbon	domain
Lar_restr_allev	PF14354.6	gi|288561397|ref|YP_003424883.1|	-	0.86	10.0	6.9	26	5.3	0.2	3.8	3	1	1	4	4	4	0	Restriction	alleviation	protein	Lar
DUF1272	PF06906.11	gi|288561397|ref|YP_003424883.1|	-	0.88	9.7	11.0	1.1	9.5	3.5	3.4	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF1272)
zf_UBZ	PF18439.1	gi|288561397|ref|YP_003424883.1|	-	0.97	9.1	13.8	13	5.5	0.2	4.2	4	0	0	4	4	4	0	Ubiquitin-Binding	Zinc	Finger
Zn_Tnp_IS91	PF14319.6	gi|288561397|ref|YP_003424883.1|	-	2.2	8.4	5.8	3.6	7.7	1.2	2.9	3	0	0	3	3	3	0	Transposase	zinc-binding	domain
C1_1	PF00130.22	gi|288561397|ref|YP_003424883.1|	-	3.1	7.7	7.7	33	4.5	0.1	3.2	3	1	0	3	3	3	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
TF_Zn_Ribbon	PF08271.12	gi|288561397|ref|YP_003424883.1|	-	5.2	6.7	14.1	8.3	6.0	0.3	4.2	3	1	1	4	4	4	0	TFIIB	zinc-binding
DNA_RNApol_7kD	PF03604.13	gi|288561397|ref|YP_003424883.1|	-	5.9	6.7	9.5	19	5.0	0.0	3.5	3	1	0	3	3	3	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
YhfH	PF14149.6	gi|288561397|ref|YP_003424883.1|	-	9.7	6.3	9.9	6.3	6.9	0.3	3.8	4	0	0	4	4	4	0	YhfH-like	protein
MTD	PF01993.18	gi|288561398|ref|YP_003424884.1|	-	7.6e-137	455.1	0.6	8.7e-137	454.9	0.6	1.0	1	0	0	1	1	1	1	methylene-5,6,7,8-tetrahydromethanopterin	dehydrogenase
Cpta_toxin	PF07254.12	gi|288561399|ref|YP_003424885.1|	-	1.3	9.0	8.2	0.16	11.9	2.4	2.2	1	1	1	2	2	2	0	Membrane-bound	toxin	component	of	toxin-antitoxin	system
DUF3810	PF12725.7	gi|288561399|ref|YP_003424885.1|	-	4.4	6.5	5.5	9.3	5.5	5.5	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3810)
Scm3	PF10384.9	gi|288561400|ref|YP_003424886.1|	-	0.083	12.6	0.2	0.19	11.5	0.1	1.7	1	1	1	2	2	2	0	Centromere	protein	Scm3
Epimerase_2	PF02350.19	gi|288561401|ref|YP_003424887.1|	-	5.5e-05	22.2	0.0	0.00014	20.9	0.0	1.6	1	1	0	1	1	1	1	UDP-N-acetylglucosamine	2-epimerase
O_anti_polymase	PF01901.16	gi|288561402|ref|YP_003424888.1|	-	5.5e-115	384.2	37.9	6.4e-115	384.0	37.9	1.0	1	0	0	1	1	1	1	Putative	O-antigen	polymerase
DUF11	PF01345.18	gi|288561403|ref|YP_003424889.1|	-	1.3e-176	573.5	108.6	4.9e-09	36.4	0.1	28.6	28	0	0	28	28	27	26	Domain	of	unknown	function	DUF11
NPCBM_assoc	PF10633.9	gi|288561403|ref|YP_003424889.1|	-	4.8e-19	68.4	32.0	5.1	7.4	0.0	21.0	24	0	0	24	24	24	4	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
Beta_helix	PF13229.6	gi|288561403|ref|YP_003424889.1|	-	4.7e-17	62.3	166.5	9.7e-09	35.3	18.4	21.2	13	3	10	24	24	13	7	Right	handed	beta	helix	region
TMEM131_like	PF12371.8	gi|288561403|ref|YP_003424889.1|	-	1.4e-13	50.9	3.7	4.2	7.7	0.0	13.1	14	0	0	14	14	14	1	Transmembrane	protein	131-like
DUF2393	PF09624.10	gi|288561403|ref|YP_003424889.1|	-	3.7e-09	36.7	71.7	0.58	10.2	0.4	19.9	22	1	0	22	22	22	5	Protein	of	unknown	function	(DUF2393)
TRAP_beta	PF05753.14	gi|288561403|ref|YP_003424889.1|	-	8.4e-06	25.3	120.8	0.0076	15.7	1.3	19.6	11	2	10	21	21	21	9	Translocon-associated	protein	beta	(TRAPB)
DUF3601	PF12208.8	gi|288561403|ref|YP_003424889.1|	-	1.9e-05	24.6	19.0	4.6	7.4	0.0	10.9	12	0	0	12	12	12	1	Domain	of	unknown	function	(DUF3601)
Transglut_C	PF00927.22	gi|288561403|ref|YP_003424889.1|	-	0.019	15.1	0.6	92	3.2	0.0	6.3	5	0	0	5	5	5	0	Transglutaminase	family,	C-terminal	ig	like	domain
CusF_Ec	PF11604.8	gi|288561403|ref|YP_003424889.1|	-	0.028	14.4	0.4	1.1e+02	2.8	0.0	5.2	5	0	0	5	5	5	0	Copper	binding	periplasmic	protein	CusF
DUF5604	PF18300.1	gi|288561403|ref|YP_003424889.1|	-	0.064	13.2	1.3	60	3.7	0.0	5.1	5	0	0	5	5	5	0	Domain	of	unknown	function	(DUF5604)
YbaB_DNA_bd	PF02575.16	gi|288561403|ref|YP_003424889.1|	-	0.4	10.9	5.8	33	4.8	0.0	5.2	5	0	0	5	5	5	0	YbaB/EbfC	DNA-binding	family
DDE_Tnp_1_6	PF13751.6	gi|288561404|ref|YP_003424890.1|	-	5.8e-19	68.5	0.9	2.7e-18	66.4	0.4	2.1	2	0	0	2	2	2	1	Transposase	DDE	domain
DDE_Tnp_1	PF01609.21	gi|288561404|ref|YP_003424890.1|	-	9.3e-12	45.0	0.6	5.3e-11	42.6	0.6	2.0	1	1	0	1	1	1	1	Transposase	DDE	domain
DUF772	PF05598.11	gi|288561404|ref|YP_003424890.1|	-	4.1e-06	26.7	0.0	1.1e-05	25.3	0.0	1.8	1	0	0	1	1	1	1	Transposase	domain	(DUF772)
DDE_Tnp_1_2	PF13586.6	gi|288561404|ref|YP_003424890.1|	-	0.14	12.5	0.0	1.1	9.6	0.0	2.2	2	0	0	2	2	2	0	Transposase	DDE	domain
DUF4407	PF14362.6	gi|288561405|ref|YP_003424891.1|	-	0.034	13.5	10.0	0.045	13.1	10.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
YkyA	PF10368.9	gi|288561405|ref|YP_003424891.1|	-	0.094	12.4	27.2	0.16	11.7	26.2	1.7	1	1	0	1	1	1	0	Putative	cell-wall	binding	lipoprotein
V_ATPase_I	PF01496.19	gi|288561405|ref|YP_003424891.1|	-	0.11	10.3	11.6	0.14	10.1	11.6	1.0	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
GLE1	PF07817.13	gi|288561405|ref|YP_003424891.1|	-	0.19	10.9	5.3	0.32	10.2	5.3	1.4	1	0	0	1	1	1	0	GLE1-like	protein
ALMT	PF11744.8	gi|288561405|ref|YP_003424891.1|	-	0.33	9.7	11.2	0.41	9.4	11.2	1.1	1	0	0	1	1	1	0	Aluminium	activated	malate	transporter
Spc7	PF08317.11	gi|288561405|ref|YP_003424891.1|	-	0.43	9.4	26.9	0.21	10.5	7.3	2.1	1	1	1	2	2	2	0	Spc7	kinetochore	protein
ApoLp-III	PF07464.11	gi|288561405|ref|YP_003424891.1|	-	1.1	9.4	18.3	4	7.5	18.3	1.7	1	1	0	1	1	1	0	Apolipophorin-III	precursor	(apoLp-III)
DUF148	PF02520.17	gi|288561405|ref|YP_003424891.1|	-	1.3	9.1	17.5	0.052	13.7	8.8	2.6	1	1	0	2	2	2	0	Domain	of	unknown	function	DUF148
LMBR1	PF04791.16	gi|288561405|ref|YP_003424891.1|	-	2.9	6.7	13.8	3.5	6.4	13.8	1.1	1	0	0	1	1	1	0	LMBR1-like	membrane	protein
Exonuc_VII_L	PF02601.15	gi|288561405|ref|YP_003424891.1|	-	3.5	7.1	10.1	4.5	6.7	10.1	1.2	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
Goodbye	PF17109.5	gi|288561405|ref|YP_003424891.1|	-	5	7.6	7.0	0.52	10.8	0.7	2.4	1	1	1	2	2	2	0	fungal	STAND	N-terminal	Goodbye	domain
GATase_3	PF07685.14	gi|288561407|ref|YP_003424893.1|	-	1.8e-33	115.8	0.0	2.9e-33	115.1	0.0	1.3	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
CbiA	PF01656.23	gi|288561407|ref|YP_003424893.1|	-	9e-19	67.8	0.2	2e-18	66.6	0.2	1.6	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_26	PF13500.6	gi|288561407|ref|YP_003424893.1|	-	1.1e-14	54.8	3.2	1.4e-09	38.1	0.1	3.1	4	0	0	4	4	4	2	AAA	domain
SNO	PF01174.19	gi|288561407|ref|YP_003424893.1|	-	1e-06	28.7	0.0	2.3e-06	27.6	0.0	1.5	1	0	0	1	1	1	1	SNO	glutamine	amidotransferase	family
HHH_3	PF12836.7	gi|288561408|ref|YP_003424894.1|	-	1.9e-10	40.8	0.1	5.6e-10	39.3	0.0	1.8	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
Radical_SAM	PF04055.21	gi|288561408|ref|YP_003424894.1|	-	9.1e-10	39.2	0.0	1.4e-09	38.5	0.0	1.3	1	0	0	1	1	1	1	Radical	SAM	superfamily
HHH	PF00633.23	gi|288561408|ref|YP_003424894.1|	-	5.4e-05	22.9	0.1	0.0003	20.5	0.0	2.3	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
Fer4_12	PF13353.6	gi|288561408|ref|YP_003424894.1|	-	0.0003	21.1	0.3	0.00061	20.1	0.3	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
HHH_5	PF14520.6	gi|288561408|ref|YP_003424894.1|	-	0.0016	19.0	0.5	0.0068	17.0	0.1	2.2	2	1	0	2	2	2	1	Helix-hairpin-helix	domain
