# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Cdc6_C PF09079.11 gi|568162878|ref|YP_008946166.1| - 1.2e-13 50.9 0.0 2.4e-13 49.9 0.0 1.5 1 0 0 1 1 1 1 CDC6, C terminal winged helix domain AAA_22 PF13401.6 gi|568162878|ref|YP_008946166.1| - 2.3e-09 37.6 0.0 7.5e-09 36.0 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA PF00004.29 gi|568162878|ref|YP_008946166.1| - 1.3e-05 25.6 0.0 4.1e-05 24.0 0.0 1.9 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.22 gi|568162878|ref|YP_008946166.1| - 0.0028 16.9 0.0 0.0049 16.1 0.0 1.4 1 0 0 1 1 1 1 NB-ARC domain AAA_16 PF13191.6 gi|568162878|ref|YP_008946166.1| - 0.0083 16.5 0.0 0.027 14.9 0.0 1.9 2 1 0 2 2 2 1 AAA ATPase domain DUF2075 PF09848.9 gi|568162878|ref|YP_008946166.1| - 0.011 15.0 0.0 0.019 14.2 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Sigma54_activat PF00158.26 gi|568162878|ref|YP_008946166.1| - 0.012 15.4 0.0 0.036 13.8 0.0 1.8 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_assoc_2 PF16193.5 gi|568162878|ref|YP_008946166.1| - 0.033 14.5 0.1 0.11 12.9 0.1 1.9 1 0 0 1 1 1 0 AAA C-terminal domain AAA_7 PF12775.7 gi|568162878|ref|YP_008946166.1| - 0.035 13.6 0.1 0.17 11.3 0.0 1.9 2 0 0 2 2 2 0 P-loop containing dynein motor region Microtub_bd PF16796.5 gi|568162878|ref|YP_008946166.1| - 0.093 12.7 0.3 0.27 11.2 0.0 1.9 2 0 0 2 2 2 0 Microtubule binding ResIII PF04851.15 gi|568162878|ref|YP_008946166.1| - 0.1 12.6 0.0 0.37 10.8 0.0 2.0 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit IstB_IS21 PF01695.17 gi|568162878|ref|YP_008946166.1| - 0.11 12.2 0.0 6.9 6.4 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein bMG6 PF17962.1 gi|568162879|ref|YP_008946167.1| - 0.012 15.8 0.1 0.016 15.4 0.1 1.1 1 0 0 1 1 1 0 Bacterial macroglobulin domain 6 Nas2_N PF18265.1 gi|568162879|ref|YP_008946167.1| - 0.018 14.9 1.1 0.27 11.2 0.1 2.2 2 0 0 2 2 2 0 Nas2 N_terminal domain NPV_P10 PF05531.12 gi|568162879|ref|YP_008946167.1| - 0.025 15.0 1.0 0.39 11.2 0.2 2.1 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein MerR-DNA-bind PF09278.11 gi|568162879|ref|YP_008946167.1| - 0.04 14.5 1.0 0.15 12.6 0.1 2.1 2 1 0 2 2 2 0 MerR, DNA binding FadA PF09403.10 gi|568162879|ref|YP_008946167.1| - 0.17 12.4 3.0 2.3 8.7 0.0 2.2 2 0 0 2 2 2 0 Adhesion protein FadA Fungal_TACC PF12709.7 gi|568162879|ref|YP_008946167.1| - 3.6 8.1 7.6 8.1 7.0 2.7 2.4 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins TM_helix PF05552.12 gi|568162880|ref|YP_008946168.1| - 3.5e-12 46.1 14.8 6.4e-10 38.9 5.2 5.1 6 0 0 6 6 6 2 Conserved TM helix HTH_5 PF01022.20 gi|568162883|ref|YP_008946171.1| - 1.2e-13 50.7 0.0 1.7e-13 50.2 0.0 1.2 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|568162883|ref|YP_008946171.1| - 2.4e-10 40.3 0.0 3.3e-10 39.9 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|568162883|ref|YP_008946171.1| - 4e-08 33.0 0.6 5.4e-08 32.6 0.6 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|568162883|ref|YP_008946171.1| - 1e-05 25.0 0.0 3.3e-05 23.4 0.0 1.8 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 gi|568162883|ref|YP_008946171.1| - 2e-05 24.4 0.1 2.9e-05 23.9 0.1 1.2 1 0 0 1 1 1 1 HTH domain HTH_45 PF14947.6 gi|568162883|ref|YP_008946171.1| - 6.3e-05 22.9 0.5 8.1e-05 22.5 0.5 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix Penicillinase_R PF03965.16 gi|568162883|ref|YP_008946171.1| - 0.00036 20.8 0.3 0.00055 20.3 0.2 1.3 1 1 0 1 1 1 1 Penicillinase repressor HTH_IclR PF09339.10 gi|568162883|ref|YP_008946171.1| - 0.00053 19.7 0.0 0.00076 19.2 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_12 PF08461.10 gi|568162883|ref|YP_008946171.1| - 0.00098 19.0 0.1 0.0013 18.6 0.1 1.4 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain MarR_2 PF12802.7 gi|568162883|ref|YP_008946171.1| - 0.0031 17.4 0.0 0.0042 16.9 0.0 1.1 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.6 gi|568162883|ref|YP_008946171.1| - 0.0037 17.4 0.2 0.0045 17.1 0.2 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain Phage_rep_org_N PF09681.10 gi|568162883|ref|YP_008946171.1| - 0.0049 16.8 0.0 0.0055 16.6 0.0 1.2 1 0 0 1 1 1 1 N-terminal phage replisome organiser (Phage_rep_org_N) DUF2513 PF10711.9 gi|568162883|ref|YP_008946171.1| - 0.008 16.5 0.1 0.012 15.9 0.1 1.2 1 0 0 1 1 1 1 Hypothetical protein (DUF2513) TFIIE_alpha PF02002.17 gi|568162883|ref|YP_008946171.1| - 0.011 15.6 0.1 0.011 15.5 0.1 1.1 1 0 0 1 1 1 0 TFIIE alpha subunit DUF4423 PF14394.6 gi|568162883|ref|YP_008946171.1| - 0.011 15.5 0.1 0.013 15.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) ArsR PF09824.9 gi|568162883|ref|YP_008946171.1| - 0.023 14.3 0.2 0.024 14.2 0.2 1.1 1 0 0 1 1 1 0 ArsR transcriptional regulator Sigma70_r4_2 PF08281.12 gi|568162883|ref|YP_008946171.1| - 0.025 14.2 0.1 0.14 11.9 0.1 2.0 1 1 0 1 1 1 0 Sigma-70, region 4 Fe_dep_repress PF01325.19 gi|568162883|ref|YP_008946171.1| - 0.028 14.6 0.1 0.037 14.2 0.1 1.2 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain PadR PF03551.14 gi|568162883|ref|YP_008946171.1| - 0.059 13.3 0.1 0.31 11.0 0.1 2.0 1 1 0 1 1 1 0 Transcriptional regulator PadR-like family MarR PF01047.22 gi|568162883|ref|YP_008946171.1| - 0.062 13.2 0.0 0.079 12.9 0.0 1.2 1 0 0 1 1 1 0 MarR family HTH_27 PF13463.6 gi|568162883|ref|YP_008946171.1| - 0.076 13.5 0.1 0.1 13.1 0.1 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_10 PF04967.12 gi|568162883|ref|YP_008946171.1| - 0.081 12.7 0.0 0.14 12.0 0.0 1.4 1 1 0 1 1 1 0 HTH DNA binding domain Rrf2 PF02082.20 gi|568162883|ref|YP_008946171.1| - 0.088 13.2 0.0 0.12 12.8 0.0 1.2 1 0 0 1 1 1 0 Transcriptional regulator DUF2089 PF09862.9 gi|568162883|ref|YP_008946171.1| - 0.098 12.7 0.2 0.22 11.6 0.1 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF2089) FaeA PF04703.12 gi|568162883|ref|YP_008946171.1| - 0.14 12.6 0.1 0.17 12.3 0.1 1.2 1 0 0 1 1 1 0 FaeA-like protein LexA_DNA_bind PF01726.16 gi|568162883|ref|YP_008946171.1| - 0.17 11.6 0.0 0.25 11.1 0.0 1.3 1 0 0 1 1 1 0 LexA DNA binding domain DUF742 PF05331.11 gi|568162883|ref|YP_008946171.1| - 0.18 11.6 0.0 0.2 11.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF742) CN_hydrolase PF00795.22 gi|568162884|ref|YP_008946173.1| - 7e-25 87.8 0.0 9.1e-25 87.5 0.0 1.1 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase NAD_synthase PF02540.17 gi|568162885|ref|YP_008946174.1| - 6.2e-75 251.4 0.0 7.1e-75 251.2 0.0 1.0 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.16 gi|568162885|ref|YP_008946174.1| - 0.00017 20.5 0.0 0.0065 15.3 0.0 2.1 2 0 0 2 2 2 1 tRNA methyl transferase ThiI PF02568.14 gi|568162885|ref|YP_008946174.1| - 0.0036 16.9 0.0 0.0054 16.3 0.0 1.2 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) Sigma70_r4 PF04545.16 gi|568162885|ref|YP_008946174.1| - 0.021 14.3 0.1 0.048 13.2 0.1 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 QueC PF06508.13 gi|568162885|ref|YP_008946174.1| - 0.047 13.2 0.0 0.14 11.6 0.0 1.8 2 0 0 2 2 2 0 Queuosine biosynthesis protein QueC Asn_synthase PF00733.21 gi|568162885|ref|YP_008946174.1| - 0.06 13.0 0.0 0.067 12.8 0.0 1.1 1 0 0 1 1 1 0 Asparagine synthase NTPase_1 PF03266.15 gi|568162887|ref|YP_008946176.1| - 4.6e-51 173.0 0.0 5.4e-51 172.8 0.0 1.0 1 0 0 1 1 1 1 NTPase AAA PF00004.29 gi|568162887|ref|YP_008946176.1| - 4e-05 24.0 0.0 6.9e-05 23.3 0.0 1.4 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Pox_A32 PF04665.12 gi|568162887|ref|YP_008946176.1| - 0.00011 21.8 0.1 0.013 15.0 0.0 2.2 2 0 0 2 2 2 1 Poxvirus A32 protein AAA_16 PF13191.6 gi|568162887|ref|YP_008946176.1| - 0.00016 22.1 0.0 0.0002 21.8 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_24 PF13479.6 gi|568162887|ref|YP_008946176.1| - 0.00034 20.4 0.3 0.0043 16.8 0.1 2.1 2 0 0 2 2 2 1 AAA domain NACHT PF05729.12 gi|568162887|ref|YP_008946176.1| - 0.00078 19.4 0.0 0.0022 17.9 0.0 1.6 2 0 0 2 2 2 1 NACHT domain CbiA PF01656.23 gi|568162887|ref|YP_008946176.1| - 0.0012 18.9 0.0 0.002 18.2 0.0 1.5 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_22 PF13401.6 gi|568162887|ref|YP_008946176.1| - 0.0012 19.1 0.1 0.0032 17.7 0.1 1.7 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|568162887|ref|YP_008946176.1| - 0.0021 17.8 0.0 0.0056 16.4 0.0 1.6 1 1 0 1 1 1 1 AAA domain DAP3 PF10236.9 gi|568162887|ref|YP_008946176.1| - 0.0024 17.1 0.0 0.04 13.1 0.0 2.0 2 0 0 2 2 2 1 Mitochondrial ribosomal death-associated protein 3 ATPase_2 PF01637.18 gi|568162887|ref|YP_008946176.1| - 0.0065 16.4 1.0 0.018 14.9 0.6 2.0 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea ABC_tran PF00005.27 gi|568162887|ref|YP_008946176.1| - 0.0065 17.0 0.3 0.012 16.1 0.0 1.6 2 0 0 2 2 1 1 ABC transporter NB-ARC PF00931.22 gi|568162887|ref|YP_008946176.1| - 0.0075 15.5 0.0 0.013 14.7 0.0 1.3 1 0 0 1 1 1 1 NB-ARC domain MobB PF03205.14 gi|568162887|ref|YP_008946176.1| - 0.0084 16.0 0.2 0.02 14.8 0.1 1.7 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_19 PF13245.6 gi|568162887|ref|YP_008946176.1| - 0.009 16.4 0.1 0.074 13.4 0.0 2.0 2 0 0 2 2 2 1 AAA domain Thymidylate_kin PF02223.17 gi|568162887|ref|YP_008946176.1| - 0.014 15.1 0.0 0.057 13.1 0.0 1.8 2 0 0 2 2 2 0 Thymidylate kinase DUF2478 PF10649.9 gi|568162887|ref|YP_008946176.1| - 0.018 14.6 0.0 0.047 13.3 0.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2478) RNA_helicase PF00910.22 gi|568162887|ref|YP_008946176.1| - 0.019 15.4 0.1 0.069 13.5 0.0 1.9 2 0 0 2 2 2 0 RNA helicase AAA_28 PF13521.6 gi|568162887|ref|YP_008946176.1| - 0.021 15.0 0.0 0.035 14.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|568162887|ref|YP_008946176.1| - 0.024 15.2 0.2 0.034 14.7 0.2 1.7 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.6 gi|568162887|ref|YP_008946176.1| - 0.026 14.6 0.6 0.99 9.5 0.6 2.2 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|568162887|ref|YP_008946176.1| - 0.032 14.4 0.0 0.72 10.0 0.0 2.2 2 1 0 2 2 2 0 AAA domain cobW PF02492.19 gi|568162887|ref|YP_008946176.1| - 0.033 13.8 0.0 0.068 12.8 0.0 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 gi|568162887|ref|YP_008946176.1| - 0.038 13.0 0.0 0.058 12.4 0.0 1.2 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB APS_kinase PF01583.20 gi|568162887|ref|YP_008946176.1| - 0.055 13.4 0.0 0.081 12.8 0.0 1.3 1 0 0 1 1 1 0 Adenylylsulphate kinase Ploopntkinase3 PF18751.1 gi|568162887|ref|YP_008946176.1| - 0.075 12.9 0.0 0.098 12.6 0.0 1.2 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 IstB_IS21 PF01695.17 gi|568162887|ref|YP_008946176.1| - 0.14 11.9 0.0 8.3 6.1 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein ATP_bind_1 PF03029.17 gi|568162887|ref|YP_008946176.1| - 0.16 11.8 0.0 0.7 9.6 0.0 1.8 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein Chlor_dismutase PF06778.12 gi|568162888|ref|YP_008946177.1| - 1.9e-47 161.4 0.1 4e-47 160.3 0.0 1.5 1 1 1 2 2 2 1 Chlorite dismutase Darcynin PF17074.5 gi|568162888|ref|YP_008946177.1| - 0.0025 18.0 0.1 0.014 15.6 0.0 1.9 2 0 0 2 2 2 1 Darcynin, domain of unknown function Aldedh PF00171.22 gi|568162888|ref|YP_008946177.1| - 0.1 11.1 0.2 1.7 7.0 0.3 2.0 2 0 0 2 2 2 0 Aldehyde dehydrogenase family NUDIX PF00293.28 gi|568162889|ref|YP_008946178.1| - 1.9e-14 53.9 0.0 2.6e-14 53.4 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain SNARE_assoc PF09335.11 gi|568162890|ref|YP_008946179.1| - 4.2e-06 27.2 3.0 4.2e-06 27.2 3.0 2.1 1 1 1 2 2 2 1 SNARE associated Golgi protein TMC PF07810.13 gi|568162890|ref|YP_008946179.1| - 0.032 14.8 0.7 0.11 13.1 0.2 2.0 2 0 0 2 2 2 0 TMC domain AP_endonuc_2 PF01261.24 gi|568162891|ref|YP_008946180.1| - 4.3e-26 91.7 0.0 5.6e-26 91.3 0.0 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel UvdE PF03851.14 gi|568162891|ref|YP_008946180.1| - 0.00027 20.3 0.0 0.00041 19.7 0.0 1.3 1 0 0 1 1 1 1 UV-endonuclease UvdE DUF3973 PF13119.6 gi|568162891|ref|YP_008946180.1| - 0.014 15.5 0.4 0.033 14.3 0.4 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3973) Hydrolase_3 PF08282.12 gi|568162892|ref|YP_008946181.1| - 1.2e-25 90.7 0.2 5.3e-17 62.4 0.1 2.0 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase S6PP PF05116.13 gi|568162892|ref|YP_008946181.1| - 4.8e-09 36.1 0.0 2.9e-06 27.0 0.0 2.2 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase Trehalose_PPase PF02358.16 gi|568162892|ref|YP_008946181.1| - 2.4e-06 26.9 0.0 0.034 13.3 0.0 2.1 2 0 0 2 2 2 2 Trehalose-phosphatase DUF4832 PF16116.5 gi|568162892|ref|YP_008946181.1| - 0.00043 20.2 0.0 0.00057 19.8 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4832) Hydrolase PF00702.26 gi|568162892|ref|YP_008946181.1| - 0.005 17.1 0.0 0.011 16.0 0.0 1.6 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|568162892|ref|YP_008946181.1| - 0.01 16.2 0.0 0.19 12.1 0.0 2.5 1 1 2 3 3 3 0 haloacid dehalogenase-like hydrolase DUF934 PF06073.12 gi|568162892|ref|YP_008946181.1| - 0.025 14.5 0.0 0.054 13.4 0.0 1.5 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF934) UPF0020 PF01170.18 gi|568162893|ref|YP_008946182.1| - 0.0004 20.1 0.0 0.00055 19.7 0.0 1.2 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 MTS PF05175.14 gi|568162893|ref|YP_008946182.1| - 0.0061 16.1 0.0 0.0087 15.6 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 gi|568162893|ref|YP_008946182.1| - 0.038 14.7 0.0 0.073 13.8 0.0 1.6 1 1 0 1 1 1 0 Methyltransferase domain HAD_2 PF13419.6 gi|568162894|ref|YP_008946183.1| - 1.9e-12 47.7 0.0 2.5e-12 47.3 0.0 1.3 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|568162894|ref|YP_008946183.1| - 3.6e-11 43.8 0.0 9.7e-11 42.4 0.0 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|568162894|ref|YP_008946183.1| - 3.8e-06 26.9 0.0 1.2e-05 25.3 0.0 1.7 2 0 0 2 2 2 1 HAD-hyrolase-like Hydrolase_6 PF13344.6 gi|568162894|ref|YP_008946183.1| - 0.094 12.8 0.0 0.33 11.1 0.0 1.9 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|568162894|ref|YP_008946183.1| - 0.096 13.1 0.0 0.14 12.5 0.0 1.5 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase Zn-ribbon_8 PF09723.10 gi|568162895|ref|YP_008946184.1| - 0.00012 22.1 1.5 0.00023 21.2 1.5 1.4 1 0 0 1 1 1 1 Zinc ribbon domain HypA PF01155.19 gi|568162895|ref|YP_008946184.1| - 0.0012 18.8 1.0 0.0018 18.3 1.0 1.3 1 1 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-C2HC5 PF06221.13 gi|568162895|ref|YP_008946184.1| - 0.0016 18.3 0.4 0.0026 17.7 0.4 1.3 1 0 0 1 1 1 1 Putative zinc finger motif, C2HC5-type NRDD PF13597.6 gi|568162895|ref|YP_008946184.1| - 0.0049 15.7 0.3 0.0055 15.5 0.3 1.1 1 0 0 1 1 1 1 Anaerobic ribonucleoside-triphosphate reductase Sigma70_r4 PF04545.16 gi|568162895|ref|YP_008946184.1| - 0.022 14.3 0.1 0.033 13.7 0.1 1.2 1 0 0 1 1 1 0 Sigma-70, region 4 TF_Zn_Ribbon PF08271.12 gi|568162895|ref|YP_008946184.1| - 0.024 14.1 3.9 0.53 9.8 1.0 2.3 2 0 0 2 2 2 0 TFIIB zinc-binding DUF1451 PF07295.11 gi|568162895|ref|YP_008946184.1| - 0.029 14.4 2.0 0.04 13.9 1.4 1.4 1 1 0 1 1 1 0 Zinc-ribbon containing domain z-alpha PF02295.17 gi|568162895|ref|YP_008946184.1| - 0.047 13.8 1.0 0.078 13.0 1.0 1.3 1 0 0 1 1 1 0 Adenosine deaminase z-alpha domain PhnA_Zn_Ribbon PF08274.12 gi|568162895|ref|YP_008946184.1| - 0.066 13.2 6.7 0.29 11.1 1.9 2.2 2 0 0 2 2 2 0 PhnA Zinc-Ribbon HTH_11 PF08279.12 gi|568162895|ref|YP_008946184.1| - 0.076 13.0 0.2 0.13 12.2 0.2 1.4 1 0 0 1 1 1 0 HTH domain HTH_5 PF01022.20 gi|568162895|ref|YP_008946184.1| - 0.081 12.8 0.1 0.16 11.9 0.1 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family FUR PF01475.19 gi|568162895|ref|YP_008946184.1| - 0.084 13.0 2.3 2.8 8.1 0.3 2.1 2 0 0 2 2 2 0 Ferric uptake regulator family DUF35_N PF12172.8 gi|568162895|ref|YP_008946184.1| - 0.24 11.3 0.7 20 5.1 0.0 2.1 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) UPF0547 PF10571.9 gi|568162895|ref|YP_008946184.1| - 0.26 11.4 7.1 1.3 9.1 0.2 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 HalOD2 PF18547.1 gi|568162895|ref|YP_008946184.1| - 0.31 11.0 1.2 18 5.3 0.0 2.1 2 0 0 2 2 2 0 Halobacterial output domain 2 TFIIS_C PF01096.18 gi|568162895|ref|YP_008946184.1| - 0.48 10.3 3.1 15 5.6 0.6 2.3 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) eIF-5_eIF-2B PF01873.17 gi|568162895|ref|YP_008946184.1| - 0.57 10.1 6.5 0.21 11.5 1.4 2.3 1 1 2 3 3 3 0 Domain found in IF2B/IF5 ADK_lid PF05191.14 gi|568162895|ref|YP_008946184.1| - 0.6 10.1 6.8 0.27 11.2 4.4 1.7 2 0 0 2 2 2 0 Adenylate kinase, active site lid zf-ribbon_3 PF13248.6 gi|568162895|ref|YP_008946184.1| - 0.73 9.3 7.3 3.4 7.2 0.6 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Rubredoxin_2 PF18073.1 gi|568162895|ref|YP_008946184.1| - 2.1 8.2 7.3 2.8 7.8 0.4 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain zf-H2C2_2 PF13465.6 gi|568162895|ref|YP_008946184.1| - 2.8 8.5 5.4 10 6.7 0.1 2.4 2 0 0 2 2 2 0 Zinc-finger double domain DUF4268 PF14088.6 gi|568162897|ref|YP_008946186.1| - 0.0038 17.1 2.3 0.0046 16.8 2.3 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4268) NadA PF02445.16 gi|568162898|ref|YP_008946187.1| - 1.1e-100 336.7 0.0 1.2e-100 336.5 0.0 1.0 1 0 0 1 1 1 1 Quinolinate synthetase A protein Aminotran_5 PF00266.19 gi|568162899|ref|YP_008946188.1| - 3.8e-42 144.6 0.0 7.1e-42 143.7 0.0 1.4 1 1 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|568162899|ref|YP_008946188.1| - 0.00043 18.9 0.1 0.00075 18.1 0.1 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 gi|568162899|ref|YP_008946188.1| - 0.047 12.9 0.3 1.9 7.6 0.1 2.1 2 0 0 2 2 2 0 Aminotransferase class I and II AMP-binding PF00501.28 gi|568162900|ref|YP_008946189.1| - 2.4e-67 227.4 0.0 3.1e-67 227.0 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|568162900|ref|YP_008946189.1| - 2.2e-18 67.0 0.2 4e-18 66.1 0.2 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain ACAS_N PF16177.5 gi|568162900|ref|YP_008946189.1| - 9.5e-15 54.3 3.6 1.9e-14 53.3 3.6 1.5 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus PIN_6 PF17146.4 gi|568162901|ref|YP_008946190.1| - 2.4e-17 63.2 0.7 3.5e-17 62.7 0.7 1.3 1 0 0 1 1 1 1 PIN domain of ribonuclease DUF5356 PF17309.2 gi|568162901|ref|YP_008946190.1| - 0.007 16.3 0.0 0.0089 16.0 0.0 1.3 1 1 0 1 1 1 1 Family of unknown function (DUF5356) NOB1_Zn_bind PF08772.11 gi|568162901|ref|YP_008946190.1| - 0.0071 16.5 3.0 0.016 15.4 3.0 1.6 1 0 0 1 1 1 1 Nin one binding (NOB1) Zn-ribbon like zinc_ribbon_2 PF13240.6 gi|568162901|ref|YP_008946190.1| - 0.056 13.2 3.5 0.085 12.6 3.5 1.3 1 0 0 1 1 1 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|568162901|ref|YP_008946190.1| - 0.13 12.4 3.9 0.4 10.8 3.9 1.8 1 1 0 1 1 1 0 Zinc ribbon domain Ribosomal_L44 PF00935.19 gi|568162901|ref|YP_008946190.1| - 0.28 11.7 4.5 0.62 10.6 4.4 1.6 1 1 0 1 1 1 0 Ribosomal protein L44 DUF4379 PF14311.6 gi|568162901|ref|YP_008946190.1| - 0.81 10.1 3.0 3 8.3 3.0 1.9 1 1 0 1 1 1 0 Probable Zinc-ribbon domain ADK_lid PF05191.14 gi|568162901|ref|YP_008946190.1| - 2.2 8.3 4.2 4.3 7.4 4.2 1.5 1 0 0 1 1 1 0 Adenylate kinase, active site lid Desulfoferrod_N PF06397.12 gi|568162901|ref|YP_008946190.1| - 8.6 6.1 10.4 3.4 7.4 2.6 2.3 1 1 1 2 2 2 0 Desulfoferrodoxin, N-terminal domain NAD_kinase PF01513.21 gi|568162902|ref|YP_008946191.1| - 5.6e-20 71.7 0.0 1.5e-19 70.3 0.0 1.6 1 1 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.24 gi|568162902|ref|YP_008946191.1| - 0.0022 17.6 0.1 0.0054 16.3 0.1 1.6 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain CAP_C PF08603.11 gi|568164726|ref|YP_008946192.1| - 0.08 12.6 0.9 0.52 9.9 0.9 1.9 1 1 0 1 1 1 0 Adenylate cyclase associated (CAP) C terminal NPL PF17800.1 gi|568164726|ref|YP_008946192.1| - 0.082 13.5 0.1 0.16 12.5 0.1 1.5 1 1 1 2 2 2 0 Nucleoplasmin-like domain Pyr_redox_2 PF07992.14 gi|568162903|ref|YP_008946193.1| - 1.3e-30 106.6 0.7 1.7e-30 106.3 0.7 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|568162903|ref|YP_008946193.1| - 2.8e-24 85.9 1.2 1.1e-20 74.2 0.1 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|568162903|ref|YP_008946193.1| - 1.2e-14 54.6 0.1 3.3e-11 43.6 0.0 2.5 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 gi|568162903|ref|YP_008946193.1| - 5.1e-10 39.0 0.1 1.2e-07 31.2 0.0 2.9 2 1 1 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) HI0933_like PF03486.14 gi|568162903|ref|YP_008946193.1| - 6.6e-07 28.4 0.2 0.00047 19.0 0.0 3.5 4 0 0 4 4 4 1 HI0933-like protein NAD_binding_8 PF13450.6 gi|568162903|ref|YP_008946193.1| - 1.1e-06 28.7 0.2 4.2e-05 23.7 0.2 2.4 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 gi|568162903|ref|YP_008946193.1| - 3.5e-05 23.2 1.9 0.011 15.0 0.1 2.8 3 0 0 3 3 3 2 Thi4 family DAO PF01266.24 gi|568162903|ref|YP_008946193.1| - 5.9e-05 22.8 2.5 0.036 13.6 0.3 3.8 2 1 1 4 4 4 1 FAD dependent oxidoreductase NAD_binding_7 PF13241.6 gi|568162903|ref|YP_008946193.1| - 0.00013 22.4 0.1 0.0033 17.8 0.1 2.4 2 0 0 2 2 2 1 Putative NAD(P)-binding FMO-like PF00743.19 gi|568162903|ref|YP_008946193.1| - 0.00041 18.9 0.2 0.0018 16.8 0.0 1.9 1 1 1 2 2 2 1 Flavin-binding monooxygenase-like FAD_oxidored PF12831.7 gi|568162903|ref|YP_008946193.1| - 0.00057 19.4 1.8 0.0034 16.8 0.0 2.6 2 1 1 3 3 3 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|568162903|ref|YP_008946193.1| - 0.032 13.5 0.4 5.6 6.1 0.0 2.9 2 1 1 3 3 3 0 FAD binding domain Spermine_synth PF01564.17 gi|568162903|ref|YP_008946193.1| - 0.036 13.5 0.2 0.27 10.6 0.1 2.1 2 0 0 2 2 2 0 Spermine/spermidine synthase domain DUF4367 PF14285.6 gi|568162903|ref|YP_008946193.1| - 0.044 14.2 0.3 0.21 12.0 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4367) DUF2103 PF09876.9 gi|568162903|ref|YP_008946193.1| - 0.058 13.4 0.2 0.17 11.9 0.0 1.8 2 0 0 2 2 1 0 Predicted metal-binding protein (DUF2103) FAD_binding_2 PF00890.24 gi|568162903|ref|YP_008946193.1| - 0.06 12.4 3.5 0.66 9.0 0.1 3.0 2 1 1 3 3 3 0 FAD binding domain NAD_binding_9 PF13454.6 gi|568162903|ref|YP_008946193.1| - 0.3 11.0 1.7 29 4.6 0.1 3.3 3 1 1 4 4 4 0 FAD-NAD(P)-binding Met_10 PF02475.16 gi|568162904|ref|YP_008946194.1| - 4e-31 108.3 0.3 5.8e-31 107.8 0.3 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_25 PF13649.6 gi|568162904|ref|YP_008946194.1| - 2.7e-07 31.2 0.0 5e-07 30.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|568162904|ref|YP_008946194.1| - 2.5e-06 27.1 0.0 3.7e-05 23.3 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_11 PF08241.12 gi|568162904|ref|YP_008946194.1| - 1.3e-05 25.8 0.0 2.8e-05 24.7 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|568162904|ref|YP_008946194.1| - 0.00065 19.1 0.0 0.00087 18.7 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Cons_hypoth95 PF03602.15 gi|568162904|ref|YP_008946194.1| - 0.0037 16.9 0.1 0.076 12.6 0.0 2.4 2 1 1 3 3 3 1 Conserved hypothetical protein 95 POTRA_1 PF08478.10 gi|568162904|ref|YP_008946194.1| - 0.024 14.9 0.1 0.059 13.7 0.1 1.7 1 0 0 1 1 1 0 POTRA domain, FtsQ-type Trm5_N PF18093.1 gi|568162904|ref|YP_008946194.1| - 0.033 14.1 4.6 0.11 12.5 2.3 2.7 2 1 0 2 2 2 0 tRNA methyltransferase 5 N-terminal domain Methyltransf_15 PF09445.10 gi|568162904|ref|YP_008946194.1| - 0.056 13.0 0.1 0.3 10.7 0.1 2.1 1 1 0 1 1 1 0 RNA cap guanine-N2 methyltransferase CRS1_YhbY PF01985.21 gi|568162905|ref|YP_008946195.1| - 1.3e-14 54.1 1.3 1.5e-14 53.9 1.3 1.1 1 0 0 1 1 1 1 CRS1 / YhbY (CRM) domain EMG1 PF03587.14 gi|568162906|ref|YP_008946196.1| - 6.7e-43 146.6 0.1 7.6e-43 146.4 0.1 1.0 1 0 0 1 1 1 1 EMG1/NEP1 methyltransferase RHH_5 PF07878.11 gi|568162907|ref|YP_008946197.1| - 0.02 14.8 0.0 0.053 13.4 0.0 1.7 1 0 0 1 1 1 0 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 RHH_1 PF01402.21 gi|568162907|ref|YP_008946197.1| - 0.19 11.7 0.1 0.19 11.7 0.1 2.0 3 0 0 3 3 3 0 Ribbon-helix-helix protein, copG family YppF PF14178.6 gi|568162907|ref|YP_008946197.1| - 0.2 11.6 1.1 18 5.3 0.1 3.0 3 0 0 3 3 3 0 YppF-like protein Cytomega_TRL10 PF06084.11 gi|568162908|ref|YP_008946198.1| - 0.28 11.2 0.3 0.28 11.2 0.3 1.0 1 0 0 1 1 1 0 Cytomegalovirus TRL10 protein LAMTOR PF15454.6 gi|568164727|ref|YP_008946199.1| - 0.066 13.8 0.1 0.22 12.2 0.1 1.9 1 0 0 1 1 1 0 Late endosomal/lysosomal adaptor and MAPK and MTOR activator VitK2_biosynth PF02621.14 gi|568162909|ref|YP_008946200.1| - 5.2e-64 216.3 0.0 5.8e-64 216.2 0.0 1.0 1 0 0 1 1 1 1 Menaquinone biosynthesis NTPase_I-T PF01931.18 gi|568162910|ref|YP_008946201.1| - 3.9e-47 160.1 0.0 4.4e-47 159.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF84 Thioredoxin PF00085.20 gi|568162912|ref|YP_008946203.1| - 1.2e-28 99.1 0.0 1.4e-28 98.9 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|568162912|ref|YP_008946203.1| - 2.5e-09 37.6 0.1 2.2e-07 31.3 0.1 2.1 1 1 0 1 1 1 1 Thioredoxin-like domain OST3_OST6 PF04756.13 gi|568162912|ref|YP_008946203.1| - 2.8e-06 26.9 0.1 4.5e-06 26.2 0.1 1.3 1 1 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_8 PF13905.6 gi|568162912|ref|YP_008946203.1| - 5.4e-06 26.6 0.1 0.073 13.4 0.0 2.2 1 1 1 2 2 2 2 Thioredoxin-like Redoxin PF08534.10 gi|568162912|ref|YP_008946203.1| - 1e-05 25.3 0.2 0.079 12.7 0.0 2.1 1 1 1 2 2 2 2 Redoxin Thioredoxin_9 PF14595.6 gi|568162912|ref|YP_008946203.1| - 0.00011 21.9 0.0 0.00013 21.7 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_3 PF13192.6 gi|568162912|ref|YP_008946203.1| - 0.00016 21.7 0.0 0.00022 21.2 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin domain Phosducin PF02114.16 gi|568162912|ref|YP_008946203.1| - 0.00031 19.8 0.0 0.00032 19.8 0.0 1.1 1 0 0 1 1 1 1 Phosducin HyaE PF07449.11 gi|568162912|ref|YP_008946203.1| - 0.00034 20.5 0.0 0.00047 20.1 0.0 1.4 1 1 0 1 1 1 1 Hydrogenase-1 expression protein HyaE AhpC-TSA PF00578.21 gi|568162912|ref|YP_008946203.1| - 0.00043 20.2 0.1 0.27 11.1 0.1 2.1 1 1 1 2 2 2 2 AhpC/TSA family Thioredoxin_6 PF13848.6 gi|568162912|ref|YP_008946203.1| - 0.011 15.7 0.0 0.016 15.1 0.0 1.3 1 1 0 1 1 1 0 Thioredoxin-like domain TraF PF13728.6 gi|568162912|ref|YP_008946203.1| - 0.013 15.4 0.0 0.013 15.3 0.0 1.2 1 0 0 1 1 1 0 F plasmid transfer operon protein Calsequestrin PF01216.17 gi|568162912|ref|YP_008946203.1| - 0.023 13.8 0.0 0.023 13.8 0.0 1.1 1 0 0 1 1 1 0 Calsequestrin DUF2456 PF10445.9 gi|568162912|ref|YP_008946203.1| - 0.045 13.8 0.0 0.07 13.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2456) DSBA PF01323.20 gi|568162912|ref|YP_008946203.1| - 0.16 11.7 0.4 0.79 9.5 0.0 1.9 1 1 1 2 2 2 0 DSBA-like thioredoxin domain tRNA_deacylase PF04414.12 gi|568162913|ref|YP_008946204.1| - 3.2e-54 183.6 0.0 3.7e-54 183.4 0.0 1.0 1 0 0 1 1 1 1 D-aminoacyl-tRNA deacylase DELLA PF12041.8 gi|568162913|ref|YP_008946204.1| - 0.18 11.7 0.0 0.53 10.2 0.0 1.8 2 0 0 2 2 2 0 Transcriptional regulator DELLA protein N terminal His_Phos_1 PF00300.22 gi|568162914|ref|YP_008946205.1| - 1.6e-34 119.3 0.0 1.9e-34 119.1 0.0 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) DUF1435 PF07256.12 gi|568162914|ref|YP_008946205.1| - 0.0031 17.6 0.0 0.0058 16.7 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1435) REC1 PF18501.1 gi|568162914|ref|YP_008946205.1| - 0.0057 16.6 0.3 0.0082 16.1 0.3 1.1 1 0 0 1 1 1 1 Alpha helical recognition lobe domain AAA_24 PF13479.6 gi|568162914|ref|YP_008946205.1| - 0.023 14.4 0.1 0.063 13.0 0.0 1.6 2 0 0 2 2 2 0 AAA domain CBS PF00571.28 gi|568162915|ref|YP_008946206.1| - 2.8e-26 91.7 1.2 5.6e-12 45.9 0.2 2.2 2 0 0 2 2 2 2 CBS domain DUF1840 PF08895.11 gi|568162915|ref|YP_008946206.1| - 0.0077 16.6 0.0 2.9 8.2 0.0 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF1840) DisA_N PF02457.16 gi|568162915|ref|YP_008946206.1| - 0.04 13.5 0.2 0.066 12.8 0.2 1.5 1 1 0 1 1 1 0 DisA bacterial checkpoint controller nucleotide-binding AAA_13 PF13166.6 gi|568162917|ref|YP_008946208.1| - 0.00028 19.7 22.6 0.00028 19.7 22.6 3.4 1 1 1 3 3 3 1 AAA domain AAA_23 PF13476.6 gi|568162917|ref|YP_008946208.1| - 0.00086 19.9 31.5 0.00086 19.9 31.5 4.3 1 1 2 3 3 2 1 AAA domain FdhE PF04216.12 gi|568162917|ref|YP_008946208.1| - 0.0011 18.9 0.7 0.0011 18.9 0.7 2.2 2 0 0 2 2 2 1 Protein involved in formate dehydrogenase formation SbcCD_C PF13558.6 gi|568162917|ref|YP_008946208.1| - 0.0056 16.9 0.0 0.051 13.8 0.0 2.4 2 0 0 2 2 2 1 Putative exonuclease SbcCD, C subunit Mod_r PF07200.13 gi|568162917|ref|YP_008946208.1| - 0.0091 16.1 16.6 0.0091 16.1 16.6 4.5 2 2 2 4 4 4 2 Modifier of rudimentary (Mod(r)) protein SMC_N PF02463.19 gi|568162917|ref|YP_008946208.1| - 0.011 15.2 20.7 0.056 12.9 19.1 2.8 2 1 0 2 2 2 0 RecF/RecN/SMC N terminal domain ABC_tran_CTD PF16326.5 gi|568162917|ref|YP_008946208.1| - 0.012 15.8 56.0 0.14 12.4 9.4 6.8 2 2 6 8 8 8 0 ABC transporter C-terminal domain DUF4407 PF14362.6 gi|568162917|ref|YP_008946208.1| - 0.024 14.0 33.1 0.23 10.8 11.5 3.4 1 1 2 3 3 3 0 Domain of unknown function (DUF4407) DNA_ligase_ZBD PF03119.16 gi|568162917|ref|YP_008946208.1| - 0.049 13.7 0.2 0.13 12.4 0.2 1.7 1 0 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain Spc7 PF08317.11 gi|568162917|ref|YP_008946208.1| - 0.063 12.2 59.7 0.049 12.5 21.9 3.3 2 1 1 3 3 3 0 Spc7 kinetochore protein GAS PF13851.6 gi|568162917|ref|YP_008946208.1| - 0.065 12.6 60.0 1.7 8.0 7.8 4.1 1 1 1 3 3 3 0 Growth-arrest specific micro-tubule binding T3SSipB PF16535.5 gi|568162917|ref|YP_008946208.1| - 0.2 12.1 17.6 1.2 9.6 6.2 3.5 2 1 1 3 3 3 0 Type III cell invasion protein SipB Prominin PF05478.11 gi|568162917|ref|YP_008946208.1| - 0.23 9.4 34.5 0.033 12.2 13.7 2.3 2 0 0 2 2 2 0 Prominin Baculo_PEP_C PF04513.12 gi|568162917|ref|YP_008946208.1| - 0.49 10.4 36.1 0.42 10.7 6.6 4.8 1 1 4 5 5 5 0 Baculovirus polyhedron envelope protein, PEP, C terminus BLOC1_2 PF10046.9 gi|568162917|ref|YP_008946208.1| - 0.61 10.4 49.8 2.8 8.3 4.4 5.4 2 2 1 4 4 4 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF948 PF06103.11 gi|568162917|ref|YP_008946208.1| - 1 9.7 34.5 8.5 6.7 0.4 6.1 3 2 3 6 6 6 0 Bacterial protein of unknown function (DUF948) Serine_rich PF08824.10 gi|568162917|ref|YP_008946208.1| - 1.5 8.8 19.4 0.085 12.8 6.5 3.4 2 1 0 3 3 3 0 Serine rich protein interaction domain NPV_P10 PF05531.12 gi|568162917|ref|YP_008946208.1| - 2 9.0 36.1 7.1 7.2 1.0 6.2 3 2 3 6 6 6 0 Nucleopolyhedrovirus P10 protein HTH_57 PF18679.1 gi|568162917|ref|YP_008946208.1| - 6 7.2 17.0 3.8 7.9 3.8 4.4 4 2 1 5 5 5 0 ThcOx helix turn helix domain TMPIT PF07851.13 gi|568162917|ref|YP_008946208.1| - 7.1 5.8 45.5 0.076 12.3 5.9 4.3 1 1 4 5 5 5 0 TMPIT-like protein DUF3584 PF12128.8 gi|568162917|ref|YP_008946208.1| - 8.3 3.8 47.2 4.1 4.8 22.8 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3584) IU_nuc_hydro PF01156.19 gi|568162918|ref|YP_008946209.1| - 1.4e-73 248.2 0.0 1.6e-73 248.0 0.0 1.0 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase FUR PF01475.19 gi|568162919|ref|YP_008946210.1| - 3.4e-21 75.6 0.1 4.1e-21 75.4 0.1 1.1 1 0 0 1 1 1 1 Ferric uptake regulator family HTH_20 PF12840.7 gi|568162919|ref|YP_008946210.1| - 0.001 19.1 0.0 0.0017 18.4 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain PadR PF03551.14 gi|568162919|ref|YP_008946210.1| - 0.0028 17.6 0.1 0.0047 16.9 0.1 1.4 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family Penicillinase_R PF03965.16 gi|568162919|ref|YP_008946210.1| - 0.0031 17.9 0.0 0.0097 16.3 0.0 1.8 1 1 1 2 2 2 1 Penicillinase repressor HTH_5 PF01022.20 gi|568162919|ref|YP_008946210.1| - 0.0046 16.8 0.0 0.09 12.7 0.0 2.4 1 1 0 1 1 1 1 Bacterial regulatory protein, arsR family HxlR PF01638.17 gi|568162919|ref|YP_008946210.1| - 0.01 15.7 0.0 0.014 15.2 0.0 1.4 1 0 0 1 1 1 0 HxlR-like helix-turn-helix TrmB PF01978.19 gi|568162919|ref|YP_008946210.1| - 0.03 14.2 0.0 0.12 12.2 0.0 2.0 2 1 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.12 gi|568162919|ref|YP_008946210.1| - 0.05 13.6 0.1 0.22 11.5 0.0 2.2 2 1 0 2 2 2 0 HTH domain HTH_Tnp_Tc3_2 PF01498.18 gi|568162919|ref|YP_008946210.1| - 0.14 12.4 0.1 6 7.2 0.0 2.2 1 1 1 2 2 2 0 Transposase HTH_32 PF13565.6 gi|568162919|ref|YP_008946210.1| - 0.21 12.2 0.0 0.39 11.4 0.0 1.5 1 1 0 1 1 1 0 Homeodomain-like domain RGS-like PF09128.11 gi|568162920|ref|YP_008946211.1| - 0.017 14.8 0.0 0.024 14.3 0.0 1.3 1 0 0 1 1 1 0 Regulator of G protein signalling-like domain NurA PF09376.10 gi|568164728|ref|YP_008946212.1| - 4.3e-37 128.1 5.0 5.2e-37 127.8 5.0 1.1 1 0 0 1 1 1 1 NurA domain MetOD1 PF18546.1 gi|568164728|ref|YP_008946212.1| - 0.014 15.3 0.1 0.026 14.5 0.1 1.4 1 0 0 1 1 1 0 Metanogen output domain 1 Phage-Gp8 PF09215.10 gi|568164728|ref|YP_008946212.1| - 0.18 10.8 0.0 0.27 10.3 0.0 1.1 1 0 0 1 1 1 0 Bacteriophage T4, Gp8 AAA_23 PF13476.6 gi|568162921|ref|YP_008946213.1| - 3.3e-19 70.2 19.3 3.3e-19 70.2 19.3 7.0 1 1 4 5 5 2 1 AAA domain AAA_15 PF13175.6 gi|568162921|ref|YP_008946213.1| - 1.2e-16 61.4 25.0 1.2e-16 61.4 25.0 3.5 1 1 1 2 2 1 1 AAA ATPase domain Rad50_zn_hook PF04423.14 gi|568162921|ref|YP_008946213.1| - 6.5e-12 45.1 2.1 6.5e-12 45.1 2.1 10.7 14 3 1 15 15 12 1 Rad50 zinc hook motif SMC_N PF02463.19 gi|568162921|ref|YP_008946213.1| - 4.1e-11 42.7 2.3 4.1e-11 42.7 2.3 4.1 2 1 0 2 2 1 1 RecF/RecN/SMC N terminal domain AAA_13 PF13166.6 gi|568162921|ref|YP_008946213.1| - 7.7e-07 28.2 105.3 0.0016 17.2 24.1 5.3 2 1 2 4 4 4 3 AAA domain AAA_29 PF13555.6 gi|568162921|ref|YP_008946213.1| - 1.6e-05 24.5 0.0 3.3e-05 23.5 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain SbcCD_C PF13558.6 gi|568162921|ref|YP_008946213.1| - 6e-05 23.2 0.0 0.00016 21.9 0.0 1.7 1 0 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_21 PF13304.6 gi|568162921|ref|YP_008946213.1| - 9.7e-05 22.3 2.1 9.7e-05 22.3 2.1 4.4 3 2 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran PF00005.27 gi|568162921|ref|YP_008946213.1| - 0.00016 22.2 2.3 0.00016 22.2 2.3 5.4 1 1 0 2 2 1 1 ABC transporter RsgA_GTPase PF03193.16 gi|568162921|ref|YP_008946213.1| - 0.0018 18.2 0.1 0.0018 18.2 0.1 4.6 3 1 2 5 5 5 1 RsgA GTPase ADIP PF11559.8 gi|568162921|ref|YP_008946213.1| - 0.0062 16.6 7.5 0.0062 16.6 7.5 7.7 3 2 4 8 8 7 1 Afadin- and alpha -actinin-Binding NPV_P10 PF05531.12 gi|568162921|ref|YP_008946213.1| - 0.061 13.8 58.5 0.25 11.9 1.1 9.3 4 2 3 8 8 8 0 Nucleopolyhedrovirus P10 protein DUF4407 PF14362.6 gi|568162921|ref|YP_008946213.1| - 0.077 12.3 56.1 0.74 9.1 5.9 4.3 1 1 4 5 5 5 0 Domain of unknown function (DUF4407) GAS PF13851.6 gi|568162921|ref|YP_008946213.1| - 0.16 11.3 125.0 0.17 11.2 16.3 6.3 1 1 5 6 6 6 0 Growth-arrest specific micro-tubule binding DUF5342 PF17277.2 gi|568162921|ref|YP_008946213.1| - 0.18 12.2 2.4 0.34 11.3 0.3 2.7 2 0 0 2 2 2 0 Family of unknown function (DUF5342) Seryl_tRNA_N PF02403.22 gi|568162921|ref|YP_008946213.1| - 1.1 9.5 112.0 0.057 13.7 7.9 8.7 2 2 6 8 8 8 0 Seryl-tRNA synthetase N-terminal domain WXG100 PF06013.12 gi|568162921|ref|YP_008946213.1| - 4.3 7.6 14.3 85 3.5 0.0 7.1 5 2 1 7 7 7 0 Proteins of 100 residues with WXG Occludin_ELL PF07303.13 gi|568162921|ref|YP_008946213.1| - 9.5 7.0 87.3 0.67 10.7 3.7 8.5 2 2 7 9 9 9 0 Occludin homology domain Metallophos PF00149.28 gi|568162922|ref|YP_008946214.1| - 6.6e-14 52.9 0.4 1.1e-13 52.1 0.4 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|568162922|ref|YP_008946214.1| - 7.1e-11 42.6 0.0 1.6e-10 41.4 0.0 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain DUF87 PF01935.17 gi|568162923|ref|YP_008946215.1| - 1.4e-48 165.9 3.5 2.1e-48 165.4 3.5 1.3 1 0 0 1 1 1 1 Helicase HerA, central domain HAS-barrel PF09378.10 gi|568162923|ref|YP_008946215.1| - 9.9e-13 48.1 1.4 2.6e-12 46.7 0.0 2.5 3 0 0 3 3 3 1 HAS barrel domain DUF853 PF05872.12 gi|568162923|ref|YP_008946215.1| - 3.2e-12 45.8 0.0 1.3e-06 27.4 0.0 2.3 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) FtsK_SpoIIIE PF01580.18 gi|568162923|ref|YP_008946215.1| - 0.00025 20.5 0.1 0.015 14.7 0.0 2.4 2 1 1 3 3 3 1 FtsK/SpoIIIE family TrwB_AAD_bind PF10412.9 gi|568162923|ref|YP_008946215.1| - 0.00033 19.7 0.0 0.0019 17.2 0.0 2.0 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain Dynamin_M PF01031.20 gi|568162923|ref|YP_008946215.1| - 0.0047 16.2 0.6 0.0079 15.4 0.6 1.3 1 0 0 1 1 1 1 Dynamin central region AAA_10 PF12846.7 gi|568162923|ref|YP_008946215.1| - 0.0047 15.9 0.2 0.5 9.2 0.2 2.3 2 1 0 2 2 2 1 AAA-like domain DHC_N1 PF08385.12 gi|568162923|ref|YP_008946215.1| - 0.0048 15.6 1.0 0.0075 15.0 1.0 1.3 1 0 0 1 1 1 1 Dynein heavy chain, N-terminal region 1 IF2_N PF04760.15 gi|568162923|ref|YP_008946215.1| - 0.0072 16.1 0.2 0.14 12.0 0.1 2.6 2 0 0 2 2 2 1 Translation initiation factor IF-2, N-terminal region ResIII PF04851.15 gi|568162923|ref|YP_008946215.1| - 0.053 13.5 1.1 2.3 8.2 1.1 2.7 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|568162923|ref|YP_008946215.1| - 0.088 12.6 0.8 14 5.4 0.1 2.6 1 1 1 2 2 2 0 DEAD/DEAH box helicase DUF1848 PF08902.11 gi|568162923|ref|YP_008946215.1| - 0.091 12.5 0.2 0.16 11.7 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1848) ABC_tran PF00005.27 gi|568162923|ref|YP_008946215.1| - 0.11 13.0 1.4 0.24 11.9 1.3 1.6 1 1 0 1 1 1 0 ABC transporter Phyto-Amp PF15438.6 gi|568162924|ref|YP_008946216.1| - 0.00059 19.7 2.4 0.19 11.5 0.3 2.1 1 1 0 2 2 2 2 Antigenic membrane protein of phytoplasma Rubrerythrin PF02915.17 gi|568162924|ref|YP_008946216.1| - 0.0006 20.2 8.7 0.64 10.4 8.6 2.2 1 1 0 1 1 1 1 Rubrerythrin Big_2 PF02368.18 gi|568162924|ref|YP_008946216.1| - 0.0018 18.1 0.0 2.6 8.0 0.0 2.5 2 1 0 2 2 2 2 Bacterial Ig-like domain (group 2) DUF892 PF05974.12 gi|568162924|ref|YP_008946216.1| - 0.0024 17.9 8.7 0.089 12.8 1.2 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF892) Ferritin PF00210.24 gi|568162924|ref|YP_008946216.1| - 0.011 15.6 4.5 0.62 10.0 0.5 2.1 1 1 0 2 2 2 0 Ferritin-like domain TRCF PF03461.15 gi|568162924|ref|YP_008946216.1| - 0.029 14.7 0.6 10 6.6 0.1 2.2 1 1 0 2 2 2 0 TRCF domain DUF2024 PF09630.10 gi|568162924|ref|YP_008946216.1| - 0.092 12.6 1.4 9.7 6.1 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF2024) NCD1 PF04904.13 gi|568162924|ref|YP_008946216.1| - 0.13 12.2 0.0 2.5 8.2 0.0 2.3 1 1 1 2 2 2 0 NAB conserved region 1 (NCD1) MOR2-PAG1_C PF14225.6 gi|568162924|ref|YP_008946216.1| - 0.14 12.0 1.8 10 5.9 0.1 2.0 1 1 1 2 2 2 0 Cell morphogenesis C-terminal Pterin_4a PF01329.19 gi|568162924|ref|YP_008946216.1| - 0.15 12.3 0.8 13 6.0 0.1 2.4 1 1 1 2 2 2 0 Pterin 4 alpha carbinolamine dehydratase Ferritin PF00210.24 gi|568162925|ref|YP_008946217.1| - 0.036 14.0 2.7 0.82 9.6 0.5 2.4 1 1 0 2 2 2 0 Ferritin-like domain FTR1 PF03239.14 gi|568162925|ref|YP_008946217.1| - 0.069 12.3 0.0 0.077 12.2 0.0 1.1 1 0 0 1 1 1 0 Iron permease FTR1 family FliL PF03748.14 gi|568162925|ref|YP_008946217.1| - 0.26 11.9 5.0 1.2 9.7 5.0 2.1 1 1 0 1 1 1 0 Flagellar basal body-associated protein FliL Carb_kinase PF01256.17 gi|568162926|ref|YP_008946218.1| - 1.7e-54 184.9 0.1 2.3e-54 184.5 0.1 1.2 1 0 0 1 1 1 1 Carbohydrate kinase YjeF_N PF03853.15 gi|568162926|ref|YP_008946218.1| - 1.4e-38 132.4 0.0 2.3e-38 131.8 0.0 1.4 1 0 0 1 1 1 1 YjeF-related protein N-terminus HK PF02110.15 gi|568162926|ref|YP_008946218.1| - 1.4e-07 31.1 0.1 3.7e-07 29.8 0.1 1.7 1 1 0 1 1 1 1 Hydroxyethylthiazole kinase family Phos_pyr_kin PF08543.12 gi|568162926|ref|YP_008946218.1| - 0.00035 20.0 0.0 0.00062 19.2 0.0 1.3 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase KR PF08659.10 gi|568162926|ref|YP_008946218.1| - 0.025 14.5 0.0 0.048 13.6 0.0 1.4 1 0 0 1 1 1 0 KR domain PBECR3 PF18812.1 gi|568162926|ref|YP_008946218.1| - 0.055 13.4 1.1 7.7 6.5 0.1 3.5 3 0 0 3 3 3 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3 AhpC-TSA PF00578.21 gi|568162927|ref|YP_008946219.1| - 8.7e-39 132.3 0.1 1e-38 132.0 0.1 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|568162927|ref|YP_008946219.1| - 9.4e-27 93.5 0.0 1.1e-26 93.3 0.0 1.0 1 0 0 1 1 1 1 Redoxin Thioredoxin_8 PF13905.6 gi|568162927|ref|YP_008946219.1| - 2.5e-05 24.5 0.0 3.5e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like AhpC-TSA_2 PF13911.6 gi|568162927|ref|YP_008946219.1| - 0.0044 17.1 0.0 0.0061 16.7 0.0 1.3 1 0 0 1 1 1 1 AhpC/TSA antioxidant enzyme DUF899 PF05988.12 gi|568162927|ref|YP_008946219.1| - 0.035 13.6 0.0 0.039 13.5 0.0 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF899) Costars PF14705.6 gi|568162927|ref|YP_008946219.1| - 0.092 12.9 0.1 1 9.6 0.0 2.1 2 0 0 2 2 2 0 Costars PEPcase_2 PF14010.6 gi|568162928|ref|YP_008946220.1| - 2.3e-214 712.5 1.0 2.6e-214 712.3 1.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxylase DCD PF06559.11 gi|568162929|ref|YP_008946221.1| - 0.088 11.6 0.0 0.13 11.1 0.0 1.1 1 0 0 1 1 1 0 2'-deoxycytidine 5'-triphosphate deaminase (DCD) MeaB PF03308.16 gi|568162930|ref|YP_008946222.1| - 3.8e-86 288.4 0.2 4.8e-86 288.0 0.2 1.0 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB cobW PF02492.19 gi|568162930|ref|YP_008946222.1| - 1e-07 31.7 0.6 9e-07 28.6 0.6 2.3 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain DUF87 PF01935.17 gi|568162930|ref|YP_008946222.1| - 1.4e-05 25.3 0.9 0.00015 21.9 0.1 2.1 2 0 0 2 2 2 1 Helicase HerA, central domain AAA_22 PF13401.6 gi|568162930|ref|YP_008946222.1| - 4.1e-05 23.9 0.0 9.6e-05 22.7 0.0 1.6 1 0 0 1 1 1 1 AAA domain MobB PF03205.14 gi|568162930|ref|YP_008946222.1| - 6.3e-05 22.9 0.0 0.00013 21.8 0.0 1.5 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B SRP54 PF00448.22 gi|568162930|ref|YP_008946222.1| - 0.00027 20.6 0.0 0.052 13.2 0.0 2.2 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain NTPase_1 PF03266.15 gi|568162930|ref|YP_008946222.1| - 0.00029 20.8 0.1 0.00079 19.4 0.1 1.7 1 0 0 1 1 1 1 NTPase GTP_EFTU PF00009.27 gi|568162930|ref|YP_008946222.1| - 0.00046 19.8 0.0 0.26 10.8 0.0 2.3 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain NB-ARC PF00931.22 gi|568162930|ref|YP_008946222.1| - 0.00049 19.4 0.1 0.0011 18.2 0.0 1.6 2 0 0 2 2 2 1 NB-ARC domain RsgA_GTPase PF03193.16 gi|568162930|ref|YP_008946222.1| - 0.0005 20.0 0.1 0.0081 16.1 0.1 2.3 2 0 0 2 2 2 1 RsgA GTPase AAA_16 PF13191.6 gi|568162930|ref|YP_008946222.1| - 0.00087 19.7 0.1 0.0023 18.3 0.0 1.7 2 0 0 2 2 2 1 AAA ATPase domain KAP_NTPase PF07693.14 gi|568162930|ref|YP_008946222.1| - 0.001 18.4 0.0 0.0025 17.1 0.0 1.3 1 1 0 1 1 1 1 KAP family P-loop domain ATP_bind_1 PF03029.17 gi|568162930|ref|YP_008946222.1| - 0.0011 18.8 0.0 0.0042 16.9 0.0 1.8 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein TrwB_AAD_bind PF10412.9 gi|568162930|ref|YP_008946222.1| - 0.0011 17.9 0.0 0.0019 17.2 0.0 1.3 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain AAA_18 PF13238.6 gi|568162930|ref|YP_008946222.1| - 0.0022 18.6 0.3 0.0063 17.1 0.1 1.9 2 0 0 2 2 2 1 AAA domain ABC_tran PF00005.27 gi|568162930|ref|YP_008946222.1| - 0.0023 18.4 0.0 0.0048 17.4 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_30 PF13604.6 gi|568162930|ref|YP_008946222.1| - 0.0024 17.6 0.0 0.004 16.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 gi|568162930|ref|YP_008946222.1| - 0.005 17.2 0.1 0.025 14.9 0.0 2.0 2 0 0 2 2 2 1 AAA domain FtsK_SpoIIIE PF01580.18 gi|568162930|ref|YP_008946222.1| - 0.0052 16.2 0.0 0.0092 15.4 0.0 1.3 1 0 0 1 1 1 1 FtsK/SpoIIIE family ATPase_2 PF01637.18 gi|568162930|ref|YP_008946222.1| - 0.0065 16.4 0.4 0.024 14.6 0.0 1.9 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea CbiA PF01656.23 gi|568162930|ref|YP_008946222.1| - 0.0078 16.3 0.0 0.013 15.6 0.0 1.5 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Zeta_toxin PF06414.12 gi|568162930|ref|YP_008946222.1| - 0.0078 15.5 0.0 0.015 14.6 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin Viral_helicase1 PF01443.18 gi|568162930|ref|YP_008946222.1| - 0.01 15.6 0.1 0.019 14.7 0.1 1.4 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_29 PF13555.6 gi|568162930|ref|YP_008946222.1| - 0.011 15.4 0.3 0.031 14.0 0.3 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_17 PF13207.6 gi|568162930|ref|YP_008946222.1| - 0.016 15.6 0.0 0.039 14.4 0.0 1.7 1 0 0 1 1 1 0 AAA domain MipZ PF09140.11 gi|568162930|ref|YP_008946222.1| - 0.021 14.1 0.0 0.043 13.1 0.0 1.5 1 0 0 1 1 1 0 ATPase MipZ DUF815 PF05673.13 gi|568162930|ref|YP_008946222.1| - 0.022 13.9 0.0 0.04 13.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF815) MMR_HSR1 PF01926.23 gi|568162930|ref|YP_008946222.1| - 0.022 14.8 0.2 0.022 14.8 0.2 1.9 2 1 0 2 2 2 0 50S ribosome-binding GTPase AAA_25 PF13481.6 gi|568162930|ref|YP_008946222.1| - 0.027 14.1 0.0 0.048 13.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|568162930|ref|YP_008946222.1| - 0.036 14.3 0.1 0.074 13.3 0.1 1.5 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|568162930|ref|YP_008946222.1| - 0.038 13.9 0.0 0.083 12.8 0.0 1.5 1 0 0 1 1 1 0 NACHT domain DUF2075 PF09848.9 gi|568162930|ref|YP_008946222.1| - 0.038 13.2 0.0 0.065 12.5 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) PRK PF00485.18 gi|568162930|ref|YP_008946222.1| - 0.041 13.6 0.1 0.077 12.7 0.1 1.4 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family Ploopntkinase3 PF18751.1 gi|568162930|ref|YP_008946222.1| - 0.048 13.6 0.0 0.091 12.7 0.0 1.4 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 Adeno_IVa2 PF02456.15 gi|568162930|ref|YP_008946222.1| - 0.067 12.0 0.1 0.1 11.4 0.1 1.2 1 0 0 1 1 1 0 Adenovirus IVa2 protein T2SSE PF00437.20 gi|568162930|ref|YP_008946222.1| - 0.069 12.2 0.5 0.18 10.9 0.1 1.8 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_14 PF13173.6 gi|568162930|ref|YP_008946222.1| - 0.076 13.0 0.0 0.18 11.8 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|568162930|ref|YP_008946222.1| - 0.12 12.6 0.1 0.21 11.7 0.1 1.4 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|568162930|ref|YP_008946222.1| - 0.19 12.1 0.0 0.38 11.2 0.0 1.5 1 0 0 1 1 1 0 RNA helicase B12-binding PF02310.19 gi|568162931|ref|YP_008946223.1| - 7e-23 80.9 0.5 8.7e-23 80.7 0.5 1.1 1 0 0 1 1 1 1 B12 binding domain IMPDH PF00478.25 gi|568162931|ref|YP_008946223.1| - 0.00072 18.6 0.2 0.00088 18.4 0.2 1.1 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain TPP_enzyme_N PF02776.18 gi|568162931|ref|YP_008946223.1| - 0.024 14.3 0.0 2 8.0 0.0 2.1 2 0 0 2 2 2 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain QRPTase_C PF01729.19 gi|568162931|ref|YP_008946223.1| - 0.046 13.5 0.1 0.055 13.2 0.1 1.2 1 0 0 1 1 1 0 Quinolinate phosphoribosyl transferase, C-terminal domain Nitro_FeMo-Co PF02579.17 gi|568162931|ref|YP_008946223.1| - 0.1 13.0 0.7 13 6.2 0.2 2.6 2 1 1 3 3 3 0 Dinitrogenase iron-molybdenum cofactor 7kD_DNA_binding PF02294.18 gi|568162932|ref|YP_008946224.1| - 6e-41 138.3 4.2 6.8e-41 138.1 4.2 1.0 1 0 0 1 1 1 1 7kD DNA-binding domain HTH_38 PF13936.6 gi|568164729|ref|YP_008946225.1| - 0.0041 16.8 0.0 0.0069 16.1 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Trp_repressor PF01371.19 gi|568164729|ref|YP_008946225.1| - 0.0044 17.1 0.0 0.006 16.7 0.0 1.2 1 0 0 1 1 1 1 Trp repressor protein Sigma70_r4_2 PF08281.12 gi|568164729|ref|YP_008946225.1| - 0.0067 16.1 0.0 0.013 15.1 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 gi|568164729|ref|YP_008946225.1| - 0.0092 15.5 0.0 0.015 14.8 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_3 PF01381.22 gi|568164729|ref|YP_008946225.1| - 0.0099 15.9 0.1 0.016 15.3 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_23 PF13384.6 gi|568164729|ref|YP_008946225.1| - 0.016 15.0 0.0 0.031 14.1 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain Terminase_5 PF06056.12 gi|568164729|ref|YP_008946225.1| - 0.018 15.0 0.1 0.03 14.2 0.1 1.4 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) GerE PF00196.19 gi|568164729|ref|YP_008946225.1| - 0.066 12.8 0.0 0.12 11.9 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family DUF357 PF04010.13 gi|568164729|ref|YP_008946225.1| - 0.086 12.9 0.0 0.15 12.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF357) HTH_28 PF13518.6 gi|568164729|ref|YP_008946225.1| - 0.11 12.6 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain tRNA-synt_2 PF00152.20 gi|568162933|ref|YP_008946226.1| - 2.2e-80 270.1 0.2 2.8e-80 269.7 0.2 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 gi|568162933|ref|YP_008946226.1| - 4.4e-11 42.6 0.2 8.6e-11 41.7 0.2 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 gi|568162933|ref|YP_008946226.1| - 7.9e-09 35.3 0.6 8.1e-06 25.5 0.1 3.1 3 0 0 3 3 3 2 tRNA synthetases class II core domain (F) HHA PF05321.11 gi|568162933|ref|YP_008946226.1| - 0.093 13.1 0.2 0.67 10.3 0.1 2.3 2 0 0 2 2 2 0 Haemolysin expression modulating protein Med2 PF11214.8 gi|568162933|ref|YP_008946226.1| - 0.11 12.6 0.1 0.32 11.2 0.1 1.7 1 0 0 1 1 1 0 Mediator complex subunit 2 SAP PF02037.27 gi|568162933|ref|YP_008946226.1| - 0.13 12.0 1.0 0.45 10.3 0.0 2.5 3 0 0 3 3 3 0 SAP domain Peptidase_M50 PF02163.22 gi|568162934|ref|YP_008946227.1| - 1.4e-21 76.9 4.2 1.4e-21 76.9 4.2 1.6 2 0 0 2 2 2 1 Peptidase family M50 NTP_transf_2 PF01909.23 gi|568162935|ref|YP_008946228.1| - 4.7e-07 30.0 0.2 8.7e-07 29.1 0.2 1.8 1 1 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|568162935|ref|YP_008946228.1| - 2.5e-05 24.3 0.0 6.4e-05 23.0 0.0 1.9 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase DUF1122 PF06557.11 gi|568162936|ref|YP_008946229.1| - 8.1e-64 214.3 0.4 1e-63 214.0 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1122) Radical_SAM PF04055.21 gi|568162937|ref|YP_008946230.1| - 2.2e-10 41.2 0.1 6.3e-08 33.2 0.0 2.5 1 1 1 2 2 2 2 Radical SAM superfamily Fer4_14 PF13394.6 gi|568162937|ref|YP_008946230.1| - 3.3e-08 33.7 0.0 5.8e-08 32.9 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|568162937|ref|YP_008946230.1| - 4.9e-06 26.8 0.0 9.1e-06 26.0 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain eRF1_1 PF03463.15 gi|568162938|ref|YP_008946231.1| - 5.1e-24 84.7 1.7 6.4e-24 84.4 0.7 1.6 2 0 0 2 2 2 1 eRF1 domain 1 eRF1_3 PF03465.15 gi|568162938|ref|YP_008946231.1| - 9.1e-21 74.5 6.2 4.1e-20 72.3 0.3 2.8 2 1 0 2 2 2 1 eRF1 domain 3 eRF1_2 PF03464.15 gi|568162938|ref|YP_008946231.1| - 3.3e-06 27.4 0.5 2.1e-05 24.9 0.2 2.3 2 1 0 2 2 2 1 eRF1 domain 2 baeRF_family2 PF18844.1 gi|568162938|ref|YP_008946231.1| - 0.0028 17.7 0.0 0.0041 17.2 0.0 1.2 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 2 MobL PF18555.1 gi|568162938|ref|YP_008946231.1| - 0.0097 15.2 1.1 0.016 14.5 1.1 1.3 1 0 0 1 1 1 1 MobL relaxases Maelstrom PF13017.6 gi|568162938|ref|YP_008946231.1| - 0.13 11.9 0.9 0.67 9.6 0.9 2.1 1 1 0 1 1 1 0 piRNA pathway germ-plasm component Acetyltransf_1 PF00583.25 gi|568162939|ref|YP_008946232.1| - 3.6e-16 59.4 0.1 4.9e-16 59.0 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|568162939|ref|YP_008946232.1| - 2.1e-12 47.3 0.9 3.3e-12 46.6 0.9 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|568162939|ref|YP_008946232.1| - 4.5e-12 46.0 0.1 4.7e-12 46.0 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|568162939|ref|YP_008946232.1| - 2.5e-06 27.7 3.2 2.5e-06 27.7 3.2 1.5 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|568162939|ref|YP_008946232.1| - 4.7e-05 23.3 0.1 6.7e-05 22.8 0.1 1.2 1 0 0 1 1 1 1 FR47-like protein GNAT_acetyltr_2 PF13718.6 gi|568162939|ref|YP_008946232.1| - 0.076 12.4 0.1 0.26 10.7 0.0 1.6 1 1 1 2 2 2 0 GNAT acetyltransferase 2 DNA_pol_B PF00136.21 gi|568162940|ref|YP_008946233.1| - 9.4e-44 149.9 0.1 1.8e-43 148.9 0.1 1.5 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.19 gi|568162940|ref|YP_008946233.1| - 1e-40 140.0 8.2 5.1e-39 134.4 8.2 2.4 1 1 0 1 1 1 1 DNA polymerase family B, exonuclease domain RNase_H_2 PF13482.6 gi|568162940|ref|YP_008946233.1| - 3.9e-05 23.7 0.4 0.00023 21.2 0.1 2.4 3 0 0 3 3 3 1 RNase_H superfamily DUF1947 PF09183.10 gi|568162940|ref|YP_008946233.1| - 0.033 14.5 4.5 1.8 8.9 0.3 3.7 3 0 0 3 3 3 0 Domain of unknown function (DUF1947) CSN7a_helixI PF18392.1 gi|568162940|ref|YP_008946233.1| - 0.11 12.4 0.1 0.33 10.9 0.1 1.8 1 0 0 1 1 1 0 COP9 signalosome complex subunit 7a helix I domain Toprim_4 PF13662.6 gi|568162941|ref|YP_008946234.1| - 1.1e-10 41.8 0.7 1.2e-09 38.4 0.1 2.6 2 0 0 2 2 2 1 Toprim domain Toprim_2 PF13155.6 gi|568162941|ref|YP_008946234.1| - 1.2e-05 25.7 0.2 4.8e-05 23.7 0.0 2.1 2 0 0 2 2 2 1 Toprim-like Toprim PF01751.22 gi|568162941|ref|YP_008946234.1| - 0.00043 20.5 0.1 0.00043 20.5 0.1 2.7 2 1 0 3 3 3 1 Toprim domain DUF1822 PF08852.11 gi|568162941|ref|YP_008946234.1| - 0.0044 16.1 0.2 0.0048 16.0 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1822) RNB PF00773.19 gi|568162941|ref|YP_008946234.1| - 0.051 12.9 0.4 0.073 12.4 0.4 1.2 1 0 0 1 1 1 0 RNB domain DUF2344 PF10105.9 gi|568162941|ref|YP_008946234.1| - 4.9 7.0 7.0 2.7 7.8 1.9 2.4 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2344) tRNA-synt_1b PF00579.25 gi|568162942|ref|YP_008946235.1| - 5.3e-48 163.8 0.4 3e-36 125.2 0.1 2.0 2 0 0 2 2 2 2 tRNA synthetases class I (W and Y) CNRIP1 PF15043.6 gi|568162942|ref|YP_008946235.1| - 0.046 13.3 0.0 0.081 12.5 0.0 1.3 1 0 0 1 1 1 0 CB1 cannabinoid receptor-interacting protein 1 Ribosomal_L6e PF01159.19 gi|568162943|ref|YP_008946236.1| - 0.0011 19.5 0.9 0.0013 19.2 0.9 1.2 1 0 0 1 1 1 1 Ribosomal protein L6e UPF0047 PF01894.17 gi|568162944|ref|YP_008946237.1| - 1.5e-36 125.0 0.0 1.8e-36 124.8 0.0 1.1 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 AIRS_C PF02769.22 gi|568162945|ref|YP_008946238.1| - 4e-07 30.3 0.1 9.1e-07 29.1 0.1 1.6 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|568162945|ref|YP_008946238.1| - 5.6e-07 30.1 0.1 2e-06 28.3 0.1 2.0 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain Ribosomal_S13 PF00416.22 gi|568162946|ref|YP_008946239.1| - 6.7e-52 175.2 0.6 8e-52 175.0 0.6 1.1 1 0 0 1 1 1 1 Ribosomal protein S13/S18 HHH_4 PF14490.6 gi|568162946|ref|YP_008946239.1| - 0.0099 15.8 0.1 0.015 15.2 0.1 1.4 1 0 0 1 1 1 1 Helix-hairpin-helix containing domain FbpA PF05833.11 gi|568162946|ref|YP_008946239.1| - 0.087 11.6 0.0 0.1 11.4 0.0 1.1 1 0 0 1 1 1 0 Fibronectin-binding protein A N-terminus (FbpA) S4 PF01479.25 gi|568162947|ref|YP_008946240.1| - 2.2e-15 56.1 0.1 4.9e-15 55.0 0.1 1.6 1 0 0 1 1 1 1 S4 domain Ribosomal_S4 PF00163.19 gi|568162947|ref|YP_008946240.1| - 6.1e-05 23.9 1.6 0.00051 20.9 1.1 2.5 1 1 1 2 2 2 1 Ribosomal protein S4/S9 N-terminal domain Ribosomal_S11 PF00411.19 gi|568162948|ref|YP_008946241.1| - 2.3e-49 166.3 2.4 2.7e-49 166.1 2.4 1.0 1 0 0 1 1 1 1 Ribosomal protein S11 RNA_pol_A_bac PF01000.26 gi|568162949|ref|YP_008946242.1| - 6.9e-28 97.3 0.0 1.2e-27 96.4 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 gi|568162949|ref|YP_008946242.1| - 1.3e-12 47.0 0.0 2.1e-12 46.3 0.0 1.3 1 1 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Fer4_9 PF13187.6 gi|568162949|ref|YP_008946242.1| - 0.00079 19.5 9.9 0.0017 18.5 3.9 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|568162949|ref|YP_008946242.1| - 0.28 11.4 12.4 0.16 12.1 1.4 3.0 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|568162949|ref|YP_008946242.1| - 0.32 12.0 8.0 13 6.8 0.0 3.2 3 0 0 3 3 3 0 4Fe-4S double cluster binding domain Fer4_18 PF13746.6 gi|568162949|ref|YP_008946242.1| - 0.52 10.5 7.6 1 9.5 4.1 2.6 2 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|568162949|ref|YP_008946242.1| - 3.6 8.2 14.3 19 5.9 2.1 2.9 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|568162949|ref|YP_008946242.1| - 6.7 6.9 12.4 2.6 8.2 2.1 3.0 2 1 0 3 3 3 0 4Fe-4S dicluster domain Ribosomal_L27A PF00828.19 gi|568162950|ref|YP_008946243.1| - 3.3e-07 31.0 0.1 5.1e-07 30.4 0.1 1.3 1 1 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_L18 PF17135.4 gi|568162950|ref|YP_008946243.1| - 6.6e-07 28.9 0.2 8.3e-07 28.6 0.2 1.2 1 0 0 1 1 1 1 Ribosomal protein 60S L18 and 50S L18e Ribosomal_L13 PF00572.18 gi|568162951|ref|YP_008946244.1| - 2.1e-12 47.4 1.0 1.5e-10 41.4 1.0 2.3 1 1 0 1 1 1 1 Ribosomal protein L13 Ribosomal_S9 PF00380.19 gi|568162952|ref|YP_008946245.1| - 2.9e-26 92.4 0.1 3.3e-26 92.2 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 RNA_pol_N PF01194.17 gi|568162953|ref|YP_008946246.1| - 7.8e-30 103.0 0.5 8.7e-30 102.8 0.5 1.0 1 0 0 1 1 1 1 RNA polymerases N / 8 kDa subunit Ribosomal_S2 PF00318.20 gi|568162954|ref|YP_008946247.1| - 3.4e-27 95.1 0.0 1.4e-15 57.1 0.1 2.1 1 1 1 2 2 2 2 Ribosomal protein S2 Memo PF01875.17 gi|568162955|ref|YP_008946248.1| - 2.3e-87 292.6 0.0 2.6e-87 292.4 0.0 1.0 1 0 0 1 1 1 1 Memo-like protein LigB PF02900.18 gi|568162955|ref|YP_008946248.1| - 0.064 12.3 0.0 0.19 10.8 0.0 1.7 1 1 0 1 1 1 0 Catalytic LigB subunit of aromatic ring-opening dioxygenase COG4 PF08318.12 gi|568162956|ref|YP_008946249.1| - 0.049 12.7 0.0 0.06 12.4 0.0 1.1 1 0 0 1 1 1 0 COG4 transport protein FMN_dh PF01070.18 gi|568162957|ref|YP_008946250.1| - 2.5e-17 62.9 0.0 3.5e-14 52.6 0.0 2.1 1 1 0 1 1 1 1 FMN-dependent dehydrogenase IMPDH PF00478.25 gi|568162957|ref|YP_008946250.1| - 0.0061 15.6 1.2 1 8.3 0.1 2.6 3 0 0 3 3 3 2 IMP dehydrogenase / GMP reductase domain polyprenyl_synt PF00348.17 gi|568162958|ref|YP_008946251.1| - 2.9e-72 242.8 0.0 3.7e-72 242.5 0.0 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase Glycos_transf_4 PF00953.21 gi|568162959|ref|YP_008946252.1| - 1.3e-31 109.7 21.4 1.3e-31 109.7 21.4 2.7 2 1 1 3 3 3 1 Glycosyl transferase family 4 HAD_2 PF13419.6 gi|568162960|ref|YP_008946253.1| - 5.1e-29 101.6 0.0 6e-29 101.4 0.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|568162960|ref|YP_008946253.1| - 1.1e-16 61.8 0.2 1.2e-11 45.4 0.0 2.1 1 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|568162960|ref|YP_008946253.1| - 2.6e-09 37.8 0.0 3.9e-09 37.2 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|568162960|ref|YP_008946253.1| - 2.9e-05 24.1 0.0 7.6e-05 22.7 0.0 1.8 2 0 0 2 2 2 1 HAD-hyrolase-like Hydrolase_6 PF13344.6 gi|568162960|ref|YP_008946253.1| - 9.9e-05 22.4 0.2 0.00082 19.5 0.2 2.2 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|568162960|ref|YP_008946253.1| - 0.0064 16.3 4.4 6.6 6.4 0.0 3.2 1 1 1 3 3 3 3 haloacid dehalogenase-like hydrolase Allene_ox_cyc PF06351.11 gi|568162960|ref|YP_008946253.1| - 0.095 12.4 0.0 0.12 12.1 0.0 1.2 1 0 0 1 1 1 0 Allene oxide cyclase COX1 PF00115.20 gi|568162961|ref|YP_008946254.1| - 2.3e-73 247.5 62.7 2.3e-73 247.5 62.7 2.8 1 1 1 3 3 3 2 Cytochrome C and Quinol oxidase polypeptide I Cu-oxidase_3 PF07732.15 gi|568162962|ref|YP_008946255.1| - 0.064 13.3 0.0 0.27 11.2 0.0 2.0 2 0 0 2 2 2 0 Multicopper oxidase TatD_DNase PF01026.21 gi|568162964|ref|YP_008946257.1| - 2.7e-49 167.9 0.0 3.2e-49 167.6 0.0 1.0 1 0 0 1 1 1 1 TatD related DNase MazE_antitoxin PF04014.18 gi|568162965|ref|YP_008946258.1| - 1.6e-10 40.6 0.2 1.8e-10 40.5 0.2 1.1 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin PrlF_antitoxin PF15937.5 gi|568162965|ref|YP_008946258.1| - 0.00037 20.9 0.2 0.00042 20.7 0.2 1.0 1 0 0 1 1 1 1 prlF antitoxin for toxin YhaV_toxin eIF-1a PF01176.19 gi|568162965|ref|YP_008946258.1| - 0.00093 19.0 0.2 0.0011 18.7 0.2 1.3 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 TrmB PF01978.19 gi|568162966|ref|YP_008946259.1| - 8.1e-16 57.7 0.2 1.1e-15 57.2 0.2 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.20 gi|568162966|ref|YP_008946259.1| - 5.9e-06 26.0 0.3 1.2e-05 25.0 0.3 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR PF01047.22 gi|568162966|ref|YP_008946259.1| - 6.1e-05 22.9 0.1 9.6e-05 22.2 0.1 1.3 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|568162966|ref|YP_008946259.1| - 6.9e-05 22.7 0.0 0.00011 22.0 0.0 1.3 1 0 0 1 1 1 1 MarR family TFIIE_alpha PF02002.17 gi|568162966|ref|YP_008946259.1| - 0.00012 21.8 0.2 0.00018 21.3 0.2 1.3 1 1 0 1 1 1 1 TFIIE alpha subunit HTH_DeoR PF08220.12 gi|568162966|ref|YP_008946259.1| - 0.021 14.6 0.2 0.052 13.3 0.0 1.7 2 0 0 2 2 2 0 DeoR-like helix-turn-helix domain HTH_27 PF13463.6 gi|568162966|ref|YP_008946259.1| - 0.035 14.6 0.1 0.056 14.0 0.1 1.4 1 1 0 1 1 1 0 Winged helix DNA-binding domain Fe_dep_repress PF01325.19 gi|568162966|ref|YP_008946259.1| - 0.036 14.3 0.2 0.08 13.1 0.2 1.8 1 1 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain CENP-F_N PF10481.9 gi|568162966|ref|YP_008946259.1| - 0.046 13.4 0.1 0.054 13.1 0.1 1.1 1 0 0 1 1 1 0 Cenp-F N-terminal domain DUF4423 PF14394.6 gi|568162966|ref|YP_008946259.1| - 0.047 13.4 0.4 0.061 13.0 0.4 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4423) DUF2250 PF10007.9 gi|568162966|ref|YP_008946259.1| - 0.054 13.6 0.2 0.088 12.9 0.2 1.3 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) z-alpha PF02295.17 gi|568162966|ref|YP_008946259.1| - 0.056 13.5 1.9 0.061 13.4 0.4 1.8 2 0 0 2 2 2 0 Adenosine deaminase z-alpha domain HTH_36 PF13730.6 gi|568162966|ref|YP_008946259.1| - 0.089 12.8 0.3 0.18 11.8 0.3 1.7 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.6 gi|568162966|ref|YP_008946259.1| - 0.1 12.2 0.1 0.23 11.1 0.1 1.7 1 1 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|568162966|ref|YP_008946259.1| - 0.11 12.6 0.2 0.34 11.0 0.1 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain Diphthami_syn_2 PF01902.17 gi|568162967|ref|YP_008946260.1| - 1.6e-56 191.2 0.3 1.8e-56 191.1 0.3 1.0 1 0 0 1 1 1 1 Diphthamide synthase QueC PF06508.13 gi|568162967|ref|YP_008946260.1| - 0.013 15.0 0.0 0.29 10.6 0.0 2.4 2 1 0 3 3 3 0 Queuosine biosynthesis protein QueC DOT1 PF08123.13 gi|568162968|ref|YP_008946261.1| - 2.8e-07 30.3 0.0 9.9e-07 28.5 0.0 1.7 2 0 0 2 2 2 1 Histone methylation protein DOT1 N6_N4_Mtase PF01555.18 gi|568162968|ref|YP_008946261.1| - 0.015 15.0 0.0 0.029 14.1 0.0 1.4 2 0 0 2 2 2 0 DNA methylase Methyltransf_23 PF13489.6 gi|568162968|ref|YP_008946261.1| - 0.016 15.0 0.0 0.018 14.9 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain RrnaAD PF00398.20 gi|568162968|ref|YP_008946261.1| - 0.018 14.1 0.0 0.024 13.7 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase MetW PF07021.12 gi|568162968|ref|YP_008946261.1| - 0.022 14.4 0.0 0.035 13.7 0.0 1.4 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW Methyltransf_11 PF08241.12 gi|568162968|ref|YP_008946261.1| - 0.069 13.8 0.0 0.2 12.3 0.0 1.8 2 0 0 2 2 2 0 Methyltransferase domain MTS PF05175.14 gi|568162968|ref|YP_008946261.1| - 0.089 12.3 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain PrmA PF06325.13 gi|568162968|ref|YP_008946261.1| - 0.091 12.1 0.0 0.11 11.9 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_4 PF02390.17 gi|568162968|ref|YP_008946261.1| - 0.1 12.0 0.0 0.18 11.3 0.0 1.4 2 0 0 2 2 2 0 Putative methyltransferase Methyltransf_25 PF13649.6 gi|568162968|ref|YP_008946261.1| - 0.11 13.3 0.0 0.25 12.1 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase domain FtsJ PF01728.19 gi|568162968|ref|YP_008946261.1| - 0.11 12.7 0.0 0.16 12.1 0.0 1.3 1 1 0 1 1 1 0 FtsJ-like methyltransferase NTP_transf_3 PF12804.7 gi|568162969|ref|YP_008946262.1| - 6e-14 52.7 0.0 8.4e-14 52.2 0.0 1.3 1 1 0 1 1 1 1 MobA-like NTP transferase domain MoeA_N PF03453.17 gi|568162970|ref|YP_008946263.1| - 5e-33 114.1 0.0 8e-33 113.4 0.0 1.3 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 gi|568162970|ref|YP_008946263.1| - 2.4e-18 66.2 0.0 5.1e-18 65.1 0.0 1.5 2 0 0 2 2 2 1 Probable molybdopterin binding domain 7TMR-HDED PF07697.11 gi|568162970|ref|YP_008946263.1| - 0.0052 16.9 2.4 0.019 15.1 0.3 2.3 2 0 0 2 2 2 1 7TM-HD extracellular MMS22L_N PF14910.6 gi|568162970|ref|YP_008946263.1| - 0.12 10.7 0.0 0.18 10.2 0.0 1.1 1 0 0 1 1 1 0 S-phase genomic integrity recombination mediator, N-terminal MobB PF03205.14 gi|568162971|ref|YP_008946264.1| - 9.2e-22 77.4 0.3 4.6e-21 75.1 0.3 1.9 1 1 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B DAHP_snth_FXD PF18152.1 gi|568162971|ref|YP_008946264.1| - 0.14 12.1 0.2 21 5.0 0.0 2.6 2 1 1 3 3 3 0 DAHP synthase ferredoxin-like domain Methyltransf_11 PF08241.12 gi|568162972|ref|YP_008946265.1| - 7.4e-16 58.6 0.0 1.1e-15 58.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|568162972|ref|YP_008946265.1| - 1.3e-13 51.5 0.0 1.9e-13 50.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|568162972|ref|YP_008946265.1| - 4.6e-10 39.6 0.0 7.4e-10 38.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|568162972|ref|YP_008946265.1| - 1.7e-09 37.4 0.1 1.4e-08 34.3 0.0 2.1 1 1 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|568162972|ref|YP_008946265.1| - 4.8e-08 33.6 0.0 8.2e-08 32.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|568162972|ref|YP_008946265.1| - 9.5e-07 28.7 0.0 1.6e-06 28.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain DREV PF05219.12 gi|568162972|ref|YP_008946265.1| - 0.0087 15.2 0.0 0.011 14.9 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase Methyltransf_8 PF05148.15 gi|568162972|ref|YP_008946265.1| - 0.021 14.7 0.0 0.028 14.3 0.0 1.3 1 0 0 1 1 1 0 Hypothetical methyltransferase DUF4491 PF14898.6 gi|568162973|ref|YP_008946266.1| - 5.7 7.4 14.4 1.4 9.4 1.9 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4491) DUF4234 PF14018.6 gi|568162973|ref|YP_008946266.1| - 7.9 6.7 15.6 0.082 13.0 6.7 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4234) DUF4015 PF13200.6 gi|568162974|ref|YP_008946267.1| - 0.0066 15.5 0.1 0.008 15.3 0.1 1.1 1 0 0 1 1 1 1 Putative glycosyl hydrolase domain DUF5342 PF17277.2 gi|568162974|ref|YP_008946267.1| - 0.093 13.1 0.0 0.14 12.5 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5342) Ribosomal_S8 PF00410.19 gi|568162975|ref|YP_008946268.1| - 0.0057 16.6 0.2 0.0074 16.2 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein S8 Fe_dep_repr_C PF02742.15 gi|568162976|ref|YP_008946269.1| - 8.9e-28 96.2 1.9 1.3e-27 95.6 0.6 1.9 2 0 0 2 2 2 1 Iron dependent repressor, metal binding and dimerisation domain Fe_dep_repress PF01325.19 gi|568162976|ref|YP_008946269.1| - 9.6e-12 44.9 0.1 3.2e-11 43.2 0.0 1.9 2 0 0 2 2 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_45 PF14947.6 gi|568162976|ref|YP_008946269.1| - 7.9e-08 32.2 0.7 1.5e-07 31.3 0.2 1.7 2 0 0 2 2 1 1 Winged helix-turn-helix HTH_5 PF01022.20 gi|568162976|ref|YP_008946269.1| - 1.4e-06 28.0 0.0 2.6e-06 27.2 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family FeoA PF04023.14 gi|568162976|ref|YP_008946269.1| - 1.6e-06 28.3 0.2 4.8e-06 26.7 0.1 1.9 2 0 0 2 2 2 1 FeoA domain MarR PF01047.22 gi|568162976|ref|YP_008946269.1| - 6.3e-06 26.0 0.0 1.6e-05 24.7 0.0 1.7 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|568162976|ref|YP_008946269.1| - 1.5e-05 25.4 0.1 3.4e-05 24.2 0.1 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_DeoR PF08220.12 gi|568162976|ref|YP_008946269.1| - 2.6e-05 23.9 0.1 6.1e-05 22.7 0.1 1.7 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_24 PF13412.6 gi|568162976|ref|YP_008946269.1| - 9.3e-05 21.9 0.0 0.00029 20.3 0.0 1.9 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|568162976|ref|YP_008946269.1| - 0.00014 21.7 0.0 0.0003 20.6 0.0 1.5 1 0 0 1 1 1 1 MarR family DUF4423 PF14394.6 gi|568162976|ref|YP_008946269.1| - 0.00017 21.3 0.1 0.00038 20.2 0.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_41 PF14502.6 gi|568162976|ref|YP_008946269.1| - 0.00025 20.7 0.0 0.00058 19.5 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|568162976|ref|YP_008946269.1| - 0.00042 20.2 0.0 0.00096 19.0 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HemN_C PF06969.16 gi|568162976|ref|YP_008946269.1| - 0.0018 18.3 0.0 0.0043 17.1 0.0 1.6 1 0 0 1 1 1 1 HemN C-terminal domain GntR PF00392.21 gi|568162976|ref|YP_008946269.1| - 0.0023 17.5 0.0 0.03 14.0 0.0 2.7 3 0 0 3 3 3 1 Bacterial regulatory proteins, gntR family HTH_Crp_2 PF13545.6 gi|568162976|ref|YP_008946269.1| - 0.003 17.5 0.1 0.0071 16.3 0.1 1.7 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_34 PF13601.6 gi|568162976|ref|YP_008946269.1| - 0.0034 17.5 0.1 0.015 15.5 0.1 2.0 1 1 0 1 1 1 1 Winged helix DNA-binding domain HTH_28 PF13518.6 gi|568162976|ref|YP_008946269.1| - 0.0036 17.4 0.0 0.0079 16.3 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_36 PF13730.6 gi|568162976|ref|YP_008946269.1| - 0.0036 17.2 0.0 0.0063 16.5 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_1 PF00126.27 gi|568162976|ref|YP_008946269.1| - 0.0041 17.1 0.1 0.012 15.5 0.1 1.8 1 1 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family AAA_assoc_C PF09821.9 gi|568162976|ref|YP_008946269.1| - 0.0054 17.3 0.1 0.0095 16.5 0.1 1.4 1 0 0 1 1 1 1 C-terminal AAA-associated domain PadR PF03551.14 gi|568162976|ref|YP_008946269.1| - 0.0083 16.1 0.1 0.062 13.3 0.0 2.5 2 1 0 2 2 2 1 Transcriptional regulator PadR-like family Ribosomal_S19e PF01090.19 gi|568162976|ref|YP_008946269.1| - 0.0087 15.8 0.0 0.014 15.0 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein S19e Rrf2 PF02082.20 gi|568162976|ref|YP_008946269.1| - 0.0091 16.3 0.0 0.033 14.5 0.0 1.9 2 0 0 2 2 1 1 Transcriptional regulator HTH_IclR PF09339.10 gi|568162976|ref|YP_008946269.1| - 0.017 14.9 0.1 0.048 13.5 0.0 1.8 2 0 0 2 2 1 0 IclR helix-turn-helix domain DUF4364 PF14277.6 gi|568162976|ref|YP_008946269.1| - 0.037 13.8 0.2 0.11 12.2 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4364) HxlR PF01638.17 gi|568162976|ref|YP_008946269.1| - 0.05 13.4 0.1 0.2 11.5 0.1 2.1 2 1 0 2 2 1 0 HxlR-like helix-turn-helix HTH_11 PF08279.12 gi|568162976|ref|YP_008946269.1| - 0.054 13.4 0.7 0.22 11.5 0.1 2.2 2 0 0 2 2 2 0 HTH domain DUF2250 PF10007.9 gi|568162976|ref|YP_008946269.1| - 0.058 13.5 0.1 0.12 12.5 0.1 1.6 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) B-block_TFIIIC PF04182.12 gi|568162976|ref|YP_008946269.1| - 0.08 13.1 0.2 0.21 11.8 0.0 1.7 2 0 0 2 2 1 0 B-block binding subunit of TFIIIC Topoisom_bac PF01131.20 gi|568162976|ref|YP_008946269.1| - 0.082 11.9 0.0 0.14 11.2 0.0 1.2 1 0 0 1 1 1 0 DNA topoisomerase FeoC PF09012.10 gi|568162976|ref|YP_008946269.1| - 0.12 12.4 0.0 0.23 11.5 0.0 1.5 1 0 0 1 1 1 0 FeoC like transcriptional regulator HisKA PF00512.25 gi|568162976|ref|YP_008946269.1| - 0.16 12.1 1.2 14 5.8 0.0 2.5 2 0 0 2 2 2 0 His Kinase A (phospho-acceptor) domain DUF4147 PF13660.6 gi|568162977|ref|YP_008946270.1| - 3.4e-50 170.7 0.0 4.7e-50 170.3 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4147) MOFRL PF05161.13 gi|568162977|ref|YP_008946270.1| - 2.9e-22 78.9 0.3 8e-22 77.5 0.1 1.8 2 0 0 2 2 2 1 MOFRL family BPD_transp_1 PF00528.22 gi|568162978|ref|YP_008946272.1| - 5.2e-14 52.4 13.6 5.2e-14 52.4 13.6 2.2 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component TIM PF00121.18 gi|568162979|ref|YP_008946274.1| - 5.5e-13 48.8 0.2 1.6e-12 47.3 0.0 1.8 2 0 0 2 2 2 1 Triosephosphate isomerase ThiG PF05690.14 gi|568162979|ref|YP_008946274.1| - 3e-06 26.8 0.4 4.9e-06 26.0 0.4 1.3 1 0 0 1 1 1 1 Thiazole biosynthesis protein ThiG Glu_synthase PF01645.17 gi|568162979|ref|YP_008946274.1| - 6.3e-06 25.6 0.1 1.1e-05 24.7 0.1 1.3 1 0 0 1 1 1 1 Conserved region in glutamate synthase His_biosynth PF00977.21 gi|568162979|ref|YP_008946274.1| - 1.2e-05 24.9 0.8 0.0046 16.4 0.2 2.1 2 0 0 2 2 2 2 Histidine biosynthesis protein FMN_dh PF01070.18 gi|568162979|ref|YP_008946274.1| - 2.7e-05 23.4 0.1 4.1e-05 22.8 0.1 1.2 1 0 0 1 1 1 1 FMN-dependent dehydrogenase Trp_syntA PF00290.20 gi|568162979|ref|YP_008946274.1| - 0.00083 18.3 0.3 0.0017 17.3 0.3 1.5 1 0 0 1 1 1 1 Tryptophan synthase alpha chain NMO PF03060.15 gi|568162979|ref|YP_008946274.1| - 0.0082 15.6 0.9 0.011 15.2 0.2 1.5 2 0 0 2 2 2 1 Nitronate monooxygenase G3P_antiterm PF04309.12 gi|568162979|ref|YP_008946274.1| - 0.026 14.0 1.7 0.031 13.7 0.2 1.8 2 0 0 2 2 2 0 Glycerol-3-phosphate responsive antiterminator IMPDH PF00478.25 gi|568162979|ref|YP_008946274.1| - 0.03 13.3 0.4 0.045 12.8 0.4 1.2 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain DUF561 PF04481.12 gi|568162979|ref|YP_008946274.1| - 0.055 12.6 0.0 0.11 11.6 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF561) IGPS PF00218.21 gi|568162979|ref|YP_008946274.1| - 0.07 12.3 0.0 0.12 11.5 0.0 1.4 1 0 0 1 1 1 0 Indole-3-glycerol phosphate synthase DUF429 PF04250.13 gi|568162980|ref|YP_008946275.1| - 6.9e-08 32.5 0.1 0.0011 18.8 0.0 2.4 1 1 1 2 2 2 2 Protein of unknown function (DUF429) Na_H_Exchanger PF00999.21 gi|568164733|ref|YP_008946277.1| - 3.6e-10 39.2 15.1 4.1e-10 39.0 15.1 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family Esterase PF00756.20 gi|568162981|ref|YP_008946278.1| - 5.2e-14 52.5 0.0 1.1e-13 51.4 0.0 1.6 1 1 0 1 1 1 1 Putative esterase DUF2920 PF11144.8 gi|568162981|ref|YP_008946278.1| - 0.0029 16.9 0.0 0.0038 16.4 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF2920) Hydrolase_4 PF12146.8 gi|568162981|ref|YP_008946278.1| - 0.004 16.5 0.0 0.0059 15.9 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 gi|568162981|ref|YP_008946278.1| - 0.034 13.8 0.0 0.048 13.3 0.0 1.4 1 0 0 1 1 1 0 alpha/beta hydrolase fold Esterase_phd PF10503.9 gi|568162981|ref|YP_008946278.1| - 0.15 11.5 0.0 0.24 10.9 0.0 1.2 1 0 0 1 1 1 0 Esterase PHB depolymerase BPD_transp_1 PF00528.22 gi|568162983|ref|YP_008946280.1| - 6.1e-09 35.9 19.3 6.1e-09 35.9 19.3 2.3 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|568164734|ref|YP_008946281.1| - 1.8e-07 31.8 0.1 2e-07 31.6 0.1 1.1 1 0 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 gi|568164734|ref|YP_008946281.1| - 8.6e-06 25.4 0.0 1e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 gi|568164734|ref|YP_008946281.1| - 0.00016 21.6 0.1 0.00016 21.6 0.1 1.1 1 0 0 1 1 1 1 RsgA GTPase AAA_16 PF13191.6 gi|568164734|ref|YP_008946281.1| - 0.00027 21.4 0.0 0.00029 21.3 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_21 PF13304.6 gi|568164734|ref|YP_008946281.1| - 0.00048 20.0 0.2 0.00055 19.8 0.2 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|568164734|ref|YP_008946281.1| - 0.00073 19.8 0.0 0.00084 19.6 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|568164734|ref|YP_008946281.1| - 0.00083 19.1 0.0 0.00091 19.0 0.0 1.1 1 0 0 1 1 1 1 AAA domain KAP_NTPase PF07693.14 gi|568164734|ref|YP_008946281.1| - 0.00099 18.4 0.1 0.001 18.4 0.1 1.0 1 0 0 1 1 1 1 KAP family P-loop domain AAA_PrkA PF08298.11 gi|568164734|ref|YP_008946281.1| - 0.0014 17.6 0.0 0.0016 17.4 0.0 1.1 1 0 0 1 1 1 1 PrkA AAA domain RNA_helicase PF00910.22 gi|568164734|ref|YP_008946281.1| - 0.0016 18.8 0.0 0.0023 18.3 0.0 1.2 1 0 0 1 1 1 1 RNA helicase AAA_24 PF13479.6 gi|568164734|ref|YP_008946281.1| - 0.0029 17.4 0.0 0.0037 17.0 0.0 1.2 1 0 0 1 1 1 1 AAA domain Rad17 PF03215.15 gi|568164734|ref|YP_008946281.1| - 0.0034 17.3 0.0 0.0037 17.2 0.0 1.1 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_18 PF13238.6 gi|568164734|ref|YP_008946281.1| - 0.0036 17.9 0.1 0.0054 17.3 0.1 1.3 1 0 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 gi|568164734|ref|YP_008946281.1| - 0.0047 16.9 0.1 0.005 16.8 0.1 1.2 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea Cytidylate_kin PF02224.18 gi|568164734|ref|YP_008946281.1| - 0.0048 16.6 0.0 0.015 15.0 0.0 1.7 1 1 1 2 2 2 1 Cytidylate kinase AAA_23 PF13476.6 gi|568164734|ref|YP_008946281.1| - 0.0052 17.3 0.1 0.0068 16.9 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_10 PF12846.7 gi|568164734|ref|YP_008946281.1| - 0.0058 15.6 0.1 0.0069 15.3 0.1 1.0 1 0 0 1 1 1 1 AAA-like domain PRK PF00485.18 gi|568164734|ref|YP_008946281.1| - 0.0072 16.1 0.0 0.0086 15.8 0.0 1.1 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family AAA_15 PF13175.6 gi|568164734|ref|YP_008946281.1| - 0.0091 15.7 0.7 0.011 15.5 0.7 1.1 1 0 0 1 1 1 1 AAA ATPase domain cobW PF02492.19 gi|568164734|ref|YP_008946281.1| - 0.0095 15.5 0.0 0.011 15.3 0.0 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain T2SSE PF00437.20 gi|568164734|ref|YP_008946281.1| - 0.01 14.9 0.0 0.011 14.9 0.0 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein PIF1 PF05970.14 gi|568164734|ref|YP_008946281.1| - 0.01 15.1 0.0 0.012 14.8 0.0 1.0 1 0 0 1 1 1 0 PIF1-like helicase ATP_bind_1 PF03029.17 gi|568164734|ref|YP_008946281.1| - 0.011 15.6 0.0 0.014 15.2 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein NB-ARC PF00931.22 gi|568164734|ref|YP_008946281.1| - 0.012 14.8 0.0 0.014 14.6 0.0 1.1 1 0 0 1 1 1 0 NB-ARC domain AAA_5 PF07728.14 gi|568164734|ref|YP_008946281.1| - 0.013 15.5 0.0 0.018 15.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) NTPase_1 PF03266.15 gi|568164734|ref|YP_008946281.1| - 0.015 15.2 0.0 0.021 14.8 0.0 1.2 1 0 0 1 1 1 0 NTPase ABC_ATPase PF09818.9 gi|568164734|ref|YP_008946281.1| - 0.028 13.2 0.0 0.028 13.2 0.0 1.1 1 0 0 1 1 1 0 Predicted ATPase of the ABC class NACHT PF05729.12 gi|568164734|ref|YP_008946281.1| - 0.029 14.3 0.0 0.036 14.0 0.0 1.2 1 0 0 1 1 1 0 NACHT domain AAA_33 PF13671.6 gi|568164734|ref|YP_008946281.1| - 0.029 14.5 0.0 0.037 14.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.6 gi|568164734|ref|YP_008946281.1| - 0.03 14.7 0.0 0.035 14.4 0.0 1.1 1 0 0 1 1 1 0 AAA domain SMC_N PF02463.19 gi|568164734|ref|YP_008946281.1| - 0.031 13.7 0.1 0.033 13.6 0.1 1.2 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain dNK PF01712.19 gi|568164734|ref|YP_008946281.1| - 0.039 13.8 0.1 0.049 13.5 0.1 1.2 1 0 0 1 1 1 0 Deoxynucleoside kinase G-alpha PF00503.20 gi|568164734|ref|YP_008946281.1| - 0.039 13.1 0.1 0.04 13.1 0.1 1.1 1 0 0 1 1 1 0 G-protein alpha subunit Mg_chelatase PF01078.21 gi|568164734|ref|YP_008946281.1| - 0.047 13.1 0.0 0.05 13.0 0.0 1.1 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_28 PF13521.6 gi|568164734|ref|YP_008946281.1| - 0.052 13.8 0.0 0.062 13.5 0.0 1.1 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.17 gi|568164734|ref|YP_008946281.1| - 0.056 13.5 0.1 0.066 13.3 0.1 1.1 1 0 0 1 1 1 0 Helicase HerA, central domain MMR_HSR1 PF01926.23 gi|568164734|ref|YP_008946281.1| - 0.062 13.4 0.1 0.079 13.0 0.1 1.2 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_14 PF13173.6 gi|568164734|ref|YP_008946281.1| - 0.065 13.3 0.0 0.094 12.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 gi|568164734|ref|YP_008946281.1| - 0.074 12.6 0.0 0.074 12.6 0.0 1.1 1 0 0 1 1 1 0 P-loop containing dynein motor region FtsK_SpoIIIE PF01580.18 gi|568164734|ref|YP_008946281.1| - 0.1 11.9 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_25 PF13481.6 gi|568164734|ref|YP_008946281.1| - 0.19 11.3 0.0 0.23 11.0 0.0 1.1 1 0 0 1 1 1 0 AAA domain OrfB_Zn_ribbon PF07282.11 gi|568162984|ref|YP_008946282.1| - 4.7e-19 68.1 2.5 7.6e-18 64.2 0.2 2.7 3 0 0 3 3 3 1 Putative transposase DNA-binding domain OrfB_IS605 PF01385.19 gi|568162984|ref|YP_008946282.1| - 0.00033 20.9 1.6 0.00069 19.8 0.4 1.9 2 0 0 2 2 2 1 Probable transposase DUF3543 PF12063.8 gi|568162984|ref|YP_008946282.1| - 0.077 12.4 0.2 0.91 8.9 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3543) HypA PF01155.19 gi|568162984|ref|YP_008946282.1| - 0.15 12.1 0.1 0.61 10.1 0.1 2.0 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA C1_1 PF00130.22 gi|568162984|ref|YP_008946282.1| - 0.15 11.9 0.4 0.3 11.0 0.4 1.4 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) TF_Zn_Ribbon PF08271.12 gi|568162984|ref|YP_008946282.1| - 0.16 11.5 0.8 0.3 10.6 0.8 1.4 1 0 0 1 1 1 0 TFIIB zinc-binding Zn_Tnp_IS1595 PF12760.7 gi|568162984|ref|YP_008946282.1| - 0.29 11.2 3.3 0.55 10.3 3.3 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain ABC_tran PF00005.27 gi|568162985|ref|YP_008946283.1| - 3.8e-19 69.6 0.0 5e-19 69.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|568162985|ref|YP_008946283.1| - 6.5e-05 22.5 0.1 7.5e-05 22.3 0.1 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain STAS PF01740.21 gi|568162985|ref|YP_008946283.1| - 0.016 14.8 0.2 0.033 13.8 0.2 1.5 1 1 0 1 1 1 0 STAS domain DUF3619 PF12279.8 gi|568162985|ref|YP_008946283.1| - 0.093 13.1 0.0 0.14 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3619) DUF1811 PF08838.10 gi|568162985|ref|YP_008946283.1| - 0.11 12.8 0.2 0.52 10.6 0.0 2.3 3 1 0 3 3 3 0 Protein of unknown function (DUF1811) NUDIX PF00293.28 gi|568162986|ref|YP_008946284.1| - 2.1e-09 37.5 0.1 3.1e-09 37.0 0.1 1.3 1 1 0 1 1 1 1 NUDIX domain Lyase_1 PF00206.20 gi|568162987|ref|YP_008946285.1| - 1.7e-101 339.7 0.0 2.2e-101 339.3 0.0 1.1 1 0 0 1 1 1 1 Lyase FumaraseC_C PF10415.9 gi|568162987|ref|YP_008946285.1| - 4.4e-13 49.4 0.4 1.3e-12 47.9 0.1 2.0 2 0 0 2 2 2 1 Fumarase C C-terminus RuvA_C PF07499.13 gi|568162987|ref|YP_008946285.1| - 0.014 15.8 0.0 0.26 11.8 0.0 2.9 3 0 0 3 3 3 0 RuvA, C-terminal domain Apolipoprotein PF01442.18 gi|568162987|ref|YP_008946285.1| - 0.043 13.7 0.2 1.2 9.0 0.1 2.2 2 0 0 2 2 2 0 Apolipoprotein A1/A4/E domain Ribosomal_S30AE PF02482.19 gi|568162987|ref|YP_008946285.1| - 0.092 13.5 0.0 1.3 9.9 0.0 2.3 2 0 0 2 2 2 0 Sigma 54 modulation protein / S30EA ribosomal protein Lactamase_B PF00753.27 gi|568162988|ref|YP_008946286.1| - 4.2e-27 95.5 0.4 5.1e-27 95.2 0.4 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|568162988|ref|YP_008946286.1| - 9.9e-05 21.9 0.0 0.00012 21.7 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|568162988|ref|YP_008946286.1| - 0.099 12.5 0.1 0.12 12.2 0.1 1.3 1 1 0 1 1 1 0 Beta-lactamase superfamily domain Glycos_transf_2 PF00535.26 gi|568164735|ref|YP_008946287.1| - 4.3e-17 62.4 0.0 6.8e-17 61.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|568164735|ref|YP_008946287.1| - 8.9e-15 55.2 0.0 1.3e-14 54.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 gi|568164735|ref|YP_008946287.1| - 6.6e-13 48.5 0.0 1.3e-12 47.5 0.0 1.4 1 1 0 1 1 1 1 Glycosyl transferase family 21 Glyco_trans_2_3 PF13632.6 gi|568164735|ref|YP_008946287.1| - 1e-11 45.1 0.2 2e-11 44.2 0.2 1.6 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_2 PF10111.9 gi|568164735|ref|YP_008946287.1| - 0.023 14.2 0.1 0.045 13.2 0.1 1.6 1 1 1 2 2 2 0 Glycosyltransferase like family 2 Chitin_synth_2 PF03142.15 gi|568164735|ref|YP_008946287.1| - 0.049 12.2 2.7 0.63 8.6 1.4 2.9 2 1 0 2 2 2 0 Chitin synthase MMPL PF03176.15 gi|568162989|ref|YP_008946288.1| - 5.7e-50 170.1 25.3 1.7e-27 96.3 11.7 2.2 2 0 0 2 2 2 2 MMPL family Helicase_RecD PF05127.14 gi|568162990|ref|YP_008946289.1| - 4.4e-48 163.5 0.0 7e-48 162.8 0.0 1.3 1 0 0 1 1 1 1 Helicase GNAT_acetyltr_2 PF13718.6 gi|568162990|ref|YP_008946289.1| - 3.2e-30 105.2 0.0 1.2e-20 73.9 0.0 2.5 1 1 1 2 2 2 2 GNAT acetyltransferase 2 DUF1726 PF08351.11 gi|568162990|ref|YP_008946289.1| - 4.2e-21 74.7 0.0 1e-20 73.4 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF1726) Acetyltransf_1 PF00583.25 gi|568162990|ref|YP_008946289.1| - 2.6e-06 27.7 0.0 9.2e-06 25.9 0.0 2.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|568162990|ref|YP_008946289.1| - 3.3e-05 24.2 0.1 0.0003 21.2 0.0 2.6 2 1 0 2 2 2 1 Acetyltransferase (GNAT) domain AAA_30 PF13604.6 gi|568162990|ref|YP_008946289.1| - 0.00039 20.2 0.0 0.0025 17.6 0.0 2.2 1 1 1 2 2 2 1 AAA domain Acetyltransf_10 PF13673.7 gi|568162990|ref|YP_008946289.1| - 0.00083 19.3 0.0 0.0025 17.8 0.0 1.7 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain AAA_22 PF13401.6 gi|568162990|ref|YP_008946289.1| - 0.0013 19.1 0.1 0.038 14.3 0.0 2.7 1 1 1 2 2 2 1 AAA domain tRNA_bind_2 PF13725.6 gi|568162990|ref|YP_008946289.1| - 0.0033 17.1 0.0 0.0067 16.1 0.0 1.4 1 0 0 1 1 1 1 Possible tRNA binding domain SpoIIM PF01944.17 gi|568162991|ref|YP_008946290.1| - 2.1e-07 31.1 10.8 2.1e-07 31.1 10.8 1.8 2 0 0 2 2 2 1 Stage II sporulation protein M Cytochrom_C PF00034.21 gi|568162991|ref|YP_008946290.1| - 0.23 12.6 0.1 0.35 12.0 0.1 1.3 1 0 0 1 1 1 0 Cytochrome c Exo_endo_phos PF03372.23 gi|568162992|ref|YP_008946291.1| - 2.6e-12 46.8 0.0 3.9e-12 46.2 0.0 1.3 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 gi|568162992|ref|YP_008946291.1| - 9.6e-05 22.2 0.0 0.00026 20.8 0.0 1.8 2 1 0 2 2 2 1 Endonuclease-reverse transcriptase TusA PF01206.17 gi|568162993|ref|YP_008946292.1| - 7.2e-15 54.6 0.5 8.5e-15 54.3 0.5 1.1 1 0 0 1 1 1 1 Sulfurtransferase TusA PurS PF02700.14 gi|568162993|ref|YP_008946292.1| - 0.063 13.5 0.0 0.087 13.0 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosylformylglycinamidine (FGAM) synthase Sigma70_r4_2 PF08281.12 gi|568162993|ref|YP_008946292.1| - 0.21 11.3 0.0 0.32 10.7 0.0 1.3 1 0 0 1 1 1 0 Sigma-70, region 4 DUF1641 PF07849.11 gi|568162994|ref|YP_008946293.1| - 1.3e-10 41.0 1.4 1.7e-10 40.6 0.2 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF1641) CDT1 PF08839.11 gi|568162994|ref|YP_008946293.1| - 0.016 15.5 0.1 6.4 7.0 0.0 2.4 1 1 0 2 2 2 0 DNA replication factor CDT1 like GED PF02212.18 gi|568162994|ref|YP_008946293.1| - 0.028 14.5 5.1 2 8.6 0.9 2.8 2 1 0 2 2 2 0 Dynamin GTPase effector domain DUF1719 PF08224.11 gi|568162994|ref|YP_008946293.1| - 0.14 11.3 0.3 0.25 10.4 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1719) Cas_Csa4 PF09703.10 gi|568162994|ref|YP_008946293.1| - 0.14 11.5 1.9 0.41 9.9 1.3 2.3 1 1 0 1 1 1 0 CRISPR-associated protein (Cas_Csa4) Enkurin PF13864.6 gi|568162994|ref|YP_008946293.1| - 0.33 11.4 3.4 4 7.9 0.3 2.5 2 0 0 2 2 2 0 Calmodulin-binding Myotub-related PF06602.14 gi|568162994|ref|YP_008946293.1| - 0.45 9.4 4.0 3.4 6.5 0.4 2.1 2 0 0 2 2 2 0 Myotubularin-like phosphatase domain MgtE_N PF03448.17 gi|568162994|ref|YP_008946293.1| - 0.59 10.8 17.6 1.3 9.7 2.3 4.4 1 1 4 5 5 5 0 MgtE intracellular N domain DUF3847 PF12958.7 gi|568162994|ref|YP_008946293.1| - 0.67 10.1 2.7 15 5.8 0.0 4.1 4 1 1 5 5 5 0 Protein of unknown function (DUF3847) DUF1542 PF07564.11 gi|568162994|ref|YP_008946293.1| - 1.8 8.7 4.6 4.6 7.4 0.8 2.5 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1542) Swi6_N PF18530.1 gi|568162994|ref|YP_008946293.1| - 4.2 7.6 8.7 1.4 9.1 1.3 3.3 3 2 0 3 3 3 0 Swi6 N-terminal domain UPF0728 PF15092.6 gi|568164736|ref|YP_008946294.1| - 0.021 14.7 0.4 0.15 11.9 0.2 2.0 2 0 0 2 2 2 0 Uncharacterised protein family UPF0728 MucBP_2 PF17965.1 gi|568164736|ref|YP_008946294.1| - 0.045 14.3 0.1 0.3 11.7 0.0 2.1 2 0 0 2 2 2 0 Mucin binding domain TrmB PF01978.19 gi|568162995|ref|YP_008946295.1| - 8.5e-13 48.0 0.0 1.1e-12 47.6 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|568162995|ref|YP_008946295.1| - 3.3e-09 36.5 0.0 5.1e-09 35.9 0.0 1.4 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|568162995|ref|YP_008946295.1| - 2e-07 30.8 0.0 3.1e-07 30.2 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|568162995|ref|YP_008946295.1| - 3e-07 29.9 0.0 4.7e-07 29.3 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TFIIE_alpha PF02002.17 gi|568162995|ref|YP_008946295.1| - 5.4e-05 23.0 0.0 6.3e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_27 PF13463.6 gi|568162995|ref|YP_008946295.1| - 7.6e-05 23.1 0.0 0.00013 22.4 0.0 1.4 1 1 0 1 1 1 1 Winged helix DNA-binding domain HTH_IclR PF09339.10 gi|568162995|ref|YP_008946295.1| - 0.0001 22.0 0.0 0.00018 21.3 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_36 PF13730.6 gi|568162995|ref|YP_008946295.1| - 0.00033 20.6 0.0 0.00049 20.0 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain Mga PF05043.13 gi|568162995|ref|YP_008946295.1| - 0.00075 20.0 0.0 0.0011 19.5 0.0 1.3 1 0 0 1 1 1 1 Mga helix-turn-helix domain HTH_34 PF13601.6 gi|568162995|ref|YP_008946295.1| - 0.0011 19.1 0.0 0.0016 18.6 0.0 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain Fe_dep_repress PF01325.19 gi|568162995|ref|YP_008946295.1| - 0.0028 17.8 0.0 0.0045 17.1 0.0 1.5 1 1 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_5 PF01022.20 gi|568162995|ref|YP_008946295.1| - 0.0069 16.2 0.0 0.011 15.6 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family GntR PF00392.21 gi|568162995|ref|YP_008946295.1| - 0.01 15.5 0.0 0.034 13.8 0.0 1.9 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family HTH_20 PF12840.7 gi|568162995|ref|YP_008946295.1| - 0.014 15.4 0.0 0.021 14.9 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_11 PF08279.12 gi|568162995|ref|YP_008946295.1| - 0.017 15.0 0.0 0.03 14.3 0.0 1.4 1 0 0 1 1 1 0 HTH domain DUF4423 PF14394.6 gi|568162995|ref|YP_008946295.1| - 0.033 13.9 0.0 0.043 13.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) DUF5062 PF16691.5 gi|568162995|ref|YP_008946295.1| - 0.076 13.2 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5062) Dimerisation2 PF16864.5 gi|568162995|ref|YP_008946295.1| - 0.077 13.0 0.0 0.14 12.1 0.0 1.4 1 0 0 1 1 1 0 Dimerisation domain DUF505 PF04458.12 gi|568162995|ref|YP_008946295.1| - 0.1 11.0 0.0 0.14 10.5 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF505) HTH_Crp_2 PF13545.6 gi|568162995|ref|YP_008946295.1| - 0.14 12.2 0.0 0.25 11.3 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain RPA_C PF08784.11 gi|568162995|ref|YP_008946295.1| - 0.19 12.4 0.0 0.25 12.0 0.0 1.2 1 0 0 1 1 1 0 Replication protein A C terminal RmlD_sub_bind PF04321.17 gi|568162996|ref|YP_008946296.1| - 1e-08 34.6 0.0 1.2e-08 34.5 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain Epimerase PF01370.21 gi|568162996|ref|YP_008946296.1| - 1.2e-08 34.7 0.1 1.7e-08 34.3 0.1 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Sacchrp_dh_NADP PF03435.18 gi|568162996|ref|YP_008946296.1| - 1.5e-07 31.7 0.0 2.6e-07 30.9 0.0 1.5 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Aldo_ket_red PF00248.21 gi|568162997|ref|YP_008946297.1| - 1.3e-68 231.3 0.1 1.1e-66 225.0 0.1 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family Pyr_redox_2 PF07992.14 gi|568162998|ref|YP_008946298.1| - 4.7e-51 173.8 0.5 7.5e-51 173.1 0.1 1.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|568162998|ref|YP_008946298.1| - 2.7e-18 66.3 5.5 1.1e-12 48.3 0.1 4.1 6 0 0 6 6 5 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|568162998|ref|YP_008946298.1| - 8.7e-15 54.9 0.1 3.1e-14 53.2 0.1 2.0 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox_3 PF13738.6 gi|568162998|ref|YP_008946298.1| - 5.6e-14 52.1 0.2 1.3e-09 37.8 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|568162998|ref|YP_008946298.1| - 9.9e-14 51.2 5.5 3.9e-06 26.2 1.0 4.0 3 1 0 3 3 3 3 Glucose inhibited division protein A NAD_binding_8 PF13450.6 gi|568162998|ref|YP_008946298.1| - 1.9e-10 40.8 2.8 3.4e-05 24.0 0.1 3.0 3 0 0 3 3 3 2 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 gi|568162998|ref|YP_008946298.1| - 8.4e-10 38.3 6.0 3.6e-06 26.3 0.0 3.5 4 0 0 4 4 4 2 FAD binding domain HI0933_like PF03486.14 gi|568162998|ref|YP_008946298.1| - 1.7e-08 33.6 1.9 8.3e-06 24.8 0.0 3.6 4 0 0 4 4 4 1 HI0933-like protein FAD_oxidored PF12831.7 gi|568162998|ref|YP_008946298.1| - 1.8e-08 34.2 0.8 1e-06 28.4 0.0 2.3 2 0 0 2 2 2 1 FAD dependent oxidoreductase AlaDh_PNT_C PF01262.21 gi|568162998|ref|YP_008946298.1| - 3e-06 26.7 2.4 0.15 11.4 0.0 3.3 3 0 0 3 3 3 2 Alanine dehydrogenase/PNT, C-terminal domain FAD_binding_3 PF01494.19 gi|568162998|ref|YP_008946298.1| - 6e-06 25.7 1.8 0.034 13.4 0.2 2.3 2 0 0 2 2 2 2 FAD binding domain DAO PF01266.24 gi|568162998|ref|YP_008946298.1| - 0.00025 20.8 7.1 0.13 11.9 0.2 3.5 4 0 0 4 4 4 2 FAD dependent oxidoreductase UDPG_MGDP_dh_N PF03721.14 gi|568162998|ref|YP_008946298.1| - 0.0033 17.0 1.2 0.082 12.5 0.0 3.2 4 0 0 4 4 4 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Amino_oxidase PF01593.24 gi|568162998|ref|YP_008946298.1| - 0.053 12.8 0.4 4.2 6.6 0.0 3.1 4 0 0 4 4 4 0 Flavin containing amine oxidoreductase Thi4 PF01946.17 gi|568162998|ref|YP_008946298.1| - 0.055 12.7 0.3 0.36 10.0 0.1 2.3 2 0 0 2 2 2 0 Thi4 family Trp_halogenase PF04820.14 gi|568162998|ref|YP_008946298.1| - 0.17 10.7 0.6 5.3 5.8 0.0 2.2 2 0 0 2 2 2 0 Tryptophan halogenase Lycopene_cycl PF05834.12 gi|568162998|ref|YP_008946298.1| - 0.84 8.6 3.3 1.3 8.0 0.1 2.7 4 0 0 4 4 4 0 Lycopene cyclase protein ThiC_Rad_SAM PF01964.18 gi|568162999|ref|YP_008946299.1| - 1.6e-163 544.4 0.0 1.9e-163 544.2 0.0 1.0 1 0 0 1 1 1 1 Radical SAM ThiC family GTP_EFTU_D2 PF03144.25 gi|568163000|ref|YP_008946300.1| - 0.003 17.9 0.2 0.084 13.3 0.3 2.6 2 0 0 2 2 2 1 Elongation factor Tu domain 2 Arc_PepC_II PF06847.11 gi|568163001|ref|YP_008946301.1| - 1.2e-21 77.0 0.2 1.2e-21 77.0 0.2 2.6 3 0 0 3 3 3 1 Archaeal Peptidase A24 C-terminus Type II Peptidase_A24 PF01478.18 gi|568163001|ref|YP_008946301.1| - 7.6e-08 32.7 5.2 7.6e-08 32.7 5.2 1.8 2 1 0 2 2 2 1 Type IV leader peptidase family OSR1_C PF12202.8 gi|568163001|ref|YP_008946301.1| - 0.055 13.7 0.0 0.11 12.7 0.0 1.4 1 0 0 1 1 1 0 Oxidative-stress-responsive kinase 1 C-terminal domain DUF973 PF06157.11 gi|568164737|ref|YP_008946302.1| - 3.5e-55 187.2 31.4 3.6e-52 177.3 27.1 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF973) Sec62 PF03839.16 gi|568164737|ref|YP_008946302.1| - 1.4 8.3 3.2 2.8 7.4 3.2 1.4 1 0 0 1 1 1 0 Translocation protein Sec62 Creatininase PF02633.14 gi|568163002|ref|YP_008946303.1| - 1.4e-42 145.8 0.0 1.7e-42 145.6 0.0 1.0 1 0 0 1 1 1 1 Creatinine amidohydrolase CitMHS PF03600.16 gi|568163003|ref|YP_008946304.1| - 1.3e-32 113.2 34.7 1.3e-32 113.2 34.7 2.2 1 1 1 2 2 2 2 Citrate transporter Ecm33 PF12454.8 gi|568163003|ref|YP_008946304.1| - 0.18 12.0 0.2 0.44 10.7 0.2 1.7 1 0 0 1 1 1 0 GPI-anchored cell wall organization protein MFS_1 PF07690.16 gi|568163004|ref|YP_008946305.1| - 3.4e-19 69.0 27.6 4.1e-12 45.7 16.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily OppC_N PF12911.7 gi|568163004|ref|YP_008946305.1| - 0.73 9.9 5.5 11 6.1 0.0 4.0 4 0 0 4 4 4 0 N-terminal TM domain of oligopeptide transport permease C 4HBT PF03061.22 gi|568163005|ref|YP_008946306.1| - 9.7e-22 77.1 0.1 1.1e-10 41.7 0.0 2.2 2 0 0 2 2 2 2 Thioesterase superfamily 4HBT_2 PF13279.6 gi|568163005|ref|YP_008946306.1| - 2.5e-05 24.8 0.0 0.0011 19.5 0.0 2.2 1 1 0 1 1 1 1 Thioesterase-like superfamily Synuclein PF01387.17 gi|568163005|ref|YP_008946306.1| - 0.14 12.4 0.6 0.78 10.0 0.2 2.1 2 0 0 2 2 2 0 Synuclein V-ATPase_C PF03223.15 gi|568163006|ref|YP_008946307.1| - 0.024 14.0 0.1 0.024 14.0 0.1 1.1 1 0 0 1 1 1 0 V-ATPase subunit C DUF3885 PF13021.6 gi|568163006|ref|YP_008946307.1| - 0.15 12.2 0.4 13 6.0 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3885) DUF87 PF01935.17 gi|568163007|ref|YP_008946308.1| - 6.7e-16 59.1 4.4 2.5e-15 57.2 2.9 2.5 2 1 0 2 2 2 1 Helicase HerA, central domain DUF853 PF05872.12 gi|568163007|ref|YP_008946308.1| - 2.3e-08 33.1 0.0 0.0036 16.0 0.0 2.1 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) TrwB_AAD_bind PF10412.9 gi|568163007|ref|YP_008946308.1| - 4.6e-07 29.1 0.0 2.2e-06 26.8 0.0 1.9 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain AAA PF00004.29 gi|568163007|ref|YP_008946308.1| - 5.3e-05 23.6 0.5 0.021 15.2 0.1 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_10 PF12846.7 gi|568163007|ref|YP_008946308.1| - 0.00013 21.1 0.1 0.53 9.1 0.0 3.1 3 0 0 3 3 3 2 AAA-like domain AAA_22 PF13401.6 gi|568163007|ref|YP_008946308.1| - 0.0011 19.2 0.0 0.75 10.1 0.0 2.5 2 0 0 2 2 2 2 AAA domain ResIII PF04851.15 gi|568163007|ref|YP_008946308.1| - 0.0031 17.5 0.0 0.76 9.8 0.0 2.3 2 0 0 2 2 2 2 Type III restriction enzyme, res subunit FtsK_SpoIIIE PF01580.18 gi|568163007|ref|YP_008946308.1| - 0.0056 16.1 0.0 0.0098 15.3 0.0 1.3 1 0 0 1 1 1 1 FtsK/SpoIIIE family Zot PF05707.12 gi|568163007|ref|YP_008946308.1| - 0.16 11.6 0.0 0.35 10.5 0.0 1.5 1 0 0 1 1 1 0 Zonular occludens toxin (Zot) NurA PF09376.10 gi|568163008|ref|YP_008946309.1| - 2.8e-20 73.0 0.3 3.6e-20 72.7 0.3 1.1 1 0 0 1 1 1 1 NurA domain DUF5486 PF17588.2 gi|568163008|ref|YP_008946309.1| - 0.053 13.4 0.2 0.15 12.0 0.1 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5486) Pyr_redox_2 PF07992.14 gi|568163009|ref|YP_008946310.1| - 1.4e-44 152.5 0.2 1.7e-44 152.2 0.2 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|568163009|ref|YP_008946310.1| - 6.5e-18 65.0 0.0 1.5e-17 63.9 0.0 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 gi|568163009|ref|YP_008946310.1| - 7.4e-12 45.7 14.3 1.1e-11 45.1 1.9 3.9 5 0 0 5 5 3 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|568163009|ref|YP_008946310.1| - 1.5e-10 40.9 0.1 2e-08 33.9 0.1 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|568163009|ref|YP_008946310.1| - 7.6e-07 29.3 0.2 0.041 14.1 0.0 2.7 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 gi|568163009|ref|YP_008946310.1| - 4.7e-05 22.3 0.3 0.062 12.0 0.0 2.5 2 0 0 2 2 2 2 HI0933-like protein GIDA PF01134.22 gi|568163009|ref|YP_008946310.1| - 5.2e-05 22.5 0.1 0.085 11.9 0.0 2.4 2 0 0 2 2 2 2 Glucose inhibited division protein A NAD_binding_7 PF13241.6 gi|568163009|ref|YP_008946310.1| - 0.0008 19.8 0.2 0.085 13.3 0.1 2.5 2 0 0 2 2 2 1 Putative NAD(P)-binding FAD_binding_2 PF00890.24 gi|568163009|ref|YP_008946310.1| - 0.0011 18.2 1.9 0.36 9.9 0.0 2.6 3 0 0 3 3 3 2 FAD binding domain AlaDh_PNT_C PF01262.21 gi|568163009|ref|YP_008946310.1| - 0.0021 17.4 0.3 1.5 8.0 0.0 2.3 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain DAO PF01266.24 gi|568163009|ref|YP_008946310.1| - 0.01 15.5 6.4 0.21 11.1 0.9 3.3 2 2 1 3 3 3 0 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 gi|568163009|ref|YP_008946310.1| - 0.012 14.7 0.3 2.5 7.0 0.0 2.6 3 0 0 3 3 3 0 Lycopene cyclase protein NAD_binding_9 PF13454.6 gi|568163009|ref|YP_008946310.1| - 0.019 15.0 2.9 4.2 7.3 0.0 2.9 3 0 0 3 3 3 0 FAD-NAD(P)-binding K_oxygenase PF13434.6 gi|568163009|ref|YP_008946310.1| - 0.022 13.9 0.0 0.12 11.5 0.0 1.9 1 1 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) TrkA_N PF02254.18 gi|568163009|ref|YP_008946310.1| - 0.026 14.8 0.6 0.27 11.5 0.3 2.7 3 0 0 3 3 3 0 TrkA-N domain 3HCDH_N PF02737.18 gi|568163009|ref|YP_008946310.1| - 0.044 13.7 0.2 0.079 12.8 0.2 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Transposase_23 PF03017.14 gi|568163009|ref|YP_008946310.1| - 0.081 12.9 0.2 2.8 8.0 0.0 2.5 2 0 0 2 2 2 0 TNP1/EN/SPM transposase Mqo PF06039.15 gi|568163009|ref|YP_008946310.1| - 0.082 11.4 0.0 0.13 10.8 0.0 1.3 1 0 0 1 1 1 0 Malate:quinone oxidoreductase (Mqo) Thi4 PF01946.17 gi|568163009|ref|YP_008946310.1| - 0.17 11.1 3.4 0.73 9.0 0.0 2.6 3 0 0 3 3 3 0 Thi4 family Trp_halogenase PF04820.14 gi|568163009|ref|YP_008946310.1| - 0.18 10.6 0.2 0.43 9.4 0.0 1.6 2 0 0 2 2 2 0 Tryptophan halogenase FAD_binding_3 PF01494.19 gi|568163009|ref|YP_008946310.1| - 0.22 10.8 2.7 0.66 9.2 0.3 2.1 2 0 0 2 2 2 0 FAD binding domain ALMT PF11744.8 gi|568163010|ref|YP_008946311.1| - 0.036 12.9 0.2 0.056 12.3 0.2 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter bact-PGI_C PF10432.9 gi|568163011|ref|YP_008946312.1| - 1.5e-20 73.8 0.1 9.6e-20 71.2 0.1 2.1 1 1 0 1 1 1 1 Bacterial phospho-glucose isomerase C-terminal SIS domain SIS PF01380.22 gi|568163011|ref|YP_008946312.1| - 7.9e-07 29.0 0.7 1.1e-05 25.2 0.5 2.6 2 1 0 2 2 2 1 SIS domain PK_C PF02887.16 gi|568163011|ref|YP_008946312.1| - 0.028 14.7 0.5 0.59 10.4 0.0 2.7 2 1 1 3 3 3 0 Pyruvate kinase, alpha/beta domain tRNA-synt_1e PF01406.19 gi|568163012|ref|YP_008946313.1| - 1.3e-124 415.5 0.2 2.1e-124 414.8 0.2 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 gi|568163012|ref|YP_008946313.1| - 1.7e-16 59.9 1.8 7.1e-09 34.9 0.4 2.1 2 0 0 2 2 2 2 tRNA synthetases class I (M) DALR_2 PF09190.11 gi|568163012|ref|YP_008946313.1| - 5.7e-07 29.9 1.2 1.6e-05 25.3 0.5 2.7 3 0 0 3 3 3 1 DALR domain tRNA-synt_1 PF00133.22 gi|568163012|ref|YP_008946313.1| - 5.1e-06 25.0 1.0 0.0017 16.7 0.0 3.1 3 0 0 3 3 3 1 tRNA synthetases class I (I, L, M and V) tRNA-synt_1f PF01921.18 gi|568163012|ref|YP_008946313.1| - 0.00012 21.2 1.2 0.00036 19.6 0.2 2.1 2 0 0 2 2 2 1 tRNA synthetases class I (K) tRNA-synt_1c PF00749.21 gi|568163012|ref|YP_008946313.1| - 0.0039 16.1 2.5 0.02 13.8 0.1 2.9 3 0 0 3 3 3 1 tRNA synthetases class I (E and Q), catalytic domain Fib_alpha PF08702.10 gi|568163012|ref|YP_008946313.1| - 0.0086 16.3 2.8 0.95 9.6 1.6 2.3 2 0 0 2 2 2 1 Fibrinogen alpha/beta chain family RRF PF01765.19 gi|568163012|ref|YP_008946313.1| - 0.018 15.0 3.7 0.022 14.7 0.7 2.1 2 0 0 2 2 2 0 Ribosome recycling factor tRNA-synt_1d PF00750.19 gi|568163012|ref|YP_008946313.1| - 0.023 13.6 1.0 0.14 11.0 0.2 2.2 1 1 1 2 2 2 0 tRNA synthetases class I (R) TIP120 PF08623.10 gi|568163012|ref|YP_008946313.1| - 0.2 11.4 0.9 1.4 8.6 0.2 2.2 2 0 0 2 2 2 0 TATA-binding protein interacting (TIP20) NUDIX PF00293.28 gi|568163013|ref|YP_008946314.1| - 2.5e-19 69.6 0.0 3.1e-19 69.3 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 gi|568163013|ref|YP_008946314.1| - 0.084 12.9 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 NUDIX domain ELFV_dehydrog PF00208.21 gi|568163014|ref|YP_008946316.1| - 1e-66 225.1 3.8 1.4e-66 224.7 3.8 1.2 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.18 gi|568163014|ref|YP_008946316.1| - 3.2e-54 182.3 0.0 8.6e-54 180.9 0.0 1.8 2 0 0 2 2 2 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 2-Hacid_dh_C PF02826.19 gi|568163014|ref|YP_008946316.1| - 0.0028 17.0 0.5 0.005 16.2 0.5 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Bac_GDH PF05088.12 gi|568163014|ref|YP_008946316.1| - 0.031 11.8 0.1 0.043 11.3 0.1 1.1 1 0 0 1 1 1 0 Bacterial NAD-glutamate dehydrogenase AlaDh_PNT_C PF01262.21 gi|568163014|ref|YP_008946316.1| - 0.038 13.3 2.7 0.058 12.7 1.7 1.9 1 1 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain AdoHcyase_NAD PF00670.21 gi|568163014|ref|YP_008946316.1| - 0.074 13.1 1.1 0.18 11.8 1.1 1.7 1 1 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DUF131 PF01998.17 gi|568163015|ref|YP_008946317.1| - 9.8e-23 79.6 3.4 9.8e-23 79.6 3.4 2.1 1 1 1 2 2 2 1 Protein of unknown function DUF131 OAD_gamma PF04277.13 gi|568163015|ref|YP_008946317.1| - 0.0026 18.3 0.2 0.0026 18.3 0.2 2.2 2 0 0 2 2 1 1 Oxaloacetate decarboxylase, gamma chain MpPF26 PF07666.11 gi|568163015|ref|YP_008946317.1| - 0.0042 17.2 5.8 0.0057 16.8 5.7 1.2 1 1 0 1 1 1 1 M penetrans paralogue family 26 DUF5305 PF17231.2 gi|568163015|ref|YP_008946317.1| - 0.0058 16.1 0.1 0.0058 16.1 0.1 2.0 1 1 1 2 2 2 1 Family of unknown function (DUF5305) HemY_N PF07219.13 gi|568163015|ref|YP_008946317.1| - 0.03 14.5 1.0 1.4 9.2 0.0 2.1 2 0 0 2 2 2 0 HemY protein N-terminus Baculo_11_kDa PF06143.11 gi|568163015|ref|YP_008946317.1| - 0.04 13.5 6.5 0.92 9.1 0.0 2.1 2 0 0 2 2 2 0 Baculovirus 11 kDa family Neurensin PF14927.6 gi|568163015|ref|YP_008946317.1| - 0.048 13.4 3.8 3 7.6 0.0 2.1 2 0 0 2 2 2 0 Neurensin DUF898 PF05987.13 gi|568163015|ref|YP_008946317.1| - 0.052 12.6 0.6 0.06 12.4 0.6 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF898) DUF4190 PF13828.6 gi|568163015|ref|YP_008946317.1| - 0.066 13.0 12.7 0.5 10.2 0.1 3.0 2 1 0 2 2 2 0 Domain of unknown function (DUF4190) GRP PF07172.11 gi|568163015|ref|YP_008946317.1| - 0.069 13.9 3.1 0.21 12.3 0.0 2.0 2 0 0 2 2 2 0 Glycine rich protein family Saf_2TM PF18303.1 gi|568163015|ref|YP_008946317.1| - 0.1 12.2 8.1 0.11 12.1 0.4 2.0 1 1 1 2 2 2 0 SAVED-fused 2TM effector domain TMEM100 PF16311.5 gi|568163015|ref|YP_008946317.1| - 0.11 12.1 0.8 0.32 10.6 0.0 1.9 2 0 0 2 2 2 0 Transmembrane protein 100 DUF2207 PF09972.9 gi|568163015|ref|YP_008946317.1| - 0.15 10.8 4.0 0.18 10.5 4.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF3899 PF13038.6 gi|568163015|ref|YP_008946317.1| - 0.23 12.0 8.4 7.6 7.1 8.4 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF3899) TMEM51 PF15345.6 gi|568163015|ref|YP_008946317.1| - 0.25 11.1 5.1 0.6 9.9 4.9 1.7 1 1 0 1 1 1 0 Transmembrane protein 51 FtsX PF02687.21 gi|568163015|ref|YP_008946317.1| - 0.25 11.8 8.8 0.48 10.9 8.8 1.5 1 1 0 1 1 1 0 FtsX-like permease family EphA2_TM PF14575.6 gi|568163015|ref|YP_008946317.1| - 0.35 11.8 0.0 0.35 11.8 0.0 2.1 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain DUF3784 PF12650.7 gi|568163015|ref|YP_008946317.1| - 0.43 10.8 12.9 2.6 8.3 12.4 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF3784) Pox_A14 PF05767.12 gi|568163015|ref|YP_008946317.1| - 0.44 10.7 9.6 0.14 12.4 0.4 2.2 1 1 1 2 2 2 0 Poxvirus virion envelope protein A14 Sigma_reg_N PF13800.6 gi|568163015|ref|YP_008946317.1| - 0.53 10.6 7.6 2.6 8.4 0.1 2.1 2 0 0 2 2 2 0 Sigma factor regulator N-terminal DUF4834 PF16118.5 gi|568163015|ref|YP_008946317.1| - 0.6 11.1 0.1 0.6 11.1 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4834) CRPA PF05745.11 gi|568163015|ref|YP_008946317.1| - 0.8 9.7 6.8 0.81 9.7 0.3 2.1 2 0 0 2 2 2 0 Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA) TarH PF02203.15 gi|568163015|ref|YP_008946317.1| - 0.82 9.6 0.0 0.82 9.6 0.0 1.9 2 0 0 2 2 1 0 Tar ligand binding domain homologue DUF2371 PF10177.9 gi|568163015|ref|YP_008946317.1| - 0.94 9.6 10.0 8.3 6.6 9.1 2.0 1 1 0 1 1 1 0 Uncharacterised conserved protein (DUF2371) DUF4736 PF15883.5 gi|568163015|ref|YP_008946317.1| - 1.2 8.8 3.4 23 4.7 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4736) Phage_holin_3_6 PF07332.11 gi|568163015|ref|YP_008946317.1| - 1.9 8.6 7.6 4.3 7.4 0.1 2.0 1 1 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III SdpI PF13630.6 gi|568163015|ref|YP_008946317.1| - 2.2 8.5 10.0 1.1 9.4 0.6 2.2 2 0 0 2 2 2 0 SdpI/YhfL protein family DUF2681 PF10883.8 gi|568163015|ref|YP_008946317.1| - 2.4 8.6 5.1 9.5 6.7 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2681) Tetraspanin PF00335.20 gi|568163015|ref|YP_008946317.1| - 3 7.5 6.9 9.6 5.8 6.9 1.7 1 1 0 1 1 1 0 Tetraspanin family DUF2970 PF11174.8 gi|568163015|ref|YP_008946317.1| - 3.1 7.7 13.8 7.8 6.4 5.2 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF2970) Prominin PF05478.11 gi|568163015|ref|YP_008946317.1| - 3.3 5.6 5.0 15 3.4 5.0 1.8 1 1 0 1 1 1 0 Prominin DUF515 PF04415.12 gi|568163015|ref|YP_008946317.1| - 3.4 5.9 8.8 3.6 5.9 0.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF515) DUF4083 PF13314.6 gi|568163015|ref|YP_008946317.1| - 4.8 7.2 13.2 3.4 7.7 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4083) ECSCR PF15820.5 gi|568163015|ref|YP_008946317.1| - 9.1 6.2 12.7 0.14 12.0 0.5 2.1 1 1 0 2 2 2 0 Endothelial cell-specific chemotaxis regulator AAA_15 PF13175.6 gi|568163016|ref|YP_008946318.1| - 7.4e-27 95.0 8.9 2.9e-15 56.8 0.0 2.8 2 1 1 3 3 3 2 AAA ATPase domain AAA_21 PF13304.6 gi|568163016|ref|YP_008946318.1| - 4.7e-20 72.6 1.4 3.8e-14 53.2 0.0 2.6 2 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|568163016|ref|YP_008946318.1| - 1.9e-08 34.0 0.9 2.8e-07 30.2 0.9 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|568163016|ref|YP_008946318.1| - 2.7e-07 31.3 0.7 2.7e-07 31.3 0.7 1.8 2 0 0 2 2 2 1 AAA domain ABC_tran PF00005.27 gi|568163016|ref|YP_008946318.1| - 0.015 15.8 0.4 0.4 11.2 0.4 2.7 2 1 0 2 2 2 0 ABC transporter UTP15_C PF09384.10 gi|568163016|ref|YP_008946318.1| - 0.057 13.1 0.0 0.1 12.2 0.0 1.4 1 0 0 1 1 1 0 UTP15 C terminal DUF2813 PF11398.8 gi|568163016|ref|YP_008946318.1| - 0.1 11.8 0.3 1.5 8.0 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2813) adh_short_C2 PF13561.6 gi|568163017|ref|YP_008946319.1| - 9.2e-47 159.5 0.0 1.5e-46 158.9 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|568163017|ref|YP_008946319.1| - 2.3e-30 105.5 0.0 2.9e-30 105.2 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|568163017|ref|YP_008946319.1| - 0.00018 21.5 0.0 0.0003 20.7 0.0 1.3 1 0 0 1 1 1 1 KR domain THF_DHG_CYH_C PF02882.19 gi|568163017|ref|YP_008946319.1| - 0.073 12.4 0.0 0.12 11.7 0.0 1.4 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TA_inhibitor PF17574.2 gi|568163017|ref|YP_008946319.1| - 0.076 13.0 0.0 0.17 11.9 0.0 1.6 1 0 0 1 1 1 0 Inhibitor of toxin/antitoxin system (Gp4.5) UDG PF03167.19 gi|568163018|ref|YP_008946320.1| - 1.3e-47 161.7 0.0 1.6e-47 161.3 0.0 1.1 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily Baculo_LEF5_C PF11792.8 gi|568163018|ref|YP_008946320.1| - 0.32 10.7 1.6 0.33 10.7 0.2 1.8 2 0 0 2 2 2 0 Baculoviridae late expression factor 5 C-terminal domain Imm48 PF15574.6 gi|568163019|ref|YP_008946321.1| - 0.018 14.8 0.0 0.023 14.4 0.0 1.2 1 0 0 1 1 1 0 Immunity protein 48 PAP_assoc PF03828.19 gi|568163019|ref|YP_008946321.1| - 0.039 14.2 0.1 0.097 12.9 0.1 1.7 1 1 0 1 1 1 0 Cid1 family poly A polymerase Terminase_5 PF06056.12 gi|568163019|ref|YP_008946321.1| - 0.12 12.3 0.1 0.3 11.0 0.1 1.6 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) Fe_dep_repr_C PF02742.15 gi|568163020|ref|YP_008946322.1| - 2.2e-19 69.3 0.0 3.6e-19 68.6 0.0 1.3 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain DUF4423 PF14394.6 gi|568163020|ref|YP_008946322.1| - 1e-05 25.3 0.0 1.3e-05 25.0 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) Fe_dep_repress PF01325.19 gi|568163020|ref|YP_008946322.1| - 1.1e-05 25.5 0.0 1.7e-05 24.9 0.0 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_45 PF14947.6 gi|568163020|ref|YP_008946322.1| - 0.00011 22.1 0.0 0.00016 21.6 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix MarR PF01047.22 gi|568163020|ref|YP_008946322.1| - 0.00021 21.1 0.0 0.0004 20.3 0.0 1.4 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|568163020|ref|YP_008946322.1| - 0.0004 20.2 0.0 0.0015 18.4 0.0 1.9 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB LexA_DNA_bind PF01726.16 gi|568163020|ref|YP_008946322.1| - 0.00089 19.0 0.0 0.0018 18.0 0.0 1.6 2 0 0 2 2 1 1 LexA DNA binding domain MarR_2 PF12802.7 gi|568163020|ref|YP_008946322.1| - 0.0017 18.2 0.0 0.0035 17.2 0.0 1.5 1 0 0 1 1 1 1 MarR family FeoC PF09012.10 gi|568163020|ref|YP_008946322.1| - 0.0019 18.2 0.0 0.0033 17.4 0.0 1.4 1 0 0 1 1 1 1 FeoC like transcriptional regulator HTH_IclR PF09339.10 gi|568163020|ref|YP_008946322.1| - 0.0022 17.7 0.0 0.015 15.1 0.0 2.0 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_27 PF13463.6 gi|568163020|ref|YP_008946322.1| - 0.018 15.5 0.0 0.092 13.3 0.0 2.0 1 1 1 2 2 2 0 Winged helix DNA-binding domain Ribosomal_S19e PF01090.19 gi|568163020|ref|YP_008946322.1| - 0.031 14.0 0.0 0.047 13.4 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein S19e PI-TkoII_IV PF18714.1 gi|568163020|ref|YP_008946322.1| - 0.033 13.7 0.1 0.035 13.6 0.1 1.2 1 0 0 1 1 1 0 DNA polymerase II intein Domain IV HTH_12 PF08461.10 gi|568163020|ref|YP_008946322.1| - 0.035 14.1 0.0 0.068 13.1 0.0 1.5 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain Rrf2 PF02082.20 gi|568163020|ref|YP_008946322.1| - 0.048 14.0 0.0 0.13 12.6 0.0 1.7 2 0 0 2 2 2 0 Transcriptional regulator IF2_N PF04760.15 gi|568163020|ref|YP_008946322.1| - 0.065 13.1 0.2 4.1 7.3 0.0 3.0 2 1 1 3 3 3 0 Translation initiation factor IF-2, N-terminal region HTH_Crp_2 PF13545.6 gi|568163020|ref|YP_008946322.1| - 0.16 12.0 0.0 0.37 10.8 0.0 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain FtsK_gamma PF09397.10 gi|568163020|ref|YP_008946322.1| - 0.16 11.8 0.0 0.53 10.1 0.0 1.8 2 0 0 2 2 2 0 Ftsk gamma domain DHDPS PF00701.22 gi|568163021|ref|YP_008946323.1| - 1.6e-53 181.3 0.0 1.9e-53 181.1 0.0 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family P53_tetramer PF07710.11 gi|568163021|ref|YP_008946323.1| - 0.38 10.1 0.1 0.38 10.1 0.1 2.1 2 0 0 2 2 2 0 P53 tetramerisation motif HTH_20 PF12840.7 gi|568163022|ref|YP_008946324.1| - 3.6e-06 26.9 0.0 5.9e-06 26.3 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|568163022|ref|YP_008946324.1| - 1.5e-05 24.8 0.0 2.2e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 MarR family LexA_DNA_bind PF01726.16 gi|568163022|ref|YP_008946324.1| - 0.0001 22.0 0.0 0.0002 21.1 0.0 1.4 1 0 0 1 1 1 1 LexA DNA binding domain HTH_24 PF13412.6 gi|568163022|ref|YP_008946324.1| - 0.00029 20.4 0.0 0.00075 19.0 0.0 1.7 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_27 PF13463.6 gi|568163022|ref|YP_008946324.1| - 0.00029 21.3 0.0 0.00046 20.6 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_5 PF01022.20 gi|568163022|ref|YP_008946324.1| - 0.0033 17.3 0.0 0.0055 16.6 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|568163022|ref|YP_008946324.1| - 0.0035 17.2 0.3 0.005 16.7 0.3 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.12 gi|568163022|ref|YP_008946324.1| - 0.004 17.1 0.2 0.0083 16.1 0.0 1.6 2 0 0 2 2 2 1 HTH domain HTH_12 PF08461.10 gi|568163022|ref|YP_008946324.1| - 0.076 13.0 0.0 0.22 11.5 0.0 1.8 2 0 0 2 2 2 0 Ribonuclease R winged-helix domain HTH_28 PF13518.6 gi|568163022|ref|YP_008946324.1| - 0.18 11.9 0.0 0.3 11.3 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain AAA_18 PF13238.6 gi|568164739|ref|YP_008946325.1| - 0.00048 20.7 0.0 0.0019 18.8 0.0 2.1 1 0 0 1 1 1 1 AAA domain AAA_14 PF13173.6 gi|568164739|ref|YP_008946325.1| - 0.095 12.7 2.0 0.21 11.6 0.1 2.7 2 0 0 2 2 2 0 AAA domain DUF1878 PF08963.10 gi|568164739|ref|YP_008946325.1| - 0.74 10.3 5.1 0.48 10.9 0.8 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF1878) Aldedh PF00171.22 gi|568163023|ref|YP_008946327.1| - 1.4e-134 449.1 0.0 1.9e-134 448.6 0.0 1.1 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 gi|568163023|ref|YP_008946327.1| - 2.2e-05 23.7 0.0 0.00023 20.4 0.0 2.1 1 1 0 1 1 1 1 Acyl-CoA reductase (LuxC) Med28 PF11594.8 gi|568163023|ref|YP_008946327.1| - 0.17 12.0 0.0 0.37 10.9 0.0 1.6 1 0 0 1 1 1 0 Mediator complex subunit 28 BNR_4 PF15892.5 gi|568164741|ref|YP_008946328.1| - 0.019 14.3 0.5 0.03 13.7 0.5 1.3 1 0 0 1 1 1 0 BNR repeat-containing family member CoA_binding_2 PF13380.6 gi|568163024|ref|YP_008946329.1| - 4.6e-37 127.1 0.1 5.4e-37 126.8 0.1 1.1 1 0 0 1 1 1 1 CoA binding domain CoA_binding PF02629.19 gi|568163024|ref|YP_008946329.1| - 0.00088 19.9 0.0 0.0013 19.3 0.0 1.3 1 0 0 1 1 1 1 CoA binding domain p450 PF00067.22 gi|568163024|ref|YP_008946329.1| - 0.14 10.9 0.0 0.18 10.5 0.0 1.1 1 0 0 1 1 1 0 Cytochrome P450 DUF308 PF03729.13 gi|568164742|ref|YP_008946330.1| - 0.0062 16.8 3.2 0.0083 16.4 3.2 1.2 1 0 0 1 1 1 1 Short repeat of unknown function (DUF308) TFIIS_C PF01096.18 gi|568163025|ref|YP_008946331.1| - 1.8e-24 85.3 11.1 3.5e-22 78.0 1.7 3.2 3 0 0 3 3 3 2 Transcription factor S-II (TFIIS) RNA_POL_M_15KD PF02150.16 gi|568163025|ref|YP_008946331.1| - 2e-10 40.3 3.0 2e-10 40.3 3.0 3.2 2 1 0 2 2 2 1 RNA polymerases M/15 Kd subunit Zn_Tnp_IS1595 PF12760.7 gi|568163025|ref|YP_008946331.1| - 7e-08 32.3 11.7 0.0013 18.7 2.4 2.4 2 1 0 2 2 2 2 Transposase zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|568163025|ref|YP_008946331.1| - 2.3e-06 27.0 6.2 0.022 14.3 0.2 2.9 2 2 0 2 2 2 2 TFIIB zinc-binding DUF2387 PF09526.10 gi|568163025|ref|YP_008946331.1| - 3.9e-06 26.9 6.8 9e-05 22.6 1.1 2.2 1 1 1 2 2 2 1 Probable metal-binding protein (DUF2387) zf-ribbon_3 PF13248.6 gi|568163025|ref|YP_008946331.1| - 4.5e-05 22.7 13.9 0.21 11.0 0.1 4.3 4 0 0 4 4 4 2 zinc-ribbon domain DZR PF12773.7 gi|568163025|ref|YP_008946331.1| - 0.00015 21.7 10.2 0.0022 18.0 1.5 2.8 2 1 1 3 3 3 1 Double zinc ribbon Lar_restr_allev PF14354.6 gi|568163025|ref|YP_008946331.1| - 0.00022 21.5 6.2 0.012 16.0 0.8 2.4 2 0 0 2 2 2 2 Restriction alleviation protein Lar Nudix_N_2 PF14803.6 gi|568163025|ref|YP_008946331.1| - 0.00026 20.8 11.6 0.0017 18.2 1.7 3.5 2 2 0 2 2 2 1 Nudix N-terminal OrfB_Zn_ribbon PF07282.11 gi|568163025|ref|YP_008946331.1| - 0.0006 19.7 10.1 0.066 13.1 1.9 2.9 1 1 1 2 2 2 2 Putative transposase DNA-binding domain zinc_ribbon_4 PF13717.6 gi|568163025|ref|YP_008946331.1| - 0.0012 18.7 12.7 0.32 10.9 0.4 4.3 4 0 0 4 4 4 1 zinc-ribbon domain DUF35_N PF12172.8 gi|568163025|ref|YP_008946331.1| - 0.002 18.0 8.3 6.2 6.8 0.1 4.1 4 0 0 4 4 4 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Zn-ribbon_8 PF09723.10 gi|568163025|ref|YP_008946331.1| - 0.0026 17.8 15.0 5.8 7.1 0.6 4.4 4 1 1 5 5 5 0 Zinc ribbon domain YhfH PF14149.6 gi|568163025|ref|YP_008946331.1| - 0.0031 17.5 12.1 0.76 9.8 0.2 4.1 4 0 0 4 4 4 1 YhfH-like protein zinc_ribbon_2 PF13240.6 gi|568163025|ref|YP_008946331.1| - 0.0039 16.8 23.8 0.097 12.4 0.2 4.6 5 0 0 5 5 4 1 zinc-ribbon domain Zn_ribbon_recom PF13408.6 gi|568163025|ref|YP_008946331.1| - 0.0049 17.4 1.9 0.0049 17.4 1.9 2.5 2 1 0 2 2 2 1 Recombinase zinc beta ribbon domain zf-TFIIB PF13453.6 gi|568163025|ref|YP_008946331.1| - 0.0049 16.2 1.8 0.0049 16.2 1.8 2.9 2 1 0 2 2 2 1 Transcription factor zinc-finger zf-NADH-PPase PF09297.11 gi|568163025|ref|YP_008946331.1| - 0.0052 16.4 10.5 0.066 12.9 0.2 3.8 4 0 0 4 4 4 1 NADH pyrophosphatase zinc ribbon domain DpnI PF06044.12 gi|568163025|ref|YP_008946331.1| - 0.0087 15.7 2.8 0.18 11.4 0.4 2.1 2 0 0 2 2 2 1 Dam-replacing family C1_1 PF00130.22 gi|568163025|ref|YP_008946331.1| - 0.0096 15.8 1.2 0.0096 15.8 1.2 2.8 2 1 1 3 3 3 1 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-tcix PF14952.6 gi|568163025|ref|YP_008946331.1| - 0.0098 15.5 13.9 4.6 6.9 0.1 4.2 4 0 0 4 4 4 0 Putative treble-clef, zinc-finger, Zn-binding Terminase_GpA PF05876.12 gi|568163025|ref|YP_008946331.1| - 0.014 14.0 6.3 0.33 9.4 0.7 2.1 1 1 1 2 2 2 0 Phage terminase large subunit (GpA) zinc_ribbon_10 PF10058.9 gi|568163025|ref|YP_008946331.1| - 0.025 14.3 9.3 0.33 10.7 2.6 3.4 3 1 0 3 3 3 0 Predicted integral membrane zinc-ribbon metal-binding protein eIF-5_eIF-2B PF01873.17 gi|568163025|ref|YP_008946331.1| - 0.033 14.1 6.3 0.68 9.8 0.1 2.5 1 1 1 3 3 3 0 Domain found in IF2B/IF5 IBR PF01485.21 gi|568163025|ref|YP_008946331.1| - 0.033 14.4 11.0 0.073 13.3 2.0 3.0 2 1 0 2 2 2 0 IBR domain, a half RING-finger domain Baculo_LEF5_C PF11792.8 gi|568163025|ref|YP_008946331.1| - 0.039 13.6 0.2 0.039 13.6 0.2 3.2 3 1 0 3 3 3 0 Baculoviridae late expression factor 5 C-terminal domain DNA_ligase_ZBD PF03119.16 gi|568163025|ref|YP_008946331.1| - 0.039 14.0 7.0 0.15 12.1 0.5 2.8 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain zf-UBP PF02148.19 gi|568163025|ref|YP_008946331.1| - 0.048 14.0 3.0 0.72 10.2 0.5 2.5 1 1 1 2 2 2 0 Zn-finger in ubiquitin-hydrolases and other protein PhnA_Zn_Ribbon PF08274.12 gi|568163025|ref|YP_008946331.1| - 0.052 13.5 5.1 14 5.8 0.3 3.5 3 1 0 3 3 3 0 PhnA Zinc-Ribbon zinc_ribbon_5 PF13719.6 gi|568163025|ref|YP_008946331.1| - 0.079 12.7 14.3 0.94 9.3 2.4 3.9 3 1 0 3 3 3 0 zinc-ribbon domain zf-H2C2_2 PF13465.6 gi|568163025|ref|YP_008946331.1| - 0.091 13.2 14.9 1 9.9 0.6 4.1 4 0 0 4 4 4 0 Zinc-finger double domain GFA PF04828.14 gi|568163025|ref|YP_008946331.1| - 0.098 13.0 9.5 0.17 12.2 1.3 3.2 1 1 2 3 3 3 0 Glutathione-dependent formaldehyde-activating enzyme DUF2752 PF10825.8 gi|568163025|ref|YP_008946331.1| - 0.18 11.9 0.0 0.18 11.9 0.0 3.1 4 0 0 4 4 3 0 Protein of unknown function (DUF2752) zf_UBZ PF18439.1 gi|568163025|ref|YP_008946331.1| - 0.19 11.3 12.8 3.7 7.2 0.1 4.1 4 0 0 4 4 4 0 Ubiquitin-Binding Zinc Finger HalOD2 PF18547.1 gi|568163025|ref|YP_008946331.1| - 0.19 11.6 9.9 3.6 7.6 0.2 3.7 3 1 1 4 4 4 0 Halobacterial output domain 2 zinc-ribbons_6 PF07191.12 gi|568163025|ref|YP_008946331.1| - 0.23 11.5 8.9 0.34 10.9 1.0 2.8 2 1 0 2 2 2 0 zinc-ribbons Ribosomal_S27e PF01667.17 gi|568163025|ref|YP_008946331.1| - 0.26 11.0 9.6 3 7.6 1.0 3.8 2 2 0 2 2 2 0 Ribosomal protein S27 DUF3268 PF11672.8 gi|568163025|ref|YP_008946331.1| - 0.3 11.4 7.4 3.2 8.1 1.8 2.5 2 1 0 2 2 2 0 zinc-finger-containing domain Zn_Tnp_IS91 PF14319.6 gi|568163025|ref|YP_008946331.1| - 0.4 10.7 11.7 8.6 6.5 0.0 4.0 2 2 2 4 4 4 0 Transposase zinc-binding domain Rubredoxin_2 PF18073.1 gi|568163025|ref|YP_008946331.1| - 0.43 10.3 15.7 2 8.2 0.3 4.2 4 0 0 4 4 4 0 Rubredoxin metal binding domain HypA PF01155.19 gi|568163025|ref|YP_008946331.1| - 0.48 10.5 9.4 0.4 10.7 0.8 2.9 1 1 2 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Rubredoxin PF00301.20 gi|568163025|ref|YP_008946331.1| - 0.57 10.3 12.3 4.7 7.3 0.2 4.1 4 0 0 4 4 4 0 Rubredoxin DUF2310 PF10071.9 gi|568163025|ref|YP_008946331.1| - 0.61 9.3 3.6 0.32 10.2 0.2 1.9 2 0 0 2 2 2 0 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) UPF0547 PF10571.9 gi|568163025|ref|YP_008946331.1| - 0.61 10.2 16.6 2.9 8.1 0.1 4.2 4 0 0 4 4 4 0 Uncharacterised protein family UPF0547 Zn_Tnp_IS1 PF03811.13 gi|568163025|ref|YP_008946331.1| - 0.76 9.6 0.0 0.76 9.6 0.0 3.5 3 1 0 3 3 3 0 InsA N-terminal domain Desulfoferrod_N PF06397.12 gi|568163025|ref|YP_008946331.1| - 0.84 9.3 15.2 0.55 9.9 0.6 3.4 4 0 0 4 4 3 0 Desulfoferrodoxin, N-terminal domain zf-C4_Topoisom PF01396.19 gi|568163025|ref|YP_008946331.1| - 0.87 9.4 16.9 0.75 9.6 5.0 3.4 3 1 0 3 3 3 0 Topoisomerase DNA binding C4 zinc finger Ribosomal_L32p PF01783.23 gi|568163025|ref|YP_008946331.1| - 0.87 9.9 6.4 5.5 7.3 1.7 3.7 3 1 0 3 3 3 0 Ribosomal L32p protein family zf-ACC PF17848.1 gi|568163025|ref|YP_008946331.1| - 0.93 9.6 18.8 7.8 6.7 0.9 4.2 4 0 0 4 4 4 0 Acetyl-coA carboxylase zinc finger domain RecR PF02132.15 gi|568163025|ref|YP_008946331.1| - 0.95 9.1 9.3 4 7.1 0.2 3.8 4 0 0 4 4 4 0 RecR protein zf-ISL3 PF14690.6 gi|568163025|ref|YP_008946331.1| - 1 10.1 12.6 31 5.3 0.1 4.0 3 1 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf-HIT PF04438.16 gi|568163025|ref|YP_008946331.1| - 1.1 9.2 16.3 5.1 7.1 0.9 4.1 4 0 0 4 4 4 0 HIT zinc finger zinc_ribbon_13 PF09855.9 gi|568163025|ref|YP_008946331.1| - 1.4 9.1 11.7 6.5 7.0 0.6 4.0 3 1 1 4 4 4 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) Ribosomal_L37ae PF01780.19 gi|568163025|ref|YP_008946331.1| - 1.6 8.9 11.7 0.56 10.3 1.6 3.0 1 1 2 3 3 3 0 Ribosomal L37ae protein family zf-Mss51 PF13824.6 gi|568163025|ref|YP_008946331.1| - 1.6 8.9 12.4 5.4 7.2 1.8 3.1 1 1 2 3 3 3 0 Zinc-finger of mitochondrial splicing suppressor 51 NOB1_Zn_bind PF08772.11 gi|568163025|ref|YP_008946331.1| - 1.7 8.9 13.5 0.88 9.8 0.3 3.9 2 1 1 4 4 4 0 Nin one binding (NOB1) Zn-ribbon like A2L_zn_ribbon PF08792.10 gi|568163025|ref|YP_008946331.1| - 1.9 8.3 15.0 14 5.5 0.2 4.2 4 0 0 4 4 4 0 A2L zinc ribbon domain DUF3797 PF12677.7 gi|568163025|ref|YP_008946331.1| - 2.2 8.2 0.1 2.2 8.2 0.1 3.9 3 1 1 4 4 4 0 Domain of unknown function (DUF3797) Rpr2 PF04032.16 gi|568163025|ref|YP_008946331.1| - 3.1 8.2 10.3 58 4.1 10.3 2.9 1 1 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain zf-RING_7 PF02591.15 gi|568163025|ref|YP_008946331.1| - 3.2 8.0 6.9 44 4.4 0.1 3.6 4 0 0 4 4 3 0 C4-type zinc ribbon domain RNHCP PF12647.7 gi|568163025|ref|YP_008946331.1| - 3.6 7.6 9.7 2.4 8.2 1.4 3.0 2 2 0 2 2 2 0 RNHCP domain FdhE PF04216.12 gi|568163025|ref|YP_008946331.1| - 5.6 6.7 8.1 0.42 10.4 0.3 2.2 1 1 1 2 2 2 0 Protein involved in formate dehydrogenase formation DNA_RNApol_7kD PF03604.13 gi|568163025|ref|YP_008946331.1| - 6.8 6.5 13.1 26 4.6 0.1 4.0 4 0 0 4 4 4 0 DNA directed RNA polymerase, 7 kDa subunit zinc_ribbon_15 PF17032.5 gi|568163025|ref|YP_008946331.1| - 9.6 7.0 15.0 1.6e+02 3.1 1.1 3.2 1 1 1 2 2 1 0 zinc-ribbon family RNA_pol_L_2 PF13656.6 gi|568163026|ref|YP_008946333.1| - 1e-22 79.7 0.0 1.2e-22 79.4 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L PF01193.24 gi|568163026|ref|YP_008946333.1| - 2.6e-10 39.6 0.0 3.8e-10 39.1 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain ECR1_N PF14382.6 gi|568163027|ref|YP_008946334.1| - 3.4e-09 36.3 0.1 7.7e-09 35.2 0.1 1.6 1 0 0 1 1 1 1 Exosome complex exonuclease RRP4 N-terminal region OrfB_Zn_ribbon PF07282.11 gi|568163027|ref|YP_008946334.1| - 0.0011 18.8 0.5 0.0021 17.9 0.5 1.4 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HypA PF01155.19 gi|568163027|ref|YP_008946334.1| - 0.0077 16.2 0.0 0.013 15.5 0.0 1.4 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn-ribbon_8 PF09723.10 gi|568163027|ref|YP_008946334.1| - 0.011 15.9 2.7 0.04 14.0 2.7 1.9 1 1 0 1 1 1 0 Zinc ribbon domain zf-ribbon_3 PF13248.6 gi|568163027|ref|YP_008946334.1| - 0.011 15.1 4.6 0.21 11.1 5.2 2.1 1 1 1 2 2 2 0 zinc-ribbon domain DZR PF12773.7 gi|568163027|ref|YP_008946334.1| - 0.011 15.7 0.3 0.018 15.1 0.3 1.2 1 0 0 1 1 1 0 Double zinc ribbon A2L_zn_ribbon PF08792.10 gi|568163027|ref|YP_008946334.1| - 0.014 15.1 0.9 0.03 14.1 0.9 1.5 1 0 0 1 1 1 0 A2L zinc ribbon domain EXOSC1 PF10447.9 gi|568163027|ref|YP_008946334.1| - 0.024 15.2 1.0 1.8 9.2 0.1 2.3 1 1 1 2 2 2 0 Exosome component EXOSC1/CSL4 zf-NADH-PPase PF09297.11 gi|568163027|ref|YP_008946334.1| - 0.029 14.0 1.2 0.052 13.2 1.2 1.4 1 0 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain TF_Zn_Ribbon PF08271.12 gi|568163027|ref|YP_008946334.1| - 0.029 13.9 0.5 0.069 12.7 0.5 1.6 1 0 0 1 1 1 0 TFIIB zinc-binding Auto_anti-p27 PF06677.12 gi|568163027|ref|YP_008946334.1| - 0.031 14.4 1.2 0.073 13.2 1.2 1.6 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Prok-RING_1 PF14446.6 gi|568163027|ref|YP_008946334.1| - 0.032 14.2 1.2 0.052 13.5 1.2 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 S1 PF00575.23 gi|568163027|ref|YP_008946334.1| - 0.048 14.0 0.1 0.18 12.1 0.1 2.0 1 1 0 1 1 1 0 S1 RNA binding domain NOB1_Zn_bind PF08772.11 gi|568163027|ref|YP_008946334.1| - 0.058 13.6 0.2 0.11 12.6 0.2 1.5 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like CDC24_OB3 PF17244.2 gi|568163027|ref|YP_008946334.1| - 0.11 12.2 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 3 C1_1 PF00130.22 gi|568163027|ref|YP_008946334.1| - 0.13 12.1 0.4 0.21 11.5 0.4 1.2 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) TYW3 PF02676.14 gi|568163027|ref|YP_008946334.1| - 0.16 11.3 0.1 0.2 11.0 0.1 1.1 1 0 0 1 1 1 0 Methyltransferase TYW3 DNA_RNApol_7kD PF03604.13 gi|568163027|ref|YP_008946334.1| - 0.18 11.5 3.0 0.42 10.3 3.0 1.6 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit DNA_ligase_ZBD PF03119.16 gi|568163027|ref|YP_008946334.1| - 0.59 10.2 4.0 4.4 7.4 0.2 2.3 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain zinc_ribbon_2 PF13240.6 gi|568163027|ref|YP_008946334.1| - 0.76 9.6 4.1 15 5.4 0.9 2.2 1 1 0 1 1 1 0 zinc-ribbon domain Diphthamide_syn PF01866.17 gi|568163028|ref|YP_008946335.1| - 1.1e-78 264.7 0.0 1.4e-78 264.4 0.0 1.1 1 0 0 1 1 1 1 Putative diphthamide synthesis protein EIF_2_alpha PF07541.12 gi|568163028|ref|YP_008946335.1| - 0.0031 17.6 0.2 0.028 14.5 0.0 2.4 2 1 0 2 2 2 1 Eukaryotic translation initiation factor 2 alpha subunit PhosphMutase PF10143.9 gi|568163028|ref|YP_008946335.1| - 0.06 13.2 0.2 0.24 11.3 0.1 2.0 2 1 0 2 2 2 0 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Ribosomal_L16 PF00252.18 gi|568163029|ref|YP_008946336.1| - 4.3e-33 114.1 0.3 5.1e-33 113.9 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e ArfA PF03889.13 gi|568163029|ref|YP_008946336.1| - 0.055 13.0 0.1 0.16 11.4 0.1 1.7 2 0 0 2 2 2 0 Alternative ribosome-rescue factor A Pcc1 PF09341.10 gi|568163030|ref|YP_008946337.1| - 2.7e-05 24.2 0.3 3.2e-05 24.0 0.3 1.1 1 0 0 1 1 1 1 Transcription factor Pcc1 DUF677 PF05055.12 gi|568163030|ref|YP_008946337.1| - 0.066 12.1 3.0 0.07 12.0 3.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF677) TetR_C_34 PF17929.1 gi|568163031|ref|YP_008946338.1| - 0.075 13.1 0.0 0.19 11.9 0.0 1.7 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain LPG_synthase_TM PF03706.13 gi|568163032|ref|YP_008946339.1| - 5.2e-17 62.3 14.8 8.9e-17 61.6 14.8 1.3 1 1 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region ThiF PF00899.21 gi|568163033|ref|YP_008946340.1| - 9.9e-58 195.4 0.2 1.2e-57 195.1 0.2 1.0 1 0 0 1 1 1 1 ThiF family NAD_Gly3P_dh_N PF01210.23 gi|568163033|ref|YP_008946340.1| - 0.0035 17.3 0.0 0.0071 16.3 0.0 1.5 1 1 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2-Hacid_dh_C PF02826.19 gi|568163033|ref|YP_008946340.1| - 0.0039 16.6 0.4 0.0099 15.3 0.1 1.7 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Pyr_redox_2 PF07992.14 gi|568163033|ref|YP_008946340.1| - 0.0067 15.7 0.1 0.0095 15.2 0.1 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 gi|568163033|ref|YP_008946340.1| - 0.0096 15.8 0.0 0.016 15.1 0.0 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|568163033|ref|YP_008946340.1| - 0.013 15.7 0.6 0.028 14.7 0.2 1.8 2 0 0 2 2 2 0 TrkA-N domain FAD_binding_3 PF01494.19 gi|568163033|ref|YP_008946340.1| - 0.016 14.5 0.1 0.022 14.0 0.1 1.1 1 0 0 1 1 1 0 FAD binding domain ApbA PF02558.16 gi|568163033|ref|YP_008946340.1| - 0.034 13.8 0.3 0.084 12.5 0.1 1.8 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA DAO PF01266.24 gi|568163033|ref|YP_008946340.1| - 0.084 12.4 0.2 0.11 12.0 0.2 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase F420_oxidored PF03807.17 gi|568163033|ref|YP_008946340.1| - 0.12 13.0 0.7 0.54 10.9 0.7 2.0 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent NAD_binding_8 PF13450.6 gi|568163033|ref|YP_008946340.1| - 0.17 12.1 1.1 0.38 11.0 0.7 1.8 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain PglD_N PF17836.1 gi|568163033|ref|YP_008946340.1| - 0.19 12.4 0.9 0.74 10.5 0.1 2.2 2 0 0 2 2 2 0 PglD N-terminal domain Shikimate_DH PF01488.20 gi|568163033|ref|YP_008946340.1| - 0.27 11.3 1.8 0.43 10.6 0.7 2.0 2 1 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase Transketolase_N PF00456.21 gi|568163034|ref|YP_008946341.1| - 2.1e-32 112.4 0.0 6e-32 110.9 0.0 1.6 1 1 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain DXP_synthase_N PF13292.6 gi|568163034|ref|YP_008946341.1| - 5.3e-11 42.2 0.0 6.5e-09 35.4 0.0 2.1 1 1 1 2 2 2 2 1-deoxy-D-xylulose-5-phosphate synthase TPP_enzyme_C PF02775.21 gi|568163034|ref|YP_008946341.1| - 1.2e-05 25.1 0.3 0.00026 20.8 0.3 2.2 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E1_dh PF00676.20 gi|568163034|ref|YP_008946341.1| - 0.00031 19.8 0.0 0.00044 19.3 0.0 1.2 1 0 0 1 1 1 1 Dehydrogenase E1 component XFP_N PF09364.10 gi|568163034|ref|YP_008946341.1| - 0.00065 18.6 0.1 0.00085 18.2 0.1 1.2 1 0 0 1 1 1 1 XFP N-terminal domain Transket_pyr PF02779.24 gi|568163035|ref|YP_008946342.1| - 1.5e-36 125.7 0.0 2.5e-36 125.0 0.0 1.3 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 gi|568163035|ref|YP_008946342.1| - 2.2e-31 108.3 0.0 2.9e-30 104.7 0.0 2.1 2 0 0 2 2 2 1 Transketolase, C-terminal domain PFOR_II PF17147.4 gi|568163035|ref|YP_008946342.1| - 0.0011 19.3 0.1 0.0029 17.9 0.1 1.7 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Peptidase_M8 PF01457.16 gi|568163035|ref|YP_008946342.1| - 0.17 10.5 0.0 0.25 10.0 0.0 1.1 1 0 0 1 1 1 0 Leishmanolysin PDH PF02153.17 gi|568163036|ref|YP_008946343.1| - 5.5e-19 68.2 0.0 1.1e-18 67.1 0.0 1.5 1 0 0 1 1 1 1 Prephenate dehydrogenase CM_2 PF01817.21 gi|568163036|ref|YP_008946343.1| - 8.6e-14 51.7 0.0 2.3e-13 50.3 0.0 1.8 1 0 0 1 1 1 1 Chorismate mutase type II F420_oxidored PF03807.17 gi|568163036|ref|YP_008946343.1| - 7.7e-10 39.2 0.0 1.6e-09 38.2 0.0 1.6 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent Shikimate_DH PF01488.20 gi|568163036|ref|YP_008946343.1| - 2.1e-06 27.8 0.1 6.6e-06 26.2 0.0 1.8 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase IlvN PF07991.12 gi|568163036|ref|YP_008946343.1| - 0.00016 21.3 0.0 0.00033 20.3 0.0 1.5 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain 3HCDH_N PF02737.18 gi|568163036|ref|YP_008946343.1| - 0.00029 20.8 0.0 0.0016 18.4 0.0 2.1 1 1 1 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|568163036|ref|YP_008946343.1| - 0.00096 18.5 0.0 0.0017 17.7 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DRTGG PF07085.12 gi|568163036|ref|YP_008946343.1| - 0.0015 18.3 0.0 0.082 12.7 0.0 2.6 2 1 0 2 2 2 1 DRTGG domain TrkA_N PF02254.18 gi|568163036|ref|YP_008946343.1| - 0.041 14.1 0.0 0.15 12.3 0.0 2.0 2 0 0 2 2 2 0 TrkA-N domain NAD_binding_2 PF03446.15 gi|568163036|ref|YP_008946343.1| - 0.06 13.5 0.0 0.14 12.3 0.0 1.7 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|568163036|ref|YP_008946343.1| - 0.11 12.7 0.0 0.2 11.9 0.0 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain ApbA PF02558.16 gi|568163036|ref|YP_008946343.1| - 0.12 12.0 0.0 0.23 11.1 0.0 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA GFO_IDH_MocA PF01408.22 gi|568163036|ref|YP_008946343.1| - 0.18 12.6 0.0 0.43 11.4 0.0 1.7 2 0 0 2 2 1 0 Oxidoreductase family, NAD-binding Rossmann fold DAHP_synth_1 PF00793.20 gi|568163037|ref|YP_008946344.1| - 4.7e-71 238.9 0.0 6e-71 238.5 0.0 1.0 1 0 0 1 1 1 1 DAHP synthetase I family NeuB PF03102.14 gi|568163037|ref|YP_008946344.1| - 5.1e-08 32.7 0.0 0.0038 16.7 0.0 2.8 2 1 1 3 3 3 2 NeuB family DHQ_synthase PF01761.20 gi|568163038|ref|YP_008946345.1| - 6.6e-91 304.1 0.0 8e-91 303.8 0.0 1.1 1 0 0 1 1 1 1 3-dehydroquinate synthase Fe-ADH_2 PF13685.6 gi|568163038|ref|YP_008946345.1| - 6.5e-06 26.0 0.0 1.4e-05 25.0 0.0 1.6 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.19 gi|568163038|ref|YP_008946345.1| - 1.9e-05 23.7 0.1 0.00046 19.1 0.0 2.3 2 0 0 2 2 2 2 Iron-containing alcohol dehydrogenase Shikimate_dh_N PF08501.11 gi|568163039|ref|YP_008946346.1| - 1.3e-23 83.0 0.0 3e-23 81.9 0.0 1.6 1 0 0 1 1 1 1 Shikimate dehydrogenase substrate binding domain Shikimate_DH PF01488.20 gi|568163039|ref|YP_008946346.1| - 6.3e-06 26.3 0.0 1.1e-05 25.6 0.0 1.3 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase SDH_C PF18317.1 gi|568163039|ref|YP_008946346.1| - 0.00052 19.7 0.0 0.0008 19.1 0.0 1.3 1 0 0 1 1 1 1 Shikimate 5'-dehydrogenase C-terminal domain ApbA PF02558.16 gi|568163039|ref|YP_008946346.1| - 0.00076 19.2 0.0 0.0012 18.5 0.0 1.3 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA AlaDh_PNT_C PF01262.21 gi|568163039|ref|YP_008946346.1| - 0.0094 15.3 0.0 0.014 14.7 0.0 1.2 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_7 PF13241.6 gi|568163039|ref|YP_008946346.1| - 0.0095 16.4 0.0 0.017 15.6 0.0 1.3 1 0 0 1 1 1 1 Putative NAD(P)-binding Sacchrp_dh_NADP PF03435.18 gi|568163039|ref|YP_008946346.1| - 0.011 15.9 0.0 0.029 14.7 0.0 1.8 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain F420_oxidored PF03807.17 gi|568163039|ref|YP_008946346.1| - 0.02 15.5 0.0 0.064 13.8 0.0 1.8 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Chorismate_synt PF01264.21 gi|568163040|ref|YP_008946347.1| - 7.7e-125 415.9 0.0 8.8e-125 415.7 0.0 1.0 1 0 0 1 1 1 1 Chorismate synthase GHMP_kinases_N PF00288.26 gi|568163041|ref|YP_008946348.1| - 1.7e-08 34.6 0.0 3.2e-08 33.7 0.0 1.5 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|568163041|ref|YP_008946348.1| - 0.0012 19.1 0.1 0.0025 18.1 0.1 1.5 1 0 0 1 1 1 1 GHMP kinases C terminal EPSP_synthase PF00275.20 gi|568163042|ref|YP_008946349.1| - 4.7e-72 243.0 0.0 5.5e-72 242.7 0.0 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DHquinase_I PF01487.15 gi|568163043|ref|YP_008946350.1| - 7.4e-17 62.4 0.1 9.9e-17 61.9 0.1 1.2 1 0 0 1 1 1 1 Type I 3-dehydroquinase DUF960 PF06124.11 gi|568163043|ref|YP_008946350.1| - 0.12 13.0 1.0 0.33 11.6 0.2 1.9 1 1 1 2 2 2 0 Staphylococcal protein of unknown function (DUF960) Rieske PF00355.26 gi|568163044|ref|YP_008946351.1| - 8.1e-17 61.0 0.0 1e-16 60.6 0.0 1.1 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 gi|568163044|ref|YP_008946351.1| - 1.7e-08 34.3 0.0 2.2e-08 34.0 0.0 1.1 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain OKR_DC_1_N PF03709.15 gi|568163045|ref|YP_008946352.1| - 0.014 15.7 0.2 0.022 15.0 0.2 1.3 1 1 0 1 1 1 0 Orn/Lys/Arg decarboxylase, N-terminal domain Helicase_C_2 PF13307.6 gi|568163046|ref|YP_008946353.1| - 3.2e-25 89.3 0.1 7.7e-25 88.0 0.0 1.7 2 0 0 2 2 2 1 Helicase C-terminal domain DEAD_2 PF06733.15 gi|568163046|ref|YP_008946353.1| - 1.3e-16 60.7 0.4 5.9e-16 58.6 0.4 2.0 1 1 0 1 1 1 1 DEAD_2 ResIII PF04851.15 gi|568163046|ref|YP_008946353.1| - 2.4e-08 34.2 0.4 2.4e-06 27.7 0.2 3.3 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|568163046|ref|YP_008946353.1| - 2.8e-05 24.0 0.2 0.076 12.8 0.0 3.6 3 1 0 3 3 3 2 DEAD/DEAH box helicase AAA_22 PF13401.6 gi|568163046|ref|YP_008946353.1| - 0.025 14.8 0.7 1.5 9.1 0.4 2.9 2 1 1 3 3 3 0 AAA domain PhoH PF02562.16 gi|568163046|ref|YP_008946353.1| - 0.051 13.0 0.0 0.67 9.4 0.0 2.6 3 0 0 3 3 3 0 PhoH-like protein Iron_permease PF04120.12 gi|568163046|ref|YP_008946353.1| - 1.7 8.4 6.9 1.8 8.4 1.8 2.6 1 1 2 3 3 3 0 Low affinity iron permease Thioredoxin_3 PF13192.6 gi|568163047|ref|YP_008946354.1| - 1.2e-09 38.0 0.0 3e-09 36.8 0.0 1.7 1 0 0 1 1 1 1 Thioredoxin domain Thioredoxin_4 PF13462.6 gi|568163047|ref|YP_008946354.1| - 0.006 16.8 0.0 0.015 15.4 0.0 1.7 1 0 0 1 1 1 1 Thioredoxin Glutaredoxin PF00462.24 gi|568163047|ref|YP_008946354.1| - 0.0066 16.7 0.0 0.021 15.0 0.0 1.9 1 0 0 1 1 1 1 Glutaredoxin YhfH PF14149.6 gi|568163047|ref|YP_008946354.1| - 1.8 8.6 3.5 0.48 10.5 0.2 1.8 2 0 0 2 2 2 0 YhfH-like protein TusA PF01206.17 gi|568163048|ref|YP_008946355.1| - 1.5e-05 24.7 0.0 1.7e-05 24.6 0.0 1.4 1 1 0 1 1 1 1 Sulfurtransferase TusA Sod_Fe_C PF02777.18 gi|568163049|ref|YP_008946356.1| - 3.5e-33 113.8 0.4 5.1e-33 113.3 0.4 1.2 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.22 gi|568163049|ref|YP_008946356.1| - 2.4e-29 101.6 0.1 2.4e-29 101.6 0.1 1.6 2 0 0 2 2 2 1 Iron/manganese superoxide dismutases, alpha-hairpin domain NTP_transferase PF00483.23 gi|568163050|ref|YP_008946357.1| - 1.3e-35 123.2 0.0 1.8e-35 122.7 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|568163050|ref|YP_008946357.1| - 2.1e-10 41.2 0.0 2.9e-10 40.8 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep PF00132.24 gi|568163050|ref|YP_008946357.1| - 1.5e-05 24.5 12.1 0.0053 16.4 0.4 3.1 2 1 1 3 3 3 2 Bacterial transferase hexapeptide (six repeats) Fucokinase PF07959.12 gi|568163050|ref|YP_008946357.1| - 0.0023 16.9 0.0 0.0043 16.1 0.0 1.4 1 0 0 1 1 1 1 L-fucokinase IspD PF01128.19 gi|568163050|ref|YP_008946357.1| - 0.0046 16.7 0.0 0.0094 15.7 0.0 1.5 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DUF4954 PF16314.5 gi|568163050|ref|YP_008946357.1| - 0.13 10.4 0.4 0.19 9.8 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4954) FecR PF04773.13 gi|568164744|ref|YP_008946358.1| - 0.006 17.2 0.1 0.097 13.3 0.0 2.2 2 0 0 2 2 2 1 FecR protein MetallophosN PF16371.5 gi|568164744|ref|YP_008946358.1| - 0.32 11.3 2.9 0.2 11.9 0.6 1.8 2 0 0 2 2 2 0 N terminal of Calcineurin-like phosphoesterase Thioredox_DsbH PF03190.15 gi|568163051|ref|YP_008946359.1| - 3.6e-62 209.1 0.0 5.8e-62 208.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF255 Thioredoxin_7 PF13899.6 gi|568163051|ref|YP_008946359.1| - 3.1e-15 56.1 0.1 6.6e-15 55.1 0.1 1.6 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin PF00085.20 gi|568163051|ref|YP_008946359.1| - 3.5e-05 23.7 0.2 8.3e-05 22.5 0.2 1.6 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|568163051|ref|YP_008946359.1| - 5.4e-05 23.6 0.0 0.00087 19.7 0.0 2.4 2 0 0 2 2 2 1 Thioredoxin-like domain adh_short_C2 PF13561.6 gi|568163052|ref|YP_008946360.1| - 3.6e-27 95.4 0.0 5.1e-27 94.9 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|568163052|ref|YP_008946360.1| - 1.6e-21 76.6 0.1 2.1e-21 76.3 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|568163052|ref|YP_008946360.1| - 0.00051 20.0 0.2 0.00083 19.3 0.2 1.3 1 0 0 1 1 1 1 KR domain ADH_zinc_N PF00107.26 gi|568163052|ref|YP_008946360.1| - 0.01 15.8 0.3 0.074 13.0 0.3 2.4 1 1 0 1 1 1 0 Zinc-binding dehydrogenase NucS PF01939.16 gi|568163053|ref|YP_008946361.1| - 1.2e-57 194.9 0.0 1.5e-57 194.6 0.0 1.0 1 0 0 1 1 1 1 Endonuclease NucS Cas_Cas4 PF01930.17 gi|568163053|ref|YP_008946361.1| - 0.00042 20.5 0.0 0.0014 18.8 0.0 1.8 1 1 0 2 2 2 1 Domain of unknown function DUF83 UPF0102 PF02021.17 gi|568163053|ref|YP_008946361.1| - 0.071 13.3 0.0 0.15 12.3 0.0 1.5 1 0 0 1 1 1 0 Uncharacterised protein family UPF0102 Glycos_transf_2 PF00535.26 gi|568163054|ref|YP_008946362.1| - 6.4e-19 68.4 0.0 1e-18 67.7 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.6 gi|568163054|ref|YP_008946362.1| - 1e-13 51.1 0.0 1.6e-13 50.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_3 PF13641.6 gi|568163054|ref|YP_008946362.1| - 1.9e-11 44.3 0.1 8.9e-11 42.1 0.1 1.8 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|568163054|ref|YP_008946362.1| - 0.0065 16.0 0.0 0.009 15.5 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 DUF3040 PF11239.8 gi|568164745|ref|YP_008946363.1| - 0.14 12.4 5.5 1.6 9.0 0.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3040) DUF4404 PF14357.6 gi|568163055|ref|YP_008946364.1| - 0.052 14.2 1.8 0.38 11.4 1.7 2.2 1 1 0 1 1 1 0 Domain of unknown function (DUF4404) Presenilin PF01080.17 gi|568163055|ref|YP_008946364.1| - 0.11 11.3 1.4 0.12 11.1 1.4 1.1 1 0 0 1 1 1 0 Presenilin MDM10 PF12519.8 gi|568163055|ref|YP_008946364.1| - 0.12 11.2 3.9 0.17 10.7 3.9 1.2 1 0 0 1 1 1 0 Mitochondrial distribution and morphology protein 10 AAA_31 PF13614.6 gi|568163056|ref|YP_008946365.1| - 4.2e-28 98.4 1.6 2.4e-26 92.7 1.6 2.1 1 1 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|568163056|ref|YP_008946365.1| - 1.1e-13 51.3 0.3 1.8e-13 50.6 0.2 1.5 2 0 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|568163056|ref|YP_008946365.1| - 5.6e-12 45.6 0.8 1.4e-11 44.3 0.8 1.6 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase MipZ PF09140.11 gi|568163056|ref|YP_008946365.1| - 3.5e-10 39.6 0.0 5.6e-10 38.9 0.0 1.4 1 1 0 1 1 1 1 ATPase MipZ ArsA_ATPase PF02374.15 gi|568163056|ref|YP_008946365.1| - 6.1e-07 28.9 0.1 7.8e-05 22.0 0.1 2.2 2 0 0 2 2 2 2 Anion-transporting ATPase CBP_BcsQ PF06564.12 gi|568163056|ref|YP_008946365.1| - 0.00011 21.8 0.0 0.37 10.2 0.0 2.1 2 0 0 2 2 2 2 Cellulose biosynthesis protein BcsQ Latrotoxin_C PF15658.6 gi|568163056|ref|YP_008946365.1| - 0.028 14.2 0.0 0.051 13.3 0.0 1.4 1 0 0 1 1 1 0 Latrotoxin C-terminal domain Fer4_NifH PF00142.18 gi|568163056|ref|YP_008946365.1| - 0.029 13.8 0.1 0.067 12.6 0.1 1.6 1 0 0 1 1 1 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family RuvB_N PF05496.12 gi|568163056|ref|YP_008946365.1| - 0.03 14.1 0.4 0.13 12.0 0.1 2.1 2 1 1 3 3 3 0 Holliday junction DNA helicase RuvB P-loop domain AAA_24 PF13479.6 gi|568163056|ref|YP_008946365.1| - 0.047 13.4 0.0 0.086 12.6 0.0 1.4 1 1 0 1 1 1 0 AAA domain VirC1 PF07015.11 gi|568163056|ref|YP_008946365.1| - 0.14 11.4 0.1 0.25 10.6 0.1 1.4 1 0 0 1 1 1 0 VirC1 protein CLP1_P PF16575.5 gi|568163056|ref|YP_008946365.1| - 0.15 11.8 0.1 0.22 11.3 0.1 1.4 1 1 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop CCG PF02754.16 gi|568163057|ref|YP_008946366.1| - 7.6e-14 51.7 0.2 1.5e-05 25.1 0.0 2.5 2 0 0 2 2 2 2 Cysteine-rich domain Fer4_8 PF13183.6 gi|568163057|ref|YP_008946366.1| - 1e-11 45.1 5.3 2.3e-11 44.0 5.3 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|568163057|ref|YP_008946366.1| - 2.3e-10 40.8 5.1 6.3e-10 39.5 5.1 1.8 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|568163057|ref|YP_008946366.1| - 4.7e-10 39.9 6.9 1e-09 38.8 6.9 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|568163057|ref|YP_008946366.1| - 5.7e-07 29.1 11.0 0.0013 18.4 2.0 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|568163057|ref|YP_008946366.1| - 6.4e-07 29.5 6.2 2.1e-06 27.8 6.2 1.9 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|568163057|ref|YP_008946366.1| - 1.2e-06 28.5 9.3 2.8e-05 24.1 10.6 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|568163057|ref|YP_008946366.1| - 0.0001 22.2 8.5 0.0034 17.4 1.5 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|568163057|ref|YP_008946366.1| - 0.00023 21.4 12.1 0.059 13.9 2.1 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|568163057|ref|YP_008946366.1| - 0.0011 18.9 13.8 0.012 15.6 2.1 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|568163057|ref|YP_008946366.1| - 0.0027 18.6 10.2 0.068 14.1 10.6 2.4 1 1 1 2 2 2 1 4Fe-4S double cluster binding domain Fer4_3 PF12798.7 gi|568163057|ref|YP_008946366.1| - 0.037 15.0 16.9 0.72 10.9 5.0 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|568163057|ref|YP_008946366.1| - 0.078 13.8 7.1 3.1 8.7 0.6 3.1 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|568163057|ref|YP_008946366.1| - 0.082 13.0 12.2 2.4 8.3 12.5 2.5 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|568163057|ref|YP_008946366.1| - 0.21 11.8 7.4 0.87 9.8 1.0 2.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|568163057|ref|YP_008946366.1| - 2.4 8.8 5.8 21 5.7 0.2 2.4 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I FAD-oxidase_C PF02913.19 gi|568163058|ref|YP_008946367.1| - 3.5e-53 180.8 0.0 4.9e-53 180.3 0.0 1.2 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 gi|568163058|ref|YP_008946367.1| - 9.8e-29 99.9 0.2 1.4e-28 99.3 0.2 1.3 1 0 0 1 1 1 1 FAD binding domain FAD_binding_4 PF01565.23 gi|568163059|ref|YP_008946368.1| - 2.7e-17 62.8 0.0 4.2e-17 62.2 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain TPP_enzyme_C PF02775.21 gi|568163060|ref|YP_008946369.1| - 1.3e-32 112.7 0.4 6.5e-32 110.4 0.1 1.9 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFO_beta_C PF12367.8 gi|568163060|ref|YP_008946369.1| - 1.9e-23 82.4 0.7 3.9e-23 81.4 0.7 1.5 1 0 0 1 1 1 1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal POR_N PF01855.19 gi|568163061|ref|YP_008946370.1| - 1.6e-62 211.3 0.2 1.2e-61 208.4 0.0 2.0 2 0 0 2 2 2 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg POR PF01558.18 gi|568163061|ref|YP_008946370.1| - 2.7e-35 122.0 1.3 5.9e-35 120.9 0.7 1.9 2 0 0 2 2 2 1 Pyruvate ferredoxin/flavodoxin oxidoreductase PFOR_II PF17147.4 gi|568163061|ref|YP_008946370.1| - 6.2e-05 23.3 0.1 0.0004 20.7 0.0 2.6 2 1 0 2 2 2 1 Pyruvate:ferredoxin oxidoreductase core domain II TPP_enzyme_N PF02776.18 gi|568163061|ref|YP_008946370.1| - 0.00012 21.7 1.5 0.0094 15.6 0.9 2.8 2 1 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DUF2164 PF09932.9 gi|568163061|ref|YP_008946370.1| - 0.13 12.4 0.0 0.32 11.1 0.0 1.7 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2164) Asp23 PF03780.13 gi|568163061|ref|YP_008946370.1| - 1.2 9.6 7.5 0.31 11.5 3.5 2.1 2 0 0 2 2 2 0 Asp23 family, cell envelope-related function SepF PF04472.12 gi|568163062|ref|YP_008946371.1| - 0.033 14.5 0.0 0.11 12.8 0.0 1.8 2 0 0 2 2 2 0 Cell division protein SepF BtrH_N PF14399.6 gi|568163062|ref|YP_008946371.1| - 0.14 12.4 0.0 0.28 11.4 0.0 1.4 1 0 0 1 1 1 0 Butirosin biosynthesis protein H, N-terminal CN_hydrolase PF00795.22 gi|568163063|ref|YP_008946372.1| - 1e-15 57.8 0.0 1.7e-15 57.1 0.0 1.3 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase CBS PF00571.28 gi|568163064|ref|YP_008946373.1| - 1.8e-33 114.7 4.8 2e-10 41.0 0.0 4.4 4 0 0 4 4 4 4 CBS domain Ribosomal_S30AE PF02482.19 gi|568163064|ref|YP_008946373.1| - 1.7e-05 25.5 2.5 5.9e-05 23.8 2.5 1.9 1 0 0 1 1 1 1 Sigma 54 modulation protein / S30EA ribosomal protein Hist_deacetyl PF00850.19 gi|568163065|ref|YP_008946374.1| - 2.5e-74 250.5 0.0 3.3e-74 250.1 0.0 1.1 1 0 0 1 1 1 1 Histone deacetylase domain ATP-grasp PF02222.22 gi|568163066|ref|YP_008946375.1| - 6.1e-43 146.3 0.1 1.2e-42 145.4 0.1 1.5 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|568163066|ref|YP_008946375.1| - 4.8e-11 42.5 0.1 1.4e-10 41.0 0.1 1.8 2 0 0 2 2 2 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Dala_Dala_lig_C PF07478.13 gi|568163066|ref|YP_008946375.1| - 3.5e-10 39.7 0.1 7.4e-10 38.7 0.1 1.5 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp_3 PF02655.14 gi|568163066|ref|YP_008946375.1| - 3.5e-06 27.1 0.4 1.8e-05 24.9 0.4 2.0 1 1 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.19 gi|568163066|ref|YP_008946375.1| - 9.3e-06 25.5 0.1 5.9e-05 22.9 0.0 2.1 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LAL_C2 PF18603.1 gi|568163066|ref|YP_008946375.1| - 0.00068 19.8 0.1 0.0018 18.4 0.1 1.8 1 1 0 1 1 1 1 L-amino acid ligase C-terminal domain 2 PurK_C PF17769.1 gi|568163066|ref|YP_008946375.1| - 0.0017 18.0 0.0 0.0035 17.0 0.0 1.5 1 0 0 1 1 1 1 Phosphoribosylaminoimidazole carboxylase C-terminal domain ATPgrasp_ST PF14397.6 gi|568163066|ref|YP_008946375.1| - 0.0017 17.6 0.0 0.011 15.0 0.0 2.1 2 0 0 2 2 2 1 Sugar-transfer associated ATP-grasp ATP-grasp_5 PF13549.6 gi|568163066|ref|YP_008946375.1| - 0.014 14.9 0.3 0.047 13.2 0.1 2.0 2 1 0 2 2 2 0 ATP-grasp domain Pyr_redox PF00070.27 gi|568163066|ref|YP_008946375.1| - 0.018 15.6 0.8 5.4 7.7 0.0 3.3 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase TT1725 PF18324.1 gi|568163066|ref|YP_008946375.1| - 0.022 14.8 0.0 0.043 13.9 0.0 1.4 1 0 0 1 1 1 0 Hypothetical protein TT1725 ATP-grasp_4 PF13535.6 gi|568163066|ref|YP_008946375.1| - 0.088 12.4 0.2 0.23 11.1 0.2 1.8 1 1 0 1 1 1 0 ATP-grasp domain ATPgrasp_N PF18130.1 gi|568163066|ref|YP_008946375.1| - 0.11 13.1 0.1 0.85 10.2 0.1 2.5 2 0 0 2 2 2 0 ATP-grasp N-terminal domain LAP2alpha PF11560.8 gi|568163066|ref|YP_008946375.1| - 0.11 11.9 0.0 0.17 11.3 0.0 1.3 1 0 0 1 1 1 0 Lamina-associated polypeptide 2 alpha TPD PF14811.6 gi|568163067|ref|YP_008946376.1| - 0.0051 16.7 0.1 0.43 10.5 0.1 2.2 1 1 0 1 1 1 1 Protein of unknown function TPD sequence-motif DAO PF01266.24 gi|568163071|ref|YP_008946380.1| - 2.4e-11 43.8 0.0 3.5e-07 30.1 0.0 2.1 2 0 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|568163071|ref|YP_008946380.1| - 0.022 14.0 0.0 0.033 13.4 0.0 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.16 gi|568163071|ref|YP_008946380.1| - 0.037 13.7 0.2 0.1 12.3 0.1 1.7 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA Pyr_redox PF00070.27 gi|568163071|ref|YP_008946380.1| - 0.04 14.5 0.0 0.1 13.1 0.0 1.7 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 gi|568163071|ref|YP_008946380.1| - 0.053 13.4 0.0 0.084 12.8 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_8 PF13450.6 gi|568163071|ref|YP_008946380.1| - 0.08 13.2 0.0 0.39 11.0 0.1 2.1 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain MoCF_biosynth PF00994.24 gi|568163073|ref|YP_008946382.1| - 2.2e-32 111.7 0.1 2.5e-32 111.5 0.1 1.0 1 0 0 1 1 1 1 Probable molybdopterin binding domain B12-binding PF02310.19 gi|568163073|ref|YP_008946382.1| - 0.036 14.1 0.0 0.048 13.7 0.0 1.3 1 0 0 1 1 1 0 B12 binding domain DUF1286 PF06939.11 gi|568163074|ref|YP_008946383.1| - 7.1e-43 145.4 5.7 9.9e-43 145.0 5.7 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1286) YdjM PF04307.14 gi|568163074|ref|YP_008946383.1| - 0.00016 21.0 0.8 0.00023 20.5 0.8 1.4 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase OppC_N PF12911.7 gi|568163074|ref|YP_008946383.1| - 0.022 14.7 0.3 0.022 14.7 0.3 2.9 3 0 0 3 3 3 0 N-terminal TM domain of oligopeptide transport permease C DHDPS PF00701.22 gi|568163076|ref|YP_008946385.1| - 2.2e-40 138.2 0.0 2.5e-40 138.0 0.0 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family NuDC PF16273.5 gi|568163076|ref|YP_008946385.1| - 0.095 13.2 0.0 0.19 12.3 0.0 1.4 1 0 0 1 1 1 0 Nuclear distribution C domain PfkB PF00294.24 gi|568163077|ref|YP_008946386.1| - 6.5e-42 143.9 0.0 7.4e-42 143.7 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Aldedh PF00171.22 gi|568163078|ref|YP_008946387.1| - 8.9e-112 373.9 0.0 1.1e-111 373.7 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 gi|568163078|ref|YP_008946387.1| - 3e-07 29.8 0.0 4.5e-07 29.2 0.0 1.2 1 0 0 1 1 1 1 Acyl-CoA reductase (LuxC) Rieske PF00355.26 gi|568163079|ref|YP_008946388.1| - 1.6e-09 37.6 0.0 1.9e-09 37.4 0.0 1.1 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 gi|568163079|ref|YP_008946388.1| - 0.089 12.7 0.0 0.11 12.5 0.0 1.2 1 0 0 1 1 1 0 Rieske-like [2Fe-2S] domain PG_binding_2 PF08823.11 gi|568164747|ref|YP_008946390.1| - 0.029 14.7 0.0 0.093 13.1 0.0 1.8 2 0 0 2 2 2 0 Putative peptidoglycan binding domain Birna_RdRp PF04197.12 gi|568164747|ref|YP_008946390.1| - 0.13 10.5 0.0 0.15 10.3 0.0 1.0 1 0 0 1 1 1 0 Birnavirus RNA dependent RNA polymerase (VP1) DUF3094 PF11293.8 gi|568164750|ref|YP_008946393.1| - 1.4 8.7 3.6 7.6 6.3 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3094) Linocin_M18 PF04454.12 gi|568163080|ref|YP_008946394.1| - 8.8e-17 61.2 0.0 1.3e-16 60.7 0.0 1.3 1 0 0 1 1 1 1 Encapsulating protein for peroxidase Rubrerythrin PF02915.17 gi|568163080|ref|YP_008946394.1| - 0.0045 17.4 1.2 0.0045 17.4 1.2 1.7 2 0 0 2 2 2 1 Rubrerythrin Ferritin PF00210.24 gi|568163080|ref|YP_008946394.1| - 0.0076 16.2 0.6 0.0076 16.2 0.6 1.9 2 0 0 2 2 2 1 Ferritin-like domain Lys_export PF03956.13 gi|568163082|ref|YP_008946396.1| - 2.6e-46 157.6 17.3 2.6e-46 157.6 17.3 2.0 2 0 0 2 2 2 1 Lysine exporter LysO Sbt_1 PF05982.12 gi|568163082|ref|YP_008946396.1| - 0.011 15.0 5.1 0.011 15.0 5.1 2.7 2 1 1 3 3 3 0 Na+-dependent bicarbonate transporter superfamily MFS_1 PF07690.16 gi|568163083|ref|YP_008946397.1| - 7.2e-45 153.4 77.8 1.3e-38 132.8 42.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily US10 PF17617.2 gi|568163084|ref|YP_008946398.1| - 0.18 11.9 0.0 0.23 11.5 0.0 1.2 1 0 0 1 1 1 0 Viral unique short region 10 PmbA_TldD PF01523.16 gi|568163085|ref|YP_008946399.1| - 1.5e-14 54.5 0.0 2.3e-14 53.9 0.0 1.2 1 0 0 1 1 1 1 Putative modulator of DNA gyrase adh_short_C2 PF13561.6 gi|568163086|ref|YP_008946400.1| - 8.2e-64 215.4 0.3 1.1e-63 215.0 0.3 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|568163086|ref|YP_008946400.1| - 3.9e-54 183.1 1.5 4.8e-54 182.8 1.5 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|568163086|ref|YP_008946400.1| - 5.9e-14 52.4 0.1 9.5e-14 51.7 0.1 1.3 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|568163086|ref|YP_008946400.1| - 1.3e-06 28.0 0.1 2.5e-06 27.2 0.1 1.5 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family 3Beta_HSD PF01073.19 gi|568163086|ref|YP_008946400.1| - 0.00013 21.1 0.3 0.00018 20.6 0.3 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 gi|568163086|ref|YP_008946400.1| - 0.00043 19.5 0.0 0.00056 19.2 0.0 1.3 1 0 0 1 1 1 1 Male sterility protein NmrA PF05368.13 gi|568163086|ref|YP_008946400.1| - 0.00075 19.1 0.5 0.0013 18.3 0.5 1.4 1 0 0 1 1 1 1 NmrA-like family Polysacc_synt_2 PF02719.15 gi|568163086|ref|YP_008946400.1| - 0.00086 18.5 0.5 0.001 18.3 0.5 1.1 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_10 PF13460.6 gi|568163086|ref|YP_008946400.1| - 0.0026 17.7 0.0 0.0037 17.2 0.0 1.4 1 0 0 1 1 1 1 NAD(P)H-binding 2-Hacid_dh_C PF02826.19 gi|568163086|ref|YP_008946400.1| - 0.016 14.6 0.3 0.034 13.5 0.3 1.7 1 1 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|568163086|ref|YP_008946400.1| - 0.018 15.3 0.1 0.046 14.0 0.1 1.7 2 0 0 2 2 2 0 TrkA-N domain THF_DHG_CYH_C PF02882.19 gi|568163086|ref|YP_008946400.1| - 0.028 13.7 0.1 0.25 10.7 0.1 2.3 1 1 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DUF1776 PF08643.10 gi|568163086|ref|YP_008946400.1| - 0.097 12.0 0.0 0.38 10.1 0.0 1.8 1 1 0 1 1 1 0 Fungal family of unknown function (DUF1776) RmlD_sub_bind PF04321.17 gi|568163086|ref|YP_008946400.1| - 0.13 11.4 0.0 0.19 10.8 0.0 1.2 1 0 0 1 1 1 0 RmlD substrate binding domain Phage_fiber_C PF06820.12 gi|568163086|ref|YP_008946400.1| - 0.14 12.5 0.0 3.5 8.0 0.0 2.3 2 0 0 2 2 2 0 Putative prophage tail fibre C-terminus ATPgrasp_N PF18130.1 gi|568163086|ref|YP_008946400.1| - 0.17 12.5 0.1 1.5 9.5 0.0 2.1 2 0 0 2 2 2 0 ATP-grasp N-terminal domain HAD_2 PF13419.6 gi|568163087|ref|YP_008946401.1| - 9e-13 48.7 0.0 1.3e-12 48.2 0.0 1.3 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|568163087|ref|YP_008946401.1| - 1.9e-09 38.1 0.0 2.6e-09 37.7 0.0 1.4 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 gi|568163087|ref|YP_008946401.1| - 0.014 15.5 0.0 0.029 14.5 0.0 1.6 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|568163087|ref|YP_008946401.1| - 0.023 14.7 0.0 0.041 13.9 0.0 1.4 1 0 0 1 1 1 0 HAD-hyrolase-like LisH PF08513.11 gi|568163087|ref|YP_008946401.1| - 0.031 14.2 0.6 0.031 14.2 0.6 2.8 3 0 0 3 3 3 0 LisH Radical_SAM PF04055.21 gi|568163088|ref|YP_008946402.1| - 1.2e-14 55.0 0.0 3.1e-13 50.4 0.0 2.6 3 0 0 3 3 3 1 Radical SAM superfamily Yip1 PF04893.17 gi|568163089|ref|YP_008946403.1| - 0.33 10.7 25.6 0.5 10.1 25.6 1.3 1 0 0 1 1 1 0 Yip1 domain TctB PF07331.11 gi|568163089|ref|YP_008946403.1| - 0.45 10.8 19.5 0.72 10.1 19.5 1.3 1 0 0 1 1 1 0 Tripartite tricarboxylate transporter TctB family DUF1129 PF06570.11 gi|568163089|ref|YP_008946403.1| - 2.8 7.4 16.9 25 4.3 16.9 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF1129) Cation_efflux PF01545.21 gi|568163090|ref|YP_008946404.1| - 1.5e-16 60.7 24.6 1.9e-16 60.4 24.6 1.1 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|568163090|ref|YP_008946404.1| - 0.0014 18.7 0.9 0.035 14.2 0.8 2.2 1 1 1 2 2 2 1 Dimerisation domain of Zinc Transporter Vma12 PF11712.8 gi|568163090|ref|YP_008946404.1| - 3.3 7.8 5.1 6.4 6.8 1.8 2.3 1 1 1 2 2 2 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Citrate_synt PF00285.21 gi|568163091|ref|YP_008946405.1| - 7.7e-93 311.4 0.0 8.6e-93 311.3 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain DUF4325 PF14213.6 gi|568163091|ref|YP_008946405.1| - 0.051 13.3 0.1 0.9 9.3 0.0 2.7 3 0 0 3 3 3 0 STAS-like domain of unknown function (DUF4325) TraI_2_C PF07515.11 gi|568163091|ref|YP_008946405.1| - 0.074 13.0 0.0 0.17 11.9 0.0 1.5 1 0 0 1 1 1 0 Putative conjugal transfer nickase/helicase TraI C-term CBS PF00571.28 gi|568164751|ref|YP_008946406.1| - 0.011 16.2 0.0 0.014 15.8 0.0 1.2 1 0 0 1 1 1 0 CBS domain PEP_mutase PF13714.6 gi|568163092|ref|YP_008946407.1| - 1.2e-55 188.6 0.1 1.3e-55 188.4 0.1 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate phosphomutase ICL PF00463.21 gi|568163092|ref|YP_008946407.1| - 5.9e-14 51.4 0.3 8.2e-14 51.0 0.3 1.2 1 0 0 1 1 1 1 Isocitrate lyase family ComA PF02679.15 gi|568163092|ref|YP_008946407.1| - 0.018 14.5 0.1 0.06 12.8 0.1 1.9 1 1 0 1 1 1 0 (2R)-phospho-3-sulfolactate synthase (ComA) MmgE_PrpD PF03972.14 gi|568163093|ref|YP_008946408.1| - 1.3e-94 317.2 0.0 1.7e-94 316.9 0.0 1.0 1 0 0 1 1 1 1 MmgE/PrpD family UBA_6 PF18039.1 gi|568163093|ref|YP_008946408.1| - 0.026 14.4 0.0 0.057 13.3 0.0 1.5 1 0 0 1 1 1 0 UBA-like domain IF2_N PF04760.15 gi|568163093|ref|YP_008946408.1| - 0.052 13.4 2.6 0.078 12.8 0.4 2.4 2 0 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region Ldh_1_N PF00056.23 gi|568163094|ref|YP_008946409.1| - 1.6e-33 115.7 0.4 3.1e-33 114.8 0.4 1.4 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 gi|568163094|ref|YP_008946409.1| - 9.8e-07 28.9 0.1 1.5e-06 28.2 0.1 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain F420_oxidored PF03807.17 gi|568163094|ref|YP_008946409.1| - 0.0011 19.4 0.1 0.0046 17.5 0.0 2.1 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|568163094|ref|YP_008946409.1| - 0.0023 18.1 0.0 0.0095 16.1 0.0 2.1 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase 3HCDH_N PF02737.18 gi|568163094|ref|YP_008946409.1| - 0.0023 17.8 0.0 0.005 16.8 0.0 1.6 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|568163094|ref|YP_008946409.1| - 0.006 16.6 0.2 0.04 13.9 0.0 2.4 2 1 1 3 3 3 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RuvA_C PF07499.13 gi|568163094|ref|YP_008946409.1| - 0.13 12.7 1.3 0.6 10.6 0.1 2.6 3 0 0 3 3 3 0 RuvA, C-terminal domain 2-Hacid_dh_C PF02826.19 gi|568163095|ref|YP_008946410.1| - 7.6e-32 110.1 0.0 1.1e-31 109.5 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|568163095|ref|YP_008946410.1| - 5.7e-10 39.0 0.0 6.8e-10 38.7 0.0 1.1 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AdoHcyase_NAD PF00670.21 gi|568163095|ref|YP_008946410.1| - 0.0024 18.0 0.0 0.0042 17.2 0.0 1.3 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain EVE PF01878.18 gi|568163096|ref|YP_008946411.1| - 1.8e-21 76.7 0.0 2.1e-21 76.5 0.0 1.0 1 0 0 1 1 1 1 EVE domain Aminotran_5 PF00266.19 gi|568163097|ref|YP_008946412.1| - 1.3e-37 129.6 0.0 1.7e-37 129.3 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Nitroreductase PF00881.24 gi|568163098|ref|YP_008946413.1| - 1.2e-29 103.5 0.0 1.9e-29 102.9 0.0 1.3 1 1 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.6 gi|568163098|ref|YP_008946413.1| - 1.1e-08 34.9 1.2 0.071 12.7 0.0 3.4 2 1 1 3 3 3 3 Putative TM nitroreductase DUF1104 PF06518.11 gi|568163098|ref|YP_008946413.1| - 0.052 13.9 0.1 0.089 13.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1104) Beta_lactamase3 PF17030.5 gi|568163098|ref|YP_008946413.1| - 0.12 11.6 1.1 0.13 11.5 0.0 1.5 2 0 0 2 2 2 0 Putative beta-lactamase-like family Aconitase_C PF00694.19 gi|568163100|ref|YP_008946415.1| - 1.5e-21 77.1 0.0 2.2e-21 76.6 0.0 1.3 1 0 0 1 1 1 1 Aconitase C-terminal domain Aconitase_2_N PF06434.13 gi|568163100|ref|YP_008946415.1| - 0.00032 20.4 2.4 0.021 14.5 2.4 2.2 1 1 0 1 1 1 1 Aconitate hydratase 2 N-terminus IlvN PF07991.12 gi|568163100|ref|YP_008946415.1| - 0.0036 16.9 0.1 0.0054 16.3 0.1 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain Aconitase PF00330.20 gi|568163101|ref|YP_008946416.1| - 2.2e-80 270.9 0.3 5e-47 160.9 0.0 2.4 1 1 1 2 2 2 2 Aconitase family (aconitate hydratase) DUF521 PF04412.13 gi|568163101|ref|YP_008946416.1| - 0.00012 21.0 0.0 0.00016 20.5 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF521) TatC PF00902.18 gi|568163102|ref|YP_008946417.1| - 6.3e-45 153.6 19.3 7.8e-45 153.2 19.3 1.1 1 0 0 1 1 1 1 Sec-independent protein translocase protein (TatC) Lipoprotein_3 PF00938.17 gi|568164752|ref|YP_008946418.1| - 0.0012 19.0 3.0 0.26 11.5 0.1 2.1 1 1 1 2 2 2 2 Lipoprotein ATG16 PF08614.11 gi|568164752|ref|YP_008946418.1| - 0.0029 17.9 1.0 0.0037 17.5 1.0 1.1 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) GAS PF13851.6 gi|568164752|ref|YP_008946418.1| - 0.015 14.7 8.9 0.023 14.0 8.9 1.3 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding ArAE_1_C PF11728.8 gi|568164752|ref|YP_008946418.1| - 0.015 15.3 6.1 0.055 13.5 5.6 1.8 1 1 0 1 1 1 0 Putative aromatic acid exporter C-terminal domain Dynactin_p22 PF07426.11 gi|568164752|ref|YP_008946418.1| - 0.027 14.3 6.4 0.78 9.6 1.2 2.1 2 0 0 2 2 2 0 Dynactin subunit p22 PRKG1_interact PF15898.5 gi|568164752|ref|YP_008946418.1| - 0.032 15.1 4.8 0.042 14.7 4.8 1.3 1 0 0 1 1 1 0 cGMP-dependent protein kinase interacting domain STAT_alpha PF01017.20 gi|568164752|ref|YP_008946418.1| - 0.035 14.0 1.0 0.39 10.6 0.1 2.0 2 0 0 2 2 2 0 STAT protein, all-alpha domain Bac_RepA_C PF18008.1 gi|568164752|ref|YP_008946418.1| - 0.036 14.4 0.5 0.036 14.4 0.5 1.6 1 1 1 2 2 2 0 Replication initiator protein A C-terminal domain HSBP1 PF06825.12 gi|568164752|ref|YP_008946418.1| - 0.043 13.7 0.2 0.13 12.1 0.1 1.8 2 0 0 2 2 2 0 Heat shock factor binding protein 1 FlxA PF14282.6 gi|568164752|ref|YP_008946418.1| - 0.052 13.5 1.2 0.27 11.2 0.2 2.1 2 0 0 2 2 2 0 FlxA-like protein MCPsignal PF00015.21 gi|568164752|ref|YP_008946418.1| - 0.053 13.3 0.2 0.084 12.7 0.2 1.3 1 0 0 1 1 1 0 Methyl-accepting chemotaxis protein (MCP) signalling domain ZapB PF06005.12 gi|568164752|ref|YP_008946418.1| - 0.057 13.9 9.0 1.5 9.3 1.7 2.2 2 0 0 2 2 2 0 Cell division protein ZapB Mst1_SARAH PF11629.8 gi|568164752|ref|YP_008946418.1| - 0.061 13.4 2.8 7 6.8 0.1 2.3 2 0 0 2 2 2 0 C terminal SARAH domain of Mst1 Cob_adeno_trans PF01923.18 gi|568164752|ref|YP_008946418.1| - 0.08 13.1 0.2 0.099 12.8 0.2 1.1 1 0 0 1 1 1 0 Cobalamin adenosyltransferase SAB PF04382.13 gi|568164752|ref|YP_008946418.1| - 0.099 12.7 0.3 0.099 12.7 0.3 2.2 2 1 0 2 2 2 0 SAB domain PKcGMP_CC PF16808.5 gi|568164752|ref|YP_008946418.1| - 0.14 12.0 7.0 0.52 10.2 2.8 2.5 2 0 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Laminin_II PF06009.12 gi|568164752|ref|YP_008946418.1| - 0.15 12.1 4.2 0.2 11.7 4.2 1.2 1 0 0 1 1 1 0 Laminin Domain II bZIP_1 PF00170.21 gi|568164752|ref|YP_008946418.1| - 0.16 12.1 9.5 1.9 8.6 0.8 2.3 2 0 0 2 2 2 0 bZIP transcription factor Snapin_Pallidin PF14712.6 gi|568164752|ref|YP_008946418.1| - 0.17 12.4 5.8 20 5.7 5.9 2.1 1 1 1 2 2 2 0 Snapin/Pallidin Med21 PF11221.8 gi|568164752|ref|YP_008946418.1| - 0.18 12.0 5.1 4.2 7.6 0.7 2.1 2 0 0 2 2 2 0 Subunit 21 of Mediator complex DUF4140 PF13600.6 gi|568164752|ref|YP_008946418.1| - 0.19 12.2 3.2 3 8.4 3.2 2.0 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) GTP-bdg_M PF16360.5 gi|568164752|ref|YP_008946418.1| - 0.23 12.1 5.2 0.23 12.1 0.7 2.2 2 0 0 2 2 2 0 GTP-binding GTPase Middle Region DUF5446 PF17522.2 gi|568164752|ref|YP_008946418.1| - 0.23 11.7 5.7 0.15 12.2 0.9 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5446) DUF948 PF06103.11 gi|568164752|ref|YP_008946418.1| - 0.29 11.4 2.1 3.6 7.9 2.1 2.1 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Fib_alpha PF08702.10 gi|568164752|ref|YP_008946418.1| - 0.32 11.2 7.0 0.47 10.6 7.0 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF5320 PF17253.2 gi|568164752|ref|YP_008946418.1| - 0.34 12.0 1.5 0.48 11.5 0.4 1.6 1 1 1 2 2 1 0 Family of unknown function (DUF5320) Prefoldin PF02996.17 gi|568164752|ref|YP_008946418.1| - 0.35 10.8 7.7 1.7 8.6 0.9 2.1 2 0 0 2 2 2 0 Prefoldin subunit SLATT_6 PF18169.1 gi|568164752|ref|YP_008946418.1| - 0.42 10.2 2.3 0.6 9.7 0.8 1.8 1 1 1 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 6 TMF_DNA_bd PF12329.8 gi|568164752|ref|YP_008946418.1| - 0.42 10.6 9.6 0.61 10.1 1.8 2.2 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding Swi5 PF07061.11 gi|568164752|ref|YP_008946418.1| - 0.45 10.6 5.4 1.8 8.7 0.3 2.7 2 1 0 2 2 2 0 Swi5 Rad50_zn_hook PF04423.14 gi|568164752|ref|YP_008946418.1| - 0.59 10.0 4.9 0.73 9.7 0.5 2.4 2 1 0 2 2 2 0 Rad50 zinc hook motif V_ATPase_I PF01496.19 gi|568164752|ref|YP_008946418.1| - 0.7 7.7 4.5 0.82 7.5 4.5 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family Occludin_ELL PF07303.13 gi|568164752|ref|YP_008946418.1| - 0.73 10.6 6.1 3.9 8.3 0.9 2.2 1 1 1 2 2 2 0 Occludin homology domain Prefoldin_2 PF01920.20 gi|568164752|ref|YP_008946418.1| - 0.87 9.6 9.1 3.8 7.5 9.1 1.9 1 1 0 1 1 1 0 Prefoldin subunit DivIC PF04977.15 gi|568164752|ref|YP_008946418.1| - 0.92 9.3 11.2 1.2 8.9 2.6 2.2 1 1 0 2 2 2 0 Septum formation initiator FAM76 PF16046.5 gi|568164752|ref|YP_008946418.1| - 1.2 8.5 5.9 4.9 6.4 0.7 1.9 1 1 1 2 2 2 0 FAM76 protein FlaC_arch PF05377.11 gi|568164752|ref|YP_008946418.1| - 1.3 9.5 10.2 2.9 8.3 1.1 2.8 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) Pox_A_type_inc PF04508.12 gi|568164752|ref|YP_008946418.1| - 3.4 7.7 14.1 0.61 10.0 2.4 2.8 3 0 0 3 3 2 0 Viral A-type inclusion protein repeat WD40_alt PF14077.6 gi|568164752|ref|YP_008946418.1| - 6.2 6.8 7.2 0.97 9.3 1.6 2.3 2 1 0 2 2 2 0 Alternative WD40 repeat motif XhlA PF10779.9 gi|568164752|ref|YP_008946418.1| - 8.3 6.7 7.8 1.6 9.0 0.9 2.3 2 1 0 2 2 2 0 Haemolysin XhlA MttA_Hcf106 PF02416.16 gi|568163103|ref|YP_008946419.1| - 7.3e-12 44.4 6.1 4e-11 42.1 6.1 2.0 1 1 0 1 1 1 1 mttA/Hcf106 family DUF4446 PF14584.6 gi|568163103|ref|YP_008946419.1| - 0.0026 17.8 1.2 0.0032 17.5 1.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF4446) FAM184 PF15665.5 gi|568163103|ref|YP_008946419.1| - 0.0031 17.3 6.7 0.0037 17.1 6.7 1.0 1 0 0 1 1 1 1 Family with sequence similarity 184, A and B DUF4834 PF16118.5 gi|568163103|ref|YP_008946419.1| - 0.0044 18.0 0.4 0.0057 17.6 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4834) HNOBA PF07701.14 gi|568163103|ref|YP_008946419.1| - 0.024 14.1 2.2 0.025 14.0 2.2 1.1 1 0 0 1 1 1 0 Heme NO binding associated DUF3573 PF12097.8 gi|568163103|ref|YP_008946419.1| - 0.03 13.2 1.0 0.03 13.2 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) DUF4140 PF13600.6 gi|568163103|ref|YP_008946419.1| - 0.044 14.2 3.0 0.058 13.8 3.0 1.1 1 0 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) DUF5320 PF17253.2 gi|568163103|ref|YP_008946419.1| - 0.077 14.1 2.6 0.089 13.9 2.6 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5320) CHD5 PF04420.14 gi|568163103|ref|YP_008946419.1| - 0.1 12.4 1.2 0.15 11.9 1.2 1.3 1 0 0 1 1 1 0 CHD5-like protein DUF4337 PF14235.6 gi|568163103|ref|YP_008946419.1| - 1.8 8.7 7.7 2.5 8.2 7.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4337) Ribosomal_L29 PF00831.23 gi|568163103|ref|YP_008946419.1| - 5.3 7.1 13.5 1.1 9.3 5.8 2.1 1 1 1 2 2 2 0 Ribosomal L29 protein ABC_tran PF00005.27 gi|568163104|ref|YP_008946420.1| - 1.7e-30 106.3 0.0 2.5e-30 105.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|568163104|ref|YP_008946420.1| - 4.6e-06 26.7 2.2 0.023 14.5 0.3 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|568163104|ref|YP_008946420.1| - 0.00081 19.8 0.1 0.0018 18.7 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|568163104|ref|YP_008946420.1| - 0.0011 18.9 0.0 0.0019 18.1 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_29 PF13555.6 gi|568163104|ref|YP_008946420.1| - 0.0032 17.2 0.0 0.0066 16.2 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain Rad17 PF03215.15 gi|568163104|ref|YP_008946420.1| - 0.0052 16.7 0.1 0.014 15.3 0.0 1.8 1 1 0 1 1 1 1 Rad17 P-loop domain AAA_23 PF13476.6 gi|568163104|ref|YP_008946420.1| - 0.011 16.2 0.0 0.017 15.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|568163104|ref|YP_008946420.1| - 0.014 15.7 0.2 0.14 12.5 0.1 2.1 2 1 0 2 2 2 0 AAA domain SMC_N PF02463.19 gi|568163104|ref|YP_008946420.1| - 0.021 14.3 0.3 5.6 6.3 0.0 2.2 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 gi|568163104|ref|YP_008946420.1| - 0.048 13.8 0.1 0.17 12.0 0.1 1.9 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_24 PF13479.6 gi|568163104|ref|YP_008946420.1| - 0.075 12.7 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain ABC_ATPase PF09818.9 gi|568163104|ref|YP_008946420.1| - 0.078 11.8 0.1 7.9 5.1 0.0 2.7 2 1 0 2 2 2 0 Predicted ATPase of the ABC class NB-ARC PF00931.22 gi|568163104|ref|YP_008946420.1| - 0.11 11.7 0.0 0.2 10.8 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain NACHT PF05729.12 gi|568163104|ref|YP_008946420.1| - 0.15 12.0 0.4 0.57 10.1 0.1 1.9 2 0 0 2 2 2 0 NACHT domain AAA_33 PF13671.6 gi|568163104|ref|YP_008946420.1| - 0.18 11.9 0.0 0.36 11.