#                                                                           --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
# target name        accession  query name                       accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target
#------------------- ----------             -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------
Cdc6_C	PF09079.6	gi|449066048|ref|YP_007433130.1|	-	5e-16	58.1	0.0	1.1e-15	57.1	0.0	1.6	1	0	0	1	1	1	1	CDC6,	C	terminal
AAA_22	PF13401.1	gi|449066048|ref|YP_007433130.1|	-	3e-11	43.5	0.1	1.1e-09	38.4	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
AAA	PF00004.24	gi|449066048|ref|YP_007433130.1|	-	1.1e-05	25.6	0.0	3.7e-05	23.9	0.0	1.9	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
NB-ARC	PF00931.17	gi|449066048|ref|YP_007433130.1|	-	0.00037	19.4	0.0	0.0011	17.8	0.0	1.6	1	1	1	2	2	2	1	NB-ARC	domain
DUF2075	PF09848.4	gi|449066048|ref|YP_007433130.1|	-	0.0018	17.3	0.0	0.0028	16.7	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
Sigma54_activat	PF00158.21	gi|449066048|ref|YP_007433130.1|	-	0.011	15.1	0.0	0.036	13.5	0.0	1.9	2	0	0	2	2	2	0	Sigma-54	interaction	domain
AAA_16	PF13191.1	gi|449066048|ref|YP_007433130.1|	-	0.044	13.7	0.0	0.095	12.6	0.0	1.6	1	0	0	1	1	1	0	AAA	ATPase	domain
PhoH	PF02562.11	gi|449066048|ref|YP_007433130.1|	-	0.048	12.8	0.0	0.11	11.6	0.0	1.6	1	0	0	1	1	1	0	PhoH-like	protein
DNA_pol3_delta2	PF13177.1	gi|449066048|ref|YP_007433130.1|	-	0.054	13.1	0.3	4.3	6.9	0.0	2.3	2	0	0	2	2	2	0	DNA	polymerase	III,	delta	subunit
IstB_IS21	PF01695.12	gi|449066048|ref|YP_007433130.1|	-	0.073	12.4	0.0	2.3	7.5	0.0	2.2	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
KNOX1	PF03790.8	gi|449066048|ref|YP_007433130.1|	-	0.086	12.1	0.0	0.35	10.2	0.0	2.0	1	0	0	1	1	1	0	KNOX1	domain
MerR-DNA-bind	PF09278.6	gi|449066049|ref|YP_007433131.1|	-	0.031	14.6	0.9	0.2	12.0	0.1	2.2	2	1	0	2	2	2	0	MerR,	DNA	binding
Plasmodium_Vir	PF05795.6	gi|449066049|ref|YP_007433131.1|	-	0.049	12.8	3.7	0.068	12.3	1.9	1.6	1	1	1	2	2	2	0	Plasmodium	vivax	Vir	protein
NPV_P10	PF05531.7	gi|449066049|ref|YP_007433131.1|	-	0.066	13.4	1.5	0.77	10.0	0.2	2.1	2	0	0	2	2	2	0	Nucleopolyhedrovirus	P10	protein
E2R135	PF11570.3	gi|449066049|ref|YP_007433131.1|	-	0.085	12.9	0.0	0.12	12.5	0.0	1.2	1	0	0	1	1	1	0	Coiled-coil	receptor-binding	R-domain	of	colicin	E2
Lipoprotein_7	PF01540.11	gi|449066049|ref|YP_007433131.1|	-	0.32	10.0	5.4	14	4.6	3.7	2.0	1	1	0	1	1	1	0	Adhesin	lipoprotein
TM_helix	PF05552.7	gi|449066050|ref|YP_007433132.1|	-	1.4e-14	53.4	11.9	3.7e-11	42.5	1.6	4.2	5	0	0	5	5	5	2	Conserved	TM	helix
NDUF_B12	PF08122.7	gi|449066050|ref|YP_007433132.1|	-	0.031	14.0	0.3	1.7	8.4	0.0	2.8	2	0	0	2	2	2	0	NADH-ubiquinone	oxidoreductase	B12	subunit	family
HTH_5	PF01022.15	gi|449066053|ref|YP_007433135.1|	-	2.1e-13	49.6	0.0	3.1e-13	49.1	0.0	1.2	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|449066053|ref|YP_007433135.1|	-	5.1e-11	42.2	0.0	6.9e-11	41.7	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|449066053|ref|YP_007433135.1|	-	2.8e-09	36.5	0.3	4e-09	36.0	0.2	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|449066053|ref|YP_007433135.1|	-	8e-07	28.3	0.0	1.6e-06	27.4	0.0	1.5	1	1	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|449066053|ref|YP_007433135.1|	-	3.2e-05	23.4	0.1	4.6e-05	22.9	0.0	1.2	1	0	0	1	1	1	1	HTH	domain
HTH_45	PF14947.1	gi|449066053|ref|YP_007433135.1|	-	9.2e-05	22.1	0.3	0.00012	21.8	0.2	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix
Penicillinase_R	PF03965.11	gi|449066053|ref|YP_007433135.1|	-	0.00043	20.3	0.2	0.00065	19.7	0.1	1.3	1	1	0	1	1	1	1	Penicillinase	repressor
HTH_IclR	PF09339.5	gi|449066053|ref|YP_007433135.1|	-	0.00051	19.5	0.0	0.00071	19.1	0.0	1.2	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_12	PF08461.5	gi|449066053|ref|YP_007433135.1|	-	0.00091	18.9	0.1	0.0014	18.3	0.1	1.4	1	0	0	1	1	1	1	Ribonuclease	R	winged-helix	domain
DUF4423	PF14394.1	gi|449066053|ref|YP_007433135.1|	-	0.0017	17.8	0.0	0.0017	17.8	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
MarR_2	PF12802.2	gi|449066053|ref|YP_007433135.1|	-	0.0024	17.4	0.0	0.0032	17.1	0.0	1.1	1	0	0	1	1	1	1	MarR	family
Phage_rep_org_N	PF09681.5	gi|449066053|ref|YP_007433135.1|	-	0.0034	16.9	0.0	0.0037	16.8	0.0	1.2	1	0	0	1	1	1	1	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
HTH_34	PF13601.1	gi|449066053|ref|YP_007433135.1|	-	0.0041	17.1	0.1	0.0052	16.7	0.1	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
DUF2513	PF10711.4	gi|449066053|ref|YP_007433135.1|	-	0.0045	17.0	0.0	0.0053	16.8	0.0	1.1	1	0	0	1	1	1	1	Hypothetical	protein	(DUF2513)
TFIIE_alpha	PF02002.12	gi|449066053|ref|YP_007433135.1|	-	0.0061	16.0	0.1	0.0062	16.0	0.1	1.1	1	0	0	1	1	1	1	TFIIE	alpha	subunit
Sigma70_r4_2	PF08281.7	gi|449066053|ref|YP_007433135.1|	-	0.023	14.1	0.1	0.12	11.8	0.1	2.0	1	1	0	1	1	1	0	Sigma-70,	region	4
HTH_28	PF13518.1	gi|449066053|ref|YP_007433135.1|	-	0.023	14.7	0.0	0.03	14.3	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_29	PF13551.1	gi|449066053|ref|YP_007433135.1|	-	0.023	14.8	0.0	0.029	14.5	0.0	1.1	1	0	0	1	1	1	0	Winged	helix-turn	helix
DUF2089	PF09862.4	gi|449066053|ref|YP_007433135.1|	-	0.028	14.2	0.1	0.057	13.2	0.1	1.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2089)
Fe_dep_repress	PF01325.14	gi|449066053|ref|YP_007433135.1|	-	0.035	14.0	0.1	0.046	13.6	0.1	1.2	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
PadR	PF03551.9	gi|449066053|ref|YP_007433135.1|	-	0.039	13.7	0.2	0.093	12.5	0.1	1.6	1	1	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
HTH_27	PF13463.1	gi|449066053|ref|YP_007433135.1|	-	0.039	14.2	0.0	0.05	13.9	0.0	1.1	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_10	PF04967.7	gi|449066053|ref|YP_007433135.1|	-	0.047	13.2	0.0	0.079	12.5	0.0	1.4	1	1	0	1	1	1	0	HTH	DNA	binding	domain
MarR	PF01047.17	gi|449066053|ref|YP_007433135.1|	-	0.049	13.3	0.0	0.064	12.9	0.0	1.2	1	0	0	1	1	1	0	MarR	family
HTH_23	PF13384.1	gi|449066053|ref|YP_007433135.1|	-	0.05	13.2	0.0	0.068	12.8	0.0	1.2	1	0	0	1	1	1	0	Homeodomain-like	domain
Rrf2	PF02082.15	gi|449066053|ref|YP_007433135.1|	-	0.069	13.2	0.0	0.092	12.8	0.0	1.2	1	0	0	1	1	1	0	Transcriptional	regulator
FaeA	PF04703.7	gi|449066053|ref|YP_007433135.1|	-	0.12	12.5	0.1	0.15	12.2	0.1	1.2	1	0	0	1	1	1	0	FaeA-like	protein
CN_hydrolase	PF00795.17	gi|449066055|ref|YP_007433137.1|	-	1.2e-11	44.3	0.0	1.6e-11	43.9	0.0	1.2	1	0	0	1	1	1	1	Carbon-nitrogen	hydrolase
NAD_synthase	PF02540.12	gi|449066056|ref|YP_007433138.1|	-	8.4e-76	254.0	0.0	9.7e-76	253.8	0.0	1.0	1	0	0	1	1	1	1	NAD	synthase
tRNA_Me_trans	PF03054.11	gi|449066056|ref|YP_007433138.1|	-	6.9e-05	21.5	0.0	0.0024	16.4	0.0	2.1	2	0	0	2	2	2	1	tRNA	methyl	transferase
ThiI	PF02568.9	gi|449066056|ref|YP_007433138.1|	-	0.0011	18.4	0.0	0.0016	17.8	0.0	1.2	1	0	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
Asn_synthase	PF00733.16	gi|449066056|ref|YP_007433138.1|	-	0.0027	17.2	0.0	0.0027	17.2	0.0	1.2	1	0	0	1	1	1	1	Asparagine	synthase
Sigma70_r4	PF04545.11	gi|449066056|ref|YP_007433138.1|	-	0.021	14.0	0.3	0.078	12.3	0.1	2.0	3	0	0	3	3	3	0	Sigma-70,	region	4
QueC	PF06508.8	gi|449066056|ref|YP_007433138.1|	-	0.07	12.3	0.0	0.23	10.7	0.0	1.9	2	0	0	2	2	2	0	Queuosine	biosynthesis	protein	QueC
NTPase_1	PF03266.10	gi|449066058|ref|YP_007433140.1|	-	4.5e-49	166.3	0.0	5.2e-49	166.1	0.0	1.0	1	0	0	1	1	1	1	NTPase
Pox_A32	PF04665.7	gi|449066058|ref|YP_007433140.1|	-	2.1e-06	27.2	0.2	0.0037	16.6	0.0	2.1	2	0	0	2	2	2	2	Poxvirus	A32	protein
MobB	PF03205.9	gi|449066058|ref|YP_007433140.1|	-	3.9e-05	23.3	0.1	0.0018	17.9	0.0	2.3	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA	PF00004.24	gi|449066058|ref|YP_007433140.1|	-	0.00015	21.9	0.0	0.00026	21.1	0.0	1.5	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_24	PF13479.1	gi|449066058|ref|YP_007433140.1|	-	0.0011	18.5	0.1	0.0053	16.3	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|449066058|ref|YP_007433140.1|	-	0.0012	18.9	0.1	0.0046	17.0	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
CbiA	PF01656.18	gi|449066058|ref|YP_007433140.1|	-	0.0013	18.2	0.0	0.0019	17.6	0.0	1.4	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_18	PF13238.1	gi|449066058|ref|YP_007433140.1|	-	0.0015	18.8	0.1	0.0022	18.3	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
NACHT	PF05729.7	gi|449066058|ref|YP_007433140.1|	-	0.0015	18.1	0.1	0.0039	16.8	0.1	1.8	1	1	0	1	1	1	1	NACHT	domain
AAA_14	PF13173.1	gi|449066058|ref|YP_007433140.1|	-	0.0022	17.9	0.6	0.031	14.1	0.4	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|449066058|ref|YP_007433140.1|	-	0.0034	17.4	0.0	0.0056	16.6	0.0	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
DUF2608	PF11019.3	gi|449066058|ref|YP_007433140.1|	-	0.0036	16.3	0.0	0.0048	15.9	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2608)
Arch_ATPase	PF01637.13	gi|449066058|ref|YP_007433140.1|	-	0.011	15.4	0.2	0.017	14.8	0.1	1.4	1	1	0	1	1	1	0	Archaeal	ATPase
DUF2478	PF10649.4	gi|449066058|ref|YP_007433140.1|	-	0.013	14.8	0.0	0.056	12.7	0.0	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2478)
ABC_tran	PF00005.22	gi|449066058|ref|YP_007433140.1|	-	0.019	15.2	0.1	0.039	14.2	0.0	1.6	2	0	0	2	2	1	0	ABC	transporter
RNA_helicase	PF00910.17	gi|449066058|ref|YP_007433140.1|	-	0.021	15.0	0.0	0.076	13.1	0.0	1.9	2	0	0	2	2	2	0	RNA	helicase
AAA_17	PF13207.1	gi|449066058|ref|YP_007433140.1|	-	0.021	15.6	1.0	0.039	14.7	0.7	1.8	1	1	0	1	1	1	0	AAA	domain
AAA_28	PF13521.1	gi|449066058|ref|YP_007433140.1|	-	0.024	14.5	0.0	0.043	13.7	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
cobW	PF02492.14	gi|449066058|ref|YP_007433140.1|	-	0.025	14.0	0.1	0.04	13.3	0.1	1.7	1	1	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
APS_kinase	PF01583.15	gi|449066058|ref|YP_007433140.1|	-	0.026	14.2	0.0	0.039	13.5	0.0	1.3	1	0	0	1	1	1	0	Adenylylsulphate	kinase
DAP3	PF10236.4	gi|449066058|ref|YP_007433140.1|	-	0.03	13.2	0.0	0.088	11.7	0.0	1.7	2	0	0	2	2	2	0	Mitochondrial	ribosomal	death-associated	protein	3
NB-ARC	PF00931.17	gi|449066058|ref|YP_007433140.1|	-	0.042	12.7	0.0	0.065	12.0	0.0	1.3	1	0	0	1	1	1	0	NB-ARC	domain
AAA_25	PF13481.1	gi|449066058|ref|YP_007433140.1|	-	0.14	11.5	0.0	0.33	10.3	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
Chlor_dismutase	PF06778.7	gi|449066059|ref|YP_007433141.1|	-	9.4e-53	178.8	0.4	1.6e-52	178.0	0.0	1.5	1	1	1	2	2	2	1	Chlorite	dismutase
Aldedh	PF00171.17	gi|449066059|ref|YP_007433141.1|	-	0.21	9.9	0.1	2.1	6.5	0.1	1.9	2	0	0	2	2	2	0	Aldehyde	dehydrogenase	family
NUDIX	PF00293.23	gi|449066060|ref|YP_007433142.1|	-	1.4e-18	66.8	0.0	1.8e-18	66.5	0.0	1.1	1	0	0	1	1	1	1	NUDIX	domain
SNARE_assoc	PF09335.6	gi|449066061|ref|YP_007433143.1|	-	1.3e-06	28.5	2.4	1.3e-06	28.5	1.7	2.0	1	1	1	2	2	2	1	SNARE	associated	Golgi	protein
SieB	PF14163.1	gi|449066061|ref|YP_007433143.1|	-	2	7.9	7.3	0.12	11.9	0.3	2.1	2	1	0	2	2	2	0	Superinfection	exclusion	protein	B
AP_endonuc_2	PF01261.19	gi|449066062|ref|YP_007433144.1|	-	4.9e-24	84.8	0.0	6.2e-24	84.4	0.0	1.1	1	0	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
HMGL-like	PF00682.14	gi|449066062|ref|YP_007433144.1|	-	0.00011	21.9	0.1	0.00021	21.0	0.0	1.4	1	1	0	1	1	1	1	HMGL-like
UvdE	PF03851.9	gi|449066062|ref|YP_007433144.1|	-	0.00015	20.9	0.0	0.00022	20.3	0.0	1.3	1	0	0	1	1	1	1	UV-endonuclease	UvdE
DeoC	PF01791.4	gi|449066062|ref|YP_007433144.1|	-	0.0045	16.3	0.3	0.007	15.6	0.2	1.4	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
DUF3973	PF13119.1	gi|449066062|ref|YP_007433144.1|	-	0.049	13.5	0.5	0.12	12.2	0.3	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3973)
Hydrolase_3	PF08282.7	gi|449066063|ref|YP_007433145.1|	-	1.8e-26	93.2	0.2	5.2e-17	62.2	0.0	2.0	1	1	1	2	2	2	2	haloacid	dehalogenase-like	hydrolase
S6PP	PF05116.8	gi|449066063|ref|YP_007433145.1|	-	1.1e-09	38.0	0.0	1.7e-06	27.5	0.0	2.2	2	0	0	2	2	2	2	Sucrose-6F-phosphate	phosphohydrolase
Trehalose_PPase	PF02358.11	gi|449066063|ref|YP_007433145.1|	-	1.3e-06	27.5	0.0	0.018	13.9	0.0	2.3	2	1	0	2	2	2	2	Trehalose-phosphatase
HAD	PF12710.2	gi|449066063|ref|YP_007433145.1|	-	0.0011	19.2	0.1	0.0033	17.6	0.1	1.9	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
DUF934	PF06073.7	gi|449066063|ref|YP_007433145.1|	-	0.074	12.7	0.0	0.15	11.7	0.0	1.5	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF934)
Hydrolase	PF00702.21	gi|449066063|ref|YP_007433145.1|	-	0.12	12.7	0.0	0.33	11.3	0.0	1.5	1	1	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
Methyltransf_31	PF13847.1	gi|449066064|ref|YP_007433146.1|	-	0.0049	16.4	0.0	0.0054	16.3	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|449066064|ref|YP_007433146.1|	-	0.017	14.7	0.0	0.02	14.4	0.0	1.3	1	0	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
MTS	PF05175.9	gi|449066064|ref|YP_007433146.1|	-	0.044	13.1	0.0	0.056	12.8	0.0	1.3	1	1	0	1	1	1	0	Methyltransferase	small	domain
HAD_2	PF13419.1	gi|449066065|ref|YP_007433147.1|	-	3.2e-18	66.5	0.0	3.9e-18	66.2	0.0	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|449066065|ref|YP_007433147.1|	-	2.2e-08	33.6	0.0	8.4e-08	31.8	0.0	1.8	2	0	0	2	2	2	1	HAD-hyrolase-like
Hydrolase	PF00702.21	gi|449066065|ref|YP_007433147.1|	-	2e-06	28.4	0.0	1.2e-05	25.8	0.0	1.9	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_6	PF13344.1	gi|449066065|ref|YP_007433147.1|	-	0.094	12.6	0.0	0.3	10.9	0.0	1.9	2	0	0	2	2	2	0	Haloacid	dehalogenase-like	hydrolase
Cut8_C	PF08559.5	gi|449066065|ref|YP_007433147.1|	-	0.13	12.0	0.0	0.2	11.5	0.0	1.4	1	0	0	1	1	1	0	Cut8	six-helix	bundle
HypA	PF01155.14	gi|449066066|ref|YP_007433148.1|	-	0.00099	18.7	1.1	0.0014	18.2	0.7	1.3	1	1	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
PhnA_Zn_Ribbon	PF08274.7	gi|449066066|ref|YP_007433148.1|	-	0.0086	15.8	3.9	0.4	10.5	1.4	2.2	2	0	0	2	2	2	1	PhnA	Zinc-Ribbon
DUF1451	PF07295.6	gi|449066066|ref|YP_007433148.1|	-	0.0092	15.7	1.5	0.019	14.7	1.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1451)
Sigma70_r4	PF04545.11	gi|449066066|ref|YP_007433148.1|	-	0.0092	15.2	0.1	0.014	14.7	0.0	1.2	1	0	0	1	1	1	1	Sigma-70,	region	4
z-alpha	PF02295.12	gi|449066066|ref|YP_007433148.1|	-	0.014	15.1	0.8	0.029	14.1	0.5	1.6	1	1	0	1	1	1	0	Adenosine	deaminase	z-alpha	domain
UPF0547	PF10571.4	gi|449066066|ref|YP_007433148.1|	-	0.014	15.1	5.8	0.079	12.6	0.1	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
IBR	PF01485.16	gi|449066066|ref|YP_007433148.1|	-	0.014	15.2	1.2	0.018	14.8	0.8	1.2	1	0	0	1	1	1	0	IBR	domain
DZR	PF12773.2	gi|449066066|ref|YP_007433148.1|	-	0.014	15.1	1.2	0.024	14.4	0.8	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
zf-C2HC5	PF06221.8	gi|449066066|ref|YP_007433148.1|	-	0.021	14.5	0.7	0.034	13.9	0.5	1.3	1	0	0	1	1	1	0	Putative	zinc	finger	motif,	C2HC5-type
ADK_lid	PF05191.9	gi|449066066|ref|YP_007433148.1|	-	0.024	14.2	3.7	0.054	13.1	2.6	1.6	1	0	0	1	1	1	0	Adenylate	kinase,	active	site	lid
TF_Zn_Ribbon	PF08271.7	gi|449066066|ref|YP_007433148.1|	-	0.038	13.3	4.5	0.6	9.4	0.7	2.3	2	0	0	2	2	2	0	TFIIB	zinc-binding
NRDD	PF13597.1	gi|449066066|ref|YP_007433148.1|	-	0.057	11.5	0.1	0.06	11.4	0.1	1.1	1	0	0	1	1	1	0	Anaerobic	ribonucleoside-triphosphate	reductase
RNA_POL_M_15KD	PF02150.11	gi|449066066|ref|YP_007433148.1|	-	0.058	13.0	2.2	0.32	10.7	0.0	2.3	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
Zn-ribbon_8	PF09723.5	gi|449066066|ref|YP_007433148.1|	-	0.071	13.0	4.7	0.23	11.4	3.3	1.9	1	1	0	1	1	1	0	Zinc	ribbon	domain
HTH_5	PF01022.15	gi|449066066|ref|YP_007433148.1|	-	0.098	12.3	0.1	0.17	11.5	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
HTH_11	PF08279.7	gi|449066066|ref|YP_007433148.1|	-	0.11	12.1	0.2	0.19	11.4	0.1	1.3	1	0	0	1	1	1	0	HTH	domain
A2L_zn_ribbon	PF08792.5	gi|449066066|ref|YP_007433148.1|	-	0.17	11.4	2.0	6	6.4	0.3	2.3	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
zf-ribbon_3	PF13248.1	gi|449066066|ref|YP_007433148.1|	-	0.17	11.1	5.1	1.9	7.8	0.2	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
FUR	PF01475.14	gi|449066066|ref|YP_007433148.1|	-	0.26	11.2	2.9	2.6	7.9	0.2	2.1	1	1	0	2	2	2	0	Ferric	uptake	regulator	family
OrfB_Zn_ribbon	PF07282.6	gi|449066066|ref|YP_007433148.1|	-	0.35	10.5	2.1	0.63	9.7	1.4	1.4	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
TFIIS_C	PF01096.13	gi|449066066|ref|YP_007433148.1|	-	0.38	10.4	3.6	9.4	5.9	0.4	2.3	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zinc_ribbon_2	PF13240.1	gi|449066066|ref|YP_007433148.1|	-	0.39	10.2	4.7	6.4	6.3	0.7	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
eIF-5_eIF-2B	PF01873.12	gi|449066066|ref|YP_007433148.1|	-	0.88	9.2	0.1	0.88	9.2	0.0	2.2	1	1	1	2	2	2	0	Domain	found	in	IF2B/IF5
zinc_ribbon_5	PF13719.1	gi|449066066|ref|YP_007433148.1|	-	1.4	8.5	5.2	26	4.5	3.6	2.3	1	1	0	1	1	1	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|449066066|ref|YP_007433148.1|	-	1.7	8.3	5.4	35	4.1	3.7	2.3	1	1	0	1	1	1	0	zinc-ribbon	domain
zf-H2C2_2	PF13465.1	gi|449066066|ref|YP_007433148.1|	-	2.1	8.8	7.1	3.6	8.0	0.1	2.4	2	0	0	2	2	2	0	Zinc-finger	double	domain
DUF3797	PF12677.2	gi|449066066|ref|YP_007433148.1|	-	9.7	5.9	7.5	5.3	6.7	0.4	2.5	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3797)
DBI_PRT	PF02277.12	gi|449066067|ref|YP_007433149.1|	-	8.6e-33	113.8	0.0	1e-32	113.5	0.0	1.1	1	0	0	1	1	1	1	Phosphoribosyltransferase
Cnl2_NKP2	PF09447.5	gi|449066068|ref|YP_007433150.1|	-	0.0078	15.8	0.2	0.023	14.3	0.0	1.8	2	0	0	2	2	2	1	Cnl2/NKP2	family	protein
DUF4368	PF14287.1	gi|449066068|ref|YP_007433150.1|	-	0.034	13.9	0.2	0.065	13.0	0.2	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4368)
NadA	PF02445.11	gi|449066069|ref|YP_007433151.1|	-	7.3e-92	307.3	0.0	8.2e-92	307.1	0.0	1.0	1	0	0	1	1	1	1	Quinolinate	synthetase	A	protein
Aminotran_5	PF00266.14	gi|449066070|ref|YP_007433152.1|	-	3.4e-45	154.4	0.0	4.5e-45	153.9	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.15	gi|449066070|ref|YP_007433152.1|	-	0.0023	16.3	0.1	0.0037	15.6	0.1	1.3	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Aminotran_1_2	PF00155.16	gi|449066070|ref|YP_007433152.1|	-	0.05	12.5	0.2	2.6	6.9	0.0	2.1	2	0	0	2	2	2	0	Aminotransferase	class	I	and	II
AMP-binding	PF00501.23	gi|449066071|ref|YP_007433153.1|	-	2.5e-68	230.3	0.0	3.1e-68	230.0	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|449066071|ref|YP_007433153.1|	-	7.7e-18	65.2	0.1	1.5e-17	64.3	0.1	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
UPF0547	PF10571.4	gi|449066072|ref|YP_007433154.1|	-	0.0039	16.8	2.9	0.0074	15.9	2.0	1.4	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
NOB1_Zn_bind	PF08772.6	gi|449066072|ref|YP_007433154.1|	-	0.0069	16.1	3.2	0.017	14.9	2.2	1.6	1	0	0	1	1	1	1	Nin	one	binding	(NOB1)	Zn-ribbon	like
DZR	PF12773.2	gi|449066072|ref|YP_007433154.1|	-	0.045	13.5	0.3	0.062	13.1	0.2	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
zf-UBR	PF02207.15	gi|449066072|ref|YP_007433154.1|	-	0.048	13.3	1.3	0.074	12.7	0.9	1.2	1	0	0	1	1	1	0	Putative	zinc	finger	in	N-recognin	(UBR	box)
PIN	PF01850.16	gi|449066072|ref|YP_007433154.1|	-	0.12	12.7	0.2	0.19	12.0	0.1	1.3	1	0	0	1	1	1	0	PIN	domain
Ribosomal_L44	PF00935.14	gi|449066072|ref|YP_007433154.1|	-	0.21	11.6	5.0	0.38	10.8	3.1	1.7	1	1	1	2	2	2	0	Ribosomal	protein	L44
zinc_ribbon_2	PF13240.1	gi|449066072|ref|YP_007433154.1|	-	0.44	10.1	3.8	0.68	9.5	2.6	1.3	1	0	0	1	1	1	0	zinc-ribbon	domain
Zn-ribbon_8	PF09723.5	gi|449066072|ref|YP_007433154.1|	-	1.1	9.2	4.7	6.9	6.7	3.3	2.2	1	1	0	1	1	1	0	Zinc	ribbon	domain
Desulfoferrod_N	PF06397.7	gi|449066072|ref|YP_007433154.1|	-	6.3	6.2	10.2	2.7	7.4	1.8	2.3	1	1	1	2	2	2	0	Desulfoferrodoxin,	N-terminal	domain
NAD_kinase	PF01513.16	gi|449066073|ref|YP_007433155.1|	-	8e-23	80.6	0.1	1.1e-22	80.2	0.1	1.2	1	0	0	1	1	1	1	ATP-NAD	kinase
DAGK_cat	PF00781.19	gi|449066073|ref|YP_007433155.1|	-	0.0082	15.5	0.1	0.02	14.3	0.1	1.7	1	0	0	1	1	1	1	Diacylglycerol	kinase	catalytic	domain
SLT_beta	PF02258.11	gi|449066073|ref|YP_007433155.1|	-	0.11	12.3	0.1	0.23	11.3	0.0	1.5	1	0	0	1	1	1	0	Shiga-like	toxin	beta	subunit
DUF3301	PF11743.3	gi|449066074|ref|YP_007433156.1|	-	0.028	13.9	0.0	0.047	13.2	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3301)
Pyr_redox_2	PF07992.9	gi|449066075|ref|YP_007433157.1|	-	1e-19	71.2	0.0	1.8e-19	70.4	0.0	1.6	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|449066075|ref|YP_007433157.1|	-	7.2e-17	62.1	0.3	6.9e-10	39.3	0.0	2.8	2	1	1	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|449066075|ref|YP_007433157.1|	-	7.8e-14	51.8	0.2	5.6e-10	39.4	0.0	2.6	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
K_oxygenase	PF13434.1	gi|449066075|ref|YP_007433157.1|	-	2.2e-11	43.2	0.1	1.3e-08	34.1	0.0	3.0	2	1	1	3	3	3	2	L-lysine	6-monooxygenase	(NADPH-requiring)
HI0933_like	PF03486.9	gi|449066075|ref|YP_007433157.1|	-	4.6e-07	28.6	0.2	0.00031	19.3	0.0	3.4	4	0	0	4	4	4	1	HI0933-like	protein
NAD_binding_8	PF13450.1	gi|449066075|ref|YP_007433157.1|	-	6e-07	29.4	0.2	2.6e-05	24.1	0.1	2.5	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.12	gi|449066075|ref|YP_007433157.1|	-	1.2e-05	24.5	2.2	0.0056	15.7	0.0	2.9	3	0	0	3	3	3	2	Thi4	family
NAD_binding_7	PF13241.1	gi|449066075|ref|YP_007433157.1|	-	5.5e-05	23.3	0.1	0.0019	18.4	0.1	2.4	2	0	0	2	2	2	1	Putative	NAD(P)-binding
FMO-like	PF00743.14	gi|449066075|ref|YP_007433157.1|	-	0.00034	18.9	0.2	0.0015	16.8	0.0	1.9	1	1	1	2	2	2	1	Flavin-binding	monooxygenase-like
FAD_oxidored	PF12831.2	gi|449066075|ref|YP_007433157.1|	-	0.0016	17.6	0.1	0.015	14.3	0.0	2.1	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
DAO	PF01266.19	gi|449066075|ref|YP_007433157.1|	-	0.0021	17.0	2.1	0.027	13.3	0.1	3.0	2	2	1	3	3	3	1	FAD	dependent	oxidoreductase
NAD_binding_9	PF13454.1	gi|449066075|ref|YP_007433157.1|	-	0.023	14.4	1.8	6.7	6.4	0.1	3.3	3	1	0	3	3	3	0	FAD-NAD(P)-binding
FAD_binding_3	PF01494.14	gi|449066075|ref|YP_007433157.1|	-	0.024	13.6	0.4	6.8	5.6	0.0	3.0	2	1	1	3	3	3	0	FAD	binding	domain
FAD_binding_2	PF00890.19	gi|449066075|ref|YP_007433157.1|	-	0.041	12.7	3.5	0.38	9.5	0.0	2.9	2	1	0	2	2	2	0	FAD	binding	domain
Spermine_synth	PF01564.12	gi|449066075|ref|YP_007433157.1|	-	0.049	12.5	0.2	0.22	10.4	0.1	1.9	2	0	0	2	2	2	0	Spermine/spermidine	synthase
Met_10	PF02475.11	gi|449066076|ref|YP_007433158.1|	-	1.6e-33	116.0	0.7	2.3e-33	115.4	0.5	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
MTS	PF05175.9	gi|449066076|ref|YP_007433158.1|	-	1.6e-06	27.6	0.0	2.6e-05	23.6	0.0	2.2	2	0	0	2	2	2	1	Methyltransferase	small	domain
Methyltransf_26	PF13659.1	gi|449066076|ref|YP_007433158.1|	-	3.9e-05	23.6	0.0	9e-05	22.4	0.0	1.5	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|449066076|ref|YP_007433158.1|	-	5.9e-05	23.4	0.0	0.00014	22.2	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|449066076|ref|YP_007433158.1|	-	0.00051	19.2	0.0	0.00068	18.8	0.0	1.3	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_31	PF13847.1	gi|449066076|ref|YP_007433158.1|	-	0.0014	18.2	0.4	0.016	14.7	0.2	2.1	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|449066076|ref|YP_007433158.1|	-	0.0028	18.2	0.0	0.0043	17.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|449066076|ref|YP_007433158.1|	-	0.0045	16.3	0.1	0.019	14.3	0.0	1.9	2	0	0	2	2	2	1	Conserved	hypothetical	protein	95
POTRA_1	PF08478.5	gi|449066076|ref|YP_007433158.1|	-	0.014	15.4	0.1	0.038	14.0	0.1	1.8	1	0	0	1	1	1	0	POTRA	domain,	FtsQ-type
Methyltransf_25	PF13649.1	gi|449066076|ref|YP_007433158.1|	-	0.032	14.5	0.0	0.06	13.7	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|449066076|ref|YP_007433158.1|	-	0.049	13.1	0.1	0.14	11.7	0.0	1.8	1	1	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
Sulf_coat_C	PF12193.3	gi|449066076|ref|YP_007433158.1|	-	0.067	13.0	0.0	2.8	7.8	0.0	2.4	2	0	0	2	2	2	0	Sulfolobus	virus	coat	protein	C	terminal
DUF371	PF04027.8	gi|449066077|ref|YP_007433159.1|	-	7.5e-56	187.4	0.8	9e-56	187.1	0.6	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF371)
SKI	PF01202.17	gi|449066077|ref|YP_007433159.1|	-	0.066	13.0	0.0	0.093	12.5	0.0	1.2	1	0	0	1	1	1	0	Shikimate	kinase
MEF2_binding	PF09047.5	gi|449066077|ref|YP_007433159.1|	-	0.096	12.3	0.3	0.22	11.2	0.2	1.6	1	0	0	1	1	1	0	MEF2	binding
CRS1_YhbY	PF01985.16	gi|449066078|ref|YP_007433160.1|	-	2.1e-18	66.0	2.1	2.6e-18	65.8	1.5	1.1	1	0	0	1	1	1	1	CRS1	/	YhbY	(CRM)	domain
DUF1241	PF06840.6	gi|449066078|ref|YP_007433160.1|	-	0.028	13.6	0.3	0.028	13.6	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1241)
DUF104	PF01954.11	gi|449066078|ref|YP_007433160.1|	-	0.081	12.9	0.5	0.15	12.0	0.4	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF104
Pyr_redox	PF00070.22	gi|449066078|ref|YP_007433160.1|	-	0.13	12.7	1.0	0.28	11.5	0.6	1.5	1	1	1	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Rpr2	PF04032.11	gi|449066079|ref|YP_007433161.1|	-	1.5e-17	63.2	0.8	1.9e-17	62.9	0.6	1.1	1	0	0	1	1	1	1	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
EMG1	PF03587.9	gi|449066080|ref|YP_007433162.1|	-	1.7e-47	161.3	0.1	1.8e-47	161.2	0.1	1.0	1	0	0	1	1	1	1	EMG1/NEP1	methyltransferase
RHH_1	PF01402.16	gi|449066081|ref|YP_007433163.1|	-	0.056	13.3	0.5	0.15	11.9	0.1	2.1	2	0	0	2	2	2	0	Ribbon-helix-helix	protein,	copG	family
YppF	PF14178.1	gi|449066081|ref|YP_007433163.1|	-	0.26	10.8	1.9	13	5.3	0.1	3.0	3	0	0	3	3	3	0	YppF-like	protein
Amidinotransf	PF02274.12	gi|449066082|ref|YP_007433164.1|	-	0.032	13.3	0.0	0.34	9.9	0.0	2.3	1	1	0	1	1	1	0	Amidinotransferase
VitK2_biosynth	PF02621.9	gi|449066083|ref|YP_007433165.1|	-	1.3e-52	178.5	0.1	1.4e-52	178.3	0.0	1.0	1	0	0	1	1	1	1	Menaquinone	biosynthesis
Peptidase_M50	PF02163.17	gi|449066083|ref|YP_007433165.1|	-	0.031	13.2	0.1	0.047	12.6	0.1	1.3	1	0	0	1	1	1	0	Peptidase	family	M50
NTPase_I-T	PF01931.13	gi|449066084|ref|YP_007433166.1|	-	3.2e-36	124.5	0.0	3.6e-36	124.4	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF84
Thioredoxin	PF00085.15	gi|449066086|ref|YP_007433168.1|	-	9.1e-29	99.2	0.0	1e-28	99.0	0.0	1.0	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.1	gi|449066086|ref|YP_007433168.1|	-	3.4e-09	36.9	0.0	1.1e-07	31.9	0.0	2.0	1	1	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin_8	PF13905.1	gi|449066086|ref|YP_007433168.1|	-	1e-06	28.7	0.1	0.0073	16.3	0.0	2.2	1	1	1	2	2	2	2	Thioredoxin-like
Redoxin	PF08534.5	gi|449066086|ref|YP_007433168.1|	-	6.7e-06	25.7	0.2	0.011	15.3	0.0	2.1	1	1	1	2	2	2	2	Redoxin
Thioredoxin_3	PF13192.1	gi|449066086|ref|YP_007433168.1|	-	2.5e-05	23.9	0.0	3.6e-05	23.4	0.0	1.3	1	0	0	1	1	1	1	Thioredoxin	domain
AhpC-TSA	PF00578.16	gi|449066086|ref|YP_007433168.1|	-	0.00014	21.5	0.1	0.11	12.1	0.0	2.1	1	1	1	2	2	2	2	AhpC/TSA	family
Phosducin	PF02114.11	gi|449066086|ref|YP_007433168.1|	-	0.00027	19.7	0.0	0.00027	19.7	0.0	1.1	1	0	0	1	1	1	1	Phosducin
Thioredoxin_9	PF14595.1	gi|449066086|ref|YP_007433168.1|	-	0.00027	20.4	0.0	0.00031	20.2	0.0	1.1	1	0	0	1	1	1	1	Thioredoxin
HyaE	PF07449.6	gi|449066086|ref|YP_007433168.1|	-	0.00072	19.4	0.0	0.0012	18.7	0.0	1.5	1	1	0	1	1	1	1	Hydrogenase-1	expression	protein	HyaE
Thioredoxin_6	PF13848.1	gi|449066086|ref|YP_007433168.1|	-	0.0017	18.2	0.0	0.0025	17.6	0.0	1.3	1	1	0	1	1	1	1	Thioredoxin-like	domain
Calsequestrin	PF01216.12	gi|449066086|ref|YP_007433168.1|	-	0.0067	15.2	0.0	0.0067	15.2	0.0	1.1	1	0	0	1	1	1	1	Calsequestrin
DSBA	PF01323.15	gi|449066086|ref|YP_007433168.1|	-	0.13	11.7	0.4	0.66	9.5	0.0	1.9	1	1	1	2	2	2	0	DSBA-like	thioredoxin	domain
tRNA_deacylase	PF04414.7	gi|449066087|ref|YP_007433169.1|	-	4e-64	215.6	0.0	4.6e-64	215.4	0.0	1.0	1	0	0	1	1	1	1	D-aminoacyl-tRNA	deacylase
His_Phos_1	PF00300.17	gi|449066088|ref|YP_007433170.1|	-	4e-28	98.4	0.0	4.7e-28	98.2	0.0	1.1	1	0	0	1	1	1	1	Histidine	phosphatase	superfamily	(branch	1)
AAA_24	PF13479.1	gi|449066088|ref|YP_007433170.1|	-	0.057	12.9	0.0	0.11	12.1	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
CBS	PF00571.23	gi|449066089|ref|YP_007433171.1|	-	2.3e-29	100.9	1.4	4.2e-15	55.2	0.2	2.1	2	0	0	2	2	2	2	CBS	domain
DisA_N	PF02457.11	gi|449066089|ref|YP_007433171.1|	-	0.008	15.3	0.1	0.012	14.7	0.1	1.4	1	1	0	1	1	1	1	DisA	bacterial	checkpoint	controller	nucleotide-binding
DUF1840	PF08895.6	gi|449066089|ref|YP_007433171.1|	-	0.02	14.8	0.0	4.5	7.3	0.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1840)
TctC	PF03401.9	gi|449066089|ref|YP_007433171.1|	-	0.14	11.0	0.0	0.15	10.9	0.0	1.1	1	0	0	1	1	1	0	Tripartite	tricarboxylate	transporter	family	receptor
FdhE	PF04216.7	gi|449066091|ref|YP_007433173.1|	-	1.7e-05	24.7	0.2	1.7e-05	24.7	0.1	2.0	2	0	0	2	2	2	1	Protein	involved	in	formate	dehydrogenase	formation
Mod_r	PF07200.8	gi|449066091|ref|YP_007433173.1|	-	0.00013	21.9	15.7	0.00013	21.9	10.9	5.0	1	1	2	4	4	4	2	Modifier	of	rudimentary	(Mod(r))	protein
AAA_13	PF13166.1	gi|449066091|ref|YP_007433173.1|	-	0.0014	17.2	62.8	0.0086	14.6	19.3	2.7	1	1	0	2	2	2	2	AAA	domain
AAA_27	PF13514.1	gi|449066091|ref|YP_007433173.1|	-	0.0015	16.3	42.8	0.013	13.2	0.1	3.2	1	1	2	3	3	3	3	AAA	domain
SbcCD_C	PF13558.1	gi|449066091|ref|YP_007433173.1|	-	0.0025	17.6	0.0	0.028	14.3	0.0	2.4	2	0	0	2	2	2	1	Putative	exonuclease	SbcCD,	C	subunit
SMC_N	PF02463.14	gi|449066091|ref|YP_007433173.1|	-	0.008	15.4	21.3	0.044	13.0	13.6	2.8	2	1	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
FliD_C	PF07195.7	gi|449066091|ref|YP_007433173.1|	-	0.012	14.9	0.4	0.012	14.9	0.3	5.6	1	1	1	3	3	3	0	Flagellar	hook-associated	protein	2	C-terminus
PilJ	PF13675.1	gi|449066091|ref|YP_007433173.1|	-	0.063	13.6	11.5	7.1	6.9	1.6	4.4	3	1	0	3	3	3	0	Type	IV	pili	methyl-accepting	chemotaxis	transducer	N-term
MtrG	PF04210.8	gi|449066091|ref|YP_007433173.1|	-	0.1	12.2	0.3	0.1	12.2	0.2	5.6	3	2	4	7	7	7	0	Tetrahydromethanopterin	S-methyltransferase,	subunit	G
DNA_ligase_ZBD	PF03119.11	gi|449066091|ref|YP_007433173.1|	-	0.14	11.8	0.6	0.31	10.7	0.4	1.6	1	0	0	1	1	1	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Reo_sigmaC	PF04582.7	gi|449066091|ref|YP_007433173.1|	-	0.18	10.9	15.5	3.1	6.8	0.1	3.4	1	1	2	3	3	3	0	Reovirus	sigma	C	capsid	protein
Filament	PF00038.16	gi|449066091|ref|YP_007433173.1|	-	0.19	11.1	56.6	1.8	7.9	17.2	3.6	1	1	1	2	2	2	0	Intermediate	filament	protein
GAS	PF13851.1	gi|449066091|ref|YP_007433173.1|	-	0.25	10.5	63.7	1.6	7.8	11.4	4.9	1	1	3	4	4	4	0	Growth-arrest	specific	micro-tubule	binding
REV	PF00424.13	gi|449066091|ref|YP_007433173.1|	-	0.26	11.2	10.4	1	9.3	0.4	3.8	2	2	1	3	3	3	0	REV	protein	(anti-repression	trans-activator	protein)
DUF948	PF06103.6	gi|449066091|ref|YP_007433173.1|	-	0.53	10.1	40.8	2	8.3	1.2	6.5	4	2	4	8	8	7	0	Bacterial	protein	of	unknown	function	(DUF948)
NPV_P10	PF05531.7	gi|449066091|ref|YP_007433173.1|	-	1.8	8.9	36.0	35	4.7	0.9	6.3	3	2	2	5	5	5	0	Nucleopolyhedrovirus	P10	protein
Spc7	PF08317.6	gi|449066091|ref|YP_007433173.1|	-	1.9	7.0	66.1	1.5	7.4	17.9	3.7	1	1	3	4	4	4	0	Spc7	kinetochore	protein
APG17	PF04108.7	gi|449066091|ref|YP_007433173.1|	-	2.2	6.9	44.5	0.14	10.9	11.1	3.7	2	2	1	3	3	3	0	Autophagy	protein	Apg17
AAA_23	PF13476.1	gi|449066091|ref|YP_007433173.1|	-	2.3	8.5	85.8	1.8e+03	-1.0	0.2	4.3	1	1	1	2	2	1	0	AAA	domain
Atg14	PF10186.4	gi|449066091|ref|YP_007433173.1|	-	2.4	7.0	53.8	1.3	7.9	14.5	3.3	1	1	2	3	3	3	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
DUF869	PF05911.6	gi|449066091|ref|YP_007433173.1|	-	5.2	5.1	46.6	4.6	5.3	30.8	1.6	1	1	0	1	1	1	0	Plant	protein	of	unknown	function	(DUF869)
YlqD	PF11068.3	gi|449066091|ref|YP_007433173.1|	-	6.9	6.7	48.6	3.5	7.6	2.1	4.7	2	2	2	4	4	4	0	YlqD	protein
OmpH	PF03938.9	gi|449066091|ref|YP_007433173.1|	-	9.6	6.1	38.4	2.2	8.2	9.3	3.0	2	1	0	2	2	2	0	Outer	membrane	protein	(OmpH-like)
IU_nuc_hydro	PF01156.14	gi|449066092|ref|YP_007433174.1|	-	7.4e-74	248.7	0.0	8.3e-74	248.6	0.0	1.0	1	0	0	1	1	1	1	Inosine-uridine	preferring	nucleoside	hydrolase
FUR	PF01475.14	gi|449066093|ref|YP_007433175.1|	-	1.8e-21	76.2	0.1	2.2e-21	76.0	0.0	1.1	1	0	0	1	1	1	1	Ferric	uptake	regulator	family
HTH_20	PF12840.2	gi|449066093|ref|YP_007433175.1|	-	3.5e-06	26.7	0.0	6.1e-06	25.9	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
Penicillinase_R	PF03965.11	gi|449066093|ref|YP_007433175.1|	-	0.0024	17.9	0.0	0.0077	16.3	0.0	1.8	1	1	1	2	2	2	1	Penicillinase	repressor
PadR	PF03551.9	gi|449066093|ref|YP_007433175.1|	-	0.0025	17.5	0.1	0.0044	16.7	0.0	1.4	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_5	PF01022.15	gi|449066093|ref|YP_007433175.1|	-	0.01	15.5	0.0	0.18	11.4	0.0	2.4	1	1	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
TrmB	PF01978.14	gi|449066093|ref|YP_007433175.1|	-	0.015	15.0	0.0	0.051	13.2	0.0	2.1	2	1	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
HxlR	PF01638.12	gi|449066093|ref|YP_007433175.1|	-	0.023	14.3	0.0	0.035	13.7	0.0	1.4	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
HTH_24	PF13412.1	gi|449066093|ref|YP_007433175.1|	-	0.048	13.0	0.2	0.14	11.5	0.0	2.0	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|449066093|ref|YP_007433175.1|	-	0.057	13.0	0.2	0.21	11.2	0.0	2.2	2	1	0	2	2	2	0	HTH	domain
HTH_32	PF13565.1	gi|449066093|ref|YP_007433175.1|	-	0.057	14.2	0.0	0.14	12.9	0.0	1.7	2	0	0	2	2	2	0	Homeodomain-like	domain
MarR	PF01047.17	gi|449066093|ref|YP_007433175.1|	-	0.13	12.0	0.1	0.39	10.4	0.0	2.0	2	1	0	2	2	2	0	MarR	family
RGS-like	PF09128.6	gi|449066094|ref|YP_007433176.1|	-	0.014	14.8	0.0	0.023	14.2	0.0	1.3	1	0	0	1	1	1	0	Regulator	of	G	protein	signalling-like	domain
NurA	PF09376.5	gi|449066095|ref|YP_007433177.1|	-	1.7e-34	119.4	5.5	2.1e-34	119.1	3.8	1.1	1	0	0	1	1	1	1	NurA	domain
SMC_N	PF02463.14	gi|449066096|ref|YP_007433178.1|	-	3.9e-20	72.0	13.7	2.2e-11	43.4	2.7	4.3	5	0	0	5	5	4	2	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|449066096|ref|YP_007433178.1|	-	9.2e-20	71.8	23.3	9.2e-20	71.8	16.2	6.6	1	1	4	5	5	2	1	AAA	domain
Rad50_zn_hook	PF04423.9	gi|449066096|ref|YP_007433178.1|	-	2.2e-14	52.6	1.3	2.2e-14	52.6	0.9	9.2	9	2	3	12	12	11	1	Rad50	zinc	hook	motif
AAA_27	PF13514.1	gi|449066096|ref|YP_007433178.1|	-	2.3e-12	45.5	77.6	6.7e-05	20.8	22.3	5.0	3	1	0	4	4	4	4	AAA	domain
AAA_13	PF13166.1	gi|449066096|ref|YP_007433178.1|	-	2.4e-10	39.5	117.8	0.0048	15.4	11.8	6.0	1	1	4	6	6	6	5	AAA	domain
SbcCD_C	PF13558.1	gi|449066096|ref|YP_007433178.1|	-	6.9e-08	32.3	0.1	2.1e-07	30.7	0.0	1.8	2	0	0	2	2	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_21	PF13304.1	gi|449066096|ref|YP_007433178.1|	-	1.2e-06	28.6	35.6	4.3e-06	26.8	9.1	4.5	1	1	2	4	4	2	2	AAA	domain
Reo_sigmaC	PF04582.7	gi|449066096|ref|YP_007433178.1|	-	9.6e-06	24.9	18.4	0.18	10.9	0.2	5.3	1	1	3	6	6	6	3	Reovirus	sigma	C	capsid	protein
AAA_29	PF13555.1	gi|449066096|ref|YP_007433178.1|	-	1.2e-05	24.7	0.0	2.3e-05	23.8	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
DUF258	PF03193.11	gi|449066096|ref|YP_007433178.1|	-	5.6e-05	22.3	0.1	0.00037	19.7	0.1	2.5	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
ABC_tran	PF00005.22	gi|449066096|ref|YP_007433178.1|	-	0.00013	22.3	2.3	0.00013	22.3	1.6	5.5	1	1	2	3	3	2	1	ABC	transporter
IncA	PF04156.9	gi|449066096|ref|YP_007433178.1|	-	0.00023	20.8	18.2	0.00023	20.8	12.6	5.9	1	1	5	6	6	5	1	IncA	protein
DUF904	PF06005.7	gi|449066096|ref|YP_007433178.1|	-	0.0038	17.4	8.5	0.0038	17.4	5.9	9.8	5	3	2	7	7	3	1	Protein	of	unknown	function	(DUF904)
Seryl_tRNA_N	PF02403.17	gi|449066096|ref|YP_007433178.1|	-	0.0099	15.8	8.6	0.0099	15.8	6.0	8.7	2	2	6	8	8	7	4	Seryl-tRNA	synthetase	N-terminal	domain
Miro	PF08477.8	gi|449066096|ref|YP_007433178.1|	-	0.028	14.9	0.2	0.028	14.9	0.1	3.9	2	1	0	3	3	3	0	Miro-like	protein
AXE1	PF05448.7	gi|449066096|ref|YP_007433178.1|	-	0.031	12.7	2.1	0.091	11.2	1.4	1.8	1	0	0	1	1	1	0	Acetyl	xylan	esterase	(AXE1)
GAS	PF13851.1	gi|449066096|ref|YP_007433178.1|	-	0.85	8.7	131.9	0.16	11.1	12.1	6.2	2	2	4	6	6	6	0	Growth-arrest	specific	micro-tubule	binding
NPV_P10	PF05531.7	gi|449066096|ref|YP_007433178.1|	-	1	9.6	55.0	1.9	8.8	0.2	9.4	4	2	5	10	10	9	0	Nucleopolyhedrovirus	P10	protein
DUF3584	PF12128.3	gi|449066096|ref|YP_007433178.1|	-	10	3.3	91.4	0.65	7.2	26.7	3.2	1	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3584)
Metallophos	PF00149.23	gi|449066097|ref|YP_007433179.1|	-	3.1e-15	56.1	1.6	3.3e-15	56.0	0.3	1.7	2	0	0	2	2	2	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|449066097|ref|YP_007433179.1|	-	3.6e-13	49.6	0.0	5.4e-13	49.0	0.0	1.3	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
DUF4355	PF14265.1	gi|449066097|ref|YP_007433179.1|	-	6	6.8	9.7	18	5.3	1.4	3.0	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4355)
DUF87	PF01935.12	gi|449066098|ref|YP_007433180.1|	-	2.6e-48	164.8	3.8	4e-48	164.2	2.7	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF87
AAA_10	PF12846.2	gi|449066098|ref|YP_007433180.1|	-	6.2e-23	81.6	1.3	1.8e-22	80.1	0.9	1.7	1	1	0	1	1	1	1	AAA-like	domain
DUF853	PF05872.7	gi|449066098|ref|YP_007433180.1|	-	3.1e-12	45.6	0.0	1.2e-06	27.1	0.0	2.3	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
HAS-barrel	PF09378.5	gi|449066098|ref|YP_007433180.1|	-	1.8e-11	43.7	1.9	4.8e-11	42.4	0.0	2.7	2	1	0	2	2	2	1	HAS	barrel	domain
TrwB_AAD_bind	PF10412.4	gi|449066098|ref|YP_007433180.1|	-	2.9e-05	22.8	0.0	0.00017	20.3	0.0	2.0	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
FtsK_SpoIIIE	PF01580.13	gi|449066098|ref|YP_007433180.1|	-	3.7e-05	23.2	0.0	0.0085	15.5	0.0	2.3	2	0	0	2	2	2	2	FtsK/SpoIIIE	family
IF2_N	PF04760.10	gi|449066098|ref|YP_007433180.1|	-	0.023	14.3	0.2	0.34	10.6	0.1	2.5	2	0	0	2	2	2	0	Translation	initiation	factor	IF-2,	N-terminal	region
ABC_tran	PF00005.22	gi|449066098|ref|YP_007433180.1|	-	0.11	12.8	1.6	0.23	11.7	1.1	1.6	1	1	0	1	1	1	0	ABC	transporter
DEAD	PF00270.24	gi|449066098|ref|YP_007433180.1|	-	0.12	11.8	0.2	4.1	6.8	0.2	2.6	1	1	0	1	1	1	0	DEAD/DEAH	box	helicase
ResIII	PF04851.10	gi|449066098|ref|YP_007433180.1|	-	0.18	11.5	1.9	0.81	9.4	1.1	2.2	1	1	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
DUF892	PF05974.7	gi|449066099|ref|YP_007433181.1|	-	0.0016	18.2	8.7	0.079	12.7	0.9	2.1	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF892)
Phyto-Amp	PF15438.1	gi|449066099|ref|YP_007433181.1|	-	0.0019	17.8	0.6	0.64	9.6	0.1	2.0	1	1	1	2	2	2	2	Antigenic	membrane	protein	of	phytoplasma
TRCF	PF03461.10	gi|449066099|ref|YP_007433181.1|	-	0.0033	17.3	0.2	1.9	8.4	0.0	2.2	2	0	0	2	2	2	2	TRCF	domain
MobB	PF03205.9	gi|449066099|ref|YP_007433181.1|	-	0.011	15.4	2.3	0.17	11.5	0.2	2.0	1	1	1	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Big_2	PF02368.13	gi|449066099|ref|YP_007433181.1|	-	0.012	15.4	0.0	6.2	6.7	0.0	2.4	2	0	0	2	2	2	0	Bacterial	Ig-like	domain	(group	2)
DUF4423	PF14394.1	gi|449066099|ref|YP_007433181.1|	-	0.031	13.8	1.7	3.7	7.0	0.1	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4423)
DltD_C	PF04914.7	gi|449066099|ref|YP_007433181.1|	-	0.06	13.2	0.1	0.23	11.2	0.0	1.8	1	1	0	1	1	1	0	DltD	C-terminal	region
DNA_ligase_A_C	PF04679.10	gi|449066099|ref|YP_007433181.1|	-	0.15	12.4	0.1	5.4	7.5	0.0	2.1	1	1	1	2	2	2	0	ATP	dependent	DNA	ligase	C	terminal	region
MOR2-PAG1_C	PF14225.1	gi|449066099|ref|YP_007433181.1|	-	0.19	11.4	1.1	11	5.7	0.1	2.0	1	1	1	2	2	2	0	Cell	morphogenesis	C-terminal
Ferritin	PF00210.19	gi|449066099|ref|YP_007433181.1|	-	0.33	10.6	4.0	1.6	8.4	1.5	2.0	1	1	1	2	2	2	0	Ferritin-like	domain
FTR1	PF03239.9	gi|449066100|ref|YP_007433182.1|	-	0.013	14.4	0.1	0.016	14.2	0.1	1.0	1	0	0	1	1	1	0	Iron	permease	FTR1	family
FliL	PF03748.9	gi|449066100|ref|YP_007433182.1|	-	0.014	15.3	0.6	0.014	15.3	0.4	2.1	1	1	0	2	2	2	0	Flagellar	basal	body-associated	protein	FliL
DUF1959	PF09218.5	gi|449066100|ref|YP_007433182.1|	-	0.027	14.2	0.2	0.049	13.4	0.1	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1959)
Carb_kinase	PF01256.12	gi|449066101|ref|YP_007433183.1|	-	7.9e-55	185.7	0.1	1.1e-54	185.3	0.0	1.2	1	0	0	1	1	1	1	Carbohydrate	kinase
YjeF_N	PF03853.10	gi|449066101|ref|YP_007433183.1|	-	4.7e-41	140.2	0.0	9.8e-41	139.1	0.0	1.6	1	0	0	1	1	1	1	YjeF-related	protein	N-terminus
HK	PF02110.10	gi|449066101|ref|YP_007433183.1|	-	3e-07	29.8	0.1	9.8e-07	28.1	0.1	1.8	1	1	0	1	1	1	1	Hydroxyethylthiazole	kinase	family
Phos_pyr_kin	PF08543.7	gi|449066101|ref|YP_007433183.1|	-	8.3e-05	21.8	0.0	0.00015	21.0	0.0	1.3	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
KR	PF08659.5	gi|449066101|ref|YP_007433183.1|	-	0.0081	15.8	0.0	0.016	14.9	0.0	1.4	1	0	0	1	1	1	1	KR	domain
adh_short	PF00106.20	gi|449066101|ref|YP_007433183.1|	-	0.017	15.0	0.0	0.034	14.0	0.0	1.5	1	0	0	1	1	1	0	short	chain	dehydrogenase
NAD_binding_10	PF13460.1	gi|449066101|ref|YP_007433183.1|	-	0.079	12.9	0.2	18	5.2	0.0	2.6	2	1	1	3	3	3	0	NADH(P)-binding
NEP	PF10167.4	gi|449066101|ref|YP_007433183.1|	-	0.12	12.0	0.8	2.1	8.0	0.0	2.8	3	0	0	3	3	3	0	Uncharacterised	conserved	protein
GATase	PF00117.23	gi|449066101|ref|YP_007433183.1|	-	0.14	11.6	0.0	0.26	10.7	0.0	1.4	1	0	0	1	1	1	0	Glutamine	amidotransferase	class-I
AhpC-TSA	PF00578.16	gi|449066102|ref|YP_007433184.1|	-	1.7e-39	134.3	0.0	1.9e-39	134.1	0.0	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|449066102|ref|YP_007433184.1|	-	3.5e-26	91.4	0.0	4e-26	91.3	0.0	1.0	1	0	0	1	1	1	1	Redoxin
Thioredoxin_8	PF13905.1	gi|449066102|ref|YP_007433184.1|	-	1.2e-05	25.2	0.0	1.8e-05	24.7	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin-like
DUF899	PF05988.7	gi|449066102|ref|YP_007433184.1|	-	0.001	18.5	0.0	0.0011	18.4	0.0	1.0	1	0	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF899)
AhpC-TSA_2	PF13911.1	gi|449066102|ref|YP_007433184.1|	-	0.029	14.2	0.0	0.043	13.7	0.0	1.3	1	0	0	1	1	1	0	AhpC/TSA	antioxidant	enzyme
Costars	PF14705.1	gi|449066102|ref|YP_007433184.1|	-	0.084	12.8	0.1	0.82	9.7	0.0	2.2	2	1	0	2	2	2	0	Costars
PEPcase_2	PF14010.1	gi|449066103|ref|YP_007433185.1|	-	1e-202	673.8	0.9	1.2e-202	673.6	0.6	1.0	1	0	0	1	1	1	1	Phosphoenolpyruvate	carboxylase
DUF4041	PF13250.1	gi|449066103|ref|YP_007433185.1|	-	0.15	11.5	3.0	0.37	10.3	0.3	2.5	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4041)
ArgK	PF03308.11	gi|449066105|ref|YP_007433187.1|	-	1.1e-85	286.6	0.2	1.4e-85	286.3	0.1	1.0	1	0	0	1	1	1	1	ArgK	protein
cobW	PF02492.14	gi|449066105|ref|YP_007433187.1|	-	4.1e-09	36.1	0.7	3.9e-08	32.9	0.5	2.2	1	1	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_10	PF12846.2	gi|449066105|ref|YP_007433187.1|	-	4.8e-06	26.2	0.1	1.1e-05	24.9	0.0	1.6	2	0	0	2	2	2	1	AAA-like	domain
GTP_EFTU	PF00009.22	gi|449066105|ref|YP_007433187.1|	-	9.4e-06	25.1	0.1	0.0068	15.8	0.0	2.3	2	0	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
AAA_17	PF13207.1	gi|449066105|ref|YP_007433187.1|	-	1.3e-05	26.0	0.4	4e-05	24.4	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
MobB	PF03205.9	gi|449066105|ref|YP_007433187.1|	-	1.6e-05	24.6	0.5	3.7e-05	23.4	0.0	1.8	2	0	0	2	2	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
DUF87	PF01935.12	gi|449066105|ref|YP_007433187.1|	-	1.6e-05	24.8	0.9	0.00013	21.8	0.0	2.1	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF87
AAA_19	PF13245.1	gi|449066105|ref|YP_007433187.1|	-	0.00012	21.7	0.1	0.00036	20.2	0.0	1.8	2	0	0	2	2	1	1	Part	of	AAA	domain
SRP54	PF00448.17	gi|449066105|ref|YP_007433187.1|	-	0.0002	20.8	0.0	0.036	13.5	0.0	2.2	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
NTPase_1	PF03266.10	gi|449066105|ref|YP_007433187.1|	-	0.00021	21.0	0.1	0.00056	19.6	0.1	1.7	1	0	0	1	1	1	1	NTPase
AAA_16	PF13191.1	gi|449066105|ref|YP_007433187.1|	-	0.00022	21.2	0.1	0.00037	20.5	0.0	1.4	1	0	0	1	1	1	1	AAA	ATPase	domain
TrwB_AAD_bind	PF10412.4	gi|449066105|ref|YP_007433187.1|	-	0.00039	19.1	0.0	0.00061	18.5	0.0	1.2	1	0	0	1	1	1	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA_18	PF13238.1	gi|449066105|ref|YP_007433187.1|	-	0.00078	19.7	1.7	0.0015	18.8	0.1	2.1	2	0	0	2	2	2	1	AAA	domain
DUF258	PF03193.11	gi|449066105|ref|YP_007433187.1|	-	0.00094	18.4	0.0	0.0034	16.5	0.0	1.8	2	0	0	2	2	2	1	Protein	of	unknown	function,	DUF258
FtsK_SpoIIIE	PF01580.13	gi|449066105|ref|YP_007433187.1|	-	0.00096	18.6	0.0	0.0015	18.0	0.0	1.4	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
NB-ARC	PF00931.17	gi|449066105|ref|YP_007433187.1|	-	0.001	17.9	0.0	0.0017	17.2	0.0	1.2	1	0	0	1	1	1	1	NB-ARC	domain
AAA_22	PF13401.1	gi|449066105|ref|YP_007433187.1|	-	0.0013	18.8	0.0	0.0029	17.7	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
KAP_NTPase	PF07693.9	gi|449066105|ref|YP_007433187.1|	-	0.0015	17.6	0.0	0.0019	17.2	0.0	1.2	1	1	0	1	1	1	1	KAP	family	P-loop	domain
ABC_tran	PF00005.22	gi|449066105|ref|YP_007433187.1|	-	0.0015	18.8	0.1	0.0037	17.5	0.0	1.6	1	0	0	1	1	1	1	ABC	transporter
ATP_bind_1	PF03029.12	gi|449066105|ref|YP_007433187.1|	-	0.0016	17.9	0.0	0.0039	16.7	0.0	1.6	1	0	0	1	1	1	1	Conserved	hypothetical	ATP	binding	protein
MMR_HSR1	PF01926.18	gi|449066105|ref|YP_007433187.1|	-	0.0036	17.2	0.7	0.0084	16.0	0.5	1.9	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
AAA_29	PF13555.1	gi|449066105|ref|YP_007433187.1|	-	0.0052	16.2	0.2	0.025	14.0	0.3	2.0	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
Viral_helicase1	PF01443.13	gi|449066105|ref|YP_007433187.1|	-	0.0088	15.5	0.1	0.016	14.7	0.0	1.4	1	0	0	1	1	1	1	Viral	(Superfamily	1)	RNA	helicase
AAA_14	PF13173.1	gi|449066105|ref|YP_007433187.1|	-	0.0088	15.9	0.0	0.02	14.7	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
CbiA	PF01656.18	gi|449066105|ref|YP_007433187.1|	-	0.01	15.2	1.2	0.013	14.8	0.0	1.8	2	0	0	2	2	2	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_30	PF13604.1	gi|449066105|ref|YP_007433187.1|	-	0.011	15.3	0.0	0.019	14.5	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
DUF815	PF05673.8	gi|449066105|ref|YP_007433187.1|	-	0.014	14.3	0.0	0.027	13.4	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
Zeta_toxin	PF06414.7	gi|449066105|ref|YP_007433187.1|	-	0.015	14.4	0.0	0.027	13.5	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
Miro	PF08477.8	gi|449066105|ref|YP_007433187.1|	-	0.017	15.6	0.1	0.041	14.3	0.0	1.6	1	0	0	1	1	1	0	Miro-like	protein
AAA_28	PF13521.1	gi|449066105|ref|YP_007433187.1|	-	0.023	14.6	0.2	0.048	13.6	0.1	1.6	2	0	0	2	2	1	0	AAA	domain
DUF2075	PF09848.4	gi|449066105|ref|YP_007433187.1|	-	0.023	13.6	0.0	0.04	12.8	0.0	1.4	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_25	PF13481.1	gi|449066105|ref|YP_007433187.1|	-	0.025	14.0	0.0	0.046	13.1	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
MipZ	PF09140.6	gi|449066105|ref|YP_007433187.1|	-	0.03	13.3	0.0	0.051	12.6	0.0	1.5	1	0	0	1	1	1	0	ATPase	MipZ
NACHT	PF05729.7	gi|449066105|ref|YP_007433187.1|	-	0.031	13.9	0.0	0.066	12.8	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
PPV_E1_C	PF00519.12	gi|449066105|ref|YP_007433187.1|	-	0.045	12.3	0.0	0.074	11.6	0.0	1.3	1	0	0	1	1	1	0	Papillomavirus	helicase
PRK	PF00485.13	gi|449066105|ref|YP_007433187.1|	-	0.051	13.1	0.1	0.083	12.4	0.1	1.3	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_33	PF13671.1	gi|449066105|ref|YP_007433187.1|	-	0.063	13.1	0.1	0.12	12.2	0.1	1.4	1	0	0	1	1	1	0	AAA	domain
DAP3	PF10236.4	gi|449066105|ref|YP_007433187.1|	-	0.073	11.9	0.0	0.11	11.3	0.0	1.2	1	0	0	1	1	1	0	Mitochondrial	ribosomal	death-associated	protein	3
KTI12	PF08433.5	gi|449066105|ref|YP_007433187.1|	-	0.078	12.1	0.9	0.21	10.7	0.0	1.9	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
AAA_11	PF13086.1	gi|449066105|ref|YP_007433187.1|	-	0.083	12.4	0.1	0.13	11.8	0.0	1.5	2	0	0	2	2	2	0	AAA	domain
T2SE	PF00437.15	gi|449066105|ref|YP_007433187.1|	-	0.098	11.5	0.6	0.18	10.6	0.0	1.7	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
B12-binding	PF02310.14	gi|449066106|ref|YP_007433188.1|	-	3.2e-21	75.4	0.4	4.1e-21	75.0	0.3	1.1	1	0	0	1	1	1	1	B12	binding	domain
TPP_enzyme_N	PF02776.13	gi|449066106|ref|YP_007433188.1|	-	0.024	14.1	0.0	1.9	7.9	0.0	2.1	2	0	0	2	2	2	0	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
IMPDH	PF00478.20	gi|449066106|ref|YP_007433188.1|	-	0.058	12.2	0.3	0.07	12.0	0.2	1.2	1	0	0	1	1	1	0	IMP	dehydrogenase	/	GMP	reductase	domain
QRPTase_C	PF01729.14	gi|449066106|ref|YP_007433188.1|	-	0.077	12.5	0.1	0.1	12.1	0.1	1.2	1	0	0	1	1	1	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
Nitro_FeMo-Co	PF02579.12	gi|449066106|ref|YP_007433188.1|	-	0.15	12.1	0.9	20	5.3	0.0	2.8	2	1	2	4	4	4	0	Dinitrogenase	iron-molybdenum	cofactor
7kD_DNA_binding	PF02294.13	gi|449066107|ref|YP_007433189.1|	-	7.7e-42	140.8	4.1	8.7e-42	140.6	2.8	1.0	1	0	0	1	1	1	1	7kD	DNA-binding	domain
Sigma70_r4_2	PF08281.7	gi|449066108|ref|YP_007433190.1|	-	0.0043	16.4	0.1	0.0079	15.6	0.0	1.3	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_23	PF13384.1	gi|449066108|ref|YP_007433190.1|	-	0.0054	16.3	0.0	0.01	15.4	0.0	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
Trp_repressor	PF01371.14	gi|449066108|ref|YP_007433190.1|	-	0.0073	16.2	0.0	0.0099	15.7	0.0	1.3	1	0	0	1	1	1	1	Trp	repressor	protein
Sigma70_r4	PF04545.11	gi|449066108|ref|YP_007433190.1|	-	0.0081	15.4	0.0	0.012	14.8	0.0	1.4	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_3	PF01381.17	gi|449066108|ref|YP_007433190.1|	-	0.019	14.7	0.1	0.03	14.1	0.1	1.3	1	0	0	1	1	1	0	Helix-turn-helix
Terminase_5	PF06056.7	gi|449066108|ref|YP_007433190.1|	-	0.024	14.1	0.1	0.044	13.3	0.0	1.4	1	0	0	1	1	1	0	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_38	PF13936.1	gi|449066108|ref|YP_007433190.1|	-	0.027	14.0	0.0	0.041	13.4	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
GerE	PF00196.14	gi|449066108|ref|YP_007433190.1|	-	0.034	13.4	0.0	0.06	12.6	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
HTH_Crp_2	PF13545.1	gi|449066108|ref|YP_007433190.1|	-	0.05	13.3	0.0	0.069	12.9	0.0	1.2	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
HTH_24	PF13412.1	gi|449066108|ref|YP_007433190.1|	-	0.071	12.5	0.0	0.13	11.6	0.0	1.5	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
tRNA-synt_2	PF00152.15	gi|449066109|ref|YP_007433191.1|	-	1.9e-93	312.9	0.3	2.3e-93	312.6	0.2	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.20	gi|449066109|ref|YP_007433191.1|	-	4.2e-10	39.3	0.3	8.6e-10	38.3	0.2	1.5	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.15	gi|449066109|ref|YP_007433191.1|	-	3.5e-09	36.2	0.6	2.8e-06	26.7	0.0	3.0	3	0	0	3	3	3	2	tRNA	synthetases	class	II	core	domain	(F)
LEM	PF03020.10	gi|449066109|ref|YP_007433191.1|	-	0.029	13.8	0.1	0.16	11.4	0.0	2.3	2	0	0	2	2	2	0	LEM	domain
tRNA-synt_2b	PF00587.20	gi|449066109|ref|YP_007433191.1|	-	0.068	12.7	0.1	8.5	5.9	0.0	2.4	2	0	0	2	2	2	0	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
SAP	PF02037.22	gi|449066109|ref|YP_007433191.1|	-	0.13	11.8	0.1	0.73	9.4	0.0	2.4	2	0	0	2	2	2	0	SAP	domain
WWE	PF02825.15	gi|449066109|ref|YP_007433191.1|	-	0.18	11.2	0.8	3.3	7.2	0.1	2.9	3	0	0	3	3	3	0	WWE	domain
Phage_DsbA	PF11126.3	gi|449066109|ref|YP_007433191.1|	-	0.72	9.9	5.5	1.1	9.3	0.1	3.1	3	0	0	3	3	3	0	Transcriptional	regulator	DsbA
Peptidase_M50	PF02163.17	gi|449066110|ref|YP_007433192.1|	-	6e-27	93.8	2.0	3.3e-26	91.4	0.1	2.5	2	2	0	2	2	2	1	Peptidase	family	M50
PDZ_2	PF13180.1	gi|449066110|ref|YP_007433192.1|	-	0.0037	17.1	0.0	0.013	15.3	0.0	1.9	2	0	0	2	2	2	1	PDZ	domain
NTP_transf_2	PF01909.18	gi|449066111|ref|YP_007433193.1|	-	2.5e-07	30.8	0.4	6.4e-07	29.6	0.2	2.1	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
DUF1122	PF06557.6	gi|449066112|ref|YP_007433194.1|	-	1.1e-74	249.2	0.2	1.2e-74	249.1	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1122)
Radical_SAM	PF04055.16	gi|449066113|ref|YP_007433195.1|	-	6.4e-11	42.7	0.1	1.8e-08	34.7	0.1	2.7	2	1	0	2	2	2	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|449066113|ref|YP_007433195.1|	-	2.8e-09	37.0	0.0	5.4e-09	36.1	0.0	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|449066113|ref|YP_007433195.1|	-	8.1e-07	29.2	0.1	1.8e-06	28.1	0.0	1.6	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
eRF1_1	PF03463.10	gi|449066114|ref|YP_007433196.1|	-	3.7e-27	94.4	3.1	5.8e-27	93.8	0.9	2.0	2	0	0	2	2	2	1	eRF1	domain	1
eRF1_3	PF03465.10	gi|449066114|ref|YP_007433196.1|	-	3.8e-21	75.4	5.2	2e-20	73.1	0.2	2.7	2	1	0	2	2	2	1	eRF1	domain	3
eRF1_2	PF03464.10	gi|449066114|ref|YP_007433196.1|	-	2.4e-14	53.7	1.3	4.5e-14	52.9	0.4	1.9	2	0	0	2	2	2	1	eRF1	domain	2
Maelstrom	PF13017.1	gi|449066114|ref|YP_007433196.1|	-	0.024	14.1	0.5	0.26	10.7	0.4	2.4	1	1	0	1	1	1	0	piRNA	pathway	germ-plasm	component
Acetyltransf_1	PF00583.19	gi|449066115|ref|YP_007433197.1|	-	1.5e-12	47.3	0.2	2.2e-12	46.8	0.2	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|449066115|ref|YP_007433197.1|	-	7.4e-12	45.2	0.5	1.1e-11	44.7	0.4	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|449066115|ref|YP_007433197.1|	-	3e-10	40.2	3.2	5.2e-10	39.4	1.1	1.8	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|449066115|ref|YP_007433197.1|	-	2.8e-06	27.4	0.0	3.6e-06	27.0	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|449066115|ref|YP_007433197.1|	-	0.00015	21.4	0.0	0.00021	20.9	0.0	1.2	1	0	0	1	1	1	1	FR47-like	protein
GNAT_acetyltr_2	PF13718.1	gi|449066115|ref|YP_007433197.1|	-	0.0052	16.1	0.0	0.082	12.2	0.0	2.0	1	1	0	1	1	1	1	GNAT	acetyltransferase	2
Acetyltransf_8	PF13523.1	gi|449066115|ref|YP_007433197.1|	-	0.024	14.5	0.0	0.032	14.1	0.0	1.3	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|449066115|ref|YP_007433197.1|	-	0.026	14.3	0.0	0.079	12.8	0.0	1.9	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
DNA_pol_B	PF00136.16	gi|449066116|ref|YP_007433198.1|	-	1.1e-58	199.1	0.5	1.7e-58	198.5	0.3	1.2	1	0	0	1	1	1	1	DNA	polymerase	family	B
DNA_pol_B_exo1	PF03104.14	gi|449066116|ref|YP_007433198.1|	-	6.6e-37	127.0	10.9	1.1e-36	126.3	5.2	2.6	2	1	0	2	2	2	1	DNA	polymerase	family	B,	exonuclease	domain
RNase_H_2	PF13482.1	gi|449066116|ref|YP_007433198.1|	-	1.7e-06	27.9	0.4	6.7e-06	26.0	0.0	2.3	3	0	0	3	3	3	1	RNase_H	superfamily
TBPIP	PF07106.8	gi|449066116|ref|YP_007433198.1|	-	0.063	12.8	2.5	0.14	11.6	0.1	2.6	3	0	0	3	3	3	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
Toprim_4	PF13662.1	gi|449066117|ref|YP_007433199.1|	-	1.8e-09	37.4	0.0	5.5e-09	35.9	0.0	1.8	1	0	0	1	1	1	1	Toprim	domain
Toprim	PF01751.17	gi|449066117|ref|YP_007433199.1|	-	2.1e-05	24.3	2.5	5.6e-05	23.0	0.1	2.5	2	0	0	2	2	2	1	Toprim	domain
DUF1822	PF08852.6	gi|449066117|ref|YP_007433199.1|	-	0.0046	15.8	0.2	0.0049	15.7	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1822)
Toprim_2	PF13155.1	gi|449066117|ref|YP_007433199.1|	-	0.03	14.6	0.0	0.078	13.3	0.0	1.9	1	1	0	1	1	1	0	Toprim-like
B5	PF03484.10	gi|449066117|ref|YP_007433199.1|	-	0.075	12.8	1.3	2.8	7.8	0.2	3.2	2	1	0	2	2	2	0	tRNA	synthetase	B5	domain
TPR_12	PF13424.1	gi|449066117|ref|YP_007433199.1|	-	0.1	12.5	0.1	0.19	11.6	0.1	1.3	1	0	0	1	1	1	0	Tetratricopeptide	repeat
FliP	PF00813.15	gi|449066117|ref|YP_007433199.1|	-	0.2	11.3	2.1	0.33	10.6	1.5	1.3	1	0	0	1	1	1	0	FliP	family
tRNA-synt_1b	PF00579.20	gi|449066118|ref|YP_007433200.1|	-	1.2e-47	162.4	0.6	9.4e-36	123.4	0.1	2.1	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(W	and	Y)
Ribosomal_L6e	PF01159.14	gi|449066119|ref|YP_007433201.1|	-	0.0019	18.4	1.3	0.0023	18.1	0.9	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L6e
dNK	PF01712.14	gi|449066119|ref|YP_007433201.1|	-	0.091	12.6	1.6	0.14	12.0	1.1	1.5	1	1	0	1	1	1	0	Deoxynucleoside	kinase
NAD_binding_4	PF07993.7	gi|449066119|ref|YP_007433201.1|	-	0.1	11.5	0.0	0.12	11.3	0.0	1.1	1	0	0	1	1	1	0	Male	sterility	protein
KH_4	PF13083.1	gi|449066119|ref|YP_007433201.1|	-	0.78	9.4	2.9	3.6	7.3	0.3	2.2	2	0	0	2	2	2	0	KH	domain
UPF0047	PF01894.12	gi|449066120|ref|YP_007433202.1|	-	2.5e-38	130.5	0.0	2.9e-38	130.2	0.0	1.1	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0047
AIRS	PF00586.19	gi|449066121|ref|YP_007433203.1|	-	1.9e-09	37.6	0.0	4.9e-09	36.3	0.0	1.7	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
AIRS_C	PF02769.17	gi|449066121|ref|YP_007433203.1|	-	3.5e-07	30.3	0.1	8.4e-07	29.1	0.0	1.6	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
Apolipoprotein	PF01442.13	gi|449066121|ref|YP_007433203.1|	-	0.13	11.7	0.1	2.4	7.6	0.0	2.1	2	0	0	2	2	2	0	Apolipoprotein	A1/A4/E	domain
Ribosomal_S13	PF00416.17	gi|449066122|ref|YP_007433204.1|	-	2.7e-37	127.4	0.3	3.3e-37	127.1	0.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S13/S18
HHH_4	PF14490.1	gi|449066122|ref|YP_007433204.1|	-	0.0057	16.3	0.1	0.0083	15.8	0.0	1.3	1	0	0	1	1	1	1	Helix-hairpin-helix	containing	domain
FbpA	PF05833.6	gi|449066122|ref|YP_007433204.1|	-	0.022	13.2	0.0	0.026	13.1	0.0	1.1	1	0	0	1	1	1	0	Fibronectin-binding	protein	A	N-terminus	(FbpA)
S4	PF01479.20	gi|449066123|ref|YP_007433205.1|	-	2.5e-15	55.6	0.1	5.4e-15	54.5	0.1	1.6	1	0	0	1	1	1	1	S4	domain
Ribosomal_S4	PF00163.14	gi|449066123|ref|YP_007433205.1|	-	0.0034	17.7	0.7	0.0063	16.8	0.2	1.8	1	1	1	2	2	2	1	Ribosomal	protein	S4/S9	N-terminal	domain
Ribosomal_S11	PF00411.14	gi|449066124|ref|YP_007433206.1|	-	3.6e-44	149.4	0.4	4.1e-44	149.2	0.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S11
RNA_pol_A_bac	PF01000.21	gi|449066125|ref|YP_007433207.1|	-	4.4e-28	97.6	0.0	7.9e-28	96.8	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/RpoA	insert	domain
RNA_pol_L	PF01193.19	gi|449066125|ref|YP_007433207.1|	-	1.1e-10	40.4	0.0	1.4e-10	40.1	0.0	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
Fer4_9	PF13187.1	gi|449066125|ref|YP_007433207.1|	-	0.0001	22.4	9.7	0.0003	20.9	3.2	2.3	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|449066125|ref|YP_007433207.1|	-	0.0053	17.1	7.7	0.11	12.8	3.5	2.4	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|449066125|ref|YP_007433207.1|	-	0.056	13.2	11.4	0.055	13.2	3.9	2.6	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Yippee-Mis18	PF03226.9	gi|449066125|ref|YP_007433207.1|	-	0.24	11.4	4.2	0.15	12.1	0.7	2.0	2	0	0	2	2	2	0	Yippee	zinc-binding/DNA-binding	/Mis18,	centromere	assembly
Fer4_8	PF13183.1	gi|449066125|ref|YP_007433207.1|	-	0.38	10.8	7.2	2.1	8.4	0.1	2.9	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|449066125|ref|YP_007433207.1|	-	1.7	9.4	8.5	16	6.3	0.0	3.2	3	0	0	3	3	3	0	4Fe-4S	double	cluster	binding	domain
Fer4_6	PF12837.2	gi|449066125|ref|YP_007433207.1|	-	9.4	6.2	17.4	0.6	10.0	0.5	3.5	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Ribosomal_L18e	PF00828.14	gi|449066126|ref|YP_007433208.1|	-	8.7e-15	55.2	0.3	1.1e-14	54.9	0.2	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L18e/L15
Ribosomal_L13	PF00572.13	gi|449066127|ref|YP_007433209.1|	-	3.8e-28	98.1	0.2	4.7e-28	97.8	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L13
Ribosomal_S9	PF00380.14	gi|449066128|ref|YP_007433210.1|	-	2.1e-27	95.7	0.1	2.4e-27	95.5	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S9/S16
RNA_pol_N	PF01194.12	gi|449066129|ref|YP_007433211.1|	-	1.1e-30	105.4	0.5	1.2e-30	105.2	0.3	1.0	1	0	0	1	1	1	1	RNA	polymerases	N	/	8	kDa	subunit
Ribosomal_S2	PF00318.15	gi|449066130|ref|YP_007433212.1|	-	2.6e-41	141.1	0.0	1.2e-21	76.9	0.1	2.1	1	1	1	2	2	2	2	Ribosomal	protein	S2
Memo	PF01875.12	gi|449066131|ref|YP_007433213.1|	-	2.8e-87	292.0	0.0	3.3e-87	291.8	0.0	1.0	1	0	0	1	1	1	1	Memo-like	protein
LigB	PF02900.13	gi|449066131|ref|YP_007433213.1|	-	0.0052	15.8	0.0	0.015	14.3	0.0	1.8	1	1	0	1	1	1	1	Catalytic	LigB	subunit	of	aromatic	ring-opening	dioxygenase
FMN_dh	PF01070.13	gi|449066134|ref|YP_007433216.1|	-	1e-15	57.4	0.0	1.2e-15	57.2	0.0	1.2	1	0	0	1	1	1	1	FMN-dependent	dehydrogenase
IMPDH	PF00478.20	gi|449066134|ref|YP_007433216.1|	-	0.0042	16.0	0.1	0.33	9.7	0.1	2.2	2	0	0	2	2	2	2	IMP	dehydrogenase	/	GMP	reductase	domain
F_bP_aldolase	PF01116.15	gi|449066134|ref|YP_007433216.1|	-	0.11	11.5	0.0	0.42	9.6	0.0	1.8	2	0	0	2	2	2	0	Fructose-bisphosphate	aldolase	class-II
polyprenyl_synt	PF00348.12	gi|449066135|ref|YP_007433217.1|	-	4.8e-86	287.8	0.2	5.7e-86	287.5	0.2	1.1	1	0	0	1	1	1	1	Polyprenyl	synthetase
Glycos_transf_4	PF00953.16	gi|449066136|ref|YP_007433218.1|	-	5e-32	110.8	23.1	5e-32	110.8	16.0	2.4	3	0	0	3	3	3	1	Glycosyl	transferase	family	4
DUF3938	PF13074.1	gi|449066136|ref|YP_007433218.1|	-	0.02	14.7	6.6	0.25	11.1	1.8	2.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3938)
HAD_2	PF13419.1	gi|449066137|ref|YP_007433219.1|	-	1.4e-20	74.2	0.0	1.6e-20	74.0	0.0	1.0	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|449066137|ref|YP_007433219.1|	-	1.4e-14	55.0	0.0	3.8e-10	40.5	0.0	2.0	1	1	1	2	2	2	2	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.2	gi|449066137|ref|YP_007433219.1|	-	2.1e-09	37.8	0.0	2.9e-09	37.3	0.0	1.2	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|449066137|ref|YP_007433219.1|	-	6e-05	22.6	0.0	0.00023	20.7	0.0	2.0	2	0	0	2	2	2	1	HAD-hyrolase-like
Hydrolase_6	PF13344.1	gi|449066137|ref|YP_007433219.1|	-	8.5e-05	22.3	0.2	0.00076	19.3	0.1	2.1	1	1	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.7	gi|449066137|ref|YP_007433219.1|	-	0.00043	19.9	1.9	0.11	12.0	0.5	3.1	1	1	1	2	2	2	1	haloacid	dehalogenase-like	hydrolase
NIF	PF03031.13	gi|449066137|ref|YP_007433219.1|	-	0.021	14.5	0.1	0.052	13.2	0.0	1.6	1	1	0	1	1	1	0	NLI	interacting	factor-like	phosphatase
Phage_terminase	PF10668.4	gi|449066137|ref|YP_007433219.1|	-	0.18	11.5	1.1	0.38	10.5	0.8	1.6	1	0	0	1	1	1	0	Phage	terminase	small	subunit
COX1	PF00115.15	gi|449066138|ref|YP_007433220.1|	-	2.7e-59	200.9	60.0	2.7e-59	200.9	41.6	2.6	2	1	1	3	3	3	2	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
DUF2975	PF11188.3	gi|449066140|ref|YP_007433222.1|	-	0.094	12.4	4.4	0.17	11.6	2.2	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2975)
Cation_efflux	PF01545.16	gi|449066140|ref|YP_007433222.1|	-	0.4	9.7	2.6	0.37	9.8	1.8	1.0	1	0	0	1	1	1	0	Cation	efflux	family
DUF3955	PF13127.1	gi|449066140|ref|YP_007433222.1|	-	0.87	9.1	6.3	0.38	10.3	0.5	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3955)
DUF2905	PF11146.3	gi|449066140|ref|YP_007433222.1|	-	1.1	9.1	7.2	4.7	7.2	5.0	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2905)
DUF485	PF04341.7	gi|449066140|ref|YP_007433222.1|	-	1.3	8.8	4.6	0.49	10.1	1.4	1.6	1	1	1	2	2	2	0	Protein	of	unknown	function,	DUF485
RDD	PF06271.7	gi|449066140|ref|YP_007433222.1|	-	1.3	8.9	6.3	0.26	11.1	0.8	1.9	1	1	1	2	2	2	0	RDD	family
DUF3021	PF11457.3	gi|449066140|ref|YP_007433222.1|	-	4.2	7.2	7.2	22	4.9	5.0	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3021)
TatD_DNase	PF01026.16	gi|449066141|ref|YP_007433223.1|	-	8.7e-48	162.7	0.0	1e-47	162.5	0.0	1.0	1	0	0	1	1	1	1	TatD	related	DNase
Antitoxin-MazE	PF04014.13	gi|449066142|ref|YP_007433224.1|	-	1.1e-10	40.9	0.2	1.2e-10	40.8	0.1	1.1	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
eIF-1a	PF01176.14	gi|449066142|ref|YP_007433224.1|	-	0.00091	18.6	0.2	0.0012	18.1	0.1	1.3	1	1	0	1	1	1	1	Translation	initiation	factor	1A	/	IF-1
DUF1905	PF08922.6	gi|449066142|ref|YP_007433224.1|	-	0.067	12.7	0.1	0.093	12.3	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1905)
RE_HaeIII	PF09556.5	gi|449066142|ref|YP_007433224.1|	-	0.13	11.0	0.4	0.14	11.0	0.3	1.0	1	0	0	1	1	1	0	HaeIII	restriction	endonuclease
DUF4387	PF14330.1	gi|449066142|ref|YP_007433224.1|	-	0.14	12.5	0.2	0.15	12.4	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4387)
TrmB	PF01978.14	gi|449066143|ref|YP_007433225.1|	-	1.9e-15	56.3	0.2	2.5e-15	55.9	0.2	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|449066143|ref|YP_007433225.1|	-	8.1e-07	28.6	0.0	1.3e-06	27.9	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_5	PF01022.15	gi|449066143|ref|YP_007433225.1|	-	7.4e-06	25.5	0.7	2e-05	24.1	0.2	1.8	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
MarR	PF01047.17	gi|449066143|ref|YP_007433225.1|	-	5.5e-05	22.7	0.1	8.6e-05	22.1	0.1	1.3	1	0	0	1	1	1	1	MarR	family
TFIIE_alpha	PF02002.12	gi|449066143|ref|YP_007433225.1|	-	6.8e-05	22.3	0.4	0.00011	21.6	0.3	1.3	1	1	0	1	1	1	1	TFIIE	alpha	subunit
HTH_27	PF13463.1	gi|449066143|ref|YP_007433225.1|	-	0.00025	21.3	0.0	0.00038	20.7	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
z-alpha	PF02295.12	gi|449066143|ref|YP_007433225.1|	-	0.00078	19.1	0.6	0.0035	17.0	0.1	2.0	2	0	0	2	2	2	1	Adenosine	deaminase	z-alpha	domain
HTH_24	PF13412.1	gi|449066143|ref|YP_007433225.1|	-	0.0029	16.9	0.3	0.006	15.9	0.2	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_20	PF12840.2	gi|449066143|ref|YP_007433225.1|	-	0.0067	16.1	0.2	0.042	13.6	0.1	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_DeoR	PF08220.7	gi|449066143|ref|YP_007433225.1|	-	0.018	14.5	0.2	0.043	13.3	0.0	1.7	2	0	0	2	2	2	0	DeoR-like	helix-turn-helix	domain
DUF4423	PF14394.1	gi|449066143|ref|YP_007433225.1|	-	0.033	13.7	0.5	0.068	12.7	0.1	1.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4423)
DUF2250	PF10007.4	gi|449066143|ref|YP_007433225.1|	-	0.034	14.0	0.4	0.058	13.3	0.2	1.5	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Fe_dep_repress	PF01325.14	gi|449066143|ref|YP_007433225.1|	-	0.05	13.5	0.1	0.096	12.6	0.1	1.6	1	1	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_36	PF13730.1	gi|449066143|ref|YP_007433225.1|	-	0.11	12.7	0.3	0.24	11.5	0.2	1.8	1	1	0	1	1	1	0	Helix-turn-helix	domain
ATP_bind_4	PF01902.12	gi|449066144|ref|YP_007433226.1|	-	2e-58	197.3	0.4	2.2e-58	197.2	0.3	1.0	1	0	0	1	1	1	1	ATP-binding	region
QueC	PF06508.8	gi|449066144|ref|YP_007433226.1|	-	0.0047	16.2	0.0	0.064	12.5	0.0	2.3	2	1	0	3	3	3	1	Queuosine	biosynthesis	protein	QueC
DOT1	PF08123.8	gi|449066145|ref|YP_007433227.1|	-	1.5e-07	30.9	0.0	8.2e-07	28.5	0.0	1.8	2	0	0	2	2	2	1	Histone	methylation	protein	DOT1
Methyltransf_26	PF13659.1	gi|449066145|ref|YP_007433227.1|	-	0.00014	21.8	0.0	0.00021	21.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|449066145|ref|YP_007433227.1|	-	0.00059	18.9	0.0	0.00076	18.5	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_4	PF02390.12	gi|449066145|ref|YP_007433227.1|	-	0.0064	15.5	0.0	0.0082	15.2	0.0	1.2	1	0	0	1	1	1	1	Putative	methyltransferase
Methyltransf_31	PF13847.1	gi|449066145|ref|YP_007433227.1|	-	0.0081	15.7	0.1	0.012	15.1	0.1	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
N6_N4_Mtase	PF01555.13	gi|449066145|ref|YP_007433227.1|	-	0.013	15.0	0.0	0.024	14.1	0.0	1.4	2	0	0	2	2	2	0	DNA	methylase
MetW	PF07021.7	gi|449066145|ref|YP_007433227.1|	-	0.02	14.2	0.0	0.029	13.7	0.0	1.4	1	0	0	1	1	1	0	Methionine	biosynthesis	protein	MetW
Methyltransf_23	PF13489.1	gi|449066145|ref|YP_007433227.1|	-	0.024	14.3	0.0	0.03	14.0	0.0	1.3	1	1	0	1	1	1	0	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|449066145|ref|YP_007433227.1|	-	0.025	15.1	0.0	0.049	14.2	0.0	1.6	1	1	0	1	1	1	0	Methyltransferase	domain
FtsJ	PF01728.14	gi|449066145|ref|YP_007433227.1|	-	0.036	14.0	0.0	0.044	13.7	0.0	1.2	1	0	0	1	1	1	0	FtsJ-like	methyltransferase
PrmA	PF06325.8	gi|449066145|ref|YP_007433227.1|	-	0.074	12.1	0.0	0.09	11.8	0.0	1.1	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
MTS	PF05175.9	gi|449066145|ref|YP_007433227.1|	-	0.099	12.0	0.0	0.13	11.5	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	small	domain
Methyltransf_11	PF08241.7	gi|449066145|ref|YP_007433227.1|	-	0.11	12.9	0.0	0.3	11.6	0.0	1.7	2	0	0	2	2	2	0	Methyltransferase	domain
NTP_transf_3	PF12804.2	gi|449066146|ref|YP_007433228.1|	-	8.8e-17	61.6	0.0	1.4e-16	61.0	0.0	1.3	1	1	0	1	1	1	1	MobA-like	NTP	transferase	domain
MoeA_N	PF03453.12	gi|449066147|ref|YP_007433229.1|	-	4.1e-42	143.2	0.0	7.9e-42	142.3	0.0	1.5	1	0	0	1	1	1	1	MoeA	N-terminal	region	(domain	I	and	II)
MoCF_biosynth	PF00994.19	gi|449066147|ref|YP_007433229.1|	-	9.4e-22	76.9	0.0	1.8e-21	76.0	0.0	1.5	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
7TMR-HDED	PF07697.6	gi|449066147|ref|YP_007433229.1|	-	0.017	14.8	0.3	0.017	14.8	0.2	1.9	2	0	0	2	2	2	0	7TM-HD	extracellular
MobB	PF03205.9	gi|449066148|ref|YP_007433230.1|	-	1.7e-24	86.1	0.0	2.2e-24	85.7	0.0	1.2	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Miro	PF08477.8	gi|449066148|ref|YP_007433230.1|	-	0.02	15.3	0.1	0.034	14.6	0.0	1.4	1	0	0	1	1	1	0	Miro-like	protein
Arch_ATPase	PF01637.13	gi|449066148|ref|YP_007433230.1|	-	0.06	13.0	0.0	0.062	12.9	0.0	1.3	1	1	0	1	1	1	0	Archaeal	ATPase
Methyltransf_11	PF08241.7	gi|449066149|ref|YP_007433231.1|	-	2.7e-16	59.8	0.0	4e-16	59.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|449066149|ref|YP_007433231.1|	-	4.3e-10	39.5	0.0	7.8e-10	38.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|449066149|ref|YP_007433231.1|	-	2e-09	36.9	0.1	1.6e-08	34.0	0.0	2.1	1	1	1	2	2	2	1	ubiE/COQ5	methyltransferase	family
Methyltransf_12	PF08242.7	gi|449066149|ref|YP_007433231.1|	-	4.1e-08	33.6	0.0	7.6e-08	32.7	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|449066149|ref|YP_007433231.1|	-	5.8e-08	32.4	0.0	8.5e-08	31.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|449066149|ref|YP_007433231.1|	-	3.2e-07	30.6	0.0	5.3e-07	29.9	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|449066149|ref|YP_007433231.1|	-	7.9e-05	23.2	0.0	0.00015	22.3	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
DREV	PF05219.7	gi|449066149|ref|YP_007433231.1|	-	0.00088	18.2	0.0	0.0012	17.7	0.0	1.3	1	1	0	1	1	1	1	DREV	methyltransferase
Methyltransf_8	PF05148.10	gi|449066149|ref|YP_007433231.1|	-	0.0019	17.8	0.0	0.0026	17.4	0.0	1.2	1	0	0	1	1	1	1	Hypothetical	methyltransferase
Methyltransf_26	PF13659.1	gi|449066149|ref|YP_007433231.1|	-	0.042	13.8	0.0	0.29	11.1	0.0	2.0	1	1	0	1	1	1	0	Methyltransferase	domain
DUF4015	PF13200.1	gi|449066151|ref|YP_007433233.1|	-	0.0055	15.6	0.1	0.0071	15.2	0.1	1.1	1	0	0	1	1	1	1	Putative	glycosyl	hydrolase	domain
Bacteriocin_IIc	PF10439.4	gi|449066151|ref|YP_007433233.1|	-	0.33	11.1	7.1	0.55	10.3	5.0	1.3	1	0	0	1	1	1	0	Bacteriocin	class	II	with	double-glycine	leader	peptide
Gly-zipper_OmpA	PF13436.1	gi|449066151|ref|YP_007433233.1|	-	1.5	8.4	3.7	2.1	8.0	2.5	1.2	1	0	0	1	1	1	0	Glycine-zipper	containing	OmpA-like	membrane	domain
FlaC_arch	PF05377.6	gi|449066152|ref|YP_007433234.1|	-	0.11	12.3	0.1	0.24	11.3	0.1	1.6	1	0	0	1	1	1	0	Flagella	accessory	protein	C	(FlaC)
Fe_dep_repr_C	PF02742.10	gi|449066153|ref|YP_007433235.1|	-	1.1e-28	98.7	1.6	1.5e-28	98.2	0.3	1.8	2	0	0	2	2	2	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
Fe_dep_repress	PF01325.14	gi|449066153|ref|YP_007433235.1|	-	3.4e-12	46.1	0.1	1.2e-11	44.3	0.0	1.9	2	0	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_45	PF14947.1	gi|449066153|ref|YP_007433235.1|	-	5.9e-09	35.6	0.3	1.2e-08	34.6	0.2	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_27	PF13463.1	gi|449066153|ref|YP_007433235.1|	-	2e-07	31.1	0.0	4.6e-07	30.0	0.0	1.6	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_5	PF01022.15	gi|449066153|ref|YP_007433235.1|	-	1.3e-06	27.9	0.0	2.3e-06	27.1	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
MarR	PF01047.17	gi|449066153|ref|YP_007433235.1|	-	3.1e-06	26.7	0.0	7.8e-06	25.4	0.0	1.7	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.2	gi|449066153|ref|YP_007433235.1|	-	7.1e-06	25.5	0.1	1.9e-05	24.2	0.0	1.7	2	0	0	2	2	1	1	MarR	family
HTH_24	PF13412.1	gi|449066153|ref|YP_007433235.1|	-	8.3e-06	25.0	0.2	2.8e-05	23.3	0.0	2.1	2	0	0	2	2	1	1	Winged	helix-turn-helix	DNA-binding
HTH_DeoR	PF08220.7	gi|449066153|ref|YP_007433235.1|	-	1.9e-05	24.0	0.1	5.8e-05	22.5	0.0	1.8	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
FeoA	PF04023.9	gi|449066153|ref|YP_007433235.1|	-	3.1e-05	23.8	0.4	9e-05	22.3	0.1	1.8	2	0	0	2	2	2	1	FeoA	domain
HemN_C	PF06969.11	gi|449066153|ref|YP_007433235.1|	-	0.00018	21.5	0.2	0.00046	20.1	0.0	1.8	2	0	0	2	2	1	1	HemN	C-terminal	domain
HTH_41	PF14502.1	gi|449066153|ref|YP_007433235.1|	-	0.00025	20.5	0.0	0.00094	18.7	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
DUF4423	PF14394.1	gi|449066153|ref|YP_007433235.1|	-	0.00035	20.1	0.1	0.00073	19.1	0.0	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
TrmB	PF01978.14	gi|449066153|ref|YP_007433235.1|	-	0.00037	20.1	0.1	0.00078	19.0	0.0	1.6	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_1	PF00126.22	gi|449066153|ref|YP_007433235.1|	-	0.0025	17.5	0.1	0.0074	16.0	0.0	1.9	1	1	0	1	1	1	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
HTH_36	PF13730.1	gi|449066153|ref|YP_007433235.1|	-	0.0028	17.7	0.0	0.0049	16.9	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
GntR	PF00392.16	gi|449066153|ref|YP_007433235.1|	-	0.0029	17.0	0.0	0.025	14.0	0.0	2.6	3	0	0	3	3	3	1	Bacterial	regulatory	proteins,	gntR	family
HTH_Crp_2	PF13545.1	gi|449066153|ref|YP_007433235.1|	-	0.0034	17.1	0.0	0.0095	15.7	0.0	1.7	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
FeoC	PF09012.5	gi|449066153|ref|YP_007433235.1|	-	0.0041	16.8	0.0	0.01	15.5	0.0	1.7	1	1	0	1	1	1	1	FeoC	like	transcriptional	regulator
Rrf2	PF02082.15	gi|449066153|ref|YP_007433235.1|	-	0.007	16.4	0.0	0.029	14.5	0.0	2.0	2	0	0	2	2	1	1	Transcriptional	regulator
HTH_34	PF13601.1	gi|449066153|ref|YP_007433235.1|	-	0.0079	16.1	0.1	0.035	14.1	0.1	2.1	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
PadR	PF03551.9	gi|449066153|ref|YP_007433235.1|	-	0.011	15.4	0.1	0.11	12.2	0.0	2.5	2	1	1	3	3	3	0	Transcriptional	regulator	PadR-like	family
B-block_TFIIIC	PF04182.7	gi|449066153|ref|YP_007433235.1|	-	0.012	15.4	1.0	0.096	12.5	0.0	2.5	2	1	0	2	2	2	0	B-block	binding	subunit	of	TFIIIC
HTH_28	PF13518.1	gi|449066153|ref|YP_007433235.1|	-	0.019	14.9	0.0	0.059	13.3	0.0	1.8	2	0	0	2	2	2	0	Helix-turn-helix	domain
AAA_assoc_C	PF09821.4	gi|449066153|ref|YP_007433235.1|	-	0.019	15.2	0.0	0.033	14.4	0.0	1.4	1	0	0	1	1	1	0	C-terminal	AAA-associated	domain
Ribosomal_S19e	PF01090.14	gi|449066153|ref|YP_007433235.1|	-	0.024	14.0	0.0	0.038	13.4	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	protein	S19e
DUF2250	PF10007.4	gi|449066153|ref|YP_007433235.1|	-	0.025	14.4	0.2	0.048	13.5	0.2	1.5	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF4364	PF14277.1	gi|449066153|ref|YP_007433235.1|	-	0.029	13.9	0.1	0.081	12.5	0.1	1.8	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4364)
FokI_C	PF02980.11	gi|449066153|ref|YP_007433235.1|	-	0.03	13.9	0.0	0.053	13.1	0.0	1.4	1	0	0	1	1	1	0	Restriction	endonuclease	FokI,	catalytic	domain
HTH_20	PF12840.2	gi|449066153|ref|YP_007433235.1|	-	0.037	13.8	0.0	0.091	12.5	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
HxlR	PF01638.12	gi|449066153|ref|YP_007433235.1|	-	0.038	13.6	0.1	0.17	11.5	0.0	2.2	1	1	1	2	2	2	0	HxlR-like	helix-turn-helix
HTH_11	PF08279.7	gi|449066153|ref|YP_007433235.1|	-	0.054	13.1	0.5	0.22	11.1	0.0	2.3	2	0	0	2	2	2	0	HTH	domain
DUF1221	PF06760.6	gi|449066153|ref|YP_007433235.1|	-	0.056	12.6	0.0	0.1	11.8	0.0	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1221)
DUF4393	PF14337.1	gi|449066153|ref|YP_007433235.1|	-	0.058	12.8	0.2	0.25	10.7	0.1	2.0	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4393)
HTH_IclR	PF09339.5	gi|449066153|ref|YP_007433235.1|	-	0.082	12.5	0.0	0.21	11.1	0.0	1.7	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
Topoisom_bac	PF01131.15	gi|449066153|ref|YP_007433235.1|	-	0.099	11.4	0.0	0.17	10.6	0.0	1.3	1	0	0	1	1	1	0	DNA	topoisomerase
HrcA_DNA-bdg	PF03444.10	gi|449066153|ref|YP_007433235.1|	-	0.11	11.9	0.1	0.3	10.5	0.0	1.8	2	0	0	2	2	1	0	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
DUF4147	PF13660.1	gi|449066154|ref|YP_007433236.1|	-	1.9e-49	167.9	0.0	2.7e-49	167.4	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4147)
MOFRL	PF05161.8	gi|449066154|ref|YP_007433236.1|	-	5.3e-23	81.1	0.3	1.3e-22	79.9	0.2	1.7	1	0	0	1	1	1	1	MOFRL	family
BPD_transp_1	PF00528.17	gi|449066156|ref|YP_007433238.1|	-	1.4e-13	50.7	13.2	1.4e-13	50.7	9.2	2.2	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
TIM	PF00121.13	gi|449066158|ref|YP_007433240.1|	-	1.4e-25	89.7	0.5	2.4e-19	69.3	0.0	2.1	2	0	0	2	2	2	2	Triosephosphate	isomerase
ThiG	PF05690.9	gi|449066158|ref|YP_007433240.1|	-	1e-06	28.0	0.5	1.7e-06	27.3	0.3	1.3	1	0	0	1	1	1	1	Thiazole	biosynthesis	protein	ThiG
Glu_synthase	PF01645.12	gi|449066158|ref|YP_007433240.1|	-	9.8e-06	24.7	0.5	1.6e-05	24.0	0.1	1.4	2	0	0	2	2	2	1	Conserved	region	in	glutamate	synthase
FMN_dh	PF01070.13	gi|449066158|ref|YP_007433240.1|	-	2.4e-05	23.3	0.1	3.7e-05	22.7	0.1	1.2	1	0	0	1	1	1	1	FMN-dependent	dehydrogenase
His_biosynth	PF00977.16	gi|449066158|ref|YP_007433240.1|	-	0.00012	21.4	0.8	0.0039	16.4	0.1	2.1	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
Trp_syntA	PF00290.15	gi|449066158|ref|YP_007433240.1|	-	0.00019	20.0	0.4	0.00019	20.0	0.3	1.5	2	0	0	2	2	2	1	Tryptophan	synthase	alpha	chain
PcrB	PF01884.12	gi|449066158|ref|YP_007433240.1|	-	0.0015	17.8	1.5	0.0031	16.8	1.1	1.5	1	0	0	1	1	1	1	PcrB	family
NMO	PF03060.10	gi|449066158|ref|YP_007433240.1|	-	0.0021	17.2	0.5	0.0038	16.4	0.3	1.4	1	0	0	1	1	1	1	Nitronate	monooxygenase
IGPS	PF00218.16	gi|449066158|ref|YP_007433240.1|	-	0.008	15.2	0.0	0.013	14.5	0.0	1.3	1	0	0	1	1	1	1	Indole-3-glycerol	phosphate	synthase
DHO_dh	PF01180.16	gi|449066158|ref|YP_007433240.1|	-	0.023	13.6	0.5	0.041	12.8	0.1	1.6	2	0	0	2	2	2	0	Dihydroorotate	dehydrogenase
IMPDH	PF00478.20	gi|449066158|ref|YP_007433240.1|	-	0.024	13.5	1.9	0.035	12.9	0.3	1.8	2	0	0	2	2	2	0	IMP	dehydrogenase	/	GMP	reductase	domain
DUF561	PF04481.7	gi|449066158|ref|YP_007433240.1|	-	0.031	13.2	0.0	0.065	12.1	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF561)
NanE	PF04131.9	gi|449066158|ref|YP_007433240.1|	-	0.044	12.7	0.2	0.1	11.5	0.0	1.6	2	0	0	2	2	2	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
DUF429	PF04250.8	gi|449066159|ref|YP_007433241.1|	-	2.1e-30	105.5	0.0	2.2e-29	102.2	0.0	1.9	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF429)
Na_H_Exchanger	PF00999.16	gi|449066160|ref|YP_007433242.1|	-	5.9e-28	97.4	40.7	5.9e-28	97.4	28.2	2.4	2	1	0	2	2	2	1	Sodium/hydrogen	exchanger	family
Esterase	PF00756.15	gi|449066161|ref|YP_007433243.1|	-	3.2e-13	49.7	0.0	7.8e-13	48.4	0.0	1.7	1	1	0	1	1	1	1	Putative	esterase
Abhydrolase_5	PF12695.2	gi|449066161|ref|YP_007433243.1|	-	0.0043	16.8	0.0	0.0051	16.5	0.0	1.3	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_6	PF12697.2	gi|449066161|ref|YP_007433243.1|	-	0.033	14.0	0.0	0.042	13.7	0.0	1.2	1	0	0	1	1	1	0	Alpha/beta	hydrolase	family
Esterase_phd	PF10503.4	gi|449066161|ref|YP_007433243.1|	-	0.099	11.8	0.0	0.14	11.3	0.0	1.2	1	0	0	1	1	1	0	Esterase	PHB	depolymerase
NUDIX	PF00293.23	gi|449066162|ref|YP_007433244.1|	-	3e-10	39.8	0.1	3.7e-10	39.5	0.1	1.1	1	0	0	1	1	1	1	NUDIX	domain
Lyase_1	PF00206.15	gi|449066163|ref|YP_007433245.1|	-	2.4e-101	339.0	0.0	3e-101	338.7	0.0	1.1	1	0	0	1	1	1	1	Lyase
FumaraseC_C	PF10415.4	gi|449066163|ref|YP_007433245.1|	-	3.5e-14	52.5	1.2	6.9e-14	51.6	0.0	2.2	3	0	0	3	3	3	1	Fumarase	C	C-terminus
RuvA_C	PF07499.8	gi|449066163|ref|YP_007433245.1|	-	0.032	14.3	0.0	0.63	10.2	0.0	2.9	3	0	0	3	3	3	0	RuvA,	C-terminal	domain
P4Ha_N	PF08336.6	gi|449066163|ref|YP_007433245.1|	-	0.13	12.1	0.2	5.3	6.8	0.0	2.5	1	1	1	2	2	2	0	Prolyl	4-Hydroxylase	alpha-subunit,	N-terminal	region
Lactamase_B	PF00753.22	gi|449066164|ref|YP_007433246.1|	-	9.1e-29	100.4	0.6	1e-28	100.3	0.4	1.0	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|449066164|ref|YP_007433246.1|	-	2.4e-08	33.7	0.0	2.8e-08	33.5	0.0	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|449066164|ref|YP_007433246.1|	-	0.022	14.4	0.1	0.026	14.2	0.0	1.3	1	1	0	1	1	1	0	Beta-lactamase	superfamily	domain
DUF1246	PF06849.7	gi|449066164|ref|YP_007433246.1|	-	0.14	11.9	0.0	0.23	11.2	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1246)
Glyco_tranf_2_3	PF13641.1	gi|449066165|ref|YP_007433247.1|	-	5.7e-20	72.0	0.0	7.5e-20	71.7	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glycos_transf_2	PF00535.21	gi|449066165|ref|YP_007433247.1|	-	4.1e-18	65.6	0.1	6.6e-18	64.9	0.1	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.1	gi|449066165|ref|YP_007433247.1|	-	4.3e-13	48.9	0.0	8.4e-13	47.9	0.0	1.4	1	1	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_trans_2_3	PF13632.1	gi|449066165|ref|YP_007433247.1|	-	1.5e-12	47.6	0.2	2.3e-12	47.0	0.1	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_tranf_2_2	PF10111.4	gi|449066165|ref|YP_007433247.1|	-	0.041	12.9	0.0	0.065	12.3	0.0	1.2	1	0	0	1	1	1	0	Glycosyltransferase	like	family	2
Chitin_synth_2	PF03142.10	gi|449066165|ref|YP_007433247.1|	-	0.056	11.8	2.3	1.6	7.0	1.8	2.9	2	1	0	2	2	2	0	Chitin	synthase
MMPL	PF03176.10	gi|449066166|ref|YP_007433248.1|	-	3.6e-50	170.5	25.4	1.5e-28	99.5	7.5	2.2	2	0	0	2	2	2	2	MMPL	family
Helicase_RecD	PF05127.9	gi|449066167|ref|YP_007433249.1|	-	9.4e-48	162.1	0.0	1.5e-47	161.5	0.0	1.3	1	0	0	1	1	1	1	Helicase
GNAT_acetyltr_2	PF13718.1	gi|449066167|ref|YP_007433249.1|	-	9.7e-39	132.7	0.0	8.1e-38	129.7	0.0	2.1	1	1	0	1	1	1	1	GNAT	acetyltransferase	2
DUF1726	PF08351.6	gi|449066167|ref|YP_007433249.1|	-	1.1e-21	76.2	0.0	2.6e-21	75.1	0.0	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1726)
Acetyltransf_7	PF13508.1	gi|449066167|ref|YP_007433249.1|	-	6.1e-08	32.7	0.0	1.9e-07	31.1	0.0	1.9	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.19	gi|449066167|ref|YP_007433249.1|	-	7.1e-08	32.3	0.1	2.1e-07	30.8	0.0	1.8	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	family
tRNA_bind_2	PF13725.1	gi|449066167|ref|YP_007433249.1|	-	6.2e-07	29.4	0.1	8e-06	25.8	0.0	2.3	1	1	1	2	2	2	1	Possible	tRNA	binding	domain
AAA_22	PF13401.1	gi|449066167|ref|YP_007433249.1|	-	0.0003	20.9	0.9	0.0065	16.6	0.0	3.3	2	2	2	4	4	4	1	AAA	domain
AAA_30	PF13604.1	gi|449066167|ref|YP_007433249.1|	-	0.012	15.2	0.0	0.062	12.8	0.0	2.2	1	1	1	2	2	2	0	AAA	domain
FR47	PF08445.5	gi|449066167|ref|YP_007433249.1|	-	0.051	13.3	0.0	0.15	11.8	0.0	1.7	1	0	0	1	1	1	0	FR47-like	protein
Acetyltransf_CG	PF14542.1	gi|449066167|ref|YP_007433249.1|	-	0.081	12.8	0.0	1.2	9.0	0.0	2.4	2	0	0	2	2	2	0	GCN5-related	N-acetyl-transferase
HCNGP	PF07818.8	gi|449066167|ref|YP_007433249.1|	-	0.088	12.8	0.1	0.29	11.1	0.1	1.8	1	0	0	1	1	1	0	HCNGP-like	protein
DUF95	PF01944.12	gi|449066168|ref|YP_007433250.1|	-	1.9e-13	50.4	14.4	1.9e-13	50.4	10.0	2.3	2	1	0	2	2	2	1	Integral	membrane	protein	DUF95
UPF0147	PF03685.8	gi|449066168|ref|YP_007433250.1|	-	0.16	11.8	0.1	0.36	10.7	0.1	1.6	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0147)
Exo_endo_phos	PF03372.18	gi|449066169|ref|YP_007433251.1|	-	5.8e-15	55.9	0.0	6.8e-15	55.6	0.0	1.1	1	0	0	1	1	1	1	Endonuclease/Exonuclease/phosphatase	family
Exo_endo_phos_2	PF14529.1	gi|449066169|ref|YP_007433251.1|	-	1.4e-10	40.8	0.0	2.1e-10	40.2	0.0	1.3	1	0	0	1	1	1	1	Endonuclease-reverse	transcriptase
TusA	PF01206.12	gi|449066170|ref|YP_007433252.1|	-	1.6e-14	53.2	0.4	1.9e-14	52.9	0.3	1.1	1	0	0	1	1	1	1	Sulfurtransferase	TusA
PurS	PF02700.9	gi|449066170|ref|YP_007433252.1|	-	0.043	13.7	0.1	0.059	13.3	0.0	1.2	1	0	0	1	1	1	0	Phosphoribosylformylglycinamidine	(FGAM)	synthase
Bac_small_YrzI	PF09501.5	gi|449066170|ref|YP_007433252.1|	-	0.053	13.4	0.7	0.089	12.7	0.5	1.3	1	0	0	1	1	1	0	Probable	sporulation	protein	(Bac_small_yrzI)
DUF1641	PF07849.6	gi|449066171|ref|YP_007433253.1|	-	6.9e-12	44.7	0.4	2e-11	43.2	0.0	2.0	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1641)
MgtE_N	PF03448.12	gi|449066171|ref|YP_007433253.1|	-	0.046	14.0	16.0	0.42	10.9	1.4	4.2	1	1	1	3	3	3	0	MgtE	intracellular	N	domain
GED	PF02212.13	gi|449066171|ref|YP_007433253.1|	-	0.081	12.8	5.4	5.6	6.9	0.5	2.9	2	1	0	2	2	2	0	Dynamin	GTPase	effector	domain
DUF1542	PF07564.6	gi|449066171|ref|YP_007433253.1|	-	0.091	12.7	1.7	0.94	9.5	0.2	2.5	2	0	0	2	2	2	0	Domain	of	Unknown	Function	(DUF1542)
AAA_13	PF13166.1	gi|449066171|ref|YP_007433253.1|	-	0.39	9.1	5.4	0.22	9.9	1.8	1.9	1	1	0	1	1	1	0	AAA	domain
FliT	PF05400.8	gi|449066171|ref|YP_007433253.1|	-	0.4	11.1	3.5	8.5	6.8	0.2	3.4	2	2	1	3	3	3	0	Flagellar	protein	FliT
DUF4511	PF14974.1	gi|449066171|ref|YP_007433253.1|	-	0.43	10.3	8.9	2	8.1	0.1	4.2	2	2	2	4	4	4	0	Domain	of	unknown	function	(DUF4511)
DUF3571	PF12095.3	gi|449066171|ref|YP_007433253.1|	-	7.7	6.8	7.9	21	5.4	0.3	3.3	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3571)
DUF2785	PF10978.3	gi|449066172|ref|YP_007433254.1|	-	0.015	14.7	1.0	3.8	6.9	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2785)
DUF2654	PF10849.3	gi|449066172|ref|YP_007433254.1|	-	0.098	12.4	0.1	0.18	11.5	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2654)
TrmB	PF01978.14	gi|449066173|ref|YP_007433255.1|	-	2.6e-13	49.4	0.0	3.6e-13	49.0	0.0	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|449066173|ref|YP_007433255.1|	-	1.5e-10	40.6	0.0	2.4e-10	39.9	0.0	1.4	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.17	gi|449066173|ref|YP_007433255.1|	-	9.7e-08	31.6	0.0	1.5e-07	31.0	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.1	gi|449066173|ref|YP_007433255.1|	-	8.3e-07	28.3	0.0	1.5e-06	27.5	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_27	PF13463.1	gi|449066173|ref|YP_007433255.1|	-	2.7e-05	24.4	0.0	4.2e-05	23.7	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
TFIIE_alpha	PF02002.12	gi|449066173|ref|YP_007433255.1|	-	5.2e-05	22.6	0.0	6.4e-05	22.4	0.0	1.2	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HTH_34	PF13601.1	gi|449066173|ref|YP_007433255.1|	-	6.8e-05	22.8	0.0	0.0001	22.2	0.0	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_IclR	PF09339.5	gi|449066173|ref|YP_007433255.1|	-	9e-05	21.9	0.0	0.00015	21.2	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
Mga	PF05043.8	gi|449066173|ref|YP_007433255.1|	-	0.00066	19.9	0.0	0.0014	18.8	0.0	1.5	1	1	0	1	1	1	1	Mga	helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|449066173|ref|YP_007433255.1|	-	0.0014	18.5	0.0	0.0022	17.8	0.0	1.4	1	1	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_5	PF01022.15	gi|449066173|ref|YP_007433255.1|	-	0.0026	17.4	0.0	0.0042	16.7	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_36	PF13730.1	gi|449066173|ref|YP_007433255.1|	-	0.0031	17.5	0.0	0.0049	16.9	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
DUF4423	PF14394.1	gi|449066173|ref|YP_007433255.1|	-	0.0043	16.6	0.0	0.0055	16.2	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
GntR	PF00392.16	gi|449066173|ref|YP_007433255.1|	-	0.0072	15.7	0.0	0.024	14.0	0.0	1.8	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	gntR	family
HTH_20	PF12840.2	gi|449066173|ref|YP_007433255.1|	-	0.0076	16.0	0.0	0.011	15.5	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|449066173|ref|YP_007433255.1|	-	0.011	15.3	0.0	0.021	14.4	0.0	1.4	1	0	0	1	1	1	0	HTH	domain
RPA_C	PF08784.6	gi|449066173|ref|YP_007433255.1|	-	0.028	14.8	0.0	0.04	14.3	0.0	1.2	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
RP-C	PF03428.8	gi|449066173|ref|YP_007433255.1|	-	0.04	13.3	0.1	1.6	8.1	0.0	2.1	1	1	0	1	1	1	0	Replication	protein	C	N-terminal	domain
KLRAQ	PF10205.4	gi|449066173|ref|YP_007433255.1|	-	0.044	13.8	0.2	0.065	13.2	0.1	1.2	1	0	0	1	1	1	0	Predicted	coiled-coil	domain-containing	protein
HTH_Crp_2	PF13545.1	gi|449066173|ref|YP_007433255.1|	-	0.085	12.6	0.0	0.14	11.9	0.0	1.4	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
Epimerase	PF01370.16	gi|449066174|ref|YP_007433256.1|	-	1.7e-10	40.7	0.1	2.5e-10	40.1	0.0	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|449066174|ref|YP_007433256.1|	-	1.1e-09	37.5	0.0	1.4e-09	37.2	0.0	1.2	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Saccharop_dh	PF03435.13	gi|449066174|ref|YP_007433256.1|	-	1.5e-07	30.7	0.0	2.8e-07	29.8	0.0	1.4	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
ThiF	PF00899.16	gi|449066174|ref|YP_007433256.1|	-	0.0084	15.9	0.0	0.051	13.3	0.0	2.1	2	0	0	2	2	2	1	ThiF	family
UN_NPL4	PF11543.3	gi|449066174|ref|YP_007433256.1|	-	0.044	14.0	0.1	0.089	13.0	0.1	1.5	1	0	0	1	1	1	0	Nuclear	pore	localisation	protein	NPL4
Aldo_ket_red	PF00248.16	gi|449066175|ref|YP_007433257.1|	-	2.4e-70	236.5	0.1	2.7e-70	236.3	0.0	1.0	1	0	0	1	1	1	1	Aldo/keto	reductase	family
Pyr_redox_2	PF07992.9	gi|449066176|ref|YP_007433258.1|	-	1.4e-28	100.1	8.4	1.3e-27	97.0	5.8	3.6	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|449066176|ref|YP_007433258.1|	-	2.7e-21	75.7	5.1	5.8e-14	52.2	0.1	3.9	5	0	0	5	5	5	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|449066176|ref|YP_007433258.1|	-	2.4e-15	56.5	0.1	6.2e-15	55.1	0.0	1.8	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
GIDA	PF01134.17	gi|449066176|ref|YP_007433258.1|	-	3.4e-13	49.2	6.6	5.5e-06	25.4	1.2	4.0	3	1	0	3	3	3	3	Glucose	inhibited	division	protein	A
FAD_binding_2	PF00890.19	gi|449066176|ref|YP_007433258.1|	-	1.2e-10	40.8	7.6	5.9e-07	28.6	0.1	3.4	4	0	0	4	4	4	3	FAD	binding	domain
NAD_binding_8	PF13450.1	gi|449066176|ref|YP_007433258.1|	-	1.8e-10	40.6	2.6	6e-06	26.1	0.1	2.9	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.9	gi|449066176|ref|YP_007433258.1|	-	7.2e-09	34.5	1.5	1.3e-06	27.2	0.0	3.4	3	0	0	3	3	3	1	HI0933-like	protein
Pyr_redox_3	PF13738.1	gi|449066176|ref|YP_007433258.1|	-	6.9e-08	32.8	0.1	2.9e-06	27.5	0.1	3.0	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_oxidored	PF12831.2	gi|449066176|ref|YP_007433258.1|	-	7.3e-07	28.6	1.3	1.5e-06	27.6	0.0	1.9	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
FAD_binding_3	PF01494.14	gi|449066176|ref|YP_007433258.1|	-	2.3e-06	26.9	1.0	0.03	13.3	0.1	2.3	2	0	0	2	2	2	2	FAD	binding	domain
DAO	PF01266.19	gi|449066176|ref|YP_007433258.1|	-	3.7e-06	26.0	5.1	0.0065	15.4	0.1	3.6	4	0	0	4	4	4	2	FAD	dependent	oxidoreductase
AlaDh_PNT_C	PF01262.16	gi|449066176|ref|YP_007433258.1|	-	0.0009	18.8	0.1	0.44	10.1	0.0	3.1	3	0	0	3	3	3	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
Thi4	PF01946.12	gi|449066176|ref|YP_007433258.1|	-	0.0035	16.4	0.2	0.049	12.7	0.0	2.4	2	0	0	2	2	2	1	Thi4	family
Amino_oxidase	PF01593.19	gi|449066176|ref|YP_007433258.1|	-	0.0045	16.1	0.0	1.2	8.1	0.0	3.1	3	0	0	3	3	3	1	Flavin	containing	amine	oxidoreductase
Trp_halogenase	PF04820.9	gi|449066176|ref|YP_007433258.1|	-	0.014	14.0	0.4	0.34	9.4	0.0	2.2	2	0	0	2	2	2	0	Tryptophan	halogenase
Lycopene_cycl	PF05834.7	gi|449066176|ref|YP_007433258.1|	-	0.025	13.5	1.0	0.54	9.1	0.0	2.8	2	1	1	3	3	3	0	Lycopene	cyclase	protein
UDPG_MGDP_dh_N	PF03721.9	gi|449066176|ref|YP_007433258.1|	-	0.026	13.9	3.2	0.27	10.6	0.0	3.4	4	0	0	4	4	4	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
ThiC	PF01964.13	gi|449066177|ref|YP_007433259.1|	-	1.5e-170	567.3	0.0	1.7e-170	567.0	0.0	1.0	1	0	0	1	1	1	1	ThiC	family
GTP_EFTU_D2	PF03144.20	gi|449066178|ref|YP_007433260.1|	-	0.0011	19.0	0.3	0.027	14.5	0.2	2.6	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
Arc_PepC_II	PF06847.6	gi|449066179|ref|YP_007433261.1|	-	1.8e-16	60.2	0.0	1.8e-16	60.2	0.0	1.9	2	0	0	2	2	2	1	Archaeal	Peptidase	A24	C-terminus	Type	II
Peptidase_A24	PF01478.13	gi|449066179|ref|YP_007433261.1|	-	1.9e-07	31.1	6.5	1.9e-07	31.1	4.5	2.1	2	1	0	2	2	2	1	Type	IV	leader	peptidase	family
DUF973	PF06157.6	gi|449066180|ref|YP_007433262.1|	-	9.5e-54	182.2	27.8	2.3e-52	177.7	19.3	2.0	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
Creatininase	PF02633.9	gi|449066181|ref|YP_007433263.1|	-	1.9e-47	161.3	0.0	2.2e-47	161.1	0.0	1.0	1	0	0	1	1	1	1	Creatinine	amidohydrolase
DUF2101	PF09874.4	gi|449066181|ref|YP_007433263.1|	-	0.015	14.7	0.6	0.023	14.1	0.4	1.3	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2101)
CitMHS	PF03600.11	gi|449066182|ref|YP_007433264.1|	-	3.1e-12	45.7	15.0	7.4e-09	34.6	6.3	2.0	1	1	1	2	2	2	2	Citrate	transporter
Ecm33	PF12454.3	gi|449066182|ref|YP_007433264.1|	-	0.1	12.4	0.2	0.27	11.1	0.2	1.7	1	0	0	1	1	1	0	GPI-anchored	cell	wall	organization	protein
CitMHS	PF03600.11	gi|449066183|ref|YP_007433265.1|	-	6.6e-20	70.9	18.9	8.2e-20	70.6	13.1	1.1	1	0	0	1	1	1	1	Citrate	transporter
DcuA_DcuB	PF03605.9	gi|449066183|ref|YP_007433265.1|	-	8.3e-05	21.5	2.0	0.00013	20.9	1.4	1.4	1	1	0	1	1	1	1	Anaerobic	c4-dicarboxylate	membrane	transporter
MFS_1	PF07690.11	gi|449066184|ref|YP_007433266.1|	-	3.5e-19	68.7	29.1	1.3e-12	47.1	11.7	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
4HBT	PF03061.17	gi|449066185|ref|YP_007433267.1|	-	3.7e-21	75.0	0.1	1.9e-10	40.6	0.0	2.2	2	0	0	2	2	2	2	Thioesterase	superfamily
4HBT_2	PF13279.1	gi|449066185|ref|YP_007433267.1|	-	1.9e-07	31.5	0.1	0.0038	17.6	0.1	2.3	1	1	0	1	1	1	1	Thioesterase-like	superfamily
Gag_p10	PF02337.12	gi|449066186|ref|YP_007433268.1|	-	0.067	12.9	0.0	0.86	9.3	0.0	2.3	3	0	0	3	3	3	0	Retroviral	GAG	p10	protein
AAA_10	PF12846.2	gi|449066187|ref|YP_007433269.1|	-	1.3e-20	74.0	0.4	8.8e-14	51.6	0.0	2.1	2	0	0	2	2	2	2	AAA-like	domain
DUF87	PF01935.12	gi|449066187|ref|YP_007433269.1|	-	2.7e-15	56.8	4.6	1.1e-14	54.8	2.2	2.5	2	1	0	2	2	2	1	Domain	of	unknown	function	DUF87
DUF853	PF05872.7	gi|449066187|ref|YP_007433269.1|	-	2.7e-08	32.6	0.0	0.0038	15.6	0.0	2.1	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
TrwB_AAD_bind	PF10412.4	gi|449066187|ref|YP_007433269.1|	-	3e-06	26.1	0.0	9.7e-06	24.4	0.0	1.7	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA	PF00004.24	gi|449066187|ref|YP_007433269.1|	-	3.6e-05	23.9	0.6	0.012	15.7	0.1	2.5	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.1	gi|449066187|ref|YP_007433269.1|	-	0.00013	22.0	0.0	0.2	11.8	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|449066187|ref|YP_007433269.1|	-	0.00028	20.4	0.0	0.0024	17.3	0.0	2.0	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
Zot	PF05707.7	gi|449066187|ref|YP_007433269.1|	-	0.004	16.6	0.3	0.025	14.0	0.0	2.2	2	0	0	2	2	2	1	Zonular	occludens	toxin	(Zot)
ResIII	PF04851.10	gi|449066187|ref|YP_007433269.1|	-	0.0098	15.7	0.1	4.3	7.1	0.0	2.3	2	0	0	2	2	2	2	Type	III	restriction	enzyme,	res	subunit
Miro	PF08477.8	gi|449066187|ref|YP_007433269.1|	-	0.098	13.1	0.0	0.23	11.9	0.0	1.6	1	0	0	1	1	1	0	Miro-like	protein
AAA_23	PF13476.1	gi|449066187|ref|YP_007433269.1|	-	1.6	9.0	5.3	14	5.9	3.6	2.3	1	1	0	1	1	1	0	AAA	domain
NurA	PF09376.5	gi|449066188|ref|YP_007433270.1|	-	2.2e-31	109.2	0.4	2.7e-31	108.9	0.3	1.1	1	0	0	1	1	1	1	NurA	domain
Pyr_redox_2	PF07992.9	gi|449066189|ref|YP_007433271.1|	-	1.1e-24	87.4	2.2	1.2e-23	84.1	1.5	3.3	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|449066189|ref|YP_007433271.1|	-	1e-18	67.3	0.0	2.4e-18	66.1	0.0	1.7	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.22	gi|449066189|ref|YP_007433271.1|	-	7.6e-13	48.6	13.0	9.9e-12	45.1	1.5	4.0	4	0	0	4	4	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|449066189|ref|YP_007433271.1|	-	1.6e-11	44.6	0.0	3e-06	27.4	0.0	3.1	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|449066189|ref|YP_007433271.1|	-	1.2e-07	31.6	0.2	0.021	14.8	0.1	2.8	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
DAO	PF01266.19	gi|449066189|ref|YP_007433271.1|	-	7.6e-06	25.0	8.5	0.0011	17.9	0.4	4.0	2	2	1	4	4	4	1	FAD	dependent	oxidoreductase
GIDA	PF01134.17	gi|449066189|ref|YP_007433271.1|	-	5.9e-05	22.0	0.1	0.062	12.1	0.0	2.4	2	0	0	2	2	2	2	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.9	gi|449066189|ref|YP_007433271.1|	-	0.00019	20.0	1.9	0.088	11.2	0.0	2.6	3	0	0	3	3	3	2	HI0933-like	protein
NAD_binding_7	PF13241.1	gi|449066189|ref|YP_007433271.1|	-	0.00037	20.6	0.3	0.062	13.5	0.1	2.5	2	0	0	2	2	2	1	Putative	NAD(P)-binding
FAD_binding_2	PF00890.19	gi|449066189|ref|YP_007433271.1|	-	0.00054	18.9	0.7	0.33	9.7	0.0	2.8	3	0	0	3	3	3	2	FAD	binding	domain
Lycopene_cycl	PF05834.7	gi|449066189|ref|YP_007433271.1|	-	0.0022	17.0	0.3	0.15	10.9	0.0	2.4	2	0	0	2	2	2	1	Lycopene	cyclase	protein
NAD_binding_9	PF13454.1	gi|449066189|ref|YP_007433271.1|	-	0.0038	17.0	2.8	3	7.6	0.0	3.2	3	1	1	4	4	4	2	FAD-NAD(P)-binding
TrkA_N	PF02254.13	gi|449066189|ref|YP_007433271.1|	-	0.013	15.5	0.5	0.098	12.6	0.2	2.5	3	0	0	3	3	3	0	TrkA-N	domain
K_oxygenase	PF13434.1	gi|449066189|ref|YP_007433271.1|	-	0.015	14.1	0.0	0.043	12.7	0.0	1.7	2	0	0	2	2	2	0	L-lysine	6-monooxygenase	(NADPH-requiring)
3HCDH_N	PF02737.13	gi|449066189|ref|YP_007433271.1|	-	0.022	14.4	0.2	0.042	13.4	0.1	1.5	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Thi4	PF01946.12	gi|449066189|ref|YP_007433271.1|	-	0.065	12.3	4.0	3.9	6.4	0.0	3.0	3	0	0	3	3	3	0	Thi4	family
Trp_halogenase	PF04820.9	gi|449066189|ref|YP_007433271.1|	-	0.082	11.5	0.7	0.15	10.6	0.0	1.7	2	0	0	2	2	2	0	Tryptophan	halogenase
FAD_binding_3	PF01494.14	gi|449066189|ref|YP_007433271.1|	-	0.086	11.8	3.3	0.29	10.1	0.3	2.1	2	0	0	2	2	2	0	FAD	binding	domain
Shikimate_DH	PF01488.15	gi|449066189|ref|YP_007433271.1|	-	0.15	12.1	1.5	1.8	8.6	0.1	3.1	4	0	0	4	4	4	0	Shikimate	/	quinate	5-dehydrogenase
bact-PGI_C	PF10432.4	gi|449066191|ref|YP_007433273.1|	-	1.1e-34	119.3	0.1	2.2e-34	118.4	0.1	1.5	1	0	0	1	1	1	1	Bacterial	phospho-glucose	isomerase	C-terminal	region
SIS	PF01380.17	gi|449066191|ref|YP_007433273.1|	-	4e-07	29.7	0.3	2.3e-06	27.2	0.2	2.1	1	1	0	1	1	1	1	SIS	domain
PK_C	PF02887.11	gi|449066191|ref|YP_007433273.1|	-	0.015	14.8	0.7	0.33	10.5	0.0	2.5	1	1	1	2	2	2	0	Pyruvate	kinase,	alpha/beta	domain
SIS_2	PF13580.1	gi|449066191|ref|YP_007433273.1|	-	0.059	13.0	0.1	0.26	10.9	0.0	2.0	2	0	0	2	2	2	0	SIS	domain
tRNA-synt_1e	PF01406.14	gi|449066192|ref|YP_007433274.1|	-	2e-122	408.0	0.2	3.1e-122	407.4	0.1	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1g	PF09334.6	gi|449066192|ref|YP_007433274.1|	-	6.3e-18	64.5	2.4	9.2e-10	37.7	0.4	2.2	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(M)
DALR_2	PF09190.6	gi|449066192|ref|YP_007433274.1|	-	2e-07	31.1	1.0	1.1e-05	25.6	0.3	2.8	3	0	0	3	3	3	1	DALR	domain
tRNA-synt_1	PF00133.17	gi|449066192|ref|YP_007433274.1|	-	8.8e-06	23.9	1.9	0.0022	16.0	0.0	3.0	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1f	PF01921.13	gi|449066192|ref|YP_007433274.1|	-	0.0001	21.1	0.9	0.00028	19.6	0.1	2.0	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(K)
tRNA-synt_1c	PF00749.16	gi|449066192|ref|YP_007433274.1|	-	0.0067	15.1	1.9	0.051	12.2	0.1	2.9	3	0	0	3	3	3	1	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
MutS_III	PF05192.13	gi|449066192|ref|YP_007433274.1|	-	0.1	12.3	0.1	2.6	7.7	0.1	2.3	1	1	0	2	2	2	0	MutS	domain	III
Fib_alpha	PF08702.5	gi|449066192|ref|YP_007433274.1|	-	0.47	10.5	2.2	15	5.7	0.5	2.3	2	0	0	2	2	2	0	Fibrinogen	alpha/beta	chain	family
NUDIX	PF00293.23	gi|449066193|ref|YP_007433275.1|	-	3.8e-20	71.9	0.0	5.1e-20	71.4	0.0	1.2	1	0	0	1	1	1	1	NUDIX	domain
ELFV_dehydrog	PF00208.16	gi|449066195|ref|YP_007433277.1|	-	1.3e-66	224.6	3.4	1.9e-66	224.1	2.3	1.3	1	0	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
ELFV_dehydrog_N	PF02812.13	gi|449066195|ref|YP_007433277.1|	-	1.7e-50	170.0	0.0	3.1e-50	169.1	0.0	1.5	1	0	0	1	1	1	1	Glu/Leu/Phe/Val	dehydrogenase,	dimerisation	domain
2-Hacid_dh_C	PF02826.14	gi|449066195|ref|YP_007433277.1|	-	0.0027	16.9	0.5	0.0048	16.0	0.3	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Bac_GDH	PF05088.7	gi|449066195|ref|YP_007433277.1|	-	0.011	13.1	0.1	0.015	12.7	0.0	1.1	1	0	0	1	1	1	0	Bacterial	NAD-glutamate	dehydrogenase
AlaDh_PNT_C	PF01262.16	gi|449066195|ref|YP_007433277.1|	-	0.016	14.8	1.1	0.019	14.5	0.1	1.7	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
DUF131	PF01998.12	gi|449066196|ref|YP_007433278.1|	-	5.8e-21	73.6	3.6	5.8e-21	73.6	2.5	2.0	1	1	1	2	2	2	1	Protein	of	unknown	function	DUF131
MpPF26	PF07666.6	gi|449066196|ref|YP_007433278.1|	-	0.0042	16.9	3.9	0.0063	16.4	2.7	1.4	1	1	0	1	1	1	1	M	penetrans	paralogue	family	26
DUF2899	PF11449.3	gi|449066196|ref|YP_007433278.1|	-	0.005	16.0	1.8	0.0059	15.8	1.3	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2899)
Neurensin	PF14927.1	gi|449066196|ref|YP_007433278.1|	-	0.0061	15.9	2.3	0.23	10.8	0.0	2.0	2	0	0	2	2	2	1	Neurensin
DUF4190	PF13828.1	gi|449066196|ref|YP_007433278.1|	-	0.0081	15.6	11.6	0.18	11.3	0.0	2.9	2	1	1	3	3	3	2	Domain	of	unknown	function	(DUF4190)
PIRT	PF15099.1	gi|449066196|ref|YP_007433278.1|	-	0.0084	15.3	0.0	0.0084	15.3	0.0	2.1	2	0	0	2	2	2	1	Phosphoinositide-interacting	protein	family
DUF4097	PF13349.1	gi|449066196|ref|YP_007433278.1|	-	0.0086	15.6	0.3	0.0086	15.6	0.2	2.0	2	0	0	2	2	1	1	Domain	of	unknown	function	(DUF4097)
5TM-5TMR_LYT	PF07694.7	gi|449066196|ref|YP_007433278.1|	-	0.015	14.5	5.3	0.02	14.1	3.7	1.2	1	0	0	1	1	1	0	5TMR	of	5TMR-LYT
Baculo_11_kDa	PF06143.6	gi|449066196|ref|YP_007433278.1|	-	0.017	14.4	7.3	0.76	9.1	0.0	2.1	2	0	0	2	2	2	0	Baculovirus	11	kDa	family
AgrB	PF04647.10	gi|449066196|ref|YP_007433278.1|	-	0.022	13.8	2.4	0.028	13.4	1.7	1.3	1	0	0	1	1	1	0	Accessory	gene	regulator	B
COPI_assoc	PF08507.5	gi|449066196|ref|YP_007433278.1|	-	0.028	14.1	0.1	0.028	14.1	0.0	2.1	1	1	1	2	2	2	0	COPI	associated	protein
Cytochrom_B_N	PF00033.14	gi|449066196|ref|YP_007433278.1|	-	0.029	13.7	0.3	0.059	12.7	0.2	1.4	1	1	0	1	1	1	0	Cytochrome	b(N-terminal)/b6/petB
EcsB	PF05975.7	gi|449066196|ref|YP_007433278.1|	-	0.03	12.8	0.6	0.033	12.6	0.4	1.0	1	0	0	1	1	1	0	Bacterial	ABC	transporter	protein	EcsB
Ni_hydr_CYTB	PF01292.15	gi|449066196|ref|YP_007433278.1|	-	0.033	13.5	0.1	0.042	13.2	0.1	1.1	1	0	0	1	1	1	0	Prokaryotic	cytochrome	b561
7tm_1	PF00001.16	gi|449066196|ref|YP_007433278.1|	-	0.036	13.2	0.2	0.044	12.9	0.2	1.1	1	0	0	1	1	1	0	7	transmembrane	receptor	(rhodopsin	family)
IncA	PF04156.9	gi|449066196|ref|YP_007433278.1|	-	0.04	13.5	5.0	0.087	12.4	0.0	2.1	2	0	0	2	2	2	0	IncA	protein
OAD_gamma	PF04277.8	gi|449066196|ref|YP_007433278.1|	-	0.082	13.2	0.1	0.082	13.2	0.0	2.1	2	0	0	2	2	1	0	Oxaloacetate	decarboxylase,	gamma	chain
EphA2_TM	PF14575.1	gi|449066196|ref|YP_007433278.1|	-	0.099	13.0	0.1	0.099	13.0	0.0	2.1	2	0	0	2	2	2	0	Ephrin	type-A	receptor	2	transmembrane	domain
ODV-E18	PF10717.4	gi|449066196|ref|YP_007433278.1|	-	0.14	11.6	5.9	0.61	9.5	0.1	2.1	2	0	0	2	2	2	0	Occlusion-derived	virus	envelope	protein	ODV-E18
GRP	PF07172.6	gi|449066196|ref|YP_007433278.1|	-	0.17	12.3	2.9	0.74	10.3	0.0	2.0	2	0	0	2	2	2	0	Glycine	rich	protein	family
Sigma_reg_N	PF13800.1	gi|449066196|ref|YP_007433278.1|	-	0.18	11.8	5.7	1.7	8.7	0.1	2.1	2	0	0	2	2	2	0	Sigma	factor	regulator	N-terminal
DUF3357	PF11837.3	gi|449066196|ref|YP_007433278.1|	-	0.19	11.6	0.9	3	7.7	0.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3357)
TMEM51	PF15345.1	gi|449066196|ref|YP_007433278.1|	-	0.2	11.3	5.3	0.39	10.3	3.5	1.6	1	1	0	1	1	1	0	Transmembrane	protein	51
Tic20	PF09685.5	gi|449066196|ref|YP_007433278.1|	-	0.2	11.6	6.3	2.2	8.3	0.0	2.1	2	0	0	2	2	2	0	Tic20-like	protein
DUF4064	PF13273.1	gi|449066196|ref|YP_007433278.1|	-	0.36	10.9	13.0	2.4	8.3	9.0	2.0	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4064)
DUF3671	PF12420.3	gi|449066196|ref|YP_007433278.1|	-	0.39	10.7	4.6	0.59	10.1	3.2	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function
SieB	PF14163.1	gi|449066196|ref|YP_007433278.1|	-	0.41	10.2	2.5	0.45	10.0	0.0	1.9	2	0	0	2	2	2	0	Superinfection	exclusion	protein	B
TarH	PF02203.10	gi|449066196|ref|YP_007433278.1|	-	0.54	10.0	0.0	0.54	10.0	0.0	2.0	2	0	0	2	2	1	0	Tar	ligand	binding	domain	homologue
Yip1	PF04893.12	gi|449066196|ref|YP_007433278.1|	-	0.63	9.5	7.4	1.9	7.9	5.1	1.7	1	1	0	1	1	1	0	Yip1	domain
DUF202	PF02656.10	gi|449066196|ref|YP_007433278.1|	-	0.73	10.1	3.6	3.2	8.0	2.4	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF202)
P12	PF12669.2	gi|449066196|ref|YP_007433278.1|	-	1.1	9.5	0.1	1.1	9.5	0.1	2.3	2	0	0	2	2	1	0	Virus	attachment	protein	p12	family
DUF2970	PF11174.3	gi|449066196|ref|YP_007433278.1|	-	1.2	8.7	14.6	4	7.0	3.9	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2970)
DUF1049	PF06305.6	gi|449066196|ref|YP_007433278.1|	-	1.2	8.6	3.6	25	4.4	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1049)
Sex_peptide	PF08138.6	gi|449066196|ref|YP_007433278.1|	-	1.4	8.8	0.0	1.4	8.8	0.0	2.2	2	0	0	2	2	2	0	Sex	peptide	(SP)	family
Shisa	PF13908.1	gi|449066196|ref|YP_007433278.1|	-	1.9	8.6	10.7	3.6	7.7	0.1	2.1	1	1	1	2	2	2	0	Wnt	and	FGF	inhibitory	regulator
TMEM154	PF15102.1	gi|449066196|ref|YP_007433278.1|	-	1.9	8.1	4.4	4.3	7.0	0.0	2.0	2	0	0	2	2	2	0	TMEM154	protein	family
Nucleos_tra2_N	PF01773.15	gi|449066196|ref|YP_007433278.1|	-	2	8.8	8.2	0.28	11.5	1.5	2.0	2	0	0	2	2	2	0	Na+	dependent	nucleoside	transporter	N-terminus
DUF3784	PF12650.2	gi|449066196|ref|YP_007433278.1|	-	2	8.4	10.1	0.46	10.4	2.2	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3784)
DUF3185	PF11381.3	gi|449066196|ref|YP_007433278.1|	-	2.1	8.1	11.2	6.9	6.5	1.7	2.7	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3185)
DUF1056	PF06341.6	gi|449066196|ref|YP_007433278.1|	-	2.6	8.1	8.7	0.19	11.7	0.6	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1056)
DUF2500	PF10694.4	gi|449066196|ref|YP_007433278.1|	-	2.7	8.0	0.0	2.7	8.0	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2500)
Chordopox_A13L	PF05961.6	gi|449066196|ref|YP_007433278.1|	-	3	7.8	7.9	0.68	9.9	0.1	2.2	2	0	0	2	2	2	0	Chordopoxvirus	A13L	protein
CRPA	PF05745.6	gi|449066196|ref|YP_007433278.1|	-	3.1	7.5	8.1	0.76	9.5	0.2	2.1	2	0	0	2	2	2	0	Chlamydia	15	kDa	cysteine-rich	outer	membrane	protein	(CRPA)
Pox_A14	PF05767.7	gi|449066196|ref|YP_007433278.1|	-	3.1	7.8	9.6	0.51	10.3	0.3	2.2	1	1	1	2	2	2	0	Poxvirus	virion	envelope	protein	A14
DUF4307	PF14155.1	gi|449066196|ref|YP_007433278.1|	-	4.4	7.1	5.2	22	4.8	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4307)
DUF2371	PF10177.4	gi|449066196|ref|YP_007433278.1|	-	4.8	7.0	9.1	31	4.4	5.8	2.0	1	1	0	1	1	1	0	Uncharacterised	conserved	protein	(DUF2371)
SdpI	PF13630.1	gi|449066196|ref|YP_007433278.1|	-	5.7	6.7	16.1	4.7	6.9	4.5	2.1	2	0	0	2	2	2	0	SdpI/YhfL	protein	family
Wzy_C	PF04932.10	gi|449066196|ref|YP_007433278.1|	-	6.2	6.5	8.5	19	5.0	0.2	2.0	1	1	1	2	2	2	0	O-Antigen	ligase
AAA_21	PF13304.1	gi|449066197|ref|YP_007433279.1|	-	7.2e-20	72.1	5.2	7.2e-20	72.1	3.6	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_15	PF13175.1	gi|449066197|ref|YP_007433279.1|	-	4.1e-18	65.6	14.5	9.2e-13	48.0	0.1	2.7	3	0	0	3	3	3	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|449066197|ref|YP_007433279.1|	-	7.4e-10	39.4	2.0	7.4e-10	39.4	1.4	2.0	2	1	0	2	2	2	1	AAA	domain
SMC_N	PF02463.14	gi|449066197|ref|YP_007433279.1|	-	1.5e-08	34.1	1.0	2.4e-07	30.2	0.7	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
ABC_tran	PF00005.22	gi|449066197|ref|YP_007433279.1|	-	0.013	15.8	0.4	0.33	11.2	0.3	2.7	2	1	0	2	2	2	0	ABC	transporter
DUF2813	PF11398.3	gi|449066197|ref|YP_007433279.1|	-	0.047	12.7	0.4	0.89	8.5	0.1	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2813)
adh_short_C2	PF13561.1	gi|449066198|ref|YP_007433280.1|	-	1.3e-30	106.9	0.0	1.6e-30	106.6	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|449066198|ref|YP_007433280.1|	-	2.4e-16	60.1	0.0	4.5e-16	59.2	0.0	1.4	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|449066198|ref|YP_007433280.1|	-	3.3e-06	26.8	0.0	5.9e-06	26.0	0.0	1.3	1	0	0	1	1	1	1	KR	domain
NAD_binding_10	PF13460.1	gi|449066198|ref|YP_007433280.1|	-	0.044	13.7	0.0	0.073	13.0	0.0	1.4	1	0	0	1	1	1	0	NADH(P)-binding
THF_DHG_CYH_C	PF02882.14	gi|449066198|ref|YP_007433280.1|	-	0.085	11.9	0.0	0.15	11.0	0.0	1.5	1	0	0	1	1	1	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
UDG	PF03167.14	gi|449066199|ref|YP_007433281.1|	-	5e-42	142.9	0.0	6.5e-42	142.5	0.0	1.1	1	0	0	1	1	1	1	Uracil	DNA	glycosylase	superfamily
Baculo_LEF5_C	PF11792.3	gi|449066199|ref|YP_007433281.1|	-	0.098	12.0	0.1	0.21	11.0	0.1	1.5	1	0	0	1	1	1	0	Baculoviridae	late	expression	factor	5	C-terminal	domain
PAP_assoc	PF03828.14	gi|449066200|ref|YP_007433282.1|	-	0.012	15.5	0.1	0.027	14.4	0.1	1.7	1	1	0	1	1	1	0	Cid1	family	poly	A	polymerase
Terminase_5	PF06056.7	gi|449066200|ref|YP_007433282.1|	-	0.06	12.9	0.1	0.15	11.6	0.1	1.7	1	0	0	1	1	1	0	Putative	ATPase	subunit	of	terminase	(gpP-like)
Fe_dep_repr_C	PF02742.10	gi|449066201|ref|YP_007433283.1|	-	1.5e-19	69.4	0.0	2.1e-19	68.9	0.0	1.3	1	0	0	1	1	1	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
HTH_45	PF14947.1	gi|449066201|ref|YP_007433283.1|	-	5.6e-06	26.0	0.0	9e-06	25.4	0.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix
DUF4423	PF14394.1	gi|449066201|ref|YP_007433283.1|	-	7.9e-06	25.5	0.1	1.1e-05	25.0	0.0	1.3	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
Fe_dep_repress	PF01325.14	gi|449066201|ref|YP_007433283.1|	-	1.2e-05	25.1	0.0	1.8e-05	24.6	0.0	1.3	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
FeoC	PF09012.5	gi|449066201|ref|YP_007433283.1|	-	0.00013	21.5	0.1	0.00022	20.8	0.0	1.4	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
HTH_27	PF13463.1	gi|449066201|ref|YP_007433283.1|	-	0.00014	22.1	0.0	0.00051	20.3	0.0	1.9	1	1	1	2	2	2	1	Winged	helix	DNA-binding	domain
MarR	PF01047.17	gi|449066201|ref|YP_007433283.1|	-	0.00022	20.8	0.0	0.00042	19.9	0.0	1.4	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|449066201|ref|YP_007433283.1|	-	0.00031	20.3	0.1	0.0019	17.8	0.0	2.1	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
LexA_DNA_bind	PF01726.11	gi|449066201|ref|YP_007433283.1|	-	0.00072	19.0	0.0	0.0015	18.0	0.0	1.6	2	0	0	2	2	1	1	LexA	DNA	binding	domain
MarR_2	PF12802.2	gi|449066201|ref|YP_007433283.1|	-	0.00074	19.1	0.0	0.0014	18.2	0.0	1.5	1	0	0	1	1	1	1	MarR	family
HTH_IclR	PF09339.5	gi|449066201|ref|YP_007433283.1|	-	0.0024	17.4	0.0	0.017	14.6	0.0	2.0	2	0	0	2	2	2	1	IclR	helix-turn-helix	domain
HTH_24	PF13412.1	gi|449066201|ref|YP_007433283.1|	-	0.0037	16.6	0.1	0.013	14.8	0.0	2.0	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
Ribosomal_S19e	PF01090.14	gi|449066201|ref|YP_007433283.1|	-	0.012	15.0	0.0	0.015	14.6	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	protein	S19e
DUF2250	PF10007.4	gi|449066201|ref|YP_007433283.1|	-	0.028	14.3	0.2	0.056	13.3	0.1	1.5	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_12	PF08461.5	gi|449066201|ref|YP_007433283.1|	-	0.032	13.9	0.0	0.064	13.0	0.0	1.5	1	0	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
HemN_C	PF06969.11	gi|449066201|ref|YP_007433283.1|	-	0.038	14.0	0.0	0.11	12.5	0.0	1.7	2	0	0	2	2	2	0	HemN	C-terminal	domain
HTH_34	PF13601.1	gi|449066201|ref|YP_007433283.1|	-	0.044	13.8	0.1	0.17	11.9	0.1	2.0	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
Rrf2	PF02082.15	gi|449066201|ref|YP_007433283.1|	-	0.052	13.6	0.0	0.13	12.4	0.0	1.7	2	0	0	2	2	2	0	Transcriptional	regulator
HGD-D	PF06050.8	gi|449066201|ref|YP_007433283.1|	-	0.065	12.0	0.1	0.16	10.7	0.1	1.7	1	1	0	1	1	1	0	2-hydroxyglutaryl-CoA	dehydratase,	D-component
IF2_N	PF04760.10	gi|449066201|ref|YP_007433283.1|	-	0.081	12.5	0.3	3.1	7.5	0.0	2.9	2	1	1	3	3	3	0	Translation	initiation	factor	IF-2,	N-terminal	region
Mrr_N	PF14338.1	gi|449066201|ref|YP_007433283.1|	-	0.1	12.6	0.2	0.23	11.5	0.1	1.8	1	1	0	1	1	1	0	Mrr	N-terminal	domain
Ftsk_gamma	PF09397.5	gi|449066201|ref|YP_007433283.1|	-	0.14	11.9	0.0	0.3	10.8	0.0	1.5	1	0	0	1	1	1	0	Ftsk	gamma	domain
DHDPS	PF00701.17	gi|449066202|ref|YP_007433284.1|	-	3.1e-55	186.8	0.0	3.4e-55	186.7	0.0	1.0	1	0	0	1	1	1	1	Dihydrodipicolinate	synthetase	family
HTH_20	PF12840.2	gi|449066203|ref|YP_007433285.1|	-	4.2e-06	26.4	0.0	6.8e-06	25.7	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|449066203|ref|YP_007433285.1|	-	7.8e-06	25.1	0.0	1.4e-05	24.3	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.2	gi|449066203|ref|YP_007433285.1|	-	2.1e-05	24.1	0.0	2.9e-05	23.6	0.0	1.2	1	0	0	1	1	1	1	MarR	family
LexA_DNA_bind	PF01726.11	gi|449066203|ref|YP_007433285.1|	-	8.7e-05	22.0	0.0	0.00016	21.1	0.0	1.4	1	0	0	1	1	1	1	LexA	DNA	binding	domain
TrmB	PF01978.14	gi|449066203|ref|YP_007433285.1|	-	9.8e-05	21.9	0.3	0.00014	21.4	0.2	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_5	PF01022.15	gi|449066203|ref|YP_007433285.1|	-	0.0014	18.2	0.0	0.0028	17.2	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_11	PF08279.7	gi|449066203|ref|YP_007433285.1|	-	0.0023	17.5	0.1	0.0055	16.3	0.0	1.6	2	0	0	2	2	2	1	HTH	domain
HTH_27	PF13463.1	gi|449066203|ref|YP_007433285.1|	-	0.0051	17.0	0.0	0.0078	16.5	0.0	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_36	PF13730.1	gi|449066203|ref|YP_007433285.1|	-	0.037	14.1	0.0	0.061	13.4	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_12	PF08461.5	gi|449066203|ref|YP_007433285.1|	-	0.099	12.3	0.0	0.27	10.9	0.0	1.8	2	0	0	2	2	2	0	Ribonuclease	R	winged-helix	domain
HTH_28	PF13518.1	gi|449066203|ref|YP_007433285.1|	-	0.15	12.0	0.0	0.25	11.3	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
DUF3043	PF11241.3	gi|449066203|ref|YP_007433285.1|	-	0.26	10.8	2.0	0.41	10.2	1.4	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3043)
AAA_17	PF13207.1	gi|449066204|ref|YP_007433286.1|	-	0.0017	19.1	1.2	0.028	15.2	0.0	3.4	3	1	0	3	3	3	1	AAA	domain
DUF1474	PF07342.6	gi|449066204|ref|YP_007433286.1|	-	0.0043	17.2	3.2	0.0043	17.2	2.2	3.5	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF1474)
AAA_18	PF13238.1	gi|449066204|ref|YP_007433286.1|	-	0.0043	17.3	0.1	0.0043	17.3	0.1	3.2	4	0	0	4	4	4	1	AAA	domain
AAA_10	PF12846.2	gi|449066204|ref|YP_007433286.1|	-	0.032	13.6	1.3	0.66	9.3	0.9	3.0	1	1	0	1	1	1	0	AAA-like	domain
AAA_14	PF13173.1	gi|449066204|ref|YP_007433286.1|	-	0.068	13.0	3.6	0.069	13.0	0.2	2.8	2	0	0	2	2	2	0	AAA	domain
Aldedh	PF00171.17	gi|449066205|ref|YP_007433287.1|	-	2.5e-131	438.2	0.0	3.2e-131	437.8	0.0	1.1	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
LuxC	PF05893.9	gi|449066205|ref|YP_007433287.1|	-	5e-07	28.7	0.0	1e-05	24.5	0.0	2.3	1	1	0	1	1	1	1	Acyl-CoA	reductase	(LuxC)
CoA_binding_2	PF13380.1	gi|449066207|ref|YP_007433289.1|	-	2.1e-35	121.3	0.1	2.5e-35	121.1	0.1	1.1	1	0	0	1	1	1	1	CoA	binding	domain
CoA_binding	PF02629.14	gi|449066207|ref|YP_007433289.1|	-	1e-05	25.9	0.0	1.7e-05	25.2	0.0	1.4	1	0	0	1	1	1	1	CoA	binding	domain
DUF308	PF03729.8	gi|449066208|ref|YP_007433290.1|	-	0.0037	17.2	3.3	0.0045	16.9	2.3	1.2	1	0	0	1	1	1	1	Short	repeat	of	unknown	function	(DUF308)
YjgP_YjgQ	PF03739.9	gi|449066208|ref|YP_007433290.1|	-	0.34	9.6	1.9	0.35	9.5	1.3	1.0	1	0	0	1	1	1	0	Predicted	permease	YjgP/YjgQ	family
DUF2970	PF11174.3	gi|449066208|ref|YP_007433290.1|	-	0.77	9.3	7.9	0.14	11.7	3.3	1.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2970)
Tetraspannin	PF00335.15	gi|449066208|ref|YP_007433290.1|	-	3.5	6.8	6.4	4.7	6.4	4.4	1.4	1	1	0	1	1	1	0	Tetraspanin	family
TFIIS_C	PF01096.13	gi|449066209|ref|YP_007433291.1|	-	1.2e-24	85.5	10.8	3.4e-22	77.7	1.0	3.2	3	0	0	3	3	3	2	Transcription	factor	S-II	(TFIIS)
RNA_POL_M_15KD	PF02150.11	gi|449066209|ref|YP_007433291.1|	-	2.2e-09	36.8	3.4	2.2e-09	36.8	2.3	3.1	3	0	0	3	3	3	1	RNA	polymerases	M/15	Kd	subunit
Zn_Tnp_IS1595	PF12760.2	gi|449066209|ref|YP_007433291.1|	-	1.6e-08	34.2	8.7	0.00037	20.2	0.4	2.4	2	0	0	2	2	2	2	Transposase	zinc-ribbon	domain
DUF2387	PF09526.5	gi|449066209|ref|YP_007433291.1|	-	5e-08	32.7	5.3	2.3e-05	24.2	0.9	2.2	2	0	0	2	2	2	2	Probable	metal-binding	protein	(DUF2387)
TF_Zn_Ribbon	PF08271.7	gi|449066209|ref|YP_007433291.1|	-	1.4e-05	24.2	7.3	0.033	13.4	0.2	3.3	2	2	0	2	2	2	2	TFIIB	zinc-binding
DZR	PF12773.2	gi|449066209|ref|YP_007433291.1|	-	1.5e-05	24.7	9.7	0.00064	19.4	1.0	2.6	2	1	0	2	2	2	2	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|449066209|ref|YP_007433291.1|	-	1.7e-05	23.8	13.3	0.095	11.9	0.2	4.2	4	0	0	4	4	4	1	zinc-ribbon	domain
zf-ISL3	PF14690.1	gi|449066209|ref|YP_007433291.1|	-	6.6e-05	22.8	6.4	3.4	7.7	0.0	4.1	3	1	1	4	4	4	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-TFIIB	PF13453.1	gi|449066209|ref|YP_007433291.1|	-	0.00013	21.1	1.7	0.00013	21.1	1.2	2.9	2	1	0	2	2	2	1	Transcription	factor	zinc-finger
OrfB_Zn_ribbon	PF07282.6	gi|449066209|ref|YP_007433291.1|	-	0.00019	21.0	10.5	0.017	14.7	1.1	2.9	1	1	0	2	2	2	2	Putative	transposase	DNA-binding	domain
Zn-ribbon_8	PF09723.5	gi|449066209|ref|YP_007433291.1|	-	0.00062	19.6	15.7	1.6	8.7	0.1	4.4	4	1	0	4	4	4	1	Zinc	ribbon	domain
zinc_ribbon_5	PF13719.1	gi|449066209|ref|YP_007433291.1|	-	0.0011	18.4	14.2	0.13	11.8	0.2	4.4	5	0	0	5	5	4	1	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|449066209|ref|YP_007433291.1|	-	0.0024	17.5	14.4	0.16	11.6	0.3	4.5	5	0	0	5	5	4	1	zinc-ribbon	domain
Zn_ribbon_recom	PF13408.1	gi|449066209|ref|YP_007433291.1|	-	0.0028	17.8	2.7	0.0028	17.8	1.9	2.5	2	1	0	2	2	2	1	Recombinase	zinc	beta	ribbon	domain
Nudix_N_2	PF14803.1	gi|449066209|ref|YP_007433291.1|	-	0.0033	17.0	10.8	0.11	12.2	2.3	3.9	3	1	0	3	3	3	1	Nudix	N-terminal
zinc_ribbon_2	PF13240.1	gi|449066209|ref|YP_007433291.1|	-	0.0034	16.8	21.9	0.21	11.1	0.3	4.5	5	0	0	5	5	4	1	zinc-ribbon	domain
zf-NADH-PPase	PF09297.6	gi|449066209|ref|YP_007433291.1|	-	0.0035	16.8	10.5	0.067	12.7	0.1	4.0	4	0	0	4	4	4	1	NADH	pyrophosphatase	zinc	ribbon	domain
Baculo_LEF5_C	PF11792.3	gi|449066209|ref|YP_007433291.1|	-	0.0061	15.9	2.3	0.23	10.8	0.0	3.2	3	0	0	3	3	3	1	Baculoviridae	late	expression	factor	5	C-terminal	domain
DNA_ligase_ZBD	PF03119.11	gi|449066209|ref|YP_007433291.1|	-	0.0072	15.9	3.3	0.31	10.7	0.0	2.6	2	0	0	2	2	2	1	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Lar_restr_allev	PF14354.1	gi|449066209|ref|YP_007433291.1|	-	0.0096	16.2	10.0	0.81	10.0	0.9	2.7	1	1	1	2	2	2	1	Restriction	alleviation	protein	Lar
Terminase_GpA	PF05876.7	gi|449066209|ref|YP_007433291.1|	-	0.012	14.0	7.1	0.024	12.9	0.5	2.1	1	1	1	2	2	2	0	Phage	terminase	large	subunit	(GpA)
YhfH	PF14149.1	gi|449066209|ref|YP_007433291.1|	-	0.012	15.3	13.8	3.8	7.3	0.1	4.2	3	1	1	4	4	4	0	YhfH-like	protein
zf-DNA_Pol	PF08996.5	gi|449066209|ref|YP_007433291.1|	-	0.016	14.6	3.9	0.16	11.2	0.1	2.2	2	0	0	2	2	2	0	DNA	Polymerase	alpha	zinc	finger
DUF2310	PF10071.4	gi|449066209|ref|YP_007433291.1|	-	0.021	13.8	0.1	0.021	13.8	0.1	1.8	1	1	1	2	2	2	0	Zn-ribbon-containing,	possibly	nucleic-acid-binding	protein	(DUF2310)
C1_1	PF00130.17	gi|449066209|ref|YP_007433291.1|	-	0.025	14.2	2.1	0.025	14.2	1.5	2.7	2	1	1	3	3	3	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
Rubredoxin	PF00301.15	gi|449066209|ref|YP_007433291.1|	-	0.028	14.2	11.4	1.6	8.6	0.2	4.1	4	0	0	4	4	4	0	Rubredoxin
UPF0547	PF10571.4	gi|449066209|ref|YP_007433291.1|	-	0.032	13.9	13.2	4	7.2	0.4	4.4	4	0	0	4	4	4	0	Uncharacterised	protein	family	UPF0547
zf-UBP	PF02148.14	gi|449066209|ref|YP_007433291.1|	-	0.033	14.3	3.0	0.53	10.4	0.5	2.5	1	1	1	2	2	2	0	Zn-finger	in	ubiquitin-hydrolases	and	other	protein
DUF2296	PF10058.4	gi|449066209|ref|YP_007433291.1|	-	0.04	13.6	8.4	0.64	9.8	1.8	3.5	3	1	0	3	3	3	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
zf-MYND	PF01753.13	gi|449066209|ref|YP_007433291.1|	-	0.062	13.1	7.0	1.6	8.6	0.4	2.4	2	0	0	2	2	2	0	MYND	finger
zf-Mss51	PF13824.1	gi|449066209|ref|YP_007433291.1|	-	0.066	13.0	9.1	0.58	10.0	0.3	2.8	2	2	0	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
zf-like	PF04071.7	gi|449066209|ref|YP_007433291.1|	-	0.072	12.7	0.5	0.072	12.7	0.4	2.1	2	1	0	2	2	2	0	Cysteine-rich	small	domain
DUF4503	PF14951.1	gi|449066209|ref|YP_007433291.1|	-	0.12	10.4	2.6	0.068	11.3	0.2	1.6	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4503)
DRP	PF06044.7	gi|449066209|ref|YP_007433291.1|	-	0.14	11.1	6.8	0.41	9.5	1.0	2.0	1	1	0	2	2	2	0	Dam-replacing	family
GFA	PF04828.9	gi|449066209|ref|YP_007433291.1|	-	0.14	12.0	10.2	0.28	11.1	1.3	3.4	1	1	3	4	4	4	0	Glutathione-dependent	formaldehyde-activating	enzyme
DUF35_N	PF12172.3	gi|449066209|ref|YP_007433291.1|	-	0.17	11.8	8.1	24	5.0	0.1	4.0	4	0	0	4	4	4	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
C1_2	PF03107.11	gi|449066209|ref|YP_007433291.1|	-	0.2	11.8	8.2	5.5	7.2	2.1	2.7	2	1	0	2	2	2	0	C1	domain
zf-GRF	PF06839.7	gi|449066209|ref|YP_007433291.1|	-	0.21	11.5	10.3	1.3	8.9	0.2	2.9	2	1	0	2	2	2	0	GRF	zinc	finger
DUF329	PF03884.9	gi|449066209|ref|YP_007433291.1|	-	0.24	10.9	6.5	2.5	7.7	0.8	3.3	3	1	0	3	3	3	0	Domain	of	unknown	function	(DUF329)
PhnA_Zn_Ribbon	PF08274.7	gi|449066209|ref|YP_007433291.1|	-	0.25	11.1	9.1	8.9	6.1	0.5	3.6	2	2	0	2	2	2	0	PhnA	Zinc-Ribbon
Ribosomal_L37ae	PF01780.14	gi|449066209|ref|YP_007433291.1|	-	0.28	11.0	9.7	0.14	12.0	1.0	2.8	2	2	0	2	2	2	0	Ribosomal	L37ae	protein	family
PolC_DP2	PF03833.8	gi|449066209|ref|YP_007433291.1|	-	0.37	8.3	6.7	0.33	8.5	0.5	2.0	1	1	1	2	2	2	0	DNA	polymerase	II	large	subunit	DP2
IBR	PF01485.16	gi|449066209|ref|YP_007433291.1|	-	0.37	10.6	12.9	0.12	12.2	1.8	3.0	2	1	0	2	2	2	0	IBR	domain
Ribosomal_S27e	PF01667.12	gi|449066209|ref|YP_007433291.1|	-	0.41	10.2	10.6	3	7.4	0.8	3.8	2	2	0	2	2	2	0	Ribosomal	protein	S27
zf-tcix	PF14952.1	gi|449066209|ref|YP_007433291.1|	-	0.47	9.8	19.9	6.6	6.1	0.7	4.2	3	1	1	4	4	4	0	Putative	treble-clef,	zinc-finger,	Zn-binding
HypA	PF01155.14	gi|449066209|ref|YP_007433291.1|	-	0.5	10.0	9.0	1	9.0	0.9	2.9	1	1	2	3	3	3	0	Hydrogenase	expression/synthesis	hypA	family
Ribosomal_L32p	PF01783.18	gi|449066209|ref|YP_007433291.1|	-	0.52	10.5	5.9	39	4.5	0.1	3.9	2	1	2	4	4	4	0	Ribosomal	L32p	protein	family
DUF164	PF02591.10	gi|449066209|ref|YP_007433291.1|	-	0.59	10.0	6.0	32	4.4	0.1	3.7	4	0	0	4	4	4	0	Putative	zinc	ribbon	domain
zf-C4_Topoisom	PF01396.14	gi|449066209|ref|YP_007433291.1|	-	0.61	9.6	16.5	1.3	8.6	3.6	3.5	3	1	0	3	3	3	0	Topoisomerase	DNA	binding	C4	zinc	finger
C1_4	PF07975.7	gi|449066209|ref|YP_007433291.1|	-	0.63	10.0	9.9	7.2	6.7	1.0	3.1	2	1	1	3	3	3	0	TFIIH	C1-like	domain
DUF2752	PF10825.3	gi|449066209|ref|YP_007433291.1|	-	0.65	10.0	0.0	0.65	10.0	0.0	2.5	3	0	0	3	3	2	0	Protein	of	unknown	function	(DUF2752)
zf-HIT	PF04438.11	gi|449066209|ref|YP_007433291.1|	-	0.67	9.6	15.8	3.4	7.4	0.5	4.1	4	0	0	4	4	4	0	HIT	zinc	finger
Zn_Tnp_IS91	PF14319.1	gi|449066209|ref|YP_007433291.1|	-	0.68	9.4	10.9	4.2	6.9	0.1	3.8	2	2	2	4	4	4	0	Transposase	zinc-binding	domain
Desulfoferrod_N	PF06397.7	gi|449066209|ref|YP_007433291.1|	-	0.7	9.3	15.2	0.45	9.9	0.4	3.4	4	0	0	4	4	3	0	Desulfoferrodoxin,	N-terminal	domain
Opy2	PF09463.5	gi|449066209|ref|YP_007433291.1|	-	0.71	10.0	6.6	2.2	8.4	0.0	3.5	4	0	0	4	4	4	0	Opy2	protein
zf-C2HC5	PF06221.8	gi|449066209|ref|YP_007433291.1|	-	0.74	9.6	7.3	33	4.3	0.0	3.7	3	1	0	3	3	3	0	Putative	zinc	finger	motif,	C2HC5-type
zf-H2C2_2	PF13465.1	gi|449066209|ref|YP_007433291.1|	-	0.78	10.1	18.4	0.8	10.1	0.3	4.2	4	1	0	4	4	4	0	Zinc-finger	double	domain
Tnp_zf-ribbon_2	PF13842.1	gi|449066209|ref|YP_007433291.1|	-	0.8	10.1	12.9	15	6.0	4.1	3.5	3	1	0	3	3	3	0	DDE_Tnp_1-like	zinc-ribbon
DUF2082	PF09855.4	gi|449066209|ref|YP_007433291.1|	-	0.8	9.5	14.0	17	5.3	0.1	4.1	3	1	0	4	4	4	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
RecR	PF02132.10	gi|449066209|ref|YP_007433291.1|	-	0.88	9.0	11.4	1.3	8.4	0.1	3.7	4	0	0	4	4	4	0	RecR	protein
zf-C2H2_4	PF13894.1	gi|449066209|ref|YP_007433291.1|	-	0.89	10.0	8.9	43	4.7	0.3	4.0	4	0	0	4	4	4	0	C2H2-type	zinc	finger
FdhE	PF04216.7	gi|449066209|ref|YP_007433291.1|	-	0.9	9.1	8.6	0.73	9.4	0.3	2.1	1	1	0	2	2	2	0	Protein	involved	in	formate	dehydrogenase	formation
Cys_rich_CPCC	PF14206.1	gi|449066209|ref|YP_007433291.1|	-	1	8.9	7.6	0.6	9.6	1.1	2.9	3	1	0	3	3	2	0	Cysteine-rich	CPCC
C1_3	PF07649.7	gi|449066209|ref|YP_007433291.1|	-	1.2	9.2	0.1	1.2	9.2	0.0	3.1	4	0	0	4	4	2	0	C1-like	domain
Zn_Tnp_IS1	PF03811.8	gi|449066209|ref|YP_007433291.1|	-	1.3	8.6	0.0	1.3	8.6	0.0	3.6	3	1	0	3	3	3	0	InsA	N-terminal	domain
DNA_RNApol_7kD	PF03604.8	gi|449066209|ref|YP_007433291.1|	-	1.3	8.5	12.4	12	5.4	0.2	4.0	4	0	0	4	4	4	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Auto_anti-p27	PF06677.7	gi|449066209|ref|YP_007433291.1|	-	1.7	8.4	16.0	24	4.7	0.1	3.9	3	1	1	4	4	4	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
DUF3797	PF12677.2	gi|449066209|ref|YP_007433291.1|	-	1.9	8.1	0.0	1.9	8.1	0.0	4.0	3	1	1	4	4	3	0	Domain	of	unknown	function	(DUF3797)
zf-CHY	PF05495.7	gi|449066209|ref|YP_007433291.1|	-	2	8.6	9.4	4	7.6	1.3	2.6	1	1	1	2	2	2	0	CHY	zinc	finger
Baculo_ME53	PF06061.6	gi|449066209|ref|YP_007433291.1|	-	4.8	6.0	9.5	0.26	10.2	0.8	2.4	2	1	0	2	2	2	0	Baculoviridae	ME53
zinc-ribbons_6	PF07191.7	gi|449066209|ref|YP_007433291.1|	-	5.2	6.9	8.4	1.2	8.9	0.5	2.8	2	1	0	2	2	2	0	zinc-ribbons
zf-CCHC_4	PF14392.1	gi|449066209|ref|YP_007433291.1|	-	5.5	6.7	8.8	31	4.3	0.0	3.9	4	0	0	4	4	4	0	Zinc	knuckle
DUF1610	PF07754.6	gi|449066209|ref|YP_007433291.1|	-	6	7.0	24.9	8.1	6.6	0.8	4.3	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF1610)
Ribosomal_L44	PF00935.14	gi|449066209|ref|YP_007433291.1|	-	6.9	6.7	8.9	14	5.7	0.4	3.3	3	1	1	4	4	3	0	Ribosomal	protein	L44
zf-UBR	PF02207.15	gi|449066209|ref|YP_007433291.1|	-	8	6.2	9.6	4	7.2	0.5	3.0	2	1	1	3	3	3	0	Putative	zinc	finger	in	N-recognin	(UBR	box)
Rpr2	PF04032.11	gi|449066209|ref|YP_007433291.1|	-	8.4	6.3	13.7	5.5	6.9	2.6	3.5	2	2	0	2	2	2	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
RNA_pol_L_2	PF13656.1	gi|449066211|ref|YP_007433293.1|	-	1.5e-21	75.5	0.0	1.8e-21	75.3	0.0	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
RNA_pol_L	PF01193.19	gi|449066211|ref|YP_007433293.1|	-	3.1e-10	39.0	0.1	3.9e-10	38.7	0.1	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
NuA4	PF09340.5	gi|449066211|ref|YP_007433293.1|	-	0.14	11.7	0.1	0.21	11.2	0.0	1.2	1	0	0	1	1	1	0	Histone	acetyltransferase	subunit	NuA4
ECR1_N	PF14382.1	gi|449066212|ref|YP_007433294.1|	-	1.2e-10	40.4	0.4	4.2e-10	38.7	0.1	2.0	2	0	0	2	2	2	1	Exosome	complex	exonuclease	RRP4	N-terminal	region
OrfB_Zn_ribbon	PF07282.6	gi|449066212|ref|YP_007433294.1|	-	0.00046	19.8	0.5	0.00087	18.9	0.4	1.4	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
S1	PF00575.18	gi|449066212|ref|YP_007433294.1|	-	0.00079	19.4	0.2	0.005	16.9	0.2	2.2	1	1	0	1	1	1	1	S1	RNA	binding	domain
DZR	PF12773.2	gi|449066212|ref|YP_007433294.1|	-	0.0023	17.6	0.4	0.0036	17.0	0.3	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
TF_Zn_Ribbon	PF08271.7	gi|449066212|ref|YP_007433294.1|	-	0.0081	15.4	0.4	0.017	14.4	0.3	1.5	1	0	0	1	1	1	1	TFIIB	zinc-binding
Prok-RING_1	PF14446.1	gi|449066212|ref|YP_007433294.1|	-	0.016	14.9	0.9	0.024	14.3	0.6	1.2	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
EXOSC1	PF10447.4	gi|449066212|ref|YP_007433294.1|	-	0.016	15.1	0.1	0.033	14.1	0.0	1.5	1	0	0	1	1	1	0	Exosome	component	EXOSC1/CSL4
zf-NADH-PPase	PF09297.6	gi|449066212|ref|YP_007433294.1|	-	0.019	14.4	0.4	0.035	13.5	0.3	1.4	1	1	0	1	1	1	0	NADH	pyrophosphatase	zinc	ribbon	domain
Auto_anti-p27	PF06677.7	gi|449066212|ref|YP_007433294.1|	-	0.022	14.5	1.6	0.052	13.3	1.1	1.7	1	0	0	1	1	1	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
HypA	PF01155.14	gi|449066212|ref|YP_007433294.1|	-	0.035	13.7	0.8	0.063	12.9	0.6	1.4	1	1	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
A2L_zn_ribbon	PF08792.5	gi|449066212|ref|YP_007433294.1|	-	0.046	13.2	0.8	0.097	12.1	0.5	1.5	1	0	0	1	1	1	0	A2L	zinc	ribbon	domain
NOB1_Zn_bind	PF08772.6	gi|449066212|ref|YP_007433294.1|	-	0.047	13.5	0.2	0.087	12.6	0.1	1.4	1	0	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
zf-ribbon_3	PF13248.1	gi|449066212|ref|YP_007433294.1|	-	0.082	12.1	2.6	0.32	10.2	1.8	1.9	1	1	1	2	2	2	0	zinc-ribbon	domain
Nudix_N_2	PF14803.1	gi|449066212|ref|YP_007433294.1|	-	0.16	11.7	1.0	1.1	8.9	0.7	2.1	1	1	0	1	1	1	0	Nudix	N-terminal
DNA_RNApol_7kD	PF03604.8	gi|449066212|ref|YP_007433294.1|	-	0.16	11.4	3.2	0.35	10.3	2.2	1.5	1	0	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Zn-ribbon_8	PF09723.5	gi|449066212|ref|YP_007433294.1|	-	0.37	10.7	3.4	6.2	6.8	2.4	2.3	1	1	0	1	1	1	0	Zinc	ribbon	domain
Ribosomal_S27e	PF01667.12	gi|449066212|ref|YP_007433294.1|	-	0.44	10.1	2.2	3.6	7.2	0.1	2.2	2	0	0	2	2	2	0	Ribosomal	protein	S27
zinc_ribbon_2	PF13240.1	gi|449066212|ref|YP_007433294.1|	-	1.7	8.2	4.4	12	5.5	0.5	2.3	1	1	1	2	2	2	0	zinc-ribbon	domain
Diphthamide_syn	PF01866.12	gi|449066213|ref|YP_007433295.1|	-	4.4e-97	325.0	0.0	5.6e-97	324.6	0.0	1.1	1	0	0	1	1	1	1	Putative	diphthamide	synthesis	protein
Phage_Mu_Gam	PF07352.7	gi|449066213|ref|YP_007433295.1|	-	0.0088	15.5	1.2	3.6	7.1	0.0	2.6	2	1	0	2	2	2	2	Bacteriophage	Mu	Gam	like	protein
Acid_phosphat_B	PF03767.9	gi|449066213|ref|YP_007433295.1|	-	0.087	12.1	0.0	0.14	11.4	0.0	1.3	1	0	0	1	1	1	0	HAD	superfamily,	subfamily	IIIB	(Acid	phosphatase)
Y1_Tnp	PF01797.11	gi|449066213|ref|YP_007433295.1|	-	0.11	12.3	0.4	2.1	8.2	0.1	2.6	3	0	0	3	3	3	0	Transposase	IS200	like
HAD_2	PF13419.1	gi|449066213|ref|YP_007433295.1|	-	0.14	12.4	0.0	0.87	9.7	0.0	2.2	1	1	1	2	2	2	0	Haloacid	dehalogenase-like	hydrolase
Ribosomal_L16	PF00252.13	gi|449066214|ref|YP_007433296.1|	-	9.1e-33	112.8	0.4	1e-32	112.6	0.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L16p/L10e
Pcc1	PF09341.5	gi|449066215|ref|YP_007433297.1|	-	5.5e-06	26.3	0.1	6.4e-06	26.1	0.1	1.1	1	0	0	1	1	1	1	Transcription	factor	Pcc1
DUF677	PF05055.7	gi|449066215|ref|YP_007433297.1|	-	0.034	12.8	2.4	0.034	12.8	1.7	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF677)
UPF0104	PF03706.8	gi|449066217|ref|YP_007433299.1|	-	4.4e-18	65.5	24.2	6.5e-18	65.0	16.8	1.3	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0104)
ThiF	PF00899.16	gi|449066218|ref|YP_007433300.1|	-	1.4e-45	154.4	1.3	5.2e-45	152.6	0.2	2.0	2	0	0	2	2	2	1	ThiF	family
MoeZ_MoeB	PF05237.8	gi|449066218|ref|YP_007433300.1|	-	1.3e-12	47.1	0.1	2.5e-12	46.1	0.0	1.5	1	0	0	1	1	1	1	MoeZ/MoeB	domain
NAD_Gly3P_dh_N	PF01210.18	gi|449066218|ref|YP_007433300.1|	-	0.0005	19.8	0.1	0.001	18.8	0.0	1.5	1	1	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
2-Hacid_dh_C	PF02826.14	gi|449066218|ref|YP_007433300.1|	-	0.0087	15.2	0.3	0.03	13.4	0.0	1.9	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
ApbA	PF02558.11	gi|449066218|ref|YP_007433300.1|	-	0.011	15.1	0.2	0.021	14.2	0.1	1.6	2	0	0	2	2	2	0	Ketopantoate	reductase	PanE/ApbA
TrkA_N	PF02254.13	gi|449066218|ref|YP_007433300.1|	-	0.018	15.0	1.9	0.02	14.9	0.1	2.0	3	0	0	3	3	3	0	TrkA-N	domain
F420_oxidored	PF03807.12	gi|449066218|ref|YP_007433300.1|	-	0.027	14.9	0.4	0.086	13.2	0.3	1.9	1	1	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
Lycopene_cycl	PF05834.7	gi|449066218|ref|YP_007433300.1|	-	0.037	12.9	0.0	0.05	12.5	0.0	1.2	1	0	0	1	1	1	0	Lycopene	cyclase	protein
FAD_binding_3	PF01494.14	gi|449066218|ref|YP_007433300.1|	-	0.055	12.5	0.1	0.074	12.0	0.0	1.2	1	0	0	1	1	1	0	FAD	binding	domain
3HCDH_N	PF02737.13	gi|449066218|ref|YP_007433300.1|	-	0.058	13.0	0.0	0.096	12.3	0.0	1.4	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_8	PF13450.1	gi|449066218|ref|YP_007433300.1|	-	0.076	13.0	0.9	0.19	11.7	0.4	1.8	2	0	0	2	2	2	0	NAD(P)-binding	Rossmann-like	domain
DAO	PF01266.19	gi|449066218|ref|YP_007433300.1|	-	0.096	11.5	0.4	0.19	10.5	0.3	1.5	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.9	gi|449066218|ref|YP_007433300.1|	-	0.13	12.0	0.0	0.2	11.4	0.0	1.3	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|449066218|ref|YP_007433300.1|	-	0.2	12.0	1.2	0.45	10.9	0.8	1.7	1	1	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
Transketolase_N	PF00456.16	gi|449066219|ref|YP_007433301.1|	-	7e-44	149.9	0.0	1.7e-43	148.7	0.0	1.5	1	1	0	1	1	1	1	Transketolase,	thiamine	diphosphate	binding	domain
DXP_synthase_N	PF13292.1	gi|449066219|ref|YP_007433301.1|	-	1.3e-11	44.0	0.0	1e-08	34.4	0.0	2.2	1	1	1	2	2	2	2	1-deoxy-D-xylulose-5-phosphate	synthase
TPP_enzyme_C	PF02775.16	gi|449066219|ref|YP_007433301.1|	-	2.5e-05	23.9	0.4	0.00062	19.3	0.3	2.2	1	1	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
E1_dh	PF00676.15	gi|449066219|ref|YP_007433301.1|	-	3.8e-05	22.5	0.0	5.5e-05	22.0	0.0	1.2	1	0	0	1	1	1	1	Dehydrogenase	E1	component
XFP_N	PF09364.5	gi|449066219|ref|YP_007433301.1|	-	0.00045	18.8	0.1	0.00058	18.5	0.0	1.2	1	0	0	1	1	1	1	XFP	N-terminal	domain
Transket_pyr	PF02779.19	gi|449066220|ref|YP_007433302.1|	-	4.8e-38	130.4	0.0	7.3e-38	129.8	0.0	1.2	1	0	0	1	1	1	1	Transketolase,	pyrimidine	binding	domain
Transketolase_C	PF02780.15	gi|449066220|ref|YP_007433302.1|	-	3.4e-28	98.0	0.0	1.6e-27	95.8	0.0	1.9	2	0	0	2	2	2	1	Transketolase,	C-terminal	domain
PDH	PF02153.12	gi|449066221|ref|YP_007433303.1|	-	2.3e-20	72.6	0.0	6.6e-20	71.0	0.0	1.7	2	0	0	2	2	2	1	Prephenate	dehydrogenase
CM_2	PF01817.16	gi|449066221|ref|YP_007433303.1|	-	4.1e-16	58.8	0.1	1e-15	57.5	0.0	1.7	1	0	0	1	1	1	1	Chorismate	mutase	type	II
F420_oxidored	PF03807.12	gi|449066221|ref|YP_007433303.1|	-	4.2e-10	39.9	0.0	8.8e-10	38.8	0.0	1.6	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
Shikimate_DH	PF01488.15	gi|449066221|ref|YP_007433303.1|	-	4.3e-08	33.3	0.0	8.6e-08	32.3	0.0	1.6	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
IlvN	PF07991.7	gi|449066221|ref|YP_007433303.1|	-	0.00012	21.5	0.0	0.00027	20.3	0.0	1.6	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
3HCDH_N	PF02737.13	gi|449066221|ref|YP_007433303.1|	-	0.00041	20.0	0.0	0.0019	17.9	0.0	2.0	1	1	1	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.14	gi|449066221|ref|YP_007433303.1|	-	0.0012	18.0	0.0	0.0022	17.1	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
TrkA_N	PF02254.13	gi|449066221|ref|YP_007433303.1|	-	0.013	15.4	0.0	0.051	13.5	0.0	2.0	2	0	0	2	2	2	0	TrkA-N	domain
NAD_binding_2	PF03446.10	gi|449066221|ref|YP_007433303.1|	-	0.014	15.2	0.0	0.035	13.9	0.0	1.7	1	0	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.18	gi|449066221|ref|YP_007433303.1|	-	0.034	13.8	0.0	0.067	12.9	0.0	1.5	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
ApbA	PF02558.11	gi|449066221|ref|YP_007433303.1|	-	0.035	13.5	0.0	0.066	12.6	0.0	1.5	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
Saccharop_dh	PF03435.13	gi|449066221|ref|YP_007433303.1|	-	0.12	11.3	0.0	0.18	10.7	0.0	1.3	1	0	0	1	1	1	0	Saccharopine	dehydrogenase
FlaC_arch	PF05377.6	gi|449066221|ref|YP_007433303.1|	-	1.6	8.6	5.0	0.6	10.0	0.8	2.2	2	0	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
DAHP_synth_1	PF00793.15	gi|449066222|ref|YP_007433304.1|	-	9.8e-74	247.4	0.0	1.2e-73	247.1	0.0	1.0	1	0	0	1	1	1	1	DAHP	synthetase	I	family
NeuB	PF03102.9	gi|449066222|ref|YP_007433304.1|	-	5e-08	32.3	0.0	0.0025	17.0	0.0	2.6	2	1	1	3	3	3	2	NeuB	family
PA	PF02225.17	gi|449066222|ref|YP_007433304.1|	-	0.039	13.6	1.6	7.7	6.2	0.0	3.3	2	1	0	2	2	2	0	PA	domain
DHQ_synthase	PF01761.15	gi|449066223|ref|YP_007433305.1|	-	4e-92	307.8	0.0	4.9e-92	307.5	0.0	1.1	1	0	0	1	1	1	1	3-dehydroquinate	synthase
Fe-ADH	PF00465.14	gi|449066223|ref|YP_007433305.1|	-	1.4e-06	27.1	0.1	0.00024	19.8	0.0	2.3	2	1	0	2	2	2	2	Iron-containing	alcohol	dehydrogenase
Fe-ADH_2	PF13685.1	gi|449066223|ref|YP_007433305.1|	-	1e-05	25.0	0.0	1.8e-05	24.1	0.0	1.5	1	1	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Shikimate_dh_N	PF08501.6	gi|449066224|ref|YP_007433306.1|	-	3.3e-24	84.7	0.0	6.4e-24	83.8	0.0	1.5	1	0	0	1	1	1	1	Shikimate	dehydrogenase	substrate	binding	domain
Shikimate_DH	PF01488.15	gi|449066224|ref|YP_007433306.1|	-	2.9e-11	43.5	0.0	4.8e-11	42.9	0.0	1.3	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
AlaDh_PNT_C	PF01262.16	gi|449066224|ref|YP_007433306.1|	-	0.0015	18.1	0.0	0.0027	17.3	0.0	1.3	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
ApbA	PF02558.11	gi|449066224|ref|YP_007433306.1|	-	0.0016	17.8	0.0	0.0025	17.2	0.0	1.3	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
F420_oxidored	PF03807.12	gi|449066224|ref|YP_007433306.1|	-	0.0019	18.5	0.4	0.008	16.5	0.0	2.2	2	1	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
Saccharop_dh	PF03435.13	gi|449066224|ref|YP_007433306.1|	-	0.0023	17.0	0.0	0.003	16.5	0.0	1.1	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
NAD_binding_7	PF13241.1	gi|449066224|ref|YP_007433306.1|	-	0.0094	16.1	0.0	0.018	15.3	0.0	1.4	1	0	0	1	1	1	1	Putative	NAD(P)-binding
NAD_binding_10	PF13460.1	gi|449066224|ref|YP_007433306.1|	-	0.032	14.2	0.0	0.051	13.5	0.0	1.3	1	0	0	1	1	1	0	NADH(P)-binding
2-Hacid_dh_C	PF02826.14	gi|449066224|ref|YP_007433306.1|	-	0.15	11.1	0.0	0.26	10.4	0.0	1.3	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Chorismate_synt	PF01264.16	gi|449066225|ref|YP_007433307.1|	-	2.1e-131	437.5	0.0	2.4e-131	437.3	0.0	1.0	1	0	0	1	1	1	1	Chorismate	synthase
GHMP_kinases_N	PF00288.21	gi|449066226|ref|YP_007433308.1|	-	1.8e-08	34.3	0.1	3.5e-08	33.4	0.0	1.5	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|449066226|ref|YP_007433308.1|	-	0.0005	20.2	0.0	0.0011	19.1	0.0	1.6	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
EPSP_synthase	PF00275.15	gi|449066227|ref|YP_007433309.1|	-	8.6e-63	212.2	0.0	1e-62	211.9	0.0	1.0	1	0	0	1	1	1	1	EPSP	synthase	(3-phosphoshikimate	1-carboxyvinyltransferase)
DHquinase_I	PF01487.10	gi|449066228|ref|YP_007433310.1|	-	3.2e-15	56.4	0.1	5.2e-15	55.7	0.1	1.3	1	1	0	1	1	1	1	Type	I	3-dehydroquinase
Rieske	PF00355.21	gi|449066229|ref|YP_007433311.1|	-	5.1e-16	58.0	0.0	6e-16	57.8	0.0	1.0	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Rieske_2	PF13806.1	gi|449066229|ref|YP_007433311.1|	-	5.8e-09	35.6	0.0	7.3e-09	35.2	0.0	1.1	1	0	0	1	1	1	1	Rieske-like	[2Fe-2S]	domain
OKR_DC_1_N	PF03709.10	gi|449066230|ref|YP_007433312.1|	-	0.04	13.9	0.2	0.062	13.3	0.1	1.3	1	1	0	1	1	1	0	Orn/Lys/Arg	decarboxylase,	N-terminal	domain
GxGYxYP	PF14323.1	gi|449066230|ref|YP_007433312.1|	-	0.12	11.0	0.3	0.28	9.8	0.1	1.6	2	0	0	2	2	2	0	GxGYxY	sequence	motif	in	domain	of	unknown	function
Helicase_C_2	PF13307.1	gi|449066231|ref|YP_007433313.1|	-	3.2e-25	89.0	0.0	7.2e-25	87.8	0.0	1.6	1	0	0	1	1	1	1	Helicase	C-terminal	domain
DEAD_2	PF06733.10	gi|449066231|ref|YP_007433313.1|	-	3.8e-25	88.2	0.3	7.9e-25	87.2	0.2	1.5	1	0	0	1	1	1	1	DEAD_2
ResIII	PF04851.10	gi|449066231|ref|YP_007433313.1|	-	5.6e-10	39.3	0.2	1.5e-07	31.4	0.1	3.1	2	1	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
DEAD	PF00270.24	gi|449066231|ref|YP_007433313.1|	-	1.4e-05	24.6	0.0	0.034	13.6	0.0	3.6	4	0	0	4	4	4	2	DEAD/DEAH	box	helicase
MCM	PF00493.18	gi|449066231|ref|YP_007433313.1|	-	0.0037	16.1	0.8	0.006	15.4	0.6	1.2	1	0	0	1	1	1	1	MCM2/3/5	family
PhoH	PF02562.11	gi|449066231|ref|YP_007433313.1|	-	0.016	14.4	0.1	0.21	10.7	0.0	2.6	4	0	0	4	4	4	0	PhoH-like	protein
AAA_22	PF13401.1	gi|449066231|ref|YP_007433313.1|	-	0.029	14.5	1.0	3.8	7.6	0.3	3.1	2	1	1	3	3	3	0	AAA	domain
Cyclin_N	PF00134.18	gi|449066231|ref|YP_007433313.1|	-	0.043	13.3	0.9	0.3	10.6	0.0	2.4	2	0	0	2	2	2	0	Cyclin,	N-terminal	domain
Thioredoxin_3	PF13192.1	gi|449066232|ref|YP_007433314.1|	-	5e-09	35.8	0.0	1e-08	34.8	0.0	1.6	1	0	0	1	1	1	1	Thioredoxin	domain
Thioredoxin_4	PF13462.1	gi|449066232|ref|YP_007433314.1|	-	0.0027	17.7	0.0	0.0071	16.3	0.0	1.7	1	0	0	1	1	1	1	Thioredoxin
Glutaredoxin	PF00462.19	gi|449066232|ref|YP_007433314.1|	-	0.013	15.4	0.8	0.035	14.1	0.0	2.2	2	1	0	2	2	2	0	Glutaredoxin
DUF3870	PF12986.2	gi|449066232|ref|YP_007433314.1|	-	0.069	13.4	0.1	0.16	12.2	0.0	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3870)
TusA	PF01206.12	gi|449066233|ref|YP_007433315.1|	-	3.5e-05	23.3	0.0	4.6e-05	22.9	0.0	1.3	1	1	0	1	1	1	1	Sulfurtransferase	TusA
DUF3006	PF11213.3	gi|449066233|ref|YP_007433315.1|	-	0.12	12.1	0.1	0.18	11.5	0.1	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3006)
Sod_Fe_C	PF02777.13	gi|449066234|ref|YP_007433316.1|	-	6.6e-41	138.4	0.5	1e-40	137.8	0.3	1.2	1	0	0	1	1	1	1	Iron/manganese	superoxide	dismutases,	C-terminal	domain
Sod_Fe_N	PF00081.17	gi|449066234|ref|YP_007433316.1|	-	1.5e-29	102.0	0.1	1.5e-29	102.0	0.1	1.7	2	0	0	2	2	2	1	Iron/manganese	superoxide	dismutases,	alpha-hairpin	domain
NTP_transferase	PF00483.18	gi|449066235|ref|YP_007433317.1|	-	2.4e-34	118.7	0.0	3.1e-34	118.3	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|449066235|ref|YP_007433317.1|	-	4.4e-11	43.1	0.0	6.1e-11	42.6	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep	PF00132.19	gi|449066235|ref|YP_007433317.1|	-	5.4e-09	35.1	9.8	0.00011	21.5	0.3	3.4	1	1	2	3	3	3	3	Bacterial	transferase	hexapeptide	(six	repeats)
IspD	PF01128.14	gi|449066235|ref|YP_007433317.1|	-	0.0037	16.8	0.0	0.0078	15.7	0.0	1.5	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
Fucokinase	PF07959.7	gi|449066235|ref|YP_007433317.1|	-	0.075	11.5	0.1	0.16	10.4	0.0	1.6	1	0	0	1	1	1	0	L-fucokinase
Thioredox_DsbH	PF03190.10	gi|449066237|ref|YP_007433319.1|	-	1.2e-62	210.3	0.0	2.1e-62	209.6	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF255
Thioredoxin_7	PF13899.1	gi|449066237|ref|YP_007433319.1|	-	1.8e-17	63.1	0.1	4.5e-17	61.8	0.1	1.7	1	0	0	1	1	1	1	Thioredoxin-like
Thioredoxin_2	PF13098.1	gi|449066237|ref|YP_007433319.1|	-	1.8e-07	31.3	0.0	6.6e-07	29.5	0.0	1.9	1	1	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin	PF00085.15	gi|449066237|ref|YP_007433319.1|	-	6.9e-06	25.6	0.2	1.4e-05	24.6	0.2	1.5	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_8	PF13905.1	gi|449066237|ref|YP_007433319.1|	-	0.011	15.8	0.0	0.35	11.0	0.0	2.8	2	0	0	2	2	2	0	Thioredoxin-like
adh_short_C2	PF13561.1	gi|449066238|ref|YP_007433320.1|	-	2.1e-15	57.1	0.1	4.3e-15	56.1	0.0	1.5	1	1	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|449066238|ref|YP_007433320.1|	-	6.1e-14	52.2	0.2	7.6e-14	51.9	0.1	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|449066238|ref|YP_007433320.1|	-	4.5e-05	23.1	0.1	6.6e-05	22.6	0.1	1.2	1	0	0	1	1	1	1	KR	domain
NAD_binding_10	PF13460.1	gi|449066238|ref|YP_007433320.1|	-	0.00027	21.0	0.0	0.00043	20.3	0.0	1.4	1	1	0	1	1	1	1	NADH(P)-binding
DUF91	PF01939.11	gi|449066239|ref|YP_007433321.1|	-	3.1e-60	203.1	0.0	3.9e-60	202.8	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF91
Cas_Cas4	PF01930.12	gi|449066239|ref|YP_007433321.1|	-	0.00032	20.6	0.1	0.00065	19.6	0.0	1.6	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF83
DUF4263	PF14082.1	gi|449066239|ref|YP_007433321.1|	-	0.042	13.7	0.1	0.17	11.8	0.0	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4263)
UPF0102	PF02021.12	gi|449066239|ref|YP_007433321.1|	-	0.06	13.2	0.0	0.11	12.4	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0102
PDDEXK_1	PF12705.2	gi|449066239|ref|YP_007433321.1|	-	0.13	11.6	0.0	0.16	11.3	0.0	1.2	1	0	0	1	1	1	0	PD-(D/E)XK	nuclease	superfamily
Glycos_transf_2	PF00535.21	gi|449066240|ref|YP_007433322.1|	-	2.4e-21	76.1	0.0	3.8e-21	75.5	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.1	gi|449066240|ref|YP_007433322.1|	-	4.3e-14	52.1	0.0	7.2e-14	51.4	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_tranf_2_3	PF13641.1	gi|449066240|ref|YP_007433322.1|	-	2.1e-13	50.6	0.0	6.4e-13	49.0	0.0	1.6	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.4	gi|449066240|ref|YP_007433322.1|	-	0.043	12.9	0.0	0.065	12.3	0.0	1.2	1	0	0	1	1	1	0	Glycosyltransferase	like	family	2
DUF1201	PF06716.6	gi|449066240|ref|YP_007433322.1|	-	0.45	10.3	7.1	0.62	9.9	4.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1201)
DUF1600	PF07667.6	gi|449066241|ref|YP_007433323.1|	-	2.1	8.4	11.3	0.087	12.9	4.1	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1600)
CcoS	PF03597.10	gi|449066241|ref|YP_007433323.1|	-	3	7.3	16.1	0.64	9.5	1.5	2.2	2	0	0	2	2	2	0	Cytochrome	oxidase	maturation	protein	cbb3-type
7TMR-HDED	PF07697.6	gi|449066242|ref|YP_007433324.1|	-	0.032	13.9	7.3	0.047	13.4	5.1	1.2	1	0	0	1	1	1	0	7TM-HD	extracellular
DUF2746	PF10874.3	gi|449066242|ref|YP_007433324.1|	-	0.078	13.1	0.1	1.6	8.9	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2746)
LETM1	PF07766.8	gi|449066242|ref|YP_007433324.1|	-	0.1	11.5	1.4	0.13	11.2	1.0	1.1	1	0	0	1	1	1	0	LETM1-like	protein
SPT16	PF08644.6	gi|449066242|ref|YP_007433324.1|	-	1.3	8.8	5.8	1.8	8.4	4.0	1.2	1	0	0	1	1	1	0	FACT	complex	subunit	(SPT16/CDC68)
Ndc1_Nup	PF09531.5	gi|449066242|ref|YP_007433324.1|	-	1.9	6.7	5.8	2.4	6.4	4.0	1.1	1	0	0	1	1	1	0	Nucleoporin	protein	Ndc1-Nup
Smac_DIABLO	PF09057.5	gi|449066242|ref|YP_007433324.1|	-	2.2	7.3	6.5	3	6.9	4.5	1.1	1	0	0	1	1	1	0	Second	Mitochondria-derived	Activator	of	Caspases
CbiA	PF01656.18	gi|449066243|ref|YP_007433325.1|	-	2.2e-27	95.7	0.1	2.7e-27	95.4	0.1	1.1	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
MipZ	PF09140.6	gi|449066243|ref|YP_007433325.1|	-	2.9e-12	46.2	0.0	3.7e-12	45.8	0.0	1.2	1	0	0	1	1	1	1	ATPase	MipZ
AAA_31	PF13614.1	gi|449066243|ref|YP_007433325.1|	-	3.2e-10	40.1	0.0	2e-06	27.7	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
ArsA_ATPase	PF02374.10	gi|449066243|ref|YP_007433325.1|	-	1.6e-06	27.4	0.1	0.00016	20.8	0.0	2.2	2	0	0	2	2	2	2	Anion-transporting	ATPase
ParA	PF10609.4	gi|449066243|ref|YP_007433325.1|	-	0.0038	17.0	0.1	0.0067	16.2	0.1	1.4	1	0	0	1	1	1	1	ParA/MinD	ATPase	like
Fer4_NifH	PF00142.13	gi|449066243|ref|YP_007433325.1|	-	0.016	14.3	0.1	0.036	13.2	0.1	1.6	1	0	0	1	1	1	0	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
RuvB_N	PF05496.7	gi|449066243|ref|YP_007433325.1|	-	0.038	13.0	0.3	0.094	11.7	0.0	1.8	2	1	1	3	3	3	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
YhjQ	PF06564.7	gi|449066243|ref|YP_007433325.1|	-	0.047	13.0	0.0	2.2	7.5	0.0	2.1	2	0	0	2	2	2	0	YhjQ	protein
VirC1	PF07015.6	gi|449066243|ref|YP_007433325.1|	-	0.11	11.5	0.1	0.21	10.6	0.0	1.4	1	0	0	1	1	1	0	VirC1	protein
CCG	PF02754.11	gi|449066244|ref|YP_007433326.1|	-	4.4e-13	49.0	0.2	2.4e-05	24.2	0.1	2.6	2	0	0	2	2	2	2	Cysteine-rich	domain
Fer4_8	PF13183.1	gi|449066244|ref|YP_007433326.1|	-	2e-11	43.7	6.0	4.5e-11	42.6	4.1	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|449066244|ref|YP_007433326.1|	-	5.6e-10	39.4	7.0	1.2e-09	38.3	4.8	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|449066244|ref|YP_007433326.1|	-	8.8e-10	38.7	5.2	1.9e-09	37.6	3.6	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|449066244|ref|YP_007433326.1|	-	4.6e-07	29.1	11.0	0.0012	18.3	1.4	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|449066244|ref|YP_007433326.1|	-	2.2e-06	27.3	7.8	2.9e-05	23.7	6.3	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|449066244|ref|YP_007433326.1|	-	3.5e-06	26.6	10.9	0.011	15.6	1.7	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|449066244|ref|YP_007433326.1|	-	3e-05	24.3	9.1	0.022	15.1	0.6	2.6	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|449066244|ref|YP_007433326.1|	-	7.9e-05	22.8	10.4	0.00085	19.5	7.5	2.4	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|449066244|ref|YP_007433326.1|	-	0.00035	20.6	12.3	0.1	13.0	1.8	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|449066244|ref|YP_007433326.1|	-	0.00079	19.2	13.5	0.011	15.5	1.5	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|449066244|ref|YP_007433326.1|	-	0.015	15.7	16.1	0.74	10.5	2.6	2.8	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|449066244|ref|YP_007433326.1|	-	0.025	15.2	10.2	0.69	10.6	7.5	2.5	1	1	1	2	2	2	0	4Fe-4S	double	cluster	binding	domain
DUF2102	PF09875.4	gi|449066244|ref|YP_007433326.1|	-	0.11	12.0	0.1	0.48	9.9	0.1	1.9	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2102)
Fer4_21	PF14697.1	gi|449066244|ref|YP_007433326.1|	-	0.14	12.0	12.9	2.1	8.2	9.1	2.4	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|449066244|ref|YP_007433326.1|	-	0.3	11.7	3.7	12	6.5	0.2	2.5	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.1	gi|449066244|ref|YP_007433326.1|	-	1.7	9.1	5.6	13	6.2	0.2	2.4	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
FAD-oxidase_C	PF02913.14	gi|449066245|ref|YP_007433327.1|	-	2.3e-49	167.9	0.0	3.4e-49	167.4	0.0	1.2	1	0	0	1	1	1	1	FAD	linked	oxidases,	C-terminal	domain
FAD_binding_4	PF01565.18	gi|449066245|ref|YP_007433327.1|	-	1.8e-29	101.9	0.2	2.7e-29	101.3	0.1	1.3	1	0	0	1	1	1	1	FAD	binding	domain
FAD_binding_4	PF01565.18	gi|449066246|ref|YP_007433328.1|	-	6.4e-17	61.3	0.0	9.6e-17	60.7	0.0	1.2	1	0	0	1	1	1	1	FAD	binding	domain
TPP_enzyme_C	PF02775.16	gi|449066247|ref|YP_007433329.1|	-	1.1e-32	112.6	0.4	5.7e-32	110.4	0.0	1.9	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
PFO_beta_C	PF12367.3	gi|449066247|ref|YP_007433329.1|	-	1.6e-15	56.8	1.0	5.7e-15	54.9	0.7	1.9	1	1	0	1	1	1	1	Pyruvate	ferredoxin	oxidoreductase	beta	subunit	C	terminal
POR_N	PF01855.14	gi|449066248|ref|YP_007433330.1|	-	5.1e-62	209.3	0.3	4.1e-61	206.4	0.0	2.0	2	0	0	2	2	2	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
POR	PF01558.13	gi|449066248|ref|YP_007433330.1|	-	2.3e-34	118.7	0.7	6.3e-34	117.3	0.5	1.7	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
TPP_enzyme_N	PF02776.13	gi|449066248|ref|YP_007433330.1|	-	0.00073	19.0	1.8	0.0043	16.5	0.6	2.4	2	1	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
DUF552	PF04472.7	gi|449066249|ref|YP_007433331.1|	-	0.018	14.9	0.0	0.071	13.0	0.0	2.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF552)
CN_hydrolase	PF00795.17	gi|449066250|ref|YP_007433332.1|	-	5.9e-12	45.3	0.0	3.2e-11	42.9	0.0	1.9	1	1	0	1	1	1	1	Carbon-nitrogen	hydrolase
CBS	PF00571.23	gi|449066251|ref|YP_007433333.1|	-	2.1e-43	145.8	3.4	3.1e-13	49.2	0.0	4.3	4	0	0	4	4	4	4	CBS	domain
Ribosomal_S30AE	PF02482.14	gi|449066251|ref|YP_007433333.1|	-	5.9e-07	29.8	2.7	1.6e-06	28.4	1.8	1.8	1	1	0	1	1	1	1	Sigma	54	modulation	protein	/	S30EA	ribosomal	protein
PBP5_C	PF07943.8	gi|449066251|ref|YP_007433333.1|	-	0.11	12.5	1.1	0.31	11.0	0.0	2.3	2	1	1	3	3	3	0	Penicillin-binding	protein	5,	C-terminal	domain
Hist_deacetyl	PF00850.14	gi|449066252|ref|YP_007433334.1|	-	3.1e-73	246.8	0.0	3.8e-73	246.5	0.0	1.0	1	0	0	1	1	1	1	Histone	deacetylase	domain
PSP1	PF04468.7	gi|449066252|ref|YP_007433334.1|	-	0.09	12.7	0.0	0.2	11.6	0.0	1.5	1	0	0	1	1	1	0	PSP1	C-terminal	conserved	region
ATP-grasp	PF02222.17	gi|449066253|ref|YP_007433335.1|	-	5.2e-43	146.3	0.1	1e-42	145.4	0.1	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|449066253|ref|YP_007433335.1|	-	5.3e-20	71.9	0.1	1.3e-19	70.6	0.0	1.6	2	0	0	2	2	2	1	ATP-grasp	domain
CPSase_L_D2	PF02786.12	gi|449066253|ref|YP_007433335.1|	-	5.8e-11	42.0	0.1	1.5e-10	40.6	0.0	1.7	2	0	0	2	2	2	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Dala_Dala_lig_C	PF07478.8	gi|449066253|ref|YP_007433335.1|	-	8.9e-11	41.5	0.1	1.9e-10	40.5	0.0	1.5	1	0	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
ATPgrasp_Ter	PF15632.1	gi|449066253|ref|YP_007433335.1|	-	3.5e-09	35.8	0.0	2.7e-06	26.3	0.0	2.1	2	0	0	2	2	2	2	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp_3	PF02655.9	gi|449066253|ref|YP_007433335.1|	-	5.6e-07	29.5	0.4	2.8e-06	27.3	0.3	2.1	1	1	0	1	1	1	1	ATP-grasp	domain
RimK	PF08443.6	gi|449066253|ref|YP_007433335.1|	-	7.9e-07	28.7	0.3	0.00015	21.3	0.0	2.9	3	0	0	3	3	3	1	RimK-like	ATP-grasp	domain
GARS_A	PF01071.14	gi|449066253|ref|YP_007433335.1|	-	3.6e-06	26.6	0.2	3.1e-05	23.6	0.0	2.2	2	0	0	2	2	2	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
LAP2alpha	PF11560.3	gi|449066253|ref|YP_007433335.1|	-	0.087	11.9	0.0	0.14	11.3	0.0	1.3	1	0	0	1	1	1	0	Lamina-associated	polypeptide	2	alpha
Pyr_redox	PF00070.22	gi|449066253|ref|YP_007433335.1|	-	0.11	12.9	3.1	5.6	7.4	0.2	3.4	2	1	1	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
DUF4143	PF13635.1	gi|449066254|ref|YP_007433336.1|	-	0.0008	19.5	0.1	0.0011	19.0	0.0	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
PRA1	PF03208.14	gi|449066255|ref|YP_007433337.1|	-	0.032	13.5	0.8	0.032	13.5	0.5	2.2	2	1	1	3	3	3	0	PRA1	family	protein
Claudin_2	PF13903.1	gi|449066255|ref|YP_007433337.1|	-	0.15	11.7	3.4	0.34	10.5	2.3	1.5	1	0	0	1	1	1	0	PMP-22/EMP/MP20/Claudin	tight	junction
DAO	PF01266.19	gi|449066258|ref|YP_007433340.1|	-	2.3e-14	53.0	0.0	3.1e-07	29.6	0.0	2.1	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.9	gi|449066258|ref|YP_007433340.1|	-	0.02	14.7	0.0	0.072	12.9	0.0	1.8	1	1	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
3HCDH_N	PF02737.13	gi|449066258|ref|YP_007433340.1|	-	0.033	13.8	0.0	0.056	13.0	0.0	1.3	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_8	PF13450.1	gi|449066258|ref|YP_007433340.1|	-	0.033	14.1	0.1	0.11	12.5	0.1	1.9	2	0	0	2	2	2	0	NAD(P)-binding	Rossmann-like	domain
TrkA_N	PF02254.13	gi|449066258|ref|YP_007433340.1|	-	0.057	13.4	0.1	0.11	12.4	0.1	1.5	1	0	0	1	1	1	0	TrkA-N	domain
ApbA	PF02558.11	gi|449066258|ref|YP_007433340.1|	-	0.13	11.6	0.1	0.34	10.3	0.0	1.7	2	0	0	2	2	2	0	Ketopantoate	reductase	PanE/ApbA
MoCF_biosynth	PF00994.19	gi|449066260|ref|YP_007433342.1|	-	8.3e-31	106.3	0.1	9.5e-31	106.1	0.1	1.0	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
DUF1286	PF06939.6	gi|449066261|ref|YP_007433343.1|	-	1.5e-41	141.1	5.6	2.2e-41	140.6	3.9	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1286)
DUF457	PF04307.9	gi|449066261|ref|YP_007433343.1|	-	1.9e-05	24.0	10.6	2.6e-05	23.6	3.5	2.0	1	1	1	2	2	2	2	Predicted	membrane-bound	metal-dependent	hydrolase	(DUF457)
ATP_synt_I	PF03899.10	gi|449066261|ref|YP_007433343.1|	-	0.025	14.7	5.4	0.032	14.3	0.7	2.4	2	1	0	2	2	2	0	ATP	synthase	I	chain
PaREP1	PF05942.6	gi|449066262|ref|YP_007433344.1|	-	7.6e-23	80.5	1.6	8.5e-23	80.4	1.1	1.0	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
IF2_N	PF04760.10	gi|449066262|ref|YP_007433344.1|	-	0.12	12.0	1.5	0.34	10.6	0.1	2.2	2	1	0	2	2	2	0	Translation	initiation	factor	IF-2,	N-terminal	region
CDC48_2	PF02933.12	gi|449066262|ref|YP_007433344.1|	-	0.13	11.9	0.0	0.17	11.5	0.0	1.2	1	0	0	1	1	1	0	Cell	division	protein	48	(CDC48),	domain	2
PaREP1	PF05942.6	gi|449066263|ref|YP_007433345.1|	-	2.7e-24	85.2	2.2	3.1e-24	85.0	1.5	1.1	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
DUF3350	PF11830.3	gi|449066263|ref|YP_007433345.1|	-	0.084	12.9	0.0	0.16	12.0	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3350)
HARE-HTH	PF05066.8	gi|449066263|ref|YP_007433345.1|	-	0.098	13.0	0.4	0.19	12.0	0.3	1.5	1	0	0	1	1	1	0	HB1,	ASXL,	restriction	endonuclease	HTH	domain
DHDPS	PF00701.17	gi|449066265|ref|YP_007433347.1|	-	4.7e-40	136.9	0.0	5.4e-40	136.8	0.0	1.0	1	0	0	1	1	1	1	Dihydrodipicolinate	synthetase	family
PfkB	PF00294.19	gi|449066266|ref|YP_007433348.1|	-	6.5e-39	133.8	0.0	7.6e-39	133.6	0.0	1.0	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Aldedh	PF00171.17	gi|449066267|ref|YP_007433349.1|	-	2.5e-111	372.2	0.0	3e-111	372.0	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
LuxC	PF05893.9	gi|449066267|ref|YP_007433349.1|	-	1.5e-08	33.8	0.0	2.5e-08	33.0	0.0	1.3	1	0	0	1	1	1	1	Acyl-CoA	reductase	(LuxC)
Rieske	PF00355.21	gi|449066268|ref|YP_007433350.1|	-	4.2e-09	35.8	0.0	5.2e-09	35.5	0.0	1.1	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Rieske_2	PF13806.1	gi|449066268|ref|YP_007433350.1|	-	0.013	15.2	0.0	0.015	14.9	0.0	1.1	1	0	0	1	1	1	0	Rieske-like	[2Fe-2S]	domain
MS_channel	PF00924.13	gi|449066271|ref|YP_007433353.1|	-	3e-27	95.3	3.1	3e-27	95.3	2.2	1.8	2	0	0	2	2	2	1	Mechanosensitive	ion	channel
CwfJ_C_2	PF04676.9	gi|449066271|ref|YP_007433353.1|	-	0.043	14.3	0.2	0.078	13.4	0.2	1.4	1	0	0	1	1	1	0	Protein	similar	to	CwfJ	C-terminus	2
PHO4	PF01384.15	gi|449066271|ref|YP_007433353.1|	-	0.8	8.2	8.1	1.2	7.7	5.7	1.5	1	1	0	1	1	1	0	Phosphate	transporter	family
DUF2975	PF11188.3	gi|449066271|ref|YP_007433353.1|	-	4.9	6.8	13.0	15	5.2	9.0	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2975)
Linocin_M18	PF04454.7	gi|449066272|ref|YP_007433354.1|	-	2.5e-36	124.8	0.1	3.5e-36	124.3	0.1	1.2	1	0	0	1	1	1	1	Encapsulating	protein	for	peroxidase
Rubrerythrin	PF02915.12	gi|449066272|ref|YP_007433354.1|	-	0.0022	18.3	1.4	0.0022	18.3	1.0	2.0	2	0	0	2	2	2	1	Rubrerythrin
Ferritin	PF00210.19	gi|449066272|ref|YP_007433354.1|	-	0.025	14.3	2.2	0.048	13.4	1.5	1.6	1	1	0	1	1	1	0	Ferritin-like	domain
DUF340	PF03956.8	gi|449066274|ref|YP_007433356.1|	-	4.2e-51	172.9	19.5	4.2e-51	172.9	13.5	2.0	2	0	0	2	2	2	1	Membrane	protein	of	unknown	function	(DUF340)
DUF3270	PF11674.3	gi|449066274|ref|YP_007433356.1|	-	0.15	12.1	0.3	0.15	12.1	0.2	2.8	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3270)
MFS_1	PF07690.11	gi|449066275|ref|YP_007433357.1|	-	1.4e-42	145.6	78.7	3.4e-38	131.2	29.5	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
DUF2031	PF09592.5	gi|449066275|ref|YP_007433357.1|	-	0.028	13.5	0.1	0.07	12.2	0.1	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2031)
CheC	PF04509.7	gi|449066276|ref|YP_007433358.1|	-	0.066	12.9	0.2	0.12	12.1	0.1	1.5	1	0	0	1	1	1	0	CheC-like	family
PmbA_TldD	PF01523.11	gi|449066277|ref|YP_007433359.1|	-	2.6e-14	53.2	0.0	4.5e-14	52.4	0.0	1.4	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
DUF1827	PF08860.5	gi|449066277|ref|YP_007433359.1|	-	0.073	13.1	0.1	0.15	12.1	0.1	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1827)
Nuc_N	PF14448.1	gi|449066277|ref|YP_007433359.1|	-	0.13	11.7	0.0	0.33	10.5	0.0	1.7	1	0	0	1	1	1	0	Nuclease	N	terminal
adh_short_C2	PF13561.1	gi|449066278|ref|YP_007433360.1|	-	3e-32	112.3	0.1	3.8e-32	111.9	0.1	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|449066278|ref|YP_007433360.1|	-	4.8e-32	111.1	0.0	7.9e-32	110.4	0.0	1.3	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|449066278|ref|YP_007433360.1|	-	2.1e-12	47.0	0.0	3.1e-12	46.5	0.0	1.2	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.16	gi|449066278|ref|YP_007433360.1|	-	2.3e-06	27.2	0.2	4.1e-06	26.3	0.1	1.5	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
3Beta_HSD	PF01073.14	gi|449066278|ref|YP_007433360.1|	-	4.3e-05	22.3	0.3	5.7e-05	21.9	0.2	1.2	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
NAD_binding_4	PF07993.7	gi|449066278|ref|YP_007433360.1|	-	0.00022	20.2	0.2	0.00047	19.1	0.1	1.5	1	1	0	1	1	1	1	Male	sterility	protein
Polysacc_synt_2	PF02719.10	gi|449066278|ref|YP_007433360.1|	-	0.0004	19.3	0.5	0.00046	19.1	0.4	1.1	1	0	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_10	PF13460.1	gi|449066278|ref|YP_007433360.1|	-	0.00072	19.6	0.0	0.00097	19.1	0.0	1.3	1	0	0	1	1	1	1	NADH(P)-binding
NmrA	PF05368.8	gi|449066278|ref|YP_007433360.1|	-	0.0031	16.8	0.6	0.0056	15.9	0.4	1.4	1	0	0	1	1	1	1	NmrA-like	family
THF_DHG_CYH_C	PF02882.14	gi|449066278|ref|YP_007433360.1|	-	0.0049	15.9	0.2	0.18	10.8	0.0	2.4	1	1	1	2	2	2	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
TrkA_N	PF02254.13	gi|449066278|ref|YP_007433360.1|	-	0.0084	16.1	0.2	0.021	14.8	0.1	1.7	2	0	0	2	2	2	1	TrkA-N	domain
2-Hacid_dh_C	PF02826.14	gi|449066278|ref|YP_007433360.1|	-	0.011	14.8	0.2	0.024	13.7	0.2	1.7	1	1	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
DFP	PF04127.10	gi|449066278|ref|YP_007433360.1|	-	0.032	13.8	0.4	0.069	12.7	0.2	1.6	1	1	1	2	2	2	0	DNA	/	pantothenate	metabolism	flavoprotein
HAD_2	PF13419.1	gi|449066279|ref|YP_007433361.1|	-	1.2e-16	61.3	0.0	1.8e-16	60.8	0.0	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|449066279|ref|YP_007433361.1|	-	2e-06	28.3	0.0	2.4e-06	28.1	0.0	1.3	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
LisH	PF08513.6	gi|449066279|ref|YP_007433361.1|	-	0.00037	20.1	2.1	0.021	14.5	0.2	2.6	2	0	0	2	2	2	1	LisH
Hydrolase_like	PF13242.1	gi|449066279|ref|YP_007433361.1|	-	0.0035	17.0	0.0	0.0062	16.2	0.0	1.4	1	0	0	1	1	1	1	HAD-hyrolase-like
Hydrolase_6	PF13344.1	gi|449066279|ref|YP_007433361.1|	-	0.022	14.6	0.0	0.042	13.7	0.0	1.5	1	0	0	1	1	1	0	Haloacid	dehalogenase-like	hydrolase
HAD	PF12710.2	gi|449066279|ref|YP_007433361.1|	-	0.037	14.2	0.0	0.039	14.1	0.0	1.2	1	0	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
Radical_SAM	PF04055.16	gi|449066280|ref|YP_007433362.1|	-	5.2e-20	72.2	0.0	6.3e-18	65.4	0.0	2.9	3	0	0	3	3	3	1	Radical	SAM	superfamily
B12-binding	PF02310.14	gi|449066280|ref|YP_007433362.1|	-	9.2e-05	22.3	0.0	0.00018	21.3	0.0	1.4	1	0	0	1	1	1	1	B12	binding	domain
Fer4_14	PF13394.1	gi|449066280|ref|YP_007433362.1|	-	0.018	15.1	0.0	2.2	8.3	0.0	2.5	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
DUF3916	PF13079.1	gi|449066280|ref|YP_007433362.1|	-	0.021	14.4	0.3	0.041	13.5	0.2	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3916)
DUF3681	PF12442.3	gi|449066281|ref|YP_007433363.1|	-	0.01	15.9	1.7	0.01	15.9	1.2	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3681)
Yip1	PF04893.12	gi|449066281|ref|YP_007433363.1|	-	0.16	11.4	26.8	0.26	10.7	18.6	1.3	1	1	0	1	1	1	0	Yip1	domain
DUF1129	PF06570.6	gi|449066281|ref|YP_007433363.1|	-	3.3	6.9	15.7	6	6.1	9.4	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1129)
Cation_efflux	PF01545.16	gi|449066282|ref|YP_007433364.1|	-	1.3e-40	139.2	13.9	1.4e-40	139.1	9.6	1.0	1	0	0	1	1	1	1	Cation	efflux	family
L6_membrane	PF05805.7	gi|449066282|ref|YP_007433364.1|	-	0.062	12.8	5.4	0.14	11.6	2.8	2.0	1	1	1	2	2	2	0	L6	membrane	protein
Citrate_synt	PF00285.16	gi|449066283|ref|YP_007433365.1|	-	3.4e-99	331.9	0.0	3.9e-99	331.7	0.0	1.0	1	0	0	1	1	1	1	Citrate	synthase
DUF4325	PF14213.1	gi|449066283|ref|YP_007433365.1|	-	0.055	13.1	0.3	11	5.7	0.0	3.1	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4325)
CBS	PF00571.23	gi|449066284|ref|YP_007433366.1|	-	0.021	14.6	0.0	0.024	14.4	0.0	1.2	1	0	0	1	1	1	0	CBS	domain
FGF	PF00167.13	gi|449066284|ref|YP_007433366.1|	-	0.1	12.4	0.1	0.11	12.2	0.0	1.1	1	0	0	1	1	1	0	Fibroblast	growth	factor
PEP_mutase	PF13714.1	gi|449066285|ref|YP_007433367.1|	-	1.2e-59	201.4	0.1	1.4e-59	201.2	0.1	1.0	1	0	0	1	1	1	1	Phosphoenolpyruvate	phosphomutase
ICL	PF00463.16	gi|449066285|ref|YP_007433367.1|	-	1e-16	60.2	0.8	2e-16	59.3	0.6	1.4	1	1	0	1	1	1	1	Isocitrate	lyase	family
ComA	PF02679.10	gi|449066285|ref|YP_007433367.1|	-	0.0018	17.3	0.1	0.0043	16.1	0.1	1.7	1	0	0	1	1	1	1	(2R)-phospho-3-sulfolactate	synthase	(ComA)
Pantoate_transf	PF02548.10	gi|449066285|ref|YP_007433367.1|	-	0.024	13.7	0.1	0.24	10.4	0.1	2.2	1	1	1	2	2	2	0	Ketopantoate	hydroxymethyltransferase
MmgE_PrpD	PF03972.9	gi|449066286|ref|YP_007433368.1|	-	9.2e-97	324.0	0.0	1.1e-96	323.7	0.0	1.0	1	0	0	1	1	1	1	MmgE/PrpD	family
CPSase_L_D3	PF02787.14	gi|449066286|ref|YP_007433368.1|	-	0.0084	15.8	0.1	0.023	14.4	0.0	1.7	2	0	0	2	2	2	1	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
IF2_N	PF04760.10	gi|449066286|ref|YP_007433368.1|	-	0.027	14.1	2.8	0.069	12.8	0.3	2.6	2	0	0	2	2	2	0	Translation	initiation	factor	IF-2,	N-terminal	region
Ldh_1_N	PF00056.18	gi|449066287|ref|YP_007433369.1|	-	1.5e-33	115.5	0.4	2.8e-33	114.7	0.3	1.4	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	NAD	binding	domain
Ldh_1_C	PF02866.13	gi|449066287|ref|YP_007433369.1|	-	3.6e-11	43.0	0.1	5.5e-11	42.5	0.1	1.2	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	alpha/beta	C-terminal	domain
NAD_Gly3P_dh_N	PF01210.18	gi|449066287|ref|YP_007433369.1|	-	0.00014	21.6	0.2	0.0088	15.7	0.0	2.7	2	1	0	3	3	3	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
F420_oxidored	PF03807.12	gi|449066287|ref|YP_007433369.1|	-	0.00047	20.5	0.1	0.002	18.5	0.0	2.2	1	1	1	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_2	PF03446.10	gi|449066287|ref|YP_007433369.1|	-	0.00073	19.4	0.0	0.003	17.4	0.0	2.1	1	1	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
3HCDH_N	PF02737.13	gi|449066287|ref|YP_007433369.1|	-	0.0018	17.9	0.0	0.0042	16.7	0.0	1.6	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
DapB_N	PF01113.15	gi|449066287|ref|YP_007433369.1|	-	0.06	13.2	0.1	2.3	8.1	0.0	2.6	2	0	0	2	2	2	0	Dihydrodipicolinate	reductase,	N-terminus
TrkA_N	PF02254.13	gi|449066287|ref|YP_007433369.1|	-	0.069	13.1	0.3	0.17	11.8	0.0	1.9	2	0	0	2	2	2	0	TrkA-N	domain
RuvA_C	PF07499.8	gi|449066287|ref|YP_007433369.1|	-	0.1	12.7	2.0	0.9	9.7	0.1	3.1	3	1	0	3	3	3	0	RuvA,	C-terminal	domain
2-Hacid_dh_C	PF02826.14	gi|449066288|ref|YP_007433370.1|	-	3.2e-32	111.1	0.0	4.7e-32	110.5	0.0	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.25	gi|449066288|ref|YP_007433370.1|	-	2.6e-10	39.8	0.0	3.2e-10	39.5	0.0	1.1	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
AdoHcyase_NAD	PF00670.16	gi|449066288|ref|YP_007433370.1|	-	0.00067	19.5	0.1	0.0011	18.8	0.0	1.3	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
EVE	PF01878.13	gi|449066289|ref|YP_007433371.1|	-	4.5e-17	62.4	0.0	5.1e-17	62.2	0.0	1.1	1	0	0	1	1	1	1	EVE	domain
Aminotran_5	PF00266.14	gi|449066290|ref|YP_007433372.1|	-	5.8e-37	127.3	0.0	7.4e-37	126.9	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-V
B12-binding	PF02310.14	gi|449066290|ref|YP_007433372.1|	-	0.022	14.6	0.0	0.056	13.3	0.0	1.7	1	0	0	1	1	1	0	B12	binding	domain
Nitroreductase	PF00881.19	gi|449066291|ref|YP_007433373.1|	-	1.3e-29	103.0	0.0	1.8e-29	102.6	0.0	1.2	1	0	0	1	1	1	1	Nitroreductase	family
Tmemb_9	PF05434.6	gi|449066291|ref|YP_007433373.1|	-	0.056	13.1	0.9	0.084	12.6	0.6	1.2	1	0	0	1	1	1	0	TMEM9
TM1586_NiRdase	PF14512.1	gi|449066291|ref|YP_007433373.1|	-	0.12	11.5	0.5	5.5	6.1	0.0	2.7	1	1	1	2	2	2	0	Putative	TM	nitroreductase
PspB	PF06667.7	gi|449066291|ref|YP_007433373.1|	-	0.13	12.2	0.2	0.26	11.2	0.2	1.4	1	0	0	1	1	1	0	Phage	shock	protein	B
TraL	PF07178.6	gi|449066292|ref|YP_007433374.1|	-	0.4	10.7	2.3	0.26	11.3	0.4	1.6	1	1	1	2	2	2	0	TraL	protein
Aconitase_C	PF00694.14	gi|449066293|ref|YP_007433375.1|	-	2.2e-22	79.5	0.0	3e-22	79.1	0.0	1.3	1	0	0	1	1	1	1	Aconitase	C-terminal	domain
Aconitase_2_N	PF06434.8	gi|449066293|ref|YP_007433375.1|	-	0.00031	20.2	2.1	0.016	14.6	1.5	2.2	1	1	0	1	1	1	1	Aconitate	hydratase	2	N-terminus
IlvN	PF07991.7	gi|449066293|ref|YP_007433375.1|	-	0.0028	17.0	0.1	0.0041	16.5	0.1	1.2	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
Sipho_tail	PF05709.6	gi|449066293|ref|YP_007433375.1|	-	0.021	13.9	0.0	0.023	13.8	0.0	1.0	1	0	0	1	1	1	0	Phage	tail	protein
Aconitase	PF00330.15	gi|449066294|ref|YP_007433376.1|	-	3.7e-68	230.0	0.2	5.5e-42	143.8	0.0	2.3	1	1	1	2	2	2	2	Aconitase	family	(aconitate	hydratase)
DUF521	PF04412.8	gi|449066294|ref|YP_007433376.1|	-	0.00013	20.6	0.0	0.00022	19.8	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF521)
TatC	PF00902.13	gi|449066295|ref|YP_007433377.1|	-	1.7e-45	155.0	23.4	2.2e-45	154.7	16.2	1.2	1	0	0	1	1	1	1	Sec-independent	protein	translocase	protein	(TatC)
FadA	PF09403.5	gi|449066296|ref|YP_007433378.1|	-	0.004	17.1	2.8	0.0074	16.2	2.0	1.4	1	1	0	1	1	1	1	Adhesion	protein	FadA
Syntaxin-6_N	PF09177.6	gi|449066296|ref|YP_007433378.1|	-	0.0073	16.6	4.7	0.013	15.9	3.2	1.4	1	1	0	1	1	1	1	Syntaxin	6,	N-terminal
SAB	PF04382.8	gi|449066296|ref|YP_007433378.1|	-	0.01	15.5	3.7	0.054	13.1	0.1	2.6	2	1	0	2	2	2	0	SAB	domain
Lipoprotein_6	PF01441.14	gi|449066296|ref|YP_007433378.1|	-	0.011	15.6	1.0	0.014	15.2	0.7	1.2	1	0	0	1	1	1	0	Lipoprotein
ATG16	PF08614.6	gi|449066296|ref|YP_007433378.1|	-	0.011	15.5	2.4	0.015	15.1	1.7	1.2	1	0	0	1	1	1	0	Autophagy	protein	16	(ATG16)
Snapin_Pallidin	PF14712.1	gi|449066296|ref|YP_007433378.1|	-	0.012	15.8	3.1	0.57	10.5	0.1	2.1	2	0	0	2	2	2	0	Snapin/Pallidin
DUF632	PF04782.7	gi|449066296|ref|YP_007433378.1|	-	0.014	14.4	0.2	0.02	13.9	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF632)
GAS	PF13851.1	gi|449066296|ref|YP_007433378.1|	-	0.018	14.2	8.8	0.025	13.7	6.1	1.2	1	0	0	1	1	1	0	Growth-arrest	specific	micro-tubule	binding
DUF939_C	PF11728.3	gi|449066296|ref|YP_007433378.1|	-	0.019	14.8	4.9	0.066	13.0	2.8	1.9	1	1	1	2	2	2	0	DUF939	C-terminal	domain
PspA_IM30	PF04012.7	gi|449066296|ref|YP_007433378.1|	-	0.035	13.4	1.1	0.66	9.3	0.1	2.0	2	0	0	2	2	2	0	PspA/IM30	family
YcbB	PF08664.5	gi|449066296|ref|YP_007433378.1|	-	0.039	13.7	2.4	0.23	11.2	1.7	1.8	1	1	0	1	1	1	0	YcbB	domain
WD40_alt	PF14077.1	gi|449066296|ref|YP_007433378.1|	-	0.04	13.5	1.6	0.04	13.5	1.1	2.2	2	1	0	2	2	2	0	Alternative	WD40	repeat	motif
FlxA	PF14282.1	gi|449066296|ref|YP_007433378.1|	-	0.059	13.3	2.9	0.064	13.2	0.2	2.0	1	1	1	2	2	2	0	FlxA-like	protein
ACR_tran	PF00873.14	gi|449066296|ref|YP_007433378.1|	-	0.063	10.6	0.2	0.074	10.4	0.2	1.1	1	0	0	1	1	1	0	AcrB/AcrD/AcrF	family
Mt_ATP-synt_D	PF05873.7	gi|449066296|ref|YP_007433378.1|	-	0.069	12.7	2.6	0.13	11.8	1.8	1.5	1	1	0	1	1	1	0	ATP	synthase	D	chain,	mitochondrial	(ATP5H)
HSBP1	PF06825.7	gi|449066296|ref|YP_007433378.1|	-	0.071	12.7	1.0	0.071	12.7	0.7	1.7	2	0	0	2	2	1	0	Heat	shock	factor	binding	protein	1
UPF0118	PF01594.11	gi|449066296|ref|YP_007433378.1|	-	0.071	12.0	0.2	0.11	11.4	0.1	1.4	1	1	1	2	2	2	0	Domain	of	unknown	function	DUF20
DUF3338	PF11819.3	gi|449066296|ref|YP_007433378.1|	-	0.072	12.5	1.9	0.35	10.3	0.0	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3338)
GreA_GreB_N	PF03449.10	gi|449066296|ref|YP_007433378.1|	-	0.073	13.1	3.0	0.17	11.9	0.3	2.2	2	0	0	2	2	2	0	Transcription	elongation	factor,	N-terminal
STAT_alpha	PF01017.15	gi|449066296|ref|YP_007433378.1|	-	0.077	12.7	0.8	0.87	9.2	0.1	2.0	2	0	0	2	2	2	0	STAT	protein,	all-alpha	domain
PhaP_Bmeg	PF09602.5	gi|449066296|ref|YP_007433378.1|	-	0.08	12.7	1.3	0.1	12.4	0.9	1.2	1	0	0	1	1	1	0	Polyhydroxyalkanoic	acid	inclusion	protein	(PhaP_Bmeg)
MCPsignal	PF00015.16	gi|449066296|ref|YP_007433378.1|	-	0.08	12.4	1.3	0.23	10.9	0.8	1.6	1	1	0	1	1	1	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
Cob_adeno_trans	PF01923.13	gi|449066296|ref|YP_007433378.1|	-	0.083	12.6	0.4	0.12	12.1	0.3	1.2	1	0	0	1	1	1	0	Cobalamin	adenosyltransferase
UPF0449	PF15136.1	gi|449066296|ref|YP_007433378.1|	-	0.088	13.0	1.2	0.97	9.6	0.1	2.0	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0449
DUF948	PF06103.6	gi|449066296|ref|YP_007433378.1|	-	0.09	12.6	2.8	0.94	9.3	0.4	2.2	1	1	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
Fib_alpha	PF08702.5	gi|449066296|ref|YP_007433378.1|	-	0.098	12.7	6.0	0.15	12.2	4.2	1.2	1	0	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
Vps51	PF08700.6	gi|449066296|ref|YP_007433378.1|	-	0.1	12.4	1.4	1.5	8.7	0.1	2.3	2	0	0	2	2	2	0	Vps51/Vps67
Cep57_MT_bd	PF06657.8	gi|449066296|ref|YP_007433378.1|	-	0.12	12.3	1.3	0.72	9.8	0.2	2.1	2	0	0	2	2	2	0	Centrosome	microtubule-binding	domain	of	Cep57
Sugarporin_N	PF11471.3	gi|449066296|ref|YP_007433378.1|	-	0.12	12.0	4.3	0.41	10.3	3.0	1.8	1	0	0	1	1	1	0	Maltoporin	periplasmic	N-terminal	extension
CENP-F_leu_zip	PF10473.4	gi|449066296|ref|YP_007433378.1|	-	0.13	12.0	5.9	0.24	11.2	0.8	2.1	2	0	0	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
DUF3368	PF11848.3	gi|449066296|ref|YP_007433378.1|	-	0.14	11.7	0.4	0.73	9.4	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3368)
MscS_porin	PF12795.2	gi|449066296|ref|YP_007433378.1|	-	0.15	11.3	2.3	0.67	9.2	1.6	1.7	1	1	0	1	1	1	0	Mechanosensitive	ion	channel	porin	domain
Occludin_ELL	PF07303.8	gi|449066296|ref|YP_007433378.1|	-	0.15	12.7	6.5	1.2	9.8	0.6	2.2	1	1	0	2	2	2	0	Occludin	homology	domain
AAA_13	PF13166.1	gi|449066296|ref|YP_007433378.1|	-	0.19	10.1	5.7	0.22	9.9	4.0	1.0	1	0	0	1	1	1	0	AAA	domain
Prefoldin_2	PF01920.15	gi|449066296|ref|YP_007433378.1|	-	0.19	11.4	8.0	0.4	10.4	5.6	1.5	1	1	0	1	1	1	0	Prefoldin	subunit
Baculo_PEP_C	PF04513.7	gi|449066296|ref|YP_007433378.1|	-	0.21	11.4	1.4	0.56	10.0	1.0	1.7	1	1	0	1	1	1	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Med21	PF11221.3	gi|449066296|ref|YP_007433378.1|	-	0.22	11.4	4.8	6.4	6.7	0.2	2.1	2	0	0	2	2	2	0	Subunit	21	of	Mediator	complex
DivIC	PF04977.10	gi|449066296|ref|YP_007433378.1|	-	0.23	10.9	10.6	0.68	9.4	1.1	2.3	1	1	1	2	2	2	0	Septum	formation	initiator
bZIP_1	PF00170.16	gi|449066296|ref|YP_007433378.1|	-	0.29	11.1	8.4	1.3	9.0	1.5	2.2	2	0	0	2	2	2	0	bZIP	transcription	factor
Mst1_SARAH	PF11629.3	gi|449066296|ref|YP_007433378.1|	-	0.3	10.9	4.3	6.7	6.6	0.1	2.4	2	0	0	2	2	2	0	C	terminal	SARAH	domain	of	Mst1
Rad50_zn_hook	PF04423.9	gi|449066296|ref|YP_007433378.1|	-	0.33	10.4	5.2	0.3	10.5	0.6	2.3	2	0	0	2	2	2	0	Rad50	zinc	hook	motif
DUF2408	PF10303.4	gi|449066296|ref|YP_007433378.1|	-	0.34	11.0	3.9	0.89	9.6	2.7	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2408)
ALIX_LYPXL_bnd	PF13949.1	gi|449066296|ref|YP_007433378.1|	-	0.36	9.7	6.0	0.17	10.7	0.4	2.0	1	1	1	2	2	2	0	ALIX	V-shaped	domain	binding	to	HIV
DUF484	PF04340.7	gi|449066296|ref|YP_007433378.1|	-	0.44	9.9	1.7	4.6	6.6	0.1	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function,	DUF484
TMF_DNA_bd	PF12329.3	gi|449066296|ref|YP_007433378.1|	-	0.46	10.3	10.1	0.51	10.1	1.5	2.2	2	0	0	2	2	2	0	TATA	element	modulatory	factor	1	DNA	binding
ORF6C	PF10552.4	gi|449066296|ref|YP_007433378.1|	-	0.58	9.9	4.7	2.8	7.6	0.5	2.4	2	1	0	2	2	2	0	ORF6C	domain
Pox_A_type_inc	PF04508.7	gi|449066296|ref|YP_007433378.1|	-	0.59	10.0	10.5	0.25	11.2	1.2	2.9	3	0	0	3	3	2	0	Viral	A-type	inclusion	protein	repeat
Imm3	PF14425.1	gi|449066296|ref|YP_007433378.1|	-	0.6	10.0	5.1	0.14	12.1	0.8	1.8	2	0	0	2	2	2	0	Immunity	protein	Imm3
V_ATPase_I	PF01496.14	gi|449066296|ref|YP_007433378.1|	-	0.61	7.8	4.8	0.91	7.2	3.3	1.3	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
Prefoldin	PF02996.12	gi|449066296|ref|YP_007433378.1|	-	0.66	9.6	7.6	2.7	7.6	0.5	2.1	2	0	0	2	2	2	0	Prefoldin	subunit
DUF4446	PF14584.1	gi|449066296|ref|YP_007433378.1|	-	0.7	9.7	4.8	0.57	9.9	0.4	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4446)
IFP_35_N	PF07334.8	gi|449066296|ref|YP_007433378.1|	-	1.1	9.3	3.8	0.54	10.2	0.3	2.0	2	0	0	2	2	2	0	Interferon-induced	35	kDa	protein	(IFP	35)	N-terminus
DUF241	PF03087.9	gi|449066296|ref|YP_007433378.1|	-	1.1	8.6	8.5	49	3.2	6.2	2.0	1	1	0	1	1	1	0	Arabidopsis	protein	of	unknown	function
Seryl_tRNA_N	PF02403.17	gi|449066296|ref|YP_007433378.1|	-	1.2	9.1	8.4	84	3.2	5.7	2.1	1	1	0	1	1	1	0	Seryl-tRNA	synthetase	N-terminal	domain
Phage_GP20	PF06810.6	gi|449066296|ref|YP_007433378.1|	-	1.3	8.4	7.9	1	8.7	1.2	2.0	1	1	1	2	2	2	0	Phage	minor	structural	protein	GP20
bZIP_2	PF07716.10	gi|449066296|ref|YP_007433378.1|	-	1.3	8.8	7.8	0.26	11.1	1.4	2.2	2	0	0	2	2	2	0	Basic	region	leucine	zipper
DUF904	PF06005.7	gi|449066296|ref|YP_007433378.1|	-	1.4	9.2	8.6	5	7.4	1.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF904)
CENP-H	PF05837.7	gi|449066296|ref|YP_007433378.1|	-	1.7	8.8	5.8	6.8	6.9	3.9	1.9	1	1	0	1	1	1	0	Centromere	protein	H	(CENP-H)
DUF106	PF01956.11	gi|449066296|ref|YP_007433378.1|	-	1.9	8.0	5.7	7.8	6.0	0.2	2.0	1	1	1	2	2	2	0	Integral	membrane	protein	DUF106
FYVE_2	PF02318.11	gi|449066296|ref|YP_007433378.1|	-	2	8.3	5.1	7.5	6.4	0.3	2.1	2	0	0	2	2	2	0	FYVE-type	zinc	finger
Osmo_CC	PF08946.5	gi|449066296|ref|YP_007433378.1|	-	2.3	8.2	5.4	0.72	9.9	0.5	2.2	2	1	0	2	2	2	0	Osmosensory	transporter	coiled	coil
Spc24	PF08286.6	gi|449066296|ref|YP_007433378.1|	-	3.1	7.5	9.6	4.2	7.1	1.2	2.1	1	1	1	2	2	2	0	Spc24	subunit	of	Ndc80
CENP-Q	PF13094.1	gi|449066296|ref|YP_007433378.1|	-	3.1	7.7	7.5	1.4	8.9	1.1	2.0	1	1	1	2	2	2	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
Uso1_p115_C	PF04871.8	gi|449066296|ref|YP_007433378.1|	-	3.4	7.6	6.9	2.6	8.0	0.4	2.1	1	1	1	2	2	2	0	Uso1	/	p115	like	vesicle	tethering	protein,	C	terminal	region
SRPRB	PF09439.5	gi|449066296|ref|YP_007433378.1|	-	4	6.6	5.9	4.9	6.3	0.5	2.1	1	1	1	2	2	2	0	Signal	recognition	particle	receptor	beta	subunit
DUF972	PF06156.8	gi|449066296|ref|YP_007433378.1|	-	5.4	7.4	7.2	15	6.0	0.5	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF972)
DUF724	PF05266.9	gi|449066296|ref|YP_007433378.1|	-	6.3	6.3	7.6	13	5.2	5.3	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF724)
TSC22	PF01166.13	gi|449066296|ref|YP_007433378.1|	-	8.9	6.3	7.6	1.8	8.5	0.7	2.3	2	1	0	2	2	2	0	TSC-22/dip/bun	family
MttA_Hcf106	PF02416.11	gi|449066297|ref|YP_007433379.1|	-	4.5e-11	41.7	7.0	2.6e-10	39.2	4.8	2.0	1	1	0	1	1	1	1	mttA/Hcf106	family
DUF4446	PF14584.1	gi|449066297|ref|YP_007433379.1|	-	0.0006	19.6	1.2	0.00075	19.3	0.8	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4446)
Transposase_22	PF02994.9	gi|449066297|ref|YP_007433379.1|	-	0.013	14.0	2.2	0.014	13.8	1.5	1.0	1	0	0	1	1	1	0	L1	transposable	element
DUF3573	PF12097.3	gi|449066297|ref|YP_007433379.1|	-	0.016	13.8	0.7	0.016	13.8	0.5	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3573)
OmpH	PF03938.9	gi|449066297|ref|YP_007433379.1|	-	0.031	14.1	7.6	0.033	14.1	5.3	1.2	1	0	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
V_ATPase_I	PF01496.14	gi|449066297|ref|YP_007433379.1|	-	0.047	11.5	0.5	0.044	11.6	0.4	1.2	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
SGT1	PF07093.6	gi|449066297|ref|YP_007433379.1|	-	0.074	11.4	3.2	0.076	11.3	2.2	1.0	1	0	0	1	1	1	0	SGT1	protein
DUF607	PF04678.8	gi|449066297|ref|YP_007433379.1|	-	0.099	12.5	0.6	0.096	12.5	0.4	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF607