HHH_6	PF14579.6	gi|288561408|ref|YP_003424894.1|	-	0.0078	16.4	0.0	0.14	12.4	0.0	2.6	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
Fer4_14	PF13394.6	gi|288561408|ref|YP_003424894.1|	-	0.05	13.7	0.1	0.13	12.4	0.1	1.7	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
HHH_2	PF12826.7	gi|288561408|ref|YP_003424894.1|	-	0.066	13.3	0.0	0.23	11.6	0.0	2.0	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
HHH_8	PF14716.6	gi|288561408|ref|YP_003424894.1|	-	0.072	13.5	0.0	0.2	12.0	0.0	1.8	1	0	0	1	1	1	0	Helix-hairpin-helix	domain
DUF655	PF04919.12	gi|288561408|ref|YP_003424894.1|	-	0.078	12.9	0.0	0.18	11.8	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF655)
Soyouz_module	PF14313.6	gi|288561409|ref|YP_003424895.1|	-	0.012	15.3	0.5	0.019	14.7	0.1	1.5	2	0	0	2	2	2	0	N-terminal	region	of	Paramyxovirinae	phosphoprotein	(P)
Mal_decarbox_Al	PF16957.5	gi|288561410|ref|YP_003424896.1|	-	0.049	11.9	0.0	0.067	11.5	0.0	1.1	1	0	0	1	1	1	0	Malonate	decarboxylase,	alpha	subunit,	transporter
HMGL-like	PF00682.19	gi|288561411|ref|YP_003424897.1|	-	1.3e-81	274.1	0.0	3e-81	272.9	0.0	1.6	2	0	0	2	2	2	1	HMGL-like
LeuA_dimer	PF08502.10	gi|288561411|ref|YP_003424897.1|	-	3.5e-33	114.3	0.9	8.6e-33	113.1	0.9	1.7	1	0	0	1	1	1	1	LeuA	allosteric	(dimerisation)	domain
DUF63	PF01889.17	gi|288561412|ref|YP_003424898.1|	-	2.5e-62	211.6	33.5	3e-62	211.3	33.5	1.0	1	0	0	1	1	1	1	Membrane	protein	of	unknown	function	DUF63
PHP_C	PF13263.6	gi|288561413|ref|YP_003424899.1|	-	3.3e-16	58.8	0.0	5.4e-16	58.1	0.0	1.3	1	0	0	1	1	1	1	PHP-associated
PHP	PF02811.19	gi|288561413|ref|YP_003424899.1|	-	0.00014	22.2	0.0	0.00014	22.2	0.0	1.4	1	1	0	1	1	1	1	PHP	domain
DUF1786	PF08735.10	gi|288561414|ref|YP_003424900.1|	-	2.9e-88	295.4	0.0	3.4e-88	295.2	0.0	1.1	1	0	0	1	1	1	1	Putative	pyruvate	format-lyase	activating	enzyme	(DUF1786)
MreB_Mbl	PF06723.13	gi|288561414|ref|YP_003424900.1|	-	0.12	11.1	0.2	3.3	6.4	0.0	2.4	2	1	1	3	3	3	0	MreB/Mbl	protein
FtsA	PF14450.6	gi|288561414|ref|YP_003424900.1|	-	0.15	12.5	0.9	7	7.1	0.1	2.6	2	1	0	2	2	2	0	Cell	division	protein	FtsA
PALP	PF00291.25	gi|288561415|ref|YP_003424901.1|	-	1.4e-42	146.1	0.0	1.7e-42	145.8	0.0	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
DUF4127	PF13552.6	gi|288561415|ref|YP_003424901.1|	-	0.043	12.4	0.0	0.06	12.0	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4127)
AAA_31	PF13614.6	gi|288561416|ref|YP_003424902.1|	-	3.8e-64	215.9	1.6	5.7e-64	215.3	1.6	1.2	1	0	0	1	1	1	1	AAA	domain
CbiA	PF01656.23	gi|288561416|ref|YP_003424902.1|	-	3.1e-24	85.5	0.1	3.9e-24	85.1	0.1	1.1	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
MipZ	PF09140.11	gi|288561416|ref|YP_003424902.1|	-	1.5e-13	50.6	0.3	2e-12	47.0	0.3	2.0	1	1	0	1	1	1	1	ATPase	MipZ
CBP_BcsQ	PF06564.12	gi|288561416|ref|YP_003424902.1|	-	1.6e-12	47.4	0.0	3.5e-12	46.3	0.0	1.6	1	1	0	1	1	1	1	Cellulose	biosynthesis	protein	BcsQ
ParA	PF10609.9	gi|288561416|ref|YP_003424902.1|	-	3.2e-12	46.4	0.4	1.1e-11	44.7	0.4	1.9	1	1	0	1	1	1	1	NUBPL	iron-transfer	P-loop	NTPase
Fer4_NifH	PF00142.18	gi|288561416|ref|YP_003424902.1|	-	2e-09	37.3	0.4	2.5e-08	33.7	0.4	2.0	2	0	0	2	2	2	1	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
ArsA_ATPase	PF02374.15	gi|288561416|ref|YP_003424902.1|	-	3e-07	29.9	1.9	9.1e-07	28.4	1.9	1.8	1	1	0	1	1	1	1	Anion-transporting	ATPase
SRP54	PF00448.22	gi|288561416|ref|YP_003424902.1|	-	0.0012	18.5	0.7	0.021	14.5	0.4	2.3	2	1	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
VirC1	PF07015.11	gi|288561416|ref|YP_003424902.1|	-	0.003	16.9	0.2	0.0052	16.1	0.2	1.4	1	0	0	1	1	1	1	VirC1	protein
DUF853	PF05872.12	gi|288561416|ref|YP_003424902.1|	-	0.01	14.5	0.3	0.014	14.0	0.3	1.1	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF853)
ATP_bind_1	PF03029.17	gi|288561416|ref|YP_003424902.1|	-	0.014	15.2	0.4	0.021	14.6	0.4	1.4	1	1	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
CLP1_P	PF16575.5	gi|288561416|ref|YP_003424902.1|	-	0.019	14.7	0.1	0.037	13.8	0.1	1.5	1	0	0	1	1	1	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
MeaB	PF03308.16	gi|288561416|ref|YP_003424902.1|	-	0.025	13.6	0.1	0.038	13.0	0.1	1.2	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
Rap1a	PF18602.1	gi|288561417|ref|YP_003424903.1|	-	0.028	14.7	0.1	0.12	12.7	0.1	2.1	1	1	0	1	1	1	0	Rap1a	immunity	proteins
CDC45	PF02724.14	gi|288561417|ref|YP_003424903.1|	-	0.057	11.7	22.5	0.068	11.5	22.5	1.0	1	0	0	1	1	1	0	CDC45-like	protein
Peptidase_S64	PF08192.11	gi|288561417|ref|YP_003424903.1|	-	0.59	8.5	18.9	0.7	8.3	18.9	1.0	1	0	0	1	1	1	0	Peptidase	family	S64
AP_endonuc_2	PF01261.24	gi|288561418|ref|YP_003424904.1|	-	9e-22	77.5	0.1	1.2e-21	77.2	0.1	1.1	1	0	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
PdxJ	PF03740.13	gi|288561418|ref|YP_003424904.1|	-	0.016	14.3	0.1	1.3	8.1	0.1	2.2	1	1	1	2	2	2	0	Pyridoxal	phosphate	biosynthesis	protein	PdxJ
BLI1	PF17324.2	gi|288561418|ref|YP_003424904.1|	-	0.018	15.7	0.0	0.071	13.8	0.0	1.9	2	0	0	2	2	2	0	BLOC-1	interactor	1
Hydrolase	PF00702.26	gi|288561419|ref|YP_003424905.1|	-	5.6e-20	72.5	0.2	1.6e-19	71.0	0.2	1.7	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.12	gi|288561419|ref|YP_003424905.1|	-	4.3e-05	23.4	0.9	0.091	12.5	0.1	2.9	2	1	0	2	2	2	2	haloacid	dehalogenase-like	hydrolase
HAD_2	PF13419.6	gi|288561419|ref|YP_003424905.1|	-	0.00025	21.2	0.3	0.00076	19.6	0.3	2.1	1	1	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Acid_phosphat_B	PF03767.14	gi|288561419|ref|YP_003424905.1|	-	0.02	14.5	1.6	0.13	11.8	0.2	2.7	2	1	0	2	2	2	0	HAD	superfamily,	subfamily	IIIB	(Acid	phosphatase)
Oxidored_FMN	PF00724.20	gi|288561420|ref|YP_003424906.1|	-	1.2e-68	231.9	0.0	1.9e-47	162.2	0.0	2.0	1	1	1	2	2	2	2	NADH:flavin	oxidoreductase	/	NADH	oxidase	family
Dus	PF01207.17	gi|288561420|ref|YP_003424906.1|	-	2.8e-06	26.6	0.0	8e-06	25.2	0.0	1.6	2	0	0	2	2	2	1	Dihydrouridine	synthase	(Dus)
His_biosynth	PF00977.21	gi|288561420|ref|YP_003424906.1|	-	0.00048	19.7	0.0	0.0017	17.9	0.0	1.6	1	1	0	1	1	1	1	Histidine	biosynthesis	protein
DHO_dh	PF01180.21	gi|288561420|ref|YP_003424906.1|	-	0.087	12.0	0.1	0.23	10.6	0.0	1.6	2	0	0	2	2	2	0	Dihydroorotate	dehydrogenase
MR_MLE_C	PF13378.6	gi|288561420|ref|YP_003424906.1|	-	0.15	11.6	0.0	21	4.6	0.0	2.3	2	0	0	2	2	2	0	Enolase	C-terminal	domain-like
PrlF_antitoxin	PF15937.5	gi|288561421|ref|YP_003424907.1|	-	3.7e-05	24.1	0.2	4.2e-05	23.9	0.2	1.2	1	0	0	1	1	1	1	prlF	antitoxin	for	toxin	YhaV_toxin
MazE_antitoxin	PF04014.18	gi|288561421|ref|YP_003424907.1|	-	3.7e-05	23.5	0.1	5.2e-05	23.1	0.1	1.2	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE,	bacterial	antitoxin
TPR_2	PF07719.17	gi|288561422|ref|YP_003424908.1|	-	2.4e-13	49.1	11.4	0.015	15.3	0.0	7.2	6	1	1	7	7	7	4	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|288561422|ref|YP_003424908.1|	-	1.4e-10	40.5	20.2	0.0041	17.2	0.1	6.7	5	1	1	6	6	6	3	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|288561422|ref|YP_003424908.1|	-	2.9e-08	33.2	16.9	0.0062	16.3	0.1	7.0	7	1	1	8	8	7	3	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|288561422|ref|YP_003424908.1|	-	4.2e-07	30.4	2.1	0.023	15.2	0.1	5.3	5	1	0	6	6	4	1	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|288561422|ref|YP_003424908.1|	-	4.6e-07	30.0	3.2	1.2	9.4	0.0	4.9	4	2	1	5	5	5	3	Tetratricopeptide	repeat