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain BPD_transp_1 PF00528.22 gi|568163105|ref|YP_008946421.1| - 7.1e-24 84.6 56.0 3.4e-15 56.2 17.9 3.2 2 1 1 3 3 3 2 Binding-protein-dependent transport system inner membrane component CPSase_L_D2 PF02786.17 gi|568163106|ref|YP_008946422.1| - 3.5e-60 203.1 0.0 5.4e-60 202.5 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_N PF00289.22 gi|568163106|ref|YP_008946422.1| - 2.1e-46 157.0 0.3 3.7e-46 156.2 0.3 1.4 1 0 0 1 1 1 1 Biotin carboxylase, N-terminal domain Biotin_carb_C PF02785.19 gi|568163106|ref|YP_008946422.1| - 5.3e-35 119.8 0.0 9.6e-35 119.0 0.0 1.4 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain Dala_Dala_lig_C PF07478.13 gi|568163106|ref|YP_008946422.1| - 4.2e-06 26.4 0.0 9.6e-06 25.3 0.0 1.5 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp PF02222.22 gi|568163106|ref|YP_008946422.1| - 0.00023 20.8 0.1 0.00085 18.9 0.0 1.9 2 0 0 2 2 2 1 ATP-grasp domain ATP-grasp_3 PF02655.14 gi|568163106|ref|YP_008946422.1| - 0.0018 18.3 0.0 0.0047 17.0 0.0 1.7 1 0 0 1 1 1 1 ATP-grasp domain Oxidored_nitro PF00148.19 gi|568163106|ref|YP_008946422.1| - 0.051 12.3 0.0 0.083 11.6 0.0 1.3 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase ATP-grasp_5 PF13549.6 gi|568163106|ref|YP_008946422.1| - 0.061 12.8 0.0 0.24 10.8 0.0 1.9 2 0 0 2 2 2 0 ATP-grasp domain Biotin_lipoyl PF00364.22 gi|568163107|ref|YP_008946423.1| - 3.8e-18 65.1 7.3 8.3e-18 64.0 3.2 2.4 2 0 0 2 2 2 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 gi|568163107|ref|YP_008946423.1| - 5.3e-16 58.2 8.0 1.4e-08 34.4 0.2 2.7 2 1 1 3 3 3 2 Biotin-lipoyl like HlyD_3 PF13437.6 gi|568163107|ref|YP_008946423.1| - 3.5e-07 30.9 2.7 0.00066 20.4 0.1 3.0 2 1 1 3 3 3 2 HlyD family secretion protein HlyD_D23 PF16576.5 gi|568163107|ref|YP_008946423.1| - 3.7e-07 29.6 1.2 0.0051 16.1 0.0 3.0 2 1 1 3 3 3 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion PTS_EIIA_1 PF00358.20 gi|568163107|ref|YP_008946423.1| - 0.00012 21.8 1.0 0.12 12.2 0.0 3.5 2 1 2 4 4 4 1 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RnfC_N PF13375.6 gi|568163107|ref|YP_008946423.1| - 0.00052 19.9 2.5 0.0035 17.3 2.5 2.1 1 1 0 1 1 1 1 RnfC Barrel sandwich hybrid domain PYNP_C PF07831.13 gi|568163107|ref|YP_008946423.1| - 0.0011 18.6 0.5 0.22 11.2 0.0 2.5 1 1 1 2 2 2 1 Pyrimidine nucleoside phosphorylase C-terminal domain YqfD PF06898.11 gi|568163107|ref|YP_008946423.1| - 0.0053 15.7 4.7 0.48 9.2 0.9 2.4 1 1 1 2 2 2 2 Putative stage IV sporulation protein YqfD QRPTase_N PF02749.16 gi|568163107|ref|YP_008946423.1| - 0.0061 16.6 0.2 0.76 9.9 0.0 3.2 2 1 1 3 3 3 1 Quinolinate phosphoribosyl transferase, N-terminal domain Peptidase_M23 PF01551.22 gi|568163107|ref|YP_008946423.1| - 0.011 15.9 1.6 1.4 9.2 1.7 3.0 1 1 1 2 2 2 0 Peptidase family M23 NQRA PF05896.11 gi|568163107|ref|YP_008946423.1| - 0.012 15.1 0.6 0.031 13.7 0.3 1.8 1 1 1 2 2 2 0 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) GCV_H PF01597.19 gi|568163107|ref|YP_008946423.1| - 0.068 13.1 0.3 0.068 13.1 0.3 2.3 3 0 0 3 3 3 0 Glycine cleavage H-protein DUF2118 PF09891.9 gi|568163107|ref|YP_008946423.1| - 0.091 12.7 1.8 0.26 11.2 1.4 2.2 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2118) Pox_vIL-18BP PF05566.12 gi|568163107|ref|YP_008946423.1| - 0.14 12.4 0.2 1.5 9.0 0.1 2.3 1 1 1 2 2 2 0 Orthopoxvirus interleukin 18 binding protein Carboxyl_trans PF01039.22 gi|568163108|ref|YP_008946424.1| - 1.1e-180 601.5 0.8 1.3e-180 601.3 0.8 1.0 1 0 0 1 1 1 1 Carboxyl transferase domain MdcE PF06833.11 gi|568163108|ref|YP_008946424.1| - 0.00067 19.2 0.5 0.0025 17.4 0.0 2.1 2 1 1 3 3 3 1 Malonate decarboxylase gamma subunit (MdcE) DEAD PF00270.29 gi|568163109|ref|YP_008946425.1| - 1.4e-23 83.5 0.0 7.5e-22 77.9 0.0 2.9 3 0 0 3 3 3 1 DEAD/DEAH box helicase ResIII PF04851.15 gi|568163109|ref|YP_008946425.1| - 2.6e-12 47.1 0.0 1.2e-11 45.0 0.0 2.0 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 gi|568163109|ref|YP_008946425.1| - 2.1e-09 37.7 0.2 2e-07 31.3 0.6 3.4 3 1 0 3 3 3 1 Helicase conserved C-terminal domain HHH_5 PF14520.6 gi|568163109|ref|YP_008946425.1| - 6.2e-05 23.5 0.2 0.00033 21.2 0.2 2.4 1 0 0 1 1 1 1 Helix-hairpin-helix domain DNA_pol_lambd_f PF10391.9 gi|568163109|ref|YP_008946425.1| - 0.0057 16.5 0.0 0.02 14.7 0.0 1.9 2 0 0 2 2 2 1 Fingers domain of DNA polymerase lambda SNF2_N PF00176.23 gi|568163109|ref|YP_008946425.1| - 0.034 12.9 0.0 0.1 11.3 0.0 1.7 2 0 0 2 2 2 0 SNF2 family N-terminal domain Cdd1 PF11731.8 gi|568163109|ref|YP_008946425.1| - 0.045 14.0 0.0 0.11 12.7 0.0 1.7 1 0 0 1 1 1 0 Pathogenicity locus ATPase PF06745.13 gi|568163109|ref|YP_008946425.1| - 0.064 12.6 0.0 0.14 11.5 0.0 1.5 1 0 0 1 1 1 0 KaiC RHH_1 PF01402.21 gi|568163110|ref|YP_008946426.1| - 1e-09 38.0 0.1 1.5e-09 37.4 0.1 1.3 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family RHH_8 PF17723.1 gi|568163110|ref|YP_008946426.1| - 0.01 16.0 0.2 0.015 15.5 0.2 1.4 1 1 0 1 1 1 0 Ribbon-Helix-Helix transcriptional regulator family VapB_antitoxin PF09957.9 gi|568163110|ref|YP_008946426.1| - 0.05 13.5 0.2 0.1 12.5 0.2 1.6 1 1 0 1 1 1 0 Bacterial antitoxin of type II TA system, VapB PHO4 PF01384.20 gi|568163111|ref|YP_008946427.1| - 1.1e-24 87.2 40.2 5.9e-23 81.5 37.6 2.9 1 1 0 1 1 1 1 Phosphate transporter family MazG-like PF12643.7 gi|568163111|ref|YP_008946427.1| - 0.06 13.6 0.5 29 5.0 0.0 3.2 3 0 0 3 3 3 0 MazG-like family PhoU_div PF01865.16 gi|568163112|ref|YP_008946428.1| - 2.8e-09 36.6 10.9 5.3e-09 35.7 10.9 1.4 1 1 0 1 1 1 1 Protein of unknown function DUF47 FANCI_S1 PF14675.6 gi|568163112|ref|YP_008946428.1| - 0.012 15.2 4.7 0.1 12.1 4.7 2.0 1 1 0 1 1 1 0 FANCI solenoid 1 TruB_C_2 PF16198.5 gi|568163112|ref|YP_008946428.1| - 0.014 15.5 2.2 0.044 13.9 0.2 2.7 2 1 1 3 3 3 0 tRNA pseudouridylate synthase B C-terminal domain hnRNP_Q_AcD PF18360.1 gi|568163112|ref|YP_008946428.1| - 0.31 11.0 3.0 24 5.0 0.1 3.6 4 0 0 4 4 4 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain DUF763 PF05559.11 gi|568163113|ref|YP_008946429.1| - 2.8e-124 414.4 0.0 3.2e-124 414.2 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF763) CLAG PF03805.13 gi|568163113|ref|YP_008946429.1| - 0.14 9.7 1.0 0.2 9.2 1.0 1.1 1 0 0 1 1 1 0 Cytoadherence-linked asexual protein Metallophos PF00149.28 gi|568163114|ref|YP_008946430.1| - 4.4e-10 40.4 0.2 5.3e-10 40.1 0.2 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|568163114|ref|YP_008946430.1| - 1.4e-09 38.4 0.0 4.2e-09 36.8 0.0 1.7 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain OrfB_Zn_ribbon PF07282.11 gi|568163115|ref|YP_008946431.1| - 1.2e-19 69.9 0.0 2.4e-19 69.0 0.0 1.5 1 0 0 1 1 1 1 Putative transposase DNA-binding domain RuvC_1 PF18516.1 gi|568163115|ref|YP_008946431.1| - 0.0011 18.2 0.2 2.8 7.1 0.0 3.0 3 0 0 3 3 3 2 RuvC nuclease domain OrfB_IS605 PF01385.19 gi|568163115|ref|YP_008946431.1| - 0.0092 16.2 0.0 0.019 15.2 0.0 1.5 1 0 0 1 1 1 1 Probable transposase DZR PF12773.7 gi|568163115|ref|YP_008946431.1| - 0.025 14.6 0.8 0.044 13.8 0.8 1.4 1 0 0 1 1 1 0 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|568163115|ref|YP_008946431.1| - 0.036 13.8 2.0 5.6 6.8 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|568163115|ref|YP_008946431.1| - 0.071 12.5 2.4 3.2 7.3 0.2 2.4 2 0 0 2 2 2 0 zinc-ribbon domain Rubredoxin_2 PF18073.1 gi|568163115|ref|YP_008946431.1| - 0.082 12.6 4.4 0.6 9.9 4.9 2.0 1 1 1 2 2 2 0 Rubredoxin metal binding domain UPF0547 PF10571.9 gi|568163115|ref|YP_008946431.1| - 1.3 9.1 3.9 21 5.3 0.1 2.3 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 GATase_4 PF13230.6 gi|568163116|ref|YP_008946432.1| - 8.8e-08 31.4 0.0 1.2e-07 31.0 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferases class-II Lactamase_B_2 PF12706.7 gi|568163117|ref|YP_008946433.1| - 2.7e-14 53.2 0.0 4.1e-14 52.6 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|568163117|ref|YP_008946433.1| - 5.5e-11 42.8 0.3 1.5e-10 41.4 0.3 1.6 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.6 gi|568163117|ref|YP_008946433.1| - 3.1e-05 23.9 0.0 5e-05 23.3 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain PfkB PF00294.24 gi|568163118|ref|YP_008946434.1| - 1.1e-51 176.0 0.0 1.7e-51 175.3 0.0 1.2 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 gi|568163118|ref|YP_008946434.1| - 2.9e-08 33.4 0.0 4.3e-08 32.8 0.0 1.2 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase Carb_kinase PF01256.17 gi|568163118|ref|YP_008946434.1| - 0.022 14.3 0.0 0.035 13.6 0.0 1.2 1 0 0 1 1 1 0 Carbohydrate kinase Phos_pyr_kin PF08543.12 gi|568163119|ref|YP_008946435.1| - 3.4e-82 275.5 0.3 5.7e-82 274.8 0.3 1.4 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase PfkB PF00294.24 gi|568163119|ref|YP_008946435.1| - 5.6e-14 52.1 0.1 1.1e-13 51.1 0.1 1.4 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Carb_kinase PF01256.17 gi|568163119|ref|YP_008946435.1| - 3.2e-08 33.3 1.3 5.7e-08 32.5 1.3 1.5 1 1 0 1 1 1 1 Carbohydrate kinase PDDEXK_1 PF12705.7 gi|568163120|ref|YP_008946436.1| - 7.4e-13 49.0 1.2 1.8e-09 37.9 0.7 2.5 1 1 1 2 2 2 2 PD-(D/E)XK nuclease superfamily PDDEXK_3 PF13366.6 gi|568163120|ref|YP_008946436.1| - 7.6e-08 32.7 0.1 1.5e-07 31.8 0.1 1.5 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily Cas_Cas4 PF01930.17 gi|568163120|ref|YP_008946436.1| - 8e-08 32.5 0.0 1e-07 32.2 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF83 Chordopox_G2 PF05796.12 gi|568163120|ref|YP_008946436.1| - 0.086 12.3 0.0 0.13 11.7 0.0 1.4 1 0 0 1 1 1 0 Chordopoxvirus protein G2 AHJR-like PF18743.1 gi|568163120|ref|YP_008946436.1| - 0.12 11.9 0.1 0.23 11.0 0.1 1.4 1 0 0 1 1 1 0 REase_AHJR-like Glyco_tranf_2_3 PF13641.6 gi|568163121|ref|YP_008946437.1| - 2.5e-33 115.9 0.0 3.3e-33 115.5 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_2 PF00535.26 gi|568163121|ref|YP_008946437.1| - 8.2e-27 94.1 0.1 1.2e-26 93.6 0.1 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.6 gi|568163121|ref|YP_008946437.1| - 5.3e-24 85.2 0.4 8.2e-24 84.6 0.4 1.3 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_transf_21 PF13506.6 gi|568163121|ref|YP_008946437.1| - 6.4e-13 48.5 0.0 1.6e-12 47.2 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferase family 21 Glyco_tranf_2_2 PF10111.9 gi|568163121|ref|YP_008946437.1| - 4.3e-07 29.7 0.7 5.3e-06 26.1 0.7 2.0 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|568163121|ref|YP_008946437.1| - 7.1e-06 26.5 0.0 1.3e-05 25.7 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 GNT-I PF03071.15 gi|568163121|ref|YP_008946437.1| - 0.0011 17.8 0.1 0.0016 17.3 0.1 1.1 1 0 0 1 1 1 1 GNT-I family DNA_PPF PF02916.15 gi|568163121|ref|YP_008946437.1| - 0.078 13.4 0.2 0.078 13.4 0.2 1.9 2 0 0 2 2 2 0 DNA polymerase processivity factor DUF3363 PF11843.8 gi|568163121|ref|YP_008946437.1| - 0.14 11.1 0.0 0.19 10.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3363) Lactamase_B PF00753.27 gi|568163123|ref|YP_008946439.1| - 2.3e-09 37.6 0.3 9.8e-08 32.2 0.3 2.2 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.6 gi|568163123|ref|YP_008946439.1| - 3.2e-07 30.4 0.0 4.8e-07 29.8 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|568163123|ref|YP_008946439.1| - 2.3e-05 24.0 0.0 3.9e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain DHH PF01368.20 gi|568163123|ref|YP_008946439.1| - 0.019 15.2 0.1 0.24 11.7 0.0 2.2 2 0 0 2 2 2 0 DHH family VIT1 PF01988.19 gi|568163124|ref|YP_008946440.1| - 3.9e-47 160.9 1.3 4.5e-47 160.7 1.3 1.0 1 0 0 1 1 1 1 VIT family DUF4781 PF16013.5 gi|568163124|ref|YP_008946440.1| - 0.036 12.9 0.0 0.27 10.0 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4781) DUF2207 PF09972.9 gi|568163124|ref|YP_008946440.1| - 0.44 9.3 3.5 0.36 9.6 2.4 1.4 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) Wzy_C PF04932.15 gi|568163124|ref|YP_008946440.1| - 1.6 8.4 7.9 1.8 8.2 4.9 2.3 2 1 0 2 2 2 0 O-Antigen ligase AAA_assoc_C PF09821.9 gi|568163125|ref|YP_008946441.1| - 1.5e-27 96.4 0.8 1.7e-27 96.3 0.2 1.4 2 0 0 2 2 2 1 C-terminal AAA-associated domain Glyco_hydro_80 PF13647.6 gi|568163125|ref|YP_008946441.1| - 0.0056 16.2 0.0 0.0077 15.8 0.0 1.1 1 0 0 1 1 1 1 Glycosyl hydrolase family 80 of chitosanase A QueC PF06508.13 gi|568163126|ref|YP_008946442.1| - 4.1e-60 202.9 0.0 6e-60 202.3 0.0 1.2 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC GATase_7 PF13537.6 gi|568163126|ref|YP_008946442.1| - 1.3e-15 57.4 0.0 3.4e-15 56.1 0.0 1.7 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 gi|568163126|ref|YP_008946442.1| - 4.7e-10 39.8 0.0 8.9e-10 38.9 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain ThiI PF02568.14 gi|568163126|ref|YP_008946442.1| - 3e-08 33.5 0.1 1.5e-07 31.2 0.1 2.2 1 1 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) tRNA_Me_trans PF03054.16 gi|568163126|ref|YP_008946442.1| - 7.3e-06 25.0 0.0 2.4e-05 23.3 0.0 1.8 2 0 0 2 2 2 1 tRNA methyl transferase ATP_bind_3 PF01171.20 gi|568163126|ref|YP_008946442.1| - 0.00045 20.0 0.0 0.00072 19.4 0.0 1.3 1 0 0 1 1 1 1 PP-loop family Asn_synthase PF00733.21 gi|568163126|ref|YP_008946442.1| - 0.049 13.3 0.0 0.083 12.5 0.0 1.2 1 0 0 1 1 1 0 Asparagine synthase TpcC PF12642.7 gi|568163126|ref|YP_008946442.1| - 0.068 12.9 0.1 0.19 11.5 0.0 1.7 1 1 1 2 2 2 0 Conjugative transposon protein TcpC Glyco_transf_4 PF13439.6 gi|568163126|ref|YP_008946442.1| - 0.19 11.7 0.9 0.46 10.5 0.2 2.0 2 1 0 2 2 2 0 Glycosyltransferase Family 4 DEAD PF00270.29 gi|568163127|ref|YP_008946443.1| - 3.7e-24 85.5 0.0 3.2e-23 82.4 0.0 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|568163127|ref|YP_008946443.1| - 1.7e-20 73.4 0.0 7e-18 65.0 0.0 2.7 2 0 0 2 2 2 2 Helicase conserved C-terminal domain DUF1998 PF09369.10 gi|568163127|ref|YP_008946443.1| - 6.7e-11 42.8 0.1 2.8e-10 40.8 0.1 2.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1998) ResIII PF04851.15 gi|568163127|ref|YP_008946443.1| - 4.6e-08 33.3 0.0 1.1e-07 32.0 0.0 1.6 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit SecA_DEAD PF07517.14 gi|568163127|ref|YP_008946443.1| - 0.00017 21.0 0.0 0.00031 20.1 0.0 1.3 1 0 0 1 1 1 1 SecA DEAD-like domain AAA_19 PF13245.6 gi|568163127|ref|YP_008946443.1| - 0.065 13.6 0.0 0.15 12.4 0.0 1.6 1 1 0 1 1 1 0 AAA domain TauE PF01925.19 gi|568163128|ref|YP_008946444.1| - 4e-44 151.0 25.2 4.7e-44 150.8 25.2 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE DUF3482 PF11981.8 gi|568163128|ref|YP_008946444.1| - 0.42 10.0 0.0 0.42 10.0 0.0 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF3482) DUF1634 PF07843.11 gi|568163129|ref|YP_008946445.1| - 1.7e-26 92.3 9.4 2e-26 92.0 9.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1634) DUF3098 PF11297.8 gi|568163129|ref|YP_008946445.1| - 0.0019 17.8 0.1 0.0019 17.8 0.1 2.5 2 1 1 3 3 3 1 Protein of unknown function (DUF3098) Saf_2TM PF18303.1 gi|568163129|ref|YP_008946445.1| - 0.029 13.9 0.1 0.029 13.9 0.1 2.0 2 1 0 2 2 2 0 SAVED-fused 2TM effector domain Mem_trans PF03547.18 gi|568163129|ref|YP_008946445.1| - 0.54 8.6 5.1 0.14 10.5 1.2 1.8 1 1 1 2 2 2 0 Membrane transport protein Fig1 PF12351.8 gi|568163130|ref|YP_008946447.1| - 0.21 11.5 4.7 0.25 11.3 4.3 1.3 1 1 0 1 1 1 0 Ca2+ regulator and membrane fusion protein Fig1 SecE PF00584.20 gi|568163130|ref|YP_008946447.1| - 1.4 8.9 7.0 15 5.6 2.4 2.4 2 0 0 2 2 2 0 SecE/Sec61-gamma subunits of protein translocation complex SNARE_assoc PF09335.11 gi|568163131|ref|YP_008946448.1| - 9.9e-17 61.5 5.8 9.9e-17 61.5 5.8 1.6 2 0 0 2 2 2 1 SNARE associated Golgi protein CBS PF00571.28 gi|568163132|ref|YP_008946450.1| - 6.7e-28 96.9 6.8 2e-13 50.6 0.7 2.1 2 0 0 2 2 2 2 CBS domain IF3_N PF05198.16 gi|568163132|ref|YP_008946450.1| - 0.036 14.3 0.5 0.32 11.3 0.1 2.3 2 1 1 3 3 3 0 Translation initiation factor IF-3, N-terminal domain GTP_cyclohydro2 PF00925.20 gi|568163132|ref|YP_008946450.1| - 0.16 11.5 0.0 10 5.7 0.0 2.0 1 1 1 2 2 2 0 GTP cyclohydrolase II AAA_14 PF13173.6 gi|568163133|ref|YP_008946451.1| - 1.2e-05 25.4 0.0 2.5e-05 24.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 gi|568163133|ref|YP_008946451.1| - 0.00019 21.4 0.1 0.00043 20.3 0.0 1.6 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_22 PF13401.6 gi|568163133|ref|YP_008946451.1| - 0.002 18.4 0.1 0.0052 17.0 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_19 PF13245.6 gi|568163133|ref|YP_008946451.1| - 0.025 14.9 0.0 0.23 11.8 0.0 2.1 2 0 0 2 2 2 0 AAA domain RuvA_C PF07499.13 gi|568163133|ref|YP_008946451.1| - 0.1 13.1 0.0 0.24 11.9 0.0 1.7 1 0 0 1 1 1 0 RuvA, C-terminal domain PhoH PF02562.16 gi|568163133|ref|YP_008946451.1| - 0.12 11.8 0.0 0.2 11.1 0.0 1.3 1 0 0 1 1 1 0 PhoH-like protein ETF PF01012.21 gi|568163134|ref|YP_008946452.1| - 5e-34 117.8 0.1 6.8e-34 117.3 0.1 1.1 1 0 0 1 1 1 1 Electron transfer flavoprotein domain POTRA PF07244.15 gi|568163134|ref|YP_008946452.1| - 0.11 13.0 2.3 3.1 8.4 0.3 3.6 2 2 1 3 3 3 0 Surface antigen variable number repeat Nucleoporin_FG2 PF15967.5 gi|568163134|ref|YP_008946452.1| - 0.13 10.7 0.1 0.22 10.0 0.1 1.3 1 0 0 1 1 1 0 Nucleoporin FG repeated region DUF3104 PF11302.8 gi|568163134|ref|YP_008946452.1| - 0.16 11.8 0.0 0.39 10.5 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3104) ETF_alpha PF00766.19 gi|568163135|ref|YP_008946453.1| - 3.3e-32 110.3 0.4 5e-31 106.6 0.1 2.5 3 0 0 3 3 3 1 Electron transfer flavoprotein FAD-binding domain ETF PF01012.21 gi|568163135|ref|YP_008946453.1| - 3.2e-12 46.7 0.1 4.8e-12 46.1 0.1 1.3 1 0 0 1 1 1 1 Electron transfer flavoprotein domain Usp PF00582.26 gi|568163135|ref|YP_008946453.1| - 0.014 15.9 0.2 0.27 11.7 0.0 2.6 2 0 0 2 2 2 0 Universal stress protein family Oxidored_nitro PF00148.19 gi|568163135|ref|YP_008946453.1| - 0.056 12.2 0.0 0.094 11.4 0.0 1.3 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase DUF2244 PF10003.9 gi|568163135|ref|YP_008946453.1| - 0.098 12.3 0.0 0.19 11.4 0.0 1.4 2 0 0 2 2 2 0 Integral membrane protein (DUF2244) DAO PF01266.24 gi|568163136|ref|YP_008946454.1| - 7.9e-14 52.0 1.5 1.1e-06 28.4 1.3 2.1 1 1 0 2 2 2 2 FAD dependent oxidoreductase FAD_oxidored PF12831.7 gi|568163136|ref|YP_008946454.1| - 1.9e-13 50.6 0.0 2.9e-13 50.0 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|568163136|ref|YP_008946454.1| - 9.1e-12 44.8 0.6 1.5e-11 44.1 0.6 1.3 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.14 gi|568163136|ref|YP_008946454.1| - 1.5e-09 37.1 0.3 3.8e-09 35.8 0.1 1.7 2 1 0 2 2 2 1 HI0933-like protein Pyr_redox_2 PF07992.14 gi|568163136|ref|YP_008946454.1| - 5.9e-08 32.3 0.4 9.8e-06 25.0 0.5 2.4 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|568163136|ref|YP_008946454.1| - 9.6e-08 31.6 0.0 1.5e-07 31.0 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.6 gi|568163136|ref|YP_008946454.1| - 3.5e-07 30.4 2.1 8.4e-06 25.9 1.6 2.9 3 0 0 3 3 3 1 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.6 gi|568163136|ref|YP_008946454.1| - 3e-06 26.7 2.1 0.0049 16.2 1.8 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.14 gi|568163136|ref|YP_008946454.1| - 3.7e-06 26.1 2.1 0.00019 20.4 0.0 2.8 2 1 1 3 3 3 1 Tryptophan halogenase Thi4 PF01946.17 gi|568163136|ref|YP_008946454.1| - 7.5e-06 25.4 0.8 1.8e-05 24.1 0.8 1.6 1 0 0 1 1 1 1 Thi4 family GIDA PF01134.22 gi|568163136|ref|YP_008946454.1| - 2.6e-05 23.5 1.0 5.4e-05 22.5 1.0 1.5 1 0 0 1 1 1 1 Glucose inhibited division protein A Lycopene_cycl PF05834.12 gi|568163136|ref|YP_008946454.1| - 3.4e-05 23.1 1.0 0.00035 19.7 1.0 2.0 1 1 0 1 1 1 1 Lycopene cyclase protein Pyr_redox PF00070.27 gi|568163136|ref|YP_008946454.1| - 0.0025 18.3 3.2 0.021 15.4 1.4 3.0 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|568163136|ref|YP_008946454.1| - 0.0073 15.6 0.8 0.017 14.4 0.3 1.7 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain Fer4_10 PF13237.6 gi|568163137|ref|YP_008946455.1| - 8.5e-07 29.0 6.7 1.1e-06 28.7 6.7 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|568163137|ref|YP_008946455.1| - 1.8e-06 28.0 4.5 2.4e-06 27.6 4.5 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|568163137|ref|YP_008946455.1| - 1.9e-06 28.3 5.4 0.015 15.9 2.1 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|568163137|ref|YP_008946455.1| - 5.5e-06 26.2 9.2 0.00017 21.4 3.1 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_11 PF13247.6 gi|568163137|ref|YP_008946455.1| - 5.5e-06 26.4 0.8 6.2e-06 26.3 0.8 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|568163137|ref|YP_008946455.1| - 0.00017 21.5 10.8 0.0064 16.5 2.3 2.8 2 1 0 2 2 2 2 4Fe-4S binding domain ETF_QO PF05187.13 gi|568163137|ref|YP_008946455.1| - 0.00018 21.6 4.6 0.0008 19.5 4.6 1.8 1 1 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_20 PF14691.6 gi|568163137|ref|YP_008946455.1| - 0.0005 19.8 5.8 0.0059 16.4 1.8 2.1 1 1 1 2 2 2 2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_16 PF13484.6 gi|568163137|ref|YP_008946455.1| - 0.0053 17.7 3.0 2.5 9.1 0.7 2.2 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|568163137|ref|YP_008946455.1| - 0.013 15.6 8.8 0.92 9.7 3.2 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|568163137|ref|YP_008946455.1| - 0.014 15.8 2.3 1.8 9.1 0.5 2.1 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|568163137|ref|YP_008946455.1| - 0.067 13.7 11.3 0.3 11.7 2.2 2.7 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4 PF00037.27 gi|568163137|ref|YP_008946455.1| - 0.098 12.5 15.4 0.39 10.6 2.6 4.0 3 1 0 3 3 3 0 4Fe-4S binding domain Fer4_3 PF12798.7 gi|568163137|ref|YP_008946455.1| - 0.61 11.1 12.1 3.7 8.7 4.1 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Phosphorylase PF00343.20 gi|568163138|ref|YP_008946456.1| - 2.5e-12 45.9 0.1 5.3e-11 41.5 0.0 2.3 1 1 1 2 2 2 2 Carbohydrate phosphorylase Glycos_transf_1 PF00534.20 gi|568163138|ref|YP_008946456.1| - 1.2e-08 34.7 0.0 2.5e-08 33.6 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 MFS_1 PF07690.16 gi|568163139|ref|YP_008946457.1| - 4e-27 95.1 49.8 9.7e-21 74.1 22.3 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|568163139|ref|YP_008946457.1| - 2.7e-11 43.0 28.4 9e-11 41.2 28.4 1.8 1 1 0 1 1 1 1 MFS_1 like family Sugar_tr PF00083.24 gi|568163139|ref|YP_008946457.1| - 0.00012 21.1 30.5 0.00026 20.0 17.3 2.4 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_3 PF05977.13 gi|568163139|ref|YP_008946457.1| - 0.0064 14.9 8.4 0.11 10.8 1.5 2.3 2 0 0 2 2 2 2 Transmembrane secretion effector TMEM72 PF16054.5 gi|568163139|ref|YP_008946457.1| - 2.3 7.9 11.1 0.078 12.7 3.0 2.5 3 0 0 3 3 3 0 Transmembrane protein family 72 DUF3463 PF11946.8 gi|568163140|ref|YP_008946459.1| - 1.2e-32 112.5 2.6 1.8e-32 111.9 2.6 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3463) Radical_SAM PF04055.21 gi|568163140|ref|YP_008946459.1| - 1.4e-16 61.4 0.0 5.2e-16 59.5 0.0 1.9 2 1 1 3 3 3 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|568163140|ref|YP_008946459.1| - 1.4e-08 35.1 0.6 4e-07 30.4 0.0 2.5 3 0 0 3 3 3 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|568163140|ref|YP_008946459.1| - 0.0011 19.1 0.9 0.013 15.6 0.0 2.5 3 0 0 3 3 3 1 4Fe-4S single cluster domain MraZ PF02381.18 gi|568163140|ref|YP_008946459.1| - 0.046 13.7 0.1 0.097 12.7 0.1 1.5 1 0 0 1 1 1 0 MraZ protein, putative antitoxin-like Deltameth_res PF16020.5 gi|568164756|ref|YP_008946460.1| - 0.099 12.5 0.5 4.2 7.3 0.2 2.2 2 0 0 2 2 2 0 Deltamethrin resistance ECF_trnsprt PF12822.7 gi|568164756|ref|YP_008946460.1| - 1.4 8.9 15.3 1.7 8.7 15.3 1.0 1 0 0 1 1 1 0 ECF transporter, substrate-specific component DUF1694 PF07997.11 gi|568164757|ref|YP_008946461.1| - 0.092 12.8 0.4 0.53 10.4 0.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1694) ALO PF04030.14 gi|568164757|ref|YP_008946461.1| - 0.099 12.4 0.1 12 5.7 0.0 2.1 2 0 0 2 2 2 0 D-arabinono-1,4-lactone oxidase DUF4064 PF13273.6 gi|568164757|ref|YP_008946461.1| - 0.11 12.8 3.5 0.24 11.7 3.2 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF4064) FAD-oxidase_C PF02913.19 gi|568163141|ref|YP_008946462.1| - 2e-44 152.1 0.0 3.2e-44 151.4 0.0 1.3 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 gi|568163141|ref|YP_008946462.1| - 5e-43 146.2 0.0 1e-42 145.2 0.0 1.5 1 0 0 1 1 1 1 FAD binding domain Phage_Arf PF17585.2 gi|568163141|ref|YP_008946462.1| - 0.021 14.8 0.0 0.11 12.5 0.0 2.1 2 0 0 2 2 2 0 Accessory recombination function protein DUF4872 PF16169.5 gi|568163141|ref|YP_008946462.1| - 0.051 13.3 0.0 0.11 12.3 0.0 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4872) CTP_transf_like PF01467.26 gi|568163142|ref|YP_008946463.1| - 8.6e-14 51.9 0.0 1.2e-13 51.4 0.0 1.2 1 0 0 1 1 1 1 Cytidylyltransferase-like HIGH_NTase1 PF05636.11 gi|568163142|ref|YP_008946463.1| - 0.029 13.6 0.0 2.1 7.5 0.0 2.2 2 0 0 2 2 2 0 HIGH Nucleotidyl Transferase DUF981 PF06168.11 gi|568163143|ref|YP_008946464.1| - 5.8e-54 182.9 20.6 6.5e-54 182.7 20.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF981) DUF2427 PF10348.9 gi|568163143|ref|YP_008946464.1| - 0.027 14.3 3.7 0.15 11.9 1.0 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF2427) TssN PF17555.2 gi|568163143|ref|YP_008946464.1| - 0.26 10.6 16.7 0.44 9.9 10.4 2.1 1 1 1 2 2 2 0 Type VI secretion system, TssN DUF3188 PF11384.8 gi|568163143|ref|YP_008946464.1| - 0.3 10.8 0.1 0.3 10.8 0.1 3.3 2 1 0 3 3 3 0 Protein of unknown function (DUF3188) HAD_2 PF13419.6 gi|568163144|ref|YP_008946465.1| - 1.7e-12 47.8 0.1 4.9e-12 46.3 0.1 1.7 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|568163144|ref|YP_008946465.1| - 0.00073 19.5 0.0 0.0012 18.9 0.0 1.3 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase PF00702.26 gi|568163144|ref|YP_008946465.1| - 0.029 14.7 0.0 1.7 8.9 0.0 2.1 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase PSII PF00421.19 gi|568163144|ref|YP_008946465.1| - 0.035 12.8 0.0 0.047 12.4 0.0 1.1 1 0 0 1 1 1 0 Photosystem II protein SF3A3 PF16837.5 gi|568163144|ref|YP_008946465.1| - 0.067 13.7 0.1 7.6 7.1 0.0 2.6 1 1 0 2 2 2 0 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 MIase PF02426.16 gi|568163145|ref|YP_008946466.1| - 9.7e-18 64.1 0.0 1.2e-17 63.8 0.0 1.1 1 0 0 1 1 1 1 Muconolactone delta-isomerase GYD PF08734.11 gi|568163145|ref|YP_008946466.1| - 0.0045 16.9 0.0 0.0046 16.9 0.0 1.2 1 0 0 1 1 1 1 GYD domain SAM_Exu PF18609.1 gi|568163145|ref|YP_008946466.1| - 0.096 12.8 0.3 0.16 12.0 0.1 1.6 1 1 0 1 1 1 0 Exuperantia SAM-like domain AsnC_trans_reg PF01037.21 gi|568163145|ref|YP_008946466.1| - 0.12 12.4 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 Lrp/AsnC ligand binding domain SBP56 PF05694.11 gi|568163147|ref|YP_008946468.1| - 1.1e-203 677.2 0.0 1.2e-203 677.0 0.0 1.0 1 0 0 1 1 1 1 56kDa selenium binding protein (SBP56) Rad54_N PF08658.10 gi|568163147|ref|YP_008946468.1| - 0.12 12.5 0.0 0.22 11.7 0.0 1.3 1 0 0 1 1 1 0 Rad54 N terminal AMP-binding PF00501.28 gi|568163148|ref|YP_008946469.1| - 4.3e-89 299.0 0.0 5.3e-89 298.7 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|568163148|ref|YP_008946469.1| - 1.5e-27 96.3 2.8 7.6e-27 94.1 0.5 2.5 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain ACAS_N PF16177.5 gi|568163148|ref|YP_008946469.1| - 5.7e-20 71.0 2.2 1.4e-19 69.8 2.2 1.7 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus BPL_LplA_LipB PF03099.19 gi|568163149|ref|YP_008946470.1| - 0.00094 19.1 0.4 0.0016 18.4 0.4 1.4 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family Biotin_lipoyl PF00364.22 gi|568163150|ref|YP_008946471.1| - 7.9e-12 44.8 1.2 1.2e-11 44.2 1.2 1.3 1 0 0 1 1 1 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 gi|568163150|ref|YP_008946471.1| - 1.1e-06 28.3 5.3 0.0052 16.6 2.0 2.2 1 1 1 2 2 2 2 Biotin-lipoyl like PTS_EIIA_1 PF00358.20 gi|568163150|ref|YP_008946471.1| - 0.0021 17.8 0.4 0.81 9.5 0.0 2.0 1 1 1 2 2 2 2 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HlyD_D23 PF16576.5 gi|568163150|ref|YP_008946471.1| - 0.0032 16.7 0.3 0.078 12.2 0.2 2.0 1 1 1 2 2 2 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion GCV_H PF01597.19 gi|568163150|ref|YP_008946471.1| - 0.0038 17.1 0.1 0.0047 16.8 0.1 1.2 1 0 0 1 1 1 1 Glycine cleavage H-protein HlyD_3 PF13437.6 gi|568163150|ref|YP_008946471.1| - 0.008 16.9 1.2 3.8 8.3 0.1 2.2 2 0 0 2 2 2 2 HlyD family secretion protein RnfC_N PF13375.6 gi|568163150|ref|YP_008946471.1| - 0.034 14.1 0.3 0.071 13.1 0.2 1.5 1 1 0 1 1 1 0 RnfC Barrel sandwich hybrid domain Radical_SAM PF04055.21 gi|568163151|ref|YP_008946472.1| - 7.1e-17 62.3 0.3 1.2e-16 61.6 0.1 1.5 2 0 0 2 2 2 1 Radical SAM superfamily DUF3198 PF11433.8 gi|568163151|ref|YP_008946472.1| - 0.0025 17.7 0.2 0.0079 16.1 0.1 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF3198) Myb_DNA-bind_7 PF15963.5 gi|568163151|ref|YP_008946472.1| - 0.0079 16.1 0.0 0.038 13.9 0.0 2.0 2 0 0 2 2 2 1 Myb DNA-binding like Phage_int_SAM_6 PF18644.1 gi|568163151|ref|YP_008946472.1| - 0.092 12.8 0.2 0.23 11.5 0.1 1.7 2 0 0 2 2 2 0 Phage integrase SAM-like domain B12-binding PF02310.19 gi|568163151|ref|YP_008946472.1| - 0.11 12.5 0.3 5.1 7.1 0.1 2.6 1 1 2 3 3 3 0 B12 binding domain BPL_LplA_LipB PF03099.19 gi|568163152|ref|YP_008946473.1| - 7.8e-15 54.9 0.0 1.1e-14 54.4 0.0 1.2 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family DUF5325 PF17259.2 gi|568163153|ref|YP_008946474.1| - 0.024 14.5 0.9 0.032 14.1 0.9 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5325) MFS_1_like PF12832.7 gi|568163153|ref|YP_008946474.1| - 0.035 13.0 0.0 0.035 13.0 0.0 1.0 1 0 0 1 1 1 0 MFS_1 like family DUF4083 PF13314.6 gi|568163153|ref|YP_008946474.1| - 0.064 13.2 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4083) HpcH_HpaI PF03328.14 gi|568163154|ref|YP_008946475.1| - 4.9e-33 114.1 0.1 4.2e-31 107.8 0.1 2.1 1 1 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family C-C_Bond_Lyase PF15617.6 gi|568163154|ref|YP_008946475.1| - 8.9e-18 64.5 0.1 2.1e-09 37.0 0.0 2.1 2 0 0 2 2 2 2 C-C_Bond_Lyase of the TIM-Barrel fold PhoU PF01895.19 gi|568163154|ref|YP_008946475.1| - 0.0099 16.3 2.5 2.3 8.7 0.3 2.7 2 1 0 2 2 2 2 PhoU domain RexA PF15969.5 gi|568163154|ref|YP_008946475.1| - 0.014 15.0 0.1 0.066 12.8 0.0 1.9 2 0 0 2 2 2 0 Intracellular sensor of Lambda phage, Abi component BH4 PF02180.17 gi|568163154|ref|YP_008946475.1| - 0.074 12.9 0.1 0.17 11.7 0.1 1.6 1 0 0 1 1 1 0 Bcl-2 homology region 4 4HBT PF03061.22 gi|568163155|ref|YP_008946476.1| - 2.5e-15 56.6 0.0 3e-15 56.3 0.0 1.1 1 0 0 1 1 1 1 Thioesterase superfamily 4HBT_3 PF13622.6 gi|568163155|ref|YP_008946476.1| - 2.7e-05 24.5 0.0 3.2e-05 24.3 0.0 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily DUF4442 PF14539.6 gi|568163155|ref|YP_008946476.1| - 0.036 14.2 0.0 0.046 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4442) KH_7 PF17214.3 gi|568163156|ref|YP_008946477.1| - 0.01 15.8 0.2 0.022 14.7 0.1 1.6 2 0 0 2 2 2 0 KH domain Sep15_SelM PF08806.11 gi|568163156|ref|YP_008946477.1| - 0.16 12.1 0.0 0.31 11.2 0.0 1.5 1 0 0 1 1 1 0 Sep15/SelM redox domain ETF PF01012.21 gi|568163157|ref|YP_008946478.1| - 1.8e-88 295.2 0.2 7.5e-46 156.3 0.6 2.1 2 0 0 2 2 2 2 Electron transfer flavoprotein domain ETF_alpha PF00766.19 gi|568163157|ref|YP_008946478.1| - 1.7e-33 114.5 0.2 4.7e-33 113.1 0.2 1.8 1 0 0 1 1 1 1 Electron transfer flavoprotein FAD-binding domain GatB_Yqey PF02637.18 gi|568163157|ref|YP_008946478.1| - 0.029 14.3 0.2 0.19 11.6 0.2 2.1 1 1 0 1 1 1 0 GatB domain DAO PF01266.24 gi|568163158|ref|YP_008946479.1| - 4.3e-14 52.9 1.0 1.4e-06 28.1 0.2 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|568163158|ref|YP_008946479.1| - 1.2e-10 40.7 5.1 2e-08 33.3 1.2 2.2 2 0 0 2 2 2 2 HI0933-like protein FAD_oxidored PF12831.7 gi|568163158|ref|YP_008946479.1| - 9.6e-10 38.4 1.0 1.3e-09 37.9 1.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|568163158|ref|YP_008946479.1| - 4.6e-09 35.9 4.5 1e-07 31.5 4.5 2.1 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|568163158|ref|YP_008946479.1| - 9.6e-09 34.8 1.7 1.9e-08 33.8 1.7 1.5 1 0 0 1 1 1 1 FAD binding domain GIDA PF01134.22 gi|568163158|ref|YP_008946479.1| - 2.2e-07 30.3 3.2 6.5e-07 28.8 3.2 1.7 1 1 0 1 1 1 1 Glucose inhibited division protein A Pyr_redox_3 PF13738.6 gi|568163158|ref|YP_008946479.1| - 1.2e-06 28.0 3.0 5.1e-06 26.0 3.0 1.9 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|568163158|ref|YP_008946479.1| - 2.4e-06 27.7 0.1 4.6e-06 26.8 0.1 1.4 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 gi|568163158|ref|YP_008946479.1| - 2e-05 24.1 1.1 0.00042 19.7 1.5 2.3 2 1 0 2 2 2 1 FAD binding domain Lycopene_cycl PF05834.12 gi|568163158|ref|YP_008946479.1| - 6.4e-05 22.2 1.6 0.00017 20.8 1.6 1.6 1 1 0 1 1 1 1 Lycopene cyclase protein Thi4 PF01946.17 gi|568163158|ref|YP_008946479.1| - 8.1e-05 22.0 0.1 0.00015 21.1 0.1 1.5 1 0 0 1 1 1 1 Thi4 family AlaDh_PNT_C PF01262.21 gi|568163158|ref|YP_008946479.1| - 0.0002 20.7 0.1 0.00068 19.0 0.1 1.8 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox PF00070.27 gi|568163158|ref|YP_008946479.1| - 0.00037 21.0 1.2 0.28 11.8 0.1 2.6 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 gi|568163158|ref|YP_008946479.1| - 0.059 13.4 1.8 0.94 9.4 0.1 2.2 2 0 0 2 2 2 0 FAD-NAD(P)-binding ETF_QO PF05187.13 gi|568163159|ref|YP_008946480.1| - 1.1e-12 48.0 1.4 1.3e-12 47.8 1.4 1.0 1 0 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_10 PF13237.6 gi|568163159|ref|YP_008946480.1| - 2.2e-07 30.9 23.2 3e-05 24.0 12.8 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|568163159|ref|YP_008946480.1| - 3e-07 30.5 9.6 6.1e-07 29.5 9.8 1.4 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|568163159|ref|YP_008946480.1| - 1.1e-06 28.2 18.2 3e-06 26.8 4.2 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|568163159|ref|YP_008946480.1| - 1.4e-06 28.8 23.7 0.00022 21.8 13.1 2.2 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|568163159|ref|YP_008946480.1| - 3.3e-06 26.9 13.3 0.00012 21.9 3.1 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|568163159|ref|YP_008946480.1| - 2.2e-05 24.6 11.3 6.5e-05 23.1 2.0 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_6 PF12837.7 gi|568163159|ref|YP_008946480.1| - 0.00017 21.5 19.2 0.0046 17.0 4.2 2.8 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|568163159|ref|YP_008946480.1| - 0.00099 19.5 7.1 0.0041 17.5 0.5 2.3 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|568163159|ref|YP_008946480.1| - 0.0026 17.9 12.2 0.006 16.7 12.2 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|568163159|ref|YP_008946480.1| - 0.0058 17.5 12.1 0.25 12.4 3.7 2.4 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|568163159|ref|YP_008946480.1| - 0.012 16.5 0.9 0.012 16.5 0.9 3.0 2 1 1 3 3 3 0 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|568163159|ref|YP_008946480.1| - 0.18 12.4 11.5 14 6.4 12.4 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain FdhD-NarQ PF02634.15 gi|568163160|ref|YP_008946481.1| - 2.2e-75 253.4 0.0 2.5e-75 253.2 0.0 1.0 1 0 0 1 1 1 1 FdhD/NarQ family DUF1125 PF06563.11 gi|568163160|ref|YP_008946481.1| - 0.0055 16.6 0.4 2.4 8.1 0.0 3.4 3 0 0 3 3 3 2 Protein of unknown function (DUF1125) DUF1641 PF07849.11 gi|568163161|ref|YP_008946482.1| - 1.4e-13 50.5 0.2 2.2e-13 49.8 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1641) Thioredoxin_14 PF18402.1 gi|568163161|ref|YP_008946482.1| - 0.018 15.0 0.0 0.018 15.0 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin-like domain Radical_SAM PF04055.21 gi|568163161|ref|YP_008946482.1| - 0.033 14.5 0.0 0.065 13.6 0.0 1.4 1 0 0 1 1 1 0 Radical SAM superfamily Cdc6_C PF09079.11 gi|568163161|ref|YP_008946482.1| - 0.11 12.5 0.0 2.9 7.9 0.0 2.2 2 0 0 2 2 2 0 CDC6, C terminal winged helix domain Molybdopterin PF00384.22 gi|568163162|ref|YP_008946483.1| - 1.9e-86 290.7 0.0 2.5e-86 290.3 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 gi|568163162|ref|YP_008946483.1| - 4.2e-20 71.8 0.0 8.2e-20 70.9 0.0 1.5 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.16 gi|568163162|ref|YP_008946483.1| - 1.1e-18 66.9 0.4 1.1e-18 66.9 0.4 2.4 2 0 0 2 2 1 1 Molybdopterin oxidoreductase Fe4S4 domain Fer2_4 PF13510.6 gi|568163162|ref|YP_008946483.1| - 7.3e-13 48.4 0.2 1.9e-12 47.1 0.2 1.7 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4 PF00037.27 gi|568163162|ref|YP_008946483.1| - 4e-11 42.2 17.7 4.4e-06 26.3 3.5 3.5 3 0 0 3 3 3 2 4Fe-4S binding domain NADH-G_4Fe-4S_3 PF10588.9 gi|568163162|ref|YP_008946483.1| - 7.5e-10 38.2 0.9 7.5e-10 38.2 0.9 2.1 2 0 0 2 2 1 1 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Fer4_21 PF14697.6 gi|568163162|ref|YP_008946483.1| - 8.1e-09 35.5 6.4 8.1e-09 35.5 6.4 2.5 3 1 0 3 3 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|568163162|ref|YP_008946483.1| - 2.6e-07 30.4 18.5 0.00027 20.9 3.3 3.0 3 0 0 3 3 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|568163162|ref|YP_008946483.1| - 1e-05 26.0 12.0 1e-05 26.0 12.0 3.8 1 1 3 4 4 4 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|568163162|ref|YP_008946483.1| - 2.2e-05 24.5 16.4 0.012 15.7 0.2 3.2 3 1 0 3 3 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|568163162|ref|YP_008946483.1| - 8.2e-05 22.7 12.4 8.2e-05 22.7 12.4 3.7 3 1 1 4 4 3 2 4Fe-4S dicluster domain Fer2 PF00111.27 gi|568163162|ref|YP_008946483.1| - 0.00016 21.6 0.3 0.00016 21.6 0.3 2.6 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain TPP_enzyme_M PF00205.22 gi|568163162|ref|YP_008946483.1| - 0.00033 20.4 0.2 0.81 9.4 0.0 3.2 3 0 0 3 3 3 2 Thiamine pyrophosphate enzyme, central domain Fer4_2 PF12797.7 gi|568163162|ref|YP_008946483.1| - 0.00066 19.6 12.9 0.00096 19.1 3.4 3.3 4 0 0 4 4 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|568163162|ref|YP_008946483.1| - 0.0017 18.8 10.3 0.0017 18.8 10.3 3.0 1 1 2 3 3 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|568163162|ref|YP_008946483.1| - 0.0042 18.0 19.2 0.029 15.3 5.8 4.1 3 1 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_13 PF13370.6 gi|568163162|ref|YP_008946483.1| - 0.0059 17.1 6.6 0.54 10.8 0.1 2.8 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_18 PF13746.6 gi|568163162|ref|YP_008946483.1| - 0.02 15.1 11.9 0.023 14.9 0.5 2.8 3 0 0 3 3 2 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|568163162|ref|YP_008946483.1| - 0.038 14.5 16.4 0.095 13.3 11.1 3.3 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|568163162|ref|YP_008946483.1| - 0.051 14.3 5.9 0.7 10.7 1.6 3.0 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_4 PF12800.7 gi|568163162|ref|YP_008946483.1| - 0.88 10.2 21.6 0.061 13.9 3.7 3.2 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_3 PF12798.7 gi|568163162|ref|YP_008946483.1| - 3.8 8.7 31.1 0.067 14.2 7.8 3.3 3 0 0 3 3 2 0 4Fe-4S binding domain Ribonuc_L-PSP PF01042.21 gi|568163163|ref|YP_008946485.1| - 0.16 12.0 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 Endoribonuclease L-PSP 2_5_RNA_ligase2 PF13563.6 gi|568164759|ref|YP_008946486.1| - 4.8e-12 46.0 0.0 6.8e-12 45.6 0.0 1.2 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily FtsK_alpha PF17854.1 gi|568164759|ref|YP_008946486.1| - 0.12 12.5 0.0 0.34 11.1 0.0 1.7 1 0 0 1 1 1 0 FtsK alpha domain DUF2067 PF09840.9 gi|568163164|ref|YP_008946487.1| - 0.016 14.8 0.5 0.035 13.7 0.1 1.6 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2067) LPD14 PF18827.1 gi|568163164|ref|YP_008946487.1| - 0.036 14.3 2.8 2.2 8.6 0.2 2.0 1 1 1 2 2 2 0 Large polyvalent protein-associated domain 14 YkyA PF10368.9 gi|568163164|ref|YP_008946487.1| - 0.091 12.4 0.1 0.11 12.1 0.1 1.1 1 0 0 1 1 1 0 Putative cell-wall binding lipoprotein CBS PF00571.28 gi|568163164|ref|YP_008946487.1| - 0.095 13.2 1.6 1.5 9.3 1.6 2.3 1 1 0 1 1 1 0 CBS domain PIN PF01850.21 gi|568163165|ref|YP_008946488.1| - 4.6e-15 56.2 2.1 5.2e-15 56.0 2.1 1.0 1 0 0 1 1 1 1 PIN domain TauE PF01925.19 gi|568163166|ref|YP_008946489.1| - 1.1e-50 172.5 37.9 1.2e-50 172.3 37.9 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE CCG PF02754.16 gi|568163167|ref|YP_008946490.1| - 1.7e-29 101.9 0.1 2e-16 60.0 0.0 2.6 3 0 0 3 3 3 2 Cysteine-rich domain Fer4_8 PF13183.6 gi|568163168|ref|YP_008946491.1| - 1e-08 35.5 6.3 1.8e-08 34.7 6.3 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|568163168|ref|YP_008946491.1| - 1.3e-08 34.9 10.0 1e-07 32.0 11.0 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|568163168|ref|YP_008946491.1| - 1e-06 29.2 6.7 2.2e-06 28.1 6.9 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|568163168|ref|YP_008946491.1| - 1.4e-06 28.7 6.2 2.3e-06 28.1 6.2 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|568163168|ref|YP_008946491.1| - 3.8e-05 24.5 3.7 0.0029 18.5 0.5 2.4 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|568163168|ref|YP_008946491.1| - 0.0016 18.5 10.5 0.0064 16.6 10.7 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|568163168|ref|YP_008946491.1| - 0.011 16.6 3.9 0.72 10.7 0.2 2.3 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|568163168|ref|YP_008946491.1| - 0.04 14.4 13.9 0.46 11.1 3.5 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_21 PF14697.6 gi|568163168|ref|YP_008946491.1| - 0.046 13.9 9.1 0.26 11.5 9.1 2.0 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_20 PF14691.6 gi|568163168|ref|YP_008946491.1| - 0.05 13.4 1.2 0.05 13.4 1.2 2.2 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_2 PF12797.7 gi|568163168|ref|YP_008946491.1| - 0.17 12.0 13.2 0.13 12.5 1.6 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4 PF00037.27 gi|568163168|ref|YP_008946491.1| - 0.49 10.3 13.6 0.74 9.7 2.8 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|568163168|ref|YP_008946491.1| - 4.4 7.5 8.4 0.76 10.0 0.9 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain Acetyltransf_11 PF13720.6 gi|568163169|ref|YP_008946492.1| - 0.053 14.0 0.2 0.16 12.5 0.1 1.8 1 1 1 2 2 2 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Pyr_redox_2 PF07992.14 gi|568163170|ref|YP_008946493.1| - 1.1e-18 67.6 0.0 1.4e-18 67.1 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|568163170|ref|YP_008946493.1| - 1.5e-09 37.6 0.4 3.5e-09 36.4 0.4 1.6 1 1 1 2 2 2 1 FAD binding domain GIDA PF01134.22 gi|568163170|ref|YP_008946493.1| - 3.6e-09 36.2 0.0 6.2e-05 22.2 0.0 2.2 2 0 0 2 2 2 2 Glucose inhibited division protein A FAD_oxidored PF12831.7 gi|568163170|ref|YP_008946493.1| - 3.2e-08 33.4 0.0 6.5e-08 32.4 0.0 1.5 1 0 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|568163170|ref|YP_008946493.1| - 3.2e-08 32.7 0.5 9.4e-05 21.3 0.2 2.1 1 1 1 2 2 2 2 HI0933-like protein FAD_binding_2 PF00890.24 gi|568163170|ref|YP_008946493.1| - 3.4e-08 33.0 0.0 5.4e-07 29.0 0.1 2.0 2 0 0 2 2 2 1 FAD binding domain NAD_binding_8 PF13450.6 gi|568163170|ref|YP_008946493.1| - 1.1e-07 31.9 0.1 2.5e-07 30.8 0.1 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 gi|568163170|ref|YP_008946493.1| - 1.1e-06 29.1 1.4 3.8e-05 24.1 0.1 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|568163170|ref|YP_008946493.1| - 1.1e-06 28.0 0.0 1.8e-06 27.4 0.0 1.3 1 0 0 1 1 1 1 Thi4 family DAO PF01266.24 gi|568163170|ref|YP_008946493.1| - 9e-06 25.5 0.6 3.3e-05 23.6 0.2 2.1 1 1 1 2 2 2 1 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 gi|568163170|ref|YP_008946493.1| - 1.2e-05 24.7 0.3 3e-05 23.4 0.3 1.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 gi|568163170|ref|YP_008946493.1| - 1.9e-05 24.2 0.2 0.00088 18.7 0.0 2.4 3 0 0 3 3 3 1 Flavin containing amine oxidoreductase NAD_binding_9 PF13454.6 gi|568163170|ref|YP_008946493.1| - 0.00028 20.9 0.0 0.067 13.2 0.0 2.9 3 0 0 3 3 3 1 FAD-NAD(P)-binding Lycopene_cycl PF05834.12 gi|568163170|ref|YP_008946493.1| - 0.00056 19.1 0.0 0.00076 18.6 0.0 1.2 1 0 0 1 1 1 1 Lycopene cyclase protein AlaDh_PNT_C PF01262.21 gi|568163170|ref|YP_008946493.1| - 0.0032 16.8 0.1 0.0058 15.9 0.1 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_7 PF13241.6 gi|568163170|ref|YP_008946493.1| - 0.013 15.9 0.1 0.03 14.7 0.1 1.7 1 1 0 1 1 1 0 Putative NAD(P)-binding ThiF PF00899.21 gi|568163170|ref|YP_008946493.1| - 0.038 13.3 0.3 0.067 12.5 0.3 1.3 1 0 0 1 1 1 0 ThiF family Trp_halogenase PF04820.14 gi|568163170|ref|YP_008946493.1| - 0.064 12.1 0.1 0.11 11.4 0.1 1.3 1 0 0 1 1 1 0 Tryptophan halogenase TrkA_N PF02254.18 gi|568163170|ref|YP_008946493.1| - 0.12 12.6 0.0 0.28 11.5 0.0 1.6 1 0 0 1 1 1 0 TrkA-N domain 2-Hacid_dh_C PF02826.19 gi|568163170|ref|YP_008946493.1| - 0.13 11.6 0.0 0.2 11.0 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 gi|568163170|ref|YP_008946493.1| - 0.13 12.3 0.1 0.26 11.4 0.1 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase K_oxygenase PF13434.6 gi|568163170|ref|YP_008946493.1| - 0.15 11.2 0.1 2 7.5 0.0 2.2 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) CCG PF02754.16 gi|568163171|ref|YP_008946494.1| - 1.8e-08 34.5 0.0 9e-07 29.0 0.0 2.9 2 2 0 2 2 2 1 Cysteine-rich domain TusA PF01206.17 gi|568163172|ref|YP_008946495.1| - 7.1e-12 45.0 0.0 7.9e-12 44.8 0.0 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA Pyr_redox_2 PF07992.14 gi|568163173|ref|YP_008946496.1| - 2.5e-12 46.7 0.0 3.2e-11 43.0 0.0 2.0 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase DrsE PF02635.15 gi|568163174|ref|YP_008946497.1| - 1.8e-10 41.2 0.1 2.2e-10 40.9 0.1 1.1 1 0 0 1 1 1 1 DsrE/DsrF-like family DrsE_2 PF13686.6 gi|568163174|ref|YP_008946497.1| - 1.2e-06 28.5 0.8 3.2e-06 27.1 0.8 1.6 1 1 0 1 1 1 1 DsrE/DsrF/DrsH-like family Methyltrn_RNA_2 PF04013.12 gi|568163174|ref|YP_008946497.1| - 0.039 13.7 0.0 0.044 13.5 0.0 1.0 1 0 0 1 1 1 0 Putative SAM-dependent RNA methyltransferase DUF1641 PF07849.11 gi|568163175|ref|YP_008946498.1| - 1e-15 57.3 1.7 1.2e-14 53.9 0.1 3.3 3 1 1 4 4 4 1 Protein of unknown function (DUF1641) Syntaxin_2 PF14523.6 gi|568163175|ref|YP_008946498.1| - 0.00074 19.8 4.8 0.46 10.9 0.2 3.5 1 1 1 3 3 3 2 Syntaxin-like protein ARTD15_N PF18084.1 gi|568163175|ref|YP_008946498.1| - 0.047 13.9 2.1 0.75 10.1 0.1 3.1 2 1 1 3 3 3 0 ARTD15 N-terminal domain UbiD PF01977.16 gi|568163175|ref|YP_008946498.1| - 0.064 12.1 0.0 1 8.1 0.0 2.1 1 1 1 2 2 2 0 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Birna_VP3 PF01767.16 gi|568163175|ref|YP_008946498.1| - 0.14 12.2 0.3 1.6 8.8 0.0 2.4 1 1 0 2 2 2 0 Birnavirus VP3 protein DUF773 PF05600.12 gi|568163175|ref|YP_008946498.1| - 0.28 9.9 4.7 3.1 6.4 1.0 2.2 1 1 1 2 2 2 0 CDK5 regulatory subunit-associated protein 3 DUF3886 PF13025.6 gi|568163175|ref|YP_008946498.1| - 0.37 11.0 9.3 1.4 9.2 0.5 4.1 5 0 0 5 5 5 0 Protein of unknown function (DUF3886) Fer4_17 PF13534.6 gi|568163176|ref|YP_008946499.1| - 1.1e-07 32.3 7.0 2.2e-07 31.3 7.0 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|568163176|ref|YP_008946499.1| - 1.6e-07 31.7 14.9 1.7e-06 28.4 7.4 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|568163176|ref|YP_008946499.1| - 1.3e-06 28.5 6.2 2.6e-06 27.4 6.2 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|568163176|ref|YP_008946499.1| - 2.6e-06 27.5 8.7 2.7e-05 24.2 9.7 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|568163176|ref|YP_008946499.1| - 3.1e-05 24.4 9.2 8.3e-05 23.1 9.5 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|568163176|ref|YP_008946499.1| - 0.00052 20.9 8.4 0.0018 19.1 8.4 2.0 1 1 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|568163176|ref|YP_008946499.1| - 0.0021 18.1 13.4 0.025 14.7 3.6 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|568163176|ref|YP_008946499.1| - 0.0026 18.2 10.7 0.0044 17.4 1.1 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_20 PF14691.6 gi|568163176|ref|YP_008946499.1| - 0.04 13.7 5.9 0.076 12.8 0.3 2.3 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SHOCT PF09851.9 gi|568163176|ref|YP_008946499.1| - 0.047 13.5 2.6 0.061 13.1 1.2 2.0 1 1 1 2 2 2 0 Short C-terminal domain Fer4_21 PF14697.6 gi|568163176|ref|YP_008946499.1| - 0.086 13.0 9.6 0.93 9.7 9.7 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|568163176|ref|YP_008946499.1| - 0.17 12.0 12.9 1.1 9.5 2.1 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4 PF00037.27 gi|568163176|ref|YP_008946499.1| - 0.37 10.7 16.9 0.17 11.8 2.8 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|568163176|ref|YP_008946499.1| - 1.3 9.3 4.9 13 6.0 0.5 2.4 1 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|568163176|ref|YP_008946499.1| - 6.4 7.7 12.5 5.1 8.0 2.1 2.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain TusA PF01206.17 gi|568163177|ref|YP_008946500.1| - 2.8e-25 87.9 0.0 3.1e-25 87.8 0.0 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA DUF2249 PF10006.9 gi|568163177|ref|YP_008946500.1| - 0.017 15.0 0.0 0.031 14.1 0.0 1.6 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2249) DrsE_2 PF13686.6 gi|568163178|ref|YP_008946501.1| - 1.4e-27 96.4 0.6 2.5e-26 92.4 0.6 1.9 1 1 0 1 1 1 1 DsrE/DsrF/DrsH-like family DrsE PF02635.15 gi|568163178|ref|YP_008946501.1| - 6.5e-10 39.4 0.0 1.7e-09 38.1 0.0 1.6 1 1 0 1 1 1 1 DsrE/DsrF-like family SinI PF08671.10 gi|568163178|ref|YP_008946501.1| - 0.13 12.0 0.1 0.26 11.1 0.1 1.4 1 0 0 1 1 1 0 Anti-repressor SinI DrsE PF02635.15 gi|568163179|ref|YP_008946502.1| - 8.1e-21 74.6 0.0 9.3e-21 74.4 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family DrsE_2 PF13686.6 gi|568163179|ref|YP_008946502.1| - 2.4e-14 53.5 0.4 5.3e-06 26.4 0.1 2.0 1 1 1 2 2 2 2 DsrE/DsrF/DrsH-like family Pyr_redox_2 PF07992.14 gi|568163180|ref|YP_008946503.1| - 3.9e-44 151.1 1.1 5.2e-44 150.6 1.1 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|568163180|ref|YP_008946503.1| - 1.1e-19 70.7 2.9 4.2e-15 56.1 0.0 2.7 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|568163180|ref|YP_008946503.1| - 2.7e-17 63.0 0.0 5.3e-16 58.8 0.0 2.6 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox_3 PF13738.6 gi|568163180|ref|YP_008946503.1| - 4.8e-16 58.9 0.2 1.3e-15 57.4 0.2 1.7 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|568163180|ref|YP_008946503.1| - 3.7e-10 39.5 3.8 9.1e-05 21.7 0.2 3.6 3 1 0 4 4 4 2 Glucose inhibited division protein A DAO PF01266.24 gi|568163180|ref|YP_008946503.1| - 6.6e-10 39.1 6.1 0.014 15.0 0.0 3.2 2 1 1 3 3 3 3 FAD dependent oxidoreductase FAD_oxidored PF12831.7 gi|568163180|ref|YP_008946503.1| - 3.1e-09 36.7 0.4 6.8e-07 29.0 0.1 2.4 3 0 0 3 3 3 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|568163180|ref|YP_008946503.1| - 5.6e-09 35.2 3.2 0.0033 16.2 0.4 4.1 3 1 1 4 4 4 3 HI0933-like protein Thi4 PF01946.17 gi|568163180|ref|YP_008946503.1| - 1.1e-07 31.3 0.7 0.00045 19.5 0.0 2.9 3 0 0 3 3 3 2 Thi4 family Trp_halogenase PF04820.14 gi|568163180|ref|YP_008946503.1| - 1.2e-07 31.0 0.0 6e-05 22.1 0.1 2.2 2 0 0 2 2 2 2 Tryptophan halogenase FAD_binding_3 PF01494.19 gi|568163180|ref|YP_008946503.1| - 1.5e-07 31.0 0.1 0.00012 21.4 0.2 2.2 2 0 0 2 2 2 2 FAD binding domain NAD_binding_8 PF13450.6 gi|568163180|ref|YP_008946503.1| - 6.6e-07 29.5 1.2 0.0021 18.3 0.3 2.5 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 gi|568163180|ref|YP_008946503.1| - 5.1e-06 25.8 5.8 0.00014 21.1 1.6 2.5 3 0 0 3 3 3 2 FAD binding domain AlaDh_PNT_C PF01262.21 gi|568163180|ref|YP_008946503.1| - 8e-06 25.3 0.9 0.011 15.0 0.0 2.4 2 1 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain K_oxygenase PF13434.6 gi|568163180|ref|YP_008946503.1| - 8e-05 21.9 0.1 0.0073 15.5 0.0 2.7 2 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) Lycopene_cycl PF05834.12 gi|568163180|ref|YP_008946503.1| - 0.0013 17.9 0.3 0.22 10.6 0.0 2.3 2 0 0 2 2 2 1 Lycopene cyclase protein GDI PF00996.18 gi|568163180|ref|YP_008946503.1| - 0.0096 14.5 0.3 0.014 13.9 0.3 1.2 1 0 0 1 1 1 1 GDP dissociation inhibitor 3HCDH_N PF02737.18 gi|568163180|ref|YP_008946503.1| - 0.014 15.3 0.3 4 7.3 0.0 2.3 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 gi|568163180|ref|YP_008946503.1| - 0.046 14.2 0.8 5 7.6 0.0 2.5 2 0 0 2 2 2 0 Putative NAD(P)-binding NAD_Gly3P_dh_N PF01210.23 gi|568163180|ref|YP_008946503.1| - 0.085 12.8 0.0 5.5 6.9 0.0 2.5 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ApbA PF02558.16 gi|568163180|ref|YP_008946503.1| - 0.31 10.7 1.6 24 4.5 0.0 3.2 3 0 0 3 3 3 0 Ketopantoate reductase PanE/ApbA TrkA_N PF02254.18 gi|568163180|ref|YP_008946503.1| - 0.66 10.2 3.7 4.9 7.4 0.0 2.9 3 0 0 3 3 3 0 TrkA-N domain NAD_binding_9 PF13454.6 gi|568163180|ref|YP_008946503.1| - 2.1 8.3 3.6 53 3.8 0.2 3.8 3 2 1 4 4 4 0 FAD-NAD(P)-binding Thioredoxin_3 PF13192.6 gi|568163182|ref|YP_008946505.1| - 1.9e-11 43.8 0.1 3.3e-11 43.1 0.1 1.4 1 0 0 1 1 1 1 Thioredoxin domain DUF836 PF05768.14 gi|568163182|ref|YP_008946505.1| - 0.0016 18.8 0.0 0.0028 18.0 0.0 1.4 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) Thioredoxin PF00085.20 gi|568163182|ref|YP_008946505.1| - 0.0017 18.3 0.0 0.0054 16.7 0.0 1.8 2 0 0 2 2 2 1 Thioredoxin Thioredoxin_9 PF14595.6 gi|568163182|ref|YP_008946505.1| - 0.007 16.1 0.2 0.014 15.1 0.2 1.5 1 1 0 1 1 1 1 Thioredoxin Glutaredoxin PF00462.24 gi|568163182|ref|YP_008946505.1| - 0.0095 16.1 0.3 0.021 15.1 0.3 1.6 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin_2 PF13098.6 gi|568163182|ref|YP_008946505.1| - 0.13 12.7 0.1 0.25 11.8 0.1 1.7 1 1 0 1 1 1 0 Thioredoxin-like domain APOBEC1 PF18769.1 gi|568163182|ref|YP_008946505.1| - 0.14 12.4 0.0 0.24 11.7 0.0 1.3 1 0 0 1 1 1 0 APOBEC1 PIN_5 PF08745.11 gi|568163183|ref|YP_008946506.1| - 0.00037 20.0 0.1 0.0006 19.3 0.1 1.3 1 1 0 1 1 1 1 PINc domain ribonuclease Peptidase_M23 PF01551.22 gi|568163184|ref|YP_008946507.1| - 7.7e-07 29.2 0.0 1.4e-06 28.4 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M23 Radical_SAM PF04055.21 gi|568163185|ref|YP_008946508.1| - 6.1e-12 46.2 0.4 1.8e-11 44.7 0.1 1.8 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|568163185|ref|YP_008946508.1| - 0.0073 16.6 0.0 0.015 15.6 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain YukD PF08817.10 gi|568163185|ref|YP_008946508.1| - 0.12 13.1 0.0 0.37 11.5 0.0 1.8 2 0 0 2 2 2 0 WXG100 protein secretion system (Wss), protein YukD Radical_SAM PF04055.21 gi|568163186|ref|YP_008946509.1| - 1.4e-12 48.3 0.0 4.1e-12 46.8 0.0 1.8 1 1 1 2 2 2 1 Radical SAM superfamily zf-ZPR1 PF03367.13 gi|568163186|ref|YP_008946509.1| - 0.04 13.8 0.4 3.1 7.6 0.1 2.2 2 0 0 2 2 2 0 ZPR1 zinc-finger domain Fer4_12 PF13353.6 gi|568163186|ref|YP_008946509.1| - 0.046 14.0 0.0 0.076 13.3 0.0 1.3 1 0 0 1 1 1 0 4Fe-4S single cluster domain B12-binding PF02310.19 gi|568163186|ref|YP_008946509.1| - 0.14 12.2 0.1 0.62 10.1 0.1 2.0 1 1 0 1 1 1 0 B12 binding domain BPL_LplA_LipB PF03099.19 gi|568163187|ref|YP_008946510.1| - 6.6e-06 26.1 0.0 2.3e-05 24.3 0.0 1.9 2 0 0 2 2 2 1 Biotin/lipoate A/B protein ligase family Lip_prot_lig_C PF10437.9 gi|568163187|ref|YP_008946510.1| - 0.00027 20.9 1.4 0.00054 19.9 0.1 2.0 2 1 0 2 2 2 1 Bacterial lipoate protein ligase C-terminus DUF739 PF05339.11 gi|568163187|ref|YP_008946510.1| - 0.67 10.1 3.1 0.38 10.9 0.4 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF739) YHS PF04945.13 gi|568163188|ref|YP_008946511.1| - 2.4e-06 27.5 0.6 9.2e-06 25.7 0.6 1.8 1 1 0 1 1 1 1 YHS domain ADAM17_MPD PF16698.5 gi|568163188|ref|YP_008946511.1| - 0.0067 16.8 0.1 0.0087 16.4 0.1 1.2 1 0 0 1 1 1 1 Membrane-proximal domain, switch, for ADAM17 POR_N PF01855.19 gi|568163188|ref|YP_008946511.1| - 0.042 13.6 0.0 0.043 13.5 0.0 1.0 1 0 0 1 1 1 0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg FAP206 PF12018.8 gi|568163188|ref|YP_008946511.1| - 0.045 13.3 0.1 0.053 13.0 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function AGOG PF09171.10 gi|568163189|ref|YP_008946512.1| - 0.011 15.0 1.5 0.012 15.0 1.5 1.1 1 0 0 1 1 1 0 N-glycosylase/DNA lyase DUF3378 PF11858.8 gi|568163189|ref|YP_008946512.1| - 0.068 13.3 0.5 0.33 11.1 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3378) SapB_1 PF05184.15 gi|568163189|ref|YP_008946512.1| - 0.14 12.2 0.9 0.24 11.4 0.3 1.7 2 0 0 2 2 2 0 Saposin-like type B, region 1 HAD_2 PF13419.6 gi|568163190|ref|YP_008946513.1| - 0.00094 19.3 0.0 0.0015 18.7 0.0 1.3 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase FAD_binding_3 PF01494.19 gi|568163190|ref|YP_008946513.1| - 0.12 11.6 0.0 0.18 11.0 0.0 1.2 1 0 0 1 1 1 0 FAD binding domain GCV_H PF01597.19 gi|568163191|ref|YP_008946514.1| - 3.5e-28 97.9 0.4 4e-28 97.8 0.4 1.1 1 0 0 1 1 1 1 Glycine cleavage H-protein DPBB_1 PF03330.18 gi|568163191|ref|YP_008946514.1| - 0.079 13.2 0.0 0.31 11.4 0.0 2.1 1 1 1 2 2 2 0 Lytic transglycolase RuBisCO_small PF00101.20 gi|568163191|ref|YP_008946514.1| - 0.097 12.7 0.0 0.14 12.2 0.0 1.3 1 0 0 1 1 1 0 Ribulose bisphosphate carboxylase, small chain HlyD PF00529.20 gi|568163191|ref|YP_008946514.1| - 0.2 11.5 0.5 0.31 10.9 0.2 1.5 2 0 0 2 2 2 0 HlyD membrane-fusion protein of T1SS GCV_H PF01597.19 gi|568163192|ref|YP_008946515.1| - 1.4e-42 144.4 1.7 1.7e-42 144.1 1.7 1.1 1 0 0 1 1 1 1 Glycine cleavage H-protein Biotin_lipoyl PF00364.22 gi|568163192|ref|YP_008946515.1| - 2e-05 24.4 2.3 4.7e-05 23.1 1.1 2.1 2 0 0 2 2 2 1 Biotin-requiring enzyme RnfC_N PF13375.6 gi|568163192|ref|YP_008946515.1| - 0.0026 17.7 1.4 0.0036 17.2 0.2 1.8 2 0 0 2 2 2 1 RnfC Barrel sandwich hybrid domain HlyD_D23 PF16576.5 gi|568163192|ref|YP_008946515.1| - 0.007 15.6 0.5 0.031 13.5 0.0 2.2 2 1 1 3 3 3 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion Nup54_C PF18437.1 gi|568163192|ref|YP_008946515.1| - 0.17 11.8 3.4 0.33 10.9 3.4 1.4 1 0 0 1 1 1 0 Nup54 C-terminal interacting domain Lip_prot_lig_C PF10437.9 gi|568163193|ref|YP_008946516.1| - 8.5e-05 22.5 0.3 0.00028 20.8 0.3 1.9 1 0 0 1 1 1 1 Bacterial lipoate protein ligase C-terminus BPL_LplA_LipB PF03099.19 gi|568163193|ref|YP_008946516.1| - 0.016 15.1 0.0 0.029 14.3 0.0 1.3 1 0 0 1 1 1 0 Biotin/lipoate A/B protein ligase family DUF3490 PF11995.8 gi|568163194|ref|YP_008946517.1| - 0.03 14.2 0.1 0.038 13.8 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3490) PhetRS_B1 PF18262.1 gi|568163194|ref|YP_008946517.1| - 0.077 13.2 0.1 0.19 12.0 0.1 1.6 1 0 0 1 1 1 0 Phe-tRNA synthetase beta subunit B1 domain OsmC PF02566.19 gi|568163195|ref|YP_008946518.1| - 3.2e-20 72.5 0.0 4.8e-20 71.9 0.0 1.2 1 0 0 1 1 1 1 OsmC-like protein DUF2080 PF09853.9 gi|568163195|ref|YP_008946518.1| - 0.046 13.5 0.0 3.2 7.6 0.0 2.3 2 0 0 2 2 2 0 Putative transposon-encoded protein (DUF2080) E3_binding PF02817.17 gi|568163195|ref|YP_008946518.1| - 0.17 12.3 0.0 0.26 11.7 0.0 1.3 1 0 0 1 1 1 0 e3 binding domain SF3A3 PF16837.5 gi|568163196|ref|YP_008946519.1| - 0.11 13.1 0.0 0.26 11.9 0.0 1.6 1 0 0 1 1 1 0 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 HTH_24 PF13412.6 gi|568163197|ref|YP_008946520.1| - 2.8e-20 71.6 0.9 1.3e-11 43.8 0.1 2.3 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|568163197|ref|YP_008946520.1| - 8.6e-15 54.3 0.3 7.8e-08 32.0 0.0 2.7 3 0 0 3 3 3 2 AsnC-type helix-turn-helix domain HTH_Mga PF08280.11 gi|568163197|ref|YP_008946520.1| - 9.7e-06 25.5 0.0 0.041 13.9 0.0 2.9 3 0 0 3 3 3 2 M protein trans-acting positive regulator (MGA) HTH domain HTH_11 PF08279.12 gi|568163197|ref|YP_008946520.1| - 1.8e-05 24.6 0.2 0.00063 19.6 0.0 2.3 2 0 0 2 2 2 1 HTH domain HTH_20 PF12840.7 gi|568163197|ref|YP_008946520.1| - 0.00039 20.4 0.0 0.31 11.1 0.0 2.3 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_5 PF01022.20 gi|568163197|ref|YP_008946520.1| - 0.0005 19.9 0.1 0.07 13.0 0.1 2.4 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_Crp_2 PF13545.6 gi|568163197|ref|YP_008946520.1| - 0.00059 19.8 0.1 0.0069 16.3 0.0 2.2 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain MarR_2 PF12802.7 gi|568163197|ref|YP_008946520.1| - 0.00086 19.2 0.0 0.16 11.9 0.0 2.2 2 0 0 2 2 2 1 MarR family MarR PF01047.22 gi|568163197|ref|YP_008946520.1| - 0.0015 18.4 0.1 0.88 9.6 0.0 2.4 2 0 0 2 2 2 2 MarR family HTH_28 PF13518.6 gi|568163197|ref|YP_008946520.1| - 0.0069 16.5 0.0 1.1 9.4 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain Rrf2 PF02082.20 gi|568163197|ref|YP_008946520.1| - 0.0088 16.4 0.0 0.11 12.9 0.0 2.2 2 0 0 2 2 2 1 Transcriptional regulator HTH_23 PF13384.6 gi|568163197|ref|YP_008946520.1| - 0.029 14.2 0.0 10 6.1 0.0 2.3 2 0 0 2 2 2 0 Homeodomain-like domain HTH_10 PF04967.12 gi|568163197|ref|YP_008946520.1| - 0.11 12.3 0.1 2.7 7.9 0.0 2.2 2 0 0 2 2 2 0 HTH DNA binding domain Put_DNA-bind_N PF06971.13 gi|568163197|ref|YP_008946520.1| - 0.12 12.4 0.2 8.7 6.5 0.1 2.4 2 0 0 2 2 2 0 Putative DNA-binding protein N-terminus HTH_9 PF08221.11 gi|568163197|ref|YP_008946520.1| - 0.18 11.9 0.2 4.5 7.4 0.0 2.2 2 0 0 2 2 2 0 RNA polymerase III subunit RPC82 helix-turn-helix domain DUF1059 PF06348.11 gi|568163198|ref|YP_008946521.1| - 2.5e-23 82.0 0.3 2.9e-23 81.9 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1059) DUF1059 PF06348.11 gi|568163199|ref|YP_008946522.1| - 8e-47 157.3 0.1 7.9e-24 83.7 0.0 2.0 2 0 0 2 2 2 2 Protein of unknown function (DUF1059) Ogr_Delta PF04606.12 gi|568163199|ref|YP_008946522.1| - 0.0022 17.9 0.1 0.06 13.3 0.0 2.3 2 0 0 2 2 2 1 Ogr/Delta-like zinc finger zf-GRF PF06839.12 gi|568163199|ref|YP_008946522.1| - 0.15 12.2 3.2 0.21 11.7 0.2 2.1 2 0 0 2 2 2 0 GRF zinc finger DUF3953 PF13129.6 gi|568163200|ref|YP_008946523.1| - 0.00064 19.4 0.4 0.00064 19.4 0.4 2.5 3 0 0 3 3 3 1 Protein of unknown function (DUF3953) DUF929 PF06053.11 gi|568163201|ref|YP_008946524.1| - 9.1e-58 195.5 14.2 1.3e-57 195.0 14.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF929) Thioredoxin_2 PF13098.6 gi|568163201|ref|YP_008946524.1| - 0.061 13.8 0.0 0.28 11.6 0.0 2.1 2 0 0 2 2 2 0 Thioredoxin-like domain Thioredoxin_7 PF13899.6 gi|568163201|ref|YP_008946524.1| - 0.087 13.0 0.1 0.24 11.6 0.0 1.8 1 1 1 2 2 2 0 Thioredoxin-like DUF677 PF05055.12 gi|568163202|ref|YP_008946525.1| - 6.1 5.6 6.4 9.1 5.1 6.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF677) Amidase PF01425.21 gi|568163203|ref|YP_008946526.1| - 3.6e-99 332.8 0.0 5.3e-99 332.2 0.0 1.2 1 0 0 1 1 1 1 Amidase DUF4030 PF13222.6 gi|568163203|ref|YP_008946526.1| - 0.083 13.0 0.1 0.2 11.8 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF4030) 7kD_DNA_binding PF02294.18 gi|568163204|ref|YP_008946528.1| - 2.4e-40 136.3 3.1 2.7e-40 136.2 3.1 1.0 1 0 0 1 1 1 1 7kD DNA-binding domain Molybdopterin PF00384.22 gi|568163205|ref|YP_008946529.1| - 1.8e-07 30.5 0.0 4.4e-05 22.6 0.0 2.1 2 0 0 2 2 2 2 Molybdopterin oxidoreductase Molydop_binding PF01568.21 gi|568163205|ref|YP_008946529.1| - 0.0072 16.3 0.0 0.032 14.2 0.0 2.0 2 0 0 2 2 2 1 Molydopterin dinucleotide binding domain LuxC PF05893.14 gi|568163205|ref|YP_008946529.1| - 0.067 12.2 0.0 0.33 10.0 0.0 1.9 2 0 0 2 2 2 0 Acyl-CoA reductase (LuxC) Na_H_Exchanger PF00999.21 gi|568163206|ref|YP_008946530.1| - 2e-45 155.2 56.4 2.3e-45 155.0 56.4 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family CoA_trans PF01144.23 gi|568163208|ref|YP_008946532.1| - 7.3e-23 81.1 0.0 9.3e-23 80.8 0.0 1.1 1 0 0 1 1 1 1 Coenzyme A transferase CspB_prodomain PF18425.1 gi|568163208|ref|YP_008946532.1| - 0.025 14.6 0.2 0.066 13.2 0.1 1.7 1 1 0 1 1 1 0 Csp protease B prodomain 40S_S4_C PF16121.5 gi|568163208|ref|YP_008946532.1| - 0.15 11.8 0.1 0.63 9.7 0.0 2.0 2 0 0 2 2 2 0 40S ribosomal protein S4 C-terminus CoA_trans PF01144.23 gi|568163209|ref|YP_008946533.1| - 9e-28 97.2 0.0 1e-27 97.0 0.0 1.0 1 0 0 1 1 1 1 Coenzyme A transferase Hydantoinase_B PF02538.14 gi|568163210|ref|YP_008946534.1| - 4.5e-171 569.8 0.0 5e-171 569.6 0.0 1.0 1 0 0 1 1 1 1 Hydantoinase B/oxoprolinase Hydantoinase_A PF01968.18 gi|568163211|ref|YP_008946535.1| - 1.7e-97 326.2 0.3 2.1e-95 319.3 0.1 2.2 2 0 0 2 2 2 2 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 gi|568163211|ref|YP_008946535.1| - 4.6e-50 169.8 0.0 7.8e-50 169.0 0.0 1.4 1 0 0 1 1 1 1 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.6 gi|568163211|ref|YP_008946535.1| - 0.00062 18.5 0.3 0.45 9.0 0.0 2.2 2 0 0 2 2 2 2 MutL protein ROK PF00480.20 gi|568163211|ref|YP_008946535.1| - 0.0024 17.4 0.6 0.0056 16.2 0.1 1.9 3 0 0 3 3 3 1 ROK family BcrAD_BadFG PF01869.20 gi|568163211|ref|YP_008946535.1| - 0.082 12.4 0.0 0.29 10.6 0.0 1.9 2 0 0 2 2 2 0 BadF/BadG/BcrA/BcrD ATPase family MTS PF05175.14 gi|568164762|ref|YP_008946537.1| - 0.00018 21.1 0.0 0.00019 21.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.6 gi|568164762|ref|YP_008946537.1| - 0.0012 18.6 0.0 0.0016 18.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 gi|568164762|ref|YP_008946537.1| - 0.0065 16.5 0.0 0.0065 16.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|568164762|ref|YP_008946537.1| - 0.013 15.3 0.0 0.014 15.2 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain AdoMet_MTase PF07757.13 gi|568164762|ref|YP_008946537.1| - 0.019 15.3 0.0 0.019 15.3 0.0 1.1 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase PCMT PF01135.19 gi|568164762|ref|YP_008946537.1| - 0.051 13.3 0.0 0.052 13.3 0.0 1.1 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_25 PF13649.6 gi|568164762|ref|YP_008946537.1| - 0.063 14.0 0.0 0.22 12.3 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase domain PrmA PF06325.13 gi|568164762|ref|YP_008946537.1| - 0.22 10.9 0.0 0.22 10.9 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) UPF0020 PF01170.18 gi|568164763|ref|YP_008946538.1| - 0.00059 19.6 0.0 0.00063 19.5 0.0 1.0 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_31 PF13847.6 gi|568164763|ref|YP_008946538.1| - 0.0018 18.0 0.0 0.002 17.9 0.0 1.0 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|568164763|ref|YP_008946538.1| - 0.0034 18.0 0.0 0.0034 18.0 0.0 1.0 1 0 0 1 1 1 1 Methyltransferase domain CheR PF01739.18 gi|568164763|ref|YP_008946538.1| - 0.034 13.6 0.1 0.034 13.6 0.1 1.0 1 0 0 1 1 1 0 CheR methyltransferase, SAM binding domain Methyltransf_12 PF08242.12 gi|568164763|ref|YP_008946538.1| - 0.057 14.2 0.0 0.057 14.2 0.0 1.0 1 0 0 1 1 1 0 Methyltransferase domain Imm42 PF15593.6 gi|568164764|ref|YP_008946539.1| - 0.052 14.0 0.1 0.052 14.0 0.1 1.1 1 0 0 1 1 1 0 Immunity protein 42 ESPR PF13018.6 gi|568164764|ref|YP_008946539.1| - 0.12 12.2 0.1 0.23 11.3 0.1 1.5 1 0 0 1 1 1 0 Extended Signal Peptide of Type V secretion system MFS_1 PF07690.16 gi|568163212|ref|YP_008946540.1| - 2e-25 89.5 62.8 7.2e-21 74.5 30.1 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily SafA PF17073.5 gi|568163212|ref|YP_008946540.1| - 1.5 8.8 4.4 27 4.8 2.2 3.1 2 0 0 2 2 2 0 Two-component-system connector protein Peptidase_M1 PF01433.20 gi|568163213|ref|YP_008946541.1| - 2.3e-83 279.1 1.7 3.5e-83 278.5 1.7 1.3 1 0 0 1 1 1 1 Peptidase family M1 domain Peptidase_M1_N PF17900.1 gi|568163213|ref|YP_008946541.1| - 1.1e-34 120.2 0.1 2.3e-34 119.2 0.1 1.5 1 0 0 1 1 1 1 Peptidase M1 N-terminal domain ERAP1_C PF11838.8 gi|568163213|ref|YP_008946541.1| - 4e-30 105.4 0.5 6.1e-30 104.8 0.5 1.3 1 0 0 1 1 1 1 ERAP1-like C-terminal domain Aminopep PF10023.9 gi|568163213|ref|YP_008946541.1| - 0.037 13.4 0.1 0.07 12.5 0.1 1.3 1 0 0 1 1 1 0 Putative aminopeptidase tRNA-synt_1 PF00133.22 gi|568163214|ref|YP_008946542.1| - 2.7e-55 187.7 0.0 4.7e-54 183.7 0.0 2.3 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 gi|568163214|ref|YP_008946542.1| - 1.1e-27 96.8 0.2 4.2e-14 52.1 0.0 3.4 2 1 1 3 3 3 3 tRNA synthetases class I (M) Anticodon_1 PF08264.13 gi|568163214|ref|YP_008946542.1| - 7.8e-20 71.4 0.7 2e-19 70.0 0.7 1.7 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.19 gi|568163214|ref|YP_008946542.1| - 9.7e-14 51.4 0.3 1.5e-05 24.5 0.1 3.1 3 2 0 3 3 3 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.6 gi|568163214|ref|YP_008946542.1| - 1.6e-12 47.3 0.0 4.1e-12 46.0 0.0 1.6 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 sCache_like PF16736.5 gi|568163214|ref|YP_008946542.1| - 0.017 15.2 0.6 0.038 14.1 0.6 1.5 1 0 0 1 1 1 0 Single Cache-like tRNA-synt_1f PF01921.18 gi|568163214|ref|YP_008946542.1| - 0.029 13.3 0.0 0.68 8.8 0.0 2.3 2 0 0 2 2 2 0 tRNA synthetases class I (K) CENP-X PF09415.10 gi|568163214|ref|YP_008946542.1| - 0.045 14.1 0.1 0.13 12.6 0.0 1.8 2 0 0 2 2 2 0 CENP-S associating Centromere protein X Radical_SAM PF04055.21 gi|568163215|ref|YP_008946543.1| - 4.2e-09 37.0 0.1 1.3e-08 35.5 0.0 1.8 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|568163215|ref|YP_008946543.1| - 2.2e-07 31.2 0.1 6.4e-07 29.7 0.0 1.8 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|568163215|ref|YP_008946543.1| - 0.00027 21.0 0.0 0.00079 19.6 0.0 1.8 1 0 0 1 1 1 1 4Fe-4S single cluster domain Peptidase_M20 PF01546.28 gi|568163216|ref|YP_008946544.1| - 1.9e-35 122.5 0.0 2.5e-35 122.1 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|568163216|ref|YP_008946544.1| - 1.4e-16 60.4 0.0 2.8e-16 59.4 0.0 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain DUF3349 PF11829.8 gi|568163216|ref|YP_008946544.1| - 0.018 15.8 0.0 0.045 14.5 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3349) PP_kinase_C_1 PF17941.1 gi|568163216|ref|YP_008946544.1| - 0.17 11.4 0.0 0.3 10.6 0.0 1.3 1 0 0 1 1 1 0 Polyphosphate kinase C-terminal domain 1 PriX PF18689.1 gi|568163218|ref|YP_008946546.1| - 8e-41 138.4 2.1 1.3e-40 137.7 2.1 1.3 1 0 0 1 1 1 1 Primase X ATP_bind_3 PF01171.20 gi|568163219|ref|YP_008946547.1| - 3.2e-14 53.1 0.0 9.9e-14 51.5 0.0 1.7 1 1 0 1 1 1 1 PP-loop family PAPS_reduct PF01507.19 gi|568163219|ref|YP_008946547.1| - 0.00045 20.3 0.0 0.00091 19.3 0.0 1.5 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family ThiI PF02568.14 gi|568163219|ref|YP_008946547.1| - 0.00072 19.2 0.0 0.0011 18.6 0.0 1.5 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) tRNA_Me_trans PF03054.16 gi|568163219|ref|YP_008946547.1| - 0.00084 18.2 0.0 0.0018 17.1 0.0 1.5 1 1 0 1 1 1 1 tRNA methyl transferase RecR PF02132.15 gi|568163219|ref|YP_008946547.1| - 0.0018 17.8 3.8 0.0074 15.8 1.4 2.7 2 0 0 2 2 2 1 RecR protein Usp PF00582.26 gi|568163219|ref|YP_008946547.1| - 0.003 18.1 0.0 0.8 10.2 0.0 2.9 2 1 1 3 3 3 1 Universal stress protein family NAD_synthase PF02540.17 gi|568163219|ref|YP_008946547.1| - 0.017 14.2 0.0 0.027 13.6 0.0 1.3 1 0 0 1 1 1 0 NAD synthase zinc_ribbon_15 PF17032.5 gi|568163219|ref|YP_008946547.1| - 0.051 14.3 3.0 0.095 13.5 0.1 2.6 3 0 0 3 3 3 0 zinc-ribbon family QueC PF06508.13 gi|568163219|ref|YP_008946547.1| - 0.054 13.0 0.0 0.31 10.5 0.0 2.1 2 0 0 2 2 2 0 Queuosine biosynthesis protein QueC DUF2862 PF11061.8 gi|568163219|ref|YP_008946547.1| - 0.1 12.4 0.0 0.32 10.9 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2862) DZR PF12773.7 gi|568163219|ref|YP_008946547.1| - 4.8 7.3 7.9 0.49 10.5 1.2 2.4 3 0 0 3 3 3 0 Double zinc ribbon Serpin PF00079.20 gi|568163220|ref|YP_008946548.1| - 0.041 13.2 0.0 0.054 12.8 0.0 1.2 1 0 0 1 1 1 0 Serpin (serine protease inhibitor) Enkurin PF13864.6 gi|568163220|ref|YP_008946548.1| - 0.29 11.6 4.1 5.3 7.6 0.0 2.9 3 0 0 3 3 3 0 Calmodulin-binding SfsA PF03749.13 gi|568163221|ref|YP_008946549.1| - 4.3e-39 133.6 0.0 7e-39 132.9 0.0 1.3 1 0 0 1 1 1 1 Sugar fermentation stimulation protein RE domain SfsA_N PF17746.1 gi|568163221|ref|YP_008946549.1| - 4.5e-15 55.5 0.2 9e-15 54.6 0.2 1.5 1 0 0 1 1 1 1 SfsA N-terminal OB domain SIR2 PF02146.17 gi|568163222|ref|YP_008946550.1| - 1.4e-52 178.1 0.0 1.8e-52 177.8 0.0 1.1 1 0 0 1 1 1 1 Sir2 family TPP_enzyme_M PF00205.22 gi|568163222|ref|YP_008946550.1| - 0.034 13.9 0.0 0.26 11.0 0.0 2.1 2 0 0 2 2 2 0 Thiamine pyrophosphate enzyme, central domain SSF PF00474.17 gi|568163223|ref|YP_008946551.1| - 2.5e-13 49.7 33.5 4.3e-13 48.9 33.5 1.4 1 0 0 1 1 1 1 Sodium:solute symporter family Vma12 PF11712.8 gi|568163223|ref|YP_008946551.1| - 0.11 12.5 1.7 6.1 6.9 0.0 3.4 4 0 0 4 4 4 0 Endoplasmic reticulum-based factor for assembly of V-ATPase DUF2203 PF09969.9 gi|568163224|ref|YP_008946552.1| - 5.3e-31 107.9 0.2 2.8e-30 105.6 0.2 1.8 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2203) DOCK_N PF16172.5 gi|568163224|ref|YP_008946552.1| - 0.098 11.6 0.1 0.11 11.4 0.1 1.0 1 0 0 1 1 1 0 DOCK N-terminus NAD_binding_2 PF03446.15 gi|568163225|ref|YP_008946553.1| - 2.4e-35 122.1 0.2 3.7e-35 121.4 0.2 1.3 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 gi|568163225|ref|YP_008946553.1| - 1.2e-26 93.3 0.0 2.1e-26 92.6 0.0 1.4 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F420_oxidored PF03807.17 gi|568163225|ref|YP_008946553.1| - 1.8e-06 28.4 0.0 7.2e-06 26.5 0.0 2.0 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent Shikimate_DH PF01488.20 gi|568163225|ref|YP_008946553.1| - 0.00011 22.3 0.0 0.00023 21.2 0.0 1.6 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase 2-Hacid_dh_C PF02826.19 gi|568163225|ref|YP_008946553.1| - 0.00081 18.8 0.0 0.0017 17.7 0.0 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UDPG_MGDP_dh_C PF03720.15 gi|568163225|ref|YP_008946553.1| - 0.01 16.2 0.1 0.039 14.4 0.0 1.9 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GFO_IDH_MocA PF01408.22 gi|568163225|ref|YP_008946553.1| - 0.025 15.4 0.0 0.057 14.2 0.0 1.6 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold NfI_DNAbd_pre-N PF10524.9 gi|568163225|ref|YP_008946553.1| - 0.064 13.1 0.0 0.42 10.5 0.0 2.1 2 0 0 2 2 2 0 Nuclear factor I protein pre-N-terminus SchA_CurD PF04486.12 gi|568163225|ref|YP_008946553.1| - 0.13 12.3 0.0 0.39 10.8 0.0 1.7 1 1 0 1 1 1 0 SchA/CurD like domain Rdx PF10262.9 gi|568163227|ref|YP_008946555.1| - 2e-18 66.3 0.0 2.3e-18 66.2 0.0 1.0 1 0 0 1 1 1 1 Rdx family ABC2_membrane PF01061.24 gi|568163228|ref|YP_008946556.1| - 2e-14 53.5 14.4 2e-14 53.5 14.4 2.4 3 0 0 3 3 3 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|568163228|ref|YP_008946556.1| - 1e-08 34.7 30.6 1.7e-07 30.7 30.6 2.1 1 1 0 1 1 1 1 ABC-2 family transporter protein FNIP_M PF14637.6 gi|568163228|ref|YP_008946556.1| - 0.13 12.2 0.0 0.24 11.4 0.0 1.4 1 0 0 1 1 1 0 Folliculin-interacting protein middle domain ABC_tran PF00005.27 gi|568163229|ref|YP_008946557.1| - 2.3e-32 112.4 0.0 3.5e-32 111.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|568163229|ref|YP_008946557.1| - 3.4e-12 46.8 0.1 4.8e-07 29.9 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|568163229|ref|YP_008946557.1| - 0.00012 21.9 0.0 0.041 13.6 0.0 2.2 1 1 1 2 2 2 2 AAA ATPase domain SMC_N PF02463.19 gi|568163229|ref|YP_008946557.1| - 0.00026 20.5 0.2 0.37 10.2 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain Thymidylate_kin PF02223.17 gi|568163229|ref|YP_008946557.1| - 0.0011 18.6 0.0 0.043 13.5 0.0 2.1 2 0 0 2 2 2 1 Thymidylate kinase AAA_29 PF13555.6 gi|568163229|ref|YP_008946557.1| - 0.0033 17.1 0.1 0.0079 15.9 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain Rad17 PF03215.15 gi|568163229|ref|YP_008946557.1| - 0.0036 17.2 0.3 0.016 15.2 0.1 2.1 1 1 0 2 2 2 1 Rad17 P-loop domain SRP54 PF00448.22 gi|568163229|ref|YP_008946557.1| - 0.0038 16.9 0.3 0.0065 16.1 0.3 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SbcCD_C PF13558.6 gi|568163229|ref|YP_008946557.1| - 0.0057 16.9 0.0 0.077 13.2 0.0 2.5 2 1 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_30 PF13604.6 gi|568163229|ref|YP_008946557.1| - 0.011 15.5 0.0 0.022 14.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|568163229|ref|YP_008946557.1| - 0.013 16.0 6.3 0.087 13.3 6.3 2.2 1 1 0 1 1 1 0 AAA domain AAA_19 PF13245.6 gi|568163229|ref|YP_008946557.1| - 0.035 14.5 0.0 0.048 14.0 0.0 1.4 1 1 0 1 1 1 0 AAA domain AAA_10 PF12846.7 gi|568163229|ref|YP_008946557.1| - 0.035 13.0 1.4 0.37 9.7 0.1 2.5 2 1 1 3 3 3 0 AAA-like domain Ldh_1_C PF02866.18 gi|568163229|ref|YP_008946557.1| - 0.036 14.0 0.0 0.069 13.1 0.0 1.5 1 0 0 1 1 1 0 lactate/malate dehydrogenase, alpha/beta C-terminal domain AAA_22 PF13401.6 gi|568163229|ref|YP_008946557.1| - 0.041 14.2 0.3 0.22 11.8 0.2 2.3 1 1 1 2 2 2 0 AAA domain AAA_24 PF13479.6 gi|568163229|ref|YP_008946557.1| - 0.086 12.5 0.6 0.17 11.6 0.1 1.9 2 1 0 2 2 2 0 AAA domain AAA PF00004.29 gi|568163229|ref|YP_008946557.1| - 0.094 13.1 1.9 0.87 10.0 1.9 2.6 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_27 PF13514.6 gi|568163229|ref|YP_008946557.1| - 0.11 12.0 0.0 0.23 11.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 gi|568163229|ref|YP_008946557.1| - 0.12 11.9 0.0 0.26 10.8 0.0 1.5 1 1 0 1 1 1 0 AAA domain DUF3398 PF11878.8 gi|568163229|ref|YP_008946557.1| - 0.14 12.6 0.0 0.22 11.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3398) T2SSE PF00437.20 gi|568163229|ref|YP_008946557.1| - 0.14 11.1 0.0 0.21 10.6 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein DUF87 PF01935.17 gi|568163229|ref|YP_008946557.1| - 0.47 10.5 3.7 0.31 11.1 0.6 2.1 3 0 0 3 3 3 0 Helicase HerA, central domain AIRS PF00586.24 gi|568163230|ref|YP_008946558.1| - 3.4e-10 40.5 0.1 6.5e-10 39.5 0.1 1.4 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.22 gi|568163230|ref|YP_008946558.1| - 1.2e-09 38.5 0.0 1.8e-09 37.9 0.0 1.3 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain NTP_transf_3 PF12804.7 gi|568163231|ref|YP_008946559.1| - 1.5e-09 38.4 0.0 3.5e-09 37.2 0.0 1.5 1 1 0 1 1 1 1 MobA-like NTP transferase domain NTP_transferase PF00483.23 gi|568163231|ref|YP_008946559.1| - 0.036 13.6 0.0 0.048 13.2 0.0 1.2 1 0 0 1 1 1 0 Nucleotidyl transferase CTP_transf_3 PF02348.19 gi|568163231|ref|YP_008946559.1| - 0.053 13.4 0.0 0.13 12.1 0.0 1.6 2 0 0 2 2 2 0 Cytidylyltransferase DUF1614 PF07758.11 gi|568163232|ref|YP_008946560.1| - 1e-47 162.3 13.6 1.6e-47 161.6 13.6 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1614) Pkr1 PF08636.10 gi|568163232|ref|YP_008946560.1| - 4.3 7.6 19.7 0.96 9.6 2.8 3.4 2 1 0 2 2 2 0 ER protein Pkr1 DUF4959 PF16323.5 gi|568164765|ref|YP_008946561.1| - 0.23 11.8 0.0 0.32 11.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4959) TP_methylase PF00590.20 gi|568163233|ref|YP_008946562.1| - 3.6e-45 154.5 0.8 4.5e-45 154.2 0.8 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases TP_methylase PF00590.20 gi|568163234|ref|YP_008946563.1| - 1.2e-35 123.3 0.0 1.4e-35 123.2 0.0 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Methyltransf_31 PF13847.6 gi|568163235|ref|YP_008946564.1| - 2.9e-10 40.2 0.0 3.9e-10 39.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|568163235|ref|YP_008946564.1| - 2.4e-09 37.2 0.4 6.7e-09 35.8 0.1 1.7 1 1 1 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_3 PF01596.17 gi|568163235|ref|YP_008946564.1| - 7.9e-08 31.7 0.1 1.1e-07 31.3 0.1 1.2 1 0 0 1 1 1 1 O-methyltransferase Cons_hypoth95 PF03602.15 gi|568163235|ref|YP_008946564.1| - 3.2e-07 30.2 0.0 4.1e-07 29.8 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 PrmA PF06325.13 gi|568163235|ref|YP_008946564.1| - 4.2e-07 29.6 0.4 5.7e-07 29.2 0.4 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Ubie_methyltran PF01209.18 gi|568163235|ref|YP_008946564.1| - 4.8e-06 26.1 0.0 5.4e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_25 PF13649.6 gi|568163235|ref|YP_008946564.1| - 5.8e-06 26.9 0.0 8.5e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|568163235|ref|YP_008946564.1| - 1e-05 25.1 0.0 2.6e-05 23.9 0.0 1.6 2 0 0 2 2 2 1 Methyltransferase small domain GidB PF02527.15 gi|568163235|ref|YP_008946564.1| - 1.1e-05 24.9 0.2 1.4e-05 24.5 0.2 1.2 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G Methyltransf_24 PF13578.6 gi|568163235|ref|YP_008946564.1| - 1.5e-05 26.0 0.0 2.1e-05 25.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain GCD14 PF08704.10 gi|568163235|ref|YP_008946564.1| - 3.5e-05 23.6 0.0 4.5e-05 23.3 0.0 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Met_10 PF02475.16 gi|568163235|ref|YP_008946564.1| - 0.00011 22.0 0.0 0.00014 21.7 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_4 PF02390.17 gi|568163235|ref|YP_008946564.1| - 0.0002 20.8 0.1 0.00065 19.2 0.0 1.8 2 0 0 2 2 2 1 Putative methyltransferase Methyltransf_11 PF08241.12 gi|568163235|ref|YP_008946564.1| - 0.0016 19.0 0.0 0.0028 18.3 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|568163235|ref|YP_008946564.1| - 0.0021 17.4 0.0 0.0034 16.7 0.0 1.3 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_18 PF12847.7 gi|568163235|ref|YP_008946564.1| - 0.0027 17.6 0.1 0.0053 16.7 0.1 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|568163235|ref|YP_008946564.1| - 0.0067 16.3 0.0 0.0072 16.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltr_RsmB-F PF01189.17 gi|568163235|ref|YP_008946564.1| - 0.0097 15.6 0.0 0.048 13.3 0.0 1.9 1 1 1 2 2 2 1 16S rRNA methyltransferase RsmB/F Methyltransf_15 PF09445.10 gi|568163235|ref|YP_008946564.1| - 0.012 15.2 0.0 0.02 14.5 0.0 1.2 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase RrnaAD PF00398.20 gi|568163235|ref|YP_008946564.1| - 0.016 14.3 0.1 0.026 13.6 0.1 1.3 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase Fibrillarin PF01269.17 gi|568163235|ref|YP_008946564.1| - 0.016 14.3 0.1 0.023 13.8 0.1 1.4 1 1 0 1 1 1 0 Fibrillarin DOT1 PF08123.13 gi|568163235|ref|YP_008946564.1| - 0.036 13.6 0.0 0.057 12.9 0.0 1.3 1 0 0 1 1 1 0 Histone methylation protein DOT1 Methyltransf_12 PF08242.12 gi|568163235|ref|YP_008946564.1| - 0.044 14.5 0.0 0.071 13.9 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_16 PF10294.9 gi|568163235|ref|YP_008946564.1| - 0.045 13.5 0.1 0.09 12.5 0.0 1.5 2 0 0 2 2 2 0 Lysine methyltransferase Methyltransf_5 PF01795.19 gi|568163235|ref|YP_008946564.1| - 0.061 12.8 0.0 0.082 12.4 0.0 1.3 1 1 0 1 1 1 0 MraW methylase family TRM PF02005.16 gi|568163235|ref|YP_008946564.1| - 0.11 11.7 0.0 0.19 10.9 0.0 1.4 2 0 0 2 2 2 0 N2,N2-dimethylguanosine tRNA methyltransferase CbiD PF01888.17 gi|568163236|ref|YP_008946565.1| - 1.4e-72 244.1 2.4 2.2e-72 243.4 2.4 1.3 1 0 0 1 1 1 1 CbiD TP_methylase PF00590.20 gi|568163237|ref|YP_008946566.1| - 2.7e-38 132.1 0.1 3.4e-38 131.7 0.1 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases RPT PF13446.6 gi|568163237|ref|YP_008946566.1| - 0.11 12.5 0.3 1.2 9.1 0.0 2.4 2 0 0 2 2 2 0 A repeated domain in UCH-protein CbiC PF02570.15 gi|568163238|ref|YP_008946567.1| - 3.1e-54 183.6 0.4 4.1e-54 183.2 0.4 1.1 1 0 0 1 1 1 1 Precorrin-8X methylmutase CbiX PF01903.17 gi|568163238|ref|YP_008946567.1| - 7.2e-17 61.7 0.0 2.7e-16 59.8 0.0 2.0 1 1 1 2 2 2 1 CbiX HTH_10 PF04967.12 gi|568163238|ref|YP_008946567.1| - 0.19 11.6 0.4 1.7 8.5 0.1 2.5 3 0 0 3 3 3 0 HTH DNA binding domain PNISR PF15996.5 gi|568163238|ref|YP_008946567.1| - 0.21 11.9 0.0 0.3 11.4 0.0 1.2 1 0 0 1 1 1 0 Arginine/serine-rich protein PNISR TP_methylase PF00590.20 gi|568163239|ref|YP_008946568.1| - 9.5e-29 100.9 0.0 1.1e-28 100.6 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases CbiG_N PF11760.8 gi|568163240|ref|YP_008946569.1| - 1.5e-29 101.8 0.0 3.6e-29 100.6 0.0 1.7 1 0 0 1 1 1 1 Cobalamin synthesis G N-terminal CbiG_C PF01890.16 gi|568163240|ref|YP_008946569.1| - 2.5e-14 53.8 0.5 5.4e-14 52.7 0.0 1.8 2 0 0 2 2 2 1 Cobalamin synthesis G C-terminus Asparaginase_2 PF01112.18 gi|568163241|ref|YP_008946570.1| - 6.7e-68 229.0 8.3 6.4e-39 133.8 2.5 2.0 1 1 1 2 2 2 2 Asparaginase CBM_4_9 PF02018.17 gi|568164767|ref|YP_008946572.1| - 0.044 14.1 1.7 0.068 13.4 1.6 1.4 1 1 0 1 1 1 0 Carbohydrate binding domain AKAP28 PF14469.6 gi|568164768|ref|YP_008946573.1| - 0.097 12.4 0.0 0.19 11.5 0.0 1.5 1 0 0 1 1 1 0 28 kDa A-kinase anchor DUF1107 PF06526.12 gi|568164769|ref|YP_008946574.1| - 0.097 12.6 0.0 0.86 9.5 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1107) DUF531 PF04407.12 gi|568164770|ref|YP_008946575.1| - 0.12 12.5 0.0 0.16 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF531) ADH_N PF08240.12 gi|568163242|ref|YP_008946576.1| - 1.1e-25 89.6 1.5 2e-25 88.8 0.3 1.9 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|568163242|ref|YP_008946576.1| - 1e-22 80.5 0.0 1.7e-22 79.8 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 gi|568163242|ref|YP_008946576.1| - 6.6e-14 51.9 0.6 9.9e-14 51.3 0.6 1.2 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 gi|568163242|ref|YP_008946576.1| - 0.00074 20.6 0.0 0.0013 19.8 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase DUF4147 PF13660.6 gi|568163242|ref|YP_008946576.1| - 0.01 15.4 0.4 0.27 10.7 0.0 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4147) Shikimate_DH PF01488.20 gi|568163242|ref|YP_008946576.1| - 0.025 14.7 0.0 0.049 13.7 0.0 1.4 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Fer4_17 PF13534.6 gi|568163242|ref|YP_008946576.1| - 0.031 14.8 1.8 0.038 14.5 0.5 1.8 2 0 0 2 2 2 0 4Fe-4S dicluster domain FAD_binding_3 PF01494.19 gi|568163242|ref|YP_008946576.1| - 0.11 11.7 0.0 0.2 10.9 0.0 1.3 1 0 0 1 1 1 0 FAD binding domain Fer4_8 PF13183.6 gi|568163242|ref|YP_008946576.1| - 0.22 12.0 0.4 0.22 12.0 0.4 1.8 2 0 0 2 2 2 0 4Fe-4S dicluster domain CobS PF02654.15 gi|568163243|ref|YP_008946577.1| - 1.9e-29 103.3 11.4 2.2e-29 103.1 11.4 1.0 1 0 0 1 1 1 1 Cobalamin-5-phosphate synthase GATase_3 PF07685.14 gi|568163244|ref|YP_008946578.1| - 4.5e-32 111.2 0.0 6.5e-32 110.7 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain CbiA PF01656.23 gi|568163244|ref|YP_008946578.1| - 2.4e-12 47.0 0.0 4.6e-12 46.1 0.0 1.4 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_26 PF13500.6 gi|568163244|ref|YP_008946578.1| - 7.1e-11 42.3 0.0 1.3e-07 31.7 0.0 2.2 2 0 0 2 2 2 2 AAA domain SNO PF01174.19 gi|568163244|ref|YP_008946578.1| - 0.0087 15.9 0.0 0.015 15.1 0.0 1.3 1 0 0 1 1 1 1 SNO glutamine amidotransferase family GATase PF00117.28 gi|568163244|ref|YP_008946578.1| - 0.011 15.5 0.0 0.017 14.9 0.0 1.3 1 0 0 1 1 1 0 Glutamine amidotransferase class-I NqrM PF04400.13 gi|568163244|ref|YP_008946578.1| - 0.27 11.0 0.5 0.56 10.0 0.5 1.4 1 0 0 1 1 1 0 (Na+)-NQR maturation NqrM GMP_synt_C PF00958.22 gi|568163245|ref|YP_008946579.1| - 1.9e-21 75.9 2.5 4.9e-18 65.0 0.4 3.0 1 1 2 3 3 3 2 GMP synthase C terminal domain NAD_synthase PF02540.17 gi|568163245|ref|YP_008946579.1| - 9.1e-13 47.9 0.1 4.3e-12 45.7 0.1 2.0 1 1 0 1 1 1 1 NAD synthase ATP_bind_3 PF01171.20 gi|568163245|ref|YP_008946579.1| - 9.5e-08 32.0 0.0 1.5e-07 31.4 0.0 1.3 1 0 0 1 1 1 1 PP-loop family QueC PF06508.13 gi|568163245|ref|YP_008946579.1| - 1.1e-06 28.4 0.0 6.7e-05 22.5 0.0 2.3 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC DUF1152 PF06626.12 gi|568163245|ref|YP_008946579.1| - 0.0032 16.7 0.1 0.0092 15.2 0.0 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF1152) Arginosuc_synth PF00764.19 gi|568163245|ref|YP_008946579.1| - 0.013 14.9 0.0 0.019 14.3 0.0 1.3 1 0 0 1 1 1 0 Arginosuccinate synthase ThiI PF02568.14 gi|568163245|ref|YP_008946579.1| - 0.037 13.6 0.0 0.11 12.0 0.0 1.9 1 1 0 1 1 1 0 Thiamine biosynthesis protein (ThiI) tRNA_Me_trans PF03054.16 gi|568163245|ref|YP_008946579.1| - 0.041 12.7 0.0 0.89 8.3 0.0 2.2 2 0 0 2 2 2 0 tRNA methyl transferase Calpain_III PF01067.22 gi|568163245|ref|YP_008946579.1| - 0.15 12.3 0.0 0.29 11.4 0.0 1.4 1 0 0 1 1 1 0 Calpain large subunit, domain III Latarcin PF10279.9 gi|568163245|ref|YP_008946579.1| - 0.34 11.4 2.7 3.7 8.0 0.2 3.1 3 0 0 3 3 3 0 Latarcin precursor Tautomerase PF01361.21 gi|568163245|ref|YP_008946579.1| - 0.46 10.4 2.4 18 5.4 0.0 3.3 3 0 0 3 3 3 0 Tautomerase enzyme Peptidase_M48 PF01435.18 gi|568163246|ref|YP_008946580.1| - 4.4e-25 88.6 0.0 1.2e-24 87.2 0.0 1.7 1 1 1 2 2 2 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|568163246|ref|YP_008946580.1| - 0.035 13.3 0.2 0.035 13.3 0.2 1.9 2 1 0 2 2 2 0 BlaR1 peptidase M56 DUF1689 PF07954.11 gi|568163247|ref|YP_008946581.1| - 0.18 12.2 0.2 0.6 10.5 0.2 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF1689) DeoC PF01791.9 gi|568163248|ref|YP_008946582.1| - 1.8e-34 119.4 0.0 2.1e-34 119.2 0.0 1.0 1 0 0 1 1 1 1 DeoC/LacD family aldolase Peripla_BP_4 PF13407.6 gi|568163248|ref|YP_008946582.1| - 0.033 13.7 0.3 0.12 11.9 0.3 1.8 1 1 0 1 1 1 0 Periplasmic binding protein domain PMT_2 PF13231.6 gi|568163249|ref|YP_008946583.1| - 3.2e-08 33.9 14.8 3.2e-08 33.9 14.8 2.9 3 0 0 3 3 3 1 Dolichyl-phosphate-mannose-protein mannosyltransferase NTP_transferase PF00483.23 gi|568163250|ref|YP_008946584.1| - 4.2e-28 98.6 0.0 4.9e-28 98.4 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|568163250|ref|YP_008946584.1| - 3.9e-09 37.1 0.0 4.4e-09 36.9 0.0 1.3 1 1 0 1 1 1 1 MobA-like NTP transferase domain TPP_enzyme_N PF02776.18 gi|568163250|ref|YP_008946584.1| - 0.1 12.2 0.0 0.15 11.7 0.0 1.2 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Epimerase PF01370.21 gi|568163251|ref|YP_008946585.1| - 2.5e-22 79.5 0.0 4.1e-22 78.8 0.0 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|568163251|ref|YP_008946585.1| - 1.6e-19 70.5 0.0 4.8e-19 68.9 0.0 1.8 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase UDPG_MGDP_dh_N PF03721.14 gi|568163251|ref|YP_008946585.1| - 0.0013 18.3 0.0 0.0025 17.4 0.0 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Polysacc_synt_2 PF02719.15 gi|568163251|ref|YP_008946585.1| - 0.003 16.8 0.0 0.0057 15.8 0.0 1.4 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 gi|568163251|ref|YP_008946585.1| - 0.0036 16.4 0.0 0.0086 15.2 0.0 1.6 1 1 0 1 1 1 1 RmlD substrate binding domain Glyco_transf_4 PF13439.6 gi|568163251|ref|YP_008946585.1| - 0.053 13.5 0.1 0.14 12.2 0.0 1.6 2 0 0 2 2 2 0 Glycosyltransferase Family 4 BcrAD_BadFG PF01869.20 gi|568163252|ref|YP_008946586.1| - 3.2e-40 138.3 1.4 3.9e-40 138.0 1.4 1.1 1 0 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family ROK PF00480.20 gi|568163252|ref|YP_008946586.1| - 0.0018 17.8 0.4 0.83 9.1 0.1 2.2 2 0 0 2 2 2 2 ROK family G_glu_transpept PF01019.21 gi|568163253|ref|YP_008946587.1| - 6.6e-74 249.5 0.0 9.7e-74 249.0 0.0 1.3 1 0 0 1 1 1 1 Gamma-glutamyltranspeptidase MazG PF03819.17 gi|568163255|ref|YP_008946589.1| - 8.3e-14 51.5 0.5 1.1e-13 51.1 0.5 1.2 1 0 0 1 1 1 1 MazG nucleotide pyrophosphohydrolase domain MazG-like PF12643.7 gi|568163255|ref|YP_008946589.1| - 5.5e-07 29.7 1.0 6.6e-07 29.5 0.1 1.5 2 0 0 2 2 2 1 MazG-like family PRA-PH PF01503.17 gi|568163255|ref|YP_008946589.1| - 2.9e-05 24.4 1.6 4.3e-05 23.9 1.6 1.3 1 1 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase UpxZ PF06603.11 gi|568163255|ref|YP_008946589.1| - 0.036 14.3 0.1 0.04 14.2 0.1 1.1 1 0 0 1 1 1 0 UpxZ family of transcription anti-terminator antagonists Helicase_RecD PF05127.14 gi|568163256|ref|YP_008946590.1| - 2.1e-48 164.5 0.0 3.5e-48 163.8 0.0 1.4 1 0 0 1 1 1 1 Helicase GNAT_acetyltr_2 PF13718.6 gi|568163256|ref|YP_008946590.1| - 8e-35 120.3 0.0 8.9e-26 90.7 0.0 2.3 1 1 1 2 2 2 2 GNAT acetyltransferase 2 DUF1726 PF08351.11 gi|568163256|ref|YP_008946590.1| - 3.4e-26 91.0 0.1 8.3e-26 89.8 0.1 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF1726) AAA_30 PF13604.6 gi|568163256|ref|YP_008946590.1| - 0.0006 19.6 0.0 0.0019 17.9 0.0 1.8 1 1 1 2 2 2 1 AAA domain Acetyltransf_1 PF00583.25 gi|568163256|ref|YP_008946590.1| - 0.0015 18.7 0.0 0.0039 17.4 0.0 1.8 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|568163256|ref|YP_008946590.1| - 0.0035 17.7 0.0 0.015 15.7 0.0 2.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|568163256|ref|YP_008946590.1| - 0.047 13.6 0.0 0.17 11.8 0.0 1.9 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain YfhO PF09586.10 gi|568163257|ref|YP_008946591.1| - 2.9 6.0 9.6 3.8 5.6 9.6 1.1 1 0 0 1 1 1 0 Bacterial membrane protein YfhO YfdX PF10938.8 gi|568163258|ref|YP_008946592.1| - 0.00084 19.3 0.1 0.0039 17.1 0.1 1.9 1 1 1 2 2 2 1 YfdX protein Exonuc_VII_S PF02609.16 gi|568163258|ref|YP_008946592.1| - 0.016 15.3 0.6 0.097 12.7 0.0 2.4 2 1 1 3 3 3 0 Exonuclease VII small subunit AA_permease_2 PF13520.6 gi|568163259|ref|YP_008946593.1| - 2.8e-13 49.5 47.5 6e-13 48.4 47.5 1.5 1 1 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|568163259|ref|YP_008946593.1| - 1.6e-11 43.5 42.2 5.6e-11 41.7 41.0 2.2 1 1 0 1 1 1 1 Amino acid permease DUF2583 PF10762.9 gi|568163259|ref|YP_008946593.1| - 0.064 13.7 1.0 0.064 13.7 1.0 3.9 3 1 1 4 4 4 0 Protein of unknown function (DUF2583) PHO4 PF01384.20 gi|568163260|ref|YP_008946594.1| - 0.0029 16.7 1.7 0.0031 16.6 1.7 1.0 1 0 0 1 1 1 1 Phosphate transporter family DUF2614 PF11023.8 gi|568163260|ref|YP_008946594.1| - 0.054 13.6 2.1 0.063 13.4 2.1 1.0 1 0 0 1 1 1 0 Zinc-ribbon containing domain ABC_tran PF00005.27 gi|568163261|ref|YP_008946595.1| - 2.8e-27 95.9 0.0 4.1e-27 95.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|568163261|ref|YP_008946595.1| - 4.3e-20 72.0 0.0 8e-20 71.1 0.0 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region SMC_N PF02463.19 gi|568163261|ref|YP_008946595.1| - 0.0011 18.5 0.2 0.012 15.1 0.2 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|568163261|ref|YP_008946595.1| - 0.0021 17.9 0.5 0.92 9.3 0.0 2.4 2 1 1 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 gi|568163261|ref|YP_008946595.1| - 0.012 16.1 0.1 0.018 15.5 0.1 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_29 PF13555.6 gi|568163261|ref|YP_008946595.1| - 0.013 15.2 0.1 0.029 14.1 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|568163261|ref|YP_008946595.1| - 0.022 15.0 2.2 0.2 11.9 2.2 2.1 1 1 0 1 1 1 0 AAA domain ATPase PF06745.13 gi|568163261|ref|YP_008946595.1| - 0.024 14.0 0.1 0.049 13.0 0.1 1.5 1 0 0 1 1 1 0 KaiC NB-ARC PF00931.22 gi|568163261|ref|YP_008946595.1| - 0.041 13.1 0.3 0.081 12.1 0.3 1.4 1 0 0 1 1 1 0 NB-ARC domain PhoH PF02562.16 gi|568163261|ref|YP_008946595.1| - 0.099 12.1 0.0 0.19 11.2 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein ABC_tran PF00005.27 gi|568163262|ref|YP_008946596.1| - 2.6e-25 89.5 0.0 3.6e-25 89.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|568163262|ref|YP_008946596.1| - 7.1e-19 68.1 0.0 1.1e-18 67.4 0.0 1.3 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|568163262|ref|YP_008946596.1| - 6.3e-09 36.1 1.7 2.3e-06 27.7 0.1 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|568163262|ref|YP_008946596.1| - 1.7e-06 27.7 0.7 0.00037 20.0 0.1 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|568163262|ref|YP_008946596.1| - 0.00032 20.4 0.4 0.00073 19.2 0.1 1.7 2 0 0 2 2 2 1 P-loop containing region of AAA domain TniB PF05621.11 gi|568163262|ref|YP_008946596.1| - 0.082 12.3 0.3 0.33 10.3 0.1 1.9 2 0 0 2 2 2 0 Bacterial TniB protein PRK PF00485.18 gi|568163262|ref|YP_008946596.1| - 0.15 11.8 0.0 0.22 11.3 0.0 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_23 PF13476.6 gi|568163262|ref|YP_008946596.1| - 0.17 12.3 0.0 0.31 11.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 gi|568163262|ref|YP_008946596.1| - 0.21 10.9 0.2 0.57 9.4 0.2 1.6 1 1 0 1 1 1 0 Zeta toxin BPD_transp_1 PF00528.22 gi|568163263|ref|YP_008946597.1| - 8.3e-13 48.5 17.9 8.3e-13 48.5 17.9 1.9 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|568163263|ref|YP_008946597.1| - 0.023 14.6 0.2 0.13 12.2 0.2 2.4 1 0 0 1 1 1 0 N-terminal TM domain of oligopeptide transport permease C 2-oxogl_dehyd_N PF16078.5 gi|568163263|ref|YP_008946597.1| - 0.026 14.1 1.2 0.093 12.3 1.2 2.0 1 0 0 1 1 1 0 2-oxoglutarate dehydrogenase N-terminus BPD_transp_1 PF00528.22 gi|568163264|ref|YP_008946598.1| - 4.4e-36 124.4 13.7 4.4e-36 124.4 13.7 2.5 2 1 1 3 3 3 1 Binding-protein-dependent transport system inner membrane component Phenyl_P_gamma PF09662.10 gi|568163264|ref|YP_008946598.1| - 0.13 12.4 0.0 0.23 11.7 0.0 1.3 1 0 0 1 1 1 0 Phenylphosphate carboxylase gamma subunit (Phenyl_P_gamma) FixP_N PF14715.6 gi|568163264|ref|YP_008946598.1| - 2.5 7.9 8.2 4.9 7.0 0.1 3.6 3 0 0 3 3 3 0 N-terminal domain of cytochrome oxidase-cbb3, FixP SBP_bac_5 PF00496.22 gi|568163265|ref|YP_008946599.1| - 1e-22 80.7 0.2 5.9e-16 58.4 0.1 3.3 3 0 0 3 3 3 3 Bacterial extracellular solute-binding proteins, family 5 Middle MG2 PF01835.19 gi|568163265|ref|YP_008946599.1| - 4.8e-05 23.7 0.1 0.00015 22.1 0.0 1.9 2 0 0 2 2 1 1 MG2 domain FlgD_ig PF13860.6 gi|568163265|ref|YP_008946599.1| - 0.00013 21.7 0.2 0.00036 20.4 0.2 1.7 1 0 0 1 1 1 1 FlgD Ig-like domain Wzt_C PF14524.6 gi|568163265|ref|YP_008946599.1| - 0.0057 16.7 0.1 0.019 15.0 0.0 1.9 2 0 0 2 2 2 1 Wzt C-terminal domain Big_6 PF17936.1 gi|568163265|ref|YP_008946599.1| - 0.054 13.8 0.1 0.14 12.5 0.1 1.7 1 0 0 1 1 1 0 Bacterial Ig domain KH_dom-like PF14714.6 gi|568163265|ref|YP_008946599.1| - 0.061 13.6 0.0 0.16 12.3 0.0 1.6 1 0 0 1 1 1 0 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CEND1 PF15677.5 gi|568163265|ref|YP_008946599.1| - 0.064 13.8 0.2 0.11 13.1 0.2 1.3 1 0 0 1 1 1 0 Cell cycle exit and neuronal differentiation protein 1 AglB_L1 PF18079.1 gi|568163265|ref|YP_008946599.1| - 0.074 13.3 0.2 0.26 11.6 0.2 1.9 1 0 0 1 1 1 0 Archaeal glycosylation protein B long peripheral domain Orf78 PF06024.12 gi|568163265|ref|YP_008946599.1| - 0.091 13.1 0.0 0.27 11.6 0.0 1.8 1 0 0 1 1 1 0 Orf78 (ac78) Stevor PF17410.2 gi|568163265|ref|YP_008946599.1| - 0.51 9.8 2.6 0.87 9.1 2.6 1.3 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame RIFIN PF02009.16 gi|568163265|ref|YP_008946599.1| - 0.57 10.0 1.6 0.88 9.4 1.6 1.2 1 0 0 1 1 1 0 Rifin TMEM154 PF15102.6 gi|568163265|ref|YP_008946599.1| - 0.79 9.6 7.0 1.4 8.9 7.0 1.4 1 0 0 1 1 1 0 TMEM154 protein family EphA2_TM PF14575.6 gi|568163265|ref|YP_008946599.1| - 2.1 9.3 5.4 79 4.2 0.0 2.6 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain PCMT PF01135.19 gi|568163266|ref|YP_008946600.1| - 5.2e-42 144.0 0.0 6.5e-42 143.7 0.0 1.0 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RrnaAD PF00398.20 gi|568163266|ref|YP_008946600.1| - 8.7e-07 28.3 0.0 1.5e-06 27.5 0.0 1.3 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase PrmA PF06325.13 gi|568163266|ref|YP_008946600.1| - 3.3e-05 23.4 0.0 4.4e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_31 PF13847.6 gi|568163266|ref|YP_008946600.1| - 6.2e-05 22.8 0.0 7.7e-05 22.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|568163266|ref|YP_008946600.1| - 8.1e-05 23.3 0.0 0.00014 22.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain DOT1 PF08123.13 gi|568163266|ref|YP_008946600.1| - 0.00016 21.3 0.1 0.00025 20.7 0.1 1.2 1 0 0 1 1 1 1 Histone methylation protein DOT1 GCD14 PF08704.10 gi|568163266|ref|YP_008946600.1| - 0.00016 21.4 0.0 0.00024 20.8 0.0 1.2 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit MTS PF05175.14 gi|568163266|ref|YP_008946600.1| - 0.0002 21.0 0.0 0.0003 20.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_23 PF13489.6 gi|568163266|ref|YP_008946600.1| - 0.0016 18.3 0.0 0.0022 17.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_3 PF01596.17 gi|568163266|ref|YP_008946600.1| - 0.0017 17.6 0.1 0.0024 17.1 0.1 1.2 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_18 PF12847.7 gi|568163266|ref|YP_008946600.1| - 0.0041 17.1 0.0 0.0067 16.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Fibrillarin PF01269.17 gi|568163266|ref|YP_008946600.1| - 0.0051 16.0 0.0 0.008 15.3 0.0 1.3 1 0 0 1 1 1 1 Fibrillarin Methyltransf_11 PF08241.12 gi|568163266|ref|YP_008946600.1| - 0.014 16.0 0.0 0.031 14.9 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain CMAS PF02353.20 gi|568163266|ref|YP_008946600.1| - 0.025 13.9 0.0 0.063 12.6 0.0 1.5 2 0 0 2 2 2 0 Mycolic acid cyclopropane synthetase Methyltransf_24 PF13578.6 gi|568163266|ref|YP_008946600.1| - 0.15 13.1 0.0 0.27 12.3 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_5 PF01795.19 gi|568163266|ref|YP_008946600.1| - 0.22 11.0 0.0 0.31 10.5 0.0 1.1 1 0 0 1 1 1 0 MraW methylase family DUF87 PF01935.17 gi|568163267|ref|YP_008946601.1| - 1.5e-16 61.2 3.7 5e-16 59.5 1.0 2.5 1 1 1 2 2 2 1 Helicase HerA, central domain DUF1474 PF07342.11 gi|568163267|ref|YP_008946601.1| - 0.11 13.1 0.1 3.2 8.3 0.1 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1474) NurA PF09376.10 gi|568163268|ref|YP_008946602.1| - 3.1e-09 36.9 0.1 7.1e-05 22.6 0.0 2.1 1 1 1 2 2 2 2 NurA domain ThiP_synth PF10120.9 gi|568163269|ref|YP_008946603.1| - 6.1e-45 152.8 0.1 9.5e-45 152.2 0.1 1.3 1 0 0 1 1 1 1 Thiamine-phosphate synthase HTH_23 PF13384.6 gi|568163269|ref|YP_008946603.1| - 0.00079 19.2 0.0 0.0018 18.0 0.0 1.6 1 0 0 1 1 1 1 Homeodomain-like domain HTH_3 PF01381.22 gi|568163269|ref|YP_008946603.1| - 0.0012 18.8 0.2 0.0036 17.3 0.2 1.8 1 0 0 1 1 1 1 Helix-turn-helix RepB PF07506.11 gi|568163269|ref|YP_008946603.1| - 0.0019 18.3 0.0 0.0085 16.2 0.0 2.0 2 1 0 2 2 2 1 RepB plasmid partitioning protein HTH_37 PF13744.6 gi|568163269|ref|YP_008946603.1| - 0.0026 17.7 0.1 0.0054 16.7 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4 PF04545.16 gi|568163269|ref|YP_008946603.1| - 0.01 15.4 0.0 0.023 14.2 0.0 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 MA3 PF02847.17 gi|568163269|ref|YP_008946603.1| - 0.012 15.6 0.9 0.025 14.6 0.1 1.9 2 0 0 2 2 2 0 MA3 domain HTH_38 PF13936.6 gi|568163269|ref|YP_008946603.1| - 0.021 14.5 0.0 0.086 12.6 0.0 2.1 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.6 gi|568163269|ref|YP_008946603.1| - 0.037 13.6 0.0 0.11 12.0 0.0 1.9 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding INTS5_N PF14837.6 gi|568163269|ref|YP_008946603.1| - 0.046 13.3 0.0 0.073 12.7 0.0 1.3 1 0 0 1 1 1 0 Integrator complex subunit 5 N-terminus HTH_5 PF01022.20 gi|568163269|ref|YP_008946603.1| - 0.053 13.4 0.0 0.16 11.8 0.0 1.8 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_Tnp_ISL3 PF13542.6 gi|568163269|ref|YP_008946603.1| - 0.054 12.9 0.0 0.17 11.3 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 Sigma70_r4_2 PF08281.12 gi|568163269|ref|YP_008946603.1| - 0.11 12.2 0.0 0.21 11.3 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 Terminase_5 PF06056.12 gi|568163269|ref|YP_008946603.1| - 0.14 12.1 0.0 0.28 11.1 0.0 1.5 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) HTH_31 PF13560.6 gi|568163269|ref|YP_008946603.1| - 0.22 11.9 0.0 0.49 10.8 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Peptidase_M50 PF02163.22 gi|568163271|ref|YP_008946606.1| - 4.2e-07 29.5 6.9 0.00019 20.8 2.5 3.0 2 1 1 3 3 3 3 Peptidase family M50 DUF4492 PF14899.6 gi|568163271|ref|YP_008946606.1| - 0.07 13.1 1.4 0.18 11.8 1.4 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4492) Rhomboid PF01694.22 gi|568163272|ref|YP_008946607.1| - 1.1e-21 77.4 5.1 1.1e-21 77.4 5.1 1.5 2 0 0 2 2 2 1 Rhomboid family PTS_EIIC_2 PF13303.6 gi|568163272|ref|YP_008946607.1| - 0.022 13.8 0.4 0.022 13.8 0.4 1.9 1 1 0 1 1 1 0 Phosphotransferase system, EIIC DUF4203 PF13886.6 gi|568163272|ref|YP_008946607.1| - 0.18 11.5 11.0 0.021 14.5 1.6 2.8 2 1 1 3 3 3 0 Domain of unknown function (DUF4203) TRIQK PF15168.6 gi|568163273|ref|YP_008946608.1| - 4.8 7.1 6.3 8.1 6.4 0.6 2.0 1 1 1 2 2 2 0 Triple QxxK/R motif-containing protein family AAA_18 PF13238.6 gi|568163274|ref|YP_008946609.1| - 1.3e-22 80.7 0.2 2.3e-22 79.9 0.1 1.4 2 0 0 2 2 1 1 AAA domain AAA_17 PF13207.6 gi|568163274|ref|YP_008946609.1| - 2.2e-07 31.4 0.0 8e-07 29.6 0.0 2.0 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|568163274|ref|YP_008946609.1| - 2.6e-07 31.1 0.1 1.2e-06 29.0 0.0 1.9 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 gi|568163274|ref|YP_008946609.1| - 4.9e-07 29.8 0.0 9.5e-07 28.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_33 PF13671.6 gi|568163274|ref|YP_008946609.1| - 3.3e-06 27.3 0.0 3.9e-05 23.8 0.0 2.1 2 0 0 2 2 2 1 AAA domain SKI PF01202.22 gi|568163274|ref|YP_008946609.1| - 2.3e-05 24.6 0.1 4e-05 23.8 0.1 1.6 1 1 0 1 1 1 1 Shikimate kinase AAA_28 PF13521.6 gi|568163274|ref|YP_008946609.1| - 0.00012 22.4 0.9 0.00031 21.0 0.5 1.8 1 1 0 1 1 1 1 AAA domain KTI12 PF08433.10 gi|568163274|ref|YP_008946609.1| - 0.00015 21.3 0.2 0.00025 20.6 0.2 1.8 1 1 0 1 1 1 1 Chromatin associated protein KTI12 AAA_22 PF13401.6 gi|568163274|ref|YP_008946609.1| - 0.00033 20.9 0.3 0.00057 20.2 0.2 1.8 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|568163274|ref|YP_008946609.1| - 0.00056 20.3 0.1 0.00089 19.7 0.1 1.7 1 1 0 1 1 1 1 AAA ATPase domain T2SSE PF00437.20 gi|568163274|ref|YP_008946609.1| - 0.0007 18.7 0.1 0.0012 17.9 0.1 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein NTPase_1 PF03266.15 gi|568163274|ref|YP_008946609.1| - 0.002 18.1 1.4 0.0056 16.6 0.1 2.2 2 1 0 2 2 2 1 NTPase APS_kinase PF01583.20 gi|568163274|ref|YP_008946609.1| - 0.0021 18.0 0.2 0.011 15.6 0.1 2.1 2 1 0 2 2 2 1 Adenylylsulphate kinase Hydin_ADK PF17213.3 gi|568163274|ref|YP_008946609.1| - 0.0022 18.3 0.0 0.0038 17.5 0.0 1.4 1 0 0 1 1 1 1 Hydin Adenylate kinase-like domain DUF2075 PF09848.9 gi|568163274|ref|YP_008946609.1| - 0.0027 17.0 0.0 0.0032 16.8 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) RuvB_N PF05496.12 gi|568163274|ref|YP_008946609.1| - 0.0032 17.2 0.0 0.0051 16.6 0.0 1.4 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain Zeta_toxin PF06414.12 gi|568163274|ref|YP_008946609.1| - 0.0034 16.7 0.1 0.0094 15.2 0.1 1.9 1 1 0 1 1 1 1 Zeta toxin PRK PF00485.18 gi|568163274|ref|YP_008946609.1| - 0.0038 17.0 0.0 0.012 15.3 0.0 1.8 1 1 1 2 2 2 1 Phosphoribulokinase / Uridine kinase family Rad17 PF03215.15 gi|568163274|ref|YP_008946609.1| - 0.0044 17.0 0.4 0.037 14.0 0.3 2.1 1 1 1 2 2 2 1 Rad17 P-loop domain Cytidylate_kin PF02224.18 gi|568163274|ref|YP_008946609.1| - 0.0054 16.5 0.0 0.031 14.0 0.0 2.0 2 0 0 2 2 2 1 Cytidylate kinase AAA_14 PF13173.6 gi|568163274|ref|YP_008946609.1| - 0.0058 16.7 0.7 0.011 15.8 0.1 1.7 2 0 0 2 2 2 1 AAA domain RNA_helicase PF00910.22 gi|568163274|ref|YP_008946609.1| - 0.0076 16.6 0.0 0.019 15.3 0.0 1.8 1 1 0 1 1 1 1 RNA helicase AAA_19 PF13245.6 gi|568163274|ref|YP_008946609.1| - 0.012 15.9 0.1 0.038 14.3 0.1 1.8 2 0 0 2 2 2 0 AAA domain Cytidylate_kin2 PF13189.6 gi|568163274|ref|YP_008946609.1| - 0.013 15.6 0.1 0.044 13.9 0.0 1.9 2 1 0 2 2 2 0 Cytidylate kinase-like family ADK PF00406.22 gi|568163274|ref|YP_008946609.1| - 0.02 15.0 0.2 0.08 13.0 0.0 2.1 1 1 0 2 2 2 0 Adenylate kinase Thymidylate_kin PF02223.17 gi|568163274|ref|YP_008946609.1| - 0.021 14.5 0.8 0.54 9.9 0.1 2.3 1 1 0 2 2 2 0 Thymidylate kinase AAA_3 PF07726.11 gi|568163274|ref|YP_008946609.1| - 0.022 14.6 0.0 0.05 13.5 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 gi|568163274|ref|YP_008946609.1| - 0.026 14.2 0.5 0.036 13.8 0.5 1.4 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|568163274|ref|YP_008946609.1| - 0.027 14.2 0.2 0.059 13.1 0.2 1.6 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|568163274|ref|YP_008946609.1| - 0.035 13.8 0.3 0.15 11.8 0.1 2.0 1 1 0 2 2 2 0 IstB-like ATP binding protein Viral_helicase1 PF01443.18 gi|568163274|ref|YP_008946609.1| - 0.042 13.6 0.0 0.23 11.2 0.0 2.0 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase CPT PF07931.12 gi|568163274|ref|YP_008946609.1| - 0.045 13.6 0.0 0.061 13.2 0.0 1.4 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein MeaB PF03308.16 gi|568163274|ref|YP_008946609.1| - 0.054 12.5 0.9 0.12 11.3 0.2 1.8 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB DUF4375 PF14300.6 gi|568163274|ref|YP_008946609.1| - 0.061 13.6 1.1 0.26 11.6 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4375) dNK PF01712.19 gi|568163274|ref|YP_008946609.1| - 0.074 12.9 2.3 0.24 11.3 0.9 2.3 1 1 2 3 3 3 0 Deoxynucleoside kinase cobW PF02492.19 gi|568163274|ref|YP_008946609.1| - 0.081 12.5 1.7 0.25 10.9 0.4 2.2 1 1 1 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain NACHT PF05729.12 gi|568163274|ref|YP_008946609.1| - 0.1 12.5 0.1 0.24 11.3 0.1 1.6 1 0 0 1 1 1 0 NACHT domain AAA_7 PF12775.7 gi|568163274|ref|YP_008946609.1| - 0.11 12.0 1.0 0.17 11.4 0.1 1.8 2 1 0 2 2 2 0 P-loop containing dynein motor region Sigma54_activat PF00158.26 gi|568163274|ref|YP_008946609.1| - 0.13 11.9 0.0 0.77 9.4 0.0 2.0 2 0 0 2 2 2 0 Sigma-54 interaction domain ScsC_N PF18312.1 gi|568163274|ref|YP_008946609.1| - 0.44 10.4 3.2 0.22 11.4 0.5 2.0 2 0 0 2 2 1 0 Copper resistance protein ScsC N-terminal domain CbiA PF01656.23 gi|568163274|ref|YP_008946609.1| - 1.1 9.4 4.0 2.4 8.2 4.0 2.2 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|568163275|ref|YP_008946610.1| - 1e-97 326.4 0.1 1.2e-97 326.2 0.1 1.0 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 gi|568163275|ref|YP_008946610.1| - 6.2e-13 48.9 0.0 4e-12 46.3 0.0 2.1 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Fer4_NifH PF00142.18 gi|568163275|ref|YP_008946610.1| - 1.6e-10 40.9 0.1 3.7e-05 23.3 0.1 2.3 2 1 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_31 PF13614.6 gi|568163275|ref|YP_008946610.1| - 1.9e-09 37.7 0.4 6.2e-07 29.5 0.1 2.2 2 0 0 2 2 2 2 AAA domain ArsA_ATPase PF02374.15 gi|568163275|ref|YP_008946610.1| - 4.3e-06 26.1 0.3 5.5e-05 22.5 0.3 2.1 2 0 0 2 2 2 1 Anion-transporting ATPase MipZ PF09140.11 gi|568163275|ref|YP_008946610.1| - 4.4e-05 22.9 0.0 6.2e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 ATPase MipZ AAA_25 PF13481.6 gi|568163275|ref|YP_008946610.1| - 0.00038 20.1 0.0 0.00062 19.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain MeaB PF03308.16 gi|568163275|ref|YP_008946610.1| - 0.00038 19.5 0.1 0.00067 18.7 0.1 1.3 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_26 PF13500.6 gi|568163275|ref|YP_008946610.1| - 0.0023 17.8 1.1 0.5 10.2 0.0 2.2 2 0 0 2 2 2 2 AAA domain DUF4898 PF16239.5 gi|568163275|ref|YP_008946610.1| - 0.016 15.1 0.0 0.016 15.1 0.0 2.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4898) IstB_IS21 PF01695.17 gi|568163275|ref|YP_008946610.1| - 0.19 11.4 0.0 0.35 10.6 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein DUF4364 PF14277.6 gi|568163276|ref|YP_008946611.1| - 0.0015 18.3 0.1 0.0016 18.2 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4364) Mnd1 PF03962.15 gi|568163276|ref|YP_008946611.1| - 0.017 15.4 0.2 1.4 9.2 0.2 2.1 1 1 0 1 1 1 0 Mnd1 HTH domain DUF1717 PF05414.11 gi|568163276|ref|YP_008946611.1| - 0.067 13.6 0.1 0.075 13.5 0.1 1.1 1 0 0 1 1 1 0 Viral domain of unknown function (DUF1717) TrmB PF01978.19 gi|568163277|ref|YP_008946612.1| - 1.4e-12 47.3 0.1 2e-12 46.8 0.1 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|568163277|ref|YP_008946612.1| - 2.6e-07 30.4 0.0 4e-07 29.8 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.20 gi|568163277|ref|YP_008946612.1| - 9.2e-07 28.6 0.5 2.2e-05 24.2 0.3 2.6 2 1 1 3 3 3 1 Bacterial regulatory protein, arsR family TFIIE_alpha PF02002.17 gi|568163277|ref|YP_008946612.1| - 1.9e-06 27.7 0.9 2.4e-06 27.3 0.9 1.1 1 0 0 1 1 1 1 TFIIE alpha subunit MarR PF01047.22 gi|568163277|ref|YP_008946612.1| - 0.00028 20.8 0.1 0.00041 20.2 0.1 1.3 1 0 0 1 1 1 1 MarR family Fe_dep_repress PF01325.19 gi|568163277|ref|YP_008946612.1| - 0.00052 20.2 0.1 0.0013 18.9 0.0 1.8 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain Rrf2 PF02082.20 gi|568163277|ref|YP_008946612.1| - 0.00064 20.0 0.0 0.0012 19.1 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator HTH_27 PF13463.6 gi|568163277|ref|YP_008946612.1| - 0.00081 19.8 0.1 0.0019 18.6 0.0 1.7 2 0 0 2 2 2 1 Winged helix DNA-binding domain PadR PF03551.14 gi|568163277|ref|YP_008946612.1| - 0.0022 17.9 0.0 0.0046 16.9 0.0 1.7 1 1 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_34 PF13601.6 gi|568163277|ref|YP_008946612.1| - 0.0023 18.1 0.1 0.0036 17.4 0.1 1.4 1 1 0 1 1 1 1 Winged helix DNA-binding domain DUF2250 PF10007.9 gi|568163277|ref|YP_008946612.1| - 0.0037 17.4 0.2 0.0057 16.8 0.2 1.6 1 1 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_24 PF13412.6 gi|568163277|ref|YP_008946612.1| - 0.0047 16.5 0.3 0.0092 15.5 0.3 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|568163277|ref|YP_008946612.1| - 0.0079 16.2 0.0 0.018 15.1 0.0 1.7 1 1 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 gi|568163277|ref|YP_008946612.1| - 0.017 14.9 0.0 0.15 11.9 0.0 2.1 1 1 0 1 1 1 0 Homeodomain-like domain tRNA-synt_His PF13393.6 gi|568163277|ref|YP_008946612.1| - 0.031 13.6 0.0 0.031 13.6 0.0 1.2 1 0 0 1 1 1 0 Histidyl-tRNA synthetase DUF4423 PF14394.6 gi|568163277|ref|YP_008946612.1| - 0.032 14.0 0.2 0.052 13.2 0.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4423) DUF2680 PF10925.8 gi|568163277|ref|YP_008946612.1| - 0.099 12.7 0.1 0.28 11.2 0.1 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF2680) 5-FTHF_cyc-lig PF01812.20 gi|568163278|ref|YP_008946613.1| - 7.5e-34 117.2 0.0 9.7e-34 116.8 0.0 1.1 1 0 0 1 1 1 1 5-formyltetrahydrofolate cyclo-ligase family YcaO PF02624.16 gi|568163278|ref|YP_008946613.1| - 0.22 10.7 0.0 0.32 10.2 0.0 1.2 1 0 0 1 1 1 0 YcaO cyclodehydratase, ATP-ad Mg2+-binding LysE PF01810.18 gi|568163279|ref|YP_008946614.1| - 1.9e-12 47.1 15.4 2.9e-12 46.4 15.4 1.2 1 0 0 1 1 1 1 LysE type translocator RALF PF05498.11 gi|568163279|ref|YP_008946614.1| - 0.17 12.8 0.1 0.43 11.6 0.0 1.7 2 0 0 2 2 2 0 Rapid ALkalinization Factor (RALF) DUF1129 PF06570.11 gi|568163279|ref|YP_008946614.1| - 3.5 7.1 9.7 0.061 12.8 1.8 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1129) DPM3 PF08285.11 gi|568163279|ref|YP_008946614.1| - 3.9 7.7 10.2 0.21 11.8 2.1 2.3 1 1 1 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) HTH_38 PF13936.6 gi|568163280|ref|YP_008946615.1| - 4.8e-19 67.9 6.0 1.2e-09 37.8 0.1 3.5 2 1 2 4 4 4 3 Helix-turn-helix domain HTH_7 PF02796.15 gi|568163280|ref|YP_008946615.1| - 1.6e-14 53.7 7.9 0.00077 19.5 0.7 3.2 3 0 0 3 3 3 3 Helix-turn-helix domain of resolvase HTH_23 PF13384.6 gi|568163280|ref|YP_008946615.1| - 1.5e-13 50.1 1.2 0.0004 20.1 0.0 3.2 3 0 0 3 3 3 3 Homeodomain-like domain GerE PF00196.19 gi|568163280|ref|YP_008946615.1| - 1.1e-09 37.6 1.6 0.0018 17.8 0.0 3.3 3 0 0 3 3 3 3 Bacterial regulatory proteins, luxR family Sigma70_r4_2 PF08281.12 gi|568163280|ref|YP_008946615.1| - 3.1e-09 36.4 1.2 0.0058 16.3 0.0 3.2 3 0 0 3 3 3 3 Sigma-70, region 4 HTH_29 PF13551.6 gi|568163280|ref|YP_008946615.1| - 2.8e-08 33.7 0.1 0.029 14.4 0.0 3.2 3 0 0 3 3 3 2 Winged helix-turn helix GcrA PF07750.11 gi|568163280|ref|YP_008946615.1| - 6.1e-08 33.2 0.6 0.0049 17.3 0.0 2.2 1 1 1 2 2 2 2 GcrA cell cycle regulator HTH_28 PF13518.6 gi|568163280|ref|YP_008946615.1| - 7.7e-08 32.3 0.1 0.023 14.8 0.0 2.6 3 0 0 3 3 2 2 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 gi|568163280|ref|YP_008946615.1| - 3.7e-07 29.5 0.0 0.00034 20.0 0.0 2.7 3 0 0 3 3 3 1 Helix-turn-helix domain of transposase family ISL3 HTH_24 PF13412.6 gi|568163280|ref|YP_008946615.1| - 1.9e-06 27.3 0.7 0.18 11.4 0.0 3.5 3 0 0 3 3 3 2 Winged helix-turn-helix DNA-binding CENP-B_N PF04218.13 gi|568163280|ref|YP_008946615.1| - 4.6e-06 26.2 1.9 0.0031 17.1 0.1 2.5 2 0 0 2 2 2 2 CENP-B N-terminal DNA-binding domain Sigma70_r4 PF04545.16 gi|568163280|ref|YP_008946615.1| - 1.3e-05 24.6 0.6 0.028 13.9 0.0 3.2 3 0 0 3 3 3 1 Sigma-70, region 4 Terminase_5 PF06056.12 gi|568163280|ref|YP_008946615.1| - 1.5e-05 24.8 0.2 0.49 10.3 0.0 3.1 3 0 0 3 3 3 2 Putative ATPase subunit of terminase (gpP-like) HTH_50 PF18024.1 gi|568163280|ref|YP_008946615.1| - 1.8e-05 24.2 2.0 0.057 13.0 0.0 3.1 3 0 0 3 3 3 1 Helix-turn-helix domain TnsD PF15978.5 gi|568163280|ref|YP_008946615.1| - 2.5e-05 23.5 3.8 0.0022 17.1 0.9 2.2 1 1 1 2 2 2 2 Tn7-like transposition protein D HTH_10 PF04967.12 gi|568163280|ref|YP_008946615.1| - 7.9e-05 22.4 1.1 0.21 11.4 0.0 3.3 3 0 0 3 3 3 1 HTH DNA binding domain Phage_antitermQ PF06530.12 gi|568163280|ref|YP_008946615.1| - 0.00033 20.6 3.0 0.42 10.5 0.1 2.9 1 1 2 3 3 3 2 Phage antitermination protein Q HTH_40 PF14493.6 gi|568163280|ref|YP_008946615.1| - 0.00039 20.8 1.4 0.18 12.3 0.4 2.8 1 1 1 2 2 2 1 Helix-turn-helix domain Recombinase PF07508.13 gi|568163280|ref|YP_008946615.1| - 0.00048 20.5 1.3 1.7 9.1 0.0 3.0 3 0 0 3 3 3 2 Recombinase HTH_Tnp_IS1 PF12759.7 gi|568163280|ref|YP_008946615.1| - 0.00073 19.1 0.1 0.79 9.4 0.0 2.5 2 0 0 2 2 2 2 InsA C-terminal domain HTH_3 PF01381.22 gi|568163280|ref|YP_008946615.1| - 0.0012 18.8 3.2 0.45 10.6 0.3 3.3 2 1 1 3 3 3 1 Helix-turn-helix DUF3791 PF12668.7 gi|568163280|ref|YP_008946615.1| - 0.0021 18.1 1.5 4.1 7.5 0.1 3.7 3 1 1 4 4 4 0 Protein of unknown function (DUF3791) TrmB PF01978.19 gi|568163280|ref|YP_008946615.1| - 0.0023 17.8 1.1 0.89 9.5 0.0 2.9 3 0 0 3 3 3 1 Sugar-specific transcriptional regulator TrmB HTH_35 PF13693.6 gi|568163280|ref|YP_008946615.1| - 0.0048 16.9 0.2 2.3 8.3 0.0 3.0 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding Mga PF05043.13 gi|568163280|ref|YP_008946615.1| - 0.0062 17.1 2.5 0.89 10.2 0.0 2.9 1 1 1 3 3 3 1 Mga helix-turn-helix domain PAX PF00292.18 gi|568163280|ref|YP_008946615.1| - 0.0068 16.3 0.3 0.045 13.7 0.1 2.2 1 1 2 3 3 3 1 'Paired box' domain HTH_Tnp_1 PF01527.20 gi|568163280|ref|YP_008946615.1| - 0.0068 16.7 0.0 0.28 11.5 0.0 2.6 2 1 1 3 3 3 1 Transposase HTH_5 PF01022.20 gi|568163280|ref|YP_008946615.1| - 0.0083 16.0 0.5 12 5.9 0.0 3.6 3 1 0 3 3 3 0 Bacterial regulatory protein, arsR family DUF433 PF04255.14 gi|568163280|ref|YP_008946615.1| - 0.0092 15.8 0.1 2.4 8.1 0.0 2.7 3 0 0 3 3 3 1 Protein of unknown function (DUF433) WYL_3 PF18488.1 gi|568163280|ref|YP_008946615.1| - 0.01 16.2 0.3 1.4 9.4 0.0 2.9 3 0 0 3 3 3 0 WYL domain Death PF00531.22 gi|568163280|ref|YP_008946615.1| - 0.011 15.9 0.1 1.6 8.9 0.0 2.7 1 1 0 2 2 2 0 Death domain DUF2089 PF09862.9 gi|568163280|ref|YP_008946615.1| - 0.011 15.7 1.4 0.031 14.3 0.5 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2089) HU-CCDC81_bac_2 PF18175.1 gi|568163280|ref|YP_008946615.1| - 0.015 15.1 0.4 0.76 9.7 0.1 2.4 2 0 0 2 2 2 0 CCDC81-like prokaryotic HU domain 2 ANT PF03374.14 gi|568163280|ref|YP_008946615.1| - 0.023 15.0 0.6 2.5 8.5 0.1 2.8 2 1 1 3 3 3 0 Phage antirepressor protein KilAC domain HTH_AsnC-type PF13404.6 gi|568163280|ref|YP_008946615.1| - 0.028 14.2 0.0 1.2 9.0 0.0 2.9 3 0 0 3 3 3 0 AsnC-type helix-turn-helix domain DUF3102 PF11300.8 gi|568163280|ref|YP_008946615.1| - 0.031 14.5 0.7 0.036 14.3 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3102) PIN_12 PF16289.5 gi|568163280|ref|YP_008946615.1| - 0.035 14.6 2.1 0.043 14.3 2.1 1.2 1 0 0 1 1 1 0 PIN domain KorB PF08535.10 gi|568163280|ref|YP_008946615.1| - 0.041 13.9 0.5 5.4 7.1 0.0 3.1 2 1 0 3 3 3 0 KorB domain RWP-RK PF02042.15 gi|568163280|ref|YP_008946615.1| - 0.041 13.9 0.6 1.8 8.6 0.0 2.6 2 0 0 2 2 2 0 RWP-RK domain Phage_terminase PF10668.9 gi|568163280|ref|YP_008946615.1| - 0.059 13.4 0.7 2.2 8.3 0.0 2.9 1 1 0 3 3 3 0 Phage terminase small subunit MarR_2 PF12802.7 gi|568163280|ref|YP_008946615.1| - 0.065 13.1 0.1 22 5.1 0.0 3.0 3 1 0 3 3 3 0 MarR family HTH_36 PF13730.6 gi|568163280|ref|YP_008946615.1| - 0.069 13.1 3.8 32 4.6 0.1 3.5 4 0 0 4 4 4 0 Helix-turn-helix domain HTH_22 PF13309.6 gi|568163280|ref|YP_008946615.1| - 0.12 12.5 1.6 48 4.1 0.1 3.6 2 1 1 3 3 3 0 HTH domain Trp_repressor PF01371.19 gi|568163280|ref|YP_008946615.1| - 0.14 12.3 1.2 16 5.7 0.1 2.8 1 1 2 3 3 3 0 Trp repressor protein NUMOD1 PF07453.13 gi|568163280|ref|YP_008946615.1| - 1.8 8.9 11.1 1.8 8.9 0.1 3.6 4 0 0 4 4 3 0 NUMOD1 domain tRNA-synt_1b PF00579.25 gi|568163281|ref|YP_008946616.1| - 5.3e-25 88.3 0.0 8.5e-25 87.7 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) Snf7 PF03357.21 gi|568163282|ref|YP_008946617.1| - 0.0011 18.6 1.1 0.0017 18.0 1.1 1.4 1 0 0 1 1 1 1 Snf7 LOH1CR12 PF10158.9 gi|568163282|ref|YP_008946617.1| - 0.0017 18.4 0.8 0.0039 17.2 0.6 1.7 1 1 0 1 1 1 1 Tumour suppressor protein BLOC1S3 PF15753.5 gi|568163282|ref|YP_008946617.1| - 0.047 13.8 0.1 0.083 13.0 0.1 1.4 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex 1 subunit 3 tRNA-synt_2c PF01411.19 gi|568163283|ref|YP_008946618.1| - 7.2e-16 57.8 0.3 1e-15 57.3 0.3 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (A) tRNA_SAD PF07973.14 gi|568163283|ref|YP_008946618.1| - 4.3e-13 49.1 0.8 4.3e-13 49.1 0.8 1.7 2 0 0 2 2 2 1 Threonyl and Alanyl tRNA synthetase second additional domain GtrA PF04138.14 gi|568163284|ref|YP_008946619.1| - 1.1e-19 70.7 11.3 1.6e-19 70.2 11.3 1.2 1 0 0 1 1 1 1 GtrA-like protein Aminotran_1_2 PF00155.21 gi|568163285|ref|YP_008946620.1| - 5.8e-11 42.2 0.0 2.1e-09 37.1 0.0 2.1 1 1 0 1 1 1 1 Aminotransferase class I and II HTH_10 PF04967.12 gi|568163286|ref|YP_008946621.1| - 2e-20 72.3 0.1 3.4e-20 71.6 0.1 1.4 1 0 0 1 1 1 1 HTH DNA binding domain HTH_24 PF13412.6 gi|568163286|ref|YP_008946621.1| - 6.9e-06 25.5 0.4 0.0018 17.8 0.1 2.8 3 0 0 3 3 3 2 Winged helix-turn-helix DNA-binding ENT PF03735.14 gi|568163286|ref|YP_008946621.1| - 0.013 15.5 1.0 0.15 12.2 1.1 2.6 2 1 0 2 2 2 0 ENT domain Mga PF05043.13 gi|568163286|ref|YP_008946621.1| - 0.047 14.3 0.6 0.3 11.7 0.6 2.2 1 1 0 1 1 1 0 Mga helix-turn-helix domain HTH_3 PF01381.22 gi|568163286|ref|YP_008946621.1| - 0.054 13.6 0.1 0.17 12.0 0.1 1.8 1 0 0 1 1 1 0 Helix-turn-helix MarR_2 PF12802.7 gi|568163286|ref|YP_008946621.1| - 0.089 12.7 0.0 0.92 9.4 0.0 2.2 2 0 0 2 2 2 0 MarR family Fer4 PF00037.27 gi|568163287|ref|YP_008946622.1| - 4.6e-14 51.5 13.6 4.3e-07 29.5 6.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|568163287|ref|YP_008946622.1| - 3.5e-11 43.5 27.6 2.9e-07 30.9 9.8 1.7 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|568163287|ref|YP_008946622.1| - 7.6e-09 35.6 6.2 1.1e-08 35.1 6.2 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|568163287|ref|YP_008946622.1| - 4.5e-08 33.1 7.4 9.1e-08 32.1 7.5 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|568163287|ref|YP_008946622.1| - 9.1e-08 32.1 6.3 1.3e-07 31.6 6.3 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|568163287|ref|YP_008946622.1| - 9.6e-08 31.8 13.3 0.00025 21.0 5.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|568163287|ref|YP_008946622.1| - 2.4e-05 24.8 9.6 0.031 14.8 0.3 2.3 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_16 PF13484.6 gi|568163287|ref|YP_008946622.1| - 3.7e-05 24.6 8.6 0.0077 17.1 3.0 2.2 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|568163287|ref|YP_008946622.1| - 5.4e-05 23.0 11.0 0.03 14.4 4.3 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|568163287|ref|YP_008946622.1| - 7.3e-05 23.1 7.6 0.0013 19.2 8.5 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|568163287|ref|YP_008946622.1| - 9e-05 22.9 1.1 0.35 11.5 0.6 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|568163287|ref|YP_008946622.1| - 0.00022 21.9 13.7 0.012 16.5 6.8 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|568163287|ref|YP_008946622.1| - 0.00029 21.1 8.2 0.045 14.3 3.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain ETF_QO PF05187.13 gi|568163287|ref|YP_008946622.1| - 0.0011 19.1 0.9 0.0012 18.9 0.9 1.1 1 0 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_18 PF13746.6 gi|568163287|ref|YP_008946622.1| - 0.0041 17.3 9.3 0.014 15.6 2.8 2.1 1 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|568163287|ref|YP_008946622.1| - 0.033 14.9 11.8 0.4 11.4 0.3 2.8 2 1 0 2 2 2 0 4Fe-4S single cluster domain DUF2761 PF10959.8 gi|568163287|ref|YP_008946622.1| - 0.056 13.4 0.0 0.072 13.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2761) Fer4_22 PF17179.4 gi|568163287|ref|YP_008946622.1| - 2.5 9.0 8.3 9 7.2 2.4 2.1 1 1 0 2 2 2 0 4Fe-4S dicluster domain DFP PF04127.15 gi|568163288|ref|YP_008946623.1| - 4.9e-59 199.3 0.3 2.7e-57 193.6 0.1 2.4 2 1 0 2 2 2 1 DNA / pantothenate metabolism flavoprotein Flavoprotein PF02441.19 gi|568163288|ref|YP_008946623.1| - 9e-41 139.3 0.5 1.7e-40 138.4 0.5 1.5 1 0 0 1 1 1 1 Flavoprotein ATP-synt_F PF01990.17 gi|568163288|ref|YP_008946623.1| - 0.015 15.6 0.6 1.1 9.6 0.0 3.3 3 2 0 3 3 3 0 ATP synthase (F/14-kDa) subunit FlpD PF02662.16 gi|568163288|ref|YP_008946623.1| - 0.17 11.9 0.0 1 9.4 0.0 2.2 2 0 0 2 2 2 0 Methyl-viologen-reducing hydrogenase, delta subunit Acetyltransf_1 PF00583.25 gi|568163289|ref|YP_008946624.1| - 4.7e-15 55.9 0.0 5.9e-15 55.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|568163289|ref|YP_008946624.1| - 5.9e-10 39.4 0.1 9.2e-10 38.8 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|568163289|ref|YP_008946624.1| - 2e-08 34.2 0.0 4.6e-08 33.1 0.0 1.6 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|568163289|ref|YP_008946624.1| - 5.4e-06 26.3 0.0 8.2e-06 25.7 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 gi|568163289|ref|YP_008946624.1| - 0.00096 19.2 0.0 0.0042 17.1 0.0 2.0 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|568163289|ref|YP_008946624.1| - 0.0053 16.4 0.0 0.012 15.3 0.0 1.5 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 gi|568163289|ref|YP_008946624.1| - 0.019 14.4 0.4 0.032 13.7 0.4 1.4 1 1 0 1 1 1 0 Putative acetyl-transferase Acetyltransf_4 PF13420.7 gi|568163289|ref|YP_008946624.1| - 0.058 13.5 1.4 1.2 9.2 1.4 2.5 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Metallophos_2 PF12850.7 gi|568163290|ref|YP_008946625.1| - 7e-06 26.3 0.0 9.1e-06 26.0 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos_3 PF14582.6 gi|568163290|ref|YP_008946625.1| - 1.8e-05 24.2 0.0 0.0025 17.2 0.0 2.1 1 1 1 2 2 2 2 Metallophosphoesterase, calcineurin superfamily Thr_dehydrat_C PF00585.18 gi|568163290|ref|YP_008946625.1| - 0.11 12.3 0.2 0.65 9.8 0.0 2.2 2 1 1 3 3 3 0 C-terminal regulatory domain of Threonine dehydratase CitG PF01874.16 gi|568163291|ref|YP_008946626.1| - 1.9e-34 119.6 0.0 2.1e-34 119.5 0.0 1.0 1 0 0 1 1 1 1 ATP:dephospho-CoA triphosphoribosyl transferase Lipoprotein_3 PF00938.17 gi|568163291|ref|YP_008946626.1| - 0.12 12.5 0.0 0.27 11.5 0.0 1.6 1 0 0 1 1 1 0 Lipoprotein NTP_transf_2 PF01909.23 gi|568163292|ref|YP_008946627.1| - 1.3e-08 35.0 0.2 2.8e-08 33.9 0.2 1.6 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|568163292|ref|YP_008946627.1| - 0.013 15.6 0.1 0.036 14.1 0.1 1.9 1 0 0 1 1 1 0 Polymerase beta, Nucleotidyltransferase DUF1464 PF07318.12 gi|568163293|ref|YP_008946628.1| - 1.5e-113 379.3 0.1 1.8e-113 379.0 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1464) PIN PF01850.21 gi|568164774|ref|YP_008946631.1| - 7.5e-11 42.6 3.0 4e-10 40.2 3.0 1.8 1 1 0 1 1 1 1 PIN domain DUF5615 PF18480.1 gi|568164774|ref|YP_008946631.1| - 0.014 15.1 0.1 0.027 14.2 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5615) Band_7 PF01145.25 gi|568164774|ref|YP_008946631.1| - 0.056 13.5 0.3 0.062 13.3 0.3 1.2 1 0 0 1 1 1 0 SPFH domain / Band 7 family Spore_YhcN_YlaJ PF09580.10 gi|568164774|ref|YP_008946631.1| - 0.082 13.0 1.5 0.23 11.5 0.1 2.1 3 0 0 3 3 3 0 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) VAPB_antitox PF02697.14 gi|568163294|ref|YP_008946632.1| - 6.6e-24 84.5 3.0 7.5e-24 84.3 3.0 1.0 1 0 0 1 1 1 1 Putative antitoxin DUF3387 PF11867.8 gi|568163294|ref|YP_008946632.1| - 0.0065 15.9 0.9 0.0074 15.7 0.9 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3387) DegV PF02645.16 gi|568163294|ref|YP_008946632.1| - 0.012 15.0 0.1 0.012 14.9 0.1 1.0 1 0 0 1 1 1 0 Uncharacterised protein, DegV family COG1307 SKA1 PF07160.12 gi|568163294|ref|YP_008946632.1| - 0.023 14.5 0.2 0.023 14.5 0.2 1.1 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 1 MatP_C PF17414.2 gi|568163294|ref|YP_008946632.1| - 0.024 14.8 0.2 0.07 13.3 0.0 1.7 1 1 1 2 2 2 0 MatP C-terminal ribbon-helix-helix domain VWA_N PF08399.11 gi|568163294|ref|YP_008946632.1| - 0.029 14.9 0.0 0.053 14.0 0.0 1.4 1 1 0 1 1 1 0 VWA N-terminal DUF5532 PF17673.1 gi|568163294|ref|YP_008946632.1| - 0.033 14.3 0.4 0.037 14.1 0.4 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5532) ATPase_2 PF01637.18 gi|568163295|ref|YP_008946634.1| - 1.6e-23 83.8 2.4 1.6e-23 83.8 2.4 3.1 2 2 0 2 2 2 1 ATPase domain predominantly from Archaea DUF234 PF03008.14 gi|568163295|ref|YP_008946634.1| - 8.1e-20 71.1 1.0 8.1e-20 71.1 1.0 2.5 3 0 0 3 3 3 1 Archaea bacterial proteins of unknown function AAA_14 PF13173.6 gi|568163295|ref|YP_008946634.1| - 3.7e-10 39.9 0.5 1.1e-09 38.5 0.2 2.0 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|568163295|ref|YP_008946634.1| - 2.4e-05 24.8 0.2 0.0021 18.5 0.2 2.4 1 1 0 1 1 1 1 AAA ATPase domain HTH_24 PF13412.6 gi|568163295|ref|YP_008946634.1| - 4.4e-05 22.9 0.2 0.00029 20.3 0.1 2.4 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding AAA_22 PF13401.6 gi|568163295|ref|YP_008946634.1| - 6.1e-05 23.3 0.0 0.00016 22.0 0.0 1.6 1 0 0 1 1 1 1 AAA domain HTH_5 PF01022.20 gi|568163295|ref|YP_008946634.1| - 0.00011 22.0 0.2 0.00031 20.5 0.0 1.9 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family MarR PF01047.22 gi|568163295|ref|YP_008946634.1| - 0.00012 21.9 0.0 0.00028 20.8 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_45 PF14947.6 gi|568163295|ref|YP_008946634.1| - 0.00018 21.4 2.0 0.0014 18.5 0.0 3.2 3 1 0 3 3 3 1 Winged helix-turn-helix TniB PF05621.11 gi|568163295|ref|YP_008946634.1| - 0.0002 20.9 0.2 0.0032 16.9 0.0 2.6 3 0 0 3 3 3 1 Bacterial TniB protein TrmB PF01978.19 gi|568163295|ref|YP_008946634.1| - 0.00072 19.4 0.2 0.0021 17.9 0.2 1.7 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|568163295|ref|YP_008946634.1| - 0.0034 17.2 0.0 0.0074 16.2 0.0 1.5 1 0 0 1 1 1 1 MarR family AAA PF00004.29 gi|568163295|ref|YP_008946634.1| - 0.0034 17.8 0.0 0.0069 16.8 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Sulfolobus_pRN PF05584.11 gi|568163295|ref|YP_008946634.1| - 0.0095 16.0 0.1 0.031 14.3 0.1 1.8 1 0 0 1 1 1 1 Sulfolobus plasmid regulatory protein HTH_IclR PF09339.10 gi|568163295|ref|YP_008946634.1| - 0.077 12.8 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain Roc PF08477.13 gi|568163295|ref|YP_008946634.1| - 0.093 13.0 0.0 0.2 11.8 0.0 1.5 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase HTH_29 PF13551.6 gi|568163295|ref|YP_008946634.1| - 0.17 11.9 0.0 0.43 10.6 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn helix ERGIC_N PF13850.6 gi|568164777|ref|YP_008946636.1| - 0.044 14.1 0.8 0.14 12.5 0.6 1.9 1 1 1 2 2 2 0 Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) IF-2B PF01008.17 gi|568163296|ref|YP_008946637.1| - 1.9e-74 250.4 0.1 2.3e-74 250.1 0.1 1.1 1 0 0 1 1 1 1 Initiation factor 2 subunit family DHHA1 PF02272.19 gi|568163297|ref|YP_008946638.1| - 2.8e-10 40.7 0.0 1.9e-09 38.1 0.0 2.2 2 0 0 2 2 2 1 DHHA1 domain DHH PF01368.20 gi|568163297|ref|YP_008946638.1| - 0.0055 16.9 0.0 0.01 16.0 0.0 1.4 1 0 0 1 1 1 1 DHH family Isochorismatase PF00857.20 gi|568163298|ref|YP_008946639.1| - 1.2e-37 129.8 0.0 1.4e-37 129.5 0.0 1.0 1 0 0 1 1 1 1 Isochorismatase family Endonuclease_5 PF04493.14 gi|568163299|ref|YP_008946640.1| - 1.6e-33 116.0 0.2 2.3e-33 115.5 0.2 1.2 1 0 0 1 1 1 1 Endonuclease V DUF5607 PF18355.1 gi|568163299|ref|YP_008946640.1| - 0.012 16.0 1.5 0.046 14.1 1.5 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF5607) DSPc PF00782.20 gi|568163300|ref|YP_008946641.1| - 9.3e-10 38.4 0.0 1.4e-09 37.8 0.0 1.3 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 gi|568163300|ref|YP_008946641.1| - 1.1e-09 38.2 0.0 1.3e-09 37.9 0.0 1.1 1 0 0 1 1 1 1 Protein-tyrosine phosphatase PTPlike_phytase PF14566.6 gi|568163300|ref|YP_008946641.1| - 0.0011 19.0 0.0 0.0025 18.0 0.0 1.4 1 1 0 1 1 1 1 Inositol hexakisphosphate CDKN3 PF05706.12 gi|568163300|ref|YP_008946641.1| - 0.0013 18.5 0.0 0.0015 18.2 0.0 1.2 1 0 0 1 1 1 1 Cyclin-dependent kinase inhibitor 3 (CDKN3) Y_phosphatase3 PF13350.6 gi|568163300|ref|YP_008946641.1| - 0.0045 17.0 0.0 0.01 15.8 0.0 1.5 1 1 1 2 2 2 1 Tyrosine phosphatase family ATPase PF06745.13 gi|568163301|ref|YP_008946642.1| - 2.4e-57 194.0 0.1 2.8e-57 193.7 0.1 1.1 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.6 gi|568163301|ref|YP_008946642.1| - 1.5e-09 37.7 0.0 2.3e-09 37.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain Rad51 PF08423.11 gi|568163301|ref|YP_008946642.1| - 1.1e-07 31.4 0.0 1.7e-07 30.8 0.0 1.3 1 0 0 1 1 1 1 Rad51 RecA PF00154.21 gi|568163301|ref|YP_008946642.1| - 3.1e-07 30.1 0.1 5.7e-07 29.3 0.0 1.4 2 0 0 2 2 2 1 recA bacterial DNA recombination protein GvpD PF07088.11 gi|568163301|ref|YP_008946642.1| - 1.2e-06 27.5 0.1 2.7e-06 26.3 0.1 1.7 1 1 1 2 2 2 1 GvpD gas vesicle protein DnaB_C PF03796.15 gi|568163301|ref|YP_008946642.1| - 3.6e-05 23.2 0.0 0.00011 21.7 0.0 2.0 1 1 0 1 1 1 1 DnaB-like helicase C terminal domain AAA_24 PF13479.6 gi|568163301|ref|YP_008946642.1| - 6.9e-05 22.6 0.2 0.00021 21.1 0.0 1.9 2 0 0 2 2 2 1 AAA domain MEDS PF14417.6 gi|568163301|ref|YP_008946642.1| - 0.00027 20.8 0.0 0.00042 20.2 0.0 1.4 1 0 0 1 1 1 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain IstB_IS21 PF01695.17 gi|568163301|ref|YP_008946642.1| - 0.00088 19.1 0.0 0.0018 18.0 0.0 1.6 1 1 1 2 2 2 1 IstB-like ATP binding protein AAA_14 PF13173.6 gi|568163301|ref|YP_008946642.1| - 0.0022 18.0 0.0 0.037 14.1 0.0 2.3 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|568163301|ref|YP_008946642.1| - 0.0036 17.6 0.0 0.0074 16.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_35 PF14516.6 gi|568163301|ref|YP_008946642.1| - 0.0082 15.0 0.0 0.011 14.6 0.0 1.1 1 0 0 1 1 1 1 AAA-like domain Rsbr_N PF08678.10 gi|568163301|ref|YP_008946642.1| - 0.023 14.8 0.2 4.6 7.3 0.0 2.8 2 0 0 2 2 2 0 Rsbr N terminal PAXNEB PF05625.11 gi|568163301|ref|YP_008946642.1| - 0.033 13.3 0.0 0.079 12.1 0.0 1.6 1 0 0 1 1 1 0 PAXNEB protein NTPase_1 PF03266.15 gi|568163301|ref|YP_008946642.1| - 0.07 13.0 0.2 0.21 11.5 0.1 2.0 1 1 0 2 2 2 0 NTPase AAA PF00004.29 gi|568163301|ref|YP_008946642.1| - 0.095 13.1 0.1 0.26 11.7 0.1 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 gi|568163301|ref|YP_008946642.1| - 0.097 12.6 0.5 0.31 10.9 0.5 2.1 1 1 0 1 1 1 0 NACHT domain AAA_19 PF13245.6 gi|568163301|ref|YP_008946642.1| - 0.11 12.8 0.3 0.28 11.5 0.3 1.7 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|568163301|ref|YP_008946642.1| - 0.11 12.9 0.0 0.51 10.8 0.0 2.0 2 1 0 2 2 2 0 RNA helicase Sigma54_activat PF00158.26 gi|568163301|ref|YP_008946642.1| - 0.13 12.0 0.0 0.23 11.1 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain QRPTase_C PF01729.19 gi|568163302|ref|YP_008946643.1| - 9e-65 217.6 0.4 1.1e-64 217.2 0.4 1.1 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.16 gi|568163302|ref|YP_008946643.1| - 3.3e-19 68.7 0.0 1.9e-18 66.3 0.0 2.1 2 0 0 2 2 2 1 Quinolinate phosphoribosyl transferase, N-terminal domain NanE PF04131.14 gi|568163302|ref|YP_008946643.1| - 0.02 14.1 0.3 0.053 12.7 0.3 1.6 1 1 0 1 1 1 0 Putative N-acetylmannosamine-6-phosphate epimerase Methyltransf_30 PF05430.11 gi|568163302|ref|YP_008946643.1| - 0.039 13.8 0.0 0.082 12.8 0.0 1.5 1 0 0 1 1 1 0 S-adenosyl-L-methionine-dependent methyltransferase CCDC73 PF15818.5 gi|568163302|ref|YP_008946643.1| - 0.047 11.5 0.1 0.063 11.1 0.1 1.1 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 73 family TMP-TENI PF02581.17 gi|568163302|ref|YP_008946643.1| - 0.082 12.2 0.1 0.98 8.7 0.1 2.2 1 1 0 1 1 1 0 Thiamine monophosphate synthase GATase PF00117.28 gi|568163303|ref|YP_008946644.1| - 1.8e-35 122.5 0.0 2.2e-35 122.2 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|568163303|ref|YP_008946644.1| - 4.1e-10 39.8 0.2 2.6e-09 37.2 0.1 2.2 2 1 0 2 2 2 1 Peptidase C26 SNO PF01174.19 gi|568163303|ref|YP_008946644.1| - 9.3e-06 25.6 0.1 0.039 13.8 0.0 2.1 2 0 0 2 2 2 2 SNO glutamine amidotransferase family FAD_binding_2 PF00890.24 gi|568163304|ref|YP_008946645.1| - 3.7e-74 250.3 0.0 4.5e-74 250.0 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 gi|568163304|ref|YP_008946645.1| - 2.1e-08 33.8 0.6 0.00024 20.5 0.4 2.8 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|568163304|ref|YP_008946645.1| - 3e-08 33.6 0.2 6.7e-06 25.9 0.2 2.4 1 1 0 1 1 1 1 FAD dependent oxidoreductase GIDA PF01134.22 gi|568163304|ref|YP_008946645.1| - 2.8e-06 26.7 0.3 0.039 13.0 0.0 2.2 2 0 0 2 2 2 2 Glucose inhibited division protein A Succ_DH_flav_C PF02910.20 gi|568163304|ref|YP_008946645.1| - 6e-06 26.3 0.0 0.00094 19.2 0.0 2.3 1 1 1 2 2 2 1 Fumarate reductase flavoprotein C-term HI0933_like PF03486.14 gi|568163304|ref|YP_008946645.1| - 0.0015 17.3 1.0 0.022 13.5 0.2 2.7 2 1 0 2 2 2 1 HI0933-like protein NAD_binding_8 PF13450.6 gi|568163304|ref|YP_008946645.1| - 0.0049 17.1 0.5 0.012 15.8 0.5 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DUF481 PF04338.12 gi|568163304|ref|YP_008946645.1| - 0.02 14.9 0.1 0.035 14.1 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function, DUF481 ApbA PF02558.16 gi|568163304|ref|YP_008946645.1| - 0.039 13.6 0.1 0.083 12.5 0.1 1.6 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA FAD_binding_3 PF01494.19 gi|568163304|ref|YP_008946645.1| - 0.092 12.0 0.7 0.15 11.3 0.7 1.3 1 0 0 1 1 1 0 FAD binding domain Pyr_redox PF00070.27 gi|568163304|ref|YP_008946645.1| - 0.11 13.0 0.3 0.43 11.2 0.1 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase NUDIX PF00293.28 gi|568163305|ref|YP_008946646.1| - 1.6e-15 57.3 0.1 2.1e-15 56.9 0.1 1.1 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 gi|568163305|ref|YP_008946646.1| - 0.0009 19.2 0.1 0.002 18.1 0.1 1.7 1 1 0 1 1 1 1 NUDIX domain TIP49 PF06068.13 gi|568163306|ref|YP_008946647.1| - 7.6e-138 459.5 4.2 1.1e-137 459.0 4.2 1.2 1 0 0 1 1 1 1 TIP49 P-loop domain TIP49_C PF17856.1 gi|568163306|ref|YP_008946647.1| - 3.5e-23 81.5 2.4 1.9e-22 79.1 0.6 2.8 3 0 0 3 3 3 1 TIP49 AAA-lid domain AAA PF00004.29 gi|568163306|ref|YP_008946647.1| - 7.9e-11 42.5 2.5 4.1e-08 33.7 0.1 2.7 3 0 0 3 3 2 2 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|568163306|ref|YP_008946647.1| - 2.1e-08 34.1 1.0 4.7e-07 29.7 0.1 2.8 3 1 0 3 3 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 gi|568163306|ref|YP_008946647.1| - 3.5e-08 33.8 0.3 0.0088 16.3 0.1 2.3 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.6 gi|568163306|ref|YP_008946647.1| - 4.9e-06 27.0 0.5 9.5e-05 22.8 0.5 2.3 1 1 0 1 1 1 1 AAA ATPase domain AAA_7 PF12775.7 gi|568163306|ref|YP_008946647.1| - 8.5e-05 22.1 0.3 0.0038 16.8 0.0 2.2 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_5 PF07728.14 gi|568163306|ref|YP_008946647.1| - 9.6e-05 22.4 0.2 0.0035 17.3 0.0 2.5 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 gi|568163306|ref|YP_008946647.1| - 0.00014 21.3 0.5 0.001 18.5 0.1 2.1 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 gi|568163306|ref|YP_008946647.1| - 0.00065 19.5 0.0 0.0014 18.4 0.0 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein Sigma54_activat PF00158.26 gi|568163306|ref|YP_008946647.1| - 0.0008 19.2 0.1 0.007 16.1 0.0 2.2 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_2 PF07724.14 gi|568163306|ref|YP_008946647.1| - 0.00083 19.5 0.2 0.0031 17.7 0.0 2.0 2 0 0 2 2 1 1 AAA domain (Cdc48 subfamily) DnaB_C PF03796.15 gi|568163306|ref|YP_008946647.1| - 0.001 18.5 0.2 0.0027 17.1 0.0 1.8 2 1 0 2 2 2 1 DnaB-like helicase C terminal domain DNA_pol3_delta2 PF13177.6 gi|568163306|ref|YP_008946647.1| - 0.0012 18.6 0.0 0.41 10.4 0.0 3.1 2 1 0 2 2 2 1 DNA polymerase III, delta subunit AAA_33 PF13671.6 gi|568163306|ref|YP_008946647.1| - 0.0025 18.0 0.0 0.0051 17.0 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|568163306|ref|YP_008946647.1| - 0.0035 17.9 0.5 0.011 16.2 0.0 2.3 3 1 0 3 3 1 1 AAA domain AAA_25 PF13481.6 gi|568163306|ref|YP_008946647.1| - 0.0042 16.7 0.6 0.016 14.8 0.3 2.2 2 1 0 2 2 2 1 AAA domain AAA_19 PF13245.6 gi|568163306|ref|YP_008946647.1| - 0.0072 16.7 3.5 0.43 10.9 3.5 2.5 1 1 0 1 1 1 1 AAA domain PhoH PF02562.16 gi|568163306|ref|YP_008946647.1| - 0.008 15.7 0.2 0.018 14.5 0.2 1.6 1 0 0 1 1 1 1 PhoH-like protein AAA_28 PF13521.6 gi|568163306|ref|YP_008946647.1| - 0.013 15.8 0.4 0.039 14.2 0.1 2.0 2 1 0 2 2 2 0 AAA domain Rad17 PF03215.15 gi|568163306|ref|YP_008946647.1| - 0.015 15.2 0.0 0.032 14.2 0.0 1.5 1 0 0 1 1 1 0 Rad17 P-loop domain RNA_helicase PF00910.22 gi|568163306|ref|YP_008946647.1| - 0.019 15.4 0.0 0.037 14.4 0.0 1.5 1 0 0 1 1 1 0 RNA helicase ResIII PF04851.15 gi|568163306|ref|YP_008946647.1| - 0.025 14.6 0.5 0.86 9.6 0.1 2.4 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit Parvo_NS1 PF01057.17 gi|568163306|ref|YP_008946647.1| - 0.033 13.3 0.0 0.054 12.6 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 AAA_17 PF13207.6 gi|568163306|ref|YP_008946647.1| - 0.034 14.6 0.5 0.18 12.3 0.1 2.4 2 0 0 2 2 2 0 AAA domain AAA_11 PF13086.6 gi|568163306|ref|YP_008946647.1| - 0.046 13.5 0.1 0.098 12.4 0.1 1.6 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|568163306|ref|YP_008946647.1| - 0.047 13.6 0.0 0.11 12.5 0.0 1.6 1 0 0 1 1 1 0 NACHT domain ABC_tran PF00005.27 gi|568163306|ref|YP_008946647.1| - 0.062 13.8 0.0 0.16 12.4 0.0 1.7 1 0 0 1 1 1 0 ABC transporter DUF2075 PF09848.9 gi|568163306|ref|YP_008946647.1| - 0.08 12.2 0.0 0.13 11.5 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) TsaE PF02367.17 gi|568163306|ref|YP_008946647.1| - 0.1 12.6 0.1 0.29 11.2 0.1 1.8 2 0 0 2 2 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE PfkB PF00294.24 gi|568163307|ref|YP_008946648.1| - 2.1e-34 119.2 0.0 1.1e-31 110.3 0.0 2.2 1 1 0 1 1 1 1 pfkB family carbohydrate kinase IMS PF00817.20 gi|568163308|ref|YP_008946649.1| - 5.5e-43 146.5 0.1 1.1e-42 145.5 0.1 1.5 1 0 0 1 1 1 1 impB/mucB/samB family IMS_HHH PF11798.8 gi|568163308|ref|YP_008946649.1| - 2.1e-09 37.1 0.0 6.6e-09 35.6 0.0 1.9 1 0 0 1 1 1 1 IMS family HHH motif HHH_5 PF14520.6 gi|568163308|ref|YP_008946649.1| - 1.1e-05 26.0 0.8 3.3e-05 24.4 0.1 2.1 2 0 0 2 2 2 1 Helix-hairpin-helix domain Cdd1 PF11731.8 gi|568163308|ref|YP_008946649.1| - 0.0021 18.3 0.0 0.0043 17.2 0.0 1.5 1 0 0 1 1 1 1 Pathogenicity locus DUF1805 PF08827.11 gi|568163308|ref|YP_008946649.1| - 0.003 17.8 0.9 0.12 12.7 0.2 3.0 3 0 0 3 3 3 1 Domain of unknown function (DUF1805) BAF PF02961.14 gi|568163308|ref|YP_008946649.1| - 0.0035 17.7 0.0 0.015 15.7 0.0 2.0 2 0 0 2 2 2 1 Barrier to autointegration factor IMS_C PF11799.8 gi|568163308|ref|YP_008946649.1| - 0.008 16.9 1.4 0.21 12.3 1.4 2.6 1 1 0 1 1 1 1 impB/mucB/samB family C-terminal domain DNA_pol_lambd_f PF10391.9 gi|568163308|ref|YP_008946649.1| - 0.1 12.4 0.0 0.25 11.2 0.0 1.6 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda SRI PF08236.11 gi|568163308|ref|YP_008946649.1| - 0.12 12.6 2.5 0.55 10.5 0.4 2.6 2 1 0 2 2 2 0 SRI (Set2 Rpb1 interacting) domain DUF4217 PF13959.6 gi|568163309|ref|YP_008946650.1| - 0.0035 17.6 0.0 0.006 16.8 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4217) Glyoxalase PF00903.25 gi|568163309|ref|YP_008946650.1| - 0.13 12.5 0.0 0.15 12.3 0.0 1.2 1 0 0 1 1 1 0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RTC PF01137.21 gi|568163310|ref|YP_008946651.1| - 9.1e-77 257.2 0.0 1e-76 257.0 0.0 1.0 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase RTC_insert PF05189.13 gi|568163310|ref|YP_008946651.1| - 7e-21 74.7 0.2 1.2e-20 73.9 0.2 1.4 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase (RTC), insert domain ADH_N PF08240.12 gi|568163311|ref|YP_008946652.1| - 2.8e-26 91.5 0.8 4.2e-26 91.0 0.8 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|568163311|ref|YP_008946652.1| - 5.1e-16 58.8 0.0 1.3e-15 57.5 0.0 1.7 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|568163311|ref|YP_008946652.1| - 1.1e-10 42.7 0.0 1.9e-10 41.9 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 gi|568163311|ref|YP_008946652.1| - 0.0017 17.7 0.0 0.0028 17.0 0.0 1.2 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_7 PF13241.6 gi|568163311|ref|YP_008946652.1| - 0.0064 16.9 0.0 0.0096 16.3 0.0 1.4 1 0 0 1 1 1 1 Putative NAD(P)-binding ApbA PF02558.16 gi|568163311|ref|YP_008946652.1| - 0.019 14.6 0.0 0.035 13.8 0.0 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Glu_dehyd_C PF16912.5 gi|568163311|ref|YP_008946652.1| - 0.022 14.2 0.0 0.039 13.4 0.0 1.3 1 0 0 1 1 1 0 Glucose dehydrogenase C-terminus Sacchrp_dh_NADP PF03435.18 gi|568163311|ref|YP_008946652.1| - 0.053 13.8 0.0 0.094 13.0 0.0 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Gln-synt_C PF00120.24 gi|568163312|ref|YP_008946653.1| - 7.8e-72 242.1 0.0 2.6e-71 240.4 0.0 1.7 1 1 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N_2 PF16952.5 gi|568163312|ref|YP_008946653.1| - 0.00011 22.0 0.0 0.00019 21.2 0.0 1.4 1 0 0 1 1 1 1 Glutamine synthetase N-terminal domain Gln-synt_N PF03951.19 gi|568163312|ref|YP_008946653.1| - 0.014 15.1 0.0 0.91 9.3 0.0 3.2 3 1 0 3 3 3 0 Glutamine synthetase, beta-Grasp domain RNA12 PF10443.9 gi|568163312|ref|YP_008946653.1| - 0.14 10.9 0.1 0.21 10.3 0.1 1.1 1 0 0 1 1 1 0 RNA12 protein Met_10 PF02475.16 gi|568163313|ref|YP_008946654.1| - 1.6e-46 158.6 0.0 2.3e-46 158.0 0.0 1.1 1 0 0 1 1 1 1 Met-10+ like-protein Fibrillarin PF01269.17 gi|568163313|ref|YP_008946654.1| - 0.011 14.9 0.0 0.018 14.2 0.0 1.4 1 0 0 1 1 1 0 Fibrillarin PrmA PF06325.13 gi|568163313|ref|YP_008946654.1| - 0.019 14.4 0.0 0.028 13.8 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) DUF4112 PF13430.6 gi|568163313|ref|YP_008946654.1| - 0.089 13.1 0.1 0.17 12.1 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4112) Chal_sti_synt_N PF00195.19 gi|568163314|ref|YP_008946655.1| - 0.039 13.4 0.0 0.062 12.7 0.0 1.2 1 0 0 1 1 1 0 Chalcone and stilbene synthases, N-terminal domain Amidohydro_3 PF07969.11 gi|568163314|ref|YP_008946655.1| - 0.19 11.1 0.0 1 8.8 0.0 1.9 2 0 0 2 2 2 0 Amidohydrolase family Peptidase_M54 PF07998.11 gi|568163315|ref|YP_008946656.1| - 6.1e-37 127.5 0.8 8e-37 127.1 0.8 1.1 1 0 0 1 1 1 1 Peptidase family M54 Peptidase_M10 PF00413.24 gi|568163315|ref|YP_008946656.1| - 0.0002 21.3 0.0 0.00021 21.2 0.0 1.3 1 0 0 1 1 1 1 Matrixin Peptidase_M43 PF05572.13 gi|568163315|ref|YP_008946656.1| - 0.00047 20.1 0.7 0.0011 18.9 0.2 1.8 2 0 0 2 2 2 1 Pregnancy-associated plasma protein-A Reprolysin_3 PF13582.6 gi|568163315|ref|YP_008946656.1| - 0.0021 18.5 0.0 0.0027 18.2 0.0 1.2 1 0 0 1 1 1 1 Metallo-peptidase family M12B Reprolysin-like Metallopep PF12044.8 gi|568163315|ref|YP_008946656.1| - 0.0069 15.0 0.0 0.0089 14.7 0.0 1.1 1 0 0 1 1 1 1 Putative peptidase family Reprolysin_5 PF13688.6 gi|568163315|ref|YP_008946656.1| - 0.0076 16.4 0.1 0.0076 16.4 0.1 1.3 1 1 0 1 1 1 1 Metallo-peptidase family M12 Reprolysin_4 PF13583.6 gi|568163315|ref|YP_008946656.1| - 0.022 14.4 0.0 0.03 14.0 0.0 1.3 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like Peptidase_M66 PF10462.9 gi|568163315|ref|YP_008946656.1| - 0.023 13.7 0.0 0.033 13.1 0.0 1.2 1 0 0 1 1 1 0 Peptidase M66 DUF4953 PF16313.5 gi|568163315|ref|YP_008946656.1| - 0.039 13.2 0.0 0.05 12.8 0.0 1.2 1 0 0 1 1 1 0 Met-zincin Peptidase_M57 PF12388.8 gi|568163315|ref|YP_008946656.1| - 0.067 12.8 0.1 0.1 12.2 0.1 1.3 1 0 0 1 1 1 0 Dual-action HEIGH metallo-peptidase Reprolysin PF01421.19 gi|568163315|ref|YP_008946656.1| - 0.068 13.1 2.0 0.17 11.8 0.1 2.0 2 0 0 2 2 2 0 Reprolysin (M12B) family zinc metalloprotease Archease PF01951.16 gi|568163316|ref|YP_008946657.1| - 1.1e-42 145.6 0.6 1.2e-42 145.4 0.6 1.0 1 0 0 1 1 1 1 Archease protein family (MTH1598/TM1083) Ycf70 PF17382.2 gi|568163317|ref|YP_008946658.1| - 0.074 13.5 0.6 0.088 13.2 0.4 1.3 1 1 0 1 1 1 0 Uncharacterized Ycf70-like Insulin_TMD PF17870.1 gi|568163318|ref|YP_008946659.1| - 0.19 11.8 6.8 0.26 11.4 4.3 2.7 2 0 0 2 2 2 0 Insulin receptor trans-membrane segment SLATT_fungal PF18142.1 gi|568163318|ref|YP_008946659.1| - 0.31 11.0 2.2 0.63 10.0 2.2 1.5 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain BTP PF05232.12 gi|568163319|ref|YP_008946660.1| - 2.5 8.2 6.7 4.7 7.3 2.1 2.1 2 0 0 2 2 2 0 Chlorhexidine efflux transporter Cytidylate_kin2 PF13189.6 gi|568163320|ref|YP_008946661.1| - 9e-21 74.8 0.4 1.3e-19 71.0 0.4 2.0 1 1 0 1 1 1 1 Cytidylate kinase-like family AAA_18 PF13238.6 gi|568163320|ref|YP_008946661.1| - 5.5e-18 65.8 0.1 6.9e-18 65.4 0.1 1.1 1 0 0 1 1 1 1 AAA domain Cytidylate_kin PF02224.18 gi|568163320|ref|YP_008946661.1| - 1.1e-14 54.6 0.1 4.2e-09 36.5 0.1 2.0 1 1 1 2 2 2 2 Cytidylate kinase AAA_17 PF13207.6 gi|568163320|ref|YP_008946661.1| - 5.4e-11 43.1 0.0 1e-10 42.1 0.0 1.5 1 1 0 1 1 1 1 AAA domain dNK PF01712.19 gi|568163320|ref|YP_008946661.1| - 4.9e-06 26.5 0.4 0.065 13.1 0.0 2.2 1 1 0 2 2 2 2 Deoxynucleoside kinase SKI PF01202.22 gi|568163320|ref|YP_008946661.1| - 3.5e-05 24.0 0.5 7.9e-05 22.8 0.5 1.6 1 1 0 1 1 1 1 Shikimate kinase AAA_15 PF13175.6 gi|568163320|ref|YP_008946661.1| - 0.00011 22.0 0.4 0.00012 21.9 0.4 1.1 1 0 0 1 1 1 1 AAA ATPase domain ADK PF00406.22 gi|568163320|ref|YP_008946661.1| - 0.0003 20.9 0.0 0.0011 19.1 0.0 1.9 2 0 0 2 2 2 1 Adenylate kinase AAA PF00004.29 gi|568163320|ref|YP_008946661.1| - 0.00085 19.8 0.1 0.0015 19.0 0.1 1.6 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 gi|568163320|ref|YP_008946661.1| - 0.00089 19.4 0.0 0.062 13.5 0.0 2.1 2 0 0 2 2 2 1 AAA domain PRK PF00485.18 gi|568163320|ref|YP_008946661.1| - 0.0013 18.5 0.5 0.21 11.3 0.0 2.2 1 1 1 2 2 2 1 Phosphoribulokinase / Uridine kinase family CoaE PF01121.20 gi|568163320|ref|YP_008946661.1| - 0.0016 18.1 0.0 0.4 10.3 0.0 2.2 2 0 0 2 2 2 1 Dephospho-CoA kinase Rad17 PF03215.15 gi|568163320|ref|YP_008946661.1| - 0.0023 17.9 0.0 0.0032 17.4 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain RNA_helicase PF00910.22 gi|568163320|ref|YP_008946661.1| - 0.0065 16.8 0.1 0.012 16.0 0.1 1.5 1 1 0 1 1 1 1 RNA helicase RuvB_N PF05496.12 gi|568163320|ref|YP_008946661.1| - 0.0069 16.1 0.2 0.019 14.7 0.1 1.8 1 1 1 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_28 PF13521.6 gi|568163320|ref|YP_008946661.1| - 0.0095 16.2 0.0 0.02 15.1 0.0 1.6 2 0 0 2 2 2 1 AAA domain Thymidylate_kin PF02223.17 gi|568163320|ref|YP_008946661.1| - 0.011 15.4 0.3 2 8.0 0.1 2.4 1 1 0 2 2 2 0 Thymidylate kinase KTI12 PF08433.10 gi|568163320|ref|YP_008946661.1| - 0.015 14.8 0.0 0.02 14.4 0.0 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 NTPase_1 PF03266.15 gi|568163320|ref|YP_008946661.1| - 0.017 15.0 0.0 0.046 13.6 0.0 1.7 1 1 0 1 1 1 0 NTPase AAA_22 PF13401.6 gi|568163320|ref|YP_008946661.1| - 0.018 15.3 0.0 0.037 14.3 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_5 PF07728.14 gi|568163320|ref|YP_008946661.1| - 0.021 14.8 0.0 0.036 14.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Zeta_toxin PF06414.12 gi|568163320|ref|YP_008946661.1| - 0.024 13.9 0.0 0.049 12.9 0.0 1.6 2 0 0 2 2 2 0 Zeta toxin AAA_16 PF13191.6 gi|568163320|ref|YP_008946661.1| - 0.031 14.6 0.1 0.036 14.5 0.1 1.4 1 1 0 1 1 1 0 AAA ATPase domain ABC_tran PF00005.27 gi|568163320|ref|YP_008946661.1| - 0.039 14.5 0.4 0.04 14.4 0.4 1.4 1 1 0 1 1 1 0 ABC transporter UPF0160 PF03690.13 gi|568163320|ref|YP_008946661.1| - 0.066 12.9 0.1 0.071 12.7 0.1 1.1 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0160) AAA_24 PF13479.6 gi|568163320|ref|YP_008946661.1| - 0.068 12.9 0.0 0.083 12.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain APS_kinase PF01583.20 gi|568163320|ref|YP_008946661.1| - 0.072 13.0 0.0 0.15 12.0 0.0 1.6 2 0 0 2 2 2 0 Adenylylsulphate kinase Mg_chelatase PF01078.21 gi|568163320|ref|YP_008946661.1| - 0.073 12.4 0.1 0.13 11.6 0.1 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Ribosomal_L34e PF01199.18 gi|568163321|ref|YP_008946662.1| - 6.1e-20 71.3 2.9 7.2e-20 71.1 2.9 1.0 1 0 0 1 1 1 1 Ribosomal protein L34e Zn_ribbon_SprT PF17283.2 gi|568163321|ref|YP_008946662.1| - 0.0038 17.1 3.1 0.22 11.5 0.2 2.2 2 0 0 2 2 2 2 SprT-like zinc ribbon domain zf-P11 PF03854.14 gi|568163321|ref|YP_008946662.1| - 0.012 15.3 1.5 3 7.6 0.1 2.2 2 0 0 2 2 2 0 P-11 zinc finger Gin PF10764.9 gi|568163321|ref|YP_008946662.1| - 0.013 15.4 0.7 0.043 13.8 0.0 1.9 2 0 0 2 2 2 0 Inhibitor of sigma-G Gin zinc_ribbon_12 PF11331.8 gi|568163321|ref|YP_008946662.1| - 0.26 11.1 2.4 3.4 7.5 0.1 2.2 2 0 0 2 2 2 0 Probable zinc-ribbon domain Synaptobrevin PF00957.21 gi|568163322|ref|YP_008946663.1| - 0.00068 19.4 0.1 0.00068 19.4 0.1 2.2 3 0 0 3 3 3 1 Synaptobrevin SPC12 PF06645.13 gi|568163322|ref|YP_008946663.1| - 0.0029 17.6 2.1 0.0029 17.6 2.1 2.8 3 0 0 3 3 3 1 Microsomal signal peptidase 12 kDa subunit (SPC12) DUF2207 PF09972.9 gi|568163322|ref|YP_008946663.1| - 0.55 8.9 3.7 0.17 10.7 0.6 1.5 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) AAA_17 PF13207.6 gi|568163323|ref|YP_008946664.1| - 2.9e-34 118.4 0.0 3.8e-34 118.0 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|568163323|ref|YP_008946664.1| - 9.1e-07 29.5 0.0 1.2e-06 29.1 0.0 1.2 1 0 0 1 1 1 1 AAA domain Thymidylate_kin PF02223.17 gi|568163323|ref|YP_008946664.1| - 4.6e-05 23.2 0.1 0.26 10.9 0.0 2.8 2 1 0 3 3 3 2 Thymidylate kinase AAA_22 PF13401.6 gi|568163323|ref|YP_008946664.1| - 0.00033 20.9 0.0 0.00046 20.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 gi|568163323|ref|YP_008946664.1| - 0.00078 19.4 0.2 0.0015 18.5 0.2 1.4 1 0 0 1 1 1 1 NTPase AAA_30 PF13604.6 gi|568163323|ref|YP_008946664.1| - 0.0015 18.3 0.1 0.0059 16.3 0.0 1.9 2 0 0 2 2 2 1 AAA domain SRP54 PF00448.22 gi|568163323|ref|YP_008946664.1| - 0.0019 17.9 0.1 0.0028 17.3 0.1 1.3 1 1 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_16 PF13191.6 gi|568163323|ref|YP_008946664.1| - 0.0049 17.3 0.0 0.0055 17.1 0.0 1.3 1 1 0 1 1 1 1 AAA ATPase domain MeaB PF03308.16 gi|568163323|ref|YP_008946664.1| - 0.0051 15.8 0.0 0.0077 15.2 0.0 1.4 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB KTI12 PF08433.10 gi|568163323|ref|YP_008946664.1| - 0.0062 16.0 0.0 0.0087 15.5 0.0 1.2 1 0 0 1 1 1 1 Chromatin associated protein KTI12 ATP_bind_1 PF03029.17 gi|568163323|ref|YP_008946664.1| - 0.011 15.5 0.0 0.015 15.1 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein AAA_14 PF13173.6 gi|568163323|ref|YP_008946664.1| - 0.02 14.9 0.2 0.048 13.7 0.2 1.6 1 1 0 1 1 1 0 AAA domain DUF2075 PF09848.9 gi|568163323|ref|YP_008946664.1| - 0.057 12.7 0.1 0.079 12.2 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_28 PF13521.6 gi|568163323|ref|YP_008946664.1| - 0.1 12.9 0.0 0.25 11.6 0.0 1.6 2 0 0 2 2 2 0 AAA domain Viral_helicase1 PF01443.18 gi|568163323|ref|YP_008946664.1| - 0.13 12.0 0.0 0.18 11.5 0.0 1.4 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase SecY PF00344.20 gi|568163324|ref|YP_008946665.1| - 1.5e-56 191.9 32.4 2e-56 191.5 32.4 1.2 1 0 0 1 1 1 1 SecY translocase Plug_translocon PF10559.9 gi|568163324|ref|YP_008946665.1| - 8e-09 35.2 2.4 8e-09 35.2 2.4 2.9 3 0 0 3 3 3 1 Plug domain of Sec61p Ribosomal_L27A PF00828.19 gi|568163325|ref|YP_008946666.1| - 2.9e-16 60.3 4.1 5.1e-16 59.5 4.1 1.5 1 1 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A RSRP PF17069.5 gi|568163325|ref|YP_008946666.1| - 0.11 12.1 0.0 0.15 11.7 0.0 1.2 1 0 0 1 1 1 0 Arginine/Serine-Rich protein 1 Ribosomal_L30 PF00327.20 gi|568163326|ref|YP_008946667.1| - 3.7e-12 45.9 0.0 7.3e-11 41.8 0.0 2.2 2 0 0 2 2 2 1 Ribosomal protein L30p/L7e DUF4368 PF14287.6 gi|568163326|ref|YP_008946667.1| - 0.0037 17.5 0.1 0.0098 16.2 0.0 1.8 2 1 0 2 2 2 1 Domain of unknown function (DUF4368) DUF1421 PF07223.11 gi|568163326|ref|YP_008946667.1| - 0.013 15.4 0.4 0.12 12.2 0.1 2.4 3 0 0 3 3 3 0 UBA-like domain (DUF1421) Ribosomal_S5 PF00333.20 gi|568163327|ref|YP_008946668.1| - 4.2e-20 71.5 0.2 7.8e-20 70.6 0.2 1.5 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.15 gi|568163327|ref|YP_008946668.1| - 8.9e-19 66.7 0.1 3.2e-18 64.9 0.0 1.8 2 0 0 2 2 2 1 Ribosomal protein S5, C-terminal domain Hs1pro-1_N PF07231.12 gi|568163327|ref|YP_008946668.1| - 0.018 14.8 0.0 0.029 14.1 0.0 1.3 1 0 0 1 1 1 0 Hs1pro-1 N-terminus Ribosomal_L5e PF17144.4 gi|568163328|ref|YP_008946669.1| - 2.3e-24 86.2 5.4 9.6e-18 64.7 2.2 2.4 1 1 1 2 2 2 2 Ribosomal large subunit proteins 60S L5, and 50S L18 Ribosomal_L18_c PF14204.6 gi|568163328|ref|YP_008946669.1| - 1.1e-09 39.1 0.0 1.8e-09 38.4 0.0 1.3 1 0 0 1 1 1 1 Ribosomal L18 C-terminal region Ribosomal_L19e PF01280.20 gi|568163329|ref|YP_008946670.1| - 1.1e-48 164.9 11.6 1.3e-48 164.8 11.6 1.0 1 0 0 1 1 1 1 Ribosomal protein L19e Ribosomal_L32e PF01655.18 gi|568163330|ref|YP_008946671.1| - 5.9e-36 123.2 0.0 8.6e-36 122.7 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L32 Ribosomal_L6 PF00347.23 gi|568163331|ref|YP_008946672.1| - 3e-29 101.5 8.5 2.4e-14 53.7 0.9 2.1 2 0 0 2 2 2 2 Ribosomal protein L6 PAP_fibrillin PF04755.12 gi|568163331|ref|YP_008946672.1| - 0.024 14.6 0.2 0.26 11.2 0.0 2.1 1 1 1 2 2 2 0 PAP_fibrillin Adeno_52K PF03052.15 gi|568163331|ref|YP_008946672.1| - 0.08 12.4 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Adenoviral protein L1 52/55-kDa TubC_N PF18563.1 gi|568163331|ref|YP_008946672.1| - 0.12 12.4 0.7 1.3 9.0 0.0 2.5 2 1 1 3 3 3 0 TubC N-terminal docking domain ETRAMP PF09716.10 gi|568163331|ref|YP_008946672.1| - 0.13 12.3 0.2 0.26 11.3 0.2 1.6 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) CooT PF10133.9 gi|568163331|ref|YP_008946672.1| - 0.29 11.5 2.4 8 6.8 0.3 2.9 2 2 2 4 4 4 0 CO dehydrogenase accessory protein CooT KH_1 PF00013.29 gi|568163331|ref|YP_008946672.1| - 0.37 10.6 4.1 3.9 7.4 0.2 2.5 2 1 0 2 2 2 0 KH domain Ribosomal_S8 PF00410.19 gi|568163332|ref|YP_008946673.1| - 6.1e-23 81.1 0.1 1e-22 80.4 0.1 1.4 1 1 0 1 1 1 1 Ribosomal protein S8 Ribosomal_S14 PF00253.21 gi|568163333|ref|YP_008946674.1| - 3.1e-10 39.6 3.9 3.4e-10 39.5 3.9 1.0 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e zf-HYPF PF07503.12 gi|568163333|ref|YP_008946674.1| - 0.00019 21.1 0.5 0.027 14.2 0.0 2.1 2 0 0 2 2 2 2 HypF finger Zn_Tnp_IS1595 PF12760.7 gi|568163333|ref|YP_008946674.1| - 0.0087 16.0 1.8 0.012 15.6 1.8 1.2 1 0 0 1 1 1 1 Transposase zinc-ribbon domain zf-P11 PF03854.14 gi|568163333|ref|YP_008946674.1| - 0.042 13.5 1.0 0.058 13.1 1.0 1.2 1 0 0 1 1 1 0 P-11 zinc finger Ribosomal_L5_C PF00673.21 gi|568163334|ref|YP_008946675.1| - 2.1e-24 85.5 0.0 4.4e-24 84.5 0.0 1.6 2 0 0 2 2 2 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 gi|568163334|ref|YP_008946675.1| - 2.6e-19 69.3 0.1 5.9e-19 68.2 0.1 1.6 1 0 0 1 1 1 1 Ribosomal protein L5 Ribosomal_S4e PF00900.20 gi|568163335|ref|YP_008946676.1| - 1.1e-18 66.9 1.2 2.3e-18 65.8 0.2 2.1 2 0 0 2 2 2 1 Ribosomal family S4e S4 PF01479.25 gi|568163335|ref|YP_008946676.1| - 2.8e-12 46.1 0.2 5.2e-12 45.3 0.2 1.5 1 0 0 1 1 1 1 S4 domain RS4NT PF08071.12 gi|568163335|ref|YP_008946676.1| - 2.1e-05 24.5 0.2 4.3e-05 23.5 0.2 1.5 1 0 0 1 1 1 1 RS4NT (NUC023) domain S4_2 PF13275.6 gi|568163335|ref|YP_008946676.1| - 0.0016 18.2 0.0 0.0034 17.2 0.0 1.5 1 0 0 1 1 1 1 S4 domain Rad60-SLD PF11976.8 gi|568163335|ref|YP_008946676.1| - 0.0033 17.2 0.0 0.011 15.6 0.0 1.8 2 0 0 2 2 2 1 Ubiquitin-2 like Rad60 SUMO-like KOW PF00467.29 gi|568163335|ref|YP_008946676.1| - 0.057 13.4 0.0 0.17 11.8 0.0 1.9 1 0 0 1 1 1 0 KOW motif Ribosomal_L26 PF16906.5 gi|568163336|ref|YP_008946677.1| - 2.9e-30 104.5 0.6 4.3e-30 104.0 0.6 1.2 1 0 0 1 1 1 1 Ribosomal proteins L26 eukaryotic, L24P archaeal KOW PF00467.29 gi|568163336|ref|YP_008946677.1| - 3.5e-07 29.9 2.3 6.9e-07 29.0 2.3 1.5 1 0 0 1 1 1 1 KOW motif Ribosomal_L14 PF00238.19 gi|568163337|ref|YP_008946678.1| - 1.9e-36 124.8 0.1 2.2e-36 124.6 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e PAS_3 PF08447.12 gi|568163337|ref|YP_008946678.1| - 0.039 14.2 0.0 0.066 13.5 0.0 1.3 1 0 0 1 1 1 0 PAS fold Ribosomal_S17 PF00366.20 gi|568163338|ref|YP_008946679.1| - 1.3e-19 70.1 0.0 1.7e-19 69.7 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S17 Ribosomal_S17_N PF16205.5 gi|568163338|ref|YP_008946679.1| - 0.04 14.3 0.0 0.078 13.4 0.0 1.5 1 0 0 1 1 1 0 Ribosomal_S17 N-terminal UPF0086 PF01868.16 gi|568163339|ref|YP_008946680.1| - 1.9e-15 56.6 0.1 2e-15 56.5 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function UPF0086 Ribosomal_L29 PF00831.23 gi|568163340|ref|YP_008946681.1| - 1.7e-18 66.3 6.6 2.1e-18 66.0 6.6 1.1 1 0 0 1 1 1 1 Ribosomal L29 protein DUF29 PF01724.16 gi|568163340|ref|YP_008946681.1| - 0.0011 19.2 1.3 0.0013 19.0 1.3 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF29 Ribosomal_S3_C PF00189.20 gi|568163341|ref|YP_008946682.1| - 1.8e-22 79.6 1.8 1.8e-22 79.6 1.8 1.9 2 0 0 2 2 2 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.17 gi|568163341|ref|YP_008946682.1| - 2.8e-15 55.9 1.7 4.1e-15 55.4 0.0 2.1 3 0 0 3 3 3 1 KH domain KH_1 PF00013.29 gi|568163341|ref|YP_008946682.1| - 0.0057 16.5 1.2 0.04 13.7 0.2 2.5 2 0 0 2 2 2 1 KH domain Ribosomal_L22 PF00237.19 gi|568163342|ref|YP_008946683.1| - 1.6e-27 95.8 0.4 2.2e-27 95.3 0.4 1.2 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e Cytokin-bind PF09265.10 gi|568163342|ref|YP_008946683.1| - 0.046 13.1 0.1 0.082 12.3 0.0 1.4 2 0 0 2 2 2 0 Cytokinin dehydrogenase 1, FAD and cytokinin binding Ribosomal_S19 PF00203.21 gi|568163343|ref|YP_008946684.1| - 1.5e-32 111.3 1.0 1.9e-32 110.9 1.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S19 DDR PF08841.10 gi|568163343|ref|YP_008946684.1| - 0.046 12.7 0.1 0.058 12.4 0.1 1.0 1 0 0 1 1 1 0 Diol dehydratase reactivase ATPase-like domain Myb_DNA-bind_7 PF15963.5 gi|568163343|ref|YP_008946684.1| - 0.074 12.9 0.8 0.12 12.3 0.8 1.3 1 0 0 1 1 1 0 Myb DNA-binding like Ribosomal_L2_C PF03947.18 gi|568163344|ref|YP_008946685.1| - 4e-41 140.2 3.4 4.3e-41 140.0 2.3 1.5 2 0 0 2 2 2 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 gi|568163344|ref|YP_008946685.1| - 1e-12 47.8 0.1 3.6e-12 46.1 0.1 2.0 1 0 0 1 1 1 1 Ribosomal Proteins L2, RNA binding domain Ribosomal_L23 PF00276.20 gi|568163345|ref|YP_008946686.1| - 1.3e-12 47.8 10.2 1e-11 45.0 10.2 1.9 1 1 0 1 1 1 1 Ribosomal protein L23 ASL_C PF08328.11 gi|568163345|ref|YP_008946686.1| - 0.0043 17.1 0.6 0.0049 17.0 0.6 1.1 1 0 0 1 1 1 1 Adenylosuccinate lyase C-terminal Ubiquitin_4 PF18036.1 gi|568163345|ref|YP_008946686.1| - 0.022 14.8 0.7 0.034 14.2 0.5 1.3 1 1 0 1 1 1 0 Ubiquitin-like domain TusA PF01206.17 gi|568163345|ref|YP_008946686.1| - 0.038 13.8 0.8 0.049 13.5 0.7 1.4 1 1 0 1 1 1 0 Sulfurtransferase TusA Ribosomal_L4 PF00573.22 gi|568163346|ref|YP_008946687.1| - 3.6e-36 124.7 0.1 4.3e-36 124.4 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family DUF2149 PF09919.9 gi|568163346|ref|YP_008946687.1| - 0.012 15.8 0.1 0.025 14.8 0.1 1.5 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2149) DUF3913 PF13052.6 gi|568163346|ref|YP_008946687.1| - 0.14 12.4 0.2 0.32 11.3 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3913) Ribosomal_L3 PF00297.22 gi|568163347|ref|YP_008946688.1| - 3e-73 246.9 0.0 3.4e-73 246.7 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L3 XhlA PF10779.9 gi|568163347|ref|YP_008946688.1| - 0.085 13.1 0.2 0.18 12.0 0.2 1.5 1 0 0 1 1 1 0 Haemolysin XhlA Methyltrn_RNA_3 PF02598.17 gi|568163348|ref|YP_008946689.1| - 7.6e-20 71.6 0.0 2.3e-13 50.3 0.1 2.2 1 1 1 2 2 2 2 Putative RNA methyltransferase tRNA-synt_1 PF00133.22 gi|568163349|ref|YP_008946690.1| - 1.7e-182 607.9 2.0 2.4e-182 607.4 2.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|568163349|ref|YP_008946690.1| - 2.2e-28 99.1 4.5 2.7e-28 98.8 2.9 2.0 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|568163349|ref|YP_008946690.1| - 2.3e-19 69.4 9.8 1.7e-06 27.0 0.0 5.1 3 2 1 4 4 4 3 tRNA synthetases class I (M) tRNA-synt_1_2 PF13603.6 gi|568163349|ref|YP_008946690.1| - 0.0002 21.0 0.0 0.0019 17.7 0.1 2.6 2 1 0 2 2 2 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1f PF01921.18 gi|568163349|ref|YP_008946690.1| - 0.00041 19.4 0.0 0.0012 17.8 0.0 1.7 1 0 0 1 1 1 1 tRNA synthetases class I (K) PDZ_4 PF17816.1 gi|568163349|ref|YP_008946690.1| - 0.0014 19.0 0.2 0.058 13.8 0.1 3.0 1 1 1 2 2 2 1 PDZ domain NID PF07292.13 gi|568163349|ref|YP_008946690.1| - 0.01 16.4 0.4 0.01 16.4 0.4 2.0 2 0 0 2 2 2 0 Nmi/IFP 35 domain (NID) Rpr2 PF04032.16 gi|568163349|ref|YP_008946690.1| - 0.019 15.2 1.2 0.088 13.1 0.1 2.6 3 0 0 3 3 3 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Iso_dh PF00180.20 gi|568163350|ref|YP_008946691.1| - 3.9e-92 309.1 0.8 4.5e-92 308.9 0.8 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase PdxA PF04166.12 gi|568163350|ref|YP_008946691.1| - 0.015 14.7 0.1 0.038 13.4 0.0 1.7 2 0 0 2 2 2 0 Pyridoxal phosphate biosynthetic protein PdxA DUF447 PF04289.12 gi|568163351|ref|YP_008946692.1| - 3.3e-41 141.0 0.0 4e-41 140.7 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF447) HAD_2 PF13419.6 gi|568163352|ref|YP_008946693.1| - 3e-24 86.1 0.1 9.7e-24 84.4 0.1 1.7 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|568163352|ref|YP_008946693.1| - 8.2e-12 45.9 0.0 3.3e-11 43.9 0.0 1.8 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|568163352|ref|YP_008946693.1| - 4.8e-09 36.2 0.0 8.5e-09 35.4 0.0 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like HAD PF12710.7 gi|568163352|ref|YP_008946693.1| - 0.00095 19.6 0.0 0.0018 18.7 0.0 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase IFT81_CH PF18383.1 gi|568163352|ref|YP_008946693.1| - 0.023 15.0 0.3 0.058 13.7 0.2 1.7 2 0 0 2 2 2 0 Intraflagellar transport 81 calponin homology domain Hydrolase_6 PF13344.6 gi|568163352|ref|YP_008946693.1| - 0.034 14.3 0.0 0.17 12.1 0.0 2.1 3 0 0 3 3 3 0 Haloacid dehalogenase-like hydrolase DUF4159 PF13709.6 gi|568163352|ref|YP_008946693.1| - 0.084 12.3 0.0 0.13 11.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4159) GTP_EFTU PF00009.27 gi|568163353|ref|YP_008946694.1| - 1.5e-62 210.6 0.1 2.4e-62 209.9 0.1 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 gi|568163353|ref|YP_008946694.1| - 4.9e-29 100.6 0.1 4.6e-28 97.4 0.0 2.6 2 1 1 3 3 3 1 Elongation factor G, domain IV EFG_II PF14492.6 gi|568163353|ref|YP_008946694.1| - 2.9e-21 75.3 0.1 7.6e-21 74.0 0.1 1.8 1 0 0 1 1 1 1 Elongation Factor G, domain II EFG_C PF00679.24 gi|568163353|ref|YP_008946694.1| - 3.3e-21 75.1 0.0 1e-20 73.5 0.0 1.9 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 gi|568163353|ref|YP_008946694.1| - 1.1e-11 44.9 0.0 5e-11 42.8 0.0 2.2 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|568163353|ref|YP_008946694.1| - 0.00019 21.5 0.2 0.00048 20.2 0.2 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase RF3_C PF16658.5 gi|568163353|ref|YP_008946694.1| - 0.04 13.7 0.0 0.085 12.7 0.0 1.6 1 0 0 1 1 1 0 Class II release factor RF3, C-terminal domain CdiA_C PF18451.1 gi|568163353|ref|YP_008946694.1| - 0.083 13.1 3.3 0.2 11.9 3.3 1.7 1 0 0 1 1 1 0 Contact-dependent growth inhibition CdiA C-terminal domain ERCC4 PF02732.15 gi|568163354|ref|YP_008946695.1| - 2.8e-23 82.8 0.3 5.3e-23 81.9 0.3 1.5 1 0 0 1 1 1 1 ERCC4 domain HHH_2 PF12826.7 gi|568163354|ref|YP_008946695.1| - 1.1e-06 28.6 0.0 3.4e-06 27.1 0.0 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|568163354|ref|YP_008946695.1| - 1.7e-06 28.6 0.0 1.3e-05 25.7 0.0 2.3 2 0 0 2 2 2 1 Helix-hairpin-helix domain 5_3_exonuc PF01367.20 gi|568163354|ref|YP_008946695.1| - 0.00014 22.4 0.3 0.00036 21.1 0.0 1.8 2 0 0 2 2 2 1 5'-3' exonuclease, C-terminal SAM fold z-alpha PF02295.17 gi|568163354|ref|YP_008946695.1| - 0.026 14.5 0.9 38 4.4 0.0 4.0 3 1 1 4 4 4 0 Adenosine deaminase z-alpha domain Prefoldin_2 PF01920.20 gi|568163355|ref|YP_008946696.1| - 2.4e-23 82.1 17.7 2.7e-23 81.9 17.7 1.0 1 0 0 1 1 1 1 Prefoldin subunit DUF424 PF04242.13 gi|568163355|ref|YP_008946696.1| - 0.0088 16.3 0.2 0.022 15.0 0.2 1.6 1 1 1 2 2 2 1 Protein of unknown function (DUF424) DUF87 PF01935.17 gi|568163355|ref|YP_008946696.1| - 0.18 11.9 3.9 0.23 11.6 3.9 1.0 1 0 0 1 1 1 0 Helicase HerA, central domain DUF3837 PF12939.7 gi|568163355|ref|YP_008946696.1| - 0.22 11.9 4.7 2.3 8.7 0.9 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3837) RseA_C PF03873.13 gi|568163355|ref|YP_008946696.1| - 0.27 11.5 5.6 0.22 11.8 1.4 2.2 2 0 0 2 2 2 0 Anti sigma-E protein RseA, C-terminal domain TPR_MLP1_2 PF07926.12 gi|568163355|ref|YP_008946696.1| - 0.35 10.9 12.6 0.85 9.7 3.9 2.1 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein SlyX PF04102.12 gi|568163355|ref|YP_008946696.1| - 0.43 11.2 9.6 0.11 13.1 2.6 2.2 2 0 0 2 2 2 0 SlyX CDC37_C PF08564.10 gi|568163355|ref|YP_008946696.1| - 0.7 10.1 8.0 2.5 8.3 3.2 2.5 1 1 1 2 2 2 0 Cdc37 C terminal domain Prefoldin PF02996.17 gi|568163355|ref|YP_008946696.1| - 0.91 9.5 12.9 1.9e+02 2.0 12.9 2.4 1 1 0 1 1 1 0 Prefoldin subunit APG6_N PF17675.1 gi|568163355|ref|YP_008946696.1| - 1.1 9.8 12.2 0.57 10.7 1.5 2.1 2 0 0 2 2 2 0 Apg6 coiled-coil region U1snRNP70_N PF12220.8 gi|568163355|ref|YP_008946696.1| - 1.5 9.5 6.5 2.7 8.7 6.5 1.5 1 1 0 1 1 1 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal CENP-F_leu_zip PF10473.9 gi|568163355|ref|YP_008946696.1| - 3.6 7.6 17.9 0.59 10.2 2.9 2.3 1 1 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DASH_Dad4 PF08650.10 gi|568163356|ref|YP_008946697.1| - 0.058 13.4 0.2 0.12 12.4 0.1 1.5 1 1 1 2 2 2 0 DASH complex subunit Dad4 Brix PF04427.18 gi|568163357|ref|YP_008946698.1| - 0.0076 16.4 0.0 0.01 16.0 0.0 1.4 1 1 0 1 1 1 1 Brix domain Ribosomal_L37ae PF01780.19 gi|568163358|ref|YP_008946699.1| - 2.8e-23 81.8 7.3 2.9e-23 81.7 7.3 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family Zn_Tnp_IS1595 PF12760.7 gi|568163358|ref|YP_008946699.1| - 0.00062 19.7 6.2 0.00062 19.7 4.9 1.6 1 1 1 2 2 2 1 Transposase zinc-ribbon domain Rep_fac-A_C PF08646.10 gi|568163358|ref|YP_008946699.1| - 0.0069 16.1 1.4 0.0081 15.9 1.4 1.1 1 0 0 1 1 1 1 Replication factor-A C terminal domain DnaJ_CXXCXGXG PF00684.19 gi|568163358|ref|YP_008946699.1| - 0.0096 16.3 0.8 0.013 15.9 0.8 1.2 1 0 0 1 1 1 1 DnaJ central domain TF_Zn_Ribbon PF08271.12 gi|568163358|ref|YP_008946699.1| - 0.025 14.1 0.2 0.037 13.5 0.2 1.3 1 0 0 1 1 1 0 TFIIB zinc-binding zf-RRPl_C4 PF17026.5 gi|568163358|ref|YP_008946699.1| - 0.028 14.5 0.6 0.039 14.1 0.6 1.2 1 0 0 1 1 1 0 Putative ribonucleoprotein zinc-finger pf C4 type zf-TFIIB PF13453.6 gi|568163358|ref|YP_008946699.1| - 0.032 13.6 0.5 0.052 12.9 0.5 1.3 1 0 0 1 1 1 0 Transcription factor zinc-finger DUF4379 PF14311.6 gi|568163358|ref|YP_008946699.1| - 0.068 13.5 7.7 1.8 9.0 0.7 2.1 2 0 0 2 2 2 0 Probable Zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|568163358|ref|YP_008946699.1| - 0.071 13.0 1.5 0.089 12.7 1.5 1.2 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zinc_ribbon_5 PF13719.6 gi|568163358|ref|YP_008946699.1| - 0.25 11.1 2.4 1.5 8.6 2.4 2.0 1 1 0 1 1 1 0 zinc-ribbon domain RNase_PH PF01138.21 gi|568163359|ref|YP_008946700.1| - 3.1e-31 108.6 0.0 4.9e-31 108.0 0.0 1.3 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 gi|568163359|ref|YP_008946700.1| - 2.6e-09 37.0 0.1 1.2e-08 34.8 0.0 2.1 2 0 0 2 2 2 1 3' exoribonuclease family, domain 2 DUF1189 PF06691.11 gi|568163359|ref|YP_008946700.1| - 0.024 14.2 0.9 0.031 13.9 0.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1189) Fimbrial_K88 PF02432.15 gi|568163359|ref|YP_008946700.1| - 0.14 12.1 0.0 0.23 11.4 0.0 1.3 1 0 0 1 1 1 0 Fimbrial, major and minor subunit RNase_PH PF01138.21 gi|568163360|ref|YP_008946701.1| - 7.9e-37 126.7 0.0 1.2e-36 126.1 0.0 1.3 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 gi|568163360|ref|YP_008946701.1| - 4.2e-13 49.1 0.0 8e-13 48.2 0.0 1.5 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 KH_6 PF15985.5 gi|568163361|ref|YP_008946702.1| - 3.6e-06 27.2 0.1 7.8e-06 26.2 0.1 1.5 1 0 0 1 1 1 1 KH domain KH_1 PF00013.29 gi|568163361|ref|YP_008946702.1| - 0.00017 21.4 0.6 0.00037 20.3 0.6 1.6 1 0 0 1 1 1 1 KH domain S1 PF00575.23 gi|568163361|ref|YP_008946702.1| - 0.0013 19.0 0.0 0.0031 17.8 0.0 1.7 1 0 0 1 1 1 1 S1 RNA binding domain KH_2 PF07650.17 gi|568163361|ref|YP_008946702.1| - 0.027 14.3 0.1 0.059 13.2 0.1 1.6 1 0 0 1 1 1 0 KH domain SBDS PF01172.18 gi|568163362|ref|YP_008946703.1| - 9e-23 80.2 0.1 1.7e-22 79.3 0.1 1.5 1 0 0 1 1 1 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein SBDS_C PF09377.10 gi|568163362|ref|YP_008946703.1| - 1.5e-21 76.6 0.4 2.3e-21 76.0 0.4 1.3 1 0 0 1 1 1 1 SBDS protein C-terminal domain EFG_C PF00679.24 gi|568163362|ref|YP_008946703.1| - 0.07 13.2 0.0 0.29 11.2 0.0 1.9 2 0 0 2 2 2 0 Elongation factor G C-terminus Proteasome PF00227.26 gi|568163363|ref|YP_008946704.1| - 2.1e-59 200.2 0.0 3.2e-59 199.6 0.0 1.3 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 gi|568163363|ref|YP_008946704.1| - 3.9e-13 48.8 1.5 8.6e-13 47.7 0.5 2.1 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature RNase_P_Rpp14 PF01900.19 gi|568163364|ref|YP_008946705.1| - 7.2e-11 42.3 0.0 1.2e-10 41.6 0.0 1.3 1 0 0 1 1 1 1 Rpp14/Pop5 family RNase_P_p30 PF01876.16 gi|568163365|ref|YP_008946706.1| - 0.001 18.6 0.6 0.034 13.6 0.6 2.1 1 1 0 1 1 1 1 RNase P subunit p30 Como_SCP PF02248.16 gi|568163365|ref|YP_008946706.1| - 0.049 13.2 0.1 0.068 12.7 0.1 1.2 1 0 0 1 1 1 0 Small coat protein RNA_binding PF01877.17 gi|568163366|ref|YP_008946707.1| - 1.3e-28 99.7 2.6 1.6e-28 99.4 2.6 1.1 1 0 0 1 1 1 1 RNA binding Ribosomal_L15e PF00827.17 gi|568163367|ref|YP_008946708.1| - 6.8e-72 241.2 8.3 6.8e-72 241.2 8.3 1.5 1 1 0 1 1 1 1 Ribosomal L15 MMR_HSR1_C PF08438.10 gi|568163368|ref|YP_008946709.1| - 8.4e-36 123.0 1.5 1.2e-35 122.4 0.4 1.8 2 0 0 2 2 2 1 GTPase of unknown function C-terminal MMR_HSR1 PF01926.23 gi|568163368|ref|YP_008946709.1| - 3.7e-21 75.3 1.8 2.6e-20 72.6 0.0 2.9 3 1 0 3 3 3 1 50S ribosome-binding GTPase TGS PF02824.21 gi|568163368|ref|YP_008946709.1| - 3.7e-12 46.1 0.1 8.1e-12 45.0 0.1 1.6 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.18 gi|568163368|ref|YP_008946709.1| - 1.5e-07 31.1 0.1 0.00015 21.4 0.1 3.1 3 0 0 3 3 3 2 Ferrous iron transport protein B MMR_HSR1_Xtn PF16897.5 gi|568163368|ref|YP_008946709.1| - 0.0098 15.9 0.6 0.13 12.2 0.4 2.5 1 1 1 2 2 2 1 C-terminal region of MMR_HSR1 domain YchF-GTPase_C PF06071.13 gi|568163368|ref|YP_008946709.1| - 0.01 16.0 0.1 0.31 11.3 0.0 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF933) NTP_transferase PF00483.23 gi|568163369|ref|YP_008946710.1| - 1.5e-36 126.2 0.0 2e-36 125.8 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 gi|568163369|ref|YP_008946710.1| - 6.9e-27 92.1 12.5 8.1e-08 31.7 0.0 4.7 2 1 2 4 4 4 4 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 gi|568163369|ref|YP_008946710.1| - 4e-14 53.3 0.0 5.5e-14 52.8 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep_2 PF14602.6 gi|568163369|ref|YP_008946710.1| - 5.4e-07 29.2 10.5 0.0063 16.2 1.1 4.1 4 1 1 5 5 5 3 Hexapeptide repeat of succinyl-transferase IspD PF01128.19 gi|568163369|ref|YP_008946710.1| - 1e-06 28.6 0.1 1.9e-06 27.8 0.1 1.5 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CTP_transf_3 PF02348.19 gi|568163369|ref|YP_008946710.1| - 0.015 15.2 0.0 0.023 14.6 0.0 1.2 1 0 0 1 1 1 0 Cytidylyltransferase DUF4954 PF16314.5 gi|568163369|ref|YP_008946710.1| - 0.047 11.8 1.1 0.24 9.5 0.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4954) Ribosomal_S3Ae PF01015.18 gi|568163370|ref|YP_008946711.1| - 1e-66 224.4 1.5 1.1e-66 224.2 1.5 1.0 1 0 0 1 1 1 1 Ribosomal S3Ae family DUF3234 PF11572.8 gi|568163370|ref|YP_008946711.1| - 0.052 13.7 0.0 3.9 7.7 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3234) SpoU_methylase PF00588.19 gi|568163371|ref|YP_008946712.1| - 1.1e-28 100.2 0.0 1.4e-28 99.8 0.0 1.2 1 0 0 1 1 1 1 SpoU rRNA Methylase family Methyltrn_RNA_4 PF09936.9 gi|568163371|ref|YP_008946712.1| - 0.00062 19.7 0.0 0.021 14.7 0.0 2.3 1 1 0 1 1 1 1 SAM-dependent RNA methyltransferase PrmA PF06325.13 gi|568163372|ref|YP_008946713.1| - 2.4e-12 46.9 0.1 3.4e-12 46.4 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 gi|568163372|ref|YP_008946713.1| - 2.4e-12 46.7 0.0 3.6e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 gi|568163372|ref|YP_008946713.1| - 8.6e-06 26.4 0.0 1.3e-05 25.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 gi|568163372|ref|YP_008946713.1| - 1.2e-05 25.1 0.0 1.6e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Cons_hypoth95 PF03602.15 gi|568163372|ref|YP_008946713.1| - 8.3e-05 22.3 0.0 0.00013 21.7 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_31 PF13847.6 gi|568163372|ref|YP_008946713.1| - 0.00079 19.2 0.0 0.00094 19.