FemAB	PF02388.11	gi|449066297|ref|YP_007433379.1|	-	0.12	11.0	3.3	0.12	11.0	2.3	1.1	1	0	0	1	1	1	0	FemAB	family
Med10	PF09748.4	gi|449066297|ref|YP_007433379.1|	-	0.19	11.5	2.7	0.3	10.9	1.9	1.4	1	1	0	1	1	1	0	Transcription	factor	subunit	Med10	of	Mediator	complex
DUF572	PF04502.8	gi|449066297|ref|YP_007433379.1|	-	0.29	10.3	6.9	0.31	10.2	4.8	1.0	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF572)
V-SNARE	PF05008.10	gi|449066297|ref|YP_007433379.1|	-	0.3	11.2	9.2	0.37	10.9	6.4	1.1	1	0	0	1	1	1	0	Vesicle	transport	v-SNARE	protein	N-terminus
AAA_23	PF13476.1	gi|449066297|ref|YP_007433379.1|	-	0.44	10.8	4.8	0.49	10.6	3.3	1.1	1	0	0	1	1	1	0	AAA	domain
HR1	PF02185.11	gi|449066297|ref|YP_007433379.1|	-	0.61	9.8	12.8	2	8.2	8.8	1.8	1	1	0	1	1	1	0	Hr1	repeat
DUF972	PF06156.8	gi|449066297|ref|YP_007433379.1|	-	0.73	10.2	5.2	0.88	9.9	3.6	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF972)
Phage_GPO	PF05929.6	gi|449066297|ref|YP_007433379.1|	-	1.6	7.9	5.5	1.6	7.9	3.8	1.0	1	0	0	1	1	1	0	Phage	capsid	scaffolding	protein	(GPO)	serine	peptidase
DUF3373	PF11853.3	gi|449066297|ref|YP_007433379.1|	-	1.7	7.1	7.5	1.9	6.9	5.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3373)
DivIC	PF04977.10	gi|449066297|ref|YP_007433379.1|	-	3.1	7.3	10.9	6	6.4	7.6	1.5	1	0	0	1	1	1	0	Septum	formation	initiator
DUF4407	PF14362.1	gi|449066297|ref|YP_007433379.1|	-	3.6	6.4	7.8	4.6	6.0	5.4	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
Atg14	PF10186.4	gi|449066297|ref|YP_007433379.1|	-	4	6.2	7.8	4.5	6.1	5.4	1.1	1	0	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
DUF2681	PF10883.3	gi|449066297|ref|YP_007433379.1|	-	4.1	7.6	13.5	1.2	9.3	5.1	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2681)
Ribosomal_L29	PF00831.18	gi|449066297|ref|YP_007433379.1|	-	5.1	6.8	13.9	0.36	10.5	4.2	2.1	1	1	1	2	2	2	0	Ribosomal	L29	protein
Spc24	PF08286.6	gi|449066297|ref|YP_007433379.1|	-	7.2	6.3	10.3	13	5.5	6.5	1.9	1	1	1	2	2	2	0	Spc24	subunit	of	Ndc80
OPA3	PF07047.7	gi|449066297|ref|YP_007433379.1|	-	8.2	6.2	10.5	13	5.5	7.3	1.6	1	1	0	1	1	1	0	Optic	atrophy	3	protein	(OPA3)
ABC_tran	PF00005.22	gi|449066298|ref|YP_007433380.1|	-	9.4e-29	100.4	0.0	1.3e-28	99.9	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|449066298|ref|YP_007433380.1|	-	8.8e-10	39.0	0.8	0.00012	22.1	0.0	2.1	1	1	1	2	2	2	2	AAA	domain
DUF258	PF03193.11	gi|449066298|ref|YP_007433380.1|	-	0.0004	19.5	0.2	0.0006	19.0	0.1	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_15	PF13175.1	gi|449066298|ref|YP_007433380.1|	-	0.0016	17.5	0.4	0.18	10.8	0.1	2.2	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA_16	PF13191.1	gi|449066298|ref|YP_007433380.1|	-	0.0017	18.3	0.3	0.0064	16.5	0.1	1.9	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_17	PF13207.1	gi|449066298|ref|YP_007433380.1|	-	0.015	16.1	0.6	0.032	15.0	0.4	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_22	PF13401.1	gi|449066298|ref|YP_007433380.1|	-	0.017	15.2	0.1	0.13	12.3	0.0	2.1	2	1	0	2	2	2	0	AAA	domain
AAA_29	PF13555.1	gi|449066298|ref|YP_007433380.1|	-	0.023	14.2	0.0	0.044	13.3	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
MobB	PF03205.9	gi|449066298|ref|YP_007433380.1|	-	0.029	14.0	0.1	0.082	12.6	0.1	1.8	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
SMC_N	PF02463.14	gi|449066298|ref|YP_007433380.1|	-	0.03	13.5	0.1	5.5	6.1	0.0	2.1	2	0	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
ABC_ATPase	PF09818.4	gi|449066298|ref|YP_007433380.1|	-	0.035	12.7	0.1	3.1	6.2	0.0	2.7	2	1	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
Rad17	PF03215.10	gi|449066298|ref|YP_007433380.1|	-	0.05	12.2	0.1	0.058	12.0	0.0	1.3	1	1	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
NACHT	PF05729.7	gi|449066298|ref|YP_007433380.1|	-	0.061	12.9	0.3	0.23	11.0	0.1	1.9	2	0	0	2	2	2	0	NACHT	domain
AAA_23	PF13476.1	gi|449066298|ref|YP_007433380.1|	-	0.076	13.3	0.2	0.13	12.5	0.1	1.6	1	1	0	1	1	1	0	AAA	domain
NB-ARC	PF00931.17	gi|449066298|ref|YP_007433380.1|	-	0.078	11.8	0.0	0.13	11.0	0.0	1.4	1	0	0	1	1	1	0	NB-ARC	domain
AAA_10	PF12846.2	gi|449066298|ref|YP_007433380.1|	-	0.13	11.6	0.0	0.49	9.7	0.0	1.9	2	0	0	2	2	2	0	AAA-like	domain
AAA_33	PF13671.1	gi|449066298|ref|YP_007433380.1|	-	0.15	11.8	0.0	0.29	11.0	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_18	PF13238.1	gi|449066298|ref|YP_007433380.1|	-	0.24	11.7	1.2	0.52	10.6	0.7	1.7	1	1	0	1	1	1	0	AAA	domain
BPD_transp_1	PF00528.17	gi|449066299|ref|YP_007433381.1|	-	1.2e-22	80.3	55.3	3.1e-14	52.9	12.3	3.2	2	1	1	3	3	3	2	Binding-protein-dependent	transport	system	inner	membrane	component
UPF0154	PF03672.8	gi|449066299|ref|YP_007433381.1|	-	1.4	8.5	4.8	5.5	6.6	0.5	2.7	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0154)
CPSase_L_D2	PF02786.12	gi|449066300|ref|YP_007433382.1|	-	2.7e-60	203.2	0.0	4.3e-60	202.6	0.0	1.3	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
CPSase_L_chain	PF00289.17	gi|449066300|ref|YP_007433382.1|	-	3.4e-44	149.4	0.2	6.2e-44	148.5	0.1	1.5	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
Biotin_carb_C	PF02785.14	gi|449066300|ref|YP_007433382.1|	-	2.5e-34	117.4	0.0	4.5e-34	116.6	0.0	1.4	1	0	0	1	1	1	1	Biotin	carboxylase	C-terminal	domain
ATPgrasp_Ter	PF15632.1	gi|449066300|ref|YP_007433382.1|	-	3.5e-11	42.4	0.0	6.8e-11	41.4	0.0	1.5	1	1	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp_4	PF13535.1	gi|449066300|ref|YP_007433382.1|	-	1.5e-09	37.8	0.0	4e-09	36.4	0.0	1.7	1	0	0	1	1	1	1	ATP-grasp	domain
Dala_Dala_lig_C	PF07478.8	gi|449066300|ref|YP_007433382.1|	-	1.7e-05	24.2	0.0	3.3e-05	23.3	0.0	1.4	1	0	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
ATP-grasp	PF02222.17	gi|449066300|ref|YP_007433382.1|	-	8.7e-05	21.9	0.2	0.00037	19.8	0.0	2.0	2	0	0	2	2	2	1	ATP-grasp	domain
ATP-grasp_3	PF02655.9	gi|449066300|ref|YP_007433382.1|	-	0.00095	19.0	0.0	0.0026	17.6	0.0	1.8	1	0	0	1	1	1	1	ATP-grasp	domain
RimK	PF08443.6	gi|449066300|ref|YP_007433382.1|	-	0.0018	17.7	0.0	0.0047	16.4	0.0	1.8	1	1	0	1	1	1	1	RimK-like	ATP-grasp	domain
ATP-grasp_5	PF13549.1	gi|449066300|ref|YP_007433382.1|	-	0.076	12.2	0.0	0.43	9.7	0.0	2.0	2	0	0	2	2	2	0	ATP-grasp	domain
Oxidored_nitro	PF00148.14	gi|449066300|ref|YP_007433382.1|	-	0.1	11.1	0.0	0.16	10.5	0.0	1.2	1	0	0	1	1	1	0	Nitrogenase	component	1	type	Oxidoreductase
Biotin_lipoyl	PF00364.17	gi|449066301|ref|YP_007433383.1|	-	4.4e-19	67.9	5.9	1.1e-18	66.5	1.5	2.5	2	0	0	2	2	2	1	Biotin-requiring	enzyme
Biotin_lipoyl_2	PF13533.1	gi|449066301|ref|YP_007433383.1|	-	3.4e-17	61.8	10.1	2.7e-09	36.5	0.2	2.9	2	1	1	3	3	3	2	Biotin-lipoyl	like
HlyD	PF00529.15	gi|449066301|ref|YP_007433383.1|	-	8.8e-10	38.3	6.9	2.3e-06	27.1	0.1	2.5	2	1	1	3	3	3	2	HlyD	family	secretion	protein
HlyD_2	PF12700.2	gi|449066301|ref|YP_007433383.1|	-	9.3e-09	34.8	1.4	7.2e-05	22.0	0.1	2.4	1	1	1	2	2	2	2	HlyD	family	secretion	protein
HlyD_3	PF13437.1	gi|449066301|ref|YP_007433383.1|	-	1.4e-08	35.0	3.0	0.0015	18.7	0.0	3.2	3	0	0	3	3	3	2	HlyD	family	secretion	protein
PYNP_C	PF07831.8	gi|449066301|ref|YP_007433383.1|	-	0.00099	18.5	0.4	0.19	11.2	0.0	2.5	1	1	1	2	2	2	1	Pyrimidine	nucleoside	phosphorylase	C-terminal	domain
RnfC_N	PF13375.1	gi|449066301|ref|YP_007433383.1|	-	0.0012	18.5	0.9	0.0038	16.9	0.6	1.9	1	1	0	1	1	1	1	RnfC	Barrel	sandwich	hybrid	domain
NQRA	PF05896.6	gi|449066301|ref|YP_007433383.1|	-	0.0017	17.5	0.3	0.0033	16.6	0.2	1.5	1	1	0	1	1	1	1	Na(+)-translocating	NADH-quinone	reductase	subunit	A	(NQRA)
PTS_EIIA_1	PF00358.15	gi|449066301|ref|YP_007433383.1|	-	0.0032	17.0	1.0	0.22	11.0	0.0	3.4	1	1	2	4	4	4	1	phosphoenolpyruvate-dependent	sugar	phosphotransferase	system,	EIIA	1
GCV_H	PF01597.14	gi|449066301|ref|YP_007433383.1|	-	0.014	15.1	0.2	0.014	15.1	0.2	2.3	3	0	0	3	3	3	0	Glycine	cleavage	H-protein
QRPTase_N	PF02749.11	gi|449066301|ref|YP_007433383.1|	-	0.021	14.6	0.2	0.85	9.4	0.0	3.0	1	1	1	3	3	3	0	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
DUF2118	PF09891.4	gi|449066301|ref|YP_007433383.1|	-	0.041	13.5	1.4	0.11	12.2	1.0	2.0	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2118)
Peptidase_M23	PF01551.17	gi|449066301|ref|YP_007433383.1|	-	0.09	12.8	1.2	3.1	7.9	0.8	3.0	1	1	0	1	1	1	0	Peptidase	family	M23
DUF1815	PF08844.5	gi|449066301|ref|YP_007433383.1|	-	0.12	11.9	0.0	0.33	10.5	0.0	1.7	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF1815)
Pox_vIL-18BP	PF05566.7	gi|449066301|ref|YP_007433383.1|	-	0.14	12.1	0.1	1.6	8.7	0.0	2.2	1	1	1	2	2	2	0	Orthopoxvirus	interleukin	18	binding	protein
Carboxyl_trans	PF01039.17	gi|449066302|ref|YP_007433384.1|	-	7.4e-189	628.1	1.4	8.3e-189	628.0	0.9	1.0	1	0	0	1	1	1	1	Carboxyl	transferase	domain
MdcE	PF06833.6	gi|449066302|ref|YP_007433384.1|	-	0.00012	21.3	0.0	0.00033	19.9	0.0	1.7	2	0	0	2	2	2	1	Malonate	decarboxylase	gamma	subunit	(MdcE)
DEAD	PF00270.24	gi|449066304|ref|YP_007433386.1|	-	3.7e-28	98.1	0.0	1.4e-26	92.9	0.0	2.7	3	0	0	3	3	3	1	DEAD/DEAH	box	helicase
ResIII	PF04851.10	gi|449066304|ref|YP_007433386.1|	-	5.2e-09	36.2	0.0	7e-08	32.5	0.0	2.5	2	1	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.26	gi|449066304|ref|YP_007433386.1|	-	1e-08	34.9	0.1	2.2e-08	33.8	0.1	1.5	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
HHH_5	PF14520.1	gi|449066304|ref|YP_007433386.1|	-	0.00034	20.7	0.3	0.0018	18.3	0.2	2.4	2	0	0	2	2	2	1	Helix-hairpin-helix	domain
DNA_pol_lambd_f	PF10391.4	gi|449066304|ref|YP_007433386.1|	-	0.0069	15.9	0.0	0.024	14.1	0.0	1.9	2	0	0	2	2	2	1	Fingers	domain	of	DNA	polymerase	lambda
SNF2_N	PF00176.18	gi|449066304|ref|YP_007433386.1|	-	0.018	13.8	0.0	0.036	12.8	0.0	1.5	1	0	0	1	1	1	0	SNF2	family	N-terminal	domain
KaiC	PF06745.8	gi|449066304|ref|YP_007433386.1|	-	0.045	12.8	0.0	0.11	11.6	0.0	1.6	1	0	0	1	1	1	0	KaiC
HHH	PF00633.18	gi|449066304|ref|YP_007433386.1|	-	0.061	13.0	0.0	0.24	11.1	0.0	2.1	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
RHH_1	PF01402.16	gi|449066305|ref|YP_007433387.1|	-	1.1e-08	34.5	0.1	1.9e-08	33.8	0.0	1.4	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
DUF2191	PF09957.4	gi|449066305|ref|YP_007433387.1|	-	0.06	13.1	0.2	0.15	11.8	0.1	1.7	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2191)
PHO4	PF01384.15	gi|449066306|ref|YP_007433388.1|	-	9.4e-35	119.8	37.4	1.5e-34	119.1	25.9	1.3	1	0	0	1	1	1	1	Phosphate	transporter	family
Peptidase_U4	PF03419.8	gi|449066306|ref|YP_007433388.1|	-	6.9	5.6	24.4	0.18	10.8	11.6	2.0	1	1	0	2	2	2	0	Sporulation	factor	SpoIIGA
PhoU_div	PF01865.11	gi|449066307|ref|YP_007433389.1|	-	8.7e-12	44.6	11.9	1.4e-11	44.0	8.3	1.3	1	1	0	1	1	1	1	Protein	of	unknown	function	DUF47
DUF763	PF05559.6	gi|449066308|ref|YP_007433390.1|	-	6.5e-133	442.6	0.0	7.5e-133	442.3	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF763)
CLAG	PF03805.8	gi|449066308|ref|YP_007433390.1|	-	0.16	9.2	1.8	0.22	8.8	1.2	1.1	1	0	0	1	1	1	0	Cytoadherence-linked	asexual	protein
Metallophos_2	PF12850.2	gi|449066309|ref|YP_007433391.1|	-	6.5e-10	39.0	0.0	9.2e-10	38.5	0.0	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|449066309|ref|YP_007433391.1|	-	3.3e-05	23.3	0.1	3.3e-05	23.3	0.0	1.4	2	0	0	2	2	2	1	Calcineurin-like	phosphoesterase
OrfB_Zn_ribbon	PF07282.6	gi|449066310|ref|YP_007433392.1|	-	9.2e-20	70.0	0.0	1.7e-19	69.2	0.0	1.5	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
DZR	PF12773.2	gi|449066310|ref|YP_007433392.1|	-	0.0086	15.8	0.2	0.015	15.1	0.1	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
OrfB_IS605	PF01385.14	gi|449066310|ref|YP_007433392.1|	-	0.0094	15.3	0.0	0.015	14.7	0.0	1.3	1	0	0	1	1	1	1	Probable	transposase
zinc_ribbon_2	PF13240.1	gi|449066310|ref|YP_007433392.1|	-	0.01	15.2	1.6	1.3	8.6	0.1	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
PhnA_Zn_Ribbon	PF08274.7	gi|449066310|ref|YP_007433392.1|	-	0.045	13.5	0.5	0.58	9.9	0.0	2.2	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
zf-ribbon_3	PF13248.1	gi|449066310|ref|YP_007433392.1|	-	0.23	10.6	6.7	1.9	7.8	0.6	2.1	1	1	1	2	2	2	0	zinc-ribbon	domain
UPF0547	PF10571.4	gi|449066310|ref|YP_007433392.1|	-	0.32	10.7	3.5	10	5.8	0.1	2.4	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
GATase_4	PF13230.1	gi|449066311|ref|YP_007433393.1|	-	3.8e-09	35.6	0.0	4.6e-09	35.3	0.0	1.1	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
GATase_6	PF13522.1	gi|449066311|ref|YP_007433393.1|	-	3.1e-07	30.4	0.0	5.8e-07	29.5	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
Lactamase_B_2	PF12706.2	gi|449066312|ref|YP_007433394.1|	-	2.4e-20	72.9	0.0	3e-20	72.5	0.0	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|449066312|ref|YP_007433394.1|	-	3.2e-12	46.4	0.5	3.3e-11	43.2	0.3	2.0	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_3	PF13483.1	gi|449066312|ref|YP_007433394.1|	-	0.0011	18.6	0.0	0.0017	18.0	0.0	1.4	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
PfkB	PF00294.19	gi|449066313|ref|YP_007433395.1|	-	2.4e-51	174.6	0.2	5.2e-51	173.5	0.2	1.5	1	1	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Phos_pyr_kin	PF08543.7	gi|449066313|ref|YP_007433395.1|	-	1.9e-08	33.7	0.0	2.7e-08	33.2	0.0	1.2	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
Carb_kinase	PF01256.12	gi|449066313|ref|YP_007433395.1|	-	0.028	13.7	0.0	0.042	13.1	0.0	1.2	1	0	0	1	1	1	0	Carbohydrate	kinase
Phos_pyr_kin	PF08543.7	gi|449066314|ref|YP_007433396.1|	-	2.1e-82	276.0	0.5	3.5e-82	275.3	0.3	1.4	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
PfkB	PF00294.19	gi|449066314|ref|YP_007433396.1|	-	4.5e-15	55.5	0.0	8.5e-15	54.6	0.0	1.4	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Carb_kinase	PF01256.12	gi|449066314|ref|YP_007433396.1|	-	2.8e-08	33.3	0.1	5.2e-08	32.4	0.0	1.4	1	0	0	1	1	1	1	Carbohydrate	kinase
PDDEXK_1	PF12705.2	gi|449066315|ref|YP_007433397.1|	-	1.3e-13	50.9	2.7	3.4e-09	36.4	1.6	2.8	1	1	1	2	2	2	2	PD-(D/E)XK	nuclease	superfamily
Cas_Cas4	PF01930.12	gi|449066315|ref|YP_007433397.1|	-	8.2e-11	42.0	0.1	1.1e-10	41.7	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF83
PDDEXK_3	PF13366.1	gi|449066315|ref|YP_007433397.1|	-	8e-08	32.3	0.1	1.6e-07	31.4	0.1	1.5	1	0	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
Chordopox_G2	PF05796.7	gi|449066315|ref|YP_007433397.1|	-	0.025	13.6	0.0	0.034	13.2	0.0	1.3	1	0	0	1	1	1	0	Chordopoxvirus	protein	G2
Glyco_tranf_2_3	PF13641.1	gi|449066316|ref|YP_007433398.1|	-	5.1e-43	147.4	0.0	8.2e-43	146.8	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glycos_transf_2	PF00535.21	gi|449066316|ref|YP_007433398.1|	-	2.4e-30	105.4	0.2	3.3e-30	104.9	0.1	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_trans_2_3	PF13632.1	gi|449066316|ref|YP_007433398.1|	-	3.1e-24	85.7	0.4	4.9e-24	85.1	0.3	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_transf_21	PF13506.1	gi|449066316|ref|YP_007433398.1|	-	8.2e-14	51.2	0.0	1.8e-13	50.1	0.0	1.5	2	0	0	2	2	2	1	Glycosyl	transferase	family	21
Glyco_tranf_2_2	PF10111.4	gi|449066316|ref|YP_007433398.1|	-	1.3e-12	47.3	0.0	2.1e-12	46.7	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.1	gi|449066316|ref|YP_007433398.1|	-	0.00025	21.2	0.0	0.00047	20.4	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
GNT-I	PF03071.10	gi|449066316|ref|YP_007433398.1|	-	0.0012	17.4	0.1	0.0017	16.9	0.0	1.1	1	0	0	1	1	1	1	GNT-I	family
DUF3392	PF11872.3	gi|449066316|ref|YP_007433398.1|	-	0.014	15.3	2.0	0.03	14.2	1.4	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3392)
DUF3363	PF11843.3	gi|449066316|ref|YP_007433398.1|	-	0.053	12.1	0.0	0.071	11.7	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3363)
FERM_C	PF09380.5	gi|449066316|ref|YP_007433398.1|	-	0.098	12.8	0.1	0.2	11.8	0.1	1.6	1	0	0	1	1	1	0	FERM	C-terminal	PH-like	domain
DUF3464	PF11947.3	gi|449066316|ref|YP_007433398.1|	-	8.1	5.8	5.9	0.89	9.0	1.0	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3464)
Lactamase_B_2	PF12706.2	gi|449066318|ref|YP_007433400.1|	-	3.4e-08	33.2	0.1	4.5e-08	32.8	0.1	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|449066318|ref|YP_007433400.1|	-	2.1e-07	30.7	0.6	3.4e-06	26.8	0.2	2.2	2	1	0	2	2	2	1	Metallo-beta-lactamase	superfamily
Lactamase_B_3	PF13483.1	gi|449066318|ref|YP_007433400.1|	-	5e-07	29.5	0.0	7.4e-07	29.0	0.0	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
DHH	PF01368.15	gi|449066318|ref|YP_007433400.1|	-	0.57	9.8	4.8	0.41	10.2	0.0	2.3	1	1	1	2	2	2	0	DHH	family
VIT1	PF01988.14	gi|449066319|ref|YP_007433401.1|	-	8.6e-53	178.9	4.6	9.7e-53	178.8	3.2	1.0	1	0	0	1	1	1	1	VIT	family
DUF2207	PF09972.4	gi|449066319|ref|YP_007433401.1|	-	0.00033	19.3	2.0	0.00042	19.0	1.4	1.3	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2207)
DUF1370	PF07114.6	gi|449066319|ref|YP_007433401.1|	-	0.06	12.5	0.9	0.11	11.7	0.1	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1370)
AAA_assoc_C	PF09821.4	gi|449066320|ref|YP_007433402.1|	-	1.2e-31	109.5	0.0	1.7e-31	108.9	0.0	1.2	1	0	0	1	1	1	1	C-terminal	AAA-associated	domain
Glyco_hydro_80	PF13647.1	gi|449066320|ref|YP_007433402.1|	-	0.0042	16.4	0.0	0.0057	15.9	0.0	1.1	1	0	0	1	1	1	1	Glycosyl	hydrolase	family	80	of	chitosanase	A
QueC	PF06508.8	gi|449066321|ref|YP_007433403.1|	-	2.1e-59	200.3	0.0	3e-59	199.8	0.0	1.2	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
GATase_7	PF13537.1	gi|449066321|ref|YP_007433403.1|	-	2e-13	50.1	0.0	5.1e-13	48.8	0.0	1.7	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_6	PF13522.1	gi|449066321|ref|YP_007433403.1|	-	2e-11	44.0	0.0	5.5e-11	42.5	0.0	1.7	2	0	0	2	2	2	1	Glutamine	amidotransferase	domain
ThiI	PF02568.9	gi|449066321|ref|YP_007433403.1|	-	5.3e-09	35.8	0.1	2.3e-08	33.7	0.0	2.1	2	1	0	2	2	2	1	Thiamine	biosynthesis	protein	(ThiI)
tRNA_Me_trans	PF03054.11	gi|449066321|ref|YP_007433403.1|	-	1.8e-06	26.7	0.0	5.7e-06	25.1	0.0	1.8	2	0	0	2	2	2	1	tRNA	methyl	transferase
Asn_synthase	PF00733.16	gi|449066321|ref|YP_007433403.1|	-	4.8e-06	26.2	0.0	9.7e-06	25.2	0.0	1.4	1	0	0	1	1	1	1	Asparagine	synthase
ATP_bind_3	PF01171.15	gi|449066321|ref|YP_007433403.1|	-	0.0004	19.9	0.0	0.00065	19.2	0.0	1.3	1	0	0	1	1	1	1	PP-loop	family
GATase_2	PF00310.16	gi|449066321|ref|YP_007433403.1|	-	0.001	17.8	0.0	0.23	10.1	0.0	2.4	1	1	0	2	2	2	2	Glutamine	amidotransferases	class-II
YjeF_N	PF03853.10	gi|449066321|ref|YP_007433403.1|	-	0.036	13.6	0.0	0.061	12.9	0.0	1.3	1	0	0	1	1	1	0	YjeF-related	protein	N-terminus
Glyco_transf_4	PF13439.1	gi|449066321|ref|YP_007433403.1|	-	0.054	13.2	0.3	0.21	11.2	0.0	2.1	3	0	0	3	3	3	0	Glycosyltransferase	Family	4
NAD_synthase	PF02540.12	gi|449066321|ref|YP_007433403.1|	-	0.11	11.4	0.1	0.46	9.3	0.0	1.9	2	0	0	2	2	2	0	NAD	synthase
DUF4174	PF13778.1	gi|449066321|ref|YP_007433403.1|	-	0.11	12.6	0.2	0.79	9.8	0.0	2.4	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4174)
DEAD	PF00270.24	gi|449066322|ref|YP_007433404.1|	-	8.7e-26	90.4	0.0	2.9e-25	88.7	0.0	1.8	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|449066322|ref|YP_007433404.1|	-	3.2e-16	58.9	0.0	7.6e-15	54.5	0.0	2.7	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
DUF1998	PF09369.5	gi|449066322|ref|YP_007433404.1|	-	1.6e-12	47.8	0.2	5.4e-12	46.1	0.1	2.0	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1998)
SecA_DEAD	PF07517.9	gi|449066322|ref|YP_007433404.1|	-	4.3e-06	26.2	0.0	7.7e-06	25.3	0.0	1.3	1	0	0	1	1	1	1	SecA	DEAD-like	domain
ResIII	PF04851.10	gi|449066322|ref|YP_007433404.1|	-	5.5e-05	23.0	0.0	0.00042	20.1	0.0	2.3	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
AAA_19	PF13245.1	gi|449066322|ref|YP_007433404.1|	-	0.0017	18.0	0.0	0.0048	16.6	0.0	1.7	1	0	0	1	1	1	1	Part	of	AAA	domain
TauE	PF01925.14	gi|449066323|ref|YP_007433405.1|	-	3.4e-42	144.5	25.1	4.2e-42	144.2	17.4	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
DUF1634	PF07843.6	gi|449066324|ref|YP_007433406.1|	-	1.8e-28	98.2	9.4	2.1e-28	98.0	6.5	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1634)
UPF0121	PF03661.8	gi|449066324|ref|YP_007433406.1|	-	0.0055	15.9	0.1	0.0055	15.9	0.0	1.9	1	1	1	2	2	2	1	Uncharacterised	protein	family	(UPF0121)
DUF3098	PF11297.3	gi|449066324|ref|YP_007433406.1|	-	0.083	12.6	0.1	0.083	12.6	0.1	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3098)
Tetraspannin	PF00335.15	gi|449066324|ref|YP_007433406.1|	-	0.096	11.9	8.2	0.13	11.4	5.7	1.2	1	0	0	1	1	1	0	Tetraspanin	family
SecE	PF00584.15	gi|449066326|ref|YP_007433408.1|	-	0.54	9.8	8.0	6.5	6.4	0.1	2.5	2	0	0	2	2	2	0	SecE/Sec61-gamma	subunits	of	protein	translocation	complex
Fig1	PF12351.3	gi|449066326|ref|YP_007433408.1|	-	0.75	9.6	6.4	0.65	9.8	2.8	1.8	1	1	1	2	2	2	0	Ca2+	regulator	and	membrane	fusion	protein	Fig1
Pox_A14	PF05767.7	gi|449066326|ref|YP_007433408.1|	-	1.4	8.9	8.0	0.39	10.6	3.3	1.9	2	0	0	2	2	2	0	Poxvirus	virion	envelope	protein	A14
SNARE_assoc	PF09335.6	gi|449066327|ref|YP_007433409.1|	-	1.7e-17	63.7	6.1	1.7e-17	63.7	4.2	1.8	2	0	0	2	2	2	1	SNARE	associated	Golgi	protein
DUF1981	PF09324.5	gi|449066328|ref|YP_007433410.1|	-	0.061	12.8	0.1	0.095	12.2	0.0	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1981)
CBS	PF00571.23	gi|449066329|ref|YP_007433411.1|	-	3.4e-29	100.3	4.8	3.6e-14	52.2	0.3	2.0	2	0	0	2	2	2	2	CBS	domain
IF3_N	PF05198.11	gi|449066329|ref|YP_007433411.1|	-	0.12	12.3	0.3	1.2	9.1	0.1	2.3	2	0	0	2	2	2	0	Translation	initiation	factor	IF-3,	N-terminal	domain
Arch_ATPase	PF01637.13	gi|449066330|ref|YP_007433412.1|	-	4.4e-17	62.5	1.0	7e-17	61.9	0.7	1.3	1	0	0	1	1	1	1	Archaeal	ATPase
AAA_14	PF13173.1	gi|449066330|ref|YP_007433412.1|	-	1.2e-10	41.3	0.1	5.2e-10	39.3	0.1	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|449066330|ref|YP_007433412.1|	-	9.7e-09	35.4	0.0	2.4e-08	34.1	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|449066330|ref|YP_007433412.1|	-	3.3e-06	27.3	0.0	6.7e-06	26.3	0.0	1.7	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_17	PF13207.1	gi|449066330|ref|YP_007433412.1|	-	0.00026	21.7	0.1	0.0018	19.1	0.0	2.3	1	1	0	1	1	1	1	AAA	domain
PhoH	PF02562.11	gi|449066330|ref|YP_007433412.1|	-	0.037	13.2	0.0	0.093	11.9	0.0	1.6	2	0	0	2	2	2	0	PhoH-like	protein
RuvA_C	PF07499.8	gi|449066330|ref|YP_007433412.1|	-	0.096	12.8	0.0	0.21	11.7	0.0	1.6	1	0	0	1	1	1	0	RuvA,	C-terminal	domain
ETF	PF01012.16	gi|449066331|ref|YP_007433413.1|	-	4.3e-29	101.3	0.1	5.6e-29	100.9	0.0	1.1	1	0	0	1	1	1	1	Electron	transfer	flavoprotein	domain
ETF_alpha	PF00766.14	gi|449066332|ref|YP_007433414.1|	-	2.5e-32	110.3	0.8	2.6e-31	107.0	0.1	2.5	2	0	0	2	2	2	1	Electron	transfer	flavoprotein	FAD-binding	domain
ETF	PF01012.16	gi|449066332|ref|YP_007433414.1|	-	1.9e-10	40.6	0.0	3.3e-10	39.9	0.0	1.4	1	0	0	1	1	1	1	Electron	transfer	flavoprotein	domain
Oxidored_nitro	PF00148.14	gi|449066332|ref|YP_007433414.1|	-	0.0034	16.0	0.0	0.0056	15.3	0.0	1.3	1	0	0	1	1	1	1	Nitrogenase	component	1	type	Oxidoreductase
Usp	PF00582.21	gi|449066332|ref|YP_007433414.1|	-	0.012	15.8	0.9	0.11	12.6	0.0	2.6	3	0	0	3	3	3	0	Universal	stress	protein	family
Cadherin-like	PF12733.2	gi|449066332|ref|YP_007433414.1|	-	0.053	13.7	0.4	0.14	12.4	0.3	1.7	1	0	0	1	1	1	0	Cadherin-like	beta	sandwich	domain
DUF2244	PF10003.4	gi|449066332|ref|YP_007433414.1|	-	0.11	11.8	0.0	0.19	11.0	0.0	1.4	1	0	0	1	1	1	0	Integral	membrane	protein	(DUF2244)
DAO	PF01266.19	gi|449066333|ref|YP_007433415.1|	-	1.1e-19	70.6	0.1	7.6e-09	34.9	0.0	2.2	1	1	1	2	2	2	2	FAD	dependent	oxidoreductase
FAD_oxidored	PF12831.2	gi|449066333|ref|YP_007433415.1|	-	3.4e-15	56.0	0.0	6.7e-15	55.0	0.0	1.4	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|449066333|ref|YP_007433415.1|	-	7.2e-12	44.8	0.6	1.2e-11	44.1	0.4	1.3	1	0	0	1	1	1	1	FAD	binding	domain
HI0933_like	PF03486.9	gi|449066333|ref|YP_007433415.1|	-	1.1e-09	37.3	0.3	3.3e-09	35.7	0.0	1.9	2	1	0	2	2	2	1	HI0933-like	protein
Pyr_redox_3	PF13738.1	gi|449066333|ref|YP_007433415.1|	-	1.9e-09	37.9	0.0	3.1e-09	37.1	0.0	1.4	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|449066333|ref|YP_007433415.1|	-	1.7e-07	30.6	0.1	5.1e-07	29.0	0.1	1.6	1	1	0	1	1	1	1	FAD	binding	domain
NAD_binding_8	PF13450.1	gi|449066333|ref|YP_007433415.1|	-	8.6e-07	28.8	3.1	1.3e-05	25.1	1.4	3.0	3	0	0	3	3	3	1	NAD(P)-binding	Rossmann-like	domain
Trp_halogenase	PF04820.9	gi|449066333|ref|YP_007433415.1|	-	1.4e-06	27.2	1.5	0.0002	20.1	0.0	2.9	2	1	1	3	3	3	1	Tryptophan	halogenase
Pyr_redox_2	PF07992.9	gi|449066333|ref|YP_007433415.1|	-	2.3e-06	27.6	1.6	2.7e-06	27.3	0.5	1.8	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.12	gi|449066333|ref|YP_007433415.1|	-	6.8e-06	25.3	1.4	1.4e-05	24.3	0.7	1.6	2	0	0	2	2	2	1	Thi4	family
Lycopene_cycl	PF05834.7	gi|449066333|ref|YP_007433415.1|	-	2.1e-05	23.6	0.2	0.018	13.9	0.3	2.1	2	0	0	2	2	2	2	Lycopene	cyclase	protein
GIDA	PF01134.17	gi|449066333|ref|YP_007433415.1|	-	2.1e-05	23.5	1.0	4.4e-05	22.5	0.7	1.5	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
Pyr_redox	PF00070.22	gi|449066333|ref|YP_007433415.1|	-	0.00054	20.3	2.7	0.0025	18.1	0.6	2.8	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Fer4_11	PF13247.1	gi|449066334|ref|YP_007433416.1|	-	9.4e-09	35.0	0.6	1.1e-08	34.7	0.4	1.1	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|449066334|ref|YP_007433416.1|	-	1.5e-07	31.7	22.0	4.1e-05	23.8	4.5	2.2	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|449066334|ref|YP_007433416.1|	-	6.8e-07	29.4	6.5	1e-06	28.9	4.5	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|449066334|ref|YP_007433416.1|	-	1.4e-06	27.9	6.7	1.8e-06	27.6	4.6	1.1	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|449066334|ref|YP_007433416.1|	-	0.00013	21.6	11.5	0.0026	17.5	1.8	2.9	2	1	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_20	PF14691.1	gi|449066334|ref|YP_007433416.1|	-	0.00035	20.1	5.0	0.0087	15.6	1.3	2.0	1	1	1	2	2	2	2	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_2	PF12797.2	gi|449066334|ref|YP_007433416.1|	-	0.002	17.9	11.5	0.0048	16.7	2.0	2.5	2	1	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|449066334|ref|YP_007433416.1|	-	0.0036	17.3	2.2	1.3	9.1	0.3	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|449066334|ref|YP_007433416.1|	-	0.0058	16.4	8.1	0.11	12.3	5.9	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|449066334|ref|YP_007433416.1|	-	0.038	14.5	13.8	0.12	13.0	1.1	2.2	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|449066334|ref|YP_007433416.1|	-	0.077	13.3	5.0	2	8.8	1.2	2.1	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|449066334|ref|YP_007433416.1|	-	0.081	12.5	15.4	0.36	10.4	1.8	4.0	3	1	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|449066334|ref|YP_007433416.1|	-	0.41	11.4	6.4	10	6.9	1.5	2.2	1	1	1	2	2	2	0	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.2	gi|449066334|ref|YP_007433416.1|	-	0.41	11.0	13.3	0.31	11.5	1.9	2.9	2	1	0	2	2	2	0	4Fe-4S	binding	domain
GCC2_GCC3	PF07699.8	gi|449066334|ref|YP_007433416.1|	-	2.5	7.7	8.2	19	4.9	5.6	2.6	1	1	0	1	1	1	0	GCC2	and	GCC3
Glycos_transf_1	PF00534.15	gi|449066335|ref|YP_007433417.1|	-	2.1e-09	37.0	0.0	4.8e-09	35.8	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Phosphorylase	PF00343.15	gi|449066335|ref|YP_007433417.1|	-	4.6e-09	34.7	0.1	1e-08	33.6	0.0	1.6	1	1	1	2	2	2	1	Carbohydrate	phosphorylase
Glyco_trans_1_4	PF13692.1	gi|449066335|ref|YP_007433417.1|	-	0.00033	20.8	0.0	0.00078	19.6	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
MFS_1	PF07690.11	gi|449066336|ref|YP_007433418.1|	-	5e-27	94.5	41.7	4.3e-21	75.0	16.3	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|449066336|ref|YP_007433418.1|	-	6.2e-07	28.3	15.7	6.2e-07	28.3	10.9	2.1	1	1	1	2	2	2	2	Sugar	(and	other)	transporter
MFS_1_like	PF12832.2	gi|449066336|ref|YP_007433418.1|	-	5.5e-05	22.8	6.1	0.0013	18.4	0.1	3.4	3	0	0	3	3	3	2	MFS_1	like	family
MFS_3	PF05977.8	gi|449066336|ref|YP_007433418.1|	-	0.02	13.0	7.6	0.46	8.5	1.7	2.2	2	0	0	2	2	2	0	Transmembrane	secretion	effector
ATP-synt_S1	PF05827.7	gi|449066336|ref|YP_007433418.1|	-	0.056	12.7	0.4	0.094	12.0	0.3	1.3	1	0	0	1	1	1	0	Vacuolar	ATP	synthase	subunit	S1	(ATP6S1)
DUF3463	PF11946.3	gi|449066337|ref|YP_007433419.1|	-	1.2e-30	105.9	2.4	1.7e-30	105.3	1.7	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3463)
Radical_SAM	PF04055.16	gi|449066337|ref|YP_007433419.1|	-	3e-16	60.0	0.0	9.1e-16	58.4	0.0	1.8	1	1	1	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|449066337|ref|YP_007433419.1|	-	7.8e-09	35.7	0.1	6.3e-07	29.5	0.0	2.5	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|449066337|ref|YP_007433419.1|	-	7.5e-06	25.9	0.0	5.1e-05	23.2	0.0	2.1	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
MraZ	PF02381.13	gi|449066337|ref|YP_007433419.1|	-	0.096	12.4	0.1	0.21	11.3	0.0	1.5	1	0	0	1	1	1	0	MraZ	protein
ATPase_gene1	PF09527.5	gi|449066338|ref|YP_007433420.1|	-	0.38	10.5	0.1	0.38	10.5	0.1	2.8	2	1	0	3	3	3	0	Putative	F0F1-ATPase	subunit	(ATPase_gene1)
DUF161	PF02588.10	gi|449066338|ref|YP_007433420.1|	-	0.98	9.7	14.3	0.089	13.1	5.6	2.0	1	1	1	2	2	2	0	Uncharacterized	BCR,	YitT	family	COG1284
DUF3816	PF12822.2	gi|449066338|ref|YP_007433420.1|	-	1.8	8.4	15.6	2.2	8.1	10.8	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3816)
FAD_binding_4	PF01565.18	gi|449066340|ref|YP_007433422.1|	-	5.8e-44	148.9	0.0	1.2e-43	147.8	0.0	1.6	1	0	0	1	1	1	1	FAD	binding	domain
FAD-oxidase_C	PF02913.14	gi|449066340|ref|YP_007433422.1|	-	9.5e-43	146.2	0.0	1.3e-42	145.8	0.0	1.2	1	0	0	1	1	1	1	FAD	linked	oxidases,	C-terminal	domain
CTP_transf_2	PF01467.21	gi|449066341|ref|YP_007433423.1|	-	1.1e-13	51.5	0.0	1.5e-13	51.0	0.0	1.2	1	0	0	1	1	1	1	Cytidylyltransferase
Helicase_C	PF00271.26	gi|449066341|ref|YP_007433423.1|	-	0.045	13.6	0.0	0.086	12.7	0.0	1.4	1	0	0	1	1	1	0	Helicase	conserved	C-terminal	domain
Citrate_ly_lig	PF08218.6	gi|449066341|ref|YP_007433423.1|	-	0.12	11.7	0.0	5.9	6.3	0.0	2.3	1	1	2	3	3	3	0	Citrate	lyase	ligase	C-terminal	domain
DUF981	PF06168.6	gi|449066342|ref|YP_007433424.1|	-	3.9e-64	215.9	18.4	4.5e-64	215.7	12.8	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF981)
DUF2427	PF10348.4	gi|449066342|ref|YP_007433424.1|	-	0.029	13.9	2.2	0.3	10.6	0.4	2.6	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF2427)
VPEP	PF07589.6	gi|449066342|ref|YP_007433424.1|	-	1.2	9.1	0.1	1.2	9.1	0.1	4.0	5	1	0	5	5	5	0	PEP-CTERM	motif
DUF1129	PF06570.6	gi|449066342|ref|YP_007433424.1|	-	6.8	5.9	9.8	3	7.1	1.7	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1129)
Tetraspannin	PF00335.15	gi|449066342|ref|YP_007433424.1|	-	8.4	5.6	21.1	0.18	11.0	1.7	2.7	1	1	3	4	4	4	0	Tetraspanin	family
HAD_2	PF13419.1	gi|449066343|ref|YP_007433425.1|	-	5.1e-19	69.1	0.0	1.2e-18	67.9	0.0	1.6	1	1	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|449066343|ref|YP_007433425.1|	-	0.00028	20.5	0.0	0.00045	19.8	0.0	1.3	1	0	0	1	1	1	1	HAD-hyrolase-like
MIase	PF02426.11	gi|449066344|ref|YP_007433426.1|	-	3.8e-12	45.8	0.0	7.3e-12	44.9	0.0	1.5	1	1	1	2	2	2	1	Muconolactone	delta-isomerase
GYD	PF08734.6	gi|449066344|ref|YP_007433426.1|	-	0.017	14.8	0.0	0.018	14.7	0.0	1.2	1	0	0	1	1	1	0	GYD	domain
AsnC_trans_reg	PF01037.16	gi|449066344|ref|YP_007433426.1|	-	0.13	12.0	0.0	0.19	11.4	0.0	1.4	1	0	0	1	1	1	0	AsnC	family
SBP56	PF05694.6	gi|449066346|ref|YP_007433428.1|	-	3.9e-209	694.8	0.0	4.4e-209	694.7	0.0	1.0	1	0	0	1	1	1	1	56kDa	selenium	binding	protein	(SBP56)
Lactonase	PF10282.4	gi|449066346|ref|YP_007433428.1|	-	0.19	10.7	0.0	2	7.3	0.0	2.3	2	1	1	3	3	3	0	Lactonase,	7-bladed	beta-propeller
AMP-binding	PF00501.23	gi|449066347|ref|YP_007433429.1|	-	1.4e-89	300.3	0.0	1.7e-89	300.0	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|449066347|ref|YP_007433429.1|	-	4.9e-24	85.0	2.0	1.8e-23	83.2	0.6	2.3	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
BPL_LplA_LipB	PF03099.14	gi|449066348|ref|YP_007433430.1|	-	9e-16	58.0	0.3	1.4e-15	57.4	0.2	1.2	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
Biotin_lipoyl	PF00364.17	gi|449066349|ref|YP_007433431.1|	-	9.7e-13	47.5	1.3	1.4e-12	47.0	0.9	1.2	1	0	0	1	1	1	1	Biotin-requiring	enzyme
Biotin_lipoyl_2	PF13533.1	gi|449066349|ref|YP_007433431.1|	-	3.4e-08	33.0	5.4	0.0001	21.8	0.7	2.1	1	1	1	2	2	2	2	Biotin-lipoyl	like
HlyD_2	PF12700.2	gi|449066349|ref|YP_007433431.1|	-	0.00014	21.1	2.4	0.092	11.8	0.1	2.0	1	1	1	2	2	2	2	HlyD	family	secretion	protein
GCV_H	PF01597.14	gi|449066349|ref|YP_007433431.1|	-	0.0018	17.9	0.2	0.0022	17.6	0.1	1.2	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
RnfC_N	PF13375.1	gi|449066349|ref|YP_007433431.1|	-	0.0035	17.0	0.3	0.0059	16.3	0.2	1.4	1	1	1	2	2	2	2	RnfC	Barrel	sandwich	hybrid	domain
HlyD	PF00529.15	gi|449066349|ref|YP_007433431.1|	-	0.017	14.4	1.0	0.017	14.4	0.7	1.9	2	0	0	2	2	2	0	HlyD	family	secretion	protein
HlyD_3	PF13437.1	gi|449066349|ref|YP_007433431.1|	-	0.023	15.0	0.6	6.8	7.0	0.0	2.1	2	0	0	2	2	2	0	HlyD	family	secretion	protein
Radical_SAM	PF04055.16	gi|449066350|ref|YP_007433432.1|	-	1.2e-15	58.0	0.1	3.2e-15	56.6	0.0	1.7	2	0	0	2	2	2	1	Radical	SAM	superfamily
adh_short_C2	PF13561.1	gi|449066350|ref|YP_007433432.1|	-	0.016	15.0	0.1	0.06	13.1	0.0	1.9	1	1	0	1	1	1	0	Enoyl-(Acyl	carrier	protein)	reductase
DUF3198	PF11433.3	gi|449066350|ref|YP_007433432.1|	-	0.041	13.7	0.2	0.097	12.5	0.1	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3198)
B12-binding	PF02310.14	gi|449066350|ref|YP_007433432.1|	-	0.055	13.3	0.3	1.3	8.9	0.1	2.5	1	1	1	2	2	2	0	B12	binding	domain
Resolvase	PF00239.16	gi|449066350|ref|YP_007433432.1|	-	0.075	12.8	0.0	2.1	8.1	0.0	2.6	2	0	0	2	2	2	0	Resolvase,	N	terminal	domain
BPL_LplA_LipB	PF03099.14	gi|449066351|ref|YP_007433433.1|	-	6.7e-15	55.2	0.0	9.5e-15	54.7	0.0	1.2	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
HpcH_HpaI	PF03328.9	gi|449066353|ref|YP_007433435.1|	-	3.8e-31	107.7	0.0	2.1e-29	101.9	0.0	2.1	1	1	0	1	1	1	1	HpcH/HpaI	aldolase/citrate	lyase	family
C-C_Bond_Lyase	PF15617.1	gi|449066353|ref|YP_007433435.1|	-	1.8e-17	63.2	0.1	1.6e-09	37.0	0.0	2.1	2	0	0	2	2	2	2	C-C_Bond_Lyase	of	the	TIM-Barrel	fold
BH4	PF02180.12	gi|449066353|ref|YP_007433435.1|	-	0.056	12.9	0.1	0.13	11.7	0.0	1.6	1	0	0	1	1	1	0	Bcl-2	homology	region	4
4HBT	PF03061.17	gi|449066354|ref|YP_007433436.1|	-	4.8e-15	55.4	0.0	5.9e-15	55.1	0.0	1.1	1	0	0	1	1	1	1	Thioesterase	superfamily
4HBT_3	PF13622.1	gi|449066354|ref|YP_007433436.1|	-	1.5e-05	24.8	0.0	1.9e-05	24.5	0.0	1.1	1	0	0	1	1	1	1	Thioesterase-like	superfamily
DUF4442	PF14539.1	gi|449066354|ref|YP_007433436.1|	-	0.016	15.1	0.0	0.021	14.8	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4442)
ETF	PF01012.16	gi|449066356|ref|YP_007433438.1|	-	4.1e-79	264.0	0.2	1.8e-38	131.8	0.2	2.1	2	0	0	2	2	2	2	Electron	transfer	flavoprotein	domain
ETF_alpha	PF00766.14	gi|449066356|ref|YP_007433438.1|	-	1.1e-31	108.3	0.1	2.7e-31	107.0	0.1	1.7	1	0	0	1	1	1	1	Electron	transfer	flavoprotein	FAD-binding	domain
GatB_Yqey	PF02637.13	gi|449066356|ref|YP_007433438.1|	-	0.031	13.9	0.1	0.59	9.8	0.1	2.2	1	1	0	1	1	1	0	GatB	domain
Oxidored_nitro	PF00148.14	gi|449066356|ref|YP_007433438.1|	-	0.073	11.7	0.6	7.3	5.1	0.0	2.5	2	1	0	2	2	2	0	Nitrogenase	component	1	type	Oxidoreductase
DAO	PF01266.19	gi|449066357|ref|YP_007433439.1|	-	1.4e-18	66.9	0.5	2.5e-09	36.5	0.0	2.2	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
HI0933_like	PF03486.9	gi|449066357|ref|YP_007433439.1|	-	1.1e-10	40.5	6.0	1.6e-08	33.4	0.9	2.2	2	0	0	2	2	2	2	HI0933-like	protein
FAD_oxidored	PF12831.2	gi|449066357|ref|YP_007433439.1|	-	1.4e-09	37.5	2.1	2.4e-09	36.8	1.4	1.4	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|449066357|ref|YP_007433439.1|	-	7.6e-09	34.9	1.7	1.5e-08	33.9	1.2	1.4	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox_2	PF07992.9	gi|449066357|ref|YP_007433439.1|	-	1.1e-08	35.1	2.0	1.9e-08	34.4	1.4	1.6	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|449066357|ref|YP_007433439.1|	-	1.8e-07	30.3	3.2	5.4e-07	28.8	2.2	1.7	1	1	0	1	1	1	1	Glucose	inhibited	division	protein	A
Pyr_redox_3	PF13738.1	gi|449066357|ref|YP_007433439.1|	-	1.5e-06	28.4	0.0	2.9e-06	27.4	0.0	1.5	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|449066357|ref|YP_007433439.1|	-	2.1e-06	27.6	0.1	4e-06	26.7	0.1	1.5	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.12	gi|449066357|ref|YP_007433439.1|	-	1.5e-05	24.2	0.2	2.8e-05	23.3	0.2	1.5	1	0	0	1	1	1	1	Thi4	family
FAD_binding_3	PF01494.14	gi|449066357|ref|YP_007433439.1|	-	1.5e-05	24.2	0.2	0.0013	17.8	0.2	2.4	3	0	0	3	3	3	1	FAD	binding	domain
Lycopene_cycl	PF05834.7	gi|449066357|ref|YP_007433439.1|	-	4.3e-05	22.6	1.4	0.0002	20.3	1.0	1.9	1	1	0	1	1	1	1	Lycopene	cyclase	protein
Pyr_redox	PF00070.22	gi|449066357|ref|YP_007433439.1|	-	0.0002	21.6	0.6	0.056	13.8	0.0	2.6	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
AlaDh_PNT_C	PF01262.16	gi|449066357|ref|YP_007433439.1|	-	0.055	13.0	0.1	0.11	12.0	0.0	1.5	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
NAD_binding_7	PF13241.1	gi|449066357|ref|YP_007433439.1|	-	0.075	13.2	0.0	0.17	12.1	0.0	1.6	1	0	0	1	1	1	0	Putative	NAD(P)-binding
NAD_binding_9	PF13454.1	gi|449066357|ref|YP_007433439.1|	-	0.076	12.7	1.9	1.9	8.2	0.1	2.2	2	0	0	2	2	2	0	FAD-NAD(P)-binding
3HCDH_N	PF02737.13	gi|449066357|ref|YP_007433439.1|	-	0.11	12.1	0.8	0.22	11.1	0.5	1.6	1	1	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Fer4_7	PF12838.2	gi|449066358|ref|YP_007433440.1|	-	1.3e-07	31.9	24.6	2e-05	24.8	9.4	2.2	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|449066358|ref|YP_007433440.1|	-	1.3e-06	27.7	18.3	2.2e-06	26.9	2.9	3.1	3	0	0	3	3	3	1	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|449066358|ref|YP_007433440.1|	-	2.2e-06	27.3	10.3	3.4e-06	26.7	7.1	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|449066358|ref|YP_007433440.1|	-	1.9e-05	24.3	18.4	0.00073	19.3	2.7	2.8	2	1	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|449066358|ref|YP_007433440.1|	-	2.4e-05	24.4	11.9	0.00016	21.8	8.7	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|449066358|ref|YP_007433440.1|	-	3.1e-05	23.6	14.8	7.7e-05	22.3	2.0	2.5	2	1	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|449066358|ref|YP_007433440.1|	-	0.00016	21.6	6.9	0.00057	19.8	0.3	2.3	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_11	PF13247.1	gi|449066358|ref|YP_007433440.1|	-	0.00016	21.4	4.7	0.00024	20.9	3.2	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
ETF_QO	PF05187.8	gi|449066358|ref|YP_007433440.1|	-	0.00069	19.5	0.3	0.00092	19.1	0.2	1.2	1	0	0	1	1	1	1	Electron	transfer	flavoprotein-ubiquinone	oxidoreductase
Fer4_21	PF14697.1	gi|449066358|ref|YP_007433440.1|	-	0.00072	19.3	10.8	0.0019	18.0	7.5	1.7	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|449066358|ref|YP_007433440.1|	-	0.00079	19.5	14.6	0.0008	19.5	2.4	2.4	2	1	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|449066358|ref|YP_007433440.1|	-	0.00095	19.4	8.6	0.0061	16.8	1.4	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|449066358|ref|YP_007433440.1|	-	0.014	15.9	4.5	0.014	15.9	3.1	2.8	2	1	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|449066358|ref|YP_007433440.1|	-	0.099	13.3	2.7	0.099	13.3	1.9	2.8	1	1	3	4	4	4	0	4Fe-4S	double	cluster	binding	domain
Fer4_18	PF13746.1	gi|449066358|ref|YP_007433440.1|	-	0.2	12.1	13.7	0.28	11.6	3.3	2.7	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
A2L_zn_ribbon	PF08792.5	gi|449066358|ref|YP_007433440.1|	-	0.84	9.1	5.1	0.6	9.6	0.5	2.4	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
DUF723	PF05265.8	gi|449066358|ref|YP_007433440.1|	-	3.8	7.3	8.1	0.44	10.3	2.4	2.0	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF723)
FdhD-NarQ	PF02634.10	gi|449066359|ref|YP_007433441.1|	-	8.7e-74	247.9	0.0	9.9e-74	247.7	0.0	1.0	1	0	0	1	1	1	1	FdhD/NarQ	family
DUF1641	PF07849.6	gi|449066360|ref|YP_007433442.1|	-	7.1e-13	47.9	0.2	1.1e-12	47.3	0.1	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1641)
Radical_SAM	PF04055.16	gi|449066360|ref|YP_007433442.1|	-	0.076	13.1	0.0	0.16	12.1	0.0	1.5	2	0	0	2	2	2	0	Radical	SAM	superfamily
Molybdopterin	PF00384.17	gi|449066361|ref|YP_007433443.1|	-	1.3e-87	294.2	0.0	1.7e-87	293.9	0.0	1.1	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase
Molydop_binding	PF01568.16	gi|449066361|ref|YP_007433443.1|	-	1.5e-20	73.0	0.0	2.9e-20	72.1	0.0	1.5	1	0	0	1	1	1	1	Molydopterin	dinucleotide	binding	domain
Molybdop_Fe4S4	PF04879.11	gi|449066361|ref|YP_007433443.1|	-	8e-19	67.2	0.4	8e-19	67.2	0.2	2.3	2	0	0	2	2	1	1	Molybdopterin	oxidoreductase	Fe4S4	domain
Fer2_4	PF13510.1	gi|449066361|ref|YP_007433443.1|	-	4.7e-13	48.7	0.1	1.3e-12	47.3	0.1	1.8	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
NADH-G_4Fe-4S_3	PF10588.4	gi|449066361|ref|YP_007433443.1|	-	1.3e-12	46.7	0.9	1.3e-12	46.7	0.6	2.1	2	0	0	2	2	1	1	NADH-ubiquinone	oxidoreductase-G	iron-sulfur	binding	region
Fer4	PF00037.22	gi|449066361|ref|YP_007433443.1|	-	3.7e-11	42.1	17.7	3.7e-06	26.3	2.4	3.5	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|449066361|ref|YP_007433443.1|	-	5.6e-08	32.5	5.9	5.6e-08	32.5	4.1	2.4	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|449066361|ref|YP_007433443.1|	-	8.9e-08	31.6	17.8	0.00027	20.6	1.2	3.1	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|449066361|ref|YP_007433443.1|	-	6.7e-07	29.5	10.9	6.7e-07	29.5	7.5	3.5	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|449066361|ref|YP_007433443.1|	-	2.2e-06	27.8	9.5	2.2e-06	27.8	6.6	3.3	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|449066361|ref|YP_007433443.1|	-	5.8e-06	26.0	11.7	5.8e-06	26.0	8.1	3.0	3	1	2	5	5	4	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|449066361|ref|YP_007433443.1|	-	2.6e-05	24.1	10.6	2.6e-05	24.1	7.3	2.9	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|449066361|ref|YP_007433443.1|	-	3.3e-05	24.2	11.6	0.002	18.5	0.5	3.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|449066361|ref|YP_007433443.1|	-	3.3e-05	24.5	11.9	0.0032	18.1	2.2	3.8	3	1	0	3	3	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.2	gi|449066361|ref|YP_007433443.1|	-	4.6e-05	23.0	11.0	0.0011	18.7	0.9	3.3	4	0	0	4	4	2	2	4Fe-4S	binding	domain
TPP_enzyme_M	PF00205.17	gi|449066361|ref|YP_007433443.1|	-	5e-05	23.0	0.2	1.6	8.5	0.0	3.5	3	0	0	3	3	3	2	Thiamine	pyrophosphate	enzyme,	central	domain
Fer2	PF00111.22	gi|449066361|ref|YP_007433443.1|	-	9.7e-05	22.0	4.3	0.00011	21.8	0.1	2.7	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_17	PF13534.1	gi|449066361|ref|YP_007433443.1|	-	0.00093	19.5	14.9	0.13	12.5	2.6	3.1	2	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|449066361|ref|YP_007433443.1|	-	0.0018	18.7	5.8	0.15	12.6	1.0	2.9	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.1	gi|449066361|ref|YP_007433443.1|	-	0.0097	16.2	6.9	1.2	9.5	0.1	2.8	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_3	PF12798.2	gi|449066361|ref|YP_007433443.1|	-	0.018	15.5	26.2	0.057	14.0	5.4	3.2	3	0	0	3	3	2	0	4Fe-4S	binding	domain
2_5_RNA_ligase2	PF13563.1	gi|449066362|ref|YP_007433444.1|	-	1.1e-11	44.6	0.0	1.7e-11	44.0	0.0	1.2	1	0	0	1	1	1	1	2'-5'	RNA	ligase	superfamily
Metallophos_2	PF12850.2	gi|449066362|ref|YP_007433444.1|	-	0.0013	18.5	0.1	0.016	15.0	0.1	2.1	1	1	1	2	2	2	1	Calcineurin-like	phosphoesterase	superfamily	domain
DUF2067	PF09840.4	gi|449066363|ref|YP_007433445.1|	-	0.015	14.8	0.5	0.02	14.4	0.2	1.4	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2067)
RHH_1	PF01402.16	gi|449066363|ref|YP_007433445.1|	-	0.015	15.1	0.4	0.037	13.9	0.0	1.8	2	0	0	2	2	2	0	Ribbon-helix-helix	protein,	copG	family
CBS	PF00571.23	gi|449066363|ref|YP_007433445.1|	-	0.082	12.7	0.5	0.25	11.1	0.0	1.8	2	1	0	2	2	2	0	CBS	domain
PIN	PF01850.16	gi|449066364|ref|YP_007433446.1|	-	1.9e-16	60.5	1.2	2.1e-16	60.3	0.8	1.0	1	0	0	1	1	1	1	PIN	domain
TauE	PF01925.14	gi|449066365|ref|YP_007433447.1|	-	6.3e-48	163.3	37.5	7.2e-48	163.1	26.0	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
CCG	PF02754.11	gi|449066366|ref|YP_007433448.1|	-	1.2e-28	98.8	0.1	1.2e-15	57.2	0.0	2.5	3	0	0	3	3	3	2	Cysteine-rich	domain
SMRP1	PF15181.1	gi|449066366|ref|YP_007433448.1|	-	0.072	12.4	0.0	0.11	11.8	0.0	1.2	1	0	0	1	1	1	0	Spermatid-specific	manchette-related	protein	1
Fer4_8	PF13183.1	gi|449066367|ref|YP_007433449.1|	-	1.7e-10	40.7	6.7	2.6e-10	40.1	4.7	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|449066367|ref|YP_007433449.1|	-	1.4e-09	38.1	4.0	2.5e-09	37.3	2.8	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|449066367|ref|YP_007433449.1|	-	2.3e-08	34.1	6.1	4.7e-08	33.1	4.2	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|449066367|ref|YP_007433449.1|	-	1.2e-05	25.6	3.9	0.0019	18.6	0.3	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|449066367|ref|YP_007433449.1|	-	1.2e-05	25.5	6.5	2.3e-05	24.6	4.5	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|449066367|ref|YP_007433449.1|	-	0.00026	21.6	3.4	0.015	16.0	0.3	2.5	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Fer4_10	PF13237.1	gi|449066367|ref|YP_007433449.1|	-	0.00074	19.2	11.9	0.0079	15.9	8.9	2.0	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|449066367|ref|YP_007433449.1|	-	0.0024	17.7	9.7	0.28	11.1	1.5	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|449066367|ref|YP_007433449.1|	-	0.023	15.0	12.6	0.53	10.7	1.5	2.2	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|449066367|ref|YP_007433449.1|	-	0.024	14.4	9.6	0.11	12.3	6.7	1.9	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|449066367|ref|YP_007433449.1|	-	0.11	13.1	2.2	0.42	11.2	0.1	2.4	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_20	PF14691.1	gi|449066367|ref|YP_007433449.1|	-	0.17	11.5	7.5	0.097	12.3	0.6	2.2	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4	PF00037.22	gi|449066367|ref|YP_007433449.1|	-	0.28	10.8	13.6	0.42	10.2	2.0	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
IZUMO	PF15005.1	gi|449066367|ref|YP_007433449.1|	-	0.49	10.4	4.8	0.96	9.4	0.5	2.4	2	0	0	2	2	2	0	Izumo	sperm-egg	fusion
GrpE	PF01025.14	gi|449066368|ref|YP_007433450.1|	-	0.14	11.6	0.3	0.23	11.0	0.2	1.3	1	0	0	1	1	1	0	GrpE
Pyr_redox_2	PF07992.9	gi|449066369|ref|YP_007433451.1|	-	5.3e-13	49.3	0.0	1.1e-12	48.3	0.0	1.6	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|449066369|ref|YP_007433451.1|	-	8.3e-09	34.9	0.0	1.6e-08	33.9	0.0	1.5	2	0	0	2	2	2	1	FAD	binding	domain
GIDA	PF01134.17	gi|449066369|ref|YP_007433451.1|	-	3.1e-08	32.9	0.0	0.00054	18.9	0.0	2.2	2	0	0	2	2	2	2	Glucose	inhibited	division	protein	A
FAD_binding_2	PF00890.19	gi|449066369|ref|YP_007433451.1|	-	1.1e-07	31.1	0.0	4.7e-06	25.6	0.0	2.1	2	0	0	2	2	2	1	FAD	binding	domain
Pyr_redox_3	PF13738.1	gi|449066369|ref|YP_007433451.1|	-	1.2e-07	32.0	0.1	0.0003	20.9	0.0	2.2	1	1	1	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|449066369|ref|YP_007433451.1|	-	4.9e-07	28.5	0.2	0.00095	17.7	0.1	2.1	1	1	1	2	2	2	2	HI0933-like	protein
FAD_oxidored	PF12831.2	gi|449066369|ref|YP_007433451.1|	-	5.1e-07	29.1	0.1	9e-07	28.3	0.0	1.4	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|449066369|ref|YP_007433451.1|	-	9.9e-07	28.7	0.0	2.3e-06	27.5	0.0	1.6	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.12	gi|449066369|ref|YP_007433451.1|	-	1.9e-06	27.1	0.0	3e-06	26.5	0.0	1.3	1	0	0	1	1	1	1	Thi4	family
Pyr_redox	PF00070.22	gi|449066369|ref|YP_007433451.1|	-	1.9e-05	25.0	0.4	0.0016	18.7	0.0	2.4	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|449066369|ref|YP_007433451.1|	-	3e-05	23.0	0.2	0.00014	20.8	0.0	2.1	3	0	0	3	3	3	1	FAD	dependent	oxidoreductase
Amino_oxidase	PF01593.19	gi|449066369|ref|YP_007433451.1|	-	7.3e-05	22.0	0.1	0.0041	16.2	0.0	2.2	2	0	0	2	2	2	1	Flavin	containing	amine	oxidoreductase
NAD_binding_9	PF13454.1	gi|449066369|ref|YP_007433451.1|	-	0.0018	18.0	0.0	0.18	11.5	0.0	2.9	3	0	0	3	3	3	1	FAD-NAD(P)-binding
Lycopene_cycl	PF05834.7	gi|449066369|ref|YP_007433451.1|	-	0.002	17.1	0.0	0.0028	16.6	0.0	1.2	1	0	0	1	1	1	1	Lycopene	cyclase	protein
ThiF	PF00899.16	gi|449066369|ref|YP_007433451.1|	-	0.013	15.2	0.2	0.033	14.0	0.0	1.7	2	0	0	2	2	2	0	ThiF	family
Shikimate_DH	PF01488.15	gi|449066369|ref|YP_007433451.1|	-	0.034	14.2	0.1	0.074	13.1	0.0	1.5	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
NAD_binding_7	PF13241.1	gi|449066369|ref|YP_007433451.1|	-	0.044	14.0	0.0	0.1	12.8	0.0	1.7	1	1	0	1	1	1	0	Putative	NAD(P)-binding
CPSase_L_chain	PF00289.17	gi|449066369|ref|YP_007433451.1|	-	0.047	13.7	0.0	0.095	12.8	0.0	1.5	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
K_oxygenase	PF13434.1	gi|449066369|ref|YP_007433451.1|	-	0.064	12.1	0.0	0.53	9.1	0.0	2.1	2	0	0	2	2	2	0	L-lysine	6-monooxygenase	(NADPH-requiring)
CCG	PF02754.11	gi|449066370|ref|YP_007433452.1|	-	5.9e-09	35.8	0.0	1.8e-07	31.0	0.0	2.8	2	2	0	2	2	2	1	Cysteine-rich	domain
TusA	PF01206.12	gi|449066371|ref|YP_007433453.1|	-	1.1e-12	47.3	0.0	1.2e-12	47.1	0.0	1.0	1	0	0	1	1	1	1	Sulfurtransferase	TusA
MoeZ_MoeB	PF05237.8	gi|449066371|ref|YP_007433453.1|	-	0.022	14.3	0.0	0.025	14.1	0.0	1.2	1	0	0	1	1	1	0	MoeZ/MoeB	domain
Pyr_redox_2	PF07992.9	gi|449066372|ref|YP_007433454.1|	-	9.1e-10	38.7	0.0	1.9e-09	37.7	0.0	1.7	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
DrsE	PF02635.10	gi|449066373|ref|YP_007433455.1|	-	1.4e-08	34.8	0.0	1.6e-08	34.6	0.0	1.1	1	0	0	1	1	1	1	DsrE/DsrF-like	family
DrsE_2	PF13686.1	gi|449066373|ref|YP_007433455.1|	-	2.6e-06	27.3	0.5	8.4e-06	25.6	0.3	1.7	1	1	0	1	1	1	1	DsrE/DsrF/DrsH-like	family
DUF1641	PF07849.6	gi|449066374|ref|YP_007433456.1|	-	9.5e-16	57.1	0.3	4.2e-14	51.8	0.1	3.1	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF1641)
UbiD	PF01977.11	gi|449066374|ref|YP_007433456.1|	-	0.0072	14.8	0.2	0.13	10.6	0.0	2.1	1	1	1	2	2	2	1	3-octaprenyl-4-hydroxybenzoate	carboxy-lyase
Sec5	PF15469.1	gi|449066374|ref|YP_007433456.1|	-	0.067	12.9	4.7	0.16	11.7	0.2	3.0	2	1	0	2	2	2	0	Exocyst	complex	component	Sec5
DUF2666	PF10869.3	gi|449066374|ref|YP_007433456.1|	-	0.21	11.5	4.0	9.8	6.2	0.2	3.0	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF2666)
DUF2482	PF10655.4	gi|449066374|ref|YP_007433456.1|	-	0.27	11.3	4.1	15	5.7	0.2	3.4	2	2	0	2	2	2	0	Hypothetical	protein	of	unknown	function	(DUF2482)
Syntaxin_2	PF14523.1	gi|449066374|ref|YP_007433456.1|	-	0.27	11.2	2.2	0.88	9.6	0.1	2.6	3	0	0	3	3	3	0	Syntaxin-like	protein
DUF3886	PF13025.1	gi|449066374|ref|YP_007433456.1|	-	0.27	11.2	10.2	1.1	9.3	0.4	3.9	5	0	0	5	5	5	0	Protein	of	unknown	function	(DUF3886)
Fer4_8	PF13183.1	gi|449066375|ref|YP_007433457.1|	-	6.9e-10	38.8	6.7	1.3e-09	37.9	4.6	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|449066375|ref|YP_007433457.1|	-	1.2e-08	35.1	6.9	1.2e-08	35.1	4.8	1.7	2	0	0	2	2	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|449066375|ref|YP_007433457.1|	-	1e-05	25.6	8.4	2.2e-05	24.6	5.8	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|449066375|ref|YP_007433457.1|	-	1.2e-05	25.6	4.9	0.053	13.9	0.1	2.5	3	0	0	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|449066375|ref|YP_007433457.1|	-	2.7e-05	23.7	8.0	0.0078	16.0	0.9	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|449066375|ref|YP_007433457.1|	-	0.00011	21.9	9.8	0.00029	20.5	6.8	1.7	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|449066375|ref|YP_007433457.1|	-	0.00067	19.9	9.7	0.007	16.7	7.5	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|449066375|ref|YP_007433457.1|	-	0.0014	18.7	11.1	0.0024	18.0	0.8	2.2	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|449066375|ref|YP_007433457.1|	-	0.0099	15.7	7.9	0.11	12.4	6.0	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_20	PF14691.1	gi|449066375|ref|YP_007433457.1|	-	0.014	15.0	5.7	0.033	13.7	0.2	2.3	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_16	PF13484.1	gi|449066375|ref|YP_007433457.1|	-	0.051	14.3	11.3	0.26	12.0	7.9	2.2	1	1	0	1	1	1	0	4Fe-4S	double	cluster	binding	domain
SHOCT	PF09851.4	gi|449066375|ref|YP_007433457.1|	-	0.077	12.4	3.4	0.2	11.1	2.3	1.7	1	0	0	1	1	1	0	Short	C-terminal	domain
Fer4	PF00037.22	gi|449066375|ref|YP_007433457.1|	-	0.28	10.8	16.9	0.12	11.9	1.9	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|449066375|ref|YP_007433457.1|	-	0.55	10.2	13.0	2.6	8.0	1.4	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_13	PF13370.1	gi|449066375|ref|YP_007433457.1|	-	1.6	9.2	7.3	2.9	8.3	0.2	2.7	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
TusA	PF01206.12	gi|449066376|ref|YP_007433458.1|	-	2.3e-25	87.9	0.0	2.7e-25	87.7	0.0	1.0	1	0	0	1	1	1	1	Sulfurtransferase	TusA
DUF2249	PF10006.4	gi|449066376|ref|YP_007433458.1|	-	0.005	16.3	0.0	0.019	14.5	0.0	1.7	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2249)
SH3_3	PF08239.6	gi|449066376|ref|YP_007433458.1|	-	0.12	12.5	0.0	0.18	12.0	0.0	1.2	1	0	0	1	1	1	0	Bacterial	SH3	domain
DrsE_2	PF13686.1	gi|449066377|ref|YP_007433459.1|	-	1.6e-28	99.3	0.1	2.2e-28	98.9	0.0	1.2	1	0	0	1	1	1	1	DsrE/DsrF/DrsH-like	family
DrsE	PF02635.10	gi|449066377|ref|YP_007433459.1|	-	3.5e-08	33.5	0.0	1.2e-07	31.7	0.0	1.7	1	1	0	1	1	1	1	DsrE/DsrF-like	family
DUF4254	PF14063.1	gi|449066377|ref|YP_007433459.1|	-	0.073	12.6	0.0	0.095	12.3	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4254)
DrsE	PF02635.10	gi|449066378|ref|YP_007433460.1|	-	2e-16	60.1	0.0	2.2e-16	59.9	0.0	1.0	1	0	0	1	1	1	1	DsrE/DsrF-like	family
DrsE_2	PF13686.1	gi|449066378|ref|YP_007433460.1|	-	1.1e-14	54.3	0.6	1e-06	28.6	0.1	2.0	1	1	1	2	2	2	2	DsrE/DsrF/DrsH-like	family
Pyr_redox_2	PF07992.9	gi|449066379|ref|YP_007433461.1|	-	3.6e-25	89.0	9.0	3.8e-16	59.5	0.1	3.8	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|449066379|ref|YP_007433461.1|	-	1.2e-19	70.4	4.7	1e-15	57.8	0.1	2.7	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|449066379|ref|YP_007433461.1|	-	3.3e-17	62.4	0.0	3.8e-16	59.0	0.0	2.5	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
DAO	PF01266.19	gi|449066379|ref|YP_007433461.1|	-	1.3e-12	47.3	8.2	0.00047	19.1	0.0	3.3	2	1	1	3	3	3	3	FAD	dependent	oxidoreductase
Pyr_redox_3	PF13738.1	gi|449066379|ref|YP_007433461.1|	-	4.7e-12	46.4	0.0	1.8e-11	44.4	0.0	1.9	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|449066379|ref|YP_007433461.1|	-	1.3e-09	37.4	6.2	7.5e-05	21.7	0.1	3.5	3	1	1	4	4	4	2	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.9	gi|449066379|ref|YP_007433461.1|	-	4.6e-09	35.2	4.1	0.0025	16.3	0.3	4.2	3	1	1	4	4	4	3	HI0933-like	protein
Thi4	PF01946.12	gi|449066379|ref|YP_007433461.1|	-	4.8e-08	32.3	1.8	6.6e-05	22.1	0.0	2.7	3	0	0	3	3	3	2	Thi4	family
Trp_halogenase	PF04820.9	gi|449066379|ref|YP_007433461.1|	-	6e-08	31.7	0.1	4.9e-05	22.1	0.0	2.2	2	0	0	2	2	2	2	Tryptophan	halogenase
FAD_oxidored	PF12831.2	gi|449066379|ref|YP_007433461.1|	-	1.5e-07	30.9	0.8	9.3e-06	24.9	0.1	2.5	3	0	0	3	3	3	1	FAD	dependent	oxidoreductase
FAD_binding_3	PF01494.14	gi|449066379|ref|YP_007433461.1|	-	1.6e-07	30.7	0.6	0.00011	21.4	0.1	2.2	2	0	0	2	2	2	2	FAD	binding	domain
FAD_binding_2	PF00890.19	gi|449066379|ref|YP_007433461.1|	-	7e-07	28.4	6.1	0.00013	21.0	1.1	2.9	3	0	0	3	3	3	2	FAD	binding	domain
NAD_binding_8	PF13450.1	gi|449066379|ref|YP_007433461.1|	-	1e-06	28.6	2.4	0.0013	18.7	0.3	2.4	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
K_oxygenase	PF13434.1	gi|449066379|ref|YP_007433461.1|	-	1.9e-05	23.7	0.1	0.013	14.4	0.0	2.6	2	1	1	3	3	3	2	L-lysine	6-monooxygenase	(NADPH-requiring)
AlaDh_PNT_C	PF01262.16	gi|449066379|ref|YP_007433461.1|	-	0.00076	19.0	0.2	0.11	12.0	0.0	2.4	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
Lycopene_cycl	PF05834.7	gi|449066379|ref|YP_007433461.1|	-	0.0016	17.4	0.1	0.36	9.7	0.0	2.2	2	0	0	2	2	2	2	Lycopene	cyclase	protein
NAD_Gly3P_dh_N	PF01210.18	gi|449066379|ref|YP_007433461.1|	-	0.0026	17.4	0.1	2	8.1	0.0	2.5	2	0	0	2	2	2	2	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
3HCDH_N	PF02737.13	gi|449066379|ref|YP_007433461.1|	-	0.0027	17.3	0.4	1.5	8.4	0.0	2.3	2	0	0	2	2	2	2	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
GDI	PF00996.13	gi|449066379|ref|YP_007433461.1|	-	0.0029	15.9	0.2	0.0046	15.3	0.2	1.2	1	0	0	1	1	1	1	GDP	dissociation	inhibitor
NAD_binding_7	PF13241.1	gi|449066379|ref|YP_007433461.1|	-	0.0042	17.3	0.4	2.2	8.6	0.0	2.6	2	0	0	2	2	2	1	Putative	NAD(P)-binding
Myosin_N	PF02736.14	gi|449066379|ref|YP_007433461.1|	-	0.031	13.9	0.0	0.13	11.9	0.0	2.1	1	0	0	1	1	1	0	Myosin	N-terminal	SH3-like	domain
ApbA	PF02558.11	gi|449066379|ref|YP_007433461.1|	-	0.15	11.4	4.0	21	4.4	0.0	3.6	4	0	0	4	4	4	0	Ketopantoate	reductase	PanE/ApbA
TrkA_N	PF02254.13	gi|449066379|ref|YP_007433461.1|	-	1	9.4	6.2	1.7	8.6	0.1	3.2	4	0	0	4	4	3	0	TrkA-N	domain
NAD_binding_9	PF13454.1	gi|449066379|ref|YP_007433461.1|	-	1	9.1	3.1	48	3.6	0.1	3.5	2	2	0	3	3	3	0	FAD-NAD(P)-binding
STN	PF07660.9	gi|449066380|ref|YP_007433462.1|	-	0.11	12.1	0.0	0.32	10.5	0.0	1.9	1	0	0	1	1	1	0	Secretin	and	TonB	N	terminus	short	domain
Thioredoxin_3	PF13192.1	gi|449066381|ref|YP_007433463.1|	-	1e-13	50.8	0.1	2e-13	49.9	0.1	1.5	1	0	0	1	1	1	1	Thioredoxin	domain
DUF836	PF05768.9	gi|449066381|ref|YP_007433463.1|	-	0.0027	17.9	0.0	0.0052	17.0	0.0	1.5	1	0	0	1	1	1	1	Glutaredoxin-like	domain	(DUF836)
Thioredoxin	PF00085.15	gi|449066381|ref|YP_007433463.1|	-	0.0035	17.0	0.1	0.013	15.1	0.0	1.9	2	0	0	2	2	2	1	Thioredoxin
Glutaredoxin	PF00462.19	gi|449066381|ref|YP_007433463.1|	-	0.034	14.1	0.7	0.082	12.9	0.5	1.6	1	0	0	1	1	1	0	Glutaredoxin
UPF0278	PF08745.6	gi|449066382|ref|YP_007433464.1|	-	0.001	18.3	0.3	0.0018	17.5	0.1	1.4	1	1	0	1	1	1	1	UPF0278	family
Peptidase_M23	PF01551.17	gi|449066383|ref|YP_007433465.1|	-	6.2e-06	26.1	0.0	1.1e-05	25.3	0.0	1.3	1	0	0	1	1	1	1	Peptidase	family	M23
Radical_SAM	PF04055.16	gi|449066384|ref|YP_007433466.1|	-	4.5e-13	49.7	0.5	9.3e-13	48.6	0.1	1.6	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|449066384|ref|YP_007433466.1|	-	0.015	15.4	0.0	0.035	14.2	0.0	1.6	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
YukD	PF08817.5	gi|449066384|ref|YP_007433466.1|	-	0.093	13.3	0.0	0.44	11.1	0.0	2.0	2	0	0	2	2	2	0	WXG100	protein	secretion	system	(Wss),	protein	YukD
Radical_SAM	PF04055.16	gi|449066385|ref|YP_007433467.1|	-	4.6e-12	46.4	0.1	2.2e-11	44.2	0.0	2.0	1	1	1	2	2	2	1	Radical	SAM	superfamily
B12-binding	PF02310.14	gi|449066385|ref|YP_007433467.1|	-	0.037	13.8	0.0	0.13	12.1	0.0	1.9	1	1	0	1	1	1	0	B12	binding	domain
BPL_LplA_LipB	PF03099.14	gi|449066386|ref|YP_007433468.1|	-	9.4e-13	48.2	0.0	1.8e-12	47.3	0.0	1.5	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
Lip_prot_lig_C	PF10437.4	gi|449066386|ref|YP_007433468.1|	-	0.00035	20.1	0.7	0.00082	19.0	0.1	1.9	2	0	0	2	2	2	1	Bacterial	lipoate	protein	ligase	C-terminus
PrgU	PF09627.5	gi|449066386|ref|YP_007433468.1|	-	0.017	14.6	0.2	0.038	13.5	0.2	1.5	1	0	0	1	1	1	0	PrgU-like	protein
DUF1886	PF09171.5	gi|449066387|ref|YP_007433469.1|	-	0.0032	16.5	1.0	0.0033	16.4	0.7	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1886)
ResB	PF05140.9	gi|449066387|ref|YP_007433469.1|	-	0.016	13.7	0.1	0.018	13.6	0.1	1.0	1	0	0	1	1	1	0	ResB-like	family
HAD_2	PF13419.1	gi|449066388|ref|YP_007433470.1|	-	5.1e-06	26.8	0.0	6.6e-06	26.4	0.0	1.3	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
GCV_H	PF01597.14	gi|449066389|ref|YP_007433471.1|	-	7.1e-29	99.9	0.3	8e-29	99.8	0.2	1.1	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
Biotin_lipoyl	PF00364.17	gi|449066389|ref|YP_007433471.1|	-	0.01	15.4	0.0	0.022	14.3	0.0	1.6	1	1	0	1	1	1	1	Biotin-requiring	enzyme
UB2H	PF14814.1	gi|449066389|ref|YP_007433471.1|	-	0.045	13.4	0.0	0.38	10.5	0.0	2.2	2	0	0	2	2	2	0	Bifunctional	transglycosylase	second	domain
DPBB_1	PF03330.13	gi|449066389|ref|YP_007433471.1|	-	0.092	12.7	0.0	2	8.4	0.0	2.4	1	1	1	2	2	2	0	Rare	lipoprotein	A	(RlpA)-like	double-psi	beta-barrel
GCV_H	PF01597.14	gi|449066390|ref|YP_007433472.1|	-	5.1e-42	142.3	1.3	6.3e-42	142.1	0.9	1.1	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
Biotin_lipoyl	PF00364.17	gi|449066390|ref|YP_007433472.1|	-	4e-05	23.1	1.7	0.00013	21.4	0.5	2.1	2	0	0	2	2	2	1	Biotin-requiring	enzyme
RnfC_N	PF13375.1	gi|449066390|ref|YP_007433472.1|	-	0.017	14.7	0.2	0.017	14.7	0.2	1.9	2	0	0	2	2	2	0	RnfC	Barrel	sandwich	hybrid	domain
BPL_LplA_LipB	PF03099.14	gi|449066391|ref|YP_007433473.1|	-	4.8e-10	39.5	0.1	8.3e-10	38.7	0.1	1.4	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
Lip_prot_lig_C	PF10437.4	gi|449066391|ref|YP_007433473.1|	-	0.0012	18.4	0.1	0.0037	16.9	0.1	1.9	1	1	0	1	1	1	1	Bacterial	lipoate	protein	ligase	C-terminus
DUF3490	PF11995.3	gi|449066392|ref|YP_007433474.1|	-	0.015	14.9	0.1	0.019	14.5	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3490)
Tax	PF02959.11	gi|449066392|ref|YP_007433474.1|	-	0.1	12.0	0.0	0.12	11.8	0.0	1.2	1	0	0	1	1	1	0	HTLV	Tax
OsmC	PF02566.14	gi|449066393|ref|YP_007433475.1|	-	1.5e-20	73.2	0.0	2.2e-20	72.6	0.0	1.2	1	0	0	1	1	1	1	OsmC-like	protein
HTH_24	PF13412.1	gi|449066395|ref|YP_007433477.1|	-	1.1e-20	72.6	1.3	2.2e-12	46.1	0.2	2.4	2	0	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|449066395|ref|YP_007433477.1|	-	9.8e-16	57.0	0.2	5.2e-08	32.3	0.0	2.9	3	0	0	3	3	3	2	AsnC-type	helix-turn-helix	domain
HTH_11	PF08279.7	gi|449066395|ref|YP_007433477.1|	-	6.3e-06	25.7	0.5	0.00043	19.8	0.0	2.3	2	0	0	2	2	2	1	HTH	domain
HTH_Mga	PF08280.6	gi|449066395|ref|YP_007433477.1|	-	1.6e-05	24.5	0.0	0.11	12.3	0.0	2.7	3	0	0	3	3	3	2	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_28	PF13518.1	gi|449066395|ref|YP_007433477.1|	-	0.00076	19.4	0.0	0.65	10.0	0.0	2.5	2	0	0	2	2	2	2	Helix-turn-helix	domain
HTH_20	PF12840.2	gi|449066395|ref|YP_007433477.1|	-	0.0012	18.5	0.0	0.4	10.5	0.0	2.3	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|449066395|ref|YP_007433477.1|	-	0.0017	17.9	0.0	2.2	8.0	0.0	2.4	2	0	0	2	2	2	2	Homeodomain-like	domain
MarR	PF01047.17	gi|449066395|ref|YP_007433477.1|	-	0.0019	17.8	0.1	1.1	8.9	0.0	2.4	2	0	0	2	2	2	2	MarR	family
HTH_5	PF01022.15	gi|449066395|ref|YP_007433477.1|	-	0.0044	16.6	0.1	0.18	11.5	0.0	2.3	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
MarR_2	PF12802.2	gi|449066395|ref|YP_007433477.1|	-	0.0078	15.8	0.1	0.31	10.7	0.0	2.2	2	0	0	2	2	2	1	MarR	family
Rrf2	PF02082.15	gi|449066395|ref|YP_007433477.1|	-	0.0083	16.2	0.0	0.058	13.5	0.0	2.0	2	0	0	2	2	2	1	Transcriptional	regulator
HTH_Crp_2	PF13545.1	gi|449066395|ref|YP_007433477.1|	-	0.025	14.3	0.0	9.1	6.1	0.0	2.3	2	0	0	2	2	2	0	Crp-like	helix-turn-helix	domain
HTH_10	PF04967.7	gi|449066395|ref|YP_007433477.1|	-	0.033	13.7	0.1	1.5	8.4	0.0	2.3	2	0	0	2	2	2	0	HTH	DNA	binding	domain
HTH_27	PF13463.1	gi|449066395|ref|YP_007433477.1|	-	0.097	13.0	0.0	6.6	7.1	0.0	2.5	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
DUF977	PF06163.6	gi|449066395|ref|YP_007433477.1|	-	0.12	12.1	0.0	0.38	10.5	0.0	1.8	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF977)
HTH_34	PF13601.1	gi|449066395|ref|YP_007433477.1|	-	0.12	12.3	0.0	9.7	6.3	0.0	2.4	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
DUF1059	PF06348.6	gi|449066396|ref|YP_007433478.1|	-	1.4e-27	95.2	0.8	1.6e-27	95.0	0.5	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1059)
DUF1059	PF06348.6	gi|449066397|ref|YP_007433479.1|	-	3.8e-56	186.7	0.3	2e-27	94.7	0.0	2.0	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF1059)
A_thal_3526	PF09713.5	gi|449066397|ref|YP_007433479.1|	-	0.0012	18.8	0.0	0.2	11.8	0.0	2.2	2	0	0	2	2	2	1	Plant	protein	1589	of	unknown	function	(A_thal_3526)
Phyto_Pns9_10	PF05878.6	gi|449066397|ref|YP_007433479.1|	-	0.049	12.6	0.0	0.055	12.4	0.0	1.0	1	0	0	1	1	1	0	Phytoreovirus	nonstructural	protein	Pns9/Pns10
IF2_N	PF04760.10	gi|449066397|ref|YP_007433479.1|	-	0.093	12.3	2.0	1.9	8.1	0.2	2.3	2	0	0	2	2	2	0	Translation	initiation	factor	IF-2,	N-terminal	region
Zn-ribbon_8	PF09723.5	gi|449066397|ref|YP_007433479.1|	-	0.19	11.6	0.8	2	8.4	0.0	2.2	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-GRF	PF06839.7	gi|449066397|ref|YP_007433479.1|	-	0.27	11.1	2.5	0.5	10.3	0.1	2.1	2	0	0	2	2	2	0	GRF	zinc	finger
PqqA	PF08042.6	gi|449066397|ref|YP_007433479.1|	-	0.49	10.1	2.7	19	5.0	0.1	2.4	2	0	0	2	2	2	0	PqqA	family
DUF929	PF06053.6	gi|449066399|ref|YP_007433481.1|	-	1.6e-58	197.7	14.3	2.6e-58	197.0	9.9	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF929)
Thioredoxin_7	PF13899.1	gi|449066399|ref|YP_007433481.1|	-	0.0098	15.8	0.1	0.023	14.7	0.0	1.7	1	1	1	2	2	2	1	Thioredoxin-like
Thioredoxin_2	PF13098.1	gi|449066399|ref|YP_007433481.1|	-	0.035	14.3	0.2	0.13	12.4	0.0	2.0	2	0	0	2	2	2	0	Thioredoxin-like	domain
DUF677	PF05055.7	gi|449066400|ref|YP_007433482.1|	-	1.2	7.7	7.6	1.7	7.2	5.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF677)
DUF3792	PF12670.2	gi|449066400|ref|YP_007433482.1|	-	1.8	8.4	7.4	0.55	10.1	2.8	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3792)
Amidase	PF01425.16	gi|449066401|ref|YP_007433483.1|	-	2.6e-104	349.5	0.0	2.9e-104	349.3	0.0	1.0	1	0	0	1	1	1	1	Amidase
7kD_DNA_binding	PF02294.13	gi|449066402|ref|YP_007433484.1|	-	9.1e-43	143.7	3.7	1e-42	143.6	2.6	1.0	1	0	0	1	1	1	1	7kD	DNA-binding	domain
Molybdopterin	PF00384.17	gi|449066403|ref|YP_007433485.1|	-	1.2e-07	30.8	0.0	0.00014	20.7	0.0	2.1	2	0	0	2	2	2	2	Molybdopterin	oxidoreductase
Molydop_binding	PF01568.16	gi|449066403|ref|YP_007433485.1|	-	0.00026	20.8	0.0	0.0014	18.4	0.0	2.2	2	0	0	2	2	2	1	Molydopterin	dinucleotide	binding	domain
Na_H_Exchanger	PF00999.16	gi|449066404|ref|YP_007433486.1|	-	2.5e-49	167.8	56.6	3.1e-49	167.5	39.2	1.0	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
CoA_trans	PF01144.18	gi|449066406|ref|YP_007433488.1|	-	4.1e-23	81.7	0.0	5.3e-23	81.3	0.0	1.1	1	0	0	1	1	1	1	Coenzyme	A	transferase
CoA_trans	PF01144.18	gi|449066407|ref|YP_007433489.1|	-	5.4e-29	100.9	0.0	6.1e-29	100.7	0.0	1.0	1	0	0	1	1	1	1	Coenzyme	A	transferase
Hydantoinase_B	PF02538.9	gi|449066408|ref|YP_007433490.1|	-	8.6e-156	519.2	0.1	9.7e-156	519.0	0.1	1.0	1	0	0	1	1	1	1	Hydantoinase	B/oxoprolinase
Hydantoinase_A	PF01968.13	gi|449066409|ref|YP_007433491.1|	-	9.6e-89	297.3	2.1	7.3e-87	291.1	0.1	2.2	2	0	0	2	2	2	2	Hydantoinase/oxoprolinase
Hydant_A_N	PF05378.8	gi|449066409|ref|YP_007433491.1|	-	8.9e-49	165.3	0.0	1.7e-48	164.4	0.0	1.5	1	0	0	1	1	1	1	Hydantoinase/oxoprolinase	N-terminal	region
MutL	PF13941.1	gi|449066409|ref|YP_007433491.1|	-	0.00013	20.4	0.2	0.28	9.4	0.0	2.2	2	0	0	2	2	2	2	MutL	protein
BcrAD_BadFG	PF01869.15	gi|449066409|ref|YP_007433491.1|	-	0.015	14.5	0.0	0.033	13.4	0.0	1.8	2	0	0	2	2	2	0	BadF/BadG/BcrA/BcrD	ATPase	family
ROK	PF00480.15	gi|449066409|ref|YP_007433491.1|	-	0.038	13.8	0.0	0.13	12.0	0.0	1.9	2	0	0	2	2	2	0	ROK	family
FGGY_N	PF00370.16	gi|449066409|ref|YP_007433491.1|	-	0.22	10.7	0.1	0.94	8.7	0.0	1.9	2	0	0	2	2	2	0	FGGY	family	of	carbohydrate	kinases,	N-terminal	domain
Methyltransf_31	PF13847.1	gi|449066410|ref|YP_007433492.1|	-	4e-14	52.4	0.1	6.8e-14	51.7	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|449066410|ref|YP_007433492.1|	-	1.6e-11	44.5	0.0	2.6e-11	43.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|449066410|ref|YP_007433492.1|	-	9.4e-11	42.0	0.0	1.5e-10	41.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|449066410|ref|YP_007433492.1|	-	1.5e-09	37.4	0.0	2.2e-09	36.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_18	PF12847.2	gi|449066410|ref|YP_007433492.1|	-	2e-08	34.8	0.0	2.8e-08	34.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|449066410|ref|YP_007433492.1|	-	6.8e-08	32.5	0.0	1.1e-07	31.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|449066410|ref|YP_007433492.1|	-	1.9e-07	31.3	0.0	3.1e-07	30.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.15	gi|449066410|ref|YP_007433492.1|	-	1.5e-06	27.5	0.0	1.8e-06	27.2	0.0	1.1	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
PrmA	PF06325.8	gi|449066410|ref|YP_007433492.1|	-	1.1e-05	24.7	0.0	1.5e-05	24.3	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_23	PF13489.1	gi|449066410|ref|YP_007433492.1|	-	1.4e-05	24.9	0.0	1.7e-05	24.5	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_32	PF13679.1	gi|449066410|ref|YP_007433492.1|	-	0.00019	21.1	0.0	0.00025	20.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
FtsJ	PF01728.14	gi|449066410|ref|YP_007433492.1|	-	0.00058	19.8	0.0	0.0007	19.6	0.0	1.2	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
PCMT	PF01135.14	gi|449066410|ref|YP_007433492.1|	-	0.0021	17.6	0.0	0.004	16.7	0.0	1.4	2	0	0	2	2	2	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
UPF0020	PF01170.13	gi|449066410|ref|YP_007433492.1|	-	0.0028	17.2	0.0	0.0037	16.8	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
FmrO	PF07091.6	gi|449066410|ref|YP_007433492.1|	-	0.01	14.8	0.0	0.014	14.3	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	RNA	methyltransferase	(FmrO)
CheR	PF01739.13	gi|449066410|ref|YP_007433492.1|	-	0.015	14.6	0.1	0.11	11.8	0.1	2.0	1	1	1	2	2	2	0	CheR	methyltransferase,	SAM	binding	domain
DOT1	PF08123.8	gi|449066410|ref|YP_007433492.1|	-	0.017	14.4	0.1	0.052	12.8	0.0	1.7	1	1	1	2	2	2	0	Histone	methylation	protein	DOT1
Methyltransf_4	PF02390.12	gi|449066410|ref|YP_007433492.1|	-	0.028	13.4	0.0	0.041	12.9	0.0	1.3	1	0	0	1	1	1	0	Putative	methyltransferase
AdoMet_MTase	PF07757.8	gi|449066410|ref|YP_007433492.1|	-	0.064	13.3	0.0	0.1	12.7	0.0	1.3	1	0	0	1	1	1	0	Predicted	AdoMet-dependent	methyltransferase
NAS	PF03059.11	gi|449066410|ref|YP_007433492.1|	-	0.072	12.2	0.0	0.089	11.9	0.0	1.2	1	0	0	1	1	1	0	Nicotianamine	synthase	protein
MFS_1	PF07690.11	gi|449066411|ref|YP_007433493.1|	-	5.1e-26	91.2	59.8	3.6e-21	75.2	19.5	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Peptidase_M1	PF01433.15	gi|449066412|ref|YP_007433494.1|	-	7.4e-114	380.8	0.0	1.1e-113	380.3	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	M1
Peptidase_MA_2	PF13485.1	gi|449066412|ref|YP_007433494.1|	-	7.2e-19	68.1	2.5	2.8e-18	66.2	0.2	2.2	2	0	0	2	2	2	1	Peptidase	MA	superfamily
ERAP1_C	PF11838.3	gi|449066412|ref|YP_007433494.1|	-	7.9e-15	54.9	0.1	1.3e-14	54.1	0.0	1.4	1	0	0	1	1	1	1	ERAP1-like	C-terminal	domain
tRNA-synt_1	PF00133.17	gi|449066413|ref|YP_007433495.1|	-	1.6e-58	198.1	0.0	5.8e-47	160.0	0.0	2.5	2	1	0	2	2	2	2	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1g	PF09334.6	gi|449066413|ref|YP_007433495.1|	-	8.5e-30	103.6	0.5	8.8e-14	50.9	0.0	3.9	4	0	0	4	4	4	3	tRNA	synthetases	class	I	(M)
Anticodon_1	PF08264.8	gi|449066413|ref|YP_007433495.1|	-	4.6e-21	75.1	0.6	1.1e-20	73.8	0.4	1.7	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1_2	PF13603.1	gi|449066413|ref|YP_007433495.1|	-	8e-14	51.3	0.0	1.9e-13	50.0	0.0	1.6	1	0	0	1	1	1	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1e	PF01406.14	gi|449066413|ref|YP_007433495.1|	-	2.3e-13	49.9	0.6	3.3e-05	23.1	0.0	3.4	2	2	1	3	3	3	2	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1f	PF01921.13	gi|449066413|ref|YP_007433495.1|	-	0.0099	14.5	0.0	0.23	10.0	0.0	2.2	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(K)
tRNA-synt_1d	PF00750.14	gi|449066413|ref|YP_007433495.1|	-	0.034	12.9	0.0	0.074	11.8	0.0	1.5	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(R)
Radical_SAM	PF04055.16	gi|449066414|ref|YP_007433496.1|	-	4e-09	36.8	1.0	7.8e-09	35.9	0.0	1.9	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|449066414|ref|YP_007433496.1|	-	4.2e-08	33.4	0.2	1.1e-07	32.0	0.0	1.8	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|449066414|ref|YP_007433496.1|	-	3.2e-06	27.1	0.0	1.3e-05	25.1	0.0	1.9	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Peptidase_M20	PF01546.23	gi|449066415|ref|YP_007433497.1|	-	2.2e-29	102.3	0.0	2.9e-29	101.9	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|449066415|ref|YP_007433497.1|	-	3.4e-17	62.1	0.0	6.3e-17	61.3	0.0	1.4	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
LCD1	PF09798.4	gi|449066416|ref|YP_007433498.1|	-	0.039	11.9	0.1	0.045	11.7	0.1	1.0	1	0	0	1	1	1	0	DNA	damage	checkpoint	protein
14-3-3	PF00244.15	gi|449066416|ref|YP_007433498.1|	-	0.072	12.1	0.0	0.083	11.9	0.0	1.1	1	0	0	1	1	1	0	14-3-3	protein
ATP_bind_3	PF01171.15	gi|449066418|ref|YP_007433500.1|	-	1.1e-14	54.3	0.0	3.1e-14	52.8	0.0	1.7	1	1	0	1	1	1	1	PP-loop	family
ThiI	PF02568.9	gi|449066418|ref|YP_007433500.1|	-	0.00014	21.3	0.0	0.00031	20.2	0.0	1.5	1	1	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
PAPS_reduct	PF01507.14	gi|449066418|ref|YP_007433500.1|	-	0.00019	21.2	0.0	0.00039	20.2	0.0	1.5	1	0	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
RecR	PF02132.10	gi|449066418|ref|YP_007433500.1|	-	0.00075	18.8	3.5	0.0017	17.7	0.7	2.6	2	0	0	2	2	2	1	RecR	protein
tRNA_Me_trans	PF03054.11	gi|449066418|ref|YP_007433500.1|	-	0.0015	17.1	0.0	0.0033	16.0	0.0	1.5	1	1	0	1	1	1	1	tRNA	methyl	transferase
NAD_synthase	PF02540.12	gi|449066418|ref|YP_007433500.1|	-	0.0021	17.0	0.0	0.0032	16.4	0.0	1.3	1	0	0	1	1	1	1	NAD	synthase
Usp	PF00582.21	gi|449066418|ref|YP_007433500.1|	-	0.0027	17.8	0.0	0.39	10.9	0.0	2.8	2	1	1	3	3	3	1	Universal	stress	protein	family
QueC	PF06508.8	gi|449066418|ref|YP_007433500.1|	-	0.026	13.7	0.0	0.18	11.0	0.0	2.1	2	0	0	2	2	2	0	Queuosine	biosynthesis	protein	QueC
Asn_synthase	PF00733.16	gi|449066418|ref|YP_007433500.1|	-	0.029	13.8	0.0	0.038	13.4	0.0	1.3	1	0	0	1	1	1	0	Asparagine	synthase
DZR	PF12773.2	gi|449066418|ref|YP_007433500.1|	-	0.26	11.1	5.4	0.21	11.4	0.5	2.6	3	0	0	3	3	3	0	Double	zinc	ribbon
SfsA	PF03749.8	gi|449066420|ref|YP_007433502.1|	-	1.9e-51	174.5	0.0	2.3e-51	174.3	0.0	1.1	1	0	0	1	1	1	1	Sugar	fermentation	stimulation	protein
SIR2	PF02146.12	gi|449066421|ref|YP_007433503.1|	-	1.5e-51	174.6	0.0	1.8e-51	174.3	0.0	1.1	1	0	0	1	1	1	1	Sir2	family
TPP_enzyme_M	PF00205.17	gi|449066421|ref|YP_007433503.1|	-	0.014	15.1	0.0	0.11	12.2	0.0	2.1	2	0	0	2	2	2	0	Thiamine	pyrophosphate	enzyme,	central	domain
XPG_I	PF00867.13	gi|449066421|ref|YP_007433503.1|	-	0.15	12.1	0.0	0.3	11.1	0.0	1.5	1	0	0	1	1	1	0	XPG	I-region
DUF3311	PF11755.3	gi|449066422|ref|YP_007433504.1|	-	6e-10	38.5	7.7	6.9e-10	38.3	5.3	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3311)
DUF3687	PF12459.3	gi|449066422|ref|YP_007433504.1|	-	1	8.6	8.5	0.061	12.5	1.6	2.1	2	1	0	2	2	2	0	D-Ala-teichoic	acid	biosynthesis	protein
DUF805	PF05656.9	gi|449066422|ref|YP_007433504.1|	-	1.3	8.8	6.3	1.5	8.6	4.4	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF805)
DUF4538	PF15061.1	gi|449066422|ref|YP_007433504.1|	-	2.8	7.3	6.4	0.51	9.6	1.0	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4538)
Sec62	PF03839.11	gi|449066422|ref|YP_007433504.1|	-	5.5	6.3	7.5	5.4	6.3	5.2	1.0	1	0	0	1	1	1	0	Translocation	protein	Sec62
SSF	PF00474.12	gi|449066423|ref|YP_007433505.1|	-	7.5e-14	51.1	31.9	7.5e-14	51.1	22.1	1.5	2	0	0	2	2	2	1	Sodium:solute	symporter	family
CReP_N	PF10472.4	gi|449066423|ref|YP_007433505.1|	-	0.38	9.4	0.6	1.9	7.1	0.0	1.9	2	0	0	2	2	2	0	eIF2-alpha	phosphatase	phosphorylation	constitutive	repressor
Vma12	PF11712.3	gi|449066423|ref|YP_007433505.1|	-	3.1	7.4	8.6	13	5.4	0.1	3.7	3	0	0	3	3	3	0	Endoplasmic	reticulum-based	factor	for	assembly	of	V-ATPase
DUF2203	PF09969.4	gi|449066424|ref|YP_007433506.1|	-	3.3e-36	124.1	0.0	4.7e-36	123.6	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2203)
NAD_binding_2	PF03446.10	gi|449066425|ref|YP_007433507.1|	-	2.2e-36	125.1	0.2	3.2e-36	124.6	0.1	1.2	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_binding_11	PF14833.1	gi|449066425|ref|YP_007433507.1|	-	1.2e-27	96.3	0.0	2e-27	95.6	0.0	1.3	1	0	0	1	1	1	1	NAD-binding	of	NADP-dependent	3-hydroxyisobutyrate	dehydrogenase
F420_oxidored	PF03807.12	gi|449066425|ref|YP_007433507.1|	-	1.8e-07	31.4	0.1	7e-07	29.5	0.0	2.0	3	0	0	3	3	3	1	NADP	oxidoreductase	coenzyme	F420-dependent
2-Hacid_dh_C	PF02826.14	gi|449066425|ref|YP_007433507.1|	-	0.00028	20.0	0.0	0.00062	18.9	0.0	1.6	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Shikimate_DH	PF01488.15	gi|449066425|ref|YP_007433507.1|	-	0.00032	20.8	0.0	0.00066	19.7	0.0	1.6	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
GFO_IDH_MocA	PF01408.17	gi|449066425|ref|YP_007433507.1|	-	0.0069	16.8	0.0	0.017	15.6	0.0	1.7	2	0	0	2	2	2	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
UDPG_MGDP_dh_C	PF03720.10	gi|449066425|ref|YP_007433507.1|	-	0.007	16.4	0.1	0.028	14.5	0.0	1.9	2	0	0	2	2	2	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
BSD	PF03909.12	gi|449066425|ref|YP_007433507.1|	-	0.011	15.4	0.0	0.066	12.9	0.0	2.1	2	0	0	2	2	2	0	BSD	domain
ApbA	PF02558.11	gi|449066425|ref|YP_007433507.1|	-	0.059	12.8	0.0	0.11	11.9	0.0	1.4	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
NfI_DNAbd_pre-N	PF10524.4	gi|449066425|ref|YP_007433507.1|	-	0.084	12.4	0.0	0.67	9.5	0.0	2.1	2	0	0	2	2	2	0	Nuclear	factor	I	protein	pre-N-terminus
5-FTHF_cyc-lig	PF01812.15	gi|449066425|ref|YP_007433507.1|	-	0.12	12.1	0.0	0.2	11.3	0.0	1.3	1	0	0	1	1	1	0	5-formyltetrahydrofolate	cyclo-ligase	family
Rdx	PF10262.4	gi|449066427|ref|YP_007433509.1|	-	2.6e-20	72.2	0.0	2.9e-20	72.0	0.0	1.0	1	0	0	1	1	1	1	Rdx	family
ABC2_membrane	PF01061.19	gi|449066428|ref|YP_007433510.1|	-	3.8e-13	49.0	15.8	3.8e-13	49.0	11.0	2.5	3	0	0	3	3	3	1	ABC-2	type	transporter
ABC2_membrane_4	PF12730.2	gi|449066428|ref|YP_007433510.1|	-	6	5.9	37.8	14	4.7	26.2	1.7	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
ABC_tran	PF00005.22	gi|449066429|ref|YP_007433511.1|	-	2.9e-32	111.8	0.0	4.7e-32	111.1	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|449066429|ref|YP_007433511.1|	-	1.7e-16	61.0	0.0	2.7e-11	43.9	0.0	2.2	1	1	1	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|449066429|ref|YP_007433511.1|	-	9.6e-05	21.5	0.2	0.068	12.2	0.1	2.2	1	1	1	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|449066429|ref|YP_007433511.1|	-	0.00011	21.5	0.3	0.18	10.9	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|449066429|ref|YP_007433511.1|	-	0.00049	19.5	0.0	0.0013	18.1	0.0	1.6	2	0	0	2	2	1	1	P-loop	containing	region	of	AAA	domain
SbcCD_C	PF13558.1	gi|449066429|ref|YP_007433511.1|	-	0.00052	19.8	0.0	0.006	16.4	0.0	2.4	2	1	0	2	2	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_23	PF13476.1	gi|449066429|ref|YP_007433511.1|	-	0.0013	19.1	6.1	0.015	15.6	4.2	2.2	1	1	0	1	1	1	1	AAA	domain
Thymidylate_kin	PF02223.12	gi|449066429|ref|YP_007433511.1|	-	0.0022	17.3	0.0	0.029	13.7	0.0	2.1	2	0	0	2	2	2	1	Thymidylate	kinase
AAA_22	PF13401.1	gi|449066429|ref|YP_007433511.1|	-	0.0029	17.7	0.3	0.03	14.4	0.2	2.4	1	1	0	1	1	1	1	AAA	domain
SRP54	PF00448.17	gi|449066429|ref|YP_007433511.1|	-	0.0071	15.8	0.2	0.012	15.0	0.1	1.3	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
Rad17	PF03215.10	gi|449066429|ref|YP_007433511.1|	-	0.01	14.5	0.0	0.013	14.2	0.0	1.3	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
AAA_30	PF13604.1	gi|449066429|ref|YP_007433511.1|	-	0.017	14.6	0.0	0.036	13.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_25	PF13481.1	gi|449066429|ref|YP_007433511.1|	-	0.018	14.4	0.0	0.045	13.1	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|449066429|ref|YP_007433511.1|	-	0.02	14.3	0.2	0.27	10.6	0.0	2.2	1	1	0	2	2	2	0	AAA-like	domain
AAA_19	PF13245.1	gi|449066429|ref|YP_007433511.1|	-	0.024	14.3	0.0	0.049	13.3	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
Ldh_1_C	PF02866.13	gi|449066429|ref|YP_007433511.1|	-	0.025	14.3	0.0	0.044	13.5	0.0	1.5	1	0	0	1	1	1	0	lactate/malate	dehydrogenase,	alpha/beta	C-terminal	domain
AAA_13	PF13166.1	gi|449066429|ref|YP_007433511.1|	-	0.025	13.0	0.6	0.11	10.9	0.2	2.0	1	1	0	2	2	2	0	AAA	domain
AAA_16	PF13191.1	gi|449066429|ref|YP_007433511.1|	-	0.027	14.4	0.0	0.047	13.6	0.0	1.7	1	1	0	1	1	1	0	AAA	ATPase	domain
UPF0079	PF02367.12	gi|449066429|ref|YP_007433511.1|	-	0.039	13.5	0.1	0.1	12.2	0.0	1.7	2	0	0	2	2	2	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_14	PF13173.1	gi|449066429|ref|YP_007433511.1|	-	0.047	13.5	0.2	1	9.2	0.1	2.4	1	1	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.12	gi|449066429|ref|YP_007433511.1|	-	0.051	12.9	0.3	2.5	7.5	0.1	2.3	2	1	0	2	2	2	0	IstB-like	ATP	binding	protein
T2SE	PF00437.15	gi|449066429|ref|YP_007433511.1|	-	0.061	12.2	0.0	0.091	11.6	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
ATP_bind_1	PF03029.12	gi|449066429|ref|YP_007433511.1|	-	0.078	12.5	0.5	0.2	11.1	0.1	1.7	1	1	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
AAA	PF00004.24	gi|449066429|ref|YP_007433511.1|	-	0.084	13.0	2.4	0.96	9.6	1.6	2.6	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF87	PF01935.12	gi|449066429|ref|YP_007433511.1|	-	0.18	11.5	2.6	0.27	11.0	0.3	2.2	3	0	0	3	3	3	0	Domain	of	unknown	function	DUF87
AIRS_C	PF02769.17	gi|449066430|ref|YP_007433512.1|	-	2.3e-11	43.9	0.0	3.5e-11	43.3	0.0	1.2	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|449066430|ref|YP_007433512.1|	-	5.2e-09	36.2	0.0	1.1e-08	35.1	0.0	1.5	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
NTP_transf_3	PF12804.2	gi|449066431|ref|YP_007433513.1|	-	3.4e-09	36.9	0.0	8.3e-09	35.7	0.0	1.6	1	1	0	1	1	1	1	MobA-like	NTP	transferase	domain
CofC	PF01983.11	gi|449066431|ref|YP_007433513.1|	-	0.092	11.6	0.1	0.17	10.8	0.0	1.5	1	1	0	1	1	1	0	Guanylyl	transferase	CofC	like
NTP_transferase	PF00483.18	gi|449066431|ref|YP_007433513.1|	-	0.1	11.8	0.0	0.13	11.5	0.0	1.3	1	0	0	1	1	1	0	Nucleotidyl	transferase
DUF1614	PF07758.6	gi|449066432|ref|YP_007433514.1|	-	3.6e-49	166.8	12.6	5.7e-49	166.2	8.7	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1614)
Pkr1	PF08636.5	gi|449066432|ref|YP_007433514.1|	-	2	8.5	16.5	0.26	11.3	1.2	3.2	2	1	0	2	2	2	0	ER	protein	Pkr1
TP_methylase	PF00590.15	gi|449066434|ref|YP_007433516.1|	-	8.2e-42	143.2	0.5	1e-41	142.9	0.3	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
TP_methylase	PF00590.15	gi|449066435|ref|YP_007433517.1|	-	1.9e-33	115.9	0.0	2.3e-33	115.6	0.0	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
Methyltransf_18	PF12847.2	gi|449066436|ref|YP_007433518.1|	-	5.6e-12	46.2	0.0	8.1e-12	45.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|449066436|ref|YP_007433518.1|	-	3.5e-11	42.9	0.0	4.7e-11	42.5	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|449066436|ref|YP_007433518.1|	-	3.9e-09	36.3	0.6	1e-08	34.9	0.0	1.7	2	0	0	2	2	2	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
MTS	PF05175.9	gi|449066436|ref|YP_007433518.1|	-	1.3e-07	31.1	0.0	2.7e-07	30.1	0.0	1.5	2	0	0	2	2	2	1	Methyltransferase	small	domain
Methyltransf_3	PF01596.12	gi|449066436|ref|YP_007433518.1|	-	3.8e-07	29.3	0.1	6e-07	28.7	0.0	1.3	1	1	0	1	1	1	1	O-methyltransferase
PrmA	PF06325.8	gi|449066436|ref|YP_007433518.1|	-	1.3e-06	27.7	0.3	1.8e-06	27.2	0.2	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Cons_hypoth95	PF03602.10	gi|449066436|ref|YP_007433518.1|	-	1.4e-06	27.8	0.0	1.7e-06	27.5	0.0	1.3	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltransf_26	PF13659.1	gi|449066436|ref|YP_007433518.1|	-	2.3e-06	27.6	0.0	2.6e-06	27.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_24	PF13578.1	gi|449066436|ref|YP_007433518.1|	-	4e-06	27.6	0.0	5.6e-06	27.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
GidB	PF02527.10	gi|449066436|ref|YP_007433518.1|	-	5.1e-06	25.7	0.1	7.7e-06	25.1	0.1	1.3	1	1	0	1	1	1	1	rRNA	small	subunit	methyltransferase	G
Ubie_methyltran	PF01209.13	gi|449066436|ref|YP_007433518.1|	-	7.8e-06	25.1	0.0	8.7e-06	25.0	0.0	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
GCD14	PF08704.5	gi|449066436|ref|YP_007433518.1|	-	5.7e-05	22.7	0.0	7.2e-05	22.4	0.0	1.1	1	0	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
Met_10	PF02475.11	gi|449066436|ref|YP_007433518.1|	-	0.00036	20.1	0.0	0.00041	19.9	0.0	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_4	PF02390.12	gi|449066436|ref|YP_007433518.1|	-	0.00051	19.1	0.0	0.00077	18.5	0.0	1.3	1	0	0	1	1	1	1	Putative	methyltransferase
UPF0020	PF01170.13	gi|449066436|ref|YP_007433518.1|	-	0.0019	17.8	0.1	0.0035	16.9	0.0	1.4	2	0	0	2	2	2	1	Putative	RNA	methylase	family	UPF0020
CMAS	PF02353.15	gi|449066436|ref|YP_007433518.1|	-	0.0023	17.0	0.0	0.0045	16.1	0.0	1.4	1	1	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
RrnaAD	PF00398.15	gi|449066436|ref|YP_007433518.1|	-	0.0023	16.9	0.0	0.0036	16.3	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_25	PF13649.1	gi|449066436|ref|YP_007433518.1|	-	0.0031	17.8	0.0	0.0046	17.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|449066436|ref|YP_007433518.1|	-	0.01	15.4	0.0	0.014	14.9	0.0	1.2	1	0	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
G3P_antiterm	PF04309.7	gi|449066436|ref|YP_007433518.1|	-	0.012	14.6	0.1	0.022	13.7	0.1	1.4	1	1	0	1	1	1	0	Glycerol-3-phosphate	responsive	antiterminator
Methyltransf_12	PF08242.7	gi|449066436|ref|YP_007433518.1|	-	0.019	15.4	0.0	0.026	14.9	0.0	1.4	1	1	0	1	1	1	0	Methyltransferase	domain
Fibrillarin	PF01269.12	gi|449066436|ref|YP_007433518.1|	-	0.02	13.8	0.0	0.03	13.2	0.0	1.4	1	1	0	1	1	1	0	Fibrillarin
Methyltransf_11	PF08241.7	gi|449066436|ref|YP_007433518.1|	-	0.021	15.3	0.0	0.036	14.5	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
DOT1	PF08123.8	gi|449066436|ref|YP_007433518.1|	-	0.026	13.8	0.0	0.04	13.2	0.0	1.2	1	0	0	1	1	1	0	Histone	methylation	protein	DOT1
Methyltransf_23	PF13489.1	gi|449066436|ref|YP_007433518.1|	-	0.044	13.5	0.0	0.047	13.4	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_5	PF01795.14	gi|449066436|ref|YP_007433518.1|	-	0.053	12.7	0.0	0.069	12.4	0.0	1.2	1	0	0	1	1	1	0	MraW	methylase	family
Methyltransf_16	PF10294.4	gi|449066436|ref|YP_007433518.1|	-	0.077	12.4	0.0	0.17	11.3	0.0	1.5	2	0	0	2	2	2	0	Putative	methyltransferase
CbiD	PF01888.12	gi|449066437|ref|YP_007433519.1|	-	1.6e-64	217.4	3.7	2.3e-64	216.9	2.6	1.2	1	0	0	1	1	1	1	CbiD
TP_methylase	PF00590.15	gi|449066439|ref|YP_007433521.1|	-	4e-37	127.9	0.1	4.7e-37	127.7	0.0	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
CbiC	PF02570.10	gi|449066440|ref|YP_007433522.1|	-	1.2e-53	181.4	0.4	1.6e-53	181.0	0.3	1.2	1	0	0	1	1	1	1	Precorrin-8X	methylmutase
CbiX	PF01903.12	gi|449066440|ref|YP_007433522.1|	-	6.2e-17	61.6	0.0	1.5e-16	60.4	0.0	1.7	1	0	0	1	1	1	1	CbiX
SinI	PF08671.5	gi|449066440|ref|YP_007433522.1|	-	0.044	13.2	0.1	7.7	6.0	0.0	3.3	3	0	0	3	3	3	0	Anti-repressor	SinI
HTH_10	PF04967.7	gi|449066440|ref|YP_007433522.1|	-	0.15	11.6	0.4	2.2	7.9	0.1	2.5	2	0	0	2	2	2	0	HTH	DNA	binding	domain
TP_methylase	PF00590.15	gi|449066441|ref|YP_007433523.1|	-	3.2e-30	105.4	0.0	3.6e-30	105.2	0.0	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
CbiG_N	PF11760.3	gi|449066442|ref|YP_007433524.1|	-	2.2e-30	104.2	0.0	4.8e-30	103.0	0.0	1.6	1	0	0	1	1	1	1	Cobalamin	synthesis	G	N-terminal
CbiG_C	PF01890.11	gi|449066442|ref|YP_007433524.1|	-	2.3e-18	66.5	0.3	4.1e-18	65.7	0.0	1.6	2	0	0	2	2	2	1	Cobalamin	synthesis	G	C-terminus
CbiG_mid	PF11761.3	gi|449066442|ref|YP_007433524.1|	-	0.15	12.2	0.0	0.26	11.5	0.0	1.5	1	0	0	1	1	1	0	Cobalamin	biosynthesis	central	region
Asparaginase_2	PF01112.13	gi|449066443|ref|YP_007433525.1|	-	6.4e-59	199.2	6.8	5.5e-36	123.8	1.4	2.0	1	1	1	2	2	2	2	Asparaginase
Flagellin_IN	PF07196.8	gi|449066443|ref|YP_007433525.1|	-	0.22	11.5	2.8	11	6.0	0.2	3.6	4	0	0	4	4	4	0	Flagellin	hook	IN	motif
CHU_C	PF13585.1	gi|449066446|ref|YP_007433528.1|	-	0.049	13.5	2.4	2.8	7.8	0.1	2.5	2	0	0	2	2	2	0	C-terminal	domain	of	CHU	protein	family
DUF1107	PF06526.7	gi|449066448|ref|YP_007433530.1|	-	0.032	14.0	0.0	0.08	12.7	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1107)
Class_IIIsignal	PF04021.7	gi|449066448|ref|YP_007433530.1|	-	0.84	9.4	4.7	2.5	7.9	3.3	1.9	1	0	0	1	1	1	0	Class	III	signal	peptide
ADH_N	PF08240.7	gi|449066450|ref|YP_007433532.1|	-	3.1e-26	91.2	1.4	4.7e-26	90.6	0.2	1.8	2	0	0	2	2	2	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|449066450|ref|YP_007433532.1|	-	4.1e-21	74.8	0.1	8.1e-21	73.9	0.0	1.5	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
DUF4147	PF13660.1	gi|449066450|ref|YP_007433532.1|	-	0.01	14.9	0.3	0.068	12.2	0.1	2.2	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4147)
CobD_Cbib	PF03186.8	gi|449066451|ref|YP_007433533.1|	-	2.4e-30	105.6	0.0	3e-30	105.3	0.0	1.1	1	0	0	1	1	1	1	CobD/Cbib	protein
TM_helix	PF05552.7	gi|449066451|ref|YP_007433533.1|	-	0.01	15.5	0.3	0.01	15.5	0.2	1.8	2	0	0	2	2	2	1	Conserved	TM	helix
CobS	PF02654.10	gi|449066453|ref|YP_007433535.1|	-	4.1e-29	101.8	12.5	4.9e-29	101.5	8.7	1.0	1	0	0	1	1	1	1	Cobalamin-5-phosphate	synthase
GATase_3	PF07685.9	gi|449066454|ref|YP_007433536.1|	-	9.1e-25	87.0	0.0	1.4e-24	86.4	0.0	1.3	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
CbiA	PF01656.18	gi|449066454|ref|YP_007433536.1|	-	1.8e-12	47.1	0.0	3.3e-12	46.2	0.0	1.4	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_26	PF13500.1	gi|449066454|ref|YP_007433536.1|	-	7.3e-10	38.7	0.0	2.1e-07	30.7	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
GATase	PF00117.23	gi|449066454|ref|YP_007433536.1|	-	0.0016	17.9	0.0	0.0025	17.2	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
SNO	PF01174.14	gi|449066454|ref|YP_007433536.1|	-	0.0042	16.7	0.0	0.0066	16.0	0.0	1.3	1	0	0	1	1	1	1	SNO	glutamine	amidotransferase	family
GMP_synt_C	PF00958.17	gi|449066455|ref|YP_007433537.1|	-	8.1e-23	79.9	0.3	2e-22	78.6	0.2	1.7	1	0	0	1	1	1	1	GMP	synthase	C	terminal	domain
NAD_synthase	PF02540.12	gi|449066455|ref|YP_007433537.1|	-	6.1e-13	48.2	0.2	3.6e-12	45.6	0.1	2.1	1	1	0	1	1	1	1	NAD	synthase
ATP_bind_3	PF01171.15	gi|449066455|ref|YP_007433537.1|	-	7.7e-08	32.0	0.0	1.2e-07	31.3	0.0	1.3	1	0	0	1	1	1	1	PP-loop	family
QueC	PF06508.8	gi|449066455|ref|YP_007433537.1|	-	8.5e-07	28.4	0.0	5.2e-05	22.6	0.0	2.2	1	1	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
DUF1152	PF06626.7	gi|449066455|ref|YP_007433537.1|	-	5.1e-05	22.5	0.6	0.00046	19.3	0.0	2.3	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1152)
ThiI	PF02568.9	gi|449066455|ref|YP_007433537.1|	-	0.0038	16.6	0.1	0.011	15.1	0.0	1.9	2	0	0	2	2	2	1	Thiamine	biosynthesis	protein	(ThiI)
Arginosuc_synth	PF00764.14	gi|449066455|ref|YP_007433537.1|	-	0.01	14.8	0.5	0.016	14.3	0.0	1.5	2	0	0	2	2	2	0	Arginosuccinate	synthase
tRNA_Me_trans	PF03054.11	gi|449066455|ref|YP_007433537.1|	-	0.033	12.7	0.0	0.67	8.4	0.0	2.2	2	0	0	2	2	2	0	tRNA	methyl	transferase
DUF2392	PF10288.4	gi|449066455|ref|YP_007433537.1|	-	0.057	13.7	0.0	0.21	11.9	0.0	2.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2392)
Asn_synthase	PF00733.16	gi|449066455|ref|YP_007433537.1|	-	0.12	11.8	0.0	0.21	11.0	0.0	1.5	1	0	0	1	1	1	0	Asparagine	synthase
Latarcin	PF10279.4	gi|449066455|ref|YP_007433537.1|	-	0.19	11.9	2.0	3.1	8.0	0.1	3.1	3	0	0	3	3	3	0	Latarcin	precursor
Peptidase_M48	PF01435.13	gi|449066456|ref|YP_007433538.1|	-	3.2e-25	89.0	0.0	6.8e-25	87.9	0.0	1.6	1	1	1	2	2	2	1	Peptidase	family	M48
Peptidase_M56	PF05569.6	gi|449066456|ref|YP_007433538.1|	-	0.011	14.6	1.8	0.028	13.3	0.2	2.1	2	1	0	2	2	2	0	BlaR1	peptidase	M56
SUR7	PF06687.7	gi|449066456|ref|YP_007433538.1|	-	0.45	10.0	5.9	0.24	10.9	0.1	2.3	2	0	0	2	2	2	0	SUR7/PalI	family
CBS	PF00571.23	gi|449066457|ref|YP_007433539.1|	-	1.4e-33	114.3	2.2	4.8e-16	58.2	0.1	2.1	2	0	0	2	2	2	2	CBS	domain
RHH_4	PF13467.1	gi|449066458|ref|YP_007433540.1|	-	0.00031	20.5	0.1	0.00039	20.2	0.1	1.3	1	1	0	1	1	1	1	Ribbon-helix-helix	domain
RHH_1	PF01402.16	gi|449066458|ref|YP_007433540.1|	-	0.0087	15.9	0.0	0.087	12.7	0.0	2.0	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
RHH_3	PF12651.2	gi|449066458|ref|YP_007433540.1|	-	0.093	12.4	0.1	0.17	11.6	0.0	1.5	1	0	0	1	1	1	0	Ribbon-helix-helix	domain
Polysacc_synt_3	PF13440.1	gi|449066459|ref|YP_007433541.1|	-	1.2e-26	93.7	32.6	1.2e-26	93.7	22.6	2.5	2	1	0	2	2	2	1	Polysaccharide	biosynthesis	protein
DeoC	PF01791.4	gi|449066460|ref|YP_007433542.1|	-	3.4e-32	111.6	0.0	4e-32	111.3	0.0	1.0	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
DUF3201	PF11447.3	gi|449066460|ref|YP_007433542.1|	-	0.048	13.0	0.1	0.072	12.4	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3201)
AP_endonuc_2	PF01261.19	gi|449066460|ref|YP_007433542.1|	-	0.051	12.8	0.0	0.12	11.6	0.0	1.7	2	0	0	2	2	2	0	Xylose	isomerase-like	TIM	barrel
PMT_2	PF13231.1	gi|449066461|ref|YP_007433543.1|	-	6.6e-08	32.5	13.5	6.6e-08	32.5	9.3	3.1	3	1	0	3	3	3	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
PMT	PF02366.13	gi|449066461|ref|YP_007433543.1|	-	0.00086	18.7	12.8	0.00086	18.7	8.9	4.1	2	1	2	4	4	4	2	Dolichyl-phosphate-mannose-protein	mannosyltransferase
NTP_transferase	PF00483.18	gi|449066462|ref|YP_007433544.1|	-	1.5e-28	99.8	0.0	1.8e-28	99.4	0.0	1.0	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|449066462|ref|YP_007433544.1|	-	3.2e-09	37.0	0.0	3.8e-09	36.8	0.0	1.3	1	1	0	1	1	1	1	MobA-like	NTP	transferase	domain
Glycos_transf_2	PF00535.21	gi|449066462|ref|YP_007433544.1|	-	0.047	13.3	0.0	0.068	12.8	0.0	1.1	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
Epimerase	PF01370.16	gi|449066463|ref|YP_007433545.1|	-	4.4e-22	78.6	0.0	6.7e-22	78.0	0.0	1.3	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
UDPG_MGDP_dh_N	PF03721.9	gi|449066463|ref|YP_007433545.1|	-	0.00049	19.5	0.0	0.00092	18.6	0.0	1.4	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
RmlD_sub_bind	PF04321.12	gi|449066463|ref|YP_007433545.1|	-	0.00087	18.2	0.0	0.0039	16.1	0.0	2.0	1	1	0	1	1	1	1	RmlD	substrate	binding	domain
Polysacc_synt_2	PF02719.10	gi|449066463|ref|YP_007433545.1|	-	0.0016	17.3	0.0	0.0031	16.4	0.0	1.4	1	0	0	1	1	1	1	Polysaccharide	biosynthesis	protein
KR	PF08659.5	gi|449066463|ref|YP_007433545.1|	-	0.07	12.7	0.0	0.18	11.4	0.0	1.6	2	0	0	2	2	2	0	KR	domain
NAD_binding_2	PF03446.10	gi|449066463|ref|YP_007433545.1|	-	0.16	11.7	0.0	0.37	10.6	0.0	1.7	1	1	1	2	2	2	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
BcrAD_BadFG	PF01869.15	gi|449066464|ref|YP_007433546.1|	-	1.4e-44	152.4	1.8	1.6e-44	152.2	1.3	1.0	1	0	0	1	1	1	1	BadF/BadG/BcrA/BcrD	ATPase	family
G_glu_transpept	PF01019.16	gi|449066465|ref|YP_007433547.1|	-	8.3e-90	301.6	0.0	1.2e-89	301.1	0.0	1.2	1	0	0	1	1	1	1	Gamma-glutamyltranspeptidase
MazG	PF03819.12	gi|449066467|ref|YP_007433549.1|	-	4.3e-15	55.4	0.7	5.8e-15	55.0	0.5	1.2	1	0	0	1	1	1	1	MazG	nucleotide	pyrophosphohydrolase	domain
PRA-PH	PF01503.12	gi|449066467|ref|YP_007433549.1|	-	0.00014	22.1	2.4	0.00047	20.3	1.8	1.7	1	1	0	1	1	1	1	Phosphoribosyl-ATP	pyrophosphohydrolase
MazG-like	PF12643.2	gi|449066467|ref|YP_007433549.1|	-	0.00078	19.3	0.1	0.0012	18.7	0.0	1.3	1	0	0	1	1	1	1	MazG-like	family
UpxZ	PF06603.6	gi|449066467|ref|YP_007433549.1|	-	0.044	13.8	0.1	0.048	13.6	0.0	1.1	1	0	0	1	1	1	0	UpxZ	family	of	transcription	anti-terminator	antagonists
Helicase_RecD	PF05127.9	gi|449066468|ref|YP_007433550.1|	-	7e-48	162.5	0.0	1.1e-47	161.9	0.0	1.3	1	0	0	1	1	1	1	Helicase
GNAT_acetyltr_2	PF13718.1	gi|449066468|ref|YP_007433550.1|	-	6.7e-42	143.0	0.0	3.4e-41	140.7	0.0	2.0	1	1	0	1	1	1	1	GNAT	acetyltransferase	2
DUF1726	PF08351.6	gi|449066468|ref|YP_007433550.1|	-	1.9e-24	85.1	0.1	4.3e-24	84.0	0.0	1.7	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1726)
Acetyltransf_7	PF13508.1	gi|449066468|ref|YP_007433550.1|	-	6e-06	26.3	0.0	3.3e-05	23.9	0.0	2.3	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.19	gi|449066468|ref|YP_007433550.1|	-	4.7e-05	23.3	0.0	0.00014	21.8	0.0	1.8	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
tRNA_bind_2	PF13725.1	gi|449066468|ref|YP_007433550.1|	-	0.00042	20.3	0.0	0.0019	18.2	0.0	2.0	1	1	1	2	2	2	1	Possible	tRNA	binding	domain
YfhO	PF09586.5	gi|449066469|ref|YP_007433551.1|	-	1.9	6.4	9.2	2.3	6.1	6.4	1.1	1	0	0	1	1	1	0	Bacterial	membrane	protein	YfhO
YfdX	PF10938.3	gi|449066470|ref|YP_007433552.1|	-	0.015	14.9	0.2	0.035	13.7	0.1	1.5	1	1	0	1	1	1	0	YfdX	protein
23S_rRNA_IVP	PF05635.6	gi|449066470|ref|YP_007433552.1|	-	0.02	14.7	0.1	0.031	14.2	0.1	1.3	1	0	0	1	1	1	0	23S	rRNA-intervening	sequence	protein
UPF0253	PF06786.7	gi|449066470|ref|YP_007433552.1|	-	0.026	14.6	0.0	0.04	14.0	0.0	1.3	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0253)
Mad3_BUB1_I	PF08311.7	gi|449066470|ref|YP_007433552.1|	-	0.039	13.7	0.0	0.061	13.1	0.0	1.3	1	0	0	1	1	1	0	Mad3/BUB1	homology	region	1
DUF566	PF04484.7	gi|449066470|ref|YP_007433552.1|	-	0.053	13.0	0.0	0.059	12.8	0.0	1.1	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF566)
Exonuc_VII_S	PF02609.11	gi|449066470|ref|YP_007433552.1|	-	0.067	12.9	0.4	0.57	9.9	0.0	2.4	2	1	0	2	2	2	0	Exonuclease	VII	small	subunit
AA_permease_2	PF13520.1	gi|449066471|ref|YP_007433553.1|	-	5.9e-15	54.7	45.8	1.5e-14	53.3	31.8	1.5	1	1	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|449066471|ref|YP_007433553.1|	-	1.7e-14	53.0	40.9	3e-14	52.2	26.9	2.1	1	1	0	1	1	1	1	Amino	acid	permease
DUF2583	PF10762.4	gi|449066471|ref|YP_007433553.1|	-	0.96	9.6	9.8	1.3	9.1	0.4	3.4	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2583)
PHO4	PF01384.15	gi|449066472|ref|YP_007433554.1|	-	0.0044	15.7	2.5	0.0049	15.5	1.7	1.0	1	0	0	1	1	1	1	Phosphate	transporter	family
DsbB	PF02600.11	gi|449066472|ref|YP_007433554.1|	-	0.0089	15.8	2.2	0.0099	15.6	1.5	1.0	1	0	0	1	1	1	1	Disulfide	bond	formation	protein	DsbB
PrgI	PF12666.2	gi|449066472|ref|YP_007433554.1|	-	0.081	13.0	1.2	0.093	12.8	0.8	1.1	1	0	0	1	1	1	0	PrgI	family	protein
DUF4383	PF14325.1	gi|449066472|ref|YP_007433554.1|	-	0.085	12.8	1.5	0.1	12.6	1.0	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4383)
DUF2614	PF11023.3	gi|449066472|ref|YP_007433554.1|	-	0.25	11.1	2.6	0.29	10.9	1.8	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2614)
DUF4199	PF13858.1	gi|449066472|ref|YP_007433554.1|	-	0.29	11.0	3.9	0.31	10.9	2.7	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4199)
DUF3040	PF11239.3	gi|449066472|ref|YP_007433554.1|	-	0.34	10.9	2.9	0.41	10.7	2.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3040)
PCMT	PF01135.14	gi|449066473|ref|YP_007433555.1|	-	2.5e-43	148.0	0.0	3.1e-43	147.7	0.0	1.0	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_18	PF12847.2	gi|449066473|ref|YP_007433555.1|	-	4.8e-09	36.7	0.0	7.1e-09	36.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|449066473|ref|YP_007433555.1|	-	2.6e-08	33.2	0.0	4.3e-08	32.5	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_26	PF13659.1	gi|449066473|ref|YP_007433555.1|	-	6.3e-07	29.4	0.0	8.5e-07	29.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|449066473|ref|YP_007433555.1|	-	1.5e-06	27.8	0.0	2e-06	27.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|449066473|ref|YP_007433555.1|	-	8.2e-06	25.1	0.0	1.1e-05	24.6	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
MTS	PF05175.9	gi|449066473|ref|YP_007433555.1|	-	3.6e-05	23.2	0.0	5.6e-05	22.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_23	PF13489.1	gi|449066473|ref|YP_007433555.1|	-	4.8e-05	23.1	0.0	7.5e-05	22.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
DOT1	PF08123.8	gi|449066473|ref|YP_007433555.1|	-	8.6e-05	21.9	0.1	0.00013	21.3	0.0	1.2	1	0	0	1	1	1	1	Histone	methylation	protein	DOT1
Methyltransf_3	PF01596.12	gi|449066473|ref|YP_007433555.1|	-	0.00018	20.6	0.0	0.00026	20.1	0.0	1.2	1	0	0	1	1	1	1	O-methyltransferase
GCD14	PF08704.5	gi|449066473|ref|YP_007433555.1|	-	0.0002	20.9	0.0	0.00029	20.4	0.0	1.2	1	0	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
Fibrillarin	PF01269.12	gi|449066473|ref|YP_007433555.1|	-	0.0017	17.3	0.1	0.0027	16.6	0.0	1.3	1	0	0	1	1	1	1	Fibrillarin
Methyltransf_11	PF08241.7	gi|449066473|ref|YP_007433555.1|	-	0.0019	18.6	0.0	0.0044	17.4	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.15	gi|449066473|ref|YP_007433555.1|	-	0.0043	16.1	0.0	0.011	14.8	0.0	1.6	2	0	0	2	2	2	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_25	PF13649.1	gi|449066473|ref|YP_007433555.1|	-	0.0068	16.7	0.0	0.011	16.1	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Met_10	PF02475.11	gi|449066473|ref|YP_007433555.1|	-	0.01	15.4	0.0	0.015	14.8	0.0	1.3	1	0	0	1	1	1	0	Met-10+	like-protein
Methyltransf_4	PF02390.12	gi|449066473|ref|YP_007433555.1|	-	0.062	12.3	0.0	0.098	11.6	0.0	1.4	1	0	0	1	1	1	0	Putative	methyltransferase
Methyltransf_24	PF13578.1	gi|449066473|ref|YP_007433555.1|	-	0.11	13.3	0.0	0.22	12.3	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
DUF87	PF01935.12	gi|449066474|ref|YP_007433556.1|	-	2e-17	63.8	3.6	9.6e-17	61.5	0.7	2.6	1	1	1	2	2	2	1	Domain	of	unknown	function	DUF87
AAA_10	PF12846.2	gi|449066474|ref|YP_007433556.1|	-	1.9e-12	47.2	0.5	3.9e-12	46.2	0.4	1.5	1	1	0	1	1	1	1	AAA-like	domain
FtsK_SpoIIIE	PF01580.13	gi|449066474|ref|YP_007433556.1|	-	2.2e-06	27.2	0.1	0.05	13.0	0.0	2.3	2	0	0	2	2	2	2	FtsK/SpoIIIE	family
Zot	PF05707.7	gi|449066474|ref|YP_007433556.1|	-	0.017	14.6	0.1	0.045	13.2	0.0	1.8	2	0	0	2	2	2	0	Zonular	occludens	toxin	(Zot)
DEAD	PF00270.24	gi|449066474|ref|YP_007433556.1|	-	0.045	13.2	0.0	2.8	7.4	0.0	2.3	2	0	0	2	2	2	0	DEAD/DEAH	box	helicase
IMS	PF00817.15	gi|449066474|ref|YP_007433556.1|	-	0.14	11.9	0.0	0.33	10.7	0.0	1.6	1	0	0	1	1	1	0	impB/mucB/samB	family
NurA	PF09376.5	gi|449066475|ref|YP_007433557.1|	-	2.8e-16	59.7	0.2	7.3e-08	32.1	0.0	2.1	1	1	1	2	2	2	2	NurA	domain
Aldolase_2	PF10120.4	gi|449066476|ref|YP_007433558.1|	-	4.3e-46	156.3	0.4	7.6e-46	155.5	0.3	1.3	1	0	0	1	1	1	1	Putative	aldolase
Epimerase_2	PF02350.14	gi|449066476|ref|YP_007433558.1|	-	0.026	13.3	0.3	0.048	12.4	0.1	1.4	2	0	0	2	2	2	0	UDP-N-acetylglucosamine	2-epimerase
MA3	PF02847.12	gi|449066476|ref|YP_007433558.1|	-	0.029	14.0	1.5	0.046	13.4	0.1	2.0	2	0	0	2	2	2	0	MA3	domain
INTS5_N	PF14837.1	gi|449066476|ref|YP_007433558.1|	-	0.034	13.5	0.0	0.054	12.9	0.0	1.3	1	0	0	1	1	1	0	Integrator	complex	subunit	5	N-terminus
DUF3929	PF13066.1	gi|449066477|ref|YP_007433559.1|	-	0.14	11.9	0.3	0.97	9.2	0.2	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3929)
Peptidase_M50	PF02163.17	gi|449066479|ref|YP_007433561.1|	-	1.9e-12	46.5	10.0	1.9e-12	46.5	6.9	1.9	2	1	0	2	2	2	1	Peptidase	family	M50
DUF4492	PF14899.1	gi|449066479|ref|YP_007433561.1|	-	0.031	13.7	1.0	0.073	12.5	0.7	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4492)
Rhomboid	PF01694.17	gi|449066480|ref|YP_007433562.1|	-	8.8e-22	77.6	6.1	8.8e-22	77.6	4.2	1.9	2	0	0	2	2	2	1	Rhomboid	family
DUF4234	PF14018.1	gi|449066480|ref|YP_007433562.1|	-	3.7	7.3	17.4	0.58	9.9	5.3	3.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4234)
DUF3816	PF12822.2	gi|449066480|ref|YP_007433562.1|	-	5.2	6.9	20.8	7	6.4	11.5	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3816)
PAP2	PF01569.16	gi|449066480|ref|YP_007433562.1|	-	6.7	6.4	12.9	15	5.2	4.8	2.9	1	1	1	2	2	2	0	PAP2	superfamily
DUF2975	PF11188.3	gi|449066481|ref|YP_007433563.1|	-	0.03	14.0	0.9	0.03	14.0	0.7	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2975)
DUF1206	PF06724.6	gi|449066481|ref|YP_007433563.1|	-	0.039	13.7	0.6	0.14	11.9	0.0	1.8	2	0	0	2	2	2	0	Domain	of	Unknown	Function	(DUF1206)
Tetraspannin	PF00335.15	gi|449066481|ref|YP_007433563.1|	-	0.39	9.9	3.5	0.42	9.8	2.4	1.1	1	0	0	1	1	1	0	Tetraspanin	family
AAA_18	PF13238.1	gi|449066482|ref|YP_007433564.1|	-	9.8e-22	77.6	0.3	9.8e-22	77.6	0.2	1.7	2	0	0	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|449066482|ref|YP_007433564.1|	-	6.4e-14	52.8	0.4	1.6e-13	51.4	0.2	1.8	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|449066482|ref|YP_007433564.1|	-	3.5e-07	30.4	0.1	1.3e-06	28.6	0.0	1.9	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_5	PF07728.9	gi|449066482|ref|YP_007433564.1|	-	1.7e-06	27.7	0.0	3.2e-06	26.9	0.0	1.4	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_33	PF13671.1	gi|449066482|ref|YP_007433564.1|	-	2.7e-06	27.3	0.0	2.6e-05	24.1	0.0	2.1	1	1	0	1	1	1	1	AAA	domain
SKI	PF01202.17	gi|449066482|ref|YP_007433564.1|	-	3.1e-06	27.1	0.1	5.7e-06	26.2	0.1	1.6	1	1	0	1	1	1	1	Shikimate	kinase
KTI12	PF08433.5	gi|449066482|ref|YP_007433564.1|	-	0.00032	19.9	0.0	0.00081	18.6	0.0	1.7	2	0	0	2	2	2	1	Chromatin	associated	protein	KTI12
Zeta_toxin	PF06414.7	gi|449066482|ref|YP_007433564.1|	-	0.00036	19.7	0.4	0.0016	17.5	0.3	2.1	1	1	0	1	1	1	1	Zeta	toxin
AAA_28	PF13521.1	gi|449066482|ref|YP_007433564.1|	-	0.00041	20.3	0.9	0.001	19.0	0.3	1.8	1	1	1	2	2	2	1	AAA	domain
AAA_19	PF13245.1	gi|449066482|ref|YP_007433564.1|	-	0.00044	19.9	0.0	0.0015	18.2	0.0	1.8	2	0	0	2	2	2	1	Part	of	AAA	domain
Cytidylate_kin2	PF13189.1	gi|449066482|ref|YP_007433564.1|	-	0.00048	20.0	0.2	0.0025	17.7	0.0	1.9	1	1	1	2	2	2	1	Cytidylate	kinase-like	family
DUF2075	PF09848.4	gi|449066482|ref|YP_007433564.1|	-	0.0012	17.8	0.0	0.0018	17.3	0.0	1.3	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_22	PF13401.1	gi|449066482|ref|YP_007433564.1|	-	0.0014	18.7	0.3	0.0024	17.9	0.2	1.9	1	1	0	1	1	1	1	AAA	domain
T2SE	PF00437.15	gi|449066482|ref|YP_007433564.1|	-	0.0025	16.7	0.0	0.0036	16.2	0.0	1.4	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
RuvB_N	PF05496.7	gi|449066482|ref|YP_007433564.1|	-	0.0034	16.4	0.0	0.0062	15.6	0.0	1.5	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_16	PF13191.1	gi|449066482|ref|YP_007433564.1|	-	0.0034	17.4	0.2	0.0049	16.8	0.1	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
NTPase_1	PF03266.10	gi|449066482|ref|YP_007433564.1|	-	0.0047	16.6	1.2	0.015	14.9	0.1	2.2	2	1	0	2	2	2	1	NTPase
RNA_helicase	PF00910.17	gi|449066482|ref|YP_007433564.1|	-	0.011	15.9	0.0	0.028	14.5	0.0	1.8	1	1	0	1	1	1	0	RNA	helicase
APS_kinase	PF01583.15	gi|449066482|ref|YP_007433564.1|	-	0.012	15.2	0.1	0.11	12.2	0.1	2.1	2	0	0	2	2	2	0	Adenylylsulphate	kinase
PRK	PF00485.13	gi|449066482|ref|YP_007433564.1|	-	0.012	15.1	0.2	0.053	13.0	0.0	2.0	2	1	1	3	3	2	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_3	PF07726.6	gi|449066482|ref|YP_007433564.1|	-	0.013	15.0	0.0	0.026	14.1	0.0	1.4	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_14	PF13173.1	gi|449066482|ref|YP_007433564.1|	-	0.018	14.9	0.7	0.035	14.0	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
AAA_24	PF13479.1	gi|449066482|ref|YP_007433564.1|	-	0.02	14.4	0.9	0.02	14.4	0.6	1.8	2	1	0	2	2	2	0	AAA	domain
ResIII	PF04851.10	gi|449066482|ref|YP_007433564.1|	-	0.021	14.6	0.4	0.053	13.3	0.0	1.7	1	1	1	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
Viral_helicase1	PF01443.13	gi|449066482|ref|YP_007433564.1|	-	0.021	14.3	0.0	0.11	11.9	0.0	1.9	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
TIP49	PF06068.8	gi|449066482|ref|YP_007433564.1|	-	0.027	13.1	0.0	0.04	12.6	0.0	1.4	1	0	0	1	1	1	0	TIP49	C-terminus
AAA_30	PF13604.1	gi|449066482|ref|YP_007433564.1|	-	0.027	14.0	0.1	0.077	12.5	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
CPT	PF07931.7	gi|449066482|ref|YP_007433564.1|	-	0.037	13.6	0.0	0.043	13.4	0.0	1.3	1	0	0	1	1	1	0	Chloramphenicol	phosphotransferase-like	protein
ADK	PF00406.17	gi|449066482|ref|YP_007433564.1|	-	0.039	13.8	0.1	0.1	12.4	0.1	2.1	1	1	0	1	1	1	0	Adenylate	kinase
Thymidylate_kin	PF02223.12	gi|449066482|ref|YP_007433564.1|	-	0.059	12.7	0.5	0.19	11.0	0.1	2.0	1	1	1	2	2	2	0	Thymidylate	kinase
MobB	PF03205.9	gi|449066482|ref|YP_007433564.1|	-	0.066	12.9	1.2	0.13	11.9	0.1	1.9	2	1	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NACHT	PF05729.7	gi|449066482|ref|YP_007433564.1|	-	0.07	12.7	0.0	0.15	11.7	0.0	1.6	1	0	0	1	1	1	0	NACHT	domain
AAA_11	PF13086.1	gi|449066482|ref|YP_007433564.1|	-	0.074	12.6	0.0	0.085	12.4	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.12	gi|449066482|ref|YP_007433564.1|	-	0.08	12.3	0.5	0.37	10.1	0.1	2.1	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
cobW	PF02492.14	gi|449066482|ref|YP_007433564.1|	-	0.1	12.0	0.7	0.47	9.8	0.1	2.1	1	1	1	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_25	PF13481.1	gi|449066482|ref|YP_007433564.1|	-	0.12	11.7	0.2	0.22	10.8	0.1	1.4	1	0	0	1	1	1	0	AAA	domain
ATP_bind_1	PF03029.12	gi|449066482|ref|YP_007433564.1|	-	0.12	11.8	0.2	0.49	9.9	0.0	1.9	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
DUF4375	PF14300.1	gi|449066482|ref|YP_007433564.1|	-	0.23	11.4	3.9	0.54	10.2	0.4	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4375)
CbiA	PF01656.18	gi|449066482|ref|YP_007433564.1|	-	3.5	6.9	5.1	16	4.8	3.6	2.1	1	1	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ParA	PF10609.4	gi|449066483|ref|YP_007433565.1|	-	3.4e-31	106.9	0.1	1.3e-30	105.1	0.0	2.0	2	0	0	2	2	2	1	ParA/MinD	ATPase	like
CbiA	PF01656.18	gi|449066483|ref|YP_007433565.1|	-	7.2e-17	61.4	0.1	1.2e-16	60.7	0.0	1.3	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Fer4_NifH	PF00142.13	gi|449066483|ref|YP_007433565.1|	-	4.6e-10	39.1	0.2	7e-05	22.1	0.1	2.3	2	0	0	2	2	2	2	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
AAA_31	PF13614.1	gi|449066483|ref|YP_007433565.1|	-	3.6e-07	30.2	0.0	2.4e-06	27.5	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
ArsA_ATPase	PF02374.10	gi|449066483|ref|YP_007433565.1|	-	3.7e-06	26.2	0.4	4.2e-05	22.7	0.3	2.1	2	0	0	2	2	2	1	Anion-transporting	ATPase
MipZ	PF09140.6	gi|449066483|ref|YP_007433565.1|	-	9.3e-06	24.9	0.0	1.4e-05	24.3	0.0	1.3	1	0	0	1	1	1	1	ATPase	MipZ
AAA_10	PF12846.2	gi|449066483|ref|YP_007433565.1|	-	5.4e-05	22.7	0.1	6.2e-05	22.5	0.0	1.2	1	0	0	1	1	1	1	AAA-like	domain
ArgK	PF03308.11	gi|449066483|ref|YP_007433565.1|	-	0.00062	18.6	0.1	0.0011	17.8	0.1	1.3	1	0	0	1	1	1	1	ArgK	protein
AAA_25	PF13481.1	gi|449066483|ref|YP_007433565.1|	-	0.00078	18.8	0.0	0.0018	17.6	0.0	1.6	2	0	0	2	2	2	1	AAA	domain
AAA_26	PF13500.1	gi|449066483|ref|YP_007433565.1|	-	0.0017	18.0	0.2	1.6	8.3	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
IstB_IS21	PF01695.12	gi|449066483|ref|YP_007433565.1|	-	0.16	11.3	0.0	0.29	10.5	0.0	1.4	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
DUF4364	PF14277.1	gi|449066484|ref|YP_007433566.1|	-	0.0007	19.2	0.1	0.00076	19.1	0.1	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
HeH	PF12949.2	gi|449066484|ref|YP_007433566.1|	-	0.072	12.6	0.2	0.28	10.7	0.0	2.1	2	1	1	3	3	3	0	HeH/LEM	domain
Arg_repressor	PF01316.16	gi|449066484|ref|YP_007433566.1|	-	0.3	10.6	2.2	0.48	10.0	1.2	1.6	1	1	1	2	2	2	0	Arginine	repressor,	DNA	binding	domain
Takusan	PF04822.8	gi|449066484|ref|YP_007433566.1|	-	0.87	9.3	3.1	16	5.3	0.1	2.2	1	1	1	2	2	2	0	Takusan
TrmB	PF01978.14	gi|449066485|ref|YP_007433567.1|	-	9.9e-13	47.5	0.2	1.3e-12	47.2	0.1	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|449066485|ref|YP_007433567.1|	-	5.9e-08	32.2	0.0	1e-07	31.5	0.0	1.4	1	0	0	1	1	1	1	MarR	family
TFIIE_alpha	PF02002.12	gi|449066485|ref|YP_007433567.1|	-	1.1e-06	28.0	0.8	1.4e-06	27.7	0.5	1.1	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HTH_5	PF01022.15	gi|449066485|ref|YP_007433567.1|	-	2.3e-06	27.1	0.5	4.9e-05	22.9	0.2	2.5	2	1	1	3	3	3	1	Bacterial	regulatory	protein,	arsR	family
MarR	PF01047.17	gi|449066485|ref|YP_007433567.1|	-	0.00023	20.7	0.1	0.00035	20.2	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.1	gi|449066485|ref|YP_007433567.1|	-	0.00025	20.3	0.1	0.00058	19.1	0.1	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
Rrf2	PF02082.15	gi|449066485|ref|YP_007433567.1|	-	0.00045	20.2	0.0	0.00083	19.4	0.0	1.4	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_34	PF13601.1	gi|449066485|ref|YP_007433567.1|	-	0.00046	20.1	0.1	0.00069	19.6	0.1	1.4	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
Fe_dep_repress	PF01325.14	gi|449066485|ref|YP_007433567.1|	-	0.00047	20.0	0.5	0.0015	18.4	0.1	2.0	2	1	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DUF2250	PF10007.4	gi|449066485|ref|YP_007433567.1|	-	0.0013	18.5	0.3	0.0022	17.8	0.1	1.5	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_27	PF13463.1	gi|449066485|ref|YP_007433567.1|	-	0.0016	18.6	0.1	0.0037	17.5	0.0	1.6	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
PadR	PF03551.9	gi|449066485|ref|YP_007433567.1|	-	0.0019	17.9	0.0	0.0037	17.0	0.0	1.6	1	1	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_20	PF12840.2	gi|449066485|ref|YP_007433567.1|	-	0.0041	16.8	0.0	0.0075	16.0	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
YugN	PF08868.5	gi|449066485|ref|YP_007433567.1|	-	0.018	14.6	0.0	0.022	14.3	0.0	1.1	1	0	0	1	1	1	0	YugN-like	family
DUF4423	PF14394.1	gi|449066485|ref|YP_007433567.1|	-	0.024	14.1	0.2	0.051	13.1	0.1	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
Replic_Relax	PF13814.1	gi|449066485|ref|YP_007433567.1|	-	0.029	14.2	0.0	0.031	14.1	0.0	1.2	1	0	0	1	1	1	0	Replication-relaxation
HTH_23	PF13384.1	gi|449066485|ref|YP_007433567.1|	-	0.029	14.0	0.0	0.17	11.5	0.0	2.0	2	0	0	2	2	2	0	Homeodomain-like	domain
GPP34	PF05719.6	gi|449066485|ref|YP_007433567.1|	-	0.031	14.3	0.0	0.033	14.2	0.0	1.1	1	0	0	1	1	1	0	Golgi	phosphoprotein	3	(GPP34)
DUF2680	PF10925.3	gi|449066485|ref|YP_007433567.1|	-	0.06	13.2	0.0	0.11	12.3	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2680)
RPA_C	PF08784.6	gi|449066485|ref|YP_007433567.1|	-	0.075	13.4	0.0	0.16	12.4	0.0	1.5	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
Cdc6_C	PF09079.6	gi|449066485|ref|YP_007433567.1|	-	0.13	11.9	0.4	0.3	10.8	0.0	1.8	2	0	0	2	2	2	0	CDC6,	C	terminal
HTH_45	PF14947.1	gi|449066485|ref|YP_007433567.1|	-	0.14	11.9	0.9	0.22	11.3	0.1	1.7	2	0	0	2	2	2	0	Winged	helix-turn-helix
5-FTHF_cyc-lig	PF01812.15	gi|449066486|ref|YP_007433568.1|	-	1.5e-31	109.6	0.0	1.7e-31	109.4	0.0	1.1	1	0	0	1	1	1	1	5-formyltetrahydrofolate	cyclo-ligase	family
YcaO	PF02624.11	gi|449066486|ref|YP_007433568.1|	-	0.023	14.1	0.0	0.04	13.3	0.0	1.3	1	0	0	1	1	1	0	YcaO-like	family
LysE	PF01810.13	gi|449066487|ref|YP_007433569.1|	-	1.2e-26	93.2	18.1	1.5e-26	92.8	12.6	1.1	1	0	0	1	1	1	1	LysE	type	translocator
RALF	PF05498.6	gi|449066487|ref|YP_007433569.1|	-	0.096	13.5	0.1	0.2	12.4	0.0	1.6	2	0	0	2	2	2	0	Rapid	ALkalinization	Factor	(RALF)
DUF1129	PF06570.6	gi|449066487|ref|YP_007433569.1|	-	3.5	6.8	9.7	0.068	12.4	1.6	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1129)
HTH_23	PF13384.1	gi|449066488|ref|YP_007433570.1|	-	3.8e-15	54.9	1.1	0.0001	21.7	0.1	3.2	3	0	0	3	3	3	3	Homeodomain-like	domain
HTH_38	PF13936.1	gi|449066488|ref|YP_007433570.1|	-	4.8e-15	54.8	5.3	1.8e-06	27.4	0.1	3.3	3	0	0	3	3	3	3	Helix-turn-helix	domain
HTH_7	PF02796.10	gi|449066488|ref|YP_007433570.1|	-	1.8e-14	53.3	8.8	0.0008	19.2	0.0	3.2	3	0	0	3	3	3	3	Helix-turn-helix	domain	of	resolvase
HTH_28	PF13518.1	gi|449066488|ref|YP_007433570.1|	-	9.3e-12	44.7	2.0	0.00079	19.3	0.1	3.2	3	0	0	3	3	3	2	Helix-turn-helix	domain
HTH_Tnp_ISL3	PF13542.1	gi|449066488|ref|YP_007433570.1|	-	1e-09	37.3	0.0	7.7e-05	21.7	0.0	3.0	3	0	0	3	3	3	2	Helix-turn-helix	domain	of	transposase	family	ISL3
GerE	PF00196.14	gi|449066488|ref|YP_007433570.1|	-	1.2e-09	37.2	1.5	0.0011	18.1	0.0	3.4	3	0	0	3	3	3	2	Bacterial	regulatory	proteins,	luxR	family
Sigma70_r4_2	PF08281.7	gi|449066488|ref|YP_007433570.1|	-	6.3e-09	35.1	1.5	0.006	16.0	0.0	3.2	3	0	0	3	3	3	3	Sigma-70,	region	4
GcrA	PF07750.6	gi|449066488|ref|YP_007433570.1|	-	1.3e-08	35.2	0.6	0.00087	19.5	0.0	2.2	1	1	1	2	2	2	2	GcrA	cell	cycle	regulator
HTH_29	PF13551.1	gi|449066488|ref|YP_007433570.1|	-	1.5e-06	28.3	0.4	0.15	12.2	0.0	3.1	2	1	1	3	3	3	2	Winged	helix-turn	helix
HTH_Tnp_IS1	PF12759.2	gi|449066488|ref|YP_007433570.1|	-	1.8e-05	24.0	0.3	0.061	12.7	0.0	2.9	3	0	0	3	3	3	2	InsA	C-terminal	domain
Terminase_5	PF06056.7	gi|449066488|ref|YP_007433570.1|	-	1.9e-05	24.0	0.1	0.51	9.9	0.0	3.1	3	0	0	3	3	3	2	Putative	ATPase	subunit	of	terminase	(gpP-like)
Sigma70_r4	PF04545.11	gi|449066488|ref|YP_007433570.1|	-	3.3e-05	23.1	0.7	0.035	13.4	0.0	3.1	3	0	0	3	3	3	1	Sigma-70,	region	4
HTH_24	PF13412.1	gi|449066488|ref|YP_007433570.1|	-	4.6e-05	22.7	5.2	0.088	12.2	0.0	3.6	4	0	0	4	4	3	1	Winged	helix-turn-helix	DNA-binding
CENP-B_N	PF04218.8	gi|449066488|ref|YP_007433570.1|	-	5.2e-05	22.5	1.9	0.01	15.2	0.1	2.6	2	0	0	2	2	2	1	CENP-B	N-terminal	DNA-binding	domain
HTH_10	PF04967.7	gi|449066488|ref|YP_007433570.1|	-	6.3e-05	22.4	1.3	0.091	12.3	0.0	3.4	3	0	0	3	3	3	1	HTH	DNA	binding	domain
TrmB	PF01978.14	gi|449066488|ref|YP_007433570.1|	-	0.0001	21.9	1.5	0.12	12.0	0.0	3.1	3	0	0	3	3	3	1	Sugar-specific	transcriptional	regulator	TrmB
DUF3791	PF12668.2	gi|449066488|ref|YP_007433570.1|	-	0.00011	21.7	0.8	1.7	8.2	0.0	3.8	2	1	2	4	4	4	1	Protein	of	unknown	function	(DUF3791)
HTH_Tnp_IS630	PF01710.11	gi|449066488|ref|YP_007433570.1|	-	0.00036	20.1	3.1	0.014	15.0	0.7	2.3	1	1	1	2	2	2	1	Transposase
CPSase_L_D3	PF02787.14	gi|449066488|ref|YP_007433570.1|	-	0.0004	20.1	2.5	0.92	9.2	0.1	2.8	1	1	1	2	2	2	2	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
HTH_40	PF14493.1	gi|449066488|ref|YP_007433570.1|	-	0.00063	19.9	2.0	1.5	9.1	0.0	3.2	1	1	1	3	3	3	1	Helix-turn-helix	domain
Recombinase	PF07508.8	gi|449066488|ref|YP_007433570.1|	-	0.00064	19.9	1.1	1.9	8.7	0.0	3.1	3	0	0	3	3	3	1	Recombinase
Phage_antitermQ	PF06530.7	gi|449066488|ref|YP_007433570.1|	-	0.0012	18.4	4.5	0.042	13.4	0.1	2.8	1	1	2	3	3	3	1	Phage	antitermination	protein	Q
HTH_3	PF01381.17	gi|449066488|ref|YP_007433570.1|	-	0.0022	17.8	3.4	0.5	10.2	0.3	3.3	2	1	1	3	3	3	1	Helix-turn-helix
KorB	PF08535.5	gi|449066488|ref|YP_007433570.1|	-	0.0063	16.6	0.4	1.1	9.4	0.0	3.2	2	1	0	3	3	3	1	KorB	domain
PAX	PF00292.13	gi|449066488|ref|YP_007433570.1|	-	0.0072	16.0	0.2	0.044	13.5	0.1	2.1	1	1	1	2	2	2	1	'Paired	box'	domain
Mga	PF05043.8	gi|449066488|ref|YP_007433570.1|	-	0.008	16.4	2.5	1.6	9.0	0.0	2.9	1	1	1	3	3	3	1	Mga	helix-turn-helix	domain
HTH_Tnp_1	PF01527.15	gi|449066488|ref|YP_007433570.1|	-	0.01	15.7	0.1	0.76	9.7	0.0	2.8	3	0	0	3	3	3	0	Transposase
IF2_N	PF04760.10	gi|449066488|ref|YP_007433570.1|	-	0.011	15.3	5.4	1.8	8.2	0.0	3.9	2	2	1	3	3	3	0	Translation	initiation	factor	IF-2,	N-terminal	region
Death	PF00531.17	gi|449066488|ref|YP_007433570.1|	-	0.013	15.2	0.1	0.45	10.3	0.0	2.5	2	1	0	2	2	2	0	Death	domain
TGT	PF01702.13	gi|449066488|ref|YP_007433570.1|	-	0.017	14.4	0.1	0.033	13.4	0.0	1.3	1	1	0	1	1	1	0	Queuine	tRNA-ribosyltransferase
HTH_11	PF08279.7	gi|449066488|ref|YP_007433570.1|	-	0.017	14.7	2.7	8.6	6.0	0.1	3.5	2	1	1	3	3	3	0	HTH	domain
DUF2089	PF09862.4	gi|449066488|ref|YP_007433570.1|	-	0.025	14.3	3.1	0.048	13.4	0.6	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2089)
HTH_5	PF01022.15	gi|449066488|ref|YP_007433570.1|	-	0.033	13.8	0.3	13	5.5	0.0	3.5	3	1	0	3	3	3	0	Bacterial	regulatory	protein,	arsR	family
Ribosomal_S13	PF00416.17	gi|449066488|ref|YP_007433570.1|	-	0.036	14.5	5.4	0.82	10.1	1.2	2.4	1	1	1	2	2	2	0	Ribosomal	protein	S13/S18
NUMOD1	PF07453.8	gi|449066488|ref|YP_007433570.1|	-	0.04	13.7	2.5	0.47	10.3	0.0	3.0	3	0	0	3	3	2	0	NUMOD1	domain
MRP-L20	PF12824.2	gi|449066488|ref|YP_007433570.1|	-	0.04	13.8	1.8	1.9	8.3	0.1	2.2	1	1	1	2	2	2	0	Mitochondrial	ribosomal	protein	subunit	L20
HTH_AsnC-type	PF13404.1	gi|449066488|ref|YP_007433570.1|	-	0.043	13.3	0.0	1.5	8.3	0.0	2.8	3	0	0	3	3	3	0	AsnC-type	helix-turn-helix	domain
Sigma70_ECF	PF07638.6	gi|449066488|ref|YP_007433570.1|	-	0.056	13.0	0.4	1.1	8.8	0.1	2.4	1	1	1	2	2	2	0	ECF	sigma	factor
Arc_PepC	PF06819.6	gi|449066488|ref|YP_007433570.1|	-	0.079	12.8	3.5	3.1	7.7	0.8	2.4	2	1	0	2	2	2	0	Archaeal	Peptidase	A24	C-terminal	Domain
MarR_2	PF12802.2	gi|449066488|ref|YP_007433570.1|	-	0.1	12.2	0.1	16	5.2	0.0	2.8	3	1	0	3	3	2	0	MarR	family
HTH_36	PF13730.1	gi|449066488|ref|YP_007433570.1|	-	0.11	12.5	2.2	6.5	6.9	0.0	3.2	3	1	0	3	3	3	0	Helix-turn-helix	domain
ANT	PF03374.9	gi|449066488|ref|YP_007433570.1|	-	0.13	12.3	0.6	3.8	7.6	0.0	2.6	2	1	1	3	3	2	0	Phage	antirepressor	protein	KilAC	domain
DUF771	PF05595.6	gi|449066488|ref|YP_007433570.1|	-	0.13	12.2	1.2	1.5	8.7	0.1	2.5	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF771)
Multi-haem_cyto	PF13447.1	gi|449066488|ref|YP_007433570.1|	-	0.16	11.0	0.1	0.2	10.6	0.1	1.1	1	0	0	1	1	1	0	Seven	times	multi-haem	cytochrome	CxxCH
AF0941-like	PF14591.1	gi|449066488|ref|YP_007433570.1|	-	0.23	11.5	3.9	0.86	9.6	0.3	2.3	1	1	0	2	2	2	0	AF0941-like
HTH_26	PF13443.1	gi|449066488|ref|YP_007433570.1|	-	0.53	10.5	2.8	6.5	7.0	0.1	2.9	2	1	0	2	2	2	0	Cro/C1-type	HTH	DNA-binding	domain
tRNA-synt_1b	PF00579.20	gi|449066489|ref|YP_007433571.1|	-	7e-26	91.0	0.0	1.1e-25	90.4	0.0	1.3	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(W	and	Y)
Snf7	PF03357.16	gi|449066490|ref|YP_007433572.1|	-	0.00099	18.5	1.1	0.0015	17.9	0.8	1.3	1	0	0	1	1	1	1	Snf7
LOH1CR12	PF10158.4	gi|449066490|ref|YP_007433572.1|	-	0.0018	18.0	0.8	0.0041	16.9	0.4	1.7	1	1	0	1	1	1	1	Tumour	suppressor	protein
Pox_F11	PF04943.7	gi|449066490|ref|YP_007433572.1|	-	0.016	14.0	0.1	0.019	13.8	0.0	1.2	1	0	0	1	1	1	0	Poxvirus	F11	protein
DUF3958	PF13125.1	gi|449066490|ref|YP_007433572.1|	-	0.073	12.9	0.1	0.14	12.0	0.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3958)
tRNA_SAD	PF07973.9	gi|449066491|ref|YP_007433573.1|	-	7.2e-14	51.3	0.7	1.4e-13	50.5	0.5	1.5	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
tRNA-synt_2c	PF01411.14	gi|449066491|ref|YP_007433573.1|	-	8.4e-14	50.7	0.2	1.2e-13	50.2	0.2	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(A)
GtrA	PF04138.9	gi|449066492|ref|YP_007433574.1|	-	4.9e-19	68.4	11.4	6.9e-19	67.9	7.9	1.2	1	0	0	1	1	1	1	GtrA-like	protein
p12I	PF12233.3	gi|449066492|ref|YP_007433574.1|	-	0.38	11.0	3.5	3.1	8.1	0.7	2.2	2	0	0	2	2	2	0	Human	adult	T	cell	leukemia/lymphoma	virus	protein
Keratin_assoc	PF09775.4	gi|449066492|ref|YP_007433574.1|	-	1.4	8.4	5.7	0.59	9.6	2.1	1.7	1	1	1	2	2	2	0	Keratinocyte-associated	protein	2
Aminotran_1_2	PF00155.16	gi|449066493|ref|YP_007433575.1|	-	7.1e-11	41.6	0.0	1.5e-09	37.2	0.0	2.1	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
HTH_10	PF04967.7	gi|449066494|ref|YP_007433576.1|	-	1.9e-20	72.1	0.1	3.3e-20	71.3	0.1	1.4	1	0	0	1	1	1	1	HTH	DNA	binding	domain
HTH_24	PF13412.1	gi|449066494|ref|YP_007433576.1|	-	8e-06	25.1	1.0	0.002	17.4	0.2	2.6	2	0	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
HTH_28	PF13518.1	gi|449066494|ref|YP_007433576.1|	-	0.01	15.8	0.2	0.02	14.9	0.1	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
Mga	PF05043.8	gi|449066494|ref|YP_007433576.1|	-	0.026	14.8	0.6	0.17	12.2	0.4	2.2	1	1	0	1	1	1	0	Mga	helix-turn-helix	domain
MarR_2	PF12802.2	gi|449066494|ref|YP_007433576.1|	-	0.039	13.6	0.0	0.098	12.3	0.0	1.7	2	0	0	2	2	2	0	MarR	family
HTH_3	PF01381.17	gi|449066494|ref|YP_007433576.1|	-	0.045	13.5	0.3	0.12	12.2	0.0	1.9	2	0	0	2	2	2	0	Helix-turn-helix
HTH_Mga	PF08280.6	gi|449066494|ref|YP_007433576.1|	-	0.064	13.0	0.0	0.17	11.6	0.0	1.7	1	0	0	1	1	1	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_AsnC-type	PF13404.1	gi|449066494|ref|YP_007433576.1|	-	0.081	12.4	0.3	2.7	7.5	0.3	2.4	2	0	0	2	2	2	0	AsnC-type	helix-turn-helix	domain
MarR	PF01047.17	gi|449066494|ref|YP_007433576.1|	-	0.095	12.4	0.1	0.24	11.1	0.1	1.6	1	0	0	1	1	1	0	MarR	family
HTH_11	PF08279.7	gi|449066494|ref|YP_007433576.1|	-	0.12	12.0	1.4	0.82	9.3	0.4	2.5	1	1	1	2	2	2	0	HTH	domain
HTH_27	PF13463.1	gi|449066494|ref|YP_007433576.1|	-	0.14	12.5	0.2	0.44	10.8	0.1	1.8	1	1	1	2	2	2	0	Winged	helix	DNA-binding	domain
ENT	PF03735.9	gi|449066494|ref|YP_007433576.1|	-	0.27	10.9	5.5	0.13	12.0	0.9	2.5	2	1	0	2	2	2	0	ENT	domain
Fer4	PF00037.22	gi|449066495|ref|YP_007433577.1|	-	4.1e-14	51.5	13.6	3.5e-07	29.5	4.1	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|449066495|ref|YP_007433577.1|	-	1.7e-11	44.2	6.9	2.2e-11	43.8	4.8	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|449066495|ref|YP_007433577.1|	-	4.4e-10	38.9	13.8	4.1e-06	26.4	3.8	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|449066495|ref|YP_007433577.1|	-	1.9e-09	37.7	6.7	2.8e-09	37.2	4.6	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|449066495|ref|YP_007433577.1|	-	3.4e-09	36.3	18.3	3.4e-07	29.9	5.2	1.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|449066495|ref|YP_007433577.1|	-	1.6e-08	34.3	5.5	2e-08	33.9	3.8	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|449066495|ref|YP_007433577.1|	-	1.1e-07	31.7	10.4	6.8e-06	26.0	4.8	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|449066495|ref|YP_007433577.1|	-	1.1e-06	28.2	11.7	0.0036	17.1	0.7	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|449066495|ref|YP_007433577.1|	-	6.3e-06	26.0	8.3	0.017	15.3	2.3	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|449066495|ref|YP_007433577.1|	-	1e-05	25.7	14.6	0.0077	16.7	4.6	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|449066495|ref|YP_007433577.1|	-	1.6e-05	25.1	0.6	0.2	12.0	0.0	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|449066495|ref|YP_007433577.1|	-	3.6e-05	24.2	9.6	0.037	14.6	0.1	2.4	2	1	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.1	gi|449066495|ref|YP_007433577.1|	-	6.7e-05	23.1	9.2	0.047	14.0	0.2	2.3	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_16	PF13484.1	gi|449066495|ref|YP_007433577.1|	-	0.00041	21.0	8.3	0.0068	17.1	1.6	2.2	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_18	PF13746.1	gi|449066495|ref|YP_007433577.1|	-	0.0017	18.7	11.2	0.0082	16.5	2.1	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
DUF2761	PF10959.3	gi|449066495|ref|YP_007433577.1|	-	0.025	14.1	0.0	0.036	13.6	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2761)
DFP	PF04127.10	gi|449066496|ref|YP_007433578.1|	-	7.4e-58	195.2	0.2	2.9e-56	190.0	0.0	2.4	2	1	0	2	2	2	1	DNA	/	pantothenate	metabolism	flavoprotein
Flavoprotein	PF02441.14	gi|449066496|ref|YP_007433578.1|	-	1.4e-30	105.5	0.2	3.8e-30	104.2	0.2	1.8	1	0	0	1	1	1	1	Flavoprotein
ATP-synt_F	PF01990.12	gi|449066496|ref|YP_007433578.1|	-	0.052	13.9	1.8	0.77	10.1	0.0	3.1	3	2	1	4	4	4	0	ATP	synthase	(F/14-kDa)	subunit
Acetyltransf_1	PF00583.19	gi|449066497|ref|YP_007433579.1|	-	2.2e-16	59.6	0.0	3.2e-16	59.1	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|449066497|ref|YP_007433579.1|	-	1.2e-07	31.7	0.0	2.1e-07	30.9	0.0	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|449066497|ref|YP_007433579.1|	-	2.3e-07	30.9	0.1	4.2e-07	30.0	0.1	1.5	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.1	gi|449066497|ref|YP_007433579.1|	-	1.8e-06	27.9	0.0	2.6e-06	27.3	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|449066497|ref|YP_007433579.1|	-	2.4e-06	27.2	0.0	3.6e-06	26.6	0.0	1.3	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_10	PF13673.1	gi|449066497|ref|YP_007433579.1|	-	3.1e-06	27.2	0.0	4.3e-06	26.8	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|449066497|ref|YP_007433579.1|	-	7.4e-05	22.6	0.0	0.00033	20.5	0.0	1.9	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.1	gi|449066497|ref|YP_007433579.1|	-	0.0012	19.0	0.0	0.0016	18.5	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Metallophos_2	PF12850.2	gi|449066498|ref|YP_007433580.1|	-	8.8e-06	25.6	0.0	1.1e-05	25.2	0.0	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos_3	PF14582.1	gi|449066498|ref|YP_007433580.1|	-	0.00024	20.3	0.0	0.0024	17.0	0.0	2.0	1	1	1	2	2	2	1	Metallophosphoesterase,	calcineurin	superfamily
Thr_dehydrat_C	PF00585.13	gi|449066498|ref|YP_007433580.1|	-	0.084	12.4	0.5	0.79	9.3	0.0	2.5	1	1	2	3	3	3	0	C-terminal	regulatory	domain	of	Threonine	dehydratase
CitG	PF01874.11	gi|449066499|ref|YP_007433581.1|	-	1.6e-40	139.0	0.0	1.8e-40	138.9	0.0	1.0	1	0	0	1	1	1	1	ATP:dephospho-CoA	triphosphoribosyl	transferase
NTP_transf_2	PF01909.18	gi|449066500|ref|YP_007433582.1|	-	1.2e-08	35.1	0.5	3.5e-08	33.6	0.4	1.8	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
DUF1464	PF07318.7	gi|449066501|ref|YP_007433583.1|	-	1.5e-102	342.9	0.0	2.7e-102	342.1	0.0	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1464)
PIN	PF01850.16	gi|449066504|ref|YP_007433586.1|	-	2.5e-13	50.4	2.1	4.2e-13	49.6	1.5	1.3	1	1	0	1	1	1	1	PIN	domain
Ribosomal_L18ae	PF01775.12	gi|449066504|ref|YP_007433586.1|	-	0.033	14.0	0.3	0.055	13.3	0.2	1.4	1	1	0	1	1	1	0	Ribosomal	L18ae/LX	protein	domain
YolD	PF08863.5	gi|449066504|ref|YP_007433586.1|	-	0.39	10.6	3.1	1.8	8.4	0.1	2.2	2	0	0	2	2	2	0	YolD-like	protein
DUF217	PF02697.9	gi|449066505|ref|YP_007433587.1|	-	8.3e-28	96.4	1.3	9.3e-28	96.2	0.9	1.0	1	0	0	1	1	1	1	Uncharacterized	ACR,	COG1753
DegV	PF02645.11	gi|449066505|ref|YP_007433587.1|	-	0.016	14.2	0.1	0.018	14.1	0.1	1.0	1	0	0	1	1	1	0	Uncharacterised	protein,	DegV	family	COG1307
DUF3387	PF11867.3	gi|449066505|ref|YP_007433587.1|	-	0.04	12.8	0.4	0.046	12.6	0.3	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3387)
CAAP1	PF15335.1	gi|449066505|ref|YP_007433587.1|	-	0.09	12.9	0.0	0.14	12.3	0.0	1.3	1	0	0	1	1	1	0	Caspase	activity	and	apoptosis	inhibitor	1
AAA_10	PF12846.2	gi|449066506|ref|YP_007433588.1|	-	6.4e-09	35.6	0.2	1.2e-08	34.7	0.1	1.5	1	0	0	1	1	1	1	AAA-like	domain
DUF87	PF01935.12	gi|449066506|ref|YP_007433588.1|	-	0.00016	21.5	0.3	0.0006	19.6	0.1	2.0	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF87
NurA	PF09376.5	gi|449066507|ref|YP_007433589.1|	-	1.8e-06	27.6	0.5	9.4e-06	25.2	0.2	2.1	2	0	0	2	2	2	1	NurA	domain
PAPS_reduct	PF01507.14	gi|449066508|ref|YP_007433590.1|	-	1.2e-16	61.0	0.0	2.6e-16	59.9	0.0	1.5	1	0	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
ATP_bind_3	PF01171.15	gi|449066508|ref|YP_007433590.1|	-	0.0069	15.8	0.0	0.26	10.7	0.0	2.4	2	0	0	2	2	2	1	PP-loop	family
QueC	PF06508.8	gi|449066508|ref|YP_007433590.1|	-	0.015	14.6	0.0	0.07	12.4	0.0	2.1	3	0	0	3	3	3	0	Queuosine	biosynthesis	protein	QueC
TniB	PF05621.6	gi|449066508|ref|YP_007433590.1|	-	0.028	13.2	0.0	0.25	10.0	0.0	1.9	2	0	0	2	2	2	0	Bacterial	TniB	protein
NAD_synthase	PF02540.12	gi|449066508|ref|YP_007433590.1|	-	0.13	11.1	0.0	0.2	10.5	0.0	1.3	1	0	0	1	1	1	0	NAD	synthase
VirArc_Nuclease	PF12187.3	gi|449066509|ref|YP_007433591.1|	-	2.5e-103	343.4	7.6	2.9e-103	343.2	5.3	1.0	1	0	0	1	1	1	1	Viral/Archaeal	nuclease
YvfG	PF09628.5	gi|449066510|ref|YP_007433592.1|	-	0.098	12.8	0.4	0.16	12.1	0.3	1.3	1	0	0	1	1	1	0	YvfG	protein
DUF4600	PF15372.1	gi|449066510|ref|YP_007433592.1|	-	0.1	12.8	4.6	0.11	12.6	3.2	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4600)
Toxin_63	PF15541.1	gi|449066510|ref|YP_007433592.1|	-	0.13	12.2	0.1	0.14	12.1	0.1	1.0	1	0	0	1	1	1	0	Putative	toxin	63
YebO	PF13974.1	gi|449066510|ref|YP_007433592.1|	-	0.93	9.3	3.4	1.1	9.0	2.3	1.3	1	1	0	1	1	1	0	YebO-like	protein
RHH_1	PF01402.16	gi|449066511|ref|YP_007433593.1|	-	4.7e-07	29.4	0.5	5.5e-07	29.2	0.3	1.1	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
RHH_3	PF12651.2	gi|449066511|ref|YP_007433593.1|	-	8.6e-06	25.3	0.8	9.7e-06	25.2	0.6	1.1	1	0	0	1	1	1	1	Ribbon-helix-helix	domain
SWIM	PF04434.12	gi|449066512|ref|YP_007433594.1|	-	0.0021	17.4	1.3	0.0032	16.8	0.9	1.2	1	0	0	1	1	1	1	SWIM	zinc	finger
DUF3920	PF13058.1	gi|449066513|ref|YP_007433595.1|	-	0.027	14.2	0.5	0.086	12.6	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3920)
HTH_45	PF14947.1	gi|449066515|ref|YP_007433597.1|	-	0.00064	19.4	0.4	0.00082	19.1	0.3	1.1	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_27	PF13463.1	gi|449066515|ref|YP_007433597.1|	-	0.0031	17.8	0.1	0.0045	17.2	0.1	1.4	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_20	PF12840.2	gi|449066515|ref|YP_007433597.1|	-	0.021	14.6	0.1	0.046	13.5	0.0	1.6	1	1	0	1	1	1	0	Helix-turn-helix	domain
TrmB	PF01978.14	gi|449066515|ref|YP_007433597.1|	-	0.04	13.6	0.3	0.079	12.6	0.2	1.6	1	1	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
DUF4364	PF14277.1	gi|449066515|ref|YP_007433597.1|	-	0.051	13.1	0.1	0.055	13.0	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4364)
FrhB_FdhB_C	PF04432.8	gi|449066515|ref|YP_007433597.1|	-	0.1	11.9	0.0	0.11	11.8	0.0	1.2	1	0	0	1	1	1	0	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	C	terminus
HTH_45	PF14947.1	gi|449066516|ref|YP_007433598.1|	-	0.00011	21.9	1.5	0.00015	21.5	1.1	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix
PARP_reg	PF02877.9	gi|449066516|ref|YP_007433598.1|	-	0.0007	19.2	0.3	0.00092	18.8	0.2	1.1	1	0	0	1	1	1	1	Poly(ADP-ribose)	polymerase,	regulatory	domain
DUF4364	PF14277.1	gi|449066516|ref|YP_007433598.1|	-	0.0076	15.8	0.6	0.0096	15.5	0.4	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
DUF4393	PF14337.1	gi|449066516|ref|YP_007433598.1|	-	0.023	14.1	0.2	0.025	14.0	0.1	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4393)
PadR	PF03551.9	gi|449066516|ref|YP_007433598.1|	-	0.038	13.7	0.6	0.06	13.1	0.4	1.4	1	1	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
HemN_C	PF06969.11	gi|449066516|ref|YP_007433598.1|	-	0.038	14.0	0.0	0.065	13.2	0.0	1.4	1	0	0	1	1	1	0	HemN	C-terminal	domain
DUF1495	PF07381.6	gi|449066516|ref|YP_007433598.1|	-	0.055	13.1	1.2	0.45	10.2	0.8	2.0	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain	(DUF1495)
HTH_27	PF13463.1	gi|449066516|ref|YP_007433598.1|	-	0.12	12.7	0.0	0.17	12.2	0.0	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
PadR	PF03551.9	gi|449066517|ref|YP_007433599.1|	-	0.00066	19.3	2.4	0.0048	16.6	0.1	2.4	2	1	0	2	2	2	1	Transcriptional	regulator	PadR-like	family
USP7_C2	PF14533.1	gi|449066517|ref|YP_007433599.1|	-	0.014	14.8	0.8	0.019	14.4	0.6	1.2	1	0	0	1	1	1	0	Ubiquitin-specific	protease	C-terminal
HxlR	PF01638.12	gi|449066517|ref|YP_007433599.1|	-	0.068	12.8	2.2	1.1	8.9	0.2	2.3	1	1	1	2	2	2	0	HxlR-like	helix-turn-helix
HTH_45	PF14947.1	gi|449066517|ref|YP_007433599.1|	-	0.078	12.8	1.3	0.21	11.4	0.2	2.4	2	2	0	2	2	2	0	Winged	helix-turn-helix
DUF749	PF05370.6	gi|449066517|ref|YP_007433599.1|	-	0.1	12.5	0.9	0.27	11.1	0.1	2.1	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF749)
TrmB	PF01978.14	gi|449066517|ref|YP_007433599.1|	-	0.13	11.9	1.7	0.28	10.9	0.1	2.2	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
SieB	PF14163.1	gi|449066517|ref|YP_007433599.1|	-	0.97	8.9	3.6	1.1	8.7	0.4	2.3	1	1	1	2	2	2	0	Superinfection	exclusion	protein	B
DUF3116	PF11313.3	gi|449066517|ref|YP_007433599.1|	-	3.4	7.3	6.5	2.2	7.9	0.3	2.4	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3116)
HTH_27	PF13463.1	gi|449066518|ref|YP_007433600.1|	-	0.00011	22.5	0.1	0.00015	21.9	0.0	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_34	PF13601.1	gi|449066518|ref|YP_007433600.1|	-	0.00045	20.1	0.0	0.00056	19.8	0.0	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|449066518|ref|YP_007433600.1|	-	0.00051	19.6	0.0	0.00073	19.1	0.0	1.2	1	0	0	1	1	1	1	MarR	family
PadR	PF03551.9	gi|449066518|ref|YP_007433600.1|	-	0.0006	19.5	0.0	0.00086	19.0	0.0	1.3	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
TrmB	PF01978.14	gi|449066518|ref|YP_007433600.1|	-	0.0058	16.3	0.1	0.009	15.7	0.0	1.5	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_45	PF14947.1	gi|449066518|ref|YP_007433600.1|	-	0.011	15.5	0.1	0.02	14.6	0.1	1.5	1	1	0	1	1	1	0	Winged	helix-turn-helix
HTH_IclR	PF09339.5	gi|449066518|ref|YP_007433600.1|	-	0.014	14.9	0.0	0.03	13.9	0.0	1.5	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_Tnp_ISL3	PF13542.1	gi|449066518|ref|YP_007433600.1|	-	0.025	13.7	0.1	0.12	11.5	0.0	1.9	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	transposase	family	ISL3
DIRP	PF06584.8	gi|449066518|ref|YP_007433600.1|	-	0.045	13.6	0.1	0.05	13.4	0.0	1.2	1	0	0	1	1	1	0	DIRP
DUF2250	PF10007.4	gi|449066518|ref|YP_007433600.1|	-	0.08	12.8	0.2	0.16	11.8	0.1	1.5	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_20	PF12840.2	gi|449066518|ref|YP_007433600.1|	-	0.1	12.3	0.0	0.17	11.6	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
TrmB	PF01978.14	gi|449066519|ref|YP_007433601.1|	-	1.5e-08	34.1	0.2	2.3e-08	33.5	0.1	1.4	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HxlR	PF01638.12	gi|449066519|ref|YP_007433601.1|	-	2.5e-05	23.8	0.3	3.1e-05	23.4	0.2	1.2	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_27	PF13463.1	gi|449066519|ref|YP_007433601.1|	-	6.9e-05	23.0	0.0	0.00011	22.4	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_5	PF01022.15	gi|449066519|ref|YP_007433601.1|	-	0.00021	20.8	0.5	0.00045	19.8	0.4	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
MarR_2	PF12802.2	gi|449066519|ref|YP_007433601.1|	-	0.0003	20.4	0.1	0.00047	19.7	0.1	1.4	1	0	0	1	1	1	1	MarR	family
HTH_34	PF13601.1	gi|449066519|ref|YP_007433601.1|	-	0.0013	18.6	0.1	0.0016	18.4	0.1	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_24	PF13412.1	gi|449066519|ref|YP_007433601.1|	-	0.0017	17.7	0.2	0.0024	17.1	0.1	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_45	PF14947.1	gi|449066519|ref|YP_007433601.1|	-	0.013	15.2	0.0	0.022	14.5	0.0	1.3	1	1	0	1	1	1	0	Winged	helix-turn-helix
FeoC	PF09012.5	gi|449066519|ref|YP_007433601.1|	-	0.015	15.0	0.5	0.028	14.0	0.0	1.6	2	0	0	2	2	2	0	FeoC	like	transcriptional	regulator
MarR	PF01047.17	gi|449066519|ref|YP_007433601.1|	-	0.016	14.8	0.2	0.025	14.2	0.1	1.3	1	0	0	1	1	1	0	MarR	family
PadR	PF03551.9	gi|449066519|ref|YP_007433601.1|	-	0.016	14.9	0.0	0.024	14.3	0.0	1.4	1	1	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
DUF2250	PF10007.4	gi|449066519|ref|YP_007433601.1|	-	0.025	14.5	0.3	0.034	14.0	0.1	1.4	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF4393	PF14337.1	gi|449066519|ref|YP_007433601.1|	-	0.041	13.3	0.2	0.067	12.6	0.1	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4393)
DUF1495	PF07381.6	gi|449066519|ref|YP_007433601.1|	-	0.047	13.3	0.2	0.7	9.5	0.1	2.1	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain	(DUF1495)
GntR	PF00392.16	gi|449066519|ref|YP_007433601.1|	-	0.056	12.8	0.1	0.1	12.0	0.1	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
HTH_20	PF12840.2	gi|449066519|ref|YP_007433601.1|	-	0.056	13.2	1.0	0.089	12.6	0.4	1.6	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_9	PF08221.6	gi|449066519|ref|YP_007433601.1|	-	0.066	13.0	1.0	0.086	12.7	0.2	1.5	2	0	0	2	2	2	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
B12-binding_2	PF02607.12	gi|449066519|ref|YP_007433601.1|	-	0.086	12.8	0.1	0.14	12.2	0.0	1.4	1	0	0	1	1	1	0	B12	binding	domain
Antitoxin-MazE	PF04014.13	gi|449066521|ref|YP_007433603.1|	-	0.0015	18.2	0.0	0.002	17.8	0.0	1.2	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
MGDG_synth	PF06925.6	gi|449066522|ref|YP_007433604.1|	-	0.051	13.4	0.2	0.071	13.0	0.1	1.3	1	1	0	1	1	1	0	Monogalactosyldiacylglycerol	(MGDG)	synthase
OrfB_IS605	PF01385.14	gi|449066523|ref|YP_007433605.1|	-	2.7e-71	239.5	1.9	3.7e-71	239.1	1.3	1.2	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.6	gi|449066523|ref|YP_007433605.1|	-	1.5e-19	69.4	0.5	3.3e-19	68.3	0.1	1.9	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
UPF0081	PF03652.10	gi|449066523|ref|YP_007433605.1|	-	0.12	12.4	0.0	0.25	11.4	0.0	1.5	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0081)
MarR	PF01047.17	gi|449066524|ref|YP_007433606.1|	-	7.6e-07	28.7	0.0	1.1e-06	28.2	0.0	1.2	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.1	gi|449066524|ref|YP_007433606.1|	-	3.2e-05	23.2	0.2	4.6e-05	22.7	0.2	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_5	PF01022.15	gi|449066524|ref|YP_007433606.1|	-	0.00024	20.7	0.3	0.00041	19.9	0.2	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
MarR_2	PF12802.2	gi|449066524|ref|YP_007433606.1|	-	0.00038	20.0	0.0	0.00052	19.6	0.0	1.2	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|449066524|ref|YP_007433606.1|	-	0.0012	18.5	0.1	0.0015	18.2	0.1	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_20	PF12840.2	gi|449066524|ref|YP_007433606.1|	-	0.0079	15.9	0.1	0.01	15.5	0.1	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_36	PF13730.1	gi|449066524|ref|YP_007433606.1|	-	0.02	14.9	0.3	0.045	13.8	0.1	1.7	2	1	0	2	2	2	0	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|449066524|ref|YP_007433606.1|	-	0.026	14.1	0.1	0.035	13.7	0.1	1.2	1	0	0	1	1	1	0	HTH	domain
HTH_IclR	PF09339.5	gi|449066524|ref|YP_007433606.1|	-	0.07	12.7	0.3	0.11	12.1	0.2	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
B-block_TFIIIC	PF04182.7	gi|449066524|ref|YP_007433606.1|	-	0.089	12.6	0.0	0.11	12.4	0.0	1.2	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
Fe_dep_repress	PF01325.14	gi|449066524|ref|YP_007433606.1|	-	0.11	12.5	0.3	0.29	11.1	0.2	1.8	1	1	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_27	PF13463.1	gi|449066524|ref|YP_007433606.1|	-	0.11	12.7	0.1	0.16	12.2	0.0	1.3	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|449066525|ref|YP_007433607.1|	-	1.9e-08	33.8	0.2	2.5e-08	33.4	0.2	1.2	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.1	gi|449066525|ref|YP_007433607.1|	-	9.1e-07	28.1	0.2	1.3e-06	27.7	0.1	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.14	gi|449066525|ref|YP_007433607.1|	-	1.1e-06	28.1	0.2	1.6e-06	27.6	0.1	1.3	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_20	PF12840.2	gi|449066525|ref|YP_007433607.1|	-	1.7e-05	24.5	0.2	2.7e-05	23.8	0.1	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_27	PF13463.1	gi|449066525|ref|YP_007433607.1|	-	3.8e-05	23.9	0.0	5.2e-05	23.4	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_9	PF08221.6	gi|449066525|ref|YP_007433607.1|	-	0.00061	19.6	0.0	0.001	18.9	0.0	1.3	1	0	0	1	1	1	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
DUF1495	PF07381.6	gi|449066525|ref|YP_007433607.1|	-	0.00064	19.3	0.2	0.01	15.5	0.1	2.1	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain	(DUF1495)
HxlR	PF01638.12	gi|449066525|ref|YP_007433607.1|	-	0.00097	18.7	0.2	0.004	16.7	0.1	1.8	1	1	1	2	2	2	1	HxlR-like	helix-turn-helix
RPA_C	PF08784.6	gi|449066525|ref|YP_007433607.1|	-	0.0013	19.0	0.0	0.0019	18.5	0.0	1.2	1	0	0	1	1	1	1	Replication	protein	A	C	terminal
DUF387	PF04079.11	gi|449066525|ref|YP_007433607.1|	-	0.0026	17.1	0.2	0.0026	17.1	0.1	1.1	1	0	0	1	1	1	1	Putative	transcriptional	regulators	(Ypuh-like)
MarR	PF01047.17	gi|449066525|ref|YP_007433607.1|	-	0.0042	16.7	0.1	0.006	16.2	0.1	1.2	1	0	0	1	1	1	1	MarR	family
HTH_IclR	PF09339.5	gi|449066525|ref|YP_007433607.1|	-	0.0055	16.2	0.0	0.0077	15.7	0.0	1.2	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
Penicillinase_R	PF03965.11	gi|449066525|ref|YP_007433607.1|	-	0.0063	16.5	0.0	0.0074	16.3	0.0	1.2	1	0	0	1	1	1	1	Penicillinase	repressor
DUF2250	PF10007.4	gi|449066525|ref|YP_007433607.1|	-	0.0081	16.0	0.0	0.012	15.5	0.0	1.3	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
B-block_TFIIIC	PF04182.7	gi|449066525|ref|YP_007433607.1|	-	0.017	14.9	0.0	0.027	14.3	0.0	1.4	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
DUF4393	PF14337.1	gi|449066525|ref|YP_007433607.1|	-	0.018	14.4	0.0	0.019	14.4	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4393)
TFIIE_alpha	PF02002.12	gi|449066525|ref|YP_007433607.1|	-	0.019	14.4	0.2	0.023	14.2	0.2	1.4	1	1	0	1	1	1	0	TFIIE	alpha	subunit
PadR	PF03551.9	gi|449066525|ref|YP_007433607.1|	-	0.019	14.7	0.0	0.026	14.2	0.0	1.3	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
HTH_45	PF14947.1	gi|449066525|ref|YP_007433607.1|	-	0.054	13.3	0.0	0.088	12.6	0.0	1.4	1	1	0	1	1	1	0	Winged	helix-turn-helix
DUF977	PF06163.6	gi|449066525|ref|YP_007433607.1|	-	0.062	13.0	0.1	0.071	12.8	0.1	1.1	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF977)
Sdh_cyt	PF01127.17	gi|449066526|ref|YP_007433608.1|	-	0.44	10.3	4.3	0.55	10.0	3.0	1.2	1	0	0	1	1	1	0	Succinate	dehydrogenase/Fumarate	reductase	transmembrane	subunit
DUF808	PF05661.7	gi|449066526|ref|YP_007433608.1|	-	0.49	9.1	3.0	0.45	9.2	1.6	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF808)
DUF3829	PF12889.2	gi|449066531|ref|YP_007433613.1|	-	0.00047	19.4	1.7	0.00079	18.6	1.2	1.5	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF3829)
phiKZ_IP	PF12699.2	gi|449066531|ref|YP_007433613.1|	-	0.046	12.6	0.3	0.68	8.7	0.0	2.2	2	0	0	2	2	2	0	phiKZ-like	phage	internal	head	proteins
MSP7_C	PF12948.2	gi|449066531|ref|YP_007433613.1|	-	0.21	11.8	4.1	0.43	10.8	0.2	2.8	2	1	1	3	3	3	0	MSP7-like	protein	C-terminal	domain
PIN	PF01850.16	gi|449066532|ref|YP_007433614.1|	-	0.0046	17.2	1.7	0.0086	16.4	0.1	2.3	2	2	0	2	2	2	1	PIN	domain
DnaI_N	PF07319.6	gi|449066532|ref|YP_007433614.1|	-	0.02	15.1	1.1	0.29	11.4	0.0	2.8	3	0	0	3	3	3	0	Primosomal	protein	DnaI	N-terminus
DUF2256	PF10013.4	gi|449066533|ref|YP_007433615.1|	-	0.065	12.9	0.6	0.065	12.9	0.4	1.4	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2256)
DUF3463	PF11946.3	gi|449066533|ref|YP_007433615.1|	-	0.26	10.8	2.0	0.3	10.6	1.4	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3463)
DUF4051	PF13260.1	gi|449066534|ref|YP_007433616.1|	-	0.072	12.4	2.0	2.2	7.6	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4051)
HrcA_DNA-bdg	PF03444.10	gi|449066535|ref|YP_007433617.1|	-	0.0028	17.0	3.4	0.029	13.8	0.1	2.9	3	0	0	3	3	3	1	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
Globin	PF00042.17	gi|449066535|ref|YP_007433617.1|	-	0.04	14.2	0.6	5.2	7.4	0.0	2.5	2	0	0	2	2	2	0	Globin
BLOC1_2	PF10046.4	gi|449066535|ref|YP_007433617.1|	-	0.16	12.1	5.8	0.11	12.6	1.9	2.3	2	0	0	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
CLTH	PF10607.4	gi|449066535|ref|YP_007433617.1|	-	0.28	10.8	8.6	0.11	12.2	2.7	2.2	1	1	0	2	2	2	0	CTLH/CRA	C-terminal	to	LisH	motif	domain
DUF2408	PF10303.4	gi|449066535|ref|YP_007433617.1|	-	0.59	10.2	5.6	4.8	7.3	1.4	2.5	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2408)
DUF643	PF04867.7	gi|449066535|ref|YP_007433617.1|	-	1.3	9.4	7.7	9.9	6.6	0.2	3.5	2	2	1	3	3	3	0	Protein	of	unknown	function	(DUF643)
Apo-CII	PF05355.6	gi|449066538|ref|YP_007433620.1|	-	0.83	9.5	3.3	1.6	8.6	0.0	2.9	3	1	0	3	3	3	0	Apolipoprotein	C-II
DUF4065	PF13274.1	gi|449066539|ref|YP_007433621.1|	-	0.012	16.3	0.1	0.024	15.3	0.1	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4065)
DUF1495	PF07381.6	gi|449066539|ref|YP_007433621.1|	-	0.038	13.6	0.5	11	5.7	0.1	2.6	2	1	0	2	2	2	0	Winged	helix	DNA-binding	domain	(DUF1495)
OSCP	PF00213.13	gi|449066539|ref|YP_007433621.1|	-	0.084	12.7	0.2	1.2	8.9	0.0	2.0	2	0	0	2	2	2	0	ATP	synthase	delta	(OSCP)	subunit
PNPase	PF03726.9	gi|449066539|ref|YP_007433621.1|	-	1.8	8.8	4.7	21	5.4	0.1	3.0	2	1	1	3	3	3	0	Polyribonucleotide	nucleotidyltransferase,	RNA	binding	domain
Nnf1	PF03980.9	gi|449066540|ref|YP_007433622.1|	-	0.069	13.1	1.7	0.078	12.9	1.2	1.2	1	0	0	1	1	1	0	Nnf1
HTH_OrfB_IS605	PF12323.3	gi|449066541|ref|YP_007433623.1|	-	0.0037	16.5	0.0	0.0048	16.1	0.0	1.1	1	0	0	1	1	1	1	Helix-turn-helix	domain
OrfB_IS605	PF01385.14	gi|449066542|ref|YP_007433624.1|	-	2.6e-57	193.8	2.1	4.6e-57	193.0	0.5	1.8	2	0	0	2	2	2	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.6	gi|449066542|ref|YP_007433624.1|	-	3.9e-06	26.4	0.0	7.6e-06	25.4	0.0	1.5	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
TBCA	PF02970.11	gi|449066542|ref|YP_007433624.1|	-	0.0049	16.9	0.6	0.011	15.7	0.4	1.5	1	0	0	1	1	1	1	Tubulin	binding	cofactor	A
NAM	PF02365.10	gi|449066542|ref|YP_007433624.1|	-	0.076	13.2	1.0	0.73	10.0	0.1	2.5	2	0	0	2	2	2	0	No	apical	meristem	(NAM)	protein
Ribosomal_S13_N	PF08069.7	gi|449066544|ref|YP_007433626.1|	-	0.15	11.8	0.0	0.28	11.0	0.0	1.4	1	0	0	1	1	1	0	Ribosomal	S13/S15	N-terminal	domain
PepSY_TM	PF03929.11	gi|449066545|ref|YP_007433627.1|	-	0.015	15.6	1.0	0.79	10.2	0.2	2.2	2	0	0	2	2	2	0	PepSY-associated	TM	helix
Tmemb_14	PF03647.8	gi|449066545|ref|YP_007433627.1|	-	0.088	13.2	4.0	2.7	8.4	0.1	2.2	2	0	0	2	2	2	0	Transmembrane	proteins	14C
DUF3185	PF11381.3	gi|449066545|ref|YP_007433627.1|	-	0.16	11.7	2.9	0.23	11.2	2.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3185)
FtsQ	PF03799.10	gi|449066547|ref|YP_007433629.1|	-	0.016	15.3	0.0	0.039	14.1	0.0	1.6	1	1	0	1	1	1	0	Cell	division	protein	FtsQ
SNAP	PF14938.1	gi|449066552|ref|YP_007433634.1|	-	0.072	12.2	2.0	0.081	12.0	0.2	1.7	2	0	0	2	2	2	0	Soluble	NSF	attachment	protein,	SNAP
Phage_integrase	PF00589.17	gi|449066553|ref|YP_007433635.1|	-	0.0026	17.4	0.0	0.91	9.1	0.0	2.6	3	0	0	3	3	3	2	Phage	integrase	family
Phage_int_SAM_4	PF13495.1	gi|449066553|ref|YP_007433635.1|	-	0.043	14.1	1.3	0.63	10.4	0.0	3.0	3	1	1	4	4	4	0	Phage	integrase,	N-terminal	SAM-like	domain
Arch_ATPase	PF01637.13	gi|449066555|ref|YP_007433637.1|	-	8.2e-34	117.3	3.4	8.2e-34	117.3	2.3	2.5	2	2	0	2	2	2	1	Archaeal	ATPase
DUF234	PF03008.9	gi|449066555|ref|YP_007433637.1|	-	3.3e-21	75.2	1.7	3.3e-21	75.2	1.2	2.2	2	0	0	2	2	2	1	Archaea	bacterial	proteins	of	unknown	function
AAA_14	PF13173.1	gi|449066555|ref|YP_007433637.1|	-	3.3e-10	39.9	1.3	8e-10	38.7	0.2	2.2	2	1	0	2	2	2	1	AAA	domain
HTH_24	PF13412.1	gi|449066555|ref|YP_007433637.1|	-	1.2e-05	24.5	0.1	0.0002	20.6	0.0	2.9	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
AAA_16	PF13191.1	gi|449066555|ref|YP_007433637.1|	-	3.3e-05	23.9	0.0	0.0087	16.0	0.0	2.5	1	1	1	2	2	2	1	AAA	ATPase	domain
HTH_5	PF01022.15	gi|449066555|ref|YP_007433637.1|	-	6.5e-05	22.5	0.0	0.00017	21.2	0.0	1.7	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
AAA_22	PF13401.1	gi|449066555|ref|YP_007433637.1|	-	8.2e-05	22.7	0.0	0.00021	21.4	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
MarR	PF01047.17	gi|449066555|ref|YP_007433637.1|	-	0.00015	21.3	0.0	0.00033	20.2	0.0	1.5	1	0	0	1	1	1	1	MarR	family
HTH_45	PF14947.1	gi|449066555|ref|YP_007433637.1|	-	0.00027	20.7	1.5	0.0014	18.4	0.0	2.9	3	1	0	3	3	3	1	Winged	helix-turn-helix
TrmB	PF01978.14	gi|449066555|ref|YP_007433637.1|	-	0.00084	18.9	0.2	0.0024	17.5	0.1	1.7	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|449066555|ref|YP_007433637.1|	-	0.0025	17.4	0.0	0.0053	16.3	0.0	1.5	1	0	0	1	1	1	1	MarR	family
Sulfolobus_pRN	PF05584.6	gi|449066555|ref|YP_007433637.1|	-	0.019	14.9	0.1	0.071	13.0	0.0	2.0	2	0	0	2	2	2	0	Sulfolobus	plasmid	regulatory	protein
AAA	PF00004.24	gi|449066555|ref|YP_007433637.1|	-	0.019	15.1	0.0	0.055	13.6	0.0	1.8	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
HTH_34	PF13601.1	gi|449066555|ref|YP_007433637.1|	-	0.059	13.4	0.1	0.24	11.4	0.0	2.0	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
DUF4143	PF13635.1	gi|449066555|ref|YP_007433637.1|	-	0.064	13.4	0.3	0.19	11.9	0.2	1.9	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4143)
HTH_IclR	PF09339.5	gi|449066555|ref|YP_007433637.1|	-	0.16	11.5	0.0	0.29	10.7	0.0	1.4	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_34	PF13601.1	gi|449066557|ref|YP_007433639.1|	-	4.2e-09	36.3	0.0	5.3e-09	35.9	0.0	1.1	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_5	PF01022.15	gi|449066557|ref|YP_007433639.1|	-	5.2e-06	26.0	0.1	0.00044	19.8	0.0	2.3	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
PadR	PF03551.9	gi|449066557|ref|YP_007433639.1|	-	0.00012	21.7	0.1	0.00017	21.2	0.0	1.2	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_20	PF12840.2	gi|449066557|ref|YP_007433639.1|	-	0.0039	16.9	0.0	0.013	15.2	0.0	1.9	2	0	0	2	2	2	1	Helix-turn-helix	domain
Sulfolobus_pRN	PF05584.6	gi|449066557|ref|YP_007433639.1|	-	0.087	12.8	0.0	0.12	12.3	0.0	1.4	1	0	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
Nitroreductase	PF00881.19	gi|449066559|ref|YP_007433641.1|	-	5.6e-20	71.7	0.0	7.9e-20	71.3	0.0	1.2	1	0	0	1	1	1	1	Nitroreductase	family
YcaO	PF02624.11	gi|449066560|ref|YP_007433642.1|	-	3.9e-43	148.2	0.0	4.5e-43	148.0	0.0	1.0	1	0	0	1	1	1	1	YcaO-like	family
IF-2B	PF01008.12	gi|449066561|ref|YP_007433643.1|	-	0.011	14.7	0.0	0.014	14.3	0.0	1.2	1	0	0	1	1	1	0	Initiation	factor	2	subunit	family
Peptidase_M50	PF02163.17	gi|449066563|ref|YP_007433645.1|	-	1.9	7.3	7.0	1.8	7.5	3.9	1.6	1	1	0	1	1	1	0	Peptidase	family	M50
ABC_tran	PF00005.22	gi|449066565|ref|YP_007433647.1|	-	5.7e-18	65.5	0.0	8.1e-18	65.0	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|449066565|ref|YP_007433647.1|	-	1.2e-12	48.3	1.5	4.2e-06	26.9	1.4	2.1	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|449066565|ref|YP_007433647.1|	-	9.5e-10	38.0	0.1	0.00013	21.3	0.0	2.1	1	1	1	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|449066565|ref|YP_007433647.1|	-	3.6e-06	27.4	1.1	5.1e-06	26.9	0.8	1.3	1	1	0	1	1	1	1	AAA	domain
AAA_13	PF13166.1	gi|449066565|ref|YP_007433647.1|	-	8.3e-06	24.5	0.4	0.00045	18.8	0.2	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_29	PF13555.1	gi|449066565|ref|YP_007433647.1|	-	0.00012	21.5	0.2	0.00021	20.7	0.1	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA	PF00004.24	gi|449066565|ref|YP_007433647.1|	-	0.00017	21.8	0.0	0.00025	21.2	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_15	PF13175.1	gi|449066565|ref|YP_007433647.1|	-	0.00022	20.4	0.1	0.002	17.2	0.2	2.0	1	1	1	2	2	2	1	AAA	ATPase	domain
SbcCD_C	PF13558.1	gi|449066565|ref|YP_007433647.1|	-	0.00079	19.2	0.0	0.0093	15.8	0.0	2.1	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_16	PF13191.1	gi|449066565|ref|YP_007433647.1|	-	0.0016	18.4	0.1	0.0021	18.0	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
Arch_ATPase	PF01637.13	gi|449066565|ref|YP_007433647.1|	-	0.0024	17.6	0.9	0.0044	16.7	0.6	1.7	1	1	0	1	1	1	1	Archaeal	ATPase
Zeta_toxin	PF06414.7	gi|449066565|ref|YP_007433647.1|	-	0.0029	16.7	0.1	0.0061	15.6	0.0	1.5	1	1	0	1	1	1	1	Zeta	toxin
UPF0079	PF02367.12	gi|449066565|ref|YP_007433647.1|	-	0.0036	16.9	0.1	0.021	14.4	0.1	2.0	2	0	0	2	2	2	1	Uncharacterised	P-loop	hydrolase	UPF0079
DUF258	PF03193.11	gi|449066565|ref|YP_007433647.1|	-	0.0041	16.3	0.2	0.0065	15.6	0.1	1.4	2	0	0	2	2	2	1	Protein	of	unknown	function,	DUF258
AAA_19	PF13245.1	gi|449066565|ref|YP_007433647.1|	-	0.016	14.9	0.1	0.028	14.1	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_25	PF13481.1	gi|449066565|ref|YP_007433647.1|	-	0.016	14.5	0.1	0.028	13.8	0.1	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_17	PF13207.1	gi|449066565|ref|YP_007433647.1|	-	0.022	15.5	0.3	0.037	14.8	0.2	1.6	1	1	0	1	1	1	0	AAA	domain
AAA_22	PF13401.1	gi|449066565|ref|YP_007433647.1|	-	0.035	14.2	0.3	0.047	13.8	0.2	1.6	1	1	0	1	1	1	0	AAA	domain
AAA_33	PF13671.1	gi|449066565|ref|YP_007433647.1|	-	0.038	13.8	0.1	0.18	11.6	0.1	2.1	1	1	0	1	1	1	0	AAA	domain
DUF3584	PF12128.3	gi|449066565|ref|YP_007433647.1|	-	0.038	11.3	0.3	0.05	10.9	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
Mg_chelatase	PF01078.16	gi|449066565|ref|YP_007433647.1|	-	0.039	13.0	0.0	0.065	12.3	0.0	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
T2SE	PF00437.15	gi|449066565|ref|YP_007433647.1|	-	0.042	12.7	0.6	0.071	12.0	0.4	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
DUF815	PF05673.8	gi|449066565|ref|YP_007433647.1|	-	0.047	12.6	0.3	0.15	11.0	0.1	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF815)
AAA_24	PF13479.1	gi|449066565|ref|YP_007433647.1|	-	0.048	13.2	0.1	0.082	12.4	0.1	1.3	1	0	0	1	1	1	0	AAA	domain
DUF2070	PF09843.4	gi|449066565|ref|YP_007433647.1|	-	0.049	13.1	0.0	0.084	12.3	0.0	1.3	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
AAA_5	PF07728.9	gi|449066565|ref|YP_007433647.1|	-	0.052	13.2	0.1	0.099	12.3	0.0	1.7	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_18	PF13238.1	gi|449066565|ref|YP_007433647.1|	-	0.059	13.6	0.1	0.13	12.5	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
NACHT	PF05729.7	gi|449066565|ref|YP_007433647.1|	-	0.069	12.8	0.1	0.12	11.9	0.1	1.4	1	0	0	1	1	1	0	NACHT	domain
NTPase_1	PF03266.10	gi|449066565|ref|YP_007433647.1|	-	0.076	12.7	0.6	1.2	8.7	0.0	2.1	2	0	0	2	2	2	0	NTPase
AAA_28	PF13521.1	gi|449066565|ref|YP_007433647.1|	-	0.095	12.6	0.1	0.18	11.7	0.1	1.4	1	0	0	1	1	1	0	AAA	domain
Adeno_IVa2	PF02456.10	gi|449066565|ref|YP_007433647.1|	-	0.12	11.0	0.1	0.17	10.5	0.1	1.2	1	0	0	1	1	1	0	Adenovirus	IVa2	protein
MMR_HSR1	PF01926.18	gi|449066565|ref|YP_007433647.1|	-	0.13	12.2	0.3	0.18	11.7	0.2	1.4	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
MFS_1	PF07690.11	gi|449066566|ref|YP_007433648.1|	-	2e-05	23.4	21.7	2.7e-05	23.0	15.0	1.1	1	0	0	1	1	1	1	Major	Facilitator	Superfamily
LacY_symp	PF01306.14	gi|449066568|ref|YP_007433650.1|	-	0.0035	15.9	1.1	0.0036	15.9	0.8	1.0	1	0	0	1	1	1	1	LacY	proton/sugar	symporter
MFS_1	PF07690.11	gi|449066568|ref|YP_007433650.1|	-	0.0066	15.2	3.7	0.0068	15.1	2.6	1.0	1	0	0	1	1	1	1	Major	Facilitator	Superfamily
SSV1_ORF_D-335	PF07935.6	gi|449066570|ref|YP_007433652.1|	-	3.9e-29	100.2	1.3	4.4e-29	100.0	0.9	1.0	1	0	0	1	1	1	1	ORF	D-335-like	protein
IF-2B	PF01008.12	gi|449066572|ref|YP_007433654.1|	-	8.3e-75	251.3	0.1	1e-74	251.1	0.1	1.1	1	0	0	1	1	1	1	Initiation	factor	2	subunit	family
DUF4342	PF14242.1	gi|449066572|ref|YP_007433654.1|	-	0.016	14.9	1.0	1.7	8.4	0.0	2.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4342)
SSV1_ORF_D-335	PF07935.6	gi|449066573|ref|YP_007433655.1|	-	2.2e-09	36.9	1.7	2.3e-09	36.8	1.2	1.0	1	0	0	1	1	1	1	ORF	D-335-like	protein
DHH	PF01368.15	gi|449066574|ref|YP_007433656.1|	-	6.9e-08	32.2	0.1	1.1e-07	31.6	0.0	1.3	1	0	0	1	1	1	1	DHH	family
DHHA1	PF02272.14	gi|449066574|ref|YP_007433656.1|	-	9.7e-07	28.3	0.1	2.6e-06	27.0	0.1	1.7	1	0	0	1	1	1	1	DHHA1	domain
CPSase_sm_chain	PF00988.17	gi|449066574|ref|YP_007433656.1|	-	0.067	12.6	0.0	0.21	11.1	0.0	1.8	1	1	1	2	2	2	0	Carbamoyl-phosphate	synthase	small	chain,	CPSase	domain
Isochorismatase	PF00857.15	gi|449066575|ref|YP_007433657.1|	-	2.6e-40	138.2	0.0	3.1e-40	137.9	0.0	1.0	1	0	0	1	1	1	1	Isochorismatase	family
Endonuclease_5	PF04493.9	gi|449066576|ref|YP_007433658.1|	-	1.6e-42	145.2	0.4	2e-42	144.9	0.3	1.1	1	0	0	1	1	1	1	Endonuclease	V
NurA	PF09376.5	gi|449066576|ref|YP_007433658.1|	-	0.14	11.6	1.6	1	8.8	0.0	2.6	1	1	0	3	3	3	0	NurA	domain
Y_phosphatase	PF00102.22	gi|449066577|ref|YP_007433659.1|	-	1.4e-10	40.9	0.0	1.6e-10	40.7	0.0	1.1	1	0	0	1	1	1	1	Protein-tyrosine	phosphatase
DSPc	PF00782.15	gi|449066577|ref|YP_007433659.1|	-	4.8e-10	39.1	0.0	6.3e-10	38.7	0.0	1.3	1	0	0	1	1	1	1	Dual	specificity	phosphatase,	catalytic	domain
PTPlike_phytase	PF14566.1	gi|449066577|ref|YP_007433659.1|	-	6.5e-05	23.0	0.0	0.00013	22.0	0.0	1.6	1	1	0	1	1	1	1	Inositol	hexakisphosphate
CDKN3	PF05706.7	gi|449066577|ref|YP_007433659.1|	-	0.00023	20.6	0.0	0.00028	20.3	0.0	1.2	1	0	0	1	1	1	1	Cyclin-dependent	kinase	inhibitor	3	(CDKN3)
Y_phosphatase3	PF13350.1	gi|449066577|ref|YP_007433659.1|	-	0.021	15.1	0.0	0.026	14.7	0.0	1.2	1	0	0	1	1	1	0	Tyrosine	phosphatase	family
KaiC	PF06745.8	gi|449066578|ref|YP_007433660.1|	-	3.2e-57	193.2	0.2	3.7e-57	193.0	0.1	1.1	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.1	gi|449066578|ref|YP_007433660.1|	-	9.7e-13	47.9	0.0	1.4e-12	47.4	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
GvpD	PF07088.6	gi|449066578|ref|YP_007433660.1|	-	1.1e-07	30.5	0.1	3e-07	29.1	0.1	1.8	1	1	0	1	1	1	1	GvpD	gas	vesicle	protein
RecA	PF00154.16	gi|449066578|ref|YP_007433660.1|	-	5.2e-07	29.0	0.0	1e-06	28.0	0.0	1.4	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
Rad51	PF08423.6	gi|449066578|ref|YP_007433660.1|	-	1.2e-06	27.6	0.0	2.2e-06	26.7	0.0	1.4	1	1	0	1	1	1	1	Rad51
IstB_IS21	PF01695.12	gi|449066578|ref|YP_007433660.1|	-	0.00014	21.3	0.0	0.0003	20.2	0.0	1.6	1	1	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_19	PF13245.1	gi|449066578|ref|YP_007433660.1|	-	0.0002	21.0	0.0	0.00049	19.8	0.0	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_22	PF13401.1	gi|449066578|ref|YP_007433660.1|	-	0.00024	21.2	0.0	0.00053	20.1	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
DnaB_C	PF03796.10	gi|449066578|ref|YP_007433660.1|	-	0.00061	18.7	0.0	0.0012	17.8	0.0	1.5	1	0	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
AAA_14	PF13173.1	gi|449066578|ref|YP_007433660.1|	-	0.00067	19.5	0.1	0.015	15.1	0.0	2.3	1	1	0	1	1	1	1	AAA	domain
AAA_35	PF14516.1	gi|449066578|ref|YP_007433660.1|	-	0.0023	16.6	0.0	0.0029	16.2	0.0	1.1	1	0	0	1	1	1	1	AAA-like	domain
MEDS	PF14417.1	gi|449066578|ref|YP_007433660.1|	-	0.017	14.2	0.0	0.026	13.5	0.0	1.3	1	0	0	1	1	1	0	MEDS:	MEthanogen/methylotroph,	DcmR	Sensory	domain
PAXNEB	PF05625.6	gi|449066578|ref|YP_007433660.1|	-	0.018	13.9	0.1	0.032	13.0	0.1	1.4	1	1	0	1	1	1	0	PAXNEB	protein
DUF2075	PF09848.4	gi|449066578|ref|YP_007433660.1|	-	0.02	13.8	0.0	0.03	13.3	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_28	PF13521.1	gi|449066578|ref|YP_007433660.1|	-	0.044	13.7	0.0	0.078	12.9	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
DEAD	PF00270.24	gi|449066578|ref|YP_007433660.1|	-	0.045	13.2	0.0	0.068	12.6	0.0	1.3	1	0	0	1	1	1	0	DEAD/DEAH	box	helicase
AAA_10	PF12846.2	gi|449066578|ref|YP_007433660.1|	-	0.074	12.4	0.0	0.092	12.1	0.0	1.3	1	0	0	1	1	1	0	AAA-like	domain
AAA	PF00004.24	gi|449066578|ref|YP_007433660.1|	-	0.09	12.9	0.2	0.26	11.4	0.1	1.9	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
RNA_helicase	PF00910.17	gi|449066578|ref|YP_007433660.1|	-	0.09	12.9	0.0	0.42	10.8	0.0	2.0	2	1	0	2	2	2	0	RNA	helicase
NACHT	PF05729.7	gi|449066578|ref|YP_007433660.1|	-	0.095	12.3	0.6	0.32	10.6	0.4	2.1	1	1	0	1	1	1	0	NACHT	domain
NTPase_1	PF03266.10	gi|449066578|ref|YP_007433660.1|	-	0.11	12.1	0.3	0.24	11.0	0.1	1.9	2	1	0	2	2	2	0	NTPase
Sigma54_activat	PF00158.21	gi|449066578|ref|YP_007433660.1|	-	0.11	11.9	0.0	0.2	11.1	0.0	1.3	1	0	0	1	1	1	0	Sigma-54	interaction	domain
Sigma54_activ_2	PF14532.1	gi|449066578|ref|YP_007433660.1|	-	0.11	12.5	0.0	0.21	11.6	0.0	1.4	1	0	0	1	1	1	0	Sigma-54	interaction	domain
AAA_24	PF13479.1	gi|449066578|ref|YP_007433660.1|	-	0.12	11.9	0.7	0.44	10.1	0.1	2.2	3	1	0	3	3	3	0	AAA	domain
AAA_17	PF13207.1	gi|449066578|ref|YP_007433660.1|	-	0.23	12.2	2.3	1.2	10.0	1.6	2.3	1	1	0	1	1	1	0	AAA	domain
QRPTase_C	PF01729.14	gi|449066579|ref|YP_007433661.1|	-	3.2e-66	222.0	0.5	4e-66	221.6	0.3	1.1	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
QRPTase_N	PF02749.11	gi|449066579|ref|YP_007433661.1|	-	2.5e-17	62.4	0.0	7.1e-17	61.0	0.0	1.8	2	0	0	2	2	2	1	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
TMP-TENI	PF02581.12	gi|449066579|ref|YP_007433661.1|	-	0.011	14.8	0.1	0.21	10.6	0.1	2.3	1	1	0	1	1	1	0	Thiamine	monophosphate	synthase/TENI
NanE	PF04131.9	gi|449066579|ref|YP_007433661.1|	-	0.015	14.2	0.6	0.042	12.8	0.4	1.6	1	1	0	1	1	1	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
Methyltransf_30	PF05430.6	gi|449066579|ref|YP_007433661.1|	-	0.02	14.5	0.0	0.041	13.5	0.0	1.5	1	0	0	1	1	1	0	S-adenosyl-L-methionine-dependent	methyltransferase
PcrB	PF01884.12	gi|449066579|ref|YP_007433661.1|	-	0.023	13.9	1.1	0.09	12.0	0.0	2.1	1	1	1	2	2	2	0	PcrB	family
Methyltransf_31	PF13847.1	gi|449066579|ref|YP_007433661.1|	-	0.038	13.5	0.3	0.08	12.5	0.1	1.7	2	0	0	2	2	2	0	Methyltransferase	domain
RVT_thumb	PF06817.9	gi|449066579|ref|YP_007433661.1|	-	0.055	13.0	0.0	0.12	11.9	0.0	1.5	1	0	0	1	1	1	0	Reverse	transcriptase	thumb	domain
YbfN	PF13982.1	gi|449066579|ref|YP_007433661.1|	-	0.13	12.4	0.1	0.24	11.6	0.0	1.4	1	0	0	1	1	1	0	YbfN-like	lipoprotein
GATase	PF00117.23	gi|449066580|ref|YP_007433662.1|	-	1.6e-35	122.3	0.0	1.7e-35	122.1	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|449066580|ref|YP_007433662.1|	-	2.8e-10	39.9	0.1	1.2e-09	37.9	0.0	1.9	2	1	0	2	2	2	1	Peptidase	C26
SNO	PF01174.14	gi|449066580|ref|YP_007433662.1|	-	6.6e-06	25.8	0.1	0.029	13.9	0.0	2.1	2	0	0	2	2	2	2	SNO	glutamine	amidotransferase	family
HTS	PF04204.11	gi|449066580|ref|YP_007433662.1|	-	0.091	11.4	0.0	0.11	11.2	0.0	1.1	1	0	0	1	1	1	0	Homoserine	O-succinyltransferase
FAD_binding_2	PF00890.19	gi|449066581|ref|YP_007433663.1|	-	1.6e-74	251.2	0.0	2.2e-74	250.8	0.0	1.1	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox_2	PF07992.9	gi|449066581|ref|YP_007433663.1|	-	1.1e-11	44.9	0.2	3.3e-07	30.4	0.1	3.0	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Succ_DH_flav_C	PF02910.15	gi|449066581|ref|YP_007433663.1|	-	1e-08	35.1	0.1	1.1e-05	25.2	0.0	2.3	1	1	1	2	2	2	2	Fumarate	reductase	flavoprotein	C-term
DAO	PF01266.19	gi|449066581|ref|YP_007433663.1|	-	3.2e-07	29.5	0.1	6.3e-05	22.0	0.3	2.2	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
GIDA	PF01134.17	gi|449066581|ref|YP_007433663.1|	-	9.4e-05	21.4	0.3	0.1	11.4	0.2	2.2	2	0	0	2	2	2	2	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.9	gi|449066581|ref|YP_007433663.1|	-	0.0012	17.4	0.5	0.024	13.0	0.1	2.7	2	1	0	2	2	2	1	HI0933-like	protein
NAD_binding_8	PF13450.1	gi|449066581|ref|YP_007433663.1|	-	0.0021	18.0	0.3	0.0064	16.5	0.2	1.8	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
ApbA	PF02558.11	gi|449066581|ref|YP_007433663.1|	-	0.042	13.3	0.2	0.087	12.2	0.1	1.6	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
FAD_binding_3	PF01494.14	gi|449066581|ref|YP_007433663.1|	-	0.055	12.5	0.9	0.098	11.6	0.6	1.4	1	0	0	1	1	1	0	FAD	binding	domain
DUF481	PF04338.7	gi|449066581|ref|YP_007433663.1|	-	0.076	12.7	0.0	0.13	11.9	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF481
NUDIX	PF00293.23	gi|449066582|ref|YP_007433664.1|	-	3.1e-15	55.9	0.0	3.9e-15	55.6	0.0	1.1	1	0	0	1	1	1	1	NUDIX	domain
TIP49	PF06068.8	gi|449066583|ref|YP_007433665.1|	-	5.2e-157	522.6	7.1	6.1e-157	522.4	4.9	1.0	1	0	0	1	1	1	1	TIP49	C-terminus
AAA	PF00004.24	gi|449066583|ref|YP_007433665.1|	-	7.8e-11	42.2	3.5	1.6e-08	34.8	0.1	2.8	3	0	0	3	3	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.7	gi|449066583|ref|YP_007433665.1|	-	9e-09	34.7	3.9	6.1e-07	28.7	0.1	3.4	2	2	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_22	PF13401.1	gi|449066583|ref|YP_007433665.1|	-	6.1e-08	32.8	0.8	0.004	17.2	0.0	2.4	1	1	0	2	2	2	2	AAA	domain
AAA_16	PF13191.1	gi|449066583|ref|YP_007433665.1|	-	1.1e-07	32.0	0.2	0.00039	20.4	0.0	2.3	2	0	0	2	2	2	2	AAA	ATPase	domain
DNA_pol3_delta2	PF13177.1	gi|449066583|ref|YP_007433665.1|	-	3.1e-05	23.6	0.1	0.022	14.4	0.0	2.9	2	1	0	2	2	2	1	DNA	polymerase	III,	delta	subunit
AAA_17	PF13207.1	gi|449066583|ref|YP_007433665.1|	-	4.6e-05	24.2	0.4	0.00022	22.0	0.0	2.4	2	1	0	2	2	2	1	AAA	domain
AAA_25	PF13481.1	gi|449066583|ref|YP_007433665.1|	-	6.2e-05	22.4	0.1	0.00052	19.4	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_5	PF07728.9	gi|449066583|ref|YP_007433665.1|	-	6.3e-05	22.7	0.2	0.0023	17.6	0.0	2.5	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
Mg_chelatase	PF01078.16	gi|449066583|ref|YP_007433665.1|	-	0.00012	21.3	0.4	0.00086	18.5	0.1	2.1	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_33	PF13671.1	gi|449066583|ref|YP_007433665.1|	-	0.00019	21.3	0.0	0.00037	20.3	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.12	gi|449066583|ref|YP_007433665.1|	-	0.00028	20.3	0.0	0.00059	19.2	0.0	1.5	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_18	PF13238.1	gi|449066583|ref|YP_007433665.1|	-	0.0004	20.6	0.1	0.0013	19.0	0.0	2.0	2	0	0	2	2	1	1	AAA	domain
AAA_19	PF13245.1	gi|449066583|ref|YP_007433665.1|	-	0.00041	20.0	0.2	0.0011	18.6	0.1	1.8	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_2	PF07724.9	gi|449066583|ref|YP_007433665.1|	-	0.00094	19.1	0.2	0.0035	17.2	0.0	2.0	2	0	0	2	2	1	1	AAA	domain	(Cdc48	subfamily)
DnaB_C	PF03796.10	gi|449066583|ref|YP_007433665.1|	-	0.0017	17.3	0.1	0.0051	15.7	0.0	1.8	2	0	0	2	2	2	1	DnaB-like	helicase	C	terminal	domain
Sigma54_activat	PF00158.21	gi|449066583|ref|YP_007433665.1|	-	0.0025	17.3	0.1	0.022	14.2	0.0	2.2	2	0	0	2	2	2	1	Sigma-54	interaction	domain
DUF2075	PF09848.4	gi|449066583|ref|YP_007433665.1|	-	0.0036	16.3	0.0	0.0065	15.4	0.0	1.4	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
RNA_helicase	PF00910.17	gi|449066583|ref|YP_007433665.1|	-	0.0061	16.7	0.0	0.012	15.7	0.0	1.5	1	0	0	1	1	1	1	RNA	helicase
PhoH	PF02562.11	gi|449066583|ref|YP_007433665.1|	-	0.0074	15.5	0.1	0.015	14.5	0.1	1.5	1	0	0	1	1	1	1	PhoH-like	protein
AAA_14	PF13173.1	gi|449066583|ref|YP_007433665.1|	-	0.0079	16.0	0.1	0.84	9.5	0.0	3.1	3	0	0	3	3	3	1	AAA	domain
Zeta_toxin	PF06414.7	gi|449066583|ref|YP_007433665.1|	-	0.009	15.1	0.1	0.017	14.2	0.1	1.4	1	0	0	1	1	1	1	Zeta	toxin
ABC_tran	PF00005.22	gi|449066583|ref|YP_007433665.1|	-	0.014	15.6	0.0	0.036	14.3	0.0	1.7	1	0	0	1	1	1	0	ABC	transporter
AAA_28	PF13521.1	gi|449066583|ref|YP_007433665.1|	-	0.022	14.7	1.1	0.052	13.5	0.1	2.1	2	1	1	3	3	2	0	AAA	domain
NACHT	PF05729.7	gi|449066583|ref|YP_007433665.1|	-	0.027	14.1	0.0	0.055	13.1	0.0	1.6	1	0	0	1	1	1	0	NACHT	domain
T2SE	PF00437.15	gi|449066583|ref|YP_007433665.1|	-	0.028	13.3	0.4	0.071	12.0	0.2	1.6	1	1	1	2	2	2	0	Type	II/IV	secretion	system	protein
MMR_HSR1	PF01926.18	gi|449066583|ref|YP_007433665.1|	-	0.029	14.3	0.1	0.071	13.0	0.0	1.8	1	0	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_11	PF13086.1	gi|449066583|ref|YP_007433665.1|	-	0.036	13.6	0.0	0.071	12.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Parvo_NS1	PF01057.12	gi|449066583|ref|YP_007433665.1|	-	0.039	12.8	0.0	0.064	12.1	0.0	1.3	1	0	0	1	1	1	0	Parvovirus	non-structural	protein	NS1
AAA_30	PF13604.1	gi|449066583|ref|YP_007433665.1|	-	0.039	13.5	0.4	1.4	8.5	0.1	2.4	2	0	0	2	2	2	0	AAA	domain
ResIII	PF04851.10	gi|449066583|ref|YP_007433665.1|	-	0.063	13.1	0.6	0.28	10.9	0.1	2.2	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
PepSY	PF03413.14	gi|449066583|ref|YP_007433665.1|	-	0.22	12.2	3.8	6.4	7.5	0.0	3.4	3	0	0	3	3	3	0	Peptidase	propeptide	and	YPEB	domain
PfkB	PF00294.19	gi|449066584|ref|YP_007433666.1|	-	6e-45	153.6	0.0	2e-44	151.9	0.0	1.8	1	1	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Diphtheria_T	PF02764.9	gi|449066584|ref|YP_007433666.1|	-	0.088	12.5	0.2	1.1	8.9	0.0	2.4	2	1	0	2	2	2	0	Diphtheria	toxin,	T	domain
IMS	PF00817.15	gi|449066585|ref|YP_007433667.1|	-	4.4e-44	149.8	0.1	8.1e-44	149.0	0.1	1.4	1	0	0	1	1	1	1	impB/mucB/samB	family
IMS_HHH	PF11798.3	gi|449066585|ref|YP_007433667.1|	-	1e-09	37.8	0.0	3.3e-09	36.2	0.0	2.0	1	0	0	1	1	1	1	IMS	family	HHH	motif
HHH_5	PF14520.1	gi|449066585|ref|YP_007433667.1|	-	2.9e-06	27.3	0.1	7.3e-06	26.0	0.1	1.7	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
IMS_C	PF11799.3	gi|449066585|ref|YP_007433667.1|	-	0.00041	20.2	0.0	0.0023	17.8	0.0	2.2	3	0	0	3	3	3	1	impB/mucB/samB	family	C-terminal	domain
DUF1805	PF08827.6	gi|449066585|ref|YP_007433667.1|	-	0.0047	16.7	0.3	0.18	11.5	0.1	3.0	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF1805)
Cdd1	PF11731.3	gi|449066585|ref|YP_007433667.1|	-	0.012	15.4	0.0	0.025	14.4	0.0	1.5	1	0	0	1	1	1	0	Pathogenicity	locus
BAF	PF02961.9	gi|449066585|ref|YP_007433667.1|	-	0.028	14.7	0.0	0.076	13.3	0.0	1.7	1	0	0	1	1	1	0	Barrier	to	autointegration	factor
Erp_C	PF06780.6	gi|449066586|ref|YP_007433668.1|	-	0.23	11.3	3.0	1.1	9.1	0.3	2.3	1	1	1	2	2	2	0	Erp	protein	C-terminus
RTC	PF01137.16	gi|449066587|ref|YP_007433669.1|	-	1.1e-80	269.6	0.1	1.3e-80	269.4	0.1	1.0	1	0	0	1	1	1	1	RNA	3'-terminal	phosphate	cyclase
RTC_insert	PF05189.8	gi|449066587|ref|YP_007433669.1|	-	1.4e-24	86.0	0.2	2.4e-24	85.3	0.1	1.4	1	0	0	1	1	1	1	RNA	3'-terminal	phosphate	cyclase	(RTC),	insert	domain
ADH_N	PF08240.7	gi|449066588|ref|YP_007433670.1|	-	1.8e-26	92.0	0.7	2.9e-26	91.3	0.5	1.3	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|449066588|ref|YP_007433670.1|	-	2.9e-16	59.2	0.0	6.8e-16	57.9	0.0	1.6	2	0	0	2	2	2	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|449066588|ref|YP_007433670.1|	-	5.1e-12	46.8	0.0	8.5e-12	46.0	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
NAD_binding_7	PF13241.1	gi|449066588|ref|YP_007433670.1|	-	0.0019	18.3	0.0	0.003	17.7	0.0	1.4	1	0	0	1	1	1	1	Putative	NAD(P)-binding
ApbA	PF02558.11	gi|449066588|ref|YP_007433670.1|	-	0.021	14.2	0.0	0.038	13.4	0.0	1.4	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
AlaDh_PNT_C	PF01262.16	gi|449066588|ref|YP_007433670.1|	-	0.023	14.2	0.0	0.04	13.4	0.0	1.3	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
CPSase_L_chain	PF00289.17	gi|449066588|ref|YP_007433670.1|	-	0.045	13.8	0.0	0.087	12.9	0.0	1.5	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
Pyr_redox_3	PF13738.1	gi|449066588|ref|YP_007433670.1|	-	0.054	13.5	0.0	0.086	12.8	0.0	1.3	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
Gln-synt_C	PF00120.19	gi|449066589|ref|YP_007433671.1|	-	2e-50	171.3	0.0	2.5e-50	171.0	0.0	1.1	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.14	gi|449066589|ref|YP_007433671.1|	-	0.0067	15.9	0.0	0.12	11.9	0.0	2.8	2	1	0	2	2	2	1	Glutamine	synthetase,	beta-Grasp	domain
Met_10	PF02475.11	gi|449066590|ref|YP_007433672.1|	-	7.1e-49	166.1	0.0	9e-49	165.7	0.0	1.1	1	0	0	1	1	1	1	Met-10+	like-protein
Fibrillarin	PF01269.12	gi|449066590|ref|YP_007433672.1|	-	0.0082	15.0	0.0	0.013	14.4	0.0	1.3	1	0	0	1	1	1	1	Fibrillarin
PrmA	PF06325.8	gi|449066590|ref|YP_007433672.1|	-	0.027	13.6	0.0	0.039	13.0	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
S-AdoMet_synt_N	PF00438.15	gi|449066590|ref|YP_007433672.1|	-	0.054	13.7	0.1	0.41	10.9	0.0	2.1	2	0	0	2	2	2	0	S-adenosylmethionine	synthetase,	N-terminal	domain
Amidohydro_5	PF13594.1	gi|449066591|ref|YP_007433673.1|	-	0.00048	19.8	0.0	0.0023	17.6	0.0	2.0	2	0	0	2	2	2	1	Amidohydrolase
Amidohydro_1	PF01979.15	gi|449066591|ref|YP_007433673.1|	-	0.00056	19.6	0.0	0.98	9.0	0.0	2.2	2	0	0	2	2	2	2	Amidohydrolase	family
PTH2	PF01981.11	gi|449066591|ref|YP_007433673.1|	-	0.0027	17.3	0.0	0.0043	16.7	0.0	1.3	1	0	0	1	1	1	1	Peptidyl-tRNA	hydrolase	PTH2
Chal_sti_synt_N	PF00195.14	gi|449066591|ref|YP_007433673.1|	-	0.075	12.2	0.0	0.12	11.6	0.0	1.2	1	0	0	1	1	1	0	Chalcone	and	stilbene	synthases,	N-terminal	domain
D-aminoacyl_C	PF07908.7	gi|449066591|ref|YP_007433673.1|	-	0.14	11.4	0.2	0.27	10.5	0.2	1.4	1	0	0	1	1	1	0	D-aminoacylase,	C-terminal	region
Peptidase_M54	PF07998.6	gi|449066592|ref|YP_007433674.1|	-	8.6e-37	126.8	0.9	1.1e-36	126.4	0.6	1.1	1	0	0	1	1	1	1	Peptidase	family	M54
Reprolysin_2	PF13574.1	gi|449066592|ref|YP_007433674.1|	-	6.3e-05	23.1	0.0	7.6e-05	22.8	0.0	1.1	1	0	0	1	1	1	1	Metallo-peptidase	family	M12B	Reprolysin-like
Peptidase_M10	PF00413.19	gi|449066592|ref|YP_007433674.1|	-	9.1e-05	22.2	0.0	9.9e-05	22.1	0.0	1.2	1	0	0	1	1	1	1	Matrixin
Peptidase_M43	PF05572.8	gi|449066592|ref|YP_007433674.1|	-	0.00031	20.3	0.9	0.00041	19.9	0.2	1.5	2	0	0	2	2	2	1	Pregnancy-associated	plasma	protein-A
Reprolysin_3	PF13582.1	gi|449066592|ref|YP_007433674.1|	-	0.00044	20.7	0.0	0.00059	20.3	0.0	1.2	1	0	0	1	1	1	1	Metallo-peptidase	family	M12B	Reprolysin-like
Reprolysin_4	PF13583.1	gi|449066592|ref|YP_007433674.1|	-	0.0024	17.4	0.0	0.0035	16.9	0.0	1.2	1	0	0	1	1	1	1	Metallo-peptidase	family	M12B	Reprolysin-like
Reprolysin_5	PF13688.1	gi|449066592|ref|YP_007433674.1|	-	0.0033	17.3	0.1	0.0033	17.3	0.0	1.3	1	1	0	1	1	1	1	Metallo-peptidase	family	M12
Peptidase_M66	PF10462.4	gi|449066592|ref|YP_007433674.1|	-	0.0073	15.2	0.0	0.012	14.5	0.0	1.3	1	0	0	1	1	1	1	Peptidase	M66
Reprolysin	PF01421.14	gi|449066592|ref|YP_007433674.1|	-	0.011	15.3	0.6	0.019	14.5	0.1	1.7	2	0	0	2	2	2	0	Reprolysin	(M12B)	family	zinc	metalloprotease
Metallopep	PF12044.3	gi|449066592|ref|YP_007433674.1|	-	0.011	14.1	0.1	0.015	13.7	0.1	1.1	1	0	0	1	1	1	0	Putative	peptidase	family
Archease	PF01951.11	gi|449066593|ref|YP_007433675.1|	-	2.1e-44	150.7	0.7	2.4e-44	150.6	0.5	1.0	1	0	0	1	1	1	1	Archease	protein	family	(MTH1598/TM1083)
UPF0150	PF03681.10	gi|449066593|ref|YP_007433675.1|	-	0.048	13.3	0.1	0.25	10.9	0.1	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0150)
PsbT	PF01405.12	gi|449066595|ref|YP_007433677.1|	-	4.5	6.9	7.9	25	4.5	0.2	2.9	2	0	0	2	2	2	0	Photosystem	II	reaction	centre	T	protein
DUF340	PF03956.8	gi|449066596|ref|YP_007433678.1|	-	0.035	13.3	0.2	0.037	13.3	0.2	1.0	1	0	0	1	1	1	0	Membrane	protein	of	unknown	function	(DUF340)
BTP	PF05232.7	gi|449066596|ref|YP_007433678.1|	-	4	7.2	8.0	4.4	7.1	1.4	2.1	2	0	0	2	2	2	0	Bacterial	Transmembrane	Pair	family
Cytidylate_kin2	PF13189.1	gi|449066597|ref|YP_007433679.1|	-	4.5e-23	82.0	0.7	2.3e-22	79.7	0.5	1.8	1	1	0	1	1	1	1	Cytidylate	kinase-like	family
AAA_18	PF13238.1	gi|449066597|ref|YP_007433679.1|	-	3.6e-22	79.0	0.5	4.6e-22	78.6	0.3	1.1	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|449066597|ref|YP_007433679.1|	-	1.8e-14	54.6	0.8	3e-14	53.8	0.5	1.5	1	1	0	1	1	1	1	AAA	domain
SKI	PF01202.17	gi|449066597|ref|YP_007433679.1|	-	1.9e-06	27.8	0.5	3.7e-06	26.9	0.3	1.6	1	1	0	1	1	1	1	Shikimate	kinase
AAA_33	PF13671.1	gi|449066597|ref|YP_007433679.1|	-	2.4e-06	27.4	0.0	0.0052	16.6	0.0	2.1	2	0	0	2	2	2	2	AAA	domain