TPR_9	PF13371.6	gi|288561422|ref|YP_003424908.1|	-	2.8e-06	27.4	0.0	0.0032	17.6	0.0	2.9	3	0	0	3	3	3	1	Tetratricopeptide	repeat
SRP_TPR_like	PF17004.5	gi|288561422|ref|YP_003424908.1|	-	7.7e-06	25.9	16.3	0.0015	18.5	2.9	3.8	2	2	2	4	4	4	2	Putative	TPR-like	repeat
Fis1_TPR_C	PF14853.6	gi|288561422|ref|YP_003424908.1|	-	1.5e-05	25.0	11.9	0.71	10.0	0.0	5.4	6	0	0	6	6	6	2	Fis1	C-terminal	tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|288561422|ref|YP_003424908.1|	-	8.8e-05	22.7	15.0	0.95	9.7	0.4	4.7	4	2	2	6	6	6	4	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_16	PF13432.6	gi|288561422|ref|YP_003424908.1|	-	0.00016	22.2	0.0	0.4	11.4	0.0	3.8	4	1	0	4	4	4	1	Tetratricopeptide	repeat
Alkyl_sulf_dimr	PF14863.6	gi|288561422|ref|YP_003424908.1|	-	0.00053	20.5	0.4	4.5	7.7	0.0	3.9	3	1	0	4	4	4	1	Alkyl	sulfatase	dimerisation
TPR_17	PF13431.6	gi|288561422|ref|YP_003424908.1|	-	0.013	15.8	8.1	0.2	12.1	0.0	4.5	6	0	0	6	6	4	0	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|288561422|ref|YP_003424908.1|	-	0.014	16.2	0.0	37	5.5	0.0	4.5	3	2	2	5	5	5	0	Tetratricopeptide	repeat
DUF627	PF04781.12	gi|288561422|ref|YP_003424908.1|	-	0.015	15.3	3.5	1.3	9.1	0.1	3.8	5	0	0	5	5	5	0	Protein	of	unknown	function	(DUF627)
TPR_MalT	PF17874.1	gi|288561422|ref|YP_003424908.1|	-	0.022	14.1	0.0	1.9	7.8	0.0	3.1	4	0	0	4	4	4	0	MalT-like	TPR	region
TPR_10	PF13374.6	gi|288561422|ref|YP_003424908.1|	-	0.034	14.0	3.0	15	5.6	0.0	4.4	5	0	0	5	5	4	0	Tetratricopeptide	repeat
DUF4894	PF16235.5	gi|288561422|ref|YP_003424908.1|	-	0.14	12.6	3.2	0.2	12.0	1.1	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4894)
TPR_11	PF13414.6	gi|288561422|ref|YP_003424908.1|	-	0.2	11.4	8.1	7.5	6.3	0.1	4.7	4	1	1	5	5	5	0	TPR	repeat
MIT	PF04212.18	gi|288561422|ref|YP_003424908.1|	-	0.32	11.1	3.6	34	4.6	0.1	4.0	3	1	0	3	3	3	0	MIT	(microtubule	interacting	and	transport)	domain
TPR_2	PF07719.17	gi|288561423|ref|YP_003424909.1|	-	6.7e-21	72.7	25.2	0.0029	17.6	0.0	9.3	9	1	0	9	9	9	6	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|288561423|ref|YP_003424909.1|	-	8.7e-15	55.0	9.3	0.00012	22.5	0.0	6.0	4	1	1	6	6	6	3	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|288561423|ref|YP_003424909.1|	-	7.1e-13	47.7	35.1	0.004	17.3	0.2	8.4	8	2	1	9	9	9	5	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|288561423|ref|YP_003424909.1|	-	5.2e-12	45.8	23.4	6.1e-06	26.4	1.1	4.6	2	1	3	5	5	5	4	Anaphase-promoting	complex,	cyclosome,	subunit	3
SRP_TPR_like	PF17004.5	gi|288561423|ref|YP_003424909.1|	-	6.5e-12	45.5	18.1	2.3e-05	24.4	1.7	3.6	2	1	1	3	3	3	3	Putative	TPR-like	repeat
Fis1_TPR_C	PF14853.6	gi|288561423|ref|YP_003424909.1|	-	4.3e-11	42.7	29.1	0.00018	21.5	0.0	8.1	7	2	2	9	9	8	5	Fis1	C-terminal	tetratricopeptide	repeat
TPR_1	PF00515.28	gi|288561423|ref|YP_003424909.1|	-	7.1e-11	41.4	31.7	0.054	13.3	0.2	9.1	10	0	0	10	10	10	5	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|288561423|ref|YP_003424909.1|	-	9.8e-11	41.8	7.6	0.028	14.7	0.4	6.8	5	3	2	7	7	6	4	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|288561423|ref|YP_003424909.1|	-	1.1e-10	42.0	0.0	0.81	10.4	0.0	6.4	6	1	0	6	6	6	2	Tetratricopeptide	repeat
TPR_9	PF13371.6	gi|288561423|ref|YP_003424909.1|	-	2.3e-10	40.5	0.0	0.00032	20.8	0.0	3.7	2	2	1	3	3	3	2	Tetratricopeptide	repeat
TPR_7	PF13176.6	gi|288561423|ref|YP_003424909.1|	-	8.4e-09	34.9	4.7	0.14	12.3	0.0	5.9	5	1	0	5	5	5	2	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|288561423|ref|YP_003424909.1|	-	4.8e-07	30.0	0.0	8.9	7.4	0.0	6.7	5	2	4	9	9	7	0	Tetratricopeptide	repeat
NARP1	PF12569.8	gi|288561423|ref|YP_003424909.1|	-	9.3e-07	28.1	4.2	0.071	12.0	0.1	4.1	1	1	3	5	5	5	3	NMDA	receptor-regulated	protein	1
TPR_6	PF13174.6	gi|288561423|ref|YP_003424909.1|	-	1.9e-06	28.1	2.1	6.2	7.7	0.0	6.4	7	0	0	7	7	7	1	Tetratricopeptide	repeat
TPR_11	PF13414.6	gi|288561423|ref|YP_003424909.1|	-	9.4e-06	25.2	14.5	0.067	12.9	0.0	7.1	6	1	1	7	7	7	1	TPR	repeat
TPR_10	PF13374.6	gi|288561423|ref|YP_003424909.1|	-	1e-05	25.2	0.2	6.2	6.8	0.1	6.3	6	1	0	6	6	6	1	Tetratricopeptide	repeat
Type_III_YscG	PF09477.10	gi|288561423|ref|YP_003424909.1|	-	3.4e-05	23.9	0.7	0.012	15.6	0.0	3.1	3	0	0	3	3	3	1	Bacterial	type	II	secretion	system	chaperone	protein	(type_III_yscG)
TPR_15	PF13429.6	gi|288561423|ref|YP_003424909.1|	-	8.9e-05	21.8	0.8	0.42	9.8	0.0	3.4	2	1	1	3	3	3	1	Tetratricopeptide	repeat
TPR_17	PF13431.6	gi|288561423|ref|YP_003424909.1|	-	0.0011	19.2	16.8	5.1	7.7	0.3	6.8	7	0	0	7	7	6	2	Tetratricopeptide	repeat
Alkyl_sulf_dimr	PF14863.6	gi|288561423|ref|YP_003424909.1|	-	0.002	18.6	0.1	11	6.5	0.0	4.1	3	2	2	5	5	5	0	Alkyl	sulfatase	dimerisation
TPR_20	PF14561.6	gi|288561423|ref|YP_003424909.1|	-	0.034	14.5	0.4	22	5.5	0.0	3.8	2	1	1	4	4	4	0	Tetratricopeptide	repeat
TPR_MalT	PF17874.1	gi|288561423|ref|YP_003424909.1|	-	0.044	13.2	0.0	0.48	9.8	0.0	2.6	2	1	1	3	3	3	0	MalT-like	TPR	region
Peptidase_C39	PF03412.15	gi|288561424|ref|YP_003424910.1|	-	1.7e-23	82.9	0.1	4.3e-22	78.4	0.0	2.4	2	0	0	2	2	2	1	Peptidase	C39	family
NosD	PF05048.13	gi|288561424|ref|YP_003424910.1|	-	1.2e-11	44.3	22.9	1.2e-11	44.3	22.9	2.3	2	0	0	2	2	2	1	Periplasmic	copper-binding	protein	(NosD)
Peptidase_C39_2	PF13529.6	gi|288561424|ref|YP_003424910.1|	-	0.016	15.8	0.3	0.016	15.8	0.3	3.5	2	1	0	3	3	3	0	Peptidase_C39	like	family
Amidase	PF01425.21	gi|288561425|ref|YP_003424911.1|	-	1.3e-124	416.6	0.0	1.5e-124	416.4	0.0	1.0	1	0	0	1	1	1	1	Amidase
Hexapep	PF00132.24	gi|288561426|ref|YP_003424912.1|	-	1.1e-14	53.4	17.7	4e-10	39.0	8.7	3.5	3	1	0	3	3	3	3	Bacterial	transferase	hexapeptide	(six	repeats)
Hexapep_2	PF14602.6	gi|288561426|ref|YP_003424912.1|	-	5.9e-12	45.1	13.9	3.4e-09	36.3	6.7	3.6	3	1	0	3	3	3	2	Hexapeptide	repeat	of	succinyl-transferase
Mac	PF12464.8	gi|288561426|ref|YP_003424912.1|	-	8.1e-09	35.6	0.0	1.3e-08	34.9	0.0	1.3	1	0	0	1	1	1	1	Maltose	acetyltransferase
KASH_CCD	PF14662.6	gi|288561427|ref|YP_003424913.1|	-	0.023	14.5	43.4	0.083	12.7	9.2	2.5	1	1	1	2	2	2	0	Coiled-coil	region	of	CCDC155	or	KASH
bMG6	PF17962.1	gi|288561427|ref|YP_003424913.1|	-	0.17	12.1	1.7	0.34	11.1	0.4	2.2	2	0	0	2	2	2	0	Bacterial	macroglobulin	domain	6
PKcGMP_CC	PF16808.5	gi|288561427|ref|YP_003424913.1|	-	1.2	9.1	31.9	0.07	13.0	7.1	5.4	4	1	1	5	5	5	0	Coiled-coil	N-terminus	of	cGMP-dependent	protein	kinase
TMF_TATA_bd	PF12325.8	gi|288561427|ref|YP_003424913.1|	-	2.7	8.3	36.5	2	8.7	13.4	3.9	1	1	3	4	4	4	0	TATA	element	modulatory	factor	1	TATA	binding
ISG65-75	PF11727.8	gi|288561427|ref|YP_003424913.1|	-	3.2	6.9	27.0	0.028	13.7	9.1	2.9	1	1	2	3	3	3	0	Invariant	surface	glycoprotein