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|568163372|ref|YP_008946713.1| - 0.0041 16.9 0.0 0.0057 16.4 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) DUF3419 PF11899.8 gi|568163372|ref|YP_008946713.1| - 0.0042 16.3 0.0 0.0059 15.8 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3419) Methyltransf_23 PF13489.6 gi|568163372|ref|YP_008946713.1| - 0.0044 16.9 0.0 0.0062 16.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|568163372|ref|YP_008946713.1| - 0.0049 16.8 0.1 0.023 14.6 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain CMAS PF02353.20 gi|568163372|ref|YP_008946713.1| - 0.005 16.2 0.0 0.0068 15.7 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_11 PF08241.12 gi|568163372|ref|YP_008946713.1| - 0.0078 16.8 0.0 0.013 16.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain N6_Mtase PF02384.16 gi|568163372|ref|YP_008946713.1| - 0.0095 15.2 0.1 0.06 12.6 0.1 1.9 1 1 0 1 1 1 1 N-6 DNA Methylase RrnaAD PF00398.20 gi|568163372|ref|YP_008946713.1| - 0.012 14.7 0.1 0.022 13.9 0.0 1.4 2 0 0 2 2 2 0 Ribosomal RNA adenine dimethylase FtsJ PF01728.19 gi|568163372|ref|YP_008946713.1| - 0.017 15.2 0.0 0.019 15.1 0.0 1.2 1 0 0 1 1 1 0 FtsJ-like methyltransferase Methyltransf_32 PF13679.6 gi|568163372|ref|YP_008946713.1| - 0.024 14.7 0.0 0.035 14.1 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_12 PF08242.12 gi|568163372|ref|YP_008946713.1| - 0.052 14.3 0.0 0.083 13.6 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain DOT1 PF08123.13 gi|568163372|ref|YP_008946713.1| - 0.082 12.4 0.0 0.13 11.8 0.0 1.3 1 0 0 1 1 1 0 Histone methylation protein DOT1 MetW PF07021.12 gi|568163372|ref|YP_008946713.1| - 0.087 12.4 0.0 0.13 11.8 0.0 1.3 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW MethyltransfD12 PF02086.15 gi|568163372|ref|YP_008946713.1| - 0.11 12.2 0.1 0.35 10.5 0.0 1.7 1 1 0 2 2 2 0 D12 class N6 adenine-specific DNA methyltransferase RrnaAD PF00398.20 gi|568163373|ref|YP_008946714.1| - 7.4e-20 71.1 1.4 2.6e-19 69.3 1.4 1.7 1 1 0 1 1 1 1 Ribosomal RNA adenine dimethylase DUF655 PF04919.12 gi|568163374|ref|YP_008946715.1| - 3.4e-58 196.6 3.1 4.2e-58 196.3 3.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF655) HHH_6 PF14579.6 gi|568163374|ref|YP_008946715.1| - 0.05 13.9 0.0 0.11 12.7 0.0 1.6 1 0 0 1 1 1 0 Helix-hairpin-helix motif RNA_pol_Rpb4 PF03874.16 gi|568163375|ref|YP_008946716.1| - 4.5e-07 30.2 1.3 5.3e-07 30.0 1.3 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb4 DUF1160 PF06648.11 gi|568163375|ref|YP_008946716.1| - 0.0063 16.5 1.2 0.033 14.2 0.1 2.1 1 1 1 2 2 2 1 Protein of unknown function (DUF1160) MICSWaP PF17018.5 gi|568163375|ref|YP_008946716.1| - 0.022 14.3 1.0 0.028 14.0 1.0 1.1 1 0 0 1 1 1 0 Spore wall protein RIH_assoc PF08454.11 gi|568163375|ref|YP_008946716.1| - 0.033 14.0 0.2 0.13 12.1 0.2 1.8 1 1 0 1 1 1 0 RyR and IP3R Homology associated DUF2209 PF09974.9 gi|568163375|ref|YP_008946716.1| - 0.093 13.1 1.3 0.26 11.6 0.6 1.9 1 1 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2209) Arch_fla_DE PF04659.13 gi|568163375|ref|YP_008946716.1| - 0.093 12.6 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Archaeal flagella protein HTH_36 PF13730.6 gi|568163375|ref|YP_008946716.1| - 0.099 12.6 1.6 2.2 8.3 0.1 2.7 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_15 PF12324.8 gi|568163375|ref|YP_008946716.1| - 0.11 12.5 0.0 0.17 11.9 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of alkylmercury lyase NAF PF03822.14 gi|568163375|ref|YP_008946716.1| - 0.57 10.4 2.4 2 8.7 0.1 2.5 3 0 0 3 3 3 0 NAF domain Ribosomal_L21e PF01157.18 gi|568163376|ref|YP_008946717.1| - 4e-35 119.7 2.5 4.5e-35 119.5 2.5 1.0 1 0 0 1 1 1 1 Ribosomal protein L21e Utp13 PF08625.11 gi|568164778|ref|YP_008946718.1| - 0.013 15.4 0.0 0.015 15.2 0.0 1.1 1 0 0 1 1 1 0 Utp13 specific WD40 associated domain Beta-Casp PF10996.8 gi|568163377|ref|YP_008946719.1| - 1.9e-23 82.9 0.0 4e-23 81.8 0.0 1.6 1 0 0 1 1 1 1 Beta-Casp domain KH_7 PF17214.3 gi|568163377|ref|YP_008946719.1| - 6.8e-20 70.8 9.8 2.7e-17 62.5 1.2 3.2 2 1 1 3 3 3 2 KH domain RMMBL PF07521.12 gi|568163377|ref|YP_008946719.1| - 1.5e-16 60.1 0.1 3.4e-15 55.7 0.0 2.5 2 0 0 2 2 2 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B PF00753.27 gi|568163377|ref|YP_008946719.1| - 1e-13 51.8 0.8 1.2e-12 48.3 0.8 2.3 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_6 PF16661.5 gi|568163377|ref|YP_008946719.1| - 7.3e-13 48.4 0.0 2.7e-12 46.5 0.0 2.0 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|568163377|ref|YP_008946719.1| - 8.3e-11 41.8 0.2 1.7e-10 40.8 0.2 1.5 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|568163377|ref|YP_008946719.1| - 3.6e-05 23.7 0.3 0.00019 21.4 0.0 2.3 2 1 0 2 2 2 1 Beta-lactamase superfamily domain A-2_8-polyST PF07388.11 gi|568163377|ref|YP_008946719.1| - 0.013 14.2 0.9 0.036 12.7 1.3 1.5 2 0 0 2 2 2 0 Alpha-2,8-polysialyltransferase (POLYST) KH_2 PF07650.17 gi|568163377|ref|YP_008946719.1| - 0.02 14.7 9.9 0.037 13.8 1.7 3.1 1 1 1 2 2 2 0 KH domain Fe-ADH_2 PF13685.6 gi|568163378|ref|YP_008946720.1| - 4.3e-62 210.1 0.0 5.2e-62 209.8 0.0 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.19 gi|568163378|ref|YP_008946720.1| - 2.7e-25 89.0 0.1 7.3e-24 84.3 0.1 2.0 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.20 gi|568163378|ref|YP_008946720.1| - 1.2e-10 41.0 0.2 1.4e-09 37.5 0.2 2.2 1 1 0 1 1 1 1 3-dehydroquinate synthase FKBP_C PF00254.28 gi|568163379|ref|YP_008946721.1| - 2.4e-15 56.6 0.6 6.6e-15 55.2 0.2 2.0 1 1 1 2 2 2 1 FKBP-type peptidyl-prolyl cis-trans isomerase FKBP26_C PF18046.1 gi|568163379|ref|YP_008946721.1| - 1.8e-07 31.1 1.4 4.2e-07 30.0 1.4 1.7 1 0 0 1 1 1 1 FKBP26_C-terminal Ribosomal_L37e PF01907.19 gi|568163380|ref|YP_008946722.1| - 4.3e-25 87.6 9.7 4.7e-25 87.5 9.7 1.0 1 0 0 1 1 1 1 Ribosomal protein L37e Ephrin_rec_like PF07699.13 gi|568163380|ref|YP_008946722.1| - 0.0037 17.0 0.9 0.0045 16.7 0.9 1.3 1 0 0 1 1 1 1 Putative ephrin-receptor like HypA PF01155.19 gi|568163380|ref|YP_008946722.1| - 0.011 15.7 0.3 0.012 15.7 0.3 1.2 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 gi|568163380|ref|YP_008946722.1| - 0.029 14.4 1.8 0.035 14.1 1.8 1.2 1 0 0 1 1 1 0 Double zinc ribbon Spermine_synth PF01564.17 gi|568163381|ref|YP_008946723.1| - 7.3e-44 149.4 0.0 1e-43 148.9 0.0 1.2 1 0 0 1 1 1 1 Spermine/spermidine synthase domain Spermine_synt_N PF17284.2 gi|568163381|ref|YP_008946723.1| - 3.1e-10 39.8 0.0 6e-10 38.9 0.0 1.4 1 0 0 1 1 1 1 Spermidine synthase tetramerisation domain Methyltransf_25 PF13649.6 gi|568163381|ref|YP_008946723.1| - 2.2e-05 25.1 0.0 5.2e-05 23.9 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_30 PF05430.11 gi|568163381|ref|YP_008946723.1| - 0.00043 20.2 0.0 0.00076 19.4 0.0 1.4 1 0 0 1 1 1 1 S-adenosyl-L-methionine-dependent methyltransferase MTS PF05175.14 gi|568163381|ref|YP_008946723.1| - 0.00067 19.2 0.0 0.001 18.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.6 gi|568163381|ref|YP_008946723.1| - 0.0045 16.8 0.0 0.0067 16.2 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|568163381|ref|YP_008946723.1| - 0.006 17.3 0.0 0.012 16.3 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|568163381|ref|YP_008946723.1| - 0.013 16.2 0.0 0.024 15.2 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_2 PF00891.18 gi|568163381|ref|YP_008946723.1| - 0.013 14.8 0.0 0.024 13.9 0.0 1.5 1 1 0 1 1 1 0 O-methyltransferase domain AdoHcyase PF05221.17 gi|568163382|ref|YP_008946724.1| - 1.2e-75 254.5 0.0 1.7e-44 152.2 0.0 2.0 1 1 1 2 2 2 2 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.21 gi|568163382|ref|YP_008946724.1| - 6.1e-55 185.7 1.1 1.2e-54 184.7 1.1 1.5 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|568163382|ref|YP_008946724.1| - 1.7e-08 34.0 0.3 3.7e-08 32.9 0.3 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 gi|568163382|ref|YP_008946724.1| - 7.3e-06 25.7 0.1 1.4e-05 24.7 0.1 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain THF_DHG_CYH_C PF02882.19 gi|568163382|ref|YP_008946724.1| - 0.00051 19.4 0.3 0.0037 16.6 0.3 2.1 1 1 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TrkA_N PF02254.18 gi|568163382|ref|YP_008946724.1| - 0.00071 19.8 0.0 0.0019 18.5 0.0 1.7 1 0 0 1 1 1 1 TrkA-N domain 3HCDH_N PF02737.18 gi|568163382|ref|YP_008946724.1| - 0.015 15.1 0.3 0.035 14.0 0.3 1.6 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|568163382|ref|YP_008946724.1| - 0.034 14.7 0.1 0.092 13.3 0.1 1.7 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Pyr_redox PF00070.27 gi|568163382|ref|YP_008946724.1| - 0.043 14.4 0.8 0.13 12.8 0.2 2.3 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase DUF3447 PF11929.8 gi|568163382|ref|YP_008946724.1| - 0.078 12.9 0.0 0.18 11.8 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3447) AlaDh_PNT_C PF01262.21 gi|568163382|ref|YP_008946724.1| - 0.12 11.7 1.5 0.96 8.7 1.5 2.2 1 1 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain NAD_binding_7 PF13241.6 gi|568163382|ref|YP_008946724.1| - 0.12 12.8 0.1 0.32 11.5 0.1 1.8 1 0 0 1 1 1 0 Putative NAD(P)-binding DUF2122 PF09895.9 gi|568163383|ref|YP_008946726.1| - 1.2e-32 112.5 0.1 1.6e-32 112.1 0.1 1.2 1 0 0 1 1 1 1 RecB-family nuclease (DUF2122) TIR_3 PF18567.1 gi|568163383|ref|YP_008946726.1| - 0.024 14.7 0.0 0.03 14.3 0.0 1.2 1 0 0 1 1 1 0 Toll/interleukin-1 receptor domain DNA_methylase PF00145.17 gi|568163384|ref|YP_008946727.1| - 9.7e-51 173.1 0.0 7.4e-37 127.4 0.0 2.0 1 1 1 2 2 2 2 C-5 cytosine-specific DNA methylase Methyltransf_15 PF09445.10 gi|568163384|ref|YP_008946727.1| - 0.0092 15.6 0.0 0.016 14.7 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase TFIIE_alpha PF02002.17 gi|568163385|ref|YP_008946728.1| - 2.8e-20 72.1 6.4 2.8e-20 72.1 6.4 2.0 2 0 0 2 2 2 1 TFIIE alpha subunit Rrf2 PF02082.20 gi|568163385|ref|YP_008946728.1| - 0.00042 20.6 0.0 0.00068 19.9 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator Fe_dep_repress PF01325.19 gi|568163385|ref|YP_008946728.1| - 0.002 18.3 0.1 0.0038 17.4 0.1 1.4 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain Sigma70_r3 PF04539.16 gi|568163385|ref|YP_008946728.1| - 0.0027 17.8 0.0 0.0027 17.8 0.0 2.4 3 0 0 3 3 3 1 Sigma-70 region 3 HTH_9 PF08221.11 gi|568163385|ref|YP_008946728.1| - 0.0093 16.0 0.0 0.025 14.7 0.0 1.8 2 0 0 2 2 2 1 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_20 PF12840.7 gi|568163385|ref|YP_008946728.1| - 0.015 15.4 0.0 0.026 14.6 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_IclR PF09339.10 gi|568163385|ref|YP_008946728.1| - 0.017 14.9 0.0 0.024 14.5 0.0 1.2 1 0 0 1 1 1 0 IclR helix-turn-helix domain Phage_rep_org_N PF09681.10 gi|568163385|ref|YP_008946728.1| - 0.022 14.7 0.4 0.075 13.0 0.1 2.0 2 0 0 2 2 2 0 N-terminal phage replisome organiser (Phage_rep_org_N) TrmB PF01978.19 gi|568163385|ref|YP_008946728.1| - 0.035 14.0 1.2 0.044 13.7 0.2 1.7 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_Crp_2 PF13545.6 gi|568163385|ref|YP_008946728.1| - 0.036 14.0 0.0 0.066 13.2 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain CemA PF03040.14 gi|568163385|ref|YP_008946728.1| - 0.038 13.9 2.3 1.6 8.6 0.0 2.1 2 0 0 2 2 2 0 CemA family DUF2316 PF10078.9 gi|568163385|ref|YP_008946728.1| - 0.05 13.8 0.1 0.23 11.7 0.0 2.0 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2316) HrcA_DNA-bdg PF03444.15 gi|568163385|ref|YP_008946728.1| - 0.1 12.2 0.2 0.74 9.5 0.0 2.2 2 0 0 2 2 2 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Trm56 PF01994.16 gi|568163386|ref|YP_008946729.1| - 2.1e-47 160.0 0.1 2.6e-47 159.6 0.1 1.1 1 0 0 1 1 1 1 tRNA ribose 2'-O-methyltransferase, aTrm56 SpoU_methylase PF00588.19 gi|568163386|ref|YP_008946729.1| - 0.03 14.5 0.0 0.044 14.0 0.0 1.1 1 0 0 1 1 1 0 SpoU rRNA Methylase family MMR_HSR1 PF01926.23 gi|568163387|ref|YP_008946730.1| - 2e-19 69.7 0.7 4.5e-19 68.6 0.1 1.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase GTP-bdg_M PF16360.5 gi|568163387|ref|YP_008946730.1| - 3.5e-17 62.8 1.6 5.7e-17 62.1 1.6 1.4 1 0 0 1 1 1 1 GTP-binding GTPase Middle Region GTP-bdg_N PF13167.6 gi|568163387|ref|YP_008946730.1| - 2.3e-10 41.0 0.4 5.1e-10 39.9 0.4 1.6 1 0 0 1 1 1 1 GTP-binding GTPase N-terminal FeoB_N PF02421.18 gi|568163387|ref|YP_008946730.1| - 3e-10 39.8 0.3 8.8e-10 38.3 0.3 1.8 1 1 0 1 1 1 1 Ferrous iron transport protein B GTP_EFTU PF00009.27 gi|568163387|ref|YP_008946730.1| - 1.4e-07 31.3 0.4 7.8e-05 22.3 0.4 2.3 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain SRPRB PF09439.10 gi|568163387|ref|YP_008946730.1| - 1.9e-06 27.4 0.4 4.3e-06 26.3 0.2 1.8 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit RsgA_GTPase PF03193.16 gi|568163387|ref|YP_008946730.1| - 1.9e-05 24.7 3.2 0.029 14.3 0.1 2.8 3 0 0 3 3 3 2 RsgA GTPase ABC_tran PF00005.27 gi|568163387|ref|YP_008946730.1| - 0.001 19.6 0.3 0.0027 18.2 0.2 1.7 1 1 0 1 1 1 1 ABC transporter Arf PF00025.21 gi|568163387|ref|YP_008946730.1| - 0.0011 18.4 2.4 0.0076 15.7 1.8 2.5 1 1 0 1 1 1 1 ADP-ribosylation factor family Spore_IV_A PF09547.10 gi|568163387|ref|YP_008946730.1| - 0.0041 16.1 1.9 0.075 12.0 0.1 2.5 2 1 1 3 3 3 1 Stage IV sporulation protein A (spore_IV_A) MMR_HSR1_Xtn PF16897.5 gi|568163387|ref|YP_008946730.1| - 0.0041 17.1 0.3 0.017 15.1 0.3 2.1 1 1 0 1 1 1 1 C-terminal region of MMR_HSR1 domain ATP_bind_1 PF03029.17 gi|568163387|ref|YP_008946730.1| - 0.016 15.0 0.6 0.49 10.1 0.0 2.3 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_23 PF13476.6 gi|568163387|ref|YP_008946730.1| - 0.028 14.9 5.8 0.028 14.9 5.8 2.3 1 1 1 2 2 2 0 AAA domain AAA_29 PF13555.6 gi|568163387|ref|YP_008946730.1| - 0.046 13.5 0.0 0.097 12.4 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain Dynamin_N PF00350.23 gi|568163387|ref|YP_008946730.1| - 0.048 13.7 2.4 0.19 11.7 0.1 2.6 2 1 1 3 3 2 0 Dynamin family TniB PF05621.11 gi|568163387|ref|YP_008946730.1| - 0.05 13.0 1.0 0.47 9.8 0.1 2.3 2 0 0 2 2 2 0 Bacterial TniB protein AAA_21 PF13304.6 gi|568163387|ref|YP_008946730.1| - 0.053 13.3 1.2 0.071 12.9 0.2 1.7 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system NTP_transf_2 PF01909.23 gi|568163387|ref|YP_008946730.1| - 0.058 13.7 2.2 1.6 9.1 2.2 2.7 1 1 0 1 1 1 0 Nucleotidyltransferase domain cobW PF02492.19 gi|568163387|ref|YP_008946730.1| - 0.16 11.5 4.0 1.1 8.8 0.3 2.6 1 1 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Pro_sub2 PF18513.1 gi|568163387|ref|YP_008946730.1| - 2.1 8.5 6.5 0.84 9.8 0.2 2.8 3 0 0 3 3 3 0 Prodomain subtilisin 2 HTH_3 PF01381.22 gi|568163388|ref|YP_008946731.1| - 2.4e-11 43.5 2.9 4.4e-11 42.7 2.9 1.5 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|568163388|ref|YP_008946731.1| - 2.9e-08 33.9 0.0 4.5e-08 33.3 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|568163388|ref|YP_008946731.1| - 2.1e-07 30.7 1.3 1.1e-05 25.2 0.8 2.5 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|568163388|ref|YP_008946731.1| - 6.6e-07 29.3 1.6 6.6e-07 29.3 1.6 2.8 2 1 1 3 3 3 1 Helix-turn-helix domain MqsA_antitoxin PF15731.5 gi|568163388|ref|YP_008946731.1| - 0.00067 19.8 3.5 0.0026 17.9 3.5 1.9 1 1 0 1 1 1 1 Antitoxin component of bacterial toxin-antitoxin system, MqsA HTH_37 PF13744.6 gi|568163388|ref|YP_008946731.1| - 0.0066 16.4 1.0 0.013 15.4 1.0 1.6 1 1 0 1 1 1 1 Helix-turn-helix domain DZR PF12773.7 gi|568163388|ref|YP_008946731.1| - 0.011 15.7 0.2 0.022 14.8 0.2 1.4 1 0 0 1 1 1 0 Double zinc ribbon DUF4428 PF14471.6 gi|568163388|ref|YP_008946731.1| - 0.026 14.5 4.8 0.069 13.1 4.8 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4428) zinc_ribbon_2 PF13240.6 gi|568163388|ref|YP_008946731.1| - 0.04 13.6 2.5 0.97 9.2 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain HTH_6 PF01418.17 gi|568163388|ref|YP_008946731.1| - 0.054 13.5 0.1 0.1 12.6 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family HTH_23 PF13384.6 gi|568163388|ref|YP_008946731.1| - 0.062 13.1 0.3 0.19 11.6 0.3 1.8 1 1 0 1 1 1 0 Homeodomain-like domain Pou PF00157.17 gi|568163388|ref|YP_008946731.1| - 0.11 12.5 0.7 0.64 10.0 0.8 2.2 2 1 0 2 2 2 0 Pou domain - N-terminal to homeobox domain Relaxase PF03432.14 gi|568163388|ref|YP_008946731.1| - 0.17 11.5 3.9 0.23 11.1 3.9 1.1 1 0 0 1 1 1 0 Relaxase/Mobilisation nuclease domain HTH_Tnp_ISL3 PF13542.6 gi|568163388|ref|YP_008946731.1| - 0.17 11.3 0.0 0.42 10.1 0.0 1.6 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 HTH_26 PF13443.6 gi|568163388|ref|YP_008946731.1| - 0.19 12.2 0.8 0.51 10.8 0.3 2.0 2 1 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain GRDP-like PF07173.12 gi|568163388|ref|YP_008946731.1| - 0.2 12.3 2.2 0.28 11.8 2.2 1.1 1 0 0 1 1 1 0 Glycine-rich domain-containing protein-like PIN_2 PF10130.9 gi|568163388|ref|YP_008946731.1| - 0.8 9.9 3.9 4.5 7.5 0.6 2.0 1 1 1 2 2 2 0 PIN domain RecR PF02132.15 gi|568163388|ref|YP_008946731.1| - 1.9 8.2 6.5 5.5 6.7 0.1 3.2 3 0 0 3 3 3 0 RecR protein AAA PF00004.29 gi|568163389|ref|YP_008946732.1| - 4.2e-43 146.9 0.1 1.4e-42 145.2 0.1 1.9 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|568163389|ref|YP_008946732.1| - 7.8e-15 54.4 0.1 2e-14 53.1 0.1 1.8 1 0 0 1 1 1 1 AAA+ lid domain Prot_ATP_ID_OB PF16450.5 gi|568163389|ref|YP_008946732.1| - 7.5e-10 38.6 0.2 1.8e-09 37.4 0.2 1.7 1 0 0 1 1 1 1 Proteasomal ATPase OB C-terminal domain AAA_2 PF07724.14 gi|568163389|ref|YP_008946732.1| - 5.8e-07 29.8 0.0 1.5e-06 28.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_16 PF13191.6 gi|568163389|ref|YP_008946732.1| - 1.5e-06 28.7 0.1 0.00024 21.5 0.0 2.6 1 1 1 2 2 2 1 AAA ATPase domain AAA_5 PF07728.14 gi|568163389|ref|YP_008946732.1| - 1.4e-05 25.1 0.2 7e-05 22.8 0.2 2.2 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 gi|568163389|ref|YP_008946732.1| - 2.2e-05 24.3 0.0 5.6e-05 22.9 0.0 1.7 2 0 0 2 2 1 1 Holliday junction DNA helicase RuvB P-loop domain Prot_ATP_OB_N PF17758.1 gi|568163389|ref|YP_008946732.1| - 2.4e-05 23.9 0.1 6.8e-05 22.4 0.1 1.7 1 0 0 1 1 1 1 Proteasomal ATPase OB N-terminal domain AAA_22 PF13401.6 gi|568163389|ref|YP_008946732.1| - 4.3e-05 23.8 0.3 0.0033 17.7 0.0 2.8 1 1 2 3 3 2 1 AAA domain DUF815 PF05673.13 gi|568163389|ref|YP_008946732.1| - 0.00023 20.4 0.0 0.00042 19.6 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_28 PF13521.6 gi|568163389|ref|YP_008946732.1| - 0.0005 20.4 0.0 0.001 19.4 0.0 1.6 1 0 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 gi|568163389|ref|YP_008946732.1| - 0.0011 18.4 0.6 0.0038 16.7 0.2 2.0 2 1 0 2 2 1 1 Magnesium chelatase, subunit ChlI AAA_33 PF13671.6 gi|568163389|ref|YP_008946732.1| - 0.0017 18.5 0.0 0.0057 16.8 0.0 1.9 2 0 0 2 2 1 1 AAA domain AAA_18 PF13238.6 gi|568163389|ref|YP_008946732.1| - 0.0018 18.8 0.0 0.006 17.1 0.0 2.1 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 gi|568163389|ref|YP_008946732.1| - 0.0018 18.0 0.0 0.0049 16.6 0.0 1.8 2 0 0 2 2 1 1 IstB-like ATP binding protein TIP49 PF06068.13 gi|568163389|ref|YP_008946732.1| - 0.0021 17.3 0.0 0.0046 16.2 0.0 1.6 1 0 0 1 1 1 1 TIP49 P-loop domain AAA_24 PF13479.6 gi|568163389|ref|YP_008946732.1| - 0.003 17.3 0.0 0.01 15.5 0.0 1.9 2 0 0 2 2 1 1 AAA domain AAA_14 PF13173.6 gi|568163389|ref|YP_008946732.1| - 0.0044 17.1 0.1 0.017 15.2 0.0 2.0 2 0 0 2 2 1 1 AAA domain AAA_7 PF12775.7 gi|568163389|ref|YP_008946732.1| - 0.0068 15.9 0.0 0.016 14.7 0.0 1.7 1 1 0 1 1 1 1 P-loop containing dynein motor region Sigma54_activat PF00158.26 gi|568163389|ref|YP_008946732.1| - 0.0093 15.7 0.0 0.043 13.5 0.0 2.0 2 0 0 2 2 2 1 Sigma-54 interaction domain Zeta_toxin PF06414.12 gi|568163389|ref|YP_008946732.1| - 0.01 15.1 0.1 0.028 13.7 0.0 1.7 2 0 0 2 2 2 0 Zeta toxin RNA_helicase PF00910.22 gi|568163389|ref|YP_008946732.1| - 0.015 15.7 0.0 0.035 14.5 0.0 1.7 1 0 0 1 1 1 0 RNA helicase ATPase PF06745.13 gi|568163389|ref|YP_008946732.1| - 0.02 14.2 0.3 0.042 13.2 0.0 1.7 2 0 0 2 2 1 0 KaiC NACHT PF05729.12 gi|568163389|ref|YP_008946732.1| - 0.024 14.5 0.1 0.13 12.2 0.0 2.1 2 0 0 2 2 2 0 NACHT domain PhoH PF02562.16 gi|568163389|ref|YP_008946732.1| - 0.03 13.8 0.0 0.087 12.3 0.0 1.8 1 0 0 1 1 1 0 PhoH-like protein AAA_25 PF13481.6 gi|568163389|ref|YP_008946732.1| - 0.037 13.6 0.3 0.11 12.1 0.2 1.7 1 1 0 1 1 1 0 AAA domain TsaE PF02367.17 gi|568163389|ref|YP_008946732.1| - 0.043 13.8 0.0 0.085 12.9 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE ThylakoidFormat PF11264.8 gi|568163389|ref|YP_008946732.1| - 0.049 13.3 0.7 0.15 11.7 0.3 1.9 2 0 0 2 2 2 0 Thylakoid formation protein Guanylate_kin PF00625.21 gi|568163389|ref|YP_008946732.1| - 0.05 13.3 0.2 1.8 8.2 0.0 2.9 2 1 0 3 3 3 0 Guanylate kinase Parvo_NS1 PF01057.17 gi|568163389|ref|YP_008946732.1| - 0.051 12.7 0.0 0.093 11.8 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 DivIC PF04977.15 gi|568163389|ref|YP_008946732.1| - 0.051 13.3 1.0 0.19 11.5 0.3 2.2 2 0 0 2 2 2 0 Septum formation initiator cobW PF02492.19 gi|568163389|ref|YP_008946732.1| - 0.061 12.9 0.0 0.12 12.0 0.0 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain ATPase_2 PF01637.18 gi|568163389|ref|YP_008946732.1| - 0.066 13.1 4.4 0.091 12.7 0.1 3.1 3 1 0 3 3 3 0 ATPase domain predominantly from Archaea ABC_tran PF00005.27 gi|568163389|ref|YP_008946732.1| - 0.07 13.6 0.0 0.32 11.5 0.0 2.1 2 0 0 2 2 2 0 ABC transporter Prefoldin_2 PF01920.20 gi|568163389|ref|YP_008946732.1| - 0.079 12.9 1.3 0.25 11.3 1.3 1.8 1 0 0 1 1 1 0 Prefoldin subunit Tropomyosin_1 PF12718.7 gi|568163389|ref|YP_008946732.1| - 0.081 13.1 3.2 0.18 11.9 3.2 1.5 1 0 0 1 1 1 0 Tropomyosin like AAA_30 PF13604.6 gi|568163389|ref|YP_008946732.1| - 0.084 12.6 0.0 0.16 11.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 gi|568163389|ref|YP_008946732.1| - 0.087 12.0 0.0 0.42 9.7 0.0 2.0 2 0 0 2 2 2 0 NB-ARC domain CCDC106 PF15794.5 gi|568163389|ref|YP_008946732.1| - 0.091 12.5 0.1 0.15 11.7 0.1 1.3 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 AFG1_ATPase PF03969.16 gi|568163389|ref|YP_008946732.1| - 0.1 11.5 0.0 0.15 11.0 0.0 1.3 1 0 0 1 1 1 0 AFG1-like ATPase CPT PF07931.12 gi|568163389|ref|YP_008946732.1| - 0.13 12.1 0.0 0.24 11.2 0.0 1.4 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein AAA_17 PF13207.6 gi|568163389|ref|YP_008946732.1| - 0.18 12.2 0.8 0.53 10.7 0.0 2.3 2 1 0 2 2 1 0 AAA domain AAA_11 PF13086.6 gi|568163389|ref|YP_008946732.1| - 0.19 11.5 0.9 0.57 9.9 0.0 2.2 3 0 0 3 3 2 0 AAA domain YvrJ PF12841.7 gi|568163389|ref|YP_008946732.1| - 0.19 11.3 1.9 0.72 9.4 1.1 2.4 2 0 0 2 2 2 0 YvrJ protein family bZIP_1 PF00170.21 gi|568163389|ref|YP_008946732.1| - 0.34 11.0 4.1 0.5 10.5 1.8 2.4 2 0 0 2 2 2 0 bZIP transcription factor AAA_23 PF13476.6 gi|568163389|ref|YP_008946732.1| - 7.6 7.0 9.3 3.5 8.1 0.4 3.0 2 1 0 2 2 2 0 AAA domain PUA PF01472.20 gi|568163390|ref|YP_008946733.1| - 2e-20 72.5 0.7 3e-20 72.0 0.7 1.3 1 0 0 1 1 1 1 PUA domain TGT_C2 PF14810.6 gi|568163390|ref|YP_008946733.1| - 2.6e-14 53.1 0.0 5.1e-14 52.2 0.0 1.5 2 0 0 2 2 2 1 Patch-forming domain C2 of tRNA-guanine transglycosylase UPF0113 PF03657.13 gi|568163390|ref|YP_008946733.1| - 0.00012 22.3 0.4 0.00025 21.3 0.2 1.6 2 0 0 2 2 2 1 UPF0113 PUA domain PAC2 PF09754.9 gi|568163391|ref|YP_008946734.1| - 3.2e-35 122.1 0.0 3.7e-35 121.9 0.0 1.0 1 0 0 1 1 1 1 PAC2 family TGT PF01702.18 gi|568163392|ref|YP_008946735.1| - 5.2e-66 223.2 0.0 7.4e-66 222.7 0.0 1.1 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase Lsm_C PF14894.6 gi|568163393|ref|YP_008946736.1| - 4.3e-30 103.3 0.3 7.7e-30 102.5 0.3 1.4 1 0 0 1 1 1 1 Lsm C-terminal LSM PF01423.22 gi|568163393|ref|YP_008946736.1| - 0.00033 20.3 1.5 0.0017 18.0 1.0 2.3 2 1 0 2 2 2 1 LSM domain SM-ATX PF14438.6 gi|568163393|ref|YP_008946736.1| - 0.0012 19.0 0.2 0.0039 17.3 0.2 1.8 1 1 0 1 1 1 1 Ataxin 2 SM domain Phage_sheath_1N PF17481.2 gi|568163393|ref|YP_008946736.1| - 0.03 14.8 1.3 0.59 10.7 0.2 2.1 2 0 0 2 2 2 0 Phage tail sheath protein beta-sandwich domain DUF4579 PF15158.6 gi|568163393|ref|YP_008946736.1| - 0.086 12.6 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4579) LSM14 PF12701.7 gi|568163393|ref|YP_008946736.1| - 0.2 11.8 2.4 1.9 8.6 2.4 2.8 1 1 0 1 1 1 0 Scd6-like Sm domain RNA_pol_RpbG PF16992.5 gi|568163394|ref|YP_008946737.1| - 6.5e-49 164.9 4.0 7.3e-49 164.8 4.0 1.0 1 0 0 1 1 1 1 DNA-directed RNA polymerase, subunit G Proteasome PF00227.26 gi|568163395|ref|YP_008946738.1| - 1e-50 171.9 0.2 1.2e-50 171.7 0.2 1.0 1 0 0 1 1 1 1 Proteasome subunit tRNA-synt_His PF13393.6 gi|568163396|ref|YP_008946739.1| - 3.5e-65 220.3 0.0 4.3e-65 220.0 0.0 1.1 1 0 0 1 1 1 1 Histidyl-tRNA synthetase tRNA-synt_2b PF00587.25 gi|568163396|ref|YP_008946739.1| - 6.4e-14 52.3 0.0 2.6e-13 50.3 0.0 1.9 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA-synt_2d PF01409.20 gi|568163396|ref|YP_008946739.1| - 5.5e-10 39.1 0.0 5.9e-08 32.5 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) HGTP_anticodon PF03129.20 gi|568163396|ref|YP_008946739.1| - 1.2e-08 35.0 0.6 2.9e-08 33.8 0.6 1.7 1 0 0 1 1 1 1 Anticodon binding domain tRNA_synthFbeta PF17759.1 gi|568163396|ref|YP_008946739.1| - 0.00018 21.0 0.0 0.00028 20.4 0.0 1.3 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain tRNA_int_endo PF01974.17 gi|568163397|ref|YP_008946740.1| - 1.9e-06 27.9 0.1 6.6e-06 26.1 0.1 1.8 1 1 0 1 1 1 1 tRNA intron endonuclease, catalytic C-terminal domain sCache_like PF16736.5 gi|568163397|ref|YP_008946740.1| - 0.01 15.9 0.3 0.014 15.5 0.3 1.2 1 0 0 1 1 1 0 Single Cache-like Sen15 PF09631.10 gi|568163397|ref|YP_008946740.1| - 0.032 14.5 0.1 0.036 14.4 0.1 1.1 1 0 0 1 1 1 0 Sen15 protein TF_Zn_Ribbon PF08271.12 gi|568164780|ref|YP_008946741.1| - 6.2e-11 41.6 3.8 1.3e-10 40.6 3.8 1.5 1 0 0 1 1 1 1 TFIIB zinc-binding Ribosomal_S27e PF01667.17 gi|568164780|ref|YP_008946741.1| - 0.021 14.5 1.4 0.037 13.7 1.0 1.6 2 0 0 2 2 2 0 Ribosomal protein S27 DUF1492 PF07374.11 gi|568164780|ref|YP_008946741.1| - 0.1 12.8 5.1 0.076 13.2 1.7 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1492) Zn_Tnp_IS91 PF14319.6 gi|568164780|ref|YP_008946741.1| - 0.17 11.9 1.3 0.41 10.7 1.3 1.6 1 0 0 1 1 1 0 Transposase zinc-binding domain Unstab_antitox PF09720.10 gi|568164780|ref|YP_008946741.1| - 0.25 11.4 0.4 1.2 9.2 0.0 2.0 2 0 0 2 2 2 0 Putative addiction module component zf-ribbon_3 PF13248.6 gi|568164780|ref|YP_008946741.1| - 1.9 8.0 6.2 6.9 6.2 1.2 2.4 2 1 0 2 2 2 0 zinc-ribbon domain PhnA_Zn_Ribbon PF08274.12 gi|568164780|ref|YP_008946741.1| - 3.1 7.8 11.4 12 5.9 0.3 3.2 3 0 0 3 3 3 0 PhnA Zinc-Ribbon Cpn60_TCP1 PF00118.24 gi|568163398|ref|YP_008946742.1| - 1.4e-175 584.6 16.6 1.7e-175 584.4 16.6 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family BRCT_2 PF16589.5 gi|568163398|ref|YP_008946742.1| - 0.12 12.8 0.1 6.7 7.2 0.0 2.7 2 0 0 2 2 2 0 BRCT domain, a BRCA1 C-terminus domain DUF87 PF01935.17 gi|568163399|ref|YP_008946743.1| - 2.5e-37 129.2 1.1 2.5e-37 129.2 1.1 2.2 3 0 0 3 3 3 1 Helicase HerA, central domain DUF853 PF05872.12 gi|568163399|ref|YP_008946743.1| - 2.5e-08 33.0 0.0 0.00061 18.5 0.0 2.1 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) TrwB_AAD_bind PF10412.9 gi|568163399|ref|YP_008946743.1| - 4.2e-08 32.5 0.2 2e-05 23.7 0.0 2.6 3 0 0 3 3 3 2 Type IV secretion-system coupling protein DNA-binding domain T4SS-DNA_transf PF02534.14 gi|568163399|ref|YP_008946743.1| - 2.6e-07 29.8 0.5 0.00095 18.1 0.0 2.8 3 0 0 3 3 3 2 Type IV secretory system Conjugative DNA transfer Zot PF05707.12 gi|568163399|ref|YP_008946743.1| - 1.2e-05 25.0 0.1 5.1e-05 23.0 0.0 2.0 2 0 0 2 2 2 1 Zonular occludens toxin (Zot) AAA_10 PF12846.7 gi|568163399|ref|YP_008946743.1| - 5.3e-05 22.3 0.8 0.24 10.3 0.2 2.3 2 0 0 2 2 2 2 AAA-like domain TraG-D_C PF12696.7 gi|568163399|ref|YP_008946743.1| - 0.0011 18.9 0.4 0.0042 17.1 0.1 2.1 2 0 0 2 2 2 1 TraM recognition site of TraD and TraG AAA_22 PF13401.6 gi|568163399|ref|YP_008946743.1| - 0.0014 18.9 0.9 1.9 8.8 0.1 2.8 3 1 0 3 3 3 2 AAA domain AAA PF00004.29 gi|568163399|ref|YP_008946743.1| - 0.0014 19.0 0.6 2.4 8.6 0.2 3.2 3 0 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) DDE_1 PF03184.19 gi|568163399|ref|YP_008946743.1| - 0.016 14.9 0.5 0.032 13.9 0.5 1.4 1 0 0 1 1 1 0 DDE superfamily endonuclease DUF5381 PF17353.2 gi|568163399|ref|YP_008946743.1| - 0.023 14.4 5.5 0.07 12.9 5.5 1.8 1 0 0 1 1 1 0 Family of unknown function (DUF5381) AAA_16 PF13191.6 gi|568163399|ref|YP_008946743.1| - 0.038 14.4 0.4 1.9 8.8 0.3 3.1 3 1 0 3 3 2 0 AAA ATPase domain Zeta_toxin PF06414.12 gi|568163399|ref|YP_008946743.1| - 0.078 12.2 0.0 0.17 11.1 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin CbiA PF01656.23 gi|568163399|ref|YP_008946743.1| - 0.089 12.9 0.5 0.57 10.2 0.0 2.4 2 1 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain IPT PF01745.16 gi|568163399|ref|YP_008946743.1| - 0.11 11.9 0.0 0.33 10.3 0.0 1.8 1 0 0 1 1 1 0 Isopentenyl transferase ResIII PF04851.15 gi|568163399|ref|YP_008946743.1| - 0.15 12.1 5.4 0.23 11.4 0.8 2.9 2 1 0 2 2 2 0 Type III restriction enzyme, res subunit ThiS PF02597.20 gi|568163400|ref|YP_008946745.1| - 4e-06 27.4 0.0 4.3e-06 27.3 0.0 1.0 1 0 0 1 1 1 1 ThiS family Urm1 PF09138.11 gi|568163400|ref|YP_008946745.1| - 4e-06 27.1 0.2 4.5e-06 26.9 0.2 1.1 1 0 0 1 1 1 1 Urm1 (Ubiquitin related modifier) Ribosomal_S17e PF00833.18 gi|568163401|ref|YP_008946746.1| - 1.6e-14 53.8 1.2 1.8e-14 53.7 1.2 1.0 1 0 0 1 1 1 1 Ribosomal S17 DUF2797 PF10977.8 gi|568163401|ref|YP_008946746.1| - 0.022 14.7 1.5 0.023 14.6 1.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2797) DUF3536 PF12055.8 gi|568163401|ref|YP_008946746.1| - 0.04 13.2 0.9 0.045 13.0 0.9 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF3536) MinE PF03776.14 gi|568163401|ref|YP_008946746.1| - 0.07 13.1 1.6 0.22 11.5 0.5 2.0 1 1 1 2 2 2 0 Septum formation topological specificity factor MinE YtxH PF12732.7 gi|568163401|ref|YP_008946746.1| - 0.7 10.5 7.5 8.5 7.0 7.5 2.0 1 1 0 1 1 1 0 YtxH-like protein FBPase_3 PF01950.16 gi|568163402|ref|YP_008946747.1| - 6.6e-179 594.7 0.0 7.5e-179 594.5 0.0 1.0 1 0 0 1 1 1 1 Fructose-1,6-bisphosphatase ABC_tran PF00005.27 gi|568163403|ref|YP_008946748.1| - 4e-37 127.8 0.0 1.1e-18 68.1 0.0 2.4 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 gi|568163403|ref|YP_008946748.1| - 1.6e-16 61.0 9.5 0.0039 17.0 0.1 4.3 2 2 1 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system RLI PF04068.15 gi|568163403|ref|YP_008946748.1| - 2e-12 46.7 2.3 4.7e-12 45.5 2.3 1.7 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI SMC_N PF02463.19 gi|568163403|ref|YP_008946748.1| - 1e-10 41.5 6.1 0.002 17.6 2.9 4.2 3 1 0 3 3 3 2 RecF/RecN/SMC N terminal domain Fer4 PF00037.27 gi|568163403|ref|YP_008946748.1| - 3.9e-07 29.6 6.4 3.9e-07 29.6 6.4 2.6 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_10 PF13237.6 gi|568163403|ref|YP_008946748.1| - 8.5e-06 25.8 8.3 0.00024 21.1 1.0 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain MMR_HSR1 PF01926.23 gi|568163403|ref|YP_008946748.1| - 8.7e-06 25.8 0.3 0.24 11.5 0.0 3.1 2 1 0 2 2 2 2 50S ribosome-binding GTPase AAA_14 PF13173.6 gi|568163403|ref|YP_008946748.1| - 4.1e-05 23.6 1.3 0.33 11.0 0.0 3.0 2 1 1 3 3 3 2 AAA domain AAA_23 PF13476.6 gi|568163403|ref|YP_008946748.1| - 5.3e-05 23.8 2.5 0.13 12.7 0.3 2.4 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.6 gi|568163403|ref|YP_008946748.1| - 6.5e-05 23.5 0.1 0.79 10.3 0.0 3.0 2 1 0 2 2 2 2 AAA domain AAA_16 PF13191.6 gi|568163403|ref|YP_008946748.1| - 0.00011 22.6 0.0 0.02 15.3 0.0 2.5 2 0 0 2 2 2 1 AAA ATPase domain Rad17 PF03215.15 gi|568163403|ref|YP_008946748.1| - 0.00022 21.2 0.0 0.32 10.9 0.0 2.4 2 0 0 2 2 2 2 Rad17 P-loop domain Fer4_6 PF12837.7 gi|568163403|ref|YP_008946748.1| - 0.00044 20.2 12.9 0.0015 18.5 3.4 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain RNA_helicase PF00910.22 gi|568163403|ref|YP_008946748.1| - 0.00066 20.0 0.0 0.24 11.8 0.0 2.5 2 0 0 2 2 2 1 RNA helicase Fer4_2 PF12797.7 gi|568163403|ref|YP_008946748.1| - 0.00067 19.6 1.2 0.00067 19.6 1.2 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain AAA_15 PF13175.6 gi|568163403|ref|YP_008946748.1| - 0.00074 19.3 9.7 0.45 10.2 0.1 3.9 3 1 0 4 4 4 2 AAA ATPase domain Fer4_21 PF14697.6 gi|568163403|ref|YP_008946748.1| - 0.00077 19.5 8.3 0.0014 18.7 8.3 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|568163403|ref|YP_008946748.1| - 0.00089 19.8 0.7 0.00089 19.8 0.7 2.2 1 1 2 3 3 3 2 4Fe-4S dicluster domain AAA_33 PF13671.6 gi|568163403|ref|YP_008946748.1| - 0.0013 18.9 0.0 0.57 10.3 0.0 2.9 2 1 0 2 2 2 1 AAA domain Fer4_9 PF13187.6 gi|568163403|ref|YP_008946748.1| - 0.0015 18.6 6.8 0.0028 17.8 6.8 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain AAA_24 PF13479.6 gi|568163403|ref|YP_008946748.1| - 0.0018 18.0 0.0 0.094 12.4 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|568163403|ref|YP_008946748.1| - 0.0038 16.9 1.8 1.8 8.4 0.5 2.5 2 0 0 2 2 2 1 P-loop containing region of AAA domain Fer4_16 PF13484.6 gi|568163403|ref|YP_008946748.1| - 0.0038 18.1 4.0 0.0086 17.0 0.1 2.4 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain AAA PF00004.29 gi|568163403|ref|YP_008946748.1| - 0.0086 16.5 0.0 0.28 11.6 0.0 2.7 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 gi|568163403|ref|YP_008946748.1| - 0.011 15.7 0.1 0.043 13.7 0.0 2.0 3 0 0 3 3 2 0 NACHT domain AAA_28 PF13521.6 gi|568163403|ref|YP_008946748.1| - 0.015 15.5 0.0 5.7 7.2 0.0 2.5 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 gi|568163403|ref|YP_008946748.1| - 0.016 15.0 0.0 0.19 11.4 0.0 2.5 2 1 0 2 2 2 0 AAA domain AAA_22 PF13401.6 gi|568163403|ref|YP_008946748.1| - 0.017 15.4 0.5 0.27 11.5 0.0 2.7 2 2 0 2 2 2 0 AAA domain CLP1_P PF16575.5 gi|568163403|ref|YP_008946748.1| - 0.024 14.4 0.0 4.6 7.0 0.0 2.4 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop PRK PF00485.18 gi|568163403|ref|YP_008946748.1| - 0.028 14.2 0.0 0.99 9.1 0.0 2.3 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family NB-ARC PF00931.22 gi|568163403|ref|YP_008946748.1| - 0.051 12.8 0.3 0.33 10.1 0.0 2.1 2 0 0 2 2 2 0 NB-ARC domain MobB PF03205.14 gi|568163403|ref|YP_008946748.1| - 0.067 13.1 0.4 1.1 9.2 0.0 2.3 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_13 PF13166.6 gi|568163403|ref|YP_008946748.1| - 0.089 11.4 1.4 12 4.4 0.0 3.0 3 0 0 3 3 3 0 AAA domain T2SSE PF00437.20 gi|568163403|ref|YP_008946748.1| - 0.12 11.4 0.1 1.4 7.9 0.0 2.2 2 0 0 2 2 2 0 Type II/IV secretion system protein Fer4_8 PF13183.6 gi|568163403|ref|YP_008946748.1| - 0.15 12.5 0.1 0.15 12.5 0.1 1.8 2 0 0 2 2 1 0 4Fe-4S dicluster domain RsgA_GTPase PF03193.16 gi|568163403|ref|YP_008946748.1| - 0.21 11.5 3.5 2 8.3 0.0 3.0 2 1 1 3 3 3 0 RsgA GTPase Fer4_4 PF12800.7 gi|568163403|ref|YP_008946748.1| - 0.27 11.8 10.9 0.16 12.6 2.3 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|568163403|ref|YP_008946748.1| - 1.3 9.6 6.4 0.27 11.8 1.4 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain ATPase_2 PF01637.18 gi|568163403|ref|YP_008946748.1| - 4.4 7.2 7.4 1.2 9.0 0.5 2.9 2 2 0 2 2 2 0 ATPase domain predominantly from Archaea Fer4_3 PF12798.7 gi|568163403|ref|YP_008946748.1| - 6 8.1 11.4 0.5 11.4 2.5 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain MFS_1 PF07690.16 gi|568163405|ref|YP_008946750.1| - 1e-28 100.3 67.7 2.3e-22 79.4 42.0 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|568163405|ref|YP_008946750.1| - 5.7e-22 78.2 37.6 3.3e-16 59.2 12.1 2.0 1 1 1 2 2 2 2 Sugar (and other) transporter DUF5516 PF17637.2 gi|568163405|ref|YP_008946750.1| - 1.4 8.7 6.0 14 5.5 0.2 3.5 4 0 0 4 4 4 0 Family of unknown function (DUF5516) Ribosomal_S10 PF00338.22 gi|568163406|ref|YP_008946751.1| - 8.1e-28 96.5 0.1 9.1e-28 96.4 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e GTP_EFTU PF00009.27 gi|568163407|ref|YP_008946752.1| - 5e-54 182.8 0.1 6.6e-54 182.4 0.1 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 gi|568163407|ref|YP_008946752.1| - 6.1e-36 123.1 0.1 1.4e-35 121.9 0.1 1.7 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 gi|568163407|ref|YP_008946752.1| - 1.4e-17 63.9 5.5 2.1e-16 60.1 3.5 2.7 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|568163407|ref|YP_008946752.1| - 4.2e-06 26.8 0.1 2.9e-05 24.1 0.0 2.4 1 1 1 2 2 2 1 50S ribosome-binding GTPase GTP_EFTU_D4 PF14578.6 gi|568163407|ref|YP_008946752.1| - 0.00031 20.6 3.2 0.00031 20.6 3.2 2.1 2 0 0 2 2 2 1 Elongation factor Tu domain 4 SRPRB PF09439.10 gi|568163407|ref|YP_008946752.1| - 0.0014 18.1 0.1 0.8 9.1 0.0 2.3 1 1 1 2 2 2 2 Signal recognition particle receptor beta subunit Septin PF00735.18 gi|568163407|ref|YP_008946752.1| - 0.0044 16.3 0.1 0.018 14.4 0.1 1.9 1 1 0 1 1 1 1 Septin Gtr1_RagA PF04670.12 gi|568163407|ref|YP_008946752.1| - 0.017 14.5 0.1 0.027 13.8 0.1 1.3 1 0 0 1 1 1 0 Gtr1/RagA G protein conserved region cobW PF02492.19 gi|568163407|ref|YP_008946752.1| - 0.057 13.0 0.3 0.39 10.3 0.1 2.1 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain SepF PF04472.12 gi|568163407|ref|YP_008946752.1| - 0.057 13.7 1.5 5.5 7.3 0.0 3.2 4 0 0 4 4 4 0 Cell division protein SepF Dynamin_N PF00350.23 gi|568163407|ref|YP_008946752.1| - 0.08 13.0 0.0 2.3 8.3 0.0 2.4 1 1 1 2 2 2 0 Dynamin family Ribosomal_S7 PF00177.21 gi|568163408|ref|YP_008946753.1| - 3.6e-44 150.0 1.1 4.5e-44 149.7 1.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e DNase-RNase PF02577.14 gi|568163409|ref|YP_008946754.1| - 1.1e-05 25.1 0.3 1.6e-05 24.6 0.3 1.2 1 0 0 1 1 1 1 Bifunctional nuclease Ribosom_S12_S23 PF00164.25 gi|568163410|ref|YP_008946755.1| - 5.8e-48 161.2 0.2 7.2e-48 160.9 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein S12/S23 KH_2 PF07650.17 gi|568163411|ref|YP_008946756.1| - 4.4e-20 71.3 4.7 5.8e-14 51.7 0.4 2.1 1 1 1 2 2 2 2 KH domain KH_5 PF13184.6 gi|568163411|ref|YP_008946756.1| - 4.5e-12 45.9 3.7 3.6e-11 43.0 0.8 2.2 2 0 0 2 2 2 1 NusA-like KH domain KH_4 PF13083.6 gi|568163411|ref|YP_008946756.1| - 1.1e-11 44.4 1.3 3e-06 27.0 0.2 2.1 2 0 0 2 2 2 2 KH domain KH_1 PF00013.29 gi|568163411|ref|YP_008946756.1| - 0.012 15.4 4.3 0.24 11.2 0.2 2.7 1 1 0 2 2 2 0 KH domain HTH_ParB PF17762.1 gi|568163411|ref|YP_008946756.1| - 0.037 13.8 0.0 0.083 12.7 0.0 1.7 1 0 0 1 1 1 0 HTH domain found in ParB protein Ribosomal_L7Ae PF01248.26 gi|568163412|ref|YP_008946757.1| - 1.4e-19 69.6 0.0 1.6e-19 69.4 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family RNA_pol_Rpb1_5 PF04998.17 gi|568163413|ref|YP_008946758.1| - 5.1e-57 193.3 4.1 8.6e-57 192.6 4.1 1.3 1 1 0 1 1 1 1 RNA polymerase Rpb1, domain 5 SWM_repeat PF13753.6 gi|568163413|ref|YP_008946758.1| - 0.11 12.7 0.1 0.65 10.2 0.1 2.3 2 0 0 2 2 2 0 Putative flagellar system-associated repeat DUF3052 PF11253.8 gi|568163413|ref|YP_008946758.1| - 0.45 10.5 2.8 0.31 11.0 0.4 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3052) RNA_pol_Rpb1_1 PF04997.12 gi|568163414|ref|YP_008946759.1| - 2.5e-100 335.9 0.0 3.3e-100 335.4 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.20 gi|568163414|ref|YP_008946759.1| - 1.8e-74 249.5 0.0 3.2e-74 248.7 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_3 PF04983.18 gi|568163414|ref|YP_008946759.1| - 2.6e-33 115.2 0.0 4.4e-33 114.4 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_4 PF05000.17 gi|568163414|ref|YP_008946759.1| - 4.1e-29 100.7 0.0 8.3e-29 99.7 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 RNA_pol_Rpb1_5 PF04998.17 gi|568163414|ref|YP_008946759.1| - 6.4e-25 88.1 0.0 1.4e-24 86.9 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 zf-ribbon_3 PF13248.6 gi|568163414|ref|YP_008946759.1| - 0.027 13.9 7.0 7.5 6.1 0.3 3.6 3 0 0 3 3 3 0 zinc-ribbon domain HTH_17 PF12728.7 gi|568163414|ref|YP_008946759.1| - 0.12 12.6 1.5 2.6 8.3 0.1 2.8 2 0 0 2 2 2 0 Helix-turn-helix domain DZR PF12773.7 gi|568163414|ref|YP_008946759.1| - 0.21 11.6 0.6 3.7 7.7 0.2 2.3 2 0 0 2 2 2 0 Double zinc ribbon zf-ZPR1 PF03367.13 gi|568163414|ref|YP_008946759.1| - 0.21 11.4 0.1 1.2 9.0 0.0 2.3 2 0 0 2 2 2 0 ZPR1 zinc-finger domain Rad50_zn_hook PF04423.14 gi|568163414|ref|YP_008946759.1| - 0.38 10.6 2.0 8.5 6.3 0.1 3.1 2 0 0 2 2 2 0 Rad50 zinc hook motif Zn-ribbon_8 PF09723.10 gi|568163414|ref|YP_008946759.1| - 0.47 10.6 1.7 24 5.1 0.0 3.0 3 0 0 3 3 3 0 Zinc ribbon domain CpXC PF14353.6 gi|568163414|ref|YP_008946759.1| - 0.53 10.3 2.2 0.98 9.5 0.0 2.5 1 1 1 2 2 2 0 CpXC protein zinc_ribbon_2 PF13240.6 gi|568163414|ref|YP_008946759.1| - 5 7.0 8.3 8.2 6.3 0.2 3.1 3 0 0 3 3 3 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|568163414|ref|YP_008946759.1| - 5.1 7.2 7.1 9.1 6.4 0.0 3.2 3 0 0 3 3 3 0 Transposase zinc-ribbon domain zf-FPG_IleRS PF06827.14 gi|568163414|ref|YP_008946759.1| - 7.3 6.6 8.9 0.47 10.4 0.1 3.2 3 0 0 3 3 3 0 Zinc finger found in FPG and IleRS RNA_pol_Rpb2_6 PF00562.28 gi|568163415|ref|YP_008946760.1| - 5.6e-127 424.0 0.2 8e-127 423.5 0.2 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_1 PF04563.15 gi|568163415|ref|YP_008946760.1| - 1.1e-57 194.8 0.0 1.6e-57 194.3 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_2 PF04561.14 gi|568163415|ref|YP_008946760.1| - 3.8e-44 150.6 0.0 6.8e-44 149.8 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb2_7 PF04560.20 gi|568163415|ref|YP_008946760.1| - 1.8e-29 101.9 0.0 4.5e-29 100.7 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_3 PF04565.16 gi|568163415|ref|YP_008946760.1| - 5.8e-25 87.3 0.0 1.3e-24 86.1 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb2_4 PF04566.13 gi|568163415|ref|YP_008946760.1| - 4.7e-22 78.0 0.2 1.3e-21 76.7 0.2 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 4 RNA_pol_Rpb2_5 PF04567.17 gi|568163415|ref|YP_008946760.1| - 5.8e-10 39.6 0.0 1.5e-09 38.2 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 5 RNA_pol_Rpb5_C PF01191.19 gi|568163416|ref|YP_008946761.1| - 1e-31 108.6 0.1 1.2e-31 108.4 0.1 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain GTP_EFTU_D4 PF14578.6 gi|568163417|ref|YP_008946762.1| - 5.3e-37 125.6 5.4 2.1e-36 123.7 5.4 2.1 1 0 0 1 1 1 1 Elongation factor Tu domain 4 GTP_EFTU PF00009.27 gi|568163417|ref|YP_008946762.1| - 2.5e-34 118.5 0.1 6e-34 117.3 0.1 1.5 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain IF-2 PF11987.8 gi|568163417|ref|YP_008946762.1| - 1.4e-14 54.0 2.0 4.2e-14 52.5 2.0 1.9 1 0 0 1 1 1 1 Translation-initiation factor 2 GTP_EFTU_D2 PF03144.25 gi|568163417|ref|YP_008946762.1| - 1.1e-10 41.8 1.4 9e-10 38.8 0.1 2.8 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|568163417|ref|YP_008946762.1| - 2e-07 31.1 0.5 1.1e-06 28.7 0.1 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase Roc PF08477.13 gi|568163417|ref|YP_008946762.1| - 4.7e-05 23.6 0.0 0.00012 22.2 0.0 1.8 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 gi|568163417|ref|YP_008946762.1| - 0.00089 18.9 0.2 0.0073 15.9 0.1 2.7 2 1 0 2 2 2 1 Ras family Arf PF00025.21 gi|568163417|ref|YP_008946762.1| - 0.0022 17.5 0.5 2 7.9 0.0 3.0 2 1 0 2 2 2 2 ADP-ribosylation factor family Dynamin_N PF00350.23 gi|568163417|ref|YP_008946762.1| - 0.0026 17.8 0.4 0.073 13.1 0.0 2.9 3 1 0 3 3 3 1 Dynamin family ATP_bind_1 PF03029.17 gi|568163417|ref|YP_008946762.1| - 0.0085 15.9 0.0 0.041 13.7 0.0 2.1 1 1 1 2 2 2 1 Conserved hypothetical ATP binding protein PduV-EutP PF10662.9 gi|568163417|ref|YP_008946762.1| - 0.061 13.1 0.5 2 8.1 0.0 3.5 4 1 0 5 5 5 0 Ethanolamine utilisation - propanediol utilisation JLPA PF16668.5 gi|568163417|ref|YP_008946762.1| - 0.093 11.8 0.1 0.093 11.8 0.1 1.9 2 0 0 2 2 2 0 Adhesin from Campylobacter SRPRB PF09439.10 gi|568163417|ref|YP_008946762.1| - 0.17 11.3 1.4 0.45 9.9 0.3 2.4 2 1 0 2 2 2 0 Signal recognition particle receptor beta subunit RsgA_GTPase PF03193.16 gi|568163417|ref|YP_008946762.1| - 0.22 11.4 4.5 1.9 8.3 0.1 3.6 2 1 2 4 4 4 0 RsgA GTPase AAA_23 PF13476.6 gi|568163417|ref|YP_008946762.1| - 2 8.9 5.4 0.47 10.9 0.1 2.4 2 2 0 2 2 2 0 AAA domain NDK PF00334.19 gi|568163418|ref|YP_008946763.1| - 1.9e-57 193.0 0.1 2.3e-57 192.8 0.1 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase Ribosomal_L24e PF01246.20 gi|568163419|ref|YP_008946764.1| - 1.2e-22 79.9 0.4 1.3e-22 79.7 0.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L24e zf-FCS PF06467.14 gi|568163419|ref|YP_008946764.1| - 6.7e-07 29.1 1.7 1.1e-06 28.5 1.7 1.3 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif zf-FLZ PF04570.14 gi|568163419|ref|YP_008946764.1| - 0.00022 20.7 0.7 0.00042 19.7 0.7 1.4 1 1 0 1 1 1 1 zinc-finger of the FCS-type, C2-C2 YHS PF04945.13 gi|568163419|ref|YP_008946764.1| - 0.0014 18.7 0.0 0.0027 17.8 0.0 1.5 1 1 1 2 2 2 1 YHS domain zf-MYND PF01753.18 gi|568163419|ref|YP_008946764.1| - 0.003 17.6 0.0 0.0051 16.9 0.0 1.3 1 1 0 1 1 1 1 MYND finger HZS_alpha PF18582.1 gi|568163419|ref|YP_008946764.1| - 0.017 15.6 0.0 0.017 15.5 0.0 1.1 1 0 0 1 1 1 0 Hydrazine synthase alpha subunit middle domain DUF3268 PF11672.8 gi|568163419|ref|YP_008946764.1| - 0.039 14.3 0.0 0.043 14.2 0.0 1.1 1 0 0 1 1 1 0 zinc-finger-containing domain VATC PF18716.1 gi|568163419|ref|YP_008946764.1| - 0.048 13.5 3.3 0.27 11.1 3.3 2.0 1 1 0 1 1 1 0 Vms1-associating treble clef domain DUF2175 PF09943.9 gi|568163419|ref|YP_008946764.1| - 0.1 12.9 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2175) Ribosomal_S28e PF01200.18 gi|568163420|ref|YP_008946765.1| - 1.4e-31 108.2 2.3 1.7e-31 108.0 2.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S28e KOW PF00467.29 gi|568163420|ref|YP_008946765.1| - 0.24 11.4 2.4 0.64 10.1 0.1 2.3 2 1 0 2 2 2 0 KOW motif UPRTase PF14681.6 gi|568163421|ref|YP_008946766.1| - 1.7e-53 181.1 0.0 2e-53 180.9 0.0 1.0 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase Pribosyltran PF00156.27 gi|568163421|ref|YP_008946766.1| - 1.1e-11 44.6 0.1 1.4e-11 44.2 0.1 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.6 gi|568163421|ref|YP_008946766.1| - 0.083 12.4 0.0 0.13 11.8 0.0 1.4 1 1 0 1 1 1 0 Phosphoribosyl transferase GatB_N PF02934.15 gi|568163422|ref|YP_008946767.1| - 4.5e-97 324.7 0.0 6.5e-97 324.2 0.0 1.2 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.18 gi|568163422|ref|YP_008946767.1| - 3.8e-40 137.2 6.9 3.8e-40 137.2 6.9 2.2 2 0 0 2 2 2 1 GatB domain Med7 PF05983.11 gi|568163422|ref|YP_008946767.1| - 0.005 16.9 1.0 0.0093 16.1 1.0 1.3 1 0 0 1 1 1 1 MED7 protein Pribosyltran PF00156.27 gi|568163423|ref|YP_008946768.1| - 2.3e-16 59.7 0.1 3.9e-16 59.0 0.1 1.4 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|568163423|ref|YP_008946768.1| - 0.052 13.0 0.0 0.077 12.4 0.0 1.3 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase HTH_Tnp_4 PF13613.6 gi|568163423|ref|YP_008946768.1| - 0.14 11.9 0.0 0.32 10.8 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease Radical_SAM PF04055.21 gi|568163424|ref|YP_008946770.1| - 1.9e-20 73.9 0.1 1.9e-20 73.9 0.1 1.9 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|568163424|ref|YP_008946770.1| - 5.9e-06 26.4 1.3 1.4e-05 25.2 0.0 2.2 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|568163424|ref|YP_008946770.1| - 6.8e-06 26.4 0.7 1.3e-05 25.5 0.0 1.9 1 1 1 2 2 2 1 4Fe-4S single cluster domain Peptidase_S13 PF02113.15 gi|568163424|ref|YP_008946770.1| - 0.051 12.3 0.0 0.22 10.2 0.0 1.9 3 0 0 3 3 3 0 D-Ala-D-Ala carboxypeptidase 3 (S13) family HMGL-like PF00682.19 gi|568163424|ref|YP_008946770.1| - 0.1 12.1 0.0 0.24 10.9 0.0 1.5 2 0 0 2 2 2 0 HMGL-like AIRS PF00586.24 gi|568163425|ref|YP_008946771.1| - 3.9e-12 46.7 0.0 8.3e-12 45.6 0.0 1.5 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.22 gi|568163425|ref|YP_008946771.1| - 0.00054 20.1 0.0 0.0008 19.6 0.0 1.2 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain Lyase_1 PF00206.20 gi|568163426|ref|YP_008946772.1| - 1.2e-48 166.2 0.0 1.8e-48 165.6 0.0 1.3 1 0 0 1 1 1 1 Lyase ADSL_C PF10397.9 gi|568163426|ref|YP_008946772.1| - 1.2e-13 51.4 0.0 3.7e-13 49.8 0.0 1.9 1 0 0 1 1 1 1 Adenylosuccinate lyase C-terminus ASL_C PF08328.11 gi|568163426|ref|YP_008946772.1| - 7.8e-06 26.0 0.7 7.8e-06 26.0 0.7 1.9 2 0 0 2 2 2 1 Adenylosuccinate lyase C-terminal DUF1297 PF06973.12 gi|568163427|ref|YP_008946773.1| - 5.9e-72 241.2 0.0 8.3e-72 240.7 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.12 gi|568163427|ref|YP_008946773.1| - 9.5e-39 132.1 0.0 1.4e-38 131.6 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) GARS_A PF01071.19 gi|568163427|ref|YP_008946773.1| - 0.051 13.3 0.0 0.1 12.4 0.0 1.5 1 0 0 1 1 1 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp PF02222.22 gi|568163427|ref|YP_008946773.1| - 0.099 12.2 0.3 3 7.4 0.1 2.1 2 0 0 2 2 2 0 ATP-grasp domain DUF1297 PF06973.12 gi|568163428|ref|YP_008946774.1| - 1e-80 269.7 0.0 1.3e-80 269.3 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.12 gi|568163428|ref|YP_008946774.1| - 1.1e-46 157.7 0.0 1.6e-46 157.2 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) DUF4756 PF15948.5 gi|568163428|ref|YP_008946774.1| - 0.041 13.7 0.1 0.1 12.4 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4756) Adenylsucc_synt PF00709.21 gi|568163429|ref|YP_008946775.1| - 1.2e-68 232.0 0.6 1.3e-35 123.1 0.0 3.0 1 1 2 3 3 3 3 Adenylosuccinate synthetase Pyr_redox_2 PF07992.14 gi|568163430|ref|YP_008946776.1| - 2e-15 56.8 0.1 6.4e-05 22.3 0.0 3.1 3 0 0 3 3 3 3 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|568163430|ref|YP_008946776.1| - 1.3e-09 37.8 0.4 0.00092 18.6 0.1 3.1 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|568163430|ref|YP_008946776.1| - 1.5e-09 37.1 0.0 8.5e-05 21.4 0.0 2.3 2 0 0 2 2 2 2 HI0933-like protein GIDA PF01134.22 gi|568163430|ref|YP_008946776.1| - 4.9e-09 35.7 1.1 6.7e-05 22.1 0.0 2.9 3 0 0 3 3 3 2 Glucose inhibited division protein A DAO PF01266.24 gi|568163430|ref|YP_008946776.1| - 8.6e-06 25.6 0.1 0.002 17.8 0.0 2.6 3 1 0 3 3 3 1 FAD dependent oxidoreductase Pyr_redox PF00070.27 gi|568163430|ref|YP_008946776.1| - 0.0001 22.8 0.1 1.5 9.4 0.1 3.4 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 gi|568163430|ref|YP_008946776.1| - 0.00012 21.3 0.0 0.00037 19.7 0.0 1.7 2 0 0 2 2 2 1 Lycopene cyclase protein Thi4 PF01946.17 gi|568163430|ref|YP_008946776.1| - 0.00026 20.3 0.2 0.0019 17.5 0.0 2.2 2 0 0 2 2 2 1 Thi4 family FAD_binding_2 PF00890.24 gi|568163430|ref|YP_008946776.1| - 0.00043 19.5 0.7 0.0014 17.8 0.0 2.1 3 0 0 3 3 3 1 FAD binding domain NAD_binding_8 PF13450.6 gi|568163430|ref|YP_008946776.1| - 0.00046 20.4 0.0 0.002 18.3 0.0 2.1 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain NAD_binding_9 PF13454.6 gi|568163430|ref|YP_008946776.1| - 0.0023 17.9 0.0 0.061 13.3 0.0 2.2 2 0 0 2 2 2 1 FAD-NAD(P)-binding FAD_binding_3 PF01494.19 gi|568163430|ref|YP_008946776.1| - 0.011 15.0 0.0 0.031 13.5 0.0 1.7 2 0 0 2 2 2 0 FAD binding domain Trp_halogenase PF04820.14 gi|568163430|ref|YP_008946776.1| - 0.067 12.0 0.0 0.17 10.7 0.0 1.6 2 0 0 2 2 2 0 Tryptophan halogenase GDC-P PF02347.16 gi|568163430|ref|YP_008946776.1| - 0.12 11.2 0.0 0.19 10.5 0.0 1.2 1 0 0 1 1 1 0 Glycine cleavage system P-protein AsnC_trans_reg2 PF17805.1 gi|568163431|ref|YP_008946777.1| - 1.2e-28 99.1 4.9 4.6e-15 55.5 0.1 2.9 4 0 0 4 4 4 2 AsnC-like ligand binding domain HTH_AsnC-type PF13404.6 gi|568163431|ref|YP_008946777.1| - 3.3e-10 39.6 0.0 1e-08 34.9 0.0 2.3 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|568163431|ref|YP_008946777.1| - 0.00012 21.5 3.4 0.042 13.4 0.1 2.8 3 0 0 3 3 3 2 Winged helix-turn-helix DNA-binding DUF2805 PF10985.8 gi|568163431|ref|YP_008946777.1| - 0.00013 22.3 0.3 0.026 14.9 0.1 2.5 2 0 0 2 2 2 1 Protein of unknown function (DUF2805) Sigma70_r4 PF04545.16 gi|568163431|ref|YP_008946777.1| - 0.00093 18.7 0.0 0.031 13.8 0.0 2.5 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_11 PF08279.12 gi|568163431|ref|YP_008946777.1| - 0.0075 16.2 0.1 4.6 7.3 0.0 2.7 2 0 0 2 2 2 2 HTH domain MarR PF01047.22 gi|568163431|ref|YP_008946777.1| - 0.02 14.8 0.1 3 7.8 0.0 2.7 2 0 0 2 2 2 0 MarR family Peptidase_C71 PF12386.8 gi|568163431|ref|YP_008946777.1| - 0.05 13.2 0.2 0.13 11.9 0.2 1.7 1 0 0 1 1 1 0 Pseudomurein endo-isopeptidase Pei Aldo_ket_red PF00248.21 gi|568163431|ref|YP_008946777.1| - 0.054 12.7 0.1 0.99 8.5 0.0 2.2 2 0 0 2 2 2 0 Aldo/keto reductase family RelE PF06296.12 gi|568163431|ref|YP_008946777.1| - 0.068 13.3 0.3 0.27 11.4 0.1 2.1 3 0 0 3 3 3 0 RelE toxin of RelE / RelB toxin-antitoxin system HTH_27 PF13463.6 gi|568163431|ref|YP_008946777.1| - 0.069 13.6 0.0 0.27 11.7 0.0 1.9 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 gi|568163431|ref|YP_008946777.1| - 0.16 12.0 0.2 9.1 6.3 0.0 2.4 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain PDT PF00800.18 gi|568163432|ref|YP_008946778.1| - 1.2e-31 109.9 1.7 1.5e-31 109.6 1.7 1.1 1 0 0 1 1 1 1 Prephenate dehydratase ACT PF01842.25 gi|568163432|ref|YP_008946778.1| - 7.7e-06 25.6 0.0 2.3e-05 24.0 0.0 1.9 2 0 0 2 2 2 1 ACT domain PALP PF00291.25 gi|568163433|ref|YP_008946779.1| - 6.5e-77 258.8 0.6 7.7e-77 258.6 0.6 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme ACT PF01842.25 gi|568163433|ref|YP_008946779.1| - 0.00055 19.6 0.9 0.0022 17.7 0.1 2.4 2 0 0 2 2 2 1 ACT domain ACT_6 PF13740.6 gi|568163433|ref|YP_008946779.1| - 0.019 15.0 0.0 0.051 13.6 0.0 1.7 1 0 0 1 1 1 0 ACT domain ACT_4 PF13291.6 gi|568163433|ref|YP_008946779.1| - 0.06 14.0 0.0 0.18 12.4 0.0 1.8 1 0 0 1 1 1 0 ACT domain HIT PF01230.23 gi|568163434|ref|YP_008946780.1| - 9.1e-15 55.2 0.0 1.2e-14 54.8 0.0 1.2 1 0 0 1 1 1 1 HIT domain CwfJ_C_1 PF04677.15 gi|568163434|ref|YP_008946780.1| - 2.9e-08 33.6 0.2 5.9e-08 32.6 0.2 1.5 1 1 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 DcpS_C PF11969.8 gi|568163434|ref|YP_008946780.1| - 8.9e-06 26.2 0.0 1.4e-05 25.5 0.0 1.2 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding GalP_UDP_tr_C PF02744.17 gi|568163434|ref|YP_008946780.1| - 0.0043 16.8 0.0 0.0052 16.5 0.0 1.1 1 0 0 1 1 1 1 Galactose-1-phosphate uridyl transferase, C-terminal domain COMM_domain PF07258.14 gi|568163434|ref|YP_008946780.1| - 0.031 14.4 0.0 0.064 13.4 0.0 1.4 1 0 0 1 1 1 0 COMM domain Rad51 PF08423.11 gi|568163435|ref|YP_008946781.1| - 3.7e-90 301.6 0.1 4.4e-90 301.4 0.1 1.1 1 0 0 1 1 1 1 Rad51 RecA PF00154.21 gi|568163435|ref|YP_008946781.1| - 3.2e-15 56.3 0.4 4.7e-15 55.8 0.4 1.3 1 0 0 1 1 1 1 recA bacterial DNA recombination protein HHH_5 PF14520.6 gi|568163435|ref|YP_008946781.1| - 8.7e-12 45.5 0.3 4e-11 43.4 0.1 2.2 2 0 0 2 2 2 1 Helix-hairpin-helix domain ATPase PF06745.13 gi|568163435|ref|YP_008946781.1| - 4.2e-09 36.1 0.8 1e-08 34.9 0.8 1.6 1 1 0 1 1 1 1 KaiC AAA_25 PF13481.6 gi|568163435|ref|YP_008946781.1| - 2.1e-08 34.0 0.0 3.5e-08 33.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|568163435|ref|YP_008946781.1| - 0.0034 17.1 0.0 0.012 15.3 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|568163435|ref|YP_008946781.1| - 0.0062 17.1 0.0 0.012 16.2 0.0 1.5 1 0 0 1 1 1 1 AAA domain Cdd1 PF11731.8 gi|568163435|ref|YP_008946781.1| - 0.026 14.8 0.0 0.056 13.7 0.0 1.6 1 0 0 1 1 1 0 Pathogenicity locus Bac_DnaA PF00308.18 gi|568163435|ref|YP_008946781.1| - 0.031 14.1 0.0 0.06 13.2 0.0 1.4 1 0 0 1 1 1 0 Bacterial dnaA protein AAA_22 PF13401.6 gi|568163435|ref|YP_008946781.1| - 0.038 14.3 0.1 0.12 12.6 0.1 1.9 1 1 0 1 1 1 0 AAA domain HHH_2 PF12826.7 gi|568163435|ref|YP_008946781.1| - 0.074 13.2 0.1 0.22 11.7 0.1 1.8 1 0 0 1 1 1 0 Helix-hairpin-helix motif MarR_2 PF12802.7 gi|568163435|ref|YP_008946781.1| - 0.11 12.4 1.3 4 7.4 0.1 2.9 3 0 0 3 3 3 0 MarR family DUF3173 PF11372.8 gi|568163435|ref|YP_008946781.1| - 0.12 12.2 0.0 0.42 10.5 0.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF3173) BDV_P24 PF06595.11 gi|568163435|ref|YP_008946781.1| - 0.13 12.1 0.0 0.23 11.3 0.0 1.3 1 0 0 1 1 1 0 Borna disease virus P24 protein UPF0113 PF03657.13 gi|568163436|ref|YP_008946782.1| - 3.1e-07 30.6 0.4 7.1e-07 29.4 0.4 1.6 1 0 0 1 1 1 1 UPF0113 PUA domain Recep_L_domain PF01030.24 gi|568163436|ref|YP_008946782.1| - 0.2 11.8 4.2 2.3 8.4 4.2 2.1 1 1 0 1 1 1 0 Receptor L domain Methyltr_RsmB-F PF01189.17 gi|568163437|ref|YP_008946783.1| - 6e-54 182.7 0.0 8.8e-54 182.2 0.0 1.2 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltr_RsmF_N PF17125.5 gi|568163437|ref|YP_008946783.1| - 5e-14 52.6 0.0 1.2e-13 51.3 0.0 1.6 1 0 0 1 1 1 1 N-terminal domain of 16S rRNA methyltransferase RsmF PCMT PF01135.19 gi|568163437|ref|YP_008946783.1| - 0.00085 19.1 0.0 0.0013 18.6 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_4 PF02390.17 gi|568163437|ref|YP_008946783.1| - 0.0011 18.4 0.0 0.0021 17.6 0.0 1.4 1 0 0 1 1 1 1 Putative methyltransferase Fibrillarin PF01269.17 gi|568163437|ref|YP_008946783.1| - 0.0042 16.2 0.0 0.0063 15.6 0.0 1.3 1 0 0 1 1 1 1 Fibrillarin FtsJ PF01728.19 gi|568163437|ref|YP_008946783.1| - 0.0074 16.4 0.0 0.012 15.8 0.0 1.3 1 0 0 1 1 1 1 FtsJ-like methyltransferase RrnaAD PF00398.20 gi|568163437|ref|YP_008946783.1| - 0.096 11.7 0.0 0.16 11.0 0.0 1.3 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase CYTH PF01928.21 gi|568163438|ref|YP_008946784.1| - 9.4e-31 107.1 4.1 1.2e-30 106.8 4.1 1.0 1 0 0 1 1 1 1 CYTH domain Raptor_N PF14538.6 gi|568163438|ref|YP_008946784.1| - 0.0088 16.0 0.5 0.057 13.4 0.1 2.0 2 0 0 2 2 2 1 Raptor N-terminal CASPase like domain SAM_adeno_trans PF01887.16 gi|568163439|ref|YP_008946785.1| - 9e-72 241.3 0.1 1e-71 241.1 0.1 1.0 1 0 0 1 1 1 1 S-adenosyl-l-methionine hydroxide adenosyltransferase CTP_transf_like PF01467.26 gi|568163440|ref|YP_008946786.1| - 3.2e-17 63.1 0.1 9e-17 61.6 0.1 1.7 1 1 0 1 1 1 1 Cytidylyltransferase-like DUF99 PF01949.16 gi|568163441|ref|YP_008946787.1| - 1.2e-16 60.7 0.0 2.2e-16 59.8 0.0 1.4 1 1 0 1 1 1 1 Protein of unknown function DUF99 Cdc6_C PF09079.11 gi|568163442|ref|YP_008946788.1| - 4.5e-21 74.6 0.4 1.7e-20 72.8 0.1 2.2 3 0 0 3 3 2 1 CDC6, C terminal winged helix domain AAA_22 PF13401.6 gi|568163442|ref|YP_008946788.1| - 4.3e-13 49.7 0.2 1.5e-12 48.0 0.0 1.9 3 0 0 3 3 2 1 AAA domain AAA_16 PF13191.6 gi|568163442|ref|YP_008946788.1| - 5.4e-13 49.7 1.3 4e-11 43.6 0.1 2.8 2 1 0 2 2 2 1 AAA ATPase domain AAA PF00004.29 gi|568163442|ref|YP_008946788.1| - 2.3e-09 37.8 0.0 5.8e-09 36.5 0.0 1.7 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) TniB PF05621.11 gi|568163442|ref|YP_008946788.1| - 1.4e-07 31.1 0.0 2.3e-07 30.4 0.0 1.2 1 0 0 1 1 1 1 Bacterial TniB protein ATPase_2 PF01637.18 gi|568163442|ref|YP_008946788.1| - 1.7e-06 28.1 1.3 1.6e-05 25.0 0.2 2.2 1 1 1 2 2 2 1 ATPase domain predominantly from Archaea AAA_32 PF13654.6 gi|568163442|ref|YP_008946788.1| - 0.00095 18.1 0.2 0.032 13.0 0.0 2.1 2 0 0 2 2 2 1 AAA domain Sigma54_activat PF00158.26 gi|568163442|ref|YP_008946788.1| - 0.0021 17.8 0.0 0.0049 16.6 0.0 1.7 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_assoc_2 PF16193.5 gi|568163442|ref|YP_008946788.1| - 0.0027 18.0 0.2 0.0089 16.3 0.2 1.9 1 0 0 1 1 1 1 AAA C-terminal domain NB-ARC PF00931.22 gi|568163442|ref|YP_008946788.1| - 0.0071 15.6 0.0 0.011 14.9 0.0 1.5 1 0 0 1 1 1 1 NB-ARC domain AAA_7 PF12775.7 gi|568163442|ref|YP_008946788.1| - 0.0072 15.9 0.0 0.014 14.9 0.0 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region ResIII PF04851.15 gi|568163442|ref|YP_008946788.1| - 0.011 15.7 0.0 0.018 15.0 0.0 1.4 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit DUF815 PF05673.13 gi|568163442|ref|YP_008946788.1| - 0.012 14.8 0.0 0.021 14.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) E2F_TDP PF02319.20 gi|568163442|ref|YP_008946788.1| - 0.02 14.9 0.5 1.1 9.3 0.1 2.9 3 0 0 3 3 3 0 E2F/DP family winged-helix DNA-binding domain DEAD PF00270.29 gi|568163442|ref|YP_008946788.1| - 0.025 14.3 0.6 5.7 6.7 0.1 2.5 1 1 1 2 2 2 0 DEAD/DEAH box helicase Torsin PF06309.11 gi|568163442|ref|YP_008946788.1| - 0.037 14.1 0.0 0.069 13.2 0.0 1.4 1 0 0 1 1 1 0 Torsin TsaE PF02367.17 gi|568163442|ref|YP_008946788.1| - 0.047 13.7 0.0 0.092 12.7 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE PIF1 PF05970.14 gi|568163442|ref|YP_008946788.1| - 0.048 12.8 0.0 0.1 11.7 0.0 1.5 1 0 0 1 1 1 0 PIF1-like helicase KAP_NTPase PF07693.14 gi|568163442|ref|YP_008946788.1| - 0.08 12.2 0.2 0.91 8.7 0.0 2.1 1 1 1 2 2 2 0 KAP family P-loop domain Pox_A32 PF04665.12 gi|568163442|ref|YP_008946788.1| - 0.08 12.4 0.8 0.15 11.5 0.8 1.5 1 1 0 1 1 1 0 Poxvirus A32 protein AAA_lid_10 PF17872.1 gi|568163442|ref|YP_008946788.1| - 0.15 12.2 0.0 0.35 11.0 0.0 1.6 1 0 0 1 1 1 0 AAA lid domain DUF2075 PF09848.9 gi|568163442|ref|YP_008946788.1| - 0.17 11.1 0.0 0.23 10.7 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) MFS_1 PF07690.16 gi|568163443|ref|YP_008946789.1| - 2.9e-27 95.5 50.6 7.4e-17 61.3 26.7 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily SWIM PF04434.17 gi|568164783|ref|YP_008946790.1| - 0.00091 18.8 0.6 0.0018 17.9 0.6 1.5 1 0 0 1 1 1 1 SWIM zinc finger Elf1 PF05129.13 gi|568163444|ref|YP_008946791.1| - 6.4e-18 64.6 0.2 8e-18 64.3 0.2 1.1 1 0 0 1 1 1 1 Transcription elongation factor Elf1 like Lar_restr_allev PF14354.6 gi|568163444|ref|YP_008946791.1| - 0.0028 18.0 0.6 0.0038 17.6 0.6 1.4 1 1 0 1 1 1 1 Restriction alleviation protein Lar zf-ribbon_3 PF13248.6 gi|568163444|ref|YP_008946791.1| - 0.035 13.5 1.0 0.37 10.3 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|568163444|ref|YP_008946791.1| - 0.065 13.2 0.2 0.1 12.5 0.2 1.4 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Ribosomal_L32p PF01783.23 gi|568163444|ref|YP_008946791.1| - 0.15 12.4 1.9 0.51 10.6 1.9 1.9 1 1 0 1 1 1 0 Ribosomal L32p protein family TF_Zn_Ribbon PF08271.12 gi|568163444|ref|YP_008946791.1| - 0.15 11.6 2.2 0.26 10.9 1.9 1.6 1 1 0 1 1 1 0 TFIIB zinc-binding zinc_ribbon_4 PF13717.6 gi|568163444|ref|YP_008946791.1| - 2 8.4 5.4 21 5.2 5.4 2.2 1 1 0 1 1 1 0 zinc-ribbon domain PcrB PF01884.17 gi|568163445|ref|YP_008946792.1| - 1.5e-50 171.7 1.1 1.8e-50 171.5 1.1 1.0 1 0 0 1 1 1 1 PcrB family IMPDH PF00478.25 gi|568163445|ref|YP_008946792.1| - 3e-06 26.5 1.1 0.00031 19.9 0.5 2.2 2 0 0 2 2 2 2 IMP dehydrogenase / GMP reductase domain His_biosynth PF00977.21 gi|568163445|ref|YP_008946792.1| - 0.00052 19.5 0.3 0.00094 18.7 0.3 1.4 1 0 0 1 1 1 1 Histidine biosynthesis protein NAD_binding_7 PF13241.6 gi|568163445|ref|YP_008946792.1| - 0.013 15.9 3.0 0.017 15.5 0.5 2.2 3 0 0 3 3 3 0 Putative NAD(P)-binding NanE PF04131.14 gi|568163445|ref|YP_008946792.1| - 0.031 13.4 0.7 0.17 11.0 0.3 2.0 2 0 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase Shikimate_DH PF01488.20 gi|568163445|ref|YP_008946792.1| - 0.079 13.0 1.1 0.21 11.7 1.1 1.6 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase BON PF04972.17 gi|568163445|ref|YP_008946792.1| - 0.46 10.8 5.7 12 6.3 0.1 2.5 1 1 1 2 2 2 0 BON domain Sec61_beta PF03911.16 gi|568163446|ref|YP_008946793.1| - 3e-15 56.0 2.6 3.4e-15 55.8 2.6 1.1 1 0 0 1 1 1 1 Sec61beta family Ribo_biogen_C PF04034.13 gi|568164784|ref|YP_008946794.1| - 3.5e-36 123.7 0.0 4.2e-36 123.5 0.0 1.1 1 0 0 1 1 1 1 Ribosome biogenesis protein, C-terminal RLI PF04068.15 gi|568164784|ref|YP_008946794.1| - 1e-12 47.6 0.3 1.5e-12 47.1 0.3 1.3 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI DUF565 PF04483.12 gi|568164784|ref|YP_008946794.1| - 0.13 12.8 0.1 0.29 11.7 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF565) AsnC_trans_reg PF01037.21 gi|568163447|ref|YP_008946795.1| - 2.2e-14 53.2 0.5 2.4e-14 53.0 0.5 1.0 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain NapD PF03927.13 gi|568163447|ref|YP_008946795.1| - 0.0087 16.1 0.6 0.011 15.8 0.6 1.2 1 0 0 1 1 1 1 NapD protein DUF1743 PF08489.11 gi|568163448|ref|YP_008946796.1| - 2.9e-32 111.2 0.0 5.1e-32 110.4 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1743) OrfB_Zn_ribbon PF07282.11 gi|568163448|ref|YP_008946796.1| - 0.00073 19.4 0.4 0.0016 18.4 0.4 1.5 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Zn-ribbon_8 PF09723.10 gi|568163448|ref|YP_008946796.1| - 0.0023 18.0 0.4 1 9.5 0.2 2.5 2 0 0 2 2 2 2 Zinc ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|568163448|ref|YP_008946796.1| - 0.016 15.1 4.8 0.041 13.8 4.8 1.7 1 0 0 1 1 1 0 Transposase zinc-ribbon domain DUF2396 PF09654.10 gi|568163448|ref|YP_008946796.1| - 0.034 14.3 0.1 0.067 13.3 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2396) Cytochrome_C7 PF14522.6 gi|568163448|ref|YP_008946796.1| - 0.038 14.0 0.1 0.068 13.2 0.1 1.4 1 0 0 1 1 1 0 Cytochrome c7 and related cytochrome c zf-H2C2_2 PF13465.6 gi|568163448|ref|YP_008946796.1| - 0.18 12.3 5.7 1.1 9.9 1.0 2.5 2 0 0 2 2 2 0 Zinc-finger double domain C1_1 PF00130.22 gi|568163448|ref|YP_008946796.1| - 0.2 11.6 1.1 0.4 10.6 1.1 1.5 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) RNA_POL_M_15KD PF02150.16 gi|568163448|ref|YP_008946796.1| - 0.63 10.0 4.2 3.4 7.6 3.3 2.6 2 1 0 2 2 2 0 RNA polymerases M/15 Kd subunit zf-C2H2 PF00096.26 gi|568163448|ref|YP_008946796.1| - 3.7 8.2 5.9 8.7 7.0 1.0 2.7 2 0 0 2 2 2 0 Zinc finger, C2H2 type Rubredoxin_2 PF18073.1 gi|568163448|ref|YP_008946796.1| - 7.6 6.4 7.2 3.5 7.5 1.0 2.3 2 0 0 2 2 2 0 Rubredoxin metal binding domain DUF4898 PF16239.5 gi|568163449|ref|YP_008946797.1| - 0.044 13.7 0.1 0.056 13.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4898) NAD_binding_8 PF13450.6 gi|568164786|ref|YP_008946799.1| - 0.0033 17.6 0.0 0.011 16.0 0.0 1.9 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain zf-C2H2_4 PF13894.6 gi|568163450|ref|YP_008946801.1| - 0.77 10.8 2.6 19 6.4 0.0 2.5 2 0 0 2 2 2 0 C2H2-type zinc finger SIS PF01380.22 gi|568163451|ref|YP_008946802.1| - 2.4e-16 59.8 0.1 4.4e-16 58.9 0.1 1.4 1 0 0 1 1 1 1 SIS domain SIS_2 PF13580.6 gi|568163451|ref|YP_008946802.1| - 6.5e-06 26.2 1.0 0.0018 18.3 0.3 2.3 1 1 1 2 2 2 2 SIS domain PRMT5 PF05185.16 gi|568163451|ref|YP_008946802.1| - 0.00095 19.0 0.8 0.47 10.3 0.1 2.3 1 1 1 2 2 2 2 PRMT5 arginine-N-methyltransferase AAA_10 PF12846.7 gi|568163452|ref|YP_008946803.1| - 3.5e-12 45.9 1.2 9.7e-09 34.6 0.1 2.4 2 0 0 2 2 2 2 AAA-like domain DUF853 PF05872.12 gi|568163452|ref|YP_008946803.1| - 4.1e-06 25.7 0.0 0.045 12.4 0.0 2.1 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) DUF87 PF01935.17 gi|568163452|ref|YP_008946803.1| - 6.7e-05 23.1 2.7 6.7e-05 23.1 2.7 2.6 2 1 0 2 2 2 1 Helicase HerA, central domain FtsK_SpoIIIE PF01580.18 gi|568163452|ref|YP_008946803.1| - 0.0018 17.7 0.0 0.019 14.3 0.0 2.1 2 0 0 2 2 2 1 FtsK/SpoIIIE family T4SS-DNA_transf PF02534.14 gi|568163452|ref|YP_008946803.1| - 0.0081 15.0 0.0 0.02 13.7 0.0 1.6 2 0 0 2 2 2 1 Type IV secretory system Conjugative DNA transfer AAA_22 PF13401.6 gi|568163452|ref|YP_008946803.1| - 0.017 15.4 0.1 1.9 8.8 0.0 2.8 3 0 0 3 3 3 0 AAA domain IstB_IS21 PF01695.17 gi|568163452|ref|YP_008946803.1| - 0.075 12.8 0.0 0.45 10.2 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein TrwB_AAD_bind PF10412.9 gi|568163452|ref|YP_008946803.1| - 0.084 11.8 0.1 1.7 7.4 0.0 2.1 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain AAA_23 PF13476.6 gi|568163452|ref|YP_008946803.1| - 6 7.3 6.3 3.5 8.1 0.3 2.6 1 1 1 2 2 2 0 AAA domain DUF4795 PF16043.5 gi|568163453|ref|YP_008946804.1| - 0.26 10.9 0.2 0.26 10.9 0.2 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4795) DUF3800 PF12686.7 gi|568163453|ref|YP_008946804.1| - 0.57 10.8 2.4 0.81 10.3 2.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3800) Semialdhyde_dh PF01118.24 gi|568163454|ref|YP_008946805.1| - 4.1e-34 117.6 0.0 1.4e-33 115.9 0.0 1.8 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.18 gi|568163454|ref|YP_008946805.1| - 1.1e-07 32.2 0.0 1.5e-07 31.7 0.0 1.2 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Epimerase PF01370.21 gi|568163454|ref|YP_008946805.1| - 0.11 12.0 0.0 0.18 11.3 0.0 1.3 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family F420_oxidored PF03807.17 gi|568163454|ref|YP_008946805.1| - 0.14 12.8 0.0 0.38 11.4 0.0 1.8 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Sacchrp_dh_NADP PF03435.18 gi|568163454|ref|YP_008946805.1| - 0.2 11.9 0.0 0.33 11.2 0.0 1.5 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain AA_kinase PF00696.28 gi|568163455|ref|YP_008946806.1| - 1.7e-29 103.1 2.3 2e-29 102.9 2.3 1.0 1 0 0 1 1 1 1 Amino acid kinase family ATLF PF07737.11 gi|568163455|ref|YP_008946806.1| - 0.061 12.6 1.8 0.34 10.2 0.4 2.3 2 1 0 2 2 2 0 Anthrax toxin lethal factor, N- and C-terminal domain HTH_24 PF13412.6 gi|568163456|ref|YP_008946807.1| - 2.6e-13 49.3 1.1 2.1e-12 46.4 0.3 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding AsnC_trans_reg PF01037.21 gi|568163456|ref|YP_008946807.1| - 4.5e-13 49.0 0.0 6.9e-13 48.4 0.0 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_AsnC-type PF13404.6 gi|568163456|ref|YP_008946807.1| - 5.3e-13 48.6 0.0 1.8e-12 46.9 0.1 1.8 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.12 gi|568163456|ref|YP_008946807.1| - 6.2e-06 26.1 1.9 1.1e-05 25.3 0.2 2.2 3 0 0 3 3 3 1 HTH domain MarR_2 PF12802.7 gi|568163456|ref|YP_008946807.1| - 0.00037 20.3 0.0 0.00061 19.6 0.0 1.4 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|568163456|ref|YP_008946807.1| - 0.0015 18.4 0.1 0.0059 16.5 0.1 1.9 2 0 0 2 2 2 1 MarR family HTH_Mga PF08280.11 gi|568163456|ref|YP_008946807.1| - 0.0033 17.4 0.1 0.0086 16.1 0.0 1.7 1 1 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain NapD PF03927.13 gi|568163456|ref|YP_008946807.1| - 0.0048 16.9 0.2 0.0082 16.2 0.2 1.4 1 0 0 1 1 1 1 NapD protein HTH_20 PF12840.7 gi|568163456|ref|YP_008946807.1| - 0.0053 16.8 0.0 0.008 16.2 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain DUF2250 PF10007.9 gi|568163456|ref|YP_008946807.1| - 0.006 16.7 0.1 0.012 15.8 0.1 1.4 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_DeoR PF08220.12 gi|568163456|ref|YP_008946807.1| - 0.0066 16.2 0.2 0.012 15.3 0.2 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain TrmB PF01978.19 gi|568163456|ref|YP_008946807.1| - 0.0072 16.2 0.1 0.014 15.2 0.1 1.5 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_IclR PF09339.10 gi|568163456|ref|YP_008946807.1| - 0.0087 15.8 0.1 0.017 14.9 0.0 1.4 2 0 0 2 2 1 1 IclR helix-turn-helix domain HTH_5 PF01022.20 gi|568163456|ref|YP_008946807.1| - 0.012 15.5 0.0 0.018 14.9 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family Rio2_N PF09202.11 gi|568163456|ref|YP_008946807.1| - 0.012 15.8 0.0 0.2 11.9 0.1 2.2 2 0 0 2 2 2 0 Rio2, N-terminal HTH_27 PF13463.6 gi|568163456|ref|YP_008946807.1| - 0.016 15.7 0.1 0.025 15.1 0.1 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_9 PF08221.11 gi|568163456|ref|YP_008946807.1| - 0.016 15.3 0.1 0.031 14.4 0.1 1.5 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain DUF4423 PF14394.6 gi|568163456|ref|YP_008946807.1| - 0.027 14.2 0.3 0.043 13.5 0.3 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4423) Fe_dep_repress PF01325.19 gi|568163456|ref|YP_008946807.1| - 0.042 14.1 0.0 0.09 13.0 0.0 1.6 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain FeoC PF09012.10 gi|568163456|ref|YP_008946807.1| - 0.049 13.7 0.1 0.079 13.1 0.1 1.3 1 0 0 1 1 1 0 FeoC like transcriptional regulator PAX PF00292.18 gi|568163456|ref|YP_008946807.1| - 0.057 13.3 0.6 0.95 9.4 0.6 2.1 1 1 0 1 1 1 0 'Paired box' domain DMAP1_like PF17024.5 gi|568163456|ref|YP_008946807.1| - 0.069 13.3 0.1 0.11 12.6 0.1 1.5 1 0 0 1 1 1 0 Putative DMAP1-like Rrf2 PF02082.20 gi|568163456|ref|YP_008946807.1| - 0.08 13.3 0.1 0.18 12.2 0.1 1.6 1 0 0 1 1 1 0 Transcriptional regulator Mga PF05043.13 gi|568163456|ref|YP_008946807.1| - 0.087 13.4 0.0 0.15 12.7 0.0 1.4 1 0 0 1 1 1 0 Mga helix-turn-helix domain HTH_36 PF13730.6 gi|568163456|ref|YP_008946807.1| - 0.1 12.6 0.1 0.18 11.8 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|568163456|ref|YP_008946807.1| - 0.11 12.2 0.2 0.39 10.4 0.2 1.9 1 1 0 1 1 1 0 Sigma-70, region 4 HTH_23 PF13384.6 gi|568163456|ref|YP_008946807.1| - 0.13 12.1 0.0 0.87 9.5 0.1 2.1 2 0 0 2 2 2 0 Homeodomain-like domain Desulfoferrod_N PF06397.12 gi|568163457|ref|YP_008946808.1| - 0.013 15.1 0.7 0.073 12.7 0.1 2.2 2 1 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain Lar_restr_allev PF14354.6 gi|568163457|ref|YP_008946808.1| - 0.023 15.0 0.0 0.026 14.9 0.0 1.2 1 0 0 1 1 1 0 Restriction alleviation protein Lar zf-ribbon_3 PF13248.6 gi|568163457|ref|YP_008946808.1| - 0.039 13.4 0.5 0.34 10.4 0.1 2.1 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_4 PF13717.6 gi|568163457|ref|YP_008946808.1| - 0.063 13.2 0.0 0.092 12.7 0.0 1.3 1 0 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|568163457|ref|YP_008946808.1| - 0.082 12.7 0.8 2.5 7.9 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|568163457|ref|YP_008946808.1| - 0.16 11.5 2.0 0.31 10.6 2.0 1.5 1 1 0 1 1 1 0 TFIIB zinc-binding RimK PF08443.11 gi|568163458|ref|YP_008946809.1| - 2.3e-33 115.4 0.0 3.4e-33 114.8 0.0 1.2 1 0 0 1 1 1 1 RimK-like ATP-grasp domain GSH-S_ATP PF02955.16 gi|568163458|ref|YP_008946809.1| - 7.1e-12 45.1 0.0 9.8e-12 44.6 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain CPSase_L_D2 PF02786.17 gi|568163458|ref|YP_008946809.1| - 3.5e-05 23.4 0.0 5.6e-05 22.7 0.0 1.2 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATPgrasp_ST PF14397.6 gi|568163458|ref|YP_008946809.1| - 4.3e-05 22.9 0.1 0.0022 17.3 0.0 2.2 2 0 0 2 2 2 1 Sugar-transfer associated ATP-grasp ATP-grasp_3 PF02655.14 gi|568163458|ref|YP_008946809.1| - 0.00019 21.5 0.0 0.0003 20.9 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_5 PF13549.6 gi|568163458|ref|YP_008946809.1| - 0.00079 18.9 0.0 0.0018 17.8 0.0 1.5 2 0 0 2 2 2 1 ATP-grasp domain ATP-grasp PF02222.22 gi|568163458|ref|YP_008946809.1| - 0.0013 18.3 0.0 0.0023 17.6 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain Ins134_P3_kin PF05770.11 gi|568163458|ref|YP_008946809.1| - 0.0075 15.8 0.2 0.45 10.0 0.1 2.4 1 1 1 2 2 2 1 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain ATP-grasp_2 PF08442.10 gi|568163458|ref|YP_008946809.1| - 0.031 13.8 0.0 0.055 13.0 0.0 1.3 1 0 0 1 1 1 0 ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|568163458|ref|YP_008946809.1| - 0.043 13.3 0.0 0.52 9.8 0.0 2.2 1 1 0 1 1 1 0 D-ala D-ala ligase C-terminus Fungal_lectin PF07938.12 gi|568163458|ref|YP_008946809.1| - 0.061 12.7 0.0 0.092 12.1 0.0 1.2 1 0 0 1 1 1 0 Fungal fucose-specific lectin Aminotran_3 PF00202.21 gi|568163459|ref|YP_008946810.1| - 8.6e-112 373.7 0.0 1.1e-111 373.3 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 gi|568163459|ref|YP_008946810.1| - 0.00047 19.4 0.0 0.0011 18.2 0.0 1.6 1 1 0 1 1 1 1 Aminotransferase class I and II PC_rep PF01851.22 gi|568163459|ref|YP_008946810.1| - 0.15 12.5 0.0 0.43 11.1 0.0 1.8 1 0 0 1 1 1 0 Proteasome/cyclosome repeat Peptidase_M20 PF01546.28 gi|568163460|ref|YP_008946811.1| - 1.9e-26 93.1 0.0 2.2e-26 92.8 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|568163460|ref|YP_008946811.1| - 0.00018 21.4 0.0 0.00037 20.4 0.0 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain Prenyltransf PF01255.19 gi|568163461|ref|YP_008946812.1| - 3.6e-67 226.2 0.0 4.2e-67 226.0 0.0 1.0 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase Fzo_mitofusin PF04799.13 gi|568163461|ref|YP_008946812.1| - 0.051 13.1 0.2 0.086 12.4 0.2 1.3 1 0 0 1 1 1 0 fzo-like conserved region Ribosomal_S8e PF01201.22 gi|568163462|ref|YP_008946813.1| - 1.9e-33 115.6 0.2 2.1e-33 115.4 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S8e SRP19 PF01922.17 gi|568163463|ref|YP_008946814.1| - 2.9e-05 24.9 0.1 3.8e-05 24.6 0.1 1.2 1 0 0 1 1 1 1 SRP19 protein XRN1_D2_D3 PF18334.1 gi|568163463|ref|YP_008946814.1| - 0.0025 18.0 0.0 0.0035 17.5 0.0 1.2 1 0 0 1 1 1 1 Exoribonuclease Xrn1 D2/D3 domain LMBR1 PF04791.16 gi|568164788|ref|YP_008946815.1| - 3.9 6.3 10.2 4.9 6.0 10.2 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein Epimerase PF01370.21 gi|568163464|ref|YP_008946816.1| - 1.7e-42 145.5 0.1 2.3e-42 145.1 0.1 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|568163464|ref|YP_008946816.1| - 7.1e-42 144.0 0.4 4.5e-41 141.4 0.4 1.9 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 gi|568163464|ref|YP_008946816.1| - 6.7e-15 54.9 0.0 8.7e-15 54.6 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain 3Beta_HSD PF01073.19 gi|568163464|ref|YP_008946816.1| - 1.6e-12 47.0 0.3 2.1e-12 46.6 0.3 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 gi|568163464|ref|YP_008946816.1| - 1.6e-09 37.4 0.2 5.2e-06 25.8 0.0 2.3 2 0 0 2 2 2 2 Male sterility protein Polysacc_synt_2 PF02719.15 gi|568163464|ref|YP_008946816.1| - 1.1e-07 31.3 1.5 8.7e-06 25.1 1.5 2.8 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein KR PF08659.10 gi|568163464|ref|YP_008946816.1| - 0.00034 20.6 0.1 0.014 15.3 0.1 2.2 2 0 0 2 2 2 1 KR domain NmrA PF05368.13 gi|568163464|ref|YP_008946816.1| - 0.0061 16.1 0.0 0.014 15.0 0.0 1.6 2 0 0 2 2 2 1 NmrA-like family NAD_binding_10 PF13460.6 gi|568163464|ref|YP_008946816.1| - 0.05 13.5 0.0 0.34 10.8 0.0 2.0 1 1 0 1 1 1 0 NAD(P)H-binding TPP_enzyme_M PF00205.22 gi|568163465|ref|YP_008946817.1| - 7.1e-39 132.7 0.1 1.8e-38 131.3 0.0 1.8 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain TPP_enzyme_N PF02776.18 gi|568163465|ref|YP_008946817.1| - 1.9e-24 86.2 0.0 3.3e-24 85.4 0.0 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PNTB PF02233.16 gi|568163465|ref|YP_008946817.1| - 0.0036 16.3 0.0 0.0061 15.5 0.0 1.2 1 0 0 1 1 1 1 NAD(P) transhydrogenase beta subunit Imm30 PF15565.6 gi|568163465|ref|YP_008946817.1| - 0.021 14.9 0.1 2.3 8.4 0.1 3.1 3 0 0 3 3 3 0 Immunity protein 30 DUF2204 PF09970.9 gi|568163466|ref|YP_008946818.1| - 3.5e-55 186.5 4.5 3.9e-55 186.3 4.5 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase of unknown function (DUF2204) Ribosomal_L40e PF01020.17 gi|568163467|ref|YP_008946819.1| - 9.3e-09 35.0 4.6 1.1e-08 34.8 4.6 1.1 1 0 0 1 1 1 1 Ribosomal L40e family DUF35_N PF12172.8 gi|568163467|ref|YP_008946819.1| - 0.0011 18.7 0.4 0.0016 18.3 0.4 1.3 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) HypA PF01155.19 gi|568163467|ref|YP_008946819.1| - 0.0044 17.0 0.3 0.0047 16.9 0.3 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_2 PF13240.6 gi|568163467|ref|YP_008946819.1| - 0.012 15.3 0.8 0.019 14.7 0.8 1.3 1 0 0 1 1 1 0 zinc-ribbon domain zf-RanBP PF00641.18 gi|568163467|ref|YP_008946819.1| - 0.065 12.6 2.3 0.091 12.1 2.3 1.2 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others zf-ribbon_3 PF13248.6 gi|568163467|ref|YP_008946819.1| - 0.068 12.6 1.0 0.098 12.1 1.0 1.3 1 0 0 1 1 1 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|568163467|ref|YP_008946819.1| - 0.18 12.0 2.5 1.1 9.4 2.7 1.9 1 1 1 2 2 2 0 Zinc ribbon domain Rubredoxin_2 PF18073.1 gi|568163467|ref|YP_008946819.1| - 0.24 11.2 3.3 0.98 9.2 3.3 1.8 1 1 0 1 1 1 0 Rubredoxin metal binding domain KH_5 PF13184.6 gi|568163468|ref|YP_008946820.1| - 0.0013 18.7 0.1 0.0028 17.7 0.1 1.5 1 0 0 1 1 1 1 NusA-like KH domain ECSIT_C PF14784.6 gi|568163468|ref|YP_008946820.1| - 0.061 13.7 0.0 0.58 10.5 0.0 2.1 2 0 0 2 2 2 0 C-terminal domain of the ECSIT protein tRNA-synt_2 PF00152.20 gi|568163469|ref|YP_008946821.1| - 1.5e-91 306.8 0.0 1.8e-91 306.5 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 gi|568163469|ref|YP_008946821.1| - 3.5e-15 55.7 0.2 8.7e-15 54.5 0.2 1.7 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain TruD PF01142.18 gi|568163470|ref|YP_008946822.1| - 1.6e-60 205.1 0.3 8.9e-51 173.0 0.0 2.0 1 1 0 2 2 2 2 tRNA pseudouridine synthase D (TruD) PTH2 PF01981.16 gi|568163471|ref|YP_008946823.1| - 1.8e-44 150.8 0.1 2e-44 150.6 0.1 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 TP_methylase PF00590.20 gi|568163471|ref|YP_008946823.1| - 0.0052 16.8 0.5 0.034 14.1 0.0 1.9 1 1 1 2 2 2 1 Tetrapyrrole (Corrin/Porphyrin) Methylases DUF2000 PF09391.10 gi|568163471|ref|YP_008946823.1| - 0.15 12.0 0.2 6.3 6.7 0.2 2.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2000) DUF1610 PF07754.11 gi|568163472|ref|YP_008946824.1| - 1.9e-14 53.3 6.6 1.4e-11 44.1 2.2 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF1610) DZR PF12773.7 gi|568163472|ref|YP_008946824.1| - 2.2e-06 27.6 19.8 0.00019 21.4 11.4 2.4 1 1 1 2 2 2 2 Double zinc ribbon OrfB_Zn_ribbon PF07282.11 gi|568163472|ref|YP_008946824.1| - 3.9e-05 23.5 8.4 0.0002 21.2 2.0 2.2 1 1 1 2 2 2 1 Putative transposase DNA-binding domain zf-ribbon_3 PF13248.6 gi|568163472|ref|YP_008946824.1| - 0.00012 21.4 16.5 0.55 9.7 5.2 3.9 3 1 0 3 3 3 3 zinc-ribbon domain Nudix_N_2 PF14803.6 gi|568163472|ref|YP_008946824.1| - 0.00076 19.3 8.9 1.7 8.7 0.0 3.4 3 1 0 3 3 3 2 Nudix N-terminal zf-UDP PF14569.6 gi|568163472|ref|YP_008946824.1| - 0.00081 19.5 7.0 0.00091 19.3 7.0 1.1 1 0 0 1 1 1 1 Zinc-binding RING-finger A2L_zn_ribbon PF08792.10 gi|568163472|ref|YP_008946824.1| - 0.0019 17.8 15.5 0.013 15.2 3.8 2.9 2 2 0 2 2 2 1 A2L zinc ribbon domain ADK_lid PF05191.14 gi|568163472|ref|YP_008946824.1| - 0.0031 17.4 7.6 0.038 14.0 3.0 2.5 2 1 0 2 2 2 1 Adenylate kinase, active site lid HypA PF01155.19 gi|568163472|ref|YP_008946824.1| - 0.0034 17.4 7.8 0.0058 16.6 0.4 2.0 1 1 1 2 2 2 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF35_N PF12172.8 gi|568163472|ref|YP_008946824.1| - 0.0056 16.5 11.3 0.94 9.4 0.0 3.3 2 1 1 3 3 3 1 Rubredoxin-like zinc ribbon domain (DUF35_N) Zn-ribbon_8 PF09723.10 gi|568163472|ref|YP_008946824.1| - 0.0067 16.5 2.1 0.0067 16.5 2.1 2.5 1 1 0 2 2 2 1 Zinc ribbon domain zf-CHY PF05495.12 gi|568163472|ref|YP_008946824.1| - 0.0083 16.6 9.2 0.16 12.4 0.3 2.0 1 1 1 2 2 2 2 CHY zinc finger zf-MYND PF01753.18 gi|568163472|ref|YP_008946824.1| - 0.0092 16.1 2.2 0.0092 16.1 2.2 2.1 1 1 1 2 2 2 1 MYND finger HscB_4_cys PF18256.1 gi|568163472|ref|YP_008946824.1| - 0.012 15.5 1.8 0.012 15.5 1.8 2.7 3 0 0 3 3 2 0 Co-chaperone HscB tetracysteine metal binding motif DUF1272 PF06906.11 gi|568163472|ref|YP_008946824.1| - 0.013 15.5 8.3 0.44 10.7 0.6 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF1272) zf-ACC PF17848.1 gi|568163472|ref|YP_008946824.1| - 0.014 15.4 14.0 1.6 8.9 0.4 3.4 3 0 0 3 3 3 0 Acetyl-coA carboxylase zinc finger domain zf_UBZ PF18439.1 gi|568163472|ref|YP_008946824.1| - 0.015 14.9 9.8 3.7 7.2 0.4 3.5 3 1 1 4 4 4 0 Ubiquitin-Binding Zinc Finger Prok-RING_1 PF14446.6 gi|568163472|ref|YP_008946824.1| - 0.017 15.1 4.6 0.017 15.1 4.6 2.3 1 1 1 2 2 2 0 Prokaryotic RING finger family 1 NOB1_Zn_bind PF08772.11 gi|568163472|ref|YP_008946824.1| - 0.019 15.1 3.2 0.019 15.1 3.2 2.2 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like zf-C2HC5 PF06221.13 gi|568163472|ref|YP_008946824.1| - 0.021 14.8 2.6 0.021 14.8 2.6 2.4 1 1 1 2 2 2 0 Putative zinc finger motif, C2HC5-type tRNA-synt_1f PF01921.18 gi|568163472|ref|YP_008946824.1| - 0.022 13.7 0.1 0.025 13.5 0.1 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (K) Dynactin_p62 PF05502.13 gi|568163472|ref|YP_008946824.1| - 0.025 13.4 6.4 0.03 13.1 6.4 1.2 1 0 0 1 1 1 0 Dynactin p62 family Rpr2 PF04032.16 gi|568163472|ref|YP_008946824.1| - 0.026 14.8 8.7 0.65 10.3 2.6 3.0 1 1 1 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Auto_anti-p27 PF06677.12 gi|568163472|ref|YP_008946824.1| - 0.027 14.6 1.7 0.027 14.6 1.7 2.6 1 1 1 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) TF_Zn_Ribbon PF08271.12 gi|568163472|ref|YP_008946824.1| - 0.029 13.9 15.1 0.18 11.3 0.3 3.3 2 1 1 3 3 3 0 TFIIB zinc-binding zf-piccolo PF05715.13 gi|568163472|ref|YP_008946824.1| - 0.031 14.4 10.8 0.47 10.6 0.7 2.3 1 1 1 2 2 2 0 Piccolo Zn-finger C1_2 PF03107.16 gi|568163472|ref|YP_008946824.1| - 0.034 14.5 12.0 0.26 11.6 2.6 2.2 1 1 1 2 2 2 0 C1 domain PolC_DP2 PF03833.13 gi|568163472|ref|YP_008946824.1| - 0.056 11.3 2.0 0.06 11.2 2.0 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 PhnA_Zn_Ribbon PF08274.12 gi|568163472|ref|YP_008946824.1| - 0.076 13.0 9.1 1.2 9.2 1.2 3.2 3 0 0 3 3 3 0 PhnA Zinc-Ribbon zinc_ribbon_2 PF13240.6 gi|568163472|ref|YP_008946824.1| - 0.08 12.7 22.3 0.58 9.9 6.8 3.9 2 2 1 3 3 3 0 zinc-ribbon domain zf-RING_9 PF13901.6 gi|568163472|ref|YP_008946824.1| - 0.08 12.9 6.2 0.093 12.7 6.2 1.1 1 0 0 1 1 1 0 Putative zinc-RING and/or ribbon zinc_ribbon_10 PF10058.9 gi|568163472|ref|YP_008946824.1| - 0.095 12.4 16.1 0.41 10.4 3.2 3.6 2 2 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein FUR PF01475.19 gi|568163472|ref|YP_008946824.1| - 0.2 11.8 0.8 1.8 8.8 0.0 2.2 2 1 1 3 3 2 0 Ferric uptake regulator family PHD PF00628.29 gi|568163472|ref|YP_008946824.1| - 0.2 11.5 10.8 1.3 8.9 1.5 2.5 1 1 1 2 2 2 0 PHD-finger zf_C2H2_10 PF18414.1 gi|568163472|ref|YP_008946824.1| - 0.21 11.2 7.2 1.4 8.5 0.5 2.7 3 0 0 3 3 2 0 C2H2 type zinc-finger zinc_ribbon_9 PF14369.6 gi|568163472|ref|YP_008946824.1| - 0.28 11.5 14.2 0.51 10.6 1.8 3.3 2 2 1 3 3 3 0 zinc-ribbon DUF2321 PF10083.9 gi|568163472|ref|YP_008946824.1| - 0.3 10.7 6.3 1.3 8.7 6.5 2.0 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2321) zinc_ribbon_4 PF13717.6 gi|568163472|ref|YP_008946824.1| - 0.35 10.8 10.1 4.3 7.3 0.0 3.7 3 1 0 4 4 4 0 zinc-ribbon domain zf-NADH-PPase PF09297.11 gi|568163472|ref|YP_008946824.1| - 0.38 10.5 11.1 0.22 11.2 2.6 2.9 2 1 1 3 3 3 0 NADH pyrophosphatase zinc ribbon domain zf-RING_7 PF02591.15 gi|568163472|ref|YP_008946824.1| - 0.39 11.0 0.2 0.39 11.0 0.2 3.7 3 1 0 3 3 2 0 C4-type zinc ribbon domain NinF PF05810.12 gi|568163472|ref|YP_008946824.1| - 0.41 10.6 6.7 0.28 11.1 0.5 2.5 1 1 1 2 2 2 0 NinF protein CpXC PF14353.6 gi|568163472|ref|YP_008946824.1| - 0.52 10.4 8.7 13 5.9 0.4 3.1 1 1 2 3 3 3 0 CpXC protein Chordopox_RPO7 PF05864.12 gi|568163472|ref|YP_008946824.1| - 0.6 10.4 4.5 1.2 9.4 0.0 2.9 2 1 1 3 3 3 0 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) Elf1 PF05129.13 gi|568163472|ref|YP_008946824.1| - 0.71 10.0 8.2 8 6.6 0.0 2.6 1 1 1 2 2 2 0 Transcription elongation factor Elf1 like IBR PF01485.21 gi|568163472|ref|YP_008946824.1| - 0.89 9.8 10.1 21 5.4 10.1 2.2 1 1 0 1 1 1 0 IBR domain, a half RING-finger domain RNA_POL_M_15KD PF02150.16 gi|568163472|ref|YP_008946824.1| - 0.96 9.4 10.6 0.37 10.7 0.8 2.9 1 1 1 2 2 2 0 RNA polymerases M/15 Kd subunit zinc_ribbon_15 PF17032.5 gi|568163472|ref|YP_008946824.1| - 0.99 10.2 12.1 83 4.0 12.4 2.3 1 1 0 1 1 1 0 zinc-ribbon family Rubredoxin_2 PF18073.1 gi|568163472|ref|YP_008946824.1| - 1 9.1 0.1 1 9.1 0.1 3.5 4 0 0 4 4 3 0 Rubredoxin metal binding domain Acetone_carb_G PF08882.11 gi|568163472|ref|YP_008946824.1| - 1 9.5 6.5 1.9 8.7 1.0 2.5 1 1 1 2 2 2 0 Acetone carboxylase gamma subunit zf-C3H2C3 PF17122.5 gi|568163472|ref|YP_008946824.1| - 1 9.4 9.8 0.56 10.3 0.9 2.4 2 0 0 2 2 2 0 Zinc-finger Zn_ribbon_17 PF17120.5 gi|568163472|ref|YP_008946824.1| - 1.1 9.0 12.7 13 5.5 4.5 3.0 1 1 2 3 3 3 0 Zinc-ribbon, C4HC2 type Sgf11 PF08209.11 gi|568163472|ref|YP_008946824.1| - 1.2 8.7 12.8 1.4 8.5 0.1 3.9 3 1 1 4 4 4 0 Sgf11 (transcriptional regulation protein) DpnI PF06044.12 gi|568163472|ref|YP_008946824.1| - 1.6 8.3 6.8 0.57 9.8 4.4 1.3 1 1 0 1 1 1 0 Dam-replacing family Rubredoxin PF00301.20 gi|568163472|ref|YP_008946824.1| - 1.7 8.7 9.9 6.7 6.8 1.0 3.2 2 1 1 3 3 3 0 Rubredoxin zf-LITAF-like PF10601.9 gi|568163472|ref|YP_008946824.1| - 1.8 8.9 13.6 2.2 8.6 2.3 3.5 1 1 1 2 2 2 0 LITAF-like zinc ribbon domain zf-RING_5 PF14634.6 gi|568163472|ref|YP_008946824.1| - 1.8 8.6 11.1 19 5.3 11.1 2.3 1 1 0 1 1 1 0 zinc-RING finger domain DUF1258 PF06869.12 gi|568163472|ref|YP_008946824.1| - 2 7.8 6.6 2.6 7.5 3.1 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1258) zf-tcix PF14952.6 gi|568163472|ref|YP_008946824.1| - 2.1 8.1 13.1 4.4 7.0 2.1 3.1 3 0 0 3 3 3 0 Putative treble-clef, zinc-finger, Zn-binding zf-AN1 PF01428.16 gi|568163472|ref|YP_008946824.1| - 2.9 8.1 12.1 34 4.7 0.1 3.0 1 1 2 3 3 3 0 AN1-like Zinc finger zf-TFIIB PF13453.6 gi|568163472|ref|YP_008946824.1| - 2.9 7.3 14.6 1.1e+02 2.3 14.7 2.8 1 1 0 1 1 1 0 Transcription factor zinc-finger zf-C4_Topoisom PF01396.19 gi|568163472|ref|YP_008946824.1| - 4.8 7.0 14.8 3.1 7.6 0.5 3.4 1 1 1 3 3 3 0 Topoisomerase DNA binding C4 zinc finger zf-Mss51 PF13824.6 gi|568163472|ref|YP_008946824.1| - 5.2 7.3 12.8 9.7 6.4 1.9 2.8 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-C2H2 PF00096.26 gi|568163472|ref|YP_008946824.1| - 6.7 7.4 15.7 16 6.1 0.6 3.9 3 1 0 3 3 3 0 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 gi|568163472|ref|YP_008946824.1| - 8.9 6.9 19.6 2.8 8.5 1.0 4.0 2 2 1 3 3 2 0 Zinc-finger double domain Zn_Tnp_IS1595 PF12760.7 gi|568163472|ref|YP_008946824.1| - 9 6.4 21.2 12 5.9 0.5 3.8 2 1 1 3 3 3 0 Transposase zinc-ribbon domain EF1_GNE PF00736.19 gi|568163473|ref|YP_008946825.1| - 7.7e-19 67.7 0.1 8.5e-19 67.5 0.1 1.0 1 0 0 1 1 1 1 EF-1 guanine nucleotide exchange domain SAS-6_N PF16531.5 gi|568163474|ref|YP_008946826.1| - 0.057 14.0 0.0 0.07 13.7 0.0 1.2 1 0 0 1 1 1 0 Centriolar protein SAS N-terminal EAP30 PF04157.16 gi|568163474|ref|YP_008946826.1| - 0.12 11.7 0.1 0.12 11.6 0.1 1.0 1 0 0 1 1 1 0 EAP30/Vps36 family XPG_I PF00867.18 gi|568163475|ref|YP_008946827.1| - 2.5e-27 95.1 0.0 8.6e-27 93.3 0.0 1.9 2 0 0 2 2 2 1 XPG I-region XPG_N PF00752.17 gi|568163475|ref|YP_008946827.1| - 3.1e-11 43.6 0.0 7.7e-11 42.4 0.0 1.7 1 0 0 1 1 1 1 XPG N-terminal domain 5_3_exonuc PF01367.20 gi|568163475|ref|YP_008946827.1| - 1.1e-06 29.1 0.5 1.1e-06 29.1 0.5 2.3 2 1 0 2 2 2 1 5'-3' exonuclease, C-terminal SAM fold HHH_5 PF14520.6 gi|568163475|ref|YP_008946827.1| - 0.036 14.7 0.5 0.15 12.6 0.1 2.3 2 0 0 2 2 2 0 Helix-hairpin-helix domain DUF3231 PF11553.8 gi|568163475|ref|YP_008946827.1| - 0.042 13.5 0.0 0.084 12.5 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3231) HHH_2 PF12826.7 gi|568163475|ref|YP_008946827.1| - 0.054 13.6 0.1 0.16 12.1 0.1 1.8 1 0 0 1 1 1 0 Helix-hairpin-helix motif SMBP PF16785.5 gi|568163475|ref|YP_008946827.1| - 0.084 13.1 1.5 0.81 9.9 0.1 2.3 2 0 0 2 2 2 0 Small metal-binding protein PEP-utilisers_N PF05524.13 gi|568163475|ref|YP_008946827.1| - 0.43 10.8 3.8 3.4 7.9 0.2 2.7 3 0 0 3 3 3 0 PEP-utilising enzyme, N-terminal COG5 PF10392.9 gi|568163475|ref|YP_008946827.1| - 0.77 9.9 5.2 0.18 12.0 0.8 2.1 3 0 0 3 3 3 0 Golgi transport complex subunit 5 eIF3_N PF09440.10 gi|568163475|ref|YP_008946827.1| - 4.5 7.7 6.0 0.84 10.1 0.1 2.3 2 1 0 2 2 2 0 eIF3 subunit 6 N terminal domain ATP-synt_DE PF00401.20 gi|568163475|ref|YP_008946827.1| - 8.3 6.8 10.9 2.2 8.6 7.0 2.1 2 0 0 2 2 2 0 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NAD_binding_7 PF13241.6 gi|568163476|ref|YP_008946828.1| - 1.8e-25 89.4 0.0 2.5e-25 88.9 0.0 1.2 1 0 0 1 1 1 1 Putative NAD(P)-binding TrkA_N PF02254.18 gi|568163476|ref|YP_008946828.1| - 1.1e-05 25.7 0.0 1.7e-05 25.0 0.0 1.3 1 0 0 1 1 1 1 TrkA-N domain Ribosomal_S9 PF00380.19 gi|568163476|ref|YP_008946828.1| - 0.024 15.2 0.0 0.043 14.3 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein S9/S16 AlaDh_PNT_C PF01262.21 gi|568163476|ref|YP_008946828.1| - 0.027 13.8 0.0 0.082 12.2 0.0 1.7 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain GFO_IDH_MocA PF01408.22 gi|568163476|ref|YP_008946828.1| - 0.11 13.3 0.0 0.17 12.7 0.0 1.3 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold GlutR_N PF05201.15 gi|568164789|ref|YP_008946829.1| - 1.7e-32 112.2 0.0 3.5e-32 111.2 0.0 1.5 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, N-terminal domain GlutR_dimer PF00745.20 gi|568164789|ref|YP_008946829.1| - 1.1e-14 54.6 1.4 2.1e-14 53.7 1.4 1.5 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, dimerisation domain Shikimate_DH PF01488.20 gi|568164789|ref|YP_008946829.1| - 1.9e-14 53.9 0.1 7.6e-14 51.9 0.1 2.0 1 1 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 gi|568164789|ref|YP_008946829.1| - 3.2e-06 27.6 0.0 1e-05 26.0 0.0 1.9 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent ThiF PF00899.21 gi|568164789|ref|YP_008946829.1| - 0.00019 20.9 0.1 0.00034 20.1 0.1 1.3 1 0 0 1 1 1 1 ThiF family Sacchrp_dh_NADP PF03435.18 gi|568164789|ref|YP_008946829.1| - 0.0029 17.9 0.0 0.0094 16.2 0.0 1.9 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain Ldh_1_N PF00056.23 gi|568164789|ref|YP_008946829.1| - 0.003 17.6 0.0 0.0059 16.7 0.0 1.5 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 gi|568164789|ref|YP_008946829.1| - 0.011 15.9 0.0 0.023 14.9 0.0 1.5 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase GFO_IDH_MocA PF01408.22 gi|568164789|ref|YP_008946829.1| - 0.015 16.1 0.0 0.034 15.0 0.0 1.6 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold 2-Hacid_dh_C PF02826.19 gi|568164789|ref|YP_008946829.1| - 0.023 14.0 0.0 0.043 13.2 0.0 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ApbA PF02558.16 gi|568164789|ref|YP_008946829.1| - 0.025 14.2 0.0 0.058 13.0 0.0 1.7 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA NAD_binding_7 PF13241.6 gi|568164789|ref|YP_008946829.1| - 0.033 14.6 0.0 0.11 12.9 0.0 1.9 2 0 0 2 2 2 0 Putative NAD(P)-binding TrkA_N PF02254.18 gi|568164789|ref|YP_008946829.1| - 0.071 13.4 0.0 0.18 12.1 0.0 1.7 1 0 0 1 1 1 0 TrkA-N domain NAD_Gly3P_dh_N PF01210.23 gi|568164789|ref|YP_008946829.1| - 0.097 12.6 0.0 0.29 11.1 0.0 1.8 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PriX PF18689.1 gi|568164789|ref|YP_008946829.1| - 0.13 12.6 4.3 5.9 7.3 1.5 2.8 2 0 0 2 2 2 0 Primase X DapB_N PF01113.20 gi|568164789|ref|YP_008946829.1| - 0.14 12.3 0.0 0.45 10.6 0.0 1.8 1 1 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus ALAD PF00490.21 gi|568163477|ref|YP_008946830.1| - 4.1e-140 466.4 0.9 4.6e-140 466.3 0.9 1.0 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase ComA PF02679.15 gi|568163477|ref|YP_008946830.1| - 0.035 13.6 0.0 2.5 7.5 0.0 2.4 2 0 0 2 2 2 0 (2R)-phospho-3-sulfolactate synthase (ComA) Aminotran_3 PF00202.21 gi|568163478|ref|YP_008946831.1| - 3.1e-70 236.9 0.1 3.7e-70 236.6 0.1 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 gi|568163478|ref|YP_008946831.1| - 8.7e-06 25.1 0.0 1.1e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Porphobil_deam PF01379.20 gi|568163479|ref|YP_008946832.1| - 3.3e-59 199.8 0.1 4.2e-59 199.5 0.1 1.1 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.15 gi|568163479|ref|YP_008946832.1| - 3.9e-09 36.7 0.0 1.2e-08 35.2 0.0 1.9 1 0 0 1 1 1 1 Porphobilinogen deaminase, C-terminal domain HEM4 PF02602.15 gi|568164790|ref|YP_008946833.1| - 1.2e-17 64.1 0.0 1.5e-17 63.8 0.0 1.1 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD Phosphodiest PF01663.22 gi|568163481|ref|YP_008946835.1| - 3.4e-33 115.7 0.0 7.4e-32 111.3 0.0 2.0 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.23 gi|568163481|ref|YP_008946835.1| - 0.0016 17.9 0.0 0.02 14.3 0.0 2.6 3 0 0 3 3 3 1 Sulfatase PglZ PF08665.12 gi|568163481|ref|YP_008946835.1| - 0.0049 17.0 0.0 0.029 14.5 0.0 2.1 2 0 0 2 2 2 1 PglZ domain Fer2_BFD PF04324.15 gi|568164791|ref|YP_008946836.1| - 4.4e-08 33.3 0.7 9.2e-08 32.3 0.7 1.6 1 0 0 1 1 1 1 BFD-like [2Fe-2S] binding domain Pyr_redox_2 PF07992.14 gi|568164791|ref|YP_008946836.1| - 1.4e-07 31.1 0.2 5e-07 29.2 0.1 1.8 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase SO_alpha_A3 PF17806.1 gi|568164791|ref|YP_008946836.1| - 1.4e-05 25.3 0.0 2.8e-05 24.4 0.0 1.5 1 0 0 1 1 1 1 Sarcosine oxidase A3 domain Pyr_redox_3 PF13738.6 gi|568164791|ref|YP_008946836.1| - 0.0022 17.3 0.0 0.093 12.0 0.0 2.9 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase ID PF18543.1 gi|568164791|ref|YP_008946836.1| - 0.02 14.9 0.7 1.8 8.6 0.0 2.8 2 0 0 2 2 2 0 Intracellular delivery domain DAO PF01266.24 gi|568163482|ref|YP_008946837.1| - 1.9e-40 139.5 0.0 2.2e-40 139.3 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase GIDA PF01134.22 gi|568163482|ref|YP_008946837.1| - 5.7e-06 25.7 0.4 0.0002 20.6 0.0 2.1 2 0 0 2 2 2 1 Glucose inhibited division protein A Pyr_redox_3 PF13738.6 gi|568163482|ref|YP_008946837.1| - 9e-05 21.9 0.0 0.00017 20.9 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|568163482|ref|YP_008946837.1| - 0.00046 20.4 0.0 0.0015 18.8 0.0 1.9 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|568163482|ref|YP_008946837.1| - 0.0008 18.7 0.0 0.76 8.9 0.0 2.3 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|568163482|ref|YP_008946837.1| - 0.0011 18.3 0.2 0.002 17.4 0.2 1.4 1 0 0 1 1 1 1 Thi4 family FAD_binding_2 PF00890.24 gi|568163482|ref|YP_008946837.1| - 0.0046 16.1 0.0 0.36 9.8 0.1 2.1 2 0 0 2 2 2 1 FAD binding domain NAD_binding_9 PF13454.6 gi|568163482|ref|YP_008946837.1| - 0.0066 16.4 0.0 0.094 12.7 0.0 2.1 2 0 0 2 2 2 1 FAD-NAD(P)-binding Amino_oxidase PF01593.24 gi|568163482|ref|YP_008946837.1| - 0.0069 15.7 0.0 1.4 8.1 0.0 2.2 2 0 0 2 2 2 2 Flavin containing amine oxidoreductase FAD_binding_3 PF01494.19 gi|568163482|ref|YP_008946837.1| - 0.007 15.7 0.1 0.011 15.0 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain Pyr_redox PF00070.27 gi|568163482|ref|YP_008946837.1| - 0.046 14.3 0.1 0.38 11.4 0.0 2.3 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 gi|568163482|ref|YP_008946837.1| - 0.078 12.0 0.0 0.15 11.1 0.0 1.4 2 0 0 2 2 2 0 Lycopene cyclase protein Shikimate_DH PF01488.20 gi|568163482|ref|YP_008946837.1| - 0.13 12.3 0.1 0.28 11.2 0.1 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase ApbA PF02558.16 gi|568163482|ref|YP_008946837.1| - 0.17 11.5 0.0 0.3 10.7 0.0 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Lactamase_B_2 PF12706.7 gi|568163483|ref|YP_008946838.1| - 2.3e-05 24.0 0.0 4.8e-05 23.0 0.0 1.5 1 0 0 1 1 1 1 Beta-lactamase superfamily domain DNA_ligase_A_M PF01068.21 gi|568163484|ref|YP_008946839.1| - 3.6e-64 216.2 0.6 6.4e-64 215.4 0.6 1.4 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_N PF04675.14 gi|568163484|ref|YP_008946839.1| - 3.8e-39 134.8 1.8 7.8e-39 133.8 1.8 1.6 1 0 0 1 1 1 1 DNA ligase N terminus DNA_ligase_A_C PF04679.15 gi|568163484|ref|YP_008946839.1| - 1e-26 93.4 0.0 2.3e-26 92.3 0.0 1.6 1 0 0 1 1 1 1 ATP dependent DNA ligase C terminal region RNA_ligase PF09414.10 gi|568163484|ref|YP_008946839.1| - 4e-07 30.5 1.5 6.8e-07 29.7 1.5 1.3 1 0 0 1 1 1 1 RNA ligase DNA_ligase_OB_2 PF14743.6 gi|568163484|ref|YP_008946839.1| - 0.035 14.1 0.2 2.4 8.2 0.0 3.0 3 0 0 3 3 3 0 DNA ligase OB-like domain dUTPase PF00692.19 gi|568163485|ref|YP_008946840.1| - 2.5e-24 85.4 0.0 3.1e-24 85.1 0.0 1.1 1 0 0 1 1 1 1 dUTPase DCD PF06559.11 gi|568163485|ref|YP_008946840.1| - 3.3e-08 32.7 0.0 3.9e-07 29.2 0.0 2.4 1 1 0 1 1 1 1 2'-deoxycytidine 5'-triphosphate deaminase (DCD) RHH_1 PF01402.21 gi|568163486|ref|YP_008946841.1| - 0.021 14.8 0.2 0.021 14.8 0.2 2.8 2 0 0 2 2 2 0 Ribbon-helix-helix protein, copG family Nup54 PF13874.6 gi|568163486|ref|YP_008946841.1| - 0.089 12.9 0.6 0.089 12.9 0.6 2.6 2 1 0 2 2 2 0 Nucleoporin complex subunit 54 Muted PF14942.6 gi|568163486|ref|YP_008946841.1| - 0.19 12.0 18.3 0.025 14.9 9.9 2.3 2 0 0 2 2 2 0 Organelle biogenesis, Muted-like protein EMC3_TMCO1 PF01956.16 gi|568163486|ref|YP_008946841.1| - 0.32 10.7 12.9 0.53 10.0 5.1 2.4 2 0 0 2 2 2 0 Integral membrane protein EMC3/TMCO1-like Matrilin_ccoil PF10393.9 gi|568163486|ref|YP_008946841.1| - 0.72 9.8 6.7 0.24 11.3 0.8 3.0 2 2 1 3 3 3 0 Trimeric coiled-coil oligomerisation domain of matrilin CREPT PF16566.5 gi|568163486|ref|YP_008946841.1| - 0.97 9.6 13.5 2.5 8.2 3.4 2.6 1 1 1 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour Ndc1_Nup PF09531.10 gi|568163486|ref|YP_008946841.1| - 1.2 7.8 3.7 1.4 7.5 3.7 1.2 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Uds1 PF15456.6 gi|568163486|ref|YP_008946841.1| - 1.2 9.3 17.4 0.58 10.3 13.6 2.3 2 1 0 2 2 2 0 Up-regulated During Septation Sas10_Utp3 PF04000.15 gi|568163486|ref|YP_008946841.1| - 1.6 9.4 7.0 2.4 8.8 2.7 2.6 2 0 0 2 2 2 0 Sas10/Utp3/C1D family UPF0061 PF02696.14 gi|568163486|ref|YP_008946841.1| - 1.8 7.2 9.2 5.3 5.7 9.3 1.7 1 1 0 1 1 1 0 Uncharacterized ACR, YdiU/UPF0061 family YabA PF06156.13 gi|568163486|ref|YP_008946841.1| - 1.9 9.2 14.0 0.6 10.8 7.0 2.5 2 1 0 2 2 2 0 Initiation control protein YabA p25-alpha PF05517.12 gi|568163486|ref|YP_008946841.1| - 2.9 8.1 9.8 0.4 10.8 3.4 2.3 1 1 1 2 2 2 0 p25-alpha DUF4407 PF14362.6 gi|568163486|ref|YP_008946841.1| - 3.2 7.0 10.4 4.3 6.6 10.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) EST1 PF10374.9 gi|568163486|ref|YP_008946841.1| - 3.3 8.4 7.7 10 6.8 0.1 2.2 2 0 0 2 2 2 0 Telomerase activating protein Est1 Vfa1 PF08432.10 gi|568163486|ref|YP_008946841.1| - 5.8 7.2 15.6 10 6.4 15.3 1.6 1 1 0 1 1 1 0 AAA-ATPase Vps4-associated protein 1 Peptidase_S46 PF10459.9 gi|568163486|ref|YP_008946841.1| - 8.8 4.8 12.8 11 4.5 12.8 1.0 1 0 0 1 1 1 0 Peptidase S46 Thioredoxin_3 PF13192.6 gi|568163487|ref|YP_008946842.1| - 1.5e-27 95.4 1.7 8.2e-15 54.6 1.1 2.3 2 0 0 2 2 2 2 Thioredoxin domain Glutaredoxin PF00462.24 gi|568163487|ref|YP_008946842.1| - 3.8e-05 23.8 3.9 0.059 13.6 1.6 3.1 2 2 0 2 2 2 2 Glutaredoxin Thioredoxin PF00085.20 gi|568163487|ref|YP_008946842.1| - 5.1e-05 23.2 0.8 0.0063 16.5 0.3 2.3 2 0 0 2 2 2 2 Thioredoxin Thioredoxin_2 PF13098.6 gi|568163487|ref|YP_008946842.1| - 0.00011 22.6 6.6 0.024 15.1 0.3 3.4 2 2 0 2 2 2 2 Thioredoxin-like domain Thioredoxin_8 PF13905.6 gi|568163487|ref|YP_008946842.1| - 0.021 15.1 0.1 11 6.4 0.0 2.8 2 1 0 2 2 2 0 Thioredoxin-like OST3_OST6 PF04756.13 gi|568163487|ref|YP_008946842.1| - 0.054 12.8 0.1 0.44 9.9 0.1 1.9 1 1 0 2 2 2 0 OST3 / OST6 family, transporter family DSBA PF01323.20 gi|568163487|ref|YP_008946842.1| - 0.095 12.5 0.8 2.7 7.7 0.0 2.7 2 2 0 2 2 2 0 DSBA-like thioredoxin domain Thioredoxin_4 PF13462.6 gi|568163487|ref|YP_008946842.1| - 0.42 10.8 7.8 3.3 7.8 0.0 3.5 2 2 2 4 4 4 0 Thioredoxin AMMECR1 PF01871.17 gi|568163488|ref|YP_008946843.1| - 1.7e-48 164.4 0.0 2e-48 164.2 0.0 1.1 1 0 0 1 1 1 1 AMMECR1 Mut7-C PF01927.16 gi|568163489|ref|YP_008946844.1| - 9e-35 119.9 7.2 4.4e-32 111.2 7.2 2.0 1 1 0 1 1 1 1 Mut7-C RNAse domain DUF5615 PF18480.1 gi|568163489|ref|YP_008946844.1| - 7.4e-05 22.4 0.0 0.00013 21.6 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF5615) IBR PF01485.21 gi|568163489|ref|YP_008946844.1| - 0.0016 18.6 2.0 0.0032 17.7 2.0 1.4 1 0 0 1 1 1 1 IBR domain, a half RING-finger domain OrfB_Zn_ribbon PF07282.11 gi|568163489|ref|YP_008946844.1| - 0.01 15.8 0.6 0.024 14.5 0.4 1.8 2 0 0 2 2 2 1 Putative transposase DNA-binding domain Rep_fac-A_C PF08646.10 gi|568163489|ref|YP_008946844.1| - 0.21 11.3 6.5 0.24 11.1 5.7 1.4 1 1 0 1 1 1 0 Replication factor-A C terminal domain PHD_2 PF13831.6 gi|568163489|ref|YP_008946844.1| - 1.3 8.6 7.9 0.2 11.2 3.5 2.0 2 0 0 2 2 2 0 PHD-finger zf-piccolo PF05715.13 gi|568163489|ref|YP_008946844.1| - 1.8 8.8 6.4 78 3.5 6.4 2.4 1 1 0 1 1 1 0 Piccolo Zn-finger zf-ACC PF17848.1 gi|568163489|ref|YP_008946844.1| - 2.5 8.3 8.6 11 6.3 0.3 3.5 3 0 0 3 3 3 0 Acetyl-coA carboxylase zinc finger domain COPI_assoc PF08507.10 gi|568163490|ref|YP_008946845.1| - 0.27 11.3 10.1 0.42 10.7 10.1 1.3 1 1 0 1 1 1 0 COPI associated protein DUF5379 PF17350.2 gi|568163490|ref|YP_008946845.1| - 0.38 11.0 7.9 1.3 9.4 7.9 1.7 1 1 0 1 1 1 0 Family of unknown function (DUF5379) FbpA PF05833.11 gi|568163491|ref|YP_008946846.1| - 4.6e-29 101.5 22.4 8.1e-29 100.7 22.4 1.4 1 1 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) NFACT-R_1 PF05670.13 gi|568163491|ref|YP_008946846.1| - 1e-24 87.3 0.6 3.4e-24 85.6 0.0 2.2 2 0 0 2 2 2 1 NFACT protein RNA binding domain NFACT-R_2 PF18297.1 gi|568163491|ref|YP_008946846.1| - 0.00022 21.4 0.0 0.00089 19.4 0.0 2.0 1 0 0 1 1 1 1 NFACT protein RNA binding domain Phage_ABA_S PF18066.1 gi|568163491|ref|YP_008946846.1| - 0.0089 16.7 2.3 0.021 15.5 0.4 2.3 1 1 1 2 2 2 1 Phage ABA sandwich domain P22_AR_C PF10548.9 gi|568163491|ref|YP_008946846.1| - 0.012 15.7 1.4 0.03 14.5 0.2 2.3 3 0 0 3 3 3 0 P22AR C-terminal domain DNA_primase_S PF01896.19 gi|568163491|ref|YP_008946846.1| - 0.034 14.2 0.0 0.12 12.5 0.0 1.7 1 1 0 1 1 1 0 DNA primase small subunit PspA_IM30 PF04012.12 gi|568163491|ref|YP_008946846.1| - 0.091 12.3 12.8 0.052 13.1 2.4 2.4 2 0 0 2 2 2 0 PspA/IM30 family HetR_C PF18460.1 gi|568163491|ref|YP_008946846.1| - 0.19 11.6 5.7 0.15 12.0 0.4 3.1 3 0 0 3 3 3 0 Heterocyst differentiation regulator C-terminal Hood domain Occludin_ELL PF07303.13 gi|568163491|ref|YP_008946846.1| - 0.21 12.3 13.1 0.17 12.6 3.1 2.9 2 0 0 2 2 2 0 Occludin homology domain Apolipoprotein PF01442.18 gi|568163491|ref|YP_008946846.1| - 0.47 10.3 7.2 2.6 7.9 0.9 2.3 2 0 0 2 2 2 0 Apolipoprotein A1/A4/E domain MIP-T3_C PF17749.1 gi|568163491|ref|YP_008946846.1| - 0.75 9.7 11.9 0.19 11.7 1.0 2.5 2 0 0 2 2 2 0 Microtubule-binding protein MIP-T3 C-terminal region Ax_dynein_light PF10211.9 gi|568163491|ref|YP_008946846.1| - 1.3 8.9 18.3 0.19 11.6 6.7 2.8 3 0 0 3 3 2 0 Axonemal dynein light chain UPF0449 PF15136.6 gi|568163491|ref|YP_008946846.1| - 1.9 9.0 13.0 4.8 7.7 1.8 2.6 1 1 2 3 3 3 0 Uncharacterised protein family UPF0449 TSC22 PF01166.18 gi|568163491|ref|YP_008946846.1| - 1.9 8.8 13.2 37 4.7 2.8 3.9 3 0 0 3 3 3 0 TSC-22/dip/bun family DUF4094 PF13334.6 gi|568163491|ref|YP_008946846.1| - 3.5 8.1 5.6 4.3 7.8 1.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4094) Goodbye PF17109.5 gi|568163491|ref|YP_008946846.1| - 5 7.6 7.9 2.7 8.5 2.0 2.7 3 0 0 3 3 3 0 fungal STAND N-terminal Goodbye domain DUF4795 PF16043.5 gi|568163491|ref|YP_008946846.1| - 5 6.7 13.8 0.15 11.7 2.9 2.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) DivIVA PF05103.13 gi|568163491|ref|YP_008946846.1| - 7.6 6.6 17.8 1.4e+02 2.6 17.8 2.3 1 1 0 1 1 1 0 DivIVA protein YtxH PF12732.7 gi|568163491|ref|YP_008946846.1| - 9.5 6.8 9.3 21 5.7 1.8 3.1 2 1 0 2 2 2 0 YtxH-like protein RIO1 PF01163.22 gi|568163492|ref|YP_008946847.1| - 4.2e-35 121.0 0.1 5.8e-35 120.6 0.1 1.2 1 0 0 1 1 1 1 RIO1 family Rio2_N PF09202.11 gi|568163492|ref|YP_008946847.1| - 9.4e-05 22.6 0.2 0.00019 21.6 0.2 1.6 1 0 0 1 1 1 1 Rio2, N-terminal Pkinase PF00069.25 gi|568163492|ref|YP_008946847.1| - 0.002 17.6 0.4 0.0057 16.1 0.4 1.9 1 1 0 1 1 1 1 Protein kinase domain Pkinase_fungal PF17667.1 gi|568163492|ref|YP_008946847.1| - 0.0029 16.4 0.0 0.0035 16.2 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 gi|568163492|ref|YP_008946847.1| - 0.004 17.1 0.0 0.0081 16.1 0.0 1.4 1 1 0 1 1 1 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 gi|568163492|ref|YP_008946847.1| - 0.007 16.0 0.6 1.3 8.6 0.4 2.2 1 1 1 2 2 2 2 Choline/ethanolamine kinase UPF0137 PF03677.13 gi|568163492|ref|YP_008946847.1| - 0.042 13.6 0.7 0.062 13.1 0.1 1.6 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0137) HTH_5 PF01022.20 gi|568163492|ref|YP_008946847.1| - 0.054 13.4 0.4 0.16 11.8 0.2 1.9 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family DUF460 PF04312.13 gi|568163493|ref|YP_008946848.1| - 1.2e-50 170.9 0.5 2.5e-50 169.9 0.5 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF460) SlyX PF04102.12 gi|568163493|ref|YP_008946848.1| - 0.037 14.6 5.8 0.41 11.3 1.1 2.7 2 0 0 2 2 2 0 SlyX TPR_MLP1_2 PF07926.12 gi|568163493|ref|YP_008946848.1| - 0.072 13.2 8.5 0.038 14.0 3.0 2.9 2 1 0 2 2 2 0 TPR/MLP1/MLP2-like protein SAP PF02037.27 gi|568163493|ref|YP_008946848.1| - 0.11 12.3 0.5 0.53 10.1 0.1 2.4 2 0 0 2 2 2 0 SAP domain YabA PF06156.13 gi|568163493|ref|YP_008946848.1| - 0.19 12.4 9.9 4.8 7.9 5.1 3.3 2 1 1 3 3 3 0 Initiation control protein YabA V-SNARE PF05008.15 gi|568163493|ref|YP_008946848.1| - 0.31 11.5 10.5 3.8 8.0 0.1 4.6 4 0 0 4 4 4 0 Vesicle transport v-SNARE protein N-terminus GIT_CC PF16559.5 gi|568163493|ref|YP_008946848.1| - 0.38 10.7 2.7 4 7.4 0.1 2.7 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor CCDC92 PF14916.6 gi|568163493|ref|YP_008946848.1| - 0.91 9.3 6.0 1.8 8.4 1.0 2.6 2 0 0 2 2 2 0 Coiled-coil domain of unknown function DUF5601 PF18151.1 gi|568163493|ref|YP_008946848.1| - 1.4 9.3 4.9 1.1 9.6 1.0 3.0 2 1 0 2 2 2 0 Domain of unknown function (DUF5601) DUF4258 PF14076.6 gi|568163493|ref|YP_008946848.1| - 2.5 8.5 6.5 2.2 8.7 0.0 3.3 4 0 0 4 4 3 0 Domain of unknown function (DUF4258) Spc29 PF17082.5 gi|568163493|ref|YP_008946848.1| - 3.5 7.4 10.9 1.1 9.1 5.7 2.2 1 1 1 2 2 2 0 Spindle Pole Component 29 AdoMet_Synthase PF01941.19 gi|568163494|ref|YP_008946849.1| - 4.9e-168 559.0 4.6 5.5e-168 558.8 4.6 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase (AdoMet synthetase) LSM PF01423.22 gi|568163495|ref|YP_008946850.1| - 3.4e-22 77.9 0.2 4e-22 77.7 0.2 1.1 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.6 gi|568163495|ref|YP_008946850.1| - 0.096 12.8 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 Ataxin 2 SM domain HTH_5 PF01022.20 gi|568163496|ref|YP_008946851.1| - 8.9e-13 47.9 0.1 1.6e-12 47.1 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|568163496|ref|YP_008946851.1| - 3.7e-09 36.5 0.0 5.2e-09 36.0 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|568163496|ref|YP_008946851.1| - 1.5e-07 31.2 0.0 2.2e-07 30.7 0.0 1.3 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|568163496|ref|YP_008946851.1| - 1.5e-07 31.2 0.1 2.6e-07 30.5 0.1 1.4 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.6 gi|568163496|ref|YP_008946851.1| - 3.6e-06 27.1 0.1 5.3e-06 26.5 0.1 1.4 1 1 0 1 1 1 1 Winged helix DNA-binding domain HTH_24 PF13412.6 gi|568163496|ref|YP_008946851.1| - 4.1e-06 26.3 0.0 6.5e-06 25.6 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|568163496|ref|YP_008946851.1| - 2.1e-05 24.3 0.1 3.7e-05 23.5 0.1 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_Crp_2 PF13545.6 gi|568163496|ref|YP_008946851.1| - 4e-05 23.5 0.1 9.9e-05 22.2 0.1 1.7 1 1 0 1 1 1 1 Crp-like helix-turn-helix domain DprA_WH PF17782.1 gi|568163496|ref|YP_008946851.1| - 0.004 17.2 0.0 0.0054 16.8 0.0 1.2 1 0 0 1 1 1 1 DprA winged helix domain HTH_11 PF08279.12 gi|568163496|ref|YP_008946851.1| - 0.0052 16.7 0.0 0.008 16.1 0.0 1.4 1 0 0 1 1 1 1 HTH domain DUF742 PF05331.11 gi|568163496|ref|YP_008946851.1| - 0.0053 16.6 0.0 0.0063 16.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF742) HTH_27 PF13463.6 gi|568163496|ref|YP_008946851.1| - 0.0079 16.7 0.0 0.012 16.1 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_IclR PF09339.10 gi|568163496|ref|YP_008946851.1| - 0.0085 15.9 0.0 0.013 15.3 0.0 1.4 1 1 0 1 1 1 1 IclR helix-turn-helix domain Fe_dep_repress PF01325.19 gi|568163496|ref|YP_008946851.1| - 0.011 15.9 0.2 0.019 15.2 0.0 1.5 2 0 0 2 2 1 0 Iron dependent repressor, N-terminal DNA binding domain Cdc6_C PF09079.11 gi|568163496|ref|YP_008946851.1| - 0.042 13.8 0.1 0.076 13.0 0.0 1.6 1 1 0 1 1 1 0 CDC6, C terminal winged helix domain Rrf2 PF02082.20 gi|568163496|ref|YP_008946851.1| - 0.051 13.9 0.2 0.068 13.5 0.2 1.3 1 0 0 1 1 1 0 Transcriptional regulator TFIIE_alpha PF02002.17 gi|568163496|ref|YP_008946851.1| - 0.052 13.4 0.3 0.1 12.5 0.3 1.6 1 1 0 1 1 1 0 TFIIE alpha subunit PadR PF03551.14 gi|568163496|ref|YP_008946851.1| - 0.067 13.2 0.0 0.14 12.2 0.0 1.6 1 1 0 1 1 1 0 Transcriptional regulator PadR-like family DUF4423 PF14394.6 gi|568163496|ref|YP_008946851.1| - 0.07 12.8 0.2 0.15 11.7 0.2 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4423) DUF2250 PF10007.9 gi|568163496|ref|YP_008946851.1| - 0.089 12.9 0.3 0.13 12.4 0.3 1.4 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) GntR PF00392.21 gi|568163496|ref|YP_008946851.1| - 0.14 11.9 0.0 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_1 PF00126.27 gi|568163496|ref|YP_008946851.1| - 0.17 11.8 0.0 0.25 11.3 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family CTP_synth_N PF06418.14 gi|568163497|ref|YP_008946852.1| - 7e-119 396.0 2.6 9.7e-119 395.5 2.6 1.2 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.28 gi|568163497|ref|YP_008946852.1| - 3.1e-54 183.6 0.0 5.8e-54 182.8 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|568163497|ref|YP_008946852.1| - 5.5e-09 36.1 0.0 1.4e-08 34.8 0.0 1.7 1 1 0 1 1 1 1 Peptidase C26 CbiA PF01656.23 gi|568163497|ref|YP_008946852.1| - 1.6e-05 24.9 0.0 4.4e-05 23.6 0.0 1.9 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ArsA_ATPase PF02374.15 gi|568163497|ref|YP_008946852.1| - 0.065 12.4 1.5 1.3 8.2 0.4 2.3 1 1 1 2 2 2 0 Anion-transporting ATPase MeaB PF03308.16 gi|568163497|ref|YP_008946852.1| - 0.14 11.2 0.2 0.25 10.3 0.2 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB OMPdecase PF00215.24 gi|568163498|ref|YP_008946853.1| - 1e-17 64.5 4.6 2.4e-17 63.3 4.6 1.6 1 1 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family QRPTase_C PF01729.19 gi|568163498|ref|YP_008946853.1| - 0.00042 20.1 1.4 0.00096 19.0 1.0 1.9 1 1 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain Ribul_P_3_epim PF00834.19 gi|568163498|ref|YP_008946853.1| - 0.0095 15.3 1.0 0.019 14.4 0.2 1.8 2 1 0 2 2 2 1 Ribulose-phosphate 3 epimerase family 4HFCP_synth PF04476.13 gi|568163498|ref|YP_008946853.1| - 0.025 14.3 0.7 0.74 9.5 0.0 2.5 1 1 1 2 2 2 0 4-HFC-P synthase DUF1128 PF06569.11 gi|568163499|ref|YP_008946854.1| - 0.34 10.9 3.8 4 7.5 0.0 3.2 4 1 1 5 5 5 0 Protein of unknown function (DUF1128) Spo12 PF05032.12 gi|568163499|ref|YP_008946854.1| - 1.1 9.2 3.2 1.3 9.0 0.0 2.7 3 0 0 3 3 3 0 Spo12 family DUF2153 PF09921.9 gi|568163500|ref|YP_008946855.1| - 7.7e-50 167.8 4.4 9.3e-50 167.6 4.4 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2153) bMG1 PF17970.1 gi|568163500|ref|YP_008946855.1| - 0.071 13.2 0.1 0.094 12.8 0.1 1.4 1 1 0 1 1 1 0 Bacterial Alpha-2-macroglobulin MG1 domain OSCP PF00213.18 gi|568163500|ref|YP_008946855.1| - 0.11 12.7 0.1 0.15 12.2 0.0 1.3 1 1 0 1 1 1 0 ATP synthase delta (OSCP) subunit Trm112p PF03966.16 gi|568163501|ref|YP_008946856.1| - 8.3e-17 61.5 2.9 1.4e-16 60.8 2.9 1.4 1 0 0 1 1 1 1 Trm112p-like protein zf-UDP PF14569.6 gi|568163501|ref|YP_008946856.1| - 0.0059 16.7 1.9 0.014 15.5 0.8 2.1 2 1 0 2 2 2 1 Zinc-binding RING-finger zf-RING_7 PF02591.15 gi|568163501|ref|YP_008946856.1| - 0.79 10.0 4.1 1.1 9.5 0.0 3.0 3 0 0 3 3 3 0 C4-type zinc ribbon domain Prok-RING_4 PF14447.6 gi|568163501|ref|YP_008946856.1| - 1.3 8.9 7.7 6.9 6.6 1.2 2.6 3 0 0 3 3 3 0 Prokaryotic RING finger family 4 PADR1 PF08063.12 gi|568163501|ref|YP_008946856.1| - 1.7 8.5 7.1 3.8 7.4 0.1 3.1 2 1 1 3 3 3 0 PADR1 (NUC008) domain Sgf11 PF08209.11 gi|568163501|ref|YP_008946856.1| - 1.9 8.1 4.7 1.9 8.1 0.1 2.5 3 0 0 3 3 3 0 Sgf11 (transcriptional regulation protein) zf-ribbon_3 PF13248.6 gi|568163501|ref|YP_008946856.1| - 2.3 7.8 8.5 5.2 6.6 0.2 2.9 3 0 0 3 3 3 0 zinc-ribbon domain Cys_rich_KTR PF14205.6 gi|568163501|ref|YP_008946856.1| - 3.6 7.4 8.1 3 7.7 1.6 3.0 2 1 0 3 3 3 0 Cysteine-rich KTR zf-RING_4 PF14570.6 gi|568163501|ref|YP_008946856.1| - 8.2 6.3 11.0 1.9 8.3 4.4 2.7 3 0 0 3 3 3 0 RING/Ubox like zinc-binding domain PGM_PMM_I PF02878.16 gi|568163502|ref|YP_008946857.1| - 4.2e-42 143.1 0.0 7.5e-42 142.3 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|568163502|ref|YP_008946857.1| - 1.8e-22 79.9 0.0 3.7e-22 78.9 0.0 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.16 gi|568163502|ref|YP_008946857.1| - 5.6e-18 65.2 0.0 9.8e-18 64.4 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.20 gi|568163502|ref|YP_008946857.1| - 5.9e-10 39.2 0.0 1.7e-09 37.7 0.0 1.8 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain Glycos_transf_1 PF00534.20 gi|568163503|ref|YP_008946858.1| - 2e-28 99.1 0.3 3e-28 98.5 0.3 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|568163503|ref|YP_008946858.1| - 1.8e-21 76.9 0.1 5.9e-21 75.2 0.1 1.9 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_4 PF13692.6 gi|568163503|ref|YP_008946858.1| - 1.6e-15 57.7 0.0 3.2e-15 56.8 0.0 1.5 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|568163503|ref|YP_008946858.1| - 4.3e-13 50.0 0.0 2.7e-11 44.1 0.0 2.3 1 1 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 gi|568163503|ref|YP_008946858.1| - 2.5e-05 24.6 0.0 4.7e-05 23.7 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 NTNH_C PF08470.10 gi|568163503|ref|YP_008946858.1| - 0.092 12.6 0.2 0.18 11.7 0.2 1.5 1 0 0 1 1 1 0 Nontoxic nonhaemagglutinin C-terminal DRTGG PF07085.12 gi|568163503|ref|YP_008946858.1| - 0.15 11.9 0.1 0.84 9.5 0.0 1.9 1 1 1 2 2 2 0 DRTGG domain MTS PF05175.14 gi|568163504|ref|YP_008946859.1| - 1.6e-32 112.4 0.0 1.8e-32 112.2 0.0 1.0 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_18 PF12847.7 gi|568163504|ref|YP_008946859.1| - 1.3e-09 38.2 0.0 2.1e-09 37.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|568163504|ref|YP_008946859.1| - 1.9e-07 31.0 0.0 2.5e-07 30.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|568163504|ref|YP_008946859.1| - 1.9e-07 30.8 0.0 2.2e-07 30.6 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 gi|568163504|ref|YP_008946859.1| - 3.5e-07 30.8 0.0 5e-07 30.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain GidB PF02527.15 gi|568163504|ref|YP_008946859.1| - 4e-07 29.5 0.1 5.1e-07 29.2 0.1 1.3 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G Methyltransf_15 PF09445.10 gi|568163504|ref|YP_008946859.1| - 3.1e-06 26.9 0.1 3.4e-06 26.7 0.1 1.3 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Met_10 PF02475.16 gi|568163504|ref|YP_008946859.1| - 1.3e-05 25.1 0.1 1.4e-05 24.9 0.1 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Cons_hypoth95 PF03602.15 gi|568163504|ref|YP_008946859.1| - 3.8e-05 23.4 0.0 4.5e-05 23.2 0.0 1.1 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_16 PF10294.9 gi|568163504|ref|YP_008946859.1| - 7.1e-05 22.6 0.0 0.00011 21.9 0.0 1.2 1 0 0 1 1 1 1 Lysine methyltransferase Methyltransf_12 PF08242.12 gi|568163504|ref|YP_008946859.1| - 0.00026 21.7 0.0 0.00037 21.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain rRNA_methylase PF06962.12 gi|568163504|ref|YP_008946859.1| - 0.00028 20.9 0.1 0.43 10.6 0.0 2.1 2 0 0 2 2 2 2 Putative rRNA methylase DUF43 PF01861.16 gi|568163504|ref|YP_008946859.1| - 0.00037 19.8 0.0 0.00056 19.2 0.0 1.2 1 0 0 1 1 1 1 Branched-chain polyamine synthase A C-terminal domain Methyltransf_4 PF02390.17 gi|568163504|ref|YP_008946859.1| - 0.00069 19.1 0.0 0.0011 18.5 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase TrmK PF04816.12 gi|568163504|ref|YP_008946859.1| - 0.0008 19.0 0.0 0.0011 18.5 0.0 1.2 1 0 0 1 1 1 1 tRNA (adenine(22)-N(1))-methyltransferase Methyltransf_11 PF08241.12 gi|568163504|ref|YP_008946859.1| - 0.0037 17.9 0.0 0.0062 17.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.18 gi|568163504|ref|YP_008946859.1| - 0.011 15.4 0.0 0.013 15.1 0.0 1.2 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 TehB PF03848.14 gi|568163504|ref|YP_008946859.1| - 0.017 14.5 0.5 0.027 13.9 0.1 1.4 2 0 0 2 2 2 0 Tellurite resistance protein TehB CMAS PF02353.20 gi|568163504|ref|YP_008946859.1| - 0.027 13.8 0.0 0.032 13.5 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Methyltransf_23 PF13489.6 gi|568163504|ref|YP_008946859.1| - 0.027 14.3 0.0 0.042 13.7 0.0 1.3 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_32 PF13679.6 gi|568163504|ref|YP_008946859.1| - 0.099 12.6 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_5 PF01795.19 gi|568163504|ref|YP_008946859.1| - 0.13 11.7 0.0 0.31 10.5 0.0 1.5 1 1 1 2 2 2 0 MraW methylase family Methyltransf_24 PF13578.6 gi|568163504|ref|YP_008946859.1| - 0.17 12.9 0.0 0.23 12.5 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain TruB_C_2 PF16198.5 gi|568163505|ref|YP_008946860.1| - 1.2e-20 73.4 0.1 2.2e-20 72.5 0.1 1.4 1 0 0 1 1 1 1 tRNA pseudouridylate synthase B C-terminal domain PUA PF01472.20 gi|568163505|ref|YP_008946860.1| - 2.2e-15 56.4 0.0 5.1e-15 55.2 0.1 1.6 2 0 0 2 2 2 1 PUA domain TruB_N PF01509.18 gi|568163505|ref|YP_008946860.1| - 4.9e-08 33.5 0.1 3e-06 27.7 0.1 2.8 1 1 0 1 1 1 1 TruB family pseudouridylate synthase (N terminal domain) UPF0113 PF03657.13 gi|568163505|ref|YP_008946860.1| - 0.00099 19.3 0.9 0.02 15.1 0.1 2.4 2 0 0 2 2 2 1 UPF0113 PUA domain DKCLD PF08068.12 gi|568163506|ref|YP_008946861.1| - 7.6e-13 48.3 0.0 1e-12 47.9 0.0 1.2 1 0 0 1 1 1 1 DKCLD (NUC011) domain TruB_N PF01509.18 gi|568163506|ref|YP_008946861.1| - 0.093 13.1 0.1 0.17 12.2 0.0 1.4 2 0 0 2 2 2 0 TruB family pseudouridylate synthase (N terminal domain) KOW PF00467.29 gi|568163507|ref|YP_008946862.1| - 0.00066 19.5 0.4 0.00066 19.5 0.4 1.9 2 1 0 2 2 2 1 KOW motif Ribosomal_L14e PF01929.17 gi|568163507|ref|YP_008946862.1| - 0.0037 17.7 0.1 0.0053 17.2 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L14 XisI PF08869.11 gi|568163507|ref|YP_008946862.1| - 0.0083 16.5 0.1 0.01 16.2 0.1 1.1 1 0 0 1 1 1 1 XisI protein DEAD PF00270.29 gi|568163508|ref|YP_008946863.1| - 5.6e-31 107.7 0.0 1.2e-30 106.6 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|568163508|ref|YP_008946863.1| - 4.6e-22 78.5 0.2 1.2e-18 67.5 0.1 3.0 2 0 0 2 2 2 2 Helicase conserved C-terminal domain DEAD_assoc PF08494.11 gi|568163508|ref|YP_008946863.1| - 5.8e-17 62.1 0.0 1.1e-16 61.3 0.0 1.5 1 0 0 1 1 1 1 DEAD/H associated ResIII PF04851.15 gi|568163508|ref|YP_008946863.1| - 2.7e-06 27.5 0.1 1e-05 25.6 0.0 2.0 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_19 PF13245.6 gi|568163508|ref|YP_008946863.1| - 6.8e-05 23.2 0.0 0.0008 19.8 0.0 2.5 2 1 0 2 2 2 1 AAA domain PrpR_N PF06506.11 gi|568163508|ref|YP_008946863.1| - 0.0024 17.5 0.0 0.0089 15.6 0.0 2.0 1 0 0 1 1 1 1 Propionate catabolism activator AAA_22 PF13401.6 gi|568163508|ref|YP_008946863.1| - 0.01 16.1 0.6 0.12 12.6 0.6 2.6 1 1 0 1 1 1 0 AAA domain Pox_EPC_I2-L1 PF12575.8 gi|568163508|ref|YP_008946863.1| - 0.1 12.9 0.3 0.33 11.2 0.3 1.8 1 0 0 1 1 1 0 Poxvirus entry protein complex L1 and I2 zinc_ribbon_10 PF10058.9 gi|568163508|ref|YP_008946863.1| - 0.23 11.2 1.6 0.63 9.8 1.6 1.7 1 0 0 1 1 1 0 Predicted integral membrane zinc-ribbon metal-binding protein DUF87 PF01935.17 gi|568163509|ref|YP_008946864.1| - 5.2e-08 33.3 1.8 1.7e-06 28.3 1.6 2.4 1 1 1 2 2 2 1 Helicase HerA, central domain AAA_10 PF12846.7 gi|568163509|ref|YP_008946864.1| - 9.1e-07 28.1 1.0 0.00035 19.6 0.0 2.5 2 1 0 2 2 2 2 AAA-like domain AAA_22 PF13401.6 gi|568163509|ref|YP_008946864.1| - 3.2e-05 24.2 0.0 0.23 11.7 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.6 gi|568163509|ref|YP_008946864.1| - 0.00014 22.4 0.0 0.00057 20.4 0.0 2.0 2 0 0 2 2 2 1 AAA domain TrwB_AAD_bind PF10412.9 gi|568163509|ref|YP_008946864.1| - 0.00096 18.2 0.0 0.11 11.4 0.0 2.2 2 0 0 2 2 2 2 Type IV secretion-system coupling protein DNA-binding domain ABC_tran PF00005.27 gi|568163509|ref|YP_008946864.1| - 0.0057 17.2 0.1 0.012 16.1 0.1 1.5 1 0 0 1 1 1 1 ABC transporter AAA_5 PF07728.14 gi|568163509|ref|YP_008946864.1| - 0.0072 16.3 0.0 0.014 15.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_29 PF13555.6 gi|568163509|ref|YP_008946864.1| - 0.0078 15.9 0.3 0.016 14.9 0.3 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF3439 PF11921.8 gi|568163509|ref|YP_008946864.1| - 0.035 14.1 0.0 0.067 13.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) AAA PF00004.29 gi|568163509|ref|YP_008946864.1| - 0.06 13.8 0.1 0.25 11.8 0.0 1.9 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 gi|568163509|ref|YP_008946864.1| - 0.11 12.4 0.1 0.24 11.3 0.1 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_16 PF13191.6 gi|568163509|ref|YP_008946864.1| - 0.15 12.4 0.0 0.3 11.4 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain RNA_pol_Rpo13 PF12136.8 gi|568163510|ref|YP_008946865.1| - 3.7e-18 65.1 3.9 3.7e-18 65.1 3.9 2.7 3 0 0 3 3 3 1 RNA polymerase Rpo13 subunit HTH domain PCNA_C PF02747.15 gi|568163511|ref|YP_008946866.1| - 6.4e-07 29.6 0.9 0.0012 19.0 0.0 3.2 1 1 1 3 3 3 2 Proliferating cell nuclear antigen, C-terminal domain PCNA_N PF00705.18 gi|568163511|ref|YP_008946866.1| - 1e-05 25.2 1.0 3.1e-05 23.7 0.3 2.1 2 1 1 3 3 3 1 Proliferating cell nuclear antigen, N-terminal domain Rad9 PF04139.13 gi|568163511|ref|YP_008946866.1| - 0.00066 19.2 0.9 0.0047 16.4 0.4 2.1 2 0 0 2 2 2 1 Rad9 Svf1 PF08622.10 gi|568163511|ref|YP_008946866.1| - 0.11 12.5 0.1 0.24 11.4 0.1 1.6 1 1 0 1 1 1 0 Svf1-like N-terminal lipocalin domain DUF3979 PF13141.6 gi|568163511|ref|YP_008946866.1| - 0.87 9.9 4.1 2.2 8.6 0.8 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3979) Amidohydro_1 PF01979.20 gi|568163512|ref|YP_008946867.1| - 3e-17 63.0 0.0 1.7e-14 53.9 0.0 2.1 2 0 0 2 2 2 2 Amidohydrolase family TEBP_beta PF07404.11 gi|568163512|ref|YP_008946867.1| - 0.15 11.4 0.1 1.3 8.3 0.0 1.9 2 0 0 2 2 2 0 Telomere-binding protein beta subunit (TEBP beta) GCH_III PF05165.12 gi|568163513|ref|YP_008946868.1| - 8.6e-23 80.9 0.1 1.7e-10 40.6 0.1 2.0 1 1 1 2 2 2 2 GTP cyclohydrolase III DMRL_synthase PF00885.19 gi|568163514|ref|YP_008946869.1| - 2.7e-35 121.3 1.1 3.3e-35 121.0 1.1 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase Metallophos_3 PF14582.6 gi|568163514|ref|YP_008946869.1| - 0.011 15.0 1.3 0.93 8.8 0.2 2.1 1 1 1 2 2 2 0 Metallophosphoesterase, calcineurin superfamily ADSL_C PF10397.9 gi|568163514|ref|YP_008946869.1| - 0.016 15.7 0.0 0.041 14.4 0.0 1.6 1 0 0 1 1 1 0 Adenylosuccinate lyase C-terminus TM_PBP2_N PF16296.5 gi|568163514|ref|YP_008946869.1| - 0.087 13.0 0.1 0.78 9.9 0.0 2.2 2 1 0 2 2 2 0 N-terminal of TM subunit in PBP-dependent ABC transporters DMRL_synthase PF00885.19 gi|568163515|ref|YP_008946870.1| - 7.3e-10 38.8 0.1 8.7e-10 38.6 0.1 1.1 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase DHBP_synthase PF00926.19 gi|568163516|ref|YP_008946871.1| - 5.8e-44 149.9 0.0 6.9e-44 149.7 0.0 1.0 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase DUF2208 PF09973.9 gi|568163517|ref|YP_008946873.1| - 1.8e-65 220.8 23.6 2.1e-65 220.6 23.6 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2208) Rer1 PF03248.13 gi|568163517|ref|YP_008946873.1| - 0.0018 18.0 14.7 0.0038 17.0 3.8 2.3 2 0 0 2 2 2 2 Rer1 family PDR_CDR PF06422.12 gi|568163517|ref|YP_008946873.1| - 0.13 12.2 4.9 0.11 12.4 1.0 2.2 2 0 0 2 2 2 0 CDR ABC transporter DPM3 PF08285.11 gi|568163517|ref|YP_008946873.1| - 1.3 9.3 6.7 1 9.6 2.3 2.4 2 0 0 2 2 2 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) GATase_3 PF07685.14 gi|568163518|ref|YP_008946874.1| - 2.4e-38 131.7 0.1 3.8e-38 131.0 0.1 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain AAA_26 PF13500.6 gi|568163518|ref|YP_008946874.1| - 3.2e-13 49.9 0.0 1.6e-08 34.6 0.0 2.4 2 0 0 2 2 2 2 AAA domain CbiA PF01656.23 gi|568163518|ref|YP_008946874.1| - 2.3e-10 40.6 0.1 7.8e-10 38.9 0.0 1.8 2 0 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain PCNA_N PF00705.18 gi|568163519|ref|YP_008946875.1| - 6.2e-15 55.0 0.0 1.9e-14 53.4 0.0 1.7 2 0 0 2 2 2 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 gi|568163519|ref|YP_008946875.1| - 1.3e-11 44.8 0.7 1.5e-09 38.1 0.1 2.2 2 0 0 2 2 2 2 Proliferating cell nuclear antigen, C-terminal domain Rad1 PF02144.16 gi|568163519|ref|YP_008946875.1| - 4.1e-10 39.2 0.9 3.3e-05 23.1 0.0 2.1 1 1 0 2 2 2 2 Repair protein Rad1/Rec1/Rad17 Rad9 PF04139.13 gi|568163519|ref|YP_008946875.1| - 3.7e-08 33.1 0.3 5.1e-08 32.7 0.3 1.1 1 0 0 1 1 1 1 Rad9 DNA_pol3_beta_3 PF02768.15 gi|568163519|ref|YP_008946875.1| - 0.024 14.5 1.3 1.4 8.8 0.1 2.4 2 0 0 2 2 2 0 DNA polymerase III beta subunit, C-terminal domain PhoU_div PF01865.16 gi|568163519|ref|YP_008946875.1| - 1.4 8.2 5.9 0.72 9.1 1.4 2.3 2 1 0 2 2 2 0 Protein of unknown function DUF47 Meth_synt_1 PF08267.12 gi|568163520|ref|YP_008946876.1| - 6.1e-20 71.9 2.0 6.1e-20 71.9 2.0 1.7 2 0 0 2 2 2 1 Cobalamin-independent synthase, N-terminal domain Meth_synt_2 PF01717.18 gi|568163520|ref|YP_008946876.1| - 0.00088 18.6 0.0 0.0038 16.5 0.0 2.0 1 1 0 1 1 1 1 Cobalamin-independent synthase, Catalytic domain DUF2150 PF09920.9 gi|568163520|ref|YP_008946876.1| - 0.022 14.7 0.5 0.07 13.1 0.1 1.9 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2150) Meth_synt_2 PF01717.18 gi|568163521|ref|YP_008946877.1| - 2e-64 218.0 0.0 2.5e-64 217.6 0.0 1.0 1 0 0 1 1 1 1 Cobalamin-independent synthase, Catalytic domain Meth_synt_1 PF08267.12 gi|568163521|ref|YP_008946877.1| - 8.1e-14 51.8 1.6 1.2e-12 48.0 1.5 2.0 2 0 0 2 2 2 1 Cobalamin-independent synthase, N-terminal domain DUF4830 PF16112.5 gi|568163521|ref|YP_008946877.1| - 0.079 13.4 0.2 0.23 11.9 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4830) Ribosomal_S13_N PF08069.12 gi|568163522|ref|YP_008946878.1| - 8.2e-23 80.2 0.1 2.7e-22 78.6 0.0 1.8 2 0 0 2 2 2 1 Ribosomal S13/S15 N-terminal domain Ribosomal_S15 PF00312.22 gi|568163522|ref|YP_008946878.1| - 7e-14 51.8 0.1 1e-13 51.3 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein S15 DUF2408 PF10303.9 gi|568163522|ref|YP_008946878.1| - 0.019 15.5 0.0 0.033 14.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2408) CbiX PF01903.17 gi|568163523|ref|YP_008946879.1| - 9.2e-28 96.7 0.1 1.1e-27 96.5 0.1 1.0 1 0 0 1 1 1 1 CbiX CbiK PF06180.11 gi|568163523|ref|YP_008946879.1| - 2.5e-05 23.8 0.0 2.8e-05 23.6 0.0 1.1 1 0 0 1 1 1 1 Cobalt chelatase (CbiK) Ferrochelatase PF00762.19 gi|568163523|ref|YP_008946879.1| - 0.035 13.2 0.0 0.035 13.2 0.0 1.3 1 0 0 1 1 1 0 Ferrochelatase Ribosomal_S6e PF01092.19 gi|568163524|ref|YP_008946880.1| - 2.8e-23 82.2 0.5 7.7e-22 77.6 0.0 2.3 2 0 0 2 2 2 2 Ribosomal protein S6e GTP_EFTU PF00009.27 gi|568163525|ref|YP_008946881.1| - 1.5e-29 103.0 0.1 7.9e-29 100.6 0.1 2.0 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain eIF2_C PF09173.11 gi|568163525|ref|YP_008946881.1| - 1.5e-25 89.3 1.3 3.6e-25 88.0 1.3 1.7 1 0 0 1 1 1 1 Initiation factor eIF2 gamma, C terminal GTP_EFTU_D2 PF03144.25 gi|568163525|ref|YP_008946881.1| - 3.1e-09 37.1 0.4 2.8e-08 34.0 0.2 2.4 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|568163525|ref|YP_008946881.1| - 1e-05 25.5 0.0 4.3e-05 23.6 0.0 2.0 2 0 0 2 2 2 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 gi|568163525|ref|YP_008946881.1| - 0.00011 22.2 0.1 0.0054 16.7 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase PduV-EutP PF10662.9 gi|568163525|ref|YP_008946881.1| - 0.0055 16.5 0.2 0.6 9.8 0.0 2.4 2 0 0 2 2 2 2 Ethanolamine utilisation - propanediol utilisation PIN_9 PF18477.1 gi|568163526|ref|YP_008946882.1| - 3.5e-12 46.6 0.1 4.2e-12 46.4 0.1 1.1 1 0 0 1 1 1 1 PIN like domain PIN_4 PF13638.6 gi|568163526|ref|YP_008946882.1| - 4.7e-07 30.1 0.3 3.8e-05 24.0 0.3 2.0 1 1 0 1 1 1 1 PIN domain PIN PF01850.21 gi|568163526|ref|YP_008946882.1| - 3.9e-06 27.4 0.2 1.4e-05 25.6 0.2 1.8 1 1 0 1 1 1 1 PIN domain DUF5615 PF18480.1 gi|568163526|ref|YP_008946882.1| - 0.019 14.7 0.1 0.04 13.7 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF5615) S1 PF00575.23 gi|568163527|ref|YP_008946883.1| - 3.2e-17 62.6 0.8 3.2e-17 62.6 0.8 1.6 2 0 0 2 2 2 1 S1 RNA binding domain SHS2_Rpb7-N PF03876.17 gi|568163527|ref|YP_008946883.1| - 7.4e-16 58.3 0.1 1.4e-15 57.4 0.1 1.5 1 0 0 1 1 1 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 RNA_pol_Rbc25 PF08292.12 gi|568163527|ref|YP_008946883.1| - 0.071 13.3 0.0 0.13 12.5 0.0 1.5 1 0 0 1 1 1 0 RNA polymerase III subunit Rpc25 Spt4 PF06093.13 gi|568163528|ref|YP_008946884.1| - 4.3e-13 49.2 0.1 5.2e-13 48.9 0.1 1.1 1 0 0 1 1 1 1 Spt4/RpoE2 zinc finger DUF35_N PF12172.8 gi|568163528|ref|YP_008946884.1| - 0.0031 17.3 2.1 0.0042 16.9 2.1 1.2 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) DZR PF12773.7 gi|568163528|ref|YP_008946884.1| - 0.0061 16.6 1.4 0.0084 16.1 1.4 1.2 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_15 PF17032.5 gi|568163528|ref|YP_008946884.1| - 0.012 16.3 1.1 0.015 16.0 1.1 1.2 1 0 0 1 1 1 0 zinc-ribbon family UPF0547 PF10571.9 gi|568163528|ref|YP_008946884.1| - 0.022 14.8 3.0 0.038 14.1 3.0 1.4 1 0 0 1 1 1 0 Uncharacterised protein family UPF0547 zf-C4H2 PF10146.9 gi|568163528|ref|YP_008946884.1| - 0.052 13.8 1.5 0.063 13.6 1.5 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein RecR PF02132.15 gi|568163528|ref|YP_008946884.1| - 0.11 12.1 1.6 0.15 11.7 1.6 1.2 1 0 0 1 1 1 0 RecR protein DUF359 PF04019.12 gi|568163529|ref|YP_008946885.1| - 6.6e-34 116.3 0.1 8.7e-34 115.9 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF359) PhosphMutase PF10143.9 gi|568163530|ref|YP_008946886.1| - 1.8e-54 184.2 0.1 1.4e-53 181.2 0.0 2.0 2 0 0 2 2 2 1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Metalloenzyme PF01676.18 gi|568163530|ref|YP_008946886.1| - 7.4e-34 117.2 0.1 8.5e-34 117.0 0.1 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Phosphodiest PF01663.22 gi|568163530|ref|YP_008946886.1| - 0.0073 15.9 0.0 0.022 14.4 0.0 1.6 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase DUF4410 PF14366.6 gi|568163530|ref|YP_008946886.1| - 0.049 13.5 0.2 0.14 12.0 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4410) Topoisom_bac PF01131.20 gi|568163531|ref|YP_008946887.1| - 3.3e-71 240.5 0.9 2.7e-70 237.5 0.9 2.4 1 1 0 1 1 1 1 DNA topoisomerase Toprim PF01751.22 gi|568163531|ref|YP_008946887.1| - 1.5e-26 92.6 0.7 8.8e-26 90.1 0.0 2.6 2 1 0 2 2 2 1 Toprim domain DEAD PF00270.29 gi|568163531|ref|YP_008946887.1| - 1.4e-13 51.0 0.0 1.2e-12 47.9 0.0 2.5 1 1 0 1 1 1 1 DEAD/DEAH box helicase zf_Rg PF17915.1 gi|568163531|ref|YP_008946887.1| - 5.3e-06 25.7 0.3 5.3e-06 25.7 0.3 1.9 2 0 0 2 2 2 1 Reverse gyrase zinc finger ResIII PF04851.15 gi|568163531|ref|YP_008946887.1| - 1.4e-05 25.1 2.1 0.001 19.1 0.0 2.8 1 1 1 2 2 2 1 Type III restriction enzyme, res subunit Sgf11 PF08209.11 gi|568163531|ref|YP_008946887.1| - 0.0085 15.6 0.1 0.021 14.4 0.1 1.7 1 0 0 1 1 1 1 Sgf11 (transcriptional regulation protein) AAA_11 PF13086.6 gi|568163531|ref|YP_008946887.1| - 0.042 13.6 0.0 0.11 12.3 0.0 1.7 1 0 0 1 1 1 0 AAA domain DUF4358 PF14270.6 gi|568163531|ref|YP_008946887.1| - 0.079 13.3 3.0 0.37 11.1 0.7 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4358) Toprim_4 PF13662.6 gi|568163531|ref|YP_008946887.1| - 0.11 12.9 0.2 0.99 9.9 0.0 2.6 3 0 0 3 3 3 0 Toprim domain Zn-ribbon_8 PF09723.10 gi|568163531|ref|YP_008946887.1| - 2.6 8.2 3.8 31 4.8 0.3 2.5 2 0 0 2 2 2 0 Zinc ribbon domain CN_hydrolase PF00795.22 gi|568163532|ref|YP_008946888.1| - 9.8e-17 61.1 0.0 1.2e-16 60.9 0.0 1.1 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase TMP-TENI PF02581.17 gi|568163532|ref|YP_008946888.1| - 0.063 12.6 0.1 0.18 11.1 0.1 1.7 2 0 0 2 2 2 0 Thiamine monophosphate synthase AP_endonuc_2 PF01261.24 gi|568163532|ref|YP_008946888.1| - 0.13 11.6 0.0 0.22 10.9 0.0 1.2 1 0 0 1 1 1 0 Xylose isomerase-like TIM barrel Ribosomal_S25 PF03297.15 gi|568163533|ref|YP_008946889.1| - 3.4e-19 68.9 11.4 4.1e-19 68.7 11.4 1.0 1 0 0 1 1 1 1 S25 ribosomal protein HTH_Crp_2 PF13545.6 gi|568163533|ref|YP_008946889.1| - 0.00017 21.5 1.0 0.0084 16.1 0.2 2.2 1 1 1 2 2 2 1 Crp-like helix-turn-helix domain HTH_24 PF13412.6 gi|568163533|ref|YP_008946889.1| - 0.00027 20.4 0.2 0.092 12.3 0.1 2.4 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|568163533|ref|YP_008946889.1| - 0.00083 19.2 1.5 0.0033 17.3 0.2 2.4 2 1 1 3 3 3 1 MarR family EAP30 PF04157.16 gi|568163533|ref|YP_008946889.1| - 0.0049 16.2 0.4 0.008 15.5 0.4 1.3 1 1 0 1 1 1 1 EAP30/Vps36 family TrmB PF01978.19 gi|568163533|ref|YP_008946889.1| - 0.0076 16.1 3.0 0.019 14.8 0.4 2.3 2 1 1 3 3 3 1 Sugar-specific transcriptional regulator TrmB Rrf2 PF02082.20 gi|568163533|ref|YP_008946889.1| - 0.0084 16.4 1.7 1.1 9.7 0.1 2.2 1 1 1 2 2 2 2 Transcriptional regulator IF2_N PF04760.15 gi|568163533|ref|YP_008946889.1| - 0.01 15.7 2.9 0.42 10.5 0.2 2.4 2 0 0 2 2 2 1 Translation initiation factor IF-2, N-terminal region Fe_dep_repress PF01325.19 gi|568163533|ref|YP_008946889.1| - 0.016 15.4 3.3 0.019 15.1 0.2 2.4 2 1 1 3 3 3 0 Iron dependent repressor, N-terminal DNA binding domain HTH_11 PF08279.12 gi|568163533|ref|YP_008946889.1| - 0.016 15.1 0.7 0.016 15.1 0.7 2.0 3 0 0 3 3 3 0 HTH domain MarR_2 PF12802.7 gi|568163533|ref|YP_008946889.1| - 0.094 12.6 0.1 0.39 10.7 0.0 2.0 2 1 1 3 3 3 0 MarR family TrmB PF01978.19 gi|568163534|ref|YP_008946890.1| - 1.9e-19 69.3 0.1 5.9e-19 67.7 0.1 1.8 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|568163534|ref|YP_008946890.1| - 2.8e-06 26.8 0.4 9.6e-06 25.1 0.0 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding Penicillinase_R PF03965.16 gi|568163534|ref|YP_008946890.1| - 0.00044 20.6 0.2 0.00089 19.6 0.2 1.5 1 0 0 1 1 1 1 Penicillinase repressor HTH_27 PF13463.6 gi|568163534|ref|YP_008946890.1| - 0.00049 20.5 0.0 0.001 19.5 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR PF01047.22 gi|568163534|ref|YP_008946890.1| - 0.00055 19.8 0.1 0.0017 18.3 0.0 1.8 2 0 0 2 2 2 1 MarR family HTH_28 PF13518.6 gi|568163534|ref|YP_008946890.1| - 0.0022 18.1 0.0 0.0091 16.1 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain PadR PF03551.14 gi|568163534|ref|YP_008946890.1| - 0.0037 17.2 0.0 0.009 16.0 0.0 1.6 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family TFIIE_alpha PF02002.17 gi|568163534|ref|YP_008946890.1| - 0.0051 16.7 0.1 0.014 15.3 0.1 1.7 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_34 PF13601.6 gi|568163534|ref|YP_008946890.1| - 0.01 16.0 0.0 0.024 14.8 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 gi|568163534|ref|YP_008946890.1| - 0.031 14.3 0.0 0.068 13.2 0.0 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain MarR_2 PF12802.7 gi|568163534|ref|YP_008946890.1| - 0.042 13.8 0.0 0.068 13.1 0.0 1.3 1 0 0 1 1 1 0 MarR family HTH_29 PF13551.6 gi|568163534|ref|YP_008946890.1| - 0.074 13.1 0.0 0.14 12.2 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn helix Rrf2 PF02082.20 gi|568163534|ref|YP_008946890.1| - 0.085 13.2 0.0 0.23 11.9 0.0 1.7 1 0 0 1 1 1 0 Transcriptional regulator SMC_ScpB PF04079.16 gi|568163534|ref|YP_008946890.1| - 0.12 11.9 0.0 0.44 10.2 0.0 1.9 3 0 0 3 3 3 0 Segregation and condensation complex subunit ScpB Endonuclease_1 PF04231.13 gi|568163534|ref|YP_008946890.1| - 0.14 11.8 0.0 0.23 11.1 0.0 1.3 1 0 0 1 1 1 0 Endonuclease I DUF2250 PF10007.9 gi|568163534|ref|YP_008946890.1| - 0.15 12.2 0.2 1.1 9.4 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) RHH_1 PF01402.21 gi|568163535|ref|YP_008946891.1| - 2.5e-09 36.7 0.0 3.1e-09 36.4 0.0 1.1 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family ParD_antitoxin PF03693.14 gi|568163535|ref|YP_008946891.1| - 4.5e-05 23.8 0.0 4.9e-05 23.7 0.0 1.1 1 0 0 1 1 1 1 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH RHH_8 PF17723.1 gi|568163535|ref|YP_008946891.1| - 0.0016 18.6 0.0 0.0018 18.5 0.0 1.1 1 0 0 1 1 1 1 Ribbon-Helix-Helix transcriptional regulator family VapB_antitoxin PF09957.9 gi|568163535|ref|YP_008946891.1| - 0.0018 18.1 0.0 0.0026 17.6 0.0 1.3 1 0 0 1 1 1 1 Bacterial antitoxin of type II TA system, VapB HicB_lk_antitox PF15919.5 gi|568163535|ref|YP_008946891.1| - 0.084 13.0 0.0 0.094 12.8 0.0 1.1 1 0 0 1 1 1 0 HicB_like antitoxin of bacterial toxin-antitoxin system GCD14 PF08704.10 gi|568163536|ref|YP_008946892.1| - 2.9e-30 105.8 0.0 3.9e-30 105.3 0.0 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_31 PF13847.6 gi|568163536|ref|YP_008946892.1| - 9e-11 41.8 0.0 1.3e-10 41.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|568163536|ref|YP_008946892.1| - 9.8e-09 35.3 0.0 1.3e-08 34.8 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_25 PF13649.6 gi|568163536|ref|YP_008946892.1| - 4.1e-07 30.6 0.0 6.8e-07 29.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|568163536|ref|YP_008946892.1| - 3.4e-05 24.4 0.0 6.1e-05 23.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|568163536|ref|YP_008946892.1| - 7.2e-05 22.3 0.0 9.9e-05 21.9 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Ubie_methyltran PF01209.18 gi|568163536|ref|YP_008946892.1| - 7.7e-05 22.1 0.0 0.00014 21.3 0.0 1.4 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family GCD14_N PF14801.6 gi|568163536|ref|YP_008946892.1| - 0.00013 21.7 0.0 0.00023 20.9 0.0 1.3 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit N-term MTS PF05175.14 gi|568163536|ref|YP_008946892.1| - 0.00048 19.7 0.0 0.0029 17.2 0.0 2.1 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_24 PF13578.6 gi|568163536|ref|YP_008946892.1| - 0.0006 20.8 0.0 0.001 20.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|568163536|ref|YP_008946892.1| - 0.00067 19.6 0.0 0.0014 18.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 gi|568163536|ref|YP_008946892.1| - 0.00068 19.7 0.0 0.00086 19.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|568163536|ref|YP_008946892.1| - 0.0042 16.9 0.0 0.076 12.9 0.0 2.1 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_3 PF01596.17 gi|568163536|ref|YP_008946892.1| - 0.0046 16.1 0.0 0.0072 15.5 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase RrnaAD PF00398.20 gi|568163536|ref|YP_008946892.1| - 0.036 13.1 0.0 0.05 12.7 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase UPF0020 PF01170.18 gi|568163536|ref|YP_008946892.1| - 0.066 12.9 0.0 0.14 11.8 0.0 1.6 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 Methyltransf_16 PF10294.9 gi|568163536|ref|YP_008946892.1| - 0.15 11.8 0.0 0.25 11.1 0.0 1.3 1 0 0 1 1 1 0 Lysine methyltransferase Exonuc_X-T_C PF08411.10 gi|568163536|ref|YP_008946892.1| - 0.16 11.1 0.0 0.23 10.5 0.0 1.2 1 0 0 1 1 1 0 Exonuclease C-terminal V-ATPase_G_2 PF16999.5 gi|568163537|ref|YP_008946893.1| - 0.0019 18.6 3.7 0.0027 18.1 3.6 1.3 1 1 0 1 1 1 1 Vacuolar (H+)-ATPase G subunit DUF826 PF05696.11 gi|568163537|ref|YP_008946893.1| - 0.028 14.5 6.5 0.073 13.2 0.7 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF826) ArenaCapSnatch PF17296.2 gi|568163537|ref|YP_008946893.1| - 0.042 13.3 0.8 1.8 7.9 0.1 2.2 1 1 1 2 2 2 0 Arenavirus cap snatching domain DIT1_PvcA PF05141.12 gi|568163537|ref|YP_008946893.1| - 0.093 12.2 1.6 0.11 12.0 1.6 1.0 1 0 0 1 1 1 0 Pyoverdine/dityrosine biosynthesis protein Ribosomal_S8 PF00410.19 gi|568163537|ref|YP_008946893.1| - 0.55 10.2 3.5 0.95 9.4 3.5 1.5 1 1 0 1 1 1 0 Ribosomal protein S8 vATP-synt_AC39 PF01992.16 gi|568164793|ref|YP_008946894.1| - 1.1e-24 87.6 7.2 1.3e-24 87.4 7.2 1.0 1 0 0 1 1 1 1 ATP synthase (C/AC39) subunit ER PF01133.17 gi|568164793|ref|YP_008946894.1| - 0.051 13.6 1.4 0.16 12.0 0.1 2.4 2 1 1 3 3 3 0 Enhancer of rudimentary Ten1_2 PF15490.6 gi|568164793|ref|YP_008946894.1| - 0.1 12.3 0.1 16 5.2 0.0 2.6 1 1 1 2 2 2 0 Telomere-capping, CST complex subunit Rep_N PF08724.10 gi|568164793|ref|YP_008946894.1| - 0.11 12.2 0.0 0.19 11.5 0.0 1.3 1 0 0 1 1 1 0 Rep protein catalytic domain like Aldo_ket_red PF00248.21 gi|568163539|ref|YP_008946896.1| - 7.3e-45 153.4 0.0 9.5e-45 153.0 0.0 1.2 1 0 0 1 1 1 1 Aldo/keto reductase family Ham1p_like PF01725.16 gi|568163540|ref|YP_008946897.1| - 7.1e-50 169.5 0.0 8.1e-50 169.3 0.0 1.0 1 0 0 1 1 1 1 Ham1 family RIO1 PF01163.22 gi|568163541|ref|YP_008946898.1| - 3.6e-11 43.0 0.1 5.4e-11 42.4 0.1 1.3 1 0 0 1 1 1 1 RIO1 family Pkinase PF00069.25 gi|568163541|ref|YP_008946898.1| - 7.3e-10 38.6 0.4 9.1e-10 38.3 0.4 1.2 1 0 0 1 1 1 1 Protein kinase domain Kdo PF06293.14 gi|568163541|ref|YP_008946898.1| - 1.4e-08 34.4 0.0 2.4e-08 33.6 0.0 1.4 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 gi|568163541|ref|YP_008946898.1| - 2.1e-08 34.4 0.0 0.00036 20.5 0.0 2.1 1 1 1 2 2 2 2 Phosphotransferase enzyme family Pkinase_Tyr PF07714.17 gi|568163541|ref|YP_008946898.1| - 3.8e-06 26.4 0.2 6.1e-06 25.7 0.1 1.4 1 1 0 1 1 1 1 Protein tyrosine kinase WaaY PF06176.11 gi|568163541|ref|YP_008946898.1| - 4.8e-05 23.1 0.7 6.7e-05 22.6 0.6 1.5 1 1 0 1 1 1 1 Lipopolysaccharide core biosynthesis protein (WaaY) Pkinase_fungal PF17667.1 gi|568163541|ref|YP_008946898.1| - 0.0049 15.7 0.2 0.0054 15.6 0.2 1.2 1 0 0 1 1 1 1 Fungal protein kinase Choline_kinase PF01633.20 gi|568163541|ref|YP_008946898.1| - 0.022 14.3 0.1 0.049 13.2 0.1 1.6 1 1 0 1 1 1 0 Choline/ethanolamine kinase EcKinase PF02958.20 gi|568163541|ref|YP_008946898.1| - 0.029 13.7 0.2 0.046 13.0 0.1 1.4 2 0 0 2 2 2 0 Ecdysteroid kinase DUF4135 PF13575.6 gi|568163541|ref|YP_008946898.1| - 0.12 11.7 0.6 3.9 6.7 0.0 2.5 1 1 2 3 3 3 0 Domain of unknown function (DUF4135) Peptidase_M22 PF00814.25 gi|568163542|ref|YP_008946899.1| - 2.1e-77 260.5 0.2 2.6e-77 260.2 0.2 1.0 1 0 0 1 1 1 1 Glycoprotease family Ribosomal_S27 PF01599.19 gi|568163543|ref|YP_008946900.1| - 2.8e-14 53.0 1.4 3.6e-14 52.7 1.4 1.2 1 0 0 1 1 1 1 Ribosomal protein S27a Zn_Tnp_IS1595 PF12760.7 gi|568163543|ref|YP_008946900.1| - 0.00036 20.4 2.1 0.00055 19.9 2.1 1.3 1 0 0 1 1 1 1 Transposase zinc-ribbon domain RNA_POL_M_15KD PF02150.16 gi|568163543|ref|YP_008946900.1| - 0.0014 18.4 0.2 0.0033 17.3 0.2 1.5 1 0 0 1 1 1 1 RNA polymerases M/15 Kd subunit OrfB_Zn_ribbon PF07282.11 gi|568163543|ref|YP_008946900.1| - 0.0021 17.9 1.3 0.0024 17.8 1.3 1.3 1 1 0 1 1 1 1 Putative transposase DNA-binding domain Zn_ribbon_SprT PF17283.2 gi|568163543|ref|YP_008946900.1| - 0.0057 16.5 0.5 0.0087 15.9 0.5 1.3 1 0 0 1 1 1 1 SprT-like zinc ribbon domain GFA PF04828.14 gi|568163543|ref|YP_008946900.1| - 0.013 15.9 1.0 0.66 10.3 0.1 2.1 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme Lar_restr_allev PF14354.6 gi|568163543|ref|YP_008946900.1| - 0.017 15.5 1.1 0.031 14.6 1.1 1.4 1 0 0 1 1 1 0 Restriction alleviation protein Lar Nudix_N_2 PF14803.6 gi|568163543|ref|YP_008946900.1| - 0.024 14.5 1.9 0.08 12.9 1.9 1.9 1 1 0 1 1 1 0 Nudix N-terminal NRDD PF13597.6 gi|568163543|ref|YP_008946900.1| - 0.026 13.3 0.6 0.026 13.3 0.6 1.0 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase FAM72 PF14976.6 gi|568163543|ref|YP_008946900.1| - 0.071 13.3 0.5 0.099 12.8 0.5 1.3 1 1 0 1 1 1 0 FAM72 protein zf_UBZ PF18439.1 gi|568163543|ref|YP_008946900.1| - 0.078 12.6 2.3 0.33 10.6 0.1 2.1 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zinc_ribbon_13 PF09855.9 gi|568163543|ref|YP_008946900.1| - 0.091 12.9 1.6 0.94 9.7 0.1 2.2 2 0 0 2 2 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) Zn-ribbon_8 PF09723.10 gi|568163543|ref|YP_008946900.1| - 0.11 12.7 3.2 0.25 11.5 0.1 2.1 1 1 0 2 2 2 0 Zinc ribbon domain zf-ribbon_3 PF13248.6 gi|568163543|ref|YP_008946900.1| - 0.32 10.5 6.3 0.37 10.2 0.4 2.2 2 0 0 2 2 2 0 zinc-ribbon domain UPF0547 PF10571.9 gi|568163543|ref|YP_008946900.1| - 0.35 11.0 5.6 2.3 8.4 5.6 2.0 1 1 0 1 1 1 0 Uncharacterised protein family UPF0547 zf_C2H2_10 PF18414.1 gi|568163543|ref|YP_008946900.1| - 0.41 10.2 2.1 8.2 6.1 0.1 2.2 2 0 0 2 2 2 0 C2H2 type zinc-finger zinc_ribbon_2 PF13240.6 gi|568163543|ref|YP_008946900.1| - 0.78 9.5 0.1 0.78 9.5 0.1 2.8 3 0 0 3 3 3 0 zinc-ribbon domain YhfH PF14149.6 gi|568163543|ref|YP_008946900.1| - 0.79 9.8 7.8 8.4 6.5 7.5 2.1 1 1 1 2 2 2 0 YhfH-like protein Mu-like_Com PF10122.9 gi|568163543|ref|YP_008946900.1| - 2.1 7.9 6.2 0.25 10.8 1.0 1.9 1 1 1 2 2 2 0 Mu-like prophage protein Com Ribosomal_S24e PF01282.19 gi|568163544|ref|YP_008946901.1| - 1.1e-17 63.8 0.1 1.4e-17 63.4 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein S24e Thi4 PF01946.17 gi|568163545|ref|YP_008946902.1| - 1.6e-81 273.0 4.0 1.9e-81 272.8 4.0 1.0 1 0 0 1 1 1 1 Thi4 family DAO PF01266.24 gi|568163545|ref|YP_008946902.1| - 7.2e-15 55.4 5.4 8.3e-09 35.5 0.5 2.3 1 1 1 2 2 2 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|568163545|ref|YP_008946902.1| - 5.1e-10 39.4 0.6 2.1e-09 37.5 0.6 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain FAD_oxidored PF12831.7 gi|568163545|ref|YP_008946902.1| - 5.7e-10 39.1 3.2 7.5e-10 38.7 3.2 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|568163545|ref|YP_008946902.1| - 1.2e-09 37.8 6.6 1.6e-07 30.8 1.0 2.6 3 0 0 3 3 3 2 FAD binding domain Pyr_redox_2 PF07992.14 gi|568163545|ref|YP_008946902.1| - 1.2e-09 37.8 0.4 1.6e-09 37.4 0.4 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|568163545|ref|YP_008946902.1| - 4.8e-07 29.3 0.0 7.4e-07 28.7 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.14 gi|568163545|ref|YP_008946902.1| - 4.2e-06 25.7 0.1 5.7e-06 25.3 0.1 1.3 1 0 0 1 1 1 1 HI0933-like protein GIDA PF01134.22 gi|568163545|ref|YP_008946902.1| - 1.3e-05 24.5 0.7 2.3e-05 23.6 0.7 1.4 1 0 0 1 1 1 1 Glucose inhibited division protein A Pyr_redox_3 PF13738.6 gi|568163545|ref|YP_008946902.1| - 0.00012 21.4 0.0 0.00028 20.3 0.0 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|568163545|ref|YP_008946902.1| - 0.00031 21.3 0.4 0.0013 19.3 0.4 2.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 gi|568163545|ref|YP_008946902.1| - 0.0028 17.0 0.1 0.006 15.9 0.1 1.5 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase Lycopene_cycl PF05834.12 gi|568163545|ref|YP_008946902.1| - 0.0037 16.4 0.7 0.0098 15.0 0.7 1.9 1 1 0 1 1 1 1 Lycopene cyclase protein K_oxygenase PF13434.6 gi|568163545|ref|YP_008946902.1| - 0.018 14.2 0.0 0.029 13.5 0.0 1.2 1 0 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_9 PF13454.6 gi|568163545|ref|YP_008946902.1| - 0.1 12.6 1.6 0.15 12.0 0.2 2.0 2 0 0 2 2 2 0 FAD-NAD(P)-binding Trp_halogenase PF04820.14 gi|568163545|ref|YP_008946902.1| - 0.11 11.3 4.9 0.18 10.6 0.7 2.4 2 1 1 3 3 3 0 Tryptophan halogenase GMC_oxred_N PF00732.19 gi|568163545|ref|YP_008946902.1| - 0.14 11.5 0.1 0.31 10.4 0.0 1.5 2 0 0 2 2 2 0 GMC oxidoreductase Flavoprotein PF02441.19 gi|568163546|ref|YP_008946903.1| - 1e-24 87.1 0.0 1.3e-24 86.7 0.0 1.1 1 0 0 1 1 1 1 Flavoprotein tRNA_int_endo PF01974.17 gi|568163548|ref|YP_008946905.1| - 6.5e-27 93.4 0.0 1.3e-26 92.5 0.0 1.5 1 0 0 1 1 1 1 tRNA intron endonuclease, catalytic C-terminal domain tRNA_int_endo_N PF02778.14 gi|568163548|ref|YP_008946905.1| - 1.2e-21 76.1 0.2 4.9e-21 74.2 0.3 1.8 2 0 0 2 2 2 1 tRNA intron endonuclease, N-terminal domain PhoU_div PF01865.16 gi|568163549|ref|YP_008946906.1| - 3.3e-08 33.1 7.8 2.4e-07 30.3 2.0 2.1 1 1 0 2 2 2 2 Protein of unknown function DUF47 PhoU PF01895.19 gi|568163549|ref|YP_008946906.1| - 7.9e-06 26.3 10.5 0.00036 20.9 3.1 2.9 2 1 1 3 3 3 2 PhoU domain Vta1 PF04652.16 gi|568163549|ref|YP_008946906.1| - 0.0014 18.6 2.7 0.0017 18.4 0.5 1.9 1 1 1 2 2 2 1 Vta1 like Tropomyosin PF00261.20 gi|568163549|ref|YP_008946906.1| - 0.0025 17.3 2.0 0.012 15.0 0.7 2.0 1 1 1 2 2 2 1 Tropomyosin RmuC PF02646.16 gi|568163549|ref|YP_008946906.1| - 0.014 14.6 2.3 0.064 12.4 0.2 2.3 1 1 2 3 3 3 0 RmuC family DUF948 PF06103.11 gi|568163549|ref|YP_008946906.1| - 0.015 15.6 0.9 2.9 8.2 0.2 2.4 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) HrpJ PF07201.11 gi|568163549|ref|YP_008946906.1| - 0.022 15.1 0.7 0.047 14.0 0.2 1.8 2 0 0 2 2 2 0 HrpJ-like domain PriC PF07445.12 gi|568163549|ref|YP_008946906.1| - 0.026 14.5 1.4 0.095 12.6 0.1 2.1 1 1 0 2 2 2 0 Primosomal replication protein priC DUF1664 PF07889.12 gi|568163549|ref|YP_008946906.1| - 0.051 13.6 0.3 0.27 11.3 0.0 2.2 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) T4_tail_cap PF11091.8 gi|568163549|ref|YP_008946906.1| - 0.081 11.8 2.6 0.17 10.8 0.3 1.9 1 1 0 2 2 2 0 Tail-tube assembly protein DASH_Dad2 PF08654.10 gi|568163549|ref|YP_008946906.1| - 0.12 12.8 1.4 9 6.8 0.3 3.3 1 1 1 2 2 2 0 DASH complex subunit Dad2 Interferon PF00143.19 gi|568163549|ref|YP_008946906.1| - 0.19 11.9 1.9 0.41 10.8 0.6 1.8 2 0 0 2 2 2 0 Interferon alpha/beta domain Laminin_II PF06009.12 gi|568163549|ref|YP_008946906.1| - 0.54 10.3 7.2 2 8.4 0.1 2.8 2 1 1 3 3 3 0 Laminin Domain II Fib_alpha PF08702.10 gi|568163549|ref|YP_008946906.1| - 0.85 9.8 7.2 1.6 8.9 3.4 2.5 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Fmp27_WPPW PF10359.9 gi|568163550|ref|YP_008946907.1| - 0.037 12.9 0.3 0.046 12.6 0.3 1.1 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain EcoEI_R_C PF08463.10 gi|568163550|ref|YP_008946907.1| - 0.058 13.5 1.5 0.13 12.4 1.5 1.7 1 1 0 1 1 1 0 EcoEI R protein C-terminal G-gamma PF00631.22 gi|568163550|ref|YP_008946907.1| - 0.13 12.3 0.1 0.26 11.3 0.1 1.5 1 0 0 1 1 1 0 GGL domain DUF2513 PF10711.9 gi|568163550|ref|YP_008946907.1| - 0.15 12.4 2.1 7.3 6.9 0.2 2.4 1 1 1 2 2 2 0 Hypothetical protein (DUF2513) Molydop_binding PF01568.21 gi|568163551|ref|YP_008946908.1| - 0.00054 20.0 0.2 0.28 11.2 0.0 2.2 1 1 1 2 2 2 2 Molydopterin dinucleotide binding domain HGTP_anticodon PF03129.20 gi|568163552|ref|YP_008946909.1| - 4.7e-18 65.1 0.1 1.1e-17 63.9 0.1 1.7 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|568163552|ref|YP_008946909.1| - 7.3e-07 29.3 1.4 2.7e-06 27.5 0.5 2.5 2 1 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) YokU PF14122.6 gi|568163552|ref|YP_008946909.1| - 0.064 13.2 2.4 0.41 10.6 0.0 2.8 2 0 0 2 2 2 0 YokU-like protein, putative antitoxin Rad50_zn_hook PF04423.14 gi|568163552|ref|YP_008946909.1| - 0.13 12.1 2.3 1.3 9.0 0.1 2.6 2 0 0 2 2 2 0 Rad50 zinc hook motif Arginase PF00491.21 gi|568163553|ref|YP_008946910.1| - 8.1e-71 238.8 0.0 9.6e-71 238.5 0.0 1.0 1 0 0 1 1 1 1 Arginase family DNA_RNApol_7kD PF03604.13 gi|568163554|ref|YP_008946911.1| - 1.9e-06 27.5 4.7 3.9e-06 26.4 4.7 1.5 1 1 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit Zn-ribbon_8 PF09723.10 gi|568163554|ref|YP_008946911.1| - 0.0093 16.1 0.3 0.013 15.6 0.3 1.2 1 0 0 1 1 1 1 Zinc ribbon domain DUF2072 PF09845.9 gi|568163554|ref|YP_008946911.1| - 0.0095 16.2 0.2 0.0095 16.2 0.2 1.0 1 0 0 1 1 1 1 Zn-ribbon containing protein HypA PF01155.19 gi|568163554|ref|YP_008946911.1| - 0.013 15.5 0.1 0.013 15.5 0.1 1.0 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-ribbon_3 PF13248.6 gi|568163554|ref|YP_008946911.1| - 0.029 13.8 2.6 0.11 12.0 0.6 2.2 2 0 0 2 2 2 0 zinc-ribbon domain DZR PF12773.7 gi|568163554|ref|YP_008946911.1| - 0.03 14.3 0.4 0.068 13.2 0.4 1.5 1 1 0 1 1 1 0 Double zinc ribbon Zn_Tnp_IS1595 PF12760.7 gi|568163554|ref|YP_008946911.1| - 0.042 13.8 4.4 0.051 13.5 0.1 2.0 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|568163554|ref|YP_008946911.1| - 0.048 13.4 4.5 0.38 10.5 4.5 2.1 1 1 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_5 PF13719.6 gi|568163554|ref|YP_008946911.1| - 0.058 13.2 5.5 0.7 9.7 0.0 2.4 2 1 0 2 2 2 0 zinc-ribbon domain zf-C2H2 PF00096.26 gi|568163554|ref|YP_008946911.1| - 0.1 13.1 1.9 8.2 7.1 0.1 2.2 2 0 0 2 2 2 0 Zinc finger, C2H2 type OrfB_Zn_ribbon PF07282.11 gi|568163554|ref|YP_008946911.1| - 0.14 12.1 1.7 6.7 6.7 0.0 2.0 1 1 1 2 2 2 0 Putative transposase DNA-binding domain zf-BED PF02892.15 gi|568163554|ref|YP_008946911.1| - 0.14 12.2 2.1 3.3 7.8 0.1 2.1 1 1 1 2 2 2 0 BED zinc finger SUI1 PF01253.22 gi|568163555|ref|YP_008946912.1| - 9.9e-23 80.5 0.9 1.3e-22 80.1 0.9 1.1 1 0 0 1 1 1 1 Translation initiation factor SUI1 Img2 PF05046.14 gi|568163555|ref|YP_008946912.1| - 0.00036 20.8 1.0 0.00047 20.4 1.0 1.3 1 0 0 1 1 1 1 Mitochondrial large subunit ribosomal protein (Img2) TFIIB PF00382.19 gi|568163556|ref|YP_008946913.1| - 2.5e-35 120.4 5.4 2.8e-17 62.5 0.7 2.2 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|568163556|ref|YP_008946913.1| - 2.9e-11 42.7 0.4 5.5e-11 41.8 0.4 1.4 1 0 0 1 1 1 1 TFIIB zinc-binding HTH_AsnC-type PF13404.6 gi|568163556|ref|YP_008946913.1| - 1e-05 25.3 0.1 3.1e-05 23.7 0.1 1.9 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain Sigma70_r4 PF04545.16 gi|568163556|ref|YP_008946913.1| - 0.00015 21.2 3.8 0.00059 19.3 0.2 3.3 4 0 0 4 4 4 1 Sigma-70, region 4 Cyclin_C PF02984.19 gi|568163556|ref|YP_008946913.1| - 0.0006 19.9 0.1 0.39 10.8 0.0 2.3 2 0 0 2 2 2 2 Cyclin, C-terminal domain HTH_Tnp_ISL3 PF13542.6 gi|568163556|ref|YP_008946913.1| - 0.0013 18.1 0.1 0.062 12.7 0.0 3.2 3 1 1 4 4 4 1 Helix-turn-helix domain of transposase family ISL3 DUF3562 PF12085.8 gi|568163556|ref|YP_008946913.1| - 0.0027 17.3 0.6 0.69 9.6 0.1 2.5 2 0 0 2 2 2 1 Protein of unknown function (DUF3562) Sigma70_r4_2 PF08281.12 gi|568163556|ref|YP_008946913.1| - 0.0027 17.4 0.1 0.012 15.2 0.0 2.2 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_24 PF13412.6 gi|568163556|ref|YP_008946913.1| - 0.0027 17.2 0.1 0.011 15.3 0.1 2.1 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 gi|568163556|ref|YP_008946913.1| - 0.0055 16.6 0.2 0.012 15.6 0.2 1.6 1 0 0 1 1 1 1 HTH domain RB_B PF01857.20 gi|568163556|ref|YP_008946913.1| - 0.018 15.1 0.1 0.045 13.8 0.0 1.7 2 0 0 2 2 2 0 Retinoblastoma-associated protein B domain HTH_23 PF13384.6 gi|568163556|ref|YP_008946913.1| - 0.036 13.9 0.1 0.036 13.9 0.1 3.3 4 0 0 4 4 4 0 Homeodomain-like domain HTH_Crp_2 PF13545.6 gi|568163556|ref|YP_008946913.1| - 0.04 13.9 0.2 0.85 9.6 0.0 2.6 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain Cyclin_N PF00134.23 gi|568163556|ref|YP_008946913.1| - 0.099 12.4 0.4 2.3 8.0 0.2 2.2 2 0 0 2 2 2 0 Cyclin, N-terminal domain HHH PF00633.23 gi|568163556|ref|YP_008946913.1| - 0.15 12.0 0.1 6.5 6.8 0.0 2.8 2 0 0 2 2 2 0 Helix-hairpin-helix motif DUF131 PF01998.17 gi|568163557|ref|YP_008946914.1| - 1.6e-11 43.6 13.7 1.1e-10 41.0 13.7 2.0 1 1 0 1 1 1 1 Protein of unknown function DUF131 DUF2207 PF09972.9 gi|568163557|ref|YP_008946914.1| - 3.2 6.4 5.5 4.7 5.9 5.5 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) SSV1_ORF_D-335 PF07935.11 gi|568163558|ref|YP_008946915.1| - 2.7e-14 53.2 2.0 3.5e-14 52.8 2.0 1.2 1 0 0 1 1 1 1 ORF D-335-like protein Peptidase_M48 PF01435.18 gi|568163559|ref|YP_008946916.1| - 3.9e-29 101.8 0.0 7.6e-29 100.9 0.0 1.5 1 0 0 1 1 1 1 Peptidase family M48 LPG_synthase_TM PF03706.13 gi|568163559|ref|YP_008946916.1| - 0.13 11.7 15.5 0.021 14.4 2.1 2.1 2 0 0 2 2 2 0 Lysylphosphatidylglycerol synthase TM region Peptidase_M56 PF05569.11 gi|568163559|ref|YP_008946916.1| - 0.14 11.3 2.6 0.12 11.6 0.7 1.8 2 1 0 2 2 2 0 BlaR1 peptidase M56 DUF3899 PF13038.6 gi|568163559|ref|YP_008946916.1| - 0.2 12.2 0.3 0.2 12.2 0.3 2.9 3 1 0 3 3 3 0 Domain of unknown function (DUF3899) E1-E2_ATPase PF00122.20 gi|568163560|ref|YP_008946917.1| - 4.8e-54 182.6 0.9 1.1e-53 181.4 0.9 1.7 1 0 0 1 1 1 1 E1-E2 ATPase Hydrolase PF00702.26 gi|568163560|ref|YP_008946917.1| - 1.2e-30 107.3 1.7 1.2e-30 107.3 0.5 1.6 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HMA PF00403.26 gi|568163560|ref|YP_008946917.1| - 1.7e-15 57.2 8.8 2.9e-13 50.0 2.4 2.9 2 0 0 2 2 2 2 Heavy-metal-associated domain Hydrolase_3 PF08282.12 gi|568163560|ref|YP_008946917.1| - 2.8e-07 30.5 1.0 0.016 15.0 0.1 2.9 2 1 1 3 3 3 2 haloacid dehalogenase-like hydrolase NLPC_P60 PF00877.19 gi|568163560|ref|YP_008946917.1| - 0.022 14.8 0.0 0.64 10.1 0.0 2.4 2 0 0 2 2 2 0 NlpC/P60 family HAD_2 PF13419.6 gi|568163560|ref|YP_008946917.1| - 0.024 14.7 2.4 0.15 12.1 0.0 3.1 3 2 1 4 4 4 0 Haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|568163560|ref|YP_008946917.1| - 0.059 13.8 0.0 1.7 9.0 0.0 2.8 2 1 0 2 2 2 0 haloacid dehalogenase-like hydrolase DNA_ligase_OB PF03120.16 gi|568163560|ref|YP_008946917.1| - 0.077 12.9 0.6 0.69 9.8 0.2 2.6 2 0 0 2 2 2 0 NAD-dependent DNA ligase OB-fold domain Hydrolase_6 PF13344.6 gi|568163560|ref|YP_008946917.1| - 0.083 13.0 0.0 0.38 10.9 0.0 2.1 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase ACT_4 PF13291.6 gi|568163560|ref|YP_008946917.1| - 2.2 9.0 6.5 0.69 10.6 0.1 3.3 3 0 0 3 3 3 0 ACT domain YHS PF04945.13 gi|568163561|ref|YP_008946918.1| - 1.3e-20 73.2 3.4 1.4e-20 73.1 3.4 1.0 1 0 0 1 1 1 1 YHS domain Arc_trans_TRASH PF08394.10 gi|568163561|ref|YP_008946918.1| - 2.8e-05 24.3 2.1 4e-05 23.9 2.1 1.2 1 0 0 1 1 1 1 Archaeal TRASH domain zf-FCS PF06467.14 gi|568163561|ref|YP_008946918.1| - 0.0018 18.2 2.0 0.0027 17.6 2.0 1.4 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif FAP206 PF12018.8 gi|568163561|ref|YP_008946918.1| - 0.0085 15.6 0.1 0.0092 15.5 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF2116 PF09889.9 gi|568163561|ref|YP_008946918.1| - 0.16 12.0 1.9 0.49 10.4 1.9 1.8 1 1 0 1 1 1 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) Arc_trans_TRASH PF08394.10 gi|568163562|ref|YP_008946919.1| - 6.3e-20 71.2 8.8 1.2e-19 70.3 8.8 1.5 1 0 0 1 1 1 1 Archaeal TRASH domain HTH_11 PF08279.12 gi|568163562|ref|YP_008946919.1| - 4e-08 33.1 0.6 1e-07 31.8 0.6 1.7 1 0 0 1 1 1 1 HTH domain HTH_AsnC-type PF13404.6 gi|568163562|ref|YP_008946919.1| - 3e-06 27.0 0.1 5.3e-06 26.2 0.1 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain MarR_2 PF12802.7 gi|568163562|ref|YP_008946919.1| - 2.7e-05 24.0 0.0 4.3e-05 23.3 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|568163562|ref|YP_008946919.1| - 3.3e-05 23.3 0.5 3.3e-05 23.3 0.5 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|568163562|ref|YP_008946919.1| - 0.00014 21.7 0.2 0.00023 21.0 0.2 1.3 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|568163562|ref|YP_008946919.1| - 0.00044 20.1 0.1 0.00097 19.0 0.1 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_29 PF13551.6 gi|568163562|ref|YP_008946919.1| - 0.00077 19.4 0.0 0.0019 18.2 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn helix HTH_6 PF01418.17 gi|568163562|ref|YP_008946919.1| - 0.002 18.0 0.5 0.0043 17.0 0.5 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain, rpiR family HTH_23 PF13384.6 gi|568163562|ref|YP_008946919.1| - 0.004 16.9 0.1 0.0092 15.8 0.1 1.6 1 0 0 1 1 1 1 Homeodomain-like domain HTH_36 PF13730.6 gi|568163562|ref|YP_008946919.1| - 0.015 15.2 0.6 0.033 14.1 0.6 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain Penicillinase_R PF03965.16 gi|568163562|ref|YP_008946919.1| - 0.016 15.5 0.0 0.033 14.5 0.0 1.6 1 0 0 1 1 1 0 Penicillinase repressor HTH_20 PF12840.7 gi|568163562|ref|YP_008946919.1| - 0.019 15.0 1.0 0.038 14.0 0.0 2.0 3 0 0 3 3 2 0 Helix-turn-helix domain Mga PF05043.13 gi|568163562|ref|YP_008946919.1| - 0.032 14.8 0.8 0.069 13.7 0.2 1.8 2 0 0 2 2 2 0 Mga helix-turn-helix domain APG17 PF04108.12 gi|568163562|ref|YP_008946919.1| - 0.038 13.1 0.0 0.042 13.0 0.0 1.1 1 0 0 1 1 1 0 Autophagy protein Apg17 HTH_38 PF13936.6 gi|568163562|ref|YP_008946919.1| - 0.039 13.7 0.6 0.1 12.4 0.2 2.0 2 0 0 2 2 1 0 Helix-turn-helix domain HTH_7 PF02796.15 gi|568163562|ref|YP_008946919.1| - 0.05 13.7 0.1 0.15 12.2 0.1 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_27 PF13463.6 gi|568163562|ref|YP_008946919.1| - 0.072 13.6 0.1 0.12 12.9 0.1 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_5 PF01022.20 gi|568163562|ref|YP_008946919.1| - 0.082 12.8 0.1 0.19 11.6 0.1 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_22 PF13309.6 gi|568163562|ref|YP_008946919.1| - 0.088 12.9 1.4 0.11 12.6 0.1 1.8 2 0 0 2 2 2 0 HTH domain DUF2023 PF09633.10 gi|568163562|ref|YP_008946919.1| - 0.094 12.8 1.0 2.8 8.1 0.0 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF2023) Fe_dep_repress PF01325.19 gi|568163562|ref|YP_008946919.1| - 0.1 12.8 0.2 0.2 11.9 0.2 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain GntR PF00392.21 gi|568163562|ref|YP_008946919.1| - 0.14 11.8 0.0 0.3 10.7 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_10 PF04967.12 gi|568163562|ref|YP_008946919.1| - 0.26 11.1 2.2 0.72 9.7 0.6 2.4 3 0 0 3 3 3 0 HTH DNA binding domain DUF5405 PF17399.2 gi|568163563|ref|YP_008946920.1| - 0.0014 18.8 0.1 0.0016 18.7 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5405) AAA PF00004.29 gi|568163564|ref|YP_008946921.1| - 1.4e-76 255.2 0.0 4e-37 127.6 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|568163564|ref|YP_008946921.1| - 5.5e-16 58.7 0.0 9.9e-09 35.1 0.0 2.9 3 0 0 3 3 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 gi|568163564|ref|YP_008946921.1| - 5.7e-14 52.6 3.2 0.008 16.5 0.0 5.0 4 2 1 6 6 4 3 AAA domain AAA_5 PF07728.14 gi|568163564|ref|YP_008946921.1| - 2.3e-13 50.3 0.5 7.5e-05 22.7 0.1 4.0 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 gi|568163564|ref|YP_008946921.1| - 1.4e-12 48.3 0.0 6.7e-05 23.4 0.0 2.7 2 0 0 2 2 2 2 AAA domain AAA_14 PF13173.6 gi|568163564|ref|YP_008946921.1| - 2.8e-12 46.8 0.0 4.7e-06 26.7 0.0 3.1 2 1 1 3 3 2 2 AAA domain AAA_33 PF13671.6 gi|568163564|ref|YP_008946921.1| - 3.3e-12 46.8 0.0 4.4e-05 23.7 0.0 2.4 2 0 0 2 2 2 2 AAA domain TIP49 PF06068.13 gi|568163564|ref|YP_008946921.1| - 3.8e-12 46.1 0.1 5.8e-05 22.5 0.1 2.8 2 1 1 3 3 2 2 TIP49 P-loop domain AAA_16 PF13191.6 gi|568163564|ref|YP_008946921.1| - 8.6e-12 45.8 0.4 2.7e-05 24.6 0.0 3.7 2 2 0 2 2 2 2 AAA ATPase domain DUF815 PF05673.13 gi|568163564|ref|YP_008946921.1| - 6.5e-11 41.9 0.0 0.00015 21.0 0.0 2.4 2 0 0 2 2 2 2 Protein of unknown function (DUF815) AAA_lid_3 PF17862.1 gi|568163564|ref|YP_008946921.1| - 1.7e-10 40.6 0.0 0.00092 19.0 0.0 3.1 3 0 0 3 3 2 2 AAA+ lid domain AAA_2 PF07724.14 gi|568163564|ref|YP_008946921.1| - 3.6e-09 37.0 0.0 4e-05 23.8 0.0 2.9 2 1 0 2 2 2 2 AAA domain (Cdc48 subfamily) IstB_IS21 PF01695.17 gi|568163564|ref|YP_008946921.1| - 5.1e-09 36.1 0.0 0.0022 17.8 0.0 2.7 3 0 0 3 3 2 2 IstB-like ATP binding protein RNA_helicase PF00910.22 gi|568163564|ref|YP_008946921.1| - 6.8e-09 36.1 0.0 0.0023 18.3 0.0 3.1 3 0 0 3 3 2 2 RNA helicase AAA_24 PF13479.6 gi|568163564|ref|YP_008946921.1| - 8.8e-09 35.4 0.0 0.0011 18.8 0.0 2.6 2 1 0 2 2 2 2 AAA domain AAA_7 PF12775.7 gi|568163564|ref|YP_008946921.1| - 2.3e-08 33.8 0.1 0.006 16.1 0.1 3.1 2 1 0 2 2 2 2 P-loop containing dynein motor region Zeta_toxin PF06414.12 gi|568163564|ref|YP_008946921.1| - 2.8e-08 33.3 0.0 0.001 18.4 0.0 3.1 3 0 0 3 3 3 2 Zeta toxin AAA_28 PF13521.6 gi|568163564|ref|YP_008946921.1| - 3e-08 34.1 0.0 0.0078 16.5 0.0 2.5 2 0 0 2 2 2 2 AAA domain Cytidylate_kin PF02224.18 gi|568163564|ref|YP_008946921.1| - 1.3e-07 31.6 0.1 0.018 14.8 0.0 2.5 2 0 0 2 2 2 2 Cytidylate kinase Vps4_C PF09336.10 gi|568163564|ref|YP_008946921.1| - 1.6e-07 31.2 0.1 0.0039 17.2 0.0 2.9 2 0 0 2 2 2 2 Vps4 C terminal oligomerisation domain TsaE PF02367.17 gi|568163564|ref|YP_008946921.1| - 7.2e-07 29.2 0.0 0.031 14.3 0.0 2.3 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE Mg_chelatase PF01078.21 gi|568163564|ref|YP_008946921.1| - 9.4e-07 28.4 0.0 0.036 13.4 0.0 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI Parvo_NS1 PF01057.17 gi|568163564|ref|YP_008946921.1| - 1.4e-06 27.6 0.1 0.043 12.9 0.0 2.2 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 ABC_tran PF00005.27 gi|568163564|ref|YP_008946921.1| - 1.6e-06 28.7 0.0 0.078 13.5 0.0 2.5 2 0 0 2 2 2 2 ABC transporter Sigma54_activ_2 PF14532.6 gi|568163564|ref|YP_008946921.1| - 3.9e-06 27.0 0.0 0.082 13.0 0.0 3.5 2 1 0 2 2 2 2 Sigma-54 interaction domain SKI PF01202.22 gi|568163564|ref|YP_008946921.1| - 7.1e-06 26.2 0.2 0.19 11.8 0.0 2.8 3 0 0 3 3 2 2 Shikimate kinase AAA_19 PF13245.6 gi|568163564|ref|YP_008946921.1| - 1.3e-05 25.6 0.2 0.61 10.4 0.0 3.5 2 1 0 3 3 3 2 AAA domain TniB PF05621.11 gi|568163564|ref|YP_008946921.1| - 1.3e-05 24.7 2.7 0.069 12.6 0.0 4.1 4 0 0 4 4 4 1 Bacterial TniB protein AAA_3 PF07726.11 gi|568163564|ref|YP_008946921.1| - 1.5e-05 24.9 0.0 0.15 11.9 0.0 3.0 2 1 1 3 3 2 2 ATPase family associated with various cellular activities (AAA) AAA_17 PF13207.6 gi|568163564|ref|YP_008946921.1| - 2.1e-05 25.0 0.0 0.13 12.7 0.0 3.0 3 0 0 3 3 2 2 AAA domain CPT PF07931.12 gi|568163564|ref|YP_008946921.1| - 3.5e-05 23.7 0.0 0.092 12.6 0.0 2.3 2 0 0 2 2 2 2 Chloramphenicol phosphotransferase-like protein ATPase_2 PF01637.18 gi|568163564|ref|YP_008946921.1| - 3.6e-05 23.8 0.4 0.98 9.3 0.0 3.7 2 2 0 3 3 3 2 ATPase domain predominantly from Archaea AAA_25 PF13481.6 gi|568163564|ref|YP_008946921.1| - 4.2e-05 23.2 1.7 1.2 8.7 0.1 3.7 4 0 0 4 4 3 2 AAA domain Rad17 PF03215.15 gi|568163564|ref|YP_008946921.1| - 4.3e-05 23.5 0.1 0.43 10.5 0.0 3.2 3 1 0 3 3 2 2 Rad17 P-loop domain AAA_11 PF13086.6 gi|568163564|ref|YP_008946921.1| - 5e-05 23.2 0.0 0.21 11.3 0.0 2.4 2 0 0 2 2 2 2 AAA domain NTPase_1 PF03266.15 gi|568163564|ref|YP_008946921.1| - 5.9e-05 23.1 0.5 1 9.3 0.0 3.9 3 1 1 4 4 4 2 NTPase AAA_30 PF13604.6 gi|568163564|ref|YP_008946921.1| - 6.1e-05 22.8 0.1 0.62 9.8 0.0 2.8 2 1 0 2 2 2 2 AAA domain KTI12 PF08433.10 gi|568163564|ref|YP_008946921.1| - 7e-05 22.4 0.0 0.35 10.3 0.0 2.6 2 0 0 2 2 2 2 Chromatin associated protein KTI12 Bac_DnaA PF00308.18 gi|568163564|ref|YP_008946921.1| - 8.6e-05 22.5 0.0 0.094 12.5 0.0 3.2 2 1 0 2 2 2 1 Bacterial dnaA protein AAA_6 PF12774.7 gi|568163564|ref|YP_008946921.1| - 0.00015 20.9 0.0 0.23 10.4 0.0 2.3 2 0 0 2 2 2 2 Hydrolytic ATP binding site of dynein motor region Sigma54_activat PF00158.26 gi|568163564|ref|YP_008946921.1| - 0.00017 21.3 0.0 1.1 8.9 0.0 3.1 4 0 0 4 4 2 2 Sigma-54 interaction domain NACHT PF05729.12 gi|568163564|ref|YP_008946921.1| - 0.00018 21.5 0.5 0.95 9.4 0.0 3.3 3 1 1 4 4 3 2 NACHT domain PhoH PF02562.16 gi|568163564|ref|YP_008946921.1| - 0.00024 20.6 0.0 0.42 10.0 0.0 2.5 2 0 0 2 2 2 2 PhoH-like protein ATPase PF06745.13 gi|568163564|ref|YP_008946921.1| - 0.00025 20.4 3.5 2.9 7.2 0.1 4.3 2 2 2 4 4 4 0 KaiC NB-ARC PF00931.22 gi|568163564|ref|YP_008946921.1| - 0.0004 19.7 0.0 2 7.5 0.0 3.5 4 0 0 4 4 4 1 NB-ARC domain RsgA_GTPase PF03193.16 gi|568163564|ref|YP_008946921.1| - 0.00056 19.9 0.5 1.4 8.8 0.0 2.9 3 0 0 3 3 2 1 RsgA GTPase IPT PF01745.16 gi|568163564|ref|YP_008946921.1| - 0.001 18.5 0.1 0.29 10.5 0.0 2.3 2 0 0 2 2 2 1 Isopentenyl transferase PduV-EutP PF10662.9 gi|568163564|ref|YP_008946921.1| - 0.0014 18.4 0.0 2 8.2 0.0 2.5 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation MMR_HSR1 PF01926.23 gi|568163564|ref|YP_008946921.1| - 0.002 18.2 0.0 3 7.9 0.0 2.7 2 0 0 2 2 2 0 50S ribosome-binding GTPase Guanylate_kin PF00625.21 gi|568163564|ref|YP_008946921.1| - 0.0024 17.6 0.0 2.6 7.7 0.0 2.8 3 0 0 3 3 2 0 Guanylate kinase Hydin_ADK PF17213.3 gi|568163564|ref|YP_008946921.1| - 0.0026 18.1 0.1 1.7 8.9 0.0 2.5 2 0 0 2 2 2 1 Hydin Adenylate kinase-like domain ResIII PF04851.15 gi|568163564|ref|YP_008946921.1| - 0.0027 17.7 0.0 3.9 7.5 0.0 2.8 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit AAA_23 PF13476.6 gi|568163564|ref|YP_008946921.1| - 0.0036 17.8 0.7 5 7.6 0.1 3.0 3 1 0 3 3 2 0 AAA domain APS_kinase PF01583.20 gi|568163564|ref|YP_008946921.1| - 0.0048 16.8 0.0 2.2 8.1 0.0 2.5 2 0 0 2 2 2 1 Adenylylsulphate kinase 6PF2K PF01591.18 gi|568163564|ref|YP_008946921.1| - 0.005 16.2 0.1 0.15 11.4 0.0 2.4 2 0 0 2 2 2 1 6-phosphofructo-2-kinase Cytidylate_kin2 PF13189.6 gi|568163564|ref|YP_008946921.1| - 0.0061 16.7 0.0 1.6 8.8 0.0 2.8 3 0 0 3 3 2 1 Cytidylate kinase-like family DUF2075 PF09848.9 gi|568163564|ref|YP_008946921.1| - 0.0061 15.8 0.0 1.5 7.9 0.1 2.3 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) T2SSE PF00437.20 gi|568163564|ref|YP_008946921.1| - 0.0071 15.4 0.0 1.9 7.5 0.0 2.4 2 0 0 2 2 2 1 Type II/IV secretion system protein PPV_E1_C PF00519.17 gi|568163564|ref|YP_008946921.1| - 0.0082 15.0 0.0 2.9 6.6 0.0 2.3 2 0 0 2 2 2 0 Papillomavirus helicase Adeno_IVa2 PF02456.15 gi|568163564|ref|YP_008946921.1| - 0.0088 14.9 0.1 3.2 6.4 0.0 2.3 2 0 0 2 2 2 0 Adenovirus IVa2 protein KAP_NTPase PF07693.14 gi|568163564|ref|YP_008946921.1| - 0.0089 15.3 1.6 4.8 6.3 0.0 3.6 2 2 2 4 4 4 0 KAP family P-loop domain Roc PF08477.13 gi|568163564|ref|YP_008946921.1| - 0.012 15.8 0.0 6.4 7.0 0.0 2.7 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AAA_29 PF13555.6 gi|568163564|ref|YP_008946921.1| - 0.014 15.1 0.2 4.1 7.2 0.0 2.4 2 0 0 2 2 2 0 P-loop containing region of AAA domain SRP54 PF00448.22 gi|568163564|ref|YP_008946921.1| - 0.017 14.8 0.0 6.2 6.4 0.0 2.6 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain dNK PF01712.19 gi|568163564|ref|YP_008946921.1| - 0.019 14.8 0.1 1.2 8.9 0.0 2.5 2 0 0 2 2 2 0 Deoxynucleoside kinase MCM PF00493.23 gi|568163564|ref|YP_008946921.1| - 0.029 13.4 0.1 5.4 6.1 0.0 3.0 3 0 0 3 3 3 0 MCM P-loop domain Torsin PF06309.11 gi|568163564|ref|YP_008946921.1| - 0.035 14.2 0.0 5.2 7.2 0.0 2.3 2 0 0 2 2 2 0 Torsin ADK PF00406.22 gi|568163564|ref|YP_008946921.1| - 0.051 13.7 0.0 11 6.1 0.0 2.6 2 0 0 2 2 2 0 Adenylate kinase Viral_helicase1 PF01443.18 gi|568163564|ref|YP_008946921.1| - 0.087 12.5 0.0 14 5.3 0.0 2.3 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase SRPRB PF09439.10 gi|568163564|ref|YP_008946921.1| - 0.093 12.2 0.0 16 4.9 0.0 2.5 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit AAA_21 PF13304.6 gi|568163564|ref|YP_008946921.1| - 0.12 12.2 4.8 3 7.6 0.5 3.0 2 2 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system CLP1_P PF16575.5 gi|568163564|ref|YP_008946921.1| - 0.13 12.1 0.0 20 4.9 0.0 2.4 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop Gtr1_RagA PF04670.12 gi|568163564|ref|YP_008946921.1| - 0.13 11.6 0.1 20 4.5 0.0 2.9 3 0 0 3 3 2 0 Gtr1/RagA G protein conserved region ATP-synt_ab PF00006.25 gi|568163564|ref|YP_008946921.1| - 0.14 11.8 0.0 10 5.7 0.0 2.4 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain DEAD PF00270.29 gi|568163564|ref|YP_008946921.1| - 0.17 11.7 0.9 12 5.6 0.0 3.4 3 1 0 4 4 4 0 DEAD/DEAH box helicase cobW PF02492.19 gi|568163564|ref|YP_008946921.1| - 0.2 11.2 0.2 14 5.2 0.0 2.5 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain DUF2540 PF10802.8 gi|568163564|ref|YP_008946921.1| - 0.57 10.3 5.4 8.6 6.5 0.3 4.0 3 1 1 4 4 3 0 Protein of unknown function (DUF2540) SPW PF03779.14 gi|568163565|ref|YP_008946922.1| - 0.004 16.7 1.3 0.004 16.7 1.3 2.7 3 0 0 3 3 3 1 SPW repeat ABC_tran PF00005.27 gi|568163567|ref|YP_008946924.1| - 5.4e-30 104.7 0.1 2.2e-14 54.1 0.0 3.3 2 1 1 3 3 3 3 ABC transporter AAA_21 PF13304.6 gi|568163567|ref|YP_008946924.1| - 7.2e-15 55.6 8.8 0.0017 18.2 0.0 4.3 2 2 2 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|568163567|ref|YP_008946924.1| - 4.1e-08 33.6 0.0 0.0035 17.6 0.0 2.5 2 0 0 2 2 2 2 AAA domain NB-ARC PF00931.22 gi|568163567|ref|YP_008946924.1| - 4e-07 29.5 0.1 0.0052 16.0 0.1 2.5 2 0 0 2 2 2 2 NB-ARC domain AAA_29 PF13555.6 gi|568163567|ref|YP_008946924.1| - 3.3e-06 26.7 0.2 0.019 14.7 0.1 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_24 PF13479.6 gi|568163567|ref|YP_008946924.1| - 4.1e-06 26.7 0.4 0.047 13.4 0.0 2.8 3 0 0 3 3 2 2 AAA domain SRP54 PF00448.22 gi|568163567|ref|YP_008946924.1| - 5.1e-06 26.3 0.6 0.021 14.4 0.2 2.4 2 0 0 2 2 2 2 SRP54-type protein, GTPase domain SMC_N PF02463.19 gi|568163567|ref|YP_008946924.1| - 2.5e-05 23.8 5.9 0.098 12.1 0.2 3.8 3 1 0 4 4 4 2 RecF/RecN/SMC N terminal domain AAA_33 PF13671.6 gi|568163567|ref|YP_008946924.1| - 3e-05 24.2 0.0 0.068 13.3 0.0 2.5 2 1 0 2 2 2 2 AAA domain AAA PF00004.29 gi|568163567|ref|YP_008946924.1| - 4.8e-05 23.8 2.7 0.029 14.8 0.1 3.1 2 2 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 gi|568163567|ref|YP_008946924.1| - 7.5e-05 22.7 2.1 0.11 12.4 0.0 2.5 2 1 0 2 2 2 2 NACHT domain RsgA_GTPase PF03193.16 gi|568163567|ref|YP_008946924.1| - 8.2e-05 22.6 0.1 0.063 13.2 0.0 2.4 2 0 0 2 2 2 1 RsgA GTPase AAA_14 PF13173.6 gi|568163567|ref|YP_008946924.1| - 9.9e-05 22.4 3.6 0.062 13.3 0.1 3.3 2 2 1 3 3 3 2 AAA domain AAA_7 PF12775.7 gi|568163567|ref|YP_008946924.1| - 0.00013 21.5 0.0 0.56 9.7 0.0 2.3 2 0 0 2 2 2 2 P-loop containing dynein motor region MMR_HSR1 PF01926.23 gi|568163567|ref|YP_008946924.1| - 0.00014 21.9 0.5 0.37 10.9 0.0 2.7 3 0 0 3 3 2 2 50S ribosome-binding GTPase MobB PF03205.14 gi|568163567|ref|YP_008946924.1| - 0.00015 21.6 3.4 0.21 11.5 0.2 2.7 2 0 0 2 2 2 2 Molybdopterin guanine dinucleotide synthesis protein B Roc PF08477.13 gi|568163567|ref|YP_008946924.1| - 0.00017 21.8 0.1 0.18 12.0 0.0 2.5 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase AAA_16 PF13191.6 gi|568163567|ref|YP_008946924.1| - 0.00024 21.5 0.0 0.66 10.3 0.0 2.6 3 0 0 3 3 2 2 AAA ATPase domain AAA_18 PF13238.6 gi|568163567|ref|YP_008946924.1| - 0.00028 21.4 0.2 1.2 9.7 0.1 2.7 2 1 0 2 2 2 2 AAA domain ATPase_2 PF01637.18 gi|568163567|ref|YP_008946924.1| - 0.00029 20.8 1.7 0.28 11.0 0.0 2.8 2 1 0 2 2 2 2 ATPase domain predominantly from Archaea TsaE PF02367.17 gi|568163567|ref|YP_008946924.1| - 0.00031 20.7 0.1 1.2 9.1 0.0 2.5 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE NTPase_1 PF03266.15 gi|568163567|ref|YP_008946924.1| - 0.00035 20.5 5.2 0.28 11.1 0.2 3.6 2 1 1 3 3 3 2 NTPase AAA_19 PF13245.6 gi|568163567|ref|YP_008946924.1| - 0.00035 20.9 0.4 1.1 9.5 0.0 3.3 2 1 0 2 2 2 1 AAA domain Pox_A32 PF04665.12 gi|568163567|ref|YP_008946924.1| - 0.00048 19.7 0.1 0.68 9.3 0.1 2.5 2 1 0 2 2 2 2 Poxvirus A32 protein AAA_30 PF13604.6 gi|568163567|ref|YP_008946924.1| - 0.00049 19.9 0.1 1.1 8.9 0.0 2.3 2 0 0 2 2 2 2 AAA domain AAA_15 PF13175.6 gi|568163567|ref|YP_008946924.1| - 0.00055 19.8 19.1 0.0036 17.1 0.9 3.2 1 1 1 2 2 2 1 AAA ATPase domain AAA_23 PF13476.6 gi|568163567|ref|YP_008946924.1| - 0.0011 19.6 11.7 0.53 10.7 7.4 3.2 1 1 1 2 2 2 2 AAA domain cobW PF02492.19 gi|568163567|ref|YP_008946924.1| - 0.0012 18.5 0.6 0.073 12.6 0.0 2.3 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain RNA_helicase PF00910.22 gi|568163567|ref|YP_008946924.1| - 0.0019 18.6 0.0 1 9.8 0.0 2.8 2 0 0 2 2 2 1 RNA helicase PduV-EutP PF10662.9 gi|568163567|ref|YP_008946924.1| - 0.0025 17.6 1.1 1.3 8.7 0.0 2.8 3 0 0 3 3 3 1 Ethanolamine utilisation - propanediol utilisation Viral_helicase1 PF01443.18 gi|568163567|ref|YP_008946924.1| - 0.0027 17.5 0.0 1.1 9.0 0.0 2.3 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase AAA_5 PF07728.14 gi|568163567|ref|YP_008946924.1| - 0.0039 17.2 0.3 1.8 8.6 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) Zeta_toxin PF06414.12 gi|568163567|ref|YP_008946924.1| - 0.0053 16.1 0.0 0.36 10.1 0.0 2.4 2 0 0 2 2 2 1 Zeta toxin G-alpha PF00503.20 gi|568163567|ref|YP_008946924.1| - 0.014 14.6 0.4 1.3 8.1 0.1 2.3 2 1 0 2 2 2 0 G-protein alpha subunit AAA_28 PF13521.6 gi|568163567|ref|YP_008946924.1| - 0.023 14.9 0.0 1.8 8.8 0.0 2.4 2 0 0 2 2 2 0 AAA domain AAA_17 PF13207.6 gi|568163567|ref|YP_008946924.1| - 0.027 14.9 1.3 2.1 8.8 0.0 2.9 3 1 0 3 3 2 0 AAA domain GTP_EFTU PF00009.27 gi|568163567|ref|YP_008946924.1| - 0.031 13.8 0.0 0.72 9.3 0.0 2.3 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain TrwB_AAD_bind PF10412.9 gi|568163567|ref|YP_008946924.1| - 0.039 12.9 0.1 1.9 7.3 0.0 2.5 3 0 0 3 3 3 0 Type IV secretion-system coupling protein DNA-binding domain AAA_25 PF13481.6 gi|568163567|ref|YP_008946924.1| - 0.044 13.3 0.0 6.2 6.3 0.0 2.4 2 0 0 2 2 2 0 AAA domain PhoH PF02562.16 gi|568163567|ref|YP_008946924.1| - 0.051 13.0 0.0 1.3 8.5 0.0 2.4 2 0 0 2 2 2 0 PhoH-like protein IstB_IS21 PF01695.17 gi|568163567|ref|YP_008946924.1| - 0.085 12.6 0.1 7 6.3 0.0 2.5 2 0 0 2 2 2 0 IstB-like ATP binding protein Ca_bind_SSO6904 PF18249.1 gi|568163567|ref|YP_008946924.1| - 0.11 12.9 2.5 1.4 9.3 0.1 2.6 2 1 0 2 2 2 0 Calcium binding protein SSO6904 Septin PF00735.18 gi|568163567|ref|YP_008946924.1| - 0.16 11.2 2.6 10 5.3 0.0 2.9 3 1 0 3 3 3 0 Septin SbcCD_C PF13558.6 gi|568163567|ref|YP_008946924.1| - 0.19 12.0 0.0 1.1 9.6 0.0 2.2 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit DUF4752 PF15944.5 gi|568163568|ref|YP_008946925.1| - 0.061 13.4 2.1 0.2 11.8 0.1 2.8 2 2 1 3 3 3 0 Domain of unknown function (DUF4752) DUF5486 PF17588.2 gi|568163568|ref|YP_008946925.1| - 0.1 12.5 0.2 0.23 11.4 0.2 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5486) HTH_45 PF14947.6 gi|568163569|ref|YP_008946926.1| - 2.6e-28 97.8 5.4 3.1e-28 97.6 5.4 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix DUF4364 PF14277.6 gi|568163569|ref|YP_008946926.1| - 0.00018 21.3 0.4 0.0002 21.2 0.4 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4364) Topoisom_bac PF01131.20 gi|568163569|ref|YP_008946926.1| - 0.015 14.3 0.3 0.019 14.0 0.3 1.1 1 0 0 1 1 1 0 DNA topoisomerase DUF2119 PF09892.9 gi|568163569|ref|YP_008946926.1| - 0.018 14.4 0.3 0.022 14.1 0.3 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2119) DUF505 PF04458.12 gi|568163569|ref|YP_008946926.1| - 0.019 13.4 1.8 0.021 13.2 1.