ADK	PF00406.17	gi|449066597|ref|YP_007433679.1|	-	0.00011	22.1	0.0	0.00051	19.9	0.0	1.9	2	0	0	2	2	2	1	Adenylate	kinase
AAA_24	PF13479.1	gi|449066597|ref|YP_007433679.1|	-	0.00014	21.5	0.0	0.00018	21.1	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|449066597|ref|YP_007433679.1|	-	0.00065	19.9	0.1	0.0012	19.1	0.0	1.6	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Cytidylate_kin	PF02224.13	gi|449066597|ref|YP_007433679.1|	-	0.00081	18.8	0.2	0.0011	18.4	0.1	1.3	1	0	0	1	1	1	1	Cytidylate	kinase
Thymidylate_kin	PF02223.12	gi|449066597|ref|YP_007433679.1|	-	0.0015	17.9	0.1	0.44	9.8	0.0	2.4	2	1	0	2	2	2	1	Thymidylate	kinase
CoaE	PF01121.15	gi|449066597|ref|YP_007433679.1|	-	0.0024	17.2	0.0	0.38	10.1	0.0	2.2	2	0	0	2	2	2	1	Dephospho-CoA	kinase
PRK	PF00485.13	gi|449066597|ref|YP_007433679.1|	-	0.0027	17.2	0.7	0.3	10.6	0.0	2.2	1	1	0	2	2	2	1	Phosphoribulokinase	/	Uridine	kinase	family
KTI12	PF08433.5	gi|449066597|ref|YP_007433679.1|	-	0.0027	16.9	0.0	0.0037	16.5	0.0	1.3	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
RNA_helicase	PF00910.17	gi|449066597|ref|YP_007433679.1|	-	0.0054	16.8	0.1	0.0096	16.0	0.1	1.5	1	1	0	1	1	1	1	RNA	helicase
Rad17	PF03215.10	gi|449066597|ref|YP_007433679.1|	-	0.0062	15.2	0.0	0.0075	15.0	0.0	1.2	1	0	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
AAA_22	PF13401.1	gi|449066597|ref|YP_007433679.1|	-	0.0063	16.6	0.0	0.0098	16.0	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
NTPase_1	PF03266.10	gi|449066597|ref|YP_007433679.1|	-	0.0071	16.0	0.0	0.013	15.2	0.0	1.6	1	0	0	1	1	1	1	NTPase
Zeta_toxin	PF06414.7	gi|449066597|ref|YP_007433679.1|	-	0.0077	15.3	0.0	0.012	14.7	0.0	1.4	1	0	0	1	1	1	1	Zeta	toxin
RuvB_N	PF05496.7	gi|449066597|ref|YP_007433679.1|	-	0.0094	15.0	0.1	0.022	13.8	0.0	1.6	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_28	PF13521.1	gi|449066597|ref|YP_007433679.1|	-	0.013	15.4	0.0	0.022	14.7	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_5	PF07728.9	gi|449066597|ref|YP_007433679.1|	-	0.018	14.7	0.0	0.033	13.9	0.0	1.5	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.1	gi|449066597|ref|YP_007433679.1|	-	0.031	14.2	0.3	0.046	13.6	0.2	1.5	1	1	0	1	1	1	0	AAA	ATPase	domain
ABC_tran	PF00005.22	gi|449066597|ref|YP_007433679.1|	-	0.032	14.5	0.5	0.047	13.9	0.3	1.4	1	1	0	1	1	1	0	ABC	transporter
UPF0160	PF03690.8	gi|449066597|ref|YP_007433679.1|	-	0.036	13.4	0.1	0.04	13.3	0.0	1.1	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0160)
AAA_19	PF13245.1	gi|449066597|ref|YP_007433679.1|	-	0.058	13.1	0.0	0.11	12.2	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
Mg_chelatase	PF01078.16	gi|449066597|ref|YP_007433679.1|	-	0.062	12.4	0.1	0.11	11.6	0.1	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
Sigma54_activ_2	PF14532.1	gi|449066597|ref|YP_007433679.1|	-	0.07	13.1	0.0	0.13	12.3	0.0	1.5	1	1	0	1	1	1	0	Sigma-54	interaction	domain
dNK	PF01712.14	gi|449066597|ref|YP_007433679.1|	-	0.071	13.0	0.1	0.12	12.2	0.0	1.5	1	1	0	1	1	1	0	Deoxynucleoside	kinase
APS_kinase	PF01583.15	gi|449066597|ref|YP_007433679.1|	-	0.087	12.4	0.0	0.18	11.4	0.0	1.6	2	0	0	2	2	2	0	Adenylylsulphate	kinase
CobU	PF02283.11	gi|449066597|ref|YP_007433679.1|	-	0.1	11.9	0.0	0.14	11.5	0.0	1.4	1	1	0	1	1	1	0	Cobinamide	kinase	/	cobinamide	phosphate	guanyltransferase
Ribosomal_L34e	PF01199.13	gi|449066598|ref|YP_007433680.1|	-	4.8e-27	94.0	3.5	5.2e-27	93.9	2.4	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L34e
zf-P11	PF03854.9	gi|449066598|ref|YP_007433680.1|	-	0.013	14.9	1.9	2.5	7.6	0.1	2.2	2	0	0	2	2	2	0	P-11	zinc	finger
DUF581	PF04570.9	gi|449066598|ref|YP_007433680.1|	-	0.016	14.4	0.2	0.016	14.4	0.1	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF581)
Gin	PF10764.4	gi|449066598|ref|YP_007433680.1|	-	0.036	13.7	0.3	0.41	10.3	0.0	2.2	2	0	0	2	2	2	0	Inhibitor	of	sigma-G	Gin
zf-C3HC4_3	PF13920.1	gi|449066598|ref|YP_007433680.1|	-	0.12	12.1	0.8	4.7	6.9	0.0	2.1	2	0	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
DUF3133	PF11331.3	gi|449066598|ref|YP_007433680.1|	-	0.27	10.8	1.8	2.2	7.9	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3133)
Synaptobrevin	PF00957.16	gi|449066599|ref|YP_007433681.1|	-	8e-05	22.1	0.1	8e-05	22.1	0.0	2.3	3	0	0	3	3	3	1	Synaptobrevin
SPC12	PF06645.8	gi|449066599|ref|YP_007433681.1|	-	0.022	14.5	0.2	0.022	14.5	0.1	2.7	3	0	0	3	3	3	0	Microsomal	signal	peptidase	12	kDa	subunit	(SPC12)
Cytochrom_B_N	PF00033.14	gi|449066599|ref|YP_007433681.1|	-	0.023	14.0	2.6	0.025	13.9	0.8	1.7	1	1	1	2	2	2	0	Cytochrome	b(N-terminal)/b6/petB
DUF106	PF01956.11	gi|449066599|ref|YP_007433681.1|	-	0.031	13.8	2.9	0.05	13.1	2.0	1.4	1	1	0	1	1	1	0	Integral	membrane	protein	DUF106
Reticulon	PF02453.12	gi|449066599|ref|YP_007433681.1|	-	0.26	10.8	4.9	0.12	11.9	1.5	1.7	2	0	0	2	2	2	0	Reticulon
DUF4271	PF14093.1	gi|449066599|ref|YP_007433681.1|	-	0.52	9.9	12.0	41	3.7	8.3	2.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4271)
DUF2207	PF09972.4	gi|449066599|ref|YP_007433681.1|	-	6.8	5.1	7.4	0.68	8.4	1.4	1.8	1	1	1	2	2	2	0	Predicted	membrane	protein	(DUF2207)
AAA_18	PF13238.1	gi|449066600|ref|YP_007433682.1|	-	1.4e-11	44.7	0.1	1.8e-11	44.4	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|449066600|ref|YP_007433682.1|	-	4.9e-08	33.8	0.1	7e-08	33.3	0.1	1.3	1	1	0	1	1	1	1	AAA	domain
Thymidylate_kin	PF02223.12	gi|449066600|ref|YP_007433682.1|	-	9.4e-06	25.1	0.1	0.11	11.8	0.0	2.9	3	0	0	3	3	3	2	Thymidylate	kinase
SRP54	PF00448.17	gi|449066600|ref|YP_007433682.1|	-	0.00012	21.6	0.0	0.00015	21.2	0.0	1.2	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
NTPase_1	PF03266.10	gi|449066600|ref|YP_007433682.1|	-	0.00031	20.4	0.2	0.00061	19.5	0.2	1.4	1	0	0	1	1	1	1	NTPase
ArgK	PF03308.11	gi|449066600|ref|YP_007433682.1|	-	0.00072	18.4	0.1	0.0013	17.6	0.1	1.4	1	0	0	1	1	1	1	ArgK	protein
AAA_22	PF13401.1	gi|449066600|ref|YP_007433682.1|	-	0.0013	18.9	0.0	0.0019	18.3	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
KTI12	PF08433.5	gi|449066600|ref|YP_007433682.1|	-	0.0019	17.4	0.0	0.0027	16.9	0.0	1.3	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
ATP_bind_1	PF03029.12	gi|449066600|ref|YP_007433682.1|	-	0.0028	17.2	0.0	0.0037	16.8	0.0	1.2	1	0	0	1	1	1	1	Conserved	hypothetical	ATP	binding	protein
AAA_14	PF13173.1	gi|449066600|ref|YP_007433682.1|	-	0.0047	16.8	0.2	0.013	15.4	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|449066600|ref|YP_007433682.1|	-	0.0055	16.5	0.0	0.02	14.7	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_30	PF13604.1	gi|449066600|ref|YP_007433682.1|	-	0.0072	15.9	0.0	0.016	14.8	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_28	PF13521.1	gi|449066600|ref|YP_007433682.1|	-	0.014	15.3	0.0	0.033	14.1	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
AAA_19	PF13245.1	gi|449066600|ref|YP_007433682.1|	-	0.043	13.5	0.1	0.12	12.1	0.1	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
APS_kinase	PF01583.15	gi|449066600|ref|YP_007433682.1|	-	0.044	13.4	0.1	0.082	12.5	0.0	1.5	1	1	0	1	1	1	0	Adenylylsulphate	kinase
AAA_16	PF13191.1	gi|449066600|ref|YP_007433682.1|	-	0.05	13.5	0.0	0.071	13.0	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
DUF2075	PF09848.4	gi|449066600|ref|YP_007433682.1|	-	0.063	12.2	0.1	0.085	11.8	0.1	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
MobB	PF03205.9	gi|449066600|ref|YP_007433682.1|	-	0.071	12.8	0.3	0.22	11.2	0.2	1.9	1	1	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
MMR_HSR1	PF01926.18	gi|449066600|ref|YP_007433682.1|	-	0.1	12.5	0.3	0.18	11.7	0.1	1.6	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
PRK	PF00485.13	gi|449066600|ref|YP_007433682.1|	-	0.11	12.0	0.0	0.18	11.3	0.0	1.3	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
Viral_helicase1	PF01443.13	gi|449066600|ref|YP_007433682.1|	-	0.14	11.6	0.0	0.2	11.1	0.0	1.4	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
SecY	PF00344.15	gi|449066601|ref|YP_007433683.1|	-	3.3e-79	266.3	35.2	4.8e-79	265.8	24.4	1.2	1	0	0	1	1	1	1	SecY	translocase
Plug_translocon	PF10559.4	gi|449066601|ref|YP_007433683.1|	-	2.6e-09	36.4	2.5	2.6e-09	36.4	1.7	2.7	2	0	0	2	2	2	1	Plug	domain	of	Sec61p
Ribosomal_L18e	PF00828.14	gi|449066602|ref|YP_007433684.1|	-	3.2e-30	105.1	2.9	4.1e-30	104.8	2.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L18e/L15
Ribosomal_L30	PF00327.15	gi|449066603|ref|YP_007433685.1|	-	2e-13	49.6	0.0	4.4e-13	48.5	0.0	1.6	2	0	0	2	2	2	1	Ribosomal	protein	L30p/L7e
DUF4368	PF14287.1	gi|449066603|ref|YP_007433685.1|	-	0.087	12.6	0.0	0.19	11.5	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4368)
Ribosomal_S5_C	PF03719.10	gi|449066604|ref|YP_007433686.1|	-	1.7e-20	72.0	0.0	3.7e-20	70.9	0.0	1.6	1	0	0	1	1	1	1	Ribosomal	protein	S5,	C-terminal	domain
Ribosomal_S5	PF00333.15	gi|449066604|ref|YP_007433686.1|	-	1.4e-17	63.1	0.4	2.4e-17	62.3	0.3	1.4	1	0	0	1	1	1	1	Ribosomal	protein	S5,	N-terminal	domain
Hs1pro-1_N	PF07231.7	gi|449066604|ref|YP_007433686.1|	-	0.044	13.3	0.0	0.068	12.7	0.0	1.3	1	0	0	1	1	1	0	Hs1pro-1	N-terminus
OCIA	PF07051.6	gi|449066604|ref|YP_007433686.1|	-	0.075	12.4	0.0	0.12	11.7	0.0	1.3	1	0	0	1	1	1	0	Ovarian	carcinoma	immunoreactive	antigen	(OCIA)
Ribosomal_L18p	PF00861.17	gi|449066605|ref|YP_007433687.1|	-	2.3e-34	118.1	0.3	3.6e-34	117.5	0.1	1.4	2	0	0	2	2	2	1	Ribosomal	L18p/L5e	family
Ribosomal_L18_c	PF14204.1	gi|449066605|ref|YP_007433687.1|	-	6.9e-12	45.7	0.0	1.1e-11	45.1	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	L18	C-terminal	region
Ribosomal_L19e	PF01280.15	gi|449066606|ref|YP_007433688.1|	-	6.6e-51	171.9	10.7	7.2e-51	171.8	7.4	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L19e
PEPCK_ATP	PF01293.15	gi|449066606|ref|YP_007433688.1|	-	0.025	13.1	0.1	0.031	12.8	0.1	1.1	1	0	0	1	1	1	0	Phosphoenolpyruvate	carboxykinase
S4	PF01479.20	gi|449066606|ref|YP_007433688.1|	-	0.14	11.6	2.1	0.14	11.5	0.0	2.0	2	0	0	2	2	2	0	S4	domain
Ribosomal_L32e	PF01655.13	gi|449066607|ref|YP_007433689.1|	-	1.2e-37	128.3	0.4	1.4e-37	128.1	0.3	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L32
DUF3933	PF13069.1	gi|449066607|ref|YP_007433689.1|	-	0.17	11.6	0.4	11	5.7	0.1	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3933)
Ribosomal_L6	PF00347.18	gi|449066608|ref|YP_007433690.1|	-	5.9e-28	97.1	8.8	1.3e-13	51.2	0.8	2.1	2	0	0	2	2	2	2	Ribosomal	protein	L6
RNA_bind_2	PF10133.4	gi|449066608|ref|YP_007433690.1|	-	0.028	14.4	3.5	1.7	8.7	0.3	3.2	2	2	1	3	3	3	0	Predicted	RNA-binding	protein
DNA_ligase_OB	PF03120.11	gi|449066608|ref|YP_007433690.1|	-	0.076	12.6	1.2	0.18	11.4	0.2	2.0	2	1	0	2	2	2	0	NAD-dependent	DNA	ligase	OB-fold	domain
ETRAMP	PF09716.5	gi|449066608|ref|YP_007433690.1|	-	0.084	12.8	0.4	0.17	11.8	0.2	1.6	1	0	0	1	1	1	0	Malarial	early	transcribed	membrane	protein	(ETRAMP)
Ribosomal_S8	PF00410.14	gi|449066609|ref|YP_007433691.1|	-	3.3e-23	81.9	0.0	4.3e-23	81.5	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S8
Ribosomal_S14	PF00253.16	gi|449066610|ref|YP_007433692.1|	-	4.9e-15	54.6	4.7	5.3e-15	54.5	3.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S14p/S29e
zf-HYPF	PF07503.7	gi|449066610|ref|YP_007433692.1|	-	0.00015	21.0	0.4	0.029	13.7	0.0	2.2	2	0	0	2	2	2	2	HypF	finger
Zn_Tnp_IS1595	PF12760.2	gi|449066610|ref|YP_007433692.1|	-	0.0013	18.4	1.9	0.0018	18.0	1.3	1.2	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
zf-FPG_IleRS	PF06827.9	gi|449066610|ref|YP_007433692.1|	-	0.027	14.0	2.1	0.045	13.3	1.4	1.3	1	0	0	1	1	1	0	Zinc	finger	found	in	FPG	and	IleRS
zf-P11	PF03854.9	gi|449066610|ref|YP_007433692.1|	-	0.034	13.6	0.9	0.046	13.1	0.6	1.2	1	0	0	1	1	1	0	P-11	zinc	finger
Ribosomal_L37ae	PF01780.14	gi|449066610|ref|YP_007433692.1|	-	0.098	12.5	0.2	0.13	12.1	0.2	1.2	1	0	0	1	1	1	0	Ribosomal	L37ae	protein	family
DNA_RNApol_7kD	PF03604.8	gi|449066610|ref|YP_007433692.1|	-	0.14	11.6	2.2	5.1	6.6	0.1	2.2	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
A2L_zn_ribbon	PF08792.5	gi|449066610|ref|YP_007433692.1|	-	0.14	11.6	2.1	0.2	11.1	1.5	1.1	1	0	0	1	1	1	0	A2L	zinc	ribbon	domain
DZR	PF12773.2	gi|449066610|ref|YP_007433692.1|	-	0.16	11.7	0.9	0.25	11.2	0.6	1.4	1	1	0	1	1	1	0	Double	zinc	ribbon
Ribosomal_L5_C	PF00673.16	gi|449066611|ref|YP_007433693.1|	-	4.4e-25	87.2	0.0	8e-25	86.4	0.0	1.4	1	0	0	1	1	1	1	ribosomal	L5P	family	C-terminus
Ribosomal_L5	PF00281.14	gi|449066611|ref|YP_007433693.1|	-	8.8e-22	76.6	0.1	1.6e-21	75.8	0.1	1.5	1	0	0	1	1	1	1	Ribosomal	protein	L5
Ribosomal_S4e	PF00900.15	gi|449066612|ref|YP_007433694.1|	-	2.4e-24	84.8	0.2	6.6e-24	83.3	0.2	1.8	1	0	0	1	1	1	1	Ribosomal	family	S4e
S4	PF01479.20	gi|449066612|ref|YP_007433694.1|	-	2.6e-12	45.9	0.1	5.6e-12	44.8	0.1	1.6	1	0	0	1	1	1	1	S4	domain
RS4NT	PF08071.7	gi|449066612|ref|YP_007433694.1|	-	2.4e-07	30.4	0.3	4.4e-07	29.6	0.2	1.5	1	0	0	1	1	1	1	RS4NT	(NUC023)	domain
S4_2	PF13275.1	gi|449066612|ref|YP_007433694.1|	-	0.0019	17.7	0.0	0.0043	16.6	0.0	1.5	1	0	0	1	1	1	1	S4	domain
Rad60-SLD	PF11976.3	gi|449066612|ref|YP_007433694.1|	-	0.002	17.7	0.0	0.0093	15.6	0.0	2.1	2	0	0	2	2	2	1	Ubiquitin-2	like	Rad60	SUMO-like
KOW	PF00467.24	gi|449066612|ref|YP_007433694.1|	-	0.019	14.6	0.0	0.068	12.9	0.0	1.9	1	0	0	1	1	1	0	KOW	motif
KOW	PF00467.24	gi|449066613|ref|YP_007433695.1|	-	1e-06	28.2	2.3	2.1e-06	27.2	1.6	1.5	1	0	0	1	1	1	1	KOW	motif
SH3_2	PF07653.12	gi|449066613|ref|YP_007433695.1|	-	0.12	11.9	0.1	0.21	11.1	0.1	1.4	1	0	0	1	1	1	0	Variant	SH3	domain
Ribosomal_L14	PF00238.14	gi|449066614|ref|YP_007433696.1|	-	5.5e-37	126.2	0.1	6.3e-37	126.0	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L14p/L23e
PAS_3	PF08447.6	gi|449066614|ref|YP_007433696.1|	-	0.036	14.1	0.0	0.049	13.7	0.0	1.4	1	0	0	1	1	1	0	PAS	fold
Ribosomal_S17	PF00366.15	gi|449066615|ref|YP_007433697.1|	-	7.9e-18	64.2	0.2	1e-17	63.9	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S17
UPF0086	PF01868.11	gi|449066616|ref|YP_007433698.1|	-	2.3e-15	55.9	0.1	2.5e-15	55.8	0.1	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	UPF0086
Ribosomal_L29	PF00831.18	gi|449066617|ref|YP_007433699.1|	-	2e-20	72.2	6.5	2.4e-20	71.9	4.5	1.1	1	0	0	1	1	1	1	Ribosomal	L29	protein
DUF29	PF01724.11	gi|449066617|ref|YP_007433699.1|	-	0.00023	21.0	1.9	0.00026	20.8	1.3	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF29
SPX	PF03105.14	gi|449066617|ref|YP_007433699.1|	-	0.039	13.7	0.9	0.038	13.7	0.6	1.1	1	0	0	1	1	1	0	SPX	domain
DUF1828	PF08861.5	gi|449066617|ref|YP_007433699.1|	-	0.1	12.2	0.3	0.12	11.9	0.2	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF1828
DUF4208	PF13907.1	gi|449066617|ref|YP_007433699.1|	-	0.27	11.4	2.9	0.31	11.2	2.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4208)
DUF1319	PF07028.6	gi|449066617|ref|YP_007433699.1|	-	0.67	10.1	5.0	1.5	9.0	1.5	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1319)
Ribosomal_S3_C	PF00189.15	gi|449066618|ref|YP_007433700.1|	-	3.5e-17	62.3	2.3	4.5e-17	62.0	0.7	1.9	2	0	0	2	2	2	1	Ribosomal	protein	S3,	C-terminal	domain
KH_2	PF07650.12	gi|449066618|ref|YP_007433700.1|	-	4.8e-15	54.8	1.9	5.7e-15	54.6	0.0	2.1	3	0	0	3	3	3	1	KH	domain
KH_3	PF13014.1	gi|449066618|ref|YP_007433700.1|	-	0.0097	15.5	1.3	0.015	14.9	0.1	1.9	2	0	0	2	2	2	1	KH	domain
KH_1	PF00013.24	gi|449066618|ref|YP_007433700.1|	-	0.011	15.3	0.3	0.011	15.3	0.2	2.3	2	0	0	2	2	2	0	KH	domain
Ribosomal_L22	PF00237.14	gi|449066619|ref|YP_007433701.1|	-	1.4e-33	114.9	0.3	1.6e-33	114.7	0.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L22p/L17e
Ribosomal_S19	PF00203.16	gi|449066620|ref|YP_007433702.1|	-	5e-26	90.1	1.0	6.6e-26	89.7	0.7	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S19
DUF4172	PF13776.1	gi|449066620|ref|YP_007433702.1|	-	0.014	15.4	0.2	4.8	7.3	0.0	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4172)
MerR_1	PF13411.1	gi|449066620|ref|YP_007433702.1|	-	0.27	11.0	2.2	0.21	11.3	0.5	1.6	2	0	0	2	2	2	0	MerR	HTH	family	regulatory	protein
Ribosomal_L2_C	PF03947.13	gi|449066621|ref|YP_007433703.1|	-	1.9e-40	137.6	1.7	3.3e-40	136.9	1.1	1.4	1	0	0	1	1	1	1	Ribosomal	Proteins	L2,	C-terminal	domain
Ribosomal_L2	PF00181.18	gi|449066621|ref|YP_007433703.1|	-	9.7e-12	44.6	0.0	2.7e-11	43.2	0.0	1.8	1	0	0	1	1	1	1	Ribosomal	Proteins	L2,	RNA	binding	domain
Ribosomal_L23	PF00276.15	gi|449066622|ref|YP_007433704.1|	-	1.5e-15	56.8	7.9	2.1e-15	56.4	5.5	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L23
ASL_C	PF08328.6	gi|449066622|ref|YP_007433704.1|	-	0.011	15.5	0.6	0.013	15.2	0.4	1.1	1	0	0	1	1	1	0	Adenylosuccinate	lyase	C-terminal
DUF2959	PF11172.3	gi|449066622|ref|YP_007433704.1|	-	0.014	15.1	0.2	0.016	14.9	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2959)
TusA	PF01206.12	gi|449066622|ref|YP_007433704.1|	-	0.034	13.7	0.6	0.046	13.3	0.3	1.4	1	1	0	1	1	1	0	Sulfurtransferase	TusA
DUF3427	PF11907.3	gi|449066622|ref|YP_007433704.1|	-	0.051	12.5	0.3	0.051	12.5	0.2	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3427)
THOC7	PF05615.8	gi|449066622|ref|YP_007433704.1|	-	0.065	13.5	1.0	0.073	13.3	0.7	1.0	1	0	0	1	1	1	0	Tho	complex	subunit	7
SapB_1	PF05184.10	gi|449066622|ref|YP_007433704.1|	-	0.67	9.8	3.3	4.9	7.0	2.3	2.3	1	1	0	1	1	1	0	Saposin-like	type	B,	region	1
Ribosomal_L4	PF00573.17	gi|449066623|ref|YP_007433705.1|	-	1.1e-35	122.8	0.1	1.3e-35	122.5	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L4/L1	family
DUF2149	PF09919.4	gi|449066623|ref|YP_007433705.1|	-	0.046	13.8	0.1	0.083	12.9	0.0	1.5	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2149)
DUF3913	PF13052.1	gi|449066623|ref|YP_007433705.1|	-	0.099	12.5	0.3	0.23	11.4	0.2	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3913)
Ribosomal_L3	PF00297.17	gi|449066624|ref|YP_007433706.1|	-	7.6e-56	189.4	0.0	8.8e-56	189.2	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L3
Methyltrn_RNA_3	PF02598.12	gi|449066625|ref|YP_007433707.1|	-	9.1e-29	100.7	0.2	7.9e-20	71.3	0.2	2.1	1	1	1	2	2	2	2	Putative	RNA	methyltransferase
tRNA-synt_1	PF00133.17	gi|449066626|ref|YP_007433708.1|	-	3.4e-188	626.4	1.1	4.7e-188	625.9	0.8	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|449066626|ref|YP_007433708.1|	-	1.1e-28	99.9	2.5	2.7e-28	98.6	1.7	1.7	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.6	gi|449066626|ref|YP_007433708.1|	-	4.5e-21	74.9	8.9	3.2e-07	29.3	0.0	5.2	3	2	1	4	4	4	3	tRNA	synthetases	class	I	(M)
tRNA-synt_1f	PF01921.13	gi|449066626|ref|YP_007433708.1|	-	6.5e-05	21.7	0.0	0.00019	20.2	0.0	1.7	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(K)
tRNA-synt_1_2	PF13603.1	gi|449066626|ref|YP_007433708.1|	-	9.8e-05	21.7	0.0	0.0011	18.2	0.0	2.6	2	1	0	2	2	2	1	Leucyl-tRNA	synthetase,	Domain	2
Rpr2	PF04032.11	gi|449066626|ref|YP_007433708.1|	-	0.02	14.7	1.8	0.28	11.0	0.2	3.1	3	0	0	3	3	3	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
Iso_dh	PF00180.15	gi|449066627|ref|YP_007433709.1|	-	7.8e-91	304.5	0.5	9.1e-91	304.3	0.3	1.0	1	0	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
PdxA	PF04166.7	gi|449066627|ref|YP_007433709.1|	-	0.011	14.9	0.0	0.023	13.8	0.0	1.4	1	0	0	1	1	1	0	Pyridoxal	phosphate	biosynthetic	protein	PdxA
DUF447	PF04289.7	gi|449066628|ref|YP_007433710.1|	-	7.8e-39	133.0	0.0	9.4e-39	132.7	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF447)
HAD_2	PF13419.1	gi|449066629|ref|YP_007433711.1|	-	3.4e-25	89.2	0.0	4.3e-25	88.9	0.0	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|449066629|ref|YP_007433711.1|	-	1.2e-11	44.1	0.0	2.2e-11	43.2	0.0	1.4	1	0	0	1	1	1	1	HAD-hyrolase-like
Hydrolase	PF00702.21	gi|449066629|ref|YP_007433711.1|	-	5.6e-10	39.9	0.0	1.1e-09	38.9	0.0	1.5	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.2	gi|449066629|ref|YP_007433711.1|	-	1.2e-05	25.5	0.4	2.3e-05	24.6	0.3	1.5	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
ATP-cone	PF03477.11	gi|449066629|ref|YP_007433711.1|	-	0.012	16.0	0.0	0.024	15.0	0.0	1.5	1	0	0	1	1	1	0	ATP	cone	domain
Hydrolase_6	PF13344.1	gi|449066629|ref|YP_007433711.1|	-	0.024	14.5	0.0	0.19	11.6	0.0	2.4	3	0	0	3	3	3	0	Haloacid	dehalogenase-like	hydrolase
DUF2247	PF10004.4	gi|449066629|ref|YP_007433711.1|	-	0.14	11.8	3.3	0.25	11.0	2.3	1.5	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2247)
GTP_EFTU	PF00009.22	gi|449066630|ref|YP_007433712.1|	-	6.1e-59	198.6	0.2	9.5e-59	197.9	0.1	1.3	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
EFG_IV	PF03764.13	gi|449066630|ref|YP_007433712.1|	-	1e-32	112.1	0.1	6.6e-32	109.5	0.0	2.4	3	0	0	3	3	3	1	Elongation	factor	G,	domain	IV
EFG_II	PF14492.1	gi|449066630|ref|YP_007433712.1|	-	2.2e-21	75.5	0.1	6.5e-21	73.9	0.0	1.9	1	0	0	1	1	1	1	Elongation	Factor	G,	domain	II
EFG_C	PF00679.19	gi|449066630|ref|YP_007433712.1|	-	1.4e-20	72.8	0.0	5.1e-20	71.1	0.0	2.0	2	0	0	2	2	2	1	Elongation	factor	G	C-terminus
GTP_EFTU_D2	PF03144.20	gi|449066630|ref|YP_007433712.1|	-	9.8e-11	41.6	0.1	4.8e-10	39.4	0.0	2.3	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.18	gi|449066630|ref|YP_007433712.1|	-	0.00021	21.2	0.1	0.00054	19.9	0.1	1.7	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
ERCC4	PF02732.10	gi|449066631|ref|YP_007433713.1|	-	1.4e-26	93.0	0.3	2.4e-26	92.1	0.2	1.4	1	0	0	1	1	1	1	ERCC4	domain
HHH_2	PF12826.2	gi|449066631|ref|YP_007433713.1|	-	9.6e-07	28.6	0.0	2.8e-06	27.0	0.0	1.9	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_5	PF14520.1	gi|449066631|ref|YP_007433713.1|	-	8.5e-05	22.6	0.3	0.00043	20.3	0.0	2.3	3	0	0	3	3	3	1	Helix-hairpin-helix	domain
5_3_exonuc	PF01367.15	gi|449066631|ref|YP_007433713.1|	-	0.00031	20.9	0.2	0.00084	19.5	0.0	1.8	2	0	0	2	2	2	1	5'-3'	exonuclease,	C-terminal	SAM	fold
IMS_HHH	PF11798.3	gi|449066631|ref|YP_007433713.1|	-	0.084	12.9	0.0	0.49	10.5	0.0	2.3	2	0	0	2	2	2	0	IMS	family	HHH	motif
Prefoldin_2	PF01920.15	gi|449066632|ref|YP_007433714.1|	-	4e-23	81.2	17.9	4.5e-23	81.0	12.4	1.0	1	0	0	1	1	1	1	Prefoldin	subunit
DUF424	PF04242.8	gi|449066632|ref|YP_007433714.1|	-	0.0073	16.3	0.2	0.018	15.0	0.1	1.6	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF424)
DUF3584	PF12128.3	gi|449066632|ref|YP_007433714.1|	-	0.026	11.8	6.0	0.036	11.4	4.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
Methyltransf_27	PF13708.1	gi|449066632|ref|YP_007433714.1|	-	0.035	13.6	0.4	0.14	11.6	0.3	1.8	1	1	0	1	1	1	0	Methyltransferase	domain
Sas10	PF09368.5	gi|449066632|ref|YP_007433714.1|	-	0.064	13.4	2.4	0.1	12.7	1.6	1.3	1	0	0	1	1	1	0	Sas10	C-terminal	domain
MIF4G_like_2	PF09090.6	gi|449066632|ref|YP_007433714.1|	-	0.12	11.5	4.1	0.16	11.1	2.9	1.3	1	0	0	1	1	1	0	MIF4G	like
ThiS	PF02597.15	gi|449066632|ref|YP_007433714.1|	-	0.13	12.6	1.6	0.2	12.1	0.5	1.8	2	0	0	2	2	2	0	ThiS	family
DUF87	PF01935.12	gi|449066632|ref|YP_007433714.1|	-	0.16	11.7	4.1	0.19	11.4	2.8	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF87
Prefoldin	PF02996.12	gi|449066632|ref|YP_007433714.1|	-	0.41	10.3	12.5	2.2	7.9	4.1	2.3	1	1	1	2	2	2	0	Prefoldin	subunit
RseA_C	PF03873.8	gi|449066632|ref|YP_007433714.1|	-	0.5	10.2	5.6	0.23	11.3	0.9	2.2	2	0	0	2	2	2	0	Anti	sigma-E	protein	RseA,	C-terminal	domain
DUF3186	PF11382.3	gi|449066632|ref|YP_007433714.1|	-	0.51	9.4	5.8	0.29	10.2	0.7	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3186)
TPR_MLP1_2	PF07926.7	gi|449066632|ref|YP_007433714.1|	-	0.86	9.3	12.9	1.7	8.4	3.1	2.1	2	0	0	2	2	2	0	TPR/MLP1/MLP2-like	protein
DUF4140	PF13600.1	gi|449066632|ref|YP_007433714.1|	-	1.2	9.5	4.7	2.7	8.4	0.4	2.2	2	0	0	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
UPF0449	PF15136.1	gi|449066632|ref|YP_007433714.1|	-	1.8	8.7	7.8	0.38	10.9	1.7	1.9	1	1	1	2	2	2	0	Uncharacterised	protein	family	UPF0449
CENP-F_leu_zip	PF10473.4	gi|449066632|ref|YP_007433714.1|	-	2.4	8.0	17.3	4	7.2	6.4	2.3	1	1	1	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Gon7	PF08738.5	gi|449066632|ref|YP_007433714.1|	-	3.2	7.7	6.5	13	5.8	1.4	2.5	2	1	0	2	2	2	0	Gon7	family
SlyX	PF04102.7	gi|449066632|ref|YP_007433714.1|	-	3.4	8.0	10.1	0.4	11.0	1.6	2.2	2	0	0	2	2	2	0	SlyX
DUF4559	PF15112.1	gi|449066632|ref|YP_007433714.1|	-	4.2	6.4	9.6	8.4	5.4	6.6	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4559)
PilO	PF04350.8	gi|449066632|ref|YP_007433714.1|	-	7.7	6.3	11.6	6.2	6.7	1.6	2.3	1	1	0	2	2	2	0	Pilus	assembly	protein,	PilO
U1snRNP70_N	PF12220.3	gi|449066632|ref|YP_007433714.1|	-	8.3	6.8	9.9	4.7	7.5	3.1	2.6	1	1	1	2	2	2	0	U1	small	nuclear	ribonucleoprotein	of	70kDa	MW	N	terminal
Pcc1	PF09341.5	gi|449066633|ref|YP_007433715.1|	-	0.0085	16.1	0.2	0.01	15.8	0.2	1.4	1	1	0	1	1	1	1	Transcription	factor	Pcc1
DUF2292	PF10055.4	gi|449066633|ref|YP_007433715.1|	-	1.2	8.5	3.4	3.1	7.2	0.1	2.8	2	1	1	3	3	3	0	Uncharacterized	small	protein	(DUF2292)
Brix	PF04427.13	gi|449066634|ref|YP_007433716.1|	-	6.3e-16	58.6	0.2	6.8e-16	58.4	0.1	1.1	1	0	0	1	1	1	1	Brix	domain
Ribosomal_L37ae	PF01780.14	gi|449066635|ref|YP_007433717.1|	-	2.9e-23	81.5	7.2	3e-23	81.4	5.0	1.0	1	0	0	1	1	1	1	Ribosomal	L37ae	protein	family
Zn_Tnp_IS1595	PF12760.2	gi|449066635|ref|YP_007433717.1|	-	0.0025	17.5	6.3	0.0037	17.0	4.2	1.5	1	1	1	2	2	2	1	Transposase	zinc-ribbon	domain
Rep_fac-A_C	PF08646.5	gi|449066635|ref|YP_007433717.1|	-	0.0048	16.6	1.6	0.0051	16.5	1.1	1.1	1	0	0	1	1	1	1	Replication	factor-A	C	terminal	domain
OrfB_Zn_ribbon	PF07282.6	gi|449066635|ref|YP_007433717.1|	-	0.014	15.0	1.5	0.017	14.7	1.0	1.2	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
DUF4379	PF14311.1	gi|449066635|ref|YP_007433717.1|	-	0.074	12.8	9.9	0.41	10.4	0.8	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4379)
DnaJ_CXXCXGXG	PF00684.14	gi|449066635|ref|YP_007433717.1|	-	0.21	11.6	2.1	0.38	10.8	1.4	1.5	1	1	0	1	1	1	0	DnaJ	central	domain
zf-H2C2_2	PF13465.1	gi|449066635|ref|YP_007433717.1|	-	0.26	11.6	2.8	0.29	11.4	0.2	2.0	2	0	0	2	2	2	0	Zinc-finger	double	domain
Prim_Zn_Ribbon	PF08273.7	gi|449066635|ref|YP_007433717.1|	-	0.4	10.7	5.6	0.51	10.4	2.8	1.9	2	1	0	2	2	2	0	Zinc-binding	domain	of	primase-helicase
PHD	PF00628.24	gi|449066635|ref|YP_007433717.1|	-	3.3	7.4	6.0	34	4.2	3.9	2.0	1	1	1	2	2	2	0	PHD-finger
RNase_PH	PF01138.16	gi|449066636|ref|YP_007433718.1|	-	1.2e-30	106.4	0.0	1.9e-30	105.8	0.0	1.3	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.10	gi|449066636|ref|YP_007433718.1|	-	2.9e-09	36.7	0.2	1.2e-08	34.7	0.0	2.1	2	0	0	2	2	2	1	3'	exoribonuclease	family,	domain	2
RNase_PH	PF01138.16	gi|449066637|ref|YP_007433719.1|	-	5.7e-37	126.9	0.0	8.4e-37	126.4	0.0	1.3	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.10	gi|449066637|ref|YP_007433719.1|	-	2.7e-13	49.6	0.0	5e-13	48.7	0.0	1.5	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	2
ketoacyl-synt	PF00109.21	gi|449066637|ref|YP_007433719.1|	-	0.1	12.0	0.0	0.14	11.6	0.0	1.2	1	0	0	1	1	1	0	Beta-ketoacyl	synthase,	N-terminal	domain
KH_1	PF00013.24	gi|449066638|ref|YP_007433720.1|	-	8.9e-07	28.4	0.7	2e-06	27.3	0.5	1.6	1	0	0	1	1	1	1	KH	domain
S1	PF00575.18	gi|449066638|ref|YP_007433720.1|	-	3.2e-05	23.9	0.0	6.1e-05	23.0	0.0	1.5	1	0	0	1	1	1	1	S1	RNA	binding	domain
KH_3	PF13014.1	gi|449066638|ref|YP_007433720.1|	-	0.0017	17.9	0.2	0.0017	17.9	0.1	2.1	2	0	0	2	2	2	1	KH	domain
KH_2	PF07650.12	gi|449066638|ref|YP_007433720.1|	-	0.045	13.3	0.1	0.1	12.1	0.1	1.6	1	0	0	1	1	1	0	KH	domain
SBDS	PF01172.13	gi|449066639|ref|YP_007433721.1|	-	2.5e-28	97.6	0.1	4.3e-28	96.9	0.1	1.4	1	0	0	1	1	1	1	Shwachman-Bodian-Diamond	syndrome	(SBDS)	protein
SBDS_C	PF09377.5	gi|449066639|ref|YP_007433721.1|	-	2.4e-21	75.7	0.8	3.9e-21	75.0	0.6	1.3	1	0	0	1	1	1	1	SBDS	protein	C-terminal	domain
P53_tetramer	PF07710.6	gi|449066639|ref|YP_007433721.1|	-	0.091	11.8	0.0	0.2	10.7	0.0	1.6	1	0	0	1	1	1	0	P53	tetramerisation	motif
Proteasome	PF00227.21	gi|449066640|ref|YP_007433722.1|	-	3.2e-59	199.4	0.0	4.6e-59	198.9	0.0	1.2	1	0	0	1	1	1	1	Proteasome	subunit
Proteasome_A_N	PF10584.4	gi|449066640|ref|YP_007433722.1|	-	4.4e-13	48.2	0.9	1.1e-12	46.9	0.3	2.0	2	0	0	2	2	2	1	Proteasome	subunit	A	N-terminal	signature
RNase_P_Rpp14	PF01900.14	gi|449066641|ref|YP_007433723.1|	-	2.6e-15	56.2	0.4	4.1e-15	55.6	0.1	1.4	2	0	0	2	2	2	1	Rpp14/Pop5	family
Tmemb_170	PF10190.4	gi|449066641|ref|YP_007433723.1|	-	0.032	14.2	0.5	0.041	13.9	0.4	1.3	1	0	0	1	1	1	0	Putative	transmembrane	protein	170
RNase_P_p30	PF01876.11	gi|449066642|ref|YP_007433724.1|	-	5.1e-20	71.2	0.2	6.6e-20	70.8	0.2	1.1	1	0	0	1	1	1	1	RNase	P	subunit	p30
Como_SCP	PF02248.11	gi|449066642|ref|YP_007433724.1|	-	0.031	13.6	0.1	0.043	13.1	0.1	1.3	1	0	0	1	1	1	0	Small	coat	protein
RNA_binding	PF01877.12	gi|449066643|ref|YP_007433725.1|	-	1.6e-26	92.6	1.4	2e-26	92.3	1.0	1.1	1	0	0	1	1	1	1	RNA	binding
Rsbr_N	PF08678.5	gi|449066643|ref|YP_007433725.1|	-	0.029	14.2	0.4	0.092	12.6	0.1	1.9	1	1	1	2	2	2	0	Rsbr	N	terminal
Ribosomal_L15e	PF00827.12	gi|449066644|ref|YP_007433726.1|	-	2.2e-75	252.4	10.2	2.2e-75	252.4	7.1	1.6	1	1	1	2	2	2	1	Ribosomal	L15
DUF2992	PF11208.3	gi|449066644|ref|YP_007433726.1|	-	0.003	17.4	0.3	0.0058	16.5	0.2	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2992)
MMR_HSR1_C	PF08438.5	gi|449066645|ref|YP_007433727.1|	-	9.2e-36	122.3	1.6	1.3e-35	121.8	0.3	1.9	2	0	0	2	2	2	1	GTPase	of	unknown	function	C-terminal
MMR_HSR1	PF01926.18	gi|449066645|ref|YP_007433727.1|	-	7.9e-19	67.7	0.1	5.1e-18	65.1	0.1	2.5	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
TGS	PF02824.16	gi|449066645|ref|YP_007433727.1|	-	5.7e-12	45.2	0.1	1.2e-11	44.2	0.0	1.6	1	0	0	1	1	1	1	TGS	domain
FeoB_N	PF02421.13	gi|449066645|ref|YP_007433727.1|	-	1.1e-07	31.2	0.2	0.00014	21.1	0.1	3.2	3	0	0	3	3	3	2	Ferrous	iron	transport	protein	B
Miro	PF08477.8	gi|449066645|ref|YP_007433727.1|	-	0.065	13.7	0.2	2.4	8.6	0.0	3.1	3	1	0	3	3	3	0	Miro-like	protein
YchF-GTPase_C	PF06071.8	gi|449066645|ref|YP_007433727.1|	-	0.069	12.9	0.1	0.6	9.9	0.1	2.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF933)
AAA_29	PF13555.1	gi|449066645|ref|YP_007433727.1|	-	0.13	11.8	0.1	0.56	9.7	0.0	2.1	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
NTP_transferase	PF00483.18	gi|449066646|ref|YP_007433728.1|	-	8.4e-38	130.0	0.0	1.1e-37	129.6	0.0	1.2	1	0	0	1	1	1	1	Nucleotidyl	transferase
Hexapep	PF00132.19	gi|449066646|ref|YP_007433728.1|	-	9.8e-26	88.1	15.2	5.8e-08	31.8	0.1	4.9	2	1	3	5	5	5	5	Bacterial	transferase	hexapeptide	(six	repeats)
NTP_transf_3	PF12804.2	gi|449066646|ref|YP_007433728.1|	-	1.2e-14	54.6	0.0	1.7e-14	54.2	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep_2	PF14602.1	gi|449066646|ref|YP_007433728.1|	-	3.7e-08	32.7	10.0	0.0018	17.8	0.7	4.2	4	1	1	5	5	5	3	Hexapeptide	repeat	of	succinyl-transferase
IspD	PF01128.14	gi|449066646|ref|YP_007433728.1|	-	5.9e-07	29.2	0.0	1.2e-06	28.2	0.0	1.6	1	1	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
Ribosomal_S3Ae	PF01015.13	gi|449066647|ref|YP_007433729.1|	-	1.6e-73	246.2	2.4	1.7e-73	246.1	1.7	1.0	1	0	0	1	1	1	1	Ribosomal	S3Ae	family
SpoU_methylase	PF00588.14	gi|449066648|ref|YP_007433730.1|	-	3.8e-28	98.1	0.0	5.5e-28	97.6	0.0	1.2	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
Methyltrn_RNA_4	PF09936.4	gi|449066648|ref|YP_007433730.1|	-	0.0023	17.4	0.0	0.052	13.0	0.0	2.2	1	1	0	1	1	1	1	SAM-dependent	RNA	methyltransferase
Methyltransf_26	PF13659.1	gi|449066649|ref|YP_007433731.1|	-	1e-13	51.3	0.0	1.3e-13	50.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|449066649|ref|YP_007433731.1|	-	1.5e-13	50.4	0.0	1.9e-13	50.1	0.0	1.2	1	1	0	1	1	1	1	Methyltransferase	small	domain
PrmA	PF06325.8	gi|449066649|ref|YP_007433731.1|	-	4.8e-12	45.6	0.1	6.4e-12	45.1	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_31	PF13847.1	gi|449066649|ref|YP_007433731.1|	-	1.6e-06	27.7	0.0	1.9e-06	27.5	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Met_10	PF02475.11	gi|449066649|ref|YP_007433731.1|	-	2.1e-05	24.1	0.0	2.2e-05	24.1	0.0	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
Cons_hypoth95	PF03602.10	gi|449066649|ref|YP_007433731.1|	-	8.3e-05	22.0	0.0	0.00013	21.4	0.0	1.2	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltransf_18	PF12847.2	gi|449066649|ref|YP_007433731.1|	-	0.00012	22.6	0.0	0.00016	22.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|449066649|ref|YP_007433731.1|	-	0.00022	20.9	0.0	0.00031	20.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
FtsJ	PF01728.14	gi|449066649|ref|YP_007433731.1|	-	0.00042	20.3	0.0	0.00049	20.1	0.0	1.2	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
RrnaAD	PF00398.15	gi|449066649|ref|YP_007433731.1|	-	0.0014	17.7	0.0	0.0021	17.1	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
PCMT	PF01135.14	gi|449066649|ref|YP_007433731.1|	-	0.0017	17.9	0.0	0.0024	17.4	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
CMAS	PF02353.15	gi|449066649|ref|YP_007433731.1|	-	0.005	15.9	0.0	0.0066	15.5	0.0	1.1	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_11	PF08241.7	gi|449066649|ref|YP_007433731.1|	-	0.0067	16.8	0.0	0.011	16.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
N6_Mtase	PF02384.11	gi|449066649|ref|YP_007433731.1|	-	0.0073	15.4	0.1	0.067	12.2	0.0	2.0	1	1	0	1	1	1	1	N-6	DNA	Methylase
DUF3419	PF11899.3	gi|449066649|ref|YP_007433731.1|	-	0.0079	14.9	0.0	0.012	14.3	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3419)
Methyltransf_12	PF08242.7	gi|449066649|ref|YP_007433731.1|	-	0.023	15.1	0.0	0.037	14.5	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
MetW	PF07021.7	gi|449066649|ref|YP_007433731.1|	-	0.051	12.9	0.0	0.074	12.4	0.0	1.3	1	0	0	1	1	1	0	Methionine	biosynthesis	protein	MetW
Methyltransf_32	PF13679.1	gi|449066649|ref|YP_007433731.1|	-	0.055	13.1	0.0	0.086	12.5	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|449066649|ref|YP_007433731.1|	-	0.072	13.4	0.0	0.11	12.9	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
MethyltransfD12	PF02086.10	gi|449066649|ref|YP_007433731.1|	-	0.084	12.3	0.0	0.25	10.7	0.0	1.7	1	1	1	2	2	2	0	D12	class	N6	adenine-specific	DNA	methyltransferase
Methyltransf_3	PF01596.12	gi|449066649|ref|YP_007433731.1|	-	0.1	11.6	0.0	0.16	11.0	0.0	1.2	1	0	0	1	1	1	0	O-methyltransferase
DOT1	PF08123.8	gi|449066649|ref|YP_007433731.1|	-	0.1	11.8	0.0	0.16	11.2	0.0	1.2	1	0	0	1	1	1	0	Histone	methylation	protein	DOT1
RrnaAD	PF00398.15	gi|449066650|ref|YP_007433732.1|	-	8.6e-25	87.2	0.1	1.1e-24	86.9	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Glucan_synthase	PF02364.10	gi|449066650|ref|YP_007433732.1|	-	0.028	12.3	0.0	0.034	12.0	0.0	1.1	1	0	0	1	1	1	0	1,3-beta-glucan	synthase	component
DUF655	PF04919.7	gi|449066651|ref|YP_007433733.1|	-	5.5e-58	195.6	3.7	6.7e-58	195.3	2.6	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF655)
HHH_6	PF14579.1	gi|449066651|ref|YP_007433733.1|	-	0.071	13.1	0.0	0.16	12.0	0.0	1.6	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
RNA_pol_Rpb4	PF03874.11	gi|449066652|ref|YP_007433734.1|	-	5.7e-13	48.9	1.7	6.4e-13	48.7	1.2	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb4
HTH_40	PF14493.1	gi|449066652|ref|YP_007433734.1|	-	0.0045	17.1	2.6	0.033	14.4	0.2	2.1	2	0	0	2	2	2	1	Helix-turn-helix	domain
DUF1160	PF06648.6	gi|449066652|ref|YP_007433734.1|	-	0.0055	16.4	1.3	0.026	14.3	0.1	2.1	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF1160)
HTH_36	PF13730.1	gi|449066652|ref|YP_007433734.1|	-	0.0063	16.6	0.3	0.67	10.1	0.0	2.7	2	0	0	2	2	2	1	Helix-turn-helix	domain
Arch_fla_DE	PF04659.8	gi|449066652|ref|YP_007433734.1|	-	0.011	15.5	0.0	0.015	15.0	0.0	1.3	1	0	0	1	1	1	0	Archaeal	flagella	protein
RIH_assoc	PF08454.6	gi|449066652|ref|YP_007433734.1|	-	0.02	14.5	0.2	0.048	13.3	0.0	1.7	1	1	1	2	2	2	0	RyR	and	IP3R	Homology	associated
DUF1512	PF07431.7	gi|449066652|ref|YP_007433734.1|	-	0.033	12.9	0.2	0.035	12.8	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1512)
RVP	PF00077.15	gi|449066652|ref|YP_007433734.1|	-	0.086	12.7	0.0	0.11	12.4	0.0	1.4	1	1	0	1	1	1	0	Retroviral	aspartyl	protease
NAF	PF03822.9	gi|449066652|ref|YP_007433734.1|	-	0.19	11.4	0.6	0.99	9.1	0.0	2.2	2	0	0	2	2	2	0	NAF	domain
Ribosomal_L21e	PF01157.13	gi|449066653|ref|YP_007433735.1|	-	4.5e-27	93.7	1.5	5e-27	93.5	1.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L21e
Imm17	PF15591.1	gi|449066653|ref|YP_007433735.1|	-	0.085	12.6	0.1	0.12	12.1	0.0	1.4	1	0	0	1	1	1	0	Immunity	protein	17
SSV1_ORF_D-335	PF07935.6	gi|449066654|ref|YP_007433736.1|	-	9.2e-27	92.5	0.5	1.1e-26	92.3	0.3	1.0	1	0	0	1	1	1	1	ORF	D-335-like	protein
DUF3647	PF12363.3	gi|449066655|ref|YP_007433737.1|	-	0.054	13.5	0.6	0.15	12.1	0.4	1.8	1	0	0	1	1	1	0	Phage	protein
HGTP_anticodon	PF03129.15	gi|449066655|ref|YP_007433737.1|	-	0.12	12.3	1.9	0.87	9.5	0.6	2.3	2	0	0	2	2	2	0	Anticodon	binding	domain
tRNA-synt_1d	PF00750.14	gi|449066655|ref|YP_007433737.1|	-	0.14	10.9	0.2	0.23	10.2	0.1	1.3	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(R)
CppA_N	PF14506.1	gi|449066656|ref|YP_007433738.1|	-	0.024	14.3	0.0	0.032	13.9	0.0	1.2	1	0	0	1	1	1	0	CppA	N-terminal
WhiA_N	PF10298.4	gi|449066656|ref|YP_007433738.1|	-	0.13	12.1	0.0	0.2	11.5	0.0	1.3	1	0	0	1	1	1	0	WhiA	N-terminal	LAGLIDADG-like	domain
Replicase	PF03090.12	gi|449066657|ref|YP_007433739.1|	-	0.086	12.7	0.0	0.13	12.1	0.0	1.3	1	0	0	1	1	1	0	Replicase	family
Prim-Pol	PF09250.6	gi|449066657|ref|YP_007433739.1|	-	0.11	12.4	0.0	0.17	11.8	0.0	1.2	1	0	0	1	1	1	0	Bifunctional	DNA	primase/polymerase,	N-terminal
LmjF365940-deam	PF14421.1	gi|449066658|ref|YP_007433740.1|	-	0.0057	16.0	0.0	0.01	15.2	0.0	1.3	1	0	0	1	1	1	1	A	distinct	subfamily	of	CDD/CDA-like	deaminases
Cache_2	PF08269.6	gi|449066658|ref|YP_007433740.1|	-	0.11	12.4	0.4	0.28	11.1	0.2	1.7	1	0	0	1	1	1	0	Cache	domain
Resolvase	PF00239.16	gi|449066660|ref|YP_007433742.1|	-	4.3e-36	123.8	0.0	5.7e-36	123.4	0.0	1.2	1	0	0	1	1	1	1	Resolvase,	N	terminal	domain
Sigma70_r4	PF04545.11	gi|449066661|ref|YP_007433743.1|	-	0.0082	15.4	0.0	0.018	14.3	0.0	1.6	1	0	0	1	1	1	1	Sigma-70,	region	4
Mga	PF05043.8	gi|449066661|ref|YP_007433743.1|	-	0.012	15.8	0.2	0.64	10.3	0.0	2.2	2	0	0	2	2	2	0	Mga	helix-turn-helix	domain
HTH_38	PF13936.1	gi|449066661|ref|YP_007433743.1|	-	0.015	14.8	0.0	0.047	13.2	0.0	1.9	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_17	PF12728.2	gi|449066661|ref|YP_007433743.1|	-	0.015	15.5	0.0	0.026	14.7	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_22	PF13309.1	gi|449066661|ref|YP_007433743.1|	-	0.022	14.5	0.8	0.13	12.0	0.0	2.4	2	1	1	3	3	3	0	HTH	domain
HTH_7	PF02796.10	gi|449066661|ref|YP_007433743.1|	-	0.027	14.3	0.0	0.055	13.3	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	resolvase
HTH_11	PF08279.7	gi|449066661|ref|YP_007433743.1|	-	0.038	13.6	0.3	0.078	12.6	0.0	1.7	2	0	0	2	2	2	0	HTH	domain
HTH_23	PF13384.1	gi|449066661|ref|YP_007433743.1|	-	0.041	13.5	0.0	0.18	11.5	0.0	1.9	2	0	0	2	2	2	0	Homeodomain-like	domain
HTH_28	PF13518.1	gi|449066661|ref|YP_007433743.1|	-	0.051	13.5	0.0	0.083	12.9	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_3	PF01381.17	gi|449066661|ref|YP_007433743.1|	-	0.059	13.2	0.0	0.1	12.4	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix
DUF2089	PF09862.4	gi|449066661|ref|YP_007433743.1|	-	0.1	12.3	0.1	1.6	8.5	0.0	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2089)
HTH_Tnp_1	PF01527.15	gi|449066661|ref|YP_007433743.1|	-	0.11	12.4	0.0	0.17	11.8	0.0	1.6	1	1	0	1	1	1	0	Transposase
DUF4455	PF14643.1	gi|449066662|ref|YP_007433744.1|	-	0.00059	18.6	0.1	0.00066	18.4	0.1	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4455)
Phage_integrase	PF00589.17	gi|449066663|ref|YP_007433745.1|	-	2.2e-14	53.5	0.1	3.3e-13	49.6	0.0	2.6	2	1	0	2	2	2	1	Phage	integrase	family
Phage_int_SAM_4	PF13495.1	gi|449066663|ref|YP_007433745.1|	-	0.00034	20.8	0.3	0.019	15.2	0.0	3.5	2	1	1	3	3	3	1	Phage	integrase,	N-terminal	SAM-like	domain
Radical_SAM	PF04055.16	gi|449066663|ref|YP_007433745.1|	-	0.16	12.1	2.1	5.8	7.0	0.1	3.0	2	2	0	2	2	2	0	Radical	SAM	superfamily
Arch_ATPase	PF01637.13	gi|449066663|ref|YP_007433745.1|	-	0.59	9.7	7.1	0.065	12.9	0.5	2.5	3	1	0	3	3	3	0	Archaeal	ATPase
Beta-Casp	PF10996.3	gi|449066664|ref|YP_007433746.1|	-	1.2e-33	115.7	0.0	2.4e-33	114.7	0.0	1.5	1	0	0	1	1	1	1	Beta-Casp	domain
Lactamase_B	PF00753.22	gi|449066664|ref|YP_007433746.1|	-	3.1e-25	88.9	1.3	5.9e-25	88.0	0.9	1.5	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
RMMBL	PF07521.7	gi|449066664|ref|YP_007433746.1|	-	4.5e-13	48.7	0.1	6.6e-12	45.0	0.0	2.7	3	0	0	3	3	3	1	RNA-metabolising	metallo-beta-lactamase
Lactamase_B_2	PF12706.2	gi|449066664|ref|YP_007433746.1|	-	1.3e-12	47.6	0.1	6.4e-12	45.4	0.1	2.0	2	0	0	2	2	2	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|449066664|ref|YP_007433746.1|	-	4.3e-05	23.2	0.6	0.00015	21.5	0.0	2.2	2	1	0	2	2	2	1	Beta-lactamase	superfamily	domain
KH_2	PF07650.12	gi|449066664|ref|YP_007433746.1|	-	0.00019	20.9	10.3	0.0047	16.4	0.9	3.1	2	1	1	3	3	3	2	KH	domain
KH_1	PF00013.24	gi|449066664|ref|YP_007433746.1|	-	0.0038	16.8	0.0	0.0038	16.8	0.0	2.7	3	0	0	3	3	3	1	KH	domain
A-2_8-polyST	PF07388.6	gi|449066664|ref|YP_007433746.1|	-	0.01	14.2	0.8	0.03	12.7	0.8	1.5	2	0	0	2	2	2	0	Alpha-2,8-polysialyltransferase	(POLYST)
KH_4	PF13083.1	gi|449066664|ref|YP_007433746.1|	-	0.08	12.5	1.0	0.24	11.0	0.7	1.9	1	0	0	1	1	1	0	KH	domain
Fe-ADH_2	PF13685.1	gi|449066665|ref|YP_007433747.1|	-	1.4e-61	208.0	0.0	1.6e-61	207.7	0.0	1.1	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH	PF00465.14	gi|449066665|ref|YP_007433747.1|	-	2e-25	89.2	0.1	8.9e-25	87.0	0.0	1.7	1	1	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
DHQ_synthase	PF01761.15	gi|449066665|ref|YP_007433747.1|	-	1.4e-11	43.8	0.1	1.4e-10	40.5	0.1	2.2	1	1	0	1	1	1	1	3-dehydroquinate	synthase
FKBP_C	PF00254.23	gi|449066666|ref|YP_007433748.1|	-	1.2e-16	60.4	1.2	4e-16	58.8	0.8	2.0	1	1	0	1	1	1	1	FKBP-type	peptidyl-prolyl	cis-trans	isomerase
Ribosomal_L37e	PF01907.14	gi|449066667|ref|YP_007433749.1|	-	1.4e-27	95.2	10.1	1.5e-27	95.1	7.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L37e
DZR	PF12773.2	gi|449066667|ref|YP_007433749.1|	-	0.0053	16.5	1.2	0.0061	16.3	0.8	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
HypA	PF01155.14	gi|449066667|ref|YP_007433749.1|	-	0.018	14.7	0.4	0.019	14.6	0.2	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
GCC2_GCC3	PF07699.8	gi|449066667|ref|YP_007433749.1|	-	0.02	14.4	1.3	0.025	14.1	0.9	1.3	1	0	0	1	1	1	0	GCC2	and	GCC3
Stc1	PF12898.2	gi|449066667|ref|YP_007433749.1|	-	0.021	14.8	0.5	0.023	14.7	0.3	1.1	1	0	0	1	1	1	0	Stc1	domain
FYVE_2	PF02318.11	gi|449066667|ref|YP_007433749.1|	-	0.14	12.0	1.4	0.15	11.9	1.0	1.0	1	0	0	1	1	1	0	FYVE-type	zinc	finger
zf-C3HC4	PF00097.20	gi|449066667|ref|YP_007433749.1|	-	0.25	11.0	2.1	0.38	10.4	1.4	1.3	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
zf-ribbon_3	PF13248.1	gi|449066667|ref|YP_007433749.1|	-	0.58	9.4	5.5	6.6	6.0	3.8	2.1	1	1	0	1	1	1	0	zinc-ribbon	domain
Ribosomal_L32p	PF01783.18	gi|449066667|ref|YP_007433749.1|	-	0.65	10.2	5.3	1.1	9.5	2.7	1.8	1	1	1	2	2	2	0	Ribosomal	L32p	protein	family
DNA_RNApol_7kD	PF03604.8	gi|449066667|ref|YP_007433749.1|	-	1.1	8.7	5.6	0.57	9.7	0.3	2.2	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
DUF35_N	PF12172.3	gi|449066667|ref|YP_007433749.1|	-	2.1	8.3	5.6	3.6	7.6	3.9	1.3	1	0	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Spermine_synth	PF01564.12	gi|449066668|ref|YP_007433750.1|	-	7.3e-59	198.6	0.0	9.2e-59	198.3	0.0	1.1	1	0	0	1	1	1	1	Spermine/spermidine	synthase
Methyltransf_31	PF13847.1	gi|449066668|ref|YP_007433750.1|	-	3.2e-05	23.5	0.0	4.3e-05	23.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|449066668|ref|YP_007433750.1|	-	3.5e-05	24.3	0.0	6e-05	23.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|449066668|ref|YP_007433750.1|	-	0.0001	21.7	0.0	0.00015	21.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_30	PF05430.6	gi|449066668|ref|YP_007433750.1|	-	0.0003	20.4	0.0	0.00053	19.6	0.0	1.4	1	0	0	1	1	1	1	S-adenosyl-L-methionine-dependent	methyltransferase
Methyltransf_26	PF13659.1	gi|449066668|ref|YP_007433750.1|	-	0.0008	19.4	0.0	0.0012	18.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|449066668|ref|YP_007433750.1|	-	0.0042	17.5	0.0	0.0078	16.6	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|449066668|ref|YP_007433750.1|	-	0.0045	16.0	0.0	0.007	15.4	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_25	PF13649.1	gi|449066668|ref|YP_007433750.1|	-	0.0057	17.0	0.0	0.015	15.6	0.0	1.9	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|449066668|ref|YP_007433750.1|	-	0.019	15.4	0.0	0.033	14.6	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
AAA_31	PF13614.1	gi|449066668|ref|YP_007433750.1|	-	0.082	12.8	0.0	0.14	12.0	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Methyltransf_2	PF00891.13	gi|449066668|ref|YP_007433750.1|	-	0.094	11.8	0.0	0.14	11.2	0.0	1.3	1	0	0	1	1	1	0	O-methyltransferase
AdoHcyase	PF05221.12	gi|449066669|ref|YP_007433751.1|	-	8.7e-75	251.1	0.1	9.7e-75	250.9	0.1	1.0	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase
AdoHcyase_NAD	PF00670.16	gi|449066669|ref|YP_007433751.1|	-	5.5e-55	185.6	1.1	1.1e-54	184.7	0.8	1.5	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.14	gi|449066669|ref|YP_007433751.1|	-	3.5e-08	32.7	0.2	7.9e-08	31.6	0.1	1.5	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
IlvN	PF07991.7	gi|449066669|ref|YP_007433751.1|	-	1.1e-05	24.9	0.1	2e-05	24.0	0.1	1.4	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
THF_DHG_CYH_C	PF02882.14	gi|449066669|ref|YP_007433751.1|	-	0.00043	19.3	0.2	0.0034	16.4	0.2	2.1	1	1	0	1	1	1	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
TrkA_N	PF02254.13	gi|449066669|ref|YP_007433751.1|	-	0.00075	19.4	0.0	0.0018	18.2	0.0	1.7	1	0	0	1	1	1	1	TrkA-N	domain
AlaDh_PNT_C	PF01262.16	gi|449066669|ref|YP_007433751.1|	-	0.00088	18.8	0.7	0.013	15.0	0.2	2.3	1	1	1	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
3HCDH_N	PF02737.13	gi|449066669|ref|YP_007433751.1|	-	0.013	15.1	0.3	0.027	14.1	0.2	1.5	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.12	gi|449066669|ref|YP_007433751.1|	-	0.021	15.2	0.1	0.05	14.0	0.1	1.6	1	0	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
Pyr_redox	PF00070.22	gi|449066669|ref|YP_007433751.1|	-	0.099	13.0	1.2	0.22	11.9	0.1	2.2	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.9	gi|449066669|ref|YP_007433751.1|	-	0.15	11.9	0.6	0.41	10.5	0.2	1.7	1	1	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
MS_channel	PF00924.13	gi|449066670|ref|YP_007433752.1|	-	3.3e-17	62.5	9.8	3.3e-17	62.5	6.8	2.0	2	0	0	2	2	2	1	Mechanosensitive	ion	channel
DUF4117	PF13491.1	gi|449066670|ref|YP_007433752.1|	-	2.8	7.3	12.7	0.64	9.4	5.3	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4117)
Gly-zipper_OmpA	PF13436.1	gi|449066670|ref|YP_007433752.1|	-	3.5	7.3	8.7	5.2	6.7	6.0	1.2	1	0	0	1	1	1	0	Glycine-zipper	containing	OmpA-like	membrane	domain
FtsX	PF02687.16	gi|449066670|ref|YP_007433752.1|	-	5.2	6.8	19.1	4.2	7.1	3.3	2.6	1	1	2	3	3	3	0	FtsX-like	permease	family
DUF2122	PF09895.4	gi|449066671|ref|YP_007433753.1|	-	5.8e-36	122.9	0.1	7.8e-36	122.4	0.1	1.2	1	0	0	1	1	1	1	RecB-family	nuclease	(DUF2122)
DNA_methylase	PF00145.12	gi|449066672|ref|YP_007433754.1|	-	1.1e-51	176.0	0.0	1.3e-37	129.7	0.0	2.0	1	1	1	2	2	2	2	C-5	cytosine-specific	DNA	methylase
Methyltransf_26	PF13659.1	gi|449066672|ref|YP_007433754.1|	-	0.00035	20.5	0.0	0.00055	19.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|449066672|ref|YP_007433754.1|	-	0.0052	16.3	0.0	0.0091	15.5	0.0	1.3	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
TFIIE_alpha	PF02002.12	gi|449066673|ref|YP_007433755.1|	-	9e-22	76.5	6.2	9e-22	76.5	4.3	2.0	2	0	0	2	2	2	1	TFIIE	alpha	subunit
Rrf2	PF02082.15	gi|449066673|ref|YP_007433755.1|	-	0.00028	20.9	0.0	0.00043	20.3	0.0	1.4	1	0	0	1	1	1	1	Transcriptional	regulator
Sigma70_r3	PF04539.11	gi|449066673|ref|YP_007433755.1|	-	0.00054	19.8	0.6	0.0024	17.7	0.0	2.1	2	0	0	2	2	2	1	Sigma-70	region	3
HTH_9	PF08221.6	gi|449066673|ref|YP_007433755.1|	-	0.0019	17.9	0.0	0.0059	16.4	0.0	1.8	2	0	0	2	2	2	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|449066673|ref|YP_007433755.1|	-	0.002	17.9	0.0	0.0038	17.1	0.0	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Phage_rep_org_N	PF09681.5	gi|449066673|ref|YP_007433755.1|	-	0.0031	17.0	0.3	0.017	14.6	0.0	2.0	2	0	0	2	2	2	1	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
HTH_20	PF12840.2	gi|449066673|ref|YP_007433755.1|	-	0.0062	16.3	0.0	0.011	15.5	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|449066673|ref|YP_007433755.1|	-	0.0086	15.7	1.6	0.0095	15.6	0.2	1.8	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.5	gi|449066673|ref|YP_007433755.1|	-	0.025	14.1	0.0	0.036	13.6	0.0	1.2	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_24	PF13412.1	gi|449066673|ref|YP_007433755.1|	-	0.032	13.6	0.1	0.062	12.7	0.1	1.5	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
DUF2316	PF10078.4	gi|449066673|ref|YP_007433755.1|	-	0.036	14.0	0.0	0.19	11.7	0.0	2.0	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2316)
HrcA_DNA-bdg	PF03444.10	gi|449066673|ref|YP_007433755.1|	-	0.081	12.3	0.2	0.59	9.6	0.0	2.2	2	0	0	2	2	2	0	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
IF2_N	PF04760.10	gi|449066673|ref|YP_007433755.1|	-	0.089	12.4	0.1	0.3	10.7	0.0	1.9	1	0	0	1	1	1	0	Translation	initiation	factor	IF-2,	N-terminal	region
Phage_terminase	PF10668.4	gi|449066673|ref|YP_007433755.1|	-	0.11	12.2	0.0	0.35	10.6	0.0	1.8	1	0	0	1	1	1	0	Phage	terminase	small	subunit
Enkurin	PF13864.1	gi|449066673|ref|YP_007433755.1|	-	0.16	12.1	5.8	2	8.7	0.3	2.5	2	1	0	2	2	2	0	Calmodulin-binding
Trm56	PF01994.11	gi|449066674|ref|YP_007433756.1|	-	3.2e-49	165.7	0.1	3.6e-49	165.5	0.1	1.0	1	0	0	1	1	1	1	tRNA	ribose	2'-O-methyltransferase,	aTrm56
MMR_HSR1	PF01926.18	gi|449066675|ref|YP_007433757.1|	-	1.7e-19	69.8	1.0	2.8e-19	69.1	0.1	1.8	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.13	gi|449066675|ref|YP_007433757.1|	-	3.3e-10	39.4	0.5	9.6e-10	37.9	0.3	1.8	1	1	0	1	1	1	1	Ferrous	iron	transport	protein	B
GTP_EFTU	PF00009.22	gi|449066675|ref|YP_007433757.1|	-	7.9e-09	35.2	1.7	1.1e-05	24.9	0.1	2.3	2	0	0	2	2	2	2	Elongation	factor	Tu	GTP	binding	domain
SRPRB	PF09439.5	gi|449066675|ref|YP_007433757.1|	-	1.5e-06	27.5	0.3	3.2e-06	26.4	0.1	1.7	1	1	0	1	1	1	1	Signal	recognition	particle	receptor	beta	subunit
Miro	PF08477.8	gi|449066675|ref|YP_007433757.1|	-	6.7e-06	26.6	0.0	2.3e-05	24.8	0.0	1.9	1	0	0	1	1	1	1	Miro-like	protein
GTP-bdg_N	PF13167.1	gi|449066675|ref|YP_007433757.1|	-	3.1e-05	24.0	0.2	7.3e-05	22.8	0.1	1.6	1	0	0	1	1	1	1	GTP-binding	GTPase	N-terminal
ABC_tran	PF00005.22	gi|449066675|ref|YP_007433757.1|	-	0.00079	19.7	0.4	0.002	18.4	0.1	1.8	1	1	1	2	2	2	1	ABC	transporter
Arf	PF00025.16	gi|449066675|ref|YP_007433757.1|	-	0.0014	17.9	2.7	0.0088	15.3	1.6	2.4	1	1	0	1	1	1	1	ADP-ribosylation	factor	family
Dynamin_N	PF00350.18	gi|449066675|ref|YP_007433757.1|	-	0.0081	15.9	2.1	0.26	11.0	0.1	2.6	2	1	1	3	3	2	1	Dynamin	family
AAA_23	PF13476.1	gi|449066675|ref|YP_007433757.1|	-	0.0095	16.2	4.5	0.0095	16.2	3.1	2.3	1	1	1	2	2	2	1	AAA	domain
AAA_29	PF13555.1	gi|449066675|ref|YP_007433757.1|	-	0.015	14.8	0.0	0.029	13.8	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
ATP_bind_1	PF03029.12	gi|449066675|ref|YP_007433757.1|	-	0.015	14.8	1.8	0.27	10.7	0.1	2.3	1	1	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
DUF1433	PF07252.6	gi|449066675|ref|YP_007433757.1|	-	0.017	15.3	0.1	0.05	13.8	0.1	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1433)
DUF258	PF03193.11	gi|449066675|ref|YP_007433757.1|	-	0.027	13.6	0.1	0.046	12.9	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_14	PF13173.1	gi|449066675|ref|YP_007433757.1|	-	0.028	14.3	0.7	0.099	12.5	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
Spore_IV_A	PF09547.5	gi|449066675|ref|YP_007433757.1|	-	0.028	13.1	1.9	0.82	8.2	0.0	2.6	2	1	1	3	3	3	0	Stage	IV	sporulation	protein	A	(spore_IV_A)
MobB	PF03205.9	gi|449066675|ref|YP_007433757.1|	-	0.066	12.9	0.3	0.19	11.4	0.2	1.8	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
PduV-EutP	PF10662.4	gi|449066675|ref|YP_007433757.1|	-	0.07	12.6	1.5	0.7	9.3	0.2	2.3	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
cobW	PF02492.14	gi|449066675|ref|YP_007433757.1|	-	0.2	11.0	4.9	2.5	7.5	0.2	2.7	1	1	1	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
DUF2762	PF10960.3	gi|449066675|ref|YP_007433757.1|	-	1.4	8.6	5.4	7	6.4	0.3	3.0	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2762)
HTH_3	PF01381.17	gi|449066676|ref|YP_007433758.1|	-	2e-11	43.5	2.9	3.7e-11	42.7	2.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.2	gi|449066676|ref|YP_007433758.1|	-	6.3e-10	38.9	2.4	2.6e-09	36.9	1.0	2.3	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_31	PF13560.1	gi|449066676|ref|YP_007433758.1|	-	1.6e-09	37.8	0.0	2.5e-09	37.2	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_25	PF13413.1	gi|449066676|ref|YP_007433758.1|	-	3.1e-07	29.9	1.4	6.5e-06	25.6	0.6	2.5	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_37	PF13744.1	gi|449066676|ref|YP_007433758.1|	-	0.001	18.8	0.4	0.0018	18.0	0.3	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
NMD3	PF04981.8	gi|449066676|ref|YP_007433758.1|	-	0.0048	16.0	2.0	0.0065	15.6	1.2	1.3	1	1	0	1	1	1	1	NMD3	family
HTH_23	PF13384.1	gi|449066676|ref|YP_007433758.1|	-	0.005	16.4	0.4	0.015	14.8	0.2	1.9	1	1	0	1	1	1	1	Homeodomain-like	domain
DUF4428	PF14471.1	gi|449066676|ref|YP_007433758.1|	-	0.011	15.4	4.6	0.027	14.2	3.2	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4428)
DUF4559	PF15112.1	gi|449066676|ref|YP_007433758.1|	-	0.014	14.5	1.9	0.016	14.3	1.3	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4559)
HTH_6	PF01418.12	gi|449066676|ref|YP_007433758.1|	-	0.04	13.6	0.1	0.076	12.7	0.1	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain,	rpiR	family
DZR	PF12773.2	gi|449066676|ref|YP_007433758.1|	-	0.05	13.4	0.5	0.094	12.5	0.3	1.5	1	1	0	1	1	1	0	Double	zinc	ribbon
HTH_1	PF00126.22	gi|449066676|ref|YP_007433758.1|	-	0.093	12.4	1.1	8.8	6.1	0.0	2.2	2	0	0	2	2	2	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
IF-2B	PF01008.12	gi|449066676|ref|YP_007433758.1|	-	0.1	11.5	1.6	0.13	11.1	1.1	1.1	1	0	0	1	1	1	0	Initiation	factor	2	subunit	family
HTH_11	PF08279.7	gi|449066676|ref|YP_007433758.1|	-	0.13	11.9	0.6	0.39	10.3	0.1	2.0	2	0	0	2	2	2	0	HTH	domain
Relaxase	PF03432.9	gi|449066676|ref|YP_007433758.1|	-	0.14	11.5	3.9	0.19	11.1	2.7	1.1	1	0	0	1	1	1	0	Relaxase/Mobilisation	nuclease	domain
OEP	PF02321.13	gi|449066676|ref|YP_007433758.1|	-	0.16	11.5	3.3	0.24	10.9	2.3	1.1	1	0	0	1	1	1	0	Outer	membrane	efflux	protein
zf-FCS	PF06467.9	gi|449066676|ref|YP_007433758.1|	-	0.9	9.2	4.3	2.5	7.8	0.1	2.4	1	1	1	2	2	2	0	MYM-type	Zinc	finger	with	FCS	sequence	motif
Zn_ribbon_2	PF12674.2	gi|449066676|ref|YP_007433758.1|	-	4.9	7.5	5.5	11	6.4	1.4	2.2	1	1	1	2	2	2	0	Putative	zinc	ribbon	domain
AAA	PF00004.24	gi|449066677|ref|YP_007433759.1|	-	3.5e-43	146.9	0.1	1.2e-42	145.2	0.0	1.9	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_2	PF07724.9	gi|449066677|ref|YP_007433759.1|	-	5.1e-07	29.7	0.0	1.3e-06	28.4	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
AAA_22	PF13401.1	gi|449066677|ref|YP_007433759.1|	-	2.8e-06	27.5	0.2	0.00011	22.3	0.1	2.9	1	1	1	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|449066677|ref|YP_007433759.1|	-	3.9e-06	26.9	0.1	1.7e-05	24.8	0.0	2.0	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_17	PF13207.1	gi|449066677|ref|YP_007433759.1|	-	6.3e-06	27.0	1.4	5.2e-05	24.0	0.3	2.7	2	1	0	2	2	2	1	AAA	domain
AAA_5	PF07728.9	gi|449066677|ref|YP_007433759.1|	-	7.1e-06	25.8	0.1	4e-05	23.3	0.1	2.2	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
RuvB_N	PF05496.7	gi|449066677|ref|YP_007433759.1|	-	3.1e-05	23.1	0.0	6.5e-05	22.0	0.0	1.5	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
Zeta_toxin	PF06414.7	gi|449066677|ref|YP_007433759.1|	-	0.00012	21.1	0.0	0.00023	20.3	0.0	1.5	1	0	0	1	1	1	1	Zeta	toxin
AAA_28	PF13521.1	gi|449066677|ref|YP_007433759.1|	-	0.00015	21.8	0.0	0.00029	20.8	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
DUF815	PF05673.8	gi|449066677|ref|YP_007433759.1|	-	0.00017	20.6	0.0	0.0003	19.7	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
AAA_14	PF13173.1	gi|449066677|ref|YP_007433759.1|	-	0.00053	19.8	0.1	0.0026	17.6	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
IstB_IS21	PF01695.12	gi|449066677|ref|YP_007433759.1|	-	0.00067	19.1	0.1	0.0018	17.6	0.0	1.7	2	0	0	2	2	1	1	IstB-like	ATP	binding	protein
Mg_chelatase	PF01078.16	gi|449066677|ref|YP_007433759.1|	-	0.00076	18.6	0.4	0.0031	16.7	0.1	2.1	2	1	0	2	2	1	1	Magnesium	chelatase,	subunit	ChlI
AAA_19	PF13245.1	gi|449066677|ref|YP_007433759.1|	-	0.00094	18.8	0.1	0.002	17.8	0.0	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_33	PF13671.1	gi|449066677|ref|YP_007433759.1|	-	0.0011	18.8	0.0	0.0033	17.3	0.0	1.8	2	0	0	2	2	1	1	AAA	domain
AAA_25	PF13481.1	gi|449066677|ref|YP_007433759.1|	-	0.0018	17.6	1.3	0.025	13.9	0.1	2.3	1	1	1	2	2	2	1	AAA	domain
TIP49	PF06068.8	gi|449066677|ref|YP_007433759.1|	-	0.0019	16.9	0.0	0.0041	15.9	0.0	1.5	1	0	0	1	1	1	1	TIP49	C-terminus
AAA_24	PF13479.1	gi|449066677|ref|YP_007433759.1|	-	0.0037	16.8	0.0	0.0077	15.8	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
Sigma54_activat	PF00158.21	gi|449066677|ref|YP_007433759.1|	-	0.0078	15.7	0.0	0.04	13.4	0.0	2.1	2	0	0	2	2	2	1	Sigma-54	interaction	domain
AAA_18	PF13238.1	gi|449066677|ref|YP_007433759.1|	-	0.0087	16.3	0.2	0.049	13.9	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
NACHT	PF05729.7	gi|449066677|ref|YP_007433759.1|	-	0.011	15.3	0.1	0.089	12.4	0.0	2.2	2	0	0	2	2	2	0	NACHT	domain
RNA_helicase	PF00910.17	gi|449066677|ref|YP_007433759.1|	-	0.012	15.7	0.0	0.029	14.5	0.0	1.7	1	0	0	1	1	1	0	RNA	helicase
PhoH	PF02562.11	gi|449066677|ref|YP_007433759.1|	-	0.02	14.1	0.0	0.057	12.6	0.0	1.7	1	0	0	1	1	1	0	PhoH-like	protein
KaiC	PF06745.8	gi|449066677|ref|YP_007433759.1|	-	0.02	14.0	0.4	0.044	12.8	0.0	1.8	2	0	0	2	2	1	0	KaiC
XhlA	PF10779.4	gi|449066677|ref|YP_007433759.1|	-	0.02	14.7	2.8	0.02	14.7	2.0	2.1	2	0	0	2	2	1	0	Haemolysin	XhlA
Arch_ATPase	PF01637.13	gi|449066677|ref|YP_007433759.1|	-	0.026	14.2	0.0	0.026	14.2	0.0	2.8	3	1	0	3	3	2	0	Archaeal	ATPase
Guanylate_kin	PF00625.16	gi|449066677|ref|YP_007433759.1|	-	0.027	13.8	0.3	1.2	8.5	0.0	2.8	2	1	0	3	3	3	0	Guanylate	kinase
Bac_DnaA	PF00308.13	gi|449066677|ref|YP_007433759.1|	-	0.03	13.9	0.0	0.12	12.0	0.0	2.0	2	0	0	2	2	2	0	Bacterial	dnaA	protein
NB-ARC	PF00931.17	gi|449066677|ref|YP_007433759.1|	-	0.038	12.8	0.0	0.075	11.8	0.0	1.6	1	0	0	1	1	1	0	NB-ARC	domain
Prefoldin_2	PF01920.15	gi|449066677|ref|YP_007433759.1|	-	0.038	13.7	1.3	0.12	12.1	0.9	1.8	1	0	0	1	1	1	0	Prefoldin	subunit
Parvo_NS1	PF01057.12	gi|449066677|ref|YP_007433759.1|	-	0.042	12.7	0.0	0.077	11.8	0.0	1.3	1	0	0	1	1	1	0	Parvovirus	non-structural	protein	NS1
ABC_tran	PF00005.22	gi|449066677|ref|YP_007433759.1|	-	0.058	13.6	0.0	0.26	11.5	0.0	2.1	2	0	0	2	2	2	0	ABC	transporter
cobW	PF02492.14	gi|449066677|ref|YP_007433759.1|	-	0.058	12.8	0.0	0.1	12.0	0.0	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
Sigma54_activ_2	PF14532.1	gi|449066677|ref|YP_007433759.1|	-	0.061	13.3	0.0	0.21	11.6	0.0	2.0	1	1	0	1	1	1	0	Sigma-54	interaction	domain
ATP-synt_ab	PF00006.20	gi|449066677|ref|YP_007433759.1|	-	0.089	12.2	0.0	0.14	11.6	0.0	1.3	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
DivIC	PF04977.10	gi|449066677|ref|YP_007433759.1|	-	0.096	12.1	1.3	0.26	10.7	0.2	2.2	2	0	0	2	2	2	0	Septum	formation	initiator
CPT	PF07931.7	gi|449066677|ref|YP_007433759.1|	-	0.1	12.1	0.0	0.2	11.2	0.0	1.4	1	0	0	1	1	1	0	Chloramphenicol	phosphotransferase-like	protein
CENP-F_N	PF10481.4	gi|449066677|ref|YP_007433759.1|	-	0.13	11.6	0.2	0.13	11.6	0.1	1.5	2	0	0	2	2	1	0	Cenp-F	N-terminal	domain
DUF1845	PF08900.6	gi|449066677|ref|YP_007433759.1|	-	0.16	11.2	0.4	16	4.6	0.1	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1845)
AAA_23	PF13476.1	gi|449066677|ref|YP_007433759.1|	-	0.24	11.6	0.0	0.24	11.6	0.0	3.2	3	1	0	3	3	3	0	AAA	domain
DUF1192	PF06698.6	gi|449066677|ref|YP_007433759.1|	-	0.59	9.9	3.2	0.98	9.2	0.2	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1192)
Phage_GP20	PF06810.6	gi|449066677|ref|YP_007433759.1|	-	1.8	7.9	8.3	1	8.7	0.7	2.5	3	0	0	3	3	2	0	Phage	minor	structural	protein	GP20
YvrJ	PF12841.2	gi|449066677|ref|YP_007433759.1|	-	3.6	6.9	6.0	3.6	6.9	0.7	3.1	3	0	0	3	3	3	0	YvrJ	protein	family
PUA	PF01472.15	gi|449066678|ref|YP_007433760.1|	-	2.9e-21	74.9	0.8	4.6e-21	74.3	0.6	1.3	1	0	0	1	1	1	1	PUA	domain
TGT_C2	PF14810.1	gi|449066678|ref|YP_007433760.1|	-	9.9e-08	31.7	0.0	1.9e-07	30.8	0.0	1.5	1	0	0	1	1	1	1	Patch-forming	domain	C2	of	tRNA-guanine	transglycosylase
PAC2	PF09754.4	gi|449066679|ref|YP_007433761.1|	-	4.5e-40	137.8	0.0	5.5e-40	137.5	0.0	1.0	1	0	0	1	1	1	1	PAC2	family
TGT	PF01702.13	gi|449066680|ref|YP_007433762.1|	-	2.3e-47	161.2	0.0	3.3e-47	160.7	0.0	1.2	1	0	0	1	1	1	1	Queuine	tRNA-ribosyltransferase
DUF3912	PF13051.1	gi|449066680|ref|YP_007433762.1|	-	0.089	12.5	0.1	0.31	10.8	0.1	1.9	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3912)
Lsm_C	PF14894.1	gi|449066681|ref|YP_007433763.1|	-	6.8e-30	102.3	0.3	1.1e-29	101.6	0.2	1.4	1	0	0	1	1	1	1	Lsm	C-terminal
LSM	PF01423.17	gi|449066681|ref|YP_007433763.1|	-	0.00077	18.9	0.9	0.002	17.6	0.4	1.9	2	1	0	2	2	2	1	LSM	domain
SM-ATX	PF14438.1	gi|449066681|ref|YP_007433763.1|	-	0.006	16.4	0.0	0.011	15.6	0.0	1.4	1	0	0	1	1	1	1	Ataxin	2	SM	domain
RusA	PF05866.6	gi|449066682|ref|YP_007433764.1|	-	0.12	12.7	0.1	0.16	12.3	0.0	1.2	1	0	0	1	1	1	0	Endodeoxyribonuclease	RusA
Proteasome	PF00227.21	gi|449066683|ref|YP_007433765.1|	-	9.5e-50	168.5	0.2	1.1e-49	168.3	0.2	1.0	1	0	0	1	1	1	1	Proteasome	subunit
tRNA-synt_His	PF13393.1	gi|449066684|ref|YP_007433766.1|	-	4.5e-68	229.5	0.0	5.9e-68	229.2	0.0	1.1	1	0	0	1	1	1	1	Histidyl-tRNA	synthetase
tRNA-synt_2b	PF00587.20	gi|449066684|ref|YP_007433766.1|	-	6.7e-23	81.1	0.3	2.7e-22	79.1	0.1	1.9	2	0	0	2	2	2	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|449066684|ref|YP_007433766.1|	-	1.1e-10	41.3	0.7	3e-10	39.9	0.5	1.8	1	0	0	1	1	1	1	Anticodon	binding	domain
tRNA-synt_2d	PF01409.15	gi|449066684|ref|YP_007433766.1|	-	4e-10	39.3	0.1	4.5e-08	32.5	0.0	2.6	3	0	0	3	3	3	2	tRNA	synthetases	class	II	core	domain	(F)
tRNA_int_endo	PF01974.12	gi|449066685|ref|YP_007433767.1|	-	4.7e-07	29.5	0.3	1.2e-06	28.1	0.2	1.7	1	1	0	1	1	1	1	tRNA	intron	endonuclease,	catalytic	C-terminal	domain
Sen15	PF09631.5	gi|449066685|ref|YP_007433767.1|	-	0.035	14.3	0.1	0.039	14.1	0.1	1.2	1	0	0	1	1	1	0	Sen15	protein
Stk19	PF10494.4	gi|449066685|ref|YP_007433767.1|	-	0.035	13.5	0.6	0.038	13.3	0.4	1.0	1	0	0	1	1	1	0	Serine-threonine	protein	kinase	19
TFIIE_beta	PF02186.10	gi|449066685|ref|YP_007433767.1|	-	0.08	12.9	0.6	0.11	12.4	0.4	1.3	1	0	0	1	1	1	0	TFIIE	beta	subunit	core	domain
Pox_A3L	PF05288.6	gi|449066685|ref|YP_007433767.1|	-	0.098	12.4	0.3	0.15	11.7	0.2	1.3	1	0	0	1	1	1	0	Poxvirus	A3L	Protein
TF_Zn_Ribbon	PF08271.7	gi|449066686|ref|YP_007433768.1|	-	7e-12	44.4	3.4	1.5e-11	43.3	2.3	1.6	1	0	0	1	1	1	1	TFIIB	zinc-binding
Ribosomal_S27e	PF01667.12	gi|449066686|ref|YP_007433768.1|	-	0.021	14.3	1.1	0.04	13.4	0.5	1.6	2	0	0	2	2	2	0	Ribosomal	protein	S27
Zn_Tnp_IS91	PF14319.1	gi|449066686|ref|YP_007433768.1|	-	0.15	11.5	0.8	0.3	10.6	0.5	1.5	1	0	0	1	1	1	0	Transposase	zinc-binding	domain
TFIIS_C	PF01096.13	gi|449066686|ref|YP_007433768.1|	-	0.99	9.0	0.1	0.99	9.0	0.1	2.2	2	1	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
DUF1492	PF07374.6	gi|449066686|ref|YP_007433768.1|	-	1.5	8.9	7.4	0.31	11.1	0.7	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1492)
DUF4065	PF13274.1	gi|449066686|ref|YP_007433768.1|	-	3	8.5	9.2	1.5	9.6	1.1	2.4	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF4065)
Cpn60_TCP1	PF00118.19	gi|449066687|ref|YP_007433769.1|	-	3.5e-165	550.3	13.0	4.1e-165	550.0	9.0	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
DUF87	PF01935.12	gi|449066688|ref|YP_007433770.1|	-	2.1e-37	129.1	1.2	2.1e-37	129.1	0.8	2.2	3	0	0	3	3	3	1	Domain	of	unknown	function	DUF87
AAA_10	PF12846.2	gi|449066688|ref|YP_007433770.1|	-	1.4e-23	83.8	1.0	1.7e-22	80.2	0.7	2.1	1	1	0	1	1	1	1	AAA-like	domain
DUF853	PF05872.7	gi|449066688|ref|YP_007433770.1|	-	4.9e-08	31.7	0.0	0.00084	17.8	0.0	2.1	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
Zot	PF05707.7	gi|449066688|ref|YP_007433770.1|	-	8.9e-08	31.8	0.3	2e-06	27.3	0.0	2.5	3	0	0	3	3	3	1	Zonular	occludens	toxin	(Zot)
TrwB_AAD_bind	PF10412.4	gi|449066688|ref|YP_007433770.1|	-	2e-07	30.0	0.0	6.6e-05	21.6	0.0	2.6	3	0	0	3	3	3	2	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
T4SS-DNA_transf	PF02534.9	gi|449066688|ref|YP_007433770.1|	-	2.4e-07	29.6	0.6	0.0008	18.1	0.0	2.7	3	0	0	3	3	3	2	Type	IV	secretory	system	Conjugative	DNA	transfer
TraG-D_C	PF12696.2	gi|449066688|ref|YP_007433770.1|	-	0.0012	18.7	1.2	0.0042	16.9	0.1	2.2	2	0	0	2	2	2	1	TraM	recognition	site	of	TraD	and	TraG
DEAD	PF00270.24	gi|449066688|ref|YP_007433770.1|	-	0.0025	17.3	0.4	2.8	7.4	0.0	3.2	3	1	0	3	3	3	2	DEAD/DEAH	box	helicase
AAA_22	PF13401.1	gi|449066688|ref|YP_007433770.1|	-	0.0032	17.5	1.1	2.7	8.1	0.0	2.8	2	1	0	2	2	2	2	AAA	domain
AAA_17	PF13207.1	gi|449066688|ref|YP_007433770.1|	-	0.0097	16.7	1.3	0.12	13.2	0.9	2.7	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|449066688|ref|YP_007433770.1|	-	0.02	15.2	2.2	0.037	14.3	0.1	2.5	2	1	0	2	2	2	0	AAA	domain
CbiA	PF01656.18	gi|449066688|ref|YP_007433770.1|	-	0.021	14.2	2.1	0.14	11.5	0.9	2.6	2	1	0	2	2	2	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
IPT	PF01745.11	gi|449066688|ref|YP_007433770.1|	-	0.09	11.9	0.0	0.27	10.3	0.0	1.7	1	0	0	1	1	1	0	Isopentenyl	transferase
Zeta_toxin	PF06414.7	gi|449066688|ref|YP_007433770.1|	-	0.11	11.5	0.0	0.59	9.1	0.0	2.0	2	0	0	2	2	2	0	Zeta	toxin
ResIII	PF04851.10	gi|449066688|ref|YP_007433770.1|	-	1.4	8.6	5.5	2.1	8.1	0.5	2.9	2	1	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
Urm1	PF09138.6	gi|449066690|ref|YP_007433772.1|	-	3.1e-06	27.2	0.3	3.5e-06	27.0	0.2	1.1	1	0	0	1	1	1	1	Urm1	(Ubiquitin	related	modifier)
ThiS	PF02597.15	gi|449066690|ref|YP_007433772.1|	-	7.3e-06	26.3	0.0	7.9e-06	26.2	0.0	1.1	1	0	0	1	1	1	1	ThiS	family
GTP_EFTU_D2	PF03144.20	gi|449066690|ref|YP_007433772.1|	-	0.11	12.6	0.0	0.24	11.5	0.0	1.6	1	1	0	1	1	1	0	Elongation	factor	Tu	domain	2
DNA_pol3_beta	PF00712.14	gi|449066690|ref|YP_007433772.1|	-	0.12	12.2	0.0	0.13	12.2	0.0	1.1	1	0	0	1	1	1	0	DNA	polymerase	III	beta	subunit,	N-terminal	domain
Ribosomal_S17e	PF00833.13	gi|449066691|ref|YP_007433773.1|	-	3.3e-16	59.1	1.1	3.5e-16	59.0	0.7	1.0	1	0	0	1	1	1	1	Ribosomal	S17
LEDGF	PF11467.3	gi|449066691|ref|YP_007433773.1|	-	0.1	12.3	1.0	0.15	11.7	0.2	1.6	1	1	1	2	2	2	0	Lens	epithelium-derived	growth	factor	(LEDGF)
YtxH	PF12732.2	gi|449066691|ref|YP_007433773.1|	-	1.4	9.2	6.1	5	7.5	4.3	1.9	1	1	0	1	1	1	0	YtxH-like	protein
FBPase_3	PF01950.11	gi|449066692|ref|YP_007433774.1|	-	4.1e-182	605.0	0.0	4.7e-182	604.8	0.0	1.0	1	0	0	1	1	1	1	Fructose-1,6-bisphosphatase
ABC_tran	PF00005.22	gi|449066693|ref|YP_007433775.1|	-	1.4e-37	129.0	0.0	3.9e-19	69.3	0.0	2.4	2	0	0	2	2	2	2	ABC	transporter
AAA_21	PF13304.1	gi|449066693|ref|YP_007433775.1|	-	1.6e-12	48.0	14.6	0.00058	19.9	3.9	4.5	3	2	0	4	4	3	3	AAA	domain
RLI	PF04068.10	gi|449066693|ref|YP_007433775.1|	-	1.6e-12	46.7	2.3	3.8e-12	45.5	1.6	1.7	1	0	0	1	1	1	1	Possible	Fer4-like	domain	in	RNase	L	inhibitor,	RLI
SMC_N	PF02463.14	gi|449066693|ref|YP_007433775.1|	-	1e-10	41.2	6.1	0.0017	17.6	1.9	4.2	3	1	0	3	3	3	2	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|449066693|ref|YP_007433775.1|	-	1.1e-08	34.5	4.2	0.0057	15.7	0.8	3.9	4	0	0	4	4	4	3	AAA	ATPase	domain
Fer4	PF00037.22	gi|449066693|ref|YP_007433775.1|	-	3.3e-07	29.6	6.4	3.3e-07	29.6	4.5	2.6	3	0	0	3	3	3	1	4Fe-4S	binding	domain
AAA_17	PF13207.1	gi|449066693|ref|YP_007433775.1|	-	3.1e-06	28.0	3.6	0.0042	17.9	0.1	3.8	2	2	0	2	2	2	1	AAA	domain
AAA_14	PF13173.1	gi|449066693|ref|YP_007433775.1|	-	3.1e-06	27.1	0.7	0.056	13.3	0.0	2.8	2	0	0	2	2	2	2	AAA	domain
AAA_23	PF13476.1	gi|449066693|ref|YP_007433775.1|	-	1.3e-05	25.6	3.6	0.072	13.4	0.2	2.4	2	0	0	2	2	2	2	AAA	domain
MobB	PF03205.9	gi|449066693|ref|YP_007433775.1|	-	1.9e-05	24.3	0.6	0.0055	16.4	0.0	2.8	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Fer4_7	PF12838.2	gi|449066693|ref|YP_007433775.1|	-	5.5e-05	23.4	5.7	0.00024	21.4	4.3	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
AAA_16	PF13191.1	gi|449066693|ref|YP_007433775.1|	-	0.00017	21.6	0.4	0.016	15.2	0.0	2.6	2	2	0	2	2	2	1	AAA	ATPase	domain
Fer4_21	PF14697.1	gi|449066693|ref|YP_007433775.1|	-	0.00027	20.7	8.2	0.00047	19.9	5.7	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|449066693|ref|YP_007433775.1|	-	0.00029	20.5	3.6	0.00029	20.5	2.5	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
AAA_18	PF13238.1	gi|449066693|ref|YP_007433775.1|	-	0.00029	21.1	4.0	0.38	11.0	0.1	3.3	2	2	0	2	2	2	2	AAA	domain
Fer4_6	PF12837.2	gi|449066693|ref|YP_007433775.1|	-	0.0003	20.5	13.8	0.00036	20.2	2.8	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
RNA_helicase	PF00910.17	gi|449066693|ref|YP_007433775.1|	-	0.00048	20.2	0.0	0.17	12.0	0.0	2.5	2	0	0	2	2	2	1	RNA	helicase
Fer4_10	PF13237.1	gi|449066693|ref|YP_007433775.1|	-	0.00098	18.8	2.1	0.00098	18.8	1.4	2.3	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
AAA_29	PF13555.1	gi|449066693|ref|YP_007433775.1|	-	0.0014	18.0	0.9	2	8.0	0.0	2.5	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
MMR_HSR1	PF01926.18	gi|449066693|ref|YP_007433775.1|	-	0.0018	18.2	1.0	1.6	8.7	0.0	3.0	2	1	0	2	2	2	1	50S	ribosome-binding	GTPase
Miro	PF08477.8	gi|449066693|ref|YP_007433775.1|	-	0.002	18.5	0.4	5.6	7.4	0.0	3.1	2	1	0	3	3	2	0	Miro-like	protein
AAA_22	PF13401.1	gi|449066693|ref|YP_007433775.1|	-	0.0022	18.1	0.7	0.034	14.3	0.0	3.0	2	2	1	3	3	3	1	AAA	domain
NACHT	PF05729.7	gi|449066693|ref|YP_007433775.1|	-	0.0024	17.5	0.1	0.0088	15.7	0.0	2.0	2	0	0	2	2	1	1	NACHT	domain
Arch_ATPase	PF01637.13	gi|449066693|ref|YP_007433775.1|	-	0.0039	16.9	2.5	0.31	10.7	0.1	2.8	2	1	0	2	2	2	1	Archaeal	ATPase
Fer4_16	PF13484.1	gi|449066693|ref|YP_007433775.1|	-	0.0042	17.7	0.1	0.0042	17.7	0.1	2.3	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
DUF258	PF03193.11	gi|449066693|ref|YP_007433775.1|	-	0.0054	15.9	0.2	0.43	9.7	0.0	2.6	2	0	0	2	2	2	1	Protein	of	unknown	function,	DUF258
AAA	PF00004.24	gi|449066693|ref|YP_007433775.1|	-	0.0088	16.2	0.0	0.29	11.3	0.0	2.7	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_33	PF13671.1	gi|449066693|ref|YP_007433775.1|	-	0.0088	15.9	0.1	0.79	9.5	0.0	3.1	2	1	0	2	2	2	1	AAA	domain
T2SE	PF00437.15	gi|449066693|ref|YP_007433775.1|	-	0.011	14.6	0.5	0.35	9.7	0.1	2.4	2	1	0	2	2	2	0	Type	II/IV	secretion	system	protein
Fer4_3	PF12798.2	gi|449066693|ref|YP_007433775.1|	-	0.012	16.1	3.5	0.012	16.1	2.4	2.1	2	0	0	2	2	1	0	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|449066693|ref|YP_007433775.1|	-	0.014	15.6	8.0	0.05	13.8	5.7	1.8	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
PRK	PF00485.13	gi|449066693|ref|YP_007433775.1|	-	0.014	14.9	0.0	0.56	9.7	0.0	2.3	2	0	0	2	2	2	0	Phosphoribulokinase	/	Uridine	kinase	family
Rad17	PF03215.10	gi|449066693|ref|YP_007433775.1|	-	0.016	13.9	0.2	2.9	6.4	0.0	2.6	2	1	0	2	2	2	0	Rad17	cell	cycle	checkpoint	protein
Dynamin_N	PF00350.18	gi|449066693|ref|YP_007433775.1|	-	0.027	14.2	0.2	1.2	8.8	0.1	2.4	2	0	0	2	2	2	0	Dynamin	family
AAA_13	PF13166.1	gi|449066693|ref|YP_007433775.1|	-	0.03	12.7	1.4	11	4.2	0.0	3.1	3	0	0	3	3	3	0	AAA	domain
SbcCD_C	PF13558.1	gi|449066693|ref|YP_007433775.1|	-	0.035	14.0	0.1	15	5.5	0.0	3.2	2	2	0	2	2	2	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_28	PF13521.1	gi|449066693|ref|YP_007433775.1|	-	0.036	14.0	0.0	9.2	6.2	0.0	2.5	2	0	0	2	2	2	0	AAA	domain
AAA_25	PF13481.1	gi|449066693|ref|YP_007433775.1|	-	0.039	13.3	1.6	0.52	9.6	0.0	2.7	3	0	0	3	3	2	0	AAA	domain
Spore_IV_A	PF09547.5	gi|449066693|ref|YP_007433775.1|	-	0.041	12.5	0.3	3.8	6.0	0.0	2.2	2	0	0	2	2	2	0	Stage	IV	sporulation	protein	A	(spore_IV_A)
UPF0079	PF02367.12	gi|449066693|ref|YP_007433775.1|	-	0.059	13.0	0.2	0.39	10.3	0.0	2.2	2	0	0	2	2	2	0	Uncharacterised	P-loop	hydrolase	UPF0079
ArgK	PF03308.11	gi|449066693|ref|YP_007433775.1|	-	0.061	12.0	0.4	4.9	5.8	0.0	2.3	2	0	0	2	2	2	0	ArgK	protein
DUF87	PF01935.12	gi|449066693|ref|YP_007433775.1|	-	0.074	12.8	1.1	2.3	7.9	0.0	3.1	3	0	0	3	3	3	0	Domain	of	unknown	function	DUF87
AAA_30	PF13604.1	gi|449066693|ref|YP_007433775.1|	-	0.17	11.4	0.3	8.9	5.8	0.0	2.8	4	0	0	4	4	2	0	AAA	domain
PduV-EutP	PF10662.4	gi|449066693|ref|YP_007433775.1|	-	0.2	11.1	1.7	9.2	5.7	0.0	3.6	4	1	0	4	4	3	0	Ethanolamine	utilisation	-	propanediol	utilisation
Fer4_8	PF13183.1	gi|449066693|ref|YP_007433775.1|	-	0.22	11.6	4.5	0.063	13.3	0.7	1.6	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
NB-ARC	PF00931.17	gi|449066693|ref|YP_007433775.1|	-	0.25	10.1	1.5	0.46	9.3	0.0	1.9	2	0	0	2	2	2	0	NB-ARC	domain
Fer4_4	PF12800.2	gi|449066693|ref|YP_007433775.1|	-	0.33	11.3	11.8	0.11	12.9	1.9	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|449066693|ref|YP_007433775.1|	-	1.3	9.4	6.4	0.36	11.2	0.9	2.2	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|449066693|ref|YP_007433775.1|	-	2.1	8.8	9.3	0.58	10.6	3.1	2.3	1	1	0	2	2	2	0	4Fe-4S	dicluster	domain
MFS_1	PF07690.11	gi|449066695|ref|YP_007433777.1|	-	2.1e-26	92.5	70.2	3.8e-21	75.2	29.7	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|449066695|ref|YP_007433777.1|	-	1.6e-22	79.7	39.8	2e-17	62.9	9.0	2.0	1	1	1	2	2	2	2	Sugar	(and	other)	transporter
MFS_2	PF13347.1	gi|449066695|ref|YP_007433777.1|	-	4.8e-09	35.1	26.3	3.2e-06	25.8	12.1	3.0	2	1	0	3	3	3	3	MFS/sugar	transport	protein
DUF3995	PF13160.1	gi|449066695|ref|YP_007433777.1|	-	0.02	14.9	2.2	0.02	14.9	1.6	3.3	4	1	0	4	4	4	0	Protein	of	unknown	function	(DUF3995)
MFS_2	PF13347.1	gi|449066696|ref|YP_007433778.1|	-	5.3	5.3	36.3	0.3	9.4	8.7	2.4	1	1	1	2	2	2	0	MFS/sugar	transport	protein
C5-epim_C	PF06662.8	gi|449066697|ref|YP_007433779.1|	-	0.067	12.4	0.1	0.17	11.1	0.0	1.7	2	0	0	2	2	2	0	D-glucuronyl	C5-epimerase	C-terminus
DUF4116	PF13475.1	gi|449066697|ref|YP_007433779.1|	-	4.3	6.8	6.0	22	4.6	0.1	3.7	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF4116)
Ribosomal_S10	PF00338.17	gi|449066699|ref|YP_007433781.1|	-	5.5e-32	109.4	0.1	6.1e-32	109.3	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S10p/S20e
GTP_EFTU	PF00009.22	gi|449066700|ref|YP_007433782.1|	-	5.3e-55	185.7	0.1	7.9e-55	185.2	0.1	1.2	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D3	PF03143.12	gi|449066700|ref|YP_007433782.1|	-	1.6e-29	101.9	0.1	5.6e-29	100.2	0.1	2.0	1	0	0	1	1	1	1	Elongation	factor	Tu	C-terminal	domain
GTP_EFTU_D2	PF03144.20	gi|449066700|ref|YP_007433782.1|	-	6.2e-19	67.8	5.9	3.9e-18	65.3	2.6	2.7	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
GTP_EFTU_D4	PF14578.1	gi|449066700|ref|YP_007433782.1|	-	8.7e-08	31.7	4.4	2.4e-07	30.2	3.0	1.8	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	4
MMR_HSR1	PF01926.18	gi|449066700|ref|YP_007433782.1|	-	3.6e-07	30.1	0.0	1.4e-06	28.2	0.0	2.0	1	1	1	2	2	2	1	50S	ribosome-binding	GTPase
Miro	PF08477.8	gi|449066700|ref|YP_007433782.1|	-	0.00039	20.9	0.1	0.0027	18.1	0.1	2.3	1	1	0	1	1	1	1	Miro-like	protein
SRPRB	PF09439.5	gi|449066700|ref|YP_007433782.1|	-	0.0012	18.1	0.1	0.71	9.0	0.0	2.3	1	1	1	2	2	2	2	Signal	recognition	particle	receptor	beta	subunit
Septin	PF00735.13	gi|449066700|ref|YP_007433782.1|	-	0.0018	17.3	0.0	0.0069	15.4	0.0	1.8	1	1	0	1	1	1	1	Septin
Gtr1_RagA	PF04670.7	gi|449066700|ref|YP_007433782.1|	-	0.0099	15.0	0.1	0.018	14.2	0.1	1.3	1	0	0	1	1	1	1	Gtr1/RagA	G	protein	conserved	region
Dynamin_N	PF00350.18	gi|449066700|ref|YP_007433782.1|	-	0.025	14.3	0.1	0.84	9.4	0.0	2.5	1	1	1	2	2	2	0	Dynamin	family
cobW	PF02492.14	gi|449066700|ref|YP_007433782.1|	-	0.049	13.0	0.4	0.27	10.6	0.1	2.1	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
DUF552	PF04472.7	gi|449066700|ref|YP_007433782.1|	-	0.089	12.7	0.2	24	4.9	0.0	2.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF552)
Ribosomal_S7	PF00177.16	gi|449066701|ref|YP_007433783.1|	-	5.7e-47	159.0	0.5	6.8e-47	158.7	0.3	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S7p/S5e
DNase-RNase	PF02577.9	gi|449066702|ref|YP_007433784.1|	-	1.2e-06	27.8	0.2	2.3e-06	26.8	0.1	1.4	1	0	0	1	1	1	1	Bifunctional	nuclease
Ribosom_S12_S23	PF00164.20	gi|449066703|ref|YP_007433785.1|	-	6.8e-41	138.5	0.1	7.7e-41	138.3	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S12/S23
KH_2	PF07650.12	gi|449066704|ref|YP_007433786.1|	-	2.2e-19	68.7	5.6	1.2e-13	50.4	0.4	2.1	1	1	1	2	2	2	2	KH	domain
KH_4	PF13083.1	gi|449066704|ref|YP_007433786.1|	-	2e-12	46.5	2.1	3.7e-07	29.6	0.1	2.2	2	0	0	2	2	2	2	KH	domain
KH_5	PF13184.1	gi|449066704|ref|YP_007433786.1|	-	3.3e-11	42.8	4.1	6.7e-11	41.8	0.7	2.1	2	0	0	2	2	2	1	NusA-like	KH	domain
KH_1	PF00013.24	gi|449066704|ref|YP_007433786.1|	-	4.1e-06	26.3	2.2	0.0077	15.8	0.3	2.5	2	1	0	2	2	2	2	KH	domain
Ribosomal_L7Ae	PF01248.21	gi|449066705|ref|YP_007433787.1|	-	3.8e-20	71.1	0.0	4.3e-20	71.0	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
RNA_pol_Rpb1_5	PF04998.12	gi|449066706|ref|YP_007433788.1|	-	9.7e-52	175.9	4.8	1.3e-51	175.4	3.3	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	5
Beta-Casp	PF10996.3	gi|449066706|ref|YP_007433788.1|	-	0.081	12.8	0.1	0.25	11.2	0.1	1.8	1	1	0	1	1	1	0	Beta-Casp	domain
RNA_pol_Rpb1_7	PF04990.7	gi|449066706|ref|YP_007433788.1|	-	0.77	9.4	6.9	0.8	9.4	0.3	2.9	2	1	1	3	3	3	0	RNA	polymerase	Rpb1,	domain	7
RNA_pol_Rpb1_1	PF04997.7	gi|449066707|ref|YP_007433789.1|	-	3.6e-91	305.9	0.2	9.4e-90	301.2	0.1	2.1	1	1	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	1
RNA_pol_Rpb1_2	PF00623.15	gi|449066707|ref|YP_007433789.1|	-	1.4e-69	233.2	0.0	2.5e-69	232.4	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	2
RNA_pol_Rpb1_3	PF04983.13	gi|449066707|ref|YP_007433789.1|	-	2.1e-33	115.2	0.0	3.5e-33	114.5	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	3
RNA_pol_Rpb1_4	PF05000.12	gi|449066707|ref|YP_007433789.1|	-	3.2e-29	100.8	0.0	6.3e-29	99.8	0.0	1.5	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	4
RNA_pol_Rpb1_5	PF04998.12	gi|449066707|ref|YP_007433789.1|	-	2.4e-27	95.9	0.0	4.4e-27	95.0	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	5
zf-ribbon_3	PF13248.1	gi|449066707|ref|YP_007433789.1|	-	0.017	14.3	4.0	3.6	6.9	0.1	3.3	3	0	0	3	3	3	0	zinc-ribbon	domain
CpXC	PF14353.1	gi|449066707|ref|YP_007433789.1|	-	0.042	13.8	0.2	0.15	12.0	0.0	2.0	2	0	0	2	2	2	0	CpXC	protein
HTH_17	PF12728.2	gi|449066707|ref|YP_007433789.1|	-	0.25	11.6	2.2	2.9	8.1	0.1	2.8	2	0	0	2	2	2	0	Helix-turn-helix	domain
UPF0547	PF10571.4	gi|449066707|ref|YP_007433789.1|	-	0.36	10.5	2.9	2.2	8.0	0.2	2.5	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zf-FPG_IleRS	PF06827.9	gi|449066707|ref|YP_007433789.1|	-	4.3	7.0	8.2	0.32	10.6	0.1	3.0	3	0	0	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
RNA_pol_Rpb2_6	PF00562.23	gi|449066708|ref|YP_007433790.1|	-	1.7e-123	412.1	0.1	2.5e-123	411.6	0.1	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	6
RNA_pol_Rpb2_1	PF04563.10	gi|449066708|ref|YP_007433790.1|	-	3.2e-63	212.3	0.0	6.1e-63	211.4	0.0	1.5	1	0	0	1	1	1	1	RNA	polymerase	beta	subunit
RNA_pol_Rpb2_2	PF04561.9	gi|449066708|ref|YP_007433790.1|	-	3.2e-44	150.6	0.0	5.7e-44	149.8	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	2
RNA_pol_Rpb2_7	PF04560.15	gi|449066708|ref|YP_007433790.1|	-	4.3e-27	94.1	0.0	1.1e-26	92.9	0.0	1.7	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	7
RNA_pol_Rpb2_3	PF04565.11	gi|449066708|ref|YP_007433790.1|	-	5.5e-26	90.1	0.0	1.2e-25	89.0	0.0	1.6	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	3
RNA_pol_Rpb2_4	PF04566.8	gi|449066708|ref|YP_007433790.1|	-	2e-20	72.3	0.2	4.6e-20	71.1	0.1	1.7	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	4
RNA_pol_Rpb2_5	PF04567.12	gi|449066708|ref|YP_007433790.1|	-	5.5e-15	55.0	0.2	1.1e-14	54.1	0.2	1.5	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	5
Spherulin4	PF12138.3	gi|449066708|ref|YP_007433790.1|	-	0.085	12.2	0.1	0.15	11.4	0.1	1.3	1	0	0	1	1	1	0	Spherulation-specific	family	4
DUF2082	PF09855.4	gi|449066708|ref|YP_007433790.1|	-	0.21	11.4	0.2	13	5.7	0.0	2.4	2	0	0	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
DUF1610	PF07754.6	gi|449066708|ref|YP_007433790.1|	-	0.61	10.2	1.5	1.4	9.1	0.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
RNA_pol_Rpb5_C	PF01191.14	gi|449066709|ref|YP_007433791.1|	-	3.9e-32	109.6	0.1	4.4e-32	109.5	0.0	1.0	1	0	0	1	1	1	1	RNA	polymerase	Rpb5,	C-terminal	domain
GTP_EFTU	PF00009.22	gi|449066710|ref|YP_007433792.1|	-	1.1e-33	116.2	0.5	4e-33	114.4	0.2	2.0	2	1	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D4	PF14578.1	gi|449066710|ref|YP_007433792.1|	-	6.7e-24	83.3	5.5	2.3e-23	81.6	3.8	2.0	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	4
IF-2	PF11987.3	gi|449066710|ref|YP_007433792.1|	-	3e-18	65.6	2.0	8e-18	64.3	1.4	1.7	1	0	0	1	1	1	1	Translation-initiation	factor	2
GTP_EFTU_D2	PF03144.20	gi|449066710|ref|YP_007433792.1|	-	3.7e-11	42.9	1.3	1.4e-09	37.9	0.0	3.0	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.18	gi|449066710|ref|YP_007433792.1|	-	3.5e-07	30.1	0.1	1.3e-06	28.3	0.1	2.1	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
Miro	PF08477.8	gi|449066710|ref|YP_007433792.1|	-	5.3e-07	30.1	0.1	2e-06	28.3	0.0	2.1	1	0	0	1	1	1	1	Miro-like	protein
Ras	PF00071.17	gi|449066710|ref|YP_007433792.1|	-	0.001	18.5	0.2	0.0077	15.6	0.1	2.7	2	1	0	2	2	2	1	Ras	family
Dynamin_N	PF00350.18	gi|449066710|ref|YP_007433792.1|	-	0.0017	18.1	0.1	0.056	13.2	0.0	2.9	2	0	0	2	2	2	1	Dynamin	family
Arf	PF00025.16	gi|449066710|ref|YP_007433792.1|	-	0.0019	17.4	0.9	1.3	8.2	0.1	3.0	2	1	0	2	2	2	2	ADP-ribosylation	factor	family
ATP_bind_1	PF03029.12	gi|449066710|ref|YP_007433792.1|	-	0.0034	16.9	0.0	0.015	14.8	0.0	2.1	1	1	0	2	2	2	1	Conserved	hypothetical	ATP	binding	protein
PduV-EutP	PF10662.4	gi|449066710|ref|YP_007433792.1|	-	0.014	14.9	0.3	1	8.8	0.0	3.8	4	1	1	5	5	5	0	Ethanolamine	utilisation	-	propanediol	utilisation
NusG	PF02357.14	gi|449066710|ref|YP_007433792.1|	-	0.017	15.3	0.3	8.3	6.7	0.0	3.5	3	0	0	3	3	3	0	Transcription	termination	factor	nusG
DUF367	PF04034.8	gi|449066710|ref|YP_007433792.1|	-	0.082	12.5	0.1	0.44	10.1	0.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF367)
AAA_23	PF13476.1	gi|449066710|ref|YP_007433792.1|	-	0.61	10.3	6.0	4.4	7.5	4.2	2.5	1	1	0	1	1	1	0	AAA	domain
NDK	PF00334.14	gi|449066711|ref|YP_007433793.1|	-	1.3e-57	193.3	0.1	1.6e-57	193.0	0.0	1.0	1	0	0	1	1	1	1	Nucleoside	diphosphate	kinase
Ribosomal_L24e	PF01246.15	gi|449066712|ref|YP_007433794.1|	-	3.3e-22	78.1	0.3	3.7e-22	77.9	0.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L24e
zf-FCS	PF06467.9	gi|449066712|ref|YP_007433794.1|	-	1e-06	28.2	1.3	1.5e-06	27.7	0.9	1.3	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
DUF581	PF04570.9	gi|449066712|ref|YP_007433794.1|	-	0.00041	19.5	0.7	0.00077	18.7	0.5	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF581)
zf-MYND	PF01753.13	gi|449066712|ref|YP_007433794.1|	-	0.0032	17.2	0.0	0.0052	16.6	0.0	1.3	1	1	0	1	1	1	1	MYND	finger
YHS	PF04945.8	gi|449066712|ref|YP_007433794.1|	-	0.0068	16.2	0.2	0.012	15.4	0.1	1.4	1	0	0	1	1	1	1	YHS	domain
DUF2175	PF09943.4	gi|449066712|ref|YP_007433794.1|	-	0.03	14.3	0.1	0.031	14.3	0.0	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2175)
zf-C4_ClpX	PF06689.8	gi|449066712|ref|YP_007433794.1|	-	0.059	12.8	0.2	0.059	12.8	0.2	1.6	2	0	0	2	2	2	0	ClpX	C4-type	zinc	finger
DUF2116	PF09889.4	gi|449066712|ref|YP_007433794.1|	-	0.14	11.9	0.6	2.7	7.8	0.1	2.0	2	0	0	2	2	2	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
Arc_trans_TRASH	PF08394.5	gi|449066712|ref|YP_007433794.1|	-	0.15	12.2	0.7	0.42	10.8	0.4	1.8	1	1	0	1	1	1	0	Archaeal	TRASH	domain
DUF329	PF03884.9	gi|449066712|ref|YP_007433794.1|	-	1.1	8.8	4.3	7.4	6.2	3.0	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF329)
DUF2256	PF10013.4	gi|449066712|ref|YP_007433794.1|	-	3.6	7.4	6.7	3.9	7.2	0.2	2.7	3	0	0	3	3	3	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2256)
Ribosomal_S28e	PF01200.13	gi|449066713|ref|YP_007433795.1|	-	7.3e-32	108.9	1.9	8.2e-32	108.7	1.3	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S28e
KOW	PF00467.24	gi|449066713|ref|YP_007433795.1|	-	0.015	14.9	0.7	0.6	9.9	0.1	2.7	2	1	0	2	2	2	0	KOW	motif
UPRTase	PF14681.1	gi|449066714|ref|YP_007433796.1|	-	4.5e-57	192.5	0.0	5.2e-57	192.3	0.0	1.0	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
Pribosyltran	PF00156.22	gi|449066714|ref|YP_007433796.1|	-	3.7e-09	36.3	0.4	5.9e-09	35.7	0.3	1.3	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
PRTase_2	PF15609.1	gi|449066714|ref|YP_007433796.1|	-	0.12	11.6	0.0	0.16	11.2	0.0	1.4	1	1	0	1	1	1	0	Phosphoribosyl	transferase
GatB_N	PF02934.10	gi|449066715|ref|YP_007433797.1|	-	3.7e-106	354.2	0.0	5.2e-106	353.7	0.0	1.2	1	0	0	1	1	1	1	GatB/GatE	catalytic	domain
GatB_Yqey	PF02637.13	gi|449066715|ref|YP_007433797.1|	-	1.7e-40	138.1	7.4	1.7e-40	138.1	5.1	2.1	2	0	0	2	2	2	1	GatB	domain
Med7	PF05983.6	gi|449066715|ref|YP_007433797.1|	-	0.039	13.7	0.7	0.08	12.7	0.5	1.4	1	0	0	1	1	1	0	MED7	protein
DUF3753	PF12575.3	gi|449066715|ref|YP_007433797.1|	-	0.081	12.7	0.1	0.36	10.6	0.1	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3753)
Pribosyltran	PF00156.22	gi|449066716|ref|YP_007433798.1|	-	1e-21	76.9	0.5	1.9e-21	76.0	0.4	1.5	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.1	gi|449066716|ref|YP_007433798.1|	-	0.052	12.7	0.0	0.08	12.1	0.0	1.3	1	0	0	1	1	1	0	Uracil	phosphoribosyltransferase
HTH_Tnp_4	PF13613.1	gi|449066716|ref|YP_007433798.1|	-	0.12	11.9	0.0	0.28	10.7	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	of	DDE	superfamily	endonuclease
Radical_SAM	PF04055.16	gi|449066718|ref|YP_007433800.1|	-	4.6e-19	69.1	0.0	4.6e-19	69.1	0.0	2.0	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|449066718|ref|YP_007433800.1|	-	1e-07	31.9	1.0	2.3e-07	30.8	0.0	2.1	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|449066718|ref|YP_007433800.1|	-	1.9e-06	28.0	0.9	2.9e-06	27.4	0.0	1.8	1	1	1	2	2	2	1	4Fe-4S	single	cluster	domain
Peptidase_S13	PF02113.10	gi|449066718|ref|YP_007433800.1|	-	0.042	12.3	0.0	0.18	10.2	0.0	1.9	3	0	0	3	3	3	0	D-Ala-D-Ala	carboxypeptidase	3	(S13)	family
AIRS	PF00586.19	gi|449066719|ref|YP_007433801.1|	-	2e-13	50.3	0.0	3e-13	49.8	0.0	1.3	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
AIRS_C	PF02769.17	gi|449066719|ref|YP_007433801.1|	-	1.5e-06	28.2	0.0	2.1e-06	27.7	0.0	1.2	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
Lyase_1	PF00206.15	gi|449066720|ref|YP_007433802.1|	-	5.7e-48	163.7	0.1	8e-48	163.2	0.0	1.2	1	0	0	1	1	1	1	Lyase
ADSL_C	PF10397.4	gi|449066720|ref|YP_007433802.1|	-	1.8e-16	59.8	0.0	5.9e-16	58.2	0.0	2.0	1	0	0	1	1	1	1	Adenylosuccinate	lyase	C-terminus
ASL_C	PF08328.6	gi|449066720|ref|YP_007433802.1|	-	0.00055	19.7	0.7	0.0016	18.2	0.5	1.9	1	0	0	1	1	1	1	Adenylosuccinate	lyase	C-terminal
ASL_C2	PF14698.1	gi|449066720|ref|YP_007433802.1|	-	0.099	12.7	0.0	0.34	11.0	0.0	1.9	2	0	0	2	2	2	0	Argininosuccinate	lyase	C-terminal
DUF2120	PF09893.4	gi|449066720|ref|YP_007433802.1|	-	0.85	9.5	6.5	0.26	11.2	1.2	2.3	2	1	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2120)
DUF1297	PF06973.7	gi|449066721|ref|YP_007433803.1|	-	9.2e-75	250.0	0.0	1.3e-74	249.5	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1297)
DUF1246	PF06849.7	gi|449066721|ref|YP_007433803.1|	-	2.5e-40	137.0	0.0	3.8e-40	136.5	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1246)
ATP-grasp_4	PF13535.1	gi|449066721|ref|YP_007433803.1|	-	0.00073	19.3	0.0	0.0034	17.1	0.0	1.9	1	1	0	1	1	1	1	ATP-grasp	domain
GARS_A	PF01071.14	gi|449066721|ref|YP_007433803.1|	-	0.085	12.4	0.0	0.16	11.5	0.0	1.4	1	0	0	1	1	1	0	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
DUF1297	PF06973.7	gi|449066722|ref|YP_007433804.1|	-	5.5e-81	270.3	0.0	7e-81	270.0	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1297)
DUF1246	PF06849.7	gi|449066722|ref|YP_007433804.1|	-	8.8e-46	154.7	0.0	1.3e-45	154.1	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1246)
ATP-grasp_4	PF13535.1	gi|449066722|ref|YP_007433804.1|	-	3e-08	33.6	0.0	7.9e-07	28.9	0.0	2.1	1	1	0	1	1	1	1	ATP-grasp	domain
Adenylsucc_synt	PF00709.16	gi|449066723|ref|YP_007433805.1|	-	4.2e-79	266.1	0.2	1.5e-39	135.8	0.0	3.0	1	1	2	3	3	3	3	Adenylosuccinate	synthetase
Pyr_redox_2	PF07992.9	gi|449066724|ref|YP_007433806.1|	-	2.7e-10	40.4	0.5	0.0018	18.2	0.0	3.2	3	0	0	3	3	3	3	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|449066724|ref|YP_007433806.1|	-	1.8e-09	36.5	0.0	5.6e-05	21.7	0.0	2.3	2	0	0	2	2	2	2	HI0933-like	protein
DAO	PF01266.19	gi|449066724|ref|YP_007433806.1|	-	3.3e-09	36.1	0.0	0.00059	18.8	0.0	2.4	2	1	0	2	2	2	2	FAD	dependent	oxidoreductase
GIDA	PF01134.17	gi|449066724|ref|YP_007433806.1|	-	4.7e-09	35.5	1.0	5.6e-05	22.1	0.0	2.9	3	0	0	3	3	3	2	Glucose	inhibited	division	protein	A
Lycopene_cycl	PF05834.7	gi|449066724|ref|YP_007433806.1|	-	2.3e-05	23.4	0.0	0.00053	19.0	0.0	2.1	2	0	0	2	2	2	1	Lycopene	cyclase	protein
Pyr_redox_3	PF13738.1	gi|449066724|ref|YP_007433806.1|	-	8.8e-05	22.6	0.1	0.49	10.4	0.0	2.5	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_9	PF13454.1	gi|449066724|ref|YP_007433806.1|	-	0.00024	20.9	0.0	0.022	14.5	0.0	2.3	2	0	0	2	2	2	1	FAD-NAD(P)-binding
Thi4	PF01946.12	gi|449066724|ref|YP_007433806.1|	-	0.00035	19.7	0.2	0.0024	17.0	0.0	2.2	2	0	0	2	2	2	1	Thi4	family
Pyr_redox	PF00070.22	gi|449066724|ref|YP_007433806.1|	-	0.00039	20.7	0.2	1.8	9.0	0.1	3.3	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.19	gi|449066724|ref|YP_007433806.1|	-	0.00043	19.2	0.9	0.0011	17.8	0.0	2.0	3	0	0	3	3	3	1	FAD	binding	domain
NAD_binding_8	PF13450.1	gi|449066724|ref|YP_007433806.1|	-	0.00043	20.2	0.0	0.0018	18.2	0.0	2.1	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_3	PF01494.14	gi|449066724|ref|YP_007433806.1|	-	0.018	14.1	0.0	0.04	12.9	0.0	1.6	1	0	0	1	1	1	0	FAD	binding	domain
Trp_halogenase	PF04820.9	gi|449066724|ref|YP_007433806.1|	-	0.051	12.2	0.0	0.13	10.8	0.0	1.6	2	0	0	2	2	2	0	Tryptophan	halogenase
BRCT	PF00533.21	gi|449066724|ref|YP_007433806.1|	-	0.077	13.1	0.0	0.17	12.0	0.0	1.6	1	0	0	1	1	1	0	BRCA1	C	Terminus	(BRCT)	domain
GDC-P	PF02347.11	gi|449066724|ref|YP_007433806.1|	-	0.088	11.4	0.0	0.14	10.8	0.0	1.2	1	0	0	1	1	1	0	Glycine	cleavage	system	P-protein
HTH_24	PF13412.1	gi|449066725|ref|YP_007433807.1|	-	1.9e-08	33.5	1.1	0.0021	17.3	0.1	2.5	2	0	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|449066725|ref|YP_007433807.1|	-	2.9e-06	26.7	0.0	6.4e-05	22.4	0.0	2.3	2	0	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
DUF2805	PF10985.3	gi|449066725|ref|YP_007433807.1|	-	4.7e-05	23.2	0.5	0.016	15.1	0.1	2.5	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2805)
HTH_27	PF13463.1	gi|449066725|ref|YP_007433807.1|	-	0.0063	16.8	0.0	0.058	13.7	0.0	2.3	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
Sigma70_r4	PF04545.11	gi|449066725|ref|YP_007433807.1|	-	0.0081	15.4	0.0	0.26	10.6	0.0	2.5	2	0	0	2	2	2	1	Sigma-70,	region	4
HTH_11	PF08279.7	gi|449066725|ref|YP_007433807.1|	-	0.01	15.4	0.1	5.4	6.7	0.0	2.7	2	0	0	2	2	2	2	HTH	domain
Aldo_ket_red	PF00248.16	gi|449066725|ref|YP_007433807.1|	-	0.011	14.6	0.2	0.23	10.2	0.0	2.2	2	0	0	2	2	2	0	Aldo/keto	reductase	family
MarR	PF01047.17	gi|449066725|ref|YP_007433807.1|	-	0.011	15.3	0.2	1.1	9.0	0.0	2.9	3	0	0	3	3	3	0	MarR	family
DDRGK	PF09756.4	gi|449066725|ref|YP_007433807.1|	-	0.016	14.5	0.3	0.36	10.2	0.0	2.3	2	0	0	2	2	2	0	DDRGK	domain
HTH_Mga	PF08280.6	gi|449066725|ref|YP_007433807.1|	-	0.033	13.9	0.0	2.8	7.7	0.0	2.6	2	0	0	2	2	2	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
Peptidase_C71	PF12386.3	gi|449066725|ref|YP_007433807.1|	-	0.039	13.3	0.2	0.1	12.0	0.1	1.7	1	0	0	1	1	1	0	Pseudomurein	endo-isopeptidase	Pei
LysM	PF01476.15	gi|449066725|ref|YP_007433807.1|	-	0.14	12.0	0.5	2.1	8.3	0.0	2.9	3	0	0	3	3	3	0	LysM	domain
PDT	PF00800.13	gi|449066726|ref|YP_007433808.1|	-	8.2e-18	64.5	0.3	1.1e-17	64.1	0.2	1.2	1	0	0	1	1	1	1	Prephenate	dehydratase
ACT	PF01842.20	gi|449066726|ref|YP_007433808.1|	-	7.6e-06	25.2	0.0	2.1e-05	23.8	0.0	1.8	2	0	0	2	2	2	1	ACT	domain
PLAC9	PF15205.1	gi|449066726|ref|YP_007433808.1|	-	0.11	12.7	0.0	0.2	11.9	0.0	1.5	1	0	0	1	1	1	0	Placenta-specific	protein	9
PALP	PF00291.20	gi|449066727|ref|YP_007433809.1|	-	2.4e-74	250.3	1.2	2.9e-74	250.0	0.9	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
ACT	PF01842.20	gi|449066727|ref|YP_007433809.1|	-	0.011	15.1	0.8	0.044	13.2	0.0	2.3	2	0	0	2	2	2	0	ACT	domain
ACT_6	PF13740.1	gi|449066727|ref|YP_007433809.1|	-	0.013	15.2	0.0	0.03	14.0	0.0	1.6	1	0	0	1	1	1	0	ACT	domain
EFG_C	PF00679.19	gi|449066727|ref|YP_007433809.1|	-	0.021	14.6	0.0	0.05	13.4	0.0	1.6	1	0	0	1	1	1	0	Elongation	factor	G	C-terminus
HIT	PF01230.18	gi|449066728|ref|YP_007433810.1|	-	1.5e-15	57.5	0.0	1.9e-15	57.1	0.0	1.2	1	0	0	1	1	1	1	HIT	domain
CwfJ_C_1	PF04677.10	gi|449066728|ref|YP_007433810.1|	-	1.6e-07	30.9	0.2	3.3e-07	29.9	0.1	1.5	1	1	0	1	1	1	1	Protein	similar	to	CwfJ	C-terminus	1
DcpS_C	PF11969.3	gi|449066728|ref|YP_007433810.1|	-	2.5e-06	27.6	0.0	3.7e-06	27.1	0.0	1.2	1	0	0	1	1	1	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
DUF4187	PF13821.1	gi|449066728|ref|YP_007433810.1|	-	0.23	11.0	1.2	4.1	7.0	0.0	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4187)
Rad51	PF08423.6	gi|449066729|ref|YP_007433811.1|	-	1.2e-92	309.4	0.2	1.5e-92	309.1	0.1	1.1	1	0	0	1	1	1	1	Rad51
RecA	PF00154.16	gi|449066729|ref|YP_007433811.1|	-	4.7e-14	52.1	0.2	6.7e-14	51.6	0.2	1.2	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
AAA_25	PF13481.1	gi|449066729|ref|YP_007433811.1|	-	1e-13	51.1	0.0	1.7e-13	50.4	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
HHH_5	PF14520.1	gi|449066729|ref|YP_007433811.1|	-	1.9e-10	40.7	0.1	4.7e-10	39.4	0.1	1.7	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
KaiC	PF06745.8	gi|449066729|ref|YP_007433811.1|	-	4.8e-10	38.9	0.1	8.7e-10	38.0	0.1	1.4	1	0	0	1	1	1	1	KaiC
Cdd1	PF11731.3	gi|449066729|ref|YP_007433811.1|	-	0.0052	16.6	0.0	0.013	15.4	0.0	1.7	1	0	0	1	1	1	1	Pathogenicity	locus
AAA_22	PF13401.1	gi|449066729|ref|YP_007433811.1|	-	0.009	16.1	0.2	0.03	14.4	0.1	1.9	1	1	0	1	1	1	1	AAA	domain
Bac_DnaA	PF00308.13	gi|449066729|ref|YP_007433811.1|	-	0.022	14.3	0.0	0.045	13.3	0.0	1.4	1	0	0	1	1	1	0	Bacterial	dnaA	protein
RTC_insert	PF05189.8	gi|449066729|ref|YP_007433811.1|	-	0.043	13.8	0.1	0.11	12.4	0.0	1.7	1	0	0	1	1	1	0	RNA	3'-terminal	phosphate	cyclase	(RTC),	insert	domain
HHH_2	PF12826.2	gi|449066729|ref|YP_007433811.1|	-	0.057	13.3	0.1	0.17	11.7	0.0	1.8	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
AAA_24	PF13479.1	gi|449066729|ref|YP_007433811.1|	-	0.083	12.4	0.0	0.28	10.7	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
MarR_2	PF12802.2	gi|449066729|ref|YP_007433811.1|	-	0.15	11.7	0.9	6.4	6.5	0.1	3.0	3	0	0	3	3	3	0	MarR	family
UPF0113	PF03657.8	gi|449066730|ref|YP_007433812.1|	-	0.0014	18.2	0.7	0.0018	17.9	0.5	1.3	1	1	0	1	1	1	1	Uncharacterised	protein	family	(UPF0113)
Recep_L_domain	PF01030.19	gi|449066730|ref|YP_007433812.1|	-	0.039	13.9	1.4	0.49	10.3	0.1	2.1	2	0	0	2	2	2	0	Receptor	L	domain
RAMPs	PF03787.10	gi|449066730|ref|YP_007433812.1|	-	0.36	10.6	2.7	0.67	9.7	1.5	1.7	1	1	1	2	2	2	0	RAMP	superfamily
Nol1_Nop2_Fmu	PF01189.12	gi|449066731|ref|YP_007433813.1|	-	9.5e-55	185.9	0.0	1.3e-54	185.5	0.0	1.1	1	0	0	1	1	1	1	NOL1/NOP2/sun	family
PCMT	PF01135.14	gi|449066731|ref|YP_007433813.1|	-	0.0013	18.2	0.0	0.002	17.7	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
FtsJ	PF01728.14	gi|449066731|ref|YP_007433813.1|	-	0.0014	18.6	0.0	0.0019	18.1	0.0	1.3	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
Methyltransf_4	PF02390.12	gi|449066731|ref|YP_007433813.1|	-	0.0025	16.8	0.0	0.0045	16.0	0.0	1.3	1	0	0	1	1	1	1	Putative	methyltransferase
Fibrillarin	PF01269.12	gi|449066731|ref|YP_007433813.1|	-	0.0057	15.5	0.0	0.0085	15.0	0.0	1.2	1	0	0	1	1	1	1	Fibrillarin
RrnaAD	PF00398.15	gi|449066731|ref|YP_007433813.1|	-	0.01	14.8	0.0	0.016	14.2	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	RNA	adenine	dimethylase
Methyltransf_18	PF12847.2	gi|449066731|ref|YP_007433813.1|	-	0.045	14.3	0.0	0.082	13.4	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|449066731|ref|YP_007433813.1|	-	0.056	13.0	0.0	0.1	12.2	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
YopH_N	PF09013.5	gi|449066731|ref|YP_007433813.1|	-	0.13	11.9	0.1	0.29	10.7	0.0	1.6	2	0	0	2	2	2	0	YopH,	N-terminal
CYTH	PF01928.16	gi|449066732|ref|YP_007433814.1|	-	1e-31	110.0	5.4	1.2e-31	109.8	3.7	1.0	1	0	0	1	1	1	1	CYTH	domain
BDV_P24	PF06595.6	gi|449066732|ref|YP_007433814.1|	-	0.093	12.4	1.0	0.2	11.3	0.3	1.7	2	0	0	2	2	2	0	Borna	disease	virus	P24	protein
SAM_adeno_trans	PF01887.11	gi|449066733|ref|YP_007433815.1|	-	9.8e-85	283.7	0.4	1.1e-84	283.5	0.3	1.0	1	0	0	1	1	1	1	S-adenosyl-l-methionine	hydroxide	adenosyltransferase
DUF1474	PF07342.6	gi|449066733|ref|YP_007433815.1|	-	0.07	13.3	0.0	0.15	12.3	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1474)
CTP_transf_2	PF01467.21	gi|449066734|ref|YP_007433816.1|	-	5.4e-10	39.5	0.1	7.4e-10	39.0	0.1	1.2	1	0	0	1	1	1	1	Cytidylyltransferase
DUF99	PF01949.11	gi|449066735|ref|YP_007433817.1|	-	9e-38	129.2	0.0	1.1e-37	129.0	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF99
Cdc6_C	PF09079.6	gi|449066736|ref|YP_007433818.1|	-	1.7e-24	85.3	0.3	9.2e-24	82.9	0.2	2.3	2	0	0	2	2	2	1	CDC6,	C	terminal
AAA_22	PF13401.1	gi|449066736|ref|YP_007433818.1|	-	8.1e-13	48.6	0.2	7.7e-12	45.4	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|449066736|ref|YP_007433818.1|	-	2.7e-12	47.0	0.8	5.3e-11	42.8	0.5	2.6	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA	PF00004.24	gi|449066736|ref|YP_007433818.1|	-	5.1e-09	36.4	0.0	1.3e-08	35.1	0.0	1.7	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Arch_ATPase	PF01637.13	gi|449066736|ref|YP_007433818.1|	-	2.4e-06	27.4	1.2	3.8e-05	23.4	0.1	2.3	1	1	0	2	2	2	1	Archaeal	ATPase
NB-ARC	PF00931.17	gi|449066736|ref|YP_007433818.1|	-	1e-05	24.5	0.0	1.5e-05	24.0	0.0	1.3	1	0	0	1	1	1	1	NB-ARC	domain
KAP_NTPase	PF07693.9	gi|449066736|ref|YP_007433818.1|	-	0.0006	18.9	0.0	0.0073	15.3	0.0	2.1	1	1	1	2	2	2	1	KAP	family	P-loop	domain
AAA_32	PF13654.1	gi|449066736|ref|YP_007433818.1|	-	0.00071	18.3	0.1	0.021	13.4	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
Sigma54_activat	PF00158.21	gi|449066736|ref|YP_007433818.1|	-	0.0025	17.3	0.0	0.0062	16.0	0.0	1.8	1	1	0	1	1	1	1	Sigma-54	interaction	domain
DEAD	PF00270.24	gi|449066736|ref|YP_007433818.1|	-	0.0072	15.8	0.5	4.2	6.8	0.1	2.5	1	1	0	2	2	2	2	DEAD/DEAH	box	helicase
Bac_DnaA	PF00308.13	gi|449066736|ref|YP_007433818.1|	-	0.0073	15.9	0.9	0.045	13.4	0.6	2.0	1	1	0	1	1	1	1	Bacterial	dnaA	protein
Pox_A32	PF04665.7	gi|449066736|ref|YP_007433818.1|	-	0.0078	15.5	0.1	0.013	14.8	0.1	1.4	1	0	0	1	1	1	1	Poxvirus	A32	protein
DUF815	PF05673.8	gi|449066736|ref|YP_007433818.1|	-	0.014	14.3	0.0	0.023	13.6	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
ResIII	PF04851.10	gi|449066736|ref|YP_007433818.1|	-	0.015	15.1	0.0	0.033	14.0	0.0	1.5	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
NACHT	PF05729.7	gi|449066736|ref|YP_007433818.1|	-	0.041	13.5	0.0	0.1	12.2	0.0	1.7	1	0	0	1	1	1	0	NACHT	domain
PIF1	PF05970.9	gi|449066736|ref|YP_007433818.1|	-	0.044	12.7	0.0	0.096	11.6	0.0	1.5	1	0	0	1	1	1	0	PIF1-like	helicase
Torsin	PF06309.6	gi|449066736|ref|YP_007433818.1|	-	0.053	13.4	0.0	0.099	12.5	0.0	1.4	1	0	0	1	1	1	0	Torsin
AAA_17	PF13207.1	gi|449066736|ref|YP_007433818.1|	-	0.11	13.3	0.6	0.44	11.3	0.4	2.3	1	1	0	1	1	1	0	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|449066736|ref|YP_007433818.1|	-	0.11	11.8	0.0	0.18	11.2	0.0	1.4	1	1	0	1	1	1	0	FtsK/SpoIIIE	family
E2F_TDP	PF02319.15	gi|449066736|ref|YP_007433818.1|	-	0.28	10.7	2.9	2.3	7.8	0.1	3.1	3	0	0	3	3	3	0	E2F/DP	family	winged-helix	DNA-binding	domain
ODV-E18	PF10717.4	gi|449066739|ref|YP_007433821.1|	-	0.051	13.0	0.5	0.066	12.6	0.4	1.3	1	1	0	1	1	1	0	Occlusion-derived	virus	envelope	protein	ODV-E18
MFS_1	PF07690.11	gi|449066740|ref|YP_007433822.1|	-	2.4e-26	92.3	48.5	8.2e-16	57.6	16.9	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_2	PF13347.1	gi|449066740|ref|YP_007433822.1|	-	1.5	7.0	43.0	0.32	9.3	4.0	3.9	1	1	3	4	4	4	0	MFS/sugar	transport	protein
UPF0542	PF15086.1	gi|449066740|ref|YP_007433822.1|	-	4.2	7.1	5.3	1.7	8.4	0.2	2.6	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0542
SWIM	PF04434.12	gi|449066742|ref|YP_007433824.1|	-	0.00093	18.6	0.6	0.0018	17.6	0.4	1.5	1	0	0	1	1	1	1	SWIM	zinc	finger
Elf1	PF05129.8	gi|449066744|ref|YP_007433826.1|	-	1.2e-20	72.9	0.2	1.5e-20	72.6	0.1	1.1	1	0	0	1	1	1	1	Transcription	elongation	factor	Elf1	like
Lar_restr_allev	PF14354.1	gi|449066744|ref|YP_007433826.1|	-	0.00034	20.8	0.1	0.00058	20.1	0.1	1.3	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
OrfB_Zn_ribbon	PF07282.6	gi|449066744|ref|YP_007433826.1|	-	0.032	13.9	0.2	0.051	13.2	0.1	1.3	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
PocR	PF10114.4	gi|449066744|ref|YP_007433826.1|	-	0.12	11.5	0.1	0.14	11.3	0.0	1.1	1	0	0	1	1	1	0	Sensory	domain	found	in	PocR
DUF2387	PF09526.5	gi|449066744|ref|YP_007433826.1|	-	0.12	12.3	1.4	0.2	11.5	0.9	1.6	1	1	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
Ribosomal_L32p	PF01783.18	gi|449066744|ref|YP_007433826.1|	-	0.17	12.0	1.9	0.92	9.7	1.3	2.1	1	1	0	1	1	1	0	Ribosomal	L32p	protein	family
zf-NADH-PPase	PF09297.6	gi|449066744|ref|YP_007433826.1|	-	0.22	11.0	1.0	1.3	8.5	0.7	2.0	1	1	0	1	1	1	0	NADH	pyrophosphatase	zinc	ribbon	domain
zf-FPG_IleRS	PF06827.9	gi|449066744|ref|YP_007433826.1|	-	0.26	10.9	1.9	0.77	9.4	1.3	1.8	1	1	0	1	1	1	0	Zinc	finger	found	in	FPG	and	IleRS
Zn_Tnp_IS1595	PF12760.2	gi|449066744|ref|YP_007433826.1|	-	0.41	10.4	1.9	1.2	9.0	1.3	1.8	1	1	0	1	1	1	0	Transposase	zinc-ribbon	domain
CpXC	PF14353.1	gi|449066744|ref|YP_007433826.1|	-	0.48	10.4	2.5	5.8	6.8	0.1	2.1	1	1	1	2	2	2	0	CpXC	protein
zinc_ribbon_5	PF13719.1	gi|449066744|ref|YP_007433826.1|	-	0.48	10.0	5.0	7.2	6.2	3.4	2.3	1	1	0	1	1	1	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|449066744|ref|YP_007433826.1|	-	0.72	9.6	5.0	11	5.8	3.4	2.3	1	1	0	1	1	1	0	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|449066744|ref|YP_007433826.1|	-	0.76	9.0	3.7	6.8	6.0	2.8	2.1	1	1	1	2	2	2	0	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|449066744|ref|YP_007433826.1|	-	1.3	8.4	4.2	16	4.8	2.4	2.2	1	1	1	2	2	2	0	TFIIB	zinc-binding
PcrB	PF01884.12	gi|449066745|ref|YP_007433827.1|	-	2.2e-58	197.2	1.9	2.4e-58	197.1	1.3	1.0	1	0	0	1	1	1	1	PcrB	family
IMPDH	PF00478.20	gi|449066745|ref|YP_007433827.1|	-	2.2e-05	23.4	1.1	0.00014	20.8	0.4	2.1	2	0	0	2	2	2	1	IMP	dehydrogenase	/	GMP	reductase	domain
His_biosynth	PF00977.16	gi|449066745|ref|YP_007433827.1|	-	0.00018	20.8	0.3	0.00035	19.9	0.2	1.4	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
NAD_binding_7	PF13241.1	gi|449066745|ref|YP_007433827.1|	-	0.0021	18.2	0.7	0.012	15.8	0.4	2.1	2	0	0	2	2	2	1	Putative	NAD(P)-binding
DHO_dh	PF01180.16	gi|449066745|ref|YP_007433827.1|	-	0.0058	15.6	1.0	0.0084	15.0	0.7	1.2	1	0	0	1	1	1	1	Dihydroorotate	dehydrogenase
NanE	PF04131.9	gi|449066745|ref|YP_007433827.1|	-	0.01	14.8	0.6	0.057	12.3	0.2	2.0	2	0	0	2	2	2	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
Shikimate_DH	PF01488.15	gi|449066745|ref|YP_007433827.1|	-	0.026	14.6	1.2	0.026	14.6	0.8	2.2	2	0	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
Trp_syntA	PF00290.15	gi|449066745|ref|YP_007433827.1|	-	0.054	12.0	1.5	0.075	11.5	0.5	1.7	2	0	0	2	2	2	0	Tryptophan	synthase	alpha	chain
Ribul_P_3_epim	PF00834.14	gi|449066745|ref|YP_007433827.1|	-	0.081	12.0	0.9	0.18	10.8	0.4	1.7	2	0	0	2	2	2	0	Ribulose-phosphate	3	epimerase	family
BON	PF04972.12	gi|449066745|ref|YP_007433827.1|	-	0.1	12.3	5.6	4.5	7.1	1.4	2.5	1	1	1	2	2	2	0	BON	domain
Sec61_beta	PF03911.11	gi|449066746|ref|YP_007433828.1|	-	6.6e-17	61.0	2.8	7.6e-17	60.8	1.9	1.1	1	0	0	1	1	1	1	Sec61beta	family
GNVR	PF13807.1	gi|449066746|ref|YP_007433828.1|	-	0.078	12.7	0.5	0.096	12.4	0.3	1.1	1	0	0	1	1	1	0	G-rich	domain	on	putative	tyrosine	kinase
DUF367	PF04034.8	gi|449066748|ref|YP_007433830.1|	-	2.2e-36	124.2	0.0	2.6e-36	124.0	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF367)
RLI	PF04068.10	gi|449066748|ref|YP_007433830.1|	-	2.3e-12	46.2	0.3	3.6e-12	45.6	0.2	1.3	1	0	0	1	1	1	1	Possible	Fer4-like	domain	in	RNase	L	inhibitor,	RLI
AsnC_trans_reg	PF01037.16	gi|449066749|ref|YP_007433831.1|	-	1.2e-14	53.7	0.6	1.3e-14	53.6	0.4	1.0	1	0	0	1	1	1	1	AsnC	family
Repressor_Mnt	PF11423.3	gi|449066749|ref|YP_007433831.1|	-	0.28	10.5	1.4	4.1	6.7	0.1	2.6	2	0	0	2	2	2	0	Regulatory	protein	Mnt
DUF1743	PF08489.6	gi|449066750|ref|YP_007433832.1|	-	3.3e-32	110.6	0.0	7e-32	109.6	0.0	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1743)
OrfB_Zn_ribbon	PF07282.6	gi|449066750|ref|YP_007433832.1|	-	0.0005	19.6	0.6	0.0012	18.4	0.4	1.6	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Zn_Tnp_IS1595	PF12760.2	gi|449066750|ref|YP_007433832.1|	-	0.025	14.3	4.7	0.07	12.9	3.3	1.8	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
IBR	PF01485.16	gi|449066750|ref|YP_007433832.1|	-	0.026	14.4	0.9	0.053	13.4	0.6	1.4	1	0	0	1	1	1	0	IBR	domain
zf-H2C2_2	PF13465.1	gi|449066750|ref|YP_007433832.1|	-	0.039	14.2	6.3	0.49	10.7	0.7	2.9	2	0	0	2	2	2	0	Zinc-finger	double	domain
Ribosomal_L37ae	PF01780.14	gi|449066750|ref|YP_007433832.1|	-	0.051	13.4	0.6	0.1	12.4	0.4	1.6	1	0	0	1	1	1	0	Ribosomal	L37ae	protein	family
PhnA_Zn_Ribbon	PF08274.7	gi|449066750|ref|YP_007433832.1|	-	0.053	13.3	1.4	0.18	11.6	1.0	1.9	1	1	0	1	1	1	0	PhnA	Zinc-Ribbon
Zn-ribbon_8	PF09723.5	gi|449066750|ref|YP_007433832.1|	-	0.059	13.3	4.0	1.8	8.6	0.8	2.5	2	0	0	2	2	2	0	Zinc	ribbon	domain
C1_1	PF00130.17	gi|449066750|ref|YP_007433832.1|	-	0.18	11.5	1.2	0.39	10.4	0.8	1.5	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
RNA_POL_M_15KD	PF02150.11	gi|449066750|ref|YP_007433832.1|	-	0.23	11.1	5.0	3.1	7.5	2.5	2.9	2	1	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
zf-C2H2	PF00096.21	gi|449066750|ref|YP_007433832.1|	-	1.6	9.2	5.7	7.2	7.1	0.7	2.8	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
Yip1	PF04893.12	gi|449066751|ref|YP_007433833.1|	-	0.0026	17.2	28.4	0.0093	15.4	2.8	2.9	2	1	1	3	3	3	2	Yip1	domain
Oxidored_q4	PF00507.14	gi|449066751|ref|YP_007433833.1|	-	0.011	15.4	2.8	0.011	15.4	1.9	2.8	3	0	0	3	3	3	0	NADH-ubiquinone/plastoquinone	oxidoreductase,	chain	3
EpsG	PF14897.1	gi|449066751|ref|YP_007433833.1|	-	0.23	10.3	24.6	0.17	10.8	3.5	2.4	1	1	1	2	2	2	0	EpsG	family
DUF1282	PF06930.7	gi|449066751|ref|YP_007433833.1|	-	0.64	9.6	15.9	1.1	8.8	9.9	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1282)
DoxX	PF07681.7	gi|449066751|ref|YP_007433833.1|	-	1.6	9.1	8.1	0.37	11.2	1.5	2.5	1	1	1	2	2	2	0	DoxX
ABC_tran	PF00005.22	gi|449066752|ref|YP_007433834.1|	-	5.8e-24	84.9	0.0	1.2e-23	83.9	0.0	1.5	1	1	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|449066752|ref|YP_007433834.1|	-	2e-11	44.4	1.5	3.7e-05	23.8	0.1	2.2	1	1	1	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|449066752|ref|YP_007433834.1|	-	3.7e-09	36.1	0.8	0.00019	20.6	0.0	2.2	1	1	0	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|449066752|ref|YP_007433834.1|	-	2.6e-06	27.8	0.7	4.9e-06	27.0	0.5	1.6	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|449066752|ref|YP_007433834.1|	-	1.9e-05	23.9	0.1	0.022	14.0	0.1	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_22	PF13401.1	gi|449066752|ref|YP_007433834.1|	-	0.00011	22.3	0.0	0.00019	21.5	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|449066752|ref|YP_007433834.1|	-	0.00033	20.1	0.0	0.00055	19.4	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
DUF258	PF03193.11	gi|449066752|ref|YP_007433834.1|	-	0.0054	15.9	0.0	0.0074	15.4	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
DUF3699	PF12480.3	gi|449066752|ref|YP_007433834.1|	-	0.029	13.9	0.0	0.06	12.9	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3699)
DUF3584	PF12128.3	gi|449066752|ref|YP_007433834.1|	-	0.11	9.8	0.1	0.15	9.3	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
AAA_5	PF07728.9	gi|449066752|ref|YP_007433834.1|	-	0.12	12.1	0.4	1.6	8.4	0.1	2.4	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
AAA_13	PF13166.1	gi|449066752|ref|YP_007433834.1|	-	0.12	10.7	0.1	0.25	9.7	0.0	1.3	1	1	0	1	1	1	0	AAA	domain
AAA_19	PF13245.1	gi|449066752|ref|YP_007433834.1|	-	0.12	12.0	0.0	0.24	11.1	0.0	1.4	1	0	0	1	1	1	0	Part	of	AAA	domain
NTPase_1	PF03266.10	gi|449066752|ref|YP_007433834.1|	-	0.12	12.0	0.6	8.1	6.1	0.0	2.9	2	1	1	3	3	3	0	NTPase
AAA_18	PF13238.1	gi|449066752|ref|YP_007433834.1|	-	0.48	10.7	3.1	2.8	8.2	1.7	2.5	1	1	0	1	1	1	0	AAA	domain
AAA_14	PF13173.1	gi|449066752|ref|YP_007433834.1|	-	0.71	9.7	3.6	5.7	6.8	1.5	2.6	2	1	0	2	2	2	0	AAA	domain
DUF4491	PF14898.1	gi|449066753|ref|YP_007433835.1|	-	0.068	13.3	5.7	0.091	12.9	3.9	1.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4491)
MerC	PF03203.9	gi|449066753|ref|YP_007433835.1|	-	0.079	13.3	2.8	0.088	13.1	2.0	1.0	1	0	0	1	1	1	0	MerC	mercury	resistance	protein
DUF2534	PF10749.4	gi|449066753|ref|YP_007433835.1|	-	0.32	10.9	3.6	0.42	10.5	2.5	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2534)
EmrE	PF13536.1	gi|449066753|ref|YP_007433835.1|	-	0.38	10.9	5.6	0.17	12.0	2.5	1.5	1	1	0	1	1	1	0	Multidrug	resistance	efflux	transporter
CstA	PF02554.9	gi|449066753|ref|YP_007433835.1|	-	0.47	9.0	3.7	0.58	8.7	2.6	1.0	1	0	0	1	1	1	0	Carbon	starvation	protein	CstA
ATG22	PF11700.3	gi|449066753|ref|YP_007433835.1|	-	0.59	8.5	6.6	0.69	8.3	4.6	1.0	1	0	0	1	1	1	0	Vacuole	effluxer	Atg22	like
SdpI	PF13630.1	gi|449066753|ref|YP_007433835.1|	-	0.77	9.5	15.8	0.78	9.4	5.6	2.1	2	0	0	2	2	2	0	SdpI/YhfL	protein	family
DUF2659	PF10858.3	gi|449066753|ref|YP_007433835.1|	-	5.7	6.2	6.8	0.44	9.9	1.4	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2659)
ABC2_membrane	PF01061.19	gi|449066755|ref|YP_007433837.1|	-	7.6e-11	41.5	30.6	7.6e-11	41.5	21.2	1.8	2	0	0	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.2	gi|449066755|ref|YP_007433837.1|	-	2e-06	27.1	40.3	2e-06	27.1	27.9	2.2	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
ABC_tran	PF00005.22	gi|449066756|ref|YP_007433838.1|	-	6.1e-26	91.3	0.0	9e-26	90.8	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|449066756|ref|YP_007433838.1|	-	9.8e-13	48.6	5.4	6.6e-06	26.2	1.1	2.3	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|449066756|ref|YP_007433838.1|	-	6e-08	32.1	1.5	0.0052	16.0	0.0	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|449066756|ref|YP_007433838.1|	-	7e-06	25.3	0.3	0.011	14.7	0.0	2.1	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA_29	PF13555.1	gi|449066756|ref|YP_007433838.1|	-	4.1e-05	23.0	0.2	8.7e-05	21.9	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|449066756|ref|YP_007433838.1|	-	0.00018	21.9	0.5	0.0005	20.4	0.0	1.8	2	1	0	2	2	2	1	AAA	domain
AAA_13	PF13166.1	gi|449066756|ref|YP_007433838.1|	-	0.00049	18.7	0.0	0.00063	18.3	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|449066756|ref|YP_007433838.1|	-	0.00085	19.3	0.0	0.0017	18.3	0.0	1.5	1	0	0	1	1	1	1	AAA	ATPase	domain
DUF258	PF03193.11	gi|449066756|ref|YP_007433838.1|	-	0.0041	16.3	0.0	0.0069	15.5	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_22	PF13401.1	gi|449066756|ref|YP_007433838.1|	-	0.0059	16.7	0.0	0.0086	16.2	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
cobW	PF02492.14	gi|449066756|ref|YP_007433838.1|	-	0.0062	15.9	0.2	0.15	11.5	0.0	2.2	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_17	PF13207.1	gi|449066756|ref|YP_007433838.1|	-	0.0062	17.3	0.2	0.012	16.4	0.1	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|449066756|ref|YP_007433838.1|	-	0.0073	16.6	0.1	0.013	15.7	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|449066756|ref|YP_007433838.1|	-	0.0076	15.9	0.1	0.0088	15.7	0.1	1.3	1	0	0	1	1	1	1	Archaeal	ATPase
NACHT	PF05729.7	gi|449066756|ref|YP_007433838.1|	-	0.012	15.2	0.1	0.1	12.2	0.0	2.4	2	1	1	3	3	3	0	NACHT	domain
MMR_HSR1	PF01926.18	gi|449066756|ref|YP_007433838.1|	-	0.014	15.2	0.4	0.02	14.8	0.3	1.7	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
Miro	PF08477.8	gi|449066756|ref|YP_007433838.1|	-	0.019	15.4	0.0	0.043	14.3	0.0	1.6	1	0	0	1	1	1	0	Miro-like	protein
MobB	PF03205.9	gi|449066756|ref|YP_007433838.1|	-	0.027	14.1	0.1	0.082	12.6	0.0	1.8	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_25	PF13481.1	gi|449066756|ref|YP_007433838.1|	-	0.051	12.9	0.0	0.098	12.0	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Septin	PF00735.13	gi|449066756|ref|YP_007433838.1|	-	0.1	11.5	0.2	3.2	6.6	0.0	2.1	2	0	0	2	2	2	0	Septin
ABC_ATPase	PF09818.4	gi|449066756|ref|YP_007433838.1|	-	0.12	10.9	0.2	0.21	10.1	0.0	1.4	2	0	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
DUF3784	PF12650.2	gi|449066757|ref|YP_007433839.1|	-	7.9	6.5	14.3	0.46	10.4	0.1	2.6	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF3784)
HTH_45	PF14947.1	gi|449066758|ref|YP_007433840.1|	-	4.1e-05	23.2	0.2	7e-05	22.5	0.1	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_34	PF13601.1	gi|449066758|ref|YP_007433840.1|	-	0.0017	18.3	0.0	0.0023	17.9	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_24	PF13412.1	gi|449066758|ref|YP_007433840.1|	-	0.0054	16.1	0.0	0.019	14.3	0.0	1.9	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
DUF4364	PF14277.1	gi|449066758|ref|YP_007433840.1|	-	0.039	13.5	0.5	0.05	13.2	0.4	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4364)
DUF1322	PF07032.6	gi|449066760|ref|YP_007433842.1|	-	0.19	11.9	1.2	0.24	11.6	0.8	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1322)
NAD_binding_8	PF13450.1	gi|449066761|ref|YP_007433843.1|	-	0.00095	19.1	0.0	0.0036	17.2	0.0	2.0	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Brix	PF04427.13	gi|449066762|ref|YP_007433844.1|	-	0.064	12.9	0.3	0.13	11.8	0.1	1.5	2	0	0	2	2	2	0	Brix	domain
NA37	PF04245.8	gi|449066762|ref|YP_007433844.1|	-	0.071	12.4	0.2	0.24	10.6	0.0	1.8	1	1	0	2	2	2	0	37-kD	nucleoid-associated	bacterial	protein
zf-C2H2_4	PF13894.1	gi|449066763|ref|YP_007433845.1|	-	0.0029	17.8	0.1	0.0067	16.6	0.1	1.6	1	0	0	1	1	1	1	C2H2-type	zinc	finger
SIS	PF01380.17	gi|449066764|ref|YP_007433846.1|	-	1.6e-16	60.0	0.1	3.2e-16	59.1	0.1	1.4	1	0	0	1	1	1	1	SIS	domain
SIS_2	PF13580.1	gi|449066764|ref|YP_007433846.1|	-	2.1e-07	30.7	1.8	4.3e-05	23.2	0.2	2.3	1	1	1	2	2	2	2	SIS	domain
PRMT5	PF05185.11	gi|449066764|ref|YP_007433846.1|	-	0.072	12.0	0.8	0.9	8.3	0.1	2.1	1	1	1	2	2	2	0	PRMT5	arginine-N-methyltransferase
AAA_10	PF12846.2	gi|449066765|ref|YP_007433847.1|	-	1.9e-23	83.3	3.6	9.9e-23	81.0	2.5	2.0	1	1	0	1	1	1	1	AAA-like	domain
DUF853	PF05872.7	gi|449066765|ref|YP_007433847.1|	-	6.6e-07	28.0	0.0	0.0026	16.2	0.0	2.2	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
DUF87	PF01935.12	gi|449066765|ref|YP_007433847.1|	-	6.3e-05	22.8	2.4	6.3e-05	22.8	1.7	2.7	2	1	0	2	2	2	1	Domain	of	unknown	function	DUF87
FtsK_SpoIIIE	PF01580.13	gi|449066765|ref|YP_007433847.1|	-	0.00021	20.8	0.0	0.0051	16.3	0.0	2.2	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
T4SS-DNA_transf	PF02534.9	gi|449066765|ref|YP_007433847.1|	-	0.0093	14.5	0.1	0.027	13.0	0.0	1.7	2	0	0	2	2	2	1	Type	IV	secretory	system	Conjugative	DNA	transfer
AAA_22	PF13401.1	gi|449066765|ref|YP_007433847.1|	-	0.02	15.0	0.2	1.7	8.8	0.0	2.8	2	0	0	2	2	2	0	AAA	domain
TrwB_AAD_bind	PF10412.4	gi|449066765|ref|YP_007433847.1|	-	0.029	12.9	0.0	2.4	6.6	0.0	2.2	2	0	0	2	2	2	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
TraG-D_C	PF12696.2	gi|449066765|ref|YP_007433847.1|	-	0.053	13.3	0.0	0.12	12.2	0.0	1.6	1	0	0	1	1	1	0	TraM	recognition	site	of	TraD	and	TraG
AAA_25	PF13481.1	gi|449066765|ref|YP_007433847.1|	-	0.068	12.5	0.0	0.14	11.5	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_17	PF13207.1	gi|449066765|ref|YP_007433847.1|	-	0.073	13.8	6.0	0.75	10.6	1.3	3.6	3	1	0	3	3	3	0	AAA	domain
ResIII	PF04851.10	gi|449066765|ref|YP_007433847.1|	-	0.093	12.5	0.0	0.37	10.6	0.0	2.0	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
DUF2459	PF09601.5	gi|449066765|ref|YP_007433847.1|	-	0.095	12.3	0.0	0.32	10.6	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2459)
IstB_IS21	PF01695.12	gi|449066765|ref|YP_007433847.1|	-	0.11	11.8	0.0	0.38	10.1	0.0	1.9	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
Mpp10	PF04006.7	gi|449066766|ref|YP_007433848.1|	-	0.005	15.2	0.5	0.007	14.7	0.3	1.2	1	0	0	1	1	1	1	Mpp10	protein
Penicillinase_R	PF03965.11	gi|449066766|ref|YP_007433848.1|	-	0.054	13.5	0.4	0.096	12.7	0.0	1.7	2	0	0	2	2	2	0	Penicillinase	repressor
P63C	PF10546.4	gi|449066766|ref|YP_007433848.1|	-	0.11	12.4	1.4	0.73	9.8	0.1	2.6	2	1	1	3	3	3	0	P63C	domain
CX	PF01705.14	gi|449066766|ref|YP_007433848.1|	-	0.82	9.6	3.0	0.58	10.1	0.3	1.9	2	0	0	2	2	2	0	CX	module
Semialdhyde_dh	PF01118.19	gi|449066767|ref|YP_007433849.1|	-	1.2e-34	119.1	0.0	4.3e-34	117.4	0.0	1.9	2	0	0	2	2	2	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Semialdhyde_dhC	PF02774.13	gi|449066767|ref|YP_007433849.1|	-	6.8e-08	32.5	0.0	9.3e-08	32.1	0.0	1.2	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
F420_oxidored	PF03807.12	gi|449066767|ref|YP_007433849.1|	-	0.047	14.1	0.0	0.14	12.6	0.0	1.8	1	1	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
AA_kinase	PF00696.23	gi|449066768|ref|YP_007433850.1|	-	1.6e-28	99.8	2.6	1.9e-28	99.6	1.8	1.1	1	0	0	1	1	1	1	Amino	acid	kinase	family
HTH_AsnC-type	PF13404.1	gi|449066769|ref|YP_007433851.1|	-	1.8e-13	49.7	0.0	5.4e-13	48.2	0.1	1.7	2	0	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
AsnC_trans_reg	PF01037.16	gi|449066769|ref|YP_007433851.1|	-	2.1e-13	49.7	0.1	3.2e-13	49.1	0.0	1.3	1	0	0	1	1	1	1	AsnC	family
HTH_24	PF13412.1	gi|449066769|ref|YP_007433851.1|	-	1.1e-12	47.1	0.8	5.7e-12	44.8	0.2	2.0	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|449066769|ref|YP_007433851.1|	-	3.6e-06	26.5	1.9	5.7e-06	25.8	0.2	2.1	3	0	0	3	3	3	1	HTH	domain
MarR_2	PF12802.2	gi|449066769|ref|YP_007433851.1|	-	1.4e-05	24.6	0.0	2.8e-05	23.7	0.0	1.4	1	0	0	1	1	1	1	MarR	family
FeoC	PF09012.5	gi|449066769|ref|YP_007433851.1|	-	0.00044	19.9	0.1	0.00068	19.2	0.1	1.3	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
TrmB	PF01978.14	gi|449066769|ref|YP_007433851.1|	-	0.0008	19.0	0.0	0.0014	18.3	0.0	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.17	gi|449066769|ref|YP_007433851.1|	-	0.00081	19.0	0.1	0.0045	16.6	0.1	2.0	2	0	0	2	2	2	1	MarR	family
HTH_20	PF12840.2	gi|449066769|ref|YP_007433851.1|	-	0.0014	18.3	0.0	0.0023	17.7	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_Mga	PF08280.6	gi|449066769|ref|YP_007433851.1|	-	0.0015	18.2	0.1	0.0038	16.9	0.0	1.7	2	0	0	2	2	2	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
DUF2250	PF10007.4	gi|449066769|ref|YP_007433851.1|	-	0.0016	18.3	0.1	0.0029	17.4	0.1	1.5	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF4423	PF14394.1	gi|449066769|ref|YP_007433851.1|	-	0.0033	16.9	0.3	0.0052	16.3	0.2	1.4	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
HTH_DeoR	PF08220.7	gi|449066769|ref|YP_007433851.1|	-	0.0057	16.1	0.2	0.01	15.3	0.1	1.4	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
HTH_9	PF08221.6	gi|449066769|ref|YP_007433851.1|	-	0.013	15.3	0.1	0.026	14.3	0.0	1.5	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
HTH_27	PF13463.1	gi|449066769|ref|YP_007433851.1|	-	0.013	15.8	0.0	0.022	15.0	0.0	1.4	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
Rio2_N	PF09202.6	gi|449066769|ref|YP_007433851.1|	-	0.013	15.5	0.0	0.18	11.9	0.0	2.2	2	0	0	2	2	2	0	Rio2,	N-terminal
NapD	PF03927.8	gi|449066769|ref|YP_007433851.1|	-	0.014	15.2	0.1	0.028	14.2	0.1	1.5	1	1	0	1	1	1	0	NapD	protein
HTH_IclR	PF09339.5	gi|449066769|ref|YP_007433851.1|	-	0.015	14.9	0.0	0.029	13.9	0.0	1.4	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_5	PF01022.15	gi|449066769|ref|YP_007433851.1|	-	0.029	14.0	0.0	0.046	13.3	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
Fe_dep_repress	PF01325.14	gi|449066769|ref|YP_007433851.1|	-	0.031	14.1	0.1	0.069	13.1	0.0	1.6	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_34	PF13601.1	gi|449066769|ref|YP_007433851.1|	-	0.033	14.2	0.1	0.053	13.5	0.0	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
B-block_TFIIIC	PF04182.7	gi|449066769|ref|YP_007433851.1|	-	0.039	13.8	0.0	0.068	13.0	0.0	1.4	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
Mga	PF05043.8	gi|449066769|ref|YP_007433851.1|	-	0.049	13.9	0.1	0.088	13.0	0.0	1.4	1	0	0	1	1	1	0	Mga	helix-turn-helix	domain
Rrf2	PF02082.15	gi|449066769|ref|YP_007433851.1|	-	0.077	13.1	0.1	0.17	12.0	0.1	1.6	1	0	0	1	1	1	0	Transcriptional	regulator
PAX	PF00292.13	gi|449066769|ref|YP_007433851.1|	-	0.086	12.5	0.7	1.2	8.8	0.5	2.1	1	1	0	1	1	1	0	'Paired	box'	domain
Sigma70_r4_2	PF08281.7	gi|449066769|ref|YP_007433851.1|	-	0.088	12.2	0.2	0.32	10.4	0.2	1.9	1	1	0	1	1	1	0	Sigma-70,	region	4
zf-ribbon_3	PF13248.1	gi|449066770|ref|YP_007433852.1|	-	0.0044	16.1	0.7	0.072	12.3	0.1	2.1	2	0	0	2	2	2	1	zinc-ribbon	domain
Desulfoferrod_N	PF06397.7	gi|449066770|ref|YP_007433852.1|	-	0.012	14.9	0.8	0.068	12.5	0.1	2.2	2	1	0	2	2	2	0	Desulfoferrodoxin,	N-terminal	domain
zinc_ribbon_2	PF13240.1	gi|449066770|ref|YP_007433852.1|	-	0.015	14.8	0.7	1.3	8.5	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|449066770|ref|YP_007433852.1|	-	0.029	14.0	0.0	0.045	13.4	0.0	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|449066770|ref|YP_007433852.1|	-	0.032	13.8	0.0	0.049	13.2	0.0	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
Lar_restr_allev	PF14354.1	gi|449066770|ref|YP_007433852.1|	-	0.1	12.9	0.3	0.15	12.3	0.2	1.5	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
TF_Zn_Ribbon	PF08271.7	gi|449066770|ref|YP_007433852.1|	-	0.41	9.9	2.7	0.87	8.9	1.9	1.6	1	1	0	1	1	1	0	TFIIB	zinc-binding
DUF3797	PF12677.2	gi|449066770|ref|YP_007433852.1|	-	1	9.0	3.4	2.4	7.8	0.7	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3797)
RimK	PF08443.6	gi|449066771|ref|YP_007433853.1|	-	1.2e-46	158.6	0.0	2.9e-46	157.3	0.0	1.5	2	0	0	2	2	2	1	RimK-like	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|449066771|ref|YP_007433853.1|	-	1.5e-13	50.9	0.0	2.2e-13	50.3	0.0	1.1	1	0	0	1	1	1	1	ATP-grasp	domain
CPSase_L_D2	PF02786.12	gi|449066771|ref|YP_007433853.1|	-	3.8e-05	23.0	0.0	6.1e-05	22.3	0.0	1.3	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
ATP-grasp_3	PF02655.9	gi|449066771|ref|YP_007433853.1|	-	0.00012	21.9	0.0	0.00019	21.3	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_5	PF13549.1	gi|449066771|ref|YP_007433853.1|	-	0.00036	19.8	0.0	0.00076	18.7	0.0	1.5	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|449066771|ref|YP_007433853.1|	-	0.00037	19.3	0.0	0.00049	18.9	0.0	1.1	1	0	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp	PF02222.17	gi|449066771|ref|YP_007433853.1|	-	0.0081	15.5	0.0	0.014	14.7	0.0	1.4	1	1	0	1	1	1	1	ATP-grasp	domain
ADH_zinc_N	PF00107.21	gi|449066771|ref|YP_007433853.1|	-	0.011	15.2	0.0	0.064	12.7	0.0	2.1	2	0	0	2	2	2	0	Zinc-binding	dehydrogenase
ATP-grasp_2	PF08442.5	gi|449066771|ref|YP_007433853.1|	-	0.019	14.3	0.0	0.033	13.5	0.0	1.3	1	0	0	1	1	1	0	ATP-grasp	domain
Ins134_P3_kin	PF05770.6	gi|449066771|ref|YP_007433853.1|	-	0.087	11.8	0.2	2.2	7.1	0.0	2.2	1	1	1	2	2	2	0	Inositol	1,	3,	4-trisphosphate	5/6-kinase
Aminotran_3	PF00202.16	gi|449066772|ref|YP_007433854.1|	-	4.5e-104	347.9	0.0	7.2e-104	347.2	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class-III
Aminotran_1_2	PF00155.16	gi|449066772|ref|YP_007433854.1|	-	0.00033	19.7	0.0	0.00083	18.4	0.0	1.6	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Peptidase_M20	PF01546.23	gi|449066773|ref|YP_007433855.1|	-	1.6e-22	79.9	0.0	2.2e-22	79.4	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
Peptidase_M28	PF04389.12	gi|449066773|ref|YP_007433855.1|	-	0.00016	21.4	0.0	0.00024	20.9	0.0	1.3	1	0	0	1	1	1	1	Peptidase	family	M28
M20_dimer	PF07687.9	gi|449066773|ref|YP_007433855.1|	-	0.00029	20.5	0.0	0.00052	19.7	0.0	1.4	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Prenyltransf	PF01255.14	gi|449066774|ref|YP_007433856.1|	-	2.2e-73	246.1	0.2	2.5e-73	245.8	0.1	1.0	1	0	0	1	1	1	1	Putative	undecaprenyl	diphosphate	synthase
Fzo_mitofusin	PF04799.8	gi|449066774|ref|YP_007433856.1|	-	0.079	12.3	0.3	0.13	11.6	0.2	1.3	1	0	0	1	1	1	0	fzo-like	conserved	region
Ribosomal_S8e	PF01201.17	gi|449066775|ref|YP_007433857.1|	-	1.2e-38	132.2	0.7	1.3e-38	132.1	0.5	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S8e
SRP19	PF01922.12	gi|449066776|ref|YP_007433858.1|	-	0.00011	22.7	0.1	0.00019	21.9	0.1	1.4	1	1	0	1	1	1	1	SRP19	protein
DUF2326	PF10088.4	gi|449066776|ref|YP_007433858.1|	-	0.009	15.6	0.1	0.0096	15.5	0.1	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2326)
B-block_TFIIIC	PF04182.7	gi|449066776|ref|YP_007433858.1|	-	0.047	13.5	0.4	0.071	12.9	0.2	1.3	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
CD47	PF04549.9	gi|449066777|ref|YP_007433859.1|	-	0.37	10.7	13.7	0.33	10.9	6.0	2.0	1	1	1	2	2	2	0	CD47	transmembrane	region
UPF0182	PF03699.8	gi|449066777|ref|YP_007433859.1|	-	0.45	8.3	3.1	0.48	8.3	2.1	1.0	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0182)
DUF2207	PF09972.4	gi|449066777|ref|YP_007433859.1|	-	4	5.8	9.7	4.6	5.7	6.7	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
Epimerase	PF01370.16	gi|449066778|ref|YP_007433860.1|	-	1.8e-41	142.1	0.1	2.4e-41	141.6	0.0	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|449066778|ref|YP_007433860.1|	-	1.6e-17	63.3	0.0	2e-17	63.0	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
3Beta_HSD	PF01073.14	gi|449066778|ref|YP_007433860.1|	-	9.7e-13	47.4	0.2	1.3e-12	47.0	0.1	1.2	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
NAD_binding_4	PF07993.7	gi|449066778|ref|YP_007433860.1|	-	4.7e-12	45.3	0.1	5.6e-08	32.0	0.0	2.1	2	0	0	2	2	2	2	Male	sterility	protein
Polysacc_synt_2	PF02719.10	gi|449066778|ref|YP_007433860.1|	-	6.6e-08	31.8	1.2	2.1e-06	26.8	0.8	2.7	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_10	PF13460.1	gi|449066778|ref|YP_007433860.1|	-	0.00016	21.6	0.0	0.0016	18.4	0.0	2.4	1	1	1	2	2	2	1	NADH(P)-binding
NmrA	PF05368.8	gi|449066778|ref|YP_007433860.1|	-	0.00071	18.9	0.0	0.0014	17.9	0.0	1.4	1	0	0	1	1	1	1	NmrA-like	family
adh_short	PF00106.20	gi|449066778|ref|YP_007433860.1|	-	0.00074	19.4	0.0	0.0098	15.8	0.0	2.1	2	0	0	2	2	2	1	short	chain	dehydrogenase
KR	PF08659.5	gi|449066778|ref|YP_007433860.1|	-	0.0009	18.9	0.0	0.039	13.6	0.0	2.1	2	0	0	2	2	2	1	KR	domain
TPP_enzyme_M	PF00205.17	gi|449066779|ref|YP_007433861.1|	-	2.1e-37	127.9	0.0	6.3e-37	126.3	0.0	1.8	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	central	domain
TPP_enzyme_N	PF02776.13	gi|449066779|ref|YP_007433861.1|	-	8e-27	93.8	0.0	1.3e-26	93.0	0.0	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
PNTB	PF02233.11	gi|449066779|ref|YP_007433861.1|	-	0.022	13.5	0.0	0.041	12.6	0.0	1.4	1	0	0	1	1	1	0	NAD(P)	transhydrogenase	beta	subunit
ChuX_HutX	PF06228.8	gi|449066779|ref|YP_007433861.1|	-	0.053	12.8	0.1	0.18	11.1	0.0	1.9	2	0	0	2	2	2	0	Haem	utilisation	ChuX/HutX
DUF2204	PF09970.4	gi|449066780|ref|YP_007433862.1|	-	1.4e-65	220.1	4.3	1.5e-65	220.0	2.9	1.0	1	0	0	1	1	1	1	Nucleotidyl	transferase	of	unknown	function	(DUF2204)
ThylakoidFormat	PF11264.3	gi|449066780|ref|YP_007433862.1|	-	0.09	12.3	0.6	0.13	11.8	0.1	1.5	2	0	0	2	2	2	0	Thylakoid	formation	protein
Ribosomal_L40e	PF01020.12	gi|449066781|ref|YP_007433863.1|	-	3.1e-07	29.8	4.3	3.6e-07	29.6	3.0	1.2	1	0	0	1	1	1	1	Ribosomal	L40e	family
HypA	PF01155.14	gi|449066781|ref|YP_007433863.1|	-	0.014	15.1	0.3	0.015	15.0	0.2	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
DZR	PF12773.2	gi|449066781|ref|YP_007433863.1|	-	0.018	14.8	0.9	0.022	14.5	0.7	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
zf-tcix	PF14952.1	gi|449066781|ref|YP_007433863.1|	-	0.022	14.0	2.9	0.028	13.7	2.0	1.3	1	0	0	1	1	1	0	Putative	treble-clef,	zinc-finger,	Zn-binding
zf-ribbon_3	PF13248.1	gi|449066781|ref|YP_007433863.1|	-	0.024	13.8	0.2	0.033	13.4	0.1	1.2	1	0	0	1	1	1	0	zinc-ribbon	domain
DnaJ_CXXCXGXG	PF00684.14	gi|449066781|ref|YP_007433863.1|	-	0.028	14.4	0.6	0.033	14.2	0.4	1.1	1	0	0	1	1	1	0	DnaJ	central	domain
zinc_ribbon_2	PF13240.1	gi|449066781|ref|YP_007433863.1|	-	0.034	13.6	0.4	0.048	13.1	0.3	1.3	1	0	0	1	1	1	0	zinc-ribbon	domain
zf-RanBP	PF00641.13	gi|449066781|ref|YP_007433863.1|	-	0.054	12.6	2.3	0.075	12.1	1.6	1.2	1	0	0	1	1	1	0	Zn-finger	in	Ran	binding	protein	and	others
DNA_RNApol_7kD	PF03604.8	gi|449066781|ref|YP_007433863.1|	-	0.37	10.2	7.9	0.14	11.6	3.3	1.9	2	1	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Mu-like_Com	PF10122.4	gi|449066781|ref|YP_007433863.1|	-	0.39	9.8	7.1	0.42	9.6	0.1	2.1	1	1	1	2	2	2	0	Mu-like	prophage	protein	Com
Haem_bd	PF14376.1	gi|449066781|ref|YP_007433863.1|	-	0.4	10.3	4.3	0.29	10.8	0.4	1.9	1	1	1	2	2	2	0	Haem-binding	domain
zinc_ribbon_6	PF14599.1	gi|449066781|ref|YP_007433863.1|	-	0.41	10.4	4.0	0.86	9.4	2.8	1.6	1	1	0	1	1	1	0	Zinc-ribbon
Cytochrome_C7	PF14522.1	gi|449066781|ref|YP_007433863.1|	-	0.47	10.1	3.9	1.5	8.4	2.7	1.8	1	1	0	1	1	1	0	Cytochrome	c7
zf-C2H2_3	PF13878.1	gi|449066781|ref|YP_007433863.1|	-	0.58	9.7	4.7	1.1	8.8	0.1	2.1	1	1	1	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
Paired_CXXCH_1	PF09699.5	gi|449066781|ref|YP_007433863.1|	-	0.58	9.7	2.7	0.37	10.3	0.2	1.8	2	0	0	2	2	2	0	Doubled	CXXCH	motif	(Paired_CXXCH_1)
DUF35_N	PF12172.3	gi|449066781|ref|YP_007433863.1|	-	1.5	8.8	3.9	4.8	7.2	2.7	1.8	1	1	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
KH_5	PF13184.1	gi|449066782|ref|YP_007433864.1|	-	3.7e-09	36.2	0.1	7e-09	35.3	0.1	1.5	1	0	0	1	1	1	1	NusA-like	KH	domain
tRNA-synt_2	PF00152.15	gi|449066783|ref|YP_007433865.1|	-	2.9e-92	308.9	0.1	3.9e-92	308.6	0.1	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.20	gi|449066783|ref|YP_007433865.1|	-	4.7e-15	55.2	0.2	1.1e-14	54.0	0.2	1.7	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
TruD	PF01142.13	gi|449066784|ref|YP_007433866.1|	-	5.4e-43	147.1	0.2	8.1e-34	116.8	0.0	2.0	1	1	1	2	2	2	2	tRNA	pseudouridine	synthase	D	(TruD)
PTH2	PF01981.11	gi|449066785|ref|YP_007433867.1|	-	6.9e-46	154.7	0.3	7.7e-46	154.5	0.2	1.0	1	0	0	1	1	1	1	Peptidyl-tRNA	hydrolase	PTH2
TP_methylase	PF00590.15	gi|449066785|ref|YP_007433867.1|	-	0.013	15.2	0.3	0.041	13.5	0.0	1.7	1	1	1	2	2	2	0	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
DUF1610	PF07754.6	gi|449066786|ref|YP_007433868.1|	-	3.9e-16	58.7	18.4	6.1e-10	39.0	2.5	2.2	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF1610)
DZR	PF12773.2	gi|449066786|ref|YP_007433868.1|	-	1e-05	25.2	10.0	0.00043	20.0	3.8	2.4	1	1	1	2	2	2	2	Double	zinc	ribbon
OrfB_Zn_ribbon	PF07282.6	gi|449066786|ref|YP_007433868.1|	-	1.3e-05	24.7	8.2	7.4e-05	22.3	1.1	2.2	1	1	1	2	2	2	1	Putative	transposase	DNA-binding	domain
zf-ribbon_3	PF13248.1	gi|449066786|ref|YP_007433868.1|	-	3.3e-05	22.9	3.0	3.3e-05	22.9	2.1	3.2	2	2	0	2	2	2	1	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|449066786|ref|YP_007433868.1|	-	0.00026	20.3	14.1	0.089	12.3	0.1	4.0	3	1	0	3	3	3	1	zinc-ribbon	domain
Nudix_N_2	PF14803.1	gi|449066786|ref|YP_007433868.1|	-	0.00065	19.3	9.0	0.79	9.4	0.4	3.4	3	1	0	3	3	3	2	Nudix	N-terminal
A2L_zn_ribbon	PF08792.5	gi|449066786|ref|YP_007433868.1|	-	0.00076	18.8	16.0	0.0073	15.7	2.8	2.9	2	2	0	2	2	2	1	A2L	zinc	ribbon	domain
Auto_anti-p27	PF06677.7	gi|449066786|ref|YP_007433868.1|	-	0.0026	17.4	7.9	0.011	15.5	1.5	2.5	2	1	0	2	2	2	1	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
PhnA_Zn_Ribbon	PF08274.7	gi|449066786|ref|YP_007433868.1|	-	0.0042	16.8	6.5	0.33	10.7	0.2	3.2	3	0	0	3	3	3	1	PhnA	Zinc-Ribbon
ADK_lid	PF05191.9	gi|449066786|ref|YP_007433868.1|	-	0.0059	16.2	8.3	0.45	10.2	2.9	3.0	2	1	0	2	2	2	1	Adenylate	kinase,	active	site	lid
Prok-RING_1	PF14446.1	gi|449066786|ref|YP_007433868.1|	-	0.011	15.4	11.5	0.011	15.3	2.8	2.4	1	1	1	2	2	2	0	Prokaryotic	RING	finger	family	1
PolC_DP2	PF03833.8	gi|449066786|ref|YP_007433868.1|	-	0.012	13.3	3.2	0.014	13.0	2.2	1.0	1	0	0	1	1	1	0	DNA	polymerase	II	large	subunit	DP2
Rpr2	PF04032.11	gi|449066786|ref|YP_007433868.1|	-	0.013	15.4	8.6	0.26	11.2	5.9	2.4	1	1	0	1	1	1	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
zf-MYND	PF01753.13	gi|449066786|ref|YP_007433868.1|	-	0.013	15.3	2.2	0.013	15.3	1.5	2.0	1	1	1	2	2	2	0	MYND	finger
DUF1272	PF06906.6	gi|449066786|ref|YP_007433868.1|	-	0.014	15.2	8.1	0.38	10.6	0.4	2.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1272)
TerY-C	PF15616.1	gi|449066786|ref|YP_007433868.1|	-	0.018	14.9	0.5	0.018	14.9	0.4	2.1	1	1	1	2	2	2	0	TerY-C	metal	binding	domain
DUF35_N	PF12172.3	gi|449066786|ref|YP_007433868.1|	-	0.018	14.9	11.7	0.48	10.3	0.0	3.3	2	1	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
HypA	PF01155.14	gi|449066786|ref|YP_007433868.1|	-	0.021	14.5	0.9	0.021	14.5	0.7	2.1	1	1	1	2	2	2	0	Hydrogenase	expression/synthesis	hypA	family
tRNA-synt_1f	PF01921.13	gi|449066786|ref|YP_007433868.1|	-	0.026	13.2	0.1	0.027	13.1	0.1	1.1	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(K)
TF_Zn_Ribbon	PF08271.7	gi|449066786|ref|YP_007433868.1|	-	0.028	13.7	15.9	0.23	10.8	0.2	3.5	3	1	1	4	4	3	0	TFIIB	zinc-binding
zf-CHY	PF05495.7	gi|449066786|ref|YP_007433868.1|	-	0.042	13.9	0.2	0.042	13.9	0.1	2.2	1	1	1	2	2	2	0	CHY	zinc	finger
IBR	PF01485.16	gi|449066786|ref|YP_007433868.1|	-	0.053	13.4	8.6	0.81	9.5	5.9	2.1	1	1	0	1	1	1	0	IBR	domain
DUF164	PF02591.10	gi|449066786|ref|YP_007433868.1|	-	0.075	12.8	11.3	1.7	8.5	0.0	3.6	3	1	0	3	3	3	0	Putative	zinc	ribbon	domain
NinF	PF05810.7	gi|449066786|ref|YP_007433868.1|	-	0.089	12.6	0.3	0.089	12.6	0.2	2.7	1	1	1	2	2	2	0	NinF	protein
zf-UDP	PF14569.1	gi|449066786|ref|YP_007433868.1|	-	0.12	12.1	6.2	0.14	11.9	4.3	1.1	1	0	0	1	1	1	0	Zinc-binding	RING-finger
C1_1	PF00130.17	gi|449066786|ref|YP_007433868.1|	-	0.12	12.0	9.2	0.22	11.2	1.5	2.3	1	1	1	2	2	2	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
DRP	PF06044.7	gi|449066786|ref|YP_007433868.1|	-	0.13	11.2	1.3	0.12	11.3	0.9	1.1	1	0	0	1	1	1	0	Dam-replacing	family
UPF0547	PF10571.4	gi|449066786|ref|YP_007433868.1|	-	0.14	11.8	16.2	1.8	8.3	8.9	3.4	2	1	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zinc_ribbon_4	PF13717.1	gi|449066786|ref|YP_007433868.1|	-	0.14	11.8	8.5	6.3	6.5	0.0	3.8	4	0	0	4	4	4	0	zinc-ribbon	domain
zf-RING_3	PF14369.1	gi|449066786|ref|YP_007433868.1|	-	0.16	12.0	13.9	1.1	9.3	1.6	3.3	2	2	1	3	3	3	0	zinc-finger
Tnp_zf-ribbon_2	PF13842.1	gi|449066786|ref|YP_007433868.1|	-	0.16	12.4	13.8	0.31	11.4	2.4	3.0	2	1	1	3	3	3	0	DDE_Tnp_1-like	zinc-ribbon
Zn-ribbon_8	PF09723.5	gi|449066786|ref|YP_007433868.1|	-	0.16	11.9	14.6	0.86	9.6	3.5	3.5	1	1	3	4	4	4	0	Zinc	ribbon	domain
NOB1_Zn_bind	PF08772.6	gi|449066786|ref|YP_007433868.1|	-	0.17	11.7	10.0	0.084	12.7	2.2	2.2	1	1	1	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
FUR	PF01475.14	gi|449066786|ref|YP_007433868.1|	-	0.17	11.8	0.8	1.5	8.8	0.0	2.2	2	1	1	3	3	2	0	Ferric	uptake	regulator	family
zf-C2HC5	PF06221.8	gi|449066786|ref|YP_007433868.1|	-	0.17	11.6	10.1	0.06	13.1	2.1	2.4	1	1	1	2	2	2	0	Putative	zinc	finger	motif,	C2HC5-type
Zn_ribbon_recom	PF13408.1	gi|449066786|ref|YP_007433868.1|	-	0.29	11.4	10.6	7.6	6.8	5.3	2.3	2	0	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
NMD3	PF04981.8	gi|449066786|ref|YP_007433868.1|	-	0.34	10.0	9.3	1.4	7.9	6.6	1.9	1	1	1	2	2	2	0	NMD3	family
DUF2296	PF10058.4	gi|449066786|ref|YP_007433868.1|	-	0.35	10.6	16.6	1.2	8.8	2.5	3.6	2	2	0	2	2	2	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
PHD	PF00628.24	gi|449066786|ref|YP_007433868.1|	-	0.44	10.2	11.9	1.3	8.7	1.4	3.0	1	1	1	2	2	2	0	PHD-finger
zf-TFIIB	PF13453.1	gi|449066786|ref|YP_007433868.1|	-	0.45	9.7	13.7	57	3.0	9.5	2.8	1	1	1	2	2	2	0	Transcription	factor	zinc-finger
zinc_ribbon_5	PF13719.1	gi|449066786|ref|YP_007433868.1|	-	0.48	10.0	10.1	6.5	6.4	0.0	3.8	4	0	0	4	4	4	0	zinc-ribbon	domain
zf-B_box	PF00643.19	gi|449066786|ref|YP_007433868.1|	-	0.54	10.1	11.8	0.83	9.5	4.4	2.7	1	1	1	2	2	2	0	B-box	zinc	finger
Sgf11	PF08209.6	gi|449066786|ref|YP_007433868.1|	-	0.6	9.4	12.4	0.97	8.8	0.1	3.8	3	1	1	4	4	4	0	Sgf11	(transcriptional	regulation	protein)
Elf1	PF05129.8	gi|449066786|ref|YP_007433868.1|	-	0.85	9.3	7.6	15	5.3	3.3	2.4	1	1	1	2	2	2	0	Transcription	elongation	factor	Elf1	like
zf-FPG_IleRS	PF06827.9	gi|449066786|ref|YP_007433868.1|	-	0.85	9.3	7.8	2.4	7.8	1.7	2.7	2	1	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
Rubredoxin	PF00301.15	gi|449066786|ref|YP_007433868.1|	-	0.87	9.5	13.3	1.2	9.0	1.2	3.3	3	1	0	3	3	2	0	Rubredoxin
zinc-ribbons_6	PF07191.7	gi|449066786|ref|YP_007433868.1|	-	0.92	9.3	8.4	1.1	9.1	2.3	2.2	1	1	1	2	2	2	0	zinc-ribbons
zf-C3HC4_3	PF13920.1	gi|449066786|ref|YP_007433868.1|	-	0.98	9.1	13.3	2.2	8.0	4.3	2.8	1	1	1	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
Acetone_carb_G	PF08882.6	gi|449066786|ref|YP_007433868.1|	-	1.1	9.3	7.2	1.5	8.8	0.6	2.5	1	1	1	2	2	2	0	Acetone	carboxylase	gamma	subunit
zf-RING_5	PF14634.1	gi|449066786|ref|YP_007433868.1|	-	1.2	8.8	11.2	4.3	7.1	7.8	2.0	1	1	0	1	1	1	0	zinc-RING	finger	domain
DUF4206	PF13901.1	gi|449066786|ref|YP_007433868.1|	-	1.4	8.4	6.7	1.6	8.2	4.7	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4206)
Dynactin_p62	PF05502.8	gi|449066786|ref|YP_007433868.1|	-	1.5	7.5	9.7	0.67	8.6	5.6	1.3	1	1	0	1	1	1	0	Dynactin	p62	family
RNA_POL_M_15KD	PF02150.11	gi|449066786|ref|YP_007433868.1|	-	1.5	8.5	10.1	0.5	10.0	0.6	3.0	1	1	1	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
C1_3	PF07649.7	gi|449066786|ref|YP_007433868.1|	-	1.7	8.7	17.2	0.45	10.5	3.8	2.8	2	1	0	2	2	2	0	C1-like	domain
DUF2321	PF10083.4	gi|449066786|ref|YP_007433868.1|	-	1.7	8.1	4.5	3.5	7.1	1.5	2.1	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2321)
zf-IS66	PF13005.2	gi|449066786|ref|YP_007433868.1|	-	1.7	8.6	14.1	4.8	7.2	0.1	3.4	1	1	2	3	3	3	0	zinc-finger	binding	domain	of	transposase	IS66
zf-UBP	PF02148.14	gi|449066786|ref|YP_007433868.1|	-	1.8	8.7	7.3	4.7	7.3	0.6	2.6	2	1	1	3	3	3	0	Zn-finger	in	ubiquitin-hydrolases	and	other	protein
Chordopox_RPO7	PF05864.7	gi|449066786|ref|YP_007433868.1|	-	1.8	8.7	5.0	2	8.5	0.0	2.8	3	0	0	3	3	3	0	Chordopoxvirus	DNA-directed	RNA	polymerase	7	kDa	polypeptide	(RPO7)
Ribosomal_L37ae	PF01780.14	gi|449066786|ref|YP_007433868.1|	-	2.1	8.2	5.4	1.1	9.1	1.5	1.9	1	1	0	1	1	1	0	Ribosomal	L37ae	protein	family
zf-C4_Topoisom	PF01396.14	gi|449066786|ref|YP_007433868.1|	-	2.2	7.8	14.5	2.2	7.8	0.4	3.4	1	1	1	3	3	3	0	Topoisomerase	DNA	binding	C4	zinc	finger
zf-C2H2	PF00096.21	gi|449066786|ref|YP_007433868.1|	-	2.2	8.8	16.5	9.7	6.7	0.5	4.0	3	1	1	4	4	4	0	Zinc	finger,	C2H2	type
zf-NADH-PPase	PF09297.6	gi|449066786|ref|YP_007433868.1|	-	2.7	7.6	13.3	2.6	7.6	0.2	3.2	2	1	0	3	3	3	0	NADH	pyrophosphatase	zinc	ribbon	domain
LIM	PF00412.17	gi|449066786|ref|YP_007433868.1|	-	3	7.9	9.4	0.35	10.9	0.7	2.2	1	1	1	2	2	2	0	LIM	domain
zf-H2C2_2	PF13465.1	gi|449066786|ref|YP_007433868.1|	-	3.9	7.9	19.5	13	6.2	2.8	4.0	2	2	1	3	3	3	0	Zinc-finger	double	domain
Ribosomal_L40e	PF01020.12	gi|449066786|ref|YP_007433868.1|	-	4	7.1	7.4	18	4.9	0.0	2.4	2	1	0	2	2	2	0	Ribosomal	L40e	family
zf-DHHC	PF01529.15	gi|449066786|ref|YP_007433868.1|	-	4	6.7	6.1	7.3	5.9	4.2	1.6	1	1	0	1	1	1	0	DHHC	palmitoyltransferase
FYDLN_acid	PF09538.5	gi|449066786|ref|YP_007433868.1|	-	4.4	7.9	7.2	2.9e+02	2.0	5.0	2.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(FYDLN_acid)
DNA_ligase_ZBD	PF03119.11	gi|449066786|ref|YP_007433868.1|	-	4.5	7.0	12.0	0.67	9.7	0.5	3.2	3	0	0	3	3	3	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Ribosomal_S27e	PF01667.12	gi|449066786|ref|YP_007433868.1|	-	4.6	6.8	9.9	6.3	6.4	0.0	3.5	2	1	0	2	2	1	0	Ribosomal	protein	S27
zf-AN1	PF01428.11	gi|449066786|ref|YP_007433868.1|	-	4.7	7.1	11.6	25	4.8	1.7	2.9	2	1	1	3	3	3	0	AN1-like	Zinc	finger
FYVE_2	PF02318.11	gi|449066786|ref|YP_007433868.1|	-	4.8	7.1	6.8	7.3	6.5	4.7	1.3	1	1	0	1	1	1	0	FYVE-type	zinc	finger
Ribosomal_L32p	PF01783.18	gi|449066786|ref|YP_007433868.1|	-	7.2	6.8	11.4	3.6e+03	-1.8	7.9	3.2	1	1	0	1	1	0	0	Ribosomal	L32p	protein	family
RNHCP	PF12647.2	gi|449066786|ref|YP_007433868.1|	-	7.8	6.3	10.2	0.6	9.9	0.7	2.6	1	1	1	2	2	2	0	RNHCP	domain
zf-tcix	PF14952.1	gi|449066786|ref|YP_007433868.1|	-	8	5.8	12.2	9.3	5.6	0.2	3.1	3	0	0	3	3	3	0	Putative	treble-clef,	zinc-finger,	Zn-binding
Spt4	PF06093.8	gi|449066786|ref|YP_007433868.1|	-	8.2	6.3	7.1	0.58	10.0	0.2	2.1	1	1	1	2	2	2	0	Spt4/RpoE2	zinc	finger
Zn_Tnp_IS1595	PF12760.2	gi|449066786|ref|YP_007433868.1|	-	8.7	6.2	21.6	9	6.2	0.2	3.9	2	1	1	3	3	3	0	Transposase	zinc-ribbon	domain
CpXC	PF14353.1	gi|449066786|ref|YP_007433868.1|	-	10	6.1	10.2	27	4.7	0.9	3.2	1	1	2	3	3	3	0	CpXC	protein
EF1_GNE	PF00736.14	gi|449066787|ref|YP_007433869.1|	-	4.5e-23	80.7	0.1	4.9e-23	80.6	0.1	1.0	1	0	0	1	1	1	1	EF-1	guanine	nucleotide	exchange	domain
AAA	PF00004.24	gi|449066788|ref|YP_007433870.1|	-	1.3e-100	332.7	0.0	4.5e-49	166.0	0.0	2.5	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
CDC48_N	PF02359.13	gi|449066788|ref|YP_007433870.1|	-	3e-31	107.1	1.7	1.1e-30	105.4	0.6	2.4	2	0	0	2	2	2	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
RuvB_N	PF05496.7	gi|449066788|ref|YP_007433870.1|	-	3.7e-16	58.8	0.1	5.9e-08	32.0	0.0	2.8	2	1	1	3	3	3	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
CDC48_2	PF02933.12	gi|449066788|ref|YP_007433870.1|	-	8.1e-15	54.2	2.3	8.1e-15	54.2	1.6	2.2	2	0	0	2	2	2	1	Cell	division	protein	48	(CDC48),	domain	2
AAA_2	PF07724.9	gi|449066788|ref|YP_007433870.1|	-	1.1e-14	54.7	0.1	7.8e-07	29.1	0.0	3.1	3	0	0	3	3	3	2	AAA	domain	(Cdc48	subfamily)
AAA_22	PF13401.1	gi|449066788|ref|YP_007433870.1|	-	1.1e-13	51.4	0.9	0.0011	19.0	0.0	4.5	2	2	1	3	3	3	3	AAA	domain
AAA_16	PF13191.1	gi|449066788|ref|YP_007433870.1|	-	1.6e-12	47.8	0.0	9e-05	22.5	0.0	3.6	2	2	0	2	2	2	2	AAA	ATPase	domain
AAA_17	PF13207.1	gi|449066788|ref|YP_007433870.1|	-	2.3e-12	47.8	1.4	7.2e-06	26.8	0.0	3.7	4	1	0	4	4	2	2	AAA	domain
AAA_5	PF07728.9	gi|449066788|ref|YP_007433870.1|	-	3.3e-12	46.3	1.7	9.9e-05	22.0	0.1	4.3	3	2	0	3	3	2	2	AAA	domain	(dynein-related	subfamily)
AAA_33	PF13671.1	gi|449066788|ref|YP_007433870.1|	-	1.9e-11	44.0	0.0	0.00037	20.3	0.0	3.1	3	0	0	3	3	3	2	AAA	domain
AAA_14	PF13173.1	gi|449066788|ref|YP_007433870.1|	-	1.1e-10	41.4	0.0	0.00022	21.1	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
TIP49	PF06068.8	gi|449066788|ref|YP_007433870.1|	-	1.5e-10	40.3	0.0	7.9e-05	21.5	0.0	2.5	2	0	0	2	2	2	2	TIP49	C-terminus
Zeta_toxin	PF06414.7	gi|449066788|ref|YP_007433870.1|	-	3.1e-10	39.4	0.0	0.00091	18.3	0.0	3.2	3	0	0	3	3	3	2	Zeta	toxin
IstB_IS21	PF01695.12	gi|449066788|ref|YP_007433870.1|	-	1.5e-09	37.5	0.0	0.0015	17.9	0.0	2.8	3	0	0	3	3	3	2	IstB-like	ATP	binding	protein
Arch_ATPase	PF01637.13	gi|449066788|ref|YP_007433870.1|	-	4.3e-09	36.4	0.2	0.0036	17.0	0.0	4.5	2	2	1	3	3	3	1	Archaeal	ATPase
AAA_28	PF13521.1	gi|449066788|ref|YP_007433870.1|	-	4.4e-08	33.2	0.2	0.014	15.3	0.0	3.4	3	1	0	3	3	3	2	AAA	domain
AAA_18	PF13238.1	gi|449066788|ref|YP_007433870.1|	-	5.4e-08	33.2	0.2	0.007	16.6	0.0	3.1	3	0	0	3	3	2	2	AAA	domain
Mg_chelatase	PF01078.16	gi|449066788|ref|YP_007433870.1|	-	2.4e-07	30.1	0.6	0.0065	15.6	0.1	2.6	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
RNA_helicase	PF00910.17	gi|449066788|ref|YP_007433870.1|	-	1.2e-06	28.6	0.0	0.033	14.3	0.0	2.9	2	0	0	2	2	2	2	RNA	helicase
AAA_25	PF13481.1	gi|449066788|ref|YP_007433870.1|	-	1.4e-06	27.8	6.4	0.013	14.8	0.2	3.8	2	2	1	3	3	3	2	AAA	domain
AAA_19	PF13245.1	gi|449066788|ref|YP_007433870.1|	-	1.6e-06	27.7	0.7	0.041	13.6	0.1	3.0	2	0	0	2	2	2	2	Part	of	AAA	domain
Sigma54_activat	PF00158.21	gi|449066788|ref|YP_007433870.1|	-	1.9e-06	27.4	0.2	0.27	10.7	0.0	4.0	2	2	0	2	2	2	2	Sigma-54	interaction	domain
AAA_24	PF13479.1	gi|449066788|ref|YP_007433870.1|	-	5e-06	26.2	0.2	0.044	13.3	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
ABC_tran	PF00005.22	gi|449066788|ref|YP_007433870.1|	-	5.4e-06	26.7	0.0	0.13	12.6	0.0	2.7	2	1	0	2	2	2	2	ABC	transporter
NACHT	PF05729.7	gi|449066788|ref|YP_007433870.1|	-	6.3e-06	25.9	1.0	0.46	10.1	0.1	4.0	4	0	0	4	4	4	2	NACHT	domain
AAA_3	PF07726.6	gi|449066788|ref|YP_007433870.1|	-	6.8e-06	25.7	0.0	0.075	12.6	0.0	2.9	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sigma54_activ_2	PF14532.1	gi|449066788|ref|YP_007433870.1|	-	1.3e-05	25.3	0.0	0.11	12.4	0.0	2.6	2	0	0	2	2	2	2	Sigma-54	interaction	domain
DUF815	PF05673.8	gi|449066788|ref|YP_007433870.1|	-	1.8e-05	23.7	0.0	0.18	10.6	0.0	3.5	3	1	0	3	3	3	2	Protein	of	unknown	function	(DUF815)
NB-ARC	PF00931.17	gi|449066788|ref|YP_007433870.1|	-	9.1e-05	21.4	0.0	0.1	11.4	0.0	2.9	3	0	0	3	3	3	1	NB-ARC	domain
Bac_DnaA	PF00308.13	gi|449066788|ref|YP_007433870.1|	-	0.00013	21.7	0.0	0.056	13.0	0.0	3.1	2	2	0	3	3	2	1	Bacterial	dnaA	protein
Parvo_NS1	PF01057.12	gi|449066788|ref|YP_007433870.1|	-	0.00047	19.1	0.1	0.82	8.4	0.0	2.4	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
PhoH	PF02562.11	gi|449066788|ref|YP_007433870.1|	-	0.00047	19.4	0.1	0.17	11.1	0.0	2.5	2	0	0	2	2	2	1	PhoH-like	protein
KaiC	PF06745.8	gi|449066788|ref|YP_007433870.1|	-	0.00057	19.0	2.8	2.9	6.9	0.0	4.3	2	2	1	4	4	4	0	KaiC
AFG1_ATPase	PF03969.11	gi|449066788|ref|YP_007433870.1|	-	0.00063	18.6	0.0	0.87	8.3	0.0	2.9	3	0	0	3	3	3	2	AFG1-like	ATPase
UPF0079	PF02367.12	gi|449066788|ref|YP_007433870.1|	-	0.0025	17.4	0.0	2.1	7.9	0.0	2.6	2	0	0	2	2	2	1	Uncharacterised	P-loop	hydrolase	UPF0079
ATP-synt_ab	PF00006.20	gi|449066788|ref|YP_007433870.1|	-	0.0028	17.1	0.0	0.34	10.3	0.0	2.5	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
Vps4_C	PF09336.5	gi|449066788|ref|YP_007433870.1|	-	0.003	17.4	0.2	0.11	12.4	0.0	2.9	2	0	0	2	2	2	1	Vps4	C	terminal	oligomerisation	domain
NTPase_1	PF03266.10	gi|449066788|ref|YP_007433870.1|	-	0.0033	17.1	5.1	2.2	7.9	0.0	4.5	3	2	2	5	5	4	1	NTPase
Guanylate_kin	PF00625.16	gi|449066788|ref|YP_007433870.1|	-	0.0048	16.3	0.1	12	5.2	0.0	4.0	3	1	1	4	4	4	0	Guanylate	kinase
SKI	PF01202.17	gi|449066788|ref|YP_007433870.1|	-	0.0059	16.4	0.0	4	7.2	0.0	2.5	2	0	0	2	2	2	0	Shikimate	kinase
AAA_11	PF13086.1	gi|449066788|ref|YP_007433870.1|	-	0.012	15.2	0.0	1.5	8.3	0.0	2.6	2	1	0	2	2	2	0	AAA	domain
AAA_10	PF12846.2	gi|449066788|ref|YP_007433870.1|	-	0.013	14.9	1.4	4	6.7	0.1	3.3	2	2	0	3	3	3	0	AAA-like	domain
ResIII	PF04851.10	gi|449066788|ref|YP_007433870.1|	-	0.015	15.1	0.0	1	9.1	0.0	2.5	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
Viral_helicase1	PF01443.13	gi|449066788|ref|YP_007433870.1|	-	0.016	14.7	0.0	0.71	9.3	0.0	2.2	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
T2SE	PF00437.15	gi|449066788|ref|YP_007433870.1|	-	0.028	13.3	0.0	4.5	6.0	0.0	2.6	3	0	0	3	3	2	0	Type	II/IV	secretion	system	protein
DUF2075	PF09848.4	gi|449066788|ref|YP_007433870.1|	-	0.03	13.2	0.0	7.2	5.4	0.0	2.6	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
IPT	PF01745.11	gi|449066788|ref|YP_007433870.1|	-	0.033	13.3	0.2	1.2	8.2	0.1	2.3	2	0	0	2	2	2	0	Isopentenyl	transferase
AAA_23	PF13476.1	gi|449066788|ref|YP_007433870.1|	-	0.039	14.2	0.0	3.1	8.0	0.0	2.7	2	0	0	2	2	2	0	AAA	domain
AAA_29	PF13555.1	gi|449066788|ref|YP_007433870.1|	-	0.047	13.2	0.0	6.8	6.3	0.0	2.4	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
PduV-EutP	PF10662.4	gi|449066788|ref|YP_007433870.1|	-	0.052	13.0	0.0	11	5.4	0.0	2.5	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_30	PF13604.1	gi|449066788|ref|YP_007433870.1|	-	0.081	12.4	0.0	5	6.6	0.0	2.5	2	0	0	2	2	2	0	AAA	domain
KTI12	PF08433.5	gi|449066788|ref|YP_007433870.1|	-	0.09	11.9	0.0	13	4.8	0.0	2.5	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
Cullin_Nedd8	PF10557.4	gi|449066789|ref|YP_007433871.1|	-	0.0038	17.0	0.0	0.005	16.6	0.0	1.2	1	0	0	1	1	1	1	Cullin	protein	neddylation	domain
Methyltrn_RNA_3	PF02598.12	gi|449066789|ref|YP_007433871.1|	-	0.016	14.5	0.0	0.017	14.5	0.0	1.0	1	0	0	1	1	1	0	Putative	RNA	methyltransferase
EAP30	PF04157.11	gi|449066789|ref|YP_007433871.1|	-	0.029	13.5	0.2	0.034	13.3	0.2	1.0	1	0	0	1	1	1	0	EAP30/Vps36	family
XPG_I	PF00867.13	gi|449066790|ref|YP_007433872.1|	-	6.2e-26	90.2	0.0	1.5e-25	89.0	0.0	1.7	1	0	0	1	1	1	1	XPG	I-region
XPG_N	PF00752.12	gi|449066790|ref|YP_007433872.1|	-	1.8e-18	66.6	0.0	4.3e-18	65.4	0.0	1.7	1	0	0	1	1	1	1	XPG	N-terminal	domain
5_3_exonuc	PF01367.15	gi|449066790|ref|YP_007433872.1|	-	1.7e-05	24.9	0.2	1.7e-05	24.9	0.1	2.3	2	1	0	2	2	2	1	5'-3'	exonuclease,	C-terminal	SAM	fold
5_3_exonuc_N	PF02739.11	gi|449066790|ref|YP_007433872.1|	-	0.05	12.9	0.0	0.37	10.1	0.0	2.2	1	1	0	1	1	1	0	5'-3'	exonuclease,	N-terminal	resolvase-like	domain
HHH_2	PF12826.2	gi|449066790|ref|YP_007433872.1|	-	0.1	12.5	0.1	0.28	11.0	0.0	1.7	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
DUF3391	PF11871.3	gi|449066790|ref|YP_007433872.1|	-	0.12	12.5	1.6	0.25	11.5	0.1	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3391)
DUF2458	PF10454.4	gi|449066790|ref|YP_007433872.1|	-	0.24	11.2	5.0	0.091	12.6	0.4	2.5	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2458)
COG5	PF10392.4	gi|449066790|ref|YP_007433872.1|	-	0.8	9.6	5.6	0.15	12.0	0.7	2.1	3	0	0	3	3	3	0	Golgi	transport	complex	subunit	5
NAD_binding_7	PF13241.1	gi|449066791|ref|YP_007433873.1|	-	1.5e-25	89.4	0.0	2.1e-25	88.9	0.0	1.2	1	0	0	1	1	1	1	Putative	NAD(P)-binding
TrkA_N	PF02254.13	gi|449066791|ref|YP_007433873.1|	-	7.5e-06	25.9	0.0	1.2e-05	25.2	0.0	1.3	1	0	0	1	1	1	1	TrkA-N	domain
Ribosomal_S9	PF00380.14	gi|449066791|ref|YP_007433873.1|	-	0.087	13.0	0.0	0.21	11.8	0.0	1.6	2	0	0	2	2	2	0	Ribosomal	protein	S9/S16
GFO_IDH_MocA	PF01408.17	gi|449066791|ref|YP_007433873.1|	-	0.15	12.5	0.0	0.23	11.9	0.0	1.3	1	0	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
GlutR_N	PF05201.10	gi|449066792|ref|YP_007433874.1|	-	2.2e-33	114.9	0.1	4.9e-33	113.8	0.0	1.6	1	0	0	1	1	1	1	Glutamyl-tRNAGlu	reductase,	N-terminal	domain
GlutR_dimer	PF00745.15	gi|449066792|ref|YP_007433874.1|	-	1.2e-17	63.6	1.5	2.1e-17	62.9	1.0	1.4	1	0	0	1	1	1	1	Glutamyl-tRNAGlu	reductase,	dimerisation	domain
Shikimate_DH	PF01488.15	gi|449066792|ref|YP_007433874.1|	-	3.4e-14	53.1	0.3	8.7e-14	51.7	0.0	1.8	2	0	0	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
F420_oxidored	PF03807.12	gi|449066792|ref|YP_007433874.1|	-	1.2e-07	32.0	0.0	3.9e-07	30.4	0.0	1.9	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
ThiF	PF00899.16	gi|449066792|ref|YP_007433874.1|	-	0.00021	21.1	0.1	0.00079	19.2	0.0	2.1	2	0	0	2	2	2	1	ThiF	family
NAD_binding_2	PF03446.10	gi|449066792|ref|YP_007433874.1|	-	0.00027	20.8	0.0	0.00052	19.8	0.0	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
TrkA_N	PF02254.13	gi|449066792|ref|YP_007433874.1|	-	0.00054	19.9	0.0	0.0017	18.3	0.0	1.9	1	0	0	1	1	1	1	TrkA-N	domain
NAD_Gly3P_dh_N	PF01210.18	gi|449066792|ref|YP_007433874.1|	-	0.0008	19.1	0.0	0.002	17.8	0.0	1.7	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
NAD_binding_7	PF13241.1	gi|449066792|ref|YP_007433874.1|	-	0.0013	18.9	0.1	0.0052	17.0	0.0	2.0	2	0	0	2	2	2	1	Putative	NAD(P)-binding
Ldh_1_N	PF00056.18	gi|449066792|ref|YP_007433874.1|	-	0.0017	18.1	0.0	0.0033	17.2	0.0	1.5	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	NAD	binding	domain
GFO_IDH_MocA	PF01408.17	gi|449066792|ref|YP_007433874.1|	-	0.002	18.5	0.0	0.004	17.6	0.0	1.5	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
2-Hacid_dh_C	PF02826.14	gi|449066792|ref|YP_007433874.1|	-	0.0024	17.0	0.0	0.0043	16.2	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Saccharop_dh	PF03435.13	gi|449066792|ref|YP_007433874.1|	-	0.0036	16.3	0.0	0.0064	15.5	0.0	1.4	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
ApbA	PF02558.11	gi|449066792|ref|YP_007433874.1|	-	0.0037	16.7	0.0	0.0087	15.5	0.0	1.7	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
Pyr_redox	PF00070.22	gi|449066792|ref|YP_007433874.1|	-	0.027	14.8	0.1	0.39	11.1	0.0	2.6	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
DapB_N	PF01113.15	gi|449066792|ref|YP_007433874.1|	-	0.057	13.3	0.0	0.17	11.8	0.0	1.8	1	1	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
ALAD	PF00490.16	gi|449066793|ref|YP_007433875.1|	-	1.8e-140	467.4	0.7	2e-140	467.2	0.5	1.0	1	0	0	1	1	1	1	Delta-aminolevulinic	acid	dehydratase
ComA	PF02679.10	gi|449066793|ref|YP_007433875.1|	-	0.085	11.8	0.0	4.3	6.2	0.0	2.3	2	0	0	2	2	2	0	(2R)-phospho-3-sulfolactate	synthase	(ComA)
Aminotran_3	PF00202.16	gi|449066794|ref|YP_007433876.1|	-	7.1e-68	228.9	0.0	9.7e-68	228.4	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-III
Aminotran_1_2	PF00155.16	gi|449066794|ref|YP_007433876.1|	-	3.1e-06	26.4	0.0	4e-06	26.0	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Porphobil_deam	PF01379.15	gi|449066795|ref|YP_007433877.1|	-	3.5e-56	189.5	0.9	4.6e-56	189.1	0.6	1.1	1	0	0	1	1	1	1	Porphobilinogen	deaminase,	dipyromethane	cofactor	binding	domain
Porphobil_deamC	PF03900.10	gi|449066795|ref|YP_007433877.1|	-	6e-09	35.8	0.0	1.4e-08	34.6	0.0	1.7	1	0	0	1	1	1	1	Porphobilinogen	deaminase,	C-terminal	domain
HEM4	PF02602.10	gi|449066796|ref|YP_007433878.1|	-	5.9e-18	64.9	0.0	7.3e-18	64.6	0.0	1.1	1	0	0	1	1	1	1	Uroporphyrinogen-III	synthase	HemD
TIR	PF01582.15	gi|449066796|ref|YP_007433878.1|	-	0.15	11.5	0.5	0.35	10.3	0.3	1.6	1	1	0	1	1	1	0	TIR	domain
Phosphodiest	PF01663.17	gi|449066798|ref|YP_007433880.1|	-	9.3e-36	123.9	0.0	1e-17	64.5	0.0	2.1	2	0	0	2	2	2	2	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
PglZ	PF08665.7	gi|449066798|ref|YP_007433880.1|	-	0.00049	19.8	0.0	0.011	15.4	0.0	2.3	2	0	0	2	2	2	1	PglZ	domain
Sulfatase	PF00884.18	gi|449066798|ref|YP_007433880.1|	-	0.0019	17.4	0.0	0.021	14.0	0.0	2.5	3	0	0	3	3	3	1	Sulfatase
Peptidase_M23	PF01551.17	gi|449066798|ref|YP_007433880.1|	-	0.011	15.7	0.0	0.033	14.2	0.0	1.8	2	0	0	2	2	2	0	Peptidase	family	M23
Fer2_BFD	PF04324.10	gi|449066799|ref|YP_007433881.1|	-	2.6e-05	24.2	0.3	6e-05	23.0	0.2	1.7	1	0	0	1	1	1	1	BFD-like	[2Fe-2S]	binding	domain
DAO	PF01266.19	gi|449066799|ref|YP_007433881.1|	-	0.006	15.5	0.0	0.14	11.0	0.0	2.4	2	1	0	2	2	2	1	FAD	dependent	oxidoreductase
WD-3	PF09765.4	gi|449066799|ref|YP_007433881.1|	-	0.028	13.6	0.0	0.047	12.9	0.0	1.3	1	0	0	1	1	1	0	WD-repeat	region
DAO	PF01266.19	gi|449066800|ref|YP_007433882.1|	-	1.1e-48	165.9	0.0	1.3e-48	165.7	0.0	1.0	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
GIDA	PF01134.17	gi|449066800|ref|YP_007433882.1|	-	2.1e-06	26.8	0.4	6.8e-05	21.8	0.0	2.1	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
Pyr_redox_3	PF13738.1	gi|449066800|ref|YP_007433882.1|	-	7.5e-05	22.8	0.0	0.00018	21.6	0.0	1.6	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|449066800|ref|YP_007433882.1|	-	0.00018	21.4	0.0	0.0007	19.5	0.0	2.1	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.12	gi|449066800|ref|YP_007433882.1|	-	0.00031	19.9	0.2	0.0006	18.9	0.1	1.4	1	0	0	1	1	1	1	Thi4	family
NAD_binding_9	PF13454.1	gi|449066800|ref|YP_007433882.1|	-	0.0005	19.8	0.0	0.0069	16.1	0.0	2.1	2	0	0	2	2	2	1	FAD-NAD(P)-binding
Pyr_redox_2	PF07992.9	gi|449066800|ref|YP_007433882.1|	-	0.0016	18.3	0.0	1.2	8.9	0.0	2.2	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|449066800|ref|YP_007433882.1|	-	0.0057	15.7	0.1	0.009	15.1	0.1	1.3	1	0	0	1	1	1	1	FAD	binding	domain
FAD_binding_2	PF00890.19	gi|449066800|ref|YP_007433882.1|	-	0.0082	15.0	0.0	0.29	9.9	0.1	2.1	2	0	0	2	2	2	1	FAD	binding	domain
Shikimate_DH	PF01488.15	gi|449066800|ref|YP_007433882.1|	-	0.024	14.7	0.2	0.047	13.7	0.2	1.4	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
Pyr_redox	PF00070.22	gi|449066800|ref|YP_007433882.1|	-	0.039	14.3	0.1	0.27	11.6	0.0	2.2	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
ThiF	PF00899.16	gi|449066800|ref|YP_007433882.1|	-	0.073	12.8	0.0	0.13	12.1	0.0	1.4	1	0	0	1	1	1	0	ThiF	family
Lycopene_cycl	PF05834.7	gi|449066800|ref|YP_007433882.1|	-	0.077	11.9	0.0	0.25	10.2	0.0	1.7	2	0	0	2	2	2	0	Lycopene	cyclase	protein
Amino_oxidase	PF01593.19	gi|449066800|ref|YP_007433882.1|	-	0.096	11.7	0.0	1.3	8.0	0.0	2.2	2	0	0	2	2	2	0	Flavin	containing	amine	oxidoreductase
TrkA_N	PF02254.13	gi|449066800|ref|YP_007433882.1|	-	0.17	11.9	0.2	0.36	10.8	0.1	1.5	1	0	0	1	1	1	0	TrkA-N	domain
Lactamase_B_2	PF12706.2	gi|449066801|ref|YP_007433883.1|	-	2.3e-08	33.7	0.1	6.2e-08	32.4	0.0	1.7	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Uteroglobin	PF01099.12	gi|449066801|ref|YP_007433883.1|	-	0.016	14.9	0.1	14	5.5	0.0	3.3	3	0	0	3	3	3	0	Uteroglobin	family
Lactamase_B	PF00753.22	gi|449066801|ref|YP_007433883.1|	-	0.028	14.0	0.5	0.075	12.6	0.3	1.6	1	1	0	1	1	1	0	Metallo-beta-lactamase	superfamily
Methyltransf_24	PF13578.1	gi|449066801|ref|YP_007433883.1|	-	0.068	14.0	0.3	0.36	11.6	0.0	2.3	1	1	0	2	2	2	0	Methyltransferase	domain
DNA_ligase_A_M	PF01068.16	gi|449066802|ref|YP_007433884.1|	-	3.9e-60	202.6	1.0	6.7e-60	201.9	0.7	1.4	1	0	0	1	1	1	1	ATP	dependent	DNA	ligase	domain
DNA_ligase_A_N	PF04675.9	gi|449066802|ref|YP_007433884.1|	-	1.1e-51	175.1	1.9	3.1e-51	173.6	1.2	1.9	2	0	0	2	2	2	1	DNA	ligase	N	terminus
DNA_ligase_A_C	PF04679.10	gi|449066802|ref|YP_007433884.1|	-	3.1e-26	91.5	0.0	6.6e-26	90.5	0.0	1.6	1	0	0	1	1	1	1	ATP	dependent	DNA	ligase	C	terminal	region
Arc_PepC	PF06819.6	gi|449066802|ref|YP_007433884.1|	-	0.034	14.0	2.6	4.1	7.3	0.0	4.2	4	0	0	4	4	4	0	Archaeal	Peptidase	A24	C-terminal	Domain
DNA_ligase_OB_2	PF14743.1	gi|449066802|ref|YP_007433884.1|	-	0.073	12.7	0.4	3.4	7.3	0.0	2.8	3	0	0	3	3	3	0	DNA	ligase	OB-like	domain
dUTPase	PF00692.14	gi|449066803|ref|YP_007433885.1|	-	2.7e-24	85.0	0.0	3.4e-24	84.7	0.0	1.1	1	0	0	1	1	1	1	dUTPase
DCD	PF06559.6	gi|449066803|ref|YP_007433885.1|	-	5.6e-07	28.2	0.0	3.7e-06	25.5	0.0	2.2	1	1	0	1	1	1	1	2'-deoxycytidine	5'-triphosphate	deaminase	(DCD)
RHH_1	PF01402.16	gi|449066804|ref|YP_007433886.1|	-	0.00033	20.3	0.3	0.00033	20.3	0.2	2.7	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
Matrilin_ccoil	PF10393.4	gi|449066804|ref|YP_007433886.1|	-	0.023	14.0	2.1	0.07	12.5	0.7	2.4	1	1	1	2	2	2	0	Trimeric	coiled-coil	oligomerisation	domain	of	matrilin
DUF4346	PF14251.1	gi|449066804|ref|YP_007433886.1|	-	0.035	13.8	0.5	1.2	8.9	0.2	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4346)
SPX	PF03105.14	gi|449066804|ref|YP_007433886.1|	-	0.045	13.5	14.8	0.072	12.8	10.3	1.3	1	0	0	1	1	1	0	SPX	domain
DUF972	PF06156.8	gi|449066804|ref|YP_007433886.1|	-	0.3	11.4	9.8	0.27	11.6	2.9	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF972)
Phasin	PF05597.6	gi|449066804|ref|YP_007433886.1|	-	0.36	10.5	10.3	0.53	10.0	0.9	3.2	2	1	1	3	3	3	0	Poly(hydroxyalcanoate)	granule	associated	protein	(phasin)
Prominin	PF05478.6	gi|449066804|ref|YP_007433886.1|	-	0.66	7.4	6.1	0.15	9.5	1.9	1.5	2	0	0	2	2	2	0	Prominin
AcylCoA_dehyd_C	PF12186.3	gi|449066804|ref|YP_007433886.1|	-	0.9	9.4	4.8	0.44	10.4	0.6	2.2	2	0	0	2	2	2	0	Acyl-CoA	dehydrogenase	C	terminal
DUF1664	PF07889.7	gi|449066804|ref|YP_007433886.1|	-	0.97	9.2	4.7	0.39	10.5	0.6	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
RepA_C	PF04796.7	gi|449066804|ref|YP_007433886.1|	-	1.2	8.7	5.2	0.56	9.8	0.9	2.3	2	1	1	3	3	3	0	Plasmid	encoded	RepA	protein
GNT-I	PF03071.10	gi|449066804|ref|YP_007433886.1|	-	1.2	7.5	4.9	0.38	9.2	1.6	1.4	2	0	0	2	2	2	0	GNT-I	family
DUF607	PF04678.8	gi|449066804|ref|YP_007433886.1|	-	1.3	8.9	7.2	2.7	7.9	0.6	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF607
Ferritin-like	PF12902.2	gi|449066804|ref|YP_007433886.1|	-	1.5	8.3	7.6	0.46	10.0	2.5	1.9	1	1	1	2	2	2	0	Ferritin-like
RP-C_C	PF11800.3	gi|449066804|ref|YP_007433886.1|	-	2.3	7.8	9.9	3.8	7.1	6.8	1.5	1	1	0	1	1	1	0	Replication	protein	C	C-terminal	region
DUF2203	PF09969.4	gi|449066804|ref|YP_007433886.1|	-	3	8.0	10.5	1.2	9.3	2.2	2.6	1	1	1	2	2	2	0	Uncharacterized	conserved	protein	(DUF2203)
PspB	PF06667.7	gi|449066804|ref|YP_007433886.1|	-	3.6	7.5	8.1	3	7.8	0.9	3.3	3	1	0	3	3	3	0	Phage	shock	protein	B
DUF4355	PF14265.1	gi|449066804|ref|YP_007433886.1|	-	4.1	7.3	21.0	0.61	10.0	7.3	2.9	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4355)
DUF1764	PF08576.5	gi|449066804|ref|YP_007433886.1|	-	6.2	7.6	19.8	3.6	8.4	0.7	2.6	2	1	1	3	3	2	0	Eukaryotic	protein	of	unknown	function	(DUF1764)
Fib_alpha	PF08702.5	gi|449066804|ref|YP_007433886.1|	-	8.2	6.5	12.3	0.44	10.6	1.3	2.3	1	1	2	3	3	3	0	Fibrinogen	alpha/beta	chain	family
Allexi_40kDa	PF05549.6	gi|449066804|ref|YP_007433886.1|	-	8.3	5.6	8.3	2.3	7.4	2.3	2.1	1	1	1	2	2	2	0	Allexivirus	40kDa	protein
Thioredoxin_3	PF13192.1	gi|449066805|ref|YP_007433887.1|	-	1.2e-28	98.7	1.5	1.4e-16	60.0	1.0	2.3	2	0	0	2	2	2	2	Thioredoxin	domain
Thioredoxin	PF00085.15	gi|449066805|ref|YP_007433887.1|	-	3.1e-05	23.6	0.8	0.0048	16.5	0.2	2.3	2	0	0	2	2	2	2	Thioredoxin
Thioredoxin_2	PF13098.1	gi|449066805|ref|YP_007433887.1|	-	3.1e-05	24.1	6.7	0.03	14.5	0.5	3.9	2	2	0	2	2	2	2	Thioredoxin-like	domain
Glutaredoxin	PF00462.19	gi|449066805|ref|YP_007433887.1|	-	0.0004	20.3	4.8	0.16	11.9	1.1	3.2	2	2	0	2	2	2	2	Glutaredoxin
Thioredoxin_7	PF13899.1	gi|449066805|ref|YP_007433887.1|	-	0.0031	17.4	0.4	0.31	11.0	0.0	2.5	2	0	0	2	2	2	1	Thioredoxin-like
DUF836	PF05768.9	gi|449066805|ref|YP_007433887.1|	-	0.0039	17.4	0.2	3.2	8.0	0.0	2.4	2	0	0	2	2	2	2	Glutaredoxin-like	domain	(DUF836)
Thioredoxin_8	PF13905.1	gi|449066805|ref|YP_007433887.1|	-	0.006	16.6	0.0	3.4	7.8	0.0	3.1	2	1	0	2	2	2	1	Thioredoxin-like
PDDEXK_1	PF12705.2	gi|449066805|ref|YP_007433887.1|	-	0.0087	15.4	0.1	0.78	9.0	0.0	2.2	2	0	0	2	2	2	1	PD-(D/E)XK	nuclease	superfamily
TrbC_Ftype	PF09673.5	gi|449066805|ref|YP_007433887.1|	-	0.015	14.8	0.1	1	9.0	0.0	2.4	2	0	0	2	2	2	0	Type-F	conjugative	transfer	system	pilin	assembly	protein
Thioredoxin_4	PF13462.1	gi|449066805|ref|YP_007433887.1|	-	0.024	14.6	7.7	0.5	10.3	0.1	3.7	2	2	2	4	4	4	0	Thioredoxin
DSBA	PF01323.15	gi|449066805|ref|YP_007433887.1|	-	0.15	11.5	1.1	2.3	7.7	0.0	2.7	2	2	0	3	3	3	0	DSBA-like	thioredoxin	domain
AMMECR1	PF01871.12	gi|449066806|ref|YP_007433888.1|	-	1.5e-57	193.4	0.0	1.8e-57	193.2	0.0	1.0	1	0	0	1	1	1	1	AMMECR1
Mut7-C	PF01927.11	gi|449066807|ref|YP_007433889.1|	-	2.6e-39	134.5	8.2	6.7e-38	129.9	5.7	2.0	1	1	0	1	1	1	1	Mut7-C	RNAse	domain
E6	PF00518.12	gi|449066807|ref|YP_007433889.1|	-	0.0071	16.6	1.6	0.011	16.0	1.1	1.3	1	0	0	1	1	1	1	Early	Protein	(E6)
C1_1	PF00130.17	gi|449066807|ref|YP_007433889.1|	-	0.049	13.3	1.5	0.088	12.5	1.0	1.4	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
OrfB_Zn_ribbon	PF07282.6	gi|449066807|ref|YP_007433889.1|	-	0.072	12.7	4.0	0.14	11.8	2.2	1.9	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
Mu-like_Com	PF10122.4	gi|449066807|ref|YP_007433889.1|	-	0.16	11.0	2.9	0.35	9.9	2.0	1.5	1	0	0	1	1	1	0	Mu-like	prophage	protein	Com
Rep_fac-A_C	PF08646.5	gi|449066807|ref|YP_007433889.1|	-	0.49	10.1	7.5	0.39	10.4	4.5	1.4	1	1	0	1	1	1	0	Replication	factor-A	C	terminal	domain
PHD_2	PF13831.1	gi|449066807|ref|YP_007433889.1|	-	1	8.7	8.3	0.2	11.0	2.5	2.1	2	0	0	2	2	2	0	PHD-finger
A2L_zn_ribbon	PF08792.5	gi|449066807|ref|YP_007433889.1|	-	2.6	7.6	5.5	12	5.5	0.2	2.6	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
PgaD	PF13994.1	gi|449066808|ref|YP_007433890.1|	-	0.28	10.6	3.9	0.34	10.3	2.7	1.1	1	0	0	1	1	1	0	PgaD-like	protein
COPI_assoc	PF08507.5	gi|449066808|ref|YP_007433890.1|	-	1.2	8.8	11.2	1.8	8.2	7.8	1.3	1	1	0	1	1	1	0	COPI	associated	protein
DUF308	PF03729.8	gi|449066808|ref|YP_007433890.1|	-	3.6	7.6	12.3	5.5	7.0	8.5	1.3	1	1	0	1	1	1	0	Short	repeat	of	unknown	function	(DUF308)
FbpA	PF05833.6	gi|449066809|ref|YP_007433891.1|	-	2.5e-33	115.3	20.8	3.9e-33	114.7	14.4	1.3	1	0	0	1	1	1	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
DUF814	PF05670.8	gi|449066809|ref|YP_007433891.1|	-	5.7e-25	87.0	0.2	1.8e-24	85.4	0.0	2.0	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF814)
Tektin	PF03148.9	gi|449066809|ref|YP_007433891.1|	-	0.02	13.4	9.9	0.041	12.4	6.8	1.5	1	1	0	1	1	1	0	Tektin	family
Apolipoprotein	PF01442.13	gi|449066809|ref|YP_007433891.1|	-	0.041	13.3	4.4	0.87	9.0	0.5	2.3	2	0	0	2	2	2	0	Apolipoprotein	A1/A4/E	domain
Fib_alpha	PF08702.5	gi|449066809|ref|YP_007433891.1|	-	0.22	11.6	12.3	1.7	8.7	6.4	2.7	1	1	1	2	2	2	0	Fibrinogen	alpha/beta	chain	family
Glyco_trans_1_2	PF13524.1	gi|449066809|ref|YP_007433891.1|	-	0.26	11.5	1.9	5.2	7.4	0.0	3.8	3	2	0	3	3	3	0	Glycosyl	transferases	group	1
PspA_IM30	PF04012.7	gi|449066809|ref|YP_007433891.1|	-	0.64	9.3	13.4	0.33	10.2	1.8	2.4	2	0	0	2	2	2	0	PspA/IM30	family
Syntaxin-6_N	PF09177.6	gi|449066809|ref|YP_007433891.1|	-	0.82	10.1	13.5	1.6	9.1	0.3	3.1	3	0	0	3	3	2	0	Syntaxin	6,	N-terminal
AKNA	PF12443.3	gi|449066809|ref|YP_007433891.1|	-	0.86	9.6	5.4	4	7.4	0.1	2.7	3	0	0	3	3	3	0	AT-hook-containing	transcription	factor
DUF4164	PF13747.1	gi|449066809|ref|YP_007433891.1|	-	2.9	8.1	9.9	7.4	6.7	1.0	3.5	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF4164)
DUF607	PF04678.8	gi|449066809|ref|YP_007433891.1|	-	4.9	7.0	8.7	3.4	7.5	1.4	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function,	DUF607
Uds1	PF15456.1	gi|449066809|ref|YP_007433891.1|	-	9.1	6.2	10.0	5.1	7.1	0.6	2.6	3	0	0	3	3	3	0	Up-regulated	During	Septation
RIO1	PF01163.17	gi|449066810|ref|YP_007433892.1|	-	5e-35	120.5	0.1	6.8e-35	120.1	0.1	1.2	1	0	0	1	1	1	1	RIO1	family
Rio2_N	PF09202.6	gi|449066810|ref|YP_007433892.1|	-	0.0001	22.3	0.1	0.00022	21.2	0.1	1.6	1	0	0	1	1	1	1	Rio2,	N-terminal
Pkinase	PF00069.20	gi|449066810|ref|YP_007433892.1|	-	0.0014	17.8	0.1	0.0022	17.2	0.1	1.3	1	0	0	1	1	1	1	Protein	kinase	domain
APH	PF01636.18	gi|449066810|ref|YP_007433892.1|	-	0.0027	17.4	0.0	0.0061	16.3	0.0	1.5	1	1	1	2	2	2	1	Phosphotransferase	enzyme	family
HTH_5	PF01022.15	gi|449066810|ref|YP_007433892.1|	-	0.0043	16.6	0.8	0.011	15.3	0.3	1.9	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_Mga	PF08280.6	gi|449066810|ref|YP_007433892.1|	-	0.03	14.0	1.2	0.1	12.3	0.4	2.2	2	0	0	2	2	2	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
Choline_kinase	PF01633.15	gi|449066810|ref|YP_007433892.1|	-	0.04	13.4	1.2	0.15	11.6	0.7	2.1	1	1	0	1	1	1	0	Choline/ethanolamine	kinase
DUF460	PF04312.8	gi|449066811|ref|YP_007433893.1|	-	3.7e-51	172.2	0.3	7.1e-51	171.3	0.2	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF460)
BRCT	PF00533.21	gi|449066811|ref|YP_007433893.1|	-	0.029	14.5	0.6	4.1	7.6	0.0	3.8	3	1	1	4	4	4	0	BRCA1	C	Terminus	(BRCT)	domain
SlyX	PF04102.7	gi|449066811|ref|YP_007433893.1|	-	0.048	14.0	7.3	0.21	11.9	1.5	2.7	2	0	0	2	2	2	0	SlyX
V-SNARE	PF05008.10	gi|449066811|ref|YP_007433893.1|	-	0.083	13.0	14.7	1.8	8.7	0.1	4.9	4	0	0	4	4	4	0	Vesicle	transport	v-SNARE	protein	N-terminus
Nab2	PF11517.3	gi|449066811|ref|YP_007433893.1|	-	0.095	12.7	1.2	0.27	11.3	0.8	1.8	1	0	0	1	1	1	0	Nuclear	abundant	poly(A)	RNA-bind	protein	2	(Nab2)
Pox_A_type_inc	PF04508.7	gi|449066811|ref|YP_007433893.1|	-	0.14	12.0	3.7	2.8	7.9	2.6	3.4	1	0	0	1	1	1	0	Viral	A-type	inclusion	protein	repeat
DUF972	PF06156.8	gi|449066811|ref|YP_007433893.1|	-	9.7	6.5	9.8	5.5	7.3	3.6	2.8	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF972)
AdoMet_Synthase	PF01941.14	gi|449066812|ref|YP_007433894.1|	-	3.1e-171	569.2	4.9	3.6e-171	569.0	3.4	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	synthetase	(AdoMet	synthetase)
LSM	PF01423.17	gi|449066813|ref|YP_007433895.1|	-	5.8e-20	70.6	0.1	7e-20	70.3	0.1	1.1	1	0	0	1	1	1	1	LSM	domain
SM-ATX	PF14438.1	gi|449066813|ref|YP_007433895.1|	-	0.051	13.5	0.0	0.067	13.1	0.0	1.2	1	0	0	1	1	1	0	Ataxin	2	SM	domain
HTH_5	PF01022.15	gi|449066814|ref|YP_007433896.1|	-	2.2e-12	46.4	0.1	4e-12	45.5	0.1	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|449066814|ref|YP_007433896.1|	-	5.9e-10	38.8	0.0	8.3e-10	38.3	0.0	1.1	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|449066814|ref|YP_007433896.1|	-	1.3e-08	34.0	0.0	1.9e-08	33.5	0.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.17	gi|449066814|ref|YP_007433896.1|	-	7.7e-08	31.9	0.1	1.3e-07	31.2	0.1	1.4	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.2	gi|449066814|ref|YP_007433896.1|	-	3.7e-07	29.7	0.0	5.3e-07	29.2	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_34	PF13601.1	gi|449066814|ref|YP_007433896.1|	-	6.3e-07	29.3	0.2	9.8e-07	28.7	0.1	1.5	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|449066814|ref|YP_007433896.1|	-	4.3e-06	26.3	0.1	7.2e-06	25.6	0.1	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_27	PF13463.1	gi|449066814|ref|YP_007433896.1|	-	8.8e-05	22.7	0.0	0.00015	22.0	0.0	1.4	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_Crp_2	PF13545.1	gi|449066814|ref|YP_007433896.1|	-	0.00065	19.4	0.0	0.0011	18.6	0.0	1.6	1	1	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_11	PF08279.7	gi|449066814|ref|YP_007433896.1|	-	0.0029	17.2	0.0	0.0044	16.6	0.0	1.3	1	0	0	1	1	1	1	HTH	domain
Fe_dep_repress	PF01325.14	gi|449066814|ref|YP_007433896.1|	-	0.0043	16.9	0.0	0.0078	16.1	0.0	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_IclR	PF09339.5	gi|449066814|ref|YP_007433896.1|	-	0.0044	16.5	0.0	0.007	15.9	0.0	1.4	1	1	0	1	1	1	1	IclR	helix-turn-helix	domain
DUF742	PF05331.6	gi|449066814|ref|YP_007433896.1|	-	0.0044	16.5	0.0	0.0052	16.3	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF742)
ArsR	PF09824.4	gi|449066814|ref|YP_007433896.1|	-	0.0081	15.4	0.1	0.0094	15.2	0.0	1.0	1	0	0	1	1	1	1	ArsR	transcriptional	regulator
DUF2250	PF10007.4	gi|449066814|ref|YP_007433896.1|	-	0.021	14.7	0.4	0.027	14.3	0.3	1.3	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Phage_rep_org_N	PF09681.5	gi|449066814|ref|YP_007433896.1|	-	0.023	14.2	0.3	0.12	11.9	0.1	1.8	1	1	1	2	2	2	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
TFIIE_alpha	PF02002.12	gi|449066814|ref|YP_007433896.1|	-	0.033	13.6	0.3	0.067	12.7	0.2	1.6	1	1	1	2	2	2	0	TFIIE	alpha	subunit
PadR	PF03551.9	gi|449066814|ref|YP_007433896.1|	-	0.033	13.9	0.0	0.055	13.2	0.0	1.4	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
Rrf2	PF02082.15	gi|449066814|ref|YP_007433896.1|	-	0.035	14.2	0.2	0.047	13.8	0.1	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_1	PF00126.22	gi|449066814|ref|YP_007433896.1|	-	0.04	13.6	0.0	0.057	13.1	0.0	1.2	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
DUF2513	PF10711.4	gi|449066814|ref|YP_007433896.1|	-	0.042	13.9	0.0	0.046	13.8	0.0	1.2	1	0	0	1	1	1	0	Hypothetical	protein	(DUF2513)
DUF4423	PF14394.1	gi|449066814|ref|YP_007433896.1|	-	0.067	12.7	0.2	0.13	11.8	0.2	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
Cdc6_C	PF09079.6	gi|449066814|ref|YP_007433896.1|	-	0.071	12.8	0.1	0.15	11.8	0.0	1.6	1	1	0	1	1	1	0	CDC6,	C	terminal
GntR	PF00392.16	gi|449066814|ref|YP_007433896.1|	-	0.083	12.3	0.0	0.12	11.8	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
Sulfolobus_pRN	PF05584.6	gi|449066814|ref|YP_007433896.1|	-	0.096	12.6	0.1	0.13	12.2	0.0	1.3	1	0	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
HTH_36	PF13730.1	gi|449066814|ref|YP_007433896.1|	-	0.13	12.4	0.0	0.22	11.6	0.0	1.6	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_41	PF14502.1	gi|449066814|ref|YP_007433896.1|	-	0.13	11.9	0.1	0.29	10.7	0.0	1.7	1	1	1	2	2	2	0	Helix-turn-helix	domain
CTP_synth_N	PF06418.9	gi|449066815|ref|YP_007433897.1|	-	5e-126	419.4	2.0	7e-126	418.9	1.4	1.2	1	0	0	1	1	1	1	CTP	synthase	N-terminus
GATase	PF00117.23	gi|449066815|ref|YP_007433897.1|	-	5.1e-51	172.8	0.0	8.6e-51	172.1	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|449066815|ref|YP_007433897.1|	-	1.1e-11	44.6	0.0	2e-11	43.7	0.0	1.4	1	0	0	1	1	1	1	Peptidase	C26
CbiA	PF01656.18	gi|449066815|ref|YP_007433897.1|	-	2.4e-07	30.3	0.2	4.1e-07	29.5	0.1	1.6	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ArsA_ATPase	PF02374.10	gi|449066815|ref|YP_007433897.1|	-	0.025	13.6	1.2	1.7	7.6	0.1	2.4	2	1	0	2	2	2	0	Anion-transporting	ATPase
OMPdecase	PF00215.19	gi|449066816|ref|YP_007433898.1|	-	5.5e-19	68.4	4.9	1e-18	67.5	3.4	1.4	1	1	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
QRPTase_C	PF01729.14	gi|449066816|ref|YP_007433898.1|	-	0.0031	17.0	1.6	0.0067	15.9	0.8	1.9	1	1	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
Ribul_P_3_epim	PF00834.14	gi|449066816|ref|YP_007433898.1|	-	0.012	14.7	1.1	0.021	13.9	0.1	1.9	2	1	0	2	2	2	0	Ribulose-phosphate	3	epimerase	family
HDPD	PF02924.9	gi|449066816|ref|YP_007433898.1|	-	0.14	11.9	1.8	0.53	10.0	1.3	1.9	1	1	0	1	1	1	0	Bacteriophage	lambda	head	decoration	protein	D
DUF1128	PF06569.6	gi|449066817|ref|YP_007433899.1|	-	0.31	10.7	5.8	0.71	9.6	0.0	3.1	4	1	0	4	4	4	0	Protein	of	unknown	function	(DUF1128)
DUF2153	PF09921.4	gi|449066818|ref|YP_007433900.1|	-	6.1e-53	177.7	5.3	7e-53	177.5	3.7	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2153)
AATF-Che1	PF13339.1	gi|449066818|ref|YP_007433900.1|	-	0.034	14.2	2.6	0.087	12.9	0.1	2.0	1	1	1	2	2	2	0	Apoptosis	antagonizing	transcription	factor
TAP42	PF04177.7	gi|449066818|ref|YP_007433900.1|	-	0.061	12.2	1.3	0.063	12.2	0.9	1.1	1	0	0	1	1	1	0	TAP42-like	family
OSCP	PF00213.13	gi|449066818|ref|YP_007433900.1|	-	0.1	12.4	0.2	0.23	11.2	0.0	1.7	1	1	1	2	2	2	0	ATP	synthase	delta	(OSCP)	subunit
Cbl_N	PF02262.11	gi|449066818|ref|YP_007433900.1|	-	0.16	11.7	0.9	0.55	9.9	0.2	2.0	2	1	0	2	2	2	0	CBL	proto-oncogene	N-terminal	domain	1
zf-CpG_bind_C	PF12269.3	gi|449066818|ref|YP_007433900.1|	-	0.23	10.9	1.9	0.64	9.4	0.1	1.9	1	1	1	2	2	2	0	CpG	binding	protein	zinc	finger	C	terminal	domain
DUF4248	PF14053.1	gi|449066818|ref|YP_007433900.1|	-	0.29	10.7	2.3	1.8	8.2	0.1	2.6	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4248)
Trm112p	PF03966.11	gi|449066819|ref|YP_007433901.1|	-	5.9e-17	61.7	2.9	9.8e-17	61.0	2.0	1.4	1	0	0	1	1	1	1	Trm112p-like	protein
zf-UDP	PF14569.1	gi|449066819|ref|YP_007433901.1|	-	0.0088	15.7	0.6	0.0088	15.7	0.4	1.9	1	1	1	2	2	2	1	Zinc-binding	RING-finger
zf-RING_5	PF14634.1	gi|449066819|ref|YP_007433901.1|	-	1.5	8.6	4.9	6	6.6	0.6	2.6	2	0	0	2	2	2	0	zinc-RING	finger	domain
Sgf11	PF08209.6	gi|449066819|ref|YP_007433901.1|	-	1.5	8.1	4.9	1.5	8.2	0.1	2.7	3	0	0	3	3	3	0	Sgf11	(transcriptional	regulation	protein)
zf-ribbon_3	PF13248.1	gi|449066819|ref|YP_007433901.1|	-	2.5	7.4	6.4	1.7	7.9	0.7	2.6	3	0	0	3	3	3	0	zinc-ribbon	domain
DZR	PF12773.2	gi|449066819|ref|YP_007433901.1|	-	4.9	7.0	7.3	24	4.8	5.1	2.1	1	1	0	1	1	1	0	Double	zinc	ribbon
zf-RING_4	PF14570.1	gi|449066819|ref|YP_007433901.1|	-	7.2	6.2	12.1	1.7	8.2	3.7	2.6	3	0	0	3	3	3	0	RING/Ubox	like	zinc-binding	domain
PHD	PF00628.24	gi|449066819|ref|YP_007433901.1|	-	8.6	6.1	8.4	0.82	9.4	0.7	2.5	1	1	0	2	2	2	0	PHD-finger