DUF4407	PF14362.6	gi|288561427|ref|YP_003424913.1|	-	6.9	5.9	25.3	97	2.2	25.3	2.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
zinc_ribbon_2	PF13240.6	gi|288561428|ref|YP_003424914.1|	-	2.8e-09	36.4	17.6	4.5e-07	29.4	5.4	3.4	3	0	0	3	3	3	2	zinc-ribbon	domain
DZR	PF12773.7	gi|288561428|ref|YP_003424914.1|	-	3.4e-09	36.6	7.6	1.3e-05	25.1	1.3	2.3	2	0	0	2	2	2	2	Double	zinc	ribbon
zf-ribbon_3	PF13248.6	gi|288561428|ref|YP_003424914.1|	-	9.5e-08	31.2	14.4	2.8e-06	26.5	2.4	3.2	3	0	0	3	3	3	2	zinc-ribbon	domain
PhnA_Zn_Ribbon	PF08274.12	gi|288561428|ref|YP_003424914.1|	-	0.00018	21.4	7.0	0.0011	18.9	1.2	2.7	2	0	0	2	2	2	1	PhnA	Zinc-Ribbon
Zn_Tnp_IS1595	PF12760.7	gi|288561428|ref|YP_003424914.1|	-	0.00051	20.0	0.8	0.00051	20.0	0.8	2.6	2	1	0	2	2	2	1	Transposase	zinc-ribbon	domain
EF-hand_7	PF13499.6	gi|288561428|ref|YP_003424914.1|	-	0.00079	19.8	0.4	0.0015	18.9	0.4	1.5	1	0	0	1	1	1	1	EF-hand	domain	pair
Lar_restr_allev	PF14354.6	gi|288561428|ref|YP_003424914.1|	-	0.0083	16.5	8.8	0.012	16.0	0.6	3.3	2	1	0	2	2	2	1	Restriction	alleviation	protein	Lar
DUF2318	PF10080.9	gi|288561428|ref|YP_003424914.1|	-	0.01	15.9	3.9	0.04	14.0	0.1	2.3	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2318)
RPA_interact_C	PF14768.6	gi|288561428|ref|YP_003424914.1|	-	0.018	15.6	1.2	0.65	10.6	0.1	2.6	2	0	0	2	2	2	0	Replication	protein	A	interacting	C-terminal
TF_Zn_Ribbon	PF08271.12	gi|288561428|ref|YP_003424914.1|	-	0.049	13.2	12.1	0.21	11.1	2.7	2.9	2	1	0	2	2	2	0	TFIIB	zinc-binding
Zn-ribbon_8	PF09723.10	gi|288561428|ref|YP_003424914.1|	-	0.084	13.0	13.6	1.6	9.0	0.1	3.9	3	1	0	3	3	3	0	Zinc	ribbon	domain
A2L_zn_ribbon	PF08792.10	gi|288561428|ref|YP_003424914.1|	-	0.19	11.5	0.2	0.19	11.5	0.2	3.9	3	1	1	4	4	4	0	A2L	zinc	ribbon	domain
PHF5	PF03660.14	gi|288561428|ref|YP_003424914.1|	-	0.34	11.1	4.6	9.4	6.5	0.7	2.7	2	0	0	2	2	2	0	PHF5-like	protein
zinc-ribbon_6	PF10005.9	gi|288561428|ref|YP_003424914.1|	-	0.35	11.6	5.6	2.6	8.8	0.7	2.6	2	0	0	2	2	2	0	zinc-ribbon	domain
zf_UBZ	PF18439.1	gi|288561428|ref|YP_003424914.1|	-	0.4	10.3	0.1	0.4	10.3	0.1	3.5	3	1	1	4	4	4	0	Ubiquitin-Binding	Zinc	Finger
DHHC	PF01529.20	gi|288561428|ref|YP_003424914.1|	-	0.43	10.7	6.5	14	5.8	0.0	3.1	3	0	0	3	3	3	0	DHHC	palmitoyltransferase
HypA	PF01155.19	gi|288561428|ref|YP_003424914.1|	-	0.47	10.5	9.2	1.2	9.2	1.1	2.5	2	1	0	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
CCDC24	PF15669.5	gi|288561428|ref|YP_003424914.1|	-	0.57	10.0	2.1	0.27	11.1	0.2	1.5	2	0	0	2	2	2	0	Coiled-coil	domain-containing	protein	24	family
C1_2	PF03107.16	gi|288561428|ref|YP_003424914.1|	-	0.77	10.1	11.7	0.23	11.8	1.3	2.8	2	1	0	2	2	2	0	C1	domain
Nudix_N_2	PF14803.6	gi|288561428|ref|YP_003424914.1|	-	0.86	9.6	0.1	0.86	9.6	0.1	3.9	4	0	0	4	4	4	0	Nudix	N-terminal
OrfB_Zn_ribbon	PF07282.11	gi|288561428|ref|YP_003424914.1|	-	0.88	9.5	18.4	0.31	11.0	2.8	3.1	2	1	1	3	3	3	0	Putative	transposase	DNA-binding	domain
zf-C2H2	PF00096.26	gi|288561428|ref|YP_003424914.1|	-	1.3	9.7	0.0	1.3	9.7	0.0	4.2	5	0	0	5	5	4	0	Zinc	finger,	C2H2	type
zf-RanBP	PF00641.18	gi|288561428|ref|YP_003424914.1|	-	1.4	8.3	10.4	0.12	11.7	5.0	2.0	2	0	0	2	2	2	0	Zn-finger	in	Ran	binding	protein	and	others
SR-25	PF10500.9	gi|288561428|ref|YP_003424914.1|	-	1.6	8.3	23.9	0.042	13.5	12.5	2.1	2	0	0	2	2	2	0	Nuclear	RNA-splicing-associated	protein
zf-tcix	PF14952.6	gi|288561428|ref|YP_003424914.1|	-	2	8.1	12.5	0.21	11.2	1.5	3.2	3	0	0	3	3	3	0	Putative	treble-clef,	zinc-finger,	Zn-binding
zinc_ribbon_15	PF17032.5	gi|288561428|ref|YP_003424914.1|	-	2.9	8.7	15.7	1.3	9.8	4.2	2.8	2	1	0	2	2	2	0	zinc-ribbon	family
DNA_RNApol_7kD	PF03604.13	gi|288561428|ref|YP_003424914.1|	-	2.9	7.7	12.3	1	9.1	0.9	3.1	2	1	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zinc_ribbon_9	PF14369.6	gi|288561428|ref|YP_003424914.1|	-	3.1	8.1	10.1	3.2	8.1	0.5	3.5	3	1	1	4	4	3	0	zinc-ribbon
TackOD1	PF18551.1	gi|288561428|ref|YP_003424914.1|	-	5.7	6.6	10.3	5.7	6.6	0.9	2.5	2	1	0	2	2	2	0	Thaumarchaeal	output	domain	1
zf-NADH-PPase	PF09297.11	gi|288561428|ref|YP_003424914.1|	-	6	6.6	9.5	23	4.7	2.4	3.7	2	2	1	3	3	3	0	NADH	pyrophosphatase	zinc	ribbon	domain
zinc_ribbon_2	PF13240.6	gi|288561429|ref|YP_003424915.1|	-	1.3e-15	56.6	31.2	1.9e-07	30.6	8.9	4.3	4	0	0	4	4	4	3	zinc-ribbon	domain
DZR	PF12773.7	gi|288561429|ref|YP_003424915.1|	-	1.1e-12	47.7	24.3	9.7e-10	38.3	13.1	2.9	2	1	1	3	3	3	3	Double	zinc	ribbon
zf-ribbon_3	PF13248.6	gi|288561429|ref|YP_003424915.1|	-	1.1e-07	31.0	27.6	0.002	17.5	3.2	4.3	4	0	0	4	4	4	3	zinc-ribbon	domain
EF-hand_5	PF13202.6	gi|288561429|ref|YP_003424915.1|	-	5.2e-06	25.7	0.5	0.0026	17.2	0.3	2.3	2	0	0	2	2	2	1	EF	hand
MAP65_ASE1	PF03999.12	gi|288561429|ref|YP_003424915.1|	-	2.2e-05	23.4	0.0	4.8e-05	22.3	0.0	1.4	1	1	0	1	1	1	1	Microtubule	associated	protein	(MAP65/ASE1	family)
TF_Zn_Ribbon	PF08271.12	gi|288561429|ref|YP_003424915.1|	-	0.00025	20.5	23.2	0.013	15.0	1.0	4.1	3	1	0	3	3	3	2	TFIIB	zinc-binding
EF-hand_7	PF13499.6	gi|288561429|ref|YP_003424915.1|	-	0.00061	20.2	1.1	0.0021	18.5	0.6	2.1	1	1	1	2	2	2	2	EF-hand	domain	pair
EF-hand_8	PF13833.6	gi|288561429|ref|YP_003424915.1|	-	0.00076	19.3	0.8	0.49	10.3	0.1	2.3	1	1	1	2	2	2	2	EF-hand	domain	pair
EF-hand_6	PF13405.6	gi|288561429|ref|YP_003424915.1|	-	0.00077	19.2	3.4	0.11	12.5	0.0	2.7	3	0	0	3	3	2	1	EF-hand	domain
Presenilin	PF01080.17	gi|288561429|ref|YP_003424915.1|	-	0.0013	17.5	5.0	0.0013	17.5	5.0	2.2	2	0	0	2	2	2	1	Presenilin
EF-hand_1	PF00036.32	gi|288561429|ref|YP_003424915.1|	-	0.0028	17.1	5.5	0.65	9.7	0.3	2.8	3	0	0	3	3	3	2	EF	hand
SOG2	PF10428.9	gi|288561429|ref|YP_003424915.1|	-	0.0033	16.7	17.0	0.0033	16.7	17.0	2.2	2	0	0	2	2	2	1	RAM	signalling	pathway	protein
EF-hand_10	PF14788.6	gi|288561429|ref|YP_003424915.1|	-	0.0035	17.2	0.1	0.0074	16.1	0.1	1.6	1	0	0	1	1	1	1	EF	hand
RIFIN	PF02009.16	gi|288561429|ref|YP_003424915.1|	-	0.0037	17.2	3.1	0.0053	16.7	0.3	2.2	2	0	0	2	2	2	1	Rifin
Zn_Tnp_IS1595	PF12760.7	gi|288561429|ref|YP_003424915.1|	-	0.0065	16.4	1.0	0.0065	16.4	1.0	4.0	2	1	1	3	3	2	1	Transposase	zinc-ribbon	domain
zf-tcix	PF14952.6	gi|288561429|ref|YP_003424915.1|	-	0.0067	16.0	5.3	0.0067	16.0	5.3	4.3	4	0	0	4	4	4	1	Putative	treble-clef,	zinc-finger,	Zn-binding
DUF35_N	PF12172.8	gi|288561429|ref|YP_003424915.1|	-	0.0072	16.2	14.0	0.93	9.4	0.4	4.6	4	1	0	4	4	4	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zinc-ribbons_6	PF07191.12	gi|288561429|ref|YP_003424915.1|	-	0.0078	16.2	15.6	1.2	9.2	0.1	3.0	2	1	0	2	2	2	2	zinc-ribbons
TackOD1	PF18551.1	gi|288561429|ref|YP_003424915.1|	-	0.013	15.2	18.3	1.1	8.9	12.5	2.9	2	1	0	2	2	2	0	Thaumarchaeal	output	domain	1
A2L_zn_ribbon	PF08792.10	gi|288561429|ref|YP_003424915.1|	-	0.014	15.1	1.8	0.014	15.1	1.8	5.0	2	1	2	4	4	4	0	A2L	zinc	ribbon	domain
PhnA_Zn_Ribbon	PF08274.12	gi|288561429|ref|YP_003424915.1|	-	0.028	14.3	2.4	0.028	14.3	2.4	4.5	4	1	0	4	4	3	0	PhnA	Zinc-Ribbon
SPARC_Ca_bdg	PF10591.9	gi|288561429|ref|YP_003424915.1|	-	0.03	14.7	1.1	0.051	13.9	0.0	1.9	2	0	0	2	2	1	0	Secreted	protein	acidic	and	rich	in	cysteine	Ca	binding	region