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF505) Ammonium_transp PF00909.21 gi|568163570|ref|YP_008946927.1| - 5e-95 318.5 24.9 6e-95 318.3 24.9 1.1 1 0 0 1 1 1 1 Ammonium Transporter Family Metallophos PF00149.28 gi|568163571|ref|YP_008946928.1| - 3.9e-26 92.8 0.8 5.3e-26 92.4 0.8 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|568163571|ref|YP_008946928.1| - 6.8e-06 26.4 0.0 9.3e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain MR_MLE_C PF13378.6 gi|568163572|ref|YP_008946929.1| - 2.6e-55 187.4 0.0 3.8e-55 186.8 0.0 1.2 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 gi|568163572|ref|YP_008946929.1| - 8.2e-15 55.0 0.0 1.9e-14 53.9 0.0 1.6 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Sugar_tr PF00083.24 gi|568163573|ref|YP_008946930.1| - 2.5e-55 188.2 22.5 3.3e-55 187.8 22.5 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|568163573|ref|YP_008946930.1| - 7.3e-31 107.4 36.1 3.8e-25 88.6 31.5 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily BT1 PF03092.16 gi|568163573|ref|YP_008946930.1| - 0.14 10.4 6.5 0.2 9.8 2.9 2.4 2 0 0 2 2 2 0 BT1 family Usp PF00582.26 gi|568163574|ref|YP_008946931.1| - 2.6e-26 92.8 0.3 3.6e-26 92.4 0.3 1.2 1 0 0 1 1 1 1 Universal stress protein family Amidohydro_1 PF01979.20 gi|568163575|ref|YP_008946932.1| - 2.5e-55 188.2 0.0 2.9e-55 188.0 0.0 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|568163575|ref|YP_008946932.1| - 2.3e-15 57.0 0.0 1.9e-11 44.1 0.0 2.1 2 0 0 2 2 2 2 Amidohydrolase family A_deaminase PF00962.22 gi|568163575|ref|YP_008946932.1| - 0.0014 18.0 0.0 0.0024 17.2 0.0 1.4 1 1 0 1 1 1 1 Adenosine/AMP deaminase SNCAIP_SNCA_bd PF16700.5 gi|568163575|ref|YP_008946932.1| - 0.077 12.7 0.1 0.16 11.7 0.1 1.5 1 0 0 1 1 1 0 Synphilin-1 alpha-Synuclein-binding domain UPF0147 PF03685.13 gi|568163576|ref|YP_008946933.1| - 4.6e-37 125.9 2.2 5.1e-37 125.8 2.2 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0147) UPF0253 PF06786.12 gi|568163576|ref|YP_008946933.1| - 0.012 15.9 0.1 0.22 11.8 0.0 2.2 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0253) HEAT_2 PF13646.6 gi|568163576|ref|YP_008946933.1| - 0.036 14.4 0.2 0.098 13.1 0.2 1.7 1 1 0 1 1 1 0 HEAT repeats Auto_anti-p27 PF06677.12 gi|568163577|ref|YP_008946934.1| - 1.8e-14 53.6 0.2 2.6e-14 53.1 0.2 1.3 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DUF592 PF04574.13 gi|568163577|ref|YP_008946934.1| - 0.018 14.8 1.1 0.024 14.4 1.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF592) DNA_ligase_ZBD PF03119.16 gi|568163577|ref|YP_008946934.1| - 0.13 12.3 0.5 0.26 11.3 0.5 1.5 1 0 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain Thymidylate_kin PF02223.17 gi|568163578|ref|YP_008946935.1| - 3.3e-40 137.8 0.1 3.8e-40 137.5 0.1 1.0 1 0 0 1 1 1 1 Thymidylate kinase dNK PF01712.19 gi|568163578|ref|YP_008946935.1| - 1.6e-06 28.2 3.7 7.3e-05 22.7 0.5 2.1 2 0 0 2 2 2 2 Deoxynucleoside kinase AAA_18 PF13238.6 gi|568163578|ref|YP_008946935.1| - 7.8e-05 23.2 0.0 0.00029 21.4 0.0 2.1 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.6 gi|568163578|ref|YP_008946935.1| - 0.003 17.8 0.0 0.0039 17.4 0.0 1.3 1 0 0 1 1 1 1 AAA domain SKI PF01202.22 gi|568163578|ref|YP_008946935.1| - 0.0044 17.2 0.1 0.51 10.4 0.1 2.1 2 0 0 2 2 2 1 Shikimate kinase NB-ARC PF00931.22 gi|568163578|ref|YP_008946935.1| - 0.049 12.8 0.0 0.091 11.9 0.0 1.5 1 0 0 1 1 1 0 NB-ARC domain Gtr1_RagA PF04670.12 gi|568163578|ref|YP_008946935.1| - 0.053 12.9 1.5 0.41 10.0 0.1 2.1 2 0 0 2 2 2 0 Gtr1/RagA G protein conserved region AAA_33 PF13671.6 gi|568163578|ref|YP_008946935.1| - 0.059 13.5 0.0 0.52 10.5 0.0 2.5 1 1 1 2 2 2 0 AAA domain AAA_17 PF13207.6 gi|568163578|ref|YP_008946935.1| - 0.073 13.5 0.1 4.7 7.6 0.0 2.6 2 1 1 3 3 3 0 AAA domain CLP1_P PF16575.5 gi|568163579|ref|YP_008946936.1| - 1.2e-23 83.9 0.0 1.7e-23 83.4 0.0 1.2 1 0 0 1 1 1 1 mRNA cleavage and polyadenylation factor CLP1 P-loop MMR_HSR1 PF01926.23 gi|568163579|ref|YP_008946936.1| - 0.12 12.5 0.2 0.26 11.4 0.2 1.8 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_24 PF13479.6 gi|568163581|ref|YP_008946938.1| - 1.4e-07 31.4 0.1 2.1e-07 30.9 0.1 1.2 1 0 0 1 1 1 1 AAA domain ATPase PF06745.13 gi|568163581|ref|YP_008946938.1| - 6.9e-05 22.3 1.1 0.0059 16.0 0.1 2.0 1 1 1 2 2 2 2 KaiC AAA_25 PF13481.6 gi|568163581|ref|YP_008946938.1| - 0.0011 18.6 0.0 0.75 9.3 0.0 2.2 1 1 0 2 2 2 2 AAA domain RecA PF00154.21 gi|568163581|ref|YP_008946938.1| - 0.0046 16.4 0.0 0.0066 15.9 0.0 1.2 1 0 0 1 1 1 1 recA bacterial DNA recombination protein AAA PF00004.29 gi|568163581|ref|YP_008946938.1| - 0.0051 17.2 0.1 0.0064 16.9 0.1 1.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|568163581|ref|YP_008946938.1| - 0.0061 17.0 0.0 0.0084 16.5 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain ABC_tran PF00005.27 gi|568163581|ref|YP_008946938.1| - 0.011 16.2 0.1 0.016 15.7 0.1 1.3 1 1 0 1 1 1 0 ABC transporter Rad51 PF08423.11 gi|568163581|ref|YP_008946938.1| - 0.014 14.7 1.3 0.16 11.2 0.1 2.3 1 1 0 2 2 2 0 Rad51 DUF2075 PF09848.9 gi|568163581|ref|YP_008946938.1| - 0.016 14.4 0.1 0.023 14.0 0.1 1.3 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) RNA_helicase PF00910.22 gi|568163581|ref|YP_008946938.1| - 0.026 14.9 0.1 0.063 13.7 0.1 1.6 1 1 0 1 1 1 0 RNA helicase AAA_30 PF13604.6 gi|568163581|ref|YP_008946938.1| - 0.044 13.5 0.0 0.064 13.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|568163581|ref|YP_008946938.1| - 0.048 13.9 1.5 0.34 11.2 1.5 2.1 1 1 0 1 1 1 0 AAA domain Delta_lysin PF05372.11 gi|568163581|ref|YP_008946938.1| - 0.056 12.7 0.4 0.16 11.3 0.4 1.8 1 0 0 1 1 1 0 Delta lysin family AAA_11 PF13086.6 gi|568163581|ref|YP_008946938.1| - 0.082 12.7 0.0 0.1 12.4 0.0 1.1 1 0 0 1 1 1 0 AAA domain MOZART2 PF12926.7 gi|568163581|ref|YP_008946938.1| - 0.091 12.4 0.1 0.17 11.5 0.1 1.4 1 0 0 1 1 1 0 Mitotic-spindle organizing gamma-tubulin ring associated AAA_18 PF13238.6 gi|568163581|ref|YP_008946938.1| - 0.11 13.0 0.0 0.17 12.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain DnaB_C PF03796.15 gi|568163581|ref|YP_008946938.1| - 0.15 11.4 0.5 9.1 5.5 0.3 2.0 1 1 1 2 2 2 0 DnaB-like helicase C terminal domain CarS-like PF01864.17 gi|568163582|ref|YP_008946939.1| - 6.7e-41 140.2 8.9 3.6e-40 137.8 8.9 1.8 1 1 0 1 1 1 1 CDP-archaeol synthase CTP_transf_1 PF01148.20 gi|568163582|ref|YP_008946939.1| - 0.0034 17.2 2.4 0.0034 17.2 2.4 2.0 2 0 0 2 2 2 1 Cytidylyltransferase family DUF347 PF03988.12 gi|568163582|ref|YP_008946939.1| - 0.021 15.0 0.1 0.021 15.0 0.1 2.9 3 1 0 3 3 3 0 Repeat of Unknown Function (DUF347) Acyl_transf_3 PF01757.22 gi|568163583|ref|YP_008946940.1| - 0.0098 15.0 7.0 0.011 14.8 7.0 1.1 1 0 0 1 1 1 1 Acyltransferase family MHC2-interact PF09307.10 gi|568163583|ref|YP_008946940.1| - 0.088 12.8 0.3 0.16 12.0 0.3 1.4 1 0 0 1 1 1 0 CLIP, MHC2 interacting DUF3112 PF11309.8 gi|568163583|ref|YP_008946940.1| - 0.34 10.3 14.1 0.51 9.8 2.9 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3112) TRIQK PF15168.6 gi|568163583|ref|YP_008946940.1| - 1.1 9.2 0.1 1.1 9.2 0.1 2.6 2 1 1 3 3 3 0 Triple QxxK/R motif-containing protein family MARVEL PF01284.23 gi|568163583|ref|YP_008946940.1| - 1.5 8.8 9.6 1.9 8.5 9.6 1.1 1 0 0 1 1 1 0 Membrane-associating domain DUF4131 PF13567.6 gi|568163583|ref|YP_008946940.1| - 3.6 7.2 7.0 0.29 10.8 1.5 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) S_4TM PF18159.1 gi|568163583|ref|YP_008946940.1| - 4.5 6.5 8.3 0.62 9.3 1.1 2.0 1 1 1 2 2 2 0 SMODS-associating 4TM effector domain FumaraseC_C PF10415.9 gi|568163584|ref|YP_008946941.1| - 0.059 13.8 0.1 0.086 13.3 0.1 1.2 1 0 0 1 1 1 0 Fumarase C C-terminus MCM PF00493.23 gi|568163585|ref|YP_008946942.1| - 2.6e-97 324.3 0.0 4.5e-97 323.5 0.0 1.4 1 0 0 1 1 1 1 MCM P-loop domain MCM_OB PF17207.3 gi|568163585|ref|YP_008946942.1| - 3.2e-33 114.3 0.0 5.8e-33 113.4 0.0 1.4 1 0 0 1 1 1 1 MCM OB domain MCM_lid PF17855.1 gi|568163585|ref|YP_008946942.1| - 3.7e-28 97.8 0.4 8.3e-28 96.6 0.4 1.6 1 0 0 1 1 1 1 MCM AAA-lid domain MCM_N PF14551.6 gi|568163585|ref|YP_008946942.1| - 1e-18 67.8 1.1 2.8e-18 66.4 1.1 1.7 1 0 0 1 1 1 1 MCM N-terminal domain AAA_5 PF07728.14 gi|568163585|ref|YP_008946942.1| - 4.3e-08 33.3 0.1 1.4e-07 31.6 0.0 1.9 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 gi|568163585|ref|YP_008946942.1| - 1e-06 28.3 0.1 0.00011 21.7 0.1 2.4 1 1 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 gi|568163585|ref|YP_008946942.1| - 1.7e-05 24.7 0.0 3.6e-05 23.6 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 gi|568163585|ref|YP_008946942.1| - 2.5e-05 24.1 0.1 0.00037 20.3 0.1 2.3 1 1 0 1 1 1 1 Sigma-54 interaction domain DUF4325 PF14213.6 gi|568163585|ref|YP_008946942.1| - 0.0024 17.5 0.2 0.013 15.2 0.0 2.4 2 0 0 2 2 2 1 STAS-like domain of unknown function (DUF4325) EAP30 PF04157.16 gi|568163585|ref|YP_008946942.1| - 0.0068 15.7 0.0 0.015 14.6 0.0 1.5 1 0 0 1 1 1 1 EAP30/Vps36 family DUF3987 PF13148.6 gi|568163585|ref|YP_008946942.1| - 0.025 13.6 0.0 3.3 6.6 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3987) ANT PF03374.14 gi|568163585|ref|YP_008946942.1| - 0.05 13.9 0.0 0.12 12.7 0.0 1.6 1 0 0 1 1 1 0 Phage antirepressor protein KilAC domain Sld5 PF05916.11 gi|568163586|ref|YP_008946943.1| - 4e-10 40.1 0.7 5.5e-10 39.7 0.7 1.2 1 0 0 1 1 1 1 GINS complex protein Polbeta PF18765.1 gi|568163586|ref|YP_008946943.1| - 0.51 10.5 3.2 0.82 9.8 0.9 2.1 2 0 0 2 2 2 0 Polymerase beta, Nucleotidyltransferase THUMP PF02926.17 gi|568163587|ref|YP_008946944.1| - 1.2e-10 41.7 1.2 1.5e-10 41.3 1.2 1.1 1 0 0 1 1 1 1 THUMP domain Cdc6_C PF09079.11 gi|568163588|ref|YP_008946945.1| - 1.6e-16 60.0 0.0 4.4e-16 58.6 0.0 1.8 1 0 0 1 1 1 1 CDC6, C terminal winged helix domain AAA_22 PF13401.6 gi|568163588|ref|YP_008946945.1| - 4.1e-15 56.3 0.1 9.4e-15 55.1 0.1 1.5 1 0 0 1 1 1 1 AAA domain TniB PF05621.11 gi|568163588|ref|YP_008946945.1| - 0.00013 21.5 0.0 0.00024 20.6 0.0 1.4 1 0 0 1 1 1 1 Bacterial TniB protein AAA_16 PF13191.6 gi|568163588|ref|YP_008946945.1| - 0.0037 17.7 0.7 0.094 13.1 0.2 2.8 2 1 0 2 2 2 1 AAA ATPase domain NB-ARC PF00931.22 gi|568163588|ref|YP_008946945.1| - 0.0057 15.9 0.0 0.011 14.9 0.0 1.4 1 0 0 1 1 1 1 NB-ARC domain NACHT PF05729.12 gi|568163588|ref|YP_008946945.1| - 0.043 13.7 0.0 0.084 12.8 0.0 1.5 1 0 0 1 1 1 0 NACHT domain AAA_7 PF12775.7 gi|568163588|ref|YP_008946945.1| - 0.071 12.6 0.0 0.19 11.2 0.0 1.7 2 0 0 2 2 2 0 P-loop containing dynein motor region AIG1 PF04548.16 gi|568163588|ref|YP_008946945.1| - 0.11 11.8 0.0 0.23 10.8 0.0 1.5 1 0 0 1 1 1 0 AIG1 family DUF2075 PF09848.9 gi|568163588|ref|YP_008946945.1| - 0.18 11.0 0.0 0.26 10.5 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) TrmB PF01978.19 gi|568163589|ref|YP_008946946.1| - 0.00042 20.1 0.3 0.0005 19.9 0.3 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Rrf2 PF02082.20 gi|568163589|ref|YP_008946946.1| - 0.0011 19.2 0.1 0.0014 18.9 0.1 1.2 1 0 0 1 1 1 1 Transcriptional regulator HTH_45 PF14947.6 gi|568163589|ref|YP_008946946.1| - 0.015 15.3 0.2 0.019 14.9 0.2 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix Urocanase_N PF17391.2 gi|568163589|ref|YP_008946946.1| - 0.015 15.0 0.0 0.017 14.8 0.0 1.0 1 0 0 1 1 1 0 Urocanase N-terminal domain FtsK_gamma PF09397.10 gi|568163589|ref|YP_008946946.1| - 0.046 13.5 0.1 0.066 13.0 0.1 1.3 1 0 0 1 1 1 0 Ftsk gamma domain MarR PF01047.22 gi|568163589|ref|YP_008946946.1| - 0.046 13.7 0.0 0.073 13.0 0.0 1.3 1 0 0 1 1 1 0 MarR family MoaC PF01967.21 gi|568163590|ref|YP_008946947.1| - 1.4e-48 164.4 2.8 1.6e-48 164.3 2.8 1.0 1 0 0 1 1 1 1 MoaC family AAA PF00004.29 gi|568163591|ref|YP_008946948.1| - 1.5e-18 67.5 0.2 8e-17 61.9 0.0 2.9 2 1 1 3 3 3 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|568163591|ref|YP_008946948.1| - 8.9e-11 41.8 0.0 1.8e-10 40.8 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 gi|568163591|ref|YP_008946948.1| - 2.4e-08 34.1 0.0 1.1e-07 31.9 0.0 2.1 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) Rad17 PF03215.15 gi|568163591|ref|YP_008946948.1| - 1.1e-07 32.0 0.4 5.3e-06 26.5 0.0 2.7 2 1 0 2 2 2 1 Rad17 P-loop domain DUF815 PF05673.13 gi|568163591|ref|YP_008946948.1| - 4.1e-07 29.4 0.0 1.5e-06 27.6 0.0 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF815) AAA_14 PF13173.6 gi|568163591|ref|YP_008946948.1| - 6.5e-07 29.4 0.0 5.1e-06 26.6 0.0 2.3 1 1 1 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|568163591|ref|YP_008946948.1| - 7.3e-07 29.7 0.0 3.2e-06 27.6 0.0 2.2 2 1 0 2 2 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|568163591|ref|YP_008946948.1| - 1.4e-06 28.6 0.1 3.4e-05 24.1 0.0 3.1 2 1 0 2 2 2 1 AAA domain AAA_18 PF13238.6 gi|568163591|ref|YP_008946948.1| - 5e-06 27.1 0.2 4.1e-05 24.1 0.0 2.7 3 0 0 3 3 1 1 AAA domain AAA_assoc_2 PF16193.5 gi|568163591|ref|YP_008946948.1| - 5.7e-06 26.6 0.1 2.1e-05 24.7 0.0 2.1 2 0 0 2 2 1 1 AAA C-terminal domain AAA_2 PF07724.14 gi|568163591|ref|YP_008946948.1| - 7.6e-05 22.9 0.0 0.00044 20.4 0.0 2.2 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_17 PF13207.6 gi|568163591|ref|YP_008946948.1| - 7.8e-05 23.1 0.0 0.0011 19.4 0.0 2.6 3 0 0 3 3 2 1 AAA domain IstB_IS21 PF01695.17 gi|568163591|ref|YP_008946948.1| - 0.00019 21.2 0.0 0.00064 19.5 0.0 1.9 1 1 0 1 1 1 1 IstB-like ATP binding protein AAA_33 PF13671.6 gi|568163591|ref|YP_008946948.1| - 0.00038 20.6 0.0 0.00094 19.4 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.6 gi|568163591|ref|YP_008946948.1| - 0.00041 20.0 0.0 0.0017 18.0 0.0 1.9 2 0 0 2 2 2 1 AAA domain ATPase_2 PF01637.18 gi|568163591|ref|YP_008946948.1| - 0.00063 19.7 2.4 0.00098 19.1 0.1 2.6 3 1 0 3 3 2 1 ATPase domain predominantly from Archaea AAA_24 PF13479.6 gi|568163591|ref|YP_008946948.1| - 0.00066 19.4 0.0 0.0021 17.8 0.0 2.0 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 gi|568163591|ref|YP_008946948.1| - 0.001 19.6 0.2 0.021 15.4 0.0 2.9 3 0 0 3 3 3 1 ABC transporter AAA_28 PF13521.6 gi|568163591|ref|YP_008946948.1| - 0.0011 19.2 0.0 0.0064 16.7 0.0 2.2 3 0 0 3 3 2 1 AAA domain RNA_helicase PF00910.22 gi|568163591|ref|YP_008946948.1| - 0.0013 19.1 0.0 0.005 17.2 0.0 2.1 2 0 0 2 2 1 1 RNA helicase NACHT PF05729.12 gi|568163591|ref|YP_008946948.1| - 0.0018 18.2 0.2 0.048 13.6 0.0 3.0 3 1 0 4 4 3 1 NACHT domain NB-ARC PF00931.22 gi|568163591|ref|YP_008946948.1| - 0.0025 17.1 0.0 0.0065 15.7 0.0 1.7 1 0 0 1 1 1 1 NB-ARC domain Parvo_NS1 PF01057.17 gi|568163591|ref|YP_008946948.1| - 0.0044 16.2 0.1 0.047 12.8 0.0 2.1 2 0 0 2 2 2 1 Parvovirus non-structural protein NS1 TsaE PF02367.17 gi|568163591|ref|YP_008946948.1| - 0.0054 16.7 0.0 0.0096 15.9 0.0 1.4 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE RsgA_GTPase PF03193.16 gi|568163591|ref|YP_008946948.1| - 0.006 16.5 0.0 0.015 15.2 0.0 1.6 1 0 0 1 1 1 1 RsgA GTPase AFG1_ATPase PF03969.16 gi|568163591|ref|YP_008946948.1| - 0.0082 15.1 0.2 4.9 5.9 0.0 3.1 4 0 0 4 4 4 0 AFG1-like ATPase ATPase PF06745.13 gi|568163591|ref|YP_008946948.1| - 0.011 15.1 0.3 0.29 10.4 0.0 2.9 3 1 1 4 4 4 0 KaiC TniB PF05621.11 gi|568163591|ref|YP_008946948.1| - 0.011 15.1 0.0 0.69 9.3 0.0 3.2 2 1 1 3 3 3 0 Bacterial TniB protein RFC1 PF08519.12 gi|568163591|ref|YP_008946948.1| - 0.015 15.5 0.0 0.028 14.6 0.0 1.4 1 0 0 1 1 1 0 Replication factor RFC1 C terminal domain NTPase_1 PF03266.15 gi|568163591|ref|YP_008946948.1| - 0.015 15.2 0.0 0.22 11.4 0.0 2.6 2 1 0 2 2 2 0 NTPase Mg_chelatase PF01078.21 gi|568163591|ref|YP_008946948.1| - 0.016 14.6 0.0 0.026 13.9 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI DNA_pol3_delta PF06144.13 gi|568163591|ref|YP_008946948.1| - 0.024 14.4 0.4 0.47 10.2 0.0 2.9 3 0 0 3 3 3 0 DNA polymerase III, delta subunit PPV_E1_C PF00519.17 gi|568163591|ref|YP_008946948.1| - 0.029 13.2 0.0 0.085 11.7 0.0 1.6 2 0 0 2 2 2 0 Papillomavirus helicase AAA_7 PF12775.7 gi|568163591|ref|YP_008946948.1| - 0.03 13.9 0.0 0.065 12.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region DNA_pol3_delta2 PF13177.6 gi|568163591|ref|YP_008946948.1| - 0.03 14.1 0.0 0.75 9.6 0.0 2.7 2 1 1 3 3 3 0 DNA polymerase III, delta subunit Sigma54_activat PF00158.26 gi|568163591|ref|YP_008946948.1| - 0.036 13.8 0.0 0.11 12.1 0.0 1.8 1 1 1 2 2 2 0 Sigma-54 interaction domain TIP49 PF06068.13 gi|568163591|ref|YP_008946948.1| - 0.04 13.1 0.0 0.071 12.3 0.0 1.4 1 0 0 1 1 1 0 TIP49 P-loop domain Sigma54_activ_2 PF14532.6 gi|568163591|ref|YP_008946948.1| - 0.046 13.8 0.0 0.12 12.5 0.0 1.7 1 1 0 1 1 1 0 Sigma-54 interaction domain AAA_3 PF07726.11 gi|568163591|ref|YP_008946948.1| - 0.049 13.5 0.0 0.15 11.9 0.0 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) MMR_HSR1 PF01926.23 gi|568163591|ref|YP_008946948.1| - 0.11 12.5 0.0 0.33 11.0 0.0 1.9 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_11 PF13086.6 gi|568163591|ref|YP_008946948.1| - 0.13 12.1 0.7 0.64 9.7 0.0 2.2 3 0 0 3 3 3 0 AAA domain AAA_19 PF13245.6 gi|568163591|ref|YP_008946948.1| - 0.13 12.6 0.1 0.88 9.9 0.0 2.3 3 0 0 3 3 2 0 AAA domain SRP54 PF00448.22 gi|568163591|ref|YP_008946948.1| - 0.14 11.7 0.0 0.34 10.5 0.0 1.6 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_30 PF13604.6 gi|568163591|ref|YP_008946948.1| - 0.16 11.7 0.0 0.45 10.2 0.0 1.8 1 1 0 1 1 1 0 AAA domain Hydin_ADK PF17213.3 gi|568163591|ref|YP_008946948.1| - 0.22 11.8 0.9 0.5 10.6 0.0 1.9 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain AAA_23 PF13476.6 gi|568163591|ref|YP_008946948.1| - 0.39 11.2 0.0 0.39 11.2 0.0 2.9 2 2 1 3 3 2 0 AAA domain Rep_fac_C PF08542.11 gi|568163592|ref|YP_008946949.1| - 3.7e-23 81.7 1.3 1.4e-22 79.8 0.1 2.6 3 1 0 3 3 2 1 Replication factor C C-terminal domain AAA PF00004.29 gi|568163592|ref|YP_008946949.1| - 1.5e-16 61.1 0.0 3.2e-16 59.9 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DNA_pol3_delta2 PF13177.6 gi|568163592|ref|YP_008946949.1| - 6.6e-14 52.0 0.1 1.3e-09 38.0 0.2 2.3 1 1 1 2 2 2 2 DNA polymerase III, delta subunit RuvB_N PF05496.12 gi|568163592|ref|YP_008946949.1| - 2e-07 30.9 0.0 6.7e-07 29.2 0.0 2.0 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain Rad17 PF03215.15 gi|568163592|ref|YP_008946949.1| - 3.8e-07 30.2 0.0 8.9e-07 29.0 0.0 1.7 2 0 0 2 2 1 1 Rad17 P-loop domain AAA_14 PF13173.6 gi|568163592|ref|YP_008946949.1| - 1.3e-06 28.5 0.3 5.6e-05 23.2 0.0 2.4 1 1 1 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|568163592|ref|YP_008946949.1| - 1.2e-05 25.8 0.0 0.021 15.2 0.0 2.4 1 1 1 2 2 2 2 AAA ATPase domain ResIII PF04851.15 gi|568163592|ref|YP_008946949.1| - 1.3e-05 25.3 0.0 0.00015 21.9 0.0 2.1 1 1 1 2 2 2 1 Type III restriction enzyme, res subunit AAA_3 PF07726.11 gi|568163592|ref|YP_008946949.1| - 1.4e-05 25.0 0.0 2.5e-05 24.1 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|568163592|ref|YP_008946949.1| - 1.5e-05 25.3 0.5 0.15 12.3 0.0 2.9 2 1 1 3 3 2 2 AAA domain AAA_24 PF13479.6 gi|568163592|ref|YP_008946949.1| - 6e-05 22.9 0.0 0.00024 20.9 0.0 1.9 2 0 0 2 2 2 1 AAA domain TIP49 PF06068.13 gi|568163592|ref|YP_008946949.1| - 7.4e-05 22.1 0.0 0.00046 19.5 0.0 2.2 1 1 0 1 1 1 1 TIP49 P-loop domain DNA_pol3_delta PF06144.13 gi|568163592|ref|YP_008946949.1| - 0.0001 22.1 0.1 0.00034 20.5 0.2 1.8 2 0 0 2 2 1 1 DNA polymerase III, delta subunit AAA_18 PF13238.6 gi|568163592|ref|YP_008946949.1| - 0.00013 22.6 0.0 0.0009 19.8 0.0 2.3 2 1 1 3 3 2 1 AAA domain AAA_assoc_2 PF16193.5 gi|568163592|ref|YP_008946949.1| - 0.00054 20.3 0.0 0.0016 18.7 0.0 1.9 1 0 0 1 1 1 1 AAA C-terminal domain AAA_30 PF13604.6 gi|568163592|ref|YP_008946949.1| - 0.00071 19.3 0.0 0.0074 16.0 0.0 2.2 2 1 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 gi|568163592|ref|YP_008946949.1| - 0.00073 19.3 0.0 0.0013 18.5 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_11 PF13086.6 gi|568163592|ref|YP_008946949.1| - 0.00081 19.3 0.0 0.0019 18.0 0.0 1.5 1 1 0 1 1 1 1 AAA domain TniB PF05621.11 gi|568163592|ref|YP_008946949.1| - 0.00089 18.7 0.1 0.064 12.6 0.0 2.3 2 0 0 2 2 2 1 Bacterial TniB protein ATPase_2 PF01637.18 gi|568163592|ref|YP_008946949.1| - 0.001 19.1 0.1 0.0023 17.9 0.1 1.6 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea Mg_chelatase PF01078.21 gi|568163592|ref|YP_008946949.1| - 0.0017 17.8 0.0 0.1 12.0 0.0 2.4 2 1 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 gi|568163592|ref|YP_008946949.1| - 0.0021 18.1 0.1 0.011 15.7 0.0 2.3 2 1 0 2 2 1 1 AAA domain (dynein-related subfamily) AAA_7 PF12775.7 gi|568163592|ref|YP_008946949.1| - 0.003 17.1 0.0 0.005 16.4 0.0 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region FtsK_SpoIIIE PF01580.18 gi|568163592|ref|YP_008946949.1| - 0.0038 16.6 0.0 0.039 13.3 0.0 2.6 3 1 1 4 4 4 1 FtsK/SpoIIIE family PhoH PF02562.16 gi|568163592|ref|YP_008946949.1| - 0.0048 16.4 0.0 0.39 10.1 0.0 2.4 2 0 0 2 2 2 1 PhoH-like protein DUF815 PF05673.13 gi|568163592|ref|YP_008946949.1| - 0.0058 15.8 0.0 0.0094 15.1 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_25 PF13481.6 gi|568163592|ref|YP_008946949.1| - 0.0084 15.7 0.7 0.043 13.4 0.2 2.3 2 2 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|568163592|ref|YP_008946949.1| - 0.0092 16.1 0.2 0.024 14.8 0.2 2.0 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.6 gi|568163592|ref|YP_008946949.1| - 0.0094 16.3 0.2 0.26 11.6 0.1 2.7 2 1 0 2 2 2 1 AAA domain T2SSE PF00437.20 gi|568163592|ref|YP_008946949.1| - 0.011 14.8 0.0 0.022 13.8 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein Viral_helicase1 PF01443.18 gi|568163592|ref|YP_008946949.1| - 0.015 15.1 0.0 0.024 14.4 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase DUF2075 PF09848.9 gi|568163592|ref|YP_008946949.1| - 0.015 14.5 0.1 0.13 11.5 0.1 2.1 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Phage_T4_Ndd PF06591.11 gi|568163592|ref|YP_008946949.1| - 0.016 15.0 0.1 0.065 13.0 0.0 1.8 1 1 1 2 2 2 0 T4-like phage nuclear disruption protein (Ndd) Sigma54_activat PF00158.26 gi|568163592|ref|YP_008946949.1| - 0.016 14.9 0.0 0.46 10.2 0.0 2.2 2 0 0 2 2 2 0 Sigma-54 interaction domain RNA_helicase PF00910.22 gi|568163592|ref|YP_008946949.1| - 0.032 14.6 0.0 0.12 12.7 0.0 2.1 1 1 0 1 1 1 0 RNA helicase AAA_28 PF13521.6 gi|568163592|ref|YP_008946949.1| - 0.032 14.5 0.0 0.084 13.1 0.0 1.7 1 1 0 1 1 1 0 AAA domain Sigma54_activ_2 PF14532.6 gi|568163592|ref|YP_008946949.1| - 0.048 13.8 0.1 0.37 10.9 0.1 2.1 1 1 0 1 1 1 0 Sigma-54 interaction domain DEAD PF00270.29 gi|568163592|ref|YP_008946949.1| - 0.074 12.8 0.7 16 5.2 0.0 2.7 2 1 1 3 3 3 0 DEAD/DEAH box helicase KTI12 PF08433.10 gi|568163592|ref|YP_008946949.1| - 0.075 12.5 0.0 0.19 11.1 0.0 1.7 2 0 0 2 2 2 0 Chromatin associated protein KTI12 PBP PF01161.20 gi|568163593|ref|YP_008946950.1| - 4.1e-34 117.7 0.0 4.8e-34 117.5 0.0 1.0 1 0 0 1 1 1 1 Phosphatidylethanolamine-binding protein DNAPolymera_Pol PF11590.8 gi|568163593|ref|YP_008946950.1| - 0.2 11.6 0.0 0.35 10.8 0.0 1.4 1 0 0 1 1 1 0 DNA polymerase catalytic subunit Pol Proteasome PF00227.26 gi|568163594|ref|YP_008946951.1| - 7.4e-52 175.6 0.3 8.3e-52 175.4 0.3 1.0 1 0 0 1 1 1 1 Proteasome subunit TGF_beta_GS PF08515.12 gi|568163594|ref|YP_008946951.1| - 0.42 10.2 2.7 0.7 9.4 0.2 2.3 2 0 0 2 2 2 0 Transforming growth factor beta type I GS-motif Amidase PF01425.21 gi|568163595|ref|YP_008946952.1| - 4.2e-86 289.7 0.3 7.7e-66 222.9 0.6 2.0 2 0 0 2 2 2 2 Amidase ADH_N PF08240.12 gi|568163596|ref|YP_008946953.1| - 2.2e-27 95.1 0.1 4.1e-27 94.2 0.1 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|568163596|ref|YP_008946953.1| - 1.9e-20 73.1 0.1 2.9e-20 72.6 0.1 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|568163596|ref|YP_008946953.1| - 1.7e-08 35.6 0.0 3.1e-08 34.7 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase LDcluster4 PF18306.1 gi|568163596|ref|YP_008946953.1| - 6.9e-05 22.5 0.8 0.00011 21.8 0.8 1.3 1 0 0 1 1 1 1 SLOG cluster4 family AlaDh_PNT_C PF01262.21 gi|568163596|ref|YP_008946953.1| - 0.0051 16.1 1.5 0.0085 15.4 1.5 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Eno-Rase_NADH_b PF12242.8 gi|568163596|ref|YP_008946953.1| - 0.013 15.2 0.8 0.025 14.3 0.8 1.5 1 0 0 1 1 1 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase E1-N PF14463.6 gi|568163596|ref|YP_008946953.1| - 0.021 14.6 0.1 0.047 13.5 0.1 1.5 1 0 0 1 1 1 0 E1 N-terminal domain Biotin_carb_N PF00289.22 gi|568163596|ref|YP_008946953.1| - 0.089 13.3 0.1 0.49 11.0 0.0 2.1 2 0 0 2 2 2 0 Biotin carboxylase, N-terminal domain Ribosomal_L17 PF01196.19 gi|568163596|ref|YP_008946953.1| - 0.13 13.2 0.0 0.34 11.8 0.0 1.7 2 0 0 2 2 2 0 Ribosomal protein L17 TP_methylase PF00590.20 gi|568163598|ref|YP_008946956.1| - 3.7e-47 161.0 0.1 4.6e-47 160.7 0.1 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases YHS PF04945.13 gi|568163599|ref|YP_008946957.1| - 2.3e-20 72.4 2.9 2.5e-20 72.3 2.9 1.0 1 0 0 1 1 1 1 YHS domain Arc_trans_TRASH PF08394.10 gi|568163599|ref|YP_008946957.1| - 2.1e-05 24.8 2.1 2.7e-05 24.4 2.1 1.2 1 0 0 1 1 1 1 Archaeal TRASH domain zf-FCS PF06467.14 gi|568163599|ref|YP_008946957.1| - 0.00025 20.9 1.1 0.0003 20.6 1.1 1.2 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif FAP206 PF12018.8 gi|568163599|ref|YP_008946957.1| - 0.00048 19.7 0.1 0.00053 19.6 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function DUF2116 PF09889.9 gi|568163599|ref|YP_008946957.1| - 0.069 13.2 0.2 0.31 11.1 0.1 1.8 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) NosL PF05573.12 gi|568163599|ref|YP_008946957.1| - 0.093 13.1 0.2 0.096 13.0 0.2 1.1 1 0 0 1 1 1 0 NosL FAD_binding_5 PF00941.21 gi|568163600|ref|YP_008946958.1| - 4.9e-48 163.1 0.0 7e-48 162.6 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain in molybdopterin dehydrogenase CO_deh_flav_C PF03450.17 gi|568163600|ref|YP_008946958.1| - 1.1e-27 96.2 0.3 1.7e-27 95.6 0.3 1.3 1 0 0 1 1 1 1 CO dehydrogenase flavoprotein C-terminal domain Fer2_2 PF01799.20 gi|568163601|ref|YP_008946959.1| - 2.7e-34 117.0 0.5 1.9e-33 114.3 0.0 2.1 2 0 0 2 2 2 1 [2Fe-2S] binding domain Fer2 PF00111.27 gi|568163601|ref|YP_008946959.1| - 3.6e-07 30.1 1.0 3.6e-07 30.1 1.0 2.0 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 gi|568163601|ref|YP_008946959.1| - 0.00024 21.1 0.8 0.00049 20.1 0.8 1.6 1 1 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain NTP_transf_3 PF12804.7 gi|568163602|ref|YP_008946960.1| - 6.1e-33 114.4 0.0 7.7e-33 114.1 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|568163602|ref|YP_008946960.1| - 2.7e-07 30.6 0.0 4.5e-07 29.8 0.0 1.3 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CofC PF01983.16 gi|568163602|ref|YP_008946960.1| - 0.00012 21.3 0.2 0.00019 20.7 0.2 1.3 1 1 0 1 1 1 1 Guanylyl transferase CofC like CTP_transf_3 PF02348.19 gi|568163602|ref|YP_008946960.1| - 0.0053 16.7 0.0 0.0067 16.4 0.0 1.2 1 0 0 1 1 1 1 Cytidylyltransferase COXG PF06240.13 gi|568163603|ref|YP_008946961.1| - 3.5e-40 137.0 0.0 3.9e-40 136.8 0.0 1.0 1 0 0 1 1 1 1 Carbon monoxide dehydrogenase subunit G (CoxG) Polyketide_cyc PF03364.20 gi|568163603|ref|YP_008946961.1| - 8.9e-06 25.9 0.0 1.4e-05 25.3 0.0 1.4 1 1 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc2 PF10604.9 gi|568163603|ref|YP_008946961.1| - 0.024 14.9 0.0 0.026 14.8 0.0 1.4 1 1 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport DUF4923 PF16270.5 gi|568163603|ref|YP_008946961.1| - 0.024 14.4 0.0 6.7 6.5 0.0 2.7 1 1 2 3 3 3 0 Lipocalin-like domain (DUF4923) GTP_EFTU PF00009.27 gi|568163604|ref|YP_008946962.1| - 1.4e-22 80.2 0.0 2.5e-22 79.4 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 gi|568163604|ref|YP_008946962.1| - 4.2e-06 27.0 0.1 1.3e-05 25.5 0.1 1.9 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain MMR_HSR1 PF01926.23 gi|568163604|ref|YP_008946962.1| - 1.5e-05 25.1 0.0 6.7e-05 22.9 0.0 2.1 2 1 0 2 2 2 1 50S ribosome-binding GTPase PduV-EutP PF10662.9 gi|568163604|ref|YP_008946962.1| - 0.00013 21.7 1.0 3.3 7.4 0.0 3.5 2 1 1 3 3 3 3 Ethanolamine utilisation - propanediol utilisation RsgA_GTPase PF03193.16 gi|568163604|ref|YP_008946962.1| - 0.0021 18.0 1.6 0.22 11.4 0.1 2.6 2 0 0 2 2 2 2 RsgA GTPase GTP_EFTU_D2 PF03144.25 gi|568163604|ref|YP_008946962.1| - 0.0029 18.0 2.2 0.0053 17.1 0.8 2.3 2 0 0 2 2 2 1 Elongation factor Tu domain 2 AlbA_2 PF04326.14 gi|568163604|ref|YP_008946962.1| - 0.037 14.4 4.7 0.27 11.6 0.3 3.1 3 1 0 3 3 3 0 Putative DNA-binding domain zf-ZPR1 PF03367.13 gi|568163605|ref|YP_008946963.1| - 2e-28 99.3 0.0 5e-28 98.0 0.0 1.6 1 1 0 1 1 1 1 ZPR1 zinc-finger domain Zn_Tnp_IS1595 PF12760.7 gi|568163605|ref|YP_008946963.1| - 0.023 14.7 0.1 0.044 13.8 0.1 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Lar_restr_allev PF14354.6 gi|568163605|ref|YP_008946963.1| - 0.039 14.3 0.1 0.069 13.5 0.1 1.4 1 0 0 1 1 1 0 Restriction alleviation protein Lar ArsA_HSP20 PF17886.1 gi|568163606|ref|YP_008946964.1| - 4.8e-11 42.0 0.0 7.3e-11 41.5 0.0 1.3 1 0 0 1 1 1 1 HSP20-like domain found in ArsA HSP20 PF00011.21 gi|568163606|ref|YP_008946964.1| - 2.5e-10 40.4 1.3 7.9e-09 35.6 1.3 2.2 1 1 0 1 1 1 1 Hsp20/alpha crystallin family DUF3788 PF12663.7 gi|568163606|ref|YP_008946964.1| - 0.024 14.6 0.0 0.052 13.5 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3788) PIH1_CS PF18201.1 gi|568163606|ref|YP_008946964.1| - 0.1 13.0 0.0 0.15 12.5 0.0 1.2 1 0 0 1 1 1 0 PIH1 CS-like domain Glyoxalase_4 PF13669.6 gi|568163607|ref|YP_008946965.1| - 7e-22 77.8 0.0 8.4e-22 77.5 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.6 gi|568163607|ref|YP_008946965.1| - 8.9e-11 42.2 0.0 1.1e-10 42.0 0.0 1.2 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase PF00903.25 gi|568163607|ref|YP_008946965.1| - 3.7e-09 36.9 0.1 1.3e-08 35.1 0.1 1.8 1 1 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_5 PF14696.6 gi|568163607|ref|YP_008946965.1| - 0.098 12.8 0.0 0.17 12.1 0.0 1.4 1 1 0 1 1 1 0 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal MM_CoA_mutase PF01642.22 gi|568163608|ref|YP_008946966.1| - 2.2e-211 702.9 0.0 2.5e-211 702.7 0.0 1.0 1 0 0 1 1 1 1 Methylmalonyl-CoA mutase Met_asp_mut_E PF06368.11 gi|568163608|ref|YP_008946966.1| - 0.027 13.0 0.1 0.037 12.5 0.1 1.2 1 0 0 1 1 1 0 Methylaspartate mutase E chain (MutE) Pribosyltran PF00156.27 gi|568163609|ref|YP_008946967.1| - 1.2e-23 83.4 0.1 1.6e-23 83.0 0.1 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Phosphodiest PF01663.22 gi|568163610|ref|YP_008946968.1| - 2e-18 67.1 5.5 7e-18 65.3 5.5 1.7 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase PglZ PF08665.12 gi|568163610|ref|YP_008946968.1| - 3.5e-07 30.5 0.9 1.5e-06 28.5 0.1 2.2 1 1 1 3 3 3 1 PglZ domain Metalloenzyme PF01676.18 gi|568163610|ref|YP_008946968.1| - 6.8e-06 25.6 0.3 1.3e-05 24.7 0.3 1.4 1 0 0 1 1 1 1 Metalloenzyme superfamily DAO PF01266.24 gi|568163611|ref|YP_008946970.1| - 6.8e-15 55.5 0.0 5.4e-14 52.5 0.0 2.3 1 1 0 1 1 1 1 FAD dependent oxidoreductase Amino_oxidase PF01593.24 gi|568163611|ref|YP_008946970.1| - 3.6e-14 52.9 0.0 1.5e-13 50.9 0.0 1.9 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 gi|568163611|ref|YP_008946970.1| - 7.9e-13 48.4 0.6 2.3e-12 46.9 0.2 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|568163611|ref|YP_008946970.1| - 1.3e-09 37.7 0.1 1.9e-05 24.0 0.0 2.5 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|568163611|ref|YP_008946970.1| - 3.8e-09 37.0 1.2 0.00015 22.2 0.4 2.8 3 0 0 3 3 2 2 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|568163611|ref|YP_008946970.1| - 7.6e-08 31.9 1.9 9.1e-07 28.4 0.5 2.2 2 0 0 2 2 2 1 Thi4 family FAD_binding_2 PF00890.24 gi|568163611|ref|YP_008946970.1| - 2.2e-07 30.3 2.2 0.00063 18.9 1.6 2.6 3 0 0 3 3 3 2 FAD binding domain FAD_oxidored PF12831.7 gi|568163611|ref|YP_008946970.1| - 8.5e-06 25.4 0.3 1.8e-05 24.3 0.0 1.6 2 0 0 2 2 2 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|568163611|ref|YP_008946970.1| - 1e-05 24.5 0.4 0.00097 17.9 0.3 2.2 2 0 0 2 2 2 1 HI0933-like protein FAD_binding_3 PF01494.19 gi|568163611|ref|YP_008946970.1| - 1.2e-05 24.7 0.2 2.1e-05 23.9 0.2 1.4 1 0 0 1 1 1 1 FAD binding domain GDI PF00996.18 gi|568163611|ref|YP_008946970.1| - 0.00089 17.9 0.3 0.51 8.8 0.1 2.2 2 0 0 2 2 2 2 GDP dissociation inhibitor Lycopene_cycl PF05834.12 gi|568163611|ref|YP_008946970.1| - 0.0031 16.6 0.6 0.037 13.1 0.2 2.3 2 0 0 2 2 2 1 Lycopene cyclase protein Trp_halogenase PF04820.14 gi|568163611|ref|YP_008946970.1| - 0.0039 16.1 1.1 0.02 13.8 0.3 2.1 2 0 0 2 2 2 1 Tryptophan halogenase GIDA PF01134.22 gi|568163611|ref|YP_008946970.1| - 0.0058 15.8 0.8 0.0058 15.8 0.8 2.6 2 1 1 3 3 3 1 Glucose inhibited division protein A Pyr_redox_3 PF13738.6 gi|568163611|ref|YP_008946970.1| - 0.15 11.3 2.8 0.31 10.2 1.1 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase XdhC_C PF13478.6 gi|568163611|ref|YP_008946970.1| - 0.16 12.4 0.0 2.8 8.4 0.0 2.3 2 0 0 2 2 2 0 XdhC Rossmann domain AAA PF00004.29 gi|568163612|ref|YP_008946971.1| - 5.6e-84 279.2 0.0 8.7e-41 139.4 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|568163612|ref|YP_008946971.1| - 9.7e-27 92.5 4.9 1.7e-14 53.3 0.7 2.9 2 0 0 2 2 2 2 AAA+ lid domain AAA_2 PF07724.14 gi|568163612|ref|YP_008946971.1| - 1.2e-16 61.3 0.0 7.2e-09 36.0 0.0 3.0 3 0 0 3 3 2 2 AAA domain (Cdc48 subfamily) AAA_14 PF13173.6 gi|568163612|ref|YP_008946971.1| - 1e-13 51.4 0.0 1.7e-06 28.1 0.0 3.1 3 0 0 3 3 2 2 AAA domain AAA_5 PF07728.14 gi|568163612|ref|YP_008946971.1| - 1.4e-12 47.8 0.5 2.9e-05 24.1 0.6 3.9 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|568163612|ref|YP_008946971.1| - 3.4e-12 47.1 0.1 0.00039 20.8 0.0 4.3 3 2 0 4 4 3 2 AAA ATPase domain RuvB_N PF05496.12 gi|568163612|ref|YP_008946971.1| - 6.9e-12 45.4 0.0 1.1e-05 25.3 0.0 2.6 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 gi|568163612|ref|YP_008946971.1| - 4.8e-11 43.1 2.5 0.00062 20.1 0.0 4.9 3 2 1 4 4 3 2 AAA domain AAA_18 PF13238.6 gi|568163612|ref|YP_008946971.1| - 1.9e-10 41.4 0.0 0.0003 21.3 0.0 2.8 2 0 0 2 2 2 2 AAA domain TIP49 PF06068.13 gi|568163612|ref|YP_008946971.1| - 1.5e-09 37.5 0.0 4.2e-05 22.9 0.0 2.5 2 0 0 2 2 2 2 TIP49 P-loop domain AAA_33 PF13671.6 gi|568163612|ref|YP_008946971.1| - 2e-09 37.7 0.0 0.00031 20.9 0.0 2.6 2 0 0 2 2 2 2 AAA domain RNA_helicase PF00910.22 gi|568163612|ref|YP_008946971.1| - 7.9e-09 35.9 0.0 0.004 17.5 0.0 3.1 2 1 0 2 2 2 2 RNA helicase Vps4_C PF09336.10 gi|568163612|ref|YP_008946971.1| - 1.3e-08 34.8 0.0 7.9e-05 22.6 0.0 3.1 2 0 0 2 2 2 2 Vps4 C terminal oligomerisation domain Rad17 PF03215.15 gi|568163612|ref|YP_008946971.1| - 2.1e-08 34.3 0.1 0.012 15.5 0.0 3.2 2 2 0 2 2 2 2 Rad17 P-loop domain IstB_IS21 PF01695.17 gi|568163612|ref|YP_008946971.1| - 6e-08 32.6 0.0 0.011 15.5 0.0 2.6 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_17 PF13207.6 gi|568163612|ref|YP_008946971.1| - 1.2e-07 32.3 0.3 0.017 15.5 0.0 3.4 3 0 0 3 3 2 2 AAA domain AAA_3 PF07726.11 gi|568163612|ref|YP_008946971.1| - 1.5e-07 31.4 0.1 0.0018 18.1 0.2 2.8 2 1 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 gi|568163612|ref|YP_008946971.1| - 5.6e-07 29.9 0.0 0.05 13.8 0.0 2.7 2 0 0 2 2 2 2 AAA domain TsaE PF02367.17 gi|568163612|ref|YP_008946971.1| - 9.1e-07 28.9 0.0 0.012 15.6 0.0 2.4 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE NACHT PF05729.12 gi|568163612|ref|YP_008946971.1| - 2.6e-06 27.5 0.6 0.17 11.8 0.1 3.6 2 2 1 3 3 3 2 NACHT domain Mg_chelatase PF01078.21 gi|568163612|ref|YP_008946971.1| - 4.6e-06 26.2 3.5 0.0093 15.4 0.5 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_25 PF13481.6 gi|568163612|ref|YP_008946971.1| - 5.8e-06 26.0 1.2 0.035 13.7 0.6 3.3 2 1 0 2 2 2 1 AAA domain AAA_7 PF12775.7 gi|568163612|ref|YP_008946971.1| - 6.6e-06 25.7 0.0 0.1 12.1 0.0 2.5 2 0 0 2 2 2 2 P-loop containing dynein motor region AAA_24 PF13479.6 gi|568163612|ref|YP_008946971.1| - 1.5e-05 24.8 0.8 0.061 13.0 0.1 3.2 3 1 0 3 3 3 2 AAA domain Viral_helicase1 PF01443.18 gi|568163612|ref|YP_008946971.1| - 7.8e-05 22.5 0.0 0.17 11.6 0.0 2.4 2 0 0 2 2 2 2 Viral (Superfamily 1) RNA helicase ABC_tran PF00005.27 gi|568163612|ref|YP_008946971.1| - 0.00016 22.2 0.1 0.39 11.2 0.0 2.9 2 1 0 2 2 2 1 ABC transporter Sigma54_activat PF00158.26 gi|568163612|ref|YP_008946971.1| - 0.00016 21.4 0.1 0.99 9.1 0.0 3.3 2 2 0 2 2 2 2 Sigma-54 interaction domain AAA_30 PF13604.6 gi|568163612|ref|YP_008946971.1| - 0.00018 21.3 0.3 0.78 9.4 0.1 3.1 3 1 1 4 4 2 2 AAA domain ResIII PF04851.15 gi|568163612|ref|YP_008946971.1| - 0.00022 21.3 0.1 1.6 8.7 0.0 3.2 2 2 1 3 3 3 1 Type III restriction enzyme, res subunit ATPase PF06745.13 gi|568163612|ref|YP_008946971.1| - 0.00027 20.4 0.3 0.93 8.8 0.2 3.1 2 1 0 2 2 2 2 KaiC AFG1_ATPase PF03969.16 gi|568163612|ref|YP_008946971.1| - 0.0003 19.8 0.0 0.56 9.0 0.0 2.4 2 0 0 2 2 2 2 AFG1-like ATPase DUF815 PF05673.13 gi|568163612|ref|YP_008946971.1| - 0.00049 19.3 0.0 0.67 9.1 0.0 2.6 2 0 0 2 2 2 2 Protein of unknown function (DUF815) ATPase_2 PF01637.18 gi|568163612|ref|YP_008946971.1| - 0.0011 18.9 2.6 0.077 12.9 0.0 3.5 3 2 0 3 3 2 1 ATPase domain predominantly from Archaea Zeta_toxin PF06414.12 gi|568163612|ref|YP_008946971.1| - 0.0017 17.7 0.1 0.27 10.5 0.0 2.8 2 0 0 2 2 2 1 Zeta toxin Bac_DnaA PF00308.18 gi|568163612|ref|YP_008946971.1| - 0.002 18.0 0.0 2.3 8.0 0.0 3.0 3 0 0 3 3 3 1 Bacterial dnaA protein Guanylate_kin PF00625.21 gi|568163612|ref|YP_008946971.1| - 0.0022 17.7 0.2 2.4 7.8 0.1 3.6 3 1 1 4 4 3 1 Guanylate kinase Sigma54_activ_2 PF14532.6 gi|568163612|ref|YP_008946971.1| - 0.0023 18.0 0.0 3.6 7.7 0.0 2.5 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_11 PF13086.6 gi|568163612|ref|YP_008946971.1| - 0.0027 17.5 0.0 3.4 7.4 0.0 2.7 2 0 0 2 2 2 0 AAA domain TniB PF05621.11 gi|568163612|ref|YP_008946971.1| - 0.0034 16.8 0.2 1.9 7.8 0.0 3.4 3 0 0 3 3 3 1 Bacterial TniB protein AAA_6 PF12774.7 gi|568163612|ref|YP_008946971.1| - 0.0038 16.3 0.0 0.81 8.6 0.0 2.6 2 0 0 2 2 2 1 Hydrolytic ATP binding site of dynein motor region NB-ARC PF00931.22 gi|568163612|ref|YP_008946971.1| - 0.0041 16.4 0.1 1.8 7.7 0.0 2.6 2 0 0 2 2 2 1 NB-ARC domain dNK PF01712.19 gi|568163612|ref|YP_008946971.1| - 0.0072 16.2 0.4 2.8 7.7 0.1 3.3 3 1 0 3 3 3 0 Deoxynucleoside kinase Glutaredoxin PF00462.24 gi|568163612|ref|YP_008946971.1| - 0.01 16.0 0.0 0.047 13.9 0.0 2.2 2 0 0 2 2 1 0 Glutaredoxin ATP-synt_ab PF00006.25 gi|568163612|ref|YP_008946971.1| - 0.011 15.4 0.0 1.6 8.4 0.0 2.3 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain SKI PF01202.22 gi|568163612|ref|YP_008946971.1| - 0.011 15.8 0.5 2 8.5 0.4 2.8 2 1 0 2 2 2 0 Shikimate kinase MFS_Mycoplasma PF07672.13 gi|568163612|ref|YP_008946971.1| - 0.014 14.7 0.8 0.022 14.0 0.8 1.2 1 0 0 1 1 1 0 Mycoplasma MFS transporter Cytidylate_kin PF02224.18 gi|568163612|ref|YP_008946971.1| - 0.016 14.9 0.0 1 9.0 0.0 2.8 2 0 0 2 2 2 0 Cytidylate kinase KTI12 PF08433.10 gi|568163612|ref|YP_008946971.1| - 0.017 14.6 0.1 3.3 7.1 0.0 3.6 4 0 0 4 4 4 0 Chromatin associated protein KTI12 MMR_HSR1 PF01926.23 gi|568163612|ref|YP_008946971.1| - 0.02 15.0 0.1 5.3 7.2 0.0 3.5 3 1 0 3 3 3 0 50S ribosome-binding GTPase NTPase_1 PF03266.15 gi|568163612|ref|YP_008946971.1| - 0.02 14.8 0.2 2.1 8.2 0.1 2.9 2 1 1 3 3 2 0 NTPase Parvo_NS1 PF01057.17 gi|568163612|ref|YP_008946971.1| - 0.024 13.7 0.0 4.7 6.2 0.0 2.4 2 0 0 2 2 2 0 Parvovirus non-structural protein NS1 Hydin_ADK PF17213.3 gi|568163612|ref|YP_008946971.1| - 0.024 14.9 0.1 1.3 9.3 0.1 2.9 3 0 0 3 3 2 0 Hydin Adenylate kinase-like domain AAA_19 PF13245.6 gi|568163612|ref|YP_008946971.1| - 0.029 14.7 1.6 6.6 7.1 0.0 3.0 2 1 0 2 2 2 0 AAA domain PduV-EutP PF10662.9 gi|568163612|ref|YP_008946971.1| - 0.033 13.9 0.1 1.8 8.3 0.0 2.4 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation SRPRB PF09439.10 gi|568163612|ref|YP_008946971.1| - 0.04 13.4 0.1 4.8 6.6 0.0 3.3 3 0 0 3 3 3 0 Signal recognition particle receptor beta subunit Adeno_IVa2 PF02456.15 gi|568163612|ref|YP_008946971.1| - 0.057 12.2 0.3 0.87 8.3 0.0 2.6 3 0 0 3 3 3 0 Adenovirus IVa2 protein Cytidylate_kin2 PF13189.6 gi|568163612|ref|YP_008946971.1| - 0.058 13.5 0.0 19 5.4 0.0 2.8 2 0 0 2 2 2 0 Cytidylate kinase-like family CPT PF07931.12 gi|568163612|ref|YP_008946971.1| - 0.062 13.1 0.0 4.4 7.1 0.1 2.4 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein AAA_29 PF13555.6 gi|568163612|ref|YP_008946971.1| - 0.078 12.7 0.0 20 5.0 0.0 2.6 3 0 0 3 3 2 0 P-loop containing region of AAA domain Zwilch PF09817.9 gi|568163612|ref|YP_008946971.1| - 0.085 11.3 0.3 0.16 10.4 0.3 1.3 1 0 0 1 1 1 0 RZZ complex, subunit zwilch DAP3 PF10236.9 gi|568163612|ref|YP_008946971.1| - 0.088 12.0 0.0 8.8 5.4 0.0 2.4 2 0 0 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 PPV_E1_C PF00519.17 gi|568163612|ref|YP_008946971.1| - 0.093 11.5 0.2 7.3 5.3 0.0 2.1 2 0 0 2 2 2 0 Papillomavirus helicase DUF3139 PF11337.8 gi|568163612|ref|YP_008946971.1| - 0.11 13.2 3.0 0.32 11.7 3.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3139) SRP54 PF00448.22 gi|568163612|ref|YP_008946971.1| - 0.39 10.3 2.2 37 3.9 0.0 3.6 3 1 0 3 3 3 0 SRP54-type protein, GTPase domain Inositol_P PF00459.25 gi|568163613|ref|YP_008946972.1| - 5.6e-21 75.3 0.0 7.4e-21 74.9 0.0 1.1 1 0 0 1 1 1 1 Inositol monophosphatase family FBPase PF00316.20 gi|568163613|ref|YP_008946972.1| - 1.8e-05 24.3 0.1 2.9e-05 23.6 0.1 1.3 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase, N-terminal domain Pyr_redox_2 PF07992.14 gi|568163614|ref|YP_008946973.1| - 2.6e-51 174.6 1.3 3.1e-51 174.4 1.3 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|568163614|ref|YP_008946973.1| - 1e-25 90.7 5.1 1.5e-25 90.1 0.8 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|568163614|ref|YP_008946973.1| - 7.1e-15 55.3 3.3 1.2e-14 54.6 0.5 2.5 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|568163614|ref|YP_008946973.1| - 3.9e-06 25.8 0.1 0.015 14.0 0.0 3.4 3 0 0 3 3 3 2 HI0933-like protein GIDA PF01134.22 gi|568163614|ref|YP_008946973.1| - 5.2e-05 22.5 10.2 0.046 12.8 1.0 4.4 2 2 3 5 5 5 2 Glucose inhibited division protein A K_oxygenase PF13434.6 gi|568163614|ref|YP_008946973.1| - 0.0002 20.6 0.1 0.56 9.3 0.0 3.2 2 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) FAD_binding_2 PF00890.24 gi|568163614|ref|YP_008946973.1| - 0.0004 19.6 2.4 0.7 8.9 0.0 3.1 2 1 1 3 3 3 2 FAD binding domain FAD_oxidored PF12831.7 gi|568163614|ref|YP_008946973.1| - 0.00081 18.9 2.1 0.038 13.4 0.0 2.7 3 1 1 4 4 4 1 FAD dependent oxidoreductase NAD_binding_7 PF13241.6 gi|568163614|ref|YP_008946973.1| - 0.003 18.0 0.6 0.029 14.8 0.1 2.4 2 1 0 2 2 2 1 Putative NAD(P)-binding Thi4 PF01946.17 gi|568163614|ref|YP_008946973.1| - 0.0063 15.8 0.0 0.96 8.6 0.0 2.5 2 0 0 2 2 2 1 Thi4 family NAD_binding_9 PF13454.6 gi|568163614|ref|YP_008946973.1| - 0.16 11.9 0.1 3 7.8 0.0 2.7 3 0 0 3 3 3 0 FAD-NAD(P)-binding DUF4346 PF14251.6 gi|568163615|ref|YP_008946974.1| - 1.8e-06 28.0 0.4 1.5e-05 25.0 0.1 2.3 1 1 1 2 2 2 1 Domain of unknown function (DUF4346) Baculo_p26 PF04766.12 gi|568163615|ref|YP_008946974.1| - 0.035 13.6 0.0 0.07 12.6 0.0 1.4 1 0 0 1 1 1 0 Nucleopolyhedrovirus p26 protein LIG3_BRCT PF16759.5 gi|568164796|ref|YP_008946975.1| - 0.15 12.4 0.0 0.24 11.7 0.0 1.3 1 0 0 1 1 1 0 DNA ligase 3 BRCT domain PTPS PF01242.19 gi|568163616|ref|YP_008946976.1| - 1.5e-21 76.7 0.0 1.9e-21 76.3 0.0 1.0 1 0 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase Ribosomal_S30AE PF02482.19 gi|568163617|ref|YP_008946977.1| - 0.037 14.8 0.1 0.074 13.8 0.1 1.6 1 0 0 1 1 1 0 Sigma 54 modulation protein / S30EA ribosomal protein CEP209_CC5 PF16574.5 gi|568163617|ref|YP_008946977.1| - 0.21 11.7 2.5 2.1 8.5 0.6 2.2 2 0 0 2 2 2 0 Coiled-coil region of centrosome protein CE290 FlgN PF05130.12 gi|568163617|ref|YP_008946977.1| - 0.22 12.1 1.7 0.68 10.4 1.7 1.8 1 1 0 1 1 1 0 FlgN protein HEPN PF05168.14 gi|568163618|ref|YP_008946979.1| - 0.031 14.4 1.4 0.065 13.4 1.4 1.5 1 1 0 1 1 1 0 HEPN domain MAF_flag10 PF01973.18 gi|568163620|ref|YP_008946981.1| - 1.7e-24 86.4 0.1 2.6e-24 85.8 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function DUF115 TPK_catalytic PF04263.16 gi|568163620|ref|YP_008946981.1| - 0.013 15.5 0.1 0.026 14.5 0.1 1.4 1 0 0 1 1 1 0 Thiamin pyrophosphokinase, catalytic domain HMGL-like PF00682.19 gi|568163621|ref|YP_008946982.1| - 1.4e-91 306.7 0.3 2.1e-91 306.1 0.3 1.2 1 0 0 1 1 1 1 HMGL-like EF-hand_14 PF17959.1 gi|568163621|ref|YP_008946982.1| - 0.15 12.4 0.0 0.33 11.3 0.0 1.5 1 0 0 1 1 1 0 EF-hand domain Lactamase_B_3 PF13483.6 gi|568163622|ref|YP_008946983.1| - 1.5e-33 116.0 0.1 1.9e-33 115.7 0.1 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|568163622|ref|YP_008946983.1| - 1.2e-12 47.8 1.5 1.2e-08 34.7 0.0 2.1 1 1 1 2 2 2 2 Beta-lactamase superfamily domain RHH_1 PF01402.21 gi|568163623|ref|YP_008946984.1| - 1.3e-10 40.9 0.5 1.7e-10 40.4 0.5 1.3 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family RHH_3 PF12651.7 gi|568163623|ref|YP_008946984.1| - 3.1e-07 30.3 1.1 4.5e-07 29.7 0.5 1.5 1 1 1 2 2 2 1 Ribbon-helix-helix domain RHH_5 PF07878.11 gi|568163624|ref|YP_008946985.1| - 5.3e-05 23.0 0.0 9.4e-05 22.2 0.0 1.4 1 0 0 1 1 1 1 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 CopG_antitoxin PF12441.8 gi|568163624|ref|YP_008946985.1| - 0.004 17.7 0.8 0.0091 16.5 0.0 1.9 2 0 0 2 2 2 1 CopG antitoxin of type II toxin-antitoxin system SAM_Exu PF18609.1 gi|568163624|ref|YP_008946985.1| - 0.24 11.5 2.5 0.46 10.6 2.5 1.5 1 0 0 1 1 1 0 Exuperantia SAM-like domain AsnC_trans_reg PF01037.21 gi|568163625|ref|YP_008946986.1| - 4e-10 39.5 0.2 4.6e-10 39.3 0.2 1.1 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain DUF3829 PF12889.7 gi|568163625|ref|YP_008946986.1| - 0.041 13.4 0.0 0.049 13.1 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3829) DapH_N PF08503.10 gi|568163625|ref|YP_008946986.1| - 0.044 14.0 0.1 0.055 13.7 0.1 1.1 1 0 0 1 1 1 0 Tetrahydrodipicolinate succinyltransferase N-terminal ABC2_membrane_3 PF12698.7 gi|568163626|ref|YP_008946987.1| - 8e-22 77.8 45.5 1.1e-21 77.4 45.5 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|568163626|ref|YP_008946987.1| - 1e-05 25.6 10.8 1e-05 25.6 10.8 3.4 2 1 1 3 3 3 2 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|568163626|ref|YP_008946987.1| - 4.1e-05 23.0 39.4 0.00022 20.6 39.4 2.3 1 1 0 1 1 1 1 ABC-2 family transporter protein DUF2754 PF10953.8 gi|568163626|ref|YP_008946987.1| - 0.78 10.0 7.8 9.7 6.5 0.0 3.5 3 0 0 3 3 3 0 Protein of unknown function (DUF2754) ABC_tran PF00005.27 gi|568163627|ref|YP_008946988.1| - 1.9e-26 93.2 0.0 2.7e-26 92.7 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|568163627|ref|YP_008946988.1| - 2e-12 47.6 1.3 8.7e-06 25.8 0.2 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_30 PF13604.6 gi|568163627|ref|YP_008946988.1| - 8.6e-05 22.3 0.0 0.00011 22.0 0.0 1.3 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 gi|568163627|ref|YP_008946988.1| - 0.00021 21.9 2.2 0.00033 21.2 2.2 1.8 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|568163627|ref|YP_008946988.1| - 0.00028 20.7 0.0 0.00037 20.3 0.0 1.3 1 1 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 gi|568163627|ref|YP_008946988.1| - 0.004 16.6 0.2 0.033 13.6 0.2 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|568163627|ref|YP_008946988.1| - 0.014 15.1 0.0 0.026 14.3 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_27 PF13514.6 gi|568163627|ref|YP_008946988.1| - 0.016 14.8 0.0 0.032 13.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.6 gi|568163627|ref|YP_008946988.1| - 0.024 15.0 0.0 0.031 14.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain Rad17 PF03215.15 gi|568163627|ref|YP_008946988.1| - 0.046 13.6 0.0 0.084 12.8 0.0 1.7 1 1 0 1 1 1 0 Rad17 P-loop domain SRP54 PF00448.22 gi|568163627|ref|YP_008946988.1| - 0.065 12.9 0.1 0.11 12.1 0.1 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain T2SSE PF00437.20 gi|568163627|ref|YP_008946988.1| - 0.074 12.1 0.1 0.11 11.5 0.1 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA PF00004.29 gi|568163627|ref|YP_008946988.1| - 0.08 13.4 0.0 0.14 12.5 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|568163627|ref|YP_008946988.1| - 0.084 13.2 0.1 0.16 12.2 0.1 1.7 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|568163627|ref|YP_008946988.1| - 0.21 12.0 0.0 0.3 11.5 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain Bromodomain PF00439.25 gi|568163628|ref|YP_008946989.1| - 0.0069 16.4 0.9 0.15 12.1 0.7 2.4 2 0 0 2 2 2 1 Bromodomain Syntaxin-5_N PF11416.8 gi|568163628|ref|YP_008946989.1| - 0.031 13.5 0.2 0.12 11.6 0.0 2.0 2 0 0 2 2 2 0 Syntaxin-5 N-terminal, Sly1p-binding domain MazG-like PF12643.7 gi|568163628|ref|YP_008946989.1| - 0.081 13.2 1.9 0.16 12.2 0.5 2.2 1 1 1 2 2 2 0 MazG-like family Pantoate_transf PF02548.15 gi|568163629|ref|YP_008946990.1| - 4.4e-106 354.0 0.1 5e-106 353.8 0.1 1.0 1 0 0 1 1 1 1 Ketopantoate hydroxymethyltransferase PEP_mutase PF13714.6 gi|568163629|ref|YP_008946990.1| - 2.3e-06 27.2 0.2 0.0011 18.4 0.0 2.6 1 1 2 3 3 3 2 Phosphoenolpyruvate phosphomutase PPS_PS PF02006.16 gi|568163630|ref|YP_008946991.1| - 8.6e-78 259.9 4.4 1.2e-77 259.5 4.4 1.2 1 0 0 1 1 1 1 Phosphopantothenate/pantothenate synthetase TPP_enzyme_M PF00205.22 gi|568163630|ref|YP_008946991.1| - 0.016 14.9 0.5 0.32 10.7 0.1 2.3 2 0 0 2 2 2 0 Thiamine pyrophosphate enzyme, central domain Arabinose_Isome PF02610.15 gi|568163630|ref|YP_008946991.1| - 0.035 13.3 0.5 0.08 12.1 0.1 1.7 2 0 0 2 2 2 0 L-arabinose isomerase GHMP_kinases_N PF00288.26 gi|568163631|ref|YP_008946992.1| - 0.00029 21.0 0.2 0.0005 20.3 0.2 1.4 1 0 0 1 1 1 1 GHMP kinases N terminal domain MoaE PF02391.17 gi|568163632|ref|YP_008946994.1| - 2e-18 66.7 0.1 3.1e-18 66.1 0.1 1.3 1 0 0 1 1 1 1 MoaE protein ThiS PF02597.20 gi|568163632|ref|YP_008946994.1| - 1e-12 48.5 0.3 1.1e-11 45.2 0.1 2.4 2 0 0 2 2 2 1 ThiS family Elongin_A PF06881.11 gi|568163632|ref|YP_008946994.1| - 0.026 15.0 0.1 7.2 7.2 0.2 2.4 2 0 0 2 2 2 0 RNA polymerase II transcription factor SIII (Elongin) subunit A CobT_C PF11775.8 gi|568163632|ref|YP_008946994.1| - 0.067 12.8 0.2 6.6 6.3 0.0 2.2 1 1 1 2 2 2 0 Cobalamin biosynthesis protein CobT VWA domain Phos_pyr_kin PF08543.12 gi|568163633|ref|YP_008946995.1| - 2.7e-68 230.0 0.0 3.4e-68 229.7 0.0 1.1 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase ThiP_synth PF10120.9 gi|568163633|ref|YP_008946995.1| - 2.8e-44 150.7 0.0 4.6e-44 149.9 0.0 1.4 1 0 0 1 1 1 1 Thiamine-phosphate synthase PfkB PF00294.24 gi|568163633|ref|YP_008946995.1| - 2.7e-06 26.9 0.0 3.4e-05 23.3 0.0 2.0 2 0 0 2 2 2 1 pfkB family carbohydrate kinase Carb_kinase PF01256.17 gi|568163633|ref|YP_008946995.1| - 0.024 14.1 0.0 0.045 13.2 0.0 1.3 1 0 0 1 1 1 0 Carbohydrate kinase HD_3 PF13023.6 gi|568163634|ref|YP_008946996.1| - 4e-14 52.9 0.0 1.5e-13 51.0 0.0 1.8 1 1 0 1 1 1 1 HD domain HD_2 PF12917.7 gi|568163634|ref|YP_008946996.1| - 8.8e-13 48.4 0.1 2.5e-12 46.9 0.1 1.7 1 1 0 1 1 1 1 HD containing hydrolase-like enzyme HD PF01966.22 gi|568163634|ref|YP_008946996.1| - 5.1e-06 26.7 0.0 1.5e-05 25.2 0.0 1.8 1 1 0 1 1 1 1 HD domain HDOD PF08668.12 gi|568163634|ref|YP_008946996.1| - 0.00024 20.6 0.0 0.00035 20.1 0.0 1.2 1 0 0 1 1 1 1 HDOD domain zf-ZPR1 PF03367.13 gi|568163634|ref|YP_008946996.1| - 0.036 13.9 0.0 0.049 13.5 0.0 1.2 1 0 0 1 1 1 0 ZPR1 zinc-finger domain Pyrophosphatase PF00719.19 gi|568163635|ref|YP_008946997.1| - 4.6e-58 195.5 0.2 5.2e-58 195.4 0.2 1.0 1 0 0 1 1 1 1 Inorganic pyrophosphatase Glyco_trans_2_3 PF13632.6 gi|568163636|ref|YP_008946998.1| - 1.3e-24 87.2 0.1 2.2e-24 86.5 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 gi|568163636|ref|YP_008946998.1| - 1.4e-21 77.4 0.0 2.3e-21 76.8 0.0 1.3 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_2 PF00535.26 gi|568163636|ref|YP_008946998.1| - 6.5e-20 71.6 0.0 8.9e-20 71.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.6 gi|568163636|ref|YP_008946998.1| - 4.8e-12 45.7 0.0 1.5e-10 40.9 0.0 2.2 2 0 0 2 2 2 1 Glycosyl transferase family 21 Glyco_tranf_2_2 PF10111.9 gi|568163636|ref|YP_008946998.1| - 8e-08 32.1 0.9 2.1e-07 30.7 0.9 1.6 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Cellulose_synt PF03552.14 gi|568163636|ref|YP_008946998.1| - 4.3e-05 22.2 1.6 6.6e-05 21.6 1.6 1.3 1 0 0 1 1 1 1 Cellulose synthase FIST_C PF10442.9 gi|568163636|ref|YP_008946998.1| - 0.076 13.0 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 FIST C domain Ribosomal_L6e PF01159.19 gi|568163636|ref|YP_008946998.1| - 0.091 13.3 0.1 1.7 9.2 0.0 2.5 2 0 0 2 2 2 0 Ribosomal protein L6e TGS PF02824.21 gi|568163637|ref|YP_008946999.1| - 4.3e-18 65.1 0.0 8.6e-18 64.2 0.0 1.5 1 0 0 1 1 1 1 TGS domain MMR_HSR1_Xtn PF16897.5 gi|568163637|ref|YP_008946999.1| - 1.4e-07 31.5 0.1 3.3e-07 30.3 0.1 1.7 1 1 0 1 1 1 1 C-terminal region of MMR_HSR1 domain YchF-GTPase_C PF06071.13 gi|568163637|ref|YP_008946999.1| - 0.011 15.9 0.1 1.9 8.7 0.0 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF933) Nucleoporin2 PF04096.14 gi|568163637|ref|YP_008946999.1| - 0.15 12.2 0.1 0.57 10.3 0.0 2.0 2 1 0 2 2 2 0 Nucleoporin autopeptidase RNase_HII PF01351.18 gi|568163638|ref|YP_008947000.1| - 9.3e-46 156.2 0.1 1.1e-45 156.0 0.1 1.0 1 0 0 1 1 1 1 Ribonuclease HII NMD3 PF04981.13 gi|568163639|ref|YP_008947001.1| - 4.3e-44 150.8 2.8 4.8e-44 150.6 2.8 1.0 1 0 0 1 1 1 1 NMD3 family NOB1_Zn_bind PF08772.11 gi|568163639|ref|YP_008947001.1| - 0.044 13.9 4.6 2.9 8.1 0.2 3.1 2 1 1 3 3 3 0 Nin one binding (NOB1) Zn-ribbon like Nudix_N_2 PF14803.6 gi|568163639|ref|YP_008947001.1| - 0.099 12.6 4.8 5 7.1 0.0 3.3 3 0 0 3 3 3 0 Nudix N-terminal DZR PF12773.7 gi|568163639|ref|YP_008947001.1| - 0.11 12.5 5.6 3.5 7.7 0.7 2.9 1 1 1 2 2 2 0 Double zinc ribbon PG_binding_3 PF09374.10 gi|568163639|ref|YP_008947001.1| - 0.17 12.2 0.0 0.32 11.3 0.0 1.4 1 0 0 1 1 1 0 Predicted Peptidoglycan domain zinc_ribbon_2 PF13240.6 gi|568163639|ref|YP_008947001.1| - 0.26 11.1 8.6 0.28 10.9 0.9 3.1 3 0 0 3 3 3 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|568163639|ref|YP_008947001.1| - 0.45 10.0 6.2 3.8 7.1 0.4 3.2 3 0 0 3 3 3 0 zinc-ribbon domain Rpr2 PF04032.16 gi|568163639|ref|YP_008947001.1| - 1.1 9.5 0.1 1.1 9.5 0.1 2.8 2 1 0 3 3 3 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain DUF424 PF04242.13 gi|568163640|ref|YP_008947002.1| - 2.2e-24 85.6 1.0 2.5e-24 85.3 1.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF424) eIF-5_eIF-2B PF01873.17 gi|568163641|ref|YP_008947003.1| - 4e-31 107.3 0.3 4.9e-31 107.0 0.3 1.1 1 0 0 1 1 1 1 Domain found in IF2B/IF5 RNA_POL_M_15KD PF02150.16 gi|568163641|ref|YP_008947003.1| - 0.014 15.3 0.1 0.47 10.4 0.0 2.3 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit SUI1 PF01253.22 gi|568163641|ref|YP_008947003.1| - 0.016 15.7 0.0 0.029 14.9 0.0 1.5 1 0 0 1 1 1 0 Translation initiation factor SUI1 zinc_ribbon_6 PF14599.6 gi|568163641|ref|YP_008947003.1| - 0.026 14.5 0.4 0.35 10.9 0.0 2.2 2 0 0 2 2 2 0 Zinc-ribbon Rubredoxin_2 PF18073.1 gi|568163641|ref|YP_008947003.1| - 0.05 13.3 0.2 2.5 7.9 0.0 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain Ribosomal_S27e PF01667.17 gi|568163641|ref|YP_008947003.1| - 0.092 12.5 0.6 0.17 11.6 0.6 1.4 1 0 0 1 1 1 0 Ribosomal protein S27 Radical_SAM PF04055.21 gi|568163642|ref|YP_008947004.1| - 2.1e-25 90.0 0.2 1.2e-24 87.6 0.1 2.0 2 0 0 2 2 2 1 Radical SAM superfamily UPF0004 PF00919.20 gi|568163642|ref|YP_008947004.1| - 4.5e-24 84.4 0.2 8e-24 83.5 0.2 1.4 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 TRAM PF01938.20 gi|568163642|ref|YP_008947004.1| - 5.8e-06 26.2 0.1 1.4e-05 25.0 0.1 1.6 1 0 0 1 1 1 1 TRAM domain TRAM_2 PF18693.1 gi|568163642|ref|YP_008947004.1| - 0.018 15.2 0.0 0.12 12.6 0.0 2.4 2 0 0 2 2 2 0 TRAM domain CDC37_C PF08564.10 gi|568163642|ref|YP_008947004.1| - 0.21 11.7 3.0 0.99 9.6 0.3 2.8 3 0 0 3 3 3 0 Cdc37 C terminal domain Thiolase_N PF00108.23 gi|568163643|ref|YP_008947005.1| - 4.4e-84 281.9 0.3 5.3e-84 281.6 0.3 1.1 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|568163643|ref|YP_008947005.1| - 1.2e-36 125.0 0.0 2.6e-36 123.9 0.0 1.6 1 0 0 1 1 1 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|568163643|ref|YP_008947005.1| - 2.2e-05 24.1 1.7 4.8e-05 23.1 1.6 1.5 1 1 0 1 1 1 1 Beta-ketoacyl synthase, N-terminal domain eIF-1a PF01176.19 gi|568163644|ref|YP_008947006.1| - 3.8e-23 81.1 0.3 5.2e-23 80.6 0.3 1.2 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 RIO1 PF01163.22 gi|568163645|ref|YP_008947007.1| - 1.2e-61 207.6 0.4 1.6e-61 207.2 0.4 1.2 1 0 0 1 1 1 1 RIO1 family APH PF01636.23 gi|568163645|ref|YP_008947007.1| - 0.0079 16.1 0.0 0.019 14.9 0.0 1.5 1 1 1 2 2 2 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 gi|568163645|ref|YP_008947007.1| - 0.029 13.2 0.2 0.035 12.9 0.2 1.2 1 0 0 1 1 1 0 Fungal protein kinase Kdo PF06293.14 gi|568163645|ref|YP_008947007.1| - 0.049 13.0 0.0 0.4 10.0 0.0 2.2 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family KH_1 PF00013.29 gi|568163646|ref|YP_008947008.1| - 0.00016 21.5 6.6 0.00055 19.7 1.6 2.4 2 0 0 2 2 2 2 KH domain DUF3883 PF13020.6 gi|568163647|ref|YP_008947009.1| - 0.0037 17.3 0.1 0.01 15.9 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF3883) DUF1152 PF06626.12 gi|568163648|ref|YP_008947010.1| - 1.2e-114 382.5 0.0 1.4e-114 382.3 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1152) HHH_8 PF14716.6 gi|568163648|ref|YP_008947010.1| - 0.11 12.9 0.2 0.28 11.6 0.2 1.7 1 0 0 1 1 1 0 Helix-hairpin-helix domain Cys_Met_Meta_PP PF01053.20 gi|568163651|ref|YP_008947013.1| - 3.4e-121 404.4 0.1 4.1e-121 404.1 0.1 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 gi|568163651|ref|YP_008947013.1| - 2.2e-10 40.2 0.1 2e-09 37.1 0.1 2.1 1 1 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|568163651|ref|YP_008947013.1| - 2.9e-08 33.1 0.3 1.6e-07 30.7 0.3 2.0 1 1 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|568163651|ref|YP_008947013.1| - 0.0021 17.4 0.0 0.022 14.0 0.0 2.1 1 1 0 1 1 1 1 Beta-eliminating lyase Met_gamma_lyase PF06838.11 gi|568163651|ref|YP_008947013.1| - 0.021 13.4 0.2 0.85 8.1 0.2 2.1 1 1 0 1 1 1 0 Methionine gamma-lyase SelA PF03841.13 gi|568163651|ref|YP_008947013.1| - 0.041 12.9 0.1 0.59 9.1 0.2 2.6 2 1 0 2 2 2 0 L-seryl-tRNA selenium transferase GHMP_kinases_N PF00288.26 gi|568163652|ref|YP_008947014.1| - 2.8e-13 49.9 3.4 7.1e-13 48.6 3.4 1.7 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|568163652|ref|YP_008947014.1| - 1.3e-07 31.9 0.1 4e-07 30.3 0.0 1.9 2 0 0 2 2 2 1 GHMP kinases C terminal MoeA_N PF03453.17 gi|568163653|ref|YP_008947015.1| - 5.4e-36 123.7 0.0 1.3e-35 122.4 0.0 1.7 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 gi|568163653|ref|YP_008947015.1| - 4.5e-26 91.2 0.1 7.7e-26 90.5 0.1 1.3 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.15 gi|568163653|ref|YP_008947015.1| - 1.6e-13 50.6 0.0 5e-13 49.0 0.0 1.9 1 0 0 1 1 1 1 MoeA C-terminal region (domain IV) Peptidase_S24 PF00717.23 gi|568163653|ref|YP_008947015.1| - 5.1 7.1 6.3 1.8 8.6 0.3 3.1 4 0 0 4 4 4 0 Peptidase S24-like PqqD PF05402.12 gi|568163654|ref|YP_008947016.1| - 5.2e-13 49.1 0.1 6.2e-13 48.8 0.1 1.2 1 0 0 1 1 1 1 Coenzyme PQQ synthesis protein D (PqqD) DUF4777 PF16007.5 gi|568163654|ref|YP_008947016.1| - 0.04 14.2 0.1 0.11 12.7 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4777) tRNA_anti-codon PF01336.25 gi|568163655|ref|YP_008947017.1| - 1.4e-06 28.2 0.2 2.1e-06 27.6 0.2 1.2 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain REPA_OB_2 PF16900.5 gi|568163655|ref|YP_008947017.1| - 0.0081 16.1 0.5 0.01 15.8 0.5 1.2 1 0 0 1 1 1 1 Replication protein A OB domain AAA_5 PF07728.14 gi|568163656|ref|YP_008947018.1| - 2.4e-27 95.6 0.1 8.8e-27 93.8 0.0 2.0 2 1 1 3 3 3 1 AAA domain (dynein-related subfamily) AAA_lid_8 PF17868.1 gi|568163656|ref|YP_008947018.1| - 6.4e-07 29.2 0.4 2.2e-06 27.4 0.1 2.1 2 0 0 2 2 2 1 AAA lid domain AAA PF00004.29 gi|568163656|ref|YP_008947018.1| - 1.3e-05 25.6 0.2 0.00034 21.0 0.0 2.7 3 1 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|568163656|ref|YP_008947018.1| - 2.8e-05 24.6 0.7 7.3e-05 23.2 0.1 2.0 2 2 0 2 2 2 1 AAA ATPase domain Mg_chelatase PF01078.21 gi|568163656|ref|YP_008947018.1| - 3.7e-05 23.2 0.1 0.00036 20.0 0.0 2.2 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 gi|568163656|ref|YP_008947018.1| - 0.00014 21.7 0.0 0.00023 21.0 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) MCM PF00493.23 gi|568163656|ref|YP_008947018.1| - 0.0024 17.0 0.0 0.0083 15.3 0.0 1.8 2 0 0 2 2 2 1 MCM P-loop domain Sigma54_activat PF00158.26 gi|568163656|ref|YP_008947018.1| - 0.0048 16.6 0.0 0.017 14.9 0.0 1.9 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_22 PF13401.6 gi|568163656|ref|YP_008947018.1| - 0.0058 16.9 0.3 0.057 13.7 0.0 2.7 2 2 0 2 2 2 1 AAA domain PMC2NT PF08066.12 gi|568163656|ref|YP_008947018.1| - 0.0085 16.8 0.2 0.03 15.0 0.2 2.0 1 0 0 1 1 1 1 PMC2NT (NUC016) domain AAA_7 PF12775.7 gi|568163656|ref|YP_008947018.1| - 0.036 13.6 0.0 0.063 12.8 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region EF-hand_14 PF17959.1 gi|568163656|ref|YP_008947018.1| - 0.039 14.3 0.2 8.3 6.8 0.0 2.6 2 0 0 2 2 2 0 EF-hand domain IstB_IS21 PF01695.17 gi|568163656|ref|YP_008947018.1| - 0.059 13.1 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein RuvB_N PF05496.12 gi|568163656|ref|YP_008947018.1| - 0.095 12.4 0.1 0.62 9.8 0.1 2.2 1 1 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain VWA PF00092.28 gi|568163657|ref|YP_008947019.1| - 6.1e-09 36.4 0.1 2e-07 31.4 0.0 2.6 2 1 0 2 2 2 1 von Willebrand factor type A domain VWA_3 PF13768.6 gi|568163657|ref|YP_008947019.1| - 8.3e-07 29.1 0.0 2e-06 27.8 0.0 1.6 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 gi|568163657|ref|YP_008947019.1| - 1.4e-05 25.7 0.0 0.00048 20.7 0.0 2.7 2 1 0 2 2 2 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 gi|568163657|ref|YP_008947019.1| - 1.4e-05 24.6 0.0 3e-05 23.5 0.0 1.5 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein UvrA_DNA-bind PF17755.1 gi|568163657|ref|YP_008947019.1| - 0.00011 22.5 0.3 0.00065 20.0 0.1 2.2 1 1 1 2 2 2 1 UvrA DNA-binding domain SDH_alpha PF03313.15 gi|568163657|ref|YP_008947019.1| - 0.088 12.5 0.8 0.13 11.9 0.8 1.3 1 0 0 1 1 1 0 Serine dehydratase alpha chain DUF29 PF01724.16 gi|568163657|ref|YP_008947019.1| - 1.2 9.4 4.0 2.5 8.3 3.1 2.0 2 0 0 2 2 2 0 Domain of unknown function DUF29 DUF5095 PF17016.5 gi|568163657|ref|YP_008947019.1| - 2.5 7.7 9.3 3.6 7.2 0.2 3.4 2 1 1 3 3 3 0 Domain of unknown function (DUF5095) CCG PF02754.16 gi|568163659|ref|YP_008947021.1| - 7.1e-33 112.7 0.3 1.4e-15 57.3 0.1 2.2 2 0 0 2 2 2 2 Cysteine-rich domain Fer2_3 PF13085.6 gi|568163660|ref|YP_008947022.1| - 3.1e-32 110.8 0.1 5.4e-32 110.0 0.1 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_8 PF13183.6 gi|568163660|ref|YP_008947022.1| - 3.4e-11 43.4 2.2 3.4e-11 43.4 2.2 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|568163660|ref|YP_008947022.1| - 3e-08 34.1 4.2 3e-08 34.1 4.2 2.5 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|568163660|ref|YP_008947022.1| - 1.8e-06 28.0 12.0 2.2e-05 24.5 9.5 3.0 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|568163660|ref|YP_008947022.1| - 2.4e-05 24.4 19.7 5.8e-05 23.1 10.3 2.6 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|568163660|ref|YP_008947022.1| - 7e-05 22.7 16.3 0.0011 18.9 1.1 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|568163660|ref|YP_008947022.1| - 0.0001 22.5 2.6 0.13 12.4 0.2 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|568163660|ref|YP_008947022.1| - 0.00053 20.5 18.0 0.0022 18.5 10.1 2.7 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4 PF00037.27 gi|568163660|ref|YP_008947022.1| - 0.001 18.8 20.6 0.0065 16.2 3.0 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|568163660|ref|YP_008947022.1| - 0.0011 19.9 8.7 0.0011 19.9 8.7 3.0 2 1 2 4 4 4 3 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|568163660|ref|YP_008947022.1| - 0.002 18.2 11.8 0.058 13.5 0.5 3.0 3 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|568163660|ref|YP_008947022.1| - 0.0039 17.9 3.7 1.4 9.7 0.6 2.7 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|568163660|ref|YP_008947022.1| - 0.0041 17.6 7.2 0.2 12.3 1.9 2.9 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_20 PF14691.6 gi|568163660|ref|YP_008947022.1| - 0.027 14.2 5.9 0.46 10.3 0.3 2.8 3 0 0 3 3 3 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_6 PF12837.7 gi|568163660|ref|YP_008947022.1| - 0.048 13.7 0.8 0.048 13.7 0.8 2.9 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|568163660|ref|YP_008947022.1| - 0.082 13.8 3.7 1.5 9.7 0.0 2.9 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer2 PF00111.27 gi|568163660|ref|YP_008947022.1| - 0.11 12.5 0.5 0.11 12.5 0.5 2.3 2 1 1 3 3 3 0 2Fe-2S iron-sulfur cluster binding domain Fer4_4 PF12800.7 gi|568163660|ref|YP_008947022.1| - 0.13 12.8 1.0 0.13 12.8 1.0 3.1 3 0 0 3 3 2 0 4Fe-4S binding domain FAD_binding_2 PF00890.24 gi|568163661|ref|YP_008947023.1| - 9.4e-110 367.5 0.3 1.1e-109 367.3 0.3 1.1 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.20 gi|568163661|ref|YP_008947023.1| - 1.3e-43 148.0 0.2 2e-43 147.4 0.2 1.3 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term DAO PF01266.24 gi|568163661|ref|YP_008947023.1| - 1.9e-05 24.5 1.3 0.00019 21.1 1.3 2.2 1 1 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|568163661|ref|YP_008947023.1| - 6.9e-05 22.2 0.1 0.00012 21.5 0.1 1.3 1 0 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.6 gi|568163661|ref|YP_008947023.1| - 0.00027 21.1 1.0 0.0011 19.2 1.0 2.1 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 gi|568163661|ref|YP_008947023.1| - 0.00042 19.1 1.8 0.00071 18.4 0.9 1.8 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox_2 PF07992.14 gi|568163661|ref|YP_008947023.1| - 0.0028 16.9 2.2 0.0047 16.2 0.4 2.2 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|568163661|ref|YP_008947023.1| - 0.0093 15.1 2.6 0.025 13.7 2.4 1.8 2 0 0 2 2 2 1 Glucose inhibited division protein A Thi4 PF01946.17 gi|568163661|ref|YP_008947023.1| - 0.015 14.6 1.0 0.065 12.5 0.2 2.3 3 0 0 3 3 3 0 Thi4 family Lycopene_cycl PF05834.12 gi|568163661|ref|YP_008947023.1| - 0.032 13.3 0.1 0.06 12.4 0.1 1.4 1 0 0 1 1 1 0 Lycopene cyclase protein TMP-TENI PF02581.17 gi|568163661|ref|YP_008947023.1| - 0.078 12.3 0.1 0.14 11.5 0.1 1.4 1 0 0 1 1 1 0 Thiamine monophosphate synthase Pyr_redox_3 PF13738.6 gi|568163661|ref|YP_008947023.1| - 0.1 11.9 1.3 0.12 11.6 0.2 1.7 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Hydrolase_6 PF13344.6 gi|568163662|ref|YP_008947024.1| - 6.3e-23 80.8 0.0 1.3e-22 79.8 0.0 1.5 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|568163662|ref|YP_008947024.1| - 2.1e-18 66.2 0.0 5e-18 64.9 0.0 1.7 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase PF00702.26 gi|568163662|ref|YP_008947024.1| - 2.8e-05 24.5 0.0 0.00012 22.5 0.0 2.2 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|568163662|ref|YP_008947024.1| - 7.8e-05 22.8 0.4 0.0003 20.9 0.0 2.1 1 1 1 2 2 2 1 Haloacid dehalogenase-like hydrolase UPF0180 PF03698.13 gi|568163662|ref|YP_008947024.1| - 0.11 12.7 0.3 1.8 8.8 0.0 2.6 2 1 1 3 3 3 0 Uncharacterised protein family (UPF0180) DUF2070 PF09843.9 gi|568164800|ref|YP_008947026.1| - 2.8e-102 342.8 2.3 3.2e-102 342.7 2.3 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2070) DAO PF01266.24 gi|568163663|ref|YP_008947027.1| - 3e-12 46.8 0.0 4e-07 29.9 0.0 2.1 2 0 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|568163663|ref|YP_008947027.1| - 5.2e-11 42.3 0.0 3.3e-06 26.5 0.1 2.2 1 1 1 2 2 2 2 FAD binding domain GIDA PF01134.22 gi|568163663|ref|YP_008947027.1| - 3.2e-07 29.8 0.0 6.6e-07 28.7 0.0 1.5 1 0 0 1 1 1 1 Glucose inhibited division protein A FAD_binding_3 PF01494.19 gi|568163663|ref|YP_008947027.1| - 4.1e-07 29.6 0.1 6.5e-06 25.6 0.1 2.5 1 1 0 1 1 1 1 FAD binding domain FAD_oxidored PF12831.7 gi|568163663|ref|YP_008947027.1| - 5.5e-07 29.3 0.0 2.6e-06 27.1 0.0 1.9 1 1 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|568163663|ref|YP_008947027.1| - 8.3e-07 29.1 0.1 3.8e-06 27.0 0.0 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|568163663|ref|YP_008947027.1| - 1.1e-06 28.1 0.0 2e-06 27.3 0.0 1.5 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|568163663|ref|YP_008947027.1| - 0.00012 21.4 0.0 0.001 18.3 0.0 2.1 2 0 0 2 2 2 1 Thi4 family Trp_halogenase PF04820.14 gi|568163663|ref|YP_008947027.1| - 0.00021 20.3 0.0 0.02 13.7 0.0 2.4 2 1 0 2 2 2 2 Tryptophan halogenase Pyr_redox PF00070.27 gi|568163663|ref|YP_008947027.1| - 0.00055 20.4 0.0 0.0024 18.4 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|568163663|ref|YP_008947027.1| - 0.0026 16.5 0.0 0.0044 15.8 0.0 1.3 1 0 0 1 1 1 1 HI0933-like protein Lycopene_cycl PF05834.12 gi|568163663|ref|YP_008947027.1| - 0.0035 16.4 0.0 0.0064 15.6 0.0 1.4 1 0 0 1 1 1 1 Lycopene cyclase protein Pyr_redox_3 PF13738.6 gi|568163663|ref|YP_008947027.1| - 0.12 11.6 0.0 0.94 8.7 0.0 2.0 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|568163663|ref|YP_008947027.1| - 0.15 11.3 0.0 0.28 10.4 0.0 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Poty_coat PF00767.18 gi|568163664|ref|YP_008947028.1| - 0.11 12.0 0.1 0.36 10.3 0.0 1.8 2 0 0 2 2 2 0 Potyvirus coat protein Metallophos_2 PF12850.7 gi|568163666|ref|YP_008947030.1| - 5.3e-06 26.7 0.0 6.3e-06 26.5 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain CCB1 PF12046.8 gi|568163666|ref|YP_008947030.1| - 0.0042 16.4 0.0 0.0067 15.8 0.0 1.3 1 0 0 1 1 1 1 Cofactor assembly of complex C subunit B Bax1-I PF01027.20 gi|568163667|ref|YP_008947031.1| - 0.13 12.1 23.2 0.17 11.7 23.2 1.1 1 0 0 1 1 1 0 Inhibitor of apoptosis-promoting Bax1 DUF1275 PF06912.11 gi|568163667|ref|YP_008947031.1| - 2.2 8.1 14.4 3.3e+02 1.1 14.4 2.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1275) Pyr_redox_2 PF07992.14 gi|568163668|ref|YP_008947032.1| - 2.5e-05 23.7 0.0 6e-05 22.4 0.0 1.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|568163668|ref|YP_008947032.1| - 3.2e-05 24.1 0.1 8.4e-05 22.7 0.1 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|568163668|ref|YP_008947032.1| - 0.00013 21.7 0.0 0.045 13.3 0.1 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 gi|568163668|ref|YP_008947032.1| - 0.0063 15.8 0.4 0.68 9.1 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|568163668|ref|YP_008947032.1| - 0.014 14.7 0.0 0.022 14.0 0.0 1.3 1 0 0 1 1 1 0 FAD binding domain HI0933_like PF03486.14 gi|568163668|ref|YP_008947032.1| - 0.052 12.3 0.0 0.1 11.3 0.0 1.5 1 0 0 1 1 1 0 HI0933-like protein GIDA PF01134.22 gi|568163668|ref|YP_008947032.1| - 0.063 12.4 0.0 0.14 11.2 0.0 1.5 1 1 0 1 1 1 0 Glucose inhibited division protein A Lycopene_cycl PF05834.12 gi|568163668|ref|YP_008947032.1| - 0.13 11.3 0.1 0.36 9.8 0.1 1.9 2 1 0 2 2 2 0 Lycopene cyclase protein Pyr_redox PF00070.27 gi|568163668|ref|YP_008947032.1| - 0.14 12.7 0.2 0.68 10.5 0.0 2.2 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase HTH_AsnC-type PF13404.6 gi|568163669|ref|YP_008947033.1| - 2.5e-18 65.6 0.3 4.8e-18 64.7 0.3 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|568163669|ref|YP_008947033.1| - 1.8e-17 62.7 0.6 3.5e-17 61.7 0.6 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding AsnC_trans_reg PF01037.21 gi|568163669|ref|YP_008947033.1| - 1.1e-15 57.3 0.1 1.6e-15 56.8 0.1 1.2 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_11 PF08279.12 gi|568163669|ref|YP_008947033.1| - 1.4e-06 28.1 0.3 3.6e-06 26.8 0.0 1.8 2 0 0 2 2 1 1 HTH domain HTH_5 PF01022.20 gi|568163669|ref|YP_008947033.1| - 6.1e-05 22.8 0.1 0.00014 21.6 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR PF01047.22 gi|568163669|ref|YP_008947033.1| - 0.00037 20.3 0.3 0.0018 18.2 0.2 2.1 2 1 1 3 3 2 1 MarR family Sigma70_r4 PF04545.16 gi|568163669|ref|YP_008947033.1| - 0.00038 19.9 0.6 0.0041 16.6 0.1 2.7 2 1 1 3 3 3 1 Sigma-70, region 4 HTH_Mga PF08280.11 gi|568163669|ref|YP_008947033.1| - 0.00046 20.2 0.0 0.00091 19.2 0.0 1.5 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain MarR_2 PF12802.7 gi|568163669|ref|YP_008947033.1| - 0.0014 18.5 0.0 0.0039 17.1 0.0 1.7 2 0 0 2 2 2 1 MarR family HTH_20 PF12840.7 gi|568163669|ref|YP_008947033.1| - 0.0015 18.6 0.0 0.0035 17.4 0.0 1.6 2 0 0 2 2 1 1 Helix-turn-helix domain NapD PF03927.13 gi|568163669|ref|YP_008947033.1| - 0.0017 18.4 0.0 0.003 17.6 0.0 1.4 1 0 0 1 1 1 1 NapD protein HTH_23 PF13384.6 gi|568163669|ref|YP_008947033.1| - 0.0026 17.5 0.0 0.0096 15.7 0.0 1.9 2 0 0 2 2 2 1 Homeodomain-like domain HTH_27 PF13463.6 gi|568163669|ref|YP_008947033.1| - 0.0028 18.1 0.0 0.0061 17.0 0.0 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_40 PF14493.6 gi|568163669|ref|YP_008947033.1| - 0.0031 17.9 0.7 0.022 15.2 0.3 2.2 1 1 1 2 2 2 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|568163669|ref|YP_008947033.1| - 0.0036 17.2 0.2 0.033 14.2 0.0 2.4 2 1 1 3 3 3 1 Crp-like helix-turn-helix domain AsnC_trans_reg2 PF17805.1 gi|568163669|ref|YP_008947033.1| - 0.0055 16.8 0.0 0.014 15.6 0.0 1.7 2 1 0 2 2 1 1 AsnC-like ligand binding domain HTH_IclR PF09339.10 gi|568163669|ref|YP_008947033.1| - 0.0082 15.9 0.0 0.014 15.2 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain TrmB PF01978.19 gi|568163669|ref|YP_008947033.1| - 0.0088 15.9 0.0 0.018 14.9 0.0 1.6 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB GerE PF00196.19 gi|568163669|ref|YP_008947033.1| - 0.011 15.3 0.7 0.032 13.8 0.1 2.0 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family HTH_Tnp_ISL3 PF13542.6 gi|568163669|ref|YP_008947033.1| - 0.013 14.9 0.0 0.023 14.1 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 Sigma70_r4_2 PF08281.12 gi|568163669|ref|YP_008947033.1| - 0.015 15.0 0.2 0.056 13.1 0.1 2.0 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_10 PF04967.12 gi|568163669|ref|YP_008947033.1| - 0.016 15.0 0.1 0.11 12.3 0.0 2.3 2 1 0 2 2 2 0 HTH DNA binding domain HTH_34 PF13601.6 gi|568163669|ref|YP_008947033.1| - 0.019 15.1 0.0 0.035 14.3 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain ACT_4 PF13291.6 gi|568163669|ref|YP_008947033.1| - 0.021 15.4 0.0 0.3 11.7 0.0 2.5 3 0 0 3 3 2 0 ACT domain Fe_dep_repress PF01325.19 gi|568163669|ref|YP_008947033.1| - 0.027 14.7 0.1 0.076 13.2 0.0 1.8 2 0 0 2 2 1 0 Iron dependent repressor, N-terminal DNA binding domain LexA_DNA_bind PF01726.16 gi|568163669|ref|YP_008947033.1| - 0.034 13.9 0.0 0.074 12.8 0.0 1.6 1 0 0 1 1 1 0 LexA DNA binding domain NTPase_1 PF03266.15 gi|568163669|ref|YP_008947033.1| - 0.038 13.9 0.3 0.096 12.6 0.3 1.9 1 1 0 1 1 1 0 NTPase DUF4423 PF14394.6 gi|568163669|ref|YP_008947033.1| - 0.039 13.7 1.4 3.5 7.3 0.1 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4423) RuvB_C PF05491.13 gi|568163669|ref|YP_008947033.1| - 0.04 13.8 0.1 0.1 12.5 0.1 1.7 1 0 0 1 1 1 0 RuvB C-terminal winged helix domain Mga PF05043.13 gi|568163669|ref|YP_008947033.1| - 0.045 14.3 0.0 0.089 13.4 0.0 1.5 1 0 0 1 1 1 0 Mga helix-turn-helix domain HTH_29 PF13551.6 gi|568163669|ref|YP_008947033.1| - 0.047 13.7 0.0 0.083 12.9 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix Rrf2 PF02082.20 gi|568163669|ref|YP_008947033.1| - 0.053 13.9 0.2 0.44 10.9 0.0 2.3 3 0 0 3 3 2 0 Transcriptional regulator HTH_38 PF13936.6 gi|568163669|ref|YP_008947033.1| - 0.086 12.6 0.1 0.21 11.4 0.1 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain Penicillinase_R PF03965.16 gi|568163669|ref|YP_008947033.1| - 0.1 13.0 0.0 0.22 11.9 0.0 1.5 1 0 0 1 1 1 0 Penicillinase repressor HTH_1 PF00126.27 gi|568163669|ref|YP_008947033.1| - 0.13 12.2 0.0 0.26 11.3 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family RimK PF08443.11 gi|568163670|ref|YP_008947034.1| - 9.2e-31 106.9 0.0 1.1e-30 106.7 0.0 1.0 1 0 0 1 1 1 1 RimK-like ATP-grasp domain GSH-S_ATP PF02955.16 gi|568163670|ref|YP_008947034.1| - 2.6e-11 43.2 0.1 9.4e-11 41.4 0.2 1.6 1 1 1 2 2 2 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATP-grasp_3 PF02655.14 gi|568163670|ref|YP_008947034.1| - 3.8e-08 33.5 0.1 5.5e-08 33.0 0.1 1.2 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_YheCD PF14398.6 gi|568163670|ref|YP_008947034.1| - 3.8e-07 29.6 0.0 0.0036 16.6 0.0 2.3 2 0 0 2 2 2 2 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 gi|568163670|ref|YP_008947034.1| - 2.7e-05 23.6 0.0 0.09 12.0 0.0 2.3 2 0 0 2 2 2 2 Sugar-transfer associated ATP-grasp Synapsin_C PF02750.14 gi|568163670|ref|YP_008947034.1| - 0.00092 18.8 0.0 0.001 18.7 0.0 1.1 1 0 0 1 1 1 1 Synapsin, ATP binding domain Ins134_P3_kin PF05770.11 gi|568163670|ref|YP_008947034.1| - 0.0021 17.6 0.0 0.37 10.3 0.0 2.1 1 1 1 2 2 2 2 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain polyprenyl_synt PF00348.17 gi|568163671|ref|YP_008947035.1| - 6.3e-34 117.2 0.3 9.5e-34 116.6 0.3 1.2 1 0 0 1 1 1 1 Polyprenyl synthetase DUF4335 PF14233.6 gi|568163671|ref|YP_008947035.1| - 0.081 12.8 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4335) ARA70 PF12489.8 gi|568164801|ref|YP_008947036.1| - 0.36 11.0 3.0 4.4 7.5 0.7 2.3 1 1 0 2 2 2 0 Nuclear coactivator PNP_UDP_1 PF01048.20 gi|568163672|ref|YP_008947037.1| - 3.8e-46 157.2 0.0 4.4e-46 157.0 0.0 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily Pribosyltran PF00156.27 gi|568163673|ref|YP_008947038.1| - 9.1e-17 61.0 0.0 1.3e-16 60.5 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|568163673|ref|YP_008947038.1| - 0.00078 18.9 0.0 0.0011 18.5 0.0 1.1 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase KH_5 PF13184.6 gi|568163673|ref|YP_008947038.1| - 0.1 12.7 1.0 3.9 7.6 0.0 2.9 3 0 0 3 3 3 0 NusA-like KH domain eRF1_2 PF03464.15 gi|568163674|ref|YP_008947039.1| - 4.5e-44 150.0 0.0 7.3e-44 149.3 0.0 1.3 1 0 0 1 1 1 1 eRF1 domain 2 eRF1_3 PF03465.15 gi|568163674|ref|YP_008947039.1| - 6.5e-21 74.9 3.5 3.1e-20 72.7 1.1 2.7 2 2 0 2 2 2 1 eRF1 domain 3 acVLRF1 PF18859.1 gi|568163674|ref|YP_008947039.1| - 1.8e-13 50.9 0.0 3.6e-13 49.9 0.0 1.5 1 0 0 1 1 1 1 Actinobacteria/chloroflexi VLRF1 release factor baeRF_family10 PF18854.1 gi|568163674|ref|YP_008947039.1| - 2.1e-12 47.5 0.0 3e-12 47.0 0.0 1.2 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 10 PAGK PF15284.6 gi|568164802|ref|YP_008947040.1| - 0.089 12.7 0.4 0.097 12.6 0.4 1.3 1 1 0 1 1 1 0 Phage-encoded virulence factor FRB_dom PF08771.11 gi|568164805|ref|YP_008947043.1| - 0.053 13.9 0.8 0.058 13.8 0.8 1.1 1 0 0 1 1 1 0 FKBP12-rapamycin binding domain CreD PF06123.12 gi|568164806|ref|YP_008947044.1| - 0.017 13.9 0.0 0.022 13.6 0.0 1.1 1 0 0 1 1 1 0 Inner membrane protein CreD Gal-bind_lectin PF00337.22 gi|568164807|ref|YP_008947045.1| - 0.1 12.1 0.1 0.22 11.0 0.1 1.5 1 0 0 1 1 1 0 Galactoside-binding lectin DUF4190 PF13828.6 gi|568164808|ref|YP_008947046.1| - 0.022 14.5 5.7 0.022 14.5 5.7 3.7 4 0 0 4 4 4 0 Domain of unknown function (DUF4190) DUF1077 PF06417.12 gi|568164808|ref|YP_008947046.1| - 4.9 7.2 6.4 0.64 10.0 1.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1077) PadR PF03551.14 gi|568163675|ref|YP_008947048.1| - 4.6e-11 42.5 0.1 1.3e-10 41.1 0.0 1.8 2 0 0 2 2 2 1 Transcriptional regulator PadR-like family DUF2120 PF09893.9 gi|568163675|ref|YP_008947048.1| - 0.00058 20.0 1.5 0.00079 19.5 1.5 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2120) RTP PF02334.16 gi|568163675|ref|YP_008947048.1| - 0.0022 18.6 0.0 0.01 16.5 0.0 1.9 1 1 1 2 2 2 1 Replication terminator protein HTH_45 PF14947.6 gi|568163675|ref|YP_008947048.1| - 0.0066 16.4 1.2 0.021 14.8 0.0 2.2 3 0 0 3 3 3 1 Winged helix-turn-helix BLACT_WH PF17778.1 gi|568163675|ref|YP_008947048.1| - 0.0094 15.9 0.0 0.049 13.6 0.0 2.0 2 0 0 2 2 2 1 Beta-lactamase associated winged helix domain DUF4364 PF14277.6 gi|568163675|ref|YP_008947048.1| - 0.036 13.8 1.0 0.037 13.8 0.2 1.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4364) TrmB PF01978.19 gi|568163675|ref|YP_008947048.1| - 0.13 12.2 0.0 0.92 9.4 0.0 2.2 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB ABC_tran PF00005.27 gi|568163676|ref|YP_008947049.1| - 2.9e-30 105.6 0.0 4.7e-30 104.9 0.0 1.3 1 0 0 1 1 1 1 ABC transporter DUF4162 PF13732.6 gi|568163676|ref|YP_008947049.1| - 4.8e-13 49.6 0.3 1.1e-12 48.5 0.3 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_21 PF13304.6 gi|568163676|ref|YP_008947049.1| - 4.4e-11 43.1 0.3 1.1e-07 32.0 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|568163676|ref|YP_008947049.1| - 0.00025 20.9 0.0 0.39 10.4 0.0 2.3 2 0 0 2 2 2 2 AAA ATPase domain AAA_23 PF13476.6 gi|568163676|ref|YP_008947049.1| - 0.00067 20.2 0.1 0.0017 18.9 0.1 1.6 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|568163676|ref|YP_008947049.1| - 0.0013 18.5 0.1 0.0024 17.6 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 gi|568163676|ref|YP_008947049.1| - 0.0022 17.5 0.1 0.03 13.8 0.1 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_27 PF13514.6 gi|568163676|ref|YP_008947049.1| - 0.0062 16.2 0.1 0.015 14.9 0.0 1.6 2 0 0 2 2 2 1 AAA domain Rad17 PF03215.15 gi|568163676|ref|YP_008947049.1| - 0.024 14.5 0.0 0.052 13.5 0.0 1.5 2 0 0 2 2 2 0 Rad17 P-loop domain AAA PF00004.29 gi|568163676|ref|YP_008947049.1| - 0.052 14.0 0.3 0.69 10.3 0.3 2.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) ABC2_membrane PF01061.24 gi|568163677|ref|YP_008947050.1| - 1.7e-34 119.1 22.8 1.7e-34 119.1 22.8 2.1 2 1 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|568163677|ref|YP_008947050.1| - 4.7e-18 65.4 26.6 4.7e-18 65.4 26.6 1.8 1 1 0 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|568163677|ref|YP_008947050.1| - 3e-08 33.3 18.4 4e-08 32.9 18.4 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|568163677|ref|YP_008947050.1| - 0.00059 19.8 13.8 0.00059 19.8 13.8 2.6 2 1 0 2 2 2 1 ABC-2 family transporter protein EMP70 PF02990.16 gi|568163677|ref|YP_008947050.1| - 0.0017 17.1 0.2 0.0017 17.1 0.2 2.1 1 1 1 2 2 2 1 Endomembrane protein 70 Ald_Xan_dh_C2 PF02738.18 gi|568163678|ref|YP_008947051.1| - 4.2e-141 471.1 0.0 5.4e-141 470.7 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 gi|568163678|ref|YP_008947051.1| - 1.5e-17 64.0 0.0 2.1e-15 57.0 0.0 2.6 1 1 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DUF1947 PF09183.10 gi|568163679|ref|YP_008947052.1| - 1.3e-24 86.2 1.0 2.1e-24 85.6 1.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1947) PUA PF01472.20 gi|568163679|ref|YP_008947052.1| - 1.4e-14 53.8 0.2 2.3e-14 53.1 0.2 1.3 1 0 0 1 1 1 1 PUA domain UPF0113 PF03657.13 gi|568163679|ref|YP_008947052.1| - 0.0032 17.7 0.2 0.0047 17.2 0.2 1.3 1 0 0 1 1 1 1 UPF0113 PUA domain Pre-PUA PF17832.1 gi|568163679|ref|YP_008947052.1| - 0.037 14.7 2.9 0.46 11.2 1.8 2.4 2 1 0 2 2 2 0 Pre-PUA-like domain Glycos_transf_2 PF00535.26 gi|568163680|ref|YP_008947053.1| - 3.2e-23 82.4 0.0 5.2e-23 81.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|568163680|ref|YP_008947053.1| - 0.0011 18.9 0.0 0.0012 18.7 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|568163680|ref|YP_008947053.1| - 0.0042 16.6 0.1 0.0062 16.1 0.1 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|568163680|ref|YP_008947053.1| - 0.18 12.3 0.0 0.31 11.6 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 2 HTH_24 PF13412.6 gi|568163681|ref|YP_008947054.1| - 5.7e-06 25.8 0.2 1.1e-05 24.9 0.2 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 gi|568163681|ref|YP_008947054.1| - 0.00011 22.1 0.4 0.00035 20.4 0.1 2.0 2 1 1 3 3 3 1 HTH domain Prefoldin_2 PF01920.20 gi|568163681|ref|YP_008947054.1| - 0.0017 18.3 3.3 0.0029 17.5 3.3 1.3 1 0 0 1 1 1 1 Prefoldin subunit HTH_IclR PF09339.10 gi|568163681|ref|YP_008947054.1| - 0.0021 17.8 0.0 0.0033 17.2 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR PF01047.22 gi|568163681|ref|YP_008947054.1| - 0.0022 17.9 0.1 0.013 15.4 0.0 1.9 2 0 0 2 2 2 1 MarR family Med9 PF07544.13 gi|568163681|ref|YP_008947054.1| - 0.0027 17.7 1.0 0.0099 16.0 1.0 1.9 1 1 0 1 1 1 1 RNA polymerase II transcription mediator complex subunit 9 Csm1_N PF18504.1 gi|568163681|ref|YP_008947054.1| - 0.0038 17.5 2.1 0.009 16.3 2.1 1.7 1 1 0 1 1 1 1 Csm1 N-terminal domain NRBF2 PF08961.10 gi|568163681|ref|YP_008947054.1| - 0.013 15.2 1.3 0.02 14.5 1.3 1.3 1 1 0 1 1 1 0 Nuclear receptor-binding factor 2, autophagy regulator DivIC PF04977.15 gi|568163681|ref|YP_008947054.1| - 0.017 14.9 2.1 0.025 14.4 0.4 1.9 1 1 1 2 2 2 0 Septum formation initiator HTH_DeoR PF08220.12 gi|568163681|ref|YP_008947054.1| - 0.019 14.7 0.0 0.035 13.9 0.0 1.4 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain LexA_DNA_bind PF01726.16 gi|568163681|ref|YP_008947054.1| - 0.021 14.6 0.0 0.048 13.4 0.0 1.6 1 1 0 1 1 1 0 LexA DNA binding domain TPR_MLP1_2 PF07926.12 gi|568163681|ref|YP_008947054.1| - 0.021 14.9 1.4 0.059 13.4 1.0 1.7 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein MarR_2 PF12802.7 gi|568163681|ref|YP_008947054.1| - 0.034 14.0 0.0 0.046 13.6 0.0 1.3 1 0 0 1 1 1 0 MarR family Phage_terminase PF10668.9 gi|568163681|ref|YP_008947054.1| - 0.041 13.9 0.0 0.071 13.1 0.0 1.4 1 0 0 1 1 1 0 Phage terminase small subunit FeoC PF09012.10 gi|568163681|ref|YP_008947054.1| - 0.047 13.8 0.0 0.09 12.9 0.0 1.5 1 1 0 1 1 1 0 FeoC like transcriptional regulator Myc-LZ PF02344.15 gi|568163681|ref|YP_008947054.1| - 0.056 13.5 0.0 0.14 12.3 0.0 1.7 1 0 0 1 1 1 0 Myc leucine zipper domain Bap31_Bap29_C PF18035.1 gi|568163681|ref|YP_008947054.1| - 0.057 13.4 1.3 0.16 12.0 1.3 1.8 1 1 0 1 1 1 0 Bap31/Bap29 cytoplasmic coiled-coil domain HTH_5 PF01022.20 gi|568163681|ref|YP_008947054.1| - 0.061 13.2 0.0 0.13 12.1 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_36 PF13730.6 gi|568163681|ref|YP_008947054.1| - 0.061 13.3 0.6 0.088 12.8 0.1 1.6 2 0 0 2 2 1 0 Helix-turn-helix domain Fe_dep_repress PF01325.19 gi|568163681|ref|YP_008947054.1| - 0.072 13.3 0.0 0.12 12.6 0.0 1.3 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain DUF5595 PF18077.1 gi|568163681|ref|YP_008947054.1| - 0.073 13.2 1.8 0.13 12.3 1.8 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF5595) SlyX PF04102.12 gi|568163681|ref|YP_008947054.1| - 0.074 13.7 0.0 0.16 12.6 0.0 1.5 1 0 0 1 1 1 0 SlyX Rrf2 PF02082.20 gi|568163681|ref|YP_008947054.1| - 0.095 13.1 0.0 0.17 12.2 0.0 1.5 1 1 0 1 1 1 0 Transcriptional regulator Syntaxin-6_N PF09177.11 gi|568163681|ref|YP_008947054.1| - 0.097 13.2 0.8 0.15 12.7 0.7 1.4 1 1 0 1 1 1 0 Syntaxin 6, N-terminal FAM76 PF16046.5 gi|568163681|ref|YP_008947054.1| - 0.12 11.7 0.6 0.12 11.7 0.6 1.0 1 0 0 1 1 1 0 FAM76 protein Cep57_CLD_2 PF14197.6 gi|568163681|ref|YP_008947054.1| - 0.36 11.0 3.4 0.99 9.5 3.4 1.8 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 OCD_Mu_crystall PF02423.15 gi|568163682|ref|YP_008947055.1| - 3.8e-47 160.8 0.1 4.9e-46 157.1 0.1 1.9 1 1 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family Shikimate_DH PF01488.20 gi|568163682|ref|YP_008947055.1| - 2.1e-05 24.6 0.0 4.5e-05 23.5 0.0 1.5 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase IlvN PF07991.12 gi|568163682|ref|YP_008947055.1| - 0.0063 16.1 0.0 0.013 15.1 0.0 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_binding_2 PF03446.15 gi|568163682|ref|YP_008947055.1| - 0.0073 16.5 0.0 0.012 15.8 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase GFO_IDH_MocA PF01408.22 gi|568163682|ref|YP_008947055.1| - 0.022 15.6 0.0 0.072 13.9 0.0 1.8 1 1 1 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold NmrA PF05368.13 gi|568163682|ref|YP_008947055.1| - 0.025 14.1 0.0 0.04 13.5 0.0 1.3 1 0 0 1 1 1 0 NmrA-like family F420_oxidored PF03807.17 gi|568163682|ref|YP_008947055.1| - 0.064 13.8 0.2 0.28 11.8 0.1 2.0 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent Aminotran_1_2 PF00155.21 gi|568163683|ref|YP_008947056.1| - 5.4e-28 98.2 0.0 6.2e-28 98.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_MocR PF12897.7 gi|568163683|ref|YP_008947056.1| - 3.7e-10 39.2 0.0 6.2e-10 38.4 0.0 1.3 1 1 0 1 1 1 1 Alanine-glyoxylate amino-transferase Penicillinase_R PF03965.16 gi|568163683|ref|YP_008947056.1| - 0.13 12.6 0.1 0.43 10.9 0.1 1.8 1 1 1 2 2 2 0 Penicillinase repressor Peptidase_M24 PF00557.24 gi|568163684|ref|YP_008947057.1| - 6.1e-59 199.2 0.1 9.6e-59 198.6 0.1 1.3 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 gi|568163684|ref|YP_008947057.1| - 1.7e-16 61.0 0.0 3.4e-16 60.1 0.0 1.5 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain Hist_deacetyl PF00850.19 gi|568163685|ref|YP_008947058.1| - 2.1e-58 198.2 0.0 3.1e-58 197.7 0.0 1.2 1 0 0 1 1 1 1 Histone deacetylase domain PmbA_TldD PF01523.16 gi|568163686|ref|YP_008947059.1| - 8.4e-42 143.9 0.3 1.1e-41 143.6 0.3 1.1 1 0 0 1 1 1 1 Putative modulator of DNA gyrase PmbA_TldD PF01523.16 gi|568163687|ref|YP_008947060.1| - 1.3e-32 113.7 2.1 1.9e-32 113.3 2.1 1.2 1 0 0 1 1 1 1 Putative modulator of DNA gyrase Sm_multidrug_ex PF06695.11 gi|568164810|ref|YP_008947061.1| - 1.8e-17 64.1 5.7 2.2e-17 63.8 5.7 1.1 1 0 0 1 1 1 1 Putative small multi-drug export protein Ald_Xan_dh_C2 PF02738.18 gi|568163688|ref|YP_008947062.1| - 1.6e-107 360.3 0.0 4.5e-88 296.1 0.0 2.0 1 1 1 2 2 2 2 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 gi|568163688|ref|YP_008947062.1| - 8.2e-11 42.2 0.0 2.3e-10 40.8 0.0 1.8 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain XdhC_C PF13478.6 gi|568163689|ref|YP_008947064.1| - 3.1e-23 82.6 0.1 4.4e-23 82.1 0.1 1.2 1 0 0 1 1 1 1 XdhC Rossmann domain Pyr_redox PF00070.27 gi|568163689|ref|YP_008947064.1| - 0.00052 20.5 0.3 1.7 9.3 0.0 2.4 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase 2-Hacid_dh_C PF02826.19 gi|568163689|ref|YP_008947064.1| - 0.17 11.2 0.0 0.24 10.7 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SapB_1 PF05184.15 gi|568164812|ref|YP_008947065.1| - 0.017 15.1 1.6 0.017 15.1 1.6 2.2 2 0 0 2 2 2 0 Saposin-like type B, region 1 PALP PF00291.25 gi|568163690|ref|YP_008947066.1| - 6.3e-58 196.5 0.0 7.2e-58 196.3 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme HypA PF01155.19 gi|568163690|ref|YP_008947066.1| - 0.013 15.5 2.2 0.2 11.7 0.8 2.4 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn-ribbon_8 PF09723.10 gi|568163690|ref|YP_008947066.1| - 0.26 11.4 5.0 0.92 9.7 4.6 2.0 1 1 1 2 2 2 0 Zinc ribbon domain zf-ribbon_3 PF13248.6 gi|568163690|ref|YP_008947066.1| - 0.79 9.2 4.2 2.4 7.7 4.2 1.9 1 1 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_4 PF13717.6 gi|568163690|ref|YP_008947066.1| - 0.97 9.4 7.0 4.1 7.4 0.7 2.6 1 1 1 2 2 2 0 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|568163690|ref|YP_008947066.1| - 4 7.3 6.3 12 5.8 6.3 1.8 1 1 0 1 1 1 0 zinc-ribbon domain DNA_RNApol_7kD PF03604.13 gi|568163690|ref|YP_008947066.1| - 5.9 6.7 7.1 13 5.5 7.1 1.6 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit Trypsin_2 PF13365.6 gi|568163691|ref|YP_008947067.1| - 5.5e-25 89.0 1.1 7.9e-25 88.5 1.1 1.2 1 0 0 1 1 1 1 Trypsin-like peptidase domain PDZ_2 PF13180.6 gi|568163691|ref|YP_008947067.1| - 6e-14 52.1 0.1 1.3e-13 51.1 0.1 1.5 1 0 0 1 1 1 1 PDZ domain PDZ_6 PF17820.1 gi|568163691|ref|YP_008947067.1| - 1.5e-10 40.7 0.1 2.9e-10 39.8 0.1 1.5 1 0 0 1 1 1 1 PDZ domain Trypsin PF00089.26 gi|568163691|ref|YP_008947067.1| - 1.2e-09 38.3 0.1 2.6e-09 37.2 0.1 1.5 1 1 0 1 1 1 1 Trypsin PDZ PF00595.24 gi|568163691|ref|YP_008947067.1| - 1.8e-06 28.2 0.2 4.5e-06 26.9 0.2 1.7 1 0 0 1 1 1 1 PDZ domain Tricorn_PDZ PF14685.6 gi|568163691|ref|YP_008947067.1| - 0.00032 20.6 0.0 0.00071 19.5 0.0 1.6 1 0 0 1 1 1 1 Tricorn protease PDZ domain GRASP55_65 PF04495.14 gi|568163691|ref|YP_008947067.1| - 0.002 18.5 0.0 0.004 17.5 0.0 1.5 1 0 0 1 1 1 1 GRASP55/65 PDZ-like domain Peptidase_S46 PF10459.9 gi|568163691|ref|YP_008947067.1| - 0.031 12.9 0.5 0.058 12.0 0.5 1.3 1 0 0 1 1 1 0 Peptidase S46 Peptidase_S7 PF00949.21 gi|568163691|ref|YP_008947067.1| - 0.046 13.5 2.4 0.19 11.6 0.3 2.3 2 0 0 2 2 2 0 Peptidase S7, Flavivirus NS3 serine protease Peptidase_S29 PF02907.15 gi|568163691|ref|YP_008947067.1| - 0.1 12.3 0.1 0.29 10.9 0.1 1.7 2 0 0 2 2 2 0 Hepatitis C virus NS3 protease PAP2 PF01569.21 gi|568163692|ref|YP_008947068.1| - 1.2e-22 80.2 3.4 1.2e-22 80.2 3.4 1.7 2 0 0 2 2 2 1 PAP2 superfamily PAP2_3 PF14378.6 gi|568163692|ref|YP_008947068.1| - 6.5e-10 39.0 13.4 1e-09 38.4 9.7 2.3 1 1 0 1 1 1 1 PAP2 superfamily PAP2_C PF14360.6 gi|568163692|ref|YP_008947068.1| - 0.018 15.6 2.5 0.018 15.6 2.5 2.8 3 1 0 3 3 3 0 PAP2 superfamily C-terminal DUF4064 PF13273.6 gi|568164813|ref|YP_008947069.1| - 0.15 12.3 10.3 3.6 7.9 10.3 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF4064) DUF2542 PF10808.8 gi|568164813|ref|YP_008947069.1| - 0.42 11.1 3.3 1.3 9.5 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2542) ABC_tran PF00005.27 gi|568163693|ref|YP_008947070.1| - 9.9e-26 90.9 0.0 2.4e-25 89.6 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|568163693|ref|YP_008947070.1| - 3.9e-10 40.0 0.0 1.7e-05 24.8 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|568163693|ref|YP_008947070.1| - 0.0034 18.1 0.1 0.008 16.9 0.1 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) GDP_Man_Dehyd PF16363.5 gi|568163693|ref|YP_008947070.1| - 0.14 11.5 0.0 0.37 10.1 0.0 1.6 2 0 0 2 2 2 0 GDP-mannose 4,6 dehydratase Aminotran_3 PF00202.21 gi|568163694|ref|YP_008947071.1| - 1.5e-102 343.3 0.0 1.8e-102 343.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 gi|568163694|ref|YP_008947071.1| - 0.027 13.7 0.0 2.9 7.0 0.0 2.1 2 0 0 2 2 2 0 Aminotransferase class I and II Methyltransf_11 PF08241.12 gi|568163696|ref|YP_008947073.1| - 9.6e-18 64.6 0.2 1.4e-17 64.2 0.2 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|568163696|ref|YP_008947073.1| - 1.1e-13 51.7 0.2 1.9e-13 50.9 0.2 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|568163696|ref|YP_008947073.1| - 3.8e-11 43.0 0.3 5.2e-11 42.6 0.3 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|568163696|ref|YP_008947073.1| - 4.5e-10 39.6 0.0 5.1e-10 39.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|568163696|ref|YP_008947073.1| - 2.4e-09 37.9 0.1 3.3e-09 37.4 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|568163696|ref|YP_008947073.1| - 2.2e-07 30.6 0.0 2.5e-07 30.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain Ubie_methyltran PF01209.18 gi|568163696|ref|YP_008947073.1| - 3.9e-06 26.4 0.2 4.6e-06 26.1 0.2 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family PrmA PF06325.13 gi|568163696|ref|YP_008947073.1| - 1.7e-05 24.4 0.2 2.3e-05 24.0 0.2 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_8 PF05148.15 gi|568163696|ref|YP_008947073.1| - 0.00044 20.2 1.3 0.00069 19.5 1.3 1.2 1 0 0 1 1 1 1 Hypothetical methyltransferase NodS PF05401.11 gi|568163696|ref|YP_008947073.1| - 0.00096 18.8 0.3 0.0012 18.5 0.3 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) Plk4_PB1 PF18190.1 gi|568163696|ref|YP_008947073.1| - 0.012 15.8 0.4 0.024 14.8 0.4 1.6 1 1 0 1 1 1 0 Polo-like Kinase 4 Polo Box 1 Methyltransf_18 PF12847.7 gi|568163696|ref|YP_008947073.1| - 0.012 15.6 0.2 0.018 15.0 0.2 1.4 1 0 0 1 1 1 0 Methyltransferase domain MetW PF07021.12 gi|568163696|ref|YP_008947073.1| - 0.012 15.2 0.6 0.018 14.6 0.6 1.2 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW Methyltransf_2 PF00891.18 gi|568163696|ref|YP_008947073.1| - 0.02 14.2 0.2 0.027 13.8 0.2 1.1 1 0 0 1 1 1 0 O-methyltransferase domain DUF4743 PF15916.5 gi|568163696|ref|YP_008947073.1| - 0.021 14.8 0.0 0.03 14.3 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4743) TPMT PF05724.11 gi|568163696|ref|YP_008947073.1| - 0.069 12.8 0.1 0.77 9.4 0.1 2.0 1 1 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) Ad_Cy_reg PF16701.5 gi|568163696|ref|YP_008947073.1| - 0.18 11.5 0.4 0.28 10.9 0.2 1.4 2 0 0 2 2 2 0 Adenylate cyclase regulatory domain Polyketide_cyc PF03364.20 gi|568163697|ref|YP_008947074.1| - 0.068 13.4 0.0 0.098 12.9 0.0 1.4 1 1 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport HIT PF01230.23 gi|568163698|ref|YP_008947075.1| - 1.3e-22 80.3 0.0 1.7e-22 80.0 0.0 1.1 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 gi|568163698|ref|YP_008947075.1| - 3.3e-14 53.3 0.1 9.3e-14 51.9 0.0 1.6 2 0 0 2 2 2 1 Scavenger mRNA decapping enzyme C-term binding CwfJ_C_1 PF04677.15 gi|568163698|ref|YP_008947075.1| - 0.0028 17.5 0.0 0.0049 16.7 0.0 1.4 1 0 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 FemAB PF02388.16 gi|568163698|ref|YP_008947075.1| - 0.013 14.3 0.0 0.018 14.0 0.0 1.1 1 0 0 1 1 1 0 FemAB family TniB PF05621.11 gi|568163698|ref|YP_008947075.1| - 0.041 13.3 0.1 0.056 12.9 0.1 1.1 1 0 0 1 1 1 0 Bacterial TniB protein Acyl-CoA_dh_1 PF00441.24 gi|568163699|ref|YP_008947076.1| - 3.7e-35 121.3 0.2 5.8e-35 120.7 0.2 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|568163699|ref|YP_008947076.1| - 9.7e-28 97.1 0.0 2.5e-27 95.8 0.0 1.7 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|568163699|ref|YP_008947076.1| - 7.8e-21 74.1 0.1 1.5e-20 73.2 0.1 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|568163699|ref|YP_008947076.1| - 1.5e-16 60.9 0.0 2.6e-16 60.1 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain CBM39 PF15886.5 gi|568163699|ref|YP_008947076.1| - 0.015 15.2 0.0 0.03 14.2 0.0 1.5 1 0 0 1 1 1 0 Carbohydrate binding domain (family 32) ABC_tran PF00005.27 gi|568163700|ref|YP_008947077.1| - 2.1e-30 106.0 0.0 1.7e-29 103.1 0.0 2.2 2 0 0 2 2 2 1 ABC transporter oligo_HPY PF08352.12 gi|568163700|ref|YP_008947077.1| - 8.8e-18 64.6 0.0 1.6e-17 63.8 0.0 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|568163700|ref|YP_008947077.1| - 3.5e-08 33.6 0.7 0.00034 20.5 0.0 2.3 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|568163700|ref|YP_008947077.1| - 1.5e-06 27.9 0.1 1.2e-05 24.9 0.1 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|568163700|ref|YP_008947077.1| - 2.9e-06 27.6 0.0 0.0049 17.1 0.0 2.3 2 0 0 2 2 2 2 AAA domain TniB PF05621.11 gi|568163700|ref|YP_008947077.1| - 1.1e-05 24.9 0.3 0.00081 18.8 0.1 2.4 2 1 0 2 2 2 1 Bacterial TniB protein AAA_33 PF13671.6 gi|568163700|ref|YP_008947077.1| - 0.00051 20.2 0.0 0.0021 18.2 0.0 1.9 1 1 1 2 2 2 1 AAA domain AAA_25 PF13481.6 gi|568163700|ref|YP_008947077.1| - 0.00093 18.8 0.0 0.86 9.1 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_15 PF13175.6 gi|568163700|ref|YP_008947077.1| - 0.0023 17.7 3.0 0.0028 17.4 0.1 2.2 2 1 0 3 3 3 1 AAA ATPase domain AAA_13 PF13166.6 gi|568163700|ref|YP_008947077.1| - 0.0052 15.5 0.1 0.55 8.8 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.6 gi|568163700|ref|YP_008947077.1| - 0.0053 17.3 0.1 0.018 15.6 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|568163700|ref|YP_008947077.1| - 0.0085 15.8 0.0 0.017 14.9 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|568163700|ref|YP_008947077.1| - 0.01 16.2 0.2 0.025 14.9 0.2 1.7 1 1 0 1 1 1 0 AAA ATPase domain NB-ARC PF00931.22 gi|568163700|ref|YP_008947077.1| - 0.013 14.7 0.4 0.11 11.7 0.2 2.2 2 0 0 2 2 2 0 NB-ARC domain IstB_IS21 PF01695.17 gi|568163700|ref|YP_008947077.1| - 0.023 14.5 0.1 0.15 11.7 0.0 2.0 2 0 0 2 2 2 0 IstB-like ATP binding protein RsgA_GTPase PF03193.16 gi|568163700|ref|YP_008947077.1| - 0.024 14.5 0.0 0.048 13.6 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase SbcCD_C PF13558.6 gi|568163700|ref|YP_008947077.1| - 0.043 14.0 0.0 0.18 12.0 0.0 2.0 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit NACHT PF05729.12 gi|568163700|ref|YP_008947077.1| - 0.052 13.5 0.3 0.33 10.9 0.1 2.1 2 0 0 2 2 2 0 NACHT domain AAA_24 PF13479.6 gi|568163700|ref|YP_008947077.1| - 0.058 13.1 0.2 0.18 11.5 0.1 1.8 1 1 0 1 1 1 0 AAA domain TsaE PF02367.17 gi|568163700|ref|YP_008947077.1| - 0.059 13.4 0.0 0.12 12.4 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE cobW PF02492.19 gi|568163700|ref|YP_008947077.1| - 0.082 12.5 0.0 0.17 11.5 0.0 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_30 PF13604.6 gi|568163700|ref|YP_008947077.1| - 0.14 11.8 0.1 1.2 8.8 0.0 2.1 2 0 0 2 2 2 0 AAA domain DEAD PF00270.29 gi|568163700|ref|YP_008947077.1| - 0.26 11.0 1.0 21 4.8 0.0 2.9 2 1 1 3 3 3 0 DEAD/DEAH box helicase AAA PF00004.29 gi|568163700|ref|YP_008947077.1| - 0.48 10.8 2.3 3.6 8.0 0.2 2.7 2 1 1 3 3 2 0 ATPase family associated with various cellular activities (AAA) ABC_tran PF00005.27 gi|568163701|ref|YP_008947078.1| - 1.3e-24 87.3 0.0 3.8e-23 82.5 0.0 2.4 1 1 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|568163701|ref|YP_008947078.1| - 1.5e-19 70.2 0.0 2.8e-19 69.4 0.0 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|568163701|ref|YP_008947078.1| - 6.6e-09 36.0 1.5 1.8e-07 31.3 1.5 2.3 1 1 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|568163701|ref|YP_008947078.1| - 2.7e-06 27.0 0.0 5.5e-05 22.7 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|568163701|ref|YP_008947078.1| - 0.00068 19.3 0.0 0.0013 18.4 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.6 gi|568163701|ref|YP_008947078.1| - 0.0022 17.6 0.3 0.39 10.2 0.2 2.8 3 0 0 3 3 3 1 AAA domain AAA_22 PF13401.6 gi|568163701|ref|YP_008947078.1| - 0.0071 16.6 0.2 1.3 9.3 0.0 2.8 3 0 0 3 3 3 1 AAA domain IstB_IS21 PF01695.17 gi|568163701|ref|YP_008947078.1| - 0.027 14.2 0.1 1.8 8.2 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein PRK PF00485.18 gi|568163701|ref|YP_008947078.1| - 0.028 14.2 0.0 0.042 13.6 0.0 1.4 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family OSCP PF00213.18 gi|568163701|ref|YP_008947078.1| - 0.032 14.4 0.3 0.099 12.8 0.2 1.9 1 1 0 1 1 1 0 ATP synthase delta (OSCP) subunit ATPase PF06745.13 gi|568163701|ref|YP_008947078.1| - 0.039 13.3 0.7 3.1 7.1 0.1 2.5 2 0 0 2 2 2 0 KaiC Mg_chelatase PF01078.21 gi|568163701|ref|YP_008947078.1| - 0.054 12.9 0.0 0.5 9.7 0.0 2.1 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 gi|568163701|ref|YP_008947078.1| - 0.097 12.4 0.1 0.33 10.7 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 gi|568163701|ref|YP_008947078.1| - 0.11 12.8 0.3 0.27 11.6 0.3 1.7 1 1 0 1 1 1 0 AAA ATPase domain AAA_18 PF13238.6 gi|568163701|ref|YP_008947078.1| - 0.14 12.7 0.2 0.8 10.3 0.1 2.3 2 1 0 2 2 2 0 AAA domain ABC_ATPase PF09818.9 gi|568163701|ref|YP_008947078.1| - 0.22 10.3 1.7 0.72 8.6 0.1 2.4 2 1 0 2 2 2 0 Predicted ATPase of the ABC class CbiA PF01656.23 gi|568163701|ref|YP_008947078.1| - 0.6 10.2 2.0 2.1 8.4 2.0 2.2 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain BPD_transp_1 PF00528.22 gi|568163702|ref|YP_008947079.1| - 1.1e-29 103.6 13.7 1.1e-29 103.6 13.7 2.0 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|568163702|ref|YP_008947079.1| - 1.7e-06 27.9 0.2 1.7e-06 27.9 0.2 3.3 4 0 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C LRR_12 PF18837.1 gi|568163702|ref|YP_008947079.1| - 0.34 10.6 2.6 0.89 9.3 0.9 2.6 3 0 0 3 3 3 0 Leucine-rich repeat BPD_transp_1 PF00528.22 gi|568163703|ref|YP_008947080.1| - 7.7e-41 139.9 17.0 7.7e-41 139.9 17.0 2.8 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_5 PF00496.22 gi|568163704|ref|YP_008947081.1| - 1.3e-53 182.3 8.4 1.3e-53 182.3 8.4 2.2 2 0 0 2 2 2 1 Bacterial extracellular solute-binding proteins, family 5 Middle PKD PF00801.20 gi|568163704|ref|YP_008947081.1| - 1.3e-10 41.0 5.1 8.8e-06 25.5 0.3 3.3 2 0 0 2 2 2 2 PKD domain U-box PF04564.15 gi|568163704|ref|YP_008947081.1| - 0.081 13.1 0.0 1.4 9.1 0.0 2.3 2 0 0 2 2 2 0 U-box domain DUF515 PF04415.12 gi|568163704|ref|YP_008947081.1| - 1.1 7.6 5.3 0.89 7.9 1.7 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF515) SKA2 PF16740.5 gi|568164814|ref|YP_008947082.1| - 0.092 12.5 0.0 0.21 11.4 0.0 1.5 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 2 Neur PF00064.18 gi|568164815|ref|YP_008947083.1| - 0.059 12.1 0.0 0.059 12.1 0.0 1.1 1 0 0 1 1 1 0 Neuraminidase Acyltransf_C PF16076.5 gi|568164815|ref|YP_008947083.1| - 0.085 13.0 0.0 0.19 11.8 0.0 1.5 1 1 0 1 1 1 0 Acyltransferase C-terminus EF-hand_5 PF13202.6 gi|568164815|ref|YP_008947083.1| - 0.29 10.7 2.4 35 4.1 0.3 3.2 3 0 0 3 3 3 0 EF hand Pkinase PF00069.25 gi|568164816|ref|YP_008947084.1| - 7.1e-35 120.6 0.0 1e-34 120.1 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 gi|568164816|ref|YP_008947084.1| - 4.4e-17 62.2 0.0 1.1e-16 61.0 0.0 1.6 1 1 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 gi|568164816|ref|YP_008947084.1| - 0.00036 19.9 0.0 0.00058 19.3 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 gi|568164816|ref|YP_008947084.1| - 0.024 14.3 0.0 0.089 12.4 0.0 1.8 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 Kinase-like PF14531.6 gi|568164816|ref|YP_008947084.1| - 0.029 13.7 0.0 0.16 11.3 0.0 1.9 1 1 0 1 1 1 0 Kinase-like GTP_EFTU_D2 PF03144.25 gi|568164816|ref|YP_008947084.1| - 0.071 13.5 1.4 1.2 9.6 0.5 3.3 2 1 1 3 3 3 0 Elongation factor Tu domain 2 Methyltr_RsmB-F PF01189.17 gi|568163705|ref|YP_008947085.1| - 1.2e-33 116.5 0.0 1.9e-33 115.8 0.0 1.3 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltransf_31 PF13847.6 gi|568163705|ref|YP_008947085.1| - 1.2e-09 38.1 0.0 3.7e-09 36.5 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain PCMT PF01135.19 gi|568163705|ref|YP_008947085.1| - 3.3e-08 33.6 0.0 5.4e-08 32.8 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_25 PF13649.6 gi|568163705|ref|YP_008947085.1| - 2.1e-07 31.5 0.1 9.3e-06 26.3 0.0 2.8 3 0 0 3 3 3 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|568163705|ref|YP_008947085.1| - 0.0002 20.9 0.5 0.0012 18.3 0.1 2.0 2 0 0 2 2 2 1 Putative methyltransferase Ubie_methyltran PF01209.18 gi|568163705|ref|YP_008947085.1| - 0.00025 20.5 0.1 0.0021 17.4 0.1 2.1 1 1 1 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_11 PF08241.12 gi|568163705|ref|YP_008947085.1| - 0.00035 21.2 0.0 0.0063 17.1 0.0 2.7 3 0 0 3 3 3 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|568163705|ref|YP_008947085.1| - 0.0099 15.7 0.0 0.018 14.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain FtsJ PF01728.19 gi|568163705|ref|YP_008947085.1| - 0.061 13.4 0.0 0.17 12.0 0.0 2.0 1 1 0 2 2 2 0 FtsJ-like methyltransferase CMAS PF02353.20 gi|568163705|ref|YP_008947085.1| - 0.067 12.5 0.0 0.12 11.7 0.0 1.4 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Fibrillarin PF01269.17 gi|568163705|ref|YP_008947085.1| - 0.096 11.8 0.0 0.16 11.0 0.0 1.3 1 0 0 1 1 1 0 Fibrillarin YceG PF02618.16 gi|568163705|ref|YP_008947085.1| - 0.16 11.5 0.0 0.26 10.8 0.0 1.3 1 0 0 1 1 1 0 YceG-like family Methyltr_RsmF_N PF17125.5 gi|568163705|ref|YP_008947085.1| - 0.16 12.5 0.0 0.31 11.5 0.0 1.6 1 0 0 1 1 1 0 N-terminal domain of 16S rRNA methyltransferase RsmF Radical_SAM_C PF16199.5 gi|568163706|ref|YP_008947086.1| - 1.7e-27 95.3 0.3 3.1e-27 94.4 0.3 1.5 1 0 0 1 1 1 1 Radical_SAM C-terminal domain Radical_SAM PF04055.21 gi|568163706|ref|YP_008947086.1| - 5.2e-22 79.0 0.0 1e-21 78.1 0.0 1.5 1 0 0 1 1 1 1 Radical SAM superfamily Acetyltransf_1 PF00583.25 gi|568163706|ref|YP_008947086.1| - 1.3e-07 31.9 0.1 2.6e-07 30.9 0.1 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|568163706|ref|YP_008947086.1| - 0.0042 17.0 0.1 0.046 13.7 0.1 2.3 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Sugar_tr PF00083.24 gi|568163707|ref|YP_008947087.1| - 9.7e-49 166.4 28.9 1.4e-48 165.9 28.9 1.2 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|568163707|ref|YP_008947087.1| - 7.9e-25 87.5 32.1 7.9e-25 87.5 32.1 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily RHH_1 PF01402.21 gi|568164817|ref|YP_008947088.1| - 0.084 12.8 0.5 0.1 12.6 0.5 1.3 1 0 0 1 1 1 0 Ribbon-helix-helix protein, copG family MJ1316 PF04457.12 gi|568163709|ref|YP_008947091.1| - 1.4e-12 48.1 1.5 1.6e-12 48.0 1.5 1.0 1 0 0 1 1 1 1 MJ1316 RNA cyclic group end recognition domain Thermopsin PF05317.11 gi|568163710|ref|YP_008947092.1| - 1.3e-64 218.2 20.0 1.3e-64 218.2 20.0 2.4 2 1 1 3 3 3 1 Thermopsin AAA_31 PF13614.6 gi|568164819|ref|YP_008947093.1| - 1.4e-11 44.6 0.0 4.1e-11 43.1 0.0 1.8 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|568164819|ref|YP_008947093.1| - 3.9e-10 39.9 0.0 8.2e-10 38.8 0.0 1.8 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|568164819|ref|YP_008947093.1| - 3.2e-06 26.8 2.9 5.4e-06 26.0 1.4 2.1 3 0 0 3 3 3 1 NUBPL iron-transfer P-loop NTPase ArsA_ATPase PF02374.15 gi|568164819|ref|YP_008947093.1| - 0.00017 20.9 0.2 0.00042 19.6 0.2 1.7 1 0 0 1 1 1 1 Anion-transporting ATPase CBP_BcsQ PF06564.12 gi|568164819|ref|YP_008947093.1| - 0.00021 20.9 0.4 0.00046 19.8 0.4 1.6 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsQ Fer4_NifH PF00142.18 gi|568164819|ref|YP_008947093.1| - 0.001 18.6 0.7 0.004 16.6 0.1 2.3 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family MipZ PF09140.11 gi|568164819|ref|YP_008947093.1| - 0.0047 16.2 0.1 0.0092 15.3 0.1 1.5 1 0 0 1 1 1 1 ATPase MipZ VirC1 PF07015.11 gi|568164819|ref|YP_008947093.1| - 0.04 13.2 0.1 0.087 12.1 0.1 1.4 1 0 0 1 1 1 0 VirC1 protein Glyco_trans_2_3 PF13632.6 gi|568163711|ref|YP_008947094.1| - 2.3e-26 93.0 0.0 2.3e-26 93.0 0.0 2.7 3 0 0 3 3 3 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 gi|568163711|ref|YP_008947094.1| - 1.3e-24 87.3 0.0 1.7e-24 87.0 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_2 PF00535.26 gi|568163711|ref|YP_008947094.1| - 3.2e-16 59.6 0.1 4.4e-16 59.2 0.1 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.6 gi|568163711|ref|YP_008947094.1| - 1e-14 54.4 0.0 1.6e-14 53.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 21 Cellulose_synt PF03552.14 gi|568163711|ref|YP_008947094.1| - 0.017 13.7 15.4 0.057 11.9 11.6 2.8 1 1 1 2 2 2 0 Cellulose synthase Glyco_tranf_2_2 PF10111.9 gi|568163711|ref|YP_008947094.1| - 0.06 12.8 0.1 0.093 12.2 0.1 1.2 1 0 0 1 1 1 0 Glycosyltransferase like family 2 GYD PF08734.11 gi|568163712|ref|YP_008947095.1| - 4.9e-26 90.5 0.1 5.6e-26 90.3 0.1 1.0 1 0 0 1 1 1 1 GYD domain AsnC_trans_reg PF01037.21 gi|568163712|ref|YP_008947095.1| - 5.3e-06 26.3 0.1 8.6e-06 25.6 0.1 1.4 1 1 0 1 1 1 1 Lrp/AsnC ligand binding domain DUF3477 PF11963.8 gi|568163712|ref|YP_008947095.1| - 0.063 12.5 0.0 0.075 12.2 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3477) DUF3232 PF11554.8 gi|568164820|ref|YP_008947096.1| - 0.012 16.0 0.3 0.17 12.3 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3232) AMP-binding PF00501.28 gi|568163713|ref|YP_008947097.1| - 6e-86 288.7 0.0 7.5e-86 288.3 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|568163713|ref|YP_008947097.1| - 1.3e-21 77.3 0.1 3.1e-21 76.1 0.1 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain FTP PF07504.13 gi|568163713|ref|YP_008947097.1| - 0.069 13.0 0.0 0.2 11.5 0.0 1.8 2 0 0 2 2 2 0 Fungalysin/Thermolysin Propeptide Motif YdjM PF04307.14 gi|568163714|ref|YP_008947098.1| - 2.1e-11 43.4 5.2 3.5e-10 39.4 4.6 2.7 1 1 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase DUF4184 PF13803.6 gi|568163714|ref|YP_008947098.1| - 0.018 14.8 0.0 0.018 14.8 0.0 2.9 2 1 1 3 3 3 0 Domain of unknown function (DUF4184) DUF1129 PF06570.11 gi|568163714|ref|YP_008947098.1| - 0.64 9.5 4.9 1.2 8.5 4.9 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1129) DUF5442 PF17514.2 gi|568164821|ref|YP_008947099.1| - 0.011 15.9 0.2 0.013 15.7 0.2 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5442) MREG PF15812.5 gi|568164821|ref|YP_008947099.1| - 0.053 13.8 0.3 0.053 13.8 0.3 1.0 1 0 0 1 1 1 0 Melanoregulin Pyridoxal_deC PF00282.19 gi|568163715|ref|YP_008947100.1| - 6.3e-19 67.9 0.0 1.2e-18 67.1 0.0 1.4 1 0 0 1 1 1 1 Pyridoxal-dependent decarboxylase conserved domain Aminotran_5 PF00266.19 gi|568163715|ref|YP_008947100.1| - 3.6e-10 39.3 0.0 1.1e-09 37.7 0.0 1.7 1 1 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 gi|568163715|ref|YP_008947100.1| - 5.2e-08 32.5 0.0 2.8e-06 26.7 0.0 2.1 2 0 0 2 2 2 2 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|568163715|ref|YP_008947100.1| - 7.1e-05 22.3 0.0 0.00011 21.7 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 gi|568163715|ref|YP_008947100.1| - 0.0022 16.6 0.0 0.0036 15.9 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme FGGY_N PF00370.21 gi|568163716|ref|YP_008947101.1| - 1.7e-37 129.3 0.0 3e-37 128.5 0.0 1.4 1 1 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.16 gi|568163716|ref|YP_008947101.1| - 1.5e-25 90.1 0.0 2.3e-25 89.5 0.0 1.2 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain MreB_Mbl PF06723.13 gi|568163716|ref|YP_008947101.1| - 0.0018 17.2 0.2 0.035 12.9 0.1 2.1 2 0 0 2 2 2 1 MreB/Mbl protein Hydantoinase_A PF01968.18 gi|568163716|ref|YP_008947101.1| - 0.042 13.1 0.1 0.41 9.9 0.1 2.3 3 0 0 3 3 3 0 Hydantoinase/oxoprolinase Raco_middle PF17651.1 gi|568163716|ref|YP_008947101.1| - 0.1 12.3 0.0 1 9.0 0.0 2.2 2 0 0 2 2 2 0 RACo middle region MFS_1 PF07690.16 gi|568164822|ref|YP_008947102.1| - 5.1e-32 111.2 41.4 6.4e-32 110.9 41.4 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|568164822|ref|YP_008947102.1| - 2e-08 33.6 27.5 7.5e-05 21.8 6.9 2.6 1 1 2 3 3 3 2 Sugar (and other) transporter MFS_1_like PF12832.7 gi|568164822|ref|YP_008947102.1| - 0.096 11.5 24.4 2.4 6.9 24.0 2.7 1 1 0 1 1 1 0 MFS_1 like family DUF973 PF06157.11 gi|568164823|ref|YP_008947103.1| - 8.7e-62 208.9 41.4 1.2e-60 205.2 41.4 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF973) DUF1232 PF06803.12 gi|568164823|ref|YP_008947103.1| - 0.071 12.9 3.1 0.2 11.5 3.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1232) UbiA PF01040.18 gi|568164823|ref|YP_008947103.1| - 0.58 9.4 6.7 1 8.6 5.8 1.7 1 1 0 1 1 1 0 UbiA prenyltransferase family DUF996 PF06195.13 gi|568164823|ref|YP_008947103.1| - 1.1 9.6 22.3 2.1 8.6 2.5 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF996) DUF2304 PF10066.9 gi|568164823|ref|YP_008947103.1| - 1.2 9.4 9.5 5.7 7.2 0.7 2.7 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2304) DUF4134 PF13572.6 gi|568164823|ref|YP_008947103.1| - 2.2 8.7 9.2 3.2 8.1 7.5 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4134) FNIP PF05725.12 gi|568164824|ref|YP_008947104.1| - 7.7 6.8 8.3 8.9 6.6 0.1 3.7 4 0 0 4 4 4 0 FNIP Repeat Cas_NE0113 PF09623.10 gi|568163717|ref|YP_008947107.1| - 6.8e-10 39.0 0.0 8.4e-10 38.7 0.0 1.2 1 0 0 1 1 1 1 CRISPR-associated protein NE0113 (Cas_NE0113) Cas_Cas02710 PF09670.10 gi|568163717|ref|YP_008947107.1| - 0.0014 17.5 0.0 0.0019 17.1 0.0 1.3 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Cas02710) LDcluster4 PF18306.1 gi|568163717|ref|YP_008947107.1| - 0.0042 16.7 0.0 0.0056 16.3 0.0 1.2 1 0 0 1 1 1 1 SLOG cluster4 family Abhydrolase_6 PF12697.7 gi|568164827|ref|YP_008947108.1| - 1.6e-19 71.4 0.0 1.9e-19 71.1 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|568164827|ref|YP_008947108.1| - 1.5e-18 67.4 0.8 3.9e-10 39.8 0.0 2.9 2 1 1 3 3 3 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|568164827|ref|YP_008947108.1| - 3.8e-09 36.2 0.0 5.5e-09 35.6 0.0 1.3 1 1 0 1 1 1 1 Serine aminopeptidase, S33 LIDHydrolase PF10230.9 gi|568164827|ref|YP_008947108.1| - 0.00015 21.4 0.1 0.00027 20.6 0.1 1.3 1 1 0 1 1 1 1 Lipid-droplet associated hydrolase Abhydrolase_4 PF08386.10 gi|568164827|ref|YP_008947108.1| - 0.0043 17.2 0.0 0.0064 16.6 0.0 1.3 1 0 0 1 1 1 1 TAP-like protein Ndr PF03096.14 gi|568164827|ref|YP_008947108.1| - 0.15 10.8 0.0 0.31 9.7 0.0 1.6 1 1 0 1 1 1 0 Ndr family Abhydrolase_5 PF12695.7 gi|568164827|ref|YP_008947108.1| - 0.15 11.8 0.0 1.6 8.5 0.0 2.4 3 0 0 3 3 3 0 Alpha/beta hydrolase family DUF2207 PF09972.9 gi|568164828|ref|YP_008947109.1| - 0.03 13.1 2.6 0.036 12.8 2.6 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF2070 PF09843.9 gi|568164828|ref|YP_008947109.1| - 0.2 9.9 7.6 0.24 9.6 7.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Acyl-CoA_dh_N PF02771.16 gi|568163718|ref|YP_008947111.1| - 4.9e-24 85.2 0.0 9.2e-24 84.3 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|568163718|ref|YP_008947111.1| - 4e-20 71.8 0.0 6.9e-20 71.0 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_1 PF00441.24 gi|568163718|ref|YP_008947111.1| - 6.1e-14 52.5 0.1 1.2e-07 32.1 0.0 2.3 1 1 1 2 2 2 2 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_ox_N PF14749.6 gi|568163718|ref|YP_008947111.1| - 0.1 13.2 0.0 0.2 12.2 0.0 1.6 1 1 0 1 1 1 0 Acyl-coenzyme A oxidase N-terminal MaoC_dehydratas PF01575.19 gi|568163719|ref|YP_008947112.1| - 1.3e-16 60.2 0.0 1.8e-16 59.8 0.0 1.1 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 gi|568163719|ref|YP_008947112.1| - 3.9e-10 40.0 0.0 4.9e-10 39.6 0.0 1.1 1 0 0 1 1 1 1 N-terminal half of MaoC dehydratase S1 PF00575.23 gi|568163719|ref|YP_008947112.1| - 0.016 15.6 0.1 0.03 14.7 0.1 1.5 1 0 0 1 1 1 0 S1 RNA binding domain Acyl-CoA_dh_1 PF00441.24 gi|568163720|ref|YP_008947113.1| - 2.3e-08 34.4 0.0 2e-06 28.1 0.0 2.1 2 0 0 2 2 2 2 Acyl-CoA dehydrogenase, C-terminal domain Amidohydro_3 PF07969.11 gi|568163721|ref|YP_008947114.1| - 7.8e-29 101.5 0.0 6.2e-25 88.6 0.0 2.3 1 1 1 2 2 2 2 Amidohydrolase family Amidohydro_1 PF01979.20 gi|568163721|ref|YP_008947114.1| - 2.2e-13 50.3 0.0 3.9e-13 49.4 0.0 1.4 1 1 0 1 1 1 1 Amidohydrolase family UPF0547 PF10571.9 gi|568164830|ref|YP_008947115.1| - 5.1e-06 26.5 1.5 7.6e-06 25.9 1.5 1.3 1 0 0 1 1 1 1 Uncharacterised protein family UPF0547 zf-ribbon_3 PF13248.6 gi|568164830|ref|YP_008947115.1| - 1e-05 24.8 2.3 1.5e-05 24.2 2.3 1.3 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|568164830|ref|YP_008947115.1| - 1.1e-05 25.0 4.1 1.5e-05 24.5 4.1 1.2 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|568164830|ref|YP_008947115.1| - 0.00024 21.1 1.3 0.00038 20.4 1.3 1.2 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_15 PF17032.5 gi|568164830|ref|YP_008947115.1| - 0.039 14.7 2.7 0.059 14.1 2.7 1.3 1 0 0 1 1 1 0 zinc-ribbon family zf_UBZ PF18439.1 gi|568164830|ref|YP_008947115.1| - 0.1 12.2 0.1 0.17 11.5 0.1 1.3 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger Tetraspanin PF00335.20 gi|568163722|ref|YP_008947116.1| - 8.5 6.0 8.2 4.3 7.0 4.9 1.8 1 1 1 2 2 2 0 Tetraspanin family DrsE PF02635.15 gi|568163723|ref|YP_008947117.1| - 1.1e-05 25.8 0.0 1.6e-05 25.2 0.0 1.2 1 0 0 1 1 1 1 DsrE/DsrF-like family DUF2537 PF10801.8 gi|568163724|ref|YP_008947118.1| - 0.16 12.2 10.5 0.047 13.9 2.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2537) COX15-CtaA PF02628.15 gi|568163724|ref|YP_008947118.1| - 0.33 10.0 13.4 0.27 10.2 9.9 1.9 1 1 1 2 2 2 0 Cytochrome oxidase assembly protein OST3_OST6 PF04756.13 gi|568163724|ref|YP_008947118.1| - 0.39 10.0 3.2 0.5 9.7 3.2 1.2 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family Protocadherin PF08374.11 gi|568163724|ref|YP_008947118.1| - 0.46 10.4 1.4 0.61 10.0 1.4 1.2 1 0 0 1 1 1 0 Protocadherin VIT1 PF01988.19 gi|568163724|ref|YP_008947118.1| - 0.62 9.9 5.0 2.5 7.9 2.6 2.2 2 0 0 2 2 2 0 VIT family DUF2070 PF09843.9 gi|568163724|ref|YP_008947118.1| - 7 4.8 10.7 8 4.6 10.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) 3HCDH_N PF02737.18 gi|568163726|ref|YP_008947120.1| - 3.3e-64 216.1 0.2 4.4e-64 215.7 0.2 1.2 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 gi|568163726|ref|YP_008947120.1| - 5e-46 155.3 1.2 1.7e-22 79.9 0.2 2.9 3 0 0 3 3 3 2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NAD_binding_2 PF03446.15 gi|568163726|ref|YP_008947120.1| - 0.0005 20.3 0.1 0.00099 19.3 0.1 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|568163726|ref|YP_008947120.1| - 0.0068 17.0 0.1 0.018 15.6 0.1 1.8 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent LigA PF07746.11 gi|568163726|ref|YP_008947120.1| - 0.097 12.8 0.1 2.4 8.4 0.0 2.3 2 0 0 2 2 2 0 Aromatic-ring-opening dioxygenase LigAB, LigA subunit NAD_binding_7 PF13241.6 gi|568163726|ref|YP_008947120.1| - 0.17 12.3 0.1 0.3 11.5 0.1 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding Glu_dehyd_C PF16912.5 gi|568163728|ref|YP_008947122.1| - 1.2e-23 83.7 0.0 1.8e-23 83.1 0.0 1.3 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_N PF08240.12 gi|568163728|ref|YP_008947122.1| - 1.1e-18 67.0 0.1 1.8e-18 66.4 0.1 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|568163728|ref|YP_008947122.1| - 1.3e-05 25.2 0.0 2.3e-05 24.4 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase 2-Hacid_dh_C PF02826.19 gi|568163728|ref|YP_008947122.1| - 0.026 13.9 0.0 0.053 12.9 0.0 1.5 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 gi|568163728|ref|YP_008947122.1| - 0.03 14.4 0.0 0.13 12.4 0.0 2.0 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase AlaDh_PNT_C PF01262.21 gi|568163728|ref|YP_008947122.1| - 0.19 11.0 0.0 0.3 10.4 0.0 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain AMP-binding PF00501.28 gi|568163729|ref|YP_008947123.1| - 1.4e-77 261.1 0.0 1.7e-77 260.9 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|568163729|ref|YP_008947123.1| - 1.1e-16 61.5 0.0 3.2e-16 60.1 0.0 1.8 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Hormone_3 PF00159.18 gi|568163729|ref|YP_008947123.1| - 0.12 12.5 0.0 0.35 11.0 0.0 1.8 1 0 0 1 1 1 0 Pancreatic hormone peptide MaoC_dehydratas PF01575.19 gi|568163730|ref|YP_008947124.1| - 6e-16 58.1 0.0 8.5e-16 57.6 0.0 1.2 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 gi|568163730|ref|YP_008947124.1| - 0.003 17.7 0.0 0.0043 17.2 0.0 1.5 1 1 0 1 1 1 1 N-terminal half of MaoC dehydratase CoA_transf_3 PF02515.17 gi|568163731|ref|YP_008947125.1| - 2.5e-91 306.6 0.0 3.1e-91 306.3 0.0 1.0 1 0 0 1 1 1 1 CoA-transferase family III Sulfolobus_pRN PF05584.11 gi|568163731|ref|YP_008947125.1| - 0.039 14.0 0.3 0.082 13.0 0.3 1.5 1 0 0 1 1 1 0 Sulfolobus plasmid regulatory protein MFS_1 PF07690.16 gi|568164831|ref|YP_008947126.1| - 2.7e-22 79.2 54.0 1.8e-19 69.9 43.4 2.4 1 1 2 3 3 3 3 Major Facilitator Superfamily Transp_cyt_pur PF02133.15 gi|568164832|ref|YP_008947127.1| - 0.0099 14.7 3.4 0.21 10.3 0.1 2.0 1 1 1 2 2 2 2 Permease for cytosine/purines, uracil, thiamine, allantoin DUF973 PF06157.11 gi|568164832|ref|YP_008947127.1| - 0.15 11.0 9.1 0.17 10.9 9.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF973) DUF5357 PF17310.2 gi|568164832|ref|YP_008947127.1| - 0.29 9.6 1.2 0.32 9.5 1.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5357) 7TMR-DISM_7TM PF07695.11 gi|568164832|ref|YP_008947127.1| - 0.3 11.0 4.1 0.35 10.7 4.1 1.2 1 1 0 1 1 1 0 7TM diverse intracellular signalling DUF2371 PF10177.9 gi|568164832|ref|YP_008947127.1| - 0.35 11.0 5.6 0.27 11.4 1.5 1.9 1 1 1 2 2 2 0 Uncharacterised conserved protein (DUF2371) DUF3040 PF11239.8 gi|568164832|ref|YP_008947127.1| - 0.77 10.1 4.8 0.99 9.7 4.8 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) Phage_holin_2_4 PF16082.5 gi|568164832|ref|YP_008947127.1| - 2.2 8.1 6.6 1.3 8.8 2.6 1.9 1 1 1 2 2 2 0 Bacteriophage holin family, superfamily II-like PGPGW PF09656.10 gi|568164832|ref|YP_008947127.1| - 3.1 7.4 9.1 0.57 9.7 2.4 2.2 2 0 0 2 2 2 0 Putative transmembrane protein (PGPGW) Fe-ADH PF00465.19 gi|568163732|ref|YP_008947128.1| - 8.5e-44 149.8 0.0 1.3e-43 149.2 0.0 1.2 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 gi|568163732|ref|YP_008947128.1| - 8e-08 32.3 0.0 1.1e-07 31.8 0.0 1.2 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase HTH_24 PF13412.6 gi|568163733|ref|YP_008947129.1| - 2.6e-13 49.3 2.2 2.6e-13 49.3 2.2 2.3 3 0 0 3 3 2 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|568163733|ref|YP_008947129.1| - 5.1e-12 45.4 0.3 1.6e-11 43.9 0.1 2.0 2 0 0 2 2 1 1 AsnC-type helix-turn-helix domain AsnC_trans_reg PF01037.21 gi|568163733|ref|YP_008947129.1| - 2.8e-07 30.4 0.0 4.6e-07 29.7 0.0 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain Sigma70_r4 PF04545.16 gi|568163733|ref|YP_008947129.1| - 1e-05 25.0 0.0 6.6e-05 22.4 0.0 2.3 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_20 PF12840.7 gi|568163733|ref|YP_008947129.1| - 1.5e-05 24.9 0.0 2.9e-05 24.0 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 gi|568163733|ref|YP_008947129.1| - 4.5e-05 23.1 0.3 0.0031 17.2 0.0 3.2 3 1 0 3 3 3 1 Homeodomain-like domain Sigma70_r4_2 PF08281.12 gi|568163733|ref|YP_008947129.1| - 0.00059 19.5 0.1 0.0028 17.3 0.0 2.1 2 0 0 2 2 2 1 Sigma-70, region 4 MarR PF01047.22 gi|568163733|ref|YP_008947129.1| - 0.00083 19.2 0.1 0.0035 17.2 0.0 1.9 2 0 0 2 2 2 1 MarR family HTH_11 PF08279.12 gi|568163733|ref|YP_008947129.1| - 0.00093 19.1 0.2 0.0023 17.8 0.2 1.7 1 0 0 1 1 1 1 HTH domain HTH_30 PF13556.6 gi|568163733|ref|YP_008947129.1| - 0.0012 18.6 0.0 0.008 16.0 0.0 2.3 2 0 0 2 2 2 1 PucR C-terminal helix-turn-helix domain HTH_8 PF02954.19 gi|568163733|ref|YP_008947129.1| - 0.0021 17.8 0.0 0.025 14.4 0.1 2.3 2 0 0 2 2 2 1 Bacterial regulatory protein, Fis family MarR_2 PF12802.7 gi|568163733|ref|YP_008947129.1| - 0.0022 17.8 0.0 0.012 15.5 0.0 2.0 2 0 0 2 2 2 1 MarR family HTH_5 PF01022.20 gi|568163733|ref|YP_008947129.1| - 0.0027 17.5 0.0 0.0071 16.2 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_IclR PF09339.10 gi|568163733|ref|YP_008947129.1| - 0.0047 16.7 0.0 0.015 15.1 0.0 1.9 2 0 0 2 2 2 1 IclR helix-turn-helix domain MerR PF00376.23 gi|568163733|ref|YP_008947129.1| - 0.0072 16.1 0.1 0.075 12.8 0.0 2.5 2 1 0 2 2 2 1 MerR family regulatory protein HTH_10 PF04967.12 gi|568163733|ref|YP_008947129.1| - 0.0096 15.7 0.1 0.035 13.9 0.0 1.9 2 0 0 2 2 2 1 HTH DNA binding domain HTH_DeoR PF08220.12 gi|568163733|ref|YP_008947129.1| - 0.011 15.5 0.0 0.073 12.8 0.1 2.2 2 0 0 2 2 2 0 DeoR-like helix-turn-helix domain HTH_28 PF13518.6 gi|568163733|ref|YP_008947129.1| - 0.012 15.7 0.0 0.57 10.4 0.0 2.7 3 0 0 3 3 3 0 Helix-turn-helix domain MerR_1 PF13411.6 gi|568163733|ref|YP_008947129.1| - 0.015 15.4 0.1 1.7 8.8 0.0 3.1 3 1 1 4 4 4 0 MerR HTH family regulatory protein HTH_27 PF13463.6 gi|568163733|ref|YP_008947129.1| - 0.017 15.6 0.1 0.13 12.8 0.1 2.1 2 0 0 2 2 2 0 Winged helix DNA-binding domain Fe_dep_repress PF01325.19 gi|568163733|ref|YP_008947129.1| - 0.022 14.9 0.3 0.2 11.9 0.0 2.4 3 0 0 3 3 2 0 Iron dependent repressor, N-terminal DNA binding domain DUF742 PF05331.11 gi|568163733|ref|YP_008947129.1| - 0.047 13.5 0.0 0.075 12.8 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF742) HTH_12 PF08461.10 gi|568163733|ref|YP_008947129.1| - 0.058 13.4 0.9 0.41 10.6 0.5 2.3 2 1 0 2 2 2 0 Ribonuclease R winged-helix domain HTH_38 PF13936.6 gi|568163733|ref|YP_008947129.1| - 0.098 12.4 2.5 0.84 9.5 0.2 2.8 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|568163733|ref|YP_008947129.1| - 0.12 12.4 0.1 0.36 10.8 0.1 1.8 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_3 PF01381.22 gi|568163733|ref|YP_008947129.1| - 0.12 12.4 0.6 1.4 9.0 0.0 2.8 3 0 0 3 3 3 0 Helix-turn-helix Phage_CI_repr PF07022.13 gi|568163733|ref|YP_008947129.1| - 0.18 11.9 0.0 0.6 10.2 0.0 1.9 2 0 0 2 2 2 0 Bacteriophage CI repressor helix-turn-helix domain TPP_enzyme_C PF02775.21 gi|568163734|ref|YP_008947130.1| - 1.3e-17 64.0 0.1 1.8e-17 63.6 0.1 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DXP_synthase_N PF13292.6 gi|568163734|ref|YP_008947130.1| - 0.00094 18.5 0.0 0.0041 16.4 0.0 1.9 2 0 0 2 2 2 1 1-deoxy-D-xylulose-5-phosphate synthase DUF981 PF06168.11 gi|568163734|ref|YP_008947130.1| - 0.12 12.3 0.9 0.28 11.1 0.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF981) POR_N PF01855.19 gi|568163735|ref|YP_008947131.1| - 2e-62 211.0 0.1 2.6e-62 210.6 0.1 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PFOR_II PF17147.4 gi|568163735|ref|YP_008947131.1| - 1.3e-32 112.2 0.1 2.4e-32 111.3 0.1 1.5 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Transketolase_C PF02780.20 gi|568163735|ref|YP_008947131.1| - 4.5e-07 29.8 0.0 1.3e-06 28.3 0.0 1.8 1 0 0 1 1 1 1 Transketolase, C-terminal domain TPP_enzyme_N PF02776.18 gi|568163735|ref|YP_008947131.1| - 0.0018 17.9 0.9 0.0031 17.1 0.9 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Fer4_21 PF14697.6 gi|568163736|ref|YP_008947132.1| - 1.7e-12 47.3 14.0 2.5e-12 46.7 14.0 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|568163736|ref|YP_008947132.1| - 2.9e-09 36.4 19.2 1.5e-05 24.6 5.7 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|568163736|ref|YP_008947132.1| - 1e-06 29.2 10.6 2.3e-06 28.1 10.6 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|568163736|ref|YP_008947132.1| - 1.5e-05 25.8 7.9 0.0019 19.1 0.5 2.5 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_8 PF13183.6 gi|568163736|ref|YP_008947132.1| - 3e-05 24.4 5.2 0.0054 17.1 0.3 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|568163736|ref|YP_008947132.1| - 5.7e-05 23.0 12.0 0.0025 17.8 2.0 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|568163736|ref|YP_008947132.1| - 7.2e-05 23.2 6.8 0.11 13.1 0.8 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|568163736|ref|YP_008947132.1| - 0.0009 19.4 15.1 0.0017 18.5 15.1 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|568163736|ref|YP_008947132.1| - 0.0011 19.0 14.7 0.015 15.4 2.7 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|568163736|ref|YP_008947132.1| - 0.0095 16.5 18.1 0.014 15.9 5.4 2.6 2 1 1 3 3 3 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 gi|568163736|ref|YP_008947132.1| - 0.014 16.2 0.5 0.014 16.2 0.5 2.3 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|568163736|ref|YP_008947132.1| - 0.054 14.0 17.5 0.46 11.1 4.5 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_6 PF12837.7 gi|568163736|ref|YP_008947132.1| - 0.094 12.8 20.7 0.09 12.9 7.9 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|568163736|ref|YP_008947132.1| - 2.3 8.4 11.5 2.9 8.1 0.6 2.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain DEAD PF00270.29 gi|568163737|ref|YP_008947133.1| - 7.8e-44 149.5 0.1 2.6e-43 147.8 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|568163737|ref|YP_008947133.1| - 2e-31 108.6 0.4 3.5e-30 104.6 0.2 2.4 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|568163737|ref|YP_008947133.1| - 3e-10 40.3 0.0 5.8e-10 39.4 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_19 PF13245.6 gi|568163737|ref|YP_008947133.1| - 0.0078 16.5 0.2 0.17 12.2 0.1 2.8 1 1 1 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|568163737|ref|YP_008947133.1| - 0.01 16.1 2.8 0.27 11.5 2.8 2.9 1 1 0 1 1 1 0 AAA domain CMS1 PF14617.6 gi|568163737|ref|YP_008947133.1| - 0.014 14.8 0.0 0.027 13.8 0.0 1.5 1 0 0 1 1 1 0 U3-containing 90S pre-ribosomal complex subunit Flavi_DEAD PF07652.14 gi|568163737|ref|YP_008947133.1| - 0.036 14.0 0.0 0.17 11.9 0.0 2.1 1 1 0 1 1 1 0 Flavivirus DEAD domain AAA_30 PF13604.6 gi|568163737|ref|YP_008947133.1| - 0.052 13.3 0.0 0.16 11.7 0.0 1.8 2 0 0 2 2 2 0 AAA domain T4SS-DNA_transf PF02534.14 gi|568163737|ref|YP_008947133.1| - 0.064 12.1 0.0 0.12 11.1 0.0 1.4 1 0 0 1 1 1 0 Type IV secretory system Conjugative DNA transfer DUF202 PF02656.15 gi|568163738|ref|YP_008947134.1| - 2.4e-22 79.1 4.0 1e-21 77.1 0.4 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF202) SdpI PF13630.6 gi|568163738|ref|YP_008947134.1| - 0.0093 16.1 4.5 0.017 15.3 0.5 2.1 2 0 0 2 2 2 1 SdpI/YhfL protein family SfLAP PF11139.8 gi|568163738|ref|YP_008947134.1| - 0.011 15.2 2.9 0.027 13.9 2.9 1.6 1 1 0 1 1 1 0 Sap, sulfolipid-1-addressing protein CopD PF05425.13 gi|568163738|ref|YP_008947134.1| - 0.013 15.9 1.5 0.028 14.8 1.4 1.6 1 1 0 1 1 1 0 Copper resistance protein D Claudin_2 PF13903.6 gi|568163738|ref|YP_008947134.1| - 0.33 10.7 3.4 0.89 9.3 2.9 1.8 1 1 0 1 1 1 0 PMP-22/EMP/MP20/Claudin tight junction Tetraspanin PF00335.20 gi|568163738|ref|YP_008947134.1| - 0.37 10.5 4.5 0.15 11.8 0.5 1.8 1 1 0 1 1 1 0 Tetraspanin family YtpI PF14007.6 gi|568163738|ref|YP_008947134.1| - 3.9 7.7 9.0 1 9.6 3.0 2.1 1 1 1 2 2 2 0 YtpI-like protein Phage_holin_3_6 PF07332.11 gi|568163738|ref|YP_008947134.1| - 9.3 6.3 12.2 0.38 10.8 0.6 2.1 1 1 1 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III EamA PF00892.20 gi|568163739|ref|YP_008947135.1| - 6.6e-23 81.4 45.4 2.9e-17 63.1 16.7 2.3 2 0 0 2 2 2 2 EamA-like transporter family SIS PF01380.22 gi|568163741|ref|YP_008947137.1| - 1.8e-15 57.0 0.2 9e-09 35.3 0.3 2.7 2 1 0 2 2 2 2 SIS domain DUF5412 PF17428.2 gi|568163742|ref|YP_008947138.1| - 0.028 14.3 0.3 0.03 14.1 0.3 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5412) UvdE PF03851.14 gi|568163743|ref|YP_008947139.1| - 1.9e-61 207.7 0.2 2.3e-61 207.5 0.2 1.1 1 0 0 1 1 1 1 UV-endonuclease UvdE Lactate_perm PF02652.14 gi|568163744|ref|YP_008947140.1| - 4.9e-106 355.5 36.3 7.5e-106 354.9 36.3 1.2 1 0 0 1 1 1 1 L-lactate permease Aldedh PF00171.22 gi|568163745|ref|YP_008947141.1| - 3.5e-152 507.1 0.0 4.1e-152 506.9 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family PEPCK_GTP PF00821.18 gi|568163746|ref|YP_008947142.1| - 3e-105 352.0 0.0 3.7e-105 351.7 0.0 1.1 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain PEPCK_N PF17297.2 gi|568163746|ref|YP_008947142.1| - 9.9e-58 195.3 0.0 1.3e-57 194.9 0.0 1.2 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxykinase N-terminal domain FolB PF02152.18 gi|568163747|ref|YP_008947143.1| - 1.7e-29 102.6 0.2 3.1e-29 101.8 0.2 1.4 1 0 0 1 1 1 1 Dihydroneopterin aldolase HPPK PF01288.20 gi|568163747|ref|YP_008947143.1| - 4.3e-27 94.8 0.0 6.6e-27 94.2 0.0 1.3 1 0 0 1 1 1 1 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Prefoldin PF02996.17 gi|568163747|ref|YP_008947143.1| - 0.061 13.2 0.1 0.14 12.0 0.1 1.7 1 0 0 1 1 1 0 Prefoldin subunit IF2_assoc PF08364.11 gi|568163747|ref|YP_008947143.1| - 3 8.2 10.1 0.49 10.7 5.9 1.9 2 0 0 2 2 2 0 Bacterial translation initiation factor IF-2 associated region adh_short_C2 PF13561.6 gi|568163748|ref|YP_008947144.1| - 1.8e-26 93.2 0.0 2.1e-26 92.9 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|568163748|ref|YP_008947144.1| - 1.1e-20 74.0 0.0 1.3e-20 73.7 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase HpaB_N PF11794.8 gi|568163749|ref|YP_008947145.1| - 8.1e-84 281.5 0.4 1.1e-83 281.0 0.4 1.2 1 0 0 1 1 1 1 4-hydroxyphenylacetate 3-hydroxylase N terminal HpaB PF03241.13 gi|568163749|ref|YP_008947145.1| - 1.2e-51 174.7 0.0 1.6e-51 174.3 0.0 1.2 1 0 0 1 1 1 1 4-hydroxyphenylacetate 3-hydroxylase C terminal Acyl-CoA_dh_M PF02770.19 gi|568163749|ref|YP_008947145.1| - 0.00048 20.3 0.0 0.001 19.2 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain adh_short_C2 PF13561.6 gi|568163750|ref|YP_008947146.1| - 5.9e-52 176.5 0.6 7.2e-52 176.3 0.6 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|568163750|ref|YP_008947146.1| - 5.2e-51 172.9 1.3 6.7e-51 172.5 1.3 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|568163750|ref|YP_008947146.1| - 4.2e-09 36.6 0.3 5.7e-09 36.1 0.3 1.1 1 0 0 1 1 1 1 KR domain 2-Hacid_dh_C PF02826.19 gi|568163750|ref|YP_008947146.1| - 0.074 12.4 0.4 0.13 11.6 0.4 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YjeF_N PF03853.15 gi|568163750|ref|YP_008947146.1| - 0.086 12.7 0.2 0.18 11.7 0.2 1.5 1 0 0 1 1 1 0 YjeF-related protein N-terminus Epimerase PF01370.21 gi|568163750|ref|YP_008947146.1| - 0.092 12.2 0.4 0.17 11.3 0.4 1.7 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family Wax2_C PF12076.8 gi|568163750|ref|YP_008947146.1| - 0.11 12.2 0.1 0.37 10.5 0.0 1.8 2 0 0 2 2 2 0 WAX2 C-terminal domain NAD_binding_7 PF13241.6 gi|568163750|ref|YP_008947146.1| - 0.21 12.1 1.0 0.32 11.5 0.6 1.6 2 1 0 2 2 2 0 Putative NAD(P)-binding Abhydrolase_3 PF07859.13 gi|568163751|ref|YP_008947147.1| - 6.8e-62 209.1 0.0 8.1e-62 208.8 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold COesterase PF00135.28 gi|568163751|ref|YP_008947147.1| - 3.8e-07 29.3 0.0 1.2e-06 27.7 0.0 1.7 1 1 0 1 1 1 1 Carboxylesterase family Peptidase_S9 PF00326.21 gi|568163751|ref|YP_008947147.1| - 0.0081 15.7 0.0 0.014 14.9 0.0 1.5 1 1 0 1 1 1 1 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 gi|568164833|ref|YP_008947148.1| - 7.6e-07 28.6 0.0 1.1e-06 28.1 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 gi|568164833|ref|YP_008947148.1| - 2.6e-05 24.9 0.0 3.5e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 gi|568164833|ref|YP_008947148.1| - 0.0052 16.5 0.0 0.011 15.4 0.0 1.5 1 1 1 2 2 2 1 alpha/beta hydrolase fold TetR_N PF00440.23 gi|568163752|ref|YP_008947149.1| - 4.3e-15 55.2 0.1 6.8e-15 54.6 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family Luteo_PO PF04662.13 gi|568163752|ref|YP_008947149.1| - 0.049 13.3 0.0 0.068 12.8 0.0 1.2 1 0 0 1 1 1 0 Luteovirus P0 protein Acyl-CoA_dh_N PF02771.16 gi|568163753|ref|YP_008947150.1| - 1.3e-23 83.8 0.1 2.4e-23 82.9 0.1 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|568163753|ref|YP_008947150.1| - 1.8e-20 72.9 0.0 4.2e-20 71.8 0.0 1.6 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_1 PF00441.24 gi|568163753|ref|YP_008947150.1| - 5.4e-16 59.1 0.4 2e-14 54.0 0.4 2.2 1 1 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_ox_N PF14749.6 gi|568163753|ref|YP_008947150.1| - 0.12 13.0 0.0 0.2 12.2 0.0 1.4 1 0 0 1 1 1 0 Acyl-coenzyme A oxidase N-terminal ECH_1 PF00378.20 gi|568163754|ref|YP_008947151.1| - 2.9e-68 229.9 0.0 4.3e-68 229.3 0.0 1.2 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase 3HCDH_N PF02737.18 gi|568163754|ref|YP_008947151.1| - 4.6e-65 218.9 0.3 8.6e-65 218.0 0.3 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 gi|568163754|ref|YP_008947151.1| - 2.3e-43 146.7 0.2 2e-23 82.8 0.0 3.1 4 0 0 4 4 4 2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ECH_2 PF16113.5 gi|568163754|ref|YP_008947151.1| - 2.9e-40 138.8 0.2 4.8e-37 128.2 0.0 2.4 2 1 1 3 3 3 2 Enoyl-CoA hydratase/isomerase NAD_binding_2 PF03446.15 gi|568163754|ref|YP_008947151.1| - 0.00048 20.3 0.0 0.0013 18.9 0.0 1.8 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase SeleniumBinding PF11524.8 gi|568163754|ref|YP_008947151.1| - 0.0011 19.4 0.1 0.0078 16.6 0.0 2.4 2 0 0 2 2 2 1 Selenium binding protein F420_oxidored PF03807.17 gi|568163754|ref|YP_008947151.1| - 0.0052 17.3 0.1 0.031 14.9 0.1 2.4 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent Pyr_redox_2 PF07992.14 gi|568163754|ref|YP_008947151.1| - 0.0062 15.8 0.1 0.012 14.9 0.1 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|568163754|ref|YP_008947151.1| - 0.0089 15.3 0.2 0.016 14.5 0.2 1.5 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain adh_short_C2 PF13561.6 gi|568163754|ref|YP_008947151.1| - 0.018 14.6 0.1 0.033 13.8 0.1 1.4 1 0 0 1 1 1 0 Enoyl-(Acyl carrier protein) reductase 2-Hacid_dh_C PF02826.19 gi|568163754|ref|YP_008947151.1| - 0.071 12.5 0.1 0.16 11.3 0.1 1.5 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Pyr_redox PF00070.27 gi|568163754|ref|YP_008947151.1| - 0.1 13.1 0.1 0.46 11.1 0.1 2.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Lactamase_B PF00753.27 gi|568163755|ref|YP_008947152.1| - 2e-25 90.0 1.4 1.5e-24 87.1 1.4 2.0 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.6 gi|568163755|ref|YP_008947152.1| - 0.0064 16.4 0.0 0.012 15.5 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|568163755|ref|YP_008947152.1| - 0.013 15.1 0.0 0.022 14.3 0.0 1.4 1 0 0 1 1 1 0 Beta-lactamase superfamily domain AMP-binding PF00501.28 gi|568163756|ref|YP_008947153.1| - 3e-73 246.8 0.0 3.7e-73 246.5 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|568163756|ref|YP_008947153.1| - 9.5e-22 77.8 0.1 3.1e-21 76.1 0.1 2.0 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Ribonuc_red_sm PF00268.21 gi|568163757|ref|YP_008947154.1| - 3.5e-18 66.1 0.0 4.5e-18 65.7 0.0 1.2 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain Rubrerythrin PF02915.17 gi|568163757|ref|YP_008947154.1| - 6.2e-06 26.6 0.4 0.044 14.2 0.0 2.3 2 0 0 2 2 2 2 Rubrerythrin DUF455 PF04305.14 gi|568163757|ref|YP_008947154.1| - 0.00051 19.7 0.0 0.46 10.0 0.0 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF455) Ald_deCOase PF11266.8 gi|568163757|ref|YP_008947154.1| - 0.024 14.3 0.1 0.039 13.6 0.1 1.3 1 0 0 1 1 1 0 Long-chain fatty aldehyde decarbonylase FA_desaturase_2 PF03405.14 gi|568163757|ref|YP_008947154.1| - 0.028 13.3 0.1 0.066 12.1 0.0 1.6 2 0 0 2 2 2 0 Fatty acid desaturase Acyl-CoA_dh_1 PF00441.24 gi|568163758|ref|YP_008947155.1| - 1.7e-11 44.5 0.0 3.5e-11 43.5 0.0 1.5 1 1 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Thiolase_N PF00108.23 gi|568163759|ref|YP_008947156.1| - 1.8e-66 224.1 0.0 2.5e-66 223.7 0.0 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|568163759|ref|YP_008947156.1| - 2.7e-45 153.0 0.6 7.2e-45 151.6 0.4 1.8 2 0 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|568163759|ref|YP_008947156.1| - 1.2e-06 28.3 0.1 1.4e-05 24.8 0.0 2.7 2 1 1 3 3 3 1 Beta-ketoacyl synthase, N-terminal domain SpoVAD PF07451.11 gi|568163759|ref|YP_008947156.1| - 0.017 13.9 0.0 0.031 13.0 0.0 1.4 1 0 0 1 1 1 0 Stage V sporulation protein AD (SpoVAD) ADH_N PF08240.12 gi|568163760|ref|YP_008947157.1| - 1.7e-24 85.8 0.0 1.7e-23 82.6 0.0 2.3 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|568163760|ref|YP_008947157.1| - 2.3e-20 72.9 0.7 3.8e-20 72.2 0.7 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|568163760|ref|YP_008947157.1| - 4.2e-10 40.8 0.2 8.7e-10 39.8 0.0 1.6 2 0 0 2 2 1 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 gi|568163760|ref|YP_008947157.1| - 0.0093 15.3 2.1 0.015 14.6 2.1 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain SIS_2 PF13580.6 gi|568163760|ref|YP_008947157.1| - 0.01 15.8 0.1 0.018 15.1 0.1 1.4 1 0 0 1 1 1 0 SIS domain LDcluster4 PF18306.1 gi|568163760|ref|YP_008947157.1| - 0.011 15.4 1.0 0.017 14.7 1.0 1.3 1 0 0 1 1 1 0 SLOG cluster4 family Epimerase PF01370.21 gi|568163760|ref|YP_008947157.1| - 0.077 12.4 0.3 0.11 11.9 0.3 1.2 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family ACP_syn_III_C PF08541.10 gi|568163760|ref|YP_008947157.1| - 0.089 13.0 0.1 0.17 12.1 0.1 1.5 1 0 0 1 1 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal adh_short PF00106.25 gi|568163760|ref|YP_008947157.1| - 0.11 11.9 2.8 0.23 10.9 2.7 1.7 1 1 0 1 1 1 0 short chain dehydrogenase CMAS PF02353.20 gi|568163760|ref|YP_008947157.1| - 0.11 11.7 0.2 0.17 11.1 0.2 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase E1-N PF14463.6 gi|568163760|ref|YP_008947157.1| - 0.18 11.6 0.6 0.51 10.1 0.6 1.8 1 1 1 2 2 2 0 E1 N-terminal domain Abhydrolase_3 PF07859.13 gi|568163761|ref|YP_008947158.1| - 5.6e-67 225.7 0.0 6.9e-67 225.4 0.0 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold COesterase PF00135.28 gi|568163761|ref|YP_008947158.1| - 1e-07 31.2 0.2 3.9e-07 29.3 0.2 1.6 1 1 0 1 1 1 1 Carboxylesterase family Chlorophyllase2 PF12740.7 gi|568163761|ref|YP_008947158.1| - 1.2e-05 24.3 0.0 1.8e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 Chlorophyllase enzyme Say1_Mug180 PF10340.9 gi|568163761|ref|YP_008947158.1| - 3.6e-05 22.8 0.0 4.9e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 Steryl acetyl hydrolase Chlorophyllase PF07224.11 gi|568163761|ref|YP_008947158.1| - 0.0031 16.6 0.0 0.0044 16.1 0.0 1.2 1 0 0 1 1 1 1 Chlorophyllase FGGY_N PF00370.21 gi|568163762|ref|YP_008947159.1| - 4.7e-80 268.7 0.2 8.5e-80 267.8 0.0 1.5 2 0 0 2 2 2 1 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.16 gi|568163762|ref|YP_008947159.1| - 5.3e-56 189.5 0.0 1.5e-55 188.0 0.0 1.7 2 0 0 2 2 2 1 FGGY family of carbohydrate kinases, C-terminal domain BcrAD_BadFG PF01869.20 gi|568163762|ref|YP_008947159.1| - 0.00059 19.4 0.8 0.2 11.1 0.0 2.3 2 0 0 2 2 2 2 BadF/BadG/BcrA/BcrD ATPase family Peptidase_M22 PF00814.25 gi|568163762|ref|YP_008947159.1| - 0.033 13.9 0.0 8.3 6.0 0.0 2.3 2 0 0 2 2 2 0 Glycoprotease family DAO PF01266.24 gi|568163763|ref|YP_008947160.1| - 2.7e-51 175.2 0.0 3.2e-51 175.0 0.0 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|568163763|ref|YP_008947160.1| - 1.9e-07 30.6 1.9 3e-06 26.6 1.9 2.1 1 1 0 1 1 1 1 FAD binding domain FAD_binding_3 PF01494.19 gi|568163763|ref|YP_008947160.1| - 1.2e-05 24.7 0.2 8.8e-05 21.9 0.4 1.9 2 0 0 2 2 2 1 FAD binding domain NAD_binding_8 PF13450.6 gi|568163763|ref|YP_008947160.1| - 3.2e-05 24.1 1.2 7.9e-05 22.8 0.5 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 gi|568163763|ref|YP_008947160.1| - 9.7e-05 21.2 1.0 0.00012 20.9 0.2 1.6 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox_2 PF07992.14 gi|568163763|ref|YP_008947160.1| - 9.7e-05 21.7 0.3 0.00019 20.8 0.2 1.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|568163763|ref|YP_008947160.1| - 0.00059 20.3 1.6 0.0085 16.6 0.5 2.7 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|568163763|ref|YP_008947160.1| - 0.0039 16.6 1.6 0.024 14.0 1.6 2.0 1 1 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 gi|568163763|ref|YP_008947160.1| - 0.013 14.7 0.2 0.028 13.7 0.2 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.16 gi|568163763|ref|YP_008947160.1| - 0.019 14.6 0.1 0.037 13.7 0.1 1.5 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA NAD_binding_7 PF13241.6 gi|568163763|ref|YP_008947160.1| - 0.022 15.2 0.1 0.68 10.4 0.1 2.6 1 1 0 1 1 1 0 Putative NAD(P)-binding GMC_oxred_N PF00732.19 gi|568163763|ref|YP_008947160.1| - 0.043 13.2 0.3 0.49 9.7 0.1 2.2 2 0 0 2 2 2 0 GMC oxidoreductase GIDA PF01134.22 gi|568163763|ref|YP_008947160.1| - 0.045 12.8 1.8 0.15 11.2 0.6 2.0 2 0 0 2 2 2 0 Glucose inhibited division protein A Lycopene_cycl PF05834.12 gi|568163763|ref|YP_008947160.1| - 0.069 12.2 0.2 0.1 11.6 0.2 1.2 1 0 0 1 1 1 0 Lycopene cyclase protein Trp_halogenase PF04820.14 gi|568163763|ref|YP_008947160.1| - 0.33 9.7 0.5 0.56 9.0 0.5 1.3 1 0 0 1 1 1 0 Tryptophan halogenase COXG PF06240.13 gi|568163764|ref|YP_008947161.1| - 9.6e-34 116.1 0.2 1.1e-33 116.0 0.2 1.0 1 0 0 1 1 1 1 Carbon monoxide dehydrogenase subunit G (CoxG) DUF35_N PF12172.8 gi|568163765|ref|YP_008947162.1| - 4.9e-13 48.7 0.1 9.1e-13 47.8 0.1 1.4 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) OB_aCoA_assoc PF01796.17 gi|568163765|ref|YP_008947162.1| - 2.8e-12 46.4 0.1 4.3e-12 45.8 0.1 1.3 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated Auto_anti-p27 PF06677.12 gi|568163765|ref|YP_008947162.1| - 0.036 14.2 2.1 0.076 13.2 2.2 1.5 1 1 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) HypA PF01155.19 gi|568163765|ref|YP_008947162.1| - 0.046 13.7 0.0 0.073 13.1 0.0 1.4 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CxC5 PF18718.1 gi|568163765|ref|YP_008947162.1| - 0.069 13.2 0.4 0.56 10.3 0.1 2.1 1 1 1 2 2 2 0 CxC5 like cysteine cluster associated with KDZ transposases Hepsin-SRCR PF09272.10 gi|568163765|ref|YP_008947162.1| - 0.078 13.5 0.0 0.11 13.0 0.0 1.4 1 0 0 1 1 1 0 Hepsin, SRCR domain Thiolase_N PF00108.23 gi|568163766|ref|YP_008947163.1| - 3.3e-30 105.3 0.0 5.7e-30 104.5 0.0 1.4 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|568163766|ref|YP_008947163.1| - 4.2e-08 32.9 0.1 3.9e-06 26.5 0.1 2.6 2 0 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|568163766|ref|YP_008947163.1| - 1.6e-07 31.1 7.1 4.8e-07 29.6 1.0 2.8 2 1 1 3 3 3 1 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III PF08545.10 gi|568163766|ref|YP_008947163.1| - 9.1e-06 25.4 0.2 0.00034 20.4 0.1 2.4 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DUF2048 PF09752.9 gi|568163766|ref|YP_008947163.1| - 0.026 13.6 0.0 0.054 12.6 0.0 1.4 1 0 0 1 1 1 0 Abhydrolase domain containing 18 FAE1_CUT1_RppA PF08392.12 gi|568163766|ref|YP_008947163.1| - 0.035 13.4 0.0 0.064 12.5 0.0 1.3 1 0 0 1 1 1 0 FAE1/Type III polyketide synthase-like protein SpoVAD PF07451.11 gi|568163766|ref|YP_008947163.1| - 0.089 11.5 0.0 0.16 10.6 0.0 1.4 1 0 0 1 1 1 0 Stage V sporulation protein AD (SpoVAD) AMP-binding PF00501.28 gi|568163767|ref|YP_008947164.1| - 1.3e-90 304.0 0.0 1.6e-90 303.8 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|568163767|ref|YP_008947164.1| - 1.6e-17 64.3 0.0 2.6e-17 63.5 0.0 1.4 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Acyl-CoA_dh_1 PF00441.24 gi|568163768|ref|YP_008947165.1| - 2.9e-43 147.6 4.1 5.2e-43 146.8 4.1 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|568163768|ref|YP_008947165.1| - 3.1e-33 114.8 2.1 4.1e-33 114.4 0.3 2.1 2 1 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|568163768|ref|YP_008947165.1| - 4.6e-27 94.1 0.0 9.3e-27 93.1 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|568163768|ref|YP_008947165.1| - 1.6e-19 70.5 2.6 3.3e-19 69.5 2.6 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain CBM39 PF15886.5 gi|568163768|ref|YP_008947165.1| - 0.033 14.1 0.0 0.065 13.1 0.0 1.4 1 0 0 1 1 1 0 Carbohydrate binding domain (family 32) CcdA PF07362.12 gi|568164834|ref|YP_008947166.1| - 0.0055 17.1 0.2 0.0063 16.9 0.2 1.1 1 0 0 1 1 1 1 Post-segregation antitoxin CcdA BrnA_antitoxin PF14384.6 gi|568164834|ref|YP_008947166.1| - 0.13 12.8 0.2 0.13 12.7 0.2 1.2 1 0 0 1 1 1 0 BrnA antitoxin of type II toxin-antitoxin system AhpC-TSA PF00578.21 gi|568163769|ref|YP_008947168.1| - 1.6e-36 124.9 0.0 1.9e-36 124.7 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|568163769|ref|YP_008947168.1| - 1.7e-25 89.5 0.0 2e-25 89.2 0.0 1.0 1 0 0 1 1 1 1 Redoxin AhpC-TSA_2 PF13911.6 gi|568163769|ref|YP_008947168.1| - 0.05 13.7 0.0 2.4 8.3 0.0 2.3 1 1 1 2 2 2 0 AhpC/TSA antioxidant enzyme SCO1-SenC PF02630.14 gi|568163769|ref|YP_008947168.1| - 0.15 11.9 0.0 0.31 10.9 0.0 1.4 2 0 0 2 2 2 0 SCO1/SenC AMP-binding PF00501.28 gi|568163770|ref|YP_008947169.1| - 4.3e-68 229.9 0.0 5.2e-68 229.6 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|568163770|ref|YP_008947169.1| - 2.5e-22 79.6 0.0 5.3e-22 78.6 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain SspH PF08141.12 gi|568164836|ref|YP_008947170.1| - 0.013 15.6 0.3 0.033 14.3 0.0 1.8 2 0 0 2 2 2 0 Small acid-soluble spore protein H family Phosphoesterase PF04185.14 gi|568163771|ref|YP_008947172.1| - 3.1e-71 240.4 5.1 6.5e-71 239.4 5.1 1.5 1 1 0 1 1 1 1 Phosphoesterase family DUF2569 PF10754.9 gi|568163771|ref|YP_008947172.1| - 8.1 6.9 11.8 0.57 10.6 6.4 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2569) Metallophos PF00149.28 gi|568163772|ref|YP_008947173.1| - 2.2e-10 41.4 0.3 4.9e-10 40.2 0.3 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|568163772|ref|YP_008947173.1| - 6.2e-10 39.5 0.0 1.1e-09 38.7 0.0 1.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos_3 PF14582.6 gi|568163772|ref|YP_008947173.1| - 1.5e-05 24.5 0.2 6.2e-05 22.4 0.1 1.8 1 1 1 2 2 2 1 Metallophosphoesterase, calcineurin superfamily ATPase_2 PF01637.18 gi|568163773|ref|YP_008947174.1| - 1.7e-17 64.1 0.0 2.9e-17 63.4 0.0 1.4 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_14 PF13173.6 gi|568163773|ref|YP_008947174.1| - 5.4e-08 32.9 0.3 2.7e-06 27.5 0.0 2.8 2 1 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|568163773|ref|YP_008947174.1| - 6.8e-07 29.6 0.1 1.9e-06 28.2 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|568163773|ref|YP_008947174.1| - 1.7e-05 25.3 0.1 6.4e-05 23.4 0.1 1.9 1 1 0 1 1 1 1 AAA ATPase domain AAA_19 PF13245.6 gi|568163773|ref|YP_008947174.1| - 0.0095 16.3 0.0 0.034 14.5 0.0 1.8 1 1 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 gi|568163773|ref|YP_008947174.1| - 0.014 15.3 0.1 0.026 14.4 0.1 1.5 1 1 0 1 1 1 0 NTPase T2SSE PF00437.20 gi|568163773|ref|YP_008947174.1| - 0.029 13.4 0.0 0.051 12.6 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein DUF4423 PF14394.6 gi|568163773|ref|YP_008947174.1| - 0.032 14.0 0.0 0.056 13.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) DUF815 PF05673.13 gi|568163773|ref|YP_008947174.1| - 0.046 12.9 0.1 0.089 11.9 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA PF00004.29 gi|568163773|ref|YP_008947174.1| - 0.062 13.7 0.0 0.2 12.0 0.0 2.0 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 gi|568163773|ref|YP_008947174.1| - 0.066 12.7 0.0 0.12 11.9 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region Zeta_toxin PF06414.12 gi|568163773|ref|YP_008947174.1| - 0.17 11.2 0.0 0.28 10.4 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin ECH_1 PF00378.20 gi|568163774|ref|YP_008947175.1| - 2.7e-65 220.1 0.0 3.1e-65 220.0 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|568163774|ref|YP_008947175.1| - 1.4e-41 143.1 0.0 8e-40 137.3 0.0 1.8 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase ATP-synt_F PF01990.17 gi|568163774|ref|YP_008947175.1| - 0.049 14.0 0.8 0.12 12.7 0.0 2.1 3 0 0 3 3 3 0 ATP synthase (F/14-kDa) subunit AMP-binding PF00501.28 gi|568164838|ref|YP_008947176.1| - 2.9e-82 276.5 0.0 3.8e-82 276.2 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|568164838|ref|YP_008947176.1| - 4.1e-19 69.3 0.0 9.3e-19 68.2 0.0 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain DUF2577 PF10844.8 gi|568164838|ref|YP_008947176.1| - 0.15 12.3 0.0 0.5 10.6 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2577) ECH_1 PF00378.20 gi|568163775|ref|YP_008947177.1| - 5.1e-69 232.4 0.0 7.5e-69 231.8 0.0 1.3 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase 3HCDH_N PF02737.18 gi|568163775|ref|YP_008947177.1| - 4.7e-62 209.1 0.2 9.7e-62 208.0 0.2 1.6 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 gi|568163775|ref|YP_008947177.1| - 9e-45 151.2 0.1 2.9e-23 82.3 0.0 2.7 2 0 0 2 2 2 2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ECH_2 PF16113.5 gi|568163775|ref|YP_008947177.1| - 1.1e-41 143.5 0.1 4e-37 128.5 0.0 2.3 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase NAD_binding_2 PF03446.15 gi|568163775|ref|YP_008947177.1| - 0.0054 16.9 0.0 0.013 15.7 0.0 1.7 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Pyr_redox_2 PF07992.14 gi|568163775|ref|YP_008947177.1| - 0.0056 15.9 0.0 0.0095 15.2 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_Gly3P_dh_N PF01210.23 gi|568163775|ref|YP_008947177.1| - 0.0097 15.9 0.1 0.054 13.5 0.0 2.3 2 1 1 3 3 3 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_7 PF13241.6 gi|568163775|ref|YP_008947177.1| - 0.014 15.8 0.1 0.16 12.4 0.0 2.3 2 0 0 2 2 2 0 Putative NAD(P)-binding F420_oxidored PF03807.17 gi|568163775|ref|YP_008947177.1| - 0.044 14.4 0.1 0.27 11.8 0.0 2.4 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent Pyr_redox PF00070.27 gi|568163775|ref|YP_008947177.1| - 0.094 13.3 0.1 0.45 11.1 0.0 2.2 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase ThiF PF00899.21 gi|568163775|ref|YP_008947177.1| - 0.19 11.1 0.0 0.34 10.2 0.0 1.4 1 0 0 1 1 1 0 ThiF family Shikimate_DH PF01488.20 gi|568163775|ref|YP_008947177.1| - 0.24 11.5 1.5 1.2 9.2 0.1 2.6 3 0 0 3 3 3 0 Shikimate / quinate 5-dehydrogenase Sugar_tr PF00083.24 gi|568163776|ref|YP_008947178.1| - 9.4e-41 140.1 26.5 1.1e-40 139.8 26.5 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|568163776|ref|YP_008947178.1| - 1.9e-26 92.8 51.1 9.1e-23 80.7 29.2 2.3 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 gi|568163776|ref|YP_008947178.1| - 3.1e-05 23.5 10.2 3.1e-05 23.5 10.2 2.3 2 0 0 2 2 2 1 Uncharacterised MFS-type transporter YbfB TPP_enzyme_N PF02776.18 gi|568163777|ref|YP_008947179.1| - 1.2e-44 151.9 0.0 2.7e-44 150.8 0.0 1.6 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|568163777|ref|YP_008947179.1| - 6.3e-37 126.4 0.0 1.7e-36 125.0 0.0 1.7 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain TPP_enzyme_C PF02775.21 gi|568163777|ref|YP_008947179.1| - 8.2e-27 93.9 0.0 3.7e-25 88.5 0.0 3.1 3 1 1 4 4 4 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Molybdopterin PF00384.22 gi|568163777|ref|YP_008947179.1| - 0.016 14.2 0.0 0.018 14.0 0.0 1.2 1 0 0 1 1 1 0 Molybdopterin oxidoreductase CENP-B_N PF04218.13 gi|568163777|ref|YP_008947179.1| - 0.039 13.6 0.7 0.09 12.4 0.7 1.6 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain VKOR PF07884.14 gi|568163778|ref|YP_008947180.1| - 4.9e-26 91.4 16.7 5.5e-26 91.2 16.7 1.0 1 0 0 1 1 1 1 Vitamin K epoxide reductase family DUF4229 PF14012.6 gi|568163778|ref|YP_008947180.1| - 3.7 7.7 7.2 0.66 10.1 0.6 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF4229) RIFIN PF02009.16 gi|568164840|ref|YP_008947182.1| - 0.0007 19.6 8.9 0.0007 19.6 8.9 1.9 2 0 0 2 2 2 1 Rifin SOG2 PF10428.9 gi|568164840|ref|YP_008947182.1| - 0.0086 15.3 26.6 0.011 14.9 26.6 1.1 1 0 0 1 1 1 1 RAM signalling pathway protein Amnionless PF14828.6 gi|568164840|ref|YP_008947182.1| - 0.22 10.3 3.4 0.33 9.7 3.4 1.3 1 0 0 1 1 1 0 Amnionless Stevor PF17410.2 gi|568164840|ref|YP_008947182.1| - 0.6 9.6 13.1 0.032 13.8 7.6 1.8 2 0 0 2 2 2 0 Subtelomeric Variable Open Reading frame Tim54 PF11711.8 gi|568164840|ref|YP_008947182.1| - 4.4 6.0 4.2 7 5.3 4.2 1.2 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 Radical_SAM PF04055.21 gi|568163779|ref|YP_008947183.1| - 3.5e-11 43.8 0.0 4.7e-11 43.4 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|568163779|ref|YP_008947183.1| - 0.011 15.8 0.0 0.023 14.8 0.0 1.6 1 0 0 1 1 1 0 4Fe-4S single cluster domain DUF1848 PF08902.11 gi|568163779|ref|YP_008947183.1| - 0.046 13.4 4.0 11 5.6 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1848) Nre_N PF04894.12 gi|568163780|ref|YP_008947184.1| - 2.3e-96 322.8 0.1 3e-96 322.4 0.1 1.1 1 0 0 1 1 1 1 Archaeal Nre, N-terminal Nre_C PF04895.12 gi|568163780|ref|YP_008947184.1| - 1.2e-36 125.0 0.1 2.9e-36 123.7 0.0 1.6 2 0 0 2 2 2 1 Archaeal Nre, C-terminal LigB PF02900.18 gi|568164841|ref|YP_008947185.1| - 2.8e-35 121.7 0.0 3.4e-35 121.4 0.0 1.0 1 0 0 1 1 1 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase TORC_C PF12886.7 gi|568163781|ref|YP_008947186.1| - 0.058 13.9 0.0 0.062 13.9 0.0 1.2 1 0 0 1 1 1 0 Transducer of regulated CREB activity, C terminus Ring_hydroxyl_B PF00866.18 gi|568163782|ref|YP_008947187.1| - 2.2e-29 102.4 2.3 2.6e-29 102.2 2.3 1.1 1 0 0 1 1 1 1 Ring hydroxylating beta subunit Ring_hydroxyl_A PF00848.19 gi|568164842|ref|YP_008947188.1| - 1.5e-24 87.2 0.0 2.1e-24 86.7 0.0 1.2 1 0 0 1 1 1 1 Ring hydroxylating alpha subunit (catalytic domain) Rieske PF00355.26 gi|568164842|ref|YP_008947188.1| - 3.6e-19 68.5 0.0 6e-19 67.8 0.0 1.3 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain RL11D PF11088.8 gi|568164842|ref|YP_008947188.1| - 0.18 12.1 0.0 0.66 10.3 0.0 1.9 2 0 0 2 2 2 0 Glycoprotein encoding membrane proteins RL5A and RL6 AMP-binding PF00501.28 gi|568163783|ref|YP_008947189.1| - 3.8e-99 332.2 0.0 4.8e-99 331.8 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|568163783|ref|YP_008947189.1| - 3.2e-25 88.9 0.6 6.6e-25 87.9 0.6 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain LigA PF07746.11 gi|568164843|ref|YP_008947190.1| - 1.1e-06 28.7 0.0 1.4e-06 28.4 0.0 1.1 1 0 0 1 1 1 1 Aromatic-ring-opening dioxygenase LigAB, LigA subunit Sugar_tr PF00083.24 gi|568164844|ref|YP_008947191.1| - 6.1e-27 94.6 39.4 2.8e-17 62.7 17.0 2.0 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.16 gi|568164844|ref|YP_008947191.1| - 5.7e-16 58.4 68.0 6.6e-08 31.9 34.8 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF2463 PF09591.10 gi|568164844|ref|YP_008947191.1| - 0.038 13.9 1.5 0.038 13.9 1.5 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2463) SHP PF03579.13 gi|568164844|ref|YP_008947191.1| - 0.27 11.2 5.1 0.08 12.9 0.9 2.4 2 0 0 2 2 2 0 Small hydrophobic protein Rieske PF00355.26 gi|568163784|ref|YP_008947192.1| - 5.9e-15 55.0 0.0 1.1e-14 54.1 0.0 1.4 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Ring_hydroxyl_A PF00848.19 gi|568163784|ref|YP_008947192.1| - 3.5e-12 46.8 0.0 2.6e-11 43.9 0.0 2.1 1 1 0 1 1 1 1 Ring hydroxylating alpha subunit (catalytic domain) Ring_hydroxyl_B PF00866.18 gi|568163785|ref|YP_008947193.1| - 5.8e-32 110.7 0.5 7.2e-32 110.4 0.5 1.0 1 0 0 1 1 1 1 Ring hydroxylating beta subunit SnoaL_4 PF13577.6 gi|568163785|ref|YP_008947193.1| - 5.7e-06 26.5 0.0 9e-06 25.8 0.0 1.3 1 1 0 1 1 1 1 SnoaL-like domain SPESP1 PF15754.5 gi|568163786|ref|YP_008947194.1| - 0.14 11.3 0.0 0.17 11.1 0.0 1.1 1 0 0 1 1 1 0 Sperm equatorial segment protein 1 Sugar_tr PF00083.24 gi|568164845|ref|YP_008947195.1| - 9.3e-14 51.1 5.6 1.1e-13 50.8 5.6 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|568164845|ref|YP_008947195.1| - 8.2e-08 31.5 15.3 2e-07 30.3 14.6 1.7 1 1 1 2 2 2 1 Major Facilitator Superfamily TAT_signal PF10518.9 gi|568164845|ref|YP_008947195.1| - 0.21 11.5 0.1 0.21 11.5 0.1 3.9 5 0 0 5 5 5 0 TAT (twin-arginine translocation) pathway signal sequence MFS_1 PF07690.16 gi|568164846|ref|YP_008947196.1| - 1.2e-05 24.5 32.2 5.1e-05 22.4 32.1 1.8 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|568164846|ref|YP_008947196.1| - 0.00054 19.0 11.6 0.00064 18.7 11.6 1.2 1 0 0 1 1 1 1 Sugar (and other) transporter Bac_export_2 PF01312.19 gi|568164846|ref|YP_008947196.1| - 4.6 6.3 6.0 2.5 7.2 0.7 2.0 2 0 0 2 2 2 0 FlhB HrpN YscU SpaS Family Thiolase_C PF02803.18 gi|568163787|ref|YP_008947197.1| - 0.00069 19.3 1.1 0.0035 17.0 0.0 2.3 3 0 0 3 3 3 1 Thiolase, C-terminal domain DUF35_N PF12172.8 gi|568163788|ref|YP_008947198.1| - 2e-07 30.7 0.5 2.8e-07 30.3 0.5 1.2 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) OB_aCoA_assoc PF01796.17 gi|568163788|ref|YP_008947198.1| - 0.00054 19.9 0.1 0.001 19.0 0.0 1.5 2 0 0 2 2 2 1 DUF35 OB-fold domain, acyl-CoA-associated TackOD1 PF18551.1 gi|568163788|ref|YP_008947198.1| - 0.013 15.1 0.5 0.018 14.8 0.5 1.1 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 FdhE PF04216.12 gi|568163788|ref|YP_008947198.1| - 0.018 15.0 0.7 0.023 14.6 0.7 1.1 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation HypA PF01155.19 gi|568163788|ref|YP_008947198.1| - 0.037 14.0 0.1 0.057 13.4 0.1 1.3 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Bac_luciferase PF00296.20 gi|568164847|ref|YP_008947199.1| - 1e-30 107.3 0.0 1.4e-30 106.8 0.0 1.1 1 0 0 1 1 1 1 Luciferase-like monooxygenase PIN PF01850.21 gi|568164848|ref|YP_008947200.1| - 0.0029 18.1 0.1 0.003 18.0 0.1 1.0 1 0 0 1 1 1 1 PIN domain E1_dh PF00676.20 gi|568163789|ref|YP_008947202.1| - 7.3e-70 235.3 0.0 2.8e-69 233.4 0.0 1.7 1 1 0 1 1 1 1 Dehydrogenase E1 component TPP_enzyme_C PF02775.21 gi|568163789|ref|YP_008947202.1| - 7.8e-11 42.0 0.6 3.1e-10 40.1 0.3 2.1 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DXP_synthase_N PF13292.6 gi|568163789|ref|YP_008947202.1| - 2.7e-07 30.1 0.0 7.9e-07 28.5 0.0 1.7 1 1 0 1 1 1 1 1-deoxy-D-xylulose-5-phosphate synthase Transketolase_C PF02780.20 gi|568163790|ref|YP_008947203.1| - 3.4e-38 130.3 0.1 5.4e-38 129.7 0.1 1.3 1 0 0 1 1 1 1 Transketolase, C-terminal domain Transket_pyr PF02779.24 gi|568163790|ref|YP_008947203.1| - 1.6e-22 80.1 0.0 3.1e-22 79.1 0.0 1.5 2 0 0 2 2 2 1 Transketolase, pyrimidine binding domain PFOR_II PF17147.4 gi|568163790|ref|YP_008947203.1| - 4.6e-05 23.7 0.0 9.8e-05 22.6 0.0 1.6 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Rpp20 PF12328.8 gi|568163790|ref|YP_008947203.1| - 0.049 13.6 0.0 0.093 12.7 0.0 1.4 1 0 0 1 1 1 0 Rpp20 subunit of nuclear RNase MRP and P FCD PF07729.12 gi|568163791|ref|YP_008947204.1| - 1.5e-30 106.2 1.9 1.9e-30 105.9 1.9 1.1 1 0 0 1 1 1 1 FCD domain GntR PF00392.21 gi|568163791|ref|YP_008947204.1| - 3.1e-11 42.8 1.5 9.4e-11 41.2 0.0 2.6 3 1 0 3 3 2 1 Bacterial regulatory proteins, gntR family HTH_11 PF08279.12 gi|568163791|ref|YP_008947204.1| - 0.00012 21.9 0.0 0.00049 20.0 0.0 2.1 1 0 0 1 1 1 1 HTH domain HTH_24 PF13412.6 gi|568163791|ref|YP_008947204.1| - 0.00039 19.9 0.4 0.0013 18.2 0.0 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 gi|568163791|ref|YP_008947204.1| - 0.0025 17.8 0.2 0.013 15.4 0.2 2.3 2 1 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_20 PF12840.7 gi|568163791|ref|YP_008947204.1| - 0.003 17.6 0.0 0.017 15.1 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|568163791|ref|YP_008947204.1| - 0.0033 17.2 0.0 0.011 15.6 0.0 1.9 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family PaaX PF07848.12 gi|568163791|ref|YP_008947204.1| - 0.0088 16.2 0.0 0.018 15.3 0.0 1.5 1 0 0 1 1 1 1 PaaX-like protein HTH_41 PF14502.6 gi|568163791|ref|YP_008947204.1| - 0.01 15.5 0.0 0.024 14.3 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain DUF2525 PF10733.9 gi|568163791|ref|YP_008947204.1| - 0.016 15.5 1.2 0.026 14.8 0.3 1.8 2 0 0 2 2 1 0 Protein of unknown function (DUF2525) HTH_8 PF02954.19 gi|568163791|ref|YP_008947204.1| - 0.016 15.0 0.1 0.18 11.6 0.0 2.3 2 0 0 2 2 2 0 Bacterial regulatory protein, Fis family HTH_DeoR PF08220.12 gi|568163791|ref|YP_008947204.1| - 0.016 14.9 0.2 0.12 12.1 0.0 2.4 2 0 0 2 2 2 0 DeoR-like helix-turn-helix domain EAP30 PF04157.16 gi|568163791|ref|YP_008947204.1| - 0.019 14.3 0.0 2.1 7.6 0.0 2.2 2 0 0 2 2 2 0 EAP30/Vps36 family TrmB PF01978.19 gi|568163791|ref|YP_008947204.1| - 0.022 14.6 0.1 0.079 12.8 0.1 1.9 2 0 0 2 2 1 0 Sugar-specific transcriptional regulator TrmB DUF4941 PF16299.5 gi|568163791|ref|YP_008947204.1| - 0.027 13.8 0.1 0.066 12.5 0.1 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4941) HTH_36 PF13730.6 gi|568163791|ref|YP_008947204.1| - 0.03 14.3 0.0 0.08 12.9 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain Phage_rep_O PF04492.13 gi|568163791|ref|YP_008947204.1| - 0.035 14.7 0.3 2 9.0 0.0 2.5 2 1 0 2 2 2 0 Bacteriophage replication protein O NUMOD1 PF07453.13 gi|568163791|ref|YP_008947204.1| - 0.039 14.2 0.1 0.34 11.2 0.0 2.5 2 1 0 2 2 2 0 NUMOD1 domain Fe_dep_repress PF01325.19 gi|568163791|ref|YP_008947204.1| - 0.04 14.1 0.0 0.34 11.2 0.0 2.6 3 0 0 3 3 2 0 Iron dependent repressor, N-terminal DNA binding domain IreB PF06135.12 gi|568163791|ref|YP_008947204.1| - 0.07 13.3 2.2 0.16 12.2 1.0 2.3 2 1 0 2 2 2 0 IreB regulatory phosphoprotein Rrf2 PF02082.20 gi|568163791|ref|YP_008947204.1| - 0.071 13.5 0.0 0.22 11.9 0.0 1.8 1 0 0 1 1 1 0 Transcriptional regulator RPA_C PF08784.11 gi|568163791|ref|YP_008947204.1| - 0.14 12.9 0.0 0.45 11.2 0.0 1.8 2 0 0 2 2 1 0 Replication protein A C terminal Bromodomain PF00439.25 gi|568163791|ref|YP_008947204.1| - 0.37 10.9 2.8 1.9 8.6 0.3 2.6 1 1 1 2 2 2 0 Bromodomain FapA PF03961.13 gi|568163791|ref|YP_008947204.1| - 0.82 8.2 5.0 0.76 8.3 4.2 1.3 1 1 0 1 1 1 0 Flagellar Assembly Protein A 2-Hacid_dh_C PF02826.19 gi|568163792|ref|YP_008947205.1| - 6.1e-66 221.2 0.0 8.8e-66 220.6 0.0 1.2 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|568163792|ref|YP_008947205.1| - 1.4e-21 76.5 0.0 1.7e-21 76.3 0.0 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 gi|568163792|ref|YP_008947205.1| - 2e-08 34.6 0.3 6.6e-07 29.6 0.0 2.1 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase AlaDh_PNT_C PF01262.21 gi|568163792|ref|YP_008947205.1| - 0.044 13.1 0.2 0.19 11.0 0.2 1.9 1 1 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain AdoHcyase_NAD PF00670.21 gi|568163792|ref|YP_008947205.1| - 0.13 12.4 0.0 0.26 11.3 0.0 1.5 1 0 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IlvN PF07991.12 gi|568163792|ref|YP_008947205.1| - 0.13 11.8 0.0 0.25 10.9 0.0 1.5 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain PIG-L PF02585.17 gi|568163793|ref|YP_008947206.1| - 1.3e-21 77.6 0.0 1.8e-21 77.1 0.0 1.2 1 0 0 1 1 1 1 GlcNAc-PI de-N-acetylase GIIM PF08388.11 gi|568163793|ref|YP_008947206.1| - 0.37 10.9 2.2 0.51 10.4 0.9 1.8 2 0 0 2 2 2 0 Group II intron, maturase-specific domain RraA-like PF03737.15 gi|568163794|ref|YP_008947207.1| - 2e-41 141.6 0.7 2.7e-41 141.2 0.7 1.1 1 0 0 1 1 1 1 Aldolase/RraA Ald_Xan_dh_C2 PF02738.18 gi|568163795|ref|YP_008947208.1| - 3e-112 375.9 3.0 1e-90 304.8 0.2 2.0 1 1 1 2 2 2 2 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 gi|568163795|ref|YP_008947208.1| - 2.6e-17 63.2 0.0 5.2e-17 62.2 0.0 1.6 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Transketolase_C PF02780.20 gi|568163795|ref|YP_008947208.1| - 0.0021 17.9 0.8 0.95 9.4 0.1 3.5 3 0 0 3 3 3 1 Transketolase, C-terminal domain Pro-kuma_activ PF09286.11 gi|568163796|ref|YP_008947209.1| - 5e-11 43.1 0.2 7.2e-10 39.3 0.0 2.5 2 0 0 2 2 2 1 Pro-kumamolisin, activation domain Peptidase_S8 PF00082.22 gi|568163796|ref|YP_008947209.1| - 6e-07 29.0 0.2 2.1e-06 27.3 0.1 1.9 2 0 0 2 2 2 1 Subtilase family MG2 PF01835.19 gi|568163796|ref|YP_008947209.1| - 2.6e-05 24.6 0.2 0.98 9.9 0.0 4.4 6 0 0 6 6 6 2 MG2 domain FlgD_ig PF13860.6 gi|568163796|ref|YP_008947209.1| - 0.18 11.7 2.8 1.9 8.4 0.0 3.8 4 0 0 4 4 4 0 FlgD Ig-like domain PGF-CTERM PF18204.1 gi|568163796|ref|YP_008947209.1| - 1.9 8.6 4.9 5.5 7.1 4.9 1.9 1 0 0 1 1 1 0 PGF-CTERM motif Stevor PF17410.2 gi|568163796|ref|YP_008947209.1| - 2 7.9 5.5 3.6 7.1 5.5 1.4 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame PNGaseA PF12222.8 gi|568163797|ref|YP_008947210.1| - 6.8e-33 114.2 4.1 3.8e-31 108.4 4.1 2.2 1 1 0 1 1 1 1 Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A AMP-binding PF00501.28 gi|568163798|ref|YP_008947211.1| - 1.6e-69 234.6 0.0 2e-69 234.2 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|568163798|ref|YP_008947211.1| - 1.3e-27 96.6 0.4 2.3e-27 95.8 0.4 1.4 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain tRNA_edit PF04073.15 gi|568163799|ref|YP_008947212.1| - 1.2e-27 96.4 0.1 1.5e-27 96.1 0.1 1.1 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain YscO PF07321.12 gi|568164850|ref|YP_008947213.1| - 0.005 16.8 0.6 0.0055 16.7 0.6 1.1 1 0 0 1 1 1 1 Type III secretion protein YscO COMM_domain PF07258.14 gi|568164850|ref|YP_008947213.1| - 0.0053 16.9 0.8 0.14 12.3 0.4 2.1 2 0 0 2 2 2 1 COMM domain Cas_St_Csn2 PF16813.5 gi|568164850|ref|YP_008947213.1| - 0.018 14.2 0.5 0.018 14.2 0.5 1.0 1 0 0 1 1 1 0 CRISPR-associated protein Csn2 subfamily St DUF948 PF06103.11 gi|568164850|ref|YP_008947213.1| - 0.019 15.2 0.1 0.022 15.0 0.1 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) NleF_casp_inhib PF16809.5 gi|568164850|ref|YP_008947213.1| - 0.029 14.3 1.9 0.033 14.1 1.9 1.2 1 0 0 1 1 1 0 NleF caspase inhibitor HisKA PF00512.25 gi|568164850|ref|YP_008947213.1| - 0.031 14.3 1.3 0.031 14.3 1.3 1.7 1 1 1 2 2 2 0 His Kinase A (phospho-acceptor) domain YojJ PF10372.9 gi|568164850|ref|YP_008947213.1| - 0.04 14.0 2.2 0.082 13.0 1.7 1.9 1 1 1 2 2 2 0 Bacterial membrane-spanning protein N-terminus DegS PF05384.11 gi|568164850|ref|YP_008947213.1| - 0.043 13.3 2.1 0.053 13.0 1.4 1.6 1 1 0 1 1 1 0 Sensor protein DegS YtxH PF12732.7 gi|568164850|ref|YP_008947213.1| - 0.055 14.0 0.6 0.083 13.4 0.6 1.5 1 1 0 1 1 1 0 YtxH-like protein Glu-tRNAGln PF02686.15 gi|568164850|ref|YP_008947213.1| - 0.071 13.4 3.1 0.089 13.1 3.1 1.2 1 0 0 1 1 1 0 Glu-tRNAGln amidotransferase C subunit DUF1664 PF07889.12 gi|568164850|ref|YP_008947213.1| - 0.096 12.7 1.0 0.12 12.4 1.