PGM_PMM_I	PF02878.11	gi|449066820|ref|YP_007433902.1|	-	2.6e-42	143.6	0.0	5.2e-42	142.5	0.0	1.6	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_II	PF02879.11	gi|449066820|ref|YP_007433902.1|	-	5.6e-21	74.8	0.0	1.2e-20	73.7	0.0	1.5	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_III	PF02880.11	gi|449066820|ref|YP_007433902.1|	-	5.3e-18	65.1	0.0	9.5e-18	64.2	0.0	1.4	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_IV	PF00408.15	gi|449066820|ref|YP_007433902.1|	-	6.3e-11	42.1	0.0	2.1e-10	40.4	0.0	1.9	2	0	0	2	2	2	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
Glycos_transf_1	PF00534.15	gi|449066821|ref|YP_007433903.1|	-	2.5e-27	95.3	0.5	4.1e-27	94.6	0.3	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|449066821|ref|YP_007433903.1|	-	3.8e-19	69.0	0.0	5.6e-19	68.5	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_4_4	PF13579.1	gi|449066821|ref|YP_007433903.1|	-	3.8e-14	53.1	0.0	6.3e-13	49.1	0.0	2.2	1	1	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_1_4	PF13692.1	gi|449066821|ref|YP_007433903.1|	-	2.4e-08	34.1	0.0	4.4e-08	33.3	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|449066821|ref|YP_007433903.1|	-	0.00027	21.1	0.0	0.00054	20.1	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
MTS	PF05175.9	gi|449066822|ref|YP_007433904.1|	-	1e-34	119.3	0.0	1.2e-34	119.1	0.0	1.0	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.1	gi|449066822|ref|YP_007433904.1|	-	3.3e-13	49.4	0.1	4.7e-13	49.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|449066822|ref|YP_007433904.1|	-	9.4e-09	35.8	0.0	1.4e-08	35.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|449066822|ref|YP_007433904.1|	-	9.6e-08	32.0	0.0	1.3e-07	31.6	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
GidB	PF02527.10	gi|449066822|ref|YP_007433904.1|	-	1.8e-07	30.4	0.1	2.2e-07	30.2	0.0	1.3	1	0	0	1	1	1	1	rRNA	small	subunit	methyltransferase	G
PrmA	PF06325.8	gi|449066822|ref|YP_007433904.1|	-	4.3e-07	29.3	0.0	5e-07	29.1	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_15	PF09445.5	gi|449066822|ref|YP_007433904.1|	-	5.5e-06	26.0	0.3	6.3e-06	25.8	0.2	1.3	1	1	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Met_10	PF02475.11	gi|449066822|ref|YP_007433904.1|	-	1.7e-05	24.4	0.1	1.9e-05	24.3	0.1	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
Cons_hypoth95	PF03602.10	gi|449066822|ref|YP_007433904.1|	-	4.8e-05	22.8	0.0	5.5e-05	22.6	0.0	1.1	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
FmrO	PF07091.6	gi|449066822|ref|YP_007433904.1|	-	7.2e-05	21.9	0.0	9.6e-05	21.4	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	methyltransferase	(FmrO)
DUF633	PF04816.7	gi|449066822|ref|YP_007433904.1|	-	0.0002	20.7	0.1	0.00028	20.2	0.0	1.2	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF633)
Methyltransf_4	PF02390.12	gi|449066822|ref|YP_007433904.1|	-	0.0005	19.1	0.1	0.00058	18.9	0.1	1.2	1	0	0	1	1	1	1	Putative	methyltransferase
DUF43	PF01861.11	gi|449066822|ref|YP_007433904.1|	-	0.00051	19.0	0.0	0.00079	18.4	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF43
UPF0020	PF01170.13	gi|449066822|ref|YP_007433904.1|	-	0.00051	19.6	0.0	0.00061	19.4	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_16	PF10294.4	gi|449066822|ref|YP_007433904.1|	-	0.00053	19.4	0.0	0.00083	18.8	0.0	1.2	1	0	0	1	1	1	1	Putative	methyltransferase
Methyltransf_25	PF13649.1	gi|449066822|ref|YP_007433904.1|	-	0.00055	20.2	0.0	0.00078	19.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
rRNA_methylase	PF06962.7	gi|449066822|ref|YP_007433904.1|	-	0.00061	19.5	0.2	0.24	11.1	0.0	2.2	2	0	0	2	2	2	2	Putative	rRNA	methylase
Methyltransf_12	PF08242.7	gi|449066822|ref|YP_007433904.1|	-	0.0012	19.3	0.0	0.0016	18.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|449066822|ref|YP_007433904.1|	-	0.0034	17.1	0.0	0.0053	16.4	0.0	1.3	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_5	PF01795.14	gi|449066822|ref|YP_007433904.1|	-	0.0065	15.7	0.0	0.014	14.6	0.0	1.5	2	0	0	2	2	2	1	MraW	methylase	family
Methyltransf_11	PF08241.7	gi|449066822|ref|YP_007433904.1|	-	0.0095	16.3	0.0	0.019	15.4	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
TehB	PF03848.9	gi|449066822|ref|YP_007433904.1|	-	0.019	14.1	0.1	0.042	13.0	0.0	1.6	2	0	0	2	2	2	0	Tellurite	resistance	protein	TehB
CMAS	PF02353.15	gi|449066822|ref|YP_007433904.1|	-	0.041	12.9	0.0	0.05	12.6	0.0	1.2	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
Arginosuc_synth	PF00764.14	gi|449066822|ref|YP_007433904.1|	-	0.086	11.8	0.0	0.11	11.4	0.0	1.1	1	0	0	1	1	1	0	Arginosuccinate	synthase
PUA	PF01472.15	gi|449066823|ref|YP_007433905.1|	-	6.7e-15	54.5	0.1	1.6e-14	53.3	0.0	1.7	2	0	0	2	2	2	1	PUA	domain
TruB_N	PF01509.13	gi|449066823|ref|YP_007433905.1|	-	1.7e-08	34.7	0.1	8.7e-07	29.2	0.1	2.7	1	1	0	1	1	1	1	TruB	family	pseudouridylate	synthase	(N	terminal	domain)
Methyltrans_Mon	PF14314.1	gi|449066823|ref|YP_007433905.1|	-	0.006	14.4	0.0	0.0091	13.8	0.0	1.3	1	0	0	1	1	1	1	Virus-capping	methyltransferase
Ribosomal_S3Ae	PF01015.13	gi|449066823|ref|YP_007433905.1|	-	0.081	12.2	0.2	0.12	11.6	0.1	1.2	1	0	0	1	1	1	0	Ribosomal	S3Ae	family
DKCLD	PF08068.7	gi|449066824|ref|YP_007433906.1|	-	2.2e-15	56.2	0.0	2.9e-15	55.9	0.0	1.2	1	0	0	1	1	1	1	DKCLD	(NUC011)	domain
TruB_N	PF01509.13	gi|449066824|ref|YP_007433906.1|	-	0.072	13.2	0.1	0.15	12.2	0.0	1.5	2	0	0	2	2	2	0	TruB	family	pseudouridylate	synthase	(N	terminal	domain)
KOW	PF00467.24	gi|449066825|ref|YP_007433907.1|	-	6.1e-05	22.5	1.0	6.1e-05	22.5	0.7	1.9	2	1	0	2	2	2	1	KOW	motif
Ribosomal_L14e	PF01929.12	gi|449066825|ref|YP_007433907.1|	-	0.00093	19.5	0.1	0.0014	18.9	0.1	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L14
XisI	PF08869.6	gi|449066825|ref|YP_007433907.1|	-	0.045	13.8	0.1	0.054	13.6	0.0	1.1	1	0	0	1	1	1	0	XisI	protein
DEAD	PF00270.24	gi|449066826|ref|YP_007433908.1|	-	5.5e-32	110.5	0.1	2.1e-31	108.6	0.0	2.0	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
DEAD_assoc	PF08494.6	gi|449066826|ref|YP_007433908.1|	-	7.3e-30	104.0	0.0	1.5e-29	103.1	0.0	1.5	1	0	0	1	1	1	1	DEAD/H	associated
Helicase_C	PF00271.26	gi|449066826|ref|YP_007433908.1|	-	5.7e-19	67.7	0.3	6.6e-16	57.9	0.0	3.4	3	0	0	3	3	3	2	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|449066826|ref|YP_007433908.1|	-	0.0082	15.9	0.0	0.024	14.4	0.0	1.8	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
SNF2_N	PF00176.18	gi|449066826|ref|YP_007433908.1|	-	0.016	14.0	0.0	0.03	13.1	0.0	1.4	1	0	0	1	1	1	0	SNF2	family	N-terminal	domain
C-C_Bond_Lyase	PF15617.1	gi|449066826|ref|YP_007433908.1|	-	0.021	13.6	0.0	0.17	10.6	0.0	2.4	3	1	1	4	4	4	0	C-C_Bond_Lyase	of	the	TIM-Barrel	fold
DUF3753	PF12575.3	gi|449066826|ref|YP_007433908.1|	-	0.07	12.9	0.5	0.2	11.4	0.4	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3753)
AAA_10	PF12846.2	gi|449066827|ref|YP_007433909.1|	-	2.3e-26	92.9	0.2	3.4e-26	92.4	0.2	1.3	1	0	0	1	1	1	1	AAA-like	domain
DUF87	PF01935.12	gi|449066827|ref|YP_007433909.1|	-	3.2e-07	30.4	1.7	3.4e-06	27.0	1.2	2.3	1	1	0	1	1	1	1	Domain	of	unknown	function	DUF87
AAA_17	PF13207.1	gi|449066827|ref|YP_007433909.1|	-	2.3e-05	25.2	0.2	0.00011	23.0	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|449066827|ref|YP_007433909.1|	-	0.0003	20.9	0.0	0.45	10.6	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_18	PF13238.1	gi|449066827|ref|YP_007433909.1|	-	0.00044	20.5	0.9	0.0021	18.3	0.6	2.2	1	1	0	1	1	1	1	AAA	domain
TrwB_AAD_bind	PF10412.4	gi|449066827|ref|YP_007433909.1|	-	0.0066	15.1	0.0	0.69	8.4	0.0	2.2	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
ABC_tran	PF00005.22	gi|449066827|ref|YP_007433909.1|	-	0.0069	16.6	0.1	0.014	15.7	0.1	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_5	PF07728.9	gi|449066827|ref|YP_007433909.1|	-	0.0097	15.6	0.0	0.017	14.8	0.0	1.4	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_29	PF13555.1	gi|449066827|ref|YP_007433909.1|	-	0.014	14.8	0.5	0.028	13.9	0.3	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
DUF3439	PF11921.3	gi|449066827|ref|YP_007433909.1|	-	0.03	14.0	0.1	0.077	12.7	0.0	1.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3439)
DUF258	PF03193.11	gi|449066827|ref|YP_007433909.1|	-	0.06	12.5	0.1	0.12	11.5	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA	PF00004.24	gi|449066827|ref|YP_007433909.1|	-	0.076	13.2	0.1	0.29	11.3	0.0	1.9	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_24	PF13479.1	gi|449066827|ref|YP_007433909.1|	-	0.087	12.3	0.2	0.19	11.2	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
AAA_16	PF13191.1	gi|449066827|ref|YP_007433909.1|	-	0.089	12.7	0.0	0.16	11.9	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
NACHT	PF05729.7	gi|449066827|ref|YP_007433909.1|	-	0.14	11.8	0.1	3	7.4	0.0	2.2	2	0	0	2	2	2	0	NACHT	domain
Cytochrome-c551	PF10643.4	gi|449066827|ref|YP_007433909.1|	-	0.36	10.0	6.2	0.68	9.1	4.3	1.4	1	0	0	1	1	1	0	Photosystem	P840	reaction-centre	cytochrome	c-551
RNA_pol_Rpo13	PF12136.3	gi|449066828|ref|YP_007433910.1|	-	3.1e-18	65.1	3.9	3.1e-18	65.1	2.7	2.7	3	0	0	3	3	3	1	RNA	polymerase	Rpo13	subunit	HTH	domain
UBN2_3	PF14244.1	gi|449066828|ref|YP_007433910.1|	-	0.063	12.8	0.1	0.086	12.4	0.1	1.3	1	0	0	1	1	1	0	gag-polypeptide	of	LTR	copia-type
PAP1	PF08601.5	gi|449066828|ref|YP_007433910.1|	-	1.1	8.8	7.4	0.084	12.5	1.2	1.8	1	1	1	2	2	2	0	Transcription	factor	PAP1
PCNA_C	PF02747.10	gi|449066829|ref|YP_007433911.1|	-	1.4e-07	31.5	1.5	4.5e-05	23.3	0.0	3.2	1	1	1	3	3	3	2	Proliferating	cell	nuclear	antigen,	C-terminal	domain
PCNA_N	PF00705.13	gi|449066829|ref|YP_007433911.1|	-	3.8e-05	23.2	0.9	0.00011	21.7	0.2	2.0	2	1	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	N-terminal	domain
Rad9	PF04139.8	gi|449066829|ref|YP_007433911.1|	-	0.0027	16.8	1.0	0.0078	15.3	0.3	1.8	1	1	1	2	2	2	1	Rad9
HATPase_c	PF02518.21	gi|449066829|ref|YP_007433911.1|	-	0.062	13.0	1.0	2.5	7.8	0.7	2.3	1	1	0	1	1	1	0	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
Amidohydro_1	PF01979.15	gi|449066830|ref|YP_007433912.1|	-	1.1e-09	38.4	0.0	1.1e-08	35.2	0.0	2.0	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|449066830|ref|YP_007433912.1|	-	3.7e-07	30.4	0.0	1.3e-05	25.3	0.0	2.1	2	0	0	2	2	2	1	Amidohydrolase
Amidohydro_5	PF13594.1	gi|449066830|ref|YP_007433912.1|	-	0.0018	18.0	0.0	0.0042	16.8	0.0	1.6	1	0	0	1	1	1	1	Amidohydrolase
Borrelia_lipo_1	PF05714.6	gi|449066830|ref|YP_007433912.1|	-	0.0055	15.8	0.5	0.0099	14.9	0.3	1.4	1	0	0	1	1	1	1	Borrelia	burgdorferi	virulent	strain	associated	lipoprotein
TEBP_beta	PF07404.6	gi|449066830|ref|YP_007433912.1|	-	0.041	13.0	0.1	0.33	10.0	0.0	1.9	2	0	0	2	2	2	0	Telomere-binding	protein	beta	subunit	(TEBP	beta)
GGDN	PF05165.7	gi|449066831|ref|YP_007433913.1|	-	2e-23	82.7	0.1	8.8e-21	74.0	0.1	2.0	1	1	0	1	1	1	1	GGDN	family
DMRL_synthase	PF00885.14	gi|449066832|ref|YP_007433914.1|	-	2.9e-39	134.0	0.9	3.4e-39	133.8	0.6	1.0	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
ADSL_C	PF10397.4	gi|449066832|ref|YP_007433914.1|	-	0.00013	21.8	0.1	0.00043	20.2	0.0	1.8	2	0	0	2	2	2	1	Adenylosuccinate	lyase	C-terminus
Metallophos_3	PF14582.1	gi|449066832|ref|YP_007433914.1|	-	0.062	12.4	0.7	1.2	8.1	0.1	2.1	1	1	1	2	2	2	0	Metallophosphoesterase,	calcineurin	superfamily
TOBE	PF03459.12	gi|449066832|ref|YP_007433914.1|	-	0.13	12.4	0.8	7.4	6.7	0.1	2.3	2	0	0	2	2	2	0	TOBE	domain
DMRL_synthase	PF00885.14	gi|449066833|ref|YP_007433915.1|	-	2.6e-15	56.3	0.1	3e-15	56.1	0.0	1.1	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
DHBP_synthase	PF00926.14	gi|449066834|ref|YP_007433916.1|	-	5.1e-51	172.6	0.0	6.3e-51	172.3	0.0	1.0	1	0	0	1	1	1	1	3,4-dihydroxy-2-butanone	4-phosphate	synthase
DUF2208	PF09973.4	gi|449066836|ref|YP_007433918.1|	-	6.8e-79	264.3	22.8	7.7e-79	264.1	15.8	1.0	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2208)
Rer1	PF03248.8	gi|449066836|ref|YP_007433918.1|	-	0.0048	16.4	3.1	0.0048	16.4	2.1	2.3	2	0	0	2	2	2	2	Rer1	family
PDR_CDR	PF06422.7	gi|449066836|ref|YP_007433918.1|	-	0.041	13.5	4.9	0.043	13.4	0.7	2.3	2	0	0	2	2	2	0	CDR	ABC	transporter
BCL_N	PF04714.8	gi|449066836|ref|YP_007433918.1|	-	0.38	10.3	3.1	12	5.5	0.0	3.0	3	0	0	3	3	3	0	BCL7,	N-terminal	conserver	region
GATase_3	PF07685.9	gi|449066837|ref|YP_007433919.1|	-	2.6e-30	105.0	0.0	6e-30	103.9	0.0	1.6	2	0	0	2	2	2	1	CobB/CobQ-like	glutamine	amidotransferase	domain
AAA_26	PF13500.1	gi|449066837|ref|YP_007433919.1|	-	3.4e-14	52.9	0.1	1.5e-08	34.5	0.0	2.4	1	1	1	2	2	2	2	AAA	domain
CbiA	PF01656.18	gi|449066837|ref|YP_007433919.1|	-	4.4e-13	49.0	0.0	8.6e-13	48.1	0.0	1.5	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
PCNA_N	PF00705.13	gi|449066838|ref|YP_007433920.1|	-	3.8e-15	55.5	0.4	9.8e-15	54.1	0.0	1.8	2	0	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	N-terminal	domain
PCNA_C	PF02747.10	gi|449066838|ref|YP_007433920.1|	-	9.4e-11	41.7	1.1	1.7e-09	37.6	0.1	2.2	2	1	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	C-terminal	domain
Rad1	PF02144.11	gi|449066838|ref|YP_007433920.1|	-	2.7e-10	39.4	0.8	4.1e-06	25.7	0.0	2.1	1	1	0	2	2	2	2	Repair	protein	Rad1/Rec1/Rad17
Rad9	PF04139.8	gi|449066838|ref|YP_007433920.1|	-	4.1e-08	32.6	0.2	6.3e-08	32.0	0.1	1.2	1	0	0	1	1	1	1	Rad9
Meth_synt_1	PF08267.7	gi|449066839|ref|YP_007433921.1|	-	2.4e-46	158.4	5.7	2.5e-40	138.6	2.2	2.0	1	1	1	2	2	2	2	Cobalamin-independent	synthase,	N-terminal	domain
Meth_synt_2	PF01717.13	gi|449066839|ref|YP_007433921.1|	-	2.2e-13	49.8	0.0	6.3e-13	48.4	0.0	1.6	1	1	0	1	1	1	1	Cobalamin-independent	synthase,	Catalytic	domain
DUF2150	PF09920.4	gi|449066839|ref|YP_007433921.1|	-	0.016	14.7	0.6	0.059	12.9	0.0	2.0	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2150)
Lipase_GDSL_2	PF13472.1	gi|449066839|ref|YP_007433921.1|	-	0.11	12.5	0.0	0.63	10.1	0.0	1.9	2	0	0	2	2	2	0	GDSL-like	Lipase/Acylhydrolase	family
DUF2779	PF11074.3	gi|449066839|ref|YP_007433921.1|	-	0.49	10.4	4.8	12	5.9	0.1	3.2	1	1	2	3	3	3	0	Domain	of	unknown	function(DUF2779)
Meth_synt_2	PF01717.13	gi|449066840|ref|YP_007433922.1|	-	5.2e-88	295.1	0.0	6.4e-88	294.8	0.0	1.0	1	0	0	1	1	1	1	Cobalamin-independent	synthase,	Catalytic	domain
Meth_synt_1	PF08267.7	gi|449066840|ref|YP_007433922.1|	-	1e-27	97.2	2.4	9.2e-22	77.6	1.7	2.1	2	0	0	2	2	2	2	Cobalamin-independent	synthase,	N-terminal	domain
Ribosomal_S13_N	PF08069.7	gi|449066841|ref|YP_007433923.1|	-	4.1e-24	84.1	0.2	1.1e-23	82.8	0.1	1.7	2	0	0	2	2	2	1	Ribosomal	S13/S15	N-terminal	domain
Ribosomal_S15	PF00312.17	gi|449066841|ref|YP_007433923.1|	-	1.2e-19	69.7	0.1	1.6e-19	69.4	0.1	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S15
DUF2408	PF10303.4	gi|449066841|ref|YP_007433923.1|	-	0.013	15.5	0.0	0.02	15.0	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2408)
LexA_DNA_bind	PF01726.11	gi|449066841|ref|YP_007433923.1|	-	0.13	11.8	0.0	0.39	10.3	0.0	1.8	1	0	0	1	1	1	0	LexA	DNA	binding	domain
CbiX	PF01903.12	gi|449066842|ref|YP_007433924.1|	-	2.6e-27	94.9	0.0	3e-27	94.7	0.0	1.0	1	0	0	1	1	1	1	CbiX
CbiK	PF06180.6	gi|449066842|ref|YP_007433924.1|	-	3.1e-05	23.1	0.0	3.5e-05	23.0	0.0	1.2	1	0	0	1	1	1	1	Cobalt	chelatase	(CbiK)
Ferrochelatase	PF00762.14	gi|449066842|ref|YP_007433924.1|	-	0.032	13.1	0.0	0.034	13.1	0.0	1.2	1	0	0	1	1	1	0	Ferrochelatase
CAT_RBD	PF03123.10	gi|449066842|ref|YP_007433924.1|	-	0.093	12.4	0.1	0.18	11.4	0.1	1.5	1	0	0	1	1	1	0	CAT	RNA	binding	domain
Ribosomal_S6e	PF01092.14	gi|449066843|ref|YP_007433925.1|	-	7e-20	70.9	2.5	2.2e-19	69.3	0.2	2.6	2	1	1	3	3	3	1	Ribosomal	protein	S6e
ATP-gua_Ptrans	PF00217.14	gi|449066843|ref|YP_007433925.1|	-	0.015	14.5	0.3	0.026	13.8	0.2	1.3	1	0	0	1	1	1	0	ATP:guanido	phosphotransferase,	C-terminal	catalytic	domain
GTP_EFTU	PF00009.22	gi|449066844|ref|YP_007433926.1|	-	4e-41	140.5	0.0	6.8e-41	139.7	0.0	1.4	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
eIF2_C	PF09173.6	gi|449066844|ref|YP_007433926.1|	-	1.5e-28	98.6	1.8	3.6e-28	97.4	1.2	1.6	1	0	0	1	1	1	1	Initiation	factor	eIF2	gamma,	C	terminal
GTP_EFTU_D2	PF03144.20	gi|449066844|ref|YP_007433926.1|	-	3e-08	33.6	0.2	3.2e-07	30.3	0.1	2.5	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.18	gi|449066844|ref|YP_007433926.1|	-	0.00025	21.0	0.0	0.0005	20.0	0.0	1.6	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
PduV-EutP	PF10662.4	gi|449066844|ref|YP_007433926.1|	-	0.0051	16.3	0.2	0.3	10.5	0.0	2.4	2	0	0	2	2	2	1	Ethanolamine	utilisation	-	propanediol	utilisation
MobB	PF03205.9	gi|449066844|ref|YP_007433926.1|	-	0.038	13.6	0.2	0.28	10.8	0.0	2.2	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Dynamin_N	PF00350.18	gi|449066844|ref|YP_007433926.1|	-	0.057	13.2	0.1	0.21	11.4	0.0	1.9	1	1	1	2	2	2	0	Dynamin	family
PIN	PF01850.16	gi|449066845|ref|YP_007433927.1|	-	1.6e-06	28.4	0.4	3.1e-06	27.5	0.3	1.5	1	1	0	1	1	1	1	PIN	domain
PIN_4	PF13638.1	gi|449066845|ref|YP_007433927.1|	-	2.4e-05	24.4	0.5	0.0013	18.8	0.3	2.0	1	1	0	1	1	1	1	PIN	domain
Fcf1	PF04900.7	gi|449066845|ref|YP_007433927.1|	-	6.2e-05	23.0	0.1	9.6e-05	22.4	0.0	1.3	1	0	0	1	1	1	1	Fcf1
S1	PF00575.18	gi|449066846|ref|YP_007433928.1|	-	1e-16	60.7	0.3	2.4e-16	59.5	0.2	1.6	1	0	0	1	1	1	1	S1	RNA	binding	domain
SHS2_Rpb7-N	PF03876.12	gi|449066846|ref|YP_007433928.1|	-	1.6e-16	60.1	0.1	3e-16	59.2	0.0	1.5	1	0	0	1	1	1	1	SHS2	domain	found	in	N	terminus	of	Rpb7p/Rpc25p/MJ0397
RNA_pol_Rbc25	PF08292.7	gi|449066846|ref|YP_007433928.1|	-	0.021	15.0	0.0	0.045	13.9	0.0	1.6	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	Rpc25
Spt4	PF06093.8	gi|449066847|ref|YP_007433929.1|	-	4.3e-13	48.9	0.1	5.2e-13	48.6	0.1	1.1	1	0	0	1	1	1	1	Spt4/RpoE2	zinc	finger
DZR	PF12773.2	gi|449066847|ref|YP_007433929.1|	-	0.0019	17.9	1.0	0.0024	17.6	0.7	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
UPF0547	PF10571.4	gi|449066847|ref|YP_007433929.1|	-	0.011	15.3	5.9	0.021	14.4	4.1	1.4	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
zf-C4H2	PF10146.4	gi|449066847|ref|YP_007433929.1|	-	0.018	15.0	0.9	0.021	14.8	0.6	1.1	1	0	0	1	1	1	0	Zinc	finger-containing	protein
YwqJ-deaminase	PF14431.1	gi|449066847|ref|YP_007433929.1|	-	0.036	13.9	0.2	0.056	13.2	0.1	1.3	1	0	0	1	1	1	0	YwqJ-like	deaminase
DUF35_N	PF12172.3	gi|449066847|ref|YP_007433929.1|	-	0.068	13.0	1.2	0.1	12.5	0.8	1.2	1	0	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-ribbon_3	PF13248.1	gi|449066847|ref|YP_007433929.1|	-	0.096	11.9	2.0	0.14	11.4	1.4	1.3	1	0	0	1	1	1	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|449066847|ref|YP_007433929.1|	-	0.15	11.6	1.8	0.25	10.8	1.2	1.3	1	0	0	1	1	1	0	zinc-ribbon	domain
zf-Sec23_Sec24	PF04810.10	gi|449066847|ref|YP_007433929.1|	-	2	8.0	5.0	52	3.5	3.4	2.2	1	1	0	1	1	1	0	Sec23/Sec24	zinc	finger
DUF359	PF04019.7	gi|449066848|ref|YP_007433930.1|	-	1.4e-39	134.2	0.3	1.7e-39	133.9	0.2	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF359)
Holin_BlyA	PF05102.7	gi|449066848|ref|YP_007433930.1|	-	0.7	9.6	4.0	0.7	9.6	0.3	2.4	2	1	0	2	2	2	0	holin,	BlyA	family
PhosphMutase	PF10143.4	gi|449066849|ref|YP_007433931.1|	-	5.9e-61	205.0	0.0	9.4e-61	204.4	0.0	1.3	1	0	0	1	1	1	1	2,3-bisphosphoglycerate-independent	phosphoglycerate	mutase
Metalloenzyme	PF01676.13	gi|449066849|ref|YP_007433931.1|	-	9.2e-46	156.2	0.1	1.1e-45	156.0	0.1	1.1	1	0	0	1	1	1	1	Metalloenzyme	superfamily
Phosphodiest	PF01663.17	gi|449066849|ref|YP_007433931.1|	-	0.012	14.9	0.1	0.022	14.0	0.1	1.4	1	0	0	1	1	1	0	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
AAA	PF00004.24	gi|449066850|ref|YP_007433932.1|	-	1.3e-100	332.8	0.0	1.3e-50	171.0	0.0	2.6	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
CDC48_N	PF02359.13	gi|449066850|ref|YP_007433932.1|	-	1.6e-23	82.4	1.7	4.4e-23	81.0	1.2	1.8	1	0	0	1	1	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
AAA_2	PF07724.9	gi|449066850|ref|YP_007433932.1|	-	2.2e-16	60.2	0.0	1.5e-08	34.7	0.0	3.0	3	0	0	3	3	3	2	AAA	domain	(Cdc48	subfamily)
CDC48_2	PF02933.12	gi|449066850|ref|YP_007433932.1|	-	2.8e-16	58.9	0.4	1.9e-15	56.2	0.1	2.4	2	0	0	2	2	2	1	Cell	division	protein	48	(CDC48),	domain	2
RuvB_N	PF05496.7	gi|449066850|ref|YP_007433932.1|	-	1.7e-15	56.7	0.0	1.8e-07	30.4	0.0	2.6	2	1	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_16	PF13191.1	gi|449066850|ref|YP_007433932.1|	-	1.4e-14	54.4	0.0	2.3e-07	30.9	0.0	3.4	2	1	1	3	3	3	2	AAA	ATPase	domain
AAA_22	PF13401.1	gi|449066850|ref|YP_007433932.1|	-	3.9e-13	49.6	0.3	2.2e-05	24.6	0.0	4.0	2	2	0	2	2	2	2	AAA	domain
AAA_17	PF13207.1	gi|449066850|ref|YP_007433932.1|	-	2.7e-12	47.5	0.1	6e-06	27.0	0.0	3.0	2	1	0	2	2	2	2	AAA	domain
AAA_5	PF07728.9	gi|449066850|ref|YP_007433932.1|	-	3.5e-12	46.2	0.5	4.2e-05	23.2	0.0	3.9	2	2	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
AAA_33	PF13671.1	gi|449066850|ref|YP_007433932.1|	-	3.6e-12	46.3	0.0	4.8e-05	23.2	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
AAA_14	PF13173.1	gi|449066850|ref|YP_007433932.1|	-	4.4e-12	46.0	0.0	2.5e-05	24.2	0.0	3.3	3	0	0	3	3	3	2	AAA	domain
TIP49	PF06068.8	gi|449066850|ref|YP_007433932.1|	-	5.5e-12	45.0	0.0	5e-05	22.1	0.0	2.7	2	0	0	2	2	2	2	TIP49	C-terminus
Zeta_toxin	PF06414.7	gi|449066850|ref|YP_007433932.1|	-	4.1e-10	39.0	0.0	0.00024	20.2	0.0	2.6	2	0	0	2	2	2	2	Zeta	toxin
IstB_IS21	PF01695.12	gi|449066850|ref|YP_007433932.1|	-	1.4e-09	37.5	0.1	0.0014	18.1	0.0	2.4	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
Vps4_C	PF09336.5	gi|449066850|ref|YP_007433932.1|	-	7e-09	35.4	3.3	7.9e-06	25.6	0.1	3.7	4	0	0	4	4	3	2	Vps4	C	terminal	oligomerisation	domain
AAA_18	PF13238.1	gi|449066850|ref|YP_007433932.1|	-	7.4e-09	35.9	0.1	0.00085	19.6	0.0	2.9	2	0	0	2	2	2	2	AAA	domain
AAA_28	PF13521.1	gi|449066850|ref|YP_007433932.1|	-	9.4e-09	35.4	0.0	0.0029	17.5	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_25	PF13481.1	gi|449066850|ref|YP_007433932.1|	-	5.3e-08	32.4	5.6	0.021	14.2	0.2	4.0	2	2	1	3	3	3	3	AAA	domain
Mg_chelatase	PF01078.16	gi|449066850|ref|YP_007433932.1|	-	9.1e-08	31.5	1.1	0.0069	15.5	0.1	2.5	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
RNA_helicase	PF00910.17	gi|449066850|ref|YP_007433932.1|	-	4e-07	30.1	0.0	0.011	15.9	0.0	2.8	2	0	0	2	2	2	2	RNA	helicase
NACHT	PF05729.7	gi|449066850|ref|YP_007433932.1|	-	1.2e-06	28.3	0.7	0.28	10.8	0.0	4.1	4	0	0	4	4	4	2	NACHT	domain
AAA_19	PF13245.1	gi|449066850|ref|YP_007433932.1|	-	1.3e-06	28.0	3.5	0.021	14.5	0.1	2.9	2	0	0	2	2	2	2	Part	of	AAA	domain
Arch_ATPase	PF01637.13	gi|449066850|ref|YP_007433932.1|	-	2.3e-06	27.4	0.1	0.026	14.2	0.0	3.9	3	1	1	4	4	3	1	Archaeal	ATPase
AAA_24	PF13479.1	gi|449066850|ref|YP_007433932.1|	-	5.1e-06	26.2	0.1	0.062	12.8	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
Sigma54_activ_2	PF14532.1	gi|449066850|ref|YP_007433932.1|	-	5.9e-06	26.3	0.0	0.11	12.5	0.0	2.5	2	0	0	2	2	2	2	Sigma-54	interaction	domain
Sigma54_activat	PF00158.21	gi|449066850|ref|YP_007433932.1|	-	7.7e-06	25.4	0.1	0.27	10.6	0.0	3.8	2	2	0	2	2	2	2	Sigma-54	interaction	domain
Bac_DnaA	PF00308.13	gi|449066850|ref|YP_007433932.1|	-	1.2e-05	25.0	0.0	0.015	14.9	0.0	3.5	3	1	0	3	3	3	1	Bacterial	dnaA	protein
AAA_3	PF07726.6	gi|449066850|ref|YP_007433932.1|	-	1.7e-05	24.4	0.0	0.15	11.6	0.0	2.8	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
Parvo_NS1	PF01057.12	gi|449066850|ref|YP_007433932.1|	-	2.3e-05	23.4	0.2	0.057	12.2	0.0	2.4	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
SKI	PF01202.17	gi|449066850|ref|YP_007433932.1|	-	2.7e-05	24.0	0.0	0.032	14.0	0.0	2.6	2	0	0	2	2	2	1	Shikimate	kinase
AFG1_ATPase	PF03969.11	gi|449066850|ref|YP_007433932.1|	-	4.6e-05	22.3	0.0	0.34	9.6	0.0	3.3	3	0	0	3	3	3	1	AFG1-like	ATPase
DUF815	PF05673.8	gi|449066850|ref|YP_007433932.1|	-	5.7e-05	22.1	0.0	0.11	11.4	0.0	2.5	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
PhoH	PF02562.11	gi|449066850|ref|YP_007433932.1|	-	6.3e-05	22.3	0.5	0.28	10.3	0.1	2.6	2	0	0	2	2	2	2	PhoH-like	protein
ABC_tran	PF00005.22	gi|449066850|ref|YP_007433932.1|	-	0.00011	22.4	0.0	0.89	9.8	0.0	3.0	3	0	0	3	3	2	2	ABC	transporter
UPF0079	PF02367.12	gi|449066850|ref|YP_007433932.1|	-	0.00012	21.7	0.2	0.35	10.5	0.0	2.8	2	1	0	2	2	2	2	Uncharacterised	P-loop	hydrolase	UPF0079
DUF2075	PF09848.4	gi|449066850|ref|YP_007433932.1|	-	0.00012	21.1	0.0	0.023	13.7	0.0	2.4	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
KaiC	PF06745.8	gi|449066850|ref|YP_007433932.1|	-	0.00035	19.7	6.7	0.4	9.7	0.0	4.6	3	2	1	5	5	5	2	KaiC
AAA_11	PF13086.1	gi|449066850|ref|YP_007433932.1|	-	0.00054	19.5	0.6	1.4	8.4	0.0	3.0	2	1	0	2	2	2	2	AAA	domain
ResIII	PF04851.10	gi|449066850|ref|YP_007433932.1|	-	0.0012	18.7	0.0	1.9	8.2	0.0	2.5	2	0	0	2	2	2	2	Type	III	restriction	enzyme,	res	subunit
ATP-synt_ab	PF00006.20	gi|449066850|ref|YP_007433932.1|	-	0.0012	18.4	0.0	0.51	9.8	0.0	2.6	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
T2SE	PF00437.15	gi|449066850|ref|YP_007433932.1|	-	0.0014	17.6	0.0	0.66	8.8	0.0	2.5	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
IPT	PF01745.11	gi|449066850|ref|YP_007433932.1|	-	0.0026	16.9	0.3	1.2	8.2	0.1	2.5	2	0	0	2	2	2	1	Isopentenyl	transferase
Viral_helicase1	PF01443.13	gi|449066850|ref|YP_007433932.1|	-	0.0036	16.8	0.0	0.71	9.3	0.0	2.4	2	0	0	2	2	2	1	Viral	(Superfamily	1)	RNA	helicase
AAA_10	PF12846.2	gi|449066850|ref|YP_007433932.1|	-	0.0044	16.4	0.9	2.4	7.5	0.1	3.3	2	2	0	2	2	2	1	AAA-like	domain
NB-ARC	PF00931.17	gi|449066850|ref|YP_007433932.1|	-	0.007	15.2	0.0	3.6	6.3	0.0	2.7	2	0	0	2	2	2	0	NB-ARC	domain
NTPase_1	PF03266.10	gi|449066850|ref|YP_007433932.1|	-	0.01	15.5	6.9	8.7	6.0	0.0	4.9	3	2	2	5	5	5	0	NTPase
AAA_30	PF13604.1	gi|449066850|ref|YP_007433932.1|	-	0.016	14.8	0.2	6.7	6.2	0.1	2.6	2	0	0	2	2	2	0	AAA	domain
Guanylate_kin	PF00625.16	gi|449066850|ref|YP_007433932.1|	-	0.022	14.2	4.0	12	5.2	0.0	4.6	4	1	1	5	5	5	0	Guanylate	kinase
KTI12	PF08433.5	gi|449066850|ref|YP_007433932.1|	-	0.023	13.9	0.0	6.3	5.9	0.0	2.7	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
PduV-EutP	PF10662.4	gi|449066850|ref|YP_007433932.1|	-	0.025	14.0	0.0	8.6	5.8	0.0	2.6	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_29	PF13555.1	gi|449066850|ref|YP_007433932.1|	-	0.045	13.2	0.0	12	5.5	0.0	2.7	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|449066850|ref|YP_007433932.1|	-	0.12	12.7	3.1	13	5.9	0.0	3.5	4	0	0	4	4	2	0	AAA	domain
AAA_21	PF13304.1	gi|449066850|ref|YP_007433932.1|	-	0.88	9.4	3.6	10	6.0	0.9	3.3	2	2	0	2	2	2	0	AAA	domain
Topoisom_bac	PF01131.15	gi|449066851|ref|YP_007433933.1|	-	4.6e-86	289.1	0.1	1.2e-85	287.8	0.1	1.7	1	1	0	1	1	1	1	DNA	topoisomerase
Toprim	PF01751.17	gi|449066851|ref|YP_007433933.1|	-	1.6e-24	85.7	0.6	1.3e-23	82.8	0.0	2.7	2	1	0	2	2	2	1	Toprim	domain
DEAD	PF00270.24	gi|449066851|ref|YP_007433933.1|	-	1.6e-14	53.7	0.1	1.5e-13	50.5	0.0	2.7	3	1	0	3	3	3	1	DEAD/DEAH	box	helicase
ResIII	PF04851.10	gi|449066851|ref|YP_007433933.1|	-	0.00016	21.5	0.0	0.00089	19.1	0.0	2.2	1	1	1	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Sgf11	PF08209.6	gi|449066851|ref|YP_007433933.1|	-	0.0054	16.0	0.1	0.013	14.7	0.1	1.7	1	0	0	1	1	1	1	Sgf11	(transcriptional	regulation	protein)
Helicase_C	PF00271.26	gi|449066851|ref|YP_007433933.1|	-	0.017	14.9	0.1	12	5.7	0.0	4.2	5	0	0	5	5	5	0	Helicase	conserved	C-terminal	domain
AAA_25	PF13481.1	gi|449066851|ref|YP_007433933.1|	-	0.15	11.4	0.0	0.31	10.4	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_19	PF13245.1	gi|449066851|ref|YP_007433933.1|	-	0.24	11.2	0.0	0.64	9.8	0.0	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
CN_hydrolase	PF00795.17	gi|449066852|ref|YP_007433934.1|	-	2.7e-10	39.9	0.0	4.5e-10	39.1	0.0	1.3	1	0	0	1	1	1	1	Carbon-nitrogen	hydrolase
TMP-TENI	PF02581.12	gi|449066852|ref|YP_007433934.1|	-	0.061	12.4	0.2	0.18	10.9	0.0	1.7	2	0	0	2	2	2	0	Thiamine	monophosphate	synthase/TENI
AP_endonuc_2	PF01261.19	gi|449066852|ref|YP_007433934.1|	-	0.095	11.9	0.0	0.15	11.3	0.0	1.2	1	0	0	1	1	1	0	Xylose	isomerase-like	TIM	barrel
Ribosomal_S25	PF03297.10	gi|449066853|ref|YP_007433935.1|	-	9.9e-12	44.8	9.8	1.2e-11	44.5	6.8	1.0	1	0	0	1	1	1	1	S25	ribosomal	protein
HTH_Crp_2	PF13545.1	gi|449066853|ref|YP_007433935.1|	-	0.00038	20.1	1.2	0.34	10.7	0.1	2.1	1	1	1	2	2	2	2	Crp-like	helix-turn-helix	domain
EAP30	PF04157.11	gi|449066853|ref|YP_007433935.1|	-	0.0006	19.0	1.6	0.0011	18.1	1.1	1.4	1	1	0	1	1	1	1	EAP30/Vps36	family
MarR	PF01047.17	gi|449066853|ref|YP_007433935.1|	-	0.0011	18.6	1.8	0.004	16.8	0.2	2.4	2	1	1	3	3	3	1	MarR	family
TrmB	PF01978.14	gi|449066853|ref|YP_007433935.1|	-	0.0038	16.9	3.8	0.0071	16.0	0.4	2.3	2	1	1	3	3	3	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|449066853|ref|YP_007433935.1|	-	0.0039	16.5	1.3	1	8.8	0.2	2.5	2	1	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
IF2_N	PF04760.10	gi|449066853|ref|YP_007433935.1|	-	0.0045	16.6	2.8	0.48	10.1	0.2	2.4	1	1	1	2	2	2	2	Translation	initiation	factor	IF-2,	N-terminal	region
Rrf2	PF02082.15	gi|449066853|ref|YP_007433935.1|	-	0.0074	16.3	1.6	1.1	9.4	0.1	2.2	1	1	1	2	2	2	1	Transcriptional	regulator
HTH_11	PF08279.7	gi|449066853|ref|YP_007433935.1|	-	0.014	15.0	0.8	0.014	15.0	0.5	1.9	3	0	0	3	3	3	0	HTH	domain
Fe_dep_repress	PF01325.14	gi|449066853|ref|YP_007433935.1|	-	0.021	14.7	0.6	0.021	14.7	0.4	2.4	2	1	1	3	3	3	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Dynamitin	PF04912.9	gi|449066853|ref|YP_007433935.1|	-	0.035	12.9	5.8	0.04	12.7	4.0	1.1	1	0	0	1	1	1	0	Dynamitin
MarR_2	PF12802.2	gi|449066853|ref|YP_007433935.1|	-	0.038	13.6	0.1	0.21	11.2	0.0	2.1	2	1	1	3	3	3	0	MarR	family
UPF0228	PF05727.6	gi|449066853|ref|YP_007433935.1|	-	0.047	13.4	1.6	0.058	13.1	0.8	1.5	1	1	0	1	1	1	0	Uncharacterised	protein	family	(UPF0228)
YWFCY	PF14293.1	gi|449066853|ref|YP_007433935.1|	-	0.048	13.5	0.0	0.075	12.8	0.0	1.3	1	0	0	1	1	1	0	YWFCY	protein
DUF1104	PF06518.6	gi|449066853|ref|YP_007433935.1|	-	0.051	13.7	7.5	0.092	12.8	5.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1104)
HTH_36	PF13730.1	gi|449066853|ref|YP_007433935.1|	-	0.16	12.1	0.7	15	5.8	0.2	2.4	2	0	0	2	2	2	0	Helix-turn-helix	domain
FeoC	PF09012.5	gi|449066853|ref|YP_007433935.1|	-	0.43	10.3	2.2	0.42	10.3	0.1	1.8	2	0	0	2	2	2	0	FeoC	like	transcriptional	regulator
DUF2250	PF10007.4	gi|449066853|ref|YP_007433935.1|	-	0.69	9.8	5.3	0.21	11.5	0.5	2.1	1	1	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF3573	PF12097.3	gi|449066853|ref|YP_007433935.1|	-	0.71	8.4	3.5	0.84	8.1	2.4	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3573)
Ribosomal_S19e	PF01090.14	gi|449066853|ref|YP_007433935.1|	-	3.5	7.0	6.8	1.8	7.9	0.1	2.4	1	1	1	2	2	2	0	Ribosomal	protein	S19e
Tombus_movement	PF05318.7	gi|449066853|ref|YP_007433935.1|	-	5.4	7.7	7.0	35	5.1	4.8	2.1	1	1	0	1	1	1	0	Tombusvirus	movement	protein
TrmB	PF01978.14	gi|449066854|ref|YP_007433936.1|	-	7.9e-20	70.3	0.2	2.9e-19	68.5	0.0	2.0	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|449066854|ref|YP_007433936.1|	-	2.9e-07	29.7	0.5	7.3e-07	28.4	0.0	1.9	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_27	PF13463.1	gi|449066854|ref|YP_007433936.1|	-	1.3e-05	25.3	0.0	0.0036	17.5	0.0	2.3	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
MarR	PF01047.17	gi|449066854|ref|YP_007433936.1|	-	0.00039	20.0	0.2	0.0011	18.6	0.0	1.8	2	0	0	2	2	2	1	MarR	family
MarR_2	PF12802.2	gi|449066854|ref|YP_007433936.1|	-	0.0023	17.5	0.0	0.004	16.8	0.0	1.4	1	0	0	1	1	1	1	MarR	family
Penicillinase_R	PF03965.11	gi|449066854|ref|YP_007433936.1|	-	0.0038	17.3	0.1	0.0081	16.2	0.1	1.6	1	0	0	1	1	1	1	Penicillinase	repressor
PadR	PF03551.9	gi|449066854|ref|YP_007433936.1|	-	0.0073	16.0	0.0	0.018	14.8	0.0	1.6	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_34	PF13601.1	gi|449066854|ref|YP_007433936.1|	-	0.0073	16.3	0.0	0.017	15.1	0.0	1.6	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
TFIIE_alpha	PF02002.12	gi|449066854|ref|YP_007433936.1|	-	0.012	15.1	0.2	0.045	13.2	0.1	1.9	1	1	0	1	1	1	0	TFIIE	alpha	subunit
HTH_28	PF13518.1	gi|449066854|ref|YP_007433936.1|	-	0.02	14.9	0.0	0.063	13.2	0.0	1.9	2	0	0	2	2	2	0	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|449066854|ref|YP_007433936.1|	-	0.031	14.3	0.0	0.093	12.8	0.0	1.8	2	0	0	2	2	1	0	Transcriptional	regulator
HTH_29	PF13551.1	gi|449066854|ref|YP_007433936.1|	-	0.04	14.0	0.0	0.065	13.3	0.0	1.3	1	0	0	1	1	1	0	Winged	helix-turn	helix
DUF387	PF04079.11	gi|449066854|ref|YP_007433936.1|	-	0.044	13.1	0.0	0.13	11.6	0.0	1.7	2	0	0	2	2	2	0	Putative	transcriptional	regulators	(Ypuh-like)
DUF2250	PF10007.4	gi|449066854|ref|YP_007433936.1|	-	0.048	13.5	0.1	0.57	10.1	0.0	2.2	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_45	PF14947.1	gi|449066854|ref|YP_007433936.1|	-	0.086	12.6	0.7	3.1	7.6	0.1	2.5	2	0	0	2	2	2	0	Winged	helix-turn-helix
HTH_IclR	PF09339.5	gi|449066854|ref|YP_007433936.1|	-	0.097	12.2	0.0	0.16	11.5	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_Crp_2	PF13545.1	gi|449066854|ref|YP_007433936.1|	-	0.11	12.3	0.0	0.25	11.1	0.0	1.5	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
RHH_1	PF01402.16	gi|449066855|ref|YP_007433937.1|	-	2.5e-08	33.4	0.0	2.9e-08	33.2	0.0	1.1	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
RHH_2	PF03693.9	gi|449066855|ref|YP_007433937.1|	-	1.5e-06	28.3	0.0	1.6e-06	28.2	0.0	1.1	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0156)
DUF2191	PF09957.4	gi|449066855|ref|YP_007433937.1|	-	0.0068	16.1	0.0	0.01	15.5	0.0	1.4	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2191)
GCD14	PF08704.5	gi|449066856|ref|YP_007433938.1|	-	9.8e-30	103.8	0.0	1.3e-29	103.4	0.0	1.1	1	0	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
Methyltransf_31	PF13847.1	gi|449066856|ref|YP_007433938.1|	-	7.9e-13	48.2	0.0	1.1e-12	47.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|449066856|ref|YP_007433938.1|	-	6.3e-11	42.8	0.0	1e-10	42.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|449066856|ref|YP_007433938.1|	-	1.3e-08	34.6	0.0	1.7e-08	34.2	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_26	PF13659.1	gi|449066856|ref|YP_007433938.1|	-	3.8e-06	26.9	0.0	9.4e-06	25.6	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|449066856|ref|YP_007433938.1|	-	1.2e-05	24.7	0.0	4.3e-05	22.9	0.0	1.9	1	1	0	1	1	1	1	Methyltransferase	small	domain
UPF0020	PF01170.13	gi|449066856|ref|YP_007433938.1|	-	4.7e-05	23.0	0.0	7.5e-05	22.3	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Ubie_methyltran	PF01209.13	gi|449066856|ref|YP_007433938.1|	-	6e-05	22.2	0.0	0.00012	21.3	0.0	1.4	1	1	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
PrmA	PF06325.8	gi|449066856|ref|YP_007433938.1|	-	0.00012	21.3	0.0	0.00016	20.9	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_24	PF13578.1	gi|449066856|ref|YP_007433938.1|	-	0.00017	22.3	0.0	0.0003	21.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_32	PF13679.1	gi|449066856|ref|YP_007433938.1|	-	0.00024	20.8	0.0	0.00033	20.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_3	PF01596.12	gi|449066856|ref|YP_007433938.1|	-	0.00031	19.8	0.0	0.00047	19.2	0.0	1.2	1	0	0	1	1	1	1	O-methyltransferase
Methyltransf_23	PF13489.1	gi|449066856|ref|YP_007433938.1|	-	0.00043	20.0	0.0	0.0019	17.9	0.0	1.8	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|449066856|ref|YP_007433938.1|	-	0.00058	20.2	0.0	0.0015	18.9	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|449066856|ref|YP_007433938.1|	-	0.0034	16.4	0.0	0.0047	15.9	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_25	PF13649.1	gi|449066856|ref|YP_007433938.1|	-	0.0097	16.2	0.0	0.017	15.4	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
DUF946	PF06101.6	gi|449066856|ref|YP_007433938.1|	-	0.055	11.4	0.0	0.078	10.9	0.0	1.1	1	0	0	1	1	1	0	Plant	protein	of	unknown	function	(DUF946)
ATP-synt_F6	PF05511.6	gi|449066857|ref|YP_007433939.1|	-	0.0084	15.9	2.5	0.018	14.9	0.3	2.1	1	1	0	2	2	2	1	Mitochondrial	ATP	synthase	coupling	factor	6
OmpH	PF03938.9	gi|449066857|ref|YP_007433939.1|	-	0.03	14.2	5.9	0.035	14.0	4.1	1.0	1	0	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
DUF496	PF04363.7	gi|449066857|ref|YP_007433939.1|	-	0.057	13.2	2.1	0.079	12.7	1.4	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF496)
PMC2NT	PF08066.7	gi|449066857|ref|YP_007433939.1|	-	0.078	13.2	0.4	0.22	11.8	0.1	1.8	1	1	1	2	2	2	0	PMC2NT	(NUC016)	domain
Peptidase_U40	PF10464.4	gi|449066857|ref|YP_007433939.1|	-	0.12	11.7	0.0	0.16	11.3	0.0	1.1	1	0	0	1	1	1	0	Peptidase	U40
Mitofilin	PF09731.4	gi|449066857|ref|YP_007433939.1|	-	0.23	10.0	9.6	0.28	9.7	6.6	1.0	1	0	0	1	1	1	0	Mitochondrial	inner	membrane	protein
DUF2115	PF09888.4	gi|449066857|ref|YP_007433939.1|	-	0.32	11.0	2.4	0.4	10.7	1.7	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2115)
Ribosomal_S8	PF00410.14	gi|449066857|ref|YP_007433939.1|	-	0.49	10.2	2.9	0.64	9.8	1.5	1.5	1	1	0	1	1	1	0	Ribosomal	protein	S8
DUF826	PF05696.6	gi|449066857|ref|YP_007433939.1|	-	0.75	9.9	6.2	0.43	10.7	0.7	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF826)
LUC7	PF03194.10	gi|449066857|ref|YP_007433939.1|	-	1.3	8.5	4.6	1.7	8.1	3.2	1.2	1	0	0	1	1	1	0	LUC7	N_terminus
ETC_C1_NDUFA5	PF04716.9	gi|449066857|ref|YP_007433939.1|	-	1.8	8.1	6.5	14	5.3	0.1	2.7	2	1	1	3	3	3	0	ETC	complex	I	subunit	conserved	region
vATP-synt_AC39	PF01992.11	gi|449066858|ref|YP_007433940.1|	-	6e-07	28.9	7.0	1.8e-06	27.3	4.8	1.8	1	1	0	1	1	1	1	ATP	synthase	(C/AC39)	subunit
Ten1_2	PF15490.1	gi|449066858|ref|YP_007433940.1|	-	0.062	12.8	0.1	15	5.1	0.0	2.6	1	1	1	2	2	2	0	Telomere-capping,	CST	complex	subunit
Rep_N	PF08724.5	gi|449066858|ref|YP_007433940.1|	-	0.11	12.0	0.0	0.18	11.3	0.0	1.3	1	0	0	1	1	1	0	Rep	protein	catalytic	domain	like
Aldo_ket_red	PF00248.16	gi|449066860|ref|YP_007433942.1|	-	2.8e-47	160.8	0.0	3.5e-47	160.5	0.0	1.1	1	0	0	1	1	1	1	Aldo/keto	reductase	family
Ham1p_like	PF01725.11	gi|449066861|ref|YP_007433943.1|	-	7.8e-54	181.9	0.0	8.8e-54	181.7	0.0	1.0	1	0	0	1	1	1	1	Ham1	family
RIO1	PF01163.17	gi|449066862|ref|YP_007433944.1|	-	1.2e-11	44.3	0.0	1.8e-11	43.7	0.0	1.3	1	0	0	1	1	1	1	RIO1	family
Pkinase	PF00069.20	gi|449066862|ref|YP_007433944.1|	-	1.3e-10	40.8	0.3	1.8e-10	40.4	0.2	1.2	1	0	0	1	1	1	1	Protein	kinase	domain
APH	PF01636.18	gi|449066862|ref|YP_007433944.1|	-	5.7e-09	36.0	0.0	3e-05	23.8	0.0	2.1	1	1	1	2	2	2	2	Phosphotransferase	enzyme	family
Kdo	PF06293.9	gi|449066862|ref|YP_007433944.1|	-	3e-08	32.9	0.0	4.2e-08	32.4	0.0	1.3	1	0	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
Pkinase_Tyr	PF07714.12	gi|449066862|ref|YP_007433944.1|	-	2.9e-06	26.5	0.2	4.8e-06	25.8	0.1	1.5	1	1	0	1	1	1	1	Protein	tyrosine	kinase
WaaY	PF06176.6	gi|449066862|ref|YP_007433944.1|	-	6.5e-06	25.5	2.0	9.4e-06	25.0	1.4	1.4	1	1	0	1	1	1	1	Lipopolysaccharide	core	biosynthesis	protein	(WaaY)
Choline_kinase	PF01633.15	gi|449066862|ref|YP_007433944.1|	-	0.012	15.2	0.1	0.026	14.0	0.0	1.7	1	1	0	1	1	1	0	Choline/ethanolamine	kinase
EcKinase	PF02958.15	gi|449066862|ref|YP_007433944.1|	-	0.018	14.2	0.1	0.032	13.3	0.0	1.4	1	0	0	1	1	1	0	Ecdysteroid	kinase
Peptidase_M22	PF00814.20	gi|449066863|ref|YP_007433945.1|	-	4.6e-77	259.1	0.2	5.6e-77	258.8	0.1	1.0	1	0	0	1	1	1	1	Glycoprotease	family
Ribosomal_S27	PF01599.14	gi|449066864|ref|YP_007433946.1|	-	9.6e-11	41.3	1.7	1.4e-10	40.8	1.2	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S27a
Zn_Tnp_IS1595	PF12760.2	gi|449066864|ref|YP_007433946.1|	-	0.00024	20.8	2.4	0.00034	20.3	1.7	1.2	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
RNA_POL_M_15KD	PF02150.11	gi|449066864|ref|YP_007433946.1|	-	0.00067	19.2	0.2	0.0013	18.3	0.1	1.5	1	0	0	1	1	1	1	RNA	polymerases	M/15	Kd	subunit
OrfB_Zn_ribbon	PF07282.6	gi|449066864|ref|YP_007433946.1|	-	0.0012	18.4	1.4	0.0014	18.2	1.0	1.3	1	1	0	1	1	1	1	Putative	transposase	DNA-binding	domain
zf-ribbon_3	PF13248.1	gi|449066864|ref|YP_007433946.1|	-	0.0036	16.4	0.9	0.25	10.6	0.0	2.2	2	0	0	2	2	2	1	zinc-ribbon	domain
GFA	PF04828.9	gi|449066864|ref|YP_007433946.1|	-	0.0086	16.0	1.6	0.67	9.9	0.1	2.1	1	1	1	2	2	2	1	Glutathione-dependent	formaldehyde-activating	enzyme
IBR	PF01485.16	gi|449066864|ref|YP_007433946.1|	-	0.012	15.4	1.0	0.014	15.2	0.7	1.1	1	0	0	1	1	1	0	IBR	domain
zf-tcix	PF14952.1	gi|449066864|ref|YP_007433946.1|	-	0.013	14.7	2.6	0.061	12.6	0.0	2.3	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
DZR	PF12773.2	gi|449066864|ref|YP_007433946.1|	-	0.024	14.4	1.4	0.041	13.7	1.0	1.5	1	1	0	1	1	1	0	Double	zinc	ribbon
DUF2082	PF09855.4	gi|449066864|ref|YP_007433946.1|	-	0.031	14.1	2.9	0.27	11.0	0.2	2.3	1	1	1	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
zinc_ribbon_2	PF13240.1	gi|449066864|ref|YP_007433946.1|	-	0.031	13.7	2.0	1.1	8.8	0.1	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
FAM72	PF14976.1	gi|449066864|ref|YP_007433946.1|	-	0.033	14.0	0.6	0.054	13.3	0.4	1.4	1	1	0	1	1	1	0	FAM72	protein
Zn-ribbon_8	PF09723.5	gi|449066864|ref|YP_007433946.1|	-	0.042	13.7	0.6	0.8	9.7	0.0	2.2	2	0	0	2	2	2	0	Zinc	ribbon	domain
Nudix_N_2	PF14803.1	gi|449066864|ref|YP_007433946.1|	-	0.055	13.1	1.8	0.16	11.7	1.2	1.7	1	1	0	1	1	1	0	Nudix	N-terminal
Zn_Tnp_IS91	PF14319.1	gi|449066864|ref|YP_007433946.1|	-	0.074	12.5	0.6	0.097	12.1	0.4	1.2	1	0	0	1	1	1	0	Transposase	zinc-binding	domain
zf-ISL3	PF14690.1	gi|449066864|ref|YP_007433946.1|	-	0.081	12.9	3.7	1.1	9.3	0.6	2.2	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
DUF2387	PF09526.5	gi|449066864|ref|YP_007433946.1|	-	0.13	12.1	1.5	0.18	11.7	0.5	1.7	1	1	1	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
TFIIS_C	PF01096.13	gi|449066864|ref|YP_007433946.1|	-	0.19	11.4	1.8	4.2	7.0	0.2	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
Rubredoxin	PF00301.15	gi|449066864|ref|YP_007433946.1|	-	0.2	11.5	1.7	7.5	6.5	0.1	2.3	2	0	0	2	2	2	0	Rubredoxin
PhnA_Zn_Ribbon	PF08274.7	gi|449066864|ref|YP_007433946.1|	-	0.21	11.4	0.8	0.52	10.1	0.6	1.6	1	1	0	1	1	1	0	PhnA	Zinc-Ribbon
A2L_zn_ribbon	PF08792.5	gi|449066864|ref|YP_007433946.1|	-	0.25	10.8	1.4	5	6.7	0.1	2.3	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
Ribosomal_L37e	PF01907.14	gi|449066864|ref|YP_007433946.1|	-	0.32	10.8	3.2	0.57	10.0	2.1	1.5	1	1	0	1	1	1	0	Ribosomal	protein	L37e
ADK_lid	PF05191.9	gi|449066864|ref|YP_007433946.1|	-	0.49	10.0	2.2	3	7.5	1.5	2.0	1	1	1	2	2	2	0	Adenylate	kinase,	active	site	lid
zf-C4_Topoisom	PF01396.14	gi|449066864|ref|YP_007433946.1|	-	0.99	8.9	4.0	7	6.2	2.8	2.1	1	1	0	1	1	1	0	Topoisomerase	DNA	binding	C4	zinc	finger
UPF0547	PF10571.4	gi|449066864|ref|YP_007433946.1|	-	1.5	8.6	6.9	0.43	10.3	0.4	2.0	1	1	1	2	2	2	0	Uncharacterised	protein	family	UPF0547
YhfH	PF14149.1	gi|449066864|ref|YP_007433946.1|	-	1.5	8.6	7.8	0.37	10.6	0.9	2.1	1	1	1	2	2	2	0	YhfH-like	protein
zf-NADH-PPase	PF09297.6	gi|449066864|ref|YP_007433946.1|	-	1.5	8.3	5.6	3.2	7.3	0.1	2.2	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
Auto_anti-p27	PF06677.7	gi|449066864|ref|YP_007433946.1|	-	3.2	7.5	6.0	29	4.5	4.6	2.0	1	1	1	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
Zn_ribbon_recom	PF13408.1	gi|449066864|ref|YP_007433946.1|	-	4.4	7.6	6.2	32	4.8	4.0	2.2	1	1	1	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
Ogr_Delta	PF04606.7	gi|449066864|ref|YP_007433946.1|	-	4.4	7.0	6.2	9	6.0	0.6	2.7	3	0	0	3	3	3	0	Ogr/Delta-like	zinc	finger
TF_Zn_Ribbon	PF08271.7	gi|449066864|ref|YP_007433946.1|	-	5.3	6.4	6.0	4	6.8	0.2	2.5	3	0	0	3	3	3	0	TFIIB	zinc-binding
zf-IS66	PF13005.2	gi|449066864|ref|YP_007433946.1|	-	7.4	6.6	6.4	4.3	7.4	0.2	2.3	1	1	1	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
Ribosomal_S24e	PF01282.14	gi|449066865|ref|YP_007433947.1|	-	1.6e-15	56.6	0.1	2.3e-15	56.1	0.1	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S24e
Thi4	PF01946.12	gi|449066866|ref|YP_007433948.1|	-	1.3e-87	292.7	4.3	1.5e-87	292.5	3.0	1.0	1	0	0	1	1	1	1	Thi4	family
DAO	PF01266.19	gi|449066866|ref|YP_007433948.1|	-	3.3e-15	55.8	4.3	2e-09	36.8	0.3	2.1	1	1	1	2	2	2	2	FAD	dependent	oxidoreductase
FAD_oxidored	PF12831.2	gi|449066866|ref|YP_007433948.1|	-	3.3e-10	39.6	3.2	4.1e-10	39.3	2.2	1.1	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|449066866|ref|YP_007433948.1|	-	3.4e-10	39.7	0.7	8.7e-10	38.4	0.4	1.7	2	0	0	2	2	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.19	gi|449066866|ref|YP_007433948.1|	-	4.4e-10	38.9	6.1	1.5e-07	30.6	0.7	2.6	3	0	0	3	3	3	2	FAD	binding	domain
Pyr_redox_2	PF07992.9	gi|449066866|ref|YP_007433948.1|	-	2.5e-08	34.0	1.2	3.7e-08	33.4	0.7	1.4	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|449066866|ref|YP_007433948.1|	-	1.6e-07	31.5	0.4	4.1e-07	30.2	0.3	1.7	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|449066866|ref|YP_007433948.1|	-	6.2e-07	28.7	0.0	9.7e-07	28.1	0.0	1.3	1	0	0	1	1	1	1	FAD	binding	domain
HI0933_like	PF03486.9	gi|449066866|ref|YP_007433948.1|	-	4.2e-06	25.5	0.2	5.6e-06	25.0	0.1	1.3	1	0	0	1	1	1	1	HI0933-like	protein
GIDA	PF01134.17	gi|449066866|ref|YP_007433948.1|	-	1.1e-05	24.5	0.7	2e-05	23.6	0.5	1.4	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
Lycopene_cycl	PF05834.7	gi|449066866|ref|YP_007433948.1|	-	0.00029	19.8	0.3	0.00082	18.3	0.2	1.8	1	1	0	1	1	1	1	Lycopene	cyclase	protein
Pyr_redox	PF00070.22	gi|449066866|ref|YP_007433948.1|	-	0.00055	20.2	0.6	0.0023	18.2	0.4	2.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Amino_oxidase	PF01593.19	gi|449066866|ref|YP_007433948.1|	-	0.0013	17.9	0.0	0.0085	15.2	0.0	2.0	2	0	0	2	2	2	1	Flavin	containing	amine	oxidoreductase
Shikimate_DH	PF01488.15	gi|449066866|ref|YP_007433948.1|	-	0.0038	17.3	0.0	0.011	15.8	0.0	1.7	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
ThiF	PF00899.16	gi|449066866|ref|YP_007433948.1|	-	0.023	14.5	0.2	0.068	12.9	0.0	1.9	2	0	0	2	2	2	0	ThiF	family
NAD_binding_9	PF13454.1	gi|449066866|ref|YP_007433948.1|	-	0.027	14.2	1.2	0.059	13.1	0.1	2.1	2	0	0	2	2	2	0	FAD-NAD(P)-binding
K_oxygenase	PF13434.1	gi|449066866|ref|YP_007433948.1|	-	0.082	11.8	0.0	0.14	11.0	0.0	1.2	1	0	0	1	1	1	0	L-lysine	6-monooxygenase	(NADPH-requiring)
Trp_halogenase	PF04820.9	gi|449066866|ref|YP_007433948.1|	-	0.094	11.3	4.9	0.15	10.6	0.5	2.4	2	1	1	3	3	3	0	Tryptophan	halogenase
GMC_oxred_N	PF00732.14	gi|449066866|ref|YP_007433948.1|	-	0.12	11.4	0.1	0.26	10.3	0.0	1.5	2	0	0	2	2	2	0	GMC	oxidoreductase
Arc_trans_TRASH	PF08394.5	gi|449066867|ref|YP_007433949.1|	-	0.00055	20.0	5.8	0.00087	19.4	4.0	1.3	1	0	0	1	1	1	1	Archaeal	TRASH	domain
zf-FCS	PF06467.9	gi|449066867|ref|YP_007433949.1|	-	0.0062	16.1	9.4	0.011	15.3	6.5	1.6	1	1	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
zf-SNAP50_C	PF12251.3	gi|449066867|ref|YP_007433949.1|	-	0.018	14.4	2.2	0.02	14.2	1.5	1.1	1	0	0	1	1	1	0	snRNA-activating	protein	of	50kDa	MW	C	terminal
zf-RING_2	PF13639.1	gi|449066867|ref|YP_007433949.1|	-	0.067	13.0	2.3	0.095	12.5	1.6	1.3	1	0	0	1	1	1	0	Ring	finger	domain
FANCL_C	PF11793.3	gi|449066867|ref|YP_007433949.1|	-	0.1	12.6	5.0	0.14	12.0	3.5	1.3	1	0	0	1	1	1	0	FANCL	C-terminal	domain
DUF3388	PF11868.3	gi|449066867|ref|YP_007433949.1|	-	0.1	11.6	0.0	0.11	11.6	0.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3388)
PcF	PF09461.5	gi|449066867|ref|YP_007433949.1|	-	0.12	12.3	1.0	0.12	12.3	0.7	1.7	2	0	0	2	2	2	0	Phytotoxin	PcF	protein
zf-MYND	PF01753.13	gi|449066867|ref|YP_007433949.1|	-	0.38	10.6	4.3	0.62	9.9	3.0	1.4	1	1	0	1	1	1	0	MYND	finger
Prok-RING_1	PF14446.1	gi|449066867|ref|YP_007433949.1|	-	0.91	9.2	5.1	1.7	8.4	3.5	1.6	1	1	0	1	1	1	0	Prokaryotic	RING	finger	family	1
DUF329	PF03884.9	gi|449066867|ref|YP_007433949.1|	-	1.8	8.1	9.7	7.2	6.2	6.7	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF329)
DUF3330	PF11809.3	gi|449066867|ref|YP_007433949.1|	-	8.3	6.3	6.6	49	3.8	4.6	2.2	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF3330)
Flavoprotein	PF02441.14	gi|449066868|ref|YP_007433950.1|	-	2.8e-22	78.7	0.0	4.7e-22	78.0	0.0	1.3	1	0	0	1	1	1	1	Flavoprotein
Fer4_18	PF13746.1	gi|449066869|ref|YP_007433951.1|	-	0.47	10.9	4.3	7.5	7.0	3.0	2.2	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
tRNA_int_endo	PF01974.12	gi|449066870|ref|YP_007433952.1|	-	4.6e-26	90.4	0.0	7.5e-26	89.7	0.0	1.3	1	0	0	1	1	1	1	tRNA	intron	endonuclease,	catalytic	C-terminal	domain
tRNA_int_endo_N	PF02778.9	gi|449066870|ref|YP_007433952.1|	-	3.7e-20	71.2	0.1	1.5e-19	69.2	0.1	1.9	2	0	0	2	2	2	1	tRNA	intron	endonuclease,	N-terminal	domain
PhoU_div	PF01865.11	gi|449066871|ref|YP_007433953.1|	-	3.5e-09	36.1	8.2	3.7e-07	29.5	1.7	2.1	1	1	1	2	2	2	2	Protein	of	unknown	function	DUF47
PhoU	PF01895.14	gi|449066871|ref|YP_007433953.1|	-	1.7e-07	31.6	11.2	4.7e-06	26.9	2.4	2.7	2	1	1	3	3	3	2	PhoU	domain
Tropomyosin	PF00261.15	gi|449066871|ref|YP_007433953.1|	-	0.0026	16.9	1.7	0.012	14.7	0.4	2.0	1	1	0	2	2	2	1	Tropomyosin
HrpJ	PF07201.6	gi|449066871|ref|YP_007433953.1|	-	0.0071	16.3	0.2	0.02	14.8	0.1	1.8	1	0	0	1	1	1	1	HrpJ-like	domain
Spore_YpjB	PF09577.5	gi|449066871|ref|YP_007433953.1|	-	0.032	13.7	0.6	0.032	13.7	0.4	1.5	2	0	0	2	2	2	0	Sporulation	protein	YpjB	(SpoYpjB)
DUF1664	PF07889.7	gi|449066871|ref|YP_007433953.1|	-	0.048	13.4	0.8	0.24	11.1	0.0	2.4	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF1664)
DUF2333	PF10095.4	gi|449066871|ref|YP_007433953.1|	-	0.049	12.2	0.2	0.078	11.6	0.1	1.3	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2333)
T4_tail_cap	PF11091.3	gi|449066871|ref|YP_007433953.1|	-	0.067	11.8	2.6	0.14	10.8	0.2	1.9	1	1	0	2	2	2	0	Tail-tube	assembly	protein
DUF2408	PF10303.4	gi|449066871|ref|YP_007433953.1|	-	0.49	10.5	2.9	7	6.7	0.1	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2408)
Sec8_exocyst	PF04048.9	gi|449066871|ref|YP_007433953.1|	-	0.57	9.8	6.0	0.87	9.2	0.6	2.5	1	1	1	2	2	2	0	Sec8	exocyst	complex	component	specific	domain
Laminin_II	PF06009.7	gi|449066871|ref|YP_007433953.1|	-	0.61	9.8	7.4	1.7	8.3	0.2	2.9	2	1	1	3	3	3	0	Laminin	Domain	II
DUF1002	PF06207.6	gi|449066871|ref|YP_007433953.1|	-	1.1	8.4	7.1	0.7	9.1	0.9	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1002)
DUF4559	PF15112.1	gi|449066871|ref|YP_007433953.1|	-	1.6	7.7	5.2	2.2	7.3	0.7	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4559)
MMS19_N	PF14500.1	gi|449066872|ref|YP_007433954.1|	-	0.04	13.1	0.1	0.052	12.8	0.0	1.3	1	0	0	1	1	1	0	Dos2-interacting	transcription	regulator	of	RNA-Pol-II
DUF948	PF06103.6	gi|449066872|ref|YP_007433954.1|	-	0.046	13.5	1.4	0.12	12.1	0.2	1.9	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
Molydop_binding	PF01568.16	gi|449066873|ref|YP_007433955.1|	-	0.0003	20.5	0.3	0.086	12.6	0.0	2.2	1	1	1	2	2	2	2	Molydopterin	dinucleotide	binding	domain
Ig_J_chain	PF15097.1	gi|449066873|ref|YP_007433955.1|	-	0.09	12.3	0.8	0.094	12.2	0.5	1.1	1	0	0	1	1	1	0	Immunoglobulin	J	chain
tRNA-synt_2b	PF00587.20	gi|449066874|ref|YP_007433956.1|	-	8.3e-53	178.5	0.0	2e-52	177.2	0.0	1.6	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|449066874|ref|YP_007433956.1|	-	1.5e-17	63.3	0.1	3.5e-17	62.1	0.0	1.7	1	0	0	1	1	1	1	Anticodon	binding	domain
YokU	PF14122.1	gi|449066874|ref|YP_007433956.1|	-	0.054	13.2	2.3	0.36	10.5	0.0	2.7	2	0	0	2	2	2	0	YokU-like	protein
Zn-ribbon_8	PF09723.5	gi|449066874|ref|YP_007433956.1|	-	0.13	12.1	0.3	3.9	7.5	0.0	2.4	2	0	0	2	2	2	0	Zinc	ribbon	domain
zinc_ribbon_4	PF13717.1	gi|449066874|ref|YP_007433956.1|	-	0.2	11.3	0.8	16	5.3	0.0	2.6	2	0	0	2	2	2	0	zinc-ribbon	domain
Arginase	PF00491.16	gi|449066875|ref|YP_007433957.1|	-	2.3e-69	233.8	0.0	2.6e-69	233.5	0.0	1.0	1	0	0	1	1	1	1	Arginase	family
DNA_RNApol_7kD	PF03604.8	gi|449066876|ref|YP_007433958.1|	-	1.3e-06	27.7	4.1	2.6e-06	26.8	2.8	1.5	1	1	0	1	1	1	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
zinc_ribbon_2	PF13240.1	gi|449066876|ref|YP_007433958.1|	-	0.0017	17.7	0.5	0.0035	16.7	0.4	1.5	1	1	0	1	1	1	1	zinc-ribbon	domain
DUF2072	PF09845.4	gi|449066876|ref|YP_007433958.1|	-	0.0074	16.2	0.3	0.0078	16.1	0.2	1.0	1	0	0	1	1	1	1	Zn-ribbon	containing	protein	(DUF2072)
zf-ribbon_3	PF13248.1	gi|449066876|ref|YP_007433958.1|	-	0.023	13.8	0.9	0.093	11.9	0.1	2.0	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-CHY	PF05495.7	gi|449066876|ref|YP_007433958.1|	-	0.042	14.0	0.1	0.042	14.0	0.0	1.1	1	0	0	1	1	1	0	CHY	zinc	finger
DZR	PF12773.2	gi|449066876|ref|YP_007433958.1|	-	0.043	13.6	0.2	0.12	12.2	0.2	1.6	1	1	0	1	1	1	0	Double	zinc	ribbon
Zn_Tnp_IS1595	PF12760.2	gi|449066876|ref|YP_007433958.1|	-	0.044	13.5	4.4	0.1	12.4	0.1	2.1	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
Zn_ribbon_recom	PF13408.1	gi|449066876|ref|YP_007433958.1|	-	0.067	13.4	1.5	0.91	9.8	0.1	2.1	2	0	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
Mu-like_Com	PF10122.4	gi|449066876|ref|YP_007433958.1|	-	0.067	12.2	1.3	0.11	11.6	0.9	1.4	1	1	0	1	1	1	0	Mu-like	prophage	protein	Com
zf-ISL3	PF14690.1	gi|449066876|ref|YP_007433958.1|	-	0.068	13.2	0.4	0.068	13.2	0.3	2.0	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-C2H2	PF00096.21	gi|449066876|ref|YP_007433958.1|	-	0.07	13.5	1.6	7	7.2	0.1	2.2	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
DUF164	PF02591.10	gi|449066876|ref|YP_007433958.1|	-	0.09	12.6	0.4	0.13	12.0	0.3	1.3	1	1	0	1	1	1	0	Putative	zinc	ribbon	domain
Zn-ribbon_8	PF09723.5	gi|449066876|ref|YP_007433958.1|	-	0.1	12.6	1.6	0.2	11.6	1.1	1.5	1	1	0	1	1	1	0	Zinc	ribbon	domain
HypA	PF01155.14	gi|449066876|ref|YP_007433958.1|	-	0.11	12.2	0.1	0.11	12.1	0.1	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zinc_ribbon_5	PF13719.1	gi|449066876|ref|YP_007433958.1|	-	0.12	11.9	4.1	0.66	9.6	0.1	2.5	1	1	1	2	2	2	0	zinc-ribbon	domain
zf-CHCC	PF10276.4	gi|449066876|ref|YP_007433958.1|	-	0.15	11.8	2.2	0.16	11.8	1.2	1.5	1	1	0	1	1	1	0	Zinc-finger	domain
zf-Di19	PF05605.7	gi|449066876|ref|YP_007433958.1|	-	0.19	11.8	0.7	4.1	7.6	0.1	2.0	2	0	0	2	2	2	0	Drought	induced	19	protein	(Di19),	zinc-binding
zf-RING_5	PF14634.1	gi|449066876|ref|YP_007433958.1|	-	0.21	11.3	1.7	1.7	8.4	0.0	2.0	1	1	1	2	2	2	0	zinc-RING	finger	domain
zinc_ribbon_4	PF13717.1	gi|449066876|ref|YP_007433958.1|	-	0.26	11.0	4.1	1.2	8.8	0.1	2.5	1	1	1	2	2	2	0	zinc-ribbon	domain
zf-H2C2_2	PF13465.1	gi|449066876|ref|YP_007433958.1|	-	0.33	11.3	2.2	1.5	9.2	0.1	2.1	2	0	0	2	2	2	0	Zinc-finger	double	domain
OrfB_Zn_ribbon	PF07282.6	gi|449066876|ref|YP_007433958.1|	-	0.38	10.4	2.2	9.8	5.9	0.0	2.0	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
zf-BED	PF02892.10	gi|449066876|ref|YP_007433958.1|	-	0.7	9.7	4.2	1	9.2	0.9	2.0	1	1	1	2	2	2	0	BED	zinc	finger
Rubredoxin	PF00301.15	gi|449066876|ref|YP_007433958.1|	-	0.88	9.4	6.8	13	5.7	0.9	2.1	1	1	1	2	2	2	0	Rubredoxin
zf-HIT	PF04438.11	gi|449066876|ref|YP_007433958.1|	-	0.99	9.1	5.8	3.1	7.5	0.4	2.1	2	0	0	2	2	2	0	HIT	zinc	finger
UPF0547	PF10571.4	gi|449066876|ref|YP_007433958.1|	-	2.6	7.8	5.3	0.68	9.6	0.7	1.9	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
SUI1	PF01253.17	gi|449066877|ref|YP_007433959.1|	-	2.3e-26	91.3	2.1	2.7e-26	91.2	1.5	1.1	1	0	0	1	1	1	1	Translation	initiation	factor	SUI1
Img2	PF05046.9	gi|449066877|ref|YP_007433959.1|	-	0.024	14.8	0.9	0.039	14.1	0.6	1.5	1	1	0	1	1	1	0	Mitochondrial	large	subunit	ribosomal	protein	(Img2)
TFIIB	PF00382.14	gi|449066878|ref|YP_007433960.1|	-	6e-38	128.5	5.7	5.5e-20	70.9	0.6	2.2	2	0	0	2	2	2	2	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.7	gi|449066878|ref|YP_007433960.1|	-	2.5e-15	55.5	1.8	2.5e-15	55.4	0.3	1.7	2	0	0	2	2	2	1	TFIIB	zinc-binding
HTH_AsnC-type	PF13404.1	gi|449066878|ref|YP_007433960.1|	-	9.7e-06	25.0	0.1	2.8e-05	23.5	0.1	1.8	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
Sigma70_r4	PF04545.11	gi|449066878|ref|YP_007433960.1|	-	3.2e-05	23.1	2.0	0.00077	18.7	0.1	3.3	3	1	0	3	3	3	1	Sigma-70,	region	4
HTH_24	PF13412.1	gi|449066878|ref|YP_007433960.1|	-	0.00011	21.5	0.2	0.00054	19.2	0.1	2.3	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
Cyclin_C	PF02984.14	gi|449066878|ref|YP_007433960.1|	-	0.00012	21.9	0.3	0.076	12.9	0.0	2.3	1	1	1	2	2	2	2	Cyclin,	C-terminal	domain
HARE-HTH	PF05066.8	gi|449066878|ref|YP_007433960.1|	-	0.0005	20.3	0.1	1.1	9.6	0.0	2.5	2	0	0	2	2	2	2	HB1,	ASXL,	restriction	endonuclease	HTH	domain
HTH_11	PF08279.7	gi|449066878|ref|YP_007433960.1|	-	0.0022	17.5	0.2	0.0048	16.5	0.1	1.6	1	0	0	1	1	1	1	HTH	domain
Sigma70_r4_2	PF08281.7	gi|449066878|ref|YP_007433960.1|	-	0.0023	17.3	0.1	0.01	15.2	0.0	2.2	2	0	0	2	2	2	1	Sigma-70,	region	4
Cyclin_N	PF00134.18	gi|449066878|ref|YP_007433960.1|	-	0.0061	16.1	0.2	1.1	8.8	0.1	2.2	2	0	0	2	2	2	1	Cyclin,	N-terminal	domain
HTH_Tnp_ISL3	PF13542.1	gi|449066878|ref|YP_007433960.1|	-	0.0067	15.5	0.9	0.28	10.3	0.0	2.9	3	0	0	3	3	3	1	Helix-turn-helix	domain	of	transposase	family	ISL3
HHH_5	PF14520.1	gi|449066878|ref|YP_007433960.1|	-	0.0081	16.3	0.6	0.27	11.4	0.1	2.9	3	0	0	3	3	3	1	Helix-hairpin-helix	domain
HTH_23	PF13384.1	gi|449066878|ref|YP_007433960.1|	-	0.015	14.9	0.1	0.015	14.9	0.1	3.2	4	0	0	4	4	4	0	Homeodomain-like	domain
DUF3562	PF12085.3	gi|449066878|ref|YP_007433960.1|	-	0.018	14.8	0.6	0.7	9.7	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3562)
HHH	PF00633.18	gi|449066878|ref|YP_007433960.1|	-	0.054	13.2	0.1	2.6	7.9	0.0	2.7	2	0	0	2	2	2	0	Helix-hairpin-helix	motif
HTH_37	PF13744.1	gi|449066878|ref|YP_007433960.1|	-	0.13	12.1	1.7	0.36	10.6	0.1	2.5	3	0	0	3	3	2	0	Helix-turn-helix	domain
BatA	PF07584.6	gi|449066878|ref|YP_007433960.1|	-	0.13	12.4	0.0	0.28	11.3	0.0	1.5	1	0	0	1	1	1	0	Aerotolerance	regulator	N-terminal
HTH_Crp_2	PF13545.1	gi|449066878|ref|YP_007433960.1|	-	0.16	11.8	2.0	1.5	8.6	0.0	2.9	3	0	0	3	3	2	0	Crp-like	helix-turn-helix	domain
HTH_38	PF13936.1	gi|449066878|ref|YP_007433960.1|	-	1.2	8.6	3.9	2.7	7.6	0.0	3.5	3	0	0	3	3	3	0	Helix-turn-helix	domain
DUF131	PF01998.12	gi|449066879|ref|YP_007433961.1|	-	2.6e-14	52.2	9.5	2.6e-14	52.2	6.6	1.7	1	1	1	2	2	2	1	Protein	of	unknown	function	DUF131
MFS_2	PF13347.1	gi|449066879|ref|YP_007433961.1|	-	0.027	12.8	1.2	0.032	12.6	0.8	1.2	1	0	0	1	1	1	0	MFS/sugar	transport	protein
Pox_A14	PF05767.7	gi|449066879|ref|YP_007433961.1|	-	0.075	13.0	1.4	4	7.4	0.1	2.1	2	0	0	2	2	2	0	Poxvirus	virion	envelope	protein	A14
Cytochrom_B_N_2	PF13631.1	gi|449066879|ref|YP_007433961.1|	-	0.17	11.7	3.7	0.21	11.3	2.6	1.2	1	0	0	1	1	1	0	Cytochrome	b(N-terminal)/b6/petB
DUF202	PF02656.10	gi|449066879|ref|YP_007433961.1|	-	0.19	11.9	4.2	0.78	9.9	2.9	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF202)
DUF4203	PF13886.1	gi|449066879|ref|YP_007433961.1|	-	0.44	9.9	8.1	0.5	9.8	5.6	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4203)
Virul_fac_BrkB	PF03631.10	gi|449066879|ref|YP_007433961.1|	-	0.46	9.8	6.2	0.54	9.5	4.3	1.1	1	0	0	1	1	1	0	Virulence	factor	BrkB
DUF4149	PF13664.1	gi|449066879|ref|YP_007433961.1|	-	0.53	10.3	5.5	1.4	9.0	3.8	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4149)
Gram_pos_anchor	PF00746.16	gi|449066879|ref|YP_007433961.1|	-	1	9.2	5.6	3.9	7.4	0.1	2.5	2	0	0	2	2	2	0	Gram	positive	anchor
DUF485	PF04341.7	gi|449066879|ref|YP_007433961.1|	-	2.6	7.8	4.8	3.3	7.4	0.2	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF485
DUF4064	PF13273.1	gi|449066879|ref|YP_007433961.1|	-	4.3	7.4	7.9	8.2	6.5	5.5	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4064)
SSV1_ORF_D-335	PF07935.6	gi|449066880|ref|YP_007433962.1|	-	3.2e-18	65.2	1.1	4.4e-18	64.7	0.7	1.2	1	0	0	1	1	1	1	ORF	D-335-like	protein
Glycos_transf_1	PF00534.15	gi|449066881|ref|YP_007433963.1|	-	9.6e-18	64.1	0.3	3.6e-17	62.3	0.1	1.9	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|449066881|ref|YP_007433963.1|	-	3e-08	33.9	0.0	3.9e-07	30.2	0.0	2.3	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|449066881|ref|YP_007433963.1|	-	0.024	14.9	0.0	0.072	13.3	0.0	1.7	2	0	0	2	2	2	0	Glycosyl	transferases	group	1
Glycos_transf_2	PF00535.21	gi|449066882|ref|YP_007433964.1|	-	2.2e-11	43.7	0.0	2.9e-11	43.3	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.4	gi|449066882|ref|YP_007433964.1|	-	2.1e-06	27.0	0.2	1.7e-05	24.0	0.0	1.9	2	0	0	2	2	2	1	Glycosyltransferase	like	family	2
Glyco_transf_21	PF13506.1	gi|449066882|ref|YP_007433964.1|	-	0.0064	15.7	0.0	0.016	14.5	0.0	1.7	2	0	0	2	2	2	1	Glycosyl	transferase	family	21
Glyco_tranf_2_3	PF13641.1	gi|449066882|ref|YP_007433964.1|	-	0.028	14.2	0.1	0.42	10.3	0.0	2.1	2	0	0	2	2	2	0	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.1	gi|449066882|ref|YP_007433964.1|	-	0.041	14.1	0.0	0.087	13.1	0.0	1.5	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
Peptidase_M48	PF01435.13	gi|449066883|ref|YP_007433965.1|	-	3e-31	108.7	0.0	7.5e-31	107.4	0.0	1.6	1	1	0	1	1	1	1	Peptidase	family	M48
Peptidase_M56	PF05569.6	gi|449066883|ref|YP_007433965.1|	-	0.093	11.6	1.8	0.098	11.6	0.3	1.8	2	1	0	2	2	2	0	BlaR1	peptidase	M56
E1-E2_ATPase	PF00122.15	gi|449066884|ref|YP_007433966.1|	-	6.7e-54	182.3	2.4	1.2e-53	181.5	1.7	1.4	1	0	0	1	1	1	1	E1-E2	ATPase
Hydrolase	PF00702.21	gi|449066884|ref|YP_007433966.1|	-	1.3e-30	107.4	0.7	3.1e-30	106.1	0.5	1.7	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HMA	PF00403.21	gi|449066884|ref|YP_007433966.1|	-	4.8e-15	55.4	10.3	1.7e-13	50.4	2.3	3.1	2	0	0	2	2	2	2	Heavy-metal-associated	domain
HAD	PF12710.2	gi|449066884|ref|YP_007433966.1|	-	1.6e-11	44.7	0.1	5.2e-11	43.0	0.1	1.9	2	0	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.7	gi|449066884|ref|YP_007433966.1|	-	1.4e-05	24.8	7.0	0.032	13.8	0.0	3.3	3	1	1	4	4	4	2	haloacid	dehalogenase-like	hydrolase
NLPC_P60	PF00877.14	gi|449066884|ref|YP_007433966.1|	-	0.014	15.1	0.0	0.5	10.2	0.0	2.5	2	0	0	2	2	2	0	NlpC/P60	family
Glyco_trans_4_2	PF13477.1	gi|449066884|ref|YP_007433966.1|	-	0.016	15.0	2.1	0.3	10.9	0.0	2.8	3	0	0	3	3	3	0	Glycosyl	transferase	4-like
Hydrolase_6	PF13344.1	gi|449066884|ref|YP_007433966.1|	-	0.026	14.3	0.0	0.12	12.2	0.0	2.1	2	0	0	2	2	2	0	Haloacid	dehalogenase-like	hydrolase
YHS	PF04945.8	gi|449066885|ref|YP_007433967.1|	-	4.4e-19	68.0	3.0	5.4e-19	67.7	2.1	1.0	1	0	0	1	1	1	1	YHS	domain
Arc_trans_TRASH	PF08394.5	gi|449066885|ref|YP_007433967.1|	-	6e-05	23.1	1.7	8.4e-05	22.6	1.2	1.2	1	0	0	1	1	1	1	Archaeal	TRASH	domain
zf-FCS	PF06467.9	gi|449066885|ref|YP_007433967.1|	-	0.00087	18.8	1.4	0.0014	18.2	1.0	1.4	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
ATPase-cat_bd	PF12156.3	gi|449066885|ref|YP_007433967.1|	-	0.087	13.3	0.1	0.099	13.1	0.1	1.1	1	0	0	1	1	1	0	Putative	metal-binding	domain	of	cation	transport	ATPase
DUF2116	PF09889.4	gi|449066885|ref|YP_007433967.1|	-	0.089	12.5	1.5	0.38	10.5	1.1	1.9	1	1	0	1	1	1	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
Arc_trans_TRASH	PF08394.5	gi|449066886|ref|YP_007433968.1|	-	8.1e-20	70.6	8.7	1.7e-19	69.6	6.0	1.6	1	0	0	1	1	1	1	Archaeal	TRASH	domain
HTH_11	PF08279.7	gi|449066886|ref|YP_007433968.1|	-	6.7e-08	32.0	0.7	1.7e-07	30.7	0.5	1.6	1	0	0	1	1	1	1	HTH	domain
HTH_AsnC-type	PF13404.1	gi|449066886|ref|YP_007433968.1|	-	1.6e-06	27.5	0.2	2.9e-06	26.7	0.2	1.5	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_24	PF13412.1	gi|449066886|ref|YP_007433968.1|	-	1.9e-06	27.1	0.9	1.9e-06	27.1	0.6	1.7	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.2	gi|449066886|ref|YP_007433968.1|	-	2e-05	24.1	0.0	3.1e-05	23.5	0.0	1.3	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.17	gi|449066886|ref|YP_007433968.1|	-	2.9e-05	23.6	0.2	4.8e-05	22.9	0.1	1.4	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|449066886|ref|YP_007433968.1|	-	5.1e-05	22.9	0.2	0.00011	21.7	0.2	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_38	PF13936.1	gi|449066886|ref|YP_007433968.1|	-	0.0018	17.7	0.2	0.0048	16.4	0.1	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|449066886|ref|YP_007433968.1|	-	0.0046	16.5	0.1	0.011	15.3	0.1	1.7	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_20	PF12840.2	gi|449066886|ref|YP_007433968.1|	-	0.0059	16.3	0.0	0.0059	16.3	0.0	1.9	3	0	0	3	3	2	1	Helix-turn-helix	domain
Penicillinase_R	PF03965.11	gi|449066886|ref|YP_007433968.1|	-	0.0062	16.6	0.1	0.014	15.5	0.0	1.7	1	0	0	1	1	1	1	Penicillinase	repressor
HTH_6	PF01418.12	gi|449066886|ref|YP_007433968.1|	-	0.0086	15.7	0.4	0.017	14.8	0.3	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain,	rpiR	family
HTH_5	PF01022.15	gi|449066886|ref|YP_007433968.1|	-	0.0097	15.5	0.1	0.022	14.4	0.1	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_36	PF13730.1	gi|449066886|ref|YP_007433968.1|	-	0.011	15.8	0.3	0.03	14.4	0.2	1.8	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_27	PF13463.1	gi|449066886|ref|YP_007433968.1|	-	0.012	15.8	0.1	0.019	15.2	0.1	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_28	PF13518.1	gi|449066886|ref|YP_007433968.1|	-	0.016	15.1	0.2	0.044	13.7	0.1	1.9	2	0	0	2	2	1	0	Helix-turn-helix	domain
Mga	PF05043.8	gi|449066886|ref|YP_007433968.1|	-	0.03	14.5	0.6	0.067	13.4	0.1	1.7	2	0	0	2	2	2	0	Mga	helix-turn-helix	domain
HTH_29	PF13551.1	gi|449066886|ref|YP_007433968.1|	-	0.032	14.3	0.0	0.053	13.6	0.0	1.4	1	0	0	1	1	1	0	Winged	helix-turn	helix
HTH_7	PF02796.10	gi|449066886|ref|YP_007433968.1|	-	0.041	13.7	0.1	0.11	12.3	0.1	1.8	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	resolvase
Fe_dep_repress	PF01325.14	gi|449066886|ref|YP_007433968.1|	-	0.041	13.8	0.4	0.087	12.7	0.2	1.5	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Trp_repressor	PF01371.14	gi|449066886|ref|YP_007433968.1|	-	0.071	13.0	0.2	0.2	11.5	0.2	1.7	1	0	0	1	1	1	0	Trp	repressor	protein
HTH_34	PF13601.1	gi|449066886|ref|YP_007433968.1|	-	0.072	13.1	0.2	0.18	11.8	0.1	1.7	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
HTH_Crp_2	PF13545.1	gi|449066886|ref|YP_007433968.1|	-	0.079	12.7	0.1	0.16	11.7	0.0	1.4	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
DUF2250	PF10007.4	gi|449066886|ref|YP_007433968.1|	-	0.11	12.4	1.9	0.18	11.7	0.1	2.0	2	1	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
GntR	PF00392.16	gi|449066886|ref|YP_007433968.1|	-	0.12	11.7	0.0	0.27	10.6	0.0	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
HTH_10	PF04967.7	gi|449066886|ref|YP_007433968.1|	-	0.21	11.1	2.4	0.63	9.6	0.4	2.5	3	0	0	3	3	3	0	HTH	DNA	binding	domain
zf-FCS	PF06467.9	gi|449066886|ref|YP_007433968.1|	-	8.3	6.1	9.3	3.3	7.4	3.9	2.2	2	1	1	3	3	2	0	MYM-type	Zinc	finger	with	FCS	sequence	motif
AAA	PF00004.24	gi|449066888|ref|YP_007433970.1|	-	6.6e-77	256.0	0.0	2.4e-37	128.0	0.0	2.6	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_17	PF13207.1	gi|449066888|ref|YP_007433970.1|	-	1.7e-19	70.8	0.5	3.9e-08	34.1	0.0	3.5	2	2	0	2	2	2	2	AAA	domain
RuvB_N	PF05496.7	gi|449066888|ref|YP_007433970.1|	-	1e-15	57.4	0.0	1.2e-08	34.2	0.0	2.6	2	0	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_22	PF13401.1	gi|449066888|ref|YP_007433970.1|	-	1.5e-15	57.5	4.9	0.00041	20.5	0.0	4.9	3	2	2	5	5	4	3	AAA	domain
AAA_14	PF13173.1	gi|449066888|ref|YP_007433970.1|	-	1.5e-14	54.0	0.0	3e-07	30.3	0.0	2.8	2	0	0	2	2	2	2	AAA	domain
AAA_18	PF13238.1	gi|449066888|ref|YP_007433970.1|	-	7.5e-14	52.1	0.0	7.5e-06	26.2	0.0	2.9	2	0	0	2	2	2	2	AAA	domain
AAA_5	PF07728.9	gi|449066888|ref|YP_007433970.1|	-	1.4e-13	50.7	0.3	5.5e-05	22.9	0.0	4.0	2	2	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
AAA_33	PF13671.1	gi|449066888|ref|YP_007433970.1|	-	6.5e-13	48.7	0.0	1.2e-05	25.2	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
DUF815	PF05673.8	gi|449066888|ref|YP_007433970.1|	-	4.6e-12	45.4	0.0	1.4e-05	24.1	0.0	2.4	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
TIP49	PF06068.8	gi|449066888|ref|YP_007433970.1|	-	8.3e-12	44.5	0.5	6.5e-05	21.8	0.0	2.5	3	0	0	3	3	2	2	TIP49	C-terminus
Zeta_toxin	PF06414.7	gi|449066888|ref|YP_007433970.1|	-	2.3e-11	43.1	0.0	0.00011	21.3	0.1	2.5	2	1	0	2	2	2	2	Zeta	toxin
AAA_16	PF13191.1	gi|449066888|ref|YP_007433970.1|	-	6.6e-10	39.2	0.2	0.00017	21.6	0.0	3.4	2	2	0	2	2	2	2	AAA	ATPase	domain
IstB_IS21	PF01695.12	gi|449066888|ref|YP_007433970.1|	-	7.1e-10	38.5	0.1	0.00074	18.9	0.0	2.8	3	0	0	3	3	2	2	IstB-like	ATP	binding	protein
AAA_2	PF07724.9	gi|449066888|ref|YP_007433970.1|	-	2.9e-09	37.0	0.0	3.3e-05	23.8	0.0	2.9	2	1	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
RNA_helicase	PF00910.17	gi|449066888|ref|YP_007433970.1|	-	7.3e-09	35.7	0.0	0.0027	17.8	0.0	3.2	3	0	0	3	3	2	2	RNA	helicase
AAA_28	PF13521.1	gi|449066888|ref|YP_007433970.1|	-	8.5e-09	35.5	0.0	0.0033	17.4	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
AAA_19	PF13245.1	gi|449066888|ref|YP_007433970.1|	-	3e-08	33.2	0.0	0.0058	16.3	0.0	2.5	2	0	0	2	2	2	2	Part	of	AAA	domain
AAA_24	PF13479.1	gi|449066888|ref|YP_007433970.1|	-	3.4e-08	33.3	0.3	0.0046	16.5	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
AAA_25	PF13481.1	gi|449066888|ref|YP_007433970.1|	-	9.2e-08	31.7	3.6	0.16	11.3	0.1	4.2	3	1	1	4	4	4	2	AAA	domain
SKI	PF01202.17	gi|449066888|ref|YP_007433970.1|	-	5e-07	29.7	0.0	0.031	14.1	0.0	2.6	2	0	0	2	2	2	2	Shikimate	kinase
Mg_chelatase	PF01078.16	gi|449066888|ref|YP_007433970.1|	-	9e-07	28.2	0.0	0.032	13.4	0.0	2.4	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
Parvo_NS1	PF01057.12	gi|449066888|ref|YP_007433970.1|	-	9.2e-07	27.9	0.1	0.032	13.1	0.0	2.2	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
Arch_ATPase	PF01637.13	gi|449066888|ref|YP_007433970.1|	-	1.3e-06	28.3	0.2	0.075	12.7	0.0	3.4	2	2	1	3	3	3	2	Archaeal	ATPase
Sigma54_activ_2	PF14532.1	gi|449066888|ref|YP_007433970.1|	-	1.9e-06	27.9	0.0	0.13	12.3	0.0	3.2	3	0	0	3	3	3	2	Sigma-54	interaction	domain
ABC_tran	PF00005.22	gi|449066888|ref|YP_007433970.1|	-	2.3e-06	27.9	0.0	0.082	13.1	0.0	2.5	2	0	0	2	2	2	2	ABC	transporter
KTI12	PF08433.5	gi|449066888|ref|YP_007433970.1|	-	3.2e-06	26.5	0.0	0.069	12.3	0.0	2.8	3	0	0	3	3	2	2	Chromatin	associated	protein	KTI12
UPF0079	PF02367.12	gi|449066888|ref|YP_007433970.1|	-	1e-05	25.1	0.0	0.12	11.9	0.0	2.9	3	0	0	3	3	2	2	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_3	PF07726.6	gi|449066888|ref|YP_007433970.1|	-	1.1e-05	25.0	0.0	0.13	11.9	0.0	2.9	2	1	1	3	3	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
NTPase_1	PF03266.10	gi|449066888|ref|YP_007433970.1|	-	1.3e-05	25.0	2.3	0.3	10.7	0.0	4.3	4	1	1	5	5	4	2	NTPase
NACHT	PF05729.7	gi|449066888|ref|YP_007433970.1|	-	1.6e-05	24.6	0.3	0.43	10.2	0.0	3.6	3	1	1	4	4	4	2	NACHT	domain
Vps4_C	PF09336.5	gi|449066888|ref|YP_007433970.1|	-	2.2e-05	24.2	0.1	0.14	12.0	0.0	2.7	2	0	0	2	2	2	2	Vps4	C	terminal	oligomerisation	domain
Bac_DnaA	PF00308.13	gi|449066888|ref|YP_007433970.1|	-	2.9e-05	23.8	0.0	0.027	14.1	0.0	3.1	2	1	0	2	2	2	1	Bacterial	dnaA	protein
CPT	PF07931.7	gi|449066888|ref|YP_007433970.1|	-	3.2e-05	23.6	0.0	0.094	12.3	0.0	2.3	2	0	0	2	2	2	2	Chloramphenicol	phosphotransferase-like	protein
KaiC	PF06745.8	gi|449066888|ref|YP_007433970.1|	-	7.5e-05	21.9	2.7	2.4	7.2	0.1	4.2	2	2	2	4	4	4	0	KaiC
AAA_11	PF13086.1	gi|449066888|ref|YP_007433970.1|	-	9.1e-05	22.1	0.0	0.33	10.4	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
PhoH	PF02562.11	gi|449066888|ref|YP_007433970.1|	-	9.4e-05	21.7	0.1	0.23	10.6	0.0	2.5	2	0	0	2	2	2	2	PhoH-like	protein
Sigma54_activat	PF00158.21	gi|449066888|ref|YP_007433970.1|	-	0.00015	21.2	0.0	1.1	8.6	0.0	3.2	4	0	0	4	4	2	2	Sigma-54	interaction	domain
AAA_30	PF13604.1	gi|449066888|ref|YP_007433970.1|	-	0.00017	21.2	0.0	0.7	9.4	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
KAP_NTPase	PF07693.9	gi|449066888|ref|YP_007433970.1|	-	0.00028	19.9	1.1	0.38	9.6	0.0	3.6	2	2	2	4	4	4	1	KAP	family	P-loop	domain
NB-ARC	PF00931.17	gi|449066888|ref|YP_007433970.1|	-	0.00033	19.6	0.1	0.64	8.8	0.0	2.6	2	0	0	2	2	2	2	NB-ARC	domain
AAA_23	PF13476.1	gi|449066888|ref|YP_007433970.1|	-	0.00035	20.9	4.2	0.48	10.7	0.1	2.9	1	1	0	2	2	2	2	AAA	domain
Cytidylate_kin2	PF13189.1	gi|449066888|ref|YP_007433970.1|	-	0.00065	19.6	0.0	0.17	11.7	0.0	2.5	2	0	0	2	2	2	1	Cytidylate	kinase-like	family
DUF258	PF03193.11	gi|449066888|ref|YP_007433970.1|	-	0.00081	18.6	0.0	1.4	8.1	0.0	2.4	2	0	0	2	2	2	2	Protein	of	unknown	function,	DUF258
IPT	PF01745.11	gi|449066888|ref|YP_007433970.1|	-	0.00091	18.4	0.0	0.27	10.3	0.0	2.4	2	0	0	2	2	2	1	Isopentenyl	transferase
T2SE	PF00437.15	gi|449066888|ref|YP_007433970.1|	-	0.001	18.0	0.0	0.49	9.2	0.0	2.4	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
ResIII	PF04851.10	gi|449066888|ref|YP_007433970.1|	-	0.0015	18.3	0.0	1.4	8.6	0.0	2.6	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Guanylate_kin	PF00625.16	gi|449066888|ref|YP_007433970.1|	-	0.0017	17.8	0.0	1.9	7.8	0.0	2.7	2	0	0	2	2	2	1	Guanylate	kinase
AAA_10	PF12846.2	gi|449066888|ref|YP_007433970.1|	-	0.0019	17.7	0.6	7.5	5.8	0.0	4.0	3	1	1	4	4	4	0	AAA-like	domain
MMR_HSR1	PF01926.18	gi|449066888|ref|YP_007433970.1|	-	0.0019	18.1	0.0	2.8	7.9	0.0	2.8	2	0	0	2	2	2	0	50S	ribosome-binding	GTPase
ATP-synt_ab	PF00006.20	gi|449066888|ref|YP_007433970.1|	-	0.0025	17.3	0.0	1.6	8.1	0.0	2.4	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
PduV-EutP	PF10662.4	gi|449066888|ref|YP_007433970.1|	-	0.0026	17.2	0.0	2.7	7.4	0.0	2.4	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
DUF2075	PF09848.4	gi|449066888|ref|YP_007433970.1|	-	0.0029	16.6	0.0	0.72	8.7	0.0	2.3	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
APS_kinase	PF01583.15	gi|449066888|ref|YP_007433970.1|	-	0.0033	17.1	0.0	1.6	8.3	0.0	2.4	2	0	0	2	2	2	1	Adenylylsulphate	kinase
Rad17	PF03215.10	gi|449066888|ref|YP_007433970.1|	-	0.0036	16.0	0.0	1.4	7.5	0.0	2.4	2	0	0	2	2	2	1	Rad17	cell	cycle	checkpoint	protein
MobB	PF03205.9	gi|449066888|ref|YP_007433970.1|	-	0.0037	16.9	0.0	3.2	7.4	0.0	2.5	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
6PF2K	PF01591.13	gi|449066888|ref|YP_007433970.1|	-	0.0039	16.2	0.0	0.13	11.3	0.0	2.5	2	0	0	2	2	2	1	6-phosphofructo-2-kinase
AAA_29	PF13555.1	gi|449066888|ref|YP_007433970.1|	-	0.0094	15.4	0.0	3.9	7.0	0.0	2.5	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
ADK	PF00406.17	gi|449066888|ref|YP_007433970.1|	-	0.011	15.6	0.0	7	6.5	0.0	3.1	3	0	0	3	3	3	0	Adenylate	kinase
Miro	PF08477.8	gi|449066888|ref|YP_007433970.1|	-	0.013	15.9	0.0	11	6.5	0.0	3.1	2	1	0	2	2	2	0	Miro-like	protein
AAA_21	PF13304.1	gi|449066888|ref|YP_007433970.1|	-	0.013	15.4	13.0	0.31	10.9	0.6	3.7	3	2	0	3	3	2	0	AAA	domain
PPV_E1_C	PF00519.12	gi|449066888|ref|YP_007433970.1|	-	0.014	14.0	0.0	2.4	6.6	0.0	2.2	2	0	0	2	2	2	0	Papillomavirus	helicase
SRP54	PF00448.17	gi|449066888|ref|YP_007433970.1|	-	0.014	14.8	0.0	4.1	6.8	0.0	2.7	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
Torsin	PF06309.6	gi|449066888|ref|YP_007433970.1|	-	0.022	14.6	0.0	3.4	7.5	0.0	2.3	2	0	0	2	2	2	0	Torsin
ArgK	PF03308.11	gi|449066888|ref|YP_007433970.1|	-	0.045	12.5	0.0	2.1	7.0	0.0	2.2	2	0	0	2	2	2	0	ArgK	protein
Gtr1_RagA	PF04670.7	gi|449066888|ref|YP_007433970.1|	-	0.05	12.7	0.1	10	5.2	0.0	3.0	3	0	0	3	3	2	0	Gtr1/RagA	G	protein	conserved	region
Thymidylate_kin	PF02223.12	gi|449066888|ref|YP_007433970.1|	-	0.053	12.9	0.0	3.9	6.8	0.0	2.3	2	0	0	2	2	2	0	Thymidylate	kinase
SRPRB	PF09439.5	gi|449066888|ref|YP_007433970.1|	-	0.066	12.4	0.0	13	4.9	0.0	2.4	2	0	0	2	2	2	0	Signal	recognition	particle	receptor	beta	subunit
MCM	PF00493.18	gi|449066888|ref|YP_007433970.1|	-	0.082	11.6	0.1	4.5	5.9	0.0	2.8	3	0	0	3	3	3	0	MCM2/3/5	family
Viral_helicase1	PF01443.13	gi|449066888|ref|YP_007433970.1|	-	0.087	12.3	0.0	14	5.1	0.0	2.3	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
cobW	PF02492.14	gi|449066888|ref|YP_007433970.1|	-	0.088	12.2	0.2	9.6	5.6	0.0	2.5	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
ATP_bind_1	PF03029.12	gi|449066888|ref|YP_007433970.1|	-	0.16	11.4	0.0	67	2.9	0.0	3.4	4	0	0	4	4	3	0	Conserved	hypothetical	ATP	binding	protein
DUF445	PF04286.7	gi|449066889|ref|YP_007433971.1|	-	0.48	9.8	1.5	0.63	9.5	1.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF445)
SPW	PF03779.9	gi|449066889|ref|YP_007433971.1|	-	2.7	7.4	11.1	0.17	11.2	1.9	3.0	3	0	0	3	3	3	0	SPW	repeat
ABC_tran	PF00005.22	gi|449066891|ref|YP_007433973.1|	-	3.1e-30	105.2	0.1	1.3e-14	54.6	0.0	3.3	2	1	1	3	3	3	3	ABC	transporter
AAA_21	PF13304.1	gi|449066891|ref|YP_007433973.1|	-	2e-17	64.1	16.1	3.2e-06	27.3	0.0	4.6	2	2	3	5	5	5	4	AAA	domain
NB-ARC	PF00931.17	gi|449066891|ref|YP_007433973.1|	-	3.5e-08	32.6	0.0	0.0042	15.9	0.0	2.4	2	0	0	2	2	2	2	NB-ARC	domain
AAA_22	PF13401.1	gi|449066891|ref|YP_007433973.1|	-	5.6e-08	32.9	0.0	0.00079	19.5	0.0	2.6	2	1	0	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|449066891|ref|YP_007433973.1|	-	7.5e-08	31.8	13.4	0.0067	15.5	0.1	3.2	1	1	2	3	3	3	2	AAA	ATPase	domain
AAA_17	PF13207.1	gi|449066891|ref|YP_007433973.1|	-	1.1e-06	29.4	2.0	0.019	15.7	0.0	2.9	2	1	0	2	2	2	2	AAA	domain
AAA_29	PF13555.1	gi|449066891|ref|YP_007433973.1|	-	1.5e-06	27.6	0.1	0.018	14.5	0.0	2.4	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
Miro	PF08477.8	gi|449066891|ref|YP_007433973.1|	-	1.6e-06	28.6	0.0	0.048	14.1	0.0	2.5	2	0	0	2	2	2	2	Miro-like	protein
SRP54	PF00448.17	gi|449066891|ref|YP_007433973.1|	-	2.1e-06	27.3	0.7	0.0059	16.0	0.1	2.4	2	0	0	2	2	2	2	SRP54-type	protein,	GTPase	domain
MobB	PF03205.9	gi|449066891|ref|YP_007433973.1|	-	3.4e-06	26.8	4.5	0.032	13.9	0.3	2.9	3	0	0	3	3	2	2	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Zeta_toxin	PF06414.7	gi|449066891|ref|YP_007433973.1|	-	4.2e-06	26.0	0.0	0.0085	15.2	0.0	2.6	2	0	0	2	2	2	2	Zeta	toxin
NACHT	PF05729.7	gi|449066891|ref|YP_007433973.1|	-	7.3e-06	25.7	1.4	0.03	14.0	0.0	2.7	2	1	1	3	3	3	2	NACHT	domain
UPF0079	PF02367.12	gi|449066891|ref|YP_007433973.1|	-	9.1e-06	25.3	0.1	0.12	11.9	0.0	2.4	2	0	0	2	2	2	2	Uncharacterised	P-loop	hydrolase	UPF0079
SMC_N	PF02463.14	gi|449066891|ref|YP_007433973.1|	-	1.5e-05	24.3	4.8	0.093	11.9	0.1	3.8	3	1	0	4	4	4	2	RecF/RecN/SMC	N	terminal	domain
AAA	PF00004.24	gi|449066891|ref|YP_007433973.1|	-	1.7e-05	25.0	2.1	0.024	14.8	0.1	3.1	2	2	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.1	gi|449066891|ref|YP_007433973.1|	-	2e-05	24.6	0.1	0.12	12.3	0.0	2.3	2	0	0	2	2	2	2	AAA	ATPase	domain
Arch_ATPase	PF01637.13	gi|449066891|ref|YP_007433973.1|	-	2.5e-05	24.1	3.5	0.015	15.0	0.1	2.8	2	1	0	2	2	2	2	Archaeal	ATPase
AAA_14	PF13173.1	gi|449066891|ref|YP_007433973.1|	-	3.8e-05	23.5	4.7	0.019	14.8	0.1	3.5	2	2	0	2	2	2	2	AAA	domain
AAA_33	PF13671.1	gi|449066891|ref|YP_007433973.1|	-	5e-05	23.1	0.1	0.12	12.3	0.1	2.6	2	1	0	2	2	2	2	AAA	domain
DUF258	PF03193.11	gi|449066891|ref|YP_007433973.1|	-	7.7e-05	21.9	0.0	0.07	12.3	0.0	2.3	2	0	0	2	2	2	2	Protein	of	unknown	function,	DUF258
AAA_24	PF13479.1	gi|449066891|ref|YP_007433973.1|	-	8.3e-05	22.2	0.0	0.12	11.9	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
MMR_HSR1	PF01926.18	gi|449066891|ref|YP_007433973.1|	-	0.00013	21.8	1.0	0.37	10.7	0.0	2.7	2	1	0	2	2	2	2	50S	ribosome-binding	GTPase
Pox_A32	PF04665.7	gi|449066891|ref|YP_007433973.1|	-	0.00015	21.1	0.0	0.46	9.7	0.0	2.5	2	0	0	2	2	2	2	Poxvirus	A32	protein
cobW	PF02492.14	gi|449066891|ref|YP_007433973.1|	-	0.00015	21.2	0.1	0.039	13.3	0.0	2.3	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
NTPase_1	PF03266.10	gi|449066891|ref|YP_007433973.1|	-	0.0002	21.0	4.4	0.55	9.9	0.3	3.4	2	1	1	3	3	3	2	NTPase
AAA_10	PF12846.2	gi|449066891|ref|YP_007433973.1|	-	0.00021	20.8	0.0	0.3	10.4	0.0	2.4	2	0	0	2	2	2	2	AAA-like	domain
AAA_19	PF13245.1	gi|449066891|ref|YP_007433973.1|	-	0.00028	20.5	0.0	0.58	9.9	0.0	2.4	2	0	0	2	2	2	2	Part	of	AAA	domain
AAA_18	PF13238.1	gi|449066891|ref|YP_007433973.1|	-	0.00046	20.5	5.8	0.058	13.7	0.0	3.2	2	2	0	2	2	2	1	AAA	domain
AAA_25	PF13481.1	gi|449066891|ref|YP_007433973.1|	-	0.00085	18.7	0.0	0.28	10.5	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
RNA_helicase	PF00910.17	gi|449066891|ref|YP_007433973.1|	-	0.0011	19.1	0.0	0.62	10.2	0.0	2.8	2	0	0	2	2	2	1	RNA	helicase
AAA_23	PF13476.1	gi|449066891|ref|YP_007433973.1|	-	0.0019	18.5	13.0	1.2	9.4	0.1	3.1	1	1	1	2	2	2	2	AAA	domain
Viral_helicase1	PF01443.13	gi|449066891|ref|YP_007433973.1|	-	0.0021	17.6	0.0	0.89	9.0	0.0	2.3	2	0	0	2	2	2	1	Viral	(Superfamily	1)	RNA	helicase
PduV-EutP	PF10662.4	gi|449066891|ref|YP_007433973.1|	-	0.0024	17.3	0.9	1.8	8.0	0.0	2.8	3	0	0	3	3	3	1	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_5	PF07728.9	gi|449066891|ref|YP_007433973.1|	-	0.0026	17.5	0.1	1.5	8.5	0.0	2.6	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_30	PF13604.1	gi|449066891|ref|YP_007433973.1|	-	0.0036	16.9	0.0	3.3	7.2	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
G-alpha	PF00503.15	gi|449066891|ref|YP_007433973.1|	-	0.0043	15.7	0.3	0.057	12.1	0.0	2.0	1	1	0	2	2	2	1	G-protein	alpha	subunit
T2SE	PF00437.15	gi|449066891|ref|YP_007433973.1|	-	0.008	15.0	0.0	3	6.6	0.0	2.4	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
AAA_28	PF13521.1	gi|449066891|ref|YP_007433973.1|	-	0.011	15.7	0.0	2.5	8.0	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
TrwB_AAD_bind	PF10412.4	gi|449066891|ref|YP_007433973.1|	-	0.015	13.9	0.0	2.5	6.6	0.0	3.0	3	0	0	3	3	3	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
Septin	PF00735.13	gi|449066891|ref|YP_007433973.1|	-	0.016	14.2	0.4	3.3	6.6	0.0	2.7	3	0	0	3	3	2	0	Septin
SbcCD_C	PF13558.1	gi|449066891|ref|YP_007433973.1|	-	0.027	14.3	0.0	0.26	11.2	0.0	2.5	2	2	0	2	2	2	0	Putative	exonuclease	SbcCD,	C	subunit
GTP_EFTU	PF00009.22	gi|449066891|ref|YP_007433973.1|	-	0.03	13.7	0.0	1.7	8.0	0.0	2.4	2	0	0	2	2	2	0	Elongation	factor	Tu	GTP	binding	domain
ArgK	PF03308.11	gi|449066891|ref|YP_007433973.1|	-	0.05	12.3	0.0	5.7	5.6	0.0	2.3	2	0	0	2	2	2	0	ArgK	protein
ATP-synt_ab	PF00006.20	gi|449066891|ref|YP_007433973.1|	-	0.11	11.9	0.0	3.2	7.2	0.0	2.2	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP_bind_1	PF03029.12	gi|449066891|ref|YP_007433973.1|	-	0.11	11.9	0.1	6	6.3	0.0	2.4	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
Baculo_LEF-11	PF06385.7	gi|449066892|ref|YP_007433974.1|	-	0.24	11.4	2.6	0.24	11.5	0.5	2.0	2	0	0	2	2	2	0	Baculovirus	LEF-11	protein
HTH_45	PF14947.1	gi|449066893|ref|YP_007433975.1|	-	1.8e-28	98.1	5.3	2.2e-28	97.8	3.6	1.1	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_24	PF13412.1	gi|449066893|ref|YP_007433975.1|	-	0.00022	20.5	1.7	0.00036	19.8	0.2	1.9	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
DUF4364	PF14277.1	gi|449066893|ref|YP_007433975.1|	-	0.0014	18.2	0.4	0.0016	18.0	0.3	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
Topoisom_bac	PF01131.15	gi|449066893|ref|YP_007433975.1|	-	0.011	14.6	0.3	0.014	14.2	0.2	1.1	1	0	0	1	1	1	0	DNA	topoisomerase
DUF3116	PF11313.3	gi|449066893|ref|YP_007433975.1|	-	0.053	13.1	0.8	3.7	7.2	0.0	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3116)
DUF2119	PF09892.4	gi|449066893|ref|YP_007433975.1|	-	0.089	12.0	0.4	0.22	10.8	0.1	1.6	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2119)
DUF3993	PF13158.1	gi|449066893|ref|YP_007433975.1|	-	0.12	12.1	0.1	0.15	11.9	0.1	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3993)
Ammonium_transp	PF00909.16	gi|449066894|ref|YP_007433976.1|	-	2e-94	316.3	25.0	2.3e-94	316.1	17.4	1.0	1	0	0	1	1	1	1	Ammonium	Transporter	Family
Metallophos	PF00149.23	gi|449066895|ref|YP_007433977.1|	-	8.5e-23	80.7	0.7	1.2e-22	80.2	0.5	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|449066895|ref|YP_007433977.1|	-	3.8e-07	30.0	0.0	4.5e-07	29.8	0.0	1.3	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
MR_MLE_C	PF13378.1	gi|449066896|ref|YP_007433978.1|	-	2.4e-23	82.1	0.0	4e-23	81.5	0.0	1.4	1	0	0	1	1	1	1	Enolase	C-terminal	domain-like
MR_MLE_N	PF02746.11	gi|449066896|ref|YP_007433978.1|	-	4.2e-15	55.7	0.0	8e-15	54.8	0.0	1.4	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	N-terminal	domain
MR_MLE	PF01188.16	gi|449066896|ref|YP_007433978.1|	-	4.5e-11	43.1	0.1	1.3e-10	41.6	0.0	1.9	2	0	0	2	2	2	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
Sugar_tr	PF00083.19	gi|449066897|ref|YP_007433979.1|	-	8.5e-54	182.8	25.6	1.1e-53	182.4	17.8	1.1	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|449066897|ref|YP_007433979.1|	-	1.3e-30	106.2	36.4	2.5e-25	88.9	22.5	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
BT1	PF03092.11	gi|449066897|ref|YP_007433979.1|	-	0.1	11.2	10.9	0.28	9.8	7.5	1.8	1	1	0	1	1	1	0	BT1	family
Usp	PF00582.21	gi|449066898|ref|YP_007433980.1|	-	3.4e-27	95.3	0.3	3.9e-27	95.1	0.2	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
Amidohydro_1	PF01979.15	gi|449066899|ref|YP_007433981.1|	-	1.2e-30	107.3	0.1	1.5e-30	107.0	0.0	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|449066899|ref|YP_007433981.1|	-	2.3e-10	40.1	1.1	1e-09	38.0	0.4	2.6	2	1	0	2	2	2	1	Amidohydrolase
Amidohydro_4	PF13147.1	gi|449066899|ref|YP_007433981.1|	-	4.5e-10	40.0	0.0	1.9e-08	34.6	0.0	2.1	1	1	0	1	1	1	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|449066899|ref|YP_007433981.1|	-	1.2e-09	37.9	0.0	4e-07	29.6	0.0	2.6	2	1	0	2	2	2	2	Amidohydrolase	family
A_deaminase	PF00962.17	gi|449066899|ref|YP_007433981.1|	-	0.0032	16.4	0.0	0.0062	15.5	0.0	1.4	1	0	0	1	1	1	1	Adenosine/AMP	deaminase
Polysacc_deac_2	PF04748.8	gi|449066899|ref|YP_007433981.1|	-	0.11	11.4	0.0	0.17	10.8	0.0	1.3	1	0	0	1	1	1	0	Divergent	polysaccharide	deacetylase
UPF0147	PF03685.8	gi|449066900|ref|YP_007433982.1|	-	9.2e-40	134.4	1.8	1e-39	134.2	1.3	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0147)
UPF0253	PF06786.7	gi|449066900|ref|YP_007433982.1|	-	0.0023	17.9	0.1	0.22	11.6	0.0	2.2	1	1	1	2	2	2	2	Uncharacterised	protein	family	(UPF0253)
HEAT_2	PF13646.1	gi|449066900|ref|YP_007433982.1|	-	0.026	14.7	0.2	0.081	13.2	0.1	1.9	1	1	0	1	1	1	0	HEAT	repeats
Auto_anti-p27	PF06677.7	gi|449066901|ref|YP_007433983.1|	-	1.1e-17	63.4	0.3	1.7e-17	62.9	0.2	1.3	1	0	0	1	1	1	1	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
DUF592	PF04574.8	gi|449066901|ref|YP_007433983.1|	-	0.018	14.6	1.0	0.023	14.2	0.7	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF592)
RPA_interact_C	PF14768.1	gi|449066901|ref|YP_007433983.1|	-	0.044	14.1	0.1	0.059	13.7	0.0	1.3	1	0	0	1	1	1	0	Replication	protein	A	interacting	C-terminal
Cdc6_C	PF09079.6	gi|449066901|ref|YP_007433983.1|	-	0.07	12.8	0.0	0.12	12.1	0.0	1.3	1	0	0	1	1	1	0	CDC6,	C	terminal
ArsC	PF03960.10	gi|449066901|ref|YP_007433983.1|	-	0.073	13.1	0.2	0.47	10.5	0.1	2.0	2	0	0	2	2	2	0	ArsC	family
Thymidylate_kin	PF02223.12	gi|449066902|ref|YP_007433984.1|	-	1.1e-41	142.2	0.2	1.3e-41	142.0	0.1	1.0	1	0	0	1	1	1	1	Thymidylate	kinase
AAA_18	PF13238.1	gi|449066902|ref|YP_007433984.1|	-	8.2e-06	26.1	3.0	1.1e-05	25.6	0.3	2.2	1	1	1	2	2	2	1	AAA	domain
dNK	PF01712.14	gi|449066902|ref|YP_007433984.1|	-	3.8e-05	23.6	1.2	6e-05	22.9	0.8	1.4	1	0	0	1	1	1	1	Deoxynucleoside	kinase
SKI	PF01202.17	gi|449066902|ref|YP_007433984.1|	-	0.0022	17.8	0.3	0.21	11.4	0.1	2.1	2	0	0	2	2	2	1	Shikimate	kinase
NTNH_C	PF08470.5	gi|449066902|ref|YP_007433984.1|	-	0.014	15.0	0.9	0.014	15.0	0.6	1.6	2	0	0	2	2	2	0	Nontoxic	nonhaemagglutinin	C-terminal
AAA_33	PF13671.1	gi|449066902|ref|YP_007433984.1|	-	0.02	14.7	0.0	0.3	10.9	0.0	2.5	1	1	0	1	1	1	0	AAA	domain
AAA_17	PF13207.1	gi|449066902|ref|YP_007433984.1|	-	0.021	15.6	2.1	0.074	13.8	1.5	2.0	1	1	0	1	1	1	0	AAA	domain
Gtr1_RagA	PF04670.7	gi|449066902|ref|YP_007433984.1|	-	0.023	13.8	2.0	0.37	9.8	0.1	2.2	2	0	0	2	2	2	0	Gtr1/RagA	G	protein	conserved	region
NB-ARC	PF00931.17	gi|449066902|ref|YP_007433984.1|	-	0.061	12.1	0.0	0.087	11.6	0.0	1.3	1	0	0	1	1	1	0	NB-ARC	domain
APS_kinase	PF01583.15	gi|449066902|ref|YP_007433984.1|	-	0.12	12.0	0.0	0.19	11.3	0.0	1.3	1	0	0	1	1	1	0	Adenylylsulphate	kinase
ABC_tran	PF00005.22	gi|449066902|ref|YP_007433984.1|	-	0.15	12.3	0.7	0.46	10.7	0.4	2.0	1	1	0	1	1	1	0	ABC	transporter
XhlA	PF10779.4	gi|449066902|ref|YP_007433984.1|	-	0.27	11.1	3.1	0.47	10.3	2.2	1.3	1	0	0	1	1	1	0	Haemolysin	XhlA
AAA_14	PF13173.1	gi|449066902|ref|YP_007433984.1|	-	0.63	9.9	3.5	2.4	8.0	2.4	2.2	1	1	0	1	1	1	0	AAA	domain
DUF87	PF01935.12	gi|449066902|ref|YP_007433984.1|	-	1	9.0	5.0	5.2	6.8	0.2	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF87
AAA_33	PF13671.1	gi|449066903|ref|YP_007433985.1|	-	0.044	13.6	0.0	0.069	13.0	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
MobB	PF03205.9	gi|449066903|ref|YP_007433985.1|	-	0.053	13.2	0.1	0.4	10.3	0.0	2.4	2	1	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_17	PF13207.1	gi|449066903|ref|YP_007433985.1|	-	0.064	14.0	0.2	0.16	12.7	0.2	1.8	1	1	0	1	1	1	0	AAA	domain
MMR_HSR1	PF01926.18	gi|449066903|ref|YP_007433985.1|	-	0.1	12.5	0.7	0.22	11.4	0.5	1.8	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_24	PF13479.1	gi|449066905|ref|YP_007433987.1|	-	8.1e-06	25.5	0.0	1.1e-05	25.1	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
KaiC	PF06745.8	gi|449066905|ref|YP_007433987.1|	-	7.4e-05	21.9	0.4	0.006	15.7	0.1	2.0	1	1	1	2	2	2	2	KaiC
AAA_25	PF13481.1	gi|449066905|ref|YP_007433987.1|	-	7.7e-05	22.1	0.0	0.002	17.5	0.0	2.2	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|449066905|ref|YP_007433987.1|	-	0.0066	16.6	0.1	0.0082	16.3	0.1	1.4	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF2075	PF09848.4	gi|449066905|ref|YP_007433987.1|	-	0.0076	15.2	0.1	0.009	15.0	0.0	1.2	1	1	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
RecA	PF00154.16	gi|449066905|ref|YP_007433987.1|	-	0.01	14.9	0.0	0.014	14.5	0.0	1.2	1	0	0	1	1	1	0	recA	bacterial	DNA	recombination	protein
ABC_tran	PF00005.22	gi|449066905|ref|YP_007433987.1|	-	0.014	15.7	0.1	0.02	15.1	0.1	1.3	1	1	0	1	1	1	0	ABC	transporter
AAA_22	PF13401.1	gi|449066905|ref|YP_007433987.1|	-	0.021	14.9	1.2	0.088	12.9	0.8	1.9	1	1	0	1	1	1	0	AAA	domain
Delta_lysin	PF05372.6	gi|449066905|ref|YP_007433987.1|	-	0.022	14.1	0.3	0.058	12.7	0.2	1.7	1	0	0	1	1	1	0	Delta	lysin	family
RNA_helicase	PF00910.17	gi|449066905|ref|YP_007433987.1|	-	0.022	14.9	0.1	0.042	14.0	0.1	1.6	1	1	0	1	1	1	0	RNA	helicase
AAA_17	PF13207.1	gi|449066905|ref|YP_007433987.1|	-	0.037	14.8	0.2	0.073	13.8	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_18	PF13238.1	gi|449066905|ref|YP_007433987.1|	-	0.038	14.2	0.2	0.062	13.6	0.1	1.4	1	1	0	1	1	1	0	AAA	domain
Arch_ATPase	PF01637.13	gi|449066905|ref|YP_007433987.1|	-	0.059	13.0	0.3	0.076	12.7	0.2	1.3	1	0	0	1	1	1	0	Archaeal	ATPase
AAA_16	PF13191.1	gi|449066905|ref|YP_007433987.1|	-	0.091	12.7	0.0	0.12	12.2	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
Miro	PF08477.8	gi|449066905|ref|YP_007433987.1|	-	0.14	12.6	0.4	0.51	10.8	0.3	1.9	1	1	0	1	1	1	0	Miro-like	protein
AAA_21	PF13304.1	gi|449066905|ref|YP_007433987.1|	-	0.44	10.4	6.1	1.8	8.4	4.2	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_23	PF13476.1	gi|449066905|ref|YP_007433987.1|	-	1.8	8.8	4.4	2	8.7	1.1	2.0	2	0	0	2	2	2	0	AAA	domain
DUF46	PF01864.12	gi|449066906|ref|YP_007433988.1|	-	2.7e-42	144.6	8.5	1.1e-41	142.6	5.9	1.7	1	1	0	1	1	1	1	Putative	integral	membrane	protein	DUF46
CTP_transf_1	PF01148.15	gi|449066906|ref|YP_007433988.1|	-	0.0035	17.0	6.4	0.0035	17.0	4.4	2.2	1	1	1	2	2	2	1	Cytidylyltransferase	family
DUF1275	PF06912.6	gi|449066906|ref|YP_007433988.1|	-	0.41	9.8	7.0	0.4	9.8	0.6	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1275)
DUF347	PF03988.7	gi|449066906|ref|YP_007433988.1|	-	1.3	8.9	0.1	1.3	8.9	0.0	3.4	3	1	0	3	3	3	0	Repeat	of	Unknown	Function	(DUF347)
Acyl_transf_3	PF01757.17	gi|449066907|ref|YP_007433989.1|	-	0.0095	14.7	8.0	0.011	14.5	5.6	1.1	1	0	0	1	1	1	1	Acyltransferase	family
EpsG	PF14897.1	gi|449066907|ref|YP_007433989.1|	-	0.051	12.4	12.5	0.059	12.2	8.7	1.1	1	0	0	1	1	1	0	EpsG	family
MHC2-interact	PF09307.5	gi|449066907|ref|YP_007433989.1|	-	0.14	11.9	0.1	0.22	11.2	0.1	1.3	1	0	0	1	1	1	0	CLIP,	MHC2	interacting
TRIQK	PF15168.1	gi|449066907|ref|YP_007433989.1|	-	0.77	9.7	0.1	0.77	9.7	0.1	2.1	2	1	1	3	3	3	0	Triple	QxxK/R	motif-containing	protein	family
MARVEL	PF01284.18	gi|449066907|ref|YP_007433989.1|	-	1	9.1	11.6	1.2	8.9	8.0	1.1	1	0	0	1	1	1	0	Membrane-associating	domain
Cytochrom_B_N	PF00033.14	gi|449066907|ref|YP_007433989.1|	-	1.5	8.1	9.5	0.12	11.6	0.9	2.2	1	1	1	2	2	2	0	Cytochrome	b(N-terminal)/b6/petB
DUF3112	PF11309.3	gi|449066907|ref|YP_007433989.1|	-	2	8.2	12.5	1.2	8.8	4.4	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3112)
DUF843	PF05814.6	gi|449066907|ref|YP_007433989.1|	-	2.8	7.8	8.9	0.99	9.2	1.6	2.4	2	0	0	2	2	2	0	Baculovirus	protein	of	unknown	function	(DUF843)
SdpI	PF13630.1	gi|449066907|ref|YP_007433989.1|	-	8.4	6.1	14.8	1.8	8.2	4.0	2.2	2	0	0	2	2	2	0	SdpI/YhfL	protein	family
DUF2306	PF10067.4	gi|449066907|ref|YP_007433989.1|	-	8.5	6.5	7.7	51	4.0	5.4	2.2	1	1	1	2	2	2	0	Predicted	membrane	protein	(DUF2306)
DUF3990	PF13151.1	gi|449066908|ref|YP_007433990.1|	-	0.052	12.9	0.0	0.065	12.6	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3990)
MlrC_C	PF07171.7	gi|449066908|ref|YP_007433990.1|	-	0.093	12.2	0.0	0.097	12.2	0.0	1.0	1	0	0	1	1	1	0	MlrC	C-terminus
MCM	PF00493.18	gi|449066909|ref|YP_007433991.1|	-	1.9e-136	454.2	0.4	2.6e-136	453.7	0.3	1.2	1	0	0	1	1	1	1	MCM2/3/5	family
MCM_N	PF14551.1	gi|449066909|ref|YP_007433991.1|	-	2.8e-23	82.6	2.5	3.3e-23	82.4	0.5	2.1	2	0	0	2	2	2	1	MCM	N-terminal	domain
AAA_5	PF07728.9	gi|449066909|ref|YP_007433991.1|	-	4.6e-08	32.8	0.0	1.1e-07	31.6	0.0	1.7	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
Mg_chelatase	PF01078.16	gi|449066909|ref|YP_007433991.1|	-	9.3e-07	28.2	0.1	9.8e-05	21.6	0.1	2.4	1	1	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
Sigma54_activat	PF00158.21	gi|449066909|ref|YP_007433991.1|	-	2.3e-05	23.9	0.2	0.00037	20.0	0.1	2.3	1	1	0	1	1	1	1	Sigma-54	interaction	domain
AAA_3	PF07726.6	gi|449066909|ref|YP_007433991.1|	-	3.3e-05	23.5	0.0	6.9e-05	22.4	0.0	1.5	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF4325	PF14213.1	gi|449066909|ref|YP_007433991.1|	-	0.0026	17.3	0.4	0.013	15.1	0.0	2.4	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF4325)
DUF3987	PF13148.1	gi|449066909|ref|YP_007433991.1|	-	0.02	13.5	0.1	0.46	8.9	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3987)
ANT	PF03374.9	gi|449066909|ref|YP_007433991.1|	-	0.028	14.4	0.0	0.066	13.2	0.0	1.6	1	0	0	1	1	1	0	Phage	antirepressor	protein	KilAC	domain
HEPN	PF05168.9	gi|449066909|ref|YP_007433991.1|	-	0.21	11.4	3.2	1.8	8.5	0.1	2.9	3	0	0	3	3	3	0	HEPN	domain
Sld5	PF05916.6	gi|449066910|ref|YP_007433992.1|	-	5.7e-10	39.4	0.7	7.6e-10	39.0	0.5	1.2	1	0	0	1	1	1	1	GINS	complex	protein
THUMP	PF02926.12	gi|449066911|ref|YP_007433993.1|	-	3.2e-10	40.0	0.9	4.1e-10	39.7	0.6	1.2	1	0	0	1	1	1	1	THUMP	domain
Cdc6_C	PF09079.6	gi|449066912|ref|YP_007433994.1|	-	7.2e-21	73.7	0.0	2.5e-20	71.9	0.0	2.0	1	0	0	1	1	1	1	CDC6,	C	terminal
AAA_22	PF13401.1	gi|449066912|ref|YP_007433994.1|	-	3.6e-14	53.0	0.5	1.6e-13	50.9	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|449066912|ref|YP_007433994.1|	-	0.00013	21.9	0.8	0.0041	17.1	0.2	2.7	2	1	0	2	2	2	1	AAA	ATPase	domain
AAA_18	PF13238.1	gi|449066912|ref|YP_007433994.1|	-	0.0099	16.1	0.0	0.066	13.5	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
NACHT	PF05729.7	gi|449066912|ref|YP_007433994.1|	-	0.048	13.3	0.0	0.095	12.3	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
AIG1	PF04548.11	gi|449066912|ref|YP_007433994.1|	-	0.093	11.8	0.0	0.19	10.8	0.0	1.5	1	0	0	1	1	1	0	AIG1	family
AAA_17	PF13207.1	gi|449066912|ref|YP_007433994.1|	-	0.19	12.5	0.8	0.54	11.0	0.5	2.1	1	1	0	1	1	1	0	AAA	domain
TrmB	PF01978.14	gi|449066913|ref|YP_007433995.1|	-	7.1e-05	22.4	0.3	8.6e-05	22.1	0.2	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
Rrf2	PF02082.15	gi|449066913|ref|YP_007433995.1|	-	0.0012	18.8	0.1	0.0016	18.5	0.0	1.2	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_45	PF14947.1	gi|449066913|ref|YP_007433995.1|	-	0.0014	18.4	0.2	0.0018	18.0	0.2	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_Crp_2	PF13545.1	gi|449066913|ref|YP_007433995.1|	-	0.0031	17.2	0.1	0.0037	17.0	0.1	1.3	1	1	0	1	1	1	1	Crp-like	helix-turn-helix	domain
Ftsk_gamma	PF09397.5	gi|449066913|ref|YP_007433995.1|	-	0.04	13.6	0.1	0.052	13.2	0.1	1.2	1	0	0	1	1	1	0	Ftsk	gamma	domain
DUF1975	PF09318.5	gi|449066913|ref|YP_007433995.1|	-	0.054	13.0	0.2	0.054	13.0	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1975)
HTH_24	PF13412.1	gi|449066913|ref|YP_007433995.1|	-	0.055	12.8	0.6	0.09	12.1	0.4	1.4	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.17	gi|449066913|ref|YP_007433995.1|	-	0.059	13.0	0.1	0.085	12.5	0.0	1.3	1	0	0	1	1	1	0	MarR	family
DUF2582	PF10771.4	gi|449066913|ref|YP_007433995.1|	-	0.069	13.0	0.2	0.082	12.7	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2582)
Phage_rep_org_N	PF09681.5	gi|449066913|ref|YP_007433995.1|	-	0.074	12.6	0.1	0.097	12.2	0.1	1.2	1	1	0	1	1	1	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
GntR	PF00392.16	gi|449066913|ref|YP_007433995.1|	-	0.11	11.9	0.0	0.13	11.6	0.0	1.2	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
MoaC	PF01967.16	gi|449066914|ref|YP_007433996.1|	-	2.8e-50	169.5	3.2	3.1e-50	169.3	2.2	1.0	1	0	0	1	1	1	1	MoaC	family
AAA	PF00004.24	gi|449066915|ref|YP_007433997.1|	-	3.4e-18	66.1	0.4	1.3e-16	60.9	0.0	3.0	2	2	1	4	4	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.7	gi|449066915|ref|YP_007433997.1|	-	4e-11	42.4	0.0	1.1e-10	40.9	0.0	1.7	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
Rad17	PF03215.10	gi|449066915|ref|YP_007433997.1|	-	3.2e-09	36.0	0.6	2.8e-05	22.9	0.0	2.9	3	0	0	3	3	3	2	Rad17	cell	cycle	checkpoint	protein
AAA_14	PF13173.1	gi|449066915|ref|YP_007433997.1|	-	8e-09	35.4	0.0	1.2e-07	31.6	0.0	2.4	1	1	1	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|449066915|ref|YP_007433997.1|	-	2.7e-08	34.0	0.2	2.8e-06	27.4	0.0	3.6	2	1	0	2	2	2	1	AAA	domain
AAA_5	PF07728.9	gi|449066915|ref|YP_007433997.1|	-	3.8e-08	33.1	0.0	1.5e-07	31.1	0.0	2.0	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_17	PF13207.1	gi|449066915|ref|YP_007433997.1|	-	1.4e-07	32.3	2.3	2.4e-07	31.5	0.3	2.6	2	1	0	2	2	1	1	AAA	domain
DUF815	PF05673.8	gi|449066915|ref|YP_007433997.1|	-	5e-07	28.8	0.0	2e-06	26.9	0.0	2.0	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF815)
AAA_16	PF13191.1	gi|449066915|ref|YP_007433997.1|	-	8.5e-07	29.1	0.0	3.8e-06	27.0	0.0	2.2	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_18	PF13238.1	gi|449066915|ref|YP_007433997.1|	-	6.8e-05	23.1	0.0	6.8e-05	23.1	0.0	2.9	4	0	0	4	4	2	1	AAA	domain
IstB_IS21	PF01695.12	gi|449066915|ref|YP_007433997.1|	-	7.9e-05	22.1	0.1	0.00034	20.0	0.0	2.2	2	1	0	2	2	1	1	IstB-like	ATP	binding	protein
TIP49	PF06068.8	gi|449066915|ref|YP_007433997.1|	-	8.6e-05	21.4	0.0	0.056	12.1	0.0	2.3	2	0	0	2	2	2	2	TIP49	C-terminus
AAA_2	PF07724.9	gi|449066915|ref|YP_007433997.1|	-	0.00014	21.8	0.0	0.0011	18.9	0.0	2.3	2	0	0	2	2	2	1	AAA	domain	(Cdc48	subfamily)
Arch_ATPase	PF01637.13	gi|449066915|ref|YP_007433997.1|	-	0.00023	20.9	4.1	0.00051	19.8	0.0	3.2	3	1	0	3	3	3	1	Archaeal	ATPase
AAA_24	PF13479.1	gi|449066915|ref|YP_007433997.1|	-	0.00025	20.6	0.0	0.00095	18.8	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_33	PF13671.1	gi|449066915|ref|YP_007433997.1|	-	0.00032	20.6	0.0	0.0014	18.5	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
RNA_helicase	PF00910.17	gi|449066915|ref|YP_007433997.1|	-	0.00058	19.9	0.0	0.0023	18.0	0.0	2.1	2	0	0	2	2	1	1	RNA	helicase
NACHT	PF05729.7	gi|449066915|ref|YP_007433997.1|	-	0.00059	19.5	0.2	0.027	14.1	0.0	3.2	3	1	0	4	4	4	1	NACHT	domain
AAA_28	PF13521.1	gi|449066915|ref|YP_007433997.1|	-	0.0008	19.3	0.0	0.0038	17.2	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
NB-ARC	PF00931.17	gi|449066915|ref|YP_007433997.1|	-	0.00096	18.0	0.0	0.0041	16.0	0.0	1.9	2	0	0	2	2	2	1	NB-ARC	domain
AAA_25	PF13481.1	gi|449066915|ref|YP_007433997.1|	-	0.0011	18.3	0.0	0.0062	15.9	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
ABC_tran	PF00005.22	gi|449066915|ref|YP_007433997.1|	-	0.0015	18.8	0.1	0.029	14.6	0.0	2.9	3	0	0	3	3	3	1	ABC	transporter
DNA_pol3_delta	PF06144.8	gi|449066915|ref|YP_007433997.1|	-	0.0035	16.8	0.8	0.087	12.3	0.0	3.0	3	0	0	3	3	3	1	DNA	polymerase	III,	delta	subunit
DUF258	PF03193.11	gi|449066915|ref|YP_007433997.1|	-	0.0036	16.5	0.0	0.0083	15.3	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AFG1_ATPase	PF03969.11	gi|449066915|ref|YP_007433997.1|	-	0.0044	15.8	0.0	2.3	6.9	0.0	2.8	2	1	1	3	3	3	1	AFG1-like	ATPase
Zeta_toxin	PF06414.7	gi|449066915|ref|YP_007433997.1|	-	0.0045	16.1	0.0	0.0098	15.0	0.0	1.5	1	0	0	1	1	1	1	Zeta	toxin
KaiC	PF06745.8	gi|449066915|ref|YP_007433997.1|	-	0.0046	16.0	0.1	0.3	10.1	0.0	3.1	3	1	1	4	4	4	1	KaiC
Parvo_NS1	PF01057.12	gi|449066915|ref|YP_007433997.1|	-	0.0061	15.4	0.0	0.07	11.9	0.0	2.2	2	0	0	2	2	2	1	Parvovirus	non-structural	protein	NS1
AAA_19	PF13245.1	gi|449066915|ref|YP_007433997.1|	-	0.0087	15.7	0.0	0.02	14.6	0.0	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
NTPase_1	PF03266.10	gi|449066915|ref|YP_007433997.1|	-	0.0094	15.6	0.0	0.21	11.2	0.0	2.7	2	1	1	3	3	3	1	NTPase
Mg_chelatase	PF01078.16	gi|449066915|ref|YP_007433997.1|	-	0.015	14.4	0.0	0.025	13.7	0.0	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
Sigma54_activ_2	PF14532.1	gi|449066915|ref|YP_007433997.1|	-	0.017	15.1	0.0	0.037	14.0	0.0	1.6	1	0	0	1	1	1	0	Sigma-54	interaction	domain
AAA_23	PF13476.1	gi|449066915|ref|YP_007433997.1|	-	0.021	15.1	2.7	0.3	11.3	0.0	2.9	2	1	1	3	3	2	0	AAA	domain
AAA_29	PF13555.1	gi|449066915|ref|YP_007433997.1|	-	0.027	14.0	0.0	0.054	13.0	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
DNA_pol3_delta2	PF13177.1	gi|449066915|ref|YP_007433997.1|	-	0.043	13.4	0.0	0.33	10.6	0.0	2.2	2	1	0	2	2	2	0	DNA	polymerase	III,	delta	subunit
Sigma54_activat	PF00158.21	gi|449066915|ref|YP_007433997.1|	-	0.045	13.2	0.0	0.13	11.7	0.0	1.8	1	1	0	1	1	1	0	Sigma-54	interaction	domain
AAA_3	PF07726.6	gi|449066915|ref|YP_007433997.1|	-	0.048	13.2	0.0	0.16	11.5	0.0	1.9	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
MMR_HSR1	PF01926.18	gi|449066915|ref|YP_007433997.1|	-	0.066	13.1	0.0	0.29	11.0	0.0	2.2	2	1	0	2	2	2	0	50S	ribosome-binding	GTPase
AAA_10	PF12846.2	gi|449066915|ref|YP_007433997.1|	-	0.1	12.0	0.0	2	7.7	0.0	2.7	3	0	0	3	3	3	0	AAA-like	domain
ArgK	PF03308.11	gi|449066915|ref|YP_007433997.1|	-	0.13	11.0	0.0	0.24	10.1	0.0	1.4	1	0	0	1	1	1	0	ArgK	protein
AAA_21	PF13304.1	gi|449066915|ref|YP_007433997.1|	-	0.36	10.7	3.7	0.61	9.9	0.0	3.0	4	1	1	5	5	5	0	AAA	domain
Rep_fac_C	PF08542.6	gi|449066916|ref|YP_007433998.1|	-	2.4e-24	85.1	0.1	7.4e-24	83.5	0.1	1.9	1	0	0	1	1	1	1	Replication	factor	C	C-terminal	domain
AAA	PF00004.24	gi|449066916|ref|YP_007433998.1|	-	1.7e-16	60.6	0.0	3.9e-16	59.4	0.0	1.7	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DNA_pol3_delta2	PF13177.1	gi|449066916|ref|YP_007433998.1|	-	2.6e-14	53.1	0.7	3.9e-12	46.1	0.1	2.5	2	1	0	2	2	1	1	DNA	polymerase	III,	delta	subunit
Rad17	PF03215.10	gi|449066916|ref|YP_007433998.1|	-	2.9e-09	36.1	0.1	7e-06	25.0	0.0	2.2	1	1	1	2	2	2	2	Rad17	cell	cycle	checkpoint	protein
RuvB_N	PF05496.7	gi|449066916|ref|YP_007433998.1|	-	1.5e-08	34.0	0.1	1.3e-07	30.9	0.0	2.1	2	1	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_14	PF13173.1	gi|449066916|ref|YP_007433998.1|	-	7.5e-08	32.3	0.3	1.7e-06	27.9	0.0	2.4	1	1	1	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|449066916|ref|YP_007433998.1|	-	1.5e-07	31.6	0.2	6.2e-05	23.1	0.0	3.1	2	1	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|449066916|ref|YP_007433998.1|	-	1e-06	28.8	0.0	0.00058	19.9	0.0	2.4	1	1	1	2	2	2	1	AAA	ATPase	domain
AAA_18	PF13238.1	gi|449066916|ref|YP_007433998.1|	-	7.3e-06	26.3	0.3	9.8e-05	22.6	0.0	2.6	2	1	1	3	3	2	1	AAA	domain
AAA_3	PF07726.6	gi|449066916|ref|YP_007433998.1|	-	1.3e-05	24.8	0.0	2.2e-05	24.0	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
TIP49	PF06068.8	gi|449066916|ref|YP_007433998.1|	-	1.4e-05	24.0	0.0	0.0006	18.6	0.0	2.3	1	1	0	1	1	1	1	TIP49	C-terminus
IstB_IS21	PF01695.12	gi|449066916|ref|YP_007433998.1|	-	1.5e-05	24.5	0.0	2.5e-05	23.7	0.0	1.3	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_19	PF13245.1	gi|449066916|ref|YP_007433998.1|	-	2.6e-05	23.8	0.0	6.3e-05	22.6	0.0	1.7	1	0	0	1	1	1	1	Part	of	AAA	domain
DNA_pol3_delta	PF06144.8	gi|449066916|ref|YP_007433998.1|	-	9e-05	22.0	0.7	0.00023	20.6	0.1	1.9	2	0	0	2	2	1	1	DNA	polymerase	III,	delta	subunit
FtsK_SpoIIIE	PF01580.13	gi|449066916|ref|YP_007433998.1|	-	0.00017	21.1	0.0	0.0016	17.9	0.0	2.3	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
ResIII	PF04851.10	gi|449066916|ref|YP_007433998.1|	-	0.00022	21.0	0.0	0.0025	17.6	0.0	2.2	1	1	1	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Sigma54_activ_2	PF14532.1	gi|449066916|ref|YP_007433998.1|	-	0.00041	20.4	0.0	0.0022	18.0	0.0	2.2	1	1	0	1	1	1	1	Sigma-54	interaction	domain
AAA_17	PF13207.1	gi|449066916|ref|YP_007433998.1|	-	0.00042	21.1	0.0	0.0011	19.7	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_11	PF13086.1	gi|449066916|ref|YP_007433998.1|	-	0.00054	19.6	0.0	0.00084	18.9	0.0	1.3	1	1	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|449066916|ref|YP_007433998.1|	-	0.00076	19.2	0.1	0.0014	18.4	0.1	1.5	1	1	0	1	1	1	1	Archaeal	ATPase
AAA_10	PF12846.2	gi|449066916|ref|YP_007433998.1|	-	0.001	18.5	0.1	0.05	13.0	0.0	2.4	1	1	1	2	2	2	1	AAA-like	domain
AAA_25	PF13481.1	gi|449066916|ref|YP_007433998.1|	-	0.0011	18.3	0.5	0.0075	15.6	0.1	2.5	2	1	0	2	2	2	1	AAA	domain
Mg_chelatase	PF01078.16	gi|449066916|ref|YP_007433998.1|	-	0.0016	17.6	0.0	0.09	11.9	0.0	2.4	2	1	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_5	PF07728.9	gi|449066916|ref|YP_007433998.1|	-	0.0017	18.1	0.1	0.0089	15.7	0.0	2.3	2	1	0	2	2	1	1	AAA	domain	(dynein-related	subfamily)
SNF2_N	PF00176.18	gi|449066916|ref|YP_007433998.1|	-	0.0018	17.1	0.0	0.41	9.3	0.0	2.1	1	1	1	2	2	2	1	SNF2	family	N-terminal	domain
DUF2075	PF09848.4	gi|449066916|ref|YP_007433998.1|	-	0.0021	17.1	0.1	0.011	14.7	0.1	1.9	1	1	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_30	PF13604.1	gi|449066916|ref|YP_007433998.1|	-	0.0023	17.5	0.0	0.014	15.0	0.0	2.3	2	2	0	2	2	2	1	AAA	domain
PhoH	PF02562.11	gi|449066916|ref|YP_007433998.1|	-	0.003	16.8	0.0	0.29	10.3	0.0	2.4	2	0	0	2	2	2	1	PhoH-like	protein
KTI12	PF08433.5	gi|449066916|ref|YP_007433998.1|	-	0.0038	16.4	0.0	0.012	14.7	0.0	1.9	2	0	0	2	2	2	1	Chromatin	associated	protein	KTI12
AAA_33	PF13671.1	gi|449066916|ref|YP_007433998.1|	-	0.0049	16.7	0.1	0.014	15.2	0.1	1.9	1	1	0	1	1	1	1	AAA	domain
DUF815	PF05673.8	gi|449066916|ref|YP_007433998.1|	-	0.0055	15.6	0.0	0.0094	14.9	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
T2SE	PF00437.15	gi|449066916|ref|YP_007433998.1|	-	0.0068	15.3	0.0	0.014	14.3	0.0	1.5	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
DEAD	PF00270.24	gi|449066916|ref|YP_007433998.1|	-	0.0074	15.7	0.4	3.3	7.1	0.0	2.7	2	2	1	3	3	3	0	DEAD/DEAH	box	helicase
Sigma54_activat	PF00158.21	gi|449066916|ref|YP_007433998.1|	-	0.013	15.0	0.0	0.4	10.1	0.0	2.2	2	0	0	2	2	2	0	Sigma-54	interaction	domain
Phage_T4_Ndd	PF06591.6	gi|449066916|ref|YP_007433998.1|	-	0.014	14.9	0.1	0.044	13.3	0.0	1.8	1	1	1	2	2	2	0	T4-like	phage	nuclear	disruption	protein	(Ndd)
Viral_helicase1	PF01443.13	gi|449066916|ref|YP_007433998.1|	-	0.017	14.6	0.0	0.029	13.8	0.0	1.4	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
Zeta_toxin	PF06414.7	gi|449066916|ref|YP_007433998.1|	-	0.018	14.1	0.0	0.041	12.9	0.0	1.7	1	0	0	1	1	1	0	Zeta	toxin
AAA_28	PF13521.1	gi|449066916|ref|YP_007433998.1|	-	0.023	14.6	0.0	0.052	13.5	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
MobB	PF03205.9	gi|449066916|ref|YP_007433998.1|	-	0.025	14.2	0.0	0.15	11.7	0.0	2.2	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_24	PF13479.1	gi|449066916|ref|YP_007433998.1|	-	0.029	13.9	0.1	0.085	12.4	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.17	gi|449066916|ref|YP_007433998.1|	-	0.033	14.3	0.0	0.15	12.2	0.0	2.2	2	1	0	2	2	1	0	RNA	helicase
SseB_C	PF14581.1	gi|449066916|ref|YP_007433998.1|	-	0.036	13.9	0.1	0.17	11.7	0.0	2.2	2	0	0	2	2	1	0	SseB	protein	C-terminal	domain
DNA_pol3_gamma3	PF12169.3	gi|449066916|ref|YP_007433998.1|	-	0.053	13.2	0.6	2.1	8.0	0.0	3.2	4	0	0	4	4	3	0	DNA	polymerase	III	subunits	gamma	and	tau	domain	III
NTPase_1	PF03266.10	gi|449066916|ref|YP_007433998.1|	-	0.07	12.8	0.8	0.71	9.5	0.0	2.6	2	1	1	3	3	2	0	NTPase
AAA_29	PF13555.1	gi|449066916|ref|YP_007433998.1|	-	0.086	12.3	0.0	0.2	11.2	0.0	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
TrwB_AAD_bind	PF10412.4	gi|449066916|ref|YP_007433998.1|	-	0.11	11.0	0.0	0.19	10.3	0.0	1.3	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
NB-ARC	PF00931.17	gi|449066916|ref|YP_007433998.1|	-	0.11	11.2	0.0	0.17	10.7	0.0	1.3	1	0	0	1	1	1	0	NB-ARC	domain
PBP	PF01161.15	gi|449066917|ref|YP_007433999.1|	-	4e-40	137.0	0.0	4.6e-40	136.8	0.0	1.0	1	0	0	1	1	1	1	Phosphatidylethanolamine-binding	protein
Proteasome	PF00227.21	gi|449066918|ref|YP_007434000.1|	-	1.1e-51	174.8	0.3	1.3e-51	174.6	0.2	1.0	1	0	0	1	1	1	1	Proteasome	subunit
Amidase	PF01425.16	gi|449066919|ref|YP_007434001.1|	-	1.3e-93	314.2	0.0	1.8e-93	313.7	0.0	1.1	1	0	0	1	1	1	1	Amidase
ADH_N	PF08240.7	gi|449066920|ref|YP_007434002.1|	-	4.3e-28	97.2	0.1	8.8e-28	96.2	0.1	1.5	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|449066920|ref|YP_007434002.1|	-	2.8e-19	68.9	0.1	4e-19	68.4	0.1	1.3	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|449066920|ref|YP_007434002.1|	-	4e-08	34.2	0.0	7.7e-08	33.2	0.0	1.5	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
Eno-Rase_NADH_b	PF12242.3	gi|449066920|ref|YP_007434002.1|	-	0.00049	19.8	0.9	0.0012	18.6	0.6	1.6	1	0	0	1	1	1	1	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
CPSase_L_chain	PF00289.17	gi|449066920|ref|YP_007434002.1|	-	0.01	15.9	0.0	0.028	14.5	0.0	1.7	2	0	0	2	2	2	0	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
E1-N	PF14463.1	gi|449066920|ref|YP_007434002.1|	-	0.018	14.6	0.1	0.039	13.5	0.0	1.5	1	0	0	1	1	1	0	E1	N-terminal	domain
AlaDh_PNT_C	PF01262.16	gi|449066920|ref|YP_007434002.1|	-	0.038	13.5	0.4	0.078	12.5	0.2	1.5	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
Rep_fac_C	PF08542.6	gi|449066922|ref|YP_007434004.1|	-	0.056	13.4	0.2	6	6.9	0.0	2.5	2	0	0	2	2	2	0	Replication	factor	C	C-terminal	domain
Bacillus_HBL	PF05791.6	gi|449066922|ref|YP_007434004.1|	-	0.071	12.4	0.1	0.1	11.9	0.0	1.3	1	0	0	1	1	1	0	Bacillus	haemolytic	enterotoxin	(HBL)
DUF2730	PF10805.3	gi|449066922|ref|YP_007434004.1|	-	0.089	12.5	0.0	0.15	11.8	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2730)
TP_methylase	PF00590.15	gi|449066923|ref|YP_007434005.1|	-	2.2e-46	158.2	0.2	2.6e-46	157.9	0.2	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
YHS	PF04945.8	gi|449066924|ref|YP_007434006.1|	-	2.3e-20	72.1	2.1	2.5e-20	72.0	1.5	1.0	1	0	0	1	1	1	1	YHS	domain
Arc_trans_TRASH	PF08394.5	gi|449066924|ref|YP_007434006.1|	-	9.2e-06	25.7	2.0	1.2e-05	25.3	1.4	1.2	1	0	0	1	1	1	1	Archaeal	TRASH	domain
zf-FCS	PF06467.9	gi|449066924|ref|YP_007434006.1|	-	0.00012	21.6	0.9	0.00015	21.3	0.7	1.2	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
DUF2116	PF09889.4	gi|449066924|ref|YP_007434006.1|	-	0.047	13.5	0.2	0.2	11.4	0.1	1.8	2	0	0	2	2	2	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
RPAP2_Rtr1	PF04181.8	gi|449066924|ref|YP_007434006.1|	-	0.11	12.6	0.2	0.13	12.3	0.2	1.2	1	0	0	1	1	1	0	Rtr1/RPAP2	family
FAD_binding_5	PF00941.16	gi|449066925|ref|YP_007434007.1|	-	7.3e-49	165.4	0.0	1e-48	165.0	0.0	1.2	1	0	0	1	1	1	1	FAD	binding	domain	in	molybdopterin	dehydrogenase
CO_deh_flav_C	PF03450.12	gi|449066925|ref|YP_007434007.1|	-	1.2e-28	99.0	0.5	1.9e-28	98.4	0.3	1.3	1	0	0	1	1	1	1	CO	dehydrogenase	flavoprotein	C-terminal	domain
Fer2_2	PF01799.15	gi|449066926|ref|YP_007434008.1|	-	3e-36	123.1	0.5	1.4e-35	121.0	0.0	2.0	2	0	0	2	2	2	1	[2Fe-2S]	binding	domain
Fer2	PF00111.22	gi|449066926|ref|YP_007434008.1|	-	3.1e-07	30.0	1.0	3.1e-07	30.0	0.7	2.0	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer2_3	PF13085.1	gi|449066926|ref|YP_007434008.1|	-	0.00036	20.3	0.1	0.00069	19.4	0.1	1.5	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer2_4	PF13510.1	gi|449066926|ref|YP_007434008.1|	-	0.12	12.2	2.1	1	9.2	1.5	2.3	1	1	0	1	1	1	0	2Fe-2S	iron-sulfur	cluster	binding	domain
NTP_transf_3	PF12804.2	gi|449066927|ref|YP_007434009.1|	-	7.5e-35	120.3	0.0	9.7e-35	120.0	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.14	gi|449066927|ref|YP_007434009.1|	-	2.1e-07	30.6	0.0	3.5e-07	29.9	0.0	1.3	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
CofC	PF01983.11	gi|449066927|ref|YP_007434009.1|	-	0.00063	18.7	0.1	0.00087	18.3	0.0	1.3	1	1	0	1	1	1	1	Guanylyl	transferase	CofC	like
NTP_transferase	PF00483.18	gi|449066927|ref|YP_007434009.1|	-	0.16	11.2	0.0	0.33	10.1	0.0	1.5	1	1	0	1	1	1	0	Nucleotidyl	transferase
COXG	PF06240.8	gi|449066928|ref|YP_007434010.1|	-	1.3e-39	135.0	0.1	1.4e-39	134.9	0.0	1.0	1	0	0	1	1	1	1	Carbon	monoxide	dehydrogenase	subunit	G	(CoxG)
Polyketide_cyc	PF03364.15	gi|449066928|ref|YP_007434010.1|	-	7.1e-05	22.8	0.0	0.00011	22.1	0.0	1.3	1	1	0	1	1	1	1	Polyketide	cyclase	/	dehydrase	and	lipid	transport
Polyketide_cyc2	PF10604.4	gi|449066928|ref|YP_007434010.1|	-	0.096	12.8	0.0	0.1	12.7	0.0	1.2	1	1	0	1	1	1	0	Polyketide	cyclase	/	dehydrase	and	lipid	transport
GTP_EFTU	PF00009.22	gi|449066929|ref|YP_007434011.1|	-	6.2e-25	87.7	0.1	1.1e-24	86.9	0.0	1.3	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D3	PF03143.12	gi|449066929|ref|YP_007434011.1|	-	6.3e-16	58.3	0.0	1.4e-15	57.2	0.0	1.6	1	0	0	1	1	1	1	Elongation	factor	Tu	C-terminal	domain
PduV-EutP	PF10662.4	gi|449066929|ref|YP_007434011.1|	-	1.3e-05	24.7	0.6	0.79	9.1	0.0	3.4	2	1	1	3	3	3	3	Ethanolamine	utilisation	-	propanediol	utilisation
MMR_HSR1	PF01926.18	gi|449066929|ref|YP_007434011.1|	-	0.00011	22.1	1.0	0.00034	20.5	0.7	2.0	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
GTP_EFTU_D2	PF03144.20	gi|449066929|ref|YP_007434011.1|	-	0.001	19.1	1.3	0.0042	17.1	0.9	2.1	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
AAA_4	PF04326.9	gi|449066929|ref|YP_007434011.1|	-	0.14	12.3	5.4	0.23	11.5	0.2	3.2	3	1	1	4	4	4	0	Divergent	AAA	domain
zf-ZPR1	PF03367.8	gi|449066930|ref|YP_007434012.1|	-	8.1e-24	83.6	0.1	4.8e-22	77.8	0.1	2.0	1	1	0	1	1	1	1	ZPR1	zinc-finger	domain
UPF0179	PF03684.8	gi|449066930|ref|YP_007434012.1|	-	0.095	12.2	0.0	0.14	11.7	0.0	1.2	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0179)
HSP20	PF00011.16	gi|449066931|ref|YP_007434013.1|	-	8.1e-11	41.6	1.7	2.5e-09	36.9	1.2	2.2	1	1	0	1	1	1	1	Hsp20/alpha	crystallin	family
CS	PF04969.11	gi|449066931|ref|YP_007434013.1|	-	0.0002	21.8	0.4	0.00034	21.1	0.3	1.3	1	0	0	1	1	1	1	CS	domain
GvpH	PF05455.6	gi|449066931|ref|YP_007434013.1|	-	0.02	14.5	0.0	0.026	14.1	0.0	1.3	1	0	0	1	1	1	0	GvpH
Glyoxalase_4	PF13669.1	gi|449066932|ref|YP_007434014.1|	-	3.3e-21	75.3	0.0	4e-21	75.0	0.0	1.1	1	0	0	1	1	1	1	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase_3	PF13468.1	gi|449066932|ref|YP_007434014.1|	-	7.7e-10	38.9	0.0	9.4e-10	38.6	0.0	1.2	1	0	0	1	1	1	1	Glyoxalase-like	domain
Glyoxalase	PF00903.20	gi|449066932|ref|YP_007434014.1|	-	1.8e-09	37.6	0.0	3.9e-09	36.5	0.0	1.6	1	1	0	1	1	1	1	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase_2	PF12681.2	gi|449066932|ref|YP_007434014.1|	-	3e-07	31.0	0.0	3.4e-07	30.8	0.0	1.1	1	0	0	1	1	1	1	Glyoxalase-like	domain
Glyoxalase_5	PF14696.1	gi|449066932|ref|YP_007434014.1|	-	0.059	13.3	0.0	0.095	12.6	0.0	1.4	1	1	0	1	1	1	0	Hydroxyphenylpyruvate	dioxygenase,	HPPD,	N-terminal
MM_CoA_mutase	PF01642.17	gi|449066933|ref|YP_007434015.1|	-	2.5e-187	623.1	0.0	2.9e-187	622.9	0.0	1.0	1	0	0	1	1	1	1	Methylmalonyl-CoA	mutase
RE_AccI	PF09545.5	gi|449066933|ref|YP_007434015.1|	-	0.088	11.3	0.0	0.13	10.8	0.0	1.4	1	0	0	1	1	1	0	AccI	restriction	endonuclease
Pribosyltran	PF00156.22	gi|449066934|ref|YP_007434016.1|	-	9.8e-20	70.5	0.2	1.3e-19	70.1	0.2	1.2	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
Phosphodiest	PF01663.17	gi|449066935|ref|YP_007434017.1|	-	2.8e-18	66.4	5.6	5e-17	62.2	3.9	2.2	1	1	0	1	1	1	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
PglZ	PF08665.7	gi|449066935|ref|YP_007434017.1|	-	1.6e-06	27.8	1.6	5e-06	26.3	0.1	2.2	2	0	0	2	2	2	1	PglZ	domain
Metalloenzyme	PF01676.13	gi|449066935|ref|YP_007434017.1|	-	5.9e-06	25.8	0.9	1.3e-05	24.7	0.3	1.9	2	0	0	2	2	2	1	Metalloenzyme	superfamily
DAO	PF01266.19	gi|449066937|ref|YP_007434019.1|	-	5.9e-18	64.8	0.0	5.3e-09	35.4	0.0	2.4	2	1	0	2	2	2	2	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|449066937|ref|YP_007434019.1|	-	5.7e-13	48.6	0.3	1.8e-12	47.1	0.1	1.9	2	0	0	2	2	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox	PF00070.22	gi|449066937|ref|YP_007434019.1|	-	1.4e-09	38.1	1.5	4.3e-05	23.8	0.2	3.0	3	0	0	3	3	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.12	gi|449066937|ref|YP_007434019.1|	-	2.2e-09	36.7	1.3	1.7e-07	30.5	0.2	2.3	2	0	0	2	2	2	1	Thi4	family
Amino_oxidase	PF01593.19	gi|449066937|ref|YP_007434019.1|	-	3.9e-09	36.1	0.2	0.0022	17.1	0.0	3.2	3	1	0	3	3	3	2	Flavin	containing	amine	oxidoreductase
FAD_binding_2	PF00890.19	gi|449066937|ref|YP_007434019.1|	-	5.8e-08	31.9	2.0	0.00047	19.1	0.5	2.6	3	0	0	3	3	3	2	FAD	binding	domain
Pyr_redox_2	PF07992.9	gi|449066937|ref|YP_007434019.1|	-	8.2e-07	29.0	0.0	3.7e-06	26.9	0.0	2.0	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|449066937|ref|YP_007434019.1|	-	5.6e-06	25.0	0.5	0.0004	18.9	0.1	2.2	2	0	0	2	2	2	1	HI0933-like	protein
FAD_oxidored	PF12831.2	gi|449066937|ref|YP_007434019.1|	-	2e-05	23.8	0.1	8.4e-05	21.8	0.0	1.9	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
FAD_binding_3	PF01494.14	gi|449066937|ref|YP_007434019.1|	-	2.9e-05	23.2	0.1	5.4e-05	22.4	0.1	1.4	1	0	0	1	1	1	1	FAD	binding	domain
GIDA	PF01134.17	gi|449066937|ref|YP_007434019.1|	-	7.1e-05	21.8	2.2	0.0029	16.5	0.4	2.5	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
GDI	PF00996.13	gi|449066937|ref|YP_007434019.1|	-	0.0015	16.9	0.2	0.36	9.0	0.0	2.2	2	0	0	2	2	2	2	GDP	dissociation	inhibitor
Trp_halogenase	PF04820.9	gi|449066937|ref|YP_007434019.1|	-	0.0037	15.9	1.1	0.039	12.5	0.2	2.2	2	0	0	2	2	2	1	Tryptophan	halogenase
Lycopene_cycl	PF05834.7	gi|449066937|ref|YP_007434019.1|	-	0.0076	15.2	0.1	0.2	10.5	0.1	2.2	2	0	0	2	2	2	1	Lycopene	cyclase	protein
Imm42	PF15601.1	gi|449066937|ref|YP_007434019.1|	-	0.011	15.1	0.2	0.046	13.1	0.2	1.9	2	0	0	2	2	2	0	Immunity	protein	42
Pyr_redox_3	PF13738.1	gi|449066937|ref|YP_007434019.1|	-	0.024	14.7	0.2	0.052	13.5	0.2	1.5	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_9	PF13454.1	gi|449066937|ref|YP_007434019.1|	-	0.035	13.8	0.0	0.059	13.1	0.0	1.4	1	0	0	1	1	1	0	FAD-NAD(P)-binding
XdhC_C	PF13478.1	gi|449066937|ref|YP_007434019.1|	-	0.062	13.6	0.0	1.6	9.0	0.0	2.3	2	0	0	2	2	2	0	XdhC	Rossmann	domain
YjeF_N	PF03853.10	gi|449066937|ref|YP_007434019.1|	-	0.1	12.1	0.2	5.2	6.6	0.1	3.2	4	0	0	4	4	4	0	YjeF-related	protein	N-terminus
UDPG_MGDP_dh_N	PF03721.9	gi|449066937|ref|YP_007434019.1|	-	0.12	11.7	0.2	0.21	10.9	0.1	1.3	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
2-Hacid_dh_C	PF02826.14	gi|449066937|ref|YP_007434019.1|	-	0.22	10.6	1.1	13	4.8	0.2	2.4	2	0	0	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
3HCDH_N	PF02737.13	gi|449066937|ref|YP_007434019.1|	-	0.47	10.0	2.3	1.9	8.0	0.1	2.3	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
AAA	PF00004.24	gi|449066938|ref|YP_007434020.1|	-	3.2e-84	279.7	0.0	6.5e-41	139.6	0.0	2.5	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_17	PF13207.1	gi|449066938|ref|YP_007434020.1|	-	2.8e-17	63.6	1.0	3.1e-07	31.2	0.0	3.8	3	2	0	3	3	2	2	AAA	domain
AAA_2	PF07724.9	gi|449066938|ref|YP_007434020.1|	-	7.6e-17	61.7	0.0	5.9e-09	36.0	0.0	3.0	3	0	0	3	3	2	2	AAA	domain	(Cdc48	subfamily)
AAA_14	PF13173.1	gi|449066938|ref|YP_007434020.1|	-	8.2e-16	58.0	0.0	1.6e-07	31.2	0.0	3.0	3	0	0	3	3	2	2	AAA	domain
AAA_22	PF13401.1	gi|449066938|ref|YP_007434020.1|	-	3.9e-13	49.6	2.2	6.3e-05	23.1	0.0	4.8	3	2	0	3	3	2	2	AAA	domain
AAA_5	PF07728.9	gi|449066938|ref|YP_007434020.1|	-	1.2e-12	47.7	0.7	3.1e-05	23.7	0.4	4.0	2	2	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
RuvB_N	PF05496.7	gi|449066938|ref|YP_007434020.1|	-	2.6e-11	43.0	0.0	2.8e-05	23.2	0.0	2.6	2	1	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_16	PF13191.1	gi|449066938|ref|YP_007434020.1|	-	2.2e-10	40.8	0.2	0.0021	18.0	0.0	3.9	3	2	1	4	4	3	2	AAA	ATPase	domain
AAA_33	PF13671.1	gi|449066938|ref|YP_007434020.1|	-	3.3e-10	40.0	0.0	0.00019	21.3	0.0	2.8	2	0	0	2	2	2	2	AAA	domain
AAA_18	PF13238.1	gi|449066938|ref|YP_007434020.1|	-	3.7e-10	40.2	0.0	0.00019	21.7	0.0	3.0	2	0	0	2	2	2	2	AAA	domain
TIP49	PF06068.8	gi|449066938|ref|YP_007434020.1|	-	8.6e-10	37.8	0.0	2e-05	23.4	0.0	2.5	2	0	0	2	2	2	2	TIP49	C-terminus
RNA_helicase	PF00910.17	gi|449066938|ref|YP_007434020.1|	-	6e-09	36.0	0.0	0.0033	17.5	0.0	3.2	2	1	0	2	2	2	2	RNA	helicase
IstB_IS21	PF01695.12	gi|449066938|ref|YP_007434020.1|	-	3e-08	33.2	0.0	0.0083	15.5	0.0	2.5	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
AAA_3	PF07726.6	gi|449066938|ref|YP_007434020.1|	-	8.2e-08	31.9	0.1	0.0012	18.4	0.2	2.9	2	1	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
NACHT	PF05729.7	gi|449066938|ref|YP_007434020.1|	-	2.2e-07	30.6	0.6	0.13	11.8	0.1	3.8	2	2	2	4	4	4	2	NACHT	domain
Zeta_toxin	PF06414.7	gi|449066938|ref|YP_007434020.1|	-	3.1e-07	29.6	0.4	0.0065	15.5	0.0	3.1	4	0	0	4	4	3	2	Zeta	toxin
AAA_28	PF13521.1	gi|449066938|ref|YP_007434020.1|	-	3.6e-07	30.2	0.0	0.037	13.9	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
AAA_25	PF13481.1	gi|449066938|ref|YP_007434020.1|	-	5.8e-07	29.1	1.7	0.02	14.3	0.6	3.5	2	1	0	2	2	2	1	AAA	domain
Rad17	PF03215.10	gi|449066938|ref|YP_007434020.1|	-	1.2e-06	27.5	0.0	0.03	13.0	0.0	2.6	2	0	0	2	2	2	2	Rad17	cell	cycle	checkpoint	protein
ResIII	PF04851.10	gi|449066938|ref|YP_007434020.1|	-	1.7e-06	27.9	0.0	0.031	14.1	0.0	2.9	2	2	0	2	2	2	2	Type	III	restriction	enzyme,	res	subunit
Mg_chelatase	PF01078.16	gi|449066938|ref|YP_007434020.1|	-	2.6e-06	26.7	3.1	0.0067	15.6	0.2	2.4	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
Vps4_C	PF09336.5	gi|449066938|ref|YP_007434020.1|	-	1.4e-05	24.8	0.8	0.0017	18.1	0.0	3.2	3	0	0	3	3	2	1	Vps4	C	terminal	oligomerisation	domain
Arch_ATPase	PF01637.13	gi|449066938|ref|YP_007434020.1|	-	2.9e-05	23.8	3.0	0.03	14.0	0.0	4.2	2	2	2	4	4	4	1	Archaeal	ATPase
UPF0079	PF02367.12	gi|449066938|ref|YP_007434020.1|	-	4.1e-05	23.2	0.1	0.076	12.6	0.0	2.5	2	0	0	2	2	2	2	Uncharacterised	P-loop	hydrolase	UPF0079
Viral_helicase1	PF01443.13	gi|449066938|ref|YP_007434020.1|	-	6.3e-05	22.6	0.0	0.14	11.6	0.0	2.4	2	0	0	2	2	2	2	Viral	(Superfamily	1)	RNA	helicase
ABC_tran	PF00005.22	gi|449066938|ref|YP_007434020.1|	-	8.7e-05	22.8	0.1	0.32	11.2	0.0	2.9	2	1	0	2	2	2	2	ABC	transporter
AFG1_ATPase	PF03969.11	gi|449066938|ref|YP_007434020.1|	-	8.8e-05	21.4	0.1	0.35	9.6	0.0	2.6	2	1	0	2	2	2	2	AFG1-like	ATPase
AAA_19	PF13245.1	gi|449066938|ref|YP_007434020.1|	-	0.0001	22.0	0.0	0.49	10.1	0.0	2.7	2	0	0	2	2	2	2	Part	of	AAA	domain
Sigma54_activat	PF00158.21	gi|449066938|ref|YP_007434020.1|	-	0.00011	21.6	0.1	0.94	8.9	0.0	3.4	2	2	0	2	2	2	2	Sigma-54	interaction	domain
AAA_24	PF13479.1	gi|449066938|ref|YP_007434020.1|	-	0.00012	21.8	2.6	0.057	12.9	0.4	3.1	3	0	0	3	3	3	1	AAA	domain
NB-ARC	PF00931.17	gi|449066938|ref|YP_007434020.1|	-	0.00013	20.9	1.0	0.66	8.7	0.0	3.3	2	1	1	3	3	3	1	NB-ARC	domain
KTI12	PF08433.5	gi|449066938|ref|YP_007434020.1|	-	0.00019	20.7	0.4	0.74	8.9	0.0	4.1	4	0	0	4	4	4	1	Chromatin	associated	protein	KTI12
DUF815	PF05673.8	gi|449066938|ref|YP_007434020.1|	-	0.00022	20.2	0.0	0.53	9.1	0.0	2.7	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
Sigma54_activ_2	PF14532.1	gi|449066938|ref|YP_007434020.1|	-	0.00026	21.0	0.0	1.1	9.2	0.0	2.7	2	0	0	2	2	2	2	Sigma-54	interaction	domain
MMR_HSR1	PF01926.18	gi|449066938|ref|YP_007434020.1|	-	0.00031	20.6	0.6	0.18	11.7	0.0	3.9	4	1	0	4	4	3	1	50S	ribosome-binding	GTPase
KaiC	PF06745.8	gi|449066938|ref|YP_007434020.1|	-	0.00043	19.4	0.6	1.4	7.9	0.0	3.4	2	1	0	2	2	2	1	KaiC
SKI	PF01202.17	gi|449066938|ref|YP_007434020.1|	-	0.00054	19.8	0.8	0.32	10.8	0.5	3.0	2	1	1	3	3	3	1	Shikimate	kinase
ATP-synt_ab	PF00006.20	gi|449066938|ref|YP_007434020.1|	-	0.00084	18.8	0.0	0.67	9.4	0.0	2.4	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
Guanylate_kin	PF00625.16	gi|449066938|ref|YP_007434020.1|	-	0.00085	18.8	0.1	1.2	8.5	0.0	3.5	2	1	1	3	3	3	1	Guanylate	kinase
AAA_30	PF13604.1	gi|449066938|ref|YP_007434020.1|	-	0.0013	18.3	0.1	1.7	8.1	0.0	3.1	2	1	0	2	2	2	1	AAA	domain
Bac_DnaA	PF00308.13	gi|449066938|ref|YP_007434020.1|	-	0.0022	17.6	0.5	1.8	8.1	0.0	3.2	3	1	0	3	3	3	1	Bacterial	dnaA	protein
MFS_Mycoplasma	PF07672.8	gi|449066938|ref|YP_007434020.1|	-	0.0057	15.8	0.7	0.009	15.2	0.5	1.2	1	0	0	1	1	1	1	Mycoplasma	MFS	transporter
AAA_11	PF13086.1	gi|449066938|ref|YP_007434020.1|	-	0.0068	15.9	0.0	3.3	7.2	0.0	2.7	2	0	0	2	2	2	0	AAA	domain
NTPase_1	PF03266.10	gi|449066938|ref|YP_007434020.1|	-	0.008	15.8	0.1	1.5	8.5	0.1	3.0	2	1	1	3	3	3	1	NTPase
DAP3	PF10236.4	gi|449066938|ref|YP_007434020.1|	-	0.013	14.4	0.0	3	6.6	0.0	2.3	2	0	0	2	2	2	0	Mitochondrial	ribosomal	death-associated	protein	3
Parvo_NS1	PF01057.12	gi|449066938|ref|YP_007434020.1|	-	0.019	13.8	0.0	3.7	6.3	0.0	2.4	2	0	0	2	2	2	0	Parvovirus	non-structural	protein	NS1
SRPRB	PF09439.5	gi|449066938|ref|YP_007434020.1|	-	0.031	13.5	0.1	3.6	6.7	0.0	3.3	3	0	0	3	3	3	0	Signal	recognition	particle	receptor	beta	subunit
PhoH	PF02562.11	gi|449066938|ref|YP_007434020.1|	-	0.031	13.4	0.1	11	5.1	0.0	3.0	3	0	0	3	3	2	0	PhoH-like	protein
Glutaredoxin	PF00462.19	gi|449066938|ref|YP_007434020.1|	-	0.036	14.0	0.0	0.14	12.1	0.0	2.1	1	0	0	1	1	1	0	Glutaredoxin
T2SE	PF00437.15	gi|449066938|ref|YP_007434020.1|	-	0.044	12.6	0.0	3.9	6.2	0.0	2.4	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
PduV-EutP	PF10662.4	gi|449066938|ref|YP_007434020.1|	-	0.049	13.1	0.1	1.7	8.0	0.0	2.4	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
CPT	PF07931.7	gi|449066938|ref|YP_007434020.1|	-	0.052	13.1	0.0	3.6	7.1	0.0	2.4	2	0	0	2	2	2	0	Chloramphenicol	phosphotransferase-like	protein
DUF258	PF03193.11	gi|449066938|ref|YP_007434020.1|	-	0.065	12.4	0.0	8.4	5.5	0.0	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF258
PPV_E1_C	PF00519.12	gi|449066938|ref|YP_007434020.1|	-	0.079	11.5	0.5	5.1	5.5	0.0	2.1	2	0	0	2	2	2	0	Papillomavirus	helicase
cobW	PF02492.14	gi|449066938|ref|YP_007434020.1|	-	0.089	12.2	0.4	4.9	6.5	0.0	2.6	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_10	PF12846.2	gi|449066938|ref|YP_007434020.1|	-	0.092	12.1	5.4	2.7	7.3	0.4	4.0	2	2	0	3	3	3	0	AAA-like	domain
GlutR_N	PF05201.10	gi|449066938|ref|YP_007434020.1|	-	0.1	12.1	0.0	0.25	10.9	0.0	1.6	1	0	0	1	1	1	0	Glutamyl-tRNAGlu	reductase,	N-terminal	domain
Inositol_P	PF00459.20	gi|449066939|ref|YP_007434021.1|	-	9.4e-23	80.8	0.0	1.2e-22	80.5	0.0	1.1	1	0	0	1	1	1	1	Inositol	monophosphatase	family
FBPase	PF00316.15	gi|449066939|ref|YP_007434021.1|	-	0.00028	19.8	0.2	0.00037	19.4	0.1	1.2	1	0	0	1	1	1	1	Fructose-1-6-bisphosphatase
Pyr_redox_2	PF07992.9	gi|449066940|ref|YP_007434022.1|	-	3.9e-33	115.0	0.9	5.5e-33	114.5	0.7	1.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|449066940|ref|YP_007434022.1|	-	4.3e-15	56.3	0.0	2.8e-14	53.6	0.0	2.0	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|449066940|ref|YP_007434022.1|	-	5.8e-14	52.2	3.5	6.6e-14	52.0	0.4	2.5	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|449066940|ref|YP_007434022.1|	-	6.2e-06	24.9	0.1	0.021	13.3	0.0	3.3	3	0	0	3	3	3	1	HI0933-like	protein
K_oxygenase	PF13434.1	gi|449066940|ref|YP_007434022.1|	-	2.3e-05	23.4	0.0	0.13	11.1	0.0	3.1	2	1	1	3	3	3	1	L-lysine	6-monooxygenase	(NADPH-requiring)
FAD_oxidored	PF12831.2	gi|449066940|ref|YP_007434022.1|	-	5.6e-05	22.3	0.4	0.052	12.6	0.0	2.6	3	0	0	3	3	3	2	FAD	dependent	oxidoreductase
GIDA	PF01134.17	gi|449066940|ref|YP_007434022.1|	-	6.1e-05	22.0	10.7	0.046	12.5	0.9	4.4	2	2	3	5	5	5	2	Glucose	inhibited	division	protein	A
DAO	PF01266.19	gi|449066940|ref|YP_007434022.1|	-	0.00051	19.0	0.8	0.023	13.5	0.0	2.6	2	1	0	2	2	2	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|449066940|ref|YP_007434022.1|	-	0.00052	18.9	2.3	0.6	8.8	0.0	3.0	2	1	2	4	4	4	2	FAD	binding	domain
NAD_binding_7	PF13241.1	gi|449066940|ref|YP_007434022.1|	-	0.0012	19.0	0.7	0.02	15.1	0.1	2.5	2	1	0	2	2	2	1	Putative	NAD(P)-binding
Thi4	PF01946.12	gi|449066940|ref|YP_007434022.1|	-	0.0037	16.4	0.8	0.89	8.6	0.0	2.5	3	0	0	3	3	3	2	Thi4	family
NAD_binding_9	PF13454.1	gi|449066940|ref|YP_007434022.1|	-	0.051	13.3	0.1	2.4	7.9	0.0	2.9	3	0	0	3	3	3	0	FAD-NAD(P)-binding
Mqo	PF06039.10	gi|449066940|ref|YP_007434022.1|	-	0.058	11.5	0.1	0.085	11.0	0.0	1.2	1	0	0	1	1	1	0	Malate:quinone	oxidoreductase	(Mqo)
Shikimate_DH	PF01488.15	gi|449066940|ref|YP_007434022.1|	-	0.061	13.4	0.7	0.18	11.9	0.0	2.0	3	0	0	3	3	3	0	Shikimate	/	quinate	5-dehydrogenase
DUF4346	PF14251.1	gi|449066941|ref|YP_007434023.1|	-	1.1e-06	28.4	0.4	1e-05	25.2	0.1	2.4	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4346)
DUF512	PF04459.7	gi|449066941|ref|YP_007434023.1|	-	0.012	14.7	0.2	0.02	13.9	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF512)
Baculo_p26	PF04766.7	gi|449066941|ref|YP_007434023.1|	-	0.1	11.8	0.0	0.2	10.8	0.0	1.4	1	0	0	1	1	1	0	Nucleopolyhedrovirus	p26	protein
PTPS	PF01242.14	gi|449066943|ref|YP_007434025.1|	-	4.2e-23	81.3	0.0	4.6e-23	81.2	0.0	1.0	1	0	0	1	1	1	1	6-pyruvoyl	tetrahydropterin	synthase
DUF1958	PF09211.5	gi|449066943|ref|YP_007434025.1|	-	0.45	10.6	2.6	4.6	7.3	0.1	2.5	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF1958)
SLIDE	PF09111.5	gi|449066944|ref|YP_007434026.1|	-	0.029	14.1	1.6	3.5	7.3	0.0	2.4	2	1	0	2	2	2	0	SLIDE
FlgN	PF05130.7	gi|449066944|ref|YP_007434026.1|	-	0.039	14.1	0.5	0.11	12.7	0.3	1.7	1	1	0	1	1	1	0	FlgN	protein
Ribosomal_S30AE	PF02482.14	gi|449066944|ref|YP_007434026.1|	-	0.095	13.1	0.5	0.27	11.6	0.2	1.9	2	0	0	2	2	2	0	Sigma	54	modulation	protein	/	S30EA	ribosomal	protein
Syntaxin-6_N	PF09177.6	gi|449066944|ref|YP_007434026.1|	-	0.19	12.1	1.5	0.45	10.9	0.3	2.0	1	1	1	2	2	2	0	Syntaxin	6,	N-terminal
Baculo_PEP_C	PF04513.7	gi|449066944|ref|YP_007434026.1|	-	0.31	10.8	2.2	0.91	9.3	0.2	2.3	3	0	0	3	3	3	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
FliG_N	PF14842.1	gi|449066945|ref|YP_007434027.1|	-	0.14	12.3	0.1	23	5.1	0.0	2.3	2	0	0	2	2	2	0	FliG	N-terminal	domain
HEPN	PF05168.9	gi|449066946|ref|YP_007434028.1|	-	0.011	15.6	1.5	0.022	14.6	1.1	1.5	1	1	0	1	1	1	0	HEPN	domain
DNA_pol3_a_NII	PF11490.3	gi|449066947|ref|YP_007434029.1|	-	0.04	13.5	0.1	0.045	13.3	0.1	1.1	1	0	0	1	1	1	0	DNA	polymerase	III	polC-type	N-terminus	II
MAF_flag10	PF01973.13	gi|449066948|ref|YP_007434030.1|	-	7.5e-30	103.6	0.1	1e-29	103.2	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF115
TPK_catalytic	PF04263.11	gi|449066948|ref|YP_007434030.1|	-	0.0058	16.2	0.1	0.028	14.0	0.0	2.0	2	0	0	2	2	2	1	Thiamin	pyrophosphokinase,	catalytic	domain
HMGL-like	PF00682.14	gi|449066949|ref|YP_007434031.1|	-	1.1e-80	270.7	0.3	1.5e-80	270.2	0.2	1.2	1	0	0	1	1	1	1	HMGL-like
Lactamase_B_3	PF13483.1	gi|449066950|ref|YP_007434032.1|	-	2.6e-34	118.2	0.1	3.2e-34	117.9	0.1	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.2	gi|449066950|ref|YP_007434032.1|	-	1.8e-14	53.7	1.4	6.7e-09	35.5	0.0	2.1	1	1	1	2	2	2	2	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|449066950|ref|YP_007434032.1|	-	0.96	9.0	5.4	28	4.2	0.0	2.5	2	1	0	2	2	2	0	Metallo-beta-lactamase	superfamily
RHH_1	PF01402.16	gi|449066951|ref|YP_007434033.1|	-	3.8e-11	42.3	0.5	5.6e-11	41.8	0.4	1.3	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
RHH_3	PF12651.2	gi|449066951|ref|YP_007434033.1|	-	6.1e-07	29.0	1.5	7.1e-07	28.8	0.5	1.5	1	1	1	2	2	2	1	Ribbon-helix-helix	domain
Ribosomal_L17	PF01196.14	gi|449066951|ref|YP_007434033.1|	-	0.11	13.1	0.1	0.11	13.0	0.1	1.1	1	0	0	1	1	1	0	Ribosomal	protein	L17
Ax_dynein_light	PF10211.4	gi|449066952|ref|YP_007434034.1|	-	0.095	12.5	3.7	0.097	12.5	2.5	1.2	1	0	0	1	1	1	0	Axonemal	dynein	light	chain
HalX	PF08663.5	gi|449066952|ref|YP_007434034.1|	-	2.3	8.2	5.6	36	4.4	3.3	2.6	2	1	0	2	2	2	0	HalX	domain
AsnC_trans_reg	PF01037.16	gi|449066953|ref|YP_007434035.1|	-	2.3e-10	40.0	0.4	2.5e-10	39.9	0.3	1.1	1	0	0	1	1	1	1	AsnC	family
ABC2_membrane_3	PF12698.2	gi|449066954|ref|YP_007434036.1|	-	5.6e-22	78.2	42.9	6.7e-22	77.9	29.7	1.1	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|449066954|ref|YP_007434036.1|	-	4.1e-08	32.6	46.8	1.1e-07	31.2	32.4	1.7	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.2	gi|449066954|ref|YP_007434036.1|	-	4e-06	25.9	43.3	6.1e-05	22.0	30.0	2.9	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
SufE	PF02657.10	gi|449066954|ref|YP_007434036.1|	-	0.011	15.3	0.0	0.67	9.5	0.0	2.2	2	0	0	2	2	2	0	Fe-S	metabolism	associated	domain
DUF2754	PF10953.3	gi|449066954|ref|YP_007434036.1|	-	0.013	15.4	7.3	1.1	9.3	0.0	3.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2754)
ABC_tran	PF00005.22	gi|449066955|ref|YP_007434037.1|	-	9e-26	90.8	0.0	1.3e-25	90.2	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|449066955|ref|YP_007434037.1|	-	2.3e-14	54.0	1.1	1.4e-06	28.5	0.0	2.2	1	1	1	2	2	2	2	AAA	domain
AAA_23	PF13476.1	gi|449066955|ref|YP_007434037.1|	-	2.5e-05	24.6	1.3	3.5e-05	24.2	0.9	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|449066955|ref|YP_007434037.1|	-	0.0012	18.2	0.1	0.0024	17.3	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_30	PF13604.1	gi|449066955|ref|YP_007434037.1|	-	0.0018	17.8	0.0	0.0031	17.1	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|449066955|ref|YP_007434037.1|	-	0.0038	16.4	0.3	0.24	10.6	0.1	2.1	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
AAA_17	PF13207.1	gi|449066955|ref|YP_007434037.1|	-	0.031	15.1	0.3	0.058	14.2	0.2	1.7	1	1	0	1	1	1	0	AAA	domain
UPF0079	PF02367.12	gi|449066955|ref|YP_007434037.1|	-	0.034	13.7	0.1	0.065	12.8	0.1	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
T2SE	PF00437.15	gi|449066955|ref|YP_007434037.1|	-	0.043	12.7	0.1	0.064	12.1	0.1	1.2	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_19	PF13245.1	gi|449066955|ref|YP_007434037.1|	-	0.053	13.2	0.0	0.11	12.2	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
SRP54	PF00448.17	gi|449066955|ref|YP_007434037.1|	-	0.06	12.7	0.1	0.1	12.0	0.1	1.3	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA	PF00004.24	gi|449066955|ref|YP_007434037.1|	-	0.066	13.4	0.0	0.13	12.4	0.0	1.5	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.1	gi|449066955|ref|YP_007434037.1|	-	0.089	12.7	0.0	0.16	11.9	0.0	1.3	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_10	PF12846.2	gi|449066955|ref|YP_007434037.1|	-	0.11	11.9	0.2	0.63	9.4	0.0	1.9	1	1	0	2	2	2	0	AAA-like	domain
SRI	PF08236.6	gi|449066956|ref|YP_007434038.1|	-	0.0049	16.7	0.1	0.012	15.5	0.1	1.6	1	0	0	1	1	1	1	SRI	(Set2	Rpb1	interacting)	domain
DUF2265	PF10023.4	gi|449066956|ref|YP_007434038.1|	-	0.026	13.6	1.8	0.034	13.2	0.3	1.7	2	0	0	2	2	2	0	Predicted	aminopeptidase	(DUF2265)
DUF3368	PF11848.3	gi|449066956|ref|YP_007434038.1|	-	0.1	12.1	0.0	0.27	10.8	0.0	1.8	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3368)
Pantoate_transf	PF02548.10	gi|449066957|ref|YP_007434039.1|	-	2.5e-95	318.5	0.2	2.8e-95	318.3	0.1	1.0	1	0	0	1	1	1	1	Ketopantoate	hydroxymethyltransferase
DUF849	PF05853.7	gi|449066957|ref|YP_007434039.1|	-	0.14	11.0	0.1	0.21	10.4	0.1	1.2	1	0	0	1	1	1	0	Prokaryotic	protein	of	unknown	function	(DUF849)
DUF137	PF02006.11	gi|449066958|ref|YP_007434040.1|	-	6.2e-81	270.0	4.6	8.5e-81	269.5	3.2	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF137
TPP_enzyme_M	PF00205.17	gi|449066958|ref|YP_007434040.1|	-	0.018	14.7	0.4	0.16	11.7	0.3	2.2	1	1	0	1	1	1	0	Thiamine	pyrophosphate	enzyme,	central	domain
Arabinose_Isome	PF02610.10	gi|449066958|ref|YP_007434040.1|	-	0.026	13.5	0.4	0.056	12.3	0.0	1.6	2	0	0	2	2	2	0	L-arabinose	isomerase
Erf4	PF10256.4	gi|449066958|ref|YP_007434040.1|	-	0.031	14.1	0.5	0.051	13.4	0.3	1.4	1	0	0	1	1	1	0	Golgin	subfamily	A	member	7/ERF4	family
GHMP_kinases_N	PF00288.21	gi|449066959|ref|YP_007434041.1|	-	8e-05	22.6	0.3	0.00013	21.9	0.2	1.3	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
TetR	PF13972.1	gi|449066960|ref|YP_007434042.1|	-	0.038	13.4	0.4	1.3	8.4	0.1	2.2	2	0	0	2	2	2	0	Bacterial	transcriptional	repressor
MoaE	PF02391.12	gi|449066961|ref|YP_007434043.1|	-	1.1e-17	63.9	0.2	1.8e-17	63.2	0.2	1.3	1	0	0	1	1	1	1	MoaE	protein
ThiS	PF02597.15	gi|449066961|ref|YP_007434043.1|	-	1.6e-12	47.6	0.3	1.8e-11	44.3	0.1	2.5	2	0	0	2	2	2	1	ThiS	family
UPF0278	PF08745.6	gi|449066961|ref|YP_007434043.1|	-	0.0027	16.9	0.1	0.0048	16.1	0.1	1.3	1	0	0	1	1	1	1	UPF0278	family
Phos_pyr_kin	PF08543.7	gi|449066962|ref|YP_007434044.1|	-	4.8e-68	229.0	0.0	6.1e-68	228.6	0.0	1.1	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
Aldolase_2	PF10120.4	gi|449066962|ref|YP_007434044.1|	-	8.8e-53	178.1	0.0	1.3e-52	177.5	0.0	1.3	1	0	0	1	1	1	1	Putative	aldolase
PfkB	PF00294.19	gi|449066962|ref|YP_007434044.1|	-	2e-08	33.7	0.0	1.5e-07	30.8	0.0	1.9	2	0	0	2	2	2	1	pfkB	family	carbohydrate	kinase
Carb_kinase	PF01256.12	gi|449066962|ref|YP_007434044.1|	-	0.013	14.7	0.0	0.023	13.9	0.0	1.3	1	0	0	1	1	1	0	Carbohydrate	kinase
HD_3	PF13023.1	gi|449066963|ref|YP_007434045.1|	-	2.9e-14	53.1	0.0	8.9e-14	51.5	0.0	1.7	1	1	0	1	1	1	1	HD	domain
HD	PF01966.17	gi|449066963|ref|YP_007434045.1|	-	1.9e-06	27.8	0.0	5.3e-06	26.4	0.0	1.7	1	1	0	1	1	1	1	HD	domain
HDOD	PF08668.7	gi|449066963|ref|YP_007434045.1|	-	0.00021	20.6	0.0	0.0003	20.1	0.0	1.2	1	0	0	1	1	1	1	HDOD	domain
HD_2	PF12917.2	gi|449066963|ref|YP_007434045.1|	-	0.022	14.5	2.0	0.82	9.4	1.4	2.0	1	1	0	1	1	1	0	HD	containing	hydrolase-like	enzyme
HHH_4	PF14490.1	gi|449066963|ref|YP_007434045.1|	-	0.086	12.6	0.2	0.2	11.4	0.1	1.6	1	0	0	1	1	1	0	Helix-hairpin-helix	containing	domain
Pyrophosphatase	PF00719.14	gi|449066964|ref|YP_007434046.1|	-	6.6e-62	207.5	0.1	7.4e-62	207.4	0.1	1.0	1	0	0	1	1	1	1	Inorganic	pyrophosphatase
Glyco_tranf_2_3	PF13641.1	gi|449066965|ref|YP_007434047.1|	-	1.1e-27	97.3	0.0	1.6e-27	96.8	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|449066965|ref|YP_007434047.1|	-	6.1e-24	84.7	0.1	1.1e-23	84.0	0.1	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glycos_transf_2	PF00535.21	gi|449066965|ref|YP_007434047.1|	-	4.2e-20	72.1	0.2	6.4e-20	71.5	0.1	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.4	gi|449066965|ref|YP_007434047.1|	-	2.8e-17	62.7	1.3	3.9e-17	62.2	0.9	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_transf_21	PF13506.1	gi|449066965|ref|YP_007434047.1|	-	4.2e-11	42.4	0.0	2.2e-09	36.8	0.0	2.2	2	0	0	2	2	2	1	Glycosyl	transferase	family	21
Cellulose_synt	PF03552.9	gi|449066965|ref|YP_007434047.1|	-	0.0012	17.2	1.1	0.0026	16.1	0.8	1.5	1	0	0	1	1	1	1	Cellulose	synthase
DUF2854	PF11016.3	gi|449066965|ref|YP_007434047.1|	-	0.015	14.8	0.0	0.038	13.5	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2854)
Glyco_tranf_2_5	PF13712.1	gi|449066965|ref|YP_007434047.1|	-	0.077	12.2	0.7	1.3	8.1	0.0	2.2	1	1	1	2	2	2	0	Glycosyltransferase	like	family
FIST_C	PF10442.4	gi|449066965|ref|YP_007434047.1|	-	0.19	11.7	0.0	0.32	10.9	0.0	1.4	1	0	0	1	1	1	0	FIST	C	domain
TGS	PF02824.16	gi|449066966|ref|YP_007434048.1|	-	8.6e-19	67.1	0.0	1.7e-18	66.1	0.0	1.5	1	0	0	1	1	1	1	TGS	domain
RNase_HII	PF01351.13	gi|449066967|ref|YP_007434049.1|	-	4.8e-45	153.6	0.1	5.5e-45	153.4	0.0	1.0	1	0	0	1	1	1	1	Ribonuclease	HII
AsiA	PF09010.5	gi|449066967|ref|YP_007434049.1|	-	0.03	14.2	0.2	6.9	6.6	0.0	2.7	3	0	0	3	3	3	0	Anti-Sigma	Factor	A
NMD3	PF04981.8	gi|449066968|ref|YP_007434050.1|	-	2.2e-43	148.0	2.1	2.5e-43	147.8	1.4	1.0	1	0	0	1	1	1	1	NMD3	family
DZR	PF12773.2	gi|449066968|ref|YP_007434050.1|	-	0.0015	18.3	0.3	0.071	12.9	0.1	2.3	2	0	0	2	2	2	1	Double	zinc	ribbon
Dioxygenase_N	PF04444.9	gi|449066968|ref|YP_007434050.1|	-	0.062	13.2	0.2	0.98	9.4	0.0	2.4	2	0	0	2	2	2	0	Catechol	dioxygenase	N	terminus
DUF424	PF04242.8	gi|449066969|ref|YP_007434051.1|	-	1.8e-24	85.6	1.0	2.1e-24	85.3	0.7	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF424)
eIF-5_eIF-2B	PF01873.12	gi|449066970|ref|YP_007434052.1|	-	1.5e-29	102.1	0.2	1.8e-29	101.9	0.1	1.0	1	0	0	1	1	1	1	Domain	found	in	IF2B/IF5
RNA_POL_M_15KD	PF02150.11	gi|449066970|ref|YP_007434052.1|	-	0.0088	15.7	0.1	0.13	11.9	0.0	2.2	2	0	0	2	2	2	1	RNA	polymerases	M/15	Kd	subunit
SUI1	PF01253.17	gi|449066970|ref|YP_007434052.1|	-	0.05	13.4	0.0	0.092	12.5	0.0	1.4	1	0	0	1	1	1	0	Translation	initiation	factor	SUI1
zinc_ribbon_6	PF14599.1	gi|449066970|ref|YP_007434052.1|	-	0.074	12.8	0.5	2	8.2	0.0	2.3	2	0	0	2	2	2	0	Zinc-ribbon
DUF2387	PF09526.5	gi|449066970|ref|YP_007434052.1|	-	0.082	12.8	0.3	0.15	11.9	0.2	1.4	1	0	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
Ribosomal_S27e	PF01667.12	gi|449066970|ref|YP_007434052.1|	-	0.088	12.3	0.6	0.16	11.4	0.4	1.4	1	0	0	1	1	1	0	Ribosomal	protein	S27
Cys_rich_KTR	PF14205.1	gi|449066970|ref|YP_007434052.1|	-	0.33	10.4	4.2	1.2	8.6	0.0	2.7	2	1	1	3	3	3	0	Cysteine-rich	KTR
Radical_SAM	PF04055.16	gi|449066971|ref|YP_007434053.1|	-	4.5e-26	92.0	0.3	2.3e-25	89.6	0.1	2.0	2	0	0	2	2	2	1	Radical	SAM	superfamily
UPF0004	PF00919.15	gi|449066971|ref|YP_007434053.1|	-	4.1e-15	55.3	0.2	7.6e-15	54.5	0.1	1.4	1	0	0	1	1	1	1	Uncharacterized	protein	family	UPF0004
TRAM	PF01938.15	gi|449066971|ref|YP_007434053.1|	-	1.8e-06	27.6	0.1	3.8e-06	26.6	0.0	1.5	1	0	0	1	1	1	1	TRAM	domain
Thiolase_N	PF00108.18	gi|449066972|ref|YP_007434054.1|	-	6.8e-88	294.0	0.9	8.2e-88	293.8	0.7	1.1	1	0	0	1	1	1	1	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.13	gi|449066972|ref|YP_007434054.1|	-	4.4e-35	119.7	0.0	1e-34	118.6	0.0	1.6	1	0	0	1	1	1	1	Thiolase,	C-terminal	domain
ketoacyl-synt	PF00109.21	gi|449066972|ref|YP_007434054.1|	-	2e-05	24.2	1.5	5.5e-05	22.7	1.0	1.7	1	1	1	2	2	2	1	Beta-ketoacyl	synthase,	N-terminal	domain
eIF-1a	PF01176.14	gi|449066973|ref|YP_007434055.1|	-	2.7e-25	87.5	0.5	4e-25	87.0	0.4	1.3	1	0	0	1	1	1	1	Translation	initiation	factor	1A	/	IF-1
RIO1	PF01163.17	gi|449066974|ref|YP_007434056.1|	-	1.2e-63	213.8	0.2	1.7e-63	213.4	0.1	1.2	1	0	0	1	1	1	1	RIO1	family
Kdo	PF06293.9	gi|449066974|ref|YP_007434056.1|	-	0.00038	19.5	0.0	0.0024	16.9	0.0	2.0	1	1	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
APH	PF01636.18	gi|449066974|ref|YP_007434056.1|	-	0.00094	18.9	0.0	0.0029	17.4	0.0	1.7	1	1	1	2	2	2	1	Phosphotransferase	enzyme	family
KH_1	PF00013.24	gi|449066975|ref|YP_007434057.1|	-	9.1e-06	25.2	9.5	0.00018	21.0	2.6	2.3	2	0	0	2	2	2	2	KH	domain
KH_3	PF13014.1	gi|449066975|ref|YP_007434057.1|	-	0.0002	20.9	3.0	0.012	15.2	0.3	2.6	2	0	0	2	2	2	2	KH	domain
Enkurin	PF13864.1	gi|449066975|ref|YP_007434057.1|	-	0.028	14.6	0.2	2.3	8.4	0.0	2.6	2	0	0	2	2	2	0	Calmodulin-binding
KH_2	PF07650.12	gi|449066975|ref|YP_007434057.1|	-	1.7	8.2	7.4	0.78	9.3	0.7	2.6	3	0	0	3	3	3	0	KH	domain
DUF3883	PF13020.1	gi|449066976|ref|YP_007434058.1|	-	0.0016	18.1	0.4	0.0043	16.7	0.2	1.8	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF3883)
DUF1152	PF06626.7	gi|449066977|ref|YP_007434059.1|	-	2.9e-122	407.4	0.1	3.4e-122	407.2	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1152)
Pribosyltran	PF00156.22	gi|449066977|ref|YP_007434059.1|	-	0.0042	16.8	0.0	0.015	14.9	0.0	1.9	2	0	0	2	2	2	1	Phosphoribosyl	transferase	domain
HHH_8	PF14716.1	gi|449066977|ref|YP_007434059.1|	-	0.19	11.9	1.4	0.27	11.4	0.2	1.8	2	0	0	2	2	2	0	Helix-hairpin-helix	domain
MMgT	PF10270.4	gi|449066979|ref|YP_007434061.1|	-	0.00056	20.3	0.0	0.00078	19.8	0.0	1.1	1	0	0	1	1	1	1	Membrane	magnesium	transporter
zf-C2H2_4	PF13894.1	gi|449066979|ref|YP_007434061.1|	-	0.026	14.8	0.3	0.044	14.1	0.2	1.4	1	0	0	1	1	1	0	C2H2-type	zinc	finger
S_100	PF01023.14	gi|449066979|ref|YP_007434061.1|	-	0.12	11.6	0.5	0.41	10.0	0.2	1.9	2	0	0	2	2	2	0	S-100/ICaBP	type	calcium	binding	domain
Cys_Met_Meta_PP	PF01053.15	gi|449066980|ref|YP_007434062.1|	-	2.4e-122	407.9	0.0	2.9e-122	407.6	0.0	1.0	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Aminotran_1_2	PF00155.16	gi|449066980|ref|YP_007434062.1|	-	2.4e-10	39.9	0.1	2.1e-09	36.8	0.1	2.1	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.14	gi|449066980|ref|YP_007434062.1|	-	8.5e-08	31.3	0.3	5.3e-07	28.7	0.2	2.2	1	1	0	1	1	1	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.16	gi|449066980|ref|YP_007434062.1|	-	0.0018	17.5	0.0	0.015	14.4	0.0	2.1	1	1	0	1	1	1	1	Beta-eliminating	lyase
Met_gamma_lyase	PF06838.6	gi|449066980|ref|YP_007434062.1|	-	0.016	13.5	0.2	0.99	7.6	0.1	2.1	1	1	0	1	1	1	0	Methionine	gamma-lyase
SLA_LP_auto_ag	PF05889.8	gi|449066980|ref|YP_007434062.1|	-	0.077	11.4	0.3	0.11	10.9	0.2	1.5	1	1	0	1	1	1	0	Soluble	liver	antigen/liver	pancreas	antigen	(SLA/LP	autoantigen)
SRP54	PF00448.17	gi|449066980|ref|YP_007434062.1|	-	0.12	11.8	0.0	0.26	10.7	0.0	1.5	1	1	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
GHMP_kinases_N	PF00288.21	gi|449066981|ref|YP_007434063.1|	-	3.1e-16	59.2	3.3	9e-16	57.6	2.0	2.0	2	0	0	2	2	2	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|449066981|ref|YP_007434063.1|	-	4.5e-08	33.1	0.1	1.6e-07	31.4	0.0	1.9	2	0	0	2	2	2	1	GHMP	kinases	C	terminal
DUF647	PF04884.9	gi|449066981|ref|YP_007434063.1|	-	0.021	14.0	0.0	0.05	12.7	0.0	1.6	2	0	0	2	2	2	0	Vitamin	B6	photo-protection	and	homoeostasis
MoeA_N	PF03453.12	gi|449066982|ref|YP_007434064.1|	-	1.7e-45	154.2	0.0	4.6e-45	152.8	0.0	1.7	1	0	0	1	1	1	1	MoeA	N-terminal	region	(domain	I	and	II)
MoCF_biosynth	PF00994.19	gi|449066982|ref|YP_007434064.1|	-	6.8e-29	100.1	0.1	1.2e-28	99.2	0.1	1.4	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
MoeA_C	PF03454.10	gi|449066982|ref|YP_007434064.1|	-	5.7e-14	51.8	0.0	1.7e-13	50.3	0.0	1.9	1	0	0	1	1	1	1	MoeA	C-terminal	region	(domain	IV)
PqqD	PF05402.7	gi|449066983|ref|YP_007434065.1|	-	3.4e-11	42.9	0.1	4.8e-11	42.5	0.1	1.2	1	0	0	1	1	1	1	Coenzyme	PQQ	synthesis	protein	D	(PqqD)
tRNA_anti-codon	PF01336.20	gi|449066984|ref|YP_007434066.1|	-	7.9e-07	28.8	0.2	1.2e-06	28.2	0.2	1.2	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
POT1	PF02765.12	gi|449066984|ref|YP_007434066.1|	-	0.041	13.7	0.0	0.15	11.9	0.0	1.7	1	1	0	1	1	1	0	Telomeric	single	stranded	DNA	binding	POT1/CDC13
GTP_EFTU_D2	PF03144.20	gi|449066984|ref|YP_007434066.1|	-	0.067	13.3	0.1	0.5	10.5	0.0	2.1	2	0	0	2	2	2	0	Elongation	factor	Tu	domain	2
AAA_5	PF07728.9	gi|449066985|ref|YP_007434067.1|	-	4.6e-27	94.4	0.1	1.5e-26	92.7	0.0	1.9	2	1	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.1	gi|449066985|ref|YP_007434067.1|	-	6e-07	29.6	0.4	3.4e-06	27.1	0.0	2.3	1	1	1	2	2	2	1	AAA	ATPase	domain
AAA	PF00004.24	gi|449066985|ref|YP_007434067.1|	-	1.6e-05	25.1	0.2	0.00037	20.7	0.0	2.7	3	1	0	3	3	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Mg_chelatase	PF01078.16	gi|449066985|ref|YP_007434067.1|	-	3.7e-05	22.9	0.1	0.00034	19.8	0.0	2.2	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_3	PF07726.6	gi|449066985|ref|YP_007434067.1|	-	0.00015	21.3	0.0	0.00024	20.7	0.0	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.1	gi|449066985|ref|YP_007434067.1|	-	0.00047	20.3	0.6	0.0058	16.7	0.0	2.9	2	2	0	2	2	2	1	AAA	domain
MCM	PF00493.18	gi|449066985|ref|YP_007434067.1|	-	0.0012	17.7	0.0	0.0069	15.2	0.0	2.1	2	0	0	2	2	2	1	MCM2/3/5	family
Sigma54_activat	PF00158.21	gi|449066985|ref|YP_007434067.1|	-	0.0024	17.3	0.0	0.0089	15.5	0.0	1.9	1	1	0	1	1	1	1	Sigma-54	interaction	domain
PMC2NT	PF08066.7	gi|449066985|ref|YP_007434067.1|	-	0.036	14.3	0.1	0.11	12.7	0.0	1.8	1	0	0	1	1	1	0	PMC2NT	(NUC016)	domain
Sigma54_activ_2	PF14532.1	gi|449066985|ref|YP_007434067.1|	-	0.058	13.4	0.4	0.61	10.1	0.0	2.7	2	2	0	2	2	2	0	Sigma-54	interaction	domain
AAA_17	PF13207.1	gi|449066985|ref|YP_007434067.1|	-	0.13	13.0	0.7	0.71	10.7	0.5	2.4	1	1	0	1	1	1	0	AAA	domain
VWA_2	PF13519.1	gi|449066986|ref|YP_007434068.1|	-	1.5e-09	38.1	0.0	3.3e-09	37.0	0.0	1.5	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.23	gi|449066986|ref|YP_007434068.1|	-	4.5e-08	33.0	0.4	1.4e-07	31.4	0.0	1.9	2	0	0	2	2	2	1	von	Willebrand	factor	type	A	domain
VWA_3	PF13768.1	gi|449066986|ref|YP_007434068.1|	-	7.5e-08	32.2	0.0	2.2e-07	30.6	0.0	1.8	2	0	0	2	2	2	1	von	Willebrand	factor	type	A	domain
VWA_CoxE	PF05762.9	gi|449066986|ref|YP_007434068.1|	-	1.3e-05	24.4	0.0	2.4e-05	23.6	0.0	1.5	1	0	0	1	1	1	1	VWA	domain	containing	CoxE-like	protein
LEDGF	PF11467.3	gi|449066986|ref|YP_007434068.1|	-	0.054	13.1	1.0	0.52	10.0	0.6	2.5	2	0	0	2	2	2	0	Lens	epithelium-derived	growth	factor	(LEDGF)
GHL1-3	PF11308.3	gi|449066986|ref|YP_007434068.1|	-	0.16	11.2	0.4	0.33	10.2	0.2	1.5	2	0	0	2	2	2	0	Glycosyl	hydrolases	related	to	GH101	family,	GHL1-GHL3
CCG	PF02754.11	gi|449066988|ref|YP_007434070.1|	-	6.2e-36	122.2	0.4	8e-19	67.4	0.1	2.2	2	0	0	2	2	2	2	Cysteine-rich	domain
Fer2_3	PF13085.1	gi|449066989|ref|YP_007434071.1|	-	2.7e-32	110.8	0.1	4.7e-32	110.0	0.0	1.4	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_8	PF13183.1	gi|449066989|ref|YP_007434071.1|	-	4.1e-12	45.9	3.4	4.1e-12	45.9	2.3	2.0	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|449066989|ref|YP_007434071.1|	-	2.7e-09	36.7	15.1	2.6e-08	33.5	3.9	2.4	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|449066989|ref|YP_007434071.1|	-	7.3e-08	32.5	13.7	1.2e-07	31.8	3.7	2.6	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|449066989|ref|YP_007434071.1|	-	1.8e-07	31.4	4.7	1.8e-07	31.4	3.2	2.5	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|449066989|ref|YP_007434071.1|	-	3e-07	30.6	12.2	3.1e-06	27.4	3.4	2.6	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|449066989|ref|YP_007434071.1|	-	5.4e-06	26.7	2.8	0.066	13.6	0.1	2.8	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|449066989|ref|YP_007434071.1|	-	3.4e-05	23.5	17.4	0.00019	21.1	0.9	3.1	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|449066989|ref|YP_007434071.1|	-	0.00029	20.5	18.1	0.0012	18.6	0.4	3.0	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4	PF00037.22	gi|449066989|ref|YP_007434071.1|	-	0.00056	19.4	20.0	0.0054	16.2	2.0	3.0	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|449066989|ref|YP_007434071.1|	-	0.0013	18.5	10.4	0.054	13.3	0.3	2.8	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|449066989|ref|YP_007434071.1|	-	0.0018	18.6	7.0	0.082	13.3	1.3	2.9	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_15	PF13459.1	gi|449066989|ref|YP_007434071.1|	-	0.002	18.6	4.9	0.13	12.8	0.6	2.7	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_20	PF14691.1	gi|449066989|ref|YP_007434071.1|	-	0.018	14.6	4.7	1.6	8.3	0.1	2.8	3	0	0	3	3	3	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer2	PF00111.22	gi|449066989|ref|YP_007434071.1|	-	0.089	12.5	0.5	0.089	12.5	0.3	2.4	2	1	1	3	3	3	0	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_4	PF12800.2	gi|449066989|ref|YP_007434071.1|	-	0.11	12.9	18.2	0.11	12.9	0.9	3.1	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|449066989|ref|YP_007434071.1|	-	0.22	12.3	16.1	0.4	11.4	8.6	3.0	2	1	2	4	4	4	0	4Fe-4S	double	cluster	binding	domain
FAD_binding_2	PF00890.19	gi|449066990|ref|YP_007434072.1|	-	1.8e-110	369.6	0.3	2.2e-110	369.3	0.2	1.1	1	0	0	1	1	1	1	FAD	binding	domain
Succ_DH_flav_C	PF02910.15	gi|449066990|ref|YP_007434072.1|	-	6.1e-45	152.2	0.1	9.3e-45	151.6	0.1	1.3	1	0	0	1	1	1	1	Fumarate	reductase	flavoprotein	C-term
DAO	PF01266.19	gi|449066990|ref|YP_007434072.1|	-	8.9e-10	37.9	0.6	1.1e-07	31.0	0.4	2.2	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.9	gi|449066990|ref|YP_007434072.1|	-	4.4e-05	23.4	0.9	0.00031	20.7	0.0	2.6	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|449066990|ref|YP_007434072.1|	-	5.6e-05	22.3	0.1	9.4e-05	21.6	0.1	1.3	1	0	0	1	1	1	1	FAD	binding	domain
NAD_binding_8	PF13450.1	gi|449066990|ref|YP_007434072.1|	-	8.2e-05	22.5	0.2	0.00033	20.6	0.1	2.1	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.9	gi|449066990|ref|YP_007434072.1|	-	0.00026	19.5	1.5	0.00056	18.4	0.6	1.8	2	0	0	2	2	2	1	HI0933-like	protein
Thi4	PF01946.12	gi|449066990|ref|YP_007434072.1|	-	0.0019	17.3	0.9	0.022	13.8	0.1	2.7	3	0	0	3	3	3	1	Thi4	family
GIDA	PF01134.17	gi|449066990|ref|YP_007434072.1|	-	0.0076	15.1	2.6	0.02	13.7	1.6	1.8	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
TMP-TENI	PF02581.12	gi|449066990|ref|YP_007434072.1|	-	0.067	12.2	0.1	0.12	11.4	0.1	1.4	1	0	0	1	1	1	0	Thiamine	monophosphate	synthase/TENI
Lycopene_cycl	PF05834.7	gi|449066990|ref|YP_007434072.1|	-	0.082	11.8	0.1	0.15	10.9	0.1	1.4	1	0	0	1	1	1	0	Lycopene	cyclase	protein
Hydrolase_6	PF13344.1	gi|449066991|ref|YP_007434073.1|	-	3.3e-23	81.4	0.0	7.2e-23	80.3	0.0	1.6	2	0	0	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|449066991|ref|YP_007434073.1|	-	1e-17	63.6	0.0	2.7e-17	62.2	0.0	1.8	1	0	0	1	1	1	1	HAD-hyrolase-like
Hydrolase	PF00702.21	gi|449066991|ref|YP_007434073.1|	-	6e-05	23.5	0.1	0.0013	19.1	0.1	2.5	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD_2	PF13419.1	gi|449066991|ref|YP_007434073.1|	-	0.0001	22.5	0.0	0.06	13.5	0.0	2.4	2	1	0	2	2	2	2	Haloacid	dehalogenase-like	hydrolase
DUF2070	PF09843.4	gi|449066993|ref|YP_007434075.1|	-	1.6e-33	115.6	0.0	2.2e-33	115.2	0.0	1.1	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2070)
DAO	PF01266.19	gi|449066994|ref|YP_007434076.1|	-	1e-13	50.9	0.0	7.3e-09	34.9	0.0	2.1	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|449066994|ref|YP_007434076.1|	-	9.9e-12	44.4	0.1	3.4e-06	26.1	0.0	2.2	1	1	1	2	2	2	2	FAD	binding	domain
Pyr_redox_2	PF07992.9	gi|449066994|ref|YP_007434076.1|	-	1e-08	35.2	0.0	1.8e-08	34.4	0.0	1.4	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|449066994|ref|YP_007434076.1|	-	9e-08	31.5	0.0	4.8e-05	22.5	0.0	2.6	3	0	0	3	3	3	2	FAD	binding	domain
FAD_oxidored	PF12831.2	gi|449066994|ref|YP_007434076.1|	-	2.1e-07	30.4	0.0	1.3e-06	27.8	0.0	2.0	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
GIDA	PF01134.17	gi|449066994|ref|YP_007434076.1|	-	2.2e-07	30.0	0.0	5.4e-07	28.8	0.0	1.6	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
NAD_binding_8	PF13450.1	gi|449066994|ref|YP_007434076.1|	-	4.4e-07	29.8	0.1	5.4e-06	26.3	0.0	2.4	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.12	gi|449066994|ref|YP_007434076.1|	-	3.6e-05	22.9	0.0	0.00023	20.3	0.0	2.1	1	1	0	1	1	1	1	Thi4	family
Trp_halogenase	PF04820.9	gi|449066994|ref|YP_007434076.1|	-	0.0001	21.1	0.0	0.017	13.7	0.0	2.3	3	0	0	3	3	3	2	Tryptophan	halogenase
Lycopene_cycl	PF05834.7	gi|449066994|ref|YP_007434076.1|	-	0.00049	19.1	0.0	0.00098	18.1	0.0	1.4	2	0	0	2	2	2	1	Lycopene	cyclase	protein
Pyr_redox	PF00070.22	gi|449066994|ref|YP_007434076.1|	-	0.0013	19.0	0.0	0.0039	17.5	0.0	1.9	2	0	0	2	2	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|449066994|ref|YP_007434076.1|	-	0.0017	16.8	0.0	0.0029	16.1	0.0	1.3	1	0	0	1	1	1	1	HI0933-like	protein
Pyr_redox_3	PF13738.1	gi|449066994|ref|YP_007434076.1|	-	0.0091	16.0	0.1	0.069	13.2	0.0	2.4	1	1	1	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
GDI	PF00996.13	gi|449066994|ref|YP_007434076.1|	-	0.021	13.1	0.0	0.036	12.3	0.0	1.4	1	0	0	1	1	1	0	GDP	dissociation	inhibitor
NAD_binding_7	PF13241.1	gi|449066994|ref|YP_007434076.1|	-	0.075	13.3	0.0	0.28	11.4	0.0	2.0	2	0	0	2	2	2	0	Putative	NAD(P)-binding
NAD_binding_9	PF13454.1	gi|449066994|ref|YP_007434076.1|	-	0.081	12.6	0.0	0.18	11.5	0.0	1.6	1	0	0	1	1	1	0	FAD-NAD(P)-binding
3HCDH_N	PF02737.13	gi|449066994|ref|YP_007434076.1|	-	0.15	11.6	0.0	0.27	10.8	0.0	1.4	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Metallophos_2	PF12850.2	gi|449066997|ref|YP_007434079.1|	-	4.2e-12	46.1	0.0	4.7e-12	46.0	0.0	1.0	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
DUF3529	PF12046.3	gi|449066997|ref|YP_007434079.1|	-	0.059	12.3	0.0	0.13	11.2	0.0	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3529)
MadL	PF03817.8	gi|449066998|ref|YP_007434080.1|	-	1.4	8.7	10.0	0.11	12.3	3.0	1.9	1	1	1	2	2	2	0	Malonate	transporter	MadL	subunit
Pyr_redox_2	PF07992.9	gi|449066999|ref|YP_007434081.1|	-	9.1e-06	25.6	0.1	1.9e-05	24.6	0.0	1.5	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|449066999|ref|YP_007434081.1|	-	4.7e-05	23.3	0.2	0.00013	21.8	0.0	1.8	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
DAO	PF01266.19	gi|449066999|ref|YP_007434081.1|	-	0.00034	19.6	0.0	0.0047	15.8	0.1	2.0	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
GIDA	PF01134.17	gi|449066999|ref|YP_007434081.1|	-	0.0035	16.2	0.0	0.0074	15.1	0.0	1.5	1	1	0	1	1	1	1	Glucose	inhibited	division	protein	A
FAD_binding_3	PF01494.14	gi|449066999|ref|YP_007434081.1|	-	0.0072	15.4	0.0	0.011	14.8	0.0	1.2	1	0	0	1	1	1	1	FAD	binding	domain
HI0933_like	PF03486.9	gi|449066999|ref|YP_007434081.1|	-	0.018	13.5	0.0	0.03	12.7	0.0	1.3	1	0	0	1	1	1	0	HI0933-like	protein
Lycopene_cycl	PF05834.7	gi|449066999|ref|YP_007434081.1|	-	0.019	13.9	0.0	0.1	11.4	0.0	2.0	3	0	0	3	3	3	0	Lycopene	cyclase	protein
Thi4	PF01946.12	gi|449066999|ref|YP_007434081.1|	-	0.027	13.5	0.1	1.6	7.7	0.0	2.7	3	0	0	3	3	3	0	Thi4	family
Pyr_redox	PF00070.22	gi|449066999|ref|YP_007434081.1|	-	0.048	14.0	0.0	0.18	12.2	0.0	2.0	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|449066999|ref|YP_007434081.1|	-	0.09	12.8	0.1	0.24	11.4	0.1	1.7	1	1	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
HTH_AsnC-type	PF13404.1	gi|449067000|ref|YP_007434082.1|	-	2e-18	65.6	0.3	3.7e-18	64.7	0.2	1.5	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_24	PF13412.1	gi|449067000|ref|YP_007434082.1|	-	4.3e-18	64.4	0.8	8.8e-18	63.4	0.6	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
AsnC_trans_reg	PF01037.16	gi|449067000|ref|YP_007434082.1|	-	1.5e-15	56.6	0.1	2.2e-15	56.1	0.1	1.3	1	0	0	1	1	1	1	AsnC	family
HTH_11	PF08279.7	gi|449067000|ref|YP_007434082.1|	-	4.7e-07	29.3	0.3	1.1e-06	28.1	0.0	1.8	2	0	0	2	2	1	1	HTH	domain
HTH_Mga	PF08280.6	gi|449067000|ref|YP_007434082.1|	-	0.00016	21.3	0.0	0.00032	20.3	0.0	1.5	1	0	0	1	1	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
MarR_2	PF12802.2	gi|449067000|ref|YP_007434082.1|	-	0.00019	20.9	0.0	0.00044	19.8	0.0	1.5	1	0	0	1	1	1	1	MarR	family
Sigma70_r4	PF04545.11	gi|449067000|ref|YP_007434082.1|	-	0.00032	19.9	0.6	0.0083	15.4	0.0	2.9	2	1	1	3	3	3	1	Sigma-70,	region	4
MarR	PF01047.17	gi|449067000|ref|YP_007434082.1|	-	0.00032	20.3	0.3	0.0014	18.2	0.1	2.0	2	1	0	3	3	2	1	MarR	family
HTH_5	PF01022.15	gi|449067000|ref|YP_007434082.1|	-	0.00034	20.2	0.0	0.00073	19.1	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_Tnp_ISL3	PF13542.1	gi|449067000|ref|YP_007434082.1|	-	0.0012	17.9	0.0	0.0024	16.9	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_20	PF12840.2	gi|449067000|ref|YP_007434082.1|	-	0.0018	18.0	0.0	0.0043	16.8	0.0	1.6	2	0	0	2	2	1	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|449067000|ref|YP_007434082.1|	-	0.0018	17.8	0.0	0.0098	15.5	0.0	2.0	2	0	0	2	2	2	1	Homeodomain-like	domain
HTH_27	PF13463.1	gi|449067000|ref|YP_007434082.1|	-	0.0033	17.6	0.0	0.0088	16.3	0.0	1.7	2	0	0	2	2	1	1	Winged	helix	DNA-binding	domain
HTH_34	PF13601.1	gi|449067000|ref|YP_007434082.1|	-	0.0043	17.0	0.0	0.0086	16.0	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|449067000|ref|YP_007434082.1|	-	0.0055	16.3	0.0	0.012	15.3	0.0	1.7	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
NapD	PF03927.8	gi|449067000|ref|YP_007434082.1|	-	0.0081	15.9	0.0	0.015	15.1	0.0	1.4	1	0	0	1	1	1	1	NapD	protein
ACT_4	PF13291.1	gi|449067000|ref|YP_007434082.1|	-	0.0082	16.4	0.0	0.097	13.0	0.0	2.4	2	0	0	2	2	2	1	ACT	domain
GerE	PF00196.14	gi|449067000|ref|YP_007434082.1|	-	0.012	14.9	0.7	0.038	13.3	0.1	2.0	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
Sigma70_r4_2	PF08281.7	gi|449067000|ref|YP_007434082.1|	-	0.012	15.0	0.2	0.046	13.1	0.1	2.0	2	0	0	2	2	2	0	Sigma-70,	region	4
HTH_10	PF04967.7	gi|449067000|ref|YP_007434082.1|	-	0.014	14.9	0.2	0.069	12.7	0.0	2.2	2	1	0	2	2	2	0	HTH	DNA	binding	domain
HTH_IclR	PF09339.5	gi|449067000|ref|YP_007434082.1|	-	0.019	14.5	0.0	0.033	13.7	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|449067000|ref|YP_007434082.1|	-	0.024	14.5	0.1	0.064	13.1	0.0	1.7	2	0	0	2	2	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
LexA_DNA_bind	PF01726.11	gi|449067000|ref|YP_007434082.1|	-	0.028	13.9	0.0	0.061	12.8	0.0	1.6	1	0	0	1	1	1	0	LexA	DNA	binding	domain
Mga	PF05043.8	gi|449067000|ref|YP_007434082.1|	-	0.042	14.1	0.0	0.093	13.0	0.0	1.5	1	0	0	1	1	1	0	Mga	helix-turn-helix	domain
NTPase_1	PF03266.10	gi|449067000|ref|YP_007434082.1|	-	0.043	13.5	0.3	0.13	11.9	0.2	2.0	1	1	0	1	1	1	0	NTPase
HTH_38	PF13936.1	gi|449067000|ref|YP_007434082.1|	-	0.047	13.2	0.2	0.097	12.2	0.1	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|449067000|ref|YP_007434082.1|	-	0.051	13.6	0.2	0.38	10.9	0.0	2.2	3	0	0	3	3	2	0	Transcriptional	regulator
HTH_Crp_2	PF13545.1	gi|449067000|ref|YP_007434082.1|	-	0.068	12.9	0.0	0.36	10.6	0.0	2.0	2	1	0	2	2	2	0	Crp-like	helix-turn-helix	domain
Penicillinase_R	PF03965.11	gi|449067000|ref|YP_007434082.1|	-	0.074	13.1	0.0	0.16	12.0	0.0	1.5	1	0	0	1	1	1	0	Penicillinase	repressor
DUF493	PF04359.9	gi|449067000|ref|YP_007434082.1|	-	0.082	13.2	0.1	0.16	12.3	0.0	1.6	2	0	0	2	2	1	0	Protein	of	unknown	function	(DUF493)
MIase	PF02426.11	gi|449067000|ref|YP_007434082.1|	-	0.086	12.6	0.0	0.14	11.9	0.0	1.4	1	0	0	1	1	1	0	Muconolactone	delta-isomerase
HTH_29	PF13551.1	gi|449067000|ref|YP_007434082.1|	-	0.09	12.9	0.0	0.17	12.0	0.0	1.4	1	0	0	1	1	1	0	Winged	helix-turn	helix
HTH_36	PF13730.1	gi|449067000|ref|YP_007434082.1|	-	0.092	12.8	0.0	0.24	11.5	0.0	1.8	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_1	PF00126.22	gi|449067000|ref|YP_007434082.1|	-	0.098	12.4	0.0	0.18	11.5	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
Myb_DNA-bind_6	PF13921.1	gi|449067000|ref|YP_007434082.1|	-	0.14	12.2	0.0	0.29	11.2	0.0	1.5	1	0	0	1	1	1	0	Myb-like	DNA-binding	domain
HTH_40	PF14493.1	gi|449067000|ref|YP_007434082.1|	-	0.15	12.3	0.7	0.68	10.1	0.5	2.3	1	1	0	1	1	1	0	Helix-turn-helix	domain
RimK	PF08443.6	gi|449067001|ref|YP_007434083.1|	-	4.9e-38	130.5	0.0	5.8e-38	130.2	0.0	1.0	1	0	0	1	1	1	1	RimK-like	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|449067001|ref|YP_007434083.1|	-	1.6e-12	47.5	0.0	1.9e-12	47.2	0.0	1.1	1	0	0	1	1	1	1	ATP-grasp	domain
GSH-S_ATP	PF02955.11	gi|449067001|ref|YP_007434083.1|	-	4.1e-12	45.5	0.1	1.2e-11	44.1	0.1	1.6	1	1	1	2	2	2	1	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|449067001|ref|YP_007434083.1|	-	5.3e-11	41.8	0.0	5e-10	38.6	0.0	1.9	1	1	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp_3	PF02655.9	gi|449067001|ref|YP_007434083.1|	-	1.7e-08	34.4	0.1	2.5e-08	33.9	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	domain
Synapsin_C	PF02750.9	gi|449067001|ref|YP_007434083.1|	-	7.6e-05	21.8	0.0	8.5e-05	21.7	0.0	1.1	1	0	0	1	1	1	1	Synapsin,	ATP	binding	domain
ATPgrasp_YheCD	PF14398.1	gi|449067001|ref|YP_007434083.1|	-	0.0005	18.9	0.0	0.24	10.1	0.0	2.2	2	0	0	2	2	2	2	YheC/D	like	ATP-grasp
Ins134_P3_kin	PF05770.6	gi|449067001|ref|YP_007434083.1|	-	0.0046	16.0	0.0	0.35	9.8	0.0	2.1	1	1	1	2	2	2	2	Inositol	1,	3,	4-trisphosphate	5/6-kinase
DUF4343	PF14243.1	gi|449067001|ref|YP_007434083.1|	-	0.041	13.7	0.0	0.077	12.8	0.0	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4343)
CP_ATPgrasp_1	PF04174.8	gi|449067001|ref|YP_007434083.1|	-	0.099	11.2	0.0	2	6.9	0.0	2.0	2	0	0	2	2	2	0	A	circularly	permuted	ATPgrasp
CPSase_L_D2	PF02786.12	gi|449067001|ref|YP_007434083.1|	-	0.12	11.6	0.0	0.27	10.4	0.0	1.6	1	1	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
polyprenyl_synt	PF00348.12	gi|449067002|ref|YP_007434084.1|	-	5e-33	114.0	0.1	7.9e-33	113.4	0.1	1.2	1	0	0	1	1	1	1	Polyprenyl	synthetase
DUF4335	PF14233.1	gi|449067002|ref|YP_007434084.1|	-	0.022	14.2	0.0	0.05	13.0	0.0	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4335)
DUF4252	PF14060.1	gi|449067003|ref|YP_007434085.1|	-	0.039	13.5	0.1	0.077	12.5	0.1	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4252)
PNP_UDP_1	PF01048.15	gi|449067004|ref|YP_007434086.1|	-	2.2e-46	157.7	0.0	2.5e-46	157.5	0.0	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
Pribosyltran	PF00156.22	gi|449067005|ref|YP_007434087.1|	-	4.2e-21	74.9	0.3	5.9e-21	74.4	0.2	1.2	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.1	gi|449067005|ref|YP_007434087.1|	-	0.00069	18.8	0.0	0.00095	18.4	0.0	1.1	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
eRF1_2	PF03464.10	gi|449067006|ref|YP_007434088.1|	-	2.1e-39	134.8	0.0	3.8e-39	134.0	0.0	1.4	1	0	0	1	1	1	1	eRF1	domain	2
eRF1_3	PF03465.10	gi|449067006|ref|YP_007434088.1|	-	5.1e-21	75.0	3.5	2.6e-20	72.7	0.8	2.8	2	2	0	2	2	2	1	eRF1	domain	3
eRF1_1	PF03463.10	gi|449067006|ref|YP_007434088.1|	-	1.8e-11	43.6	0.0	5e-11	42.3	0.0	1.8	1	0	0	1	1	1	1	eRF1	domain	1
SSV1_ORF_D-335	PF07935.6	gi|449067007|ref|YP_007434089.1|	-	6.2e-25	86.7	2.9	7.4e-25	86.4	2.0	1.0	1	0	0	1	1	1	1	ORF	D-335-like	protein
BH4	PF02180.12	gi|449067007|ref|YP_007434089.1|	-	1.3	8.5	8.0	2.8	7.4	0.5	2.4	2	0	0	2	2	2	0	Bcl-2	homology	region	4
DUF4190	PF13828.1	gi|449067010|ref|YP_007434092.1|	-	0.018	14.6	6.7	0.018	14.6	4.6	3.8	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4190)
DUF997	PF06196.7	gi|449067010|ref|YP_007434092.1|	-	1.1	8.7	6.4	0.65	9.5	0.2	2.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF997)
PadR	PF03551.9	gi|449067012|ref|YP_007434094.1|	-	1.1e-10	41.1	0.1	3.1e-10	39.6	0.0	1.8	2	0	0	2	2	2	1	Transcriptional	regulator	PadR-like	family
HTH_45	PF14947.1	gi|449067012|ref|YP_007434094.1|	-	0.00049	19.8	0.2	0.003	17.3	0.0	2.2	2	0	0	2	2	2	1	Winged	helix-turn-helix
HTH_12	PF08461.5	gi|449067012|ref|YP_007434094.1|	-	0.065	12.9	0.6	0.49	10.1	0.0	2.2	2	0	0	2	2	2	0	Ribonuclease	R	winged-helix	domain
HTH_27	PF13463.1	gi|449067012|ref|YP_007434094.1|	-	0.092	13.0	0.1	0.29	11.4	0.0	2.0	2	1	0	2	2	2	0	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|449067012|ref|YP_007434094.1|	-	0.12	12.1	0.6	0.63	9.7	0.0	2.3	2	1	0	3	3	3	0	Sugar-specific	transcriptional	regulator	TrmB
Cecropin	PF00272.14	gi|449067012|ref|YP_007434094.1|	-	0.17	11.4	2.3	0.27	10.7	0.1	2.2	2	0	0	2	2	2	0	Cecropin	family
ABC_tran	PF00005.22	gi|449067013|ref|YP_007434095.1|	-	3.5e-16	59.7	0.0	5.9e-16	59.0	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|449067013|ref|YP_007434095.1|	-	3.6e-10	40.2	0.0	6.1e-10	39.5	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
DUF4162	PF13732.1	gi|449067013|ref|YP_007434095.1|	-	4.7e-09	36.6	0.2	8.3e-09	35.8	0.2	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4162)
AAA_15	PF13175.1	gi|449067013|ref|YP_007434095.1|	-	0.00022	20.4	0.0	0.00039	19.5	0.0	1.3	1	0	0	1	1	1	1	AAA	ATPase	domain
ABC2_membrane	PF01061.19	gi|449067014|ref|YP_007434096.1|	-	5.5e-36	123.7	20.2	5.5e-36	123.7	14.0	2.0	2	0	0	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.2	gi|449067014|ref|YP_007434096.1|	-	1.7e-20	73.3	27.3	1.7e-20	73.3	18.9	1.7	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|449067014|ref|YP_007434096.1|	-	2.4e-11	43.2	28.2	3.5e-11	42.7	19.6	1.2	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.2	gi|449067014|ref|YP_007434096.1|	-	6.1e-11	41.7	20.8	7.3e-11	41.4	14.4	1.1	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_5	PF13346.1	gi|449067014|ref|YP_007434096.1|	-	0.084	12.1	24.4	0.02	14.1	13.7	2.2	2	1	0	2	2	2	0	ABC-2	family	transporter	protein
Ald_Xan_dh_C2	PF02738.13	gi|449067015|ref|YP_007434097.1|	-	1.8e-123	412.7	0.0	3.3e-123	411.9	0.0	1.4	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|449067015|ref|YP_007434097.1|	-	2.1e-17	63.2	0.0	1.6e-14	53.9	0.0	2.6	1	1	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
DUF1947	PF09183.5	gi|449067016|ref|YP_007434098.1|	-	2.4e-30	104.0	1.3	4.4e-30	103.2	0.9	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1947)
PUA	PF01472.15	gi|449067016|ref|YP_007434098.1|	-	4.3e-14	51.9	0.4	6.6e-14	51.3	0.3	1.3	1	0	0	1	1	1	1	PUA	domain
Glycos_transf_2	PF00535.21	gi|449067017|ref|YP_007434099.1|	-	3e-23	82.3	0.1	4.4e-23	81.7	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|449067017|ref|YP_007434099.1|	-	0.004	16.9	0.0	0.0047	16.7	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.1	gi|449067017|ref|YP_007434099.1|	-	0.063	13.6	0.0	0.11	12.8	0.0	1.5	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.4	gi|449067017|ref|YP_007434099.1|	-	0.072	12.1	0.1	0.11	11.5	0.0	1.3	1	0	0	1	1	1	0	Glycosyltransferase	like	family	2
HTH_24	PF13412.1	gi|449067018|ref|YP_007434100.1|	-	8.7e-06	25.0	0.2	1.7e-05	24.1	0.2	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|449067018|ref|YP_007434100.1|	-	8.7e-05	22.0	0.3	0.00025	20.6	0.1	1.9	2	1	0	2	2	2	1	HTH	domain
Med9	PF07544.8	gi|449067018|ref|YP_007434100.1|	-	0.00023	20.8	0.8	0.0014	18.3	0.3	2.0	2	0	0	2	2	2	1	RNA	polymerase	II	transcription	mediator	complex	subunit	9
DUF1875	PF08961.5	gi|449067018|ref|YP_007434100.1|	-	0.0013	18.1	1.7	0.0015	17.8	1.2	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1875)
FeoC	PF09012.5	gi|449067018|ref|YP_007434100.1|	-	0.0013	18.3	0.0	0.0036	16.9	0.0	1.6	1	1	1	2	2	2	1	FeoC	like	transcriptional	regulator
MarR	PF01047.17	gi|449067018|ref|YP_007434100.1|	-	0.0027	17.3	0.1	0.014	15.1	0.0	1.9	2	0	0	2	2	2	1	MarR	family
Prefoldin_2	PF01920.15	gi|449067018|ref|YP_007434100.1|	-	0.0049	16.6	3.8	0.0079	15.9	2.7	1.4	1	0	0	1	1	1	1	Prefoldin	subunit
MarR_2	PF12802.2	gi|449067018|ref|YP_007434100.1|	-	0.0053	16.4	0.0	0.0069	16.0	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_IclR	PF09339.5	gi|449067018|ref|YP_007434100.1|	-	0.0053	16.3	0.0	0.0081	15.7	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
Fmp27_WPPW	PF10359.4	gi|449067018|ref|YP_007434100.1|	-	0.0066	14.9	0.6	0.0079	14.6	0.4	1.1	1	0	0	1	1	1	1	RNA	pol	II	promoter	Fmp27	protein	domain
DivIC	PF04977.10	gi|449067018|ref|YP_007434100.1|	-	0.0071	15.8	2.2	0.0095	15.4	0.3	1.9	1	1	0	2	2	2	1	Septum	formation	initiator
TPR_MLP1_2	PF07926.7	gi|449067018|ref|YP_007434100.1|	-	0.0094	15.6	0.8	0.047	13.4	0.7	1.8	2	0	0	2	2	2	1	TPR/MLP1/MLP2-like	protein
Bap31	PF05529.7	gi|449067018|ref|YP_007434100.1|	-	0.0098	15.3	0.5	0.0099	15.3	0.4	1.1	1	0	0	1	1	1	1	B-cell	receptor-associated	protein	31-like
HTH_DeoR	PF08220.7	gi|449067018|ref|YP_007434100.1|	-	0.015	14.7	0.0	0.029	13.9	0.0	1.4	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
LexA_DNA_bind	PF01726.11	gi|449067018|ref|YP_007434100.1|	-	0.017	14.6	0.0	0.04	13.4	0.0	1.6	1	1	0	1	1	1	0	LexA	DNA	binding	domain
FlaC_arch	PF05377.6	gi|449067018|ref|YP_007434100.1|	-	0.019	14.8	0.3	0.034	14.0	0.2	1.5	1	0	0	1	1	1	0	Flagella	accessory	protein	C	(FlaC)
DUF1319	PF07028.6	gi|449067018|ref|YP_007434100.1|	-	0.026	14.7	0.3	0.037	14.2	0.2	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1319)
DUF465	PF04325.8	gi|449067018|ref|YP_007434100.1|	-	0.026	14.2	0.3	0.081	12.6	0.2	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF465)
SlyX	PF04102.7	gi|449067018|ref|YP_007434100.1|	-	0.035	14.4	0.0	0.074	13.4	0.0	1.6	1	0	0	1	1	1	0	SlyX
TrmB	PF01978.14	gi|449067018|ref|YP_007434100.1|	-	0.037	13.7	0.1	0.08	12.6	0.1	1.6	1	1	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
Pox_A_type_inc	PF04508.7	gi|449067018|ref|YP_007434100.1|	-	0.05	13.4	2.0	0.43	10.4	0.1	3.0	3	0	0	3	3	3	0	Viral	A-type	inclusion	protein	repeat
HALZ	PF02183.13	gi|449067018|ref|YP_007434100.1|	-	0.059	13.0	1.2	0.099	12.3	0.1	1.9	2	0	0	2	2	2	0	Homeobox	associated	leucine	zipper
Fe_dep_repress	PF01325.14	gi|449067018|ref|YP_007434100.1|	-	0.06	13.2	0.0	0.099	12.5	0.0	1.3	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_5	PF01022.15	gi|449067018|ref|YP_007434100.1|	-	0.075	12.7	0.0	0.15	11.7	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
Rrf2	PF02082.15	gi|449067018|ref|YP_007434100.1|	-	0.079	13.0	0.0	0.14	12.2	0.0	1.5	1	1	0	1	1	1	0	Transcriptional	regulator
USP8_interact	PF08941.5	gi|449067018|ref|YP_007434100.1|	-	0.099	11.9	0.2	0.14	11.5	0.2	1.2	1	0	0	1	1	1	0	USP8	interacting
G-gamma	PF00631.17	gi|449067018|ref|YP_007434100.1|	-	0.12	12.1	0.5	0.24	11.1	0.2	1.6	1	1	0	1	1	1	0	GGL	domain
TMF_DNA_bd	PF12329.3	gi|449067018|ref|YP_007434100.1|	-	0.19	11.5	2.7	0.32	10.8	1.8	1.5	1	0	0	1	1	1	0	TATA	element	modulatory	factor	1	DNA	binding
IATP	PF04568.7	gi|449067018|ref|YP_007434100.1|	-	0.19	11.7	1.6	0.34	10.9	1.1	1.4	1	0	0	1	1	1	0	Mitochondrial	ATPase	inhibitor,	IATP
Cep57_CLD_2	PF14197.1	gi|449067018|ref|YP_007434100.1|	-	1.1	9.2	3.7	3.4	7.6	2.5	1.8	1	1	0	1	1	1	0	Centrosome	localisation	domain	of	PPC89
bZIP_1	PF00170.16	gi|449067018|ref|YP_007434100.1|	-	1.1	9.2	4.2	0.98	9.4	0.6	2.2	1	1	1	2	2	2	0	bZIP	transcription	factor
OCD_Mu_crystall	PF02423.10	gi|449067019|ref|YP_007434101.1|	-	4.1e-44	150.6	0.0	4.6e-43	147.1	0.0	1.9	1	1	0	1	1	1	1	Ornithine	cyclodeaminase/mu-crystallin	family
Shikimate_DH	PF01488.15	gi|449067019|ref|YP_007434101.1|	-	7.8e-06	26.0	0.1	1.8e-05	24.8	0.0	1.6	1	1	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
GFO_IDH_MocA	PF01408.17	gi|449067019|ref|YP_007434101.1|	-	0.0019	18.6	0.0	0.0061	17.0	0.0	1.8	1	1	1	2	2	2	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
NAD_binding_2	PF03446.10	gi|449067019|ref|YP_007434101.1|	-	0.0037	17.1	0.0	0.0057	16.5	0.0	1.4	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
IlvN	PF07991.7	gi|449067019|ref|YP_007434101.1|	-	0.0051	16.1	0.1	0.01	15.2	0.1	1.4	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
NmrA	PF05368.8	gi|449067019|ref|YP_007434101.1|	-	0.028	13.6	0.0	0.048	12.9	0.0	1.3	1	0	0	1	1	1	0	NmrA-like	family
F420_oxidored	PF03807.12	gi|449067019|ref|YP_007434101.1|	-	0.042	14.2	0.1	0.33	11.4	0.0	2.1	2	0	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
Aminotran_1_2	PF00155.16	gi|449067020|ref|YP_007434102.1|	-	2.3e-28	99.2	0.0	2.6e-28	99.0	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_MocR	PF12897.2	gi|449067020|ref|YP_007434102.1|	-	5.7e-10	38.3	0.0	8.7e-10	37.7	0.0	1.2	1	0	0	1	1	1	1	Alanine-glyoxylate	amino-transferase
DUF1126	PF06565.7	gi|449067020|ref|YP_007434102.1|	-	0.05	13.0	0.0	0.1	12.1	0.0	1.5	1	0	0	1	1	1	0	Repeat	of	unknown	function	(DUF1126)
Peptidase_M24	PF00557.19	gi|449067021|ref|YP_007434103.1|	-	9.2e-55	185.4	0.1	1.6e-54	184.6	0.1	1.4	2	0	0	2	2	2	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.13	gi|449067021|ref|YP_007434103.1|	-	3.2e-19	69.7	0.0	6.6e-19	68.7	0.0	1.6	1	0	0	1	1	1	1	Creatinase/Prolidase	N-terminal	domain
Hist_deacetyl	PF00850.14	gi|449067022|ref|YP_007434104.1|	-	1.1e-62	212.0	0.0	1.4e-62	211.8	0.0	1.1	1	0	0	1	1	1	1	Histone	deacetylase	domain
PmbA_TldD	PF01523.11	gi|449067023|ref|YP_007434105.1|	-	4.3e-46	157.5	0.8	5.7e-46	157.1	0.5	1.2	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
PmbA_TldD	PF01523.11	gi|449067024|ref|YP_007434106.1|	-	6.7e-32	110.9	1.2	1e-31	110.3	0.8	1.3	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
Sm_multidrug_ex	PF06695.6	gi|449067025|ref|YP_007434107.1|	-	1.9e-09	37.7	4.1	2.9e-09	37.1	2.9	1.3	1	0	0	1	1	1	1	Putative	small	multi-drug	export	protein
Herpes_UL73	PF03554.8	gi|449067025|ref|YP_007434107.1|	-	0.059	13.1	0.4	0.059	13.1	0.3	1.7	1	1	1	2	2	2	0	UL73	viral	envelope	glycoprotein
Ald_Xan_dh_C2	PF02738.13	gi|449067026|ref|YP_007434108.1|	-	3.6e-94	316.0	0.0	3.6e-75	253.3	0.0	2.1	1	1	1	2	2	2	2	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|449067026|ref|YP_007434108.1|	-	5.3e-12	45.7	0.0	1.3e-11	44.5	0.0	1.7	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
XdhC_C	PF13478.1	gi|449067027|ref|YP_007434109.1|	-	3.3e-26	92.2	0.0	7.9e-26	90.9	0.0	1.5	2	0	0	2	2	2	1	XdhC	Rossmann	domain
Pyr_redox	PF00070.22	gi|449067027|ref|YP_007434109.1|	-	0.002	18.4	0.3	3.2	8.2	0.0	2.4	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