Lar_restr_allev	PF14354.6	gi|288561429|ref|YP_003424915.1|	-	0.13	12.6	0.3	0.13	12.6	0.3	4.7	2	1	1	3	3	3	0	Restriction	alleviation	protein	Lar
zf-RanBP	PF00641.18	gi|288561429|ref|YP_003424915.1|	-	0.14	11.5	13.4	2	7.8	2.1	3.7	2	0	0	2	2	2	0	Zn-finger	in	Ran	binding	protein	and	others
Neur_chan_memb	PF02932.16	gi|288561429|ref|YP_003424915.1|	-	0.16	12.0	3.1	0.12	12.4	0.3	2.0	2	0	0	2	2	2	0	Neurotransmitter-gated	ion-channel	transmembrane	region
EVI2A	PF05399.11	gi|288561429|ref|YP_003424915.1|	-	0.26	10.9	25.5	0.018	14.6	14.9	2.3	2	0	0	2	2	2	0	Ectropic	viral	integration	site	2A	protein	(EVI2A)
Velvet	PF11754.8	gi|288561429|ref|YP_003424915.1|	-	0.49	10.3	17.8	0.91	9.4	9.9	2.3	2	0	0	2	2	2	0	Velvet	factor
DUF1178	PF06676.11	gi|288561429|ref|YP_003424915.1|	-	1	9.7	0.0	1	9.7	0.0	3.6	4	0	0	4	4	3	0	Protein	of	unknown	function	(DUF1178)
Raftlin	PF15250.6	gi|288561429|ref|YP_003424915.1|	-	1.3	7.7	9.5	0.098	11.4	3.4	2.0	2	0	0	2	2	2	0	Raftlin
Zip	PF02535.22	gi|288561429|ref|YP_003424915.1|	-	2.2	7.4	10.5	0.1	11.8	3.2	2.0	2	0	0	2	2	2	0	ZIP	Zinc	transporter
PHF5	PF03660.14	gi|288561429|ref|YP_003424915.1|	-	2.4	8.4	13.2	0.19	11.9	6.4	2.2	2	0	0	2	2	2	0	PHF5-like	protein
HypA	PF01155.19	gi|288561429|ref|YP_003424915.1|	-	3	7.9	18.4	7.7	6.6	0.1	3.3	2	1	1	3	3	3	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
RPA_interact_C	PF14768.6	gi|288561429|ref|YP_003424915.1|	-	4.8	7.8	10.2	6	7.5	0.0	2.7	3	0	0	3	3	2	0	Replication	protein	A	interacting	C-terminal
Zn-ribbon_8	PF09723.10	gi|288561429|ref|YP_003424915.1|	-	5.5	7.2	23.2	30	4.8	0.0	5.5	3	1	1	4	4	4	0	Zinc	ribbon	domain
GREB1	PF15782.5	gi|288561429|ref|YP_003424915.1|	-	6.3	3.8	18.4	0.1	9.7	7.6	2.0	2	0	0	2	2	2	0	Gene	regulated	by	oestrogen	in	breast	cancer
zinc-ribbon_6	PF10005.9	gi|288561429|ref|YP_003424915.1|	-	6.8	7.5	13.5	2.8	8.7	0.5	3.6	3	0	0	3	3	3	0	zinc-ribbon	domain
DNA_ligase_ZBD	PF03119.16	gi|288561429|ref|YP_003424915.1|	-	7.6	6.7	10.4	1.8	8.7	1.8	3.0	2	1	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf_UBZ	PF18439.1	gi|288561429|ref|YP_003424915.1|	-	9.9	5.9	18.9	9.4	5.9	0.1	4.9	5	0	0	5	5	5	0	Ubiquitin-Binding	Zinc	Finger
CTP-dep_RFKase	PF01982.16	gi|288561430|ref|YP_003424916.1|	-	2.3e-35	121.3	0.1	2.7e-35	121.1	0.1	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF120
Glycos_transf_2	PF00535.26	gi|288561431|ref|YP_003424917.1|	-	7e-26	91.1	0.0	1.2e-25	90.3	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|288561431|ref|YP_003424917.1|	-	3.1e-10	40.3	0.0	5.5e-10	39.5	0.0	1.4	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.9	gi|288561431|ref|YP_003424917.1|	-	2.3e-07	30.5	0.1	4.2e-07	29.7	0.1	1.4	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|288561431|ref|YP_003424917.1|	-	0.00092	19.7	0.0	0.0019	18.7	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
UPF0182	PF03699.13	gi|288561431|ref|YP_003424917.1|	-	0.096	10.8	2.7	0.15	10.2	2.7	1.2	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0182)
Xan_ur_permease	PF00860.20	gi|288561433|ref|YP_003424919.1|	-	1.6e-27	96.3	36.7	2e-27	95.9	36.7	1.0	1	0	0	1	1	1	1	Permease	family
Asp4	PF16996.5	gi|288561433|ref|YP_003424919.1|	-	0.058	13.2	1.5	0.21	11.4	1.5	2.0	1	0	0	1	1	1	0	Accessory	secretory	protein	Sec	Asp4
DUF5464	PF17552.2	gi|288561433|ref|YP_003424919.1|	-	0.15	12.4	0.1	0.15	12.4	0.1	3.0	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5464)
DUF11	PF01345.18	gi|288561434|ref|YP_003424920.1|	-	9.2e-128	416.9	139.7	3.9e-15	55.9	2.2	17.0	16	0	0	16	16	16	16	Domain	of	unknown	function	DUF11
TIG_2	PF18020.1	gi|288561434|ref|YP_003424920.1|	-	0.0023	18.5	7.4	6.6	7.4	0.0	5.4	5	0	0	5	5	5	2	TIG	domain	found	in	plexin
GH97_C	PF14509.6	gi|288561434|ref|YP_003424920.1|	-	0.0052	17.0	18.8	1.4	9.2	0.1	6.7	8	0	0	8	8	8	3	Glycosyl-hydrolase	97	C-terminal,	oligomerisation
HdeA	PF06411.11	gi|288561434|ref|YP_003424920.1|	-	0.01	16.0	2.3	15	5.8	0.2	4.3	3	0	0	3	3	3	0	HdeA/HdeB	family
ETC_C1_NDUFA5	PF04716.14	gi|288561434|ref|YP_003424920.1|	-	0.43	10.4	2.7	45	3.9	0.0	3.8	5	0	0	5	5	5	0	ETC	complex	I	subunit	conserved	region
CzcE	PF16986.5	gi|288561434|ref|YP_003424920.1|	-	0.56	10.6	15.9	0.51	10.7	0.3	7.0	7	0	0	7	7	7	0	Heavy-metal	resistance	protein	CzcE
Tex_N	PF09371.10	gi|288561435|ref|YP_003424921.1|	-	2.8e-69	232.4	6.4	2.8e-69	232.4	6.4	1.7	2	0	0	2	2	2	1	Tex-like	protein	N-terminal	domain
Tex_YqgF	PF16921.5	gi|288561435|ref|YP_003424921.1|	-	2e-55	186.6	0.1	5.1e-55	185.3	0.1	1.7	1	0	0	1	1	1	1	Tex	protein	YqgF-like	domain
HHH_3	PF12836.7	gi|288561435|ref|YP_003424921.1|	-	6.5e-28	96.8	0.2	2.7e-27	94.8	0.0	2.2	2	0	0	2	2	1	1	Helix-hairpin-helix	motif
HHH_9	PF17674.1	gi|288561435|ref|YP_003424921.1|	-	5e-20	72.2	0.1	1.2e-18	67.8	0.0	3.3	2	0	0	2	2	2	1	HHH	domain
S1	PF00575.23	gi|288561435|ref|YP_003424921.1|	-	6.5e-17	61.6	2.3	6.5e-17	61.6	2.3	2.3	2	0	0	2	2	2	1	S1	RNA	binding	domain
YqgF	PF14639.6	gi|288561435|ref|YP_003424921.1|	-	1.1e-08	35.0	1.5	7.1e-08	32.4	0.1	2.8	2	0	0	2	2	2	1	Holliday-junction	resolvase-like	of	SPT6
HHH_7	PF14635.6	gi|288561435|ref|YP_003424921.1|	-	2.1e-08	34.4	0.2	1.1e-07	32.1	0.0	2.3	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
HHH_6	PF14579.6	gi|288561435|ref|YP_003424921.1|	-	0.022	15.0	0.0	0.092	13.0	0.0	2.1	2	0	0	2	2	2	0	Helix-hairpin-helix	motif
PhetRS_B1	PF18262.1	gi|288561435|ref|YP_003424921.1|	-	0.042	14.1	2.6	4.3	7.6	0.1	3.7	4	0	0	4	4	4	0	Phe-tRNA	synthetase	beta	subunit	B1	domain
HHH	PF00633.23	gi|288561435|ref|YP_003424921.1|	-	0.13	12.1	0.0	5.5	7.1	0.0	3.0	2	0	0	2	2	2	0	Helix-hairpin-helix	motif
T6_Ig_like	PF18002.1	gi|288561435|ref|YP_003424921.1|	-	0.89	9.4	4.7	1.7	8.5	0.2	2.9	3	0	0	3	3	3	0	T6	antigen	Ig	like	domain
Acyl_transf_3	PF01757.22	gi|288561436|ref|YP_003424922.1|	-	2.7e-23	82.6	46.6	4.9e-23	81.7	46.6	1.3	1	1	0	1	1	1	1	Acyltransferase	family
Glyphos_transf	PF04464.14	gi|288561437|ref|YP_003424923.1|	-	4.2e-105	351.7	7.3	8e-105	350.8	7.3	1.5	1	0	0	1	1	1	1	CDP-Glycerol:Poly(glycerophosphate)	glycerophosphotransferase
Glycos_transf_2	PF00535.26	gi|288561437|ref|YP_003424923.1|	-	1.8e-35	122.3	0.2	4.2e-35	121.1	0.2	1.6	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.9	gi|288561437|ref|YP_003424923.1|	-	1.1e-12	48.0	0.2	3.1e-12	46.6	0.2	1.8	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_3	PF13641.6	gi|288561437|ref|YP_003424923.1|	-	7e-11	42.5	0.0	3.3e-10	40.2	0.0	2.0	2	0	0	2	2	2	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|288561437|ref|YP_003424923.1|	-	0.0019	18.6	0.2	0.0057	17.2	0.2	1.7	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
SMI1_KNR4	PF09346.10	gi|288561437|ref|YP_003424923.1|	-	0.03	14.7	0.9	2.2	8.7	0.1	3.5	2	1	0	2	2	2	0	SMI1	/	KNR4	family	(SUKH-1)
Glyphos_transf	PF04464.14	gi|288561438|ref|YP_003424924.1|	-	1.1e-111	373.4	6.0	1.1e-111	373.4	6.0	2.0	2	0	0	2	2	2	1	CDP-Glycerol:Poly(glycerophosphate)	glycerophosphotransferase
