#                                                                           --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
# target name        accession  query name                       accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target
#------------------- ----------             -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------
GerE	PF00196.14	gi|385805045|ref|YP_005841444.1|	-	0.078	12.3	0.0	0.14	11.5	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
TrmB	PF01978.14	gi|385805046|ref|YP_005841445.1|	-	0.027	14.1	0.0	0.088	12.5	0.0	1.8	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_15	PF12324.3	gi|385805046|ref|YP_005841445.1|	-	0.11	12.1	0.1	0.42	10.3	0.0	2.0	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	alkylmercury	lyase
HTH_11	PF08279.7	gi|385805046|ref|YP_005841445.1|	-	0.14	11.8	0.0	0.47	10.1	0.0	1.8	2	0	0	2	2	2	0	HTH	domain
DUF4450	PF14614.1	gi|385805047|ref|YP_005841446.1|	-	0.063	12.4	0.0	0.081	12.0	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4450)
AAA_25	PF13481.1	gi|385805048|ref|YP_005841447.1|	-	0.058	12.7	0.8	1.4	8.2	0.3	2.2	1	1	1	2	2	2	0	AAA	domain
AAA	PF00004.24	gi|385805048|ref|YP_005841447.1|	-	0.078	13.1	0.0	0.13	12.4	0.0	1.4	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Iron_permease	PF04120.7	gi|385805048|ref|YP_005841447.1|	-	0.088	12.3	0.3	0.16	11.5	0.2	1.3	1	0	0	1	1	1	0	Low	affinity	iron	permease
RHH_1	PF01402.16	gi|385805050|ref|YP_005841449.1|	-	0.00031	20.5	0.3	0.00063	19.5	0.2	1.5	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
Hemerythrin	PF01814.18	gi|385805050|ref|YP_005841449.1|	-	0.049	13.7	0.0	0.072	13.2	0.0	1.3	1	1	0	1	1	1	0	Hemerythrin	HHE	cation	binding	domain