2-Hacid_dh_C	PF02826.14	gi|449067027|ref|YP_007434109.1|	-	0.11	11.6	0.0	0.16	11.0	0.0	1.2	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
SapB_1	PF05184.10	gi|449067028|ref|YP_007434110.1|	-	0.082	12.7	1.2	0.082	12.7	0.8	2.1	2	0	0	2	2	2	0	Saposin-like	type	B,	region	1
PALP	PF00291.20	gi|449067029|ref|YP_007434111.1|	-	4.8e-57	193.5	0.0	5.6e-57	193.2	0.0	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
DFP	PF04127.10	gi|449067029|ref|YP_007434111.1|	-	0.079	12.5	0.2	0.15	11.6	0.1	1.4	1	0	0	1	1	1	0	DNA	/	pantothenate	metabolism	flavoprotein
zinc_ribbon_5	PF13719.1	gi|449067029|ref|YP_007434111.1|	-	0.13	11.9	5.4	1.7	8.2	0.1	2.9	3	0	0	3	3	3	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|449067029|ref|YP_007434111.1|	-	0.14	11.8	4.7	3.8	7.2	0.1	2.9	3	0	0	3	3	3	0	zinc-ribbon	domain
HypA	PF01155.14	gi|449067029|ref|YP_007434111.1|	-	0.19	11.4	2.1	2	8.1	0.5	2.4	2	0	0	2	2	2	0	Hydrogenase	expression/synthesis	hypA	family
zf-ribbon_3	PF13248.1	gi|449067029|ref|YP_007434111.1|	-	0.37	10.0	2.1	0.95	8.7	1.5	1.7	1	1	0	1	1	1	0	zinc-ribbon	domain
CpXC	PF14353.1	gi|449067029|ref|YP_007434111.1|	-	0.38	10.7	1.6	0.78	9.7	0.0	2.1	1	1	1	2	2	2	0	CpXC	protein
Zn-ribbon_8	PF09723.5	gi|449067029|ref|YP_007434111.1|	-	0.63	10.0	5.0	5.8	6.9	0.2	2.4	1	1	1	2	2	2	0	Zinc	ribbon	domain
Trypsin_2	PF13365.1	gi|449067030|ref|YP_007434112.1|	-	6.9e-18	64.7	0.9	1.1e-17	64.1	0.6	1.3	1	0	0	1	1	1	1	Trypsin-like	peptidase	domain
PDZ_2	PF13180.1	gi|449067030|ref|YP_007434112.1|	-	2e-14	53.2	0.2	4.3e-14	52.1	0.1	1.5	1	0	0	1	1	1	1	PDZ	domain
Trypsin	PF00089.21	gi|449067030|ref|YP_007434112.1|	-	6.2e-11	42.3	0.0	1e-10	41.5	0.0	1.3	1	0	0	1	1	1	1	Trypsin
PDZ	PF00595.19	gi|449067030|ref|YP_007434112.1|	-	3.1e-07	30.4	0.1	7e-07	29.3	0.1	1.7	1	0	0	1	1	1	1	PDZ	domain	(Also	known	as	DHR	or	GLGF)
Tricorn_PDZ	PF14685.1	gi|449067030|ref|YP_007434112.1|	-	0.00021	20.9	0.0	0.00053	19.7	0.0	1.7	1	0	0	1	1	1	1	Tricorn	protease	PDZ	domain
GRASP55_65	PF04495.9	gi|449067030|ref|YP_007434112.1|	-	0.0019	18.1	0.0	0.0041	17.1	0.0	1.5	1	0	0	1	1	1	1	GRASP55/65	PDZ-like	domain
Peptidase_S46	PF10459.4	gi|449067030|ref|YP_007434112.1|	-	0.027	12.9	1.0	0.042	12.2	0.3	1.5	2	0	0	2	2	2	0	Peptidase	S46
Peptidase_S7	PF00949.16	gi|449067030|ref|YP_007434112.1|	-	0.037	13.4	0.4	0.097	12.0	0.2	1.8	2	0	0	2	2	2	0	Peptidase	S7,	Flavivirus	NS3	serine	protease
Peptidase_S32	PF05579.8	gi|449067030|ref|YP_007434112.1|	-	0.045	12.7	0.1	0.58	9.0	0.0	2.2	2	0	0	2	2	2	0	Equine	arteritis	virus	serine	endopeptidase	S32
Peptidase_S29	PF02907.10	gi|449067030|ref|YP_007434112.1|	-	0.085	12.3	0.2	0.24	10.9	0.0	1.8	2	0	0	2	2	2	0	Hepatitis	C	virus	NS3	protease
PAP2	PF01569.16	gi|449067031|ref|YP_007434113.1|	-	5e-24	84.4	3.3	5e-24	84.4	2.3	2.0	2	0	0	2	2	2	1	PAP2	superfamily
PAP2_C	PF14360.1	gi|449067031|ref|YP_007434113.1|	-	0.019	15.2	2.3	0.019	15.2	1.6	2.9	3	1	0	3	3	3	0	PAP2	superfamily	C-terminal
PAP2_3	PF14378.1	gi|449067031|ref|YP_007434113.1|	-	0.031	13.8	5.7	0.16	11.5	3.9	2.1	1	1	0	1	1	1	0	PAP2	superfamily
Tic20	PF09685.5	gi|449067032|ref|YP_007434114.1|	-	0.0096	15.8	2.5	0.0096	15.8	1.7	2.1	2	0	0	2	2	2	1	Tic20-like	protein
DUF2542	PF10808.3	gi|449067032|ref|YP_007434114.1|	-	0.42	10.9	3.4	1.3	9.3	0.1	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2542)
DUF3592	PF12158.3	gi|449067032|ref|YP_007434114.1|	-	1.1	9.0	4.4	25	4.6	3.1	2.1	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3592)
TMEM51	PF15345.1	gi|449067032|ref|YP_007434114.1|	-	1.4	8.5	5.1	2.4	7.8	0.0	2.2	2	0	0	2	2	2	0	Transmembrane	protein	51
DUF3188	PF11384.3	gi|449067032|ref|YP_007434114.1|	-	8.9	5.9	12.9	2.2	7.9	2.3	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3188)
ABC_tran	PF00005.22	gi|449067033|ref|YP_007434115.1|	-	2.4e-25	89.4	0.0	4.9e-25	88.4	0.0	1.5	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|449067033|ref|YP_007434115.1|	-	5e-11	43.0	0.0	2.2e-05	24.6	0.0	2.6	1	1	1	3	3	3	2	AAA	domain
AAA_10	PF12846.2	gi|449067033|ref|YP_007434115.1|	-	0.015	14.7	0.5	0.092	12.1	0.0	2.1	2	0	0	2	2	2	0	AAA-like	domain
AAA_15	PF13175.1	gi|449067033|ref|YP_007434115.1|	-	0.021	13.9	0.1	0.037	13.0	0.0	1.5	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_23	PF13476.1	gi|449067033|ref|YP_007434115.1|	-	0.071	13.4	1.8	0.12	12.6	1.0	1.8	1	1	0	1	1	1	0	AAA	domain
AAA_33	PF13671.1	gi|449067033|ref|YP_007434115.1|	-	0.12	12.2	0.0	1	9.2	0.0	2.1	1	1	0	1	1	1	0	AAA	domain
Aminotran_3	PF00202.16	gi|449067034|ref|YP_007434116.1|	-	1.6e-87	293.5	0.0	1.9e-87	293.3	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
Aminotran_1_2	PF00155.16	gi|449067034|ref|YP_007434116.1|	-	0.045	12.6	0.0	3.1	6.6	0.0	2.1	2	0	0	2	2	2	0	Aminotransferase	class	I	and	II
Methyltransf_11	PF08241.7	gi|449067036|ref|YP_007434118.1|	-	4.2e-18	65.6	0.1	5.5e-18	65.2	0.1	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|449067036|ref|YP_007434118.1|	-	5.6e-15	55.2	0.2	6.6e-15	55.0	0.2	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|449067036|ref|YP_007434118.1|	-	4.5e-14	52.4	0.0	5.5e-14	52.2	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|449067036|ref|YP_007434118.1|	-	8.8e-11	42.1	0.1	1.3e-10	41.6	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|449067036|ref|YP_007434118.1|	-	3.8e-10	40.0	0.1	6e-10	39.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|449067036|ref|YP_007434118.1|	-	1.7e-08	34.4	0.0	2.2e-08	34.1	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|449067036|ref|YP_007434118.1|	-	2.4e-08	34.5	0.2	3.4e-08	34.0	0.1	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|449067036|ref|YP_007434118.1|	-	3.3e-08	33.0	0.0	3.9e-08	32.8	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	small	domain
Ubie_methyltran	PF01209.13	gi|449067036|ref|YP_007434118.1|	-	5.2e-07	29.0	0.0	6.2e-07	28.7	0.0	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
PrmA	PF06325.8	gi|449067036|ref|YP_007434118.1|	-	0.00012	21.3	0.0	0.00015	21.0	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_8	PF05148.10	gi|449067036|ref|YP_007434118.1|	-	0.00027	20.6	0.4	0.00044	19.9	0.3	1.3	1	0	0	1	1	1	1	Hypothetical	methyltransferase
NodS	PF05401.6	gi|449067036|ref|YP_007434118.1|	-	0.00041	19.8	0.1	0.00052	19.4	0.0	1.1	1	0	0	1	1	1	1	Nodulation	protein	S	(NodS)
MetW	PF07021.7	gi|449067036|ref|YP_007434118.1|	-	0.0083	15.5	0.1	0.012	15.0	0.1	1.2	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
CheR	PF01739.13	gi|449067036|ref|YP_007434118.1|	-	0.02	14.1	0.1	1	8.6	0.0	2.1	1	1	1	2	2	2	0	CheR	methyltransferase,	SAM	binding	domain
RrnaAD	PF00398.15	gi|449067036|ref|YP_007434118.1|	-	0.022	13.7	0.0	0.036	13.0	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	RNA	adenine	dimethylase
TPMT	PF05724.6	gi|449067036|ref|YP_007434118.1|	-	0.048	13.1	0.0	0.71	9.2	0.0	2.0	1	1	0	1	1	1	0	Thiopurine	S-methyltransferase	(TPMT)
Methyltransf_24	PF13578.1	gi|449067036|ref|YP_007434118.1|	-	0.099	13.4	0.1	0.14	12.9	0.1	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
Polyketide_cyc	PF03364.15	gi|449067037|ref|YP_007434119.1|	-	0.022	14.7	0.0	0.039	13.9	0.0	1.4	1	1	0	1	1	1	0	Polyketide	cyclase	/	dehydrase	and	lipid	transport
HIT	PF01230.18	gi|449067038|ref|YP_007434120.1|	-	2.2e-23	82.6	0.0	2.7e-23	82.3	0.0	1.1	1	0	0	1	1	1	1	HIT	domain
DcpS_C	PF11969.3	gi|449067038|ref|YP_007434120.1|	-	1.6e-11	44.4	0.1	3.7e-11	43.2	0.0	1.5	2	0	0	2	2	2	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
FemAB	PF02388.11	gi|449067038|ref|YP_007434120.1|	-	0.011	14.5	0.0	0.014	14.0	0.0	1.1	1	0	0	1	1	1	0	FemAB	family
CwfJ_C_1	PF04677.10	gi|449067038|ref|YP_007434120.1|	-	0.012	15.2	0.1	0.021	14.4	0.0	1.4	2	0	0	2	2	2	0	Protein	similar	to	CwfJ	C-terminus	1
Acyl-CoA_dh_1	PF00441.19	gi|449067039|ref|YP_007434121.1|	-	2.1e-37	128.5	0.2	3.4e-37	127.8	0.2	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.11	gi|449067039|ref|YP_007434121.1|	-	2.4e-27	95.7	0.0	6.9e-27	94.2	0.0	1.8	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|449067039|ref|YP_007434121.1|	-	2.4e-18	65.3	0.1	5.5e-18	64.2	0.1	1.6	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.6	gi|449067039|ref|YP_007434121.1|	-	3.2e-16	59.7	0.0	5e-16	59.1	0.0	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
ABC_tran	PF00005.22	gi|449067040|ref|YP_007434122.1|	-	9e-31	106.9	0.0	7.2e-30	104.0	0.0	2.2	2	0	0	2	2	2	1	ABC	transporter
oligo_HPY	PF08352.7	gi|449067040|ref|YP_007434122.1|	-	4.6e-17	62.1	0.0	8.1e-17	61.3	0.0	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|449067040|ref|YP_007434122.1|	-	1.3e-12	48.2	0.6	1.3e-11	45.0	0.0	2.4	2	1	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|449067040|ref|YP_007434122.1|	-	7.7e-07	29.3	0.0	0.0074	16.4	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|449067040|ref|YP_007434122.1|	-	1.1e-06	28.0	0.1	7.1e-06	25.4	0.1	2.0	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_33	PF13671.1	gi|449067040|ref|YP_007434122.1|	-	2.6e-05	24.1	0.0	0.00011	22.0	0.0	1.8	1	1	0	2	2	2	1	AAA	domain
AAA_18	PF13238.1	gi|449067040|ref|YP_007434122.1|	-	0.00011	22.5	0.0	0.00035	20.8	0.0	2.0	1	0	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|449067040|ref|YP_007434122.1|	-	0.00011	21.7	0.0	0.2	11.0	0.0	2.3	2	0	0	2	2	2	2	AAA-like	domain
AAA_25	PF13481.1	gi|449067040|ref|YP_007434122.1|	-	0.00051	19.4	0.0	1.2	8.5	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|449067040|ref|YP_007434122.1|	-	0.0016	17.5	4.1	0.16	11.0	0.1	2.8	3	0	0	3	3	3	2	AAA	ATPase	domain
AAA_17	PF13207.1	gi|449067040|ref|YP_007434122.1|	-	0.0023	18.7	0.0	0.0055	17.5	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
SbcCD_C	PF13558.1	gi|449067040|ref|YP_007434122.1|	-	0.0053	16.6	0.0	0.018	14.9	0.0	1.9	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_29	PF13555.1	gi|449067040|ref|YP_007434122.1|	-	0.0054	16.2	0.1	0.01	15.3	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.1	gi|449067040|ref|YP_007434122.1|	-	0.0064	16.4	0.2	0.025	14.5	0.1	1.9	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_13	PF13166.1	gi|449067040|ref|YP_007434122.1|	-	0.012	14.1	0.9	0.45	8.9	0.0	2.3	2	1	0	2	2	2	0	AAA	domain
DUF258	PF03193.11	gi|449067040|ref|YP_007434122.1|	-	0.018	14.2	0.0	0.037	13.2	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
NACHT	PF05729.7	gi|449067040|ref|YP_007434122.1|	-	0.022	14.4	0.3	0.1	12.2	0.1	2.0	2	0	0	2	2	2	0	NACHT	domain
MobB	PF03205.9	gi|449067040|ref|YP_007434122.1|	-	0.025	14.2	0.0	0.054	13.1	0.0	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
UPF0079	PF02367.12	gi|449067040|ref|YP_007434122.1|	-	0.037	13.6	0.1	0.075	12.6	0.1	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
NB-ARC	PF00931.17	gi|449067040|ref|YP_007434122.1|	-	0.038	12.8	0.4	0.15	10.8	0.2	1.8	2	0	0	2	2	2	0	NB-ARC	domain
IstB_IS21	PF01695.12	gi|449067040|ref|YP_007434122.1|	-	0.1	12.0	0.1	0.32	10.3	0.0	1.7	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
Sigma54_activ_2	PF14532.1	gi|449067040|ref|YP_007434122.1|	-	0.1	12.6	0.0	4.1	7.4	0.0	2.3	2	0	0	2	2	2	0	Sigma-54	interaction	domain
DEAD	PF00270.24	gi|449067040|ref|YP_007434122.1|	-	0.14	11.6	0.5	1.4	8.3	0.4	2.5	1	1	0	1	1	1	0	DEAD/DEAH	box	helicase
ABC_tran	PF00005.22	gi|449067041|ref|YP_007434123.1|	-	9.7e-25	87.4	0.1	3.2e-23	82.5	0.1	2.4	1	1	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|449067041|ref|YP_007434123.1|	-	2.3e-20	72.7	0.1	3.9e-20	71.9	0.0	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|449067041|ref|YP_007434123.1|	-	1.3e-15	58.1	2.7	2.4e-15	57.2	1.9	1.4	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|449067041|ref|YP_007434123.1|	-	2.7e-06	26.8	0.0	5.9e-05	22.3	0.0	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_25	PF13481.1	gi|449067041|ref|YP_007434123.1|	-	1.9e-05	24.1	0.7	0.0055	16.1	0.3	3.0	2	1	1	3	3	3	1	AAA	domain
AAA_29	PF13555.1	gi|449067041|ref|YP_007434123.1|	-	0.00037	19.9	0.1	0.00081	18.8	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.1	gi|449067041|ref|YP_007434123.1|	-	0.0023	18.0	0.7	0.46	10.6	0.2	2.9	2	1	0	2	2	2	1	AAA	domain
AAA_15	PF13175.1	gi|449067041|ref|YP_007434123.1|	-	0.0057	15.7	0.1	0.0057	15.7	0.1	2.2	1	1	0	2	2	2	1	AAA	ATPase	domain
PRK	PF00485.13	gi|449067041|ref|YP_007434123.1|	-	0.0062	16.1	0.0	0.0097	15.4	0.0	1.4	1	0	0	1	1	1	1	Phosphoribulokinase	/	Uridine	kinase	family
OSCP	PF00213.13	gi|449067041|ref|YP_007434123.1|	-	0.017	14.9	0.5	0.056	13.3	0.3	1.9	1	1	0	1	1	1	0	ATP	synthase	delta	(OSCP)	subunit
Mg_chelatase	PF01078.16	gi|449067041|ref|YP_007434123.1|	-	0.047	12.8	0.0	0.43	9.7	0.0	2.1	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
AAA_10	PF12846.2	gi|449067041|ref|YP_007434123.1|	-	0.052	12.9	2.4	1.1	8.5	1.6	2.6	1	1	0	1	1	1	0	AAA-like	domain
AAA_18	PF13238.1	gi|449067041|ref|YP_007434123.1|	-	0.07	13.4	2.7	0.19	12.0	0.1	2.4	1	1	1	2	2	2	0	AAA	domain
KaiC	PF06745.8	gi|449067041|ref|YP_007434123.1|	-	0.077	12.1	2.0	2.6	7.1	0.1	2.6	3	0	0	3	3	3	0	KaiC
AAA_17	PF13207.1	gi|449067041|ref|YP_007434123.1|	-	0.083	13.7	0.8	0.31	11.8	0.5	2.2	1	1	0	1	1	1	0	AAA	domain
SbcCD_C	PF13558.1	gi|449067041|ref|YP_007434123.1|	-	0.15	11.9	0.0	0.38	10.6	0.0	1.7	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
ABC_ATPase	PF09818.4	gi|449067041|ref|YP_007434123.1|	-	0.21	10.1	1.4	0.96	7.9	0.1	2.4	2	1	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
AAA_16	PF13191.1	gi|449067041|ref|YP_007434123.1|	-	0.24	11.3	1.0	0.65	9.9	0.7	1.9	1	1	0	1	1	1	0	AAA	ATPase	domain
BPD_transp_1	PF00528.17	gi|449067042|ref|YP_007434124.1|	-	5.2e-30	104.3	14.2	5.2e-30	104.3	9.8	2.0	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.2	gi|449067042|ref|YP_007434124.1|	-	3.4e-06	26.3	0.5	3.4e-06	26.3	0.4	2.6	4	0	0	4	4	4	1	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
BPD_transp_1	PF00528.17	gi|449067043|ref|YP_007434125.1|	-	6.6e-41	139.8	16.6	6.6e-41	139.8	11.5	2.7	2	1	0	3	3	3	1	Binding-protein-dependent	transport	system	inner	membrane	component
SBP_bac_5	PF00496.17	gi|449067044|ref|YP_007434126.1|	-	6.5e-55	186.4	10.5	6.5e-55	186.4	7.3	1.9	2	0	0	2	2	2	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
PKD	PF00801.15	gi|449067044|ref|YP_007434126.1|	-	3.1e-07	30.0	8.6	0.00057	19.5	0.4	3.8	3	1	0	3	3	3	2	PKD	domain
U-box	PF04564.10	gi|449067044|ref|YP_007434126.1|	-	0.036	14.0	0.0	0.26	11.2	0.0	2.2	2	0	0	2	2	2	0	U-box	domain
DUF515	PF04415.7	gi|449067044|ref|YP_007434126.1|	-	0.092	10.9	7.1	0.074	11.2	1.4	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF515)
CD34_antigen	PF06365.7	gi|449067044|ref|YP_007434126.1|	-	0.16	11.6	0.1	0.25	10.9	0.1	1.2	1	0	0	1	1	1	0	CD34/Podocalyxin	family
Pkinase	PF00069.20	gi|449067047|ref|YP_007434129.1|	-	2e-34	118.9	0.0	2.7e-34	118.4	0.0	1.2	1	0	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|449067047|ref|YP_007434129.1|	-	1.9e-17	63.2	0.0	3.8e-17	62.2	0.0	1.5	1	1	0	1	1	1	1	Protein	tyrosine	kinase
Kinase-like	PF14531.1	gi|449067047|ref|YP_007434129.1|	-	0.0035	16.3	0.0	0.018	14.0	0.0	1.9	1	1	0	1	1	1	1	Kinase-like
Kdo	PF06293.9	gi|449067047|ref|YP_007434129.1|	-	0.0042	16.1	0.0	0.0065	15.5	0.0	1.2	1	0	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
GTP_EFTU_D2	PF03144.20	gi|449067047|ref|YP_007434129.1|	-	0.058	13.5	3.4	0.96	9.6	0.2	3.3	3	1	0	3	3	3	0	Elongation	factor	Tu	domain	2
Nol1_Nop2_Fmu	PF01189.12	gi|449067048|ref|YP_007434130.1|	-	1.2e-36	126.5	0.0	1.7e-36	126.1	0.0	1.2	1	0	0	1	1	1	1	NOL1/NOP2/sun	family
Methyltransf_31	PF13847.1	gi|449067048|ref|YP_007434130.1|	-	1.1e-11	44.5	0.1	5.7e-11	42.2	0.0	2.1	2	1	0	2	2	2	1	Methyltransferase	domain
PCMT	PF01135.14	gi|449067048|ref|YP_007434130.1|	-	2.9e-08	33.4	0.0	4.6e-08	32.8	0.0	1.3	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_4	PF02390.12	gi|449067048|ref|YP_007434130.1|	-	1.1e-05	24.5	0.4	2.7e-05	23.3	0.1	1.7	1	1	0	1	1	1	1	Putative	methyltransferase
Methyltransf_25	PF13649.1	gi|449067048|ref|YP_007434130.1|	-	2.2e-05	24.7	0.0	0.00018	21.8	0.0	2.3	2	0	0	2	2	2	1	Methyltransferase	domain
FtsJ	PF01728.14	gi|449067048|ref|YP_007434130.1|	-	5.1e-05	23.3	0.0	7.1e-05	22.8	0.0	1.4	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
Methyltransf_18	PF12847.2	gi|449067048|ref|YP_007434130.1|	-	7.6e-05	23.2	0.0	0.00024	21.6	0.0	1.8	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|449067048|ref|YP_007434130.1|	-	0.00022	21.6	0.1	0.0028	18.1	0.0	2.6	3	0	0	3	3	3	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|449067048|ref|YP_007434130.1|	-	0.00033	19.8	0.1	0.00075	18.6	0.0	1.5	1	1	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
MTS	PF05175.9	gi|449067048|ref|YP_007434130.1|	-	0.001	18.4	0.0	0.0019	17.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	small	domain
FmrO	PF07091.6	gi|449067048|ref|YP_007434130.1|	-	0.025	13.5	0.0	0.045	12.7	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	RNA	methyltransferase	(FmrO)
CMAS	PF02353.15	gi|449067048|ref|YP_007434130.1|	-	0.027	13.5	0.0	0.051	12.6	0.0	1.4	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
Methyltransf_23	PF13489.1	gi|449067048|ref|YP_007434130.1|	-	0.047	13.3	0.0	0.093	12.4	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
DUF749	PF05370.6	gi|449067048|ref|YP_007434130.1|	-	0.057	13.3	1.6	2.2	8.2	0.0	3.1	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF749)
Fibrillarin	PF01269.12	gi|449067048|ref|YP_007434130.1|	-	0.09	11.6	0.0	0.15	10.9	0.0	1.4	1	0	0	1	1	1	0	Fibrillarin
Pox_A_type_inc	PF04508.7	gi|449067048|ref|YP_007434130.1|	-	0.12	12.2	1.0	4.2	7.3	0.1	2.8	2	0	0	2	2	2	0	Viral	A-type	inclusion	protein	repeat
Radical_SAM	PF04055.16	gi|449067049|ref|YP_007434131.1|	-	2e-21	76.8	0.0	3.6e-21	76.0	0.0	1.4	1	0	0	1	1	1	1	Radical	SAM	superfamily
Acetyltransf_1	PF00583.19	gi|449067049|ref|YP_007434131.1|	-	4.5e-06	26.6	0.1	1.7e-05	24.7	0.0	2.0	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|449067049|ref|YP_007434131.1|	-	0.0022	18.1	0.8	0.014	15.5	0.0	2.7	2	1	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Sugar_tr	PF00083.19	gi|449067050|ref|YP_007434132.1|	-	6.9e-48	163.3	29.8	9.7e-48	162.8	20.6	1.1	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|449067050|ref|YP_007434132.1|	-	5e-24	84.6	33.2	5e-24	84.6	23.0	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
RHH_1	PF01402.16	gi|449067051|ref|YP_007434133.1|	-	0.071	13.0	1.1	0.12	12.3	0.4	1.6	1	1	1	2	2	2	0	Ribbon-helix-helix	protein,	copG	family
PSD5	PF07637.6	gi|449067051|ref|YP_007434133.1|	-	0.11	12.5	0.1	0.15	12.1	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1595)
Ndufs5	PF10200.4	gi|449067052|ref|YP_007434134.1|	-	0.065	13.2	0.0	0.57	10.2	0.0	2.2	1	1	0	1	1	1	0	NADH:ubiquinone	oxidoreductase,	NDUFS5-15kDa
DUF504	PF04457.7	gi|449067054|ref|YP_007434136.1|	-	5.4e-16	58.4	1.1	8e-16	57.9	0.7	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF504)
Thermopsin	PF05317.6	gi|449067055|ref|YP_007434137.1|	-	1.7e-85	286.1	22.6	1.7e-85	286.1	15.6	2.4	2	1	0	2	2	2	1	Thermopsin
CbiA	PF01656.18	gi|449067056|ref|YP_007434138.1|	-	1.8e-12	47.0	0.1	3.5e-12	46.1	0.0	1.6	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.1	gi|449067056|ref|YP_007434138.1|	-	6.8e-07	29.3	0.1	4.2e-06	26.7	0.0	2.4	2	1	1	3	3	3	1	AAA	domain
ArsA_ATPase	PF02374.10	gi|449067056|ref|YP_007434138.1|	-	2.5e-05	23.5	1.3	3.7e-05	22.9	0.3	1.7	2	0	0	2	2	2	1	Anion-transporting	ATPase
YhjQ	PF06564.7	gi|449067056|ref|YP_007434138.1|	-	0.00094	18.6	0.0	0.0015	17.9	0.0	1.3	1	0	0	1	1	1	1	YhjQ	protein
MipZ	PF09140.6	gi|449067056|ref|YP_007434138.1|	-	0.0049	15.9	0.6	0.011	14.7	0.1	1.8	2	0	0	2	2	2	1	ATPase	MipZ
Fer4_NifH	PF00142.13	gi|449067056|ref|YP_007434138.1|	-	0.0079	15.4	0.7	0.02	14.0	0.0	2.0	2	0	0	2	2	2	1	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
AAA_25	PF13481.1	gi|449067056|ref|YP_007434138.1|	-	0.062	12.6	0.2	0.15	11.4	0.1	1.6	1	0	0	1	1	1	0	AAA	domain
VirC1	PF07015.6	gi|449067056|ref|YP_007434138.1|	-	0.072	12.1	0.1	0.15	11.0	0.1	1.4	1	0	0	1	1	1	0	VirC1	protein
SRP54	PF00448.17	gi|449067056|ref|YP_007434138.1|	-	0.093	12.1	0.4	0.51	9.7	0.2	2.1	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
BEX	PF04538.7	gi|449067056|ref|YP_007434138.1|	-	0.1	12.8	0.0	0.46	10.7	0.0	2.0	2	0	0	2	2	2	0	Brain	expressed	X-linked	like	family
Glyco_tranf_2_3	PF13641.1	gi|449067057|ref|YP_007434139.1|	-	1.8e-34	119.5	0.0	2.4e-34	119.0	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|449067057|ref|YP_007434139.1|	-	5.3e-28	98.0	0.0	5.3e-28	98.0	0.0	2.8	3	0	0	3	3	3	1	Glycosyl	transferase	family	group	2
Glycos_transf_2	PF00535.21	gi|449067057|ref|YP_007434139.1|	-	1.1e-16	61.0	0.1	1.5e-16	60.5	0.1	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.1	gi|449067057|ref|YP_007434139.1|	-	3.2e-13	49.3	0.0	4.7e-13	48.7	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Cellulose_synt	PF03552.9	gi|449067057|ref|YP_007434139.1|	-	2.7e-05	22.7	17.6	0.0034	15.7	8.7	2.8	1	1	1	2	2	2	2	Cellulose	synthase
GYD	PF08734.6	gi|449067058|ref|YP_007434140.1|	-	4.5e-27	93.6	0.1	5.1e-27	93.4	0.1	1.0	1	0	0	1	1	1	1	GYD	domain
AsnC_trans_reg	PF01037.16	gi|449067058|ref|YP_007434140.1|	-	2.4e-05	23.9	0.2	4.4e-05	23.0	0.1	1.5	1	1	0	1	1	1	1	AsnC	family
Transcrip_reg	PF01709.15	gi|449067058|ref|YP_007434140.1|	-	0.082	12.0	0.0	0.1	11.7	0.0	1.1	1	0	0	1	1	1	0	Transcriptional	regulator
AMP-binding	PF00501.23	gi|449067060|ref|YP_007434142.1|	-	3.8e-82	275.9	0.0	4.7e-82	275.6	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|449067060|ref|YP_007434142.1|	-	6.4e-16	59.0	0.0	1.3e-15	58.1	0.0	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
DUF457	PF04307.9	gi|449067061|ref|YP_007434143.1|	-	3.6e-17	62.1	13.2	3.6e-16	58.8	9.2	2.7	1	1	0	1	1	1	1	Predicted	membrane-bound	metal-dependent	hydrolase	(DUF457)
DUF4184	PF13803.1	gi|449067061|ref|YP_007434143.1|	-	0.0022	17.3	0.4	0.0022	17.3	0.3	2.4	2	2	0	2	2	2	1	Domain	of	unknown	function	(DUF4184)
VirE_N	PF08800.5	gi|449067061|ref|YP_007434143.1|	-	0.15	11.7	0.0	0.23	11.2	0.0	1.2	1	0	0	1	1	1	0	VirE	N-terminal	domain
Pyridoxal_deC	PF00282.14	gi|449067063|ref|YP_007434145.1|	-	4e-20	71.5	0.0	5.8e-20	71.0	0.0	1.3	1	0	0	1	1	1	1	Pyridoxal-dependent	decarboxylase	conserved	domain
Aminotran_5	PF00266.14	gi|449067063|ref|YP_007434145.1|	-	7.9e-10	38.0	0.0	2.7e-09	36.2	0.0	1.8	1	1	0	1	1	1	1	Aminotransferase	class-V
Aminotran_1_2	PF00155.16	gi|449067063|ref|YP_007434145.1|	-	2.3e-08	33.3	0.0	1.3e-06	27.6	0.0	2.1	2	0	0	2	2	2	1	Aminotransferase	class	I	and	II
DegT_DnrJ_EryC1	PF01041.12	gi|449067063|ref|YP_007434145.1|	-	3.5e-06	26.3	0.0	5.2e-06	25.7	0.0	1.2	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Cys_Met_Meta_PP	PF01053.15	gi|449067063|ref|YP_007434145.1|	-	0.00099	17.4	0.0	0.0014	16.9	0.0	1.2	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Beta_elim_lyase	PF01212.16	gi|449067063|ref|YP_007434145.1|	-	0.0017	17.5	0.0	0.0029	16.8	0.0	1.4	1	1	0	1	1	1	1	Beta-eliminating	lyase
FGGY_N	PF00370.16	gi|449067064|ref|YP_007434146.1|	-	1.9e-40	138.7	0.0	3.1e-40	138.0	0.0	1.3	1	0	0	1	1	1	1	FGGY	family	of	carbohydrate	kinases,	N-terminal	domain
FGGY_C	PF02782.11	gi|449067064|ref|YP_007434146.1|	-	4.9e-26	91.5	0.0	7.2e-26	91.0	0.0	1.2	1	0	0	1	1	1	1	FGGY	family	of	carbohydrate	kinases,	C-terminal	domain
MreB_Mbl	PF06723.8	gi|449067064|ref|YP_007434146.1|	-	0.0029	16.2	0.2	0.027	13.0	0.0	2.1	2	0	0	2	2	2	1	MreB/Mbl	protein
Hydantoinase_A	PF01968.13	gi|449067064|ref|YP_007434146.1|	-	0.004	16.2	0.0	0.33	10.0	0.1	2.4	2	1	0	2	2	2	2	Hydantoinase/oxoprolinase
DUF4445	PF14574.1	gi|449067064|ref|YP_007434146.1|	-	0.073	11.2	0.1	0.54	8.4	0.0	2.3	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4445)
MFS_1	PF07690.11	gi|449067065|ref|YP_007434147.1|	-	2.1e-32	112.2	38.3	3e-32	111.7	26.5	1.2	1	0	0	1	1	1	1	Major	Facilitator	Superfamily
MFS_2	PF13347.1	gi|449067065|ref|YP_007434147.1|	-	2.3e-08	32.8	28.9	2.3e-08	32.8	20.0	2.2	1	1	1	2	2	2	1	MFS/sugar	transport	protein
DUF973	PF06157.6	gi|449067066|ref|YP_007434148.1|	-	2.4e-44	151.4	39.3	1.3e-43	149.0	27.2	2.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
Pho86	PF11124.3	gi|449067066|ref|YP_007434148.1|	-	0.00047	19.2	1.4	0.00091	18.3	1.0	1.4	1	0	0	1	1	1	1	Inorganic	phosphate	transporter	Pho86
DUF2269	PF10027.4	gi|449067066|ref|YP_007434148.1|	-	0.045	13.5	0.4	0.11	12.2	0.1	1.7	2	0	0	2	2	2	0	Predicted	integral	membrane	protein	(DUF2269)
DUF3566	PF12089.3	gi|449067066|ref|YP_007434148.1|	-	0.085	12.8	11.3	0.056	13.4	1.9	2.9	3	0	0	3	3	3	0	Transmembrane	domain	of	unknown	function	(DUF3566)
DUF4134	PF13572.1	gi|449067066|ref|YP_007434148.1|	-	0.28	11.3	9.3	0.051	13.6	3.0	2.4	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4134)
Yip1	PF04893.12	gi|449067066|ref|YP_007434148.1|	-	0.43	10.0	12.0	0.84	9.1	8.3	1.5	1	1	0	1	1	1	0	Yip1	domain
TMEM154	PF15102.1	gi|449067066|ref|YP_007434148.1|	-	0.7	9.6	5.1	0.12	12.1	0.4	1.9	1	1	1	2	2	2	0	TMEM154	protein	family
DUF1232	PF06803.7	gi|449067066|ref|YP_007434148.1|	-	2.6	7.5	8.0	0.26	10.7	2.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1232)
DUF2639	PF11121.3	gi|449067068|ref|YP_007434150.1|	-	0.14	11.7	0.1	0.16	11.4	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2639)
Cas_NE0113	PF09623.5	gi|449067070|ref|YP_007434152.1|	-	1.3e-12	47.6	0.0	1.8e-12	47.2	0.0	1.3	1	0	0	1	1	1	1	CRISPR-associated	protein	NE0113	(Cas_NE0113)
Cas_Cas02710	PF09670.5	gi|449067070|ref|YP_007434152.1|	-	0.001	17.7	0.0	0.0013	17.4	0.0	1.3	1	0	0	1	1	1	1	CRISPR-associated	protein	(Cas_Cas02710)
ACT	PF01842.20	gi|449067070|ref|YP_007434152.1|	-	0.016	14.6	0.0	0.12	11.8	0.0	2.2	2	0	0	2	2	2	0	ACT	domain
Abhydrolase_6	PF12697.2	gi|449067071|ref|YP_007434153.1|	-	2.1e-32	112.8	0.0	2.4e-32	112.6	0.0	1.0	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|449067071|ref|YP_007434153.1|	-	4e-15	56.0	0.1	4e-14	52.7	0.1	2.4	1	1	0	1	1	1	1	alpha/beta	hydrolase	fold
Abhydrolase_5	PF12695.2	gi|449067071|ref|YP_007434153.1|	-	1.3e-14	54.1	0.0	1.6e-14	53.8	0.0	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_4	PF08386.5	gi|449067071|ref|YP_007434153.1|	-	0.0002	21.2	0.0	0.0003	20.6	0.0	1.3	1	0	0	1	1	1	1	TAP-like	protein
DLH	PF01738.13	gi|449067071|ref|YP_007434153.1|	-	0.00096	18.4	0.0	0.0016	17.7	0.0	1.3	1	0	0	1	1	1	1	Dienelactone	hydrolase	family
Ndr	PF03096.9	gi|449067071|ref|YP_007434153.1|	-	0.0016	16.9	0.0	0.0022	16.5	0.0	1.2	1	0	0	1	1	1	1	Ndr	family
DUF2305	PF10230.4	gi|449067071|ref|YP_007434153.1|	-	0.0035	16.8	0.3	0.008	15.6	0.2	1.6	1	1	0	1	1	1	1	Uncharacterised	conserved	protein	(DUF2305)
Hydrolase_4	PF12146.3	gi|449067071|ref|YP_007434153.1|	-	0.0052	16.6	0.1	0.011	15.5	0.0	1.6	1	0	0	1	1	1	1	Putative	lysophospholipase
ABC2_membrane	PF01061.19	gi|449067072|ref|YP_007434154.1|	-	3e-06	26.5	27.4	3e-06	26.5	19.0	1.5	2	0	0	2	2	2	1	ABC-2	type	transporter
ABC_tran	PF00005.22	gi|449067073|ref|YP_007434155.1|	-	1.4e-14	54.5	0.1	2.3e-14	53.8	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|449067073|ref|YP_007434155.1|	-	2.2e-13	50.8	4.5	4.3e-06	26.9	0.0	2.4	1	1	1	2	2	2	2	AAA	domain
AAA_23	PF13476.1	gi|449067073|ref|YP_007434155.1|	-	4.7e-08	33.6	4.5	1.3e-07	32.1	3.1	2.0	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|449067073|ref|YP_007434155.1|	-	4.4e-06	26.0	0.4	0.00074	18.8	0.0	2.2	1	1	1	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|449067073|ref|YP_007434155.1|	-	2.2e-05	23.8	0.1	4.6e-05	22.8	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
Arch_ATPase	PF01637.13	gi|449067073|ref|YP_007434155.1|	-	0.0026	17.4	0.3	0.0055	16.4	0.2	1.7	1	1	0	1	1	1	1	Archaeal	ATPase
AAA	PF00004.24	gi|449067073|ref|YP_007434155.1|	-	0.0028	17.8	0.0	0.0051	17.0	0.0	1.7	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_33	PF13671.1	gi|449067073|ref|YP_007434155.1|	-	0.0052	16.6	0.0	0.055	13.3	0.0	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|449067073|ref|YP_007434155.1|	-	0.0065	15.5	8.8	0.012	14.7	4.8	1.9	1	1	1	2	2	2	1	AAA	ATPase	domain
DUF3584	PF12128.3	gi|449067073|ref|YP_007434155.1|	-	0.016	12.5	0.3	0.022	12.1	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
AAA_17	PF13207.1	gi|449067073|ref|YP_007434155.1|	-	0.017	15.9	0.4	0.036	14.9	0.3	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_19	PF13245.1	gi|449067073|ref|YP_007434155.1|	-	0.023	14.4	0.1	0.043	13.5	0.1	1.4	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_16	PF13191.1	gi|449067073|ref|YP_007434155.1|	-	0.032	14.2	0.2	0.052	13.5	0.1	1.5	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_18	PF13238.1	gi|449067073|ref|YP_007434155.1|	-	0.057	13.7	3.3	0.72	10.1	2.3	2.5	1	1	0	1	1	1	0	AAA	domain
cobW	PF02492.14	gi|449067073|ref|YP_007434155.1|	-	0.057	12.8	0.0	0.11	11.9	0.0	1.5	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
SbcCD_C	PF13558.1	gi|449067073|ref|YP_007434155.1|	-	0.06	13.2	0.0	0.62	10.0	0.0	2.2	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
G-alpha	PF00503.15	gi|449067073|ref|YP_007434155.1|	-	0.066	11.8	0.1	0.1	11.2	0.1	1.2	1	0	0	1	1	1	0	G-protein	alpha	subunit
AAA_13	PF13166.1	gi|449067073|ref|YP_007434155.1|	-	0.09	11.2	0.1	0.12	10.8	0.1	1.2	1	0	0	1	1	1	0	AAA	domain
T2SE	PF00437.15	gi|449067073|ref|YP_007434155.1|	-	0.093	11.6	0.1	0.17	10.7	0.1	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
NACHT	PF05729.7	gi|449067073|ref|YP_007434155.1|	-	0.12	11.9	0.1	0.22	11.1	0.1	1.4	1	0	0	1	1	1	0	NACHT	domain
HTH_34	PF13601.1	gi|449067075|ref|YP_007434157.1|	-	8.3e-15	54.5	0.1	1.1e-14	54.2	0.0	1.1	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_20	PF12840.2	gi|449067075|ref|YP_007434157.1|	-	8.2e-09	35.1	0.0	1.1e-08	34.7	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|449067075|ref|YP_007434157.1|	-	5.1e-08	32.4	0.1	1.3e-07	31.1	0.1	1.7	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_IclR	PF09339.5	gi|449067075|ref|YP_007434157.1|	-	4e-05	23.1	0.0	5.6e-05	22.6	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
TrmB	PF01978.14	gi|449067075|ref|YP_007434157.1|	-	7.1e-05	22.4	0.1	0.0002	20.9	0.0	1.7	1	1	1	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HxlR	PF01638.12	gi|449067075|ref|YP_007434157.1|	-	8e-05	22.1	0.3	0.00012	21.6	0.2	1.4	1	1	0	1	1	1	1	HxlR-like	helix-turn-helix
MarR_2	PF12802.2	gi|449067075|ref|YP_007434157.1|	-	0.00025	20.6	0.0	0.00034	20.2	0.0	1.2	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.1	gi|449067075|ref|YP_007434157.1|	-	0.00026	21.2	0.0	0.00038	20.7	0.0	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
PadR	PF03551.9	gi|449067075|ref|YP_007434157.1|	-	0.00054	19.6	0.0	0.0007	19.3	0.0	1.2	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
MarR	PF01047.17	gi|449067075|ref|YP_007434157.1|	-	0.00081	19.0	0.2	0.0014	18.3	0.1	1.3	1	0	0	1	1	1	1	MarR	family
B-block_TFIIIC	PF04182.7	gi|449067075|ref|YP_007434157.1|	-	0.00093	18.9	0.0	0.0012	18.6	0.0	1.2	1	0	0	1	1	1	1	B-block	binding	subunit	of	TFIIIC
HTH_24	PF13412.1	gi|449067075|ref|YP_007434157.1|	-	0.0036	16.6	0.4	0.013	14.8	0.0	2.0	1	1	1	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_12	PF08461.5	gi|449067075|ref|YP_007434157.1|	-	0.0047	16.6	0.0	0.011	15.4	0.0	1.6	1	1	0	1	1	1	1	Ribonuclease	R	winged-helix	domain
HTH_45	PF14947.1	gi|449067075|ref|YP_007434157.1|	-	0.017	14.9	0.2	0.026	14.3	0.1	1.4	1	0	0	1	1	1	0	Winged	helix-turn-helix
DUF2513	PF10711.4	gi|449067075|ref|YP_007434157.1|	-	0.027	14.5	0.0	0.031	14.3	0.0	1.2	1	0	0	1	1	1	0	Hypothetical	protein	(DUF2513)
Sulfolobus_pRN	PF05584.6	gi|449067075|ref|YP_007434157.1|	-	0.05	13.5	0.0	0.07	13.0	0.0	1.3	1	0	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
DUF2250	PF10007.4	gi|449067075|ref|YP_007434157.1|	-	0.073	12.9	0.3	0.54	10.2	0.0	2.0	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Rrf2	PF02082.15	gi|449067075|ref|YP_007434157.1|	-	0.084	13.0	0.1	0.13	12.3	0.1	1.4	1	0	0	1	1	1	0	Transcriptional	regulator
Acyl-CoA_dh_N	PF02771.11	gi|449067076|ref|YP_007434158.1|	-	1.3e-24	86.9	0.0	2.4e-24	86.0	0.0	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|449067076|ref|YP_007434158.1|	-	4.5e-18	64.4	0.0	7.9e-18	63.7	0.0	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_1	PF00441.19	gi|449067076|ref|YP_007434158.1|	-	2.1e-13	50.6	0.1	8.2e-07	29.2	0.0	2.4	1	1	1	2	2	2	2	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_ox_N	PF14749.1	gi|449067076|ref|YP_007434158.1|	-	0.0029	17.9	0.0	0.0054	17.0	0.0	1.5	1	0	0	1	1	1	1	Acyl-coenzyme	A	oxidase	N-terminal
HpaB_N	PF11794.3	gi|449067076|ref|YP_007434158.1|	-	0.04	13.3	0.1	0.24	10.7	0.1	2.0	1	1	0	1	1	1	0	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
MaoC_dehydratas	PF01575.14	gi|449067077|ref|YP_007434159.1|	-	4.5e-15	55.1	0.0	5.8e-15	54.7	0.0	1.1	1	0	0	1	1	1	1	MaoC	like	domain
MaoC_dehydrat_N	PF13452.1	gi|449067077|ref|YP_007434159.1|	-	6.5e-09	35.6	0.0	8.6e-09	35.2	0.0	1.1	1	0	0	1	1	1	1	N-terminal	half	of	MaoC	dehydratase
Acyl-CoA_dh_1	PF00441.19	gi|449067078|ref|YP_007434160.1|	-	1.9e-09	37.7	0.0	3.3e-07	30.5	0.0	2.2	2	0	0	2	2	2	2	Acyl-CoA	dehydrogenase,	C-terminal	domain
Amidohydro_3	PF07969.6	gi|449067079|ref|YP_007434161.1|	-	4.5e-27	95.3	0.0	3.8e-26	92.2	0.0	1.9	1	1	1	2	2	2	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|449067079|ref|YP_007434161.1|	-	2.4e-15	57.2	0.0	3.3e-15	56.8	0.0	1.2	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_5	PF13594.1	gi|449067079|ref|YP_007434161.1|	-	1.2e-05	25.0	0.3	4.4e-05	23.2	0.0	2.1	2	1	0	2	2	2	1	Amidohydrolase
Amidohydro_1	PF01979.15	gi|449067079|ref|YP_007434161.1|	-	1.5e-05	24.8	0.0	0.00012	21.8	0.0	1.9	1	1	0	1	1	1	1	Amidohydrolase	family
UPF0547	PF10571.4	gi|449067080|ref|YP_007434162.1|	-	2.3e-09	36.7	1.2	3.4e-09	36.2	0.8	1.3	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
zf-ribbon_3	PF13248.1	gi|449067080|ref|YP_007434162.1|	-	5.2e-07	28.6	3.9	7.6e-07	28.1	2.7	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|449067080|ref|YP_007434162.1|	-	1.7e-05	24.1	3.4	2.4e-05	23.6	2.4	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|449067080|ref|YP_007434162.1|	-	7e-05	22.5	1.2	0.00011	21.9	0.8	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-dskA_traR	PF01258.12	gi|449067080|ref|YP_007434162.1|	-	0.071	12.8	1.0	0.13	12.0	0.7	1.3	1	0	0	1	1	1	0	Prokaryotic	dksA/traR	C4-type	zinc	finger
DUF4231	PF14015.1	gi|449067081|ref|YP_007434163.1|	-	0.48	10.4	7.3	0.13	12.3	2.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4231)
PMP22_Claudin	PF00822.15	gi|449067081|ref|YP_007434163.1|	-	2.1	7.9	4.3	1.6	8.3	2.1	1.4	1	1	0	1	1	1	0	PMP-22/EMP/MP20/Claudin	family
DrsE	PF02635.10	gi|449067082|ref|YP_007434164.1|	-	7.5e-12	45.3	0.1	8.4e-12	45.2	0.0	1.0	1	0	0	1	1	1	1	DsrE/DsrF-like	family
COX15-CtaA	PF02628.10	gi|449067083|ref|YP_007434165.1|	-	0.0005	19.0	14.9	0.0045	15.8	6.0	2.0	1	1	1	2	2	2	2	Cytochrome	oxidase	assembly	protein
TcdA_TcdB_pore	PF12920.2	gi|449067083|ref|YP_007434165.1|	-	0.0034	15.3	0.6	0.004	15.1	0.4	1.1	1	0	0	1	1	1	1	TcdA/TcdB	pore	forming	domain
UbiA	PF01040.13	gi|449067083|ref|YP_007434165.1|	-	0.26	10.4	12.7	0.34	10.0	8.8	1.2	1	0	0	1	1	1	0	UbiA	prenyltransferase	family
DUF2537	PF10801.3	gi|449067083|ref|YP_007434165.1|	-	2.5	8.2	12.0	26	4.9	1.2	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2537)
YfhO	PF09586.5	gi|449067083|ref|YP_007434165.1|	-	3.2	5.6	8.2	3.1	5.6	5.7	1.0	1	0	0	1	1	1	0	Bacterial	membrane	protein	YfhO
DUF4328	PF14219.1	gi|449067083|ref|YP_007434165.1|	-	7.7	5.7	6.4	7.7	5.7	0.1	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4328)
3HCDH_N	PF02737.13	gi|449067085|ref|YP_007434167.1|	-	6.9e-64	214.8	0.2	9.2e-64	214.3	0.2	1.2	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
3HCDH	PF00725.17	gi|449067085|ref|YP_007434167.1|	-	1.1e-46	157.1	0.6	5.2e-22	78.0	0.1	3.0	3	0	0	3	3	3	2	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
NAD_binding_2	PF03446.10	gi|449067085|ref|YP_007434167.1|	-	0.00078	19.3	0.0	0.0015	18.3	0.0	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
F420_oxidored	PF03807.12	gi|449067085|ref|YP_007434167.1|	-	0.0043	17.4	0.1	0.011	16.1	0.0	1.8	1	1	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_Gly3P_dh_N	PF01210.18	gi|449067085|ref|YP_007434167.1|	-	0.0044	16.7	1.0	0.01	15.5	0.7	1.7	1	1	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
HTH_27	PF13463.1	gi|449067085|ref|YP_007434167.1|	-	0.12	12.7	0.3	6.9	7.0	0.0	2.8	3	0	0	3	3	3	0	Winged	helix	DNA-binding	domain
ADH_N	PF08240.7	gi|449067087|ref|YP_007434169.1|	-	1.5e-18	66.5	0.1	2.4e-18	65.8	0.1	1.3	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
NAD_binding_10	PF13460.1	gi|449067087|ref|YP_007434169.1|	-	0.0004	20.4	0.0	0.00071	19.6	0.0	1.3	1	0	0	1	1	1	1	NADH(P)-binding
ADH_zinc_N	PF00107.21	gi|449067087|ref|YP_007434169.1|	-	0.0047	16.4	0.0	0.014	14.9	0.0	1.8	1	1	0	1	1	1	1	Zinc-binding	dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|449067087|ref|YP_007434169.1|	-	0.0056	15.8	0.0	0.016	14.3	0.0	1.7	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Shikimate_DH	PF01488.15	gi|449067087|ref|YP_007434169.1|	-	0.011	15.7	0.0	0.13	12.3	0.0	2.6	4	0	0	4	4	4	0	Shikimate	/	quinate	5-dehydrogenase
Arch_ATPase	PF01637.13	gi|449067088|ref|YP_007434170.1|	-	1.6e-36	126.1	0.8	1.6e-36	126.1	0.5	1.5	2	0	0	2	2	2	1	Archaeal	ATPase
AAA_14	PF13173.1	gi|449067088|ref|YP_007434170.1|	-	1.7e-11	44.0	0.4	2.8e-09	36.9	0.1	3.0	2	1	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|449067088|ref|YP_007434170.1|	-	1.7e-06	28.1	0.1	5.9e-06	26.4	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|449067088|ref|YP_007434170.1|	-	3.8e-05	23.7	0.1	0.00028	20.9	0.1	2.2	2	1	0	2	2	2	1	AAA	ATPase	domain
AAA	PF00004.24	gi|449067088|ref|YP_007434170.1|	-	0.001	19.2	0.1	0.015	15.4	0.0	2.7	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF3388	PF11868.3	gi|449067088|ref|YP_007434170.1|	-	0.0097	15.0	0.0	3.5	6.7	0.0	2.4	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF3388)
AMP-binding	PF00501.23	gi|449067089|ref|YP_007434171.1|	-	1e-72	244.8	0.0	1.3e-72	244.5	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|449067089|ref|YP_007434171.1|	-	5.6e-14	52.8	0.0	1e-13	52.0	0.0	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
MaoC_dehydratas	PF01575.14	gi|449067090|ref|YP_007434172.1|	-	6.3e-15	54.6	0.0	9.2e-15	54.1	0.0	1.2	1	0	0	1	1	1	1	MaoC	like	domain
MaoC_dehydrat_N	PF13452.1	gi|449067090|ref|YP_007434172.1|	-	0.0072	16.1	0.0	0.013	15.3	0.0	1.4	2	0	0	2	2	2	1	N-terminal	half	of	MaoC	dehydratase
FabA	PF07977.8	gi|449067090|ref|YP_007434172.1|	-	0.025	14.0	0.0	0.033	13.6	0.0	1.3	1	0	0	1	1	1	0	FabA-like	domain
4HBT	PF03061.17	gi|449067090|ref|YP_007434172.1|	-	0.055	13.5	0.0	0.09	12.9	0.0	1.4	1	0	0	1	1	1	0	Thioesterase	superfamily
CoA_transf_3	PF02515.12	gi|449067091|ref|YP_007434173.1|	-	9.5e-49	165.2	0.0	1.2e-48	164.8	0.0	1.1	1	0	0	1	1	1	1	CoA-transferase	family	III
GnsAB	PF08178.6	gi|449067091|ref|YP_007434173.1|	-	0.13	11.9	2.3	3.9	7.2	0.1	2.7	2	0	0	2	2	2	0	GnsA/GnsB	family
Fe-ADH	PF00465.14	gi|449067092|ref|YP_007434174.1|	-	2.7e-47	161.1	0.0	3.6e-47	160.7	0.0	1.1	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH_2	PF13685.1	gi|449067092|ref|YP_007434174.1|	-	3.2e-09	36.4	0.0	4.5e-09	35.9	0.0	1.2	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fer4	PF00037.22	gi|449067093|ref|YP_007434175.1|	-	0.00031	20.1	5.0	0.00046	19.6	3.5	1.3	1	0	0	1	1	1	1	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|449067093|ref|YP_007434175.1|	-	0.00059	19.5	0.2	0.00069	19.3	0.2	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|449067093|ref|YP_007434175.1|	-	0.0022	18.3	1.4	0.0035	17.6	1.0	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_21	PF14697.1	gi|449067093|ref|YP_007434175.1|	-	0.0026	17.5	4.6	0.004	16.9	3.2	1.4	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|449067093|ref|YP_007434175.1|	-	0.0032	17.2	3.0	0.0068	16.2	2.1	1.6	1	0	0	1	1	1	1	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|449067093|ref|YP_007434175.1|	-	0.0077	16.6	0.3	0.012	16.0	0.2	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
DNA_pol_B_2	PF03175.8	gi|449067093|ref|YP_007434175.1|	-	0.014	14.0	1.0	0.017	13.8	0.7	1.1	1	0	0	1	1	1	0	DNA	polymerase	type	B,	organellar	and	viral
Fer4_8	PF13183.1	gi|449067093|ref|YP_007434175.1|	-	0.015	15.3	0.1	0.023	14.7	0.0	1.3	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|449067093|ref|YP_007434175.1|	-	0.1	12.8	4.3	0.39	11.0	3.2	1.6	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|449067093|ref|YP_007434175.1|	-	0.69	10.3	5.0	1.4	9.4	3.5	1.4	1	0	0	1	1	1	0	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|449067093|ref|YP_007434175.1|	-	0.87	10.3	7.7	2.9	8.7	5.4	1.9	1	1	0	1	1	1	0	4Fe-4S	double	cluster	binding	domain
DEAD	PF00270.24	gi|449067095|ref|YP_007434177.1|	-	1.6e-45	154.5	0.0	1.1e-43	148.6	0.0	2.4	2	1	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|449067095|ref|YP_007434177.1|	-	7.2e-26	89.8	0.4	1.7e-25	88.6	0.0	1.9	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|449067095|ref|YP_007434177.1|	-	2.2e-09	37.4	0.0	5.2e-09	36.1	0.0	1.6	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
AAA_19	PF13245.1	gi|449067095|ref|YP_007434177.1|	-	0.00018	21.2	0.0	0.0073	16.0	0.0	2.5	2	0	0	2	2	2	1	Part	of	AAA	domain
CMS1	PF14617.1	gi|449067095|ref|YP_007434177.1|	-	0.0048	16.0	0.1	0.014	14.4	0.0	1.8	2	0	0	2	2	2	1	U3-containing	90S	pre-ribosomal	complex	subunit
AAA_22	PF13401.1	gi|449067095|ref|YP_007434177.1|	-	0.0055	16.8	3.0	0.13	12.3	2.1	2.8	1	1	0	1	1	1	1	AAA	domain
Flavi_DEAD	PF07652.9	gi|449067095|ref|YP_007434177.1|	-	0.029	14.1	0.0	0.13	11.9	0.0	2.1	1	1	0	1	1	1	0	Flavivirus	DEAD	domain
DUF137	PF02006.11	gi|449067095|ref|YP_007434177.1|	-	0.036	13.4	0.1	0.12	11.7	0.0	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	DUF137
DUF2075	PF09848.4	gi|449067095|ref|YP_007434177.1|	-	0.04	12.8	0.0	0.062	12.2	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
T4SS-DNA_transf	PF02534.9	gi|449067095|ref|YP_007434177.1|	-	0.041	12.4	0.0	0.097	11.2	0.0	1.6	2	0	0	2	2	2	0	Type	IV	secretory	system	Conjugative	DNA	transfer
AAA_30	PF13604.1	gi|449067095|ref|YP_007434177.1|	-	0.057	12.9	0.0	0.21	11.1	0.0	1.8	2	1	0	2	2	2	0	AAA	domain
SecA_DEAD	PF07517.9	gi|449067095|ref|YP_007434177.1|	-	0.18	11.0	1.0	1.1	8.4	0.5	2.1	1	1	0	1	1	1	0	SecA	DEAD-like	domain
DUF202	PF02656.10	gi|449067096|ref|YP_007434178.1|	-	1.5e-20	73.1	0.5	1.5e-20	73.1	0.4	2.0	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF202)
Claudin_2	PF13903.1	gi|449067096|ref|YP_007434178.1|	-	0.0009	18.9	4.5	0.0067	16.1	3.1	1.9	1	1	0	1	1	1	1	PMP-22/EMP/MP20/Claudin	tight	junction
SdpI	PF13630.1	gi|449067096|ref|YP_007434178.1|	-	0.01	15.5	7.9	0.024	14.3	0.8	2.2	1	1	1	2	2	2	0	SdpI/YhfL	protein	family
MscS_TM	PF12794.2	gi|449067096|ref|YP_007434178.1|	-	0.016	13.8	0.7	0.017	13.7	0.5	1.1	1	0	0	1	1	1	0	Mechanosensitive	ion	channel	inner	membrane	domain	1
CopD	PF05425.8	gi|449067096|ref|YP_007434178.1|	-	0.023	14.8	2.2	0.058	13.6	1.6	1.6	1	1	1	2	2	2	0	Copper	resistance	protein	D
DUF2910	PF11139.3	gi|449067096|ref|YP_007434178.1|	-	0.025	13.7	3.1	0.051	12.6	2.2	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2910)
Tetraspannin	PF00335.15	gi|449067096|ref|YP_007434178.1|	-	0.031	13.5	0.5	0.031	13.5	0.3	2.0	1	1	1	2	2	2	0	Tetraspanin	family
Connexin_CCC	PF10582.4	gi|449067096|ref|YP_007434178.1|	-	0.043	13.6	1.6	0.072	12.9	0.2	2.0	2	0	0	2	2	2	0	Gap	junction	channel	protein	cysteine-rich	domain
PgaD	PF13994.1	gi|449067096|ref|YP_007434178.1|	-	0.4	10.1	2.9	0.22	11.0	0.1	2.1	1	1	1	2	2	2	0	PgaD-like	protein
YtpI	PF14007.1	gi|449067096|ref|YP_007434178.1|	-	1.9	8.4	9.8	0.12	12.3	1.9	2.0	1	1	1	2	2	2	0	YtpI-like	protein
DUF4064	PF13273.1	gi|449067096|ref|YP_007434178.1|	-	2	8.5	8.3	8.8	6.4	5.7	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4064)
EamA	PF00892.15	gi|449067097|ref|YP_007434179.1|	-	4.6e-22	78.3	39.0	6.6e-15	55.2	8.9	2.5	2	1	0	2	2	2	2	EamA-like	transporter	family
CytB6-F_Fe-S	PF08802.5	gi|449067097|ref|YP_007434179.1|	-	0.57	10.2	0.1	0.57	10.2	0.0	3.2	4	0	0	4	4	4	0	Cytochrome	B6-F	complex	Fe-S	subunit
PSP94	PF05825.6	gi|449067098|ref|YP_007434180.1|	-	0.086	13.1	0.6	0.81	10.0	0.3	2.0	1	1	1	2	2	2	0	Beta-microseminoprotein	(PSP-94)
SIS	PF01380.17	gi|449067099|ref|YP_007434181.1|	-	6.4e-15	54.9	0.3	1.6e-07	30.9	0.1	2.7	2	1	0	2	2	2	2	SIS	domain
DUF3956	PF13104.1	gi|449067099|ref|YP_007434181.1|	-	0.037	13.5	0.1	2	8.0	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3956)
Enterotoxin_b	PF01376.13	gi|449067100|ref|YP_007434182.1|	-	0.11	12.3	0.0	0.14	12.0	0.0	1.1	1	0	0	1	1	1	0	Heat-labile	enterotoxin	beta	chain
Phage_terminase	PF10668.4	gi|449067100|ref|YP_007434182.1|	-	0.11	12.2	0.8	0.16	11.8	0.6	1.3	1	0	0	1	1	1	0	Phage	terminase	small	subunit
UvdE	PF03851.9	gi|449067101|ref|YP_007434183.1|	-	3.3e-63	213.2	0.2	3.9e-63	213.0	0.2	1.1	1	0	0	1	1	1	1	UV-endonuclease	UvdE
Aldedh	PF00171.17	gi|449067102|ref|YP_007434184.1|	-	8.7e-155	515.5	0.0	1e-154	515.3	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
DUF1487	PF07368.6	gi|449067102|ref|YP_007434184.1|	-	0.037	13.2	0.0	0.084	12.0	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1487)
PB1	PF00564.19	gi|449067102|ref|YP_007434184.1|	-	0.12	12.0	0.0	6.1	6.5	0.0	2.8	3	0	0	3	3	3	0	PB1	domain
PEPCK	PF00821.13	gi|449067103|ref|YP_007434185.1|	-	7.3e-199	661.7	0.0	8.3e-199	661.5	0.0	1.0	1	0	0	1	1	1	1	Phosphoenolpyruvate	carboxykinase
HPPK	PF01288.15	gi|449067104|ref|YP_007434186.1|	-	6.8e-34	116.3	0.0	1.1e-33	115.7	0.0	1.3	1	0	0	1	1	1	1	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase	(HPPK)
FolB	PF02152.13	gi|449067104|ref|YP_007434186.1|	-	1e-30	106.1	0.3	1.8e-30	105.4	0.2	1.4	1	0	0	1	1	1	1	Dihydroneopterin	aldolase
Prefoldin	PF02996.12	gi|449067104|ref|YP_007434186.1|	-	0.032	13.8	0.1	0.19	11.4	0.0	2.1	2	0	0	2	2	2	0	Prefoldin	subunit
IF2_assoc	PF08364.6	gi|449067104|ref|YP_007434186.1|	-	0.41	10.6	3.8	1.1	9.3	2.7	1.7	1	0	0	1	1	1	0	Bacterial	translation	initiation	factor	IF-2	associated	region
adh_short_C2	PF13561.1	gi|449067105|ref|YP_007434187.1|	-	3e-14	53.3	0.0	3.9e-14	53.0	0.0	1.1	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|449067105|ref|YP_007434187.1|	-	4.9e-10	39.5	0.0	7e-10	39.0	0.0	1.3	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|449067105|ref|YP_007434187.1|	-	0.048	13.3	0.0	0.067	12.8	0.0	1.2	1	0	0	1	1	1	0	KR	domain
HpaB_N	PF11794.3	gi|449067106|ref|YP_007434188.1|	-	1.4e-75	254.0	0.4	1.8e-75	253.7	0.3	1.1	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
HpaB	PF03241.8	gi|449067106|ref|YP_007434188.1|	-	5.2e-46	156.0	0.0	7.1e-46	155.6	0.0	1.2	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	C	terminal
adh_short_C2	PF13561.1	gi|449067107|ref|YP_007434189.1|	-	1.3e-30	106.9	0.4	1.6e-30	106.6	0.3	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|449067107|ref|YP_007434189.1|	-	5.2e-30	104.5	0.7	6.6e-30	104.2	0.5	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|449067107|ref|YP_007434189.1|	-	1.4e-09	37.8	0.2	2e-09	37.3	0.1	1.1	1	0	0	1	1	1	1	KR	domain
F420_oxidored	PF03807.12	gi|449067107|ref|YP_007434189.1|	-	0.0086	16.4	1.4	0.039	14.3	0.4	2.2	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
YjeF_N	PF03853.10	gi|449067107|ref|YP_007434189.1|	-	0.016	14.8	0.1	0.043	13.4	0.1	1.7	2	0	0	2	2	2	0	YjeF-related	protein	N-terminus
2-Hacid_dh_C	PF02826.14	gi|449067107|ref|YP_007434189.1|	-	0.048	12.8	0.2	0.08	12.0	0.2	1.4	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
DUF1847	PF08901.6	gi|449067107|ref|YP_007434189.1|	-	0.054	12.9	0.1	0.1	12.1	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1847)
Wax2_C	PF12076.3	gi|449067107|ref|YP_007434189.1|	-	0.072	12.8	0.5	0.62	9.7	0.1	2.1	2	0	0	2	2	2	0	WAX2	C-terminal	domain
DUF1972	PF09314.6	gi|449067107|ref|YP_007434189.1|	-	0.1	12.0	0.0	1.4	8.2	0.0	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1972)
Abhydrolase_3	PF07859.8	gi|449067108|ref|YP_007434190.1|	-	3.5e-62	209.7	0.0	4.2e-62	209.4	0.0	1.1	1	0	0	1	1	1	1	alpha/beta	hydrolase	fold
COesterase	PF00135.23	gi|449067108|ref|YP_007434190.1|	-	1.1e-06	27.7	0.0	4.1e-06	25.7	0.0	1.6	1	1	0	1	1	1	1	Carboxylesterase	family
Peptidase_S9	PF00326.16	gi|449067108|ref|YP_007434190.1|	-	0.00039	19.7	0.0	0.00062	19.0	0.0	1.4	1	1	0	1	1	1	1	Prolyl	oligopeptidase	family
Abhydrolase_5	PF12695.2	gi|449067108|ref|YP_007434190.1|	-	0.041	13.6	0.0	0.058	13.1	0.0	1.4	1	1	0	1	1	1	0	Alpha/beta	hydrolase	family
Abhydrolase_6	PF12697.2	gi|449067109|ref|YP_007434191.1|	-	8.7e-12	45.3	0.0	1.2e-11	45.0	0.0	1.2	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_5	PF12695.2	gi|449067109|ref|YP_007434191.1|	-	2.5e-05	24.0	0.0	3.5e-05	23.5	0.0	1.2	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|449067109|ref|YP_007434191.1|	-	0.025	14.1	0.0	0.036	13.6	0.0	1.2	1	0	0	1	1	1	0	alpha/beta	hydrolase	fold
TetR_N	PF00440.18	gi|449067110|ref|YP_007434192.1|	-	4.2e-15	55.1	0.1	7.1e-15	54.3	0.1	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	tetR	family
Luteo_PO	PF04662.8	gi|449067110|ref|YP_007434192.1|	-	0.039	13.4	0.0	0.053	12.9	0.0	1.2	1	0	0	1	1	1	0	Luteovirus	P0	protein
Acyl-CoA_dh_N	PF02771.11	gi|449067111|ref|YP_007434193.1|	-	2.8e-23	82.6	0.0	5.3e-23	81.7	0.0	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|449067111|ref|YP_007434193.1|	-	4.2e-16	58.1	0.0	7e-16	57.4	0.0	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_1	PF00441.19	gi|449067111|ref|YP_007434193.1|	-	8.4e-16	58.4	0.4	6.4e-14	52.3	0.3	2.2	1	1	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_ox_N	PF14749.1	gi|449067111|ref|YP_007434193.1|	-	0.086	13.1	0.0	0.15	12.3	0.0	1.4	1	0	0	1	1	1	0	Acyl-coenzyme	A	oxidase	N-terminal
ECH	PF00378.15	gi|449067112|ref|YP_007434194.1|	-	1.6e-70	237.0	0.0	2.4e-70	236.4	0.0	1.2	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
3HCDH_N	PF02737.13	gi|449067112|ref|YP_007434194.1|	-	1.9e-64	216.6	0.2	3.3e-64	215.8	0.1	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
3HCDH	PF00725.17	gi|449067112|ref|YP_007434194.1|	-	1.1e-43	147.5	0.1	2.4e-23	82.3	0.0	2.9	3	0	0	3	3	3	2	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
NAD_binding_2	PF03446.10	gi|449067112|ref|YP_007434194.1|	-	0.00021	21.1	0.0	0.00044	20.1	0.0	1.6	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.18	gi|449067112|ref|YP_007434194.1|	-	0.0056	16.4	0.0	0.014	15.1	0.0	1.7	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
F420_oxidored	PF03807.12	gi|449067112|ref|YP_007434194.1|	-	0.0073	16.7	0.0	0.045	14.1	0.0	2.4	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
Pyr_redox	PF00070.22	gi|449067112|ref|YP_007434194.1|	-	0.018	15.4	0.1	0.08	13.3	0.1	2.2	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
ECH_C	PF13766.1	gi|449067112|ref|YP_007434194.1|	-	0.034	14.2	0.0	0.11	12.6	0.0	1.8	1	0	0	1	1	1	0	2-enoyl-CoA	Hydratase	C-terminal	region
2-Hacid_dh_C	PF02826.14	gi|449067112|ref|YP_007434194.1|	-	0.062	12.4	0.1	0.14	11.2	0.0	1.5	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Lactamase_B	PF00753.22	gi|449067113|ref|YP_007434195.1|	-	1.6e-26	93.1	3.3	1.1e-25	90.4	2.3	2.0	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|449067113|ref|YP_007434195.1|	-	9.6e-05	22.0	0.1	0.00018	21.0	0.0	1.4	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|449067113|ref|YP_007434195.1|	-	0.0041	16.8	0.0	0.0068	16.1	0.0	1.4	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
AMP-binding	PF00501.23	gi|449067114|ref|YP_007434196.1|	-	4.8e-70	236.0	0.0	6e-70	235.7	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|449067114|ref|YP_007434196.1|	-	6.2e-16	59.1	0.1	1.6e-15	57.7	0.0	1.8	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
Ribonuc_red_sm	PF00268.16	gi|449067115|ref|YP_007434197.1|	-	1.1e-12	47.5	0.0	1.6e-12	47.0	0.0	1.1	1	0	0	1	1	1	1	Ribonucleotide	reductase,	small	chain
Rubrerythrin	PF02915.12	gi|449067115|ref|YP_007434197.1|	-	2.2e-06	28.0	0.1	0.028	14.7	0.1	2.3	2	0	0	2	2	2	2	Rubrerythrin
Haem_oxygenas_2	PF14518.1	gi|449067115|ref|YP_007434197.1|	-	0.0015	18.6	0.0	0.0031	17.6	0.0	1.5	1	0	0	1	1	1	1	Iron-containing	redox	enzyme
DUF455	PF04305.9	gi|449067115|ref|YP_007434197.1|	-	0.015	14.5	0.0	2.4	7.3	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF455)
Acyl-CoA_dh_1	PF00441.19	gi|449067116|ref|YP_007434198.1|	-	1.4e-12	47.9	0.0	2.8e-12	46.9	0.0	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_2	PF08028.6	gi|449067116|ref|YP_007434198.1|	-	0.023	14.9	0.0	0.036	14.3	0.0	1.3	1	0	0	1	1	1	0	Acyl-CoA	dehydrogenase,	C-terminal	domain
Thiolase_N	PF00108.18	gi|449067117|ref|YP_007434199.1|	-	2.8e-69	233.0	0.0	3.8e-69	232.6	0.0	1.2	1	0	0	1	1	1	1	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.13	gi|449067117|ref|YP_007434199.1|	-	1.8e-45	153.3	0.7	4.4e-45	152.0	0.3	1.8	2	0	0	2	2	2	1	Thiolase,	C-terminal	domain
ketoacyl-synt	PF00109.21	gi|449067117|ref|YP_007434199.1|	-	9.5e-06	25.2	3.4	2.2e-05	24.0	0.7	2.6	2	2	1	3	3	3	1	Beta-ketoacyl	synthase,	N-terminal	domain
SpoVAD	PF07451.6	gi|449067117|ref|YP_007434199.1|	-	0.014	13.8	0.0	0.025	13.0	0.0	1.3	1	0	0	1	1	1	0	Stage	V	sporulation	protein	AD	(SpoVAD)
ADH_N	PF08240.7	gi|449067118|ref|YP_007434200.1|	-	2.6e-28	97.9	0.2	2.2e-27	94.9	0.0	2.3	2	1	0	2	2	2	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|449067118|ref|YP_007434200.1|	-	1e-19	70.3	0.7	1.7e-19	69.6	0.5	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|449067118|ref|YP_007434200.1|	-	3.6e-09	37.5	0.2	8.7e-09	36.3	0.0	1.7	1	1	1	2	2	2	1	Zinc-binding	dehydrogenase
AlaDh_PNT_C	PF01262.16	gi|449067118|ref|YP_007434200.1|	-	0.0012	18.4	0.6	0.0053	16.3	0.9	1.7	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
SIS_2	PF13580.1	gi|449067118|ref|YP_007434200.1|	-	0.018	14.7	0.3	0.035	13.8	0.2	1.5	1	0	0	1	1	1	0	SIS	domain
Eno-Rase_NADH_b	PF12242.3	gi|449067118|ref|YP_007434200.1|	-	0.023	14.4	1.2	0.054	13.2	0.8	1.6	1	0	0	1	1	1	0	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
CMAS	PF02353.15	gi|449067118|ref|YP_007434200.1|	-	0.11	11.5	0.2	0.17	10.9	0.1	1.2	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
Abhydrolase_3	PF07859.8	gi|449067119|ref|YP_007434201.1|	-	1.9e-66	223.6	0.0	2.3e-66	223.4	0.0	1.1	1	0	0	1	1	1	1	alpha/beta	hydrolase	fold
COesterase	PF00135.23	gi|449067119|ref|YP_007434201.1|	-	1.4e-07	30.6	0.3	3.2e-07	29.4	0.2	1.5	1	1	0	1	1	1	1	Carboxylesterase	family
DUF2424	PF10340.4	gi|449067119|ref|YP_007434201.1|	-	2.5e-06	26.4	0.0	3.3e-06	25.9	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2424)
Abhydrolase_5	PF12695.2	gi|449067119|ref|YP_007434201.1|	-	1.3e-05	24.9	0.0	2e-05	24.3	0.0	1.3	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Chlorophyllase2	PF12740.2	gi|449067119|ref|YP_007434201.1|	-	0.00066	18.6	0.0	0.0011	17.9	0.0	1.3	1	0	0	1	1	1	1	Chlorophyllase	enzyme
Chlorophyllase	PF07224.6	gi|449067119|ref|YP_007434201.1|	-	0.0052	15.6	0.0	0.0071	15.1	0.0	1.2	1	0	0	1	1	1	1	Chlorophyllase
FGGY_N	PF00370.16	gi|449067120|ref|YP_007434202.1|	-	2.9e-79	265.8	0.0	4.8e-79	265.1	0.0	1.3	1	0	0	1	1	1	1	FGGY	family	of	carbohydrate	kinases,	N-terminal	domain
FGGY_C	PF02782.11	gi|449067120|ref|YP_007434202.1|	-	3.7e-57	193.1	0.0	5.8e-57	192.5	0.0	1.3	1	0	0	1	1	1	1	FGGY	family	of	carbohydrate	kinases,	C-terminal	domain
BcrAD_BadFG	PF01869.15	gi|449067120|ref|YP_007434202.1|	-	0.00015	21.2	0.5	0.092	12.0	0.0	2.2	2	0	0	2	2	2	2	BadF/BadG/BcrA/BcrD	ATPase	family
DAO	PF01266.19	gi|449067121|ref|YP_007434203.1|	-	8.5e-51	172.9	0.0	9.8e-51	172.7	0.0	1.0	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|449067121|ref|YP_007434203.1|	-	1e-06	27.8	0.2	9.2e-05	21.4	0.1	2.1	2	0	0	2	2	2	1	FAD	binding	domain
FAD_binding_3	PF01494.14	gi|449067121|ref|YP_007434203.1|	-	1.3e-05	24.4	0.4	5.7e-05	22.3	0.4	1.9	2	0	0	2	2	2	1	FAD	binding	domain
NAD_binding_8	PF13450.1	gi|449067121|ref|YP_007434203.1|	-	2.7e-05	24.1	0.4	8.2e-05	22.5	0.3	1.8	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.9	gi|449067121|ref|YP_007434203.1|	-	7.8e-05	21.3	1.3	0.0001	20.9	0.1	1.7	2	0	0	2	2	2	1	HI0933-like	protein
Pyr_redox_2	PF07992.9	gi|449067121|ref|YP_007434203.1|	-	0.00013	21.8	0.1	0.00023	21.1	0.1	1.6	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_oxidored	PF12831.2	gi|449067121|ref|YP_007434203.1|	-	0.00041	19.5	0.4	0.0012	18.0	0.3	1.7	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
Pyr_redox	PF00070.22	gi|449067121|ref|YP_007434203.1|	-	0.00069	19.9	2.1	0.0022	18.3	0.4	2.4	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
ApbA	PF02558.11	gi|449067121|ref|YP_007434203.1|	-	0.01	15.2	0.1	0.02	14.3	0.1	1.5	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
NAD_binding_7	PF13241.1	gi|449067121|ref|YP_007434203.1|	-	0.035	14.3	0.1	1.1	9.5	0.1	2.8	2	1	0	2	2	2	0	Putative	NAD(P)-binding
Thi4	PF01946.12	gi|449067121|ref|YP_007434203.1|	-	0.04	12.9	0.2	0.11	11.5	0.0	1.8	2	0	0	2	2	2	0	Thi4	family
Pyr_redox_3	PF13738.1	gi|449067121|ref|YP_007434203.1|	-	0.042	13.8	0.0	0.16	11.9	0.0	1.8	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|449067121|ref|YP_007434203.1|	-	0.073	11.9	1.4	0.12	11.2	0.4	1.7	2	0	0	2	2	2	0	Glucose	inhibited	division	protein	A
Trp_halogenase	PF04820.9	gi|449067121|ref|YP_007434203.1|	-	0.28	9.7	0.5	0.47	9.0	0.3	1.3	1	0	0	1	1	1	0	Tryptophan	halogenase
COXG	PF06240.8	gi|449067122|ref|YP_007434204.1|	-	1.9e-35	121.5	0.3	2.1e-35	121.4	0.2	1.0	1	0	0	1	1	1	1	Carbon	monoxide	dehydrogenase	subunit	G	(CoxG)
DUF3211	PF11485.3	gi|449067122|ref|YP_007434204.1|	-	0.0039	17.2	0.3	0.0046	17.0	0.2	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF3211)
DUF35_N	PF12172.3	gi|449067123|ref|YP_007434205.1|	-	5e-13	48.5	0.1	1.1e-12	47.4	0.1	1.6	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF35	PF01796.12	gi|449067123|ref|YP_007434205.1|	-	9e-12	45.0	0.2	1.4e-11	44.3	0.1	1.3	1	0	0	1	1	1	1	DUF35	OB-fold	domain
Auto_anti-p27	PF06677.7	gi|449067123|ref|YP_007434205.1|	-	0.031	14.0	4.2	0.13	12.0	3.1	1.9	1	1	1	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
TrpBP	PF02081.10	gi|449067123|ref|YP_007434205.1|	-	0.049	13.0	0.1	0.094	12.1	0.1	1.4	1	0	0	1	1	1	0	Tryptophan	RNA-binding	attenuator	protein
zf-C3HC4_3	PF13920.1	gi|449067123|ref|YP_007434205.1|	-	0.28	10.9	1.7	0.43	10.2	1.2	1.2	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
Thiolase_N	PF00108.18	gi|449067124|ref|YP_007434206.1|	-	7.1e-17	61.2	0.5	7.1e-14	51.4	0.3	2.3	2	0	0	2	2	2	2	Thiolase,	N-terminal	domain
ketoacyl-synt	PF00109.21	gi|449067124|ref|YP_007434206.1|	-	1.3e-08	34.6	1.7	1e-06	28.4	0.1	2.9	3	0	0	3	3	3	2	Beta-ketoacyl	synthase,	N-terminal	domain
Thiolase_C	PF02803.13	gi|449067124|ref|YP_007434206.1|	-	2.7e-08	33.2	0.1	2e-06	27.2	0.0	2.6	2	0	0	2	2	2	1	Thiolase,	C-terminal	domain
ACP_syn_III	PF08545.5	gi|449067124|ref|YP_007434206.1|	-	7.5e-06	25.5	0.2	0.00024	20.6	0.0	2.4	2	0	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
FAE1_CUT1_RppA	PF08392.7	gi|449067124|ref|YP_007434206.1|	-	0.011	14.7	0.0	0.02	13.9	0.0	1.3	1	0	0	1	1	1	0	FAE1/Type	III	polyketide	synthase-like	protein
DUF2048	PF09752.4	gi|449067124|ref|YP_007434206.1|	-	0.04	12.7	0.0	0.1	11.4	0.0	1.6	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2048)
AMP-binding	PF00501.23	gi|449067125|ref|YP_007434207.1|	-	2.7e-85	286.2	0.0	3.2e-85	286.0	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|449067125|ref|YP_007434207.1|	-	3.9e-16	59.7	0.0	7.2e-16	58.8	0.0	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
MFS_2	PF13347.1	gi|449067125|ref|YP_007434207.1|	-	0.088	11.1	0.1	0.13	10.6	0.1	1.1	1	0	0	1	1	1	0	MFS/sugar	transport	protein
Acyl-CoA_dh_1	PF00441.19	gi|449067126|ref|YP_007434208.1|	-	2.5e-41	141.2	4.6	4.6e-41	140.4	3.2	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.11	gi|449067126|ref|YP_007434208.1|	-	2.7e-32	111.6	0.7	9.2e-32	109.9	0.2	2.2	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|449067126|ref|YP_007434208.1|	-	1.1e-20	72.8	0.1	2.5e-20	71.7	0.1	1.6	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.6	gi|449067126|ref|YP_007434208.1|	-	2.1e-18	66.8	2.1	4.3e-18	65.8	1.5	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
RHH_3	PF12651.2	gi|449067127|ref|YP_007434209.1|	-	0.0015	18.2	2.1	0.004	16.8	1.4	1.7	1	0	0	1	1	1	1	Ribbon-helix-helix	domain
CcdA	PF07362.7	gi|449067127|ref|YP_007434209.1|	-	0.0018	18.1	0.7	0.0035	17.1	0.3	1.8	2	0	0	2	2	2	1	Post-segregation	antitoxin	CcdA
RHH_1	PF01402.16	gi|449067127|ref|YP_007434209.1|	-	0.023	14.5	1.1	0.072	13.0	0.7	1.8	1	0	0	1	1	1	0	Ribbon-helix-helix	protein,	copG	family
AhpC-TSA	PF00578.16	gi|449067128|ref|YP_007434210.1|	-	7.5e-38	129.0	0.1	9.1e-38	128.7	0.1	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|449067128|ref|YP_007434210.1|	-	7e-26	90.5	0.0	8.3e-26	90.2	0.0	1.0	1	0	0	1	1	1	1	Redoxin
SCO1-SenC	PF02630.9	gi|449067128|ref|YP_007434210.1|	-	0.11	12.1	0.2	0.63	9.6	0.0	2.0	2	0	0	2	2	2	0	SCO1/SenC
AMP-binding	PF00501.23	gi|449067129|ref|YP_007434211.1|	-	2.3e-68	230.5	0.0	2.8e-68	230.2	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|449067129|ref|YP_007434211.1|	-	2.5e-17	63.5	0.0	5.1e-17	62.5	0.0	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
ELK	PF03789.8	gi|449067129|ref|YP_007434211.1|	-	0.95	9.3	4.9	3.3	7.6	0.3	2.5	2	0	0	2	2	2	0	ELK	domain
AA_permease_2	PF13520.1	gi|449067130|ref|YP_007434212.1|	-	3.2e-41	141.2	62.8	3.2e-41	141.2	43.5	3.0	1	1	2	3	3	3	2	Amino	acid	permease
AA_permease	PF00324.16	gi|449067130|ref|YP_007434212.1|	-	6e-31	107.3	59.2	6e-31	107.3	41.1	2.3	1	1	1	2	2	2	1	Amino	acid	permease
DUF87	PF01935.12	gi|449067131|ref|YP_007434213.1|	-	5.1e-29	101.7	0.2	1.3e-28	100.4	0.0	1.7	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF87
AAA_10	PF12846.2	gi|449067131|ref|YP_007434213.1|	-	1.2e-22	80.7	0.5	2.2e-20	73.3	0.3	2.3	1	1	0	1	1	1	1	AAA-like	domain
AAA	PF00004.24	gi|449067131|ref|YP_007434213.1|	-	1.4e-08	34.9	0.9	1.6e-05	25.1	0.1	2.3	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
TrwB_AAD_bind	PF10412.4	gi|449067131|ref|YP_007434213.1|	-	5.9e-08	31.7	0.1	1.3e-07	30.5	0.0	1.5	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
DUF853	PF05872.7	gi|449067131|ref|YP_007434213.1|	-	1.2e-06	27.1	0.2	0.002	16.5	0.0	2.4	2	1	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
AAA_22	PF13401.1	gi|449067131|ref|YP_007434213.1|	-	2.9e-06	27.4	0.3	0.02	15.0	0.0	2.7	3	0	0	3	3	2	2	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|449067131|ref|YP_007434213.1|	-	3.2e-06	26.7	0.0	0.00031	20.2	0.0	2.3	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
AAA_14	PF13173.1	gi|449067131|ref|YP_007434213.1|	-	5.4e-05	23.0	1.4	0.086	12.7	0.1	2.7	2	1	1	3	3	3	2	AAA	domain
DEAD	PF00270.24	gi|449067131|ref|YP_007434213.1|	-	0.00016	21.1	0.0	0.035	13.5	0.0	2.3	1	1	0	1	1	1	1	DEAD/DEAH	box	helicase
AAA_15	PF13175.1	gi|449067131|ref|YP_007434213.1|	-	0.00065	18.8	0.7	0.13	11.3	0.1	2.4	2	1	0	2	2	2	1	AAA	ATPase	domain
Zot	PF05707.7	gi|449067131|ref|YP_007434213.1|	-	0.00076	18.9	0.6	0.0017	17.8	0.0	1.8	2	0	0	2	2	2	1	Zonular	occludens	toxin	(Zot)
T2SE	PF00437.15	gi|449067131|ref|YP_007434213.1|	-	0.00084	18.3	0.2	0.002	17.0	0.1	1.6	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
NACHT	PF05729.7	gi|449067131|ref|YP_007434213.1|	-	0.00093	18.8	0.6	0.067	12.8	0.0	2.4	2	0	0	2	2	2	1	NACHT	domain
ABC_tran	PF00005.22	gi|449067131|ref|YP_007434213.1|	-	0.0016	18.7	0.0	0.0035	17.6	0.0	1.6	1	0	0	1	1	1	1	ABC	transporter
AAA_25	PF13481.1	gi|449067131|ref|YP_007434213.1|	-	0.0022	17.4	0.0	2.3	7.5	0.0	2.3	2	0	0	2	2	2	2	AAA	domain
AAA_21	PF13304.1	gi|449067131|ref|YP_007434213.1|	-	0.0066	16.4	1.9	0.051	13.5	0.0	2.8	2	1	0	2	2	2	1	AAA	domain
AAA_29	PF13555.1	gi|449067131|ref|YP_007434213.1|	-	0.0069	15.8	0.1	0.015	14.8	0.1	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
G-alpha	PF00503.15	gi|449067131|ref|YP_007434213.1|	-	0.013	14.2	0.1	0.025	13.3	0.1	1.4	1	0	0	1	1	1	0	G-protein	alpha	subunit
ResIII	PF04851.10	gi|449067131|ref|YP_007434213.1|	-	0.014	15.2	0.2	0.89	9.3	0.0	2.4	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
Sigma54_activat	PF00158.21	gi|449067131|ref|YP_007434213.1|	-	0.016	14.6	0.1	0.13	11.7	0.0	2.1	2	0	0	2	2	2	0	Sigma-54	interaction	domain
Septin	PF00735.13	gi|449067131|ref|YP_007434213.1|	-	0.016	14.2	0.1	0.028	13.4	0.0	1.3	1	0	0	1	1	1	0	Septin
AAA_16	PF13191.1	gi|449067131|ref|YP_007434213.1|	-	0.021	14.8	0.0	0.079	12.9	0.0	1.9	2	1	0	2	2	2	0	AAA	ATPase	domain
Pox_A32	PF04665.7	gi|449067131|ref|YP_007434213.1|	-	0.025	13.8	1.7	0.045	13.0	0.1	2.1	2	0	0	2	2	2	0	Poxvirus	A32	protein
Miro	PF08477.8	gi|449067131|ref|YP_007434213.1|	-	0.034	14.6	0.1	0.091	13.2	0.1	1.8	1	0	0	1	1	1	0	Miro-like	protein
DUF2075	PF09848.4	gi|449067131|ref|YP_007434213.1|	-	0.038	12.9	0.1	1.3	7.8	0.0	2.1	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
RuvB_N	PF05496.7	gi|449067131|ref|YP_007434213.1|	-	0.038	13.0	0.0	0.15	11.1	0.0	1.8	2	0	0	2	2	2	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
Gtr1_RagA	PF04670.7	gi|449067131|ref|YP_007434213.1|	-	0.041	13.0	0.1	0.096	11.8	0.0	1.6	1	0	0	1	1	1	0	Gtr1/RagA	G	protein	conserved	region
cobW	PF02492.14	gi|449067131|ref|YP_007434213.1|	-	0.046	13.1	0.0	0.091	12.2	0.0	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
PduV-EutP	PF10662.4	gi|449067131|ref|YP_007434213.1|	-	0.073	12.5	0.1	0.18	11.2	0.1	1.7	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_33	PF13671.1	gi|449067131|ref|YP_007434213.1|	-	0.1	12.4	0.0	0.34	10.7	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
AAA_17	PF13207.1	gi|449067131|ref|YP_007434213.1|	-	0.12	13.1	0.0	0.29	11.9	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
Baculo_19	PF04798.7	gi|449067131|ref|YP_007434213.1|	-	0.2	11.0	2.2	0.39	10.0	0.7	1.9	1	1	1	2	2	2	0	Baculovirus	19	kDa	protein	conserved	region
AAA_23	PF13476.1	gi|449067131|ref|YP_007434213.1|	-	0.43	10.8	6.2	1.1	9.4	4.2	1.9	1	1	0	1	1	1	0	AAA	domain
NurA	PF09376.5	gi|449067132|ref|YP_007434214.1|	-	5.2e-22	78.5	0.7	6.5e-22	78.2	0.5	1.1	1	0	0	1	1	1	1	NurA	domain
Phosphoesterase	PF04185.9	gi|449067134|ref|YP_007434216.1|	-	3.9e-72	243.5	4.7	1e-71	242.1	3.3	1.6	1	1	0	1	1	1	1	Phosphoesterase	family
Clathrin_propel	PF01394.15	gi|449067134|ref|YP_007434216.1|	-	0.21	11.9	1.6	4.9	7.6	0.0	3.0	3	0	0	3	3	3	0	Clathrin	propeller	repeat
Metallophos_2	PF12850.2	gi|449067135|ref|YP_007434217.1|	-	7.1e-10	38.9	0.0	9.4e-10	38.5	0.0	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|449067135|ref|YP_007434217.1|	-	1.1e-06	28.2	0.1	2.3e-06	27.1	0.1	1.5	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_3	PF14582.1	gi|449067135|ref|YP_007434217.1|	-	0.00022	20.4	0.1	0.00043	19.5	0.0	1.5	2	0	0	2	2	2	1	Metallophosphoesterase,	calcineurin	superfamily
Arch_ATPase	PF01637.13	gi|449067136|ref|YP_007434218.1|	-	9.9e-26	90.8	0.4	1.5e-25	90.2	0.0	1.5	2	0	0	2	2	2	1	Archaeal	ATPase
AAA_14	PF13173.1	gi|449067136|ref|YP_007434218.1|	-	1.4e-07	31.4	0.3	1.4e-05	24.9	0.0	3.1	2	2	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|449067136|ref|YP_007434218.1|	-	3.5e-07	30.4	0.1	8.8e-07	29.1	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|449067136|ref|YP_007434218.1|	-	3.2e-06	27.2	0.0	7.7e-06	26.0	0.0	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
NTPase_1	PF03266.10	gi|449067136|ref|YP_007434218.1|	-	0.012	15.3	0.0	0.021	14.5	0.0	1.5	1	0	0	1	1	1	0	NTPase
T2SE	PF00437.15	gi|449067136|ref|YP_007434218.1|	-	0.035	12.9	0.0	0.06	12.2	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
DUF815	PF05673.8	gi|449067136|ref|YP_007434218.1|	-	0.052	12.4	0.1	0.1	11.4	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
DUF4423	PF14394.1	gi|449067136|ref|YP_007434218.1|	-	0.082	12.4	0.0	0.14	11.7	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
Mrr_N	PF14338.1	gi|449067136|ref|YP_007434218.1|	-	0.095	12.8	0.1	0.18	11.8	0.0	1.4	1	0	0	1	1	1	0	Mrr	N-terminal	domain
DUF258	PF03193.11	gi|449067136|ref|YP_007434218.1|	-	0.1	11.7	0.1	0.2	10.8	0.1	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA	PF00004.24	gi|449067136|ref|YP_007434218.1|	-	0.12	12.6	0.0	0.26	11.4	0.0	1.7	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Zeta_toxin	PF06414.7	gi|449067136|ref|YP_007434218.1|	-	0.12	11.4	0.0	0.32	10.0	0.0	1.6	2	0	0	2	2	2	0	Zeta	toxin
ECH	PF00378.15	gi|449067137|ref|YP_007434219.1|	-	1.2e-66	224.3	0.0	1.8e-66	223.7	0.0	1.3	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
3HCDH_N	PF02737.13	gi|449067137|ref|YP_007434219.1|	-	4.6e-63	212.1	0.3	7.9e-63	211.3	0.2	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
3HCDH	PF00725.17	gi|449067137|ref|YP_007434219.1|	-	4.4e-45	152.0	0.1	6.8e-23	80.8	0.0	2.7	2	0	0	2	2	2	2	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
NAD_Gly3P_dh_N	PF01210.18	gi|449067137|ref|YP_007434219.1|	-	4.3e-05	23.2	0.1	0.00036	20.3	0.0	2.3	2	0	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
NAD_binding_2	PF03446.10	gi|449067137|ref|YP_007434219.1|	-	0.0012	18.6	0.0	0.0031	17.3	0.0	1.8	1	1	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
ECH_C	PF13766.1	gi|449067137|ref|YP_007434219.1|	-	0.0015	18.6	0.1	0.0041	17.2	0.0	1.7	1	0	0	1	1	1	1	2-enoyl-CoA	Hydratase	C-terminal	region
NAD_binding_7	PF13241.1	gi|449067137|ref|YP_007434219.1|	-	0.018	15.3	0.0	0.073	13.3	0.0	2.0	2	0	0	2	2	2	0	Putative	NAD(P)-binding
Pyr_redox	PF00070.22	gi|449067137|ref|YP_007434219.1|	-	0.025	14.9	0.3	0.12	12.7	0.0	2.3	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
F420_oxidored	PF03807.12	gi|449067137|ref|YP_007434219.1|	-	0.029	14.8	0.5	0.15	12.5	0.0	2.6	3	0	0	3	3	3	0	NADP	oxidoreductase	coenzyme	F420-dependent
Trehalose_PPase	PF02358.11	gi|449067137|ref|YP_007434219.1|	-	0.095	11.5	0.0	0.17	10.7	0.0	1.3	1	0	0	1	1	1	0	Trehalose-phosphatase
ThiF	PF00899.16	gi|449067137|ref|YP_007434219.1|	-	0.11	12.3	0.9	0.44	10.3	0.6	2.0	1	1	0	1	1	1	0	ThiF	family
Sugar_tr	PF00083.19	gi|449067138|ref|YP_007434220.1|	-	1.2e-40	139.4	27.6	1.5e-40	139.1	19.2	1.0	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|449067138|ref|YP_007434220.1|	-	3.9e-29	101.4	46.8	9.1e-25	87.1	18.6	2.2	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
TPP_enzyme_N	PF02776.13	gi|449067139|ref|YP_007434221.1|	-	1.2e-43	148.5	0.0	4.7e-43	146.6	0.0	1.9	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.17	gi|449067139|ref|YP_007434221.1|	-	6.8e-36	123.0	0.0	1.3e-35	122.1	0.0	1.5	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
TPP_enzyme_C	PF02775.16	gi|449067139|ref|YP_007434221.1|	-	7.1e-25	87.3	0.0	7.7e-24	83.9	0.0	2.7	2	1	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
CO_dh	PF02552.11	gi|449067139|ref|YP_007434221.1|	-	0.027	14.0	0.0	0.093	12.2	0.0	1.8	2	0	0	2	2	2	0	CO	dehydrogenase	beta	subunit/acetyl-CoA	synthase	epsilon	subunit
CENP-B_N	PF04218.8	gi|449067139|ref|YP_007434221.1|	-	0.029	13.7	0.7	0.067	12.6	0.5	1.6	1	0	0	1	1	1	0	CENP-B	N-terminal	DNA-binding	domain
VKOR	PF07884.9	gi|449067140|ref|YP_007434222.1|	-	4.1e-25	88.2	17.6	7.6e-25	87.3	12.2	1.4	1	1	0	1	1	1	1	Vitamin	K	epoxide	reductase	family
PRT_C	PF08372.5	gi|449067140|ref|YP_007434222.1|	-	0.078	12.4	1.5	0.15	11.5	1.0	1.5	1	0	0	1	1	1	0	Plant	phosphoribosyltransferase	C-terminal
OppC_N	PF12911.2	gi|449067140|ref|YP_007434222.1|	-	0.08	12.3	4.0	3.9	6.9	0.1	2.6	2	0	0	2	2	2	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
SPW	PF03779.9	gi|449067140|ref|YP_007434222.1|	-	0.8	9.1	10.9	0.11	11.8	3.9	2.4	2	1	1	3	3	3	0	SPW	repeat
Radical_SAM	PF04055.16	gi|449067144|ref|YP_007434226.1|	-	3.3e-10	40.3	0.0	4.5e-10	39.9	0.0	1.2	1	0	0	1	1	1	1	Radical	SAM	superfamily
DUF1848	PF08902.6	gi|449067144|ref|YP_007434226.1|	-	0.066	12.7	3.9	2.2	7.7	2.7	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1848)
DUF650	PF04894.7	gi|449067145|ref|YP_007434227.1|	-	2.7e-100	335.3	0.0	3.8e-100	334.8	0.0	1.2	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF650)
DUF651	PF04895.7	gi|449067145|ref|YP_007434227.1|	-	2.2e-40	136.6	0.1	5.2e-40	135.5	0.0	1.6	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF651)
LigB	PF02900.13	gi|449067146|ref|YP_007434228.1|	-	1.2e-21	76.9	0.0	1.3e-21	76.7	0.0	1.0	1	0	0	1	1	1	1	Catalytic	LigB	subunit	of	aromatic	ring-opening	dioxygenase
Ald_Xan_dh_C2	PF02738.13	gi|449067147|ref|YP_007434229.1|	-	4.9e-05	21.8	0.0	5.1e-05	21.7	0.0	1.0	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Peptidase_S8	PF00082.17	gi|449067148|ref|YP_007434230.1|	-	2.9e-12	46.3	0.3	1.1e-11	44.3	0.1	2.1	2	0	0	2	2	2	1	Subtilase	family
Pro-kuma_activ	PF09286.6	gi|449067148|ref|YP_007434230.1|	-	9.4e-12	45.1	0.1	5.1e-11	42.7	0.0	2.2	2	0	0	2	2	2	1	Pro-kumamolisin,	activation	domain
A2M_N	PF01835.14	gi|449067148|ref|YP_007434230.1|	-	0.00028	21.0	0.7	1.2	9.3	0.0	4.3	5	0	0	5	5	5	2	MG2	domain
FlgD_ig	PF13860.1	gi|449067148|ref|YP_007434230.1|	-	0.0027	17.4	1.5	0.93	9.2	0.0	4.8	5	0	0	5	5	5	1	FlgD	Ig-like	domain
PNGaseA	PF12222.3	gi|449067149|ref|YP_007434231.1|	-	1.3e-136	455.9	15.1	1.7e-136	455.5	10.5	1.2	1	0	0	1	1	1	1	Peptide	N-acetyl-beta-D-glucosaminyl	asparaginase	amidase	A
AMP-binding	PF00501.23	gi|449067150|ref|YP_007434232.1|	-	1.1e-74	251.3	0.0	1.4e-74	250.9	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|449067150|ref|YP_007434232.1|	-	6.5e-22	78.2	0.3	1.2e-21	77.4	0.2	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
tRNA_edit	PF04073.10	gi|449067151|ref|YP_007434233.1|	-	4.5e-28	97.5	0.0	5.3e-28	97.3	0.0	1.1	1	0	0	1	1	1	1	Aminoacyl-tRNA	editing	domain
RRF	PF01765.14	gi|449067152|ref|YP_007434234.1|	-	0.0047	16.4	1.8	0.0052	16.2	1.3	1.0	1	0	0	1	1	1	1	Ribosome	recycling	factor
GvpK	PF05121.7	gi|449067152|ref|YP_007434234.1|	-	0.018	14.8	1.9	0.021	14.6	1.3	1.2	1	0	0	1	1	1	0	Gas	vesicle	protein	K
CorA	PF01544.13	gi|449067152|ref|YP_007434234.1|	-	0.023	13.7	3.7	0.15	11.0	0.7	2.0	1	1	1	2	2	2	0	CorA-like	Mg2+	transporter	protein
AcylCoA_dehyd_C	PF12186.3	gi|449067152|ref|YP_007434234.1|	-	0.029	14.2	0.3	0.037	13.8	0.2	1.2	1	1	0	1	1	1	0	Acyl-CoA	dehydrogenase	C	terminal
DUF3391	PF11871.3	gi|449067152|ref|YP_007434234.1|	-	0.045	13.9	0.1	0.051	13.7	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3391)
DUF552	PF04472.7	gi|449067152|ref|YP_007434234.1|	-	0.049	13.5	0.4	3.1	7.7	0.0	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF552)
YtxH	PF12732.2	gi|449067152|ref|YP_007434234.1|	-	0.06	13.7	0.9	0.064	13.6	0.6	1.3	1	1	0	1	1	1	0	YtxH-like	protein
Nup88	PF10168.4	gi|449067152|ref|YP_007434234.1|	-	0.068	11.0	0.6	0.07	10.9	0.4	1.0	1	0	0	1	1	1	0	Nuclear	pore	component
DUF2935	PF11155.3	gi|449067152|ref|YP_007434234.1|	-	0.077	13.0	0.0	0.087	12.9	0.0	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF2935)
LemA	PF04011.7	gi|449067152|ref|YP_007434234.1|	-	0.078	12.0	0.1	0.078	12.0	0.1	1.0	1	0	0	1	1	1	0	LemA	family
DUF4279	PF14106.1	gi|449067152|ref|YP_007434234.1|	-	0.078	12.8	4.1	1.9	8.3	0.2	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4279)
IncA	PF04156.9	gi|449067152|ref|YP_007434234.1|	-	0.081	12.5	0.8	0.086	12.4	0.6	1.0	1	0	0	1	1	1	0	IncA	protein
Baculo_PEP_C	PF04513.7	gi|449067152|ref|YP_007434234.1|	-	0.084	12.6	0.1	0.093	12.5	0.1	1.1	1	0	0	1	1	1	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Syntaxin	PF00804.20	gi|449067152|ref|YP_007434234.1|	-	0.084	13.0	0.7	0.097	12.8	0.5	1.1	1	0	0	1	1	1	0	Syntaxin
Sec34	PF04136.10	gi|449067152|ref|YP_007434234.1|	-	0.088	12.5	0.4	0.11	12.2	0.3	1.3	1	1	0	1	1	1	0	Sec34-like	family
DUF1342	PF07072.6	gi|449067152|ref|YP_007434234.1|	-	0.093	12.3	0.8	0.1	12.2	0.6	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1342)
DegS	PF05384.6	gi|449067152|ref|YP_007434234.1|	-	0.1	11.8	1.5	0.14	11.3	0.8	1.5	1	1	0	1	1	1	0	Sensor	protein	DegS
LXG	PF04740.7	gi|449067152|ref|YP_007434234.1|	-	0.11	12.3	0.9	0.11	12.2	0.7	1.2	1	0	0	1	1	1	0	LXG	domain	of	WXG	superfamily
Pox_I1	PF03289.8	gi|449067152|ref|YP_007434234.1|	-	0.12	11.2	2.7	0.11	11.3	1.9	1.0	1	0	0	1	1	1	0	Poxvirus	protein	I1
Prefoldin	PF02996.12	gi|449067152|ref|YP_007434234.1|	-	0.27	10.8	2.6	0.3	10.7	1.1	1.7	1	1	1	2	2	2	0	Prefoldin	subunit
DUF1664	PF07889.7	gi|449067152|ref|YP_007434234.1|	-	0.28	10.9	2.5	0.33	10.7	1.7	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
Adaptin_binding	PF10199.4	gi|449067152|ref|YP_007434234.1|	-	0.28	11.4	2.9	0.39	11.0	2.0	1.3	1	1	0	1	1	1	0	Alpha	and	gamma	adaptin	binding	protein	p34
Osmo_CC	PF08946.5	gi|449067152|ref|YP_007434234.1|	-	0.35	10.9	9.7	0.14	12.2	4.9	1.7	1	1	1	2	2	2	0	Osmosensory	transporter	coiled	coil
FlaC_arch	PF05377.6	gi|449067152|ref|YP_007434234.1|	-	0.36	10.7	2.5	0.5	10.2	1.0	1.7	2	0	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
Orthopox_A5L	PF06193.6	gi|449067152|ref|YP_007434234.1|	-	0.36	10.7	2.1	0.37	10.7	1.5	1.1	1	0	0	1	1	1	0	Orthopoxvirus	A5L	protein-like
HisKA	PF00512.20	gi|449067152|ref|YP_007434234.1|	-	0.55	10.2	2.8	0.39	10.7	0.7	1.7	1	1	1	2	2	2	0	His	Kinase	A	(phospho-acceptor)	domain
Snf7	PF03357.16	gi|449067152|ref|YP_007434234.1|	-	1.8	7.9	5.2	2.4	7.5	3.6	1.4	1	1	0	1	1	1	0	Snf7
NAD_binding_10	PF13460.1	gi|449067153|ref|YP_007434235.1|	-	4.8e-10	39.7	0.0	5.8e-10	39.4	0.0	1.1	1	0	0	1	1	1	1	NADH(P)-binding
Epimerase	PF01370.16	gi|449067153|ref|YP_007434235.1|	-	2.4e-07	30.4	0.0	7.7e-07	28.7	0.0	1.7	1	1	1	2	2	2	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|449067153|ref|YP_007434235.1|	-	7.1e-07	28.4	0.0	4.9e-06	25.6	0.0	2.0	1	1	0	1	1	1	1	RmlD	substrate	binding	domain
3Beta_HSD	PF01073.14	gi|449067153|ref|YP_007434235.1|	-	9e-06	24.5	0.0	3.2e-05	22.7	0.0	1.7	1	1	1	2	2	2	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
NmrA	PF05368.8	gi|449067153|ref|YP_007434235.1|	-	2e-05	23.9	0.0	3.2e-05	23.3	0.0	1.4	1	1	0	1	1	1	1	NmrA-like	family
DapB_N	PF01113.15	gi|449067153|ref|YP_007434235.1|	-	0.0056	16.5	0.0	0.0095	15.8	0.0	1.4	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
NAD_binding_2	PF03446.10	gi|449067153|ref|YP_007434235.1|	-	0.071	12.9	0.0	0.093	12.5	0.0	1.2	1	0	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
GATase	PF00117.23	gi|449067154|ref|YP_007434236.1|	-	1.2e-20	73.8	0.0	1.6e-20	73.3	0.0	1.1	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|449067154|ref|YP_007434236.1|	-	4.2e-06	26.3	0.1	1.3e-05	24.7	0.0	1.8	2	1	0	2	2	2	1	Peptidase	C26
HTS	PF04204.11	gi|449067154|ref|YP_007434236.1|	-	0.037	12.7	0.0	0.049	12.3	0.0	1.3	1	1	0	1	1	1	0	Homoserine	O-succinyltransferase
GATase_3	PF07685.9	gi|449067154|ref|YP_007434236.1|	-	0.11	12.0	0.0	0.19	11.3	0.0	1.4	1	0	0	1	1	1	0	CobB/CobQ-like	glutamine	amidotransferase	domain
ADC	PF06314.6	gi|449067155|ref|YP_007434237.1|	-	4.5e-57	193.1	0.0	5.6e-57	192.7	0.0	1.0	1	0	0	1	1	1	1	Acetoacetate	decarboxylase	(ADC)
NikR_C	PF08753.6	gi|449067156|ref|YP_007434238.1|	-	0.12	12.2	0.1	0.38	10.6	0.0	1.9	2	0	0	2	2	2	0	NikR	C	terminal	nickel	binding	domain
L27	PF02828.11	gi|449067157|ref|YP_007434239.1|	-	0.11	12.2	0.0	0.36	10.5	0.0	1.9	1	0	0	1	1	1	0	L27	domain
YppG	PF14179.1	gi|449067157|ref|YP_007434239.1|	-	0.23	12.1	2.0	0.56	10.8	0.2	2.2	2	0	0	2	2	2	0	YppG-like	protein
Methyltransf_24	PF13578.1	gi|449067160|ref|YP_007434242.1|	-	3.1e-13	50.4	0.0	4.3e-13	50.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_3	PF01596.12	gi|449067160|ref|YP_007434242.1|	-	1.3e-06	27.6	0.0	1.6e-06	27.3	0.0	1.1	1	0	0	1	1	1	1	O-methyltransferase
CmcI	PF04989.7	gi|449067160|ref|YP_007434242.1|	-	7.2e-06	25.4	0.0	1e-05	24.9	0.0	1.2	1	0	0	1	1	1	1	Cephalosporin	hydroxylase
TylF	PF05711.6	gi|449067160|ref|YP_007434242.1|	-	0.00033	19.8	0.0	0.00068	18.7	0.0	1.6	1	1	1	2	2	2	1	Macrocin-O-methyltransferase	(TylF)
Glyco_hydro_31	PF01055.21	gi|449067162|ref|YP_007434244.1|	-	9.1e-133	443.2	1.8	1.2e-132	442.9	1.2	1.1	1	0	0	1	1	1	1	Glycosyl	hydrolases	family	31
Gal_mutarotas_2	PF13802.1	gi|449067162|ref|YP_007434244.1|	-	2.7e-17	62.3	0.1	8.2e-17	60.8	0.1	1.9	1	0	0	1	1	1	1	Galactose	mutarotase-like
Retrotrans_gag	PF03732.12	gi|449067162|ref|YP_007434244.1|	-	0.067	13.2	0.1	0.16	12.0	0.1	1.6	1	0	0	1	1	1	0	Retrotransposon	gag	protein
V-ATPase_C	PF03223.10	gi|449067162|ref|YP_007434244.1|	-	0.11	11.3	0.0	0.14	11.0	0.0	1.1	1	0	0	1	1	1	0	V-ATPase	subunit	C
NMO	PF03060.10	gi|449067162|ref|YP_007434244.1|	-	0.15	11.2	0.0	0.25	10.4	0.0	1.3	1	0	0	1	1	1	0	Nitronate	monooxygenase
Regulator_TrmB	PF11495.3	gi|449067163|ref|YP_007434245.1|	-	4.3e-66	222.2	1.9	5.3e-66	221.9	1.4	1.1	1	0	0	1	1	1	1	Archaeal	transcriptional	regulator	TrmB
TrmB	PF01978.14	gi|449067163|ref|YP_007434245.1|	-	1.5e-13	50.1	0.2	3.6e-13	49.0	0.1	1.7	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.17	gi|449067163|ref|YP_007434245.1|	-	0.026	14.2	0.0	0.057	13.1	0.0	1.6	1	0	0	1	1	1	0	MarR	family
Glyco_hydro_57	PF03065.10	gi|449067164|ref|YP_007434246.1|	-	1.1e-46	159.3	4.3	2.5e-46	158.2	3.0	1.6	1	1	0	1	1	1	1	Glycosyl	hydrolase	family	57
BPD_transp_1	PF00528.17	gi|449067165|ref|YP_007434247.1|	-	9.7e-15	54.5	22.4	9.7e-15	54.5	15.5	2.2	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.17	gi|449067166|ref|YP_007434248.1|	-	3.3e-16	59.3	23.2	3.3e-16	59.3	16.0	2.1	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
SoxE	PF06525.6	gi|449067167|ref|YP_007434249.1|	-	0.00025	20.3	4.0	0.00025	20.3	2.8	2.1	2	0	0	2	2	2	1	Sulfocyanin	(SoxE)
DUF1510	PF07423.6	gi|449067167|ref|YP_007434249.1|	-	0.0043	16.4	0.0	0.0061	15.9	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1510)
SP_C-Propep	PF08999.5	gi|449067167|ref|YP_007434249.1|	-	0.017	14.6	0.5	0.031	13.7	0.4	1.4	1	0	0	1	1	1	0	Surfactant	protein	C,	N	terminal	propeptide
Shisa	PF13908.1	gi|449067167|ref|YP_007434249.1|	-	0.056	13.6	0.5	0.13	12.3	0.3	1.6	1	0	0	1	1	1	0	Wnt	and	FGF	inhibitory	regulator
PLDc_N	PF13396.1	gi|449067167|ref|YP_007434249.1|	-	0.062	12.9	0.4	0.062	12.9	0.2	1.7	2	0	0	2	2	2	0	Phospholipase_D-nuclease	N-terminal
SpoIIIAH	PF12685.2	gi|449067167|ref|YP_007434249.1|	-	0.068	12.6	0.2	0.068	12.6	0.1	1.6	2	0	0	2	2	2	0	SpoIIIAH-like	protein
DUF2116	PF09889.4	gi|449067167|ref|YP_007434249.1|	-	0.095	12.5	0.5	0.17	11.6	0.4	1.4	1	0	0	1	1	1	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
ODV-E18	PF10717.4	gi|449067167|ref|YP_007434249.1|	-	1.7	8.1	7.0	11	5.5	5.1	2.2	2	1	0	2	2	2	0	Occlusion-derived	virus	envelope	protein	ODV-E18
ABC_tran	PF00005.22	gi|449067168|ref|YP_007434250.1|	-	2.2e-33	115.4	0.0	4.5e-33	114.4	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|449067168|ref|YP_007434250.1|	-	1.2e-08	35.3	0.0	0.00019	21.5	0.0	2.5	1	1	0	2	2	2	2	AAA	domain
TOBE_2	PF08402.5	gi|449067168|ref|YP_007434250.1|	-	5.8e-08	32.6	0.0	1.4e-07	31.3	0.0	1.7	1	0	0	1	1	1	1	TOBE	domain
AAA_15	PF13175.1	gi|449067168|ref|YP_007434250.1|	-	5.8e-07	28.9	0.0	0.00065	18.8	0.0	2.2	2	0	0	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|449067168|ref|YP_007434250.1|	-	7.2e-06	25.3	0.9	0.00013	21.2	0.6	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
Arch_ATPase	PF01637.13	gi|449067168|ref|YP_007434250.1|	-	0.00048	19.9	0.1	0.0019	17.9	0.0	2.0	2	0	0	2	2	2	1	Archaeal	ATPase
DUF258	PF03193.11	gi|449067168|ref|YP_007434250.1|	-	0.002	17.3	0.1	0.0051	16.0	0.0	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
ABC_ATPase	PF09818.4	gi|449067168|ref|YP_007434250.1|	-	0.0038	15.8	0.6	1.8	7.0	0.0	2.9	2	1	0	2	2	2	2	Predicted	ATPase	of	the	ABC	class
AAA_14	PF13173.1	gi|449067168|ref|YP_007434250.1|	-	0.0046	16.8	0.1	0.04	13.8	0.0	2.6	3	0	0	3	3	3	1	AAA	domain
Rad17	PF03215.10	gi|449067168|ref|YP_007434250.1|	-	0.0056	15.4	0.0	0.0073	15.0	0.0	1.1	1	0	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
AAA_19	PF13245.1	gi|449067168|ref|YP_007434250.1|	-	0.0071	16.0	0.0	0.022	14.5	0.0	1.8	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_16	PF13191.1	gi|449067168|ref|YP_007434250.1|	-	0.015	15.3	0.2	0.027	14.4	0.1	1.6	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_25	PF13481.1	gi|449067168|ref|YP_007434250.1|	-	0.015	14.7	0.0	0.28	10.5	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
AAA_23	PF13476.1	gi|449067168|ref|YP_007434250.1|	-	0.023	15.0	0.1	0.023	15.0	0.1	2.4	3	0	0	3	3	2	0	AAA	domain
AAA_22	PF13401.1	gi|449067168|ref|YP_007434250.1|	-	0.024	14.7	1.1	0.19	11.8	0.8	2.1	1	1	0	1	1	1	0	AAA	domain
T2SE	PF00437.15	gi|449067168|ref|YP_007434250.1|	-	0.026	13.4	0.0	0.047	12.6	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_29	PF13555.1	gi|449067168|ref|YP_007434250.1|	-	0.028	13.9	0.1	0.063	12.8	0.1	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
NACHT	PF05729.7	gi|449067168|ref|YP_007434250.1|	-	0.037	13.6	0.2	0.09	12.4	0.0	1.7	2	0	0	2	2	2	0	NACHT	domain
AAA_24	PF13479.1	gi|449067168|ref|YP_007434250.1|	-	0.04	13.5	0.1	0.61	9.6	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
NTPase_1	PF03266.10	gi|449067168|ref|YP_007434250.1|	-	0.046	13.4	0.0	4.8	6.8	0.0	2.5	2	0	0	2	2	2	0	NTPase
AAA_17	PF13207.1	gi|449067168|ref|YP_007434250.1|	-	0.048	14.4	0.4	0.37	11.6	0.1	2.4	1	1	1	2	2	2	0	AAA	domain
IstB_IS21	PF01695.12	gi|449067168|ref|YP_007434250.1|	-	0.061	12.7	0.0	0.12	11.7	0.0	1.5	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
FtsK_SpoIIIE	PF01580.13	gi|449067168|ref|YP_007434250.1|	-	0.12	11.8	0.0	0.23	10.9	0.0	1.4	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
AAA_28	PF13521.1	gi|449067168|ref|YP_007434250.1|	-	0.16	11.9	0.0	0.37	10.7	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
CBS	PF00571.23	gi|449067169|ref|YP_007434251.1|	-	2e-32	110.7	4.5	6.6e-16	57.8	0.2	2.1	2	0	0	2	2	2	2	CBS	domain
YopE	PF03545.8	gi|449067169|ref|YP_007434251.1|	-	0.0051	16.7	0.0	0.013	15.4	0.0	1.7	1	0	0	1	1	1	1	Yersinia	virulence	determinant	(YopE)
DisA_N	PF02457.11	gi|449067169|ref|YP_007434251.1|	-	0.053	12.6	0.0	0.094	11.8	0.0	1.4	1	0	0	1	1	1	0	DisA	bacterial	checkpoint	controller	nucleotide-binding
Sigma70_r3	PF04539.11	gi|449067170|ref|YP_007434252.1|	-	0.0041	16.9	0.0	0.0075	16.1	0.0	1.5	1	0	0	1	1	1	1	Sigma-70	region	3
tRNA_SAD	PF07973.9	gi|449067170|ref|YP_007434252.1|	-	0.13	12.1	0.1	0.22	11.4	0.1	1.4	1	0	0	1	1	1	0	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
Pyr_redox_2	PF07992.9	gi|449067171|ref|YP_007434253.1|	-	9.5e-30	103.9	0.7	1.2e-29	103.6	0.5	1.2	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|449067171|ref|YP_007434253.1|	-	4.9e-09	36.5	0.2	1.2e-06	28.7	0.0	2.9	2	1	1	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|449067171|ref|YP_007434253.1|	-	1.2e-08	34.3	0.8	1.4e-05	24.2	0.2	2.7	3	0	0	3	3	3	2	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|449067171|ref|YP_007434253.1|	-	7.5e-08	31.6	2.6	7.1e-06	25.1	0.2	3.0	2	1	0	3	3	3	1	FAD	binding	domain
Pyr_redox	PF00070.22	gi|449067171|ref|YP_007434253.1|	-	4.7e-06	26.9	5.8	0.00011	22.5	0.1	3.1	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.12	gi|449067171|ref|YP_007434253.1|	-	1e-05	24.7	0.3	0.0071	15.4	0.1	2.3	2	0	0	2	2	2	2	Thi4	family
FAD_oxidored	PF12831.2	gi|449067171|ref|YP_007434253.1|	-	2.1e-05	23.8	0.1	0.00032	19.9	0.0	2.1	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|449067171|ref|YP_007434253.1|	-	3.3e-05	23.8	0.1	6.6e-05	22.8	0.1	1.6	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
GIDA	PF01134.17	gi|449067171|ref|YP_007434253.1|	-	5.4e-05	22.2	0.1	5.4e-05	22.2	0.1	3.4	2	2	2	4	4	4	1	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.9	gi|449067171|ref|YP_007434253.1|	-	0.00057	18.4	0.7	0.019	13.4	0.0	2.7	3	0	0	3	3	3	1	HI0933-like	protein
Lycopene_cycl	PF05834.7	gi|449067171|ref|YP_007434253.1|	-	0.0057	15.6	0.2	0.17	10.7	0.1	2.2	2	0	0	2	2	2	1	Lycopene	cyclase	protein
FAD_binding_3	PF01494.14	gi|449067171|ref|YP_007434253.1|	-	0.036	13.1	0.0	0.057	12.4	0.0	1.3	1	0	0	1	1	1	0	FAD	binding	domain
FMO-like	PF00743.14	gi|449067171|ref|YP_007434253.1|	-	0.062	11.4	0.1	0.57	8.3	0.0	2.2	2	1	1	3	3	3	0	Flavin-binding	monooxygenase-like
PMSR	PF01625.16	gi|449067172|ref|YP_007434254.1|	-	1.3e-65	220.0	0.3	1.5e-65	219.8	0.2	1.0	1	0	0	1	1	1	1	Peptide	methionine	sulfoxide	reductase
HTH_45	PF14947.1	gi|449067173|ref|YP_007434255.1|	-	8.8e-10	38.2	7.9	7.7e-07	28.8	0.2	2.5	2	0	0	2	2	2	2	Winged	helix-turn-helix
TrmB	PF01978.14	gi|449067173|ref|YP_007434255.1|	-	5.1e-09	35.7	0.8	1.5e-06	27.7	0.0	2.4	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|449067173|ref|YP_007434255.1|	-	2.5e-08	33.1	7.4	0.00014	21.1	0.3	3.4	3	0	0	3	3	3	2	Winged	helix-turn-helix	DNA-binding
HTH_27	PF13463.1	gi|449067173|ref|YP_007434255.1|	-	1.4e-07	31.6	1.0	3.4e-06	27.2	0.1	2.3	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
MarR	PF01047.17	gi|449067173|ref|YP_007434255.1|	-	8.6e-07	28.5	0.2	3.2e-06	26.7	0.1	1.9	2	0	0	2	2	1	1	MarR	family
MarR_2	PF12802.2	gi|449067173|ref|YP_007434255.1|	-	8.9e-07	28.4	0.0	0.00035	20.1	0.0	2.5	2	0	0	2	2	2	1	MarR	family
HTH_11	PF08279.7	gi|449067173|ref|YP_007434255.1|	-	2.9e-05	23.6	3.5	0.015	14.9	0.2	2.9	3	0	0	3	3	2	2	HTH	domain
HTH_20	PF12840.2	gi|449067173|ref|YP_007434255.1|	-	4.2e-05	23.2	0.0	0.14	11.9	0.0	2.5	2	0	0	2	2	2	2	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|449067173|ref|YP_007434255.1|	-	0.00016	21.7	0.6	0.0068	16.5	0.0	2.5	2	0	0	2	2	2	1	Transcriptional	regulator
HxlR	PF01638.12	gi|449067173|ref|YP_007434255.1|	-	0.00039	19.9	2.4	0.017	14.7	0.1	2.5	2	1	0	2	2	2	1	HxlR-like	helix-turn-helix
HTH_Mga	PF08280.6	gi|449067173|ref|YP_007434255.1|	-	0.0017	18.0	6.4	0.0034	17.0	0.6	2.9	3	0	0	3	3	2	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_10	PF04967.7	gi|449067173|ref|YP_007434255.1|	-	0.0018	17.7	0.9	0.019	14.5	0.0	2.5	2	0	0	2	2	2	1	HTH	DNA	binding	domain
HTH_23	PF13384.1	gi|449067173|ref|YP_007434255.1|	-	0.0025	17.4	0.1	0.25	11.0	0.0	2.4	2	0	0	2	2	2	1	Homeodomain-like	domain
DUF4364	PF14277.1	gi|449067173|ref|YP_007434255.1|	-	0.005	16.4	5.8	0.0081	15.7	0.1	2.4	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4364)
HTH_DeoR	PF08220.7	gi|449067173|ref|YP_007434255.1|	-	0.0056	16.1	0.9	1.4	8.4	0.1	2.7	2	0	0	2	2	2	1	DeoR-like	helix-turn-helix	domain
HTH_29	PF13551.1	gi|449067173|ref|YP_007434255.1|	-	0.011	15.9	0.0	0.14	12.3	0.0	2.1	2	0	0	2	2	2	0	Winged	helix-turn	helix
HTH_28	PF13518.1	gi|449067173|ref|YP_007434255.1|	-	0.011	15.7	0.1	0.14	12.2	0.0	2.3	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_Crp_2	PF13545.1	gi|449067173|ref|YP_007434255.1|	-	0.011	15.4	0.0	0.86	9.4	0.0	2.4	2	0	0	2	2	2	0	Crp-like	helix-turn-helix	domain
PadR	PF03551.9	gi|449067173|ref|YP_007434255.1|	-	0.016	14.9	0.5	0.51	10.1	0.1	2.7	2	1	0	2	2	2	0	Transcriptional	regulator	PadR-like	family
GntR	PF00392.16	gi|449067173|ref|YP_007434255.1|	-	0.018	14.5	0.0	0.12	11.8	0.0	2.2	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
MerR_1	PF13411.1	gi|449067173|ref|YP_007434255.1|	-	0.041	13.6	0.0	0.11	12.3	0.0	1.7	1	0	0	1	1	1	0	MerR	HTH	family	regulatory	protein
Penicillinase_R	PF03965.11	gi|449067173|ref|YP_007434255.1|	-	0.062	13.3	0.7	0.11	12.6	0.1	1.6	2	0	0	2	2	1	0	Penicillinase	repressor
DUF4254	PF14063.1	gi|449067173|ref|YP_007434255.1|	-	0.063	12.8	0.0	0.12	12.0	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4254)
HTH_36	PF13730.1	gi|449067173|ref|YP_007434255.1|	-	0.066	13.3	0.3	1.5	9.0	0.0	2.5	2	0	0	2	2	2	0	Helix-turn-helix	domain
MerR	PF00376.18	gi|449067173|ref|YP_007434255.1|	-	0.076	12.5	0.1	0.18	11.4	0.0	1.7	1	0	0	1	1	1	0	MerR	family	regulatory	protein
HTH_5	PF01022.15	gi|449067173|ref|YP_007434255.1|	-	0.1	12.2	0.1	0.79	9.4	0.0	2.3	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
HTH_30	PF13556.1	gi|449067173|ref|YP_007434255.1|	-	0.11	12.0	0.0	0.22	11.1	0.0	1.5	1	0	0	1	1	1	0	PucR	C-terminal	helix-turn-helix	domain
TFIIE_alpha	PF02002.12	gi|449067173|ref|YP_007434255.1|	-	0.13	11.7	3.3	8.7	5.9	0.6	2.6	2	1	0	2	2	2	0	TFIIE	alpha	subunit
DUF2250	PF10007.4	gi|449067173|ref|YP_007434255.1|	-	0.18	11.7	2.7	0.92	9.4	0.1	2.7	2	1	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
NUMOD1	PF07453.8	gi|449067173|ref|YP_007434255.1|	-	5	7.1	7.5	1.8	8.5	0.1	3.7	4	0	0	4	4	4	0	NUMOD1	domain
T2SF	PF00482.18	gi|449067174|ref|YP_007434256.1|	-	2.1e-10	40.5	13.9	3.8e-10	39.7	0.1	3.5	2	1	1	3	3	3	2	Type	II	secretion	system	(T2SS),	protein	F
DUF912	PF06024.7	gi|449067174|ref|YP_007434256.1|	-	5.6	7.0	7.9	3.1	7.9	0.7	2.7	2	0	0	2	2	2	0	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF912)
T2SE	PF00437.15	gi|449067175|ref|YP_007434257.1|	-	9.7e-48	162.4	0.0	1.4e-47	161.8	0.0	1.2	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_29	PF13555.1	gi|449067175|ref|YP_007434257.1|	-	0.002	17.6	0.0	0.0044	16.5	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|449067175|ref|YP_007434257.1|	-	0.019	14.4	0.0	0.036	13.5	0.0	1.4	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
ABC_tran	PF00005.22	gi|449067175|ref|YP_007434257.1|	-	0.026	14.8	0.0	0.079	13.2	0.0	1.8	2	0	0	2	2	2	0	ABC	transporter
AAA_23	PF13476.1	gi|449067175|ref|YP_007434257.1|	-	0.077	13.3	2.1	0.079	13.2	0.1	1.9	2	0	0	2	2	2	0	AAA	domain
AAA_22	PF13401.1	gi|449067175|ref|YP_007434257.1|	-	0.094	12.8	0.0	0.39	10.8	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
DEAD	PF00270.24	gi|449067175|ref|YP_007434257.1|	-	0.13	11.7	0.0	0.22	11.0	0.0	1.3	1	0	0	1	1	1	0	DEAD/DEAH	box	helicase
AAA_16	PF13191.1	gi|449067175|ref|YP_007434257.1|	-	0.17	11.8	0.0	0.33	10.8	0.0	1.5	1	0	0	1	1	1	0	AAA	ATPase	domain
KaiC	PF06745.8	gi|449067176|ref|YP_007434258.1|	-	2.9e-22	78.9	0.9	3.5e-22	78.6	0.6	1.0	1	0	0	1	1	1	1	KaiC
PAXNEB	PF05625.6	gi|449067176|ref|YP_007434258.1|	-	4.9e-07	28.9	4.0	0.0051	15.6	0.0	2.1	1	1	1	2	2	2	2	PAXNEB	protein
DUF835	PF05763.7	gi|449067176|ref|YP_007434258.1|	-	1.6e-05	24.4	1.8	2.6e-05	23.8	1.2	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF835)
AAA_25	PF13481.1	gi|449067176|ref|YP_007434258.1|	-	3.1e-05	23.4	0.0	6.9e-05	22.3	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
RecA	PF00154.16	gi|449067176|ref|YP_007434258.1|	-	0.0059	15.7	0.2	0.25	10.3	0.0	2.3	2	0	0	2	2	2	1	recA	bacterial	DNA	recombination	protein
AAA_22	PF13401.1	gi|449067176|ref|YP_007434258.1|	-	0.014	15.5	0.2	0.042	13.9	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
NTPase_1	PF03266.10	gi|449067176|ref|YP_007434258.1|	-	0.052	13.2	1.4	0.17	11.5	1.0	1.9	1	1	0	1	1	1	0	NTPase
NACHT	PF05729.7	gi|449067176|ref|YP_007434258.1|	-	0.08	12.5	0.3	0.22	11.1	0.2	1.7	1	1	0	1	1	1	0	NACHT	domain
DUF2075	PF09848.4	gi|449067176|ref|YP_007434258.1|	-	0.088	11.7	0.3	0.18	10.7	0.2	1.6	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_24	PF13479.1	gi|449067176|ref|YP_007434258.1|	-	0.092	12.3	0.1	0.44	10.0	0.0	2.0	1	1	0	2	2	2	0	AAA	domain
AAA_16	PF13191.1	gi|449067176|ref|YP_007434258.1|	-	0.095	12.6	0.0	0.13	12.2	0.0	1.3	1	1	0	1	1	1	0	AAA	ATPase	domain
DUF2151	PF10221.4	gi|449067176|ref|YP_007434258.1|	-	0.099	10.8	0.0	0.14	10.3	0.0	1.1	1	0	0	1	1	1	0	Cell	cycle	and	development	regulator
AAA_10	PF12846.2	gi|449067176|ref|YP_007434258.1|	-	0.11	11.8	0.0	0.13	11.7	0.0	1.2	1	0	0	1	1	1	0	AAA-like	domain
Sigma54_activat	PF00158.21	gi|449067176|ref|YP_007434258.1|	-	0.12	11.8	0.0	0.25	10.7	0.0	1.5	1	0	0	1	1	1	0	Sigma-54	interaction	domain
NOGCT	PF08155.6	gi|449067176|ref|YP_007434258.1|	-	0.13	12.0	0.7	1.2	8.9	0.0	2.2	2	0	0	2	2	2	0	NOGCT	(NUC087)	domain
AAA_5	PF07728.9	gi|449067176|ref|YP_007434258.1|	-	0.13	11.9	0.0	0.23	11.2	0.0	1.4	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
Arch_flagellin	PF01917.11	gi|449067177|ref|YP_007434259.1|	-	0.0083	15.7	2.3	0.028	14.0	1.6	1.7	1	1	0	1	1	1	1	Archaebacterial	flagellin
TadE	PF07811.7	gi|449067177|ref|YP_007434259.1|	-	0.027	14.3	1.1	0.051	13.4	0.8	1.4	1	0	0	1	1	1	0	TadE-like	protein
DUF2304	PF10066.4	gi|449067177|ref|YP_007434259.1|	-	0.041	13.7	0.2	0.074	12.9	0.1	1.4	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2304)
FtsH_ext	PF06480.10	gi|449067177|ref|YP_007434259.1|	-	0.053	13.6	3.2	0.1	12.8	2.2	1.4	1	0	0	1	1	1	0	FtsH	Extracellular
CARDB	PF07705.6	gi|449067177|ref|YP_007434259.1|	-	0.078	13.0	1.3	0.18	11.9	0.9	1.6	1	1	0	1	1	1	0	CARDB
PapD_C	PF02753.12	gi|449067177|ref|YP_007434259.1|	-	2.7	7.8	6.0	0.66	9.8	0.5	2.7	2	1	1	3	3	3	0	Pili	assembly	chaperone	PapD,	C-terminal	domain
Arch_flagellin	PF01917.11	gi|449067178|ref|YP_007434260.1|	-	4.1e-07	29.8	13.0	3.9e-06	26.6	9.0	1.9	1	1	0	1	1	1	1	Archaebacterial	flagellin
DUF1628	PF07790.6	gi|449067178|ref|YP_007434260.1|	-	0.0031	18.2	11.5	0.015	16.0	7.9	2.0	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1628)
DUF1262	PF06880.6	gi|449067178|ref|YP_007434260.1|	-	0.31	11.4	1.4	0.8	10.0	0.2	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1262)
Big_5	PF13205.1	gi|449067178|ref|YP_007434260.1|	-	1.1	9.9	5.0	68	4.1	3.5	2.2	1	1	0	1	1	1	0	Bacterial	Ig-like	domain
UPF0061	PF02696.9	gi|449067179|ref|YP_007434261.1|	-	0.0015	16.9	0.4	0.0019	16.6	0.3	1.1	1	0	0	1	1	1	1	Uncharacterized	ACR,	YdiU/UPF0061	family
APG17	PF04108.7	gi|449067179|ref|YP_007434261.1|	-	0.0035	16.2	2.1	0.0035	16.2	1.4	1.8	2	0	0	2	2	2	1	Autophagy	protein	Apg17
Reo_sigmaC	PF04582.7	gi|449067179|ref|YP_007434261.1|	-	0.012	14.8	1.3	0.016	14.3	0.9	1.2	1	0	0	1	1	1	0	Reovirus	sigma	C	capsid	protein
Baculo_PEP_C	PF04513.7	gi|449067179|ref|YP_007434261.1|	-	0.017	14.9	5.0	0.11	12.2	1.2	2.5	2	1	0	3	3	3	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Not3	PF04065.10	gi|449067179|ref|YP_007434261.1|	-	0.018	14.3	3.3	0.034	13.4	2.3	1.5	1	0	0	1	1	1	0	Not1	N-terminal	domain,	CCR4-Not	complex	component
V-SNARE	PF05008.10	gi|449067179|ref|YP_007434261.1|	-	0.041	14.0	1.4	0.12	12.5	1.0	1.7	1	0	0	1	1	1	0	Vesicle	transport	v-SNARE	protein	N-terminus
Hemagglutinin	PF00509.13	gi|449067179|ref|YP_007434261.1|	-	0.1	10.7	1.9	0.15	10.1	1.3	1.3	1	0	0	1	1	1	0	Haemagglutinin
Glutaredoxin2_C	PF04399.8	gi|449067179|ref|YP_007434261.1|	-	0.19	11.3	2.4	0.91	9.1	0.8	2.4	2	1	0	2	2	2	0	Glutaredoxin	2,	C	terminal	domain
Fib_alpha	PF08702.5	gi|449067179|ref|YP_007434261.1|	-	0.57	10.3	5.8	0.27	11.3	2.2	1.9	1	1	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
DASH_Dad1	PF08649.5	gi|449067179|ref|YP_007434261.1|	-	0.7	9.6	6.5	0.49	10.1	2.5	2.3	2	1	1	3	3	3	0	DASH	complex	subunit	Dad1
MCPsignal	PF00015.16	gi|449067179|ref|YP_007434261.1|	-	1.5	8.3	6.1	0.61	9.5	2.5	1.6	2	0	0	2	2	2	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
ALMT	PF11744.3	gi|449067179|ref|YP_007434261.1|	-	1.6	7.2	8.3	1.4	7.5	4.3	1.7	1	1	0	1	1	1	0	Aluminium	activated	malate	transporter
IncA	PF04156.9	gi|449067179|ref|YP_007434261.1|	-	2.3	7.7	9.2	5.9	6.4	6.4	1.7	1	1	0	1	1	1	0	IncA	protein
Arch_flagellin	PF01917.11	gi|449067180|ref|YP_007434262.1|	-	1.8e-17	63.6	12.5	2e-16	60.1	8.2	2.3	1	1	1	2	2	2	2	Archaebacterial	flagellin
Adeno_shaft	PF00608.12	gi|449067180|ref|YP_007434262.1|	-	0.43	10.2	3.3	12	5.7	0.1	3.4	3	0	0	3	3	3	0	Adenoviral	fibre	protein	(repeat/shaft	region)
DUF4190	PF13828.1	gi|449067180|ref|YP_007434262.1|	-	0.76	9.3	5.6	1.6	8.3	1.2	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4190)
TrmB	PF01978.14	gi|449067182|ref|YP_007434264.1|	-	1.6e-09	37.2	0.1	3.7e-06	26.5	0.0	2.4	2	0	0	2	2	2	2	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|449067182|ref|YP_007434264.1|	-	1.5e-08	33.8	0.8	0.00014	21.1	0.3	2.5	2	0	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
HTH_45	PF14947.1	gi|449067182|ref|YP_007434264.1|	-	2.2e-08	33.7	3.6	2.3e-06	27.3	0.1	2.4	2	0	0	2	2	2	1	Winged	helix-turn-helix
MarR_2	PF12802.2	gi|449067182|ref|YP_007434264.1|	-	4.7e-08	32.5	0.0	0.00081	19.0	0.0	2.4	2	0	0	2	2	2	2	MarR	family
MarR	PF01047.17	gi|449067182|ref|YP_007434264.1|	-	1e-07	31.5	0.9	1.4e-06	27.8	0.1	2.4	2	1	0	2	2	2	1	MarR	family
HTH_11	PF08279.7	gi|449067182|ref|YP_007434264.1|	-	7.7e-07	28.6	1.6	0.013	15.1	0.2	2.5	2	0	0	2	2	2	2	HTH	domain
HTH_27	PF13463.1	gi|449067182|ref|YP_007434264.1|	-	2.9e-06	27.4	0.1	6.1e-06	26.4	0.1	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_20	PF12840.2	gi|449067182|ref|YP_007434264.1|	-	5.4e-06	26.1	0.0	0.11	12.3	0.0	2.4	2	0	0	2	2	2	2	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|449067182|ref|YP_007434264.1|	-	3.3e-05	23.3	0.0	0.0028	17.2	0.0	2.3	2	0	0	2	2	2	1	Homeodomain-like	domain
HTH_28	PF13518.1	gi|449067182|ref|YP_007434264.1|	-	0.00013	21.8	0.0	0.0019	18.1	0.0	2.3	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_30	PF13556.1	gi|449067182|ref|YP_007434264.1|	-	0.00016	21.2	0.0	0.00032	20.2	0.0	1.4	1	0	0	1	1	1	1	PucR	C-terminal	helix-turn-helix	domain
HTH_29	PF13551.1	gi|449067182|ref|YP_007434264.1|	-	0.00085	19.4	0.0	0.012	15.6	0.0	2.1	2	0	0	2	2	2	1	Winged	helix-turn	helix
HTH_8	PF02954.14	gi|449067182|ref|YP_007434264.1|	-	0.0016	17.9	0.0	0.0035	16.8	0.0	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	Fis	family
GntR	PF00392.16	gi|449067182|ref|YP_007434264.1|	-	0.0017	17.7	0.0	0.27	10.6	0.0	2.4	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	gntR	family
HTH_Crp_2	PF13545.1	gi|449067182|ref|YP_007434264.1|	-	0.0037	17.0	0.0	1.6	8.5	0.0	2.4	2	0	0	2	2	2	1	Crp-like	helix-turn-helix	domain
HTH_Mga	PF08280.6	gi|449067182|ref|YP_007434264.1|	-	0.0041	16.8	0.7	0.15	11.8	0.0	2.6	2	0	0	2	2	2	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_7	PF02796.10	gi|449067182|ref|YP_007434264.1|	-	0.0049	16.7	0.1	0.15	11.9	0.0	2.3	2	0	0	2	2	2	1	Helix-turn-helix	domain	of	resolvase
NUMOD1	PF07453.8	gi|449067182|ref|YP_007434264.1|	-	0.01	15.6	1.5	0.034	14.0	0.0	2.5	2	0	0	2	2	2	0	NUMOD1	domain
HTH_psq	PF05225.11	gi|449067182|ref|YP_007434264.1|	-	0.012	15.1	0.0	0.025	14.1	0.0	1.5	1	0	0	1	1	1	0	helix-turn-helix,	Psq	domain
HTH_10	PF04967.7	gi|449067182|ref|YP_007434264.1|	-	0.016	14.7	0.3	0.19	11.3	0.0	2.3	2	0	0	2	2	2	0	HTH	DNA	binding	domain
MerR_1	PF13411.1	gi|449067182|ref|YP_007434264.1|	-	0.017	14.8	0.0	0.052	13.3	0.0	1.8	1	0	0	1	1	1	0	MerR	HTH	family	regulatory	protein
Sigma70_r4_2	PF08281.7	gi|449067182|ref|YP_007434264.1|	-	0.019	14.4	0.3	0.15	11.5	0.0	2.4	2	0	0	2	2	2	0	Sigma-70,	region	4
HTH_36	PF13730.1	gi|449067182|ref|YP_007434264.1|	-	0.02	14.9	0.5	1.5	9.0	0.0	2.6	2	0	0	2	2	2	0	Helix-turn-helix	domain
RWP-RK	PF02042.10	gi|449067182|ref|YP_007434264.1|	-	0.022	14.5	0.1	0.47	10.3	0.0	2.4	1	1	0	1	1	1	0	RWP-RK	domain
UPF0122	PF04297.9	gi|449067182|ref|YP_007434264.1|	-	0.026	14.5	0.2	0.55	10.2	0.0	2.4	2	0	0	2	2	2	0	Putative	helix-turn-helix	protein,	YlxM	/	p13	like
HTH_AsnC-type	PF13404.1	gi|449067182|ref|YP_007434264.1|	-	0.029	13.9	0.0	1.4	8.5	0.0	2.3	2	0	0	2	2	2	0	AsnC-type	helix-turn-helix	domain
Penicillinase_R	PF03965.11	gi|449067182|ref|YP_007434264.1|	-	0.037	14.1	0.9	0.084	12.9	0.1	1.8	2	0	0	2	2	2	0	Penicillinase	repressor
Rrf2	PF02082.15	gi|449067182|ref|YP_007434264.1|	-	0.037	14.1	0.3	0.13	12.3	0.1	1.9	2	0	0	2	2	2	0	Transcriptional	regulator
HTH_17	PF12728.2	gi|449067182|ref|YP_007434264.1|	-	0.044	14.0	0.4	0.2	11.9	0.1	2.1	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_3	PF01381.17	gi|449067182|ref|YP_007434264.1|	-	0.046	13.5	0.0	0.13	12.1	0.0	1.8	1	0	0	1	1	1	0	Helix-turn-helix
DUF387	PF04079.11	gi|449067182|ref|YP_007434264.1|	-	0.056	12.8	0.0	0.12	11.7	0.0	1.5	1	0	0	1	1	1	0	Putative	transcriptional	regulators	(Ypuh-like)
DUF4254	PF14063.1	gi|449067182|ref|YP_007434264.1|	-	0.069	12.7	0.2	0.11	12.1	0.2	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4254)
HTH_DeoR	PF08220.7	gi|449067182|ref|YP_007434264.1|	-	0.071	12.6	0.2	6	6.4	0.0	2.5	2	0	0	2	2	2	0	DeoR-like	helix-turn-helix	domain
FeoC	PF09012.5	gi|449067182|ref|YP_007434264.1|	-	0.073	12.7	0.0	8.8	6.1	0.0	2.3	2	0	0	2	2	2	0	FeoC	like	transcriptional	regulator
MerR	PF00376.18	gi|449067182|ref|YP_007434264.1|	-	0.09	12.3	0.0	0.25	10.9	0.0	1.7	1	0	0	1	1	1	0	MerR	family	regulatory	protein
HTH_5	PF01022.15	gi|449067182|ref|YP_007434264.1|	-	0.11	12.1	0.0	0.8	9.4	0.0	2.1	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
B-block_TFIIIC	PF04182.7	gi|449067182|ref|YP_007434264.1|	-	0.13	12.1	0.6	0.3	10.9	0.1	1.9	2	0	0	2	2	1	0	B-block	binding	subunit	of	TFIIIC
DUF2968	PF11180.3	gi|449067182|ref|YP_007434264.1|	-	0.14	11.5	0.0	0.24	10.7	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2968)
Pkinase	PF00069.20	gi|449067183|ref|YP_007434265.1|	-	2.9e-32	111.8	0.0	3.9e-32	111.4	0.0	1.1	1	0	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|449067183|ref|YP_007434265.1|	-	3.3e-15	55.8	0.0	8.6e-15	54.5	0.0	1.7	1	1	0	1	1	1	1	Protein	tyrosine	kinase
Kinase-like	PF14531.1	gi|449067183|ref|YP_007434265.1|	-	0.0016	17.4	0.0	0.03	13.2	0.0	2.1	1	1	0	1	1	1	1	Kinase-like
GTF2I	PF02946.9	gi|449067183|ref|YP_007434265.1|	-	0.026	14.3	0.0	0.066	13.0	0.0	1.6	1	0	0	1	1	1	0	GTF2I-like	repeat
Kdo	PF06293.9	gi|449067183|ref|YP_007434265.1|	-	0.11	11.5	0.0	0.19	10.7	0.0	1.3	1	0	0	1	1	1	0	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
MFS_1	PF07690.11	gi|449067184|ref|YP_007434266.1|	-	4.1e-52	177.0	68.1	4.1e-41	140.8	30.4	2.7	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|449067184|ref|YP_007434266.1|	-	1.9e-12	46.5	34.5	1.9e-12	46.5	9.0	2.7	2	1	0	2	2	2	2	Sugar	(and	other)	transporter
MFS_2	PF13347.1	gi|449067184|ref|YP_007434266.1|	-	6.1e-08	31.4	42.5	3.8e-05	22.2	6.1	3.3	1	1	2	3	3	3	3	MFS/sugar	transport	protein
OATP	PF03137.15	gi|449067184|ref|YP_007434266.1|	-	0.0023	16.0	0.7	0.0023	16.0	0.5	3.7	3	1	1	4	4	4	2	Organic	Anion	Transporter	Polypeptide	(OATP)	family
Peptidase_M50	PF02163.17	gi|449067184|ref|YP_007434266.1|	-	6.5	5.6	12.2	1.3e+03	-1.9	8.4	3.9	1	1	0	1	1	1	0	Peptidase	family	M50
NPCBM_assoc	PF10633.4	gi|449067185|ref|YP_007434267.1|	-	1.8e-15	56.6	24.4	0.0068	16.4	0.0	10.0	9	1	1	10	10	10	6	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
CARDB	PF07705.6	gi|449067185|ref|YP_007434267.1|	-	1.9e-08	34.2	44.2	0.0091	16.0	1.7	8.0	6	2	2	9	9	9	5	CARDB
DUF11	PF01345.13	gi|449067185|ref|YP_007434267.1|	-	0.013	15.4	4.3	0.013	15.4	3.0	8.2	8	1	0	8	8	8	0	Domain	of	unknown	function	DUF11
DUF824	PF05688.6	gi|449067185|ref|YP_007434267.1|	-	1.2	8.8	7.9	6.3	6.5	0.1	4.2	4	0	0	4	4	4	0	Salmonella	repeat	of	unknown	function	(DUF824)
Rifin_STEVOR	PF02009.11	gi|449067185|ref|YP_007434267.1|	-	7.1	6.1	8.6	12	5.4	6.0	1.3	1	0	0	1	1	1	0	Rifin/stevor	family
AMP-binding	PF00501.23	gi|449067186|ref|YP_007434268.1|	-	6.8e-85	284.9	0.0	8.2e-85	284.6	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|449067186|ref|YP_007434268.1|	-	2.5e-19	69.9	0.3	5e-19	69.0	0.2	1.6	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
MFS_1	PF07690.11	gi|449067187|ref|YP_007434269.1|	-	0.014	14.1	55.6	0.0078	14.9	12.0	3.5	1	1	1	2	2	2	0	Major	Facilitator	Superfamily
HTH_24	PF13412.1	gi|449067188|ref|YP_007434270.1|	-	1e-07	31.2	3.1	1.8e-07	30.4	2.2	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.17	gi|449067188|ref|YP_007434270.1|	-	1.9e-07	30.6	0.3	3.3e-07	29.9	0.2	1.3	1	0	0	1	1	1	1	MarR	family
HTH_34	PF13601.1	gi|449067188|ref|YP_007434270.1|	-	1e-06	28.6	0.1	1.2e-06	28.4	0.1	1.1	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_Crp_2	PF13545.1	gi|449067188|ref|YP_007434270.1|	-	2.3e-05	24.0	0.1	3.6e-05	23.4	0.0	1.5	1	1	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_27	PF13463.1	gi|449067188|ref|YP_007434270.1|	-	2.6e-05	24.4	0.1	3.9e-05	23.8	0.1	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_5	PF01022.15	gi|449067188|ref|YP_007434270.1|	-	2.8e-05	23.6	0.2	5.4e-05	22.7	0.1	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
MarR_2	PF12802.2	gi|449067188|ref|YP_007434270.1|	-	3.2e-05	23.5	0.0	4.5e-05	23.0	0.0	1.3	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|449067188|ref|YP_007434270.1|	-	0.00018	21.1	0.5	0.0003	20.4	0.1	1.5	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_20	PF12840.2	gi|449067188|ref|YP_007434270.1|	-	0.0042	16.8	0.1	0.0066	16.2	0.1	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
Crp	PF00325.15	gi|449067188|ref|YP_007434270.1|	-	0.0049	16.3	0.9	0.037	13.4	0.6	2.2	1	1	0	1	1	1	1	Bacterial	regulatory	proteins,	crp	family
Rrf2	PF02082.15	gi|449067188|ref|YP_007434270.1|	-	0.009	16.1	0.1	0.014	15.4	0.1	1.3	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_12	PF08461.5	gi|449067188|ref|YP_007434270.1|	-	0.012	15.3	0.4	0.022	14.4	0.3	1.5	1	0	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
HTH_11	PF08279.7	gi|449067188|ref|YP_007434270.1|	-	0.018	14.6	0.6	0.027	14.1	0.4	1.4	1	0	0	1	1	1	0	HTH	domain
LexA_DNA_bind	PF01726.11	gi|449067188|ref|YP_007434270.1|	-	0.019	14.5	0.1	0.027	14.0	0.0	1.3	1	0	0	1	1	1	0	LexA	DNA	binding	domain
GntR	PF00392.16	gi|449067188|ref|YP_007434270.1|	-	0.021	14.2	0.3	0.037	13.4	0.1	1.5	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
HTH_DeoR	PF08220.7	gi|449067188|ref|YP_007434270.1|	-	0.032	13.7	0.3	0.081	12.4	0.1	1.7	2	0	0	2	2	2	0	DeoR-like	helix-turn-helix	domain
Sigma70_r4	PF04545.11	gi|449067188|ref|YP_007434270.1|	-	0.084	12.1	0.1	0.58	9.5	0.1	2.2	2	1	0	2	2	2	0	Sigma-70,	region	4
RNA_pol_Rpb2_6	PF00562.23	gi|449067188|ref|YP_007434270.1|	-	0.11	11.1	0.0	0.11	11.1	0.0	1.0	1	0	0	1	1	1	0	RNA	polymerase	Rpb2,	domain	6
IU_nuc_hydro	PF01156.14	gi|449067189|ref|YP_007434271.1|	-	3.1e-79	266.4	0.0	3.7e-79	266.1	0.0	1.0	1	0	0	1	1	1	1	Inosine-uridine	preferring	nucleoside	hydrolase
FAD_binding_4	PF01565.18	gi|449067190|ref|YP_007434272.1|	-	7e-38	129.2	0.0	1.1e-37	128.6	0.0	1.3	1	0	0	1	1	1	1	FAD	binding	domain
FAD-oxidase_C	PF02913.14	gi|449067190|ref|YP_007434272.1|	-	5.2e-34	117.6	0.0	6.8e-34	117.2	0.0	1.1	1	0	0	1	1	1	1	FAD	linked	oxidases,	C-terminal	domain
FAD_binding_5	PF00941.16	gi|449067190|ref|YP_007434272.1|	-	0.13	11.6	0.3	0.48	9.8	0.2	1.8	1	1	0	1	1	1	0	FAD	binding	domain	in	molybdopterin	dehydrogenase
FAD_binding_4	PF01565.18	gi|449067191|ref|YP_007434273.1|	-	2.7e-07	30.1	0.0	4.6e-07	29.3	0.0	1.3	1	0	0	1	1	1	1	FAD	binding	domain
AIRC	PF00731.15	gi|449067192|ref|YP_007434274.1|	-	2.3e-68	228.1	0.6	2.6e-68	228.0	0.4	1.0	1	0	0	1	1	1	1	AIR	carboxylase
Fe-ADH	PF00465.14	gi|449067192|ref|YP_007434274.1|	-	0.0047	15.6	0.1	0.0083	14.8	0.1	1.3	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Glutaredoxin	PF00462.19	gi|449067192|ref|YP_007434274.1|	-	0.013	15.4	0.1	0.041	13.8	0.0	1.8	2	0	0	2	2	2	0	Glutaredoxin
DUF4419	PF14388.1	gi|449067192|ref|YP_007434274.1|	-	0.015	14.5	0.0	0.022	13.9	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4419)
Fe-ADH_2	PF13685.1	gi|449067192|ref|YP_007434274.1|	-	0.019	14.3	0.0	0.024	13.9	0.0	1.2	1	0	0	1	1	1	0	Iron-containing	alcohol	dehydrogenase
VirE	PF05272.6	gi|449067192|ref|YP_007434274.1|	-	0.13	11.7	0.1	0.64	9.4	0.0	1.9	2	0	0	2	2	2	0	Virulence-associated	protein	E
ATP-grasp	PF02222.17	gi|449067193|ref|YP_007434275.1|	-	1.3e-47	161.3	0.0	1.9e-47	160.7	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|449067193|ref|YP_007434275.1|	-	0.00023	20.9	0.0	0.00064	19.4	0.0	1.7	1	1	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_3	PF02655.9	gi|449067193|ref|YP_007434275.1|	-	0.00057	19.7	0.0	0.0011	18.8	0.0	1.5	1	1	0	1	1	1	1	ATP-grasp	domain
DUF1474	PF07342.6	gi|449067193|ref|YP_007434275.1|	-	0.027	14.6	8.1	0.47	10.6	0.4	3.6	4	1	1	5	5	5	0	Protein	of	unknown	function	(DUF1474)
HTH_1	PF00126.22	gi|449067194|ref|YP_007434276.1|	-	0.0067	16.1	0.0	0.012	15.2	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
Pkinase	PF00069.20	gi|449067195|ref|YP_007434277.1|	-	2.2e-27	95.8	0.1	7e-27	94.2	0.0	1.9	2	0	0	2	2	2	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|449067195|ref|YP_007434277.1|	-	7.3e-11	41.6	0.0	1.8e-10	40.3	0.0	1.7	1	1	0	1	1	1	1	Protein	tyrosine	kinase
Apc3	PF12895.2	gi|449067195|ref|YP_007434277.1|	-	2.7e-09	37.0	7.9	9.8e-07	28.8	0.9	2.6	2	0	0	2	2	2	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_19	PF14559.1	gi|449067195|ref|YP_007434277.1|	-	2.4e-08	34.1	0.3	0.00031	21.0	0.1	2.7	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|449067195|ref|YP_007434277.1|	-	1.2e-07	31.2	4.9	4.8e-06	26.1	0.2	3.5	2	2	1	3	3	3	2	TPR	repeat
TPR_16	PF13432.1	gi|449067195|ref|YP_007434277.1|	-	1.8e-07	31.6	0.0	0.0017	18.9	0.1	3.2	2	1	0	2	2	2	2	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|449067195|ref|YP_007434277.1|	-	2.3e-07	30.8	0.1	0.13	13.0	0.0	3.6	2	1	1	3	3	3	2	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|449067195|ref|YP_007434277.1|	-	6.6e-07	28.7	7.9	0.015	15.1	0.0	4.2	3	1	1	4	4	4	2	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|449067195|ref|YP_007434277.1|	-	1.8e-06	27.2	7.8	0.044	13.4	0.1	4.3	4	0	0	4	4	4	2	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|449067195|ref|YP_007434277.1|	-	0.0001	22.1	6.4	0.2	11.6	0.2	3.7	2	2	2	4	4	3	2	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|449067195|ref|YP_007434277.1|	-	0.00016	21.9	1.4	15	6.3	0.0	5.0	4	0	0	4	4	4	0	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|449067195|ref|YP_007434277.1|	-	0.0024	17.5	3.4	0.72	9.7	0.0	3.4	3	0	0	3	3	3	2	Tetratricopeptide	repeat
PPR	PF01535.15	gi|449067195|ref|YP_007434277.1|	-	0.034	14.1	3.2	34	4.7	0.0	4.8	5	0	0	5	5	5	0	PPR	repeat
DUF1955	PF09205.5	gi|449067195|ref|YP_007434277.1|	-	0.035	13.6	0.3	0.13	11.8	0.2	2.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1955)
TPR_7	PF13176.1	gi|449067195|ref|YP_007434277.1|	-	0.095	12.5	5.0	8.9	6.3	0.0	4.0	2	2	2	4	4	4	0	Tetratricopeptide	repeat
APH	PF01636.18	gi|449067195|ref|YP_007434277.1|	-	0.14	11.9	0.0	10	5.7	0.0	2.3	1	1	0	2	2	2	0	Phosphotransferase	enzyme	family
Ribonuc_L-PSP	PF01042.16	gi|449067197|ref|YP_007434279.1|	-	2.3e-42	143.5	0.0	2.5e-42	143.4	0.0	1.0	1	0	0	1	1	1	1	Endoribonuclease	L-PSP
CBS	PF00571.23	gi|449067198|ref|YP_007434280.1|	-	1.2e-49	165.7	13.7	2.1e-15	56.1	0.1	4.1	4	0	0	4	4	4	4	CBS	domain
DisA_N	PF02457.11	gi|449067198|ref|YP_007434280.1|	-	0.031	13.4	0.3	8	5.6	0.0	3.1	3	0	0	3	3	3	0	DisA	bacterial	checkpoint	controller	nucleotide-binding
UPF0262	PF06793.7	gi|449067198|ref|YP_007434280.1|	-	0.068	12.8	0.0	0.11	12.2	0.0	1.3	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0262)
GDE_C	PF06202.9	gi|449067199|ref|YP_007434281.1|	-	2e-114	382.1	0.0	2.9e-114	381.6	0.0	1.2	1	0	0	1	1	1	1	Amylo-alpha-1,6-glucosidase
GDE_N	PF12439.3	gi|449067199|ref|YP_007434281.1|	-	1.2e-46	158.7	1.0	1.7e-46	158.2	0.4	1.4	2	0	0	2	2	2	1	Glycogen	debranching	enzyme	N	terminal
DUF608	PF04685.8	gi|449067199|ref|YP_007434281.1|	-	0.00013	20.7	0.0	0.00036	19.3	0.0	1.6	1	1	0	1	1	1	1	Protein	of	unknown	function,	DUF608
Pox_H7	PF04787.7	gi|449067199|ref|YP_007434281.1|	-	0.06	13.1	1.2	0.11	12.3	0.9	1.3	1	0	0	1	1	1	0	Late	protein	H7
Glyco_hydro_15	PF00723.16	gi|449067200|ref|YP_007434282.1|	-	4.7e-18	64.9	0.6	4e-14	52.0	0.8	3.1	1	1	1	2	2	2	2	Glycosyl	hydrolases	family	15
NTP_transferase	PF00483.18	gi|449067201|ref|YP_007434283.1|	-	7.3e-40	136.8	0.0	9.3e-40	136.4	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|449067201|ref|YP_007434283.1|	-	8.5e-06	25.9	0.0	1.9e-05	24.8	0.0	1.6	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep	PF00132.19	gi|449067201|ref|YP_007434283.1|	-	1.4e-05	24.4	9.6	0.016	14.6	0.2	4.6	2	2	3	5	5	5	3	Bacterial	transferase	hexapeptide	(six	repeats)
Hexapep_2	PF14602.1	gi|449067201|ref|YP_007434283.1|	-	0.41	10.2	4.9	5.3	6.7	0.2	3.1	2	1	1	3	3	3	0	Hexapeptide	repeat	of	succinyl-transferase
Glyco_hydro_57	PF03065.10	gi|449067202|ref|YP_007434284.1|	-	9.5e-72	241.8	6.1	6.4e-71	239.1	4.2	2.1	1	1	0	1	1	1	1	Glycosyl	hydrolase	family	57
Erp_C	PF06780.6	gi|449067202|ref|YP_007434284.1|	-	0.098	12.4	7.7	3	7.6	0.1	3.3	3	0	0	3	3	3	0	Erp	protein	C-terminus
Glyco_transf_5	PF08323.6	gi|449067203|ref|YP_007434285.1|	-	6.8e-32	110.8	0.1	1.2e-31	110.1	0.1	1.3	1	0	0	1	1	1	1	Starch	synthase	catalytic	domain
Glycos_transf_1	PF00534.15	gi|449067203|ref|YP_007434285.1|	-	1.5e-31	109.0	0.0	2.9e-31	108.2	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|449067203|ref|YP_007434285.1|	-	1.7e-12	47.6	0.0	3.1e-12	46.7	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.1	gi|449067203|ref|YP_007434285.1|	-	3e-06	27.4	0.4	5.3e-05	23.4	0.3	2.3	1	1	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_1_2	PF13524.1	gi|449067203|ref|YP_007434285.1|	-	0.00017	21.7	0.0	0.0013	19.0	0.0	2.2	1	1	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|449067203|ref|YP_007434285.1|	-	0.0033	17.1	0.8	0.012	15.2	0.0	2.1	2	0	0	2	2	2	1	Glycosyltransferase	Family	4
Oxidored_molyb	PF00174.14	gi|449067204|ref|YP_007434286.1|	-	1.7e-44	151.2	0.0	2e-44	150.9	0.0	1.0	1	0	0	1	1	1	1	Oxidoreductase	molybdopterin	binding	domain
Cpn60_TCP1	PF00118.19	gi|449067205|ref|YP_007434287.1|	-	1.4e-151	505.4	21.8	1.6e-151	505.2	15.1	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
DUF650	PF04894.7	gi|449067206|ref|YP_007434288.1|	-	0.047	13.1	0.0	0.048	13.1	0.0	1.0	1	0	0	1	1	1	0	Archaeal	protein	of	unknown	function	(DUF650)
CAMP_factor	PF07373.6	gi|449067206|ref|YP_007434288.1|	-	0.11	11.9	0.0	0.14	11.6	0.0	1.1	1	0	0	1	1	1	0	CAMP	factor	(Cfa)
Methyltransf_11	PF08241.7	gi|449067207|ref|YP_007434289.1|	-	3.4e-05	24.2	0.0	0.0012	19.3	0.0	2.3	2	0	0	2	2	2	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|449067207|ref|YP_007434289.1|	-	0.036	13.1	0.0	0.057	12.5	0.0	1.3	1	0	0	1	1	1	0	ubiE/COQ5	methyltransferase	family
CBS	PF00571.23	gi|449067208|ref|YP_007434290.1|	-	1.8e-23	82.0	0.1	9.2e-11	41.3	0.0	2.0	2	0	0	2	2	2	2	CBS	domain
Amidohydro_1	PF01979.15	gi|449067208|ref|YP_007434290.1|	-	0.089	12.4	0.1	0.26	10.8	0.0	1.6	1	1	0	1	1	1	0	Amidohydrolase	family
DSBA	PF01323.15	gi|449067209|ref|YP_007434291.1|	-	5e-22	78.4	1.0	2.8e-21	75.9	0.7	1.9	1	1	0	1	1	1	1	DSBA-like	thioredoxin	domain
Thioredoxin_5	PF13743.1	gi|449067209|ref|YP_007434291.1|	-	6e-20	71.5	0.3	9.6e-20	70.8	0.2	1.2	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_4	PF13462.1	gi|449067209|ref|YP_007434291.1|	-	8.1e-09	35.6	2.7	5e-06	26.6	0.0	2.2	1	1	1	2	2	2	2	Thioredoxin
Thioredoxin_3	PF13192.1	gi|449067209|ref|YP_007434291.1|	-	3.9e-06	26.5	0.2	0.0007	19.3	0.0	2.4	2	0	0	2	2	2	2	Thioredoxin	domain
Thioredoxin_2	PF13098.1	gi|449067209|ref|YP_007434291.1|	-	0.00021	21.4	2.2	0.0069	16.5	1.5	2.3	1	1	0	1	1	1	1	Thioredoxin-like	domain
DUF1525	PF07511.6	gi|449067209|ref|YP_007434291.1|	-	0.02	14.9	0.0	0.033	14.1	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1525)
VWA_2	PF13519.1	gi|449067210|ref|YP_007434292.1|	-	4.1e-16	59.5	0.0	8.2e-16	58.5	0.0	1.4	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.23	gi|449067210|ref|YP_007434292.1|	-	1.5e-12	47.5	1.1	2.5e-12	46.8	0.2	1.7	2	0	0	2	2	2	1	von	Willebrand	factor	type	A	domain
VWA_3	PF13768.1	gi|449067210|ref|YP_007434292.1|	-	7.5e-11	41.9	0.0	1.8e-10	40.7	0.0	1.6	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
vWA-TerF-like	PF10138.4	gi|449067210|ref|YP_007434292.1|	-	6.9e-05	22.7	0.0	0.00025	20.9	0.0	2.0	1	1	0	1	1	1	1	vWA	found	in	TerF	C	terminus
FHA	PF00498.21	gi|449067211|ref|YP_007434293.1|	-	1.4e-16	60.3	0.3	3.6e-16	59.0	0.0	1.8	2	0	0	2	2	2	1	FHA	domain
zinc_ribbon_2	PF13240.1	gi|449067211|ref|YP_007434293.1|	-	1.5e-05	24.3	2.4	3.3e-05	23.2	1.7	1.5	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|449067211|ref|YP_007434293.1|	-	0.00016	20.7	0.5	0.00027	20.0	0.4	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|449067211|ref|YP_007434293.1|	-	0.00069	19.3	1.9	0.0011	18.6	1.3	1.4	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-RanBP	PF00641.13	gi|449067211|ref|YP_007434293.1|	-	0.0012	17.9	1.6	0.0018	17.3	1.1	1.3	1	0	0	1	1	1	1	Zn-finger	in	Ran	binding	protein	and	others
Prok-RING_1	PF14446.1	gi|449067211|ref|YP_007434293.1|	-	0.035	13.8	1.1	0.05	13.3	0.8	1.2	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
zf-Sec23_Sec24	PF04810.10	gi|449067211|ref|YP_007434293.1|	-	0.057	12.9	1.8	0.075	12.6	0.2	1.9	2	0	0	2	2	2	0	Sec23/Sec24	zinc	finger
DUF2318	PF10080.4	gi|449067211|ref|YP_007434293.1|	-	0.1	12.4	0.6	0.19	11.4	0.4	1.5	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2318)
DUF2387	PF09526.5	gi|449067211|ref|YP_007434293.1|	-	0.18	11.7	0.9	0.38	10.6	0.6	1.7	1	0	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
A2L_zn_ribbon	PF08792.5	gi|449067211|ref|YP_007434293.1|	-	0.38	10.2	3.9	3.3	7.2	2.7	2.3	1	1	0	1	1	1	0	A2L	zinc	ribbon	domain
DUF2360	PF10152.4	gi|449067211|ref|YP_007434293.1|	-	2	8.7	9.4	2.9	8.1	6.5	1.2	1	0	0	1	1	1	0	Predicted	coiled-coil	domain-containing	protein	(DUF2360)
DUF605	PF04652.11	gi|449067211|ref|YP_007434293.1|	-	2	7.6	15.2	2.5	7.4	10.5	1.1	1	0	0	1	1	1	0	Vta1	like
Rubredoxin	PF00301.15	gi|449067211|ref|YP_007434293.1|	-	2.5	8.0	5.6	11	5.9	2.3	2.9	2	1	0	2	2	2	0	Rubredoxin
PAT1	PF09770.4	gi|449067211|ref|YP_007434293.1|	-	4.1	5.5	22.1	5.1	5.2	15.3	1.0	1	0	0	1	1	1	0	Topoisomerase	II-associated	protein	PAT1
VWA_2	PF13519.1	gi|449067212|ref|YP_007434294.1|	-	7.6e-23	81.4	0.0	2.6e-22	79.7	0.0	1.7	2	0	0	2	2	2	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.23	gi|449067212|ref|YP_007434294.1|	-	1.1e-18	67.5	0.2	4.1e-18	65.7	0.0	1.8	2	0	0	2	2	2	1	von	Willebrand	factor	type	A	domain
VWA_3	PF13768.1	gi|449067212|ref|YP_007434294.1|	-	4.9e-10	39.2	0.0	1.1e-09	38.1	0.0	1.5	2	0	0	2	2	2	1	von	Willebrand	factor	type	A	domain
VWA_CoxE	PF05762.9	gi|449067212|ref|YP_007434294.1|	-	1.2e-06	27.8	0.1	3e-06	26.5	0.0	1.6	2	0	0	2	2	2	1	VWA	domain	containing	CoxE-like	protein
vWA-TerF-like	PF10138.4	gi|449067212|ref|YP_007434294.1|	-	0.00015	21.6	0.3	0.00095	19.0	0.0	2.2	2	0	0	2	2	2	1	vWA	found	in	TerF	C	terminus
DUF2201	PF09967.4	gi|449067212|ref|YP_007434294.1|	-	0.00023	21.1	0.3	0.00076	19.5	0.0	1.9	2	0	0	2	2	2	1	VWA-like	domain	(DUF2201)
3H	PF02829.9	gi|449067212|ref|YP_007434294.1|	-	0.11	12.5	0.9	3.5	7.7	0.2	3.1	2	1	1	3	3	3	0	3H	domain
Antitoxin-MazE	PF04014.13	gi|449067213|ref|YP_007434295.1|	-	5.1e-08	32.4	1.0	5.7e-08	32.3	0.7	1.1	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
eIF-1a	PF01176.14	gi|449067213|ref|YP_007434295.1|	-	0.0034	16.7	2.4	0.0051	16.2	1.4	1.6	1	1	1	2	2	2	1	Translation	initiation	factor	1A	/	IF-1
DUF402	PF04167.8	gi|449067214|ref|YP_007434296.1|	-	8.1e-19	67.2	2.8	1.8e-18	66.1	2.0	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF402)
KaiC	PF06745.8	gi|449067214|ref|YP_007434296.1|	-	0.0042	16.2	0.2	0.28	10.2	0.0	2.2	2	0	0	2	2	2	2	KaiC
Spindle_Spc25	PF08234.7	gi|449067214|ref|YP_007434296.1|	-	0.04	13.9	0.1	0.21	11.6	0.0	2.3	2	0	0	2	2	2	0	Chromosome	segregation	protein	Spc25
RNase_E_G	PF10150.4	gi|449067214|ref|YP_007434296.1|	-	0.055	12.6	0.0	0.1	11.8	0.0	1.5	1	0	0	1	1	1	0	Ribonuclease	E/G	family
Aconitase	PF00330.15	gi|449067215|ref|YP_007434297.1|	-	2.4e-128	428.5	0.0	4.5e-128	427.6	0.0	1.4	2	0	0	2	2	2	1	Aconitase	family	(aconitate	hydratase)
Aconitase_C	PF00694.14	gi|449067215|ref|YP_007434297.1|	-	2.6e-34	118.1	0.0	6e-34	116.9	0.0	1.6	1	0	0	1	1	1	1	Aconitase	C-terminal	domain
Cas_DxTHG	PF09455.5	gi|449067216|ref|YP_007434298.1|	-	2.4e-46	158.6	10.2	2.9e-46	158.3	7.1	1.1	1	0	0	1	1	1	1	CRISPR-associated	(Cas)	DxTHG	family
DUF2258	PF10015.4	gi|449067217|ref|YP_007434299.1|	-	7.8e-31	105.7	3.2	7.8e-31	105.7	2.2	2.1	2	0	0	2	2	2	1	Uncharacterized	protein	conserved	in	archaea	(DUF2258)
TMF_DNA_bd	PF12329.3	gi|449067217|ref|YP_007434299.1|	-	0.0042	16.8	10.3	0.0056	16.4	5.8	2.1	2	0	0	2	2	2	1	TATA	element	modulatory	factor	1	DNA	binding
AAA_11	PF13086.1	gi|449067217|ref|YP_007434299.1|	-	0.0096	15.5	2.0	0.011	15.3	1.4	1.2	1	0	0	1	1	1	1	AAA	domain
Spectrin	PF00435.16	gi|449067217|ref|YP_007434299.1|	-	0.013	15.8	1.1	0.035	14.3	0.8	1.7	1	0	0	1	1	1	0	Spectrin	repeat
ATG19_autophagy	PF12744.2	gi|449067217|ref|YP_007434299.1|	-	0.043	13.0	2.2	0.078	12.2	1.5	1.5	1	0	0	1	1	1	0	Autophagy	protein	Atg19,	Atg8-binding
DASH_Duo1	PF08651.5	gi|449067217|ref|YP_007434299.1|	-	0.044	13.3	0.7	0.13	11.8	0.6	1.7	2	0	0	2	2	2	0	DASH	complex	subunit	Duo1
V_ATPase_I	PF01496.14	gi|449067217|ref|YP_007434299.1|	-	0.045	11.6	5.0	0.046	11.5	3.5	1.1	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
DUF4140	PF13600.1	gi|449067217|ref|YP_007434299.1|	-	0.076	13.4	1.1	0.17	12.3	0.6	1.8	1	1	0	1	1	1	0	N-terminal	domain	of	unknown	function	(DUF4140)
NPV_P10	PF05531.7	gi|449067217|ref|YP_007434299.1|	-	0.086	13.0	1.1	0.086	13.0	0.8	2.1	2	0	0	2	2	2	0	Nucleopolyhedrovirus	P10	protein
Enkurin	PF13864.1	gi|449067217|ref|YP_007434299.1|	-	0.21	11.8	6.5	0.056	13.6	1.9	2.0	2	0	0	2	2	2	0	Calmodulin-binding
Dynamin_N	PF00350.18	gi|449067217|ref|YP_007434299.1|	-	0.34	10.7	2.4	0.31	10.8	0.8	1.5	2	0	0	2	2	2	0	Dynamin	family
DivIC	PF04977.10	gi|449067217|ref|YP_007434299.1|	-	0.89	9.0	7.7	0.2	11.1	2.3	2.1	2	0	0	2	2	2	0	Septum	formation	initiator
IncA	PF04156.9	gi|449067217|ref|YP_007434299.1|	-	0.98	8.9	6.4	1.3	8.5	4.0	1.4	1	1	0	1	1	1	0	IncA	protein
HR1	PF02185.11	gi|449067217|ref|YP_007434299.1|	-	1.1	9.0	9.1	2.2	8.0	6.2	1.8	1	1	0	1	1	1	0	Hr1	repeat
DUF342	PF03961.8	gi|449067217|ref|YP_007434299.1|	-	2.1	6.6	9.7	3.2	6.0	6.7	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
FUN14	PF04930.10	gi|449067218|ref|YP_007434300.1|	-	0.0051	17.0	7.9	0.22	11.8	5.5	2.1	1	1	0	1	1	1	1	FUN14	family
MtrC	PF04211.8	gi|449067218|ref|YP_007434300.1|	-	0.11	11.5	12.0	0.13	11.2	8.3	1.1	1	0	0	1	1	1	0	Tetrahydromethanopterin	S-methyltransferase,	subunit	C
MAGE	PF01454.14	gi|449067218|ref|YP_007434300.1|	-	0.16	11.2	0.1	0.18	11.1	0.1	1.2	1	0	0	1	1	1	0	MAGE	family
DUF4153	PF13687.1	gi|449067218|ref|YP_007434300.1|	-	0.18	11.2	10.9	0.057	12.9	4.4	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4153)
O-antigen_lig	PF13425.1	gi|449067218|ref|YP_007434300.1|	-	0.39	10.6	9.8	0.58	10.1	6.6	1.4	1	1	0	1	1	1	0	O-antigen	ligase	like	membrane	protein
DUF2628	PF10947.3	gi|449067218|ref|YP_007434300.1|	-	0.59	9.9	3.4	0.83	9.4	2.4	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2628)
DUF4118	PF13493.1	gi|449067218|ref|YP_007434300.1|	-	1.5	9.0	11.0	2.3	8.4	7.6	1.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4118)
DUF3487	PF11990.3	gi|449067218|ref|YP_007434300.1|	-	3.2	7.1	11.3	0.64	9.4	5.2	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3487)
Oxidored_q2	PF00420.19	gi|449067218|ref|YP_007434300.1|	-	3.5	7.2	8.7	6.1	6.5	6.0	1.5	1	1	0	1	1	1	0	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
VP7	PF00434.13	gi|449067218|ref|YP_007434300.1|	-	4.4	6.1	6.3	4.6	6.0	4.3	1.2	1	0	0	1	1	1	0	Glycoprotein	VP7
Fig1	PF12351.3	gi|449067218|ref|YP_007434300.1|	-	4.5	7.1	10.3	0.75	9.6	4.3	1.7	1	1	1	2	2	2	0	Ca2+	regulator	and	membrane	fusion	protein	Fig1
DUF2061	PF09834.4	gi|449067218|ref|YP_007434300.1|	-	5.2	7.3	6.8	4.3	7.5	3.0	2.2	2	1	0	2	2	2	0	Predicted	membrane	protein	(DUF2061)
FtsX	PF02687.16	gi|449067218|ref|YP_007434300.1|	-	8.4	6.1	17.3	2e+02	1.7	12.0	2.4	1	1	0	1	1	1	0	FtsX-like	permease	family
DUF3784	PF12650.2	gi|449067218|ref|YP_007434300.1|	-	9.1	6.2	10.9	6.1	6.8	4.9	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3784)
DUF4389	PF14333.1	gi|449067218|ref|YP_007434300.1|	-	9.3	6.0	11.5	13	5.5	6.3	2.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4389)
ATPase_gene1	PF09527.5	gi|449067218|ref|YP_007434300.1|	-	9.4	6.1	14.4	11	5.9	0.1	2.5	2	1	0	2	2	2	0	Putative	F0F1-ATPase	subunit	(ATPase_gene1)
YuiB	PF14068.1	gi|449067218|ref|YP_007434300.1|	-	9.9	6.5	13.9	29	5.0	9.6	1.7	1	1	0	1	1	1	0	Putative	membrane	protein
Phage_Gp15	PF06854.6	gi|449067219|ref|YP_007434301.1|	-	1.7	8.1	9.8	13	5.2	6.8	1.9	1	1	0	1	1	1	0	Bacteriophage	Gp15	protein
TrmB	PF01978.14	gi|449067220|ref|YP_007434302.1|	-	1.3e-11	44.0	0.5	2.1e-11	43.3	0.3	1.4	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
TFIIE_alpha	PF02002.12	gi|449067220|ref|YP_007434302.1|	-	3e-09	36.3	1.8	3.6e-09	36.0	1.2	1.1	1	0	0	1	1	1	1	TFIIE	alpha	subunit
MarR_2	PF12802.2	gi|449067220|ref|YP_007434302.1|	-	3e-08	33.2	0.0	6.9e-08	32.0	0.0	1.6	2	0	0	2	2	1	1	MarR	family
HTH_24	PF13412.1	gi|449067220|ref|YP_007434302.1|	-	1.8e-06	27.2	0.4	3.7e-06	26.2	0.3	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.17	gi|449067220|ref|YP_007434302.1|	-	2.7e-06	26.9	0.2	5.5e-06	25.9	0.0	1.6	2	0	0	2	2	1	1	MarR	family
HTH_11	PF08279.7	gi|449067220|ref|YP_007434302.1|	-	1.3e-05	24.7	0.9	3.6e-05	23.3	0.2	1.9	2	0	0	2	2	2	1	HTH	domain
HTH_20	PF12840.2	gi|449067220|ref|YP_007434302.1|	-	3.5e-05	23.4	0.1	0.00022	20.9	0.0	1.9	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_27	PF13463.1	gi|449067220|ref|YP_007434302.1|	-	0.00012	22.3	0.6	0.00019	21.6	0.1	1.5	2	0	0	2	2	1	1	Winged	helix	DNA-binding	domain
HTH_5	PF01022.15	gi|449067220|ref|YP_007434302.1|	-	0.00015	21.3	0.1	0.00026	20.5	0.1	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_DeoR	PF08220.7	gi|449067220|ref|YP_007434302.1|	-	0.0002	20.8	0.7	0.00042	19.7	0.1	1.7	2	0	0	2	2	2	1	DeoR-like	helix-turn-helix	domain
GntR	PF00392.16	gi|449067220|ref|YP_007434302.1|	-	0.00024	20.4	1.1	0.0018	17.6	0.0	2.2	2	1	0	2	2	2	1	Bacterial	regulatory	proteins,	gntR	family
Fe_dep_repress	PF01325.14	gi|449067220|ref|YP_007434302.1|	-	0.00056	19.8	0.1	0.0013	18.5	0.1	1.7	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_Crp_2	PF13545.1	gi|449067220|ref|YP_007434302.1|	-	0.00087	19.0	0.0	0.0015	18.2	0.0	1.4	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
Replic_Relax	PF13814.1	gi|449067220|ref|YP_007434302.1|	-	0.0012	18.7	0.0	0.0015	18.4	0.0	1.1	1	0	0	1	1	1	1	Replication-relaxation
HTH_34	PF13601.1	gi|449067220|ref|YP_007434302.1|	-	0.0039	17.1	0.4	0.0097	15.9	0.1	1.7	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
Rrf2	PF02082.15	gi|449067220|ref|YP_007434302.1|	-	0.0055	16.7	0.1	0.0096	16.0	0.0	1.4	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_36	PF13730.1	gi|449067220|ref|YP_007434302.1|	-	0.0094	16.0	1.1	0.013	15.5	0.1	1.7	2	0	0	2	2	1	1	Helix-turn-helix	domain
HTH_6	PF01418.12	gi|449067220|ref|YP_007434302.1|	-	0.01	15.5	0.3	0.019	14.6	0.0	1.6	2	0	0	2	2	1	0	Helix-turn-helix	domain,	rpiR	family
EAP30	PF04157.11	gi|449067220|ref|YP_007434302.1|	-	0.011	14.9	0.2	0.097	11.8	0.0	2.0	2	0	0	2	2	2	0	EAP30/Vps36	family
FeoC	PF09012.5	gi|449067220|ref|YP_007434302.1|	-	0.011	15.4	0.0	0.019	14.6	0.0	1.4	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
Penicillinase_R	PF03965.11	gi|449067220|ref|YP_007434302.1|	-	0.014	15.4	0.4	0.024	14.7	0.0	1.6	2	0	0	2	2	1	0	Penicillinase	repressor
GerE	PF00196.14	gi|449067220|ref|YP_007434302.1|	-	0.016	14.4	0.0	0.031	13.6	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
Cullin	PF00888.17	gi|449067220|ref|YP_007434302.1|	-	0.017	13.6	1.6	0.37	9.2	0.1	2.0	1	1	1	2	2	2	0	Cullin	family
HTH_Mga	PF08280.6	gi|449067220|ref|YP_007434302.1|	-	0.021	14.5	0.1	0.043	13.5	0.1	1.5	1	0	0	1	1	1	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
TBPIP	PF07106.8	gi|449067220|ref|YP_007434302.1|	-	0.034	13.6	2.1	0.072	12.6	1.5	1.5	1	1	0	1	1	1	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
HTH_38	PF13936.1	gi|449067220|ref|YP_007434302.1|	-	0.036	13.6	0.0	0.086	12.4	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_IclR	PF09339.5	gi|449067220|ref|YP_007434302.1|	-	0.044	13.3	0.0	0.083	12.4	0.0	1.5	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
Sulfolobus_pRN	PF05584.6	gi|449067220|ref|YP_007434302.1|	-	0.051	13.5	0.1	0.094	12.6	0.1	1.4	1	0	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
PadR	PF03551.9	gi|449067220|ref|YP_007434302.1|	-	0.081	12.7	0.7	0.25	11.1	0.1	2.1	1	1	1	2	2	2	0	Transcriptional	regulator	PadR-like	family
HTH_10	PF04967.7	gi|449067220|ref|YP_007434302.1|	-	0.082	12.5	0.1	0.17	11.4	0.0	1.5	1	0	0	1	1	1	0	HTH	DNA	binding	domain
z-alpha	PF02295.12	gi|449067220|ref|YP_007434302.1|	-	0.099	12.4	0.1	0.2	11.4	0.1	1.6	1	0	0	1	1	1	0	Adenosine	deaminase	z-alpha	domain
Phage_pRha	PF09669.5	gi|449067220|ref|YP_007434302.1|	-	0.099	13.0	0.1	0.14	12.5	0.1	1.3	1	0	0	1	1	1	0	Phage	regulatory	protein	Rha	(Phage_pRha)
DUF4393	PF14337.1	gi|449067220|ref|YP_007434302.1|	-	0.11	11.9	0.4	0.13	11.7	0.3	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4393)
AviRa	PF11599.3	gi|449067220|ref|YP_007434302.1|	-	0.12	11.4	0.2	0.14	11.1	0.1	1.1	1	0	0	1	1	1	0	RRNA	methyltransferase	AviRa
RuvB_C	PF05491.8	gi|449067220|ref|YP_007434302.1|	-	0.12	12.0	0.1	0.34	10.5	0.0	1.7	2	0	0	2	2	2	0	Holliday	junction	DNA	helicase	ruvB	C-terminus
Put_DNA-bind_N	PF06971.8	gi|449067220|ref|YP_007434302.1|	-	0.15	11.8	1.5	0.25	11.1	0.5	1.8	2	0	0	2	2	2	0	Putative	DNA-binding	protein	N-terminus
HDV_ag	PF01517.13	gi|449067220|ref|YP_007434302.1|	-	0.19	11.3	2.5	0.22	11.1	1.0	1.6	1	1	1	2	2	2	0	Hepatitis	delta	virus	delta	antigen
DUF4423	PF14394.1	gi|449067220|ref|YP_007434302.1|	-	0.21	11.1	1.3	0.23	11.0	0.1	1.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4423)
Peripla_BP_2	PF01497.13	gi|449067221|ref|YP_007434303.1|	-	6.9e-20	71.1	0.3	9.9e-20	70.6	0.2	1.2	1	0	0	1	1	1	1	Periplasmic	binding	protein
FecCD	PF01032.13	gi|449067222|ref|YP_007434304.1|	-	9.3e-67	225.0	38.2	1.2e-66	224.7	26.5	1.0	1	0	0	1	1	1	1	FecCD	transport	family
ABC-3	PF00950.12	gi|449067222|ref|YP_007434304.1|	-	2.9e-06	26.7	29.3	6.2e-06	25.6	20.3	1.5	1	1	0	1	1	1	1	ABC	3	transport	family
Tim17	PF02466.14	gi|449067222|ref|YP_007434304.1|	-	0.041	13.9	1.2	4.5	7.3	0.0	2.3	2	0	0	2	2	2	0	Tim17/Tim22/Tim23/Pmp24	family
ABC_tran	PF00005.22	gi|449067223|ref|YP_007434305.1|	-	1.1e-17	64.5	0.2	1.2e-16	61.2	0.1	2.1	1	1	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|449067223|ref|YP_007434305.1|	-	2.3e-15	57.3	3.0	2.1e-07	31.1	0.1	2.1	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|449067223|ref|YP_007434305.1|	-	4.6e-13	48.9	3.4	1.2e-06	27.9	0.3	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|449067223|ref|YP_007434305.1|	-	1.4e-10	40.8	6.2	4.4e-05	22.7	0.2	2.2	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|449067223|ref|YP_007434305.1|	-	6.5e-09	36.4	3.2	4.3e-08	33.7	2.2	1.9	1	1	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|449067223|ref|YP_007434305.1|	-	2.5e-05	24.1	0.4	3.8e-05	23.5	0.3	1.4	1	1	0	1	1	1	1	Archaeal	ATPase
AAA_29	PF13555.1	gi|449067223|ref|YP_007434305.1|	-	5.7e-05	22.5	0.0	0.00011	21.6	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
Adeno_IVa2	PF02456.10	gi|449067223|ref|YP_007434305.1|	-	0.00014	20.6	0.3	0.00017	20.3	0.2	1.3	1	1	0	1	1	1	1	Adenovirus	IVa2	protein
cobW	PF02492.14	gi|449067223|ref|YP_007434305.1|	-	0.00018	21.0	1.4	0.0004	19.8	0.3	2.1	1	1	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
T2SE	PF00437.15	gi|449067223|ref|YP_007434305.1|	-	0.00024	20.0	0.1	0.0004	19.3	0.1	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_22	PF13401.1	gi|449067223|ref|YP_007434305.1|	-	0.00046	20.3	0.1	0.00093	19.3	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|449067223|ref|YP_007434305.1|	-	0.00062	20.0	1.9	0.0086	16.3	1.3	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|449067223|ref|YP_007434305.1|	-	0.00064	19.7	0.0	0.0013	18.7	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
FtsK_SpoIIIE	PF01580.13	gi|449067223|ref|YP_007434305.1|	-	0.0015	18.0	0.5	0.0025	17.2	0.4	1.3	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
AAA_10	PF12846.2	gi|449067223|ref|YP_007434305.1|	-	0.0018	17.7	0.4	0.0018	17.7	0.2	1.4	1	1	0	1	1	1	1	AAA-like	domain
DUF258	PF03193.11	gi|449067223|ref|YP_007434305.1|	-	0.0032	16.6	0.1	0.0046	16.1	0.1	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_14	PF13173.1	gi|449067223|ref|YP_007434305.1|	-	0.0034	17.2	2.1	0.024	14.5	1.4	2.4	1	1	0	1	1	1	1	AAA	domain
NACHT	PF05729.7	gi|449067223|ref|YP_007434305.1|	-	0.0051	16.4	0.7	0.0097	15.5	0.1	1.7	2	0	0	2	2	2	1	NACHT	domain
AAA_19	PF13245.1	gi|449067223|ref|YP_007434305.1|	-	0.0056	16.3	0.1	0.012	15.3	0.0	1.5	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_24	PF13479.1	gi|449067223|ref|YP_007434305.1|	-	0.0065	16.0	0.9	0.026	14.0	0.1	2.1	2	1	1	3	3	3	1	AAA	domain
AAA_25	PF13481.1	gi|449067223|ref|YP_007434305.1|	-	0.0067	15.8	0.1	0.056	12.8	0.0	2.1	2	1	0	2	2	2	1	AAA	domain
SbcCD_C	PF13558.1	gi|449067223|ref|YP_007434305.1|	-	0.0074	16.1	0.1	0.079	12.8	0.1	2.1	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
Miro	PF08477.8	gi|449067223|ref|YP_007434305.1|	-	0.0075	16.7	0.0	0.015	15.8	0.0	1.6	1	1	0	1	1	1	1	Miro-like	protein
AAA_17	PF13207.1	gi|449067223|ref|YP_007434305.1|	-	0.0079	17.0	0.5	0.024	15.4	0.4	1.9	1	1	0	1	1	1	1	AAA	domain
ABC_ATPase	PF09818.4	gi|449067223|ref|YP_007434305.1|	-	0.008	14.8	0.3	0.013	14.0	0.2	1.3	1	0	0	1	1	1	1	Predicted	ATPase	of	the	ABC	class
AAA_13	PF13166.1	gi|449067223|ref|YP_007434305.1|	-	0.012	14.0	0.9	0.031	12.7	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
AAA_33	PF13671.1	gi|449067223|ref|YP_007434305.1|	-	0.014	15.3	0.0	0.036	13.9	0.0	1.8	1	1	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|449067223|ref|YP_007434305.1|	-	0.015	15.4	0.1	0.03	14.5	0.1	1.6	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
MobB	PF03205.9	gi|449067223|ref|YP_007434305.1|	-	0.022	14.4	0.4	0.072	12.7	0.1	2.0	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
G-alpha	PF00503.15	gi|449067223|ref|YP_007434305.1|	-	0.034	12.8	0.1	0.21	10.2	0.0	1.7	1	1	0	2	2	2	0	G-protein	alpha	subunit
AAA_11	PF13086.1	gi|449067223|ref|YP_007434305.1|	-	0.039	13.5	0.2	0.059	12.9	0.1	1.4	1	1	0	1	1	1	0	AAA	domain
NTPase_1	PF03266.10	gi|449067223|ref|YP_007434305.1|	-	0.049	13.3	2.6	0.43	10.2	0.1	2.2	2	0	0	2	2	2	0	NTPase
AAA_30	PF13604.1	gi|449067223|ref|YP_007434305.1|	-	0.051	13.1	0.0	0.094	12.2	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.7	gi|449067223|ref|YP_007434305.1|	-	0.058	12.4	0.0	0.11	11.5	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
DUF3584	PF12128.3	gi|449067223|ref|YP_007434305.1|	-	0.074	10.3	0.3	0.096	9.9	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
Mg_chelatase	PF01078.16	gi|449067223|ref|YP_007434305.1|	-	0.089	11.9	0.0	0.16	11.1	0.0	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
ATP_bind_1	PF03029.12	gi|449067223|ref|YP_007434305.1|	-	0.097	12.1	0.1	0.21	11.0	0.0	1.5	1	1	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
MraZ	PF02381.13	gi|449067223|ref|YP_007434305.1|	-	0.1	12.3	0.0	2.6	7.8	0.0	2.2	2	0	0	2	2	2	0	MraZ	protein
RNA_helicase	PF00910.17	gi|449067223|ref|YP_007434305.1|	-	0.12	12.5	0.5	0.32	11.1	0.0	2.0	2	1	0	2	2	2	0	RNA	helicase
SRP54	PF00448.17	gi|449067223|ref|YP_007434305.1|	-	0.12	11.7	2.3	0.46	9.9	0.2	2.5	1	1	2	3	3	3	0	SRP54-type	protein,	GTPase	domain
AAA_5	PF07728.9	gi|449067223|ref|YP_007434305.1|	-	0.13	11.9	0.1	0.64	9.7	0.0	2.0	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
MMR_HSR1	PF01926.18	gi|449067223|ref|YP_007434305.1|	-	0.15	12.0	0.8	0.28	11.1	0.5	1.5	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
DUF87	PF01935.12	gi|449067223|ref|YP_007434305.1|	-	0.35	10.6	3.0	7.4	6.3	0.3	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF87
IstB_IS21	PF01695.12	gi|449067223|ref|YP_007434305.1|	-	0.36	10.2	1.4	10	5.5	0.1	2.1	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
TrmB	PF01978.14	gi|449067224|ref|YP_007434306.1|	-	5.4e-11	42.0	1.3	8.6e-11	41.3	0.9	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|449067224|ref|YP_007434306.1|	-	6e-09	35.4	0.0	1.2e-08	34.5	0.0	1.4	2	0	0	2	2	1	1	MarR	family
HTH_DeoR	PF08220.7	gi|449067224|ref|YP_007434306.1|	-	6.7e-08	31.9	0.2	6.2e-07	28.8	0.0	2.2	2	0	0	2	2	2	1	DeoR-like	helix-turn-helix	domain
TFIIE_alpha	PF02002.12	gi|449067224|ref|YP_007434306.1|	-	4.9e-07	29.2	3.1	6.3e-07	28.8	2.2	1.1	1	0	0	1	1	1	1	TFIIE	alpha	subunit
MarR	PF01047.17	gi|449067224|ref|YP_007434306.1|	-	5.6e-07	29.1	0.1	1e-06	28.3	0.1	1.5	1	0	0	1	1	1	1	MarR	family
GntR	PF00392.16	gi|449067224|ref|YP_007434306.1|	-	1e-06	28.0	0.7	1.8e-06	27.2	0.1	1.6	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	gntR	family
HTH_24	PF13412.1	gi|449067224|ref|YP_007434306.1|	-	2.8e-06	26.5	0.6	5.4e-06	25.7	0.4	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_27	PF13463.1	gi|449067224|ref|YP_007434306.1|	-	3.3e-06	27.3	0.1	8.4e-06	26.0	0.0	1.7	2	0	0	2	2	1	1	Winged	helix	DNA-binding	domain
Fe_dep_repress	PF01325.14	gi|449067224|ref|YP_007434306.1|	-	2.8e-05	23.9	0.5	0.00026	20.8	0.3	2.3	1	1	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Rrf2	PF02082.15	gi|449067224|ref|YP_007434306.1|	-	3.5e-05	23.8	0.1	5.2e-05	23.2	0.0	1.4	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_5	PF01022.15	gi|449067224|ref|YP_007434306.1|	-	3.9e-05	23.2	0.1	7.7e-05	22.2	0.1	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|449067224|ref|YP_007434306.1|	-	4.3e-05	23.2	0.2	0.00011	21.8	0.0	1.7	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|449067224|ref|YP_007434306.1|	-	7.4e-05	22.3	1.0	0.00015	21.3	0.2	1.9	2	0	0	2	2	2	1	HTH	domain
HTH_34	PF13601.1	gi|449067224|ref|YP_007434306.1|	-	9.8e-05	22.3	0.4	0.0002	21.3	0.2	1.7	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_Crp_2	PF13545.1	gi|449067224|ref|YP_007434306.1|	-	0.00014	21.6	0.0	0.00025	20.7	0.0	1.6	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
Sulfolobus_pRN	PF05584.6	gi|449067224|ref|YP_007434306.1|	-	0.00028	20.7	0.5	0.00071	19.4	0.1	1.9	1	1	1	2	2	2	1	Sulfolobus	plasmid	regulatory	protein
FeoC	PF09012.5	gi|449067224|ref|YP_007434306.1|	-	0.00058	19.5	0.0	0.0021	17.7	0.0	1.9	2	0	0	2	2	2	1	FeoC	like	transcriptional	regulator
Cullin_Nedd8	PF10557.4	gi|449067224|ref|YP_007434306.1|	-	0.00095	18.9	2.6	0.062	13.1	0.1	3.0	3	0	0	3	3	3	1	Cullin	protein	neddylation	domain
UPF0122	PF04297.9	gi|449067224|ref|YP_007434306.1|	-	0.0013	18.7	3.3	0.015	15.3	2.3	2.1	1	1	0	1	1	1	1	Putative	helix-turn-helix	protein,	YlxM	/	p13	like
HxlR	PF01638.12	gi|449067224|ref|YP_007434306.1|	-	0.0019	17.8	0.3	0.0035	16.9	0.2	1.5	1	1	0	1	1	1	1	HxlR-like	helix-turn-helix
DUF4423	PF14394.1	gi|449067224|ref|YP_007434306.1|	-	0.019	14.5	0.2	0.023	14.2	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
Sigma70_r4	PF04545.11	gi|449067224|ref|YP_007434306.1|	-	0.024	13.9	0.2	0.1	11.9	0.0	2.1	1	1	1	2	2	2	0	Sigma-70,	region	4
HTH_36	PF13730.1	gi|449067224|ref|YP_007434306.1|	-	0.027	14.6	1.3	0.034	14.2	0.1	1.8	2	0	0	2	2	2	0	Helix-turn-helix	domain
PadR	PF03551.9	gi|449067224|ref|YP_007434306.1|	-	0.031	14.0	0.1	0.063	13.0	0.1	1.5	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
HTH_41	PF14502.1	gi|449067224|ref|YP_007434306.1|	-	0.032	13.8	0.6	0.096	12.3	0.0	1.9	2	0	0	2	2	2	0	Helix-turn-helix	domain
RTP	PF02334.11	gi|449067224|ref|YP_007434306.1|	-	0.042	13.8	0.7	0.058	13.3	0.5	1.4	1	1	0	1	1	1	0	Replication	terminator	protein
Homeobox	PF00046.24	gi|449067224|ref|YP_007434306.1|	-	0.064	12.8	0.6	0.68	9.5	0.1	2.3	2	0	0	2	2	2	0	Homeobox	domain
Penicillinase_R	PF03965.11	gi|449067224|ref|YP_007434306.1|	-	0.066	13.3	0.1	0.12	12.4	0.1	1.6	1	1	0	1	1	1	0	Penicillinase	repressor
HTH_9	PF08221.6	gi|449067224|ref|YP_007434306.1|	-	0.074	12.9	0.1	0.2	11.5	0.0	1.7	2	0	0	2	2	2	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
LexA_DNA_bind	PF01726.11	gi|449067224|ref|YP_007434306.1|	-	0.076	12.5	0.1	0.14	11.7	0.1	1.4	1	0	0	1	1	1	0	LexA	DNA	binding	domain
HTH_6	PF01418.12	gi|449067224|ref|YP_007434306.1|	-	0.085	12.5	0.2	0.25	11.1	0.0	1.9	2	0	0	2	2	2	0	Helix-turn-helix	domain,	rpiR	family
MRP-L20	PF12824.2	gi|449067224|ref|YP_007434306.1|	-	0.091	12.7	0.1	0.12	12.3	0.1	1.2	1	0	0	1	1	1	0	Mitochondrial	ribosomal	protein	subunit	L20
B-block_TFIIIC	PF04182.7	gi|449067224|ref|YP_007434306.1|	-	0.094	12.5	0.0	0.15	11.9	0.0	1.5	1	1	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
DUF910	PF06014.6	gi|449067224|ref|YP_007434306.1|	-	0.094	12.6	1.0	3.2	7.7	0.1	2.4	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF910)
DUF2250	PF10007.4	gi|449067224|ref|YP_007434306.1|	-	0.1	12.5	0.3	0.25	11.2	0.1	1.8	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Replic_Relax	PF13814.1	gi|449067224|ref|YP_007434306.1|	-	0.11	12.2	0.0	0.13	12.1	0.0	1.2	1	0	0	1	1	1	0	Replication-relaxation
DUF1198	PF06711.6	gi|449067224|ref|YP_007434306.1|	-	0.12	12.2	0.0	0.19	11.5	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1198)
Ribosomal_S13	PF00416.17	gi|449067224|ref|YP_007434306.1|	-	0.15	12.4	0.2	0.24	11.8	0.1	1.4	1	1	0	1	1	1	0	Ribosomal	protein	S13/S18
Mga	PF05043.8	gi|449067224|ref|YP_007434306.1|	-	0.17	12.1	3.5	0.15	12.3	1.0	2.0	2	1	0	2	2	2	0	Mga	helix-turn-helix	domain
LSM	PF01423.17	gi|449067225|ref|YP_007434307.1|	-	1.8e-22	78.6	0.9	2e-22	78.4	0.6	1.0	1	0	0	1	1	1	1	LSM	domain
SM-ATX	PF14438.1	gi|449067225|ref|YP_007434307.1|	-	0.0032	17.3	0.2	0.0042	16.9	0.1	1.2	1	0	0	1	1	1	1	Ataxin	2	SM	domain
DUF3901	PF13040.1	gi|449067225|ref|YP_007434307.1|	-	0.11	11.8	0.1	0.18	11.1	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3901)
DUF469	PF04320.9	gi|449067227|ref|YP_007434309.1|	-	0.039	14.7	0.2	0.45	11.3	0.0	2.0	2	0	0	2	2	2	0	Protein	with	unknown	function	(DUF469)
FAD_binding_7	PF03441.9	gi|449067228|ref|YP_007434310.1|	-	1.6e-79	266.9	0.6	2.2e-79	266.5	0.4	1.2	1	0	0	1	1	1	1	FAD	binding	domain	of	DNA	photolyase
DNA_photolyase	PF00875.13	gi|449067228|ref|YP_007434310.1|	-	3.4e-29	101.7	0.0	3.8e-28	98.3	0.0	2.1	2	0	0	2	2	2	1	DNA	photolyase
AAA_22	PF13401.1	gi|449067229|ref|YP_007434311.1|	-	0.00044	20.3	0.3	0.002	18.2	0.1	2.2	2	1	0	2	2	1	1	AAA	domain
AAA_17	PF13207.1	gi|449067229|ref|YP_007434311.1|	-	0.0025	18.6	0.2	0.011	16.5	0.2	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|449067229|ref|YP_007434311.1|	-	0.0028	17.9	0.6	0.0089	16.3	0.1	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|449067229|ref|YP_007434311.1|	-	0.0074	16.2	0.0	0.02	14.8	0.0	1.7	1	0	0	1	1	1	1	AAA	ATPase	domain
NB-ARC	PF00931.17	gi|449067229|ref|YP_007434311.1|	-	0.0081	15.0	0.0	0.02	13.7	0.0	1.6	1	0	0	1	1	1	1	NB-ARC	domain
AAA_24	PF13479.1	gi|449067229|ref|YP_007434311.1|	-	0.0084	15.7	0.1	0.017	14.7	0.1	1.5	1	0	0	1	1	1	1	AAA	domain
ABC_tran	PF00005.22	gi|449067229|ref|YP_007434311.1|	-	0.0095	16.2	0.5	0.1	12.9	0.0	2.3	2	0	0	2	2	2	1	ABC	transporter
Img2	PF05046.9	gi|449067229|ref|YP_007434311.1|	-	0.0096	16.1	3.6	0.53	10.5	0.1	3.1	2	1	1	3	3	3	1	Mitochondrial	large	subunit	ribosomal	protein	(Img2)
AAA_30	PF13604.1	gi|449067229|ref|YP_007434311.1|	-	0.0099	15.4	0.0	0.018	14.6	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
NTPase_1	PF03266.10	gi|449067229|ref|YP_007434311.1|	-	0.03	14.0	0.1	0.03	14.0	0.1	2.1	3	0	0	3	3	3	0	NTPase
AAA_25	PF13481.1	gi|449067229|ref|YP_007434311.1|	-	0.033	13.5	0.1	0.081	12.3	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
NACHT	PF05729.7	gi|449067229|ref|YP_007434311.1|	-	0.037	13.7	0.0	0.14	11.8	0.0	1.9	2	0	0	2	2	2	0	NACHT	domain
AAA_5	PF07728.9	gi|449067229|ref|YP_007434311.1|	-	0.053	13.2	0.2	0.34	10.6	0.0	2.3	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
DUF258	PF03193.11	gi|449067229|ref|YP_007434311.1|	-	0.059	12.5	0.1	0.13	11.4	0.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
NEP	PF10167.4	gi|449067229|ref|YP_007434311.1|	-	0.062	13.0	0.6	0.16	11.6	0.4	1.6	1	0	0	1	1	1	0	Uncharacterised	conserved	protein
DUF4222	PF13973.1	gi|449067229|ref|YP_007434311.1|	-	0.086	12.2	0.1	0.23	10.8	0.1	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4222)
AAA_19	PF13245.1	gi|449067229|ref|YP_007434311.1|	-	0.13	12.0	0.0	0.32	10.7	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
MarR	PF01047.17	gi|449067230|ref|YP_007434312.1|	-	0.0029	17.2	0.0	0.0064	16.1	0.0	1.5	1	0	0	1	1	1	1	MarR	family
Rrf2	PF02082.15	gi|449067230|ref|YP_007434312.1|	-	0.028	14.5	0.0	0.044	13.8	0.0	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
MarR_2	PF12802.2	gi|449067230|ref|YP_007434312.1|	-	0.041	13.5	0.0	0.08	12.6	0.0	1.4	1	0	0	1	1	1	0	MarR	family
HTH_27	PF13463.1	gi|449067230|ref|YP_007434312.1|	-	0.071	13.4	0.1	0.16	12.3	0.0	1.6	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
RPA_C	PF08784.6	gi|449067230|ref|YP_007434312.1|	-	0.073	13.4	0.0	0.14	12.5	0.0	1.4	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
DUF2250	PF10007.4	gi|449067230|ref|YP_007434312.1|	-	0.088	12.7	0.6	0.15	11.9	0.1	1.7	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
TrmB	PF01978.14	gi|449067230|ref|YP_007434312.1|	-	0.091	12.4	0.7	0.22	11.2	0.1	2.0	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
TENA_THI-4	PF03070.11	gi|449067231|ref|YP_007434313.1|	-	8.2e-39	133.5	1.4	9.4e-39	133.3	1.0	1.0	1	0	0	1	1	1	1	TENA/THI-4/PQQC	family
PTB	PF08416.8	gi|449067231|ref|YP_007434313.1|	-	0.014	15.2	0.1	0.57	10.0	0.0	2.1	2	0	0	2	2	2	0	Phosphotyrosine-binding	domain
HPHLAWLY	PF14925.1	gi|449067231|ref|YP_007434313.1|	-	0.12	10.2	0.0	0.17	9.8	0.0	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function
DUF2029	PF09594.5	gi|449067232|ref|YP_007434314.1|	-	9.1e-05	22.0	3.8	9.1e-05	22.0	2.6	3.3	2	1	0	3	3	3	1	Protein	of	unknown	function	(DUF2029)
adh_short	PF00106.20	gi|449067233|ref|YP_007434315.1|	-	1e-34	119.8	0.2	1.4e-34	119.4	0.2	1.2	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|449067233|ref|YP_007434315.1|	-	8.5e-28	97.7	0.1	1e-27	97.4	0.1	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|449067233|ref|YP_007434315.1|	-	1.3e-12	47.7	0.2	2.1e-12	47.0	0.1	1.2	1	0	0	1	1	1	1	KR	domain
HAD	PF12710.2	gi|449067233|ref|YP_007434315.1|	-	0.023	14.8	0.1	0.054	13.6	0.1	1.7	1	1	1	2	2	2	0	haloacid	dehalogenase-like	hydrolase
Polysacc_synt_2	PF02719.10	gi|449067233|ref|YP_007434315.1|	-	0.029	13.2	0.1	0.04	12.7	0.1	1.2	1	0	0	1	1	1	0	Polysaccharide	biosynthesis	protein
3HCDH_N	PF02737.13	gi|449067233|ref|YP_007434315.1|	-	0.05	13.2	0.2	0.076	12.6	0.1	1.2	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Epimerase	PF01370.16	gi|449067233|ref|YP_007434315.1|	-	0.086	12.2	0.2	0.2	11.0	0.1	1.8	1	1	0	1	1	1	0	NAD	dependent	epimerase/dehydratase	family
DUF488	PF04343.8	gi|449067234|ref|YP_007434316.1|	-	1.1e-33	116.1	0.0	1.3e-33	115.9	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF488
HGD-D	PF06050.8	gi|449067234|ref|YP_007434316.1|	-	0.12	11.1	0.0	0.15	10.8	0.0	1.2	1	0	0	1	1	1	0	2-hydroxyglutaryl-CoA	dehydratase,	D-component
Cupin_2	PF07883.6	gi|449067235|ref|YP_007434317.1|	-	2.1e-19	68.7	0.2	3.5e-19	68.0	0.2	1.3	1	0	0	1	1	1	1	Cupin	domain
MannoseP_isomer	PF01050.13	gi|449067235|ref|YP_007434317.1|	-	2.5e-08	33.6	0.1	2.9e-08	33.4	0.1	1.1	1	0	0	1	1	1	1	Mannose-6-phosphate	isomerase
Auxin_BP	PF02041.11	gi|449067235|ref|YP_007434317.1|	-	1.5e-07	31.0	0.1	4.2e-07	29.5	0.1	1.7	1	1	0	1	1	1	1	Auxin	binding	protein
AraC_binding	PF02311.14	gi|449067235|ref|YP_007434317.1|	-	1e-06	28.4	0.0	1.2e-06	28.2	0.0	1.1	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
Cupin_1	PF00190.17	gi|449067235|ref|YP_007434317.1|	-	2.7e-06	26.8	0.1	5.8e-06	25.8	0.1	1.5	1	1	0	1	1	1	1	Cupin
Cupin_3	PF05899.7	gi|449067235|ref|YP_007434317.1|	-	0.0012	18.1	0.1	0.0043	16.3	0.0	1.9	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF861)
Ectoine_synth	PF06339.7	gi|449067235|ref|YP_007434317.1|	-	0.008	16.0	0.0	0.011	15.7	0.0	1.1	1	0	0	1	1	1	1	Ectoine	synthase
JmjC	PF02373.17	gi|449067235|ref|YP_007434317.1|	-	0.012	15.8	0.1	0.021	15.0	0.1	1.5	1	1	0	1	1	1	0	JmjC	domain,	hydroxylase
Cupin_7	PF12973.2	gi|449067235|ref|YP_007434317.1|	-	0.072	12.9	0.0	0.11	12.3	0.0	1.5	1	0	0	1	1	1	0	ChrR	Cupin-like	domain
EutQ	PF06249.7	gi|449067235|ref|YP_007434317.1|	-	0.086	12.3	0.0	0.21	11.1	0.0	1.6	1	1	1	2	2	2	0	Ethanolamine	utilisation	protein	EutQ
CENP-C_C	PF11699.3	gi|449067235|ref|YP_007434317.1|	-	0.095	12.6	0.1	0.12	12.3	0.1	1.3	1	0	0	1	1	1	0	Mif2/CENP-C	like
Tail_P2_I	PF09684.5	gi|449067236|ref|YP_007434318.1|	-	0.019	14.4	0.0	0.024	14.1	0.0	1.3	1	1	0	1	1	1	0	Phage	tail	protein	(Tail_P2_I)
Rsd_AlgQ	PF04353.8	gi|449067236|ref|YP_007434318.1|	-	0.057	13.1	0.2	0.063	12.9	0.1	1.1	1	0	0	1	1	1	0	Regulator	of	RNA	polymerase	sigma(70)	subunit,	Rsd/AlgQ
PIN	PF01850.16	gi|449067237|ref|YP_007434319.1|	-	9.7e-11	42.0	0.1	1.2e-10	41.7	0.1	1.1	1	0	0	1	1	1	1	PIN	domain
PIN_3	PF13470.1	gi|449067237|ref|YP_007434319.1|	-	0.00014	22.4	0.0	0.00019	22.0	0.0	1.3	1	1	0	1	1	1	1	PIN	domain
Phage_int_SAM_3	PF14659.1	gi|449067237|ref|YP_007434319.1|	-	0.14	12.4	1.8	0.2	11.9	0.2	1.9	2	0	0	2	2	2	0	Phage	integrase,	N-terminal	SAM-like	domain
UPF0126	PF03458.8	gi|449067240|ref|YP_007434322.1|	-	2.1e-44	149.0	22.4	3e-24	84.4	4.6	2.4	3	0	0	3	3	3	2	UPF0126	domain
TPR_11	PF13414.1	gi|449067241|ref|YP_007434323.1|	-	1.3e-33	114.4	16.3	3.1e-15	55.5	0.7	4.8	3	1	2	5	5	5	3	TPR	repeat
TPR_2	PF07719.12	gi|449067241|ref|YP_007434323.1|	-	2.5e-24	83.1	16.6	1.2e-05	24.8	0.1	8.0	8	0	0	8	8	8	4	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|449067241|ref|YP_007434323.1|	-	2.6e-20	72.5	7.5	4.8e-07	30.2	0.0	5.0	2	1	2	5	5	5	3	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|449067241|ref|YP_007434323.1|	-	3.7e-20	70.6	24.9	9.3e-07	28.1	0.2	7.2	8	1	0	8	8	8	4	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|449067241|ref|YP_007434323.1|	-	1.9e-17	61.9	9.5	3.7e-05	23.5	0.1	5.8	4	2	2	6	6	6	3	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|449067241|ref|YP_007434323.1|	-	1.1e-16	59.3	25.5	2.1e-05	23.9	0.4	6.3	6	1	1	7	7	6	4	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|449067241|ref|YP_007434323.1|	-	1e-13	50.9	12.8	0.0005	19.9	0.5	5.3	2	2	1	4	4	4	3	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|449067241|ref|YP_007434323.1|	-	3.8e-13	49.5	14.1	0.00011	22.4	0.3	5.2	3	2	2	5	5	5	3	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|449067241|ref|YP_007434323.1|	-	2e-10	40.3	3.0	1.7	9.4	0.1	6.3	4	2	1	6	6	6	2	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|449067241|ref|YP_007434323.1|	-	9.2e-09	34.4	4.1	0.091	12.6	0.6	5.5	4	1	0	4	4	4	2	Tetratricopeptide	repeat
NARP1	PF12569.3	gi|449067241|ref|YP_007434323.1|	-	2e-07	30.1	5.2	0.016	13.9	0.1	3.4	1	1	1	3	3	3	3	NMDA	receptor-regulated	protein	1
TPR_21	PF09976.4	gi|449067241|ref|YP_007434323.1|	-	4.3e-07	29.9	1.3	0.12	12.3	0.0	4.2	3	2	1	4	4	4	2	Tetratricopeptide	repeat
TPR_9	PF13371.1	gi|449067241|ref|YP_007434323.1|	-	5e-07	29.4	0.1	0.38	10.6	0.0	5.5	3	3	3	6	6	6	2	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|449067241|ref|YP_007434323.1|	-	3.6e-06	27.0	8.7	0.63	10.2	0.0	3.9	2	2	1	3	3	3	3	Anaphase-promoting	complex,	cyclosome,	subunit	3
FAT	PF02259.18	gi|449067241|ref|YP_007434323.1|	-	4.6e-05	22.5	0.2	0.16	10.9	0.0	2.3	2	0	0	2	2	2	2	FAT	domain
TPR_6	PF13174.1	gi|449067241|ref|YP_007434323.1|	-	0.00013	22.2	16.2	2.2	8.9	0.2	6.6	7	1	1	8	8	7	2	Tetratricopeptide	repeat
MIT	PF04212.13	gi|449067241|ref|YP_007434323.1|	-	0.00016	21.4	6.2	0.0023	17.7	0.8	3.8	2	2	1	3	3	3	1	MIT	(microtubule	interacting	and	transport)	domain
Coatomer_E	PF04733.9	gi|449067241|ref|YP_007434323.1|	-	0.00023	20.4	0.5	0.00023	20.4	0.4	1.9	2	1	0	2	2	2	1	Coatomer	epsilon	subunit
DUF3366	PF11846.3	gi|449067241|ref|YP_007434323.1|	-	0.00025	21.0	0.3	0.23	11.3	0.1	2.1	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF3366)
TPR_10	PF13374.1	gi|449067241|ref|YP_007434323.1|	-	0.0009	19.0	1.6	0.47	10.4	0.2	3.9	2	1	1	3	3	3	1	Tetratricopeptide	repeat
TPR_20	PF14561.1	gi|449067241|ref|YP_007434323.1|	-	0.011	15.8	1.0	6.8	6.8	0.1	4.2	2	2	2	5	5	5	0	Tetratricopeptide	repeat
Clathrin	PF00637.15	gi|449067241|ref|YP_007434323.1|	-	0.022	14.3	9.3	0.015	14.9	3.2	2.5	2	1	0	2	2	2	0	Region	in	Clathrin	and	VPS
ATP-synt_F	PF01990.12	gi|449067241|ref|YP_007434323.1|	-	0.029	14.7	0.8	0.1	13.0	0.6	1.9	1	1	1	2	2	2	0	ATP	synthase	(F/14-kDa)	subunit
DUF3856	PF12968.2	gi|449067241|ref|YP_007434323.1|	-	0.029	14.1	2.5	28	4.4	0.0	3.7	1	1	3	4	4	4	0	Domain	of	Unknown	Function	(DUF3856)
DUF1296	PF06972.6	gi|449067241|ref|YP_007434323.1|	-	0.037	13.9	0.5	21	5.1	0.0	3.6	3	1	0	4	4	3	0	Protein	of	unknown	function	(DUF1296)
PTS_IIA	PF02255.11	gi|449067241|ref|YP_007434323.1|	-	0.13	12.1	0.6	4	7.3	0.0	2.9	2	1	1	3	3	3	0	PTS	system,	Lactose/Cellobiose	specific	IIA	subunit
ATP-synt_DE	PF00401.15	gi|449067241|ref|YP_007434323.1|	-	0.59	10.0	5.1	3.2	7.6	0.4	3.1	3	0	0	3	3	2	0	ATP	synthase,	Delta/Epsilon	chain,	long	alpha-helix	domain
DAO	PF01266.19	gi|449067242|ref|YP_007434324.1|	-	3.5e-11	42.6	0.4	0.00022	20.2	0.0	2.3	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|449067242|ref|YP_007434324.1|	-	6.7e-09	35.6	0.2	1.5e-08	34.5	0.2	1.6	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox	PF00070.22	gi|449067242|ref|YP_007434324.1|	-	2e-08	34.4	3.9	0.0001	22.6	0.3	2.5	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|449067242|ref|YP_007434324.1|	-	1.9e-06	26.6	1.6	0.0017	16.8	0.3	2.2	2	0	0	2	2	2	2	HI0933-like	protein
FAD_binding_2	PF00890.19	gi|449067242|ref|YP_007434324.1|	-	5.7e-06	25.4	0.4	0.013	14.3	0.4	2.1	2	0	0	2	2	2	2	FAD	binding	domain
GDI	PF00996.13	gi|449067242|ref|YP_007434324.1|	-	6.8e-06	24.6	0.5	0.012	13.9	0.0	2.3	2	0	0	2	2	2	2	GDP	dissociation	inhibitor
Thi4	PF01946.12	gi|449067242|ref|YP_007434324.1|	-	1.8e-05	23.9	3.2	0.0034	16.4	0.2	2.3	2	0	0	2	2	2	2	Thi4	family
FAD_binding_3	PF01494.14	gi|449067242|ref|YP_007434324.1|	-	0.00027	20.1	0.8	0.0004	19.5	0.6	1.2	1	0	0	1	1	1	1	FAD	binding	domain
Amino_oxidase	PF01593.19	gi|449067242|ref|YP_007434324.1|	-	0.00033	19.8	1.5	0.042	12.9	1.0	2.3	1	1	0	1	1	1	1	Flavin	containing	amine	oxidoreductase
Pyr_redox_2	PF07992.9	gi|449067242|ref|YP_007434324.1|	-	0.0019	18.0	0.0	0.02	14.7	0.0	2.4	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_oxidored	PF12831.2	gi|449067242|ref|YP_007434324.1|	-	0.002	17.3	3.0	0.0067	15.5	0.2	2.1	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
GIDA	PF01134.17	gi|449067242|ref|YP_007434324.1|	-	0.002	17.0	1.8	0.09	11.6	0.3	2.4	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
UDPG_MGDP_dh_N	PF03721.9	gi|449067242|ref|YP_007434324.1|	-	0.0046	16.3	0.1	0.0079	15.5	0.1	1.3	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Pyr_redox_3	PF13738.1	gi|449067242|ref|YP_007434324.1|	-	0.01	15.9	0.2	0.19	11.7	0.1	2.2	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_10	PF13460.1	gi|449067242|ref|YP_007434324.1|	-	0.015	15.2	2.1	1.5	8.7	0.1	2.2	2	0	0	2	2	2	0	NADH(P)-binding
NAD_binding_7	PF13241.1	gi|449067242|ref|YP_007434324.1|	-	0.037	14.2	0.2	0.11	12.7	0.0	1.9	2	0	0	2	2	2	0	Putative	NAD(P)-binding
3HCDH_N	PF02737.13	gi|449067242|ref|YP_007434324.1|	-	0.05	13.2	3.0	2.8	7.5	0.2	2.4	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
XdhC_C	PF13478.1	gi|449067242|ref|YP_007434324.1|	-	0.067	13.5	0.1	3	8.1	0.0	2.3	2	0	0	2	2	2	0	XdhC	Rossmann	domain
CUE	PF02845.11	gi|449067242|ref|YP_007434324.1|	-	0.074	12.5	0.1	0.16	11.4	0.1	1.6	1	0	0	1	1	1	0	CUE	domain
Trp_halogenase	PF04820.9	gi|449067242|ref|YP_007434324.1|	-	0.083	11.4	5.1	0.1	11.2	0.2	2.2	2	0	0	2	2	2	0	Tryptophan	halogenase
Lycopene_cycl	PF05834.7	gi|449067242|ref|YP_007434324.1|	-	0.27	10.0	1.4	0.25	10.2	0.2	1.4	2	0	0	2	2	2	0	Lycopene	cyclase	protein
4HBT	PF03061.17	gi|449067243|ref|YP_007434325.1|	-	2.8e-15	56.1	0.1	4e-15	55.7	0.1	1.2	1	0	0	1	1	1	1	Thioesterase	superfamily
4HBT_3	PF13622.1	gi|449067243|ref|YP_007434325.1|	-	0.0027	17.4	0.0	0.0036	17.1	0.0	1.1	1	0	0	1	1	1	1	Thioesterase-like	superfamily
TrmB	PF01978.14	gi|449067244|ref|YP_007434326.1|	-	5.3e-11	42.0	0.1	7e-11	41.6	0.1	1.1	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_27	PF13463.1	gi|449067244|ref|YP_007434326.1|	-	7.1e-08	32.6	0.1	1e-07	32.1	0.1	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR	PF01047.17	gi|449067244|ref|YP_007434326.1|	-	2.1e-07	30.5	0.9	3.1e-07	29.9	0.6	1.3	1	0	0	1	1	1	1	MarR	family
HTH_11	PF08279.7	gi|449067244|ref|YP_007434326.1|	-	3.4e-07	29.8	0.3	5.7e-07	29.0	0.2	1.4	1	0	0	1	1	1	1	HTH	domain
TFIIE_alpha	PF02002.12	gi|449067244|ref|YP_007434326.1|	-	3.2e-06	26.6	0.7	3.7e-06	26.3	0.5	1.2	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HTH_Crp_2	PF13545.1	gi|449067244|ref|YP_007434326.1|	-	1.4e-05	24.7	0.0	2.3e-05	24.0	0.0	1.4	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
DUF387	PF04079.11	gi|449067244|ref|YP_007434326.1|	-	1.5e-05	24.3	0.0	1.9e-05	24.0	0.0	1.1	1	0	0	1	1	1	1	Putative	transcriptional	regulators	(Ypuh-like)
MarR_2	PF12802.2	gi|449067244|ref|YP_007434326.1|	-	3.8e-05	23.2	0.0	5.1e-05	22.8	0.0	1.2	1	0	0	1	1	1	1	MarR	family
HTH_5	PF01022.15	gi|449067244|ref|YP_007434326.1|	-	4.4e-05	23.0	0.1	6.5e-05	22.5	0.1	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
GntR	PF00392.16	gi|449067244|ref|YP_007434326.1|	-	8.5e-05	21.9	0.0	0.00014	21.1	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
Fe_dep_repress	PF01325.14	gi|449067244|ref|YP_007434326.1|	-	0.00013	21.8	0.2	0.00024	20.9	0.1	1.4	1	1	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DUF4423	PF14394.1	gi|449067244|ref|YP_007434326.1|	-	0.00041	19.9	0.0	0.00047	19.7	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
HTH_24	PF13412.1	gi|449067244|ref|YP_007434326.1|	-	0.00044	19.5	0.3	0.00081	18.7	0.2	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
PadR	PF03551.9	gi|449067244|ref|YP_007434326.1|	-	0.00062	19.4	0.1	0.00099	18.8	0.1	1.3	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_DeoR	PF08220.7	gi|449067244|ref|YP_007434326.1|	-	0.00079	18.9	0.2	0.0014	18.1	0.1	1.4	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
HTH_20	PF12840.2	gi|449067244|ref|YP_007434326.1|	-	0.0023	17.7	0.0	0.0038	17.0	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|449067244|ref|YP_007434326.1|	-	0.0039	17.2	0.0	0.0057	16.7	0.0	1.2	1	0	0	1	1	1	1	Transcriptional	regulator
B-block_TFIIIC	PF04182.7	gi|449067244|ref|YP_007434326.1|	-	0.0055	16.5	0.1	0.0094	15.7	0.1	1.4	1	0	0	1	1	1	1	B-block	binding	subunit	of	TFIIIC
DUF2250	PF10007.4	gi|449067244|ref|YP_007434326.1|	-	0.0076	16.1	0.1	0.01	15.7	0.1	1.3	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Tfb2	PF03849.9	gi|449067244|ref|YP_007434326.1|	-	0.0078	14.8	0.1	0.0086	14.7	0.0	1.0	1	0	0	1	1	1	1	Transcription	factor	Tfb2
HrcA_DNA-bdg	PF03444.10	gi|449067244|ref|YP_007434326.1|	-	0.0079	15.6	0.2	0.013	14.9	0.2	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
Phage_rep_org_N	PF09681.5	gi|449067244|ref|YP_007434326.1|	-	0.016	14.8	0.4	0.019	14.5	0.2	1.3	1	1	0	1	1	1	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
Phage_rep_O	PF04492.8	gi|449067244|ref|YP_007434326.1|	-	0.019	15.1	0.1	0.034	14.3	0.0	1.4	1	0	0	1	1	1	0	Bacteriophage	replication	protein	O
FeoC	PF09012.5	gi|449067244|ref|YP_007434326.1|	-	0.031	13.9	0.1	0.046	13.4	0.1	1.3	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
DDRGK	PF09756.4	gi|449067244|ref|YP_007434326.1|	-	0.036	13.4	0.1	0.053	12.9	0.1	1.2	1	0	0	1	1	1	0	DDRGK	domain
Penicillinase_R	PF03965.11	gi|449067244|ref|YP_007434326.1|	-	0.055	13.5	0.4	0.089	12.8	0.2	1.4	1	1	0	1	1	1	0	Penicillinase	repressor
DUF2513	PF10711.4	gi|449067244|ref|YP_007434326.1|	-	0.062	13.3	0.1	0.098	12.7	0.1	1.4	1	1	0	1	1	1	0	Hypothetical	protein	(DUF2513)
EAP30	PF04157.11	gi|449067244|ref|YP_007434326.1|	-	0.064	12.4	0.0	0.082	12.0	0.0	1.2	1	0	0	1	1	1	0	EAP30/Vps36	family
HTH_36	PF13730.1	gi|449067244|ref|YP_007434326.1|	-	0.065	13.3	0.1	0.094	12.8	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
Ribosomal_S25	PF03297.10	gi|449067244|ref|YP_007434326.1|	-	0.076	13.0	0.7	0.1	12.6	0.1	1.6	2	0	0	2	2	2	0	S25	ribosomal	protein
HTH_10	PF04967.7	gi|449067244|ref|YP_007434326.1|	-	0.084	12.4	0.0	0.14	11.7	0.0	1.4	1	0	0	1	1	1	0	HTH	DNA	binding	domain
Sulfolobus_pRN	PF05584.6	gi|449067244|ref|YP_007434326.1|	-	0.089	12.7	0.4	0.13	12.2	0.3	1.3	1	0	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
Fis1_TPR_C	PF14853.1	gi|449067245|ref|YP_007434327.1|	-	0.089	12.6	1.0	0.32	10.8	0.2	2.4	2	2	1	3	3	3	0	Fis1	C-terminal	tetratricopeptide	repeat
Tex_N	PF09371.5	gi|449067245|ref|YP_007434327.1|	-	0.091	12.0	3.0	0.15	11.3	1.4	1.8	1	1	1	2	2	2	0	Tex-like	protein	N-terminal	domain
GLTP	PF08718.6	gi|449067245|ref|YP_007434327.1|	-	0.14	12.2	0.7	0.24	11.4	0.1	1.6	1	1	1	2	2	2	0	Glycolipid	transfer	protein	(GLTP)
AAA_23	PF13476.1	gi|449067245|ref|YP_007434327.1|	-	0.18	12.0	3.5	0.23	11.7	2.5	1.3	1	0	0	1	1	1	0	AAA	domain
NAD_synthase	PF02540.12	gi|449067245|ref|YP_007434327.1|	-	0.55	9.0	5.1	0.12	11.2	0.6	1.8	2	0	0	2	2	2	0	NAD	synthase
GHMP_kinases_N	PF00288.21	gi|449067246|ref|YP_007434328.1|	-	1.4e-14	53.8	0.0	5.7e-14	51.9	0.0	2.0	2	0	0	2	2	2	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|449067246|ref|YP_007434328.1|	-	0.0017	18.4	0.0	0.0055	16.8	0.0	1.9	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
GHMP_kinases_N	PF00288.21	gi|449067247|ref|YP_007434329.1|	-	5.9e-11	42.2	1.1	1.2e-10	41.2	0.8	1.5	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
MethyltransfD12	PF02086.10	gi|449067247|ref|YP_007434329.1|	-	0.042	13.2	0.2	0.17	11.3	0.0	1.9	2	0	0	2	2	2	0	D12	class	N6	adenine-specific	DNA	methyltransferase
HD	PF01966.17	gi|449067248|ref|YP_007434330.1|	-	2.9e-14	53.1	0.0	7.2e-14	51.8	0.0	1.8	1	0	0	1	1	1	1	HD	domain
HDOD	PF08668.7	gi|449067248|ref|YP_007434330.1|	-	0.0022	17.2	0.0	0.0039	16.4	0.0	1.5	1	0	0	1	1	1	1	HDOD	domain
PNP_UDP_1	PF01048.15	gi|449067249|ref|YP_007434331.1|	-	5.1e-39	133.6	0.0	6.4e-39	133.3	0.0	1.1	1	0	0	1	1	1	1	Phosphorylase	superfamily
DUF711	PF05167.7	gi|449067249|ref|YP_007434331.1|	-	0.025	13.3	0.0	0.035	12.8	0.0	1.2	1	0	0	1	1	1	0	Uncharacterised	ACR	(DUF711)
PapC_N	PF13954.1	gi|449067250|ref|YP_007434332.1|	-	0.14	11.7	0.0	0.14	11.7	0.0	1.1	1	0	0	1	1	1	0	PapC	N-terminal	domain
Glycos_transf_1	PF00534.15	gi|449067251|ref|YP_007434333.1|	-	1.9e-36	125.0	0.2	3e-36	124.4	0.2	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|449067251|ref|YP_007434333.1|	-	9.9e-13	48.4	0.0	2.9e-12	46.8	0.0	1.7	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|449067251|ref|YP_007434333.1|	-	6.5e-07	29.5	0.0	1.8e-06	28.1	0.0	1.7	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_transf_20	PF00982.16	gi|449067251|ref|YP_007434333.1|	-	2.5e-05	22.9	0.8	0.0043	15.5	0.8	2.3	1	1	1	2	2	2	2	Glycosyltransferase	family	20
RRM_2	PF04059.7	gi|449067251|ref|YP_007434333.1|	-	0.0068	16.3	0.2	0.12	12.3	0.0	2.7	3	0	0	3	3	3	1	RNA	recognition	motif	2
Glyco_hydro_15	PF00723.16	gi|449067252|ref|YP_007434334.1|	-	7.6e-45	153.2	0.0	5.7e-44	150.4	0.1	1.9	1	1	1	2	2	2	1	Glycosyl	hydrolases	family	15
DUF1237	PF06824.6	gi|449067252|ref|YP_007434334.1|	-	0.0008	18.1	0.1	0.0036	15.9	0.0	2.0	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF1237)
TPR_19	PF14559.1	gi|449067252|ref|YP_007434334.1|	-	0.022	15.0	0.1	0.081	13.2	0.0	1.9	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|449067252|ref|YP_007434334.1|	-	0.071	13.7	0.0	0.28	11.9	0.0	2.0	1	0	0	1	1	1	0	Tetratricopeptide	repeat
Serpin	PF00079.15	gi|449067252|ref|YP_007434334.1|	-	0.17	11.0	0.0	0.27	10.3	0.0	1.3	1	0	0	1	1	1	0	Serpin	(serine	protease	inhibitor)
DUF21	PF01595.15	gi|449067253|ref|YP_007434335.1|	-	0.71	9.1	10.0	3	7.0	6.9	1.9	1	1	0	1	1	1	0	Domain	of	unknown	function	DUF21
GWT1	PF06423.7	gi|449067253|ref|YP_007434335.1|	-	1.2	9.2	6.8	0.53	10.3	2.6	1.8	1	1	1	2	2	2	0	GWT1
Macro	PF01661.16	gi|449067254|ref|YP_007434336.1|	-	1.6e-36	124.7	0.0	2e-36	124.4	0.0	1.1	1	0	0	1	1	1	1	Macro	domain
Lactamase_B	PF00753.22	gi|449067255|ref|YP_007434337.1|	-	3.7e-06	26.7	5.0	3.3e-05	23.6	3.5	2.1	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|449067255|ref|YP_007434337.1|	-	0.00057	19.4	0.0	0.00092	18.7	0.0	1.4	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
FMN_red	PF03358.10	gi|449067257|ref|YP_007434339.1|	-	4.3e-38	130.2	0.0	5.7e-38	129.8	0.0	1.2	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.12	gi|449067257|ref|YP_007434339.1|	-	9.1e-08	31.8	0.0	1.2e-07	31.5	0.0	1.2	1	0	0	1	1	1	1	Flavodoxin-like	fold
DUF1987	PF09345.5	gi|449067257|ref|YP_007434339.1|	-	0.023	14.4	0.1	0.042	13.6	0.1	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1987)
MFS_1	PF07690.11	gi|449067258|ref|YP_007434340.1|	-	1.7e-35	122.4	51.6	9.3e-21	73.9	20.5	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_1_like	PF12832.2	gi|449067258|ref|YP_007434340.1|	-	0.0005	19.8	16.0	0.061	13.1	0.1	4.8	4	1	0	4	4	4	3	MFS_1	like	family
4HBT_2	PF13279.1	gi|449067259|ref|YP_007434341.1|	-	6.1e-08	33.1	0.0	7.4e-08	32.8	0.0	1.1	1	0	0	1	1	1	1	Thioesterase-like	superfamily
4HBT	PF03061.17	gi|449067259|ref|YP_007434341.1|	-	1.2e-06	28.5	0.0	1.7e-06	28.0	0.0	1.3	1	0	0	1	1	1	1	Thioesterase	superfamily
NTP_transferase	PF00483.18	gi|449067261|ref|YP_007434343.1|	-	4.9e-33	114.4	0.0	5.7e-33	114.2	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|449067261|ref|YP_007434343.1|	-	1.2e-09	38.4	0.0	1.6e-09	38.0	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.14	gi|449067261|ref|YP_007434343.1|	-	0.002	17.6	0.0	0.0032	17.0	0.0	1.3	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
DNA_binding_1	PF01035.15	gi|449067262|ref|YP_007434344.1|	-	1e-26	92.4	0.0	1.3e-26	92.1	0.0	1.1	1	0	0	1	1	1	1	6-O-methylguanine	DNA	methyltransferase,	DNA	binding	domain
Sigma70_r4_2	PF08281.7	gi|449067262|ref|YP_007434344.1|	-	0.0051	16.2	0.0	0.0092	15.4	0.0	1.4	1	0	0	1	1	1	1	Sigma-70,	region	4
Methyltransf_1N	PF02870.10	gi|449067262|ref|YP_007434344.1|	-	0.027	15.0	0.0	0.1	13.2	0.0	2.0	1	1	0	1	1	1	0	6-O-methylguanine	DNA	methyltransferase,	ribonuclease-like	domain
tRNA-synt_2b	PF00587.20	gi|449067263|ref|YP_007434345.1|	-	1.4e-39	135.4	0.1	2.2e-39	134.7	0.1	1.3	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|449067263|ref|YP_007434345.1|	-	3.8e-18	65.2	3.2	4.4e-18	65.0	0.9	2.1	2	0	0	2	2	2	1	Anticodon	binding	domain
Glyco_tran_28_C	PF04101.11	gi|449067264|ref|YP_007434346.1|	-	1.1e-11	44.6	0.0	2.3e-11	43.6	0.0	1.5	1	0	0	1	1	1	1	Glycosyltransferase	family	28	C-terminal	domain
Glyco_trans_1_3	PF13528.1	gi|449067264|ref|YP_007434346.1|	-	1.2e-08	34.5	0.0	5.5e-08	32.3	0.0	1.8	2	0	0	2	2	2	1	Glycosyl	transferase	family	1
HhH-GPD	PF00730.20	gi|449067265|ref|YP_007434347.1|	-	2.2e-12	47.2	0.0	3.3e-12	46.6	0.0	1.3	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
DUF4332	PF14229.1	gi|449067265|ref|YP_007434347.1|	-	6.3e-05	22.9	0.2	0.00039	20.3	0.3	2.0	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4332)
HHH_5	PF14520.1	gi|449067265|ref|YP_007434347.1|	-	0.00015	21.8	2.4	0.0075	16.4	1.7	2.7	1	1	0	1	1	1	1	Helix-hairpin-helix	domain
Sec63	PF02889.11	gi|449067265|ref|YP_007434347.1|	-	0.0012	18.1	0.1	0.0017	17.6	0.1	1.1	1	0	0	1	1	1	1	Sec63	Brl	domain
HHH	PF00633.18	gi|449067265|ref|YP_007434347.1|	-	0.01	15.5	0.3	0.041	13.5	0.0	2.1	2	0	0	2	2	2	0	Helix-hairpin-helix	motif
CBS	PF00571.23	gi|449067265|ref|YP_007434347.1|	-	0.092	12.5	0.1	0.47	10.2	0.0	2.1	2	0	0	2	2	2	0	CBS	domain
EndIII_4Fe-2S	PF10576.4	gi|449067265|ref|YP_007434347.1|	-	0.18	12.0	2.1	0.31	11.3	1.5	1.4	1	0	0	1	1	1	0	Iron-sulfur	binding	domain	of	endonuclease	III
RNA_pol_A_CTD	PF03118.10	gi|449067265|ref|YP_007434347.1|	-	0.39	10.1	3.3	0.98	8.8	0.3	2.8	3	0	0	3	3	3	0	Bacterial	RNA	polymerase,	alpha	chain	C	terminal	domain
ATP-grasp_2	PF08442.5	gi|449067266|ref|YP_007434348.1|	-	5.4e-28	97.7	4.0	3.1e-27	95.3	0.8	3.0	2	2	0	2	2	2	1	ATP-grasp	domain
Ligase_CoA	PF00549.14	gi|449067266|ref|YP_007434348.1|	-	1.1e-15	57.6	0.3	2e-15	56.6	0.2	1.4	1	0	0	1	1	1	1	CoA-ligase
ATP-grasp_5	PF13549.1	gi|449067266|ref|YP_007434348.1|	-	1.6e-06	27.4	0.0	0.062	12.5	0.0	3.8	2	1	0	3	3	3	2	ATP-grasp	domain
CoA_binding	PF02629.14	gi|449067267|ref|YP_007434349.1|	-	3.5e-23	81.9	2.1	3.5e-23	81.9	1.5	2.5	2	1	0	2	2	2	1	CoA	binding	domain
Ligase_CoA	PF00549.14	gi|449067267|ref|YP_007434349.1|	-	1.1e-12	47.8	1.3	1.9e-12	47.0	0.9	1.3	1	0	0	1	1	1	1	CoA-ligase
CoA_binding_2	PF13380.1	gi|449067267|ref|YP_007434349.1|	-	2.8e-08	33.9	0.0	6e-08	32.8	0.0	1.6	1	0	0	1	1	1	1	CoA	binding	domain
Succ_CoA_lig	PF13607.1	gi|449067267|ref|YP_007434349.1|	-	2.3e-07	30.4	0.0	4.3e-07	29.6	0.0	1.5	1	0	0	1	1	1	1	Succinyl-CoA	ligase	like	flavodoxin	domain
GFO_IDH_MocA	PF01408.17	gi|449067267|ref|YP_007434349.1|	-	0.0038	17.7	0.1	0.011	16.2	0.0	1.7	2	0	0	2	2	2	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
DUF4369	PF14289.1	gi|449067268|ref|YP_007434350.1|	-	3.3	7.7	6.3	3.8	7.5	0.6	3.1	3	1	0	3	3	3	0	Domain	of	unknown	function	(DUF4369)
Pro_CA	PF00484.14	gi|449067269|ref|YP_007434351.1|	-	3.9e-07	30.1	0.1	2e-06	27.8	0.0	2.0	2	0	0	2	2	2	1	Carbonic	anhydrase
DUF373	PF04123.8	gi|449067270|ref|YP_007434352.1|	-	4.8	6.1	13.0	0.3	10.0	4.5	1.9	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF373)
DUF204	PF02659.10	gi|449067270|ref|YP_007434352.1|	-	9.1	6.4	13.9	1.2	9.3	0.6	3.1	3	0	0	3	3	3	0	Domain	of	unknown	function	DUF
DUF4492	PF14899.1	gi|449067271|ref|YP_007434353.1|	-	0.0058	16.0	0.6	0.015	14.7	0.1	1.9	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4492)
STT3	PF02516.9	gi|449067273|ref|YP_007434355.1|	-	2.3e-21	76.3	44.7	2.3e-21	76.3	31.0	2.0	2	0	0	2	2	2	1	Oligosaccharyl	transferase	STT3	subunit
Nop10p	PF04135.7	gi|449067274|ref|YP_007434356.1|	-	6.8e-25	86.5	2.9	7.4e-25	86.4	2.0	1.0	1	0	0	1	1	1	1	Nucleolar	RNA-binding	protein,	Nop10p	family
Elf1	PF05129.8	gi|449067274|ref|YP_007434356.1|	-	0.032	13.9	0.0	0.04	13.6	0.0	1.3	1	1	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
NOB1_Zn_bind	PF08772.6	gi|449067274|ref|YP_007434356.1|	-	0.09	12.6	0.1	0.098	12.4	0.1	1.3	1	0	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
EIF_2_alpha	PF07541.7	gi|449067275|ref|YP_007434357.1|	-	1.7e-27	95.4	0.3	1.7e-27	95.4	0.2	1.9	2	1	0	2	2	2	1	Eukaryotic	translation	initiation	factor	2	alpha	subunit
S1	PF00575.18	gi|449067275|ref|YP_007434357.1|	-	8.2e-13	48.2	4.8	2.5e-12	46.6	0.1	2.6	2	0	0	2	2	2	1	S1	RNA	binding	domain
DUF2372	PF10178.4	gi|449067275|ref|YP_007434357.1|	-	0.0039	17.2	0.9	0.2	11.8	0.0	2.9	2	1	1	3	3	3	1	Uncharacterised	conserved	protein	(DUF2372)
N6_N4_Mtase	PF01555.13	gi|449067275|ref|YP_007434357.1|	-	0.026	14.0	2.0	0.035	13.6	1.4	1.2	1	0	0	1	1	1	0	DNA	methylase
CH	PF00307.26	gi|449067275|ref|YP_007434357.1|	-	0.11	12.5	0.5	0.97	9.5	0.1	2.4	2	1	1	3	3	3	0	Calponin	homology	(CH)	domain
Ribosomal_S27e	PF01667.12	gi|449067276|ref|YP_007434358.1|	-	3.7e-19	68.0	1.5	4.2e-19	67.8	1.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S27
DUF3797	PF12677.2	gi|449067276|ref|YP_007434358.1|	-	0.00046	19.7	2.4	0.35	10.5	0.3	2.1	1	1	1	2	2	2	2	Domain	of	unknown	function	(DUF3797)
DNA_RNApol_7kD	PF03604.8	gi|449067276|ref|YP_007434358.1|	-	0.0014	18.0	1.4	0.0033	16.8	0.9	1.7	1	1	0	1	1	1	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
HypA	PF01155.14	gi|449067276|ref|YP_007434358.1|	-	0.012	15.2	0.1	0.013	15.2	0.1	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
RNA_pol_N	PF01194.12	gi|449067276|ref|YP_007434358.1|	-	0.059	13.4	0.2	0.059	13.4	0.1	1.7	2	0	0	2	2	2	0	RNA	polymerases	N	/	8	kDa	subunit
DUF951	PF06107.6	gi|449067276|ref|YP_007434358.1|	-	0.074	12.5	1.5	1.6	8.2	0.0	2.2	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF951)
zinc_ribbon_2	PF13240.1	gi|449067276|ref|YP_007434358.1|	-	0.077	12.4	3.1	0.88	9.1	1.9	2.3	1	1	1	2	2	2	0	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|449067276|ref|YP_007434358.1|	-	0.095	11.9	2.4	0.57	9.4	0.0	2.2	1	1	1	2	2	2	0	zinc-ribbon	domain
eIF-5_eIF-2B	PF01873.12	gi|449067276|ref|YP_007434358.1|	-	0.1	12.2	0.5	0.12	12.0	0.4	1.2	1	0	0	1	1	1	0	Domain	found	in	IF2B/IF5
TF_Zn_Ribbon	PF08271.7	gi|449067276|ref|YP_007434358.1|	-	0.11	11.8	0.3	0.18	11.1	0.2	1.4	1	0	0	1	1	1	0	TFIIB	zinc-binding
TFIIS_C	PF01096.13	gi|449067276|ref|YP_007434358.1|	-	0.28	10.8	3.2	15	5.3	2.2	2.2	1	1	1	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zf-trcl	PF13451.1	gi|449067276|ref|YP_007434358.1|	-	0.57	9.8	3.8	5.8	6.6	0.3	2.1	1	1	1	2	2	2	0	Probable	zinc-binding	domain