Glycos_transf_2	PF00535.26	gi|288561438|ref|YP_003424924.1|	-	1.9e-33	115.7	0.1	5.7e-33	114.1	0.1	1.9	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.9	gi|288561438|ref|YP_003424924.1|	-	2.4e-11	43.6	0.2	7.4e-11	42.0	0.2	1.8	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_3	PF13641.6	gi|288561438|ref|YP_003424924.1|	-	8e-09	35.7	0.0	1.3e-08	35.0	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|288561438|ref|YP_003424924.1|	-	0.047	14.2	0.2	0.21	12.1	0.0	2.2	2	0	0	2	2	2	0	Glycosyl	transferase	family	2
TbpB_B_D	PF01298.18	gi|288561438|ref|YP_003424924.1|	-	0.25	11.8	7.3	7.7	6.9	3.9	2.9	1	1	1	2	2	2	0	C-lobe	and	N-lobe	beta	barrels	of	Tf-binding	protein	B
Glycos_transf_2	PF00535.26	gi|288561439|ref|YP_003424925.1|	-	4.3e-34	117.8	0.7	4.3e-34	117.8	0.7	2.2	3	0	0	3	3	3	1	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.9	gi|288561439|ref|YP_003424925.1|	-	9.3e-15	54.8	1.0	9.3e-15	54.8	1.0	2.9	2	1	0	2	2	2	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_3	PF13641.6	gi|288561439|ref|YP_003424925.1|	-	7.7e-11	42.3	0.0	1.2e-10	41.7	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|288561439|ref|YP_003424925.1|	-	0.0012	19.3	0.1	0.004	17.6	0.1	1.9	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
DivIC	PF04977.15	gi|288561439|ref|YP_003424925.1|	-	0.0051	16.5	22.1	0.066	13.0	1.5	3.9	2	1	1	3	3	3	3	Septum	formation	initiator
Cnn_1N	PF07989.11	gi|288561439|ref|YP_003424925.1|	-	0.0074	16.4	16.9	0.0074	16.4	16.9	2.6	2	0	0	2	2	2	1	Centrosomin	N-terminal	motif	1
UPF0242	PF06785.11	gi|288561439|ref|YP_003424925.1|	-	0.012	15.8	16.7	0.064	13.3	10.6	2.9	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0242)	N-terminus
ADIP	PF11559.8	gi|288561439|ref|YP_003424925.1|	-	0.24	11.5	18.4	0.024	14.7	11.6	2.4	2	0	0	2	2	2	0	Afadin-	and	alpha	-actinin-Binding
TMF_TATA_bd	PF12325.8	gi|288561439|ref|YP_003424925.1|	-	0.88	9.8	13.7	0.39	10.9	7.1	2.6	2	0	0	2	2	2	0	TATA	element	modulatory	factor	1	TATA	binding
APG6_N	PF17675.1	gi|288561439|ref|YP_003424925.1|	-	1.6	9.3	15.3	0.052	14.1	5.8	3.0	3	0	0	3	3	3	0	Apg6	coiled-coil	region
TSC22	PF01166.18	gi|288561439|ref|YP_003424925.1|	-	9	6.7	11.1	49	4.3	0.1	3.0	1	1	1	2	2	2	0	TSC-22/dip/bun	family
bZIP_1	PF00170.21	gi|288561439|ref|YP_003424925.1|	-	9.5	6.4	24.4	10	6.3	14.3	3.3	2	1	1	3	3	2	0	bZIP	transcription	factor
Acyl_transf_3	PF01757.22	gi|288561440|ref|YP_003424926.1|	-	2.7e-07	30.0	20.3	3.3e-07	29.7	20.3	1.0	1	0	0	1	1	1	1	Acyltransferase	family
GPI2	PF06432.11	gi|288561440|ref|YP_003424926.1|	-	1.1	8.6	8.8	6.8	6.1	3.3	2.2	1	1	1	2	2	2	0	Phosphatidylinositol	N-acetylglucosaminyltransferase
Acyl_transf_3	PF01757.22	gi|288561441|ref|YP_003424927.1|	-	1.8e-09	37.2	2.8	2.1e-09	36.9	2.8	1.0	1	0	0	1	1	1	1	Acyltransferase	family
AIRC	PF00731.20	gi|288561442|ref|YP_003424928.1|	-	8.5e-89	294.7	4.3	8.3e-48	161.7	0.7	2.0	2	0	0	2	2	2	2	AIR	carboxylase
Baculo_PP31	PF05311.11	gi|288561442|ref|YP_003424928.1|	-	0.015	14.8	2.1	0.99	8.8	0.3	2.2	2	0	0	2	2	2	0	Baculovirus	33KDa	late	protein	(PP31)
HEXIM	PF15313.6	gi|288561442|ref|YP_003424928.1|	-	0.12	12.5	1.8	0.2	11.8	1.8	1.2	1	0	0	1	1	1	0	Hexamethylene	bis-acetamide-inducible	protein
UbiD	PF01977.16	gi|288561443|ref|YP_003424929.1|	-	2.6e-103	346.0	0.2	2.9e-103	345.9	0.2	1.0	1	0	0	1	1	1	1	3-octaprenyl-4-hydroxybenzoate	carboxy-lyase
NAD_Gly3P_dh_N	PF01210.23	gi|288561444|ref|YP_003424930.1|	-	1.2e-37	129.4	0.1	2.4e-36	125.1	0.0	2.3	2	0	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
NAD_Gly3P_dh_C	PF07479.14	gi|288561444|ref|YP_003424930.1|	-	1.5e-31	109.5	2.8	1.6e-31	109.5	1.2	1.8	2	0	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	C-terminus
F420_oxidored	PF03807.17	gi|288561444|ref|YP_003424930.1|	-	4.2e-09	36.9	0.1	1.9e-08	34.8	0.0	2.2	3	0	0	3	3	3	1	NADP	oxidoreductase	coenzyme	F420-dependent
ApbA	PF02558.16	gi|288561444|ref|YP_003424930.1|	-	7.7e-09	35.4	0.0	1.3e-08	34.7	0.0	1.3	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
NAD_binding_2	PF03446.15	gi|288561444|ref|YP_003424930.1|	-	2e-05	24.8	0.0	3.7e-05	23.9	0.0	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
3HCDH_N	PF02737.18	gi|288561444|ref|YP_003424930.1|	-	3.6e-05	23.7	0.3	0.00016	21.6	0.3	2.0	1	1	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Semialdhyde_dh	PF01118.24	gi|288561444|ref|YP_003424930.1|	-	0.00012	22.5	0.0	0.00024	21.5	0.0	1.5	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
PDH	PF02153.17	gi|288561444|ref|YP_003424930.1|	-	0.0014	17.7	0.0	0.0035	16.4	0.0	1.7	2	0	0	2	2	2	1	Prephenate	dehydrogenase
DNA_pol3_a_NII	PF11490.8	gi|288561444|ref|YP_003424930.1|	-	0.0069	16.3	0.4	0.066	13.1	0.0	2.4	2	1	1	3	3	3	1	DNA	polymerase	III	polC-type	N-terminus	II
Rossmann-like	PF10727.9	gi|288561444|ref|YP_003424930.1|	-	0.036	13.9	0.1	0.13	12.1	0.1	2.0	1	1	0	1	1	1	0	Rossmann-like	domain
Shikimate_DH	PF01488.20	gi|288561444|ref|YP_003424930.1|	-	0.064	13.3	2.5	0.26	11.4	0.1	3.1	4	1	0	4	4	4	0	Shikimate	/	quinate	5-dehydrogenase
2-Hacid_dh_C	PF02826.19	gi|288561444|ref|YP_003424930.1|	-	0.16	11.3	0.3	0.37	10.1	0.3	1.8	1	1	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Chlam_PMP	PF02415.17	gi|288561445|ref|YP_003424931.1|	-	6.6e-10	38.8	67.7	0.0028	18.0	1.4	9.2	9	0	0	9	9	9	7	Chlamydia	polymorphic	membrane	protein	(Chlamydia_PMP)	repeat
NTP_transferase	PF00483.23	gi|288561446|ref|YP_003424932.1|	-	1.5e-16	60.7	0.0	2e-16	60.4	0.0	1.2	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.7	gi|288561446|ref|YP_003424932.1|	-	2.5e-11	44.2	0.0	3.2e-11	43.8	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.19	gi|288561446|ref|YP_003424932.1|	-	8.5e-05	22.4	0.0	0.0001	22.1	0.0	1.2	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
Glyco_tranf_2_3	PF13641.6	gi|288561446|ref|YP_003424932.1|	-	0.00069	19.6	0.1	0.0011	19.0	0.1	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyphos_transf	PF04464.14	gi|288561447|ref|YP_003424933.1|	-	2e-114	382.4	15.1	2.3e-114	382.2	15.1	1.0	1	0	0	1	1	1	1	CDP-Glycerol:Poly(glycerophosphate)	glycerophosphotransferase
EB1	PF03271.17	gi|288561447|ref|YP_003424933.1|	-	0.043	14.1	0.8	2.3	8.5	0.1	2.9	2	0	0	2	2	2	0	EB1-like	C-terminal	motif
Radical_SAM	PF04055.21	gi|288561448|ref|YP_003424934.1|	-	1.5e-14	54.8	0.1	2.3e-14	54.1	0.1	1.3	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|288561448|ref|YP_003424934.1|	-	0.0011	19.2	0.1	0.0011	19.2	0.1	2.3	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
DZR	PF12773.7	gi|288561448|ref|YP_003424934.1|	-	0.0095	15.9	5.3	0.0095	15.9	5.3	2.9	3	0	0	3	3	3	1	Double	zinc	ribbon
IFN-gamma	PF00714.17	gi|288561448|ref|YP_003424934.1|	-	0.047	13.5	0.4	4.5	7.1	0.1	2.5	2	0	0	2	2	2	0	Interferon	gamma
zinc_ribbon_2	PF13240.6	gi|288561448|ref|YP_003424934.1|	-	0.056	13.2	0.7	0.056	13.2	0.7	3.5	4	0	0	4	4	4	0	zinc-ribbon	domain