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) CorA PF01544.18 gi|568164850|ref|YP_008947213.1| - 0.11 11.7 4.4 0.48 9.7 1.3 1.9 1 1 1 2 2 2 0 CorA-like Mg2+ transporter protein TipAS PF07739.13 gi|568164850|ref|YP_008947213.1| - 0.12 12.9 0.0 0.14 12.7 0.0 1.1 1 0 0 1 1 1 0 TipAS antibiotic-recognition domain FlaC_arch PF05377.11 gi|568164850|ref|YP_008947213.1| - 0.23 11.9 2.1 0.66 10.4 1.2 1.9 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) TraF_2 PF13729.6 gi|568164850|ref|YP_008947213.1| - 1.9 7.8 5.4 2 7.7 5.4 1.0 1 0 0 1 1 1 0 F plasmid transfer operon, TraF, protein GATase PF00117.28 gi|568163800|ref|YP_008947214.1| - 4.6e-17 62.4 0.0 6.2e-17 62.0 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|568163800|ref|YP_008947214.1| - 2.8e-05 24.0 0.3 0.00013 21.8 0.1 2.0 2 1 0 2 2 2 1 Peptidase C26 DJ-1_PfpI PF01965.24 gi|568163800|ref|YP_008947214.1| - 0.013 15.3 0.0 0.021 14.6 0.0 1.3 1 0 0 1 1 1 0 DJ-1/PfpI family HTS PF04204.16 gi|568163800|ref|YP_008947214.1| - 0.082 11.8 0.0 0.1 11.5 0.0 1.4 1 1 0 1 1 1 0 Homoserine O-succinyltransferase GATase_3 PF07685.14 gi|568163800|ref|YP_008947214.1| - 0.13 11.8 0.0 0.19 11.3 0.0 1.2 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain ADC PF06314.11 gi|568163801|ref|YP_008947215.1| - 1.5e-56 191.6 0.0 1.8e-56 191.3 0.0 1.0 1 0 0 1 1 1 1 Acetoacetate decarboxylase (ADC) Methyltransf_24 PF13578.6 gi|568163802|ref|YP_008947216.1| - 4.8e-12 46.8 0.0 6.4e-12 46.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_3 PF01596.17 gi|568163802|ref|YP_008947216.1| - 3e-06 26.6 0.0 3.5e-06 26.4 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase CmcI PF04989.12 gi|568163802|ref|YP_008947216.1| - 4.4e-06 26.5 0.0 6.3e-06 26.0 0.0 1.2 1 0 0 1 1 1 1 Cephalosporin hydroxylase TylF PF05711.11 gi|568163802|ref|YP_008947216.1| - 0.0019 17.5 0.0 0.0034 16.7 0.0 1.4 2 0 0 2 2 2 1 Macrocin-O-methyltransferase (TylF) Glyco_hydro_31 PF01055.26 gi|568163804|ref|YP_008947218.1| - 8.7e-129 430.5 2.4 1.1e-128 430.2 2.4 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Gal_mutarotas_2 PF13802.6 gi|568163804|ref|YP_008947218.1| - 1.5e-20 73.3 0.1 3.6e-20 72.1 0.1 1.7 1 0 0 1 1 1 1 Galactose mutarotase-like GHL15 PF14885.6 gi|568163804|ref|YP_008947218.1| - 0.013 15.5 0.1 0.025 14.5 0.1 1.5 1 0 0 1 1 1 0 Hypothetical glycosyl hydrolase family 15 Retrotrans_gag PF03732.17 gi|568163804|ref|YP_008947218.1| - 0.067 13.5 0.1 0.16 12.3 0.1 1.6 1 0 0 1 1 1 0 Retrotransposon gag protein DUF4479 PF14794.6 gi|568163804|ref|YP_008947218.1| - 0.16 11.8 0.0 0.36 10.7 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4479) Regulator_TrmB PF11495.8 gi|568164851|ref|YP_008947219.1| - 2e-65 220.3 1.5 2.4e-65 220.0 1.5 1.1 1 0 0 1 1 1 1 Archaeal transcriptional regulator TrmB TrmB PF01978.19 gi|568164851|ref|YP_008947219.1| - 1.7e-12 47.0 0.1 4.1e-12 45.8 0.1 1.7 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|568164851|ref|YP_008947219.1| - 0.031 14.2 0.0 0.057 13.3 0.0 1.4 1 0 0 1 1 1 0 MarR family Phage_connect_1 PF05135.13 gi|568164851|ref|YP_008947219.1| - 0.095 13.2 0.1 1.7 9.2 0.0 2.4 2 0 0 2 2 2 0 Phage gp6-like head-tail connector protein Glyco_hydro_57 PF03065.15 gi|568163805|ref|YP_008947220.1| - 1.9e-41 142.4 1.3 2.7e-37 128.7 1.3 2.5 1 1 0 1 1 1 1 Glycosyl hydrolase family 57 DUF2057 PF09829.9 gi|568163805|ref|YP_008947220.1| - 0.11 12.7 0.3 0.3 11.2 0.3 1.8 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2057) CBM53 PF16760.5 gi|568163805|ref|YP_008947220.1| - 3.4 8.3 17.1 3.5 8.3 0.2 3.2 3 0 0 3 3 3 0 Starch/carbohydrate-binding module (family 53) BPD_transp_1 PF00528.22 gi|568163806|ref|YP_008947221.1| - 2.1e-14 53.7 24.3 2.1e-14 53.7 24.3 2.2 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|568163807|ref|YP_008947222.1| - 6.1e-16 58.7 22.8 6.1e-16 58.7 22.8 2.2 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component TM_PBP2_N PF16296.5 gi|568163807|ref|YP_008947222.1| - 0.039 14.1 2.4 0.083 13.0 2.4 1.5 1 0 0 1 1 1 0 N-terminal of TM subunit in PBP-dependent ABC transporters Zn_peptidase PF04228.13 gi|568163808|ref|YP_008947223.1| - 0.06 12.8 0.2 0.099 12.1 0.2 1.3 1 0 0 1 1 1 0 Putative neutral zinc metallopeptidase DUF4834 PF16118.5 gi|568163808|ref|YP_008947223.1| - 0.075 14.0 0.3 0.18 12.8 0.3 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) SP_C-Propep PF08999.10 gi|568163808|ref|YP_008947223.1| - 0.076 12.8 1.5 0.14 11.9 1.5 1.4 1 0 0 1 1 1 0 Surfactant protein C, N terminal propeptide Shisa PF13908.6 gi|568163808|ref|YP_008947223.1| - 0.15 12.3 1.7 0.31 11.3 1.7 1.4 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator Tmemb_9 PF05434.11 gi|568163808|ref|YP_008947223.1| - 0.15 11.9 0.2 0.27 11.1 0.2 1.3 1 0 0 1 1 1 0 TMEM9 SpoIIIAH PF12685.7 gi|568163808|ref|YP_008947223.1| - 1.5 8.6 6.9 0.042 13.7 0.8 1.5 2 0 0 2 2 2 0 SpoIIIAH-like protein DUF4083 PF13314.6 gi|568163808|ref|YP_008947223.1| - 1.7 8.7 8.3 0.86 9.6 6.1 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4083) FSA_C PF10479.9 gi|568163808|ref|YP_008947223.1| - 1.8 6.6 6.2 3.1 5.8 6.2 1.2 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus Sporozoite_P67 PF05642.11 gi|568163808|ref|YP_008947223.1| - 3 5.8 9.9 4.4 5.3 9.9 1.2 1 0 0 1 1 1 0 Sporozoite P67 surface antigen SprA-related PF12118.8 gi|568163808|ref|YP_008947223.1| - 5.4 6.1 9.9 9.3 5.3 9.9 1.3 1 0 0 1 1 1 0 SprA-related family ABC_tran PF00005.27 gi|568163809|ref|YP_008947224.1| - 2.6e-33 115.4 0.0 5.2e-33 114.5 0.0 1.5 1 0 0 1 1 1 1 ABC transporter OB_MalK PF17912.1 gi|568163809|ref|YP_008947224.1| - 1.3e-13 51.6 0.1 1.2e-12 48.5 0.1 2.6 2 0 0 2 2 2 1 MalK OB fold domain CysA_C_terminal PF17850.1 gi|568163809|ref|YP_008947224.1| - 4e-08 33.7 0.0 1.5e-07 31.9 0.0 2.0 2 0 0 2 2 2 1 CysA C-terminal regulatory domain AAA_21 PF13304.6 gi|568163809|ref|YP_008947224.1| - 1.3e-07 31.7 0.0 0.012 15.5 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system TOBE_2 PF08402.10 gi|568163809|ref|YP_008947224.1| - 1.6e-07 31.4 0.0 3.9e-07 30.1 0.0 1.7 1 0 0 1 1 1 1 TOBE domain SMC_N PF02463.19 gi|568163809|ref|YP_008947224.1| - 9.3e-06 25.2 1.0 0.0002 20.9 1.0 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain ATPase_2 PF01637.18 gi|568163809|ref|YP_008947224.1| - 0.00049 20.1 0.1 0.0016 18.4 0.0 1.9 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea Rad17 PF03215.15 gi|568163809|ref|YP_008947224.1| - 0.0016 18.4 0.0 0.0026 17.7 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain RsgA_GTPase PF03193.16 gi|568163809|ref|YP_008947224.1| - 0.0023 17.9 0.3 0.014 15.3 0.0 2.2 2 1 0 2 2 2 1 RsgA GTPase ABC_ATPase PF09818.9 gi|568163809|ref|YP_008947224.1| - 0.008 15.0 0.3 4.7 5.9 0.0 3.0 2 1 0 2 2 2 2 Predicted ATPase of the ABC class AAA_23 PF13476.6 gi|568163809|ref|YP_008947224.1| - 0.0082 16.7 3.5 0.014 15.9 0.1 2.4 3 0 0 3 3 2 1 AAA domain NTPase_1 PF03266.15 gi|568163809|ref|YP_008947224.1| - 0.01 15.8 0.0 4.1 7.3 0.0 2.5 2 0 0 2 2 2 1 NTPase AAA_14 PF13173.6 gi|568163809|ref|YP_008947224.1| - 0.012 15.6 0.1 0.1 12.7 0.0 2.5 3 0 0 3 3 2 0 AAA domain AAA_16 PF13191.6 gi|568163809|ref|YP_008947224.1| - 0.02 15.3 0.1 0.04 14.3 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain AAA_29 PF13555.6 gi|568163809|ref|YP_008947224.1| - 0.021 14.6 0.1 0.046 13.5 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_25 PF13481.6 gi|568163809|ref|YP_008947224.1| - 0.062 12.9 0.0 1.5 8.3 0.0 2.2 2 0 0 2 2 2 0 AAA domain T2SSE PF00437.20 gi|568163809|ref|YP_008947224.1| - 0.07 12.2 0.0 0.16 11.0 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein NACHT PF05729.12 gi|568163809|ref|YP_008947224.1| - 0.07 13.0 0.2 0.19 11.6 0.0 1.8 2 0 0 2 2 2 0 NACHT domain AAA_22 PF13401.6 gi|568163809|ref|YP_008947224.1| - 0.079 13.2 0.2 0.23 11.7 0.2 1.8 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|568163809|ref|YP_008947224.1| - 0.082 12.6 0.0 0.41 10.3 0.0 2.0 2 1 0 2 2 2 0 AAA domain DLIC PF05783.11 gi|568163809|ref|YP_008947224.1| - 0.14 10.9 0.1 0.22 10.3 0.1 1.2 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) AAA_28 PF13521.6 gi|568163809|ref|YP_008947224.1| - 0.18 12.1 0.0 0.48 10.6 0.0 1.7 2 0 0 2 2 2 0 AAA domain CBS PF00571.28 gi|568163810|ref|YP_008947225.1| - 3.2e-27 94.7 4.4 5.8e-13 49.1 0.5 2.2 2 0 0 2 2 2 2 CBS domain HAMP_N3 PF18575.1 gi|568163810|ref|YP_008947225.1| - 0.023 14.3 0.1 0.044 13.4 0.1 1.4 1 0 0 1 1 1 0 HAMP N-terminal domain 3 YopE PF03545.13 gi|568163810|ref|YP_008947225.1| - 0.087 13.0 0.0 0.22 11.7 0.0 1.6 2 0 0 2 2 2 0 Yersinia virulence determinant (YopE) Sigma70_r3 PF04539.16 gi|568163811|ref|YP_008947226.1| - 0.11 12.5 0.0 0.2 11.8 0.0 1.4 1 0 0 1 1 1 0 Sigma-70 region 3 Pyr_redox_2 PF07992.14 gi|568163812|ref|YP_008947227.1| - 7.4e-39 133.7 1.6 8.5e-39 133.5 1.6 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|568163812|ref|YP_008947227.1| - 9.3e-20 71.1 2.2 4.7e-16 58.9 0.3 2.4 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|568163812|ref|YP_008947227.1| - 2.3e-07 30.2 3.0 7.5e-06 25.3 0.3 2.9 2 1 1 3 3 3 1 FAD binding domain DAO PF01266.24 gi|568163812|ref|YP_008947227.1| - 5.5e-07 29.5 1.0 8.3e-05 22.3 0.4 2.9 3 0 0 3 3 3 1 FAD dependent oxidoreductase Pyr_redox PF00070.27 gi|568163812|ref|YP_008947227.1| - 1.6e-06 28.6 5.5 0.0001 22.8 0.2 3.0 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|568163812|ref|YP_008947227.1| - 4.3e-05 23.1 0.2 0.00017 21.0 0.0 1.9 2 0 0 2 2 2 1 FAD dependent oxidoreductase Thi4 PF01946.17 gi|568163812|ref|YP_008947227.1| - 5.2e-05 22.6 0.4 0.016 14.5 0.1 2.4 2 0 0 2 2 2 2 Thi4 family NAD_binding_8 PF13450.6 gi|568163812|ref|YP_008947227.1| - 9.4e-05 22.6 0.2 0.00019 21.6 0.2 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain GIDA PF01134.22 gi|568163812|ref|YP_008947227.1| - 0.00022 20.4 0.1 0.00022 20.4 0.1 3.4 2 2 1 4 4 4 1 Glucose inhibited division protein A HI0933_like PF03486.14 gi|568163812|ref|YP_008947227.1| - 0.003 16.3 1.3 0.026 13.2 0.0 2.5 3 0 0 3 3 3 1 HI0933-like protein Lycopene_cycl PF05834.12 gi|568163812|ref|YP_008947227.1| - 0.014 14.5 0.1 0.18 10.8 0.1 2.1 2 0 0 2 2 2 0 Lycopene cyclase protein FAD_binding_3 PF01494.19 gi|568163812|ref|YP_008947227.1| - 0.017 14.4 0.0 0.027 13.7 0.0 1.3 1 0 0 1 1 1 0 FAD binding domain AlaDh_PNT_C PF01262.21 gi|568163812|ref|YP_008947227.1| - 0.05 12.9 0.1 0.47 9.7 0.0 2.3 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain PMSR PF01625.21 gi|568163813|ref|YP_008947228.1| - 6.5e-65 218.0 0.5 7.6e-65 217.8 0.5 1.0 1 0 0 1 1 1 1 Peptide methionine sulfoxide reductase TrmB PF01978.19 gi|568163814|ref|YP_008947229.1| - 4e-10 39.4 0.1 1.1e-05 25.2 0.0 2.4 2 0 0 2 2 2 2 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|568163814|ref|YP_008947229.1| - 3.6e-09 36.0 4.1 0.00028 20.4 0.8 3.1 3 0 0 3 3 3 2 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|568163814|ref|YP_008947229.1| - 4.9e-09 36.0 0.5 1.2e-06 28.3 0.2 2.4 2 0 0 2 2 2 1 MarR family HTH_11 PF08279.12 gi|568163814|ref|YP_008947229.1| - 8.3e-09 35.3 2.7 0.0011 18.8 0.1 2.9 3 0 0 3 3 2 2 HTH domain HTH_45 PF14947.6 gi|568163814|ref|YP_008947229.1| - 6.3e-08 32.5 9.9 1.1e-07 31.8 0.3 2.8 3 0 0 3 3 2 1 Winged helix-turn-helix MarR_2 PF12802.7 gi|568163814|ref|YP_008947229.1| - 8.9e-08 31.9 0.0 0.0071 16.2 0.0 2.3 2 0 0 2 2 2 2 MarR family HTH_27 PF13463.6 gi|568163814|ref|YP_008947229.1| - 9.8e-07 29.2 0.1 9.6e-06 26.0 0.1 2.1 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_20 PF12840.7 gi|568163814|ref|YP_008947229.1| - 9.9e-06 25.5 0.0 0.1 12.6 0.0 2.3 2 0 0 2 2 2 2 Helix-turn-helix domain HxlR PF01638.17 gi|568163814|ref|YP_008947229.1| - 3.1e-05 23.7 1.2 0.00049 19.9 0.1 2.4 2 0 0 2 2 2 1 HxlR-like helix-turn-helix GntR PF00392.21 gi|568163814|ref|YP_008947229.1| - 3.8e-05 23.3 0.0 0.27 10.9 0.0 2.3 2 0 0 2 2 2 2 Bacterial regulatory proteins, gntR family HTH_Crp_2 PF13545.6 gi|568163814|ref|YP_008947229.1| - 8.5e-05 22.5 0.1 0.12 12.4 0.1 2.4 2 0 0 2 2 2 2 Crp-like helix-turn-helix domain HTH_23 PF13384.6 gi|568163814|ref|YP_008947229.1| - 0.00017 21.3 0.0 0.0018 18.0 0.0 2.1 2 0 0 2 2 2 1 Homeodomain-like domain HTH_30 PF13556.6 gi|568163814|ref|YP_008947229.1| - 0.00038 20.2 0.0 0.0015 18.3 0.0 1.9 2 0 0 2 2 2 1 PucR C-terminal helix-turn-helix domain HTH_29 PF13551.6 gi|568163814|ref|YP_008947229.1| - 0.00053 19.9 0.0 0.022 14.7 0.0 2.2 2 0 0 2 2 2 1 Winged helix-turn helix HTH_10 PF04967.12 gi|568163814|ref|YP_008947229.1| - 0.001 18.8 0.6 0.0095 15.7 0.0 2.4 2 0 0 2 2 2 1 HTH DNA binding domain DUF4364 PF14277.6 gi|568163814|ref|YP_008947229.1| - 0.0013 18.5 0.4 0.0039 17.0 0.3 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF4364) HTH_7 PF02796.15 gi|568163814|ref|YP_008947229.1| - 0.0038 17.3 0.0 0.16 12.0 0.0 2.6 2 0 0 2 2 2 1 Helix-turn-helix domain of resolvase Rrf2 PF02082.20 gi|568163814|ref|YP_008947229.1| - 0.0051 17.1 0.4 0.66 10.4 0.1 2.4 2 0 0 2 2 2 1 Transcriptional regulator HTH_8 PF02954.19 gi|568163814|ref|YP_008947229.1| - 0.0062 16.3 0.0 0.013 15.2 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family Mrr_N PF14338.6 gi|568163814|ref|YP_008947229.1| - 0.007 16.5 0.1 0.13 12.5 0.0 2.4 2 1 0 2 2 2 1 Mrr N-terminal domain HTH_AsnC-type PF13404.6 gi|568163814|ref|YP_008947229.1| - 0.0087 15.9 0.0 0.47 10.3 0.0 2.4 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain Penicillinase_R PF03965.16 gi|568163814|ref|YP_008947229.1| - 0.01 16.2 1.1 0.35 11.2 0.1 2.2 2 0 0 2 2 2 0 Penicillinase repressor HTH_Mga PF08280.11 gi|568163814|ref|YP_008947229.1| - 0.011 15.8 4.5 0.036 14.1 0.4 2.6 2 0 0 2 2 2 0 M protein trans-acting positive regulator (MGA) HTH domain HTH_DeoR PF08220.12 gi|568163814|ref|YP_008947229.1| - 0.011 15.4 0.4 0.35 10.7 0.0 2.5 2 1 0 2 2 2 0 DeoR-like helix-turn-helix domain Fe_dep_repress PF01325.19 gi|568163814|ref|YP_008947229.1| - 0.028 14.6 0.1 0.8 9.9 0.0 2.5 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain MerR_1 PF13411.6 gi|568163814|ref|YP_008947229.1| - 0.029 14.5 0.0 0.069 13.3 0.0 1.7 1 0 0 1 1 1 0 MerR HTH family regulatory protein RPA_C PF08784.11 gi|568163814|ref|YP_008947229.1| - 0.043 14.5 0.3 0.35 11.6 0.0 2.1 2 0 0 2 2 2 0 Replication protein A C terminal HTH_12 PF08461.10 gi|568163814|ref|YP_008947229.1| - 0.049 13.6 0.5 1 9.3 0.1 2.4 2 0 0 2 2 2 0 Ribonuclease R winged-helix domain HTH_34 PF13601.6 gi|568163814|ref|YP_008947229.1| - 0.052 13.7 0.9 0.24 11.6 0.1 2.4 2 1 0 2 2 2 0 Winged helix DNA-binding domain HTH_36 PF13730.6 gi|568163814|ref|YP_008947229.1| - 0.053 13.5 0.5 2.1 8.3 0.2 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain DUF4254 PF14063.6 gi|568163814|ref|YP_008947229.1| - 0.062 13.1 0.6 0.093 12.5 0.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4254) MerR PF00376.23 gi|568163814|ref|YP_008947229.1| - 0.063 13.1 0.0 0.15 11.8 0.0 1.6 1 0 0 1 1 1 0 MerR family regulatory protein HTH_17 PF12728.7 gi|568163814|ref|YP_008947229.1| - 0.068 13.4 1.0 0.38 11.0 0.1 2.7 2 2 1 3 3 3 0 Helix-turn-helix domain SelB-wing_3 PF09107.11 gi|568163814|ref|YP_008947229.1| - 0.07 12.8 0.1 7.6 6.3 0.0 2.5 2 0 0 2 2 2 0 Elongation factor SelB, winged helix HTH_AraC PF00165.23 gi|568163814|ref|YP_008947229.1| - 0.072 13.2 0.3 0.82 9.9 0.0 2.7 3 0 0 3 3 3 0 Bacterial regulatory helix-turn-helix proteins, AraC family HTH_28 PF13518.6 gi|568163814|ref|YP_008947229.1| - 0.079 13.1 0.0 0.25 11.5 0.0 1.8 2 0 0 2 2 1 0 Helix-turn-helix domain FaeA PF04703.12 gi|568163814|ref|YP_008947229.1| - 0.089 13.2 0.2 0.86 10.0 0.0 2.2 2 0 0 2 2 2 0 FaeA-like protein Sigma70_r4 PF04545.16 gi|568163814|ref|YP_008947229.1| - 0.14 11.7 0.0 0.75 9.4 0.0 2.1 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_47 PF16221.5 gi|568163814|ref|YP_008947229.1| - 0.14 11.7 0.0 4 7.1 0.0 2.7 2 1 1 3 3 3 0 winged helix-turn-helix DUF1690 PF07956.11 gi|568163814|ref|YP_008947229.1| - 0.15 12.5 1.5 1.5 9.2 1.5 2.1 1 1 0 1 1 1 0 Protein of Unknown function (DUF1690) Herpes_UL14 PF03580.14 gi|568163814|ref|YP_008947229.1| - 0.15 12.3 0.2 0.25 11.6 0.2 1.3 1 0 0 1 1 1 0 Herpesvirus UL14-like protein Terminase_5 PF06056.12 gi|568163814|ref|YP_008947229.1| - 0.15 12.0 0.1 1.1 9.3 0.0 2.0 2 0 0 2 2 2 0 Putative ATPase subunit of terminase (gpP-like) UPF0122 PF04297.14 gi|568163814|ref|YP_008947229.1| - 1.3 9.3 7.4 1.2 9.4 1.1 2.8 1 1 2 3 3 3 0 Putative helix-turn-helix protein, YlxM / p13 like Pkinase PF00069.25 gi|568163815|ref|YP_008947230.1| - 1.9e-33 115.9 0.0 2.8e-33 115.4 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 gi|568163815|ref|YP_008947230.1| - 8.8e-13 48.1 0.0 4.1e-12 45.9 0.0 2.1 1 1 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 gi|568163815|ref|YP_008947230.1| - 0.00028 20.3 0.0 0.04 13.2 0.0 2.2 2 0 0 2 2 2 2 Kinase-like Kdo PF06293.14 gi|568163815|ref|YP_008947230.1| - 0.0011 18.3 0.0 0.0018 17.7 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 gi|568163815|ref|YP_008947230.1| - 0.016 14.8 0.2 0.072 12.7 0.0 1.9 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 P5CR_dimer PF14748.6 gi|568164854|ref|YP_008947233.1| - 2e-06 28.0 0.0 2.1e-06 27.9 0.0 1.0 1 0 0 1 1 1 1 Pyrroline-5-carboxylate reductase dimerisation Lactamase_B PF00753.27 gi|568163816|ref|YP_008947234.1| - 3.8e-13 49.9 0.1 4.2e-12 46.5 0.1 2.2 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|568163816|ref|YP_008947234.1| - 8.2e-07 28.7 0.0 1.2e-06 28.2 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain tRNA_edit PF04073.15 gi|568164856|ref|YP_008947236.1| - 1.5e-06 28.3 0.1 1.8e-06 28.0 0.1 1.1 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain MFS_1 PF07690.16 gi|568164857|ref|YP_008947237.1| - 3.3e-25 88.8 37.1 5.8e-14 51.8 17.4 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 gi|568164857|ref|YP_008947237.1| - 0.051 12.0 9.6 0.017 13.6 1.8 2.1 2 0 0 2 2 2 0 Transmembrane secretion effector OATP PF03137.20 gi|568164857|ref|YP_008947237.1| - 1.4 7.1 17.9 0.061 11.6 3.2 2.8 2 1 1 3 3 3 0 Organic Anion Transporter Polypeptide (OATP) family MFS_1 PF07690.16 gi|568163817|ref|YP_008947238.1| - 5.6e-59 199.8 65.9 1.8e-48 165.3 47.3 2.7 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|568163817|ref|YP_008947238.1| - 8.8e-12 44.6 31.3 4.9e-11 42.2 12.4 2.8 2 1 0 2 2 2 2 Sugar (and other) transporter NDUF_B12 PF08122.12 gi|568163817|ref|YP_008947238.1| - 0.085 12.9 1.0 7.6 6.7 0.0 2.9 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase B12 subunit family OATP PF03137.20 gi|568163817|ref|YP_008947238.1| - 1 7.6 24.6 0.019 13.2 3.3 4.0 2 2 2 4 4 4 0 Organic Anion Transporter Polypeptide (OATP) family NPCBM_assoc PF10633.9 gi|568163818|ref|YP_008947239.1| - 7.1e-16 58.2 14.0 0.012 15.9 0.1 7.7 7 1 1 8 8 8 4 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.11 gi|568163818|ref|YP_008947239.1| - 2.2e-05 24.6 31.2 0.14 12.4 2.5 6.1 4 2 2 7 7 7 3 CARDB Gryzun PF07919.12 gi|568163818|ref|YP_008947239.1| - 0.024 13.4 0.0 0.11 11.2 0.0 2.1 3 0 0 3 3 3 0 Gryzun, putative trafficking through Golgi DUF5044 PF16447.5 gi|568163818|ref|YP_008947239.1| - 0.07 13.0 0.1 5 6.9 0.0 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF5044) RIFIN PF02009.16 gi|568163818|ref|YP_008947239.1| - 3.4 7.5 8.4 5.3 6.8 8.4 1.2 1 0 0 1 1 1 0 Rifin AMP-binding PF00501.28 gi|568163819|ref|YP_008947240.1| - 5.9e-83 278.8 0.0 7.2e-83 278.5 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 gi|568163819|ref|YP_008947240.1| - 1e-18 66.9 2.2 1.9e-18 66.1 2.2 1.5 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 gi|568163819|ref|YP_008947240.1| - 1.1e-18 67.9 0.1 2.2e-18 67.0 0.1 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain MFS_1 PF07690.16 gi|568164858|ref|YP_008947241.1| - 0.48 9.3 53.9 61 2.4 52.7 3.5 1 1 0 1 1 1 0 Major Facilitator Superfamily MarR PF01047.22 gi|568163820|ref|YP_008947242.1| - 6.6e-07 29.2 0.2 1.2e-06 28.4 0.2 1.3 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.6 gi|568163820|ref|YP_008947242.1| - 1.6e-06 28.2 0.2 1.9e-06 27.9 0.2 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_27 PF13463.6 gi|568163820|ref|YP_008947242.1| - 2.9e-06 27.7 0.2 4.6e-06 27.0 0.0 1.4 2 0 0 2 2 1 1 Winged helix DNA-binding domain HTH_24 PF13412.6 gi|568163820|ref|YP_008947242.1| - 3e-05 23.5 2.5 5.1e-05 22.7 2.5 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|568163820|ref|YP_008947242.1| - 0.00012 21.9 0.3 0.00022 21.0 0.3 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_Crp_2 PF13545.6 gi|568163820|ref|YP_008947242.1| - 0.00022 21.2 0.1 0.00041 20.3 0.1 1.6 1 1 1 2 2 2 1 Crp-like helix-turn-helix domain MarR_2 PF12802.7 gi|568163820|ref|YP_008947242.1| - 0.00027 20.7 0.0 0.00038 20.3 0.0 1.2 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|568163820|ref|YP_008947242.1| - 0.00054 19.8 0.4 0.00093 19.0 0.1 1.5 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Rrf2 PF02082.20 gi|568163820|ref|YP_008947242.1| - 0.0061 16.9 0.1 0.0095 16.3 0.1 1.3 1 0 0 1 1 1 1 Transcriptional regulator LexA_DNA_bind PF01726.16 gi|568163820|ref|YP_008947242.1| - 0.015 15.0 0.1 0.022 14.5 0.1 1.3 1 0 0 1 1 1 0 LexA DNA binding domain GntR PF00392.21 gi|568163820|ref|YP_008947242.1| - 0.022 14.4 0.2 0.039 13.6 0.1 1.5 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family Fe_dep_repress PF01325.19 gi|568163820|ref|YP_008947242.1| - 0.038 14.2 0.0 0.071 13.3 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_11 PF08279.12 gi|568163820|ref|YP_008947242.1| - 0.06 13.3 1.1 0.11 12.5 1.0 1.5 1 1 0 1 1 1 0 HTH domain RNA_pol_Rpb2_6 PF00562.28 gi|568163820|ref|YP_008947242.1| - 0.073 12.1 0.1 0.073 12.1 0.1 1.0 1 0 0 1 1 1 0 RNA polymerase Rpb2, domain 6 HTH_DeoR PF08220.12 gi|568163820|ref|YP_008947242.1| - 0.13 12.0 0.3 0.42 10.4 0.2 1.9 2 1 0 2 2 2 0 DeoR-like helix-turn-helix domain Crp PF00325.20 gi|568163820|ref|YP_008947242.1| - 0.14 11.8 0.8 1.5 8.5 0.8 2.3 1 1 0 1 1 1 0 Bacterial regulatory proteins, crp family HTH_20 PF12840.7 gi|568163820|ref|YP_008947242.1| - 0.15 12.2 0.1 0.22 11.6 0.1 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain IU_nuc_hydro PF01156.19 gi|568163821|ref|YP_008947243.1| - 1.2e-73 248.4 0.0 1.3e-73 248.2 0.0 1.0 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase FAD_binding_4 PF01565.23 gi|568163822|ref|YP_008947244.1| - 3.4e-38 130.5 0.0 5.3e-38 129.9 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain FAD-oxidase_C PF02913.19 gi|568163822|ref|YP_008947244.1| - 1.2e-25 90.6 0.0 1.7e-25 90.1 0.0 1.2 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_5 PF00941.21 gi|568163822|ref|YP_008947244.1| - 0.065 13.0 0.2 0.18 11.5 0.2 1.7 1 1 0 1 1 1 0 FAD binding domain in molybdopterin dehydrogenase FAD_binding_4 PF01565.23 gi|568163823|ref|YP_008947245.1| - 3.2e-07 30.2 0.0 6e-07 29.3 0.0 1.4 1 0 0 1 1 1 1 FAD binding domain AIRC PF00731.20 gi|568163824|ref|YP_008947246.1| - 5.1e-68 227.3 0.4 5.7e-68 227.1 0.4 1.0 1 0 0 1 1 1 1 AIR carboxylase Fe-ADH_2 PF13685.6 gi|568163824|ref|YP_008947246.1| - 0.00075 19.3 0.0 0.00091 19.0 0.0 1.2 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.19 gi|568163824|ref|YP_008947246.1| - 0.0059 15.5 0.1 0.0088 14.9 0.1 1.2 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Glutaredoxin PF00462.24 gi|568163824|ref|YP_008947246.1| - 0.013 15.7 0.1 0.039 14.2 0.0 1.8 2 0 0 2 2 2 0 Glutaredoxin DAGK_cat PF00781.24 gi|568163824|ref|YP_008947246.1| - 0.014 15.0 0.0 0.1 12.2 0.0 1.9 2 0 0 2 2 2 0 Diacylglycerol kinase catalytic domain DUF4419 PF14388.6 gi|568163824|ref|YP_008947246.1| - 0.05 13.0 0.0 0.074 12.5 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4419) PrpR_N PF06506.11 gi|568163824|ref|YP_008947246.1| - 0.12 11.9 0.1 0.3 10.6 0.1 1.9 1 1 0 1 1 1 0 Propionate catabolism activator ATP-grasp PF02222.22 gi|568163825|ref|YP_008947247.1| - 2.6e-48 163.8 0.0 4e-48 163.2 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain PurK_C PF17769.1 gi|568163825|ref|YP_008947247.1| - 1e-15 57.1 0.2 2e-15 56.2 0.2 1.5 1 0 0 1 1 1 1 Phosphoribosylaminoimidazole carboxylase C-terminal domain ATP-grasp_3 PF02655.14 gi|568163825|ref|YP_008947247.1| - 0.0057 16.7 0.0 0.012 15.7 0.0 1.6 1 1 0 1 1 1 1 ATP-grasp domain Fungal_KA1 PF16797.5 gi|568163825|ref|YP_008947247.1| - 0.042 13.6 0.0 0.083 12.6 0.0 1.4 1 0 0 1 1 1 0 Fungal kinase associated-1 domain HTH_1 PF00126.27 gi|568163826|ref|YP_008947248.1| - 2.2e-05 24.3 0.0 5.2e-05 23.1 0.0 1.5 2 0 0 2 2 2 1 Bacterial regulatory helix-turn-helix protein, lysR family DUF2089 PF09862.9 gi|568163826|ref|YP_008947248.1| - 0.098 12.7 0.1 0.15 12.1 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF2089) Nsp1_C PF05064.13 gi|568163826|ref|YP_008947248.1| - 0.11 12.3 0.9 0.11 12.3 0.9 1.5 2 0 0 2 2 2 0 Nsp1-like C-terminal region SpmSyn_N PF17950.1 gi|568163826|ref|YP_008947248.1| - 0.11 12.6 0.1 0.17 12.1 0.1 1.4 1 0 0 1 1 1 0 S-adenosylmethionine decarboxylase N -terminal Pkinase PF00069.25 gi|568163827|ref|YP_008947249.1| - 1.9e-27 96.3 0.2 5.7e-27 94.7 0.0 1.9 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 gi|568163827|ref|YP_008947249.1| - 2e-10 40.4 0.0 4.5e-10 39.3 0.0 1.6 1 1 0 1 1 1 1 Protein tyrosine kinase TPR_19 PF14559.6 gi|568163827|ref|YP_008947249.1| - 3.5e-08 33.8 0.1 0.0002 21.8 0.1 2.8 2 1 1 3 3 3 3 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|568163827|ref|YP_008947249.1| - 5.3e-07 29.8 6.2 1.4e-05 25.2 0.8 2.5 2 0 0 2 2 2 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_12 PF13424.6 gi|568163827|ref|YP_008947249.1| - 4.7e-06 26.8 2.6 0.34 11.2 0.0 3.9 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_2 PF07719.17 gi|568163827|ref|YP_008947249.1| - 6.7e-06 25.8 8.8 0.0033 17.4 0.1 4.2 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_16 PF13432.6 gi|568163827|ref|YP_008947249.1| - 9.6e-06 26.2 0.0 0.11 13.2 0.1 2.9 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.6 gi|568163827|ref|YP_008947249.1| - 1e-05 25.9 0.2 0.56 11.2 0.0 3.8 2 2 1 3 3 3 1 Tetratricopeptide repeat TPR_1 PF00515.28 gi|568163827|ref|YP_008947249.1| - 1.9e-05 24.2 7.9 0.013 15.2 0.0 4.2 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_8 PF13181.6 gi|568163827|ref|YP_008947249.1| - 8.1e-05 22.5 4.6 0.0056 16.8 0.0 3.3 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.6 gi|568163827|ref|YP_008947249.1| - 0.0015 19.0 2.4 11 6.9 0.0 4.5 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_10 PF13374.6 gi|568163827|ref|YP_008947249.1| - 0.041 13.8 3.6 0.076 12.9 0.0 2.8 3 0 0 3 3 3 0 Tetratricopeptide repeat DUF1955 PF09205.10 gi|568163827|ref|YP_008947249.1| - 0.046 13.5 0.7 0.21 11.3 0.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1955) GP3_package PF16677.5 gi|568163827|ref|YP_008947249.1| - 0.053 13.7 1.2 0.2 11.8 0.3 2.3 2 0 0 2 2 2 0 DNA-packaging protein gp3 HrpB1_HrpK PF09613.10 gi|568163827|ref|YP_008947249.1| - 0.069 12.8 0.0 0.9 9.2 0.0 2.4 2 1 1 3 3 3 0 Bacterial type III secretion protein (HrpB1_HrpK) TPR_7 PF13176.6 gi|568163827|ref|YP_008947249.1| - 0.097 12.7 3.3 5.5 7.2 0.0 4.0 4 0 0 4 4 4 0 Tetratricopeptide repeat APH PF01636.23 gi|568163827|ref|YP_008947249.1| - 0.12 12.3 0.0 15 5.4 0.0 2.4 2 0 0 2 2 2 0 Phosphotransferase enzyme family PPR PF01535.20 gi|568163827|ref|YP_008947249.1| - 0.29 11.5 5.9 62 4.2 0.0 4.9 5 0 0 5 5 5 0 PPR repeat Ribonuc_L-PSP PF01042.21 gi|568163829|ref|YP_008947251.1| - 2.2e-41 140.7 0.0 2.4e-41 140.5 0.0 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP CBS PF00571.28 gi|568163830|ref|YP_008947252.1| - 1.9e-43 146.7 15.2 1.8e-14 53.9 0.1 4.1 4 0 0 4 4 4 4 CBS domain GDE_C PF06202.14 gi|568163831|ref|YP_008947253.1| - 8.8e-114 380.4 0.0 1.3e-113 379.9 0.0 1.2 1 0 0 1 1 1 1 Amylo-alpha-1,6-glucosidase GDE_N PF12439.8 gi|568163831|ref|YP_008947253.1| - 9.7e-55 185.3 0.6 1.4e-54 184.8 0.6 1.2 1 0 0 1 1 1 1 Glycogen debranching enzyme N terminal Bac_rhamnosid6H PF17389.2 gi|568163831|ref|YP_008947253.1| - 0.00011 21.6 0.0 0.00016 21.1 0.0 1.2 1 0 0 1 1 1 1 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain DUF608 PF04685.13 gi|568163831|ref|YP_008947253.1| - 0.03 13.5 0.1 0.062 12.5 0.1 1.4 1 0 0 1 1 1 0 Glycosyl-hydrolase family 116, catalytic region Glyco_hydro_15 PF00723.21 gi|568163832|ref|YP_008947254.1| - 3e-17 62.5 0.4 4.5e-13 48.8 0.9 3.2 1 1 1 2 2 2 2 Glycosyl hydrolases family 15 NTP_transferase PF00483.23 gi|568163833|ref|YP_008947255.1| - 9.9e-41 139.9 0.0 1.2e-40 139.6 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 gi|568163833|ref|YP_008947255.1| - 4.2e-06 26.2 8.2 0.086 12.6 0.2 4.5 2 1 3 5 5 5 4 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 gi|568163833|ref|YP_008947255.1| - 5.8e-05 23.5 0.0 0.00011 22.6 0.0 1.5 1 0 0 1 1 1 1 MobA-like NTP transferase domain DUF4954 PF16314.5 gi|568163833|ref|YP_008947255.1| - 0.00011 20.5 3.9 0.0003 19.1 3.8 1.7 1 1 0 1 1 1 1 Domain of unknown function (DUF4954) Fucokinase PF07959.12 gi|568163833|ref|YP_008947255.1| - 0.058 12.3 0.9 4.6 6.1 0.1 2.9 2 1 1 3 3 3 0 L-fucokinase Hexapep_2 PF14602.6 gi|568163833|ref|YP_008947255.1| - 0.68 9.7 3.7 8.8 6.2 0.0 3.0 2 1 1 3 3 3 0 Hexapeptide repeat of succinyl-transferase Glyco_hydro_57 PF03065.15 gi|568163834|ref|YP_008947256.1| - 2.6e-73 247.0 4.6 4.6e-73 246.2 4.6 1.3 1 0 0 1 1 1 1 Glycosyl hydrolase family 57 Glyco_transf_5 PF08323.11 gi|568163835|ref|YP_008947257.1| - 3.5e-31 108.8 0.3 6e-31 108.0 0.1 1.5 2 0 0 2 2 2 1 Starch synthase catalytic domain Glycos_transf_1 PF00534.20 gi|568163835|ref|YP_008947257.1| - 1.8e-27 95.9 0.0 3.5e-27 95.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|568163835|ref|YP_008947257.1| - 2.9e-22 79.6 0.0 5.6e-22 78.6 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|568163835|ref|YP_008947257.1| - 1.4e-09 38.2 4.1 2.3e-08 34.2 3.0 2.7 2 1 0 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|568163835|ref|YP_008947257.1| - 3.4e-06 27.6 0.2 4.6e-05 23.9 0.2 2.3 1 1 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 gi|568163835|ref|YP_008947257.1| - 0.018 15.5 0.0 0.18 12.2 0.0 2.2 1 1 0 1 1 1 0 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.6 gi|568163835|ref|YP_008947257.1| - 0.032 14.3 0.3 3.7 7.6 0.0 2.8 3 0 0 3 3 3 0 Glycosyl transferase 4-like Oxidored_molyb PF00174.19 gi|568163836|ref|YP_008947258.1| - 2.1e-37 128.3 0.0 2.6e-37 128.1 0.0 1.1 1 0 0 1 1 1 1 Oxidoreductase molybdopterin binding domain Cpn60_TCP1 PF00118.24 gi|568163837|ref|YP_008947259.1| - 1.7e-159 531.6 21.5 1.9e-159 531.4 21.5 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family WIYLD PF10440.9 gi|568163838|ref|YP_008947260.1| - 0.079 12.8 0.1 0.49 10.2 0.0 2.1 2 0 0 2 2 2 0 Ubiquitin-binding WIYLD domain Methyltransf_11 PF08241.12 gi|568163839|ref|YP_008947261.1| - 0.0017 18.9 0.1 0.0037 17.9 0.1 1.5 1 1 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|568163839|ref|YP_008947261.1| - 0.074 12.4 0.1 0.11 11.8 0.1 1.4 1 1 0 1 1 1 0 ubiE/COQ5 methyltransferase family CBS PF00571.28 gi|568163840|ref|YP_008947262.1| - 1.7e-18 66.8 0.1 3.7e-09 36.9 0.0 2.1 2 0 0 2 2 2 2 CBS domain AP_endonuc_2 PF01261.24 gi|568163840|ref|YP_008947262.1| - 0.021 14.3 0.0 0.024 14.1 0.0 1.1 1 0 0 1 1 1 0 Xylose isomerase-like TIM barrel DSBA PF01323.20 gi|568163841|ref|YP_008947263.1| - 1.8e-22 80.1 0.6 5.5e-22 78.5 0.6 1.7 1 1 0 1 1 1 1 DSBA-like thioredoxin domain Thioredoxin_5 PF13743.6 gi|568163841|ref|YP_008947263.1| - 8.9e-21 74.4 0.4 1.2e-20 74.0 0.4 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_4 PF13462.6 gi|568163841|ref|YP_008947263.1| - 5.2e-08 33.2 1.7 4.8e-06 26.8 0.0 2.1 1 1 1 2 2 2 2 Thioredoxin Thioredoxin_3 PF13192.6 gi|568163841|ref|YP_008947263.1| - 0.00022 21.2 0.1 0.0043 17.1 0.0 2.4 2 0 0 2 2 2 1 Thioredoxin domain Thioredoxin_2 PF13098.6 gi|568163841|ref|YP_008947263.1| - 0.00064 20.1 1.4 0.043 14.3 1.4 2.2 1 1 0 1 1 1 1 Thioredoxin-like domain ArnB_C PF18677.1 gi|568163842|ref|YP_008947264.1| - 1.3e-23 82.9 3.2 1.3e-23 82.9 2.0 1.6 2 0 0 2 2 2 1 Archaellum regulatory network B, C-terminal domain VWA PF00092.28 gi|568163842|ref|YP_008947264.1| - 2e-14 54.2 0.1 4e-14 53.2 0.1 1.5 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_3 PF13768.6 gi|568163842|ref|YP_008947264.1| - 1.7e-09 37.8 0.0 1.1e-08 35.2 0.0 2.0 1 1 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 gi|568163842|ref|YP_008947264.1| - 2.2e-07 31.5 0.0 4.5e-07 30.5 0.0 1.6 1 0 0 1 1 1 1 von Willebrand factor type A domain FHA PF00498.26 gi|568163843|ref|YP_008947265.1| - 1.5e-16 60.5 0.0 3.3e-16 59.4 0.0 1.5 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 gi|568163843|ref|YP_008947265.1| - 1.8e-09 37.8 0.0 3e-09 37.1 0.0 1.3 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain zinc_ribbon_2 PF13240.6 gi|568163843|ref|YP_008947265.1| - 1.8e-06 27.5 3.2 3e-06 26.8 3.2 1.4 1 0 0 1 1 1 1 zinc-ribbon domain zf-RanBP PF00641.18 gi|568163843|ref|YP_008947265.1| - 0.0014 17.9 1.6 0.0022 17.3 1.6 1.3 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others DZR PF12773.7 gi|568163843|ref|YP_008947265.1| - 0.0021 18.0 1.4 0.0035 17.3 1.4 1.4 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|568163843|ref|YP_008947265.1| - 0.029 13.8 1.1 0.049 13.1 1.1 1.4 1 0 0 1 1 1 0 zinc-ribbon domain A2L_zn_ribbon PF08792.10 gi|568163843|ref|YP_008947265.1| - 0.16 11.7 3.7 2.2 8.1 3.7 2.4 1 1 0 1 1 1 0 A2L zinc ribbon domain TFIIA PF03153.13 gi|568163843|ref|YP_008947265.1| - 2.5 8.0 10.7 3.2 7.7 10.7 1.1 1 0 0 1 1 1 0 Transcription factor IIA, alpha/beta subunit ArnB_C PF18677.1 gi|568163844|ref|YP_008947266.1| - 2.2e-27 94.9 11.3 2.6e-27 94.7 9.9 1.9 2 0 0 2 2 2 1 Archaellum regulatory network B, C-terminal domain VWA PF00092.28 gi|568163844|ref|YP_008947266.1| - 7.5e-18 65.4 0.1 2.7e-17 63.6 0.0 1.8 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA_2 PF13519.6 gi|568163844|ref|YP_008947266.1| - 7.8e-13 49.0 0.3 8.3e-12 45.7 0.0 2.4 2 1 0 2 2 2 1 von Willebrand factor type A domain VWA_3 PF13768.6 gi|568163844|ref|YP_008947266.1| - 7.9e-08 32.4 0.0 1.8e-07 31.2 0.0 1.6 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 gi|568163844|ref|YP_008947266.1| - 0.00019 20.9 0.0 0.00056 19.4 0.0 1.7 2 0 0 2 2 2 1 VWA domain containing CoxE-like protein MazE_antitoxin PF04014.18 gi|568163845|ref|YP_008947267.1| - 2.6e-07 30.4 0.5 3e-07 30.2 0.5 1.2 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin eIF-1a PF01176.19 gi|568163845|ref|YP_008947267.1| - 0.015 15.1 1.3 0.023 14.5 1.3 1.5 1 1 0 1 1 1 0 Translation initiation factor 1A / IF-1 PrlF_antitoxin PF15937.5 gi|568163845|ref|YP_008947267.1| - 0.024 15.1 0.1 0.029 14.8 0.1 1.1 1 0 0 1 1 1 0 prlF antitoxin for toxin YhaV_toxin DUF402 PF04167.13 gi|568163846|ref|YP_008947268.1| - 3.1e-14 52.9 2.2 8.4e-14 51.5 1.8 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF402) RNase_E_G PF10150.9 gi|568163846|ref|YP_008947268.1| - 0.043 13.2 0.0 0.076 12.4 0.0 1.5 1 0 0 1 1 1 0 Ribonuclease E/G family ATPase PF06745.13 gi|568163846|ref|YP_008947268.1| - 0.059 12.7 0.1 0.87 8.9 0.0 2.1 2 0 0 2 2 2 0 KaiC Aconitase PF00330.20 gi|568163847|ref|YP_008947269.1| - 9.8e-163 542.4 0.0 1.3e-162 542.0 0.0 1.1 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_C PF00694.19 gi|568163847|ref|YP_008947269.1| - 7.2e-36 123.4 0.0 1.6e-35 122.3 0.0 1.5 1 0 0 1 1 1 1 Aconitase C-terminal domain Cas_DxTHG PF09455.10 gi|568164859|ref|YP_008947270.1| - 1.4e-24 87.3 7.1 2.3e-24 86.7 7.1 1.3 1 0 0 1 1 1 1 CRISPR-associated (Cas) DxTHG family DUF2258 PF10015.9 gi|568163848|ref|YP_008947271.1| - 2.6e-24 85.1 2.8 2.6e-24 85.1 2.8 1.9 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2258) TMF_DNA_bd PF12329.8 gi|568163848|ref|YP_008947271.1| - 0.0046 16.9 5.4 0.0046 16.9 5.4 2.3 3 0 0 3 3 2 1 TATA element modulatory factor 1 DNA binding DASH_Duo1 PF08651.10 gi|568163848|ref|YP_008947271.1| - 0.017 14.9 0.7 0.047 13.5 0.6 1.8 2 0 0 2 2 2 0 DASH complex subunit Duo1 Spectrin PF00435.21 gi|568163848|ref|YP_008947271.1| - 0.019 15.4 2.4 0.023 15.2 1.0 1.9 2 0 0 2 2 2 0 Spectrin repeat NPV_P10 PF05531.12 gi|568163848|ref|YP_008947271.1| - 0.025 15.1 2.7 0.093 13.2 0.4 2.2 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein SOAR PF16533.5 gi|568163848|ref|YP_008947271.1| - 0.029 14.3 2.2 0.047 13.7 1.3 1.9 1 1 1 2 2 2 0 STIM1 Orai1-activating region LPP PF04728.13 gi|568163848|ref|YP_008947271.1| - 0.076 13.4 1.2 0.42 11.0 0.3 2.2 2 0 0 2 2 2 0 Lipoprotein leucine-zipper AAA_11 PF13086.6 gi|568163848|ref|YP_008947271.1| - 0.083 12.7 1.5 0.093 12.5 1.5 1.2 1 0 0 1 1 1 0 AAA domain DUF4140 PF13600.6 gi|568163848|ref|YP_008947271.1| - 0.13 12.7 1.4 0.29 11.6 1.4 1.8 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) Bcr-Abl_Oligo PF09036.10 gi|568163848|ref|YP_008947271.1| - 0.15 12.1 1.5 0.53 10.3 0.7 2.2 1 1 1 2 2 2 0 Bcr-Abl oncoprotein oligomerisation domain BRICHOS PF04089.14 gi|568163848|ref|YP_008947271.1| - 0.15 12.3 0.3 8.1 6.8 0.2 2.2 1 1 1 2 2 2 0 BRICHOS domain DASH_Dad4 PF08650.10 gi|568163848|ref|YP_008947271.1| - 0.28 11.2 4.3 0.8 9.7 1.0 2.3 2 0 0 2 2 2 0 DASH complex subunit Dad4 AAA_23 PF13476.6 gi|568163848|ref|YP_008947271.1| - 0.82 10.1 10.7 1 9.8 10.7 1.2 1 1 0 1 1 1 0 AAA domain Myb_DNA-bind_4 PF13837.6 gi|568163848|ref|YP_008947271.1| - 0.9 10.0 4.5 3.2 8.2 1.9 2.3 1 1 1 2 2 2 0 Myb/SANT-like DNA-binding domain HDV_ag PF01517.18 gi|568163848|ref|YP_008947271.1| - 1.8 8.4 4.1 1.9 8.2 1.4 2.0 2 1 0 2 2 2 0 Hepatitis delta virus delta antigen DHHA1 PF02272.19 gi|568163848|ref|YP_008947271.1| - 4.2 7.8 10.9 0.31 11.4 2.0 2.7 2 1 0 2 2 2 0 DHHA1 domain Pox_A_type_inc PF04508.12 gi|568163848|ref|YP_008947271.1| - 7.1 6.7 8.5 0.94 9.4 0.8 3.1 2 1 1 3 3 3 0 Viral A-type inclusion protein repeat MtrC PF04211.13 gi|568163849|ref|YP_008947272.1| - 0.053 12.6 14.7 0.083 11.9 13.0 1.8 1 1 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, subunit C DUF1275 PF06912.11 gi|568163849|ref|YP_008947272.1| - 0.099 12.6 7.2 0.16 11.9 7.2 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1275) PrgI PF12666.7 gi|568163849|ref|YP_008947272.1| - 0.33 11.7 7.2 0.29 11.9 6.3 1.4 1 1 0 1 1 1 0 PrgI family protein CBP_BcsG PF11658.8 gi|568163849|ref|YP_008947272.1| - 0.69 8.2 2.2 0.77 8.1 2.2 1.1 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsG FUN14 PF04930.15 gi|568163849|ref|YP_008947272.1| - 0.79 10.2 11.1 15 6.1 11.1 2.2 1 1 0 1 1 1 0 FUN14 family SPC12 PF06645.13 gi|568163849|ref|YP_008947272.1| - 0.95 9.6 11.9 0.89 9.7 7.5 2.2 2 0 0 2 2 2 0 Microsomal signal peptidase 12 kDa subunit (SPC12) DUF4389 PF14333.6 gi|568163849|ref|YP_008947272.1| - 2.9 7.9 10.3 1.1 9.2 6.0 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4389) DUF3487 PF11990.8 gi|568163849|ref|YP_008947272.1| - 6.9 6.6 12.3 1.5 8.7 8.9 1.7 1 1 0 2 2 2 0 Protein of unknown function (DUF3487) FtsX PF02687.21 gi|568163849|ref|YP_008947272.1| - 7.7 7.1 16.8 8.8e+02 0.5 16.8 2.3 1 1 0 1 1 1 0 FtsX-like permease family Promethin PF16015.5 gi|568163849|ref|YP_008947272.1| - 9.1 6.3 12.3 6.5 6.7 9.6 1.8 1 1 1 2 2 2 0 Promethin TrmB PF01978.19 gi|568163851|ref|YP_008947274.1| - 2.2e-10 40.3 0.4 3.3e-10 39.7 0.4 1.4 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.17 gi|568163851|ref|YP_008947274.1| - 2.6e-09 36.9 1.6 3.1e-09 36.6 1.6 1.1 1 0 0 1 1 1 1 TFIIE alpha subunit MarR_2 PF12802.7 gi|568163851|ref|YP_008947274.1| - 6.6e-08 32.3 0.0 1.4e-07 31.3 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|568163851|ref|YP_008947274.1| - 3.3e-06 26.6 0.3 5.8e-06 25.8 0.3 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|568163851|ref|YP_008947274.1| - 5.9e-06 26.1 0.3 1.2e-05 25.1 0.1 1.6 2 0 0 2 2 2 1 MarR family HTH_11 PF08279.12 gi|568163851|ref|YP_008947274.1| - 5.1e-05 23.1 1.4 0.00011 22.0 0.3 1.9 2 0 0 2 2 2 1 HTH domain HTH_20 PF12840.7 gi|568163851|ref|YP_008947274.1| - 0.00011 22.1 0.1 0.0011 19.0 0.0 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|568163851|ref|YP_008947274.1| - 0.00017 21.3 0.1 0.00034 20.4 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_DeoR PF08220.12 gi|568163851|ref|YP_008947274.1| - 0.0002 21.0 0.7 0.00051 19.7 0.2 1.8 2 0 0 2 2 2 1 DeoR-like helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|568163851|ref|YP_008947274.1| - 0.00023 21.0 0.0 0.00038 20.4 0.0 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain GntR PF00392.21 gi|568163851|ref|YP_008947274.1| - 0.00029 20.4 1.1 0.0022 17.6 0.0 2.2 2 1 0 2 2 2 1 Bacterial regulatory proteins, gntR family Fe_dep_repress PF01325.19 gi|568163851|ref|YP_008947274.1| - 0.00052 20.2 0.1 0.0012 18.9 0.1 1.7 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_27 PF13463.6 gi|568163851|ref|YP_008947274.1| - 0.00076 19.9 0.1 0.0012 19.3 0.1 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain CvfB_WH PF17783.1 gi|568163851|ref|YP_008947274.1| - 0.0036 17.1 0.1 0.0074 16.1 0.1 1.6 1 0 0 1 1 1 1 CvfB-like winged helix domain TBPIP PF07106.13 gi|568163851|ref|YP_008947274.1| - 0.0068 16.3 0.2 0.015 15.2 0.2 1.5 1 0 0 1 1 1 1 TBPIP/Hop2 winged helix domain Rrf2 PF02082.20 gi|568163851|ref|YP_008947274.1| - 0.007 16.7 0.1 0.012 15.9 0.1 1.4 1 0 0 1 1 1 1 Transcriptional regulator HTH_Mga PF08280.11 gi|568163851|ref|YP_008947274.1| - 0.0076 16.3 0.1 0.016 15.2 0.1 1.5 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain HTH_6 PF01418.17 gi|568163851|ref|YP_008947274.1| - 0.0096 15.9 0.4 0.017 15.1 0.1 1.6 2 0 0 2 2 1 1 Helix-turn-helix domain, rpiR family Penicillinase_R PF03965.16 gi|568163851|ref|YP_008947274.1| - 0.019 15.3 0.1 0.035 14.5 0.0 1.6 2 0 0 2 2 1 0 Penicillinase repressor HTH_36 PF13730.6 gi|568163851|ref|YP_008947274.1| - 0.019 14.9 0.4 0.068 13.1 0.1 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain DUF4423 PF14394.6 gi|568163851|ref|YP_008947274.1| - 0.021 14.5 1.1 0.027 14.2 0.1 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4423) GerE PF00196.19 gi|568163851|ref|YP_008947274.1| - 0.022 14.3 0.0 0.043 13.4 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family FeoC PF09012.10 gi|568163851|ref|YP_008947274.1| - 0.025 14.6 0.1 0.048 13.7 0.1 1.4 1 0 0 1 1 1 0 FeoC like transcriptional regulator RuvB_C PF05491.13 gi|568163851|ref|YP_008947274.1| - 0.031 14.1 0.2 0.072 13.0 0.1 1.6 2 0 0 2 2 2 0 RuvB C-terminal winged helix domain RTP PF02334.16 gi|568163851|ref|YP_008947274.1| - 0.035 14.7 0.8 0.045 14.4 0.8 1.3 1 0 0 1 1 1 0 Replication terminator protein HTH_IclR PF09339.10 gi|568163851|ref|YP_008947274.1| - 0.036 13.9 0.0 0.068 13.0 0.0 1.5 2 0 0 2 2 1 0 IclR helix-turn-helix domain HTH_34 PF13601.6 gi|568163851|ref|YP_008947274.1| - 0.036 14.2 0.3 0.071 13.3 0.1 1.6 2 0 0 2 2 1 0 Winged helix DNA-binding domain Pigment_DH PF06324.11 gi|568163851|ref|YP_008947274.1| - 0.04 14.0 0.1 0.085 13.0 0.1 1.6 1 0 0 1 1 1 0 Pigment-dispersing hormone (PDH) HTH_10 PF04967.12 gi|568163851|ref|YP_008947274.1| - 0.083 12.7 0.1 0.17 11.7 0.1 1.5 1 0 0 1 1 1 0 HTH DNA binding domain Nas2_N PF18265.1 gi|568163851|ref|YP_008947274.1| - 0.1 12.5 0.6 3.7 7.5 0.0 2.5 2 1 0 2 2 2 0 Nas2 N_terminal domain HDV_ag PF01517.18 gi|568163851|ref|YP_008947274.1| - 0.17 11.6 1.5 0.22 11.3 0.9 1.5 1 1 0 1 1 1 0 Hepatitis delta virus delta antigen Put_DNA-bind_N PF06971.13 gi|568163851|ref|YP_008947274.1| - 0.41 10.7 2.5 1 9.4 0.5 2.2 2 0 0 2 2 2 0 Putative DNA-binding protein N-terminus Peripla_BP_2 PF01497.18 gi|568163852|ref|YP_008947275.1| - 6.5e-19 68.4 0.4 9.9e-19 67.8 0.4 1.2 1 0 0 1 1 1 1 Periplasmic binding protein FecCD PF01032.18 gi|568163853|ref|YP_008947276.1| - 3.1e-62 210.4 36.6 3.8e-62 210.1 36.6 1.0 1 0 0 1 1 1 1 FecCD transport family ABC-3 PF00950.17 gi|568163853|ref|YP_008947276.1| - 4.1e-06 26.5 26.1 6e-06 25.9 26.1 1.3 1 0 0 1 1 1 1 ABC 3 transport family ABC_tran PF00005.27 gi|568163854|ref|YP_008947277.1| - 1.2e-18 67.9 0.2 1.3e-17 64.6 0.2 2.1 1 1 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|568163854|ref|YP_008947277.1| - 5.6e-13 48.8 4.2 4.3e-06 26.3 0.8 2.1 1 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|568163854|ref|YP_008947277.1| - 7.8e-13 48.9 1.2 2.5e-05 24.2 0.4 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|568163854|ref|YP_008947277.1| - 2.9e-08 34.5 3.0 1.3e-07 32.4 3.0 1.9 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|568163854|ref|YP_008947277.1| - 9.7e-08 32.1 3.8 7.4e-05 22.6 0.3 2.2 1 1 1 2 2 2 2 AAA ATPase domain Adeno_IVa2 PF02456.15 gi|568163854|ref|YP_008947277.1| - 3e-06 26.3 0.1 4e-06 25.9 0.1 1.1 1 0 0 1 1 1 1 Adenovirus IVa2 protein AAA_29 PF13555.6 gi|568163854|ref|YP_008947277.1| - 4.6e-05 23.1 0.1 0.0001 21.9 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain cobW PF02492.19 gi|568163854|ref|YP_008947277.1| - 0.00012 21.7 1.9 0.00032 20.3 1.9 2.0 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain ATPase_2 PF01637.18 gi|568163854|ref|YP_008947277.1| - 0.00032 20.7 0.9 0.00046 20.2 0.9 1.3 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_22 PF13401.6 gi|568163854|ref|YP_008947277.1| - 0.00062 20.1 0.0 0.0009 19.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain T2SSE PF00437.20 gi|568163854|ref|YP_008947277.1| - 0.0038 16.3 0.1 0.0065 15.6 0.1 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein RsgA_GTPase PF03193.16 gi|568163854|ref|YP_008947277.1| - 0.004 17.1 0.2 0.0089 15.9 0.2 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_30 PF13604.6 gi|568163854|ref|YP_008947277.1| - 0.0044 16.8 0.2 0.0073 16.0 0.2 1.5 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.6 gi|568163854|ref|YP_008947277.1| - 0.0071 16.7 0.8 0.018 15.4 0.8 1.9 1 1 0 1 1 1 1 AAA domain NACHT PF05729.12 gi|568163854|ref|YP_008947277.1| - 0.0098 15.8 0.2 0.024 14.6 0.2 1.5 1 0 0 1 1 1 1 NACHT domain AAA_14 PF13173.6 gi|568163854|ref|YP_008947277.1| - 0.011 15.8 0.8 0.046 13.8 0.8 2.2 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|568163854|ref|YP_008947277.1| - 0.012 16.0 0.1 0.022 15.1 0.1 1.7 1 1 0 1 1 1 0 AAA ATPase domain FtsK_SpoIIIE PF01580.18 gi|568163854|ref|YP_008947277.1| - 0.014 14.8 2.1 0.026 13.9 0.6 1.9 2 0 0 2 2 2 0 FtsK/SpoIIIE family ABC_ATPase PF09818.9 gi|568163854|ref|YP_008947277.1| - 0.018 13.8 0.1 0.037 12.8 0.1 1.4 1 0 0 1 1 1 0 Predicted ATPase of the ABC class NTPase_1 PF03266.15 gi|568163854|ref|YP_008947277.1| - 0.021 14.7 4.6 0.42 10.5 0.4 2.3 2 0 0 2 2 2 0 NTPase AAA_24 PF13479.6 gi|568163854|ref|YP_008947277.1| - 0.021 14.5 0.2 0.15 11.8 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 gi|568163854|ref|YP_008947277.1| - 0.028 14.9 3.1 1.3 9.5 3.1 2.5 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 gi|568163854|ref|YP_008947277.1| - 0.035 14.5 0.3 0.081 13.4 0.2 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 gi|568163854|ref|YP_008947277.1| - 0.05 13.8 0.0 0.095 12.9 0.0 1.6 1 1 0 1 1 1 0 AAA domain TrwB_AAD_bind PF10412.9 gi|568163854|ref|YP_008947277.1| - 0.057 12.3 0.0 0.09 11.7 0.0 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain MobB PF03205.14 gi|568163854|ref|YP_008947277.1| - 0.061 13.2 0.6 0.19 11.6 0.2 2.0 1 1 1 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B MMR_HSR1 PF01926.23 gi|568163854|ref|YP_008947277.1| - 0.079 13.0 0.2 0.13 12.4 0.2 1.6 1 1 0 1 1 1 0 50S ribosome-binding GTPase DUF3584 PF12128.8 gi|568163854|ref|YP_008947277.1| - 0.094 10.2 0.3 0.12 9.8 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) NB-ARC PF00931.22 gi|568163854|ref|YP_008947277.1| - 0.095 11.9 0.6 0.17 11.0 0.1 1.6 2 0 0 2 2 2 0 NB-ARC domain RNA_helicase PF00910.22 gi|568163854|ref|YP_008947277.1| - 0.095 13.1 0.2 0.36 11.3 0.1 2.0 2 1 0 2 2 2 0 RNA helicase AAA_5 PF07728.14 gi|568163854|ref|YP_008947277.1| - 0.16 12.0 0.4 0.75 9.8 0.4 2.1 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) SRP54 PF00448.22 gi|568163854|ref|YP_008947277.1| - 0.2 11.2 2.1 1.2 8.8 0.3 2.5 1 1 1 2 2 2 0 SRP54-type protein, GTPase domain SbcCD_C PF13558.6 gi|568163854|ref|YP_008947277.1| - 0.2 11.9 0.1 1.6 9.1 0.1 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit IstB_IS21 PF01695.17 gi|568163854|ref|YP_008947277.1| - 0.23 11.2 0.9 8.9 6.0 0.1 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein TrmB PF01978.19 gi|568163855|ref|YP_008947278.1| - 5.6e-11 42.2 1.1 9.9e-11 41.4 1.1 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|568163855|ref|YP_008947278.1| - 1.3e-08 34.6 0.0 2e-08 34.0 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_DeoR PF08220.12 gi|568163855|ref|YP_008947278.1| - 8.5e-08 31.8 0.5 7.6e-07 28.8 0.1 2.2 2 0 0 2 2 2 1 DeoR-like helix-turn-helix domain MarR PF01047.22 gi|568163855|ref|YP_008947278.1| - 4e-07 29.9 0.1 7.1e-07 29.1 0.1 1.4 1 0 0 1 1 1 1 MarR family TFIIE_alpha PF02002.17 gi|568163855|ref|YP_008947278.1| - 4.4e-07 29.7 3.2 5.7e-07 29.4 3.2 1.1 1 0 0 1 1 1 1 TFIIE alpha subunit GntR PF00392.21 gi|568163855|ref|YP_008947278.1| - 1.2e-06 28.0 0.6 2.2e-06 27.2 0.1 1.6 2 0 0 2 2 1 1 Bacterial regulatory proteins, gntR family Fe_dep_repress PF01325.19 gi|568163855|ref|YP_008947278.1| - 2.2e-06 27.8 0.6 0.00012 22.2 0.6 2.4 1 1 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_27 PF13463.6 gi|568163855|ref|YP_008947278.1| - 1.1e-05 25.8 0.2 4e-05 24.0 0.0 1.8 2 0 0 2 2 2 1 Winged helix DNA-binding domain Rrf2 PF02082.20 gi|568163855|ref|YP_008947278.1| - 3.9e-05 23.9 0.1 6.6e-05 23.2 0.1 1.4 1 0 0 1 1 1 1 Transcriptional regulator HTH_24 PF13412.6 gi|568163855|ref|YP_008947278.1| - 4.4e-05 22.9 0.3 7.6e-05 22.2 0.3 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|568163855|ref|YP_008947278.1| - 5e-05 23.1 0.1 8.4e-05 22.4 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 gi|568163855|ref|YP_008947278.1| - 0.00011 22.0 1.0 0.00027 20.8 0.3 2.0 2 0 0 2 2 2 1 HTH domain HTH_34 PF13601.6 gi|568163855|ref|YP_008947278.1| - 0.00023 21.3 0.3 0.0004 20.5 0.2 1.5 1 1 0 1 1 1 1 Winged helix DNA-binding domain RTP PF02334.16 gi|568163855|ref|YP_008947278.1| - 0.00061 20.4 0.3 0.0011 19.6 0.2 1.4 1 1 0 1 1 1 1 Replication terminator protein HTH_Crp_2 PF13545.6 gi|568163855|ref|YP_008947278.1| - 0.00065 19.6 0.1 0.0012 18.8 0.0 1.6 2 0 0 2 2 1 1 Crp-like helix-turn-helix domain UPF0122 PF04297.14 gi|568163855|ref|YP_008947278.1| - 0.0016 18.6 3.6 0.018 15.2 3.6 2.1 1 1 0 1 1 1 1 Putative helix-turn-helix protein, YlxM / p13 like HxlR PF01638.17 gi|568163855|ref|YP_008947278.1| - 0.0024 17.7 0.2 0.0036 17.1 0.2 1.4 1 1 0 1 1 1 1 HxlR-like helix-turn-helix HTH_20 PF12840.7 gi|568163855|ref|YP_008947278.1| - 0.0032 17.5 0.0 0.0057 16.7 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain Cullin_Nedd8 PF10557.9 gi|568163855|ref|YP_008947278.1| - 0.004 17.1 3.1 0.029 14.4 0.1 2.8 3 0 0 3 3 3 1 Cullin protein neddylation domain HTH_36 PF13730.6 gi|568163855|ref|YP_008947278.1| - 0.014 15.3 0.7 0.063 13.3 0.1 2.2 2 1 1 3 3 3 0 Helix-turn-helix domain Sigma70_r4 PF04545.16 gi|568163855|ref|YP_008947278.1| - 0.018 14.6 0.2 0.062 12.8 0.1 2.0 2 1 1 3 3 2 0 Sigma-70, region 4 FeoC PF09012.10 gi|568163855|ref|YP_008947278.1| - 0.021 14.9 0.0 0.071 13.2 0.0 1.8 2 0 0 2 2 2 0 FeoC like transcriptional regulator DUF4423 PF14394.6 gi|568163855|ref|YP_008947278.1| - 0.021 14.5 0.9 0.03 14.0 0.9 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_41 PF14502.6 gi|568163855|ref|YP_008947278.1| - 0.026 14.2 0.8 0.08 12.6 0.1 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain HemN_C PF06969.16 gi|568163855|ref|YP_008947278.1| - 0.037 14.1 0.3 0.69 10.0 0.0 2.2 2 0 0 2 2 2 0 HemN C-terminal domain PadR PF03551.14 gi|568163855|ref|YP_008947278.1| - 0.041 13.8 0.1 0.085 12.8 0.1 1.5 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family B-block_TFIIIC PF04182.12 gi|568163855|ref|YP_008947278.1| - 0.043 14.0 0.0 0.083 13.1 0.0 1.6 1 1 0 1 1 1 0 B-block binding subunit of TFIIIC Cdc6_C PF09079.11 gi|568163855|ref|YP_008947278.1| - 0.043 13.8 0.0 0.066 13.2 0.0 1.4 1 0 0 1 1 1 0 CDC6, C terminal winged helix domain DUF3920 PF13058.6 gi|568163855|ref|YP_008947278.1| - 0.05 13.8 0.9 0.091 13.0 0.2 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF3920) Mga PF05043.13 gi|568163855|ref|YP_008947278.1| - 0.07 13.7 3.1 0.072 13.7 1.1 2.0 2 1 0 2 2 2 0 Mga helix-turn-helix domain HTH_38 PF13936.6 gi|568163855|ref|YP_008947278.1| - 0.081 12.7 0.6 0.32 10.8 0.0 2.3 3 0 0 3 3 2 0 Helix-turn-helix domain HTH_9 PF08221.11 gi|568163855|ref|YP_008947278.1| - 0.083 13.0 0.1 0.21 11.7 0.0 1.7 2 0 0 2 2 2 0 RNA polymerase III subunit RPC82 helix-turn-helix domain LexA_DNA_bind PF01726.16 gi|568163855|ref|YP_008947278.1| - 0.088 12.6 0.1 0.17 11.7 0.1 1.4 1 0 0 1 1 1 0 LexA DNA binding domain TetR_N PF00440.23 gi|568163855|ref|YP_008947278.1| - 0.1 12.4 0.0 8.5 6.3 0.0 2.4 2 0 0 2 2 2 0 Bacterial regulatory proteins, tetR family MRP-L20 PF12824.7 gi|568163855|ref|YP_008947278.1| - 0.1 12.8 0.1 0.13 12.4 0.1 1.2 1 0 0 1 1 1 0 Mitochondrial ribosomal protein subunit L20 TBPIP PF07106.13 gi|568163855|ref|YP_008947278.1| - 0.11 12.4 1.6 0.67 9.9 0.1 2.6 3 0 0 3 3 3 0 TBPIP/Hop2 winged helix domain HTH_47 PF16221.5 gi|568163855|ref|YP_008947278.1| - 0.12 12.0 0.0 0.26 10.9 0.0 1.5 1 1 0 1 1 1 0 winged helix-turn-helix Homeodomain PF00046.29 gi|568163855|ref|YP_008947278.1| - 0.2 11.5 1.9 0.83 9.6 0.1 2.4 3 0 0 3 3 2 0 Homeodomain LSM PF01423.22 gi|568163856|ref|YP_008947279.1| - 5e-24 83.8 0.9 5.5e-24 83.6 0.9 1.0 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.6 gi|568163856|ref|YP_008947279.1| - 0.00041 20.4 0.2 0.00048 20.2 0.2 1.1 1 0 0 1 1 1 1 Ataxin 2 SM domain Fur_reg_FbpB PF13040.6 gi|568163856|ref|YP_008947279.1| - 0.15 11.6 0.0 0.23 11.1 0.0 1.2 1 0 0 1 1 1 0 Fur-regulated basic protein B DUF469 PF04320.14 gi|568164860|ref|YP_008947281.1| - 0.062 14.2 0.2 0.45 11.4 0.1 2.0 2 0 0 2 2 2 0 Protein with unknown function (DUF469) FAD_binding_7 PF03441.14 gi|568163858|ref|YP_008947282.1| - 7.7e-66 221.4 2.1 1.2e-65 220.8 2.1 1.3 1 0 0 1 1 1 1 FAD binding domain of DNA photolyase DNA_photolyase PF00875.18 gi|568163858|ref|YP_008947282.1| - 9.5e-27 94.0 0.0 9.5e-26 90.7 0.0 2.1 2 0 0 2 2 2 1 DNA photolyase AAA_22 PF13401.6 gi|568163859|ref|YP_008947283.1| - 0.0006 20.1 0.3 0.0026 18.0 0.0 2.1 3 0 0 3 3 3 1 AAA domain AAA_30 PF13604.6 gi|568163859|ref|YP_008947283.1| - 0.004 16.9 0.0 0.0089 15.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 gi|568163859|ref|YP_008947283.1| - 0.0051 17.1 0.6 0.045 14.1 0.6 2.3 1 1 0 1 1 1 1 AAA domain ABC_tran PF00005.27 gi|568163859|ref|YP_008947283.1| - 0.0093 16.5 0.4 0.1 13.1 0.0 2.3 2 0 0 2 2 2 1 ABC transporter NTPase_1 PF03266.15 gi|568163859|ref|YP_008947283.1| - 0.011 15.6 1.2 0.028 14.3 0.2 2.1 2 0 0 2 2 2 0 NTPase AAA_16 PF13191.6 gi|568163859|ref|YP_008947283.1| - 0.019 15.3 0.0 0.05 14.0 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain NB-ARC PF00931.22 gi|568163859|ref|YP_008947283.1| - 0.023 13.9 0.0 0.053 12.7 0.0 1.6 1 0 0 1 1 1 0 NB-ARC domain MCM PF00493.23 gi|568163859|ref|YP_008947283.1| - 0.025 13.7 0.0 0.048 12.7 0.0 1.4 1 0 0 1 1 1 0 MCM P-loop domain AAA_24 PF13479.6 gi|568163859|ref|YP_008947283.1| - 0.031 14.0 0.1 0.066 12.9 0.1 1.5 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 gi|568163859|ref|YP_008947283.1| - 0.054 13.0 0.5 0.17 11.4 0.0 2.1 2 0 0 2 2 2 0 P-loop containing dynein motor region NACHT PF05729.12 gi|568163859|ref|YP_008947283.1| - 0.073 13.0 0.0 0.28 11.1 0.0 1.9 2 0 0 2 2 2 0 NACHT domain AAA PF00004.29 gi|568163859|ref|YP_008947283.1| - 0.1 13.0 1.0 0.51 10.8 1.0 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_17 PF13207.6 gi|568163859|ref|YP_008947283.1| - 0.1 13.0 0.3 0.43 11.0 0.0 2.2 2 0 0 2 2 2 0 AAA domain DUF4222 PF13973.6 gi|568163859|ref|YP_008947283.1| - 0.11 12.1 0.1 0.29 10.8 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4222) BORCS8 PF10167.9 gi|568163859|ref|YP_008947283.1| - 0.12 12.3 0.4 0.27 11.2 0.4 1.5 1 0 0 1 1 1 0 BLOC-1-related complex sub-unit 8 MRFAP1 PF15155.6 gi|568163859|ref|YP_008947283.1| - 0.15 12.6 0.2 19 5.8 0.0 2.4 1 1 1 2 2 2 0 MORF4 family-associated protein1 Img2 PF05046.14 gi|568163859|ref|YP_008947283.1| - 1.5 9.2 5.6 5.8 7.3 0.1 3.3 3 1 1 4 4 3 0 Mitochondrial large subunit ribosomal protein (Img2) MarR PF01047.22 gi|568163860|ref|YP_008947284.1| - 0.0082 16.0 0.0 0.018 15.0 0.0 1.5 1 0 0 1 1 1 1 MarR family Rrf2 PF02082.20 gi|568163860|ref|YP_008947284.1| - 0.031 14.6 0.0 0.05 13.9 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator TehB PF03848.14 gi|568163860|ref|YP_008947284.1| - 0.032 13.6 0.3 0.06 12.8 0.2 1.5 1 1 0 1 1 1 0 Tellurite resistance protein TehB HTH_15 PF12324.8 gi|568163860|ref|YP_008947284.1| - 0.052 13.5 0.0 0.11 12.4 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain of alkylmercury lyase MarR_2 PF12802.7 gi|568163860|ref|YP_008947284.1| - 0.1 12.5 0.0 0.25 11.2 0.0 1.6 1 0 0 1 1 1 0 MarR family z-alpha PF02295.17 gi|568163860|ref|YP_008947284.1| - 0.2 11.8 1.4 0.34 11.0 0.1 2.0 3 0 0 3 3 3 0 Adenosine deaminase z-alpha domain TENA_THI-4 PF03070.16 gi|568163861|ref|YP_008947285.1| - 5.9e-39 134.1 0.6 6.7e-39 133.9 0.6 1.0 1 0 0 1 1 1 1 TENA/THI-4/PQQC family PTB PF08416.13 gi|568163861|ref|YP_008947285.1| - 0.021 15.0 0.1 0.91 9.7 0.0 2.1 2 0 0 2 2 2 0 Phosphotyrosine-binding domain GT87 PF09594.10 gi|568164861|ref|YP_008947286.1| - 0.0012 18.7 5.5 0.0012 18.7 5.5 3.3 3 0 0 3 3 3 1 Glycosyltransferase family 87 adh_short_C2 PF13561.6 gi|568163862|ref|YP_008947287.1| - 9.8e-62 208.6 0.8 1.1e-61 208.4 0.8 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|568163862|ref|YP_008947287.1| - 3.1e-54 183.4 1.2 3.9e-54 183.1 1.2 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|568163862|ref|YP_008947287.1| - 3.1e-10 40.3 0.2 4.9e-10 39.6 0.2 1.4 1 0 0 1 1 1 1 KR domain Polysacc_synt_2 PF02719.15 gi|568163862|ref|YP_008947287.1| - 0.02 14.1 0.2 0.028 13.6 0.2 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein Methyltr_RsmB-F PF01189.17 gi|568163862|ref|YP_008947287.1| - 0.044 13.4 0.0 0.062 12.9 0.0 1.2 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F Epimerase PF01370.21 gi|568163862|ref|YP_008947287.1| - 0.15 11.5 0.3 0.78 9.1 0.3 2.1 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family betaPIX_CC PF16523.5 gi|568163862|ref|YP_008947287.1| - 0.21 11.4 0.7 0.35 10.7 0.7 1.3 1 0 0 1 1 1 0 betaPIX coiled coil DUF488 PF04343.13 gi|568164862|ref|YP_008947288.1| - 0.00054 20.5 0.0 0.00056 20.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function, DUF488 Cupin_2 PF07883.11 gi|568163863|ref|YP_008947289.1| - 8.1e-19 67.1 0.2 1.3e-18 66.5 0.2 1.3 1 0 0 1 1 1 1 Cupin domain MannoseP_isomer PF01050.18 gi|568163863|ref|YP_008947289.1| - 3.5e-07 30.2 0.1 4.1e-07 30.0 0.1 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Auxin_BP PF02041.16 gi|568163863|ref|YP_008947289.1| - 4.3e-07 29.7 0.0 1.2e-06 28.3 0.0 1.7 1 1 0 1 1 1 1 Auxin binding protein AraC_binding PF02311.19 gi|568163863|ref|YP_008947289.1| - 1.5e-06 28.2 0.0 1.8e-06 27.9 0.0 1.1 1 0 0 1 1 1 1 AraC-like ligand binding domain DMSP_lyase PF16867.5 gi|568163863|ref|YP_008947289.1| - 4.6e-05 23.1 0.0 5.9e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Dimethlysulfonioproprionate lyase Cupin_3 PF05899.12 gi|568163863|ref|YP_008947289.1| - 0.0015 18.2 0.1 0.012 15.3 0.0 2.0 1 1 1 2 2 2 1 Protein of unknown function (DUF861) Ectoine_synth PF06339.12 gi|568163863|ref|YP_008947289.1| - 0.0044 17.2 0.0 0.0058 16.8 0.0 1.1 1 0 0 1 1 1 1 Ectoine synthase Cupin_1 PF00190.22 gi|568163863|ref|YP_008947289.1| - 0.016 14.8 0.0 0.028 14.0 0.0 1.4 1 1 0 1 1 1 0 Cupin RuvA_N PF01330.21 gi|568163863|ref|YP_008947289.1| - 0.073 13.2 0.1 0.13 12.4 0.1 1.5 1 0 0 1 1 1 0 RuvA N terminal domain VAPB_antitox PF02697.14 gi|568163864|ref|YP_008947290.1| - 0.0059 17.3 6.9 0.035 14.9 6.9 2.0 1 1 0 1 1 1 1 Putative antitoxin Tail_P2_I PF09684.10 gi|568163864|ref|YP_008947290.1| - 0.028 14.4 0.0 0.057 13.4 0.0 1.4 1 1 0 1 1 1 0 Phage tail protein (Tail_P2_I) Fib_alpha PF08702.10 gi|568163864|ref|YP_008947290.1| - 0.048 13.9 0.5 0.051 13.8 0.5 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family LAGLIDADG_3 PF14528.6 gi|568163864|ref|YP_008947290.1| - 0.082 13.2 0.1 0.1 13.0 0.1 1.4 1 1 0 1 1 1 0 LAGLIDADG-like domain SAPIS-gp6 PF16722.5 gi|568163864|ref|YP_008947290.1| - 0.087 13.2 1.4 0.12 12.7 0.2 1.8 1 1 0 2 2 2 0 Pathogenicity island protein gp6 in Staphylococcus PIN PF01850.21 gi|568163865|ref|YP_008947291.1| - 3.2e-12 47.0 0.1 3.9e-12 46.8 0.1 1.1 1 0 0 1 1 1 1 PIN domain PIN_3 PF13470.6 gi|568163865|ref|YP_008947291.1| - 9.4e-05 23.2 0.0 0.00012 22.8 0.0 1.3 1 1 0 1 1 1 1 PIN domain PIN_12 PF16289.5 gi|568163865|ref|YP_008947291.1| - 0.026 15.0 0.8 0.036 14.6 0.8 1.1 1 0 0 1 1 1 0 PIN domain Fur_reg_FbpA PF13076.6 gi|568163865|ref|YP_008947291.1| - 0.18 11.6 1.2 19 5.1 0.0 2.7 2 0 0 2 2 2 0 Fur-regulated basic protein A Chaperone_III PF07824.12 gi|568163866|ref|YP_008947292.1| - 0.036 14.3 0.0 0.044 14.0 0.0 1.1 1 0 0 1 1 1 0 Type III secretion chaperone domain UPF0126 PF03458.13 gi|568163867|ref|YP_008947293.1| - 1.1e-44 150.2 16.4 2.1e-23 82.0 5.8 2.2 2 0 0 2 2 2 2 UPF0126 domain NnrS PF05940.12 gi|568163867|ref|YP_008947293.1| - 0.096 12.1 7.5 0.14 11.5 7.5 1.3 1 1 0 1 1 1 0 NnrS protein TPR_2 PF07719.17 gi|568163868|ref|YP_008947294.1| - 1.8e-23 80.7 16.3 1.6e-05 24.7 0.2 7.9 8 0 0 8 8 8 4 Tetratricopeptide repeat TPR_1 PF00515.28 gi|568163868|ref|YP_008947294.1| - 6e-20 70.2 24.5 2e-06 27.4 0.5 7.0 8 0 0 8 8 7 4 Tetratricopeptide repeat TPR_8 PF13181.6 gi|568163868|ref|YP_008947294.1| - 8.5e-20 69.3 17.7 2e-05 24.4 0.6 5.7 4 1 1 5 5 5 4 Tetratricopeptide repeat TPR_16 PF13432.6 gi|568163868|ref|YP_008947294.1| - 3e-17 63.0 0.9 5.9e-05 23.6 0.0 4.8 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_11 PF13414.6 gi|568163868|ref|YP_008947294.1| - 9.8e-16 57.2 22.1 2.2e-10 40.0 0.9 6.4 4 2 2 6 6 6 4 TPR repeat TPR_17 PF13431.6 gi|568163868|ref|YP_008947294.1| - 2.7e-15 55.6 6.4 0.00012 22.2 0.2 5.5 5 1 1 6 6 6 3 Tetratricopeptide repeat TPR_19 PF14559.6 gi|568163868|ref|YP_008947294.1| - 2.9e-12 46.9 10.4 8.3e-05 23.0 0.2 5.1 4 1 2 6 6 5 3 Tetratricopeptide repeat TPR_9 PF13371.6 gi|568163868|ref|YP_008947294.1| - 4.9e-10 39.4 0.0 0.052 13.7 0.0 5.8 4 2 2 6 6 6 2 Tetratricopeptide repeat TPR_12 PF13424.6 gi|568163868|ref|YP_008947294.1| - 1e-09 38.5 9.3 0.023 15.0 0.0 5.5 4 3 2 6 6 6 3 Tetratricopeptide repeat TPR_7 PF13176.6 gi|568163868|ref|YP_008947294.1| - 1.8e-09 36.9 2.8 0.12 12.5 0.8 5.4 4 1 0 4 4 4 3 Tetratricopeptide repeat TPR_14 PF13428.6 gi|568163868|ref|YP_008947294.1| - 2e-08 34.3 4.5 1.3 10.1 0.3 5.8 4 2 2 6 6 6 3 Tetratricopeptide repeat NARP1 PF12569.8 gi|568163868|ref|YP_008947294.1| - 2e-07 30.3 5.7 0.0057 15.6 0.0 3.4 1 1 1 3 3 3 3 NMDA receptor-regulated protein 1 ANAPC3 PF12895.7 gi|568163868|ref|YP_008947294.1| - 6.6e-07 29.5 4.5 0.72 10.1 0.0 3.5 2 2 1 3 3 3 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_21 PF09976.9 gi|568163868|ref|YP_008947294.1| - 7.2e-06 25.8 1.0 0.27 10.9 0.0 3.5 2 1 1 3 3 3 3 Tetratricopeptide repeat-like domain FAT PF02259.23 gi|568163868|ref|YP_008947294.1| - 1.4e-05 24.5 0.6 0.03 13.5 0.1 2.8 1 1 1 2 2 2 2 FAT domain TPR_10 PF13374.6 gi|568163868|ref|YP_008947294.1| - 3.9e-05 23.4 9.1 0.33 10.9 0.1 5.0 4 1 1 5 5 5 2 Tetratricopeptide repeat Wzy_C_2 PF11846.8 gi|568163868|ref|YP_008947294.1| - 0.00033 20.6 0.1 0.8 9.6 0.0 2.2 2 0 0 2 2 2 2 Virulence factor membrane-bound polymerase, C-terminal Coatomer_E PF04733.14 gi|568163868|ref|YP_008947294.1| - 0.00034 20.1 0.5 0.00034 20.1 0.5 2.0 2 1 0 2 2 2 1 Coatomer epsilon subunit TPR_6 PF13174.6 gi|568163868|ref|YP_008947294.1| - 0.00062 20.2 15.2 4.2 8.2 0.2 6.2 7 1 1 8 8 7 2 Tetratricopeptide repeat SRP_TPR_like PF17004.5 gi|568163868|ref|YP_008947294.1| - 0.001 19.1 1.8 0.001 19.1 1.8 2.7 1 1 1 2 2 2 1 Putative TPR-like repeat TPR_MalT PF17874.1 gi|568163868|ref|YP_008947294.1| - 0.0022 17.4 0.1 3.3 7.0 0.0 3.4 3 1 0 3 3 3 1 MalT-like TPR region DUF4810 PF16068.5 gi|568163868|ref|YP_008947294.1| - 0.014 15.9 1.4 1.1 9.8 0.0 3.8 2 2 3 5 5 5 0 Domain of unknown function (DUF4810) HrpB1_HrpK PF09613.10 gi|568163868|ref|YP_008947294.1| - 0.027 14.1 0.0 10 5.7 0.0 3.5 2 2 3 5 5 5 0 Bacterial type III secretion protein (HrpB1_HrpK) DUF3856 PF12968.7 gi|568163868|ref|YP_008947294.1| - 0.035 14.2 2.7 28 4.7 0.0 3.7 1 1 3 4 4 4 0 Domain of Unknown Function (DUF3856) MIT PF04212.18 gi|568163868|ref|YP_008947294.1| - 0.035 14.2 8.8 0.11 12.6 0.2 4.0 2 2 1 3 3 3 0 MIT (microtubule interacting and transport) domain TPR_20 PF14561.6 gi|568163868|ref|YP_008947294.1| - 0.039 14.3 1.2 5.8 7.3 0.3 3.7 3 1 1 4 4 4 0 Tetratricopeptide repeat Amino_oxidase PF01593.24 gi|568163869|ref|YP_008947295.1| - 2.8e-10 40.1 0.0 1.9e-05 24.2 0.0 2.5 3 0 0 3 3 3 2 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 gi|568163869|ref|YP_008947295.1| - 7.7e-10 38.9 0.3 1.9e-09 37.6 0.3 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|568163869|ref|YP_008947295.1| - 1.1e-08 35.0 0.1 9.8e-08 32.0 0.1 2.1 1 1 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox PF00070.27 gi|568163869|ref|YP_008947295.1| - 1e-07 32.4 4.6 0.0014 19.2 0.7 2.7 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 gi|568163869|ref|YP_008947295.1| - 1.7e-07 30.8 3.3 0.00011 21.5 0.2 2.4 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|568163869|ref|YP_008947295.1| - 1.1e-06 27.6 1.6 0.0011 17.7 0.7 2.1 2 0 0 2 2 2 2 HI0933-like protein GDI PF00996.18 gi|568163869|ref|YP_008947295.1| - 2.9e-06 26.1 0.8 0.0074 14.9 0.0 2.2 2 0 0 2 2 2 2 GDP dissociation inhibitor FAD_binding_2 PF00890.24 gi|568163869|ref|YP_008947295.1| - 5.2e-05 22.5 1.0 0.029 13.4 1.0 2.1 2 0 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.7 gi|568163869|ref|YP_008947295.1| - 0.00042 19.8 4.3 0.00076 18.9 1.1 2.2 2 0 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|568163869|ref|YP_008947295.1| - 0.00061 19.1 0.5 0.00097 18.5 0.5 1.2 1 0 0 1 1 1 1 FAD binding domain UDPG_MGDP_dh_N PF03721.14 gi|568163869|ref|YP_008947295.1| - 0.016 14.8 0.1 0.028 14.0 0.1 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Thi4 PF01946.17 gi|568163869|ref|YP_008947295.1| - 0.016 14.4 3.5 0.077 12.2 0.3 2.2 2 0 0 2 2 2 0 Thi4 family GIDA PF01134.22 gi|568163869|ref|YP_008947295.1| - 0.021 13.9 4.5 0.035 13.2 0.5 2.5 3 0 0 3 3 3 0 Glucose inhibited division protein A 3HCDH_N PF02737.18 gi|568163869|ref|YP_008947295.1| - 0.024 14.5 2.6 2.2 8.2 0.4 2.4 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CUE PF02845.16 gi|568163869|ref|YP_008947295.1| - 0.046 13.4 0.1 0.1 12.3 0.1 1.6 1 0 0 1 1 1 0 CUE domain Phage_Mu_Gam PF07352.12 gi|568163869|ref|YP_008947295.1| - 0.063 13.2 0.1 0.2 11.6 0.1 1.8 2 0 0 2 2 2 0 Bacteriophage Mu Gam like protein NAD_binding_7 PF13241.6 gi|568163869|ref|YP_008947295.1| - 0.068 13.6 0.1 0.22 12.0 0.0 2.0 2 0 0 2 2 2 0 Putative NAD(P)-binding Lycopene_cycl PF05834.12 gi|568163869|ref|YP_008947295.1| - 0.17 10.9 0.5 0.28 10.2 0.5 1.3 1 0 0 1 1 1 0 Lycopene cyclase protein Trp_halogenase PF04820.14 gi|568163869|ref|YP_008947295.1| - 0.22 10.3 4.8 0.23 10.3 0.3 2.1 2 0 0 2 2 2 0 Tryptophan halogenase 4HBT PF03061.22 gi|568163870|ref|YP_008947296.1| - 2.4e-15 56.7 0.1 3.3e-15 56.2 0.1 1.2 1 0 0 1 1 1 1 Thioesterase superfamily 4HBT_3 PF13622.6 gi|568163870|ref|YP_008947296.1| - 0.025 14.8 0.0 0.029 14.6 0.0 1.1 1 0 0 1 1 1 0 Thioesterase-like superfamily DUF4442 PF14539.6 gi|568163870|ref|YP_008947296.1| - 0.072 13.2 0.0 0.092 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4442) TrmB PF01978.19 gi|568163871|ref|YP_008947297.1| - 1.5e-10 40.8 0.1 2.2e-10 40.3 0.1 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|568163871|ref|YP_008947297.1| - 5.5e-07 29.4 1.3 9e-07 28.7 1.3 1.4 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|568163871|ref|YP_008947297.1| - 6.2e-07 29.8 0.2 9.2e-07 29.3 0.2 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain TFIIE_alpha PF02002.17 gi|568163871|ref|YP_008947297.1| - 2.6e-06 27.3 0.9 3e-06 27.0 0.9 1.2 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_11 PF08279.12 gi|568163871|ref|YP_008947297.1| - 4.1e-06 26.7 0.6 7e-06 25.9 0.6 1.4 1 0 0 1 1 1 1 HTH domain HTH_5 PF01022.20 gi|568163871|ref|YP_008947297.1| - 6.8e-05 22.7 0.3 0.00011 22.0 0.3 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family GntR PF00392.21 gi|568163871|ref|YP_008947297.1| - 0.00012 21.6 0.0 0.00021 20.8 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family MarR_2 PF12802.7 gi|568163871|ref|YP_008947297.1| - 0.00018 21.3 0.0 0.00024 20.9 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_DeoR PF08220.12 gi|568163871|ref|YP_008947297.1| - 0.00024 20.8 0.4 0.00042 20.0 0.4 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain Fe_dep_repress PF01325.19 gi|568163871|ref|YP_008947297.1| - 0.00024 21.2 0.5 0.0004 20.5 0.5 1.5 1 1 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_Crp_2 PF13545.6 gi|568163871|ref|YP_008947297.1| - 0.00027 20.9 0.0 0.00041 20.3 0.0 1.3 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain DUF4423 PF14394.6 gi|568163871|ref|YP_008947297.1| - 0.00034 20.4 0.1 0.00036 20.3 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_24 PF13412.6 gi|568163871|ref|YP_008947297.1| - 0.00041 19.8 0.5 0.00078 19.0 0.5 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding PadR PF03551.14 gi|568163871|ref|YP_008947297.1| - 0.00053 19.9 0.2 0.00087 19.2 0.2 1.3 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family SMC_ScpB PF04079.16 gi|568163871|ref|YP_008947297.1| - 0.00053 19.6 0.1 0.00069 19.3 0.1 1.1 1 0 0 1 1 1 1 Segregation and condensation complex subunit ScpB Phage_rep_O PF04492.13 gi|568163871|ref|YP_008947297.1| - 0.0011 19.5 0.1 0.0024 18.4 0.1 1.6 1 0 0 1 1 1 1 Bacteriophage replication protein O Rrf2 PF02082.20 gi|568163871|ref|YP_008947297.1| - 0.0079 16.5 0.1 0.012 15.9 0.1 1.3 1 0 0 1 1 1 1 Transcriptional regulator HrcA_DNA-bdg PF03444.15 gi|568163871|ref|YP_008947297.1| - 0.012 15.3 0.4 0.02 14.6 0.4 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Tfb2 PF03849.14 gi|568163871|ref|YP_008947297.1| - 0.013 14.5 0.1 0.014 14.3 0.1 1.0 1 0 0 1 1 1 0 Transcription factor Tfb2 DDRGK PF09756.9 gi|568163871|ref|YP_008947297.1| - 0.016 14.8 0.3 0.021 14.4 0.3 1.2 1 0 0 1 1 1 0 DDRGK domain DUF2250 PF10007.9 gi|568163871|ref|YP_008947297.1| - 0.023 14.8 0.7 0.037 14.2 0.6 1.6 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_34 PF13601.6 gi|568163871|ref|YP_008947297.1| - 0.024 14.8 0.3 0.035 14.3 0.3 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_10 PF04967.12 gi|568163871|ref|YP_008947297.1| - 0.029 14.2 0.1 0.051 13.4 0.1 1.4 1 0 0 1 1 1 0 HTH DNA binding domain FeoC PF09012.10 gi|568163871|ref|YP_008947297.1| - 0.031 14.3 0.1 0.048 13.7 0.1 1.3 1 0 0 1 1 1 0 FeoC like transcriptional regulator RP-C PF03428.13 gi|568163871|ref|YP_008947297.1| - 0.034 13.8 0.0 0.043 13.5 0.0 1.3 1 0 0 1 1 1 0 Replication protein C N-terminal domain HTH_36 PF13730.6 gi|568163871|ref|YP_008947297.1| - 0.047 13.7 0.1 0.069 13.1 0.1 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain B-block_TFIIIC PF04182.12 gi|568163871|ref|YP_008947297.1| - 0.047 13.8 0.2 0.072 13.2 0.2 1.4 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC Penicillinase_R PF03965.16 gi|568163871|ref|YP_008947297.1| - 0.056 13.8 0.5 0.085 13.2 0.5 1.5 1 1 0 1 1 1 0 Penicillinase repressor HTH_20 PF12840.7 gi|568163871|ref|YP_008947297.1| - 0.057 13.5 0.0 0.086 12.9 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain L27 PF02828.16 gi|568163872|ref|YP_008947298.1| - 0.038 13.8 0.8 1.6 8.5 0.1 2.5 2 0 0 2 2 2 0 L27 domain Fis1_TPR_C PF14853.6 gi|568163872|ref|YP_008947298.1| - 0.1 12.7 0.8 0.47 10.6 0.3 2.5 2 2 1 3 3 3 0 Fis1 C-terminal tetratricopeptide repeat AAA_23 PF13476.6 gi|568163872|ref|YP_008947298.1| - 0.16 12.4 3.6 0.27 11.7 3.5 1.4 1 1 0 1 1 1 0 AAA domain NAD_synthase PF02540.17 gi|568163872|ref|YP_008947298.1| - 0.69 9.0 4.1 0.19 10.8 0.6 1.7 2 0 0 2 2 2 0 NAD synthase GHMP_kinases_N PF00288.26 gi|568163873|ref|YP_008947299.1| - 2.9e-15 56.3 0.6 8.2e-15 54.8 0.2 1.9 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|568163873|ref|YP_008947299.1| - 0.00026 21.3 0.1 0.00076 19.8 0.0 1.8 2 0 0 2 2 2 1 GHMP kinases C terminal OSCP PF00213.18 gi|568163873|ref|YP_008947299.1| - 0.026 14.7 0.6 0.043 14.0 0.6 1.3 1 0 0 1 1 1 0 ATP synthase delta (OSCP) subunit PCRF PF03462.18 gi|568163873|ref|YP_008947299.1| - 0.055 13.3 0.3 0.081 12.8 0.3 1.2 1 0 0 1 1 1 0 PCRF domain Filo_VP35 PF02097.15 gi|568163873|ref|YP_008947299.1| - 0.061 12.4 0.0 0.086 11.9 0.0 1.2 1 0 0 1 1 1 0 Filoviridae VP35 MDD_C PF18376.1 gi|568163874|ref|YP_008947300.1| - 2.9e-33 115.2 0.1 1.6e-31 109.5 0.0 2.2 1 1 1 2 2 2 2 Mevalonate 5-diphosphate decarboxylase C-terminal domain GHMP_kinases_N PF00288.26 gi|568163874|ref|YP_008947300.1| - 8.5e-08 32.3 1.4 1.8e-07 31.3 1.4 1.5 1 0 0 1 1 1 1 GHMP kinases N terminal domain malic PF00390.19 gi|568163874|ref|YP_008947300.1| - 0.17 11.7 0.3 1.3 8.8 0.1 2.2 3 0 0 3 3 3 0 Malic enzyme, N-terminal domain HD PF01966.22 gi|568163875|ref|YP_008947301.1| - 1.7e-14 54.1 0.1 4.3e-14 52.8 0.0 1.8 2 0 0 2 2 2 1 HD domain HDOD PF08668.12 gi|568163875|ref|YP_008947301.1| - 0.0022 17.5 0.0 0.004 16.7 0.0 1.5 1 0 0 1 1 1 1 HDOD domain PDEase_I PF00233.19 gi|568163875|ref|YP_008947301.1| - 0.013 15.2 0.0 0.026 14.3 0.0 1.4 1 0 0 1 1 1 0 3'5'-cyclic nucleotide phosphodiesterase PNP_UDP_1 PF01048.20 gi|568163876|ref|YP_008947302.1| - 1e-37 129.7 0.0 1.3e-37 129.4 0.0 1.1 1 0 0 1 1 1 1 Phosphorylase superfamily DUF334 PF03904.13 gi|568163876|ref|YP_008947302.1| - 0.19 11.3 0.3 0.63 9.5 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF334) Glycos_transf_1 PF00534.20 gi|568163878|ref|YP_008947304.1| - 3.2e-36 124.5 0.2 5e-36 123.8 0.2 1.2 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|568163878|ref|YP_008947304.1| - 3.9e-23 82.4 0.1 6.2e-23 81.7 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|568163878|ref|YP_008947304.1| - 9e-06 26.0 0.0 1.8e-05 25.0 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_20 PF00982.21 gi|568163878|ref|YP_008947304.1| - 0.0021 16.8 1.0 0.019 13.7 1.0 2.1 1 1 0 1 1 1 1 Glycosyltransferase family 20 RRM_2 PF04059.12 gi|568163878|ref|YP_008947304.1| - 0.012 15.9 0.2 0.14 12.4 0.1 2.6 3 0 0 3 3 3 0 RNA recognition motif 2 Mrr_cat PF04471.12 gi|568163878|ref|YP_008947304.1| - 0.056 13.5 0.1 0.17 11.9 0.1 1.8 1 1 0 1 1 1 0 Restriction endonuclease Glyco_hydro_15 PF00723.21 gi|568163879|ref|YP_008947305.1| - 1.1e-44 153.0 0.0 4.9e-44 150.8 0.1 1.7 1 1 1 2 2 2 1 Glycosyl hydrolases family 15 Glyco_hydro_125 PF06824.11 gi|568163879|ref|YP_008947305.1| - 0.006 15.5 0.1 0.073 11.9 0.0 2.5 1 1 1 2 2 2 1 Metal-independent alpha-mannosidase (GH125) TPR_19 PF14559.6 gi|568163879|ref|YP_008947305.1| - 0.042 14.4 0.0 0.31 11.6 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat Serpin PF00079.20 gi|568163879|ref|YP_008947305.1| - 0.12 11.6 0.0 0.21 10.8 0.0 1.3 1 0 0 1 1 1 0 Serpin (serine protease inhibitor) Phage_holin_2_4 PF16082.5 gi|568163880|ref|YP_008947306.1| - 1.5 8.6 4.0 1.2 8.9 0.7 2.1 1 1 1 2 2 2 0 Bacteriophage holin family, superfamily II-like GWT1 PF06423.12 gi|568163880|ref|YP_008947306.1| - 5.7 7.1 9.0 1.6 8.8 4.6 2.0 1 1 1 2 2 2 0 GWT1 Macro PF01661.21 gi|568163881|ref|YP_008947307.1| - 1.9e-36 124.7 0.0 2.4e-36 124.4 0.0 1.1 1 0 0 1 1 1 1 Macro domain Lactamase_B PF00753.27 gi|568163882|ref|YP_008947308.1| - 6.5e-06 26.3 2.0 2.4e-05 24.4 2.0 1.9 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|568163882|ref|YP_008947308.1| - 0.038 13.5 0.1 0.067 12.7 0.1 1.4 1 1 0 1 1 1 0 Beta-lactamase superfamily domain FMN_red PF03358.15 gi|568163883|ref|YP_008947310.1| - 8.8e-41 139.2 0.0 1.2e-40 138.8 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|568163883|ref|YP_008947310.1| - 3.2e-07 30.3 0.0 4.3e-07 29.8 0.0 1.3 1 1 0 1 1 1 1 Flavodoxin-like fold DUF1987 PF09345.10 gi|568163883|ref|YP_008947310.1| - 0.0019 17.8 0.0 0.0032 17.1 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF1987) MFS_1 PF07690.16 gi|568163884|ref|YP_008947311.1| - 3.1e-35 121.7 50.3 2.1e-20 73.0 28.9 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily FAM35_C PF15793.5 gi|568163884|ref|YP_008947311.1| - 0.16 11.3 0.0 1.1 8.7 0.0 1.9 2 0 0 2 2 2 0 Protein family FAM35, C-terminal ISK_Channel PF02060.15 gi|568163884|ref|YP_008947311.1| - 4.3 7.1 7.7 13 5.5 0.2 2.7 3 0 0 3 3 3 0 Slow voltage-gated potassium channel 4HBT PF03061.22 gi|568163885|ref|YP_008947312.1| - 9.1e-07 29.2 0.0 1.4e-06 28.6 0.0 1.3 1 1 0 1 1 1 1 Thioesterase superfamily 4HBT_2 PF13279.6 gi|568163885|ref|YP_008947312.1| - 7.6e-06 26.4 0.0 9e-06 26.2 0.0 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily DUF3284 PF11687.8 gi|568164864|ref|YP_008947313.1| - 0.095 12.6 0.1 0.11 12.3 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3284) TfoX_C PF04994.13 gi|568164864|ref|YP_008947313.1| - 0.1 12.7 0.0 0.11 12.6 0.0 1.1 1 0 0 1 1 1 0 TfoX C-terminal domain NTP_transferase PF00483.23 gi|568163886|ref|YP_008947314.1| - 4.1e-33 115.0 0.0 4.7e-33 114.8 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|568163886|ref|YP_008947314.1| - 1e-09 39.0 0.0 1.3e-09 38.6 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|568163886|ref|YP_008947314.1| - 0.002 17.9 0.0 0.004 16.9 0.0 1.5 2 0 0 2 2 2 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DNA_binding_1 PF01035.20 gi|568163887|ref|YP_008947315.1| - 3e-24 84.9 0.0 3.8e-24 84.6 0.0 1.1 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain Methyltransf_1N PF02870.15 gi|568163887|ref|YP_008947315.1| - 0.04 14.7 0.0 0.26 12.1 0.0 2.2 1 1 0 1 1 1 0 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Sigma70_r4_2 PF08281.12 gi|568163887|ref|YP_008947315.1| - 0.046 13.4 0.0 0.083 12.6 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 tRNA-synt_2b PF00587.25 gi|568163888|ref|YP_008947316.1| - 1.6e-41 142.3 0.0 4.3e-41 140.8 0.0 1.8 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 gi|568163888|ref|YP_008947316.1| - 9e-18 64.2 2.7 1.3e-17 63.7 1.0 2.1 2 0 0 2 2 2 1 Anticodon binding domain Glyco_tran_28_C PF04101.16 gi|568163889|ref|YP_008947317.1| - 1.8e-10 41.1 0.0 3.5e-10 40.1 0.0 1.5 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Ntox50 PF15542.6 gi|568163889|ref|YP_008947317.1| - 0.17 12.7 0.7 0.59 11.0 0.2 2.1 2 0 0 2 2 2 0 Bacterial toxin 50 HhH-GPD PF00730.25 gi|568163890|ref|YP_008947318.1| - 1.9e-10 41.2 0.0 2.6e-10 40.7 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein DUF4332 PF14229.6 gi|568163890|ref|YP_008947318.1| - 0.00024 21.3 0.3 0.0012 19.0 0.5 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4332) HHH PF00633.23 gi|568163890|ref|YP_008947318.1| - 0.0033 17.2 0.2 0.026 14.4 0.0 2.4 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|568163890|ref|YP_008947318.1| - 0.049 14.2 2.6 11 6.7 0.7 2.7 1 1 1 2 2 2 0 Helix-hairpin-helix domain EndIII_4Fe-2S PF10576.9 gi|568163890|ref|YP_008947318.1| - 0.14 12.5 1.1 0.24 11.8 1.1 1.4 1 0 0 1 1 1 0 Iron-sulfur binding domain of endonuclease III ATP-grasp_2 PF08442.10 gi|568163891|ref|YP_008947319.1| - 1.9e-28 99.4 3.0 2.1e-27 96.0 0.7 3.1 2 2 0 2 2 2 1 ATP-grasp domain Ligase_CoA PF00549.19 gi|568163891|ref|YP_008947319.1| - 1.2e-15 57.6 0.3 2.4e-15 56.6 0.3 1.4 1 0 0 1 1 1 1 CoA-ligase ATP-grasp_5 PF13549.6 gi|568163891|ref|YP_008947319.1| - 2.7e-06 27.0 0.1 0.058 12.8 0.1 3.6 2 1 1 3 3 3 2 ATP-grasp domain NAD_binding_10 PF13460.6 gi|568163891|ref|YP_008947319.1| - 0.015 15.2 0.1 0.7 9.8 0.0 2.2 2 0 0 2 2 2 0 NAD(P)H-binding ATP-grasp PF02222.22 gi|568163891|ref|YP_008947319.1| - 0.11 12.0 0.0 0.23 11.0 0.0 1.5 1 0 0 1 1 1 0 ATP-grasp domain CoA_binding PF02629.19 gi|568163892|ref|YP_008947320.1| - 5.1e-23 81.6 2.0 5.1e-23 81.6 2.0 2.4 2 1 0 2 2 2 1 CoA binding domain Ligase_CoA PF00549.19 gi|568163892|ref|YP_008947320.1| - 1.3e-12 47.8 1.2 2.2e-12 47.1 1.2 1.3 1 0 0 1 1 1 1 CoA-ligase Succ_CoA_lig PF13607.6 gi|568163892|ref|YP_008947320.1| - 4.7e-08 32.9 0.0 7.7e-08 32.2 0.0 1.4 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 gi|568163892|ref|YP_008947320.1| - 3.4e-07 30.8 0.0 7.8e-07 29.6 0.0 1.6 1 0 0 1 1 1 1 CoA binding domain PDZ_6 PF17820.1 gi|568163892|ref|YP_008947320.1| - 0.015 15.1 0.1 0.7 9.8 0.0 2.4 2 0 0 2 2 2 0 PDZ domain DUF4369 PF14289.6 gi|568164865|ref|YP_008947321.1| - 0.14 12.7 5.9 0.35 11.4 0.7 3.3 3 1 0 3 3 3 0 Domain of unknown function (DUF4369) YcxB PF14317.6 gi|568164865|ref|YP_008947321.1| - 0.22 11.3 8.0 1.3 8.8 0.9 2.6 2 0 0 2 2 2 0 YcxB-like protein Pro_CA PF00484.19 gi|568163893|ref|YP_008947322.1| - 1.2e-07 32.2 0.0 2.4e-07 31.2 0.0 1.5 1 0 0 1 1 1 1 Carbonic anhydrase STT3 PF02516.14 gi|568163895|ref|YP_008947324.1| - 9.6e-18 64.4 39.8 9.6e-18 64.4 39.8 1.8 2 0 0 2 2 2 1 Oligosaccharyl transferase STT3 subunit Nop10p PF04135.12 gi|568163896|ref|YP_008947325.1| - 2.5e-22 78.7 2.9 2.7e-22 78.5 2.9 1.0 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family NOB1_Zn_bind PF08772.11 gi|568163896|ref|YP_008947325.1| - 0.0081 16.3 0.1 0.0091 16.1 0.1 1.2 1 0 0 1 1 1 1 Nin one binding (NOB1) Zn-ribbon like Elf1 PF05129.13 gi|568163896|ref|YP_008947325.1| - 0.029 14.4 0.0 0.041 13.9 0.0 1.4 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like RecR PF02132.15 gi|568163896|ref|YP_008947325.1| - 0.033 13.8 0.5 0.048 13.2 0.5 1.3 1 0 0 1 1 1 0 RecR protein Secapin PF17521.2 gi|568163896|ref|YP_008947325.1| - 0.63 9.9 4.0 0.31 10.9 1.1 1.8 1 1 1 2 2 2 0 Honey bee peptides EIF_2_alpha PF07541.12 gi|568163897|ref|YP_008947326.1| - 1.9e-21 76.3 0.2 1.9e-21 76.3 0.2 2.1 2 1 0 2 2 2 1 Eukaryotic translation initiation factor 2 alpha subunit S1 PF00575.23 gi|568163897|ref|YP_008947326.1| - 4.4e-11 43.0 0.1 4.4e-11 43.0 0.1 2.4 2 0 0 2 2 2 1 S1 RNA binding domain N6_N4_Mtase PF01555.18 gi|568163897|ref|YP_008947326.1| - 0.031 14.0 2.0 0.042 13.6 2.0 1.2 1 0 0 1 1 1 0 DNA methylase DUF848 PF05852.11 gi|568163897|ref|YP_008947326.1| - 0.59 10.2 6.9 0.32 11.1 0.1 2.3 1 1 0 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) Ribosomal_S27e PF01667.17 gi|568163898|ref|YP_008947327.1| - 2.3e-19 68.8 1.7 2.6e-19 68.7 1.7 1.1 1 0 0 1 1 1 1 Ribosomal protein S27 DNA_RNApol_7kD PF03604.13 gi|568163898|ref|YP_008947327.1| - 0.0051 16.5 2.1 0.014 15.0 2.1 1.8 1 1 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit HypA PF01155.19 gi|568163898|ref|YP_008947327.1| - 0.01 15.9 0.1 0.011 15.8 0.1 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF951 PF06107.11 gi|568163898|ref|YP_008947327.1| - 0.011 15.6 1.7 0.33 10.9 0.0 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF951) DUF3797 PF12677.7 gi|568163898|ref|YP_008947327.1| - 0.015 15.2 1.8 2.9 7.9 0.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) TF_Zn_Ribbon PF08271.12 gi|568163898|ref|YP_008947327.1| - 0.047 13.2 0.4 0.064 12.8 0.4 1.2 1 0 0 1 1 1 0 TFIIB zinc-binding RNA_pol_N PF01194.17 gi|568163898|ref|YP_008947327.1| - 0.25 11.7 0.7 0.25 11.7 0.7 1.8 2 0 0 2 2 2 0 RNA polymerases N / 8 kDa subunit Ribosomal_L44 PF00935.19 gi|568163899|ref|YP_008947328.1| - 6.5e-28 97.0 9.2 6.5e-28 97.0 9.2 1.5 1 1 1 2 2 2 1 Ribosomal protein L44 RNA_POL_M_15KD PF02150.16 gi|568163899|ref|YP_008947328.1| - 0.075 12.9 0.8 3.6 7.5 0.1 2.3 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit Ribosomal_L33 PF00471.20 gi|568163899|ref|YP_008947328.1| - 0.076 13.5 1.6 0.076 13.5 1.6 2.9 2 1 1 3 3 3 0 Ribosomal protein L33 Cys_rich_KTR PF14205.6 gi|568163899|ref|YP_008947328.1| - 0.17 11.7 4.9 0.63 9.9 0.2 2.2 2 0 0 2 2 2 0 Cysteine-rich KTR zinc_ribbon_4 PF13717.6 gi|568163899|ref|YP_008947328.1| - 0.19 11.7 4.6 3.4 7.7 0.3 2.3 2 0 0 2 2 2 0 zinc-ribbon domain CxC5 PF18718.1 gi|568163899|ref|YP_008947328.1| - 0.33 11.1 6.8 0.44 10.6 1.0 2.1 1 1 0 2 2 2 0 CxC5 like cysteine cluster associated with KDZ transposases 3-HAO PF06052.12 gi|568163900|ref|YP_008947329.1| - 0.02 14.6 0.0 0.035 13.8 0.0 1.4 1 0 0 1 1 1 0 3-hydroxyanthranilic acid dioxygenase DNA_primase_S PF01896.19 gi|568163901|ref|YP_008947330.1| - 1.4e-10 41.5 0.8 8.9e-05 22.6 1.0 2.5 2 1 0 2 2 2 2 DNA primase small subunit PCNA_N PF00705.18 gi|568163902|ref|YP_008947331.1| - 6.3e-10 38.8 0.1 1.5e-09 37.6 0.1 1.6 2 0 0 2 2 2 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 gi|568163902|ref|YP_008947331.1| - 0.00094 19.4 0.0 0.021 15.0 0.0 2.7 2 1 0 3 3 3 1 Proliferating cell nuclear antigen, C-terminal domain Rad9 PF04139.13 gi|568163902|ref|YP_008947331.1| - 0.0062 16.0 0.0 0.0069 15.9 0.0 1.1 1 0 0 1 1 1 1 Rad9 Rad1 PF02144.16 gi|568163902|ref|YP_008947331.1| - 0.016 14.3 0.0 0.69 8.9 0.0 2.1 1 1 1 2 2 2 0 Repair protein Rad1/Rec1/Rad17 ATP_bind_1 PF03029.17 gi|568163903|ref|YP_008947332.1| - 5.6e-58 196.6 0.0 6.3e-58 196.4 0.0 1.0 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein CLP1_P PF16575.5 gi|568163903|ref|YP_008947332.1| - 2.2e-06 27.6 0.0 0.0069 16.2 0.0 3.1 3 0 0 3 3 3 1 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_18 PF13238.6 gi|568163903|ref|YP_008947332.1| - 0.00012 22.6 0.0 0.00019 21.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain PduV-EutP PF10662.9 gi|568163903|ref|YP_008947332.1| - 0.00022 21.0 0.0 0.015 15.1 0.0 2.7 2 1 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation DUF87 PF01935.17 gi|568163903|ref|YP_008947332.1| - 0.00048 20.3 0.1 0.00063 19.9 0.1 1.6 1 1 0 1 1 1 1 Helicase HerA, central domain SRP54 PF00448.22 gi|568163903|ref|YP_008947332.1| - 0.0011 18.7 0.0 0.022 14.4 0.0 2.1 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain cobW PF02492.19 gi|568163903|ref|YP_008947332.1| - 0.0012 18.5 0.0 0.093 12.3 0.0 2.4 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain AAA_22 PF13401.6 gi|568163903|ref|YP_008947332.1| - 0.0015 18.8 0.0 0.011 16.0 0.0 2.3 2 1 0 2 2 2 1 AAA domain AAA_19 PF13245.6 gi|568163903|ref|YP_008947332.1| - 0.0017 18.7 0.1 0.43 10.9 0.0 2.5 2 1 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|568163903|ref|YP_008947332.1| - 0.0025 18.2 0.0 0.0047 17.3 0.0 1.6 2 0 0 2 2 1 1 AAA ATPase domain Septin PF00735.18 gi|568163903|ref|YP_008947332.1| - 0.0044 16.3 0.1 0.25 10.6 0.0 2.4 2 1 0 2 2 2 1 Septin RsgA_GTPase PF03193.16 gi|568163903|ref|YP_008947332.1| - 0.0044 16.9 0.0 2.4 8.1 0.0 3.3 3 1 0 3 3 3 1 RsgA GTPase NTPase_1 PF03266.15 gi|568163903|ref|YP_008947332.1| - 0.0046 16.9 0.1 0.46 10.4 0.0 2.4 2 0 0 2 2 2 1 NTPase MMR_HSR1 PF01926.23 gi|568163903|ref|YP_008947332.1| - 0.005 16.9 0.1 0.05 13.7 0.1 2.2 1 1 0 1 1 1 1 50S ribosome-binding GTPase NACHT PF05729.12 gi|568163903|ref|YP_008947332.1| - 0.0051 16.8 0.0 0.01 15.8 0.0 1.5 1 0 0 1 1 1 1 NACHT domain CbiA PF01656.23 gi|568163903|ref|YP_008947332.1| - 0.0055 16.8 0.0 0.017 15.2 0.0 1.3 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_30 PF13604.6 gi|568163903|ref|YP_008947332.1| - 0.011 15.5 0.0 0.082 12.6 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 gi|568163903|ref|YP_008947332.1| - 0.011 15.4 0.0 0.018 14.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain Dynamin_N PF00350.23 gi|568163903|ref|YP_008947332.1| - 0.012 15.7 0.1 1.5 8.9 0.0 2.3 2 0 0 2 2 2 0 Dynamin family AAA_29 PF13555.6 gi|568163903|ref|YP_008947332.1| - 0.012 15.3 0.0 0.023 14.4 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_28 PF13521.6 gi|568163903|ref|YP_008947332.1| - 0.014 15.7 0.0 0.02 15.1 0.0 1.5 1 1 0 1 1 1 0 AAA domain ArsA_ATPase PF02374.15 gi|568163903|ref|YP_008947332.1| - 0.015 14.5 0.0 0.022 14.0 0.0 1.4 1 0 0 1 1 1 0 Anion-transporting ATPase FeoB_N PF02421.18 gi|568163903|ref|YP_008947332.1| - 0.018 14.6 0.1 0.57 9.7 0.0 2.4 2 0 0 2 2 2 0 Ferrous iron transport protein B KTI12 PF08433.10 gi|568163903|ref|YP_008947332.1| - 0.018 14.5 0.0 0.084 12.3 0.0 2.0 2 0 0 2 2 2 0 Chromatin associated protein KTI12 MMR_HSR1_Xtn PF16897.5 gi|568163903|ref|YP_008947332.1| - 0.028 14.4 0.1 6.6 6.8 0.0 2.8 2 1 1 3 3 3 0 C-terminal region of MMR_HSR1 domain MeaB PF03308.16 gi|568163903|ref|YP_008947332.1| - 0.029 13.4 0.0 0.046 12.7 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Viral_helicase1 PF01443.18 gi|568163903|ref|YP_008947332.1| - 0.031 14.0 0.0 0.068 12.9 0.0 1.6 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase T2SSE PF00437.20 gi|568163903|ref|YP_008947332.1| - 0.033 13.2 0.0 0.049 12.7 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_14 PF13173.6 gi|568163903|ref|YP_008947332.1| - 0.044 13.8 0.2 0.2 11.7 0.1 2.3 1 1 1 2 2 2 0 AAA domain MobB PF03205.14 gi|568163903|ref|YP_008947332.1| - 0.048 13.6 0.0 0.1 12.5 0.0 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B PhoH PF02562.16 gi|568163903|ref|YP_008947332.1| - 0.062 12.7 0.0 0.11 11.9 0.0 1.4 1 0 0 1 1 1 0 PhoH-like protein ABC_tran PF00005.27 gi|568163903|ref|YP_008947332.1| - 0.063 13.8 0.2 0.13 12.8 0.1 1.5 1 1 0 1 1 1 0 ABC transporter NB-ARC PF00931.22 gi|568163903|ref|YP_008947332.1| - 0.082 12.1 0.0 0.13 11.4 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain RNA_helicase PF00910.22 gi|568163903|ref|YP_008947332.1| - 0.093 13.1 0.0 0.33 11.4 0.0 2.0 3 0 0 3 3 1 0 RNA helicase KAP_NTPase PF07693.14 gi|568163903|ref|YP_008947332.1| - 0.098 11.9 0.0 0.15 11.2 0.0 1.4 1 1 0 1 1 1 0 KAP family P-loop domain Zeta_toxin PF06414.12 gi|568163903|ref|YP_008947332.1| - 0.13 11.5 0.0 0.18 11.1 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin APS_kinase PF01583.20 gi|568163903|ref|YP_008947332.1| - 0.14 12.0 0.0 0.28 11.1 0.0 1.5 1 0 0 1 1 1 0 Adenylylsulphate kinase GTP_EFTU PF00009.27 gi|568163903|ref|YP_008947332.1| - 0.16 11.5 0.0 24 4.4 0.0 2.9 3 0 0 3 3 3 0 Elongation factor Tu GTP binding domain CPT PF07931.12 gi|568163903|ref|YP_008947332.1| - 0.16 11.8 0.0 0.26 11.1 0.0 1.4 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein AAA_33 PF13671.6 gi|568163903|ref|YP_008947332.1| - 0.21 11.7 0.0 0.37 11.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain Pribosyltran_N PF13793.6 gi|568163904|ref|YP_008947333.1| - 3.6e-28 97.8 0.0 1.7e-27 95.7 0.0 2.0 2 0 0 2 2 2 1 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyltran PF00156.27 gi|568163904|ref|YP_008947333.1| - 3.1e-17 62.5 0.5 6.5e-17 61.5 0.2 1.7 2 0 0 2 2 2 1 Phosphoribosyl transferase domain Pribosyl_synth PF14572.6 gi|568163904|ref|YP_008947333.1| - 6.6e-13 49.1 2.2 6.6e-13 49.1 2.2 1.7 2 0 0 2 2 2 1 Phosphoribosyl synthetase-associated domain UPRTase PF14681.6 gi|568163904|ref|YP_008947333.1| - 0.00022 20.8 0.1 0.00051 19.5 0.1 1.6 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|568163904|ref|YP_008947333.1| - 0.0074 15.8 0.1 0.014 14.9 0.1 1.5 1 0 0 1 1 1 1 Phosphoribosyl transferase UPF0020 PF01170.18 gi|568163905|ref|YP_008947334.1| - 5.6e-22 78.4 0.0 2.5e-21 76.2 0.0 1.9 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 N6_N4_Mtase PF01555.18 gi|568163905|ref|YP_008947334.1| - 4.1e-11 43.0 0.1 1.7e-09 37.8 0.0 2.1 2 0 0 2 2 2 1 DNA methylase Methyltransf_31 PF13847.6 gi|568163905|ref|YP_008947334.1| - 1.7e-05 24.7 0.0 4.4e-05 23.3 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|568163905|ref|YP_008947334.1| - 2.6e-05 24.8 0.0 7.4e-05 23.4 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|568163905|ref|YP_008947334.1| - 9.2e-05 22.2 0.0 0.00021 21.0 0.0 1.4 1 1 0 1 1 1 1 Conserved hypothetical protein 95 MTS PF05175.14 gi|568163905|ref|YP_008947334.1| - 0.0034 16.9 0.0 0.022 14.3 0.0 2.0 1 1 1 2 2 2 1 Methyltransferase small domain N6-adenineMlase PF10237.9 gi|568163905|ref|YP_008947334.1| - 0.0051 16.6 0.0 0.0082 16.0 0.0 1.3 1 0 0 1 1 1 1 Probable N6-adenine methyltransferase MethyltransfD12 PF02086.15 gi|568163905|ref|YP_008947334.1| - 0.0058 16.3 0.5 0.053 13.2 0.0 2.4 2 1 1 3 3 3 1 D12 class N6 adenine-specific DNA methyltransferase Methyltransf_15 PF09445.10 gi|568163905|ref|YP_008947334.1| - 0.0064 16.1 0.1 0.022 14.3 0.0 2.0 2 1 0 2 2 2 1 RNA cap guanine-N2 methyltransferase PrmA PF06325.13 gi|568163905|ref|YP_008947334.1| - 0.027 13.9 0.0 0.042 13.2 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_11 PF08241.12 gi|568163905|ref|YP_008947334.1| - 0.037 14.7 0.0 0.092 13.4 0.0 1.7 1 0 0 1 1 1 0 Methyltransferase domain N6_Mtase PF02384.16 gi|568163905|ref|YP_008947334.1| - 0.038 13.3 0.0 0.085 12.1 0.0 1.6 1 0 0 1 1 1 0 N-6 DNA Methylase Eco57I PF07669.11 gi|568163905|ref|YP_008947334.1| - 0.047 14.2 0.0 0.27 11.8 0.0 2.2 2 0 0 2 2 2 0 Eco57I restriction-modification methylase Methyltransf_23 PF13489.6 gi|568163905|ref|YP_008947334.1| - 0.16 11.8 0.0 0.23 11.3 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Lactamase_B_2 PF12706.7 gi|568163906|ref|YP_008947335.1| - 3.9e-16 59.2 0.0 6.6e-09 35.6 0.0 2.1 2 0 0 2 2 2 2 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|568163906|ref|YP_008947335.1| - 3.1e-06 27.4 0.0 3.3e-05 24.0 0.0 2.1 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_4 PF13691.6 gi|568163906|ref|YP_008947335.1| - 0.011 15.4 0.0 0.021 14.5 0.0 1.5 1 0 0 1 1 1 0 tRNase Z endonuclease RNA_binding PF01877.17 gi|568163907|ref|YP_008947336.1| - 3e-18 66.2 0.7 3.8e-18 65.9 0.7 1.1 1 0 0 1 1 1 1 RNA binding AAA_18 PF13238.6 gi|568163908|ref|YP_008947337.1| - 2.2e-10 41.2 0.2 4.7e-10 40.1 0.1 1.6 1 1 1 2 2 2 1 AAA domain AAA_17 PF13207.6 gi|568163908|ref|YP_008947337.1| - 1.1e-08 35.5 0.2 1.7e-08 34.9 0.2 1.2 1 0 0 1 1 1 1 AAA domain ADK PF00406.22 gi|568163908|ref|YP_008947337.1| - 0.00044 20.4 0.1 0.00049 20.2 0.1 1.2 1 0 0 1 1 1 1 Adenylate kinase AAA_33 PF13671.6 gi|568163908|ref|YP_008947337.1| - 0.00067 19.8 0.0 0.001 19.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain CoaE PF01121.20 gi|568163908|ref|YP_008947337.1| - 0.0029 17.3 0.1 0.16 11.7 0.1 2.1 1 1 1 2 2 2 1 Dephospho-CoA kinase P-mevalo_kinase PF04275.14 gi|568163908|ref|YP_008947337.1| - 0.013 15.4 0.1 3 7.8 0.0 2.3 1 1 1 2 2 2 0 Phosphomevalonate kinase LigT_PEase PF02834.16 gi|568163909|ref|YP_008947338.1| - 2.6e-28 98.0 0.0 8.4e-14 51.5 0.0 2.1 2 0 0 2 2 2 2 LigT like Phosphoesterase 2_5_RNA_ligase2 PF13563.6 gi|568163909|ref|YP_008947338.1| - 2.7e-15 56.6 0.0 3.6e-15 56.2 0.0 1.1 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily AKAP7_NLS PF10469.9 gi|568163909|ref|YP_008947338.1| - 6.7e-10 39.2 0.0 1.2e-09 38.4 0.0 1.4 1 1 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain CpcD PF01383.21 gi|568163909|ref|YP_008947338.1| - 0.039 14.2 0.0 0.073 13.3 0.0 1.4 1 0 0 1 1 1 0 CpcD/allophycocyanin linker domain Corona_NS2A PF05213.12 gi|568163909|ref|YP_008947338.1| - 0.1 11.9 0.0 0.26 10.6 0.0 1.6 1 1 0 1 1 1 0 Coronavirus NS2A protein tRNA_NucTransf2 PF09249.11 gi|568163910|ref|YP_008947339.1| - 2.1e-42 143.9 0.0 5e-42 142.7 0.0 1.7 1 0 0 1 1 1 1 tRNA nucleotidyltransferase, second domain NTP_transf_2 PF01909.23 gi|568163910|ref|YP_008947339.1| - 1.7e-15 57.1 0.3 4e-15 55.9 0.3 1.7 1 0 0 1 1 1 1 Nucleotidyltransferase domain SMODS PF18144.1 gi|568163910|ref|YP_008947339.1| - 6.6e-05 23.1 0.0 0.00015 22.0 0.0 1.6 1 0 0 1 1 1 1 Second Messenger Oligonucleotide or Dinucleotide Synthetase domain DNA_pol_B_palm PF14792.6 gi|568163910|ref|YP_008947339.1| - 0.0063 16.7 0.0 0.017 15.4 0.0 1.6 1 0 0 1 1 1 1 DNA polymerase beta palm Polbeta PF18765.1 gi|568163910|ref|YP_008947339.1| - 0.06 13.4 0.0 0.17 12.0 0.0 1.7 1 0 0 1 1 1 0 Polymerase beta, Nucleotidyltransferase RIO1 PF01163.22 gi|568163911|ref|YP_008947340.1| - 0.00033 20.3 0.1 0.00046 19.8 0.1 1.2 1 0 0 1 1 1 1 RIO1 family NIF PF03031.18 gi|568163911|ref|YP_008947340.1| - 0.035 13.9 0.1 0.051 13.3 0.1 1.3 1 0 0 1 1 1 0 NLI interacting factor-like phosphatase Choline_kinase PF01633.20 gi|568163911|ref|YP_008947340.1| - 0.19 11.3 1.0 1.8 8.1 1.0 2.0 1 1 0 1 1 1 0 Choline/ethanolamine kinase zinc_ribbon_2 PF13240.6 gi|568163912|ref|YP_008947341.1| - 0.00075 19.1 3.6 0.14 12.0 0.5 2.2 2 0 0 2 2 2 2 zinc-ribbon domain zf-IS66 PF13005.7 gi|568163912|ref|YP_008947341.1| - 0.0054 17.1 0.5 1.7 9.1 0.0 2.2 2 0 0 2 2 2 1 zinc-finger binding domain of transposase IS66 zf-ACC PF17848.1 gi|568163912|ref|YP_008947341.1| - 0.0068 16.5 2.1 0.63 10.2 0.1 2.3 2 0 0 2 2 2 1 Acetyl-coA carboxylase zinc finger domain zf-Mss51 PF13824.6 gi|568163912|ref|YP_008947341.1| - 0.0076 16.3 1.2 0.66 10.1 0.1 2.1 2 0 0 2 2 2 1 Zinc-finger of mitochondrial splicing suppressor 51 DUF2688 PF10892.8 gi|568163912|ref|YP_008947341.1| - 0.0083 15.6 0.2 0.52 9.8 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF2688) Nudix_N_2 PF14803.6 gi|568163912|ref|YP_008947341.1| - 0.011 15.7 4.5 1 9.3 1.0 2.2 2 0 0 2 2 2 0 Nudix N-terminal Rubredoxin_2 PF18073.1 gi|568163912|ref|YP_008947341.1| - 0.012 15.4 8.1 0.15 11.8 1.4 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain HypA PF01155.19 gi|568163912|ref|YP_008947341.1| - 0.013 15.5 0.0 0.014 15.4 0.0 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA GFA PF04828.14 gi|568163912|ref|YP_008947341.1| - 0.013 15.8 0.3 0.52 10.7 0.0 2.1 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme DZR PF12773.7 gi|568163912|ref|YP_008947341.1| - 0.014 15.4 0.7 0.087 12.9 0.8 1.9 1 1 0 1 1 1 0 Double zinc ribbon DUF35_N PF12172.8 gi|568163912|ref|YP_008947341.1| - 0.027 14.3 1.0 1 9.3 0.1 2.1 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-ribbon_3 PF13248.6 gi|568163912|ref|YP_008947341.1| - 0.028 13.8 5.7 0.54 9.7 0.9 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf_UBZ PF18439.1 gi|568163912|ref|YP_008947341.1| - 0.058 13.0 1.3 0.88 9.2 0.1 2.1 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger Zn-ribbon_8 PF09723.10 gi|568163912|ref|YP_008947341.1| - 0.074 13.2 4.3 1.8 8.7 4.3 2.2 1 1 0 1 1 1 0 Zinc ribbon domain DUF2757 PF10955.8 gi|568163912|ref|YP_008947341.1| - 0.081 13.2 0.4 0.26 11.6 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2757) OrfB_Zn_ribbon PF07282.11 gi|568163912|ref|YP_008947341.1| - 0.085 12.8 0.3 7.5 6.6 0.1 2.1 2 0 0 2 2 2 0 Putative transposase DNA-binding domain zf_C2H2_13 PF18508.1 gi|568163912|ref|YP_008947341.1| - 0.15 11.7 3.8 0.44 10.2 0.4 2.2 2 0 0 2 2 2 0 Zinc finger domain TFIIS_C PF01096.18 gi|568163912|ref|YP_008947341.1| - 0.28 11.0 3.8 3 7.8 0.2 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zf-C2H2 PF00096.26 gi|568163912|ref|YP_008947341.1| - 0.3 11.6 3.8 11 6.7 0.1 2.2 2 0 0 2 2 2 0 Zinc finger, C2H2 type TF_Zn_Ribbon PF08271.12 gi|568163912|ref|YP_008947341.1| - 0.36 10.4 5.9 3 7.4 0.2 2.5 2 1 0 2 2 2 0 TFIIB zinc-binding ADK_lid PF05191.14 gi|568163912|ref|YP_008947341.1| - 0.47 10.5 4.3 2.9 8.0 4.3 2.0 1 1 0 1 1 1 0 Adenylate kinase, active site lid zf-HIT PF04438.16 gi|568163912|ref|YP_008947341.1| - 0.54 10.2 7.3 4.8 7.1 0.8 2.1 2 0 0 2 2 2 0 HIT zinc finger zf-FPG_IleRS PF06827.14 gi|568163912|ref|YP_008947341.1| - 0.83 9.6 6.2 0.6 10.0 1.3 2.4 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS Ogr_Delta PF04606.12 gi|568163912|ref|YP_008947341.1| - 0.96 9.5 4.3 7.8 6.6 0.2 2.2 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger Zn_Tnp_IS1595 PF12760.7 gi|568163912|ref|YP_008947341.1| - 2.4 8.2 5.9 8.9 6.4 1.1 2.2 1 1 1 2 2 2 0 Transposase zinc-ribbon domain adh_short PF00106.25 gi|568163913|ref|YP_008947342.1| - 2e-36 125.3 0.0 2.6e-36 124.9 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|568163913|ref|YP_008947342.1| - 4.7e-31 108.1 0.0 6.1e-31 107.8 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase DUF1776 PF08643.10 gi|568163913|ref|YP_008947342.1| - 0.088 12.2 0.0 0.12 11.7 0.0 1.2 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) TatD_DNase PF01026.21 gi|568163914|ref|YP_008947343.1| - 1e-35 123.4 0.0 2.3e-35 122.2 0.0 1.5 1 1 0 1 1 1 1 TatD related DNase Aminopep PF10023.9 gi|568163914|ref|YP_008947343.1| - 0.024 14.0 0.1 0.033 13.5 0.1 1.1 1 0 0 1 1 1 0 Putative aminopeptidase DUF3908 PF13048.6 gi|568164866|ref|YP_008947344.1| - 0.022 15.0 0.3 0.028 14.7 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3908) ABC_tran PF00005.27 gi|568163915|ref|YP_008947345.1| - 1.6e-28 100.0 0.0 2.1e-28 99.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|568163915|ref|YP_008947345.1| - 3.8e-13 49.9 0.7 1.7e-06 28.0 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|568163915|ref|YP_008947345.1| - 1.7e-05 24.4 1.0 0.0065 15.9 0.0 2.1 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|568163915|ref|YP_008947345.1| - 0.00031 20.6 0.4 0.34 10.6 0.1 2.1 2 0 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.6 gi|568163915|ref|YP_008947345.1| - 0.0033 17.1 0.1 0.0059 16.3 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|568163915|ref|YP_008947345.1| - 0.023 15.2 0.0 0.027 15.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|568163915|ref|YP_008947345.1| - 0.024 14.9 0.3 0.15 12.4 0.3 2.0 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|568163915|ref|YP_008947345.1| - 0.036 13.8 0.1 0.27 10.9 0.0 2.0 2 0 0 2 2 2 0 AAA domain MukB PF04310.12 gi|568163915|ref|YP_008947345.1| - 0.067 13.0 0.0 0.15 11.8 0.0 1.5 2 0 0 2 2 2 0 MukB N-terminal LDcluster4 PF18306.1 gi|568163916|ref|YP_008947347.1| - 2.1e-17 63.2 0.0 2.4e-17 63.0 0.0 1.1 1 0 0 1 1 1 1 SLOG cluster4 family Lysine_decarbox PF03641.14 gi|568163916|ref|YP_008947347.1| - 0.00012 22.1 0.0 0.00019 21.5 0.0 1.4 1 1 0 1 1 1 1 Possible lysine decarboxylase LSDAT_prok PF18171.1 gi|568163916|ref|YP_008947347.1| - 0.0012 18.2 0.0 0.0043 16.3 0.0 1.8 2 0 0 2 2 2 1 SLOG in TRPM, prokaryote Nuc_deoxyrib_tr PF05014.15 gi|568163916|ref|YP_008947347.1| - 0.011 15.8 0.0 0.018 15.0 0.0 1.4 1 0 0 1 1 1 0 Nucleoside 2-deoxyribosyltransferase Rib_5-P_isom_A PF06026.14 gi|568163917|ref|YP_008947348.1| - 6.1e-42 143.2 0.6 7.4e-42 142.9 0.6 1.1 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Sugar-bind PF04198.13 gi|568163917|ref|YP_008947348.1| - 0.0011 18.1 0.0 0.0016 17.6 0.0 1.2 1 0 0 1 1 1 1 Putative sugar-binding domain FRD2 PF03197.13 gi|568164868|ref|YP_008947349.1| - 0.1 12.9 0.0 2 8.7 0.0 2.3 2 0 0 2 2 2 0 Bacteriophage FRD2 protein HMGL-like PF00682.19 gi|568163918|ref|YP_008947350.1| - 7e-72 242.1 2.9 9.4e-72 241.7 2.9 1.2 1 0 0 1 1 1 1 HMGL-like AsnC_trans_reg PF01037.21 gi|568163918|ref|YP_008947350.1| - 8.4e-15 54.5 1.0 2.6e-13 49.7 0.4 3.1 3 0 0 3 3 3 1 Lrp/AsnC ligand binding domain ACT_4 PF13291.6 gi|568163918|ref|YP_008947350.1| - 0.00015 22.3 3.3 0.015 15.9 0.2 4.2 4 0 0 4 4 4 1 ACT domain AP_endonuc_2 PF01261.24 gi|568163918|ref|YP_008947350.1| - 0.0018 17.8 0.3 0.0058 16.1 0.3 1.9 1 1 0 1 1 1 1 Xylose isomerase-like TIM barrel NapD PF03927.13 gi|568163918|ref|YP_008947350.1| - 0.002 18.1 0.5 0.015 15.3 0.5 2.5 2 0 0 2 2 2 1 NapD protein CinA_KH PF18146.1 gi|568163918|ref|YP_008947350.1| - 0.0052 16.9 0.3 0.028 14.6 0.1 2.4 2 0 0 2 2 2 1 Damage-inducible protein CinA KH domain FtsX_ECD PF18075.1 gi|568163918|ref|YP_008947350.1| - 0.035 14.7 2.1 30 5.3 0.0 3.8 3 1 0 3 3 3 0 FtsX extracellular domain OmpA_membrane PF01389.17 gi|568163918|ref|YP_008947350.1| - 0.042 13.6 0.0 0.095 12.4 0.0 1.6 1 0 0 1 1 1 0 OmpA-like transmembrane domain Glyco_hydro_97 PF10566.9 gi|568163918|ref|YP_008947350.1| - 0.058 12.7 0.1 0.092 12.0 0.1 1.2 1 0 0 1 1 1 0 Glycoside hydrolase 97 ExbD PF02472.16 gi|568163918|ref|YP_008947350.1| - 0.15 12.3 0.3 0.44 10.7 0.1 1.9 2 0 0 2 2 2 0 Biopolymer transport protein ExbD/TolR SurA_N_2 PF13623.6 gi|568163918|ref|YP_008947350.1| - 0.16 11.8 0.0 0.28 11.0 0.0 1.3 1 0 0 1 1 1 0 SurA N-terminal domain Ca_bind_SSO6904 PF18249.1 gi|568163919|ref|YP_008947351.1| - 8.9e-42 141.4 6.3 9.8e-42 141.2 6.3 1.0 1 0 0 1 1 1 1 Calcium binding protein SSO6904 DUF2513 PF10711.9 gi|568163919|ref|YP_008947351.1| - 0.0046 17.2 0.2 0.0055 17.0 0.2 1.2 1 0 0 1 1 1 1 Hypothetical protein (DUF2513) IL31 PF15209.6 gi|568163919|ref|YP_008947351.1| - 0.03 14.1 0.2 0.031 14.0 0.2 1.2 1 0 0 1 1 1 0 Interleukin 31 AA_kinase PF00696.28 gi|568163920|ref|YP_008947352.1| - 6.4e-28 98.0 0.3 2e-27 96.3 0.3 1.7 1 1 0 1 1 1 1 Amino acid kinase family Cren7 PF11520.8 gi|568163921|ref|YP_008947353.1| - 4.7e-30 103.3 2.3 5e-30 103.2 2.3 1.0 1 0 0 1 1 1 1 Chromatin protein Cren7 adh_short_C2 PF13561.6 gi|568163922|ref|YP_008947354.1| - 7.7e-37 127.1 0.0 1.1e-36 126.6 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|568163922|ref|YP_008947354.1| - 9.7e-36 123.1 0.0 1.1e-35 122.8 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|568163922|ref|YP_008947354.1| - 2.7e-05 24.2 0.0 4.1e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 KR domain Shikimate_DH PF01488.20 gi|568163922|ref|YP_008947354.1| - 0.022 14.8 0.0 0.041 14.0 0.0 1.3 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase THUMP PF02926.17 gi|568163923|ref|YP_008947355.1| - 1.9e-08 34.5 0.9 2.5e-08 34.1 0.1 1.6 2 0 0 2 2 2 1 THUMP domain SRP54 PF00448.22 gi|568163924|ref|YP_008947356.1| - 1.7e-69 233.4 0.0 2.6e-69 232.8 0.0 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.19 gi|568163924|ref|YP_008947356.1| - 1.4e-29 102.6 1.4 8e-29 100.2 0.5 2.5 3 0 0 3 3 2 1 Signal peptide binding domain SRP54_N PF02881.19 gi|568163924|ref|YP_008947356.1| - 4.4e-15 55.7 0.5 4.4e-15 55.7 0.5 2.5 3 0 0 3 3 3 1 SRP54-type protein, helical bundle domain CbiA PF01656.23 gi|568163924|ref|YP_008947356.1| - 1.7e-05 24.9 0.0 0.00014 22.0 0.0 2.5 2 1 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|568163924|ref|YP_008947356.1| - 0.00011 21.8 0.0 0.00018 21.0 0.0 1.3 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase cobW PF02492.19 gi|568163924|ref|YP_008947356.1| - 0.00033 20.3 0.2 0.002 17.8 0.2 2.2 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_30 PF13604.6 gi|568163924|ref|YP_008947356.1| - 0.0013 18.5 0.2 0.0054 16.5 0.1 2.0 2 1 0 2 2 2 1 AAA domain PFOR_II PF17147.4 gi|568163924|ref|YP_008947356.1| - 0.0027 18.0 0.1 1.6 9.0 0.0 3.4 3 0 0 3 3 3 1 Pyruvate:ferredoxin oxidoreductase core domain II AAA_22 PF13401.6 gi|568163924|ref|YP_008947356.1| - 0.004 17.4 0.0 0.014 15.7 0.0 1.9 1 0 0 1 1 1 1 AAA domain AAA_31 PF13614.6 gi|568163924|ref|YP_008947356.1| - 0.0042 17.0 0.2 0.013 15.4 0.2 1.9 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|568163924|ref|YP_008947356.1| - 0.0043 17.5 0.8 0.022 15.2 0.1 2.5 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|568163924|ref|YP_008947356.1| - 0.0058 16.8 0.0 0.015 15.5 0.0 1.7 1 0 0 1 1 1 1 AAA domain MeaB PF03308.16 gi|568163924|ref|YP_008947356.1| - 0.0067 15.4 0.0 0.017 14.2 0.0 1.6 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB MobB PF03205.14 gi|568163924|ref|YP_008947356.1| - 0.0067 16.3 0.3 0.02 14.8 0.3 1.8 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B G-alpha PF00503.20 gi|568163924|ref|YP_008947356.1| - 0.0095 15.1 0.0 0.022 13.9 0.0 1.4 1 1 0 1 1 1 1 G-protein alpha subunit AAA_18 PF13238.6 gi|568163924|ref|YP_008947356.1| - 0.011 16.3 0.5 0.035 14.7 0.0 2.1 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 gi|568163924|ref|YP_008947356.1| - 0.013 14.8 0.0 0.027 13.7 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin TrbI_Ftype PF09677.10 gi|568163924|ref|YP_008947356.1| - 0.023 15.0 0.1 0.053 13.8 0.1 1.6 1 0 0 1 1 1 0 Type-F conjugative transfer system protein (TrbI_Ftype) ATP_bind_1 PF03029.17 gi|568163924|ref|YP_008947356.1| - 0.041 13.7 0.1 0.18 11.6 0.0 2.1 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein ResIII PF04851.15 gi|568163924|ref|YP_008947356.1| - 0.054 13.5 2.4 0.14 12.1 0.2 2.5 2 1 0 2 2 2 0 Type III restriction enzyme, res subunit AAA_28 PF13521.6 gi|568163924|ref|YP_008947356.1| - 0.18 12.0 0.0 0.32 11.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain eIF-5a PF01287.20 gi|568163925|ref|YP_008947357.1| - 8.5e-09 35.4 0.1 1.5e-08 34.6 0.1 1.5 1 0 0 1 1 1 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold EFP_N PF08207.12 gi|568163925|ref|YP_008947357.1| - 6.9e-07 29.2 0.0 2.8e-06 27.2 0.0 1.9 2 0 0 2 2 2 1 Elongation factor P (EF-P) KOW-like domain EFP PF01132.20 gi|568163925|ref|YP_008947357.1| - 0.031 14.3 0.1 0.069 13.2 0.1 1.6 1 0 0 1 1 1 0 Elongation factor P (EF-P) OB domain TP6A_N PF04406.14 gi|568163926|ref|YP_008947359.1| - 1.1e-20 73.4 0.1 1.8e-20 72.7 0.1 1.4 1 0 0 1 1 1 1 Type IIB DNA topoisomerase GTP_EFTU_D4 PF14578.6 gi|568163926|ref|YP_008947359.1| - 0.074 13.0 0.1 0.14 12.1 0.1 1.4 1 0 0 1 1 1 0 Elongation factor Tu domain 4 DUF2399 PF09664.10 gi|568163926|ref|YP_008947359.1| - 0.17 11.8 0.0 0.32 10.9 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function C-terminus (DUF2399) Topo-VIb_trans PF09239.11 gi|568163927|ref|YP_008947360.1| - 7.7e-65 217.6 0.5 1.6e-64 216.5 0.5 1.6 1 0 0 1 1 1 1 Topoisomerase VI B subunit, transducer HATPase_c_3 PF13589.6 gi|568163927|ref|YP_008947360.1| - 7.1e-11 42.1 0.0 1.5e-10 41.0 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 gi|568163927|ref|YP_008947360.1| - 1.8e-09 38.0 0.0 3.2e-09 37.3 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FbpA PF05833.11 gi|568163927|ref|YP_008947360.1| - 1.9e-05 23.6 0.0 1.9e-05 23.6 0.0 2.0 2 0 0 2 2 2 1 Fibronectin-binding protein A N-terminus (FbpA) Ribosomal_S13 PF00416.22 gi|568163927|ref|YP_008947360.1| - 0.00091 19.6 0.0 0.00091 19.6 0.0 2.2 3 0 0 3 3 3 1 Ribosomal protein S13/S18 OTCace_N PF02729.21 gi|568163927|ref|YP_008947360.1| - 1.4 9.0 3.2 44 4.1 0.0 2.9 2 1 1 3 3 3 0 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DS PF01916.17 gi|568163928|ref|YP_008947361.1| - 6.8e-101 337.3 0.0 8.4e-101 337.0 0.0 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase RtcB PF01139.17 gi|568163929|ref|YP_008947362.1| - 3e-162 540.5 0.5 3.4e-162 540.3 0.5 1.0 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB YonK PF09642.10 gi|568163930|ref|YP_008947363.1| - 0.0036 17.4 2.4 0.019 15.1 1.6 2.0 2 0 0 2 2 2 1 YonK protein YHS PF04945.13 gi|568163930|ref|YP_008947363.1| - 0.0037 17.3 0.5 0.01 15.9 0.1 2.0 2 0 0 2 2 2 1 YHS domain DEAD PF00270.29 gi|568163931|ref|YP_008947364.1| - 5e-30 104.6 0.0 2.8e-29 102.1 0.0 2.2 3 0 0 3 3 3 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|568163931|ref|YP_008947364.1| - 2.6e-16 60.0 0.1 1.3e-14 54.5 0.0 3.3 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|568163931|ref|YP_008947364.1| - 3.6e-08 33.6 0.1 3.2e-07 30.5 0.0 2.3 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD_assoc PF08494.11 gi|568163931|ref|YP_008947364.1| - 3.8e-08 33.4 0.0 0.00011 22.1 0.0 2.5 1 1 1 2 2 2 2 DEAD/H associated SNF2_N PF00176.23 gi|568163931|ref|YP_008947364.1| - 0.0013 17.5 0.0 0.0022 16.8 0.0 1.3 1 0 0 1 1 1 1 SNF2 family N-terminal domain HTH_5 PF01022.20 gi|568163931|ref|YP_008947364.1| - 0.0042 16.9 0.2 0.017 15.0 0.0 2.2 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 gi|568163931|ref|YP_008947364.1| - 0.02 14.5 0.1 0.084 12.5 0.0 2.2 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding AAA_19 PF13245.6 gi|568163931|ref|YP_008947364.1| - 0.068 13.5 0.0 0.33 11.3 0.0 2.1 2 0 0 2 2 2 0 AAA domain Fe_dep_repress PF01325.19 gi|568163931|ref|YP_008947364.1| - 0.094 12.9 0.1 8.5 6.7 0.1 2.7 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain HTH_AsnC-type PF13404.6 gi|568163931|ref|YP_008947364.1| - 0.11 12.3 0.0 0.28 11.1 0.0 1.7 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain Glyco_transf_4 PF13439.6 gi|568163931|ref|YP_008947364.1| - 0.11 12.4 0.0 5.3 7.0 0.0 2.5 2 0 0 2 2 2 0 Glycosyltransferase Family 4 HTH_28 PF13518.6 gi|568163931|ref|YP_008947364.1| - 0.14 12.3 0.0 0.54 10.4 0.0 2.1 1 0 0 1 1 1 0 Helix-turn-helix domain Alba PF01918.21 gi|568163932|ref|YP_008947365.1| - 6.6e-14 51.5 0.5 8.6e-14 51.1 0.5 1.2 1 0 0 1 1 1 1 Alba DUF5077 PF16871.5 gi|568163932|ref|YP_008947365.1| - 0.066 13.1 0.1 0.066 13.1 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5077) Topoisom_bac PF01131.20 gi|568163933|ref|YP_008947366.1| - 4.9e-71 239.9 0.1 9.3e-71 239.0 0.1 1.5 1 0 0 1 1 1 1 DNA topoisomerase Toprim PF01751.22 gi|568163933|ref|YP_008947366.1| - 1.9e-23 82.6 0.1 7.6e-23 80.7 0.1 2.1 1 0 0 1 1 1 1 Toprim domain zf_Rg PF17915.1 gi|568163933|ref|YP_008947366.1| - 1.6e-11 43.4 0.8 1.6e-11 43.4 0.8 2.0 2 0 0 2 2 2 1 Reverse gyrase zinc finger DEAD PF00270.29 gi|568163933|ref|YP_008947366.1| - 1.3e-08 34.9 0.2 8.1e-08 32.2 0.2 2.4 1 1 0 1 1 1 1 DEAD/DEAH box helicase zinc_ribbon_2 PF13240.6 gi|568163933|ref|YP_008947366.1| - 9.3e-05 22.0 0.9 9.3e-05 22.0 0.9 2.3 2 0 0 2 2 2 1 zinc-ribbon domain ResIII PF04851.15 gi|568163933|ref|YP_008947366.1| - 9.5e-05 22.5 0.2 0.0003 20.8 0.0 2.0 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit Toprim_4 PF13662.6 gi|568163933|ref|YP_008947366.1| - 0.00085 19.7 0.0 0.0035 17.8 0.0 2.1 1 0 0 1 1 1 1 Toprim domain zf-ribbon_3 PF13248.6 gi|568163933|ref|YP_008947366.1| - 0.0015 17.8 1.6 0.0015 17.8 1.6 2.3 2 0 0 2 2 2 1 zinc-ribbon domain HypA PF01155.19 gi|568163933|ref|YP_008947366.1| - 0.0039 17.2 0.5 0.072 13.1 0.1 2.5 2 0 0 2 2 2 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 gi|568163933|ref|YP_008947366.1| - 0.0042 17.1 0.1 0.0042 17.1 0.1 2.1 2 0 0 2 2 2 1 Double zinc ribbon zf-C2HC5 PF06221.13 gi|568163933|ref|YP_008947366.1| - 0.0053 16.7 0.8 0.013 15.4 0.8 1.6 1 0 0 1 1 1 1 Putative zinc finger motif, C2HC5-type Helicase_C PF00271.31 gi|568163933|ref|YP_008947366.1| - 0.011 16.1 0.6 1.1 9.7 0.0 4.3 4 1 1 5 5 5 0 Helicase conserved C-terminal domain zinc_ribbon_15 PF17032.5 gi|568163933|ref|YP_008947366.1| - 0.062 14.1 0.2 0.062 14.1 0.2 2.1 2 0 0 2 2 2 0 zinc-ribbon family BNR_6 PF15899.5 gi|568163933|ref|YP_008947366.1| - 0.081 13.0 0.8 0.19 11.9 0.0 2.2 2 0 0 2 2 1 0 BNR-Asp box repeat zf-C3HC4_3 PF13920.6 gi|568163933|ref|YP_008947366.1| - 0.14 12.1 2.2 0.32 10.9 0.6 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zinc-ribbons_6 PF07191.12 gi|568163933|ref|YP_008947366.1| - 0.15 12.0 2.1 1.9 8.5 0.2 2.4 2 0 0 2 2 2 0 zinc-ribbons Zn-ribbon_8 PF09723.10 gi|568163933|ref|YP_008947366.1| - 0.18 11.9 4.3 0.48 10.6 0.7 2.5 2 0 0 2 2 2 0 Zinc ribbon domain Alba PF01918.21 gi|568163934|ref|YP_008947367.1| - 1.1e-22 79.6 0.6 1.4e-22 79.2 0.6 1.2 1 0 0 1 1 1 1 Alba DUF3954 PF13128.6 gi|568163934|ref|YP_008947367.1| - 0.092 12.6 0.6 0.26 11.1 0.3 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3954) Pre-PUA PF17832.1 gi|568163937|ref|YP_008947370.1| - 0.055 14.2 0.1 0.11 13.2 0.1 1.5 1 0 0 1 1 1 0 Pre-PUA-like domain ResIII PF04851.15 gi|568163938|ref|YP_008947371.1| - 3.2e-24 85.9 0.1 3.2e-24 85.9 0.1 2.5 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit ERCC3_RAD25_C PF16203.5 gi|568163938|ref|YP_008947371.1| - 4.2e-24 85.1 0.6 9.2e-24 84.0 0.1 1.7 1 1 1 2 2 2 1 ERCC3/RAD25/XPB C-terminal helicase Helicase_C PF00271.31 gi|568163938|ref|YP_008947371.1| - 1.2e-18 67.4 1.0 2.7e-18 66.3 0.2 2.1 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.29 gi|568163938|ref|YP_008947371.1| - 6.9e-10 39.0 0.6 2.7e-08 33.8 0.0 2.8 2 1 0 2 2 2 1 DEAD/DEAH box helicase SNF2_N PF00176.23 gi|568163938|ref|YP_008947371.1| - 7.6e-05 21.6 0.5 0.00096 18.0 0.5 2.1 1 1 0 1 1 1 1 SNF2 family N-terminal domain AAA_22 PF13401.6 gi|568163938|ref|YP_008947371.1| - 0.0018 18.6 0.7 0.012 15.9 0.2 2.6 3 1 0 3 3 3 1 AAA domain Helicase_RecD PF05127.14 gi|568163938|ref|YP_008947371.1| - 0.0019 18.1 0.0 0.0041 17.0 0.0 1.6 1 0 0 1 1 1 1 Helicase DUF2075 PF09848.9 gi|568163938|ref|YP_008947371.1| - 0.0021 17.4 0.0 0.0053 16.1 0.0 1.6 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) IstB_IS21 PF01695.17 gi|568163938|ref|YP_008947371.1| - 0.024 14.4 0.0 3.8 7.2 0.0 2.5 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_30 PF13604.6 gi|568163938|ref|YP_008947371.1| - 0.086 12.5 0.0 0.45 10.2 0.0 2.2 2 1 0 2 2 2 0 AAA domain AAA_11 PF13086.6 gi|568163938|ref|YP_008947371.1| - 0.18 11.6 1.2 5.3 6.8 0.0 2.8 2 1 1 3 3 3 0 AAA domain CutA1 PF03091.15 gi|568163940|ref|YP_008947373.1| - 1.2e-35 121.3 0.5 1.4e-35 121.1 0.5 1.0 1 0 0 1 1 1 1 CutA1 divalent ion tolerance protein HisK_N PF09385.10 gi|568163940|ref|YP_008947373.1| - 0.043 13.8 0.6 0.093 12.7 0.1 1.6 1 1 1 2 2 2 0 Histidine kinase N terminal PDH PF02153.17 gi|568163940|ref|YP_008947373.1| - 0.063 12.3 0.0 0.073 12.1 0.0 1.1 1 0 0 1 1 1 0 Prephenate dehydrogenase Glu-tRNAGln PF02686.15 gi|568163941|ref|YP_008947374.1| - 2.2e-18 66.3 0.2 3e-18 65.9 0.2 1.2 1 0 0 1 1 1 1 Glu-tRNAGln amidotransferase C subunit AF0941-like PF14591.6 gi|568163941|ref|YP_008947374.1| - 0.00078 20.0 1.0 0.00089 19.8 1.0 1.1 1 0 0 1 1 1 1 AF0941-like Amidase PF01425.21 gi|568163942|ref|YP_008947375.1| - 1.1e-142 476.2 0.0 1.2e-142 476.1 0.0 1.0 1 0 0 1 1 1 1 Amidase Wyosine_form PF08608.12 gi|568163943|ref|YP_008947376.1| - 4.4e-22 78.2 0.0 1e-21 77.0 0.0 1.7 1 0 0 1 1 1 1 Wyosine base formation Radical_SAM PF04055.21 gi|568163943|ref|YP_008947376.1| - 1.8e-21 77.3 0.0 3.6e-21 76.3 0.0 1.4 1 1 0 1 1 1 1 Radical SAM superfamily CTP-dep_RFKase PF01982.16 gi|568163944|ref|YP_008947377.1| - 2.7e-39 134.0 0.0 4.1e-39 133.4 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF120 HTH_24 PF13412.6 gi|568163944|ref|YP_008947377.1| - 7.7e-08 31.8 0.2 1.5e-07 30.8 0.2 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_Crp_2 PF13545.6 gi|568163944|ref|YP_008947377.1| - 1.8e-07 31.1 0.2 5.7e-07 29.4 0.2 1.8 2 0 0 2 2 1 1 Crp-like helix-turn-helix domain MarR PF01047.22 gi|568163944|ref|YP_008947377.1| - 4.1e-06 26.6 0.2 7.5e-06 25.8 0.2 1.4 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 gi|568163944|ref|YP_008947377.1| - 2.1e-05 24.5 0.1 7.6e-05 22.7 0.0 1.9 1 1 1 2 2 2 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|568163944|ref|YP_008947377.1| - 2.4e-05 24.1 0.0 4.4e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_1 PF00126.27 gi|568163944|ref|YP_008947377.1| - 4.7e-05 23.3 0.1 8e-05 22.5 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HxlR PF01638.17 gi|568163944|ref|YP_008947377.1| - 0.00011 22.0 0.2 0.00018 21.3 0.2 1.3 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_DeoR PF08220.12 gi|568163944|ref|YP_008947377.1| - 0.00018 21.1 0.1 0.00038 20.2 0.1 1.5 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_5 PF01022.20 gi|568163944|ref|YP_008947377.1| - 0.00031 20.5 0.1 0.00074 19.3 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family RepL PF05732.11 gi|568163944|ref|YP_008947377.1| - 0.00052 19.5 0.4 0.00079 18.9 0.4 1.2 1 0 0 1 1 1 1 Firmicute plasmid replication protein (RepL) HTH_8 PF02954.19 gi|568163944|ref|YP_008947377.1| - 0.00056 19.6 0.0 0.0015 18.3 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family DUF4364 PF14277.6 gi|568163944|ref|YP_008947377.1| - 0.00096 18.9 0.2 0.0014 18.4 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4364) HTH_36 PF13730.6 gi|568163944|ref|YP_008947377.1| - 0.001 19.0 0.1 0.0023 17.8 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.12 gi|568163944|ref|YP_008947377.1| - 0.0025 17.7 0.3 0.0055 16.6 0.3 1.6 1 0 0 1 1 1 1 HTH domain TrmB PF01978.19 gi|568163944|ref|YP_008947377.1| - 0.0027 17.5 0.1 0.0072 16.2 0.1 1.7 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Fe_dep_repress PF01325.19 gi|568163944|ref|YP_008947377.1| - 0.0037 17.4 0.0 0.0082 16.3 0.0 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain DDRGK PF09756.9 gi|568163944|ref|YP_008947377.1| - 0.0044 16.6 0.7 0.0062 16.1 0.7 1.2 1 0 0 1 1 1 1 DDRGK domain GntR PF00392.21 gi|568163944|ref|YP_008947377.1| - 0.0047 16.6 0.1 0.012 15.3 0.1 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_45 PF14947.6 gi|568163944|ref|YP_008947377.1| - 0.0049 16.8 0.6 0.0085 16.1 0.6 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DUF1670 PF07900.11 gi|568163944|ref|YP_008947377.1| - 0.0083 15.5 0.1 0.016 14.6 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1670) MazE_antitoxin PF04014.18 gi|568163944|ref|YP_008947377.1| - 0.011 15.7 1.5 0.052 13.5 0.2 2.7 2 1 0 2 2 2 0 Antidote-toxin recognition MazE, bacterial antitoxin Sigma70_r4 PF04545.16 gi|568163944|ref|YP_008947377.1| - 0.012 15.1 0.1 0.025 14.1 0.1 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 YdaS_antitoxin PF15943.5 gi|568163944|ref|YP_008947377.1| - 0.022 14.6 0.0 0.04 13.8 0.0 1.4 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT DUF2250 PF10007.9 gi|568163944|ref|YP_008947377.1| - 0.026 14.6 0.3 0.078 13.1 0.3 1.7 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) Crp PF00325.20 gi|568163944|ref|YP_008947377.1| - 0.026 14.1 0.0 0.076 12.7 0.0 1.8 1 0 0 1 1 1 0 Bacterial regulatory proteins, crp family HTH_CodY PF08222.11 gi|568163944|ref|YP_008947377.1| - 0.027 14.0 0.1 0.053 13.1 0.1 1.5 1 0 0 1 1 1 0 CodY helix-turn-helix domain HTH_50 PF18024.1 gi|568163944|ref|YP_008947377.1| - 0.027 14.1 0.0 0.056 13.1 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_10 PF04967.12 gi|568163944|ref|YP_008947377.1| - 0.029 14.2 0.1 0.058 13.2 0.1 1.5 1 0 0 1 1 1 0 HTH DNA binding domain HTH_23 PF13384.6 gi|568163944|ref|YP_008947377.1| - 0.034 14.0 0.0 0.072 12.9 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain HTH_AsnC-type PF13404.6 gi|568163944|ref|YP_008947377.1| - 0.035 13.9 0.0 0.065 13.1 0.0 1.4 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_3 PF01381.22 gi|568163944|ref|YP_008947377.1| - 0.036 14.1 0.2 0.078 13.1 0.2 1.5 1 0 0 1 1 1 0 Helix-turn-helix FUR PF01475.19 gi|568163944|ref|YP_008947377.1| - 0.036 14.2 0.1 0.058 13.5 0.1 1.3 1 0 0 1 1 1 0 Ferric uptake regulator family pXO2-72 PF17443.2 gi|568163944|ref|YP_008947377.1| - 0.049 13.9 0.1 0.087 13.1 0.1 1.4 1 0 0 1 1 1 0 Uncharacterized protein pXO2-72 HTH_34 PF13601.6 gi|568163944|ref|YP_008947377.1| - 0.086 13.0 0.1 0.54 10.5 0.2 2.0 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_38 PF13936.6 gi|568163944|ref|YP_008947377.1| - 0.1 12.4 0.0 0.29 10.9 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain FaeA PF04703.12 gi|568163944|ref|YP_008947377.1| - 0.13 12.7 0.0 0.22 11.9 0.0 1.3 1 0 0 1 1 1 0 FaeA-like protein HTH_29 PF13551.6 gi|568163944|ref|YP_008947377.1| - 0.14 12.2 0.0 0.29 11.2 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn helix Phage_rep_O PF04492.13 gi|568163944|ref|YP_008947377.1| - 0.17 12.5 0.1 0.31 11.7 0.1 1.5 1 0 0 1 1 1 0 Bacteriophage replication protein O DUF357 PF04010.13 gi|568163945|ref|YP_008947378.1| - 5e-16 58.5 0.4 1.1e-15 57.4 0.1 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF357) CTP_transf_like PF01467.26 gi|568163945|ref|YP_008947378.1| - 2.3e-14 53.8 0.1 5.2e-14 52.6 0.0 1.6 2 0 0 2 2 2 1 Cytidylyltransferase-like Lambda_Kil PF06301.11 gi|568163945|ref|YP_008947378.1| - 0.028 14.0 0.0 0.076 12.6 0.0 1.7 2 0 0 2 2 2 0 Bacteriophage lambda Kil protein Urm1 PF09138.11 gi|568163945|ref|YP_008947378.1| - 0.069 13.5 0.9 0.15 12.4 0.2 1.9 2 1 0 2 2 2 0 Urm1 (Ubiquitin related modifier) FAD_syn PF06574.12 gi|568163945|ref|YP_008947378.1| - 0.11 12.4 0.1 0.71 9.7 0.1 2.3 2 1 0 2 2 2 0 FAD synthetase Intron_maturas2 PF01348.21 gi|568163945|ref|YP_008947378.1| - 0.16 11.9 1.9 0.17 11.8 0.1 1.8 2 0 0 2 2 2 0 Type II intron maturase TP_methylase PF00590.20 gi|568163946|ref|YP_008947379.1| - 1.1e-22 81.1 0.0 1.3e-22 80.9 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases DUF1894 PF08979.11 gi|568163946|ref|YP_008947379.1| - 0.11 12.8 0.3 2.8 8.3 0.1 2.8 2 2 1 3 3 3 0 Domain of unknown function (DUF1894) Metallophos PF00149.28 gi|568163947|ref|YP_008947380.1| - 1.8e-07 31.8 0.7 5e-07 30.4 0.7 1.8 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|568163947|ref|YP_008947380.1| - 1.4e-06 28.6 0.1 1.7e-06 28.3 0.1 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Ribosomal_L4 PF00573.22 gi|568163947|ref|YP_008947380.1| - 0.06 13.0 0.6 0.092 12.4 0.6 1.3 1 0 0 1 1 1 0 Ribosomal protein L4/L1 family DpaA_N PF16924.5 gi|568163947|ref|YP_008947380.1| - 0.074 13.1 0.3 4.4 7.4 0.1 2.7 2 1 1 3 3 3 0 Dipicolinate synthase subunit A N-terminal domain TBP PF00352.21 gi|568163948|ref|YP_008947381.1| - 1.6e-53 178.6 0.3 1.8e-29 101.5 0.1 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.8 gi|568163948|ref|YP_008947381.1| - 7.8e-07 29.1 0.0 0.02 15.0 0.0 2.5 1 1 2 3 3 3 2 Domain of unknown function (DUF3378) NMT1_3 PF16868.5 gi|568163948|ref|YP_008947381.1| - 0.0094 15.4 0.0 0.011 15.2 0.0 1.1 1 0 0 1 1 1 1 NMT1-like family DUF155 PF02582.14 gi|568163948|ref|YP_008947381.1| - 0.028 14.5 0.3 7.9 6.5 0.0 2.2 2 0 0 2 2 2 0 Uncharacterised ACR, YagE family COG1723 DRTGG PF07085.12 gi|568163948|ref|YP_008947381.1| - 0.03 14.1 0.1 1.7 8.4 0.0 2.2 1 1 1 2 2 2 0 DRTGG domain DUF5622 PF18533.1 gi|568163949|ref|YP_008947382.1| - 1.4e-26 92.5 4.2 1.5e-26 92.3 4.2 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF5622) DUF373 PF04123.13 gi|568163950|ref|YP_008947383.1| - 1.7e-85 287.4 23.4 2.1e-85 287.1 23.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF373) NPCC PF08058.11 gi|568163950|ref|YP_008947383.1| - 4 7.5 5.7 3.3 7.8 0.6 2.3 2 0 0 2 2 2 0 Nuclear pore complex component Gar1 PF04410.14 gi|568163951|ref|YP_008947384.1| - 0.0037 17.1 0.0 0.004 16.9 0.0 1.2 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region TFIIB PF00382.19 gi|568163952|ref|YP_008947385.1| - 7.5e-23 80.4 0.3 4.7e-14 52.2 0.0 2.4 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|568163952|ref|YP_008947385.1| - 1.8e-14 53.0 0.5 2.9e-14 52.3 0.5 1.4 1 0 0 1 1 1 1 TFIIB zinc-binding A2L_zn_ribbon PF08792.10 gi|568163952|ref|YP_008947385.1| - 0.0002 21.0 1.7 0.00046 19.8 1.7 1.6 1 0 0 1 1 1 1 A2L zinc ribbon domain Sigma70_r4 PF04545.16 gi|568163952|ref|YP_008947385.1| - 0.0017 17.8 1.1 0.0034 16.9 0.1 2.1 2 0 0 2 2 2 1 Sigma-70, region 4 Ribosomal_S27e PF01667.17 gi|568163952|ref|YP_008947385.1| - 0.0053 16.4 0.2 0.0097 15.6 0.2 1.4 1 0 0 1 1 1 1 Ribosomal protein S27 Sigma70_r4_2 PF08281.12 gi|568163952|ref|YP_008947385.1| - 0.015 15.0 0.2 0.046 13.4 0.2 1.8 1 0 0 1 1 1 0 Sigma-70, region 4 MA3 PF02847.17 gi|568163952|ref|YP_008947385.1| - 0.018 15.0 0.2 0.12 12.3 0.2 2.2 1 1 1 2 2 2 0 MA3 domain GerE PF00196.19 gi|568163952|ref|YP_008947385.1| - 0.039 13.5 2.5 0.058 12.9 0.1 2.3 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family HTH_11 PF08279.12 gi|568163952|ref|YP_008947385.1| - 0.071 13.1 0.2 0.21 11.5 0.2 1.9 1 0 0 1 1 1 0 HTH domain DUF2089 PF09862.9 gi|568163952|ref|YP_008947385.1| - 0.078 13.0 0.7 0.23 11.5 0.1 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF2089) HTH_23 PF13384.6 gi|568163952|ref|YP_008947385.1| - 0.094 12.5 0.0 0.29 11.0 0.0 1.8 1 0 0 1 1 1 0 Homeodomain-like domain Terminase_5 PF06056.12 gi|568163952|ref|YP_008947385.1| - 0.56 10.1 2.3 5 7.1 0.0 2.9 3 0 0 3 3 3 0 Putative ATPase subunit of terminase (gpP-like) RNA_pol_Rpc34 PF05158.12 gi|568163953|ref|YP_008947386.1| - 2.2e-11 43.7 4.1 1.8e-08 34.2 1.5 2.0 1 1 1 2 2 2 2 RNA polymerase Rpc34 subunit B-block_TFIIIC PF04182.12 gi|568163953|ref|YP_008947386.1| - 8.2e-05 22.7 0.3 0.00014 21.9 0.3 1.4 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC HTH_24 PF13412.6 gi|568163953|ref|YP_008947386.1| - 0.00092 18.7 0.1 0.0017 17.9 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding DUF2963 PF11178.8 gi|568163953|ref|YP_008947386.1| - 0.031 14.0 2.2 0.059 13.1 2.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2963) TRM PF02005.16 gi|568163954|ref|YP_008947387.1| - 2.6e-86 290.2 0.6 2.9e-86 290.0 0.6 1.0 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Met_10 PF02475.16 gi|568163954|ref|YP_008947387.1| - 0.0077 16.0 0.0 0.011 15.5 0.0 1.3 1 0 0 1 1 1 1 Met-10+ like-protein OrfB_Zn_ribbon PF07282.11 gi|568163954|ref|YP_008947387.1| - 0.012 15.6 0.4 0.028 14.3 0.4 1.7 1 0 0 1 1 1 0 Putative transposase DNA-binding domain MTS PF05175.14 gi|568163954|ref|YP_008947387.1| - 0.014 14.9 0.1 0.037 13.6 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase small domain Methyltransf_16 PF10294.9 gi|568163954|ref|YP_008947387.1| - 0.019 14.7 0.0 0.035 13.8 0.0 1.4 1 0 0 1 1 1 0 Lysine methyltransferase HypA PF01155.19 gi|568163954|ref|YP_008947387.1| - 0.019 15.0 0.1 0.038 14.0 0.1 1.5 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DNA_methylase PF00145.17 gi|568163954|ref|YP_008947387.1| - 0.035 13.5 0.4 0.076 12.3 0.0 1.6 2 0 0 2 2 2 0 C-5 cytosine-specific DNA methylase Zn-ribbon_8 PF09723.10 gi|568163954|ref|YP_008947387.1| - 0.044 13.9 4.8 0.093 12.9 4.8 1.5 1 0 0 1 1 1 0 Zinc ribbon domain zf-CSL PF05207.13 gi|568163954|ref|YP_008947387.1| - 0.097 12.4 0.7 0.22 11.3 0.7 1.6 1 0 0 1 1 1 0 CSL zinc finger zinc-ribbons_6 PF07191.12 gi|568163954|ref|YP_008947387.1| - 0.11 12.5 0.5 0.29 11.1 0.5 1.7 1 0 0 1 1 1 0 zinc-ribbons PrmA PF06325.13 gi|568163954|ref|YP_008947387.1| - 0.15 11.4 0.2 0.23 10.8 0.2 1.3 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) C1_1 PF00130.22 gi|568163954|ref|YP_008947387.1| - 0.32 10.9 1.0 0.65 9.9 1.0 1.4 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf_UBZ PF18439.1 gi|568163954|ref|YP_008947387.1| - 2.1 8.0 3.5 6.5 6.4 0.3 2.4 1 1 1 2 2 2 0 Ubiquitin-Binding Zinc Finger zf-ribbon_3 PF13248.6 gi|568163954|ref|YP_008947387.1| - 7 6.2 5.8 47 3.6 5.8 2.1 1 1 0 1 1 1 0 zinc-ribbon domain HTH_3 PF01381.22 gi|568163955|ref|YP_008947388.1| - 5.4e-10 39.2 0.1 1.3e-09 37.9 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|568163955|ref|YP_008947388.1| - 5.6e-07 29.5 0.4 1.6e-06 28.0 0.4 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|568163955|ref|YP_008947388.1| - 2.6e-05 24.5 0.0 4.2e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|568163955|ref|YP_008947388.1| - 6.7e-05 23.2 0.0 0.00017 22.0 0.0 1.7 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain Takusan PF04822.13 gi|568163955|ref|YP_008947388.1| - 0.003 17.4 0.6 0.011 15.6 0.6 2.0 1 0 0 1 1 1 1 Takusan HTH_11 PF08279.12 gi|568163955|ref|YP_008947388.1| - 0.012 15.6 0.0 0.046 13.7 0.0 2.0 1 0 0 1 1 1 0 HTH domain RTP1_C1 PF10363.9 gi|568163955|ref|YP_008947388.1| - 0.018 15.2 0.7 0.038 14.2 0.3 1.7 2 0 0 2 2 2 0 Required for nuclear transport of RNA pol II C-terminus 1 HTH_25 PF13413.6 gi|568163955|ref|YP_008947388.1| - 0.02 14.7 0.1 0.038 13.8 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain UvrB PF12344.8 gi|568163955|ref|YP_008947388.1| - 0.14 12.1 0.6 0.66 9.9 0.1 2.3 2 0 0 2 2 2 0 Ultra-violet resistance protein B DUF61 PF01886.16 gi|568163956|ref|YP_008947389.1| - 1e-24 87.0 0.2 1.3e-24 86.7 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF61 Fibrillarin PF01269.17 gi|568163957|ref|YP_008947390.1| - 6.3e-101 336.2 0.2 7.3e-101 336.0 0.2 1.0 1 0 0 1 1 1 1 Fibrillarin GCD14 PF08704.10 gi|568163957|ref|YP_008947390.1| - 0.025 14.2 0.0 0.084 12.5 0.0 1.8 1 1 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit PCMT PF01135.19 gi|568163957|ref|YP_008947390.1| - 0.044 13.5 0.0 0.082 12.7 0.0 1.4 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) DUF1961 PF09224.11 gi|568163957|ref|YP_008947390.1| - 0.11 11.9 0.1 0.17 11.2 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1961) Ntox33 PF15533.6 gi|568163957|ref|YP_008947390.1| - 0.11 13.0 0.1 1.2 9.7 0.0 2.3 1 1 1 2 2 2 0 Bacterial toxin 33 Nop PF01798.18 gi|568163958|ref|YP_008947391.1| - 3e-75 252.6 0.0 7.5e-75 251.3 0.0 1.6 2 0 0 2 2 2 1 snoRNA binding domain, fibrillarin Mt_ATP-synt_B PF05405.14 gi|568163958|ref|YP_008947391.1| - 0.09 12.4 1.2 0.17 11.5 0.3 1.8 2 0 0 2 2 2 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) Peptidase_S49_N PF08496.10 gi|568163958|ref|YP_008947391.1| - 0.54 10.3 6.0 0.91 9.6 6.0 1.4 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Ribosomal_S30 PF04758.14 gi|568163959|ref|YP_008947392.1| - 2.8e-14 53.0 4.6 3.4e-14 52.8 4.6 1.1 1 0 0 1 1 1 1 Ribosomal protein S30 Sas10 PF09368.10 gi|568163959|ref|YP_008947392.1| - 0.058 13.9 6.2 0.096 13.2 5.6 1.6 1 1 1 2 2 2 0 Sas10 C-terminal domain Asparaginase PF00710.20 gi|568163960|ref|YP_008947393.1| - 1.3e-59 201.0 0.0 1.8e-59 200.5 0.0 1.2 1 0 0 1 1 1 1 Asparaginase, N-terminal Asparaginase_C PF17763.1 gi|568163960|ref|YP_008947393.1| - 9.3e-34 116.1 0.0 4.2e-32 110.7 0.0 2.3 2 0 0 2 2 2 1 Glutaminase/Asparaginase C-terminal domain GatD_N PF18195.1 gi|568163960|ref|YP_008947393.1| - 5.8e-20 70.4 7.0 1.2e-19 69.4 7.0 1.5 1 0 0 1 1 1 1 GatD N-terminal domain DUF2187 PF09953.9 gi|568163960|ref|YP_008947393.1| - 0.029 14.4 0.2 0.078 13.0 0.2 1.7 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2187) RVT_thumb PF06817.14 gi|568163960|ref|YP_008947393.1| - 0.13 12.1 0.0 1.6 8.6 0.0 2.5 2 1 0 2 2 2 0 Reverse transcriptase thumb domain GatB_N PF02934.15 gi|568163961|ref|YP_008947394.1| - 1.1e-71 241.4 0.1 1.4e-71 241.1 0.1 1.1 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.18 gi|568163961|ref|YP_008947394.1| - 2.8e-21 75.9 4.5 2.8e-21 75.9 4.5 2.4 2 0 0 2 2 2 1 GatB domain GAD PF02938.14 gi|568163961|ref|YP_008947394.1| - 2.7e-12 46.8 1.0 2.2e-11 43.9 0.1 2.7 2 0 0 2 2 2 1 GAD domain YqeY PF09424.10 gi|568163961|ref|YP_008947394.1| - 0.0036 17.4 0.6 0.0083 16.2 0.6 1.7 1 0 0 1 1 1 1 Yqey-like protein GAT PF03127.14 gi|568163961|ref|YP_008947394.1| - 0.42 10.9 2.6 0.75 10.1 0.6 2.4 2 0 0 2 2 2 0 GAT domain DUF483 PF04467.12 gi|568163962|ref|YP_008947396.1| - 0.00042 20.3 0.2 0.0006 19.8 0.1 1.4 1 1 1 2 2 2 1 Protein of unknown function (DUF483) UPF0175 PF03683.13 gi|568163962|ref|YP_008947396.1| - 0.007 16.1 0.0 0.021 14.5 0.0 1.7 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0175) HTH_3 PF01381.22 gi|568163962|ref|YP_008947396.1| - 0.016 15.2 0.5 0.026 14.6 0.5 1.3 1 0 0 1 1 1 0 Helix-turn-helix YukD PF08817.10 gi|568163962|ref|YP_008947396.1| - 0.033 14.9 0.0 0.14 12.9 0.0 1.8 2 0 0 2 2 2 0 WXG100 protein secretion system (Wss), protein YukD Cro PF09048.10 gi|568163962|ref|YP_008947396.1| - 0.035 14.1 0.0 0.088 12.9 0.0 1.7 1 1 0 1 1 1 0 Cro HTH_23 PF13384.6 gi|568163962|ref|YP_008947396.1| - 0.08 12.8 0.1 0.13 12.1 0.1 1.3 1 0 0 1 1 1 0 Homeodomain-like domain Ribonuc_red_lgC PF02867.15 gi|568163963|ref|YP_008947397.1| - 2.7e-183 610.3 0.0 3.9e-183 609.8 0.0 1.2 1 0 0 1 1 1 1 Ribonucleotide reductase, barrel domain Ribonuc_red_lgN PF00317.21 gi|568163963|ref|YP_008947397.1| - 6.8e-28 96.5 0.1 1.6e-27 95.3 0.1 1.7 1 0 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain ATP-cone PF03477.16 gi|568163963|ref|YP_008947397.1| - 4.5e-06 27.1 0.1 1.4e-05 25.6 0.1 1.9 1 0 0 1 1 1 1 ATP cone domain PGK PF00162.19 gi|568163964|ref|YP_008947399.1| - 1.5e-102 343.4 0.2 1.7e-102 343.2 0.2 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase Gp_dh_C PF02800.20 gi|568163965|ref|YP_008947400.1| - 6.5e-17 61.6 0.2 9.8e-17 61.0 0.2 1.3 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DapB_N PF01113.20 gi|568163965|ref|YP_008947400.1| - 1.9e-12 47.4 0.2 4.4e-12 46.2 0.2 1.6 1 1 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Gp_dh_N PF00044.24 gi|568163965|ref|YP_008947400.1| - 3.9e-07 30.4 0.7 1.7e-05 25.0 0.1 2.9 3 0 0 3 3 3 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|568163965|ref|YP_008947400.1| - 0.0012 18.2 0.1 0.04 13.3 0.1 2.5 1 1 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Semialdhyde_dh PF01118.24 gi|568163965|ref|YP_008947400.1| - 0.0089 16.5 0.0 0.024 15.1 0.0 1.7 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.22 gi|568163965|ref|YP_008947400.1| - 0.012 16.4 0.0 0.031 15.1 0.0 1.7 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold IlvN PF07991.12 gi|568163965|ref|YP_008947400.1| - 0.013 15.1 0.3 0.19 11.3 0.0 2.5 2 1 1 3 3 3 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain PglD_N PF17836.1 gi|568163965|ref|YP_008947400.1| - 0.035 14.7 0.5 0.16 12.6 0.1 2.3 2 0 0 2 2 2 0 PglD N-terminal domain Sacchrp_dh_NADP PF03435.18 gi|568163965|ref|YP_008947400.1| - 0.093 13.0 0.0 0.22 11.8 0.0 1.6 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain NAD_binding_3 PF03447.16 gi|568163965|ref|YP_008947400.1| - 0.16 12.6 0.0 0.65 10.7 0.0 2.0 1 1 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain Usp PF00582.26 gi|568163966|ref|YP_008947401.1| - 3.5e-21 76.2 0.3 1.9e-18 67.3 0.3 2.1 1 1 0 1 1 1 1 Universal stress protein family ETF PF01012.21 gi|568163966|ref|YP_008947401.1| - 0.0035 17.3 0.0 0.0045 16.9 0.0 1.2 1 0 0 1 1 1 1 Electron transfer flavoprotein domain DUF2866 PF11065.8 gi|568163966|ref|YP_008947401.1| - 0.054 13.5 0.1 0.27 11.3 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2866) SHMT PF00464.19 gi|568163967|ref|YP_008947402.1| - 1.1e-64 218.6 0.1 1.4e-64 218.2 0.1 1.1 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Aminotran_1_2 PF00155.21 gi|568163967|ref|YP_008947402.1| - 5.7e-09 35.6 0.0 2.2e-08 33.7 0.0 1.9 1 1 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 gi|568163967|ref|YP_008947402.1| - 1.5e-08 34.3 0.0 2.2e-08 33.8 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 gi|568163967|ref|YP_008947402.1| - 0.001 18.1 0.0 0.0018 17.3 0.0 1.4 1 0 0 1 1 1 1 Aminotransferase class-V SelA PF03841.13 gi|568163967|ref|YP_008947402.1| - 0.0017 17.4 0.4 0.0036 16.4 0.0 1.9 3 0 0 3 3 3 1 L-seryl-tRNA selenium transferase Cys_Met_Meta_PP PF01053.20 gi|568163967|ref|YP_008947402.1| - 0.011 14.3 0.0 0.015 13.8 0.0 1.3 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 gi|568163967|ref|YP_008947402.1| - 0.019 14.3 0.0 0.046 13.0 0.0 1.6 2 1 0 2 2 2 0 DegT/DnrJ/EryC1/StrS aminotransferase family XTBD PF11952.8 gi|568163967|ref|YP_008947402.1| - 0.045 13.5 1.1 1.7 8.5 0.0 2.9 3 0 0 3 3 3 0 XRN-Two Binding Domain, XTBD CheD PF03975.13 gi|568163967|ref|YP_008947402.1| - 0.11 12.6 0.3 0.54 10.4 0.0 2.2 2 1 0 2 2 2 0 CheD chemotactic sensory transduction MRPL52 PF18699.1 gi|568163967|ref|YP_008947402.1| - 0.31 11.2 3.4 3.4 7.9 0.6 2.8 3 0 0 3 3 3 0 Mitoribosomal protein mL52 DUF919 PF06034.11 gi|568163967|ref|YP_008947402.1| - 1.9 8.4 6.4 5 7.0 0.3 3.2 3 0 0 3 3 3 0 Nucleopolyhedrovirus protein of unknown function (DUF919) HMG-CoA_red PF00368.18 gi|568163968|ref|YP_008947403.1| - 3.1e-126 421.3 0.8 3.5e-126 421.1 0.8 1.0 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A reductase SAC3 PF12209.8 gi|568163968|ref|YP_008947403.1| - 0.072 13.3 0.1 0.21 11.8 0.1 1.8 1 0 0 1 1 1 0 Leucine permease transcriptional regulator helical domain OB_aCoA_assoc PF01796.17 gi|568163969|ref|YP_008947404.1| - 6.4e-17 61.3 0.1 9.4e-17 60.8 0.1 1.2 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated DUF35_N PF12172.8 gi|568163969|ref|YP_008947404.1| - 3.4e-05 23.6 0.0 5.1e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) TackOD1 PF18551.1 gi|568163969|ref|YP_008947404.1| - 0.01 15.5 0.2 0.014 15.0 0.2 1.2 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 DUF2039 PF10217.9 gi|568163969|ref|YP_008947404.1| - 0.018 15.4 0.3 0.028 14.7 0.3 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2039) Zn-ribbon_8 PF09723.10 gi|568163969|ref|YP_008947404.1| - 0.039 14.1 1.4 0.12 12.6 1.4 1.8 1 1 0 1 1 1 0 Zinc ribbon domain Desulfoferrod_N PF06397.12 gi|568163969|ref|YP_008947404.1| - 0.04 13.5 3.8 2.5 7.8 0.1 2.4 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain zf-RRN7 PF11781.8 gi|568163969|ref|YP_008947404.1| - 0.099 12.3 1.2 0.92 9.2 0.1 2.5 1 1 1 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 RecR PF02132.15 gi|568163969|ref|YP_008947404.1| - 0.14 11.8 2.4 0.48 10.0 2.5 1.8 1 1 1 2 2 2 0 RecR protein zinc_ribbon_2 PF13240.6 gi|568163969|ref|YP_008947404.1| - 2.2 8.1 6.1 5 7.0 6.1 1.6 1 1 0 1 1 1 0 zinc-ribbon domain Thiolase_N PF00108.23 gi|568163970|ref|YP_008947405.1| - 1.1e-06 28.2 0.0 1.7e-06 27.6 0.0 1.3 1 0 0 1 1 1 1 Thiolase, N-terminal domain ACP_syn_III PF08545.10 gi|568163970|ref|YP_008947405.1| - 6.1e-05 22.8 0.0 0.0032 17.3 0.0 2.4 2 0 0 2 2 2 2 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ACP_syn_III_C PF08541.10 gi|568163971|ref|YP_008947406.1| - 1.8e-11 44.0 0.0 1.7e-10 40.9 0.0 2.5 4 0 0 4 4 4 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HMG_CoA_synt_N PF01154.17 gi|568163971|ref|YP_008947406.1| - 1.1e-05 25.3 0.1 1.6e-05 24.8 0.1 1.2 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase N terminal ACP_syn_III PF08545.10 gi|568163971|ref|YP_008947406.1| - 0.00017 21.4 0.7 0.00036 20.3 0.2 1.9 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HMG_CoA_synt_C PF08540.10 gi|568163971|ref|YP_008947406.1| - 0.00031 20.5 0.1 0.022 14.4 0.0 2.1 1 1 1 2 2 2 2 Hydroxymethylglutaryl-coenzyme A synthase C terminal Thiolase_N PF00108.23 gi|568163971|ref|YP_008947406.1| - 0.11 11.8 0.4 0.16 11.3 0.4 1.1 1 0 0 1 1 1 0 Thiolase, N-terminal domain AdoMet_dc PF02675.15 gi|568163972|ref|YP_008947407.1| - 4.4e-31 107.3 0.0 4.9e-31 107.1 0.0 1.0 1 0 0 1 1 1 1 S-adenosylmethionine decarboxylase PapC_N PF13954.6 gi|568164872|ref|YP_008947408.1| - 0.0021 18.0 0.1 0.004 17.2 0.1 1.4 1 0 0 1 1 1 1 PapC N-terminal domain fn3_3 PF14686.6 gi|568164872|ref|YP_008947408.1| - 0.0037 17.0 0.0 0.021 14.6 0.0 2.3 1 0 0 1 1 1 1 Polysaccharide lyase family 4, domain II hGDE_N PF14699.6 gi|568164872|ref|YP_008947408.1| - 0.04 14.1 3.5 0.69 10.1 0.4 2.7 2 1 0 2 2 2 0 N-terminal domain from the human glycogen debranching enzyme DUF4397 PF14344.6 gi|568164872|ref|YP_008947408.1| - 0.31 11.8 4.5 0.1 13.4 0.9 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4397) CARDB PF07705.11 gi|568164872|ref|YP_008947408.1| - 0.35 11.1 6.9 0.19 12.0 0.4 3.0 2 1 1 3 3 3 0 CARDB GBS_Bsp-like PF08481.10 gi|568164872|ref|YP_008947408.1| - 7.2 6.8 9.4 19 5.5 1.1 3.3 2 2 1 3 3 3 0 GBS Bsp-like repeat AAA_11 PF13086.6 gi|568164873|ref|YP_008947409.1| - 0.028 14.2 3.5 0.033 14.0 3.5 1.2 1 0 0 1 1 1 0 AAA domain HhH-GPD PF00730.25 gi|568163973|ref|YP_008947410.1| - 0.00063 20.2 0.0 0.0012 19.2 0.0 1.5 1 1 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein 2-Hacid_dh_C PF02826.19 gi|568163974|ref|YP_008947411.1| - 1.4e-53 180.9 0.3 2.6e-53 180.0 0.1 1.5 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|568163974|ref|YP_008947411.1| - 1.1e-33 115.8 0.7 1.2e-33 115.6 0.7 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AdoHcyase_NAD PF00670.21 gi|568163974|ref|YP_008947411.1| - 2e-07 31.2 0.8 2e-07 31.2 0.8 1.8 2 0 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NAD_binding_2 PF03446.15 gi|568163974|ref|YP_008947411.1| - 4.8e-06 26.8 0.6 1.4e-05 25.4 0.2 1.9 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase AlaDh_PNT_C PF01262.21 gi|568163974|ref|YP_008947411.1| - 0.00035 19.9 2.3 0.0011 18.4 2.3 1.8 1 1 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain IlvN PF07991.12 gi|568163974|ref|YP_008947411.1| - 0.0025 17.4 0.3 0.0053 16.3 0.1 1.7 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain 3HCDH_N PF02737.18 gi|568163974|ref|YP_008947411.1| - 0.0037 17.2 0.6 0.0084 16.0 0.6 1.8 1 1 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PrpR_N PF06506.11 gi|568163974|ref|YP_008947411.1| - 0.024 14.2 1.0 0.65 9.5 0.0 2.9 2 1 1 3 3 3 0 Propionate catabolism activator TSP_C PF05735.12 gi|568163974|ref|YP_008947411.1| - 0.055 13.4 0.4 6.1 6.7 0.0 2.2 2 0 0 2 2 2 0 Thrombospondin C-terminal region PTS_IIB PF02302.17 gi|568163974|ref|YP_008947411.1| - 0.074 13.8 7.4 0.37 11.5 0.8 3.5 3 1 0 3 3 3 0 PTS system, Lactose/Cellobiose specific IIB subunit F420_oxidored PF03807.17 gi|568163974|ref|YP_008947411.1| - 0.22 12.1 2.2 0.42 11.2 0.4 2.5 2 2 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent UDPG_MGDP_dh_N PF03721.14 gi|568163974|ref|YP_008947411.1| - 0.22 11.0 3.3 0.28 10.7 0.6 2.5 2 2 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Aminotran_5 PF00266.19 gi|568163975|ref|YP_008947412.1| - 3.3e-27 95.4 0.0 4e-27 95.1 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 gi|568163975|ref|YP_008947412.1| - 9.1e-08 31.7 0.0 1.4e-07 31.1 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 gi|568163975|ref|YP_008947412.1| - 1.3e-05 23.9 0.0 2e-05 23.3 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 gi|568163975|ref|YP_008947412.1| - 0.00056 19.3 0.0 0.00077 18.8 0.0 1.3 1 1 0 1 1 1 1 Beta-eliminating lyase DUF684 PF05075.14 gi|568163975|ref|YP_008947412.1| - 0.017 14.1 0.1 0.04 12.9 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF684) MCPVI PF02993.14 gi|568163975|ref|YP_008947412.1| - 0.028 14.2 0.0 0.85 9.4 0.0 2.1 1 1 1 2 2 2 0 Minor capsid protein VI Fer2_BFD PF04324.15 gi|568163975|ref|YP_008947412.1| - 0.038 14.3 0.1 21 5.6 0.1 3.1 4 0 0 4 4 4 0 BFD-like [2Fe-2S] binding domain DUF521 PF04412.13 gi|568163975|ref|YP_008947412.1| - 0.18 10.5 0.0 0.26 10.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF521) RNA_pol_Rpb6 PF01192.22 gi|568163976|ref|YP_008947413.1| - 1.2e-14 53.9 0.1 1.7e-14 53.5 0.1 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb6 Pox_RNA_Pol_19 PF05320.12 gi|568163976|ref|YP_008947413.1| - 0.00071 19.6 0.5 0.00071 19.6 0.5 1.0 1 0 0 1 1 1 1 Poxvirus DNA-directed RNA polymerase 19 kDa subunit DDE_Tnp_1_4 PF13701.6 gi|568163976|ref|YP_008947413.1| - 0.0099 14.2 0.0 0.011 14.1 0.0 1.0 1 0 0 1 1 1 1 Transposase DDE domain group 1 Topoisom_bac PF01131.20 gi|568163977|ref|YP_008947414.1| - 2.7e-106 356.0 0.1 3.8e-106 355.6 0.1 1.2 1 0 0 1 1 1 1 DNA topoisomerase Toprim PF01751.22 gi|568163977|ref|YP_008947414.1| - 1.7e-17 63.5 0.1 1.1e-16 60.9 0.0 2.5 2 0 0 2 2 2 1 Toprim domain AAA PF00004.29 gi|568163978|ref|YP_008947415.1| - 2.3e-41 141.3 0.1 1.7e-40 138.5 0.0 2.1 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) MIT PF04212.18 gi|568163978|ref|YP_008947415.1| - 1.8e-10 40.7 5.6 5e-10 39.3 5.6 1.7 1 0 0 1 1 1 1 MIT (microtubule interacting and transport) domain AAA_lid_3 PF17862.1 gi|568163978|ref|YP_008947415.1| - 2.3e-10 40.1 0.0 6.6e-10 38.6 0.0 1.8 1 0 0 1 1 1 1 AAA+ lid domain RuvB_N PF05496.12 gi|568163978|ref|YP_008947415.1| - 3.6e-07 30.1 0.0 4.6e-06 26.5 0.0 2.3 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 gi|568163978|ref|YP_008947415.1| - 4e-07 30.3 0.0 9.3e-07 29.1 0.0 1.6 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_16 PF13191.6 gi|568163978|ref|YP_008947415.1| - 5.9e-07 30.0 0.0 0.00085 19.7 0.0 2.5 1 1 1 2 2 2 2 AAA ATPase domain Vps4_C PF09336.10 gi|568163978|ref|YP_008947415.1| - 6e-07 29.4 1.1 2.6e-06 27.3 0.2 2.4 2 1 0 2 2 2 1 Vps4 C terminal oligomerisation domain AAA_14 PF13173.6 gi|568163978|ref|YP_008947415.1| - 9.7e-07 28.9 0.0 5.9e-06 26.3 0.0 2.2 1 1 2 3 3 2 1 AAA domain AAA_22 PF13401.6 gi|568163978|ref|YP_008947415.1| - 5.3e-06 26.8 0.0 0.0007 19.9 0.0 3.0 2 1 1 3 3 2 1 AAA domain AAA_5 PF07728.14 gi|568163978|ref|YP_008947415.1| - 8.5e-05 22.6 0.2 0.0027 17.7 0.1 3.0 2 1 0 2 2 1 1 AAA domain (dynein-related subfamily) AAA_24 PF13479.6 gi|568163978|ref|YP_008947415.1| - 0.00017 21.4 0.0 0.0011 18.8 0.0 2.2 1 1 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 gi|568163978|ref|YP_008947415.1| - 0.00033 20.7 7.7 0.23 11.3 0.1 3.8 3 2 1 4 4 4 2 ATPase domain predominantly from Archaea TIP49 PF06068.13 gi|568163978|ref|YP_008947415.1| - 0.00076 18.8 0.0 0.0012 18.1 0.0 1.4 1 0 0 1 1 1 1 TIP49 P-loop domain AAA_25 PF13481.6 gi|568163978|ref|YP_008947415.1| - 0.00076 19.1 0.0 0.076 12.6 0.0 2.4 2 0 0 2 2 2 1 AAA domain Viral_helicase1 PF01443.18 gi|568163978|ref|YP_008947415.1| - 0.00089 19.1 0.0 0.0028 17.4 0.0 1.8 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase RNA_helicase PF00910.22 gi|568163978|ref|YP_008947415.1| - 0.0021 18.4 0.1 0.014 15.8 0.0 2.6 2 2 0 2 2 1 1 RNA helicase AAA_18 PF13238.6 gi|568163978|ref|YP_008947415.1| - 0.0033 18.0 0.1 0.022 15.3 0.0 2.5 1 1 1 2 2 2 1 AAA domain TPR_11 PF13414.6 gi|568163978|ref|YP_008947415.1| - 0.0039 16.8 0.2 0.01 15.5 0.2 1.7 1 0 0 1 1 1 1 TPR repeat ResIII PF04851.15 gi|568163978|ref|YP_008947415.1| - 0.0056 16.7 0.0 0.057 13.4 0.0 2.3 1 1 0 2 2 2 1 Type III restriction enzyme, res subunit Mg_chelatase PF01078.21 gi|568163978|ref|YP_008947415.1| - 0.0066 15.9 0.0 0.017 14.5 0.0 1.6 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 gi|568163978|ref|YP_008947415.1| - 0.0072 15.9 0.0 0.037 13.5 0.0 2.1 2 0 0 2 2 2 1 P-loop containing dynein motor region Sigma54_activat PF00158.26 gi|568163978|ref|YP_008947415.1| - 0.0076 16.0 0.0 0.12 12.1 0.0 2.4 1 1 0 1 1 1 1 Sigma-54 interaction domain TniB PF05621.11 gi|568163978|ref|YP_008947415.1| - 0.0088 15.5 0.1 3.1 7.2 0.0 3.4 3 1 1 4 4 4 1 Bacterial TniB protein Fe_hyd_SSU PF02256.17 gi|568163978|ref|YP_008947415.1| - 0.02 15.0 0.1 0.056 13.5 0.1 1.8 1 0 0 1 1 1 0 Iron hydrogenase small subunit Zeta_toxin PF06414.12 gi|568163978|ref|YP_008947415.1| - 0.025 13.9 0.0 0.092 12.0 0.0 1.9 2 0 0 2 2 1 0 Zeta toxin Parvo_NS1 PF01057.17 gi|568163978|ref|YP_008947415.1| - 0.03 13.4 0.0 0.07 12.2 0.0 1.5 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 AAA_3 PF07726.11 gi|568163978|ref|YP_008947415.1| - 0.031 14.2 0.0 0.37 10.6 0.0 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Casc1_N PF15927.5 gi|568163978|ref|YP_008947415.1| - 0.038 13.7 0.4 0.11 12.2 0.1 1.8 2 0 0 2 2 2 0 Cancer susceptibility candidate 1 N-terminus IstB_IS21 PF01695.17 gi|568163978|ref|YP_008947415.1| - 0.04 13.6 0.0 0.084 12.6 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein DUF2075 PF09848.9 gi|568163978|ref|YP_008947415.1| - 0.04 13.1 0.0 0.085 12.1 0.0 1.5 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) DUF1912 PF08930.10 gi|568163978|ref|YP_008947415.1| - 0.041 14.1 2.5 0.9 9.7 0.3 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF1912) Use1 PF09753.9 gi|568163978|ref|YP_008947415.1| - 0.042 13.6 1.6 0.6 9.8 0.1 2.7 2 1 1 3 3 3 0 Membrane fusion protein Use1 NACHT PF05729.12 gi|568163978|ref|YP_008947415.1| - 0.048 13.6 0.0 0.095 12.6 0.0 1.5 1 0 0 1 1 1 0 NACHT domain SKI PF01202.22 gi|568163978|ref|YP_008947415.1| - 0.057 13.5 0.1 0.17 12.0 0.0 1.8 2 0 0 2 2 1 0 Shikimate kinase Bac_DnaA PF00308.18 gi|568163978|ref|YP_008947415.1| - 0.058 13.2 0.7 0.098 12.5 0.0 1.8 2 0 0 2 2 1 0 Bacterial dnaA protein NB-ARC PF00931.22 gi|568163978|ref|YP_008947415.1| - 0.058 12.6 0.0 0.12 11.5 0.0 1.5 1 0 0 1 1 1 0 NB-ARC domain AAA_17 PF13207.6 gi|568163978|ref|YP_008947415.1| - 0.067 13.6 0.0 0.34 11.4 0.0 2.2 2 1 0 2 2 1 0 AAA domain ABC_tran PF00005.27 gi|568163978|ref|YP_008947415.1| - 0.073 13.6 0.0 0.5 10.9 0.0 2.1 2 1 0 2 2 2 0 ABC transporter AAA_33 PF13671.6 gi|568163978|ref|YP_008947415.1| - 0.076 13.2 0.0 0.16 12.2 0.0 1.7 1 0 0 1 1 1 0 AAA domain ATP-synt_ab PF00006.25 gi|568163978|ref|YP_008947415.1| - 0.1 12.2 0.0 0.21 11.2 0.0 1.4 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain TPR_1 PF00515.28 gi|568163978|ref|YP_008947415.1| - 0.15 12.0 0.5 0.47 10.4 0.2 2.0 2 0 0 2 2 1 0 Tetratricopeptide repeat TPR_8 PF13181.6 gi|568163978|ref|YP_008947415.1| - 0.16 12.3 0.4 0.98 9.8 0.3 2.5 1 1 0 1 1 1 0 Tetratricopeptide repeat T3SchapCesA PF11439.8 gi|568163978|ref|YP_008947415.1| - 0.24 11.6 2.8 18 5.5 0.1 2.6 2 1 0 2 2 2 0 Type III secretion system filament chaperone CesA Gp-FAR-1 PF05823.12 gi|568163978|ref|YP_008947415.1| - 0.26 11.6 6.4 0.53 10.6 0.4 3.5 4 0 0 4 4 4 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) Snf7 PF03357.21 gi|568163979|ref|YP_008947416.1| - 2.1e-05 24.2 4.8 3.7e-05 23.4 4.6 1.6 1 1 0 1 1 1 1 Snf7 DUF3231 PF11553.8 gi|568163979|ref|YP_008947416.1| - 0.00031 20.4 0.1 0.00058 19.5 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF3231) MarR PF01047.22 gi|568163979|ref|YP_008947416.1| - 0.00061 19.7 0.0 0.0015 18.5 0.0 1.7 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|568163979|ref|YP_008947416.1| - 0.00091 19.1 0.0 0.0023 17.8 0.0 1.7 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|568163979|ref|YP_008947416.1| - 0.0011 19.4 0.2 0.41 11.2 0.0 2.5 2 0 0 2 2 2 1 Winged helix DNA-binding domain Fe_dep_repress PF01325.19 gi|568163979|ref|YP_008947416.1| - 0.0014 18.7 0.0 0.0044 17.2 0.0 1.9 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_36 PF13730.6 gi|568163979|ref|YP_008947416.1| - 0.0017 18.3 0.0 0.0037 17.2 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|568163979|ref|YP_008947416.1| - 0.0021 17.9 0.1 0.017 15.0 0.0 2.3 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB RPA_C PF08784.11 gi|568163979|ref|YP_008947416.1| - 0.0037 17.9 0.0 0.0078 16.9 0.0 1.6 1 1 0 1 1 1 1 Replication protein A C terminal HTH_DeoR PF08220.12 gi|568163979|ref|YP_008947416.1| - 0.013 15.2 0.2 0.04 13.7 0.0 1.9 2 0 0 2 2 1 0 DeoR-like helix-turn-helix domain DDRGK PF09756.9 gi|568163979|ref|YP_008947416.1| - 0.019 14.5 1.3 0.019 14.5 1.3 2.2 2 1 0 2 2 2 0 DDRGK domain DUF2250 PF10007.9 gi|568163979|ref|YP_008947416.1| - 0.022 14.9 0.9 0.069 13.3 0.0 2.3 3 0 0 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_24 PF13412.6 gi|568163979|ref|YP_008947416.1| - 0.023 14.2 0.0 0.13 11.9 0.0 2.3 3 0 0 3 3 2 0 Winged helix-turn-helix DNA-binding Rrf2 PF02082.20 gi|568163979|ref|YP_008947416.1| - 0.025 14.9 0.0 0.17 12.2 0.0 2.4 2 0 0 2 2 2 0 Transcriptional regulator HTH_11 PF08279.12 gi|568163979|ref|YP_008947416.1| - 0.031 14.2 0.3 0.13 12.3 0.0 2.2 2 0 0 2 2 2 0 HTH domain Phage_GP20 PF06810.11 gi|568163979|ref|YP_008947416.1| - 0.04 13.7 0.2 0.04 13.7 0.2 2.3 3 0 0 3 3 3 0 Phage minor structural protein GP20 FeoC PF09012.10 gi|568163979|ref|YP_008947416.1| - 0.083 13.0 0.0 0.35 11.0 0.0 2.0 2 0 0 2 2 2 0 FeoC like transcriptional regulator HTH_IclR PF09339.10 gi|568163979|ref|YP_008947416.1| - 0.11 12.4 0.0 0.28 11.0 0.0 1.8 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_47 PF16221.5 gi|568163979|ref|YP_008947416.1| - 0.14 11.7 0.1 0.66 9.6 0.0 2.1 2 0 0 2 2 2 0 winged helix-turn-helix Acetyltransf_11 PF13720.6 gi|568163979|ref|YP_008947416.1| - 0.26 11.8 2.7 0.76 10.3 0.0 2.7 3 0 0 3 3 3 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DUF4795 PF16043.5 gi|568163979|ref|YP_008947416.1| - 0.33 10.5 5.0 0.096 12.3 0.9 2.0 1 1 0 2 2 2 0 Domain of unknown function (DUF4795) CdvA PF18822.1 gi|568163980|ref|YP_008947417.1| - 4.2e-39 133.2 9.4 5.7e-39 132.7 9.4 1.2 1 0 0 1 1 1 1 CdvA-like coiled-coil domain Syntaxin-6_N PF09177.11 gi|568163980|ref|YP_008947417.1| - 0.054 14.1 2.6 0.17 12.4 1.2 2.2 1 1 1 2 2 2 0 Syntaxin 6, N-terminal NPV_P10 PF05531.12 gi|568163980|ref|YP_008947417.1| - 0.12 12.8 1.1 10 6.6 0.1 2.6 2 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein YojJ PF10372.9 gi|568163980|ref|YP_008947417.1| - 0.16 12.1 0.9 11 6.2 0.1 3.0 3 1 1 4 4 4 0 Bacterial membrane-spanning protein N-terminus PRC PF05239.16 gi|568163980|ref|YP_008947417.1| - 0.34 11.0 4.1 0.62 10.2 4.1 1.4 1 0 0 1 1 1 0 PRC-barrel domain BLOC1_2 PF10046.9 gi|568163980|ref|YP_008947417.1| - 0.75 10.1 5.0 18 5.7 0.1 2.5 2 1 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF883 PF05957.13 gi|568163980|ref|YP_008947417.1| - 1.1 9.9 3.4 0.7 10.5 1.6 1.6 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF883) ZapB PF06005.12 gi|568163980|ref|YP_008947417.1| - 9.8 6.7 8.9 9.3 6.8 3.1 2.6 2 1 0 2 2 2 0 Cell division protein ZapB Oxidored_q5_N PF01059.17 gi|568163981|ref|YP_008947418.1| - 0.00071 19.6 2.5 0.00081 19.5 2.5 1.2 1 0 0 1 1 1 1 NADH-ubiquinone oxidoreductase chain 4, amino terminus Phlebovirus_G2 PF07245.11 gi|568163981|ref|YP_008947418.1| - 0.013 14.1 1.2 0.013 14.1 1.2 1.4 1 1 1 2 2 2 0 Phlebovirus glycoprotein G2 Phlebovirus_G1 PF07243.11 gi|568163981|ref|YP_008947418.1| - 0.092 11.1 2.3 0.1 10.9 2.3 1.1 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 Fig1 PF12351.8 gi|568163981|ref|YP_008947418.1| - 0.22 11.4 5.9 0.25 11.3 5.9 1.1 1 0 0 1 1 1 0 Ca2+ regulator and membrane fusion protein Fig1 Tetraspanin PF00335.20 gi|568163981|ref|YP_008947418.1| - 8.9 6.0 7.5 10 5.7 7.5 1.1 1 0 0 1 1 1 0 Tetraspanin family Enolase_C PF00113.22 gi|568163982|ref|YP_008947419.1| - 1.1e-93 313.7 0.1 1.5e-93 313.3 0.1 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 gi|568163982|ref|YP_008947419.1| - 2.5e-35 121.5 0.1 4.4e-35 120.7 0.1 1.4 1 0 0 1 1 1 1 Enolase, N-terminal domain MR_MLE_C PF13378.6 gi|568163982|ref|YP_008947419.1| - 8.7e-07 28.7 0.0 1.4e-06 28.1 0.0 1.3 1 0 0 1 1 1 1 Enolase C-terminal domain-like DUF2614 PF11023.8 gi|568163983|ref|YP_008947420.1| - 7.6 6.7 8.6 10 6.3 8.0 1.6 1 1 0 1 1 1 0 Zinc-ribbon containing domain Zn-ribbon_8 PF09723.10 gi|568163984|ref|YP_008947421.1| - 6.6e-05 22.9 0.9 0.4 10.8 0.3 2.3 2 0 0 2 2 2 2 Zinc ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|568163984|ref|YP_008947421.1| - 0.0019 18.2 0.3 0.0038 17.2 0.3 1.5 1 1 0 1 1 1 1 Transposase zinc-ribbon domain DZR PF12773.7 gi|568163984|ref|YP_008947421.1| - 0.004 17.1 0.1 0.0086 16.1 0.1 1.5 1 1 0 1 1 1 1 Double zinc ribbon CpXC PF14353.6 gi|568163984|ref|YP_008947421.1| - 0.0059 16.6 0.1 0.0088 16.1 0.1 1.2 1 0 0 1 1 1 1 CpXC protein DUF4379 PF14311.6 gi|568163984|ref|YP_008947421.1| - 0.0079 16.5 2.1 0.032 14.6 0.2 2.1 2 0 0 2 2 2 1 Probable Zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|568163984|ref|YP_008947421.1| - 0.0093 15.9 0.5 4 7.4 0.1 2.4 2 0 0 2 2 2 2 Putative transposase DNA-binding domain zf-ribbon_3 PF13248.6 gi|568163984|ref|YP_008947421.1| - 0.031 13.7 5.2 0.16 11.4 0.2 2.3 2 0 0 2 2 2 0 zinc-ribbon domain TFIIS_C PF01096.18 gi|568163984|ref|YP_008947421.1| - 0.041 13.7 4.8 0.19 11.6 0.5 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) zf-ISL3 PF14690.6 gi|568163984|ref|YP_008947421.1| - 0.047 14.4 0.8 1.9 9.2 0.1 2.4 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zinc_ribbon_2 PF13240.6 gi|568163984|ref|YP_008947421.1| - 0.054 13.2 7.5 0.31 10.8 0.9 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-NADH-PPase PF09297.11 gi|568163984|ref|YP_008947421.1| - 0.06 13.0 0.7 9.1 6.0 0.0 2.3 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain zinc_ribbon_5 PF13719.6 gi|568163984|ref|YP_008947421.1| - 0.063 13.1 1.0 0.48 10.2 0.0 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-C3H2C3 PF17122.5 gi|568163984|ref|YP_008947421.1| - 0.089 12.8 0.8 2.7 8.1 0.1 2.2 2 0 0 2 2 2 0 Zinc-finger Zn_Tnp_IS91 PF14319.6 gi|568163984|ref|YP_008947421.1| - 0.092 12.8 0.2 7.7 6.6 0.0 2.1 2 0 0 2 2 2 0 Transposase zinc-binding domain DUF1272 PF06906.11 gi|568163984|ref|YP_008947421.1| - 0.1 12.7 0.3 4.5 7.5 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1272) Nudix_N_2 PF14803.6 gi|568163984|ref|YP_008947421.1| - 0.1 12.5 1.1 9.1 6.3 0.1 2.6 2 0 0 2 2 2 0 Nudix N-terminal DNA_RNApol_7kD PF03604.13 gi|568163984|ref|YP_008947421.1| - 0.16 11.7 1.8 1.9 8.2 0.2 2.4 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit Ogr_Delta PF04606.12 gi|568163984|ref|YP_008947421.1| - 0.21 11.6 2.4 4.1 7.5 0.2 2.2 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger UPF0547 PF10571.9 gi|568163984|ref|YP_008947421.1| - 0.24 11.5 5.1 3 8.0 0.6 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-IS66 PF13005.7 gi|568163984|ref|YP_008947421.1| - 0.28 11.6 4.1 0.34 11.3 1.5 2.4 2 1 0 2 2 2 0 zinc-finger binding domain of transposase IS66 zinc_ribbon_4 PF13717.6 gi|568163984|ref|YP_008947421.1| - 0.29 11.1 6.1 1.8 8.6 0.2 2.7 3 0 0 3 3 3 0 zinc-ribbon domain Rubredoxin_2 PF18073.1 gi|568163984|ref|YP_008947421.1| - 0.64 9.8 5.1 3.6 7.4 0.6 2.3 2 0 0 2 2 2 0 Rubredoxin metal binding domain TF_Zn_Ribbon PF08271.12 gi|568163984|ref|YP_008947421.1| - 0.83 9.2 5.4 4.2 7.0 0.3 2.6 3 0 0 3 3 2 0 TFIIB zinc-binding zf-3CxxC_2 PF17180.4 gi|568163984|ref|YP_008947421.1| - 0.89 10.3 5.1 0.92 10.3 2.3 2.3 2 1 0 2 2 2 0 Zinc-binding domain Peptidase_S24 PF00717.23 gi|568163985|ref|YP_008947422.1| - 0.0007 19.5 0.3 0.001 19.0 0.3 1.3 1 0 0 1 1 1 1 Peptidase S24-like GDC-P PF02347.16 gi|568163986|ref|YP_008947423.1| - 8.6e-13 47.9 0.0 4.6e-12 45.5 0.0 1.8 2 0 0 2 2 2 1 Glycine cleavage system P-protein Aminotran_5 PF00266.19 gi|568163986|ref|YP_008947423.1| - 2.3e-07 30.1 0.0 4.5e-07 29.1 0.0 1.5 1 1 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|568163986|ref|YP_008947423.1| - 0.026 13.8 0.0 0.039 13.2 0.0 1.2 1 0 0 1 1 1 0 Beta-eliminating lyase GDC-P PF02347.16 gi|568163987|ref|YP_008947424.1| - 3.2e-111 372.2 0.0 4.1e-111 371.9 0.0 1.0 1 0 0 1 1 1 1 Glycine cleavage system P-protein GCV_T PF01571.21 gi|568163988|ref|YP_008947425.1| - 1.3e-62 211.5 0.0 1.6e-62 211.2 0.0 1.1 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain GCV_T_C PF08669.11 gi|568163988|ref|YP_008947425.1| - 6.1e-18 64.5 0.0 1.1e-17 63.7 0.0 1.3 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain CspB_prodomain PF18425.1 gi|568163988|ref|YP_008947425.1| - 0.095 12.7 0.2 0.35 10.9 0.1 1.9 2 0 0 2 2 2 0 Csp protease B prodomain GCV_H PF01597.19 gi|568163989|ref|YP_008947426.1| - 4.3e-42 142.9 0.5 4.9e-42 142.7 0.5 1.0 1 0 0 1 1 1 1 Glycine cleavage H-protein Biotin_lipoyl PF00364.22 gi|568163989|ref|YP_008947426.1| - 0.0024 17.7 0.4 0.005 16.7 0.2 1.6 2 0 0 2 2 2 1 Biotin-requiring enzyme RnfC_N PF13375.6 gi|568163989|ref|YP_008947426.1| - 0.0043 17.0 0.6 0.0097 15.8 0.2 1.8 2 0 0 2 2 2 1 RnfC Barrel sandwich hybrid domain PAC2 PF09754.9 gi|568163990|ref|YP_008947427.1| - 1.4e-36 126.6 0.0 1.6e-36 126.4 0.0 1.0 1 0 0 1 1 1 1 PAC2 family PIH1_CS PF18201.1 gi|568163991|ref|YP_008947428.1| - 0.017 15.5 0.0 0.035 14.5 0.0 1.6 1 1 1 2 2 2 0 PIH1 CS-like domain Orthopox_B11R PF07033.11 gi|568163991|ref|YP_008947428.1| - 0.075 12.8 2.3 0.15 11.9 2.3 1.5 1 0 0 1 1 1 0 Orthopoxvirus B11R protein DUF883 PF05957.13 gi|568163991|ref|YP_008947428.1| - 0.17 12.5 0.3 0.29 11.8 0.3 1.4 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF883) MazE_antitoxin PF04014.18 gi|568163992|ref|YP_008947429.1| - 1.2e-08 34.6 0.2 3.7e-08 33.1 0.2 1.9 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin RIF5_SNase_1 PF18187.1 gi|568163992|ref|YP_008947429.1| - 0.0046 16.7 0.0 0.39 10.4 0.0 2.4 2 0 0 2 2 2 2 TbRIF5 SNase domain 1 ATP13 PF12921.7 gi|568163992|ref|YP_008947429.1| - 0.26 11.2 2.9 0.19 11.6 0.9 1.8 2 0 0 2 2 2 0 Mitochondrial ATPase expression Mnd1 PF03962.15 gi|568163992|ref|YP_008947429.1| - 1.6 9.1 4.7 0.85 10.0 0.2 2.9 3 1 1 4 4 4 0 Mnd1 HTH domain ABC_tran PF00005.27 gi|568163993|ref|YP_008947430.1| - 4.6e-23 82.2 0.2 6.3e-23 81.8 0.2 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|568163993|ref|YP_008947430.1| - 1.7e-07 31.4 0.5 0.012 15.4 0.1 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|568163993|ref|YP_008947430.1| - 5e-07 29.4 0.8 1.9e-06 27.5 0.8 1.8 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|568163993|ref|YP_008947430.1| - 0.0029 17.4 0.1 0.0039 16.9 0.1 1.2 1 1 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|568163993|ref|YP_008947430.1| - 0.011 15.7 0.1 0.02 14.8 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_29 PF13555.6 gi|568163993|ref|YP_008947430.1| - 0.012 15.3 0.2 0.029 14.1 0.2 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_13 PF13166.6 gi|568163993|ref|YP_008947430.1| - 0.017 13.8 0.1 0.036 12.7 0.0 1.5 2 0 0 2 2 2 0 AAA domain AAA PF00004.29 gi|568163993|ref|YP_008947430.1| - 0.017 15.5 0.2 0.043 14.2 0.2 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.6 gi|568163993|ref|YP_008947430.1| - 0.039 14.5 0.3 0.053 14.0 0.3 1.6 1 1 0 1 1 1 0 AAA domain PduV-EutP PF10662.9 gi|568163993|ref|YP_008947430.1| - 0.064 13.0 0.0 0.12 12.1 0.0 1.4 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation AAA_25 PF13481.6 gi|568163993|ref|YP_008947430.1| - 0.071 12.7 0.0 0.1 12.2 0.0 1.4 1 1 0 1 1 1 0 AAA domain AAA_27 PF13514.6 gi|568163993|ref|YP_008947430.1| - 0.11 12.0 0.0 0.21 11.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain UPF0051 PF01458.17 gi|568163994|ref|YP_008947431.1| - 4.1e-63 213.0 0.0 5.2e-63 212.6 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) DUF4295 PF14128.6 gi|568163994|ref|YP_008947431.1| - 0.068 13.0 0.0 0.25 11.2 0.0 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF4295) UPF0051 PF01458.17 gi|568163995|ref|YP_008947432.1| - 2.7e-34 118.8 0.5 3.8e-34 118.3 0.5 1.2 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) RHH_1 PF01402.21 gi|568163996|ref|YP_008947433.1| - 2.3e-10 40.0 0.7 2.5e-10 39.9 0.7 1.0 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family RHH_3 PF12651.7 gi|568163996|ref|YP_008947433.1| - 3.7e-05 23.6 1.1 7e-05 22.7 1.1 1.4 1 1 0 1 1 1 1 Ribbon-helix-helix domain VapB_antitoxin PF09957.9 gi|568163996|ref|YP_008947433.1| - 0.0089 15.9 1.3 0.026 14.4 1.3 1.7 1 1 0 1 1 1 1 Bacterial antitoxin of type II TA system, VapB ADH_N PF08240.12 gi|568163997|ref|YP_008947434.1| - 5.9e-27 93.7 0.7 1e-26 92.9 0.2 1.7 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|568163997|ref|YP_008947434.1| - 2.6e-22 79.2 0.1 5.3e-22 78.2 0.1 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|568163997|ref|YP_008947434.1| - 3.7e-09 37.7 0.0 9.1e-09 36.5 0.0 1.6 1 0 0 1 1 1 1 Zinc-binding dehydrogenase YjeF_N PF03853.15 gi|568163997|ref|YP_008947434.1| - 0.0097 15.8 0.1 0.015 15.2 0.1 1.3 1 0 0 1 1 1 1 YjeF-related protein N-terminus DapB_N PF01113.20 gi|568163997|ref|YP_008947434.1| - 0.029 14.5 0.8 1 9.5 0.8 2.5 1 1 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus SIS_2 PF13580.6 gi|568163997|ref|YP_008947434.1| - 0.042 13.9 0.1 0.23 11.5 0.1 2.1 2 0 0 2 2 2 0 SIS domain tRNA-synt_1d PF00750.19 gi|568163998|ref|YP_008947435.1| - 5.6e-37 127.5 1.8 6.1e-35 120.8 1.8 2.2 1 1 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.15 gi|568163998|ref|YP_008947435.1| - 2.4e-24 85.8 0.0 7e-24 84.3 0.0 1.9 2 0 0 2 2 2 1 DALR anticodon binding domain tRNA-synt_1e PF01406.19 gi|568163998|ref|YP_008947435.1| - 0.00043 19.7 0.4 0.37 10.1 0.1 2.7 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 gi|568163998|ref|YP_008947435.1| - 0.0059 15.4 0.2 0.1 11.3 0.1 2.7 3 0 0 3 3 3 1 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 gi|568163998|ref|YP_008947435.1| - 0.0068 14.7 0.4 0.021 13.1 0.0 1.9 2 0 0 2 2 2 1 tRNA synthetases class I (I, L, M and V) Cytochrom_B562 PF07361.11 gi|568163998|ref|YP_008947435.1| - 0.089 13.5 0.5 0.33 11.6 0.1 2.1 2 0 0 2 2 2 0 Cytochrome b562 CTD_bind PF04818.13 gi|568163998|ref|YP_008947435.1| - 0.51 11.2 2.1 11 6.9 0.1 3.5 4 0 0 4 4 4 0 RNA polymerase II-binding domain. DUF4423 PF14394.6 gi|568164001|ref|YP_008947438.1| - 0.016 14.9 0.3 0.019 14.7 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) TBPIP PF07106.13 gi|568164001|ref|YP_008947438.1| - 0.018 15.0 0.1 0.033 14.1 0.1 1.5 1 0 0 1 1 1 0 TBPIP/Hop2 winged helix domain DpnI_C PF17726.1 gi|568164001|ref|YP_008947438.1| - 0.022 14.9 0.0 0.082 13.1 0.0 1.8 1 1 1 2 2 2 0 Dam-replacing HTH domain HTH_9 PF08221.11 gi|568164001|ref|YP_008947438.1| - 0.036 14.1 0.0 0.054 13.6 0.0 1.2 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain DUF763 PF05559.11 gi|568164001|ref|YP_008947438.1| - 0.1 11.7 0.2 0.11 11.7 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF763) Imm8 PF15586.6 gi|568164002|ref|YP_008947439.1| - 0.059 13.4 0.0 0.1 12.7 0.0 1.4 1 0 0 1 1 1 0 Immunity protein 8 Cpn60_TCP1 PF00118.24 gi|568164003|ref|YP_008947440.1| - 1.8e-173 577.7 17.6 2e-173 577.5 17.6 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Alba PF01918.21 gi|568164003|ref|YP_008947440.1| - 0.006 16.4 0.1 1.4 8.8 0.0 3.4 3 0 0 3 3 3 1 Alba MCR_alpha_N PF02745.15 gi|568164003|ref|YP_008947440.1| - 0.067 12.5 0.1 0.18 11.1 0.1 1.7 1 0 0 1 1 1 0 Methyl-coenzyme M reductase alpha subunit, N-terminal domain DZR PF12773.7 gi|568164874|ref|YP_008947441.1| - 0.00023 21.1 8.1 0.0013 18.7 1.1 2.5 2 1 0 2 2 2 2 Double zinc ribbon Cript PF10235.9 gi|568164874|ref|YP_008947441.1| - 0.002 18.7 8.2 0.061 13.9 0.6 3.3 3 0 0 3 3 3 2 Microtubule-associated protein CRIPT zinc_ribbon_2 PF13240.6 gi|568164874|ref|YP_008947441.1| - 0.0036 17.0 4.8 0.0036 17.0 4.8 3.2 3 0 0 3 3 3 1 zinc-ribbon domain zf-FPG_IleRS PF06827.14 gi|568164874|ref|YP_008947441.1| - 0.012 15.4 4.5 4.3 7.3 0.1 3.5 3 0 0 3 3 3 0 Zinc finger found in FPG and IleRS Zn_Tnp_IS91 PF14319.6 gi|568164874|ref|YP_008947441.1| - 0.049 13.7 3.8 0.13 12.3 0.2 2.3 2 0 0 2 2 2 0 Transposase zinc-binding domain DUF2318 PF10080.9 gi|568164874|ref|YP_008947441.1| - 0.39 10.9 7.0 0.4 10.8 1.0 2.4 2 0 0 2 2 2 0 Predicted membrane protein (DUF2318) zf-FCS PF06467.14 gi|568164874|ref|YP_008947441.1| - 0.81 9.7 5.4 32 4.6 3.3 3.2 2 1 1 3 3 3 0 MYM-type Zinc finger with FCS sequence motif zinc_ribbon_15 PF17032.5 gi|568164874|ref|YP_008947441.1| - 0.84 10.4 14.8 0.21 12.4 6.8 2.9 2 2 0 2 2 2 0 zinc-ribbon family zf-C2HC5 PF06221.13 gi|568164874|ref|YP_008947441.1| - 3.4 7.7 6.7 4.4 7.4 0.4 2.5 2 1 0 2 2 2 0 Putative zinc finger motif, C2HC5-type OrfB_Zn_ribbon PF07282.11 gi|568164874|ref|YP_008947441.1| - 8.7 6.3 9.1 2.3 8.2 0.7 2.6 2 1 1 3 3 3 0 Putative transposase DNA-binding domain HTH_45 PF14947.6 gi|568164006|ref|YP_008947444.1| - 4.2e-05 23.5 0.5 0.00022 21.1 0.1 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix Rrf2 PF02082.20 gi|568164006|ref|YP_008947444.1| - 0.00039 20.7 0.0 0.027 14.8 0.0 3.0 2 1 1 3 3 3 1 Transcriptional regulator TrmB PF01978.19 gi|568164006|ref|YP_008947444.1| - 0.0054 16.6 0.1 0.024 14.5 0.0 2.1 3 0 0 3 3 3 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|568164006|ref|YP_008947444.1| - 0.0086 16.0 0.0 0.022 14.7 0.0 1.6 1 0 0 1 1 1 1 MarR family PPO1_KFDV PF12143.8 gi|568164006|ref|YP_008947444.1| - 0.011 15.9 1.2 0.019 15.1 1.