zinc_ribbon_5	PF13719.1	gi|449067276|ref|YP_007434358.1|	-	0.86	9.2	6.4	8.4	6.0	1.2	2.5	2	2	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|449067276|ref|YP_007434358.1|	-	1.2	8.9	6.5	12	5.7	0.1	2.5	2	2	0	2	2	2	0	zinc-ribbon	domain
zf-CCHC_6	PF15288.1	gi|449067276|ref|YP_007434358.1|	-	8	6.2	6.7	35	4.1	0.1	2.4	2	0	0	2	2	2	0	Zinc	knuckle
Ribosomal_L44	PF00935.14	gi|449067277|ref|YP_007434359.1|	-	1.1e-28	99.0	8.9	1.1e-28	99.0	6.1	1.6	1	1	1	2	2	2	1	Ribosomal	protein	L44
Ribosomal_L33	PF00471.15	gi|449067277|ref|YP_007434359.1|	-	0.068	13.4	1.7	0.068	13.4	1.2	2.8	2	1	0	2	2	2	0	Ribosomal	protein	L33
zf-FPG_IleRS	PF06827.9	gi|449067277|ref|YP_007434359.1|	-	0.094	12.3	0.8	6.2	6.5	0.1	2.4	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
zf-ribbon_3	PF13248.1	gi|449067277|ref|YP_007434359.1|	-	0.097	11.9	0.4	4.6	6.5	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF2082	PF09855.4	gi|449067277|ref|YP_007434359.1|	-	0.11	12.3	1.8	2.7	7.9	0.1	2.2	2	0	0	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
zf-UBR	PF02207.15	gi|449067277|ref|YP_007434359.1|	-	0.12	12.1	1.9	4.8	6.9	0.1	2.1	2	0	0	2	2	2	0	Putative	zinc	finger	in	N-recognin	(UBR	box)
Adeno_E4_34	PF04528.8	gi|449067277|ref|YP_007434359.1|	-	0.14	11.7	0.8	0.59	9.7	0.0	1.9	1	1	1	2	2	2	0	Adenovirus	early	E4	34	kDa	protein	conserved	region
PyrI_C	PF02748.10	gi|449067277|ref|YP_007434359.1|	-	0.14	11.5	1.2	0.42	10.0	0.1	2.0	2	0	0	2	2	2	0	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
zf-PARP	PF00645.13	gi|449067277|ref|YP_007434359.1|	-	0.19	11.9	2.1	0.2	11.8	0.2	1.9	2	0	0	2	2	2	0	Poly(ADP-ribose)	polymerase	and	DNA-Ligase	Zn-finger	region
HECT_2	PF09814.4	gi|449067277|ref|YP_007434359.1|	-	0.2	10.3	1.8	0.23	10.1	1.2	1.3	1	1	0	1	1	1	0	HECT-like	Ubiquitin-conjugating	enzyme	(E2)-binding
Cys_rich_KTR	PF14205.1	gi|449067277|ref|YP_007434359.1|	-	0.27	10.7	3.5	1	8.8	0.2	2.2	2	0	0	2	2	2	0	Cysteine-rich	KTR
zinc_ribbon_5	PF13719.1	gi|449067277|ref|YP_007434359.1|	-	0.35	10.4	5.1	4.1	7.0	0.2	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|449067277|ref|YP_007434359.1|	-	0.37	10.5	5.3	3.3	7.4	0.2	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
DZR	PF12773.2	gi|449067277|ref|YP_007434359.1|	-	0.45	10.3	4.2	1.4	8.7	2.9	1.7	1	1	0	1	1	1	0	Double	zinc	ribbon
zinc_ribbon_2	PF13240.1	gi|449067277|ref|YP_007434359.1|	-	0.68	9.4	4.2	1.5	8.3	0.5	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
TFIIS_C	PF01096.13	gi|449067277|ref|YP_007434359.1|	-	1	9.0	4.1	13	5.5	0.3	2.4	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
Pox_A6	PF04924.7	gi|449067278|ref|YP_007434360.1|	-	0.034	12.9	0.6	0.041	12.6	0.4	1.1	1	0	0	1	1	1	0	Poxvirus	A6	protein
DNA_primase_S	PF01896.14	gi|449067279|ref|YP_007434361.1|	-	7.4e-16	58.2	0.0	1.5e-15	57.2	0.0	1.5	1	0	0	1	1	1	1	Eukaryotic	and	archaeal	DNA	primase	small	subunit
DUF2365	PF10157.4	gi|449067279|ref|YP_007434361.1|	-	0.03	14.2	0.0	0.049	13.5	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2365)
PCNA_N	PF00705.13	gi|449067280|ref|YP_007434362.1|	-	1.5e-10	40.6	0.1	4.1e-10	39.2	0.0	1.6	2	0	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	N-terminal	domain
PCNA_C	PF02747.10	gi|449067280|ref|YP_007434362.1|	-	0.00056	19.8	0.0	0.0081	16.0	0.0	2.7	2	1	1	3	3	3	1	Proliferating	cell	nuclear	antigen,	C-terminal	domain
Rad9	PF04139.8	gi|449067280|ref|YP_007434362.1|	-	0.0056	15.8	0.0	0.0068	15.5	0.0	1.1	1	0	0	1	1	1	1	Rad9
ATP_bind_1	PF03029.12	gi|449067281|ref|YP_007434363.1|	-	1.3e-57	195.0	0.1	1.5e-57	194.8	0.0	1.0	1	0	0	1	1	1	1	Conserved	hypothetical	ATP	binding	protein
AAA_17	PF13207.1	gi|449067281|ref|YP_007434363.1|	-	3.2e-06	27.9	0.1	8.8e-06	26.5	0.0	1.7	2	1	0	2	2	1	1	AAA	domain
CbiA	PF01656.18	gi|449067281|ref|YP_007434363.1|	-	4.9e-05	22.8	0.2	9.6e-05	21.8	0.1	1.5	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
PduV-EutP	PF10662.4	gi|449067281|ref|YP_007434363.1|	-	0.00012	21.5	0.0	0.011	15.2	0.0	2.7	2	1	0	2	2	2	1	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_18	PF13238.1	gi|449067281|ref|YP_007434363.1|	-	0.00035	20.8	0.1	0.00076	19.7	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|449067281|ref|YP_007434363.1|	-	0.00037	20.5	0.0	0.0016	18.4	0.0	2.0	2	0	0	2	2	2	1	AAA	ATPase	domain
DUF87	PF01935.12	gi|449067281|ref|YP_007434363.1|	-	0.00045	20.0	0.1	0.0011	18.8	0.0	1.7	2	0	0	2	2	1	1	Domain	of	unknown	function	DUF87
cobW	PF02492.14	gi|449067281|ref|YP_007434363.1|	-	0.0007	19.0	0.1	0.044	13.2	0.0	2.4	2	1	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
SRP54	PF00448.17	gi|449067281|ref|YP_007434363.1|	-	0.0011	18.4	0.0	0.018	14.4	0.0	2.1	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
T2SE	PF00437.15	gi|449067281|ref|YP_007434363.1|	-	0.0021	17.0	0.0	0.0033	16.3	0.0	1.2	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_29	PF13555.1	gi|449067281|ref|YP_007434363.1|	-	0.0022	17.5	0.0	0.0041	16.6	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
MMR_HSR1	PF01926.18	gi|449067281|ref|YP_007434363.1|	-	0.0025	17.7	0.0	0.0079	16.1	0.0	1.7	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
NACHT	PF05729.7	gi|449067281|ref|YP_007434363.1|	-	0.0026	17.4	0.0	0.005	16.5	0.0	1.5	1	0	0	1	1	1	1	NACHT	domain
AAA_24	PF13479.1	gi|449067281|ref|YP_007434363.1|	-	0.0026	17.3	0.0	0.0036	16.9	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
Dynamin_N	PF00350.18	gi|449067281|ref|YP_007434363.1|	-	0.003	17.3	0.1	0.89	9.3	0.0	2.3	2	0	0	2	2	2	1	Dynamin	family
MobB	PF03205.9	gi|449067281|ref|YP_007434363.1|	-	0.0034	17.0	0.0	0.0077	15.9	0.0	1.6	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NB-ARC	PF00931.17	gi|449067281|ref|YP_007434363.1|	-	0.0038	16.1	0.0	0.0078	15.1	0.0	1.4	1	0	0	1	1	1	1	NB-ARC	domain
AAA_22	PF13401.1	gi|449067281|ref|YP_007434363.1|	-	0.004	17.3	0.0	0.013	15.6	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
NTPase_1	PF03266.10	gi|449067281|ref|YP_007434363.1|	-	0.0042	16.7	0.1	0.38	10.4	0.0	2.4	3	0	0	3	3	2	1	NTPase
AAA_28	PF13521.1	gi|449067281|ref|YP_007434363.1|	-	0.0047	16.8	0.0	0.0068	16.3	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|449067281|ref|YP_007434363.1|	-	0.006	16.0	0.0	0.0084	15.5	0.0	1.2	1	0	0	1	1	1	1	AAA-like	domain
GTP_EFTU	PF00009.22	gi|449067281|ref|YP_007434363.1|	-	0.0067	15.8	0.1	1.2	8.5	0.0	2.9	2	1	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
DUF258	PF03193.11	gi|449067281|ref|YP_007434363.1|	-	0.0072	15.5	0.0	0.039	13.1	0.0	2.0	1	1	0	1	1	1	1	Protein	of	unknown	function,	DUF258
Septin	PF00735.13	gi|449067281|ref|YP_007434363.1|	-	0.012	14.6	0.0	0.26	10.2	0.0	2.3	2	1	0	2	2	2	0	Septin
PhoH	PF02562.11	gi|449067281|ref|YP_007434363.1|	-	0.013	14.6	0.0	0.021	14.0	0.0	1.3	1	0	0	1	1	1	0	PhoH-like	protein
AAA_30	PF13604.1	gi|449067281|ref|YP_007434363.1|	-	0.014	14.9	0.0	0.027	14.0	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
ABC_tran	PF00005.22	gi|449067281|ref|YP_007434363.1|	-	0.014	15.6	0.0	0.022	15.0	0.0	1.5	1	0	0	1	1	1	0	ABC	transporter
KTI12	PF08433.5	gi|449067281|ref|YP_007434363.1|	-	0.014	14.5	0.0	0.048	12.8	0.0	1.8	3	0	0	3	3	2	0	Chromatin	associated	protein	KTI12
ArgK	PF03308.11	gi|449067281|ref|YP_007434363.1|	-	0.016	13.9	0.0	0.027	13.2	0.0	1.2	1	0	0	1	1	1	0	ArgK	protein
G-alpha	PF00503.15	gi|449067281|ref|YP_007434363.1|	-	0.019	13.6	0.0	0.04	12.6	0.0	1.5	1	0	0	1	1	1	0	G-protein	alpha	subunit
FeoB_N	PF02421.13	gi|449067281|ref|YP_007434363.1|	-	0.019	14.2	0.1	0.65	9.2	0.0	2.4	2	0	0	2	2	2	0	Ferrous	iron	transport	protein	B
KAP_NTPase	PF07693.9	gi|449067281|ref|YP_007434363.1|	-	0.02	13.9	0.0	0.021	13.8	0.0	1.4	1	1	0	1	1	1	0	KAP	family	P-loop	domain
Miro	PF08477.8	gi|449067281|ref|YP_007434363.1|	-	0.022	15.2	0.0	0.28	11.6	0.0	2.4	2	0	0	2	2	2	0	Miro-like	protein
ArsA_ATPase	PF02374.10	gi|449067281|ref|YP_007434363.1|	-	0.023	13.7	0.0	0.033	13.2	0.0	1.4	1	0	0	1	1	1	0	Anion-transporting	ATPase
Viral_helicase1	PF01443.13	gi|449067281|ref|YP_007434363.1|	-	0.028	13.9	0.0	0.062	12.8	0.0	1.6	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
AAA_19	PF13245.1	gi|449067281|ref|YP_007434363.1|	-	0.032	13.9	0.0	0.052	13.2	0.0	1.4	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_14	PF13173.1	gi|449067281|ref|YP_007434363.1|	-	0.037	13.9	0.2	0.15	11.9	0.0	2.1	1	1	0	2	2	2	0	AAA	domain
Arch_ATPase	PF01637.13	gi|449067281|ref|YP_007434363.1|	-	0.061	13.0	0.0	0.16	11.6	0.0	1.7	1	0	0	1	1	1	0	Archaeal	ATPase
UPF0079	PF02367.12	gi|449067281|ref|YP_007434363.1|	-	0.062	12.9	0.2	0.15	11.6	0.1	1.7	2	1	0	2	2	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
Zeta_toxin	PF06414.7	gi|449067281|ref|YP_007434363.1|	-	0.063	12.3	0.0	0.093	11.8	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
PIF1	PF05970.9	gi|449067281|ref|YP_007434363.1|	-	0.069	12.0	0.0	0.13	11.1	0.0	1.4	1	0	0	1	1	1	0	PIF1-like	helicase
RNA_helicase	PF00910.17	gi|449067281|ref|YP_007434363.1|	-	0.087	13.0	0.0	0.3	11.2	0.0	2.0	2	0	0	2	2	1	0	RNA	helicase
Arf	PF00025.16	gi|449067281|ref|YP_007434363.1|	-	0.089	12.0	0.0	0.15	11.2	0.0	1.4	1	0	0	1	1	1	0	ADP-ribosylation	factor	family
APS_kinase	PF01583.15	gi|449067281|ref|YP_007434363.1|	-	0.095	12.3	0.0	0.19	11.3	0.0	1.5	1	0	0	1	1	1	0	Adenylylsulphate	kinase
AAA_32	PF13654.1	gi|449067281|ref|YP_007434363.1|	-	0.1	11.2	0.0	0.17	10.5	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
SMC_N	PF02463.14	gi|449067281|ref|YP_007434363.1|	-	0.11	11.6	0.0	0.22	10.7	0.0	1.4	1	0	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
TrwB_AAD_bind	PF10412.4	gi|449067281|ref|YP_007434363.1|	-	0.12	10.9	0.0	0.22	10.1	0.0	1.3	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
CPT	PF07931.7	gi|449067281|ref|YP_007434363.1|	-	0.13	11.9	0.0	0.24	10.9	0.0	1.5	1	0	0	1	1	1	0	Chloramphenicol	phosphotransferase-like	protein
AAA_33	PF13671.1	gi|449067281|ref|YP_007434363.1|	-	0.14	12.0	0.0	0.21	11.4	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
Pribosyltran_N	PF13793.1	gi|449067282|ref|YP_007434364.1|	-	6.7e-28	96.7	0.0	5.8e-27	93.7	0.0	2.1	2	0	0	2	2	2	1	N-terminal	domain	of	ribose	phosphate	pyrophosphokinase
Pribosyltran	PF00156.22	gi|449067282|ref|YP_007434364.1|	-	7.8e-15	54.7	0.2	2.3e-14	53.2	0.1	1.8	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
Pribosyl_synth	PF14572.1	gi|449067282|ref|YP_007434364.1|	-	1e-12	48.2	1.9	1e-12	48.2	1.3	1.8	2	0	0	2	2	2	1	Phosphoribosyl	synthetase-associated	domain
UPRTase	PF14681.1	gi|449067282|ref|YP_007434364.1|	-	0.00013	21.2	0.2	0.00028	20.1	0.1	1.6	2	0	0	2	2	2	1	Uracil	phosphoribosyltransferase
PRTase_2	PF15609.1	gi|449067282|ref|YP_007434364.1|	-	0.0058	15.9	0.8	0.0079	15.5	0.1	1.6	2	0	0	2	2	2	1	Phosphoribosyl	transferase
PRTase_3	PF15610.1	gi|449067282|ref|YP_007434364.1|	-	0.058	12.3	0.1	0.091	11.6	0.0	1.3	1	0	0	1	1	1	0	PRTase	ComF-like
UPF0020	PF01170.13	gi|449067283|ref|YP_007434365.1|	-	4.9e-29	101.1	0.0	1e-28	100.1	0.0	1.4	2	0	0	2	2	2	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_26	PF13659.1	gi|449067283|ref|YP_007434365.1|	-	4.6e-12	46.0	0.0	7.8e-12	45.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
N6_N4_Mtase	PF01555.13	gi|449067283|ref|YP_007434365.1|	-	9.1e-12	44.9	0.1	4.8e-10	39.3	0.0	2.1	2	0	0	2	2	2	1	DNA	methylase
Methyltransf_31	PF13847.1	gi|449067283|ref|YP_007434365.1|	-	3.4e-07	29.9	0.0	1.1e-06	28.3	0.0	1.8	2	0	0	2	2	2	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|449067283|ref|YP_007434365.1|	-	0.00017	21.0	0.0	0.00037	19.9	0.0	1.5	1	1	1	2	2	2	1	Conserved	hypothetical	protein	95
Methyltransf_15	PF09445.5	gi|449067283|ref|YP_007434365.1|	-	0.00043	19.8	0.0	0.00082	18.9	0.0	1.6	1	1	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
MethyltransfD12	PF02086.10	gi|449067283|ref|YP_007434365.1|	-	0.0053	16.2	0.9	0.044	13.2	0.0	2.4	2	1	1	3	3	3	1	D12	class	N6	adenine-specific	DNA	methyltransferase
Methyltransf_18	PF12847.2	gi|449067283|ref|YP_007434365.1|	-	0.0069	16.9	0.0	0.014	15.9	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|449067283|ref|YP_007434365.1|	-	0.028	13.5	0.0	0.045	12.8	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_25	PF13649.1	gi|449067283|ref|YP_007434365.1|	-	0.031	14.6	0.0	0.065	13.5	0.0	1.6	1	0	0	1	1	1	0	Methyltransferase	domain
N6_Mtase	PF02384.11	gi|449067283|ref|YP_007434365.1|	-	0.043	12.8	0.0	0.094	11.7	0.0	1.5	1	0	0	1	1	1	0	N-6	DNA	Methylase
Eco57I	PF07669.6	gi|449067283|ref|YP_007434365.1|	-	0.059	13.7	0.0	0.3	11.4	0.0	2.1	2	0	0	2	2	2	0	Eco57I	restriction-modification	methylase
Methyltransf_11	PF08241.7	gi|449067283|ref|YP_007434365.1|	-	0.066	13.7	0.0	0.19	12.2	0.0	1.8	2	0	0	2	2	2	0	Methyltransferase	domain
Lactamase_B_2	PF12706.2	gi|449067284|ref|YP_007434366.1|	-	2.2e-27	95.8	0.1	3e-27	95.4	0.1	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|449067284|ref|YP_007434366.1|	-	3.3e-09	36.6	0.0	8.6e-07	28.7	0.0	2.3	2	0	0	2	2	2	2	Metallo-beta-lactamase	superfamily
Lactamase_B_3	PF13483.1	gi|449067284|ref|YP_007434366.1|	-	0.028	14.1	0.0	0.1	12.3	0.0	1.8	1	1	0	1	1	1	0	Beta-lactamase	superfamily	domain
Lactamase_B_4	PF13691.1	gi|449067284|ref|YP_007434366.1|	-	0.12	11.8	0.0	0.27	10.7	0.0	1.6	1	0	0	1	1	1	0	tRNase	Z	endonuclease
RNA_binding	PF01877.12	gi|449067285|ref|YP_007434367.1|	-	1.5e-27	95.9	0.9	1.8e-27	95.7	0.6	1.0	1	0	0	1	1	1	1	RNA	binding
AAA_18	PF13238.1	gi|449067286|ref|YP_007434368.1|	-	3.4e-11	43.5	0.5	6.2e-11	42.7	0.2	1.5	1	1	1	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|449067286|ref|YP_007434368.1|	-	3.6e-06	27.8	0.2	4.6e-06	27.4	0.2	1.3	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|449067286|ref|YP_007434368.1|	-	0.00018	21.4	0.0	0.00025	20.9	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
ADK	PF00406.17	gi|449067286|ref|YP_007434368.1|	-	0.00024	21.0	0.1	0.00027	20.8	0.1	1.2	1	0	0	1	1	1	1	Adenylate	kinase
CoaE	PF01121.15	gi|449067286|ref|YP_007434368.1|	-	0.0025	17.2	0.2	0.12	11.7	0.1	2.1	1	1	1	2	2	2	2	Dephospho-CoA	kinase
LigT_PEase	PF02834.11	gi|449067287|ref|YP_007434369.1|	-	2.6e-28	97.8	0.0	8.4e-14	51.3	0.0	2.1	2	0	0	2	2	2	2	LigT	like	Phosphoesterase
2_5_RNA_ligase2	PF13563.1	gi|449067287|ref|YP_007434369.1|	-	2.8e-16	59.6	0.0	3.7e-16	59.2	0.0	1.1	1	0	0	1	1	1	1	2'-5'	RNA	ligase	superfamily
AKAP7_NLS	PF10469.4	gi|449067287|ref|YP_007434369.1|	-	1e-11	44.9	0.0	1.5e-11	44.4	0.0	1.2	1	0	0	1	1	1	1	AKAP7	2'5'	RNA	ligase-like	domain
tRNA_NucTransf2	PF09249.6	gi|449067288|ref|YP_007434370.1|	-	2.3e-43	146.6	0.0	5.2e-43	145.5	0.0	1.6	1	0	0	1	1	1	1	tRNA	nucleotidyltransferase,	second	domain
NTP_transf_2	PF01909.18	gi|449067288|ref|YP_007434370.1|	-	1.2e-11	44.7	0.2	3.9e-11	43.1	0.2	1.9	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
DNA_pol_B_palm	PF14792.1	gi|449067288|ref|YP_007434370.1|	-	0.0032	17.5	0.0	0.0081	16.1	0.0	1.7	1	0	0	1	1	1	1	DNA	polymerase	beta	palm
TrkH	PF02386.11	gi|449067288|ref|YP_007434370.1|	-	0.0053	15.3	0.0	0.0076	14.8	0.0	1.2	1	0	0	1	1	1	1	Cation	transport	protein
RIO1	PF01163.17	gi|449067289|ref|YP_007434371.1|	-	0.00021	20.6	0.0	0.00031	20.1	0.0	1.3	1	0	0	1	1	1	1	RIO1	family
Choline_kinase	PF01633.15	gi|449067289|ref|YP_007434371.1|	-	0.17	11.4	1.3	0.64	9.5	0.9	1.8	1	1	0	1	1	1	0	Choline/ethanolamine	kinase
zinc_ribbon_2	PF13240.1	gi|449067290|ref|YP_007434372.1|	-	0.00092	18.6	2.2	0.096	12.2	0.1	2.2	2	0	0	2	2	2	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|449067290|ref|YP_007434372.1|	-	0.001	18.1	4.3	0.2	10.8	0.6	2.2	2	0	0	2	2	2	2	zinc-ribbon	domain
GFA	PF04828.9	gi|449067290|ref|YP_007434372.1|	-	0.0049	16.7	0.3	0.41	10.6	0.0	2.1	1	1	1	2	2	2	1	Glutathione-dependent	formaldehyde-activating	enzyme
DZR	PF12773.2	gi|449067290|ref|YP_007434372.1|	-	0.0073	16.0	0.1	2.7	7.8	0.0	2.1	2	0	0	2	2	2	1	Double	zinc	ribbon
Zn-ribbon_8	PF09723.5	gi|449067290|ref|YP_007434372.1|	-	0.016	15.1	1.4	4.4	7.3	0.1	2.2	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-ISL3	PF14690.1	gi|449067290|ref|YP_007434372.1|	-	0.024	14.6	0.7	3.9	7.5	0.0	2.2	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-Mss51	PF13824.1	gi|449067290|ref|YP_007434372.1|	-	0.035	13.9	0.8	2.8	7.8	0.0	2.1	2	0	0	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
zf-FPG_IleRS	PF06827.9	gi|449067290|ref|YP_007434372.1|	-	0.043	13.4	3.3	0.065	12.8	0.1	2.3	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
HypA	PF01155.14	gi|449067290|ref|YP_007434372.1|	-	0.044	13.4	0.0	0.048	13.3	0.0	1.2	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
DUF35_N	PF12172.3	gi|449067290|ref|YP_007434372.1|	-	0.057	13.3	0.4	6.7	6.7	0.0	2.1	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Nudix_N_2	PF14803.1	gi|449067290|ref|YP_007434372.1|	-	0.058	13.0	3.7	4.1	7.1	0.1	2.2	2	0	0	2	2	2	0	Nudix	N-terminal
OrfB_Zn_ribbon	PF07282.6	gi|449067290|ref|YP_007434372.1|	-	0.12	12.0	0.3	10	5.8	0.0	2.1	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
ADK_lid	PF05191.9	gi|449067290|ref|YP_007434372.1|	-	0.14	11.8	1.3	13	5.4	0.1	2.2	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
UPF0547	PF10571.4	gi|449067290|ref|YP_007434372.1|	-	0.17	11.6	4.3	2.3	8.0	0.3	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zf-C2H2	PF00096.21	gi|449067290|ref|YP_007434372.1|	-	0.17	12.2	3.3	8.7	6.9	0.1	2.2	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
Auto_anti-p27	PF06677.7	gi|449067290|ref|YP_007434372.1|	-	0.18	11.5	0.8	4.8	7.0	0.2	2.2	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
TF_Zn_Ribbon	PF08271.7	gi|449067290|ref|YP_007434372.1|	-	0.23	10.7	5.4	2.3	7.6	0.1	2.4	2	1	0	2	2	2	0	TFIIB	zinc-binding
DUF2688	PF10892.3	gi|449067290|ref|YP_007434372.1|	-	0.25	11.0	1.7	0.78	9.4	0.9	2.0	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2688)
Zn_ribbon_recom	PF13408.1	gi|449067290|ref|YP_007434372.1|	-	0.25	11.6	3.6	3	8.1	2.5	2.1	1	1	0	1	1	1	0	Recombinase	zinc	beta	ribbon	domain
TFIIS_C	PF01096.13	gi|449067290|ref|YP_007434372.1|	-	0.28	10.8	4.5	2	8.1	0.1	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zf-IS66	PF13005.2	gi|449067290|ref|YP_007434372.1|	-	0.42	10.6	3.5	11	6.1	0.1	2.3	2	0	0	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
zf-HIT	PF04438.11	gi|449067290|ref|YP_007434372.1|	-	0.51	10.0	7.2	4.3	7.0	0.5	2.1	2	0	0	2	2	2	0	HIT	zinc	finger
zf-H2C2_2	PF13465.1	gi|449067290|ref|YP_007434372.1|	-	0.52	10.7	2.0	8.9	6.8	0.3	2.2	2	0	0	2	2	2	0	Zinc-finger	double	domain
DUF2082	PF09855.4	gi|449067290|ref|YP_007434372.1|	-	0.87	9.4	2.8	2.1	8.2	0.2	2.2	2	0	0	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
Rubredoxin	PF00301.15	gi|449067290|ref|YP_007434372.1|	-	0.95	9.3	5.7	1.8	8.4	0.3	2.2	2	0	0	2	2	2	0	Rubredoxin
zf-C4_Topoisom	PF01396.14	gi|449067290|ref|YP_007434372.1|	-	1.1	8.8	4.2	0.63	9.5	0.6	2.0	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
zf-NADH-PPase	PF09297.6	gi|449067290|ref|YP_007434372.1|	-	1.3	8.6	4.9	2.5	7.6	0.3	2.1	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
Zn_Tnp_IS1595	PF12760.2	gi|449067290|ref|YP_007434372.1|	-	1.4	8.7	5.6	9.4	6.1	0.7	2.1	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
DUF1610	PF07754.6	gi|449067290|ref|YP_007434372.1|	-	2.4	8.3	9.9	2.2	8.4	1.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
Sgf11	PF08209.6	gi|449067290|ref|YP_007434372.1|	-	2.4	7.5	4.6	14	5.1	0.2	2.2	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
zf-CCHC	PF00098.18	gi|449067290|ref|YP_007434372.1|	-	7.7	6.6	9.6	5.6	7.0	1.2	2.2	2	0	0	2	2	2	0	Zinc	knuckle
Kelch_1	PF01344.20	gi|449067291|ref|YP_007434373.1|	-	2.2e-25	87.9	30.0	1.1e-07	31.2	0.3	6.7	6	0	0	6	6	6	5	Kelch	motif
Kelch_6	PF13964.1	gi|449067291|ref|YP_007434373.1|	-	2.3e-19	68.6	32.2	6.5e-06	26.0	0.4	6.6	3	1	3	6	6	6	5	Kelch	motif
fn3	PF00041.16	gi|449067291|ref|YP_007434373.1|	-	5.6e-18	64.8	17.5	2.8e-10	40.1	0.5	4.1	3	1	0	3	3	3	2	Fibronectin	type	III	domain
Kelch_4	PF13418.1	gi|449067291|ref|YP_007434373.1|	-	1.7e-17	62.8	22.3	2.1e-06	27.3	0.0	6.0	5	1	1	6	6	6	4	Galactose	oxidase,	central	domain
Kelch_2	PF07646.10	gi|449067291|ref|YP_007434373.1|	-	2e-15	55.8	16.2	0.0066	16.1	0.0	6.7	6	0	0	6	6	6	6	Kelch	motif
Kelch_5	PF13854.1	gi|449067291|ref|YP_007434373.1|	-	8.7e-15	54.3	28.8	5e-05	23.1	0.3	5.8	5	0	0	5	5	5	5	Kelch	motif
Kelch_3	PF13415.1	gi|449067291|ref|YP_007434373.1|	-	1e-12	47.8	15.1	0.013	15.6	0.3	6.7	6	0	0	6	6	6	3	Galactose	oxidase,	central	domain
DUF3331	PF11811.3	gi|449067291|ref|YP_007434373.1|	-	0.15	11.6	0.2	1.3	8.6	0.0	2.5	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF3331)
adh_short_C2	PF13561.1	gi|449067292|ref|YP_007434374.1|	-	1.1e-14	54.8	0.1	1.3e-14	54.5	0.1	1.1	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|449067292|ref|YP_007434374.1|	-	1.1e-14	54.6	0.0	1.5e-14	54.2	0.0	1.2	1	0	0	1	1	1	1	short	chain	dehydrogenase
TatD_DNase	PF01026.16	gi|449067293|ref|YP_007434375.1|	-	6.3e-40	136.9	0.1	1.4e-39	135.8	0.0	1.5	1	1	0	1	1	1	1	TatD	related	DNase
Pox_C7_F8A	PF03287.9	gi|449067294|ref|YP_007434376.1|	-	0.048	13.3	3.9	0.13	11.9	1.9	1.9	1	1	1	2	2	2	0	Poxvirus	C7/F8A	protein
ABC_tran	PF00005.22	gi|449067295|ref|YP_007434377.1|	-	3.6e-28	98.5	0.0	4.8e-28	98.1	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|449067295|ref|YP_007434377.1|	-	2.5e-16	60.4	0.7	1.7e-14	54.4	0.5	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|449067295|ref|YP_007434377.1|	-	9.3e-08	31.5	0.3	3.9e-06	26.1	0.1	2.1	2	0	0	2	2	2	1	AAA	ATPase	domain
SMC_N	PF02463.14	gi|449067295|ref|YP_007434377.1|	-	6.5e-06	25.5	0.2	0.0039	16.4	0.0	2.2	1	1	1	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|449067295|ref|YP_007434377.1|	-	0.0031	16.9	0.1	0.0056	16.1	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_30	PF13604.1	gi|449067295|ref|YP_007434377.1|	-	0.0048	16.5	0.1	0.017	14.6	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|449067295|ref|YP_007434377.1|	-	0.006	16.7	0.5	0.031	14.4	0.3	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|449067295|ref|YP_007434377.1|	-	0.012	16.4	0.1	0.021	15.6	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
AAA_23	PF13476.1	gi|449067295|ref|YP_007434377.1|	-	0.013	15.8	0.2	0.028	14.7	0.1	1.4	1	1	0	1	1	1	0	AAA	domain
AAA_5	PF07728.9	gi|449067295|ref|YP_007434377.1|	-	0.033	13.9	0.2	0.14	11.8	0.1	2.0	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
SRP54	PF00448.17	gi|449067295|ref|YP_007434377.1|	-	0.034	13.5	0.0	0.13	11.7	0.1	1.8	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
AAA_18	PF13238.1	gi|449067295|ref|YP_007434377.1|	-	0.037	14.3	0.3	0.057	13.7	0.2	1.4	1	1	0	1	1	1	0	AAA	domain
DUF87	PF01935.12	gi|449067295|ref|YP_007434377.1|	-	0.052	13.3	0.2	0.29	10.9	0.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF87
MutS_V	PF00488.16	gi|449067295|ref|YP_007434377.1|	-	0.056	12.8	0.2	5.9	6.2	0.0	2.1	2	0	0	2	2	2	0	MutS	domain	V
RNA_helicase	PF00910.17	gi|449067295|ref|YP_007434377.1|	-	0.06	13.5	0.0	0.15	12.2	0.0	1.7	1	0	0	1	1	1	0	RNA	helicase
AAA_10	PF12846.2	gi|449067295|ref|YP_007434377.1|	-	0.064	12.6	0.3	0.14	11.6	0.2	1.5	1	1	0	1	1	1	0	AAA-like	domain
DUF258	PF03193.11	gi|449067295|ref|YP_007434377.1|	-	0.065	12.4	0.0	0.11	11.6	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA	PF00004.24	gi|449067295|ref|YP_007434377.1|	-	0.08	13.1	0.6	0.21	11.7	0.1	2.1	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_25	PF13481.1	gi|449067295|ref|YP_007434377.1|	-	0.12	11.7	0.0	0.16	11.3	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Lysine_decarbox	PF03641.9	gi|449067297|ref|YP_007434379.1|	-	1.5e-08	34.5	0.1	6.3e-07	29.2	0.0	2.1	2	0	0	2	2	2	2	Possible	lysine	decarboxylase
Nuc_deoxyrib_tr	PF05014.10	gi|449067297|ref|YP_007434379.1|	-	0.0009	19.1	0.0	0.0017	18.2	0.0	1.5	1	0	0	1	1	1	1	Nucleoside	2-deoxyribosyltransferase
Rib_5-P_isom_A	PF06026.9	gi|449067302|ref|YP_007434384.1|	-	8.5e-38	129.3	1.9	1.1e-37	129.0	1.3	1.1	1	0	0	1	1	1	1	Ribose	5-phosphate	isomerase	A	(phosphoriboisomerase	A)
Sugar-bind	PF04198.8	gi|449067302|ref|YP_007434384.1|	-	0.0027	16.6	0.0	0.0039	16.1	0.0	1.2	1	0	0	1	1	1	1	Putative	sugar-binding	domain
HMGL-like	PF00682.14	gi|449067304|ref|YP_007434386.1|	-	3e-66	223.4	1.8	4.3e-66	222.9	1.3	1.2	1	0	0	1	1	1	1	HMGL-like
AsnC_trans_reg	PF01037.16	gi|449067304|ref|YP_007434386.1|	-	5.5e-15	54.8	1.6	1.5e-13	50.2	0.4	3.0	3	0	0	3	3	3	1	AsnC	family
ACT_4	PF13291.1	gi|449067304|ref|YP_007434386.1|	-	2.5e-05	24.5	2.2	0.0082	16.4	0.1	4.3	4	0	0	4	4	4	1	ACT	domain
AP_endonuc_2	PF01261.19	gi|449067304|ref|YP_007434386.1|	-	0.00087	18.6	0.2	0.0027	17.0	0.1	1.9	1	1	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
NapD	PF03927.8	gi|449067304|ref|YP_007434386.1|	-	0.0085	15.8	0.4	0.062	13.1	0.3	2.5	1	0	0	1	1	1	1	NapD	protein
Glyco_hydro_97	PF10566.4	gi|449067304|ref|YP_007434386.1|	-	0.011	14.8	0.1	0.017	14.2	0.1	1.2	1	0	0	1	1	1	0	Glycoside	hydrolase	97
PdxJ	PF03740.8	gi|449067304|ref|YP_007434386.1|	-	0.03	13.4	0.4	0.082	12.0	0.2	1.8	1	1	0	1	1	1	0	Pyridoxal	phosphate	biosynthesis	protein	PdxJ
OmpA_membrane	PF01389.12	gi|449067304|ref|YP_007434386.1|	-	0.033	13.6	0.0	0.078	12.4	0.0	1.6	1	0	0	1	1	1	0	OmpA-like	transmembrane	domain
MA3	PF02847.12	gi|449067304|ref|YP_007434386.1|	-	0.09	12.4	0.0	0.35	10.5	0.0	1.9	2	0	0	2	2	2	0	MA3	domain
Spt5-NGN	PF03439.8	gi|449067304|ref|YP_007434386.1|	-	0.12	12.1	0.9	0.72	9.6	0.1	2.4	2	0	0	2	2	2	0	Early	transcription	elongation	factor	of	RNA	pol	II,	NGN	section
ExbD	PF02472.11	gi|449067304|ref|YP_007434386.1|	-	0.13	12.2	0.7	0.48	10.4	0.1	2.1	2	0	0	2	2	2	0	Biopolymer	transport	protein	ExbD/TolR
DUF2513	PF10711.4	gi|449067305|ref|YP_007434387.1|	-	0.021	14.9	0.2	0.027	14.5	0.1	1.3	1	1	0	1	1	1	0	Hypothetical	protein	(DUF2513)
IL31	PF15209.1	gi|449067305|ref|YP_007434387.1|	-	0.024	14.2	0.1	0.027	14.0	0.1	1.2	1	0	0	1	1	1	0	Interleukin	31
Sipho_Gp157	PF05565.6	gi|449067305|ref|YP_007434387.1|	-	0.047	13.2	0.7	0.056	13.0	0.5	1.1	1	0	0	1	1	1	0	Siphovirus	Gp157
AA_kinase	PF00696.23	gi|449067306|ref|YP_007434388.1|	-	6.1e-32	111.0	0.2	7.4e-32	110.8	0.1	1.1	1	0	0	1	1	1	1	Amino	acid	kinase	family
PucR	PF07905.6	gi|449067306|ref|YP_007434388.1|	-	0.086	12.4	0.0	0.24	10.9	0.0	1.7	2	0	0	2	2	2	0	Purine	catabolism	regulatory	protein-like	family
Cren7	PF11520.3	gi|449067307|ref|YP_007434389.1|	-	1.8e-28	97.9	1.9	1.9e-28	97.8	1.3	1.0	1	0	0	1	1	1	1	Chromatin	protein	Cren7
adh_short_C2	PF13561.1	gi|449067308|ref|YP_007434390.1|	-	7.6e-27	94.6	0.0	9.5e-27	94.3	0.0	1.1	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|449067308|ref|YP_007434390.1|	-	1.4e-16	60.8	0.0	1.8e-16	60.5	0.0	1.2	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|449067308|ref|YP_007434390.1|	-	1.3e-05	24.9	0.0	1.9e-05	24.4	0.0	1.2	1	0	0	1	1	1	1	KR	domain
NAD_binding_10	PF13460.1	gi|449067308|ref|YP_007434390.1|	-	8.2e-05	22.6	0.0	0.00016	21.7	0.0	1.5	1	1	0	1	1	1	1	NADH(P)-binding
Shikimate_DH	PF01488.15	gi|449067308|ref|YP_007434390.1|	-	0.043	13.9	0.0	0.074	13.1	0.0	1.3	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
THUMP	PF02926.12	gi|449067309|ref|YP_007434391.1|	-	2.3e-07	30.7	0.6	4.7e-07	29.7	0.1	1.8	2	0	0	2	2	2	1	THUMP	domain
Glyco_hydro_1	PF00232.13	gi|449067309|ref|YP_007434391.1|	-	0.069	11.3	0.0	0.11	10.7	0.0	1.2	1	0	0	1	1	1	0	Glycosyl	hydrolase	family	1
SRP54	PF00448.17	gi|449067310|ref|YP_007434392.1|	-	6e-70	234.6	0.0	9.2e-70	234.0	0.0	1.3	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SRP_SPB	PF02978.14	gi|449067310|ref|YP_007434392.1|	-	2.4e-31	108.0	1.5	1e-30	106.0	0.7	2.2	2	0	0	2	2	2	1	Signal	peptide	binding	domain
SRP54_N	PF02881.14	gi|449067310|ref|YP_007434392.1|	-	6.9e-13	48.5	0.8	6.9e-13	48.5	0.6	3.0	3	1	0	3	3	3	1	SRP54-type	protein,	helical	bundle	domain
CbiA	PF01656.18	gi|449067310|ref|YP_007434392.1|	-	5.5e-06	25.9	0.4	5e-05	22.7	0.2	2.6	2	1	0	2	2	2	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_22	PF13401.1	gi|449067310|ref|YP_007434392.1|	-	2.9e-05	24.2	0.0	0.00014	21.9	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
MobB	PF03205.9	gi|449067310|ref|YP_007434392.1|	-	0.00011	21.8	1.1	0.00025	20.7	0.3	2.0	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_10	PF12846.2	gi|449067310|ref|YP_007434392.1|	-	0.00018	21.0	0.0	0.00027	20.4	0.0	1.4	1	1	0	1	1	1	1	AAA-like	domain
cobW	PF02492.14	gi|449067310|ref|YP_007434392.1|	-	0.00027	20.4	0.0	0.00089	18.7	0.0	1.9	1	1	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_33	PF13671.1	gi|449067310|ref|YP_007434392.1|	-	0.0016	18.3	0.0	0.0043	16.9	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|449067310|ref|YP_007434392.1|	-	0.0024	18.6	0.8	0.0066	17.2	0.0	2.2	3	0	0	3	3	2	1	AAA	domain
ArgK	PF03308.11	gi|449067310|ref|YP_007434392.1|	-	0.0049	15.6	0.0	0.013	14.3	0.0	1.6	1	0	0	1	1	1	1	ArgK	protein
AAA_18	PF13238.1	gi|449067310|ref|YP_007434392.1|	-	0.0068	16.7	2.0	0.017	15.3	0.2	2.5	2	1	0	2	2	2	1	AAA	domain
Zeta_toxin	PF06414.7	gi|449067310|ref|YP_007434392.1|	-	0.014	14.5	0.0	0.034	13.2	0.0	1.7	1	0	0	1	1	1	0	Zeta	toxin
ATP_bind_1	PF03029.12	gi|449067310|ref|YP_007434392.1|	-	0.038	13.5	0.0	0.14	11.6	0.0	2.0	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
AAA_30	PF13604.1	gi|449067310|ref|YP_007434392.1|	-	0.039	13.5	0.5	0.14	11.7	0.3	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_31	PF13614.1	gi|449067310|ref|YP_007434392.1|	-	0.1	12.5	0.1	0.7	9.8	0.0	2.4	3	0	0	3	3	3	0	AAA	domain
eIF-5a	PF01287.15	gi|449067311|ref|YP_007434393.1|	-	6.9e-16	57.9	0.1	1.3e-15	57.0	0.1	1.5	1	0	0	1	1	1	1	Eukaryotic	elongation	factor	5A	hypusine,	DNA-binding	OB	fold
EFP_N	PF08207.7	gi|449067311|ref|YP_007434393.1|	-	3.4e-07	30.0	0.0	1e-06	28.4	0.0	1.8	2	0	0	2	2	2	1	Elongation	factor	P	(EF-P)	KOW-like	domain
KOW	PF00467.24	gi|449067311|ref|YP_007434393.1|	-	0.00028	20.4	0.4	0.00076	19.1	0.3	1.8	1	0	0	1	1	1	1	KOW	motif
EFP	PF01132.15	gi|449067311|ref|YP_007434393.1|	-	0.012	15.2	0.0	0.026	14.1	0.0	1.5	1	0	0	1	1	1	0	Elongation	factor	P	(EF-P)	OB	domain
MacB_PCD	PF12704.2	gi|449067311|ref|YP_007434393.1|	-	0.05	13.1	0.0	0.14	11.7	0.0	1.7	1	1	0	1	1	1	0	MacB-like	periplasmic	core	domain
TP6A_N	PF04406.9	gi|449067312|ref|YP_007434394.1|	-	6.6e-24	83.3	0.1	1.1e-23	82.6	0.1	1.4	1	0	0	1	1	1	1	Type	IIB	DNA	topoisomerase
DUF2399	PF09664.5	gi|449067312|ref|YP_007434394.1|	-	0.031	14.1	0.0	0.069	13.0	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	C-terminus	(DUF2399)
HAD_2	PF13419.1	gi|449067312|ref|YP_007434394.1|	-	0.053	13.7	0.0	0.1	12.8	0.0	1.4	1	0	0	1	1	1	0	Haloacid	dehalogenase-like	hydrolase
ROK	PF00480.15	gi|449067312|ref|YP_007434394.1|	-	0.19	11.5	0.0	1.4	8.7	0.0	2.1	2	0	0	2	2	2	0	ROK	family
Topo-VIb_trans	PF09239.6	gi|449067313|ref|YP_007434395.1|	-	1.3e-65	219.8	0.4	2.5e-65	218.8	0.3	1.5	1	0	0	1	1	1	1	Topoisomerase	VI	B	subunit,	transducer
HATPase_c_3	PF13589.1	gi|449067313|ref|YP_007434395.1|	-	2.7e-12	46.5	0.0	6.9e-12	45.1	0.0	1.7	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c	PF02518.21	gi|449067313|ref|YP_007434395.1|	-	1.7e-11	43.8	0.0	3.3e-11	42.8	0.0	1.5	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
FbpA	PF05833.6	gi|449067313|ref|YP_007434395.1|	-	2.1e-05	23.2	0.0	2.1e-05	23.2	0.0	2.1	2	0	0	2	2	2	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
Ribosomal_S13	PF00416.17	gi|449067313|ref|YP_007434395.1|	-	0.0031	17.9	0.2	0.013	15.9	0.0	2.1	2	0	0	2	2	2	1	Ribosomal	protein	S13/S18
Spore_III_AB	PF09548.5	gi|449067313|ref|YP_007434395.1|	-	7.2	6.3	10.4	1.1	9.0	1.4	2.8	3	0	0	3	3	3	0	Stage	III	sporulation	protein	AB	(spore_III_AB)
DS	PF01916.12	gi|449067314|ref|YP_007434396.1|	-	2.6e-83	279.6	0.1	3.1e-83	279.3	0.0	1.0	1	0	0	1	1	1	1	Deoxyhypusine	synthase
RtcB	PF01139.12	gi|449067315|ref|YP_007434397.1|	-	3.3e-150	500.7	0.4	3.7e-150	500.5	0.3	1.0	1	0	0	1	1	1	1	tRNA-splicing	ligase	RtcB
YHS	PF04945.8	gi|449067316|ref|YP_007434398.1|	-	0.0041	16.9	0.1	0.008	15.9	0.1	1.6	1	0	0	1	1	1	1	YHS	domain
HsbA	PF12296.3	gi|449067316|ref|YP_007434398.1|	-	0.014	15.2	0.4	0.017	14.9	0.3	1.1	1	0	0	1	1	1	0	Hydrophobic	surface	binding	protein	A
YjcQ	PF09639.5	gi|449067316|ref|YP_007434398.1|	-	0.015	15.4	0.9	0.11	12.5	0.1	2.0	1	1	1	2	2	2	0	YjcQ	protein
PUB	PF09409.5	gi|449067316|ref|YP_007434398.1|	-	0.02	14.6	0.2	0.027	14.2	0.1	1.2	1	0	0	1	1	1	0	PUB	domain
Sec23_helical	PF04815.10	gi|449067316|ref|YP_007434398.1|	-	0.063	12.7	0.2	0.075	12.4	0.2	1.1	1	0	0	1	1	1	0	Sec23/Sec24	helical	domain
Peptidase_S21	PF00716.12	gi|449067316|ref|YP_007434398.1|	-	0.1	11.9	0.1	0.11	11.7	0.1	1.1	1	0	0	1	1	1	0	Assemblin	(Peptidase	family	S21)
YonK	PF09642.5	gi|449067316|ref|YP_007434398.1|	-	0.28	10.9	2.5	1.1	9.0	1.0	2.0	1	1	1	2	2	2	0	YonK	protein
DEAD	PF00270.24	gi|449067317|ref|YP_007434399.1|	-	8e-30	103.5	0.0	2.7e-29	101.8	0.0	1.9	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
DEAD_assoc	PF08494.6	gi|449067317|ref|YP_007434399.1|	-	2.9e-23	82.5	0.1	3e-22	79.2	0.0	2.5	2	1	0	2	2	2	1	DEAD/H	associated
Helicase_C	PF00271.26	gi|449067317|ref|YP_007434399.1|	-	3e-14	52.6	0.0	1.6e-13	50.3	0.0	2.1	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|449067317|ref|YP_007434399.1|	-	5.8e-06	26.2	0.0	2.5e-05	24.1	0.0	2.0	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
HTH_24	PF13412.1	gi|449067317|ref|YP_007434399.1|	-	0.0019	17.5	0.5	0.007	15.7	0.0	2.2	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
SNF2_N	PF00176.18	gi|449067317|ref|YP_007434399.1|	-	0.0047	15.7	0.0	0.0084	14.9	0.0	1.3	1	0	0	1	1	1	1	SNF2	family	N-terminal	domain
HTH_5	PF01022.15	gi|449067317|ref|YP_007434399.1|	-	0.0085	15.7	0.0	0.031	13.9	0.0	2.0	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_AsnC-type	PF13404.1	gi|449067317|ref|YP_007434399.1|	-	0.021	14.3	0.0	0.055	13.0	0.0	1.7	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
HTH_20	PF12840.2	gi|449067317|ref|YP_007434399.1|	-	0.052	13.3	0.0	0.14	11.9	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_28	PF13518.1	gi|449067317|ref|YP_007434399.1|	-	0.076	13.0	0.0	0.24	11.4	0.0	1.9	1	0	0	1	1	1	0	Helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|449067317|ref|YP_007434399.1|	-	0.086	12.7	0.1	8	6.4	0.1	2.6	2	0	0	2	2	2	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Alba	PF01918.16	gi|449067318|ref|YP_007434400.1|	-	1.7e-11	43.5	0.3	2.2e-11	43.1	0.2	1.2	1	0	0	1	1	1	1	Alba
Topoisom_bac	PF01131.15	gi|449067319|ref|YP_007434401.1|	-	3.2e-82	276.5	0.3	4.9e-82	275.9	0.2	1.3	1	0	0	1	1	1	1	DNA	topoisomerase
Toprim	PF01751.17	gi|449067319|ref|YP_007434401.1|	-	4.7e-20	71.4	0.0	1.8e-19	69.5	0.0	2.1	1	0	0	1	1	1	1	Toprim	domain
DEAD	PF00270.24	gi|449067319|ref|YP_007434401.1|	-	3.3e-09	36.4	0.5	1.7e-08	34.1	0.3	2.3	1	1	0	1	1	1	1	DEAD/DEAH	box	helicase
ResIII	PF04851.10	gi|449067319|ref|YP_007434401.1|	-	8.5e-07	28.9	0.0	2.3e-06	27.5	0.0	1.7	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
Toprim_4	PF13662.1	gi|449067319|ref|YP_007434401.1|	-	0.00012	22.0	0.0	0.00033	20.6	0.0	1.8	1	0	0	1	1	1	1	Toprim	domain
zinc_ribbon_2	PF13240.1	gi|449067319|ref|YP_007434401.1|	-	0.00037	19.8	0.7	0.00037	19.8	0.5	2.3	2	0	0	2	2	2	1	zinc-ribbon	domain
HTH_27	PF13463.1	gi|449067319|ref|YP_007434401.1|	-	0.0065	16.7	0.0	1.6	9.0	0.0	3.8	3	0	0	3	3	3	1	Winged	helix	DNA-binding	domain
zf-ribbon_3	PF13248.1	gi|449067319|ref|YP_007434401.1|	-	0.0088	15.2	4.6	0.011	14.9	0.4	2.3	2	0	0	2	2	2	1	zinc-ribbon	domain
zf-C2HC5	PF06221.8	gi|449067319|ref|YP_007434401.1|	-	0.012	15.3	1.3	0.028	14.1	0.9	1.5	1	0	0	1	1	1	0	Putative	zinc	finger	motif,	C2HC5-type
DZR	PF12773.2	gi|449067319|ref|YP_007434401.1|	-	0.016	14.9	0.4	0.016	14.9	0.3	2.1	2	0	0	2	2	2	0	Double	zinc	ribbon
AAA_19	PF13245.1	gi|449067319|ref|YP_007434401.1|	-	0.07	12.8	0.0	0.39	10.4	0.0	2.2	2	0	0	2	2	2	0	Part	of	AAA	domain
zf-C3HC4_3	PF13920.1	gi|449067319|ref|YP_007434401.1|	-	2.2	8.0	6.3	0.33	10.6	1.0	2.1	3	0	0	3	3	3	0	Zinc	finger,	C3HC4	type	(RING	finger)
Sgf11	PF08209.6	gi|449067319|ref|YP_007434401.1|	-	7.8	5.9	6.5	9.8	5.5	0.1	3.0	2	1	1	3	3	3	0	Sgf11	(transcriptional	regulation	protein)
Alba	PF01918.16	gi|449067320|ref|YP_007434402.1|	-	1.3e-19	69.4	0.5	1.8e-19	69.1	0.4	1.2	1	0	0	1	1	1	1	Alba
Latrotoxin_C	PF15658.1	gi|449067322|ref|YP_007434404.1|	-	0.03	14.1	0.5	0.037	13.8	0.4	1.2	1	0	0	1	1	1	0	Latrotoxin	C-terminal	domain
ResIII	PF04851.10	gi|449067324|ref|YP_007434406.1|	-	1.4e-22	80.4	2.2	1.7e-22	80.1	0.1	2.2	2	2	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.26	gi|449067324|ref|YP_007434406.1|	-	1.4e-16	60.0	0.1	3.5e-16	58.8	0.1	1.7	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
DEAD	PF00270.24	gi|449067324|ref|YP_007434406.1|	-	3.6e-13	49.3	0.9	5.2e-12	45.5	0.0	2.8	2	1	1	3	3	3	1	DEAD/DEAH	box	helicase
SNF2_N	PF00176.18	gi|449067324|ref|YP_007434406.1|	-	7e-09	34.8	0.3	4.9e-08	32.1	0.2	2.1	1	1	0	1	1	1	1	SNF2	family	N-terminal	domain
Helicase_RecD	PF05127.9	gi|449067324|ref|YP_007434406.1|	-	0.00062	19.4	0.0	0.0014	18.3	0.0	1.6	1	0	0	1	1	1	1	Helicase
DUF2075	PF09848.4	gi|449067324|ref|YP_007434406.1|	-	0.00097	18.2	0.0	0.0022	17.0	0.0	1.5	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_22	PF13401.1	gi|449067324|ref|YP_007434406.1|	-	0.0011	19.1	1.6	0.013	15.6	0.3	3.2	2	2	0	2	2	2	1	AAA	domain
IstB_IS21	PF01695.12	gi|449067324|ref|YP_007434406.1|	-	0.0041	16.5	0.1	0.47	9.8	0.0	2.4	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
AAA_30	PF13604.1	gi|449067324|ref|YP_007434406.1|	-	0.011	15.3	0.0	0.037	13.6	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_11	PF13086.1	gi|449067324|ref|YP_007434406.1|	-	0.12	11.8	2.1	1.8	8.0	0.0	2.7	2	1	1	3	3	3	0	AAA	domain
CutA1	PF03091.10	gi|449067326|ref|YP_007434408.1|	-	3.4e-36	122.9	1.3	3.9e-36	122.7	0.9	1.0	1	0	0	1	1	1	1	CutA1	divalent	ion	tolerance	protein
HisK_N	PF09385.5	gi|449067326|ref|YP_007434408.1|	-	0.059	12.9	0.7	0.13	11.8	0.5	1.6	1	1	0	1	1	1	0	Histidine	kinase	N	terminal
Glu-tRNAGln	PF02686.10	gi|449067327|ref|YP_007434409.1|	-	1.4e-19	69.6	0.1	1.7e-19	69.4	0.1	1.1	1	0	0	1	1	1	1	Glu-tRNAGln	amidotransferase	C	subunit
AF0941-like	PF14591.1	gi|449067327|ref|YP_007434409.1|	-	0.0074	16.3	1.2	0.0096	15.9	0.8	1.2	1	0	0	1	1	1	1	AF0941-like
PhnI	PF05861.7	gi|449067327|ref|YP_007434409.1|	-	0.051	12.0	0.0	0.06	11.8	0.0	1.0	1	0	0	1	1	1	0	Bacterial	phosphonate	metabolism	protein	(PhnI)
Amidase	PF01425.16	gi|449067328|ref|YP_007434410.1|	-	3e-134	448.2	0.0	3.4e-134	448.0	0.0	1.0	1	0	0	1	1	1	1	Amidase
Wyosine_form	PF08608.7	gi|449067329|ref|YP_007434411.1|	-	1.3e-22	79.5	0.0	3.1e-22	78.4	0.0	1.7	1	0	0	1	1	1	1	Wyosine	base	formation
Radical_SAM	PF04055.16	gi|449067329|ref|YP_007434411.1|	-	3.5e-20	72.8	0.0	8.3e-20	71.6	0.0	1.6	1	1	0	1	1	1	1	Radical	SAM	superfamily
CTP-dep_RFKase	PF01982.11	gi|449067330|ref|YP_007434412.1|	-	1.4e-42	144.1	0.0	1.7e-42	143.8	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF120
Antitoxin-MazE	PF04014.13	gi|449067330|ref|YP_007434412.1|	-	0.053	13.2	0.2	0.053	13.2	0.1	1.9	2	0	0	2	2	2	0	Antidote-toxin	recognition	MazE
DUF357	PF04010.8	gi|449067331|ref|YP_007434413.1|	-	6e-21	73.9	2.3	6.8e-21	73.7	0.7	1.7	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF357)
CTP_transf_2	PF01467.21	gi|449067331|ref|YP_007434413.1|	-	3.3e-10	40.2	0.1	7.6e-10	39.0	0.1	1.7	1	1	0	1	1	1	1	Cytidylyltransferase
ERp29	PF07749.7	gi|449067331|ref|YP_007434413.1|	-	0.0097	16.5	3.4	2.6	8.7	0.3	2.5	2	0	0	2	2	2	2	Endoplasmic	reticulum	protein	ERp29,	C-terminal	domain
Urm1	PF09138.6	gi|449067331|ref|YP_007434413.1|	-	0.056	13.5	1.0	0.11	12.5	0.1	1.9	2	1	0	2	2	2	0	Urm1	(Ubiquitin	related	modifier)
FAD_syn	PF06574.7	gi|449067331|ref|YP_007434413.1|	-	0.084	12.4	0.1	0.42	10.2	0.0	2.1	1	1	0	1	1	1	0	FAD	synthetase
TP_methylase	PF00590.15	gi|449067332|ref|YP_007434414.1|	-	1.2e-22	80.7	0.0	1.4e-22	80.4	0.0	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
Metallophos_2	PF12850.2	gi|449067333|ref|YP_007434415.1|	-	1.3e-06	28.2	0.6	2.3e-06	27.5	0.4	1.5	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|449067333|ref|YP_007434415.1|	-	6.3e-06	25.7	1.4	4e-05	23.1	0.9	1.9	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
Ribosomal_L4	PF00573.17	gi|449067333|ref|YP_007434415.1|	-	0.01	15.2	0.9	0.015	14.6	0.6	1.2	1	0	0	1	1	1	0	Ribosomal	protein	L4/L1	family
TBP	PF00352.16	gi|449067334|ref|YP_007434416.1|	-	2.1e-62	206.4	0.2	3.1e-34	116.1	0.0	2.0	2	0	0	2	2	2	2	Transcription	factor	TFIID	(or	TATA-binding	protein,	TBP)
DUF3378	PF11858.3	gi|449067334|ref|YP_007434416.1|	-	0.00011	22.1	0.0	0.46	10.5	0.0	2.5	1	1	2	3	3	3	2	Domain	of	unknown	function	(DUF3378)
HMA	PF00403.21	gi|449067334|ref|YP_007434416.1|	-	0.056	13.6	1.2	1.7	8.8	0.1	2.5	2	0	0	2	2	2	0	Heavy-metal-associated	domain
DRTGG	PF07085.7	gi|449067334|ref|YP_007434416.1|	-	0.13	11.8	0.1	2.2	7.9	0.0	2.2	1	1	1	2	2	2	0	DRTGG	domain
DUF373	PF04123.8	gi|449067336|ref|YP_007434418.1|	-	7.4e-103	344.1	24.6	8.7e-103	343.9	17.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF373)
Reo_sigmaC	PF04582.7	gi|449067337|ref|YP_007434419.1|	-	1.1e-05	24.8	10.8	0.0014	17.8	3.2	2.2	1	1	1	2	2	2	2	Reovirus	sigma	C	capsid	protein
IncA	PF04156.9	gi|449067337|ref|YP_007434419.1|	-	0.00037	20.1	59.6	0.0032	17.0	17.7	3.0	1	1	2	3	3	3	2	IncA	protein
HlyE	PF06109.8	gi|449067337|ref|YP_007434419.1|	-	0.0012	17.8	11.9	0.012	14.6	0.8	2.5	2	1	0	2	2	2	2	Haemolysin	E	(HlyE)
Fib_alpha	PF08702.5	gi|449067337|ref|YP_007434419.1|	-	0.0019	18.2	9.5	0.0019	18.2	6.6	3.5	1	1	2	3	3	3	1	Fibrinogen	alpha/beta	chain	family
CENP-F_leu_zip	PF10473.4	gi|449067337|ref|YP_007434419.1|	-	0.006	16.4	27.9	0.006	16.4	19.3	3.7	2	1	2	4	4	4	1	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Baculo_PEP_C	PF04513.7	gi|449067337|ref|YP_007434419.1|	-	0.016	15.0	22.0	0.52	10.1	1.9	3.4	1	1	2	3	3	3	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Spc7	PF08317.6	gi|449067337|ref|YP_007434419.1|	-	0.033	12.8	67.6	0.013	14.2	16.8	3.2	1	1	2	3	3	3	0	Spc7	kinetochore	protein
AAA_27	PF13514.1	gi|449067337|ref|YP_007434419.1|	-	0.26	8.9	44.0	0.2	9.2	20.3	2.1	1	1	1	2	2	2	0	AAA	domain
COG5	PF10392.4	gi|449067337|ref|YP_007434419.1|	-	0.26	11.2	30.1	0.067	13.1	6.4	3.4	1	1	2	3	3	3	0	Golgi	transport	complex	subunit	5
AAA_13	PF13166.1	gi|449067337|ref|YP_007434419.1|	-	0.32	9.3	55.5	0.69	8.3	11.3	2.1	1	1	1	2	2	2	0	AAA	domain
MCPsignal	PF00015.16	gi|449067337|ref|YP_007434419.1|	-	0.62	9.5	23.3	3.1	7.2	7.0	2.8	1	1	1	2	2	2	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
DASH_Dam1	PF08653.5	gi|449067337|ref|YP_007434419.1|	-	0.71	9.6	4.6	8.5	6.2	0.1	3.7	2	2	0	2	2	2	0	DASH	complex	subunit	Dam1
NPV_P10	PF05531.7	gi|449067337|ref|YP_007434419.1|	-	0.96	9.7	30.4	0.37	11.0	3.8	5.0	1	1	3	4	4	4	0	Nucleopolyhedrovirus	P10	protein
WEMBL	PF05701.6	gi|449067337|ref|YP_007434419.1|	-	1	7.7	57.4	6.9	5.0	39.7	1.9	1	1	0	1	1	1	0	Weak	chloroplast	movement	under	blue	light
Syntaxin-6_N	PF09177.6	gi|449067337|ref|YP_007434419.1|	-	1.8	9.0	36.9	0.48	10.8	5.4	4.5	1	1	4	5	5	5	0	Syntaxin	6,	N-terminal
Seryl_tRNA_N	PF02403.17	gi|449067337|ref|YP_007434419.1|	-	1.9	8.5	66.7	0.39	10.7	7.2	5.1	1	1	4	5	5	5	0	Seryl-tRNA	synthetase	N-terminal	domain
RTBV_P46	PF06216.6	gi|449067337|ref|YP_007434419.1|	-	2.8	6.6	26.1	0.89	8.3	4.9	3.1	2	1	1	3	3	3	0	Rice	tungro	bacilliform	virus	P46	protein
DUF812	PF05667.6	gi|449067337|ref|YP_007434419.1|	-	2.9	6.2	53.4	0.14	10.6	11.0	2.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF812)
TBPIP	PF07106.8	gi|449067337|ref|YP_007434419.1|	-	3.4	7.1	61.7	1.4	8.4	10.7	4.2	1	1	1	3	3	3	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
APG6	PF04111.7	gi|449067337|ref|YP_007434419.1|	-	3.7	6.5	58.9	0.043	12.8	13.0	3.1	1	1	2	3	3	3	0	Autophagy	protein	Apg6
Atg14	PF10186.4	gi|449067337|ref|YP_007434419.1|	-	3.7	6.4	64.2	0.98	8.2	16.2	3.4	1	1	3	4	4	4	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
ATG16	PF08614.6	gi|449067337|ref|YP_007434419.1|	-	4.3	7.1	61.8	0.18	11.6	14.3	3.3	1	1	2	3	3	3	0	Autophagy	protein	16	(ATG16)
Tup_N	PF08581.5	gi|449067337|ref|YP_007434419.1|	-	4.4	7.5	46.8	5	7.3	5.6	5.4	1	1	4	5	5	5	0	Tup	N-terminal
IFT57	PF10498.4	gi|449067337|ref|YP_007434419.1|	-	6.3	5.4	53.9	0.13	10.9	12.3	2.7	1	1	1	2	2	2	0	Intra-flagellar	transport	protein	57
MscS_porin	PF12795.2	gi|449067337|ref|YP_007434419.1|	-	7.6	5.7	55.1	0.13	11.5	28.3	2.6	1	1	1	2	2	2	0	Mechanosensitive	ion	channel	porin	domain
DUF1320	PF07030.7	gi|449067337|ref|YP_007434419.1|	-	9	6.0	11.6	0.079	12.7	0.4	3.1	3	3	0	3	3	3	0	Protein	of	unknown	function	(DUF1320)
Gar1	PF04410.9	gi|449067338|ref|YP_007434420.1|	-	0.017	14.6	0.0	0.019	14.4	0.0	1.2	1	0	0	1	1	1	0	Gar1/Naf1	RNA	binding	region
TFIIB	PF00382.14	gi|449067339|ref|YP_007434421.1|	-	2.2e-24	85.0	0.3	8.5e-15	54.3	0.0	2.4	2	0	0	2	2	2	2	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.7	gi|449067339|ref|YP_007434421.1|	-	1.2e-14	53.3	0.7	1.9e-14	52.6	0.5	1.4	1	0	0	1	1	1	1	TFIIB	zinc-binding
A2L_zn_ribbon	PF08792.5	gi|449067339|ref|YP_007434421.1|	-	0.00039	19.7	1.7	0.00086	18.6	1.2	1.6	1	0	0	1	1	1	1	A2L	zinc	ribbon	domain
Sigma70_r4	PF04545.11	gi|449067339|ref|YP_007434421.1|	-	0.0016	17.7	1.0	0.0031	16.8	0.1	2.0	2	0	0	2	2	2	1	Sigma-70,	region	4
Ribosomal_S27e	PF01667.12	gi|449067339|ref|YP_007434421.1|	-	0.0044	16.5	0.2	0.0084	15.6	0.1	1.5	1	0	0	1	1	1	1	Ribosomal	protein	S27
Sigma70_r4_2	PF08281.7	gi|449067339|ref|YP_007434421.1|	-	0.012	15.0	0.2	0.038	13.4	0.1	1.8	1	0	0	1	1	1	0	Sigma-70,	region	4
MA3	PF02847.12	gi|449067339|ref|YP_007434421.1|	-	0.014	15.0	0.2	0.063	12.9	0.1	2.2	1	1	0	1	1	1	0	MA3	domain
GerE	PF00196.14	gi|449067339|ref|YP_007434421.1|	-	0.029	13.6	3.1	0.04	13.2	0.1	2.4	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
DUF948	PF06103.6	gi|449067339|ref|YP_007434421.1|	-	0.047	13.5	1.2	3.1	7.7	0.1	2.6	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
HTH_11	PF08279.7	gi|449067339|ref|YP_007434421.1|	-	0.053	13.1	0.2	0.16	11.6	0.2	1.8	1	0	0	1	1	1	0	HTH	domain
Terminase_5	PF06056.7	gi|449067339|ref|YP_007434421.1|	-	0.1	12.1	1.5	4	7.0	0.0	2.9	3	0	0	3	3	3	0	Putative	ATPase	subunit	of	terminase	(gpP-like)
TRM	PF02005.11	gi|449067341|ref|YP_007434423.1|	-	4.4e-86	289.1	0.6	4.9e-86	289.0	0.4	1.0	1	0	0	1	1	1	1	N2,N2-dimethylguanosine	tRNA	methyltransferase
Met_10	PF02475.11	gi|449067341|ref|YP_007434423.1|	-	0.0013	18.3	0.1	0.0019	17.8	0.1	1.4	1	0	0	1	1	1	1	Met-10+	like-protein
MTS	PF05175.9	gi|449067341|ref|YP_007434423.1|	-	0.002	17.5	0.4	0.0057	16.0	0.1	1.7	1	1	1	2	2	2	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.1	gi|449067341|ref|YP_007434423.1|	-	0.0046	16.5	0.0	0.0074	15.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
OrfB_Zn_ribbon	PF07282.6	gi|449067341|ref|YP_007434423.1|	-	0.007	16.0	0.5	0.015	14.9	0.4	1.6	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Methyltransf_16	PF10294.4	gi|449067341|ref|YP_007434423.1|	-	0.011	15.1	0.0	0.023	14.1	0.0	1.4	1	0	0	1	1	1	0	Putative	methyltransferase
DNA_methylase	PF00145.12	gi|449067341|ref|YP_007434423.1|	-	0.045	12.8	0.0	0.089	11.8	0.0	1.4	1	0	0	1	1	1	0	C-5	cytosine-specific	DNA	methylase
C1_1	PF00130.17	gi|449067341|ref|YP_007434423.1|	-	0.093	12.4	1.7	0.19	11.4	1.2	1.4	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
zinc-ribbons_6	PF07191.7	gi|449067341|ref|YP_007434423.1|	-	0.11	12.3	1.0	0.25	11.1	0.7	1.6	1	0	0	1	1	1	0	zinc-ribbons
zf-ribbon_3	PF13248.1	gi|449067341|ref|YP_007434423.1|	-	0.16	11.2	2.4	0.48	9.6	1.6	1.8	1	1	0	1	1	1	0	zinc-ribbon	domain
PrmA	PF06325.8	gi|449067341|ref|YP_007434423.1|	-	0.17	10.9	0.3	0.24	10.5	0.2	1.2	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
zinc_ribbon_2	PF13240.1	gi|449067341|ref|YP_007434423.1|	-	0.74	9.3	4.4	2.6	7.6	3.0	1.9	1	1	0	1	1	1	0	zinc-ribbon	domain
FAR1	PF03101.10	gi|449067341|ref|YP_007434423.1|	-	3.2	8.3	5.3	1.7	9.2	2.0	1.8	2	0	0	2	2	2	0	FAR1	DNA-binding	domain
HTH_3	PF01381.17	gi|449067342|ref|YP_007434424.1|	-	3.2e-10	39.6	0.1	7.8e-10	38.4	0.1	1.7	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.2	gi|449067342|ref|YP_007434424.1|	-	1.5e-08	34.5	0.3	5.2e-08	32.8	0.2	1.9	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_31	PF13560.1	gi|449067342|ref|YP_007434424.1|	-	6.7e-05	23.0	0.0	0.0001	22.3	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_26	PF13443.1	gi|449067342|ref|YP_007434424.1|	-	0.0012	19.0	0.0	0.0032	17.6	0.0	1.8	1	0	0	1	1	1	1	Cro/C1-type	HTH	DNA-binding	domain
HTH_11	PF08279.7	gi|449067342|ref|YP_007434424.1|	-	0.0093	15.6	0.0	0.038	13.6	0.0	2.1	1	0	0	1	1	1	1	HTH	domain
HTH_25	PF13413.1	gi|449067342|ref|YP_007434424.1|	-	0.022	14.3	0.1	0.043	13.4	0.1	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
DUF61	PF01886.11	gi|449067343|ref|YP_007434425.1|	-	2.3e-20	72.7	0.3	2.7e-20	72.5	0.2	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF61
Fibrillarin	PF01269.12	gi|449067344|ref|YP_007434426.1|	-	2.6e-97	324.2	0.1	3.1e-97	324.0	0.1	1.0	1	0	0	1	1	1	1	Fibrillarin
GCD14	PF08704.5	gi|449067344|ref|YP_007434426.1|	-	0.024	14.1	0.0	0.088	12.2	0.0	1.8	1	1	0	1	1	1	0	tRNA	methyltransferase	complex	GCD14	subunit
Methyltransf_24	PF13578.1	gi|449067344|ref|YP_007434426.1|	-	0.027	15.3	0.0	0.047	14.5	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
PCMT	PF01135.14	gi|449067344|ref|YP_007434426.1|	-	0.037	13.5	0.0	0.068	12.7	0.0	1.4	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
DUF3986	PF13143.1	gi|449067344|ref|YP_007434426.1|	-	0.057	13.8	0.1	0.14	12.6	0.1	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3986)
Nop	PF01798.13	gi|449067345|ref|YP_007434427.1|	-	2.4e-54	182.7	0.0	6e-54	181.4	0.0	1.6	1	0	0	1	1	1	1	Putative	snoRNA	binding	domain
NOSIC	PF08060.8	gi|449067345|ref|YP_007434427.1|	-	9.8e-24	82.9	0.3	9.8e-24	82.9	0.2	1.9	2	0	0	2	2	2	1	NOSIC	(NUC001)	domain
Mt_ATP-synt_B	PF05405.9	gi|449067345|ref|YP_007434427.1|	-	0.095	12.1	1.6	0.13	11.7	0.3	1.8	2	0	0	2	2	2	0	Mitochondrial	ATP	synthase	B	chain	precursor	(ATP-synt_B)
Peptidase_S49_N	PF08496.5	gi|449067345|ref|YP_007434427.1|	-	0.42	10.4	5.3	0.68	9.7	3.7	1.4	1	0	0	1	1	1	0	Peptidase	family	S49	N-terminal
Ribosomal_S30	PF04758.9	gi|449067346|ref|YP_007434428.1|	-	5.5e-14	51.6	3.7	6.7e-14	51.3	2.6	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S30
Sas10	PF09368.5	gi|449067346|ref|YP_007434428.1|	-	0.041	14.0	6.2	0.089	12.9	4.2	1.6	1	1	1	2	2	2	0	Sas10	C-terminal	domain
Asparaginase	PF00710.15	gi|449067347|ref|YP_007434429.1|	-	5.4e-93	311.2	0.0	6.7e-93	310.9	0.0	1.1	1	0	0	1	1	1	1	Asparaginase
GatB_N	PF02934.10	gi|449067348|ref|YP_007434430.1|	-	2.3e-80	269.5	0.2	3.5e-80	268.9	0.1	1.2	1	0	0	1	1	1	1	GatB/GatE	catalytic	domain
GatB_Yqey	PF02637.13	gi|449067348|ref|YP_007434430.1|	-	2.6e-21	75.8	5.7	2.6e-21	75.8	3.9	2.3	2	0	0	2	2	2	1	GatB	domain
GAD	PF02938.9	gi|449067348|ref|YP_007434430.1|	-	2.3e-12	46.8	0.1	2.3e-12	46.8	0.1	3.2	3	1	0	3	3	3	1	GAD	domain
YqeY	PF09424.5	gi|449067348|ref|YP_007434430.1|	-	0.0046	16.8	0.7	0.011	15.5	0.5	1.7	1	0	0	1	1	1	1	Yqey-like	protein
HTH_3	PF01381.17	gi|449067350|ref|YP_007434432.1|	-	0.013	15.2	0.5	0.022	14.6	0.3	1.3	1	0	0	1	1	1	0	Helix-turn-helix
HTH_23	PF13384.1	gi|449067350|ref|YP_007434432.1|	-	0.017	14.7	0.1	0.028	14.0	0.1	1.4	1	0	0	1	1	1	0	Homeodomain-like	domain
Tn7_Tnp_TnsA_C	PF08721.6	gi|449067350|ref|YP_007434432.1|	-	0.081	12.9	0.1	3.5	7.7	0.0	2.2	2	0	0	2	2	2	0	TnsA	endonuclease	C	terminal
FliT	PF05400.8	gi|449067350|ref|YP_007434432.1|	-	0.096	13.1	0.0	0.14	12.5	0.0	1.2	1	0	0	1	1	1	0	Flagellar	protein	FliT
Cro	PF09048.5	gi|449067350|ref|YP_007434432.1|	-	0.14	11.8	0.1	0.79	9.4	0.0	2.1	1	1	1	2	2	2	0	Cro
Ribonuc_red_lgC	PF02867.10	gi|449067351|ref|YP_007434433.1|	-	6.7e-171	569.4	0.0	9e-171	569.0	0.0	1.2	1	0	0	1	1	1	1	Ribonucleotide	reductase,	barrel	domain
Ribonuc_red_lgN	PF00317.16	gi|449067351|ref|YP_007434433.1|	-	9.6e-29	99.0	0.2	2.3e-28	97.8	0.1	1.7	1	0	0	1	1	1	1	Ribonucleotide	reductase,	all-alpha	domain
ATP-cone	PF03477.11	gi|449067351|ref|YP_007434433.1|	-	6.4e-08	32.9	0.3	3.6e-07	30.5	0.0	2.4	2	0	0	2	2	2	1	ATP	cone	domain
PGK	PF00162.14	gi|449067353|ref|YP_007434435.1|	-	6.4e-111	370.6	0.2	7.3e-111	370.4	0.1	1.0	1	0	0	1	1	1	1	Phosphoglycerate	kinase
Gp_dh_N	PF00044.19	gi|449067354|ref|YP_007434436.1|	-	1.3e-21	77.1	1.5	1.2e-20	73.9	0.6	2.3	2	0	0	2	2	2	1	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
Gp_dh_C	PF02800.15	gi|449067354|ref|YP_007434436.1|	-	3.5e-15	55.7	0.2	5e-15	55.2	0.1	1.2	1	0	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
DapB_N	PF01113.15	gi|449067354|ref|YP_007434436.1|	-	1.2e-12	47.8	0.2	3e-12	46.5	0.1	1.7	1	1	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
Semialdhyde_dh	PF01118.19	gi|449067354|ref|YP_007434436.1|	-	0.00012	22.3	0.0	0.00032	20.9	0.0	1.7	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
GFO_IDH_MocA	PF01408.17	gi|449067354|ref|YP_007434436.1|	-	0.00056	20.4	0.0	0.0018	18.7	0.0	1.9	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
2-Hacid_dh_C	PF02826.14	gi|449067354|ref|YP_007434436.1|	-	0.00082	18.5	0.1	0.034	13.2	0.1	2.5	1	1	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_3	PF03447.11	gi|449067354|ref|YP_007434436.1|	-	0.0056	17.0	0.0	0.019	15.3	0.0	1.9	1	1	0	1	1	1	1	Homoserine	dehydrogenase,	NAD	binding	domain
IlvN	PF07991.7	gi|449067354|ref|YP_007434436.1|	-	0.035	13.4	0.2	0.59	9.4	0.0	2.5	2	1	1	3	3	3	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
NAD_binding_2	PF03446.10	gi|449067354|ref|YP_007434436.1|	-	0.1	12.4	0.1	0.84	9.4	0.0	2.4	1	1	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Usp	PF00582.21	gi|449067355|ref|YP_007434437.1|	-	1.7e-23	83.3	0.4	3.3e-23	82.4	0.3	1.4	1	1	0	1	1	1	1	Universal	stress	protein	family
Peptidase_C71	PF12386.3	gi|449067355|ref|YP_007434437.1|	-	0.026	13.9	0.0	0.032	13.6	0.0	1.2	1	0	0	1	1	1	0	Pseudomurein	endo-isopeptidase	Pei
ETF	PF01012.16	gi|449067355|ref|YP_007434437.1|	-	0.048	13.3	0.0	0.084	12.5	0.0	1.5	1	1	0	1	1	1	0	Electron	transfer	flavoprotein	domain
SHMT	PF00464.14	gi|449067356|ref|YP_007434438.1|	-	7.9e-65	218.7	0.0	1e-64	218.3	0.0	1.1	1	0	0	1	1	1	1	Serine	hydroxymethyltransferase
Beta_elim_lyase	PF01212.16	gi|449067356|ref|YP_007434438.1|	-	1.9e-10	40.3	0.1	2.5e-10	39.9	0.0	1.2	1	0	0	1	1	1	1	Beta-eliminating	lyase
Aminotran_1_2	PF00155.16	gi|449067356|ref|YP_007434438.1|	-	6e-09	35.3	0.0	2.6e-08	33.2	0.0	1.9	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.14	gi|449067356|ref|YP_007434438.1|	-	0.00049	18.9	0.1	0.0011	17.8	0.1	1.7	1	1	0	1	1	1	1	Aminotransferase	class-V
SelA	PF03841.8	gi|449067356|ref|YP_007434438.1|	-	0.00086	18.1	0.0	0.0026	16.5	0.0	1.8	1	0	0	1	1	1	1	L-seryl-tRNA	selenium	transferase
DegT_DnrJ_EryC1	PF01041.12	gi|449067356|ref|YP_007434438.1|	-	0.056	12.4	0.0	0.18	10.7	0.0	1.7	1	1	0	1	1	1	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
DUF3469	PF11952.3	gi|449067356|ref|YP_007434438.1|	-	0.7	9.6	3.3	2.7	7.7	0.0	2.9	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3469)
DUF919	PF06034.6	gi|449067356|ref|YP_007434438.1|	-	1.6	8.4	6.4	4.2	7.0	0.2	3.2	3	0	0	3	3	3	0	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF919)
HMG-CoA_red	PF00368.13	gi|449067357|ref|YP_007434439.1|	-	8e-144	478.8	1.0	9.2e-144	478.6	0.7	1.0	1	0	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	reductase
DUF35	PF01796.12	gi|449067358|ref|YP_007434440.1|	-	5.1e-14	52.2	0.1	7.3e-14	51.7	0.0	1.2	1	0	0	1	1	1	1	DUF35	OB-fold	domain
DUF35_N	PF12172.3	gi|449067358|ref|YP_007434440.1|	-	5.8e-05	22.8	0.0	8.6e-05	22.3	0.0	1.2	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Methyltransf_13	PF08421.6	gi|449067358|ref|YP_007434440.1|	-	0.0076	15.7	0.0	2.4	7.7	0.0	2.3	2	0	0	2	2	2	2	Putative	zinc	binding	domain
RecR	PF02132.10	gi|449067358|ref|YP_007434440.1|	-	0.023	14.1	1.3	0.065	12.6	0.9	1.7	1	1	1	2	2	2	0	RecR	protein
Desulfoferrod_N	PF06397.7	gi|449067358|ref|YP_007434440.1|	-	0.033	13.5	3.8	2.1	7.8	0.1	2.4	2	0	0	2	2	2	0	Desulfoferrodoxin,	N-terminal	domain
DZR	PF12773.2	gi|449067358|ref|YP_007434440.1|	-	0.036	13.8	0.8	0.053	13.3	0.6	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
Prim_Zn_Ribbon	PF08273.7	gi|449067358|ref|YP_007434440.1|	-	0.093	12.8	0.0	0.43	10.7	0.0	2.0	2	0	0	2	2	2	0	Zinc-binding	domain	of	primase-helicase
Zn-ribbon_8	PF09723.5	gi|449067358|ref|YP_007434440.1|	-	0.14	12.1	2.0	1.8	8.5	1.4	2.2	1	1	0	1	1	1	0	Zinc	ribbon	domain
ACP_syn_III	PF08545.5	gi|449067359|ref|YP_007434441.1|	-	0.00023	20.7	0.1	0.0094	15.5	0.0	2.5	2	0	0	2	2	2	2	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
ACP_syn_III_C	PF08541.5	gi|449067360|ref|YP_007434442.1|	-	3.2e-11	43.1	0.0	3e-10	39.9	0.0	2.6	4	0	0	4	4	4	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III	C	terminal
HMG_CoA_synt_N	PF01154.12	gi|449067360|ref|YP_007434442.1|	-	1.4e-05	24.7	0.1	2.2e-05	24.0	0.0	1.3	1	0	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	synthase	N	terminal
ACP_syn_III	PF08545.5	gi|449067360|ref|YP_007434442.1|	-	1.8e-05	24.3	0.2	4.2e-05	23.1	0.1	1.7	1	0	0	1	1	1	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
HMG_CoA_synt_C	PF08540.5	gi|449067360|ref|YP_007434442.1|	-	0.00022	20.8	0.0	0.022	14.2	0.0	2.1	1	1	1	2	2	2	2	Hydroxymethylglutaryl-coenzyme	A	synthase	C	terminal
AdoMet_dc	PF02675.10	gi|449067361|ref|YP_007434443.1|	-	2.9e-31	107.4	0.0	3.4e-31	107.2	0.0	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	decarboxylase
PapC_N	PF13954.1	gi|449067362|ref|YP_007434444.1|	-	0.0018	17.8	0.3	0.004	16.7	0.2	1.6	1	0	0	1	1	1	1	PapC	N-terminal	domain
Kei1	PF08552.6	gi|449067363|ref|YP_007434445.1|	-	0.1	12.2	0.0	0.1	12.2	0.0	1.1	1	0	0	1	1	1	0	Inositolphosphorylceramide	synthase	subunit	Kei1
HhH-GPD	PF00730.20	gi|449067364|ref|YP_007434446.1|	-	4.8e-06	26.8	0.1	8.1e-06	26.0	0.0	1.3	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
DNA_pol_lambd_f	PF10391.4	gi|449067364|ref|YP_007434446.1|	-	0.044	13.3	0.1	0.15	11.6	0.0	1.9	1	1	1	2	2	2	0	Fingers	domain	of	DNA	polymerase	lambda
2-Hacid_dh_C	PF02826.14	gi|449067365|ref|YP_007434447.1|	-	9e-53	178.0	0.3	1.7e-52	177.1	0.1	1.6	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.25	gi|449067365|ref|YP_007434447.1|	-	1.7e-34	118.1	0.8	1.9e-34	117.9	0.5	1.0	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
AdoHcyase_NAD	PF00670.16	gi|449067365|ref|YP_007434447.1|	-	1e-07	31.9	0.8	1e-07	31.9	0.5	1.9	2	0	0	2	2	2	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
NAD_binding_2	PF03446.10	gi|449067365|ref|YP_007434447.1|	-	1e-06	28.6	0.6	2.9e-06	27.2	0.1	2.0	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
AlaDh_PNT_C	PF01262.16	gi|449067365|ref|YP_007434447.1|	-	0.00095	18.7	4.2	0.067	12.7	0.1	3.7	2	1	2	4	4	4	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
3HCDH_N	PF02737.13	gi|449067365|ref|YP_007434447.1|	-	0.0021	17.7	0.2	0.0054	16.4	0.0	1.9	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
IlvN	PF07991.7	gi|449067365|ref|YP_007434447.1|	-	0.0037	16.6	0.2	0.0079	15.5	0.1	1.7	2	0	0	2	2	2	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
ELFV_dehydrog	PF00208.16	gi|449067365|ref|YP_007434447.1|	-	0.019	14.5	0.3	0.039	13.5	0.2	1.5	1	0	0	1	1	1	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
UDPG_MGDP_dh_N	PF03721.9	gi|449067365|ref|YP_007434447.1|	-	0.07	12.5	2.5	0.18	11.1	0.2	2.6	2	2	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
PTS_IIB	PF02302.12	gi|449067365|ref|YP_007434447.1|	-	0.13	12.7	6.8	0.56	10.7	0.6	3.4	3	1	0	3	3	3	0	PTS	system,	Lactose/Cellobiose	specific	IIB	subunit
F420_oxidored	PF03807.12	gi|449067365|ref|YP_007434447.1|	-	0.2	12.1	2.1	0.47	10.9	0.3	2.6	2	2	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
Pyr_redox	PF00070.22	gi|449067365|ref|YP_007434447.1|	-	0.51	10.7	3.6	4.4	7.7	0.1	3.5	2	1	1	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
TrkA_N	PF02254.13	gi|449067365|ref|YP_007434447.1|	-	0.69	9.9	4.4	1.9	8.5	0.0	3.0	3	1	0	3	3	3	0	TrkA-N	domain
Aminotran_5	PF00266.14	gi|449067366|ref|YP_007434448.1|	-	1.4e-26	93.0	0.0	1.7e-26	92.8	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-V
Aminotran_1_2	PF00155.16	gi|449067366|ref|YP_007434448.1|	-	4.3e-07	29.2	0.0	6.4e-07	28.6	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Beta_elim_lyase	PF01212.16	gi|449067366|ref|YP_007434448.1|	-	3.7e-06	26.3	0.0	5.5e-06	25.7	0.0	1.4	1	1	0	1	1	1	1	Beta-eliminating	lyase
Cys_Met_Meta_PP	PF01053.15	gi|449067366|ref|YP_007434448.1|	-	4.3e-06	25.2	0.0	6.6e-06	24.6	0.0	1.2	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
DegT_DnrJ_EryC1	PF01041.12	gi|449067366|ref|YP_007434448.1|	-	0.0099	14.9	0.0	0.016	14.2	0.0	1.2	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
DUF521	PF04412.8	gi|449067366|ref|YP_007434448.1|	-	0.013	14.0	0.0	0.019	13.4	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF521)
RNA_pol_Rpb6	PF01192.17	gi|449067367|ref|YP_007434449.1|	-	1.1e-17	63.4	0.1	1.5e-17	63.0	0.1	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb6
Pox_RNA_Pol_19	PF05320.7	gi|449067367|ref|YP_007434449.1|	-	0.00081	19.1	0.5	0.00081	19.1	0.3	1.0	1	0	0	1	1	1	1	Poxvirus	DNA-directed	RNA	polymerase	19	kDa	subunit
Topoisom_bac	PF01131.15	gi|449067368|ref|YP_007434450.1|	-	3.3e-98	329.1	0.4	4.8e-98	328.6	0.2	1.2	1	0	0	1	1	1	1	DNA	topoisomerase
Toprim	PF01751.17	gi|449067368|ref|YP_007434450.1|	-	1.5e-12	47.3	0.0	1.5e-12	47.3	0.0	2.7	3	1	0	3	3	3	1	Toprim	domain
Tmemb_cc2	PF10267.4	gi|449067368|ref|YP_007434450.1|	-	0.038	12.5	3.5	0.063	11.8	2.4	1.2	1	0	0	1	1	1	0	Predicted	transmembrane	and	coiled-coil	2	protein
AAA	PF00004.24	gi|449067369|ref|YP_007434451.1|	-	9.3e-42	142.3	0.1	1e-40	138.9	0.0	2.2	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
MIT	PF04212.13	gi|449067369|ref|YP_007434451.1|	-	4.4e-15	55.3	5.5	4.4e-15	55.3	3.8	1.9	2	0	0	2	2	1	1	MIT	(microtubule	interacting	and	transport)	domain
AAA_14	PF13173.1	gi|449067369|ref|YP_007434451.1|	-	2.8e-08	33.7	0.1	4e-07	29.9	0.0	2.5	1	1	2	3	3	2	1	AAA	domain
RuvB_N	PF05496.7	gi|449067369|ref|YP_007434451.1|	-	6.1e-08	31.9	0.0	9.4e-07	28.1	0.0	2.3	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_22	PF13401.1	gi|449067369|ref|YP_007434451.1|	-	2.9e-07	30.6	0.3	5.3e-06	26.5	0.0	2.9	3	1	0	3	3	2	1	AAA	domain
AAA_2	PF07724.9	gi|449067369|ref|YP_007434451.1|	-	3.2e-07	30.4	0.0	8e-07	29.1	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
AAA_16	PF13191.1	gi|449067369|ref|YP_007434451.1|	-	1.7e-06	28.1	0.0	0.00066	19.7	0.0	2.9	2	1	1	3	3	3	1	AAA	ATPase	domain
Vps4_C	PF09336.5	gi|449067369|ref|YP_007434451.1|	-	2.3e-06	27.3	0.3	1.6e-05	24.6	0.0	2.3	2	0	0	2	2	2	1	Vps4	C	terminal	oligomerisation	domain
AAA_17	PF13207.1	gi|449067369|ref|YP_007434451.1|	-	1.5e-05	25.7	0.1	0.00012	22.9	0.1	2.5	1	1	0	1	1	1	1	AAA	domain
AAA_25	PF13481.1	gi|449067369|ref|YP_007434451.1|	-	1.8e-05	24.2	0.1	0.015	14.7	0.0	2.6	1	1	1	2	2	2	2	AAA	domain
AAA_5	PF07728.9	gi|449067369|ref|YP_007434451.1|	-	6.6e-05	22.6	0.1	0.0022	17.7	0.0	3.0	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
Arch_ATPase	PF01637.13	gi|449067369|ref|YP_007434451.1|	-	8.1e-05	22.4	5.8	0.16	11.6	0.0	3.7	2	2	1	4	4	4	2	Archaeal	ATPase
Zeta_toxin	PF06414.7	gi|449067369|ref|YP_007434451.1|	-	0.00054	19.1	0.0	0.0018	17.4	0.0	1.9	2	0	0	2	2	2	1	Zeta	toxin
TIP49	PF06068.8	gi|449067369|ref|YP_007434451.1|	-	0.00058	18.6	0.0	0.0011	17.8	0.0	1.5	1	0	0	1	1	1	1	TIP49	C-terminus
Viral_helicase1	PF01443.13	gi|449067369|ref|YP_007434451.1|	-	0.0006	19.4	0.0	0.0023	17.4	0.0	1.8	2	0	0	2	2	2	1	Viral	(Superfamily	1)	RNA	helicase
AAA_10	PF12846.2	gi|449067369|ref|YP_007434451.1|	-	0.0012	18.3	0.0	4.2	6.7	0.0	3.1	3	0	0	3	3	3	0	AAA-like	domain
RNA_helicase	PF00910.17	gi|449067369|ref|YP_007434451.1|	-	0.0012	18.9	0.2	0.011	15.8	0.0	2.7	2	2	1	3	3	2	1	RNA	helicase
AAA_24	PF13479.1	gi|449067369|ref|YP_007434451.1|	-	0.0025	17.4	0.6	0.0052	16.4	0.0	1.9	3	0	0	3	3	1	1	AAA	domain
TPR_11	PF13414.1	gi|449067369|ref|YP_007434451.1|	-	0.0032	17.0	1.1	0.0072	15.9	0.8	1.6	1	0	0	1	1	1	1	TPR	repeat
ResIII	PF04851.10	gi|449067369|ref|YP_007434451.1|	-	0.0034	17.2	0.0	0.053	13.3	0.0	2.4	1	1	1	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
AAA_18	PF13238.1	gi|449067369|ref|YP_007434451.1|	-	0.0058	16.9	1.0	0.024	14.9	0.0	2.7	2	1	1	3	3	1	1	AAA	domain
Mg_chelatase	PF01078.16	gi|449067369|ref|YP_007434451.1|	-	0.0061	15.7	0.0	0.016	14.4	0.0	1.6	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
Sigma54_activat	PF00158.21	gi|449067369|ref|YP_007434451.1|	-	0.0062	16.0	0.0	0.08	12.4	0.0	2.3	1	1	0	1	1	1	1	Sigma-54	interaction	domain
AAA_19	PF13245.1	gi|449067369|ref|YP_007434451.1|	-	0.0091	15.7	0.0	0.021	14.5	0.0	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_33	PF13671.1	gi|449067369|ref|YP_007434451.1|	-	0.0093	15.8	0.0	0.02	14.7	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.12	gi|449067369|ref|YP_007434451.1|	-	0.014	14.7	0.0	0.031	13.6	0.0	1.6	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA-ATPase_like	PF09820.4	gi|449067369|ref|YP_007434451.1|	-	0.015	14.4	0.2	0.078	12.1	0.0	2.1	2	0	0	2	2	2	0	Predicted	AAA-ATPase
ATP-synt_ab	PF00006.20	gi|449067369|ref|YP_007434451.1|	-	0.016	14.6	0.0	0.034	13.6	0.0	1.5	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
DUF2075	PF09848.4	gi|449067369|ref|YP_007434451.1|	-	0.018	14.0	0.0	0.04	12.8	0.0	1.7	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
NACHT	PF05729.7	gi|449067369|ref|YP_007434451.1|	-	0.021	14.5	0.0	0.047	13.3	0.0	1.6	1	0	0	1	1	1	0	NACHT	domain
Parvo_NS1	PF01057.12	gi|449067369|ref|YP_007434451.1|	-	0.023	13.5	0.0	0.058	12.2	0.0	1.6	1	0	0	1	1	1	0	Parvovirus	non-structural	protein	NS1
AAA_3	PF07726.6	gi|449067369|ref|YP_007434451.1|	-	0.024	14.2	0.0	0.28	10.7	0.0	2.3	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
SKI	PF01202.17	gi|449067369|ref|YP_007434451.1|	-	0.026	14.3	0.0	0.082	12.7	0.0	1.8	1	0	0	1	1	1	0	Shikimate	kinase
NB-ARC	PF00931.17	gi|449067369|ref|YP_007434451.1|	-	0.048	12.5	0.0	0.084	11.7	0.0	1.4	1	0	0	1	1	1	0	NB-ARC	domain
ABC_tran	PF00005.22	gi|449067369|ref|YP_007434451.1|	-	0.058	13.6	0.0	0.4	10.9	0.0	2.1	2	1	0	2	2	2	0	ABC	transporter
AAA_28	PF13521.1	gi|449067369|ref|YP_007434451.1|	-	0.058	13.3	0.0	0.17	11.8	0.0	1.8	2	0	0	2	2	1	0	AAA	domain
Fe_hyd_SSU	PF02256.12	gi|449067369|ref|YP_007434451.1|	-	0.059	13.3	0.1	0.19	11.7	0.1	1.9	1	0	0	1	1	1	0	Iron	hydrogenase	small	subunit
KaiC	PF06745.8	gi|449067369|ref|YP_007434451.1|	-	0.09	11.8	1.4	1.4	7.9	0.0	2.9	1	1	2	3	3	3	0	KaiC
DUF1912	PF08930.5	gi|449067369|ref|YP_007434451.1|	-	0.093	12.8	2.9	0.98	9.5	0.2	3.1	3	0	0	3	3	2	0	Domain	of	unknown	function	(DUF1912)
TPR_1	PF00515.23	gi|449067369|ref|YP_007434451.1|	-	0.11	12.1	0.5	0.35	10.5	0.1	2.0	2	0	0	2	2	1	0	Tetratricopeptide	repeat
AAA_11	PF13086.1	gi|449067369|ref|YP_007434451.1|	-	0.13	11.8	0.0	0.3	10.6	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
CesA	PF11439.3	gi|449067369|ref|YP_007434451.1|	-	0.2	11.6	2.9	14	5.7	0.0	2.6	2	1	0	2	2	2	0	Type	III	secretion	system	filament	chaperone	CesA
AAA_23	PF13476.1	gi|449067369|ref|YP_007434451.1|	-	2.9	8.1	0.0	2.9	8.1	0.0	3.0	3	1	0	3	3	3	0	AAA	domain
HTH_27	PF13463.1	gi|449067370|ref|YP_007434452.1|	-	4.9e-06	26.7	0.1	0.0023	18.2	0.0	2.6	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
Snf7	PF03357.16	gi|449067370|ref|YP_007434452.1|	-	6.8e-06	25.5	3.5	1.2e-05	24.7	2.4	1.5	1	1	0	1	1	1	1	Snf7
DUF3231	PF11553.3	gi|449067370|ref|YP_007434452.1|	-	0.00049	19.6	0.1	0.00086	18.8	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3231)
MarR	PF01047.17	gi|449067370|ref|YP_007434452.1|	-	0.00065	19.3	0.0	0.0016	18.1	0.0	1.7	1	0	0	1	1	1	1	MarR	family
HTH_36	PF13730.1	gi|449067370|ref|YP_007434452.1|	-	0.00068	19.7	0.0	0.002	18.2	0.0	1.8	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|449067370|ref|YP_007434452.1|	-	0.00068	19.2	0.2	0.0064	16.1	0.0	2.4	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|449067370|ref|YP_007434452.1|	-	0.00073	19.1	0.0	0.002	17.7	0.0	1.8	1	0	0	1	1	1	1	MarR	family
EAP30	PF04157.11	gi|449067370|ref|YP_007434452.1|	-	0.0024	17.0	1.5	0.0076	15.4	0.0	2.3	3	0	0	3	3	3	1	EAP30/Vps36	family
RPA_C	PF08784.6	gi|449067370|ref|YP_007434452.1|	-	0.0033	17.8	0.0	0.0078	16.6	0.0	1.7	1	1	0	1	1	1	1	Replication	protein	A	C	terminal
HTH_24	PF13412.1	gi|449067370|ref|YP_007434452.1|	-	0.0067	15.7	0.0	0.024	14.0	0.0	2.0	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
GntR	PF00392.16	gi|449067370|ref|YP_007434452.1|	-	0.014	14.7	0.0	0.061	12.7	0.0	2.1	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
HTH_11	PF08279.7	gi|449067370|ref|YP_007434452.1|	-	0.021	14.4	0.3	0.083	12.5	0.0	2.2	2	0	0	2	2	2	0	HTH	domain
DUF2250	PF10007.4	gi|449067370|ref|YP_007434452.1|	-	0.047	13.5	0.6	0.19	11.6	0.0	2.3	3	0	0	3	3	3	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Rrf2	PF02082.15	gi|449067370|ref|YP_007434452.1|	-	0.054	13.6	0.0	0.39	10.8	0.0	2.4	2	0	0	2	2	2	0	Transcriptional	regulator
NIT	PF08376.5	gi|449067370|ref|YP_007434452.1|	-	0.068	12.6	0.6	0.13	11.7	0.4	1.4	1	0	0	1	1	1	0	Nitrate	and	nitrite	sensing
Fe_dep_repress	PF01325.14	gi|449067370|ref|YP_007434452.1|	-	0.086	12.7	0.0	0.25	11.3	0.0	1.9	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DUF1836	PF08876.6	gi|449067370|ref|YP_007434452.1|	-	0.13	12.0	2.1	0.45	10.3	0.3	2.6	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF1836)
DUF1664	PF07889.7	gi|449067370|ref|YP_007434452.1|	-	4.2	7.1	6.5	2	8.2	2.1	2.2	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
Acetyltransf_11	PF13720.1	gi|449067370|ref|YP_007434452.1|	-	6.1	7.1	6.3	1.8	8.8	0.1	2.8	2	1	1	3	3	2	0	Udp	N-acetylglucosamine	O-acyltransferase;	Domain	2
NPV_P10	PF05531.7	gi|449067371|ref|YP_007434453.1|	-	0.1	12.8	1.1	8.6	6.6	0.1	2.6	2	1	0	2	2	2	0	Nucleopolyhedrovirus	P10	protein
Herpes_UL25	PF01499.11	gi|449067371|ref|YP_007434453.1|	-	0.15	10.3	0.6	0.17	10.1	0.4	1.1	1	0	0	1	1	1	0	Herpesvirus	UL25	family
SHOCT	PF09851.4	gi|449067371|ref|YP_007434453.1|	-	0.23	10.9	4.0	0.1	12.1	0.6	2.2	2	0	0	2	2	2	0	Short	C-terminal	domain
PRC	PF05239.11	gi|449067371|ref|YP_007434453.1|	-	0.29	11.0	4.1	0.51	10.2	2.8	1.4	1	0	0	1	1	1	0	PRC-barrel	domain
SPX	PF03105.14	gi|449067371|ref|YP_007434453.1|	-	0.31	10.7	3.8	0.54	9.9	2.6	1.4	1	1	0	1	1	1	0	SPX	domain
DUF883	PF05957.8	gi|449067371|ref|YP_007434453.1|	-	1.5	9.2	3.9	0.63	10.4	1.1	1.6	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF883)
DUF904	PF06005.7	gi|449067371|ref|YP_007434453.1|	-	2.4	8.5	10.4	5.7	7.3	2.9	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF904)
DUF724	PF05266.9	gi|449067371|ref|YP_007434453.1|	-	4.1	6.9	7.4	1.2	8.7	2.3	1.9	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF724)
Syntaxin	PF00804.20	gi|449067371|ref|YP_007434453.1|	-	6.5	6.9	9.4	35	4.6	6.5	2.2	1	1	0	1	1	1	0	Syntaxin
Oxidored_q5_N	PF01059.12	gi|449067372|ref|YP_007434454.1|	-	0.00089	19.1	2.6	0.001	18.9	1.8	1.2	1	0	0	1	1	1	1	NADH-ubiquinone	oxidoreductase	chain	4,	amino	terminus
Phlebovirus_G2	PF07245.6	gi|449067372|ref|YP_007434454.1|	-	0.003	15.8	1.2	0.003	15.8	0.8	1.4	1	1	1	2	2	2	1	Phlebovirus	glycoprotein	G2
Fig1	PF12351.3	gi|449067372|ref|YP_007434454.1|	-	0.36	10.6	6.2	0.41	10.5	4.3	1.1	1	0	0	1	1	1	0	Ca2+	regulator	and	membrane	fusion	protein	Fig1
Phlebovirus_G1	PF07243.6	gi|449067372|ref|YP_007434454.1|	-	0.49	8.4	2.4	0.55	8.3	1.7	1.1	1	0	0	1	1	1	0	Phlebovirus	glycoprotein	G1
YrhC	PF14143.1	gi|449067372|ref|YP_007434454.1|	-	1.3	8.9	5.1	0.3	11.0	0.8	1.9	2	0	0	2	2	2	0	YrhC-like	protein
DUF3975	PF13126.1	gi|449067372|ref|YP_007434454.1|	-	1.3	9.1	7.1	1.6	8.9	4.9	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3975)
Tetraspannin	PF00335.15	gi|449067372|ref|YP_007434454.1|	-	1.7	7.8	7.8	2.4	7.4	5.4	1.2	1	0	0	1	1	1	0	Tetraspanin	family
DUF2929	PF11151.3	gi|449067372|ref|YP_007434454.1|	-	4.3	7.4	12.6	0.68	10.0	0.5	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2929)
DUF751	PF05421.6	gi|449067372|ref|YP_007434454.1|	-	7.2	6.9	11.1	7.5	6.9	5.1	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF751)
Enolase_C	PF00113.17	gi|449067373|ref|YP_007434455.1|	-	1.8e-93	312.8	0.1	2.3e-93	312.4	0.0	1.1	1	0	0	1	1	1	1	Enolase,	C-terminal	TIM	barrel	domain
Enolase_N	PF03952.11	gi|449067373|ref|YP_007434455.1|	-	2e-37	128.0	0.3	3.9e-37	127.1	0.2	1.5	1	0	0	1	1	1	1	Enolase,	N-terminal	domain
MR_MLE	PF01188.16	gi|449067373|ref|YP_007434455.1|	-	0.0036	17.8	0.0	0.0083	16.6	0.0	1.6	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
Claudin_3	PF06653.6	gi|449067374|ref|YP_007434456.1|	-	0.98	9.1	10.0	1.2	8.8	7.0	1.2	1	0	0	1	1	1	0	Tight	junction	protein,	Claudin-like
Zn-ribbon_8	PF09723.5	gi|449067375|ref|YP_007434457.1|	-	0.00088	19.1	1.1	0.52	10.3	0.2	2.3	2	0	0	2	2	2	2	Zinc	ribbon	domain
CpXC	PF14353.1	gi|449067375|ref|YP_007434457.1|	-	0.004	17.1	0.0	0.0066	16.4	0.0	1.3	1	0	0	1	1	1	1	CpXC	protein
Zn_Tnp_IS1595	PF12760.2	gi|449067375|ref|YP_007434457.1|	-	0.0047	16.7	1.1	0.012	15.3	0.8	1.6	1	1	0	1	1	1	1	Transposase	zinc-ribbon	domain
Cren7	PF11520.3	gi|449067375|ref|YP_007434457.1|	-	0.0064	16.1	1.7	0.0075	15.8	0.3	1.9	1	1	0	1	1	1	1	Chromatin	protein	Cren7
zf-ribbon_3	PF13248.1	gi|449067375|ref|YP_007434457.1|	-	0.0073	15.4	5.7	0.051	12.7	0.1	2.3	2	0	0	2	2	2	1	zinc-ribbon	domain
DZR	PF12773.2	gi|449067375|ref|YP_007434457.1|	-	0.0085	15.8	1.0	0.026	14.3	0.7	1.7	1	1	0	1	1	1	1	Double	zinc	ribbon
zf-ZPR1	PF03367.8	gi|449067375|ref|YP_007434457.1|	-	0.0089	15.1	0.1	0.013	14.6	0.1	1.4	1	1	0	1	1	1	1	ZPR1	zinc-finger	domain
zf-ISL3	PF14690.1	gi|449067375|ref|YP_007434457.1|	-	0.013	15.5	0.3	0.41	10.7	0.0	2.3	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-IS66	PF13005.2	gi|449067375|ref|YP_007434457.1|	-	0.014	15.3	0.4	0.014	15.3	0.3	1.9	2	1	0	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
zinc_ribbon_2	PF13240.1	gi|449067375|ref|YP_007434457.1|	-	0.016	14.6	6.2	0.17	11.4	4.4	2.2	1	1	0	1	1	1	0	zinc-ribbon	domain
zf-3CxxC	PF13695.1	gi|449067375|ref|YP_007434457.1|	-	0.018	15.2	0.5	0.058	13.6	0.1	1.9	2	0	0	2	2	2	0	Zinc-binding	domain
OrfB_Zn_ribbon	PF07282.6	gi|449067375|ref|YP_007434457.1|	-	0.019	14.6	0.4	6.3	6.5	0.0	2.4	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
DUF4379	PF14311.1	gi|449067375|ref|YP_007434457.1|	-	0.021	14.5	2.2	0.035	13.9	0.2	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4379)
zinc_ribbon_5	PF13719.1	gi|449067375|ref|YP_007434457.1|	-	0.028	13.9	6.6	0.34	10.5	0.1	2.8	3	0	0	3	3	3	0	zinc-ribbon	domain
UPF0547	PF10571.4	gi|449067375|ref|YP_007434457.1|	-	0.028	14.0	6.2	1.5	8.5	0.4	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zf-NADH-PPase	PF09297.6	gi|449067375|ref|YP_007434457.1|	-	0.042	13.3	0.4	7.4	6.1	0.0	2.3	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
Ogr_Delta	PF04606.7	gi|449067375|ref|YP_007434457.1|	-	0.052	13.2	1.9	1.8	8.2	0.1	2.2	2	0	0	2	2	2	0	Ogr/Delta-like	zinc	finger
zf-nanos	PF05741.8	gi|449067375|ref|YP_007434457.1|	-	0.076	12.9	1.3	3.3	7.7	1.1	2.2	1	1	1	2	2	2	0	Nanos	RNA	binding	domain
TFIIS_C	PF01096.13	gi|449067375|ref|YP_007434457.1|	-	0.077	12.6	6.1	0.15	11.7	0.4	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zinc_ribbon_4	PF13717.1	gi|449067375|ref|YP_007434457.1|	-	0.097	12.3	7.1	0.8	9.4	0.2	2.8	3	0	0	3	3	3	0	zinc-ribbon	domain
zf-H2C2_2	PF13465.1	gi|449067375|ref|YP_007434457.1|	-	0.2	11.9	0.9	11	6.4	0.1	2.3	2	0	0	2	2	2	0	Zinc-finger	double	domain
Cys_rich_CPXG	PF14255.1	gi|449067375|ref|YP_007434457.1|	-	0.36	10.6	1.6	17	5.2	0.0	2.7	3	0	0	3	3	3	0	Cysteine-rich	CPXCG
DNA_RNApol_7kD	PF03604.8	gi|449067375|ref|YP_007434457.1|	-	0.46	9.9	2.4	2.8	7.4	0.1	2.4	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
TF_Zn_Ribbon	PF08271.7	gi|449067375|ref|YP_007434457.1|	-	6.1	6.2	9.7	4	6.8	0.3	2.8	3	0	0	3	3	3	0	TFIIB	zinc-binding
DUF1610	PF07754.6	gi|449067375|ref|YP_007434457.1|	-	8.2	6.6	10.8	2.2	8.4	1.9	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
Peptidase_S24	PF00717.18	gi|449067376|ref|YP_007434458.1|	-	0.00025	20.6	0.4	0.00036	20.1	0.3	1.2	1	0	0	1	1	1	1	Peptidase	S24-like
DUF2649	PF10854.3	gi|449067376|ref|YP_007434458.1|	-	0.11	12.5	0.4	0.25	11.5	0.3	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2649)
GDC-P	PF02347.11	gi|449067377|ref|YP_007434459.1|	-	1.6e-14	53.4	0.0	9.8e-14	50.8	0.0	1.8	2	0	0	2	2	2	1	Glycine	cleavage	system	P-protein
Aminotran_5	PF00266.14	gi|449067377|ref|YP_007434459.1|	-	9.8e-07	27.8	0.0	1.7e-06	27.0	0.0	1.5	1	1	0	1	1	1	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.16	gi|449067377|ref|YP_007434459.1|	-	0.0033	16.6	0.0	0.0054	15.9	0.0	1.3	1	0	0	1	1	1	1	Beta-eliminating	lyase
GDC-P	PF02347.11	gi|449067378|ref|YP_007434460.1|	-	6.9e-119	397.3	0.0	8.8e-119	396.9	0.0	1.0	1	0	0	1	1	1	1	Glycine	cleavage	system	P-protein
GCV_T	PF01571.16	gi|449067379|ref|YP_007434461.1|	-	1.4e-49	168.3	0.0	1.7e-49	168.0	0.0	1.1	1	0	0	1	1	1	1	Aminomethyltransferase	folate-binding	domain
GCV_T_C	PF08669.6	gi|449067379|ref|YP_007434461.1|	-	2.4e-20	72.3	0.0	3.6e-20	71.7	0.0	1.3	1	0	0	1	1	1	1	Glycine	cleavage	T-protein	C-terminal	barrel	domain
GCV_H	PF01597.14	gi|449067380|ref|YP_007434462.1|	-	5.3e-43	145.5	0.5	6e-43	145.3	0.3	1.0	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
Biotin_lipoyl	PF00364.17	gi|449067380|ref|YP_007434462.1|	-	0.00025	20.6	0.1	0.00056	19.5	0.1	1.5	1	0	0	1	1	1	1	Biotin-requiring	enzyme
RnfC_N	PF13375.1	gi|449067380|ref|YP_007434462.1|	-	0.0028	17.3	0.7	0.0062	16.2	0.1	1.8	2	0	0	2	2	2	1	RnfC	Barrel	sandwich	hybrid	domain
PAC2	PF09754.4	gi|449067381|ref|YP_007434463.1|	-	8.7e-37	127.1	0.0	1.1e-36	126.8	0.0	1.0	1	0	0	1	1	1	1	PAC2	family
SF-assemblin	PF06705.6	gi|449067382|ref|YP_007434464.1|	-	0.016	14.4	1.2	0.017	14.2	0.8	1.2	1	0	0	1	1	1	0	SF-assemblin/beta	giardin
IATP	PF04568.7	gi|449067382|ref|YP_007434464.1|	-	0.043	13.8	3.6	4.1	7.4	3.1	2.1	1	1	0	2	2	2	0	Mitochondrial	ATPase	inhibitor,	IATP
ArsR	PF09824.4	gi|449067382|ref|YP_007434464.1|	-	0.071	12.4	1.1	0.096	12.0	0.7	1.3	1	1	0	1	1	1	0	ArsR	transcriptional	regulator
DUF883	PF05957.8	gi|449067382|ref|YP_007434464.1|	-	0.09	13.1	0.3	0.14	12.5	0.2	1.4	1	1	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF883)
Shikimate_DH	PF01488.15	gi|449067382|ref|YP_007434464.1|	-	0.095	12.7	0.0	0.13	12.3	0.0	1.3	1	1	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
HSCB_C	PF07743.8	gi|449067382|ref|YP_007434464.1|	-	0.11	13.0	1.5	0.11	13.0	1.0	2.0	2	0	0	2	2	2	0	HSCB	C-terminal	oligomerisation	domain
MutS_IV	PF05190.13	gi|449067382|ref|YP_007434464.1|	-	0.18	11.9	3.1	0.36	11.0	2.0	1.7	1	1	0	1	1	1	0	MutS	family	domain	IV
Hemagglutinin	PF00509.13	gi|449067382|ref|YP_007434464.1|	-	0.19	9.8	0.7	0.21	9.6	0.5	1.0	1	0	0	1	1	1	0	Haemagglutinin
CRA	PF06589.6	gi|449067382|ref|YP_007434464.1|	-	0.48	9.7	2.3	1	8.6	1.6	1.5	1	0	0	1	1	1	0	Circumsporozoite-related	antigen	(CRA)
Transposase_22	PF02994.9	gi|449067382|ref|YP_007434464.1|	-	1.9	6.9	9.4	2.3	6.6	0.1	2.0	1	1	1	2	2	2	0	L1	transposable	element
Antitoxin-MazE	PF04014.13	gi|449067383|ref|YP_007434465.1|	-	6.2e-09	35.3	0.2	1.8e-08	33.9	0.2	1.8	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
Ins_allergen_rp	PF06757.8	gi|449067383|ref|YP_007434465.1|	-	0.0062	16.0	0.8	0.14	11.5	0.5	2.8	1	1	0	1	1	1	1	Insect	allergen	related	repeat,	nitrile-specifier	detoxification
DED	PF01335.16	gi|449067383|ref|YP_007434465.1|	-	0.053	13.6	0.5	0.053	13.6	0.4	2.1	2	0	0	2	2	2	0	Death	effector	domain
ABC_tran	PF00005.22	gi|449067384|ref|YP_007434466.1|	-	3.8e-23	82.2	0.2	5.2e-23	81.8	0.2	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|449067384|ref|YP_007434466.1|	-	1.4e-11	44.9	1.7	9e-11	42.2	1.2	1.9	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|449067384|ref|YP_007434466.1|	-	2.4e-07	30.2	0.9	7.4e-07	28.6	0.6	1.7	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
DUF258	PF03193.11	gi|449067384|ref|YP_007434466.1|	-	0.0053	15.9	0.1	0.0093	15.1	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_29	PF13555.1	gi|449067384|ref|YP_007434466.1|	-	0.0074	15.7	0.1	0.016	14.7	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|449067384|ref|YP_007434466.1|	-	0.012	15.9	1.1	0.018	15.3	0.7	1.5	1	1	0	1	1	1	0	AAA	domain
AAA_25	PF13481.1	gi|449067384|ref|YP_007434466.1|	-	0.016	14.6	0.0	0.03	13.7	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|449067384|ref|YP_007434466.1|	-	0.017	15.3	0.2	0.042	14.0	0.2	1.8	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_13	PF13166.1	gi|449067384|ref|YP_007434466.1|	-	0.019	13.4	0.1	0.043	12.2	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
AAA_22	PF13401.1	gi|449067384|ref|YP_007434466.1|	-	0.038	14.1	0.1	0.09	12.9	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
Arch_ATPase	PF01637.13	gi|449067384|ref|YP_007434466.1|	-	0.049	13.3	0.1	0.078	12.6	0.1	1.3	1	0	0	1	1	1	0	Archaeal	ATPase
PduV-EutP	PF10662.4	gi|449067384|ref|YP_007434466.1|	-	0.076	12.5	0.0	0.13	11.7	0.0	1.3	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_33	PF13671.1	gi|449067384|ref|YP_007434466.1|	-	0.086	12.7	0.0	0.12	12.2	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
UPF0079	PF02367.12	gi|449067384|ref|YP_007434466.1|	-	0.12	11.9	0.1	0.26	10.9	0.0	1.5	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
UPF0051	PF01458.12	gi|449067385|ref|YP_007434467.1|	-	7e-59	199.0	0.0	1e-58	198.5	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
UPF0051	PF01458.12	gi|449067386|ref|YP_007434468.1|	-	1.4e-42	145.7	0.9	1.8e-42	145.3	0.6	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
DUF1977	PF09320.6	gi|449067386|ref|YP_007434468.1|	-	0.099	12.8	0.2	14	5.9	0.0	2.6	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF1977)
RHH_1	PF01402.16	gi|449067387|ref|YP_007434469.1|	-	8.9e-10	38.0	0.6	9.6e-10	37.9	0.4	1.0	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
RHH_3	PF12651.2	gi|449067387|ref|YP_007434469.1|	-	1.5e-05	24.6	2.0	2.1e-05	24.1	1.4	1.3	1	1	0	1	1	1	1	Ribbon-helix-helix	domain
DUF2191	PF09957.4	gi|449067387|ref|YP_007434469.1|	-	0.021	14.6	1.4	0.11	12.2	1.0	1.9	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2191)
ADH_N	PF08240.7	gi|449067388|ref|YP_007434470.1|	-	6.8e-29	99.8	0.9	1.3e-28	98.8	0.2	1.8	2	0	0	2	2	2	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|449067388|ref|YP_007434470.1|	-	1.2e-21	76.5	0.1	3.5e-21	75.1	0.1	1.8	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|449067388|ref|YP_007434470.1|	-	1.4e-06	29.2	0.0	4.6e-06	27.5	0.0	1.8	2	0	0	2	2	2	1	Zinc-binding	dehydrogenase
NAD_binding_10	PF13460.1	gi|449067388|ref|YP_007434470.1|	-	0.00095	19.2	0.2	0.0016	18.5	0.2	1.5	1	1	0	1	1	1	1	NADH(P)-binding
AlaDh_PNT_C	PF01262.16	gi|449067388|ref|YP_007434470.1|	-	0.0018	17.8	0.1	0.0042	16.6	0.0	1.6	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
YjeF_N	PF03853.10	gi|449067388|ref|YP_007434470.1|	-	0.0093	15.5	0.1	0.014	14.9	0.1	1.3	1	0	0	1	1	1	1	YjeF-related	protein	N-terminus
SIS_2	PF13580.1	gi|449067388|ref|YP_007434470.1|	-	0.019	14.6	0.3	0.095	12.4	0.1	2.3	2	1	0	2	2	2	0	SIS	domain
DapB_N	PF01113.15	gi|449067388|ref|YP_007434470.1|	-	0.036	13.9	0.6	0.38	10.6	0.4	2.3	1	1	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
BetaGal_dom2	PF10435.4	gi|449067388|ref|YP_007434470.1|	-	0.038	13.3	0.1	0.065	12.5	0.1	1.3	1	0	0	1	1	1	0	Beta-galactosidase,	domain	2
tRNA-synt_1d	PF00750.14	gi|449067389|ref|YP_007434471.1|	-	2.4e-46	158.2	1.2	2.1e-24	86.0	0.3	2.2	1	1	0	2	2	2	2	tRNA	synthetases	class	I	(R)
DALR_1	PF05746.10	gi|449067389|ref|YP_007434471.1|	-	4.3e-25	87.9	0.0	1.3e-24	86.4	0.0	1.8	1	0	0	1	1	1	1	DALR	anticodon	binding	domain
tRNA-synt_1e	PF01406.14	gi|449067389|ref|YP_007434471.1|	-	0.0013	17.9	1.6	0.37	9.8	0.1	2.8	3	1	0	3	3	3	2	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1g	PF09334.6	gi|449067389|ref|YP_007434471.1|	-	0.0015	17.2	0.3	0.036	12.7	0.1	2.7	3	0	0	3	3	3	1	tRNA	synthetases	class	I	(M)
tRNA-synt_1	PF00133.17	gi|449067389|ref|YP_007434471.1|	-	0.0042	15.1	0.3	0.012	13.6	0.0	1.8	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
MutS_III	PF05192.13	gi|449067389|ref|YP_007434471.1|	-	0.024	14.4	0.9	0.053	13.2	0.6	1.8	1	1	0	1	1	1	0	MutS	domain	III
tRNA-synt_1f	PF01921.13	gi|449067389|ref|YP_007434471.1|	-	0.11	11.2	0.5	4.7	5.7	0.0	2.9	3	0	0	3	3	3	0	tRNA	synthetases	class	I	(K)
FlgN	PF05130.7	gi|449067389|ref|YP_007434471.1|	-	0.12	12.6	0.0	16	5.7	0.0	2.6	2	0	0	2	2	2	0	FlgN	protein
DOT1	PF08123.8	gi|449067390|ref|YP_007434472.1|	-	0.21	10.8	1.3	0.21	10.8	0.9	1.1	1	0	0	1	1	1	0	Histone	methylation	protein	DOT1
DUF763	PF05559.6	gi|449067392|ref|YP_007434474.1|	-	0.013	14.4	0.3	0.014	14.4	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF763)
TrmB	PF01978.14	gi|449067392|ref|YP_007434474.1|	-	0.015	15.0	0.1	0.027	14.1	0.1	1.4	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_9	PF08221.6	gi|449067392|ref|YP_007434474.1|	-	0.026	14.3	0.0	0.039	13.8	0.0	1.2	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
DRP	PF06044.7	gi|449067392|ref|YP_007434474.1|	-	0.033	13.2	0.0	0.037	13.0	0.0	1.3	1	1	0	1	1	1	0	Dam-replacing	family
DDE_Tnp_1_assoc	PF13808.1	gi|449067392|ref|YP_007434474.1|	-	0.036	13.7	0.0	0.045	13.4	0.0	1.2	1	0	0	1	1	1	0	DDE_Tnp_1-associated
DUF4423	PF14394.1	gi|449067392|ref|YP_007434474.1|	-	0.091	12.2	0.3	0.13	11.7	0.2	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
Methyltrn_RNA_2	PF04013.7	gi|449067392|ref|YP_007434474.1|	-	0.15	11.5	0.4	0.18	11.3	0.3	1.1	1	0	0	1	1	1	0	Putative	SAM-dependent	RNA	methyltransferase
RPT	PF13446.1	gi|449067392|ref|YP_007434474.1|	-	0.19	11.1	0.8	1.3	8.5	0.6	2.3	1	1	0	1	1	1	0	A	repeated	domain	in	UCH-protein
CLU_N	PF15044.1	gi|449067393|ref|YP_007434475.1|	-	0.02	15.0	0.1	0.03	14.4	0.0	1.4	1	1	0	1	1	1	0	Mitochondrial	function,	CLU-N-term
Cpn60_TCP1	PF00118.19	gi|449067394|ref|YP_007434476.1|	-	7.6e-160	532.6	14.9	8.7e-160	532.5	10.3	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
MCR_alpha_N	PF02745.10	gi|449067394|ref|YP_007434476.1|	-	0.037	13.2	0.5	0.11	11.6	0.1	1.9	2	0	0	2	2	2	0	Methyl-coenzyme	M	reductase	alpha	subunit,	N-terminal	domain
DZR	PF12773.2	gi|449067395|ref|YP_007434477.1|	-	0.00028	20.6	7.3	0.0075	16.0	1.1	2.4	2	0	0	2	2	2	2	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|449067395|ref|YP_007434477.1|	-	0.00056	19.0	9.3	0.0034	16.5	1.6	2.9	2	1	1	3	3	3	1	zinc-ribbon	domain
Zn_Tnp_IS91	PF14319.1	gi|449067395|ref|YP_007434477.1|	-	0.007	15.8	1.3	0.038	13.4	0.0	2.2	2	0	0	2	2	2	1	Transposase	zinc-binding	domain
Cript	PF10235.4	gi|449067395|ref|YP_007434477.1|	-	0.027	14.8	0.5	0.027	14.8	0.4	2.8	2	1	0	2	2	2	0	Microtubule-associated	protein	CRIPT
zf-FPG_IleRS	PF06827.9	gi|449067395|ref|YP_007434477.1|	-	0.045	13.3	8.0	0.14	11.7	1.9	3.0	2	1	1	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
Hs1pro-1_C	PF07014.7	gi|449067395|ref|YP_007434477.1|	-	0.06	12.6	0.4	0.089	12.0	0.3	1.2	1	0	0	1	1	1	0	Hs1pro-1	protein	C-terminus
FYVE	PF01363.16	gi|449067395|ref|YP_007434477.1|	-	0.11	12.3	4.5	3.2	7.7	0.4	2.4	2	0	0	2	2	2	0	FYVE	zinc	finger
zinc_ribbon_2	PF13240.1	gi|449067395|ref|YP_007434477.1|	-	0.17	11.4	17.0	0.13	11.7	4.2	3.2	3	0	0	3	3	3	0	zinc-ribbon	domain
zf-FCS	PF06467.9	gi|449067395|ref|YP_007434477.1|	-	0.32	10.6	4.7	4.5	6.9	0.7	3.2	2	1	1	3	3	3	0	MYM-type	Zinc	finger	with	FCS	sequence	motif
DUF2318	PF10080.4	gi|449067395|ref|YP_007434477.1|	-	0.81	9.4	6.4	0.97	9.2	0.5	2.4	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2318)
UPF0547	PF10571.4	gi|449067395|ref|YP_007434477.1|	-	4.5	7.0	7.8	0.56	9.9	0.3	2.8	3	0	0	3	3	3	0	Uncharacterised	protein	family	UPF0547
DNA_RNApol_7kD	PF03604.8	gi|449067396|ref|YP_007434478.1|	-	0.063	12.7	1.4	0.15	11.5	0.0	2.1	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
DUF3782	PF12644.2	gi|449067396|ref|YP_007434478.1|	-	0.14	11.9	2.7	4	7.3	2.3	2.7	2	2	0	2	2	2	0	Protein	of	unknown	function	(DUF3782)
Transcrip_reg	PF01709.15	gi|449067397|ref|YP_007434479.1|	-	0.043	12.9	0.3	0.056	12.5	0.2	1.1	1	0	0	1	1	1	0	Transcriptional	regulator
FKBP_N	PF01346.13	gi|449067397|ref|YP_007434479.1|	-	0.07	13.1	1.5	0.096	12.7	1.0	1.1	1	0	0	1	1	1	0	Domain	amino	terminal	to	FKBP-type	peptidyl-prolyl	isomerase
HTH_45	PF14947.1	gi|449067398|ref|YP_007434480.1|	-	5.1e-05	23.0	0.5	0.00016	21.3	0.1	2.0	2	0	0	2	2	2	1	Winged	helix-turn-helix
Rrf2	PF02082.15	gi|449067398|ref|YP_007434480.1|	-	0.0011	18.9	0.0	0.031	14.4	0.0	2.7	2	1	1	3	3	3	1	Transcriptional	regulator
TrmB	PF01978.14	gi|449067398|ref|YP_007434480.1|	-	0.0034	17.0	0.0	0.011	15.3	0.0	1.9	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_23	PF13384.1	gi|449067398|ref|YP_007434480.1|	-	0.0098	15.5	0.0	0.031	13.9	0.0	1.8	1	0	0	1	1	1	1	Homeodomain-like	domain
FeoC	PF09012.5	gi|449067398|ref|YP_007434480.1|	-	0.011	15.4	0.0	0.026	14.2	0.0	1.6	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
HTH_5	PF01022.15	gi|449067398|ref|YP_007434480.1|	-	0.018	14.6	0.0	0.04	13.5	0.0	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
MarR	PF01047.17	gi|449067398|ref|YP_007434480.1|	-	0.019	14.6	0.0	8.3	6.1	0.0	2.6	2	0	0	2	2	2	0	MarR	family
MarR_2	PF12802.2	gi|449067398|ref|YP_007434480.1|	-	0.023	14.3	0.0	0.058	13.0	0.0	1.6	1	0	0	1	1	1	0	MarR	family
PPO1_KFDV	PF12143.3	gi|449067398|ref|YP_007434480.1|	-	0.066	13.0	1.2	0.13	12.1	0.9	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF_B2219)
HTH_29	PF13551.1	gi|449067398|ref|YP_007434480.1|	-	0.066	13.3	0.1	0.89	9.7	0.0	2.4	2	1	1	3	3	3	0	Winged	helix-turn	helix
DUF4163	PF13739.1	gi|449067398|ref|YP_007434480.1|	-	0.12	13.1	5.4	0.23	12.2	3.8	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4163)
NAD_kinase	PF01513.16	gi|449067399|ref|YP_007434481.1|	-	2.2e-49	167.7	0.1	2.4e-49	167.6	0.1	1.0	1	0	0	1	1	1	1	ATP-NAD	kinase
DAGK_cat	PF00781.19	gi|449067399|ref|YP_007434481.1|	-	0.0025	17.2	0.0	0.015	14.7	0.0	2.2	2	0	0	2	2	2	1	Diacylglycerol	kinase	catalytic	domain
HTH_12	PF08461.5	gi|449067400|ref|YP_007434482.1|	-	0.0013	18.4	0.3	0.0027	17.4	0.2	1.5	1	0	0	1	1	1	1	Ribonuclease	R	winged-helix	domain
Ribosomal_S19e	PF01090.14	gi|449067400|ref|YP_007434482.1|	-	0.011	15.1	0.0	0.024	14.0	0.0	1.5	1	0	0	1	1	1	0	Ribosomal	protein	S19e
HTH_45	PF14947.1	gi|449067400|ref|YP_007434482.1|	-	0.028	14.2	0.1	0.08	12.7	0.0	1.9	1	0	0	1	1	1	0	Winged	helix-turn-helix
Fe_dep_repress	PF01325.14	gi|449067400|ref|YP_007434482.1|	-	0.051	13.5	0.0	0.092	12.6	0.0	1.4	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DNA_pol3_delta	PF06144.8	gi|449067400|ref|YP_007434482.1|	-	0.051	13.0	1.1	0.12	11.8	0.7	1.6	1	0	0	1	1	1	0	DNA	polymerase	III,	delta	subunit
HTH_27	PF13463.1	gi|449067400|ref|YP_007434482.1|	-	0.061	13.6	0.1	0.16	12.3	0.0	1.8	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
HTH_11	PF08279.7	gi|449067400|ref|YP_007434482.1|	-	0.064	12.9	1.2	0.22	11.1	0.1	2.3	2	0	0	2	2	2	0	HTH	domain
MarR	PF01047.17	gi|449067400|ref|YP_007434482.1|	-	0.065	12.9	0.2	0.12	12.0	0.1	1.4	1	0	0	1	1	1	0	MarR	family
Replic_Relax	PF13814.1	gi|449067400|ref|YP_007434482.1|	-	0.14	11.9	0.0	0.2	11.5	0.0	1.2	1	0	0	1	1	1	0	Replication-relaxation
OTCace	PF00185.19	gi|449067401|ref|YP_007434483.1|	-	8.7e-52	175.1	0.1	1.3e-51	174.6	0.0	1.3	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
OTCace_N	PF02729.16	gi|449067401|ref|YP_007434483.1|	-	5.6e-45	152.4	0.0	8.4e-45	151.9	0.0	1.3	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
DUF650	PF04894.7	gi|449067402|ref|YP_007434484.1|	-	2.1e-98	329.1	0.2	3.2e-98	328.5	0.0	1.4	2	0	0	2	2	2	1	Archaeal	protein	of	unknown	function	(DUF650)
DUF651	PF04895.7	gi|449067402|ref|YP_007434484.1|	-	4.8e-36	122.7	0.1	8.2e-36	121.9	0.0	1.4	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF651)
PHP_C	PF13263.1	gi|449067403|ref|YP_007434485.1|	-	5.2e-14	51.4	0.0	9.6e-14	50.6	0.0	1.5	1	0	0	1	1	1	1	PHP-associated
PHP	PF02811.14	gi|449067403|ref|YP_007434485.1|	-	2.2e-11	43.8	0.0	3.8e-11	43.1	0.0	1.5	1	1	0	1	1	1	1	PHP	domain
Semialdhyde_dh	PF01118.19	gi|449067404|ref|YP_007434486.1|	-	1.1e-32	112.8	0.0	1.9e-32	112.0	0.0	1.4	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Semialdhyde_dhC	PF02774.13	gi|449067404|ref|YP_007434486.1|	-	2.7e-26	92.5	0.1	3.9e-26	92.0	0.0	1.2	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
Gp_dh_C	PF02800.15	gi|449067404|ref|YP_007434486.1|	-	0.0027	17.1	0.1	0.0057	16.1	0.0	1.7	1	0	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
DapB_N	PF01113.15	gi|449067404|ref|YP_007434486.1|	-	0.0093	15.8	0.0	0.017	15.0	0.0	1.5	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
Ldh_1_N	PF00056.18	gi|449067404|ref|YP_007434486.1|	-	0.011	15.4	0.1	0.026	14.3	0.0	1.6	1	0	0	1	1	1	0	lactate/malate	dehydrogenase,	NAD	binding	domain
DXP_reductoisom	PF02670.11	gi|449067404|ref|YP_007434486.1|	-	0.018	15.5	0.1	0.11	12.9	0.0	2.3	3	0	0	3	3	3	0	1-deoxy-D-xylulose	5-phosphate	reductoisomerase
NAD_binding_10	PF13460.1	gi|449067404|ref|YP_007434486.1|	-	0.077	12.9	0.0	0.16	11.9	0.0	1.6	1	0	0	1	1	1	0	NADH(P)-binding
AA_kinase	PF00696.23	gi|449067405|ref|YP_007434487.1|	-	2.1e-44	151.8	1.7	3.1e-44	151.3	0.2	1.8	2	0	0	2	2	2	1	Amino	acid	kinase	family
ACT	PF01842.20	gi|449067405|ref|YP_007434487.1|	-	2.4e-05	23.6	0.9	0.0087	15.5	0.1	2.8	2	0	0	2	2	2	2	ACT	domain
PALP	PF00291.20	gi|449067406|ref|YP_007434488.1|	-	8.2e-71	238.7	0.2	9.9e-71	238.4	0.1	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
RecR	PF02132.10	gi|449067406|ref|YP_007434488.1|	-	0.051	13.0	0.1	0.18	11.2	0.0	1.9	2	0	0	2	2	2	0	RecR	protein
OrfB_Zn_ribbon	PF07282.6	gi|449067406|ref|YP_007434488.1|	-	0.068	12.8	0.2	0.13	11.9	0.2	1.5	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
Zn-ribbon_8	PF09723.5	gi|449067406|ref|YP_007434488.1|	-	0.1	12.5	0.1	0.22	11.4	0.1	1.5	1	0	0	1	1	1	0	Zinc	ribbon	domain
DNA_RNApol_7kD	PF03604.8	gi|449067406|ref|YP_007434488.1|	-	0.1	12.0	1.7	0.22	11.0	1.1	1.5	1	0	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
HypA	PF01155.14	gi|449067406|ref|YP_007434488.1|	-	0.14	11.8	0.1	0.21	11.2	0.1	1.3	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
Prok-RING_1	PF14446.1	gi|449067406|ref|YP_007434488.1|	-	0.17	11.6	0.5	0.27	10.9	0.3	1.3	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
zf-ribbon_3	PF13248.1	gi|449067406|ref|YP_007434488.1|	-	0.7	9.1	2.2	2.8	7.2	1.5	1.9	1	1	0	1	1	1	0	zinc-ribbon	domain
UbiD	PF01977.11	gi|449067407|ref|YP_007434489.1|	-	8.3e-133	442.7	0.0	9.7e-133	442.5	0.0	1.0	1	0	0	1	1	1	1	3-octaprenyl-4-hydroxybenzoate	carboxy-lyase
HMG-CoA_red	PF00368.13	gi|449067407|ref|YP_007434489.1|	-	0.12	11.0	0.0	0.17	10.4	0.0	1.1	1	0	0	1	1	1	0	Hydroxymethylglutaryl-coenzyme	A	reductase
Snf7	PF03357.16	gi|449067409|ref|YP_007434491.1|	-	0.00012	21.5	2.3	0.00019	20.8	1.6	1.5	1	1	0	1	1	1	1	Snf7
FHIPEP	PF00771.15	gi|449067409|ref|YP_007434491.1|	-	0.0032	15.8	1.1	0.0037	15.6	0.8	1.1	1	0	0	1	1	1	1	FHIPEP	family
Pox_F11	PF04943.7	gi|449067409|ref|YP_007434491.1|	-	0.019	13.8	0.2	0.02	13.8	0.1	1.2	1	0	0	1	1	1	0	Poxvirus	F11	protein
LOH1CR12	PF10158.4	gi|449067409|ref|YP_007434491.1|	-	0.028	14.2	0.2	0.055	13.2	0.1	1.5	1	0	0	1	1	1	0	Tumour	suppressor	protein
PPDK_N	PF01326.14	gi|449067410|ref|YP_007434492.1|	-	6.9e-102	340.8	0.0	1.3e-101	339.9	0.0	1.3	1	0	0	1	1	1	1	Pyruvate	phosphate	dikinase,	PEP/pyruvate	binding	domain
PEP-utilizers_C	PF02896.13	gi|449067410|ref|YP_007434492.1|	-	8.3e-81	271.0	0.0	1.5e-80	270.2	0.0	1.4	1	0	0	1	1	1	1	PEP-utilising	enzyme,	TIM	barrel	domain
PEP-utilizers	PF00391.18	gi|449067410|ref|YP_007434492.1|	-	4.6e-29	99.8	0.4	1.3e-28	98.3	0.2	1.9	1	0	0	1	1	1	1	PEP-utilising	enzyme,	mobile	domain
DUF384	PF04064.8	gi|449067410|ref|YP_007434492.1|	-	0.08	12.5	0.0	0.26	10.8	0.0	1.8	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF384)
UPF0147	PF03685.8	gi|449067410|ref|YP_007434492.1|	-	0.14	12.0	3.1	0.095	12.5	0.2	2.1	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0147)
NAD_binding_5	PF07994.7	gi|449067411|ref|YP_007434493.1|	-	3.7e-52	177.6	0.0	1.1e-51	176.1	0.0	1.6	1	1	0	1	1	1	1	Myo-inositol-1-phosphate	synthase
Inos-1-P_synth	PF01658.12	gi|449067411|ref|YP_007434493.1|	-	1.6e-29	101.9	0.0	3.2e-29	101.0	0.0	1.5	1	0	0	1	1	1	1	Myo-inositol-1-phosphate	synthase
Acylphosphatase	PF00708.13	gi|449067412|ref|YP_007434494.1|	-	4.3e-27	94.0	0.0	4.9e-27	93.8	0.0	1.0	1	0	0	1	1	1	1	Acylphosphatase
PALP	PF00291.20	gi|449067413|ref|YP_007434495.1|	-	2.2e-35	122.3	0.0	2.9e-35	121.9	0.0	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
Trp_syntA	PF00290.15	gi|449067414|ref|YP_007434496.1|	-	3.4e-38	130.6	0.7	4e-38	130.4	0.5	1.0	1	0	0	1	1	1	1	Tryptophan	synthase	alpha	chain
His_biosynth	PF00977.16	gi|449067414|ref|YP_007434496.1|	-	1.8e-05	24.1	0.3	3.5e-05	23.1	0.2	1.4	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
PcrB	PF01884.12	gi|449067414|ref|YP_007434496.1|	-	0.00028	20.2	1.0	0.00041	19.6	0.2	1.7	2	0	0	2	2	2	1	PcrB	family
TMP-TENI	PF02581.12	gi|449067414|ref|YP_007434496.1|	-	0.014	14.4	0.0	0.029	13.4	0.0	1.4	1	0	0	1	1	1	0	Thiamine	monophosphate	synthase/TENI
Ribul_P_3_epim	PF00834.14	gi|449067414|ref|YP_007434496.1|	-	0.016	14.2	0.0	0.022	13.8	0.0	1.3	1	0	0	1	1	1	0	Ribulose-phosphate	3	epimerase	family
FMN_dh	PF01070.13	gi|449067414|ref|YP_007434496.1|	-	0.022	13.5	0.1	0.032	13.0	0.1	1.2	1	0	0	1	1	1	0	FMN-dependent	dehydrogenase
NMO	PF03060.10	gi|449067414|ref|YP_007434496.1|	-	0.042	12.9	0.0	0.31	10.1	0.1	2.0	1	1	1	2	2	2	0	Nitronate	monooxygenase
IGPS	PF00218.16	gi|449067414|ref|YP_007434496.1|	-	0.058	12.4	0.1	0.11	11.4	0.1	1.4	1	0	0	1	1	1	0	Indole-3-glycerol	phosphate	synthase
GDPD_2	PF13653.1	gi|449067414|ref|YP_007434496.1|	-	0.14	12.3	0.0	0.4	10.9	0.0	1.7	1	0	0	1	1	1	0	Glycerophosphoryl	diester	phosphodiesterase	family
ThiG	PF05690.9	gi|449067414|ref|YP_007434496.1|	-	0.14	11.1	0.5	0.18	10.8	0.0	1.5	2	0	0	2	2	2	0	Thiazole	biosynthesis	protein	ThiG
Glycos_transf_3	PF00591.16	gi|449067415|ref|YP_007434497.1|	-	1e-75	254.3	0.0	1.4e-75	253.9	0.0	1.1	1	0	0	1	1	1	1	Glycosyl	transferase	family,	a/b	domain
Glycos_trans_3N	PF02885.12	gi|449067415|ref|YP_007434497.1|	-	1.5e-20	72.5	0.2	2.6e-20	71.7	0.2	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family,	helical	bundle	domain
PRAI	PF00697.17	gi|449067416|ref|YP_007434498.1|	-	1.3e-26	93.3	0.0	1.5e-26	93.1	0.0	1.0	1	0	0	1	1	1	1	N-(5'phosphoribosyl)anthranilate	(PRA)	isomerase
Chorismate_bind	PF00425.13	gi|449067417|ref|YP_007434499.1|	-	3.1e-90	302.0	0.0	3.7e-90	301.7	0.0	1.1	1	0	0	1	1	1	1	chorismate	binding	enzyme
Anth_synt_I_N	PF04715.8	gi|449067417|ref|YP_007434499.1|	-	1.3e-24	86.7	0.0	3.2e-24	85.5	0.0	1.7	1	0	0	1	1	1	1	Anthranilate	synthase	component	I,	N	terminal	region
GATase	PF00117.23	gi|449067418|ref|YP_007434500.1|	-	4.1e-49	166.6	0.0	4.6e-49	166.4	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|449067418|ref|YP_007434500.1|	-	1.9e-11	43.7	0.0	2.4e-11	43.4	0.0	1.3	1	0	0	1	1	1	1	Peptidase	C26
SNO	PF01174.14	gi|449067418|ref|YP_007434500.1|	-	0.041	13.5	0.0	0.054	13.1	0.0	1.5	1	1	0	1	1	1	0	SNO	glutamine	amidotransferase	family
Acetyltransf_7	PF13508.1	gi|449067418|ref|YP_007434500.1|	-	0.081	13.1	0.2	0.26	11.4	0.0	1.8	2	0	0	2	2	2	0	Acetyltransferase	(GNAT)	domain
IGPS	PF00218.16	gi|449067419|ref|YP_007434501.1|	-	4.8e-74	248.6	0.3	5.6e-74	248.4	0.2	1.0	1	0	0	1	1	1	1	Indole-3-glycerol	phosphate	synthase
His_biosynth	PF00977.16	gi|449067419|ref|YP_007434501.1|	-	2.2e-05	23.8	0.7	0.0025	17.1	0.0	2.2	1	1	1	2	2	2	2	Histidine	biosynthesis	protein
FMN_dh	PF01070.13	gi|449067419|ref|YP_007434501.1|	-	0.00022	20.1	0.0	0.2	10.4	0.0	2.1	2	0	0	2	2	2	2	FMN-dependent	dehydrogenase
ERF	PF04404.7	gi|449067419|ref|YP_007434501.1|	-	0.019	14.5	0.6	1.3	8.5	0.1	2.4	1	1	1	2	2	2	0	ERF	superfamily
QRPTase_C	PF01729.14	gi|449067419|ref|YP_007434501.1|	-	0.027	14.0	0.1	0.19	11.2	0.0	2.0	1	1	1	2	2	2	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
Aminotran_1_2	PF00155.16	gi|449067420|ref|YP_007434502.1|	-	3.9e-77	259.6	0.0	4.5e-77	259.4	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
DegT_DnrJ_EryC1	PF01041.12	gi|449067420|ref|YP_007434502.1|	-	1.2e-09	37.7	0.0	3e-09	36.4	0.0	1.6	2	0	0	2	2	2	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_5	PF00266.14	gi|449067420|ref|YP_007434502.1|	-	2.5e-07	29.7	0.0	8e-07	28.1	0.0	1.7	2	0	0	2	2	2	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.15	gi|449067420|ref|YP_007434502.1|	-	8.7e-06	24.2	0.0	1.6e-05	23.4	0.0	1.3	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Beta_elim_lyase	PF01212.16	gi|449067420|ref|YP_007434502.1|	-	1.8e-05	24.0	0.0	9.5e-05	21.6	0.0	1.9	2	0	0	2	2	2	1	Beta-eliminating	lyase
Radical_SAM	PF04055.16	gi|449067420|ref|YP_007434502.1|	-	0.0037	17.4	0.0	0.97	9.5	0.0	2.4	2	0	0	2	2	2	2	Radical	SAM	superfamily
OKR_DC_1	PF01276.15	gi|449067420|ref|YP_007434502.1|	-	0.025	13.1	0.1	0.063	11.8	0.0	1.6	2	0	0	2	2	2	0	Orn/Lys/Arg	decarboxylase,	major	domain
tRNA-synt_1	PF00133.17	gi|449067421|ref|YP_007434503.1|	-	1.6e-128	429.3	0.1	1.2e-127	426.4	0.0	2.2	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|449067421|ref|YP_007434503.1|	-	3.3e-31	108.0	1.8	6.7e-31	107.1	1.3	1.5	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.6	gi|449067421|ref|YP_007434503.1|	-	9.1e-27	93.6	0.2	3.5e-11	42.4	0.0	3.4	3	0	0	3	3	3	3	tRNA	synthetases	class	I	(M)
tRNA-synt_1_2	PF13603.1	gi|449067421|ref|YP_007434503.1|	-	8.6e-06	25.1	0.0	0.00025	20.4	0.0	2.7	1	1	2	3	3	3	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1d	PF00750.14	gi|449067421|ref|YP_007434503.1|	-	0.00044	19.1	0.0	0.082	11.6	0.0	2.8	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(R)
tRNA-synt_1e	PF01406.14	gi|449067421|ref|YP_007434503.1|	-	0.023	13.8	0.0	0.92	8.5	0.0	2.4	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(C)	catalytic	domain
zf-IS66	PF13005.2	gi|449067421|ref|YP_007434503.1|	-	2.4	8.1	4.2	14	5.7	0.1	2.6	2	0	0	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
NAD_binding_8	PF13450.1	gi|449067422|ref|YP_007434504.1|	-	0.001	19.0	0.0	0.002	18.0	0.0	1.5	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Trp_halogenase	PF04820.9	gi|449067422|ref|YP_007434504.1|	-	0.051	12.2	0.0	0.28	9.7	0.0	1.9	2	0	0	2	2	2	0	Tryptophan	halogenase
zf-H2C2_2	PF13465.1	gi|449067426|ref|YP_007434508.1|	-	0.00024	21.2	6.6	0.17	12.2	0.2	3.2	3	0	0	3	3	3	1	Zinc-finger	double	domain
Prok-RING_1	PF14446.1	gi|449067426|ref|YP_007434508.1|	-	0.00085	18.9	4.5	0.019	14.6	0.8	2.2	2	0	0	2	2	2	1	Prokaryotic	RING	finger	family	1
DZR	PF12773.2	gi|449067426|ref|YP_007434508.1|	-	0.0012	18.6	7.1	0.055	13.2	3.7	2.1	1	1	1	2	2	2	2	Double	zinc	ribbon
zf-RING_3	PF14369.1	gi|449067426|ref|YP_007434508.1|	-	0.0026	17.7	3.7	0.15	12.0	0.5	2.3	2	0	0	2	2	2	1	zinc-finger
Zn-ribbon_8	PF09723.5	gi|449067426|ref|YP_007434508.1|	-	0.0044	16.9	3.7	0.0044	16.9	2.5	1.8	2	0	0	2	2	1	1	Zinc	ribbon	domain
zf-tcix	PF14952.1	gi|449067426|ref|YP_007434508.1|	-	0.0053	16.0	4.6	0.034	13.4	0.1	2.4	2	0	0	2	2	2	1	Putative	treble-clef,	zinc-finger,	Zn-binding
zinc_ribbon_2	PF13240.1	gi|449067426|ref|YP_007434508.1|	-	0.009	15.4	12.0	0.042	13.3	0.3	3.2	3	0	0	3	3	3	1	zinc-ribbon	domain
Rep_fac-A_C	PF08646.5	gi|449067426|ref|YP_007434508.1|	-	0.013	15.1	2.5	0.018	14.7	1.7	1.2	1	0	0	1	1	1	0	Replication	factor-A	C	terminal	domain
zf-ribbon_3	PF13248.1	gi|449067426|ref|YP_007434508.1|	-	0.014	14.6	12.3	0.14	11.4	6.4	3.0	2	1	0	2	2	2	0	zinc-ribbon	domain
zf-C4_Topoisom	PF01396.14	gi|449067426|ref|YP_007434508.1|	-	0.016	14.6	5.4	0.5	9.9	0.1	2.8	3	0	0	3	3	3	0	Topoisomerase	DNA	binding	C4	zinc	finger
zf-C3HC4_3	PF13920.1	gi|449067426|ref|YP_007434508.1|	-	0.019	14.5	9.7	0.38	10.4	0.2	2.6	1	1	1	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
DUF1272	PF06906.6	gi|449067426|ref|YP_007434508.1|	-	0.027	14.3	7.1	0.13	12.1	4.9	2.1	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1272)
C1_3	PF07649.7	gi|449067426|ref|YP_007434508.1|	-	0.034	14.1	1.7	0.034	14.1	1.2	2.4	3	0	0	3	3	2	0	C1-like	domain
DNA_ligase_ZBD	PF03119.11	gi|449067426|ref|YP_007434508.1|	-	0.038	13.7	3.3	0.16	11.7	0.1	2.7	3	0	0	3	3	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-C2H2_4	PF13894.1	gi|449067426|ref|YP_007434508.1|	-	0.061	13.6	9.3	3.3	8.2	1.1	3.2	3	0	0	3	3	3	0	C2H2-type	zinc	finger
HypA	PF01155.14	gi|449067426|ref|YP_007434508.1|	-	0.066	12.9	4.9	0.95	9.1	3.4	2.0	1	1	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zf-TFIIB	PF13453.1	gi|449067426|ref|YP_007434508.1|	-	0.13	11.4	1.8	8.7	5.6	0.0	2.4	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
zf-CHCC	PF10276.4	gi|449067426|ref|YP_007434508.1|	-	0.17	11.7	0.5	0.17	11.7	0.3	2.3	2	0	0	2	2	2	0	Zinc-finger	domain
UPF0547	PF10571.4	gi|449067426|ref|YP_007434508.1|	-	0.2	11.4	0.1	0.2	11.4	0.1	2.9	3	0	0	3	3	3	0	Uncharacterised	protein	family	UPF0547
OrfB_Zn_ribbon	PF07282.6	gi|449067426|ref|YP_007434508.1|	-	0.2	11.3	6.1	0.49	10.0	1.0	2.1	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
Cys_rich_CPXG	PF14255.1	gi|449067426|ref|YP_007434508.1|	-	0.21	11.4	5.0	1.6	8.5	0.1	3.0	3	0	0	3	3	3	0	Cysteine-rich	CPXCG
zf-C3HC4_2	PF13923.1	gi|449067426|ref|YP_007434508.1|	-	0.25	11.4	6.6	1.9	8.5	0.8	2.3	2	0	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
zinc_ribbon_4	PF13717.1	gi|449067426|ref|YP_007434508.1|	-	0.25	11.0	11.2	0.43	10.3	5.1	2.6	2	1	0	2	2	2	0	zinc-ribbon	domain
zf-RING_2	PF13639.1	gi|449067426|ref|YP_007434508.1|	-	0.31	10.8	4.7	0.61	9.9	3.3	1.5	1	1	0	1	1	1	0	Ring	finger	domain
zf-B_box	PF00643.19	gi|449067426|ref|YP_007434508.1|	-	0.36	10.7	9.4	2	8.3	4.3	2.7	2	1	0	2	2	2	0	B-box	zinc	finger
zinc_ribbon_5	PF13719.1	gi|449067426|ref|YP_007434508.1|	-	0.4	10.2	11.0	0.7	9.5	5.0	2.6	2	1	0	2	2	2	0	zinc-ribbon	domain
TerY-C	PF15616.1	gi|449067426|ref|YP_007434508.1|	-	0.41	10.5	6.6	4.4	7.2	0.6	2.6	1	1	2	3	3	3	0	TerY-C	metal	binding	domain
zf-RING_4	PF14570.1	gi|449067426|ref|YP_007434508.1|	-	0.42	10.2	9.6	0.48	10.0	2.3	2.2	2	0	0	2	2	2	0	RING/Ubox	like	zinc-binding	domain
zf-AN1	PF01428.11	gi|449067426|ref|YP_007434508.1|	-	0.57	10.1	8.5	1.6	8.7	1.4	2.6	1	1	2	3	3	3	0	AN1-like	Zinc	finger
zf-Di19	PF05605.7	gi|449067426|ref|YP_007434508.1|	-	0.57	10.3	8.7	2.6	8.2	0.1	3.1	2	1	1	3	3	3	0	Drought	induced	19	protein	(Di19),	zinc-binding
zf-C2HC5	PF06221.8	gi|449067426|ref|YP_007434508.1|	-	0.72	9.6	6.8	0.57	9.9	2.2	2.2	1	1	1	2	2	2	0	Putative	zinc	finger	motif,	C2HC5-type
PhnA_Zn_Ribbon	PF08274.7	gi|449067426|ref|YP_007434508.1|	-	0.77	9.5	3.7	7.4	6.4	0.5	2.4	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
zf-LITAF-like	PF10601.4	gi|449067426|ref|YP_007434508.1|	-	0.77	9.6	8.2	5.4	6.9	0.1	3.0	1	1	2	3	3	3	0	LITAF-like	zinc	ribbon	domain
ADK_lid	PF05191.9	gi|449067426|ref|YP_007434508.1|	-	0.78	9.4	7.2	0.13	11.9	2.0	2.0	2	1	0	2	2	1	0	Adenylate	kinase,	active	site	lid
Sgf11	PF08209.6	gi|449067426|ref|YP_007434508.1|	-	0.78	9.1	8.5	4	6.8	0.5	3.1	3	0	0	3	3	3	0	Sgf11	(transcriptional	regulation	protein)
zf-IS66	PF13005.2	gi|449067426|ref|YP_007434508.1|	-	0.8	9.7	6.9	2.2	8.3	0.1	2.5	3	0	0	3	3	2	0	zinc-finger	binding	domain	of	transposase	IS66
Nop10p	PF04135.7	gi|449067426|ref|YP_007434508.1|	-	0.83	9.4	4.1	2	8.2	1.6	2.2	1	1	1	2	2	2	0	Nucleolar	RNA-binding	protein,	Nop10p	family
CpXC	PF14353.1	gi|449067426|ref|YP_007434508.1|	-	0.92	9.4	8.3	2.6	8.0	2.3	2.6	1	1	1	2	2	2	0	CpXC	protein
C1_2	PF03107.11	gi|449067426|ref|YP_007434508.1|	-	0.94	9.6	8.1	0.28	11.3	2.6	2.3	2	1	0	2	2	2	0	C1	domain
Lar_restr_allev	PF14354.1	gi|449067426|ref|YP_007434508.1|	-	1	9.6	9.6	3	8.1	4.0	2.3	1	1	1	2	2	2	0	Restriction	alleviation	protein	Lar
zf-C2H2	PF00096.21	gi|449067426|ref|YP_007434508.1|	-	1.1	9.7	12.3	2.6	8.5	1.1	3.2	3	0	0	3	3	3	0	Zinc	finger,	C2H2	type
zf-UBR	PF02207.15	gi|449067426|ref|YP_007434508.1|	-	1.1	8.9	6.7	0.73	9.5	3.4	1.7	1	1	0	1	1	1	0	Putative	zinc	finger	in	N-recognin	(UBR	box)
zf-RING_5	PF14634.1	gi|449067426|ref|YP_007434508.1|	-	1.2	8.9	11.2	3.3e+02	1.0	7.8	2.8	1	1	0	1	1	1	0	zinc-RING	finger	domain
DUF329	PF03884.9	gi|449067426|ref|YP_007434508.1|	-	1.2	8.7	9.1	8.5	6.0	0.8	3.0	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF329)
zf-MYND	PF01753.13	gi|449067426|ref|YP_007434508.1|	-	1.3	8.9	7.5	14	5.6	5.2	2.1	1	1	0	1	1	1	0	MYND	finger
Integrase_Zn	PF02022.14	gi|449067426|ref|YP_007434508.1|	-	1.4	8.4	3.6	4.3	6.8	0.0	2.6	3	0	0	3	3	2	0	Integrase	Zinc	binding	domain
C1_1	PF00130.17	gi|449067426|ref|YP_007434508.1|	-	1.5	8.6	6.7	1.1	9.0	1.4	2.1	1	1	1	2	2	2	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
zf-CHY	PF05495.7	gi|449067426|ref|YP_007434508.1|	-	1.5	9.0	7.8	0.49	10.5	1.2	2.2	1	1	1	2	2	2	0	CHY	zinc	finger
DUF4379	PF14311.1	gi|449067426|ref|YP_007434508.1|	-	2	8.2	6.1	1.3	8.9	3.1	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4379)
TFIIS_C	PF01096.13	gi|449067426|ref|YP_007434508.1|	-	2.2	7.9	9.3	1	9.0	0.4	2.7	3	0	0	3	3	3	0	Transcription	factor	S-II	(TFIIS)
zf-ISL3	PF14690.1	gi|449067426|ref|YP_007434508.1|	-	2.4	8.2	7.8	12	6.0	0.1	3.0	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
FYVE	PF01363.16	gi|449067426|ref|YP_007434508.1|	-	2.6	7.9	7.5	0.63	9.9	1.2	2.1	1	1	1	2	2	2	0	FYVE	zinc	finger
DUF581	PF04570.9	gi|449067426|ref|YP_007434508.1|	-	3.4	7.0	7.5	3.2	7.0	2.5	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF581)
TF_Zn_Ribbon	PF08271.7	gi|449067426|ref|YP_007434508.1|	-	3.4	7.0	10.7	2.8	7.3	0.2	2.8	3	0	0	3	3	3	0	TFIIB	zinc-binding
DUF4428	PF14471.1	gi|449067426|ref|YP_007434508.1|	-	3.7	7.3	7.4	1.9	8.2	2.2	2.4	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4428)
zf-BED	PF02892.10	gi|449067426|ref|YP_007434508.1|	-	3.9	7.3	14.6	1.9	8.2	0.5	3.1	1	1	2	3	3	3	0	BED	zinc	finger
Ribosomal_S27e	PF01667.12	gi|449067426|ref|YP_007434508.1|	-	4.3	6.9	8.4	31	4.2	3.7	2.8	2	1	0	2	2	2	0	Ribosomal	protein	S27
Ogr_Delta	PF04606.7	gi|449067426|ref|YP_007434508.1|	-	4.3	7.0	6.8	29	4.3	0.1	3.2	3	0	0	3	3	3	0	Ogr/Delta-like	zinc	finger
zf-C3HC4	PF00097.20	gi|449067426|ref|YP_007434508.1|	-	4.6	6.9	7.7	3.8	7.2	1.7	2.3	2	0	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
Mu-like_Com	PF10122.4	gi|449067426|ref|YP_007434508.1|	-	5.9	6.0	10.5	4.7	6.3	0.3	2.3	1	1	1	2	2	2	0	Mu-like	prophage	protein	Com
DUF2072	PF09845.4	gi|449067426|ref|YP_007434508.1|	-	6.5	6.6	7.7	6.6	6.6	1.8	1.9	1	1	1	2	2	2	0	Zn-ribbon	containing	protein	(DUF2072)
Zn_Tnp_IS1595	PF12760.2	gi|449067426|ref|YP_007434508.1|	-	6.6	6.6	10.5	15	5.4	0.3	2.5	1	1	2	3	3	3	0	Transposase	zinc-ribbon	domain
zf-C2HC_2	PF13913.1	gi|449067426|ref|YP_007434508.1|	-	7.7	6.3	17.3	6.1	6.6	0.6	3.2	3	0	0	3	3	3	0	zinc-finger	of	a	C2HC-type
zf-HIT	PF04438.11	gi|449067426|ref|YP_007434508.1|	-	8.7	6.0	16.7	41	3.9	0.2	3.0	2	1	0	2	2	2	0	HIT	zinc	finger
zf-Mss51	PF13824.1	gi|449067426|ref|YP_007434508.1|	-	8.8	6.2	6.3	4e+02	0.9	4.9	2.7	2	1	0	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
DUF1953	PF09196.5	gi|449067427|ref|YP_007434509.1|	-	7.1e-40	134.5	2.5	2.8e-39	132.6	1.7	2.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1953)
Alpha-amylase	PF00128.19	gi|449067427|ref|YP_007434509.1|	-	9.9e-27	94.1	9.3	1.5e-23	83.7	1.7	3.2	2	1	0	2	2	2	2	Alpha	amylase,	catalytic	domain
GIY-YIG	PF01541.19	gi|449067427|ref|YP_007434509.1|	-	0.0024	18.2	2.4	0.012	15.9	1.7	2.2	1	0	0	1	1	1	1	GIY-YIG	catalytic	domain
Alpha-amylase	PF00128.19	gi|449067428|ref|YP_007434510.1|	-	5.7e-21	75.2	0.1	2.8e-19	69.6	0.0	2.8	1	1	0	1	1	1	1	Alpha	amylase,	catalytic	domain
CBM_48	PF02922.13	gi|449067428|ref|YP_007434510.1|	-	3.4e-20	71.8	0.0	1.7e-19	69.6	0.0	2.2	2	0	0	2	2	2	1	Carbohydrate-binding	module	48	(Isoamylase	N-terminal	domain)
Glyco_hydro_31	PF01055.21	gi|449067428|ref|YP_007434510.1|	-	0.022	13.5	0.0	0.059	12.1	0.0	1.6	1	1	1	2	2	2	0	Glycosyl	hydrolases	family	31
Alpha-amylase	PF00128.19	gi|449067429|ref|YP_007434511.1|	-	6.6e-37	127.5	2.2	1.6e-24	86.9	0.1	3.0	1	1	0	2	2	2	2	Alpha	amylase,	catalytic	domain
Alpha-amyl_C	PF09071.5	gi|449067429|ref|YP_007434511.1|	-	3.7e-27	93.8	0.9	8.1e-27	92.7	0.6	1.6	1	0	0	1	1	1	1	Alpha-amylase,	C	terminal
CBM_48	PF02922.13	gi|449067429|ref|YP_007434511.1|	-	2.1e-07	30.9	0.0	4.1e-07	29.9	0.0	1.5	1	0	0	1	1	1	1	Carbohydrate-binding	module	48	(Isoamylase	N-terminal	domain)
Phage_integrase	PF00589.17	gi|449067430|ref|YP_007434512.1|	-	0.011	15.3	0.1	2.6	7.6	0.0	2.3	1	1	1	2	2	2	0	Phage	integrase	family
Cation_ATPase_C	PF00689.16	gi|449067432|ref|YP_007434514.1|	-	8.9	5.7	15.1	0.31	10.5	5.8	1.9	1	1	1	2	2	2	0	Cation	transporting	ATPase,	C-terminus
DDE_Tnp_IS66	PF03050.9	gi|449067433|ref|YP_007434515.1|	-	0.00089	18.5	0.0	0.0012	18.1	0.0	1.1	1	0	0	1	1	1	1	Transposase	IS66	family
DDE_Tnp_IS240	PF13610.1	gi|449067433|ref|YP_007434515.1|	-	0.14	12.1	0.0	0.18	11.7	0.0	1.2	1	0	0	1	1	1	0	DDE	domain
DUF1947	PF09183.5	gi|449067434|ref|YP_007434516.1|	-	0.018	14.7	1.1	2.9	7.7	0.0	2.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1947)
AAA_14	PF13173.1	gi|449067436|ref|YP_007434518.1|	-	9.4e-28	96.6	0.9	2e-27	95.6	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
DUF4143	PF13635.1	gi|449067436|ref|YP_007434518.1|	-	7.6e-12	45.2	0.0	1.6e-11	44.2	0.0	1.5	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
Arch_ATPase	PF01637.13	gi|449067436|ref|YP_007434518.1|	-	1.3e-06	28.2	0.7	0.00016	21.4	0.1	2.6	1	1	1	2	2	2	1	Archaeal	ATPase
AAA_16	PF13191.1	gi|449067436|ref|YP_007434518.1|	-	9.3e-05	22.4	0.0	0.00017	21.6	0.0	1.4	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA	PF00004.24	gi|449067436|ref|YP_007434518.1|	-	0.0093	16.1	0.0	0.021	15.0	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_18	PF13238.1	gi|449067436|ref|YP_007434518.1|	-	0.013	15.8	0.1	0.082	13.2	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
MobB	PF03205.9	gi|449067436|ref|YP_007434518.1|	-	0.017	14.8	0.1	0.044	13.4	0.0	1.7	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
RNA_helicase	PF00910.17	gi|449067436|ref|YP_007434518.1|	-	0.024	14.7	0.0	0.076	13.1	0.0	1.9	2	0	0	2	2	2	0	RNA	helicase
AAA_17	PF13207.1	gi|449067436|ref|YP_007434518.1|	-	0.061	14.1	0.7	0.48	11.2	0.1	2.8	2	1	0	2	2	2	0	AAA	domain
AAA_22	PF13401.1	gi|449067436|ref|YP_007434518.1|	-	0.063	13.4	0.0	0.16	12.1	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
NTPase_1	PF03266.10	gi|449067436|ref|YP_007434518.1|	-	0.18	11.5	0.8	0.6	9.8	0.1	2.2	3	0	0	3	3	3	0	NTPase
Antitoxin-MazE	PF04014.13	gi|449067437|ref|YP_007434519.1|	-	2.9e-06	26.8	0.9	4.4e-06	26.2	0.2	1.7	2	0	0	2	2	2	1	Antidote-toxin	recognition	MazE
MraZ	PF02381.13	gi|449067437|ref|YP_007434519.1|	-	0.0015	18.2	0.0	0.0035	17.0	0.0	1.6	1	0	0	1	1	1	1	MraZ	protein
GrpE	PF01025.14	gi|449067437|ref|YP_007434519.1|	-	0.0029	17.1	1.1	0.004	16.7	0.7	1.2	1	0	0	1	1	1	1	GrpE
IncA	PF04156.9	gi|449067437|ref|YP_007434519.1|	-	0.0035	16.9	0.8	0.0035	16.9	0.5	1.1	1	0	0	1	1	1	1	IncA	protein
bZIP_1	PF00170.16	gi|449067437|ref|YP_007434519.1|	-	0.0068	16.3	1.2	0.0068	16.3	0.8	1.6	2	0	0	2	2	2	1	bZIP	transcription	factor
Corona_NS3b	PF03053.9	gi|449067437|ref|YP_007434519.1|	-	0.026	14.0	0.0	0.031	13.8	0.0	1.1	1	0	0	1	1	1	0	ORF3b	coronavirus	protein
Nbl1_Borealin_N	PF10444.4	gi|449067437|ref|YP_007434519.1|	-	0.054	12.8	0.9	0.11	11.8	0.1	1.9	2	1	1	3	3	3	0	Nbl1	/	Borealin	N	terminal
bZIP_2	PF07716.10	gi|449067437|ref|YP_007434519.1|	-	0.12	12.1	2.3	0.22	11.3	1.6	1.4	1	0	0	1	1	1	0	Basic	region	leucine	zipper
Paralemmin	PF03285.10	gi|449067437|ref|YP_007434519.1|	-	0.29	10.5	1.3	0.37	10.2	0.9	1.2	1	0	0	1	1	1	0	Paralemmin
TMF_DNA_bd	PF12329.3	gi|449067437|ref|YP_007434519.1|	-	0.3	10.9	3.3	0.31	10.8	1.3	1.7	1	1	0	1	1	1	0	TATA	element	modulatory	factor	1	DNA	binding
DUF104	PF01954.11	gi|449067437|ref|YP_007434519.1|	-	2.4	8.2	8.7	2	8.5	1.9	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	DUF104
M	PF02370.11	gi|449067437|ref|YP_007434519.1|	-	6.8	7.4	6.7	3.1	8.4	1.9	2.4	2	0	0	2	2	2	0	M	protein	repeat
DUF2203	PF09969.4	gi|449067438|ref|YP_007434520.1|	-	3.5	7.8	8.3	2.2	8.5	0.1	3.5	3	2	1	4	4	4	0	Uncharacterized	conserved	protein	(DUF2203)
PmbA_TldD	PF01523.11	gi|449067439|ref|YP_007434521.1|	-	0.0019	17.5	0.5	0.0023	17.2	0.3	1.2	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
F_actin_bind	PF08919.5	gi|449067439|ref|YP_007434521.1|	-	0.029	14.0	0.4	0.06	13.0	0.2	1.7	1	1	0	1	1	1	0	F-actin	binding
DUF4446	PF14584.1	gi|449067439|ref|YP_007434521.1|	-	0.052	13.3	0.4	0.073	12.9	0.3	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4446)
ATP-cone	PF03477.11	gi|449067439|ref|YP_007434521.1|	-	0.1	13.0	1.7	0.14	12.6	1.2	1.2	1	0	0	1	1	1	0	ATP	cone	domain
SPOB_ab	PF14682.1	gi|449067439|ref|YP_007434521.1|	-	0.13	12.0	1.8	0.28	10.9	0.4	1.9	1	1	1	2	2	2	0	Sporulation	initiation	phospho-transferase	B,	C-terminal
CaM_binding	PF07839.6	gi|449067439|ref|YP_007434521.1|	-	0.13	12.4	3.5	0.25	11.5	2.4	1.5	1	1	0	1	1	1	0	Plant	calmodulin-binding	domain
DUF4504	PF14953.1	gi|449067439|ref|YP_007434521.1|	-	0.22	10.7	2.6	2.5	7.3	0.5	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4504)
Phage_connect_1	PF05135.8	gi|449067439|ref|YP_007434521.1|	-	0.23	11.6	4.4	1.1	9.4	3.0	1.9	1	1	0	1	1	1	0	Phage	gp6-like	head-tail	connector	protein
Prominin	PF05478.6	gi|449067439|ref|YP_007434521.1|	-	0.37	8.2	3.4	0.41	8.1	2.3	1.0	1	0	0	1	1	1	0	Prominin
IncA	PF04156.9	gi|449067439|ref|YP_007434521.1|	-	0.5	9.9	7.7	0.57	9.7	5.4	1.1	1	0	0	1	1	1	0	IncA	protein
TSC22	PF01166.13	gi|449067439|ref|YP_007434521.1|	-	0.85	9.6	11.4	0.26	11.2	0.5	2.9	1	1	2	3	3	3	0	TSC-22/dip/bun	family
DUF1635	PF07795.6	gi|449067439|ref|YP_007434521.1|	-	5.9	6.1	9.0	2.7	7.3	4.3	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1635)
DUF434	PF04256.7	gi|449067440|ref|YP_007434522.1|	-	4e-24	83.7	2.0	7.2e-24	82.9	1.4	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF434)
tRNA-synt_2c	PF01411.14	gi|449067441|ref|YP_007434523.1|	-	5.4e-115	384.7	0.0	7.6e-115	384.2	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(A)
tRNA_SAD	PF07973.9	gi|449067441|ref|YP_007434523.1|	-	1.5e-11	43.9	0.9	3.6e-11	42.7	0.6	1.7	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
tRNA-synt_2e	PF02091.10	gi|449067441|ref|YP_007434523.1|	-	0.00042	19.5	0.2	0.0011	18.1	0.0	1.7	2	0	0	2	2	2	1	Glycyl-tRNA	synthetase	alpha	subunit
DHHA1	PF02272.14	gi|449067441|ref|YP_007434523.1|	-	0.0038	16.8	0.2	0.01	15.4	0.1	1.7	1	0	0	1	1	1	1	DHHA1	domain
Ribosomal_60s	PF00428.14	gi|449067442|ref|YP_007434524.1|	-	2.5e-20	72.6	11.1	2.9e-20	72.4	7.7	1.1	1	0	0	1	1	1	1	60s	Acidic	ribosomal	protein
PepSY_2	PF13670.1	gi|449067442|ref|YP_007434524.1|	-	0.0091	15.8	2.1	1.3	8.9	0.0	2.2	2	0	0	2	2	2	2	Peptidase	propeptide	and	YPEB	domain
Ribosomal_L10	PF00466.15	gi|449067443|ref|YP_007434525.1|	-	1.2e-26	92.5	0.5	2.7e-26	91.3	0.3	1.6	1	0	0	1	1	1	1	Ribosomal	protein	L10
Ribosomal_60s	PF00428.14	gi|449067443|ref|YP_007434525.1|	-	0.54	10.7	12.4	1.8	9.0	8.6	2.1	1	1	0	1	1	1	0	60s	Acidic	ribosomal	protein
Ribosomal_L1	PF00687.16	gi|449067444|ref|YP_007434526.1|	-	8.5e-40	136.4	2.4	1e-39	136.1	1.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L1p/L10e	family
DUF3670	PF12419.3	gi|449067444|ref|YP_007434526.1|	-	0.07	12.5	0.0	0.17	11.3	0.0	1.6	1	0	0	1	1	1	0	SNF2	Helicase	protein
Ribosomal_L11_N	PF03946.9	gi|449067445|ref|YP_007434527.1|	-	1.5e-22	78.7	0.9	3.1e-22	77.7	0.7	1.6	1	0	0	1	1	1	1	Ribosomal	protein	L11,	N-terminal	domain
Ribosomal_L11	PF00298.14	gi|449067445|ref|YP_007434527.1|	-	2.7e-21	75.4	1.0	2.7e-21	75.4	0.7	2.0	3	0	0	3	3	3	1	Ribosomal	protein	L11,	RNA	binding	domain
Flagellin_IN	PF07196.8	gi|449067445|ref|YP_007434527.1|	-	0.073	13.0	1.3	6.4	6.8	0.0	2.8	3	0	0	3	3	3	0	Flagellin	hook	IN	motif
Spt5-NGN	PF03439.8	gi|449067446|ref|YP_007434528.1|	-	6.2e-22	77.1	0.8	6.5e-21	73.8	0.1	2.0	2	0	0	2	2	2	1	Early	transcription	elongation	factor	of	RNA	pol	II,	NGN	section
KOW	PF00467.24	gi|449067446|ref|YP_007434528.1|	-	4.8e-07	29.2	0.1	1.2e-06	27.9	0.0	1.7	1	0	0	1	1	1	1	KOW	motif
NusG	PF02357.14	gi|449067446|ref|YP_007434528.1|	-	0.0001	22.4	1.8	0.0007	19.7	0.0	2.3	2	1	0	2	2	2	1	Transcription	termination	factor	nusG
PalH	PF08733.5	gi|449067447|ref|YP_007434529.1|	-	0.0019	17.1	0.1	0.0021	16.9	0.0	1.0	1	0	0	1	1	1	1	PalH/RIM21
Lambda_CIII	PF02061.11	gi|449067447|ref|YP_007434529.1|	-	0.068	13.1	0.6	0.16	11.9	0.2	1.7	2	0	0	2	2	2	0	Lambda	Phage	CIII
P4Ha_N	PF08336.6	gi|449067447|ref|YP_007434529.1|	-	0.083	12.7	0.1	0.1	12.3	0.0	1.2	1	0	0	1	1	1	0	Prolyl	4-Hydroxylase	alpha-subunit,	N-terminal	region
SRP54	PF00448.17	gi|449067448|ref|YP_007434530.1|	-	3.6e-74	248.4	0.0	4e-74	248.3	0.0	1.0	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
cobW	PF02492.14	gi|449067448|ref|YP_007434530.1|	-	2.3e-07	30.4	0.1	2.9e-07	30.1	0.1	1.1	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
NTPase_1	PF03266.10	gi|449067448|ref|YP_007434530.1|	-	1.7e-05	24.6	1.1	0.0051	16.5	0.7	2.2	1	1	0	1	1	1	1	NTPase
AAA_22	PF13401.1	gi|449067448|ref|YP_007434530.1|	-	2.4e-05	24.4	0.0	3.9e-05	23.7	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
MobB	PF03205.9	gi|449067448|ref|YP_007434530.1|	-	5.6e-05	22.8	0.9	0.0001	22.0	0.6	1.6	1	1	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_30	PF13604.1	gi|449067448|ref|YP_007434530.1|	-	6.4e-05	22.6	0.0	7.4e-05	22.4	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|449067448|ref|YP_007434530.1|	-	0.0005	20.2	0.3	0.00096	19.3	0.2	1.8	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_33	PF13671.1	gi|449067448|ref|YP_007434530.1|	-	0.0013	18.5	0.0	0.0018	18.1	0.0	1.3	1	1	0	1	1	1	1	AAA	domain
DUF2075	PF09848.4	gi|449067448|ref|YP_007434530.1|	-	0.0016	17.4	0.0	0.002	17.1	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
Arch_ATPase	PF01637.13	gi|449067448|ref|YP_007434530.1|	-	0.0044	16.7	0.0	0.0054	16.4	0.0	1.3	1	0	0	1	1	1	1	Archaeal	ATPase
AAA_16	PF13191.1	gi|449067448|ref|YP_007434530.1|	-	0.0054	16.7	0.0	0.0082	16.1	0.0	1.3	1	0	0	1	1	1	1	AAA	ATPase	domain
NB-ARC	PF00931.17	gi|449067448|ref|YP_007434530.1|	-	0.0057	15.5	0.0	0.0083	15.0	0.0	1.3	1	0	0	1	1	1	1	NB-ARC	domain
MMR_HSR1	PF01926.18	gi|449067448|ref|YP_007434530.1|	-	0.007	16.3	0.1	0.011	15.6	0.0	1.4	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
ArgK	PF03308.11	gi|449067448|ref|YP_007434530.1|	-	0.007	15.1	0.1	0.36	9.5	0.1	2.3	2	0	0	2	2	2	1	ArgK	protein
AAA_14	PF13173.1	gi|449067448|ref|YP_007434530.1|	-	0.0071	16.2	0.0	0.012	15.5	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
APS_kinase	PF01583.15	gi|449067448|ref|YP_007434530.1|	-	0.0081	15.8	0.0	0.016	14.9	0.0	1.5	1	0	0	1	1	1	1	Adenylylsulphate	kinase
AAA_19	PF13245.1	gi|449067448|ref|YP_007434530.1|	-	0.009	15.7	0.1	0.046	13.4	0.1	2.0	2	1	1	3	3	3	1	Part	of	AAA	domain
Zeta_toxin	PF06414.7	gi|449067448|ref|YP_007434530.1|	-	0.0093	15.0	0.0	0.063	12.3	0.0	1.9	2	0	0	2	2	2	1	Zeta	toxin
CbiA	PF01656.18	gi|449067448|ref|YP_007434530.1|	-	0.013	14.9	3.1	0.12	11.7	2.1	2.4	1	1	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
KTI12	PF08433.5	gi|449067448|ref|YP_007434530.1|	-	0.014	14.6	0.0	0.02	14.0	0.0	1.2	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
Thymidylate_kin	PF02223.12	gi|449067448|ref|YP_007434530.1|	-	0.014	14.7	0.0	0.097	12.0	0.0	2.0	2	0	0	2	2	2	0	Thymidylate	kinase
AAA_17	PF13207.1	gi|449067448|ref|YP_007434530.1|	-	0.023	15.4	0.7	0.11	13.3	0.5	2.0	1	1	0	1	1	1	0	AAA	domain
GTP_EFTU	PF00009.22	gi|449067448|ref|YP_007434530.1|	-	0.026	13.9	0.1	0.033	13.6	0.0	1.2	1	0	0	1	1	1	0	Elongation	factor	Tu	GTP	binding	domain
NACHT	PF05729.7	gi|449067448|ref|YP_007434530.1|	-	0.038	13.6	0.1	0.12	12.0	0.0	1.8	2	0	0	2	2	2	0	NACHT	domain
T2SE	PF00437.15	gi|449067448|ref|YP_007434530.1|	-	0.049	12.5	0.1	0.088	11.6	0.1	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
Arf	PF00025.16	gi|449067448|ref|YP_007434530.1|	-	0.052	12.7	0.1	0.1	11.8	0.1	1.5	1	1	0	1	1	1	0	ADP-ribosylation	factor	family
PPK2	PF03976.9	gi|449067448|ref|YP_007434530.1|	-	0.06	12.6	0.0	0.22	10.7	0.0	1.8	2	0	0	2	2	2	0	Polyphosphate	kinase	2	(PPK2)
KAP_NTPase	PF07693.9	gi|449067448|ref|YP_007434530.1|	-	0.061	12.3	0.0	0.073	12.0	0.0	1.1	1	0	0	1	1	1	0	KAP	family	P-loop	domain
Viral_helicase1	PF01443.13	gi|449067448|ref|YP_007434530.1|	-	0.062	12.8	0.0	0.11	12.0	0.0	1.4	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
AAA_28	PF13521.1	gi|449067448|ref|YP_007434530.1|	-	0.095	12.6	0.0	0.24	11.3	0.0	1.7	2	1	0	2	2	2	0	AAA	domain
Miro	PF08477.8	gi|449067448|ref|YP_007434530.1|	-	0.12	12.9	0.1	0.21	12.0	0.1	1.6	1	1	0	1	1	1	0	Miro-like	protein
PhoH	PF02562.11	gi|449067448|ref|YP_007434530.1|	-	0.12	11.6	0.1	0.17	11.1	0.1	1.2	1	0	0	1	1	1	0	PhoH-like	protein
AAA_18	PF13238.1	gi|449067448|ref|YP_007434530.1|	-	0.12	12.7	0.4	0.26	11.5	0.3	1.8	1	1	0	1	1	1	0	AAA	domain
AAA_11	PF13086.1	gi|449067448|ref|YP_007434530.1|	-	0.12	11.9	0.2	0.36	10.3	0.1	1.8	1	1	0	1	1	1	0	AAA	domain
DUF2855	PF11017.3	gi|449067448|ref|YP_007434530.1|	-	0.13	11.4	0.1	0.27	10.3	0.0	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2855)
Prefoldin	PF02996.12	gi|449067449|ref|YP_007434531.1|	-	1.6e-26	92.3	4.3	1.6e-26	92.3	3.0	1.3	2	0	0	2	2	2	1	Prefoldin	subunit
Sec8_exocyst	PF04048.9	gi|449067449|ref|YP_007434531.1|	-	0.027	14.1	1.3	0.12	12.0	0.1	2.0	2	0	0	2	2	2	0	Sec8	exocyst	complex	component	specific	domain
NPV_P10	PF05531.7	gi|449067449|ref|YP_007434531.1|	-	0.049	13.8	2.5	1.4	9.2	0.1	2.3	2	0	0	2	2	2	0	Nucleopolyhedrovirus	P10	protein
ChuX_HutX	PF06228.8	gi|449067449|ref|YP_007434531.1|	-	0.075	12.4	0.2	3.6	6.9	0.0	2.3	2	1	0	2	2	2	0	Haem	utilisation	ChuX/HutX
CENP-Q	PF13094.1	gi|449067449|ref|YP_007434531.1|	-	0.1	12.6	5.3	0.27	11.2	3.7	1.7	1	1	0	1	1	1	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
HHH_6	PF14579.1	gi|449067449|ref|YP_007434531.1|	-	0.11	12.5	0.1	0.36	10.9	0.0	2.0	1	1	0	1	1	1	0	Helix-hairpin-helix	motif
DUF3508	PF12018.3	gi|449067449|ref|YP_007434531.1|	-	0.24	10.3	2.1	0.56	9.1	0.3	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3508)
Prefoldin_2	PF01920.15	gi|449067449|ref|YP_007434531.1|	-	0.48	10.1	6.4	2.2	8.0	0.4	2.3	2	0	0	2	2	2	0	Prefoldin	subunit
Plasmid_stabil	PF05016.9	gi|449067449|ref|YP_007434531.1|	-	0.49	10.8	3.5	1.6	9.1	0.4	2.2	1	1	1	2	2	2	0	Plasmid	stabilisation	system	protein
DUF148	PF02520.12	gi|449067449|ref|YP_007434531.1|	-	0.63	9.8	6.4	6.2	6.6	0.8	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF148
Occludin_ELL	PF07303.8	gi|449067449|ref|YP_007434531.1|	-	0.65	10.7	4.9	4.6	8.0	0.6	2.1	2	0	0	2	2	2	0	Occludin	homology	domain
CorA	PF01544.13	gi|449067449|ref|YP_007434531.1|	-	0.71	8.8	5.5	1	8.3	0.7	2.0	1	1	1	2	2	2	0	CorA-like	Mg2+	transporter	protein
Nsp1_C	PF05064.8	gi|449067449|ref|YP_007434531.1|	-	0.71	9.5	7.0	6	6.5	0.3	2.2	2	0	0	2	2	2	0	Nsp1-like	C-terminal	region
DUF4164	PF13747.1	gi|449067449|ref|YP_007434531.1|	-	0.88	9.7	4.1	6.7	6.9	0.7	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4164)
Ribosomal_L18ae	PF01775.12	gi|449067450|ref|YP_007434532.1|	-	1.2e-10	41.3	0.8	2.4e-10	40.3	0.5	1.6	1	1	0	1	1	1	1	Ribosomal	L18ae/LX	protein	domain
IL31	PF15209.1	gi|449067450|ref|YP_007434532.1|	-	0.15	11.6	1.0	1.1	8.9	0.3	1.9	1	1	1	2	2	2	0	Interleukin	31
eIF-6	PF01912.13	gi|449067451|ref|YP_007434533.1|	-	9.4e-67	223.9	9.4	1.2e-66	223.6	6.5	1.1	1	0	0	1	1	1	1	eIF-6	family
PNK3P	PF08645.6	gi|449067451|ref|YP_007434533.1|	-	0.19	11.1	1.8	0.19	11.1	0.3	1.7	2	0	0	2	2	2	0	Polynucleotide	kinase	3	phosphatase
Ribosomal_L31e	PF01198.14	gi|449067452|ref|YP_007434534.1|	-	1.8e-11	43.5	3.3	3.3e-11	42.6	2.3	1.4	1	0	0	1	1	1	1	Ribosomal	protein	L31e
DTHCT	PF08070.6	gi|449067452|ref|YP_007434534.1|	-	0.042	14.5	5.3	0.061	13.9	3.7	1.2	1	0	0	1	1	1	0	DTHCT	(NUC029)	region
ST7	PF04184.7	gi|449067452|ref|YP_007434534.1|	-	0.05	11.8	2.4	0.06	11.5	1.7	1.0	1	0	0	1	1	1	0	ST7	protein
ACCA	PF03255.9	gi|449067452|ref|YP_007434534.1|	-	0.088	12.3	4.4	0.13	11.8	3.0	1.2	1	0	0	1	1	1	0	Acetyl	co-enzyme	A	carboxylase	carboxyltransferase	alpha	subunit
PTPlike_phytase	PF14566.1	gi|449067452|ref|YP_007434534.1|	-	0.36	10.8	4.1	0.44	10.5	2.8	1.2	1	0	0	1	1	1	0	Inositol	hexakisphosphate
Peptidase_S49_N	PF08496.5	gi|449067452|ref|YP_007434534.1|	-	0.41	10.4	7.0	0.53	10.0	4.8	1.2	1	0	0	1	1	1	0	Peptidase	family	S49	N-terminal
GAGA_bind	PF06217.7	gi|449067452|ref|YP_007434534.1|	-	0.86	9.5	7.9	1.1	9.1	5.5	1.1	1	0	0	1	1	1	0	GAGA	binding	protein-like	family
DUF913	PF06025.7	gi|449067452|ref|YP_007434534.1|	-	1.1	7.9	3.4	1.5	7.4	2.3	1.2	1	0	0	1	1	1	0	Domain	of	Unknown	Function	(DUF913)
HGTP_anticodon2	PF12745.2	gi|449067452|ref|YP_007434534.1|	-	1.2	8.2	6.9	1.4	8.0	4.8	1.0	1	0	0	1	1	1	0	Anticodon	binding	domain	of	tRNAs
YqfQ	PF14181.1	gi|449067452|ref|YP_007434534.1|	-	7.4	6.5	12.0	9.6	6.2	8.4	1.2	1	0	0	1	1	1	0	YqfQ-like	protein
RR_TM4-6	PF06459.7	gi|449067452|ref|YP_007434534.1|	-	7.8	6.2	10.2	9	6.1	7.1	1.1	1	0	0	1	1	1	0	Ryanodine	Receptor	TM	4-6
AIF_C	PF14721.1	gi|449067452|ref|YP_007434534.1|	-	7.8	6.7	6.5	11	6.2	4.5	1.3	1	0	0	1	1	1	0	Apoptosis-inducing	factor,	mitochondrion-associated,	C-term
Ribosomal_L39	PF00832.15	gi|449067453|ref|YP_007434535.1|	-	3e-21	74.5	6.7	3.6e-21	74.3	4.7	1.1	1	0	0	1	1	1	1	Ribosomal	L39	protein
REV	PF00424.13	gi|449067453|ref|YP_007434535.1|	-	0.074	12.9	0.8	0.079	12.8	0.6	1.1	1	0	0	1	1	1	0	REV	protein	(anti-repression	trans-activator	protein)
dsDNA_bind	PF01984.15	gi|449067454|ref|YP_007434536.1|	-	4.6e-30	103.7	12.9	5.2e-30	103.6	8.9	1.0	1	0	0	1	1	1	1	Double-stranded	DNA-binding	domain
4HB_MCP_1	PF12729.2	gi|449067454|ref|YP_007434536.1|	-	0.0049	16.2	4.3	0.0052	16.1	3.0	1.0	1	0	0	1	1	1	1	Four	helix	bundle	sensory	module	for	signal	transduction
YopR_core	PF09025.5	gi|449067454|ref|YP_007434536.1|	-	0.091	12.7	2.3	0.1	12.5	1.6	1.1	1	0	0	1	1	1	0	YopR	Core
Caps_synth_GfcC	PF06251.6	gi|449067454|ref|YP_007434536.1|	-	0.39	9.8	4.7	0.45	9.6	3.3	1.0	1	0	0	1	1	1	0	Capsule	biosynthesis	GfcC
Ribosomal_S19e	PF01090.14	gi|449067455|ref|YP_007434537.1|	-	3.9e-51	172.1	0.0	4.5e-51	171.9	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S19e
HTH_12	PF08461.5	gi|449067455|ref|YP_007434537.1|	-	0.0095	15.6	0.0	0.035	13.8	0.0	1.8	2	0	0	2	2	2	1	Ribonuclease	R	winged-helix	domain
DUF2250	PF10007.4	gi|449067455|ref|YP_007434537.1|	-	0.028	14.3	0.1	0.052	13.4	0.0	1.6	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
RuvB_C	PF05491.8	gi|449067455|ref|YP_007434537.1|	-	0.034	13.7	0.1	0.077	12.6	0.1	1.6	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	ruvB	C-terminus
Mrr_N	PF14338.1	gi|449067455|ref|YP_007434537.1|	-	0.036	14.1	0.0	0.071	13.1	0.0	1.5	1	0	0	1	1	1	0	Mrr	N-terminal	domain
HTH_45	PF14947.1	gi|449067455|ref|YP_007434537.1|	-	0.04	13.7	0.0	0.074	12.8	0.0	1.5	1	0	0	1	1	1	0	Winged	helix-turn-helix
TrmB	PF01978.14	gi|449067455|ref|YP_007434537.1|	-	0.042	13.5	0.0	0.089	12.5	0.0	1.6	1	1	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
Rrf2	PF02082.15	gi|449067455|ref|YP_007434537.1|	-	0.11	12.6	0.0	0.21	11.7	0.0	1.4	1	0	0	1	1	1	0	Transcriptional	regulator
QRPTase_C	PF01729.14	gi|449067456|ref|YP_007434538.1|	-	4.1e-21	75.2	0.0	5.7e-21	74.7	0.0	1.2	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
QRPTase_N	PF02749.11	gi|449067456|ref|YP_007434538.1|	-	9.1e-05	22.2	0.0	0.00017	21.3	0.0	1.4	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
Antitoxin-MazE	PF04014.13	gi|449067457|ref|YP_007434539.1|	-	8.6e-09	34.9	0.1	4.3e-08	32.7	0.0	2.2	2	0	0	2	2	2	1	Antidote-toxin	recognition	MazE
PhoU	PF01895.14	gi|449067457|ref|YP_007434539.1|	-	0.0011	19.4	2.8	0.0011	19.4	1.9	2.9	3	0	0	3	3	3	2	PhoU	domain
Cytochrom_B562	PF07361.6	gi|449067457|ref|YP_007434539.1|	-	0.064	13.6	1.2	0.55	10.6	0.3	2.6	3	0	0	3	3	3	0	Cytochrome	b562
Adeno_E4	PF05385.6	gi|449067457|ref|YP_007434539.1|	-	0.13	12.1	0.9	0.95	9.4	0.2	2.3	2	0	0	2	2	2	0	Mastadenovirus	early	E4	13	kDa	protein
DUF711	PF05167.7	gi|449067458|ref|YP_007434540.1|	-	2.5e-76	256.9	0.0	3.4e-76	256.5	0.0	1.1	1	0	0	1	1	1	1	Uncharacterised	ACR	(DUF711)
DrsE_2	PF13686.1	gi|449067459|ref|YP_007434541.1|	-	2.6e-16	59.7	0.2	4.3e-15	55.7	0.1	1.9	1	1	0	1	1	1	1	DsrE/DsrF/DrsH-like	family
DrsE	PF02635.10	gi|449067459|ref|YP_007434541.1|	-	5.3e-08	32.9	0.0	6.9e-08	32.5	0.0	1.2	1	0	0	1	1	1	1	DsrE/DsrF-like	family
GUCT	PF08152.7	gi|449067459|ref|YP_007434541.1|	-	0.0049	16.8	0.0	0.0068	16.3	0.0	1.2	1	0	0	1	1	1	1	GUCT	(NUC152)	domain
TusA	PF01206.12	gi|449067460|ref|YP_007434542.1|	-	5.5e-10	38.7	0.0	6.8e-10	38.4	0.0	1.0	1	0	0	1	1	1	1	Sulfurtransferase	TusA
SH3_4	PF06347.8	gi|449067460|ref|YP_007434542.1|	-	0.043	13.3	1.3	0.078	12.5	0.9	1.6	1	1	0	1	1	1	0	Bacterial	SH3	domain
PALP	PF00291.20	gi|449067461|ref|YP_007434543.1|	-	2.9e-52	177.7	0.0	3.7e-52	177.4	0.0	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
Pkinase	PF00069.20	gi|449067463|ref|YP_007434545.1|	-	0.006	15.7	0.1	0.019	14.0	0.0	1.6	1	1	1	2	2	2	1	Protein	kinase	domain
DUF2671	PF10877.3	gi|449067463|ref|YP_007434545.1|	-	0.029	14.1	0.1	0.1	12.4	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2671)
S1-like	PF14444.1	gi|449067463|ref|YP_007434545.1|	-	0.042	13.5	0.0	0.079	12.6	0.0	1.4	1	0	0	1	1	1	0	S1-like
zf-ribbon_3	PF13248.1	gi|449067464|ref|YP_007434546.1|	-	0.013	14.6	0.0	0.017	14.3	0.0	1.3	1	0	0	1	1	1	0	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|449067464|ref|YP_007434546.1|	-	0.031	13.6	0.1	0.047	13.0	0.0	1.3	1	0	0	1	1	1	0	TFIIB	zinc-binding
zf-HIT	PF04438.11	gi|449067464|ref|YP_007434546.1|	-	0.086	12.4	0.4	0.12	12.0	0.3	1.1	1	0	0	1	1	1	0	HIT	zinc	finger
zf-IS66	PF13005.2	gi|449067464|ref|YP_007434546.1|	-	0.17	11.8	0.8	0.24	11.3	0.5	1.2	1	0	0	1	1	1	0	zinc-finger	binding	domain	of	transposase	IS66
zf-GRF	PF06839.7	gi|449067464|ref|YP_007434546.1|	-	0.22	11.4	1.8	0.28	11.1	0.3	1.8	1	1	1	2	2	2	0	GRF	zinc	finger
Mob_synth_C	PF06463.8	gi|449067465|ref|YP_007434547.1|	-	2.1e-26	92.0	0.1	3.4e-26	91.4	0.0	1.3	1	0	0	1	1	1	1	Molybdenum	Cofactor	Synthesis	C
Radical_SAM	PF04055.16	gi|449067465|ref|YP_007434547.1|	-	6.5e-24	84.9	0.1	2.3e-23	83.1	0.0	1.8	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|449067465|ref|YP_007434547.1|	-	1.6e-08	34.7	0.1	6.5e-08	32.7	0.0	1.9	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|449067465|ref|YP_007434547.1|	-	1.1e-07	31.9	0.0	4.3e-07	29.9	0.0	1.9	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
DUF3502	PF12010.3	gi|449067465|ref|YP_007434547.1|	-	0.011	15.7	0.0	1.2	9.0	0.0	2.5	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3502)
Peptidase_M24	PF00557.19	gi|449067466|ref|YP_007434548.1|	-	3.8e-62	209.5	1.2	4.8e-62	209.2	0.8	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.13	gi|449067466|ref|YP_007434548.1|	-	2.2e-16	60.5	0.0	4.5e-16	59.5	0.0	1.5	1	0	0	1	1	1	1	Creatinase/Prolidase	N-terminal	domain
Peptidase_U35_2	PF14550.1	gi|449067466|ref|YP_007434548.1|	-	0.063	12.8	0.1	0.14	11.7	0.0	1.6	1	0	0	1	1	1	0	Putative	phage	protease	XkdF
GTP_cyclohydroI	PF01227.17	gi|449067467|ref|YP_007434549.1|	-	1.2e-62	210.4	0.1	1.7e-62	209.8	0.0	1.3	1	1	0	1	1	1	1	GTP	cyclohydrolase	I
DUF2939	PF11159.3	gi|449067467|ref|YP_007434549.1|	-	0.04	14.1	0.0	0.13	12.4	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2939)
MarR	PF01047.17	gi|449067468|ref|YP_007434550.1|	-	3.8e-10	39.3	0.1	9.3e-09	34.8	0.1	2.8	3	0	0	3	3	3	1	MarR	family
HTH_24	PF13412.1	gi|449067468|ref|YP_007434550.1|	-	7.5e-08	31.6	2.1	3.2e-07	29.6	0.9	2.4	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.2	gi|449067468|ref|YP_007434550.1|	-	3.3e-07	29.8	0.0	6.1e-07	29.0	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_5	PF01022.15	gi|449067468|ref|YP_007434550.1|	-	8.4e-06	25.3	0.4	1.5e-05	24.5	0.3	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
TrmB	PF01978.14	gi|449067468|ref|YP_007434550.1|	-	4.6e-05	23.0	0.2	0.0011	18.6	0.2	2.3	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_Crp_2	PF13545.1	gi|449067468|ref|YP_007434550.1|	-	0.00024	20.8	0.1	0.00053	19.7	0.0	1.5	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_27	PF13463.1	gi|449067468|ref|YP_007434550.1|	-	0.00035	20.8	0.1	0.0011	19.2	0.0	1.8	2	0	0	2	2	1	1	Winged	helix	DNA-binding	domain
B-block_TFIIIC	PF04182.7	gi|449067468|ref|YP_007434550.1|	-	0.00076	19.2	0.2	0.017	14.9	0.1	2.3	2	0	0	2	2	2	1	B-block	binding	subunit	of	TFIIIC
TFIIE_alpha	PF02002.12	gi|449067468|ref|YP_007434550.1|	-	0.0029	17.0	0.5	0.0029	17.0	0.4	1.6	2	0	0	2	2	2	1	TFIIE	alpha	subunit
HTH_IclR	PF09339.5	gi|449067468|ref|YP_007434550.1|	-	0.0037	16.8	0.0	0.0063	16.0	0.0	1.4	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_36	PF13730.1	gi|449067468|ref|YP_007434550.1|	-	0.0074	16.3	0.2	0.039	14.0	0.1	2.3	2	1	0	2	2	2	1	Helix-turn-helix	domain
Cdc6_C	PF09079.6	gi|449067468|ref|YP_007434550.1|	-	0.0084	15.8	0.1	0.017	14.8	0.1	1.4	1	0	0	1	1	1	1	CDC6,	C	terminal
HTH_45	PF14947.1	gi|449067468|ref|YP_007434550.1|	-	0.011	15.5	0.4	0.27	11.0	0.2	2.9	3	0	0	3	3	3	0	Winged	helix-turn-helix
HTH_9	PF08221.6	gi|449067468|ref|YP_007434550.1|	-	0.017	14.9	0.1	0.034	14.0	0.1	1.5	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
Sp100	PF03172.8	gi|449067468|ref|YP_007434550.1|	-	0.033	14.1	0.5	0.32	10.9	0.0	2.8	4	0	0	4	4	4	0	Sp100	domain
DUF2250	PF10007.4	gi|449067468|ref|YP_007434550.1|	-	0.065	13.1	0.1	0.14	12.1	0.1	1.6	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Gln-synt_C	PF00120.19	gi|449067469|ref|YP_007434551.1|	-	1e-99	332.9	0.0	1.2e-99	332.6	0.0	1.1	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.14	gi|449067469|ref|YP_007434551.1|	-	2.9e-24	84.4	0.0	6.2e-24	83.3	0.0	1.6	1	0	0	1	1	1	1	Glutamine	synthetase,	beta-Grasp	domain
ABC_tran	PF00005.22	gi|449067470|ref|YP_007434552.1|	-	1.8e-21	76.8	0.0	2.5e-21	76.4	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|449067470|ref|YP_007434552.1|	-	1.5e-11	44.8	5.6	2e-05	24.7	0.7	2.2	1	1	1	2	2	2	2	AAA	domain
AAA_10	PF12846.2	gi|449067470|ref|YP_007434552.1|	-	1.9e-06	27.5	0.1	0.02	14.3	0.0	2.4	2	1	0	2	2	2	2	AAA-like	domain
AAA_22	PF13401.1	gi|449067470|ref|YP_007434552.1|	-	1.5e-05	25.1	0.1	3.5e-05	23.9	0.1	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_13	PF13166.1	gi|449067470|ref|YP_007434552.1|	-	5.2e-05	21.9	1.6	8.8e-05	21.1	0.1	1.8	1	1	0	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|449067470|ref|YP_007434552.1|	-	6.7e-05	23.6	0.6	0.00015	22.6	0.4	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|449067470|ref|YP_007434552.1|	-	0.00018	21.8	2.5	0.00043	20.5	1.7	1.6	1	1	0	1	1	1	1	AAA	domain
Zeta_toxin	PF06414.7	gi|449067470|ref|YP_007434552.1|	-	0.00022	20.3	0.0	0.00092	18.3	0.0	1.8	2	1	0	2	2	2	1	Zeta	toxin
NB-ARC	PF00931.17	gi|449067470|ref|YP_007434552.1|	-	0.00024	20.0	0.6	0.0004	19.3	0.0	1.5	2	0	0	2	2	2	1	NB-ARC	domain
AAA_23	PF13476.1	gi|449067470|ref|YP_007434552.1|	-	0.00025	21.4	9.6	0.0035	17.6	6.6	2.3	1	1	0	1	1	1	1	AAA	domain
T2SE	PF00437.15	gi|449067470|ref|YP_007434552.1|	-	0.00086	18.2	0.1	0.0015	17.4	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_16	PF13191.1	gi|449067470|ref|YP_007434552.1|	-	0.0014	18.6	0.0	0.0016	18.4	0.0	1.3	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_29	PF13555.1	gi|449067470|ref|YP_007434552.1|	-	0.0019	17.7	0.1	0.0036	16.8	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
NACHT	PF05729.7	gi|449067470|ref|YP_007434552.1|	-	0.0019	17.8	0.1	0.0034	17.0	0.0	1.4	1	0	0	1	1	1	1	NACHT	domain
Arch_ATPase	PF01637.13	gi|449067470|ref|YP_007434552.1|	-	0.0032	17.2	3.9	0.021	14.5	2.7	2.0	1	1	0	1	1	1	1	Archaeal	ATPase
AAA_15	PF13175.1	gi|449067470|ref|YP_007434552.1|	-	0.0056	15.7	12.2	0.011	14.7	8.4	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
PIF1	PF05970.9	gi|449067470|ref|YP_007434552.1|	-	0.006	15.5	0.3	0.011	14.6	0.0	1.5	2	0	0	2	2	2	1	PIF1-like	helicase
AAA	PF00004.24	gi|449067470|ref|YP_007434552.1|	-	0.0063	16.7	0.2	0.024	14.8	0.1	2.0	1	1	1	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF2075	PF09848.4	gi|449067470|ref|YP_007434552.1|	-	0.0063	15.5	0.0	0.0083	15.1	0.0	1.3	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_14	PF13173.1	gi|449067470|ref|YP_007434552.1|	-	0.0071	16.2	4.4	0.54	10.1	3.0	2.3	1	1	0	1	1	1	1	AAA	domain
UPF0079	PF02367.12	gi|449067470|ref|YP_007434552.1|	-	0.0082	15.7	0.1	0.025	14.1	0.0	1.7	2	0	0	2	2	2	1	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_24	PF13479.1	gi|449067470|ref|YP_007434552.1|	-	0.0097	15.5	0.1	0.02	14.5	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|449067470|ref|YP_007434552.1|	-	0.018	14.7	0.0	0.028	14.1	0.0	1.4	1	0	0	1	1	1	0	Part	of	AAA	domain
Miro	PF08477.8	gi|449067470|ref|YP_007434552.1|	-	0.022	15.2	0.2	0.071	13.6	0.0	1.8	1	1	0	1	1	1	0	Miro-like	protein
AAA_33	PF13671.1	gi|449067470|ref|YP_007434552.1|	-	0.024	14.5	0.0	0.052	13.4	0.0	1.8	1	1	0	1	1	1	0	AAA	domain
SMC_N	PF02463.14	gi|449067470|ref|YP_007434552.1|	-	0.037	13.2	0.1	0.076	12.2	0.1	1.5	1	0	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
PduV-EutP	PF10662.4	gi|449067470|ref|YP_007434552.1|	-	0.046	13.2	0.0	0.076	12.5	0.0	1.5	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
DUF258	PF03193.11	gi|449067470|ref|YP_007434552.1|	-	0.057	12.6	0.1	0.13	11.4	0.0	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF258
MobB	PF03205.9	gi|449067470|ref|YP_007434552.1|	-	0.06	13.0	0.9	0.16	11.6	0.6	2.0	1	1	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
SbcCD_C	PF13558.1	gi|449067470|ref|YP_007434552.1|	-	0.081	12.8	0.0	2.8	7.9	0.0	2.5	2	0	0	2	2	2	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_30	PF13604.1	gi|449067470|ref|YP_007434552.1|	-	0.098	12.2	0.0	0.12	11.9	0.0	1.4	1	1	0	1	1	1	0	AAA	domain
Zot	PF05707.7	gi|449067470|ref|YP_007434552.1|	-	0.26	10.7	1.0	1.5	8.2	0.7	2.2	1	1	0	1	1	1	0	Zonular	occludens	toxin	(Zot)
Thioredoxin	PF00085.15	gi|449067471|ref|YP_007434553.1|	-	4.1e-23	81.0	0.0	6.3e-23	80.4	0.0	1.3	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.1	gi|449067471|ref|YP_007434553.1|	-	7.2e-07	29.3	1.0	4.5e-06	26.8	0.2	2.3	2	1	0	2	2	2	1	Thioredoxin-like	domain
Thioredoxin_8	PF13905.1	gi|449067471|ref|YP_007434553.1|	-	0.00015	21.8	0.6	0.0032	17.5	0.1	2.6	1	1	2	3	3	3	1	Thioredoxin-like
Thioredoxin_7	PF13899.1	gi|449067471|ref|YP_007434553.1|	-	0.0026	17.7	0.0	0.0042	17.0	0.0	1.4	1	0	0	1	1	1	1	Thioredoxin-like
Thioredoxin_3	PF13192.1	gi|449067471|ref|YP_007434553.1|	-	0.0034	17.1	0.0	0.0079	15.9	0.0	1.7	1	1	1	2	2	2	1	Thioredoxin	domain
Redoxin	PF08534.5	gi|449067471|ref|YP_007434553.1|	-	0.059	12.9	0.2	0.096	12.2	0.1	1.4	1	1	0	1	1	1	0	Redoxin
Thioredoxin_9	PF14595.1	gi|449067471|ref|YP_007434553.1|	-	0.11	12.0	0.1	0.16	11.5	0.1	1.4	1	1	0	1	1	1	0	Thioredoxin
GHMP_kinases_C	PF08544.8	gi|449067472|ref|YP_007434554.1|	-	0.007	16.5	0.0	0.013	15.7	0.0	1.3	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
GHMP_kinases_N	PF00288.21	gi|449067472|ref|YP_007434554.1|	-	0.044	13.8	0.0	0.073	13.1	0.0	1.4	1	0	0	1	1	1	0	GHMP	kinases	N	terminal	domain
Nol1_Nop2_Fmu	PF01189.12	gi|449067473|ref|YP_007434555.1|	-	6.3e-31	107.8	0.1	6.7e-30	104.4	0.0	2.3	2	1	1	3	3	3	1	NOL1/NOP2/sun	family
Methyltransf_31	PF13847.1	gi|449067473|ref|YP_007434555.1|	-	1.2e-08	34.6	0.0	2.1e-08	33.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|449067473|ref|YP_007434555.1|	-	3.8e-05	23.7	0.0	5.7e-05	23.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
PUA	PF01472.15	gi|449067473|ref|YP_007434555.1|	-	0.00014	21.4	0.6	0.00032	20.3	0.4	1.6	1	0	0	1	1	1	1	PUA	domain
Methyltransf_18	PF12847.2	gi|449067473|ref|YP_007434555.1|	-	0.00038	21.0	0.0	0.0012	19.4	0.0	1.8	2	0	0	2	2	2	1	Methyltransferase	domain
MTS	PF05175.9	gi|449067473|ref|YP_007434555.1|	-	0.013	14.9	0.0	0.021	14.2	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	small	domain
SpoA	PF01052.15	gi|449067473|ref|YP_007434555.1|	-	0.11	12.1	0.6	2.6	7.7	0.1	2.5	1	1	1	2	2	2	0	Surface	presentation	of	antigens	(SPOA)
FlgI	PF02119.11	gi|449067473|ref|YP_007434555.1|	-	0.21	10.1	1.4	1.4	7.5	0.2	2.1	1	1	1	2	2	2	0	Flagellar	P-ring	protein
Hexapep	PF00132.19	gi|449067474|ref|YP_007434556.1|	-	3.1e-19	67.5	17.7	1.8e-07	30.3	2.1	4.6	3	1	2	5	5	5	4	Bacterial	transferase	hexapeptide	(six	repeats)
Hexapep_2	PF14602.1	gi|449067474|ref|YP_007434556.1|	-	3.4e-07	29.7	8.4	5e-06	25.9	2.0	3.5	4	0	0	4	4	4	2	Hexapeptide	repeat	of	succinyl-transferase
Radical_SAM	PF04055.16	gi|449067475|ref|YP_007434557.1|	-	3.2e-14	53.4	0.1	4.9e-13	49.5	0.0	2.4	1	1	1	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|449067475|ref|YP_007434557.1|	-	4.5e-10	39.7	0.0	2e-09	37.6	0.0	2.1	2	1	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|449067475|ref|YP_007434557.1|	-	5.9e-10	39.2	0.0	3.3e-09	36.7	0.0	2.2	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
DUF2073	PF09846.4	gi|449067475|ref|YP_007434557.1|	-	0.04	13.5	0.1	0.13	11.9	0.0	1.8	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2073)
SPASM	PF13186.1	gi|449067475|ref|YP_007434557.1|	-	0.12	12.7	0.7	0.61	10.4	0.0	2.4	3	0	0	3	3	3	0	Iron-sulfur	cluster-binding	domain
Phage_integrase	PF00589.17	gi|449067476|ref|YP_007434558.1|	-	8.5e-40	136.2	2.3	9.1e-40	136.1	0.5	1.7	2	0	0	2	2	2	1	Phage	integrase	family
Phage_int_SAM_4	PF13495.1	gi|449067476|ref|YP_007434558.1|	-	3e-14	53.0	0.5	6.8e-09	35.9	0.0	2.5	1	1	1	2	2	2	2	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_1	PF02899.12	gi|449067476|ref|YP_007434558.1|	-	9.2e-10	38.5	0.9	5.3e-05	23.3	0.0	2.9	2	1	1	3	3	3	2	Phage	integrase,	N-terminal	SAM-like	domain
Integrase_1	PF12835.2	gi|449067476|ref|YP_007434558.1|	-	1.3e-06	28.3	0.6	2.1e-06	27.6	0.4	1.3	1	0	0	1	1	1	1	Integrase
Ribosomal_S28e	PF01200.13	gi|449067476|ref|YP_007434558.1|	-	0.12	12.1	0.8	0.27	10.9	0.1	1.9	2	0	0	2	2	2	0	Ribosomal	protein	S28e
Pyr_redox_2	PF07992.9	gi|449067477|ref|YP_007434559.1|	-	0.00015	21.7	0.0	0.018	14.9	0.0	2.8	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|449067477|ref|YP_007434559.1|	-	0.0081	16.2	0.0	7.7	6.5	0.0	2.9	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|449067477|ref|YP_007434559.1|	-	0.095	13.1	0.0	11	6.5	0.0	2.5	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|449067477|ref|YP_007434559.1|	-	0.16	10.8	0.0	14	4.4	0.0	2.2	2	0	0	2	2	2	0	FAD	dependent	oxidoreductase
VitK2_biosynth	PF02621.9	gi|449067478|ref|YP_007434560.1|	-	0.00062	19.0	0.0	0.51	9.4	0.0	2.4	1	1	1	2	2	2	2	Menaquinone	biosynthesis
T2SE	PF00437.15	gi|449067480|ref|YP_007434562.1|	-	9.6e-43	146.0	0.0	2e-42	144.9	0.0	1.5	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
ABC_tran	PF00005.22	gi|449067480|ref|YP_007434562.1|	-	2e-05	24.9	0.0	5.2e-05	23.5	0.0	1.7	1	0	0	1	1	1	1	ABC	transporter
Arch_ATPase	PF01637.13	gi|449067480|ref|YP_007434562.1|	-	7.1e-05	22.6	2.6	0.00033	20.4	0.0	3.0	4	0	0	4	4	4	1	Archaeal	ATPase
AAA_29	PF13555.1	gi|449067480|ref|YP_007434562.1|	-	0.00017	21.0	0.0	0.00041	19.8	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.1	gi|449067480|ref|YP_007434562.1|	-	0.00035	20.7	0.0	0.001	19.2	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
MobB	PF03205.9	gi|449067480|ref|YP_007434562.1|	-	0.00037	20.2	0.0	0.0021	17.7	0.0	2.2	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
cobW	PF02492.14	gi|449067480|ref|YP_007434562.1|	-	0.00038	19.9	0.1	0.00067	19.1	0.0	1.4	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_18	PF13238.1	gi|449067480|ref|YP_007434562.1|	-	0.00068	19.9	0.3	0.003	17.8	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|449067480|ref|YP_007434562.1|	-	0.00087	20.0	0.2	0.0036	18.1	0.0	2.1	2	0	0	2	2	1	1	AAA	domain
AAA_14	PF13173.1	gi|449067480|ref|YP_007434562.1|	-	0.00094	19.0	0.1	0.0034	17.2	0.0	2.1	2	0	0	2	2	1	1	AAA	domain
AAA_16	PF13191.1	gi|449067480|ref|YP_007434562.1|	-	0.0011	19.0	0.0	0.0028	17.6	0.0	1.7	2	0	0	2	2	1	1	AAA	ATPase	domain
AAA_19	PF13245.1	gi|449067480|ref|YP_007434562.1|	-	0.0022	17.6	0.0	0.007	16.0	0.0	1.8	1	0	0	1	1	1	1	Part	of	AAA	domain
Pox_A32	PF04665.7	gi|449067480|ref|YP_007434562.1|	-	0.0033	16.7	0.0	0.007	15.6	0.0	1.5	1	0	0	1	1	1	1	Poxvirus	A32	protein
MMR_HSR1	PF01926.18	gi|449067480|ref|YP_007434562.1|	-	0.0036	17.2	0.1	0.0098	15.8	0.0	1.8	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
AAA_10	PF12846.2	gi|449067480|ref|YP_007434562.1|	-	0.0037	16.7	0.0	0.0077	15.7	0.0	1.5	1	0	0	1	1	1	1	AAA-like	domain
AAA_23	PF13476.1	gi|449067480|ref|YP_007434562.1|	-	0.0047	17.2	9.4	0.0047	17.2	6.5	2.7	2	1	0	2	2	2	1	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|449067480|ref|YP_007434562.1|	-	0.0085	15.5	0.0	0.02	14.4	0.0	1.5	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
AAA_28	PF13521.1	gi|449067480|ref|YP_007434562.1|	-	0.01	15.8	0.0	0.017	15.0	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
SRPRB	PF09439.5	gi|449067480|ref|YP_007434562.1|	-	0.016	14.4	0.0	0.032	13.4	0.0	1.5	1	0	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
NACHT	PF05729.7	gi|449067480|ref|YP_007434562.1|	-	0.016	14.8	0.0	0.032	13.9	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
Miro	PF08477.8	gi|449067480|ref|YP_007434562.1|	-	0.018	15.5	0.0	0.064	13.7	0.0	1.9	2	0	0	2	2	1	0	Miro-like	protein
AAA_33	PF13671.1	gi|449067480|ref|YP_007434562.1|	-	0.022	14.6	0.0	0.038	13.8	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
RNA12	PF10443.4	gi|449067480|ref|YP_007434562.1|	-	0.022	13.2	0.0	0.043	12.3	0.0	1.4	1	0	0	1	1	1	0	RNA12	protein
DUF258	PF03193.11	gi|449067480|ref|YP_007434562.1|	-	0.024	13.8	0.0	0.045	12.9	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
Zeta_toxin	PF06414.7	gi|449067480|ref|YP_007434562.1|	-	0.026	13.6	0.0	0.1	11.6	0.0	1.9	2	0	0	2	2	2	0	Zeta	toxin
AAA_5	PF07728.9	gi|449067480|ref|YP_007434562.1|	-	0.032	13.9	0.0	0.07	12.8	0.0	1.6	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
Guanylate_kin	PF00625.16	gi|449067480|ref|YP_007434562.1|	-	0.038	13.4	0.0	0.1	12.0	0.0	1.7	1	0	0	1	1	1	0	Guanylate	kinase
AAA	PF00004.24	gi|449067480|ref|YP_007434562.1|	-	0.041	14.0	0.0	0.098	12.8	0.0	1.7	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ResIII	PF04851.10	gi|449067480|ref|YP_007434562.1|	-	0.066	13.0	0.0	0.18	11.6	0.0	1.7	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
PduV-EutP	PF10662.4	gi|449067480|ref|YP_007434562.1|	-	0.076	12.5	0.0	0.2	11.1	0.0	1.7	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
SMC_N	PF02463.14	gi|449067480|ref|YP_007434562.1|	-	0.083	12.1	0.0	0.19	10.9	0.0	1.6	1	0	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
Mg_chelatase	PF01078.16	gi|449067480|ref|YP_007434562.1|	-	0.085	12.0	0.0	0.14	11.2	0.0	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_30	PF13604.1	gi|449067480|ref|YP_007434562.1|	-	0.09	12.3	0.0	0.16	11.5	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_24	PF13479.1	gi|449067480|ref|YP_007434562.1|	-	0.097	12.2	0.2	0.62	9.6	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
HTH_30	PF13556.1	gi|449067480|ref|YP_007434562.1|	-	0.1	12.2	0.1	0.35	10.4	0.1	1.9	1	0	0	1	1	1	0	PucR	C-terminal	helix-turn-helix	domain
Viral_helicase1	PF01443.13	gi|449067480|ref|YP_007434562.1|	-	0.13	11.8	0.0	0.23	10.9	0.0	1.5	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
AAA_21	PF13304.1	gi|449067480|ref|YP_007434562.1|	-	0.85	9.5	24.1	0.033	14.1	8.2	3.2	2	2	0	2	2	2	0	AAA	domain
DUF1628	PF07790.6	gi|449067482|ref|YP_007434564.1|	-	7.4e-05	23.4	1.9	0.00014	22.5	1.3	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1628)
DUF756	PF05506.7	gi|449067482|ref|YP_007434564.1|	-	0.0067	16.8	0.0	0.0093	16.4	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF756)
CBM_4_9	PF02018.12	gi|449067482|ref|YP_007434564.1|	-	0.018	15.0	0.2	0.061	13.3	0.1	1.9	1	1	0	1	1	1	0	Carbohydrate	binding	domain
DUF4131	PF13567.1	gi|449067482|ref|YP_007434564.1|	-	0.037	13.4	0.0	0.046	13.1	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
CPSase_sm_chain	PF00988.17	gi|449067482|ref|YP_007434564.1|	-	0.088	12.3	0.3	0.12	11.9	0.2	1.2	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	small	chain,	CPSase	domain
EcsB	PF05975.7	gi|449067482|ref|YP_007434564.1|	-	0.093	11.1	0.1	0.12	10.7	0.1	1.1	1	0	0	1	1	1	0	Bacterial	ABC	transporter	protein	EcsB
ETRAMP	PF09716.5	gi|449067482|ref|YP_007434564.1|	-	0.23	11.4	1.4	0.62	10.0	1.0	1.7	1	0	0	1	1	1	0	Malarial	early	transcribed	membrane	protein	(ETRAMP)
Big_5	PF13205.1	gi|449067482|ref|YP_007434564.1|	-	0.75	10.4	5.0	5.1	7.7	3.5	2.0	1	1	0	1	1	1	0	Bacterial	Ig-like	domain
HhH-GPD	PF00730.20	gi|449067484|ref|YP_007434566.1|	-	4.4e-16	59.1	0.0	6.9e-16	58.4	0.0	1.3	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
EndIII_4Fe-2S	PF10576.4	gi|449067484|ref|YP_007434566.1|	-	0.0016	18.5	3.7	0.0028	17.7	2.5	1.4	1	0	0	1	1	1	1	Iron-sulfur	binding	domain	of	endonuclease	III
HHH	PF00633.18	gi|449067484|ref|YP_007434566.1|	-	0.0029	17.2	0.0	0.009	15.6	0.0	1.9	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_8	PF14716.1	gi|449067484|ref|YP_007434566.1|	-	0.096	12.8	0.0	0.22	11.7	0.0	1.6	1	0	0	1	1	1	0	Helix-hairpin-helix	domain
HHH_5	PF14520.1	gi|449067484|ref|YP_007434566.1|	-	0.14	12.3	0.3	0.43	10.7	0.2	1.9	1	1	0	1	1	1	0	Helix-hairpin-helix	domain
ParBc	PF02195.13	gi|449067485|ref|YP_007434567.1|	-	1e-09	38.3	0.0	1.8e-09	37.5	0.0	1.3	1	0	0	1	1	1	1	ParB-like	nuclease	domain
DUF1015	PF06245.6	gi|449067485|ref|YP_007434567.1|	-	7.1e-05	21.4	0.5	0.21	10.0	0.1	2.7	1	1	0	2	2	2	2	Protein	of	unknown	function	(DUF1015)
B5	PF03484.10	gi|449067485|ref|YP_007434567.1|	-	0.074	12.8	0.0	0.14	12.0	0.0	1.6	1	0	0	1	1	1	0	tRNA	synthetase	B5	domain
Glycos_transf_2	PF00535.21	gi|449067486|ref|YP_007434568.1|	-	5.3e-22	78.2	0.1	8e-22	77.6	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|449067486|ref|YP_007434568.1|	-	2.8e-20	73.1	0.0	3.9e-20	72.6	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|449067486|ref|YP_007434568.1|	-	1.3e-17	64.1	0.1	1.3e-17	64.1	0.1	2.1	2	0	0	2	2	2	1	Glycosyl	transferase	family	group	2
Glyco_transf_21	PF13506.1	gi|449067486|ref|YP_007434568.1|	-	1.2e-10	41.0	0.0	4.9e-10	38.9	0.0	1.8	1	1	1	2	2	2	1	Glycosyl	transferase	family	21
Glyco_tranf_2_2	PF10111.4	gi|449067486|ref|YP_007434568.1|	-	2.6e-08	33.2	0.1	3.8e-08	32.7	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Osmo_MPGsynth	PF09488.5	gi|449067486|ref|YP_007434568.1|	-	0.0028	16.3	0.2	0.0043	15.7	0.2	1.2	1	0	0	1	1	1	1	Mannosyl-3-phosphoglycerate	synthase	(osmo_MPGsynth)
DEAD_assoc	PF08494.6	gi|449067487|ref|YP_007434569.1|	-	9.7e-59	198.2	0.1	1.9e-58	197.2	0.0	1.5	1	0	0	1	1	1	1	DEAD/H	associated
DEAD	PF00270.24	gi|449067487|ref|YP_007434569.1|	-	3.3e-29	101.5	0.0	1.3e-27	96.3	0.0	2.9	3	0	0	3	3	3	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|449067487|ref|YP_007434569.1|	-	6.1e-14	51.6	0.0	2e-13	49.9	0.0	1.8	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|449067487|ref|YP_007434569.1|	-	1.7e-06	28.0	0.0	9.3e-06	25.5	0.0	2.3	2	1	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Transketolase_C	PF02780.15	gi|449067487|ref|YP_007434569.1|	-	0.015	15.1	0.0	0.048	13.5	0.0	1.8	1	0	0	1	1	1	0	Transketolase,	C-terminal	domain
UDG	PF03167.14	gi|449067487|ref|YP_007434569.1|	-	0.16	11.4	0.0	0.35	10.3	0.0	1.5	1	0	0	1	1	1	0	Uracil	DNA	glycosylase	superfamily
AAA_19	PF13245.1	gi|449067487|ref|YP_007434569.1|	-	0.19	11.5	0.0	5.3	6.8	0.0	2.6	2	0	0	2	2	2	0	Part	of	AAA	domain
MGS	PF02142.17	gi|449067487|ref|YP_007434569.1|	-	0.73	9.8	3.0	2.1	8.3	0.1	3.1	3	1	0	3	3	3	0	MGS-like	domain
F-112	PF09645.5	gi|449067488|ref|YP_007434570.1|	-	0.1	12.4	0.0	0.13	12.1	0.0	1.2	1	0	0	1	1	1	0	F-112	protein
HrcA_DNA-bdg	PF03444.10	gi|449067489|ref|YP_007434571.1|	-	6.5e-36	121.6	0.3	1.4e-35	120.5	0.2	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
CBS	PF00571.23	gi|449067489|ref|YP_007434571.1|	-	1.2e-28	98.6	0.8	1.5e-14	53.4	0.6	2.4	2	0	0	2	2	2	2	CBS	domain
Rrf2	PF02082.15	gi|449067489|ref|YP_007434571.1|	-	6.3e-09	35.8	0.4	2.6e-08	33.8	0.0	2.3	2	1	0	2	2	2	1	Transcriptional	regulator
HTH_11	PF08279.7	gi|449067489|ref|YP_007434571.1|	-	2e-05	24.1	1.1	4e-05	23.1	0.1	2.0	2	0	0	2	2	2	1	HTH	domain
TrmB	PF01978.14	gi|449067489|ref|YP_007434571.1|	-	0.0027	17.3	0.5	0.0086	15.7	0.1	2.0	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|449067489|ref|YP_007434571.1|	-	0.02	14.2	0.9	0.048	13.0	0.6	1.7	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
TFIIH_BTF_p62_N	PF08567.6	gi|449067489|ref|YP_007434571.1|	-	0.034	13.7	0.0	0.08	12.6	0.0	1.6	1	0	0	1	1	1	0	TFIIH	p62	subunit,	N-terminal	domain
GntR	PF00392.16	gi|449067489|ref|YP_007434571.1|	-	0.037	13.4	0.0	0.15	11.5	0.0	2.0	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
RuvB_C	PF05491.8	gi|449067489|ref|YP_007434571.1|	-	0.045	13.3	0.0	0.1	12.2	0.0	1.6	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	ruvB	C-terminus
DUF2097	PF09870.4	gi|449067489|ref|YP_007434571.1|	-	0.053	13.6	3.1	0.39	10.8	0.1	2.6	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2097)
HTH_38	PF13936.1	gi|449067489|ref|YP_007434571.1|	-	0.06	12.9	0.1	0.13	11.8	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|449067489|ref|YP_007434571.1|	-	0.064	12.7	0.3	0.59	9.6	0.0	2.2	2	0	0	2	2	2	0	Sigma-70,	region	4
HTH_IclR	PF09339.5	gi|449067489|ref|YP_007434571.1|	-	0.066	12.8	0.0	0.13	11.8	0.0	1.5	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
DUF2192	PF09958.4	gi|449067490|ref|YP_007434572.1|	-	4.6e-87	291.0	6.6	5.1e-87	290.9	4.6	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2192)
Lipoprotein_3	PF00938.12	gi|449067490|ref|YP_007434572.1|	-	0.11	12.2	0.0	0.3	10.8	0.0	1.7	1	0	0	1	1	1	0	Lipoprotein
DUF4070	PF13282.1	gi|449067490|ref|YP_007434572.1|	-	0.13	11.8	0.0	0.22	11.0	0.0	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4070)
FlaC_arch	PF05377.6	gi|449067491|ref|YP_007434573.1|	-	0.00068	19.4	2.7	0.0012	18.6	1.9	1.3	1	0	0	1	1	1	1	Flagella	accessory	protein	C	(FlaC)
Laminin_II	PF06009.7	gi|449067491|ref|YP_007434573.1|	-	0.00096	18.9	0.8	0.0014	18.4	0.6	1.2	1	0	0	1	1	1	1	Laminin	Domain	II
Spc7	PF08317.6	gi|449067491|ref|YP_007434573.1|	-	0.022	13.4	0.5	0.025	13.2	0.3	1.1	1	0	0	1	1	1	0	Spc7	kinetochore	protein
RmuC	PF02646.11	gi|449067491|ref|YP_007434573.1|	-	0.067	12.0	0.1	0.079	11.7	0.1	1.1	1	0	0	1	1	1	0	RmuC	family
DUF3375	PF11855.3	gi|449067491|ref|YP_007434573.1|	-	0.14	10.8	0.0	0.16	10.6	0.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3375)
bZIP_1	PF00170.16	gi|449067491|ref|YP_007434573.1|	-	0.16	11.9	3.1	0.41	10.6	2.1	1.7	1	1	0	1	1	1	0	bZIP	transcription	factor
GP41	PF00517.12	gi|449067491|ref|YP_007434573.1|	-	0.18	11.3	3.0	0.11	12.0	1.0	1.3	1	1	0	1	1	1	0	Retroviral	envelope	protein
WD40_alt	PF14077.1	gi|449067491|ref|YP_007434573.1|	-	0.51	10.0	3.2	0.69	9.5	0.7	2.1	1	1	1	2	2	2	0	Alternative	WD40	repeat	motif
DivIC	PF04977.10	gi|449067491|ref|YP_007434573.1|	-	0.76	9.3	3.6	4.6	6.8	2.5	1.9	1	1	0	1	1	1	0	Septum	formation	initiator
HTH_3	PF01381.17	gi|449067492|ref|YP_007434574.1|	-	3.7e-08	33.0	0.5	8.1e-08	31.9	0.0	1.8	2	0	0	2	2	2	1	Helix-turn-helix
HTH_19	PF12844.2	gi|449067492|ref|YP_007434574.1|	-	0.00014	21.8	0.5	0.00099	19.1	0.1	2.5	1	1	1	2	2	2	1	Helix-turn-helix	domain
HTH_26	PF13443.1	gi|449067492|ref|YP_007434574.1|	-	0.00064	19.8	0.3	0.0066	16.6	0.0	2.3	2	1	0	2	2	2	1	Cro/C1-type	HTH	DNA-binding	domain
HTH_11	PF08279.7	gi|449067492|ref|YP_007434574.1|	-	0.0008	19.0	0.1	0.0008	19.0	0.1	2.1	3	0	0	3	3	3	1	HTH	domain
Sigma70_r4_2	PF08281.7	gi|449067492|ref|YP_007434574.1|	-	0.0014	18.0	0.1	0.0024	17.2	0.1	1.4	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_AsnC-type	PF13404.1	gi|449067492|ref|YP_007434574.1|	-	0.0017	17.8	4.3	0.2	11.2	0.8	3.3	2	1	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
HTH_23	PF13384.1	gi|449067492|ref|YP_007434574.1|	-	0.0022	17.6	0.0	0.0043	16.6	0.0	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_Tnp_ISL3	PF13542.1	gi|449067492|ref|YP_007434574.1|	-	0.0028	16.7	0.0	0.0043	16.1	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain	of	transposase	family	ISL3
Trp_repressor	PF01371.14	gi|449067492|ref|YP_007434574.1|	-	0.0045	16.8	0.0	0.011	15.6	0.0	1.7	1	1	1	2	2	2	1	Trp	repressor	protein
DUF948	PF06103.6	gi|449067492|ref|YP_007434574.1|	-	0.0048	16.7	1.6	0.014	15.2	0.1	2.0	1	1	1	2	2	2	1	Bacterial	protein	of	unknown	function	(DUF948)
Fe_dep_repress	PF01325.14	gi|449067492|ref|YP_007434574.1|	-	0.0053	16.6	0.0	0.012	15.5	0.0	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_31	PF13560.1	gi|449067492|ref|YP_007434574.1|	-	0.009	16.1	0.0	0.012	15.7	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|449067492|ref|YP_007434574.1|	-	0.012	14.9	0.2	0.012	14.9	0.2	3.1	3	1	1	4	4	4	0	Winged	helix-turn-helix	DNA-binding
HTH_28	PF13518.1	gi|449067492|ref|YP_007434574.1|	-	0.014	15.3	0.0	0.03	14.3	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|449067492|ref|YP_007434574.1|	-	0.016	14.8	0.9	0.095	12.3	0.1	2.3	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
MarR_2	PF12802.2	gi|449067492|ref|YP_007434574.1|	-	0.026	14.1	0.0	0.042	13.5	0.0	1.4	1	0	0	1	1	1	0	MarR	family
HTH_Mga	PF08280.6	gi|449067492|ref|YP_007434574.1|	-	0.029	14.1	1.9	3	7.6	0.0	2.5	2	0	0	2	2	2	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
DUF3510	PF12022.3	gi|449067492|ref|YP_007434574.1|	-	0.031	14.3	0.2	0.039	14.0	0.2	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3510)
ENT	PF03735.9	gi|449067492|ref|YP_007434574.1|	-	0.039	13.6	0.1	0.11	12.2	0.0	1.9	1	1	1	2	2	2	0	ENT	domain
DUF3557	PF12078.3	gi|449067492|ref|YP_007434574.1|	-	0.061	13.0	0.4	1.5	8.5	0.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3557)
HTH_6	PF01418.12	gi|449067492|ref|YP_007434574.1|	-	0.068	12.9	0.1	0.23	11.2	0.1	1.9	1	1	0	1	1	1	0	Helix-turn-helix	domain,	rpiR	family
Sigma70_r3	PF04539.11	gi|449067492|ref|YP_007434574.1|	-	0.072	12.9	1.1	0.33	10.8	0.0	2.3	2	1	0	2	2	2	0	Sigma-70	region	3
HMGL-like	PF00682.14	gi|449067492|ref|YP_007434574.1|	-	0.095	12.3	0.8	0.11	12.1	0.6	1.0	1	0	0	1	1	1	0	HMGL-like
HTH_29	PF13551.1	gi|449067492|ref|YP_007434574.1|	-	0.15	12.2	0.0	0.24	11.5	0.0	1.6	1	1	0	1	1	1	0	Winged	helix-turn	helix
PP1_inhibitor	PF05361.7	gi|449067492|ref|YP_007434574.1|	-	0.67	9.6	3.0	0.68	9.6	1.6	1.5	1	1	0	1	1	1	0	PKC-activated	protein	phosphatase-1	inhibitor
Aminotran_1_2	PF00155.16	gi|449067494|ref|YP_007434576.1|	-	4.5e-41	140.9	0.0	5.2e-41	140.8	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_MocR	PF12897.2	gi|449067494|ref|YP_007434576.1|	-	3.7e-10	38.9	0.0	4.9e-10	38.5	0.0	1.1	1	0	0	1	1	1	1	Alanine-glyoxylate	amino-transferase
DegT_DnrJ_EryC1	PF01041.12	gi|449067494|ref|YP_007434576.1|	-	0.00026	20.1	0.0	0.00045	19.3	0.0	1.4	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Cys_Met_Meta_PP	PF01053.15	gi|449067494|ref|YP_007434576.1|	-	0.012	13.9	0.0	0.021	13.1	0.0	1.3	1	0	0	1	1	1	0	Cys/Met	metabolism	PLP-dependent	enzyme
Beta_elim_lyase	PF01212.16	gi|449067494|ref|YP_007434576.1|	-	0.022	13.9	0.0	0.037	13.1	0.0	1.4	1	0	0	1	1	1	0	Beta-eliminating	lyase
Mst1_SARAH	PF11629.3	gi|449067494|ref|YP_007434576.1|	-	0.058	13.2	1.0	0.18	11.6	0.7	1.9	1	0	0	1	1	1	0	C	terminal	SARAH	domain	of	Mst1
OKR_DC_1	PF01276.15	gi|449067494|ref|YP_007434576.1|	-	0.085	11.3	0.0	1.1	7.7	0.0	2.0	2	0	0	2	2	2	0	Orn/Lys/Arg	decarboxylase,	major	domain
MoCF_biosynth	PF00994.19	gi|449067495|ref|YP_007434577.1|	-	2.9e-28	98.0	0.1	4.7e-28	97.3	0.0	1.3	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
DUF4261	PF14080.1	gi|449067495|ref|YP_007434577.1|	-	0.02	14.7	0.4	0.52	10.1	0.0	2.8	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4261)
CotJB	PF12652.2	gi|449067495|ref|YP_007434577.1|	-	0.11	12.5	0.1	33	4.6	0.0	3.0	2	1	1	3	3	3	0	CotJB	protein
Abhydrolase_6	PF12697.2	gi|449067496|ref|YP_007434578.1|	-	4.9e-18	65.8	0.0	5.7e-18	65.6	0.0	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|449067496|ref|YP_007434578.1|	-	2.5e-12	46.8	0.0	3.4e-10	39.8	0.0	2.1	1	1	0	1	1	1	1	alpha/beta	hydrolase	fold
Abhydrolase_5	PF12695.2	gi|449067496|ref|YP_007434578.1|	-	7.7e-11	41.9	0.0	3.4e-10	39.8	0.0	1.8	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
DUF1749	PF08538.5	gi|449067496|ref|YP_007434578.1|	-	0.039	12.8	0.0	5.9	5.6	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1749)
DLH	PF01738.13	gi|449067496|ref|YP_007434578.1|	-	0.074	12.3	0.0	1.2	8.3	0.0	2.2	2	0	0	2	2	2	0	Dienelactone	hydrolase	family
Ndr	PF03096.9	gi|449067496|ref|YP_007434578.1|	-	0.098	11.1	0.0	0.14	10.6	0.0	1.3	1	1	0	1	1	1	0	Ndr	family
FSH1	PF03959.8	gi|449067496|ref|YP_007434578.1|	-	0.1	12.0	0.0	0.14	11.6	0.0	1.2	1	0	0	1	1	1	0	Serine	hydrolase	(FSH1)
Thioesterase	PF00975.15	gi|449067496|ref|YP_007434578.1|	-	0.12	12.5	0.0	0.22	11.6	0.0	1.4	1	1	0	1	1	1	0	Thioesterase	domain
B5	PF03484.10	gi|449067497|ref|YP_007434579.1|	-	1.6e-19	69.4	1.0	7.5e-17	60.9	0.1	2.7	2	0	0	2	2	2	2	tRNA	synthetase	B5	domain
B3_4	PF03483.12	gi|449067497|ref|YP_007434579.1|	-	1.8e-14	53.5	0.2	5.8e-14	51.9	0.1	1.9	2	0	0	2	2	2	1	B3/4	domain
tRNA-synt_2d	PF01409.15	gi|449067498|ref|YP_007434580.1|	-	2.6e-81	272.4	0.0	3.6e-81	272.0	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	II	core	domain	(F)
TrmB	PF01978.14	gi|449067498|ref|YP_007434580.1|	-	4.4e-08	32.7	3.3	1.4e-06	27.9	0.6	2.9	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|449067498|ref|YP_007434580.1|	-	7.5e-07	28.4	0.6	7.5e-07	28.4	0.4	2.2	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_34	PF13601.1	gi|449067498|ref|YP_007434580.1|	-	1.3e-05	25.1	0.1	3.9e-05	23.6	0.1	1.8	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_27	PF13463.1	gi|449067498|ref|YP_007434580.1|	-	2.6e-05	24.4	1.8	0.0061	16.8	0.0	3.7	4	0	0	4	4	4	1	Winged	helix	DNA-binding	domain
tRNA-synt_2	PF00152.15	gi|449067498|ref|YP_007434580.1|	-	4.5e-05	22.3	5.0	0.018	13.8	0.1	3.3	3	1	0	3	3	3	2	tRNA	synthetases	class	II	(D,	K	and	N)
MarR	PF01047.17	gi|449067498|ref|YP_007434580.1|	-	0.00057	19.5	0.3	0.0048	16.5	0.1	2.5	2	0	0	2	2	2	1	MarR	family
HTH_IclR	PF09339.5	gi|449067498|ref|YP_007434580.1|	-	0.0013	18.3	0.0	0.0031	17.0	0.0	1.6	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
DUF2250	PF10007.4	gi|449067498|ref|YP_007434580.1|	-	0.0026	17.6	1.1	0.0026	17.6	0.8	2.2	2	0	0	2	2	2	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Penicillinase_R	PF03965.11	gi|449067498|ref|YP_007434580.1|	-	0.007	16.4	0.4	0.81	9.7	0.0	2.9	3	0	0	3	3	3	1	Penicillinase	repressor
MarR_2	PF12802.2	gi|449067498|ref|YP_007434580.1|	-	0.0072	15.9	2.2	0.025	14.2	0.0	2.9	3	0	0	3	3	3	1	MarR	family
tRNA-synt_2b	PF00587.20	gi|449067498|ref|YP_007434580.1|	-	0.0078	15.8	0.8	0.048	13.2	0.6	2.5	1	1	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
FeoC	PF09012.5	gi|449067498|ref|YP_007434580.1|	-	0.011	15.3	0.1	0.031	13.9	0.1	1.7	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
HTH_20	PF12840.2	gi|449067498|ref|YP_007434580.1|	-	0.054	13.2	0.0	0.25	11.1	0.0	2.2	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_36	PF13730.1	gi|449067498|ref|YP_007434580.1|	-	0.14	12.3	1.9	0.55	10.3	1.0	2.2	2	0	0	2	2	2	0	Helix-turn-helix	domain
Lactamase_B_3	PF13483.1	gi|449067499|ref|YP_007434581.1|	-	3.2e-18	65.9	0.0	4.7e-18	65.4	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.2	gi|449067499|ref|YP_007434581.1|	-	2.6e-15	56.4	0.1	3.5e-15	56.0	0.1	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|449067499|ref|YP_007434581.1|	-	3.6e-10	39.8	0.2	5e-10	39.3	0.1	1.2	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Peptidase_M24	PF00557.19	gi|449067500|ref|YP_007434582.1|	-	2.3e-46	158.0	0.1	2.7e-46	157.7	0.0	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
YcfA	PF07927.7	gi|449067500|ref|YP_007434582.1|	-	0.4	10.6	1.8	4.9	7.1	0.3	2.9	3	0	0	3	3	3	0	YcfA-like	protein
DUF1512	PF07431.7	gi|449067501|ref|YP_007434583.1|	-	6e-132	439.6	10.2	7.3e-132	439.4	7.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1512)
UBACT	PF02134.16	gi|449067501|ref|YP_007434583.1|	-	0.18	11.3	0.1	0.18	11.3	0.1	2.2	3	0	0	3	3	3	0	Repeat	in	ubiquitin-activating	(UBA)	protein
HD	PF01966.17	gi|449067503|ref|YP_007434585.1|	-	2.2e-09	37.3	0.3	9e-09	35.3	0.1	2.0	2	0	0	2	2	2	1	HD	domain
Hydrolase_3	PF08282.7	gi|449067504|ref|YP_007434586.1|	-	4.2e-27	95.3	0.3	1.6e-14	54.1	0.1	2.0	1	1	1	2	2	2	2	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.2	gi|449067504|ref|YP_007434586.1|	-	7.1e-08	32.8	3.9	3e-07	30.8	0.0	2.2	1	1	1	2	2	2	1	haloacid	dehalogenase-like	hydrolase
S6PP	PF05116.8	gi|449067504|ref|YP_007434586.1|	-	3.8e-06	26.3	0.0	0.00082	18.7	0.0	2.1	2	0	0	2	2	2	2	Sucrose-6F-phosphate	phosphohydrolase
Hydrolase	PF00702.21	gi|449067504|ref|YP_007434586.1|	-	7.1e-06	26.5	1.3	0.00028	21.3	0.0	2.6	1	1	1	2	2	2	1	haloacid	dehalogenase-like	hydrolase
HAD_2	PF13419.1	gi|449067504|ref|YP_007434586.1|	-	4.8e-05	23.6	0.1	0.52	10.5	0.0	2.7	2	1	1	3	3	3	2	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|449067504|ref|YP_007434586.1|	-	0.0073	15.9	0.0	0.013	15.1	0.0	1.4	1	0	0	1	1	1	1	HAD-hyrolase-like
Hydrolase_6	PF13344.1	gi|449067504|ref|YP_007434586.1|	-	0.02	14.8	0.1	0.057	13.3	0.0	1.8	2	0	0	2	2	2	0	Haloacid	dehalogenase-like	hydrolase
tRNA-synt_1c	PF00749.16	gi|449067505|ref|YP_007434587.1|	-	1e-80	270.7	0.1	7.5e-80	267.9	0.0	2.0	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
tRNA-synt_1c_C	PF03950.13	gi|449067505|ref|YP_007434587.1|	-	9.3e-23	80.7	0.0	1.7e-22	79.8	0.0	1.5	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(E	and	Q),	anti-codon	binding	domain
DUF1869	PF08956.5	gi|449067505|ref|YP_007434587.1|	-	0.018	14.5	0.5	3.2	7.4	0.0	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1869)
tRNA-synt_1d	PF00750.14	gi|449067505|ref|YP_007434587.1|	-	0.066	12.0	0.1	0.18	10.5	0.0	1.6	1	1	1	2	2	2	0	tRNA	synthetases	class	I	(R)
Ribosomal_L7Ae	PF01248.21	gi|449067506|ref|YP_007434588.1|	-	2.8e-33	113.2	1.8	3.4e-33	113.0	1.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
PELOTA_1	PF15608.1	gi|449067506|ref|YP_007434588.1|	-	0.00013	21.6	0.1	0.00019	21.1	0.0	1.2	1	0	0	1	1	1	1	PELOTA	RNA	binding	domain
RNase_P_pop3	PF08228.6	gi|449067506|ref|YP_007434588.1|	-	0.00042	20.1	0.1	0.00048	19.9	0.1	1.1	1	0	0	1	1	1	1	RNase	P	subunit	Pop3
DbpA	PF03880.10	gi|449067506|ref|YP_007434588.1|	-	0.028	14.0	0.4	0.35	10.5	0.1	2.7	3	1	0	3	3	3	0	DbpA	RNA	binding	domain
DUF1269	PF06897.7	gi|449067506|ref|YP_007434588.1|	-	0.079	12.9	1.0	16	5.5	0.1	2.5	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1269)
eRF1_3	PF03465.10	gi|449067506|ref|YP_007434588.1|	-	0.11	12.7	0.3	0.15	12.2	0.2	1.3	1	1	0	1	1	1	0	eRF1	domain	3
Sugar_tr	PF00083.19	gi|449067507|ref|YP_007434589.1|	-	1.4e-46	159.0	23.4	1.8e-46	158.7	16.2	1.1	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|449067507|ref|YP_007434589.1|	-	7.1e-31	107.1	44.4	2e-22	79.3	11.1	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_2	PF13347.1	gi|449067507|ref|YP_007434589.1|	-	5.6e-05	21.7	2.1	5.6e-05	21.7	1.4	3.5	2	1	0	2	2	2	1	MFS/sugar	transport	protein
TRI12	PF06609.8	gi|449067507|ref|YP_007434589.1|	-	0.00061	18.1	12.4	0.013	13.7	2.3	2.1	2	0	0	2	2	2	2	Fungal	trichothecene	efflux	pump	(TRI12)
DUF1228	PF06779.9	gi|449067507|ref|YP_007434589.1|	-	0.011	15.7	11.4	0.02	14.8	0.5	3.8	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF1228)
DUF1138	PF06592.8	gi|449067507|ref|YP_007434589.1|	-	0.051	13.5	0.2	0.14	12.1	0.2	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1138)
HTH_45	PF14947.1	gi|449067508|ref|YP_007434590.1|	-	0.00028	20.6	0.7	0.0017	18.1	0.0	2.6	3	0	0	3	3	3	1	Winged	helix-turn-helix
TrmB	PF01978.14	gi|449067508|ref|YP_007434590.1|	-	0.00062	19.4	0.0	0.0018	17.9	0.0	1.8	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
Miro	PF08477.8	gi|449067508|ref|YP_007434590.1|	-	0.047	14.1	0.0	0.13	12.7	0.0	1.8	1	0	0	1	1	1	0	Miro-like	protein
MGDG_synth	PF06925.6	gi|449067509|ref|YP_007434591.1|	-	0.041	13.7	0.4	0.048	13.5	0.3	1.1	1	0	0	1	1	1	0	Monogalactosyldiacylglycerol	(MGDG)	synthase
Sigma70_r4	PF04545.11	gi|449067510|ref|YP_007434592.1|	-	1.1e-05	24.6	0.0	2.2e-05	23.6	0.0	1.6	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_3	PF01381.17	gi|449067510|ref|YP_007434592.1|	-	5.4e-05	22.9	0.0	0.0001	22.0	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix
HTH_37	PF13744.1	gi|449067510|ref|YP_007434592.1|	-	0.00062	19.5	0.3	0.0012	18.6	0.1	1.6	1	1	0	1	1	1	1	Helix-turn-helix	domain
HTH_38	PF13936.1	gi|449067510|ref|YP_007434592.1|	-	0.0038	16.7	0.0	0.0081	15.6	0.0	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_19	PF12844.2	gi|449067510|ref|YP_007434592.1|	-	0.0056	16.7	0.0	0.0089	16.0	0.0	1.4	1	1	0	1	1	1	1	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|449067510|ref|YP_007434592.1|	-	0.0086	15.5	0.1	0.068	12.6	0.1	2.2	1	1	0	1	1	1	1	Sigma-70,	region	4
HTH_31	PF13560.1	gi|449067510|ref|YP_007434592.1|	-	0.011	15.8	0.0	0.016	15.4	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_26	PF13443.1	gi|449067510|ref|YP_007434592.1|	-	0.024	14.8	0.0	0.041	14.1	0.0	1.3	1	0	0	1	1	1	0	Cro/C1-type	HTH	DNA-binding	domain
ATP-synt_E_2	PF08112.6	gi|449067510|ref|YP_007434592.1|	-	0.042	13.9	1.3	0.069	13.2	0.9	1.3	1	0	0	1	1	1	0	ATP	synthase	epsilon	subunit
Snf7	PF03357.16	gi|449067510|ref|YP_007434592.1|	-	0.075	12.4	0.5	0.12	11.7	0.1	1.5	1	1	1	2	2	2	0	Snf7
HTH_AsnC-type	PF13404.1	gi|449067510|ref|YP_007434592.1|	-	0.096	12.2	0.0	0.23	11.0	0.0	1.6	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
HTH_10	PF04967.7	gi|449067510|ref|YP_007434592.1|	-	0.1	12.1	0.2	2	8.0	0.0	2.2	2	0	0	2	2	2	0	HTH	DNA	binding	domain
DUF603	PF04645.7	gi|449067510|ref|YP_007434592.1|	-	0.18	11.7	1.3	0.35	10.7	0.1	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function,	DUF603
Hemocyanin_N	PF03722.9	gi|449067511|ref|YP_007434593.1|	-	0.079	13.1	0.3	0.11	12.6	0.2	1.3	1	1	0	1	1	1	0	Hemocyanin,	all-alpha	domain
DUF2683	PF10884.3	gi|449067513|ref|YP_007434595.1|	-	0.0062	16.4	0.1	0.0077	16.1	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2683)
RHH_1	PF01402.16	gi|449067513|ref|YP_007434595.1|	-	0.011	15.6	0.2	0.082	12.8	0.1	2.0	1	1	0	1	1	1	0	Ribbon-helix-helix	protein,	copG	family
RHH_3	PF12651.2	gi|449067513|ref|YP_007434595.1|	-	0.022	14.4	0.3	0.11	12.3	0.2	1.9	1	1	0	1	1	1	0	Ribbon-helix-helix	domain
Anticodon_1	PF08264.8	gi|449067513|ref|YP_007434595.1|	-	0.1	12.3	0.1	0.12	12.1	0.1	1.1	1	0	0	1	1	1	0	Anticodon-binding	domain	of	tRNA
Thermopsin	PF05317.6	gi|449067514|ref|YP_007434596.1|	-	3.3e-84	281.9	16.4	3.3e-84	281.9	11.4	2.6	2	1	0	2	2	2	1	Thermopsin
TAP_C	PF03943.8	gi|449067514|ref|YP_007434596.1|	-	0.055	12.8	0.0	0.11	11.9	0.0	1.4	1	0	0	1	1	1	0	TAP	C-terminal	domain
ABC_tran	PF00005.22	gi|449067516|ref|YP_007434598.1|	-	1.1e-33	116.4	0.0	1.9e-33	115.6	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|449067516|ref|YP_007434598.1|	-	4.2e-14	53.1	3.6	2e-06	28.0	0.6	2.1	1	1	1	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|449067516|ref|YP_007434598.1|	-	0.00016	20.8	2.9	0.014	14.4	0.2	2.2	1	1	1	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|449067516|ref|YP_007434598.1|	-	0.00022	20.5	0.1	0.062	12.5	0.0	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA	PF00004.24	gi|449067516|ref|YP_007434598.1|	-	0.002	18.3	0.1	0.0066	16.6	0.1	2.0	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_23	PF13476.1	gi|449067516|ref|YP_007434598.1|	-	0.0025	18.1	0.7	0.0048	17.2	0.5	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|449067516|ref|YP_007434598.1|	-	0.0028	17.1	0.0	0.0053	16.2	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