Fer4_14	PF13394.6	gi|288561448|ref|YP_003424934.1|	-	0.15	12.2	0.1	0.15	12.2	0.1	2.3	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
TF_Zn_Ribbon	PF08271.12	gi|288561448|ref|YP_003424934.1|	-	0.27	10.8	9.5	0.66	9.5	0.1	4.1	4	0	0	4	4	4	0	TFIIB	zinc-binding
Zn-ribbon_8	PF09723.10	gi|288561448|ref|YP_003424934.1|	-	2.3	8.4	0.0	2.3	8.4	0.0	3.7	4	0	0	4	4	4	0	Zinc	ribbon	domain
zf-ribbon_3	PF13248.6	gi|288561448|ref|YP_003424934.1|	-	3.3	7.3	10.8	0.35	10.3	0.3	2.9	3	0	0	3	3	3	0	zinc-ribbon	domain
AIRS	PF00586.24	gi|288561449|ref|YP_003424935.1|	-	1e-19	71.0	0.0	1.5e-19	70.4	0.0	1.3	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
DUF5348	PF17295.2	gi|288561449|ref|YP_003424935.1|	-	0.035	14.0	0.3	0.37	10.7	0.0	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF5348)
SDH_sah	PF01972.16	gi|288561450|ref|YP_003424936.1|	-	2.6e-22	79.2	0.1	2.4e-21	76.0	0.1	2.0	1	1	0	1	1	1	1	Serine	dehydrogenase	proteinase
CLP_protease	PF00574.23	gi|288561450|ref|YP_003424936.1|	-	0.0033	17.3	0.4	0.0064	16.4	0.4	1.5	2	0	0	2	2	2	1	Clp	protease
Peptidase_C69	PF03577.15	gi|288561452|ref|YP_003424938.1|	-	6.9e-10	38.4	0.2	7.6e-10	38.3	0.2	1.0	1	0	0	1	1	1	1	Peptidase	family	C69
SNF	PF00209.18	gi|288561453|ref|YP_003424939.1|	-	1.7e-79	267.9	54.6	1.9e-45	155.6	32.8	2.0	1	1	1	2	2	2	2	Sodium:neurotransmitter	symporter	family
Acetyltransf_1	PF00583.25	gi|288561454|ref|YP_003424940.1|	-	3.2e-16	59.6	0.1	4.5e-16	59.1	0.1	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.7	gi|288561454|ref|YP_003424940.1|	-	1.6e-11	44.3	0.0	1.8e-11	44.1	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.7	gi|288561454|ref|YP_003424940.1|	-	5.2e-10	39.6	0.1	7.8e-10	39.1	0.1	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.7	gi|288561454|ref|YP_003424940.1|	-	1e-08	35.4	0.8	1.3e-08	35.2	0.8	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.10	gi|288561454|ref|YP_003424940.1|	-	6.6e-08	32.4	0.0	1.3e-07	31.5	0.0	1.4	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_CG	PF14542.6	gi|288561454|ref|YP_003424940.1|	-	6.8e-05	22.9	0.0	0.00011	22.2	0.0	1.3	1	0	0	1	1	1	1	GCN5-related	N-acetyl-transferase
Acetyltransf_3	PF13302.7	gi|288561454|ref|YP_003424940.1|	-	0.00013	22.6	0.0	0.00014	22.5	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
GNAT_acetyltran	PF12746.7	gi|288561454|ref|YP_003424940.1|	-	0.00025	20.7	0.0	0.00026	20.6	0.0	1.1	1	0	0	1	1	1	1	GNAT	acetyltransferase
Acetyltransf_13	PF13880.6	gi|288561454|ref|YP_003424940.1|	-	0.0041	17.1	0.0	0.0064	16.5	0.0	1.3	1	0	0	1	1	1	1	ESCO1/2	acetyl-transferase
Acetyltransf_15	PF17013.5	gi|288561454|ref|YP_003424940.1|	-	0.0072	15.8	2.2	0.011	15.2	2.2	1.4	1	1	0	1	1	1	1	Putative	acetyl-transferase
Fusion_F0	PF13044.6	gi|288561454|ref|YP_003424940.1|	-	0.097	11.3	0.1	0.11	11.1	0.1	1.0	1	0	0	1	1	1	0	Fusion	glycoprotein	F0,	Isavirus
dCMP_cyt_deam_1	PF00383.23	gi|288561455|ref|YP_003424941.1|	-	3.2e-26	91.1	0.0	4e-26	90.8	0.0	1.1	1	0	0	1	1	1	1	Cytidine	and	deoxycytidylate	deaminase	zinc-binding	region
MafB19-deam	PF14437.6	gi|288561455|ref|YP_003424941.1|	-	3.5e-23	81.9	0.1	4.3e-23	81.6	0.1	1.1	1	0	0	1	1	1	1	MafB19-like	deaminase
APOBEC2	PF18772.1	gi|288561455|ref|YP_003424941.1|	-	1.2e-06	28.7	0.1	8.3e-05	22.7	0.1	2.1	1	1	0	1	1	1	1	APOBEC2
APOBEC3	PF18771.1	gi|288561455|ref|YP_003424941.1|	-	2.2e-06	27.8	0.1	3.8e-05	23.8	0.0	2.0	2	0	0	2	2	2	1	APOBEC3
NAD1	PF18778.1	gi|288561455|ref|YP_003424941.1|	-	3.5e-06	27.2	0.2	0.00053	20.1	0.2	2.1	1	1	0	1	1	1	1	Novel	AID	APOBEC	clade	1
NAD2	PF18782.1	gi|288561455|ref|YP_003424941.1|	-	8.1e-06	26.1	0.0	0.00028	21.0	0.0	2.0	1	1	0	1	1	1	1	Novel	AID	APOBEC	clade	2
SNAD4	PF18750.1	gi|288561455|ref|YP_003424941.1|	-	1.1e-05	25.5	0.0	2.6e-05	24.3	0.0	1.6	2	0	0	2	2	2	1	Secreted	Novel	AID/APOBEC-like	Deaminase	4
APOBEC_N	PF08210.11	gi|288561455|ref|YP_003424941.1|	-	0.00024	21.0	0.3	0.0097	15.8	0.3	2.0	1	1	0	1	1	1	1	APOBEC-like	N-terminal	domain
XOO_2897-deam	PF14440.6	gi|288561455|ref|YP_003424941.1|	-	0.003	17.6	0.0	0.006	16.7	0.0	1.5	1	0	0	1	1	1	1	Xanthomonas	XOO_2897-like	deaminase
APOBEC4_like	PF18774.1	gi|288561455|ref|YP_003424941.1|	-	0.0052	16.7	0.0	0.041	13.8	0.0	2.0	1	1	0	1	1	1	1	APOBEC4-like	-AID/APOBEC-deaminase
Bd3614-deam	PF14439.6	gi|288561455|ref|YP_003424941.1|	-	0.038	14.1	1.2	0.6	10.2	0.5	2.2	1	1	1	2	2	2	0	Bd3614-like	deaminase
Toxin-deaminase	PF14424.6	gi|288561455|ref|YP_003424941.1|	-	0.054	13.6	0.0	0.08	13.0	0.0	1.2	1	0	0	1	1	1	0	The	BURPS668_1122	family	of	deaminases
Thioredoxin_8	PF13905.6	gi|288561455|ref|YP_003424941.1|	-	0.11	12.8	0.1	0.24	11.7	0.0	1.6	1	1	0	1	1	1	0	Thioredoxin-like
CbiX	PF01903.17	gi|288561456|ref|YP_003424942.1|	-	6.2e-41	139.1	0.3	1.3e-19	70.5	0.0	2.6	2	1	0	2	2	2	2	CbiX
Ferrochelatase	PF00762.19	gi|288561456|ref|YP_003424942.1|	-	0.001	18.2	0.0	0.89	8.6	0.0	3.2	2	1	0	2	2	2	2	Ferrochelatase
OB_aCoA_assoc	PF01796.17	gi|288561457|ref|YP_003424943.1|	-	6.5e-20	70.9	0.0	8.7e-20	70.5	0.0	1.2	1	0	0	1	1	1	1	DUF35	OB-fold	domain,	acyl-CoA-associated
DUF35_N	PF12172.8	gi|288561457|ref|YP_003424943.1|	-	1.2e-10	41.0	0.8	1.6e-10	40.6	0.8	1.2	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zinc_ribbon_4	PF13717.6	gi|288561457|ref|YP_003424943.1|	-	0.0024	17.8	5.2	0.12	12.3	0.2	2.5	2	0	0	2	2	2	2	zinc-ribbon	domain
Prok-RING_1	PF14446.6	gi|288561457|ref|YP_003424943.1|	-	0.0098	15.8	1.7	0.015	15.2	1.7	1.3	1	0	0	1	1	1	1	Prokaryotic	RING	finger	family	1
Auto_anti-p27	PF06677.12	gi|288561457|ref|YP_003424943.1|	-	0.047	13.9	0.5	0.081	13.1	0.5	1.4	1	0	0	1	1	1	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
Thioredoxin_3	PF13192.6	gi|288561457|ref|YP_003424943.1|	-	0.093	12.8	0.0	0.19	11.8	0.0	1.6	1	0	0	1	1	1	0	Thioredoxin	domain
ABC2_membrane_3	PF12698.7	gi|288561458|ref|YP_003424944.1|	-	1.2	8.1	6.3	0.18	10.9	0.2	2.1	1	1	1	2	2	2	0	ABC-2	family	transporter	protein
PIN	PF01850.21	gi|288561461|ref|YP_003424947.1|	-	3.1e-15	56.8	0.9	3.5e-15	56.6	0.9	1.0	1	0	0	1	1	1	1	PIN	domain
Ribonuclease_T2	PF00445.18	gi|288561461|ref|YP_003424947.1|	-	0.097	12.9	1.2	0.12	12.6	1.2	1.1	1	0	0	1	1	1	0	Ribonuclease	T2	family
FtsX	PF02687.21	gi|288561462|ref|YP_003424948.1|	-	1.5e-16	60.6	15.3	4.3e-10	39.9	3.4	5.0	6	0	0	6	6	6	2	FtsX-like	permease	family
DHFR_1	PF00186.19	gi|288561462|ref|YP_003424948.1|	-	0.0055	16.4	0.0	0.018	14.7	0.0	1.8	2	0	0	2	2	2	1	Dihydrofolate	reductase
OATP	PF03137.20	gi|288561462|ref|YP_003424948.1|	-	0.011	14.0	1.5	0.021	13.1	1.5	1.5	1	0	0	1	1	1	0	Organic	Anion	Transporter	Polypeptide	(OATP)	family
DUF1772	PF08592.11	gi|288561462|ref|YP_003424948.1|	-	0.23	11.8	4.0	0.2	12.0	0.9	2.5	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF1772)
ABC_tran	PF00005.27	gi|288561463|ref|YP_003424949.1|	-	9.3e-36	123.4	0.0	1.5e-35	122.7	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
SMC_N	PF02463.19	gi|288561463|ref|YP_003424949.1|	-	1.1e-07	31.5	1.0	2e-06	27.4	1.0	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