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF_B2219) HTH_5 PF01022.20 gi|568164006|ref|YP_008947444.1| - 0.011 15.5 0.0 0.026 14.4 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family MarR PF01047.22 gi|568164006|ref|YP_008947444.1| - 0.014 15.3 0.8 4.7 7.2 0.0 2.7 3 0 0 3 3 2 0 MarR family HTH_23 PF13384.6 gi|568164006|ref|YP_008947444.1| - 0.049 13.5 0.0 0.14 12.0 0.0 1.8 1 0 0 1 1 1 0 Homeodomain-like domain AbiEi_4 PF13338.6 gi|568164006|ref|YP_008947444.1| - 0.074 13.2 0.1 0.27 11.4 0.0 1.9 2 0 0 2 2 2 0 Transcriptional regulator, AbiEi antitoxin CemA PF03040.14 gi|568164006|ref|YP_008947444.1| - 0.093 12.6 0.5 0.17 11.8 0.5 1.5 1 1 0 1 1 1 0 CemA family CCM2_C PF16545.5 gi|568164006|ref|YP_008947444.1| - 0.12 12.9 0.9 11 6.7 0.0 2.5 1 1 1 2 2 2 0 Cerebral cavernous malformation protein, harmonin-homology HEPN_RiboL-PSP PF18735.1 gi|568164006|ref|YP_008947444.1| - 0.17 11.8 11.1 0.15 11.9 9.6 1.6 2 0 0 2 2 2 0 RiboL-PSP-HEPN Bromo_TP_like PF17027.5 gi|568164006|ref|YP_008947444.1| - 0.75 10.0 6.5 1.8 8.7 6.0 1.9 1 1 0 1 1 1 0 Histone-fold protein NAD_kinase PF01513.21 gi|568164007|ref|YP_008947445.1| - 3.2e-51 174.2 0.0 3.5e-51 174.1 0.0 1.0 1 0 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.24 gi|568164007|ref|YP_008947445.1| - 0.00064 19.3 0.0 0.0039 16.8 0.0 2.1 2 0 0 2 2 2 1 Diacylglycerol kinase catalytic domain Arb2 PF09757.9 gi|568164007|ref|YP_008947445.1| - 0.098 11.8 0.0 0.16 11.1 0.0 1.3 1 0 0 1 1 1 0 Arb2 domain HTH_12 PF08461.10 gi|568164008|ref|YP_008947446.1| - 0.00088 19.2 0.3 0.0018 18.2 0.3 1.5 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain Ribosomal_S19e PF01090.19 gi|568164008|ref|YP_008947446.1| - 0.041 13.6 0.0 0.079 12.7 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein S19e HTH_45 PF14947.6 gi|568164008|ref|YP_008947446.1| - 0.043 13.8 0.0 0.11 12.4 0.0 1.8 1 0 0 1 1 1 0 Winged helix-turn-helix MarR PF01047.22 gi|568164008|ref|YP_008947446.1| - 0.049 13.6 0.2 0.096 12.6 0.2 1.4 1 0 0 1 1 1 0 MarR family Fe_dep_repress PF01325.19 gi|568164008|ref|YP_008947446.1| - 0.049 13.8 0.0 0.094 12.9 0.0 1.5 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain Replic_Relax PF13814.6 gi|568164008|ref|YP_008947446.1| - 0.076 13.1 0.1 0.1 12.7 0.1 1.2 1 0 0 1 1 1 0 Replication-relaxation OTCace PF00185.24 gi|568164009|ref|YP_008947447.1| - 1.4e-55 187.7 0.1 2.3e-55 187.0 0.1 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OTCace_N PF02729.21 gi|568164009|ref|YP_008947447.1| - 1.9e-45 154.5 0.1 4.7e-45 153.2 0.0 1.6 2 0 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Nre_N PF04894.12 gi|568164010|ref|YP_008947448.1| - 3.6e-94 315.6 0.0 6e-94 314.9 0.0 1.3 1 0 0 1 1 1 1 Archaeal Nre, N-terminal Nre_C PF04895.12 gi|568164010|ref|YP_008947448.1| - 6.7e-34 116.1 0.0 1.5e-33 115.0 0.0 1.6 1 0 0 1 1 1 1 Archaeal Nre, C-terminal PHP_C PF13263.6 gi|568164011|ref|YP_008947449.1| - 8.4e-13 47.9 0.0 1.5e-12 47.1 0.0 1.4 1 0 0 1 1 1 1 PHP-associated PHP PF02811.19 gi|568164011|ref|YP_008947449.1| - 6.5e-06 26.5 0.1 5.4e-05 23.6 0.0 2.0 2 0 0 2 2 2 1 PHP domain Semialdhyde_dh PF01118.24 gi|568164012|ref|YP_008947450.1| - 9.5e-33 113.2 0.0 1.6e-32 112.5 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.18 gi|568164012|ref|YP_008947450.1| - 1.2e-26 93.9 0.0 1.8e-26 93.3 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Gp_dh_C PF02800.20 gi|568164012|ref|YP_008947450.1| - 0.02 14.5 0.1 0.043 13.4 0.1 1.7 2 0 0 2 2 2 0 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Ldh_1_N PF00056.23 gi|568164012|ref|YP_008947450.1| - 0.026 14.6 0.1 0.06 13.4 0.1 1.6 1 0 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain DapB_N PF01113.20 gi|568164012|ref|YP_008947450.1| - 0.043 14.0 0.0 0.085 13.0 0.0 1.6 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus DXP_reductoisom PF02670.16 gi|568164012|ref|YP_008947450.1| - 0.049 14.4 0.2 0.32 11.7 0.0 2.4 3 0 0 3 3 3 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase AA_kinase PF00696.28 gi|568164013|ref|YP_008947451.1| - 1.8e-38 132.5 1.4 2.4e-38 132.1 0.1 1.8 2 0 0 2 2 2 1 Amino acid kinase family ACT_7 PF13840.6 gi|568164013|ref|YP_008947451.1| - 0.00023 20.9 0.6 0.001 18.8 0.2 2.4 2 0 0 2 2 2 1 ACT domain ACT PF01842.25 gi|568164013|ref|YP_008947451.1| - 0.046 13.5 4.7 2 8.3 0.4 3.4 3 1 1 4 4 4 0 ACT domain PALP PF00291.25 gi|568164014|ref|YP_008947452.1| - 5.8e-73 245.9 0.1 6.9e-73 245.6 0.1 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Zn-ribbon_8 PF09723.10 gi|568164014|ref|YP_008947452.1| - 0.0059 16.7 0.1 0.0096 16.0 0.1 1.4 1 0 0 1 1 1 1 Zinc ribbon domain Prok-RING_1 PF14446.6 gi|568164014|ref|YP_008947452.1| - 0.02 14.8 0.5 0.033 14.1 0.5 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 zf-RING_7 PF02591.15 gi|568164014|ref|YP_008947452.1| - 0.03 14.5 0.1 0.09 13.0 0.1 1.8 1 0 0 1 1 1 0 C4-type zinc ribbon domain HypA PF01155.19 gi|568164014|ref|YP_008947452.1| - 0.036 14.1 0.1 0.055 13.5 0.1 1.3 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DNA_RNApol_7kD PF03604.13 gi|568164014|ref|YP_008947452.1| - 0.26 11.0 1.5 0.56 9.9 1.5 1.5 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit UbiD PF01977.16 gi|568164015|ref|YP_008947453.1| - 1.4e-128 429.3 0.0 1.7e-128 429.0 0.0 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Snf7 PF03357.21 gi|568164016|ref|YP_008947455.1| - 0.00025 20.7 2.6 0.00037 20.1 2.6 1.5 1 1 0 1 1 1 1 Snf7 LOH1CR12 PF10158.9 gi|568164016|ref|YP_008947455.1| - 0.02 14.9 0.3 0.039 14.0 0.3 1.5 1 0 0 1 1 1 0 Tumour suppressor protein BLOC1S3 PF15753.5 gi|568164016|ref|YP_008947455.1| - 0.12 12.5 3.2 0.8 9.8 3.2 2.2 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex 1 subunit 3 PPDK_N PF01326.19 gi|568164017|ref|YP_008947456.1| - 2.8e-114 381.8 1.7 4.5e-114 381.1 1.7 1.3 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 gi|568164017|ref|YP_008947456.1| - 3e-81 272.8 0.0 5.5e-81 271.9 0.0 1.4 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 gi|568164017|ref|YP_008947456.1| - 1.3e-29 101.7 0.2 4.5e-29 100.0 0.2 2.0 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain UPF0147 PF03685.13 gi|568164017|ref|YP_008947456.1| - 0.051 13.6 1.5 0.13 12.4 0.5 2.2 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0147) PEP-utilisers_N PF05524.13 gi|568164017|ref|YP_008947456.1| - 0.11 12.6 1.0 3.5 7.8 0.0 3.1 3 0 0 3 3 3 0 PEP-utilising enzyme, N-terminal zf-B_box PF00643.24 gi|568164018|ref|YP_008947457.1| - 0.0034 17.5 32.1 0.0048 17.0 6.4 4.0 2 1 2 4 4 4 3 B-box zinc finger FYVE PF01363.21 gi|568164018|ref|YP_008947457.1| - 0.089 12.9 31.6 0.81 9.9 4.2 3.9 1 1 1 2 2 2 0 FYVE zinc finger DZR PF12773.7 gi|568164018|ref|YP_008947457.1| - 0.47 10.5 26.0 8.4e+03 -3.1 26.0 3.8 1 1 0 1 1 1 0 Double zinc ribbon zf-AN1 PF01428.16 gi|568164018|ref|YP_008947457.1| - 0.53 10.5 27.4 0.19 11.9 3.1 3.6 2 1 2 4 4 4 0 AN1-like Zinc finger DUF4428 PF14471.6 gi|568164018|ref|YP_008947457.1| - 0.58 10.1 0.3 0.58 10.1 0.3 4.1 2 2 1 3 3 3 0 Domain of unknown function (DUF4428) Prok-RING_2 PF14445.6 gi|568164018|ref|YP_008947457.1| - 3.2 8.0 20.2 0.067 13.4 3.0 2.4 1 1 1 2 2 2 0 Prokaryotic RING finger family 2 zf-RING_5 PF14634.6 gi|568164018|ref|YP_008947457.1| - 7.3 6.7 27.4 0.87 9.6 9.6 3.2 1 1 2 3 3 3 0 zinc-RING finger domain Inos-1-P_synth PF01658.17 gi|568164019|ref|YP_008947458.1| - 1.4e-29 102.5 0.1 3.3e-29 101.3 0.0 1.6 2 0 0 2 2 2 1 Myo-inositol-1-phosphate synthase NAD_binding_5 PF07994.12 gi|568164019|ref|YP_008947458.1| - 0.011 15.1 0.1 0.075 12.4 0.0 2.3 2 1 0 2 2 2 0 Myo-inositol-1-phosphate synthase Acylphosphatase PF00708.18 gi|568164020|ref|YP_008947459.1| - 2.3e-27 95.2 0.0 2.5e-27 95.1 0.0 1.0 1 0 0 1 1 1 1 Acylphosphatase PALP PF00291.25 gi|568164021|ref|YP_008947460.1| - 7.4e-41 140.5 0.0 9.7e-41 140.1 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Trp_syntA PF00290.20 gi|568164022|ref|YP_008947461.1| - 7.8e-34 116.7 0.4 9.4e-34 116.4 0.4 1.0 1 0 0 1 1 1 1 Tryptophan synthase alpha chain His_biosynth PF00977.21 gi|568164022|ref|YP_008947461.1| - 2.5e-05 23.8 1.3 2.8e-05 23.7 0.3 1.5 2 0 0 2 2 2 1 Histidine biosynthesis protein TMP-TENI PF02581.17 gi|568164022|ref|YP_008947461.1| - 0.0028 17.0 0.1 0.007 15.7 0.0 1.6 2 0 0 2 2 2 1 Thiamine monophosphate synthase PcrB PF01884.17 gi|568164022|ref|YP_008947461.1| - 0.0045 16.5 0.8 0.0066 15.9 0.1 1.6 2 0 0 2 2 2 1 PcrB family NMO PF03060.15 gi|568164022|ref|YP_008947461.1| - 0.0078 15.6 0.1 0.028 13.8 0.1 1.8 1 1 1 2 2 2 1 Nitronate monooxygenase FMN_dh PF01070.18 gi|568164022|ref|YP_008947461.1| - 0.012 14.7 0.2 0.018 14.1 0.2 1.2 1 0 0 1 1 1 0 FMN-dependent dehydrogenase ThiG PF05690.14 gi|568164022|ref|YP_008947461.1| - 0.052 12.8 0.6 0.083 12.2 0.0 1.7 2 0 0 2 2 2 0 Thiazole biosynthesis protein ThiG Ribul_P_3_epim PF00834.19 gi|568164022|ref|YP_008947461.1| - 0.065 12.6 0.0 0.088 12.2 0.0 1.4 1 0 0 1 1 1 0 Ribulose-phosphate 3 epimerase family G3P_antiterm PF04309.12 gi|568164022|ref|YP_008947461.1| - 0.09 12.2 0.6 0.18 11.2 0.1 1.7 2 0 0 2 2 2 0 Glycerol-3-phosphate responsive antiterminator Glycos_transf_3 PF00591.21 gi|568164023|ref|YP_008947462.1| - 7.4e-74 248.5 0.0 1e-73 248.1 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.17 gi|568164023|ref|YP_008947462.1| - 3.2e-17 62.1 0.3 6.4e-17 61.2 0.3 1.6 1 0 0 1 1 1 1 Glycosyl transferase family, helical bundle domain PRAI PF00697.22 gi|568164024|ref|YP_008947463.1| - 7.2e-28 97.7 0.0 8.2e-28 97.5 0.0 1.0 1 0 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Chorismate_bind PF00425.18 gi|568164025|ref|YP_008947464.1| - 2e-92 309.4 0.0 2.4e-92 309.1 0.0 1.1 1 0 0 1 1 1 1 chorismate binding enzyme Anth_synt_I_N PF04715.13 gi|568164025|ref|YP_008947464.1| - 2.2e-23 83.0 0.0 1.1e-22 80.8 0.0 2.1 2 0 0 2 2 2 1 Anthranilate synthase component I, N terminal region GATase PF00117.28 gi|568164026|ref|YP_008947465.1| - 5.4e-46 156.8 0.0 6e-46 156.6 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|568164026|ref|YP_008947465.1| - 2.5e-12 47.0 0.0 3.6e-12 46.5 0.0 1.3 1 0 0 1 1 1 1 Peptidase C26 SNO PF01174.19 gi|568164026|ref|YP_008947465.1| - 0.078 12.8 0.0 0.13 12.1 0.0 1.4 1 0 0 1 1 1 0 SNO glutamine amidotransferase family IGPS PF00218.21 gi|568164027|ref|YP_008947466.1| - 2.3e-73 246.5 0.6 2.9e-73 246.2 0.6 1.0 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase His_biosynth PF00977.21 gi|568164027|ref|YP_008947466.1| - 0.00053 19.5 0.2 0.0078 15.7 0.0 2.1 1 1 1 2 2 2 1 Histidine biosynthesis protein FMN_dh PF01070.18 gi|568164027|ref|YP_008947466.1| - 0.0027 16.8 0.0 1.7 7.6 0.0 2.1 2 0 0 2 2 2 2 FMN-dependent dehydrogenase QRPTase_C PF01729.19 gi|568164027|ref|YP_008947466.1| - 0.065 13.0 0.1 0.52 10.1 0.0 2.0 1 1 1 2 2 2 0 Quinolinate phosphoribosyl transferase, C-terminal domain Aminotran_1_2 PF00155.21 gi|568164028|ref|YP_008947467.1| - 7e-77 259.0 0.0 8e-77 258.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|568164028|ref|YP_008947467.1| - 9.4e-10 38.3 0.0 2.3e-09 37.1 0.0 1.5 2 0 0 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 gi|568164028|ref|YP_008947467.1| - 7.6e-07 28.4 0.0 2e-06 27.0 0.0 1.6 2 0 0 2 2 2 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|568164028|ref|YP_008947467.1| - 2e-05 23.3 0.0 3.6e-05 22.5 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 gi|568164028|ref|YP_008947467.1| - 0.00059 19.2 0.0 0.001 18.4 0.0 1.4 1 0 0 1 1 1 1 Beta-eliminating lyase OKR_DC_1 PF01276.20 gi|568164028|ref|YP_008947467.1| - 0.076 11.7 0.0 0.19 10.4 0.0 1.7 1 1 1 2 2 2 0 Orn/Lys/Arg decarboxylase, major domain tRNA-synt_1 PF00133.22 gi|568164029|ref|YP_008947468.1| - 2.1e-126 422.6 0.1 3.6e-125 418.5 0.1 2.2 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|568164029|ref|YP_008947468.1| - 1e-30 106.7 2.6 1.9e-30 105.8 2.6 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|568164029|ref|YP_008947468.1| - 1.4e-21 76.7 0.1 1.9e-09 36.8 0.0 3.5 3 0 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1_2 PF13603.6 gi|568164029|ref|YP_008947468.1| - 3.8e-06 26.5 0.1 0.00016 21.2 0.0 2.8 1 1 2 3 3 3 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1e PF01406.19 gi|568164029|ref|YP_008947468.1| - 0.0092 15.4 0.0 0.83 8.9 0.0 2.7 3 0 0 3 3 3 1 tRNA synthetases class I (C) catalytic domain Zn-ribbon_8 PF09723.10 gi|568164029|ref|YP_008947468.1| - 0.1 12.7 0.7 5.2 7.3 0.1 2.4 2 0 0 2 2 2 0 Zinc ribbon domain zf-TFIIB PF13453.6 gi|568164029|ref|YP_008947468.1| - 0.15 11.5 0.2 6.9 6.1 0.0 2.6 2 0 0 2 2 2 0 Transcription factor zinc-finger zf-IS66 PF13005.7 gi|568164029|ref|YP_008947468.1| - 0.63 10.5 2.4 25 5.4 0.1 2.8 2 0 0 2 2 2 0 zinc-finger binding domain of transposase IS66 NAD_binding_8 PF13450.6 gi|568164030|ref|YP_008947469.1| - 0.0011 19.1 0.0 0.0021 18.2 0.0 1.4 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Trp_halogenase PF04820.14 gi|568164030|ref|YP_008947469.1| - 0.03 13.2 0.0 0.33 9.7 0.0 2.0 2 0 0 2 2 2 0 Tryptophan halogenase DUF4367 PF14285.6 gi|568164031|ref|YP_008947470.1| - 0.052 14.0 0.2 0.5 10.8 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4367) DUF2675 PF11247.8 gi|568164876|ref|YP_008947471.1| - 0.0063 16.6 0.0 0.0073 16.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2675) TraT PF05818.12 gi|568164876|ref|YP_008947471.1| - 0.008 15.9 0.1 0.17 11.5 0.1 2.0 2 0 0 2 2 2 1 Enterobacterial TraT complement resistance protein Arm-DNA-bind_2 PF12167.8 gi|568164876|ref|YP_008947471.1| - 0.092 12.7 0.0 0.13 12.2 0.0 1.2 1 0 0 1 1 1 0 Arm DNA-binding domain Prok-RING_1 PF14446.6 gi|568164032|ref|YP_008947473.1| - 2.6e-05 24.0 2.4 0.0035 17.2 0.4 2.2 2 0 0 2 2 2 1 Prokaryotic RING finger family 1 DZR PF12773.7 gi|568164032|ref|YP_008947473.1| - 0.00078 19.4 6.6 0.13 12.3 6.6 2.2 1 1 0 1 1 1 1 Double zinc ribbon zf-C3HC4_3 PF13920.6 gi|568164032|ref|YP_008947473.1| - 0.0015 18.4 9.2 1.9 8.4 9.4 2.3 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn-ribbon_8 PF09723.10 gi|568164032|ref|YP_008947473.1| - 0.003 17.6 5.2 0.0045 17.1 3.3 1.9 2 0 0 2 2 2 1 Zinc ribbon domain zinc_ribbon_9 PF14369.6 gi|568164032|ref|YP_008947473.1| - 0.0052 17.0 4.0 0.43 10.9 0.7 2.3 2 0 0 2 2 2 1 zinc-ribbon zf-ribbon_3 PF13248.6 gi|568164032|ref|YP_008947473.1| - 0.012 15.0 10.1 0.025 14.0 0.3 3.1 2 1 0 2 2 2 0 zinc-ribbon domain HypA PF01155.19 gi|568164032|ref|YP_008947473.1| - 0.016 15.2 5.6 0.063 13.3 0.8 2.0 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn_ribbon_SprT PF17283.2 gi|568164032|ref|YP_008947473.1| - 0.022 14.6 7.7 2.1 8.3 0.3 3.1 3 0 0 3 3 3 0 SprT-like zinc ribbon domain zf-H2C2_2 PF13465.6 gi|568164032|ref|YP_008947473.1| - 0.023 15.1 7.3 0.15 12.5 0.4 3.1 3 0 0 3 3 3 0 Zinc-finger double domain DUF1272 PF06906.11 gi|568164032|ref|YP_008947473.1| - 0.029 14.5 7.3 0.13 12.3 7.3 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF1272) DNA_ligase_ZBD PF03119.16 gi|568164032|ref|YP_008947473.1| - 0.032 14.2 1.6 0.74 9.9 0.2 2.6 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain zf-C2HC5 PF06221.13 gi|568164032|ref|YP_008947473.1| - 0.039 14.0 5.7 0.049 13.6 0.1 2.3 1 1 1 2 2 2 0 Putative zinc finger motif, C2HC5-type DUF4379 PF14311.6 gi|568164032|ref|YP_008947473.1| - 0.047 14.1 3.0 0.047 14.1 3.0 1.6 1 1 0 1 1 1 0 Probable Zinc-ribbon domain Rep_fac-A_C PF08646.10 gi|568164032|ref|YP_008947473.1| - 0.049 13.4 2.3 0.063 13.0 2.3 1.2 1 0 0 1 1 1 0 Replication factor-A C terminal domain zf-tcix PF14952.6 gi|568164032|ref|YP_008947473.1| - 0.051 13.2 0.3 0.051 13.2 0.3 2.4 2 1 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding Nop10p PF04135.12 gi|568164032|ref|YP_008947473.1| - 0.063 13.3 5.0 0.94 9.6 5.0 2.2 1 1 0 1 1 1 0 Nucleolar RNA-binding protein, Nop10p family zinc_ribbon_2 PF13240.6 gi|568164032|ref|YP_008947473.1| - 0.065 13.0 0.8 0.065 13.0 0.8 3.4 4 0 0 4 4 3 0 zinc-ribbon domain C1_2 PF03107.16 gi|568164032|ref|YP_008947473.1| - 0.12 12.7 8.4 0.065 13.6 3.7 2.2 1 1 1 2 2 2 0 C1 domain Cys_rich_CPXG PF14255.6 gi|568164032|ref|YP_008947473.1| - 0.19 11.7 5.8 1.6 8.7 0.1 3.0 3 0 0 3 3 3 0 Cysteine-rich CPXCG Sgf11 PF08209.11 gi|568164032|ref|YP_008947473.1| - 0.28 10.8 8.0 2.8 7.6 0.5 3.1 3 0 0 3 3 3 0 Sgf11 (transcriptional regulation protein) UPF0547 PF10571.9 gi|568164032|ref|YP_008947473.1| - 0.33 11.1 0.2 0.33 11.1 0.2 2.9 3 1 0 3 3 3 0 Uncharacterised protein family UPF0547 zf-AN1 PF01428.16 gi|568164032|ref|YP_008947473.1| - 0.36 11.0 9.5 0.68 10.1 3.7 2.4 1 1 1 2 2 2 0 AN1-like Zinc finger zf-BED PF02892.15 gi|568164032|ref|YP_008947473.1| - 0.4 10.8 12.3 7.6 6.7 0.2 3.1 1 1 1 2 2 2 0 BED zinc finger zf-RING_4 PF14570.6 gi|568164032|ref|YP_008947473.1| - 0.42 10.4 9.3 0.52 10.1 3.4 2.1 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain Mu-like_Com PF10122.9 gi|568164032|ref|YP_008947473.1| - 0.56 9.7 9.9 0.26 10.7 0.8 2.3 1 1 1 2 2 2 0 Mu-like prophage protein Com zf-Di19 PF05605.12 gi|568164032|ref|YP_008947473.1| - 0.62 10.4 9.7 2.9 8.3 0.2 3.1 2 1 1 3 3 3 0 Drought induced 19 protein (Di19), zinc-binding TF_Zn_Ribbon PF08271.12 gi|568164032|ref|YP_008947473.1| - 0.71 9.4 9.4 2.7 7.6 0.4 2.9 3 0 0 3 3 3 0 TFIIB zinc-binding zf-C2H2 PF00096.26 gi|568164032|ref|YP_008947473.1| - 0.75 10.4 11.7 5.6 7.6 2.1 3.2 3 0 0 3 3 3 0 Zinc finger, C2H2 type OrfB_Zn_ribbon PF07282.11 gi|568164032|ref|YP_008947473.1| - 0.91 9.5 6.4 2 8.4 1.4 2.2 1 1 1 2 2 2 0 Putative transposase DNA-binding domain zf-TFIIB PF13453.6 gi|568164032|ref|YP_008947473.1| - 1.1 8.7 6.6 4.2 6.8 0.1 2.4 2 1 1 3 3 3 0 Transcription factor zinc-finger zf-C2H2_4 PF13894.6 gi|568164032|ref|YP_008947473.1| - 1.3 10.1 13.0 7.6 7.7 0.1 3.4 3 0 0 3 3 3 0 C2H2-type zinc finger ADK_lid PF05191.14 gi|568164032|ref|YP_008947473.1| - 1.5 8.9 8.3 0.57 10.2 4.4 2.2 2 1 0 2 2 2 0 Adenylate kinase, active site lid TFIIS_C PF01096.18 gi|568164032|ref|YP_008947473.1| - 1.7 8.6 8.4 1 9.3 0.5 2.7 3 0 0 3 3 3 0 Transcription factor S-II (TFIIS) zf-B_box PF00643.24 gi|568164032|ref|YP_008947473.1| - 1.7 8.8 10.5 6.5 7.0 6.2 2.8 2 1 0 2 2 2 0 B-box zinc finger CpXC PF14353.6 gi|568164032|ref|YP_008947473.1| - 2 8.5 7.5 4.8 7.2 0.8 2.7 1 1 2 3 3 3 0 CpXC protein zinc_ribbon_4 PF13717.6 gi|568164032|ref|YP_008947473.1| - 2.3 8.2 11.6 2.9 7.9 7.5 2.7 2 1 0 2 2 2 0 zinc-ribbon domain zf-IS66 PF13005.7 gi|568164032|ref|YP_008947473.1| - 2.6 8.5 9.9 3.1 8.3 0.1 2.9 2 1 1 3 3 3 0 zinc-finger binding domain of transposase IS66 zf-RING_5 PF14634.6 gi|568164032|ref|YP_008947473.1| - 3.4 7.7 11.3 1 9.4 0.4 2.8 1 1 2 3 3 3 0 zinc-RING finger domain zf-C2HC_2 PF13913.6 gi|568164032|ref|YP_008947473.1| - 6.1 6.9 17.1 6.5 6.8 0.6 3.2 3 0 0 3 3 3 0 zinc-finger of a C2HC-type NRDD PF13597.6 gi|568164032|ref|YP_008947473.1| - 8.4 5.0 8.1 8.3 5.1 3.0 2.0 1 1 1 2 2 2 0 Anaerobic ribonucleoside-triphosphate reductase Alpha-amylase PF00128.24 gi|568164033|ref|YP_008947474.1| - 2.3e-22 80.0 11.1 3.4e-20 72.9 1.7 3.3 1 1 0 2 2 2 2 Alpha amylase, catalytic domain DUF1953 PF09196.10 gi|568164033|ref|YP_008947474.1| - 9.1e-13 47.8 0.4 2.5e-12 46.4 0.4 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF1953) GIY-YIG PF01541.24 gi|568164033|ref|YP_008947474.1| - 0.0013 18.9 2.3 0.006 16.8 2.3 2.1 1 0 0 1 1 1 1 GIY-YIG catalytic domain EF-hand_10 PF14788.6 gi|568164033|ref|YP_008947474.1| - 0.072 13.0 0.4 0.36 10.7 0.1 2.2 2 0 0 2 2 2 0 EF hand CBM_48 PF02922.18 gi|568164034|ref|YP_008947475.1| - 5.3e-20 71.6 0.2 5.4e-19 68.3 0.0 2.7 3 0 0 3 3 3 1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Alpha-amylase PF00128.24 gi|568164034|ref|YP_008947475.1| - 2.5e-16 60.2 0.6 5.7e-12 45.9 0.6 3.3 1 1 0 1 1 1 1 Alpha amylase, catalytic domain GlgX_C PF18390.1 gi|568164034|ref|YP_008947475.1| - 0.0028 17.4 0.0 0.081 12.7 0.0 2.4 2 0 0 2 2 2 1 Glycogen debranching enzyme C-terminal domain HscB_4_cys PF18256.1 gi|568164034|ref|YP_008947475.1| - 0.3 10.9 0.6 1 9.2 0.0 2.1 2 0 0 2 2 2 0 Co-chaperone HscB tetracysteine metal binding motif Alpha-amylase PF00128.24 gi|568164035|ref|YP_008947476.1| - 5.2e-32 111.7 5.0 2.3e-22 80.1 0.1 3.4 4 0 0 4 4 4 3 Alpha amylase, catalytic domain Alpha-amyl_C PF09071.10 gi|568164035|ref|YP_008947476.1| - 2.3e-27 94.6 0.5 6.2e-27 93.3 0.5 1.8 1 0 0 1 1 1 1 Alpha-amylase, C terminal CBM_48 PF02922.18 gi|568164035|ref|YP_008947476.1| - 0.00093 19.5 0.0 0.0025 18.1 0.0 1.7 1 0 0 1 1 1 1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SOGA PF11365.8 gi|568164878|ref|YP_008947477.1| - 0.0099 17.0 3.9 0.015 16.4 3.2 1.6 1 1 0 1 1 1 1 Protein SOGA CaM_binding PF07839.11 gi|568164878|ref|YP_008947477.1| - 0.1 13.4 2.7 0.16 12.7 2.7 1.4 1 1 0 1 1 1 0 Plant calmodulin-binding domain TSC22 PF01166.18 gi|568164878|ref|YP_008947477.1| - 0.12 12.7 10.2 0.096 13.0 1.2 3.0 1 1 1 2 2 2 0 TSC-22/dip/bun family IZUMO PF15005.6 gi|568164878|ref|YP_008947477.1| - 0.29 11.6 2.4 0.4 11.2 2.4 1.3 1 0 0 1 1 1 0 Izumo sperm-egg fusion, Ig domain-associated DUF1635 PF07795.11 gi|568164878|ref|YP_008947477.1| - 0.84 9.5 7.7 0.56 10.0 5.9 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1635) DUF434 PF04256.12 gi|568164036|ref|YP_008947478.1| - 1.8e-23 82.0 2.6 3e-23 81.2 2.6 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF434) DUF5616 PF18481.1 gi|568164036|ref|YP_008947478.1| - 3e-23 82.7 0.3 5e-23 82.0 0.3 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF5616) tRNA-synt_2c PF01411.19 gi|568164037|ref|YP_008947479.1| - 3.7e-117 392.1 0.0 5.2e-117 391.6 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class II (A) tRNA_SAD PF07973.14 gi|568164037|ref|YP_008947479.1| - 2.7e-11 43.4 0.9 6.8e-11 42.1 0.9 1.7 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain DHHA1 PF02272.19 gi|568164037|ref|YP_008947479.1| - 4e-06 27.3 2.1 1.4e-05 25.6 2.1 1.9 1 0 0 1 1 1 1 DHHA1 domain Fib_alpha PF08702.10 gi|568164037|ref|YP_008947479.1| - 1.5 9.0 11.6 0.39 10.9 5.8 2.7 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family Ribosomal_60s PF00428.19 gi|568164038|ref|YP_008947480.1| - 2.1e-20 73.1 10.3 2.4e-20 72.9 10.3 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein PepSY_2 PF13670.6 gi|568164038|ref|YP_008947480.1| - 0.0025 17.8 2.2 0.95 9.5 0.6 2.2 2 0 0 2 2 2 2 Peptidase propeptide and YPEB domain EF-hand_14 PF17959.1 gi|568164038|ref|YP_008947480.1| - 0.0059 16.9 0.2 0.01 16.1 0.0 1.5 2 0 0 2 2 2 1 EF-hand domain PhetRS_B1 PF18262.1 gi|568164038|ref|YP_008947480.1| - 0.14 12.4 0.4 0.25 11.6 0.4 1.6 1 1 0 1 1 1 0 Phe-tRNA synthetase beta subunit B1 domain Ribosomal_L10 PF00466.20 gi|568164039|ref|YP_008947481.1| - 6.3e-27 93.7 0.8 1.6e-26 92.4 0.8 1.7 1 0 0 1 1 1 1 Ribosomal protein L10 RL10P_insert PF17777.1 gi|568164039|ref|YP_008947481.1| - 7.2e-18 64.4 0.2 2.1e-17 62.9 0.2 1.9 2 0 0 2 2 2 1 Insertion domain in 60S ribosomal protein L10P Ribosomal_60s PF00428.19 gi|568164039|ref|YP_008947481.1| - 3.7 8.2 11.1 13 6.5 11.1 2.1 1 1 0 1 1 1 0 60s Acidic ribosomal protein Ribosomal_L1 PF00687.21 gi|568164040|ref|YP_008947482.1| - 7.2e-36 123.8 1.4 8.9e-36 123.5 1.4 1.0 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family Ribosomal_L11_N PF03946.14 gi|568164041|ref|YP_008947483.1| - 1.1e-21 76.4 0.7 1.1e-21 76.4 0.7 1.7 2 0 0 2 2 2 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.19 gi|568164041|ref|YP_008947483.1| - 7.9e-19 67.9 0.7 1.6e-18 66.9 0.7 1.5 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain Flagellin_IN PF07196.13 gi|568164041|ref|YP_008947483.1| - 0.076 13.2 1.3 8 6.7 0.0 2.8 3 0 0 3 3 3 0 Flagellin hook IN motif FlaG PF03646.15 gi|568164041|ref|YP_008947483.1| - 0.5 10.6 4.0 14 5.9 0.3 2.5 1 1 1 2 2 2 0 FlaG protein Spt5-NGN PF03439.13 gi|568164042|ref|YP_008947484.1| - 6.4e-22 77.2 0.7 9.7e-21 73.5 0.1 2.0 2 0 0 2 2 2 1 Early transcription elongation factor of RNA pol II, NGN section KOW PF00467.29 gi|568164042|ref|YP_008947484.1| - 1.5e-07 31.1 0.1 3.2e-07 30.1 0.1 1.7 1 0 0 1 1 1 1 KOW motif ATP-synt_ab_Xtn PF16886.5 gi|568164042|ref|YP_008947484.1| - 0.098 12.5 1.4 1.1 9.2 0.2 2.0 1 1 1 2 2 2 0 ATPsynthase alpha/beta subunit N-term extension NusG PF02357.19 gi|568164042|ref|YP_008947484.1| - 0.37 11.3 3.4 4.2 8.0 0.2 2.9 2 1 0 2 2 2 0 Transcription termination factor nusG M11L PF11099.8 gi|568164043|ref|YP_008947485.1| - 0.0031 17.8 0.2 0.0036 17.6 0.2 1.0 1 0 0 1 1 1 1 Apoptosis regulator M11L like SecE PF00584.20 gi|568164043|ref|YP_008947485.1| - 0.021 14.7 0.1 0.024 14.6 0.1 1.1 1 0 0 1 1 1 0 SecE/Sec61-gamma subunits of protein translocation complex Lambda_CIII PF02061.16 gi|568164043|ref|YP_008947485.1| - 0.033 14.2 0.4 0.054 13.6 0.4 1.3 1 0 0 1 1 1 0 Lambda Phage CIII SRP54 PF00448.22 gi|568164044|ref|YP_008947486.1| - 1.4e-73 246.7 0.0 1.4e-73 246.7 0.0 1.9 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain SRP54_N PF02881.19 gi|568164044|ref|YP_008947486.1| - 1.5e-12 47.5 3.4 1.5e-12 47.5 3.4 3.1 4 0 0 4 4 3 1 SRP54-type protein, helical bundle domain AAA_30 PF13604.6 gi|568164044|ref|YP_008947486.1| - 2.4e-06 27.4 0.0 4.4e-06 26.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain cobW PF02492.19 gi|568164044|ref|YP_008947486.1| - 3.4e-05 23.5 0.1 7.6e-05 22.4 0.1 1.5 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_17 PF13207.6 gi|568164044|ref|YP_008947486.1| - 9.5e-05 22.8 0.0 9.5e-05 22.8 0.0 3.0 2 1 1 3 3 3 1 AAA domain AAA PF00004.29 gi|568164044|ref|YP_008947486.1| - 0.00033 21.1 0.9 0.0013 19.1 0.1 2.4 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|568164044|ref|YP_008947486.1| - 0.00066 20.1 0.8 0.0019 18.6 0.1 2.1 1 1 1 2 2 2 1 AAA ATPase domain NTPase_1 PF03266.15 gi|568164044|ref|YP_008947486.1| - 0.0012 18.8 9.2 0.016 15.2 0.5 3.4 1 1 1 3 3 3 1 NTPase AAA_22 PF13401.6 gi|568164044|ref|YP_008947486.1| - 0.0022 18.3 3.1 0.0025 18.1 0.1 2.5 2 2 0 2 2 2 1 AAA domain AAA_19 PF13245.6 gi|568164044|ref|YP_008947486.1| - 0.0024 18.2 0.0 0.0052 17.1 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|568164044|ref|YP_008947486.1| - 0.0046 17.1 3.5 0.0096 16.1 0.0 2.7 3 0 0 3 3 3 1 AAA domain MeaB PF03308.16 gi|568164044|ref|YP_008947486.1| - 0.0051 15.8 0.1 0.072 12.1 0.1 2.4 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB Zeta_toxin PF06414.12 gi|568164044|ref|YP_008947486.1| - 0.0083 15.4 0.0 0.024 13.9 0.0 1.8 1 0 0 1 1 1 1 Zeta toxin RsgA_GTPase PF03193.16 gi|568164044|ref|YP_008947486.1| - 0.012 15.6 0.3 0.012 15.6 0.3 2.4 3 0 0 3 3 3 0 RsgA GTPase MMR_HSR1 PF01926.23 gi|568164044|ref|YP_008947486.1| - 0.021 14.9 3.1 0.039 14.0 1.1 2.5 1 1 1 2 2 2 0 50S ribosome-binding GTPase MobB PF03205.14 gi|568164044|ref|YP_008947486.1| - 0.021 14.7 0.1 0.071 13.0 0.1 2.0 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_7 PF12775.7 gi|568164044|ref|YP_008947486.1| - 0.027 14.0 0.5 0.027 14.0 0.5 2.1 2 1 0 2 2 2 0 P-loop containing dynein motor region APS_kinase PF01583.20 gi|568164044|ref|YP_008947486.1| - 0.028 14.3 0.0 0.065 13.1 0.0 1.6 1 0 0 1 1 1 0 Adenylylsulphate kinase T2SSE PF00437.20 gi|568164044|ref|YP_008947486.1| - 0.035 13.2 1.6 0.051 12.6 1.4 1.5 1 1 0 1 1 1 0 Type II/IV secretion system protein CbiA PF01656.23 gi|568164044|ref|YP_008947486.1| - 0.045 13.8 4.8 0.22 11.6 0.3 3.1 2 2 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain NB-ARC PF00931.22 gi|568164044|ref|YP_008947486.1| - 0.064 12.4 0.5 0.064 12.4 0.5 2.4 1 1 1 2 2 2 0 NB-ARC domain AAA_28 PF13521.6 gi|568164044|ref|YP_008947486.1| - 0.13 12.5 0.5 1.8 8.8 0.0 2.6 3 0 0 3 3 2 0 AAA domain Thymidylate_kin PF02223.17 gi|568164044|ref|YP_008947486.1| - 0.16 11.6 0.0 0.16 11.6 0.0 3.5 3 1 0 3 3 2 0 Thymidylate kinase DUF4661 PF15576.6 gi|568164044|ref|YP_008947486.1| - 0.24 11.3 1.8 0.39 10.6 1.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4661) Viral_helicase1 PF01443.18 gi|568164044|ref|YP_008947486.1| - 0.32 10.7 0.0 0.32 10.7 0.0 2.2 2 1 0 2 2 2 0 Viral (Superfamily 1) RNA helicase AAA_18 PF13238.6 gi|568164044|ref|YP_008947486.1| - 0.56 10.7 6.5 0.94 10.0 0.0 3.3 2 1 1 3 3 3 0 AAA domain Prefoldin PF02996.17 gi|568164045|ref|YP_008947487.1| - 1.2e-26 93.0 4.2 1.2e-26 93.0 4.2 1.4 1 1 0 1 1 1 1 Prefoldin subunit BppU_IgG PF18667.1 gi|568164045|ref|YP_008947487.1| - 0.0039 17.3 0.0 0.0058 16.8 0.0 1.3 1 0 0 1 1 1 1 Baseplate upper protein immunoglobulin like domain NPV_P10 PF05531.12 gi|568164045|ref|YP_008947487.1| - 0.018 15.5 2.0 0.81 10.2 0.1 2.3 2 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein FAP206 PF12018.8 gi|568164045|ref|YP_008947487.1| - 0.032 13.7 1.8 0.19 11.2 0.7 2.1 2 0 0 2 2 2 0 Domain of unknown function DUF948 PF06103.11 gi|568164045|ref|YP_008947487.1| - 0.035 14.4 0.5 2.4 8.5 0.0 2.2 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) HHH_6 PF14579.6 gi|568164045|ref|YP_008947487.1| - 0.046 14.0 0.1 0.12 12.6 0.1 1.9 1 1 0 1 1 1 0 Helix-hairpin-helix motif DUF4795 PF16043.5 gi|568164045|ref|YP_008947487.1| - 0.052 13.1 2.5 0.065 12.8 2.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) DUF5320 PF17253.2 gi|568164045|ref|YP_008947487.1| - 0.076 14.1 2.5 8.5 7.5 0.8 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5320) SURF6 PF04935.12 gi|568164045|ref|YP_008947487.1| - 0.089 12.6 1.2 0.16 11.8 1.2 1.6 1 1 0 1 1 1 0 Surfeit locus protein 6 DUF4164 PF13747.6 gi|568164045|ref|YP_008947487.1| - 0.096 13.0 1.9 2.8 8.3 0.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4164) Muted PF14942.6 gi|568164045|ref|YP_008947487.1| - 0.19 12.0 3.0 8.8 6.7 0.1 2.2 2 0 0 2 2 2 0 Organelle biogenesis, Muted-like protein DUF148 PF02520.17 gi|568164045|ref|YP_008947487.1| - 0.22 11.6 6.8 1.5 9.0 0.9 2.2 2 0 0 2 2 2 0 Domain of unknown function DUF148 DUF2205 PF10224.9 gi|568164045|ref|YP_008947487.1| - 0.33 11.0 4.4 0.15 12.1 0.6 2.1 2 0 0 2 2 2 0 Short coiled-coil protein CorA PF01544.18 gi|568164045|ref|YP_008947487.1| - 0.49 9.7 5.2 0.88 8.8 0.7 2.0 1 1 1 2 2 2 0 CorA-like Mg2+ transporter protein KID PF02524.14 gi|568164045|ref|YP_008947487.1| - 1.1 9.6 4.2 16 6.1 0.0 3.3 3 0 0 3 3 3 0 KID repeat Ribosomal_L18A PF01775.17 gi|568164046|ref|YP_008947488.1| - 6.5e-12 45.6 0.8 1.1e-11 44.9 0.8 1.4 1 1 0 1 1 1 1 Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A Ribosomal_S4 PF00163.19 gi|568164046|ref|YP_008947488.1| - 0.036 15.0 0.2 0.041 14.8 0.2 1.2 1 0 0 1 1 1 0 Ribosomal protein S4/S9 N-terminal domain eIF-6 PF01912.18 gi|568164047|ref|YP_008947489.1| - 1.3e-62 210.7 9.3 1.6e-62 210.4 9.3 1.2 1 0 0 1 1 1 1 eIF-6 family Ribosomal_L31e PF01198.19 gi|568164048|ref|YP_008947490.1| - 8.6e-07 29.1 2.8 1.7e-06 28.1 2.8 1.5 1 0 0 1 1 1 1 Ribosomal protein L31e DUF305 PF03713.13 gi|568164048|ref|YP_008947490.1| - 0.0087 16.2 0.8 0.01 16.0 0.8 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF305) RPN2_C PF18004.1 gi|568164048|ref|YP_008947490.1| - 0.018 15.0 9.8 0.021 14.8 9.8 1.1 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain ACCA PF03255.14 gi|568164048|ref|YP_008947490.1| - 0.035 14.0 4.4 0.046 13.6 4.4 1.2 1 0 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ST7 PF04184.12 gi|568164048|ref|YP_008947490.1| - 0.042 12.3 3.5 0.046 12.2 3.5 1.1 1 0 0 1 1 1 0 ST7 protein NtA PF03146.15 gi|568164048|ref|YP_008947490.1| - 0.24 11.3 2.0 0.39 10.6 2.0 1.5 1 1 0 1 1 1 0 Agrin NtA domain Peptidase_S49_N PF08496.10 gi|568164048|ref|YP_008947490.1| - 1.3 9.1 7.1 1.7 8.7 7.1 1.2 1 0 0 1 1 1 0 Peptidase family S49 N-terminal Presenilin PF01080.17 gi|568164048|ref|YP_008947490.1| - 4.6 5.9 6.1 4.7 5.9 6.1 1.1 1 0 0 1 1 1 0 Presenilin Ribosomal_L39 PF00832.20 gi|568164049|ref|YP_008947491.1| - 1e-19 69.8 7.6 1.2e-19 69.6 7.6 1.1 1 0 0 1 1 1 1 Ribosomal L39 protein dsDNA_bind PF01984.20 gi|568164050|ref|YP_008947492.1| - 7.9e-27 93.7 15.5 9.8e-27 93.4 15.5 1.1 1 0 0 1 1 1 1 Double-stranded DNA-binding domain 4HB_MCP_1 PF12729.7 gi|568164050|ref|YP_008947492.1| - 0.018 14.6 8.1 0.022 14.3 8.1 1.1 1 0 0 1 1 1 0 Four helix bundle sensory module for signal transduction DUF4355 PF14265.6 gi|568164050|ref|YP_008947492.1| - 0.27 11.5 13.9 0.13 12.5 7.8 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4355) T2SSF PF00482.23 gi|568164050|ref|YP_008947492.1| - 2.4 8.1 7.0 1 9.3 2.2 2.2 2 1 0 2 2 2 0 Type II secretion system (T2SS), protein F Tfb5 PF06331.12 gi|568164050|ref|YP_008947492.1| - 6.5 6.8 6.2 4.6 7.3 0.2 2.8 3 0 0 3 3 3 0 Transcription factor TFIIH complex subunit Tfb5 Ribosomal_S19e PF01090.19 gi|568164051|ref|YP_008947493.1| - 6.4e-48 161.9 0.0 7.4e-48 161.7 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e HTH_12 PF08461.10 gi|568164051|ref|YP_008947493.1| - 0.012 15.6 0.1 0.038 14.0 0.0 1.8 2 0 0 2 2 2 0 Ribonuclease R winged-helix domain RuvB_C PF05491.13 gi|568164051|ref|YP_008947493.1| - 0.014 15.3 0.5 0.03 14.2 0.1 1.8 2 0 0 2 2 2 0 RuvB C-terminal winged helix domain Mrr_N PF14338.6 gi|568164051|ref|YP_008947493.1| - 0.063 13.4 0.1 0.11 12.6 0.1 1.5 1 0 0 1 1 1 0 Mrr N-terminal domain TrmB PF01978.19 gi|568164051|ref|YP_008947493.1| - 0.093 12.6 0.0 0.2 11.6 0.0 1.6 1 1 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Rrf2 PF02082.20 gi|568164051|ref|YP_008947493.1| - 0.11 12.9 0.0 0.19 12.1 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator QRPTase_C PF01729.19 gi|568164052|ref|YP_008947494.1| - 1.1e-21 77.3 0.0 1.5e-21 76.9 0.0 1.2 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain NAPRTase_C PF17956.1 gi|568164052|ref|YP_008947494.1| - 1.2e-05 25.6 0.0 7.3e-05 23.2 0.0 2.1 1 1 1 2 2 2 1 Nicotinate phosphoribosyltransferase C-terminal domain QRPTase_N PF02749.16 gi|568164052|ref|YP_008947494.1| - 0.00025 21.1 0.0 0.00045 20.2 0.0 1.4 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain MazE_antitoxin PF04014.18 gi|568164053|ref|YP_008947495.1| - 4.6e-08 32.8 0.1 2.9e-07 30.3 0.0 2.3 2 0 0 2 2 2 1 Antidote-toxin recognition MazE, bacterial antitoxin PhoU PF01895.19 gi|568164053|ref|YP_008947495.1| - 0.0006 20.2 2.7 0.0006 20.2 2.7 3.0 3 1 0 3 3 3 1 PhoU domain Tsi6 PF18660.1 gi|568164053|ref|YP_008947495.1| - 0.022 14.8 1.2 1.1 9.3 0.2 2.6 2 1 0 2 2 2 0 Tsi6 DUF1542 PF07564.11 gi|568164053|ref|YP_008947495.1| - 0.072 13.2 1.3 0.21 11.7 1.3 1.8 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1542) Cytochrom_B562 PF07361.11 gi|568164053|ref|YP_008947495.1| - 0.075 13.7 0.5 0.24 12.1 0.1 2.0 2 0 0 2 2 2 0 Cytochrome b562 AbiJ_NTD4 PF18863.1 gi|568164053|ref|YP_008947495.1| - 0.18 12.3 4.4 6.8 7.1 4.3 3.0 1 1 0 1 1 1 0 AbiJ N-terminal domain 4 Exonuc_VII_L PF02601.15 gi|568164053|ref|YP_008947495.1| - 0.47 10.0 5.9 3.9 7.0 5.8 1.9 1 1 0 1 1 1 0 Exonuclease VII, large subunit DUF711 PF05167.12 gi|568164054|ref|YP_008947496.1| - 1.5e-31 109.7 0.0 3.4e-31 108.6 0.0 1.5 2 0 0 2 2 2 1 Uncharacterised ACR (DUF711) DrsE_2 PF13686.6 gi|568164055|ref|YP_008947497.1| - 3.4e-15 56.3 0.2 4.1e-09 36.5 0.0 2.0 1 1 1 2 2 2 2 DsrE/DsrF/DrsH-like family DrsE PF02635.15 gi|568164055|ref|YP_008947497.1| - 1.2e-09 38.5 0.0 1.4e-09 38.3 0.0 1.1 1 0 0 1 1 1 1 DsrE/DsrF-like family TusA PF01206.17 gi|568164056|ref|YP_008947498.1| - 1.5e-09 37.5 0.1 1.8e-09 37.2 0.1 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA FAS_I_H PF18314.1 gi|568164056|ref|YP_008947498.1| - 0.013 15.2 0.0 0.016 14.8 0.0 1.1 1 0 0 1 1 1 0 Fatty acid synthase type I helical domain CAP_N PF01213.19 gi|568164056|ref|YP_008947498.1| - 0.036 13.5 0.7 0.042 13.3 0.7 1.0 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal PALP PF00291.25 gi|568164057|ref|YP_008947499.1| - 7e-50 170.1 0.0 2.1e-49 168.6 0.0 1.6 1 1 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Pkinase PF00069.25 gi|568164059|ref|YP_008947501.1| - 0.0018 17.7 0.1 0.003 17.0 0.1 1.5 1 1 0 1 1 1 1 Protein kinase domain TF_Zn_Ribbon PF08271.12 gi|568164060|ref|YP_008947502.1| - 0.032 13.7 0.0 0.049 13.1 0.0 1.3 1 0 0 1 1 1 0 TFIIB zinc-binding Zn_ribbon_SprT PF17283.2 gi|568164060|ref|YP_008947502.1| - 0.035 14.0 0.2 0.055 13.4 0.2 1.3 1 0 0 1 1 1 0 SprT-like zinc ribbon domain Zn-ribbon_8 PF09723.10 gi|568164060|ref|YP_008947502.1| - 0.051 13.7 0.1 0.067 13.3 0.1 1.2 1 0 0 1 1 1 0 Zinc ribbon domain Radical_SAM PF04055.21 gi|568164061|ref|YP_008947503.1| - 8.2e-25 88.1 0.1 1.9e-24 86.9 0.0 1.6 2 0 0 2 2 2 1 Radical SAM superfamily Mob_synth_C PF06463.13 gi|568164061|ref|YP_008947503.1| - 1.5e-23 83.1 0.0 2.5e-23 82.4 0.0 1.4 1 0 0 1 1 1 1 Molybdenum Cofactor Synthesis C Fer4_12 PF13353.6 gi|568164061|ref|YP_008947503.1| - 1.3e-07 31.9 0.1 5.5e-07 29.9 0.0 1.9 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|568164061|ref|YP_008947503.1| - 8.3e-05 22.7 0.0 0.00016 21.7 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Peptidase_M24 PF00557.24 gi|568164062|ref|YP_008947504.1| - 8.2e-64 215.1 0.6 1e-63 214.8 0.6 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 gi|568164062|ref|YP_008947504.1| - 1.1e-16 61.7 0.0 2e-16 60.9 0.0 1.4 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain GTP_cyclohydroI PF01227.22 gi|568164063|ref|YP_008947505.1| - 1.4e-63 213.5 0.1 2e-63 213.0 0.1 1.2 1 0 0 1 1 1 1 GTP cyclohydrolase I DUF3199 PF11436.8 gi|568164063|ref|YP_008947505.1| - 0.092 12.8 0.1 0.6 10.1 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3199) KIP1 PF07765.12 gi|568164063|ref|YP_008947505.1| - 0.15 12.2 0.7 0.44 10.7 0.3 2.0 2 0 0 2 2 2 0 KIP1-like protein MarR PF01047.22 gi|568164064|ref|YP_008947506.1| - 5.6e-10 39.0 0.1 1.8e-08 34.1 0.2 2.8 3 0 0 3 3 3 1 MarR family HTH_24 PF13412.6 gi|568164064|ref|YP_008947506.1| - 3.2e-08 33.0 1.3 9e-08 31.6 0.7 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|568164064|ref|YP_008947506.1| - 1.1e-06 28.4 0.0 2.3e-06 27.4 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.20 gi|568164064|ref|YP_008947506.1| - 7.8e-06 25.7 0.5 1.5e-05 24.8 0.5 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_Crp_2 PF13545.6 gi|568164064|ref|YP_008947506.1| - 5e-05 23.2 0.2 0.00013 21.9 0.2 1.6 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain TrmB PF01978.19 gi|568164064|ref|YP_008947506.1| - 6.1e-05 22.8 0.1 0.0012 18.7 0.2 2.2 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB B-block_TFIIIC PF04182.12 gi|568164064|ref|YP_008947506.1| - 0.0015 18.6 0.1 0.023 14.9 0.2 2.3 2 0 0 2 2 2 1 B-block binding subunit of TFIIIC Cdc6_C PF09079.11 gi|568164064|ref|YP_008947506.1| - 0.0025 17.7 0.1 0.0049 16.8 0.1 1.5 1 0 0 1 1 1 1 CDC6, C terminal winged helix domain HTH_IclR PF09339.10 gi|568164064|ref|YP_008947506.1| - 0.0032 17.2 0.0 0.0055 16.5 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_36 PF13730.6 gi|568164064|ref|YP_008947506.1| - 0.0071 16.3 0.5 0.027 14.4 0.1 2.2 1 1 1 2 2 2 1 Helix-turn-helix domain TFIIE_alpha PF02002.17 gi|568164064|ref|YP_008947506.1| - 0.0094 15.8 0.6 0.0094 15.8 0.6 1.7 2 0 0 2 2 2 1 TFIIE alpha subunit HTH_9 PF08221.11 gi|568164064|ref|YP_008947506.1| - 0.018 15.1 0.1 0.035 14.2 0.1 1.5 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_46 PF15977.5 gi|568164064|ref|YP_008947506.1| - 0.021 14.8 0.7 0.054 13.5 0.5 1.8 1 1 0 1 1 1 0 Winged helix-turn-helix DNA binding HTH_27 PF13463.6 gi|568164064|ref|YP_008947506.1| - 0.062 13.8 0.1 0.13 12.8 0.1 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain DprA_WH PF17782.1 gi|568164064|ref|YP_008947506.1| - 0.063 13.4 0.0 0.1 12.7 0.0 1.3 1 0 0 1 1 1 0 DprA winged helix domain HTH_54 PF18607.1 gi|568164064|ref|YP_008947506.1| - 0.076 13.1 0.0 0.17 12.0 0.0 1.5 1 0 0 1 1 1 0 ParA helix turn helix domain Phage_rep_O PF04492.13 gi|568164064|ref|YP_008947506.1| - 0.077 13.6 0.0 0.24 12.0 0.0 1.8 1 0 0 1 1 1 0 Bacteriophage replication protein O Rrf2 PF02082.20 gi|568164064|ref|YP_008947506.1| - 0.13 12.6 0.1 0.86 10.0 0.2 2.1 2 0 0 2 2 2 0 Transcriptional regulator Gln-synt_C PF00120.24 gi|568164065|ref|YP_008947507.1| - 2.8e-134 447.5 0.0 3.5e-134 447.2 0.0 1.1 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 gi|568164065|ref|YP_008947507.1| - 3.9e-25 87.4 0.0 8.8e-25 86.3 0.0 1.6 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain ABC_tran PF00005.27 gi|568164066|ref|YP_008947508.1| - 1.2e-21 77.7 0.0 1.7e-21 77.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|568164066|ref|YP_008947508.1| - 1.5e-08 34.8 3.0 0.00012 22.1 0.2 2.3 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|568164066|ref|YP_008947508.1| - 8.9e-06 25.6 5.5 6.2e-05 22.9 5.5 2.0 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|568164066|ref|YP_008947508.1| - 1.4e-05 25.4 0.1 2.9e-05 24.4 0.1 1.5 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 gi|568164066|ref|YP_008947508.1| - 3.3e-05 24.5 0.7 3.3e-05 24.5 0.7 2.3 2 1 0 2 2 2 1 AAA domain AAA_24 PF13479.6 gi|568164066|ref|YP_008947508.1| - 0.00023 21.0 0.1 0.00029 20.6 0.1 1.4 1 1 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 gi|568164066|ref|YP_008947508.1| - 0.00042 19.6 0.0 0.001 18.4 0.0 1.6 2 0 0 2 2 2 1 Zeta toxin NB-ARC PF00931.22 gi|568164066|ref|YP_008947508.1| - 0.00085 18.6 0.9 0.0019 17.5 0.1 1.8 2 0 0 2 2 2 1 NB-ARC domain AAA_13 PF13166.6 gi|568164066|ref|YP_008947508.1| - 0.0012 17.7 0.1 0.0019 16.9 0.1 1.3 1 0 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 gi|568164066|ref|YP_008947508.1| - 0.0016 18.4 3.2 0.0078 16.1 3.2 2.1 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea NACHT PF05729.12 gi|568164066|ref|YP_008947508.1| - 0.0027 17.7 0.1 0.0047 16.9 0.1 1.4 1 0 0 1 1 1 1 NACHT domain AAA_29 PF13555.6 gi|568164066|ref|YP_008947508.1| - 0.0058 16.3 0.1 0.01 15.6 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain T2SSE PF00437.20 gi|568164066|ref|YP_008947508.1| - 0.0066 15.5 0.0 0.012 14.7 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA PF00004.29 gi|568164066|ref|YP_008947508.1| - 0.0082 16.6 0.3 0.026 15.0 0.3 2.0 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|568164066|ref|YP_008947508.1| - 0.0089 16.4 0.0 0.0097 16.3 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_18 PF13238.6 gi|568164066|ref|YP_008947508.1| - 0.0097 16.5 1.3 0.028 15.0 1.2 1.8 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|568164066|ref|YP_008947508.1| - 0.013 15.7 0.0 0.025 14.7 0.0 1.8 1 1 0 1 1 1 0 AAA domain AAA_14 PF13173.6 gi|568164066|ref|YP_008947508.1| - 0.013 15.5 5.3 4.4 7.4 5.3 2.3 1 1 0 1 1 1 0 AAA domain DUF2075 PF09848.9 gi|568164066|ref|YP_008947508.1| - 0.017 14.4 0.0 0.023 13.9 0.0 1.3 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_30 PF13604.6 gi|568164066|ref|YP_008947508.1| - 0.021 14.6 0.0 0.047 13.4 0.0 1.5 2 0 0 2 2 2 0 AAA domain PIF1 PF05970.14 gi|568164066|ref|YP_008947508.1| - 0.024 13.8 0.3 0.061 12.5 0.0 1.7 2 0 0 2 2 2 0 PIF1-like helicase Rad17 PF03215.15 gi|568164066|ref|YP_008947508.1| - 0.025 14.5 0.4 0.052 13.5 0.4 1.8 1 1 0 1 1 1 0 Rad17 P-loop domain SMC_N PF02463.19 gi|568164066|ref|YP_008947508.1| - 0.026 14.0 0.1 0.051 13.0 0.1 1.5 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 gi|568164066|ref|YP_008947508.1| - 0.036 14.3 0.0 4.1 7.7 0.0 2.5 2 0 0 2 2 2 0 Putative exonuclease SbcCD, C subunit TsaE PF02367.17 gi|568164066|ref|YP_008947508.1| - 0.041 13.9 0.1 0.072 13.1 0.1 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE PduV-EutP PF10662.9 gi|568164066|ref|YP_008947508.1| - 0.063 13.0 0.1 0.11 12.2 0.1 1.6 1 1 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation Stk19 PF10494.9 gi|568164066|ref|YP_008947508.1| - 0.084 12.5 0.1 0.11 12.1 0.1 1.1 1 0 0 1 1 1 0 Serine-threonine protein kinase 19 RsgA_GTPase PF03193.16 gi|568164066|ref|YP_008947508.1| - 0.089 12.7 0.2 0.21 11.5 0.0 1.6 2 0 0 2 2 2 0 RsgA GTPase Thioredoxin PF00085.20 gi|568164067|ref|YP_008947509.1| - 1.6e-22 79.4 0.0 2.3e-22 78.9 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|568164067|ref|YP_008947509.1| - 1.3e-06 28.8 0.9 1.7e-05 25.2 0.9 2.5 1 1 0 1 1 1 1 Thioredoxin-like domain OST3_OST6 PF04756.13 gi|568164067|ref|YP_008947509.1| - 0.0007 19.0 0.0 0.00087 18.7 0.0 1.2 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_8 PF13905.6 gi|568164067|ref|YP_008947509.1| - 0.0043 17.4 0.2 0.12 12.8 0.0 2.6 1 1 1 2 2 2 1 Thioredoxin-like Thioredoxin_3 PF13192.6 gi|568164067|ref|YP_008947509.1| - 0.011 15.8 0.1 0.029 14.4 0.0 1.7 1 1 1 2 2 2 0 Thioredoxin domain Thioredoxin_7 PF13899.6 gi|568164067|ref|YP_008947509.1| - 0.051 13.8 0.0 0.097 12.9 0.0 1.5 1 0 0 1 1 1 0 Thioredoxin-like Thioredoxin_9 PF14595.6 gi|568164067|ref|YP_008947509.1| - 0.062 13.1 0.1 0.11 12.3 0.1 1.6 1 1 0 1 1 1 0 Thioredoxin GHMP_kinases_C PF08544.13 gi|568164068|ref|YP_008947510.1| - 0.018 15.4 0.0 0.034 14.5 0.0 1.3 1 0 0 1 1 1 0 GHMP kinases C terminal GHMP_kinases_N PF00288.26 gi|568164068|ref|YP_008947510.1| - 0.038 14.2 0.1 0.064 13.5 0.1 1.4 1 0 0 1 1 1 0 GHMP kinases N terminal domain SAM_LFY PF01698.16 gi|568164068|ref|YP_008947510.1| - 0.047 13.6 0.1 0.36 10.8 0.1 2.2 1 1 1 2 2 2 0 Floricaula / Leafy protein SAM domain Methyltr_RsmB-F PF01189.17 gi|568164069|ref|YP_008947511.1| - 4.9e-36 124.3 0.0 8.3e-34 117.0 0.0 2.2 1 1 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltransf_31 PF13847.6 gi|568164069|ref|YP_008947511.1| - 6.4e-06 26.0 0.0 1.2e-05 25.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PUA PF01472.20 gi|568164069|ref|YP_008947511.1| - 9.4e-05 22.3 0.8 0.00019 21.3 0.8 1.5 1 0 0 1 1 1 1 PUA domain MTS PF05175.14 gi|568164069|ref|YP_008947511.1| - 0.043 13.4 0.0 0.35 10.4 0.0 2.1 1 1 0 1 1 1 0 Methyltransferase small domain Methyltransf_5 PF01795.19 gi|568164069|ref|YP_008947511.1| - 0.083 12.4 0.0 0.21 11.0 0.0 1.6 2 0 0 2 2 2 0 MraW methylase family Hexapep PF00132.24 gi|568164070|ref|YP_008947512.1| - 7.2e-19 66.7 15.3 2.8e-08 33.1 2.4 4.4 3 1 1 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|568164070|ref|YP_008947512.1| - 1e-06 28.4 9.2 4e-05 23.3 3.2 3.7 4 0 0 4 4 4 2 Hexapeptide repeat of succinyl-transferase Radical_SAM PF04055.21 gi|568164071|ref|YP_008947513.1| - 8.4e-15 55.5 0.1 6.9e-14 52.6 0.1 2.4 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|568164071|ref|YP_008947513.1| - 2.3e-10 40.9 0.0 9.9e-10 38.8 0.0 2.0 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|568164071|ref|YP_008947513.1| - 4e-09 36.6 0.0 1.6e-08 34.7 0.0 2.1 2 1 0 2 2 2 1 4Fe-4S single cluster domain Phage_integrase PF00589.22 gi|568164072|ref|YP_008947514.1| - 6e-37 127.1 3.0 7.3e-37 126.8 0.9 1.9 2 0 0 2 2 2 1 Phage integrase family Phage_int_SAM_4 PF13495.6 gi|568164072|ref|YP_008947514.1| - 1.2e-13 51.3 0.4 4.5e-08 33.5 0.0 2.6 1 1 1 2 2 2 2 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_1 PF02899.17 gi|568164072|ref|YP_008947514.1| - 1.8e-08 34.5 0.4 0.003 17.8 0.0 2.7 1 1 1 2 2 2 2 Phage integrase, N-terminal SAM-like domain Phage_integr_3 PF16795.5 gi|568164072|ref|YP_008947514.1| - 0.0012 18.8 1.2 0.0089 16.0 1.2 2.2 1 1 0 1 1 1 1 Archaeal phage integrase PMSI1 PF15322.6 gi|568164072|ref|YP_008947514.1| - 0.034 13.6 0.1 0.061 12.8 0.0 1.4 1 1 0 1 1 1 0 Protein missing in infertile sperm 1, putative NAPRTase_C PF17956.1 gi|568164072|ref|YP_008947514.1| - 0.18 12.2 2.1 7.9 6.9 0.1 2.4 2 1 0 2 2 2 0 Nicotinate phosphoribosyltransferase C-terminal domain Pyr_redox_2 PF07992.14 gi|568164073|ref|YP_008947516.1| - 9.3e-06 25.1 0.0 0.00097 18.5 0.0 3.1 3 1 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|568164073|ref|YP_008947516.1| - 0.00092 19.7 0.0 2.3 8.8 0.0 2.5 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|568164073|ref|YP_008947516.1| - 0.0083 15.4 0.0 0.07 12.4 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase VitK2_biosynth PF02621.14 gi|568164880|ref|YP_008947517.1| - 0.00026 20.6 0.0 0.86 9.1 0.0 2.8 1 1 2 3 3 3 2 Menaquinone biosynthesis T2SSE PF00437.20 gi|568164074|ref|YP_008947519.1| - 6.6e-42 143.4 0.0 1.7e-41 142.1 0.0 1.6 1 1 1 2 2 2 1 Type II/IV secretion system protein ABC_tran PF00005.27 gi|568164074|ref|YP_008947519.1| - 2.4e-05 24.9 0.0 6.4e-05 23.5 0.0 1.7 1 0 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 gi|568164074|ref|YP_008947519.1| - 0.00016 22.1 0.0 0.00035 21.0 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|568164074|ref|YP_008947519.1| - 0.00017 21.2 0.0 0.00045 19.9 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|568164074|ref|YP_008947519.1| - 0.00023 21.7 0.1 0.00023 21.7 0.1 2.9 3 0 0 3 3 3 1 AAA domain AAA_22 PF13401.6 gi|568164074|ref|YP_008947519.1| - 0.00026 21.3 0.0 0.0006 20.1 0.0 1.6 1 0 0 1 1 1 1 AAA domain cobW PF02492.19 gi|568164074|ref|YP_008947519.1| - 0.0009 18.9 0.1 0.0019 17.8 0.1 1.5 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain G-alpha PF00503.20 gi|568164074|ref|YP_008947519.1| - 0.0067 15.6 1.1 0.029 13.5 0.2 2.0 2 0 0 2 2 2 1 G-protein alpha subunit AAA_14 PF13173.6 gi|568164074|ref|YP_008947519.1| - 0.0077 16.3 0.3 0.037 14.1 0.0 2.3 2 0 0 2 2 2 1 AAA domain ATPase_2 PF01637.18 gi|568164074|ref|YP_008947519.1| - 0.0095 15.9 0.0 0.0095 15.9 0.0 2.8 3 1 0 3 3 3 1 ATPase domain predominantly from Archaea AAA_7 PF12775.7 gi|568164074|ref|YP_008947519.1| - 0.013 15.1 0.0 0.024 14.2 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region MMR_HSR1 PF01926.23 gi|568164074|ref|YP_008947519.1| - 0.013 15.5 0.0 0.027 14.6 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_18 PF13238.6 gi|568164074|ref|YP_008947519.1| - 0.014 16.0 0.0 0.035 14.7 0.0 1.7 1 0 0 1 1 1 0 AAA domain RNA12 PF10443.9 gi|568164074|ref|YP_008947519.1| - 0.015 14.0 0.0 0.045 12.5 0.0 1.7 2 0 0 2 2 2 0 RNA12 protein Pox_A32 PF04665.12 gi|568164074|ref|YP_008947519.1| - 0.017 14.6 0.0 0.035 13.6 0.0 1.5 1 0 0 1 1 1 0 Poxvirus A32 protein FtsK_SpoIIIE PF01580.18 gi|568164074|ref|YP_008947519.1| - 0.018 14.4 0.0 0.035 13.5 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family SRPRB PF09439.10 gi|568164074|ref|YP_008947519.1| - 0.02 14.3 0.0 0.041 13.3 0.0 1.5 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit RsgA_GTPase PF03193.16 gi|568164074|ref|YP_008947519.1| - 0.021 14.7 0.0 0.042 13.7 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_28 PF13521.6 gi|568164074|ref|YP_008947519.1| - 0.024 14.9 0.0 0.042 14.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.14 gi|568164074|ref|YP_008947519.1| - 0.036 14.1 0.0 0.075 13.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) NACHT PF05729.12 gi|568164074|ref|YP_008947519.1| - 0.04 13.8 0.0 0.086 12.8 0.0 1.5 1 0 0 1 1 1 0 NACHT domain Adeno_IVa2 PF02456.15 gi|568164074|ref|YP_008947519.1| - 0.04 12.7 0.0 0.071 11.9 0.0 1.3 1 0 0 1 1 1 0 Adenovirus IVa2 protein AAA PF00004.29 gi|568164074|ref|YP_008947519.1| - 0.054 13.9 0.0 0.12 12.8 0.0 1.7 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 gi|568164074|ref|YP_008947519.1| - 0.091 12.1 0.0 0.18 11.2 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Roc PF08477.13 gi|568164074|ref|YP_008947519.1| - 0.099 12.9 0.0 0.32 11.2 0.0 1.8 2 0 0 2 2 1 0 Ras of Complex, Roc, domain of DAPkinase PduV-EutP PF10662.9 gi|568164074|ref|YP_008947519.1| - 0.1 12.3 0.0 0.26 11.0 0.0 1.7 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation AAA_30 PF13604.6 gi|568164074|ref|YP_008947519.1| - 0.11 12.2 0.0 0.22 11.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain SMC_N PF02463.19 gi|568164074|ref|YP_008947519.1| - 0.11 11.9 0.0 0.26 10.7 0.0 1.6 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain Viral_helicase1 PF01443.18 gi|568164074|ref|YP_008947519.1| - 0.15 11.7 0.0 0.28 10.9 0.0 1.5 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase TrwB_AAD_bind PF10412.9 gi|568164074|ref|YP_008947519.1| - 0.15 10.9 0.0 0.24 10.3 0.0 1.2 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain MobB PF03205.14 gi|568164074|ref|YP_008947519.1| - 0.16 11.9 0.0 0.35 10.8 0.0 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B SpoVIF PF14069.6 gi|568164074|ref|YP_008947519.1| - 0.2 11.5 1.8 0.67 9.8 0.2 2.4 2 0 0 2 2 2 0 Stage VI sporulation protein F AAA_21 PF13304.6 gi|568164074|ref|YP_008947519.1| - 1.1 9.0 9.0 0.11 12.3 3.5 2.2 2 1 0 2 2 1 0 AAA domain, putative AbiEii toxin, Type IV TA system DUF4017 PF13209.6 gi|568164882|ref|YP_008947520.1| - 4.7 7.2 11.9 0.14 12.1 3.7 2.9 2 1 0 2 2 2 0 Protein of unknown function (DUF4017) Pilin_N PF07790.11 gi|568164075|ref|YP_008947521.1| - 0.00013 22.8 1.8 0.00024 22.0 1.8 1.4 1 0 0 1 1 1 1 Archaeal Type IV pilin, N-terminal CBM_4_9 PF02018.17 gi|568164075|ref|YP_008947521.1| - 0.016 15.5 0.1 0.026 14.8 0.1 1.4 1 1 0 1 1 1 0 Carbohydrate binding domain PL48 PF15903.5 gi|568164075|ref|YP_008947521.1| - 0.25 10.3 0.0 0.3 10.0 0.0 1.1 1 0 0 1 1 1 0 Filopodia upregulated, FAM65 WD40_3 PF15911.5 gi|568164883|ref|YP_008947522.1| - 0.063 13.3 0.1 0.13 12.3 0.1 1.6 1 0 0 1 1 1 0 WD domain, G-beta repeat Jiraiya PF15038.6 gi|568164883|ref|YP_008947522.1| - 0.079 12.4 0.0 0.12 11.8 0.0 1.4 1 1 0 1 1 1 0 Jiraiya HhH-GPD PF00730.25 gi|568164076|ref|YP_008947523.1| - 7.9e-17 61.7 0.0 1.5e-16 60.7 0.0 1.5 2 0 0 2 2 2 1 HhH-GPD superfamily base excision DNA repair protein EndIII_4Fe-2S PF10576.9 gi|568164076|ref|YP_008947523.1| - 0.00012 22.3 5.0 0.00023 21.4 5.0 1.5 1 0 0 1 1 1 1 Iron-sulfur binding domain of endonuclease III HHH_5 PF14520.6 gi|568164076|ref|YP_008947523.1| - 0.0026 18.3 0.7 0.0084 16.7 0.5 1.9 1 1 1 2 2 2 1 Helix-hairpin-helix domain HHH PF00633.23 gi|568164076|ref|YP_008947523.1| - 0.005 16.6 0.0 0.013 15.3 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif vATP-synt_AC39 PF01992.16 gi|568164076|ref|YP_008947523.1| - 0.032 13.7 0.2 0.038 13.5 0.2 1.1 1 0 0 1 1 1 0 ATP synthase (C/AC39) subunit HHH_8 PF14716.6 gi|568164076|ref|YP_008947523.1| - 0.08 13.3 0.1 0.19 12.1 0.1 1.7 1 0 0 1 1 1 0 Helix-hairpin-helix domain ParBc PF02195.18 gi|568164077|ref|YP_008947524.1| - 2.5e-08 34.1 0.0 4.2e-08 33.4 0.0 1.3 1 0 0 1 1 1 1 ParB-like nuclease domain DUF1015 PF06245.11 gi|568164077|ref|YP_008947524.1| - 6e-07 28.7 0.2 8.9e-05 21.5 0.1 3.0 1 1 1 2 2 2 2 Protein of unknown function (DUF1015) B5 PF03484.15 gi|568164077|ref|YP_008947524.1| - 0.13 12.6 0.0 0.28 11.5 0.0 1.6 1 0 0 1 1 1 0 tRNA synthetase B5 domain Glycos_transf_2 PF00535.26 gi|568164078|ref|YP_008947525.1| - 4.9e-22 78.5 0.0 7e-22 78.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.6 gi|568164078|ref|YP_008947525.1| - 1e-15 58.2 7.4 4.8e-15 56.0 7.4 2.0 1 1 0 1 1 1 1 Glycosyl transferase family group 2 Glyco_tranf_2_3 PF13641.6 gi|568164078|ref|YP_008947525.1| - 2.1e-11 44.2 0.0 3.4e-11 43.5 0.0 1.3 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|568164078|ref|YP_008947525.1| - 4.2e-11 42.8 0.1 5.9e-11 42.4 0.1 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 gi|568164078|ref|YP_008947525.1| - 2.6e-08 33.6 0.0 5.9e-08 32.4 0.0 1.6 1 1 1 2 2 2 1 Glycosyl transferase family 21 Osmo_MPGsynth PF09488.10 gi|568164078|ref|YP_008947525.1| - 0.037 12.7 0.1 0.052 12.2 0.1 1.1 1 0 0 1 1 1 0 Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth) HKR_ArcB_TM PF18415.1 gi|568164078|ref|YP_008947525.1| - 4.7 8.1 9.5 12 6.8 0.3 2.9 3 0 0 3 3 3 0 Histidine kinase receptor ArcB trans-membrane domain DEAD_assoc PF08494.11 gi|568164079|ref|YP_008947526.1| - 1.5e-55 187.9 0.0 2.6e-55 187.2 0.0 1.4 1 0 0 1 1 1 1 DEAD/H associated DEAD PF00270.29 gi|568164079|ref|YP_008947526.1| - 1.2e-28 100.0 0.0 4e-27 95.1 0.0 2.8 3 0 0 3 3 3 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|568164079|ref|YP_008947526.1| - 9.7e-17 61.3 0.1 3.3e-16 59.6 0.1 1.9 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|568164079|ref|YP_008947526.1| - 3.4e-08 33.7 0.0 1.2e-07 31.9 0.0 1.9 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit Transketolase_C PF02780.20 gi|568164079|ref|YP_008947526.1| - 0.0038 17.1 0.0 0.012 15.5 0.0 1.8 1 0 0 1 1 1 1 Transketolase, C-terminal domain AAA_19 PF13245.6 gi|568164079|ref|YP_008947526.1| - 0.012 16.0 0.0 5 7.4 0.0 2.8 2 1 0 2 2 2 0 AAA domain LapD_MoxY_N PF16448.5 gi|568164079|ref|YP_008947526.1| - 0.15 11.9 0.0 0.4 10.6 0.0 1.6 1 0 0 1 1 1 0 LapD/MoxY periplasmic domain MGS PF02142.22 gi|568164079|ref|YP_008947526.1| - 0.24 11.6 1.0 3.1 8.0 0.1 3.1 3 0 0 3 3 3 0 MGS-like domain HrcA_DNA-bdg PF03444.15 gi|568164080|ref|YP_008947527.1| - 7.5e-36 121.6 0.3 1.6e-35 120.6 0.3 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CBS PF00571.28 gi|568164080|ref|YP_008947527.1| - 6.3e-25 87.4 0.7 4.4e-13 49.4 0.6 2.6 2 0 0 2 2 2 2 CBS domain Rrf2 PF02082.20 gi|568164080|ref|YP_008947527.1| - 7.8e-09 35.8 0.4 3.4e-08 33.7 0.0 2.3 2 1 0 2 2 2 1 Transcriptional regulator eIF-1a PF01176.19 gi|568164080|ref|YP_008947527.1| - 2.6e-05 24.0 0.3 0.00057 19.7 0.2 2.5 2 0 0 2 2 2 1 Translation initiation factor 1A / IF-1 HTH_11 PF08279.12 gi|568164080|ref|YP_008947527.1| - 3.4e-05 23.7 1.1 6.5e-05 22.8 0.1 2.0 2 0 0 2 2 2 1 HTH domain TrmB PF01978.19 gi|568164080|ref|YP_008947527.1| - 0.021 14.7 0.3 0.059 13.3 0.1 1.8 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|568164080|ref|YP_008947527.1| - 0.038 13.5 0.7 0.12 11.9 0.7 2.0 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding GntR PF00392.21 gi|568164080|ref|YP_008947527.1| - 0.044 13.4 0.0 0.18 11.5 0.0 2.0 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family HTH_IclR PF09339.10 gi|568164080|ref|YP_008947527.1| - 0.049 13.4 0.0 0.1 12.4 0.0 1.6 1 0 0 1 1 1 0 IclR helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|568164080|ref|YP_008947527.1| - 0.079 12.6 0.3 0.72 9.6 0.0 2.2 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_38 PF13936.6 gi|568164080|ref|YP_008947527.1| - 0.12 12.1 0.2 0.37 10.6 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_36 PF13730.6 gi|568164080|ref|YP_008947527.1| - 0.14 12.1 0.1 0.27 11.2 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain DUF2192 PF09958.9 gi|568164081|ref|YP_008947528.1| - 5e-79 265.1 6.3 5.6e-79 264.9 6.3 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2192) Laminin_II PF06009.12 gi|568164082|ref|YP_008947529.1| - 0.0027 17.7 1.2 0.004 17.2 1.2 1.2 1 0 0 1 1 1 1 Laminin Domain II T3SS_needle_F PF09392.10 gi|568164082|ref|YP_008947529.1| - 0.0084 16.3 0.0 2.9 8.1 0.0 2.1 2 0 0 2 2 2 2 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF FlaC_arch PF05377.11 gi|568164082|ref|YP_008947529.1| - 0.022 15.1 2.0 0.048 14.1 2.0 1.5 1 0 0 1 1 1 0 Flagella accessory protein C (FlaC) DUF3896 PF13035.6 gi|568164082|ref|YP_008947529.1| - 0.063 13.4 0.9 0.096 12.9 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3896) DUF16 PF01519.16 gi|568164082|ref|YP_008947529.1| - 0.073 13.6 0.1 0.12 12.9 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function DUF16 RecC_C PF17946.1 gi|568164082|ref|YP_008947529.1| - 0.12 12.1 0.1 0.16 11.7 0.1 1.1 1 0 0 1 1 1 0 RecC C-terminal domain Macscav_rec PF03523.13 gi|568164082|ref|YP_008947529.1| - 0.16 11.9 0.3 0.29 11.0 0.3 1.5 1 0 0 1 1 1 0 Macrophage scavenger receptor bZIP_1 PF00170.21 gi|568164082|ref|YP_008947529.1| - 0.22 11.7 1.8 0.47 10.6 1.8 1.6 1 1 0 1 1 1 0 bZIP transcription factor WD40_alt PF14077.6 gi|568164082|ref|YP_008947529.1| - 0.66 9.9 3.2 1.2 9.1 1.0 2.2 1 1 1 2 2 2 0 Alternative WD40 repeat motif DivIC PF04977.15 gi|568164082|ref|YP_008947529.1| - 0.72 9.7 2.6 3.2 7.6 2.6 1.9 1 1 0 1 1 1 0 Septum formation initiator HTH_3 PF01381.22 gi|568164083|ref|YP_008947530.1| - 3.1e-07 30.3 0.7 5.9e-07 29.4 0.1 1.8 2 0 0 2 2 2 1 Helix-turn-helix HTH_11 PF08279.12 gi|568164083|ref|YP_008947530.1| - 0.001 19.0 1.5 0.0016 18.3 0.2 2.1 2 0 0 2 2 2 1 HTH domain Trp_repressor PF01371.19 gi|568164083|ref|YP_008947530.1| - 0.0011 19.1 0.1 0.0026 17.9 0.0 1.7 1 1 1 2 2 2 1 Trp repressor protein HTH_26 PF13443.6 gi|568164083|ref|YP_008947530.1| - 0.0018 18.7 0.2 0.012 16.0 0.0 2.1 2 1 0 2 2 2 1 Cro/C1-type HTH DNA-binding domain HTH_Tnp_ISL3 PF13542.6 gi|568164083|ref|YP_008947530.1| - 0.0029 17.0 0.0 0.0051 16.2 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 JIP_LZII PF16471.5 gi|568164083|ref|YP_008947530.1| - 0.0048 17.0 2.0 0.0048 17.0 2.0 1.8 2 0 0 2 2 2 1 JNK-interacting protein leucine zipper II Sigma70_r4_2 PF08281.12 gi|568164083|ref|YP_008947530.1| - 0.0049 16.5 0.2 0.0084 15.8 0.2 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 YdaS_antitoxin PF15943.5 gi|568164083|ref|YP_008947530.1| - 0.0059 16.5 0.0 0.015 15.1 0.0 1.8 1 1 0 1 1 1 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_31 PF13560.6 gi|568164083|ref|YP_008947530.1| - 0.0091 16.3 0.0 0.012 15.9 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain KORA PF16509.5 gi|568164083|ref|YP_008947530.1| - 0.014 15.6 0.3 0.028 14.7 0.1 1.7 1 1 1 2 2 2 0 TrfB plasmid transcriptional repressor HTH_AsnC-type PF13404.6 gi|568164083|ref|YP_008947530.1| - 0.021 14.6 5.5 1.5 8.7 2.1 3.3 2 1 0 2 2 2 0 AsnC-type helix-turn-helix domain LacI PF00356.21 gi|568164083|ref|YP_008947530.1| - 0.028 14.2 0.7 1.8 8.4 0.0 2.7 3 0 0 3 3 3 0 Bacterial regulatory proteins, lacI family Fe_dep_repress PF01325.19 gi|568164083|ref|YP_008947530.1| - 0.042 14.0 0.0 0.094 12.9 0.0 1.6 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain FAD_binding_1 PF00667.20 gi|568164083|ref|YP_008947530.1| - 0.054 13.1 0.2 0.057 13.0 0.2 1.1 1 0 0 1 1 1 0 FAD binding domain GP40 PF11025.8 gi|568164083|ref|YP_008947530.1| - 0.056 13.2 0.1 0.076 12.8 0.1 1.1 1 0 0 1 1 1 0 Glycoprotein GP40 of Cryptosporidium Peptidase_Prp PF04327.12 gi|568164083|ref|YP_008947530.1| - 0.056 13.7 0.3 0.072 13.3 0.3 1.4 1 0 0 1 1 1 0 Cysteine protease Prp ParB PF08775.10 gi|568164083|ref|YP_008947530.1| - 0.066 13.7 4.2 0.15 12.6 3.7 1.8 1 1 0 1 1 1 0 ParB family MarR_2 PF12802.7 gi|568164083|ref|YP_008947530.1| - 0.067 13.1 0.0 0.1 12.5 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_5 PF01022.20 gi|568164083|ref|YP_008947530.1| - 0.067 13.1 1.3 0.37 10.7 0.2 2.3 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 gi|568164083|ref|YP_008947530.1| - 0.075 12.6 0.3 0.075 12.6 0.3 3.7 3 1 1 4 4 4 0 Winged helix-turn-helix DNA-binding ENT PF03735.14 gi|568164083|ref|YP_008947530.1| - 0.076 13.1 1.8 0.19 11.8 0.7 2.3 1 1 1 2 2 2 0 ENT domain HTH_23 PF13384.6 gi|568164083|ref|YP_008947530.1| - 0.087 12.7 0.0 0.17 11.7 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain HTH_6 PF01418.17 gi|568164083|ref|YP_008947530.1| - 0.14 12.1 1.5 0.21 11.6 0.3 2.0 2 1 0 2 2 2 0 Helix-turn-helix domain, rpiR family Cauli_DNA-bind PF03310.13 gi|568164083|ref|YP_008947530.1| - 5.9 7.0 8.2 1.5 8.9 3.3 1.9 1 1 1 2 2 2 0 Caulimovirus DNA-binding protein Aminotran_1_2 PF00155.21 gi|568164085|ref|YP_008947532.1| - 2.1e-42 145.6 0.0 2.4e-42 145.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_MocR PF12897.7 gi|568164085|ref|YP_008947532.1| - 4.6e-11 42.2 0.0 6.5e-11 41.7 0.0 1.1 1 0 0 1 1 1 1 Alanine-glyoxylate amino-transferase Cys_Met_Meta_PP PF01053.20 gi|568164085|ref|YP_008947532.1| - 0.0039 15.8 0.0 0.0071 14.9 0.0 1.3 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 gi|568164085|ref|YP_008947532.1| - 0.0053 16.1 0.0 0.0085 15.4 0.0 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 gi|568164085|ref|YP_008947532.1| - 0.036 13.4 0.0 0.056 12.7 0.0 1.3 1 0 0 1 1 1 0 Beta-eliminating lyase Mst1_SARAH PF11629.8 gi|568164085|ref|YP_008947532.1| - 0.063 13.4 0.6 0.19 11.8 0.6 1.8 1 0 0 1 1 1 0 C terminal SARAH domain of Mst1 cIII PF08134.11 gi|568164085|ref|YP_008947532.1| - 0.19 11.5 0.1 0.65 9.8 0.1 1.9 1 0 0 1 1 1 0 cIII protein family MoCF_biosynth PF00994.24 gi|568164086|ref|YP_008947533.1| - 1e-27 96.6 0.1 1.6e-27 95.9 0.1 1.3 1 0 0 1 1 1 1 Probable molybdopterin binding domain DUF4261 PF14080.6 gi|568164086|ref|YP_008947533.1| - 0.05 13.7 0.7 0.27 11.4 0.0 2.4 3 0 0 3 3 3 0 Domain of unknown function (DUF4261) VirArc_Nuclease PF12187.8 gi|568164086|ref|YP_008947533.1| - 0.083 12.4 0.3 0.18 11.4 0.0 1.6 2 0 0 2 2 2 0 Viral/Archaeal nuclease Abhydrolase_1 PF00561.20 gi|568164087|ref|YP_008947534.1| - 8.5e-23 81.3 0.0 2.3e-17 63.5 0.0 2.1 1 1 1 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|568164087|ref|YP_008947534.1| - 2.7e-17 64.1 0.0 3.2e-17 63.9 0.0 1.0 1 0 0 1 1 1 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|568164087|ref|YP_008947534.1| - 2.7e-16 59.6 0.0 3.7e-16 59.1 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Thioesterase PF00975.20 gi|568164087|ref|YP_008947534.1| - 1.2e-05 25.5 0.0 4.6e-05 23.7 0.0 1.8 1 1 0 1 1 1 1 Thioesterase domain Ndr PF03096.14 gi|568164087|ref|YP_008947534.1| - 0.0004 19.2 0.0 0.0012 17.6 0.0 1.7 1 1 1 2 2 2 1 Ndr family Abhydrolase_5 PF12695.7 gi|568164087|ref|YP_008947534.1| - 0.00071 19.4 0.0 0.086 12.6 0.0 2.2 1 1 0 2 2 2 1 Alpha/beta hydrolase family DUF1057 PF06342.12 gi|568164087|ref|YP_008947534.1| - 0.0024 17.0 0.1 0.038 13.0 0.0 2.1 2 0 0 2 2 2 1 Alpha/beta hydrolase of unknown function (DUF1057) PGAP1 PF07819.13 gi|568164087|ref|YP_008947534.1| - 0.059 13.1 0.0 0.29 10.8 0.0 1.9 1 1 1 2 2 2 0 PGAP1-like protein LIDHydrolase PF10230.9 gi|568164087|ref|YP_008947534.1| - 0.1 12.1 0.0 0.19 11.3 0.0 1.4 1 0 0 1 1 1 0 Lipid-droplet associated hydrolase Peptidase_S15 PF02129.18 gi|568164087|ref|YP_008947534.1| - 0.11 12.1 0.0 0.19 11.3 0.0 1.3 1 0 0 1 1 1 0 X-Pro dipeptidyl-peptidase (S15 family) DUF1749 PF08538.10 gi|568164087|ref|YP_008947534.1| - 0.18 10.9 0.0 1.9 7.5 0.0 2.3 2 1 1 3 3 3 0 Protein of unknown function (DUF1749) tRNA_synthFbeta PF17759.1 gi|568164088|ref|YP_008947535.1| - 1.6e-32 112.7 0.0 2.8e-32 111.9 0.0 1.3 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain B5 PF03484.15 gi|568164088|ref|YP_008947535.1| - 2.1e-19 69.6 0.3 9.5e-17 61.1 0.1 2.7 2 0 0 2 2 2 2 tRNA synthetase B5 domain B3_4 PF03483.17 gi|568164088|ref|YP_008947535.1| - 6.1e-14 52.1 0.2 2.3e-13 50.2 0.1 2.0 2 0 0 2 2 2 1 B3/4 domain PhetRS_B1 PF18262.1 gi|568164088|ref|YP_008947535.1| - 0.003 17.7 0.2 16 5.8 0.0 4.0 2 2 0 2 2 2 2 Phe-tRNA synthetase beta subunit B1 domain tRNA-synt_2d PF01409.20 gi|568164089|ref|YP_008947536.1| - 3.6e-81 272.3 0.0 4.9e-81 271.8 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) TrmB PF01978.19 gi|568164089|ref|YP_008947536.1| - 1.4e-07 31.3 3.1 1.5e-06 27.9 0.8 2.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB tRNA_synthFbeta PF17759.1 gi|568164089|ref|YP_008947536.1| - 2e-07 30.7 0.0 6.4e-06 25.8 0.0 2.3 2 0 0 2 2 2 1 Phenylalanyl tRNA synthetase beta chain CLM domain HTH_34 PF13601.6 gi|568164089|ref|YP_008947536.1| - 4.2e-06 26.8 0.1 1.2e-05 25.3 0.1 1.8 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_24 PF13412.6 gi|568164089|ref|YP_008947536.1| - 6.7e-06 25.6 0.2 2.1e-05 24.0 0.2 2.0 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|568164089|ref|YP_008947536.1| - 0.00039 20.3 0.2 0.0053 16.6 0.0 2.7 2 0 0 2 2 2 1 MarR family HTH_IclR PF09339.10 gi|568164089|ref|YP_008947536.1| - 0.00043 20.0 0.0 0.0011 18.7 0.0 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain tRNA-synt_2 PF00152.20 gi|568164089|ref|YP_008947536.1| - 0.00053 19.2 0.2 0.22 10.6 0.0 2.7 3 0 0 3 3 3 2 tRNA synthetases class II (D, K and N) HTH_27 PF13463.6 gi|568164089|ref|YP_008947536.1| - 0.0034 17.9 0.1 0.041 14.4 0.0 2.9 3 1 1 4 4 4 1 Winged helix DNA-binding domain Penicillinase_R PF03965.16 gi|568164089|ref|YP_008947536.1| - 0.0034 17.7 0.4 0.37 11.1 0.0 2.9 3 0 0 3 3 3 1 Penicillinase repressor MarR_2 PF12802.7 gi|568164089|ref|YP_008947536.1| - 0.0077 16.1 2.3 0.02 14.7 0.0 2.8 3 0 0 3 3 3 1 MarR family DUF2250 PF10007.9 gi|568164089|ref|YP_008947536.1| - 0.01 15.9 0.9 0.01 15.9 0.9 2.2 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) Rrf2 PF02082.20 gi|568164089|ref|YP_008947536.1| - 0.17 12.3 0.1 0.6 10.5 0.1 1.9 1 0 0 1 1 1 0 Transcriptional regulator Lactamase_B_2 PF12706.7 gi|568164090|ref|YP_008947537.1| - 2.8e-19 69.4 0.0 3.5e-19 69.1 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|568164090|ref|YP_008947537.1| - 2.9e-17 63.0 0.0 4.4e-17 62.4 0.0 1.3 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|568164090|ref|YP_008947537.1| - 1.6e-07 31.5 0.3 4.2e-07 30.2 0.3 1.6 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily BDV_P24 PF06595.11 gi|568164090|ref|YP_008947537.1| - 0.12 12.2 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 Borna disease virus P24 protein Peptidase_M24 PF00557.24 gi|568164091|ref|YP_008947538.1| - 1.6e-43 148.8 0.0 1.9e-43 148.6 0.0 1.0 1 0 0 1 1 1 1 Metallopeptidase family M24 EntA_Immun PF08951.10 gi|568164091|ref|YP_008947538.1| - 0.11 12.9 0.0 22 5.5 0.0 2.4 2 0 0 2 2 2 0 Enterocin A Immunity Y_phosphatase2 PF03162.13 gi|568164091|ref|YP_008947538.1| - 0.15 11.6 0.0 0.24 10.9 0.0 1.2 1 0 0 1 1 1 0 Tyrosine phosphatase family DUF1512 PF07431.12 gi|568164092|ref|YP_008947539.1| - 1.3e-144 481.6 11.9 1.5e-144 481.4 11.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1512) HD PF01966.22 gi|568164093|ref|YP_008947541.1| - 3.6e-10 40.1 0.3 2e-09 37.7 0.2 2.1 2 0 0 2 2 2 1 HD domain Hydrolase_3 PF08282.12 gi|568164094|ref|YP_008947542.1| - 6.5e-27 94.9 0.2 1.2e-14 54.6 0.1 2.0 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|568164094|ref|YP_008947542.1| - 2.5e-08 34.6 3.7 0.0067 16.9 0.0 3.2 2 1 1 3 3 3 2 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|568164094|ref|YP_008947542.1| - 8.8e-07 29.2 0.2 0.0028 17.7 0.0 2.7 2 1 1 3 3 3 2 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|568164094|ref|YP_008947542.1| - 8.9e-07 29.4 2.1 0.028 14.7 0.0 3.2 2 1 1 3 3 3 2 haloacid dehalogenase-like hydrolase S6PP PF05116.13 gi|568164094|ref|YP_008947542.1| - 6.9e-06 25.8 0.1 0.00096 18.8 0.0 2.1 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase Hydrolase_like PF13242.6 gi|568164094|ref|YP_008947542.1| - 0.011 15.8 0.0 0.019 15.0 0.0 1.3 1 0 0 1 1 1 0 HAD-hyrolase-like Hydrolase_6 PF13344.6 gi|568164094|ref|YP_008947542.1| - 0.024 14.7 0.1 0.06 13.5 0.0 1.8 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase tRNA-synt_1c PF00749.21 gi|568164095|ref|YP_008947543.1| - 1.3e-80 270.6 0.1 9.3e-80 267.8 0.0 2.0 2 0 0 2 2 2 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 gi|568164095|ref|YP_008947543.1| - 8.6e-23 81.1 0.0 1.6e-22 80.2 0.0 1.5 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain Ribosomal_L7Ae PF01248.26 gi|568164096|ref|YP_008947544.1| - 1.7e-33 114.2 1.9 2.1e-33 113.9 1.9 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PELOTA_1 PF15608.6 gi|568164096|ref|YP_008947544.1| - 1.9e-06 27.6 0.1 3e-06 27.0 0.1 1.3 1 0 0 1 1 1 1 PELOTA RNA binding domain RNase_P_pop3 PF08228.11 gi|568164096|ref|YP_008947544.1| - 0.00051 20.1 0.1 0.00058 19.9 0.1 1.1 1 0 0 1 1 1 1 RNase P subunit Pop3 DbpA PF03880.15 gi|568164096|ref|YP_008947544.1| - 0.042 13.8 1.7 0.26 11.3 0.2 2.7 2 1 1 3 3 3 0 DbpA RNA binding domain SSV1_ORF_D-335 PF07935.11 gi|568164097|ref|YP_008947545.1| - 3.9e-08 33.5 0.0 3.9e-08 33.5 0.0 1.1 1 0 0 1 1 1 1 ORF D-335-like protein Clr5 PF14420.6 gi|568164097|ref|YP_008947545.1| - 0.1 12.9 0.2 0.13 12.5 0.2 1.1 1 0 0 1 1 1 0 Clr5 domain IncF PF17626.2 gi|568164885|ref|YP_008947546.1| - 0.76 10.2 4.7 0.24 11.8 1.0 2.1 2 0 0 2 2 2 0 Inclusion membrane protein F ABC_tran PF00005.27 gi|568164098|ref|YP_008947547.1| - 8.3e-34 117.1 0.0 1.4e-33 116.3 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|568164098|ref|YP_008947547.1| - 4e-12 46.6 3.0 8.1e-06 25.9 0.6 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|568164098|ref|YP_008947547.1| - 0.00011 21.8 0.1 0.059 12.8 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_18 PF13238.6 gi|568164098|ref|YP_008947547.1| - 0.0024 18.4 0.0 0.0074 16.8 0.0 1.8 1 1 1 2 2 2 1 AAA domain AAA_15 PF13175.6 gi|568164098|ref|YP_008947547.1| - 0.0024 17.6 0.6 0.039 13.6 0.0 2.1 1 1 0 2 2 2 1 AAA ATPase domain AAA PF00004.29 gi|568164098|ref|YP_008947547.1| - 0.0033 17.9 0.0 0.011 16.1 0.1 2.0 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DUF3584 PF12128.8 gi|568164098|ref|YP_008947547.1| - 0.007 14.0 0.0 0.0096 13.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) NTPase_1 PF03266.15 gi|568164098|ref|YP_008947547.1| - 0.0074 16.2 0.2 0.014 15.3 0.2 1.8 1 1 0 1 1 1 1 NTPase AAA_29 PF13555.6 gi|568164098|ref|YP_008947547.1| - 0.0087 15.8 0.1 0.016 15.0 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|568164098|ref|YP_008947547.1| - 0.015 15.8 1.6 0.032 14.7 1.6 1.9 1 1 0 1 1 1 0 AAA domain SRP54 PF00448.22 gi|568164098|ref|YP_008947547.1| - 0.022 14.4 0.6 0.047 13.3 0.1 1.7 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_28 PF13521.6 gi|568164098|ref|YP_008947547.1| - 0.031 14.5 0.1 0.062 13.5 0.1 1.5 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|568164098|ref|YP_008947547.1| - 0.043 14.2 0.0 0.054 13.9 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_30 PF13604.6 gi|568164098|ref|YP_008947547.1| - 0.076 12.7 0.0 0.18 11.5 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 gi|568164098|ref|YP_008947547.1| - 0.089 13.1 0.1 0.18 12.1 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA_5 PF07728.14 gi|568164098|ref|YP_008947547.1| - 0.12 12.3 1.0 0.77 9.8 0.2 2.1 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_24 PF13479.6 gi|568164098|ref|YP_008947547.1| - 0.13 12.0 0.1 0.33 10.6 0.1 1.7 1 0 0 1 1 1 0 AAA domain AAA_27 PF13514.6 gi|568164098|ref|YP_008947547.1| - 0.15 11.7 0.0 0.24 11.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|568164098|ref|YP_008947547.1| - 0.16 11.3 0.2 0.44 9.9 0.0 1.7 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI Zeta_toxin PF06414.12 gi|568164098|ref|YP_008947547.1| - 0.17 11.2 0.0 0.27 10.5 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin DNA_pol_B PF00136.21 gi|568164099|ref|YP_008947548.1| - 4.2e-55 187.3 6.8 6.9e-55 186.6 6.8 1.2 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.19 gi|568164099|ref|YP_008947548.1| - 3.7e-31 108.5 1.0 3.7e-31 108.5 1.0 2.0 2 0 0 2 2 2 1 DNA polymerase family B, exonuclease domain RNase_H_2 PF13482.6 gi|568164099|ref|YP_008947548.1| - 3e-06 27.3 1.2 3.8e-05 23.7 0.1 3.3 3 1 0 3 3 3 1 RNase_H superfamily DNA_pol_B_exo2 PF10108.9 gi|568164099|ref|YP_008947548.1| - 2.2e-05 24.3 0.0 4.9e-05 23.1 0.0 1.5 1 0 0 1 1 1 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB DUF2286 PF10051.9 gi|568164100|ref|YP_008947549.1| - 5.2e-52 175.3 4.3 6.1e-52 175.0 4.3 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2286) PDDEXK_10 PF07788.11 gi|568164100|ref|YP_008947549.1| - 0.027 14.4 0.1 0.055 13.4 0.1 1.5 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily DOT1 PF08123.13 gi|568164101|ref|YP_008947550.1| - 3.1e-08 33.4 0.1 4.1e-07 29.7 0.1 2.0 1 1 0 1 1 1 1 Histone methylation protein DOT1 Methyltransf_31 PF13847.6 gi|568164101|ref|YP_008947550.1| - 7e-06 25.9 0.1 1.2e-05 25.1 0.1 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|568164101|ref|YP_008947550.1| - 8.8e-06 26.3 0.0 1.6e-05 25.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|568164101|ref|YP_008947550.1| - 1.8e-05 24.7 0.1 2e-05 24.6 0.1 1.3 1 1 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|568164101|ref|YP_008947550.1| - 4.6e-05 22.9 0.0 5.8e-05 22.6 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 gi|568164101|ref|YP_008947550.1| - 0.00012 21.7 0.0 0.00016 21.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_4 PF02390.17 gi|568164101|ref|YP_008947550.1| - 0.00019 21.0 0.0 0.00022 20.7 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_15 PF09445.10 gi|568164101|ref|YP_008947550.1| - 0.0009 18.9 0.0 0.00095 18.8 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase CMAS PF02353.20 gi|568164101|ref|YP_008947550.1| - 0.0013 18.1 0.0 0.0017 17.7 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase TehB PF03848.14 gi|568164101|ref|YP_008947550.1| - 0.0043 16.5 0.0 0.0057 16.1 0.0 1.1 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_12 PF08242.12 gi|568164101|ref|YP_008947550.1| - 0.0053 17.5 0.1 0.014 16.1 0.1 1.8 1 1 0 1 1 1 1 Methyltransferase domain N6_Mtase PF02384.16 gi|568164101|ref|YP_008947550.1| - 0.006 15.9 0.0 0.0077 15.5 0.0 1.2 1 0 0 1 1 1 1 N-6 DNA Methylase Methyltransf_11 PF08241.12 gi|568164101|ref|YP_008947550.1| - 0.0064 17.1 0.0 0.012 16.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 gi|568164101|ref|YP_008947550.1| - 0.021 14.8 0.0 0.025 14.6 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain TrmK PF04816.12 gi|568164101|ref|YP_008947550.1| - 0.045 13.3 0.1 0.16 11.5 0.1 1.8 1 1 0 1 1 1 0 tRNA (adenine(22)-N(1))-methyltransferase RrnaAD PF00398.20 gi|568164101|ref|YP_008947550.1| - 0.05 12.7 0.1 0.057 12.5 0.1 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase MetW PF07021.12 gi|568164101|ref|YP_008947550.1| - 0.089 12.4 0.0 0.1 12.2 0.0 1.3 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW Cons_hypoth95 PF03602.15 gi|568164101|ref|YP_008947550.1| - 0.093 12.4 0.0 0.13 11.9 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical protein 95 CDP-OH_P_transf PF01066.21 gi|568164103|ref|YP_008947552.1| - 1.1e-10 42.1 1.7 1.1e-10 42.1 1.7 2.5 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase Orf78 PF06024.12 gi|568164103|ref|YP_008947552.1| - 5.6 7.3 10.0 0.47 10.8 2.7 2.2 2 0 0 2 2 2 0 Orf78 (ac78) DNA_primase_lrg PF04104.14 gi|568164104|ref|YP_008947553.1| - 5.1e-05 22.8 3.0 0.0034 16.8 0.3 3.1 1 1 1 2 2 2 2 Eukaryotic and archaeal DNA primase, large subunit DUF1456 PF07308.13 gi|568164104|ref|YP_008947553.1| - 0.0033 17.7 1.6 2.7 8.4 0.1 3.2 3 0 0 3 3 3 2 Protein of unknown function (DUF1456) SporV_AA PF12164.8 gi|568164104|ref|YP_008947553.1| - 0.28 11.5 5.2 3.5 8.0 0.3 2.8 3 0 0 3 3 3 0 Stage V sporulation protein AA tRNA-synt_1g PF09334.11 gi|568164105|ref|YP_008947554.1| - 1.1e-151 505.1 0.1 1.3e-151 504.8 0.1 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 gi|568164105|ref|YP_008947554.1| - 9.2e-11 40.7 0.6 4e-05 22.1 0.0 3.0 2 1 1 3 3 3 2 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|568164105|ref|YP_008947554.1| - 0.00029 20.8 0.0 0.00059 19.8 0.0 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA DZR PF12773.7 gi|568164105|ref|YP_008947554.1| - 0.27 11.3 3.6 0.59 10.2 3.6 1.5 1 0 0 1 1 1 0 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|568164105|ref|YP_008947554.1| - 2 8.2 4.9 10 6.0 0.4 2.9 2 1 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|568164105|ref|YP_008947554.1| - 5.4 6.6 9.1 12 5.4 0.7 2.9 2 1 0 2 2 2 0 zinc-ribbon domain zf-RING_7 PF02591.15 gi|568164105|ref|YP_008947554.1| - 9.7 6.5 8.0 1.8 8.8 0.3 3.1 3 0 0 3 3 3 0 C4-type zinc ribbon domain V_ATPase_I PF01496.19 gi|568164106|ref|YP_008947555.1| - 3.5e-29 101.4 14.8 1.9e-21 75.8 0.0 3.9 3 1 1 4 4 4 3 V-type ATPase 116kDa subunit family DUF4022 PF13214.6 gi|568164106|ref|YP_008947555.1| - 0.1 12.9 7.2 1.1 9.6 1.7 3.3 2 1 0 2 2 2 0 Protein of unknown function (DUF4022) DUF4200 PF13863.6 gi|568164106|ref|YP_008947555.1| - 0.98 9.8 8.0 0.23 11.9 2.6 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4200) Cep57_CLD_2 PF14197.6 gi|568164106|ref|YP_008947555.1| - 10 6.3 10.2 2.1 8.5 1.0 3.3 4 0 0 4 4 4 0 Centrosome localisation domain of PPC89 ATP-synt_F PF01990.17 gi|568164107|ref|YP_008947556.1| - 5.8e-14 52.2 0.3 6.4e-14 52.1 0.3 1.0 1 0 0 1 1 1 1 ATP synthase (F/14-kDa) subunit MMR_HSR1 PF01926.23 gi|568164107|ref|YP_008947556.1| - 0.019 15.1 0.2 0.022 14.8 0.2 1.1 1 0 0 1 1 1 0 50S ribosome-binding GTPase DRTGG PF07085.12 gi|568164107|ref|YP_008947556.1| - 0.037 13.8 0.1 0.053 13.3 0.1 1.3 1 1 0 1 1 1 0 DRTGG domain vATP-synt_E PF01991.18 gi|568164108|ref|YP_008947557.1| - 1.4e-07 31.2 13.1 3.8e-07 29.7 12.3 1.9 1 1 0 1 1 1 1 ATP synthase (E/31 kDa) subunit V-ATPase_G_2 PF16999.5 gi|568164108|ref|YP_008947557.1| - 0.005 17.2 5.0 0.0087 16.5 5.0 1.4 1 0 0 1 1 1 1 Vacuolar (H+)-ATPase G subunit Exotox-A_cataly PF09009.10 gi|568164108|ref|YP_008947557.1| - 0.12 12.1 0.5 0.53 10.0 0.1 2.2 1 1 3 4 4 4 0 Exotoxin A catalytic ETC_C1_NDUFA5 PF04716.14 gi|568164108|ref|YP_008947557.1| - 0.24 11.2 0.0 0.24 11.2 0.0 2.2 3 0 0 3 3 3 0 ETC complex I subunit conserved region SPOUT_MTase PF02590.17 gi|568164108|ref|YP_008947557.1| - 0.52 10.3 3.7 0.67 9.9 2.4 1.9 1 1 1 2 2 2 0 Predicted SPOUT methyltransferase DUF1657 PF07870.11 gi|568164108|ref|YP_008947557.1| - 0.72 9.8 4.2 13 5.8 0.1 3.7 4 1 1 5 5 5 0 Protein of unknown function (DUF1657) UBN_AB PF14075.6 gi|568164108|ref|YP_008947557.1| - 0.89 9.2 7.5 2.6 7.7 7.0 1.8 1 1 1 2 2 2 0 Ubinuclein conserved middle domain DUF445 PF04286.12 gi|568164108|ref|YP_008947557.1| - 1.3 8.7 10.1 3.9 7.2 10.1 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF445) RNase_J_C PF17770.1 gi|568164108|ref|YP_008947557.1| - 8.6 7.5 11.1 4.3 8.5 0.6 3.5 3 1 1 4 4 4 0 Ribonuclease J C-terminal domain ATP-synt_ab PF00006.25 gi|568164109|ref|YP_008947558.1| - 4.8e-86 287.8 0.0 6.5e-86 287.4 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_Xtn PF16886.5 gi|568164109|ref|YP_008947558.1| - 4.3e-46 155.7 0.1 7.8e-46 154.9 0.1 1.4 1 0 0 1 1 1 1 ATPsynthase alpha/beta subunit N-term extension ATP-synt_ab_N PF02874.23 gi|568164109|ref|YP_008947558.1| - 1.7e-12 47.7 1.8 1.7e-12 47.7 1.8 2.1 2 0 0 2 2 2 1 ATP synthase alpha/beta family, beta-barrel domain AAA_22 PF13401.6 gi|568164109|ref|YP_008947558.1| - 0.0045 17.3 0.1 0.017 15.4 0.0 2.1 2 0 0 2 2 2 1 AAA domain Biotin_lipoyl PF00364.22 gi|568164109|ref|YP_008947558.1| - 0.094 12.6 0.1 0.24 11.3 0.1 1.7 1 0 0 1 1 1 0 Biotin-requiring enzyme Esterase PF00756.20 gi|568164109|ref|YP_008947558.1| - 0.19 11.4 1.6 3.3 7.3 1.2 2.6 2 1 0 2 2 2 0 Putative esterase ATP-synt_ab PF00006.25 gi|568164110|ref|YP_008947559.1| - 4.3e-63 212.8 0.0 5.9e-63 212.4 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 gi|568164110|ref|YP_008947559.1| - 1.2e-11 44.9 0.6 2.3e-11 44.0 0.6 1.5 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain HAS-barrel PF09378.10 gi|568164110|ref|YP_008947559.1| - 0.046 13.9 0.1 0.12 12.6 0.1 1.7 1 0 0 1 1 1 0 HAS barrel domain ATP-synt_D PF01813.17 gi|568164111|ref|YP_008947560.1| - 1.5e-41 142.4 3.5 1.7e-41 142.2 3.5 1.0 1 0 0 1 1 1 1 ATP synthase subunit D DUF4763 PF15960.5 gi|568164111|ref|YP_008947560.1| - 0.055 12.8 0.2 0.15 11.4 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4763) ATP-synt_E_2 PF08112.11 gi|568164112|ref|YP_008947561.1| - 9e-16 57.9 8.2 9.6e-16 57.8 8.2 1.0 1 0 0 1 1 1 1 ATP synthase epsilon subunit VASP_tetra PF08776.11 gi|568164112|ref|YP_008947561.1| - 0.00067 19.2 3.5 0.03 13.9 0.2 2.6 2 1 1 3 3 3 2 VASP tetramerisation domain DUF3144 PF11342.8 gi|568164112|ref|YP_008947561.1| - 0.018 15.4 0.3 0.022 15.1 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3144) RapH_N PF18801.1 gi|568164112|ref|YP_008947561.1| - 0.024 14.7 1.0 0.03 14.4 0.6 1.4 1 1 0 1 1 1 0 response regulator aspartate phosphatase H, N terminal KaiA PF07688.12 gi|568164112|ref|YP_008947561.1| - 0.046 13.9 0.7 0.046 13.9 0.7 1.1 1 0 0 1 1 1 0 KaiA C-terminal domain ATP-synt_C PF00137.21 gi|568164113|ref|YP_008947562.1| - 2.4e-14 53.4 20.3 2.4e-14 53.4 20.3 1.9 2 1 0 2 2 2 1 ATP synthase subunit C tRNA-synt_2b PF00587.25 gi|568164114|ref|YP_008947563.1| - 4.2e-26 92.0 0.1 6.8e-26 91.3 0.1 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 gi|568164114|ref|YP_008947563.1| - 1e-18 67.3 0.4 2.4e-18 66.1 0.4 1.7 1 0 0 1 1 1 1 Anticodon binding domain ProRS-C_1 PF09180.11 gi|568164114|ref|YP_008947563.1| - 1.5e-15 57.1 0.3 1.5e-15 57.1 0.3 2.2 3 0 0 3 3 3 1 Prolyl-tRNA synthetase, C-terminal ProRS-C_2 PF09181.10 gi|568164114|ref|YP_008947563.1| - 0.017 15.3 0.0 0.063 13.4 0.0 2.0 1 0 0 1 1 1 0 Prolyl-tRNA synthetase, C-terminal Ribosomal_S26e PF01283.19 gi|568164115|ref|YP_008947564.1| - 3.5e-22 78.9 2.5 4e-22 78.7 2.5 1.1 1 0 0 1 1 1 1 Ribosomal protein S26e Auto_anti-p27 PF06677.12 gi|568164115|ref|YP_008947564.1| - 0.0073 16.4 5.5 0.16 12.2 0.9 2.3 2 0 0 2 2 2 2 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf_UBZ PF18439.1 gi|568164115|ref|YP_008947564.1| - 0.043 13.4 0.1 0.087 12.4 0.1 1.5 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger DUF2116 PF09889.9 gi|568164115|ref|YP_008947564.1| - 0.072 13.1 0.6 0.072 13.1 0.6 2.1 3 0 0 3 3 3 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) DZR PF12773.7 gi|568164115|ref|YP_008947564.1| - 0.21 11.6 4.2 0.8 9.8 4.2 1.8 1 1 0 1 1 1 0 Double zinc ribbon zf-dskA_traR PF01258.17 gi|568164115|ref|YP_008947564.1| - 0.36 10.8 5.9 0.37 10.8 0.5 2.4 2 0 0 2 2 2 0 Prokaryotic dksA/traR C4-type zinc finger SOR_SNZ PF01680.17 gi|568164116|ref|YP_008947565.1| - 1.4e-99 332.0 2.1 1.8e-99 331.6 2.1 1.1 1 0 0 1 1 1 1 SOR/SNZ family ThiG PF05690.14 gi|568164116|ref|YP_008947565.1| - 7.9e-06 25.4 3.7 3.6e-05 23.2 0.0 2.4 3 0 0 3 3 3 1 Thiazole biosynthesis protein ThiG NMO PF03060.15 gi|568164116|ref|YP_008947565.1| - 0.0036 16.7 1.7 0.024 14.1 0.0 2.2 2 0 0 2 2 2 1 Nitronate monooxygenase IGPS PF00218.21 gi|568164116|ref|YP_008947565.1| - 0.0044 16.2 0.0 0.26 10.4 0.0 2.2 2 0 0 2 2 2 1 Indole-3-glycerol phosphate synthase NanE PF04131.14 gi|568164116|ref|YP_008947565.1| - 0.0061 15.8 0.1 0.16 11.1 0.0 2.3 2 0 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase Dus PF01207.17 gi|568164116|ref|YP_008947565.1| - 0.0081 15.3 0.2 1.3 8.1 0.0 2.4 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) OMPdecase PF00215.24 gi|568164116|ref|YP_008947565.1| - 0.014 15.0 0.2 2.9 7.4 0.0 2.5 2 1 1 3 3 3 0 Orotidine 5'-phosphate decarboxylase / HUMPS family TetR_C_27 PF17935.1 gi|568164116|ref|YP_008947565.1| - 0.034 14.2 0.0 0.077 13.1 0.0 1.5 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain His_biosynth PF00977.21 gi|568164116|ref|YP_008947565.1| - 0.062 12.8 0.6 2.6 7.5 0.1 2.8 2 1 1 3 3 3 0 Histidine biosynthesis protein SNO PF01174.19 gi|568164117|ref|YP_008947566.1| - 3e-48 164.1 0.1 3.4e-48 164.0 0.1 1.0 1 0 0 1 1 1 1 SNO glutamine amidotransferase family GATase_3 PF07685.14 gi|568164117|ref|YP_008947566.1| - 1.4e-12 47.7 0.2 4e-11 42.9 0.2 2.7 1 1 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase PF00117.28 gi|568164117|ref|YP_008947566.1| - 6.4e-06 26.1 0.3 5.6e-05 23.0 0.3 1.9 1 1 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_S51 PF03575.17 gi|568164117|ref|YP_008947566.1| - 1.1e-05 25.2 0.0 1.4e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 Peptidase family S51 DJ-1_PfpI PF01965.24 gi|568164117|ref|YP_008947566.1| - 0.018 14.8 0.1 0.031 14.1 0.1 1.4 1 0 0 1 1 1 0 DJ-1/PfpI family T2SSE PF00437.20 gi|568164118|ref|YP_008947567.1| - 3.3e-11 42.8 0.0 5.9e-11 41.9 0.0 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_16 PF13191.6 gi|568164118|ref|YP_008947567.1| - 4.2e-05 24.0 0.0 0.0022 18.4 0.0 2.2 2 0 0 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 gi|568164118|ref|YP_008947567.1| - 0.0013 18.5 0.1 0.016 15.0 0.0 2.6 3 0 0 3 3 3 1 Holliday junction DNA helicase RuvB P-loop domain AAA_25 PF13481.6 gi|568164118|ref|YP_008947567.1| - 0.0035 16.9 0.0 0.0086 15.7 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|568164118|ref|YP_008947567.1| - 0.0036 17.9 0.6 0.015 15.9 0.0 2.4 3 1 0 3 3 2 1 AAA domain AAA_22 PF13401.6 gi|568164118|ref|YP_008947567.1| - 0.0037 17.5 0.1 0.089 13.1 0.0 2.5 2 0 0 2 2 2 1 AAA domain DnaB_C PF03796.15 gi|568164118|ref|YP_008947567.1| - 0.0046 16.3 0.1 0.012 14.9 0.0 1.7 2 0 0 2 2 2 1 DnaB-like helicase C terminal domain IstB_IS21 PF01695.17 gi|568164118|ref|YP_008947567.1| - 0.0048 16.6 0.0 0.012 15.4 0.0 1.6 1 0 0 1 1 1 1 IstB-like ATP binding protein Sigma54_activ_2 PF14532.6 gi|568164118|ref|YP_008947567.1| - 0.0051 16.9 0.0 0.014 15.5 0.0 1.8 1 0 0 1 1 1 1 Sigma-54 interaction domain AAA_5 PF07728.14 gi|568164118|ref|YP_008947567.1| - 0.0058 16.6 0.3 0.021 14.8 0.0 2.1 3 0 0 3 3 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|568164118|ref|YP_008947567.1| - 0.0065 16.9 0.0 0.024 15.1 0.0 2.0 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 gi|568164118|ref|YP_008947567.1| - 0.014 15.3 0.2 0.054 13.4 0.0 2.0 2 0 0 2 2 2 0 NACHT domain TsaE PF02367.17 gi|568164118|ref|YP_008947567.1| - 0.017 15.1 0.0 0.037 14.0 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Lon_C PF05362.13 gi|568164118|ref|YP_008947567.1| - 0.023 14.2 0.1 0.068 12.7 0.0 1.8 1 1 0 1 1 1 0 Lon protease (S16) C-terminal proteolytic domain DUF4279 PF14106.6 gi|568164118|ref|YP_008947567.1| - 0.028 14.6 0.1 0.3 11.3 0.0 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4279) NTPase_1 PF03266.15 gi|568164118|ref|YP_008947567.1| - 0.041 13.8 0.1 0.21 11.5 0.0 2.3 2 0 0 2 2 2 0 NTPase Sigma54_activat PF00158.26 gi|568164118|ref|YP_008947567.1| - 0.045 13.4 0.0 0.12 12.1 0.0 1.6 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_33 PF13671.6 gi|568164118|ref|YP_008947567.1| - 0.046 13.9 0.0 0.11 12.6 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|568164118|ref|YP_008947567.1| - 0.046 14.0 0.0 0.14 12.4 0.0 1.8 2 0 0 2 2 1 0 AAA domain Zeta_toxin PF06414.12 gi|568164118|ref|YP_008947567.1| - 0.05 12.9 0.0 0.099 11.9 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin AAA_24 PF13479.6 gi|568164118|ref|YP_008947567.1| - 0.052 13.3 0.7 0.13 12.0 0.1 2.0 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 gi|568164118|ref|YP_008947567.1| - 0.083 12.5 0.1 0.16 11.6 0.1 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_19 PF13245.6 gi|568164118|ref|YP_008947567.1| - 0.095 13.0 0.2 0.36 11.2 0.0 2.0 2 0 0 2 2 2 0 AAA domain ATP_bind_1 PF03029.17 gi|568164118|ref|YP_008947567.1| - 0.11 12.3 0.2 0.26 11.0 0.1 1.7 2 0 0 2 2 1 0 Conserved hypothetical ATP binding protein RNA_helicase PF00910.22 gi|568164118|ref|YP_008947567.1| - 0.14 12.6 0.0 0.43 11.0 0.0 2.0 1 0 0 1 1 1 0 RNA helicase Mg_chelatase PF01078.21 gi|568164118|ref|YP_008947567.1| - 0.14 11.5 0.0 0.37 10.1 0.0 1.6 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI PNK3P PF08645.11 gi|568164118|ref|YP_008947567.1| - 0.14 11.8 1.1 13 5.5 0.0 3.0 3 1 0 3 3 3 0 Polynucleotide kinase 3 phosphatase AAA_30 PF13604.6 gi|568164118|ref|YP_008947567.1| - 0.15 11.8 0.0 0.81 9.4 0.0 2.0 2 0 0 2 2 2 0 AAA domain FtsK_SpoIIIE PF01580.18 gi|568164118|ref|YP_008947567.1| - 0.15 11.4 0.0 0.28 10.5 0.0 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family Hjc PF01870.18 gi|568164119|ref|YP_008947568.1| - 2.9e-28 97.7 0.1 3.8e-28 97.3 0.1 1.2 1 0 0 1 1 1 1 Archaeal holliday junction resolvase (hjc) AHJR-like PF18743.1 gi|568164119|ref|YP_008947568.1| - 0.00011 21.8 0.0 0.00019 21.0 0.0 1.5 1 0 0 1 1 1 1 REase_AHJR-like IlvN PF07991.12 gi|568164120|ref|YP_008947569.1| - 7.9e-71 236.9 0.0 1.3e-70 236.2 0.0 1.3 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain IlvC PF01450.19 gi|568164120|ref|YP_008947569.1| - 1.9e-54 183.9 1.4 1.1e-53 181.4 2.7 1.6 2 0 0 2 2 2 1 Acetohydroxy acid isomeroreductase, catalytic domain F420_oxidored PF03807.17 gi|568164120|ref|YP_008947569.1| - 2.8e-06 27.8 0.0 1.3e-05 25.7 0.0 2.0 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 gi|568164120|ref|YP_008947569.1| - 4.7e-06 26.1 0.0 9.4e-06 25.1 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 gi|568164120|ref|YP_008947569.1| - 4.6e-05 23.6 0.0 0.00018 21.7 0.0 1.9 2 1 1 3 3 3 1 NAD binding domain of 6-phosphogluconate dehydrogenase AdoHcyase_NAD PF00670.21 gi|568164120|ref|YP_008947569.1| - 9.5e-05 22.5 0.0 0.00049 20.2 0.0 2.0 2 0 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|568164120|ref|YP_008947569.1| - 0.033 14.2 0.0 4.6 7.2 0.1 2.5 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ApbA PF02558.16 gi|568164120|ref|YP_008947569.1| - 0.13 11.9 0.1 0.26 10.9 0.1 1.6 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA ACT_5 PF13710.6 gi|568164121|ref|YP_008947570.1| - 3.3e-06 26.8 0.0 5.2e-06 26.2 0.0 1.3 1 0 0 1 1 1 1 ACT domain TPP_enzyme_N PF02776.18 gi|568164122|ref|YP_008947571.1| - 8.6e-55 185.0 0.0 3.3e-53 179.8 0.0 2.4 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|568164122|ref|YP_008947571.1| - 1e-46 158.5 0.0 8.9e-45 152.2 0.0 2.6 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|568164122|ref|YP_008947571.1| - 5.2e-38 129.9 0.0 1.1e-37 128.8 0.0 1.6 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain POR_N PF01855.19 gi|568164122|ref|YP_008947571.1| - 0.00021 21.1 0.0 0.00043 20.1 0.0 1.5 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Acid_PPase PF12689.7 gi|568164123|ref|YP_008947572.1| - 8.8e-12 45.2 0.1 1.5e-11 44.5 0.1 1.4 1 1 0 1 1 1 1 Acid Phosphatase HAD_2 PF13419.6 gi|568164123|ref|YP_008947572.1| - 1.9e-08 34.6 0.1 1.9e-08 34.6 0.1 2.1 2 1 1 3 3 3 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|568164123|ref|YP_008947572.1| - 8.1e-06 26.3 0.0 0.0046 17.3 0.0 2.2 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase DUF2608 PF11019.8 gi|568164123|ref|YP_008947572.1| - 0.0023 17.5 0.3 0.077 12.5 0.1 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF2608) MMR_HSR1 PF01926.23 gi|568164124|ref|YP_008947573.1| - 5.6e-15 55.4 0.4 1.2e-11 44.7 0.0 2.2 2 0 0 2 2 2 2 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 gi|568164124|ref|YP_008947573.1| - 1e-11 45.1 0.0 1.6e-11 44.4 0.0 1.2 1 0 0 1 1 1 1 RsgA GTPase FeoB_N PF02421.18 gi|568164124|ref|YP_008947573.1| - 1.3e-08 34.6 0.2 0.00047 19.7 0.2 2.2 2 0 0 2 2 2 2 Ferrous iron transport protein B Dynamin_N PF00350.23 gi|568164124|ref|YP_008947573.1| - 6.1e-05 23.1 0.8 0.024 14.7 0.0 2.7 2 1 0 3 3 3 2 Dynamin family Roc PF08477.13 gi|568164124|ref|YP_008947573.1| - 0.00093 19.4 0.0 0.026 14.7 0.0 2.3 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase PduV-EutP PF10662.9 gi|568164124|ref|YP_008947573.1| - 0.019 14.7 0.1 0.42 10.4 0.0 2.1 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation 6PF2K PF01591.18 gi|568164124|ref|YP_008947573.1| - 0.021 14.1 1.2 17 4.6 0.0 3.3 2 1 0 3 3 3 0 6-phosphofructo-2-kinase MMR_HSR1_Xtn PF16897.5 gi|568164124|ref|YP_008947573.1| - 0.022 14.7 0.8 0.038 14.0 0.1 1.8 2 0 0 2 2 2 0 C-terminal region of MMR_HSR1 domain Arf PF00025.21 gi|568164124|ref|YP_008947573.1| - 0.036 13.5 0.2 0.57 9.6 0.0 2.2 1 1 1 2 2 2 0 ADP-ribosylation factor family GTP_EFTU PF00009.27 gi|568164124|ref|YP_008947573.1| - 0.054 13.0 0.1 0.44 10.1 0.0 2.3 2 1 0 2 2 2 0 Elongation factor Tu GTP binding domain AAA_18 PF13238.6 gi|568164124|ref|YP_008947573.1| - 0.066 13.8 0.1 0.32 11.5 0.0 2.1 2 1 0 2 2 2 0 AAA domain cobW PF02492.19 gi|568164124|ref|YP_008947573.1| - 0.23 11.0 0.4 0.58 9.7 0.0 1.7 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain CARDB PF07705.11 gi|568164125|ref|YP_008947574.1| - 0.013 15.7 0.3 0.31 11.3 0.1 2.4 2 0 0 2 2 2 0 CARDB PilZ PF07238.14 gi|568164125|ref|YP_008947574.1| - 0.1 12.9 0.1 0.36 11.2 0.0 2.0 2 0 0 2 2 2 0 PilZ domain Phlebovirus_NSM PF07246.11 gi|568164125|ref|YP_008947574.1| - 0.12 11.7 0.0 0.18 11.2 0.0 1.2 1 0 0 1 1 1 0 Phlebovirus nonstructural protein NS-M UbiA PF01040.18 gi|568164126|ref|YP_008947575.1| - 1.3e-43 149.1 12.4 1.6e-43 148.9 12.4 1.0 1 0 0 1 1 1 1 UbiA prenyltransferase family Pyr_redox_2 PF07992.14 gi|568164128|ref|YP_008947577.1| - 0.015 14.5 0.0 0.021 14.1 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|568164128|ref|YP_008947577.1| - 0.032 13.5 0.1 0.042 13.1 0.1 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase AdoMet_dc PF02675.15 gi|568164129|ref|YP_008947578.1| - 7.3e-33 113.0 0.1 8.1e-33 112.9 0.1 1.0 1 0 0 1 1 1 1 S-adenosylmethionine decarboxylase DUF211 PF02680.14 gi|568164130|ref|YP_008947579.1| - 3.6e-36 123.2 5.3 4e-36 123.0 5.3 1.0 1 0 0 1 1 1 1 Uncharacterized ArCR, COG1888 ATP_bind_3 PF01171.20 gi|568164131|ref|YP_008947580.1| - 4.5e-08 33.1 0.0 7e-08 32.4 0.0 1.3 1 0 0 1 1 1 1 PP-loop family NAD_synthase PF02540.17 gi|568164131|ref|YP_008947580.1| - 0.0074 15.4 0.0 0.0097 15.1 0.0 1.2 1 0 0 1 1 1 1 NAD synthase DUF2024 PF09630.10 gi|568164131|ref|YP_008947580.1| - 0.018 14.9 0.0 0.84 9.6 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF2024) Cob_adeno_trans PF01923.18 gi|568164132|ref|YP_008947581.1| - 1.6e-48 164.9 0.0 1.9e-48 164.7 0.0 1.0 1 0 0 1 1 1 1 Cobalamin adenosyltransferase Spectrin PF00435.21 gi|568164132|ref|YP_008947581.1| - 0.04 14.4 0.3 0.56 10.7 0.1 2.3 2 0 0 2 2 2 0 Spectrin repeat tRNA-synt_1 PF00133.22 gi|568164133|ref|YP_008947582.1| - 1.6e-54 185.3 0.0 1.7e-53 181.9 0.0 2.3 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|568164133|ref|YP_008947582.1| - 5.2e-20 71.9 0.5 1.1e-19 70.8 0.5 1.6 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|568164133|ref|YP_008947582.1| - 9.6e-17 60.8 0.2 3.9e-10 39.0 0.0 3.1 2 1 1 3 3 3 2 tRNA synthetases class I (M) tRNA-synt_1_2 PF13603.6 gi|568164133|ref|YP_008947582.1| - 1.4e-12 47.5 0.1 3e-12 46.4 0.1 1.5 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1e PF01406.19 gi|568164133|ref|YP_008947582.1| - 2.2e-10 40.4 0.1 2e-08 33.9 0.0 2.6 2 1 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 gi|568164133|ref|YP_008947582.1| - 0.013 14.4 0.0 0.034 13.1 0.0 1.7 1 0 0 1 1 1 0 tRNA synthetases class I (K) DUF4116 PF13475.6 gi|568164133|ref|YP_008947582.1| - 0.05 13.3 0.0 0.27 11.0 0.0 2.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4116) SBDS_C PF09377.10 gi|568164133|ref|YP_008947582.1| - 0.14 12.2 0.2 2.2 8.3 0.0 3.0 4 0 0 4 4 4 0 SBDS protein C-terminal domain HrcA_DNA-bdg PF03444.15 gi|568164886|ref|YP_008947583.1| - 0.03 14.0 1.5 0.045 13.4 0.4 1.9 2 0 0 2 2 2 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Penicillinase_R PF03965.16 gi|568164886|ref|YP_008947583.1| - 0.032 14.6 0.1 0.064 13.6 0.1 1.5 1 0 0 1 1 1 0 Penicillinase repressor Phage_min_cap2 PF06152.11 gi|568164886|ref|YP_008947583.1| - 0.042 12.8 0.4 0.042 12.8 0.4 1.8 2 0 0 2 2 2 0 Phage minor capsid protein 2 Aminotran_1_2 PF00155.21 gi|568164134|ref|YP_008947584.1| - 1.5e-40 139.5 0.0 1.7e-40 139.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Tax PF02959.16 gi|568164134|ref|YP_008947584.1| - 0.16 11.4 0.1 0.26 10.7 0.1 1.3 1 0 0 1 1 1 0 HTLV Tax HisG PF01634.18 gi|568164135|ref|YP_008947585.1| - 6.9e-48 162.6 0.1 1e-47 162.0 0.1 1.3 1 0 0 1 1 1 1 ATP phosphoribosyltransferase HisG_C PF08029.11 gi|568164135|ref|YP_008947585.1| - 1.6e-18 66.6 2.3 3.3e-18 65.6 0.3 2.4 3 0 0 3 3 3 1 HisG, C-terminal domain His_biosynth PF00977.21 gi|568164136|ref|YP_008947586.1| - 1.1e-40 139.5 1.6 1.3e-40 139.3 1.6 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein PcrB PF01884.17 gi|568164136|ref|YP_008947586.1| - 0.00059 19.4 0.8 0.015 14.7 0.1 2.2 2 0 0 2 2 2 2 PcrB family IGPD PF00475.18 gi|568164137|ref|YP_008947587.1| - 1.7e-49 167.9 0.2 2.4e-49 167.3 0.2 1.2 1 0 0 1 1 1 1 Imidazoleglycerol-phosphate dehydratase His_biosynth PF00977.21 gi|568164138|ref|YP_008947588.1| - 1.3e-82 276.7 5.8 1.5e-82 276.5 5.8 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein NMO PF03060.15 gi|568164138|ref|YP_008947588.1| - 1.2e-06 28.2 2.2 0.0049 16.3 0.1 2.2 2 0 0 2 2 2 2 Nitronate monooxygenase ThiG PF05690.14 gi|568164138|ref|YP_008947588.1| - 8.6e-05 22.0 1.6 0.00064 19.1 0.2 2.1 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG TMP-TENI PF02581.17 gi|568164138|ref|YP_008947588.1| - 0.00027 20.3 0.6 0.18 11.1 0.1 2.2 2 0 0 2 2 2 2 Thiamine monophosphate synthase G3P_antiterm PF04309.12 gi|568164138|ref|YP_008947588.1| - 0.00072 19.0 1.0 0.0091 15.4 0.2 2.2 2 0 0 2 2 2 1 Glycerol-3-phosphate responsive antiterminator Dus PF01207.17 gi|568164138|ref|YP_008947588.1| - 0.00089 18.4 0.4 0.17 10.9 0.1 2.1 1 1 1 2 2 2 2 Dihydrouridine synthase (Dus) DHO_dh PF01180.21 gi|568164138|ref|YP_008947588.1| - 0.07 12.3 2.1 0.92 8.7 0.1 2.2 2 0 0 2 2 2 0 Dihydroorotate dehydrogenase Histidinol_dh PF00815.20 gi|568164139|ref|YP_008947589.1| - 6.7e-125 417.3 0.2 4.6e-124 414.6 0.2 1.8 1 1 0 1 1 1 1 Histidinol dehydrogenase Cse1 PF08506.10 gi|568164139|ref|YP_008947589.1| - 0.094 11.5 0.1 0.16 10.7 0.1 1.3 1 0 0 1 1 1 0 Cse1 PRA-PH PF01503.17 gi|568164140|ref|YP_008947590.1| - 1.5e-13 50.9 0.2 1.7e-13 50.8 0.2 1.1 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase Chordopox_L2 PF05803.12 gi|568164140|ref|YP_008947590.1| - 0.084 12.7 0.1 0.22 11.4 0.1 1.8 1 1 0 1 1 1 0 Chordopoxvirus L2 protein GATase PF00117.28 gi|568164141|ref|YP_008947591.1| - 1.7e-19 70.4 0.0 2.1e-19 70.0 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.14 gi|568164141|ref|YP_008947591.1| - 0.09 12.4 0.0 0.14 11.7 0.0 1.3 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain PRA-CH PF01502.18 gi|568164142|ref|YP_008947592.1| - 1.6e-30 104.8 0.1 2.5e-30 104.1 0.1 1.3 1 0 0 1 1 1 1 Phosphoribosyl-AMP cyclohydrolase LpxI_N PF17930.1 gi|568164142|ref|YP_008947592.1| - 0.07 13.0 0.0 0.079 12.9 0.0 1.2 1 0 0 1 1 1 0 LpxI N-terminal domain FeS_assembly_P PF01883.19 gi|568164143|ref|YP_008947593.1| - 9.3e-20 70.6 0.5 1.2e-19 70.2 0.5 1.2 1 0 0 1 1 1 1 Iron-sulfur cluster assembly protein YqhG PF11079.8 gi|568164143|ref|YP_008947593.1| - 0.061 12.3 0.0 0.13 11.2 0.0 1.5 2 0 0 2 2 2 0 Bacterial protein YqhG of unknown function NifU PF01106.17 gi|568164143|ref|YP_008947593.1| - 0.072 13.3 0.0 0.1 12.8 0.0 1.3 1 0 0 1 1 1 0 NifU-like domain HTH_34 PF13601.6 gi|568164143|ref|YP_008947593.1| - 0.17 12.1 0.0 0.31 11.2 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain tRNA-synt_2b PF00587.25 gi|568164144|ref|YP_008947594.1| - 2.9e-39 134.9 0.0 1.7e-38 132.4 0.0 1.9 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.22 gi|568164144|ref|YP_008947594.1| - 6e-25 87.6 12.1 1.2e-24 86.6 12.1 1.5 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain ALIX_LYPXL_bnd PF13949.6 gi|568164144|ref|YP_008947594.1| - 0.0053 16.1 1.2 0.0092 15.3 1.2 1.3 1 0 0 1 1 1 1 ALIX V-shaped domain binding to HIV APG6_N PF17675.1 gi|568164144|ref|YP_008947594.1| - 0.27 11.8 9.1 1.7 9.2 9.7 2.0 2 0 0 2 2 2 0 Apg6 coiled-coil region FapA PF03961.13 gi|568164144|ref|YP_008947594.1| - 1 7.9 6.3 1.9 7.0 6.3 1.4 1 0 0 1 1 1 0 Flagellar Assembly Protein A Radical_SAM PF04055.21 gi|568164145|ref|YP_008947595.1| - 1.8e-16 61.0 0.0 8.9e-16 58.7 0.0 2.0 2 0 0 2 2 2 1 Radical SAM superfamily B12-binding PF02310.19 gi|568164145|ref|YP_008947595.1| - 0.12 12.4 0.0 3.5 7.7 0.0 2.2 2 0 0 2 2 2 0 B12 binding domain RNA_POL_M_15KD PF02150.16 gi|568164147|ref|YP_008947597.1| - 1.3e-08 34.6 2.2 2.2e-08 33.8 2.2 1.4 1 0 0 1 1 1 1 RNA polymerases M/15 Kd subunit DUF2387 PF09526.10 gi|568164147|ref|YP_008947597.1| - 0.0069 16.5 0.3 0.012 15.7 0.3 1.5 1 0 0 1 1 1 1 Probable metal-binding protein (DUF2387) zf-TFIIB PF13453.6 gi|568164147|ref|YP_008947597.1| - 0.0082 15.5 1.5 0.016 14.5 1.5 1.5 1 0 0 1 1 1 1 Transcription factor zinc-finger IBR PF01485.21 gi|568164147|ref|YP_008947597.1| - 0.012 15.8 1.2 0.024 14.9 1.2 1.5 1 0 0 1 1 1 0 IBR domain, a half RING-finger domain Cys_rich_CPCC PF14206.6 gi|568164147|ref|YP_008947597.1| - 0.016 15.0 0.2 0.027 14.3 0.2 1.4 1 0 0 1 1 1 0 Cysteine-rich CPCC zf-NADH-PPase PF09297.11 gi|568164147|ref|YP_008947597.1| - 0.03 14.0 3.4 0.092 12.4 3.4 1.8 1 1 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain Nudix_N_2 PF14803.6 gi|568164147|ref|YP_008947597.1| - 0.034 14.1 2.2 0.07 13.1 2.2 1.5 1 1 0 1 1 1 0 Nudix N-terminal zf-IS66 PF13005.7 gi|568164147|ref|YP_008947597.1| - 0.069 13.6 1.9 0.069 13.6 1.9 2.2 2 1 0 2 2 2 0 zinc-finger binding domain of transposase IS66 OrfB_Zn_ribbon PF07282.11 gi|568164147|ref|YP_008947597.1| - 0.08 12.9 0.8 0.15 12.0 0.8 1.4 1 0 0 1 1 1 0 Putative transposase DNA-binding domain C1_1 PF00130.22 gi|568164147|ref|YP_008947597.1| - 0.14 12.1 1.3 0.21 11.5 1.3 1.3 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-C4_Topoisom PF01396.19 gi|568164147|ref|YP_008947597.1| - 0.18 11.6 4.1 0.32 10.8 3.6 1.7 1 1 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger Ribosomal_L33 PF00471.20 gi|568164147|ref|YP_008947597.1| - 0.27 11.7 6.8 0.34 11.4 3.2 2.2 2 0 0 2 2 2 0 Ribosomal protein L33 NOB1_Zn_bind PF08772.11 gi|568164147|ref|YP_008947597.1| - 0.31 11.2 5.4 4.1 7.6 0.2 2.3 2 1 0 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like zf-ribbon_3 PF13248.6 gi|568164147|ref|YP_008947597.1| - 0.42 10.1 0.3 0.42 10.1 0.3 2.1 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|568164147|ref|YP_008947597.1| - 0.7 9.7 5.6 0.94 9.3 1.3 2.3 2 0 0 2 2 2 0 zinc-ribbon domain DUF1936 PF09151.10 gi|568164147|ref|YP_008947597.1| - 4.3 7.3 6.9 63 3.6 0.0 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF1936) AsnC_trans_reg PF01037.21 gi|568164148|ref|YP_008947598.1| - 3.9e-19 68.4 0.3 5.8e-19 67.8 0.3 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 gi|568164148|ref|YP_008947598.1| - 1.5e-13 50.0 3.1 8.7e-13 47.6 0.6 2.4 3 0 0 3 3 2 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|568164148|ref|YP_008947598.1| - 9.9e-11 41.3 0.9 4.4e-10 39.2 1.5 1.7 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.12 gi|568164148|ref|YP_008947598.1| - 3.7e-06 26.8 0.0 6.7e-06 26.0 0.0 1.5 1 0 0 1 1 1 1 HTH domain GntR PF00392.21 gi|568164148|ref|YP_008947598.1| - 0.0008 19.0 0.1 0.0012 18.5 0.1 1.2 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family Fe_dep_repress PF01325.19 gi|568164148|ref|YP_008947598.1| - 0.0015 18.7 0.1 0.0029 17.8 0.1 1.4 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain MarR_2 PF12802.7 gi|568164148|ref|YP_008947598.1| - 0.0017 18.2 0.1 0.0029 17.5 0.1 1.3 1 0 0 1 1 1 1 MarR family HTH_10 PF04967.12 gi|568164148|ref|YP_008947598.1| - 0.0021 17.8 0.0 0.0037 17.0 0.0 1.4 1 0 0 1 1 1 1 HTH DNA binding domain TrmB PF01978.19 gi|568164148|ref|YP_008947598.1| - 0.0042 16.9 0.1 0.0083 16.0 0.1 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_50 PF18024.1 gi|568164148|ref|YP_008947598.1| - 0.0053 16.3 0.1 0.022 14.3 0.1 2.0 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_8 PF02954.19 gi|568164148|ref|YP_008947598.1| - 0.0059 16.4 0.3 0.01 15.6 0.3 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family MarR PF01047.22 gi|568164148|ref|YP_008947598.1| - 0.0064 16.4 0.1 0.013 15.4 0.1 1.5 1 0 0 1 1 1 1 MarR family HTH_23 PF13384.6 gi|568164148|ref|YP_008947598.1| - 0.0072 16.1 0.0 0.012 15.3 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_DeoR PF08220.12 gi|568164148|ref|YP_008947598.1| - 0.0078 15.9 0.1 0.02 14.6 0.1 1.7 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain Rrf2 PF02082.20 gi|568164148|ref|YP_008947598.1| - 0.0099 16.2 0.1 0.02 15.3 0.1 1.5 1 0 0 1 1 1 1 Transcriptional regulator HTH_Tnp_ISL3 PF13542.6 gi|568164148|ref|YP_008947598.1| - 0.012 15.0 0.0 0.017 14.5 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 PCI PF01399.27 gi|568164148|ref|YP_008947598.1| - 0.012 16.1 0.2 0.037 14.5 0.1 1.8 2 0 0 2 2 2 0 PCI domain HTH_Mga PF08280.11 gi|568164148|ref|YP_008947598.1| - 0.015 15.3 0.1 0.03 14.3 0.1 1.5 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain HTH_IclR PF09339.10 gi|568164148|ref|YP_008947598.1| - 0.016 15.0 0.1 0.024 14.4 0.1 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_38 PF13936.6 gi|568164148|ref|YP_008947598.1| - 0.017 14.9 0.1 0.034 13.9 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_28 PF13518.6 gi|568164148|ref|YP_008947598.1| - 0.035 14.2 0.0 0.059 13.5 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_29 PF13551.6 gi|568164148|ref|YP_008947598.1| - 0.045 13.8 0.0 0.071 13.1 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn helix HTH_30 PF13556.6 gi|568164148|ref|YP_008947598.1| - 0.046 13.5 0.1 0.076 12.8 0.1 1.3 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|568164148|ref|YP_008947598.1| - 0.063 13.3 0.1 0.099 12.6 0.1 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Mga PF05043.13 gi|568164148|ref|YP_008947598.1| - 0.065 13.8 0.0 0.13 12.8 0.0 1.5 1 0 0 1 1 1 0 Mga helix-turn-helix domain LexA_DNA_bind PF01726.16 gi|568164148|ref|YP_008947598.1| - 0.083 12.7 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 LexA DNA binding domain HTH_7 PF02796.15 gi|568164148|ref|YP_008947598.1| - 0.11 12.5 0.0 0.38 10.9 0.0 1.9 1 1 1 2 2 2 0 Helix-turn-helix domain of resolvase HTH_9 PF08221.11 gi|568164148|ref|YP_008947598.1| - 0.13 12.3 0.2 0.29 11.2 0.1 1.6 2 0 0 2 2 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain MarC PF01914.17 gi|568164149|ref|YP_008947599.1| - 1.7e-30 105.9 14.2 2.2e-30 105.6 14.2 1.1 1 0 0 1 1 1 1 MarC family integral membrane protein Phage_holin_3_1 PF05106.12 gi|568164149|ref|YP_008947599.1| - 0.22 12.0 0.2 0.22 12.0 0.2 1.9 2 0 0 2 2 2 0 Phage holin family (Lysis protein S) DUF4233 PF14017.6 gi|568164149|ref|YP_008947599.1| - 1 9.7 9.6 0.098 13.0 1.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4233) Spc7 PF08317.11 gi|568164150|ref|YP_008947600.1| - 0.00016 20.7 3.2 0.00017 20.6 3.2 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein Cast PF10174.9 gi|568164150|ref|YP_008947600.1| - 0.00063 18.1 5.3 0.00072 17.9 5.3 1.1 1 0 0 1 1 1 1 RIM-binding protein of the cytomatrix active zone MIP-T3_C PF17749.1 gi|568164150|ref|YP_008947600.1| - 0.0068 16.4 2.4 0.0098 15.9 2.4 1.3 1 0 0 1 1 1 1 Microtubule-binding protein MIP-T3 C-terminal region Occludin_ELL PF07303.13 gi|568164150|ref|YP_008947600.1| - 0.017 15.8 2.6 0.028 15.2 1.4 1.7 1 1 1 2 2 2 0 Occludin homology domain YfiO PF13525.6 gi|568164150|ref|YP_008947600.1| - 0.047 13.4 0.0 0.049 13.4 0.0 1.1 1 0 0 1 1 1 0 Outer membrane lipoprotein PP_M1 PF03012.14 gi|568164150|ref|YP_008947600.1| - 0.086 12.4 2.0 0.1 12.1 2.0 1.1 1 0 0 1 1 1 0 Phosphoprotein DHO_dh PF01180.21 gi|568164152|ref|YP_008947602.1| - 1e-46 159.5 0.5 1.3e-46 159.2 0.5 1.1 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase Amidohydro_1 PF01979.20 gi|568164153|ref|YP_008947603.1| - 2.6e-15 56.6 0.0 1.5e-08 34.4 0.0 2.1 1 1 1 2 2 2 2 Amidohydrolase family Amidohydro_3 PF07969.11 gi|568164153|ref|YP_008947603.1| - 7.2e-05 22.4 0.0 0.00095 18.7 0.0 2.0 2 0 0 2 2 2 1 Amidohydrolase family DHODB_Fe-S_bind PF10418.9 gi|568164154|ref|YP_008947604.1| - 0.0057 16.4 4.9 0.012 15.5 4.9 1.5 1 0 0 1 1 1 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B PyrI PF01948.18 gi|568164155|ref|YP_008947605.1| - 1.1e-32 112.1 5.5 1.5e-32 111.7 4.9 1.5 2 0 0 2 2 2 1 Aspartate carbamoyltransferase regulatory chain, allosteric domain PyrI_C PF02748.15 gi|568164155|ref|YP_008947605.1| - 1e-15 57.3 2.2 1.9e-15 56.4 2.2 1.5 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, metal binding domain OTCace_N PF02729.21 gi|568164156|ref|YP_008947606.1| - 1.8e-41 141.6 0.0 3.5e-41 140.7 0.0 1.5 2 0 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.24 gi|568164156|ref|YP_008947606.1| - 8.6e-25 87.6 0.0 1.4e-24 86.9 0.0 1.4 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Pribosyltran PF00156.27 gi|568164157|ref|YP_008947607.1| - 2.9e-22 78.9 0.8 4.2e-22 78.4 0.8 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|568164157|ref|YP_008947607.1| - 0.00032 20.2 0.0 0.00046 19.7 0.0 1.2 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|568164157|ref|YP_008947607.1| - 0.031 13.8 0.0 0.043 13.3 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosyl transferase OMPdecase PF00215.24 gi|568164158|ref|YP_008947608.1| - 2.9e-20 72.9 0.0 3.5e-20 72.6 0.0 1.1 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family JmjN PF02375.17 gi|568164158|ref|YP_008947608.1| - 0.12 12.4 0.2 23 5.1 0.0 3.2 4 0 0 4 4 4 0 jmjN domain Prok-JAB PF14464.6 gi|568164159|ref|YP_008947609.1| - 0.11 12.2 0.1 0.28 11.0 0.1 1.6 1 1 0 1 1 1 0 Prokaryotic homologs of the JAB domain PhoU PF01895.19 gi|568164160|ref|YP_008947610.1| - 2.4e-19 69.6 6.7 2.2e-16 60.1 0.4 2.7 3 0 0 3 3 3 2 PhoU domain MazE_antitoxin PF04014.18 gi|568164160|ref|YP_008947610.1| - 5.6e-11 42.1 0.2 1.9e-10 40.4 0.0 2.0 2 0 0 2 2 2 1 Antidote-toxin recognition MazE, bacterial antitoxin DUF192 PF02643.15 gi|568164160|ref|YP_008947610.1| - 0.012 15.8 0.0 0.055 13.6 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized ACR, COG1430 DUF600 PF04634.12 gi|568164160|ref|YP_008947610.1| - 0.083 12.9 0.4 0.16 12.1 0.4 1.5 1 0 0 1 1 1 0 Protein of unknown function, DUF600 DUF2106 PF09879.9 gi|568164887|ref|YP_008947611.1| - 0.0023 17.5 0.1 0.004 16.7 0.1 1.4 1 0 0 1 1 1 1 Predicted membrane protein (DUF2106) TYW3 PF02676.14 gi|568164162|ref|YP_008947614.1| - 6.3e-31 107.4 0.0 1.1e-30 106.6 0.0 1.3 1 1 0 1 1 1 1 Methyltransferase TYW3 Fer4_14 PF13394.6 gi|568164163|ref|YP_008947615.1| - 2.7e-14 53.3 0.0 4.4e-14 52.6 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Radical_SAM PF04055.21 gi|568164163|ref|YP_008947615.1| - 5.9e-13 49.5 0.0 1.1e-12 48.7 0.0 1.6 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|568164163|ref|YP_008947615.1| - 1.5e-09 38.2 0.0 2.1e-09 37.8 0.0 1.2 1 0 0 1 1 1 1 4Fe-4S single cluster domain SIR2 PF02146.17 gi|568164163|ref|YP_008947615.1| - 0.05 13.5 0.0 0.078 12.9 0.0 1.2 1 0 0 1 1 1 0 Sir2 family NOG1_N PF17835.1 gi|568164164|ref|YP_008947616.1| - 1.3e-31 109.7 1.8 1.3e-31 109.7 1.8 1.6 2 0 0 2 2 2 1 NOG1 N-terminal helical domain MMR_HSR1 PF01926.23 gi|568164164|ref|YP_008947616.1| - 3.1e-18 65.9 0.1 8.1e-18 64.6 0.1 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase NOG1 PF06858.14 gi|568164164|ref|YP_008947616.1| - 7.6e-17 60.8 0.5 4e-16 58.5 0.1 2.2 2 0 0 2 2 2 1 Nucleolar GTP-binding protein 1 (NOG1) FeoB_N PF02421.18 gi|568164164|ref|YP_008947616.1| - 1.7e-14 53.6 0.4 2.5e-14 53.1 0.4 1.2 1 0 0 1 1 1 1 Ferrous iron transport protein B Dynamin_N PF00350.23 gi|568164164|ref|YP_008947616.1| - 2.3e-06 27.7 1.7 6.6e-05 23.0 0.2 2.5 1 1 1 2 2 2 1 Dynamin family PduV-EutP PF10662.9 gi|568164164|ref|YP_008947616.1| - 6.8e-06 25.9 0.2 2e-05 24.3 0.2 1.8 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation RsgA_GTPase PF03193.16 gi|568164164|ref|YP_008947616.1| - 6.4e-05 22.9 2.3 0.035 14.0 0.2 2.6 2 1 0 2 2 2 2 RsgA GTPase GTP_EFTU PF00009.27 gi|568164164|ref|YP_008947616.1| - 7.3e-05 22.4 0.1 0.01 15.4 0.4 3.0 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain MMR_HSR1_Xtn PF16897.5 gi|568164164|ref|YP_008947616.1| - 0.00045 20.2 1.9 0.0028 17.7 0.5 2.3 2 0 0 2 2 2 1 C-terminal region of MMR_HSR1 domain AIG1 PF04548.16 gi|568164164|ref|YP_008947616.1| - 0.0032 16.8 0.1 0.0056 16.0 0.1 1.5 1 0 0 1 1 1 1 AIG1 family DnaB_C PF03796.15 gi|568164164|ref|YP_008947616.1| - 0.0085 15.5 0.1 0.06 12.7 0.1 2.1 2 0 0 2 2 2 1 DnaB-like helicase C terminal domain AAA_18 PF13238.6 gi|568164164|ref|YP_008947616.1| - 0.019 15.5 0.0 0.047 14.2 0.0 1.9 1 1 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 gi|568164164|ref|YP_008947616.1| - 0.028 14.2 0.1 6.4 6.5 0.0 2.3 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein NTPase_1 PF03266.15 gi|568164164|ref|YP_008947616.1| - 0.033 14.1 0.3 0.39 10.6 0.0 2.5 2 0 0 2 2 2 0 NTPase AAA_16 PF13191.6 gi|568164164|ref|YP_008947616.1| - 0.035 14.5 0.0 0.14 12.5 0.0 2.1 3 0 0 3 3 3 0 AAA ATPase domain BRAP2 PF07576.12 gi|568164164|ref|YP_008947616.1| - 0.038 14.2 0.0 0.086 13.1 0.0 1.6 1 0 0 1 1 1 0 BRCA1-associated protein 2 Ras PF00071.22 gi|568164164|ref|YP_008947616.1| - 0.042 13.4 0.1 0.14 11.7 0.1 1.8 1 1 0 1 1 1 0 Ras family RecG_N PF17190.4 gi|568164164|ref|YP_008947616.1| - 1.2 9.9 8.6 5.1 7.9 0.1 3.9 3 1 1 4 4 4 0 RecG N-terminal helical domain tRNA_bind PF01588.20 gi|568164165|ref|YP_008947617.1| - 2.4e-29 101.3 0.2 2.8e-29 101.1 0.2 1.0 1 0 0 1 1 1 1 Putative tRNA binding domain SAICAR_synt PF01259.18 gi|568164166|ref|YP_008947618.1| - 1.8e-55 188.3 0.6 2.2e-55 188.0 0.6 1.0 1 0 0 1 1 1 1 SAICAR synthetase PurS PF02700.14 gi|568164167|ref|YP_008947619.1| - 1.2e-19 70.3 0.4 1.3e-19 70.1 0.4 1.0 1 0 0 1 1 1 1 Phosphoribosylformylglycinamidine (FGAM) synthase Peptidase_S24 PF00717.23 gi|568164167|ref|YP_008947619.1| - 0.014 15.4 0.1 0.027 14.4 0.1 1.5 1 1 0 1 1 1 0 Peptidase S24-like GATase_5 PF13507.6 gi|568164168|ref|YP_008947620.1| - 6.9e-43 146.6 0.0 8.4e-43 146.3 0.0 1.1 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain DJ-1_PfpI PF01965.24 gi|568164168|ref|YP_008947620.1| - 1.8e-09 37.6 0.0 2.8e-09 37.0 0.0 1.2 1 0 0 1 1 1 1 DJ-1/PfpI family GATase_3 PF07685.14 gi|568164168|ref|YP_008947620.1| - 1.4e-08 34.6 0.1 3.1e-08 33.5 0.0 1.6 2 0 0 2 2 2 1 CobB/CobQ-like glutamine amidotransferase domain GATase PF00117.28 gi|568164168|ref|YP_008947620.1| - 2e-06 27.7 0.0 3.5e-06 26.9 0.0 1.5 1 1 0 1 1 1 1 Glutamine amidotransferase class-I AIRS_C PF02769.22 gi|568164169|ref|YP_008947621.1| - 7.1e-39 133.4 0.3 8.8e-28 97.4 0.4 2.2 2 0 0 2 2 2 2 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|568164169|ref|YP_008947621.1| - 2.1e-38 130.8 0.2 2e-18 66.8 0.1 2.4 2 0 0 2 2 2 2 AIR synthase related protein, N-terminal domain FGAR-AT_linker PF18072.1 gi|568164169|ref|YP_008947621.1| - 3.4e-09 37.1 0.3 6.9e-09 36.1 0.3 1.6 1 0 0 1 1 1 1 Formylglycinamide ribonucleotide amidotransferase linker domain DUF4258 PF14076.6 gi|568164169|ref|YP_008947621.1| - 0.1 13.0 0.0 0.53 10.7 0.0 2.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4258) GATase_7 PF13537.6 gi|568164170|ref|YP_008947622.1| - 1.6e-10 40.9 0.0 1.3e-09 38.0 0.0 2.1 1 1 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 gi|568164170|ref|YP_008947622.1| - 2.4e-10 40.7 0.0 5.6e-10 39.5 0.0 1.6 1 0 0 1 1 1 1 Glutamine amidotransferase domain Pribosyltran PF00156.27 gi|568164170|ref|YP_008947622.1| - 1.4e-09 37.7 0.5 2.8e-09 36.7 0.5 1.4 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_2 PF15609.6 gi|568164170|ref|YP_008947622.1| - 0.065 12.7 0.1 0.12 11.9 0.1 1.3 1 0 0 1 1 1 0 Phosphoribosyl transferase Pribosyltran PF00156.27 gi|568164171|ref|YP_008947623.1| - 6.2e-08 32.3 0.3 2.7e-07 30.2 0.3 1.9 1 1 0 1 1 1 1 Phosphoribosyl transferase domain GATase_7 PF13537.6 gi|568164171|ref|YP_008947623.1| - 0.0041 17.0 0.0 0.01 15.7 0.0 1.6 2 0 0 2 2 2 1 Glutamine amidotransferase domain PRTase_2 PF15609.6 gi|568164171|ref|YP_008947623.1| - 0.024 14.1 0.0 0.051 13.1 0.0 1.4 2 0 0 2 2 2 0 Phosphoribosyl transferase GARS_A PF01071.19 gi|568164172|ref|YP_008947624.1| - 1.7e-38 132.4 0.0 3.1e-38 131.5 0.0 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_N PF02844.15 gi|568164172|ref|YP_008947624.1| - 8.2e-20 71.4 0.1 1.7e-19 70.4 0.1 1.6 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, N domain GARS_C PF02843.16 gi|568164172|ref|YP_008947624.1| - 3.4e-06 27.2 0.0 9.4e-06 25.8 0.0 1.8 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, C domain CPSase_L_D2 PF02786.17 gi|568164172|ref|YP_008947624.1| - 0.00011 21.8 0.0 0.00026 20.6 0.0 1.6 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATPgrasp_ST PF14397.6 gi|568164172|ref|YP_008947624.1| - 0.00033 20.0 0.0 0.00084 18.7 0.0 1.6 2 0 0 2 2 2 1 Sugar-transfer associated ATP-grasp ATP-grasp_4 PF13535.6 gi|568164172|ref|YP_008947624.1| - 0.00049 19.7 0.0 0.003 17.2 0.0 2.1 2 0 0 2 2 2 1 ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|568164172|ref|YP_008947624.1| - 0.14 11.7 0.2 0.42 10.1 0.2 1.8 1 1 0 1 1 1 0 D-ala D-ala ligase C-terminus AIRS_C PF02769.22 gi|568164173|ref|YP_008947625.1| - 2e-26 93.0 0.0 3.1e-26 92.4 0.0 1.3 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|568164173|ref|YP_008947625.1| - 3e-17 63.0 1.6 5.2e-17 62.3 1.6 1.4 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain OrsD PF12013.8 gi|568164174|ref|YP_008947626.1| - 0.0038 17.7 0.1 0.0061 17.0 0.1 1.3 1 0 0 1 1 1 1 Orsellinic acid/F9775 biosynthesis cluster protein D TCTP PF00838.17 gi|568164174|ref|YP_008947626.1| - 0.018 15.4 1.6 0.35 11.2 0.9 2.0 1 1 1 2 2 2 0 Translationally controlled tumour protein zf_UBZ PF18439.1 gi|568164174|ref|YP_008947626.1| - 0.048 13.3 0.2 0.081 12.5 0.2 1.4 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger PapB PF03333.13 gi|568164174|ref|YP_008947626.1| - 0.072 13.1 0.0 0.16 12.0 0.0 1.6 1 0 0 1 1 1 0 Adhesin biosynthesis transcription regulatory protein DUF4120 PF13496.6 gi|568164174|ref|YP_008947626.1| - 0.1 13.0 0.1 0.21 11.9 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4120) RHH_1 PF01402.21 gi|568164175|ref|YP_008947627.1| - 0.00042 20.1 0.0 0.00052 19.9 0.0 1.1 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family HicB_lk_antitox PF15919.5 gi|568164175|ref|YP_008947627.1| - 0.026 14.6 0.0 0.034 14.3 0.0 1.2 1 1 0 1 1 1 0 HicB_like antitoxin of bacterial toxin-antitoxin system Arginosuc_synth PF00764.19 gi|568164176|ref|YP_008947628.1| - 4.8e-140 467.2 0.0 5.6e-140 467.0 0.0 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase QueC PF06508.13 gi|568164176|ref|YP_008947628.1| - 0.00023 20.7 0.2 0.00048 19.7 0.2 1.7 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC PAPS_reduct PF01507.19 gi|568164176|ref|YP_008947628.1| - 0.029 14.4 0.0 0.083 12.9 0.0 1.8 1 1 0 1 1 1 0 Phosphoadenosine phosphosulfate reductase family Phage_30_8 PF06019.11 gi|568164176|ref|YP_008947628.1| - 0.067 13.1 0.2 0.58 10.1 0.1 2.3 2 0 0 2 2 2 0 Phage GP30.8 protein Lyase_1 PF00206.20 gi|568164177|ref|YP_008947629.1| - 3.6e-40 138.3 0.0 6.6e-40 137.4 0.0 1.4 1 0 0 1 1 1 1 Lyase ASL_C2 PF14698.6 gi|568164177|ref|YP_008947629.1| - 0.0022 18.7 0.0 0.0073 17.0 0.0 1.9 1 0 0 1 1 1 1 Argininosuccinate lyase C-terminal CPSase_sm_chain PF00988.22 gi|568164178|ref|YP_008947630.1| - 1.9e-46 157.1 0.0 2.9e-46 156.4 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase small chain, CPSase domain GATase PF00117.28 gi|568164178|ref|YP_008947630.1| - 1.7e-39 135.6 0.0 2.6e-39 135.0 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|568164178|ref|YP_008947630.1| - 2.5e-06 27.4 1.0 0.001 18.9 0.1 2.3 1 1 1 2 2 2 2 Peptidase C26 CPSase_L_D2 PF02786.17 gi|568164179|ref|YP_008947631.1| - 1.3e-97 325.4 0.0 7e-66 221.7 0.0 2.3 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_D3 PF02787.19 gi|568164179|ref|YP_008947631.1| - 2.4e-34 118.3 0.2 8.8e-34 116.5 0.2 2.0 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ATP-grasp PF02222.22 gi|568164179|ref|YP_008947631.1| - 3.5e-20 72.3 0.0 2.1e-09 37.2 0.0 2.3 2 0 0 2 2 2 2 ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|568164179|ref|YP_008947631.1| - 3.2e-14 52.9 0.1 3e-07 30.2 0.1 2.6 2 0 0 2 2 2 2 D-ala D-ala ligase C-terminus ATPgrasp_Ter PF15632.6 gi|568164179|ref|YP_008947631.1| - 7e-13 48.5 0.0 2.3e-06 27.4 0.0 2.6 2 0 0 2 2 2 2 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_3 PF02655.14 gi|568164179|ref|YP_008947631.1| - 1.4e-08 35.0 0.3 0.00042 20.4 0.1 3.2 2 1 0 2 2 2 2 ATP-grasp domain ATP-grasp_5 PF13549.6 gi|568164179|ref|YP_008947631.1| - 3e-06 26.9 0.1 0.008 15.7 0.0 3.1 2 1 0 2 2 2 2 ATP-grasp domain RimK PF08443.11 gi|568164179|ref|YP_008947631.1| - 0.0001 22.0 0.0 0.0048 16.5 0.0 2.9 3 0 0 3 3 3 1 RimK-like ATP-grasp domain GARS_A PF01071.19 gi|568164179|ref|YP_008947631.1| - 0.00013 21.8 0.1 0.0066 16.2 0.1 2.8 2 1 0 2 2 2 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_2 PF08442.10 gi|568164179|ref|YP_008947631.1| - 0.0051 16.4 0.0 0.26 10.8 0.0 3.4 3 1 1 4 4 4 1 ATP-grasp domain RimK PF08443.11 gi|568164180|ref|YP_008947632.1| - 4.8e-26 91.5 0.0 7.9e-26 90.8 0.0 1.3 1 0 0 1 1 1 1 RimK-like ATP-grasp domain GSH-S_ATP PF02955.16 gi|568164180|ref|YP_008947632.1| - 1.9e-07 30.6 0.0 3.3e-07 29.9 0.0 1.3 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATP-grasp_3 PF02655.14 gi|568164180|ref|YP_008947632.1| - 1.1e-06 28.7 0.0 1.8e-06 28.1 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_ST PF14397.6 gi|568164180|ref|YP_008947632.1| - 0.025 13.8 0.0 0.14 11.3 0.0 2.0 2 0 0 2 2 2 0 Sugar-transfer associated ATP-grasp Dala_Dala_lig_C PF07478.13 gi|568164180|ref|YP_008947632.1| - 0.09 12.3 0.0 0.25 10.8 0.0 1.8 1 1 0 1 1 1 0 D-ala D-ala ligase C-terminus Translin PF01997.16 gi|568164181|ref|YP_008947633.1| - 1.7e-09 38.0 2.2 2.8e-07 30.7 2.2 2.1 1 1 0 1 1 1 1 Translin family Coat_F PF07875.12 gi|568164181|ref|YP_008947633.1| - 0.0088 16.3 1.0 1.6 9.1 0.3 2.4 2 0 0 2 2 2 2 Coat F domain TPR_2 PF07719.17 gi|568164181|ref|YP_008947633.1| - 1.2 9.5 5.8 5.2 7.4 0.4 3.1 2 1 0 2 2 2 0 Tetratricopeptide repeat 3HCDH_N PF02737.18 gi|568164182|ref|YP_008947634.1| - 3.4e-49 167.2 0.0 5.3e-49 166.5 0.0 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 gi|568164182|ref|YP_008947634.1| - 2.1e-17 63.5 0.1 4.3e-17 62.5 0.1 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ApbA PF02558.16 gi|568164182|ref|YP_008947634.1| - 0.11 12.2 0.0 0.23 11.1 0.0 1.6 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Cupin_2 PF07883.11 gi|568164183|ref|YP_008947635.1| - 1.6e-15 56.5 0.1 2.4e-15 56.0 0.1 1.3 1 0 0 1 1 1 1 Cupin domain Cupin_1 PF00190.22 gi|568164183|ref|YP_008947635.1| - 3e-10 39.9 0.0 5.1e-10 39.2 0.0 1.3 1 0 0 1 1 1 1 Cupin AraC_binding PF02311.19 gi|568164183|ref|YP_008947635.1| - 1.8e-07 31.1 0.0 3.5e-07 30.2 0.0 1.4 1 0 0 1 1 1 1 AraC-like ligand binding domain CENP-C_C PF11699.8 gi|568164183|ref|YP_008947635.1| - 1.5e-05 25.1 0.0 2.4e-05 24.5 0.0 1.3 1 0 0 1 1 1 1 Mif2/CENP-C like ARD PF03079.14 gi|568164183|ref|YP_008947635.1| - 0.00011 22.4 1.3 0.00052 20.2 0.0 2.1 2 1 0 2 2 2 1 ARD/ARD' family Asp_Arg_Hydrox PF05118.15 gi|568164183|ref|YP_008947635.1| - 0.0011 18.8 0.0 0.0021 17.9 0.0 1.5 1 0 0 1 1 1 1 Aspartyl/Asparaginyl beta-hydroxylase EutQ PF06249.12 gi|568164183|ref|YP_008947635.1| - 0.013 15.3 0.0 0.02 14.6 0.0 1.3 1 0 0 1 1 1 0 Ethanolamine utilisation protein EutQ Auxin_BP PF02041.16 gi|568164183|ref|YP_008947635.1| - 0.026 14.2 0.0 0.064 12.9 0.0 1.6 1 1 0 1 1 1 0 Auxin binding protein Prefoldin_2 PF01920.20 gi|568164183|ref|YP_008947635.1| - 0.029 14.3 0.5 5.2 7.1 0.0 2.2 2 0 0 2 2 2 0 Prefoldin subunit DMSP_lyase PF16867.5 gi|568164183|ref|YP_008947635.1| - 0.13 11.9 0.1 0.24 11.0 0.1 1.4 2 0 0 2 2 2 0 Dimethlysulfonioproprionate lyase AraC_N PF06719.13 gi|568164183|ref|YP_008947635.1| - 0.14 11.8 0.0 0.27 10.9 0.0 1.4 1 0 0 1 1 1 0 AraC-type transcriptional regulator N-terminus DUF326 PF03860.16 gi|568164184|ref|YP_008947636.1| - 0.2 11.7 6.8 2.8 8.0 0.1 2.6 2 1 0 2 2 2 0 Domain of Unknown Function (DUF326) Fusion_gly PF00523.18 gi|568164184|ref|YP_008947636.1| - 1.1 7.4 5.4 1.2 7.3 5.4 1.0 1 0 0 1 1 1 0 Fusion glycoprotein F0 DUF2142 PF09913.9 gi|568164185|ref|YP_008947637.1| - 0.0012 17.8 6.1 0.0014 17.6 6.1 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2142) 7TM-7TMR_HD PF07698.11 gi|568164185|ref|YP_008947637.1| - 0.023 14.5 17.0 0.021 14.6 6.5 2.1 2 0 0 2 2 2 0 7TM receptor with intracellular HD hydrolase VIT1 PF01988.19 gi|568164185|ref|YP_008947637.1| - 0.068 13.0 16.3 0.12 12.2 4.0 2.1 1 1 1 2 2 2 0 VIT family NDUF_B12 PF08122.12 gi|568164185|ref|YP_008947637.1| - 0.14 12.2 1.4 7.6 6.7 0.1 2.8 3 0 0 3 3 3 0 NADH-ubiquinone oxidoreductase B12 subunit family DUF2070 PF09843.9 gi|568164185|ref|YP_008947637.1| - 0.3 9.3 10.1 0.36 9.0 10.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) EI24 PF07264.11 gi|568164185|ref|YP_008947637.1| - 0.87 9.8 8.8 14 5.8 8.8 2.1 1 1 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) GSHPx PF00255.19 gi|568164186|ref|YP_008947638.1| - 0.027 14.0 0.1 0.052 13.1 0.1 1.5 1 0 0 1 1 1 0 Glutathione peroxidase BiPBP_C PF06832.12 gi|568164186|ref|YP_008947638.1| - 0.078 13.0 0.0 0.16 12.0 0.0 1.5 1 0 0 1 1 1 0 Penicillin-Binding Protein C-terminus Family DUF4293 PF14126.6 gi|568164186|ref|YP_008947638.1| - 0.1 12.8 0.8 0.13 12.5 0.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4293) Adenosine_kin PF04008.14 gi|568164187|ref|YP_008947639.1| - 9e-78 259.4 0.1 1e-77 259.2 0.1 1.0 1 0 0 1 1 1 1 Adenosine specific kinase SSXT PF05030.12 gi|568164889|ref|YP_008947640.1| - 0.092 12.4 0.0 0.13 11.9 0.0 1.4 1 1 0 1 1 1 0 SSXT protein (N-terminal region) Radical_SAM PF04055.21 gi|568164188|ref|YP_008947641.1| - 1e-18 68.2 0.3 7.9e-18 65.4 0.0 2.3 3 0 0 3 3 3 1 Radical SAM superfamily zf-ribbon_3 PF13248.6 gi|568164188|ref|YP_008947641.1| - 0.004 16.5 6.7 0.12 11.8 0.1 2.9 3 0 0 3 3 3 2 zinc-ribbon domain DZR PF12773.7 gi|568164188|ref|YP_008947641.1| - 0.018 15.1 0.1 0.018 15.1 0.1 2.9 3 0 0 3 3 3 0 Double zinc ribbon Fer4_12 PF13353.6 gi|568164188|ref|YP_008947641.1| - 0.038 14.2 0.1 0.14 12.4 0.0 1.9 2 0 0 2 2 2 0 4Fe-4S single cluster domain TF_Zn_Ribbon PF08271.12 gi|568164188|ref|YP_008947641.1| - 0.52 9.9 6.5 0.81 9.3 1.3 3.2 3 1 0 3 3 3 0 TFIIB zinc-binding DNA_RNApol_7kD PF03604.13 gi|568164188|ref|YP_008947641.1| - 0.58 9.9 0.0 0.58 9.9 0.0 3.8 5 0 0 5 5 5 0 DNA directed RNA polymerase, 7 kDa subunit zf-C2H2 PF00096.26 gi|568164188|ref|YP_008947641.1| - 1.1 9.8 6.3 15 6.3 0.1 3.2 3 0 0 3 3 3 0 Zinc finger, C2H2 type zinc_ribbon_2 PF13240.6 gi|568164188|ref|YP_008947641.1| - 1.3 8.9 11.4 0.69 9.7 0.4 3.1 3 0 0 3 3 3 0 zinc-ribbon domain PriA_CRR PF18319.1 gi|568164188|ref|YP_008947641.1| - 1.7 8.7 5.9 0.47 10.5 0.3 2.7 2 0 0 2 2 2 0 PriA DNA helicase Cys-rich region (CRR) domain ECH_1 PF00378.20 gi|568164189|ref|YP_008947642.1| - 2.2e-69 233.6 0.0 2.5e-69 233.4 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|568164189|ref|YP_008947642.1| - 1.3e-40 140.0 0.0 1.9e-38 132.8 0.0 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase SDH_sah PF01972.16 gi|568164189|ref|YP_008947642.1| - 0.019 14.0 0.0 0.082 11.9 0.0 1.8 1 1 1 2 2 2 0 Serine dehydrogenase proteinase DUF2198 PF09964.9 gi|568164890|ref|YP_008947643.1| - 0.019 15.0 2.6 0.036 14.1 2.6 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2198) UbiA PF01040.18 gi|568164190|ref|YP_008947644.1| - 2.7e-47 161.2 21.3 3.6e-47 160.8 21.3 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family Homoserine_dh PF00742.19 gi|568164191|ref|YP_008947645.1| - 1.1e-48 165.4 0.0 1.6e-48 164.9 0.0 1.3 1 0 0 1 1 1 1 Homoserine dehydrogenase B3_4 PF03483.17 gi|568164192|ref|YP_008947646.1| - 2.7e-29 102.1 0.0 4.2e-29 101.4 0.0 1.3 1 0 0 1 1 1 1 B3/4 domain PmbA_TldD PF01523.16 gi|568164193|ref|YP_008947647.1| - 4.1e-42 145.0 0.3 7e-42 144.2 0.3 1.4 2 0 0 2 2 2 1 Putative modulator of DNA gyrase Tup_N PF08581.10 gi|568164193|ref|YP_008947647.1| - 0.034 14.5 0.6 0.086 13.2 0.6 1.7 1 0 0 1 1 1 0 Tup N-terminal PmbA_TldD PF01523.16 gi|568164194|ref|YP_008947648.1| - 1.5e-36 126.7 0.0 2.5e-36 126.0 0.0 1.3 1 0 0 1 1 1 1 Putative modulator of DNA gyrase Usp PF00582.26 gi|568164195|ref|YP_008947649.1| - 3.2e-38 131.4 0.3 3.6e-38 131.3 0.3 1.0 1 0 0 1 1 1 1 Universal stress protein family BPL_LplA_LipB PF03099.19 gi|568164196|ref|YP_008947650.1| - 5.2e-13 49.1 0.1 9.9e-13 48.1 0.1 1.4 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family Mad3_BUB1_I_2 PF17014.5 gi|568164196|ref|YP_008947650.1| - 0.054 13.6 0.1 0.098 12.8 0.1 1.4 1 0 0 1 1 1 0 Putative Mad3/BUB1 like region 1 protein Sua5_yciO_yrdC PF01300.18 gi|568164197|ref|YP_008947651.1| - 2.8e-56 189.8 0.0 4.3e-56 189.2 0.0 1.3 1 0 0 1 1 1 1 Telomere recombination SUA5 PF03481.13 gi|568164197|ref|YP_008947651.1| - 1e-23 84.4 0.0 1.5e-23 83.9 0.0 1.3 1 0 0 1 1 1 1 Putative GTP-binding controlling metal-binding Fe-S_assembly PF04384.13 gi|568164197|ref|YP_008947651.1| - 0.19 12.4 0.3 1.2 9.8 0.1 2.3 2 1 0 3 3 3 0 Iron-sulphur cluster assembly Oxidored_q6 PF01058.22 gi|568164198|ref|YP_008947652.1| - 4.3e-21 75.1 0.0 5.7e-21 74.7 0.0 1.2 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Peptidase_M20 PF01546.28 gi|568164199|ref|YP_008947653.1| - 1.9e-38 132.3 0.0 2.5e-38 131.9 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|568164199|ref|YP_008947653.1| - 3.2e-18 65.6 0.0 5.7e-18 64.8 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 gi|568164199|ref|YP_008947653.1| - 3.2e-09 36.8 0.0 1.2e-07 31.6 0.0 2.1 2 0 0 2 2 2 1 Peptidase family M28 Peptidase_M42 PF05343.14 gi|568164199|ref|YP_008947653.1| - 0.0098 14.9 0.0 0.8 8.7 0.0 2.8 3 0 0 3 3 3 1 M42 glutamyl aminopeptidase VIT1 PF01988.19 gi|568164200|ref|YP_008947654.1| - 6.6e-39 134.0 5.9 6.6e-39 134.0 5.9 2.1 2 1 0 2 2 2 1 VIT family Rubrerythrin PF02915.17 gi|568164200|ref|YP_008947654.1| - 4.9e-10 39.9 9.4 1e-09 38.9 9.4 1.5 1 0 0 1 1 1 1 Rubrerythrin DUF2299 PF10061.9 gi|568164200|ref|YP_008947654.1| - 0.09 12.5 0.1 0.29 10.9 0.1 1.9 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2299) SANT_DAMP1_like PF16282.5 gi|568164200|ref|YP_008947654.1| - 0.24 11.6 1.6 0.46 10.7 1.6 1.4 1 0 0 1 1 1 0 SANT/Myb-like domain of DAMP1 DRY_EERY PF09750.9 gi|568164200|ref|YP_008947654.1| - 0.72 10.1 4.9 1.7 8.9 0.9 2.3 2 0 0 2 2 2 0 Alternative splicing regulator DUF417 PF04224.12 gi|568164200|ref|YP_008947654.1| - 2 7.9 4.9 0.22 11.1 0.7 1.6 2 0 0 2 2 2 0 Protein of unknown function, DUF417 MFS_1 PF07690.16 gi|568164201|ref|YP_008947655.1| - 1.6e-55 188.5 45.4 1.6e-55 188.5 45.4 2.0 2 0 0 2 2 2 1 Major Facilitator Superfamily MFS_3 PF05977.13 gi|568164201|ref|YP_008947655.1| - 1.7e-09 36.6 12.1 2.1e-08 33.0 6.4 2.3 2 0 0 2 2 2 2 Transmembrane secretion effector PK PF00224.21 gi|568164202|ref|YP_008947656.1| - 1.7e-81 273.8 3.0 2.7e-81 273.2 3.0 1.3 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 gi|568164202|ref|YP_008947656.1| - 5.5e-21 75.0 0.1 1.8e-20 73.3 0.1 2.0 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain Pro_3_hydrox_C PF05373.11 gi|568164202|ref|YP_008947656.1| - 0.014 15.5 0.0 0.059 13.5 0.0 2.0 2 0 0 2 2 2 0 L-proline 3-hydroxylase, C-terminal HpcH_HpaI PF03328.14 gi|568164202|ref|YP_008947656.1| - 0.078 12.1 0.0 0.16 11.1 0.0 1.5 1 0 0 1 1 1 0 HpcH/HpaI aldolase/citrate lyase family DUF2299 PF10061.9 gi|568164203|ref|YP_008947657.1| - 2.9e-48 163.1 0.0 3.3e-48 162.9 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2299) DUF2070 PF09843.9 gi|568164891|ref|YP_008947658.1| - 2.3 6.4 18.8 2.6 6.2 18.8 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF2981 PF11200.8 gi|568164891|ref|YP_008947658.1| - 6.2 6.5 8.5 7.1 6.3 8.4 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2981) Methyltransf_11 PF08241.12 gi|568164204|ref|YP_008947659.1| - 1.5e-15 57.6 0.1 2.7e-15 56.8 0.0 1.5 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|568164204|ref|YP_008947659.1| - 5.2e-12 46.3 0.0 7.5e-12 45.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|568164204|ref|YP_008947659.1| - 2.4e-08 33.9 0.1 4.8e-08 32.9 0.1 1.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.15 gi|568164204|ref|YP_008947659.1| - 2.3e-07 30.9 0.0 3.6e-07 30.3 0.0 1.3 1 0 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_12 PF08242.12 gi|568164204|ref|YP_008947659.1| - 6.9e-07 29.9 0.0 1.2e-06 29.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|568164204|ref|YP_008947659.1| - 6e-06 26.2 0.0 7.7e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|568164204|ref|YP_008947659.1| - 3.4e-05 23.3 0.0 0.00019 20.8 0.0 1.9 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_9 PF08003.11 gi|568164204|ref|YP_008947659.1| - 0.0017 17.3 0.0 0.0025 16.8 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) MetW PF07021.12 gi|568164204|ref|YP_008947659.1| - 0.018 14.7 0.0 0.025 14.2 0.0 1.1 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW CMAS PF02353.20 gi|568164204|ref|YP_008947659.1| - 0.08 12.2 0.0 0.13 11.5 0.0 1.4 1 1 0 1 1 1 0 Mycolic acid cyclopropane synthetase Methyltransf_7 PF03492.15 gi|568164204|ref|YP_008947659.1| - 0.085 12.1 0.2 0.27 10.4 0.0 1.7 2 0 0 2 2 2 0 SAM dependent carboxyl methyltransferase TehB PF03848.14 gi|568164204|ref|YP_008947659.1| - 0.12 11.8 0.0 0.27 10.6 0.0 1.6 2 0 0 2 2 2 0 Tellurite resistance protein TehB ThiS PF02597.20 gi|568164205|ref|YP_008947660.1| - 1.3e-06 28.9 0.2 1.5e-06 28.7 0.2 1.1 1 0 0 1 1 1 1 ThiS family ThiS-like PF14453.6 gi|568164205|ref|YP_008947660.1| - 0.0065 16.5 0.0 0.0085 16.1 0.0 1.3 1 0 0 1 1 1 1 ThiS-like ubiquitin CRISPR_Cas2 PF09827.9 gi|568164205|ref|YP_008947660.1| - 0.013 15.6 0.0 0.015 15.4 0.0 1.3 1 0 0 1 1 1 0 CRISPR associated protein Cas2 TOBE_3 PF12857.7 gi|568164205|ref|YP_008947660.1| - 0.021 14.7 0.4 0.061 13.2 0.2 1.7 2 0 0 2 2 2 0 TOBE-like domain YukD PF08817.10 gi|568164205|ref|YP_008947660.1| - 0.028 15.1 0.5 0.057 14.1 0.4 1.6 1 1 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukD DUF3247 PF11607.8 gi|568164205|ref|YP_008947660.1| - 0.11 12.8 0.1 0.13 12.6 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3247) DAO PF01266.24 gi|568164207|ref|YP_008947662.1| - 7.9e-39 134.2 0.0 9.7e-39 133.9 0.0 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|568164207|ref|YP_008947662.1| - 9.8e-08 32.1 0.2 2.2e-07 31.0 0.2 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 gi|568164207|ref|YP_008947662.1| - 3.7e-05 23.1 0.0 4.6e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_2 PF07992.14 gi|568164207|ref|YP_008947662.1| - 0.00017 20.9 0.0 0.0031 16.8 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.16 gi|568164207|ref|YP_008947662.1| - 0.0002 21.0 0.3 0.00037 20.1 0.3 1.4 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Pyr_redox PF00070.27 gi|568164207|ref|YP_008947662.1| - 0.00031 21.3 3.3 0.0051 17.3 0.3 3.5 4 0 0 4 4 4 1 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 gi|568164207|ref|YP_008947662.1| - 0.0014 18.6 0.2 0.0022 17.9 0.2 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PMBR PF09373.10 gi|568164207|ref|YP_008947662.1| - 0.002 18.2 1.6 0.0061 16.7 0.1 2.6 2 0 0 2 2 2 1 Pseudomurein-binding repeat Trp_halogenase PF04820.14 gi|568164207|ref|YP_008947662.1| - 0.023 13.5 0.4 0.033 13.0 0.4 1.2 1 0 0 1 1 1 0 Tryptophan halogenase Thi4 PF01946.17 gi|568164207|ref|YP_008947662.1| - 0.04 13.2 0.3 0.061 12.6 0.3 1.3 1 0 0 1 1 1 0 Thi4 family FAD_binding_2 PF00890.24 gi|568164207|ref|YP_008947662.1| - 0.1 11.7 0.1 0.16 11.0 0.1 1.3 1 0 0 1 1 1 0 FAD binding domain NAD_binding_9 PF13454.6 gi|568164207|ref|YP_008947662.1| - 0.1 12.6 0.5 0.26 11.3 0.3 1.7 2 0 0 2 2 2 0 FAD-NAD(P)-binding DUF1955 PF09205.10 gi|568164208|ref|YP_008947663.1| - 1.4e-70 236.2 7.6 1.6e-70 236.0 7.6 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1955) RexA PF15969.5 gi|568164208|ref|YP_008947663.1| - 0.045 13.3 1.3 0.049 13.2 1.3 1.1 1 0 0 1 1 1 0 Intracellular sensor of Lambda phage, Abi component PLU-1 PF08429.11 gi|568164208|ref|YP_008947663.1| - 0.046 12.9 0.0 0.061 12.5 0.0 1.2 1 0 0 1 1 1 0 PLU-1-like protein DUF790 PF05626.11 gi|568164209|ref|YP_008947664.1| - 1.2e-114 383.0 5.7 1.5e-114 382.8 5.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF790) ResIII PF04851.15 gi|568164210|ref|YP_008947665.1| - 6e-26 91.5 0.0 2.7e-25 89.3 0.0 2.0 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 gi|568164210|ref|YP_008947665.1| - 3.5e-17 62.8 0.2 1.8e-16 60.5 0.2 2.1 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 gi|568164210|ref|YP_008947665.1| - 1.8e-16 60.1 0.5 3.5e-16 59.2 0.5 1.5 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase XPB_DRD PF18458.1 gi|568164210|ref|YP_008947665.1| - 4.5e-11 42.5 0.1 1.3e-10 41.0 0.1 1.9 1 0 0 1 1 1 1 Xeroderma pigmentosum group B helicase damage recognition domain DEAD PF00270.29 gi|568164210|ref|YP_008947665.1| - 1.8e-10 40.9 0.0 6.1e-10 39.1 0.0 1.9 1 1 0 1 1 1 1 DEAD/DEAH box helicase SNF2_N PF00176.23 gi|568164210|ref|YP_008947665.1| - 4.4e-07 28.9 0.1 4e-06 25.8 0.0 2.4 1 1 1 2 2 2 1 SNF2 family N-terminal domain SWI2_SNF2 PF18766.1 gi|568164210|ref|YP_008947665.1| - 0.00087 19.0 0.2 0.032 13.9 0.1 2.9 2 1 0 2 2 2 1 SWI2/SNF2 ATPase Helicase_C_2 PF13307.6 gi|568164210|ref|YP_008947665.1| - 0.011 15.9 1.5 0.51 10.5 0.0 3.1 2 2 1 3 3 3 0 Helicase C-terminal domain ORC2 PF04084.14 gi|568164210|ref|YP_008947665.1| - 0.039 12.9 0.0 2.1 7.2 0.0 2.3 2 0 0 2 2 2 0 Origin recognition complex subunit 2 CEP209_CC5 PF16574.5 gi|568164210|ref|YP_008947665.1| - 0.12 12.6 2.2 0.22 11.7 2.2 1.4 1 0 0 1 1 1 0 Coiled-coil region of centrosome protein CE290 HTH_24 PF13412.6 gi|568164211|ref|YP_008947666.1| - 3.2e-27 93.8 5.4 1.1e-15 57.0 0.1 2.3 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|568164211|ref|YP_008947666.1| - 1.5e-18 66.3 0.0 1.2e-10 41.0 0.0 2.3 2 0 0 2 2 2 2 AsnC-type helix-turn-helix domain TrmB PF01978.19 gi|568164211|ref|YP_008947666.1| - 2.9e-08 33.5 0.3 0.012 15.4 0.0 2.8 3 0 0 3 3 3 2 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|568164211|ref|YP_008947666.1| - 2.3e-06 27.4 0.0 0.059 13.3 0.0 2.3 2 0 0 2 2 2 2 MarR family MarR PF01047.22 gi|568164211|ref|YP_008947666.1| - 1.3e-05 25.1 0.1 0.075 13.0 0.0 2.4 2 0 0 2 2 2 2 MarR family HTH_Mga PF08280.11 gi|568164211|ref|YP_008947666.1| - 2.2e-05 24.4 0.3 0.0075 16.3 0.1 2.7 2 0 0 2 2 2 1 M protein trans-acting positive regulator (MGA) HTH domain HTH_5 PF01022.20 gi|568164211|ref|YP_008947666.1| - 0.00022 21.0 0.0 0.62 10.0 0.0 2.3 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_Crp_2 PF13545.6 gi|568164211|ref|YP_008947666.1| - 0.00023 21.1 0.0 0.12 12.4 0.0 2.5 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain Mga PF05043.13 gi|568164211|ref|YP_008947666.1| - 0.00033 21.2 0.2 0.64 10.6 0.1 2.5 2 0 0 2 2 2 2 Mga helix-turn-helix domain HTH_9 PF08221.11 gi|568164211|ref|YP_008947666.1| - 0.0005 20.1 0.3 1.1 9.4 0.1 2.4 2 0 0 2 2 2 2 RNA polymerase III subunit RPC82 helix-turn-helix domain Rrf2 PF02082.20 gi|568164211|ref|YP_008947666.1| - 0.0005 20.4 0.2 0.48 10.8 0.0 2.3 2 0 0 2 2 2 2 Transcriptional regulator TFIIE_alpha PF02002.17 gi|568164211|ref|YP_008947666.1| - 0.00062 19.6 1.0 0.13 12.1 0.1 2.5 2 0 0 2 2 2 1 TFIIE alpha subunit HTH_11 PF08279.12 gi|568164211|ref|YP_008947666.1| - 0.0027 17.6 1.2 0.46 10.5 0.3 2.4 2 0 0 2 2 2 1 HTH domain HTH_20 PF12840.7 gi|568164211|ref|YP_008947666.1| - 0.0032 17.5 0.0 3.1 7.9 0.0 2.4 2 0 0 2 2 2 2 Helix-turn-helix domain LexA_DNA_bind PF01726.16 gi|568164211|ref|YP_008947666.1| - 0.0054 16.5 0.1 0.66 9.8 0.0 2.4 2 0 0 2 2 2 1 LexA DNA binding domain B-block_TFIIIC PF04182.12 gi|568164211|ref|YP_008947666.1| - 0.0054 16.9 0.3 0.19 11.9 0.0 2.3 2 0 0 2 2 2 1 B-block binding subunit of TFIIIC Phage_rep_O PF04492.13 gi|568164211|ref|YP_008947666.1| - 0.016 15.8 0.1 9.2 6.9 0.0 2.4 2 0 0 2 2 2 0 Bacteriophage replication protein O HTH_23 PF13384.6 gi|568164211|ref|YP_008947666.1| - 0.044 13.6 0.0 4.6 7.2 0.0 2.3 2 0 0 2 2 2 0 Homeodomain-like domain HTH_45 PF14947.6 gi|568164211|ref|YP_008947666.1| - 0.044 13.8 1.7 1.9 8.5 0.2 2.5 2 0 0 2 2 2 0 Winged helix-turn-helix UPF0175 PF03683.13 gi|568164211|ref|YP_008947666.1| - 0.12 12.1 0.0 0.37 10.5 0.0 1.8 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0175) Sigma70_r4_2 PF08281.12 gi|568164211|ref|YP_008947666.1| - 0.12 12.1 0.1 2.5 7.9 0.0 2.2 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_28 PF13518.6 gi|568164211|ref|YP_008947666.1| - 0.16 12.1 0.0 5.5 7.2 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain NPCC PF08058.11 gi|568164212|ref|YP_008947667.1| - 1.4 8.9 5.0 2.6 8.1 4.3 1.8 1 1 0 1 1 1 0 Nuclear pore complex component Rdx PF10262.9 gi|568164892|ref|YP_008947668.1| - 0.012 15.8 0.0 0.013 15.7 0.0 1.3 1 1 0 1 1 1 0 Rdx family BppU_N PF10651.9 gi|568164892|ref|YP_008947668.1| - 0.013 15.3 0.7 0.045 13.4 0.2 1.8 1 1 1 2 2 2 0 BppU N-terminal domain Glyco_hydro_32C PF08244.12 gi|568164892|ref|YP_008947668.1| - 0.049 13.6 0.1 0.058 13.4 0.1 1.2 1 0 0 1 1 1 0 Glycosyl hydrolases family 32 C terminal ECF-ribofla_trS PF07155.12 gi|568164892|ref|YP_008947668.1| - 0.29 11.1 4.7 0.26 11.3 1.5 2.0 1 1 1 2 2 2 0 ECF-type riboflavin transporter, S component Peptidase_M32 PF02074.15 gi|568164213|ref|YP_008947669.1| - 5e-153 510.4 0.0 5.9e-153 510.1 0.0 1.0 1 0 0 1 1 1 1 Carboxypeptidase Taq (M32) metallopeptidase MMPL PF03176.15 gi|568164214|ref|YP_008947670.1| - 3.5e-65 220.1 20.2 6.3e-35 120.7 7.5 2.6 3 0 0 3 3 3 2 MMPL family Sterol-sensing PF12349.8 gi|568164214|ref|YP_008947670.1| - 0.0025 17.7 4.0 0.0025 17.7 4.0 3.0 2 0 0 2 2 2 1 Sterol-sensing domain of SREBP cleavage-activation DUF3014 PF11219.8 gi|568164214|ref|YP_008947670.1| - 0.042 14.1 0.0 0.1 12.8 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3014) EPOP PF15223.6 gi|568164214|ref|YP_008947670.1| - 0.24 10.7 2.2 0.43 9.9 1.2 1.7 2 0 0 2 2 2 0 Elongin BC and Polycomb repressive complex 2-associated protein FlxA PF14282.6 gi|568164214|ref|YP_008947670.1| - 0.26 11.3 3.1 0.57 10.2 3.1 1.5 1 0 0 1 1 1 0 FlxA-like protein Methyltransf_11 PF08241.12 gi|568164215|ref|YP_008947671.1| - 6.6e-10 39.5 0.0 1.2e-09 38.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|568164215|ref|YP_008947671.1| - 0.0002 22.0 0.0 0.00035 21.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.15 gi|568164215|ref|YP_008947671.1| - 0.00033 20.6 0.0 0.00038 20.4 0.0 1.2 1 0 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_23 PF13489.6 gi|568164215|ref|YP_008947671.1| - 0.14 12.0 0.0 0.19 11.6 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain ABC1 PF03109.16 gi|568164216|ref|YP_008947672.1| - 1.2e-24 86.8 0.0 2.6e-24 85.7 0.0 1.6 1 0 0 1 1 1 1 ABC1 family RIO1 PF01163.22 gi|568164216|ref|YP_008947672.1| - 3.4e-06 26.8 0.9 1.2e-05 25.0 0.0 2.2 3 0 0 3 3 3 1 RIO1 family Pkinase PF00069.25 gi|568164216|ref|YP_008947672.1| - 3e-05 23.5 0.5 0.00045 19.7 0.5 2.3 1 1 0 1 1 1 1 Protein kinase domain APH PF01636.23 gi|568164216|ref|YP_008947672.1| - 0.2 11.6 0.1 0.76 9.7 0.1 1.9 1 1 1 2 2 2 0 Phosphotransferase enzyme family HSP20 PF00011.21 gi|568164217|ref|YP_008947673.1| - 4.2e-09 36.5 0.0 5.1e-09 36.2 0.0 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|568164217|ref|YP_008947673.1| - 1.3e-08 34.2 0.0 2e-08 33.7 0.0 1.3 1 0 0 1 1 1 1 HSP20-like domain found in ArsA CCG PF02754.16 gi|568164218|ref|YP_008947674.1| - 1.6e-10 41.1 0.0 9.4e-08 32.2 0.1 2.6 2 0 0 2 2 2 2 Cysteine-rich domain LUD_dom PF02589.15 gi|568164219|ref|YP_008947675.1| - 1.3e-53 181.5 0.6 2.5e-53 180.6 0.6 1.4 1 1 0 1 1 1 1 LUD domain Fer4_8 PF13183.6 gi|568164219|ref|YP_008947675.1| - 6.5e-11 42.5 3.0 1.1e-10 41.8 3.0 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|568164219|ref|YP_008947675.1| - 3.4e-08 33.5 2.0 0.005 16.9 0.2 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|568164219|ref|YP_008947675.1| - 1.2e-06 29.0 5.4 2.1e-06 28.2 5.4 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|568164219|ref|YP_008947675.1| - 5.9e-06 26.7 5.4 1.8e-05 25.2 5.6 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|568164219|ref|YP_008947675.1| - 0.00042 20.0 8.6 0.0019 18.0 1.8 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_20 PF14691.6 gi|568164219|ref|YP_008947675.1| - 0.001 18.8 2.1 0.12 12.2 0.1 2.5 2 0 0 2 2 2 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_9 PF13187.6 gi|568164219|ref|YP_008947675.1| - 0.0017 18.5 6.3 0.12 12.5 8.7 2.2 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|568164219|ref|YP_008947675.1| - 0.0018 18.3 3.9 0.0075 16.4 3.9 1.9 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|568164219|ref|YP_008947675.1| - 0.0087 16.1 10.1 0.021 14.9 2.6 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_2 PF12797.7 gi|568164219|ref|YP_008947675.1| - 0.016 15.3 6.5 0.074 13.2 1.3 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_16 PF13484.6 gi|568164219|ref|YP_008947675.1| - 0.017 16.0 8.0 0.11 13.5 8.0 2.2 1 1 0 1 1 1 0 4Fe-4S double cluster binding domain Fer4_22 PF17179.4 gi|568164219|ref|YP_008947675.1| - 0.019 15.8 4.2 0.41 11.5 0.8 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|568164219|ref|YP_008947675.1| - 0.03 14.5 1.4 1 9.6 0.0 2.3 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|568164219|ref|YP_008947675.1| - 0.034 14.7 1.4 0.034 14.7 1.4 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain DUF4448 PF14610.6 gi|568164893|ref|YP_008947676.1| - 0.0088 15.8 1.1 0.035 13.9 0.9 2.2 1 1 0 1 1 1 1 Protein of unknown function (DUF4448) DNA_pol3_beta PF00712.19 gi|568164893|ref|YP_008947676.1| - 0.048 13.8 0.3 0.048 13.8 0.3 2.1 2 0 0 2 2 2 0 DNA polymerase III beta subunit, N-terminal domain DUF515 PF04415.12 gi|568164893|ref|YP_008947676.1| - 0.15 10.4 18.4 0.29 9.5 18.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF515) DUF1180 PF06679.12 gi|568164893|ref|YP_008947676.1| - 0.16 12.3 4.4 0.31 11.4 4.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) MFS_1 PF07690.16 gi|568164220|ref|YP_008947677.1| - 1.2e-35 123.1 63.1 2.4e-26 92.5 29.6 3.2 1 1 1 3 3 3 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|568164220|ref|YP_008947677.1| - 3.4e-08 32.8 36.1 9.4e-06 24.7 14.3 3.8 3 1 1 4 4 4 3 Sugar (and other) transporter MFS_3 PF05977.13 gi|568164220|ref|YP_008947677.1| - 0.00054 18.5 2.9 0.00054 18.5 2.9 2.0 2 0 0 2 2 2 1 Transmembrane secretion effector DUF2583 PF10762.9 gi|568164220|ref|YP_008947677.1| - 9.5 6.7 6.7 2.9 8.4 0.3 3.5 3 0 0 3 3 3 0 Protein of unknown function (DUF2583) HTH_27 PF13463.6 gi|568164221|ref|YP_008947678.1| - 6.9e-15 55.3 0.4 1.2e-14 54.5 0.4 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR PF01047.22 gi|568164221|ref|YP_008947678.1| - 4.3e-14 52.2 0.1 1e-13 51.0 0.1 1.7 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|568164221|ref|YP_008947678.1| - 2.9e-10 39.9 0.0 4.4e-10 39.3 0.0 1.3 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|568164221|ref|YP_008947678.1| - 1.5e-08 34.3 1.0 2.6e-08 33.6 1.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_34 PF13601.6 gi|568164221|ref|YP_008947678.1| - 2.7e-07 30.7 0.3 4.6e-07 29.9 0.3 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_5 PF01022.20 gi|568164221|ref|YP_008947678.1| - 4.7e-07 29.6 0.6 1.1e-06 28.4 0.1 1.9 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family Fe_dep_repress PF01325.19 gi|568164221|ref|YP_008947678.1| - 6.4e-05 23.1 0.5 0.00012 22.2 0.5 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain DUF4423 PF14394.6 gi|568164221|ref|YP_008947678.1| - 0.00018 21.3 0.7 0.00027 20.7 0.6 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_36 PF13730.6 gi|568164221|ref|YP_008947678.1| - 0.00057 19.8 0.0 0.0012 18.8 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_45 PF14947.6 gi|568164221|ref|YP_008947678.1| - 0.00098 19.1 3.6 0.0029 17.6 3.2 1.9 1 1 1 2 2 2 1 Winged helix-turn-helix DUF4362 PF14275.6 gi|568164221|ref|YP_008947678.1| - 0.0033 17.7 1.4 0.0064 16.7 1.3 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4362) HTH_IclR PF09339.10 gi|568164221|ref|YP_008947678.1| - 0.0036 17.1 0.0 0.0082 15.9 0.0 1.6 1 0 0 1 1 1 1 IclR helix-turn-helix domain HxlR PF01638.17 gi|568164221|ref|YP_008947678.1| - 0.0056 16.5 0.6 0.0095 15.8 0.6 1.4 1 0 0 1 1 1 1 HxlR-like helix-turn-helix RuvB_C PF05491.13 gi|568164221|ref|YP_008947678.1| - 0.0063 16.4 0.4 0.018 14.9 0.2 1.9 1 1 0 2 2 2 1 RuvB C-terminal winged helix domain PadR PF03551.14 gi|568164221|ref|YP_008947678.1| - 0.012 15.5 0.1 0.024 14.6 0.1 1.6 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family Rrf2 PF02082.20 gi|568164221|ref|YP_008947678.1| - 0.014 15.7 0.1 0.033 14.5 0.1 1.6 1 0 0 1 1 1 0 Transcriptional regulator GFRP PF06399.13 gi|568164221|ref|YP_008947678.1| - 0.015 15.2 0.3 0.033 14.1 0.2 1.6 1 1 0 1 1 1 0 GTP cyclohydrolase I feedback regulatory protein (GFRP) Ead_Ea22 PF13935.6 gi|568164221|ref|YP_008947678.1| - 0.023 15.4 0.3 0.086 13.5 0.0 1.9 1 1 1 2 2 2 0 Ead/Ea22-like protein DUF2250 PF10007.9 gi|568164221|ref|YP_008947678.1| - 0.025 14.7 1.2 0.043 13.9 1.1 1.6 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) Ribosomal_S19e PF01090.19 gi|568164221|ref|YP_008947678.1| - 0.056 13.1 0.2 0.072 12.8 0.2 1.3 1 0 0 1 1 1 0 Ribosomal protein S19e Staphostatin_A PF09022.10 gi|568164221|ref|YP_008947678.1| - 0.095 12.6 1.4 0.16 11.9 1.4 1.4 1 0 0 1 1 1 0 Staphostatin A HTH_Crp_2 PF13545.6 gi|568164221|ref|YP_008947678.1| - 0.1 12.6 0.0 0.23 11.5 0.0 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain B-block_TFIIIC PF04182.12 gi|568164221|ref|YP_008947678.1| - 0.11 12.7 0.2 0.25 11.5 0.2 1.5 1 1 0 1 1 1 0 B-block binding subunit of TFIIIC NUC PF18510.1 gi|568164221|ref|YP_008947678.1| - 0.14 12.6 1.6 0.23 11.9 1.0 1.6 1 1 1 2 2 2 0 Nuclease domain dUTPase PF00692.19 gi|568164222|ref|YP_008947680.1| - 4.9e-07 29.5 0.0 8.4e-07 28.7 0.0 1.3 1 0 0 1 1 1 1 dUTPase DUF2070 PF09843.9 gi|568164895|ref|YP_008947681.1| - 0.0017 16.8 4.7 0.0019 16.6 4.7 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2070) SurA_N_2 PF13623.6 gi|568164895|ref|YP_008947681.1| - 0.087 12.7 0.6 0.14 12.1 0.6 1.3 1 0 0 1 1 1 0 SurA N-terminal domain SGL PF08450.12 gi|568164223|ref|YP_008947682.1| - 2.8e-76 256.4 0.0 3.2e-76 256.2 0.0 1.0 1 0 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region Reg_prop PF07494.11 gi|568164223|ref|YP_008947682.1| - 0.0012 18.8 0.4 1.5 9.3 0.0 3.5 3 0 0 3 3 3 2 Two component regulator propeller Str_synth PF03088.16 gi|568164223|ref|YP_008947682.1| - 0.012 15.7 0.0 0.042 14.0 0.0 1.9 1 0 0 1 1 1 0 Strictosidine synthase Arylesterase PF01731.20 gi|568164223|ref|YP_008947682.1| - 0.12 12.6 0.0 0.29 11.4 0.0 1.7 1 0 0 1 1 1 0 Arylesterase MRJP PF03022.16 gi|568164223|ref|YP_008947682.1| - 0.17 11.2 0.0 0.72 9.1 0.0 2.0 2 1 0 2 2 2 0 Major royal jelly protein Peptidase_M48 PF01435.18 gi|568164896|ref|YP_008947683.1| - 1.3e-20 74.0 0.0 3.7e-20 72.5 0.0 1.7 1 1 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|568164896|ref|YP_008947683.1| - 2.6e-07 30.1 4.0 2.6e-07 30.1 4.0 1.4 1 1 0 1 1 1 1 BlaR1 peptidase M56 DUF5313 PF17240.2 gi|568164896|ref|YP_008947683.1| - 0.037 14.4 2.3 0.08 13.4 2.3 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5313) Pex24p PF06398.11 gi|568164896|ref|YP_008947683.1| - 0.054 12.5 7.0 0.18 10.8 7.6 1.5 2 0 0 2 2 2 0 Integral peroxisomal membrane peroxin SprT-like PF10263.9 gi|568164896|ref|YP_008947683.1| - 0.055 13.3 0.1 0.11 12.4 0.1 1.5 1 0 0 1 1 1 0 SprT-like family Peptidase_S9 PF00326.21 gi|568164225|ref|YP_008947687.1| - 8.3e-50 169.2 0.1 1.1e-49 168.8 0.1 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_1 PF00561.20 gi|568164225|ref|YP_008947687.1| - 1.8e-09 37.7 0.6 1.8e-06 27.8 0.4 2.2 1 1 1 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|568164225|ref|YP_008947687.1| - 8.9e-08 31.7 0.2 0.0044 16.3 0.1 2.2 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Peptidase_S15 PF02129.18 gi|568164225|ref|YP_008947687.1| - 1.2e-07 31.6 0.4 5.9e-05 22.8 0.4 2.3 1 1 1 2 2 2 2 X-Pro dipeptidyl-peptidase (S15 family) DLH PF01738.18 gi|568164225|ref|YP_008947687.1| - 3.2e-05 23.6 0.0 8.4e-05 22.2 0.0 1.7 1 1 0 1 1 1 1 Dienelactone hydrolase family DPPIV_N PF00930.21 gi|568164225|ref|YP_008947687.1| - 0.00037 19.4 0.0 0.0089 14.8 0.0 2.4 3 0 0 3 3 3 1 Dipeptidyl peptidase IV (DPP IV) N-terminal region Abhydrolase_6 PF12697.7 gi|568164225|ref|YP_008947687.1| - 0.0071 17.0 0.0 0.0098 16.5 0.0 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family FSH1 PF03959.13 gi|568164225|ref|YP_008947687.1| - 0.015 15.0 0.0 0.028 14.1 0.0 1.4 1 0 0 1 1 1 0 Serine hydrolase (FSH1) Abhydrolase_2 PF02230.16 gi|568164225|ref|YP_008947687.1| - 0.17 11.7 0.2 0.41 10.4 0.0 1.6 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase Op_neuropeptide PF08035.11 gi|568164225|ref|YP_008947687.1| - 0.41 10.6 1.7 3 7.8 0.3 2.4 2 0 0 2 2 2 0 Opioids neuropeptide DUF3827 PF12877.7 gi|568164227|ref|YP_008947690.1| - 0.15 10.4 0.7 0.23 9.8 0.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3827) Cuticle_1 PF08140.11 gi|568164230|ref|YP_008947693.1| - 0.066 13.3 0.0 0.14 12.2 0.0 1.5 1 0 0 1 1 1 0 Crustacean cuticle protein repeat DUF998 PF06197.13 gi|568164231|ref|YP_008947694.1| - 2.4e-20 72.9 17.1 2.7e-20 72.7 17.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF998) Melittin PF01372.17 gi|568164231|ref|YP_008947694.1| - 0.22 11.5 1.4 7.1 6.8 1.2 3.0 1 1 1 2 2 2 0 Melittin ADH_N PF08240.12 gi|568164233|ref|YP_008947696.1| - 5.6e-26 90.6 3.1 8.2e-26 90.0 0.2 2.2 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|568164233|ref|YP_008947696.1| - 5.8e-23 81.3 2.7 1e-22 80.5 0.3 2.3 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|568164233|ref|YP_008947696.1| - 1.1e-07 33.0 0.0 2e-07 32.2 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ELFV_dehydrog PF00208.21 gi|568164233|ref|YP_008947696.1| - 0.014 15.2 0.1 0.02 14.6 0.1 1.3 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SIS_2 PF13580.6 gi|568164233|ref|YP_008947696.1| - 0.014 15.4 0.1 0.069 13.2 0.1 2.0 2 0 0 2 2 2 0 SIS domain NmrA PF05368.13 gi|568164233|ref|YP_008947696.1| - 0.022 14.4 0.1 0.033 13.8 0.1 1.3 1 0 0 1 1 1 0 NmrA-like family PALP PF00291.25 gi|568164233|ref|YP_008947696.1| - 0.033 13.6 0.0 0.052 13.0 0.0 1.3 1 0 0 1 1 1 0 Pyridoxal-phosphate dependent enzyme Arteri_nsp7a PF16749.5 gi|568164233|ref|YP_008947696.1| - 0.11 12.7 0.2 4.5 7.5 0.0 2.6 3 0 0 3 3 3 0 Arterivirus nonstructural protein 7 alpha 2-Hacid_dh_C PF02826.19 gi|568164233|ref|YP_008947696.1| - 0.15 11.4 0.0 0.27 10.6 0.0 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RmlD_sub_bind PF04321.17 gi|568164233|ref|YP_008947696.1| - 0.22 10.6 0.0 0.32 10.0 0.0 1.2 1 0 0 1 1 1 0 RmlD substrate binding domain Peptidase_M19 PF01244.21 gi|568164234|ref|YP_008947697.1| - 7.3e-73 245.5 0.0 8.3e-73 245.3 0.0 1.0 1 0 0 1 1 1 1 Membrane dipeptidase (Peptidase family M19) RMMBL PF07521.12 gi|568164234|ref|YP_008947697.1| - 0.00017 21.5 0.2 0.00036 20.4 0.2 1.5 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain HMA PF00403.26 gi|568164235|ref|YP_008947698.1| - 8.3e-13 48.6 0.1 1.1e-12 48.2 0.1 1.2 1 0 0 1 1 1 1 Heavy-metal-associated domain EcoRI PF02963.16 gi|568164235|ref|YP_008947698.1| - 0.14 11.2 1.0 0.69 8.9 0.1 1.9 1 1 1 2 2 2 0 Restriction endonuclease EcoRI Na_Ca_ex PF01699.24 gi|568164236|ref|YP_008947699.1| - 3.6e-28 98.4 34.7 7.5e-16 58.4 14.2 2.1 2 0 0 2 2 2 2 Sodium/calcium exchanger protein Pkinase PF00069.25 gi|568164900|ref|YP_008947700.1| - 9.1e-40 136.7 0.1 1.3e-39 136.2 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 gi|568164900|ref|YP_008947700.1| - 4.4e-19 68.8 0.0 3.2e-18 66.0 0.0 2.2 1 1 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 gi|568164900|ref|YP_008947700.1| - 4.9e-06 26.1 0.0 6.3e-05 22.4 0.0 2.0 2 0 0 2 2 2 1 Kinase-like Kdo PF06293.14 gi|568164900|ref|YP_008947700.1| - 0.012 15.0 0.0 0.02 14.3 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family MFS_1 PF07690.16 gi|568164238|ref|YP_008947702.1| - 5.5e-30 104.5 48.1 9.3e-21 74.1 20.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF5353 PF17304.2 gi|568164238|ref|YP_008947702.1| - 0.95 9.3 6.7 1.2 8.9 0.6 3.5 3 0 0 3 3 3 0 Family of unknown function (DUF5353) ABC2_membrane PF01061.24 gi|568164239|ref|YP_008947703.1| - 1.1e-13 51.1 35.9 1.1e-13 51.1 35.9 1.7 1 1 1 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|568164239|ref|YP_008947703.1| - 2e-06 27.2 36.0 2e-06 27.2 36.0 2.2 1 1 1 2 2 2 1 ABC-2 family transporter protein Phage_holin_2_3 PF16080.5 gi|568164239|ref|YP_008947703.1| - 2.6 7.9 6.3 1 9.2 1.3 2.7 2 0 0 2 2 2 0 Bacteriophage holin family HP1 ABC_tran PF00005.27 gi|568164240|ref|YP_008947704.1| - 1.7e-31 109.6 0.0 2.8e-31 108.9 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|568164240|ref|YP_008947704.1| - 5.3e-15 56.0 0.5 1.9e-10 41.0 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|568164240|ref|YP_008947704.1| - 2.9e-07 30.6 0.1 0.0024 17.6 0.0 2.4 2 1 0 3 3 2 2 AAA ATPase domain AAA_16 PF13191.6 gi|568164240|ref|YP_008947704.1| - 4.7e-05 23.8 0.0 9.6e-05 22.8 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 gi|568164240|ref|YP_008947704.1| - 6.8e-05 22.4 0.1 0.27 10.6 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|568164240|ref|YP_008947704.1| - 0.00038 20.4 0.0 0.00083 19.3 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase IstB_IS21 PF01695.17 gi|568164240|ref|YP_008947704.1| - 0.00077 19.2 0.1 1.6 8.5 0.0 2.9 2 1 0 2 2 2 2 IstB-like ATP binding protein AAA_22 PF13401.6 gi|568164240|ref|YP_008947704.1| - 0.00085 19.6 0.3 0.0052 17.1 0.3 2.3 2 1 0 2 2 1 1 AAA domain AAA_14 PF13173.6 gi|568164240|ref|YP_008947704.1| - 0.00094 19.2 0.2 0.0087 16.1 0.0 2.5 1 1 0 2 2 2 1 AAA domain AAA_18 PF13238.6 gi|568164240|ref|YP_008947704.1| - 0.0015 19.0 0.2 0.0099 16.4 0.1 2.3 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|568164240|ref|YP_008947704.1| - 0.0019 18.4 0.0 0.0045 17.2 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|568164240|ref|YP_008947704.1| - 0.0021 18.5 0.1 0.0063 16.9 0.1 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) TsaE PF02367.17 gi|568164240|ref|YP_008947704.1| - 0.0022 18.0 0.0 0.0067 16.4 0.0 1.7 2 0 0 2 2 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_24 PF13479.6 gi|568164240|ref|YP_008947704.1| - 0.0023 17.7 0.1 0.076 12.7 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.6 gi|568164240|ref|YP_008947704.1| - 0.0025 18.3 0.5 0.0052 17.3 0.4 1.8 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|568164240|ref|YP_008947704.1| - 0.0033 17.1 0.0 0.0076 16.0 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF4162 PF13732.6 gi|568164240|ref|YP_008947704.1| - 0.0034 18.1 0.0 0.011 16.4 0.0 2.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) NB-ARC PF00931.22 gi|568164240|ref|YP_008947704.1| - 0.0062 15.7 0.1 0.054 12.7 0.0 2.2 2 0 0 2 2 2 1 NB-ARC domain NTPase_1 PF03266.15 gi|568164240|ref|YP_008947704.1| - 0.019 14.9 0.3 0.36 10.7 0.1 2.4 2 0 0 2 2 2 0 NTPase AAA_30 PF13604.6 gi|568164240|ref|YP_008947704.1| - 0.02 14.7 0.0 0.034 13.9 0.0 1.6 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|568164240|ref|YP_008947704.1| - 0.021 14.8 0.1 0.052 13.5 0.0 1.7 2 0 0 2 2 2 0 NACHT domain AAA_25 PF13481.6 gi|568164240|ref|YP_008947704.1| - 0.025 14.2 0.0 0.13 11.8 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_7 PF12775.7 gi|568164240|ref|YP_008947704.1| - 0.032 13.7 0.0 0.055 13.0 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region Roc PF08477.13 gi|568164240|ref|YP_008947704.1| - 0.041 14.1 0.0 0.13 12.5 0.0 1.8 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase ATPase_2 PF01637.18 gi|568164240|ref|YP_008947704.1| - 0.047 13.6 0.7 0.16 11.8 0.0 2.1 3 0 0 3 3 2 0 ATPase domain predominantly from Archaea MobB PF03205.14 gi|568164240|ref|YP_008947704.1| - 0.066 13.1 0.0 0.16 11.9 0.0 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_28 PF13521.6 gi|568164240|ref|YP_008947704.1| - 0.067 13.4 0.0 0.18 12.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_27 PF13514.6 gi|568164240|ref|YP_008947704.1| - 0.068 12.8 0.0 0.15 11.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain DLIC PF05783.11 gi|568164240|ref|YP_008947704.1| - 0.073 11.9 0.0 0.11 11.4 0.0 1.2 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) AAA_5 PF07728.14 gi|568164240|ref|YP_008947704.1| - 0.075 13.0 0.1 0.14 12.2 0.1 1.8 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) cobW PF02492.19 gi|568164240|ref|YP_008947704.1| - 0.098 12.2 0.0 0.2 11.2 0.0 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain PqqD PF05402.12 gi|568164240|ref|YP_008947704.1| - 0.14 12.5 1.2 44 4.5 0.1 3.7 4 1 0 4 4 3 0 Coenzyme PQQ synthesis protein D (PqqD) PhoH PF02562.16 gi|568164240|ref|YP_008947704.1| - 0.16 11.4 0.0 0.27 10.7 0.0 1.3 1 0 0 1 1 1 0 PhoH-like protein RNA_helicase PF00910.22 gi|568164240|ref|YP_008947704.1| - 0.19 12.1 0.0 0.49 10.8 0.0 1.7 1 0 0 1 1 1 0 RNA helicase SRP54 PF00448.22 gi|568164240|ref|YP_008947704.1| - 0.2 11.3 0.1 0.31 10.6 0.1 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain Aldedh PF00171.22 gi|568164241|ref|YP_008947705.1| - 1e-163 545.1 0.0 1.2e-163 545.0 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Pirin_C PF05726.13 gi|568164241|ref|YP_008947705.1| - 0.13 12.7 0.1 12 6.4 0.0 3.0 1 1 2 3 3 3 0 Pirin C-terminal cupin domain RsgI_N PF12791.7 gi|568164241|ref|YP_008947705.1| - 0.13 12.2 0.7 2.2 8.3 0.0 3.3 2 1 1 3 3 3 0 Anti-sigma factor N-terminus Xan_ur_permease PF00860.20 gi|568164242|ref|YP_008947706.1| - 1.7e-20 73.1 50.7 4.4e-19 68.4 50.7 2.2 1 1 0 1 1 1 1 Permease family UPF0114 PF03350.16 gi|568164242|ref|YP_008947706.1| - 0.038 14.2 0.6 0.038 14.2 0.6 3.5 3 1 0 3 3 3 0 Uncharacterized protein family, UPF0114 DUF5453 PF17534.2 gi|568164242|ref|YP_008947706.1| - 0.16 11.9 4.0 1.4 8.8 0.1 2.8 2 0 0 2 2 2 0 Family of unknown function (DUF5453) Pyr_redox_2 PF07992.14 gi|568164243|ref|YP_008947707.1| - 8.8e-44 149.9 0.2 1.2e-43 149.4 0.2 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|568164243|ref|YP_008947707.1| - 3.7e-17 62.7 5.5 5.5e-16 58.9 0.5 2.8 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|568164243|ref|YP_008947707.1| - 2.4e-06 27.0 0.0 5.4e-06 25.9 0.0 1.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|568164243|ref|YP_008947707.1| - 5.9e-05 22.5 0.8 0.13 11.5 0.1 2.5 2 1 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain DAO PF01266.24 gi|568164243|ref|YP_008947707.1| - 0.00063 19.4 1.0 0.51 9.9 0.0 3.2 3 1 1 4 4 4 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|568164243|ref|YP_008947707.1| - 0.0059 16.8 0.1 3.3 8.0 0.0 2.4 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain Oxidored_nitro PF00148.19 gi|568164243|ref|YP_008947707.1| - 0.0063 15.3 0.0 0.0095 14.7 0.0 1.2 1 0 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase HI0933_like PF03486.14 gi|568164243|ref|YP_008947707.1| - 0.095 11.4 4.1 2.7 6.6 0.1 3.7 2 2 2 4 4 4 0 HI0933-like protein FAD_oxidored PF12831.7 gi|568164243|ref|YP_008947707.1| - 0.17 11.2 0.8 0.79 9.0 0.0 2.2 2 1 0 2 2 2 0 FAD dependent oxidoreductase NTP_transferase PF00483.23 gi|568164244|ref|YP_008947708.1| - 2e-52 178.2 0.0 2.5e-52 177.9 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|568164244|ref|YP_008947708.1| - 6.9e-07 29.8 0.0 9.8e-07 29.3 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Fucokinase PF07959.12 gi|568164244|ref|YP_008947708.1| - 2.9e-06 26.5 0.1 3.9e-06 26.1 0.1 1.2 1 0 0 1 1 1 1 L-fucokinase Hexapep PF00132.24 gi|568164244|ref|YP_008947708.1| - 4.9e-06 26.0 11.3 2.4e-05 23.9 0.6 5.5 4 1 2 6 6 6 2 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|568164244|ref|YP_008947708.1| - 0.022 14.5 0.9 0.022 14.5 0.9 4.7 5 1 0 5 5 5 0 Hexapeptide repeat of succinyl-transferase GDP_Man_Dehyd PF16363.5 gi|568164245|ref|YP_008947709.1| - 5.7e-63 213.3 0.0 7.6e-63 212.9 0.0 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 gi|568164245|ref|YP_008947709.1| - 3.5e-56 190.4 0.0 4.2e-56 190.1 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 gi|568164245|ref|YP_008947709.1| - 4.6e-19 68.6 0.0 5.5e-19 68.4 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain 3Beta_HSD PF01073.19 gi|568164245|ref|YP_008947709.1| - 1.5e-15 57.0 0.0 2e-15 56.5 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|568164245|ref|YP_008947709.1| - 2.5e-15 56.4 1.1 3.2e-14 52.8 1.1 2.3 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 gi|568164245|ref|YP_008947709.1| - 2e-10 40.3 1.6 2.3e-09 36.8 0.1 2.7 2 1 0 2 2 2 1 Male sterility protein NAD_binding_10 PF13460.6 gi|568164245|ref|YP_008947709.1| - 5.2e-05 23.2 0.0 7.1e-05 22.8 0.0 1.4 1 1 0 1 1 1 1 NAD(P)H-binding adh_short PF00106.25 gi|568164245|ref|YP_008947709.1| - 0.014 14.9 0.7 0.18 11.2 0.7 2.5 1 1 0 1 1 1 0 short chain dehydrogenase RmlD_sub_bind PF04321.17 gi|568164246|ref|YP_008947710.1| - 5.6e-60 202.9 0.0 6.8e-60 202.6 0.0 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain Epimerase PF01370.21 gi|568164246|ref|YP_008947710.1| - 1.6e-11 44.2 0.0 2.2e-11 43.7 0.0 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|568164246|ref|YP_008947710.1| - 5.2e-07 29.4 0.1 5.2e-07 29.4 0.1 1.6 2 0 0 2 2 2 1 GDP-mannose 4,6 dehydratase Polysacc_synt_2 PF02719.15 gi|568164246|ref|YP_008947710.1| - 1.5e-06 27.6 1.6 6.2e-06 25.6 0.3 2.7 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein RNA_pol_Rpb2_2 PF04561.14 gi|568164246|ref|YP_008947710.1| - 0.096 12.3 0.0 0.16 11.6 0.0 1.3 1 0 0 1 1 1 0 RNA polymerase Rpb2, domain 2 dTDP_sugar_isom PF00908.17 gi|568164247|ref|YP_008947711.1| - 2e-55 187.0 0.0 2.3e-55 186.8 0.0 1.0 1 0 0 1 1 1 1 dTDP-4-dehydrorhamnose 3,5-epimerase Cupin_1 PF00190.22 gi|568164247|ref|YP_008947711.1| - 8.1e-05 22.3 0.0 0.00011 21.9 0.0 1.2 1 0 0 1 1 1 1 Cupin Cupin_4 PF08007.12 gi|568164247|ref|YP_008947711.1| - 0.1 12.0 0.0 0.15 11.5 0.0 1.2 1 0 0 1 1 1 0 Cupin superfamily protein SBP_bac_11 PF13531.6 gi|568164248|ref|YP_008947712.1| - 1.8e-26 93.3 0.2 2.6e-26 92.8 0.2 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|568164248|ref|YP_008947712.1| - 4.4e-10 40.0 6.5 6.5e-10 39.4 6.5 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein Pilin_N PF07790.11 gi|568164248|ref|YP_008947712.1| - 0.0046 17.8 1.2 0.0098 16.8 1.2 1.6 1 0 0 1 1 1 1 Archaeal Type IV pilin, N-terminal DUF3446 PF11928.8 gi|568164248|ref|YP_008947712.1| - 0.024 15.0 6.4 0.024 15.0 6.4 2.2 2 1 0 2 2 2 0 Early growth response N-terminal domain DUF2371 PF10177.9 gi|568164248|ref|YP_008947712.1| - 0.027 14.6 0.2 0.056 13.6 0.2 1.5 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2371) DUF4307 PF14155.6 gi|568164248|ref|YP_008947712.1| - 0.07 13.0 0.6 0.14 11.9 0.3 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4307) DUF5385 PF17359.2 gi|568164248|ref|YP_008947712.1| - 0.15 11.6 0.0 0.22 11.1 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5385) NVEALA PF14055.6 gi|568164248|ref|YP_008947712.1| - 0.15 12.0 1.9 3 7.9 0.2 2.5 2 0 0 2 2 2 0 NVEALA protein DUF2749 PF10907.8 gi|568164248|ref|YP_008947712.1| - 0.22 11.7 2.7 0.44 10.7 2.7 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2749) Pyr_redox_2 PF07992.14 gi|568164249|ref|YP_008947713.1| - 3.1e-55 187.5 0.2 4.2e-55 187.0 0.2 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|568164249|ref|YP_008947713.1| - 2.1e-29 102.0 0.1 4.1e-29 101.1 0.1 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox_3 PF13738.6 gi|568164249|ref|YP_008947713.1| - 1.7e-15 57.1 0.6 3.1e-15 56.2 0.6 1.4 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|568164249|ref|YP_008947713.1| - 3.2e-10 40.4 1.2 5.7e-10 39.6 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|568164249|ref|YP_008947713.1| - 9.3e-09 34.8 7.8 0.00013 21.2 1.4 4.5 4 1 0 4 4 4 3 Glucose inhibited division protein A HI0933_like PF03486.14 gi|568164249|ref|YP_008947713.1| - 0.00016 20.6 1.1 0.4 9.3 0.0 3.1 3 0 0 3 3 3 2 HI0933-like protein FAD_binding_2 PF00890.24 gi|568164249|ref|YP_008947713.1| - 0.0048 16.0 2.1 0.58 9.2 0.0 2.3 2 0 0 2 2 2 2 FAD binding domain K_oxygenase PF13434.6 gi|568164249|ref|YP_008947713.1| - 0.16 11.1 0.6 1.3 8.1 0.0 2.4 2 1 0 3 3 3 0 L-lysine 6-monooxygenase (NADPH-requiring) YHS PF04945.13 gi|568164250|ref|YP_008947714.1| - 2.4e-06 27.5 2.6 3.4e-06 27.1 2.6 1.2 1 0 0 1 1 1 1 YHS domain zf-FCS PF06467.14 gi|568164250|ref|YP_008947714.1| - 1.7e-05 24.6 4.5 2.4e-05 24.2 4.5 1.3 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif Arc_trans_TRASH PF08394.10 gi|568164250|ref|YP_008947714.1| - 1.9e-05 24.9 5.3 2.5e-05 24.5 5.3 1.2 1 0 0 1 1 1 1 Archaeal TRASH domain ATPase-cat_bd PF12156.8 gi|568164250|ref|YP_008947714.1| - 0.00039 21.1 5.6 0.00048 20.8 5.6 1.1 1 0 0 1 1 1 1 Putative metal-binding domain of cation transport ATPase Ta0938 PF11494.8 gi|568164250|ref|YP_008947714.1| - 0.00058 20.1 1.2 0.00066 19.9 1.2 1.1 1 0 0 1 1 1 1 Ta0938 Rhodanese_C PF12368.8 gi|568164250|ref|YP_008947714.1| - 0.0068 16.8 3.6 0.0073 16.7 3.6 1.1 1 0 0 1 1 1 1 Rhodanase C-terminal zinc_ribbon_15 PF17032.5 gi|568164250|ref|YP_008947714.1| - 0.024 15.4 5.2 0.029 15.1 5.2 1.2 1 0 0 1 1 1 0 zinc-ribbon family Metallothio_Pro PF02069.16 gi|568164250|ref|YP_008947714.1| - 0.026 14.8 5.9 0.064 13.5 5.9 1.7 1 1 0 1 1 1 0 Prokaryotic metallothionein DUF2175 PF09943.9 gi|568164250|ref|YP_008947714.1| - 0.065 13.5 3.9 0.073 13.4 3.9 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2175) PhnA_Zn_Ribbon PF08274.12 gi|568164250|ref|YP_008947714.1| - 0.075 13.0 8.4 1.1 9.3 8.4 2.1 1 1 0 1 1 1 0 PhnA Zinc-Ribbon zf-SNAP50_C PF12251.8 gi|568164250|ref|YP_008947714.1| - 0.077 12.7 5.4 0.078 12.6 5.4 1.0 1 0 0 1 1 1 0 snRNA-activating protein of 50kDa MW C terminal zf-C3HC4_3 PF13920.6 gi|568164250|ref|YP_008947714.1| - 0.094 12.6 5.2 0.42 10.5 5.0 1.9 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-H2C2_2 PF13465.6 gi|568164250|ref|YP_008947714.1| - 0.12 12.8 5.0 6.2 7.4 2.1 2.2 2 0 0 2 2 2 0 Zinc-finger double domain Evr1_Alr PF04777.13 gi|568164250|ref|YP_008947714.1| - 0.16 12.5 3.8 0.5 10.9 3.8 1.7 1 1 0 1 1 1 0 Erv1 / Alr family OrfB_Zn_ribbon PF07282.11 gi|568164250|ref|YP_008947714.1| - 0.39 10.7 5.3 1.5 8.8 0.2 1.9 1 1 1 2 2 2 0 Putative transposase DNA-binding domain HypA PF01155.19 gi|568164250|ref|YP_008947714.1| - 0.39 10.7 5.6 3.1 7.8 5.6 1.9 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn-ribbon_8 PF09723.10 gi|568164250|ref|YP_008947714.1| - 0.73 10.0 8.2 12 6.1 8.2 2.1 1 1 0 1 1 1 0 Zinc ribbon domain HTH_5 PF01022.20 gi|568164251|ref|YP_008947715.1| - 3.2e-16 58.9 0.6 5.1e-16 58.3 0.6 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|568164251|ref|YP_008947715.1| - 1.9e-09 37.4 0.0 2.9e-09 36.