SRP54	PF00448.17	gi|449067516|ref|YP_007434598.1|	-	0.0074	15.7	0.3	0.017	14.5	0.0	1.6	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
NTPase_1	PF03266.10	gi|449067516|ref|YP_007434598.1|	-	0.013	15.1	0.2	0.043	13.5	0.1	2.0	1	1	0	1	1	1	0	NTPase
AAA_19	PF13245.1	gi|449067516|ref|YP_007434598.1|	-	0.016	14.9	0.1	0.038	13.7	0.1	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_28	PF13521.1	gi|449067516|ref|YP_007434598.1|	-	0.023	14.6	0.0	0.043	13.7	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
DUF3584	PF12128.3	gi|449067516|ref|YP_007434598.1|	-	0.029	11.7	0.0	0.039	11.3	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
AAA_17	PF13207.1	gi|449067516|ref|YP_007434598.1|	-	0.031	15.1	0.2	0.07	13.9	0.1	1.8	2	1	0	2	2	1	0	AAA	domain
AAA_14	PF13173.1	gi|449067516|ref|YP_007434598.1|	-	0.032	14.1	0.0	0.14	12.0	0.0	1.8	1	1	1	2	2	2	0	AAA	domain
AAA_30	PF13604.1	gi|449067516|ref|YP_007434598.1|	-	0.047	13.2	0.0	0.1	12.1	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.7	gi|449067516|ref|YP_007434598.1|	-	0.052	12.6	0.0	0.073	12.1	0.0	1.4	1	1	0	1	1	1	0	Zeta	toxin
AAA_18	PF13238.1	gi|449067516|ref|YP_007434598.1|	-	0.077	13.3	0.9	0.17	12.1	0.6	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_22	PF13401.1	gi|449067516|ref|YP_007434598.1|	-	0.092	12.8	0.5	0.27	11.3	0.3	1.8	1	1	0	1	1	1	0	AAA	domain
AAA_5	PF07728.9	gi|449067516|ref|YP_007434598.1|	-	0.12	12.1	1.1	0.7	9.6	0.2	2.1	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.1	gi|449067516|ref|YP_007434598.1|	-	0.13	12.2	0.2	0.24	11.3	0.1	1.7	1	1	0	1	1	1	0	AAA	ATPase	domain
DNA_pol_B	PF00136.16	gi|449067517|ref|YP_007434599.1|	-	2.6e-95	319.9	5.7	2.6e-95	319.9	4.0	1.4	2	0	0	2	2	2	1	DNA	polymerase	family	B
DNA_pol_B_exo1	PF03104.14	gi|449067517|ref|YP_007434599.1|	-	2.3e-34	118.7	1.9	8.6e-34	116.8	1.3	1.9	1	1	0	1	1	1	1	DNA	polymerase	family	B,	exonuclease	domain
RNase_H_2	PF13482.1	gi|449067517|ref|YP_007434599.1|	-	1e-06	28.6	2.4	6.2e-06	26.1	0.0	3.4	4	1	0	4	4	4	1	RNase_H	superfamily
DNA_pol_B_exo2	PF10108.4	gi|449067517|ref|YP_007434599.1|	-	6.4e-06	25.8	0.0	1.6e-05	24.5	0.0	1.6	1	0	0	1	1	1	1	Predicted	3'-5'	exonuclease	related	to	the	exonuclease	domain	of	PolB
DUF2286	PF10051.4	gi|449067518|ref|YP_007434600.1|	-	4.4e-56	188.4	4.6	4.7e-56	188.3	3.2	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2286)
DUF1626	PF07788.6	gi|449067518|ref|YP_007434600.1|	-	0.081	12.7	0.0	0.16	11.7	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1626)
Plasmid_parti	PF01672.11	gi|449067518|ref|YP_007434600.1|	-	0.098	13.1	0.1	0.17	12.3	0.1	1.4	1	0	0	1	1	1	0	Putative	plasmid	partition	protein
DOT1	PF08123.8	gi|449067519|ref|YP_007434601.1|	-	2.5e-08	33.4	0.1	3.1e-07	29.9	0.1	2.0	1	1	0	1	1	1	1	Histone	methylation	protein	DOT1
Methyltransf_31	PF13847.1	gi|449067519|ref|YP_007434601.1|	-	8.3e-07	28.7	0.1	1.5e-06	27.8	0.1	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|449067519|ref|YP_007434601.1|	-	1.3e-06	28.9	0.0	2e-06	28.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|449067519|ref|YP_007434601.1|	-	1.1e-05	24.8	0.0	1.3e-05	24.6	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_4	PF02390.12	gi|449067519|ref|YP_007434601.1|	-	2.1e-05	23.6	0.0	2.5e-05	23.4	0.0	1.2	1	0	0	1	1	1	1	Putative	methyltransferase
PrmA	PF06325.8	gi|449067519|ref|YP_007434601.1|	-	3.8e-05	22.9	0.1	5e-05	22.5	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_25	PF13649.1	gi|449067519|ref|YP_007434601.1|	-	5.4e-05	23.5	0.0	7.7e-05	22.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|449067519|ref|YP_007434601.1|	-	0.00021	21.3	0.0	0.00026	20.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.15	gi|449067519|ref|YP_007434601.1|	-	0.0011	18.1	0.0	0.0014	17.7	0.0	1.1	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_11	PF08241.7	gi|449067519|ref|YP_007434601.1|	-	0.0022	18.4	0.0	0.0039	17.6	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|449067519|ref|YP_007434601.1|	-	0.003	17.1	0.0	0.0031	17.0	0.0	1.2	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
N6_Mtase	PF02384.11	gi|449067519|ref|YP_007434601.1|	-	0.0043	16.1	0.0	0.0053	15.8	0.0	1.2	1	0	0	1	1	1	1	N-6	DNA	Methylase
Methyltransf_12	PF08242.7	gi|449067519|ref|YP_007434601.1|	-	0.0044	17.4	0.1	0.011	16.2	0.0	1.8	1	1	0	1	1	1	1	Methyltransferase	domain
TehB	PF03848.9	gi|449067519|ref|YP_007434601.1|	-	0.0045	16.1	0.0	0.006	15.7	0.0	1.2	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
Methyltransf_32	PF13679.1	gi|449067519|ref|YP_007434601.1|	-	0.024	14.3	0.0	0.028	14.1	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
RrnaAD	PF00398.15	gi|449067519|ref|YP_007434601.1|	-	0.028	13.4	0.1	0.034	13.1	0.1	1.3	1	1	0	1	1	1	0	Ribosomal	RNA	adenine	dimethylase
DUF633	PF04816.7	gi|449067519|ref|YP_007434601.1|	-	0.034	13.5	0.1	0.12	11.6	0.0	1.8	1	1	1	2	2	2	0	Family	of	unknown	function	(DUF633)
Met_10	PF02475.11	gi|449067519|ref|YP_007434601.1|	-	0.055	13.0	0.1	0.065	12.8	0.1	1.2	1	0	0	1	1	1	0	Met-10+	like-protein
MetW	PF07021.7	gi|449067519|ref|YP_007434601.1|	-	0.071	12.4	0.0	0.08	12.3	0.0	1.3	1	0	0	1	1	1	0	Methionine	biosynthesis	protein	MetW
tRNA_U5-meth_tr	PF05958.6	gi|449067519|ref|YP_007434601.1|	-	0.087	11.4	0.0	0.12	10.9	0.0	1.1	1	0	0	1	1	1	0	tRNA	(Uracil-5-)-methyltransferase
UPF0020	PF01170.13	gi|449067519|ref|YP_007434601.1|	-	0.099	12.2	0.0	0.14	11.7	0.0	1.2	1	0	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
Methyltransf_23	PF13489.1	gi|449067519|ref|YP_007434601.1|	-	0.11	12.2	0.0	0.17	11.6	0.0	1.4	1	1	0	1	1	1	0	Methyltransferase	domain
CDP-OH_P_transf	PF01066.16	gi|449067521|ref|YP_007434603.1|	-	2.5e-12	46.9	12.0	1.2e-11	44.7	8.3	2.0	1	1	0	1	1	1	1	CDP-alcohol	phosphatidyltransferase
DNA_primase_lrg	PF04104.9	gi|449067522|ref|YP_007434604.1|	-	9.3e-06	25.1	3.2	0.00033	20.0	0.4	3.1	1	1	1	2	2	2	2	Eukaryotic	and	archaeal	DNA	primase,	large	subunit
DUF1456	PF07308.8	gi|449067522|ref|YP_007434604.1|	-	0.0065	16.4	0.9	5.3	7.1	0.1	3.3	3	0	0	3	3	3	2	Protein	of	unknown	function	(DUF1456)
tRNA-synt_1g	PF09334.6	gi|449067523|ref|YP_007434605.1|	-	6.5e-146	485.9	0.0	7.9e-146	485.6	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(M)
tRNA-synt_1	PF00133.17	gi|449067523|ref|YP_007434605.1|	-	2.8e-12	45.4	0.2	1.2e-05	23.5	0.0	3.0	2	1	1	3	3	3	2	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|449067523|ref|YP_007434605.1|	-	4.2e-05	23.3	0.0	8.7e-05	22.3	0.0	1.5	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
DZR	PF12773.2	gi|449067523|ref|YP_007434605.1|	-	0.024	14.4	2.8	0.047	13.5	2.0	1.5	1	0	0	1	1	1	0	Double	zinc	ribbon
UPF0547	PF10571.4	gi|449067523|ref|YP_007434605.1|	-	0.098	12.3	5.8	0.85	9.3	0.4	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zf-ribbon_3	PF13248.1	gi|449067523|ref|YP_007434605.1|	-	1.9	7.8	7.5	81	2.6	5.2	2.5	1	1	0	1	1	1	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|449067523|ref|YP_007434605.1|	-	3.3	7.3	6.3	6.1	6.4	0.2	2.6	2	0	0	2	2	2	0	zinc-ribbon	domain
V_ATPase_I	PF01496.14	gi|449067524|ref|YP_007434606.1|	-	8.2e-58	195.9	23.0	2e-56	191.3	16.0	2.6	1	1	0	1	1	1	1	V-type	ATPase	116kDa	subunit	family
DUF3450	PF11932.3	gi|449067524|ref|YP_007434606.1|	-	0.027	13.7	0.1	0.046	12.9	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3450)
DUF904	PF06005.7	gi|449067524|ref|YP_007434606.1|	-	0.045	14.0	3.3	0.073	13.3	0.6	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF904)
AKNA	PF12443.3	gi|449067524|ref|YP_007434606.1|	-	0.049	13.6	0.3	0.15	12.1	0.2	1.7	1	0	0	1	1	1	0	AT-hook-containing	transcription	factor
DUF4200	PF13863.1	gi|449067524|ref|YP_007434606.1|	-	0.17	11.8	10.6	0.14	12.0	2.3	3.1	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4200)
DUF972	PF06156.8	gi|449067524|ref|YP_007434606.1|	-	0.66	10.3	2.2	0.73	10.2	0.3	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF972)
ATP-synt_F	PF01990.12	gi|449067525|ref|YP_007434607.1|	-	2.5e-16	59.8	0.3	2.7e-16	59.7	0.2	1.0	1	0	0	1	1	1	1	ATP	synthase	(F/14-kDa)	subunit
DRTGG	PF07085.7	gi|449067525|ref|YP_007434607.1|	-	0.039	13.5	0.1	0.074	12.6	0.1	1.5	1	1	1	2	2	2	0	DRTGG	domain
vATP-synt_E	PF01991.13	gi|449067526|ref|YP_007434608.1|	-	3.6e-10	39.4	15.2	6.8e-09	35.2	10.5	2.2	1	1	0	1	1	1	1	ATP	synthase	(E/31	kDa)	subunit
DUF1657	PF07870.6	gi|449067526|ref|YP_007434608.1|	-	0.23	11.1	4.7	4	7.1	0.0	3.3	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF1657)
ATP-synt_B	PF00430.13	gi|449067526|ref|YP_007434608.1|	-	0.25	11.1	7.9	0.53	10.0	5.5	1.5	1	0	0	1	1	1	0	ATP	synthase	B/B'	CF(0)
DUF3853	PF12964.2	gi|449067526|ref|YP_007434608.1|	-	0.3	10.9	4.9	1.3	8.8	0.0	2.5	2	1	0	3	3	3	0	Protein	of	unknown	function	(DUF3853)
DinI	PF06183.8	gi|449067526|ref|YP_007434608.1|	-	0.93	9.5	8.6	23	5.0	1.1	4.2	1	1	3	4	4	4	0	DinI-like	family
DUF445	PF04286.7	gi|449067526|ref|YP_007434608.1|	-	0.97	8.8	9.7	4.1	6.8	2.9	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF445)
ATP-cone	PF03477.11	gi|449067526|ref|YP_007434608.1|	-	4.4	7.8	8.7	2.7	8.4	2.0	2.4	1	1	0	2	2	2	0	ATP	cone	domain
ATP-synt_ab	PF00006.20	gi|449067527|ref|YP_007434609.1|	-	1.3e-89	299.3	0.0	1.8e-89	298.9	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_C	PF00306.22	gi|449067527|ref|YP_007434609.1|	-	2e-18	66.8	1.3	3.8e-18	66.0	0.9	1.3	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	chain,	C	terminal	domain
ATP-synt_ab_N	PF02874.18	gi|449067527|ref|YP_007434609.1|	-	2.2e-11	43.7	1.7	2.2e-11	43.7	1.1	2.3	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
AAA_22	PF13401.1	gi|449067527|ref|YP_007434609.1|	-	0.0065	16.6	0.3	0.026	14.6	0.0	2.2	2	1	0	2	2	2	1	AAA	domain
PDZ	PF00595.19	gi|449067527|ref|YP_007434609.1|	-	0.078	13.1	0.1	0.48	10.6	0.1	2.2	2	0	0	2	2	2	0	PDZ	domain	(Also	known	as	DHR	or	GLGF)
SRP54	PF00448.17	gi|449067527|ref|YP_007434609.1|	-	0.17	11.3	0.1	12	5.2	0.0	3.0	3	0	0	3	3	3	0	SRP54-type	protein,	GTPase	domain
Peptidase_M23	PF01551.17	gi|449067527|ref|YP_007434609.1|	-	0.17	11.9	0.0	2.6	8.1	0.0	2.3	2	0	0	2	2	2	0	Peptidase	family	M23
ATP-synt_ab	PF00006.20	gi|449067528|ref|YP_007434610.1|	-	6.5e-58	195.7	0.0	8.6e-58	195.3	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_C	PF00306.22	gi|449067528|ref|YP_007434610.1|	-	1.6e-12	47.8	0.0	3.4e-12	46.8	0.0	1.5	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	chain,	C	terminal	domain
ATP-synt_ab_N	PF02874.18	gi|449067528|ref|YP_007434610.1|	-	5.5e-10	39.3	0.6	1.1e-09	38.3	0.4	1.6	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
HAS-barrel	PF09378.5	gi|449067528|ref|YP_007434610.1|	-	0.0011	18.7	0.3	0.003	17.4	0.2	1.7	1	0	0	1	1	1	1	HAS	barrel	domain
PipA	PF07108.6	gi|449067528|ref|YP_007434610.1|	-	0.12	11.7	0.0	0.23	10.8	0.0	1.4	1	0	0	1	1	1	0	PipA	protein
ATP-synt_D	PF01813.12	gi|449067529|ref|YP_007434611.1|	-	2.5e-49	167.5	3.2	2.8e-49	167.3	2.2	1.0	1	0	0	1	1	1	1	ATP	synthase	subunit	D
MAGE	PF01454.14	gi|449067529|ref|YP_007434611.1|	-	0.0011	18.2	0.1	0.0024	17.2	0.0	1.6	1	1	0	1	1	1	1	MAGE	family
ING	PF12998.2	gi|449067529|ref|YP_007434611.1|	-	0.22	11.8	2.8	0.63	10.3	0.1	2.4	2	1	0	2	2	2	0	Inhibitor	of	growth	proteins	N-terminal	histone-binding
ATP-synt_E_2	PF08112.6	gi|449067530|ref|YP_007434612.1|	-	8.2e-16	57.8	8.5	8.7e-16	57.7	5.9	1.0	1	0	0	1	1	1	1	ATP	synthase	epsilon	subunit
ATP-synt_B	PF00430.13	gi|449067530|ref|YP_007434612.1|	-	0.0029	17.3	2.1	0.003	17.3	1.5	1.0	1	0	0	1	1	1	1	ATP	synthase	B/B'	CF(0)
FliG_M	PF14841.1	gi|449067530|ref|YP_007434612.1|	-	0.042	13.8	0.2	0.048	13.6	0.1	1.2	1	0	0	1	1	1	0	FliG	middle	domain
Spore_GerAC	PF05504.6	gi|449067530|ref|YP_007434612.1|	-	0.049	13.4	2.1	0.05	13.3	1.5	1.1	1	0	0	1	1	1	0	Spore	germination	B3/	GerAC	like,	C-terminal
DUF3144	PF11342.3	gi|449067530|ref|YP_007434612.1|	-	0.05	13.6	0.2	0.058	13.4	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3144)
LMP	PF04778.7	gi|449067530|ref|YP_007434612.1|	-	0.072	12.8	2.2	0.073	12.8	1.5	1.0	1	0	0	1	1	1	0	LMP	repeated	region
HALZ	PF02183.13	gi|449067530|ref|YP_007434612.1|	-	0.093	12.4	2.5	0.15	11.8	0.4	2.0	1	1	1	2	2	2	0	Homeobox	associated	leucine	zipper
HSCB_C	PF07743.8	gi|449067530|ref|YP_007434612.1|	-	0.12	12.8	0.9	0.15	12.5	0.6	1.4	1	1	0	1	1	1	0	HSCB	C-terminal	oligomerisation	domain
ACCA	PF03255.9	gi|449067530|ref|YP_007434612.1|	-	0.24	10.9	1.1	0.27	10.7	0.8	1.1	1	0	0	1	1	1	0	Acetyl	co-enzyme	A	carboxylase	carboxyltransferase	alpha	subunit
ATP-synt_C	PF00137.16	gi|449067531|ref|YP_007434613.1|	-	3.7e-16	58.7	20.9	3.7e-16	58.7	14.5	1.9	1	1	1	2	2	2	1	ATP	synthase	subunit	C
Yip1	PF04893.12	gi|449067531|ref|YP_007434613.1|	-	7	6.1	13.5	8.4	5.8	9.4	1.1	1	0	0	1	1	1	0	Yip1	domain
tRNA-synt_2b	PF00587.20	gi|449067532|ref|YP_007434614.1|	-	3.5e-25	88.5	0.5	6.5e-25	87.6	0.3	1.4	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|449067532|ref|YP_007434614.1|	-	1e-18	67.0	0.5	2.9e-18	65.5	0.3	1.8	1	0	0	1	1	1	1	Anticodon	binding	domain
ProRS-C_1	PF09180.6	gi|449067532|ref|YP_007434614.1|	-	1.2e-18	66.7	1.7	1.5e-18	66.4	0.4	1.8	2	0	0	2	2	2	1	Prolyl-tRNA	synthetase,	C-terminal
tRNA-synt_2	PF00152.15	gi|449067532|ref|YP_007434614.1|	-	0.067	11.9	0.1	0.2	10.4	0.1	1.8	1	0	0	1	1	1	0	tRNA	synthetases	class	II	(D,	K	and	N)
UPF0150	PF03681.10	gi|449067532|ref|YP_007434614.1|	-	0.085	12.5	0.5	0.42	10.2	0.0	2.1	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0150)
Ribosomal_S26e	PF01283.14	gi|449067533|ref|YP_007434615.1|	-	1.2e-29	102.8	2.5	1.3e-29	102.7	1.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S26e
zf-dskA_traR	PF01258.12	gi|449067533|ref|YP_007434615.1|	-	0.017	14.8	5.3	0.05	13.3	0.3	2.3	2	0	0	2	2	2	0	Prokaryotic	dksA/traR	C4-type	zinc	finger
DUF2116	PF09889.4	gi|449067533|ref|YP_007434615.1|	-	0.068	12.9	0.7	0.068	12.9	0.5	2.1	3	0	0	3	3	3	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
Cys_rich_CWC	PF14375.1	gi|449067533|ref|YP_007434615.1|	-	0.13	12.1	2.1	0.23	11.3	1.4	1.5	1	1	0	1	1	1	0	Cysteine-rich	CWC
Yippee-Mis18	PF03226.9	gi|449067533|ref|YP_007434615.1|	-	0.21	11.6	2.6	6.1	6.9	2.1	2.0	1	1	1	2	2	2	0	Yippee	zinc-binding/DNA-binding	/Mis18,	centromere	assembly
DZR	PF12773.2	gi|449067533|ref|YP_007434615.1|	-	0.23	11.2	5.8	1.3	8.8	4.0	2.0	1	1	0	1	1	1	0	Double	zinc	ribbon
HECT_2	PF09814.4	gi|449067533|ref|YP_007434615.1|	-	0.27	9.9	1.2	0.8	8.3	0.1	1.8	1	1	1	2	2	2	0	HECT-like	Ubiquitin-conjugating	enzyme	(E2)-binding
Auto_anti-p27	PF06677.7	gi|449067533|ref|YP_007434615.1|	-	0.32	10.8	3.2	8.2	6.2	0.2	2.5	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
SOR_SNZ	PF01680.12	gi|449067534|ref|YP_007434616.1|	-	3.3e-97	324.1	2.3	4.5e-97	323.6	1.6	1.2	1	0	0	1	1	1	1	SOR/SNZ	family
ThiG	PF05690.9	gi|449067534|ref|YP_007434616.1|	-	4e-06	26.1	3.2	3e-05	23.2	0.1	2.5	3	0	0	3	3	3	1	Thiazole	biosynthesis	protein	ThiG
IGPS	PF00218.16	gi|449067534|ref|YP_007434616.1|	-	0.0016	17.5	0.0	0.044	12.8	0.0	2.2	2	0	0	2	2	2	1	Indole-3-glycerol	phosphate	synthase
NMO	PF03060.10	gi|449067534|ref|YP_007434616.1|	-	0.0032	16.6	2.9	0.017	14.3	0.1	2.5	2	1	1	3	3	3	1	Nitronate	monooxygenase
NanE	PF04131.9	gi|449067534|ref|YP_007434616.1|	-	0.0082	15.1	0.1	0.13	11.1	0.0	2.2	2	0	0	2	2	2	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
OMPdecase	PF00215.19	gi|449067534|ref|YP_007434616.1|	-	0.013	14.9	0.1	2.7	7.3	0.0	2.5	2	1	1	3	3	3	0	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
Leu_Phe_trans	PF03588.9	gi|449067534|ref|YP_007434616.1|	-	0.016	14.3	0.0	0.033	13.3	0.0	1.4	1	0	0	1	1	1	0	Leucyl/phenylalanyl-tRNA	protein	transferase
His_biosynth	PF00977.16	gi|449067534|ref|YP_007434616.1|	-	0.021	14.1	0.8	1.7	7.8	0.0	2.9	2	1	1	3	3	3	0	Histidine	biosynthesis	protein
Dus	PF01207.12	gi|449067534|ref|YP_007434616.1|	-	0.022	13.5	0.1	1.4	7.6	0.0	2.3	2	0	0	2	2	2	0	Dihydrouridine	synthase	(Dus)
Trp_syntA	PF00290.15	gi|449067534|ref|YP_007434616.1|	-	0.023	13.2	0.0	0.041	12.4	0.0	1.3	1	0	0	1	1	1	0	Tryptophan	synthase	alpha	chain
SNO	PF01174.14	gi|449067535|ref|YP_007434617.1|	-	4.5e-48	163.3	0.1	5e-48	163.2	0.0	1.0	1	0	0	1	1	1	1	SNO	glutamine	amidotransferase	family
GATase_3	PF07685.9	gi|449067535|ref|YP_007434617.1|	-	1.4e-10	40.9	0.5	7.3e-10	38.6	0.4	2.2	1	1	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
Peptidase_S51	PF03575.12	gi|449067535|ref|YP_007434617.1|	-	2.2e-06	27.5	0.0	2.8e-06	27.1	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	S51
GATase	PF00117.23	gi|449067535|ref|YP_007434617.1|	-	3.1e-06	26.7	0.4	3.5e-05	23.3	0.3	2.0	1	1	0	1	1	1	1	Glutamine	amidotransferase	class-I
DJ-1_PfpI	PF01965.19	gi|449067535|ref|YP_007434617.1|	-	0.019	14.4	0.0	0.027	13.9	0.0	1.3	1	0	0	1	1	1	0	DJ-1/PfpI	family
Peptidase_C26	PF07722.8	gi|449067535|ref|YP_007434617.1|	-	0.036	13.4	0.9	0.83	9.0	0.6	2.7	1	1	0	1	1	1	0	Peptidase	C26
DUF4066	PF13278.1	gi|449067535|ref|YP_007434617.1|	-	0.13	11.5	0.0	0.24	10.6	0.0	1.4	1	0	0	1	1	1	0	Putative	amidotransferase
T2SE	PF00437.15	gi|449067536|ref|YP_007434618.1|	-	8.7e-13	47.7	0.0	1.6e-12	46.9	0.0	1.4	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_17	PF13207.1	gi|449067536|ref|YP_007434618.1|	-	8.9e-05	23.2	0.1	0.00051	20.8	0.0	2.4	3	0	0	3	3	1	1	AAA	domain
AAA_18	PF13238.1	gi|449067536|ref|YP_007434618.1|	-	0.00034	20.9	0.2	0.0035	17.6	0.0	2.9	3	1	0	3	3	2	1	AAA	domain
AAA_22	PF13401.1	gi|449067536|ref|YP_007434618.1|	-	0.00061	19.9	0.2	0.025	14.6	0.0	2.6	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|449067536|ref|YP_007434618.1|	-	0.0021	18.0	0.0	0.029	14.3	0.0	2.4	3	0	0	3	3	2	1	AAA	ATPase	domain
AAA_25	PF13481.1	gi|449067536|ref|YP_007434618.1|	-	0.0024	17.2	0.0	0.0065	15.8	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
Sigma54_activ_2	PF14532.1	gi|449067536|ref|YP_007434618.1|	-	0.0024	17.9	0.0	0.0082	16.1	0.0	1.8	1	1	1	2	2	2	1	Sigma-54	interaction	domain
AAA_14	PF13173.1	gi|449067536|ref|YP_007434618.1|	-	0.0027	17.6	0.4	0.49	10.2	0.0	3.3	3	1	0	3	3	3	1	AAA	domain
RuvB_N	PF05496.7	gi|449067536|ref|YP_007434618.1|	-	0.0034	16.4	0.3	0.016	14.2	0.0	2.2	3	0	0	3	3	3	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_5	PF07728.9	gi|449067536|ref|YP_007434618.1|	-	0.0038	16.9	0.2	0.017	14.8	0.0	2.2	2	1	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA	PF00004.24	gi|449067536|ref|YP_007434618.1|	-	0.0047	17.1	0.1	0.019	15.1	0.0	2.1	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
IstB_IS21	PF01695.12	gi|449067536|ref|YP_007434618.1|	-	0.0061	15.9	0.0	0.016	14.6	0.0	1.6	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
DnaB_C	PF03796.10	gi|449067536|ref|YP_007434618.1|	-	0.0093	14.8	0.1	0.049	12.5	0.0	2.0	2	0	0	2	2	2	1	DnaB-like	helicase	C	terminal	domain
Lon_C	PF05362.8	gi|449067536|ref|YP_007434618.1|	-	0.01	15.1	0.1	0.029	13.6	0.0	1.8	1	1	1	2	2	2	0	Lon	protease	(S16)	C-terminal	proteolytic	domain
AAA_19	PF13245.1	gi|449067536|ref|YP_007434618.1|	-	0.013	15.2	0.0	0.031	14.0	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_33	PF13671.1	gi|449067536|ref|YP_007434618.1|	-	0.014	15.2	0.0	0.04	13.7	0.0	1.8	2	0	0	2	2	1	0	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|449067536|ref|YP_007434618.1|	-	0.017	14.6	0.0	0.029	13.8	0.0	1.3	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
NACHT	PF05729.7	gi|449067536|ref|YP_007434618.1|	-	0.017	14.7	0.2	0.057	13.0	0.0	2.0	2	0	0	2	2	2	0	NACHT	domain
AAA_28	PF13521.1	gi|449067536|ref|YP_007434618.1|	-	0.023	14.6	0.0	0.05	13.5	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
NTPase_1	PF03266.10	gi|449067536|ref|YP_007434618.1|	-	0.041	13.5	0.2	0.25	11.0	0.0	2.4	2	0	0	2	2	2	0	NTPase
Zeta_toxin	PF06414.7	gi|449067536|ref|YP_007434618.1|	-	0.042	12.9	0.0	0.084	11.9	0.0	1.5	1	0	0	1	1	1	0	Zeta	toxin
Sigma54_activat	PF00158.21	gi|449067536|ref|YP_007434618.1|	-	0.046	13.1	0.0	0.12	11.8	0.0	1.6	1	0	0	1	1	1	0	Sigma-54	interaction	domain
SRP54	PF00448.17	gi|449067536|ref|YP_007434618.1|	-	0.054	12.9	0.0	0.1	12.0	0.0	1.4	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
PNK3P	PF08645.6	gi|449067536|ref|YP_007434618.1|	-	0.09	12.2	0.7	12	5.2	0.0	2.9	2	1	0	2	2	2	0	Polynucleotide	kinase	3	phosphatase
Mg_chelatase	PF01078.16	gi|449067536|ref|YP_007434618.1|	-	0.11	11.6	0.0	0.31	10.1	0.0	1.7	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
Hjc	PF01870.13	gi|449067537|ref|YP_007434619.1|	-	4.3e-25	87.1	0.2	5.7e-25	86.7	0.1	1.2	1	0	0	1	1	1	1	Archaeal	holliday	junction	resolvase	(hjc)
VRR_NUC	PF08774.6	gi|449067537|ref|YP_007434619.1|	-	0.06	13.3	0.0	0.1	12.6	0.0	1.4	1	0	0	1	1	1	0	VRR-NUC	domain
NERD	PF08378.6	gi|449067537|ref|YP_007434619.1|	-	0.067	13.4	0.0	0.082	13.1	0.0	1.2	1	0	0	1	1	1	0	Nuclease-related	domain
ABC_sub_bind	PF04392.7	gi|449067537|ref|YP_007434619.1|	-	0.11	11.4	0.0	0.16	10.9	0.0	1.2	1	0	0	1	1	1	0	ABC	transporter	substrate	binding	protein
TrbH	PF07283.6	gi|449067537|ref|YP_007434619.1|	-	0.12	12.2	0.0	0.15	11.8	0.0	1.3	1	0	0	1	1	1	0	Conjugal	transfer	protein	TrbH
IlvN	PF07991.7	gi|449067538|ref|YP_007434620.1|	-	9.4e-71	236.5	0.0	1.5e-70	235.8	0.0	1.3	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
IlvC	PF01450.14	gi|449067538|ref|YP_007434620.1|	-	8.8e-45	152.1	1.4	1.3e-44	151.6	1.0	1.2	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
2-Hacid_dh_C	PF02826.14	gi|449067538|ref|YP_007434620.1|	-	2.3e-06	26.8	0.0	4.6e-06	25.8	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.12	gi|449067538|ref|YP_007434620.1|	-	2.4e-06	27.8	0.0	8.8e-06	26.0	0.0	1.9	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_2	PF03446.10	gi|449067538|ref|YP_007434620.1|	-	1.7e-05	24.6	0.0	6.4e-05	22.8	0.0	1.9	2	1	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
AdoHcyase_NAD	PF00670.16	gi|449067538|ref|YP_007434620.1|	-	3.9e-05	23.5	0.0	0.00023	21.0	0.0	2.0	2	0	0	2	2	2	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
NAD_Gly3P_dh_N	PF01210.18	gi|449067538|ref|YP_007434620.1|	-	0.0014	18.3	0.0	1.6	8.4	0.0	2.5	2	0	0	2	2	2	2	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Oxidored_nitro	PF00148.14	gi|449067538|ref|YP_007434620.1|	-	0.021	13.5	0.0	0.16	10.5	0.0	2.1	1	1	0	1	1	1	0	Nitrogenase	component	1	type	Oxidoreductase
ApbA	PF02558.11	gi|449067538|ref|YP_007434620.1|	-	0.032	13.6	0.0	0.067	12.6	0.0	1.6	1	1	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
ACT_5	PF13710.1	gi|449067539|ref|YP_007434621.1|	-	0.00027	20.6	0.0	0.00042	20.0	0.0	1.3	1	0	0	1	1	1	1	ACT	domain
TPP_enzyme_N	PF02776.13	gi|449067540|ref|YP_007434622.1|	-	2.3e-57	193.2	0.0	5.1e-56	188.8	0.0	2.3	2	1	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|449067540|ref|YP_007434622.1|	-	3.3e-47	159.8	0.0	3e-45	153.5	0.0	2.6	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.17	gi|449067540|ref|YP_007434622.1|	-	7.5e-36	122.9	0.0	2.7e-35	121.0	0.0	2.0	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	central	domain
POR_N	PF01855.14	gi|449067540|ref|YP_007434622.1|	-	6.6e-05	22.5	0.0	0.00013	21.5	0.0	1.5	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Acid_PPase	PF12689.2	gi|449067541|ref|YP_007434623.1|	-	1.6e-11	44.1	0.1	2.6e-11	43.4	0.1	1.3	1	1	0	1	1	1	1	Acid	Phosphatase
HAD_2	PF13419.1	gi|449067541|ref|YP_007434623.1|	-	0.0012	19.0	0.1	0.0039	17.4	0.0	1.7	1	1	1	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
NIF	PF03031.13	gi|449067541|ref|YP_007434623.1|	-	0.0019	17.8	1.2	0.0025	17.5	0.8	1.2	1	0	0	1	1	1	1	NLI	interacting	factor-like	phosphatase
Hydrolase	PF00702.21	gi|449067541|ref|YP_007434623.1|	-	0.0032	17.8	0.1	1.5	9.1	0.0	2.2	1	1	1	2	2	2	2	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.2	gi|449067541|ref|YP_007434623.1|	-	0.17	12.0	0.3	4.6	7.3	0.0	2.1	1	1	1	2	2	2	0	haloacid	dehalogenase-like	hydrolase
PRD	PF00874.15	gi|449067541|ref|YP_007434623.1|	-	0.58	10.3	4.0	1.6	8.9	0.2	2.7	3	0	0	3	3	3	0	PRD	domain
MMR_HSR1	PF01926.18	gi|449067542|ref|YP_007434624.1|	-	2.3e-16	59.8	0.6	4.4e-12	45.9	0.0	2.2	2	0	0	2	2	2	2	50S	ribosome-binding	GTPase
FeoB_N	PF02421.13	gi|449067542|ref|YP_007434624.1|	-	1.5e-09	37.3	0.2	7.1e-05	22.1	0.1	2.2	2	0	0	2	2	2	2	Ferrous	iron	transport	protein	B
Dynamin_N	PF00350.18	gi|449067542|ref|YP_007434624.1|	-	2.8e-06	27.2	1.1	0.018	14.8	0.0	2.9	2	1	1	4	4	4	2	Dynamin	family
DUF258	PF03193.11	gi|449067542|ref|YP_007434624.1|	-	3.3e-06	26.3	0.0	4.6e-06	25.9	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_17	PF13207.1	gi|449067542|ref|YP_007434624.1|	-	0.00034	21.4	0.6	0.0025	18.6	0.1	2.4	2	1	0	2	2	2	1	AAA	domain
GTP_EFTU	PF00009.22	gi|449067542|ref|YP_007434624.1|	-	0.00048	19.6	0.1	0.0085	15.5	0.0	2.2	2	0	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
6PF2K	PF01591.13	gi|449067542|ref|YP_007434624.1|	-	0.012	14.6	1.4	12	4.8	0.0	3.3	2	1	0	3	3	3	0	6-phosphofructo-2-kinase
Miro	PF08477.8	gi|449067542|ref|YP_007434624.1|	-	0.013	16.0	0.0	0.042	14.3	0.0	1.9	2	0	0	2	2	2	0	Miro-like	protein
Arf	PF00025.16	gi|449067542|ref|YP_007434624.1|	-	0.017	14.3	0.3	0.46	9.6	0.0	2.2	1	1	1	2	2	2	0	ADP-ribosylation	factor	family
PduV-EutP	PF10662.4	gi|449067542|ref|YP_007434624.1|	-	0.031	13.7	0.1	0.4	10.1	0.0	2.1	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
CARDB	PF07705.6	gi|449067543|ref|YP_007434625.1|	-	0.00023	21.1	0.5	0.0042	17.1	0.1	2.4	2	0	0	2	2	2	1	CARDB
Phlebovirus_NSM	PF07246.6	gi|449067543|ref|YP_007434625.1|	-	0.064	12.3	0.0	0.092	11.8	0.0	1.2	1	0	0	1	1	1	0	Phlebovirus	nonstructural	protein	NS-M
UbiA	PF01040.13	gi|449067544|ref|YP_007434626.1|	-	1.7e-42	145.4	21.8	2e-42	145.1	15.1	1.0	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
Cdd1	PF11731.3	gi|449067545|ref|YP_007434627.1|	-	0.057	13.3	0.0	0.07	13.0	0.0	1.2	1	0	0	1	1	1	0	Pathogenicity	locus
DUF2067	PF09840.4	gi|449067545|ref|YP_007434627.1|	-	0.097	12.1	0.1	0.097	12.1	0.1	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2067)
DUF1803	PF08820.5	gi|449067545|ref|YP_007434627.1|	-	0.13	12.0	0.0	0.15	11.7	0.0	1.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1803)
Pyr_redox_2	PF07992.9	gi|449067546|ref|YP_007434628.1|	-	0.0075	16.1	0.0	0.011	15.6	0.0	1.3	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
AdoMet_dc	PF02675.10	gi|449067547|ref|YP_007434629.1|	-	4.2e-32	110.2	0.0	4.6e-32	110.0	0.0	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	decarboxylase
DUF211	PF02680.9	gi|449067548|ref|YP_007434630.1|	-	2.8e-35	119.9	5.9	3.2e-35	119.7	4.1	1.0	1	0	0	1	1	1	1	Uncharacterized	ArCR,	COG1888
ATP_bind_3	PF01171.15	gi|449067549|ref|YP_007434631.1|	-	4.4e-08	32.8	0.0	6.8e-08	32.2	0.0	1.3	1	0	0	1	1	1	1	PP-loop	family
NAD_synthase	PF02540.12	gi|449067549|ref|YP_007434631.1|	-	0.0028	16.5	0.0	0.0036	16.2	0.0	1.2	1	0	0	1	1	1	1	NAD	synthase
DUF2024	PF09630.5	gi|449067549|ref|YP_007434631.1|	-	0.17	11.6	1.1	1.4	8.6	0.0	2.7	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF2024)
Cob_adeno_trans	PF01923.13	gi|449067550|ref|YP_007434632.1|	-	2.4e-51	173.7	0.0	2.8e-51	173.5	0.0	1.0	1	0	0	1	1	1	1	Cobalamin	adenosyltransferase
Spectrin	PF00435.16	gi|449067550|ref|YP_007434632.1|	-	0.041	14.1	0.4	0.47	10.7	0.1	2.3	2	0	0	2	2	2	0	Spectrin	repeat
FH2	PF02181.18	gi|449067550|ref|YP_007434632.1|	-	0.052	12.4	0.2	4.8	5.9	0.0	2.0	2	0	0	2	2	2	0	Formin	Homology	2	Domain
tRNA-synt_1	PF00133.17	gi|449067551|ref|YP_007434633.1|	-	5.9e-52	176.4	0.0	3e-51	174.1	0.0	2.1	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|449067551|ref|YP_007434633.1|	-	1.5e-20	73.4	0.3	3.3e-20	72.3	0.2	1.6	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.6	gi|449067551|ref|YP_007434633.1|	-	6.8e-14	51.3	0.3	1.8e-11	43.3	0.0	3.5	3	1	1	4	4	4	1	tRNA	synthetases	class	I	(M)
tRNA-synt_1_2	PF13603.1	gi|449067551|ref|YP_007434633.1|	-	1.1e-12	47.6	0.1	2.3e-12	46.6	0.0	1.5	1	0	0	1	1	1	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1e	PF01406.14	gi|449067551|ref|YP_007434633.1|	-	8.5e-09	34.9	0.0	2.4e-08	33.4	0.0	1.7	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1f	PF01921.13	gi|449067551|ref|YP_007434633.1|	-	0.0089	14.7	0.0	0.023	13.3	0.0	1.8	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(K)
HisK_N	PF09385.5	gi|449067552|ref|YP_007434634.1|	-	0.023	14.2	4.1	0.032	13.8	2.3	1.6	2	0	0	2	2	2	0	Histidine	kinase	N	terminal
Penicillinase_R	PF03965.11	gi|449067552|ref|YP_007434634.1|	-	0.024	14.7	0.2	0.049	13.7	0.1	1.6	2	0	0	2	2	2	0	Penicillinase	repressor
HrcA_DNA-bdg	PF03444.10	gi|449067552|ref|YP_007434634.1|	-	0.047	13.1	1.6	0.071	12.5	0.3	1.9	2	0	0	2	2	2	0	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
Aminotran_1_2	PF00155.16	gi|449067553|ref|YP_007434635.1|	-	2.6e-42	145.1	0.0	3e-42	144.8	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Tax	PF02959.11	gi|449067553|ref|YP_007434635.1|	-	0.037	13.5	0.1	0.066	12.6	0.0	1.4	1	0	0	1	1	1	0	HTLV	Tax
Beta_elim_lyase	PF01212.16	gi|449067553|ref|YP_007434635.1|	-	0.18	10.8	0.0	0.32	10.1	0.0	1.3	1	0	0	1	1	1	0	Beta-eliminating	lyase
HisG	PF01634.13	gi|449067554|ref|YP_007434636.1|	-	3e-53	179.7	0.1	4.5e-53	179.1	0.1	1.3	1	0	0	1	1	1	1	ATP	phosphoribosyltransferase
HisG_C	PF08029.6	gi|449067554|ref|YP_007434636.1|	-	1.4e-21	76.1	0.9	4.9e-21	74.4	0.2	2.1	2	0	0	2	2	2	1	HisG,	C-terminal	domain
His_biosynth	PF00977.16	gi|449067555|ref|YP_007434637.1|	-	1.4e-41	142.2	2.3	1.5e-41	142.1	1.6	1.0	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
PcrB	PF01884.12	gi|449067555|ref|YP_007434637.1|	-	7.9e-05	22.0	1.6	0.04	13.1	0.1	2.2	2	0	0	2	2	2	2	PcrB	family
IGPD	PF00475.13	gi|449067556|ref|YP_007434638.1|	-	7.8e-53	178.2	0.4	1.1e-52	177.7	0.3	1.2	1	0	0	1	1	1	1	Imidazoleglycerol-phosphate	dehydratase
His_biosynth	PF00977.16	gi|449067557|ref|YP_007434639.1|	-	1.9e-82	275.9	6.2	2.2e-82	275.7	4.3	1.0	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
PcrB	PF01884.12	gi|449067557|ref|YP_007434639.1|	-	0.00012	21.4	2.2	0.00029	20.1	0.4	2.3	2	1	1	3	3	3	1	PcrB	family
ThiG	PF05690.9	gi|449067557|ref|YP_007434639.1|	-	0.00022	20.4	2.7	0.001	18.1	0.3	2.1	2	0	0	2	2	2	1	Thiazole	biosynthesis	protein	ThiG
NMO	PF03060.10	gi|449067557|ref|YP_007434639.1|	-	0.00024	20.3	2.0	0.26	10.4	0.1	2.1	2	0	0	2	2	2	2	Nitronate	monooxygenase
TMP-TENI	PF02581.12	gi|449067557|ref|YP_007434639.1|	-	0.00033	19.8	0.4	0.22	10.5	0.1	2.2	2	0	0	2	2	2	2	Thiamine	monophosphate	synthase/TENI
Dus	PF01207.12	gi|449067557|ref|YP_007434639.1|	-	0.0027	16.5	0.1	0.22	10.3	0.0	2.2	1	1	1	2	2	2	2	Dihydrouridine	synthase	(Dus)
DHO_dh	PF01180.16	gi|449067557|ref|YP_007434639.1|	-	0.045	12.7	2.3	0.74	8.7	0.1	2.2	2	0	0	2	2	2	0	Dihydroorotate	dehydrogenase
FMN_dh	PF01070.13	gi|449067557|ref|YP_007434639.1|	-	0.064	12.0	1.0	0.18	10.6	0.2	2.0	2	1	1	3	3	3	0	FMN-dependent	dehydrogenase
G3P_antiterm	PF04309.7	gi|449067557|ref|YP_007434639.1|	-	0.076	12.0	0.8	1.4	7.8	0.1	2.1	2	0	0	2	2	2	0	Glycerol-3-phosphate	responsive	antiterminator
Histidinol_dh	PF00815.15	gi|449067558|ref|YP_007434640.1|	-	3.8e-110	368.3	0.1	1.5e-109	366.3	0.1	1.7	1	1	0	1	1	1	1	Histidinol	dehydrogenase
PRA-PH	PF01503.12	gi|449067559|ref|YP_007434641.1|	-	2.6e-10	40.4	0.4	3.2e-10	40.1	0.3	1.2	1	1	0	1	1	1	1	Phosphoribosyl-ATP	pyrophosphohydrolase
GATase	PF00117.23	gi|449067560|ref|YP_007434642.1|	-	5.5e-28	97.7	0.0	6.7e-28	97.4	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
GATase_3	PF07685.9	gi|449067560|ref|YP_007434642.1|	-	0.0039	16.7	0.1	0.0082	15.7	0.0	1.5	2	0	0	2	2	2	1	CobB/CobQ-like	glutamine	amidotransferase	domain
PRA-CH	PF01502.13	gi|449067561|ref|YP_007434643.1|	-	2.5e-33	113.5	0.2	4.1e-33	112.8	0.1	1.3	1	0	0	1	1	1	1	Phosphoribosyl-AMP	cyclohydrolase
DUF59	PF01883.14	gi|449067562|ref|YP_007434644.1|	-	6e-18	64.5	0.2	8.3e-18	64.1	0.1	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF59
HTH_34	PF13601.1	gi|449067562|ref|YP_007434644.1|	-	0.094	12.7	0.0	0.2	11.6	0.0	1.5	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
tRNA-synt_2b	PF00587.20	gi|449067563|ref|YP_007434645.1|	-	1.1e-35	122.7	0.0	2.2e-35	121.7	0.0	1.5	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
Seryl_tRNA_N	PF02403.17	gi|449067563|ref|YP_007434645.1|	-	3.7e-25	88.0	12.5	7.3e-25	87.0	8.7	1.5	1	0	0	1	1	1	1	Seryl-tRNA	synthetase	N-terminal	domain
ALIX_LYPXL_bnd	PF13949.1	gi|449067563|ref|YP_007434645.1|	-	0.0017	17.3	7.3	0.002	17.1	4.5	1.5	2	0	0	2	2	2	1	ALIX	V-shaped	domain	binding	to	HIV
Takusan	PF04822.8	gi|449067563|ref|YP_007434645.1|	-	0.021	14.5	1.4	0.021	14.5	0.9	2.0	2	0	0	2	2	2	0	Takusan
DUF342	PF03961.8	gi|449067563|ref|YP_007434645.1|	-	0.05	12.0	1.8	0.082	11.3	1.3	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
DUF2205	PF10224.4	gi|449067563|ref|YP_007434645.1|	-	0.078	12.5	7.4	0.11	12.1	4.0	2.1	1	1	0	1	1	1	0	Predicted	coiled-coil	protein	(DUF2205)
Radical_SAM	PF04055.16	gi|449067564|ref|YP_007434646.1|	-	3.2e-17	63.1	0.1	2.5e-16	60.2	0.0	2.2	2	0	0	2	2	2	1	Radical	SAM	superfamily
B12-binding	PF02310.14	gi|449067564|ref|YP_007434646.1|	-	0.092	12.6	0.0	0.82	9.5	0.0	2.1	1	1	0	1	1	1	0	B12	binding	domain
DUF2387	PF09526.5	gi|449067566|ref|YP_007434648.1|	-	0.0034	17.2	1.8	0.0042	16.9	1.1	1.4	1	1	0	1	1	1	1	Probable	metal-binding	protein	(DUF2387)
AsnC_trans_reg	PF01037.16	gi|449067567|ref|YP_007434649.1|	-	2.5e-19	68.7	0.4	3.7e-19	68.2	0.3	1.3	1	0	0	1	1	1	1	AsnC	family
HTH_24	PF13412.1	gi|449067567|ref|YP_007434649.1|	-	9.8e-14	50.4	0.6	1.6e-12	46.6	0.4	2.3	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|449067567|ref|YP_007434649.1|	-	1.8e-11	43.4	1.0	6.3e-11	41.6	1.0	1.7	2	0	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
HTH_11	PF08279.7	gi|449067567|ref|YP_007434649.1|	-	2.2e-06	27.2	0.0	4e-06	26.3	0.0	1.5	1	0	0	1	1	1	1	HTH	domain
HTH_23	PF13384.1	gi|449067567|ref|YP_007434649.1|	-	0.00024	20.6	0.0	0.00042	19.8	0.0	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
MarR_2	PF12802.2	gi|449067567|ref|YP_007434649.1|	-	0.00033	20.2	0.1	0.00056	19.5	0.1	1.3	1	0	0	1	1	1	1	MarR	family
GntR	PF00392.16	gi|449067567|ref|YP_007434649.1|	-	0.00066	19.0	0.1	0.00099	18.5	0.1	1.2	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
TrmB	PF01978.14	gi|449067567|ref|YP_007434649.1|	-	0.00092	18.8	0.1	0.0018	17.9	0.1	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_28	PF13518.1	gi|449067567|ref|YP_007434649.1|	-	0.0011	18.8	0.0	0.002	18.1	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|449067567|ref|YP_007434649.1|	-	0.0012	18.6	0.1	0.0024	17.7	0.0	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_10	PF04967.7	gi|449067567|ref|YP_007434649.1|	-	0.002	17.6	0.0	0.0035	16.8	0.0	1.4	1	0	0	1	1	1	1	HTH	DNA	binding	domain
HTH_Tnp_ISL3	PF13542.1	gi|449067567|ref|YP_007434649.1|	-	0.0028	16.7	0.0	0.0053	15.8	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_DeoR	PF08220.7	gi|449067567|ref|YP_007434649.1|	-	0.0065	15.9	0.1	0.017	14.6	0.0	1.7	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
HTH_8	PF02954.14	gi|449067567|ref|YP_007434649.1|	-	0.0069	15.9	0.3	0.012	15.1	0.2	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	Fis	family
Rrf2	PF02082.15	gi|449067567|ref|YP_007434649.1|	-	0.0075	16.3	0.1	0.015	15.4	0.0	1.5	1	0	0	1	1	1	1	Transcriptional	regulator
MarR	PF01047.17	gi|449067567|ref|YP_007434649.1|	-	0.009	15.6	0.1	0.019	14.6	0.1	1.5	1	0	0	1	1	1	1	MarR	family
PCI	PF01399.22	gi|449067567|ref|YP_007434649.1|	-	0.013	15.7	0.1	0.039	14.2	0.0	1.7	2	0	0	2	2	2	0	PCI	domain
HTH_IclR	PF09339.5	gi|449067567|ref|YP_007434649.1|	-	0.019	14.5	0.1	0.028	14.0	0.1	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
NUMOD1	PF07453.8	gi|449067567|ref|YP_007434649.1|	-	0.02	14.7	0.1	6.9	6.6	0.0	3.3	3	0	0	3	3	3	0	NUMOD1	domain
HTH_Mga	PF08280.6	gi|449067567|ref|YP_007434649.1|	-	0.028	14.1	0.2	0.058	13.1	0.1	1.5	1	0	0	1	1	1	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_38	PF13936.1	gi|449067567|ref|YP_007434649.1|	-	0.028	13.9	0.1	0.054	13.0	0.1	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
B-block_TFIIIC	PF04182.7	gi|449067567|ref|YP_007434649.1|	-	0.036	13.8	0.0	0.087	12.6	0.0	1.7	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
HTH_27	PF13463.1	gi|449067567|ref|YP_007434649.1|	-	0.047	14.0	0.1	0.18	12.1	0.0	1.9	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
HTH_30	PF13556.1	gi|449067567|ref|YP_007434649.1|	-	0.051	13.1	0.1	0.088	12.4	0.0	1.3	1	0	0	1	1	1	0	PucR	C-terminal	helix-turn-helix	domain
LexA_DNA_bind	PF01726.11	gi|449067567|ref|YP_007434649.1|	-	0.069	12.7	0.0	0.14	11.7	0.0	1.4	1	0	0	1	1	1	0	LexA	DNA	binding	domain
Mga	PF05043.8	gi|449067567|ref|YP_007434649.1|	-	0.093	13.0	0.0	0.18	12.0	0.0	1.4	1	0	0	1	1	1	0	Mga	helix-turn-helix	domain
HTH_7	PF02796.10	gi|449067567|ref|YP_007434649.1|	-	0.094	12.5	0.0	0.31	10.9	0.0	1.9	1	1	1	2	2	2	0	Helix-turn-helix	domain	of	resolvase
TetR_C_9	PF14514.1	gi|449067567|ref|YP_007434649.1|	-	0.1	12.4	0.0	0.19	11.5	0.0	1.5	1	1	0	1	1	1	0	Transcriptional	regulator,	TetR,	C-terminal
HTH_psq	PF05225.11	gi|449067567|ref|YP_007434649.1|	-	0.1	12.1	0.0	0.17	11.4	0.0	1.3	1	0	0	1	1	1	0	helix-turn-helix,	Psq	domain
HTH_9	PF08221.6	gi|449067567|ref|YP_007434649.1|	-	0.11	12.3	0.1	0.24	11.3	0.0	1.6	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
NdhM	PF10664.4	gi|449067567|ref|YP_007434649.1|	-	0.12	12.2	0.0	0.24	11.3	0.0	1.6	1	1	0	1	1	1	0	Cyanobacterial	and	plastid	NDH-1	subunit	M
MarC	PF01914.12	gi|449067568|ref|YP_007434650.1|	-	3.9e-32	111.0	14.3	4.8e-32	110.7	9.9	1.1	1	0	0	1	1	1	1	MarC	family	integral	membrane	protein
DUF2976	PF11190.3	gi|449067568|ref|YP_007434650.1|	-	0.17	11.4	0.1	0.17	11.4	0.1	2.1	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2976)
DUF3087	PF11286.3	gi|449067568|ref|YP_007434650.1|	-	0.34	10.1	2.4	4.8	6.3	0.4	2.6	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3087)
DUF4233	PF14017.1	gi|449067568|ref|YP_007434650.1|	-	3.5	7.5	7.3	0.31	10.9	0.3	2.4	2	2	0	2	2	2	0	Protein	of	unknown	function	(DUF4233)
Vps53_N	PF04100.7	gi|449067569|ref|YP_007434651.1|	-	0.035	12.8	1.2	0.042	12.6	0.8	1.1	1	0	0	1	1	1	0	Vps53-like,	N-terminal
Sec8_exocyst	PF04048.9	gi|449067569|ref|YP_007434651.1|	-	0.056	13.0	1.5	0.079	12.5	1.0	1.3	1	1	0	1	1	1	0	Sec8	exocyst	complex	component	specific	domain
DNA_ligase_A_N	PF04675.9	gi|449067569|ref|YP_007434651.1|	-	0.07	12.9	0.4	0.11	12.3	0.2	1.4	1	1	0	1	1	1	0	DNA	ligase	N	terminus
Spc7	PF08317.6	gi|449067569|ref|YP_007434651.1|	-	0.092	11.3	3.6	0.1	11.2	2.5	1.2	1	0	0	1	1	1	0	Spc7	kinetochore	protein
RTX_C	PF08339.5	gi|449067569|ref|YP_007434651.1|	-	0.1	12.2	0.3	0.12	12.1	0.2	1.1	1	0	0	1	1	1	0	RTX	C-terminal	domain
DUF4208	PF13907.1	gi|449067569|ref|YP_007434651.1|	-	0.11	12.7	0.9	0.82	9.9	0.0	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4208)
Occludin_ELL	PF07303.8	gi|449067569|ref|YP_007434651.1|	-	0.14	12.9	1.4	0.23	12.2	0.7	1.5	1	1	0	1	1	1	0	Occludin	homology	domain
Sigma70_r1_1	PF03979.9	gi|449067569|ref|YP_007434651.1|	-	0.37	10.7	4.0	0.34	10.8	1.6	1.9	1	1	1	2	2	2	0	Sigma-70	factor,	region	1.1
Bacillus_HBL	PF05791.6	gi|449067569|ref|YP_007434651.1|	-	0.49	9.7	3.6	0.25	10.6	0.5	1.7	2	0	0	2	2	2	0	Bacillus	haemolytic	enterotoxin	(HBL)
SSB	PF00436.20	gi|449067570|ref|YP_007434652.1|	-	0.054	13.3	0.1	0.078	12.8	0.1	1.4	1	1	0	1	1	1	0	Single-strand	binding	protein	family
DHO_dh	PF01180.16	gi|449067571|ref|YP_007434653.1|	-	4.4e-46	157.1	0.6	5.5e-46	156.8	0.4	1.1	1	0	0	1	1	1	1	Dihydroorotate	dehydrogenase
NMO	PF03060.10	gi|449067571|ref|YP_007434653.1|	-	0.1	11.6	0.4	0.29	10.2	0.2	1.7	2	0	0	2	2	2	0	Nitronate	monooxygenase
Amidohydro_1	PF01979.15	gi|449067572|ref|YP_007434654.1|	-	3.6e-14	53.1	0.0	2.4e-06	27.4	0.0	2.1	2	0	0	2	2	2	2	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|449067572|ref|YP_007434654.1|	-	7e-10	39.3	0.0	6.3e-06	26.4	0.0	2.5	2	1	1	3	3	3	2	Amidohydrolase
Amidohydro_3	PF07969.6	gi|449067572|ref|YP_007434654.1|	-	0.0064	15.7	0.0	0.13	11.4	0.0	2.1	2	0	0	2	2	2	1	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|449067572|ref|YP_007434654.1|	-	0.05	13.4	0.3	0.12	12.2	0.0	1.8	2	0	0	2	2	2	0	Amidohydrolase
DHODB_Fe-S_bind	PF10418.4	gi|449067573|ref|YP_007434655.1|	-	0.00022	20.6	4.0	0.00038	19.8	2.8	1.4	1	0	0	1	1	1	1	Iron-sulfur	cluster	binding	domain	of	dihydroorotate	dehydrogenase	B
DUF4318	PF14201.1	gi|449067573|ref|YP_007434655.1|	-	0.12	12.1	0.4	0.46	10.3	0.0	2.1	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4318)
PyrI	PF01948.13	gi|449067574|ref|YP_007434656.1|	-	1.5e-36	124.3	4.5	5.6e-36	122.4	3.2	1.7	2	0	0	2	2	2	1	Aspartate	carbamoyltransferase	regulatory	chain,	allosteric	domain
PyrI_C	PF02748.10	gi|449067574|ref|YP_007434656.1|	-	1.3e-17	62.9	2.5	2.2e-17	62.2	1.7	1.4	1	0	0	1	1	1	1	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
TF_Zn_Ribbon	PF08271.7	gi|449067574|ref|YP_007434656.1|	-	0.96	8.8	4.7	3.4	7.0	3.2	2.0	1	1	0	1	1	1	0	TFIIB	zinc-binding
OTCace_N	PF02729.16	gi|449067575|ref|YP_007434657.1|	-	4.8e-43	146.2	0.0	8.2e-43	145.4	0.0	1.4	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
OTCace	PF00185.19	gi|449067575|ref|YP_007434657.1|	-	5.7e-33	114.0	0.0	9e-33	113.3	0.0	1.3	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
BRCT	PF00533.21	gi|449067575|ref|YP_007434657.1|	-	0.024	14.7	0.1	0.077	13.1	0.0	2.1	2	1	0	2	2	2	0	BRCA1	C	Terminus	(BRCT)	domain
Pribosyltran	PF00156.22	gi|449067576|ref|YP_007434658.1|	-	2.9e-20	72.2	1.7	5.3e-20	71.3	1.2	1.5	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.1	gi|449067576|ref|YP_007434658.1|	-	0.00011	21.4	0.0	0.00016	20.9	0.0	1.2	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
PRTase_2	PF15609.1	gi|449067576|ref|YP_007434658.1|	-	0.011	15.0	0.0	0.015	14.6	0.0	1.2	1	0	0	1	1	1	0	Phosphoribosyl	transferase
OMPdecase	PF00215.19	gi|449067577|ref|YP_007434659.1|	-	4.5e-21	75.2	0.0	5.6e-21	74.9	0.0	1.1	1	0	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
JAB	PF01398.16	gi|449067578|ref|YP_007434660.1|	-	0.025	14.2	0.0	0.067	12.9	0.0	1.8	1	1	0	1	1	1	0	JAB1/Mov34/MPN/PAD-1	ubiquitin	protease
Prok-JAB	PF14464.1	gi|449067578|ref|YP_007434660.1|	-	0.11	12.0	0.0	0.19	11.2	0.0	1.4	1	0	0	1	1	1	0	Prokaryotic	homologs	of	the	JAB	domain
FlaC_arch	PF05377.6	gi|449067578|ref|YP_007434660.1|	-	0.45	10.4	2.4	1.9	8.4	0.3	2.4	2	0	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
PhoU	PF01895.14	gi|449067579|ref|YP_007434661.1|	-	6.3e-21	74.6	6.5	2.7e-15	56.5	0.2	2.7	3	0	0	3	3	3	2	PhoU	domain
Antitoxin-MazE	PF04014.13	gi|449067579|ref|YP_007434661.1|	-	1.3e-10	40.7	0.1	6.3e-10	38.5	0.0	2.1	2	0	0	2	2	2	1	Antidote-toxin	recognition	MazE
DUF4007	PF13182.1	gi|449067579|ref|YP_007434661.1|	-	0.033	13.0	1.1	0.055	12.2	0.0	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4007)
FliW	PF02623.10	gi|449067579|ref|YP_007434661.1|	-	0.089	12.3	0.2	0.39	10.2	0.0	2.1	2	0	0	2	2	2	0	FliW	protein
Foie-gras_1	PF11817.3	gi|449067579|ref|YP_007434661.1|	-	0.11	11.9	0.1	0.18	11.2	0.1	1.3	1	0	0	1	1	1	0	Foie	gras	liver	health	family	1
HisK_N	PF09385.5	gi|449067579|ref|YP_007434661.1|	-	0.33	10.5	3.6	2.2	7.8	0.2	2.5	2	1	0	2	2	2	0	Histidine	kinase	N	terminal
DUF2106	PF09879.4	gi|449067580|ref|YP_007434662.1|	-	0.0042	16.4	0.1	0.0069	15.7	0.0	1.3	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2106)
DNA_pol3_gamma3	PF12169.3	gi|449067580|ref|YP_007434662.1|	-	0.088	12.5	0.0	0.15	11.8	0.0	1.4	1	0	0	1	1	1	0	DNA	polymerase	III	subunits	gamma	and	tau	domain	III
TYW3	PF02676.9	gi|449067582|ref|YP_007434664.1|	-	2.1e-47	160.8	0.0	2.5e-47	160.6	0.0	1.0	1	0	0	1	1	1	1	Methyltransferase	TYW3
Fer4_14	PF13394.1	gi|449067583|ref|YP_007434665.1|	-	7e-18	64.7	0.0	1.1e-17	64.1	0.0	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Radical_SAM	PF04055.16	gi|449067583|ref|YP_007434665.1|	-	2.3e-15	57.1	0.0	5.2e-15	55.9	0.0	1.6	1	1	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|449067583|ref|YP_007434665.1|	-	4.7e-11	42.9	0.0	7.2e-11	42.3	0.0	1.3	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
SIR2	PF02146.12	gi|449067583|ref|YP_007434665.1|	-	0.067	12.9	0.0	0.1	12.3	0.0	1.3	1	0	0	1	1	1	0	Sir2	family
MMR_HSR1	PF01926.18	gi|449067584|ref|YP_007434666.1|	-	6.1e-18	64.8	0.3	2.1e-17	63.1	0.1	2.0	2	1	0	2	2	2	1	50S	ribosome-binding	GTPase
NOG1	PF06858.9	gi|449067584|ref|YP_007434666.1|	-	1.1e-17	63.6	0.6	1.2e-16	60.2	0.1	2.3	2	0	0	2	2	2	1	Nucleolar	GTP-binding	protein	1	(NOG1)
FeoB_N	PF02421.13	gi|449067584|ref|YP_007434666.1|	-	7.3e-15	54.5	0.4	1e-14	54.0	0.3	1.2	1	0	0	1	1	1	1	Ferrous	iron	transport	protein	B
GTP_EFTU	PF00009.22	gi|449067584|ref|YP_007434666.1|	-	3.1e-06	26.7	0.2	0.00027	20.4	0.1	2.7	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
PduV-EutP	PF10662.4	gi|449067584|ref|YP_007434666.1|	-	3.7e-06	26.4	0.1	7.9e-06	25.4	0.1	1.6	1	0	0	1	1	1	1	Ethanolamine	utilisation	-	propanediol	utilisation
Gtr1_RagA	PF04670.7	gi|449067584|ref|YP_007434666.1|	-	5.1e-06	25.8	0.1	9.1e-06	24.9	0.0	1.4	1	0	0	1	1	1	1	Gtr1/RagA	G	protein	conserved	region
Dynamin_N	PF00350.18	gi|449067584|ref|YP_007434666.1|	-	6.7e-06	26.0	1.2	0.00016	21.5	0.1	2.4	1	1	1	2	2	2	1	Dynamin	family
Miro	PF08477.8	gi|449067584|ref|YP_007434666.1|	-	1.9e-05	25.1	0.0	3.4e-05	24.3	0.0	1.4	1	0	0	1	1	1	1	Miro-like	protein
AAA_14	PF13173.1	gi|449067584|ref|YP_007434666.1|	-	0.0026	17.6	2.6	0.78	9.6	0.0	3.3	3	0	0	3	3	3	1	AAA	domain
Arch_ATPase	PF01637.13	gi|449067584|ref|YP_007434666.1|	-	0.0027	17.4	1.7	0.11	12.1	0.0	2.8	3	1	0	3	3	3	1	Archaeal	ATPase
AIG1	PF04548.11	gi|449067584|ref|YP_007434666.1|	-	0.0045	16.1	0.1	0.0075	15.3	0.1	1.5	1	0	0	1	1	1	1	AIG1	family
DUF258	PF03193.11	gi|449067584|ref|YP_007434666.1|	-	0.0072	15.5	0.4	0.038	13.1	0.1	2.2	2	1	0	2	2	2	1	Protein	of	unknown	function,	DUF258
Ras	PF00071.17	gi|449067584|ref|YP_007434666.1|	-	0.018	14.4	0.1	0.055	12.8	0.0	1.8	1	1	0	1	1	1	0	Ras	family
NTPase_1	PF03266.10	gi|449067584|ref|YP_007434666.1|	-	0.021	14.5	0.2	0.14	11.8	0.0	2.3	2	0	0	2	2	2	0	NTPase
AAA_17	PF13207.1	gi|449067584|ref|YP_007434666.1|	-	0.026	15.3	0.0	0.091	13.5	0.0	2.1	1	1	0	1	1	1	0	AAA	domain
AAA_18	PF13238.1	gi|449067584|ref|YP_007434666.1|	-	0.043	14.1	0.1	0.17	12.1	0.0	2.2	1	1	0	1	1	1	0	AAA	domain
MobB	PF03205.9	gi|449067584|ref|YP_007434666.1|	-	0.07	12.8	0.0	0.14	11.8	0.0	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ATP_bind_1	PF03029.12	gi|449067584|ref|YP_007434666.1|	-	0.08	12.4	0.0	11	5.4	0.0	2.3	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
tRNA_bind	PF01588.15	gi|449067585|ref|YP_007434667.1|	-	1.9e-29	101.3	0.3	2.2e-29	101.1	0.2	1.0	1	0	0	1	1	1	1	Putative	tRNA	binding	domain
SAICAR_synt	PF01259.13	gi|449067586|ref|YP_007434668.1|	-	8.6e-54	182.2	0.7	1e-53	182.0	0.5	1.0	1	0	0	1	1	1	1	SAICAR	synthetase
PurS	PF02700.9	gi|449067587|ref|YP_007434669.1|	-	4.7e-21	74.5	0.3	5.3e-21	74.3	0.2	1.0	1	0	0	1	1	1	1	Phosphoribosylformylglycinamidine	(FGAM)	synthase
HORMA	PF02301.13	gi|449067587|ref|YP_007434669.1|	-	0.02	14.4	0.5	0.021	14.2	0.4	1.0	1	0	0	1	1	1	0	HORMA	domain
GATase_5	PF13507.1	gi|449067588|ref|YP_007434670.1|	-	7.9e-44	149.4	0.0	9.8e-44	149.2	0.0	1.0	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
GATase_3	PF07685.9	gi|449067588|ref|YP_007434670.1|	-	1.2e-09	37.9	0.0	1.5e-08	34.4	0.0	2.4	2	1	1	3	3	3	1	CobB/CobQ-like	glutamine	amidotransferase	domain
DJ-1_PfpI	PF01965.19	gi|449067588|ref|YP_007434670.1|	-	5.1e-09	35.7	0.0	9.8e-09	34.8	0.0	1.3	1	1	0	1	1	1	1	DJ-1/PfpI	family
GATase	PF00117.23	gi|449067588|ref|YP_007434670.1|	-	7.1e-08	32.1	0.0	1.4e-07	31.2	0.0	1.5	1	1	0	1	1	1	1	Glutamine	amidotransferase	class-I
DUF4066	PF13278.1	gi|449067588|ref|YP_007434670.1|	-	5e-05	22.6	0.0	8.1e-05	21.9	0.0	1.3	1	0	0	1	1	1	1	Putative	amidotransferase
AIRS_C	PF02769.17	gi|449067589|ref|YP_007434671.1|	-	1.4e-38	132.2	0.9	2.3e-25	89.4	0.2	2.2	2	0	0	2	2	2	2	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|449067589|ref|YP_007434671.1|	-	3.7e-35	120.0	0.3	6.4e-22	77.6	0.0	2.6	2	0	0	2	2	2	2	AIR	synthase	related	protein,	N-terminal	domain
Pribosyltran	PF00156.22	gi|449067590|ref|YP_007434672.1|	-	6.7e-16	58.1	0.3	1.7e-15	56.8	0.2	1.7	1	1	0	1	1	1	1	Phosphoribosyl	transferase	domain
GATase_2	PF00310.16	gi|449067590|ref|YP_007434672.1|	-	4.3e-13	48.7	0.0	1.6e-05	23.7	0.0	3.4	2	1	1	3	3	3	3	Glutamine	amidotransferases	class-II
GATase_6	PF13522.1	gi|449067590|ref|YP_007434672.1|	-	6.1e-13	48.8	0.0	1.6e-12	47.5	0.0	1.7	2	0	0	2	2	2	1	Glutamine	amidotransferase	domain
GATase_7	PF13537.1	gi|449067590|ref|YP_007434672.1|	-	8.9e-12	44.8	0.0	7.1e-11	41.9	0.0	2.2	1	1	0	1	1	1	1	Glutamine	amidotransferase	domain
Pribosyltran	PF00156.22	gi|449067591|ref|YP_007434673.1|	-	4.6e-15	55.4	0.2	8.5e-15	54.5	0.1	1.3	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
GATase_2	PF00310.16	gi|449067591|ref|YP_007434673.1|	-	0.0021	16.8	0.0	0.4	9.3	0.0	2.2	2	0	0	2	2	2	2	Glutamine	amidotransferases	class-II
PRTase_2	PF15609.1	gi|449067591|ref|YP_007434673.1|	-	0.0055	16.0	0.0	0.014	14.7	0.0	1.5	2	0	0	2	2	2	1	Phosphoribosyl	transferase
GATase_7	PF13537.1	gi|449067591|ref|YP_007434673.1|	-	0.0066	16.1	0.0	0.02	14.5	0.0	1.7	2	0	0	2	2	2	1	Glutamine	amidotransferase	domain
GARS_A	PF01071.14	gi|449067592|ref|YP_007434674.1|	-	1.7e-38	132.1	0.0	2.9e-38	131.4	0.0	1.4	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
GARS_N	PF02844.10	gi|449067592|ref|YP_007434674.1|	-	2.1e-23	82.6	0.1	4.5e-23	81.5	0.0	1.6	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	N	domain
GARS_C	PF02843.11	gi|449067592|ref|YP_007434674.1|	-	5.7e-10	39.2	0.0	1.5e-09	37.8	0.0	1.8	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	C	domain
ATP-grasp_4	PF13535.1	gi|449067592|ref|YP_007434674.1|	-	8.8e-10	38.6	0.0	1.8e-09	37.6	0.0	1.5	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|449067592|ref|YP_007434674.1|	-	1.1e-06	27.5	0.0	1.6e-06	27.1	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
CPSase_L_D2	PF02786.12	gi|449067592|ref|YP_007434674.1|	-	0.0001	21.6	0.0	0.00023	20.5	0.0	1.5	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Dala_Dala_lig_C	PF07478.8	gi|449067592|ref|YP_007434674.1|	-	0.017	14.5	0.2	0.046	13.1	0.1	1.7	1	1	0	1	1	1	0	D-ala	D-ala	ligase	C-terminus
DUF448	PF04296.8	gi|449067592|ref|YP_007434674.1|	-	0.018	14.6	0.0	0.054	13.1	0.0	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF448)
AIRS_C	PF02769.17	gi|449067593|ref|YP_007434675.1|	-	6.2e-25	87.9	0.0	9.4e-25	87.3	0.0	1.2	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|449067593|ref|YP_007434675.1|	-	3.9e-17	62.2	0.8	7.1e-17	61.4	0.5	1.4	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
DUF3505	PF12013.3	gi|449067594|ref|YP_007434676.1|	-	0.0066	16.6	0.1	0.0098	16.1	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3505)
DUF4120	PF13496.1	gi|449067594|ref|YP_007434676.1|	-	0.039	13.9	0.2	0.1	12.5	0.1	1.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4120)
PapB	PF03333.8	gi|449067594|ref|YP_007434676.1|	-	0.061	13.1	0.0	0.13	12.0	0.0	1.6	1	0	0	1	1	1	0	Adhesin	biosynthesis	transcription	regulatory	protein
DnaI_N	PF07319.6	gi|449067594|ref|YP_007434676.1|	-	0.066	13.4	0.1	0.15	12.3	0.0	1.6	1	0	0	1	1	1	0	Primosomal	protein	DnaI	N-terminus
TrbI_Ftype	PF09677.5	gi|449067594|ref|YP_007434676.1|	-	0.089	12.6	0.0	1.1	9.1	0.0	2.1	2	0	0	2	2	2	0	Type-F	conjugative	transfer	system	protein	(TrbI_Ftype)
RHH_1	PF01402.16	gi|449067595|ref|YP_007434677.1|	-	0.00046	19.9	0.0	0.00061	19.5	0.0	1.2	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
Arginosuc_synth	PF00764.14	gi|449067596|ref|YP_007434678.1|	-	4.9e-141	470.2	0.1	5.6e-141	470.0	0.0	1.0	1	0	0	1	1	1	1	Arginosuccinate	synthase
QueC	PF06508.8	gi|449067596|ref|YP_007434678.1|	-	0.00047	19.5	0.1	0.00087	18.6	0.1	1.6	1	1	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
Phage_30_8	PF06019.6	gi|449067596|ref|YP_007434678.1|	-	0.011	15.4	0.3	0.48	10.1	0.1	2.4	2	0	0	2	2	2	0	Phage	GP30.8	protein
Asn_synthase	PF00733.16	gi|449067596|ref|YP_007434678.1|	-	0.012	15.1	0.0	0.018	14.5	0.0	1.4	1	0	0	1	1	1	0	Asparagine	synthase
PAPS_reduct	PF01507.14	gi|449067596|ref|YP_007434678.1|	-	0.024	14.4	0.0	0.069	12.9	0.0	1.8	1	1	0	1	1	1	0	Phosphoadenosine	phosphosulfate	reductase	family
ThiI	PF02568.9	gi|449067596|ref|YP_007434678.1|	-	0.12	11.8	0.1	0.48	9.8	0.1	1.7	1	1	0	1	1	1	0	Thiamine	biosynthesis	protein	(ThiI)
Lyase_1	PF00206.15	gi|449067597|ref|YP_007434679.1|	-	4.9e-40	137.6	0.0	1e-39	136.5	0.0	1.6	2	0	0	2	2	2	1	Lyase
ASL_C2	PF14698.1	gi|449067597|ref|YP_007434679.1|	-	0.0017	18.3	0.0	0.0077	16.2	0.0	2.1	2	0	0	2	2	2	1	Argininosuccinate	lyase	C-terminal
CPSase_sm_chain	PF00988.17	gi|449067598|ref|YP_007434680.1|	-	2.2e-48	163.0	0.0	3.3e-48	162.4	0.0	1.3	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	small	chain,	CPSase	domain
GATase	PF00117.23	gi|449067598|ref|YP_007434680.1|	-	1.9e-37	128.5	0.0	3.1e-37	127.9	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|449067598|ref|YP_007434680.1|	-	2e-06	27.4	0.9	0.00023	20.6	0.7	2.2	1	1	0	1	1	1	1	Peptidase	C26
CPSase_L_D2	PF02786.12	gi|449067599|ref|YP_007434681.1|	-	1.8e-97	324.7	0.0	7.1e-66	221.5	0.0	2.3	2	0	0	2	2	2	2	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
CPSase_L_D3	PF02787.14	gi|449067599|ref|YP_007434681.1|	-	1.1e-38	131.8	0.1	2.5e-38	130.6	0.1	1.6	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
CPSase_L_chain	PF00289.17	gi|449067599|ref|YP_007434681.1|	-	1.3e-35	121.8	0.0	2.3e-19	69.5	0.0	2.6	2	0	0	2	2	2	2	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
ATP-grasp_4	PF13535.1	gi|449067599|ref|YP_007434681.1|	-	1.7e-29	102.9	0.0	2.5e-16	59.9	0.0	2.3	2	0	0	2	2	2	2	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|449067599|ref|YP_007434681.1|	-	2.3e-22	79.1	0.0	1.3e-12	47.1	0.0	4.2	3	1	0	3	3	3	3	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp	PF02222.17	gi|449067599|ref|YP_007434681.1|	-	2.7e-19	69.1	0.0	3.1e-09	36.4	0.0	2.3	2	0	0	2	2	2	2	ATP-grasp	domain
Dala_Dala_lig_C	PF07478.8	gi|449067599|ref|YP_007434681.1|	-	1.2e-14	54.2	0.1	4.6e-08	32.7	0.1	2.7	2	1	0	2	2	2	2	D-ala	D-ala	ligase	C-terminus
ATP-grasp_3	PF02655.9	gi|449067599|ref|YP_007434681.1|	-	2.8e-08	33.7	0.2	0.00072	19.4	0.1	3.2	2	2	0	2	2	2	2	ATP-grasp	domain
RimK	PF08443.6	gi|449067599|ref|YP_007434681.1|	-	1.6e-07	31.0	0.0	4.5e-05	23.0	0.0	2.7	2	0	0	2	2	2	1	RimK-like	ATP-grasp	domain
ATP-grasp_5	PF13549.1	gi|449067599|ref|YP_007434681.1|	-	9.6e-06	24.9	0.1	0.013	14.7	0.0	3.1	3	1	0	3	3	3	2	ATP-grasp	domain
GARS_A	PF01071.14	gi|449067599|ref|YP_007434681.1|	-	0.00047	19.7	0.1	0.038	13.5	0.0	2.9	2	1	0	2	2	2	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATP-grasp_2	PF08442.5	gi|449067599|ref|YP_007434681.1|	-	0.0038	16.6	0.0	0.14	11.5	0.0	3.1	4	0	0	4	4	4	1	ATP-grasp	domain
RimK	PF08443.6	gi|449067600|ref|YP_007434682.1|	-	7.2e-37	126.7	0.1	1.7e-36	125.4	0.0	1.6	2	0	0	2	2	2	1	RimK-like	ATP-grasp	domain
GSH-S_ATP	PF02955.11	gi|449067600|ref|YP_007434682.1|	-	1.7e-08	33.8	0.0	2.9e-08	33.0	0.0	1.3	1	0	0	1	1	1	1	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|449067600|ref|YP_007434682.1|	-	4.6e-07	28.8	0.0	6.2e-07	28.4	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp_3	PF02655.9	gi|449067600|ref|YP_007434682.1|	-	2.1e-06	27.6	0.0	3.6e-06	26.9	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|449067600|ref|YP_007434682.1|	-	4.8e-06	26.4	0.0	8.2e-06	25.6	0.0	1.5	1	1	0	1	1	1	1	ATP-grasp	domain
Dala_Dala_lig_C	PF07478.8	gi|449067600|ref|YP_007434682.1|	-	0.06	12.7	0.1	0.24	10.7	0.1	2.2	1	1	0	1	1	1	0	D-ala	D-ala	ligase	C-terminus
Translin	PF01997.11	gi|449067601|ref|YP_007434683.1|	-	1.4e-29	103.1	2.3	1.6e-29	102.9	1.6	1.1	1	0	0	1	1	1	1	Translin	family
HTH_Tnp_IS630	PF01710.11	gi|449067601|ref|YP_007434683.1|	-	0.011	15.3	0.4	0.41	10.3	0.1	2.6	2	1	1	3	3	3	0	Transposase
DUF2573	PF10835.3	gi|449067601|ref|YP_007434683.1|	-	0.028	14.4	0.1	0.11	12.5	0.1	1.9	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2573)
TPR_11	PF13414.1	gi|449067601|ref|YP_007434683.1|	-	0.032	13.8	2.5	1.1	9.0	0.2	2.6	2	0	0	2	2	2	0	TPR	repeat
XH	PF03469.9	gi|449067601|ref|YP_007434683.1|	-	0.042	13.5	0.6	0.23	11.1	0.0	2.0	2	0	0	2	2	2	0	XH	domain
TPR_2	PF07719.12	gi|449067601|ref|YP_007434683.1|	-	1.5	8.9	6.3	5.2	7.2	0.3	3.1	2	1	1	3	3	3	0	Tetratricopeptide	repeat
FlaC_arch	PF05377.6	gi|449067601|ref|YP_007434683.1|	-	5.2	7.0	5.6	8.9	6.2	1.6	2.7	2	1	1	3	3	3	0	Flagella	accessory	protein	C	(FlaC)
3HCDH_N	PF02737.13	gi|449067602|ref|YP_007434684.1|	-	1.1e-48	165.3	0.0	1.6e-48	164.7	0.0	1.3	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
3HCDH	PF00725.17	gi|449067602|ref|YP_007434684.1|	-	6.3e-16	58.5	0.1	1.3e-15	57.5	0.1	1.5	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
NAD_Gly3P_dh_N	PF01210.18	gi|449067602|ref|YP_007434684.1|	-	0.14	11.9	0.0	0.28	10.8	0.0	1.6	1	1	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Cupin_2	PF07883.6	gi|449067603|ref|YP_007434685.1|	-	1.4e-15	56.5	0.1	2e-15	56.0	0.1	1.3	1	0	0	1	1	1	1	Cupin	domain
Cupin_1	PF00190.17	gi|449067603|ref|YP_007434685.1|	-	6.1e-12	45.1	0.0	1.2e-11	44.1	0.0	1.4	1	0	0	1	1	1	1	Cupin
AraC_binding	PF02311.14	gi|449067603|ref|YP_007434685.1|	-	1.5e-07	31.1	0.0	2.9e-07	30.2	0.0	1.4	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
ARD	PF03079.9	gi|449067603|ref|YP_007434685.1|	-	6.7e-05	22.8	0.4	0.00051	20.0	0.0	2.1	2	0	0	2	2	2	1	ARD/ARD'	family
CENP-C_C	PF11699.3	gi|449067603|ref|YP_007434685.1|	-	8.9e-05	22.3	0.0	0.00015	21.7	0.0	1.3	1	0	0	1	1	1	1	Mif2/CENP-C	like
Asp_Arg_Hydrox	PF05118.10	gi|449067603|ref|YP_007434685.1|	-	0.00032	20.5	0.0	0.00083	19.2	0.0	1.7	1	1	0	1	1	1	1	Aspartyl/Asparaginyl	beta-hydroxylase
Cupin_6	PF12852.2	gi|449067603|ref|YP_007434685.1|	-	0.0065	16.1	0.0	0.0089	15.6	0.0	1.2	1	0	0	1	1	1	1	Cupin
EutQ	PF06249.7	gi|449067603|ref|YP_007434685.1|	-	0.01	15.3	0.0	0.016	14.7	0.0	1.3	1	0	0	1	1	1	0	Ethanolamine	utilisation	protein	EutQ
Auxin_BP	PF02041.11	gi|449067603|ref|YP_007434685.1|	-	0.015	14.7	0.1	0.033	13.6	0.0	1.6	1	1	0	1	1	1	0	Auxin	binding	protein
Prefoldin_2	PF01920.15	gi|449067603|ref|YP_007434685.1|	-	0.043	13.5	0.4	6.6	6.5	0.0	2.2	2	0	0	2	2	2	0	Prefoldin	subunit
Cupin_3	PF05899.7	gi|449067603|ref|YP_007434685.1|	-	0.088	12.1	0.0	0.13	11.6	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF861)
GPI	PF06560.6	gi|449067603|ref|YP_007434685.1|	-	0.11	11.4	0.3	0.33	9.9	0.2	1.8	1	1	0	1	1	1	0	Glucose-6-phosphate	isomerase	(GPI)
AraC_N	PF06719.8	gi|449067603|ref|YP_007434685.1|	-	0.11	11.7	0.0	0.23	10.7	0.0	1.5	1	0	0	1	1	1	0	AraC-type	transcriptional	regulator	N-terminus
DUF326	PF03860.11	gi|449067604|ref|YP_007434686.1|	-	0.82	9.5	7.2	6.8	6.6	0.1	3.0	2	1	0	2	2	2	0	Domain	of	Unknown	Function	(DUF326)
zf-C2HC5	PF06221.8	gi|449067604|ref|YP_007434686.1|	-	0.85	9.4	5.5	1.4	8.7	3.8	1.4	1	1	0	1	1	1	0	Putative	zinc	finger	motif,	C2HC5-type
Fusion_gly	PF00523.13	gi|449067604|ref|YP_007434686.1|	-	1.4	6.8	6.7	1.7	6.6	4.6	1.0	1	0	0	1	1	1	0	Fusion	glycoprotein	F0
zf-C4pol	PF14260.1	gi|449067604|ref|YP_007434686.1|	-	2	8.4	8.5	0.28	11.2	1.4	2.1	2	0	0	2	2	2	0	C4-type	zinc-finger	of	DNA	polymerase	delta
VIT1	PF01988.14	gi|449067605|ref|YP_007434687.1|	-	1.6e-18	66.9	15.3	5.3e-17	62.0	10.6	2.0	1	1	0	1	1	1	1	VIT	family
DUF2142	PF09913.4	gi|449067605|ref|YP_007434687.1|	-	0.00082	18.1	7.3	0.00091	17.9	5.1	1.0	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2142)
7TM-7TMR_HD	PF07698.6	gi|449067605|ref|YP_007434687.1|	-	0.043	13.2	17.4	0.019	14.4	4.4	2.2	2	0	0	2	2	2	0	7TM	receptor	with	intracellular	HD	hydrolase
DUF1212	PF06738.7	gi|449067605|ref|YP_007434687.1|	-	0.38	10.1	6.3	0.99	8.8	4.4	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1212)
DUF3815	PF12821.2	gi|449067605|ref|YP_007434687.1|	-	0.62	9.9	8.6	4.1	7.3	2.2	2.4	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3815)
DUF4491	PF14898.1	gi|449067605|ref|YP_007434687.1|	-	5.7	7.1	15.3	4	7.6	4.5	3.2	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4491)
CarboxypepD_reg	PF13620.1	gi|449067606|ref|YP_007434688.1|	-	0.013	15.5	1.4	0.032	14.2	0.2	2.0	1	1	1	2	2	2	0	Carboxypeptidase	regulatory-like	domain
GSHPx	PF00255.14	gi|449067606|ref|YP_007434688.1|	-	0.031	13.6	0.1	0.064	12.6	0.1	1.5	1	0	0	1	1	1	0	Glutathione	peroxidase
DUF4382	PF14321.1	gi|449067606|ref|YP_007434688.1|	-	0.063	13.3	0.2	0.073	13.1	0.2	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4382)
BiPBP_C	PF06832.7	gi|449067606|ref|YP_007434688.1|	-	0.1	12.5	0.0	0.2	11.5	0.0	1.5	1	0	0	1	1	1	0	Penicillin-Binding	Protein	C-terminus	Family
DUF4307	PF14155.1	gi|449067606|ref|YP_007434688.1|	-	0.25	11.1	0.9	0.36	10.6	0.2	1.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4307)
Cna_B	PF05738.8	gi|449067606|ref|YP_007434688.1|	-	0.45	10.2	7.5	1.5	8.6	5.2	1.9	1	1	0	1	1	1	0	Cna	protein	B-type	domain
Y_Y_Y	PF07495.8	gi|449067606|ref|YP_007434688.1|	-	2.1	8.1	5.1	4.3	7.1	0.1	2.6	2	1	0	2	2	2	0	Y_Y_Y	domain
Adenosine_kin	PF04008.9	gi|449067607|ref|YP_007434689.1|	-	2.5e-78	260.9	0.2	2.9e-78	260.7	0.1	1.0	1	0	0	1	1	1	1	Adenosine	specific	kinase
DUF309	PF03745.9	gi|449067608|ref|YP_007434690.1|	-	3.8e-14	51.8	0.0	4.9e-14	51.5	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF309)
Cactin_mid	PF10312.4	gi|449067608|ref|YP_007434690.1|	-	0.13	11.5	0.1	0.17	11.1	0.1	1.2	1	0	0	1	1	1	0	Conserved	mid	region	of	cactin
DUF2441	PF10386.4	gi|449067609|ref|YP_007434691.1|	-	0.11	12.4	1.2	0.12	12.4	0.8	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2441)
Radical_SAM	PF04055.16	gi|449067610|ref|YP_007434692.1|	-	8.6e-20	71.5	0.3	3.6e-19	69.5	0.0	2.0	2	0	0	2	2	2	1	Radical	SAM	superfamily
zf-ribbon_3	PF13248.1	gi|449067610|ref|YP_007434692.1|	-	0.00084	18.4	0.8	0.00084	18.4	0.6	2.7	2	1	0	2	2	2	1	zinc-ribbon	domain
Fer4_12	PF13353.1	gi|449067610|ref|YP_007434692.1|	-	0.00097	19.2	0.2	0.0027	17.8	0.0	1.8	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
DZR	PF12773.2	gi|449067610|ref|YP_007434692.1|	-	0.003	17.3	0.1	0.003	17.3	0.0	2.7	3	0	0	3	3	3	1	Double	zinc	ribbon
UPF0547	PF10571.4	gi|449067610|ref|YP_007434692.1|	-	0.0044	16.6	0.3	0.016	14.8	0.2	2.0	1	1	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
zinc_ribbon_2	PF13240.1	gi|449067610|ref|YP_007434692.1|	-	0.44	10.0	10.7	0.52	9.8	0.2	3.2	3	0	0	3	3	3	0	zinc-ribbon	domain
zf-ISL3	PF14690.1	gi|449067610|ref|YP_007434692.1|	-	0.61	10.1	0.1	0.61	10.1	0.1	2.9	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
DNA_RNApol_7kD	PF03604.8	gi|449067610|ref|YP_007434692.1|	-	1.1	8.7	0.0	1.1	8.7	0.0	3.7	4	0	0	4	4	4	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-C2H2	PF00096.21	gi|449067610|ref|YP_007434692.1|	-	2.1	8.8	6.0	13	6.3	0.1	3.2	3	0	0	3	3	3	0	Zinc	finger,	C2H2	type
TF_Zn_Ribbon	PF08271.7	gi|449067610|ref|YP_007434692.1|	-	4.3	6.7	8.2	2.8	7.3	1.2	3.1	3	1	0	3	3	3	0	TFIIB	zinc-binding
ECH	PF00378.15	gi|449067611|ref|YP_007434693.1|	-	1.9e-74	249.9	0.0	2.3e-74	249.6	0.0	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
SDH_sah	PF01972.11	gi|449067611|ref|YP_007434693.1|	-	0.025	13.3	0.0	0.17	10.6	0.0	1.9	1	1	1	2	2	2	0	Serine	dehydrogenase	proteinase
Herpes_UL33	PF03581.8	gi|449067612|ref|YP_007434694.1|	-	0.043	13.7	0.0	0.073	12.9	0.0	1.3	1	0	0	1	1	1	0	Herpesvirus	UL33-like	protein
UbiA	PF01040.13	gi|449067613|ref|YP_007434695.1|	-	5.7e-27	94.5	24.1	7.3e-27	94.2	16.7	1.1	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
DUF751	PF05421.6	gi|449067613|ref|YP_007434695.1|	-	7.4	6.9	15.7	1.6	9.0	0.5	4.2	3	1	1	4	4	4	0	Protein	of	unknown	function	(DUF751)
Homoserine_dh	PF00742.14	gi|449067614|ref|YP_007434696.1|	-	4.1e-51	173.1	0.0	5.2e-51	172.8	0.0	1.1	1	0	0	1	1	1	1	Homoserine	dehydrogenase
B3_4	PF03483.12	gi|449067615|ref|YP_007434697.1|	-	2.3e-29	102.0	0.0	3.5e-29	101.4	0.0	1.3	1	0	0	1	1	1	1	B3/4	domain
PmbA_TldD	PF01523.11	gi|449067616|ref|YP_007434698.1|	-	1.9e-54	184.9	0.5	2.4e-54	184.6	0.3	1.1	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
Tup_N	PF08581.5	gi|449067616|ref|YP_007434698.1|	-	0.7	10.1	4.2	0.35	11.0	1.1	1.8	2	0	0	2	2	2	0	Tup	N-terminal
PmbA_TldD	PF01523.11	gi|449067617|ref|YP_007434699.1|	-	3.7e-48	164.3	0.2	5e-48	163.8	0.1	1.1	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
Usp	PF00582.21	gi|449067618|ref|YP_007434700.1|	-	1.6e-36	125.5	0.2	1.8e-36	125.4	0.1	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
BPL_LplA_LipB	PF03099.14	gi|449067619|ref|YP_007434701.1|	-	1.5e-18	66.9	0.5	3.8e-18	65.7	0.0	1.7	2	0	0	2	2	2	1	Biotin/lipoate	A/B	protein	ligase	family
Sua5_yciO_yrdC	PF01300.13	gi|449067620|ref|YP_007434702.1|	-	1.8e-57	193.4	0.0	2.8e-57	192.8	0.0	1.3	1	0	0	1	1	1	1	Telomere	recombination
SUA5	PF03481.8	gi|449067620|ref|YP_007434702.1|	-	1e-23	83.7	0.0	1.5e-23	83.2	0.0	1.3	1	0	0	1	1	1	1	Putative	GTP-binding	controlling	metal-binding
Oxidored_q6	PF01058.17	gi|449067621|ref|YP_007434703.1|	-	3.9e-21	75.0	0.0	5.1e-21	74.6	0.0	1.2	1	0	0	1	1	1	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
Peptidase_M20	PF01546.23	gi|449067622|ref|YP_007434704.1|	-	1.4e-40	138.8	0.0	1.7e-40	138.5	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|449067622|ref|YP_007434704.1|	-	7.5e-19	67.5	0.0	1.4e-18	66.6	0.0	1.4	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Peptidase_M28	PF04389.12	gi|449067622|ref|YP_007434704.1|	-	2.4e-06	27.3	0.0	0.00046	19.9	0.0	2.2	2	0	0	2	2	2	2	Peptidase	family	M28
Peptidase_M42	PF05343.9	gi|449067622|ref|YP_007434704.1|	-	0.0006	18.6	0.0	0.058	12.1	0.0	2.8	2	1	1	3	3	3	1	M42	glutamyl	aminopeptidase
VIT1	PF01988.14	gi|449067623|ref|YP_007434705.1|	-	1e-45	155.8	7.8	1e-45	155.8	5.4	1.8	2	0	0	2	2	2	1	VIT	family
Rubrerythrin	PF02915.12	gi|449067623|ref|YP_007434705.1|	-	1.4e-10	41.6	6.9	2.5e-10	40.8	4.8	1.3	1	0	0	1	1	1	1	Rubrerythrin
Rhomboid	PF01694.17	gi|449067623|ref|YP_007434705.1|	-	0.12	12.4	7.5	0.16	11.9	0.1	2.2	2	0	0	2	2	2	0	Rhomboid	family
MFS_1	PF07690.11	gi|449067624|ref|YP_007434706.1|	-	2.1e-56	191.1	46.4	2.1e-56	191.1	32.2	2.1	2	0	0	2	2	2	1	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|449067624|ref|YP_007434706.1|	-	1.2e-07	30.2	13.7	1.7e-07	29.7	6.6	2.3	2	0	0	2	2	2	2	Transmembrane	secretion	effector
DUF872	PF05915.7	gi|449067624|ref|YP_007434706.1|	-	0.14	12.0	1.6	0.72	9.7	1.1	2.3	1	0	0	1	1	1	0	Eukaryotic	protein	of	unknown	function	(DUF872)
PK	PF00224.16	gi|449067625|ref|YP_007434707.1|	-	2.7e-82	276.2	1.7	4.1e-82	275.5	1.2	1.3	1	0	0	1	1	1	1	Pyruvate	kinase,	barrel	domain
PK_C	PF02887.11	gi|449067625|ref|YP_007434707.1|	-	4.3e-21	74.6	0.0	8.8e-21	73.6	0.0	1.6	1	0	0	1	1	1	1	Pyruvate	kinase,	alpha/beta	domain
HpcH_HpaI	PF03328.9	gi|449067625|ref|YP_007434707.1|	-	0.0062	15.4	0.0	0.013	14.4	0.0	1.5	1	0	0	1	1	1	1	HpcH/HpaI	aldolase/citrate	lyase	family
DUF2299	PF10061.4	gi|449067626|ref|YP_007434708.1|	-	1.3e-54	183.4	0.0	1.4e-54	183.2	0.0	1.0	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2299)
Methyltransf_11	PF08241.7	gi|449067628|ref|YP_007434710.1|	-	5e-17	62.1	0.0	8.6e-17	61.4	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|449067628|ref|YP_007434710.1|	-	1.6e-11	44.0	0.1	2.4e-11	43.4	0.1	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|449067628|ref|YP_007434710.1|	-	1.9e-08	34.1	0.0	4.3e-08	33.0	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_8	PF05148.10	gi|449067628|ref|YP_007434710.1|	-	1.9e-07	30.9	0.0	3e-07	30.3	0.0	1.3	1	0	0	1	1	1	1	Hypothetical	methyltransferase
Methyltransf_12	PF08242.7	gi|449067628|ref|YP_007434710.1|	-	3.3e-07	30.6	0.0	6e-07	29.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|449067628|ref|YP_007434710.1|	-	1.1e-05	25.6	0.0	1.8e-05	25.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|449067628|ref|YP_007434710.1|	-	9.2e-05	21.6	0.0	0.0005	19.2	0.0	1.9	2	0	0	2	2	2	1	ubiE/COQ5	methyltransferase	family
Methyltransf_9	PF08003.6	gi|449067628|ref|YP_007434710.1|	-	0.0018	17.0	0.0	0.0028	16.4	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1698)
Methyltransf_18	PF12847.2	gi|449067628|ref|YP_007434710.1|	-	0.0046	17.5	0.3	0.033	14.7	0.2	2.0	1	1	0	1	1	1	1	Methyltransferase	domain
MetW	PF07021.7	gi|449067628|ref|YP_007434710.1|	-	0.0069	15.7	0.0	0.0093	15.3	0.0	1.1	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
CMAS	PF02353.15	gi|449067628|ref|YP_007434710.1|	-	0.017	14.1	0.0	0.042	12.9	0.0	1.6	1	1	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
ThiS	PF02597.15	gi|449067629|ref|YP_007434711.1|	-	1.1e-06	28.9	0.2	1.2e-06	28.7	0.2	1.1	1	0	0	1	1	1	1	ThiS	family
ThiS-like	PF14453.1	gi|449067629|ref|YP_007434711.1|	-	0.0027	17.5	0.1	0.0032	17.2	0.0	1.2	1	0	0	1	1	1	1	ThiS-like	ubiquitin
CRISPR_Cas2	PF09827.4	gi|449067629|ref|YP_007434711.1|	-	0.0066	16.5	0.1	0.007	16.4	0.0	1.3	1	1	0	1	1	1	1	CRISPR	associated	protein	Cas2
TOBE_3	PF12857.2	gi|449067629|ref|YP_007434711.1|	-	0.0097	15.7	0.6	0.016	15.0	0.2	1.5	2	0	0	2	2	2	1	TOBE-like	domain
DAO	PF01266.19	gi|449067631|ref|YP_007434713.1|	-	1.3e-34	119.7	0.0	2.2e-34	118.9	0.0	1.4	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|449067631|ref|YP_007434713.1|	-	3.5e-07	30.1	0.1	8.9e-07	28.8	0.1	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_2	PF07992.9	gi|449067631|ref|YP_007434713.1|	-	3.1e-05	23.9	0.2	0.0002	21.3	0.1	2.0	1	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|449067631|ref|YP_007434713.1|	-	3.1e-05	23.2	0.0	3.8e-05	22.8	0.0	1.1	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox	PF00070.22	gi|449067631|ref|YP_007434713.1|	-	0.0001	22.6	3.4	0.002	18.4	0.2	3.5	4	0	0	4	4	4	1	Pyridine	nucleotide-disulphide	oxidoreductase
ApbA	PF02558.11	gi|449067631|ref|YP_007434713.1|	-	0.00011	21.6	0.2	0.00021	20.7	0.2	1.4	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
3HCDH_N	PF02737.13	gi|449067631|ref|YP_007434713.1|	-	0.0012	18.4	0.1	0.0019	17.8	0.1	1.3	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
PMBR	PF09373.5	gi|449067631|ref|YP_007434713.1|	-	0.0017	18.1	1.7	0.0053	16.6	0.0	2.6	2	0	0	2	2	2	1	Pseudomurein-binding	repeat
NAD_Gly3P_dh_N	PF01210.18	gi|449067631|ref|YP_007434713.1|	-	0.0024	17.6	0.0	0.004	16.9	0.0	1.4	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
UDPG_MGDP_dh_N	PF03721.9	gi|449067631|ref|YP_007434713.1|	-	0.0091	15.3	0.4	0.025	13.9	0.3	1.7	2	0	0	2	2	2	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Thi4	PF01946.12	gi|449067631|ref|YP_007434713.1|	-	0.013	14.6	0.3	0.022	13.8	0.2	1.4	1	0	0	1	1	1	0	Thi4	family
NAD_binding_9	PF13454.1	gi|449067631|ref|YP_007434713.1|	-	0.022	14.5	0.7	0.054	13.2	0.3	1.7	2	0	0	2	2	2	0	FAD-NAD(P)-binding
Trp_halogenase	PF04820.9	gi|449067631|ref|YP_007434713.1|	-	0.029	12.9	0.4	0.042	12.4	0.3	1.2	1	0	0	1	1	1	0	Tryptophan	halogenase
Shikimate_DH	PF01488.15	gi|449067631|ref|YP_007434713.1|	-	0.06	13.4	0.0	1.8	8.6	0.1	2.3	2	0	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
ThiF	PF00899.16	gi|449067631|ref|YP_007434713.1|	-	0.071	12.9	0.1	0.17	11.6	0.1	1.6	1	0	0	1	1	1	0	ThiF	family
FAD_binding_2	PF00890.19	gi|449067631|ref|YP_007434713.1|	-	0.083	11.7	0.1	0.13	11.0	0.0	1.3	1	0	0	1	1	1	0	FAD	binding	domain
NAD_binding_2	PF03446.10	gi|449067631|ref|YP_007434713.1|	-	0.095	12.5	0.0	0.15	11.8	0.0	1.3	1	0	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Skp1	PF01466.14	gi|449067631|ref|YP_007434713.1|	-	0.11	12.5	0.0	0.29	11.2	0.0	1.6	1	0	0	1	1	1	0	Skp1	family,	dimerisation	domain
NAD_binding_10	PF13460.1	gi|449067631|ref|YP_007434713.1|	-	0.13	12.2	0.0	1.2	9.1	0.0	2.0	2	0	0	2	2	2	0	NADH(P)-binding
HI0933_like	PF03486.9	gi|449067631|ref|YP_007434713.1|	-	0.14	10.5	0.4	0.22	9.9	0.3	1.3	1	0	0	1	1	1	0	HI0933-like	protein
GIDA	PF01134.17	gi|449067631|ref|YP_007434713.1|	-	0.16	10.8	0.1	0.29	9.9	0.0	1.4	1	0	0	1	1	1	0	Glucose	inhibited	division	protein	A
DUF1955	PF09205.5	gi|449067632|ref|YP_007434714.1|	-	8.2e-78	259.4	7.6	9.4e-78	259.3	5.3	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1955)
DUF3366	PF11846.3	gi|449067632|ref|YP_007434714.1|	-	0.0098	15.7	0.0	0.013	15.3	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3366)
HEAT_2	PF13646.1	gi|449067632|ref|YP_007434714.1|	-	0.098	12.9	0.0	0.21	11.8	0.0	1.5	2	0	0	2	2	2	0	HEAT	repeats
DUF790	PF05626.6	gi|449067633|ref|YP_007434715.1|	-	4.8e-116	387.4	11.6	6.5e-116	386.9	8.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF790)
HHH_4	PF14490.1	gi|449067633|ref|YP_007434715.1|	-	0.27	11.0	2.3	0.3	10.8	0.1	2.3	3	0	0	3	3	3	0	Helix-hairpin-helix	containing	domain
ResIII	PF04851.10	gi|449067634|ref|YP_007434716.1|	-	9.3e-25	87.5	0.0	1.2e-23	83.8	0.0	2.5	2	1	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.26	gi|449067634|ref|YP_007434716.1|	-	5.6e-17	61.3	0.1	1.5e-16	60.0	0.0	1.7	1	1	0	1	1	1	1	Helicase	conserved	C-terminal	domain
SNF2_N	PF00176.18	gi|449067634|ref|YP_007434716.1|	-	1.6e-12	46.8	0.2	2.1e-10	39.9	0.0	2.5	1	1	1	2	2	2	2	SNF2	family	N-terminal	domain
DEAD	PF00270.24	gi|449067634|ref|YP_007434716.1|	-	2.8e-11	43.1	0.0	9.9e-11	41.4	0.0	1.9	2	1	0	2	2	2	1	DEAD/DEAH	box	helicase
AAA_22	PF13401.1	gi|449067634|ref|YP_007434716.1|	-	0.00098	19.2	0.1	0.08	13.0	0.0	2.6	3	0	0	3	3	3	1	AAA	domain
AAA_10	PF12846.2	gi|449067634|ref|YP_007434716.1|	-	0.004	16.6	0.3	1.6	8.0	0.0	2.5	2	1	1	3	3	3	2	AAA-like	domain
FTA4	PF13093.1	gi|449067634|ref|YP_007434716.1|	-	0.085	12.2	1.2	0.3	10.4	0.8	1.8	1	1	0	1	1	1	0	Kinetochore	complex	Fta4	of	Sim4	subunit,	or	CENP-50
HTH_24	PF13412.1	gi|449067635|ref|YP_007434717.1|	-	2.4e-27	94.0	6.7	1.2e-17	62.9	0.4	2.3	2	0	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|449067635|ref|YP_007434717.1|	-	2e-18	65.6	0.0	1.2e-10	40.7	0.0	2.3	2	0	0	2	2	2	2	AsnC-type	helix-turn-helix	domain
TrmB	PF01978.14	gi|449067635|ref|YP_007434717.1|	-	1.3e-08	34.3	1.1	0.0055	16.3	0.0	2.8	3	0	0	3	3	3	2	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|449067635|ref|YP_007434717.1|	-	2.5e-07	30.2	0.0	0.0062	16.1	0.0	2.3	2	0	0	2	2	2	2	MarR	family
MarR	PF01047.17	gi|449067635|ref|YP_007434717.1|	-	2.2e-06	27.2	0.2	0.012	15.3	0.0	2.4	2	0	0	2	2	2	2	MarR	family
HTH_Mga	PF08280.6	gi|449067635|ref|YP_007434717.1|	-	4.6e-06	26.2	0.3	0.0047	16.6	0.0	2.7	2	0	0	2	2	2	2	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_20	PF12840.2	gi|449067635|ref|YP_007434717.1|	-	0.00013	21.6	0.0	0.23	11.2	0.0	2.4	2	0	0	2	2	2	2	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|449067635|ref|YP_007434717.1|	-	0.00038	20.5	0.2	0.32	11.1	0.0	2.3	2	0	0	2	2	2	2	Transcriptional	regulator
HTH_9	PF08221.6	gi|449067635|ref|YP_007434717.1|	-	0.00044	20.0	0.3	1.1	9.1	0.1	2.3	2	0	0	2	2	2	2	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
HTH_5	PF01022.15	gi|449067635|ref|YP_007434717.1|	-	0.00075	19.1	0.0	0.8	9.4	0.0	2.3	2	0	0	2	2	2	2	Bacterial	regulatory	protein,	arsR	family
HTH_34	PF13601.1	gi|449067635|ref|YP_007434717.1|	-	0.0011	18.9	0.1	0.042	13.8	0.0	2.4	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_11	PF08279.7	gi|449067635|ref|YP_007434717.1|	-	0.0013	18.3	1.0	0.36	10.4	0.1	2.4	2	0	0	2	2	2	1	HTH	domain
TFIIE_alpha	PF02002.12	gi|449067635|ref|YP_007434717.1|	-	0.0035	16.8	1.3	0.23	10.9	0.1	2.4	2	0	0	2	2	2	1	TFIIE	alpha	subunit
Mga	PF05043.8	gi|449067635|ref|YP_007434717.1|	-	0.0044	17.2	0.1	1.8	8.8	0.1	2.4	2	0	0	2	2	2	1	Mga	helix-turn-helix	domain
B-block_TFIIIC	PF04182.7	gi|449067635|ref|YP_007434717.1|	-	0.0054	16.5	0.4	0.16	11.8	0.0	2.4	2	0	0	2	2	2	1	B-block	binding	subunit	of	TFIIIC
HTH_23	PF13384.1	gi|449067635|ref|YP_007434717.1|	-	0.013	15.1	0.1	0.59	9.8	0.0	2.3	2	0	0	2	2	2	0	Homeodomain-like	domain
LexA_DNA_bind	PF01726.11	gi|449067635|ref|YP_007434717.1|	-	0.013	15.0	0.1	0.69	9.5	0.0	2.4	2	0	0	2	2	2	0	LexA	DNA	binding	domain
HTH_45	PF14947.1	gi|449067635|ref|YP_007434717.1|	-	0.023	14.4	1.2	2.1	8.2	0.1	2.5	2	0	0	2	2	2	0	Winged	helix-turn-helix
HTH_27	PF13463.1	gi|449067635|ref|YP_007434717.1|	-	0.044	14.1	0.0	5.8	7.3	0.0	2.4	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
HTH_36	PF13730.1	gi|449067635|ref|YP_007434717.1|	-	0.082	13.0	0.3	5.8	7.1	0.0	2.7	2	0	0	2	2	2	0	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|449067635|ref|YP_007434717.1|	-	0.091	12.2	0.0	2.1	7.9	0.0	2.3	2	0	0	2	2	2	0	Sigma-70,	region	4
NPCC	PF08058.6	gi|449067636|ref|YP_007434718.1|	-	0.16	11.8	1.7	0.29	10.9	1.2	1.5	1	0	0	1	1	1	0	Nuclear	pore	complex	component
MscL	PF01741.13	gi|449067636|ref|YP_007434718.1|	-	0.52	10.4	4.4	0.77	9.9	2.8	1.7	1	1	0	1	1	1	0	Large-conductance	mechanosensitive	channel,	MscL
ECF-ribofla_trS	PF07155.7	gi|449067637|ref|YP_007434719.1|	-	0.032	13.9	0.8	0.032	13.9	0.6	1.9	1	1	1	2	2	2	0	ECF-type	riboflavin	transporter,	S	component
Peptidase_M32	PF02074.10	gi|449067638|ref|YP_007434720.1|	-	3e-157	524.2	4.9	3.4e-157	524.0	3.4	1.0	1	0	0	1	1	1	1	Carboxypeptidase	Taq	(M32)	metallopeptidase
MMPL	PF03176.10	gi|449067639|ref|YP_007434721.1|	-	4.3e-68	229.4	17.9	9.9e-35	119.8	4.6	2.4	2	0	0	2	2	2	2	MMPL	family
FlxA	PF14282.1	gi|449067639|ref|YP_007434721.1|	-	0.0095	15.8	1.5	0.022	14.7	1.1	1.5	1	0	0	1	1	1	1	FlxA-like	protein
Methyltransf_11	PF08241.7	gi|449067640|ref|YP_007434722.1|	-	3.1e-11	43.6	0.0	6.1e-11	42.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_8	PF05148.10	gi|449067640|ref|YP_007434722.1|	-	0.00013	21.7	0.0	0.00014	21.5	0.0	1.1	1	0	0	1	1	1	1	Hypothetical	methyltransferase
Methyltransf_23	PF13489.1	gi|449067640|ref|YP_007434722.1|	-	0.0032	17.1	0.0	0.0043	16.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|449067640|ref|YP_007434722.1|	-	0.021	13.9	0.0	0.036	13.1	0.0	1.5	1	0	0	1	1	1	0	ubiE/COQ5	methyltransferase	family
Methyltransf_25	PF13649.1	gi|449067640|ref|YP_007434722.1|	-	0.022	15.0	0.0	0.046	14.0	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
FtsJ	PF01728.14	gi|449067640|ref|YP_007434722.1|	-	0.078	12.9	0.0	0.1	12.5	0.0	1.3	1	0	0	1	1	1	0	FtsJ-like	methyltransferase
Methyltransf_12	PF08242.7	gi|449067640|ref|YP_007434722.1|	-	0.1	13.0	0.3	0.25	11.8	0.1	1.8	2	1	0	2	2	2	0	Methyltransferase	domain
ABC1	PF03109.11	gi|449067641|ref|YP_007434723.1|	-	6e-23	81.0	0.0	1.2e-22	80.1	0.0	1.5	1	0	0	1	1	1	1	ABC1	family
RIO1	PF01163.17	gi|449067641|ref|YP_007434723.1|	-	3.7e-06	26.4	0.3	1.4e-05	24.5	0.0	2.0	2	0	0	2	2	2	1	RIO1	family
Pkinase	PF00069.20	gi|449067641|ref|YP_007434723.1|	-	0.00018	20.7	0.3	0.0023	17.1	0.2	2.1	1	1	0	1	1	1	1	Protein	kinase	domain
APH	PF01636.18	gi|449067641|ref|YP_007434723.1|	-	0.036	13.7	0.1	0.26	11.0	0.0	2.0	1	1	1	2	2	2	0	Phosphotransferase	enzyme	family
HSP20	PF00011.16	gi|449067642|ref|YP_007434724.1|	-	4.6e-09	36.0	0.0	5.7e-09	35.7	0.0	1.1	1	0	0	1	1	1	1	Hsp20/alpha	crystallin	family
CCG	PF02754.11	gi|449067643|ref|YP_007434725.1|	-	6.9e-11	42.0	0.0	2e-08	34.1	0.0	2.6	2	0	0	2	2	2	2	Cysteine-rich	domain
DUF162	PF02589.10	gi|449067644|ref|YP_007434726.1|	-	7e-53	178.9	0.6	9.4e-53	178.5	0.4	1.2	1	0	0	1	1	1	1	Uncharacterised	ACR,	YkgG	family	COG1556
Fer4_8	PF13183.1	gi|449067644|ref|YP_007434726.1|	-	3.2e-10	39.8	4.5	5.3e-10	39.1	3.1	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|449067644|ref|YP_007434726.1|	-	5.3e-08	33.1	1.9	0.0039	17.5	0.1	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|449067644|ref|YP_007434726.1|	-	4.4e-06	26.9	5.4	8.3e-06	26.0	3.7	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|449067644|ref|YP_007434726.1|	-	1.4e-05	24.8	5.7	0.00017	21.3	4.6	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|449067644|ref|YP_007434726.1|	-	1.6e-05	25.1	5.9	4.7e-05	23.6	4.2	1.7	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|449067644|ref|YP_007434726.1|	-	0.00036	19.9	8.6	0.0016	17.9	1.3	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|449067644|ref|YP_007434726.1|	-	0.00055	20.1	7.6	0.016	15.4	6.2	2.2	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_20	PF14691.1	gi|449067644|ref|YP_007434726.1|	-	0.0011	18.5	1.6	0.086	12.4	0.0	2.5	2	0	0	2	2	2	1	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_6	PF12837.2	gi|449067644|ref|YP_007434726.1|	-	0.0043	16.8	10.1	0.013	15.3	1.9	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|449067644|ref|YP_007434726.1|	-	0.0062	16.3	5.5	0.024	14.4	3.8	1.9	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|449067644|ref|YP_007434726.1|	-	0.0075	16.1	6.1	0.06	13.2	0.8	2.4	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|449067644|ref|YP_007434726.1|	-	0.01	16.5	7.3	0.04	14.6	5.1	2.0	1	1	0	1	1	1	0	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.2	gi|449067644|ref|YP_007434726.1|	-	0.061	13.6	8.3	0.093	13.1	1.0	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|449067644|ref|YP_007434726.1|	-	1.8	9.3	12.3	8.9	7.1	0.5	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Plasmodium_Vir	PF05795.6	gi|449067645|ref|YP_007434727.1|	-	0.012	14.8	1.8	0.031	13.4	1.2	1.7	1	0	0	1	1	1	0	Plasmodium	vivax	Vir	protein
Pex14_N	PF04695.8	gi|449067645|ref|YP_007434727.1|	-	0.026	14.5	6.6	0.075	13.0	4.6	1.7	1	0	0	1	1	1	0	Peroxisomal	membrane	anchor	protein	(Pex14p)	conserved	region
Rifin_STEVOR	PF02009.11	gi|449067645|ref|YP_007434727.1|	-	5.4	6.5	8.3	0.27	10.8	1.0	2.4	2	2	0	2	2	2	0	Rifin/stevor	family
MFS_1	PF07690.11	gi|449067646|ref|YP_007434728.1|	-	2.9e-41	141.3	83.5	1.9e-36	125.5	34.8	3.2	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|449067646|ref|YP_007434728.1|	-	1.4e-11	43.6	36.8	1.1e-06	27.5	11.9	3.9	3	1	0	3	3	3	3	Sugar	(and	other)	transporter
MFS_3	PF05977.8	gi|449067646|ref|YP_007434728.1|	-	8.7e-06	24.1	8.1	2.9e-05	22.4	2.1	2.2	2	0	0	2	2	2	2	Transmembrane	secretion	effector
MarR	PF01047.17	gi|449067647|ref|YP_007434729.1|	-	2.2e-14	52.9	0.4	5e-14	51.7	0.0	1.8	2	0	0	2	2	2	1	MarR	family
HTH_27	PF13463.1	gi|449067647|ref|YP_007434729.1|	-	6e-14	52.1	0.1	1.1e-13	51.3	0.1	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|449067647|ref|YP_007434729.1|	-	1.3e-10	40.7	0.0	2e-10	40.1	0.0	1.3	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|449067647|ref|YP_007434729.1|	-	8e-09	35.0	1.2	1.3e-08	34.4	0.8	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_5	PF01022.15	gi|449067647|ref|YP_007434729.1|	-	1.4e-07	31.0	0.1	3.8e-07	29.6	0.0	1.7	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_34	PF13601.1	gi|449067647|ref|YP_007434729.1|	-	3e-07	30.3	0.3	4.9e-07	29.6	0.2	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
Fe_dep_repress	PF01325.14	gi|449067647|ref|YP_007434729.1|	-	3e-05	23.8	1.0	5.9e-05	22.9	0.7	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_45	PF14947.1	gi|449067647|ref|YP_007434729.1|	-	3.9e-05	23.3	1.9	9.1e-05	22.1	1.3	1.7	1	0	0	1	1	1	1	Winged	helix-turn-helix
DUF4423	PF14394.1	gi|449067647|ref|YP_007434729.1|	-	0.0002	20.9	0.5	0.00023	20.7	0.4	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
HTH_24	PF13412.1	gi|449067647|ref|YP_007434729.1|	-	0.00065	19.0	0.0	0.0022	17.3	0.0	2.0	1	1	1	2	2	2	1	Winged	helix-turn-helix	DNA-binding
DUF3877	PF12993.2	gi|449067647|ref|YP_007434729.1|	-	0.0027	17.2	1.2	0.0032	17.0	0.8	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function,	E.	rectale	Gene	description	(DUF3877)
DUF3116	PF11313.3	gi|449067647|ref|YP_007434729.1|	-	0.0028	17.2	1.7	0.0085	15.6	0.2	2.2	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF3116)
DUF2250	PF10007.4	gi|449067647|ref|YP_007434729.1|	-	0.0048	16.7	1.3	0.0088	15.9	0.7	1.7	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
PadR	PF03551.9	gi|449067647|ref|YP_007434729.1|	-	0.0064	16.2	0.0	0.012	15.3	0.0	1.6	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HxlR	PF01638.12	gi|449067647|ref|YP_007434729.1|	-	0.0069	15.9	0.5	0.012	15.2	0.4	1.4	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_36	PF13730.1	gi|449067647|ref|YP_007434729.1|	-	0.0077	16.3	0.0	0.014	15.4	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|449067647|ref|YP_007434729.1|	-	0.0089	16.1	0.1	0.02	14.9	0.0	1.6	1	0	0	1	1	1	1	Transcriptional	regulator
Ead_Ea22	PF13935.1	gi|449067647|ref|YP_007434729.1|	-	0.014	15.7	0.4	0.14	12.4	0.0	2.1	1	1	1	2	2	2	0	Ead/Ea22-like	protein
HTH_IclR	PF09339.5	gi|449067647|ref|YP_007434729.1|	-	0.015	14.9	0.0	0.038	13.5	0.0	1.8	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_20	PF12840.2	gi|449067647|ref|YP_007434729.1|	-	0.02	14.6	0.0	0.045	13.5	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
Peptidase_A25	PF03418.9	gi|449067647|ref|YP_007434729.1|	-	0.026	13.2	0.3	0.03	13.0	0.2	1.1	1	0	0	1	1	1	0	Germination	protease
RasGAP_C	PF03836.10	gi|449067647|ref|YP_007434729.1|	-	0.048	13.3	0.7	0.048	13.3	0.5	2.0	2	1	1	3	3	3	0	RasGAP	C-terminus
HTH_Crp_2	PF13545.1	gi|449067647|ref|YP_007434729.1|	-	0.049	13.4	0.0	0.096	12.4	0.0	1.6	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
B-block_TFIIIC	PF04182.7	gi|449067647|ref|YP_007434729.1|	-	0.068	13.0	0.2	0.11	12.4	0.2	1.5	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
DUF3452	PF11934.3	gi|449067647|ref|YP_007434729.1|	-	0.069	12.4	0.7	0.081	12.2	0.5	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3452)
HTH_29	PF13551.1	gi|449067647|ref|YP_007434729.1|	-	0.072	13.2	0.0	0.13	12.4	0.0	1.5	1	0	0	1	1	1	0	Winged	helix-turn	helix
DUF2513	PF10711.4	gi|449067647|ref|YP_007434729.1|	-	0.085	12.9	0.2	0.2	11.7	0.1	1.7	1	1	1	2	2	2	0	Hypothetical	protein	(DUF2513)
FeoC	PF09012.5	gi|449067647|ref|YP_007434729.1|	-	0.095	12.4	0.1	0.23	11.1	0.0	1.6	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
dUTPase	PF00692.14	gi|449067649|ref|YP_007434731.1|	-	3.3e-08	33.0	0.0	5.3e-08	32.3	0.0	1.3	1	0	0	1	1	1	1	dUTPase
SGL	PF08450.7	gi|449067651|ref|YP_007434733.1|	-	1.4e-76	257.1	0.0	1.6e-76	256.9	0.0	1.0	1	0	0	1	1	1	1	SMP-30/Gluconolaconase/LRE-like	region
Reg_prop	PF07494.6	gi|449067651|ref|YP_007434733.1|	-	0.00028	20.5	0.2	1.2	9.3	0.0	4.0	3	0	0	3	3	3	2	Two	component	regulator	propeller
Str_synth	PF03088.11	gi|449067651|ref|YP_007434733.1|	-	0.0048	16.9	0.0	0.014	15.4	0.0	1.8	1	0	0	1	1	1	1	Strictosidine	synthase
Arylesterase	PF01731.15	gi|449067651|ref|YP_007434733.1|	-	0.12	12.3	0.0	0.3	11.0	0.0	1.7	1	0	0	1	1	1	0	Arylesterase
Peptidase_M48	PF01435.13	gi|449067652|ref|YP_007434734.1|	-	6.2e-21	74.9	0.0	1.4e-20	73.8	0.0	1.5	1	1	0	1	1	1	1	Peptidase	family	M48
Peptidase_M56	PF05569.6	gi|449067652|ref|YP_007434734.1|	-	8.4e-08	31.5	4.3	8.4e-08	31.5	3.0	1.4	1	1	0	1	1	1	1	BlaR1	peptidase	M56
Pex24p	PF06398.6	gi|449067652|ref|YP_007434734.1|	-	1.6	7.4	8.1	2.3	6.9	4.9	1.7	2	1	0	2	2	2	0	Integral	peroxisomal	membrane	peroxin
tRNA_m1G_MT	PF01746.16	gi|449067654|ref|YP_007434736.1|	-	9.4e-14	51.4	0.1	2.5e-12	46.7	0.1	2.1	1	1	0	1	1	1	1	tRNA	(Guanine-1)-methyltransferase
Peptidase_S9	PF00326.16	gi|449067656|ref|YP_007434738.1|	-	1.3e-49	168.2	0.1	1.9e-49	167.7	0.1	1.2	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
Abhydrolase_5	PF12695.2	gi|449067656|ref|YP_007434738.1|	-	3.1e-10	39.9	0.0	5.4e-10	39.1	0.0	1.4	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_6	PF12697.2	gi|449067656|ref|YP_007434738.1|	-	5.7e-09	36.1	0.0	7.8e-08	32.4	0.0	2.1	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Peptidase_S15	PF02129.13	gi|449067656|ref|YP_007434738.1|	-	2.1e-08	33.9	0.2	2e-05	24.1	0.3	2.7	1	1	1	2	2	2	2	X-Pro	dipeptidyl-peptidase	(S15	family)
DPPIV_N	PF00930.16	gi|449067656|ref|YP_007434738.1|	-	3.8e-05	22.4	0.0	0.0029	16.2	0.0	2.4	2	0	0	2	2	2	1	Dipeptidyl	peptidase	IV	(DPP	IV)	N-terminal	region
DLH	PF01738.13	gi|449067656|ref|YP_007434738.1|	-	4.8e-05	22.7	0.0	0.00016	20.9	0.0	1.8	1	1	0	1	1	1	1	Dienelactone	hydrolase	family
FSH1	PF03959.8	gi|449067656|ref|YP_007434738.1|	-	0.016	14.6	0.0	0.031	13.7	0.0	1.4	1	0	0	1	1	1	0	Serine	hydrolase	(FSH1)
Abhydrolase_2	PF02230.11	gi|449067656|ref|YP_007434738.1|	-	0.051	13.0	0.1	0.14	11.5	0.0	1.7	2	0	0	2	2	2	0	Phospholipase/Carboxylesterase
DUF3139	PF11337.3	gi|449067657|ref|YP_007434739.1|	-	0.32	11.3	1.7	0.88	9.8	0.9	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3139)
SH	PF01445.12	gi|449067661|ref|YP_007434743.1|	-	0.7	9.5	6.6	1.3	8.7	4.6	1.6	1	1	0	1	1	1	0	Viral	small	hydrophobic	protein
DUF4399	PF14347.1	gi|449067662|ref|YP_007434744.1|	-	0.079	12.9	0.3	3.7	7.6	0.0	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4399)
PepSY	PF03413.14	gi|449067663|ref|YP_007434745.1|	-	0.12	12.9	1.7	0.98	10.1	0.0	2.7	2	0	0	2	2	2	0	Peptidase	propeptide	and	YPEB	domain
DUF998	PF06197.8	gi|449067665|ref|YP_007434747.1|	-	1e-30	106.4	17.6	1.1e-30	106.2	12.2	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF998)
DUF4064	PF13273.1	gi|449067665|ref|YP_007434747.1|	-	9.8	6.3	18.7	0.39	10.8	5.9	2.5	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF4064)
ADH_N	PF08240.7	gi|449067667|ref|YP_007434749.1|	-	1.3e-26	92.5	1.7	1.7e-26	92.1	0.1	2.0	2	0	0	2	2	2	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|449067667|ref|YP_007434749.1|	-	7.6e-26	90.1	2.2	2.2e-25	88.6	0.1	2.6	2	1	1	3	3	3	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|449067667|ref|YP_007434749.1|	-	1.7e-05	25.7	0.0	3.8e-05	24.5	0.0	1.6	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
NAD_binding_10	PF13460.1	gi|449067667|ref|YP_007434749.1|	-	3.9e-05	23.7	0.1	6.1e-05	23.0	0.1	1.3	1	0	0	1	1	1	1	NADH(P)-binding
SIS_2	PF13580.1	gi|449067667|ref|YP_007434749.1|	-	0.0029	17.3	0.1	0.019	14.6	0.0	2.2	2	0	0	2	2	2	1	SIS	domain
TrkA_C	PF02080.16	gi|449067667|ref|YP_007434749.1|	-	0.0075	15.8	0.1	73	3.0	0.0	4.5	4	1	1	5	5	5	0	TrkA-C	domain
Pyr_redox	PF00070.22	gi|449067667|ref|YP_007434749.1|	-	0.01	16.1	0.3	4.9	7.6	0.3	2.5	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
AlaDh_PNT_C	PF01262.16	gi|449067667|ref|YP_007434749.1|	-	0.011	15.3	0.2	0.018	14.5	0.1	1.4	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
ELFV_dehydrog	PF00208.16	gi|449067667|ref|YP_007434749.1|	-	0.015	14.8	0.2	0.023	14.3	0.1	1.3	1	0	0	1	1	1	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
NmrA	PF05368.8	gi|449067667|ref|YP_007434749.1|	-	0.017	14.4	0.1	0.026	13.8	0.1	1.3	1	0	0	1	1	1	0	NmrA-like	family
PALP	PF00291.20	gi|449067667|ref|YP_007434749.1|	-	0.031	13.5	0.0	0.049	12.8	0.0	1.3	1	0	0	1	1	1	0	Pyridoxal-phosphate	dependent	enzyme
2-Hacid_dh_C	PF02826.14	gi|449067667|ref|YP_007434749.1|	-	0.052	12.7	0.1	0.091	11.9	0.0	1.4	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
DFP	PF04127.10	gi|449067667|ref|YP_007434749.1|	-	0.096	12.2	0.0	0.18	11.4	0.0	1.3	1	0	0	1	1	1	0	DNA	/	pantothenate	metabolism	flavoprotein
Oxidored_nitro	PF00148.14	gi|449067667|ref|YP_007434749.1|	-	0.1	11.2	0.0	0.22	10.1	0.0	1.5	2	0	0	2	2	2	0	Nitrogenase	component	1	type	Oxidoreductase
Peptidase_M19	PF01244.16	gi|449067668|ref|YP_007434750.1|	-	1e-73	248.0	0.0	1.2e-73	247.8	0.0	1.0	1	0	0	1	1	1	1	Membrane	dipeptidase	(Peptidase	family	M19)
HMA	PF00403.21	gi|449067669|ref|YP_007434751.1|	-	1.4e-11	44.3	0.0	1.8e-11	43.9	0.0	1.2	1	0	0	1	1	1	1	Heavy-metal-associated	domain
Na_Ca_ex	PF01699.19	gi|449067670|ref|YP_007434752.1|	-	9.8e-34	115.9	28.1	2.1e-19	69.5	7.7	2.1	2	0	0	2	2	2	2	Sodium/calcium	exchanger	protein
Ceramidase	PF05875.7	gi|449067670|ref|YP_007434752.1|	-	3.8	6.5	10.4	0.14	11.2	2.6	1.8	2	0	0	2	2	2	0	Ceramidase
Pkinase	PF00069.20	gi|449067671|ref|YP_007434753.1|	-	1.9e-39	135.4	0.1	2.6e-39	134.9	0.0	1.1	1	0	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|449067671|ref|YP_007434753.1|	-	3.1e-20	72.3	0.0	2.2e-19	69.5	0.0	2.2	1	1	0	1	1	1	1	Protein	tyrosine	kinase
Kinase-like	PF14531.1	gi|449067671|ref|YP_007434753.1|	-	4.7e-06	25.7	0.0	1.3e-05	24.3	0.0	1.6	2	0	0	2	2	2	1	Kinase-like
Kdo	PF06293.9	gi|449067671|ref|YP_007434753.1|	-	0.03	13.3	0.0	0.049	12.6	0.0	1.2	1	0	0	1	1	1	0	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
DUF3381	PF11861.3	gi|449067672|ref|YP_007434754.1|	-	0.0066	15.9	1.3	0.0077	15.7	0.9	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3381)
RE_AlwI	PF09491.5	gi|449067672|ref|YP_007434754.1|	-	0.03	12.8	2.3	0.03	12.7	1.6	1.1	1	0	0	1	1	1	0	AlwI	restriction	endonuclease
GldM_N	PF12081.3	gi|449067672|ref|YP_007434754.1|	-	0.056	12.9	0.9	0.084	12.3	0.6	1.5	1	1	0	1	1	1	0	GldM	N-terminal	domain
IncA	PF04156.9	gi|449067672|ref|YP_007434754.1|	-	0.059	12.9	2.6	0.073	12.6	1.8	1.1	1	0	0	1	1	1	0	IncA	protein
DUF4411	PF14367.1	gi|449067672|ref|YP_007434754.1|	-	0.072	12.7	0.5	0.088	12.5	0.3	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4411)
DUF1759	PF03564.10	gi|449067672|ref|YP_007434754.1|	-	0.088	12.6	2.3	0.11	12.3	1.5	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1759)
RDV-p3	PF09231.5	gi|449067672|ref|YP_007434754.1|	-	0.088	10.2	0.0	0.1	10.0	0.0	1.0	1	0	0	1	1	1	0	Rice	dwarf	virus	p3
DUF3829	PF12889.2	gi|449067672|ref|YP_007434754.1|	-	0.095	11.8	0.5	0.11	11.6	0.3	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3829)
CorA	PF01544.13	gi|449067672|ref|YP_007434754.1|	-	0.098	11.6	2.1	0.11	11.5	1.4	1.0	1	0	0	1	1	1	0	CorA-like	Mg2+	transporter	protein
WD-3	PF09765.4	gi|449067672|ref|YP_007434754.1|	-	0.098	11.9	0.6	0.12	11.6	0.4	1.1	1	0	0	1	1	1	0	WD-repeat	region
Tex_N	PF09371.5	gi|449067672|ref|YP_007434754.1|	-	0.11	11.8	2.9	0.2	10.9	1.4	1.9	1	1	0	1	1	1	0	Tex-like	protein	N-terminal	domain
Rsm22	PF09243.5	gi|449067672|ref|YP_007434754.1|	-	0.11	11.4	0.1	0.13	11.3	0.0	1.1	1	0	0	1	1	1	0	Mitochondrial	small	ribosomal	subunit	Rsm22
DUF4446	PF14584.1	gi|449067672|ref|YP_007434754.1|	-	0.13	12.0	1.3	0.17	11.7	0.9	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4446)
TRAP-gamma	PF07074.7	gi|449067672|ref|YP_007434754.1|	-	0.14	11.6	0.7	0.17	11.3	0.5	1.1	1	0	0	1	1	1	0	Translocon-associated	protein,	gamma	subunit	(TRAP-gamma)
LMBR1	PF04791.11	gi|449067672|ref|YP_007434754.1|	-	0.15	10.6	0.5	0.17	10.3	0.4	1.1	1	0	0	1	1	1	0	LMBR1-like	membrane	protein
HSBP1	PF06825.7	gi|449067672|ref|YP_007434754.1|	-	0.16	11.5	1.8	0.17	11.4	0.2	1.8	2	0	0	2	2	2	0	Heat	shock	factor	binding	protein	1
DUF4047	PF13256.1	gi|449067672|ref|YP_007434754.1|	-	0.16	11.8	4.2	0.2	11.6	2.9	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4047)
DUF2120	PF09893.4	gi|449067672|ref|YP_007434754.1|	-	0.22	11.4	4.4	0.3	11.0	3.1	1.4	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2120)
DUF972	PF06156.8	gi|449067672|ref|YP_007434754.1|	-	0.31	11.4	1.8	0.47	10.8	1.3	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF972)
DUF1319	PF07028.6	gi|449067672|ref|YP_007434754.1|	-	0.32	11.1	7.4	0.81	9.8	3.7	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1319)
Rota_NSP4	PF01452.11	gi|449067672|ref|YP_007434754.1|	-	0.53	9.6	4.6	0.64	9.3	3.2	1.1	1	0	0	1	1	1	0	Rotavirus	non	structural	protein
DUF1703	PF08011.6	gi|449067673|ref|YP_007434755.1|	-	0.079	12.7	1.1	0.099	12.3	0.4	1.7	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1703)
MFS_1	PF07690.11	gi|449067674|ref|YP_007434756.1|	-	2.8e-29	101.9	47.7	1.5e-20	73.1	14.0	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
ABC_tran	PF00005.22	gi|449067676|ref|YP_007434758.1|	-	1.3e-31	109.7	0.0	2.2e-31	108.9	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|449067676|ref|YP_007434758.1|	-	2e-15	57.5	0.7	8.6e-11	42.3	0.0	2.4	3	0	0	3	3	2	2	AAA	domain
AAA_15	PF13175.1	gi|449067676|ref|YP_007434758.1|	-	2.2e-08	33.5	0.1	0.00029	19.9	0.0	2.2	1	1	1	2	2	2	2	AAA	ATPase	domain
UPF0079	PF02367.12	gi|449067676|ref|YP_007434758.1|	-	3e-05	23.6	0.0	0.00011	21.8	0.0	1.9	2	0	0	2	2	2	1	Uncharacterised	P-loop	hydrolase	UPF0079
SMC_N	PF02463.14	gi|449067676|ref|YP_007434758.1|	-	4.9e-05	22.6	0.1	0.21	10.8	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_22	PF13401.1	gi|449067676|ref|YP_007434758.1|	-	7.4e-05	22.8	0.6	0.00035	20.7	0.3	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|449067676|ref|YP_007434758.1|	-	8.9e-05	22.5	0.0	0.00034	20.6	0.0	1.9	1	1	1	2	2	2	1	AAA	ATPase	domain
DUF258	PF03193.11	gi|449067676|ref|YP_007434758.1|	-	0.00022	20.4	0.0	0.00044	19.4	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
IstB_IS21	PF01695.12	gi|449067676|ref|YP_007434758.1|	-	0.00028	20.3	0.4	1.4	8.3	0.0	3.1	2	1	0	2	2	2	2	IstB-like	ATP	binding	protein
AAA_14	PF13173.1	gi|449067676|ref|YP_007434758.1|	-	0.00045	20.1	0.2	0.0049	16.7	0.0	2.4	1	1	1	3	3	3	1	AAA	domain
AAA_33	PF13671.1	gi|449067676|ref|YP_007434758.1|	-	0.0012	18.6	0.0	0.0035	17.2	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|449067676|ref|YP_007434758.1|	-	0.0014	18.1	0.0	0.0034	16.8	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA	PF00004.24	gi|449067676|ref|YP_007434758.1|	-	0.0015	18.7	0.1	0.0052	16.9	0.1	2.1	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_25	PF13481.1	gi|449067676|ref|YP_007434758.1|	-	0.0026	17.1	0.0	0.032	13.6	0.0	2.4	3	0	0	3	3	3	1	AAA	domain
AAA_18	PF13238.1	gi|449067676|ref|YP_007434758.1|	-	0.0034	17.6	1.1	0.014	15.6	0.7	2.1	1	1	0	1	1	1	1	AAA	domain
NB-ARC	PF00931.17	gi|449067676|ref|YP_007434758.1|	-	0.0039	16.0	0.4	0.014	14.2	0.0	2.0	2	0	0	2	2	2	1	NB-ARC	domain
AAA_23	PF13476.1	gi|449067676|ref|YP_007434758.1|	-	0.0067	16.7	3.0	0.018	15.3	2.1	2.0	1	1	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|449067676|ref|YP_007434758.1|	-	0.0077	15.9	1.6	0.021	14.5	0.0	2.2	2	1	1	3	3	3	1	Archaeal	ATPase
NACHT	PF05729.7	gi|449067676|ref|YP_007434758.1|	-	0.0099	15.5	0.1	0.027	14.1	0.0	1.7	2	0	0	2	2	2	1	NACHT	domain
MutS_V	PF00488.16	gi|449067676|ref|YP_007434758.1|	-	0.011	15.1	0.0	0.11	11.9	0.0	2.0	2	0	0	2	2	2	0	MutS	domain	V
Miro	PF08477.8	gi|449067676|ref|YP_007434758.1|	-	0.016	15.6	0.0	0.041	14.3	0.0	1.6	1	0	0	1	1	1	0	Miro-like	protein
AAA_17	PF13207.1	gi|449067676|ref|YP_007434758.1|	-	0.017	15.9	2.0	0.12	13.1	1.4	2.4	1	1	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|449067676|ref|YP_007434758.1|	-	0.018	14.5	0.1	0.29	10.5	0.0	2.2	1	1	0	2	2	2	0	AAA-like	domain
AAA_19	PF13245.1	gi|449067676|ref|YP_007434758.1|	-	0.018	14.7	0.0	0.26	11.0	0.0	2.3	2	0	0	2	2	2	0	Part	of	AAA	domain
AAA_28	PF13521.1	gi|449067676|ref|YP_007434758.1|	-	0.022	14.7	0.1	0.052	13.5	0.1	1.8	1	1	0	1	1	1	0	AAA	domain
NTPase_1	PF03266.10	gi|449067676|ref|YP_007434758.1|	-	0.026	14.2	0.5	0.37	10.4	0.0	2.6	3	0	0	3	3	3	0	NTPase
AAA_24	PF13479.1	gi|449067676|ref|YP_007434758.1|	-	0.035	13.6	0.2	0.15	11.6	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
MobB	PF03205.9	gi|449067676|ref|YP_007434758.1|	-	0.045	13.4	0.1	0.12	12.1	0.0	1.7	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
SbcCD_C	PF13558.1	gi|449067676|ref|YP_007434758.1|	-	0.058	13.3	0.0	0.12	12.3	0.0	1.6	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_5	PF07728.9	gi|449067676|ref|YP_007434758.1|	-	0.061	13.0	0.1	0.12	12.0	0.1	1.8	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
DUF4162	PF13732.1	gi|449067676|ref|YP_007434758.1|	-	0.064	13.7	0.0	0.35	11.4	0.0	2.2	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4162)
AAA_30	PF13604.1	gi|449067676|ref|YP_007434758.1|	-	0.076	12.5	0.0	0.17	11.4	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
cobW	PF02492.14	gi|449067676|ref|YP_007434758.1|	-	0.078	12.4	0.1	0.16	11.4	0.0	1.5	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
MMR_HSR1	PF01926.18	gi|449067676|ref|YP_007434758.1|	-	0.095	12.6	0.5	0.34	10.8	0.3	2.0	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
PPK2	PF03976.9	gi|449067676|ref|YP_007434758.1|	-	0.1	11.8	0.0	0.18	11.0	0.0	1.4	1	0	0	1	1	1	0	Polyphosphate	kinase	2	(PPK2)
Thymidylate_kin	PF02223.12	gi|449067676|ref|YP_007434758.1|	-	0.11	11.9	0.1	0.44	9.9	0.0	2.0	2	0	0	2	2	2	0	Thymidylate	kinase
Zeta_toxin	PF06414.7	gi|449067676|ref|YP_007434758.1|	-	0.13	11.3	0.0	0.27	10.3	0.0	1.5	1	0	0	1	1	1	0	Zeta	toxin
PduV-EutP	PF10662.4	gi|449067676|ref|YP_007434758.1|	-	0.13	11.7	0.0	0.22	11.0	0.0	1.3	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
RNA_helicase	PF00910.17	gi|449067676|ref|YP_007434758.1|	-	0.14	12.3	0.0	0.35	11.0	0.0	1.7	2	0	0	2	2	1	0	RNA	helicase
Aldedh	PF00171.17	gi|449067677|ref|YP_007434759.1|	-	8.5e-164	545.2	0.0	9.5e-164	545.0	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
Xan_ur_permease	PF00860.15	gi|449067678|ref|YP_007434760.1|	-	1.4e-19	69.8	52.2	3.9e-18	65.0	36.2	2.1	1	1	0	1	1	1	1	Permease	family
UPF0114	PF03350.11	gi|449067678|ref|YP_007434760.1|	-	0.014	15.2	0.6	0.014	15.2	0.4	3.2	3	0	0	3	3	3	0	Uncharacterized	protein	family,	UPF0114
Pyr_redox	PF00070.22	gi|449067679|ref|YP_007434761.1|	-	1.4e-18	67.0	5.9	1.5e-17	63.7	0.2	2.7	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.9	gi|449067679|ref|YP_007434761.1|	-	2.1e-18	66.9	0.0	6.8e-17	62.0	0.0	3.2	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|449067679|ref|YP_007434761.1|	-	3.7e-07	29.3	4.2	0.0016	17.3	0.0	3.9	3	1	1	4	4	4	2	FAD	dependent	oxidoreductase
AlaDh_PNT_C	PF01262.16	gi|449067679|ref|YP_007434761.1|	-	9.6e-05	22.0	0.1	0.55	9.7	0.0	2.7	3	0	0	3	3	3	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
Oxidored_nitro	PF00148.14	gi|449067679|ref|YP_007434761.1|	-	0.00082	18.1	0.0	0.0013	17.4	0.0	1.2	1	0	0	1	1	1	1	Nitrogenase	component	1	type	Oxidoreductase
NAD_binding_8	PF13450.1	gi|449067679|ref|YP_007434761.1|	-	0.0021	18.0	0.1	2.9	8.0	0.0	2.4	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_3	PF13738.1	gi|449067679|ref|YP_007434761.1|	-	0.0029	17.6	0.2	0.019	15.0	0.0	2.3	2	1	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|449067679|ref|YP_007434761.1|	-	0.093	11.1	3.7	5.1	5.4	0.0	3.7	2	2	2	4	4	4	0	HI0933-like	protein
NTP_transferase	PF00483.18	gi|449067680|ref|YP_007434762.1|	-	9.4e-54	182.3	0.0	1.2e-53	182.0	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
Hexapep	PF00132.19	gi|449067680|ref|YP_007434762.1|	-	7.4e-07	28.4	8.0	0.023	14.2	0.8	5.6	5	1	1	6	6	6	2	Bacterial	transferase	hexapeptide	(six	repeats)
NTP_transf_3	PF12804.2	gi|449067680|ref|YP_007434762.1|	-	1.6e-06	28.3	0.0	2.2e-06	27.8	0.0	1.3	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Fucokinase	PF07959.7	gi|449067680|ref|YP_007434762.1|	-	2.7e-05	22.9	0.7	5.5e-05	21.8	0.4	1.4	1	1	0	1	1	1	1	L-fucokinase
Hexapep_2	PF14602.1	gi|449067680|ref|YP_007434762.1|	-	0.016	14.7	0.1	0.016	14.7	0.1	4.5	5	0	0	5	5	5	0	Hexapeptide	repeat	of	succinyl-transferase
Epimerase	PF01370.16	gi|449067681|ref|YP_007434763.1|	-	3.1e-57	193.7	0.0	3.8e-57	193.4	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|449067681|ref|YP_007434763.1|	-	1.8e-23	82.8	0.0	2.2e-23	82.5	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
3Beta_HSD	PF01073.14	gi|449067681|ref|YP_007434763.1|	-	1.2e-14	53.7	0.0	1.6e-14	53.2	0.0	1.1	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
Polysacc_synt_2	PF02719.10	gi|449067681|ref|YP_007434763.1|	-	1.6e-14	53.4	0.5	1.9e-13	49.9	0.4	2.3	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.7	gi|449067681|ref|YP_007434763.1|	-	2.1e-12	46.4	0.1	3.7e-11	42.4	0.0	2.1	2	0	0	2	2	2	1	Male	sterility	protein
NAD_binding_10	PF13460.1	gi|449067681|ref|YP_007434763.1|	-	8.1e-09	35.7	0.0	1.3e-08	35.0	0.0	1.4	1	1	0	1	1	1	1	NADH(P)-binding
RmlD_sub_bind	PF04321.12	gi|449067682|ref|YP_007434764.1|	-	8.4e-65	218.4	0.0	9.3e-65	218.3	0.0	1.0	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Epimerase	PF01370.16	gi|449067682|ref|YP_007434764.1|	-	7.8e-14	51.6	0.0	1.2e-13	51.0	0.0	1.4	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
Polysacc_synt_2	PF02719.10	gi|449067682|ref|YP_007434764.1|	-	1.2e-06	27.6	2.0	7.1e-06	25.1	0.1	2.8	1	1	1	3	3	3	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.7	gi|449067682|ref|YP_007434764.1|	-	1.6e-05	23.9	0.0	2.3e-05	23.4	0.0	1.3	1	0	0	1	1	1	1	Male	sterility	protein
dTDP_sugar_isom	PF00908.12	gi|449067683|ref|YP_007434765.1|	-	9.5e-55	184.6	0.0	1.1e-54	184.4	0.0	1.0	1	0	0	1	1	1	1	dTDP-4-dehydrorhamnose	3,5-epimerase
Cupin_4	PF08007.7	gi|449067683|ref|YP_007434765.1|	-	0.079	12.1	0.0	0.11	11.6	0.0	1.1	1	0	0	1	1	1	0	Cupin	superfamily	protein
SBP_bac_11	PF13531.1	gi|449067684|ref|YP_007434766.1|	-	6.1e-26	91.4	0.5	8.5e-26	90.9	0.3	1.2	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_1	PF01547.20	gi|449067684|ref|YP_007434766.1|	-	9.4e-11	41.9	6.9	1.5e-10	41.3	4.8	1.2	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SoxE	PF06525.6	gi|449067684|ref|YP_007434766.1|	-	4.8e-05	22.7	4.1	0.00014	21.1	2.8	1.9	1	0	0	1	1	1	1	Sulfocyanin	(SoxE)
DUF1628	PF07790.6	gi|449067684|ref|YP_007434766.1|	-	0.0041	17.8	1.3	0.01	16.5	0.9	1.7	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1628)
Mycobact_memb	PF05423.8	gi|449067684|ref|YP_007434766.1|	-	0.062	13.0	0.2	0.11	12.2	0.1	1.3	1	0	0	1	1	1	0	Mycobacterium	membrane	protein
Shisa	PF13908.1	gi|449067684|ref|YP_007434766.1|	-	0.064	13.4	0.5	0.13	12.4	0.4	1.6	1	0	0	1	1	1	0	Wnt	and	FGF	inhibitory	regulator
SpoIIIAH	PF12685.2	gi|449067684|ref|YP_007434766.1|	-	0.097	12.1	0.2	0.17	11.3	0.1	1.5	1	0	0	1	1	1	0	SpoIIIAH-like	protein
Chordopox_A13L	PF05961.6	gi|449067684|ref|YP_007434766.1|	-	0.29	11.1	0.0	0.29	11.1	0.0	2.3	2	0	0	2	2	2	0	Chordopoxvirus	A13L	protein
DUF4293	PF14126.1	gi|449067684|ref|YP_007434766.1|	-	0.76	9.6	3.3	0.54	10.1	0.7	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4293)
NVEALA	PF14055.1	gi|449067684|ref|YP_007434766.1|	-	6.1	6.6	5.8	2.2	8.0	1.3	2.3	2	0	0	2	2	2	0	NVEALA	protein
Pyr_redox_2	PF07992.9	gi|449067685|ref|YP_007434767.1|	-	5.6e-36	124.3	0.0	3.8e-35	121.5	0.0	2.8	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|449067685|ref|YP_007434767.1|	-	1.4e-30	105.5	0.1	3.2e-30	104.3	0.0	1.6	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.22	gi|449067685|ref|YP_007434767.1|	-	3.5e-11	43.3	0.0	3.5e-11	43.3	0.0	2.2	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|449067685|ref|YP_007434767.1|	-	1.5e-08	34.9	0.0	2.3e-05	24.5	0.0	2.3	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|449067685|ref|YP_007434767.1|	-	9.4e-08	31.3	9.7	0.00021	20.2	1.4	4.4	4	1	0	4	4	4	2	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.9	gi|449067685|ref|YP_007434767.1|	-	0.00021	19.9	1.3	0.37	9.1	0.0	3.1	3	0	0	3	3	3	2	HI0933-like	protein
FAD_binding_2	PF00890.19	gi|449067685|ref|YP_007434767.1|	-	0.0014	17.5	2.3	0.27	10.0	0.0	2.3	2	0	0	2	2	2	2	FAD	binding	domain
K_oxygenase	PF13434.1	gi|449067685|ref|YP_007434767.1|	-	0.14	11.0	0.4	1.6	7.5	0.0	2.5	3	0	0	3	3	3	0	L-lysine	6-monooxygenase	(NADPH-requiring)
NAD_binding_9	PF13454.1	gi|449067685|ref|YP_007434767.1|	-	0.23	11.2	1.3	4.5	7.0	0.0	2.6	3	0	0	3	3	3	0	FAD-NAD(P)-binding
DAO	PF01266.19	gi|449067685|ref|YP_007434767.1|	-	2.3	7.0	4.7	9.7	4.9	0.0	2.5	3	0	0	3	3	3	0	FAD	dependent	oxidoreductase
zf-FCS	PF06467.9	gi|449067686|ref|YP_007434768.1|	-	3.2e-06	26.6	4.1	4.1e-06	26.3	2.8	1.1	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
Arc_trans_TRASH	PF08394.5	gi|449067686|ref|YP_007434768.1|	-	5.4e-05	23.2	4.3	7.4e-05	22.8	3.0	1.2	1	0	0	1	1	1	1	Archaeal	TRASH	domain
ATPase-cat_bd	PF12156.3	gi|449067686|ref|YP_007434768.1|	-	0.00019	21.8	4.4	0.00022	21.6	3.0	1.1	1	0	0	1	1	1	1	Putative	metal-binding	domain	of	cation	transport	ATPase
YHS	PF04945.8	gi|449067686|ref|YP_007434768.1|	-	0.00024	20.9	1.7	0.00031	20.5	1.2	1.2	1	0	0	1	1	1	1	YHS	domain
Ta0938	PF11494.3	gi|449067686|ref|YP_007434768.1|	-	0.012	15.7	0.7	0.013	15.5	0.5	1.1	1	0	0	1	1	1	0	Ta0938
Zn_Tnp_IS1595	PF12760.2	gi|449067686|ref|YP_007434768.1|	-	0.015	15.1	1.3	0.018	14.8	0.9	1.2	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
Zn_ribbon_2	PF12674.2	gi|449067686|ref|YP_007434768.1|	-	0.049	13.9	3.3	0.059	13.7	2.3	1.1	1	0	0	1	1	1	0	Putative	zinc	ribbon	domain
SprT-like	PF10263.4	gi|449067686|ref|YP_007434768.1|	-	0.061	12.9	0.9	0.072	12.7	0.6	1.2	1	0	0	1	1	1	0	SprT-like	family
HNH_5	PF14279.1	gi|449067686|ref|YP_007434768.1|	-	0.068	13.1	3.6	0.12	12.3	2.5	1.5	1	1	0	1	1	1	0	HNH	endonuclease
DUF2175	PF09943.4	gi|449067686|ref|YP_007434768.1|	-	0.08	12.9	3.0	0.087	12.8	2.1	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2175)
DNA_RNApol_7kD	PF03604.8	gi|449067686|ref|YP_007434768.1|	-	0.081	12.4	3.3	1.3	8.5	0.1	2.2	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zinc_ribbon_4	PF13717.1	gi|449067686|ref|YP_007434768.1|	-	0.097	12.3	3.0	0.81	9.4	0.1	2.1	1	1	1	2	2	2	0	zinc-ribbon	domain
DZR	PF12773.2	gi|449067686|ref|YP_007434768.1|	-	0.099	12.4	3.5	0.17	11.7	2.4	1.5	1	1	0	1	1	1	0	Double	zinc	ribbon
HypA	PF01155.14	gi|449067686|ref|YP_007434768.1|	-	0.1	12.3	4.5	0.72	9.5	3.2	1.9	1	1	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zinc_ribbon_5	PF13719.1	gi|449067686|ref|YP_007434768.1|	-	0.11	12.1	2.9	0.87	9.2	0.1	2.1	1	1	1	2	2	2	0	zinc-ribbon	domain
zf-trcl	PF13451.1	gi|449067686|ref|YP_007434768.1|	-	0.12	12.0	4.8	4.1	7.1	1.1	2.2	2	0	0	2	2	2	0	Probable	zinc-binding	domain
LIM	PF00412.17	gi|449067686|ref|YP_007434768.1|	-	0.14	12.2	7.4	4.8	7.3	5.0	2.0	1	1	0	1	1	1	0	LIM	domain
zf-FPG_IleRS	PF06827.9	gi|449067686|ref|YP_007434768.1|	-	0.16	11.6	3.4	6.2	6.5	2.4	2.2	1	1	0	1	1	1	0	Zinc	finger	found	in	FPG	and	IleRS
Zn_ribbon_recom	PF13408.1	gi|449067686|ref|YP_007434768.1|	-	0.23	11.7	2.4	0.3	11.3	1.7	1.2	1	0	0	1	1	1	0	Recombinase	zinc	beta	ribbon	domain
Zn-ribbon_8	PF09723.5	gi|449067686|ref|YP_007434768.1|	-	0.28	11.1	6.8	2.6	8.0	0.1	2.2	1	1	0	2	2	2	0	Zinc	ribbon	domain
DUF678	PF05077.7	gi|449067686|ref|YP_007434768.1|	-	0.36	10.8	2.2	0.59	10.1	0.1	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF678)
zf-H2C2_2	PF13465.1	gi|449067686|ref|YP_007434768.1|	-	0.37	11.1	5.5	3.9	7.9	1.3	2.2	2	0	0	2	2	2	0	Zinc-finger	double	domain
PhnA_Zn_Ribbon	PF08274.7	gi|449067686|ref|YP_007434768.1|	-	0.4	10.4	7.9	9.1	6.1	5.5	2.1	1	1	0	1	1	1	0	PhnA	Zinc-Ribbon
DUF164	PF02591.10	gi|449067686|ref|YP_007434768.1|	-	0.43	10.4	2.3	0.64	9.8	1.6	1.4	1	1	0	1	1	1	0	Putative	zinc	ribbon	domain
Metallothio_Pro	PF02069.11	gi|449067686|ref|YP_007434768.1|	-	0.48	10.2	4.3	0.84	9.5	3.0	1.5	1	1	0	1	1	1	0	Prokaryotic	metallothionein
OrfB_Zn_ribbon	PF07282.6	gi|449067686|ref|YP_007434768.1|	-	0.56	9.9	4.9	0.9	9.2	0.1	2.0	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
zf-C3HC4_3	PF13920.1	gi|449067686|ref|YP_007434768.1|	-	0.77	9.4	4.9	3	7.5	3.3	1.8	1	1	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
Prok-RING_1	PF14446.1	gi|449067686|ref|YP_007434768.1|	-	1	9.1	5.5	15	5.3	3.8	2.0	1	1	0	1	1	1	0	Prokaryotic	RING	finger	family	1
zf-C2H2	PF00096.21	gi|449067686|ref|YP_007434768.1|	-	1.4	9.3	6.8	22	5.6	2.5	2.4	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
Sgf11	PF08209.6	gi|449067686|ref|YP_007434768.1|	-	1.5	8.1	6.9	4.7	6.6	0.2	2.2	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
Evr1_Alr	PF04777.8	gi|449067686|ref|YP_007434768.1|	-	1.9	8.4	5.2	7.7	6.4	3.6	1.8	1	1	0	1	1	1	0	Erv1	/	Alr	family
PyrI_C	PF02748.10	gi|449067686|ref|YP_007434768.1|	-	2	7.9	7.1	0.16	11.4	0.4	1.9	1	1	1	2	2	2	0	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
zf-BED	PF02892.10	gi|449067686|ref|YP_007434768.1|	-	7.5	6.4	7.2	3.7	7.3	0.3	2.0	1	1	1	2	2	2	0	BED	zinc	finger
HTH_5	PF01022.15	gi|449067687|ref|YP_007434769.1|	-	4.8e-16	58.1	0.9	7.8e-16	57.4	0.6	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|449067687|ref|YP_007434769.1|	-	7.2e-11	41.7	0.1	1.1e-10	41.1	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|449067687|ref|YP_007434769.1|	-	5.8e-07	29.1	0.0	1.1e-06	28.2	0.0	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_34	PF13601.1	gi|449067687|ref|YP_007434769.1|	-	1.4e-05	25.0	0.1	2.4e-05	24.2	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
Rrf2	PF02082.15	gi|449067687|ref|YP_007434769.1|	-	0.00055	20.0	0.0	0.00078	19.5	0.0	1.3	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_24	PF13412.1	gi|449067687|ref|YP_007434769.1|	-	0.00063	19.0	0.1	0.0011	18.2	0.1	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TFIIE_alpha	PF02002.12	gi|449067687|ref|YP_007434769.1|	-	0.0021	17.5	1.0	0.0057	16.1	0.7	1.7	1	1	0	1	1	1	1	TFIIE	alpha	subunit
HTH_11	PF08279.7	gi|449067687|ref|YP_007434769.1|	-	0.0025	17.4	0.0	0.0045	16.6	0.0	1.5	1	0	0	1	1	1	1	HTH	domain
HTH_38	PF13936.1	gi|449067687|ref|YP_007434769.1|	-	0.005	16.3	0.0	0.0088	15.5	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_40	PF14493.1	gi|449067687|ref|YP_007434769.1|	-	0.0053	16.9	0.4	0.017	15.2	0.3	1.8	1	1	0	1	1	1	1	Helix-turn-helix	domain
Sigma70_r4	PF04545.11	gi|449067687|ref|YP_007434769.1|	-	0.0058	15.9	0.0	0.069	12.4	0.0	2.1	2	0	0	2	2	2	1	Sigma-70,	region	4
MarR_2	PF12802.2	gi|449067687|ref|YP_007434769.1|	-	0.0071	15.9	0.1	0.0099	15.5	0.1	1.2	1	0	0	1	1	1	1	MarR	family
Phage_rep_org_N	PF09681.5	gi|449067687|ref|YP_007434769.1|	-	0.0083	15.6	0.0	0.011	15.2	0.0	1.2	1	0	0	1	1	1	1	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
HTH_23	PF13384.1	gi|449067687|ref|YP_007434769.1|	-	0.019	14.5	0.0	0.031	13.9	0.0	1.4	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_Tnp_Tc3_1	PF11427.3	gi|449067687|ref|YP_007434769.1|	-	0.037	13.6	0.4	0.084	12.5	0.3	1.6	1	0	0	1	1	1	0	Tc3	transposase
KorB	PF08535.5	gi|449067687|ref|YP_007434769.1|	-	0.038	14.1	0.0	0.068	13.3	0.0	1.6	1	1	0	1	1	1	0	KorB	domain
HTH_9	PF08221.6	gi|449067687|ref|YP_007434769.1|	-	0.052	13.4	0.6	0.098	12.5	0.4	1.4	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
Phage_RpbA	PF10789.4	gi|449067687|ref|YP_007434769.1|	-	0.055	13.3	0.1	0.085	12.7	0.0	1.3	1	0	0	1	1	1	0	Phage	RNA	polymerase	binding,	RpbA
DUF2551	PF10826.3	gi|449067687|ref|YP_007434769.1|	-	0.072	12.9	0.2	0.18	11.7	0.2	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2551)
Spc7	PF08317.6	gi|449067687|ref|YP_007434769.1|	-	0.091	11.4	0.7	0.44	9.1	0.1	1.9	2	0	0	2	2	2	0	Spc7	kinetochore	protein
Penicillinase_R	PF03965.11	gi|449067687|ref|YP_007434769.1|	-	0.1	12.6	0.2	0.3	11.1	0.1	1.8	1	1	1	2	2	2	0	Penicillinase	repressor
LexA_DNA_bind	PF01726.11	gi|449067687|ref|YP_007434769.1|	-	0.11	12.0	0.0	0.21	11.2	0.0	1.4	1	0	0	1	1	1	0	LexA	DNA	binding	domain
Arg_repressor	PF01316.16	gi|449067687|ref|YP_007434769.1|	-	0.11	12.0	0.1	0.29	10.7	0.0	1.8	1	1	0	1	1	1	0	Arginine	repressor,	DNA	binding	domain
Voltage_CLC	PF00654.15	gi|449067688|ref|YP_007434770.1|	-	1.5e-93	313.6	36.5	7.8e-93	311.3	20.4	2.1	2	0	0	2	2	2	2	Voltage	gated	chloride	channel
CBS	PF00571.23	gi|449067688|ref|YP_007434770.1|	-	9.8e-19	66.8	0.6	2.1e-08	33.7	0.1	2.5	2	0	0	2	2	2	2	CBS	domain
DUF2589	PF11655.3	gi|449067688|ref|YP_007434770.1|	-	0.0014	18.8	0.0	0.0023	18.0	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2589)
Acyl-CoA_dh_1	PF00441.19	gi|449067690|ref|YP_007434772.1|	-	3.1e-31	108.5	0.0	4.6e-31	107.9	0.0	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|449067690|ref|YP_007434772.1|	-	1.9e-16	59.2	0.0	4.3e-16	58.1	0.0	1.6	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.6	gi|449067690|ref|YP_007434772.1|	-	3.2e-10	40.3	0.0	5.2e-10	39.6	0.0	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.11	gi|449067690|ref|YP_007434772.1|	-	3.3e-07	30.8	0.0	6e-07	30.0	0.0	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Thermopsin	PF05317.6	gi|449067691|ref|YP_007434773.1|	-	5.9e-91	304.0	27.8	7.6e-91	303.7	19.2	1.1	1	0	0	1	1	1	1	Thermopsin
ILVD_EDD	PF00920.16	gi|449067692|ref|YP_007434774.1|	-	6.1e-213	707.9	2.1	6.9e-213	707.7	1.4	1.0	1	0	0	1	1	1	1	Dehydratase	family
GRIM-19	PF06212.7	gi|449067693|ref|YP_007434775.1|	-	0.027	14.1	0.1	0.027	14.1	0.0	1.2	1	0	0	1	1	1	0	GRIM-19	protein
DUF1947	PF09183.5	gi|449067693|ref|YP_007434775.1|	-	0.029	14.1	0.0	0.035	13.8	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1947)
KIAA1430	PF13879.1	gi|449067693|ref|YP_007434775.1|	-	0.11	12.8	0.8	0.15	12.5	0.6	1.2	1	0	0	1	1	1	0	KIAA1430	homologue
DUF220	PF02713.9	gi|449067693|ref|YP_007434775.1|	-	0.13	11.9	0.5	0.2	11.3	0.3	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	DUF220
DUF2204	PF09970.4	gi|449067694|ref|YP_007434776.1|	-	0.012	15.1	0.2	0.062	12.7	0.0	2.0	2	1	0	2	2	2	0	Nucleotidyl	transferase	of	unknown	function	(DUF2204)
PsbH	PF00737.15	gi|449067695|ref|YP_007434777.1|	-	0.087	12.4	1.8	0.14	11.7	1.2	1.6	1	1	0	1	1	1	0	Photosystem	II	10	kDa	phosphoprotein
OppC_N	PF12911.2	gi|449067695|ref|YP_007434777.1|	-	0.12	11.7	5.4	0.27	10.6	3.7	1.7	1	1	0	1	1	1	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
DUF2613	PF11021.3	gi|449067695|ref|YP_007434777.1|	-	2.1	8.1	4.5	2.6	7.8	2.7	1.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2613)
DLH	PF01738.13	gi|449067696|ref|YP_007434778.1|	-	3.1e-68	229.3	0.0	6.8e-68	228.1	0.0	1.5	1	1	0	1	1	1	1	Dienelactone	hydrolase	family
Abhydrolase_5	PF12695.2	gi|449067696|ref|YP_007434778.1|	-	2.1e-11	43.7	0.0	3.1e-11	43.2	0.0	1.3	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_6	PF12697.2	gi|449067696|ref|YP_007434778.1|	-	6.1e-06	26.2	0.0	0.041	13.7	0.0	2.2	1	1	1	2	2	2	2	Alpha/beta	hydrolase	family
Abhydrolase_2	PF02230.11	gi|449067696|ref|YP_007434778.1|	-	0.00047	19.6	0.0	0.00073	19.0	0.0	1.2	1	0	0	1	1	1	1	Phospholipase/Carboxylesterase
Peptidase_S9	PF00326.16	gi|449067696|ref|YP_007434778.1|	-	0.027	13.6	0.0	0.55	9.4	0.0	2.1	2	0	0	2	2	2	0	Prolyl	oligopeptidase	family
Abhydrolase_3	PF07859.8	gi|449067696|ref|YP_007434778.1|	-	0.03	13.9	0.0	1.2	8.6	0.0	2.3	1	1	1	2	2	2	0	alpha/beta	hydrolase	fold
DUF3791	PF12668.2	gi|449067696|ref|YP_007434778.1|	-	0.048	13.2	0.0	0.089	12.4	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3791)
Chlorophyllase	PF07224.6	gi|449067696|ref|YP_007434778.1|	-	0.12	11.1	0.0	0.33	9.7	0.0	1.6	2	0	0	2	2	2	0	Chlorophyllase
Chlorophyllase2	PF12740.2	gi|449067696|ref|YP_007434778.1|	-	0.12	11.2	0.0	0.19	10.5	0.0	1.5	1	1	0	1	1	1	0	Chlorophyllase	enzyme
BAAT_C	PF08840.6	gi|449067696|ref|YP_007434778.1|	-	0.16	11.6	0.0	12	5.4	0.0	2.3	2	0	0	2	2	2	0	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
DUF72	PF01904.13	gi|449067698|ref|YP_007434780.1|	-	2e-46	158.6	0.1	2.2e-46	158.4	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF72
RVT_3	PF13456.1	gi|449067699|ref|YP_007434781.1|	-	1.1e-16	60.3	0.0	1.4e-16	60.0	0.0	1.1	1	0	0	1	1	1	1	Reverse	transcriptase-like
RNase_H	PF00075.19	gi|449067699|ref|YP_007434781.1|	-	3e-07	30.8	0.0	3.8e-07	30.5	0.0	1.1	1	0	0	1	1	1	1	RNase	H
DUF1465	PF07323.7	gi|449067699|ref|YP_007434781.1|	-	0.029	13.9	0.0	0.041	13.4	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1465)
Flavin_Reduct	PF01613.13	gi|449067700|ref|YP_007434782.1|	-	6.7e-20	71.5	0.0	7.9e-20	71.2	0.0	1.0	1	0	0	1	1	1	1	Flavin	reductase	like	domain
Fanconi_A	PF03511.9	gi|449067701|ref|YP_007434783.1|	-	0.059	13.1	0.0	0.081	12.7	0.0	1.2	1	0	0	1	1	1	0	Fanconi	anaemia	group	A	protein
Peptidase_M61	PF05299.7	gi|449067702|ref|YP_007434784.1|	-	2.1e-30	105.2	0.0	3.5e-30	104.4	0.0	1.3	1	0	0	1	1	1	1	M61	glycyl	aminopeptidase
Peptidase_MA_2	PF13485.1	gi|449067702|ref|YP_007434784.1|	-	1.5e-08	34.7	0.0	2.4e-08	34.0	0.0	1.4	1	0	0	1	1	1	1	Peptidase	MA	superfamily
PDZ_2	PF13180.1	gi|449067702|ref|YP_007434784.1|	-	0.0019	18.0	0.4	0.046	13.6	0.0	2.6	1	1	0	2	2	2	1	PDZ	domain
PDZ	PF00595.19	gi|449067702|ref|YP_007434784.1|	-	0.05	13.7	0.0	0.15	12.2	0.0	1.7	1	0	0	1	1	1	0	PDZ	domain	(Also	known	as	DHR	or	GLGF)
GRASP55_65	PF04495.9	gi|449067702|ref|YP_007434784.1|	-	0.064	13.2	0.0	0.14	12.1	0.0	1.6	1	0	0	1	1	1	0	GRASP55/65	PDZ-like	domain
Nup35_RRM	PF05172.8	gi|449067702|ref|YP_007434784.1|	-	0.093	12.4	0.0	0.21	11.3	0.0	1.5	1	0	0	1	1	1	0	Nup53/35/40-type	RNA	recognition	motif
Sugar_tr	PF00083.19	gi|449067703|ref|YP_007434785.1|	-	4e-42	144.3	28.1	4.8e-42	144.0	19.5	1.0	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|449067703|ref|YP_007434785.1|	-	7.9e-35	120.1	51.1	9.9e-28	96.8	25.4	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
DUF1228	PF06779.9	gi|449067703|ref|YP_007434785.1|	-	0.0061	16.5	0.4	0.0061	16.5	0.3	3.4	3	1	0	3	3	3	1	Protein	of	unknown	function	(DUF1228)
PPR_1	PF12854.2	gi|449067703|ref|YP_007434785.1|	-	0.087	12.3	0.1	0.21	11.1	0.1	1.6	1	0	0	1	1	1	0	PPR	repeat
PPR	PF01535.15	gi|449067703|ref|YP_007434785.1|	-	0.097	12.6	0.1	0.25	11.3	0.0	1.7	1	0	0	1	1	1	0	PPR	repeat
CoA_transf_3	PF02515.12	gi|449067704|ref|YP_007434786.1|	-	4.5e-31	107.5	0.0	9.2e-31	106.5	0.0	1.5	1	1	0	1	1	1	1	CoA-transferase	family	III
DUF1028	PF06267.7	gi|449067705|ref|YP_007434787.1|	-	5.7e-69	231.3	0.0	7.6e-69	230.9	0.0	1.2	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF1028)
PG_binding_2	PF08823.6	gi|449067705|ref|YP_007434787.1|	-	1.3e-13	50.8	0.1	3e-13	49.6	0.1	1.7	1	0	0	1	1	1	1	Putative	peptidoglycan	binding	domain
Thiolase_C	PF02803.13	gi|449067706|ref|YP_007434788.1|	-	1.6e-06	27.5	0.1	4.9e-06	25.9	0.1	1.7	2	0	0	2	2	2	1	Thiolase,	C-terminal	domain
ACP_syn_III	PF08545.5	gi|449067706|ref|YP_007434788.1|	-	9.2e-06	25.2	0.0	0.00023	20.7	0.1	2.4	2	0	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Thiolase_N	PF00108.18	gi|449067706|ref|YP_007434788.1|	-	0.00078	18.5	0.3	0.0041	16.1	0.0	2.2	3	0	0	3	3	3	1	Thiolase,	N-terminal	domain
HypA	PF01155.14	gi|449067707|ref|YP_007434789.1|	-	0.00031	20.3	0.4	0.00046	19.8	0.3	1.3	1	0	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
zf-ribbon_3	PF13248.1	gi|449067707|ref|YP_007434789.1|	-	0.0022	17.1	2.1	0.0022	17.1	1.4	1.8	2	0	0	2	2	2	1	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.2	gi|449067707|ref|YP_007434789.1|	-	0.0026	17.5	1.6	0.17	11.7	0.0	2.4	2	0	0	2	2	2	1	Transposase	zinc-ribbon	domain
FdhE	PF04216.7	gi|449067707|ref|YP_007434789.1|	-	0.0041	16.8	0.9	0.0049	16.6	0.6	1.1	1	0	0	1	1	1	1	Protein	involved	in	formate	dehydrogenase	formation
zinc_ribbon_4	PF13717.1	gi|449067707|ref|YP_007434789.1|	-	0.0043	16.7	3.9	0.3	10.8	2.7	2.5	1	1	0	1	1	1	1	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|449067707|ref|YP_007434789.1|	-	0.0059	16.1	4.2	0.39	10.3	2.9	2.5	1	1	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|449067707|ref|YP_007434789.1|	-	0.0089	15.8	1.7	0.0089	15.8	1.1	1.7	2	0	0	2	2	2	1	Double	zinc	ribbon
zf-ISL3	PF14690.1	gi|449067707|ref|YP_007434789.1|	-	0.0097	15.9	0.5	0.19	11.7	0.0	2.3	2	0	0	2	2	2	1	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Ribosomal_L37e	PF01907.14	gi|449067707|ref|YP_007434789.1|	-	0.016	14.9	3.0	0.028	14.2	2.1	1.4	1	0	0	1	1	1	0	Ribosomal	protein	L37e
DUF2082	PF09855.4	gi|449067707|ref|YP_007434789.1|	-	0.018	14.9	4.0	0.47	10.3	0.1	2.3	2	0	0	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
DUF2072	PF09845.4	gi|449067707|ref|YP_007434789.1|	-	0.02	14.8	1.0	0.028	14.3	0.7	1.3	1	0	0	1	1	1	0	Zn-ribbon	containing	protein	(DUF2072)
DUF35_N	PF12172.3	gi|449067707|ref|YP_007434789.1|	-	0.024	14.5	1.0	0.046	13.6	0.7	1.5	1	0	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
NRDD	PF13597.1	gi|449067707|ref|YP_007434789.1|	-	0.026	12.6	0.4	0.028	12.5	0.3	1.1	1	0	0	1	1	1	0	Anaerobic	ribonucleoside-triphosphate	reductase
TF_Zn_Ribbon	PF08271.7	gi|449067707|ref|YP_007434789.1|	-	0.038	13.3	1.6	2.7	7.3	0.1	2.5	2	0	0	2	2	2	0	TFIIB	zinc-binding
TFIIS_C	PF01096.13	gi|449067707|ref|YP_007434789.1|	-	0.045	13.3	5.6	1.9	8.2	0.1	2.6	3	0	0	3	3	2	0	Transcription	factor	S-II	(TFIIS)
UPF0547	PF10571.4	gi|449067707|ref|YP_007434789.1|	-	0.047	13.3	3.1	1.4	8.6	0.1	2.5	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zf-C3HC4_3	PF13920.1	gi|449067707|ref|YP_007434789.1|	-	0.053	13.1	2.5	0.088	12.4	0.7	1.9	2	0	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
zf-H2C2_2	PF13465.1	gi|449067707|ref|YP_007434789.1|	-	0.1	12.9	2.4	2	8.8	0.1	2.4	2	0	0	2	2	2	0	Zinc-finger	double	domain
A2L_zn_ribbon	PF08792.5	gi|449067707|ref|YP_007434789.1|	-	0.11	11.9	7.4	0.9	9.0	0.3	3.1	3	0	0	3	3	3	0	A2L	zinc	ribbon	domain
zf-LITAF-like	PF10601.4	gi|449067707|ref|YP_007434789.1|	-	0.11	12.3	0.8	0.19	11.6	0.0	1.9	1	1	1	2	2	2	0	LITAF-like	zinc	ribbon	domain
DNA_RNApol_7kD	PF03604.8	gi|449067707|ref|YP_007434789.1|	-	0.18	11.2	4.5	0.5	9.8	3.1	1.7	1	0	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-C2H2	PF00096.21	gi|449067707|ref|YP_007434789.1|	-	0.19	12.1	6.1	0.98	9.8	0.8	2.6	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
zf-C2H2_4	PF13894.1	gi|449067707|ref|YP_007434789.1|	-	0.27	11.6	1.7	16	6.0	0.2	2.4	2	0	0	2	2	2	0	C2H2-type	zinc	finger
FYVE	PF01363.16	gi|449067707|ref|YP_007434789.1|	-	0.3	11.0	3.6	0.37	10.7	2.5	1.4	1	1	0	1	1	1	0	FYVE	zinc	finger
Zn_ribbon_recom	PF13408.1	gi|449067707|ref|YP_007434789.1|	-	0.39	11.0	4.3	15	5.9	3.0	2.4	1	1	0	1	1	1	0	Recombinase	zinc	beta	ribbon	domain
Zn-ribbon_8	PF09723.5	gi|449067707|ref|YP_007434789.1|	-	0.4	10.6	6.9	8.4	6.4	4.8	2.3	1	1	0	1	1	1	0	Zinc	ribbon	domain
zf-C2H2_6	PF13912.1	gi|449067707|ref|YP_007434789.1|	-	0.5	10.3	3.7	0.83	9.6	0.4	2.4	2	0	0	2	2	2	0	C2H2-type	zinc	finger
Ogr_Delta	PF04606.7	gi|449067707|ref|YP_007434789.1|	-	0.67	9.6	3.6	15	5.2	0.1	2.9	3	0	0	3	3	3	0	Ogr/Delta-like	zinc	finger
zinc_ribbon_2	PF13240.1	gi|449067707|ref|YP_007434789.1|	-	1.4	8.5	10.2	0.3	10.6	4.0	2.2	2	1	0	2	2	1	0	zinc-ribbon	domain
zf-HIT	PF04438.11	gi|449067707|ref|YP_007434789.1|	-	2.4	7.8	7.1	7.8	6.2	0.7	2.5	2	0	0	2	2	2	0	HIT	zinc	finger
DUF3797	PF12677.2	gi|449067707|ref|YP_007434789.1|	-	3	7.5	5.1	1.1	8.9	0.3	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3797)
Rubredoxin	PF00301.15	gi|449067707|ref|YP_007434789.1|	-	6.4	6.7	6.8	7.3	6.5	0.3	2.5	1	1	1	2	2	2	0	Rubredoxin
DUF4352	PF11611.3	gi|449067708|ref|YP_007434790.1|	-	0.0025	17.9	1.0	0.0025	17.9	0.7	2.2	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4352)
Sugar_tr	PF00083.19	gi|449067709|ref|YP_007434791.1|	-	1.3e-21	76.7	48.9	4.8e-19	68.2	33.9	2.1	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|449067709|ref|YP_007434791.1|	-	3e-16	59.0	57.8	3e-16	59.0	40.0	1.7	1	1	0	1	1	1	1	Major	Facilitator	Superfamily
Protoglobin	PF11563.3	gi|449067710|ref|YP_007434792.1|	-	0.13	11.8	0.0	0.22	11.1	0.0	1.3	1	0	0	1	1	1	0	Protoglobin
FA_hydroxylase	PF04116.8	gi|449067711|ref|YP_007434793.1|	-	3.9e-09	36.9	18.5	4.9e-09	36.5	12.8	1.1	1	0	0	1	1	1	1	Fatty	acid	hydroxylase	superfamily
SQS_PSY	PF00494.14	gi|449067712|ref|YP_007434794.1|	-	9.5e-51	172.6	0.1	1.1e-50	172.4	0.1	1.0	1	0	0	1	1	1	1	Squalene/phytoene	synthase
RelB_N	PF12910.2	gi|449067714|ref|YP_007434796.1|	-	0.033	13.5	0.5	5.1	6.5	0.0	2.3	2	0	0	2	2	2	0	Antitoxin	of	toxin-antitoxin	stability	system	N-terminal
PhdYeFM_antitox	PF02604.14	gi|449067714|ref|YP_007434796.1|	-	0.13	11.8	0.1	7.2	6.2	0.0	2.6	3	0	0	3	3	3	0	Antitoxin	Phd_YefM,	type	II	toxin-antitoxin	system
BetaGal_dom3	PF13363.1	gi|449067715|ref|YP_007434797.1|	-	0.053	12.9	4.9	6.7	6.1	0.0	4.1	4	0	0	4	4	4	0	Beta-galactosidase,	domain	3
HCV_NS4a	PF01006.15	gi|449067715|ref|YP_007434797.1|	-	0.062	12.8	8.3	0.31	10.6	1.2	3.5	4	0	0	4	4	4	0	Hepatitis	C	virus	non-structural	protein	NS4a
DUF4064	PF13273.1	gi|449067715|ref|YP_007434797.1|	-	0.25	11.4	5.9	0.073	13.1	0.3	2.8	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF4064)
Rifin_STEVOR	PF02009.11	gi|449067715|ref|YP_007434797.1|	-	2.5	7.6	4.4	4.9	6.7	3.0	1.5	1	0	0	1	1	1	0	Rifin/stevor	family
Aldedh	PF00171.17	gi|449067716|ref|YP_007434798.1|	-	7.4e-147	489.4	0.0	8.4e-147	489.2	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
LuxC	PF05893.9	gi|449067716|ref|YP_007434798.1|	-	0.025	13.2	0.1	0.056	12.1	0.0	1.5	2	0	0	2	2	2	0	Acyl-CoA	reductase	(LuxC)
Amidohydro_2	PF04909.9	gi|449067717|ref|YP_007434799.1|	-	1e-49	169.5	0.2	1.2e-49	169.3	0.1	1.0	1	0	0	1	1	1	1	Amidohydrolase
SprT-like	PF10263.4	gi|449067718|ref|YP_007434800.1|	-	0.062	12.9	0.0	0.069	12.8	0.0	1.1	1	0	0	1	1	1	0	SprT-like	family
Hjc	PF01870.13	gi|449067719|ref|YP_007434801.1|	-	4.9e-26	90.1	0.1	6.5e-26	89.7	0.1	1.2	1	0	0	1	1	1	1	Archaeal	holliday	junction	resolvase	(hjc)
DUF2451	PF10474.4	gi|449067719|ref|YP_007434801.1|	-	0.056	13.1	0.1	0.07	12.8	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	C-terminus	(DUF2451)
Endonuc-MspI	PF09208.5	gi|449067719|ref|YP_007434801.1|	-	0.07	12.1	0.3	0.12	11.4	0.1	1.3	2	0	0	2	2	2	0	Restriction	endonuclease	MspI
Ald_Xan_dh_C2	PF02738.13	gi|449067720|ref|YP_007434802.1|	-	6.7e-114	381.1	0.0	9.3e-114	380.7	0.0	1.1	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|449067720|ref|YP_007434802.1|	-	1.1e-22	80.1	0.0	2.8e-22	78.8	0.0	1.8	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
TPP_enzyme_N	PF02776.13	gi|449067721|ref|YP_007434803.1|	-	7.6e-33	113.4	0.0	1.3e-32	112.6	0.0	1.4	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|449067721|ref|YP_007434803.1|	-	2.6e-14	53.0	0.0	5.1e-14	52.1	0.0	1.5	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.17	gi|449067721|ref|YP_007434803.1|	-	4e-11	42.8	0.0	9.5e-11	41.6	0.0	1.6	1	1	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
DUF3311	PF11755.3	gi|449067722|ref|YP_007434804.1|	-	5.1e-14	51.5	11.3	5.7e-14	51.4	7.8	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3311)
DUF485	PF04341.7	gi|449067722|ref|YP_007434804.1|	-	0.16	11.7	9.4	0.18	11.5	6.5	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF485
DctQ	PF04290.7	gi|449067722|ref|YP_007434804.1|	-	0.21	11.3	8.3	0.27	10.9	5.8	1.1	1	0	0	1	1	1	0	Tripartite	ATP-independent	periplasmic	transporters,	DctQ	component
DUF4212	PF13937.1	gi|449067722|ref|YP_007434804.1|	-	2.5	8.1	7.4	3.4	7.7	5.2	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4212)
SSF	PF00474.12	gi|449067723|ref|YP_007434805.1|	-	7.8e-17	60.9	33.6	7.8e-17	60.9	23.3	1.7	2	0	0	2	2	2	1	Sodium:solute	symporter	family
Adeno_E3_14_5	PF04834.7	gi|449067723|ref|YP_007434805.1|	-	0.14	12.6	1.2	0.68	10.3	0.1	2.8	2	0	0	2	2	2	0	Early	E3	14.5	kDa	protein
SoxE	PF06525.6	gi|449067725|ref|YP_007434807.1|	-	3e-94	313.8	18.7	3e-94	313.8	13.0	1.9	2	0	0	2	2	2	1	Sulfocyanin	(SoxE)
BofA	PF07441.6	gi|449067726|ref|YP_007434808.1|	-	0.099	12.6	12.6	0.084	12.8	0.7	2.6	1	1	1	2	2	2	0	SigmaK-factor	processing	regulatory	protein	BofA
Band_7	PF01145.20	gi|449067727|ref|YP_007434809.1|	-	1.5e-20	73.8	1.3	2.4e-20	73.1	0.9	1.4	1	0	0	1	1	1	1	SPFH	domain	/	Band	7	family
Band_7_1	PF13421.1	gi|449067727|ref|YP_007434809.1|	-	3.1e-14	52.9	0.2	7.9e-14	51.6	0.2	1.6	1	1	0	1	1	1	1	SPFH	domain-Band	7	family
Citrate_synt	PF00285.16	gi|449067728|ref|YP_007434810.1|	-	0.059	12.1	0.1	2.3	6.8	0.0	2.0	1	1	1	2	2	2	0	Citrate	synthase
DUF1741	PF08427.5	gi|449067728|ref|YP_007434810.1|	-	0.066	12.6	0.6	0.088	12.2	0.4	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1741)
CAMP_factor	PF07373.6	gi|449067728|ref|YP_007434810.1|	-	0.086	12.3	0.4	0.11	12.0	0.3	1.3	1	0	0	1	1	1	0	CAMP	factor	(Cfa)
DUF2281	PF10047.4	gi|449067729|ref|YP_007434811.1|	-	0.00033	20.8	0.3	0.0044	17.2	0.1	2.1	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2281)
MgtE_N	PF03448.12	gi|449067729|ref|YP_007434811.1|	-	0.0044	17.3	0.6	0.0064	16.7	0.4	1.3	1	1	0	1	1	1	1	MgtE	intracellular	N	domain
DUF2314	PF10077.4	gi|449067729|ref|YP_007434811.1|	-	0.043	13.8	0.0	0.045	13.8	0.0	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2314)
PRANC	PF09372.5	gi|449067729|ref|YP_007434811.1|	-	0.091	12.7	1.3	0.17	11.8	0.6	1.8	1	1	1	2	2	2	0	PRANC	domain
Gemini_mov	PF01708.11	gi|449067732|ref|YP_007434814.1|	-	0.0043	16.5	1.1	0.006	16.0	0.7	1.1	1	0	0	1	1	1	1	Geminivirus	putative	movement	protein
DUF1422	PF07226.6	gi|449067732|ref|YP_007434814.1|	-	0.062	13.0	1.2	0.074	12.7	0.8	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1422)
LAB_N	PF07578.6	gi|449067732|ref|YP_007434814.1|	-	0.096	12.6	3.2	0.11	12.4	1.5	1.5	1	1	0	1	1	1	0	Lipid	A	Biosynthesis	N-terminal	domain
SLAC1	PF03595.12	gi|449067734|ref|YP_007434816.1|	-	2.4e-48	164.4	34.5	3e-48	164.1	23.9	1.1	1	0	0	1	1	1	1	Voltage-dependent	anion	channel
COX2_TM	PF02790.10	gi|449067734|ref|YP_007434816.1|	-	0.025	14.5	0.4	0.025	14.5	0.3	3.2	2	1	1	3	3	3	0	Cytochrome	C	oxidase	subunit	II,	transmembrane	domain
UDG	PF03167.14	gi|449067735|ref|YP_007434817.1|	-	2.3e-28	98.6	0.0	2.6e-28	98.4	0.0	1.0	1	0	0	1	1	1	1	Uracil	DNA	glycosylase	superfamily
Planc_extracel	PF07595.7	gi|449067735|ref|YP_007434817.1|	-	0.058	13.0	0.4	0.12	12.1	0.3	1.5	1	0	0	1	1	1	0	Planctomycete	extracellular
TraB	PF01963.12	gi|449067735|ref|YP_007434817.1|	-	0.078	12.4	0.0	0.16	11.3	0.0	1.5	2	0	0	2	2	2	0	TraB	family
Peptidase_M20	PF01546.23	gi|449067736|ref|YP_007434818.1|	-	2e-28	99.1	0.0	2.6e-28	98.8	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|449067736|ref|YP_007434818.1|	-	2.4e-19	69.1	0.0	4.4e-19	68.2	0.0	1.5	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Coagulase	PF08764.5	gi|449067736|ref|YP_007434818.1|	-	0.0052	16.7	0.3	0.0096	15.8	0.2	1.4	1	0	0	1	1	1	1	Staphylococcus	aureus	coagulase
ATP-cone	PF03477.11	gi|449067736|ref|YP_007434818.1|	-	0.043	14.2	0.4	6.4	7.2	0.0	2.5	2	0	0	2	2	2	0	ATP	cone	domain
DUF35_N	PF12172.3	gi|449067737|ref|YP_007434819.1|	-	5.5e-08	32.4	0.1	8.1e-08	31.9	0.1	1.2	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF35	PF01796.12	gi|449067737|ref|YP_007434819.1|	-	0.00019	21.6	0.1	0.00073	19.7	0.0	1.9	1	1	0	1	1	1	1	DUF35	OB-fold	domain
FdhE	PF04216.7	gi|449067737|ref|YP_007434819.1|	-	0.043	13.5	0.1	0.053	13.2	0.1	1.1	1	0	0	1	1	1	0	Protein	involved	in	formate	dehydrogenase	formation
zinc_ribbon_5	PF13719.1	gi|449067737|ref|YP_007434819.1|	-	0.054	13.0	2.0	0.13	11.8	0.0	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
HypA	PF01155.14	gi|449067737|ref|YP_007434819.1|	-	0.14	11.8	0.2	0.19	11.4	0.1	1.2	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zinc_ribbon_4	PF13717.1	gi|449067737|ref|YP_007434819.1|	-	0.31	10.7	0.2	0.31	10.7	0.2	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|449067737|ref|YP_007434819.1|	-	2	7.9	4.9	4.4	6.9	0.3	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|449067737|ref|YP_007434819.1|	-	2.5	7.4	5.1	5.3	6.3	3.6	1.5	1	1	0	1	1	1	0	zinc-ribbon	domain
zf-H2C2_2	PF13465.1	gi|449067737|ref|YP_007434819.1|	-	3.7	8.0	5.3	0.54	10.6	0.6	1.9	2	0	0	2	2	2	0	Zinc-finger	double	domain
Thiolase_C	PF02803.13	gi|449067738|ref|YP_007434820.1|	-	5e-05	22.7	0.1	0.00091	18.6	0.0	2.3	2	0	0	2	2	2	1	Thiolase,	C-terminal	domain
ACP_syn_III	PF08545.5	gi|449067738|ref|YP_007434820.1|	-	0.11	12.2	0.0	0.31	10.7	0.0	1.8	2	0	0	2	2	2	0	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
SBP_bac_5	PF00496.17	gi|449067739|ref|YP_007434821.1|	-	1.5e-23	83.2	15.5	9.3e-14	51.0	2.7	2.2	2	0	0	2	2	2	2	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
DAP10	PF07213.6	gi|449067739|ref|YP_007434821.1|	-	0.11	12.3	0.8	0.22	11.2	0.6	1.5	1	0	0	1	1	1	0	DAP10	membrane	protein
Shisa	PF13908.1	gi|449067739|ref|YP_007434821.1|	-	1.5	8.9	3.1	3.4	7.8	2.1	1.5	1	0	0	1	1	1	0	Wnt	and	FGF	inhibitory	regulator
BPD_transp_1	PF00528.17	gi|449067741|ref|YP_007434823.1|	-	3.4e-31	108.1	19.3	3.4e-31	108.1	13.4	2.0	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.17	gi|449067742|ref|YP_007434824.1|	-	1.9e-19	69.8	16.6	1.9e-19	69.8	11.5	2.2	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.2	gi|449067742|ref|YP_007434824.1|	-	0.00013	21.2	9.2	0.00013	21.2	6.4	3.7	4	1	0	4	4	4	1	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
ABC_tran	PF00005.22	gi|449067743|ref|YP_007434825.1|	-	5.1e-25	88.3	0.0	7.5e-25	87.8	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|449067743|ref|YP_007434825.1|	-	7.7e-24	83.8	0.1	1.3e-23	83.0	0.1	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|449067743|ref|YP_007434825.1|	-	1.3e-05	25.3	0.0	0.0013	18.7	0.0	2.1	1	1	1	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|449067743|ref|YP_007434825.1|	-	1.6e-05	25.0	0.0	5.7e-05	23.2	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|449067743|ref|YP_007434825.1|	-	6.3e-05	22.3	1.2	0.0019	17.4	0.8	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
PRK	PF00485.13	gi|449067743|ref|YP_007434825.1|	-	0.00014	21.5	0.0	0.00025	20.6	0.0	1.4	1	0	0	1	1	1	1	Phosphoribulokinase	/	Uridine	kinase	family
AAA_16	PF13191.1	gi|449067743|ref|YP_007434825.1|	-	0.0011	19.0	0.1	0.002	18.1	0.1	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_5	PF07728.9	gi|449067743|ref|YP_007434825.1|	-	0.0027	17.4	0.0	0.0059	16.3	0.0	1.7	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
DUF258	PF03193.11	gi|449067743|ref|YP_007434825.1|	-	0.0068	15.6	0.0	0.013	14.7	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_29	PF13555.1	gi|449067743|ref|YP_007434825.1|	-	0.0072	15.8	0.0	0.015	14.8	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
ArgK	PF03308.11	gi|449067743|ref|YP_007434825.1|	-	0.011	14.5	0.1	0.018	13.7	0.0	1.3	1	0	0	1	1	1	0	ArgK	protein
Rad17	PF03215.10	gi|449067743|ref|YP_007434825.1|	-	0.015	14.0	0.0	0.022	13.4	0.0	1.2	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
RNA_helicase	PF00910.17	gi|449067743|ref|YP_007434825.1|	-	0.02	15.0	0.1	0.058	13.5	0.0	1.9	2	1	0	2	2	2	0	RNA	helicase
NTPase_1	PF03266.10	gi|449067743|ref|YP_007434825.1|	-	0.031	14.0	0.9	0.13	11.9	0.1	2.2	2	0	0	2	2	2	0	NTPase
NB-ARC	PF00931.17	gi|449067743|ref|YP_007434825.1|	-	0.037	12.8	0.0	0.056	12.2	0.0	1.4	1	0	0	1	1	1	0	NB-ARC	domain
AAA_10	PF12846.2	gi|449067743|ref|YP_007434825.1|	-	0.067	12.6	0.4	0.76	9.1	0.0	2.1	1	1	0	2	2	2	0	AAA-like	domain
DUF87	PF01935.12	gi|449067743|ref|YP_007434825.1|	-	0.076	12.8	0.2	0.44	10.3	0.1	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF87
AAA_25	PF13481.1	gi|449067743|ref|YP_007434825.1|	-	0.078	12.3	0.5	0.43	9.9	0.1	2.2	1	1	2	3	3	3	0	AAA	domain
Septin	PF00735.13	gi|449067743|ref|YP_007434825.1|	-	0.11	11.5	0.0	0.18	10.8	0.0	1.3	1	0	0	1	1	1	0	Septin
MMR_HSR1	PF01926.18	gi|449067743|ref|YP_007434825.1|	-	0.14	12.1	0.1	0.29	11.1	0.0	1.8	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
ABC_tran	PF00005.22	gi|449067744|ref|YP_007434826.1|	-	2.3e-29	102.4	0.0	5.5e-29	101.2	0.0	1.6	2	0	0	2	2	2	1	ABC	transporter
oligo_HPY	PF08352.7	gi|449067744|ref|YP_007434826.1|	-	2.3e-18	66.2	0.1	3.7e-18	65.6	0.1	1.3	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|449067744|ref|YP_007434826.1|	-	2.3e-08	34.3	0.5	0.0013	18.8	0.0	2.1	1	1	1	2	2	2	2	AAA	domain
AAA_22	PF13401.1	gi|449067744|ref|YP_007434826.1|	-	0.0015	18.6	0.4	0.0043	17.1	0.3	1.8	1	1	0	1	1	1	1	AAA	domain
NB-ARC	PF00931.17	gi|449067744|ref|YP_007434826.1|	-	0.0016	17.3	0.1	0.0026	16.6	0.1	1.3	1	0	0	1	1	1	1	NB-ARC	domain
SMC_N	PF02463.14	gi|449067744|ref|YP_007434826.1|	-	0.0027	16.9	0.1	0.0048	16.1	0.0	1.4	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|449067744|ref|YP_007434826.1|	-	0.0035	16.8	0.1	0.0084	15.6	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_18	PF13238.1	gi|449067744|ref|YP_007434826.1|	-	0.0051	17.1	0.4	0.023	14.9	0.2	2.0	1	1	1	2	2	2	1	AAA	domain
MobB	PF03205.9	gi|449067744|ref|YP_007434826.1|	-	0.0093	15.6	0.4	0.022	14.4	0.2	1.7	1	1	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_16	PF13191.1	gi|449067744|ref|YP_007434826.1|	-	0.025	14.5	0.2	0.039	13.9	0.1	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
PRK	PF00485.13	gi|449067744|ref|YP_007434826.1|	-	0.033	13.7	0.0	0.052	13.0	0.0	1.3	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
DUF258	PF03193.11	gi|449067744|ref|YP_007434826.1|	-	0.073	12.2	0.1	0.11	11.6	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
UPF0079	PF02367.12	gi|449067744|ref|YP_007434826.1|	-	0.086	12.4	0.1	0.2	11.2	0.1	1.6	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_13	PF13166.1	gi|449067744|ref|YP_007434826.1|	-	0.15	10.5	0.0	8.1	4.7	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
zf-CCCH_2	PF14608.1	gi|449067744|ref|YP_007434826.1|	-	0.55	10.3	3.1	1.3	9.1	2.1	1.6	1	0	0	1	1	1	0	Zinc	finger	C-x8-C-x5-C-x3-H	type
UbiA	PF01040.13	gi|449067745|ref|YP_007434827.1|	-	0.0012	18.1	2.1	0.0014	17.8	1.4	1.1	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
DUF1673	PF07895.6	gi|449067745|ref|YP_007434827.1|	-	0.0028	17.2	3.1	0.0034	16.9	2.2	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1673)
FA_desaturase	PF00487.19	gi|449067745|ref|YP_007434827.1|	-	0.039	13.4	4.2	0.058	12.8	2.9	1.3	1	1	0	1	1	1	0	Fatty	acid	desaturase
TerC	PF03741.11	gi|449067745|ref|YP_007434827.1|	-	0.17	11.3	2.7	0.49	9.7	1.9	1.7	1	1	0	1	1	1	0	Integral	membrane	protein	TerC	family
MMPL	PF03176.10	gi|449067745|ref|YP_007434827.1|	-	0.92	8.1	2.9	0.52	8.9	0.1	1.7	2	0	0	2	2	2	0	MMPL	family
DUF454	PF04304.8	gi|449067745|ref|YP_007434827.1|	-	1.4	8.9	6.7	1.9	8.5	0.8	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF454)
DUF3270	PF11674.3	gi|449067745|ref|YP_007434827.1|	-	9.1	6.3	7.1	32	4.6	1.7	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3270)
FAA_hydrolase	PF01557.13	gi|449067746|ref|YP_007434828.1|	-	8.5e-68	228.0	0.0	1.1e-67	227.7	0.0	1.1	1	0	0	1	1	1	1	Fumarylacetoacetate	(FAA)	hydrolase	family
Methyltransf_31	PF13847.1	gi|449067747|ref|YP_007434829.1|	-	4.7e-19	68.4	0.0	5.2e-19	68.3	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|449067747|ref|YP_007434829.1|	-	4.7e-17	62.2	0.0	6e-17	61.9	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|449067747|ref|YP_007434829.1|	-	2.2e-10	40.5	0.0	2.6e-10	40.2	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|449067747|ref|YP_007434829.1|	-	6.5e-10	38.5	0.0	8.9e-10	38.0	0.0	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_18	PF12847.2	gi|449067747|ref|YP_007434829.1|	-	1.9e-09	38.0	0.0	2.8e-09	37.5	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|449067747|ref|YP_007434829.1|	-	6.6e-09	36.1	0.0	8.8e-09	35.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|449067747|ref|YP_007434829.1|	-	1.4e-08	34.7	0.0	2.5e-08	33.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|449067747|ref|YP_007434829.1|	-	6.8e-07	29.5	0.0	9.6e-07	29.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|449067747|ref|YP_007434829.1|	-	1.1e-06	28.3	0.0	1.5e-06	27.9	0.0	1.3	1	1	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
MTS	PF05175.9	gi|449067747|ref|YP_007434829.1|	-	1.5e-06	27.6	0.0	2.3e-06	27.1	0.0	1.3	1	1	0	1	1	1	1	Methyltransferase	small	domain
PrmA	PF06325.8	gi|449067747|ref|YP_007434829.1|	-	1.9e-05	23.9	0.0	2.5e-05	23.5	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
FtsJ	PF01728.14	gi|449067747|ref|YP_007434829.1|	-	0.00039	20.4	0.0	0.00064	19.7	0.0	1.5	1	1	0	1	1	1	1	FtsJ-like	methyltransferase
MetW	PF07021.7	gi|449067747|ref|YP_007434829.1|	-	0.00064	19.1	0.0	0.00086	18.7	0.0	1.1	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
Methyltransf_32	PF13679.1	gi|449067747|ref|YP_007434829.1|	-	0.0011	18.6	0.0	0.0013	18.3	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
GCD14	PF08704.5	gi|449067747|ref|YP_007434829.1|	-	0.0012	18.3	0.0	0.0018	17.8	0.0	1.2	1	0	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
TehB	PF03848.9	gi|449067747|ref|YP_007434829.1|	-	0.0013	17.9	0.0	0.0017	17.5	0.0	1.1	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
RrnaAD	PF00398.15	gi|449067747|ref|YP_007434829.1|	-	0.0017	17.4	0.0	0.0023	17.0	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Met_10	PF02475.11	gi|449067747|ref|YP_007434829.1|	-	0.0018	17.8	0.0	0.0023	17.5	0.0	1.1	1	0	0	1	1	1	1	Met-10+	like-protein
Nol1_Nop2_Fmu	PF01189.12	gi|449067747|ref|YP_007434829.1|	-	0.013	14.9	0.0	0.015	14.6	0.0	1.2	1	0	0	1	1	1	0	NOL1/NOP2/sun	family
Methyltransf_29	PF03141.11	gi|449067747|ref|YP_007434829.1|	-	0.025	12.9	0.0	0.03	12.6	0.0	1.0	1	0	0	1	1	1	0	Putative	S-adenosyl-L-methionine-dependent	methyltransferase
Methyltransf_4	PF02390.12	gi|449067747|ref|YP_007434829.1|	-	0.026	13.5	0.0	0.47	9.4	0.0	2.1	2	0	0	2	2	2	0	Putative	methyltransferase
Methyltransf_8	PF05148.10	gi|449067747|ref|YP_007434829.1|	-	0.028	14.0	0.0	0.16	11.6	0.0	1.9	1	1	0	1	1	1	0	Hypothetical	methyltransferase
CMAS	PF02353.15	gi|449067747|ref|YP_007434829.1|	-	0.039	13.0	0.0	0.045	12.8	0.0	1.1	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
N6_N4_Mtase	PF01555.13	gi|449067747|ref|YP_007434829.1|	-	0.076	12.4	0.0	0.18	11.2	0.0	1.5	2	0	0	2	2	2	0	DNA	methylase
Phosphoesterase	PF04185.9	gi|449067748|ref|YP_007434830.1|	-	2.3e-70	237.6	3.2	5.1e-70	236.5	2.2	1.6	1	1	0	1	1	1	1	Phosphoesterase	family
MFMR	PF07777.6	gi|449067748|ref|YP_007434830.1|	-	0.39	10.6	1.8	0.86	9.5	1.3	1.5	1	0	0	1	1	1	0	G-box	binding	protein	MFMR
PaaA_PaaC	PF05138.7	gi|449067749|ref|YP_007434831.1|	-	8.9e-27	93.6	0.0	9.2e-27	93.6	0.0	1.0	1	0	0	1	1	1	1	Phenylacetic	acid	catabolic	protein
MiaE_2	PF13794.1	gi|449067749|ref|YP_007434831.1|	-	0.035	13.5	0.0	0.068	12.6	0.0	1.5	1	1	0	1	1	1	0	tRNA-(MS[2]IO[6]A)-hydroxylase	(MiaE)-like
AurF	PF11583.3	gi|449067749|ref|YP_007434831.1|	-	0.053	12.4	0.0	0.13	11.1	0.0	1.6	1	1	1	2	2	2	0	P-aminobenzoate	N-oxygenase	AurF
PaaA_PaaC	PF05138.7	gi|449067750|ref|YP_007434832.1|	-	3.8e-45	153.9	0.0	4.8e-45	153.5	0.0	1.0	1	0	0	1	1	1	1	Phenylacetic	acid	catabolic	protein
ECH	PF00378.15	gi|449067751|ref|YP_007434833.1|	-	2.8e-56	190.3	0.0	3.2e-56	190.2	0.0	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
AAA_14	PF13173.1	gi|449067752|ref|YP_007434834.1|	-	7.2e-22	77.6	0.4	2.4e-21	75.9	0.0	2.1	2	1	1	3	3	3	1	AAA	domain
DUF4143	PF13635.1	gi|449067752|ref|YP_007434834.1|	-	9.9e-09	35.2	0.0	1.3e-08	34.8	0.0	1.4	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
Arch_ATPase	PF01637.13	gi|449067752|ref|YP_007434834.1|	-	0.0018	18.0	0.1	0.013	15.1	0.0	2.2	2	0	0	2	2	2	1	Archaeal	ATPase
FtsK_SpoIIIE	PF01580.13	gi|449067752|ref|YP_007434834.1|	-	0.015	14.7	0.0	0.024	14.1	0.0	1.3	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
DNA_pol3_delta2	PF13177.1	gi|449067752|ref|YP_007434834.1|	-	0.04	13.5	0.0	0.063	12.9	0.0	1.5	1	0	0	1	1	1	0	DNA	polymerase	III,	delta	subunit
NACHT	PF05729.7	gi|449067752|ref|YP_007434834.1|	-	0.047	13.3	0.0	0.082	12.5	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
AAA_16	PF13191.1	gi|449067752|ref|YP_007434834.1|	-	0.071	13.0	0.0	0.13	12.2	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
DsrD	PF08679.6	gi|449067752|ref|YP_007434834.1|	-	0.082	12.9	0.5	10	6.2	0.2	2.8	2	0	0	2	2	2	0	Dissimilatory	sulfite	reductase	D	(DsrD)
AAA	PF00004.24	gi|449067752|ref|YP_007434834.1|	-	0.092	12.9	0.0	0.2	11.8	0.0	1.6	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AMP-binding	PF00501.23	gi|449067753|ref|YP_007434835.1|	-	8.2e-83	278.1	0.0	1e-82	277.7	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|449067753|ref|YP_007434835.1|	-	6.3e-21	75.0	0.6	1.3e-20	74.0	0.4	1.6	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
PaaX_C	PF08223.6	gi|449067754|ref|YP_007434836.1|	-	1.4e-52	177.9	0.0	1.9e-52	177.4	0.0	1.2	1	0	0	1	1	1	1	PaaX-like	protein	C-terminal	domain
PaaX	PF07848.7	gi|449067754|ref|YP_007434836.1|	-	3.9e-16	58.8	0.1	6.3e-16	58.1	0.0	1.3	1	0	0	1	1	1	1	PaaX-like	protein
LexA_DNA_bind	PF01726.11	gi|449067754|ref|YP_007434836.1|	-	0.0057	16.2	0.0	0.023	14.2	0.0	1.9	2	0	0	2	2	2	1	LexA	DNA	binding	domain
GntR	PF00392.16	gi|449067754|ref|YP_007434836.1|	-	0.11	11.9	0.0	0.58	9.6	0.0	2.1	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
YjgP_YjgQ	PF03739.9	gi|449067755|ref|YP_007434837.1|	-	0.0052	15.5	9.5	0.0052	15.5	6.6	1.4	1	1	0	1	1	1	1	Predicted	permease	YjgP/YjgQ	family
Penicil_amidase	PF01804.13	gi|449067756|ref|YP_007434838.1|	-	4.4e-180	601.3	2.0	4.9e-180	601.1	1.4	1.0	1	0	0	1	1	1	1	Penicillin	amidase
Acyl-CoA_dh_1	PF00441.19	gi|449067757|ref|YP_007434839.1|	-	1.4e-36	125.8	0.0	2.9e-36	124.8	0.0	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|449067757|ref|YP_007434839.1|	-	1.8e-10	40.1	0.2	3.1e-10	39.3	0.1	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.6	gi|449067757|ref|YP_007434839.1|	-	4.6e-08	33.3	0.0	8.4e-08	32.5	0.0	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
AMP-binding	PF00501.23	gi|449067758|ref|YP_007434840.1|	-	2e-78	263.6	0.0	2.5e-78	263.3	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|449067758|ref|YP_007434840.1|	-	3.2e-14	53.6	0.0	6.4e-14	52.6	0.0	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
Peptidase_C15	PF01470.12	gi|449067759|ref|YP_007434841.1|	-	3.7e-54	183.6	0.0	4e-54	183.5	0.0	1.0	1	0	0	1	1	1	1	Pyroglutamyl	peptidase
Amidohydro_1	PF01979.15	gi|449067760|ref|YP_007434842.1|	-	3.3e-42	145.3	0.0	3.9e-42	145.0	0.0	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|449067760|ref|YP_007434842.1|	-	2.6e-14	53.9	0.0	2.4e-06	27.7	0.0	2.6	1	1	0	2	2	2	2	Amidohydrolase
Amidohydro_5	PF13594.1	gi|449067760|ref|YP_007434842.1|	-	2.3e-10	40.1	0.1	7.1e-10	38.5	0.1	1.9	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|449067760|ref|YP_007434842.1|	-	8.4e-07	28.5	0.7	0.0045	16.2	0.0	2.8	2	2	0	2	2	2	2	Amidohydrolase	family
Sugar_tr	PF00083.19	gi|449067761|ref|YP_007434843.1|	-	3.4e-39	134.6	29.1	5.4e-39	134.0	20.2	1.2	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|449067761|ref|YP_007434843.1|	-	8.9e-27	93.7	65.7	2.9e-22	78.8	33.5	3.5	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
DUF1228	PF06779.9	gi|449067761|ref|YP_007434843.1|	-	0.23	11.5	0.1	0.23	11.5	0.1	3.4	3	1	1	4	4	4	0	Protein	of	unknown	function	(DUF1228)
OATP	PF03137.15	gi|449067761|ref|YP_007434843.1|	-	3.3	5.6	11.6	0.6	8.0	0.8	2.8	2	1	1	3	3	3	0	Organic	Anion	Transporter	Polypeptide	(OATP)	family
ABC2_membrane_2	PF12679.2	gi|449067762|ref|YP_007434844.1|	-	6.5e-27	94.0	1.3	2.2e-26	92.3	0.9	1.8	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_5	PF13346.1	gi|449067762|ref|YP_007434844.1|	-	7e-08	31.9	24.1	7e-08	31.9	16.7	3.1	3	0	0	3	3	3	1	ABC-2	family	transporter	protein
CarboxypepD_reg	PF13620.1	gi|449067762|ref|YP_007434844.1|	-	6.8e-07	29.2	4.1	6.8e-07	29.2	2.8	2.7	2	1	0	2	2	2	1	Carboxypeptidase	regulatory-like	domain
DUF4480	PF13715.1	gi|449067762|ref|YP_007434844.1|	-	0.00021	21.2	1.2	0.00068	19.6	0.8	1.9	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4480)
ABC2_membrane_4	PF12730.2	gi|449067762|ref|YP_007434844.1|	-	0.071	12.2	59.5	4.2	6.4	41.3	2.8	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
ABC2_membrane_3	PF12698.2	gi|449067762|ref|YP_007434844.1|	-	0.11	11.4	49.3	1.1	8.1	33.9	2.2	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
DUF2636	PF11120.3	gi|449067762|ref|YP_007434844.1|	-	6.1	6.4	6.5	2.5	7.6	0.1	3.3	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2636)
B12-binding	PF02310.14	gi|449067763|ref|YP_007434845.1|	-	6.9e-20	71.1	0.0	7.7e-19	67.7	0.0	2.2	2	1	0	2	2	2	1	B12	binding	domain
Radical_SAM	PF04055.16	gi|449067763|ref|YP_007434845.1|	-	5.8e-18	65.6	0.0	1.5e-17	64.3	0.0	1.7	1	0	0	1	1	1	1	Radical	SAM	superfamily
PGG	PF13962.1	gi|449067764|ref|YP_007434846.1|	-	0.016	14.8	1.6	0.016	14.8	1.1	1.7	2	0	0	2	2	2	0	Domain	of	unknown	function
DUF4401	PF14351.1	gi|449067764|ref|YP_007434846.1|	-	0.03	13.3	10.3	0.036	13.0	7.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4401)
7TM-7TMR_HD	PF07698.6	gi|449067764|ref|YP_007434846.1|	-	0.05	13.0	8.3	0.064	12.6	5.8	1.2	1	0	0	1	1	1	0	7TM	receptor	with	intracellular	HD	hydrolase
DUF4064	PF13273.1	gi|449067764|ref|YP_007434846.1|	-	0.051	13.6	1.2	0.051	13.6	0.8	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4064)
DUF1628	PF07790.6	gi|449067764|ref|YP_007434846.1|	-	1	10.1	3.5	1.6	9.5	1.8	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1628)
DUF2678	PF10856.3	gi|449067764|ref|YP_007434846.1|	-	1.3	8.7	7.7	0.29	10.8	2.8	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2678)
DUF131	PF01998.12	gi|449067764|ref|YP_007434846.1|	-	1.9	7.9	8.2	12	5.2	0.0	2.8	3	0	0	3	3	3	0	Protein	of	unknown	function	DUF131
Claudin_3	PF06653.6	gi|449067764|ref|YP_007434846.1|	-	8.7	6.0	12.3	0.17	11.5	2.4	1.9	1	1	1	2	2	2	0	Tight	junction	protein,	Claudin-like
HTH_5	PF01022.15	gi|449067765|ref|YP_007434847.1|	-	2.1e-11	43.2	0.2	3.7e-11	42.5	0.1	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.1	gi|449067765|ref|YP_007434847.1|	-	0.00024	20.4	0.4	0.00024	20.4	0.3	1.8	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.14	gi|449067765|ref|YP_007434847.1|	-	0.00061	19.4	0.2	0.0013	18.3	0.0	1.6	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_11	PF08279.7	gi|449067765|ref|YP_007434847.1|	-	0.00072	19.1	0.2	0.0016	18.0	0.0	1.7	2	0	0	2	2	2	1	HTH	domain
HTH_20	PF12840.2	gi|449067765|ref|YP_007434847.1|	-	0.002	17.9	0.0	0.0034	17.1	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_28	PF13518.1	gi|449067765|ref|YP_007434847.1|	-	0.0023	17.8	0.0	0.0041	17.1	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_40	PF14493.1	gi|449067765|ref|YP_007434847.1|	-	0.0038	17.4	0.6	0.0051	16.9	0.1	1.5	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_45	PF14947.1	gi|449067765|ref|YP_007434847.1|	-	0.0044	16.8	0.5	0.0085	15.8	0.3	1.5	1	1	0	1	1	1	1	Winged	helix-turn-helix
GerE	PF00196.14	gi|449067765|ref|YP_007434847.1|	-	0.0054	16.0	0.1	0.0093	15.2	0.1	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	luxR	family
MotA_activ	PF09114.5	gi|449067765|ref|YP_007434847.1|	-	0.028	14.1	0.1	0.029	14.1	0.1	1.2	1	0	0	1	1	1	0	Transcription	factor	MotA,	activation	domain
HTH_23	PF13384.1	gi|449067765|ref|YP_007434847.1|	-	0.063	12.9	0.0	0.13	11.9	0.0	1.5	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_9	PF08221.6	gi|449067765|ref|YP_007434847.1|	-	0.071	12.9	0.5	0.24	11.3	0.1	1.9	1	1	0	2	2	2	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
HTH_34	PF13601.1	gi|449067765|ref|YP_007434847.1|	-	0.11	12.5	0.1	0.15	12.0	0.1	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
DUF4363	PF14276.1	gi|449067766|ref|YP_007434848.1|	-	0.075	12.7	1.7	0.16	11.6	1.2	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4363)
PIN	PF01850.16	gi|449067768|ref|YP_007434850.1|	-	2.9e-10	40.5	0.2	3.3e-10	40.3	0.2	1.0	1	0	0	1	1	1	1	PIN	domain
TCTP	PF00838.12	gi|449067769|ref|YP_007434851.1|	-	0.019	14.9	0.9	0.021	14.8	0.7	1.0	1	0	0	1	1	1	0	Translationally	controlled	tumour	protein
MRL1	PF13003.2	gi|449067769|ref|YP_007434851.1|	-	0.044	13.6	2.0	0.051	13.3	1.4	1.2	1	0	0	1	1	1	0	Ribosomal	protein	L1
RHH_1	PF01402.16	gi|449067769|ref|YP_007434851.1|	-	0.19	11.7	0.3	0.19	11.7	0.2	2.6	3	0	0	3	3	3	0	Ribbon-helix-helix	protein,	copG	family
adh_short	PF00106.20	gi|449067770|ref|YP_007434852.1|	-	6.5e-30	104.2	0.0	1e-29	103.6	0.0	1.3	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|449067770|ref|YP_007434852.1|	-	6.4e-24	85.0	0.0	1.2e-23	84.1	0.0	1.4	2	0	0	2	2	2	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|449067770|ref|YP_007434852.1|	-	1.5e-09	37.7	0.0	3.3e-09	36.6	0.0	1.5	2	0	0	2	2	2	1	KR	domain
DUF1776	PF08643.5	gi|449067770|ref|YP_007434852.1|	-	2.3e-07	30.2	0.0	4.4e-06	26.0	0.0	2.0	1	1	0	1	1	1	1	Fungal	family	of	unknown	function	(DUF1776)
Epimerase	PF01370.16	gi|449067770|ref|YP_007434852.1|	-	0.00021	20.7	0.1	0.0004	19.8	0.1	1.6	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
3HCDH_N	PF02737.13	gi|449067770|ref|YP_007434852.1|	-	0.091	12.4	0.0	0.28	10.8	0.0	1.8	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
HTH_45	PF14947.1	gi|449067771|ref|YP_007434853.1|	-	1.2e-18	66.7	3.4	1.3e-18	66.5	2.3	1.0	1	0	0	1	1	1	1	Winged	helix-turn-helix
DUF4364	PF14277.1	gi|449067771|ref|YP_007434853.1|	-	0.0022	17.6	0.7	0.0025	17.4	0.5	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
DUF3116	PF11313.3	gi|449067771|ref|YP_007434853.1|	-	0.027	14.0	1.9	1.2	8.8	1.3	2.1	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3116)
Ribosomal_S19e	PF01090.14	gi|449067771|ref|YP_007434853.1|	-	0.031	13.7	0.0	0.036	13.4	0.0	1.3	1	1	0	1	1	1	0	Ribosomal	protein	S19e
DUF4393	PF14337.1	gi|449067771|ref|YP_007434853.1|	-	0.091	12.1	0.2	0.092	12.1	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4393)
HemN_C	PF06969.11	gi|449067771|ref|YP_007434853.1|	-	0.11	12.6	0.0	0.14	12.2	0.0	1.3	1	0	0	1	1	1	0	HemN	C-terminal	domain
Peptidase_S24	PF00717.18	gi|449067773|ref|YP_007434855.1|	-	4.1e-05	23.1	0.6	0.00011	21.8	0.4	1.7	1	0	0	1	1	1	1	Peptidase	S24-like
HTH_45	PF14947.1	gi|449067776|ref|YP_007434858.1|	-	4.3e-19	68.0	0.2	6e-19	67.6	0.1	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_24	PF13412.1	gi|449067776|ref|YP_007434858.1|	-	0.01	15.2	0.4	0.02	14.2	0.0	1.7	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HalX	PF08663.5	gi|449067776|ref|YP_007434858.1|	-	0.036	14.0	0.0	0.051	13.5	0.0	1.2	1	0	0	1	1	1	0	HalX	domain
B-block_TFIIIC	PF04182.7	gi|449067776|ref|YP_007434858.1|	-	0.05	13.4	0.3	0.091	12.6	0.0	1.7	2	0	0	2	2	2	0	B-block	binding	subunit	of	TFIIIC
DUF2721	PF11026.3	gi|449067777|ref|YP_007434859.1|	-	0.0019	17.8	0.2	0.0025	17.4	0.1	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2721)
EzrA	PF06160.7	gi|449067777|ref|YP_007434859.1|	-	0.0068	14.6	0.2	0.01	14.0	0.2	1.2	1	0	0	1	1	1	1	Septation	ring	formation	regulator,	EzrA
Muted	PF14942.1	gi|449067777|ref|YP_007434859.1|	-	0.01	15.7	0.2	0.014	15.2	0.1	1.2	1	0	0	1	1	1	1	Organelle	biogenesis,	Muted-like	protein
DegS	PF05384.6	gi|449067777|ref|YP_007434859.1|	-	0.015	14.5	0.3	0.024	13.8	0.2	1.3	1	0	0	1	1	1	0	Sensor	protein	DegS
Myb_DNA-bind_5	PF13873.1	gi|449067777|ref|YP_007434859.1|	-	0.019	14.8	1.7	0.15	11.9	1.2	2.1	1	1	0	1	1	1	0	Myb/SANT-like	DNA-binding	domain
DUF2207	PF09972.4	gi|449067777|ref|YP_007434859.1|	-	0.036	12.6	2.4	0.04	12.5	1.7	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
Ded_cyto	PF06920.8	gi|449067777|ref|YP_007434859.1|	-	0.046	13.0	0.0	0.059	12.6	0.0	1.2	1	0	0	1	1	1	0	Dedicator	of	cytokinesis
WEMBL	PF05701.6	gi|449067777|ref|YP_007434859.1|	-	0.085	11.3	1.2	0.095	11.1	0.8	1.1	1	0	0	1	1	1	0	Weak	chloroplast	movement	under	blue	light
IclR	PF01614.13	gi|449067777|ref|YP_007434859.1|	-	0.095	12.3	0.1	0.14	11.8	0.1	1.3	1	0	0	1	1	1	0	Bacterial	transcriptional	regulator
LysE	PF01810.13	gi|449067778|ref|YP_007434860.1|	-	0.042	13.1	8.8	0.22	10.7	6.1	2.3	1	1	0	1	1	1	0	LysE	type	translocator
DUF2897	PF11446.3	gi|449067778|ref|YP_007434860.1|	-	1.1	9.1	0.0	1.1	9.1	0.0	2.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2897)
ABC_tran	PF00005.22	gi|449067779|ref|YP_007434861.1|	-	9.9e-29	100.3	0.0	1.8e-28	99.5	0.0	1.4	2	0	0	2	2	1	1	ABC	transporter
AAA_21	PF13304.1	gi|449067779|ref|YP_007434861.1|	-	1e-15	58.5	5.3	3.4e-09	37.0	0.0	2.8	2	1	0	3	3	3	2	AAA	domain
AAA_15	PF13175.1	gi|449067779|ref|YP_007434861.1|	-	1.6e-06	27.4	0.1	0.0012	17.9	0.3	2.2	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_29	PF13555.1	gi|449067779|ref|YP_007434861.1|	-	2.7e-05	23.6	0.4	6.9e-05	22.2	0.1	1.7	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
Rad17	PF03215.10	gi|449067779|ref|YP_007434861.1|	-	6.6e-05	21.7	0.0	9.3e-05	21.2	0.0	1.1	1	0	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
AAA_23	PF13476.1	gi|449067779|ref|YP_007434861.1|	-	0.00081	19.7	1.2	0.0013	19.1	0.8	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|449067779|ref|YP_007434861.1|	-	0.0029	17.7	0.3	0.012	15.7	0.2	2.1	1	1	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|449067779|ref|YP_007434861.1|	-	0.0036	16.5	0.1	0.0059	15.8	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
SMC_N	PF02463.14	gi|449067779|ref|YP_007434861.1|	-	0.0068	15.6	0.2	0.25	10.5	0.1	2.2	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
AAA_17	PF13207.1	gi|449067779|ref|YP_007434861.1|	-	0.011	16.4	0.3	0.06	14.1	0.0	2.2	2	1	0	2	2	2	0	AAA	domain
AAA_19	PF13245.1	gi|449067779|ref|YP_007434861.1|	-	0.016	14.9	0.0	0.05	13.3	0.0	1.8	2	0	0	2	2	2	0	Part	of	AAA	domain
AAA_28	PF13521.1	gi|449067779|ref|YP_007434861.1|	-	0.02	14.8	0.0	0.037	13.9	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.12	gi|449067779|ref|YP_007434861.1|	-	0.023	14.1	0.0	0.41	10.0	0.0	2.2	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA_16	PF13191.1	gi|449067779|ref|YP_007434861.1|	-	0.026	14.4	0.2	0.091	12.7	0.1	1.9	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_10	PF12846.2	gi|449067779|ref|YP_007434861.1|	-	0.03	13.7	0.4	2.1	7.6	0.1	2.4	2	1	0	2	2	2	0	AAA-like	domain
AAA	PF00004.24	gi|449067779|ref|YP_007434861.1|	-	0.046	13.9	0.1	0.12	12.5	0.1	1.9	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_18	PF13238.1	gi|449067779|ref|YP_007434861.1|	-	0.062	13.6	1.2	0.17	12.1	0.1	2.0	2	0	0	2	2	2	0	AAA	domain
MobB	PF03205.9	gi|449067779|ref|YP_007434861.1|	-	0.083	12.5	0.1	0.18	11.4	0.1	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_33	PF13671.1	gi|449067779|ref|YP_007434861.1|	-	0.11	12.3	0.0	0.26	11.1	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
AAA_24	PF13479.1	gi|449067779|ref|YP_007434861.1|	-	0.12	11.9	0.1	0.53	9.8	0.1	1.9	2	0	0	2	2	2	0	AAA	domain
Mg_chelatase	PF01078.16	gi|449067779|ref|YP_007434861.1|	-	0.16	11.1	0.1	0.25	10.4	0.0	1.2	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
SRP54	PF00448.17	gi|449067779|ref|YP_007434861.1|	-	0.17	11.3	0.1	0.29	10.5	0.1	1.4	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
ABC2_membrane	PF01061.19	gi|449067780|ref|YP_007434862.1|	-	9.6e-15	54.3	26.3	2e-14	53.2	18.2	1.5	1	1	0	1	1	1	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.2	gi|449067780|ref|YP_007434862.1|	-	8.9e-05	21.6	30.9	0.00015	20.9	21.4	1.4	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
DUF2636	PF11120.3	gi|449067780|ref|YP_007434862.1|	-	0.41	10.1	4.3	6.7	6.3	0.1	3.3	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF2636)
DUF1049	PF06305.6	gi|449067780|ref|YP_007434862.1|	-	3.1	7.3	5.7	25	4.4	1.8	2.8	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1049)
DUF520	PF04461.8	gi|449067781|ref|YP_007434863.1|	-	0.088	12.6	0.6	0.14	12.0	0.4	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF520)
Fer4_10	PF13237.1	gi|449067782|ref|YP_007434864.1|	-	1.9e-07	30.7	6.5	3e-07	30.1	4.5	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|449067782|ref|YP_007434864.1|	-	2.2e-05	24.6	15.7	0.00015	21.9	5.7	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|449067782|ref|YP_007434864.1|	-	5.4e-05	22.8	9.6	0.034	14.0	1.8	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|449067782|ref|YP_007434864.1|	-	6.9e-05	23.1	8.4	6.9e-05	23.1	5.8	2.0	2	1	1	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|449067782|ref|YP_007434864.1|	-	0.00011	22.1	5.0	0.00044	20.2	2.7	2.3	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|449067782|ref|YP_007434864.1|	-	0.00036	20.2	9.3	0.038	13.9	2.1	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_11	PF13247.1	gi|449067782|ref|YP_007434864.1|	-	0.00057	19.7	1.9	0.0013	18.5	1.3	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|449067782|ref|YP_007434864.1|	-	0.0011	18.4	12.0	0.054	13.1	0.4	3.0	2	1	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|449067782|ref|YP_007434864.1|	-	0.023	15.4	3.9	0.42	11.3	0.0	2.4	2	0	0	2	2	2	0	4Fe-4S	double	cluster	binding	domain
Fer4_17	PF13534.1	gi|449067782|ref|YP_007434864.1|	-	0.064	13.6	8.2	2.6	8.4	5.7	2.5	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|449067782|ref|YP_007434864.1|	-	0.078	13.4	8.3	0.56	10.6	0.1	2.9	3	0	0	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|449067782|ref|YP_007434864.1|	-	0.11	13.1	13.5	1.6	9.4	1.1	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|449067782|ref|YP_007434864.1|	-	0.14	12.0	7.4	0.54	10.1	5.2	1.9	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_20	PF14691.1	gi|449067782|ref|YP_007434864.1|	-	0.22	11.1	6.1	0.13	11.8	1.1	2.2	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
AIM24	PF01987.12	gi|449067783|ref|YP_007434865.1|	-	1.9e-53	181.1	4.7	2.1e-53	180.9	3.3	1.0	1	0	0	1	1	1	1	Mitochondrial	biogenesis	AIM24
DUF2173	PF09941.4	gi|449067784|ref|YP_007434866.1|	-	4.3e-43	145.6	0.9	4.8e-43	145.4	0.6	1.0	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2173)
MS_channel	PF00924.13	gi|449067785|ref|YP_007434867.1|	-	3.5e-24	85.3	3.1	3.5e-24	85.3	2.1	1.5	2	0	0	2	2	2	1	Mechanosensitive	ion	channel
Rhomboid	PF01694.17	gi|449067785|ref|YP_007434867.1|	-	0.2	11.6	10.4	0.28	11.1	7.2	1.2	1	0	0	1	1	1	0	Rhomboid	family
SUR7	PF06687.7	gi|449067785|ref|YP_007434867.1|	-	0.48	9.9	3.5	0.73	9.3	2.4	1.4	1	0	0	1	1	1	0	SUR7/PalI	family
DUF2975	PF11188.3	gi|449067785|ref|YP_007434867.1|	-	2.3	7.9	13.0	1.2	8.8	3.2	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2975)
DUF2842	PF11003.3	gi|449067785|ref|YP_007434867.1|	-	5.8	6.8	9.1	9.3	6.1	1.0	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2842)
Sugar_tr	PF00083.19	gi|449067786|ref|YP_007434868.1|	-	2.8e-22	78.9	19.6	4e-18	65.2	7.2	2.3	2	0	0	2	2	2	2	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|449067786|ref|YP_007434868.1|	-	2.7e-20	72.3	37.1	6e-12	44.9	13.6	2.4	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_2	PF13347.1	gi|449067786|ref|YP_007434868.1|	-	1.6e-09	36.6	20.1	3.5e-05	22.4	5.4	2.8	2	1	0	2	2	2	2	MFS/sugar	transport	protein
MFS_1_like	PF12832.2	gi|449067786|ref|YP_007434868.1|	-	0.00033	20.3	4.8	0.0047	16.6	0.8	2.8	2	0	0	2	2	2	2	MFS_1	like	family
Lactamase_B	PF00753.22	gi|449067787|ref|YP_007434869.1|	-	4.9e-25	88.3	0.2	6.1e-25	87.9	0.1	1.1	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|449067787|ref|YP_007434869.1|	-	0.00016	21.2	0.0	0.00045	19.8	0.0	1.7	2	0	0	2	2	2	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|449067787|ref|YP_007434869.1|	-	0.013	15.1	0.0	0.033	13.9	0.0	1.7	2	0	0	2	2	2	0	Beta-lactamase	superfamily	domain
CbiQ	PF02361.11	gi|449067789|ref|YP_007434871.1|	-	3.5e-22	79.0	11.4	3.5e-22	79.0	7.9	1.9	3	0	0	3	3	3	1	Cobalt	transport	protein
Adipogenin	PF15202.1	gi|449067789|ref|YP_007434871.1|	-	2.5	8.0	6.5	0.67	9.8	0.1	2.8	1	1	1	2	2	2	0	Adipogenin
ABC_tran	PF00005.22	gi|449067790|ref|YP_007434872.1|	-	4.1e-48	163.1	0.0	7.7e-23	81.3	0.0	2.2	2	0	0	2	2	2	2	ABC	transporter
AAA_21	PF13304.1	gi|449067790|ref|YP_007434872.1|	-	1.1e-24	87.8	0.4	1.9e-08	34.6	0.0	4.2	3	1	1	4	4	4	4	AAA	domain
AAA_23	PF13476.1	gi|449067790|ref|YP_007434872.1|	-	1.2e-11	45.3	0.0	3.2e-06	27.6	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|449067790|ref|YP_007434872.1|	-	3.6e-11	42.7	2.8	5.3e-05	22.5	0.2	3.8	2	2	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|449067790|ref|YP_007434872.1|	-	1.2e-10	41.0	0.2	0.0057	15.7	0.4	4.2	4	0	0	4	4	4	2	AAA	ATPase	domain
AAA_29	PF13555.1	gi|449067790|ref|YP_007434872.1|	-	1.7e-10	40.2	0.6	3.7e-05	23.1	0.0	2.5	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.1	gi|449067790|ref|YP_007434872.1|	-	1.7e-07	31.3	0.0	0.0006	19.8	0.0	2.3	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_25	PF13481.1	gi|449067790|ref|YP_007434872.1|	-	4.1e-07	29.6	0.1	0.035	13.5	0.0	3.1	3	0	0	3	3	3	2	AAA	domain
AAA_17	PF13207.1	gi|449067790|ref|YP_007434872.1|	-	5.3e-07	30.4	0.8	0.034	14.9	0.0	2.9	2	0	0	2	2	2	2	AAA	domain
AAA_22	PF13401.1	gi|449067790|ref|YP_007434872.1|	-	1.5e-06	28.4	0.8	0.095	12.8	0.0	3.3	3	0	0	3	3	3	2	AAA	domain
DUF258	PF03193.11	gi|449067790|ref|YP_007434872.1|	-	3.1e-06	26.4	0.2	0.063	12.4	0.0	2.4	2	0	0	2	2	2	2	Protein	of	unknown	function,	DUF258
AAA_30	PF13604.1	gi|449067790|ref|YP_007434872.1|	-	5.1e-06	26.2	0.7	0.023	14.2	0.0	2.8	3	0	0	3	3	3	2	AAA	domain
NTPase_1	PF03266.10	gi|449067790|ref|YP_007434872.1|	-	1.4e-05	24.8	3.0	0.1	12.2	0.1	3.2	3	0	0	3	3	3	2	NTPase
NACHT	PF05729.7	gi|449067790|ref|YP_007434872.1|	-	2.5e-05	23.9	0.1	0.22	11.1	0.1	2.4	2	0	0	2	2	2	2	NACHT	domain
FtsK_SpoIIIE	PF01580.13	gi|449067790|ref|YP_007434872.1|	-	3.8e-05	23.2	0.1	0.27	10.6	0.0	2.4	2	0	0	2	2	2	2	FtsK/SpoIIIE	family
IstB_IS21	PF01695.12	gi|449067790|ref|YP_007434872.1|	-	4.5e-05	22.9	0.1	0.59	9.5	0.0	3.2	3	0	0	3	3	3	1	IstB-like	ATP	binding	protein
MobB	PF03205.9	gi|449067790|ref|YP_007434872.1|	-	5.4e-05	22.9	1.1	0.55	9.9	0.0	3.4	3	0	0	3	3	3	2	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_19	PF13245.1	gi|449067790|ref|YP_007434872.1|	-	6.5e-05	22.5	0.1	0.21	11.3	0.0	2.8	3	0	0	3	3	2	2	Part	of	AAA	domain
Mg_chelatase	PF01078.16	gi|449067790|ref|YP_007434872.1|	-	8.8e-05	21.7	0.2	0.009	15.1	0.0	2.4	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_18	PF13238.1	gi|449067790|ref|YP_007434872.1|	-	0.00011	22.5	7.0	0.5	10.6	0.2	4.3	3	1	0	3	3	3	2	AAA	domain
PduV-EutP	PF10662.4	gi|449067790|ref|YP_007434872.1|	-	0.00011	21.6	0.7	0.15	11.5	0.0	3.3	4	0	0	4	4	3	1	Ethanolamine	utilisation	-	propanediol	utilisation
SbcCD_C	PF13558.1	gi|449067790|ref|YP_007434872.1|	-	0.00024	20.9	0.1	0.049	13.5	0.0	3.3	2	1	0	2	2	2	1	Putative	exonuclease	SbcCD,	C	subunit
T2SE	PF00437.15	gi|449067790|ref|YP_007434872.1|	-	0.00034	19.5	3.3	0.2	10.5	0.1	2.9	3	0	0	3	3	3	2	Type	II/IV	secretion	system	protein
UPF0079	PF02367.12	gi|449067790|ref|YP_007434872.1|	-	0.00037	20.1	0.5	0.069	12.7	0.1	2.4	2	0	0	2	2	2	1	Uncharacterised	P-loop	hydrolase	UPF0079
MMR_HSR1	PF01926.18	gi|449067790|ref|YP_007434872.1|	-	0.00088	19.2	0.3	2.1	8.3	0.0	2.8	2	0	0	2	2	2	2	50S	ribosome-binding	GTPase
Miro	PF08477.8	gi|449067790|ref|YP_007434872.1|	-	0.00094	19.6	1.0	0.83	10.1	0.0	2.9	3	0	0	3	3	2	1	Miro-like	protein
KaiC	PF06745.8	gi|449067790|ref|YP_007434872.1|	-	0.0015	17.6	0.2	0.2	10.7	0.0	2.9	3	0	0	3	3	3	1	KaiC
AAA_10	PF12846.2	gi|449067790|ref|YP_007434872.1|	-	0.0026	17.2	3.6	0.22	10.9	0.2	2.7	3	1	0	3	3	2	1	AAA-like	domain
AAA	PF00004.24	gi|449067790|ref|YP_007434872.1|	-	0.003	17.7	0.4	0.28	11.3	0.0	2.9	3	0	0	3	3	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
ABC_ATPase	PF09818.4	gi|449067790|ref|YP_007434872.1|	-	0.0031	16.1	2.8	0.8	8.2	0.1	3.4	4	0	0	4	4	4	1	Predicted	ATPase	of	the	ABC	class
RNA_helicase	PF00910.17	gi|449067790|ref|YP_007434872.1|	-	0.0034	17.5	0.5	2.2	8.4	0.0	2.7	2	0	0	2	2	2	1	RNA	helicase
AAA_33	PF13671.1	gi|449067790|ref|YP_007434872.1|	-	0.004	17.0	0.3	1.8	8.4	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
DUF87	PF01935.12	gi|449067790|ref|YP_007434872.1|	-	0.01	15.6	1.3	1.1	9.0	0.1	2.9	3	0	0	3	3	2	0	Domain	of	unknown	function	DUF87
NB-ARC	PF00931.17	gi|449067790|ref|YP_007434872.1|	-	0.012	14.4	0.3	1.8	7.3	0.0	2.3	2	0	0	2	2	2	0	NB-ARC	domain
PRK	PF00485.13	gi|449067790|ref|YP_007434872.1|	-	0.015	14.8	0.1	5.7	6.4	0.1	2.5	2	0	0	2	2	2	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_24	PF13479.1	gi|449067790|ref|YP_007434872.1|	-	0.017	14.7	2.0	2.3	7.7	0.1	3.0	3	0	0	3	3	3	0	AAA	domain
ATP-synt_ab	PF00006.20	gi|449067790|ref|YP_007434872.1|	-	0.02	14.3	0.0	2.2	7.7	0.0	2.4	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
SRP54	PF00448.17	gi|449067790|ref|YP_007434872.1|	-	0.027	13.8	1.1	0.21	11.0	0.2	2.3	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
ATP_bind_1	PF03029.12	gi|449067790|ref|YP_007434872.1|	-	0.032	13.7	4.0	3.6	7.0	0.1	3.0	3	0	0	3	3	3	0	Conserved	hypothetical	ATP	binding	protein
Herpes_Helicase	PF02689.9	gi|449067790|ref|YP_007434872.1|	-	0.038	11.7	0.7	1.8	6.2	0.2	2.1	2	0	0	2	2	2	0	Helicase
Zeta_toxin	PF06414.7	gi|449067790|ref|YP_007434872.1|	-	0.041	12.9	1.0	5.8	5.9	0.1	2.6	3	0	0	3	3	2	0	Zeta	toxin
DEAD	PF00270.24	gi|449067790|ref|YP_007434872.1|	-	0.052	13.0	0.4	6.3	6.2	0.0	2.9	2	2	0	2	2	2	0	DEAD/DEAH	box	helicase
DUF815	PF05673.8	gi|449067790|ref|YP_007434872.1|	-	0.056	12.3	0.1	1.1	8.1	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF815)
ATP_bind_2	PF03668.10	gi|449067790|ref|YP_007434872.1|	-	0.059	12.4	1.9	4.1	6.4	0.1	2.4	2	0	0	2	2	2	0	P-loop	ATPase	protein	family
AAA_14	PF13173.1	gi|449067790|ref|YP_007434872.1|	-	0.069	13.0	0.7	20	5.1	0.1	3.1	3	0	0	3	3	2	0	AAA	domain
AAA_5	PF07728.9	gi|449067790|ref|YP_007434872.1|	-	0.079	12.6	1.0	6.3	6.5	0.0	3.0	2	1	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
cobW	PF02492.14	gi|449067790|ref|YP_007434872.1|	-	0.082	12.3	1.6	6.3	6.2	0.1	2.4	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
Sigma54_activat	PF00158.21	gi|449067790|ref|YP_007434872.1|	-	0.087	12.2	0.1	0.8	9.1	0.0	2.3	2	0	0	2	2	2	0	Sigma-54	interaction	domain
AAA_28	PF13521.1	gi|449067790|ref|YP_007434872.1|	-	0.088	12.7	4.6	0.85	9.5	0.1	2.5	2	0	0	2	2	2	0	AAA	domain
APS_kinase	PF01583.15	gi|449067790|ref|YP_007434872.1|	-	0.095	12.3	1.0	1.7	8.2	0.0	2.5	2	0	0	2	2	2	0	Adenylylsulphate	kinase
DUF2075	PF09848.4	gi|449067790|ref|YP_007434872.1|	-	0.18	10.7	0.7	13	4.6	0.2	2.2	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_13	PF13166.1	gi|449067790|ref|YP_007434872.1|	-	3.8	5.8	5.8	4.4	5.6	0.2	3.1	3	1	0	4	4	4	0	AAA	domain
Thymidylate_kin	PF02223.12	gi|449067790|ref|YP_007434872.1|	-	6.1	6.1	6.1	2.6	7.3	0.1	3.2	3	1	1	4	4	3	0	Thymidylate	kinase
Glycoprotein_B	PF00606.13	gi|449067791|ref|YP_007434873.1|	-	0.64	7.9	2.5	0.85	7.5	1.7	1.1	1	0	0	1	1	1	0	Herpesvirus	Glycoprotein	B
LEM	PF03020.10	gi|449067792|ref|YP_007434874.1|	-	0.0017	17.7	2.3	0.0036	16.7	0.0	2.5	2	2	1	3	3	3	1	LEM	domain
M	PF02370.11	gi|449067792|ref|YP_007434874.1|	-	0.0021	18.1	2.1	0.0021	18.1	1.5	2.2	3	0	0	3	3	2	1	M	protein	repeat
RHH_1	PF01402.16	gi|449067792|ref|YP_007434874.1|	-	0.035	14.0	3.4	0.66	9.9	0.0	2.6	2	1	0	2	2	2	0	Ribbon-helix-helix	protein,	copG	family
Vps53_N	PF04100.7	gi|449067792|ref|YP_007434874.1|	-	0.041	12.6	0.1	0.041	12.6	0.1	1.1	1	0	0	1	1	1	0	Vps53-like,	N-terminal
KorB	PF08535.5	gi|449067792|ref|YP_007434874.1|	-	0.052	13.7	0.2	0.088	12.9	0.1	1.4	1	1	0	1	1	1	0	KorB	domain
GntR	PF00392.16	gi|449067792|ref|YP_007434874.1|	-	0.064	12.6	0.1	0.28	10.6	0.1	2.0	1	1	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
TFIID-18kDa	PF02269.11	gi|449067792|ref|YP_007434874.1|	-	0.078	12.7	0.1	0.097	12.4	0.1	1.1	1	0	0	1	1	1	0	Transcription	initiation	factor	IID,	18kD	subunit
UvrB	PF12344.3	gi|449067792|ref|YP_007434874.1|	-	0.1	12.1	1.5	0.22	11.0	1.0	1.7	1	1	0	1	1	1	0	Ultra-violet	resistance	protein	B
DUF1832	PF08870.6	gi|449067792|ref|YP_007434874.1|	-	0.11	12.2	0.0	0.51	10.0	0.0	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1832)
GvpK	PF05121.7	gi|449067792|ref|YP_007434874.1|	-	0.17	11.7	3.3	0.59	9.9	2.2	2.0	1	1	0	1	1	1	0	Gas	vesicle	protein	K
IFP_35_N	PF07334.8	gi|449067792|ref|YP_007434874.1|	-	0.22	11.5	2.1	0.94	9.4	1.2	1.9	2	0	0	2	2	2	0	Interferon-induced	35	kDa	protein	(IFP	35)	N-terminus
Pox_A_type_inc	PF04508.7	gi|449067792|ref|YP_007434874.1|	-	2.5	8.1	8.2	1.4	8.9	2.0	3.0	2	1	1	3	3	3	0	Viral	A-type	inclusion	protein	repeat
PIN	PF01850.16	gi|449067793|ref|YP_007434875.1|	-	0.00046	20.5	0.8	0.00083	19.6	0.6	1.5	1	1	0	1	1	1	1	PIN	domain
CMD	PF02627.15	gi|449067794|ref|YP_007434876.1|	-	4.1e-24	84.2	0.0	5.1e-24	83.9	0.0	1.1	1	0	0	1	1	1	1	Carboxymuconolactone	decarboxylase	family
Glyco_hydro_15	PF00723.16	gi|449067797|ref|YP_007434879.1|	-	2e-44	151.8	0.3	1.1e-40	139.6	0.1	2.9	1	1	1	2	2	2	2	Glycosyl	hydrolases	family	15
TPR_19	PF14559.1	gi|449067797|ref|YP_007434879.1|	-	0.0016	18.7	0.0	0.0049	17.1	0.0	1.8	2	0	0	2	2	2	1	Tetratricopeptide	repeat
DUF1237	PF06824.6	gi|449067797|ref|YP_007434879.1|	-	0.0022	16.6	0.0	0.08	11.5	0.0	2.7	2	1	1	3	3	3	1	Protein	of	unknown	function	(DUF1237)
TPR_4	PF07721.9	gi|449067797|ref|YP_007434879.1|	-	0.0023	18.1	0.1	0.014	15.7	0.1	2.3	2	0	0	2	2	2	1	Tetratricopeptide	repeat
DUF608	PF04685.8	gi|449067797|ref|YP_007434879.1|	-	0.0036	16.0	0.6	0.0074	15.0	0.4	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF608
TPR_2	PF07719.12	gi|449067797|ref|YP_007434879.1|	-	0.0083	15.9	0.7	0.052	13.4	0.0	2.5	3	0	0	3	3	3	1	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|449067797|ref|YP_007434879.1|	-	0.012	16.2	0.1	0.067	13.8	0.0	2.1	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|449067797|ref|YP_007434879.1|	-	0.063	13.7	0.1	0.17	12.4	0.0	1.8	1	0	0	1	1	1	0	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|449067797|ref|YP_007434879.1|	-	0.066	13.1	0.1	0.18	11.7	0.0	1.7	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|449067797|ref|YP_007434879.1|	-	0.099	12.4	0.0	0.32	10.8	0.0	1.8	1	0	0	1	1	1	0	Tetratricopeptide	repeat
DUF3185	PF11381.3	gi|449067799|ref|YP_007434881.1|	-	0.0039	16.9	3.3	0.011	15.4	0.0	2.9	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF3185)