RsgA_GTPase	PF03193.16	gi|288561463|ref|YP_003424949.1|	-	2.2e-05	24.4	0.7	4.3e-05	23.5	0.1	1.8	2	0	0	2	2	2	1	RsgA	GTPase
AAA_13	PF13166.6	gi|288561463|ref|YP_003424949.1|	-	0.0005	18.9	0.0	0.013	14.2	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.6	gi|288561463|ref|YP_003424949.1|	-	0.00067	20.1	0.0	0.00099	19.5	0.0	1.3	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_21	PF13304.6	gi|288561463|ref|YP_003424949.1|	-	0.00069	19.5	2.6	0.029	14.2	1.0	2.3	1	1	0	2	2	2	1	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_29	PF13555.6	gi|288561463|ref|YP_003424949.1|	-	0.00085	19.0	0.1	0.0016	18.1	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_25	PF13481.6	gi|288561463|ref|YP_003424949.1|	-	0.0026	17.3	1.2	0.23	11.0	0.1	2.2	2	0	0	2	2	2	1	AAA	domain
Rad17	PF03215.15	gi|288561463|ref|YP_003424949.1|	-	0.0061	16.5	0.0	0.011	15.7	0.0	1.5	1	0	0	1	1	1	1	Rad17	P-loop	domain
MMR_HSR1	PF01926.23	gi|288561463|ref|YP_003424949.1|	-	0.0075	16.3	1.2	0.035	14.2	1.2	2.3	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
AAA_30	PF13604.6	gi|288561463|ref|YP_003424949.1|	-	0.0091	15.7	0.2	0.057	13.1	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
IstB_IS21	PF01695.17	gi|288561463|ref|YP_003424949.1|	-	0.0096	15.7	0.1	0.056	13.2	0.0	2.1	2	1	0	2	2	2	1	IstB-like	ATP	binding	protein
RNA12	PF10443.9	gi|288561463|ref|YP_003424949.1|	-	0.011	14.5	0.0	0.017	13.9	0.0	1.3	1	0	0	1	1	1	0	RNA12	protein
AAA_23	PF13476.6	gi|288561463|ref|YP_003424949.1|	-	0.011	16.2	0.9	0.013	16.0	0.9	1.6	1	1	0	1	1	1	0	AAA	domain
Dynamin_N	PF00350.23	gi|288561463|ref|YP_003424949.1|	-	0.018	15.1	1.7	0.05	13.7	1.7	2.1	1	1	0	1	1	1	0	Dynamin	family
AAA_22	PF13401.6	gi|288561463|ref|YP_003424949.1|	-	0.022	15.0	0.2	0.047	14.0	0.2	1.9	1	1	0	1	1	1	0	AAA	domain
MutS_V	PF00488.21	gi|288561463|ref|YP_003424949.1|	-	0.031	14.3	0.1	2.5	8.1	0.0	2.2	2	0	0	2	2	2	0	MutS	domain	V
AAA_18	PF13238.6	gi|288561463|ref|YP_003424949.1|	-	0.035	14.7	0.2	0.06	13.9	0.2	1.8	1	1	0	1	1	1	0	AAA	domain
AAA_24	PF13479.6	gi|288561463|ref|YP_003424949.1|	-	0.067	12.9	0.0	0.12	12.1	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_28	PF13521.6	gi|288561463|ref|YP_003424949.1|	-	0.076	13.2	0.0	0.24	11.6	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
T2SSE	PF00437.20	gi|288561463|ref|YP_003424949.1|	-	0.089	11.8	0.0	0.16	11.0	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
G-alpha	PF00503.20	gi|288561463|ref|YP_003424949.1|	-	0.097	11.8	0.0	0.11	11.6	0.0	1.1	1	0	0	1	1	1	0	G-protein	alpha	subunit
AAA_27	PF13514.6	gi|288561463|ref|YP_003424949.1|	-	0.11	12.1	0.1	0.21	11.2	0.1	1.4	1	0	0	1	1	1	0	AAA	domain
Metallophos_3	PF14582.6	gi|288561463|ref|YP_003424949.1|	-	0.12	11.7	0.1	1.1	8.6	0.0	2.2	2	1	1	3	3	3	0	Metallophosphoesterase,	calcineurin	superfamily
RNA_helicase	PF00910.22	gi|288561463|ref|YP_003424949.1|	-	0.15	12.4	0.0	0.38	11.2	0.0	1.8	2	0	0	2	2	1	0	RNA	helicase
AAA_33	PF13671.6	gi|288561463|ref|YP_003424949.1|	-	0.2	11.8	0.2	0.39	10.9	0.1	1.7	2	1	0	2	2	2	0	AAA	domain
MgtE	PF01769.16	gi|288561464|ref|YP_003424950.1|	-	1.1e-35	122.7	23.9	4.9e-19	68.9	7.2	3.9	3	1	1	4	4	4	2	Divalent	cation	transporter
TrkA_C	PF02080.21	gi|288561465|ref|YP_003424951.1|	-	9e-11	41.5	0.4	1.6e-10	40.6	0.4	1.4	1	0	0	1	1	1	1	TrkA-C	domain
PhoU	PF01895.19	gi|288561465|ref|YP_003424951.1|	-	3.8e-10	40.1	5.7	3.8e-10	40.1	5.7	1.7	2	0	0	2	2	2	1	PhoU	domain
zf-like	PF04071.12	gi|288561466|ref|YP_003424952.1|	-	1.8e-18	66.2	5.0	3.3e-18	65.4	5.0	1.3	1	0	0	1	1	1	1	Cysteine-rich	small	domain
TP_methylase	PF00590.20	gi|288561466|ref|YP_003424952.1|	-	1.4e-14	54.5	0.0	4.1e-09	36.7	0.0	2.1	2	0	0	2	2	2	2	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
Macoilin	PF09726.9	gi|288561467|ref|YP_003424953.1|	-	9.9	4.6	6.3	10	4.5	6.3	1.1	1	0	0	1	1	1	0	Macoilin	family
DNA_pol_E_B	PF04042.16	gi|288561468|ref|YP_003424954.1|	-	8.4e-16	58.0	0.0	1.7e-15	56.9	0.0	1.5	1	0	0	1	1	1	1	DNA	polymerase	alpha/epsilon	subunit	B
Metallophos	PF00149.28	gi|288561468|ref|YP_003424954.1|	-	9.1e-12	45.9	0.4	1.6e-11	45.1	0.4	1.4	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|288561468|ref|YP_003424954.1|	-	1.4e-05	25.4	0.7	3.4e-05	24.1	0.7	1.7	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
tRNA_anti-codon	PF01336.25	gi|288561468|ref|YP_003424954.1|	-	0.006	16.5	0.0	0.013	15.5	0.0	1.5	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
DUF4539	PF15072.6	gi|288561468|ref|YP_003424954.1|	-	0.12	12.4	0.1	0.32	11.1	0.1	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4539)
Aldolase_II	PF00596.21	gi|288561469|ref|YP_003424955.1|	-	5.3e-45	153.6	0.0	6e-45	153.5	0.0	1.0	1	0	0	1	1	1	1	Class	II	Aldolase	and	Adducin	N-terminal	domain
LigB	PF02900.18	gi|288561469|ref|YP_003424955.1|	-	0.053	12.6	0.0	0.076	12.1	0.0	1.3	1	0	0	1	1	1	0	Catalytic	LigB	subunit	of	aromatic	ring-opening	dioxygenase
TrmO	PF01980.16	gi|288561470|ref|YP_003424956.1|	-	2.9e-38	130.7	0.0	3.9e-38	130.3	0.0	1.1	1	0	0	1	1	1	1	tRNA-methyltransferase	O
UPF0147	PF03685.13	gi|288561471|ref|YP_003424957.1|	-	1.6e-34	117.8	2.5	1.8e-34	117.6	2.5	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0147)
UPF0121	PF03661.13	gi|288561471|ref|YP_003424957.1|	-	0.011	15.1	0.1	0.15	11.5	0.0	1.9	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0121)
TEX13	PF15186.6	gi|288561471|ref|YP_003424957.1|	-	0.023	14.4	0.0	0.063	13.0	0.0	1.7	1	1	0	2	2	2	0	Testis-expressed	sequence	13	protein	family
QLQ	PF08880.11	gi|288561471|ref|YP_003424957.1|	-	0.13	12.1	0.0	0.22	11.3	0.0	1.4	1	0	0	1	1	1	0	QLQ
HIRAN	PF08797.11	gi|288561472|ref|YP_003424958.1|	-	9.1e-07	28.7	0.0	1.4e-06	28.2	0.0	1.4	1	1	0	1	1	1	1	HIRAN	domain
Glucodextran_B	PF09136.10	gi|288561472|ref|YP_003424958.1|	-	0.023	15.1	0.2	0.031	14.7	0.2	1.2	1	0	0	1	1	1	0	Glucodextranase,	domain	B
CobD_Cbib	PF03186.13	gi|288561474|ref|YP_003424960.1|	-	1.6e-83	280.1	1.6	2.1e-83	279.7	1.6	1.1	1	0	0	1	1	1	1	CobD/Cbib	protein
DUF2299	PF10061.9	gi|288561475|ref|YP_003424961.1|	-	2.3e-44	150.5	4.0	2.6e-44	150.3	4.0	1.0	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2299)
MRP-S23	PF10484.9	gi|288561475|ref|YP_003424961.1|	-	0.065	13.5	0.5	0.1	12.8	0.4	1.6	1	1	0	1	1	1	0	Mitochondrial	ribosomal	protein	S23
#
# Program:         hmmscan
# Version:         3.2.1 (June 2018)
# Pipeline mode:   SCAN
# Query file:      /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanobrevibacter_ruminantium_M1_uid45857/NC_013790.faa
# Target file:     /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm
# Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanobrevibacter_ruminantium_M1_uid45857/NC_013790.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanobrevibacter_ruminantium_M1_uid45857/NC_013790.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Methanobrevibacter_ruminantium_M1_uid45857/NC_013790.faa 
# Current dir:     /oak/stanford/groups/akundaje/marinovg/genomes
# Date:            Mon Mar 25 15:50:12 2019
# [ok]