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|568164251|ref|YP_008947715.1| - 6.4e-07 29.2 0.0 1.1e-06 28.4 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|568164251|ref|YP_008947715.1| - 8.7e-06 25.2 0.1 1.7e-05 24.3 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_34 PF13601.6 gi|568164251|ref|YP_008947715.1| - 9e-06 25.8 0.0 1.4e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain TFIIE_alpha PF02002.17 gi|568164251|ref|YP_008947715.1| - 0.00056 19.7 0.5 0.0013 18.6 0.5 1.6 1 1 0 1 1 1 1 TFIIE alpha subunit Rrf2 PF02082.20 gi|568164251|ref|YP_008947715.1| - 0.0019 18.5 0.0 0.0027 18.0 0.0 1.2 1 0 0 1 1 1 1 Transcriptional regulator MarR_2 PF12802.7 gi|568164251|ref|YP_008947715.1| - 0.0019 18.0 0.0 0.003 17.4 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_38 PF13936.6 gi|568164251|ref|YP_008947715.1| - 0.0029 17.3 0.0 0.0073 16.1 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain DUF2551 PF10826.8 gi|568164251|ref|YP_008947715.1| - 0.0054 16.9 0.2 0.013 15.8 0.2 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF2551) HTH_11 PF08279.12 gi|568164251|ref|YP_008947715.1| - 0.0055 16.6 0.0 0.01 15.8 0.0 1.5 1 0 0 1 1 1 1 HTH domain HTH_9 PF08221.11 gi|568164251|ref|YP_008947715.1| - 0.006 16.7 0.6 0.011 15.8 0.6 1.4 1 0 0 1 1 1 1 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_23 PF13384.6 gi|568164251|ref|YP_008947715.1| - 0.012 15.4 0.0 0.021 14.6 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain Sigma70_r4 PF04545.16 gi|568164251|ref|YP_008947715.1| - 0.016 14.7 0.0 0.28 10.7 0.0 2.2 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_Tnp_Tc3_1 PF11427.8 gi|568164251|ref|YP_008947715.1| - 0.046 13.6 0.2 0.092 12.6 0.2 1.6 1 0 0 1 1 1 0 Tc3 transposase Phage_rep_org_N PF09681.10 gi|568164251|ref|YP_008947715.1| - 0.055 13.4 0.0 0.076 12.9 0.0 1.3 1 0 0 1 1 1 0 N-terminal phage replisome organiser (Phage_rep_org_N) HTH_40 PF14493.6 gi|568164251|ref|YP_008947715.1| - 0.092 13.2 0.1 0.15 12.6 0.1 1.4 1 1 0 1 1 1 0 Helix-turn-helix domain LexA_DNA_bind PF01726.16 gi|568164251|ref|YP_008947715.1| - 0.11 12.3 0.0 0.19 11.5 0.0 1.4 1 0 0 1 1 1 0 LexA DNA binding domain Phage_RpbA PF10789.9 gi|568164251|ref|YP_008947715.1| - 0.12 12.4 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 Phage RNA polymerase binding, RpbA HTH_IclR PF09339.10 gi|568164251|ref|YP_008947715.1| - 0.13 12.1 0.0 0.2 11.5 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain RRM_9 PF18444.1 gi|568164901|ref|YP_008947716.1| - 0.16 11.8 0.2 8 6.4 0.2 2.1 2 0 0 2 2 2 0 RNA recognition motif Acyl-CoA_dh_1 PF00441.24 gi|568164253|ref|YP_008947719.1| - 3.3e-31 108.5 0.0 4.6e-31 108.0 0.0 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|568164253|ref|YP_008947719.1| - 4.4e-18 65.3 0.0 7.2e-18 64.6 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|568164253|ref|YP_008947719.1| - 1.1e-10 41.9 0.0 1.7e-10 41.3 0.0 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|568164253|ref|YP_008947719.1| - 5.8e-08 33.4 0.0 1e-07 32.6 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Thermopsin PF05317.11 gi|568164254|ref|YP_008947720.1| - 2.5e-88 295.9 25.1 2.9e-88 295.7 25.1 1.1 1 0 0 1 1 1 1 Thermopsin ILVD_EDD PF00920.21 gi|568164255|ref|YP_008947721.1| - 3.1e-206 686.0 1.7 3.5e-206 685.8 1.7 1.0 1 0 0 1 1 1 1 Dehydratase family DHC_N1 PF08385.12 gi|568164256|ref|YP_008947722.1| - 0.016 13.9 0.2 0.017 13.8 0.2 1.0 1 0 0 1 1 1 0 Dynein heavy chain, N-terminal region 1 Rax2 PF12768.7 gi|568164903|ref|YP_008947723.1| - 0.11 11.9 0.0 0.13 11.7 0.0 1.1 1 0 0 1 1 1 0 Cortical protein marker for cell polarity LapA_dom PF06305.11 gi|568164903|ref|YP_008947723.1| - 0.12 12.2 0.2 0.15 11.9 0.2 1.1 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain DLH PF01738.18 gi|568164257|ref|YP_008947725.1| - 4.9e-69 232.2 0.0 1.2e-68 231.0 0.0 1.5 1 1 0 1 1 1 1 Dienelactone hydrolase family Hydrolase_4 PF12146.8 gi|568164257|ref|YP_008947725.1| - 8.2e-07 28.5 0.0 0.018 14.3 0.0 2.9 2 1 0 3 3 3 2 Serine aminopeptidase, S33 Abhydrolase_2 PF02230.16 gi|568164257|ref|YP_008947725.1| - 0.002 18.0 0.0 0.0031 17.3 0.0 1.2 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Abhydrolase_5 PF12695.7 gi|568164257|ref|YP_008947725.1| - 0.026 14.3 0.0 0.051 13.4 0.0 1.5 2 0 0 2 2 2 0 Alpha/beta hydrolase family Peptidase_S9 PF00326.21 gi|568164257|ref|YP_008947725.1| - 0.092 12.2 0.0 3 7.2 0.0 2.1 2 0 0 2 2 2 0 Prolyl oligopeptidase family Chlorophyllase PF07224.11 gi|568164257|ref|YP_008947725.1| - 0.11 11.5 0.0 0.31 10.0 0.0 1.6 2 0 0 2 2 2 0 Chlorophyllase BAAT_C PF08840.11 gi|568164257|ref|YP_008947725.1| - 0.16 11.8 0.1 15 5.4 0.0 2.4 2 0 0 2 2 2 0 BAAT / Acyl-CoA thioester hydrolase C terminal DUF72 PF01904.18 gi|568164259|ref|YP_008947727.1| - 4.2e-35 121.8 0.1 5.2e-35 121.5 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF72 RVT_3 PF13456.6 gi|568164260|ref|YP_008947728.1| - 1.3e-17 63.8 0.0 1.5e-17 63.6 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase-like RNase_H PF00075.24 gi|568164260|ref|YP_008947728.1| - 2.1e-05 24.7 0.0 3.9e-05 23.9 0.0 1.4 1 1 0 1 1 1 1 RNase H DUF1465 PF07323.12 gi|568164260|ref|YP_008947728.1| - 0.075 12.9 0.0 0.1 12.4 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1465) Flavin_Reduct PF01613.18 gi|568164261|ref|YP_008947729.1| - 1.4e-16 60.9 0.0 1.6e-16 60.7 0.0 1.0 1 0 0 1 1 1 1 Flavin reductase like domain Na_Ca_ex PF01699.24 gi|568164262|ref|YP_008947730.1| - 5.5e-27 94.6 37.6 9.8e-17 61.3 11.3 2.1 2 0 0 2 2 2 2 Sodium/calcium exchanger protein Peptidase_M61 PF05299.12 gi|568164263|ref|YP_008947731.1| - 2.6e-32 111.7 0.1 4.2e-32 111.0 0.1 1.3 1 0 0 1 1 1 1 M61 glycyl aminopeptidase Peptidase_M61_N PF17899.1 gi|568164263|ref|YP_008947731.1| - 4.5e-13 49.6 0.1 9.2e-12 45.3 0.2 2.6 2 1 0 2 2 2 1 Peptidase M61 N-terminal domain PDZ_6 PF17820.1 gi|568164263|ref|YP_008947731.1| - 7.7e-06 25.7 0.0 1.5e-05 24.7 0.0 1.5 1 0 0 1 1 1 1 PDZ domain PDZ_2 PF13180.6 gi|568164263|ref|YP_008947731.1| - 0.0021 18.3 0.3 0.058 13.7 0.3 2.6 1 1 0 1 1 1 1 PDZ domain Peptidase_M9 PF01752.17 gi|568164263|ref|YP_008947731.1| - 0.003 16.9 0.0 0.0062 15.8 0.0 1.4 1 0 0 1 1 1 1 Collagenase PDZ PF00595.24 gi|568164263|ref|YP_008947731.1| - 0.06 13.7 0.0 0.15 12.4 0.0 1.6 1 0 0 1 1 1 0 PDZ domain GRASP55_65 PF04495.14 gi|568164263|ref|YP_008947731.1| - 0.13 12.6 0.0 0.28 11.5 0.0 1.6 1 0 0 1 1 1 0 GRASP55/65 PDZ-like domain Sugar_tr PF00083.24 gi|568164264|ref|YP_008947732.1| - 3.4e-41 141.5 24.8 4.2e-41 141.3 24.8 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|568164264|ref|YP_008947732.1| - 3.1e-33 115.2 51.4 8.4e-27 94.0 35.9 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily PPR_1 PF12854.7 gi|568164264|ref|YP_008947732.1| - 0.064 13.0 0.2 0.15 11.8 0.2 1.6 1 0 0 1 1 1 0 PPR repeat PPR PF01535.20 gi|568164264|ref|YP_008947732.1| - 0.15 12.4 0.1 0.39 11.1 0.1 1.7 1 0 0 1 1 1 0 PPR repeat CoA_transf_3 PF02515.17 gi|568164265|ref|YP_008947734.1| - 3.9e-55 187.5 0.0 7.7e-55 186.5 0.0 1.4 1 1 0 1 1 1 1 CoA-transferase family III DUF1028 PF06267.12 gi|568164266|ref|YP_008947735.1| - 7.4e-69 231.4 0.0 9.4e-69 231.1 0.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF1028) PG_binding_2 PF08823.11 gi|568164266|ref|YP_008947735.1| - 1.6e-13 50.7 0.1 3.6e-13 49.6 0.1 1.6 1 0 0 1 1 1 1 Putative peptidoglycan binding domain Thiolase_N PF00108.23 gi|568164267|ref|YP_008947736.1| - 9.9e-27 93.9 0.0 2.9e-26 92.4 0.0 1.8 2 0 0 2 2 2 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|568164267|ref|YP_008947736.1| - 2.4e-06 27.2 0.1 4.9e-06 26.2 0.1 1.5 1 0 0 1 1 1 1 Thiolase, C-terminal domain ACP_syn_III PF08545.10 gi|568164267|ref|YP_008947736.1| - 8.5e-05 22.3 0.0 0.0029 17.4 0.1 2.4 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Ribosomal_L28e PF01778.17 gi|568164267|ref|YP_008947736.1| - 0.17 12.6 0.3 4.9 7.9 0.0 2.5 3 0 0 3 3 3 0 Ribosomal L28e protein family HypA PF01155.19 gi|568164268|ref|YP_008947737.1| - 2.7e-05 24.2 0.4 3.8e-05 23.7 0.4 1.2 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn_Tnp_IS1595 PF12760.7 gi|568164268|ref|YP_008947737.1| - 0.0017 18.3 2.0 0.071 13.1 0.1 2.4 2 0 0 2 2 2 1 Transposase zinc-ribbon domain NRDD PF13597.6 gi|568164268|ref|YP_008947737.1| - 0.0025 16.7 0.6 0.0026 16.6 0.6 1.0 1 0 0 1 1 1 1 Anaerobic ribonucleoside-triphosphate reductase DUF35_N PF12172.8 gi|568164268|ref|YP_008947737.1| - 0.0045 16.8 1.4 0.0094 15.8 1.4 1.6 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) TFIIS_C PF01096.18 gi|568164268|ref|YP_008947737.1| - 0.0046 16.8 2.6 1.9 8.4 0.1 2.7 2 0 0 2 2 2 2 Transcription factor S-II (TFIIS) zinc_ribbon_4 PF13717.6 gi|568164268|ref|YP_008947737.1| - 0.012 15.5 4.5 0.93 9.5 4.5 2.5 1 1 0 1 1 1 0 zinc-ribbon domain Rubredoxin_2 PF18073.1 gi|568164268|ref|YP_008947737.1| - 0.018 14.7 5.2 0.046 13.4 5.2 1.7 1 1 0 1 1 1 0 Rubredoxin metal binding domain Zn_ribbon_SprT PF17283.2 gi|568164268|ref|YP_008947737.1| - 0.019 14.8 2.1 0.055 13.4 2.1 1.8 1 0 0 1 1 1 0 SprT-like zinc ribbon domain TF_Zn_Ribbon PF08271.12 gi|568164268|ref|YP_008947737.1| - 0.025 14.1 1.4 2.4 7.8 0.1 2.5 2 0 0 2 2 2 0 TFIIB zinc-binding Zn-ribbon_8 PF09723.10 gi|568164268|ref|YP_008947737.1| - 0.027 14.6 5.1 0.078 13.1 5.1 1.8 1 1 0 1 1 1 0 Zinc ribbon domain Ribosomal_L37e PF01907.19 gi|568164268|ref|YP_008947737.1| - 0.031 14.4 2.1 0.056 13.6 2.1 1.5 1 0 0 1 1 1 0 Ribosomal protein L37e DZR PF12773.7 gi|568164268|ref|YP_008947737.1| - 0.037 14.1 2.3 0.037 14.1 2.3 1.8 2 0 0 2 2 2 0 Double zinc ribbon zf-LITAF-like PF10601.9 gi|568164268|ref|YP_008947737.1| - 0.051 13.8 1.6 0.11 12.8 0.0 2.2 1 1 1 2 2 2 0 LITAF-like zinc ribbon domain zf-C3HC4_3 PF13920.6 gi|568164268|ref|YP_008947737.1| - 0.083 12.8 3.0 0.098 12.5 1.4 1.9 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-ribbon_3 PF13248.6 gi|568164268|ref|YP_008947737.1| - 0.17 11.3 4.2 0.34 10.4 0.3 2.4 2 0 0 2 2 2 0 zinc-ribbon domain FdhE PF04216.12 gi|568164268|ref|YP_008947737.1| - 0.17 11.7 0.9 0.21 11.4 0.9 1.1 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation DNA_RNApol_7kD PF03604.13 gi|568164268|ref|YP_008947737.1| - 0.19 11.4 5.1 0.59 9.9 5.1 1.8 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit zinc_ribbon_13 PF09855.9 gi|568164268|ref|YP_008947737.1| - 0.22 11.7 4.1 5.2 7.3 0.1 2.3 2 0 0 2 2 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) zf-H2C2_2 PF13465.6 gi|568164268|ref|YP_008947737.1| - 0.22 12.0 2.7 3.2 8.3 0.3 2.5 2 0 0 2 2 2 0 Zinc-finger double domain zf_UBZ PF18439.1 gi|568164268|ref|YP_008947737.1| - 0.25 11.0 4.1 1.1 8.9 0.2 2.5 1 1 1 2 2 2 0 Ubiquitin-Binding Zinc Finger UPF0547 PF10571.9 gi|568164268|ref|YP_008947737.1| - 0.25 11.5 4.2 2.6 8.2 0.5 2.5 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zinc-ribbon_6 PF10005.9 gi|568164268|ref|YP_008947737.1| - 0.31 11.7 2.7 0.35 11.6 2.2 1.5 1 1 0 1 1 1 0 zinc-ribbon domain zf-C2H2 PF00096.26 gi|568164268|ref|YP_008947737.1| - 0.45 11.1 6.0 0.85 10.2 1.1 2.5 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-Mss51 PF13824.6 gi|568164268|ref|YP_008947737.1| - 0.75 9.9 3.3 9.5 6.4 0.2 2.2 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 A2L_zn_ribbon PF08792.10 gi|568164268|ref|YP_008947737.1| - 0.76 9.6 6.7 2.5 7.9 0.2 2.7 3 0 0 3 3 3 0 A2L zinc ribbon domain zf-RRN7 PF11781.8 gi|568164268|ref|YP_008947737.1| - 2 8.2 7.6 2.5 7.9 0.3 2.5 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 zf-C2H2_4 PF13894.6 gi|568164268|ref|YP_008947737.1| - 5.6 8.1 6.4 18 6.5 0.9 2.5 1 1 1 2 2 2 0 C2H2-type zinc finger zinc_ribbon_2 PF13240.6 gi|568164268|ref|YP_008947737.1| - 8.6 6.2 10.5 1.1 9.1 0.6 2.6 3 0 0 3 3 2 0 zinc-ribbon domain ADK_lid PF05191.14 gi|568164268|ref|YP_008947737.1| - 8.6 6.4 7.8 58 3.8 6.1 2.4 2 1 0 2 2 2 0 Adenylate kinase, active site lid DUF4352 PF11611.8 gi|568164906|ref|YP_008947738.1| - 4.4e-06 27.0 1.9 4.4e-06 27.0 1.9 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4352) Sugar_tr PF00083.24 gi|568164907|ref|YP_008947739.1| - 1.3e-20 73.7 14.9 1.3e-20 73.7 14.9 2.1 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.16 gi|568164907|ref|YP_008947739.1| - 5.2e-16 58.5 57.7 5.2e-16 58.5 57.7 1.7 1 1 0 1 1 1 1 Major Facilitator Superfamily DUF3094 PF11293.8 gi|568164907|ref|YP_008947739.1| - 0.076 12.7 1.2 0.55 10.0 1.2 2.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3094) Amino_oxidase PF01593.24 gi|568164269|ref|YP_008947740.1| - 2.1e-17 63.6 0.0 2.4e-16 60.1 0.0 2.0 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 gi|568164269|ref|YP_008947740.1| - 4.1e-13 49.3 0.0 8.3e-13 48.4 0.0 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|568164269|ref|YP_008947740.1| - 2.4e-12 47.1 0.2 2.6e-11 43.7 0.2 2.1 1 1 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|568164269|ref|YP_008947740.1| - 7e-08 32.1 0.2 5.4e-05 22.6 0.2 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|568164269|ref|YP_008947740.1| - 3.9e-07 29.5 0.1 1.9e-06 27.2 0.1 2.1 3 0 0 3 3 3 1 FAD binding domain Thi4 PF01946.17 gi|568164269|ref|YP_008947740.1| - 1.7e-05 24.2 0.2 2.5e-05 23.6 0.2 1.2 1 0 0 1 1 1 1 Thi4 family FAD_binding_3 PF01494.19 gi|568164269|ref|YP_008947740.1| - 3.2e-05 23.3 0.2 4.9e-05 22.7 0.2 1.2 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.14 gi|568164269|ref|YP_008947740.1| - 0.00015 20.6 0.0 0.015 14.0 0.3 2.1 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox_3 PF13738.6 gi|568164269|ref|YP_008947740.1| - 0.0008 18.8 0.7 0.0018 17.6 0.3 1.7 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|568164269|ref|YP_008947740.1| - 0.0012 18.3 0.0 0.0017 17.8 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase MCRA PF06100.11 gi|568164269|ref|YP_008947740.1| - 0.0034 16.2 0.0 0.0069 15.2 0.0 1.5 2 0 0 2 2 2 1 MCRA family Pyr_redox PF00070.27 gi|568164269|ref|YP_008947740.1| - 0.0056 17.2 0.8 0.13 12.8 0.3 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 gi|568164269|ref|YP_008947740.1| - 0.039 13.0 0.0 0.065 12.3 0.0 1.2 1 0 0 1 1 1 0 Lycopene cyclase protein UDPG_MGDP_dh_N PF03721.14 gi|568164269|ref|YP_008947740.1| - 0.039 13.5 0.3 0.12 11.9 0.3 1.8 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GIDA PF01134.22 gi|568164269|ref|YP_008947740.1| - 0.047 12.8 0.6 0.069 12.2 0.6 1.2 1 0 0 1 1 1 0 Glucose inhibited division protein A NAD_binding_9 PF13454.6 gi|568164269|ref|YP_008947740.1| - 0.093 12.7 0.0 0.17 11.8 0.0 1.4 1 0 0 1 1 1 0 FAD-NAD(P)-binding SQS_PSY PF00494.19 gi|568164271|ref|YP_008947742.1| - 4.8e-47 160.7 0.0 5.5e-47 160.5 0.0 1.0 1 0 0 1 1 1 1 Squalene/phytoene synthase Ubiq-assoc PF09145.10 gi|568164273|ref|YP_008947744.1| - 0.028 14.4 0.1 0.073 13.1 0.1 1.7 1 0 0 1 1 1 0 Ubiquitin-associated NTP_transferase PF00483.23 gi|568164273|ref|YP_008947744.1| - 0.03 13.9 0.0 0.049 13.2 0.0 1.2 1 0 0 1 1 1 0 Nucleotidyl transferase RnlB_antitoxin PF15933.5 gi|568164273|ref|YP_008947744.1| - 0.17 12.2 2.6 24 5.3 0.1 3.6 2 1 1 3 3 3 0 Antitoxin to bacterial toxin RNase LS or RnlA HCV_NS4a PF01006.20 gi|568164274|ref|YP_008947745.1| - 0.031 14.0 3.3 1.2 9.0 0.3 3.2 3 0 0 3 3 3 0 Hepatitis C virus non-structural protein NS4a DUF1533 PF07550.11 gi|568164274|ref|YP_008947745.1| - 0.11 12.4 2.9 0.43 10.5 0.9 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF1533) BetaGal_dom3 PF13363.6 gi|568164274|ref|YP_008947745.1| - 1 9.0 8.3 2.1 8.0 0.0 4.2 5 1 1 6 6 6 0 Beta-galactosidase, domain 3 PGF-CTERM PF18204.1 gi|568164274|ref|YP_008947745.1| - 4.8 7.3 6.0 9.2 6.4 6.0 1.5 1 0 0 1 1 1 0 PGF-CTERM motif Cu_amine_oxidN1 PF07833.11 gi|568164274|ref|YP_008947745.1| - 8.5 7.0 10.5 1.6 9.3 0.6 3.7 3 1 1 4 4 4 0 Copper amine oxidase N-terminal domain Aldedh PF00171.22 gi|568164275|ref|YP_008947746.1| - 6.8e-149 496.3 0.0 7.7e-149 496.1 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LPD23 PF18838.1 gi|568164275|ref|YP_008947746.1| - 0.16 11.7 0.0 0.38 10.6 0.0 1.6 1 0 0 1 1 1 0 Large polyvalent protein associated domain 23 Amidohydro_2 PF04909.14 gi|568164276|ref|YP_008947747.1| - 6.1e-48 164.1 0.2 7.2e-48 163.8 0.2 1.0 1 0 0 1 1 1 1 Amidohydrolase SprT-like PF10263.9 gi|568164277|ref|YP_008947748.1| - 0.07 13.0 0.0 0.079 12.8 0.0 1.3 1 0 0 1 1 1 0 SprT-like family Hjc PF01870.18 gi|568164278|ref|YP_008947749.1| - 1.2e-28 99.0 0.1 1.5e-28 98.6 0.1 1.1 1 0 0 1 1 1 1 Archaeal holliday junction resolvase (hjc) AHJR-like PF18743.1 gi|568164278|ref|YP_008947749.1| - 0.07 12.7 0.0 0.12 11.9 0.0 1.4 1 0 0 1 1 1 0 REase_AHJR-like Ald_Xan_dh_C2 PF02738.18 gi|568164279|ref|YP_008947750.1| - 9.2e-97 324.8 0.0 2.2e-96 323.5 0.0 1.6 2 0 0 2 2 2 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 gi|568164279|ref|YP_008947750.1| - 2.4e-21 76.1 0.0 5.6e-21 75.0 0.0 1.7 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TPP_enzyme_N PF02776.18 gi|568164280|ref|YP_008947751.1| - 2.2e-32 112.1 0.0 3.3e-32 111.5 0.0 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|568164280|ref|YP_008947751.1| - 3.7e-14 52.8 0.0 7e-14 51.9 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|568164280|ref|YP_008947751.1| - 5.2e-13 48.9 0.0 1e-12 47.9 0.0 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain PNTB PF02233.16 gi|568164280|ref|YP_008947751.1| - 0.24 10.3 0.0 1.4 7.7 0.0 1.9 2 0 0 2 2 2 0 NAD(P) transhydrogenase beta subunit DUF3311 PF11755.8 gi|568164281|ref|YP_008947752.1| - 4.6e-10 39.3 8.9 5.2e-10 39.1 8.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3311) DctQ PF04290.12 gi|568164281|ref|YP_008947752.1| - 0.012 15.5 6.5 0.014 15.3 6.5 1.1 1 0 0 1 1 1 0 Tripartite ATP-independent periplasmic transporters, DctQ component DUF485 PF04341.12 gi|568164281|ref|YP_008947752.1| - 0.044 13.7 8.9 0.049 13.6 8.9 1.0 1 0 0 1 1 1 0 Protein of unknown function, DUF485 DUF997 PF06196.12 gi|568164281|ref|YP_008947752.1| - 3.1 7.9 10.0 4.3 7.4 10.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF997) SSF PF00474.17 gi|568164282|ref|YP_008947753.1| - 1.3e-16 60.5 34.4 1.3e-16 60.5 34.4 1.8 2 0 0 2 2 2 1 Sodium:solute symporter family CoA_binding_3 PF13727.6 gi|568164283|ref|YP_008947754.1| - 0.64 10.0 8.7 0.31 11.0 0.6 2.9 2 1 0 2 2 2 0 CoA-binding domain SoxE PF06525.11 gi|568164284|ref|YP_008947755.1| - 2.2e-76 254.4 9.4 2.2e-76 254.4 9.4 1.5 2 0 0 2 2 2 1 Sulfocyanin (SoxE) domain NPCBM_assoc PF10633.9 gi|568164284|ref|YP_008947755.1| - 0.16 12.2 1.0 4.6 7.6 0.0 2.6 3 0 0 3 3 3 0 NPCBM-associated, NEW3 domain of alpha-galactosidase BRI3BP PF14965.6 gi|568164285|ref|YP_008947756.1| - 0.43 10.1 3.2 2.2 7.8 0.1 2.1 2 0 0 2 2 2 0 Negative regulator of p53/TP53 Band_7 PF01145.25 gi|568164286|ref|YP_008947757.1| - 1e-19 71.2 1.7 1.6e-19 70.6 1.7 1.3 1 0 0 1 1 1 1 SPFH domain / Band 7 family Band_7_1 PF13421.6 gi|568164286|ref|YP_008947757.1| - 6e-14 52.3 0.2 1.7e-13 50.8 0.2 1.6 1 1 0 1 1 1 1 SPFH domain-Band 7 family Tam41_Mmp37 PF09139.11 gi|568164908|ref|YP_008947759.1| - 0.016 14.7 0.1 0.016 14.6 0.1 1.0 1 0 0 1 1 1 0 Phosphatidate cytidylyltransferase, mitochondrial DUF4895 PF16236.5 gi|568164908|ref|YP_008947759.1| - 0.018 14.8 0.4 0.022 14.6 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4895) PRANC PF09372.10 gi|568164908|ref|YP_008947759.1| - 0.058 13.7 0.8 0.1 12.9 0.4 1.6 1 1 0 1 1 1 0 PRANC domain Tn7_Tnp_TnsA_C PF08721.11 gi|568164288|ref|YP_008947760.1| - 0.016 15.8 0.3 0.025 15.2 0.3 1.3 1 0 0 1 1 1 0 TnsA endonuclease C terminal Hemerythrin PF01814.23 gi|568164288|ref|YP_008947760.1| - 0.076 13.6 0.1 0.37 11.4 0.1 2.0 1 1 0 1 1 1 0 Hemerythrin HHE cation binding domain Gemini_mov PF01708.16 gi|568164289|ref|YP_008947761.1| - 0.0037 17.0 1.1 0.0058 16.4 1.1 1.2 1 0 0 1 1 1 1 Geminivirus putative movement protein LAB_N PF07578.11 gi|568164289|ref|YP_008947761.1| - 0.032 14.3 0.8 0.049 13.7 0.8 1.4 1 1 0 1 1 1 0 Lipid A Biosynthesis N-terminal domain Cellulose_synt PF03552.14 gi|568164289|ref|YP_008947761.1| - 0.14 10.7 3.8 0.16 10.4 3.8 1.0 1 0 0 1 1 1 0 Cellulose synthase SLAC1 PF03595.17 gi|568164909|ref|YP_008947763.1| - 7.8e-35 120.7 36.6 1.7e-34 119.5 36.7 1.4 1 1 0 1 1 1 1 Voltage-dependent anion channel UDG PF03167.19 gi|568164291|ref|YP_008947764.1| - 6.2e-33 114.0 0.0 7.4e-33 113.7 0.0 1.1 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily Planc_extracel PF07595.12 gi|568164291|ref|YP_008947764.1| - 0.046 13.5 0.4 0.092 12.6 0.4 1.5 1 0 0 1 1 1 0 Planctomycete extracellular Peptidase_M20 PF01546.28 gi|568164292|ref|YP_008947765.1| - 1.5e-35 122.8 0.0 2.7e-35 122.0 0.0 1.4 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|568164292|ref|YP_008947765.1| - 1.5e-19 70.0 0.0 2.8e-19 69.0 0.0 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain Coagulase PF08764.10 gi|568164292|ref|YP_008947765.1| - 0.0019 18.4 0.4 0.0035 17.6 0.4 1.4 1 0 0 1 1 1 1 Staphylococcus aureus coagulase DUF35_N PF12172.8 gi|568164293|ref|YP_008947766.1| - 1.4e-08 34.5 0.2 2e-08 34.0 0.2 1.2 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) OB_aCoA_assoc PF01796.17 gi|568164293|ref|YP_008947766.1| - 6.6e-05 22.8 0.1 0.00014 21.8 0.1 1.6 1 1 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated zinc_ribbon_5 PF13719.6 gi|568164293|ref|YP_008947766.1| - 0.011 15.4 1.0 0.43 10.4 0.1 2.8 3 0 0 3 3 3 0 zinc-ribbon domain FdhE PF04216.12 gi|568164293|ref|YP_008947766.1| - 0.018 14.9 0.1 0.023 14.6 0.1 1.1 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation zinc-ribbon_6 PF10005.9 gi|568164293|ref|YP_008947766.1| - 0.037 14.7 0.1 0.043 14.5 0.1 1.2 1 0 0 1 1 1 0 zinc-ribbon domain HypA PF01155.19 gi|568164293|ref|YP_008947766.1| - 0.041 13.9 0.1 0.056 13.5 0.1 1.2 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF5374 PF17344.2 gi|568164293|ref|YP_008947766.1| - 0.074 13.0 0.5 0.26 11.2 0.1 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5374) Thiolase_C PF02803.18 gi|568164294|ref|YP_008947767.1| - 7.3e-05 22.4 0.1 0.0016 18.1 0.0 2.3 2 0 0 2 2 2 1 Thiolase, C-terminal domain Thiolase_N PF00108.23 gi|568164294|ref|YP_008947767.1| - 0.0091 15.4 0.0 0.014 14.8 0.0 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain MazE_antitoxin PF04014.18 gi|568164295|ref|YP_008947768.1| - 5.7e-12 45.3 2.4 6.5e-12 45.1 1.6 1.5 1 1 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin PrlF_antitoxin PF15937.5 gi|568164295|ref|YP_008947768.1| - 6e-08 33.0 0.4 7.9e-08 32.6 0.4 1.1 1 0 0 1 1 1 1 prlF antitoxin for toxin YhaV_toxin DUF11 PF01345.18 gi|568164295|ref|YP_008947768.1| - 0.046 14.0 0.0 0.052 13.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function DUF11 DUF1905 PF08922.11 gi|568164295|ref|YP_008947768.1| - 0.063 13.4 0.0 0.093 12.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1905) Arc PF03869.14 gi|568164295|ref|YP_008947768.1| - 0.1 12.4 0.1 0.1 12.4 0.1 1.6 2 0 0 2 2 2 0 Arc-like DNA binding domain DUF104 PF01954.16 gi|568164295|ref|YP_008947768.1| - 0.13 12.7 6.2 0.2 12.1 6.1 1.5 1 1 0 1 1 1 0 Protein of unknown function DUF104 PIN PF01850.21 gi|568164296|ref|YP_008947769.1| - 2.3e-11 44.3 1.1 2.8e-11 44.0 1.1 1.0 1 0 0 1 1 1 1 PIN domain FAA_hydrolase PF01557.18 gi|568164297|ref|YP_008947770.1| - 2.1e-70 236.8 0.0 2.5e-70 236.5 0.0 1.1 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family Methyltransf_11 PF08241.12 gi|568164298|ref|YP_008947771.1| - 3.5e-17 62.8 0.0 4.4e-17 62.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|568164298|ref|YP_008947771.1| - 5.6e-17 62.0 0.0 5.9e-17 61.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|568164298|ref|YP_008947771.1| - 3.8e-15 56.4 0.0 4.8e-15 56.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|568164298|ref|YP_008947771.1| - 2.9e-09 37.6 0.0 3.7e-09 37.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|568164298|ref|YP_008947771.1| - 3.2e-09 36.5 0.0 3.4e-09 36.4 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|568164298|ref|YP_008947771.1| - 4.3e-09 36.4 0.0 4.7e-09 36.3 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|568164298|ref|YP_008947771.1| - 7.2e-06 25.9 0.0 9.7e-06 25.5 0.0 1.3 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MTS PF05175.14 gi|568164298|ref|YP_008947771.1| - 2.1e-05 24.2 0.0 3.9e-05 23.3 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase small domain Methyltr_RsmB-F PF01189.17 gi|568164298|ref|YP_008947771.1| - 2.5e-05 24.0 0.0 0.00051 19.7 0.0 1.9 1 1 1 2 2 2 1 16S rRNA methyltransferase RsmB/F PrmA PF06325.13 gi|568164298|ref|YP_008947771.1| - 7.1e-05 22.3 0.0 9e-05 22.0 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) TehB PF03848.14 gi|568164298|ref|YP_008947771.1| - 0.00071 19.0 0.0 0.0008 18.9 0.0 1.1 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_32 PF13679.6 gi|568164298|ref|YP_008947771.1| - 0.00098 19.1 0.0 0.0012 18.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain GCD14 PF08704.10 gi|568164298|ref|YP_008947771.1| - 0.0021 17.8 0.0 0.0028 17.4 0.0 1.2 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit FtsJ PF01728.19 gi|568164298|ref|YP_008947771.1| - 0.0029 17.7 0.0 0.0047 17.1 0.0 1.6 1 1 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_4 PF02390.17 gi|568164298|ref|YP_008947771.1| - 0.0055 16.2 0.0 0.081 12.4 0.0 2.0 2 0 0 2 2 2 1 Putative methyltransferase MetW PF07021.12 gi|568164298|ref|YP_008947771.1| - 0.014 15.0 0.0 0.018 14.7 0.0 1.1 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW CMAS PF02353.20 gi|568164298|ref|YP_008947771.1| - 0.027 13.8 0.0 0.027 13.7 0.0 1.1 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase N6_N4_Mtase PF01555.18 gi|568164298|ref|YP_008947771.1| - 0.054 13.2 0.0 0.1 12.3 0.0 1.4 2 0 0 2 2 2 0 DNA methylase Methyltransf_8 PF05148.15 gi|568164298|ref|YP_008947771.1| - 0.061 13.2 0.1 0.13 12.1 0.1 1.7 1 1 0 1 1 1 0 Hypothetical methyltransferase Methyltransf_29 PF03141.16 gi|568164298|ref|YP_008947771.1| - 0.065 11.8 0.0 0.079 11.5 0.0 1.0 1 0 0 1 1 1 0 Putative S-adenosyl-L-methionine-dependent methyltransferase Met_10 PF02475.16 gi|568164298|ref|YP_008947771.1| - 0.15 11.8 0.0 0.17 11.6 0.0 1.1 1 0 0 1 1 1 0 Met-10+ like-protein GidB PF02527.15 gi|568164298|ref|YP_008947771.1| - 0.15 11.4 0.0 0.17 11.2 0.0 1.1 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G Fibrillarin PF01269.17 gi|568164298|ref|YP_008947771.1| - 0.17 11.0 0.0 0.21 10.7 0.0 1.2 1 0 0 1 1 1 0 Fibrillarin Phosphoesterase PF04185.14 gi|568164299|ref|YP_008947772.1| - 1e-72 245.3 0.2 1.3e-72 244.9 0.2 1.1 1 0 0 1 1 1 1 Phosphoesterase family PaaA_PaaC PF05138.12 gi|568164300|ref|YP_008947773.1| - 6.7e-21 74.6 0.0 8.3e-21 74.3 0.0 1.0 1 0 0 1 1 1 1 Phenylacetic acid catabolic protein PaaA_PaaC PF05138.12 gi|568164301|ref|YP_008947774.1| - 1.5e-29 103.0 0.0 1.9e-29 102.6 0.0 1.0 1 0 0 1 1 1 1 Phenylacetic acid catabolic protein DS PF01916.17 gi|568164301|ref|YP_008947774.1| - 0.25 10.6 0.0 0.42 9.8 0.0 1.3 1 0 0 1 1 1 0 Deoxyhypusine synthase ECH_1 PF00378.20 gi|568164302|ref|YP_008947775.1| - 1.6e-54 184.9 0.0 1.8e-54 184.7 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|568164302|ref|YP_008947775.1| - 5.4e-30 105.0 0.0 3.2e-28 99.2 0.0 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase AAA_14 PF13173.6 gi|568164303|ref|YP_008947776.1| - 5.4e-22 78.2 0.1 1.7e-21 76.7 0.0 1.9 2 1 0 2 2 2 1 AAA domain DUF4143 PF13635.6 gi|568164303|ref|YP_008947776.1| - 1.8e-06 28.1 0.0 2.9e-06 27.4 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4143) AAA_24 PF13479.6 gi|568164303|ref|YP_008947776.1| - 0.0043 16.8 0.0 0.034 13.9 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA PF00004.29 gi|568164303|ref|YP_008947776.1| - 0.11 12.9 0.0 0.25 11.8 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) FtsK_SpoIIIE PF01580.18 gi|568164303|ref|YP_008947776.1| - 0.17 11.2 0.0 0.27 10.5 0.0 1.2 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_22 PF13401.6 gi|568164303|ref|YP_008947776.1| - 0.19 12.0 0.0 0.39 11.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain AMP-binding PF00501.28 gi|568164304|ref|YP_008947777.1| - 8.6e-84 281.6 0.0 1.1e-83 281.3 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|568164304|ref|YP_008947777.1| - 2.9e-23 82.6 1.1 6.2e-23 81.6 1.1 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain PaaX_C PF08223.11 gi|568164305|ref|YP_008947778.1| - 1.1e-32 112.2 0.2 1.9e-32 111.5 0.2 1.4 1 0 0 1 1 1 1 PaaX-like protein C-terminal domain PaaX PF07848.12 gi|568164305|ref|YP_008947778.1| - 3.8e-16 59.1 0.1 6.2e-16 58.4 0.1 1.3 1 0 0 1 1 1 1 PaaX-like protein LexA_DNA_bind PF01726.16 gi|568164305|ref|YP_008947778.1| - 0.0068 16.2 0.0 0.028 14.2 0.0 1.9 2 0 0 2 2 2 1 LexA DNA binding domain LZ3wCH PF18517.1 gi|568164305|ref|YP_008947778.1| - 0.026 14.6 0.8 0.062 13.4 0.4 1.8 2 0 0 2 2 2 0 Leucine zipper with capping helix domain CRISPR_Cas2 PF09827.9 gi|568164305|ref|YP_008947778.1| - 0.041 14.1 2.0 0.12 12.5 0.0 2.9 5 0 0 5 5 5 0 CRISPR associated protein Cas2 DUF4313 PF14190.6 gi|568164305|ref|YP_008947778.1| - 0.068 13.2 0.2 0.19 11.7 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4313) GntR PF00392.21 gi|568164305|ref|YP_008947778.1| - 0.13 12.0 0.0 0.7 9.6 0.0 2.1 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family LptF_LptG PF03739.14 gi|568164306|ref|YP_008947779.1| - 0.071 11.9 11.7 0.067 12.0 10.5 1.7 1 1 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG Caveolin PF01146.17 gi|568164306|ref|YP_008947779.1| - 1.5 8.8 10.0 5.2 7.0 9.5 2.2 1 1 1 2 2 2 0 Caveolin Penicil_amidase PF01804.18 gi|568164307|ref|YP_008947780.1| - 3e-155 518.9 0.0 3.7e-155 518.6 0.0 1.0 1 0 0 1 1 1 1 Penicillin amidase Acyl-CoA_dh_1 PF00441.24 gi|568164308|ref|YP_008947782.1| - 1.7e-38 132.2 0.0 2.5e-38 131.6 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|568164308|ref|YP_008947782.1| - 6.2e-15 55.2 0.0 1.1e-14 54.4 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|568164308|ref|YP_008947782.1| - 1e-07 32.3 0.0 1.8e-07 31.5 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain AidB_N PF18158.1 gi|568164308|ref|YP_008947782.1| - 2.3e-05 24.4 0.0 5.9e-05 23.1 0.0 1.6 1 0 0 1 1 1 1 Adaptive response protein AidB N-terminal domain AMP-binding PF00501.28 gi|568164309|ref|YP_008947783.1| - 4.5e-80 269.3 0.0 5.6e-80 269.0 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|568164309|ref|YP_008947783.1| - 1.3e-17 64.5 0.0 2.3e-17 63.7 0.0 1.4 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Peptidase_C15 PF01470.17 gi|568164310|ref|YP_008947784.1| - 1.3e-19 71.2 0.0 1.4e-19 71.1 0.0 1.0 1 0 0 1 1 1 1 Pyroglutamyl peptidase Amidohydro_1 PF01979.20 gi|568164311|ref|YP_008947786.1| - 8.5e-46 156.8 0.0 1e-45 156.6 0.0 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|568164311|ref|YP_008947786.1| - 5.7e-13 49.2 0.0 6e-09 35.9 0.0 2.3 2 0 0 2 2 2 2 Amidohydrolase family Sugar_tr PF00083.24 gi|568164312|ref|YP_008947787.1| - 5.2e-39 134.4 24.1 6.9e-39 134.0 24.1 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|568164312|ref|YP_008947787.1| - 3.5e-28 98.6 64.1 5.6e-24 84.7 46.6 3.5 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF485 PF04341.12 gi|568164312|ref|YP_008947787.1| - 0.0052 16.7 0.1 0.0052 16.7 0.1 3.9 3 1 1 4 4 4 1 Protein of unknown function, DUF485 OATP PF03137.20 gi|568164312|ref|YP_008947787.1| - 0.0094 14.3 14.1 0.033 12.5 3.0 2.9 1 1 0 2 2 2 2 Organic Anion Transporter Polypeptide (OATP) family Bac_export_2 PF01312.19 gi|568164312|ref|YP_008947787.1| - 0.13 11.4 1.1 0.28 10.3 0.4 2.0 1 1 0 1 1 1 0 FlhB HrpN YscU SpaS Family ABC2_membrane_2 PF12679.7 gi|568164912|ref|YP_008947788.1| - 6.7e-19 68.3 27.7 5.2e-18 65.3 27.7 2.1 1 1 0 1 1 1 1 ABC-2 family transporter protein CarboxypepD_reg PF13620.6 gi|568164912|ref|YP_008947788.1| - 2.2e-06 27.9 2.2 2.2e-06 27.9 2.2 2.7 2 1 0 2 2 2 1 Carboxypeptidase regulatory-like domain ABC2_membrane_5 PF13346.6 gi|568164912|ref|YP_008947788.1| - 6.5e-06 25.8 23.0 6.5e-06 25.8 23.0 3.2 3 1 0 3 3 3 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|568164912|ref|YP_008947788.1| - 5.4e-05 23.2 15.3 5.4e-05 23.2 15.3 2.8 2 2 1 3 3 3 1 ABC-2 family transporter protein CarbopepD_reg_2 PF13715.6 gi|568164912|ref|YP_008947788.1| - 0.019 14.9 2.3 3.8 7.6 1.1 2.8 2 0 0 2 2 2 0 CarboxypepD_reg-like domain ABC2_membrane_3 PF12698.7 gi|568164912|ref|YP_008947788.1| - 0.29 10.2 45.2 1.2 8.1 44.5 2.1 1 1 0 1 1 1 0 ABC-2 family transporter protein Big_1 PF02369.16 gi|568164912|ref|YP_008947788.1| - 7.4 6.7 12.9 0.27 11.3 4.0 3.1 1 1 1 2 2 2 0 Bacterial Ig-like domain (group 1) Radical_SAM PF04055.21 gi|568164914|ref|YP_008947790.1| - 2e-05 25.1 0.0 2.5e-05 24.7 0.0 1.1 1 0 0 1 1 1 1 Radical SAM superfamily OrfB_Zn_ribbon PF07282.11 gi|568164313|ref|YP_008947791.1| - 2.4e-19 69.0 1.6 4.5e-18 64.9 0.3 2.5 2 0 0 2 2 2 1 Putative transposase DNA-binding domain OrfB_IS605 PF01385.19 gi|568164313|ref|YP_008947791.1| - 0.0011 19.1 0.3 0.0087 16.3 0.1 2.0 2 0 0 2 2 2 1 Probable transposase DUF1351 PF07083.11 gi|568164313|ref|YP_008947791.1| - 0.067 13.0 0.5 13 5.5 0.2 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF1351) C1_1 PF00130.22 gi|568164313|ref|YP_008947791.1| - 0.12 12.3 0.5 0.23 11.4 0.5 1.4 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Zn_Tnp_IS1595 PF12760.7 gi|568164313|ref|YP_008947791.1| - 0.3 11.1 3.3 0.57 10.2 3.3 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain DUF643 PF04867.12 gi|568164313|ref|YP_008947791.1| - 0.93 10.1 4.1 2 9.0 1.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF643) DUF2633 PF11119.8 gi|568164314|ref|YP_008947793.1| - 0.024 14.5 0.1 0.05 13.5 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2633) DUF2678 PF10856.8 gi|568164314|ref|YP_008947793.1| - 0.28 11.1 7.2 0.061 13.3 3.5 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2678) PGG PF13962.6 gi|568164314|ref|YP_008947793.1| - 1.5 8.7 11.3 0.051 13.4 4.2 1.8 2 0 0 2 2 2 0 Domain of unknown function HTH_5 PF01022.20 gi|568164315|ref|YP_008947794.1| - 1.4e-09 37.6 0.7 1.7e-09 37.4 0.1 1.5 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.6 gi|568164315|ref|YP_008947794.1| - 0.00067 19.6 0.7 0.0013 18.7 0.6 1.5 1 1 0 1 1 1 1 Winged helix-turn-helix TrmB PF01978.19 gi|568164315|ref|YP_008947794.1| - 0.0013 18.6 0.0 0.0025 17.7 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.12 gi|568164315|ref|YP_008947794.1| - 0.0024 17.8 0.3 0.0056 16.6 0.0 1.7 2 0 0 2 2 2 1 HTH domain HTH_40 PF14493.6 gi|568164315|ref|YP_008947794.1| - 0.0032 17.9 0.3 0.0043 17.5 0.0 1.5 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_20 PF12840.7 gi|568164315|ref|YP_008947794.1| - 0.0043 17.1 0.0 0.007 16.4 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|568164315|ref|YP_008947794.1| - 0.0093 15.5 1.6 0.01 15.4 0.1 1.9 2 1 0 2 2 2 1 Winged helix-turn-helix DNA-binding GerE PF00196.19 gi|568164315|ref|YP_008947794.1| - 0.013 15.1 0.2 0.021 14.4 0.2 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_28 PF13518.6 gi|568164315|ref|YP_008947794.1| - 0.053 13.7 0.0 0.1 12.7 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain TnsD PF15978.5 gi|568164315|ref|YP_008947794.1| - 0.095 11.7 0.1 0.1 11.6 0.1 1.1 1 0 0 1 1 1 0 Tn7-like transposition protein D MFS_1 PF07690.16 gi|568164317|ref|YP_008947796.1| - 1.8e-28 99.5 43.3 2.5e-23 82.6 23.7 2.5 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|568164317|ref|YP_008947796.1| - 8.8e-06 24.8 9.0 0.00098 18.1 7.1 2.4 1 1 0 1 1 1 1 MFS_1 like family Sugar_tr PF00083.24 gi|568164317|ref|YP_008947796.1| - 1.6e-05 24.0 6.5 1.6e-05 24.0 6.5 1.8 2 1 0 2 2 2 1 Sugar (and other) transporter MFS_3 PF05977.13 gi|568164317|ref|YP_008947796.1| - 0.00011 20.8 1.9 0.00016 20.2 1.9 1.2 1 0 0 1 1 1 1 Transmembrane secretion effector LacY_symp PF01306.19 gi|568164317|ref|YP_008947796.1| - 0.00023 20.0 19.9 0.027 13.3 1.5 2.8 2 1 1 3 3 3 2 LacY proton/sugar symporter PIN PF01850.21 gi|568164318|ref|YP_008947797.1| - 1e-09 38.9 0.3 1.2e-09 38.7 0.3 1.0 1 0 0 1 1 1 1 PIN domain RHH_1 PF01402.21 gi|568164319|ref|YP_008947798.1| - 0.25 11.3 0.5 0.25 11.3 0.5 2.7 3 0 0 3 3 3 0 Ribbon-helix-helix protein, copG family adh_short_C2 PF13561.6 gi|568164320|ref|YP_008947799.1| - 6.2e-65 219.0 0.0 7.5e-65 218.7 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|568164320|ref|YP_008947799.1| - 1.1e-52 178.3 0.0 1.5e-52 177.9 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|568164320|ref|YP_008947799.1| - 6.4e-09 36.0 0.0 1e-08 35.3 0.0 1.3 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 gi|568164320|ref|YP_008947799.1| - 1.5e-08 34.4 0.1 2.1e-07 30.6 0.1 2.0 1 1 0 1 1 1 1 Fungal family of unknown function (DUF1776) Epimerase PF01370.21 gi|568164320|ref|YP_008947799.1| - 0.001 18.6 0.0 0.0021 17.6 0.0 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family AAA_31 PF13614.6 gi|568164320|ref|YP_008947799.1| - 0.0017 18.3 0.1 0.043 13.7 0.0 2.5 2 1 0 2 2 2 1 AAA domain GDP_Man_Dehyd PF16363.5 gi|568164320|ref|YP_008947799.1| - 0.062 12.7 0.0 0.099 12.0 0.1 1.4 1 1 0 1 1 1 0 GDP-mannose 4,6 dehydratase 3HCDH_N PF02737.18 gi|568164320|ref|YP_008947799.1| - 0.069 13.0 0.0 0.16 11.9 0.0 1.6 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Glycoamylase PF10091.9 gi|568164320|ref|YP_008947799.1| - 0.072 12.6 0.0 2.8 7.4 0.0 2.2 2 0 0 2 2 2 0 Putative glucoamylase HTH_45 PF14947.6 gi|568164321|ref|YP_008947800.1| - 3.9e-17 62.0 4.0 4.7e-17 61.7 4.0 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix DUF4364 PF14277.6 gi|568164321|ref|YP_008947800.1| - 0.00057 19.7 0.4 0.00075 19.3 0.4 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4364) DUF4393 PF14337.6 gi|568164321|ref|YP_008947800.1| - 0.00073 19.4 0.7 0.00073 19.4 0.7 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4393) DUF4855 PF16147.5 gi|568164321|ref|YP_008947800.1| - 0.095 11.8 0.3 0.098 11.7 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4855) Ribosomal_S19e PF01090.19 gi|568164321|ref|YP_008947800.1| - 0.1 12.3 0.0 0.16 11.7 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein S19e HTH_Crp_2 PF13545.6 gi|568164321|ref|YP_008947800.1| - 0.11 12.4 0.0 0.15 12.1 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain DIM PF08194.12 gi|568164322|ref|YP_008947801.1| - 0.29 11.4 4.7 1.6 9.0 0.1 2.6 2 0 0 2 2 2 0 DIM protein Peptidase_S24 PF00717.23 gi|568164323|ref|YP_008947802.1| - 8.2e-05 22.5 0.4 0.00018 21.4 0.4 1.6 1 0 0 1 1 1 1 Peptidase S24-like DUF5305 PF17231.2 gi|568164324|ref|YP_008947804.1| - 2.3e-05 23.9 8.0 0.00054 19.4 8.0 2.2 1 1 0 1 1 1 1 Family of unknown function (DUF5305) HTH_45 PF14947.6 gi|568164917|ref|YP_008947805.1| - 0.0063 16.5 0.0 0.021 14.8 0.0 1.8 1 1 0 2 2 2 1 Winged helix-turn-helix DUF2721 PF11026.8 gi|568164918|ref|YP_008947806.1| - 0.009 15.9 0.2 0.013 15.4 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2721) Peptidase_M61 PF05299.12 gi|568164918|ref|YP_008947806.1| - 0.062 13.7 0.0 0.089 13.2 0.0 1.2 1 0 0 1 1 1 0 M61 glycyl aminopeptidase zf-CRD PF17979.1 gi|568164918|ref|YP_008947806.1| - 0.084 13.0 0.8 0.1 12.7 0.8 1.2 1 0 0 1 1 1 0 Cysteine rich domain with multizinc binding regions LysE PF01810.18 gi|568164325|ref|YP_008947807.1| - 0.027 13.9 8.5 0.13 11.7 8.5 2.2 1 1 0 1 1 1 0 LysE type translocator Phage_holin_3_6 PF07332.11 gi|568164325|ref|YP_008947807.1| - 1.2 9.2 13.5 0.25 11.4 0.5 3.2 2 1 1 3 3 3 0 Putative Actinobacterial Holin-X, holin superfamily III ABC_tran PF00005.27 gi|568164326|ref|YP_008947808.1| - 9.1e-29 100.7 0.0 1.5e-28 100.0 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|568164326|ref|YP_008947808.1| - 1.6e-15 57.7 2.6 1.4e-08 34.9 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|568164326|ref|YP_008947808.1| - 3e-05 23.7 0.3 9.9e-05 22.0 0.2 1.8 2 0 0 2 2 2 1 P-loop containing region of AAA domain Rad17 PF03215.15 gi|568164326|ref|YP_008947808.1| - 4.1e-05 23.6 0.0 7.1e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_15 PF13175.6 gi|568164326|ref|YP_008947808.1| - 0.00013 21.8 0.2 0.0056 16.4 0.4 2.4 1 1 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|568164326|ref|YP_008947808.1| - 0.00095 19.5 0.4 0.011 16.0 0.4 2.3 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 gi|568164326|ref|YP_008947808.1| - 0.0011 19.5 0.0 0.0021 18.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|568164326|ref|YP_008947808.1| - 0.0055 16.2 0.1 0.29 10.5 0.1 2.2 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_30 PF13604.6 gi|568164326|ref|YP_008947808.1| - 0.021 14.5 0.0 0.043 13.5 0.0 1.7 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|568164326|ref|YP_008947808.1| - 0.025 14.5 0.1 0.045 13.7 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase IstB_IS21 PF01695.17 gi|568164326|ref|YP_008947808.1| - 0.031 14.0 0.0 0.31 10.8 0.0 2.3 2 1 0 2 2 2 0 IstB-like ATP binding protein AAA_28 PF13521.6 gi|568164326|ref|YP_008947808.1| - 0.038 14.2 0.2 0.097 12.9 0.1 1.7 2 0 0 2 2 1 0 AAA domain AAA_18 PF13238.6 gi|568164326|ref|YP_008947808.1| - 0.054 14.0 0.0 0.14 12.7 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|568164326|ref|YP_008947808.1| - 0.055 13.8 0.0 0.1 13.0 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA PF00004.29 gi|568164326|ref|YP_008947808.1| - 0.068 13.6 0.1 0.18 12.2 0.1 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) TsaE PF02367.17 gi|568164326|ref|YP_008947808.1| - 0.098 12.7 0.1 0.21 11.6 0.1 1.6 1 1 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_24 PF13479.6 gi|568164326|ref|YP_008947808.1| - 0.14 11.9 0.2 0.28 10.9 0.1 1.6 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 gi|568164326|ref|YP_008947808.1| - 0.19 11.3 0.1 0.36 10.4 0.1 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain Mg_chelatase PF01078.21 gi|568164326|ref|YP_008947808.1| - 0.21 10.9 0.1 0.34 10.3 0.1 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI ABC2_membrane PF01061.24 gi|568164327|ref|YP_008947809.1| - 1.6e-15 57.1 26.6 3.1e-15 56.2 26.6 1.4 1 1 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|568164327|ref|YP_008947809.1| - 7.3e-05 22.0 27.1 7.3e-05 22.0 27.1 1.3 1 1 0 1 1 1 1 ABC-2 family transporter protein Romo1 PF10247.9 gi|568164327|ref|YP_008947809.1| - 0.073 13.4 2.6 0.29 11.5 0.1 2.7 2 0 0 2 2 2 0 Reactive mitochondrial oxygen species modulator 1 DUF3742 PF12553.8 gi|568164327|ref|YP_008947809.1| - 0.19 11.8 1.5 0.57 10.3 0.7 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3742) DUF520 PF04461.13 gi|568164328|ref|YP_008947810.1| - 0.039 14.1 1.1 0.058 13.5 1.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF520) Fer4_10 PF13237.6 gi|568164329|ref|YP_008947811.1| - 3.8e-06 26.9 6.5 6e-06 26.3 6.5 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|568164329|ref|YP_008947811.1| - 7.7e-05 23.2 6.9 7.7e-05 23.2 6.9 1.9 2 1 0 2 2 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|568164329|ref|YP_008947811.1| - 0.00016 21.6 10.0 0.021 14.9 0.7 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|568164329|ref|YP_008947811.1| - 0.0015 18.7 4.7 0.0015 18.7 4.7 1.7 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|568164329|ref|YP_008947811.1| - 0.0071 16.1 12.6 0.07 13.0 0.7 3.0 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_11 PF13247.6 gi|568164329|ref|YP_008947811.1| - 0.018 15.2 1.1 0.018 15.2 1.1 1.7 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|568164329|ref|YP_008947811.1| - 0.065 13.4 6.3 0.18 12.0 6.3 1.8 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|568164329|ref|YP_008947811.1| - 0.28 12.1 6.4 1.3 10.1 0.1 2.4 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain CCSMST1 PF15013.6 gi|568164329|ref|YP_008947811.1| - 0.33 11.2 3.0 7.5 6.8 0.2 3.6 3 0 0 3 3 3 0 CCSMST1 family Fer4_2 PF12797.7 gi|568164329|ref|YP_008947811.1| - 0.39 10.9 14.5 0.14 12.3 2.3 2.7 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_20 PF14691.6 gi|568164329|ref|YP_008947811.1| - 0.46 10.3 5.6 0.47 10.2 1.3 2.3 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_3 PF12798.7 gi|568164329|ref|YP_008947811.1| - 0.72 10.9 11.5 4 8.6 4.5 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|568164329|ref|YP_008947811.1| - 0.95 10.1 9.3 0.24 11.9 0.3 2.5 1 1 1 2 2 2 0 4Fe-4S dicluster domain AIM24 PF01987.17 gi|568164330|ref|YP_008947812.1| - 1.3e-52 178.5 1.4 1.5e-52 178.3 1.4 1.0 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 DUF2173 PF09941.9 gi|568164331|ref|YP_008947813.1| - 1.1e-37 128.5 0.5 1.2e-37 128.4 0.5 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2173) MS_channel PF00924.18 gi|568164332|ref|YP_008947815.1| - 4.9e-24 85.0 3.8 4.9e-24 85.0 3.8 1.5 2 0 0 2 2 2 1 Mechanosensitive ion channel DUF2975 PF11188.8 gi|568164332|ref|YP_008947815.1| - 0.049 13.5 11.8 0.47 10.3 4.4 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2975) Glycos_transf_1 PF00534.20 gi|568164334|ref|YP_008947817.1| - 4.3e-20 72.0 0.0 9.8e-20 70.8 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|568164334|ref|YP_008947817.1| - 4.9e-09 36.7 0.0 8.7e-09 35.9 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|568164334|ref|YP_008947817.1| - 0.0019 18.2 0.1 0.0087 16.1 0.1 2.0 1 1 0 1 1 1 1 Glycosyltransferase Family 4 GDP_Man_Dehyd PF16363.5 gi|568164920|ref|YP_008947818.1| - 3.6e-06 26.6 0.0 2.6e-05 23.8 0.0 1.9 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 gi|568164920|ref|YP_008947818.1| - 0.00082 18.9 0.0 0.0011 18.5 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family B PF02216.16 gi|568164921|ref|YP_008947819.1| - 0.089 12.8 0.0 0.22 11.5 0.0 1.6 2 0 0 2 2 2 0 B domain Glycos_transf_2 PF00535.26 gi|568164335|ref|YP_008947820.1| - 4.2e-18 65.7 0.1 6.2e-18 65.2 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|568164335|ref|YP_008947820.1| - 1.6e-11 44.5 0.0 3.9e-11 43.3 0.0 1.8 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_1 PF00534.20 gi|568164336|ref|YP_008947821.1| - 2.1e-17 63.2 0.0 3.9e-17 62.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|568164336|ref|YP_008947821.1| - 8.6e-15 55.3 0.0 1.4e-14 54.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|568164336|ref|YP_008947821.1| - 0.0011 19.3 0.0 0.0031 17.9 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Lactamase_B PF00753.27 gi|568164337|ref|YP_008947823.1| - 6.9e-27 94.7 0.1 8.7e-27 94.4 0.1 1.0 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|568164337|ref|YP_008947823.1| - 0.00034 20.2 0.0 0.00056 19.5 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 gi|568164337|ref|YP_008947823.1| - 0.012 15.0 0.0 0.031 13.7 0.0 1.6 2 0 0 2 2 2 0 Metallo-beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|568164337|ref|YP_008947823.1| - 0.13 12.2 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 Beta-lactamase superfamily domain UPF0113_N PF17833.1 gi|568164338|ref|YP_008947824.1| - 0.058 14.0 0.8 40 4.9 0.1 3.5 2 1 0 2 2 2 0 UPF0113 Pre-PUA domain CbiQ PF02361.16 gi|568164339|ref|YP_008947825.1| - 1.2e-19 70.8 13.7 1.2e-19 70.8 13.7 2.1 3 0 0 3 3 3 1 Cobalt transport protein ABC_tran PF00005.27 gi|568164340|ref|YP_008947826.1| - 9.1e-48 162.3 0.0 1.2e-22 80.9 0.0 2.2 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 gi|568164340|ref|YP_008947826.1| - 3.8e-17 63.1 0.2 6.7e-05 22.8 0.0 4.1 3 1 1 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|568164340|ref|YP_008947826.1| - 3.5e-11 43.0 3.0 5.7e-05 22.6 0.3 3.8 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|568164340|ref|YP_008947826.1| - 5.2e-11 43.4 0.2 6.9e-05 23.4 0.1 2.6 2 1 0 2 2 2 2 AAA domain AAA_29 PF13555.6 gi|568164340|ref|YP_008947826.1| - 9.2e-10 38.1 0.7 0.00011 21.8 0.1 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|568164340|ref|YP_008947826.1| - 2e-07 31.6 0.0 0.00045 20.6 0.0 2.4 2 0 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.6 gi|568164340|ref|YP_008947826.1| - 4.7e-07 30.1 0.8 0.094 13.0 0.0 3.3 2 1 0 2 2 2 2 AAA domain AAA_30 PF13604.6 gi|568164340|ref|YP_008947826.1| - 1.5e-06 28.1 0.4 0.014 15.1 0.1 2.7 2 1 0 2 2 2 2 AAA domain RsgA_GTPase PF03193.16 gi|568164340|ref|YP_008947826.1| - 2e-06 27.8 0.7 0.069 13.1 0.1 2.7 2 0 0 2 2 2 2 RsgA GTPase NTPase_1 PF03266.15 gi|568164340|ref|YP_008947826.1| - 7.9e-06 25.9 2.2 0.14 12.0 0.1 3.3 3 0 0 3 3 3 2 NTPase AAA_15 PF13175.6 gi|568164340|ref|YP_008947826.1| - 8.3e-06 25.7 0.3 0.00045 20.0 0.3 3.0 3 0 0 3 3 3 1 AAA ATPase domain AAA_25 PF13481.6 gi|568164340|ref|YP_008947826.1| - 1.4e-05 24.8 0.2 0.15 11.6 0.0 3.1 3 0 0 3 3 3 2 AAA domain NACHT PF05729.12 gi|568164340|ref|YP_008947826.1| - 5.8e-05 23.1 0.2 0.41 10.5 0.0 2.5 2 0 0 2 2 2 2 NACHT domain Mg_chelatase PF01078.21 gi|568164340|ref|YP_008947826.1| - 8.5e-05 22.0 0.3 0.01 15.2 0.0 2.4 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 gi|568164340|ref|YP_008947826.1| - 0.00014 21.6 0.2 0.49 10.1 0.0 3.2 3 0 0 3 3 3 1 IstB-like ATP binding protein MobB PF03205.14 gi|568164340|ref|YP_008947826.1| - 0.0002 21.2 0.8 0.079 12.9 0.1 3.1 3 0 0 3 3 3 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_18 PF13238.6 gi|568164340|ref|YP_008947826.1| - 0.00034 21.1 2.3 0.42 11.2 0.0 3.5 4 0 0 4 4 2 1 AAA domain MMR_HSR1 PF01926.23 gi|568164340|ref|YP_008947826.1| - 0.00061 19.9 1.5 1.7 8.7 0.0 3.1 3 0 0 3 3 3 2 50S ribosome-binding GTPase PduV-EutP PF10662.9 gi|568164340|ref|YP_008947826.1| - 0.00075 19.3 0.8 0.4 10.4 0.1 3.3 4 0 0 4 4 3 1 Ethanolamine utilisation - propanediol utilisation AAA_7 PF12775.7 gi|568164340|ref|YP_008947826.1| - 0.00093 18.8 3.1 0.27 10.7 0.1 3.2 3 0 0 3 3 3 1 P-loop containing dynein motor region AAA_24 PF13479.6 gi|568164340|ref|YP_008947826.1| - 0.0012 18.6 1.7 1.2 8.8 0.1 2.8 2 0 0 2 2 2 2 AAA domain FtsK_SpoIIIE PF01580.18 gi|568164340|ref|YP_008947826.1| - 0.0012 18.3 0.2 0.74 9.1 0.1 2.3 2 0 0 2 2 2 1 FtsK/SpoIIIE family T2SSE PF00437.20 gi|568164340|ref|YP_008947826.1| - 0.0016 17.6 0.9 0.68 8.9 0.2 2.6 2 0 0 2 2 2 1 Type II/IV secretion system protein RNA_helicase PF00910.22 gi|568164340|ref|YP_008947826.1| - 0.003 17.9 0.4 2 8.8 0.0 2.7 2 0 0 2 2 2 1 RNA helicase ATPase PF06745.13 gi|568164340|ref|YP_008947826.1| - 0.0034 16.8 0.5 0.26 10.6 0.1 2.7 3 0 0 3 3 2 1 KaiC AAA PF00004.29 gi|568164340|ref|YP_008947826.1| - 0.0041 17.5 0.3 0.36 11.2 0.0 2.9 3 0 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) AAA_27 PF13514.6 gi|568164340|ref|YP_008947826.1| - 0.0044 16.7 0.3 0.051 13.2 0.1 2.4 2 1 1 3 3 3 1 AAA domain TsaE PF02367.17 gi|568164340|ref|YP_008947826.1| - 0.0048 16.9 0.3 0.52 10.3 0.1 2.4 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_33 PF13671.6 gi|568164340|ref|YP_008947826.1| - 0.0052 17.0 0.1 2 8.6 0.0 2.5 2 0 0 2 2 2 1 AAA domain DLIC PF05783.11 gi|568164340|ref|YP_008947826.1| - 0.008 15.1 0.3 0.94 8.2 0.1 2.2 2 0 0 2 2 2 1 Dynein light intermediate chain (DLIC) SbcCD_C PF13558.6 gi|568164340|ref|YP_008947826.1| - 0.0082 16.4 0.2 0.52 10.6 0.1 3.2 2 2 0 2 2 2 1 Putative exonuclease SbcCD, C subunit DUF87 PF01935.17 gi|568164340|ref|YP_008947826.1| - 0.009 16.1 0.5 1.6 8.8 0.2 3.0 3 0 0 3 3 2 1 Helicase HerA, central domain PRK PF00485.18 gi|568164340|ref|YP_008947826.1| - 0.01 15.6 1.9 2 8.1 0.2 2.5 2 1 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family Rad17 PF03215.15 gi|568164340|ref|YP_008947826.1| - 0.011 15.7 0.9 2.9 7.8 0.0 2.9 3 0 0 3 3 3 0 Rad17 P-loop domain NB-ARC PF00931.22 gi|568164340|ref|YP_008947826.1| - 0.017 14.3 0.1 1.3 8.1 0.0 2.3 2 0 0 2 2 2 0 NB-ARC domain AAA_5 PF07728.14 gi|568164340|ref|YP_008947826.1| - 0.023 14.7 0.3 7.5 6.5 0.0 2.8 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) ATP-synt_ab PF00006.25 gi|568164340|ref|YP_008947826.1| - 0.028 14.1 0.0 1.9 8.1 0.0 2.3 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain Herpes_Helicase PF02689.14 gi|568164340|ref|YP_008947826.1| - 0.033 12.1 0.3 2.8 5.7 0.1 2.1 2 0 0 2 2 2 0 Helicase Zeta_toxin PF06414.12 gi|568164340|ref|YP_008947826.1| - 0.042 13.1 0.9 7.6 5.8 0.0 2.5 2 0 0 2 2 2 0 Zeta toxin ABC_ATPase PF09818.9 gi|568164340|ref|YP_008947826.1| - 0.052 12.3 2.8 2.1 7.1 0.1 3.1 3 0 0 3 3 3 0 Predicted ATPase of the ABC class ATP_bind_2 PF03668.15 gi|568164340|ref|YP_008947826.1| - 0.053 12.8 1.3 5.3 6.3 0.1 2.4 2 0 0 2 2 2 0 P-loop ATPase protein family ATP_bind_1 PF03029.17 gi|568164340|ref|YP_008947826.1| - 0.054 13.3 3.4 5 6.8 0.1 2.8 3 0 0 3 3 3 0 Conserved hypothetical ATP binding protein TniB PF05621.11 gi|568164340|ref|YP_008947826.1| - 0.067 12.6 1.0 17 4.7 0.0 3.3 4 0 0 4 4 4 0 Bacterial TniB protein DUF815 PF05673.13 gi|568164340|ref|YP_008947826.1| - 0.078 12.1 0.1 1.2 8.3 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF815) DUF2075 PF09848.9 gi|568164340|ref|YP_008947826.1| - 0.087 12.0 0.4 10 5.3 0.0 2.2 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) Sigma54_activat PF00158.26 gi|568164340|ref|YP_008947826.1| - 0.09 12.5 0.1 0.72 9.5 0.0 2.2 2 0 0 2 2 2 0 Sigma-54 interaction domain SRP54 PF00448.22 gi|568164340|ref|YP_008947826.1| - 0.11 12.1 3.1 0.23 11.1 0.4 2.4 3 0 0 3 3 2 0 SRP54-type protein, GTPase domain cobW PF02492.19 gi|568164340|ref|YP_008947826.1| - 0.12 12.0 1.4 10 5.6 0.1 2.5 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain APS_kinase PF01583.20 gi|568164340|ref|YP_008947826.1| - 0.12 12.2 1.0 1.8 8.4 0.1 2.4 2 0 0 2 2 2 0 Adenylylsulphate kinase AAA_28 PF13521.6 gi|568164340|ref|YP_008947826.1| - 0.13 12.5 5.4 0.74 10.0 0.2 2.4 2 0 0 2 2 2 0 AAA domain AAA_19 PF13245.6 gi|568164340|ref|YP_008947826.1| - 0.13 12.6 3.9 18 5.7 0.1 3.6 3 1 1 4 4 4 0 AAA domain CbiA PF01656.23 gi|568164340|ref|YP_008947826.1| - 1.4 9.0 5.3 5.2 7.1 0.9 2.8 2 0 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain PSK_trans_fac PF07704.11 gi|568164342|ref|YP_008947829.1| - 0.0042 17.8 0.6 0.17 12.6 0.1 2.0 1 1 1 2 2 2 1 Rv0623-like transcription factor LEM PF03020.15 gi|568164342|ref|YP_008947829.1| - 0.0058 16.2 0.0 0.018 14.6 0.0 1.8 2 0 0 2 2 2 1 LEM domain UvrB PF12344.8 gi|568164342|ref|YP_008947829.1| - 0.16 11.8 1.3 0.35 10.8 1.2 1.6 1 1 0 1 1 1 0 Ultra-violet resistance protein B PIN PF01850.21 gi|568164343|ref|YP_008947830.1| - 0.0007 20.1 0.8 0.0013 19.3 0.8 1.4 1 1 0 1 1 1 1 PIN domain DUF5443 PF17518.2 gi|568164343|ref|YP_008947830.1| - 0.031 13.3 0.3 0.033 13.2 0.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5443) PIN_4 PF13638.6 gi|568164343|ref|YP_008947830.1| - 0.08 13.2 0.1 0.094 13.0 0.1 1.2 1 0 0 1 1 1 0 PIN domain CMD PF02627.20 gi|568164344|ref|YP_008947831.1| - 4.2e-24 84.4 0.0 5.3e-24 84.1 0.0 1.1 1 0 0 1 1 1 1 Carboxymuconolactone decarboxylase family Glyco_hydro_15 PF00723.21 gi|568164346|ref|YP_008947833.1| - 1.9e-42 145.6 0.1 1.7e-38 132.5 0.0 2.9 1 1 1 2 2 2 2 Glycosyl hydrolases family 15 TPR_19 PF14559.6 gi|568164346|ref|YP_008947833.1| - 0.0012 19.3 0.0 0.0056 17.2 0.0 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 gi|568164346|ref|YP_008947833.1| - 0.004 17.3 0.0 0.016 15.4 0.0 1.9 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 gi|568164346|ref|YP_008947833.1| - 0.0061 16.6 0.8 0.037 14.1 0.1 2.5 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_4 PF07721.14 gi|568164346|ref|YP_008947833.1| - 0.0098 16.4 0.1 0.055 14.1 0.1 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat Glyco_hydro_125 PF06824.11 gi|568164346|ref|YP_008947833.1| - 0.022 13.7 0.0 1.8 7.3 0.0 2.3 2 0 0 2 2 2 0 Metal-independent alpha-mannosidase (GH125) ANAPC3 PF12895.7 gi|568164346|ref|YP_008947833.1| - 0.031 14.5 0.0 0.13 12.5 0.0 1.9 1 1 1 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 gi|568164346|ref|YP_008947833.1| - 0.031 14.9 0.1 0.082 13.6 0.1 1.8 1 0 0 1 1 1 0 Tetratricopeptide repeat TPR_14 PF13428.6 gi|568164346|ref|YP_008947833.1| - 0.11 13.4 0.0 0.35 11.8 0.0 1.8 1 0 0 1 1 1 0 Tetratricopeptide repeat OFeT_1 PF16955.5 gi|568164347|ref|YP_008947834.1| - 1.9e-105 351.1 20.9 2.1e-105 350.9 20.9 1.0 1 0 0 1 1 1 1 Ferrous iron uptake permease, iron-lead transporter DUF2681 PF10883.8 gi|568164347|ref|YP_008947834.1| - 0.015 15.7 0.3 0.078 13.4 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2681) DUF3185 PF11381.8 gi|568164347|ref|YP_008947834.1| - 0.088 12.8 5.3 0.091 12.8 0.0 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF3185) Frizzled PF01534.17 gi|568164347|ref|YP_008947834.1| - 0.7 8.9 5.3 0.25 10.4 0.3 2.1 1 1 0 2 2 2 0 Frizzled/Smoothened family membrane region MFS_1 PF07690.16 gi|568164348|ref|YP_008947835.1| - 4.1e-22 78.6 50.7 6.8e-13 48.3 24.1 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily EamA PF00892.20 gi|568164349|ref|YP_008947836.1| - 3.5e-15 56.4 41.2 4.7e-12 46.3 17.5 2.4 2 1 0 2 2 2 2 EamA-like transporter family Nup84_Nup100 PF04121.13 gi|568164349|ref|YP_008947836.1| - 0.19 9.8 0.0 0.25 9.4 0.0 1.1 1 0 0 1 1 1 0 Nuclear pore protein 84 / 107 Nramp PF01566.18 gi|568164350|ref|YP_008947837.1| - 4.8e-31 108.0 18.3 6.4e-31 107.6 18.3 1.1 1 0 0 1 1 1 1 Natural resistance-associated macrophage protein Ferritin PF00210.24 gi|568164351|ref|YP_008947838.1| - 5.4e-24 84.7 0.4 7e-24 84.4 0.4 1.1 1 0 0 1 1 1 1 Ferritin-like domain Rubrerythrin PF02915.17 gi|568164351|ref|YP_008947838.1| - 0.032 14.6 0.4 0.062 13.7 0.4 1.5 1 1 0 1 1 1 0 Rubrerythrin DUF4439 PF14530.6 gi|568164351|ref|YP_008947838.1| - 0.041 14.6 0.1 1.4 9.6 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4439) COQ7 PF03232.13 gi|568164351|ref|YP_008947838.1| - 0.097 12.4 0.0 0.29 10.9 0.0 1.7 2 0 0 2 2 2 0 Ubiquinone biosynthesis protein COQ7 Ferritin_2 PF13668.6 gi|568164351|ref|YP_008947838.1| - 0.1 12.8 0.0 0.18 12.0 0.0 1.4 1 1 0 1 1 1 0 Ferritin-like domain Rieske PF00355.26 gi|568164352|ref|YP_008947839.1| - 5e-14 52.0 0.0 5.9e-14 51.8 0.0 1.1 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Thioredoxin PF00085.20 gi|568164353|ref|YP_008947840.1| - 8.9e-22 77.0 0.0 1.2e-21 76.7 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|568164353|ref|YP_008947840.1| - 6.9e-07 29.7 0.2 6e-05 23.4 0.1 2.4 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_3 PF13192.6 gi|568164353|ref|YP_008947840.1| - 0.0011 18.9 0.0 0.002 18.1 0.0 1.5 1 1 0 1 1 1 1 Thioredoxin domain Thioredoxin_9 PF14595.6 gi|568164353|ref|YP_008947840.1| - 0.002 17.9 0.0 0.0025 17.6 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin Redoxin PF08534.10 gi|568164353|ref|YP_008947840.1| - 0.0021 17.8 0.0 0.0039 16.9 0.0 1.4 1 1 0 1 1 1 1 Redoxin Thioredoxin_8 PF13905.6 gi|568164353|ref|YP_008947840.1| - 0.0022 18.3 0.0 0.022 15.1 0.0 2.3 1 1 2 3 3 3 1 Thioredoxin-like OST3_OST6 PF04756.13 gi|568164353|ref|YP_008947840.1| - 0.012 14.9 0.0 0.017 14.5 0.0 1.3 1 1 0 1 1 1 0 OST3 / OST6 family, transporter family AhpC-TSA PF00578.21 gi|568164353|ref|YP_008947840.1| - 0.022 14.7 0.0 0.12 12.3 0.0 1.9 1 1 1 2 2 2 0 AhpC/TSA family Endonuc_Holl PF10107.9 gi|568164924|ref|YP_008947841.1| - 7.7e-09 35.6 5.4 8e-09 35.5 5.4 1.0 1 0 0 1 1 1 1 Endonuclease related to archaeal Holliday junction resolvase DUF1244 PF06844.11 gi|568164924|ref|YP_008947841.1| - 0.021 15.0 1.6 0.022 14.9 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1244) Endonuc_Holl PF10107.9 gi|568164354|ref|YP_008947842.1| - 3.7e-28 98.4 0.7 4e-28 98.3 0.1 1.3 2 0 0 2 2 2 1 Endonuclease related to archaeal Holliday junction resolvase DUF4382 PF14321.6 gi|568164355|ref|YP_008947843.1| - 5.5e-11 42.9 0.0 6.5e-11 42.6 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4382) DUF5353 PF17304.2 gi|568164355|ref|YP_008947843.1| - 0.12 12.1 4.7 0.079 12.7 2.2 1.9 2 1 1 3 3 3 0 Family of unknown function (DUF5353) DUF2207 PF09972.9 gi|568164355|ref|YP_008947843.1| - 0.13 11.0 2.8 0.49 9.1 0.0 2.0 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) DUF4307 PF14155.6 gi|568164355|ref|YP_008947843.1| - 1.4 8.8 3.5 1.9 8.3 2.8 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4307) Glycos_transf_1 PF00534.20 gi|568164357|ref|YP_008947846.1| - 5.4e-23 81.4 0.0 9.4e-23 80.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|568164357|ref|YP_008947846.1| - 1.7e-08 35.0 0.0 2.4e-08 34.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|568164357|ref|YP_008947846.1| - 0.00073 19.9 0.0 0.0012 19.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 IL11 PF07400.11 gi|568164357|ref|YP_008947846.1| - 0.2 11.3 0.0 0.41 10.3 0.0 1.5 1 0 0 1 1 1 0 Interleukin 11 AA_permease PF00324.21 gi|568164358|ref|YP_008947847.1| - 1.2e-15 57.0 53.5 4.6e-15 55.2 53.5 1.9 1 1 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 gi|568164358|ref|YP_008947847.1| - 9.6e-14 51.0 56.9 1.2e-13 50.7 56.9 1.1 1 0 0 1 1 1 1 Amino acid permease PspB PF06667.12 gi|568164358|ref|YP_008947847.1| - 0.34 11.0 1.9 20 5.3 0.0 3.2 2 0 0 2 2 2 0 Phage shock protein B DUF2250 PF10007.9 gi|568164359|ref|YP_008947848.1| - 0.00018 21.5 0.2 0.00055 20.0 0.2 1.8 1 1 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) DUF2513 PF10711.9 gi|568164359|ref|YP_008947848.1| - 0.061 13.6 0.0 0.11 12.8 0.0 1.4 1 1 0 1 1 1 0 Hypothetical protein (DUF2513) Hydrolase_4 PF12146.8 gi|568164360|ref|YP_008947849.1| - 7.3e-15 54.9 0.0 1.9e-12 47.0 0.0 2.1 1 1 1 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 gi|568164360|ref|YP_008947849.1| - 2.6e-14 53.5 0.1 1.5e-12 47.8 0.1 2.0 1 1 1 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|568164360|ref|YP_008947849.1| - 2.2e-10 41.5 0.0 7.7e-10 39.8 0.0 1.5 1 1 1 2 2 2 1 Alpha/beta hydrolase family DUF1057 PF06342.12 gi|568164360|ref|YP_008947849.1| - 0.0041 16.2 0.0 0.0049 16.0 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF1057) Ndr PF03096.14 gi|568164360|ref|YP_008947849.1| - 0.0041 15.9 0.0 0.0062 15.3 0.0 1.2 1 0 0 1 1 1 1 Ndr family DUF2250 PF10007.9 gi|568164361|ref|YP_008947850.1| - 1e-69 230.7 15.7 2e-37 127.2 4.3 2.0 2 0 0 2 2 2 2 Uncharacterized protein conserved in archaea (DUF2250) DUF4423 PF14394.6 gi|568164361|ref|YP_008947850.1| - 1.6e-05 24.6 1.0 0.0018 18.0 0.1 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF4423) DUF3116 PF11313.8 gi|568164361|ref|YP_008947850.1| - 0.00038 20.2 1.6 1 9.3 0.1 3.0 2 1 1 3 3 3 2 Protein of unknown function (DUF3116) Phage_rep_org_N PF09681.10 gi|568164361|ref|YP_008947850.1| - 0.0018 18.2 0.9 0.62 10.0 0.1 2.3 1 1 1 2 2 2 2 N-terminal phage replisome organiser (Phage_rep_org_N) TrmB PF01978.19 gi|568164361|ref|YP_008947850.1| - 0.0019 18.0 1.0 0.052 13.4 0.0 3.1 2 1 1 3 3 3 1 Sugar-specific transcriptional regulator TrmB FUR PF01475.19 gi|568164361|ref|YP_008947850.1| - 0.038 14.2 0.4 0.099 12.8 0.1 1.9 2 0 0 2 2 2 0 Ferric uptake regulator family DUF501 PF04417.12 gi|568164361|ref|YP_008947850.1| - 0.041 13.7 1.8 6.6 6.5 0.1 2.6 1 1 2 3 3 3 0 Protein of unknown function (DUF501) Cdc6_C PF09079.11 gi|568164361|ref|YP_008947850.1| - 0.092 12.7 1.2 0.39 10.7 0.1 2.7 2 2 0 2 2 2 0 CDC6, C terminal winged helix domain HTH_27 PF13463.6 gi|568164361|ref|YP_008947850.1| - 0.2 12.2 8.7 0.58 10.7 0.2 3.6 4 0 0 4 4 4 0 Winged helix DNA-binding domain CxxCxxCC PF03692.15 gi|568164362|ref|YP_008947851.1| - 1e-06 29.3 0.4 1.7e-06 28.6 0.4 1.3 1 0 0 1 1 1 1 Putative zinc- or iron-chelating domain Sigma70_r3 PF04539.16 gi|568164362|ref|YP_008947851.1| - 0.015 15.4 0.2 0.03 14.4 0.2 1.5 1 0 0 1 1 1 0 Sigma-70 region 3 NleF_casp_inhib PF16809.5 gi|568164363|ref|YP_008947852.1| - 0.053 13.4 0.0 0.094 12.6 0.0 1.4 1 0 0 1 1 1 0 NleF caspase inhibitor DrsE PF02635.15 gi|568164364|ref|YP_008947853.1| - 0.0016 18.8 0.0 0.0021 18.4 0.0 1.2 1 0 0 1 1 1 1 DsrE/DsrF-like family DUF4141 PF13605.6 gi|568164364|ref|YP_008947853.1| - 0.17 11.1 0.0 0.28 10.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4141) MFS_1 PF07690.16 gi|568164365|ref|YP_008947854.1| - 4.4e-29 101.5 57.3 3.4e-17 62.4 29.3 2.8 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|568164365|ref|YP_008947854.1| - 5.2e-27 94.8 39.5 6.3e-19 68.2 13.9 2.0 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_2 PF13347.6 gi|568164365|ref|YP_008947854.1| - 1.2e-10 40.5 15.0 1.2e-10 40.5 15.0 2.5 2 1 0 2 2 2 2 MFS/sugar transport protein TNFR_16_TM PF18422.1 gi|568164365|ref|YP_008947854.1| - 0.024 14.6 0.4 0.024 14.6 0.4 2.6 3 0 0 3 3 3 0 Tumor necrosis factor receptor member 16 trans-membrane domain PsbI PF02532.14 gi|568164365|ref|YP_008947854.1| - 0.61 10.1 4.4 1.3 9.0 0.1 3.1 2 0 0 2 2 2 0 Photosystem II reaction centre I protein (PSII 4.8 kDa protein) OATP PF03137.20 gi|568164365|ref|YP_008947854.1| - 1 7.6 11.3 1.7 6.9 5.7 2.5 2 0 0 2 2 2 0 Organic Anion Transporter Polypeptide (OATP) family Amidohydro_1 PF01979.20 gi|568164366|ref|YP_008947855.1| - 9e-54 183.1 0.2 1.2e-53 182.7 0.2 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|568164366|ref|YP_008947855.1| - 3.8e-21 76.1 0.0 8.8e-13 48.5 0.0 2.1 2 0 0 2 2 2 2 Amidohydrolase family AP_endonuc_2 PF01261.24 gi|568164366|ref|YP_008947855.1| - 0.043 13.2 0.1 0.2 11.0 0.0 2.0 2 0 0 2 2 2 0 Xylose isomerase-like TIM barrel Urocanase_C PF17392.2 gi|568164366|ref|YP_008947855.1| - 0.14 11.6 0.8 0.46 9.9 0.3 2.1 3 0 0 3 3 3 0 Urocanase C-terminal domain Aminotran_1_2 PF00155.21 gi|568164367|ref|YP_008947856.1| - 7.7e-54 183.2 0.0 1.1e-53 182.8 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|568164367|ref|YP_008947856.1| - 1.6e-10 40.5 0.0 2.3e-10 40.0 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|568164367|ref|YP_008947856.1| - 5.9e-06 25.1 0.0 8.6e-06 24.5 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Alliinase_C PF04864.13 gi|568164367|ref|YP_008947856.1| - 1.2e-05 24.4 0.1 1.6e-05 24.0 0.1 1.2 1 0 0 1 1 1 1 Allinase Beta_elim_lyase PF01212.21 gi|568164367|ref|YP_008947856.1| - 8.9e-05 21.9 0.0 0.00015 21.1 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 gi|568164367|ref|YP_008947856.1| - 0.0012 18.2 0.0 0.0021 17.5 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Med23 PF11573.8 gi|568164367|ref|YP_008947856.1| - 0.021 12.5 0.0 0.022 12.4 0.0 1.1 1 0 0 1 1 1 0 Mediator complex subunit 23 PhdYeFM_antitox PF02604.19 gi|568164367|ref|YP_008947856.1| - 0.13 12.1 0.1 0.78 9.6 0.0 2.2 2 0 0 2 2 2 0 Antitoxin Phd_YefM, type II toxin-antitoxin system Ald_Xan_dh_C2 PF02738.18 gi|568164927|ref|YP_008947858.1| - 2.7e-24 85.5 7.0 1.2e-18 67.0 0.2 2.0 1 1 1 2 2 2 2 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 gi|568164928|ref|YP_008947859.1| - 1.3e-09 38.4 0.0 2e-09 37.8 0.0 1.3 1 1 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CitMHS PF03600.16 gi|568164368|ref|YP_008947860.1| - 1.1e-37 129.8 35.1 2.3e-36 125.5 17.0 2.0 1 1 1 2 2 2 2 Citrate transporter Na_sulph_symp PF00939.19 gi|568164368|ref|YP_008947860.1| - 7.2e-15 55.0 34.0 1.6e-10 40.7 12.2 2.4 2 1 0 2 2 2 2 Sodium:sulfate symporter transmembrane region TrkA_C PF02080.21 gi|568164368|ref|YP_008947860.1| - 1.4e-10 40.9 1.0 1.1e-06 28.3 0.1 2.8 2 0 0 2 2 2 2 TrkA-C domain Orai-1 PF07856.12 gi|568164368|ref|YP_008947860.1| - 0.099 12.3 1.7 0.16 11.6 0.0 2.2 2 0 0 2 2 2 0 Mediator of CRAC channel activity DsbD_2 PF13386.6 gi|568164369|ref|YP_008947861.1| - 0.032 14.2 6.6 0.042 13.8 6.6 1.2 1 0 0 1 1 1 0 Cytochrome C biogenesis protein transmembrane region NicO PF03824.16 gi|568164369|ref|YP_008947861.1| - 1.3 8.3 11.2 0.029 13.7 2.5 2.2 2 0 0 2 2 2 0 High-affinity nickel-transport protein ABC_tran PF00005.27 gi|568164931|ref|YP_008947864.1| - 6.8e-23 81.7 0.0 1.2e-22 80.9 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|568164931|ref|YP_008947864.1| - 2e-16 60.7 2.1 4.7e-08 33.2 0.4 2.7 2 1 1 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|568164931|ref|YP_008947864.1| - 7e-08 32.2 0.6 0.0036 16.8 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|568164931|ref|YP_008947864.1| - 1.5e-06 28.8 0.6 4e-06 27.5 0.1 1.9 3 0 0 3 3 3 1 AAA domain AAA_15 PF13175.6 gi|568164931|ref|YP_008947864.1| - 2.9e-06 27.2 1.0 0.0085 15.8 0.1 2.2 1 1 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.6 gi|568164931|ref|YP_008947864.1| - 4.7e-06 26.2 0.1 1.8e-05 24.4 0.0 1.9 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_27 PF13514.6 gi|568164931|ref|YP_008947864.1| - 0.00064 19.4 0.0 0.001 18.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_14 PF13173.6 gi|568164931|ref|YP_008947864.1| - 0.0011 18.9 0.3 0.079 13.0 0.1 3.0 1 1 1 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|568164931|ref|YP_008947864.1| - 0.0069 16.7 0.0 0.016 15.5 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 gi|568164931|ref|YP_008947864.1| - 0.007 16.0 0.0 0.01 15.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|568164931|ref|YP_008947864.1| - 0.019 14.9 0.1 0.05 13.5 0.0 1.7 2 0 0 2 2 2 0 RsgA GTPase ATPase_2 PF01637.18 gi|568164931|ref|YP_008947864.1| - 0.02 14.8 1.1 0.083 12.8 1.1 2.0 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea NB-ARC PF00931.22 gi|568164931|ref|YP_008947864.1| - 0.026 13.7 0.1 0.087 12.0 0.0 1.8 2 0 0 2 2 2 0 NB-ARC domain AAA_16 PF13191.6 gi|568164931|ref|YP_008947864.1| - 0.079 13.3 0.1 0.16 12.4 0.1 1.7 1 1 0 1 1 1 0 AAA ATPase domain NTPase_1 PF03266.15 gi|568164931|ref|YP_008947864.1| - 0.11 12.4 2.3 2.8 7.8 0.0 3.1 1 1 2 3 3 3 0 NTPase IstB_IS21 PF01695.17 gi|568164931|ref|YP_008947864.1| - 0.11 12.2 0.4 2.2 8.0 0.0 2.5 2 1 0 2 2 2 0 IstB-like ATP binding protein AAA_18 PF13238.6 gi|568164931|ref|YP_008947864.1| - 0.13 12.8 0.3 0.25 11.9 0.1 1.9 2 1 0 2 2 1 0 AAA domain NACHT PF05729.12 gi|568164931|ref|YP_008947864.1| - 0.13 12.1 0.0 0.25 11.2 0.0 1.4 1 0 0 1 1 1 0 NACHT domain MMR_HSR1 PF01926.23 gi|568164931|ref|YP_008947864.1| - 0.53 10.4 2.0 0.87 9.7 0.4 2.3 2 1 0 2 2 2 0 50S ribosome-binding GTPase Na_H_Exchanger PF00999.21 gi|568164370|ref|YP_008947866.1| - 9.6e-31 106.9 46.9 1.3e-30 106.5 46.9 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family CBS PF00571.28 gi|568164370|ref|YP_008947866.1| - 4.2e-15 55.9 2.9 1.1e-07 32.2 0.5 2.7 2 0 0 2 2 2 2 CBS domain Tfb5 PF06331.12 gi|568164370|ref|YP_008947866.1| - 0.033 14.2 0.0 0.07 13.1 0.0 1.5 1 0 0 1 1 1 0 Transcription factor TFIIH complex subunit Tfb5 HGTP_anticodon PF03129.20 gi|568164370|ref|YP_008947866.1| - 0.053 13.7 1.6 3.5 7.8 0.2 2.3 1 1 1 2 2 2 0 Anticodon binding domain PDDEXK_10 PF07788.11 gi|568164371|ref|YP_008947867.1| - 6.3e-31 106.1 5.3 6.3e-31 106.1 5.3 1.7 2 0 0 2 2 2 1 PD-(D/E)XK nuclease superfamily DUF3782 PF12644.7 gi|568164371|ref|YP_008947867.1| - 1e-21 76.9 0.2 2.8e-21 75.5 0.2 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF3782) DUF4143 PF13635.6 gi|568164371|ref|YP_008947867.1| - 0.02 15.1 0.4 0.3 11.2 0.1 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4143) ScsC_N PF18312.1 gi|568164371|ref|YP_008947867.1| - 0.32 10.8 0.2 0.32 10.8 0.2 2.5 3 0 0 3 3 3 0 Copper resistance protein ScsC N-terminal domain Thermopsin PF05317.11 gi|568164373|ref|YP_008947869.1| - 1.5e-76 257.3 23.6 1.5e-76 257.3 23.6 4.9 5 1 0 5 5 5 1 Thermopsin ETS_PEA3_N PF04621.13 gi|568164373|ref|YP_008947869.1| - 0.057 13.3 0.0 0.086 12.7 0.0 1.2 1 0 0 1 1 1 0 PEA3 subfamily ETS-domain transcription factor N terminal domain GATase_6 PF13522.6 gi|568164374|ref|YP_008947870.1| - 1.7e-08 34.7 0.0 2.6e-08 34.1 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_4 PF13230.6 gi|568164374|ref|YP_008947870.1| - 6.2e-06 25.3 0.0 9.3e-06 24.7 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferases class-II MFS_1 PF07690.16 gi|568164375|ref|YP_008947871.1| - 4.6e-24 85.0 46.1 4.6e-24 85.0 46.1 2.0 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|568164375|ref|YP_008947871.1| - 4.3e-19 68.7 38.9 3e-15 56.1 15.2 2.3 2 1 0 2 2 2 2 Sugar (and other) transporter Glyco_hydro_1 PF00232.18 gi|568164376|ref|YP_008947872.1| - 1.2e-63 215.1 6.8 8.6e-56 189.2 3.0 2.7 2 1 0 2 2 2 2 Glycosyl hydrolase family 1 Cellulase PF00150.18 gi|568164376|ref|YP_008947872.1| - 9.6e-05 21.9 0.5 0.0002 20.9 0.5 1.5 1 1 0 1 1 1 1 Cellulase (glycosyl hydrolase family 5) TMIE PF16038.5 gi|568164933|ref|YP_008947873.1| - 1.4 8.8 4.1 0.75 9.7 1.9 1.6 1 1 1 2 2 2 0 TMIE protein GntR PF00392.21 gi|568164377|ref|YP_008947876.1| - 1.5e-17 63.0 0.0 2.4e-17 62.3 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_41 PF14502.6 gi|568164377|ref|YP_008947876.1| - 5.2e-05 22.9 0.0 0.0014 18.3 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|568164377|ref|YP_008947876.1| - 7.2e-05 22.7 0.0 0.00013 21.9 0.0 1.5 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain TrmB PF01978.19 gi|568164377|ref|YP_008947876.1| - 0.0046 16.8 0.3 0.015 15.1 0.2 1.8 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB RPA_C PF08784.11 gi|568164377|ref|YP_008947876.1| - 0.032 14.9 0.1 0.067 13.9 0.0 1.5 2 0 0 2 2 2 0 Replication protein A C terminal DUF4423 PF14394.6 gi|568164377|ref|YP_008947876.1| - 0.047 13.4 0.0 0.16 11.7 0.0 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4423) Phage_tail_U PF06141.11 gi|568164377|ref|YP_008947876.1| - 0.052 13.9 0.1 0.1 12.9 0.0 1.5 2 0 0 2 2 2 0 Phage minor tail protein U Rrf2 PF02082.20 gi|568164377|ref|YP_008947876.1| - 0.08 13.3 0.0 0.15 12.5 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator MFS_1 PF07690.16 gi|568164378|ref|YP_008947877.1| - 3.5e-24 85.4 53.7 3.5e-24 85.4 53.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|568164378|ref|YP_008947877.1| - 4.7e-24 85.1 41.6 1.2e-19 70.5 14.4 2.0 1 1 1 2 2 2 2 Sugar (and other) transporter Glyco_hydro_12 PF01670.16 gi|568164379|ref|YP_008947878.1| - 7.2e-16 58.8 1.8 1.3e-15 58.0 1.8 1.4 1 1 0 1 1 1 1 Glycosyl hydrolase family 12 DUF4972 PF16342.5 gi|568164936|ref|YP_008947879.1| - 0.0027 17.4 0.1 0.0028 17.3 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4972) TrmO PF01980.16 gi|568164380|ref|YP_008947880.1| - 1.4e-32 112.4 0.0 1.8e-32 112.0 0.0 1.1 1 0 0 1 1 1 1 tRNA-methyltransferase O FAD_binding_4 PF01565.23 gi|568164381|ref|YP_008947884.1| - 3.2e-25 88.5 0.0 5.7e-25 87.7 0.0 1.4 1 0 0 1 1 1 1 FAD binding domain FAD-oxidase_C PF02913.19 gi|568164381|ref|YP_008947884.1| - 1.1e-05 25.2 0.0 4.1e-05 23.3 0.0 1.9 2 0 0 2 2 2 1 FAD linked oxidases, C-terminal domain DUF1177 PF06675.11 gi|568164382|ref|YP_008947885.1| - 9.7e-104 346.0 0.0 1.2e-103 345.6 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1177) Oscp1 PF10188.9 gi|568164382|ref|YP_008947885.1| - 0.13 12.4 0.0 0.27 11.4 0.0 1.5 1 0 0 1 1 1 0 Organic solute transport protein 1 Cas_DxTHG PF09455.10 gi|568164940|ref|YP_008947886.1| - 0.0006 19.5 0.0 0.00064 19.4 0.0 1.0 1 0 0 1 1 1 1 CRISPR-associated (Cas) DxTHG family DUF4459 PF14673.6 gi|568164940|ref|YP_008947886.1| - 0.074 13.0 0.0 0.084 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4459) DUF16 PF01519.16 gi|568164383|ref|YP_008947889.1| - 2.5e-05 24.7 11.2 0.012 16.0 2.7 2.6 1 1 1 2 2 2 2 Protein of unknown function DUF16 DUF3782 PF12644.7 gi|568164383|ref|YP_008947889.1| - 0.00014 21.9 5.6 0.00052 20.1 0.1 3.1 1 1 2 3 3 3 1 Protein of unknown function (DUF3782) TPR_MLP1_2 PF07926.12 gi|568164383|ref|YP_008947889.1| - 0.00024 21.2 3.7 0.00042 20.4 3.7 1.4 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein MCPsignal PF00015.21 gi|568164383|ref|YP_008947889.1| - 0.00031 20.6 3.8 0.00056 19.8 3.8 1.6 1 0 0 1 1 1 1 Methyl-accepting chemotaxis protein (MCP) signalling domain Lebercilin PF15619.6 gi|568164383|ref|YP_008947889.1| - 0.00046 19.9 5.0 0.00076 19.2 5.0 1.3 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease FliJ PF02050.16 gi|568164383|ref|YP_008947889.1| - 0.00047 20.4 7.7 0.02 15.1 1.4 2.3 1 1 1 2 2 2 2 Flagellar FliJ protein Exonuc_VII_L PF02601.15 gi|568164383|ref|YP_008947889.1| - 0.0005 19.7 0.5 0.00061 19.5 0.5 1.1 1 0 0 1 1 1 1 Exonuclease VII, large subunit CALCOCO1 PF07888.11 gi|568164383|ref|YP_008947889.1| - 0.00087 18.3 8.2 0.001 18.0 8.2 1.1 1 0 0 1 1 1 1 Calcium binding and coiled-coil domain (CALCOCO1) like Bacillus_HBL PF05791.11 gi|568164383|ref|YP_008947889.1| - 0.00088 19.1 6.2 0.0015 18.4 5.7 1.6 1 1 0 1 1 1 1 Bacillus haemolytic enterotoxin (HBL) Spc7 PF08317.11 gi|568164383|ref|YP_008947889.1| - 0.0009 18.2 7.3 0.0012 17.8 7.3 1.1 1 0 0 1 1 1 1 Spc7 kinetochore protein DUF1664 PF07889.12 gi|568164383|ref|YP_008947889.1| - 0.0017 18.4 7.4 0.0078 16.3 4.3 2.3 1 1 1 2 2 2 2 Protein of unknown function (DUF1664) Fib_alpha PF08702.10 gi|568164383|ref|YP_008947889.1| - 0.0017 18.5 8.5 0.016 15.4 8.5 2.2 1 1 0 1 1 1 1 Fibrinogen alpha/beta chain family DASH_Duo1 PF08651.10 gi|568164383|ref|YP_008947889.1| - 0.002 17.8 7.0 0.034 13.9 0.6 2.6 2 1 1 3 3 2 1 DASH complex subunit Duo1 Atg14 PF10186.9 gi|568164383|ref|YP_008947889.1| - 0.0023 17.1 3.3 0.0032 16.6 3.3 1.2 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 ApoLp-III PF07464.11 gi|568164383|ref|YP_008947889.1| - 0.0029 17.7 8.1 0.0087 16.2 8.1 1.8 1 1 0 1 1 1 1 Apolipophorin-III precursor (apoLp-III) HBM PF16591.5 gi|568164383|ref|YP_008947889.1| - 0.0031 17.0 3.8 0.0086 15.5 4.0 1.6 1 1 0 1 1 1 1 Helical bimodular sensor domain DUF812 PF05667.11 gi|568164383|ref|YP_008947889.1| - 0.0034 16.3 6.0 0.0048 15.8 6.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF812) ADIP PF11559.8 gi|568164383|ref|YP_008947889.1| - 0.0038 17.3 7.2 0.0067 16.5 7.2 1.3 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding NPV_P10 PF05531.12 gi|568164383|ref|YP_008947889.1| - 0.0046 17.4 6.0 0.21 12.1 0.7 3.0 1 1 1 2 2 2 1 Nucleopolyhedrovirus P10 protein Arfaptin PF06456.13 gi|568164383|ref|YP_008947889.1| - 0.0053 16.3 3.0 0.0071 15.9 3.0 1.2 1 0 0 1 1 1 1 Arfaptin-like domain FmiP_Thoc5 PF09766.9 gi|568164383|ref|YP_008947889.1| - 0.0079 15.5 3.6 0.012 14.9 3.6 1.3 1 0 0 1 1 1 1 Fms-interacting protein/Thoc5 CCDC85 PF10226.9 gi|568164383|ref|YP_008947889.1| - 0.008 15.9 1.9 0.008 15.9 1.9 1.7 1 1 0 1 1 1 1 CCDC85 family PriC PF07445.12 gi|568164383|ref|YP_008947889.1| - 0.0095 15.9 2.3 0.017 15.1 2.3 1.4 1 0 0 1 1 1 1 Primosomal replication protein priC GAS PF13851.6 gi|568164383|ref|YP_008947889.1| - 0.0097 15.3 6.6 0.018 14.4 6.6 1.4 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding ALMT PF11744.8 gi|568164383|ref|YP_008947889.1| - 0.01 14.7 4.9 0.016 14.1 3.6 1.6 1 1 1 2 2 2 0 Aluminium activated malate transporter Prominin PF05478.11 gi|568164383|ref|YP_008947889.1| - 0.01 13.8 3.0 0.013 13.5 3.0 1.1 1 0 0 1 1 1 0 Prominin DUF2570 PF10828.8 gi|568164383|ref|YP_008947889.1| - 0.011 15.6 7.4 0.022 14.6 7.0 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2570) AAA_13 PF13166.6 gi|568164383|ref|YP_008947889.1| - 0.011 14.4 5.2 0.019 13.7 5.2 1.3 1 0 0 1 1 1 0 AAA domain DUF948 PF06103.11 gi|568164383|ref|YP_008947889.1| - 0.012 15.8 3.9 0.056 13.7 3.3 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) Ntox28 PF15605.6 gi|568164383|ref|YP_008947889.1| - 0.013 15.8 2.9 0.049 13.9 0.9 2.3 1 1 1 2 2 2 0 Bacterial toxin 28 Glypican PF01153.19 gi|568164383|ref|YP_008947889.1| - 0.013 14.4 0.6 0.017 14.0 0.6 1.1 1 0 0 1 1 1 0 Glypican BCDHK_Adom3 PF10436.9 gi|568164383|ref|YP_008947889.1| - 0.014 15.2 0.4 0.019 14.8 0.4 1.3 1 0 0 1 1 1 0 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase TMF_DNA_bd PF12329.8 gi|568164383|ref|YP_008947889.1| - 0.017 15.1 7.2 0.017 15.1 7.2 2.8 2 1 1 3 3 2 0 TATA element modulatory factor 1 DNA binding MIT PF04212.18 gi|568164383|ref|YP_008947889.1| - 0.019 15.0 1.3 2.5 8.2 0.1 2.8 2 1 1 3 3 2 0 MIT (microtubule interacting and transport) domain ALIX_LYPXL_bnd PF13949.6 gi|568164383|ref|YP_008947889.1| - 0.022 14.1 5.4 0.031 13.6 5.4 1.3 1 0 0 1 1 1 0 ALIX V-shaped domain binding to HIV SlyX PF04102.12 gi|568164383|ref|YP_008947889.1| - 0.022 15.4 6.6 0.38 11.4 1.1 2.6 1 1 1 2 2 2 0 SlyX Phasin_2 PF09361.10 gi|568164383|ref|YP_008947889.1| - 0.025 14.9 1.2 2.6 8.4 0.1 2.4 1 1 1 2 2 2 0 Phasin protein ATG16 PF08614.11 gi|568164383|ref|YP_008947889.1| - 0.026 14.7 7.0 0.13 12.5 6.7 1.8 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) TMPIT PF07851.13 gi|568164383|ref|YP_008947889.1| - 0.027 13.8 3.9 0.039 13.2 3.9 1.3 1 0 0 1 1 1 0 TMPIT-like protein Collagen_mid PF15984.5 gi|568164383|ref|YP_008947889.1| - 0.028 14.2 0.3 0.046 13.5 0.3 1.3 1 0 0 1 1 1 0 Bacterial collagen, middle region Spc29 PF17082.5 gi|568164383|ref|YP_008947889.1| - 0.028 14.3 6.1 0.29 11.0 6.0 2.2 1 1 0 1 1 1 0 Spindle Pole Component 29 V_ATPase_I PF01496.19 gi|568164383|ref|YP_008947889.1| - 0.031 12.2 1.8 0.033 12.1 1.8 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family HsbA PF12296.8 gi|568164383|ref|YP_008947889.1| - 0.032 14.6 0.7 0.058 13.8 0.7 1.4 1 0 0 1 1 1 0 Hydrophobic surface binding protein A Fmp27_WPPW PF10359.9 gi|568164383|ref|YP_008947889.1| - 0.036 12.9 3.8 0.049 12.5 3.8 1.1 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain COG5 PF10392.9 gi|568164383|ref|YP_008947889.1| - 0.039 14.1 5.1 0.23 11.6 2.3 2.6 1 1 1 2 2 2 0 Golgi transport complex subunit 5 Senescence PF06911.12 gi|568164383|ref|YP_008947889.1| - 0.044 14.1 0.2 0.067 13.5 0.2 1.2 1 0 0 1 1 1 0 Senescence-associated protein Peptidase_S46 PF10459.9 gi|568164383|ref|YP_008947889.1| - 0.045 12.4 0.7 0.045 12.4 0.7 1.1 1 0 0 1 1 1 0 Peptidase S46 CorA PF01544.18 gi|568164383|ref|YP_008947889.1| - 0.052 12.9 2.5 0.094 12.0 2.5 1.4 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein IFT57 PF10498.9 gi|568164383|ref|YP_008947889.1| - 0.053 12.5 6.0 0.083 11.9 6.0 1.3 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 Vps53_N PF04100.12 gi|568164383|ref|YP_008947889.1| - 0.054 12.5 5.1 0.1 11.6 5.1 1.5 1 0 0 1 1 1 0 Vps53-like, N-terminal RPW8 PF05659.11 gi|568164383|ref|YP_008947889.1| - 0.057 13.1 4.9 0.66 9.7 1.1 2.3 1 1 1 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 USP8_interact PF08941.10 gi|568164383|ref|YP_008947889.1| - 0.067 13.0 1.0 0.14 12.0 1.0 1.6 1 0 0 1 1 1 0 USP8 interacting UPF0242 PF06785.11 gi|568164383|ref|YP_008947889.1| - 0.072 13.2 9.0 0.15 12.1 9.0 1.6 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus Vps51 PF08700.11 gi|568164383|ref|YP_008947889.1| - 0.073 13.2 4.3 0.85 9.7 2.6 2.5 1 1 1 2 2 2 0 Vps51/Vps67 BLOC1_2 PF10046.9 gi|568164383|ref|YP_008947889.1| - 0.076 13.3 8.6 0.78 10.1 3.0 2.4 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF1759 PF03564.15 gi|568164383|ref|YP_008947889.1| - 0.08 12.9 1.6 0.19 11.6 0.5 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1759) Helo_like_N PF17111.5 gi|568164383|ref|YP_008947889.1| - 0.088 12.2 3.3 0.3 10.4 1.0 1.9 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins PhaP_Bmeg PF09602.10 gi|568164383|ref|YP_008947889.1| - 0.1 12.5 7.6 0.72 9.8 7.6 2.1 1 1 0 1 1 1 0 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) APG17 PF04108.12 gi|568164383|ref|YP_008947889.1| - 0.11 11.6 7.3 0.5 9.4 1.1 1.9 1 1 1 2 2 2 0 Autophagy protein Apg17 DUF2383 PF09537.10 gi|568164383|ref|YP_008947889.1| - 0.11 12.9 3.5 1.6 9.1 0.3 2.7 1 1 1 2 2 2 0 Domain of unknown function (DUF2383) LXG PF04740.12 gi|568164383|ref|YP_008947889.1| - 0.11 12.2 6.4 0.37 10.5 6.4 1.8 1 1 0 1 1 1 0 LXG domain of WXG superfamily ISG65-75 PF11727.8 gi|568164383|ref|YP_008947889.1| - 0.12 11.6 2.1 0.17 11.1 2.1 1.3 1 0 0 1 1 1 0 Invariant surface glycoprotein HemX PF04375.14 gi|568164383|ref|YP_008947889.1| - 0.13 11.6 6.8 0.18 11.0 6.8 1.2 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase Laminin_II PF06009.12 gi|568164383|ref|YP_008947889.1| - 0.13 12.3 6.4 0.32 11.0 5.7 2.0 1 1 1 2 2 1 0 Laminin Domain II CREPT PF16566.5 gi|568164383|ref|YP_008947889.1| - 0.13 12.4 4.2 0.31 11.2 4.1 1.6 1 1 0 1 1 1 0 Cell-cycle alteration and expression-elevated protein in tumour CC2-LZ PF16516.5 gi|568164383|ref|YP_008947889.1| - 0.14 12.6 6.6 1.5 9.2 5.0 2.6 1 1 1 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator Seryl_tRNA_N PF02403.22 gi|568164383|ref|YP_008947889.1| - 0.14 12.4 9.1 0.58 10.4 9.1 2.0 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain DUF2312 PF10073.9 gi|568164383|ref|YP_008947889.1| - 0.15 11.7 6.4 2.4 7.9 0.8 3.3 2 1 1 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2312) FliD_N PF02465.18 gi|568164383|ref|YP_008947889.1| - 0.18 12.5 3.2 2.2 9.1 1.8 2.3 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus MetOD2 PF18548.1 gi|568164383|ref|YP_008947889.1| - 0.2 11.8 5.5 1.8 8.7 1.3 2.9 1 1 1 2 2 2 0 Metanogen output domain 2 JAKMIP_CC3 PF16034.5 gi|568164383|ref|YP_008947889.1| - 0.21 11.5 10.0 0.74 9.7 10.0 1.8 1 1 0 1 1 1 0 JAKMIP CC3 domain DHR10 PF18595.1 gi|568164383|ref|YP_008947889.1| - 0.22 11.6 7.6 0.37 10.9 7.6 1.3 1 0 0 1 1 1 0 Designed helical repeat protein 10 domain Spectrin PF00435.21 gi|568164383|ref|YP_008947889.1| - 0.23 12.0 7.2 2.8 8.5 7.0 2.2 1 1 1 2 2 2 0 Spectrin repeat Syntaxin-6_N PF09177.11 gi|568164383|ref|YP_008947889.1| - 0.24 12.0 3.2 3.4 8.3 1.8 2.4 1 1 1 2 2 2 0 Syntaxin 6, N-terminal Tweety PF04906.13 gi|568164383|ref|YP_008947889.1| - 0.26 9.9 2.1 0.37 9.4 2.1 1.2 1 0 0 1 1 1 0 Tweety DUF745 PF05335.13 gi|568164383|ref|YP_008947889.1| - 0.26 11.0 3.6 0.38 10.5 3.6 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF745) SMBP PF16785.5 gi|568164383|ref|YP_008947889.1| - 0.28 11.4 4.3 2.1 8.6 2.9 2.2 1 1 1 2 2 2 0 Small metal-binding protein DUF4795 PF16043.5 gi|568164383|ref|YP_008947889.1| - 0.29 10.7 8.9 2.7 7.5 2.0 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) DUF4763 PF15960.5 gi|568164383|ref|YP_008947889.1| - 0.3 10.4 5.4 1.6 7.9 5.6 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4763) Tektin PF03148.14 gi|568164383|ref|YP_008947889.1| - 0.32 9.7 6.9 3.1 6.5 1.2 2.1 1 1 1 2 2 2 0 Tektin family Syntaxin_2 PF14523.6 gi|568164383|ref|YP_008947889.1| - 0.36 11.2 9.5 0.57 10.6 4.6 2.4 1 1 1 2 2 2 0 Syntaxin-like protein Nup54 PF13874.6 gi|568164383|ref|YP_008947889.1| - 0.4 10.8 4.3 0.64 10.1 3.7 1.6 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 Rx_N PF18052.1 gi|568164383|ref|YP_008947889.1| - 0.42 10.9 4.2 33 4.8 4.2 2.7 1 1 0 1 1 1 0 Rx N-terminal domain Sec34 PF04136.15 gi|568164383|ref|YP_008947889.1| - 0.43 10.4 5.7 0.34 10.8 2.3 2.1 1 1 1 2 2 2 0 Sec34-like family FAM76 PF16046.5 gi|568164383|ref|YP_008947889.1| - 0.44 9.9 6.1 0.59 9.4 6.1 1.1 1 0 0 1 1 1 0 FAM76 protein TMP_2 PF06791.13 gi|568164383|ref|YP_008947889.1| - 0.48 10.1 4.0 0.35 10.5 1.8 1.7 1 1 1 2 2 2 0 Prophage tail length tape measure protein Corona_S2 PF01601.16 gi|568164383|ref|YP_008947889.1| - 0.49 8.8 4.0 2.6 6.4 3.6 2.0 1 1 1 2 2 2 0 Coronavirus S2 glycoprotein MitMem_reg PF13012.6 gi|568164383|ref|YP_008947889.1| - 0.5 10.8 3.5 7.6 7.0 3.5 2.6 1 1 1 2 2 2 0 Maintenance of mitochondrial structure and function FlaC_arch PF05377.11 gi|568164383|ref|YP_008947889.1| - 0.52 10.8 6.8 3.4 8.2 0.8 3.0 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) Tex_N PF09371.10 gi|568164383|ref|YP_008947889.1| - 0.6 9.8 6.9 7 6.3 0.9 2.4 1 1 1 2 2 2 0 Tex-like protein N-terminal domain TEX13 PF15186.6 gi|568164383|ref|YP_008947889.1| - 0.65 9.7 4.6 2.3 7.9 4.7 1.8 1 1 0 1 1 1 0 Testis-expressed sequence 13 protein family TMF_TATA_bd PF12325.8 gi|568164383|ref|YP_008947889.1| - 0.71 10.1 9.1 6.1 7.1 8.2 2.3 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding zf-C4H2 PF10146.9 gi|568164383|ref|YP_008947889.1| - 0.84 9.9 7.4 1.8 8.8 6.8 1.8 1 1 0 1 1 1 0 Zinc finger-containing protein Cauli_AT PF03233.13 gi|568164383|ref|YP_008947889.1| - 0.85 9.5 8.9 13 5.7 8.9 2.4 1 1 0 1 1 1 0 Aphid transmission protein NEMO PF11577.8 gi|568164383|ref|YP_008947889.1| - 0.92 9.6 5.1 6.8 6.8 1.1 3.5 1 1 1 2 2 2 0 NF-kappa-B essential modulator NEMO Csm1_N PF18504.1 gi|568164383|ref|YP_008947889.1| - 0.98 9.8 8.8 5.9 7.3 1.2 2.9 1 1 2 3 3 3 0 Csm1 N-terminal domain DUF5595 PF18077.1 gi|568164383|ref|YP_008947889.1| - 1.3 9.2 4.7 1.4 9.0 0.7 3.0 2 1 1 3 3 2 0 Domain of unknown function (DUF5595) DUF641 PF04859.12 gi|568164383|ref|YP_008947889.1| - 1.3 9.3 6.5 9 6.7 6.5 2.1 1 1 0 1 1 1 0 Plant protein of unknown function (DUF641) DUF2203 PF09969.9 gi|568164383|ref|YP_008947889.1| - 1.6 9.5 6.2 8.9 7.1 6.2 2.3 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) DUF4298 PF14131.6 gi|568164383|ref|YP_008947889.1| - 1.8 8.6 5.0 10 6.2 1.7 2.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4298) KELK PF15796.5 gi|568164383|ref|YP_008947889.1| - 2.7 8.5 8.7 2.3 8.7 5.3 2.5 2 1 1 3 3 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase Med9 PF07544.13 gi|568164383|ref|YP_008947889.1| - 4.6 7.4 9.8 16 5.7 1.1 2.7 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 XhlA PF10779.9 gi|568164383|ref|YP_008947889.1| - 4.7 7.5 7.4 6.4 7.1 1.9 2.6 1 1 0 2 2 2 0 Haemolysin XhlA COX7a PF02238.15 gi|568164384|ref|YP_008947890.1| - 0.21 12.0 0.4 0.21 12.0 0.4 1.7 2 0 0 2 2 2 0 Cytochrome c oxidase subunit VII Pyr_redox_2 PF07992.14 gi|568164385|ref|YP_008947891.1| - 8.7e-41 140.1 0.5 1e-40 139.8 0.5 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|568164385|ref|YP_008947891.1| - 3.2e-15 56.4 5.0 1.1e-13 51.5 1.0 2.6 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|568164385|ref|YP_008947891.1| - 9.2e-05 22.2 5.2 0.018 14.6 0.2 3.3 2 2 1 3 3 3 2 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 gi|568164385|ref|YP_008947891.1| - 0.00011 21.6 0.2 0.00026 20.4 0.0 1.6 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 gi|568164385|ref|YP_008947891.1| - 0.00046 19.4 1.0 0.0013 18.0 0.0 2.0 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) HycI PF01750.18 gi|568164385|ref|YP_008947891.1| - 0.0035 17.2 0.3 2.8 7.8 0.0 2.4 2 0 0 2 2 2 2 Hydrogenase maturation protease NAD_binding_8 PF13450.6 gi|568164385|ref|YP_008947891.1| - 0.013 15.8 0.1 5.7 7.2 0.0 2.8 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain NAD_binding_9 PF13454.6 gi|568164385|ref|YP_008947891.1| - 0.02 14.9 1.6 22 5.0 0.0 3.3 3 0 0 3 3 3 0 FAD-NAD(P)-binding HI0933_like PF03486.14 gi|568164385|ref|YP_008947891.1| - 0.082 11.6 1.7 1.2 7.8 0.4 3.0 3 1 0 3 3 3 0 HI0933-like protein FAD_binding_3 PF01494.19 gi|568164385|ref|YP_008947891.1| - 0.15 11.2 1.4 0.22 10.8 0.2 1.7 2 0 0 2 2 2 0 FAD binding domain TPP_enzyme_N PF02776.18 gi|568164386|ref|YP_008947892.1| - 2.7e-49 167.1 0.3 8.5e-47 158.9 0.0 2.2 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|568164386|ref|YP_008947892.1| - 8.8e-40 136.0 1.3 2.9e-39 134.3 0.1 2.3 2 1 1 3 3 3 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|568164386|ref|YP_008947892.1| - 8.7e-29 100.0 0.0 1.4e-28 99.3 0.0 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain POR_N PF01855.19 gi|568164386|ref|YP_008947892.1| - 0.00095 19.0 0.0 0.0023 17.7 0.0 1.6 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Peptidase_M55 PF04951.13 gi|568164386|ref|YP_008947892.1| - 0.076 12.4 0.0 0.13 11.6 0.0 1.3 1 0 0 1 1 1 0 D-aminopeptidase Aldedh PF00171.22 gi|568164387|ref|YP_008947893.1| - 5.2e-162 539.5 0.0 5.8e-162 539.4 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 gi|568164387|ref|YP_008947893.1| - 0.011 14.9 0.0 0.11 11.6 0.0 2.3 1 1 0 1 1 1 0 Acyl-CoA reductase (LuxC) FAA_hydrolase PF01557.18 gi|568164388|ref|YP_008947894.1| - 5.1e-26 91.7 0.0 2.5e-25 89.5 0.0 1.8 1 1 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family Abhydrolase_1 PF00561.20 gi|568164389|ref|YP_008947895.1| - 6.4e-25 88.3 0.0 2.1e-24 86.6 0.0 1.7 1 1 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|568164389|ref|YP_008947895.1| - 2.9e-20 72.6 0.0 2.2e-19 69.7 0.0 1.9 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 gi|568164389|ref|YP_008947895.1| - 1.1e-17 65.4 0.0 1.4e-17 65.0 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.21 gi|568164389|ref|YP_008947895.1| - 5.5e-09 35.8 0.0 0.00041 19.9 0.0 2.2 2 0 0 2 2 2 2 Prolyl oligopeptidase family Thioesterase PF00975.20 gi|568164389|ref|YP_008947895.1| - 6e-07 29.8 0.0 6.8e-07 29.6 0.0 1.2 1 0 0 1 1 1 1 Thioesterase domain Abhydrolase_2 PF02230.16 gi|568164389|ref|YP_008947895.1| - 1.2e-05 25.3 0.0 2.5e-05 24.2 0.0 1.5 1 0 0 1 1 1 1 Phospholipase/Carboxylesterase Peptidase_S15 PF02129.18 gi|568164389|ref|YP_008947895.1| - 8.8e-05 22.2 0.0 0.00045 19.9 0.0 1.9 1 1 0 1 1 1 1 X-Pro dipeptidyl-peptidase (S15 family) Lipase_3 PF01764.25 gi|568164389|ref|YP_008947895.1| - 0.0017 18.3 0.0 0.0052 16.7 0.0 1.8 1 1 1 2 2 2 1 Lipase (class 3) Esterase PF00756.20 gi|568164389|ref|YP_008947895.1| - 0.0023 17.6 0.0 0.0033 17.1 0.0 1.3 1 0 0 1 1 1 1 Putative esterase PGAP1 PF07819.13 gi|568164389|ref|YP_008947895.1| - 0.0023 17.7 0.0 0.0049 16.6 0.0 1.6 1 0 0 1 1 1 1 PGAP1-like protein BAAT_C PF08840.11 gi|568164389|ref|YP_008947895.1| - 0.0025 17.8 0.0 0.012 15.6 0.0 1.9 1 1 1 2 2 2 1 BAAT / Acyl-CoA thioester hydrolase C terminal Abhydrolase_3 PF07859.13 gi|568164389|ref|YP_008947895.1| - 0.0055 16.6 0.0 0.0097 15.8 0.0 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold Ndr PF03096.14 gi|568164389|ref|YP_008947895.1| - 0.0056 15.4 0.0 0.019 13.7 0.0 1.7 1 1 0 1 1 1 1 Ndr family DUF1749 PF08538.10 gi|568164389|ref|YP_008947895.1| - 0.011 14.8 0.0 0.02 14.0 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1749) AXE1 PF05448.12 gi|568164389|ref|YP_008947895.1| - 0.015 14.0 0.2 1.1 7.9 0.1 2.2 1 1 1 2 2 2 0 Acetyl xylan esterase (AXE1) DUF1057 PF06342.12 gi|568164389|ref|YP_008947895.1| - 0.016 14.2 0.1 0.042 12.9 0.1 1.7 1 1 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1057) Peptidase_S28 PF05577.12 gi|568164389|ref|YP_008947895.1| - 0.017 14.0 0.0 0.023 13.5 0.0 1.1 1 0 0 1 1 1 0 Serine carboxypeptidase S28 DUF915 PF06028.11 gi|568164389|ref|YP_008947895.1| - 0.021 14.2 0.2 0.038 13.3 0.0 1.7 2 0 0 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF915) DLH PF01738.18 gi|568164389|ref|YP_008947895.1| - 0.045 13.3 0.0 0.74 9.3 0.0 2.2 2 0 0 2 2 2 0 Dienelactone hydrolase family SecA_SW PF07516.13 gi|568164389|ref|YP_008947895.1| - 0.054 13.5 0.0 0.099 12.7 0.0 1.4 1 0 0 1 1 1 0 SecA Wing and Scaffold domain Palm_thioest PF02089.15 gi|568164389|ref|YP_008947895.1| - 0.055 13.3 0.0 0.093 12.5 0.0 1.5 1 1 0 1 1 1 0 Palmitoyl protein thioesterase RXLR_WY PF18634.1 gi|568164389|ref|YP_008947895.1| - 0.064 13.2 0.1 0.15 12.0 0.1 1.6 1 0 0 1 1 1 0 RXLR phytopathogen effector protein WY-domain DUF2974 PF11187.8 gi|568164389|ref|YP_008947895.1| - 0.081 12.5 0.0 0.41 10.2 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2974) Abhydrolase_4 PF08386.10 gi|568164389|ref|YP_008947895.1| - 0.15 12.1 0.0 0.25 11.5 0.0 1.3 1 0 0 1 1 1 0 TAP-like protein Gpr1_Fun34_YaaH PF01184.19 gi|568164390|ref|YP_008947896.1| - 1e-45 155.9 28.1 1.3e-45 155.5 28.1 1.1 1 0 0 1 1 1 1 GPR1/FUN34/yaaH family TauE PF01925.19 gi|568164391|ref|YP_008947897.1| - 1.3e-31 110.1 16.7 1.4e-31 110.0 16.7 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE Trp_oprn_chp PF09534.10 gi|568164391|ref|YP_008947897.1| - 0.032 14.0 0.4 1.2 8.8 0.0 2.6 1 1 1 3 3 3 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) DUF5385 PF17359.2 gi|568164391|ref|YP_008947897.1| - 0.083 12.4 2.8 1.6 8.3 0.0 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5385) EMP70 PF02990.16 gi|568164391|ref|YP_008947897.1| - 0.13 10.9 6.5 0.18 10.5 6.5 1.3 1 1 0 1 1 1 0 Endomembrane protein 70 ATP19 PF11022.8 gi|568164391|ref|YP_008947897.1| - 0.18 12.2 0.8 13 6.3 0.3 2.7 2 1 0 2 2 2 0 ATP synthase subunit K DUF2116 PF09889.9 gi|568164391|ref|YP_008947897.1| - 0.7 9.9 5.9 4.6 7.3 0.5 2.5 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) Tetraspanin PF00335.20 gi|568164391|ref|YP_008947897.1| - 1.6 8.4 12.1 1.3e+02 2.2 12.1 2.7 1 1 0 1 1 1 0 Tetraspanin family ATP1G1_PLM_MAT8 PF02038.16 gi|568164391|ref|YP_008947897.1| - 2.7 7.5 5.8 30 4.1 0.0 2.7 2 0 0 2 2 2 0 ATP1G1/PLM/MAT8 family MMPL PF03176.15 gi|568164392|ref|YP_008947898.1| - 1.6e-62 211.4 9.1 2.2e-31 109.0 1.4 2.3 2 0 0 2 2 2 2 MMPL family AA_permease PF00324.21 gi|568164393|ref|YP_008947899.1| - 9e-25 87.2 56.9 1.3e-24 86.7 56.9 1.2 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 gi|568164393|ref|YP_008947899.1| - 3e-15 56.0 58.9 4.1e-15 55.5 58.9 1.2 1 0 0 1 1 1 1 Amino acid permease PIN PF01850.21 gi|568164394|ref|YP_008947900.1| - 2.2e-14 54.0 0.5 2.8e-14 53.7 0.5 1.1 1 0 0 1 1 1 1 PIN domain SieB PF14163.6 gi|568164394|ref|YP_008947900.1| - 0.026 14.0 0.2 0.039 13.4 0.2 1.2 1 0 0 1 1 1 0 Super-infection exclusion protein B TFIID-18kDa PF02269.16 gi|568164394|ref|YP_008947900.1| - 0.035 14.1 0.0 0.058 13.4 0.0 1.5 1 0 0 1 1 1 0 Transcription initiation factor IID, 18kD subunit CitMHS_2 PF16980.5 gi|568164394|ref|YP_008947900.1| - 0.085 11.5 0.1 0.096 11.3 0.1 1.1 1 0 0 1 1 1 0 Putative citrate transport PIN_9 PF18477.1 gi|568164394|ref|YP_008947900.1| - 0.21 11.9 1.7 2.6 8.4 1.7 2.4 1 1 0 1 1 1 0 PIN like domain MazE_antitoxin PF04014.18 gi|568164395|ref|YP_008947901.1| - 6.5e-16 57.9 0.2 6.5e-16 57.9 0.2 1.5 2 0 0 2 2 2 1 Antidote-toxin recognition MazE, bacterial antitoxin PrlF_antitoxin PF15937.5 gi|568164395|ref|YP_008947901.1| - 4.8e-06 26.9 0.1 6e-06 26.6 0.1 1.3 1 1 0 1 1 1 1 prlF antitoxin for toxin YhaV_toxin DUF35_N PF12172.8 gi|568164396|ref|YP_008947902.1| - 4.4e-10 39.2 2.2 6.2e-10 38.8 2.2 1.2 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) OB_aCoA_assoc PF01796.17 gi|568164396|ref|YP_008947902.1| - 3.6e-05 23.7 0.1 5.2e-05 23.2 0.1 1.2 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated HypA PF01155.19 gi|568164396|ref|YP_008947902.1| - 0.00097 19.1 0.2 0.0014 18.6 0.2 1.3 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_13 PF09855.9 gi|568164396|ref|YP_008947902.1| - 0.0012 18.9 0.5 0.22 11.7 0.0 2.3 2 0 0 2 2 2 1 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) TackOD1 PF18551.1 gi|568164396|ref|YP_008947902.1| - 0.0021 17.8 0.1 0.0023 17.6 0.1 1.2 1 0 0 1 1 1 1 Thaumarchaeal output domain 1 zf-TFIIB PF13453.6 gi|568164396|ref|YP_008947902.1| - 0.0096 15.2 0.8 0.15 11.4 0.1 2.3 2 0 0 2 2 2 1 Transcription factor zinc-finger FdhE PF04216.12 gi|568164396|ref|YP_008947902.1| - 0.016 15.1 0.7 0.02 14.8 0.7 1.1 1 0 0 1 1 1 0 Protein involved in formate dehydrogenase formation zinc_ribbon_15 PF17032.5 gi|568164396|ref|YP_008947902.1| - 0.025 15.3 1.5 0.038 14.7 1.5 1.3 1 0 0 1 1 1 0 zinc-ribbon family zinc_ribbon_4 PF13717.6 gi|568164396|ref|YP_008947902.1| - 0.042 13.8 2.6 0.25 11.3 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain TFIIS_C PF01096.18 gi|568164396|ref|YP_008947902.1| - 0.053 13.4 2.1 4.4 7.2 0.1 2.4 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) TF_Zn_Ribbon PF08271.12 gi|568164396|ref|YP_008947902.1| - 0.083 12.4 2.7 0.76 9.3 0.1 2.3 1 1 1 2 2 2 0 TFIIB zinc-binding DUF951 PF06107.11 gi|568164396|ref|YP_008947902.1| - 0.18 11.7 0.9 0.38 10.7 0.1 1.9 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF951) zinc_ribbon_2 PF13240.6 gi|568164396|ref|YP_008947902.1| - 1 9.1 5.8 12 5.7 0.3 2.4 2 0 0 2 2 2 0 zinc-ribbon domain Thiolase_C PF02803.18 gi|568164397|ref|YP_008947903.1| - 7.7e-05 22.3 0.1 0.00045 19.9 0.0 2.2 2 0 0 2 2 2 1 Thiolase, C-terminal domain Peptidase_M22 PF00814.25 gi|568164397|ref|YP_008947903.1| - 0.03 14.0 0.0 0.058 13.1 0.0 1.3 1 0 0 1 1 1 0 Glycoprotease family DUF348 PF03990.14 gi|568164397|ref|YP_008947903.1| - 0.093 12.5 0.1 43 4.0 0.0 3.2 3 0 0 3 3 3 0 G5-linked-Ubiquitin-like domain MR_MLE_C PF13378.6 gi|568164398|ref|YP_008947904.1| - 5.2e-59 199.5 0.0 6.8e-59 199.1 0.0 1.1 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 gi|568164398|ref|YP_008947904.1| - 7.2e-18 64.9 0.0 1.3e-17 64.1 0.0 1.4 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMP-binding PF00501.28 gi|568164399|ref|YP_008947905.1| - 2.5e-84 283.3 0.0 3.3e-84 283.0 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|568164399|ref|YP_008947905.1| - 8e-20 71.6 0.5 1.4e-19 70.8 0.5 1.4 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain GH3 PF03321.13 gi|568164399|ref|YP_008947905.1| - 0.00017 20.6 0.1 0.00041 19.3 0.0 1.5 2 0 0 2 2 2 1 GH3 auxin-responsive promoter DUF713 PF05218.14 gi|568164399|ref|YP_008947905.1| - 0.13 12.0 0.0 11 5.7 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF713) adh_short_C2 PF13561.6 gi|568164400|ref|YP_008947906.1| - 1.3e-62 211.4 0.1 1.5e-62 211.2 0.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|568164400|ref|YP_008947906.1| - 8.8e-54 181.9 0.3 1e-53 181.7 0.3 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|568164400|ref|YP_008947906.1| - 6.8e-14 52.2 0.2 9.3e-14 51.7 0.2 1.1 1 0 0 1 1 1 1 KR domain YdjC PF04794.12 gi|568164400|ref|YP_008947906.1| - 0.15 12.1 0.0 0.22 11.5 0.0 1.2 1 0 0 1 1 1 0 YdjC-like protein Sugar_tr PF00083.24 gi|568164401|ref|YP_008947907.1| - 2.2e-24 86.1 31.2 3.2e-24 85.6 31.2 1.2 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|568164401|ref|YP_008947907.1| - 2.6e-22 79.3 49.2 2.6e-22 79.3 49.2 1.9 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF1128 PF06569.11 gi|568164401|ref|YP_008947907.1| - 0.11 12.4 0.1 0.23 11.5 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1128) MFS_2 PF13347.6 gi|568164401|ref|YP_008947907.1| - 1.1 7.8 40.1 0.012 14.2 6.7 3.2 2 1 1 3 3 3 0 MFS/sugar transport protein HTH_10 PF04967.12 gi|568164943|ref|YP_008947908.1| - 3.1e-16 58.9 0.0 5.5e-16 58.1 0.0 1.4 1 0 0 1 1 1 1 HTH DNA binding domain Sigma70_r4 PF04545.16 gi|568164943|ref|YP_008947908.1| - 0.0018 17.8 0.3 0.0054 16.2 0.1 1.9 2 0 0 2 2 2 1 Sigma-70, region 4 LacI PF00356.21 gi|568164943|ref|YP_008947908.1| - 0.045 13.6 0.1 0.1 12.4 0.1 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, lacI family Rieske PF00355.26 gi|568164403|ref|YP_008947910.1| - 1.2e-13 50.8 0.1 1.3e-13 50.6 0.1 1.1 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 gi|568164403|ref|YP_008947910.1| - 3e-09 36.8 0.0 3.5e-09 36.5 0.0 1.1 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain MNSV_P7B PF06692.11 gi|568164944|ref|YP_008947911.1| - 8.1 6.5 7.4 10 6.2 0.2 2.8 2 0 0 2 2 2 0 Melon necrotic spot virus P7B protein ABC_tran PF00005.27 gi|568164945|ref|YP_008947912.1| - 6.1e-06 26.8 0.0 1.4e-05 25.6 0.0 1.6 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|568164945|ref|YP_008947912.1| - 3.4e-05 23.8 0.0 5e-05 23.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|568164945|ref|YP_008947912.1| - 6.8e-05 22.4 0.0 9.8e-05 21.9 0.0 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 gi|568164945|ref|YP_008947912.1| - 0.012 15.8 0.1 0.21 11.8 0.1 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit ABC_tran PF00005.27 gi|568164946|ref|YP_008947913.1| - 4.8e-09 36.9 0.0 4.8e-09 36.9 0.0 1.0 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|568164946|ref|YP_008947913.1| - 8.6e-06 25.8 0.0 8.6e-06 25.8 0.0 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|568164946|ref|YP_008947913.1| - 0.00011 21.8 0.1 0.00015 21.4 0.1 1.2 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|568164946|ref|YP_008947913.1| - 0.00027 21.5 0.1 0.00027 21.5 0.1 1.3 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|568164946|ref|YP_008947913.1| - 0.00081 19.2 0.0 0.00091 19.0 0.0 1.1 1 0 0 1 1 1 1 AAA domain SRP54 PF00448.22 gi|568164946|ref|YP_008947913.1| - 0.0012 18.5 0.0 0.0014 18.3 0.0 1.1 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_15 PF13175.6 gi|568164946|ref|YP_008947913.1| - 0.0021 17.8 0.0 0.0021 17.8 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain NTPase_1 PF03266.15 gi|568164946|ref|YP_008947913.1| - 0.0026 17.7 0.0 0.0031 17.4 0.0 1.1 1 0 0 1 1 1 1 NTPase RsgA_GTPase PF03193.16 gi|568164946|ref|YP_008947913.1| - 0.0027 17.6 0.2 0.0028 17.6 0.2 1.4 1 1 0 1 1 1 1 RsgA GTPase SMC_N PF02463.19 gi|568164946|ref|YP_008947913.1| - 0.0028 17.1 0.0 0.0035 16.8 0.0 1.2 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 gi|568164946|ref|YP_008947913.1| - 0.0069 16.8 0.0 0.007 16.8 0.0 1.0 1 0 0 1 1 1 1 AAA ATPase domain ABC_ATPase PF09818.9 gi|568164946|ref|YP_008947913.1| - 0.017 13.9 0.2 0.021 13.6 0.2 1.1 1 0 0 1 1 1 0 Predicted ATPase of the ABC class AAA_25 PF13481.6 gi|568164946|ref|YP_008947913.1| - 0.083 12.4 0.0 0.084 12.4 0.0 1.2 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|568164946|ref|YP_008947913.1| - 0.095 12.6 0.0 0.096 12.6 0.0 1.1 1 0 0 1 1 1 0 NACHT domain AAA_22 PF13401.6 gi|568164946|ref|YP_008947913.1| - 0.097 12.9 0.0 0.097 12.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain Rad17 PF03215.15 gi|568164946|ref|YP_008947913.1| - 0.11 12.4 0.0 0.11 12.4 0.0 1.1 1 0 0 1 1 1 0 Rad17 P-loop domain MMR_HSR1 PF01926.23 gi|568164946|ref|YP_008947913.1| - 0.12 12.5 0.2 0.12 12.4 0.2 1.4 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_33 PF13671.6 gi|568164946|ref|YP_008947913.1| - 0.13 12.4 0.1 0.18 11.9 0.1 1.3 1 0 0 1 1 1 0 AAA domain AAA_27 PF13514.6 gi|568164946|ref|YP_008947913.1| - 0.16 11.5 0.0 0.22 11.1 0.0 1.1 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.14 gi|568164946|ref|YP_008947913.1| - 0.17 11.9 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) MukB PF04310.12 gi|568164946|ref|YP_008947913.1| - 0.2 11.5 0.2 0.31 10.8 0.1 1.4 1 1 0 1 1 1 0 MukB N-terminal MFS_1 PF07690.16 gi|568164404|ref|YP_008947915.1| - 4.1e-42 144.4 50.6 4.1e-42 144.4 50.6 3.5 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|568164404|ref|YP_008947915.1| - 4.4e-07 29.1 11.6 4.4e-07 29.1 11.6 2.8 3 0 0 3 3 3 2 Sugar (and other) transporter MFS_3 PF05977.13 gi|568164404|ref|YP_008947915.1| - 0.0014 17.1 10.7 0.0086 14.5 1.4 2.3 2 0 0 2 2 2 2 Transmembrane secretion effector DUF2583 PF10762.9 gi|568164404|ref|YP_008947915.1| - 0.2 12.1 2.1 10 6.6 0.0 4.0 3 0 0 3 3 3 0 Protein of unknown function (DUF2583) SLATT_fungal PF18142.1 gi|568164404|ref|YP_008947915.1| - 3.6 7.6 16.2 3.8 7.5 2.4 3.9 4 0 0 4 4 4 0 SMODS and SLOG-associating 2TM effector domain MarR PF01047.22 gi|568164948|ref|YP_008947916.1| - 7.3e-11 41.8 0.2 3.7e-10 39.6 0.0 2.2 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.6 gi|568164948|ref|YP_008947916.1| - 2.4e-10 40.7 0.3 1e-09 38.7 0.0 2.2 3 0 0 3 3 3 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|568164948|ref|YP_008947916.1| - 4e-09 36.2 0.0 8.4e-09 35.2 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|568164948|ref|YP_008947916.1| - 9.3e-06 25.1 0.1 3.6e-05 23.2 0.0 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_34 PF13601.6 gi|568164948|ref|YP_008947916.1| - 1.8e-05 24.8 0.1 3.3e-05 24.0 0.1 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain Fe_dep_repress PF01325.19 gi|568164948|ref|YP_008947916.1| - 8.3e-05 22.7 0.3 0.00018 21.6 0.1 1.7 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain HTH_45 PF14947.6 gi|568164948|ref|YP_008947916.1| - 0.00051 20.0 0.1 0.0011 18.9 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix GntR PF00392.21 gi|568164948|ref|YP_008947916.1| - 0.00083 19.0 0.1 0.0043 16.7 0.0 2.1 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family DUF3116 PF11313.8 gi|568164948|ref|YP_008947916.1| - 0.0043 16.9 0.0 0.011 15.6 0.0 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF3116) PaaX PF07848.12 gi|568164948|ref|YP_008947916.1| - 0.0059 16.8 0.0 0.01 16.0 0.0 1.5 1 0 0 1 1 1 1 PaaX-like protein B-block_TFIIIC PF04182.12 gi|568164948|ref|YP_008947916.1| - 0.012 15.7 0.0 0.026 14.7 0.0 1.7 1 1 0 1 1 1 0 B-block binding subunit of TFIIIC TrmB PF01978.19 gi|568164948|ref|YP_008947916.1| - 0.015 15.2 0.6 0.043 13.7 0.1 1.9 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB RQC PF09382.10 gi|568164948|ref|YP_008947916.1| - 0.018 14.8 0.2 0.033 14.0 0.2 1.3 1 0 0 1 1 1 0 RQC domain HTH_5 PF01022.20 gi|568164948|ref|YP_008947916.1| - 0.021 14.7 0.0 0.13 12.1 0.0 2.2 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family PadR PF03551.14 gi|568164948|ref|YP_008947916.1| - 0.033 14.1 0.3 0.1 12.6 0.1 1.9 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family HTH_Tnp_4 PF13613.6 gi|568164948|ref|YP_008947916.1| - 0.052 13.3 0.1 0.19 11.5 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix of DDE superfamily endonuclease DUF501 PF04417.12 gi|568164948|ref|YP_008947916.1| - 0.059 13.2 0.0 0.1 12.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF501) AbiEi_4 PF13338.6 gi|568164948|ref|YP_008947916.1| - 0.063 13.4 0.0 0.2 11.9 0.0 1.8 2 0 0 2 2 1 0 Transcriptional regulator, AbiEi antitoxin MazE_antitoxin PF04014.18 gi|568164405|ref|YP_008947919.1| - 4e-14 52.1 0.4 5.2e-14 51.8 0.4 1.2 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin PrlF_antitoxin PF15937.5 gi|568164405|ref|YP_008947919.1| - 7.3e-06 26.3 0.0 8.9e-06 26.1 0.0 1.3 1 1 0 1 1 1 1 prlF antitoxin for toxin YhaV_toxin AbrB-like PF14250.6 gi|568164405|ref|YP_008947919.1| - 0.0014 18.7 0.0 0.0019 18.3 0.0 1.2 1 0 0 1 1 1 1 AbrB-like transcriptional regulator CDC48_N PF02359.18 gi|568164405|ref|YP_008947919.1| - 0.017 15.3 0.1 0.02 15.0 0.1 1.2 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), N-terminal domain PIN PF01850.21 gi|568164406|ref|YP_008947920.1| - 1.1e-18 67.9 1.8 1.3e-18 67.7 1.8 1.0 1 0 0 1 1 1 1 PIN domain PIN_9 PF18477.1 gi|568164406|ref|YP_008947920.1| - 0.0015 18.9 0.6 0.023 15.0 0.6 2.1 1 1 0 1 1 1 1 PIN like domain PIN_4 PF13638.6 gi|568164406|ref|YP_008947920.1| - 0.0057 16.9 1.3 0.013 15.7 1.3 1.8 1 1 0 1 1 1 1 PIN domain RBD-FIP PF09457.10 gi|568164951|ref|YP_008947921.1| - 0.002 18.0 0.5 0.0042 17.0 0.5 1.5 1 0 0 1 1 1 1 FIP domain DUF3942 PF13078.6 gi|568164952|ref|YP_008947922.1| - 0.069 13.4 0.1 0.076 13.3 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3942) Glycos_transf_2 PF00535.26 gi|568164407|ref|YP_008947924.1| - 5.1e-15 55.7 1.2 9.8e-15 54.8 1.2 1.5 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|568164407|ref|YP_008947924.1| - 1e-05 25.6 0.0 3.2e-05 23.9 0.0 1.4 1 1 0 1 1 1 1 Glycosyltransferase like family 2 DoxD PF04173.13 gi|568164408|ref|YP_008947925.1| - 4.4e-44 150.3 7.9 5.2e-44 150.1 7.9 1.0 1 0 0 1 1 1 1 TQO small subunit DoxD DoxX PF07681.12 gi|568164408|ref|YP_008947925.1| - 4.1e-07 30.5 2.3 8e-07 29.6 2.3 1.5 1 0 0 1 1 1 1 DoxX PQQ PF01011.21 gi|568164410|ref|YP_008947927.1| - 0.058 13.3 0.0 15 5.7 0.0 2.8 2 0 0 2 2 2 0 PQQ enzyme repeat DrsE PF02635.15 gi|568164411|ref|YP_008947928.1| - 0.00024 21.4 0.0 0.00027 21.3 0.0 1.1 1 0 0 1 1 1 1 DsrE/DsrF-like family TusA PF01206.17 gi|568164413|ref|YP_008947930.1| - 1.9e-11 43.6 0.0 3.3e-11 42.9 0.0 1.4 1 0 0 1 1 1 1 Sulfurtransferase TusA DrsE_2 PF13686.6 gi|568164414|ref|YP_008947931.1| - 3.1e-12 46.6 0.6 1.4e-05 25.1 0.0 2.0 1 1 1 2 2 2 2 DsrE/DsrF/DrsH-like family DrsE PF02635.15 gi|568164414|ref|YP_008947931.1| - 1.5e-09 38.3 0.0 1.6e-09 38.1 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family Sulf_transp PF04143.14 gi|568164416|ref|YP_008947933.1| - 2.3e-63 214.7 21.7 3.4e-63 214.1 21.7 1.3 1 0 0 1 1 1 1 Sulphur transport DUF2231 PF09990.9 gi|568164416|ref|YP_008947933.1| - 0.38 11.2 10.3 3.1 8.3 6.5 3.9 3 1 0 3 3 3 0 Predicted membrane protein (DUF2231) TusA PF01206.17 gi|568164417|ref|YP_008947934.1| - 5.3e-20 71.0 0.1 6.1e-20 70.8 0.1 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA DUF2249 PF10006.9 gi|568164417|ref|YP_008947934.1| - 0.00047 20.0 0.0 0.00057 19.7 0.0 1.4 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2249) S1 PF00575.23 gi|568164417|ref|YP_008947934.1| - 0.075 13.4 0.3 0.12 12.8 0.3 1.7 1 1 0 1 1 1 0 S1 RNA binding domain Peptidase_U32_C PF16325.5 gi|568164417|ref|YP_008947934.1| - 0.15 12.4 0.0 0.22 11.8 0.0 1.3 1 0 0 1 1 1 0 Peptidase family U32 C-terminal domain NicO PF03824.16 gi|568164418|ref|YP_008947935.1| - 1.4e-88 296.9 13.0 1.9e-88 296.5 13.0 1.2 1 0 0 1 1 1 1 High-affinity nickel-transport protein Glycos_transf_2 PF00535.26 gi|568164954|ref|YP_008947936.1| - 3.5e-05 23.7 0.1 0.00015 21.6 0.0 1.9 1 1 1 2 2 2 1 Glycosyl transferase family 2 TPR_11 PF13414.6 gi|568164956|ref|YP_008947938.1| - 2.6e-74 244.7 52.3 1.5e-11 43.7 0.4 10.4 4 3 6 10 10 10 10 TPR repeat TPR_2 PF07719.17 gi|568164956|ref|YP_008947938.1| - 9.9e-69 222.0 42.1 1.6e-07 30.9 2.9 11.1 11 0 0 11 11 11 10 Tetratricopeptide repeat TPR_1 PF00515.28 gi|568164956|ref|YP_008947938.1| - 2.2e-62 204.5 50.8 1.2e-06 28.1 0.0 11.1 11 0 0 11 11 11 10 Tetratricopeptide repeat TPR_8 PF13181.6 gi|568164956|ref|YP_008947938.1| - 4.8e-50 163.6 33.0 6.4e-06 26.0 0.0 10.4 10 0 0 10 10 10 10 Tetratricopeptide repeat TPR_17 PF13431.6 gi|568164956|ref|YP_008947938.1| - 2.3e-47 156.0 35.9 7e-06 26.1 0.0 11.4 12 0 0 12 12 11 9 Tetratricopeptide repeat TPR_16 PF13432.6 gi|568164956|ref|YP_008947938.1| - 1.5e-46 156.7 5.0 2e-07 31.5 0.1 6.7 4 1 3 7 7 7 7 Tetratricopeptide repeat TPR_14 PF13428.6 gi|568164956|ref|YP_008947938.1| - 1.9e-41 137.1 1.5 0.0024 18.6 0.1 10.2 2 1 8 10 10 10 10 Tetratricopeptide repeat TPR_9 PF13371.6 gi|568164956|ref|YP_008947938.1| - 2.6e-32 110.8 0.2 5.5e-06 26.4 0.0 6.8 3 1 3 7 7 7 7 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|568164956|ref|YP_008947938.1| - 6.6e-30 103.2 16.7 8.4e-07 29.1 0.1 5.1 2 1 3 5 5 5 5 Anaphase-promoting complex, cyclosome, subunit 3 TPR_19 PF14559.6 gi|568164956|ref|YP_008947938.1| - 8.8e-27 93.4 16.3 1.6e-07 31.7 0.2 7.1 2 1 5 8 8 8 7 Tetratricopeptide repeat TPR_12 PF13424.6 gi|568164956|ref|YP_008947938.1| - 1.4e-18 67.0 19.9 0.0014 18.9 0.0 7.2 4 2 3 7 7 7 6 Tetratricopeptide repeat TPR_6 PF13174.6 gi|568164956|ref|YP_008947938.1| - 3.3e-15 55.6 23.4 0.11 13.2 0.0 9.9 10 1 0 10 10 10 3 Tetratricopeptide repeat TPR_20 PF14561.6 gi|568164956|ref|YP_008947938.1| - 5.5e-15 55.5 1.2 0.017 15.4 0.0 5.9 2 2 4 6 6 6 4 Tetratricopeptide repeat NARP1 PF12569.8 gi|568164956|ref|YP_008947938.1| - 5.9e-15 55.2 10.1 0.00043 19.3 0.0 6.4 1 1 4 7 7 7 6 NMDA receptor-regulated protein 1 BTAD PF03704.17 gi|568164956|ref|YP_008947938.1| - 1.3e-09 38.7 4.7 0.008 16.6 0.1 5.4 3 3 3 6 6 6 2 Bacterial transcriptional activator domain TPR_7 PF13176.6 gi|568164956|ref|YP_008947938.1| - 2.5e-09 36.5 12.1 4.5 7.5 0.1 9.6 10 0 0 10 10 10 1 Tetratricopeptide repeat TPR_10 PF13374.6 gi|568164956|ref|YP_008947938.1| - 1e-08 34.8 24.7 0.82 9.6 0.1 9.0 10 0 0 10 10 10 2 Tetratricopeptide repeat SHNi-TPR PF10516.9 gi|568164956|ref|YP_008947938.1| - 1.5e-08 34.0 4.4 3.5 7.2 0.0 7.9 8 0 0 8 8 8 1 SHNi-TPR ANAPC5 PF12862.7 gi|568164956|ref|YP_008947938.1| - 1.1e-06 28.6 4.9 0.98 9.5 0.3 5.7 2 1 2 5 5 5 2 Anaphase-promoting complex subunit 5 Syntaxin-6_N PF09177.11 gi|568164956|ref|YP_008947938.1| - 1.8e-06 28.4 0.3 0.91 10.1 0.0 4.8 2 1 4 6 6 5 2 Syntaxin 6, N-terminal DUF3808 PF10300.9 gi|568164956|ref|YP_008947938.1| - 2.3e-06 26.6 6.8 0.057 12.2 0.1 3.4 1 1 1 3 3 3 3 Protein of unknown function (DUF3808) TPR_15 PF13429.6 gi|568164956|ref|YP_008947938.1| - 1.8e-05 24.1 1.9 0.0049 16.1 0.2 3.7 1 1 2 3 3 3 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|568164956|ref|YP_008947938.1| - 0.00032 20.7 20.1 0.24 11.5 0.0 7.6 7 1 2 9 9 8 1 Fis1 C-terminal tetratricopeptide repeat DUF3856 PF12968.7 gi|568164956|ref|YP_008947938.1| - 0.0034 17.5 1.7 38 4.3 0.0 6.0 2 2 3 8 8 8 0 Domain of Unknown Function (DUF3856) HrpB1_HrpK PF09613.10 gi|568164956|ref|YP_008947938.1| - 0.0052 16.4 0.0 23 4.6 0.0 4.6 3 2 4 7 7 7 0 Bacterial type III secretion protein (HrpB1_HrpK) TOM20_plant PF06552.12 gi|568164956|ref|YP_008947938.1| - 0.0073 16.1 8.1 3.2 7.5 0.0 5.6 2 1 3 5 5 5 1 Plant specific mitochondrial import receptor subunit TOM20 Wzy_C_2 PF11846.8 gi|568164956|ref|YP_008947938.1| - 0.036 14.0 2.3 0.15 12.0 0.6 2.8 2 2 3 5 5 4 0 Virulence factor membrane-bound polymerase, C-terminal TFIIA_gamma_N PF02268.16 gi|568164956|ref|YP_008947938.1| - 0.039 14.0 2.5 13 5.9 0.3 4.9 4 1 0 4 4 4 0 Transcription initiation factor IIA, gamma subunit, helical domain Streptin-Immun PF11083.8 gi|568164956|ref|YP_008947938.1| - 0.062 13.7 2.6 5 7.6 0.2 3.4 2 1 1 3 3 3 0 Lantibiotic streptin immunity protein SNAP PF14938.6 gi|568164956|ref|YP_008947938.1| - 0.067 12.6 10.1 2.4 7.5 0.4 4.6 4 1 0 4 4 4 0 Soluble NSF attachment protein, SNAP SusD-like_3 PF14322.6 gi|568164956|ref|YP_008947938.1| - 0.074 13.4 8.0 0.12 12.7 0.0 4.4 5 1 1 6 6 6 0 Starch-binding associating with outer membrane MIT PF04212.18 gi|568164956|ref|YP_008947938.1| - 0.087 12.9 20.8 20 5.3 0.0 8.4 7 3 2 9 9 9 0 MIT (microtubule interacting and transport) domain EST1_DNA_bind PF10373.9 gi|568164956|ref|YP_008947938.1| - 0.1 12.0 3.8 8.8 5.7 0.0 4.2 4 1 1 5 5 4 0 Est1 DNA/RNA binding domain TPR_MalT PF17874.1 gi|568164956|ref|YP_008947938.1| - 0.11 11.8 0.0 34 3.7 0.0 3.4 3 1 1 4 4 4 0 MalT-like TPR region Gin PF10764.9 gi|568164956|ref|YP_008947938.1| - 0.38 10.7 7.2 25 4.9 0.1 5.4 6 0 0 6 6 5 0 Inhibitor of sigma-G Gin SNN_cytoplasm PF09051.10 gi|568164956|ref|YP_008947938.1| - 0.43 10.5 5.8 1.9 8.4 0.1 2.9 3 0 0 3 3 2 0 Stannin cytoplasmic CAS_CSE1 PF03378.15 gi|568164956|ref|YP_008947938.1| - 0.65 8.4 4.0 15 4.0 0.0 3.8 3 2 2 5 5 5 0 CAS/CSE protein, C-terminus ATPase_2 PF01637.18 gi|568164419|ref|YP_008947939.1| - 2.6e-22 79.9 0.4 4.4e-22 79.1 0.4 1.4 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_14 PF13173.6 gi|568164419|ref|YP_008947939.1| - 4.1e-09 36.6 0.1 3e-06 27.3 0.1 2.6 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|568164419|ref|YP_008947939.1| - 1.9e-07 31.4 0.1 6.1e-07 29.8 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|568164419|ref|YP_008947939.1| - 5.2e-05 23.7 0.0 0.00011 22.7 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 gi|568164419|ref|YP_008947939.1| - 0.00053 20.4 0.0 0.0092 16.4 0.0 2.4 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) TrmB PF01978.19 gi|568164419|ref|YP_008947939.1| - 0.0082 16.0 0.1 0.029 14.3 0.0 1.9 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB INT_SG_DDX_CT_C PF15300.6 gi|568164419|ref|YP_008947939.1| - 0.01 15.6 0.3 0.27 11.0 0.1 2.6 2 0 0 2 2 2 0 INTS6/SAGE1/DDX26B/CT45 C-terminus DUF815 PF05673.13 gi|568164419|ref|YP_008947939.1| - 0.084 12.0 0.0 0.14 11.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) bPH_2 PF03703.14 gi|568164957|ref|YP_008947940.1| - 1e-11 44.9 0.0 2e-11 43.9 0.0 1.5 1 0 0 1 1 1 1 Bacterial PH domain GvpG PF05120.12 gi|568164957|ref|YP_008947940.1| - 0.019 14.9 1.0 0.029 14.4 1.0 1.3 1 0 0 1 1 1 0 Gas vesicle protein G ThrE PF06738.12 gi|568164957|ref|YP_008947940.1| - 0.05 13.0 1.3 1.4 8.2 0.0 2.1 2 0 0 2 2 2 0 Putative threonine/serine exporter DMAP_binding PF06464.11 gi|568164957|ref|YP_008947940.1| - 0.43 11.4 2.6 0.69 10.7 2.6 1.2 1 0 0 1 1 1 0 DMAP1-binding Domain CHAD PF05235.14 gi|568164420|ref|YP_008947943.1| - 4.3e-06 26.9 0.8 0.026 14.5 0.2 2.4 1 1 1 2 2 2 2 CHAD domain Thymidylate_kin PF02223.17 gi|568164421|ref|YP_008947944.1| - 3.4e-11 43.2 0.0 4.1e-11 42.9 0.0 1.1 1 0 0 1 1 1 1 Thymidylate kinase AAA_18 PF13238.6 gi|568164421|ref|YP_008947944.1| - 0.0026 18.3 0.0 0.0073 16.9 0.0 1.7 1 1 0 1 1 1 1 AAA domain dNK PF01712.19 gi|568164421|ref|YP_008947944.1| - 0.0069 16.3 0.1 0.081 12.8 0.0 2.1 2 0 0 2 2 2 1 Deoxynucleoside kinase MobB PF03205.14 gi|568164421|ref|YP_008947944.1| - 0.0093 15.9 0.0 0.018 14.9 0.0 1.5 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B CPT PF07931.12 gi|568164421|ref|YP_008947944.1| - 0.015 15.2 0.0 0.021 14.7 0.0 1.3 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein AAA_16 PF13191.6 gi|568164421|ref|YP_008947944.1| - 0.015 15.7 0.0 0.02 15.3 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain KTI12 PF08433.10 gi|568164421|ref|YP_008947944.1| - 0.026 14.0 0.0 0.044 13.2 0.0 1.5 1 0 0 1 1 1 0 Chromatin associated protein KTI12 ATP_bind_1 PF03029.17 gi|568164421|ref|YP_008947944.1| - 0.03 14.1 0.0 0.07 12.9 0.0 1.6 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein MeaB PF03308.16 gi|568164421|ref|YP_008947944.1| - 0.066 12.2 0.0 0.11 11.4 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Thymidylate_kin PF02223.17 gi|568164422|ref|YP_008947945.1| - 7.2e-29 100.8 0.0 2.4e-28 99.1 0.0 1.7 1 1 0 1 1 1 1 Thymidylate kinase dNK PF01712.19 gi|568164422|ref|YP_008947945.1| - 9.5e-05 22.3 0.1 0.00016 21.6 0.1 1.6 1 1 0 1 1 1 1 Deoxynucleoside kinase AAA_18 PF13238.6 gi|568164422|ref|YP_008947945.1| - 0.0036 17.9 0.0 0.0095 16.5 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|568164422|ref|YP_008947945.1| - 0.048 14.1 0.1 0.64 10.4 0.0 2.7 2 1 0 2 2 2 0 AAA domain PRK PF00485.18 gi|568164422|ref|YP_008947945.1| - 0.13 12.0 0.1 9 6.0 0.0 2.3 1 1 1 2 2 2 0 Phosphoribulokinase / Uridine kinase family AAA_33 PF13671.6 gi|568164422|ref|YP_008947945.1| - 0.15 12.2 0.0 0.31 11.2 0.0 1.8 1 1 0 1 1 1 0 AAA domain Ppx-GppA PF02541.16 gi|568164423|ref|YP_008947946.1| - 2.5e-41 142.0 0.0 3.7e-41 141.5 0.0 1.2 1 0 0 1 1 1 1 Ppx/GppA phosphatase family DDR PF08841.10 gi|568164423|ref|YP_008947946.1| - 0.012 14.6 0.0 0.02 13.9 0.0 1.3 1 0 0 1 1 1 0 Diol dehydratase reactivase ATPase-like domain His_Phos_1 PF00300.22 gi|568164424|ref|YP_008947947.1| - 5.5e-14 52.3 0.0 5.1e-12 45.9 0.0 2.0 2 0 0 2 2 2 2 Histidine phosphatase superfamily (branch 1) B12-binding PF02310.19 gi|568164425|ref|YP_008947948.1| - 0.054 13.5 0.0 0.11 12.5 0.0 1.5 1 0 0 1 1 1 0 B12 binding domain UbiD PF01977.16 gi|568164426|ref|YP_008947949.1| - 4.1e-105 352.0 0.0 4.7e-105 351.8 0.0 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Cyclase PF04199.13 gi|568164427|ref|YP_008947951.1| - 1.7e-18 67.2 0.0 2.2e-18 66.8 0.0 1.2 1 0 0 1 1 1 1 Putative cyclase ADH_N PF08240.12 gi|568164428|ref|YP_008947952.1| - 9.2e-33 112.4 0.1 1.6e-32 111.6 0.1 1.4 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|568164428|ref|YP_008947952.1| - 2.6e-22 79.2 0.2 3.9e-22 78.6 0.2 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|568164428|ref|YP_008947952.1| - 1.8e-20 74.3 0.0 2.8e-20 73.7 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase DapB_N PF01113.20 gi|568164428|ref|YP_008947952.1| - 0.00037 20.6 0.8 0.00068 19.8 0.8 1.4 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Methyltransf_31 PF13847.6 gi|568164428|ref|YP_008947952.1| - 0.0008 19.2 0.0 0.0012 18.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|568164428|ref|YP_008947952.1| - 0.0077 16.9 0.0 0.014 16.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|568164428|ref|YP_008947952.1| - 0.013 16.2 0.0 0.023 15.4 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain ADH_N_2 PF16884.5 gi|568164428|ref|YP_008947952.1| - 0.044 13.7 0.0 0.098 12.6 0.0 1.5 1 0 0 1 1 1 0 N-terminal domain of oxidoreductase MTS PF05175.14 gi|568164428|ref|YP_008947952.1| - 0.14 11.7 0.1 0.22 11.0 0.1 1.2 1 0 0 1 1 1 0 Methyltransferase small domain MFS_1 PF07690.16 gi|568164429|ref|YP_008947954.1| - 2.2e-20 72.9 45.8 2.2e-20 72.9 45.8 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|568164429|ref|YP_008947954.1| - 7.7e-17 61.3 34.6 2.3e-12 46.5 11.0 2.5 1 1 0 2 2 2 2 Sugar (and other) transporter SHOCT PF09851.9 gi|568164429|ref|YP_008947954.1| - 0.087 12.6 0.4 0.16 11.7 0.4 1.5 1 0 0 1 1 1 0 Short C-terminal domain Rieske PF00355.26 gi|568164430|ref|YP_008947955.1| - 1.1e-16 60.5 0.0 1.8e-16 59.8 0.0 1.3 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Ring_hydroxyl_A PF00848.19 gi|568164430|ref|YP_008947955.1| - 1.3e-12 48.2 0.0 2.1e-11 44.2 0.0 2.2 1 1 0 1 1 1 1 Ring hydroxylating alpha subunit (catalytic domain) Ring_hydroxyl_B PF00866.18 gi|568164431|ref|YP_008947956.1| - 6.4e-23 81.4 0.1 7.2e-23 81.2 0.1 1.0 1 0 0 1 1 1 1 Ring hydroxylating beta subunit DUF3872 PF12988.7 gi|568164431|ref|YP_008947956.1| - 0.0018 18.1 0.1 0.0025 17.6 0.1 1.4 1 0 0 1 1 1 1 Domain of unknown function, B. Theta Gene description (DUF3872) WVELL PF14043.6 gi|568164431|ref|YP_008947956.1| - 0.014 15.2 0.1 0.022 14.6 0.1 1.4 1 0 0 1 1 1 0 WVELL protein YlbD_coat PF14071.6 gi|568164431|ref|YP_008947956.1| - 0.057 13.7 0.1 0.076 13.3 0.1 1.1 1 0 0 1 1 1 0 Putative coat protein SepA PF17080.5 gi|568164431|ref|YP_008947956.1| - 0.11 12.8 0.2 0.16 12.3 0.2 1.2 1 0 0 1 1 1 0 Multidrug Resistance efflux pump HTH_10 PF04967.12 gi|568164432|ref|YP_008947957.1| - 1.2e-22 79.5 0.0 4.2e-22 77.7 0.0 1.9 2 0 0 2 2 2 1 HTH DNA binding domain GerE PF00196.19 gi|568164432|ref|YP_008947957.1| - 0.00017 21.0 0.2 0.038 13.5 0.0 2.9 3 0 0 3 3 3 1 Bacterial regulatory proteins, luxR family HTH_24 PF13412.6 gi|568164432|ref|YP_008947957.1| - 0.0051 16.3 1.2 0.14 11.7 0.0 3.7 5 0 0 5 5 5 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|568164432|ref|YP_008947957.1| - 0.053 13.4 0.0 0.4 10.6 0.0 2.2 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 gi|568164432|ref|YP_008947957.1| - 0.079 12.9 0.1 23 5.1 0.0 3.3 3 0 0 3 3 3 0 HTH domain DUF134 PF02001.16 gi|568164432|ref|YP_008947957.1| - 0.13 12.8 0.0 0.22 12.1 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function DUF134 AMP-binding PF00501.28 gi|568164433|ref|YP_008947958.1| - 4.5e-82 275.9 0.0 5.8e-82 275.5 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|568164433|ref|YP_008947958.1| - 3.7e-23 82.3 0.7 7.2e-23 81.4 0.7 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain ECH_1 PF00378.20 gi|568164434|ref|YP_008947959.1| - 1.3e-55 188.5 0.0 1.4e-55 188.3 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|568164434|ref|YP_008947959.1| - 9.9e-33 114.0 0.0 1.4e-29 103.7 0.0 2.4 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase Ald_Xan_dh_C2 PF02738.18 gi|568164435|ref|YP_008947960.1| - 7.8e-120 400.9 0.0 9e-120 400.7 0.0 1.0 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 gi|568164435|ref|YP_008947960.1| - 1e-21 77.4 0.1 2.4e-21 76.1 0.1 1.7 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Sugar_tr PF00083.24 gi|568164436|ref|YP_008947961.1| - 6.7e-33 114.2 25.3 8.6e-33 113.9 25.3 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|568164436|ref|YP_008947961.1| - 9.6e-20 70.8 52.8 6e-17 61.6 22.1 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Gly-zipper_Omp PF13488.6 gi|568164436|ref|YP_008947961.1| - 0.0032 17.4 1.8 0.014 15.4 1.8 2.1 1 0 0 1 1 1 1 Glycine zipper Shikimate_dh_N PF08501.11 gi|568164437|ref|YP_008947962.1| - 2.6e-24 85.3 0.0 9.1e-24 83.5 0.0 2.0 3 0 0 3 3 3 1 Shikimate dehydrogenase substrate binding domain SDH_C PF18317.1 gi|568164437|ref|YP_008947962.1| - 0.0051 16.6 0.0 0.0087 15.8 0.0 1.3 1 0 0 1 1 1 1 Shikimate 5'-dehydrogenase C-terminal domain Catalase PF00199.19 gi|568164437|ref|YP_008947962.1| - 0.089 11.9 0.0 0.17 10.9 0.0 1.4 1 0 0 1 1 1 0 Catalase DUF962 PF06127.11 gi|568164438|ref|YP_008947963.1| - 0.18 11.9 4.4 0.24 11.5 0.2 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF962) PhaP_Bmeg PF09602.10 gi|568164962|ref|YP_008947964.1| - 0.003 17.5 0.3 0.14 12.1 0.1 2.1 1 1 1 2 2 2 2 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) RasGAP_C PF03836.15 gi|568164962|ref|YP_008947964.1| - 0.087 13.0 1.0 0.3 11.2 0.2 1.9 2 0 0 2 2 2 0 RasGAP C-terminus Hemerythrin PF01814.23 gi|568164439|ref|YP_008947965.1| - 2e-09 38.1 0.7 1.6e-06 28.8 0.2 2.3 2 1 0 2 2 2 2 Hemerythrin HHE cation binding domain Xol-1_N PF09108.10 gi|568164439|ref|YP_008947965.1| - 0.069 13.0 1.1 0.099 12.5 1.1 1.3 1 1 0 1 1 1 0 Switch protein XOL-1, N-terminal MutL PF13941.6 gi|568164439|ref|YP_008947965.1| - 0.19 10.3 0.0 0.25 9.9 0.0 1.2 1 0 0 1 1 1 0 MutL protein DUF2249 PF10006.9 gi|568164440|ref|YP_008947966.1| - 1.2e-18 66.7 0.0 1.9e-18 66.1 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2249) Cupin_2 PF07883.11 gi|568164440|ref|YP_008947966.1| - 1.9e-06 27.4 0.1 7.9e-06 25.5 0.1 1.9 2 0 0 2 2 2 1 Cupin domain AraC_binding PF02311.19 gi|568164440|ref|YP_008947966.1| - 8.7e-05 22.4 0.0 0.00014 21.8 0.0 1.3 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_1 PF00190.22 gi|568164440|ref|YP_008947966.1| - 0.024 14.3 0.0 0.049 13.2 0.0 1.5 1 1 0 1 1 1 0 Cupin Auxin_BP PF02041.16 gi|568164440|ref|YP_008947966.1| - 0.025 14.2 0.0 0.049 13.3 0.0 1.5 1 0 0 1 1 1 0 Auxin binding protein Cupin_6 PF12852.7 gi|568164440|ref|YP_008947966.1| - 0.029 14.1 0.0 0.058 13.1 0.0 1.4 2 0 0 2 2 2 0 Cupin Cupin_3 PF05899.12 gi|568164440|ref|YP_008947966.1| - 0.04 13.6 0.0 0.082 12.6 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF861) FeS_assembly_P PF01883.19 gi|568164441|ref|YP_008947967.1| - 1.5e-17 63.5 0.1 1.9e-17 63.2 0.1 1.1 1 0 0 1 1 1 1 Iron-sulfur cluster assembly protein Hyd_WA PF06462.12 gi|568164441|ref|YP_008947967.1| - 0.097 12.7 0.1 0.16 12.0 0.1 1.3 1 0 0 1 1 1 0 Propeller Ribosomal_L13 PF00572.18 gi|568164963|ref|YP_008947969.1| - 0.007 16.6 0.0 0.012 15.8 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L13 MFS_1 PF07690.16 gi|568164443|ref|YP_008947970.1| - 1.8e-40 138.9 73.9 1.6e-30 106.3 47.1 1.8 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 gi|568164443|ref|YP_008947970.1| - 9.2e-05 21.0 5.2 9.2e-05 21.0 5.2 2.1 2 0 0 2 2 2 2 Transmembrane secretion effector Integrase_Zn PF02022.19 gi|568164444|ref|YP_008947971.1| - 0.13 12.3 0.1 0.65 10.0 0.0 2.0 1 1 1 2 2 2 0 Integrase Zinc binding domain Sugar_tr PF00083.24 gi|568164445|ref|YP_008947972.1| - 4.8e-30 104.8 22.4 6e-30 104.5 22.4 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|568164445|ref|YP_008947972.1| - 5.5e-21 74.9 30.9 5.5e-21 74.9 30.9 1.8 1 1 1 2 2 2 2 Major Facilitator Superfamily TMEM43 PF07787.12 gi|568164445|ref|YP_008947972.1| - 0.63 9.4 4.1 0.11 11.9 0.2 1.7 2 0 0 2 2 2 0 Transmembrane protein 43 YtxH PF12732.7 gi|568164446|ref|YP_008947973.1| - 0.095 13.3 14.6 0.15 12.6 14.6 1.4 1 1 0 1 1 1 0 YtxH-like protein DUF883 PF05957.13 gi|568164446|ref|YP_008947973.1| - 0.15 12.7 7.2 0.2 12.3 7.2 1.3 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF883) Phage_Gp111 PF07410.11 gi|568164446|ref|YP_008947973.1| - 0.15 12.5 7.0 0.16 12.4 7.0 1.1 1 0 0 1 1 1 0 Streptococcus thermophilus bacteriophage Gp111 protein AIM3 PF17096.5 gi|568164446|ref|YP_008947973.1| - 0.34 11.9 11.7 0.4 11.7 11.7 1.1 1 0 0 1 1 1 0 Altered inheritance of mitochondria protein 3 Hydantoinase_A PF01968.18 gi|568164446|ref|YP_008947973.1| - 2.4 7.3 7.2 2.5 7.3 7.2 1.0 1 0 0 1 1 1 0 Hydantoinase/oxoprolinase ATP-synt_B PF00430.18 gi|568164446|ref|YP_008947973.1| - 2.4 8.2 13.0 2.8 8.0 13.0 1.2 1 0 0 1 1 1 0 ATP synthase B/B' CF(0) DUF4352 PF11611.8 gi|568164964|ref|YP_008947974.1| - 7.9e-13 48.8 4.8 1.1e-05 25.8 0.1 3.1 2 1 0 2 2 2 2 Domain of unknown function (DUF4352) TMEM71 PF15121.6 gi|568164964|ref|YP_008947974.1| - 0.015 15.0 2.0 0.033 13.9 2.0 1.6 1 0 0 1 1 1 0 TMEM71 protein family DUF5119 PF17145.4 gi|568164964|ref|YP_008947974.1| - 0.17 11.8 2.1 1.6 8.6 0.1 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF5119) DUF4307 PF14155.6 gi|568164964|ref|YP_008947974.1| - 0.59 10.0 3.5 1.1 9.1 3.5 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4307) DUF4369 PF14289.6 gi|568164964|ref|YP_008947974.1| - 2.5 8.7 8.6 2.4 8.8 0.5 4.1 3 2 1 4 4 4 0 Domain of unknown function (DUF4369) YhfC PF10086.9 gi|568164965|ref|YP_008947975.1| - 0.043 13.2 5.8 1.3 8.3 0.0 2.1 1 1 1 2 2 2 0 YhfC intramembrane metalloprotease p450 PF00067.22 gi|568164447|ref|YP_008947977.1| - 4.7e-22 78.4 0.1 3.8e-18 65.5 0.0 3.0 2 1 1 3 3 3 3 Cytochrome P450 DUF973 PF06157.11 gi|568164448|ref|YP_008947978.1| - 2.5e-84 283.0 42.8 1.1e-83 280.9 42.8 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF973) DUF996 PF06195.13 gi|568164448|ref|YP_008947978.1| - 4.7e-06 26.9 34.0 8.1e-06 26.2 22.9 2.4 2 0 0 2 2 2 2 Protein of unknown function (DUF996) DUF2157 PF09925.9 gi|568164448|ref|YP_008947978.1| - 0.14 11.9 4.6 1.2 8.9 4.5 2.4 1 1 0 1 1 1 0 Predicted membrane protein (DUF2157) DUF4690 PF15756.5 gi|568164448|ref|YP_008947978.1| - 1.5 9.4 4.3 3.9 8.2 3.0 2.2 2 0 0 2 2 2 0 Small Novel Rich in Cartilage Isochorismatase PF00857.20 gi|568164449|ref|YP_008947979.1| - 3.4e-29 102.2 0.0 4e-29 102.0 0.0 1.1 1 0 0 1 1 1 1 Isochorismatase family Soyouz_module PF14313.6 gi|568164449|ref|YP_008947979.1| - 0.043 13.6 0.1 0.14 11.9 0.0 1.8 2 0 0 2 2 2 0 N-terminal region of Paramyxovirinae phosphoprotein (P) AP_endonuc_2 PF01261.24 gi|568164449|ref|YP_008947979.1| - 0.043 13.2 0.0 0.072 12.5 0.0 1.3 1 0 0 1 1 1 0 Xylose isomerase-like TIM barrel MFS_1 PF07690.16 gi|568164450|ref|YP_008947980.1| - 5.9e-60 203.1 53.5 1.5e-58 198.4 46.6 2.0 2 0 0 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|568164450|ref|YP_008947980.1| - 3.1e-08 32.9 38.1 4e-08 32.6 15.6 2.8 3 0 0 3 3 3 2 Sugar (and other) transporter MFS_3 PF05977.13 gi|568164450|ref|YP_008947980.1| - 7.6e-05 21.3 9.1 7.6e-05 21.3 9.1 2.2 2 0 0 2 2 2 2 Transmembrane secretion effector Fuseless PF15993.5 gi|568164451|ref|YP_008947982.1| - 0.0031 16.8 2.0 0.0031 16.7 2.0 1.0 1 0 0 1 1 1 1 Fuseless Phage_holin_3_6 PF07332.11 gi|568164451|ref|YP_008947982.1| - 0.19 11.8 2.0 0.24 11.5 2.0 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III TRIQK PF15168.6 gi|568164451|ref|YP_008947982.1| - 0.54 10.2 2.5 9.6 6.2 0.3 2.0 2 0 0 2 2 2 0 Triple QxxK/R motif-containing protein family DUF4220 PF13968.6 gi|568164451|ref|YP_008947982.1| - 0.8 9.0 3.0 0.88 8.9 3.0 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4220) SecE PF00584.20 gi|568164451|ref|YP_008947982.1| - 0.93 9.5 7.7 0.93 9.5 2.3 2.2 2 0 0 2 2 2 0 SecE/Sec61-gamma subunits of protein translocation complex ATP1G1_PLM_MAT8 PF02038.16 gi|568164452|ref|YP_008947983.1| - 0.21 11.0 2.1 0.3 10.5 2.1 1.3 1 0 0 1 1 1 0 ATP1G1/PLM/MAT8 family Cytochrom_B_N_2 PF13631.6 gi|568164453|ref|YP_008947984.1| - 1.7e-55 187.6 3.1 1.7e-55 187.6 3.1 3.5 4 1 1 5 5 5 1 Cytochrome b(N-terminal)/b6/petB Cytochrome_B PF00033.19 gi|568164453|ref|YP_008947984.1| - 1.4e-23 83.7 11.2 1.4e-23 83.7 11.2 2.1 3 0 0 3 3 3 1 Cytochrome b/b6/petB Cytochrom_B_C PF00032.17 gi|568164453|ref|YP_008947984.1| - 0.0014 18.8 1.6 0.0014 18.8 1.6 3.8 4 1 0 4 4 4 2 Cytochrome b(C-terminal)/b6/petD COX1 PF00115.20 gi|568164454|ref|YP_008947985.1| - 7e-72 242.6 64.8 8.6e-72 242.3 64.8 1.1 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I Ac76 PF05814.11 gi|568164455|ref|YP_008947986.1| - 0.088 12.8 0.4 0.18 11.8 0.4 1.5 1 0 0 1 1 1 0 Orf76 (Ac76) Rieske PF00355.26 gi|568164456|ref|YP_008947987.1| - 4.3e-08 33.0 0.3 1.5e-07 31.3 0.3 1.8 1 1 0 1 1 1 1 Rieske [2Fe-2S] domain DUF2275 PF10039.9 gi|568164456|ref|YP_008947987.1| - 0.2 11.7 0.0 0.27 11.3 0.0 1.2 1 0 0 1 1 1 0 Predicted integral membrane protein (DUF2275) OAD_gamma PF04277.13 gi|568164457|ref|YP_008947988.1| - 0.35 11.5 0.4 0.35 11.5 0.4 2.1 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain Phage_holin_3_6 PF07332.11 gi|568164458|ref|YP_008947989.1| - 6.1 6.9 11.7 0.53 10.4 6.9 1.6 2 0 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III FliMN_C PF01052.20 gi|568164459|ref|YP_008947990.1| - 0.026 14.5 0.1 0.098 12.7 0.0 1.8 2 0 0 2 2 2 0 Type III flagellar switch regulator (C-ring) FliN C-term DUF3930 PF13067.6 gi|568164459|ref|YP_008947990.1| - 0.1 12.8 1.1 0.26 11.6 1.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3930) HRG PF16954.5 gi|568164459|ref|YP_008947990.1| - 0.93 10.0 0.0 0.93 10.0 0.0 3.6 4 0 0 4 4 4 0 Haem-transporter, endosomal/lysosomal, haem-responsive gene Nramp PF01566.18 gi|568164460|ref|YP_008947991.1| - 5.2e-39 134.2 18.9 6.4e-39 133.9 18.9 1.1 1 0 0 1 1 1 1 Natural resistance-associated macrophage protein PfaD_N PF18328.1 gi|568164460|ref|YP_008947991.1| - 0.079 12.9 0.0 0.15 12.0 0.0 1.5 1 0 0 1 1 1 0 Fatty acid synthase subunit PfaD N-terminal domain Sugar_tr PF00083.24 gi|568164461|ref|YP_008947992.1| - 2.4e-49 168.4 19.8 3e-49 168.1 19.8 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|568164461|ref|YP_008947992.1| - 2.4e-23 82.6 32.9 2.4e-23 82.6 32.9 1.9 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF1129 PF06570.11 gi|568164461|ref|YP_008947992.1| - 0.012 15.2 0.6 0.012 15.2 0.6 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF1129) ydhR PF08803.11 gi|568164461|ref|YP_008947992.1| - 0.15 12.0 0.0 0.27 11.2 0.0 1.3 1 0 0 1 1 1 0 Putative mono-oxygenase ydhR SoxE PF06525.11 gi|568164462|ref|YP_008947993.1| - 5.8e-58 194.6 8.8 6.4e-58 194.5 8.8 1.0 1 0 0 1 1 1 1 Sulfocyanin (SoxE) domain Cupredoxin_1 PF13473.6 gi|568164462|ref|YP_008947993.1| - 0.035 14.2 0.0 2 8.6 0.0 2.1 2 0 0 2 2 2 0 Cupredoxin-like domain DUF4912 PF16258.5 gi|568164462|ref|YP_008947993.1| - 0.099 12.9 0.0 0.14 12.4 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4912) MFS_1 PF07690.16 gi|568164463|ref|YP_008947995.1| - 3.8e-20 72.1 43.1 6.3e-15 54.9 19.6 2.0 2 0 0 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|568164463|ref|YP_008947995.1| - 0.0001 21.3 15.2 0.18 10.6 3.2 3.7 2 2 0 3 3 3 3 MFS_1 like family MFS_3 PF05977.13 gi|568164463|ref|YP_008947995.1| - 0.0016 16.9 0.9 0.0016 16.9 0.9 1.7 2 0 0 2 2 2 1 Transmembrane secretion effector DUF3325 PF11804.8 gi|568164463|ref|YP_008947995.1| - 0.16 12.1 7.2 1.1 9.5 1.7 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3325) DUF2542 PF10808.8 gi|568164463|ref|YP_008947995.1| - 0.73 10.4 0.0 0.73 10.4 0.0 3.7 4 0 0 4 4 4 0 Protein of unknown function (DUF2542) Fer4_10 PF13237.6 gi|568164464|ref|YP_008947996.1| - 3.7e-07 30.1 5.6 6e-07 29.5 5.6 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|568164464|ref|YP_008947996.1| - 0.00021 21.4 5.1 0.00021 21.4 5.1 1.9 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|568164464|ref|YP_008947996.1| - 0.00035 21.1 10.1 0.002 18.7 8.9 2.4 2 1 2 4 4 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|568164464|ref|YP_008947996.1| - 0.0007 19.6 8.4 0.085 13.0 0.4 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|568164464|ref|YP_008947996.1| - 0.0036 18.2 2.2 0.42 11.6 0.0 2.5 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|568164464|ref|YP_008947996.1| - 0.012 15.7 5.4 0.029 14.5 5.4 1.6 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4 PF00037.27 gi|568164464|ref|YP_008947996.1| - 0.13 12.1 10.5 0.071 13.0 0.9 2.9 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_20 PF14691.6 gi|568164464|ref|YP_008947996.1| - 0.16 11.8 4.7 0.14 11.9 1.8 2.1 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_18 PF13746.6 gi|568164464|ref|YP_008947996.1| - 0.19 11.9 2.7 0.37 11.0 2.7 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|568164464|ref|YP_008947996.1| - 0.29 11.7 0.2 0.29 11.7 0.2 2.5 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|568164464|ref|YP_008947996.1| - 0.75 10.3 9.2 1.6 9.2 0.2 2.7 2 1 0 3 3 3 0 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|568164464|ref|YP_008947996.1| - 1.2 9.4 14.2 1.2 9.4 2.5 2.8 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_3 PF12798.7 gi|568164464|ref|YP_008947996.1| - 1.4 10.0 12.2 5.6 8.1 0.9 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_4 PF12800.7 gi|568164464|ref|YP_008947996.1| - 1.6 9.5 6.8 8.8 7.1 2.0 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain SLATT_fungal PF18142.1 gi|568164465|ref|YP_008947997.1| - 1.1 9.2 8.5 0.26 11.3 4.3 2.0 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain Nitrate_red_del PF02613.15 gi|568164466|ref|YP_008947998.1| - 1.1e-17 64.3 0.0 1.4e-17 64.0 0.0 1.2 1 0 0 1 1 1 1 Nitrate reductase delta subunit Fer4_11 PF13247.6 gi|568164467|ref|YP_008947999.1| - 1.6e-18 66.7 8.8 1.6e-18 66.7 8.8 2.0 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|568164467|ref|YP_008947999.1| - 5.2e-12 46.2 17.2 1.8e-05 25.2 4.1 3.1 2 2 1 3 3 3 3 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|568164467|ref|YP_008947999.1| - 6.1e-08 32.7 21.1 0.0011 19.1 6.9 3.0 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|568164467|ref|YP_008947999.1| - 1.7e-07 31.2 21.1 4.2e-05 23.6 9.4 3.3 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|568164467|ref|YP_008947999.1| - 3.4e-05 24.2 17.4 6.1e-05 23.4 1.0 3.0 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|568164467|ref|YP_008947999.1| - 7.6e-05 22.4 3.6 7.6e-05 22.4 3.6 4.3 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_6 PF12837.7 gi|568164467|ref|YP_008947999.1| - 0.00017 21.5 2.0 0.00017 21.5 2.0 4.8 5 0 0 5 5 5 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|568164467|ref|YP_008947999.1| - 0.0002 21.2 27.3 0.00052 20.0 1.2 4.6 5 0 0 5 5 5 3 4Fe-4S binding domain Fer4_4 PF12800.7 gi|568164467|ref|YP_008947999.1| - 0.00052 20.3 35.4 0.0064 16.9 3.1 4.7 5 0 0 5 5 5 3 4Fe-4S binding domain Fer4_17 PF13534.6 gi|568164467|ref|YP_008947999.1| - 0.011 16.2 22.2 0.2 12.3 0.3 3.7 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|568164467|ref|YP_008947999.1| - 0.82 9.8 27.8 0.81 9.9 1.4 3.6 3 1 0 3 3 3 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|568164467|ref|YP_008947999.1| - 5.4 8.2 39.3 0.12 13.3 7.9 4.3 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_16 PF13484.6 gi|568164467|ref|YP_008947999.1| - 6.1 7.9 25.1 2.6 9.0 0.3 3.8 2 1 2 4 4 4 0 4Fe-4S double cluster binding domain Molybdopterin PF00384.22 gi|568164468|ref|YP_008948000.1| - 0.00032 19.8 0.0 0.89 8.4 0.0 2.9 3 0 0 3 3 3 2 Molybdopterin oxidoreductase TAT_signal PF10518.9 gi|568164468|ref|YP_008948000.1| - 0.011 15.6 0.2 0.023 14.5 0.2 1.6 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Tymo_45kd_70kd PF03251.13 gi|568164468|ref|YP_008948000.1| - 0.065 12.2 0.3 0.11 11.4 0.3 1.2 1 0 0 1 1 1 0 Tymovirus 45/70Kd protein Molybdop_Fe4S4 PF04879.16 gi|568164468|ref|YP_008948000.1| - 0.12 12.4 0.4 0.23 11.5 0.4 1.5 1 0 0 1 1 1 0 Molybdopterin oxidoreductase Fe4S4 domain TrmB PF01978.19 gi|568164469|ref|YP_008948001.1| - 0.00089 19.1 0.0 0.0021 17.9 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|568164469|ref|YP_008948001.1| - 0.0088 15.9 0.0 0.022 14.6 0.0 1.7 2 0 0 2 2 2 1 MarR family HTH_Crp_2 PF13545.6 gi|568164469|ref|YP_008948001.1| - 0.084 12.9 0.0 0.2 11.7 0.0 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HVSL PF09749.9 gi|568164469|ref|YP_008948001.1| - 0.092 12.2 0.0 0.12 11.9 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised conserved protein HTH_36 PF13730.6 gi|568164469|ref|YP_008948001.1| - 0.11 12.5 0.1 0.51 10.3 0.1 2.2 2 1 0 2 2 2 0 Helix-turn-helix domain DUF2999 PF11212.8 gi|568164969|ref|YP_008948002.1| - 0.079 13.2 0.1 2.9 8.2 0.0 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF2999) TPR_2 PF07719.17 gi|568164470|ref|YP_008948003.1| - 3e-19 67.5 14.6 0.012 15.6 0.1 7.1 6 1 1 7 7 7 5 Tetratricopeptide repeat TPR_19 PF14559.6 gi|568164470|ref|YP_008948003.1| - 8.1e-18 64.7 0.5 4.7e-10 39.8 0.0 4.1 3 1 1 4 4 4 3 Tetratricopeptide repeat TPR_16 PF13432.6 gi|568164470|ref|YP_008948003.1| - 2e-16 60.3 0.0 4.9e-07 30.3 0.0 4.0 4 0 0 4 4 4 2 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|568164470|ref|YP_008948003.1| - 9.8e-16 57.8 9.6 7.4e-05 22.9 0.2 4.1 2 1 2 4 4 4 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_11 PF13414.6 gi|568164470|ref|YP_008948003.1| - 3.4e-15 55.4 6.4 0.0066 16.1 0.0 5.8 5 1 1 6 6 6 4 TPR repeat TPR_8 PF13181.6 gi|568164470|ref|YP_008948003.1| - 1e-11 44.1 11.7 0.016 15.4 0.0 6.3 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_14 PF13428.6 gi|568164470|ref|YP_008948003.1| - 1.1e-10 41.4 0.4 0.016 16.0 0.1 5.4 3 1 3 6 6 5 2 Tetratricopeptide repeat TPR_1 PF00515.28 gi|568164470|ref|YP_008948003.1| - 3.1e-10 39.4 15.9 0.43 10.5 0.1 6.4 6 0 0 6 6 6 4 Tetratricopeptide repeat TPR_9 PF13371.6 gi|568164470|ref|YP_008948003.1| - 1.7e-09 37.7 0.0 3.3e-05 24.0 0.0 3.9 2 1 2 4 4 4 1 Tetratricopeptide repeat TPR_12 PF13424.6 gi|568164470|ref|YP_008948003.1| - 1.2e-07 32.0 8.8 0.74 10.1 0.3 5.9 4 3 1 5 5 5 3 Tetratricopeptide repeat TPR_15 PF13429.6 gi|568164470|ref|YP_008948003.1| - 1.8e-05 24.1 0.1 1.1 8.4 0.0 3.9 2 1 2 4 4 4 2 Tetratricopeptide repeat TPR_6 PF13174.6 gi|568164470|ref|YP_008948003.1| - 3.1e-05 24.3 8.9 2.9 8.7 0.0 6.5 7 0 0 7 7 7 1 Tetratricopeptide repeat ChAPs PF09295.10 gi|568164470|ref|YP_008948003.1| - 3.4e-05 23.0 0.3 0.0046 16.0 0.1 2.1 1 1 1 2 2 2 1 ChAPs (Chs5p-Arf1p-binding proteins) SHNi-TPR PF10516.9 gi|568164470|ref|YP_008948003.1| - 6.2e-05 22.4 0.3 4 7.0 0.0 4.7 4 0 0 4 4 4 1 SHNi-TPR SRP_TPR_like PF17004.5 gi|568164470|ref|YP_008948003.1| - 7.1e-05 22.8 9.8 0.014 15.4 7.2 3.1 1 1 1 2 2 2 2 Putative TPR-like repeat NARP1 PF12569.8 gi|568164470|ref|YP_008948003.1| - 9.5e-05 21.5 2.1 0.0028 16.6 0.5 2.7 1 1 2 3 3 3 2 NMDA receptor-regulated protein 1 TPR_20 PF14561.6 gi|568164470|ref|YP_008948003.1| - 0.00014 22.1 0.3 1.7 9.0 0.0 4.3 3 1 3 6 6 6 1 Tetratricopeptide repeat TPR_17 PF13431.6 gi|568164470|ref|YP_008948003.1| - 0.00028 21.0 15.2 1.5 9.4 0.0 6.7 7 1 0 7 7 7 1 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|568164470|ref|YP_008948003.1| - 0.001 18.5 0.1 8.6 5.6 0.0 4.1 2 1 2 4 4 4 0 MalT-like TPR region TPR_7 PF13176.6 gi|568164470|ref|YP_008948003.1| - 0.0056 16.6 0.6 12 6.2 0.0 4.4 5 0 0 5 5 4 0 Tetratricopeptide repeat DUF3856 PF12968.7 gi|568164470|ref|YP_008948003.1| - 0.013 15.6 0.1 0.46 10.6 0.0 2.7 2 0 0 2 2 2 0 Domain of Unknown Function (DUF3856) DUF627 PF04781.12 gi|568164470|ref|YP_008948003.1| - 0.021 14.8 0.1 15 5.7 0.0 3.7 2 1 0 2 2 2 0 Protein of unknown function (DUF627) BTAD PF03704.17 gi|568164470|ref|YP_008948003.1| - 0.026 15.0 0.2 2.3 8.7 0.0 3.0 3 0 0 3 3 3 0 Bacterial transcriptional activator domain YfdX PF10938.8 gi|568164470|ref|YP_008948003.1| - 0.036 14.0 0.0 24 4.8 0.1 3.5 2 1 0 2 2 2 0 YfdX protein HrpB1_HrpK PF09613.10 gi|568164470|ref|YP_008948003.1| - 0.057 13.1 0.0 9.2 5.9 0.0 2.9 1 1 2 3 3 3 0 Bacterial type III secretion protein (HrpB1_HrpK) TPR_21 PF09976.9 gi|568164470|ref|YP_008948003.1| - 0.11 12.2 0.1 0.59 9.8 0.1 2.1 1 1 0 1 1 1 0 Tetratricopeptide repeat-like domain TPR_10 PF13374.6 gi|568164470|ref|YP_008948003.1| - 0.15 11.9 4.5 1.5e+02 2.5 0.0 4.9 5 0 0 5 5 5 0 Tetratricopeptide repeat Mitofilin PF09731.9 gi|568164470|ref|YP_008948003.1| - 0.28 10.0 0.7 0.61 8.8 0.1 1.7 2 0 0 2 2 2 0 Mitochondrial inner membrane protein DUF4363 PF14276.6 gi|568164470|ref|YP_008948003.1| - 0.52 10.4 5.7 13 5.9 0.0 4.0 4 1 1 5 5 4 0 Domain of unknown function (DUF4363) Fis1_TPR_C PF14853.6 gi|568164470|ref|YP_008948003.1| - 0.95 9.6 9.0 3.7 7.7 0.1 4.2 3 1 2 5 5 4 0 Fis1 C-terminal tetratricopeptide repeat Fer4_7 PF12838.7 gi|568164471|ref|YP_008948004.1| - 1e-09 38.8 12.6 0.00077 20.0 0.4 3.6 3 1 0 3 3 3 3 4Fe-4S dicluster domain Fer4 PF00037.27 gi|568164471|ref|YP_008948004.1| - 1.1e-08 34.5 29.0 6.3e-05 22.6 4.1 4.6 5 0 0 5 5 5 3 4Fe-4S binding domain Fer4_6 PF12837.7 gi|568164471|ref|YP_008948004.1| - 4.1e-08 33.0 26.6 0.0005 20.0 5.3 4.0 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_10 PF13237.6 gi|568164471|ref|YP_008948004.1| - 7.1e-08 32.4 18.9 0.00018 21.6 0.8 3.8 3 1 1 4 4 4 3 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|568164471|ref|YP_008948004.1| - 1.7e-07 31.2 10.6 1.2e-06 28.5 5.0 2.8 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|568164471|ref|YP_008948004.1| - 1.2e-05 25.3 4.9 1.2e-05 25.3 4.9 3.5 2 1 2 4 4 4 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|568164471|ref|YP_008948004.1| - 7.7e-05 22.6 26.5 0.0019 18.2 3.5 4.6 5 0 0 5 5 5 3 4Fe-4S binding domain Fer4_8 PF13183.6 gi|568164471|ref|YP_008948004.1| - 0.0058 17.0 16.1 0.27 11.7 1.2 3.7 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|568164471|ref|YP_008948004.1| - 0.023 15.4 13.9 2.9 8.7 9.1 3.5 2 1 0 2 2 2 0 4Fe-4S single cluster domain Fer4_4 PF12800.7 gi|568164471|ref|YP_008948004.1| - 0.025 15.1 2.7 0.025 15.1 2.7 4.6 4 0 0 4 4 4 0 4Fe-4S binding domain CRAL_TRIO PF00650.20 gi|568164471|ref|YP_008948004.1| - 0.046 13.4 0.0 0.12 12.1 0.0 1.6 1 0 0 1 1 1 0 CRAL/TRIO domain Fer4_17 PF13534.6 gi|568164471|ref|YP_008948004.1| - 0.084 13.4 17.4 3.8 8.1 2.1 4.2 2 1 2 4 4 4 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|568164471|ref|YP_008948004.1| - 0.16 12.6 11.1 1.6 9.4 0.6 3.5 3 0 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_16 PF13484.6 gi|568164471|ref|YP_008948004.1| - 0.72 10.8 14.2 1.8 9.6 3.9 3.7 3 1 0 3 3 3 0 4Fe-4S double cluster binding domain DUF678 PF05077.12 gi|568164471|ref|YP_008948004.1| - 4.9 7.3 7.4 29 4.9 0.1 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF678) HAD_2 PF13419.6 gi|568164970|ref|YP_008948005.1| - 0.0016 18.6 0.0 0.0026 17.9 0.0 1.4 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase DUF3313 PF11769.8 gi|568164970|ref|YP_008948005.1| - 0.039 13.8 0.0 1.4 8.7 0.0 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3313) DUF2299 PF10061.9 gi|568164472|ref|YP_008948006.1| - 1.2e-33 115.8 1.3 1.6e-33 115.4 1.3 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2299) Amidoligase_2 PF12224.8 gi|568164472|ref|YP_008948006.1| - 0.0063 16.2 0.0 0.0076 16.0 0.0 1.1 1 0 0 1 1 1 1 Putative amidoligase enzyme NrfD PF03916.14 gi|568164473|ref|YP_008948007.1| - 2.7e-13 50.2 27.9 9.8e-13 48.4 23.5 2.2 2 0 0 2 2 2 2 Polysulphide reductase, NrfD DmsC PF04976.12 gi|568164473|ref|YP_008948007.1| - 0.0018 17.8 14.7 0.0018 17.8 14.7 1.8 2 1 0 2 2 2 1 DMSO reductase anchor subunit (DmsC) DUF1361 PF07099.11 gi|568164473|ref|YP_008948007.1| - 0.0038 17.2 0.1 0.0038 17.2 0.1 2.9 2 2 1 3 3 3 1 Protein of unknown function (DUF1361) MFS_1 PF07690.16 gi|568164474|ref|YP_008948008.1| - 3.9e-16 58.9 37.7 3.9e-16 58.9 37.7 1.4 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|568164474|ref|YP_008948008.1| - 6.4e-13 48.4 27.7 1e-12 47.7 27.7 1.4 1 0 0 1 1 1 1 Sugar (and other) transporter ISK_Channel PF02060.15 gi|568164474|ref|YP_008948008.1| - 0.04 13.6 1.8 0.055 13.2 0.1 2.1 2 0 0 2 2 2 0 Slow voltage-gated potassium channel MFS_1 PF07690.16 gi|568164475|ref|YP_008948009.1| - 1.5e-44 152.3 60.4 4e-28 98.4 18.6 3.4 2 1 1 3 3 3 3 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|568164475|ref|YP_008948009.1| - 1.8e-06 27.1 11.6 1.8e-06 27.1 11.6 3.1 3 0 0 3 3 3 2 Sugar (and other) transporter PUCC PF03209.15 gi|568164475|ref|YP_008948009.1| - 8.8e-05 21.7 3.6 8.8e-05 21.7 3.6 2.8 3 1 0 3 3 3 1 PUCC protein MFS_3 PF05977.13 gi|568164475|ref|YP_008948009.1| - 0.00016 20.2 1.1 0.00016 20.2 1.1 1.9 2 0 0 2 2 2 1 Transmembrane secretion effector MarR PF01047.22 gi|568164476|ref|YP_008948010.1| - 2.2e-11 43.5 0.1 4.4e-11 42.5 0.1 1.6 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|568164476|ref|YP_008948010.1| - 3.1e-09 37.2 0.1 4.9e-09 36.6 0.1 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|568164476|ref|YP_008948010.1| - 1.2e-08 34.7 0.0 1.9e-08 34.1 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.6 gi|568164476|ref|YP_008948010.1| - 0.00022 21.3 0.2 0.00078 19.6 0.0 1.9 2 0 0 2 2 2 1 Winged helix DNA-binding domain HxlR PF01638.17 gi|568164476|ref|YP_008948010.1| - 0.00045 20.0 0.2 0.00087 19.1 0.2 1.6 1 0 0 1 1 1 1 HxlR-like helix-turn-helix TrmB PF01978.19 gi|568164476|ref|YP_008948010.1| - 0.0018 18.1 0.1 0.0032 17.3 0.1 1.6 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB Fe_dep_repress PF01325.19 gi|568164476|ref|YP_008948010.1| - 0.011 15.9 0.0 0.029 14.6 0.0 1.7 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_24 PF13412.6 gi|568164476|ref|YP_008948010.1| - 0.016 14.7 0.1 0.11 12.0 0.0 2.4 2 1 0 2 2 2 0 Winged helix-turn-helix DNA-binding PadR PF03551.14 gi|568164476|ref|YP_008948010.1| - 0.085 12.8 0.2 0.2 11.7 0.1 1.7 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family MFS_1 PF07690.16 gi|568164971|ref|YP_008948011.1| - 1.3e-49 169.1 41.0 1.5e-31 109.6 20.1 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_2 PF13347.6 gi|568164971|ref|YP_008948011.1| - 4.1e-10 38.8 27.1 7.4e-07 28.1 15.5 2.2 1 1 1 2 2 2 2 MFS/sugar transport protein MFS_1_like PF12832.7 gi|568164971|ref|YP_008948011.1| - 1.5e-08 33.9 25.3 3.3e-05 22.9 12.3 2.0 1 1 1 2 2 2 2 MFS_1 like family AgrB PF04647.15 gi|568164971|ref|YP_008948011.1| - 0.002 17.5 2.5 0.002 17.5 2.5 4.0 3 2 0 4 4 4 2 Accessory gene regulator B Flp_Fap PF04964.14 gi|568164971|ref|YP_008948011.1| - 0.13 12.1 1.4 6.2 6.7 0.0 3.0 2 0 0 2 2 2 0 Flp/Fap pilin component HTH_24 PF13412.6 gi|568164477|ref|YP_008948012.1| - 7.6e-19 67.0 5.0 1.6e-13 49.9 0.6 2.3 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|568164477|ref|YP_008948012.1| - 4.6e-12 45.6 0.7 1.6e-08 34.2 0.2 2.3 2 0 0 2 2 2 2 AsnC-type helix-turn-helix domain MarR PF01047.22 gi|568164477|ref|YP_008948012.1| - 2.2e-06 27.5 0.0 0.0049 16.8 0.0 2.3 2 0 0 2 2 2 2 MarR family HTH_Crp_2 PF13545.6 gi|568164477|ref|YP_008948012.1| - 0.00031 20.7 0.0 0.0046 16.9 0.0 2.2 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain MarR_2 PF12802.7 gi|568164477|ref|YP_008948012.1| - 0.001 18.9 0.0 0.056 13.3 0.0 2.2 2 0 0 2 2 2 1 MarR family HTH_5 PF01022.20 gi|568164477|ref|YP_008948012.1| - 0.0011 18.8 0.1 0.77 9.7 0.0 2.6 3 0 0 3 3 3 2 Bacterial regulatory protein, arsR family TFIIE_alpha PF02002.17 gi|568164477|ref|YP_008948012.1| - 0.0023 17.7 2.0 0.57 10.1 0.2 2.9 3 0 0 3 3 3 1 TFIIE alpha subunit TrmB PF01978.19 gi|568164477|ref|YP_008948012.1| - 0.0032 17.3 0.1 1 9.3 0.0 2.7 3 0 0 3 3 3 1 Sugar-specific transcriptional regulator TrmB HTH_7 PF02796.15 gi|568164477|ref|YP_008948012.1| - 0.014 15.5 0.0 3.3 7.9 0.0 2.6 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase HTH_Mga PF08280.11 gi|568164477|ref|YP_008948012.1| - 0.039 14.0 0.2 0.54 10.3 0.1 2.7 3 0 0 3 3 3 0 M protein trans-acting positive regulator (MGA) HTH domain HTH_37 PF13744.6 gi|568164477|ref|YP_008948012.1| - 0.05 13.6 0.0 3.8 7.5 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_17 PF12728.7 gi|568164477|ref|YP_008948012.1| - 0.057 13.6 0.1 3.9 7.8 0.0 2.6 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_28 PF13518.6 gi|568164477|ref|YP_008948012.1| - 0.09 12.9 0.0 5.3 7.3 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_23 PF13384.6 gi|568164477|ref|YP_008948012.1| - 0.11 12.3 0.1 4.3 7.3 0.0 2.5 3 0 0 3 3 3 0 Homeodomain-like domain DUF2079 PF09852.9 gi|568164477|ref|YP_008948012.1| - 0.21 10.4 0.0 0.28 10.0 0.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2079) HTH_Tnp_Tc3_2 PF01498.18 gi|568164478|ref|YP_008948013.1| - 0.15 12.3 0.0 0.21 11.8 0.0 1.2 1 0 0 1 1 1 0 Transposase HTH_10 PF04967.12 gi|568164479|ref|YP_008948014.1| - 3.7e-19 68.3 0.3 1.1e-18 66.7 0.1 1.9 2 0 0 2 2 2 1 HTH DNA binding domain Sigma70_r4 PF04545.16 gi|568164479|ref|YP_008948014.1| - 0.00037 19.9 0.0 0.00079 18.9 0.0 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 Spo0A_C PF08769.11 gi|568164479|ref|YP_008948014.1| - 0.033 14.3 0.2 0.18 11.9 0.0 2.2 2 1 0 2 2 2 0 Sporulation initiation factor Spo0A C terminal DUF5497 PF17601.2 gi|568164479|ref|YP_008948014.1| - 0.11 12.8 5.9 4.6 7.6 1.2 2.4 1 1 1 2 2 2 0 Family of unknown function (DUF5497) Ald_Xan_dh_C2 PF02738.18 gi|568164480|ref|YP_008948015.1| - 9.6e-148 493.0 0.0 1.3e-147 492.6 0.0 1.0 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 gi|568164480|ref|YP_008948015.1| - 2.7e-15 56.7 0.7 1.8e-13 50.8 0.7 2.6 1 1 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DUF3906 PF13046.6 gi|568164480|ref|YP_008948015.1| - 0.99 9.5 3.3 0.62 10.2 0.9 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3906) MFS_1 PF07690.16 gi|568164481|ref|YP_008948016.1| - 1e-11 44.4 35.8 1e-11 44.4 35.8 1.5 1 1 0 1 1 1 1 Major Facilitator Superfamily MbeD_MobD PF04899.12 gi|568164972|ref|YP_008948017.1| - 1.1e-05 25.5 6.7 0.021 14.9 0.0 4.2 1 1 4 5 5 5 1 MbeD/MobD like TelA PF05816.11 gi|568164972|ref|YP_008948017.1| - 1.9e-05 23.9 22.9 0.00021 20.5 22.9 2.2 1 1 0 1 1 1 1 Toxic anion resistance protein (TelA) TMF_DNA_bd PF12329.8 gi|568164972|ref|YP_008948017.1| - 7e-05 22.8 39.0 0.0096 15.9 4.2 4.4 1 1 3 4 4 4 2 TATA element modulatory factor 1 DNA binding TolA_bind_tri PF16331.5 gi|568164972|ref|YP_008948017.1| - 0.00035 20.6 16.7 0.029 14.4 1.3 3.4 1 1 1 3 3 3 2 TolA binding protein trimerisation BLOC1_2 PF10046.9 gi|568164972|ref|YP_008948017.1| - 0.0009 19.5 24.2 0.0046 17.2 8.2 3.3 1 1 2 3 3 3 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 Mt_ATP-synt_B PF05405.14 gi|568164972|ref|YP_008948017.1| - 0.003 17.2 2.5 0.003 17.2 2.5 2.6 1 1 1 2 2 2 1 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) TetR_C_24 PF17932.1 gi|568164972|ref|YP_008948017.1| - 0.0043 17.3 15.7 0.34 11.2 0.4 4.7 1 1 4 5 5 5 1 Tetracyclin repressor-like, C-terminal domain Fib_alpha PF08702.10 gi|568164972|ref|YP_008948017.1| - 0.0051 17.0 23.1 0.21 11.8 11.4 2.5 1 1 1 2 2 2 2 Fibrinogen alpha/beta chain family DUF4200 PF13863.6 gi|568164972|ref|YP_008948017.1| - 0.0073 16.7 36.1 0.41 11.0 16.0 2.5 1 1 1 2 2 2 2 Domain of unknown function (DUF4200) Sigma70_r4 PF04545.16 gi|568164972|ref|YP_008948017.1| - 0.013 15.0 8.5 1.5 8.4 0.4 4.3 1 1 3 4 4 4 0 Sigma-70, region 4 Spc7 PF08317.11 gi|568164972|ref|YP_008948017.1| - 0.014 14.3 30.9 0.29 10.0 10.3 2.2 1 1 1 2 2 2 0 Spc7 kinetochore protein TACC_C PF05010.14 gi|568164972|ref|YP_008948017.1| - 0.015 15.1 26.3 0.2 11.4 14.2 2.5 1 1 1 2 2 2 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal Syntaxin_2 PF14523.6 gi|568164972|ref|YP_008948017.1| - 0.016 15.5 23.8 1 9.7 2.2 4.3 1 1 2 3 3 2 0 Syntaxin-like protein EzrA PF06160.12 gi|568164972|ref|YP_008948017.1| - 0.023 12.9 27.2 0.33 9.1 14.8 2.2 1 1 1 2 2 2 0 Septation ring formation regulator, EzrA DUF948 PF06103.11 gi|568164972|ref|YP_008948017.1| - 0.032 14.5 18.2 14 6.0 0.2 4.2 1 1 3 4 4 4 0 Bacterial protein of unknown function (DUF948) DUF812 PF05667.11 gi|568164972|ref|YP_008948017.1| - 0.063 12.2 27.6 0.12 11.3 27.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF812) HAUS-augmin3 PF14932.6 gi|568164972|ref|YP_008948017.1| - 0.082 12.5 24.5 1.9 8.0 8.8 2.2 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 3 KASH_CCD PF14662.6 gi|568164972|ref|YP_008948017.1| - 0.094 12.5 31.6 0.033 14.0 20.8 2.2 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH V_ATPase_I PF01496.19 gi|568164972|ref|YP_008948017.1| - 0.12 10.2 11.7 0.15 10.0 11.7 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF148 PF02520.17 gi|568164972|ref|YP_008948017.1| - 0.12 12.5 23.3 0.12 12.5 4.1 3.3 1 1 2 3 3 3 0 Domain of unknown function DUF148 AAA_13 PF13166.6 gi|568164972|ref|YP_008948017.1| - 0.16 10.6 27.3 0.72 8.4 10.6 2.1 1 1 1 2 2 2 0 AAA domain DUF4473 PF14747.6 gi|568164972|ref|YP_008948017.1| - 0.16 12.6 17.0 1.1 9.9 3.5 3.6 1 1 2 3 3 3 0 Domain of unknown function (DUF4473) DUF1759 PF03564.15 gi|568164972|ref|YP_008948017.1| - 0.18 11.8 15.2 0.77 9.7 0.7 3.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1759) ATG16 PF08614.11 gi|568164972|ref|YP_008948017.1| - 0.22 11.8 27.9 2 8.6 11.1 2.7 1 1 2 3 3 3 0 Autophagy protein 16 (ATG16) YaiA PF16362.5 gi|568164972|ref|YP_008948017.1| - 0.22 11.7 1.3 79 3.5 0.1 3.3 1 1 3 4 4 4 0 YaiA protein NanE PF04131.14 gi|568164972|ref|YP_008948017.1| - 0.23 10.6 5.0 1 8.5 0.8 2.4 1 1 1 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase CALCOCO1 PF07888.11 gi|568164972|ref|YP_008948017.1| - 0.27 10.1 29.4 0.35 9.7 29.4 1.1 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like CDPS PF16715.5 gi|568164972|ref|YP_008948017.1| - 0.27 10.8 6.9 0.54 9.9 6.5 1.7 1 1 0 1 1 1 0 Cyclodipeptide synthase Vps39_1 PF10366.9 gi|568164972|ref|YP_008948017.1| - 0.28 11.5 5.3 1.2 9.4 4.6 2.2 1 1 1 2 2 2 0 Vacuolar sorting protein 39 domain 1 TMP_2 PF06791.13 gi|568164972|ref|YP_008948017.1| - 0.29 10.8 10.1 1.1 8.9 7.5 2.5 1 1 1 2 2 2 0 Prophage tail length tape measure protein DUF2935 PF11155.8 gi|568164972|ref|YP_008948017.1| - 0.29 11.5 14.3 1.8 8.9 5.3 3.0 1 1 1 2 2 2 0 Domain of unknown function (DUF2935) TusA PF01206.17 gi|568164972|ref|YP_008948017.1| - 0.37 10.6 4.4 1.4 8.8 0.0 3.3 2 1 2 4 4 4 0 Sulfurtransferase TusA ARGLU PF15346.6 gi|568164972|ref|YP_008948017.1| - 0.44 10.4 38.7 0.33 10.8 15.9 2.3 1 1 1 2 2 2 0 Arginine and glutamate-rich 1 TPR_MLP1_2 PF07926.12 gi|568164972|ref|YP_008948017.1| - 0.72 9.9 29.7 0.82 9.7 14.2 2.5 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein WDCP PF15390.6 gi|568164972|ref|YP_008948017.1| - 0.76 8.1 10.4 0.91 7.8 10.4 1.2 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family Fez1 PF06818.15 gi|568164972|ref|YP_008948017.1| - 0.76 10.2 26.0 1 9.8 24.5 1.8 1 1 1 2 2 2 0 Fez1 YccJ PF13993.6 gi|568164972|ref|YP_008948017.1| - 0.89 9.9 9.1 30 5.1 0.4 3.8 1 1 3 4 4 4 0 YccJ-like protein DUF3782 PF12644.7 gi|568164972|ref|YP_008948017.1| - 0.93 9.7 25.9 6.6e+02 0.6 0.2 5.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3782) MCPsignal PF00015.21 gi|568164972|ref|YP_008948017.1| - 0.97 9.2 19.8 34 4.2 12.6 2.8 1 1 2 3 3 3 0 Methyl-accepting chemotaxis protein (MCP) signalling domain DUF763 PF05559.11 gi|568164972|ref|YP_008948017.1| - 1.1 8.3 11.2 2 7.5 11.2 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF763) CcdA PF07362.12 gi|568164972|ref|YP_008948017.1| - 1.1 9.7 17.9 27 5.3 0.6 4.6 1 1 3 4 4 4 0 Post-segregation antitoxin CcdA SpecificRecomb PF10136.9 gi|568164972|ref|YP_008948017.1| - 1.4 7.2 11.7 1.5 7.0 7.0 1.6 1 1 1 2 2 2 0 Site-specific recombinase GnsAB_toxin PF08178.11 gi|568164972|ref|YP_008948017.1| - 1.4 8.9 24.6 75 3.4 3.4 7.0 1 1 4 5 5 5 0 GnsA/GnsB toxin of bacterial toxin-antitoxin system SfsA PF03749.13 gi|568164972|ref|YP_008948017.1| - 1.5 8.7 11.3 54 3.7 0.1 4.4 2 1 1 3 3 3 0 Sugar fermentation stimulation protein RE domain DUF3734 PF12536.8 gi|568164972|ref|YP_008948017.1| - 1.8 8.9 11.1 9.2 6.7 0.9 3.2 1 1 3 4 4 4 0 Patatin phospholipase TMPIT PF07851.13 gi|568164972|ref|YP_008948017.1| - 2.7 7.2 22.9 1.6 7.9 8.3 2.3 1 1 1 2 2 2 0 TMPIT-like protein COG2 PF06148.11 gi|568164972|ref|YP_008948017.1| - 2.8 8.0 17.1 3e+03 -1.8 16.9 3.1 1 1 0 1 1 0 0 COG (conserved oligomeric Golgi) complex component, COG2 ALMT PF11744.8 gi|568164972|ref|YP_008948017.1| - 3 6.6 13.3 4.4 6.0 13.3 1.3 1 0 0 1 1 1 0 Aluminium activated malate transporter Het-C PF07217.11 gi|568164972|ref|YP_008948017.1| - 3.6 6.0 11.9 6.8 5.1 11.9 1.5 1 1 0 1 1 1 0 Heterokaryon incompatibility protein Het-C DUF4201 PF13870.6 gi|568164972|ref|YP_008948017.1| - 5.6 6.7 31.2 9.1 6.0 14.6 2.7 1 1 2 3 3 3 0 Domain of unknown function (DUF4201) Spc29 PF17082.5 gi|568164972|ref|YP_008948017.1| - 5.8 6.7 15.4 28 4.4 13.7 2.1 1 1 1 2 2 2 0 Spindle Pole Component 29 GAS PF13851.6 gi|568164972|ref|YP_008948017.1| - 5.8 6.2 33.5 8.2 5.7 24.2 2.4 1 1 1 2 2 2 0 Growth-arrest specific micro-tubule binding FAR1 PF03101.15 gi|568164972|ref|YP_008948017.1| - 5.9 7.7 5.8 69 4.2 0.6 3.0 1 1 2 3 3 3 0 FAR1 DNA-binding domain Mod_r PF07200.13 gi|568164972|ref|YP_008948017.1| - 6.4 6.9 25.3 1.5 9.0 1.7 3.2 1 1 1 2 2 1 0 Modifier of rudimentary (Mod(r)) protein PocR PF10114.9 gi|568164972|ref|YP_008948017.1| - 6.5 6.5 11.9 20 5.0 1.0 3.7 1 1 3 4 4 4 0 Sensory domain found in PocR Atx10homo_assoc PF09759.9 gi|568164972|ref|YP_008948017.1| - 7.5 6.7 15.6 8.6 6.4 1.4 4.1 2 1 5 8 8 7 0 Spinocerebellar ataxia type 10 protein domain APG6_N PF17675.1 gi|568164972|ref|YP_008948017.1| - 7.6 7.1 31.9 42 4.7 17.6 2.6 1 1 1 2 2 2 0 Apg6 coiled-coil region DUF2584 PF10763.9 gi|568164972|ref|YP_008948017.1| - 8 6.7 15.1 6 7.1 0.6 3.9 1 1 3 4 4 4 0 Protein of unknown function (DUF2584) Ada3 PF10198.9 gi|568164972|ref|YP_008948017.1| - 8 6.6 26.0 7.7 6.7 1.4 4.3 1 1 3 4 4 4 0 Histone acetyltransferases subunit 3 AdoHcyase PF05221.17 gi|568164972|ref|YP_008948017.1| - 8.7 5.4 14.5 7.3 5.6 5.0 2.6 1 1 1 2 2 2 0 S-adenosyl-L-homocysteine hydrolase DUF3574 PF12098.8 gi|568164972|ref|YP_008948017.1| - 9 6.1 8.3 32 4.4 0.7 3.2 1 1 2 3 3 3 0 Protein of unknown function (DUF3574) Sulfatase_C PF14707.6 gi|568164972|ref|YP_008948017.1| - 9.7 6.9 7.9 6.8e+02 1.0 7.1 3.0 1 1 1 2 2 2 0 C-terminal region of aryl-sulfatase ABC_tran PF00005.27 gi|568164482|ref|YP_008948018.1| - 3.2e-29 102.2 0.0 5.7e-29 101.4 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|568164482|ref|YP_008948018.1| - 7.9e-11 42.3 0.1 3.4e-05 23.8 0.5 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|568164482|ref|YP_008948018.1| - 1.9e-07 30.8 2.4 1.2e-06 28.1 2.2 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|568164482|ref|YP_008948018.1| - 5.9e-05 23.0 1.1 0.0082 16.1 0.0 2.5 3 0 0 3 3 3 1 RsgA GTPase AAA_29 PF13555.6 gi|568164482|ref|YP_008948018.1| - 0.00012 21.8 0.1 0.00024 20.8 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_ATPase PF09818.9 gi|568164482|ref|YP_008948018.1| - 0.00025 20.0 0.6 0.057 12.2 0.1 2.6 2 1 0 2 2 2 2 Predicted ATPase of the ABC class AAA_23 PF13476.6 gi|568164482|ref|YP_008948018.1| - 0.00075 20.1 0.8 0.0021 18.6 0.8 1.9 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|568164482|ref|YP_008948018.1| - 0.0015 18.3 1.9 0.069 12.9 0.3 2.1 1 1 0 2 2 2 1 AAA ATPase domain TsaE PF02367.17 gi|568164482|ref|YP_008948018.1| - 0.038 14.0 0.0 0.14 12.2 0.0 1.9 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_30 PF13604.6 gi|568164482|ref|YP_008948018.1| - 0.049 13.4 0.0 0.42 10.3 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_10 PF12846.7 gi|568164482|ref|YP_008948018.1| - 0.066 12.1 1.2 0.16 10.9 1.2 1.8 1 1 0 1 1 1 0 AAA-like domain AAA_16 PF13191.6 gi|568164482|ref|YP_008948018.1| - 0.12 12.8 0.0 0.18 12.1 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain MMR_HSR1 PF01926.23 gi|568164482|ref|YP_008948018.1| - 0.13 12.4 0.2 0.19 11.8 0.2 1.8 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_25 PF13481.6 gi|568164482|ref|YP_008948018.1| - 0.15 11.6 0.4 0.66 9.5 0.1 2.0 2 1 0 2 2 2 0 AAA domain BPD_transp_2 PF02653.16 gi|568164483|ref|YP_008948019.1| - 2.9e-30 105.4 35.8 4.1e-30 104.8 35.8 1.2 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component Peripla_BP_4 PF13407.6 gi|568164484|ref|YP_008948020.1| - 6.9e-46 156.9 0.3 1.2e-45 156.1 0.3 1.3 1 0 0 1 1 1 1 Periplasmic binding protein domain Peripla_BP_1 PF00532.21 gi|568164484|ref|YP_008948020.1| - 4.9e-05 22.9 0.0 8.4e-05 22.1 0.0 1.4 1 1 0 1 1 1 1 Periplasmic binding proteins and sugar binding domain of LacI family Glyco_hydro_2_N PF02837.18 gi|568164484|ref|YP_008948020.1| - 0.079 12.9 0.0 0.3 10.9 0.0 1.9 2 0 0 2 2 2 0 Glycosyl hydrolases family 2, sugar binding domain ABC_membrane PF00664.23 gi|568164485|ref|YP_008948021.1| - 8.7e-47 160.0 10.0 1.2e-46 159.6 10.0 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 gi|568164485|ref|YP_008948021.1| - 1.7e-34 119.3 0.0 3.5e-34 118.2 0.0 1.6 1 0 0 1 1 1 1 ABC transporter DUF1854 PF08909.11 gi|568164485|ref|YP_008948021.1| - 2.1e-30 105.2 0.4 1.7e-29 102.2 0.1 2.4 2 0 0 2 2 2 1 Domain of unknown function (DUF1854) SMC_N PF02463.19 gi|568164485|ref|YP_008948021.1| - 2.8e-06 26.9 0.5 0.00099 18.6 0.0 2.5 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|568164485|ref|YP_008948021.1| - 3.6e-05 23.7 0.0 0.34 10.7 0.0 2.8 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system ABC_membrane_3 PF13748.6 gi|568164485|ref|YP_008948021.1| - 0.00018 20.8 8.8 0.0002 20.6 4.9 2.4 2 1 0 2 2 2 1 ABC transporter transmembrane region AAA_22 PF13401.6 gi|568164485|ref|YP_008948021.1| - 0.0031 17.8 0.5 0.066 13.5 0.2 3.0 2 1 0 2 2 2 1 AAA domain DUF87 PF01935.17 gi|568164485|ref|YP_008948021.1| - 0.0034 17.5 0.3 0.012 15.8 0.1 2.1 2 0 0 2 2 1 1 Helicase HerA, central domain AAA_29 PF13555.6 gi|568164485|ref|YP_008948021.1| - 0.0035 17.1 0.1 0.0097 15.6 0.1 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 gi|568164485|ref|YP_008948021.1| - 0.0037 17.0 3.0 0.023 14.4 3.0 2.5 1 1 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 gi|568164485|ref|YP_008948021.1| - 0.0077 16.7 0.6 1.1 9.7 0.1 3.1 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_10 PF12846.7 gi|568164485|ref|YP_008948021.1| - 0.014 14.3 1.2 0.56 9.1 0.1 2.8 3 0 0 3 3 3 0 AAA-like domain AAA_24 PF13479.6 gi|568164485|ref|YP_008948021.1| - 0.02 14.7 1.4 0.033 13.9 0.4 2.0 2 1 0 2 2 2 0 AAA domain AAA_18 PF13238.6 gi|568164485|ref|YP_008948021.1| - 0.027 15.0 0.0 0.086 13.4 0.0 1.9 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|568164485|ref|YP_008948021.1| - 0.031 14.7 1.1 0.55 10.6 0.1 2.6 2 1 0 2 2 2 0 RNA helicase AAA_16 PF13191.6 gi|568164485|ref|YP_008948021.1| - 0.048 14.0 0.0 0.38 11.1 0.0 2.3 2 0 0 2 2 2 0 AAA ATPase domain RsgA_GTPase PF03193.16 gi|568164485|ref|YP_008948021.1| - 0.062 13.2 0.1 0.39 10.6 0.0 2.2 2 0 0 2 2 2 0 RsgA GTPase MMR_HSR1 PF01926.23 gi|568164485|ref|YP_008948021.1| - 0.062 13.4 0.1 0.18 11.9 0.1 1.8 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_5 PF07728.14 gi|568164485|ref|YP_008948021.1| - 0.1 12.6 0.0 0.66 10.0 0.0 2.4 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Roc PF08477.13 gi|568164485|ref|YP_008948021.1| - 0.12 12.6 0.1 0.83 9.9 0.1 2.4 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase Amidohydro_2 PF04909.14 gi|568164486|ref|YP_008948022.1| - 2.8e-35 122.5 1.0 6.1e-35 121.4 1.0 1.5 1 1 0 1 1 1 1 Amidohydrolase Sulfotransfer_3 PF13469.6 gi|568164486|ref|YP_008948022.1| - 0.061 13.7 0.0 0.12 12.8 0.0 1.5 1 0 0 1 1 1 0 Sulfotransferase family CARD PF00619.21 gi|568164487|ref|YP_008948023.1| - 0.0016 18.4 0.2 0.0021 18.0 0.2 1.2 1 0 0 1 1 1 1 Caspase recruitment domain HP1451_C PF18472.1 gi|568164487|ref|YP_008948023.1| - 0.15 12.1 0.0 0.31 11.1 0.0 1.5 1 0 0 1 1 1 0 HP1451 C-terminal domain ADH_N PF08240.12 gi|568164488|ref|YP_008948024.1| - 4.9e-30 103.6 0.1 1.1e-29 102.5 0.1 1.6 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|568164488|ref|YP_008948024.1| - 1.1e-25 90.2 0.2 1.6e-25 89.5 0.2 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|568164488|ref|YP_008948024.1| - 1e-11 46.0 0.0 1.9e-11 45.1 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 gi|568164488|ref|YP_008948024.1| - 3e-05 23.6 0.4 4.6e-05 23.0 0.4 1.3 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus TrkA_N PF02254.18 gi|568164488|ref|YP_008948024.1| - 0.00082 19.6 0.8 0.0017 18.6 0.8 1.5 1 0 0 1 1 1 1 TrkA-N domain Methyltransf_31 PF13847.6 gi|568164488|ref|YP_008948024.1| - 0.022 14.5 0.3 0.039 13.7 0.3 1.6 1 1 0 1 1 1 0 Methyltransferase domain DapB_N PF01113.20 gi|568164488|ref|YP_008948024.1| - 0.046 13.8 1.0 0.085 13.0 1.0 1.4 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus Urocanase PF01175.18 gi|568164488|ref|YP_008948024.1| - 0.078 12.6 0.4 0.14 11.8 0.2 1.5 2 0 0 2 2 2 0 Urocanase Rossmann-like domain Methyltransf_25 PF13649.6 gi|568164488|ref|YP_008948024.1| - 0.12 13.1 0.0 0.3 11.8 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain CoA_binding PF02629.19 gi|568164488|ref|YP_008948024.1| - 0.48 11.1 4.0 13 6.6 3.8 2.5 2 1 0 2 2 2 0 CoA binding domain MFS_1 PF07690.16 gi|568164489|ref|YP_008948025.1| - 1.3e-22 80.2 43.8 1.8e-22 79.7 43.8 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|568164489|ref|YP_008948025.1| - 2.2e-12 46.6 28.5 6.9e-07 28.5 6.1 2.4 1 1 0 2 2 2 2 Sugar (and other) transporter DUF3792 PF12670.7 gi|568164489|ref|YP_008948025.1| - 0.02 15.0 14.8 0.02 15.0 14.8 4.6 3 1 1 4 4 4 0 Protein of unknown function (DUF3792) Peptidase_S58 PF03576.14 gi|568164490|ref|YP_008948027.1| - 1.2e-30 107.1 1.8 1.4e-30 106.9 1.8 1.0 1 0 0 1 1 1 1 Peptidase family S58 MFS_1 PF07690.16 gi|568164491|ref|YP_008948028.1| - 8.7e-20 70.9 70.8 1.1e-17 64.0 40.0 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily adh_short_C2 PF13561.6 gi|568164492|ref|YP_008948029.1| - 2.7e-68 230.0 0.0 3.1e-68 229.8 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|568164492|ref|YP_008948029.1| - 4.2e-49 166.7 0.4 5e-49 166.4 0.4 1.0 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|568164492|ref|YP_008948029.1| - 4.8e-14 52.7 0.1 7e-14 52.1 0.1 1.2 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 gi|568164492|ref|YP_008948029.1| - 1.8e-05 24.3 0.0 2.5e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 Fungal family of unknown function (DUF1776) 3HCDH_N PF02737.18 gi|568164492|ref|YP_008948029.1| - 0.00057 19.8 0.0 0.00083 19.3 0.0 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Methyltransf_25 PF13649.6 gi|568164492|ref|YP_008948029.1| - 0.00072 20.2 0.0 0.0012 19.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain THF_DHG_CYH_C PF02882.19 gi|568164492|ref|YP_008948029.1| - 0.0034 16.7 0.0 0.012 14.9 0.0 1.8 2 0 0 2 2 2 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Epimerase PF01370.21 gi|568164492|ref|YP_008948029.1| - 0.013 14.9 0.7 0.17 11.3 0.7 2.2 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family HEM4 PF02602.15 gi|568164492|ref|YP_008948029.1| - 0.12 11.7 0.0 0.24 10.7 0.0 1.5 1 0 0 1 1 1 0 Uroporphyrinogen-III synthase HemD Peptidase_M20 PF01546.28 gi|568164493|ref|YP_008948030.1| - 1.7e-37 129.2 0.0 9.4e-37 126.7 0.0 1.8 2 0 0 2 2 2 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|568164493|ref|YP_008948030.1| - 3.1e-20 72.1 0.0 9e-20 70.6 0.0 1.8 2 0 0 2 2 2 1 Peptidase dimerisation domain Peptidase_M20 PF01546.28 gi|568164494|ref|YP_008948031.1| - 1.9e-31 109.4 0.0 2.3e-31 109.1 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 Peptidase_M28 PF04389.17 gi|568164494|ref|YP_008948031.1| - 1.6e-06 27.9 0.0 2.8e-06 27.2 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M28 M20_dimer PF07687.14 gi|568164494|ref|YP_008948031.1| - 3.4e-06 26.9 0.0 7.1e-06 25.9 0.0 1.6 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M42 PF05343.14 gi|568164494|ref|YP_008948031.1| - 0.0081 15.2 0.1 1.3 8.0 0.1 2.3 2 0 0 2 2 2 2 M42 glutamyl aminopeptidase MFS_1 PF07690.16 gi|568164495|ref|YP_008948032.1| - 6.4e-28 97.7 45.3 1.1e-27 96.9 45.3 1.3 1 0 0 1 1 1 1 Major Facilitator Superfamily Arginase PF00491.21 gi|568164496|ref|YP_008948033.1| - 1.1e-77 261.3 0.0 1.3e-77 261.1 0.0 1.0 1 0 0 1 1 1 1 Arginase family YkyA PF10368.9 gi|568164974|ref|YP_008948034.1| - 0.0083 15.8 7.3 0.013 15.1 7.3 1.4 1 0 0 1 1 1 1 Putative cell-wall binding lipoprotein DUF1640 PF07798.11 gi|568164974|ref|YP_008948034.1| - 0.041 13.9 4.7 0.03 14.4 2.9 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1640) APC_N_CC PF16689.5 gi|568164974|ref|YP_008948034.1| - 0.085 12.9 0.8 4.7 7.4 0.3 3.3 2 1 0 2 2 2 0 Coiled-coil N-terminus of APC, dimerisation domain Sec2p PF06428.11 gi|568164974|ref|YP_008948034.1| - 0.14 12.2 6.4 1.7 8.7 0.8 2.7 2 1 1 3 3 3 0 GDP/GTP exchange factor Sec2p RsgA_GTPase PF03193.16 gi|568164974|ref|YP_008948034.1| - 0.15 12.0 2.8 0.26 11.2 2.8 1.3 1 0 0 1 1 1 0 RsgA GTPase Tup_N PF08581.10 gi|568164974|ref|YP_008948034.1| - 0.19 12.0 6.1 0.091 13.1 2.7 2.2 2 0 0 2 2 2 0 Tup N-terminal DUF1664 PF07889.12 gi|568164974|ref|YP_008948034.1| - 0.91 9.6 5.5 2.1 8.4 1.2 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) SKA2 PF16740.5 gi|568164974|ref|YP_008948034.1| - 0.92 9.3 5.9 0.22 11.3 1.5 2.2 2 1 0 2 2 2 0 Spindle and kinetochore-associated protein 2 HTH_24 PF13412.6 gi|568164497|ref|YP_008948035.1| - 2.7e-15 55.7 2.1 4.2e-15 55.0 2.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|568164497|ref|YP_008948035.1| - 1.1e-13 50.8 0.4 1.6e-13 50.2 0.4 1.3 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain AsnC_trans_reg PF01037.21 gi|568164497|ref|YP_008948035.1| - 4.4e-12 45.8 0.0 7e-12 45.2 0.0 1.4 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain MarR PF01047.22 gi|568164497|ref|YP_008948035.1| - 2.8e-05 24.0 0.1 5.7e-05 23.0 0.1 1.5 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.20 gi|568164497|ref|YP_008948035.1| - 5.5e-05 22.9 0.2 0.00012 21.9 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|568164497|ref|YP_008948035.1| - 0.00011 22.2 0.0 0.00018 21.5 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|568164497|ref|YP_008948035.1| - 0.00054 19.8 0.1 0.0014 18.5 0.0 1.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.6 gi|568164497|ref|YP_008948035.1| - 0.0008 19.9 0.1 0.0021 18.5 0.1 1.7 1 0 0 1 1 1 1 Winged helix DNA-binding domain RuvB_C PF05491.13 gi|568164497|ref|YP_008948035.1| - 0.0016 18.3 0.3 0.0049 16.7 0.3 1.8 2 0 0 2 2 2 1 RuvB C-terminal winged helix domain MarR_2 PF12802.7 gi|568164497|ref|YP_008948035.1| - 0.0016 18.3 0.0 0.003 17.4 0.0 1.3 1 0 0 1 1 1 1 MarR family DUF2250 PF10007.9 gi|568164497|ref|YP_008948035.1| - 0.0039 17.3 1.5 0.082 13.0 0.2 2.6 2 1 1 3 3 3 1 Uncharacterized protein conserved in archaea (DUF2250) DUF1759 PF03564.15 gi|568164497|ref|YP_008948035.1| - 0.0043 17.0 0.6 0.0076 16.2 0.1 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF1759) HTH_IclR PF09339.10 gi|568164497|ref|YP_008948035.1| - 0.0079 16.0 0.0 0.013 15.3 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain DDRGK PF09756.9 gi|568164497|ref|YP_008948035.1| - 0.012 15.2 0.1 0.02 14.5 0.1 1.3 1 0 0 1 1 1 0 DDRGK domain HTH_WhiA PF02650.14 gi|568164497|ref|YP_008948035.1| - 0.029 14.7 1.8 0.045 14.1 0.6 1.8 2 0 0 2 2 2 0 WhiA C-terminal HTH domain TFIIE_alpha PF02002.17 gi|568164497|ref|YP_008948035.1| - 0.032 14.1 0.1 0.061 13.2 0.1 1.5 1 0 0 1 1 1 0 TFIIE alpha subunit DUF3400 PF11880.8 gi|568164497|ref|YP_008948035.1| - 0.039 13.5 0.0 0.65 9.6 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3400) HTH_11 PF08279.12 gi|568164497|ref|YP_008948035.1| - 0.05 13.5 0.3 0.05 13.5 0.3 1.9 2 0 0 2 2 2 0 HTH domain HTH_Crp_2 PF13545.6 gi|568164497|ref|YP_008948035.1| - 0.11 12.4 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_30 PF13556.6 gi|568164497|ref|YP_008948035.1| - 0.13 12.1 0.0 0.21 11.4 0.0 1.3 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain Aminotran_3 PF00202.21 gi|568164498|ref|YP_008948036.1| - 4.1e-91 305.7 0.0 5e-91 305.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III EamA PF00892.20 gi|568164499|ref|YP_008948037.1| - 5e-32 110.9 31.0 2.2e-18 66.8 13.1 2.5 2 1 0 2 2 2 2 EamA-like transporter family B_solenoid_ydck PF18836.1 gi|568164499|ref|YP_008948037.1| - 0.13 12.2 0.0 0.34 10.8 0.0 1.7 1 0 0 1 1 1 0 Beta solenoid repeat from YDCK Vpu PF00558.19 gi|568164499|ref|YP_008948037.1| - 0.45 10.3 0.0 0.45 10.3 0.0 2.2 2 1 0 2 2 2 0 Vpu protein IF3_N PF05198.16 gi|568164500|ref|YP_008948038.1| - 0.056 13.7 0.1 0.088 13.1 0.1 1.5 1 0 0 1 1 1 0 Translation initiation factor IF-3, N-terminal domain Rad50_zn_hook PF04423.14 gi|568164500|ref|YP_008948038.1| - 0.32 10.9 0.1 0.32 10.9 0.1 2.6 2 1 1 3 3 3 0 Rad50 zinc hook motif PTE PF02126.18 gi|568164501|ref|YP_008948039.1| - 3.9e-82 276.0 0.0 4.4e-82 275.8 0.0 1.0 1 0 0 1 1 1 1 Phosphotriesterase family Gln-synt_C PF00120.24 gi|568164502|ref|YP_008948040.1| - 1.3e-107 359.7 0.0 2.6e-107 358.8 0.0 1.4 1 1 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N_2 PF16952.5 gi|568164502|ref|YP_008948040.1| - 1.2e-09 38.0 0.0 2e-09 37.3 0.0 1.4 1 0 0 1 1 1 1 Glutamine synthetase N-terminal domain Amidohydro_2 PF04909.14 gi|568164503|ref|YP_008948041.1| - 1.7e-32 113.4 0.0 2.2e-32 113.0 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase TatD_DNase PF01026.21 gi|568164503|ref|YP_008948041.1| - 0.00062 19.2 0.0 0.00078 18.9 0.0 1.2 1 0 0 1 1 1 1 TatD related DNase HpaB_N PF11794.8 gi|568164504|ref|YP_008948042.1| - 3.3e-91 305.7 0.1 4.6e-91 305.3 0.1 1.2 1 0 0 1 1 1 1 4-hydroxyphenylacetate 3-hydroxylase N terminal HpaB PF03241.13 gi|568164504|ref|YP_008948042.1| - 6.5e-65 218.0 0.1 8.9e-65 217.6 0.1 1.2 1 0 0 1 1 1 1 4-hydroxyphenylacetate 3-hydroxylase C terminal Acyl-CoA_dh_M PF02770.19 gi|568164504|ref|YP_008948042.1| - 0.02 15.1 0.0 0.041 14.1 0.0 1.5 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_1 PF00441.24 gi|568164504|ref|YP_008948042.1| - 0.025 14.8 0.1 0.047 13.9 0.1 1.4 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase, C-terminal domain Pyr_redox_2 PF07992.14 gi|568164505|ref|YP_008948043.1| - 8.3e-30 104.0 0.1 1.2e-29 103.5 0.1 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|568164505|ref|YP_008948043.1| - 3.8e-24 85.5 0.1 4.1e-21 75.5 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|568164505|ref|YP_008948043.1| - 8.3e-13 48.7 0.1 1.3e-09 38.5 0.0 2.5 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 gi|568164505|ref|YP_008948043.1| - 1.1e-08 34.6 0.2 1.5e-06 27.6 0.0 2.9 2 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) HI0933_like PF03486.14 gi|568164505|ref|YP_008948043.1| - 6.6e-08 31.7 0.0 0.0017 17.2 0.0 3.4 4 0 0 4 4 4 2 HI0933-like protein NAD_binding_8 PF13450.6 gi|568164505|ref|YP_008948043.1| - 2.3e-05 24.5 0.1 0.0002 21.5 0.1 2.3 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|568164505|ref|YP_008948043.1| - 7.9e-05 22.4 1.8 0.036 13.6 0.2 3.5 2 1 2 4 4 4 1 FAD dependent oxidoreductase FAD_oxidored PF12831.7 gi|568164505|ref|YP_008948043.1| - 0.00016 21.1 0.3 0.0012 18.3 0.0 2.3 3 0 0 3 3 3 1 FAD dependent oxidoreductase Thi4 PF01946.17 gi|568164505|ref|YP_008948043.1| - 0.00033 20.0 0.8 0.031 13.5 0.1 3.4 3 1 1 4 4 4 1 Thi4 family NAD_binding_7 PF13241.6 gi|568164505|ref|YP_008948043.1| - 0.0013 19.1 0.5 0.014 15.8 0.1 2.5 2 1 0 2 2 2 1 Putative NAD(P)-binding FMO-like PF00743.19 gi|568164505|ref|YP_008948043.1| - 0.0023 16.5 0.1 0.011 14.2 0.0 2.0 2 0 0 2 2 2 1 Flavin-binding monooxygenase-like NAD_binding_9 PF13454.6 gi|568164505|ref|YP_008948043.1| - 0.035 14.1 1.7 12 5.9 0.0 3.6 3 1 1 4 4 4 0 FAD-NAD(P)-binding Spermine_synth PF01564.17 gi|568164505|ref|YP_008948043.1| - 0.046 13.1 0.2 0.33 10.3 0.1 2.0 2 0 0 2 2 2 0 Spermine/spermidine synthase domain FAD_binding_2 PF00890.24 gi|568164505|ref|YP_008948043.1| - 0.1 11.7 2.4 7.5 5.5 0.0 3.2 2 1 1 3 3 3 0 FAD binding domain ADH_N PF08240.12 gi|568164506|ref|YP_008948044.1| - 2e-29 101.7 1.2 2e-29 101.7 1.2 1.8 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|568164506|ref|YP_008948044.1| - 4.7e-28 97.8 0.2 9.4e-28 96.8 0.1 1.6 2 0 0 2 2 2 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 gi|568164506|ref|YP_008948044.1| - 7.5e-10 38.6 0.1 1.2e-09 38.0 0.1 1.3 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 gi|568164506|ref|YP_008948044.1| - 9.5e-05 23.5 0.0 0.00027 22.0 0.0 1.7 2 0 0 2 2 2 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 gi|568164506|ref|YP_008948044.1| - 0.0066 15.8 2.4 0.058 12.7 1.1 2.3 1 1 1 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain Sacchrp_dh_NADP PF03435.18 gi|568164506|ref|YP_008948044.1| - 0.0075 16.5 0.2 0.014 15.6 0.2 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain 2-Hacid_dh_C PF02826.19 gi|568164506|ref|YP_008948044.1| - 0.04 13.3 0.2 0.073 12.4 0.2 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMP-binding_C_2 PF14535.6 gi|568164507|ref|YP_008948045.1| - 1.4e-13 51.0 0.0 2.4e-13 50.2 0.0 1.4 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 gi|568164507|ref|YP_008948045.1| - 0.00075 18.2 0.4 0.0024 16.6 0.4 1.6 1 1 0 1 1 1 1 AMP-binding enzyme Glyco_transf_11 PF01531.16 gi|568164507|ref|YP_008948045.1| - 0.084 12.1 0.0 0.14 11.3 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferase family 11 Semialdhyde_dh PF01118.24 gi|568164508|ref|YP_008948046.1| - 1.5e-30 106.2 0.0 2.9e-30 105.2 0.0 1.5 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.18 gi|568164508|ref|YP_008948046.1| - 1.5e-21 77.3 0.0 2.4e-21 76.6 0.0 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Gp_dh_C PF02800.20 gi|568164508|ref|YP_008948046.1| - 0.0035 16.9 0.1 0.012 15.2 0.1 1.9 2 0 0 2 2 2 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMP-binding PF00501.28 gi|568164509|ref|YP_008948047.1| - 3.5e-102 342.1 0.0 4.3e-102 341.9 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|568164509|ref|YP_008948047.1| - 1.8e-18 67.3 0.1 4e-18 66.2 0.1 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain FAA_hydrolase PF01557.18 gi|568164511|ref|YP_008948051.1| - 1.3e-56 191.8 0.0 1.6e-56 191.5 0.0 1.1 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family Lactamase_B PF00753.27 gi|568164512|ref|YP_008948052.1| - 6.2e-26 91.6 0.5 2e-25 90.0 0.5 1.7 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily TauE PF01925.19 gi|568164513|ref|YP_008948053.1| - 1.3e-19 70.8 13.2 1.9e-19 70.2 13.2 1.2 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE FmdA_AmdA PF03069.15 gi|568164514|ref|YP_008948054.1| - 1.6e-68 231.3 0.0 3.1e-42 144.8 0.0 2.0 1 1 1 2 2 2 2 Acetamidase/Formamidase family Acetyltransf_10 PF13673.7 gi|568164515|ref|YP_008948055.1| - 1.6e-16 60.4 0.0 2e-16 60.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|568164515|ref|YP_008948055.1| - 3.2e-16 59.6 0.0 3.8e-16 59.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|568164515|ref|YP_008948055.1| - 4.1e-16 59.2 0.0 5.7e-16 58.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|568164515|ref|YP_008948055.1| - 3.4e-11 43.5 0.1 4.1e-11 43.3 0.1 1.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|568164515|ref|YP_008948055.1| - 1.8e-10 41.0 0.0 2.7e-10 40.4 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|568164515|ref|YP_008948055.1| - 2.7e-07 30.4 0.0 5.2e-07 29.6 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein AstA PF04958.12 gi|568164515|ref|YP_008948055.1| - 0.00051 18.7 0.0 0.0014 17.2 0.0 1.6 2 0 0 2 2 2 1 Arginine N-succinyltransferase beta subunit Acetyltransf_15 PF17013.5 gi|568164515|ref|YP_008948055.1| - 0.011 15.2 0.4 0.07 12.6 0.4 2.0 1 1 0 1 1 1 0 Putative acetyl-transferase Acetyltransf_16 PF05301.11 gi|568164515|ref|YP_008948055.1| - 0.012 15.4 0.1 0.028 14.2 0.0 1.7 2 1 0 2 2 2 0 GNAT acetyltransferase, Mec-17 Acetyltransf_3 PF13302.7 gi|568164515|ref|YP_008948055.1| - 0.013 16.1 0.0 0.016 15.9 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain PanZ PF12568.8 gi|568164515|ref|YP_008948055.1| - 0.02 14.7 0.0 0.023 14.4 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ Acetyltransf_CG PF14542.6 gi|568164515|ref|YP_008948055.1| - 0.037 14.1 0.0 0.06 13.5 0.0 1.4 1 0 0 1 1 1 0 GCN5-related N-acetyl-transferase RecG_N PF17190.4 gi|568164515|ref|YP_008948055.1| - 0.065 14.0 0.3 1.4 9.7 0.1 2.2 2 0 0 2 2 2 0 RecG N-terminal helical domain CRM1_repeat_2 PF18784.1 gi|568164515|ref|YP_008948055.1| - 0.074 12.7 0.1 0.14 11.8 0.1 1.5 1 0 0 1 1 1 0 CRM1 / Exportin repeat 2 malic PF00390.19 gi|568164516|ref|YP_008948056.1| - 2.3e-27 96.0 0.2 1.2e-24 87.1 0.2 2.5 1 1 0 1 1 1 1 Malic enzyme, N-terminal domain Malic_M PF03949.15 gi|568164516|ref|YP_008948056.1| - 3.8e-23 82.1 0.4 1.9e-22 79.8 0.4 1.9 1 1 0 1 1 1 1 Malic enzyme, NAD binding domain AdoHcyase_NAD PF00670.21 gi|568164516|ref|YP_008948056.1| - 0.0022 18.1 0.0 0.0046 17.1 0.0 1.5 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Shikimate_DH PF01488.20 gi|568164516|ref|YP_008948056.1| - 0.0081 16.2 0.1 0.13 12.3 0.0 2.2 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase DUF4031 PF13223.6 gi|568164516|ref|YP_008948056.1| - 0.01 16.1 0.0 0.021 15.0 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4031) AlaDh_PNT_C PF01262.21 gi|568164516|ref|YP_008948056.1| - 0.021 14.1 0.0 0.043 13.1 0.0 1.5 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Oxidored_nitro PF00148.19 gi|568164516|ref|YP_008948056.1| - 0.05 12.3 0.0 0.083 11.6 0.0 1.3 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase Peptidase_S9 PF00326.21 gi|568164517|ref|YP_008948057.1| - 7.4e-39 133.4 0.0 1.5e-38 132.4 0.0 1.4 1 0 0 1 1 1 1 Prolyl oligopeptidase family DLH PF01738.18 gi|568164517|ref|YP_008948057.1| - 8.8e-09 35.2 0.1 9e-08 31.9 0.1 2.3 1 1 0 1 1 1 1 Dienelactone hydrolase family Peptidase_S15 PF02129.18 gi|568164517|ref|YP_008948057.1| - 2.1e-08 34.1 0.1 0.00048 19.8 0.5 2.9 2 1 1 3 3 3 2 X-Pro dipeptidyl-peptidase (S15 family) Abhydrolase_1 PF00561.20 gi|568164517|ref|YP_008948057.1| - 2.6e-08 33.8 1.0 4.3e-06 26.6 0.4 2.5 1 1 1 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|568164517|ref|YP_008948057.1| - 4.8e-06 27.3 1.9 0.0002 22.0 0.6 2.2 1 1 0 2 2 2 1 Alpha/beta hydrolase family Hydrolase_4 PF12146.8 gi|568164517|ref|YP_008948057.1| - 7.1e-06 25.5 0.3 0.00013 21.3 0.1 2.2 1 1 0 2 2 2 1 Serine aminopeptidase, S33 LIP PF03583.14 gi|568164517|ref|YP_008948057.1| - 0.00012 21.5 0.3 0.0012 18.3 0.1 2.1 1 1 1 2 2 2 1 Secretory lipase BAAT_C PF08840.11 gi|568164517|ref|YP_008948057.1| - 0.02 14.8 0.0 0.95 9.3 0.0 2.3 2 0 0 2 2 2 0 BAAT / Acyl-CoA thioester hydrolase C terminal Abhydrolase_3 PF07859.13 gi|568164517|ref|YP_008948057.1| - 0.065 13.1 0.2 1.1 9.1 0.0 2.7 2 1 0 2 2 2 0 alpha/beta hydrolase fold DUF5050 PF16472.5 gi|568164517|ref|YP_008948057.1| - 0.14 11.4 6.3 0.16 11.2 0.2 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF5050) ResB PF05140.14 gi|568164517|ref|YP_008948057.1| - 0.17 10.6 0.0 0.24 10.1 0.0 1.2 1 0 0 1 1 1 0 ResB-like family DNA_pol_B PF00136.21 gi|568164519|ref|YP_008948059.1| - 1.8e-13 50.0 1.7 4.1e-12 45.5 0.1 2.9 1 1 1 2 2 2 2 DNA polymerase family B OrfB_IS605 PF01385.19 gi|568164522|ref|YP_008948062.1| - 1.6e-28 99.3 0.0 1.6e-28 99.3 0.0 2.7 3 0 0 3 3 3 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|568164522|ref|YP_008948062.1| - 9.7e-13 47.8 0.0 1.7e-12 47.1 0.0 1.4 1 0 0 1 1 1 1 Putative transposase DNA-binding domain HTH_OrfB_IS605 PF12323.8 gi|568164522|ref|YP_008948062.1| - 0.008 15.6 0.2 0.027 13.9 0.2 1.9 1 0 0 1 1 1 1 Helix-turn-helix domain FAM153 PF15722.5 gi|568164522|ref|YP_008948062.1| - 0.12 12.8 0.1 0.28 11.5 0.1 1.6 1 0 0 1 1 1 0 FAM153 family TBCA PF02970.16 gi|568164522|ref|YP_008948062.1| - 0.16 12.3 0.2 0.16 12.3 0.2 2.1 2 0 0 2 2 2 0 Tubulin binding cofactor A DUF2079 PF09852.9 gi|568164978|ref|YP_008948064.1| - 0.0065 15.4 0.4 0.0078 15.1 0.4 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2079) TRAM_LAG1_CLN8 PF03798.16 gi|568164978|ref|YP_008948064.1| - 0.014 15.2 3.3 0.016 14.9 3.3 1.2 1 0 0 1 1 1 0 TLC domain TctB PF07331.11 gi|568164978|ref|YP_008948064.1| - 0.04 14.2 2.0 0.049 13.9 2.0 1.1 1 0 0 1 1 1 0 Tripartite tricarboxylate transporter TctB family zinc_ribbon_2 PF13240.6 gi|568164979|ref|YP_008948065.1| - 4.7e-06 26.1 5.1 7.7e-06 25.5 5.1 1.4 1 0 0 1 1 1 1 zinc-ribbon domain zf-RanBP PF00641.18 gi|568164979|ref|YP_008948065.1| - 0.00041 19.6 1.6 0.00088 18.5 1.6 1.5 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others DZR PF12773.7 gi|568164979|ref|YP_008948065.1| - 0.00069 19.6 2.1 0.0012 18.9 2.1 1.3 1 0 0 1 1 1 1 Double zinc ribbon Gemini_mov PF01708.16 gi|568164979|ref|YP_008948065.1| - 0.0046 16.7 0.2 0.0084 15.8 0.2 1.5 1 0 0 1 1 1 1 Geminivirus putative movement protein DUF3094 PF11293.8 gi|568164979|ref|YP_008948065.1| - 0.031 14.0 0.2 0.053 13.3 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3094) zf-ribbon_3 PF13248.6 gi|568164979|ref|YP_008948065.1| - 0.091 12.2 3.9 0.14 11.6 3.9 1.3 1 0 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_15 PF17032.5 gi|568164979|ref|YP_008948065.1| - 0.56 11.0 4.2 1.1 10.0 4.2 1.5 1 0 0 1 1 1 0 zinc-ribbon family YhfH PF14149.6 gi|568164979|ref|YP_008948065.1| - 1.7 8.7 4.7 15 5.7 0.0 2.6 1 1 1 2 2 2 0 YhfH-like protein UPF0547 PF10571.9 gi|568164979|ref|YP_008948065.1| - 7 6.8 6.4 23 5.2 1.1 2.2 1 1 1 2 2 2 0 Uncharacterised protein family UPF0547 zn-ribbon_14 PF16503.5 gi|568164979|ref|YP_008948065.1| - 9.3 5.9 7.3 21 4.7 7.0 1.7 1 1 1 2 2 2 0 Zinc-ribbon RibD_C PF01872.17 gi|568164523|ref|YP_008948066.1| - 3.5e-51 173.9 0.0 4e-51 173.7 0.0 1.0 1 0 0 1 1 1 1 RibD C-terminal domain GDPD PF03009.17 gi|568164524|ref|YP_008948067.1| - 8.4e-29 101.1 0.9 1.3e-28 100.4 0.9 1.3 1 0 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family GDPD_2 PF13653.6 gi|568164524|ref|YP_008948067.1| - 0.015 15.8 1.0 0.037 14.5 0.3 2.0 2 0 0 2 2 2 0 Glycerophosphoryl diester phosphodiesterase family DUF488 PF04343.13 gi|568164525|ref|YP_008948068.1| - 6.2e-19 68.8 0.0 1e-18 68.1 0.0 1.3 1 1 0 1 1 1 1 Protein of unknown function, DUF488 HTH_10 PF04967.12 gi|568164526|ref|YP_008948069.1| - 3.2e-20 71.7 0.2 6.9e-20 70.6 0.2 1.6 1 0 0 1 1 1 1 HTH DNA binding domain Sigma70_r4 PF04545.16 gi|568164526|ref|YP_008948069.1| - 7.7e-06 25.3 1.4 1.7e-05 24.3 1.4 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_24 PF13412.6 gi|568164526|ref|YP_008948069.1| - 0.00077 19.0 0.2 0.00077 19.0 0.2 2.2 2 2 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_26 PF13443.6 gi|568164526|ref|YP_008948069.1| - 0.019 15.4 0.1 0.063 13.7 0.1 1.8 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain HTH_23 PF13384.6 gi|568164526|ref|YP_008948069.1| - 0.048 13.5 0.7 0.18 11.6 0.1 2.1 2 0 0 2 2 2 0 Homeodomain-like domain MarR_2 PF12802.7 gi|568164526|ref|YP_008948069.1| - 0.055 13.4 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_Tnp_ISL3 PF13542.6 gi|568164526|ref|YP_008948069.1| - 0.074 12.5 0.2 0.81 9.1 0.0 2.4 2 1 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 GlnE PF03710.15 gi|568164526|ref|YP_008948069.1| - 0.097 12.1 0.3 0.18 11.2 0.1 1.5 1 1 1 2 2 2 0 Glutamate-ammonia ligase adenylyltransferase HTH_AsnC-type PF13404.6 gi|568164526|ref|YP_008948069.1| - 0.12 12.2 1.4 0.22 11.4 0.1 2.1 2 1 0 2 2 2 0 AsnC-type helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|568164526|ref|YP_008948069.1| - 0.26 11.0 2.6 3.7 7.3 0.1 3.0 3 0 0 3 3 3 0 Sigma-70, region 4 LexA_DNA_bind PF01726.16 gi|568164526|ref|YP_008948069.1| - 0.28 11.0 1.6 3.1 7.6 1.6 2.4 1 1 0 1 1 1 0 LexA DNA binding domain GerE PF00196.19 gi|568164526|ref|YP_008948069.1| - 0.32 10.6 2.3 22 4.7 0.0 3.3 4 0 0 4 4 4 0 Bacterial regulatory proteins, luxR family Amidase PF01425.21 gi|568164527|ref|YP_008948070.1| - 1.6e-112 376.8 0.0 1.8e-112 376.6 0.0 1.0 1 0 0 1 1 1 1 Amidase TRAPPC9-Trs120 PF08626.11 gi|568164528|ref|YP_008948071.1| - 0.011 13.1 0.0 0.014 12.8 0.0 1.0 1 0 0 1 1 1 0 Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit LTD PF00932.19 gi|568164528|ref|YP_008948071.1| - 0.013 15.9 0.4 0.018 15.4 0.4 1.3 1 0 0 1 1 1 0 Lamin Tail Domain DUF973 PF06157.11 gi|568164528|ref|YP_008948071.1| - 0.02 14.0 16.1 0.25 10.3 16.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF973) PCNA_C PF02747.15 gi|568164528|ref|YP_008948071.1| - 0.023 14.9 0.2 0.034 14.3 0.2 1.2 1 0 0 1 1 1 0 Proliferating cell nuclear antigen, C-terminal domain DUF11 PF01345.18 gi|568164528|ref|YP_008948071.1| - 0.028 14.7 1.2 0.043 14.1 1.2 1.4 1 0 0 1 1 1 0 Domain of unknown function DUF11 DUF4330 PF14221.6 gi|568164528|ref|YP_008948071.1| - 0.34 11.1 3.7 0.98 9.6 3.6 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4330) MacB_PCD PF12704.7 gi|568164528|ref|YP_008948071.1| - 0.49 10.7 5.2 0.64 10.3 5.2 1.3 1 1 0 1 1 1 0 MacB-like periplasmic core domain Thermopsin PF05317.11 gi|568164529|ref|YP_008948072.1| - 6e-61 206.2 19.1 6e-61 206.2 19.1 2.5 2 1 0 2 2 2 1 Thermopsin DUF4265 PF14085.6 gi|568164530|ref|YP_008948073.1| - 0.0048 16.9 0.0 0.16 12.0 0.0 2.8 2 1 1 3 3 3 1 Domain of unknown function (DUF4265) Pab87_oct PF13969.6 gi|568164530|ref|YP_008948073.1| - 0.13 12.3 0.1 0.85 9.7 0.0 2.1 2 0 0 2 2 2 0 Pab87 octamerisation domain DUF973 PF06157.11 gi|568164980|ref|YP_008948074.1| - 3e-21 75.8 23.1 6.6e-21 74.7 23.1 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF973) Lactamase_B PF00753.27 gi|568164532|ref|YP_008948077.1| - 7e-13 49.0 0.0 1.1e-12 48.4 0.0 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily DUF4861 PF16153.5 gi|568164532|ref|YP_008948077.1| - 0.11 11.4 0.0 0.17 10.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4861) Sugar_tr PF00083.24 gi|568164533|ref|YP_008948078.1| - 4.5e-68 230.2 29.9 5.4e-68 229.9 29.9 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|568164533|ref|YP_008948078.1| - 7.1e-35 120.6 42.7 7.1e-35 120.6 42.7 1.7 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF3124 PF11322.8 gi|568164534|ref|YP_008948079.1| - 0.2 11.9 1.6 0.5 10.6 0.6 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF3124) AA_permease PF00324.21 gi|568164535|ref|YP_008948080.1| - 7.6e-28 97.3 54.2 1e-27 96.9 54.2 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 gi|568164535|ref|YP_008948080.1| - 7.2e-26 91.0 50.2 7.2e-26 91.0 50.2 1.7 1 1 1 2 2 2 1 Amino acid permease DUF5353 PF17304.2 gi|568164535|ref|YP_008948080.1| - 0.031 14.0 0.8 0.14 11.9 0.8 2.2 1 0 0 1 1 1 0 Family of unknown function (DUF5353) SLATT_5 PF18160.1 gi|568164535|ref|YP_008948080.1| - 0.9 8.8 9.6 0.094 12.0 2.4 2.6 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain family 5 Cu_amine_oxid PF01179.20 gi|568164536|ref|YP_008948081.1| - 2.5e-148 494.4 0.0 3.4e-148 493.9 0.0 1.2 1 0 0 1 1 1 1 Copper amine oxidase, enzyme domain Cu_amine_oxidN3 PF02728.16 gi|568164536|ref|YP_008948081.1| - 2.3e-15 56.8 0.0 4.5e-15 55.9 0.0 1.5 1 0 0 1 1 1 1 Copper amine oxidase, N3 domain Cu_amine_oxidN2 PF02727.16 gi|568164536|ref|YP_008948081.1| - 7.3e-07 29.3 0.1 1.3e-06 28.5 0.1 1.4 1 0 0 1 1 1 1 Copper amine oxidase, N2 domain HTH_10 PF04967.12 gi|568164537|ref|YP_008948082.1| - 4.3e-22 77.7 0.4 9.3e-22 76.6 0.4 1.6 1 0 0 1 1 1 1 HTH DNA binding domain Sigma70_r4 PF04545.16 gi|568164537|ref|YP_008948082.1| - 2.4e-06 27.0 0.4 5.6e-06 25.8 0.4 1.6 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_24 PF13412.6 gi|568164537|ref|YP_008948082.1| - 3.2e-05 23.4 0.3 3.2e-05 23.4 0.3 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|568164537|ref|YP_008948082.1| - 0.012 15.6 0.0 0.032 14.2 0.0 1.8 1 1 0 1 1 1 0 MarR family UPF0122 PF04297.14 gi|568164537|ref|YP_008948082.1| - 0.023 14.9 1.7 0.18 12.0 0.2 2.5 2 0 0 2 2 2 0 Putative helix-turn-helix protein, YlxM / p13 like HTH_Tnp_1_2 PF13022.6 gi|568164537|ref|YP_008948082.1| - 0.034 14.3 0.4 0.092 12.9 0.0 1.9 2 1 1 3 3 3 0 Helix-turn-helix of insertion element transposase LexA_DNA_bind PF01726.16 gi|568164537|ref|YP_008948082.1| - 0.039 13.7 0.9 0.23 11.3 0.9 2.3 1 1 0 1 1 1 0 LexA DNA binding domain HTH_Crp_2 PF13545.6 gi|568164537|ref|YP_008948082.1| - 0.04 13.9 0.5 0.13 12.2 0.0 2.0 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_23 PF13384.6 gi|568164537|ref|YP_008948082.1| - 0.048 13.5 0.2 0.24 11.2 0.1 2.2 2 0 0 2 2 2 0 Homeodomain-like domain HTH_Mga PF08280.11 gi|568164537|ref|YP_008948082.1| - 0.067 13.2 1.9 0.31 11.1 0.1 2.9 3 1 0 3 3 3 0 M protein trans-acting positive regulator (MGA) HTH domain LRR_2 PF07723.13 gi|568164537|ref|YP_008948082.1| - 0.072 13.8 0.0 0.24 12.1 0.0 1.9 1 0 0 1 1 1 0 Leucine Rich Repeat HTH_AsnC-type PF13404.6 gi|568164537|ref|YP_008948082.1| - 0.089 12.6 1.1 0.21 11.4 0.0 2.1 2 0 0 2 2 2 0 AsnC-type helix-turn-helix domain FeoC PF09012.10 gi|568164537|ref|YP_008948082.1| - 0.097 12.8 0.1 0.61 10.2 0.0 2.2 2 0 0 2 2 2 0 FeoC like transcriptional regulator GerE PF00196.19 gi|568164537|ref|YP_008948082.1| - 0.1 12.1 3.1 0.61 9.7 0.8 2.9 2 1 0 2 2 2 0 Bacterial regulatory proteins, luxR family PCI PF01399.27 gi|568164537|ref|YP_008948082.1| - 0.12 12.9 1.4 0.16 12.5 0.2 1.9 2 2 0 2 2 2 0 PCI domain HTH_35 PF13693.6 gi|568164537|ref|YP_008948082.1| - 0.12 12.4 0.6 0.29 11.2 0.1 1.9 2 0 0 2 2 1 0 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|568164537|ref|YP_008948082.1| - 0.12 12.2 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 MarR family HTH_Tnp_ISL3 PF13542.6 gi|568164537|ref|YP_008948082.1| - 0.15 11.5 0.1 0.95 8.9 0.0 2.3 2 1 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 DUF488 PF04343.13 gi|568164538|ref|YP_008948083.1| - 7.9e-26 91.0 0.1 9.8e-26 90.7 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function, DUF488 Aldose_epim PF01263.20 gi|568164539|ref|YP_008948084.1| - 3.3e-38 131.7 0.0 8.1e-38 130.4 0.0 1.5 1 1 0 1 1 1 1 Aldose 1-epimerase RimM PF01782.18 gi|568164539|ref|YP_008948084.1| - 0.16 12.2 0.0 0.47 10.7 0.0 1.8 1 0 0 1 1 1 0 RimM N-terminal domain ABC2_membrane PF01061.24 gi|568164540|ref|YP_008948085.1| - 1.5e-29 102.9 21.8 1.5e-29 102.9 21.8 1.8 1 1 1 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|568164540|ref|YP_008948085.1| - 1.9e-13 50.2 27.7 3.2e-13 49.5 27.7 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|568164540|ref|YP_008948085.1| - 5.4e-06 25.9 17.8 5.4e-06 25.9 17.8 1.6 1 1 1 2 2 2 1 ABC-2 family transporter protein Phage_holin_1 PF04531.13 gi|568164540|ref|YP_008948085.1| - 0.013 16.0 3.4 0.45 11.1 0.1 2.8 2 1 1 3 3 3 0 Bacteriophage holin Amidohydro_2 PF04909.14 gi|568164541|ref|YP_008948086.1| - 6.4e-14 52.4 0.0 1.1e-13 51.7 0.0 1.4 1 0 0 1 1 1 1 Amidohydrolase MFS_1 PF07690.16 gi|568164542|ref|YP_008948087.1| - 1.6e-31 109.5 53.8 1.1e-28 100.2 26.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF1129 PF06570.11 gi|568164542|ref|YP_008948087.1| - 0.00094 18.7 1.4 0.00094 18.7 1.4 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF1129) BPD_transp_2 PF02653.16 gi|568164982|ref|YP_008948088.1| - 3.4e-06 26.4 3.4 3.9e-06 26.2 3.4 1.0 1 0 0 1 1 1 1 Branched-chain amino acid transport system / permease component Ribonuc_red_sm PF00268.21 gi|568164543|ref|YP_008948089.1| - 7.3e-21 74.9 0.1 1.2e-20 74.1 0.1 1.3 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain Rubrerythrin PF02915.17 gi|568164543|ref|YP_008948089.1| - 0.00067 20.1 0.1 0.16 12.3 0.2 2.6 2 1 0 2 2 2 2 Rubrerythrin DUF455 PF04305.14 gi|568164543|ref|YP_008948089.1| - 0.017 14.7 0.0 0.74 9.3 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF455) Malate_synthase PF01274.22 gi|568164544|ref|YP_008948091.1| - 1.5e-43 148.9 0.0 5e-39 134.0 0.0 2.2 2 0 0 2 2 2 2 Malate synthase DUF5343 PF17278.2 gi|568164544|ref|YP_008948091.1| - 0.096 12.8 0.1 12 6.0 0.0 2.5 2 0 0 2 2 2 0 Family of unknown function (DUF5343) DUF4413 PF14372.6 gi|568164544|ref|YP_008948091.1| - 0.16 12.4 1.1 1.9 8.9 0.1 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4413) ICL PF00463.21 gi|568164545|ref|YP_008948092.1| - 1.6e-115 386.6 0.3 2.6e-62 211.0 0.0 2.1 1 1 1 2 2 2 2 Isocitrate lyase family PEP_mutase PF13714.6 gi|568164545|ref|YP_008948092.1| - 4.7e-15 55.7 0.0 8.3e-15 54.9 0.0 1.3 1 0 0 1 1 1 1 Phosphoenolpyruvate phosphomutase PIN PF01850.21 gi|568164546|ref|YP_008948093.1| - 7.8e-05 23.2 0.0 0.00015 22.3 0.0 1.4 1 1 0 1 1 1 1 PIN domain MazE_antitoxin PF04014.18 gi|568164547|ref|YP_008948094.1| - 2.3e-13 49.7 0.3 3.3e-13 49.2 0.3 1.3 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin DUF3006 PF11213.8 gi|568164547|ref|YP_008948094.1| - 0.03 14.5 0.1 0.046 14.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3006) PaREP1 PF05942.11 gi|568164548|ref|YP_008948097.1| - 3.7e-27 94.6 1.2 4.4e-27 94.3 1.2 1.0 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family HEPN PF05168.14 gi|568164548|ref|YP_008948097.1| - 0.043 14.0 0.4 0.05 13.7 0.4 1.1 1 0 0 1 1 1 0 HEPN domain LUC7 PF03194.15 gi|568164548|ref|YP_008948097.1| - 0.18 11.5 0.0 0.18 11.5 0.0 1.1 1 0 0 1 1 1 0 LUC7 N_terminus PaREP1 PF05942.11 gi|568164549|ref|YP_008948098.1| - 1.8e-25 89.1 0.8 2.1e-25 88.9 0.8 1.1 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family MR_MLE_C PF13378.6 gi|568164550|ref|YP_008948099.1| - 3.2e-55 187.1 0.0 4.1e-55 186.7 0.0 1.1 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 gi|568164550|ref|YP_008948099.1| - 9.2e-10 38.8 0.0 1.5e-09 38.0 0.0 1.3 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain His_biosynth PF00977.21 gi|568164550|ref|YP_008948099.1| - 0.057 12.9 0.0 0.098 12.1 0.0 1.4 1 0 0 1 1 1 0 Histidine biosynthesis protein Lig_C PF18330.1 gi|568164551|ref|YP_008948100.1| - 0.052 13.6 0.0 0.064 13.3 0.0 1.1 1 0 0 1 1 1 0 Ligase Pab1020 C-terminal region Rhodanese PF00581.20 gi|568164552|ref|YP_008948101.1| - 2.5e-40 137.3 0.2 1.7e-20 73.5 0.0 2.2 2 0 0 2 2 2 2 Rhodanese-like domain Aminotran_4 PF01063.19 gi|568164553|ref|YP_008948102.1| - 0.092 12.6 0.0 0.15 11.9 0.0 1.4 1 1 1 2 2 2 0 Amino-transferase class IV TP_methylase PF00590.20 gi|568164554|ref|YP_008948103.1| - 1.2e-42 146.3 0.0 1.4e-42 146.1 0.0 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases NIR_SIR PF01077.22 gi|568164555|ref|YP_008948104.1| - 5.8e-36 123.4 0.0 3.8e-34 117.5 0.0 2.9 2 1 0 2 2 2 2 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.17 gi|568164555|ref|YP_008948104.1| - 1.7e-24 85.5 0.5 3.5e-11 42.8 0.0 3.7 4 1 0 4 4 4 2 Nitrite/Sulfite reductase ferredoxin-like half domain PAPS_reduct PF01507.19 gi|568164556|ref|YP_008948105.1| - 6.6e-45 153.3 0.1 7.9e-45 153.0 0.1 1.1 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family RsfS PF02410.15 gi|568164556|ref|YP_008948105.1| - 0.015 15.7 0.0 0.028 14.9 0.0 1.4 1 1 0 1 1 1 0 Ribosomal silencing factor during starvation ATP-sulfurylase PF01747.17 gi|568164557|ref|YP_008948106.1| - 9.6e-79 263.8 0.0 1.3e-78 263.4 0.0 1.2 1 0 0 1 1 1 1 ATP-sulfurylase PUA_2 PF14306.6 gi|568164557|ref|YP_008948106.1| - 4.7e-42 143.4 0.1 7.7e-42 142.7 0.1 1.3 1 0 0 1 1 1 1 PUA-like domain TF_Zn_Ribbon PF08271.12 gi|568164557|ref|YP_008948106.1| - 0.00037 19.9 1.0 0.00083 18.8 0.3 1.9 2 0 0 2 2 2 1 TFIIB zinc-binding DUF309 PF03745.14 gi|568164557|ref|YP_008948106.1| - 0.034 13.8 0.6 1.1 9.0 0.0 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF309) zf-ribbon_3 PF13248.6 gi|568164557|ref|YP_008948106.1| - 0.17 11.3 0.7 0.27 10.7 0.7 1.3 1 0 0 1 1 1 0 zinc-ribbon domain LIDHydrolase PF10230.9 gi|568164558|ref|YP_008948107.1| - 0.16 11.5 0.0 0.16 11.5 0.0 1.0 1 0 0 1 1 1 0 Lipid-droplet associated hydrolase ADH_N PF08240.12 gi|568164559|ref|YP_008948108.1| - 4.4e-24 84.5 1.0 7.6e-23 80.5 1.0 2.2 1 1 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|568164559|ref|YP_008948108.1| - 4.2e-16 59.1 0.0 5.8e-15 55.4 0.0 2.4 1 1 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|568164559|ref|YP_008948108.1| - 1.8e-11 45.3 0.1 3.8e-11 44.2 0.0 1.6 2 0 0 2 2 2 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 gi|568164559|ref|YP_008948108.1| - 2.1e-05 24.1 0.2 3.8e-05 23.3 0.2 1.3 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus Epimerase PF01370.21 gi|568164559|ref|YP_008948108.1| - 0.00057 19.4 0.1 0.00093 18.7 0.1 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Citrate_bind PF16114.5 gi|568164559|ref|YP_008948108.1| - 0.054 13.0 0.1 0.1 12.1 0.1 1.4 1 0 0 1 1 1 0 ATP citrate lyase citrate-binding NADH_4Fe-4S PF10589.9 gi|568164559|ref|YP_008948108.1| - 0.061 13.4 0.0 0.13 12.4 0.0 1.5 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Polysacc_synt_2 PF02719.15 gi|568164559|ref|YP_008948108.1| - 0.063 12.4 0.1 0.093 11.8 0.1 1.3 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein ThiF PF00899.21 gi|568164559|ref|YP_008948108.1| - 0.1 11.9 0.2 0.17 11.2 0.2 1.3 1 0 0 1 1 1 0 ThiF family RmlD_sub_bind PF04321.17 gi|568164559|ref|YP_008948108.1| - 0.14 11.2 0.2 0.66 9.0 0.2 1.9 1 1 0 1 1 1 0 RmlD substrate binding domain Lip_prot_lig_C PF10437.9 gi|568164560|ref|YP_008948109.1| - 0.00019 21.4 0.9 0.00041 20.3 0.2 2.0 2 1 0 2 2 2 1 Bacterial lipoate protein ligase C-terminus AMP-binding PF00501.28 gi|568164561|ref|YP_008948110.1| - 9.3e-68 228.7 0.0 1.1e-67 228.5 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|568164561|ref|YP_008948110.1| - 1.6e-07 32.2 0.1 2.7e-07 31.5 0.1 1.4 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain 3HCDH_N PF02737.18 gi|568164562|ref|YP_008948111.1| - 2.7e-66 222.9 1.2 5e-66 222.0 1.2 1.5 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ECH_1 PF00378.20 gi|568164562|ref|YP_008948111.1| - 1.8e-51 174.9 0.0 2.9e-51 174.2 0.0 1.3 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase 3HCDH PF00725.22 gi|568164562|ref|YP_008948111.1| - 8.6e-44 148.1 0.1 5.8e-23 81.3 0.1 2.5 2 0 0 2 2 2 2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ECH_2 PF16113.5 gi|568164562|ref|YP_008948111.1| - 1.9e-35 122.9 0.5 1.1e-34 120.5 0.0 2.2 2 1 1 3 3 3 1 Enoyl-CoA hydratase/isomerase NAD_binding_2 PF03446.15 gi|568164562|ref|YP_008948111.1| - 0.00034 20.8 0.0 0.00079 19.6 0.0 1.7 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Pyr_redox_2 PF07992.14 gi|568164562|ref|YP_008948111.1| - 0.0024 17.2 0.1 0.004 16.4 0.1 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_Gly3P_dh_N PF01210.23 gi|568164562|ref|YP_008948111.1| - 0.021 14.8 0.0 0.057 13.4 0.0 1.8 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus F420_oxidored PF03807.17 gi|568164562|ref|YP_008948111.1| - 0.022 15.3 0.0 0.069 13.7 0.0 1.9 1 0 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent Methyltransf_11 PF08241.12 gi|568164562|ref|YP_008948111.1| - 0.028 15.1 0.1 0.095 13.4 0.1 1.9 1 0 0 1 1 1 0 Methyltransferase domain 2-Hacid_dh_C PF02826.19 gi|568164562|ref|YP_008948111.1| - 0.029 13.7 0.1 0.054 12.8 0.1 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.14 gi|568164562|ref|YP_008948111.1| - 0.032 13.8 0.0 0.079 12.5 0.0 1.7 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain adh_short_C2 PF13561.6 gi|568164562|ref|YP_008948111.1| - 0.089 12.3 0.0 0.21 11.1 0.0 1.7 1 0 0 1 1 1 0 Enoyl-(Acyl carrier protein) reductase Dimerisation PF08100.11 gi|568164562|ref|YP_008948111.1| - 0.48 10.5 1.8 0.72 9.9 0.2 2.1 2 0 0 2 2 2 0 Dimerisation domain Thiolase_N PF00108.23 gi|568164563|ref|YP_008948112.1| - 1.4e-25 90.2 0.0 2.5e-25 89.3 0.0 1.4 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|568164563|ref|YP_008948112.1| - 1.2e-08 34.6 0.2 3.7e-06 26.6 0.1 2.8 2 0 0 2 2 2 2 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|568164563|ref|YP_008948112.1| - 4.3e-08 33.1 6.0 4.9e-07 29.6 0.8 2.8 2 1 1 3 3 3 2 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III PF08545.10 gi|568164563|ref|YP_008948112.1| - 4e-07 29.8 0.1 2e-05 24.3 0.1 2.4 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FAE1_CUT1_RppA PF08392.12 gi|568164563|ref|YP_008948112.1| - 0.0015 17.9 0.0 0.0028 17.0 0.0 1.4 1 0 0 1 1 1 1 FAE1/Type III polyketide synthase-like protein SpoVAD PF07451.11 gi|568164563|ref|YP_008948112.1| - 0.073 11.8 0.3 0.21 10.3 0.2 1.7 2 1 0 2 2 2 0 Stage V sporulation protein AD (SpoVAD) OB_aCoA_assoc PF01796.17 gi|568164564|ref|YP_008948113.1| - 6.2e-13 48.5 0.0 9.5e-13 47.9 0.0 1.3 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated DUF35_N PF12172.8 gi|568164564|ref|YP_008948113.1| - 1.8e-11 43.7 0.2 2.7e-11 43.1 0.2 1.3 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) Auto_anti-p27 PF06677.12 gi|568164564|ref|YP_008948113.1| - 0.034 14.3 2.2 0.035 14.2 0.8 1.7 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) SRAP PF02586.14 gi|568164564|ref|YP_008948113.1| - 0.13 11.8 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 SOS response associated peptidase (SRAP) Qn_am_d_aIII PF09099.10 gi|568164564|ref|YP_008948113.1| - 0.19 12.1 0.0 0.35 11.3 0.0 1.3 1 0 0 1 1 1 0 Quinohemoprotein amine dehydrogenase, alpha subunit domain III zf-C2H2_3 PF13878.6 gi|568164564|ref|YP_008948113.1| - 0.4 10.5 1.6 0.42 10.5 0.1 1.8 1 1 1 2 2 2 0 zinc-finger of acetyl-transferase ESCO AMP-binding PF00501.28 gi|568164565|ref|YP_008948114.1| - 7.9e-86 288.3 0.0 9.9e-86 288.0 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|568164565|ref|YP_008948114.1| - 1.8e-21 76.9 0.0 4.1e-21 75.7 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Ribonuc_red_sm PF00268.21 gi|568164566|ref|YP_008948115.1| - 2.2e-16 60.1 0.0 3.6e-16 59.5 0.0 1.2 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain DUF455 PF04305.14 gi|568164566|ref|YP_008948115.1| - 0.0037 16.8 0.0 3 7.3 0.0 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF455) AurF PF11583.8 gi|568164566|ref|YP_008948115.1| - 0.038 13.3 0.0 2.8 7.1 0.0 2.4 2 0 0 2 2 2 0 P-aminobenzoate N-oxygenase AurF Cu_amine_oxid PF01179.20 gi|568164566|ref|YP_008948115.1| - 0.06 12.2 0.0 0.099 11.5 0.0 1.3 1 0 0 1 1 1 0 Copper amine oxidase, enzyme domain Rubrerythrin PF02915.17 gi|568164566|ref|YP_008948115.1| - 0.081 13.3 0.8 0.63 10.4 0.1 2.6 3 1 0 3 3 3 0 Rubrerythrin Abhydrolase_1 PF00561.20 gi|568164567|ref|YP_008948116.1| - 3e-26 92.6 0.4 2.8e-16 59.9 0.1 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|568164567|ref|YP_008948116.1| - 2.7e-14 53.0 0.0 4.3e-14 52.4 0.0 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 gi|568164567|ref|YP_008948116.1| - 2e-13 51.5 0.0 2.7e-13 51.0 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.21 gi|568164567|ref|YP_008948116.1| - 0.00092 18.7 0.6 0.28 10.6 0.0 2.5 2 1 0 2 2 2 2 Prolyl oligopeptidase family FSH1 PF03959.13 gi|568164567|ref|YP_008948116.1| - 0.0036 17.0 0.0 0.0077 15.9 0.0 1.6 1 1 0 1 1 1 1 Serine hydrolase (FSH1) Abhydrolase_5 PF12695.7 gi|568164567|ref|YP_008948116.1| - 0.018 14.8 0.0 4.6 7.0 0.0 2.2 2 0 0 2 2 2 0 Alpha/beta hydrolase family PGAP1 PF07819.13 gi|568164567|ref|YP_008948116.1| - 0.081 12.6 0.1 0.28 10.8 0.0 1.9 1 1 1 2 2 2 0 PGAP1-like protein Abhydrolase_4 PF08386.10 gi|568164567|ref|YP_008948116.1| - 0.089 12.9 0.0 0.14 12.3 0.0 1.3 1 0 0 1 1 1 0 TAP-like protein Thioesterase PF00975.20 gi|568164567|ref|YP_008948116.1| - 0.14 12.2 0.0 0.21 11.7 0.0 1.2 1 0 0 1 1 1 0 Thioesterase domain TAT_signal PF10518.9 gi|568164567|ref|YP_008948116.1| - 0.16 11.9 1.3 0.27 11.1 1.3 1.3 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence HPP PF04982.13 gi|568164568|ref|YP_008948119.1| - 8.4e-07 29.2 5.0 8.4e-07 29.2 5.0 1.7 1 1 1 2 2 2 2 HPP family Fun_ATP-synt_8 PF05933.13 gi|568164568|ref|YP_008948119.1| - 0.79 9.9 0.1 0.79 9.9 0.1 3.3 3 1 0 3 3 3 0 Fungal ATP synthase protein 8 (A6L) DUF998 PF06197.13 gi|568164569|ref|YP_008948120.1| - 3.6e-18 65.8 8.3 4.4e-18 65.6 8.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF998) FAM153 PF15722.5 gi|568164988|ref|YP_008948121.1| - 0.079 13.3 0.1 0.11 12.8 0.1 1.1 1 0 0 1 1 1 0 FAM153 family Cas_DxTHG PF09455.10 gi|568164570|ref|YP_008948123.1| - 4.8e-25 88.9 10.3 7.2e-25 88.3 10.3 1.3 1 0 0 1 1 1 1 CRISPR-associated (Cas) DxTHG family Ribonuclease_T2 PF00445.18 gi|568164570|ref|YP_008948123.1| - 0.031 14.5 0.0 1.3 9.3 0.0 3.0 2 1 0 2 2 2 0 Ribonuclease T2 family CTK3 PF12243.8 gi|568164570|ref|YP_008948123.1| - 0.18 11.8 7.1 0.049 13.6 1.3 2.8 3 0 0 3 3 3 0 CTD kinase subunit gamma CTK3 Apolipoprotein PF01442.18 gi|568164990|ref|YP_008948124.1| - 1.6e-11 44.4 8.7 2.6e-11 43.8 8.7 1.3 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain DUF1640 PF07798.11 gi|568164990|ref|YP_008948124.1| - 4.7e-11 43.1 18.8 5.2e-08 33.1 18.0 2.3 1 1 1 2 2 2 2 Protein of unknown function (DUF1640) Gp-FAR-1 PF05823.12 gi|568164990|ref|YP_008948124.1| - 3.9e-06 27.3 12.2 0.0025 18.2 0.9 2.7 1 1 1 2 2 2 2 Nematode fatty acid retinoid binding protein (Gp-FAR-1) YlqD PF11068.8 gi|568164990|ref|YP_008948124.1| - 0.00069 20.0 12.3 0.071 13.5 2.2 2.2 1 1 1 2 2 2 2 YlqD protein ApoLp-III PF07464.11 gi|568164990|ref|YP_008948124.1| - 0.0012 19.0 9.3 0.0024 18.0 9.2 1.7 1 1 0 1 1 1 1 Apolipophorin-III precursor (apoLp-III) Gp58 PF07902.11 gi|568164990|ref|YP_008948124.1| - 0.002 16.5 10.1 0.0022 16.4 1.9 1.9 1 1 1 2 2 2 2 gp58-like protein DUF883 PF05957.13 gi|568164990|ref|YP_008948124.1| - 0.0022 18.5 11.2 0.2 12.3 2.9 3.0 1 1 3 4 4 4 4 Bacterial protein of unknown function (DUF883) FAM184 PF15665.5 gi|568164990|ref|YP_008948124.1| - 0.0029 17.4 17.9 0.13 12.1 9.4 2.4 1 1 1 2 2 2 2 Family with sequence similarity 184, A and B Baculo_PEP_C PF04513.12 gi|568164990|ref|YP_008948124.1| - 0.0035 17.4 8.4 0.21 11.6 8.4 2.7 1 1 0 1 1 1 1 Baculovirus polyhedron envelope protein, PEP, C terminus OmpH PF03938.14 gi|568164990|ref|YP_008948124.1| - 0.0043 17.4 17.9 0.021 15.2 4.6 2.5 1 1 1 2 2 2 2 Outer membrane protein (OmpH-like) DUF5082 PF16888.5 gi|568164990|ref|YP_008948124.1| - 0.0053 17.0 18.1 0.012 15.8 17.6 1.9 1 1 0 1 1 1 1 Domain of unknown function (DUF5082) eIF3_N PF09440.10 gi|568164990|ref|YP_008948124.1| - 0.017 15.6 6.6 0.017 15.6 6.6 2.0 1 1 1 2 2 2 0 eIF3 subunit 6 N terminal domain Prominin PF05478.11 gi|568164990|ref|YP_008948124.1| - 0.018 13.0 10.4 0.04 11.9 9.8 1.6 1 1 0 1 1 1 0 Prominin Focal_AT PF03623.13 gi|568164990|ref|YP_008948124.1| - 0.022 14.8 10.7 0.45 10.5 2.8 2.6 1 1 2 3 3 3 0 Focal adhesion targeting region AAA_32 PF13654.6 gi|568164990|ref|YP_008948124.1| - 0.024 13.4 12.0 0.028 13.2 12.0 1.1 1 0 0 1 1 1 0 AAA domain Phage_Mu_Gam PF07352.12 gi|568164990|ref|YP_008948124.1| - 0.027 14.4 17.4 0.11 12.4 3.4 3.2 1 1 2 3 3 3 0 Bacteriophage Mu Gam like protein Fib_alpha PF08702.10 gi|568164990|ref|YP_008948124.1| - 0.036 14.2 19.6 0.53 10.5 8.0 2.6 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DnaA_N PF11638.8 gi|568164990|ref|YP_008948124.1| - 0.042 13.6 0.0 0.13 12.1 0.0 1.8 1 0 0 1 1 1 0 DnaA N-terminal domain DLP_helical PF18709.1 gi|568164990|ref|YP_008948124.1| - 0.054 12.7 17.7 0.71 9.0 8.9 2.2 1 1 1 2 2 2 0 Dynamin-like helical domain Bacillus_HBL PF05791.11 gi|568164990|ref|YP_008948124.1| - 0.057 13.2 9.1 0.59 9.9 5.8 2.4 1 1 2 3 3 3 0 Bacillus haemolytic enterotoxin (HBL) Exonuc_VII_L PF02601.15 gi|568164990|ref|YP_008948124.1| - 0.079 12.5 9.0 0.11 12.1 9.0 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF1664 PF07889.12 gi|568164990|ref|YP_008948124.1| - 0.098 12.7 11.2 0.22 11.6 4.3 2.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DCB PF16213.5 gi|568164990|ref|YP_008948124.1| - 0.12 12.1 10.2 1.6 8.4 0.6 3.1 1 1 1 3 3 3 0 Dimerisation and cyclophilin-binding domain of Mon2 DUF4795 PF16043.5 gi|568164990|ref|YP_008948124.1| - 0.13 11.9 28.9 0.7 9.5 14.5 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) DUF3618 PF12277.8 gi|568164990|ref|YP_008948124.1| - 0.13 12.5 5.4 6.1 7.2 0.0 3.8 2 1 1 3 3 3 0 Protein of unknown function (DUF3618) DUF1451 PF07295.11 gi|568164990|ref|YP_008948124.1| - 0.13 12.3 10.3 0.5 10.4 2.3 2.2 1 1 1 2 2 2 0 Zinc-ribbon containing domain ALMT PF11744.8 gi|568164990|ref|YP_008948124.1| - 0.14 11.0 3.4 0.16 10.8 3.4 1.2 1 0 0 1 1 1 0 Aluminium activated malate transporter VirE PF05272.11 gi|568164990|ref|YP_008948124.1| - 0.15 11.7 7.1 0.48 10.1 1.1 2.5 1 1 1 2 2 2 0 Virulence-associated protein E DUF4407 PF14362.6 gi|568164990|ref|YP_008948124.1| - 0.21 10.9 12.7 0.91 8.8 12.7 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) PKK PF12474.8 gi|568164990|ref|YP_008948124.1| - 0.22 11.7 22.8 9.7 6.3 22.2 2.6 1 1 1 2 2 2 0 Polo kinase kinase Microvir_H PF04687.12 gi|568164990|ref|YP_008948124.1| - 0.23 10.8 6.6 0.87 8.9 0.2 2.3 1 1 1 2 2 2 0 Microvirus H protein (pilot protein) Peptidase_M75 PF09375.10 gi|568164990|ref|YP_008948124.1| - 0.25 10.8 2.0 0.69 9.3 0.3 2.0 1 1 1 2 2 1 0 Imelysin MADF_DNA_bdg PF10545.9 gi|568164990|ref|YP_008948124.1| - 0.27 11.6 13.3 4.8e+02 1.2 12.0 4.0 1 1 1 2 2 2 0 Alcohol dehydrogenase transcription factor Myb/SANT-like DUF4175 PF13779.6 gi|568164990|ref|YP_008948124.1| - 0.29 9.0 13.7 0.39 8.6 13.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4175) Vps51 PF08700.11 gi|568164990|ref|YP_008948124.1| - 0.42 10.7 14.5 24 5.1 6.8 4.0 1 1 1 2 2 2 0 Vps51/Vps67 PhaP_Bmeg PF09602.10 gi|568164990|ref|YP_008948124.1| - 0.52 10.2 12.4 0.064 13.2 3.8 2.4 1 1 1 2 2 2 0 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) TMPIT PF07851.13 gi|568164990|ref|YP_008948124.1| - 0.53 9.5 9.9 0.84 8.8 2.7 2.1 1 1 1 2 2 2 0 TMPIT-like protein Uso1_p115_C PF04871.13 gi|568164990|ref|YP_008948124.1| - 0.53 10.7 19.8 1.1e+02 3.2 19.8 2.4 1 1 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region Mitofilin PF09731.9 gi|568164990|ref|YP_008948124.1| - 0.66 8.8 22.3 1.1 8.0 22.3 1.4 1 1 0 1 1 1 0 Mitochondrial inner membrane protein PIN_8 PF18476.1 gi|568164990|ref|YP_008948124.1| - 0.78 9.6 16.1 43 3.9 16.1 2.2 1 1 0 1 1 1 0 PIN like domain HisKA_3 PF07730.13 gi|568164990|ref|YP_008948124.1| - 0.82 10.2 6.7 2.8 8.5 0.2 3.1 2 1 1 3 3 2 0 Histidine kinase RexA PF15969.5 gi|568164990|ref|YP_008948124.1| - 0.91 9.0 12.9 0.051 13.1 6.6 1.9 1 1 0 2 2 2 0 Intracellular sensor of Lambda phage, Abi component TetR_C_24 PF17932.1 gi|568164990|ref|YP_008948124.1| - 1.1 9.5 8.2 2.8 8.2 1.3 3.5 1 1 3 4 4 4 0 Tetracyclin repressor-like, C-terminal domain HSCB_C PF07743.13 gi|568164990|ref|YP_008948124.1| - 1.2 9.6 26.3 1.1 9.8 3.3 3.8 2 1 2 4 4 3 0 HSCB C-terminal oligomerisation domain Med9 PF07544.13 gi|568164990|ref|YP_008948124.1| - 1.5 9.0 18.0 0.56 10.3 1.6 3.3 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 Fzo_mitofusin PF04799.13 gi|568164990|ref|YP_008948124.1| - 1.5 8.3 11.4 6.1 6.4 6.0 2.7 1 1 1 2 2 2 0 fzo-like conserved region Aida_N PF08910.10 gi|568164990|ref|YP_008948124.1| - 1.8 9.0 8.8 9.3 6.7 0.7 3.2 1 1 1 3 3 3 0 Aida N-terminus Metal_resist PF13801.6 gi|568164990|ref|YP_008948124.1| - 1.9 8.7 3.5 1.7 8.8 0.4 2.5 2 1 1 3 3 2 0 Heavy-metal resistance V-ATPase_G PF03179.15 gi|568164990|ref|YP_008948124.1| - 2 9.0 16.6 6.4 7.4 3.7 2.6 1 1 1 2 2 2 0 Vacuolar (H+)-ATPase G subunit Spore_III_AB PF09548.10 gi|568164990|ref|YP_008948124.1| - 2.6 8.2 12.1 9.3 6.3 9.2 2.6 1 1 1 2 2 2 0 Stage III sporulation protein AB (spore_III_AB) DUF2115 PF09888.9 gi|568164990|ref|YP_008948124.1| - 2.7 8.5 10.8 2.1 8.9 7.0 2.3 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2115) DUF885 PF05960.11 gi|568164990|ref|YP_008948124.1| - 2.8 7.5 5.3 6.2 6.3 5.2 1.6 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF885) DUF4168 PF13767.6 gi|568164990|ref|YP_008948124.1| - 2.9 9.1 9.6 3.8e+02 2.3 9.6 3.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4168) GP41 PF00517.17 gi|568164990|ref|YP_008948124.1| - 3.1 7.6 7.1 16 5.4 0.3 2.8 1 1 2 3 3 3 0 Retroviral envelope protein DUF4806 PF16064.5 gi|568164990|ref|YP_008948124.1| - 3.2 8.1 7.6 1.7 9.0 1.0 3.0 1 1 1 3 3 3 0 Domain of unknown function (DUF4806) DUF4549 PF15082.6 gi|568164990|ref|YP_008948124.1| - 3.7 7.3 12.8 3.3 7.5 1.3 3.1 1 1 2 3 3 3 0 Domain of unknown function (DUF4549) APG6_N PF17675.1 gi|568164990|ref|YP_008948124.1| - 3.8 8.0 21.5 4.9e+02 1.2 21.4 2.4 1 1 0 1 1 1 0 Apg6 coiled-coil region FlxA PF14282.6 gi|568164990|ref|YP_008948124.1| - 4.6 7.3 12.0 7.7 6.6 8.3 2.7 2 1 1 3 3 2 0 FlxA-like protein DUF3450 PF11932.8 gi|568164990|ref|YP_008948124.1| - 4.8 6.4 12.4 1.2 8.4 4.2 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) SidE PF12252.8 gi|568164990|ref|YP_008948124.1| - 9.6 3.6 19.8 15 3.0 19.8 1.3 1 1 0 1 1 1 0 Dot/Icm substrate protein TrkA_N PF02254.18 gi|568164571|ref|YP_008948126.1| - 8.2e-18 64.8 0.3 1.3e-17 64.1 0.3 1.3 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.21 gi|568164571|ref|YP_008948126.1| - 3.1e-06 26.9 0.2 2.3e-05 24.1 0.0 2.4 3 0 0 3 3 3 1 TrkA-C domain Ion_trans_2 PF07885.16 gi|568164571|ref|YP_008948126.1| - 0.0031 17.4 8.8 0.0057 16.6 8.8 1.4 1 0 0 1 1 1 1 Ion channel CRISPR_Cas2 PF09827.9 gi|568164572|ref|YP_008948127.1| - 2.2e-21 75.8 0.5 2.6e-21 75.6 0.5 1.1 1 0 0 1 1 1 1 CRISPR associated protein Cas2 PPO1_DWL PF12142.8 gi|568164572|ref|YP_008948127.1| - 0.088 12.6 0.5 0.13 12.0 0.4 1.4 1 1 0 1 1 1 0 Polyphenol oxidase middle domain RLAN PF14401.6 gi|568164572|ref|YP_008948127.1| - 0.092 12.4 0.0 0.13 11.9 0.0 1.5 1 1 0 1 1 1 0 RimK-like ATPgrasp N-terminal domain MmlI PF09448.10 gi|568164572|ref|YP_008948127.1| - 0.14 12.6 0.0 0.17 12.4 0.0 1.1 1 0 0 1 1 1 0 Methylmuconolactone methyl-isomerase Cas_Cas1 PF01867.16 gi|568164573|ref|YP_008948128.1| - 6.5e-62 209.2 0.1 8e-62 208.9 0.1 1.0 1 0 0 1 1 1 1 CRISPR associated protein Cas1 Cas_Cas4 PF01930.17 gi|568164574|ref|YP_008948129.1| - 4e-22 79.1 1.8 4.6e-22 78.8 1.8 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF83 PDDEXK_1 PF12705.7 gi|568164574|ref|YP_008948129.1| - 1.7e-05 24.9 0.2 1.9e-05 24.7 0.2 1.1 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily Csa1 PF06023.12 gi|568164575|ref|YP_008948130.1| - 1.4e-96 323.3 0.0 1.5e-96 323.2 0.0 1.0 1 0 0 1 1 1 1 CRISPR-associated exonuclease Csa1 Cas_Cas4 PF01930.17 gi|568164575|ref|YP_008948130.1| - 0.005 17.0 0.0 0.009 16.1 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function DUF83 HD_6 PF18019.1 gi|568164992|ref|YP_008948131.1| - 2.9e-05 24.3 0.0 0.00011 22.4 0.0 1.8 1 1 0 1 1 1 1 HD domain HD PF01966.22 gi|568164992|ref|YP_008948131.1| - 0.0014 18.8 0.6 0.0054 17.0 0.5 2.2 1 1 0 1 1 1 1 HD domain ResIII PF04851.15 gi|568164576|ref|YP_008948132.1| - 4.9e-10 39.7 0.3 1.4e-05 25.2 0.0 3.4 2 1 1 3 3 3 3 Type III restriction enzyme, res subunit Helicase_C PF00271.31 gi|568164576|ref|YP_008948132.1| - 7.5e-07 29.5 0.5 1.9e-06 28.2 0.5 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.29 gi|568164576|ref|YP_008948132.1| - 2.8e-05 24.0 0.2 0.00024 20.9 0.0 2.5 2 1 0 2 2 2 1 DEAD/DEAH box helicase Tae4 PF14113.6 gi|568164576|ref|YP_008948132.1| - 0.005 17.1 0.0 0.012 15.9 0.0 1.7 1 1 0 1 1 1 1 Type VI secretion system (T6SS), amidase effector protein 4 CbiA PF01656.23 gi|568164576|ref|YP_008948132.1| - 0.027 14.5 1.3 0.21 11.7 0.1 2.4 2 1 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain PAZ_siRNAbind PF12212.8 gi|568164576|ref|YP_008948132.1| - 0.63 9.9 5.0 0.37 10.6 1.3 2.4 2 1 0 3 3 3 0 PAZ domain PSD4 PF07631.11 gi|568164994|ref|YP_008948134.1| - 0.1 13.1 0.1 0.59 10.7 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1592) Cas_Cas5d PF09704.10 gi|568164577|ref|YP_008948135.1| - 0.0043 16.9 0.0 0.064 13.1 0.0 2.0 1 1 0 1 1 1 1 CRISPR-associated protein (Cas_Cas5) YqzE PF14038.6 gi|568164577|ref|YP_008948135.1| - 0.085 12.9 0.1 0.16 12.0 0.1 1.4 1 0 0 1 1 1 0 YqzE-like protein DevR PF01905.16 gi|568164578|ref|YP_008948136.1| - 5.4e-69 232.3 0.0 6.4e-69 232.0 0.0 1.1 1 0 0 1 1 1 1 CRISPR-associated negative auto-regulator DevR/Csa2 SopE_GEF PF07487.13 gi|568164578|ref|YP_008948136.1| - 0.0018 18.3 0.3 0.011 15.8 0.0 2.4 3 0 0 3 3 3 1 SopE GEF domain Cas_Csa5 PF09702.10 gi|568164579|ref|YP_008948137.1| - 0.00013 22.2 0.1 0.0062 16.8 0.0 2.1 1 1 1 2 2 2 2 CRISPR-associated protein (Cas_Csa5) RAMPs PF03787.15 gi|568164581|ref|YP_008948140.1| - 1.2e-20 74.4 0.0 2.7e-20 73.4 0.0 1.6 1 1 0 1 1 1 1 RAMP superfamily Toxin_34 PF08396.10 gi|568164581|ref|YP_008948140.1| - 0.015 16.0 1.8 0.024 15.4 1.8 1.3 1 0 0 1 1 1 0 Spider toxin omega agatoxin/Tx1 family RAMPs PF03787.15 gi|568164582|ref|YP_008948141.1| - 7.3e-23 81.7 0.1 2e-22 80.3 0.0 1.8 1 1 1 2 2 2 1 RAMP superfamily RAMPs PF03787.15 gi|568164583|ref|YP_008948142.1| - 2.5e-12 47.3 0.0 5.7e-12 46.1 0.0 1.8 1 1 0 1 1 1 1 RAMP superfamily HD PF01966.22 gi|568164584|ref|YP_008948143.1| - 3.5e-10 40.1 0.2 1.3e-09 38.3 0.1 2.2 2 0 0 2 2 2 1 HD domain GCH_III PF05165.12 gi|568164584|ref|YP_008948143.1| - 0.0035 16.6 0.0 1.3 8.2 0.0 2.2 2 0 0 2 2 2 2 GTP cyclohydrolase III FCH PF00611.23 gi|568164584|ref|YP_008948143.1| - 0.057 13.7 0.2 0.61 10.4 0.1 2.8 3 0 0 3 3 3 0 Fes/CIP4, and EFC/F-BAR homology domain TINF2_N PF14973.6 gi|568164584|ref|YP_008948143.1| - 0.068 13.5 0.0 0.32 11.3 0.0 2.2 1 0 0 1 1 1 0 TERF1-interacting nuclear factor 2 N-terminus BAR PF03114.18 gi|568164584|ref|YP_008948143.1| - 0.083 12.5 1.9 0.18 11.4 0.3 2.3 2 1 0 2 2 2 0 BAR domain HDOD PF08668.12 gi|568164584|ref|YP_008948143.1| - 0.14 11.7 0.0 0.27 10.7 0.0 1.5 1 0 0 1 1 1 0 HDOD domain Bap31_Bap29_C PF18035.1 gi|568164584|ref|YP_008948143.1| - 0.15 12.1 1.0 2.8 8.0 0.1 2.8 2 0 0 2 2 2 0 Bap31/Bap29 cytoplasmic coiled-coil domain FANCI_S3 PF14677.6 gi|568164584|ref|YP_008948143.1| - 0.91 9.2 5.5 22 4.7 0.3 3.6 4 0 0 4 4 4 0 FANCI solenoid 3 zf-piccolo PF05715.13 gi|568164584|ref|YP_008948143.1| - 2.3 8.4 6.2 0.73 10.0 0.2 2.3 2 0 0 2 2 2 0 Piccolo Zn-finger RAMPs PF03787.15 gi|568164585|ref|YP_008948144.1| - 1.9e-08 34.6 0.1 1.7e-07 31.5 0.1 2.1 1 1 0 1 1 1 1 RAMP superfamily RAMPs PF03787.15 gi|568164586|ref|YP_008948145.1| - 0.00016 21.8 0.4 0.00024 21.2 0.4 1.4 1 0 0 1 1 1 1 RAMP superfamily Ta0938 PF11494.8 gi|568164586|ref|YP_008948145.1| - 0.051 13.8 0.2 0.13 12.5 0.2 1.7 1 0 0 1 1 1 0 Ta0938 RAMPs PF03787.15 gi|568164587|ref|YP_008948146.1| - 1.3e-09 38.5 0.3 2e-09 37.8 0.3 1.3 1 0 0 1 1 1 1 RAMP superfamily KN17_SH3 PF18131.1 gi|568164587|ref|YP_008948146.1| - 0.15 12.2 1.0 0.32 11.1 0.0 2.1 2 1 0 2 2 2 0 KN17 SH3-like C-terminal domain Cas6_N PF17952.1 gi|568164588|ref|YP_008948147.1| - 2.6e-38 130.8 1.8 4.8e-38 130.0 1.8 1.4 1 0 0 1 1 1 1 Cas6 N-terminal domain CRISPR_Cas6 PF10040.9 gi|568164588|ref|YP_008948147.1| - 1.7e-16 60.6 0.0 2.7e-16 60.0 0.0 1.3 1 0 0 1 1 1 1 CRISPR-associated endoribonuclease Cas6 Cas_Cas6 PF01881.16 gi|568164588|ref|YP_008948147.1| - 0.019 15.5 1.0 0.019 15.5 1.0 2.0 1 1 1 2 2 2 0 CRISPR associated protein Cas6 Cas_Cmr3 PF09700.10 gi|568164588|ref|YP_008948147.1| - 0.16 11.4 0.0 0.23 10.9 0.0 1.2 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Cmr3) Cas_NE0113 PF09623.10 gi|568164589|ref|YP_008948148.1| - 0.00048 19.9 0.2 0.0019 17.9 0.2 1.8 1 1 0 1 1 1 1 CRISPR-associated protein NE0113 (Cas_NE0113) DUF4259 PF14078.6 gi|568164589|ref|YP_008948148.1| - 0.1 13.4 0.0 0.17 12.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4259) Cas_Cas02710 PF09670.10 gi|568164589|ref|YP_008948148.1| - 0.1 11.4 0.0 0.15 10.9 0.0 1.3 1 1 0 1 1 1 0 CRISPR-associated protein (Cas_Cas02710) T3SS_TC PF06511.11 gi|568164589|ref|YP_008948148.1| - 0.18 11.2 0.0 0.23 10.8 0.0 1.1 1 0 0 1 1 1 0 Type III secretion systems tip complex components AAA_16 PF13191.6 gi|568164997|ref|YP_008948150.1| - 3.6e-08 34.0 0.0 1.8e-07 31.7 0.0 2.0 1 1 1 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|568164997|ref|YP_008948150.1| - 1.2e-06 28.9 0.2 2e-05 24.9 0.1 2.7 2 1 0 2 2 2 1 AAA domain ATPase_2 PF01637.18 gi|568164997|ref|YP_008948150.1| - 0.00017 21.6 2.8 0.00023 21.1 0.6 2.2 2 1 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_18 PF13238.6 gi|568164997|ref|YP_008948150.1| - 0.00077 20.0 0.3 0.0022 18.5 0.1 2.0 2 0 0 2 2 2 1 AAA domain AAA_14 PF13173.6 gi|568164997|ref|YP_008948150.1| - 0.0036 17.3 0.4 0.19 11.7 0.1 2.9 2 1 0 3 3 3 1 AAA domain ResIII PF04851.15 gi|568164997|ref|YP_008948150.1| - 0.0062 16.6 0.1 0.021 14.8 0.1 1.9 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit AAA PF00004.29 gi|568164997|ref|YP_008948150.1| - 0.0087 16.5 0.9 0.12 12.8 0.3 2.8 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 gi|568164997|ref|YP_008948150.1| - 0.0094 15.7 0.5 0.039 13.7 0.5 2.0 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.6 gi|568164997|ref|YP_008948150.1| - 0.013 15.9 0.1 0.063 13.6 0.1 2.0 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|568164997|ref|YP_008948150.1| - 0.023 14.4 0.0 0.054 13.2 0.0 1.8 1 1 0 1 1 1 0 AAA domain DUF4872 PF16169.5 gi|568164997|ref|YP_008948150.1| - 0.029 14.1 0.0 0.17 11.7 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4872) NACHT PF05729.12 gi|568164997|ref|YP_008948150.1| - 0.059 13.3 0.6 0.37 10.7 0.0 2.4 3 0 0 3 3 3 0 NACHT domain GAT PF03127.14 gi|568164997|ref|YP_008948150.1| - 0.074 13.4 0.1 0.32 11.3 0.1 2.1 1 0 0 1 1 1 0 GAT domain DUF853 PF05872.12 gi|568164997|ref|YP_008948150.1| - 0.1 11.2 0.0 0.17 10.5 0.0 1.2 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF853) AAA_11 PF13086.6 gi|568164997|ref|YP_008948150.1| - 0.11 12.3 0.0 0.2 11.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain DrrA_P4M PF14860.6 gi|568164590|ref|YP_008948151.1| - 0.011 15.5 1.6 0.045 13.6 0.3 2.2 1 1 1 2 2 2 0 DrrA phosphatidylinositol 4-phosphate binding domain HTH_3 PF01381.22 gi|568164590|ref|YP_008948151.1| - 0.028 14.5 0.3 5.9 7.0 0.1 2.6 2 0 0 2 2 2 0 Helix-turn-helix Peptidase_M16 PF00675.20 gi|568164590|ref|YP_008948151.1| - 0.045 13.7 0.7 0.058 13.4 0.7 1.2 1 0 0 1 1 1 0 Insulinase (Peptidase family M16) DUF3781 PF12636.7 gi|568164590|ref|YP_008948151.1| - 0.072 13.0 1.2 0.2 11.6 0.3 2.1 3 0 0 3 3 3 0 Protein of unknown function (DUF3781) DUF1803 PF08820.10 gi|568164590|ref|YP_008948151.1| - 0.088 12.8 1.5 0.16 12.0 0.6 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF1803) PIN PF01850.21 gi|568164591|ref|YP_008948153.1| - 8.7e-07 29.5 0.2 1.1e-06 29.2 0.2 1.1 1 0 0 1 1 1 1 PIN domain PIN_2 PF10130.9 gi|568164591|ref|YP_008948153.1| - 0.033 14.4 0.0 0.042 14.1 0.0 1.1 1 0 0 1 1 1 0 PIN domain Choline_kin_N PF04428.14 gi|568164999|ref|YP_008948154.1| - 0.035 13.8 0.1 0.068 12.9 0.1 1.5 1 0 0 1 1 1 0 Choline kinase N terminus DUF3990 PF13151.6 gi|568164999|ref|YP_008948154.1| - 0.046 13.4 0.1 0.082 12.6 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3990) Vault_4 PF17796.1 gi|568164999|ref|YP_008948154.1| - 0.054 13.6 0.1 0.13 12.4 0.1 1.6 1 0 0 1 1 1 0 Major Vault Protein repeat domain NTS PF15447.6 gi|568164999|ref|YP_008948154.1| - 0.55 10.8 8.4 1.1 9.9 3.4 2.5 2 0 0 2 2 2 0 N-terminal segments of PfEMP1 Abhydrolase_1 PF00561.20 gi|568165000|ref|YP_008948155.1| - 0.00042 20.0 0.1 0.00052 19.7 0.1 1.1 1 0 0 1 1 1 1 alpha/beta hydrolase fold TAT_signal PF10518.9 gi|568165000|ref|YP_008948155.1| - 0.045 13.6 1.3 0.07 13.0 1.3 1.2 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence RIFIN PF02009.16 gi|568165001|ref|YP_008948156.1| - 0.0042 17.0 8.8 0.0056 16.6 8.8 1.1 1 0 0 1 1 1 1 Rifin Pex24p PF06398.11 gi|568165001|ref|YP_008948156.1| - 0.015 14.3 3.0 0.026 13.5 3.0 1.4 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Stevor PF17410.2 gi|568165001|ref|YP_008948156.1| - 0.079 12.5 3.7 0.12 11.9 3.7 1.3 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame DUF1180 PF06679.12 gi|568165001|ref|YP_008948156.1| - 0.74 10.2 4.4 1.2 9.5 4.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) AJAP1_PANP_C PF15298.6 gi|568165001|ref|YP_008948156.1| - 1.9 8.6 14.8 3.3 7.9 14.8 1.3 1 0 0 1 1 1 0 AJAP1/PANP C-terminus DUF2561 PF10812.8 gi|568165001|ref|YP_008948156.1| - 3.9 7.5 6.2 0.82 9.7 2.4 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2561) SCP2 PF02036.17 gi|568165003|ref|YP_008948158.1| - 0.012 16.1 0.0 0.024 15.1 0.0 1.5 1 0 0 1 1 1 0 SCP-2 sterol transfer family Acyl-CoA_dh_1 PF00441.24 gi|568164592|ref|YP_008948159.1| - 3.2e-43 147.5 4.1 5.2e-43 146.8 4.1 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|568164592|ref|YP_008948159.1| - 4.2e-32 111.1 0.1 1.7e-31 109.2 0.0 2.1 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|568164592|ref|YP_008948159.1| - 4.9e-27 94.0 0.0 9.2e-27 93.1 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|568164592|ref|YP_008948159.1| - 1.6e-19 70.5 2.6 3.3e-19 69.5 2.6 1.6 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain PucR PF07905.11 gi|568164592|ref|YP_008948159.1| - 0.018 15.3 0.0 0.52 10.6 0.0 2.6 2 0 0 2 2 2 0 Purine catabolism regulatory protein-like family CBM39 PF15886.5 gi|568164592|ref|YP_008948159.1| - 0.029 14.3 0.0 0.064 13.1 0.0 1.5 1 0 0 1 1 1 0 Carbohydrate binding domain (family 32) 3HCDH_N PF02737.18 gi|568164593|ref|YP_008948160.1| - 3.3e-63 212.8 1.6 5.1e-63 212.2 1.6 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ECH_1 PF00378.20 gi|568164593|ref|YP_008948160.1| - 6.9e-52 176.2 0.0 1.4e-51 175.2 0.0 1.5 2 0 0 2 2 2 1 Enoyl-CoA hydratase/isomerase 3HCDH PF00725.22 gi|568164593|ref|YP_008948160.1| - 6.6e-34 116.4 0.0 9.2e-24 83.9 0.0 2.6 2 0 0 2 2 2 2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ECH_2 PF16113.5 gi|568164593|ref|YP_008948160.1| - 4e-33 115.3 0.1 1.3e-29 103.7 0.0 3.0 2 1 1 3 3 3 2 Enoyl-CoA hydratase/isomerase NAD_Gly3P_dh_N PF01210.23 gi|568164593|ref|YP_008948160.1| - 5.8e-06 26.4 0.1 1.3e-05 25.2 0.1 1.6 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Pyr_redox PF00070.27 gi|568164593|ref|YP_008948160.1| - 1.1e-05 25.8 0.2 4.1e-05 24.1 0.2 2.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_2 PF03446.15 gi|568164593|ref|YP_008948160.1| - 3.6e-05 24.0 0.1 7.3e-05 23.0 0.1 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Pyr_redox_2 PF07992.14 gi|568164593|ref|YP_008948160.1| - 0.00051 19.4 0.1 0.00092 18.5 0.1 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Sacchrp_dh_NADP PF03435.18 gi|568164593|ref|YP_008948160.1| - 0.001 19.3 0.2 0.0022 18.2 0.2 1.6 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain AlaDh_PNT_C PF01262.21 gi|568164593|ref|YP_008948160.1| - 0.0024 17.2 0.5 0.005 16.2 0.5 1.5 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain UDPG_MGDP_dh_N PF03721.14 gi|568164593|ref|YP_008948160.1| - 0.0038 16.8 1.9 0.0044 16.6 0.3 2.0 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_7 PF13241.6 gi|568164593|ref|YP_008948160.1| - 0.0082 16.6 0.2 0.021 15.3 0.2 1.7 1 0 0 1 1 1 1 Putative NAD(P)-binding TrkA_N PF02254.18 gi|568164593|ref|YP_008948160.1| - 0.012 15.8 0.3 0.057 13.7 0.3 2.2 1 0 0 1 1 1 0 TrkA-N domain F420_oxidored PF03807.17 gi|568164593|ref|YP_008948160.1| - 0.073 13.7 1.4 0.23 12.1 0.6 2.3 2 1 0 2 2 1 0 NADP oxidoreductase coenzyme F420-dependent Rota_NSP4 PF01452.16 gi|568164593|ref|YP_008948160.1| - 0.16 11.6 3.5 0.18 11.5 1.4 2.0 2 0 0 2 2 2 0 Rotavirus non structural protein Ribonuc_red_lgN PF00317.21 gi|568164593|ref|YP_008948160.1| - 0.19 11.8 0.0 0.71 9.9 0.0 2.0 2 0 0 2 2 2 0 Ribonucleotide reductase, all-alpha domain Spore_YtfJ PF09579.10 gi|568164593|ref|YP_008948160.1| - 1.3 9.2 3.9 21 5.4 0.1 3.7 4 0 0 4 4 4 0 Sporulation protein YtfJ (Spore_YtfJ) SCP2 PF02036.17 gi|568164594|ref|YP_008948161.1| - 0.04 14.4 0.0 0.063 13.8 0.0 1.4 1 1 0 1 1 1 0 SCP-2 sterol transfer family Ribonuc_red_sm PF00268.21 gi|568165004|ref|YP_008948162.1| - 1.1e-17 64.5 1.5 1.5e-17 64.0 1.5 1.1 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain Haem_oxygenas_2 PF14518.6 gi|568165004|ref|YP_008948162.1| - 0.013 15.2 0.1 0.11 12.3 0.1 2.3 2 1 1 3 3 3 0 Iron-containing redox enzyme Rubrerythrin PF02915.17 gi|568165004|ref|YP_008948162.1| - 0.023 15.1 0.9 0.64 10.4 0.3 2.4 2 0 0 2 2 2 0 Rubrerythrin DUF973 PF06157.11 gi|568165005|ref|YP_008948163.1| - 3.4e-06 26.4 21.2 4.5e-06 26.0 21.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF973) DUF3487 PF11990.8 gi|568165005|ref|YP_008948163.1| - 8 6.4 15.6 0.79 9.6 5.3 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3487) COXG PF06240.13 gi|568165006|ref|YP_008948164.1| - 1.1e-08 34.9 0.0 1.2e-08 34.8 0.0 1.0 1 0 0 1 1 1 1 Carbon monoxide dehydrogenase subunit G (CoxG) ADH_N PF08240.12 gi|568164595|ref|YP_008948165.1| - 1.8e-30 105.0 0.4 3.1e-30 104.3 0.4 1.4 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|568164595|ref|YP_008948165.1| - 2e-24 86.0 0.0 5e-24 84.7 0.0 1.7 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|568164595|ref|YP_008948165.1| - 6.5e-07 30.5 0.0 1.1e-06 29.8 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 gi|568164595|ref|YP_008948165.1| - 1.7e-06 27.7 0.4 3e-06 26.9 0.4 1.3 1 1 0 1 1 1 1 Glucose dehydrogenase C-terminus 2-Hacid_dh_C PF02826.19 gi|568164595|ref|YP_008948165.1| - 0.0062 15.9 0.2 0.012 15.0 0.2 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.21 gi|568164595|ref|YP_008948165.1| - 0.009 15.3 3.8 0.012 15.0 3.2 1.4 1 1 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain PglD_N PF17836.1 gi|568164595|ref|YP_008948165.1| - 0.071 13.8 0.1 0.2 12.3 0.1 1.8 1 0 0 1 1 1 0 PglD N-terminal domain ThiF PF00899.21 gi|568164595|ref|YP_008948165.1| - 0.12 11.7 0.5 0.21 10.9 0.5 1.3 1 0 0 1 1 1 0 ThiF family Sacchrp_dh_NADP PF03435.18 gi|568164595|ref|YP_008948165.1| - 0.14 12.4 0.1 0.22 11.8 0.1 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain AMP-binding PF00501.28 gi|568164596|ref|YP_008948166.1| - 1.1e-92 310.9 0.0 1.4e-92 310.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|568164596|ref|YP_008948166.1| - 4.5e-18 66.0 0.1 8.3e-18 65.2 0.1 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain COXG PF06240.13 gi|568165007|ref|YP_008948167.1| - 4e-19 68.8 0.4 4.5e-19 68.6 0.4 1.0 1 0 0 1 1 1 1 Carbon monoxide dehydrogenase subunit G (CoxG) AhpC-TSA PF00578.21 gi|568164597|ref|YP_008948168.1| - 8.7e-34 116.1 0.0 1.1e-33 115.8 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|568164597|ref|YP_008948168.1| - 6.3e-21 74.6 0.0 7.2e-21 74.4 0.0 1.0 1 0 0 1 1 1 1 Redoxin DUF899 PF05988.12 gi|568164597|ref|YP_008948168.1| - 0.026 14.1 0.0 0.028 14.0 0.0 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF899) SCO1-SenC PF02630.14 gi|568164597|ref|YP_008948168.1| - 0.057 13.3 0.0 0.17 11.8 0.0 1.8 1 1 0 1 1 1 0 SCO1/SenC FPV060 PF17614.2 gi|568164597|ref|YP_008948168.1| - 0.067 12.6 0.0 0.09 12.1 0.0 1.2 1 0 0 1 1 1 0 Viral CC-type chemokine AhpC-TSA_2 PF13911.6 gi|568164597|ref|YP_008948168.1| - 0.12 12.5 0.0 0.2 11.8 0.0 1.3 1 1 0 1 1 1 0 AhpC/TSA antioxidant enzyme POR PF01558.18 gi|568164598|ref|YP_008948169.1| - 6.3e-35 120.8 0.5 7.5e-35 120.6 0.5 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase TPP_enzyme_C PF02775.21 gi|568164599|ref|YP_008948170.1| - 2.8e-20 72.7 0.0 5.7e-20 71.7 0.0 1.6 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.19 gi|568164599|ref|YP_008948170.1| - 1.1e-13 51.5 0.1 5.3e-13 49.2 0.0 1.9 2 0 0 2 2 2 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TPP_enzyme_N PF02776.18 gi|568164599|ref|YP_008948170.1| - 4.5e-10 39.4 0.6 9.3e-06 25.4 0.0 2.2 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Fer4 PF00037.27 gi|568164599|ref|YP_008948170.1| - 2.4e-09 36.6 15.2 2.6e-07 30.2 5.9 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|568164599|ref|YP_008948170.1| - 5.1e-09 36.6 4.5 1.3e-05 25.6 0.3 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|568164599|ref|YP_008948170.1| - 8.9e-07 28.7 22.7 2.1e-05 24.4 5.2 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|568164599|ref|YP_008948170.1| - 2e-06 27.9 10.3 4.2e-06 26.8 10.3 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|568164599|ref|YP_008948170.1| - 2.1e-06 27.8 12.0 4.4e-06 26.7 12.0 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|568164599|ref|YP_008948170.1| - 4.4e-06 26.5 18.8 0.00033 20.6 3.1 2.9 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|568164599|ref|YP_008948170.1| - 4.6e-05 23.5 12.8 7.9e-05 22.7 12.1 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|568164599|ref|YP_008948170.1| - 0.0002 22.2 7.3 0.0023 18.8 1.2 2.7 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Transketolase_C PF02780.20 gi|568164599|ref|YP_008948170.1| - 0.0011 18.9 0.3 0.0058 16.5 0.0 2.4 3 0 0 3 3 2 1 Transketolase, C-terminal domain Fer4_4 PF12800.7 gi|568164599|ref|YP_008948170.1| - 0.0011 19.3 12.6 0.0082 16.6 3.9 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|568164599|ref|YP_008948170.1| - 0.006 17.4 6.7 0.006 17.4 6.7 2.5 2 0 0 2 2 1 1 4Fe-4S binding domain Fer4_17 PF13534.6 gi|568164599|ref|YP_008948170.1| - 0.013 16.1 9.8 0.063 13.8 1.6 2.5 1 1 3 4 4 4 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|568164599|ref|YP_008948170.1| - 0.016 15.7 11.2 0.07 13.6 2.7 2.5 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|568164599|ref|YP_008948170.1| - 0.13 13.1 5.7 0.3 11.9 0.6 2.5 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|568164599|ref|YP_008948170.1| - 0.13 12.8 11.4 1.4 9.5 2.5 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|568164599|ref|YP_008948170.1| - 0.21 12.4 12.4 1 10.1 2.6 3.0 2 1 1 3 3 3 0 4Fe-4S single cluster domain Fer4_18 PF13746.6 gi|568164599|ref|YP_008948170.1| - 1.5 9.1 8.1 0.28 11.4 2.6 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain DUF35_N PF12172.8 gi|568164600|ref|YP_008948171.1| - 6.8e-11 41.8 0.0 1.1e-10 41.2 0.0 1.3 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) OB_aCoA_assoc PF01796.17 gi|568164600|ref|YP_008948171.1| - 7.5e-05 22.7 0.0 0.00011 22.1 0.0 1.3 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated DZR PF12773.7 gi|568164600|ref|YP_008948171.1| - 0.027 14.5 0.1 0.041 13.9 0.1 1.4 1 0 0 1 1 1 0 Double zinc ribbon zf-dskA_traR PF01258.17 gi|568164600|ref|YP_008948171.1| - 0.11 12.5 2.7 0.93 9.5 0.2 2.4 2 0 0 2 2 2 0 Prokaryotic dksA/traR C4-type zinc finger DUF35_N PF12172.8 gi|568164601|ref|YP_008948172.1| - 3.2e-08 33.3 0.1 5.9e-08 32.4 0.1 1.4 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) OB_aCoA_assoc PF01796.17 gi|568164601|ref|YP_008948172.1| - 0.0005 20.0 0.2 0.00074 19.5 0.2 1.3 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated zf-C6H2 PF15801.5 gi|568164601|ref|YP_008948172.1| - 0.21 11.9 0.5 0.21 11.9 0.5 1.6 2 0 0 2 2 2 0 zf-MYND-like zinc finger, mRNA-binding ADK_lid PF05191.14 gi|568164601|ref|YP_008948172.1| - 1.4 8.9 4.3 3.3 7.8 4.3 1.6 1 0 0 1 1 1 0 Adenylate kinase, active site lid Thiolase_N PF00108.23 gi|568164602|ref|YP_008948173.1| - 2.5e-13 50.0 0.3 5.2e-12 45.7 0.3 2.4 1 1 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|568164602|ref|YP_008948173.1| - 0.00088 18.9 0.0 0.87 9.2 0.0 2.5 2 0 0 2 2 2 2 Thiolase, C-terminal domain ACP_syn_III PF08545.10 gi|568164602|ref|YP_008948173.1| - 0.16 11.8 0.0 2.6 7.9 0.0 2.3 2 0 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Acyl-CoA_dh_1 PF00441.24 gi|568164604|ref|YP_008948175.1| - 2.7e-41 141.2 0.1 4.8e-41 140.5 0.1 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|568164604|ref|YP_008948175.1| - 5.2e-23 81.1 0.2 1.2e-22 79.9 0.0 1.7 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 gi|568164604|ref|YP_008948175.1| - 1.3e-15 58.0 0.0 3.1e-15 56.8 0.0 1.7 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 gi|568164604|ref|YP_008948175.1| - 2.1e-13 50.7 0.0 1.8e-12 47.7 0.0 2.1 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain AMP-binding PF00501.28 gi|568164605|ref|YP_008948176.1| - 8.9e-75 251.9 0.0 1.1e-74 251.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|568164605|ref|YP_008948176.1| - 2.2e-14 54.2 0.1 8.6e-14 52.3 0.0 2.1 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain ACAS_N PF16177.5 gi|568164605|ref|YP_008948176.1| - 1.4e-12 47.3 0.4 2.8e-12 46.4 0.4 1.6 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus CRISPR_Cas2 PF09827.9 gi|568164605|ref|YP_008948176.1| - 0.073 13.3 0.0 0.22 11.7 0.0 1.7 2 0 0 2 2 2 0 CRISPR associated protein Cas2 HTH_IclR PF09339.10 gi|568164606|ref|YP_008948177.1| - 3.9e-10 39.4 0.0 6.4e-10 38.7 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain TrmB PF01978.19 gi|568164606|ref|YP_008948177.1| - 5e-07 29.5 0.8 9.5e-07 28.6 0.2 1.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|568164606|ref|YP_008948177.1| - 1.3e-06 27.9 0.3 2.9e-06 26.8 0.3 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_27 PF13463.6 gi|568164606|ref|YP_008948177.1| - 2.9e-06 27.7 0.2 7.2e-06 26.4 0.2 1.7 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|568164606|ref|YP_008948177.1| - 1e-05 25.3 0.0 2.4e-05 24.1 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 gi|568164606|ref|YP_008948177.1| - 2.7e-05 24.1 0.0 4.5e-05 23.4 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|568164606|ref|YP_008948177.1| - 0.00053 19.8 0.0 0.00096 19.0 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_28 PF13518.6 gi|568164606|ref|YP_008948177.1| - 0.0017 18.4 0.0 0.0035 17.4 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_36 PF13730.6 gi|568164606|ref|YP_008948177.1| - 0.0038 17.1 0.0 0.012 15.6 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_23 PF13384.6 gi|568164606|ref|YP_008948177.1| - 0.019 14.7 0.0 0.034 14.0 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain NusG_II PF07009.11 gi|568164606|ref|YP_008948177.1| - 0.039 14.1 1.9 6.9 6.9 0.1 2.4 2 0 0 2 2 2 0 NusG domain II HTH_45 PF14947.6 gi|568164606|ref|YP_008948177.1| - 0.041 13.9 0.2 0.11 12.5 0.1 1.8 2 0 0 2 2 1 0 Winged helix-turn-helix AbiEi_4 PF13338.6 gi|568164606|ref|YP_008948177.1| - 0.086 13.0 0.4 0.18 12.0 0.4 1.5 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin RNA_pol_Rpc34 PF05158.12 gi|568164606|ref|YP_008948177.1| - 0.11 11.9 0.1 0.15 11.4 0.1 1.2 1 0 0 1 1 1 0 RNA polymerase Rpc34 subunit HTH_AsnC-type PF13404.6 gi|568164606|ref|YP_008948177.1| - 0.14 12.0 0.3 0.6 10.0 0.3 2.1 1 1 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_29 PF13551.6 gi|568164606|ref|YP_008948177.1| - 0.15 12.1 0.1 0.25 11.4 0.1 1.4 1 0 0 1 1 1 0 Winged helix-turn helix Phage_AlpA PF05930.12 gi|568164606|ref|YP_008948177.1| - 0.26 11.1 1.8 0.33 10.8 0.1 2.0 2 0 0 2 2 2 0 Prophage CP4-57 regulatory protein (AlpA) Big_9 PF17963.1 gi|568164607|ref|YP_008948178.1| - 0.57 11.0 3.5 29 5.5 3.5 2.3 1 1 0 1 1 1 0 Bacterial Ig domain Pilin_N PF07790.11 gi|568165008|ref|YP_008948179.1| - 0.013 16.4 0.9 0.027 15.4 0.3 1.8 2 0 0 2 2 2 0 Archaeal Type IV pilin, N-terminal CD34_antigen PF06365.12 gi|568165008|ref|YP_008948179.1| - 0.06 12.9 0.5 0.098 12.2 0.5 1.3 1 0 0 1 1 1 0 CD34/Podocalyxin family DUF4834 PF16118.5 gi|568165008|ref|YP_008948179.1| - 0.12 13.4 0.7 0.2 12.6 0.7 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) Zip PF02535.22 gi|568164608|ref|YP_008948180.1| - 0.0034 16.6 7.0 0.0034 16.6 7.0 2.7 2 1 0 3 3 3 2 ZIP Zinc transporter Flavin_Reduct PF01613.18 gi|568164609|ref|YP_008948181.1| - 4e-29 101.7 0.0 4.5e-29 101.5 0.0 1.0 1 0 0 1 1 1 1 Flavin reductase like domain DUF447 PF04289.12 gi|568164609|ref|YP_008948181.1| - 0.033 14.0 0.0 0.047 13.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF447) LigB PF02900.18 gi|568164610|ref|YP_008948182.1| - 9.6e-35 120.0 0.0 1.1e-34 119.8 0.0 1.0 1 0 0 1 1 1 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase Memo PF01875.17 gi|568164610|ref|YP_008948182.1| - 0.0076 15.4 0.0 0.024 13.8 0.0 1.8 1 1 1 2 2 2 1 Memo-like protein Ta0938 PF11494.8 gi|568164611|ref|YP_008948183.1| - 7.3e-57 190.1 5.3 8.1e-57 190.0 5.3 1.0 1 0 0 1 1 1 1 Ta0938 Phostensin PF13914.6 gi|568164611|ref|YP_008948183.1| - 0.11 13.1 0.1 0.14 12.8 0.1 1.1 1 0 0 1 1 1 0 Phostensin PP1-binding and SH3-binding region TENA_THI-4 PF03070.16 gi|568164612|ref|YP_008948184.1| - 4.8e-48 163.8 0.1 6.4e-48 163.3 0.1 1.1 1 0 0 1 1 1 1 TENA/THI-4/PQQC family zf-C2H2_9 PF16293.5 gi|568164612|ref|YP_008948184.1| - 8e-30 102.5 0.8 2.5e-29 100.9 0.8 1.9 2 0 0 2 2 2 1 C2H2 type zinc-finger (1 copy) Haem_oxygenas_2 PF14518.6 gi|568164612|ref|YP_008948184.1| - 1.4e-15 57.6 0.2 2.4e-15 56.8 0.1 1.5 2 0 0 2 2 2 1 Iron-containing redox enzyme Amidohydro_2 PF04909.14 gi|568164613|ref|YP_008948185.1| - 6.7e-25 88.5 0.0 7.9e-25 88.2 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase Amidohydro_1 PF01979.20 gi|568164613|ref|YP_008948185.1| - 0.03 13.7 0.0 0.19 11.0 0.0 1.9 1 1 0 1 1 1 0 Amidohydrolase family Amidohydro_2 PF04909.14 gi|568164614|ref|YP_008948186.1| - 2.8e-27 96.3 0.1 4.8e-27 95.5 0.0 1.4 2 0 0 2 2 2 1 Amidohydrolase Fer2_2 PF01799.20 gi|568164615|ref|YP_008948187.1| - 1.7e-21 76.0 0.4 1.7e-21 76.0 0.4 1.6 2 0 0 2 2 2 1 [2Fe-2S] binding domain Fer2 PF00111.27 gi|568164615|ref|YP_008948187.1| - 3.5e-06 26.9 0.1 3.5e-06 26.9 0.1 2.0 2 1 1 3 3 3 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 gi|568164615|ref|YP_008948187.1| - 3.8e-06 26.9 1.0 3.8e-06 26.9 1.0 1.7 2 1 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain zinc_ribbon_12 PF11331.8 gi|568164615|ref|YP_008948187.1| - 0.054 13.3 1.6 2.8 7.8 0.0 2.4 2 0 0 2 2 2 0 Probable zinc-ribbon domain Ald_Xan_dh_C2 PF02738.18 gi|568164616|ref|YP_008948188.1| - 3.3e-124 415.4 0.0 3.9e-124 415.1 0.0 1.0 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 gi|568164616|ref|YP_008948188.1| - 3.4e-11 43.5 0.0 6.5e-11 42.6 0.0 1.5 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Fer4_11 PF13247.6 gi|568164618|ref|YP_008948190.1| - 1.3e-18 66.9 9.3 1.3e-18 66.9 9.3 1.9 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|568164618|ref|YP_008948190.1| - 1.8e-12 47.6 25.9 3.3e-06 27.6 8.6 3.1 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4 PF00037.27 gi|568164618|ref|YP_008948190.1| - 3.8e-12 45.5 40.3 1.5e-07 30.9 3.0 5.2 6 0 0 6 6 5 4 4Fe-4S binding domain Fer4_6 PF12837.7 gi|568164618|ref|YP_008948190.1| - 5.1e-12 45.3 35.6 6.5e-07 29.2 2.1 4.5 4 1 0 4 4 4 4 4Fe-4S binding domain Fer4_9 PF13187.6 gi|568164618|ref|YP_008948190.1| - 8.3e-11 41.9 23.3 5.2e-06 26.5 10.8 3.2 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|568164618|ref|YP_008948190.1| - 1.3e-07 31.2 30.3 1.4e-05 24.9 1.5 4.5 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_10 PF13237.6 gi|568164618|ref|YP_008948190.1| - 2.7e-07 30.6 32.2 3.8e-05 23.7 8.7 3.3 1 1 2 3 3 3 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|568164618|ref|YP_008948190.1| - 1.1e-06 28.6 26.2 0.0018 18.4 7.0 2.9 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|568164618|ref|YP_008948190.1| - 2e-05 25.4 30.1 0.29 12.1 3.7 4.8 4 1 0 4 4 4 3 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|568164618|ref|YP_008948190.1| - 3.6e-05 23.9 32.0 0.0017 18.7 2.9 4.4 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_3 PF12798.7 gi|568164618|ref|YP_008948190.1| - 0.00037 21.2 40.5 0.052 14.5 2.5 4.3 4 0 0 4 4 4 3 4Fe-4S binding domain DmsC PF04976.12 gi|568164618|ref|YP_008948190.1| - 0.00041 19.9 9.2 0.00054 19.5 1.9 2.3 1 1 1 2 2 2 1 DMSO reductase anchor subunit (DmsC) Fer4_18 PF13746.6 gi|568164618|ref|YP_008948190.1| - 0.021 15.0 1.3 0.021 15.0 1.3 3.3 1 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|568164618|ref|YP_008948190.1| - 0.21 12.4 14.3 0.19 12.5 0.7 3.4 4 0 0 4 4 3 0 4Fe-4S single cluster domain DUF997 PF06196.12 gi|568164618|ref|YP_008948190.1| - 0.28 11.2 0.1 0.28 11.2 0.1 3.1 2 1 0 2 2 2 0 Protein of unknown function (DUF997) Fer4_8 PF13183.6 gi|568164618|ref|YP_008948190.1| - 0.43 11.1 31.1 36 4.9 9.4 4.1 2 2 1 3 3 3 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|568164618|ref|YP_008948190.1| - 0.44 11.1 27.2 0.31 11.6 1.4 4.4 2 1 4 6 6 6 0 4Fe-4S dicluster domain POR PF01558.18 gi|568164619|ref|YP_008948191.1| - 3.9e-33 115.0 0.0 6.5e-33 114.3 0.0 1.3 1 1 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase Fer4 PF00037.27 gi|568164620|ref|YP_008948192.1| - 7e-16 57.3 14.3 1.2e-08 34.4 4.2 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|568164620|ref|YP_008948192.1| - 9.9e-13 47.6 13.0 2.8e-06 27.1 3.5 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|568164620|ref|YP_008948192.1| - 4.2e-12 46.0 9.3 5.9e-12 45.5 9.3 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|568164620|ref|YP_008948192.1| - 1.3e-10 41.2 21.7 1e-07 31.9 11.8 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|568164620|ref|YP_008948192.1| - 3.7e-10 40.2 22.7 2.3e-08 34.5 12.9 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|568164620|ref|YP_008948192.1| - 3.9e-10 39.2 11.5 7.4e-05 22.6 1.3 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|568164620|ref|YP_008948192.1| - 1.1e-08 35.0 10.6 1.5e-08 34.7 10.6 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|568164620|ref|YP_008948192.1| - 4.7e-08 33.9 10.1 0.00056 20.8 2.2 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|568164620|ref|YP_008948192.1| - 6.3e-07 29.4 13.3 0.00074 19.8 1.7 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|568164620|ref|YP_008948192.1| - 3.5e-06 27.5 7.8 0.0015 19.0 0.4 2.2 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|568164620|ref|YP_008948192.1| - 4.3e-05 24.2 10.3 0.073 13.8 0.4 3.0 2 1 1 3 3 3 2 4Fe-4S single cluster domain Fer4_17 PF13534.6 gi|568164620|ref|YP_008948192.1| - 6.5e-05 23.4 6.7 0.03 14.9 0.2 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|568164620|ref|YP_008948192.1| - 0.00018 21.9 13.3 0.076 13.5 2.2 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|568164620|ref|YP_008948192.1| - 0.001 19.8 8.9 0.23 12.4 2.4 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|568164620|ref|YP_008948192.1| - 0.0026 18.6 18.7 0.083 13.9 7.2 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|568164620|ref|YP_008948192.1| - 0.7 10.1 11.0 1.2 9.3 1.1 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain POR_N PF01855.19 gi|568164621|ref|YP_008948193.1| - 3.2e-68 229.9 0.2 4e-68 229.6 0.2 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PFOR_II PF17147.4 gi|568164621|ref|YP_008948193.1| - 1.5e-27 95.9 0.1 3.3e-27 94.8 0.1 1.6 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Transketolase_C PF02780.20 gi|568164621|ref|YP_008948193.1| - 2.9e-05 23.9 0.0 6.5e-05 22.8 0.0 1.5 1 0 0 1 1 1 1 Transketolase, C-terminal domain TPP_enzyme_N PF02776.18 gi|568164621|ref|YP_008948193.1| - 0.00015 21.4 0.1 0.0019 17.8 0.2 2.2 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|568164622|ref|YP_008948194.1| - 3e-23 82.3 0.2 4.4e-23 81.8 0.2 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E1_dh PF00676.20 gi|568164622|ref|YP_008948194.1| - 0.00032 19.7 0.4 0.0005 19.1 0.4 1.2 1 0 0 1 1 1 1 Dehydrogenase E1 component DXP_synthase_N PF13292.6 gi|568164622|ref|YP_008948194.1| - 0.00036 19.8 0.5 0.00085 18.6 0.3 1.6 1 1 1 2 2 2 1 1-deoxy-D-xylulose-5-phosphate synthase CGGC PF08821.11 gi|568164622|ref|YP_008948194.1| - 0.095 12.9 0.1 0.41 10.8 0.0 2.0 2 0 0 2 2 2 0 CGGC domain Aldo_ket_red PF00248.21 gi|568164623|ref|YP_008948195.1| - 4.6e-60 203.3 0.0 2.5e-58 197.6 0.0 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family DUF5037 PF16440.5 gi|568164623|ref|YP_008948195.1| - 0.091 12.2 1.8 0.097 12.2 0.2 1.9 2 1 0 2 2 2 0 Domain of unknown function (DUF5037) TPP_enzyme_N PF02776.18 gi|568164624|ref|YP_008948196.1| - 7.7e-44 149.3 0.0 4.9e-42 143.5 0.0 2.2 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|568164624|ref|YP_008948196.1| - 5.4e-34 117.2 0.4 6.2e-33 113.7 0.1 2.4 2 1 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|568164624|ref|YP_008948196.1| - 2e-21 76.1 0.0 5e-21 74.9 0.0 1.7 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain DXP_synthase_N PF13292.6 gi|568164624|ref|YP_008948196.1| - 0.096 11.9 0.0 0.22 10.7 0.0 1.6 1 0 0 1 1 1 0 1-deoxy-D-xylulose-5-phosphate synthase DUF1404 PF07185.11 gi|568164625|ref|YP_008948197.1| - 3.2e-64 215.7 21.5 3.7e-64 215.5 21.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1404) ArAE_2_N PF10337.9 gi|568164627|ref|YP_008948199.1| - 0.78 8.7 8.9 1.9 7.5 7.0 2.0 1 1 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal Phage_holin_8 PF16931.5 gi|568164627|ref|YP_008948199.1| - 3.6 7.6 12.2 0.41 10.6 1.9 2.8 1 1 2 3 3 3 0 Putative phage holin COX2 PF00116.20 gi|568164628|ref|YP_008948200.1| - 7.3e-14 51.7 0.3 1.6e-12 47.4 0.0 2.1 1 1 1 2 2 2 2 Cytochrome C oxidase subunit II, periplasmic domain Cupredoxin_1 PF13473.6 gi|568164628|ref|YP_008948200.1| - 4.9e-06 26.6 0.0 7.2e-06 26.1 0.0 1.4 1 1 0 1 1 1 1 Cupredoxin-like domain DUF2436 PF10365.9 gi|568164628|ref|YP_008948200.1| - 0.065 13.0 0.3 0.14 11.9 0.2 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF2436) Cytochrom_B_N_2 PF13631.6 gi|568164629|ref|YP_008948201.1| - 3.4e-28 98.7 5.2 3.4e-28 98.7 5.2 2.5 2 1 0 2 2 2 1 Cytochrome b(N-terminal)/b6/petB Cytochrome_B PF00033.19 gi|568164629|ref|YP_008948201.1| - 2.6e-22 79.6 12.5 2.6e-22 79.6 12.5 2.2 2 0 0 2 2 2 1 Cytochrome b/b6/petB Cytochrom_B_C PF00032.17 gi|568164629|ref|YP_008948201.1| - 0.0011 19.2 0.7 0.0011 19.2 0.7 3.3 3 1 0 3 3 3 1 Cytochrome b(C-terminal)/b6/petD Neur_chan_memb PF02932.16 gi|568164629|ref|YP_008948201.1| - 0.94 9.5 3.7 0.58 10.2 1.4 1.8 2 0 0 2 2 2 0 Neurotransmitter-gated ion-channel transmembrane region Rieske PF00355.26 gi|568164630|ref|YP_008948202.1| - 6.2e-13 48.5 0.0 1.1e-12 47.7 0.0 1.4 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain TAT_signal PF10518.9 gi|568164630|ref|YP_008948202.1| - 0.35 10.8 0.0 0.35 10.8 0.0 1.7 2 0 0 2 2 2 0 TAT (twin-arginine translocation) pathway signal sequence SoxE PF06525.11 gi|568164631|ref|YP_008948203.1| - 2.9e-70 234.5 7.7 3.9e-70 234.1 7.7 1.2 1 0 0 1 1 1 1 Sulfocyanin (SoxE) domain Cu-oxidase_2 PF07731.14 gi|568164631|ref|YP_008948203.1| - 0.0052 16.5 0.3 0.41 10.4 0.0 2.6 2 1 1 3 3 3 2 Multicopper oxidase Copper-bind PF00127.20 gi|568164631|ref|YP_008948203.1| - 0.023 15.1 0.0 0.051 14.0 0.0 1.6 1 1 0 1 1 1 0 Copper binding proteins, plastocyanin/azurin family Tautomerase PF01361.21 gi|568165009|ref|YP_008948204.1| - 0.092 12.7 0.1 0.095 12.6 0.1 1.1 1 0 0 1 1 1 0 Tautomerase enzyme COX1 PF00115.20 gi|568164632|ref|YP_008948205.1| - 3.8e-121 405.0 56.2 3.8e-121 405.0 56.2 2.9 2 1 1 3 3 3 1 Cytochrome C and Quinol oxidase polypeptide I COX3 PF00510.18 gi|568164632|ref|YP_008948205.1| - 7.3e-17 62.1 15.4 7.3e-17 62.1 15.4 2.3 3 0 0 3 3 3 1 Cytochrome c oxidase subunit III RNA_pol_Rpc34 PF05158.12 gi|568164634|ref|YP_008948207.1| - 0.00012 21.6 0.1 0.00013 21.5 0.1 1.0 1 0 0 1 1 1 1 RNA polymerase Rpc34 subunit HTH_34 PF13601.6 gi|568164634|ref|YP_008948207.1| - 0.0017 18.5 0.1 0.0021 18.2 0.1 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain HxlR PF01638.17 gi|568164634|ref|YP_008948207.1| - 0.0043 16.9 0.6 0.0049 16.7 0.6 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_micro PF17007.5 gi|568164634|ref|YP_008948207.1| - 0.0066 15.3 0.3 0.0067 15.3 0.3 1.1 1 0 0 1 1 1 1 HTH-like TFIIE_alpha PF02002.17 gi|568164634|ref|YP_008948207.1| - 0.0066 16.3 0.3 0.0075 16.1 0.3 1.1 1 0 0 1 1 1 1 TFIIE alpha subunit TrmB PF01978.19 gi|568164634|ref|YP_008948207.1| - 0.0077 16.1 1.2 0.017 15.0 1.2 1.6 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|568164634|ref|YP_008948207.1| - 0.055 13.4 0.0 0.062 13.2 0.0 1.1 1 0 0 1 1 1 0 MarR family HTH_24 PF13412.6 gi|568164634|ref|YP_008948207.1| - 0.077 12.6 0.2 0.12 12.0 0.2 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 gi|568164634|ref|YP_008948207.1| - 0.11 12.4 0.7 0.16 11.9 0.7 1.1 1 0 0 1 1 1 0 HTH domain HTH_27 PF13463.6 gi|568164634|ref|YP_008948207.1| - 0.12 12.9 0.1 0.13 12.8 0.1 1.1 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_43 PF09904.9 gi|568164634|ref|YP_008948207.1| - 0.12 12.3 0.1 0.15 12.0 0.1 1.2 1 0 0 1 1 1 0 Winged helix-turn helix Rhodanese PF00581.20 gi|568164635|ref|YP_008948208.1| - 3.7e-12 46.7 0.0 5.9e-12 46.1 0.0 1.3 1 0 0 1 1 1 1 Rhodanese-like domain Ste5_C PF12194.8 gi|568164636|ref|YP_008948209.1| - 0.041 13.8 0.0 0.079 12.9 0.0 1.4 1 0 0 1 1 1 0 Protein kinase Fus3-binding FAD_binding_5 PF00941.21 gi|568164637|ref|YP_008948210.1| - 1.6e-50 171.1 0.0 2.4e-50 170.6 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain in molybdopterin dehydrogenase CO_deh_flav_C PF03450.17 gi|568164637|ref|YP_008948210.1| - 6.8e-26 90.4 0.0 1.3e-25 89.5 0.0 1.5 1 0 0 1 1 1 1 CO dehydrogenase flavoprotein C-terminal domain Fer2_2 PF01799.20 gi|568164638|ref|YP_008948211.1| - 2.6e-29 101.0 0.1 2.6e-29 101.0 0.1 1.9 2 0 0 2 2 2 1 [2Fe-2S] binding domain Fer2 PF00111.27 gi|568164638|ref|YP_008948211.1| - 0.00012 21.9 0.4 0.00012 21.9 0.4 2.1 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 gi|568164638|ref|YP_008948211.1| - 0.0004 20.4 2.2 0.0004 20.4 2.2 1.5 1 1 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Gly_rich_SFCGS PF14272.6 gi|568164638|ref|YP_008948211.1| - 0.084 12.9 0.1 0.56 10.2 0.0 2.0 1 1 1 2 2 2 0 Glycine-rich SFCGS Ald_Xan_dh_C2 PF02738.18 gi|568164639|ref|YP_008948212.1| - 7.4e-155 516.5 0.0 8.9e-155 516.3 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 gi|568164639|ref|YP_008948212.1| - 5.4e-25 87.9 0.0 1.7e-24 86.3 0.0 1.9 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Rubrerythrin PF02915.17 gi|568164640|ref|YP_008948213.1| - 2.9e-26 92.5 3.3 5.1e-26 91.7 3.3 1.4 1 1 0 1 1 1 1 Rubrerythrin Ferritin PF00210.24 gi|568164640|ref|YP_008948213.1| - 3.7e-11 43.1 1.8 4.4e-05 23.4 0.0 2.1 1 1 1 2 2 2 2 Ferritin-like domain FA_desaturase_2 PF03405.14 gi|568164640|ref|YP_008948213.1| - 0.0077 15.1 0.0 0.1 11.4 0.0 1.9 1 1 1 2 2 2 1 Fatty acid desaturase COQ7 PF03232.13 gi|568164640|ref|YP_008948213.1| - 0.037 13.8 1.0 6.3 6.6 0.1 2.0 2 0 0 2 2 2 0 Ubiquinone biosynthesis protein COQ7 MOR2-PAG1_C PF14225.6 gi|568164640|ref|YP_008948213.1| - 0.11 12.3 0.0 3.7 7.3 0.0 2.1 2 0 0 2 2 2 0 Cell morphogenesis C-terminal Ferritin_2 PF13668.6 gi|568164640|ref|YP_008948213.1| - 0.25 11.5 2.3 12 6.1 0.3 2.1 1 1 1 2 2 2 0 Ferritin-like domain CCG PF02754.16 gi|568164641|ref|YP_008948214.1| - 1.1e-18 67.2 3.2 9.4e-11 41.8 0.0 3.2 3 1 0 3 3 3 2 Cysteine-rich domain Fer4_7 PF12838.7 gi|568164641|ref|YP_008948214.1| - 4e-05 24.1 5.6 0.00013 22.4 5.6 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|568164641|ref|YP_008948214.1| - 5.5e-05 23.6 6.7 0.00032 21.2 6.7 2.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|568164641|ref|YP_008948214.1| - 0.00013 22.1 4.9 0.0003 20.9 4.9 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|568164641|ref|YP_008948214.1| - 0.0014 19.0 12.7 0.016 15.7 1.5 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|568164641|ref|YP_008948214.1| - 0.0025 18.2 10.2 0.028 14.8 10.7 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|568164641|ref|YP_008948214.1| - 0.019 14.7 13.0 0.25 11.2 2.1 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_16 PF13484.6 gi|568164641|ref|YP_008948214.1| - 0.052 14.5 5.0 5.1 8.1 0.9 2.7 2 0 0 2 2 2 0 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|568164641|ref|YP_008948214.1| - 0.11 12.6 10.0 0.13 12.4 1.0 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_6 PF12837.7 gi|568164641|ref|YP_008948214.1| - 0.19 11.9 13.7 0.27 11.4 2.2 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain ATP-synt_ab_C PF00306.27 gi|568164641|ref|YP_008948214.1| - 0.19 12.0 0.3 41 4.5 0.2 2.9 3 0 0 3 3 3 0 ATP synthase alpha/beta chain, C terminal domain Fer4_10 PF13237.6 gi|568164641|ref|YP_008948214.1| - 0.59 10.3 13.2 1.3 9.2 2.2 2.6 2 1 1 3 3 2 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|568164641|ref|YP_008948214.1| - 1.7 8.8 13.3 28 4.9 13.4 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain DUF3501 PF12007.8 gi|568164642|ref|YP_008948215.1| - 1e-30 107.1 0.0 1.2e-30 106.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3501) DUF2089 PF09862.9 gi|568165010|ref|YP_008948216.1| - 0.068 13.2 0.8 0.43 10.6 0.9 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2089) Elf4 PF07011.11 gi|568165010|ref|YP_008948216.1| - 0.068 13.1 0.5 0.1 12.5 0.5 1.3 1 0 0 1 1 1 0 Early Flowering 4 domain Eno-Rase_FAD_bd PF07055.12 gi|568165010|ref|YP_008948216.1| - 0.14 12.6 0.0 0.31 11.5 0.0 1.5 1 0 0 1 1 1 0 Enoyl reductase FAD binding domain Nas2_N PF18265.1 gi|568165010|ref|YP_008948216.1| - 0.19 11.7 1.9 25 4.9 0.1 3.0 2 1 1 3 3 3 0 Nas2 N_terminal domain AIRS_C PF02769.22 gi|568164643|ref|YP_008948217.1| - 8.8e-15 55.2 0.0 1.5e-14 54.4 0.0 1.4 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|568164643|ref|YP_008948217.1| - 1.8e-11 44.6 0.0 3.3e-11 43.7 0.0 1.3 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain Pro-kuma_activ PF09286.11 gi|568164644|ref|YP_008948218.1| - 1.6e-24 86.8 0.2 3.7e-24 85.6 0.2 1.7 1 0 0 1 1 1 1 Pro-kumamolisin, activation domain Big_7 PF17957.1 gi|568164644|ref|YP_008948218.1| - 7.1e-09 36.3 2.7 7.1e-09 36.3 2.7 6.3 7 0 0 7 7 7 1 Bacterial Ig domain Peptidase_S8 PF00082.22 gi|568164644|ref|YP_008948218.1| - 3.3e-06 26.6 1.1 3.3e-06 26.6 1.1 2.0 2 0 0 2 2 2 1 Subtilase family MG2 PF01835.19 gi|568164644|ref|YP_008948218.1| - 0.00066 20.1 0.3 0.57 10.7 0.0 4.1 4 0 0 4 4 4 1 MG2 domain TcfC PF16967.5 gi|568164644|ref|YP_008948218.1| - 0.0027 17.2 0.3 0.01 15.3 0.3 2.0 1 0 0 1 1 1 1 E-set like domain DJ-1_PfpI PF01965.24 gi|568164645|ref|YP_008948219.1| - 2.9e-51 173.5 0.0 3.3e-51 173.4 0.0 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family GATase PF00117.28 gi|568164645|ref|YP_008948219.1| - 0.0056 16.5 0.0 0.0066 16.2 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|568164645|ref|YP_008948219.1| - 0.032 14.0 0.0 0.039 13.7 0.0 1.3 1 0 0 1 1 1 0 Peptidase C26 ThiJ_like PF17124.5 gi|568164645|ref|YP_008948219.1| - 0.16 11.7 0.0 0.2 11.3 0.0 1.3 1 0 0 1 1 1 0 ThiJ/PfpI family-like TPP_enzyme_N PF02776.18 gi|568164648|ref|YP_008948222.1| - 3.1e-40 137.6 0.0 5.1e-40 136.9 0.0 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|568164648|ref|YP_008948222.1| - 2.3e-17 63.2 0.2 7.5e-16 58.3 0.0 2.4 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|568164648|ref|YP_008948222.1| - 0.00011 22.0 0.0 0.0029 17.3 0.0 2.5 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain DXP_synthase_N PF13292.6 gi|568164648|ref|YP_008948222.1| - 0.17 11.0 0.0 1.4 8.1 0.0 2.1 2 0 0 2 2 2 0 1-deoxy-D-xylulose-5-phosphate synthase Sugar_tr PF00083.24 gi|568164649|ref|YP_008948223.1| - 8.8e-31 107.2 31.3 1.1e-23 83.9 10.9 2.0 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.16 gi|568164649|ref|YP_008948223.1| - 1e-24 87.1 63.9 1.5e-19 70.1 30.7 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily TENA_THI-4 PF03070.16 gi|568164650|ref|YP_008948224.1| - 5.1e-15 55.9 0.2 5.2e-14 52.6 0.2 2.4 1 1 0 1 1 1 1 TENA/THI-4/PQQC family Acetyltransf_1 PF00583.25 gi|568164651|ref|YP_008948225.1| - 3.2e-12 46.7 0.0 4.1e-12 46.4 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.7 gi|568164651|ref|YP_008948225.1| - 8e-09 36.3 0.0 1.1e-08 35.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|568164651|ref|YP_008948225.1| - 3.8e-08 33.3 0.0 4.6e-08 33.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|568164651|ref|YP_008948225.1| - 3e-07 30.8 0.1 6.1e-07 29.8 0.1 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|568164651|ref|YP_008948225.1| - 1.1e-06 28.5 0.0 1.8e-06 27.8 0.0 1.4 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 gi|568164651|ref|YP_008948225.1| - 0.0008 19.5 0.2 0.58 10.2 0.0 2.2 1 1 1 2 2 2 2 Acetyltransferase (GNAT) domain SinI PF08671.10 gi|568164651|ref|YP_008948225.1| - 0.0073 16.1 0.4 0.013 15.3 0.4 1.4 1 0 0 1 1 1 1 Anti-repressor SinI GNAT_acetyltran PF12746.7 gi|568164651|ref|YP_008948225.1| - 0.0099 15.5 0.0 0.016 14.8 0.0 1.3 1 0 0 1 1 1 1 GNAT acetyltransferase Acetyltransf_4 PF13420.7 gi|568164651|ref|YP_008948225.1| - 0.086 13.0 0.5 0.35 11.0 0.5 2.0 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|568164651|ref|YP_008948225.1| - 0.12 12.6 0.0 0.33 11.1 0.0 1.7 2 0 0 2 2 2 0 GCN5-related N-acetyl-transferase ECH_1 PF00378.20 gi|568164652|ref|YP_008948226.1| - 2.1e-48 164.9 0.0 2.3e-48 164.7 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|568164652|ref|YP_008948226.1| - 1.4e-26 93.8 0.0 1.4e-23 83.9 0.0 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase ECH_1 PF00378.20 gi|568164653|ref|YP_008948227.1| - 1.6e-82 276.6 0.1 1.9e-82 276.4 0.1 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|568164653|ref|YP_008948227.1| - 1e-38 133.7 0.4 6.1e-35 121.3 0.1 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase Peptidase_S49 PF01343.18 gi|568164653|ref|YP_008948227.1| - 0.00026 21.0 0.1 0.0017 18.3 0.0 2.1 2 0 0 2 2 2 1 Peptidase family S49 VapB_antitoxin PF09957.9 gi|568164653|ref|YP_008948227.1| - 0.068 13.1 1.7 1.9 8.4 0.6 3.2 2 1 0 2 2 2 0 Bacterial antitoxin of type II TA system, VapB Thiolase_N PF00108.23 gi|568164654|ref|YP_008948228.1| - 5.4e-21 75.1 0.5 1.1e-19 70.8 0.5 2.1 1 1 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|568164654|ref|YP_008948228.1| - 7.2e-10 38.6 0.2 1.1e-08 34.7 0.0 2.6 3 0 0 3 3 3 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|568164654|ref|YP_008948228.1| - 1.6e-06 27.9 4.2 0.00051 19.7 2.3 2.5 1 1 1 2 2 2 2 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III PF08545.10 gi|568164654|ref|YP_008948228.1| - 0.062 13.2 0.7 0.13 12.1 0.7 1.5 1 0 0 1 1 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Ketoacyl-synt_C PF02801.22 gi|568164654|ref|YP_008948228.1| - 1.7 8.7 7.5 6.3 6.8 0.0 3.6 5 0 0 5 5 5 0 Beta-ketoacyl synthase, C-terminal domain 4HBT PF03061.22 gi|568164655|ref|YP_008948229.1| - 1.3e-11 44.7 0.0 2.1e-11 44.0 0.0 1.4 1 0 0 1 1 1 1 Thioesterase superfamily DUF4442 PF14539.6 gi|568164655|ref|YP_008948229.1| - 7.3e-05 22.9 0.0 0.0001 22.4 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4442) 4HBT_3 PF13622.6 gi|568164655|ref|YP_008948229.1| - 0.045 14.0 0.0 0.056 13.7 0.0 1.1 1 0 0 1 1 1 0 Thioesterase-like superfamily INCA1 PF15142.6 gi|568164655|ref|YP_008948229.1| - 0.057 13.4 0.0 0.23 11.4 0.0 2.0 2 1 1 3 3 3 0 INCA1 PS-DH PF14765.6 gi|568164655|ref|YP_008948229.1| - 0.17 11.1 0.0 0.21 10.8 0.0 1.2 1 0 0 1 1 1 0 Polyketide synthase dehydratase AMP-binding_C_2 PF14535.6 gi|568164656|ref|YP_008948230.1| - 9.2e-15 54.7 0.6 2.3e-14 53.5 0.6 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 gi|568164656|ref|YP_008948230.1| - 2.3e-13 49.6 0.1 3.3e-13 49.0 0.1 1.2 1 0 0 1 1 1 1 AMP-binding enzyme GH3 PF03321.13 gi|568164656|ref|YP_008948230.1| - 0.00014 20.9 0.2 0.13 11.1 0.1 2.1 2 0 0 2 2 2 2 GH3 auxin-responsive promoter OB_aCoA_assoc PF01796.17 gi|568164657|ref|YP_008948231.1| - 5.7e-13 48.7 0.1 1.1e-12 47.8 0.1 1.5 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated DUF35_N PF12172.8 gi|568164657|ref|YP_008948231.1| - 2e-12 46.7 0.0 3.3e-12 46.0 0.0 1.3 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) TFIIS_C PF01096.18 gi|568164657|ref|YP_008948231.1| - 0.0015 18.4 0.2 0.2 11.5 0.0 2.2 2 0 0 2 2 2 2 Transcription factor S-II (TFIIS) NOB1_Zn_bind PF08772.11 gi|568164657|ref|YP_008948231.1| - 0.0068 16.6 0.0 0.0099 16.0 0.0 1.3 1 0 0 1 1 1 1 Nin one binding (NOB1) Zn-ribbon like TackOD1 PF18551.1 gi|568164657|ref|YP_008948231.1| - 0.017 14.8 0.2 0.022 14.5 0.2 1.1 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 HypA PF01155.19 gi|568164657|ref|YP_008948231.1| - 0.096 12.7 0.1 0.13 12.3 0.1 1.2 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Rubrerythrin PF02915.17 gi|568164658|ref|YP_008948232.1| - 1.8e-05 25.2 0.2 6e-05 23.5 0.1 1.9 2 0 0 2 2 2 1 Rubrerythrin AurF PF11583.8 gi|568164658|ref|YP_008948232.1| - 0.00054 19.3 1.5 0.00095 18.5 0.0 2.1 2 1 0 2 2 2 1 P-aminobenzoate N-oxygenase AurF FA_desaturase_2 PF03405.14 gi|568164658|ref|YP_008948232.1| - 0.00058 18.8 0.1 0.38 9.5 0.1 2.2 2 0 0 2 2 2 2 Fatty acid desaturase DUF4932 PF16286.5 gi|568164658|ref|YP_008948232.1| - 0.011 15.1 0.4 0.014 14.7 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4932) FAA_hydrolase PF01557.18 gi|568164659|ref|YP_008948233.1| - 5e-41 140.8 0.0 6.2e-41 140.5 0.0 1.1 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family HpaB_N PF11794.8 gi|568164660|ref|YP_008948234.1| - 1.7e-84 283.7 0.0 2.3e-84 283.3 0.0 1.1 1 0 0 1 1 1 1 4-hydroxyphenylacetate 3-hydroxylase N terminal HpaB PF03241.13 gi|568164660|ref|YP_008948234.1| - 1.8e-52 177.4 0.0 2.9e-52 176.7 0.0 1.2 1 0 0 1 1 1 1 4-hydroxyphenylacetate 3-hydroxylase C terminal Glyoxalase PF00903.25 gi|568164661|ref|YP_008948235.1| - 2.3e-22 79.5 0.6 7.8e-11 42.3 0.1 2.3 2 0 0 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 gi|568164661|ref|YP_008948235.1| - 1.2e-06 28.7 0.0 0.76 10.1 0.0 3.4 2 2 1 3 3 3 3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.6 gi|568164661|ref|YP_008948235.1| - 0.024 14.7 0.2 2.6 8.1 0.0 3.0 3 1 1 4 4 4 0 Glyoxalase-like domain Pfk_N PF18468.1 gi|568164661|ref|YP_008948235.1| - 0.039 14.4 0.1 0.11 12.9 0.1 1.8 1 0 0 1 1 1 0 Phosphofructokinase N-terminal domain yeast HTH_10 PF04967.12 gi|568164662|ref|YP_008948236.1| - 2.9e-20 71.8 0.1 5.5e-20 70.9 0.1 1.5 1 0 0 1 1 1 1 HTH DNA binding domain HTH_24 PF13412.6 gi|568164662|ref|YP_008948236.1| - 0.014 14.9 0.3 1.2 8.7 0.0 2.9 3 0 0 3 3 3 0 Winged helix-turn-helix DNA-binding Homeodomain PF00046.29 gi|568164662|ref|YP_008948236.1| - 0.038 13.8 0.0 0.11 12.4 0.0 1.7 1 0 0 1 1 1 0 Homeodomain DUF1492 PF07374.11 gi|568164662|ref|YP_008948236.1| - 0.056 13.6 0.4 3.3 7.9 0.0 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF1492) Pirin PF02678.16 gi|568164663|ref|YP_008948237.1| - 8.7e-36 122.2 0.1 3.6e-35 120.2 0.0 2.0 2 0 0 2 2 2 1 Pirin Pirin_C PF05726.13 gi|568164663|ref|YP_008948237.1| - 3.6e-24 85.1 0.0 8.3e-24 83.9 0.0 1.6 2 0 0 2 2 2 1 Pirin C-terminal cupin domain AMP-binding PF00501.28 gi|568164664|ref|YP_008948238.1| - 2.2e-64 217.6 0.0 2.9e-64 217.2 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|568164664|ref|YP_008948238.1| - 2e-18 67.1 0.0 4.5e-18 66.0 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain ACAS_N PF16177.5 gi|568164664|ref|YP_008948238.1| - 1.3e-09 37.8 1.2 1.3e-09 37.8 1.2 2.5 2 1 0 2 2 2 1 Acetyl-coenzyme A synthetase N-terminus Pterin_4a PF01329.19 gi|568164665|ref|YP_008948239.1| - 2.8e-30 104.3 0.0 3e-30 104.2 0.0 1.0 1 0 0 1 1 1 1 Pterin 4 alpha carbinolamine dehydratase DUF1965 PF09248.10 gi|568164665|ref|YP_008948239.1| - 0.1 12.4 0.1 0.14 11.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1965) Oxidored_FMN PF00724.20 gi|568164666|ref|YP_008948240.1| - 2.6e-59 201.2 0.0 3.8e-59 200.7 0.0 1.2 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family NAD_binding_8 PF13450.6 gi|568164666|ref|YP_008948240.1| - 3e-09 37.0 0.0 7.9e-09 35.6 0.0 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|568164666|ref|YP_008948240.1| - 2.4e-08 33.5 0.0 4.9e-08 32.6 0.0 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|568164666|ref|YP_008948240.1| - 5.3e-08 33.3 0.9 1.1e-06 29.1 0.4 2.8 2 1 0 2 2 1 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|568164666|ref|YP_008948240.1| - 1.4e-05 24.8 0.0 0.00045 19.9 0.0 2.3 2 0 0 2 2 2 1 FAD dependent oxidoreductase Dus PF01207.17 gi|568164666|ref|YP_008948240.1| - 0.00064 18.9 0.0 0.016 14.3 0.0 2.7 2 1 1 3 3 3 1 Dihydrouridine synthase (Dus) HI0933_like PF03486.14 gi|568164666|ref|YP_008948240.1| - 0.0013 17.6 0.2 0.029 13.1 0.2 2.1 2 0 0 2 2 2 1 HI0933-like protein FAD_binding_3 PF01494.19 gi|568164666|ref|YP_008948240.1| - 0.0032 16.8 0.2 0.0049 16.2 0.2 1.2 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_3 PF13738.6 gi|568164666|ref|YP_008948240.1| - 0.0032 16.8 0.0 0.0053 16.1 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 gi|568164666|ref|YP_008948240.1| - 0.0033 17.3 0.0 0.0058 16.5 0.0 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BtpA PF03437.15 gi|568164666|ref|YP_008948240.1| - 0.0038 16.7 0.0 0.032 13.7 0.0 2.2 2 0 0 2 2 2 1 BtpA family AlaDh_PNT_C PF01262.21 gi|568164666|ref|YP_008948240.1| - 0.004 16.5 0.0 0.0069 15.7 0.0 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.17 gi|568164666|ref|YP_008948240.1| - 0.0056 15.9 0.1 0.01 15.1 0.1 1.3 1 0 0 1 1 1 1 Thi4 family GIDA PF01134.22 gi|568164666|ref|YP_008948240.1| - 0.0069 15.5 0.0 0.011 14.9 0.0 1.3 1 0 0 1 1 1 1 Glucose inhibited division protein A Amino_oxidase PF01593.24 gi|568164666|ref|YP_008948240.1| - 0.024 13.9 0.0 0.04 13.2 0.0 1.4 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase NAD_Gly3P_dh_N PF01210.23 gi|568164666|ref|YP_008948240.1| - 0.025 14.5 0.0 0.079 12.9 0.0 1.9 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FAD_oxidored PF12831.7 gi|568164666|ref|YP_008948240.1| - 0.16 11.2 0.0 0.3 10.4 0.0 1.4 1 0 0 1 1 1 0 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|568164666|ref|YP_008948240.1| - 0.2 10.7 0.1 0.3 10.1 0.1 1.2 1 0 0 1 1 1 0 FAD binding domain Tricorn_PDZ PF14685.6 gi|568164667|ref|YP_008948241.1| - 3.8e-23 81.3 0.0 1.2e-22 79.6 0.0 1.9 2 0 0 2 2 2 1 Tricorn protease PDZ domain Tricorn_C1 PF14684.6 gi|568164667|ref|YP_008948241.1| - 2.3e-22 78.8 1.9 7.1e-22 77.3 1.9 1.9 1 0 0 1 1 1 1 Tricorn protease C1 domain Peptidase_S41 PF03572.18 gi|568164667|ref|YP_008948241.1| - 1.8e-21 76.4 0.0 3.9e-21 75.3 0.0 1.6 1 0 0 1 1 1 1 Peptidase family S41 PD40 PF07676.12 gi|568164667|ref|YP_008948241.1| - 2.6e-12 46.3 14.8 2.8e-05 23.9 1.2 5.7 6 0 0 6 6 6 4 WD40-like Beta Propeller Repeat DPPIV_N PF00930.21 gi|568164667|ref|YP_008948241.1| - 0.00086 18.2 0.6 1 8.1 0.0 4.3 3 2 1 4 4 4 2 Dipeptidyl peptidase IV (DPP IV) N-terminal region SdiA-regulated PF06977.11 gi|568164667|ref|YP_008948241.1| - 0.11 11.7 0.1 0.24 10.6 0.1 1.5 1 0 0 1 1 1 0 SdiA-regulated ABC_tran PF00005.27 gi|568164668|ref|YP_008948242.1| - 4.3e-24 85.6 0.1 9.2e-24 84.5 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|568164668|ref|YP_008948242.1| - 4.3e-13 49.8 0.0 1.6e-08 34.7 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|568164668|ref|YP_008948242.1| - 0.00035 20.1 0.3 0.24 10.8 0.0 2.2 1 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA PF00004.29 gi|568164668|ref|YP_008948242.1| - 0.0022 18.4 0.2 0.008 16.6 0.0 2.0 3 0 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.6 gi|568164668|ref|YP_008948242.1| - 0.018 14.8 0.3 0.035 13.9 0.3 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|568164668|ref|YP_008948242.1| - 0.022 15.3 0.3 0.027 15.0 0.2 1.6 1 1 0 1 1 1 0 AAA domain AAA_15 PF13175.6 gi|568164668|ref|YP_008948242.1| - 0.022 14.5 0.0 1.5 8.5 0.2 2.3 1 1 1 2 2 2 0 AAA ATPase domain Rad17 PF03215.15 gi|568164668|ref|YP_008948242.1| - 0.032 14.2 0.1 0.1 12.5 0.0 1.8 2 0 0 2 2 2 0 Rad17 P-loop domain NB-ARC PF00931.22 gi|568164668|ref|YP_008948242.1| - 0.032 13.4 0.5 0.16 11.2 0.0 2.0 2 1 0 2 2 2 0 NB-ARC domain AAA_16 PF13191.6 gi|568164668|ref|YP_008948242.1| - 0.036 14.5 0.0 0.05 14.0 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 gi|568164668|ref|YP_008948242.1| - 0.037 13.9 0.5 0.073 13.0 0.1 1.7 2 0 0 2 2 2 0 RsgA GTPase DUF4959 PF16323.5 gi|568164668|ref|YP_008948242.1| - 0.045 14.1 0.1 0.083 13.2 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4959) AAA_13 PF13166.6 gi|568164668|ref|YP_008948242.1| - 0.06 12.0 0.1 0.087 11.5 0.1 1.2 1 0 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 gi|568164668|ref|YP_008948242.1| - 0.069 13.4 0.0 0.75 10.1 0.0 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit DUF87 PF01935.17 gi|568164668|ref|YP_008948242.1| - 0.095 12.8 1.0 0.37 10.8 0.2 2.0 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_22 PF13401.6 gi|568164668|ref|YP_008948242.1| - 0.13 12.6 0.1 0.32 11.3 0.1 1.8 1 1 1 2 2 2 0 AAA domain NACHT PF05729.12 gi|568164668|ref|YP_008948242.1| - 0.13 12.2 0.2 0.53 10.2 0.1 2.0 2 0 0 2 2 2 0 NACHT domain ABC2_membrane PF01061.24 gi|568164669|ref|YP_008948243.1| - 3.7e-05 23.3 27.2 3.7e-05 23.3 27.2 1.5 2 0 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|568164669|ref|YP_008948243.1| - 0.00082 18.6 35.4 0.00082 18.6 35.4 1.9 1 1 1 2 2 2 1 ABC-2 family transporter protein Tmemb_14 PF03647.13 gi|568164669|ref|YP_008948243.1| - 0.17 12.6 10.8 0.038 14.7 7.0 1.9 2 0 0 2 2 2 0 Transmembrane proteins 14C ABC2_membrane_2 PF12679.7 gi|568164670|ref|YP_008948244.1| - 4.2e-15 55.8 29.8 4.3e-14 52.5 29.8 1.9 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|568164670|ref|YP_008948244.1| - 0.00038 20.5 21.9 0.00038 20.5 21.9 2.4 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 gi|568164670|ref|YP_008948244.1| - 0.34 10.0 44.5 0.0062 15.7 36.3 1.8 1 1 1 2 2 2 0 ABC-2 family transporter protein ABC_tran PF00005.27 gi|568164671|ref|YP_008948245.1| - 1.5e-26 93.5 0.1 6e-26 91.6 0.0 1.8 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|568164671|ref|YP_008948245.1| - 6.7e-07 29.4 2.1 0.014 15.2 0.2 2.5 2 1 1 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|568164671|ref|YP_008948245.1| - 0.00026 21.6 0.4 0.00093 19.9 0.4 2.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) TsaE PF02367.17 gi|568164671|ref|YP_008948245.1| - 0.0076 16.3 0.1 0.017 15.1 0.1 1.5 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_16 PF13191.6 gi|568164671|ref|YP_008948245.1| - 0.011 16.1 0.0 0.019 15.3 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain AAA_30 PF13604.6 gi|568164671|ref|YP_008948245.1| - 0.012 15.3 0.1 0.018 14.8 0.1 1.5 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 gi|568164671|ref|YP_008948245.1| - 0.012 16.0 0.2 0.065 13.7 0.2 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.6 gi|568164671|ref|YP_008948245.1| - 0.014 15.1 0.1 0.03 14.0 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain RelA_SpoT PF04607.17 gi|568164671|ref|YP_008948245.1| - 0.049 13.9 0.6 0.15 12.3 0.6 1.9 1 1 0 1 1 1 0 Region found in RelA / SpoT proteins Mg_chelatase PF01078.21 gi|568164671|ref|YP_008948245.1| - 0.054 12.9 0.0 0.1 12.0 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI NTPase_1 PF03266.15 gi|568164671|ref|YP_008948245.1| - 0.069 13.1 2.6 0.6 10.0 0.0 2.8 3 0 0 3 3 3 0 NTPase SRP54 PF00448.22 gi|568164671|ref|YP_008948245.1| - 0.069 12.8 0.0 0.11 12.1 0.0 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_5 PF07728.14 gi|568164671|ref|YP_008948245.1| - 0.079 13.0 0.2 0.51 10.3 0.0 2.3 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_23 PF13476.6 gi|568164671|ref|YP_008948245.1| - 0.085 13.4 3.7 0.1 13.1 0.1 2.1 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 gi|568164671|ref|YP_008948245.1| - 0.086 13.0 0.0 0.39 10.9 0.0 2.1 3 0 0 3 3 3 0 AAA domain AAA_14 PF13173.6 gi|568164671|ref|YP_008948245.1| - 0.13 12.3 1.0 9.3 6.3 0.1 2.8 1 1 1 3 3 3 0 AAA domain AAA_25 PF13481.6 gi|568164671|ref|YP_008948245.1| - 0.22 11.1 1.1 3.4 7.2 0.1 2.2 2 0 0 2 2 2 0 AAA domain POR_N PF01855.19 gi|568164672|ref|YP_008948246.1| - 2e-58 197.9 0.0 3.6e-58 197.0 0.0 1.4 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg POR PF01558.18 gi|568164672|ref|YP_008948246.1| - 4.6e-34 118.0 1.0 1.7e-33 116.2 0.4 2.1 2 0 0 2 2 2 1 Pyruvate ferredoxin/flavodoxin oxidoreductase PFOR_II PF17147.4 gi|568164672|ref|YP_008948246.1| - 8.6e-11 42.1 0.4 1.2e-09 38.4 0.0 2.8 3 0 0 3 3 3 1 Pyruvate:ferredoxin oxidoreductase core domain II Transketolase_C PF02780.20 gi|568164672|ref|YP_008948246.1| - 2.8e-07 30.4 0.0 7.9e-07 29.0 0.0 1.7 1 0 0 1 1 1 1 Transketolase, C-terminal domain TPP_enzyme_N PF02776.18 gi|568164672|ref|YP_008948246.1| - 0.00039 20.1 0.4 0.0026 17.4 0.4 2.2 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|568164673|ref|YP_008948247.1| - 1.9e-31 108.9 0.2 3e-31 108.3 0.2 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFO_beta_C PF12367.8 gi|568164673|ref|YP_008948247.1| - 9e-25 86.6 0.3 2e-24 85.5 0.3 1.6 1 0 0 1 1 1 1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal TBPIP PF07106.13 gi|568164674|ref|YP_008948248.1| - 0.0011 18.8 0.4 0.0016 18.3 0.4 1.2 1 0 0 1 1 1 1 TBPIP/Hop2 winged helix domain TrmB PF01978.19 gi|568164674|ref|YP_008948248.1| - 0.037 13.9 1.3 0.063 13.2 0.2 1.8 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB preATP-grasp_3 PF18301.1 gi|568164674|ref|YP_008948248.1| - 0.077 13.3 0.0 0.14 12.4 0.0 1.5 1 0 0 1 1 1 0 pre ATP-grasp 3 domain DUF2785 PF10978.8 gi|568164674|ref|YP_008948248.1| - 0.11 12.2 0.2 0.12 12.1 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2785) RmlD_sub_bind PF04321.17 gi|568164676|ref|YP_008948250.1| - 8.8e-21 74.2 0.0 1.1e-20 74.0 0.0 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain Epimerase PF01370.21 gi|568164676|ref|YP_008948250.1| - 4.3e-05 23.1 0.0 6.4e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Methyltr_RsmB-F PF01189.17 gi|568164677|ref|YP_008948252.1| - 1.4e-30 106.4 0.1 5e-30 104.6 0.1 1.9 1 1 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltransf_31 PF13847.6 gi|568164677|ref|YP_008948252.1| - 0.00028 20.7 0.0 0.00057 19.7 0.0 1.5 2 0 0 2 2 2 1 Methyltransferase domain MTS PF05175.14 gi|568164677|ref|YP_008948252.1| - 0.041 13.4 0.0 0.064 12.8 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain Ubie_methyltran PF01209.18 gi|568164677|ref|YP_008948252.1| - 0.049 13.0 0.1 0.08 12.3 0.1 1.3 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family HxlR PF01638.17 gi|568164678|ref|YP_008948253.1| - 8.2e-19 67.2 0.1 9.7e-19 67.0 0.1 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_5 PF01022.20 gi|568164678|ref|YP_008948253.1| - 4e-06 26.6 0.0 5.3e-06 26.2 0.0 1.2 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.6 gi|568164678|ref|YP_008948253.1| - 0.00056 19.8 0.2 0.00086 19.2 0.1 1.4 1 1 0 1 1 1 1 Winged helix-turn-helix RepL PF05732.11 gi|568164678|ref|YP_008948253.1| - 0.00085 18.8 0.2 0.0014 18.0 0.2 1.4 1 1 0 1 1 1 1 Firmicute plasmid replication protein (RepL) PadR PF03551.14 gi|568164678|ref|YP_008948253.1| - 0.002 18.1 0.1 0.0027 17.6 0.1 1.3 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_34 PF13601.6 gi|568164678|ref|YP_008948253.1| - 0.0029 17.8 0.1 0.0037 17.4 0.1 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_27 PF13463.6 gi|568164678|ref|YP_008948253.1| - 0.005 17.3 0.0 0.0066 16.9 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_24 PF13412.6 gi|568164678|ref|YP_008948253.1| - 0.013 15.0 0.0 0.021 14.4 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|568164678|ref|YP_008948253.1| - 0.026 14.5 0.0 0.035 14.0 0.0 1.2 1 0 0 1 1 1 0 MarR family MarR_2 PF12802.7 gi|568164678|ref|YP_008948253.1| - 0.038 13.9 0.0 0.051 13.5 0.0 1.2 1 0 0 1 1 1 0 MarR family HTH_20 PF12840.7 gi|568164678|ref|YP_008948253.1| - 0.068 13.2 0.0 0.086 12.9 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|568164678|ref|YP_008948253.1| - 0.07 13.1 0.0 0.11 12.5 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain PKD PF00801.20 gi|568164679|ref|YP_008948257.1| - 0.0088 15.9 2.7 0.81 9.6 0.4 2.3 2 0 0 2 2 2 2 PKD domain ATP1G1_PLM_MAT8 PF02038.16 gi|568164679|ref|YP_008948257.1| - 0.03 13.7 4.2 0.58 9.6 1.2 2.4 1 1 1 2 2 2 0 ATP1G1/PLM/MAT8 family TraK PF06586.11 gi|568164679|ref|YP_008948257.1| - 0.055 13.1 2.2 0.066 12.9 2.2 1.1 1 0 0 1 1 1 0 TraK protein DUF3040 PF11239.8 gi|568164679|ref|YP_008948257.1| - 0.069 13.4 2.1 0.11 12.7 2.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3040) DUF11 PF01345.18 gi|568164679|ref|YP_008948257.1| - 1.3 9.4 4.8 2.9 8.3 3.5 2.1 1 1 1 2 2 2 0 Domain of unknown function DUF11 BACON PF13004.7 gi|568164679|ref|YP_008948257.1| - 2.2 8.4 8.7 24 5.0 8.6 2.3 1 1 1 2 2 2 0 Putative binding domain, N-terminal tRNA-synt_1e PF01406.19 gi|568165015|ref|YP_008948258.1| - 0.028 13.7 0.1 0.054 12.8 0.1 1.5 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain SpoVIF PF14069.6 gi|568165015|ref|YP_008948258.1| - 0.048 13.4 0.1 0.13 12.1 0.1 1.7 1 0 0 1 1 1 0 Stage VI sporulation protein F DUF3211 PF11485.8 gi|568165015|ref|YP_008948258.1| - 0.061 13.5 3.2 0.16 12.1 0.3 2.9 2 1 0 2 2 2 0 Protein of unknown function (DUF3211) T2SSE PF00437.20 gi|568164680|ref|YP_008948259.1| - 3e-44 151.1 0.0 5.2e-44 150.4 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein ABC_tran PF00005.27 gi|568164680|ref|YP_008948259.1| - 0.00096 19.7 0.0 0.0021 18.6 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 gi|568164680|ref|YP_008948259.1| - 0.006 17.0 0.0 0.011 16.1 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain TrwB_AAD_bind PF10412.9 gi|568164680|ref|YP_008948259.1| - 0.0068 15.4 0.0 0.01 14.8 0.0 1.2 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain AAA_29 PF13555.6 gi|568164680|ref|YP_008948259.1| - 0.0084 15.8 0.4 0.021 14.5 0.1 1.8 2 0 0 2 2 2 1 P-loop containing region of AAA domain FtsK_SpoIIIE PF01580.18 gi|568164680|ref|YP_008948259.1| - 0.023 14.0 0.0 0.048 13.0 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family MMR_HSR1 PF01926.23 gi|568164680|ref|YP_008948259.1| - 0.025 14.7 0.0 0.048 13.7 0.0 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_22 PF13401.6 gi|568164680|ref|YP_008948259.1| - 0.025 14.8 0.0 0.061 13.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 gi|568164680|ref|YP_008948259.1| - 0.026 14.0 0.1 0.049 13.2 0.1 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region PCMT PF01135.19 gi|568164680|ref|YP_008948259.1| - 0.037 13.8 0.0 0.084 12.6 0.0 1.5 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RsgA_GTPase PF03193.16 gi|568164680|ref|YP_008948259.1| - 0.049 13.5 0.0 0.12 12.2 0.0 1.6 1 0 0 1 1 1 0 RsgA GTPase cobW PF02492.19 gi|568164680|ref|YP_008948259.1| - 0.061 12.9 0.1 0.098 12.2 0.1 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain Septin PF00735.18 gi|568164680|ref|YP_008948259.1| - 0.073 12.3 0.0 0.12 11.6 0.0 1.3 1 0 0 1 1 1 0 Septin DUF87 PF01935.17 gi|568164680|ref|YP_008948259.1| - 0.078 13.1 0.6 0.2 11.7 0.1 1.8 2 0 0 2 2 2 0 Helicase HerA, central domain SRP54 PF00448.22 gi|568164680|ref|YP_008948259.1| - 0.086 12.5 0.4 0.15 11.7 0.4 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain Dynamin_N PF00350.23 gi|568164680|ref|YP_008948259.1| - 0.11 12.6 0.1 0.23 11.5 0.1 1.5 1 0 0 1 1 1 0 Dynamin family AAA_23 PF13476.6 gi|568164680|ref|YP_008948259.1| - 0.14 12.6 0.3 0.28 11.6 0.3 1.4 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|568164680|ref|YP_008948259.1| - 0.14 12.7 0.0 0.37 11.3 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|568164680|ref|YP_008948259.1| - 0.22 11.8 0.0 0.37 11.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.6 gi|568164680|ref|YP_008948259.1| - 0.24 11.7 0.2 0.52 10.6 0.2 1.7 1 1 0 1 1 1 0 AAA domain T2SSF PF00482.23 gi|568164681|ref|YP_008948260.1| - 1.2e-13 51.1 4.5 2.7e-08 33.8 0.6 5.5 7 0 0 7 7 7 2 Type II secretion system (T2SS), protein F Anemone_cytotox PF06369.12 gi|568164681|ref|YP_008948260.1| - 0.04 13.5 0.0 0.093 12.3 0.0 1.5 2 0 0 2 2 2 0 Sea anemone cytotoxic protein fn3_5 PF06280.12 gi|568164682|ref|YP_008948261.1| - 0.00056 20.6 6.6 0.00083 20.0 6.6 1.2 1 0 0 1 1 1 1 Fn3-like domain DUF4307 PF14155.6 gi|568164682|ref|YP_008948261.1| - 0.0023 17.7 3.1 0.0034 17.2 2.2 1.7 1 1 1 2 2 2 1 Domain of unknown function (DUF4307) DUF11 PF01345.18 gi|568164682|ref|YP_008948261.1| - 0.18 12.1 12.9 0.31 11.4 12.1 1.9 1 1 0 1 1 1 0 Domain of unknown function DUF11 MG4 PF17789.1 gi|568164682|ref|YP_008948261.1| - 0.33 11.1 6.7 15 5.8 4.8 2.3 1 1 1 2 2 2 0 Macroglobulin domain MG4 Baculo_11_kDa PF06143.11 gi|568164682|ref|YP_008948261.1| - 0.46 10.1 1.6 0.92 9.1 1.6 1.4 1 0 0 1 1 1 0 Baculovirus 11 kDa family CARDB PF07705.11 gi|568164682|ref|YP_008948261.1| - 0.57 10.5 12.1 1.6 9.0 11.2 2.2 1 1 0 1 1 1 0 CARDB NolX PF05819.11 gi|568164682|ref|YP_008948261.1| - 1.5 8.1 2.7 1.8 7.8 2.7 1.1 1 0 0 1 1 1 0 NolX protein Glu_synthase PF01645.17 gi|568164683|ref|YP_008948262.1| - 2.1e-97 326.6 3.4 1.1e-93 314.4 1.5 2.2 2 0 0 2 2 2 2 Conserved region in glutamate synthase Glu_syn_central PF04898.14 gi|568164683|ref|YP_008948262.1| - 8.8e-17 61.5 0.1 1.8e-10 40.8 0.0 3.2 2 1 0 2 2 2 2 Glutamate synthase central domain FMN_dh PF01070.18 gi|568164683|ref|YP_008948262.1| - 4.6e-07 29.2 11.1 1.4e-05 24.3 5.8 3.2 3 0 0 3 3 3 1 FMN-dependent dehydrogenase NMO PF03060.15 gi|568164683|ref|YP_008948262.1| - 0.0019 17.6 4.1 0.0036 16.8 4.1 1.4 1 0 0 1 1 1 1 Nitronate monooxygenase IMPDH PF00478.25 gi|568164683|ref|YP_008948262.1| - 0.035 13.1 9.9 0.015 14.3 6.7 1.8 2 0 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain NanE PF04131.14 gi|568164683|ref|YP_008948262.1| - 0.04 13.1 0.3 0.087 12.0 0.3 1.5 1 0 0 1 1 1 0 Putative N-acetylmannosamine-6-phosphate epimerase DHO_dh PF01180.21 gi|568164683|ref|YP_008948262.1| - 0.14 11.3 2.6 0.32 10.2 2.6 1.6 1 1 0 1 1 1 0 Dihydroorotate dehydrogenase GXGXG PF01493.19 gi|568164684|ref|YP_008948263.1| - 4.6e-23 81.8 9.5 7.9e-23 81.0 9.5 1.3 1 0 0 1 1 1 1 GXGXG motif GATase_6 PF13522.6 gi|568164684|ref|YP_008948263.1| - 3.6e-07 30.5 0.0 7e-06 26.3 0.0 2.3 1 1 0 1 1 1 1 Glutamine amidotransferase domain GATase_2 PF00310.21 gi|568164684|ref|YP_008948263.1| - 7e-06 25.0 0.0 0.001 17.9 0.0 2.2 1 1 0 1 1 1 1 Glutamine amidotransferases class-II GATase_7 PF13537.6 gi|568164684|ref|YP_008948263.1| - 0.014 15.3 0.0 0.14 12.1 0.0 2.2 1 1 0 1 1 1 0 Glutamine amidotransferase domain DUF3091 PF11291.8 gi|568164684|ref|YP_008948263.1| - 0.11 12.7 1.5 16 5.8 0.2 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3091) CbiG_N PF11760.8 gi|568164685|ref|YP_008948264.1| - 0.0042 17.1 0.0 0.008 16.2 0.0 1.4 1 0 0 1 1 1 1 Cobalamin synthesis G N-terminal Peripla_BP_2 PF01497.18 gi|568164686|ref|YP_008948265.1| - 6.5e-13 48.8 0.0 8.7e-13 48.4 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein zf-CHCC PF10276.9 gi|568164686|ref|YP_008948265.1| - 0.13 12.4 0.0 0.23 11.5 0.0 1.3 1 0 0 1 1 1 0 Zinc-finger domain Haemagg_act PF05860.13 gi|568165016|ref|YP_008948266.1| - 0.011 15.6 3.4 0.02 14.8 3.4 1.4 1 0 0 1 1 1 0 haemagglutination activity domain PilS PF08805.11 gi|568165016|ref|YP_008948266.1| - 0.11 12.3 1.8 0.16 11.8 1.8 1.2 1 0 0 1 1 1 0 PilS N terminal HMGL-like PF00682.19 gi|568164687|ref|YP_008948267.1| - 2.4e-51 174.8 0.1 3.7e-51 174.2 0.1 1.3 1 0 0 1 1 1 1 HMGL-like LeuA_dimer PF08502.10 gi|568164687|ref|YP_008948267.1| - 1.6e-22 79.9 0.9 4.7e-21 75.1 0.1 2.6 2 0 0 2 2 2 1 LeuA allosteric (dimerisation) domain AP_endonuc_2 PF01261.24 gi|568164687|ref|YP_008948267.1| - 0.049 13.1 0.0 0.56 9.6 0.0 2.2 1 1 1 2 2 2 0 Xylose isomerase-like TIM barrel UbiA PF01040.18 gi|568164688|ref|YP_008948268.1| - 2.6e-39 135.0 19.7 3.2e-39 134.7 19.7 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family DUF2752 PF10825.8 gi|568164688|ref|YP_008948268.1| - 0.22 11.6 5.5 0.23 11.6 0.1 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2752) DUF1129 PF06570.11 gi|568164688|ref|YP_008948268.1| - 1.6 8.2 13.5 0.18 11.3 3.1 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF1129) PetG PF02529.15 gi|568164688|ref|YP_008948268.1| - 5 7.1 6.9 1.4 8.8 0.8 3.0 3 0 0 3 3 3 0 Cytochrome B6-F complex subunit 5 GGACT PF06094.12 gi|568164689|ref|YP_008948269.1| - 6.4e-30 104.2 6.3 4.9e-22 78.8 1.7 2.1 2 0 0 2 2 2 2 Gamma-glutamyl cyclotransferase, AIG2-like AIG2_2 PF13772.6 gi|568164689|ref|YP_008948269.1| - 3.4e-09 37.0 1.9 0.00011 22.6 0.0 2.2 2 0 0 2 2 2 2 AIG2-like family SF3b10 PF07189.11 gi|568164689|ref|YP_008948269.1| - 0.023 14.8 0.0 0.056 13.6 0.0 1.6 2 0 0 2 2 2 0 Splicing factor 3B subunit 10 (SF3b10) DUF2672 PF10878.8 gi|568165017|ref|YP_008948270.1| - 0.15 12.0 0.1 0.28 11.2 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2672) NfeD PF01957.18 gi|568164690|ref|YP_008948271.1| - 5.7e-16 58.7 3.1 1.5e-15 57.3 3.1 1.7 1 1 0 1 1 1 1 NfeD-like C-terminal, partner-binding FUSC-like PF12805.7 gi|568164690|ref|YP_008948271.1| - 0.037 13.1 0.4 0.044 12.9 0.4 1.1 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS DUF2190 PF09956.9 gi|568164690|ref|YP_008948271.1| - 0.13 12.8 0.0 0.15 12.5 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2190) Chordopox_A13L PF05961.11 gi|568164690|ref|YP_008948271.1| - 3.2 8.1 7.9 15 5.9 0.1 2.2 1 1 1 2 2 2 0 Chordopoxvirus A13L protein Thermopsin PF05317.11 gi|568164691|ref|YP_008948272.1| - 4e-23 82.2 8.2 4e-23 82.2 8.2 1.9 2 1 0 2 2 2 1 Thermopsin Band_7 PF01145.25 gi|568164692|ref|YP_008948273.1| - 2.5e-35 122.1 5.1 3.3e-35 121.7 5.1 1.1 1 0 0 1 1 1 1 SPFH domain / Band 7 family Band_7_1 PF13421.6 gi|568164692|ref|YP_008948273.1| - 0.0047 16.7 0.6 0.018 14.8 0.3 1.9 1 1 0 2 2 2 1 SPFH domain-Band 7 family SpoU_sub_bind PF08032.12 gi|568164692|ref|YP_008948273.1| - 0.035 14.4 0.1 0.57 10.5 0.1 2.4 2 1 0 2 2 2 0 RNA 2'-O ribose methyltransferase substrate binding LptE PF04390.12 gi|568164692|ref|YP_008948273.1| - 0.11 13.1 1.9 0.24 12.1 0.2 2.1 2 0 0 2 2 2 0 Lipopolysaccharide-assembly ThiI PF02568.14 gi|568164693|ref|YP_008948276.1| - 3.9e-45 153.9 0.0 5.9e-45 153.3 0.0 1.3 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) THUMP PF02926.17 gi|568164693|ref|YP_008948276.1| - 2.8e-15 56.7 0.8 5.5e-15 55.7 0.8 1.6 1 0 0 1 1 1 1 THUMP domain QueC PF06508.13 gi|568164693|ref|YP_008948276.1| - 2.6e-06 27.1 0.0 0.00033 20.2 0.0 2.5 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC Inos-1-P_synth PF01658.17 gi|568164694|ref|YP_008948277.1| - 4.6e-20 71.9 0.0 1.1e-19 70.7 0.0 1.6 1 0 0 1 1 1 1 Myo-inositol-1-phosphate synthase NAD_binding_5 PF07994.12 gi|568164694|ref|YP_008948277.1| - 0.00029 20.3 0.0 0.00094 18.7 0.0 1.8 2 1 0 2 2 2 1 Myo-inositol-1-phosphate synthase GFO_IDH_MocA PF01408.22 gi|568164694|ref|YP_008948277.1| - 0.051 14.4 0.1 0.69 10.7 0.1 2.3 1 1 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold Proton_antipo_M PF00361.20 gi|568164695|ref|YP_008948278.1| - 2e-42 145.4 32.4 2e-42 145.4 32.4 1.9 2 0 0 2 2 2 1 Proton-conducting membrane transporter Proton_antipo_M PF00361.20 gi|568164696|ref|YP_008948279.1| - 3.8e-74 249.5 87.7 1.6e-44 152.3 30.0 5.2 5 2 0 5 5 5 3 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|568164696|ref|YP_008948279.1| - 4.7e-08 33.0 20.0 8.7e-06 25.7 3.7 5.0 4 0 0 4 4 4 2 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Oxidored_q2 PF00420.24 gi|568164697|ref|YP_008948280.1| - 7.9e-11 41.5 8.9 9.2e-11 41.3 8.9 1.1 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L TspO_MBR PF03073.15 gi|568164697|ref|YP_008948280.1| - 0.00088 19.3 5.1 0.0012 18.9 5.1 1.2 1 0 0 1 1 1 1 TspO/MBR family DUF2627 PF11118.8 gi|568164697|ref|YP_008948280.1| - 0.44 11.2 5.2 2.7 8.6 5.2 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF2627) CoatB PF10389.9 gi|568164697|ref|YP_008948280.1| - 0.5 10.2 6.3 2 8.3 0.4 2.3 2 0 0 2 2 2 0 Bacteriophage coat protein B Oxidored_q3 PF00499.20 gi|568164698|ref|YP_008948281.1| - 8.3e-14 51.5 19.3 8.3e-14 51.5 19.3 1.4 2 0 0 2 2 2 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Fer4 PF00037.27 gi|568164699|ref|YP_008948282.1| - 8.8e-15 53.8 13.5 3.8e-09 36.0 3.7 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|568164699|ref|YP_008948282.1| - 3e-12 46.5 19.5 1.7e-08 34.5 10.4 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|568164699|ref|YP_008948282.1| - 9.4e-11 41.7 15.8 9.9e-08 32.0 9.0 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|568164699|ref|YP_008948282.1| - 3.8e-10 40.2 9.2 7e-10 39.3 9.2 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|568164699|ref|YP_008948282.1| - 5e-09 37.0 5.9 0.00048 21.0 0.2 2.5 2 1 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|568164699|ref|YP_008948282.1| - 1.2e-08 35.0 6.9 1.9e-08 34.3 6.9 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|568164699|ref|YP_008948282.1| - 2.2e-08 33.8 14.9 0.00034 20.6 3.1 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|568164699|ref|YP_008948282.1| - 8e-07 28.8 10.5 0.0041 17.1 2.9 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|568164699|ref|YP_008948282.1| - 3.1e-05 24.1 9.4 0.018 15.5 1.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|568164699|ref|YP_008948282.1| - 0.00022 22.0 16.5 0.031 15.2 4.9 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|568164699|ref|YP_008948282.1| - 0.0003 21.3 6.0 0.17 12.5 0.6 2.4 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|568164699|ref|YP_008948282.1| - 0.00063 20.1 8.4 0.031 14.7 0.8 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|568164699|ref|YP_008948282.1| - 0.0034 18.1 5.5 0.44 11.3 0.5 2.5 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|568164699|ref|YP_008948282.1| - 0.069 13.7 10.2 0.5 11.0 2.3 2.6 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_18 PF13746.6 gi|568164699|ref|YP_008948282.1| - 0.15 12.2 10.8 0.091 13.0 1.6 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|568164699|ref|YP_008948282.1| - 1.1 10.1 11.9 6.9 7.6 2.2 2.3 1 1 2 3 3 3 0 4Fe-4S dicluster domain NADHdh PF00146.21 gi|568164700|ref|YP_008948283.1| - 8.3e-77 258.4 29.2 1e-76 258.1 29.2 1.0 1 0 0 1 1 1 1 NADH dehydrogenase Complex1_49kDa PF00346.19 gi|568164701|ref|YP_008948284.1| - 1.5e-94 316.1 0.0 2.1e-94 315.7 0.0 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NiFeSe_Hases PF00374.19 gi|568164701|ref|YP_008948284.1| - 0.018 14.0 0.0 0.069 12.0 0.0 1.9 2 0 0 2 2 2 0 Nickel-dependent hydrogenase Nitrate_red_gam PF02665.14 gi|568164701|ref|YP_008948284.1| - 0.14 11.7 0.6 0.22 11.0 0.2 1.5 2 0 0 2 2 2 0 Nitrate reductase gamma subunit Complex1_30kDa PF00329.19 gi|568164702|ref|YP_008948285.1| - 3.2e-33 115.0 0.1 3.8e-33 114.7 0.1 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DUF5354 PF17305.2 gi|568164702|ref|YP_008948285.1| - 0.2 11.9 0.0 0.33 11.2 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5354) Oxidored_q4 PF00507.19 gi|568164703|ref|YP_008948286.1| - 4.4e-07 30.0 2.8 4.4e-07 30.0 2.8 1.4 1 1 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YqhR PF11085.8 gi|568164703|ref|YP_008948286.1| - 0.0053 16.7 4.6 0.0053 16.7 4.6 1.3 1 1 0 1 1 1 1 Conserved membrane protein YqhR Thy1 PF02511.15 gi|568164704|ref|YP_008948287.1| - 2.1e-61 207.0 0.8 2.6e-61 206.7 0.8 1.1 1 0 0 1 1 1 1 Thymidylate synthase complementing protein DUF2175 PF09943.9 gi|568164705|ref|YP_008948288.1| - 2.2e-34 117.7 2.3 2.5e-34 117.5 2.3 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2175) Ca_bind_SSO6904 PF18249.1 gi|568164705|ref|YP_008948288.1| - 2.2e-05 24.7 2.7 0.038 14.3 0.2 2.1 1 1 1 2 2 2 2 Calcium binding protein SSO6904 Vps39_2 PF10367.9 gi|568164705|ref|YP_008948288.1| - 0.0021 18.5 1.2 0.02 15.4 0.0 2.1 2 0 0 2 2 2 1 Vacuolar sorting protein 39 domain 2 DUF1825 PF08855.10 gi|568164705|ref|YP_008948288.1| - 0.0042 17.0 1.2 0.0065 16.4 1.2 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF1825) FliG_N PF14842.6 gi|568164705|ref|YP_008948288.1| - 0.044 14.3 1.1 0.067 13.7 1.1 1.4 1 1 0 1 1 1 0 FliG N-terminal domain DUF3231 PF11553.8 gi|568164705|ref|YP_008948288.1| - 0.053 13.2 0.3 0.07 12.8 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3231) GFA PF04828.14 gi|568164705|ref|YP_008948288.1| - 0.069 13.5 0.3 0.13 12.6 0.1 1.6 2 0 0 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme C5-epim_C PF06662.13 gi|568164706|ref|YP_008948289.1| - 0.0014 18.1 0.9 0.11 12.0 0.1 2.7 1 1 1 2 2 2 2 D-glucuronyl C5-epimerase C-terminus Thioredoxin_2 PF13098.6 gi|568164706|ref|YP_008948289.1| - 0.14 12.7 0.3 1.4 9.4 0.1 2.4 2 0 0 2 2 2 0 Thioredoxin-like domain Glyco_hydro_76 PF03663.14 gi|568164706|ref|YP_008948289.1| - 0.33 10.4 1.4 3.3 7.1 1.3 2.0 1 1 1 2 2 2 0 Glycosyl hydrolase family 76 DUF364 PF04016.12 gi|568164707|ref|YP_008948290.1| - 1.9e-29 102.2 0.0 2.6e-29 101.7 0.0 1.2 1 0 0 1 1 1 1 Putative heavy-metal chelation DUF4213 PF13938.6 gi|568164707|ref|YP_008948290.1| - 4.9e-14 52.3 0.0 8.5e-14 51.5 0.0 1.3 1 0 0 1 1 1 1 Putative heavy-metal chelation PadR PF03551.14 gi|568164708|ref|YP_008948291.1| - 4e-17 61.9 0.1 6.7e-17 61.2 0.1 1.4 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family RTP PF02334.16 gi|568164708|ref|YP_008948291.1| - 0.00024 21.7 2.0 0.0021 18.7 0.1 2.3 2 1 0 2 2 2 1 Replication terminator protein DUF1495 PF07381.11 gi|568164708|ref|YP_008948291.1| - 0.0007 19.4 0.6 0.0023 17.7 0.2 2.1 2 1 0 2 2 2 1 Winged helix DNA-binding domain (DUF1495) DUF2207 PF09972.9 gi|568164708|ref|YP_008948291.1| - 0.0036 16.1 0.4 0.004 16.0 0.4 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) DUF4364 PF14277.6 gi|568164708|ref|YP_008948291.1| - 0.0048 16.7 0.2 0.012 15.3 0.0 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF4364) TrmB PF01978.19 gi|568164708|ref|YP_008948291.1| - 0.0092 15.8 0.0 0.028 14.3 0.0 2.0 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_34 PF13601.6 gi|568164708|ref|YP_008948291.1| - 0.0098 16.1 0.1 0.025 14.7 0.1 1.7 1 1 0 1 1 1 1 Winged helix DNA-binding domain HTH_5 PF01022.20 gi|568164708|ref|YP_008948291.1| - 0.14 12.1 1.3 0.48 10.3 0.1 2.5 3 0 0 3 3 3 0 Bacterial regulatory protein, arsR family ThiP_synth PF10120.9 gi|568164709|ref|YP_008948292.1| - 3.2e-51 173.2 0.0 3.6e-51 173.1 0.0 1.0 1 0 0 1 1 1 1 Thiamine-phosphate synthase CarboxypepD_reg PF13620.6 gi|568165020|ref|YP_008948293.1| - 1.1e-08 35.2 10.1 1.1e-08 35.2 10.1 3.7 3 1 0 3 3 2 1 Carboxypeptidase regulatory-like domain Baculo_PEP_C PF04513.12 gi|568165020|ref|YP_008948293.1| - 1.7e-08 34.6 21.1 1.7e-08 34.6 21.1 2.1 2 0 0 2 2 1 1 Baculovirus polyhedron envelope protein, PEP, C terminus Big_1 PF02369.16 gi|568165020|ref|YP_008948293.1| - 8.7e-07 28.9 9.5 8.7e-07 28.9 9.5 5.0 3 2 1 4 4 2 1 Bacterial Ig-like domain (group 1) Spc7 PF08317.11 gi|568165020|ref|YP_008948293.1| - 1.6e-06 27.2 1.3 2.4e-06 26.6 1.3 1.2 1 0 0 1 1 1 1 Spc7 kinetochore protein SlyX PF04102.12 gi|568165020|ref|YP_008948293.1| - 3.6e-06 27.5 1.8 0.0028 18.2 0.2 2.4 1 1 1 2 2 2 2 SlyX XhlA PF10779.9 gi|568165020|ref|YP_008948293.1| - 4.2e-06 26.9 0.8 0.089 13.0 0.4 2.5 1 1 1 2 2 2 2 Haemolysin XhlA DUF5082 PF16888.5 gi|568165020|ref|YP_008948293.1| - 5.7e-06 26.6 13.2 0.0035 17.6 4.1 3.0 1 1 1 2 2 2 2 Domain of unknown function (DUF5082) DUF1664 PF07889.12 gi|568165020|ref|YP_008948293.1| - 6e-06 26.3 2.8 0.00015 21.8 0.4 2.4 1 1 1 2 2 2 2 Protein of unknown function (DUF1664) FlaC_arch PF05377.11 gi|568165020|ref|YP_008948293.1| - 8.7e-06 26.0 5.4 0.0024 18.2 1.0 3.0 1 1 1 2 2 2 1 Flagella accessory protein C (FlaC) ATG16 PF08614.11 gi|568165020|ref|YP_008948293.1| - 1.5e-05 25.4 3.7 2.3e-05 24.7 3.7 1.2 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) TMF_DNA_bd PF12329.8 gi|568165020|ref|YP_008948293.1| - 1.6e-05 24.8 8.5 0.019 14.9 1.5 2.3 1 1 1 2 2 2 2 TATA element modulatory factor 1 DNA binding ADIP PF11559.8 gi|568165020|ref|YP_008948293.1| - 2.2e-05 24.6 9.3 0.00052 20.1 1.3 2.2 1 1 1 2 2 2 2 Afadin- and alpha -actinin-Binding bMG3 PF11974.8 gi|568165020|ref|YP_008948293.1| - 2.6e-05 24.2 0.9 0.00017 21.6 0.4 2.4 2 0 0 2 2 1 1 Bacterial alpha-2-macroglobulin MG3 domain Lzipper-MIP1 PF14389.6 gi|568165020|ref|YP_008948293.1| - 2.7e-05 24.4 1.6 0.032 14.5 0.2 2.5 1 1 1 2 2 2 1 Leucine-zipper of ternary complex factor MIP1 MG2 PF01835.19 gi|568165020|ref|YP_008948293.1| - 4e-05 24.0 5.9 0.0016 18.8 0.3 3.6 4 0 0 4 4 2 1 MG2 domain CENP-F_leu_zip PF10473.9 gi|568165020|ref|YP_008948293.1| - 5e-05 23.4 3.8 0.00014 21.9 3.8 1.6 1 1 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 ZapB PF06005.12 gi|568165020|ref|YP_008948293.1| - 6.1e-05 23.4 5.0 0.017 15.5 1.7 2.3 1 1 0 2 2 2 1 Cell division protein ZapB FAM76 PF16046.5 gi|568165020|ref|YP_008948293.1| - 6.6e-05 22.4 1.4 9e-05 22.0 1.4 1.1 1 0 0 1 1 1 1 FAM76 protein NPV_P10 PF05531.12 gi|568165020|ref|YP_008948293.1| - 9.2e-05 22.8 13.5 0.01 16.3 1.0 2.4 1 1 1 2 2 2 2 Nucleopolyhedrovirus P10 protein DUF812 PF05667.11 gi|568165020|ref|YP_008948293.1| - 9.5e-05 21.5 0.3 0.00013 21.0 0.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF812) Prefoldin_2 PF01920.20 gi|568165020|ref|YP_008948293.1| - 9.9e-05 22.2 0.3 0.025 14.6 0.3 2.3 1 1 0 1 1 1 1 Prefoldin subunit KASH_CCD PF14662.6 gi|568165020|ref|YP_008948293.1| - 0.00011 22.1 2.9 0.0002 21.3 2.9 1.3 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH EzrA PF06160.12 gi|568165020|ref|YP_008948293.1| - 0.00016 20.0 2.0 0.00016 20.0 2.0 1.4 2 0 0 2 2 1 1 Septation ring formation regulator, EzrA HOOK PF05622.12 gi|568165020|ref|YP_008948293.1| - 0.00017 19.9 1.0 0.00023 19.5 1.0 1.1 1 0 0 1 1 1 1 HOOK protein DUF4988 PF16378.5 gi|568165020|ref|YP_008948293.1| - 0.00018 21.2 5.9 0.46 10.1 0.1 3.6 1 1 2 3 3 3 1 Domain of unknown function CLZ PF16526.5 gi|568165020|ref|YP_008948293.1| - 0.00019 21.7 1.8 0.29 11.5 0.4 2.4 1 1 1 2 2 2 1 C-terminal leucine zipper domain of cyclic nucleotide-gated channels BLOC1_2 PF10046.9 gi|568165020|ref|YP_008948293.1| - 0.0002 21.6 8.1 0.24 11.7 2.8 2.5 1 1 0 2 2 2 2 Biogenesis of lysosome-related organelles complex-1 subunit 2 Invasin_D3 PF09134.10 gi|568165020|ref|YP_008948293.1| - 0.00022 21.5 11.4 0.00022 21.5 11.4 4.4 4 1 0 4 4 3 1 Invasin, domain 3 AAA_13 PF13166.6 gi|568165020|ref|YP_008948293.1| - 0.00022 20.0 1.7 0.00031 19.5 1.7 1.1 1 0 0 1 1 1 1 AAA domain EMP24_GP25L PF01105.24 gi|568165020|ref|YP_008948293.1| - 0.00028 20.9 9.0 0.11 12.4 2.7 3.9 1 1 2 3 3 3 1 emp24/gp25L/p24 family/GOLD CarbopepD_reg_2 PF13715.6 gi|568165020|ref|YP_008948293.1| - 0.00029 20.8 5.4 0.00029 20.8 5.4 3.5 2 2 1 3 3 2 1 CarboxypepD_reg-like domain DUF3450 PF11932.8 gi|568165020|ref|YP_008948293.1| - 0.00036 19.9 7.3 0.0027 17.1 5.7 2.1 1 1 1 2 2 2 1 Protein of unknown function (DUF3450) Prefoldin PF02996.17 gi|568165020|ref|YP_008948293.1| - 0.00045 20.1 4.3 0.14 12.1 0.4 3.1 1 1 2 3 3 3 2 Prefoldin subunit FapA PF03961.13 gi|568165020|ref|YP_008948293.1| - 0.00048 18.9 0.8 0.00074 18.2 0.8 1.2 1 0 0 1 1 1 1 Flagellar Assembly Protein A Nup54 PF13874.6 gi|568165020|ref|YP_008948293.1| - 0.00049 20.2 5.3 0.00086 19.4 5.3 1.3 1 0 0 1 1 1 1 Nucleoporin complex subunit 54 IFT57 PF10498.9 gi|568165020|ref|YP_008948293.1| - 0.00054 19.0 3.7 0.00081 18.5 3.7 1.2 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 APG6_N PF17675.1 gi|568165020|ref|YP_008948293.1| - 0.00056 20.4 0.2 0.0014 19.1 0.2 1.6 1 1 0 1 1 1 1 Apg6 coiled-coil region TolA_bind_tri PF16331.5 gi|568165020|ref|YP_008948293.1| - 0.00056 19.9 6.5 0.02 15.0 1.4 2.7 1 1 1 2 2 2 2 TolA binding protein trimerisation HAUS-augmin3 PF14932.6 gi|568165020|ref|YP_008948293.1| - 0.0006 19.5 5.9 0.00089 18.9 5.9 1.2 1 0 0 1 1 1 1 HAUS augmin-like complex subunit 3 Gp58 PF07902.11 gi|568165020|ref|YP_008948293.1| - 0.00066 18.1 11.2 0.001 17.5 11.2 1.3 1 0 0 1 1 1 1 gp58-like protein Filament PF00038.21 gi|568165020|ref|YP_008948293.1| - 0.001 18.8 1.3 0.0017 18.0 1.3 1.3 1 0 0 1 1 1 1 Intermediate filament protein Snapin_Pallidin PF14712.6 gi|568165020|ref|YP_008948293.1| - 0.0011 19.3 2.6 0.0011 19.3 2.6 2.1 1 1 1 2 2 2 1 Snapin/Pallidin DUF2730 PF10805.8 gi|568165020|ref|YP_008948293.1| - 0.0012 18.9 3.8 0.031 14.3 0.4 2.8 1 1 2 3 3 2 2 Protein of unknown function (DUF2730) Atg14 PF10186.9 gi|568165020|ref|YP_008948293.1| - 0.0013 17.9 6.6 0.0044 16.2 6.6 1.8 1 1 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 DUF4795 PF16043.5 gi|568165020|ref|YP_008948293.1| - 0.0015 18.2 4.6 0.084 12.5 4.5 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF4795) TMF_TATA_bd PF12325.8 gi|568165020|ref|YP_008948293.1| - 0.0016 18.6 3.2 0.013 15.7 3.2 2.1 1 1 0 1 1 1 1 TATA element modulatory factor 1 TATA binding Cast PF10174.9 gi|568165020|ref|YP_008948293.1| - 0.0017 16.7 2.2 0.0023 16.3 2.2 1.1 1 0 0 1 1 1 1 RIM-binding protein of the cytomatrix active zone Golgin_A5 PF09787.9 gi|568165020|ref|YP_008948293.1| - 0.0017 17.9 6.4 0.0025 17.3 6.4 1.1 1 0 0 1 1 1 1 Golgin subfamily A member 5 Fib_alpha PF08702.10 gi|568165020|ref|YP_008948293.1| - 0.0024 18.1 10.8 0.048 13.8 6.8 2.3 1 1 1 2 2 2 1 Fibrinogen alpha/beta chain family GAS PF13851.6 gi|568165020|ref|YP_008948293.1| - 0.0024 17.2 0.9 0.004 16.5 0.9 1.2 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding SpaA PF17802.1 gi|568165020|ref|YP_008948293.1| - 0.0025 18.1 0.6 0.0025 18.1 0.6 2.4 2 0 0 2 2 1 1 Prealbumin-like fold domain TMPIT PF07851.13 gi|568165020|ref|YP_008948293.1| - 0.0032 16.8 0.3 0.0068 15.7 0.3 1.5 1 0 0 1 1 1 1 TMPIT-like protein DivIC PF04977.15 gi|568165020|ref|YP_008948293.1| - 0.0035 17.1 4.8 0.6 9.9 0.3 3.3 1 1 2 3 3 3 1 Septum formation initiator UPF0242 PF06785.11 gi|568165020|ref|YP_008948293.1| - 0.0036 17.5 0.4 0.0059 16.7 0.4 1.3 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus ABC_tran_CTD PF16326.5 gi|568165020|ref|YP_008948293.1| - 0.0036 17.5 0.0 0.39 11.0 0.0 2.3 1 1 2 3 3 3 2 ABC transporter C-terminal domain BRE1 PF08647.11 gi|568165020|ref|YP_008948293.1| - 0.0038 17.3 3.2 0.0085 16.1 2.1 1.9 1 1 0 1 1 1 1 BRE1 E3 ubiquitin ligase DHR10 PF18595.1 gi|568165020|ref|YP_008948293.1| - 0.0043 17.1 0.8 0.0097 16.0 0.4 1.7 1 1 1 2 2 2 2 Designed helical repeat protein 10 domain FliJ PF02050.16 gi|568165020|ref|YP_008948293.1| - 0.0045 17.2 2.7 0.047 13.9 0.1 2.2 1 1 1 2 2 2 1 Flagellar FliJ protein HlyD_2 PF12700.7 gi|568165020|ref|YP_008948293.1| - 0.0045 15.8 0.7 0.0067 15.2 0.7 1.2 1 0 0 1 1 1 1 HlyD family secretion protein Lebercilin PF15619.6 gi|568165020|ref|YP_008948293.1| - 0.0047 16.6 0.9 0.0087 15.7 0.9 1.3 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease Exonuc_VII_L PF02601.15 gi|568165020|ref|YP_008948293.1| - 0.0047 16.5 2.7 0.0074 15.9 2.7 1.2 1 0 0 1 1 1 1 Exonuclease VII, large subunit Uso1_p115_C PF04871.13 gi|568165020|ref|YP_008948293.1| - 0.0048 17.3 1.9 0.0099 16.2 1.9 1.5 1 0 0 1 1 1 1 Uso1 / p115 like vesicle tethering protein, C terminal region Seryl_tRNA_N PF02403.22 gi|568165020|ref|YP_008948293.1| - 0.0048 17.1 2.4 0.0089 16.3 2.4 1.4 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain Rab5-bind PF09311.11 gi|568165020|ref|YP_008948293.1| - 0.005 16.3 0.9 0.0073 15.7 0.9 1.2 1 0 0 1 1 1 1 Rabaptin-like protein DUF16 PF01519.16 gi|568165020|ref|YP_008948293.1| - 0.005 17.3 3.4 0.052 14.0 1.3 2.2 1 1 1 2 2 2 1 Protein of unknown function DUF16 FPP PF05911.11 gi|568165020|ref|YP_008948293.1| - 0.0053 15.0 6.4 0.0071 14.6 6.4 1.1 1 0 0 1 1 1 1 Filament-like plant protein, long coiled-coil Spc24 PF08286.11 gi|568165020|ref|YP_008948293.1| - 0.006 16.8 8.5 1.2 9.4 2.7 3.0 1 1 2 3 3 3 0 Spc24 subunit of Ndc80 DUF4164 PF13747.6 gi|568165020|ref|YP_008948293.1| - 0.0063 16.8 0.1 0.011 16.0 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4164) TPR_MLP1_2 PF07926.12 gi|568165020|ref|YP_008948293.1| - 0.0065 16.5 5.2 0.024 14.7 5.2 1.8 1 1 0 1 1 1 1 TPR/MLP1/MLP2-like protein PspA_IM30 PF04012.12 gi|568165020|ref|YP_008948293.1| - 0.0074 15.9 1.0 0.13 11.8 1.0 2.0 1 1 0 1 1 1 1 PspA/IM30 family HAP1_N PF04849.13 gi|568165020|ref|YP_008948293.1| - 0.009 15.2 1.6 0.015 14.6 1.6 1.3 1 0 0 1 1 1 1 HAP1 N-terminal conserved region Laminin_II PF06009.12 gi|568165020|ref|YP_008948293.1| - 0.0094 16.0 9.5 0.025 14.6 9.4 1.7 1 1 0 1 1 1 1 Laminin Domain II TRAF_BIRC3_bd PF16673.5 gi|568165020|ref|YP_008948293.1| - 0.0096 15.7 0.0 0.16 11.8 0.0 2.5 1 1 2 3 3 2 1 TNF receptor-associated factor BIRC3 binding domain YtkA PF13115.6 gi|568165020|ref|YP_008948293.1| - 0.011 16.3 0.5 1.5 9.5 0.0 2.9 2 1 0 2 2 2 0 YtkA-like DUF2205 PF10224.9 gi|568165020|ref|YP_008948293.1| - 0.011 15.7 3.3 0.058 13.4 0.7 2.6 1 1 2 3 3 3 0 Short coiled-coil protein HemX PF04375.14 gi|568165020|ref|YP_008948293.1| - 0.013 14.8 10.8 0.63 9.3 10.8 2.2 1 1 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase DUF724 PF05266.14 gi|568165020|ref|YP_008948293.1| - 0.014 15.3 1.0 0.02 14.7 1.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Filo_VP35 PF02097.15 gi|568165020|ref|YP_008948293.1| - 0.014 14.5 2.5 0.048 12.7 2.0 1.9 1 1 1 2 2 2 0 Filoviridae VP35 Bacillus_HBL PF05791.11 gi|568165020|ref|YP_008948293.1| - 0.014 15.2 13.8 0.056 13.3 7.4 2.3 1 1 0 2 2 2 0 Bacillus haemolytic enterotoxin (HBL) DegS PF05384.11 gi|568165020|ref|YP_008948293.1| - 0.018 14.5 0.3 0.029 13.9 0.3 1.3 1 0 0 1 1 1 0 Sensor protein DegS DUF4618 PF15397.6 gi|568165020|ref|YP_008948293.1| - 0.018 14.4 3.5 2.5 7.5 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4618) DUF4201 PF13870.6 gi|568165020|ref|YP_008948293.1| - 0.019 14.7 0.4 0.051 13.3 0.3 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4201) DUF3584 PF12128.8 gi|568165020|ref|YP_008948293.1| - 0.019 12.5 2.4 0.025 12.1 2.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) HMMR_N PF15905.5 gi|568165020|ref|YP_008948293.1| - 0.019 14.4 2.8 0.067 12.7 2.6 1.5 1 1 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal Phage_GP20 PF06810.11 gi|568165020|ref|YP_008948293.1| - 0.019 14.7 1.1 0.31 10.8 0.4 2.1 1 1 1 2 2 2 0 Phage minor structural protein GP20 Tropomyosin_1 PF12718.7 gi|568165020|ref|YP_008948293.1| - 0.02 15.1 1.4 0.72 10.0 1.4 2.1 1 1 0 1 1 1 0 Tropomyosin like CALCOCO1 PF07888.11 gi|568165020|ref|YP_008948293.1| - 0.021 13.7 0.3 0.03 13.2 0.3 1.1 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like Csm1_N PF18504.1 gi|568165020|ref|YP_008948293.1| - 0.021 15.1 4.8 1.6 9.1 1.6 3.1 1 1 1 2 2 2 0 Csm1 N-terminal domain DivIVA PF05103.13 gi|568165020|ref|YP_008948293.1| - 0.022 14.9 2.0 0.12 12.4 0.5 2.2 1 1 1 2 2 2 0 DivIVA protein Tektin PF03148.14 gi|568165020|ref|YP_008948293.1| - 0.022 13.5 4.5 0.12 11.1 1.4 2.0 1 1 1 2 2 2 0 Tektin family DUF4472 PF14739.6 gi|568165020|ref|YP_008948293.1| - 0.024 15.4 1.0 0.078 13.7 0.5 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4472) Vps51 PF08700.11 gi|568165020|ref|YP_008948293.1| - 0.024 14.7 8.6 2.3 8.3 2.3 3.5 1 1 2 3 3 3 0 Vps51/Vps67 MG4 PF17789.1 gi|568165020|ref|YP_008948293.1| - 0.026 14.6 0.7 0.026 14.6 0.7 3.8 2 2 2 4 4 2 0 Macroglobulin domain MG4 Myosin_tail_1 PF01576.19 gi|568165020|ref|YP_008948293.1| - 0.027 12.3 0.9 0.036 11.9 0.9 1.0 1 0 0 1 1 1 0 Myosin tail Med9 PF07544.13 gi|568165020|ref|YP_008948293.1| - 0.028 14.5 1.8 2.4 8.3 0.3 2.2 1 1 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 DUF4198 PF10670.9 gi|568165020|ref|YP_008948293.1| - 0.028 14.8 0.5 0.29 11.5 0.0 2.4 3 0 0 3 3 2 0 Domain of unknown function (DUF4198) COG5 PF10392.9 gi|568165020|ref|YP_008948293.1| - 0.028 14.6 12.8 0.11 12.7 12.7 1.9 1 1 0 1 1 1 0 Golgi transport complex subunit 5 GIT_CC PF16559.5 gi|568165020|ref|YP_008948293.1| - 0.029 14.2 16.6 0.26 11.2 1.3 3.6 1 1 2 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor V-SNARE PF05008.15 gi|568165020|ref|YP_008948293.1| - 0.033 14.6 1.9 0.064 13.6 1.9 1.6 1 0 0 1 1 1 0 Vesicle transport v-SNARE protein N-terminus WEMBL PF05701.11 gi|568165020|ref|YP_008948293.1| - 0.034 12.9 1.5 0.045 12.5 1.5 1.1 1 0 0 1 1 1 0 Weak chloroplast movement under blue light KxDL PF10241.9 gi|568165020|ref|YP_008948293.1| - 0.034 14.4 4.2 0.042 14.1 2.4 2.1 1 1 0 1 1 1 0 Uncharacterized conserved protein Macoilin PF09726.9 gi|568165020|ref|YP_008948293.1| - 0.035 12.7 3.1 0.05 12.2 3.1 1.2 1 0 0 1 1 1 0 Macoilin family Jnk-SapK_ap_N PF09744.9 gi|568165020|ref|YP_008948293.1| - 0.037 14.3 2.6 1.3 9.2 2.6 2.2 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 Laminin_I PF06008.14 gi|568165020|ref|YP_008948293.1| - 0.038 13.7 8.8 0.11 12.1 8.8 1.6 1 1 0 1 1 1 0 Laminin Domain I DUF713 PF05218.14 gi|568165020|ref|YP_008948293.1| - 0.038 13.7 0.5 0.15 11.8 0.5 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF713) DUF4763 PF15960.5 gi|568165020|ref|YP_008948293.1| - 0.045 13.0 5.2 0.27 10.5 5.2 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF4763) BST2 PF16716.5 gi|568165020|ref|YP_008948293.1| - 0.045 14.3 3.9 0.079 13.5 2.9 1.9 1 1 1 2 2 2 0 Bone marrow stromal antigen 2 Ax_dynein_light PF10211.9 gi|568165020|ref|YP_008948293.1| - 0.046 13.7 0.9 0.33 10.9 0.4 2.0 1 1 1 2 2 2 0 Axonemal dynein light chain Fmp27_WPPW PF10359.9 gi|568165020|ref|YP_008948293.1| - 0.047 12.5 3.2 0.11 11.3 1.8 1.9 1 1 1 2 2 2 0 RNA pol II promoter Fmp27 protein domain DUF4407 PF14362.6 gi|568165020|ref|YP_008948293.1| - 0.049 13.0 5.9 0.17 11.2 1.6 2.5 1 1 1 2 2 1 0 Domain of unknown function (DUF4407) DUF4686 PF15742.5 gi|568165020|ref|YP_008948293.1| - 0.053 12.6 4.6 0.073 12.2 4.6 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4686) MscS_porin PF12795.7 gi|568165020|ref|YP_008948293.1| - 0.053 13.1 21.8 0.24 10.9 9.8 2.2 1 1 1 2 2 2 0 Mechanosensitive ion channel porin domain bZIP_1 PF00170.21 gi|568165020|ref|YP_008948293.1| - 0.06 13.4 2.9 2.2 8.4 0.4 2.5 1 1 1 2 2 2 0 bZIP transcription factor CENP-Q PF13094.6 gi|568165020|ref|YP_008948293.1| - 0.068 13.4 2.6 0.69 10.1 2.5 2.1 1 1 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit Apolipoprotein PF01442.18 gi|568165020|ref|YP_008948293.1| - 0.072 13.0 0.9 0.65 9.8 0.8 1.9 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain Glyco_hydro2_C5 PF18565.1 gi|568165020|ref|YP_008948293.1| - 0.074 12.9 1.9 2.1 8.2 0.8 3.2 3 0 0 3 3 2 0 Glycoside hydrolase family 2 C-terminal domain 5 YabA PF06156.13 gi|568165020|ref|YP_008948293.1| - 0.079 13.6 2.1 1.9 9.1 0.4 2.4 1 1 1 2 2 2 0 Initiation control protein YabA RasGAP_C PF03836.15 gi|568165020|ref|YP_008948293.1| - 0.079 13.1 7.0 1.8 8.7 7.0 2.2 1 1 0 1 1 1 0 RasGAP C-terminus WXG100 PF06013.12 gi|568165020|ref|YP_008948293.1| - 0.081 13.2 4.9 2.1 8.7 0.3 3.2 1 1 2 3 3 3 0 Proteins of 100 residues with WXG Fez1 PF06818.15 gi|568165020|ref|YP_008948293.1| - 0.083 13.3 0.5 0.14 12.5 0.5 1.4 1 0 0 1 1 1 0 Fez1 LPP PF04728.13 gi|568165020|ref|YP_008948293.1| - 0.085 13.3 18.3 1.8 9.0 2.8 4.0 1 1 4 5 5 5 0 Lipoprotein leucine-zipper SF-assemblin PF06705.11 gi|568165020|ref|YP_008948293.1| - 0.094 12.0 3.9 0.17 11.2 3.9 1.4 1 0 0 1 1 1 0 SF-assemblin/beta giardin DUF2968 PF11180.8 gi|568165020|ref|YP_008948293.1| - 0.11 12.2 2.4 11 5.6 0.4 2.3 1 1 0 1 1 1 0 Protein of unknown function (DUF2968) Helo_like_N PF17111.5 gi|568165020|ref|YP_008948293.1| - 0.11 11.8 6.6 0.43 9.9 2.3 2.2 1 1 1 2 2 2 0 Fungal N-terminal domain of STAND proteins Swi5 PF07061.11 gi|568165020|ref|YP_008948293.1| - 0.13 12.4 2.5 9.5 6.4 1.2 2.8 1 1 1 2 2 2 0 Swi5 COG2 PF06148.11 gi|568165020|ref|YP_008948293.1| - 0.14 12.3 7.2 1.9 8.6 3.9 2.2 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 CREPT PF16566.5 gi|568165020|ref|YP_008948293.1| - 0.14 12.3 2.1 0.29 11.3 2.1 1.5 1 0 0 1 1 1 0 Cell-cycle alteration and expression-elevated protein in tumour PI3K_P85_iSH2 PF16454.5 gi|568165020|ref|YP_008948293.1| - 0.14 11.7 2.6 0.89 9.1 1.6 2.0 1 1 1 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Uds1 PF15456.6 gi|568165020|ref|YP_008948293.1| - 0.14 12.3 2.3 0.27 11.4 2.3 1.4 1 0 0 1 1 1 0 Up-regulated During Septation LXG PF04740.12 gi|568165020|ref|YP_008948293.1| - 0.15 11.8 8.2 0.3 10.8 4.1 2.1 1 1 1 2 2 2 0 LXG domain of WXG superfamily Dynamitin PF04912.14 gi|568165020|ref|YP_008948293.1| - 0.16 11.3 8.6 0.5 9.6 8.6 1.6 1 1 0 1 1 1 0 Dynamitin DUF4349 PF14257.6 gi|568165020|ref|YP_008948293.1| - 0.16 11.4 11.5 0.02 14.4 3.3 3.2 2 1 0 2 2 1 0 Domain of unknown function (DUF4349) JIP_LZII PF16471.5 gi|568165020|ref|YP_008948293.1| - 0.16 12.1 1.2 6.7 7.0 0.7 2.3 1 1 0 2 2 2 0 JNK-interacting protein leucine zipper II SKA1 PF07160.12 gi|568165020|ref|YP_008948293.1| - 0.16 11.8 5.3 1.2 8.9 2.5 2.0 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 1 Mod_r PF07200.13 gi|568165020|ref|YP_008948293.1| - 0.17 12.0 8.0 0.27 11.3 8.0 1.3 1 0 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein MAD PF05557.13 gi|568165020|ref|YP_008948293.1| - 0.17 10.2 3.6 0.9 7.8 0.2 1.5 1 1 0 1 1 1 0 Mitotic checkpoint protein FmiP_Thoc5 PF09766.9 gi|568165020|ref|YP_008948293.1| - 0.17 11.1 11.3 0.37 10.0 7.6 2.6 2 1 0 2 2 1 0 Fms-interacting protein/Thoc5 DUF4200 PF13863.6 gi|568165020|ref|YP_008948293.1| - 0.19 12.1 0.1 9.3 6.7 0.0 2.2 1 1 0 2 2 2 0 Domain of unknown function (DUF4200) Vps5 PF09325.10 gi|568165020|ref|YP_008948293.1| - 0.2 11.2 2.6 0.34 10.4 2.6 1.4 1 0 0 1 1 1 0 Vps5 C terminal like SKA2 PF16740.5 gi|568165020|ref|YP_008948293.1| - 0.2 11.5 2.9 0.87 9.4 2.2 2.2 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 2 Cluap1 PF10234.9 gi|568165020|ref|YP_008948293.1| - 0.2 11.0 4.3 1.1 8.7 4.3 1.7 1 1 0 1 1 1 0 Clusterin-associated protein-1 Snf7 PF03357.21 gi|568165020|ref|YP_008948293.1| - 0.21 11.2 1.5 0.38 10.3 1.5 1.4 1 0 0 1 1 1 0 Snf7 DUF4140 PF13600.6 gi|568165020|ref|YP_008948293.1| - 0.21 12.0 4.9 2.9 8.4 0.3 3.6 3 1 1 4 4 2 0 N-terminal domain of unknown function (DUF4140) Syntaxin-6_N PF09177.11 gi|568165020|ref|YP_008948293.1| - 0.23 12.1 4.7 1.3 9.6 4.7 2.1 1 1 0 1 1 1 0 Syntaxin 6, N-terminal DUF948 PF06103.11 gi|568165020|ref|YP_008948293.1| - 0.28 11.5 0.2 0.28 11.5 0.2 3.7 2 1 1 3 3 2 0 Bacterial protein of unknown function (DUF948) CENP-H PF05837.12 gi|568165020|ref|YP_008948293.1| - 0.29 11.5 6.7 1.9 8.9 6.6 2.1 1 1 0 1 1 1 0 Centromere protein H (CENP-H) Herpes_UL6 PF01763.16 gi|568165020|ref|YP_008948293.1| - 0.3 9.6 6.9 0.44 9.0 6.9 1.2 1 0 0 1 1 1 0 Herpesvirus UL6 like Cnn_1N PF07989.11 gi|568165020|ref|YP_008948293.1| - 0.31 11.2 1.3 1.5 9.0 0.5 2.0 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 Fzo_mitofusin PF04799.13 gi|568165020|ref|YP_008948293.1| - 0.34 10.5 6.8 0.69 9.4 5.1 2.2 1 1 1 2 2 2 0 fzo-like conserved region TSC22 PF01166.18 gi|568165020|ref|YP_008948293.1| - 0.36 11.2 2.3 2.8 8.3 0.7 2.7 1 1 0 2 2 2 0 TSC-22/dip/bun family Sec2p PF06428.11 gi|568165020|ref|YP_008948293.1| - 0.46 10.5 5.0 5.1 7.1 1.4 2.3 1 1 1 2 2 2 0 GDP/GTP exchange factor Sec2p CdvA PF18822.1 gi|568165020|ref|YP_008948293.1| - 0.47 10.3 2.3 14 5.5 0.8 2.7 1 1 1 2 2 2 0 CdvA-like coiled-coil domain CENP-K PF11802.8 gi|568165020|ref|YP_008948293.1| - 0.49 9.9 2.8 0.72 9.4 2.8 1.1 1 0 0 1 1 1 0 Centromere-associated protein K AIP3 PF03915.13 gi|568165020|ref|YP_008948293.1| - 0.52 9.4 3.5 0.78 8.8 3.5 1.2 1 0 0 1 1 1 0 Actin interacting protein 3 Vps52 PF04129.12 gi|568165020|ref|YP_008948293.1| - 0.56 8.9 7.3 0.88 8.2 7.3 1.4 1 0 0 1 1 1 0 Vps52 / Sac2 family MbeD_MobD PF04899.12 gi|568165020|ref|YP_008948293.1| - 0.7 10.0 10.3 5.4 7.2 0.6 3.2 1 1 2 3 3 3 0 MbeD/MobD like CCDC144C PF14915.6 gi|568165020|ref|YP_008948293.1| - 0.7 8.9 9.0 24 3.9 9.0 2.1 1 1 0 1 1 1 0 CCDC144C protein coiled-coil region CK2S PF15011.6 gi|568165020|ref|YP_008948293.1| - 0.72 9.7 6.8 6.1 6.7 0.3 2.5 1 1 1 2 2 2 0 Casein Kinase 2 substrate APG17 PF04108.12 gi|568165020|ref|YP_008948293.1| - 0.74 8.9 6.7 1.2 8.1 6.7 1.3 1 0 0 1 1 1 0 Autophagy protein Apg17 GCN5L1 PF06320.13 gi|568165020|ref|YP_008948293.1| - 0.77 9.9 2.9 1.9 8.6 1.6 1.9 1 1 1 2 2 2 0 GCN5-like protein 1 (GCN5L1) Sec34 PF04136.15 gi|568165020|ref|YP_008948293.1| - 0.78 9.6 10.4 2.4 8.0 6.3 2.2 1 1 1 2 2 2 0 Sec34-like family TBK1_CCD1 PF18394.1 gi|568165020|ref|YP_008948293.1| - 0.89 9.1 6.3 3.2 7.3 6.3 1.7 1 1 0 1 1 1 0 TANK-binding kinase 1 coiled-coil domain 1 Cortex-I_coil PF09304.10 gi|568165020|ref|YP_008948293.1| - 0.93 9.7 4.3 1.3 9.2 3.7 1.5 1 1 0 1 1 1 0 Cortexillin I, coiled coil MtrB PF05440.12 gi|568165020|ref|YP_008948293.1| - 0.95 9.9 5.3 4 7.9 0.2 2.8 1 1 1 2 2 2 0 Tetrahydromethanopterin S-methyltransferase subunit B Noelin-1 PF12308.8 gi|568165020|ref|YP_008948293.1| - 1.1 9.3 3.9 1.8 8.6 2.0 2.2 1 1 1 2 2 1 0 Neurogenesis glycoprotein TRPM_tetra PF16519.5 gi|568165020|ref|YP_008948293.1| - 1.2 9.3 3.7 6.6 6.9 1.0 2.4 2 0 0 2 2 2 0 Tetramerisation domain of TRPM HIP1_clath_bdg PF16515.5 gi|568165020|ref|YP_008948293.1| - 1.2 9.7 6.8 1.1 9.9 5.0 1.9 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Nop14 PF04147.12 gi|568165020|ref|YP_008948293.1| - 1.3 7.1 4.1 1.7 6.7 4.1 1.0 1 0 0 1 1 1 0 Nop14-like family DASH_Dam1 PF08653.10 gi|568165020|ref|YP_008948293.1| - 1.6 8.6 11.5 2.6 7.9 2.9 3.3 1 1 2 3 3 3 0 DASH complex subunit Dam1 HR1 PF02185.16 gi|568165020|ref|YP_008948293.1| - 1.8 8.8 11.0 9.7 6.4 0.8 2.7 1 1 1 2 2 2 0 Hr1 repeat DUF4094 PF13334.6 gi|568165020|ref|YP_008948293.1| - 2.1 8.8 8.9 22 5.6 5.1 3.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4094) Syntaxin_2 PF14523.6 gi|568165020|ref|YP_008948293.1| - 2.2 8.7 15.7 22 5.5 15.7 2.2 1 1 0 1 1 1 0 Syntaxin-like protein Spidroin_MaSp PF11260.8 gi|568165020|ref|YP_008948293.1| - 2.5 8.5 25.5 0.66 10.3 6.3 3.5 1 1 1 2 2 1 0 Major ampullate spidroin 1 and 2 Cep57_CLD_2 PF14197.6 gi|568165020|ref|YP_008948293.1| - 2.9 8.1 6.2 38 4.5 6.0 2.5 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 Lectin_N PF03954.14 gi|568165020|ref|YP_008948293.1| - 2.9 7.7 14.3 11 5.8 11.9 2.4 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain Matrilin_ccoil PF10393.9 gi|568165020|ref|YP_008948293.1| - 2.9 7.8 5.1 9.8 6.1 2.2 3.0 2 1 0 2 2 2 0 Trimeric coiled-coil oligomerisation domain of matrilin MIP-T3_C PF17749.1 gi|568165020|ref|YP_008948293.1| - 3.1 7.7 5.6 17 5.4 2.4 2.2 1 1 1 2 2 2 0 Microtubule-binding protein MIP-T3 C-terminal region DASH_Dad2 PF08654.10 gi|568165020|ref|YP_008948293.1| - 3.9 7.9 7.4 29 5.2 2.3 2.8 1 1 1 2 2 2 0 DASH complex subunit Dad2 PI_PP_I PF18363.1 gi|568165020|ref|YP_008948293.1| - 4.6 7.5 5.4 6.1 7.1 2.7 2.1 1 1 1 2 2 2 0 Phosphoinositide phosphatase insertion domain CorA PF01544.18 gi|568165020|ref|YP_008948293.1| - 4.7 6.4 9.3 1.9 7.8 6.0 2.0 1 1 1 2 2 1 0 CorA-like Mg2+ transporter protein TBCC_N PF16752.5 gi|568165020|ref|YP_008948293.1| - 5.5 7.5 7.4 13 6.3 1.3 2.2 1 1 1 2 2 2 0 Tubulin-specific chaperone C N-terminal domain End3 PF12761.7 gi|568165020|ref|YP_008948293.1| - 5.5 7.1 6.8 3.2 7.9 2.4 2.1 1 1 1 2 2 2 0 Actin cytoskeleton-regulatory complex protein END3 AATF-Che1 PF13339.6 gi|568165020|ref|YP_008948293.1| - 7.8 7.2 8.0 29 5.3 8.0 1.9 1 1 0 1 1 1 0 Apoptosis antagonizing transcription factor RIFIN PF02009.16 gi|568165022|ref|YP_008948295.1| - 0.049 13.5 4.9 0.072 13.0 4.9 1.3 1 0 0 1 1 1 0 Rifin DUF5060 PF16586.5 gi|568165022|ref|YP_008948295.1| - 0.094 13.1 0.0 0.27 11.6 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF5060) Filamin PF00630.19 gi|568165022|ref|YP_008948295.1| - 0.32 11.8 4.3 0.44 11.4 2.1 2.6 2 1 0 2 2 2 0 Filamin/ABP280 repeat TcfC PF16967.5 gi|568165022|ref|YP_008948295.1| - 0.84 9.2 5.9 1.5 8.4 0.4 3.2 3 0 0 3 3 3 0 E-set like domain TMEM154 PF15102.6 gi|568165022|ref|YP_008948295.1| - 1.5 8.8 18.8 0.017 15.0 9.9 2.3 3 0 0 3 3 3 0 TMEM154 protein family PaREP1 PF05942.11 gi|568164710|ref|YP_008948296.1| - 5.8e-29 100.3 2.9 6.7e-29 100.2 2.9 1.0 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family GT-D PF08759.11 gi|568164710|ref|YP_008948296.1| - 0.026 14.2 0.1 0.032 13.9 0.1 1.4 1 1 0 1 1 1 0 Glycosyltransferase GT-D fold HTH_3 PF01381.22 gi|568164711|ref|YP_008948297.1| - 6e-09 35.8 0.0 1.4e-08 34.7 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|568164711|ref|YP_008948297.1| - 8.5e-06 25.7 0.0 1.7e-05 24.8 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|568164711|ref|YP_008948297.1| - 7.1e-05 23.1 0.0 0.00011 22.4 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain GP3_package PF16677.5 gi|568164711|ref|YP_008948297.1| - 0.14 12.3 0.0 0.29 11.3 0.0 1.5 1 0 0 1 1 1 0 DNA-packaging protein gp3 NAC PF01849.18 gi|568164712|ref|YP_008948298.1| - 2.4e-09 37.0 0.6 2.4e-09 37.0 0.6 2.2 3 0 0 3 3 3 1 NAC domain HOIP-UBA PF16678.5 gi|568164712|ref|YP_008948298.1| - 0.0079 16.2 0.6 0.012 15.6 0.6 1.3 1 0 0 1 1 1 1 HOIP UBA domain pair UBA_4 PF14555.6 gi|568164712|ref|YP_008948298.1| - 0.04 13.8 0.0 0.066 13.0 0.0 1.3 1 0 0 1 1 1 0 UBA-like domain Pannexin_like PF12534.8 gi|568164712|ref|YP_008948298.1| - 0.061 12.4 0.6 0.064 12.3 0.6 1.1 1 0 0 1 1 1 0 Pannexin-like TM region of LRRC8 CUE PF02845.16 gi|568164712|ref|YP_008948298.1| - 0.062 13.0 0.0 0.17 11.7 0.0 1.8 1 1 1 2 2 2 0 CUE domain PvlArgDC PF01862.16 gi|568164712|ref|YP_008948298.1| - 0.12 12.1 1.4 0.19 11.5 1.4 1.4 1 1 0 1 1 1 0 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) Beta-Casp PF10996.8 gi|568164713|ref|YP_008948299.1| - 1.9e-15 57.1 0.0 6.2e-15 55.5 0.0 1.8 2 0 0 2 2 2 1 Beta-Casp domain RMMBL PF07521.12 gi|568164713|ref|YP_008948299.1| - 1.2e-14 54.0 0.1 2.1e-14 53.2 0.1 1.4 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_6 PF16661.5 gi|568164713|ref|YP_008948299.1| - 2e-09 37.1 0.0 5e-08 32.6 0.0 2.3 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|568164713|ref|YP_008948299.1| - 9.5e-09 35.0 0.0 2e-08 34.0 0.0 1.5 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|568164713|ref|YP_008948299.1| - 3.4e-06 27.2 0.0 0.0034 17.4 0.0 2.4 2 0 0 2 2 2 2 Metallo-beta-lactamase superfamily PDEase_II PF02112.15 gi|568164713|ref|YP_008948299.1| - 0.0002 20.6 0.0 0.00039 19.6 0.0 1.4 1 0 0 1 1 1 1 cAMP phosphodiesterases class-II Lactamase_B_3 PF13483.6 gi|568164713|ref|YP_008948299.1| - 0.0029 17.5 0.0 0.0055 16.6 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain tRNA-Thr_ED PF08915.11 gi|568164714|ref|YP_008948300.1| - 1.3e-49 167.8 0.2 2.1e-49 167.1 0.2 1.4 1 0 0 1 1 1 1 Archaea-specific editing domain of threonyl-tRNA synthetase HGTP_anticodon PF03129.20 gi|568164714|ref|YP_008948300.1| - 8.5e-16 57.9 0.2 2.8e-15 56.2 0.2 1.9 1 0 0 1 1 1 1 Anticodon binding domain Hydrolase PF00702.26 gi|568164714|ref|YP_008948300.1| - 0.024 14.9 0.1 0.043 14.1 0.1 1.4 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase Amidinotransf PF02274.17 gi|568164714|ref|YP_008948300.1| - 0.088 11.9 0.0 0.13 11.3 0.0 1.2 1 0 0 1 1 1 0 Amidinotransferase DUF1107 PF06526.12 gi|568164714|ref|YP_008948300.1| - 0.11 12.4 0.1 0.57 10.1 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1107) CRISPR_Cas2 PF09827.9 gi|568164714|ref|YP_008948300.1| - 0.11 12.6 0.0 1.5 9.0 0.0 2.6 2 0 0 2 2 2 0 CRISPR associated protein Cas2 SIS PF01380.22 gi|568164715|ref|YP_008948301.1| - 1.7e-46 157.3 1.1 1.7e-24 86.1 0.1 2.5 2 0 0 2 2 2 2 SIS domain GATase_6 PF13522.6 gi|568164715|ref|YP_008948301.1| - 1.1e-20 74.1 0.0 2.6e-20 73.0 0.0 1.6 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 gi|568164715|ref|YP_008948301.1| - 1.4e-17 63.8 0.0 3.3e-17 62.5 0.0 1.7 1 0 0 1 1 1 1 Glutamine amidotransferase domain SIS_2 PF13580.6 gi|568164715|ref|YP_008948301.1| - 2.5e-06 27.5 0.1 0.0016 18.5 0.0 3.2 2 1 1 3 3 3 1 SIS domain GATase_4 PF13230.6 gi|568164715|ref|YP_008948301.1| - 0.0033 16.4 0.0 0.005 15.8 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferases class-II GHMP_kinases_C PF08544.13 gi|568164716|ref|YP_008948302.1| - 5.4e-11 42.7 0.1 2e-10 40.9 0.1 2.0 2 0 0 2 2 2 1 GHMP kinases C terminal GHMP_kinases_N PF00288.26 gi|568164716|ref|YP_008948302.1| - 4.9e-09 36.3 1.2 6.6e-09 35.9 0.1 1.8 2 0 0 2 2 2 1 GHMP kinases N terminal domain DUF2666 PF10869.8 gi|568164716|ref|YP_008948302.1| - 0.24 11.6 3.8 3.7 7.8 0.4 2.8 2 2 1 3 3 3 0 Protein of unknown function (DUF2666) NTP_transferase PF00483.23 gi|568164717|ref|YP_008948303.1| - 3.8e-16 59.4 0.3 7e-15 55.3 0.1 2.1 1 1 1 2 2 2 1 Nucleotidyl transferase Hexapep PF00132.24 gi|568164717|ref|YP_008948303.1| - 6.1e-13 47.9 8.8 1.2e-06 28.0 2.1 4.8 2 1 3 5 5 5 4 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 gi|568164717|ref|YP_008948303.1| - 2.8e-12 47.3 0.0 4e-12 46.8 0.0 1.3 1 1 0 1 1 1 1 MobA-like NTP transferase domain Glycos_transf_2 PF00535.26 gi|568164717|ref|YP_008948303.1| - 0.0033 17.3 0.0 0.0049 16.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Fucokinase PF07959.12 gi|568164717|ref|YP_008948303.1| - 0.0035 16.3 2.8 0.016 14.2 1.0 2.2 1 1 1 2 2 2 1 L-fucokinase Hexapep_2 PF14602.6 gi|568164717|ref|YP_008948303.1| - 0.0071 16.1 5.7 4.6 7.1 0.2 3.8 2 1 1 3 3 3 2 Hexapeptide repeat of succinyl-transferase CofC PF01983.16 gi|568164717|ref|YP_008948303.1| - 0.038 13.2 2.5 0.083 12.1 0.3 2.1 2 0 0 2 2 2 0 Guanylyl transferase CofC like T6PP_N PF18572.1 gi|568165023|ref|YP_008948305.1| - 0.1 12.5 0.9 0.27 11.1 0.8 1.9 1 1 0 1 1 1 0 Trehalose-6-phosphate phosphatase N-terminal helical bundle domain Semialdhyde_dh PF01118.24 gi|568164719|ref|YP_008948306.1| - 1.6e-30 106.0 0.0 1.5e-29 102.8 0.0 2.4 2 1 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.18 gi|568164719|ref|YP_008948306.1| - 2.9e-23 82.9 0.0 4.2e-23 82.4 0.0 1.2 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Gp_dh_C PF02800.20 gi|568164719|ref|YP_008948306.1| - 0.049 13.2 0.1 0.33 10.5 0.1 2.3 2 0 0 2 2 2 0 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Methyltransf_25 PF13649.6 gi|568164720|ref|YP_008948307.1| - 4.1e-18 65.9 0.0 8.1e-18 64.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|568164720|ref|YP_008948307.1| - 6.8e-15 55.5 0.0 3.4e-14 53.3 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|568164720|ref|YP_008948307.1| - 1.4e-12 47.7 0.0 1.9e-12 47.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|568164720|ref|YP_008948307.1| - 1.3e-11 44.7 0.0 1.8e-11 44.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|568164720|ref|YP_008948307.1| - 5.8e-10 39.8 0.0 1.1e-09 39.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|568164720|ref|YP_008948307.1| - 4.4e-09 36.0 0.0 7.2e-09 35.3 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family TehB PF03848.14 gi|568164720|ref|YP_008948307.1| - 2.1e-06 27.3 0.1 3.2e-06 26.7 0.1 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB CheR PF01739.18 gi|568164720|ref|YP_008948307.1| - 2.1e-05 24.1 0.3 0.0092 15.5 0.1 2.4 1 1 1 2 2 2 2 CheR methyltransferase, SAM binding domain N6_N4_Mtase PF01555.18 gi|568164720|ref|YP_008948307.1| - 0.00012 21.9 0.0 0.11 12.2 0.0 2.3 2 0 0 2 2 2 2 DNA methylase MTS PF05175.14 gi|568164720|ref|YP_008948307.1| - 0.00012 21.6 0.0 0.00021 20.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain NodS PF05401.11 gi|568164720|ref|YP_008948307.1| - 0.00025 20.7 0.0 0.00038 20.1 0.0 1.3 1 0 0 1 1 1 1 Nodulation protein S (NodS) CMAS PF02353.20 gi|568164720|ref|YP_008948307.1| - 0.00099 18.5 0.0 0.0015 17.9 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase N2227 PF07942.12 gi|568164720|ref|YP_008948307.1| - 0.0022 17.2 0.1 0.07 12.3 0.0 2.5 1 1 1 2 2 2 1 N2227-like protein Methyltransf_32 PF13679.6 gi|568164720|ref|YP_008948307.1| - 0.0027 17.7 0.0 0.004 17.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_PK PF05891.12 gi|568164720|ref|YP_008948307.1| - 0.0062 16.1 0.1 0.0092 15.5 0.1 1.2 1 0 0 1 1 1 1 AdoMet dependent proline di-methyltransferase MethyltransfD12 PF02086.15 gi|568164720|ref|YP_008948307.1| - 0.012 15.3 0.1 0.019 14.7 0.1 1.3 1 0 0 1 1 1 0 D12 class N6 adenine-specific DNA methyltransferase DUF268 PF03269.14 gi|568164720|ref|YP_008948307.1| - 0.032 14.1 0.0 0.7 9.7 0.0 2.3 2 0 0 2 2 2 0 Caenorhabditis protein of unknown function, DUF268 TrkA_N PF02254.18 gi|568164720|ref|YP_008948307.1| - 0.043 14.1 0.0 0.12 12.6 0.0 1.7 2 0 0 2 2 2 0 TrkA-N domain OCD_Mu_crystall PF02423.15 gi|568164721|ref|YP_008948308.1| - 2.3e-43 148.3 0.2 2.9e-43 148.0 0.2 1.1 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family Shikimate_DH PF01488.20 gi|568164721|ref|YP_008948308.1| - 1.7e-05 24.9 0.0 3.3e-05 24.0 0.0 1.6 1 1 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase 2-Hacid_dh_C PF02826.19 gi|568164721|ref|YP_008948308.1| - 0.0014 18.1 0.0 0.0026 17.1 0.0 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Ssl1 PF04056.14 gi|568164721|ref|YP_008948308.1| - 0.14 11.9 0.0 0.23 11.2 0.0 1.3 1 0 0 1 1 1 0 Ssl1-like Cob_adeno_trans PF01923.18 gi|568164722|ref|YP_008948309.1| - 3.6e-46 157.3 0.0 4.1e-46 157.1 0.0 1.0 1 0 0 1 1 1 1 Cobalamin adenosyltransferase DUF1351 PF07083.11 gi|568164722|ref|YP_008948309.1| - 0.086 12.6 0.7 0.13 12.0 0.7 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1351) Peptidase_S8 PF00082.22 gi|568164723|ref|YP_008948310.1| - 5.4e-06 25.9 0.9 9.4e-06 25.1 0.2 1.7 2 0 0 2 2 2 1 Subtilase family Iso_dh PF00180.20 gi|568164724|ref|YP_008948311.1| - 1.1e-104 350.4 0.1 1.3e-104 350.1 0.1 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase P22_Tail-4 PF11650.8 gi|568164724|ref|YP_008948311.1| - 0.06 13.3 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 P22 tail accessory factor Dodecin PF07311.12 gi|568164724|ref|YP_008948311.1| - 0.4 11.0 0.1 0.4 11.0 0.1 2.2 3 0 0 3 3 3 0 Dodecin # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Crenarchaeota/Sulfolobus_acidocaldarius_SUSAZ_uid232254/NC_023069.faa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Crenarchaeota/Sulfolobus_acidocaldarius_SUSAZ_uid232254/NC_023069.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Crenarchaeota/Sulfolobus_acidocaldarius_SUSAZ_uid232254/NC_023069.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Crenarchaeota/Sulfolobus_acidocaldarius_SUSAZ_uid232254/NC_023069.faa # Current dir: /oak/stanford/groups/akundaje/marinovg/genomes # Date: Mon Mar 25 11:25:07 2019 # [ok]