DUF1469	PF07332.6	gi|449067799|ref|YP_007434881.1|	-	0.064	12.9	0.1	0.064	12.9	0.1	3.1	2	1	2	4	4	4	0	Protein	of	unknown	function	(DUF1469)
DUF1070	PF06376.7	gi|449067799|ref|YP_007434881.1|	-	0.095	12.5	1.2	0.31	10.9	0.8	1.9	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1070)
PHO4	PF01384.15	gi|449067799|ref|YP_007434881.1|	-	1.4	7.5	6.9	1.7	7.2	4.8	1.2	1	0	0	1	1	1	0	Phosphate	transporter	family
DUF3093	PF11292.3	gi|449067799|ref|YP_007434881.1|	-	2.9	7.7	5.3	3.2	7.5	0.7	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3093)
DUF4131	PF13567.1	gi|449067799|ref|YP_007434881.1|	-	4.1	6.7	11.0	8.3	5.7	0.1	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4131)
UPF0016	PF01169.14	gi|449067799|ref|YP_007434881.1|	-	5.8	7.1	17.2	2.1	8.5	2.5	2.4	2	0	0	2	2	2	0	Uncharacterized	protein	family	UPF0016
MFS_1	PF07690.11	gi|449067800|ref|YP_007434882.1|	-	8.7e-22	77.2	53.0	7.8e-13	47.8	17.9	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
FIST	PF08495.5	gi|449067800|ref|YP_007434882.1|	-	0.032	13.3	0.1	0.053	12.6	0.1	1.3	1	0	0	1	1	1	0	FIST	N	domain
PIG-F	PF06699.6	gi|449067800|ref|YP_007434882.1|	-	0.52	10.2	9.0	0.76	9.6	0.8	3.1	3	0	0	3	3	3	0	GPI	biosynthesis	protein	family	Pig-F
DUF3278	PF11683.3	gi|449067800|ref|YP_007434882.1|	-	2.5	8.1	12.1	0.95	9.4	0.7	3.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3278)
EamA	PF00892.15	gi|449067801|ref|YP_007434883.1|	-	2.6e-12	46.8	40.0	1.1e-08	35.1	11.3	2.8	1	1	0	2	2	2	2	EamA-like	transporter	family
DUF1453	PF07301.6	gi|449067801|ref|YP_007434883.1|	-	3	7.7	16.3	0.054	13.3	3.8	2.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1453)
Nramp	PF01566.13	gi|449067802|ref|YP_007434884.1|	-	9.7e-32	110.1	18.1	1.3e-31	109.7	12.5	1.1	1	0	0	1	1	1	1	Natural	resistance-associated	macrophage	protein
Ferritin	PF00210.19	gi|449067803|ref|YP_007434885.1|	-	2.6e-20	72.6	0.2	3.2e-20	72.3	0.1	1.1	1	0	0	1	1	1	1	Ferritin-like	domain
Rubrerythrin	PF02915.12	gi|449067803|ref|YP_007434885.1|	-	0.00011	22.5	0.0	0.00014	22.1	0.0	1.1	1	0	0	1	1	1	1	Rubrerythrin
DUF4439	PF14530.1	gi|449067803|ref|YP_007434885.1|	-	0.02	15.3	0.1	1.3	9.4	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4439)
Ferritin_2	PF13668.1	gi|449067803|ref|YP_007434885.1|	-	0.12	12.2	0.0	0.18	11.7	0.0	1.3	1	0	0	1	1	1	0	Ferritin-like	domain
Rieske	PF00355.21	gi|449067804|ref|YP_007434886.1|	-	1.1e-13	50.5	0.0	1.3e-13	50.2	0.0	1.1	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Rieske_2	PF13806.1	gi|449067804|ref|YP_007434886.1|	-	0.0017	18.0	0.0	0.0023	17.6	0.0	1.2	1	0	0	1	1	1	1	Rieske-like	[2Fe-2S]	domain
Thioredoxin	PF00085.15	gi|449067805|ref|YP_007434887.1|	-	1.5e-23	82.4	0.0	1.9e-23	82.0	0.0	1.1	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.1	gi|449067805|ref|YP_007434887.1|	-	4.3e-08	33.3	0.0	1.6e-06	28.3	0.0	2.2	1	1	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin_8	PF13905.1	gi|449067805|ref|YP_007434887.1|	-	3.7e-06	26.9	0.0	8.8e-05	22.5	0.0	2.3	1	1	1	2	2	2	1	Thioredoxin-like
Redoxin	PF08534.5	gi|449067805|ref|YP_007434887.1|	-	5.1e-05	22.8	0.0	9.7e-05	21.9	0.0	1.5	1	1	0	1	1	1	1	Redoxin
Thioredoxin_3	PF13192.1	gi|449067805|ref|YP_007434887.1|	-	0.0013	18.4	0.0	0.0031	17.3	0.0	1.7	1	1	1	2	2	2	1	Thioredoxin	domain
AhpC-TSA	PF00578.16	gi|449067805|ref|YP_007434887.1|	-	0.0015	18.2	0.0	0.012	15.3	0.0	1.9	1	1	1	2	2	2	1	AhpC/TSA	family
Thioredoxin_9	PF14595.1	gi|449067805|ref|YP_007434887.1|	-	0.0096	15.4	0.0	0.014	14.9	0.0	1.3	1	0	0	1	1	1	1	Thioredoxin
ORF6N	PF10543.4	gi|449067805|ref|YP_007434887.1|	-	0.042	13.8	0.0	0.058	13.4	0.0	1.3	1	0	0	1	1	1	0	ORF6N	domain
Endonuc_Holl	PF10107.4	gi|449067806|ref|YP_007434888.1|	-	1.9e-55	186.8	5.7	2.5e-55	186.4	4.0	1.1	1	0	0	1	1	1	1	Endonuclease	related	to	archaeal	Holliday	junction	resolvase
Endotoxin_N	PF03945.9	gi|449067806|ref|YP_007434888.1|	-	0.012	15.0	2.5	0.02	14.2	1.7	1.3	1	0	0	1	1	1	0	delta	endotoxin,	N-terminal	domain
DUF929	PF06053.6	gi|449067806|ref|YP_007434888.1|	-	0.046	12.8	0.8	0.13	11.2	0.7	1.8	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF929)
eIF3_p135	PF12807.2	gi|449067806|ref|YP_007434888.1|	-	0.046	13.6	6.4	0.16	11.9	3.4	1.9	1	1	1	2	2	2	0	Translation	initiation	factor	eIF3	subunit	135
IncA	PF04156.9	gi|449067806|ref|YP_007434888.1|	-	0.075	12.6	6.4	0.024	14.2	1.5	1.9	2	0	0	2	2	2	0	IncA	protein
DUF4381	PF14316.1	gi|449067806|ref|YP_007434888.1|	-	0.079	13.0	0.0	0.12	12.5	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4381)
EphA2_TM	PF14575.1	gi|449067806|ref|YP_007434888.1|	-	0.087	13.2	0.1	0.16	12.3	0.1	1.5	1	0	0	1	1	1	0	Ephrin	type-A	receptor	2	transmembrane	domain
Shisa	PF13908.1	gi|449067806|ref|YP_007434888.1|	-	0.15	12.1	0.1	0.19	11.8	0.1	1.2	1	0	0	1	1	1	0	Wnt	and	FGF	inhibitory	regulator
DUF1043	PF06295.7	gi|449067806|ref|YP_007434888.1|	-	0.17	11.5	2.1	0.37	10.4	1.5	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1043)
DUF3573	PF12097.3	gi|449067806|ref|YP_007434888.1|	-	0.35	9.4	1.6	0.51	8.8	1.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3573)
TarH	PF02203.10	gi|449067806|ref|YP_007434888.1|	-	0.41	10.4	4.2	0.23	11.2	1.5	1.7	2	1	0	2	2	2	0	Tar	ligand	binding	domain	homologue
HN	PF00423.14	gi|449067806|ref|YP_007434888.1|	-	0.75	8.0	3.4	0.95	7.6	2.3	1.1	1	0	0	1	1	1	0	Haemagglutinin-neuraminidase
DUF2497	PF10691.4	gi|449067806|ref|YP_007434888.1|	-	2.1	8.3	5.9	6.4	6.8	1.1	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2497)
DUF4446	PF14584.1	gi|449067806|ref|YP_007434888.1|	-	2.8	7.7	6.6	0.44	10.3	1.8	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4446)
DUF4382	PF14321.1	gi|449067807|ref|YP_007434889.1|	-	2.7e-23	82.5	0.1	3.2e-23	82.3	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4382)
OppC_N	PF12911.2	gi|449067807|ref|YP_007434889.1|	-	0.034	13.5	1.4	0.079	12.3	1.0	1.6	1	0	0	1	1	1	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
Glycos_transf_1	PF00534.15	gi|449067809|ref|YP_007434891.1|	-	3.3e-23	81.9	0.0	5.2e-23	81.3	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|449067809|ref|YP_007434891.1|	-	1.7e-06	28.2	0.0	6.4e-06	26.3	0.0	1.8	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|449067809|ref|YP_007434891.1|	-	1.9e-05	24.8	0.0	3.1e-05	24.1	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
AA_permease_2	PF13520.1	gi|449067810|ref|YP_007434892.1|	-	7.7e-17	60.9	56.8	9.9e-17	60.5	39.4	1.1	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|449067810|ref|YP_007434892.1|	-	3.6e-16	58.5	51.2	7.5e-16	57.5	35.5	1.5	1	1	0	1	1	1	1	Amino	acid	permease
DUF4229	PF14012.1	gi|449067810|ref|YP_007434892.1|	-	0.13	12.2	0.1	0.13	12.2	0.1	4.6	5	1	0	5	5	5	0	Protein	of	unknown	function	(DUF4229)
DUF2250	PF10007.4	gi|449067811|ref|YP_007434893.1|	-	7.2e-06	25.8	0.5	2.4e-05	24.1	0.4	1.9	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF2513	PF10711.4	gi|449067811|ref|YP_007434893.1|	-	0.032	14.2	0.0	0.048	13.7	0.0	1.4	1	1	0	1	1	1	0	Hypothetical	protein	(DUF2513)
Abhydrolase_6	PF12697.2	gi|449067812|ref|YP_007434894.1|	-	1.9e-23	83.5	0.0	3.3e-16	59.8	0.0	2.0	1	1	1	2	2	2	2	Alpha/beta	hydrolase	family
Abhydrolase_5	PF12695.2	gi|449067812|ref|YP_007434894.1|	-	2.1e-18	66.4	0.0	2.6e-18	66.1	0.0	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|449067812|ref|YP_007434894.1|	-	3.8e-09	36.4	0.1	1.7e-07	31.0	0.0	2.1	1	1	1	2	2	2	1	alpha/beta	hydrolase	fold
Hydrolase_4	PF12146.3	gi|449067812|ref|YP_007434894.1|	-	0.0013	18.5	0.0	0.0026	17.5	0.0	1.4	1	0	0	1	1	1	1	Putative	lysophospholipase
DUF1057	PF06342.7	gi|449067812|ref|YP_007434894.1|	-	0.014	14.1	0.0	0.039	12.7	0.0	1.6	1	1	0	1	1	1	0	Alpha/beta	hydrolase	of	unknown	function	(DUF1057)
Ndr	PF03096.9	gi|449067812|ref|YP_007434894.1|	-	0.017	13.5	0.0	0.029	12.8	0.0	1.4	1	1	0	1	1	1	0	Ndr	family
CAF1	PF04857.15	gi|449067812|ref|YP_007434894.1|	-	0.11	11.8	0.0	9.6	5.4	0.0	2.1	2	0	0	2	2	2	0	CAF1	family	ribonuclease
FSH1	PF03959.8	gi|449067812|ref|YP_007434894.1|	-	0.12	11.8	0.0	0.18	11.2	0.0	1.2	1	0	0	1	1	1	0	Serine	hydrolase	(FSH1)
Abhydrolase_2	PF02230.11	gi|449067812|ref|YP_007434894.1|	-	0.13	11.7	0.0	0.19	11.1	0.0	1.5	1	1	0	1	1	1	0	Phospholipase/Carboxylesterase
DUF2250	PF10007.4	gi|449067813|ref|YP_007434895.1|	-	6.5e-68	224.6	15.7	4.4e-37	125.8	2.4	2.0	2	0	0	2	2	2	2	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF4393	PF14337.1	gi|449067813|ref|YP_007434895.1|	-	1e-06	28.3	0.4	0.019	14.4	0.0	2.2	1	1	1	2	2	2	2	Domain	of	unknown	function	(DUF4393)
DUF4423	PF14394.1	gi|449067813|ref|YP_007434895.1|	-	2.7e-05	23.7	0.7	0.00079	19.0	0.1	2.1	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4423)
Phage_rep_org_N	PF09681.5	gi|449067813|ref|YP_007434895.1|	-	0.0031	17.0	0.2	0.76	9.3	0.0	2.2	2	0	0	2	2	2	2	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
DUF2806	PF10987.3	gi|449067813|ref|YP_007434895.1|	-	0.013	15.0	0.2	1.1	8.6	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2806)
TrmB	PF01978.14	gi|449067813|ref|YP_007434895.1|	-	0.016	14.8	4.0	0.045	13.4	0.0	3.0	3	1	0	3	3	2	0	Sugar-specific	transcriptional	regulator	TrmB
FUR	PF01475.14	gi|449067813|ref|YP_007434895.1|	-	0.028	14.3	0.4	0.075	12.9	0.1	1.9	2	0	0	2	2	2	0	Ferric	uptake	regulator	family
HTH_45	PF14947.1	gi|449067813|ref|YP_007434895.1|	-	0.13	12.0	6.8	1.2	8.9	0.2	3.6	3	1	0	3	3	3	0	Winged	helix-turn-helix
PadR	PF03551.9	gi|449067813|ref|YP_007434895.1|	-	0.32	10.8	8.5	6	6.7	0.8	4.2	2	2	1	3	3	3	0	Transcriptional	regulator	PadR-like	family
HTH_27	PF13463.1	gi|449067813|ref|YP_007434895.1|	-	0.33	11.3	7.1	1.2	9.5	0.2	3.7	4	1	0	4	4	4	0	Winged	helix	DNA-binding	domain
RPEL	PF02755.10	gi|449067813|ref|YP_007434895.1|	-	0.45	9.9	4.0	7.7	5.9	0.3	2.9	2	0	0	2	2	2	0	RPEL	repeat
CxxCxxCC	PF03692.10	gi|449067815|ref|YP_007434897.1|	-	5.7e-07	29.9	0.4	9.6e-07	29.1	0.3	1.3	1	0	0	1	1	1	1	Putative	zinc-	or	iron-chelating	domain
Sigma70_r3	PF04539.11	gi|449067815|ref|YP_007434897.1|	-	0.032	14.1	0.1	0.063	13.1	0.0	1.4	1	0	0	1	1	1	0	Sigma-70	region	3
DrsE	PF02635.10	gi|449067817|ref|YP_007434899.1|	-	0.1	12.6	0.0	0.14	12.2	0.0	1.2	1	0	0	1	1	1	0	DsrE/DsrF-like	family
Sugar_tr	PF00083.19	gi|449067818|ref|YP_007434900.1|	-	2.2e-28	99.0	40.8	4.7e-19	68.3	10.2	2.0	1	1	0	2	2	2	2	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|449067818|ref|YP_007434900.1|	-	2.2e-28	99.0	56.4	1.8e-16	59.8	18.9	2.8	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_2	PF13347.1	gi|449067818|ref|YP_007434900.1|	-	4e-10	38.6	12.5	4e-10	38.6	8.6	3.0	2	1	1	3	3	3	2	MFS/sugar	transport	protein
MFS_1_like	PF12832.2	gi|449067818|ref|YP_007434900.1|	-	0.007	16.1	0.2	0.007	16.1	0.1	4.7	3	2	1	4	4	4	1	MFS_1	like	family
Amidohydro_1	PF01979.15	gi|449067819|ref|YP_007434901.1|	-	8e-51	173.6	0.0	9.4e-51	173.4	0.0	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|449067819|ref|YP_007434901.1|	-	5.3e-13	49.6	0.0	1.1e-10	41.9	0.0	2.3	1	1	0	1	1	1	1	Amidohydrolase
Amidohydro_5	PF13594.1	gi|449067819|ref|YP_007434901.1|	-	5.4e-12	45.3	0.0	2.3e-11	43.3	0.0	2.1	2	0	0	2	2	2	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|449067819|ref|YP_007434901.1|	-	4.4e-11	42.6	0.6	3.3e-07	29.8	0.0	2.2	2	0	0	2	2	2	2	Amidohydrolase	family
AP_endonuc_2	PF01261.19	gi|449067819|ref|YP_007434901.1|	-	0.053	12.7	0.1	0.42	9.8	0.0	2.2	2	0	0	2	2	2	0	Xylose	isomerase-like	TIM	barrel
Aminotran_1_2	PF00155.16	gi|449067820|ref|YP_007434902.1|	-	4.9e-54	183.6	0.0	6e-54	183.3	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.14	gi|449067820|ref|YP_007434902.1|	-	6.1e-12	44.9	0.0	8.7e-12	44.4	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.15	gi|449067820|ref|YP_007434902.1|	-	1.8e-08	33.0	0.0	2e-08	32.9	0.0	1.1	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Alliinase_C	PF04864.8	gi|449067820|ref|YP_007434902.1|	-	1.1e-06	27.6	0.1	1.4e-06	27.2	0.1	1.2	1	0	0	1	1	1	1	Allinase
Beta_elim_lyase	PF01212.16	gi|449067820|ref|YP_007434902.1|	-	3.2e-05	23.2	0.0	6e-05	22.3	0.0	1.4	1	0	0	1	1	1	1	Beta-eliminating	lyase
DegT_DnrJ_EryC1	PF01041.12	gi|449067820|ref|YP_007434902.1|	-	0.00036	19.6	0.0	0.00069	18.7	0.0	1.4	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
RNase_Zc3h12a	PF11977.3	gi|449067820|ref|YP_007434902.1|	-	0.029	14.2	0.1	0.048	13.4	0.0	1.5	1	1	0	1	1	1	0	Zc3h12a-like	Ribonuclease	NYN	domain
OKR_DC_1	PF01276.15	gi|449067820|ref|YP_007434902.1|	-	0.077	11.5	0.1	0.13	10.7	0.0	1.5	1	1	0	1	1	1	0	Orn/Lys/Arg	decarboxylase,	major	domain
Ycf54	PF10674.4	gi|449067820|ref|YP_007434902.1|	-	0.099	12.7	0.0	0.47	10.5	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2488)
Ald_Xan_dh_C2	PF02738.13	gi|449067821|ref|YP_007434903.1|	-	9.1e-105	351.0	0.0	1.2e-79	268.1	0.0	2.1	1	1	1	2	2	2	2	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|449067821|ref|YP_007434903.1|	-	5.3e-16	58.6	0.1	2e-15	56.8	0.0	2.0	2	0	0	2	2	2	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
CitMHS	PF03600.11	gi|449067822|ref|YP_007434904.1|	-	6.6e-26	90.7	3.0	1.1e-22	80.1	0.0	2.1	1	1	1	2	2	2	1	Citrate	transporter
Na_sulph_symp	PF00939.14	gi|449067822|ref|YP_007434904.1|	-	2.9e-13	49.4	35.6	4.2e-10	39.1	8.7	2.5	2	1	0	2	2	2	2	Sodium:sulfate	symporter	transmembrane	region
TrkA_C	PF02080.16	gi|449067822|ref|YP_007434904.1|	-	3.6e-13	48.9	1.0	2.7e-09	36.4	0.0	2.8	3	0	0	3	3	3	2	TrkA-C	domain
DsbD_2	PF13386.1	gi|449067823|ref|YP_007434905.1|	-	0.0067	16.1	9.6	0.0088	15.8	6.6	1.3	1	1	0	1	1	1	1	Cytochrome	C	biogenesis	protein	transmembrane	region
NicO	PF03824.11	gi|449067823|ref|YP_007434905.1|	-	0.0071	15.6	5.1	0.0071	15.6	3.5	2.3	2	0	0	2	2	2	1	High-affinity	nickel-transport	protein
Na_H_Exchanger	PF00999.16	gi|449067824|ref|YP_007434906.1|	-	4.5e-35	120.9	47.4	5.5e-35	120.6	32.9	1.1	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
CBS	PF00571.23	gi|449067824|ref|YP_007434906.1|	-	1e-17	63.6	2.3	2.6e-09	36.6	0.3	2.5	2	0	0	2	2	2	2	CBS	domain
DUF3782	PF12644.2	gi|449067825|ref|YP_007434907.1|	-	1.1e-32	111.5	21.9	1.3e-24	85.7	5.4	3.8	1	1	4	5	5	5	5	Protein	of	unknown	function	(DUF3782)
DUF1626	PF07788.6	gi|449067825|ref|YP_007434907.1|	-	1.2e-26	92.2	5.5	1.2e-26	92.2	3.8	2.6	2	1	1	3	3	3	1	Protein	of	unknown	function	(DUF1626)
TcpF	PF06340.6	gi|449067825|ref|YP_007434907.1|	-	0.063	12.3	0.9	1.3	8.0	0.5	2.2	1	1	1	2	2	2	0	Vibrio	cholerae	toxin	co-regulated	pilus	biosynthesis	protein	F
DUF4143	PF13635.1	gi|449067825|ref|YP_007434907.1|	-	0.21	11.7	2.1	0.63	10.2	1.5	2.1	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4143)
SEEK1	PF15357.1	gi|449067825|ref|YP_007434907.1|	-	0.53	10.1	4.0	3.6	7.4	2.8	2.0	1	1	0	1	1	1	0	Psoriasis	susceptibility	1	candidate	1
Toxin_36	PF10550.4	gi|449067825|ref|YP_007434907.1|	-	2.4	9.4	14.9	4.6e+02	2.4	0.2	7.1	2	1	5	7	7	7	0	Conantokin-G	mollusc-toxin
Cyclase	PF04199.8	gi|449067826|ref|YP_007434908.1|	-	4.1e-05	23.3	0.1	5.1e-05	23.0	0.0	1.2	1	0	0	1	1	1	1	Putative	cyclase
Cyclase	PF04199.8	gi|449067827|ref|YP_007434909.1|	-	1.2e-07	31.5	0.0	1.5e-07	31.2	0.0	1.2	1	0	0	1	1	1	1	Putative	cyclase
Thermopsin	PF05317.6	gi|449067829|ref|YP_007434911.1|	-	1.7e-74	250.1	26.3	1.7e-74	250.1	18.2	5.7	3	2	1	4	4	4	1	Thermopsin
KSHV_K1	PF11049.3	gi|449067829|ref|YP_007434911.1|	-	1.8	8.6	8.5	3.4	7.7	0.1	3.9	4	0	0	4	4	4	0	Glycoprotein	K1	of	Kaposi's	sarcoma-associated	herpes	virus
GATase_6	PF13522.1	gi|449067830|ref|YP_007434912.1|	-	3.8e-09	36.5	0.0	6.4e-09	35.8	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_4	PF13230.1	gi|449067830|ref|YP_007434912.1|	-	3.6e-05	22.6	0.0	4.5e-05	22.2	0.0	1.1	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
GATase_2	PF00310.16	gi|449067830|ref|YP_007434912.1|	-	0.00083	18.1	0.0	0.0009	18.0	0.0	1.1	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
MFS_1	PF07690.11	gi|449067831|ref|YP_007434913.1|	-	9.7e-23	80.4	47.7	9.7e-23	80.4	33.1	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|449067831|ref|YP_007434913.1|	-	8.2e-21	74.0	41.7	5.6e-17	61.4	11.3	2.5	2	1	0	2	2	2	2	Sugar	(and	other)	transporter
Glyco_hydro_1	PF00232.13	gi|449067832|ref|YP_007434914.1|	-	2.3e-62	210.6	3.8	4e-55	186.8	0.8	2.8	2	1	0	2	2	2	2	Glycosyl	hydrolase	family	1
Cellulase	PF00150.13	gi|449067832|ref|YP_007434914.1|	-	5.8e-05	22.4	0.2	0.00012	21.3	0.1	1.5	1	1	0	1	1	1	1	Cellulase	(glycosyl	hydrolase	family	5)
DUF1648	PF07853.6	gi|449067833|ref|YP_007434915.1|	-	8.5e-05	21.9	1.8	8.5e-05	21.9	1.3	3.3	3	1	0	3	3	3	1	Protein	of	unknown	function	(DUF1648)
GntR	PF00392.16	gi|449067834|ref|YP_007434916.1|	-	6.7e-18	63.8	0.0	1e-17	63.3	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HTH_Crp_2	PF13545.1	gi|449067834|ref|YP_007434916.1|	-	6.6e-06	25.8	0.0	1e-05	25.2	0.0	1.3	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_41	PF14502.1	gi|449067834|ref|YP_007434916.1|	-	1.2e-05	24.8	0.0	4.6e-05	22.9	0.0	1.8	2	0	0	2	2	2	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|449067834|ref|YP_007434916.1|	-	0.0017	18.0	0.3	0.0063	16.2	0.1	2.0	1	1	1	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_36	PF13730.1	gi|449067834|ref|YP_007434916.1|	-	0.0059	16.7	0.0	0.016	15.2	0.0	1.8	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_17	PF12728.2	gi|449067834|ref|YP_007434916.1|	-	0.0064	16.7	0.0	0.074	13.3	0.0	2.2	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|449067834|ref|YP_007434916.1|	-	0.011	15.1	0.0	0.023	14.0	0.0	1.7	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
Transcrip_reg	PF01709.15	gi|449067834|ref|YP_007434916.1|	-	0.019	14.0	0.0	0.027	13.5	0.0	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
DUF977	PF06163.6	gi|449067834|ref|YP_007434916.1|	-	0.029	14.1	0.1	0.037	13.7	0.1	1.2	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF977)
MarR	PF01047.17	gi|449067834|ref|YP_007434916.1|	-	0.047	13.3	0.0	0.091	12.4	0.0	1.5	1	0	0	1	1	1	0	MarR	family
Fe_dep_repress	PF01325.14	gi|449067834|ref|YP_007434916.1|	-	0.07	13.0	0.0	0.15	12.0	0.0	1.6	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
RPA_C	PF08784.6	gi|449067834|ref|YP_007434916.1|	-	0.078	13.3	0.0	0.19	12.1	0.0	1.6	2	0	0	2	2	2	0	Replication	protein	A	C	terminal
Glyco_hydro_12	PF01670.11	gi|449067836|ref|YP_007434918.1|	-	9.5e-16	57.9	2.3	2.2e-15	56.7	1.6	1.6	1	1	0	1	1	1	1	Glycosyl	hydrolase	family	12
A2M_N	PF01835.14	gi|449067837|ref|YP_007434919.1|	-	0.0015	18.7	5.3	0.11	12.7	0.0	3.8	4	0	0	4	4	4	2	MG2	domain
TMEM154	PF15102.1	gi|449067837|ref|YP_007434919.1|	-	0.0056	16.3	4.8	0.015	14.9	3.3	1.7	1	0	0	1	1	1	1	TMEM154	protein	family
Rifin_STEVOR	PF02009.11	gi|449067837|ref|YP_007434919.1|	-	0.0062	16.2	0.4	0.0062	16.2	0.3	1.9	2	0	0	2	2	2	1	Rifin/stevor	family
SBF	PF01758.11	gi|449067837|ref|YP_007434919.1|	-	0.013	14.9	2.2	0.045	13.1	0.0	2.5	2	0	0	2	2	2	0	Sodium	Bile	acid	symporter	family
MSC	PF09402.5	gi|449067837|ref|YP_007434919.1|	-	0.37	9.4	0.8	0.54	8.9	0.6	1.2	1	0	0	1	1	1	0	Man1-Src1p-C-terminal	domain
MGC-24	PF05283.6	gi|449067837|ref|YP_007434919.1|	-	5.9	6.6	14.4	0.021	14.6	2.8	2.0	2	0	0	2	2	2	0	Multi-glycosylated	core	protein	24	(MGC-24)
DUF912	PF06024.7	gi|449067837|ref|YP_007434919.1|	-	8	6.5	8.0	0.19	11.7	0.6	1.9	2	0	0	2	2	2	0	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF912)
DUF973	PF06157.6	gi|449067839|ref|YP_007434921.1|	-	2.1e-53	181.1	38.9	2.1e-53	181.1	26.9	1.6	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF973)
DUF996	PF06195.8	gi|449067839|ref|YP_007434921.1|	-	0.38	10.7	41.0	0.061	13.3	11.1	2.7	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF996)
DUF973	PF06157.6	gi|449067841|ref|YP_007434923.1|	-	5.9e-26	91.0	60.7	2.1e-23	82.7	42.0	2.9	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
DUF2371	PF10177.4	gi|449067841|ref|YP_007434923.1|	-	8.7	6.2	6.7	6.2	6.7	0.0	3.0	3	0	0	3	3	3	0	Uncharacterised	conserved	protein	(DUF2371)
Aldedh	PF00171.17	gi|449067842|ref|YP_007434924.1|	-	4.4e-164	546.1	0.1	5e-164	546.0	0.1	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
EB_dh	PF09459.5	gi|449067843|ref|YP_007434925.1|	-	3e-66	223.5	3.0	3.6e-66	223.2	2.1	1.1	1	0	0	1	1	1	1	Ethylbenzene	dehydrogenase
Rieske	PF00355.21	gi|449067845|ref|YP_007434927.1|	-	1e-11	44.2	0.2	2.3e-11	43.1	0.1	1.6	1	1	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Cytochrom_B_N_2	PF13631.1	gi|449067846|ref|YP_007434928.1|	-	7.8e-54	181.9	10.2	7.8e-54	181.9	7.0	4.0	4	2	1	5	5	5	2	Cytochrome	b(N-terminal)/b6/petB
Cytochrom_B_N	PF00033.14	gi|449067846|ref|YP_007434928.1|	-	0.00097	18.5	20.3	0.00097	18.5	14.1	3.2	2	2	0	2	2	2	1	Cytochrome	b(N-terminal)/b6/petB
Cytochrom_B_C	PF00032.12	gi|449067846|ref|YP_007434928.1|	-	0.0012	18.9	3.0	0.0012	18.9	2.1	4.6	6	1	0	6	6	6	1	Cytochrome	b(C-terminal)/b6/petD
DUF3357	PF11837.3	gi|449067846|ref|YP_007434928.1|	-	2.4	8.0	4.4	16	5.3	0.0	3.2	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF3357)
ABM	PF03992.11	gi|449067847|ref|YP_007434929.1|	-	4.1e-15	55.5	0.0	4.8e-15	55.3	0.0	1.1	1	0	0	1	1	1	1	Antibiotic	biosynthesis	monooxygenase
SOR	PF07682.6	gi|449067847|ref|YP_007434929.1|	-	0.0027	16.3	0.6	0.051	12.1	0.2	2.0	1	1	1	2	2	2	2	Sulphur	oxygenase	reductase
DDE_Tnp_1_6	PF13751.1	gi|449067848|ref|YP_007434930.1|	-	0.0041	17.1	0.0	0.0053	16.7	0.0	1.2	1	0	0	1	1	1	1	Transposase	DDE	domain
DUF2276	PF10040.4	gi|449067849|ref|YP_007434931.1|	-	5.8e-29	100.7	0.0	8.5e-29	100.2	0.0	1.3	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2276)
Glycos_transf_2	PF00535.21	gi|449067850|ref|YP_007434932.1|	-	2.9e-16	59.6	0.3	4.1e-16	59.1	0.2	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|449067850|ref|YP_007434932.1|	-	1.4e-08	34.7	0.0	2.7e-08	33.9	0.0	1.4	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Rhamno_transf	PF11316.3	gi|449067850|ref|YP_007434932.1|	-	0.005	16.0	0.0	0.0085	15.3	0.0	1.3	1	0	0	1	1	1	1	Putative	rhamnosyl	transferase
Galactosyl_T	PF01762.16	gi|449067850|ref|YP_007434932.1|	-	0.14	11.7	0.9	0.23	11.0	0.6	1.3	1	0	0	1	1	1	0	Galactosyltransferase
bPH_3	PF14470.1	gi|449067852|ref|YP_007434934.1|	-	0.1	12.8	0.4	0.22	11.8	0.3	1.5	1	0	0	1	1	1	0	Bacterial	PH	domain
TMEMspv1-c74-12	PF11044.3	gi|449067852|ref|YP_007434934.1|	-	0.19	11.3	0.1	0.19	11.3	0.1	2.4	2	0	0	2	2	2	0	Plectrovirus	spv1-c74	ORF	12	transmembrane	protein
CAAD	PF14159.1	gi|449067852|ref|YP_007434934.1|	-	0.37	10.4	2.4	1.8	8.2	0.1	2.4	2	0	0	2	2	2	0	CAAD	domains	of	cyanobacterial	aminoacyl-tRNA	synthetase
TMF_DNA_bd	PF12329.3	gi|449067853|ref|YP_007434935.1|	-	5.7e-07	29.2	13.3	0.0058	16.4	3.5	2.9	1	1	1	2	2	2	2	TATA	element	modulatory	factor	1	DNA	binding
Reo_sigmaC	PF04582.7	gi|449067853|ref|YP_007434935.1|	-	1.7e-06	27.4	2.1	5.1e-06	25.8	1.5	1.6	1	1	0	1	1	1	1	Reovirus	sigma	C	capsid	protein
DUF4116	PF13475.1	gi|449067853|ref|YP_007434935.1|	-	5.6e-06	25.7	0.1	6.7e-05	22.2	0.0	2.7	3	0	0	3	3	2	1	Domain	of	unknown	function	(DUF4116)
DUF16	PF01519.11	gi|449067853|ref|YP_007434935.1|	-	2.7e-05	24.3	12.9	0.0066	16.6	2.0	2.8	1	1	1	2	2	2	2	Protein	of	unknown	function	DUF16
SlyX	PF04102.7	gi|449067853|ref|YP_007434935.1|	-	3.4e-05	24.1	6.2	0.041	14.2	0.4	2.5	1	1	1	2	2	2	2	SlyX
ALMT	PF11744.3	gi|449067853|ref|YP_007434935.1|	-	0.00012	20.8	1.8	0.00017	20.3	1.2	1.3	1	0	0	1	1	1	1	Aluminium	activated	malate	transporter
MCPsignal	PF00015.16	gi|449067853|ref|YP_007434935.1|	-	0.00017	21.2	6.7	0.00026	20.6	4.7	1.3	1	0	0	1	1	1	1	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
Fib_alpha	PF08702.5	gi|449067853|ref|YP_007434935.1|	-	0.00029	20.9	8.3	0.048	13.7	1.2	2.5	1	1	1	2	2	2	2	Fibrinogen	alpha/beta	chain	family
DUF948	PF06103.6	gi|449067853|ref|YP_007434935.1|	-	0.00033	20.4	6.5	0.17	11.7	0.2	2.5	1	1	1	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF948)
AAA_13	PF13166.1	gi|449067853|ref|YP_007434935.1|	-	0.00036	19.1	7.4	0.00055	18.5	5.1	1.2	1	0	0	1	1	1	1	AAA	domain
DUF1664	PF07889.7	gi|449067853|ref|YP_007434935.1|	-	0.00073	19.3	7.4	0.0011	18.7	2.7	2.3	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF1664)
ATG16	PF08614.6	gi|449067853|ref|YP_007434935.1|	-	0.00077	19.3	11.2	0.045	13.5	2.9	2.2	1	1	1	2	2	2	2	Autophagy	protein	16	(ATG16)
DASH_Duo1	PF08651.5	gi|449067853|ref|YP_007434935.1|	-	0.00081	18.9	6.4	0.12	11.9	0.2	2.5	1	1	0	2	2	2	2	DASH	complex	subunit	Duo1
NPV_P10	PF05531.7	gi|449067853|ref|YP_007434935.1|	-	0.00084	19.5	4.4	0.13	12.5	0.6	2.9	1	1	1	2	2	2	1	Nucleopolyhedrovirus	P10	protein
Lebercilin	PF15619.1	gi|449067853|ref|YP_007434935.1|	-	0.00085	18.7	6.1	0.0015	18.0	4.2	1.4	1	0	0	1	1	1	1	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
IncA	PF04156.9	gi|449067853|ref|YP_007434935.1|	-	0.00097	18.7	11.0	0.0022	17.6	7.4	1.7	1	1	0	1	1	1	1	IncA	protein
Bacillus_HBL	PF05791.6	gi|449067853|ref|YP_007434935.1|	-	0.0013	18.1	2.8	0.0013	18.1	1.9	2.1	1	1	1	2	2	2	1	Bacillus	haemolytic	enterotoxin	(HBL)
Herpes_U30	PF04523.8	gi|449067853|ref|YP_007434935.1|	-	0.0014	16.2	0.7	0.0017	15.9	0.5	1.1	1	0	0	1	1	1	1	Herpes	virus	tegument	protein	U30
Spc7	PF08317.6	gi|449067853|ref|YP_007434935.1|	-	0.0019	16.8	8.4	0.0026	16.5	5.8	1.2	1	0	0	1	1	1	1	Spc7	kinetochore	protein
FH2	PF02181.18	gi|449067853|ref|YP_007434935.1|	-	0.0035	16.2	3.3	0.0055	15.6	2.3	1.2	1	0	0	1	1	1	1	Formin	Homology	2	Domain
Atg14	PF10186.4	gi|449067853|ref|YP_007434935.1|	-	0.0036	16.3	11.5	0.0076	15.2	8.0	1.5	1	1	0	1	1	1	1	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
DUF3584	PF12128.3	gi|449067853|ref|YP_007434935.1|	-	0.0041	14.5	4.7	0.0051	14.2	3.2	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3584)
FliJ	PF02050.11	gi|449067853|ref|YP_007434935.1|	-	0.0065	16.5	9.9	0.23	11.4	1.1	2.4	1	1	1	2	2	2	1	Flagellar	FliJ	protein
TBPIP	PF07106.8	gi|449067853|ref|YP_007434935.1|	-	0.0081	15.7	6.9	0.022	14.2	4.7	1.9	1	1	0	1	1	1	1	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
FUSC-like	PF12805.2	gi|449067853|ref|YP_007434935.1|	-	0.011	14.7	1.5	0.018	13.9	1.0	1.4	1	0	0	1	1	1	0	FUSC-like	inner	membrane	protein	yccS
DUF3972	PF13118.1	gi|449067853|ref|YP_007434935.1|	-	0.011	15.8	5.8	0.18	11.9	4.0	2.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3972)
ADIP	PF11559.3	gi|449067853|ref|YP_007434935.1|	-	0.012	15.5	9.7	0.1	12.5	1.0	2.2	1	1	1	2	2	2	0	Afadin-	and	alpha	-actinin-Binding
CENP-Q	PF13094.1	gi|449067853|ref|YP_007434935.1|	-	0.017	15.1	8.6	0.27	11.2	2.4	2.1	1	1	1	2	2	2	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
Vps51	PF08700.6	gi|449067853|ref|YP_007434935.1|	-	0.018	14.8	5.4	0.34	10.7	1.3	2.5	2	0	0	2	2	2	0	Vps51/Vps67
Nucleoporin_C	PF03177.9	gi|449067853|ref|YP_007434935.1|	-	0.018	13.5	1.0	0.025	13.0	0.7	1.3	1	0	0	1	1	1	0	Non-repetitive/WGA-negative	nucleoporin	C-terminal
TPR_MLP1_2	PF07926.7	gi|449067853|ref|YP_007434935.1|	-	0.026	14.2	10.2	0.03	14.0	5.9	1.9	1	1	0	1	1	1	0	TPR/MLP1/MLP2-like	protein
DUF2570	PF10828.3	gi|449067853|ref|YP_007434935.1|	-	0.027	14.0	9.7	0.092	12.3	6.1	2.2	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2570)
DUF1319	PF07028.6	gi|449067853|ref|YP_007434935.1|	-	0.037	14.2	9.9	15	5.7	0.0	3.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1319)
BLOC1_2	PF10046.4	gi|449067853|ref|YP_007434935.1|	-	0.038	14.1	7.6	0.48	10.6	2.9	2.5	1	1	1	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
IFT57	PF10498.4	gi|449067853|ref|YP_007434935.1|	-	0.039	12.7	7.1	0.058	12.1	4.9	1.3	1	0	0	1	1	1	0	Intra-flagellar	transport	protein	57
Prefoldin	PF02996.12	gi|449067853|ref|YP_007434935.1|	-	0.044	13.4	8.6	0.11	12.1	1.0	2.9	1	1	2	3	3	3	0	Prefoldin	subunit
TMPIT	PF07851.8	gi|449067853|ref|YP_007434935.1|	-	0.048	12.7	4.1	0.07	12.1	2.9	1.4	1	0	0	1	1	1	0	TMPIT-like	protein
GAS	PF13851.1	gi|449067853|ref|YP_007434935.1|	-	0.049	12.8	8.1	0.12	11.5	5.6	1.7	1	1	0	1	1	1	0	Growth-arrest	specific	micro-tubule	binding
CorA	PF01544.13	gi|449067853|ref|YP_007434935.1|	-	0.051	12.6	4.0	0.031	13.2	1.5	1.5	2	0	0	2	2	1	0	CorA-like	Mg2+	transporter	protein
DUF1978	PF09321.5	gi|449067853|ref|YP_007434935.1|	-	0.052	12.9	7.5	0.12	11.7	5.2	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1978)
V_ATPase_I	PF01496.14	gi|449067853|ref|YP_007434935.1|	-	0.055	11.3	3.5	0.058	11.2	2.5	1.2	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
DUF2383	PF09537.5	gi|449067853|ref|YP_007434935.1|	-	0.057	13.6	6.3	2.8	8.2	1.1	3.0	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF2383)
TMCO5	PF14992.1	gi|449067853|ref|YP_007434935.1|	-	0.059	12.4	8.0	0.092	11.8	5.6	1.4	1	0	0	1	1	1	0	TMCO5	family
Serine_rich	PF08824.5	gi|449067853|ref|YP_007434935.1|	-	0.063	12.9	2.5	0.51	10.0	0.1	2.3	1	1	1	2	2	2	0	Serine	rich	protein	interaction	domain
HAUS-augmin3	PF14932.1	gi|449067853|ref|YP_007434935.1|	-	0.066	12.3	7.2	0.092	11.9	5.0	1.2	1	0	0	1	1	1	0	HAUS	augmin-like	complex	subunit	3
Retrotrans_gag	PF03732.12	gi|449067853|ref|YP_007434935.1|	-	0.072	13.1	0.6	1.7	8.7	0.0	2.4	1	1	1	2	2	2	0	Retrotransposon	gag	protein
PspA_IM30	PF04012.7	gi|449067853|ref|YP_007434935.1|	-	0.074	12.3	9.5	0.13	11.6	6.6	1.3	1	0	0	1	1	1	0	PspA/IM30	family
DUF2216	PF10226.4	gi|449067853|ref|YP_007434935.1|	-	0.079	12.4	4.7	0.058	12.8	1.2	2.0	1	1	1	2	2	2	0	Uncharacterized	conserved	proteins	(DUF2216)
Paramyxo_P	PF01806.12	gi|449067853|ref|YP_007434935.1|	-	0.079	12.2	5.8	1.1	8.4	0.9	2.6	2	1	1	3	3	2	0	Paramyxovirinae	P	phosphoprotein	C-terminal	region
FlgN	PF05130.7	gi|449067853|ref|YP_007434935.1|	-	0.081	13.1	10.1	0.18	12.0	6.9	1.5	1	1	0	1	1	1	0	FlgN	protein
DUF2959	PF11172.3	gi|449067853|ref|YP_007434935.1|	-	0.093	12.4	4.7	1.9	8.1	1.2	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2959)
Clusterin	PF01093.12	gi|449067853|ref|YP_007434935.1|	-	0.097	11.4	4.0	0.29	9.8	1.6	2.2	2	0	0	2	2	2	0	Clusterin
Peptidase_S46	PF10459.4	gi|449067853|ref|YP_007434935.1|	-	0.11	10.9	2.7	0.14	10.5	1.9	1.1	1	0	0	1	1	1	0	Peptidase	S46
DUF1759	PF03564.10	gi|449067853|ref|YP_007434935.1|	-	0.11	12.2	3.8	0.42	10.4	1.0	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1759)
APG6	PF04111.7	gi|449067853|ref|YP_007434935.1|	-	0.11	11.5	5.7	0.17	10.9	4.0	1.3	1	0	0	1	1	1	0	Autophagy	protein	Apg6
ALIX_LYPXL_bnd	PF13949.1	gi|449067853|ref|YP_007434935.1|	-	0.12	11.2	8.2	0.43	9.4	5.7	1.7	1	1	0	1	1	1	0	ALIX	V-shaped	domain	binding	to	HIV
COG5	PF10392.4	gi|449067853|ref|YP_007434935.1|	-	0.13	12.2	7.2	1.5	8.7	0.9	2.8	1	1	1	2	2	2	0	Golgi	transport	complex	subunit	5
MitMem_reg	PF13012.1	gi|449067853|ref|YP_007434935.1|	-	0.13	12.3	4.1	4.3	7.4	2.9	2.6	1	1	0	1	1	1	0	Maintenance	of	mitochondrial	structure	and	function
CAP_N	PF01213.14	gi|449067853|ref|YP_007434935.1|	-	0.13	11.4	1.7	0.19	10.9	1.2	1.2	1	0	0	1	1	1	0	Adenylate	cyclase	associated	(CAP)	N	terminal
FCH	PF00611.18	gi|449067853|ref|YP_007434935.1|	-	0.14	12.3	4.6	0.29	11.3	3.2	1.5	1	0	0	1	1	1	0	Fes/CIP4,	and	EFC/F-BAR	homology	domain
Prominin	PF05478.6	gi|449067853|ref|YP_007434935.1|	-	0.14	9.6	7.0	0.35	8.3	0.8	1.9	1	1	1	2	2	2	0	Prominin
DUF4279	PF14106.1	gi|449067853|ref|YP_007434935.1|	-	0.15	11.9	3.1	4.5	7.1	0.1	3.3	1	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4279)
SNARE	PF05739.14	gi|449067853|ref|YP_007434935.1|	-	0.15	11.7	8.7	1.4	8.6	0.1	3.5	1	1	2	3	3	3	0	SNARE	domain
Tropomyosin	PF00261.15	gi|449067853|ref|YP_007434935.1|	-	0.16	11.0	10.1	0.77	8.7	6.9	2.0	1	1	1	2	2	2	0	Tropomyosin
Fusion_gly	PF00523.13	gi|449067853|ref|YP_007434935.1|	-	0.16	10.0	4.2	1.9	6.4	0.4	2.2	1	1	1	2	2	2	0	Fusion	glycoprotein	F0
Cauli_AT	PF03233.8	gi|449067853|ref|YP_007434935.1|	-	0.18	11.5	8.7	0.34	10.6	2.8	2.4	1	1	1	2	2	2	0	Aphid	transmission	protein
Tweety	PF04906.8	gi|449067853|ref|YP_007434935.1|	-	0.18	10.1	2.2	0.25	9.6	1.6	1.2	1	0	0	1	1	1	0	Tweety
BDV_P24	PF06595.6	gi|449067853|ref|YP_007434935.1|	-	0.19	11.4	6.5	0.46	10.2	4.5	1.7	1	1	0	1	1	1	0	Borna	disease	virus	P24	protein
Corona_S2	PF01601.11	gi|449067853|ref|YP_007434935.1|	-	0.19	9.7	2.5	0.66	7.9	1.5	1.8	1	1	0	1	1	1	0	Coronavirus	S2	glycoprotein
Phage_GP20	PF06810.6	gi|449067853|ref|YP_007434935.1|	-	0.21	11.0	10.2	0.57	9.6	2.2	2.9	1	1	1	2	2	2	0	Phage	minor	structural	protein	GP20
Tektin	PF03148.9	gi|449067853|ref|YP_007434935.1|	-	0.29	9.6	7.7	1.8	7.0	0.4	2.2	1	1	1	2	2	2	0	Tektin	family
Vps53_N	PF04100.7	gi|449067853|ref|YP_007434935.1|	-	0.29	9.8	8.0	0.49	9.1	5.5	1.6	1	1	0	1	1	1	0	Vps53-like,	N-terminal
Mnd1	PF03962.10	gi|449067853|ref|YP_007434935.1|	-	0.3	10.7	7.9	0.6	9.7	5.2	1.7	1	1	0	1	1	1	0	Mnd1	family
Striatin	PF08232.7	gi|449067853|ref|YP_007434935.1|	-	0.33	11.2	8.6	0.54	10.5	6.0	1.3	1	0	0	1	1	1	0	Striatin	family
ISG65-75	PF11727.3	gi|449067853|ref|YP_007434935.1|	-	0.38	9.7	3.7	0.54	9.2	2.6	1.4	1	0	0	1	1	1	0	Invariant	surface	glycoprotein
DUF812	PF05667.6	gi|449067853|ref|YP_007434935.1|	-	0.38	9.2	11.4	1.9	6.9	3.2	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF812)
FliD_N	PF02465.13	gi|449067853|ref|YP_007434935.1|	-	0.38	11.1	4.1	2.6	8.4	2.4	2.3	1	1	1	2	2	2	0	Flagellar	hook-associated	protein	2	N-terminus
PhageMin_Tail	PF10145.4	gi|449067853|ref|YP_007434935.1|	-	0.4	10.3	3.2	5.4	6.5	1.4	2.4	1	1	1	2	2	2	0	Phage-related	minor	tail	protein
Spectrin	PF00435.16	gi|449067853|ref|YP_007434935.1|	-	0.42	10.9	9.0	5.9	7.2	1.6	2.3	1	1	1	2	2	2	0	Spectrin	repeat
DUF4618	PF15397.1	gi|449067853|ref|YP_007434935.1|	-	0.52	9.5	8.8	1.1	8.5	6.1	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4618)
Sec8_exocyst	PF04048.9	gi|449067853|ref|YP_007434935.1|	-	0.54	9.8	6.6	5	6.7	0.3	2.4	1	1	1	2	2	2	0	Sec8	exocyst	complex	component	specific	domain
COG2	PF06148.6	gi|449067853|ref|YP_007434935.1|	-	0.56	10.0	6.8	20	5.0	4.7	2.4	1	1	0	1	1	1	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
DUF2076	PF09849.4	gi|449067853|ref|YP_007434935.1|	-	0.56	10.2	7.2	16	5.4	5.0	2.3	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2076)
NERD	PF08378.6	gi|449067853|ref|YP_007434935.1|	-	0.59	10.4	3.2	1.3	9.3	0.1	2.6	2	1	0	2	2	2	0	Nuclease-related	domain
Seryl_tRNA_N	PF02403.17	gi|449067853|ref|YP_007434935.1|	-	0.62	10.1	11.1	3.8	7.5	7.7	2.3	1	1	0	1	1	1	0	Seryl-tRNA	synthetase	N-terminal	domain
Med4	PF10018.4	gi|449067853|ref|YP_007434935.1|	-	0.67	9.3	8.1	1.8	7.9	2.2	2.3	1	1	1	2	2	2	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
DUF1296	PF06972.6	gi|449067853|ref|YP_007434935.1|	-	0.77	9.7	4.7	18	5.3	0.3	3.6	3	1	0	4	4	2	0	Protein	of	unknown	function	(DUF1296)
DUF4559	PF15112.1	gi|449067853|ref|YP_007434935.1|	-	0.83	8.7	7.1	5.7	6.0	0.6	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4559)
Tropomyosin_1	PF12718.2	gi|449067853|ref|YP_007434935.1|	-	0.92	9.3	9.2	5.3	6.8	6.4	2.0	1	1	0	1	1	1	0	Tropomyosin	like
Syntaxin	PF00804.20	gi|449067853|ref|YP_007434935.1|	-	0.94	9.6	12.1	6.7	6.9	7.7	2.7	1	1	1	2	2	2	0	Syntaxin
Med9	PF07544.8	gi|449067853|ref|YP_007434935.1|	-	1.3	8.7	10.8	11	5.8	3.2	3.0	1	1	1	2	2	2	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
DUF972	PF06156.8	gi|449067853|ref|YP_007434935.1|	-	1.4	9.3	7.0	6.5	7.1	0.9	2.7	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF972)
DUF148	PF02520.12	gi|449067853|ref|YP_007434935.1|	-	1.4	8.6	7.3	5.2	6.8	4.0	2.4	1	1	1	2	2	2	0	Domain	of	unknown	function	DUF148
Exonuc_VII_S	PF02609.11	gi|449067853|ref|YP_007434935.1|	-	1.4	8.7	6.4	24	4.7	0.1	3.8	3	1	1	4	4	3	0	Exonuclease	VII	small	subunit
DUF641	PF04859.7	gi|449067853|ref|YP_007434935.1|	-	1.6	8.5	7.7	11	5.7	0.3	2.3	1	1	1	2	2	2	0	Plant	protein	of	unknown	function	(DUF641)
DUF4047	PF13256.1	gi|449067853|ref|YP_007434935.1|	-	1.6	8.6	9.6	0.16	11.9	2.2	2.4	3	0	0	3	3	2	0	Domain	of	unknown	function	(DUF4047)
Syntaxin-6_N	PF09177.6	gi|449067853|ref|YP_007434935.1|	-	1.6	9.1	5.1	14	6.1	3.5	2.3	1	1	0	1	1	1	0	Syntaxin	6,	N-terminal
DUF2203	PF09969.4	gi|449067853|ref|YP_007434935.1|	-	1.9	8.7	7.6	64	3.7	5.2	2.5	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2203)
Kinesin-relat_1	PF12711.2	gi|449067853|ref|YP_007434935.1|	-	1.9	8.9	6.6	1	9.8	2.1	2.5	2	1	0	2	2	1	0	Kinesin	motor
DUF848	PF05852.6	gi|449067853|ref|YP_007434935.1|	-	2.1	8.1	7.7	2.4	7.9	3.3	2.2	1	1	2	3	3	3	0	Gammaherpesvirus	protein	of	unknown	function	(DUF848)
Lge1	PF11488.3	gi|449067853|ref|YP_007434935.1|	-	2.2	8.5	5.9	13	6.0	0.2	2.6	1	1	1	2	2	2	0	Transcriptional	regulatory	protein	LGE1
DivIVA	PF05103.8	gi|449067853|ref|YP_007434935.1|	-	2.8	8.0	10.0	2.5	8.1	6.0	1.7	2	0	0	2	2	1	0	DivIVA	protein
zf-C4H2	PF10146.4	gi|449067853|ref|YP_007434935.1|	-	3	7.7	9.8	1.9	8.4	3.7	2.0	1	1	1	2	2	2	0	Zinc	finger-containing	protein
DUF904	PF06005.7	gi|449067853|ref|YP_007434935.1|	-	3.4	8.0	9.3	12	6.2	0.8	2.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF904)
XhlA	PF10779.4	gi|449067853|ref|YP_007434935.1|	-	4.2	7.3	6.7	28	4.6	0.1	2.7	1	1	1	2	2	2	0	Haemolysin	XhlA
H-kinase_dim	PF02895.9	gi|449067853|ref|YP_007434935.1|	-	4.7	7.6	9.2	1e+03	0.1	6.3	2.9	1	1	0	1	1	1	0	Signal	transducing	histidine	kinase,	homodimeric	domain
Snapin_Pallidin	PF14712.1	gi|449067853|ref|YP_007434935.1|	-	5	7.5	9.0	2e+02	2.3	6.2	2.7	1	1	0	1	1	1	0	Snapin/Pallidin
Laminin_II	PF06009.7	gi|449067853|ref|YP_007434935.1|	-	9.3	6.0	12.1	1.4	8.6	4.3	2.3	2	1	1	3	3	2	0	Laminin	Domain	II
Alpha_adaptinC2	PF02883.15	gi|449067855|ref|YP_007434937.1|	-	0.016	15.5	0.0	0.024	14.9	0.0	1.3	1	0	0	1	1	1	0	Adaptin	C-terminal	domain
Exo_endo_phos_2	PF14529.1	gi|449067855|ref|YP_007434937.1|	-	0.13	11.8	0.0	0.2	11.2	0.0	1.3	1	0	0	1	1	1	0	Endonuclease-reverse	transcriptase
Pkinase	PF00069.20	gi|449067857|ref|YP_007434939.1|	-	1.3e-28	99.8	0.0	3.5e-28	98.4	0.0	1.7	3	0	0	3	3	3	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|449067857|ref|YP_007434939.1|	-	2.5e-14	52.9	0.0	1.5e-13	50.4	0.0	2.2	1	1	0	1	1	1	1	Protein	tyrosine	kinase
Exonuc_VII_S	PF02609.11	gi|449067857|ref|YP_007434939.1|	-	0.0018	17.9	0.1	0.01	15.6	0.0	2.2	2	0	0	2	2	2	1	Exonuclease	VII	small	subunit
DEAD	PF00270.24	gi|449067861|ref|YP_007434943.1|	-	1.2e-06	28.1	0.0	6.6e-05	22.4	0.0	2.6	2	1	0	2	2	2	1	DEAD/DEAH	box	helicase
ResIII	PF04851.10	gi|449067861|ref|YP_007434943.1|	-	2e-06	27.7	0.0	7.1e-06	25.9	0.0	1.9	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.26	gi|449067861|ref|YP_007434943.1|	-	0.00027	20.7	0.1	0.00065	19.5	0.0	1.6	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
T2SE	PF00437.15	gi|449067861|ref|YP_007434943.1|	-	0.053	12.4	0.0	0.11	11.4	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
HTH_38	PF13936.1	gi|449067865|ref|YP_007434947.1|	-	0.0047	16.4	0.4	0.009	15.5	0.3	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
Syntaxin-6_N	PF09177.6	gi|449067865|ref|YP_007434947.1|	-	0.0056	17.0	0.3	0.013	15.8	0.1	1.8	2	0	0	2	2	2	1	Syntaxin	6,	N-terminal
DASH_Dad2	PF08654.5	gi|449067865|ref|YP_007434947.1|	-	0.028	14.4	0.9	0.053	13.5	0.6	1.5	1	0	0	1	1	1	0	DASH	complex	subunit	Dad2
HTH_5	PF01022.15	gi|449067865|ref|YP_007434947.1|	-	0.09	12.4	0.3	0.19	11.4	0.2	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
DASH_Duo1	PF08651.5	gi|449067865|ref|YP_007434947.1|	-	0.098	12.2	1.4	0.3	10.6	1.0	1.8	1	0	0	1	1	1	0	DASH	complex	subunit	Duo1
DASH_Dam1	PF08653.5	gi|449067865|ref|YP_007434947.1|	-	0.1	12.4	1.3	7.7	6.3	0.1	3.2	2	1	2	4	4	4	0	DASH	complex	subunit	Dam1
HTH_1	PF00126.22	gi|449067865|ref|YP_007434947.1|	-	0.13	12.0	0.0	0.22	11.3	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
FlaC_arch	PF05377.6	gi|449067865|ref|YP_007434947.1|	-	0.28	11.0	2.5	0.4	10.6	0.4	2.3	2	0	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
DUF2276	PF10040.4	gi|449067866|ref|YP_007434948.1|	-	1e-15	58.0	0.1	2.1e-15	57.0	0.1	1.5	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2276)
CRISPR_Cas2	PF09827.4	gi|449067867|ref|YP_007434949.1|	-	1.1e-15	57.4	0.3	1.5e-15	57.0	0.2	1.2	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas2
Cas_Cas2CT1978	PF09707.5	gi|449067867|ref|YP_007434949.1|	-	0.036	13.9	0.2	0.056	13.3	0.2	1.4	1	1	0	1	1	1	0	CRISPR-associated	protein	(Cas_Cas2CT1978)
ERCC4	PF02732.10	gi|449067867|ref|YP_007434949.1|	-	0.07	12.8	0.1	0.079	12.7	0.1	1.1	1	0	0	1	1	1	0	ERCC4	domain
Cas_Cas1	PF01867.11	gi|449067869|ref|YP_007434951.1|	-	2.1e-45	155.0	0.0	2.4e-45	154.8	0.0	1.0	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas1
Ribosomal_S7	PF00177.16	gi|449067870|ref|YP_007434952.1|	-	0.026	14.0	0.6	0.026	14.0	0.4	1.1	1	0	0	1	1	1	0	Ribosomal	protein	S7p/S5e
CcdA	PF07362.7	gi|449067871|ref|YP_007434953.1|	-	7.1e-06	25.8	5.4	4.7e-05	23.1	3.6	1.9	1	1	0	1	1	1	1	Post-segregation	antitoxin	CcdA
UBN_AB	PF14075.1	gi|449067871|ref|YP_007434953.1|	-	0.027	14.1	2.0	0.027	14.1	1.4	1.0	1	0	0	1	1	1	0	Ubinuclein	conserved	middle	domain
Apolipoprotein	PF01442.13	gi|449067871|ref|YP_007434953.1|	-	0.044	13.2	2.7	0.73	9.3	0.1	2.0	1	1	1	2	2	2	0	Apolipoprotein	A1/A4/E	domain
IF2_N	PF04760.10	gi|449067871|ref|YP_007434953.1|	-	0.047	13.3	0.5	1.9	8.1	0.4	2.9	1	1	0	1	1	1	0	Translation	initiation	factor	IF-2,	N-terminal	region
NAD_binding_4	PF07993.7	gi|449067871|ref|YP_007434953.1|	-	0.069	12.0	0.7	0.077	11.9	0.5	1.0	1	0	0	1	1	1	0	Male	sterility	protein
Fumerase	PF05681.9	gi|449067871|ref|YP_007434953.1|	-	0.071	12.1	0.5	0.08	12.0	0.4	1.0	1	0	0	1	1	1	0	Fumarate	hydratase	(Fumerase)
RHH_1	PF01402.16	gi|449067871|ref|YP_007434953.1|	-	0.085	12.7	6.2	0.096	12.6	2.0	2.5	1	1	1	2	2	2	0	Ribbon-helix-helix	protein,	copG	family
PSK_trans_fac	PF07704.6	gi|449067871|ref|YP_007434953.1|	-	0.087	13.5	3.4	0.11	13.2	2.4	1.3	1	0	0	1	1	1	0	Rv0623-like	transcription	factor
DUF4208	PF13907.1	gi|449067871|ref|YP_007434953.1|	-	0.11	12.7	0.4	0.17	12.0	0.2	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4208)
Tom37_C	PF11801.3	gi|449067871|ref|YP_007434953.1|	-	0.2	11.5	1.2	0.2	11.5	0.8	1.0	1	0	0	1	1	1	0	Tom37	C-terminal	domain
Ground-like	PF04155.13	gi|449067871|ref|YP_007434953.1|	-	0.23	11.7	0.7	0.36	11.1	0.2	1.5	2	0	0	2	2	2	0	Ground-like	domain
YtxH	PF12732.2	gi|449067871|ref|YP_007434953.1|	-	0.3	11.4	2.4	0.49	10.8	1.7	1.4	1	1	0	1	1	1	0	YtxH-like	protein
Phage_int_SAM_5	PF13102.1	gi|449067871|ref|YP_007434953.1|	-	0.3	11.0	2.3	0.33	10.9	1.6	1.0	1	0	0	1	1	1	0	Phage	integrase	SAM-like	domain
Ran-binding	PF05508.6	gi|449067871|ref|YP_007434953.1|	-	0.38	9.6	2.3	0.46	9.3	1.6	1.0	1	0	0	1	1	1	0	RanGTP-binding	protein
FYVE_2	PF02318.11	gi|449067871|ref|YP_007434953.1|	-	0.53	10.1	4.1	0.6	10.0	2.9	1.3	1	0	0	1	1	1	0	FYVE-type	zinc	finger
DUF1104	PF06518.6	gi|449067871|ref|YP_007434953.1|	-	0.72	10.0	4.6	2.2	8.4	2.9	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1104)
PIN	PF01850.16	gi|449067872|ref|YP_007434954.1|	-	2e-05	24.9	0.1	2.5e-05	24.5	0.1	1.1	1	0	0	1	1	1	1	PIN	domain
DUF1177	PF06675.6	gi|449067873|ref|YP_007434955.1|	-	5.8e-111	369.4	0.0	6.8e-111	369.2	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1177)
FAD_binding_4	PF01565.18	gi|449067874|ref|YP_007434956.1|	-	3.4e-27	94.6	0.0	6.2e-27	93.7	0.0	1.4	1	0	0	1	1	1	1	FAD	binding	domain
FAD-oxidase_C	PF02913.14	gi|449067874|ref|YP_007434956.1|	-	2.7e-07	30.1	0.0	9.4e-07	28.3	0.0	1.9	2	0	0	2	2	2	1	FAD	linked	oxidases,	C-terminal	domain
AAA_21	PF13304.1	gi|449067877|ref|YP_007434959.1|	-	8.5e-15	55.4	6.9	3.7e-14	53.3	4.8	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.1	gi|449067877|ref|YP_007434959.1|	-	1.3e-05	25.6	0.3	1.3e-05	25.6	0.2	1.9	2	0	0	2	2	2	1	AAA	domain
AAA_15	PF13175.1	gi|449067877|ref|YP_007434959.1|	-	0.0019	17.2	10.6	0.0041	16.2	3.7	2.9	1	1	1	2	2	2	1	AAA	ATPase	domain
DUF327	PF03885.8	gi|449067878|ref|YP_007434960.1|	-	0.049	13.4	3.1	0.053	13.3	0.5	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF327)
DUF1947	PF09183.5	gi|449067878|ref|YP_007434960.1|	-	0.16	11.7	1.5	0.19	11.5	0.1	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1947)
DUF4600	PF15372.1	gi|449067878|ref|YP_007434960.1|	-	0.72	10.0	5.9	1.6	8.9	4.1	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4600)
AAA_14	PF13173.1	gi|449067879|ref|YP_007434961.1|	-	8.7e-13	48.2	0.0	1.3e-12	47.7	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
NUMOD1	PF07453.8	gi|449067879|ref|YP_007434961.1|	-	0.0038	17.0	0.1	0.0091	15.8	0.1	1.6	1	0	0	1	1	1	1	NUMOD1	domain
HTH_24	PF13412.1	gi|449067879|ref|YP_007434961.1|	-	0.0039	16.5	0.0	0.011	15.0	0.0	1.9	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_10	PF04967.7	gi|449067879|ref|YP_007434961.1|	-	0.023	14.2	0.0	0.044	13.3	0.0	1.4	1	0	0	1	1	1	0	HTH	DNA	binding	domain
HTH_Tnp_ISL3	PF13542.1	gi|449067879|ref|YP_007434961.1|	-	0.035	13.2	0.0	0.085	12.0	0.0	1.5	1	1	0	1	1	1	0	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_11	PF08279.7	gi|449067879|ref|YP_007434961.1|	-	0.042	13.5	0.0	0.084	12.5	0.0	1.5	1	0	0	1	1	1	0	HTH	domain
HTH_Mga	PF08280.6	gi|449067879|ref|YP_007434961.1|	-	0.053	13.2	0.0	0.17	11.7	0.0	1.8	1	0	0	1	1	1	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
TFIIE_alpha	PF02002.12	gi|449067879|ref|YP_007434961.1|	-	0.085	12.3	0.1	1.1	8.8	0.0	2.3	2	0	0	2	2	2	0	TFIIE	alpha	subunit
HTH_22	PF13309.1	gi|449067879|ref|YP_007434961.1|	-	0.11	12.2	0.0	0.29	10.8	0.0	1.7	1	0	0	1	1	1	0	HTH	domain
HTH_30	PF13556.1	gi|449067879|ref|YP_007434961.1|	-	0.12	12.0	0.0	0.21	11.1	0.0	1.4	1	0	0	1	1	1	0	PucR	C-terminal	helix-turn-helix	domain
GntR	PF00392.16	gi|449067879|ref|YP_007434961.1|	-	0.13	11.6	0.0	0.28	10.6	0.0	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
Hemopexin	PF00045.14	gi|449067880|ref|YP_007434962.1|	-	0.0047	16.6	1.3	0.063	13.0	0.5	2.1	2	0	0	2	2	2	1	Hemopexin
DUF4143	PF13635.1	gi|449067880|ref|YP_007434962.1|	-	0.022	14.9	0.2	0.027	14.6	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4143)
NTP_transf_2	PF01909.18	gi|449067881|ref|YP_007434963.1|	-	0.0004	20.6	0.1	0.00065	19.9	0.0	1.5	2	0	0	2	2	2	1	Nucleotidyltransferase	domain
RAMPs	PF03787.10	gi|449067883|ref|YP_007434965.1|	-	6.9e-23	81.6	0.3	1.1e-22	80.9	0.2	1.4	1	0	0	1	1	1	1	RAMP	superfamily
Asp_protease_2	PF13650.1	gi|449067884|ref|YP_007434966.1|	-	0.021	15.2	0.0	0.034	14.6	0.0	1.5	1	1	1	2	2	2	0	Aspartyl	protease
RAMPs	PF03787.10	gi|449067885|ref|YP_007434967.1|	-	2.9e-10	40.3	0.4	5.9e-10	39.3	0.3	1.4	1	1	0	1	1	1	1	RAMP	superfamily
Poty_PP	PF08440.5	gi|449067885|ref|YP_007434967.1|	-	0.096	11.7	0.0	0.15	11.0	0.0	1.2	1	0	0	1	1	1	0	Potyviridae	polyprotein
Tachystatin_B	PF11478.3	gi|449067886|ref|YP_007434968.1|	-	0.085	12.5	0.4	0.16	11.6	0.3	1.4	1	0	0	1	1	1	0	Antimicrobial	chitin	binding	protein	tachystatin	B
Ubie_methyltran	PF01209.13	gi|449067889|ref|YP_007434971.1|	-	1.3e-22	80.1	0.6	1.8e-22	79.6	0.4	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_11	PF08241.7	gi|449067889|ref|YP_007434971.1|	-	3.7e-14	52.9	0.1	5.8e-14	52.3	0.1	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|449067889|ref|YP_007434971.1|	-	2.9e-10	40.4	0.1	7.1e-10	39.1	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|449067889|ref|YP_007434971.1|	-	2.8e-09	36.7	0.1	1e-08	34.9	0.1	1.9	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|449067889|ref|YP_007434971.1|	-	3e-08	34.0	0.0	5.6e-08	33.1	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
MetW	PF07021.7	gi|449067889|ref|YP_007434971.1|	-	1e-07	31.4	0.0	1.8e-07	30.7	0.0	1.4	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
Methyltransf_23	PF13489.1	gi|449067889|ref|YP_007434971.1|	-	1.6e-05	24.6	0.0	2.2e-05	24.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|449067889|ref|YP_007434971.1|	-	0.00027	21.4	0.0	0.0011	19.5	0.0	1.9	1	1	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|449067889|ref|YP_007434971.1|	-	0.00098	18.5	0.0	0.002	17.5	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_26	PF13659.1	gi|449067889|ref|YP_007434971.1|	-	0.0046	16.9	0.0	0.0085	16.1	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_7	PF03492.10	gi|449067889|ref|YP_007434971.1|	-	0.009	14.8	0.0	0.014	14.1	0.0	1.4	1	0	0	1	1	1	1	SAM	dependent	carboxyl	methyltransferase
PCMT	PF01135.14	gi|449067889|ref|YP_007434971.1|	-	0.021	14.3	0.0	0.036	13.6	0.0	1.4	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_8	PF05148.10	gi|449067889|ref|YP_007434971.1|	-	0.022	14.4	0.1	0.035	13.7	0.1	1.3	1	0	0	1	1	1	0	Hypothetical	methyltransferase
Methyltransf_32	PF13679.1	gi|449067889|ref|YP_007434971.1|	-	0.039	13.6	0.0	0.063	12.9	0.0	1.4	1	1	0	1	1	1	0	Methyltransferase	domain
UPF0066	PF01980.11	gi|449067891|ref|YP_007434973.1|	-	7.1e-36	122.7	0.0	8.2e-36	122.5	0.0	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0066
MFS_1	PF07690.11	gi|449067892|ref|YP_007434974.1|	-	9.4e-17	60.7	60.7	9.4e-17	60.7	42.1	1.4	1	1	0	1	1	1	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|449067892|ref|YP_007434974.1|	-	6.3e-10	38.2	19.7	6.3e-10	38.2	13.6	2.2	2	0	0	2	2	2	2	Sugar	(and	other)	transporter
Glycos_transf_1	PF00534.15	gi|449067896|ref|YP_007434978.1|	-	3.6e-38	130.6	0.2	5e-36	123.6	0.0	2.4	2	1	1	3	3	3	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|449067896|ref|YP_007434978.1|	-	3.2e-21	75.8	3.0	4.5e-21	75.3	2.1	1.2	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_1_4	PF13692.1	gi|449067896|ref|YP_007434978.1|	-	4.7e-14	52.6	0.0	9.1e-14	51.7	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|449067896|ref|YP_007434978.1|	-	1.7e-07	31.3	0.0	1.1e-06	28.8	0.0	2.2	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.1	gi|449067896|ref|YP_007434978.1|	-	0.0001	22.4	0.0	0.0012	19.0	0.0	2.0	1	1	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Epimerase_2	PF02350.14	gi|449067896|ref|YP_007434978.1|	-	0.004	15.9	0.2	0.014	14.1	0.1	1.7	1	1	1	2	2	2	1	UDP-N-acetylglucosamine	2-epimerase
Glyco_trans_4_2	PF13477.1	gi|449067896|ref|YP_007434978.1|	-	1.6	8.5	8.3	1.4	8.7	1.4	2.9	1	1	2	3	3	3	0	Glycosyl	transferase	4-like
Glycos_transf_2	PF00535.21	gi|449067898|ref|YP_007434980.1|	-	1.7e-20	73.4	0.2	2.4e-20	72.8	0.1	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.4	gi|449067898|ref|YP_007434980.1|	-	1e-06	28.0	0.1	1.5e-06	27.4	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_3	PF13641.1	gi|449067898|ref|YP_007434980.1|	-	3.5e-05	23.7	0.0	5.9e-05	22.9	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.1	gi|449067898|ref|YP_007434980.1|	-	0.035	14.4	0.0	0.064	13.5	0.0	1.5	1	1	0	1	1	1	0	Glycosyl	transferase	family	2
DUF4480	PF13715.1	gi|449067899|ref|YP_007434981.1|	-	0.0036	17.3	0.5	0.014	15.4	0.2	2.1	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4480)
Glycos_transf_2	PF00535.21	gi|449067900|ref|YP_007434982.1|	-	2.8e-08	33.6	0.1	4.8e-08	32.8	0.1	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glycos_transf_1	PF00534.15	gi|449067903|ref|YP_007434985.1|	-	7.8e-15	54.7	0.0	1.8e-14	53.4	0.0	1.7	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|449067903|ref|YP_007434985.1|	-	3e-06	27.4	0.0	5.7e-06	26.5	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|449067903|ref|YP_007434985.1|	-	0.00033	20.4	0.0	0.00082	19.1	0.0	1.8	1	1	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_4_2	PF13477.1	gi|449067903|ref|YP_007434985.1|	-	0.0014	18.4	0.0	0.0034	17.2	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferase	4-like
Glyco_trans_1_2	PF13524.1	gi|449067903|ref|YP_007434985.1|	-	0.07	13.4	0.0	0.19	12.0	0.0	1.7	1	0	0	1	1	1	0	Glycosyl	transferases	group	1
Glycos_transf_2	PF00535.21	gi|449067904|ref|YP_007434986.1|	-	7.1e-15	55.0	1.1	1.4e-14	54.1	0.8	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|449067904|ref|YP_007434986.1|	-	9.9e-06	25.5	0.0	1.7e-05	24.7	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.4	gi|449067904|ref|YP_007434986.1|	-	0.004	16.2	0.7	0.004	16.2	0.5	1.7	2	0	0	2	2	2	1	Glycosyltransferase	like	family	2
Glycos_transf_1	PF00534.15	gi|449067905|ref|YP_007434987.1|	-	1.8e-21	76.3	0.0	3.3e-21	75.4	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|449067905|ref|YP_007434987.1|	-	4.8e-10	39.7	0.0	1e-09	38.6	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
NDUF_B12	PF08122.7	gi|449067906|ref|YP_007434988.1|	-	0.068	12.9	1.2	1.6	8.5	0.6	2.7	2	0	0	2	2	2	0	NADH-ubiquinone	oxidoreductase	B12	subunit	family
Methyltransf_21	PF05050.7	gi|449067907|ref|YP_007434989.1|	-	3.7e-12	46.4	0.4	3.2e-11	43.4	0.3	2.0	1	1	0	1	1	1	1	Methyltransferase	FkbM	domain
Methyltransf_18	PF12847.2	gi|449067907|ref|YP_007434989.1|	-	1.1e-09	38.8	0.0	1.8e-09	38.1	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Met_10	PF02475.11	gi|449067907|ref|YP_007434989.1|	-	4e-06	26.5	0.1	6.7e-06	25.8	0.1	1.4	1	0	0	1	1	1	1	Met-10+	like-protein
PrmA	PF06325.8	gi|449067907|ref|YP_007434989.1|	-	3.4e-05	23.0	0.1	5e-05	22.5	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Cons_hypoth95	PF03602.10	gi|449067907|ref|YP_007434989.1|	-	0.032	13.6	0.0	0.048	13.0	0.0	1.2	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
HMA	PF00403.21	gi|449067907|ref|YP_007434989.1|	-	0.13	12.4	2.2	0.59	10.3	0.0	3.0	2	2	2	4	4	4	0	Heavy-metal-associated	domain
DUF2079	PF09852.4	gi|449067908|ref|YP_007434990.1|	-	2e-85	287.1	41.1	2.5e-85	286.8	28.5	1.1	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2079)
DUF2079	PF09852.4	gi|449067909|ref|YP_007434991.1|	-	3.7e-87	292.9	43.1	4.8e-87	292.5	29.9	1.1	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2079)
Glycos_transf_1	PF00534.15	gi|449067912|ref|YP_007434994.1|	-	1.9e-21	76.2	0.3	3.5e-21	75.3	0.2	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|449067912|ref|YP_007434994.1|	-	6.6e-12	45.5	0.0	1.3e-11	44.5	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|449067912|ref|YP_007434994.1|	-	1.6e-11	44.5	0.0	3.7e-11	43.3	0.0	1.7	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.1	gi|449067912|ref|YP_007434994.1|	-	0.02	15.0	0.0	0.036	14.1	0.0	1.4	1	1	0	1	1	1	0	Glycosyl	transferase	4-like	domain
Clathrin-link	PF09268.5	gi|449067912|ref|YP_007434994.1|	-	0.045	12.8	0.3	0.95	8.5	0.3	2.5	2	0	0	2	2	2	0	Clathrin,	heavy-chain	linker
Glyco_transf_4	PF13439.1	gi|449067912|ref|YP_007434994.1|	-	0.06	13.0	0.0	0.16	11.6	0.0	1.7	1	0	0	1	1	1	0	Glycosyltransferase	Family	4
DUF3798	PF12683.2	gi|449067912|ref|YP_007434994.1|	-	0.098	11.7	0.1	0.16	11.0	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3798)
Glycos_transf_1	PF00534.15	gi|449067913|ref|YP_007434995.1|	-	7e-17	61.3	1.7	8.1e-17	61.1	0.2	1.8	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|449067913|ref|YP_007434995.1|	-	1e-09	38.6	0.0	3.1e-09	37.0	0.0	1.8	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glycos_transf_1	PF00534.15	gi|449067914|ref|YP_007434996.1|	-	8.9e-18	64.2	0.1	1.8e-17	63.3	0.1	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|449067914|ref|YP_007434996.1|	-	4.9e-08	33.1	0.0	5.3e-06	26.6	0.0	2.2	2	0	0	2	2	2	2	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|449067914|ref|YP_007434996.1|	-	0.025	14.8	0.0	0.053	13.8	0.0	1.5	1	0	0	1	1	1	0	Glycosyl	transferases	group	1
DpnD-PcfM	PF14207.1	gi|449067918|ref|YP_007435000.1|	-	0.057	13.1	0.1	0.84	9.4	0.0	2.0	2	0	0	2	2	2	0	DpnD/PcfM-like	protein
Phosphodiest	PF01663.17	gi|449067919|ref|YP_007435001.1|	-	0.0002	20.7	0.1	0.00023	20.6	0.1	1.0	1	0	0	1	1	1	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
Sulfatase	PF00884.18	gi|449067919|ref|YP_007435001.1|	-	0.00022	20.5	0.0	0.00023	20.4	0.0	1.0	1	0	0	1	1	1	1	Sulfatase
PAPS_reduct	PF01507.14	gi|449067920|ref|YP_007435002.1|	-	2.3e-21	76.3	0.0	4.1e-21	75.5	0.0	1.4	1	1	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
Thioredoxin_6	PF13848.1	gi|449067921|ref|YP_007435003.1|	-	3.6e-07	30.1	1.6	0.015	15.1	0.1	2.1	1	1	0	2	2	2	2	Thioredoxin-like	domain
E3_UbLigase_EDD	PF11547.3	gi|449067921|ref|YP_007435003.1|	-	0.0038	16.7	0.3	2.6	7.6	0.0	2.5	2	0	0	2	2	2	2	E3	ubiquitin	ligase	EDD
AsnC_trans_reg	PF01037.16	gi|449067921|ref|YP_007435003.1|	-	0.008	15.8	0.4	0.093	12.4	0.0	2.1	2	0	0	2	2	2	1	AsnC	family
Arm_2	PF04826.8	gi|449067921|ref|YP_007435003.1|	-	0.014	14.5	0.0	4.1	6.4	0.0	2.2	2	0	0	2	2	2	0	Armadillo-like
DUF3567	PF12091.3	gi|449067921|ref|YP_007435003.1|	-	0.13	12.3	0.2	4.9	7.1	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3567)
HEPN	PF05168.9	gi|449067922|ref|YP_007435004.1|	-	1e-09	38.2	0.3	1.2e-09	38.0	0.2	1.0	1	0	0	1	1	1	1	HEPN	domain
DUF2089	PF09862.4	gi|449067922|ref|YP_007435004.1|	-	0.057	13.2	0.0	0.088	12.6	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2089)
AAA_14	PF13173.1	gi|449067924|ref|YP_007435006.1|	-	8.9e-29	99.9	1.6	2e-28	98.8	0.2	2.1	2	0	0	2	2	2	1	AAA	domain
DUF4143	PF13635.1	gi|449067924|ref|YP_007435006.1|	-	2.8e-11	43.4	0.2	5e-11	42.6	0.1	1.7	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
AAA_28	PF13521.1	gi|449067924|ref|YP_007435006.1|	-	0.0065	16.4	0.1	0.19	11.6	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
DUF2435	PF10363.4	gi|449067924|ref|YP_007435006.1|	-	0.032	14.1	0.1	0.24	11.3	0.0	2.3	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2435)
Arch_ATPase	PF01637.13	gi|449067924|ref|YP_007435006.1|	-	0.037	13.7	9.5	0.15	11.7	0.1	3.6	2	1	2	4	4	4	0	Archaeal	ATPase
T2SE	PF00437.15	gi|449067924|ref|YP_007435006.1|	-	0.084	11.7	0.0	0.13	11.0	0.0	1.2	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
DUF217	PF02697.9	gi|449067928|ref|YP_007435010.1|	-	0.057	13.6	0.6	0.063	13.5	0.4	1.0	1	0	0	1	1	1	0	Uncharacterized	ACR,	COG1753
Pyr_redox_2	PF07992.9	gi|449067932|ref|YP_007435014.1|	-	8.4e-16	58.4	0.0	4.7e-14	52.7	0.0	2.2	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|449067932|ref|YP_007435014.1|	-	1.4e-14	54.2	3.5	2.1e-13	50.4	0.9	2.5	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|449067932|ref|YP_007435014.1|	-	2.3e-08	34.3	0.2	6.7e-08	32.8	0.0	1.9	2	1	1	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
K_oxygenase	PF13434.1	gi|449067932|ref|YP_007435014.1|	-	0.00034	19.6	0.0	0.00066	18.7	0.0	1.4	1	0	0	1	1	1	1	L-lysine	6-monooxygenase	(NADPH-requiring)
DAO	PF01266.19	gi|449067932|ref|YP_007435014.1|	-	0.0013	17.7	8.2	1.2	7.9	0.0	4.1	3	1	1	4	4	4	2	FAD	dependent	oxidoreductase
NAD_binding_9	PF13454.1	gi|449067932|ref|YP_007435014.1|	-	0.043	13.5	1.0	2.1	8.0	0.0	3.1	3	0	0	3	3	3	0	FAD-NAD(P)-binding
HycI	PF01750.13	gi|449067932|ref|YP_007435014.1|	-	0.047	13.2	0.2	12	5.4	0.0	2.5	2	0	0	2	2	2	0	Hydrogenase	maturation	protease
HI0933_like	PF03486.9	gi|449067932|ref|YP_007435014.1|	-	0.28	9.6	2.6	2.5	6.4	0.3	3.1	3	1	0	4	4	4	0	HI0933-like	protein
TPP_enzyme_N	PF02776.13	gi|449067933|ref|YP_007435015.1|	-	5.1e-48	162.8	0.0	1.8e-46	157.7	0.0	2.2	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|449067933|ref|YP_007435015.1|	-	1.6e-40	138.2	1.6	4e-40	136.8	0.0	2.3	2	1	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.17	gi|449067933|ref|YP_007435015.1|	-	4.4e-26	91.2	0.0	8.2e-26	90.3	0.0	1.4	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
POR_N	PF01855.14	gi|449067933|ref|YP_007435015.1|	-	0.0022	17.5	0.0	0.0045	16.5	0.0	1.5	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Methyltrn_RNA_4	PF09936.4	gi|449067933|ref|YP_007435015.1|	-	0.1	12.0	0.0	0.35	10.3	0.0	1.8	2	0	0	2	2	2	0	SAM-dependent	RNA	methyltransferase
DUF2225	PF09986.4	gi|449067934|ref|YP_007435016.1|	-	0.069	12.6	0.1	0.086	12.2	0.1	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2225)
PYNP_C	PF07831.8	gi|449067934|ref|YP_007435016.1|	-	0.16	11.4	0.6	16	5.0	0.1	2.6	2	1	1	3	3	3	0	Pyrimidine	nucleoside	phosphorylase	C-terminal	domain
PIN	PF01850.16	gi|449067935|ref|YP_007435017.1|	-	1e-10	41.9	0.0	1.3e-10	41.6	0.0	1.1	1	0	0	1	1	1	1	PIN	domain
Aldedh	PF00171.17	gi|449067936|ref|YP_007435018.1|	-	1.2e-160	534.8	0.0	1.4e-160	534.6	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
LuxC	PF05893.9	gi|449067936|ref|YP_007435018.1|	-	0.00022	20.0	0.0	0.0031	16.2	0.0	2.4	3	1	0	3	3	3	1	Acyl-CoA	reductase	(LuxC)
Peptidase_M19	PF01244.16	gi|449067936|ref|YP_007435018.1|	-	0.11	11.3	0.0	0.19	10.6	0.0	1.3	1	0	0	1	1	1	0	Membrane	dipeptidase	(Peptidase	family	M19)
FAA_hydrolase	PF01557.13	gi|449067937|ref|YP_007435019.1|	-	3.6e-32	111.5	0.0	5.8e-32	110.9	0.0	1.4	2	0	0	2	2	2	1	Fumarylacetoacetate	(FAA)	hydrolase	family
Abhydrolase_6	PF12697.2	gi|449067938|ref|YP_007435020.1|	-	2.1e-08	34.3	0.0	2.3e-08	34.2	0.0	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|449067938|ref|YP_007435020.1|	-	3.8e-05	23.3	0.0	4.5e-05	23.1	0.0	1.2	1	0	0	1	1	1	1	alpha/beta	hydrolase	fold
Abhydrolase_5	PF12695.2	gi|449067938|ref|YP_007435020.1|	-	0.0023	17.6	0.0	0.0032	17.2	0.0	1.3	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
OrfB_Zn_ribbon	PF07282.6	gi|449067939|ref|YP_007435021.1|	-	1.3e-17	63.1	0.0	2.3e-17	62.3	0.0	1.4	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Abhydrolase_6	PF12697.2	gi|449067940|ref|YP_007435022.1|	-	1.9e-20	73.7	0.0	2.2e-20	73.5	0.0	1.0	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|449067940|ref|YP_007435022.1|	-	1.3e-12	47.8	0.0	1.6e-12	47.5	0.0	1.1	1	0	0	1	1	1	1	alpha/beta	hydrolase	fold
Abhydrolase_5	PF12695.2	gi|449067940|ref|YP_007435022.1|	-	4.2e-11	42.8	0.0	5.1e-11	42.5	0.0	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Hydrolase_4	PF12146.3	gi|449067940|ref|YP_007435022.1|	-	5.8e-08	32.4	0.0	7.9e-08	32.0	0.0	1.3	1	0	0	1	1	1	1	Putative	lysophospholipase
Thioesterase	PF00975.15	gi|449067940|ref|YP_007435022.1|	-	3.1e-05	24.3	0.0	4e-05	23.9	0.0	1.1	1	0	0	1	1	1	1	Thioesterase	domain
Lipase_3	PF01764.20	gi|449067940|ref|YP_007435022.1|	-	0.00012	21.7	0.0	0.00016	21.2	0.0	1.2	1	1	0	1	1	1	1	Lipase	(class	3)
PGAP1	PF07819.8	gi|449067940|ref|YP_007435022.1|	-	0.00057	19.5	0.0	0.0012	18.5	0.0	1.5	2	0	0	2	2	2	1	PGAP1-like	protein
Peptidase_S9	PF00326.16	gi|449067940|ref|YP_007435022.1|	-	0.00075	18.7	0.0	0.0012	18.0	0.0	1.3	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
Esterase	PF00756.15	gi|449067940|ref|YP_007435022.1|	-	0.00078	18.9	0.0	0.00093	18.6	0.0	1.2	1	0	0	1	1	1	1	Putative	esterase
Abhydrolase_2	PF02230.11	gi|449067940|ref|YP_007435022.1|	-	0.003	17.0	0.0	0.0044	16.4	0.0	1.3	1	0	0	1	1	1	1	Phospholipase/Carboxylesterase
Abhydrolase_3	PF07859.8	gi|449067940|ref|YP_007435022.1|	-	0.0033	17.0	0.0	0.0034	16.9	0.0	1.2	1	1	0	1	1	1	1	alpha/beta	hydrolase	fold
DUF1057	PF06342.7	gi|449067940|ref|YP_007435022.1|	-	0.0039	16.0	0.1	0.0063	15.3	0.0	1.4	1	1	0	1	1	1	1	Alpha/beta	hydrolase	of	unknown	function	(DUF1057)
DUF915	PF06028.6	gi|449067940|ref|YP_007435022.1|	-	0.016	14.3	0.0	0.022	13.8	0.0	1.2	1	0	0	1	1	1	0	Alpha/beta	hydrolase	of	unknown	function	(DUF915)
PAF-AH_p_II	PF03403.8	gi|449067940|ref|YP_007435022.1|	-	0.03	12.6	0.0	0.088	11.0	0.0	1.7	2	0	0	2	2	2	0	Platelet-activating	factor	acetylhydrolase,	isoform	II
Peptidase_S15	PF02129.13	gi|449067940|ref|YP_007435022.1|	-	0.039	13.3	0.0	0.05	13.0	0.0	1.3	1	1	0	1	1	1	0	X-Pro	dipeptidyl-peptidase	(S15	family)
DUF676	PF05057.9	gi|449067940|ref|YP_007435022.1|	-	0.092	12.0	0.0	0.1	11.8	0.0	1.2	1	1	0	1	1	1	0	Putative	serine	esterase	(DUF676)
DUF2305	PF10230.4	gi|449067940|ref|YP_007435022.1|	-	0.11	11.8	0.0	0.14	11.5	0.0	1.1	1	0	0	1	1	1	0	Uncharacterised	conserved	protein	(DUF2305)
DUF1749	PF08538.5	gi|449067940|ref|YP_007435022.1|	-	0.11	11.3	0.0	0.16	10.8	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1749)
Chlorophyllase	PF07224.6	gi|449067940|ref|YP_007435022.1|	-	0.13	10.9	0.0	0.14	10.9	0.0	1.1	1	0	0	1	1	1	0	Chlorophyllase
OmpH	PF03938.9	gi|449067941|ref|YP_007435023.1|	-	3.7e-05	23.7	4.8	4.3e-05	23.5	3.3	1.2	1	0	0	1	1	1	1	Outer	membrane	protein	(OmpH-like)
DUF1043	PF06295.7	gi|449067941|ref|YP_007435023.1|	-	6.2e-05	22.6	3.2	9.4e-05	22.0	2.2	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1043)
DUF1980	PF09323.5	gi|449067941|ref|YP_007435023.1|	-	0.0004	20.1	1.8	0.00072	19.3	1.2	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1980)
CENP-Q	PF13094.1	gi|449067941|ref|YP_007435023.1|	-	0.0007	19.6	1.2	0.00085	19.3	0.9	1.1	1	0	0	1	1	1	1	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
DUF342	PF03961.8	gi|449067941|ref|YP_007435023.1|	-	0.0012	17.3	0.4	0.0015	17.0	0.3	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF342)
Halogen_Hydrol	PF10112.4	gi|449067941|ref|YP_007435023.1|	-	0.0019	17.6	0.4	0.0025	17.2	0.3	1.1	1	0	0	1	1	1	1	5-bromo-4-chloroindolyl	phosphate	hydrolysis	protein
DUF3186	PF11382.3	gi|449067941|ref|YP_007435023.1|	-	0.004	16.3	6.2	0.074	12.1	4.3	2.1	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF3186)
RteC	PF09357.5	gi|449067941|ref|YP_007435023.1|	-	0.0042	16.9	5.6	0.005	16.7	3.9	1.1	1	0	0	1	1	1	1	RteC	protein
DUF3450	PF11932.3	gi|449067941|ref|YP_007435023.1|	-	0.008	15.4	7.7	0.01	15.0	5.3	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3450)
Tropomyosin_1	PF12718.2	gi|449067941|ref|YP_007435023.1|	-	0.011	15.6	8.4	0.015	15.1	5.8	1.1	1	0	0	1	1	1	0	Tropomyosin	like
Shisa	PF13908.1	gi|449067941|ref|YP_007435023.1|	-	0.016	15.4	3.3	0.018	15.1	1.7	1.6	2	0	0	2	2	1	0	Wnt	and	FGF	inhibitory	regulator
Rab5-bind	PF09311.6	gi|449067941|ref|YP_007435023.1|	-	0.017	15.0	13.1	0.024	14.5	9.1	1.1	1	0	0	1	1	1	0	Rabaptin-like	protein
BicD	PF09730.4	gi|449067941|ref|YP_007435023.1|	-	0.025	12.9	4.7	0.032	12.6	3.3	1.0	1	0	0	1	1	1	0	Microtubule-associated	protein	Bicaudal-D
PAD_porph	PF04371.10	gi|449067941|ref|YP_007435023.1|	-	0.027	13.5	1.9	0.048	12.7	1.3	1.3	1	0	0	1	1	1	0	Porphyromonas-type	peptidyl-arginine	deiminase
CENP-F_leu_zip	PF10473.4	gi|449067941|ref|YP_007435023.1|	-	0.028	14.2	4.1	0.037	13.8	2.9	1.1	1	0	0	1	1	1	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
THOC7	PF05615.8	gi|449067941|ref|YP_007435023.1|	-	0.028	14.6	8.7	0.043	14.0	6.0	1.2	1	0	0	1	1	1	0	Tho	complex	subunit	7
MAD	PF05557.8	gi|449067941|ref|YP_007435023.1|	-	0.075	11.1	6.8	0.092	10.8	4.7	1.0	1	0	0	1	1	1	0	Mitotic	checkpoint	protein
Tropomyosin	PF00261.15	gi|449067941|ref|YP_007435023.1|	-	0.097	11.7	2.2	0.13	11.3	1.5	1.1	1	0	0	1	1	1	0	Tropomyosin
FadA	PF09403.5	gi|449067941|ref|YP_007435023.1|	-	0.11	12.5	7.7	0.17	11.9	5.3	1.2	1	0	0	1	1	1	0	Adhesion	protein	FadA
GrpE	PF01025.14	gi|449067941|ref|YP_007435023.1|	-	0.14	11.6	3.5	0.21	11.0	2.4	1.2	1	0	0	1	1	1	0	GrpE
Tetraspannin	PF00335.15	gi|449067941|ref|YP_007435023.1|	-	0.16	11.2	4.0	0.22	10.7	2.7	1.4	1	0	0	1	1	1	0	Tetraspanin	family
FlxA	PF14282.1	gi|449067941|ref|YP_007435023.1|	-	0.17	11.8	19.5	0.27	11.1	13.5	1.3	1	0	0	1	1	1	0	FlxA-like	protein
XPG_I_2	PF12813.2	gi|449067941|ref|YP_007435023.1|	-	0.17	11.3	4.0	0.22	10.9	2.8	1.1	1	0	0	1	1	1	0	XPG	domain	containing
APG6	PF04111.7	gi|449067941|ref|YP_007435023.1|	-	0.24	10.3	9.2	0.33	9.9	6.3	1.1	1	0	0	1	1	1	0	Autophagy	protein	Apg6
Exonuc_VII_L	PF02601.10	gi|449067941|ref|YP_007435023.1|	-	0.26	10.4	3.5	0.31	10.1	2.4	1.1	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
BLOC1_2	PF10046.4	gi|449067941|ref|YP_007435023.1|	-	0.37	10.9	8.3	0.61	10.2	5.8	1.3	1	0	0	1	1	1	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Prefoldin	PF02996.12	gi|449067941|ref|YP_007435023.1|	-	0.39	10.3	9.5	0.7	9.5	6.6	1.5	1	0	0	1	1	1	0	Prefoldin	subunit
HR1	PF02185.11	gi|449067941|ref|YP_007435023.1|	-	0.45	10.3	10.1	0.73	9.6	2.5	2.2	1	1	1	2	2	2	0	Hr1	repeat
TMF_TATA_bd	PF12325.3	gi|449067941|ref|YP_007435023.1|	-	0.52	10.0	11.0	1.5	8.5	1.1	2.1	1	1	1	2	2	2	0	TATA	element	modulatory	factor	1	TATA	binding
Spc24	PF08286.6	gi|449067941|ref|YP_007435023.1|	-	0.56	9.9	7.7	0.7	9.6	4.9	1.5	1	1	0	1	1	1	0	Spc24	subunit	of	Ndc80
IFT57	PF10498.4	gi|449067941|ref|YP_007435023.1|	-	0.89	8.2	13.2	1.2	7.8	9.2	1.1	1	0	0	1	1	1	0	Intra-flagellar	transport	protein	57
HJURP_C	PF12347.3	gi|449067941|ref|YP_007435023.1|	-	1.2	8.7	7.7	0.84	9.2	0.1	2.3	1	1	1	2	2	2	0	Holliday	junction	regulator	protein	family	C-terminal	repeat
DUF4140	PF13600.1	gi|449067941|ref|YP_007435023.1|	-	1.2	9.6	5.2	6	7.3	3.6	2.0	1	1	0	1	1	1	0	N-terminal	domain	of	unknown	function	(DUF4140)
DivIVA	PF05103.8	gi|449067941|ref|YP_007435023.1|	-	1.4	8.9	14.0	1.5	8.8	2.5	2.1	1	1	1	2	2	2	0	DivIVA	protein
DUF4407	PF14362.1	gi|449067941|ref|YP_007435023.1|	-	1.6	7.5	11.8	3.5	6.5	8.1	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
DUF2959	PF11172.3	gi|449067941|ref|YP_007435023.1|	-	1.7	8.3	9.3	25	4.5	5.8	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2959)
ABC2_membrane_3	PF12698.2	gi|449067941|ref|YP_007435023.1|	-	1.7	7.5	15.1	3.1	6.7	9.6	1.9	1	1	1	2	2	2	0	ABC-2	family	transporter	protein
EAP30	PF04157.11	gi|449067941|ref|YP_007435023.1|	-	1.9	7.5	7.5	2.6	7.1	5.2	1.2	1	0	0	1	1	1	0	EAP30/Vps36	family
DUF745	PF05335.8	gi|449067941|ref|YP_007435023.1|	-	2.5	7.5	6.1	3.4	7.1	4.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF745)
Golgin_A5	PF09787.4	gi|449067941|ref|YP_007435023.1|	-	2.6	6.4	12.9	3.4	6.0	8.9	1.0	1	0	0	1	1	1	0	Golgin	subfamily	A	member	5
M	PF02370.11	gi|449067941|ref|YP_007435023.1|	-	2.8	8.5	14.0	9.5	6.9	2.2	2.5	2	0	0	2	2	2	0	M	protein	repeat
Prefoldin_2	PF01920.15	gi|449067941|ref|YP_007435023.1|	-	5	6.9	22.4	2.2	8.0	5.0	2.1	1	1	1	2	2	2	0	Prefoldin	subunit
OEP	PF02321.13	gi|449067941|ref|YP_007435023.1|	-	6.7	6.2	24.4	18	4.8	16.9	1.6	1	1	0	1	1	1	0	Outer	membrane	efflux	protein
YlqD	PF11068.3	gi|449067941|ref|YP_007435023.1|	-	6.8	6.7	13.2	9.9	6.2	9.1	1.2	1	0	0	1	1	1	0	YlqD	protein
Sugar_tr	PF00083.19	gi|449067942|ref|YP_007435024.1|	-	7.8e-82	275.2	27.7	9.5e-82	274.9	19.2	1.1	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|449067942|ref|YP_007435024.1|	-	2.4e-22	79.1	35.3	2.4e-22	79.1	24.5	1.9	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Gly-zipper_YMGG	PF13441.1	gi|449067942|ref|YP_007435024.1|	-	8.1	6.0	11.1	1.4	8.4	3.1	3.1	2	1	0	2	2	2	0	YMGG-like	Gly-zipper
Grp1_Fun34_YaaH	PF01184.14	gi|449067943|ref|YP_007435025.1|	-	4e-49	166.7	25.9	4.9e-49	166.4	17.9	1.1	1	0	0	1	1	1	1	GPR1/FUN34/yaaH	family
PIN	PF01850.16	gi|449067944|ref|YP_007435026.1|	-	1.2e-06	28.8	0.3	1.5e-06	28.4	0.2	1.2	1	0	0	1	1	1	1	PIN	domain
DUF4576	PF15144.1	gi|449067944|ref|YP_007435026.1|	-	0.016	14.7	0.0	0.023	14.3	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4576)
UME	PF08064.8	gi|449067945|ref|YP_007435027.1|	-	0.14	12.1	0.1	0.17	11.8	0.1	1.1	1	0	0	1	1	1	0	UME	(NUC010)	domain
DUF1323	PF07037.6	gi|449067946|ref|YP_007435028.1|	-	0.075	13.2	0.8	1.9	8.7	0.2	2.0	1	1	1	2	2	2	0	Putative	transcription	regulator	(DUF1323)
DUF1682	PF07946.9	gi|449067946|ref|YP_007435028.1|	-	0.22	10.3	6.6	0.22	10.3	4.6	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1682)
HNF-1_N	PF04814.8	gi|449067946|ref|YP_007435028.1|	-	0.31	11.1	2.1	1.1	9.3	1.5	1.7	1	1	0	1	1	1	0	Hepatocyte	nuclear	factor	1	(HNF-1),	N	terminus
GnsAB	PF08178.6	gi|449067946|ref|YP_007435028.1|	-	0.34	10.5	5.9	0.46	10.1	3.3	1.8	1	1	1	2	2	2	0	GnsA/GnsB	family
DUF1451	PF07295.6	gi|449067947|ref|YP_007435029.1|	-	0.052	13.3	0.1	0.055	13.2	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1451)
Sugar_tr	PF00083.19	gi|449067948|ref|YP_007435030.1|	-	3.6e-17	62.1	35.1	1.2e-16	60.3	8.2	2.2	1	1	0	2	2	2	2	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|449067948|ref|YP_007435030.1|	-	2.1e-14	53.0	41.6	2.1e-14	53.0	28.8	1.9	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
MFS_2	PF13347.1	gi|449067948|ref|YP_007435030.1|	-	0.004	15.6	36.0	0.027	12.8	7.9	2.5	2	1	0	2	2	2	2	MFS/sugar	transport	protein
PaREP1	PF05942.6	gi|449067949|ref|YP_007435031.1|	-	7.9e-24	83.7	0.0	1.1e-23	83.2	0.0	1.2	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
DUF29	PF01724.11	gi|449067949|ref|YP_007435031.1|	-	0.00091	19.0	0.5	0.0018	18.1	0.1	1.6	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF29
Microcin	PF03526.8	gi|449067950|ref|YP_007435032.1|	-	0.083	12.4	0.9	0.2	11.2	0.6	1.6	1	0	0	1	1	1	0	Colicin	E1	(microcin)	immunity	protein
RHH_1	PF01402.16	gi|449067951|ref|YP_007435033.1|	-	0.00032	20.4	0.4	0.0034	17.2	0.0	2.2	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
DUF2191	PF09957.4	gi|449067951|ref|YP_007435033.1|	-	0.1	12.4	0.0	0.18	11.6	0.0	1.5	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2191)
PIN	PF01850.16	gi|449067952|ref|YP_007435034.1|	-	1.6e-17	63.9	1.8	1.8e-17	63.7	1.2	1.0	1	0	0	1	1	1	1	PIN	domain
PIN_3	PF13470.1	gi|449067952|ref|YP_007435034.1|	-	0.0069	17.0	0.4	0.0091	16.6	0.3	1.3	1	1	0	1	1	1	1	PIN	domain
PIN	PF01850.16	gi|449067953|ref|YP_007435035.1|	-	1.7e-19	70.3	1.6	1.9e-19	70.1	1.1	1.0	1	0	0	1	1	1	1	PIN	domain
PIN_4	PF13638.1	gi|449067953|ref|YP_007435035.1|	-	0.004	17.2	0.4	0.0074	16.3	0.3	1.7	1	1	0	1	1	1	1	PIN	domain
Antitoxin-MazE	PF04014.13	gi|449067954|ref|YP_007435036.1|	-	1e-14	53.8	0.3	1.6e-14	53.2	0.2	1.3	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
DUF3006	PF11213.3	gi|449067954|ref|YP_007435036.1|	-	0.0022	17.6	0.1	0.0028	17.3	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3006)
SH3_2	PF07653.12	gi|449067954|ref|YP_007435036.1|	-	0.098	12.1	0.1	0.11	12.0	0.0	1.2	1	0	0	1	1	1	0	Variant	SH3	domain
MarR	PF01047.17	gi|449067955|ref|YP_007435037.1|	-	1.9e-10	40.2	0.4	7.7e-10	38.3	0.0	2.2	2	0	0	2	2	2	1	MarR	family
MarR_2	PF12802.2	gi|449067955|ref|YP_007435037.1|	-	6.7e-10	38.4	0.3	1.4e-09	37.5	0.2	1.7	1	1	0	1	1	1	1	MarR	family
HTH_27	PF13463.1	gi|449067955|ref|YP_007435037.1|	-	6.7e-10	39.1	0.0	1.4e-09	38.1	0.0	1.6	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_24	PF13412.1	gi|449067955|ref|YP_007435037.1|	-	7.9e-06	25.1	0.1	6.6e-05	22.2	0.0	2.4	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
Fe_dep_repress	PF01325.14	gi|449067955|ref|YP_007435037.1|	-	0.00013	21.8	0.0	0.00028	20.7	0.0	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
GntR	PF00392.16	gi|449067955|ref|YP_007435037.1|	-	0.00024	20.4	1.1	0.0021	17.4	0.0	2.3	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	gntR	family
HTH_34	PF13601.1	gi|449067955|ref|YP_007435037.1|	-	0.00063	19.7	0.0	0.0013	18.7	0.0	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
DUF3116	PF11313.3	gi|449067955|ref|YP_007435037.1|	-	0.00086	18.8	0.1	0.002	17.6	0.0	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3116)
HTH_20	PF12840.2	gi|449067955|ref|YP_007435037.1|	-	0.0027	17.4	0.5	0.012	15.3	0.0	2.3	3	0	0	3	3	3	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|449067955|ref|YP_007435037.1|	-	0.0038	16.9	0.9	0.019	14.6	0.0	2.2	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
PaaX	PF07848.7	gi|449067955|ref|YP_007435037.1|	-	0.0042	17.0	0.1	0.0074	16.2	0.1	1.4	1	0	0	1	1	1	1	PaaX-like	protein
HTH_45	PF14947.1	gi|449067955|ref|YP_007435037.1|	-	0.0053	16.5	0.0	0.011	15.5	0.0	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_29	PF13551.1	gi|449067955|ref|YP_007435037.1|	-	0.011	15.8	0.1	0.018	15.1	0.1	1.4	1	0	0	1	1	1	0	Winged	helix-turn	helix
FeoC	PF09012.5	gi|449067955|ref|YP_007435037.1|	-	0.022	14.4	0.0	0.098	12.3	0.0	1.9	2	0	0	2	2	2	0	FeoC	like	transcriptional	regulator
HTH_Tnp_4	PF13613.1	gi|449067955|ref|YP_007435037.1|	-	0.026	14.0	0.6	0.31	10.6	0.0	2.4	2	0	0	2	2	2	0	Helix-turn-helix	of	DDE	superfamily	endonuclease
HTH_28	PF13518.1	gi|449067955|ref|YP_007435037.1|	-	0.055	13.4	0.1	0.11	12.5	0.1	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_10	PF04967.7	gi|449067955|ref|YP_007435037.1|	-	0.069	12.7	0.0	0.21	11.1	0.0	1.8	1	0	0	1	1	1	0	HTH	DNA	binding	domain
HTH_11	PF08279.7	gi|449067955|ref|YP_007435037.1|	-	0.08	12.5	0.7	0.44	10.2	0.0	2.4	2	0	0	2	2	2	0	HTH	domain
Mrr_N	PF14338.1	gi|449067955|ref|YP_007435037.1|	-	0.096	12.7	0.7	0.27	11.3	0.1	2.2	2	1	0	2	2	2	0	Mrr	N-terminal	domain
HTH_1	PF00126.22	gi|449067955|ref|YP_007435037.1|	-	0.12	12.1	0.8	0.35	10.6	0.0	2.2	3	0	0	3	3	3	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
DUF955	PF06114.8	gi|449067955|ref|YP_007435037.1|	-	0.13	12.0	0.0	0.43	10.3	0.0	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF955)
MFS_1	PF07690.11	gi|449067956|ref|YP_007435038.1|	-	1.4e-41	142.4	52.8	1.4e-41	142.4	36.6	3.4	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|449067956|ref|YP_007435038.1|	-	3.3e-09	35.8	26.0	1.6e-08	33.5	7.4	2.6	2	0	0	2	2	2	2	Sugar	(and	other)	transporter
PUCC	PF03209.10	gi|449067956|ref|YP_007435038.1|	-	5.9e-05	21.9	3.1	5.9e-05	21.9	2.2	2.5	2	0	0	2	2	2	1	PUCC	protein
MFS_3	PF05977.8	gi|449067956|ref|YP_007435038.1|	-	0.00049	18.3	13.6	0.00068	17.8	2.7	2.3	2	0	0	2	2	2	2	Transmembrane	secretion	effector
DUF2530	PF10745.4	gi|449067956|ref|YP_007435038.1|	-	0.058	13.3	1.1	5.3	7.0	0.0	3.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2530)
Adeno_E3_14_5	PF04834.7	gi|449067958|ref|YP_007435040.1|	-	0.32	11.4	2.6	0.74	10.2	0.2	2.2	2	0	0	2	2	2	0	Early	E3	14.5	kDa	protein
ABC_tran	PF00005.22	gi|449067960|ref|YP_007435042.1|	-	2.5e-21	76.4	0.0	5e-21	75.4	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|449067960|ref|YP_007435042.1|	-	4.1e-14	53.2	0.2	2.8e-06	27.5	0.0	2.5	2	1	1	3	3	3	2	AAA	domain
SMC_N	PF02463.14	gi|449067960|ref|YP_007435042.1|	-	9.7e-10	38.0	0.1	0.00036	19.8	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|449067960|ref|YP_007435042.1|	-	7.6e-05	23.1	0.3	0.00031	21.1	0.2	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|449067960|ref|YP_007435042.1|	-	0.00012	21.5	0.0	0.00027	20.3	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.1	gi|449067960|ref|YP_007435042.1|	-	0.00018	20.6	0.0	0.18	10.8	0.0	2.3	1	1	1	2	2	2	2	AAA	ATPase	domain
DUF258	PF03193.11	gi|449067960|ref|YP_007435042.1|	-	0.0005	19.2	0.0	0.0011	18.1	0.0	1.6	1	1	0	1	1	1	1	Protein	of	unknown	function,	DUF258
SbcCD_C	PF13558.1	gi|449067960|ref|YP_007435042.1|	-	0.0038	17.1	0.1	0.055	13.3	0.0	2.2	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
SRP54	PF00448.17	gi|449067960|ref|YP_007435042.1|	-	0.0075	15.7	0.0	0.014	14.8	0.0	1.4	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
NTPase_1	PF03266.10	gi|449067960|ref|YP_007435042.1|	-	0.0085	15.8	0.0	0.019	14.6	0.0	1.7	1	1	0	1	1	1	1	NTPase
AAA	PF00004.24	gi|449067960|ref|YP_007435042.1|	-	0.014	15.6	0.0	4.4	7.5	0.0	2.5	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_17	PF13207.1	gi|449067960|ref|YP_007435042.1|	-	0.021	15.6	0.7	0.12	13.2	0.5	2.3	1	1	0	1	1	1	0	AAA	domain
ABC_ATPase	PF09818.4	gi|449067960|ref|YP_007435042.1|	-	0.023	13.2	0.1	0.27	9.7	0.1	2.0	2	0	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
AAA_30	PF13604.1	gi|449067960|ref|YP_007435042.1|	-	0.038	13.5	0.0	0.07	12.6	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_33	PF13671.1	gi|449067960|ref|YP_007435042.1|	-	0.047	13.5	0.2	0.35	10.7	0.1	2.3	1	1	0	1	1	1	0	AAA	domain
AAA_16	PF13191.1	gi|449067960|ref|YP_007435042.1|	-	0.05	13.5	0.0	0.075	13.0	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
ATP_bind_1	PF03029.12	gi|449067960|ref|YP_007435042.1|	-	0.05	13.1	0.2	5.2	6.5	0.0	2.3	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
AAA_14	PF13173.1	gi|449067960|ref|YP_007435042.1|	-	0.065	13.1	0.0	0.16	11.8	0.0	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|449067960|ref|YP_007435042.1|	-	0.086	12.2	0.0	0.11	11.9	0.0	1.4	1	1	0	1	1	1	0	AAA-like	domain
AAA_22	PF13401.1	gi|449067960|ref|YP_007435042.1|	-	0.1	12.7	0.1	0.19	11.8	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
DUF2427	PF10348.4	gi|449067961|ref|YP_007435043.1|	-	2.8	7.5	12.9	0.15	11.6	3.1	2.6	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF2427)
Rieske	PF00355.21	gi|449067962|ref|YP_007435044.1|	-	9.9e-14	50.6	0.0	1.1e-13	50.5	0.0	1.1	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Rieske_2	PF13806.1	gi|449067962|ref|YP_007435044.1|	-	2.8e-10	39.8	0.0	3.3e-10	39.5	0.0	1.1	1	0	0	1	1	1	1	Rieske-like	[2Fe-2S]	domain
PQQ_3	PF13570.1	gi|449067963|ref|YP_007435045.1|	-	0.11	12.8	0.0	7.4	6.9	0.0	2.2	2	0	0	2	2	2	0	PQQ-like	domain
adh_short	PF00106.20	gi|449067964|ref|YP_007435046.1|	-	1.5e-31	109.5	0.0	1.8e-31	109.2	0.0	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|449067964|ref|YP_007435046.1|	-	2.4e-25	89.7	0.0	2.8e-25	89.5	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|449067964|ref|YP_007435046.1|	-	5.1e-13	49.0	0.0	6.9e-13	48.6	0.0	1.1	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.16	gi|449067964|ref|YP_007435046.1|	-	0.0061	16.0	0.0	0.0095	15.3	0.0	1.3	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
AMP-binding	PF00501.23	gi|449067965|ref|YP_007435047.1|	-	1.7e-81	273.7	0.0	2.2e-81	273.3	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|449067965|ref|YP_007435047.1|	-	7.4e-19	68.4	0.4	1.3e-18	67.7	0.3	1.4	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
GH3	PF03321.8	gi|449067965|ref|YP_007435047.1|	-	0.00048	18.7	0.3	0.0016	17.0	0.1	1.8	2	0	0	2	2	2	1	GH3	auxin-responsive	promoter
MR_MLE_C	PF13378.1	gi|449067966|ref|YP_007435048.1|	-	7.3e-24	83.8	0.0	1.7e-23	82.7	0.0	1.6	2	0	0	2	2	2	1	Enolase	C-terminal	domain-like
MR_MLE_N	PF02746.11	gi|449067966|ref|YP_007435048.1|	-	1.9e-16	60.1	0.0	3.3e-16	59.3	0.0	1.4	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	N-terminal	domain
MR_MLE	PF01188.16	gi|449067966|ref|YP_007435048.1|	-	7.4e-14	52.0	0.0	1.5e-13	51.0	0.0	1.5	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
Thiolase_C	PF02803.13	gi|449067967|ref|YP_007435049.1|	-	4.8e-05	22.7	0.2	0.00016	21.1	0.0	1.9	2	0	0	2	2	2	1	Thiolase,	C-terminal	domain
DUF35_N	PF12172.3	gi|449067968|ref|YP_007435050.1|	-	6.1e-08	32.3	3.1	9e-08	31.8	2.1	1.3	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF35	PF01796.12	gi|449067968|ref|YP_007435050.1|	-	2.2e-06	27.7	0.0	3.2e-06	27.2	0.0	1.3	1	0	0	1	1	1	1	DUF35	OB-fold	domain
DUF2082	PF09855.4	gi|449067968|ref|YP_007435050.1|	-	0.0024	17.6	2.3	0.099	12.5	0.0	2.3	1	1	1	2	2	2	1	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
HypA	PF01155.14	gi|449067968|ref|YP_007435050.1|	-	0.0038	16.9	0.1	0.0052	16.4	0.1	1.2	1	0	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
zinc_ribbon_5	PF13719.1	gi|449067968|ref|YP_007435050.1|	-	0.0068	15.9	1.8	0.063	12.8	0.0	2.5	2	0	0	2	2	2	1	zinc-ribbon	domain
FdhE	PF04216.7	gi|449067968|ref|YP_007435050.1|	-	0.039	13.6	0.9	0.05	13.3	0.6	1.1	1	0	0	1	1	1	0	Protein	involved	in	formate	dehydrogenase	formation
TFIIS_C	PF01096.13	gi|449067968|ref|YP_007435050.1|	-	0.064	12.8	2.7	2.3	7.9	0.1	2.3	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zf-TFIIB	PF13453.1	gi|449067968|ref|YP_007435050.1|	-	0.066	12.4	0.3	1.1	8.5	0.0	2.2	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
zinc_ribbon_2	PF13240.1	gi|449067968|ref|YP_007435050.1|	-	0.081	12.4	2.4	6.9	6.2	0.2	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
DZR	PF12773.2	gi|449067968|ref|YP_007435050.1|	-	0.089	12.6	0.6	0.13	12.0	0.4	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
DUF2387	PF09526.5	gi|449067968|ref|YP_007435050.1|	-	0.17	11.8	1.7	0.9	9.5	0.0	2.1	1	1	1	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
zinc_ribbon_4	PF13717.1	gi|449067968|ref|YP_007435050.1|	-	0.29	10.8	6.2	0.19	11.4	0.5	2.6	2	1	0	2	2	2	0	zinc-ribbon	domain
RRN7	PF11781.3	gi|449067968|ref|YP_007435050.1|	-	0.38	10.2	3.6	11	5.5	0.4	2.5	2	0	0	2	2	2	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
TF_Zn_Ribbon	PF08271.7	gi|449067968|ref|YP_007435050.1|	-	0.57	9.5	3.1	5.9	6.2	0.1	2.3	1	1	1	2	2	2	0	TFIIB	zinc-binding
Ribosomal_L33	PF00471.15	gi|449067968|ref|YP_007435050.1|	-	1.6	9.0	5.8	8.6	6.6	0.5	2.8	1	1	1	2	2	2	0	Ribosomal	protein	L33
zf-ribbon_3	PF13248.1	gi|449067968|ref|YP_007435050.1|	-	3.5	6.9	5.8	26	4.1	4.6	1.9	1	1	1	2	2	2	0	zinc-ribbon	domain
UPF0547	PF10571.4	gi|449067968|ref|YP_007435050.1|	-	4.1	7.1	6.9	2.8	7.7	0.5	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
Antitoxin-MazE	PF04014.13	gi|449067969|ref|YP_007435051.1|	-	9e-15	54.0	0.6	1.5e-14	53.2	0.4	1.4	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
PQQ_2	PF13360.1	gi|449067969|ref|YP_007435051.1|	-	0.14	11.6	0.0	0.14	11.5	0.0	1.1	1	0	0	1	1	1	0	PQQ-like	domain
AA_permease	PF00324.16	gi|449067971|ref|YP_007435053.1|	-	3.4e-24	85.0	56.3	4.9e-24	84.5	39.0	1.2	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease_2	PF13520.1	gi|449067971|ref|YP_007435053.1|	-	2.9e-15	55.7	62.3	4e-15	55.3	43.2	1.2	1	0	0	1	1	1	1	Amino	acid	permease
MMPL	PF03176.10	gi|449067972|ref|YP_007435054.1|	-	4.5e-65	219.5	10.7	7.3e-33	113.6	0.8	2.4	2	0	0	2	2	2	2	MMPL	family
F1F0-ATPsyn_F	PF10791.4	gi|449067972|ref|YP_007435054.1|	-	0.067	13.4	0.0	0.32	11.2	0.0	2.3	1	0	0	1	1	1	0	Mitochondrial	F1-F0	ATP	synthase	subunit	F	of	fungi
N6_N4_Mtase	PF01555.13	gi|449067975|ref|YP_007435057.1|	-	3.8e-42	144.3	0.1	5e-42	143.9	0.0	1.1	1	0	0	1	1	1	1	DNA	methylase
Methyltransf_26	PF13659.1	gi|449067975|ref|YP_007435057.1|	-	2.7e-11	43.5	0.0	5.8e-06	26.3	0.0	2.2	2	0	0	2	2	2	2	Methyltransferase	domain
UPF0020	PF01170.13	gi|449067975|ref|YP_007435057.1|	-	5.4e-05	22.8	0.0	0.0032	17.0	0.0	2.4	2	1	0	2	2	2	1	Putative	RNA	methylase	family	UPF0020
SUV3_C	PF12513.3	gi|449067975|ref|YP_007435057.1|	-	0.0033	16.8	1.6	0.03	13.7	0.2	2.4	2	0	0	2	2	2	1	Mitochondrial	degradasome	RNA	helicase	subunit	C	terminal
Pyr_redox	PF00070.22	gi|449067976|ref|YP_007435058.1|	-	0.11	12.8	0.1	25	5.3	0.1	2.5	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
PAZ_siRNAbind	PF12212.3	gi|449067976|ref|YP_007435058.1|	-	0.5	10.0	2.4	1.4	8.5	0.6	2.4	3	0	0	3	3	3	0	Piwi/Argonaute/Zwille	siRNA-binding	domain
HEPN	PF05168.9	gi|449067979|ref|YP_007435061.1|	-	2e-28	98.6	0.7	2.6e-28	98.2	0.5	1.1	1	0	0	1	1	1	1	HEPN	domain
NTP_transf_2	PF01909.18	gi|449067980|ref|YP_007435062.1|	-	1.6e-08	34.7	0.1	1.9e-08	34.5	0.0	1.2	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
Adenyl_cycl_N	PF12633.2	gi|449067980|ref|YP_007435062.1|	-	0.025	14.1	0.0	0.026	14.0	0.0	1.1	1	0	0	1	1	1	0	Adenylate	cyclase	NT	domain
Piwi	PF02171.12	gi|449067980|ref|YP_007435062.1|	-	0.083	11.8	0.0	0.13	11.2	0.0	1.2	1	0	0	1	1	1	0	Piwi	domain
HTH_20	PF12840.2	gi|449067981|ref|YP_007435063.1|	-	1.5e-10	40.6	0.0	4.5e-10	39.1	0.0	1.7	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|449067981|ref|YP_007435063.1|	-	5.4e-06	25.9	0.2	4.3e-05	23.1	0.1	2.3	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.1	gi|449067981|ref|YP_007435063.1|	-	0.0014	17.9	0.2	0.0037	16.5	0.1	1.8	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
DUF4097	PF13349.1	gi|449067981|ref|YP_007435063.1|	-	0.0016	18.0	0.2	0.0016	18.0	0.1	3.3	3	1	1	4	4	4	1	Domain	of	unknown	function	(DUF4097)
DUF4098	PF13345.1	gi|449067981|ref|YP_007435063.1|	-	0.01	15.7	4.3	0.01	15.7	3.0	3.4	2	1	2	4	4	4	0	Domain	of	unknown	function	(DUF4098)
PPC	PF04151.10	gi|449067981|ref|YP_007435063.1|	-	0.019	15.8	3.2	31	5.6	2.2	3.5	1	1	0	1	1	1	0	Bacterial	pre-peptidase	C-terminal	domain
HTH_45	PF14947.1	gi|449067981|ref|YP_007435063.1|	-	0.043	13.6	0.2	0.12	12.1	0.1	1.7	1	0	0	1	1	1	0	Winged	helix-turn-helix
EnY2	PF10163.4	gi|449067982|ref|YP_007435064.1|	-	0.19	11.6	1.2	0.27	11.2	0.7	1.4	1	1	0	1	1	1	0	Transcription	factor	e(y)2
PIN	PF01850.16	gi|449067983|ref|YP_007435065.1|	-	1.2e-10	41.7	1.2	1.8e-10	41.2	0.8	1.3	1	0	0	1	1	1	1	PIN	domain
T4_gp9_10	PF07880.6	gi|449067983|ref|YP_007435065.1|	-	0.039	13.0	0.0	0.046	12.7	0.0	1.0	1	0	0	1	1	1	0	Bacteriophage	T4	gp9/10-like	protein
DUF956	PF06115.6	gi|449067984|ref|YP_007435066.1|	-	0.069	12.7	0.0	0.13	11.8	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF956)
DUF2226	PF09987.4	gi|449067986|ref|YP_007435068.1|	-	0.01	14.9	0.1	0.011	14.8	0.1	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2226)
TylF	PF05711.6	gi|449067986|ref|YP_007435068.1|	-	0.068	12.2	0.0	0.068	12.2	0.0	1.1	1	0	0	1	1	1	0	Macrocin-O-methyltransferase	(TylF)
Antitoxin-MazE	PF04014.13	gi|449067987|ref|YP_007435069.1|	-	4.4e-06	26.2	1.4	8.4e-06	25.3	1.0	1.5	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
MraZ	PF02381.13	gi|449067987|ref|YP_007435069.1|	-	0.0038	16.9	0.1	0.0055	16.4	0.0	1.3	1	0	0	1	1	1	1	MraZ	protein
PIN	PF01850.16	gi|449067988|ref|YP_007435070.1|	-	3e-14	53.3	0.1	3.3e-14	53.2	0.0	1.0	1	0	0	1	1	1	1	PIN	domain
Cas_DxTHG	PF09455.5	gi|449067989|ref|YP_007435071.1|	-	5.7e-06	25.7	0.1	7.2e-06	25.4	0.1	1.1	1	0	0	1	1	1	1	CRISPR-associated	(Cas)	DxTHG	family
Staphostatin_B	PF09023.5	gi|449067989|ref|YP_007435071.1|	-	0.042	13.6	0.0	0.079	12.7	0.0	1.5	1	1	0	1	1	1	0	Staphostatin	B
Cas_DxTHG	PF09455.5	gi|449067990|ref|YP_007435072.1|	-	7.2e-15	55.0	8.4	9.6e-08	31.5	0.3	2.0	1	1	1	2	2	2	2	CRISPR-associated	(Cas)	DxTHG	family
ODV-E18	PF10717.4	gi|449067991|ref|YP_007435073.1|	-	0.0095	15.3	0.3	0.012	15.0	0.2	1.2	1	0	0	1	1	1	1	Occlusion-derived	virus	envelope	protein	ODV-E18
DUF4064	PF13273.1	gi|449067991|ref|YP_007435073.1|	-	0.017	15.2	0.1	0.017	15.2	0.1	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4064)
DUF912	PF06024.7	gi|449067991|ref|YP_007435073.1|	-	0.019	14.9	0.1	0.019	14.9	0.1	1.0	1	0	0	1	1	1	0	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF912)
Baculo_E56	PF04639.7	gi|449067991|ref|YP_007435073.1|	-	0.047	12.3	0.2	0.047	12.3	0.1	1.0	1	0	0	1	1	1	0	Baculoviral	E56	protein,	specific	to	ODV	envelope
Rifin_STEVOR	PF02009.11	gi|449067991|ref|YP_007435073.1|	-	0.051	13.2	0.6	0.05	13.2	0.4	1.0	1	0	0	1	1	1	0	Rifin/stevor	family
DUF4568	PF15132.1	gi|449067991|ref|YP_007435073.1|	-	0.056	12.6	0.2	0.063	12.4	0.2	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4568)
DUF4282	PF14110.1	gi|449067991|ref|YP_007435073.1|	-	0.066	13.4	2.5	0.085	13.0	1.7	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4282)
TMEM154	PF15102.1	gi|449067991|ref|YP_007435073.1|	-	0.067	12.8	1.0	0.069	12.8	0.7	1.1	1	0	0	1	1	1	0	TMEM154	protein	family
Herpes_gE	PF02480.11	gi|449067991|ref|YP_007435073.1|	-	0.071	11.3	0.3	0.07	11.3	0.2	1.0	1	0	0	1	1	1	0	Alphaherpesvirus	glycoprotein	E
ASFV_J13L	PF05568.6	gi|449067991|ref|YP_007435073.1|	-	0.19	11.2	0.7	0.2	11.1	0.5	1.1	1	0	0	1	1	1	0	African	swine	fever	virus	J13L	protein
Shisa	PF13908.1	gi|449067991|ref|YP_007435073.1|	-	0.2	11.7	0.5	0.25	11.4	0.4	1.2	1	0	0	1	1	1	0	Wnt	and	FGF	inhibitory	regulator
DUF2672	PF10878.3	gi|449067992|ref|YP_007435074.1|	-	0.12	12.1	0.4	0.14	11.9	0.3	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2672)
AAA_5	PF07728.9	gi|449067994|ref|YP_007435076.1|	-	2.8e-17	62.7	0.0	1.2e-16	60.7	0.0	2.1	2	1	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA	PF00004.24	gi|449067994|ref|YP_007435076.1|	-	1.7e-06	28.2	0.0	3.4e-05	24.0	0.0	2.7	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_18	PF13238.1	gi|449067994|ref|YP_007435076.1|	-	1.9e-06	28.1	0.4	2.5e-05	24.5	0.0	3.0	3	1	0	3	3	3	1	AAA	domain
RuvB_N	PF05496.7	gi|449067994|ref|YP_007435076.1|	-	2.2e-06	26.8	0.0	3.8e-06	26.1	0.0	1.3	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_17	PF13207.1	gi|449067994|ref|YP_007435076.1|	-	7.6e-05	23.5	0.9	0.00033	21.4	0.0	2.6	3	2	0	3	3	2	1	AAA	domain
AAA_22	PF13401.1	gi|449067994|ref|YP_007435076.1|	-	8.4e-05	22.7	0.0	0.00035	20.7	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
IstB_IS21	PF01695.12	gi|449067994|ref|YP_007435076.1|	-	0.00011	21.6	0.0	0.00027	20.3	0.0	1.6	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_14	PF13173.1	gi|449067994|ref|YP_007435076.1|	-	0.0015	18.4	0.0	0.017	15.0	0.0	2.7	2	1	0	2	2	2	1	AAA	domain
AAA_19	PF13245.1	gi|449067994|ref|YP_007435076.1|	-	0.0016	18.1	0.0	0.0031	17.2	0.0	1.4	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_16	PF13191.1	gi|449067994|ref|YP_007435076.1|	-	0.0021	18.0	0.0	0.0044	17.0	0.0	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
RNA_helicase	PF00910.17	gi|449067994|ref|YP_007435076.1|	-	0.0034	17.5	0.0	0.0083	16.2	0.0	1.7	1	0	0	1	1	1	1	RNA	helicase
AAA_3	PF07726.6	gi|449067994|ref|YP_007435076.1|	-	0.0035	16.9	0.2	0.15	11.6	0.0	2.9	3	1	0	3	3	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Mg_chelatase	PF01078.16	gi|449067994|ref|YP_007435076.1|	-	0.0057	15.8	0.0	0.011	14.8	0.0	1.5	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
ATP-synt_ab	PF00006.20	gi|449067994|ref|YP_007435076.1|	-	0.0076	15.7	0.0	0.0095	15.4	0.0	1.3	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
DUF258	PF03193.11	gi|449067994|ref|YP_007435076.1|	-	0.021	13.9	0.0	0.048	12.8	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
Sigma54_activ_2	PF14532.1	gi|449067994|ref|YP_007435076.1|	-	0.032	14.2	0.0	0.79	9.7	0.0	2.5	2	0	0	2	2	2	0	Sigma-54	interaction	domain
AAA_33	PF13671.1	gi|449067994|ref|YP_007435076.1|	-	0.033	14.0	0.0	0.084	12.7	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.7	gi|449067994|ref|YP_007435076.1|	-	0.093	11.8	0.0	0.24	10.4	0.0	1.6	1	0	0	1	1	1	0	Zeta	toxin
AAA_14	PF13173.1	gi|449067997|ref|YP_007435079.1|	-	8.3e-30	103.3	0.0	1.7e-29	102.3	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
DUF4143	PF13635.1	gi|449067997|ref|YP_007435079.1|	-	9.7e-10	38.5	0.2	1.8e-09	37.6	0.1	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
Arch_ATPase	PF01637.13	gi|449067997|ref|YP_007435079.1|	-	0.00019	21.2	4.6	0.12	12.0	0.0	3.1	2	1	1	3	3	3	2	Archaeal	ATPase
AAA_17	PF13207.1	gi|449067997|ref|YP_007435079.1|	-	0.0046	17.7	3.5	0.031	15.1	0.0	2.6	2	1	0	2	2	2	1	AAA	domain
DUF746	PF05344.6	gi|449067997|ref|YP_007435079.1|	-	0.086	12.3	0.0	0.17	11.4	0.0	1.4	1	0	0	1	1	1	0	Domain	of	Unknown	Function	(DUF746)
HTH_24	PF13412.1	gi|449067998|ref|YP_007435080.1|	-	3.2e-05	23.2	0.1	6.6e-05	22.2	0.1	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_IclR	PF09339.5	gi|449067998|ref|YP_007435080.1|	-	6.5e-05	22.4	0.0	0.00012	21.6	0.0	1.4	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
MarR_2	PF12802.2	gi|449067998|ref|YP_007435080.1|	-	0.00027	20.5	0.0	0.0006	19.4	0.0	1.6	2	0	0	2	2	2	1	MarR	family
HTH_45	PF14947.1	gi|449067998|ref|YP_007435080.1|	-	0.0041	16.8	0.0	0.0064	16.2	0.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix
DUF2407	PF10302.4	gi|449067998|ref|YP_007435080.1|	-	0.014	15.5	0.2	0.12	12.5	0.0	1.9	1	1	1	2	2	2	0	DUF2407	ubiquitin-like	domain
HTH_27	PF13463.1	gi|449067998|ref|YP_007435080.1|	-	0.084	13.2	0.1	0.16	12.3	0.1	1.5	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
HemN_C	PF06969.11	gi|449067998|ref|YP_007435080.1|	-	0.096	12.7	0.0	0.19	11.8	0.0	1.5	1	0	0	1	1	1	0	HemN	C-terminal	domain
DUF2851	PF11013.3	gi|449067998|ref|YP_007435080.1|	-	0.1	11.3	0.0	0.12	11.1	0.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2851)
DUF973	PF06157.6	gi|449067999|ref|YP_007435081.1|	-	2.7e-19	69.2	17.1	1.5e-11	43.8	1.3	2.0	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF973)
Bac_export_3	PF01313.14	gi|449067999|ref|YP_007435081.1|	-	0.014	15.0	2.8	0.014	15.0	1.9	2.5	2	1	0	2	2	2	0	Bacterial	export	proteins,	family	3
DUF1129	PF06570.6	gi|449067999|ref|YP_007435081.1|	-	1	8.6	6.5	0.23	10.7	1.1	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1129)
Oxidored_q2	PF00420.19	gi|449067999|ref|YP_007435081.1|	-	1.1	8.8	15.1	0.068	12.7	5.7	2.1	1	1	2	3	3	3	0	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
DUF4131	PF13567.1	gi|449067999|ref|YP_007435081.1|	-	3.7	6.9	6.2	3.2	7.1	3.2	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
YiaAB	PF05360.9	gi|449067999|ref|YP_007435081.1|	-	7.5	6.1	10.1	0.56	9.8	0.4	3.2	2	1	1	3	3	3	0	yiaA/B	two	helix	domain
DUF1469	PF07332.6	gi|449067999|ref|YP_007435081.1|	-	7.6	6.2	16.8	0.22	11.2	3.6	2.5	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1469)
DUF3165	PF11364.3	gi|449067999|ref|YP_007435081.1|	-	9.4	6.4	10.6	1.7	8.8	4.2	2.0	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3165)
PIN	PF01850.16	gi|449068000|ref|YP_007435082.1|	-	0.003	17.8	0.2	0.0035	17.6	0.1	1.1	1	0	0	1	1	1	1	PIN	domain
Glyco_transf_11	PF01531.11	gi|449068000|ref|YP_007435082.1|	-	0.048	12.6	0.5	0.099	11.6	0.2	1.6	1	1	1	2	2	2	0	Glycosyl	transferase	family	11
ABC2_membrane_4	PF12730.2	gi|449068001|ref|YP_007435083.1|	-	0.36	9.9	8.2	0.59	9.2	0.7	2.0	1	1	1	2	2	2	0	ABC-2	family	transporter	protein
ABC_tran	PF00005.22	gi|449068003|ref|YP_007435085.1|	-	1.3e-22	80.5	0.0	1.9e-22	80.0	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|449068003|ref|YP_007435085.1|	-	5.7e-09	36.3	1.7	1.6e-08	34.9	1.2	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|449068003|ref|YP_007435085.1|	-	2.9e-06	26.7	0.1	5.4e-06	25.8	0.1	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
SMC_N	PF02463.14	gi|449068003|ref|YP_007435085.1|	-	6.6e-06	25.5	1.1	0.066	12.4	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|449068003|ref|YP_007435085.1|	-	2.2e-05	24.8	0.4	4e-05	24.0	0.3	1.3	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|449068003|ref|YP_007435085.1|	-	0.00016	20.8	5.6	0.097	11.7	0.6	2.5	2	1	1	3	3	3	2	AAA	ATPase	domain
AAA_19	PF13245.1	gi|449068003|ref|YP_007435085.1|	-	0.0002	21.0	0.0	0.0047	16.6	0.0	2.3	2	0	0	2	2	2	1	Part	of	AAA	domain
T2SE	PF00437.15	gi|449068003|ref|YP_007435085.1|	-	0.00078	18.4	0.2	0.0016	17.4	0.2	1.5	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
DUF258	PF03193.11	gi|449068003|ref|YP_007435085.1|	-	0.00081	18.6	0.2	0.0015	17.7	0.2	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_16	PF13191.1	gi|449068003|ref|YP_007435085.1|	-	0.0011	18.9	0.1	0.0024	17.8	0.0	1.5	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_10	PF12846.2	gi|449068003|ref|YP_007435085.1|	-	0.0066	15.9	0.6	0.059	12.7	0.4	2.2	1	1	0	1	1	1	1	AAA-like	domain
PIF1	PF05970.9	gi|449068003|ref|YP_007435085.1|	-	0.0087	15.0	0.0	0.014	14.3	0.0	1.2	1	0	0	1	1	1	1	PIF1-like	helicase
AAA_14	PF13173.1	gi|449068003|ref|YP_007435085.1|	-	0.011	15.6	0.0	0.027	14.3	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
DLIC	PF05783.6	gi|449068003|ref|YP_007435085.1|	-	0.013	14.1	0.0	0.025	13.2	0.0	1.4	1	0	0	1	1	1	0	Dynein	light	intermediate	chain	(DLIC)
Mg_chelatase	PF01078.16	gi|449068003|ref|YP_007435085.1|	-	0.013	14.6	0.0	0.02	14.0	0.0	1.2	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
NACHT	PF05729.7	gi|449068003|ref|YP_007435085.1|	-	0.027	14.1	0.0	0.05	13.2	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
FtsK_SpoIIIE	PF01580.13	gi|449068003|ref|YP_007435085.1|	-	0.037	13.5	0.1	0.061	12.7	0.1	1.3	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
PduV-EutP	PF10662.4	gi|449068003|ref|YP_007435085.1|	-	0.052	13.0	0.1	0.34	10.3	0.0	2.2	2	1	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
Miro	PF08477.8	gi|449068003|ref|YP_007435085.1|	-	0.067	13.6	0.0	0.14	12.6	0.0	1.7	1	1	0	1	1	1	0	Miro-like	protein
AAA_17	PF13207.1	gi|449068003|ref|YP_007435085.1|	-	0.08	13.7	1.0	0.33	11.7	0.7	2.2	1	1	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.12	gi|449068003|ref|YP_007435085.1|	-	0.083	12.3	0.1	0.14	11.5	0.0	1.3	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA_13	PF13166.1	gi|449068003|ref|YP_007435085.1|	-	0.093	11.1	0.2	0.13	10.6	0.1	1.2	1	0	0	1	1	1	0	AAA	domain
GTP_EFTU	PF00009.22	gi|449068003|ref|YP_007435085.1|	-	0.11	11.9	0.0	0.23	10.8	0.0	1.5	1	0	0	1	1	1	0	Elongation	factor	Tu	GTP	binding	domain
AAA_25	PF13481.1	gi|449068003|ref|YP_007435085.1|	-	0.13	11.6	0.0	3.4	7.0	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
MMR_HSR1	PF01926.18	gi|449068003|ref|YP_007435085.1|	-	0.14	12.1	1.2	1.7	8.5	0.3	2.4	2	1	0	2	2	2	0	50S	ribosome-binding	GTPase
cobW	PF02492.14	gi|449068003|ref|YP_007435085.1|	-	0.14	11.5	0.3	0.26	10.6	0.2	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
Dynamin_N	PF00350.18	gi|449068003|ref|YP_007435085.1|	-	0.15	11.8	0.2	0.29	10.9	0.1	1.5	1	0	0	1	1	1	0	Dynamin	family
PIN	PF01850.16	gi|449068005|ref|YP_007435087.1|	-	0.043	14.1	0.1	0.056	13.7	0.1	1.2	1	0	0	1	1	1	0	PIN	domain
RHH_1	PF01402.16	gi|449068006|ref|YP_007435088.1|	-	0.0015	18.3	0.2	0.0015	18.3	0.1	2.7	2	1	0	3	3	3	1	Ribbon-helix-helix	protein,	copG	family
DUF4415	PF14384.1	gi|449068006|ref|YP_007435088.1|	-	0.36	11.0	3.4	0.71	10.0	0.2	2.2	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4415)
HTH_23	PF13384.1	gi|449068010|ref|YP_007435092.1|	-	8.6e-05	22.0	1.9	0.0014	18.1	0.2	2.4	1	1	1	2	2	2	1	Homeodomain-like	domain
HTH_19	PF12844.2	gi|449068010|ref|YP_007435092.1|	-	0.00025	21.0	0.1	0.00047	20.1	0.1	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_28	PF13518.1	gi|449068010|ref|YP_007435092.1|	-	0.00032	20.6	0.1	0.00058	19.8	0.1	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
Mga	PF05043.8	gi|449068010|ref|YP_007435092.1|	-	0.00043	20.5	0.2	0.048	13.9	0.0	2.2	1	1	1	2	2	2	2	Mga	helix-turn-helix	domain
HTH_11	PF08279.7	gi|449068010|ref|YP_007435092.1|	-	0.00048	19.7	0.2	0.0012	18.4	0.0	1.8	2	0	0	2	2	1	1	HTH	domain
HTH_3	PF01381.17	gi|449068010|ref|YP_007435092.1|	-	0.0006	19.6	0.0	0.0015	18.3	0.0	1.7	1	0	0	1	1	1	1	Helix-turn-helix
HTH_24	PF13412.1	gi|449068010|ref|YP_007435092.1|	-	0.00063	19.0	1.0	0.0098	15.2	0.0	2.8	3	0	0	3	3	3	1	Winged	helix-turn-helix	DNA-binding
HTH_Mga	PF08280.6	gi|449068010|ref|YP_007435092.1|	-	0.00082	19.0	0.5	0.29	10.9	0.0	2.5	2	1	0	2	2	2	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
UPF0122	PF04297.9	gi|449068010|ref|YP_007435092.1|	-	0.0013	18.7	0.4	0.0017	18.3	0.3	1.3	1	0	0	1	1	1	1	Putative	helix-turn-helix	protein,	YlxM	/	p13	like
HTH_Tnp_1	PF01527.15	gi|449068010|ref|YP_007435092.1|	-	0.0014	18.5	0.1	0.003	17.4	0.0	1.6	1	1	0	1	1	1	1	Transposase
MarR	PF01047.17	gi|449068010|ref|YP_007435092.1|	-	0.002	17.7	0.1	0.024	14.3	0.0	2.5	3	1	0	3	3	3	1	MarR	family
HTH_29	PF13551.1	gi|449068010|ref|YP_007435092.1|	-	0.0027	17.8	0.0	0.0043	17.1	0.0	1.4	1	1	0	1	1	1	1	Winged	helix-turn	helix
TetR_N	PF00440.18	gi|449068010|ref|YP_007435092.1|	-	0.0028	17.2	0.0	0.0053	16.3	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	tetR	family
HTH_5	PF01022.15	gi|449068010|ref|YP_007435092.1|	-	0.005	16.4	0.0	0.015	14.9	0.0	1.8	2	0	0	2	2	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_40	PF14493.1	gi|449068010|ref|YP_007435092.1|	-	0.0082	16.3	0.4	0.013	15.6	0.3	1.5	1	1	0	1	1	1	1	Helix-turn-helix	domain
Phage_AlpA	PF05930.7	gi|449068010|ref|YP_007435092.1|	-	0.012	15.3	0.0	0.022	14.4	0.0	1.4	1	0	0	1	1	1	0	Prophage	CP4-57	regulatory	protein	(AlpA)
P22_Cro	PF14549.1	gi|449068010|ref|YP_007435092.1|	-	0.017	14.7	0.0	0.03	14.0	0.0	1.4	1	0	0	1	1	1	0	DNA-binding	transcriptional	regulator	Cro
HTH_38	PF13936.1	gi|449068010|ref|YP_007435092.1|	-	0.022	14.2	0.2	0.07	12.7	0.0	1.9	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_CodY	PF08222.6	gi|449068010|ref|YP_007435092.1|	-	0.026	13.8	0.2	0.057	12.7	0.1	1.7	1	1	0	1	1	1	0	CodY	helix-turn-helix	domain
HTH_17	PF12728.2	gi|449068010|ref|YP_007435092.1|	-	0.028	14.6	0.1	0.056	13.7	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
MerR	PF00376.18	gi|449068010|ref|YP_007435092.1|	-	0.034	13.7	0.0	0.082	12.4	0.0	1.7	1	0	0	1	1	1	0	MerR	family	regulatory	protein
HTH_10	PF04967.7	gi|449068010|ref|YP_007435092.1|	-	0.036	13.6	0.0	0.095	12.2	0.0	1.7	2	0	0	2	2	1	0	HTH	DNA	binding	domain
HTH_Tnp_1_2	PF13022.1	gi|449068010|ref|YP_007435092.1|	-	0.044	13.5	0.1	0.06	13.1	0.1	1.3	1	1	0	1	1	1	0	Helix-turn-helix	of	insertion	element	transposase
HTH_AsnC-type	PF13404.1	gi|449068010|ref|YP_007435092.1|	-	0.055	13.0	0.0	0.13	11.7	0.0	1.6	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
HTH_8	PF02954.14	gi|449068010|ref|YP_007435092.1|	-	0.056	12.9	0.0	0.14	11.6	0.0	1.7	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	Fis	family
Sigma70_r4_2	PF08281.7	gi|449068010|ref|YP_007435092.1|	-	0.06	12.8	0.1	0.15	11.5	0.0	1.7	2	0	0	2	2	1	0	Sigma-70,	region	4
HTH_7	PF02796.10	gi|449068010|ref|YP_007435092.1|	-	0.063	13.1	0.5	0.16	11.8	0.3	1.8	1	1	0	1	1	1	0	Helix-turn-helix	domain	of	resolvase
TrmB	PF01978.14	gi|449068010|ref|YP_007435092.1|	-	0.068	12.8	0.1	0.38	10.4	0.0	2.1	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
MerR_1	PF13411.1	gi|449068010|ref|YP_007435092.1|	-	0.072	12.8	0.5	0.14	11.9	0.4	1.7	1	1	0	1	1	1	0	MerR	HTH	family	regulatory	protein
SpoIIID	PF12116.3	gi|449068010|ref|YP_007435092.1|	-	0.087	12.7	0.1	0.15	12.0	0.1	1.4	1	0	0	1	1	1	0	Stage	III	sporulation	protein	D
HTH_Tnp_Tc3_1	PF11427.3	gi|449068010|ref|YP_007435092.1|	-	0.095	12.3	0.0	0.17	11.5	0.0	1.4	1	0	0	1	1	1	0	Tc3	transposase
HTH_26	PF13443.1	gi|449068010|ref|YP_007435092.1|	-	0.11	12.6	0.1	0.37	11.0	0.0	1.8	2	0	0	2	2	2	0	Cro/C1-type	HTH	DNA-binding	domain
DUF2276	PF10040.4	gi|449068013|ref|YP_007435095.1|	-	1e-30	106.3	0.1	2.7e-30	105.0	0.1	1.7	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2276)
DUF223	PF02721.9	gi|449068013|ref|YP_007435095.1|	-	0.0052	16.8	0.2	0.012	15.7	0.2	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF223
Cas_Cas6	PF01881.11	gi|449068013|ref|YP_007435095.1|	-	0.18	12.0	1.8	1.5	9.0	0.0	2.6	2	1	1	3	3	3	0	CRISPR	associated	protein	Cas6
DUF2919	PF11143.3	gi|449068014|ref|YP_007435096.1|	-	0.0033	17.2	0.6	0.0048	16.7	0.5	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF2919)
AA_permease_2	PF13520.1	gi|449068014|ref|YP_007435096.1|	-	0.0042	15.6	3.0	0.005	15.4	2.1	1.1	1	0	0	1	1	1	1	Amino	acid	permease
Acyl_transf_3	PF01757.17	gi|449068014|ref|YP_007435096.1|	-	0.0069	15.2	0.2	0.0082	15.0	0.1	1.0	1	0	0	1	1	1	1	Acyltransferase	family
DUF819	PF05684.7	gi|449068014|ref|YP_007435096.1|	-	0.0096	14.7	2.0	0.011	14.5	1.4	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF819)
TspO_MBR	PF03073.10	gi|449068014|ref|YP_007435096.1|	-	0.043	13.3	0.3	0.053	13.0	0.2	1.4	1	0	0	1	1	1	0	TspO/MBR	family
CppA_N	PF14506.1	gi|449068014|ref|YP_007435096.1|	-	0.12	12.0	0.0	0.42	10.2	0.0	1.8	2	0	0	2	2	2	0	CppA	N-terminal
7TM-7TMR_HD	PF07698.6	gi|449068014|ref|YP_007435096.1|	-	0.14	11.6	4.1	0.05	13.0	0.7	1.7	1	1	1	2	2	2	0	7TM	receptor	with	intracellular	HD	hydrolase
DUF3278	PF11683.3	gi|449068014|ref|YP_007435096.1|	-	0.22	11.5	3.8	1.2	9.1	0.2	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3278)
DUF3810	PF12725.2	gi|449068014|ref|YP_007435096.1|	-	0.78	8.5	2.8	0.93	8.3	2.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3810)
DUF4234	PF14018.1	gi|449068014|ref|YP_007435096.1|	-	1.7	8.4	5.9	0.61	9.8	1.0	2.4	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4234)
DUF3165	PF11364.3	gi|449068014|ref|YP_007435096.1|	-	4.8	7.3	8.6	0.91	9.6	3.4	1.8	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3165)
COX2_TM	PF02790.10	gi|449068014|ref|YP_007435096.1|	-	8.9	6.3	6.9	0.39	10.7	0.5	1.9	2	1	0	2	2	2	0	Cytochrome	C	oxidase	subunit	II,	transmembrane	domain
CRISPR_Cas2	PF09827.4	gi|449068016|ref|YP_007435098.1|	-	1.4e-18	66.7	0.1	1.6e-18	66.5	0.0	1.1	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas2
Cas_Cas1	PF01867.11	gi|449068017|ref|YP_007435099.1|	-	8.7e-65	218.5	0.1	1e-64	218.3	0.0	1.0	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas1
B12-binding	PF02310.14	gi|449068018|ref|YP_007435100.1|	-	0.0015	18.3	0.0	0.0031	17.3	0.0	1.5	1	0	0	1	1	1	1	B12	binding	domain
His_Phos_1	PF00300.17	gi|449068019|ref|YP_007435101.1|	-	1.4e-14	54.4	0.1	1.2e-13	51.4	0.0	1.9	1	1	1	2	2	2	1	Histidine	phosphatase	superfamily	(branch	1)
Ppx-GppA	PF02541.11	gi|449068020|ref|YP_007435102.1|	-	7.4e-41	140.2	0.0	1.1e-40	139.6	0.0	1.2	1	0	0	1	1	1	1	Ppx/GppA	phosphatase	family
ASL_C	PF08328.6	gi|449068020|ref|YP_007435102.1|	-	0.14	12.0	0.0	1.1	9.0	0.0	2.3	2	0	0	2	2	2	0	Adenylosuccinate	lyase	C-terminal
Thymidylate_kin	PF02223.12	gi|449068021|ref|YP_007435103.1|	-	3.8e-29	101.3	0.0	9e-29	100.1	0.0	1.5	1	1	0	1	1	1	1	Thymidylate	kinase
AAA_18	PF13238.1	gi|449068021|ref|YP_007435103.1|	-	5.9e-05	23.3	0.1	0.00028	21.1	0.0	2.1	1	1	1	2	2	2	1	AAA	domain
AAA_33	PF13671.1	gi|449068021|ref|YP_007435103.1|	-	0.0034	17.2	0.0	0.0068	16.2	0.0	1.5	2	0	0	2	2	2	1	AAA	domain
dNK	PF01712.14	gi|449068021|ref|YP_007435103.1|	-	0.015	15.2	0.1	0.028	14.3	0.1	1.6	1	1	0	1	1	1	0	Deoxynucleoside	kinase
Thymidylate_kin	PF02223.12	gi|449068022|ref|YP_007435104.1|	-	1.3e-11	44.2	0.0	1.6e-11	43.9	0.0	1.1	1	0	0	1	1	1	1	Thymidylate	kinase
AAA_17	PF13207.1	gi|449068022|ref|YP_007435104.1|	-	0.00051	20.8	0.0	0.00096	19.9	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|449068022|ref|YP_007435104.1|	-	0.00071	19.8	0.0	0.0027	17.9	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
UPF0079	PF02367.12	gi|449068022|ref|YP_007435104.1|	-	0.0044	16.6	0.1	0.056	13.0	0.0	2.2	2	0	0	2	2	2	1	Uncharacterised	P-loop	hydrolase	UPF0079
KTI12	PF08433.5	gi|449068022|ref|YP_007435104.1|	-	0.009	15.2	0.0	0.018	14.2	0.0	1.5	1	1	0	1	1	1	1	Chromatin	associated	protein	KTI12
AAA_30	PF13604.1	gi|449068022|ref|YP_007435104.1|	-	0.012	15.2	0.0	0.015	14.8	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
CPT	PF07931.7	gi|449068022|ref|YP_007435104.1|	-	0.013	15.1	0.0	0.019	14.5	0.0	1.3	1	0	0	1	1	1	0	Chloramphenicol	phosphotransferase-like	protein
AAA_14	PF13173.1	gi|449068022|ref|YP_007435104.1|	-	0.027	14.3	0.1	0.068	13.0	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
AAA_16	PF13191.1	gi|449068022|ref|YP_007435104.1|	-	0.034	14.1	0.0	0.055	13.4	0.0	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
ATP_bind_1	PF03029.12	gi|449068022|ref|YP_007435104.1|	-	0.035	13.6	0.0	0.082	12.4	0.0	1.6	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
ATP-synt_ab	PF00006.20	gi|449068022|ref|YP_007435104.1|	-	0.036	13.5	0.0	0.052	13.0	0.0	1.2	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_33	PF13671.1	gi|449068022|ref|YP_007435104.1|	-	0.039	13.8	0.0	0.06	13.2	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
MobB	PF03205.9	gi|449068022|ref|YP_007435104.1|	-	0.07	12.8	0.0	0.14	11.8	0.0	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
CHAD	PF05235.9	gi|449068023|ref|YP_007435105.1|	-	6.6e-07	29.1	3.1	0.00061	19.4	0.2	2.7	1	1	2	3	3	3	2	CHAD	domain
DUF3093	PF11292.3	gi|449068024|ref|YP_007435106.1|	-	0.031	14.0	0.0	0.039	13.7	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3093)
Resolvase	PF00239.16	gi|449068025|ref|YP_007435107.1|	-	1.3e-19	70.4	0.1	1.9e-19	69.9	0.1	1.3	1	0	0	1	1	1	1	Resolvase,	N	terminal	domain
HTH_17	PF12728.2	gi|449068025|ref|YP_007435107.1|	-	3.5e-12	46.3	0.2	7.4e-12	45.3	0.2	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
MerR	PF00376.18	gi|449068025|ref|YP_007435107.1|	-	5.8e-06	25.7	0.3	1.4e-05	24.5	0.0	1.8	2	0	0	2	2	2	1	MerR	family	regulatory	protein
MerR_1	PF13411.1	gi|449068025|ref|YP_007435107.1|	-	6.5e-06	25.8	0.1	1.5e-05	24.7	0.1	1.6	1	0	0	1	1	1	1	MerR	HTH	family	regulatory	protein
HTH_23	PF13384.1	gi|449068025|ref|YP_007435107.1|	-	0.001	18.6	0.0	0.0026	17.3	0.0	1.7	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.1	gi|449068025|ref|YP_007435107.1|	-	0.006	16.5	0.0	0.014	15.4	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
Phage_AlpA	PF05930.7	gi|449068025|ref|YP_007435107.1|	-	0.021	14.5	0.0	0.04	13.6	0.0	1.4	1	0	0	1	1	1	0	Prophage	CP4-57	regulatory	protein	(AlpA)
HTH_29	PF13551.1	gi|449068025|ref|YP_007435107.1|	-	0.04	14.0	0.0	0.087	12.9	0.0	1.8	1	1	0	1	1	1	0	Winged	helix-turn	helix
HTH_Tnp_1	PF01527.15	gi|449068025|ref|YP_007435107.1|	-	0.042	13.7	0.0	0.074	13.0	0.0	1.5	1	0	0	1	1	1	0	Transposase
OrfB_Zn_ribbon	PF07282.6	gi|449068026|ref|YP_007435108.1|	-	1.8e-17	62.7	0.0	3.5e-17	61.8	0.0	1.5	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
DUF3260	PF11658.3	gi|449068027|ref|YP_007435109.1|	-	1.8	6.5	6.0	2.2	6.3	4.2	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3260)
DUF3043	PF11241.3	gi|449068027|ref|YP_007435109.1|	-	8.5	5.9	7.9	0.52	9.8	2.0	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3043)
Arch_ATPase	PF01637.13	gi|449068028|ref|YP_007435110.1|	-	6.4e-38	130.7	1.5	1.1e-37	129.9	1.1	1.4	1	0	0	1	1	1	1	Archaeal	ATPase
AAA_14	PF13173.1	gi|449068028|ref|YP_007435110.1|	-	7.1e-09	35.6	0.7	0.00036	20.4	0.0	2.7	2	1	0	3	3	3	2	AAA	domain
AAA_16	PF13191.1	gi|449068028|ref|YP_007435110.1|	-	6.5e-06	26.2	0.0	1.2e-05	25.3	0.0	1.4	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|449068028|ref|YP_007435110.1|	-	4.7e-05	23.5	0.0	9.8e-05	22.5	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|449068028|ref|YP_007435110.1|	-	0.00054	20.1	0.0	0.0073	16.5	0.0	2.3	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
TrmB	PF01978.14	gi|449068028|ref|YP_007435110.1|	-	0.0011	18.5	0.0	0.0035	17.0	0.0	1.8	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
INT_SG_DDX_CT_C	PF15300.1	gi|449068028|ref|YP_007435110.1|	-	0.041	13.3	0.4	1.8	8.0	0.0	2.5	2	0	0	2	2	2	0	INTS6/SAGE1/DDX26B/CT45	C-terminus
PadR	PF03551.9	gi|449068028|ref|YP_007435110.1|	-	0.078	12.7	0.1	0.22	11.2	0.0	1.8	2	0	0	2	2	2	0	Transcriptional	regulator	PadR-like	family
AAA_17	PF13207.1	gi|449068028|ref|YP_007435110.1|	-	0.15	12.9	1.1	0.85	10.4	0.8	2.5	1	1	0	1	1	1	0	AAA	domain
TPR_11	PF13414.1	gi|449068029|ref|YP_007435111.1|	-	1.6e-79	261.5	43.1	4.2e-18	64.7	0.1	6.5	2	1	3	7	7	7	7	TPR	repeat
TPR_2	PF07719.12	gi|449068029|ref|YP_007435111.1|	-	2.6e-68	220.5	39.4	6.1e-09	35.1	0.4	10.9	11	0	0	11	11	11	10	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|449068029|ref|YP_007435111.1|	-	8.8e-64	208.6	50.6	5.1e-08	32.1	0.4	10.9	11	0	0	11	11	11	10	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|449068029|ref|YP_007435111.1|	-	1.5e-60	196.4	31.3	1.2e-07	31.3	0.1	11.3	11	0	0	11	11	11	10	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|449068029|ref|YP_007435111.1|	-	1.2e-46	156.3	15.9	2.9e-07	30.9	0.0	7.2	2	2	5	8	8	8	8	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|449068029|ref|YP_007435111.1|	-	5.2e-40	132.2	2.6	0.0049	17.3	0.0	10.3	2	1	8	10	10	10	10	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|449068029|ref|YP_007435111.1|	-	2.3e-38	127.0	47.4	1.6e-05	24.2	0.1	10.6	5	2	6	11	11	10	8	Tetratricopeptide	repeat
TPR_9	PF13371.1	gi|449068029|ref|YP_007435111.1|	-	4.5e-32	109.7	0.8	3.6e-06	26.7	0.0	6.3	3	1	3	6	6	6	6	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|449068029|ref|YP_007435111.1|	-	7.4e-30	103.0	22.4	5.1e-07	29.9	0.1	6.8	2	1	4	7	7	7	7	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|449068029|ref|YP_007435111.1|	-	8.6e-27	92.8	25.2	5.8e-07	29.3	0.1	6.7	2	1	3	6	6	6	6	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|449068029|ref|YP_007435111.1|	-	2.5e-25	88.4	19.6	1.1e-06	28.6	0.1	5.4	1	1	5	6	6	6	6	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_6	PF13174.1	gi|449068029|ref|YP_007435111.1|	-	1.4e-16	59.7	24.9	0.019	15.4	0.0	9.8	10	0	0	10	10	10	4	Tetratricopeptide	repeat
NARP1	PF12569.3	gi|449068029|ref|YP_007435111.1|	-	5.3e-16	58.4	12.0	0.00066	18.5	0.1	6.8	1	1	6	8	8	8	7	NMDA	receptor-regulated	protein	1
TPR_20	PF14561.1	gi|449068029|ref|YP_007435111.1|	-	4.4e-13	49.1	1.5	0.032	14.3	0.0	6.2	3	2	4	7	7	7	4	Tetratricopeptide	repeat
Syntaxin-6_N	PF09177.6	gi|449068029|ref|YP_007435111.1|	-	2.7e-08	34.0	1.6	0.27	11.6	0.1	5.4	3	2	4	7	7	5	3	Syntaxin	6,	N-terminal
Apc5	PF12862.2	gi|449068029|ref|YP_007435111.1|	-	3.6e-08	33.1	3.3	0.61	9.9	0.1	5.8	3	2	3	7	7	6	2	Anaphase-promoting	complex	subunit	5
BTAD	PF03704.12	gi|449068029|ref|YP_007435111.1|	-	1.6e-07	31.7	1.3	0.21	11.8	0.0	5.3	3	3	3	6	6	6	2	Bacterial	transcriptional	activator	domain
TPR_7	PF13176.1	gi|449068029|ref|YP_007435111.1|	-	3.3e-07	29.6	15.9	0.19	11.5	0.0	8.9	9	1	1	10	10	9	1	Tetratricopeptide	repeat
Fis1_TPR_C	PF14853.1	gi|449068029|ref|YP_007435111.1|	-	4.8e-07	29.5	17.8	0.045	13.6	0.1	7.3	5	2	4	9	9	8	3	Fis1	C-terminal	tetratricopeptide	repeat
TOM20_plant	PF06552.7	gi|449068029|ref|YP_007435111.1|	-	8.7e-06	25.4	7.0	0.036	13.6	0.0	5.4	3	3	2	5	5	5	1	Plant	specific	mitochondrial	import	receptor	subunit	TOM20
MIT	PF04212.13	gi|449068029|ref|YP_007435111.1|	-	2.8e-05	23.8	17.9	0.0086	15.9	0.3	6.8	4	2	1	6	6	6	2	MIT	(microtubule	interacting	and	transport)	domain
DUF3856	PF12968.2	gi|449068029|ref|YP_007435111.1|	-	4e-05	23.4	0.3	9.5	6.0	0.0	6.2	5	2	1	6	6	6	0	Domain	of	Unknown	Function	(DUF3856)
TPR_10	PF13374.1	gi|449068029|ref|YP_007435111.1|	-	0.0001	22.1	7.1	3.2	7.8	0.0	6.7	8	0	0	8	8	6	1	Tetratricopeptide	repeat
YfiO	PF13525.1	gi|449068029|ref|YP_007435111.1|	-	0.00039	19.9	21.5	0.79	9.1	1.0	6.2	1	1	3	4	4	4	3	Outer	membrane	lipoprotein
EST1_DNA_bind	PF10373.4	gi|449068029|ref|YP_007435111.1|	-	0.0042	16.3	3.3	8.1	5.5	0.0	4.6	5	1	0	5	5	4	0	Est1	DNA/RNA	binding	domain
SHNi-TPR	PF10516.4	gi|449068029|ref|YP_007435111.1|	-	0.0075	15.4	13.8	6.1	6.1	0.0	7.4	9	0	0	9	9	9	0	SHNi-TPR
DUF3209	PF11483.3	gi|449068029|ref|YP_007435111.1|	-	0.013	15.7	13.0	2.8	8.2	0.1	5.8	4	3	2	6	6	6	0	Protein	of	unknown	function	(DUF3209)
TPR_21	PF09976.4	gi|449068029|ref|YP_007435111.1|	-	0.055	13.4	9.7	1.2	9.0	0.0	4.4	4	2	0	4	4	4	0	Tetratricopeptide	repeat
TPR_18	PF13512.1	gi|449068029|ref|YP_007435111.1|	-	0.11	12.5	16.9	3.1	7.7	1.6	5.5	2	2	0	3	3	3	0	Tetratricopeptide	repeat
Gin	PF10764.4	gi|449068029|ref|YP_007435111.1|	-	0.15	11.8	13.0	3.5	7.4	0.1	6.3	7	0	0	7	7	6	0	Inhibitor	of	sigma-G	Gin
PA28_beta	PF02252.13	gi|449068029|ref|YP_007435111.1|	-	1.2	8.5	7.2	4.2	6.8	0.1	4.4	4	2	1	5	5	5	0	Proteasome	activator	pa28	beta	subunit
Glycos_transf_2	PF00535.21	gi|449068030|ref|YP_007435112.1|	-	3.4e-05	23.5	0.1	0.00015	21.4	0.1	1.9	1	1	1	2	2	2	1	Glycosyl	transferase	family	2
NicO	PF03824.11	gi|449068031|ref|YP_007435113.1|	-	1.6e-83	280.3	14.2	2.4e-83	279.7	9.8	1.3	1	0	0	1	1	1	1	High-affinity	nickel-transport	protein
DUF2231	PF09990.4	gi|449068031|ref|YP_007435113.1|	-	0.95	9.8	7.9	0.16	12.3	0.8	2.9	2	1	0	2	2	2	0	Predicted	membrane	protein	(DUF2231)
DUF3812	PF12757.2	gi|449068033|ref|YP_007435115.1|	-	0.016	15.1	0.0	0.018	15.0	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3812)
DUF217	PF02697.9	gi|449068033|ref|YP_007435115.1|	-	0.08	13.1	1.5	0.11	12.7	1.1	1.5	1	1	0	1	1	1	0	Uncharacterized	ACR,	COG1753
PIN	PF01850.16	gi|449068034|ref|YP_007435116.1|	-	3.9e-14	53.0	3.3	4.5e-14	52.8	2.3	1.0	1	0	0	1	1	1	1	PIN	domain
PIN_3	PF13470.1	gi|449068034|ref|YP_007435116.1|	-	0.024	15.2	0.2	0.028	15.0	0.2	1.1	1	0	0	1	1	1	0	PIN	domain
DUF4411	PF14367.1	gi|449068034|ref|YP_007435116.1|	-	0.16	11.6	0.3	2.5	7.8	0.2	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4411)
COXG	PF06240.8	gi|449068035|ref|YP_007435117.1|	-	5.1e-30	103.9	0.8	5.6e-30	103.8	0.6	1.0	1	0	0	1	1	1	1	Carbon	monoxide	dehydrogenase	subunit	G	(CoxG)
DAO	PF01266.19	gi|449068036|ref|YP_007435118.1|	-	2.2e-13	49.8	0.0	2.9e-13	49.4	0.0	1.1	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
DUF4352	PF11611.3	gi|449068036|ref|YP_007435118.1|	-	1.2e-06	28.6	3.0	1.2e-06	28.6	2.1	2.3	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4352)
DUF3753	PF12575.3	gi|449068036|ref|YP_007435118.1|	-	0.88	9.4	4.8	5.1	6.9	2.5	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3753)
DUF347	PF03988.7	gi|449068036|ref|YP_007435118.1|	-	3.7	7.5	0.0	3.7	7.5	0.0	2.7	3	0	0	3	3	3	0	Repeat	of	Unknown	Function	(DUF347)
DUF2324	PF10086.4	gi|449068037|ref|YP_007435119.1|	-	0.0007	18.8	8.6	0.042	13.0	5.9	2.2	1	1	0	1	1	1	1	Putative	membrane	peptidase	family	(DUF2324)
CcdA	PF07362.7	gi|449068038|ref|YP_007435120.1|	-	2e-07	30.7	3.0	3.4e-07	30.0	2.1	1.5	1	1	0	1	1	1	1	Post-segregation	antitoxin	CcdA
RHH_1	PF01402.16	gi|449068038|ref|YP_007435120.1|	-	6.7e-06	25.7	7.5	2.2e-05	24.1	0.3	2.8	3	0	0	3	3	3	1	Ribbon-helix-helix	protein,	copG	family
Imm42	PF15601.1	gi|449068038|ref|YP_007435120.1|	-	0.02	14.3	0.3	0.022	14.1	0.2	1.2	1	0	0	1	1	1	0	Immunity	protein	42
Nup84_Nup100	PF04121.8	gi|449068038|ref|YP_007435120.1|	-	0.034	11.8	2.6	0.038	11.6	1.8	1.0	1	0	0	1	1	1	0	Nuclear	pore	protein	84	/	107
Aldolase_2	PF10120.4	gi|449068038|ref|YP_007435120.1|	-	0.039	13.3	0.9	0.046	13.0	0.6	1.1	1	0	0	1	1	1	0	Putative	aldolase
DUF3323	PF11796.3	gi|449068038|ref|YP_007435120.1|	-	0.1	11.9	3.4	0.11	11.8	2.4	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	N-terminus	(DUF3323)
Histone_HNS	PF00816.16	gi|449068038|ref|YP_007435120.1|	-	0.13	12.8	3.0	0.96	10.0	0.3	2.1	1	1	1	2	2	2	0	H-NS	histone	family
DUF2664	PF10867.3	gi|449068038|ref|YP_007435120.1|	-	0.35	11.5	3.1	0.59	10.7	2.1	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2664)
YtxH	PF12732.2	gi|449068038|ref|YP_007435120.1|	-	0.58	10.5	3.0	0.77	10.1	2.1	1.2	1	0	0	1	1	1	0	YtxH-like	protein
CRF	PF00473.12	gi|449068038|ref|YP_007435120.1|	-	3.1	7.9	6.3	0.58	10.2	1.3	2.0	2	0	0	2	2	2	0	Corticotropin-releasing	factor	family
Nbs1_C	PF08599.5	gi|449068038|ref|YP_007435120.1|	-	3.7	7.5	5.2	1.2	9.1	1.6	1.7	1	1	1	2	2	2	0	DNA	damage	repair	protein	Nbs1
PIN	PF01850.16	gi|449068039|ref|YP_007435121.1|	-	1.2e-05	25.6	0.7	1.5e-05	25.3	0.5	1.2	1	0	0	1	1	1	1	PIN	domain
p450	PF00067.17	gi|449068040|ref|YP_007435122.1|	-	3.2e-23	81.9	0.2	3.9e-19	68.5	0.1	3.0	2	1	1	3	3	3	3	Cytochrome	P450
DUF973	PF06157.6	gi|449068041|ref|YP_007435123.1|	-	2.7e-63	213.5	38.0	6.5e-63	212.3	26.3	1.5	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
DUF996	PF06195.8	gi|449068041|ref|YP_007435123.1|	-	0.0028	17.6	33.9	0.01	15.8	18.9	2.8	2	2	1	3	3	3	3	Protein	of	unknown	function	(DUF996)
Isochorismatase	PF00857.15	gi|449068042|ref|YP_007435124.1|	-	1.3e-29	103.4	0.0	1.5e-29	103.1	0.0	1.1	1	0	0	1	1	1	1	Isochorismatase	family
MFS_1	PF07690.11	gi|449068043|ref|YP_007435125.1|	-	4.5e-60	203.2	53.3	2.1e-58	197.7	32.5	2.1	2	0	0	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|449068043|ref|YP_007435125.1|	-	2.9e-08	32.7	41.5	1.5e-07	30.3	12.1	2.8	3	0	0	3	3	3	2	Sugar	(and	other)	transporter
MFS_3	PF05977.8	gi|449068043|ref|YP_007435125.1|	-	4.3e-05	21.8	9.9	4.3e-05	21.8	6.9	2.2	2	0	0	2	2	2	1	Transmembrane	secretion	effector
DUF456	PF04306.8	gi|449068044|ref|YP_007435126.1|	-	0.1	12.6	3.1	0.11	12.5	2.1	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF456)
DUF1469	PF07332.6	gi|449068044|ref|YP_007435126.1|	-	0.28	10.9	2.3	0.35	10.6	1.6	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1469)
Claudin_2	PF13903.1	gi|449068044|ref|YP_007435126.1|	-	1.1	8.8	5.6	1.4	8.5	3.9	1.1	1	0	0	1	1	1	0	PMP-22/EMP/MP20/Claudin	tight	junction
DUF805	PF05656.9	gi|449068044|ref|YP_007435126.1|	-	1.5	8.6	5.4	1.8	8.3	3.8	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF805)
SecG	PF03840.9	gi|449068044|ref|YP_007435126.1|	-	2.3	8.0	8.7	0.47	10.2	1.8	2.3	2	1	0	2	2	2	0	Preprotein	translocase	SecG	subunit
DUF4231	PF14015.1	gi|449068044|ref|YP_007435126.1|	-	3.4	7.6	5.0	3.6	7.6	3.5	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4231)
SecE	PF00584.15	gi|449068044|ref|YP_007435126.1|	-	4	7.0	9.1	2.6	7.6	2.4	2.1	2	0	0	2	2	2	0	SecE/Sec61-gamma	subunits	of	protein	translocation	complex
SdpI	PF13630.1	gi|449068044|ref|YP_007435126.1|	-	5.4	6.7	9.7	7.7	6.3	6.7	1.2	1	0	0	1	1	1	0	SdpI/YhfL	protein	family
Cytochrom_B_N_2	PF13631.1	gi|449068045|ref|YP_007435127.1|	-	1.3e-54	184.4	6.3	1.3e-54	184.4	4.4	3.8	3	2	2	5	5	5	1	Cytochrome	b(N-terminal)/b6/petB
Cytochrom_B_C	PF00032.12	gi|449068045|ref|YP_007435127.1|	-	0.0054	16.9	3.2	0.0054	16.9	2.2	4.6	4	2	2	6	6	6	1	Cytochrome	b(C-terminal)/b6/petD
COX1	PF00115.15	gi|449068046|ref|YP_007435128.1|	-	3.1e-74	250.2	60.6	4.1e-74	249.8	42.0	1.0	1	0	0	1	1	1	1	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
COX2	PF00116.15	gi|449068047|ref|YP_007435129.1|	-	3.4e-05	23.6	0.0	5.4e-05	23.0	0.0	1.3	1	0	0	1	1	1	1	Cytochrome	C	oxidase	subunit	II,	periplasmic	domain
Rieske	PF00355.21	gi|449068048|ref|YP_007435130.1|	-	1.9e-11	43.3	0.6	4.6e-11	42.1	0.4	1.6	1	1	0	1	1	1	1	Rieske	[2Fe-2S]	domain
UCR_Fe-S_N	PF10399.4	gi|449068048|ref|YP_007435130.1|	-	0.16	11.1	0.5	0.33	10.1	0.0	1.7	2	0	0	2	2	2	0	Ubiquitinol-cytochrome	C	reductase	Fe-S	subunit	TAT	signal
OAD_gamma	PF04277.8	gi|449068049|ref|YP_007435131.1|	-	0.21	11.9	0.7	0.21	11.9	0.5	2.0	2	0	0	2	2	2	0	Oxaloacetate	decarboxylase,	gamma	chain
DUF1206	PF06724.6	gi|449068049|ref|YP_007435131.1|	-	7.6	6.3	12.8	3.6	7.4	0.8	3.0	3	0	0	3	3	3	0	Domain	of	Unknown	Function	(DUF1206)
DUF1469	PF07332.6	gi|449068050|ref|YP_007435132.1|	-	0.082	12.6	5.3	0.17	11.6	3.6	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1469)
PAP2_C	PF14360.1	gi|449068050|ref|YP_007435132.1|	-	2	8.7	5.2	0.31	11.3	0.5	1.9	2	0	0	2	2	2	0	PAP2	superfamily	C-terminal
Nramp	PF01566.13	gi|449068052|ref|YP_007435134.1|	-	7.7e-39	133.4	21.1	1e-38	133.0	14.6	1.1	1	0	0	1	1	1	1	Natural	resistance-associated	macrophage	protein
Sugar_tr	PF00083.19	gi|449068053|ref|YP_007435135.1|	-	8e-52	176.3	24.7	9.4e-52	176.0	17.1	1.0	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|449068053|ref|YP_007435135.1|	-	2.3e-22	79.2	35.3	2.3e-22	79.2	24.5	1.8	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
DUF1129	PF06570.6	gi|449068053|ref|YP_007435135.1|	-	1.1	8.5	5.9	0.2	10.9	0.5	2.4	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1129)
SoxE	PF06525.6	gi|449068054|ref|YP_007435136.1|	-	3.8e-61	205.7	10.1	4.3e-61	205.6	7.0	1.0	1	0	0	1	1	1	1	Sulfocyanin	(SoxE)
NPCBM_assoc	PF10633.4	gi|449068054|ref|YP_007435136.1|	-	0.034	14.1	0.0	0.067	13.2	0.0	1.5	1	0	0	1	1	1	0	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
FMO-like	PF00743.14	gi|449068055|ref|YP_007435137.1|	-	0.41	8.7	2.0	0.47	8.5	1.4	1.0	1	0	0	1	1	1	0	Flavin-binding	monooxygenase-like
DUF2107	PF09880.4	gi|449068055|ref|YP_007435137.1|	-	8.8	6.2	10.2	26	4.7	7.1	1.7	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2107)
MFS_1	PF07690.11	gi|449068056|ref|YP_007435138.1|	-	1.1e-20	73.6	39.4	5.8e-16	58.1	13.4	2.0	2	0	0	2	2	2	2	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|449068056|ref|YP_007435138.1|	-	0.0023	16.1	0.3	0.004	15.3	0.2	1.4	1	0	0	1	1	1	1	Transmembrane	secretion	effector
DUF2542	PF10808.3	gi|449068056|ref|YP_007435138.1|	-	2.9	8.2	6.7	5	7.4	0.0	3.4	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2542)
Fer4_10	PF13237.1	gi|449068057|ref|YP_007435139.1|	-	6.6e-08	32.2	5.0	1.1e-07	31.5	3.5	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|449068057|ref|YP_007435139.1|	-	3.8e-06	27.0	7.1	7.8e-06	26.0	4.4	1.9	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|449068057|ref|YP_007435139.1|	-	4.4e-05	23.7	15.8	0.00072	19.8	6.4	2.4	2	1	2	4	4	3	3	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|449068057|ref|YP_007435139.1|	-	0.00061	19.7	4.5	0.022	14.7	4.1	2.5	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|449068057|ref|YP_007435139.1|	-	0.0024	17.6	10.9	0.23	11.3	1.3	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|449068057|ref|YP_007435139.1|	-	0.0046	16.8	7.8	0.51	10.3	1.6	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|449068057|ref|YP_007435139.1|	-	0.0068	17.1	2.3	0.39	11.5	0.0	2.4	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.1	gi|449068057|ref|YP_007435139.1|	-	0.012	15.4	5.0	0.027	14.3	3.5	1.6	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_11	PF13247.1	gi|449068057|ref|YP_007435139.1|	-	0.015	15.1	2.0	0.03	14.1	1.4	1.4	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
DUF999	PF06198.6	gi|449068057|ref|YP_007435139.1|	-	0.062	13.0	0.5	0.14	11.9	0.4	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF999)
Fer4_17	PF13534.1	gi|449068057|ref|YP_007435139.1|	-	0.089	13.1	7.2	9.2	6.7	5.1	2.6	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|449068057|ref|YP_007435139.1|	-	0.092	12.3	10.4	0.052	13.1	0.6	2.9	2	1	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|449068057|ref|YP_007435139.1|	-	0.34	11.3	7.1	2.6	8.6	1.2	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_20	PF14691.1	gi|449068057|ref|YP_007435139.1|	-	0.55	9.8	5.3	0.17	11.5	0.8	2.0	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_3	PF12798.2	gi|449068057|ref|YP_007435139.1|	-	1.5	9.5	13.9	0.18	12.4	1.7	2.7	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Nitrate_red_del	PF02613.10	gi|449068059|ref|YP_007435141.1|	-	2.2e-08	33.9	0.0	5.4e-08	32.7	0.0	1.5	1	1	0	1	1	1	1	Nitrate	reductase	delta	subunit
Fer4_11	PF13247.1	gi|449068060|ref|YP_007435142.1|	-	2.3e-23	81.9	12.0	3.2e-23	81.4	6.2	2.1	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|449068060|ref|YP_007435142.1|	-	3.8e-13	49.4	23.9	1.4e-08	34.8	6.7	3.0	2	1	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|449068060|ref|YP_007435142.1|	-	3.8e-11	43.1	22.9	2.8e-05	24.4	5.6	2.9	2	1	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|449068060|ref|YP_007435142.1|	-	1.8e-09	37.2	21.5	1.7e-05	24.5	4.5	2.8	2	1	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|449068060|ref|YP_007435142.1|	-	1.6e-07	30.7	29.5	1.6e-05	24.5	1.3	4.6	5	0	0	5	5	5	3	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|449068060|ref|YP_007435142.1|	-	8.7e-06	25.6	32.7	0.00048	20.2	1.7	4.7	5	0	0	5	5	5	3	4Fe-4S	binding	domain
Fer4	PF00037.22	gi|449068060|ref|YP_007435142.1|	-	6.4e-05	22.3	3.5	6.4e-05	22.3	2.5	4.3	4	0	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|449068060|ref|YP_007435142.1|	-	0.00029	20.5	2.1	0.00029	20.5	1.5	4.9	5	0	0	5	5	5	2	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|449068060|ref|YP_007435142.1|	-	0.0004	20.3	22.1	0.0029	17.6	3.3	3.1	2	2	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|449068060|ref|YP_007435142.1|	-	0.0031	17.8	22.1	0.19	12.0	0.2	3.7	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|449068060|ref|YP_007435142.1|	-	0.013	16.0	39.2	0.31	11.6	2.5	4.3	4	0	0	4	4	4	0	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|449068060|ref|YP_007435142.1|	-	0.052	13.9	16.7	0.29	11.5	1.5	3.6	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|449068060|ref|YP_007435142.1|	-	3.8	7.4	29.2	0.4	10.5	0.2	3.8	4	1	1	5	5	4	0	4Fe-4S	dicluster	domain
Molybdopterin	PF00384.17	gi|449068061|ref|YP_007435143.1|	-	0.00026	19.8	0.0	0.71	8.5	0.0	3.2	4	0	0	4	4	4	2	Molybdopterin	oxidoreductase
TAT_signal	PF10518.4	gi|449068061|ref|YP_007435143.1|	-	0.0098	15.8	0.1	0.027	14.4	0.1	1.8	1	0	0	1	1	1	1	TAT	(twin-arginine	translocation)	pathway	signal	sequence
Molybdop_Fe4S4	PF04879.11	gi|449068061|ref|YP_007435143.1|	-	0.055	13.2	0.4	0.12	12.2	0.3	1.5	1	0	0	1	1	1	0	Molybdopterin	oxidoreductase	Fe4S4	domain
TrmB	PF01978.14	gi|449068062|ref|YP_007435144.1|	-	0.002	17.7	0.0	0.0047	16.5	0.0	1.6	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HVSL	PF09749.4	gi|449068062|ref|YP_007435144.1|	-	0.0092	15.0	0.0	0.011	14.7	0.0	1.2	1	0	0	1	1	1	1	Uncharacterised	conserved	protein
MarR_2	PF12802.2	gi|449068062|ref|YP_007435144.1|	-	0.042	13.5	0.1	0.1	12.2	0.0	1.6	2	0	0	2	2	2	0	MarR	family
HTH_36	PF13730.1	gi|449068062|ref|YP_007435144.1|	-	0.07	13.2	0.0	0.31	11.2	0.0	2.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
DUF2999	PF11212.3	gi|449068063|ref|YP_007435145.1|	-	0.09	12.8	0.1	3.4	7.7	0.0	2.9	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2999)
TPR_11	PF13414.1	gi|449068064|ref|YP_007435146.1|	-	1.2e-25	88.9	7.9	9e-09	34.8	0.1	4.8	2	1	1	4	4	4	4	TPR	repeat
TPR_2	PF07719.12	gi|449068064|ref|YP_007435146.1|	-	2.8e-19	67.4	12.8	0.012	15.4	0.0	7.1	6	1	1	7	7	7	5	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|449068064|ref|YP_007435146.1|	-	1.2e-18	67.2	0.0	8.3e-06	26.3	0.0	4.1	4	0	0	4	4	4	3	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|449068064|ref|YP_007435146.1|	-	8.4e-17	61.2	1.8	2.9e-08	33.9	0.0	3.9	2	1	1	4	4	4	2	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|449068064|ref|YP_007435146.1|	-	9e-16	57.7	11.3	0.00023	21.2	0.4	4.1	2	1	2	4	4	4	3	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_14	PF13428.1	gi|449068064|ref|YP_007435146.1|	-	1.3e-12	47.1	0.0	0.091	13.4	0.0	5.9	3	1	3	6	6	6	4	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|449068064|ref|YP_007435146.1|	-	2.9e-11	42.2	17.3	0.055	13.2	0.1	7.2	4	2	3	7	7	7	3	Tetratricopeptide	repeat
TPR_9	PF13371.1	gi|449068064|ref|YP_007435146.1|	-	3.8e-11	42.6	0.1	3e-07	30.1	0.0	4.1	1	1	2	3	3	3	1	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|449068064|ref|YP_007435146.1|	-	1.2e-09	37.9	10.8	0.095	12.6	0.0	5.2	1	1	3	4	4	4	3	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|449068064|ref|YP_007435146.1|	-	4.2e-09	35.6	14.5	0.46	10.1	0.2	6.4	6	0	0	6	6	6	4	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|449068064|ref|YP_007435146.1|	-	2.9e-07	30.1	13.2	1.9	8.8	0.0	7.1	7	1	0	7	7	7	2	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|449068064|ref|YP_007435146.1|	-	8e-06	25.9	6.6	3.5	8.2	0.0	6.5	7	0	0	7	7	7	1	Tetratricopeptide	repeat
TPR_15	PF13429.1	gi|449068064|ref|YP_007435146.1|	-	2.8e-05	23.3	0.1	6.9	5.6	0.0	4.3	2	1	2	5	5	5	0	Tetratricopeptide	repeat
NARP1	PF12569.3	gi|449068064|ref|YP_007435146.1|	-	4.9e-05	22.2	1.9	0.0045	15.8	0.3	2.5	1	1	1	2	2	2	2	NMDA	receptor-regulated	protein	1
ChAPs	PF09295.5	gi|449068064|ref|YP_007435146.1|	-	5.3e-05	22.1	0.2	0.0075	15.0	0.0	2.1	1	1	1	2	2	2	1	ChAPs	(Chs5p-Arf1p-binding	proteins)
YfdX	PF10938.3	gi|449068064|ref|YP_007435146.1|	-	9.4e-05	22.1	0.4	4.7	6.8	0.0	3.9	2	2	1	3	3	3	2	YfdX	protein
TPR_20	PF14561.1	gi|449068064|ref|YP_007435146.1|	-	0.00011	22.2	0.2	2.1	8.5	0.0	3.9	2	1	3	5	5	5	2	Tetratricopeptide	repeat
SHNi-TPR	PF10516.4	gi|449068064|ref|YP_007435146.1|	-	0.00046	19.3	0.1	8.5	5.7	0.0	4.4	4	0	0	4	4	4	0	SHNi-TPR
TPR_21	PF09976.4	gi|449068064|ref|YP_007435146.1|	-	0.0026	17.6	0.0	0.51	10.2	0.0	3.1	1	1	2	3	3	3	1	Tetratricopeptide	repeat
DUF3856	PF12968.2	gi|449068064|ref|YP_007435146.1|	-	0.011	15.5	0.1	0.53	10.1	0.0	2.7	2	0	0	2	2	2	0	Domain	of	Unknown	Function	(DUF3856)
FAT	PF02259.18	gi|449068064|ref|YP_007435146.1|	-	0.012	14.6	0.1	0.022	13.7	0.1	1.4	1	1	0	1	1	1	0	FAT	domain
Alkyl_sulf_dimr	PF14863.1	gi|449068064|ref|YP_007435146.1|	-	0.012	15.8	0.0	0.6	10.3	0.0	2.6	2	0	0	2	2	2	0	Alkyl	sulfatase	dimerisation
DUF4249	PF14054.1	gi|449068064|ref|YP_007435146.1|	-	0.025	13.9	0.0	0.035	13.4	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4249)
DUF357	PF04010.8	gi|449068064|ref|YP_007435146.1|	-	0.063	12.9	3.3	1.9	8.2	0.6	3.9	4	1	0	4	4	3	0	Protein	of	unknown	function	(DUF357)
TPR_7	PF13176.1	gi|449068064|ref|YP_007435146.1|	-	0.073	12.9	0.5	27	4.8	0.0	4.0	4	0	0	4	4	3	0	Tetratricopeptide	repeat
MIT	PF04212.13	gi|449068064|ref|YP_007435146.1|	-	0.075	12.9	3.5	4.4	7.2	0.0	4.4	5	1	0	5	5	4	0	MIT	(microtubule	interacting	and	transport)	domain
Fer4_7	PF12838.2	gi|449068065|ref|YP_007435147.1|	-	2.3e-10	40.6	13.0	0.0004	20.6	0.4	3.6	3	1	0	3	3	3	3	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|449068065|ref|YP_007435147.1|	-	2.4e-08	33.2	30.1	5.4e-05	22.6	2.9	4.6	5	0	0	5	5	5	3	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|449068065|ref|YP_007435147.1|	-	3.8e-07	29.8	16.8	4.8e-05	23.0	5.1	3.6	2	1	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|449068065|ref|YP_007435147.1|	-	1.5e-06	27.9	4.7	1.5e-06	27.9	3.3	2.8	3	0	0	3	3	2	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|449068065|ref|YP_007435147.1|	-	2.4e-06	27.1	29.6	0.001	18.8	3.4	4.3	5	0	0	5	5	5	3	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|449068065|ref|YP_007435147.1|	-	1.3e-05	25.4	6.5	1.3e-05	25.4	4.5	3.7	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|449068065|ref|YP_007435147.1|	-	4e-05	23.2	27.6	0.0014	18.4	2.1	4.5	5	0	0	5	5	4	3	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|449068065|ref|YP_007435147.1|	-	0.00013	21.9	15.1	0.00027	20.9	4.2	3.1	2	1	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|449068065|ref|YP_007435147.1|	-	0.0041	17.6	13.5	0.065	13.8	5.4	3.4	2	1	0	2	2	2	1	4Fe-4S	single	cluster	domain
CRAL_TRIO	PF00650.15	gi|449068065|ref|YP_007435147.1|	-	0.049	13.1	0.0	0.13	11.7	0.0	1.7	1	0	0	1	1	1	0	CRAL/TRIO	domain
Fer4_18	PF13746.1	gi|449068065|ref|YP_007435147.1|	-	0.051	13.9	0.5	0.051	13.9	0.3	3.3	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|449068065|ref|YP_007435147.1|	-	0.06	13.6	18.0	0.86	9.9	0.9	4.3	2	1	2	4	4	4	0	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|449068065|ref|YP_007435147.1|	-	0.16	12.7	14.3	1.1	10.0	2.7	3.7	3	1	0	3	3	3	0	4Fe-4S	double	cluster	binding	domain
Fer4_13	PF13370.1	gi|449068065|ref|YP_007435147.1|	-	0.94	9.9	13.7	13	6.3	0.3	3.4	2	1	0	2	2	2	0	4Fe-4S	single	cluster	domain
HAD_2	PF13419.1	gi|449068066|ref|YP_007435148.1|	-	5.1e-09	36.6	0.0	7e-09	36.1	0.0	1.2	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
DUF2299	PF10061.4	gi|449068067|ref|YP_007435149.1|	-	1.8e-40	137.6	0.9	2.1e-40	137.3	0.6	1.1	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2299)
NrfD	PF03916.9	gi|449068068|ref|YP_007435150.1|	-	1.7e-12	47.3	30.1	6.3e-12	45.5	17.8	2.2	2	0	0	2	2	2	2	Polysulphide	reductase,	NrfD
DmsC	PF04976.7	gi|449068068|ref|YP_007435150.1|	-	0.043	13.0	23.0	0.013	14.8	13.6	1.8	2	1	0	2	2	2	0	DMSO	reductase	anchor	subunit	(DmsC)
MFS_1	PF07690.11	gi|449068069|ref|YP_007435151.1|	-	1.4e-16	60.2	39.1	1.4e-16	60.2	27.1	1.4	1	1	0	1	1	1	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|449068069|ref|YP_007435151.1|	-	5.1e-13	48.4	31.8	1.1e-12	47.3	22.0	1.6	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
ISK_Channel	PF02060.10	gi|449068069|ref|YP_007435151.1|	-	0.011	15.3	1.2	0.034	13.7	0.0	2.3	2	0	0	2	2	2	0	Slow	voltage-gated	potassium	channel
DUF760	PF05542.6	gi|449068069|ref|YP_007435151.1|	-	0.14	12.3	0.1	3.7	7.8	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF760)
MFS_1	PF07690.11	gi|449068070|ref|YP_007435152.1|	-	1.8e-42	145.3	70.2	1.5e-27	96.2	13.5	3.4	1	1	1	3	3	3	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|449068070|ref|YP_007435152.1|	-	1.1e-06	27.5	38.5	1.7e-05	23.6	9.3	3.5	3	0	0	3	3	3	2	Sugar	(and	other)	transporter
MFS_3	PF05977.8	gi|449068070|ref|YP_007435152.1|	-	4.5e-05	21.7	1.7	4.5e-05	21.7	1.2	2.2	2	0	0	2	2	2	1	Transmembrane	secretion	effector
PUCC	PF03209.10	gi|449068070|ref|YP_007435152.1|	-	5.1e-05	22.1	3.5	5.1e-05	22.1	2.5	3.0	3	1	0	3	3	3	1	PUCC	protein
MarR	PF01047.17	gi|449068071|ref|YP_007435153.1|	-	1.2e-11	44.0	0.0	2.1e-11	43.3	0.0	1.5	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.1	gi|449068071|ref|YP_007435153.1|	-	1.5e-09	38.0	0.1	2.8e-09	37.1	0.1	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|449068071|ref|YP_007435153.1|	-	6.1e-09	35.4	0.0	9.5e-09	34.8	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_34	PF13601.1	gi|449068071|ref|YP_007435153.1|	-	0.00019	21.4	0.1	0.0029	17.6	0.0	2.2	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|449068071|ref|YP_007435153.1|	-	0.00037	20.1	0.1	0.00077	19.1	0.1	1.6	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HxlR	PF01638.12	gi|449068071|ref|YP_007435153.1|	-	0.0024	17.4	0.1	0.0046	16.5	0.1	1.6	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
Fe_dep_repress	PF01325.14	gi|449068071|ref|YP_007435153.1|	-	0.0075	16.1	0.0	0.019	14.8	0.0	1.7	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DUF4423	PF14394.1	gi|449068071|ref|YP_007435153.1|	-	0.017	14.6	0.1	0.26	10.8	0.0	2.2	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4423)
HTH_20	PF12840.2	gi|449068071|ref|YP_007435153.1|	-	0.024	14.4	0.0	0.06	13.1	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
Cdc6_C	PF09079.6	gi|449068071|ref|YP_007435153.1|	-	0.025	14.2	0.4	0.63	9.8	0.1	2.3	1	1	1	2	2	2	0	CDC6,	C	terminal
HTH_24	PF13412.1	gi|449068071|ref|YP_007435153.1|	-	0.038	13.3	0.1	0.21	11.0	0.0	2.4	2	1	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
DUF2250	PF10007.4	gi|449068071|ref|YP_007435153.1|	-	0.063	13.1	0.4	0.26	11.2	0.0	2.2	2	1	1	3	3	3	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
MFS_1	PF07690.11	gi|449068072|ref|YP_007435154.1|	-	3.5e-47	160.8	42.3	1.6e-30	106.0	14.0	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_2	PF13347.1	gi|449068072|ref|YP_007435154.1|	-	7e-08	31.2	29.2	0.00012	20.6	9.2	2.7	3	0	0	3	3	3	2	MFS/sugar	transport	protein
HTH_24	PF13412.1	gi|449068073|ref|YP_007435155.1|	-	4.2e-19	67.6	4.3	2.5e-13	49.1	0.2	2.3	2	0	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|449068073|ref|YP_007435155.1|	-	1.9e-12	46.4	0.7	8.4e-09	34.8	0.1	2.2	2	0	0	2	2	2	2	AsnC-type	helix-turn-helix	domain
MarR	PF01047.17	gi|449068073|ref|YP_007435155.1|	-	1.6e-06	27.7	0.0	0.0068	16.0	0.0	2.3	2	0	0	2	2	2	2	MarR	family
MarR_2	PF12802.2	gi|449068073|ref|YP_007435155.1|	-	2.4e-05	23.9	0.0	0.00093	18.8	0.0	2.2	2	0	0	2	2	2	1	MarR	family
TFIIE_alpha	PF02002.12	gi|449068073|ref|YP_007435155.1|	-	7.5e-05	22.1	0.5	0.16	11.5	0.0	3.0	3	0	0	3	3	3	2	TFIIE	alpha	subunit
TrmB	PF01978.14	gi|449068073|ref|YP_007435155.1|	-	0.00015	21.3	0.1	0.2	11.3	0.0	2.6	3	0	0	3	3	3	2	Sugar-specific	transcriptional	regulator	TrmB
HTH_5	PF01022.15	gi|449068073|ref|YP_007435155.1|	-	0.00054	19.5	0.0	0.52	10.0	0.0	2.4	2	0	0	2	2	2	2	Bacterial	regulatory	protein,	arsR	family
HTH_Mga	PF08280.6	gi|449068073|ref|YP_007435155.1|	-	0.0044	16.7	0.1	0.042	13.6	0.0	2.5	3	0	0	3	3	3	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_17	PF12728.2	gi|449068073|ref|YP_007435155.1|	-	0.035	14.3	0.0	4.5	7.5	0.0	2.6	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_7	PF02796.10	gi|449068073|ref|YP_007435155.1|	-	0.053	13.3	0.0	3.2	7.6	0.0	2.6	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	resolvase
HTH_28	PF13518.1	gi|449068073|ref|YP_007435155.1|	-	0.075	13.0	0.0	1.7	8.7	0.0	2.3	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_38	PF13936.1	gi|449068073|ref|YP_007435155.1|	-	0.1	12.1	0.0	1.9	8.1	0.0	2.4	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_27	PF13463.1	gi|449068073|ref|YP_007435155.1|	-	0.11	12.7	0.0	15	6.0	0.0	2.3	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
HTH_psq	PF05225.11	gi|449068073|ref|YP_007435155.1|	-	0.13	11.7	0.0	0.25	10.9	0.0	1.4	1	0	0	1	1	1	0	helix-turn-helix,	Psq	domain
HTH_10	PF04967.7	gi|449068075|ref|YP_007435157.1|	-	9.9e-20	69.8	0.4	3e-19	68.3	0.1	1.9	2	0	0	2	2	2	1	HTH	DNA	binding	domain
Sigma70_r4	PF04545.11	gi|449068075|ref|YP_007435157.1|	-	1.9e-05	23.8	0.0	3.9e-05	22.8	0.0	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_27	PF13463.1	gi|449068075|ref|YP_007435157.1|	-	0.11	12.8	0.0	0.25	11.7	0.0	1.7	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
ATP-synt_E_2	PF08112.6	gi|449068075|ref|YP_007435157.1|	-	0.19	11.8	3.6	0.15	12.1	1.0	1.9	2	0	0	2	2	2	0	ATP	synthase	epsilon	subunit
DUF2682	PF10909.3	gi|449068075|ref|YP_007435157.1|	-	0.79	10.0	4.0	14	6.0	0.1	2.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2682)
Ald_Xan_dh_C2	PF02738.13	gi|449068076|ref|YP_007435158.1|	-	5.6e-124	414.4	0.0	6.7e-124	414.1	0.0	1.0	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|449068076|ref|YP_007435158.1|	-	2.6e-15	56.4	0.3	8.8e-14	51.5	0.2	2.5	1	1	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
ATP-synt_DE	PF00401.15	gi|449068076|ref|YP_007435158.1|	-	0.054	13.3	0.0	0.11	12.4	0.0	1.4	1	0	0	1	1	1	0	ATP	synthase,	Delta/Epsilon	chain,	long	alpha-helix	domain
GspH	PF12019.3	gi|449068076|ref|YP_007435158.1|	-	0.12	12.5	0.0	2	8.5	0.0	2.3	2	0	0	2	2	2	0	Type	II	transport	protein	GspH
MFS_1	PF07690.11	gi|449068077|ref|YP_007435159.1|	-	6.8e-19	67.7	61.7	8.7e-12	44.4	27.2	1.8	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Reo_sigmaC	PF04582.7	gi|449068078|ref|YP_007435160.1|	-	5.3e-12	45.5	13.3	6.5e-06	25.5	0.5	3.1	1	1	2	3	3	3	3	Reovirus	sigma	C	capsid	protein
TMF_DNA_bd	PF12329.3	gi|449068078|ref|YP_007435160.1|	-	5.1e-07	29.3	60.6	0.0014	18.3	3.0	5.7	1	1	6	7	7	7	4	TATA	element	modulatory	factor	1	DNA	binding
MbeD_MobD	PF04899.7	gi|449068078|ref|YP_007435160.1|	-	9.4e-07	28.6	10.9	0.016	15.0	0.0	5.4	1	1	6	7	7	7	1	MbeD/MobD	like
Acetyltransf_3	PF13302.1	gi|449068078|ref|YP_007435160.1|	-	5.1e-06	26.6	7.1	0.47	10.5	0.2	3.4	1	1	2	3	3	3	3	Acetyltransferase	(GNAT)	domain
Sigma70_r4	PF04545.11	gi|449068078|ref|YP_007435160.1|	-	0.00012	21.2	16.1	0.84	9.0	0.3	5.9	2	1	4	6	6	6	4	Sigma-70,	region	4
Fib_alpha	PF08702.5	gi|449068078|ref|YP_007435160.1|	-	0.00037	20.6	34.0	0.73	9.9	8.5	3.5	1	1	2	3	3	3	3	Fibrinogen	alpha/beta	chain	family
ALIX_LYPXL_bnd	PF13949.1	gi|449068078|ref|YP_007435160.1|	-	0.00039	19.4	33.2	0.018	14.0	12.8	2.2	1	1	1	2	2	2	2	ALIX	V-shaped	domain	binding	to	HIV
NOC3p	PF07540.6	gi|449068078|ref|YP_007435160.1|	-	0.00077	19.6	25.2	2.9	8.2	0.2	6.6	1	1	5	6	6	6	0	Nucleolar	complex-associated	protein
MCPsignal	PF00015.16	gi|449068078|ref|YP_007435160.1|	-	0.002	17.7	33.0	0.054	13.0	0.4	3.0	1	1	2	3	3	3	1	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
ARGLU	PF15346.1	gi|449068078|ref|YP_007435160.1|	-	0.0026	17.5	56.5	0.11	12.2	15.3	3.2	1	1	2	3	3	3	3	Arginine	and	glutamate-rich	1
Myosin_tail_1	PF01576.14	gi|449068078|ref|YP_007435160.1|	-	0.0031	15.3	50.5	0.016	12.9	33.1	1.9	1	1	1	2	2	2	2	Myosin	tail
Mt_ATP-synt_B	PF05405.9	gi|449068078|ref|YP_007435160.1|	-	0.0092	15.4	2.2	0.0092	15.4	1.6	3.3	1	1	1	3	3	3	1	Mitochondrial	ATP	synthase	B	chain	precursor	(ATP-synt_B)
Seryl_tRNA_N	PF02403.17	gi|449068078|ref|YP_007435160.1|	-	0.0099	15.8	47.7	0.32	11.0	13.3	3.8	1	1	2	3	3	3	2	Seryl-tRNA	synthetase	N-terminal	domain
TelA	PF05816.6	gi|449068078|ref|YP_007435160.1|	-	0.017	13.8	35.8	0.87	8.2	14.4	3.3	1	1	1	2	2	2	0	Toxic	anion	resistance	protein	(TelA)
TMP_2	PF06791.8	gi|449068078|ref|YP_007435160.1|	-	0.024	14.2	19.5	4.1	6.9	0.5	4.3	1	1	4	5	5	5	0	Prophage	tail	length	tape	measure	protein
Filament	PF00038.16	gi|449068078|ref|YP_007435160.1|	-	0.03	13.8	38.4	0.044	13.2	26.6	1.2	1	0	0	1	1	1	0	Intermediate	filament	protein
DUF812	PF05667.6	gi|449068078|ref|YP_007435160.1|	-	0.053	12.0	37.7	0.075	11.5	26.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF812)
CCDC155	PF14662.1	gi|449068078|ref|YP_007435160.1|	-	0.063	12.8	46.4	0.051	13.1	19.4	2.6	1	1	1	2	2	2	0	Coiled-coil	region	of	CCDC155
L27	PF02828.11	gi|449068078|ref|YP_007435160.1|	-	0.075	12.7	7.4	51	3.6	0.0	6.2	7	0	0	7	7	7	0	L27	domain
Spc7	PF08317.6	gi|449068078|ref|YP_007435160.1|	-	0.098	11.3	45.6	2.8	6.5	12.3	2.6	1	1	1	2	2	2	0	Spc7	kinetochore	protein
TusA	PF01206.12	gi|449068078|ref|YP_007435160.1|	-	0.14	11.7	2.6	0.74	9.4	0.0	3.3	2	1	2	4	4	4	0	Sulfurtransferase	TusA
ATG16	PF08614.6	gi|449068078|ref|YP_007435160.1|	-	0.16	11.7	42.6	0.81	9.4	8.6	3.3	1	1	2	3	3	3	0	Autophagy	protein	16	(ATG16)
HAUS-augmin3	PF14932.1	gi|449068078|ref|YP_007435160.1|	-	0.24	10.5	39.2	6.3	5.9	9.8	2.8	1	1	2	3	3	3	0	HAUS	augmin-like	complex	subunit	3
Syntaxin_2	PF14523.1	gi|449068078|ref|YP_007435160.1|	-	0.29	11.1	37.3	30	4.7	1.8	4.9	1	1	1	2	2	1	0	Syntaxin-like	protein
TMPIT	PF07851.8	gi|449068078|ref|YP_007435160.1|	-	0.3	10.1	32.6	2.4	7.1	7.5	3.1	1	1	2	3	3	3	0	TMPIT-like	protein
NanE	PF04131.9	gi|449068078|ref|YP_007435160.1|	-	0.44	9.5	10.8	0.65	8.9	0.7	3.3	1	1	2	3	3	3	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
DUF2935	PF11155.3	gi|449068078|ref|YP_007435160.1|	-	0.48	10.5	27.3	11	6.1	5.1	3.8	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF2935)
AAA_27	PF13514.1	gi|449068078|ref|YP_007435160.1|	-	0.53	7.9	30.8	0.83	7.2	21.4	1.3	1	0	0	1	1	1	0	AAA	domain
Atx10homo_assoc	PF09759.4	gi|449068078|ref|YP_007435160.1|	-	0.58	9.9	24.5	2.6	7.8	0.9	4.8	1	1	5	6	6	6	0	Spinocerebellar	ataxia	type	10	protein	domain
IFT20	PF14931.1	gi|449068078|ref|YP_007435160.1|	-	0.74	9.7	32.8	3.3	7.6	0.9	4.6	1	1	4	5	5	5	0	Intraflagellar	transport	complex	B,	subunit	20
HOOK	PF05622.7	gi|449068078|ref|YP_007435160.1|	-	0.75	7.5	37.8	14	3.3	26.0	2.0	1	1	0	1	1	1	0	HOOK	protein
MscS_porin	PF12795.2	gi|449068078|ref|YP_007435160.1|	-	0.81	8.9	35.8	1.4	8.1	7.1	2.8	1	1	2	3	3	3	0	Mechanosensitive	ion	channel	porin	domain
DUF4200	PF13863.1	gi|449068078|ref|YP_007435160.1|	-	0.92	9.4	57.9	1.1	9.1	11.5	3.6	2	1	3	5	5	4	0	Domain	of	unknown	function	(DUF4200)
Lebercilin	PF15619.1	gi|449068078|ref|YP_007435160.1|	-	0.95	8.8	45.9	0.51	9.7	13.5	3.4	1	1	1	2	2	2	0	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
DUF4201	PF13870.1	gi|449068078|ref|YP_007435160.1|	-	1.1	8.7	48.1	7.9	5.8	14.8	3.5	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF4201)
DUF2584	PF10763.4	gi|449068078|ref|YP_007435160.1|	-	1.1	9.1	26.2	3.9	7.3	0.4	5.5	1	1	5	6	6	6	0	Protein	of	unknown	function	(DUF2584)
Transposase_22	PF02994.9	gi|449068078|ref|YP_007435160.1|	-	1.2	7.5	51.0	0.027	12.9	11.9	3.2	1	1	2	3	3	3	0	L1	transposable	element
DDE_Tnp_1	PF01609.16	gi|449068078|ref|YP_007435160.1|	-	1.3	8.5	14.0	3.3e+02	0.6	9.7	2.7	1	1	0	1	1	1	0	Transposase	DDE	domain
CcdA	PF07362.7	gi|449068078|ref|YP_007435160.1|	-	1.4	8.8	26.8	41	4.1	0.3	6.7	2	1	5	7	7	7	0	Post-segregation	antitoxin	CcdA
AAA_13	PF13166.1	gi|449068078|ref|YP_007435160.1|	-	1.9	6.8	44.2	0.39	9.1	22.6	2.0	1	1	1	2	2	2	0	AAA	domain
DUF148	PF02520.12	gi|449068078|ref|YP_007435160.1|	-	2	8.2	36.2	2.8	7.7	3.4	4.8	1	1	4	5	5	4	0	Domain	of	unknown	function	DUF148
Atg14	PF10186.4	gi|449068078|ref|YP_007435160.1|	-	2.1	7.2	41.1	1.5	7.6	11.1	2.6	1	1	1	2	2	2	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
T2SF	PF00482.18	gi|449068078|ref|YP_007435160.1|	-	2.2	8.2	7.3	0.35	10.7	0.4	2.6	2	1	0	2	2	2	0	Type	II	secretion	system	(T2SS),	protein	F
Ada3	PF10198.4	gi|449068078|ref|YP_007435160.1|	-	2.2	8.0	37.7	2.9	7.6	1.0	6.1	1	1	5	6	6	6	0	Histone	acetyltransferases	subunit	3
TPR_MLP1_2	PF07926.7	gi|449068078|ref|YP_007435160.1|	-	2.3	7.9	44.8	11	5.7	12.2	3.8	1	1	3	4	4	4	0	TPR/MLP1/MLP2-like	protein
TC1	PF15063.1	gi|449068078|ref|YP_007435160.1|	-	2.6	7.6	27.4	16	5.1	0.1	5.8	1	1	9	10	10	10	0	Thyroid	cancer	protein	1
Y_phosphatase3	PF13350.1	gi|449068078|ref|YP_007435160.1|	-	3.2	7.9	14.8	4.9	7.3	4.0	2.7	1	1	1	2	2	2	0	Tyrosine	phosphatase	family
DUF1759	PF03564.10	gi|449068078|ref|YP_007435160.1|	-	3.2	7.5	29.0	6.1	6.6	1.3	4.2	1	1	3	4	4	4	0	Protein	of	unknown	function	(DUF1759)
HemX	PF04375.9	gi|449068078|ref|YP_007435160.1|	-	4.3	5.8	27.7	0.39	9.2	0.5	3.9	1	1	4	5	5	5	0	HemX
DUF1039	PF06287.6	gi|449068078|ref|YP_007435160.1|	-	4.5	7.2	16.2	1.3e+02	2.5	0.1	5.9	6	0	0	6	6	6	0	Protein	of	unknown	function	(DUF1039)
AATF-Che1	PF13339.1	gi|449068078|ref|YP_007435160.1|	-	6.4	6.9	29.7	17	5.5	4.0	3.6	1	1	2	3	3	2	0	Apoptosis	antagonizing	transcription	factor
TerB-N	PF13208.1	gi|449068078|ref|YP_007435160.1|	-	6.5	6.1	7.0	46	3.3	4.8	2.2	1	1	0	1	1	1	0	TerB-N
YccJ	PF13993.1	gi|449068078|ref|YP_007435160.1|	-	6.8	6.8	20.5	60	3.8	0.2	5.5	1	1	5	6	6	6	0	YccJ-like	protein
ABC_tran	PF00005.22	gi|449068079|ref|YP_007435161.1|	-	2.8e-29	102.1	0.0	5.1e-29	101.3	0.0	1.4	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|449068079|ref|YP_007435161.1|	-	1.2e-12	48.4	0.2	1.1e-11	45.2	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|449068079|ref|YP_007435161.1|	-	1.1e-07	31.2	2.4	7.7e-07	28.5	1.5	2.0	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|449068079|ref|YP_007435161.1|	-	3.4e-05	23.2	0.1	6.4e-05	22.3	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.1	gi|449068079|ref|YP_007435161.1|	-	3.5e-05	23.0	0.3	0.0035	16.4	0.6	2.2	1	1	0	2	2	2	1	AAA	ATPase	domain
AAA_10	PF12846.2	gi|449068079|ref|YP_007435161.1|	-	5.1e-05	22.8	0.1	0.14	11.5	0.0	2.1	2	0	0	2	2	2	2	AAA-like	domain
ABC_ATPase	PF09818.4	gi|449068079|ref|YP_007435161.1|	-	5.2e-05	22.0	0.8	0.025	13.1	0.0	2.6	2	1	0	2	2	2	2	Predicted	ATPase	of	the	ABC	class
AAA_23	PF13476.1	gi|449068079|ref|YP_007435161.1|	-	0.00011	22.6	1.6	0.00056	20.3	1.1	2.0	1	1	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|449068079|ref|YP_007435161.1|	-	0.0014	17.8	0.1	0.0022	17.2	0.1	1.6	1	1	0	1	1	1	1	Protein	of	unknown	function,	DUF258
UPF0079	PF02367.12	gi|449068079|ref|YP_007435161.1|	-	0.0029	17.2	0.1	0.011	15.3	0.0	1.9	2	0	0	2	2	2	1	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_16	PF13191.1	gi|449068079|ref|YP_007435161.1|	-	0.013	15.4	0.0	0.02	14.8	0.0	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
Miro	PF08477.8	gi|449068079|ref|YP_007435161.1|	-	0.017	15.5	0.0	0.043	14.3	0.0	1.9	1	1	0	1	1	1	0	Miro-like	protein
AAA_30	PF13604.1	gi|449068079|ref|YP_007435161.1|	-	0.072	12.6	0.0	0.31	10.5	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
ATP-synt_ab	PF00006.20	gi|449068079|ref|YP_007435161.1|	-	0.1	12.0	0.0	0.29	10.5	0.0	1.7	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_19	PF13245.1	gi|449068079|ref|YP_007435161.1|	-	0.12	12.1	0.0	0.92	9.2	0.0	2.2	2	0	0	2	2	2	0	Part	of	AAA	domain
MMR_HSR1	PF01926.18	gi|449068079|ref|YP_007435161.1|	-	0.16	11.9	0.8	0.33	10.9	0.6	1.9	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
KaiC	PF06745.8	gi|449068079|ref|YP_007435161.1|	-	1.8	7.6	5.9	14	4.7	0.1	2.4	2	1	0	2	2	2	0	KaiC
BPD_transp_2	PF02653.11	gi|449068080|ref|YP_007435162.1|	-	2.6e-31	108.5	37.0	3.7e-31	108.0	25.6	1.2	1	0	0	1	1	1	1	Branched-chain	amino	acid	transport	system	/	permease	component
Cytochrom_B_C	PF00032.12	gi|449068080|ref|YP_007435162.1|	-	6.8	6.9	9.1	1.7	8.8	0.6	2.9	2	1	1	3	3	3	0	Cytochrome	b(C-terminal)/b6/petD
Peripla_BP_4	PF13407.1	gi|449068081|ref|YP_007435163.1|	-	4.8e-46	157.1	0.1	8.3e-46	156.4	0.1	1.3	1	0	0	1	1	1	1	Periplasmic	binding	protein	domain
Peripla_BP_1	PF00532.16	gi|449068081|ref|YP_007435163.1|	-	5.4e-05	22.5	0.0	8.7e-05	21.8	0.0	1.3	1	0	0	1	1	1	1	Periplasmic	binding	proteins	and	sugar	binding	domain	of	LacI	family
DUF1854	PF08909.6	gi|449068082|ref|YP_007435164.1|	-	1.9e-42	143.9	1.0	4.2e-42	142.9	0.2	2.1	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1854)
ABC_membrane	PF00664.18	gi|449068082|ref|YP_007435164.1|	-	8.3e-40	136.9	9.8	1.1e-39	136.4	6.8	1.2	1	0	0	1	1	1	1	ABC	transporter	transmembrane	region
ABC_tran	PF00005.22	gi|449068082|ref|YP_007435164.1|	-	1.4e-34	119.3	0.0	3e-34	118.2	0.0	1.6	1	0	0	1	1	1	1	ABC	transporter
ABC_membrane_3	PF13748.1	gi|449068082|ref|YP_007435164.1|	-	4.3e-06	25.9	3.4	4.3e-06	25.9	2.3	2.1	2	0	0	2	2	2	1	ABC	transporter	transmembrane	region
SMC_N	PF02463.14	gi|449068082|ref|YP_007435164.1|	-	7.5e-06	25.3	0.7	0.0023	17.2	0.0	2.5	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
AAA_10	PF12846.2	gi|449068082|ref|YP_007435164.1|	-	2.2e-05	24.0	0.0	0.053	12.9	0.0	3.6	4	1	0	4	4	4	1	AAA-like	domain
AAA_17	PF13207.1	gi|449068082|ref|YP_007435164.1|	-	2.6e-05	25.0	0.5	0.00011	23.0	0.1	2.4	2	0	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|449068082|ref|YP_007435164.1|	-	0.0004	20.5	2.3	0.052	13.6	0.2	3.8	3	1	1	4	4	3	1	AAA	domain
AAA_18	PF13238.1	gi|449068082|ref|YP_007435164.1|	-	0.0007	19.9	0.5	0.0037	17.5	0.3	2.5	1	1	0	1	1	1	1	AAA	domain
DUF87	PF01935.12	gi|449068082|ref|YP_007435164.1|	-	0.0017	18.1	0.1	0.0082	15.9	0.1	2.2	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF87
AAA_29	PF13555.1	gi|449068082|ref|YP_007435164.1|	-	0.0021	17.5	0.1	0.0058	16.1	0.1	1.7	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA	PF00004.24	gi|449068082|ref|YP_007435164.1|	-	0.0076	16.4	0.4	0.96	9.6	0.0	3.2	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
RNA_helicase	PF00910.17	gi|449068082|ref|YP_007435164.1|	-	0.022	14.9	0.3	0.64	10.2	0.0	2.6	2	0	0	2	2	2	0	RNA	helicase
DUF258	PF03193.11	gi|449068082|ref|YP_007435164.1|	-	0.029	13.5	0.0	0.058	12.5	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_25	PF13481.1	gi|449068082|ref|YP_007435164.1|	-	0.041	13.2	0.0	0.23	10.8	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
MobB	PF03205.9	gi|449068082|ref|YP_007435164.1|	-	0.05	13.3	2.1	0.11	12.1	0.1	2.3	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
FtsK_SpoIIIE	PF01580.13	gi|449068082|ref|YP_007435164.1|	-	0.052	13.0	0.0	0.12	11.8	0.0	1.5	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
MMR_HSR1	PF01926.18	gi|449068082|ref|YP_007435164.1|	-	0.065	13.1	0.4	0.22	11.4	0.3	2.1	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_16	PF13191.1	gi|449068082|ref|YP_007435164.1|	-	0.066	13.1	0.2	0.27	11.2	0.1	2.1	2	1	0	2	2	2	0	AAA	ATPase	domain
AAA_5	PF07728.9	gi|449068082|ref|YP_007435164.1|	-	0.076	12.7	0.0	0.45	10.2	0.0	2.4	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
Zeta_toxin	PF06414.7	gi|449068082|ref|YP_007435164.1|	-	0.097	11.7	0.1	0.59	9.1	0.0	2.2	2	0	0	2	2	2	0	Zeta	toxin
ATP-synt_ab	PF00006.20	gi|449068082|ref|YP_007435164.1|	-	0.14	11.6	0.0	0.79	9.1	0.0	2.1	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_23	PF13476.1	gi|449068082|ref|YP_007435164.1|	-	0.14	12.4	0.1	0.14	12.4	0.0	2.8	3	0	0	3	3	3	0	AAA	domain
AAA_33	PF13671.1	gi|449068082|ref|YP_007435164.1|	-	0.16	11.8	0.0	0.4	10.5	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
Amidohydro_2	PF04909.9	gi|449068083|ref|YP_007435165.1|	-	3.6e-29	102.1	0.2	4.9e-29	101.7	0.1	1.2	1	0	0	1	1	1	1	Amidohydrolase
CARD	PF00619.16	gi|449068084|ref|YP_007435166.1|	-	0.0008	19.2	0.2	0.0011	18.7	0.1	1.2	1	0	0	1	1	1	1	Caspase	recruitment	domain
ADH_N	PF08240.7	gi|449068085|ref|YP_007435167.1|	-	1.1e-30	105.6	0.6	3.6e-30	103.9	0.1	1.9	2	0	0	2	2	2	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|449068085|ref|YP_007435167.1|	-	2.6e-29	101.3	0.2	4.3e-29	100.6	0.1	1.3	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|449068085|ref|YP_007435167.1|	-	8.7e-13	49.2	0.3	4.7e-12	46.9	0.0	2.0	2	0	0	2	2	2	1	Zinc-binding	dehydrogenase
TrkA_N	PF02254.13	gi|449068085|ref|YP_007435167.1|	-	0.0024	17.8	0.5	0.0051	16.8	0.4	1.6	1	0	0	1	1	1	1	TrkA-N	domain
Methyltransf_31	PF13847.1	gi|449068085|ref|YP_007435167.1|	-	0.0067	16.0	0.1	0.011	15.3	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
DapB_N	PF01113.15	gi|449068085|ref|YP_007435167.1|	-	0.027	14.3	1.0	0.051	13.4	0.7	1.4	1	0	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
Methyltransf_18	PF12847.2	gi|449068085|ref|YP_007435167.1|	-	0.045	14.3	0.0	0.34	11.5	0.0	2.3	1	1	1	2	2	2	0	Methyltransferase	domain
CoA_binding	PF02629.14	gi|449068085|ref|YP_007435167.1|	-	0.057	13.9	2.6	2.1	8.8	1.7	2.6	2	1	0	2	2	2	0	CoA	binding	domain
UDPG_MGDP_dh_N	PF03721.9	gi|449068085|ref|YP_007435167.1|	-	0.11	11.8	1.4	0.17	11.2	0.5	1.7	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
NAD_binding_2	PF03446.10	gi|449068085|ref|YP_007435167.1|	-	0.14	11.9	0.9	0.32	10.8	0.3	1.7	2	0	0	2	2	2	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
MFS_1	PF07690.11	gi|449068086|ref|YP_007435168.1|	-	1.3e-24	86.6	38.8	2e-24	85.9	26.9	1.2	1	0	0	1	1	1	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|449068086|ref|YP_007435168.1|	-	2.3e-15	56.1	33.8	1.6e-08	33.5	8.9	2.7	1	1	2	3	3	3	2	Sugar	(and	other)	transporter
MFS_1_like	PF12832.2	gi|449068086|ref|YP_007435168.1|	-	0.0019	17.9	5.2	0.26	11.1	0.1	3.3	3	1	0	3	3	3	2	MFS_1	like	family
Peptidase_S58	PF03576.9	gi|449068087|ref|YP_007435169.1|	-	2.5e-28	99.2	2.2	3.9e-28	98.5	1.5	1.2	1	0	0	1	1	1	1	Peptidase	family	S58
MFS_1	PF07690.11	gi|449068088|ref|YP_007435170.1|	-	4.9e-22	78.1	68.8	1.8e-19	69.7	26.4	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|449068088|ref|YP_007435170.1|	-	5.3e-15	54.9	44.2	1.3e-11	43.8	30.6	2.0	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
adh_short_C2	PF13561.1	gi|449068089|ref|YP_007435171.1|	-	1.2e-39	136.5	0.1	1.5e-39	136.2	0.1	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|449068089|ref|YP_007435171.1|	-	2.4e-30	105.6	0.0	3.5e-30	105.1	0.0	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|449068089|ref|YP_007435171.1|	-	1.8e-14	53.8	0.0	2.5e-14	53.3	0.0	1.1	1	0	0	1	1	1	1	KR	domain
3HCDH_N	PF02737.13	gi|449068089|ref|YP_007435171.1|	-	0.00017	21.2	0.0	0.00025	20.7	0.0	1.3	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
DUF1776	PF08643.5	gi|449068089|ref|YP_007435171.1|	-	0.001	18.2	0.0	0.0013	17.8	0.0	1.3	1	0	0	1	1	1	1	Fungal	family	of	unknown	function	(DUF1776)
Epimerase	PF01370.16	gi|449068089|ref|YP_007435171.1|	-	0.0027	17.1	0.5	0.012	15.0	0.4	1.9	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
THF_DHG_CYH_C	PF02882.14	gi|449068089|ref|YP_007435171.1|	-	0.0036	16.3	0.0	0.012	14.6	0.0	1.8	2	0	0	2	2	2	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
RrnaAD	PF00398.15	gi|449068089|ref|YP_007435171.1|	-	0.0068	15.4	0.0	0.01	14.8	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Eno-Rase_NADH_b	PF12242.3	gi|449068089|ref|YP_007435171.1|	-	0.013	15.2	0.1	0.026	14.2	0.0	1.5	1	0	0	1	1	1	0	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
NAD_binding_10	PF13460.1	gi|449068089|ref|YP_007435171.1|	-	0.047	13.6	0.0	0.084	12.8	0.0	1.4	1	1	0	1	1	1	0	NADH(P)-binding
Methyltransf_18	PF12847.2	gi|449068089|ref|YP_007435171.1|	-	0.079	13.5	0.0	0.13	12.8	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|449068089|ref|YP_007435171.1|	-	0.11	12.8	0.0	0.18	12.1	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
Peptidase_M20	PF01546.23	gi|449068090|ref|YP_007435172.1|	-	6.4e-33	113.8	0.0	9.1e-33	113.3	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|449068090|ref|YP_007435172.1|	-	4.8e-21	74.6	0.0	1.8e-20	72.7	0.0	1.9	2	0	0	2	2	2	1	Peptidase	dimerisation	domain
Peptidase_M20	PF01546.23	gi|449068091|ref|YP_007435173.1|	-	6.4e-30	104.0	0.0	7.8e-30	103.7	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|449068091|ref|YP_007435173.1|	-	3.5e-06	26.7	0.0	7e-06	25.7	0.0	1.5	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Peptidase_M28	PF04389.12	gi|449068091|ref|YP_007435173.1|	-	0.0009	19.0	0.0	0.0017	18.1	0.0	1.4	1	0	0	1	1	1	1	Peptidase	family	M28
Peptidase_M42	PF05343.9	gi|449068091|ref|YP_007435173.1|	-	0.003	16.3	0.1	0.74	8.5	0.1	2.5	2	0	0	2	2	2	2	M42	glutamyl	aminopeptidase
MFS_1	PF07690.11	gi|449068092|ref|YP_007435174.1|	-	6.3e-28	97.5	44.3	6.3e-28	97.5	30.7	1.3	2	0	0	2	2	2	1	Major	Facilitator	Superfamily
Arginase	PF00491.16	gi|449068093|ref|YP_007435175.1|	-	6e-77	258.6	0.0	7e-77	258.4	0.0	1.0	1	0	0	1	1	1	1	Arginase	family
UPF0489	PF12640.2	gi|449068093|ref|YP_007435175.1|	-	0.23	11.6	0.9	1.1	9.4	0.2	2.0	1	1	1	2	2	2	0	UPF0489	domain
Apolipoprotein	PF01442.13	gi|449068094|ref|YP_007435176.1|	-	0.00019	20.9	2.1	0.00036	20.1	1.5	1.4	1	0	0	1	1	1	1	Apolipoprotein	A1/A4/E	domain
OmpH	PF03938.9	gi|449068094|ref|YP_007435176.1|	-	0.0072	16.2	5.2	0.013	15.4	3.6	1.5	1	0	0	1	1	1	1	Outer	membrane	protein	(OmpH-like)
HR1	PF02185.11	gi|449068094|ref|YP_007435176.1|	-	0.015	15.0	7.7	0.28	10.9	1.1	2.6	1	1	1	2	2	2	0	Hr1	repeat
Baculo_PEP_C	PF04513.7	gi|449068094|ref|YP_007435176.1|	-	0.015	15.1	1.4	0.043	13.6	0.8	1.8	1	1	0	1	1	1	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
RmuC	PF02646.11	gi|449068094|ref|YP_007435176.1|	-	0.025	13.4	6.9	0.066	12.0	1.2	2.2	1	1	0	2	2	2	0	RmuC	family
Myosin_tail_1	PF01576.14	gi|449068094|ref|YP_007435176.1|	-	0.063	11.0	19.5	0.016	12.9	1.8	2.3	2	1	1	3	3	3	0	Myosin	tail
TPR_MLP1_2	PF07926.7	gi|449068094|ref|YP_007435176.1|	-	0.072	12.8	6.9	0.17	11.6	4.4	1.9	1	1	0	1	1	1	0	TPR/MLP1/MLP2-like	protein
Halo_GVPC	PF05465.8	gi|449068094|ref|YP_007435176.1|	-	0.075	12.9	2.6	37	4.4	0.0	3.9	1	1	3	4	4	4	0	Halobacterial	gas	vesicle	protein	C	(GVPC)	repeat
ApoLp-III	PF07464.6	gi|449068094|ref|YP_007435176.1|	-	0.076	13.0	4.2	0.13	12.2	2.9	1.5	1	0	0	1	1	1	0	Apolipophorin-III	precursor	(apoLp-III)
Syntaxin-18_N	PF10496.4	gi|449068094|ref|YP_007435176.1|	-	0.091	12.6	1.7	5.3	6.9	0.1	3.2	1	1	2	3	3	3	0	SNARE-complex	protein	Syntaxin-18	N-terminus
PilJ	PF13675.1	gi|449068094|ref|YP_007435176.1|	-	0.095	13.0	0.5	0.85	9.9	0.3	2.3	1	1	0	1	1	1	0	Type	IV	pili	methyl-accepting	chemotaxis	transducer	N-term
DUF1640	PF07798.6	gi|449068094|ref|YP_007435176.1|	-	0.099	12.6	15.4	0.017	15.1	8.2	1.6	2	0	0	2	2	1	0	Protein	of	unknown	function	(DUF1640)
LMBR1	PF04791.11	gi|449068094|ref|YP_007435176.1|	-	0.15	10.5	1.4	0.17	10.4	1.0	1.3	1	0	0	1	1	1	0	LMBR1-like	membrane	protein
DUF883	PF05957.8	gi|449068094|ref|YP_007435176.1|	-	0.18	12.2	0.4	1	9.8	0.3	2.2	1	1	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF883)
DUF3166	PF11365.3	gi|449068094|ref|YP_007435176.1|	-	0.28	11.6	3.9	0.55	10.7	0.2	2.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3166)
Tup_N	PF08581.5	gi|449068094|ref|YP_007435176.1|	-	0.29	11.3	16.7	0.13	12.4	7.0	3.1	2	1	1	3	3	2	0	Tup	N-terminal
Rootletin	PF15035.1	gi|449068094|ref|YP_007435176.1|	-	0.41	10.6	10.7	5.2	7.0	7.4	2.4	1	1	0	1	1	1	0	Ciliary	rootlet	component,	centrosome	cohesion
Phage_GPO	PF05929.6	gi|449068094|ref|YP_007435176.1|	-	0.46	9.6	6.1	0.19	10.9	2.5	1.7	2	0	0	2	2	2	0	Phage	capsid	scaffolding	protein	(GPO)	serine	peptidase
MutS_IV	PF05190.13	gi|449068094|ref|YP_007435176.1|	-	0.54	10.4	13.4	2	8.6	0.6	3.9	1	1	2	3	3	3	0	MutS	family	domain	IV
PCRF	PF03462.13	gi|449068094|ref|YP_007435176.1|	-	0.59	9.8	5.7	2.1	8.0	1.0	2.9	1	1	3	4	4	4	0	PCRF	domain
IncA	PF04156.9	gi|449068094|ref|YP_007435176.1|	-	0.67	9.5	11.0	0.39	10.3	5.9	2.0	2	1	0	2	2	2	0	IncA	protein
YtxH	PF12732.2	gi|449068094|ref|YP_007435176.1|	-	0.71	10.2	4.0	7	7.0	0.1	2.7	2	0	0	2	2	2	0	YtxH-like	protein
DUF919	PF06034.6	gi|449068094|ref|YP_007435176.1|	-	1	9.0	13.6	3	7.5	1.4	3.8	1	1	2	3	3	3	0	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF919)
Fzo_mitofusin	PF04799.8	gi|449068094|ref|YP_007435176.1|	-	1.2	8.4	8.4	2.3	7.5	2.2	2.5	1	1	1	2	2	2	0	fzo-like	conserved	region
DUF1664	PF07889.7	gi|449068094|ref|YP_007435176.1|	-	4	7.2	10.3	4.1	7.2	3.8	2.9	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF1664)
PhoU	PF01895.14	gi|449068094|ref|YP_007435176.1|	-	6.8	7.2	13.1	8.5e+02	0.4	8.8	3.1	1	1	0	1	1	1	0	PhoU	domain
TMF_DNA_bd	PF12329.3	gi|449068094|ref|YP_007435176.1|	-	9.8	6.0	13.2	3.4	7.5	0.8	3.8	2	1	1	3	3	3	0	TATA	element	modulatory	factor	1	DNA	binding
HTH_24	PF13412.1	gi|449068095|ref|YP_007435177.1|	-	7.2e-15	54.1	2.6	1.1e-14	53.5	1.8	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|449068095|ref|YP_007435177.1|	-	5e-13	48.3	0.2	7.4e-13	47.8	0.2	1.3	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
AsnC_trans_reg	PF01037.16	gi|449068095|ref|YP_007435177.1|	-	8.6e-12	44.5	0.0	1.5e-11	43.7	0.0	1.4	1	0	0	1	1	1	1	AsnC	family
HTH_20	PF12840.2	gi|449068095|ref|YP_007435177.1|	-	4.9e-06	26.2	0.0	8.2e-06	25.5	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR	PF01047.17	gi|449068095|ref|YP_007435177.1|	-	3.4e-05	23.4	0.1	7e-05	22.4	0.1	1.5	1	0	0	1	1	1	1	MarR	family
HTH_5	PF01022.15	gi|449068095|ref|YP_007435177.1|	-	0.00013	21.5	0.1	0.00024	20.6	0.1	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
TrmB	PF01978.14	gi|449068095|ref|YP_007435177.1|	-	0.00019	21.0	0.2	0.00049	19.7	0.0	1.7	2	0	0	2	2	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|449068095|ref|YP_007435177.1|	-	0.00019	21.0	0.0	0.00036	20.1	0.0	1.4	1	0	0	1	1	1	1	MarR	family
DUF1759	PF03564.10	gi|449068095|ref|YP_007435177.1|	-	0.001	18.9	1.4	0.0049	16.6	0.1	2.0	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1759)
HTH_WhiA	PF02650.9	gi|449068095|ref|YP_007435177.1|	-	0.0013	19.0	1.1	0.0019	18.5	0.2	1.6	2	0	0	2	2	1	1	WhiA	C-terminal	HTH	domain
DUF2250	PF10007.4	gi|449068095|ref|YP_007435177.1|	-	0.0022	17.8	2.0	0.018	14.9	0.3	2.4	2	1	1	3	3	3	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
TFIIE_alpha	PF02002.12	gi|449068095|ref|YP_007435177.1|	-	0.0055	16.1	0.2	0.011	15.2	0.2	1.5	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HTH_11	PF08279.7	gi|449068095|ref|YP_007435177.1|	-	0.0074	15.9	2.0	0.0082	15.7	0.2	1.9	2	0	0	2	2	2	1	HTH	domain
DDRGK	PF09756.4	gi|449068095|ref|YP_007435177.1|	-	0.0082	15.5	0.3	0.013	14.8	0.2	1.3	1	0	0	1	1	1	1	DDRGK	domain
HTH_27	PF13463.1	gi|449068095|ref|YP_007435177.1|	-	0.01	16.1	0.0	0.02	15.2	0.0	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
DUF2004	PF09406.5	gi|449068095|ref|YP_007435177.1|	-	0.014	15.4	0.9	0.042	13.9	0.1	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2004)
HTH_IclR	PF09339.5	gi|449068095|ref|YP_007435177.1|	-	0.02	14.4	0.0	0.031	13.8	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
Sulfolobus_pRN	PF05584.6	gi|449068095|ref|YP_007435177.1|	-	0.028	14.3	0.5	0.059	13.3	0.1	1.7	2	0	0	2	2	2	0	Sulfolobus	plasmid	regulatory	protein
Fe_dep_repress	PF01325.14	gi|449068095|ref|YP_007435177.1|	-	0.079	12.9	0.1	0.18	11.7	0.1	1.6	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_30	PF13556.1	gi|449068095|ref|YP_007435177.1|	-	0.086	12.4	0.0	0.14	11.7	0.0	1.3	1	0	0	1	1	1	0	PucR	C-terminal	helix-turn-helix	domain
HTH_Crp_2	PF13545.1	gi|449068095|ref|YP_007435177.1|	-	0.094	12.5	0.0	0.17	11.7	0.0	1.4	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
HTH_34	PF13601.1	gi|449068095|ref|YP_007435177.1|	-	0.1	12.6	0.3	0.28	11.2	0.1	1.8	1	1	1	2	2	2	0	Winged	helix	DNA-binding	domain
RuvB_C	PF05491.8	gi|449068095|ref|YP_007435177.1|	-	0.11	12.0	0.3	0.39	10.3	0.2	1.9	1	1	0	1	1	1	0	Holliday	junction	DNA	helicase	ruvB	C-terminus
Mga	PF05043.8	gi|449068095|ref|YP_007435177.1|	-	0.13	12.5	2.2	0.13	12.6	0.4	1.8	2	0	0	2	2	2	0	Mga	helix-turn-helix	domain
Aminotran_3	PF00202.16	gi|449068096|ref|YP_007435178.1|	-	8e-83	278.0	0.0	9.4e-83	277.8	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
EamA	PF00892.15	gi|449068097|ref|YP_007435179.1|	-	7.2e-32	110.0	27.5	6.2e-17	61.8	7.2	2.2	2	0	0	2	2	2	2	EamA-like	transporter	family
EmrE	PF13536.1	gi|449068097|ref|YP_007435179.1|	-	1.4e-06	28.5	23.5	0.0019	18.3	2.5	2.9	1	1	2	3	3	3	3	Multidrug	resistance	efflux	transporter
TPT	PF03151.11	gi|449068097|ref|YP_007435179.1|	-	0.035	13.7	19.3	0.21	11.2	0.9	2.8	2	2	0	2	2	2	0	Triose-phosphate	Transporter	family
Vpu	PF00558.14	gi|449068097|ref|YP_007435179.1|	-	0.37	10.3	0.0	0.37	10.3	0.0	2.1	2	1	0	2	2	2	0	Vpu	protein
Hs1pro-1_C	PF07014.7	gi|449068098|ref|YP_007435180.1|	-	0.085	12.1	0.5	0.1	11.9	0.3	1.1	1	0	0	1	1	1	0	Hs1pro-1	protein	C-terminus
DUF356	PF04009.7	gi|449068098|ref|YP_007435180.1|	-	0.085	12.9	0.1	0.097	12.7	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF356)
DUF3067	PF11267.3	gi|449068098|ref|YP_007435180.1|	-	0.13	12.3	0.2	0.18	11.9	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3067)
PTE	PF02126.13	gi|449068099|ref|YP_007435181.1|	-	2.5e-85	286.1	0.0	2.9e-85	285.9	0.0	1.0	1	0	0	1	1	1	1	Phosphotriesterase	family
Gln-synt_C	PF00120.19	gi|449068100|ref|YP_007435182.1|	-	4.1e-77	258.8	0.0	6.1e-77	258.2	0.0	1.3	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.14	gi|449068100|ref|YP_007435182.1|	-	0.2	11.2	0.6	1.2	8.7	0.4	2.2	1	1	0	1	1	1	0	Glutamine	synthetase,	beta-Grasp	domain
Amidohydro_2	PF04909.9	gi|449068101|ref|YP_007435183.1|	-	4.2e-32	111.8	0.0	6.4e-32	111.1	0.0	1.3	1	1	0	1	1	1	1	Amidohydrolase
TatD_DNase	PF01026.16	gi|449068101|ref|YP_007435183.1|	-	4.5e-05	22.7	0.0	0.0007	18.8	0.0	2.1	2	0	0	2	2	2	1	TatD	related	DNase
UxaC	PF02614.9	gi|449068101|ref|YP_007435183.1|	-	0.079	11.5	0.0	4.4	5.8	0.0	2.2	2	0	0	2	2	2	0	Glucuronate	isomerase
HpaB_N	PF11794.3	gi|449068102|ref|YP_007435184.1|	-	1.5e-88	296.6	0.1	2e-88	296.1	0.0	1.2	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
HpaB	PF03241.8	gi|449068102|ref|YP_007435184.1|	-	1.1e-63	213.7	0.1	1.5e-63	213.3	0.0	1.2	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	C	terminal
Pyr_redox_2	PF07992.9	gi|449068103|ref|YP_007435185.1|	-	2.4e-21	76.5	0.0	3.7e-21	75.9	0.0	1.5	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|449068103|ref|YP_007435185.1|	-	8.1e-20	71.7	0.3	1.6e-13	51.2	0.0	3.0	2	1	1	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|449068103|ref|YP_007435185.1|	-	2e-12	47.3	0.1	5.3e-09	36.3	0.0	2.7	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
K_oxygenase	PF13434.1	gi|449068103|ref|YP_007435185.1|	-	4.4e-11	42.2	0.1	3.8e-08	32.6	0.0	3.0	2	1	1	3	3	3	2	L-lysine	6-monooxygenase	(NADPH-requiring)
HI0933_like	PF03486.9	gi|449068103|ref|YP_007435185.1|	-	4.2e-08	32.0	0.0	0.0011	17.5	0.0	3.5	4	0	0	4	4	4	2	HI0933-like	protein
NAD_binding_8	PF13450.1	gi|449068103|ref|YP_007435185.1|	-	4.9e-06	26.4	0.2	9.4e-05	22.3	0.0	2.4	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.12	gi|449068103|ref|YP_007435185.1|	-	4.7e-05	22.5	1.0	0.0072	15.4	0.0	3.6	3	1	1	4	4	4	1	Thi4	family
DAO	PF01266.19	gi|449068103|ref|YP_007435185.1|	-	0.00011	21.1	0.5	0.021	13.7	0.0	3.0	2	1	1	3	3	3	1	FAD	dependent	oxidoreductase
NAD_binding_7	PF13241.1	gi|449068103|ref|YP_007435185.1|	-	0.00044	20.4	0.3	0.0068	16.6	0.0	2.4	2	0	0	2	2	2	1	Putative	NAD(P)-binding
FMO-like	PF00743.14	gi|449068103|ref|YP_007435185.1|	-	0.002	16.4	0.2	0.0094	14.1	0.0	1.9	1	1	1	2	2	2	1	Flavin-binding	monooxygenase-like
FAD_oxidored	PF12831.2	gi|449068103|ref|YP_007435185.1|	-	0.0021	17.1	0.1	0.006	15.7	0.0	1.8	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
NAD_binding_9	PF13454.1	gi|449068103|ref|YP_007435185.1|	-	0.0041	16.9	1.4	4.1	7.1	0.0	3.5	3	1	1	4	4	4	1	FAD-NAD(P)-binding
FAD_binding_2	PF00890.19	gi|449068103|ref|YP_007435185.1|	-	0.028	13.2	1.1	4.5	6.0	0.0	3.1	3	1	1	4	4	4	0	FAD	binding	domain
Spermine_synth	PF01564.12	gi|449068103|ref|YP_007435185.1|	-	0.057	12.3	0.3	0.2	10.5	0.0	1.8	2	0	0	2	2	2	0	Spermine/spermidine	synthase
Lycopene_cycl	PF05834.7	gi|449068103|ref|YP_007435185.1|	-	0.096	11.5	0.0	3.7	6.3	0.0	2.8	2	1	1	3	3	3	0	Lycopene	cyclase	protein
ADH_N	PF08240.7	gi|449068104|ref|YP_007435186.1|	-	4.3e-30	103.6	1.1	4.3e-30	103.6	0.8	1.9	3	0	0	3	3	3	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|449068104|ref|YP_007435186.1|	-	9.9e-28	96.2	0.1	9.9e-28	96.2	0.1	1.7	2	0	0	2	2	2	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|449068104|ref|YP_007435186.1|	-	0.00052	20.9	0.0	0.0045	17.8	0.0	2.2	2	0	0	2	2	2	1	Zinc-binding	dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|449068104|ref|YP_007435186.1|	-	0.036	13.2	0.2	0.068	12.3	0.1	1.4	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
ThiF	PF00899.16	gi|449068104|ref|YP_007435186.1|	-	0.085	12.6	5.0	0.21	11.4	3.5	1.6	1	0	0	1	1	1	0	ThiF	family
Shikimate_DH	PF01488.15	gi|449068104|ref|YP_007435186.1|	-	0.22	11.6	1.0	1.9	8.6	0.2	2.3	2	0	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
Biotin_lipoyl_2	PF13533.1	gi|449068104|ref|YP_007435186.1|	-	0.3	10.7	1.6	3	7.5	0.5	2.4	2	0	0	2	2	2	0	Biotin-lipoyl	like
AMP-binding_C_2	PF14535.1	gi|449068105|ref|YP_007435187.1|	-	2.2e-15	56.4	0.0	3.9e-15	55.6	0.0	1.4	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
AMP-binding	PF00501.23	gi|449068105|ref|YP_007435187.1|	-	5.9e-07	28.2	0.0	1e-06	27.4	0.0	1.3	1	0	0	1	1	1	1	AMP-binding	enzyme
Glyco_transf_11	PF01531.11	gi|449068105|ref|YP_007435187.1|	-	0.069	12.1	0.0	0.12	11.3	0.0	1.2	1	0	0	1	1	1	0	Glycosyl	transferase	family	11
Semialdhyde_dh	PF01118.19	gi|449068106|ref|YP_007435188.1|	-	1.8e-30	105.7	0.0	3.7e-30	104.7	0.0	1.5	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Semialdhyde_dhC	PF02774.13	gi|449068106|ref|YP_007435188.1|	-	8.4e-23	81.1	0.0	1.4e-22	80.4	0.0	1.3	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
Gp_dh_C	PF02800.15	gi|449068106|ref|YP_007435188.1|	-	0.026	13.9	0.0	0.078	12.4	0.0	1.8	2	0	0	2	2	2	0	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
AMP-binding	PF00501.23	gi|449068107|ref|YP_007435189.1|	-	5e-102	341.3	0.0	6e-102	341.1	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|449068107|ref|YP_007435189.1|	-	4.6e-17	62.7	0.3	3.5e-16	59.9	0.1	2.3	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
FAA_hydrolase	PF01557.13	gi|449068108|ref|YP_007435190.1|	-	2.8e-51	174.0	0.0	3.5e-51	173.7	0.0	1.1	1	0	0	1	1	1	1	Fumarylacetoacetate	(FAA)	hydrolase	family
Lactamase_B	PF00753.22	gi|449068109|ref|YP_007435191.1|	-	1.3e-24	86.9	0.6	1.8e-24	86.4	0.4	1.2	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|449068109|ref|YP_007435191.1|	-	0.0051	16.3	0.3	0.0072	15.8	0.2	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|449068109|ref|YP_007435191.1|	-	0.0087	15.7	0.5	0.014	15.0	0.3	1.4	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
TauE	PF01925.14	gi|449068110|ref|YP_007435192.1|	-	3.8e-18	65.8	14.4	3.8e-18	65.8	10.0	1.4	1	1	0	1	1	1	1	Sulfite	exporter	TauE/SafE
FmdA_AmdA	PF03069.10	gi|449068111|ref|YP_007435193.1|	-	2e-66	224.1	0.1	3.4e-37	128.0	0.1	2.1	1	1	1	2	2	2	2	Acetamidase/Formamidase	family
Acetyltransf_1	PF00583.19	gi|449068112|ref|YP_007435194.1|	-	8.2e-17	61.0	0.0	1.1e-16	60.6	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|449068112|ref|YP_007435194.1|	-	6.2e-16	58.3	0.0	8.8e-16	57.8	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|449068112|ref|YP_007435194.1|	-	3.8e-14	52.8	0.0	4.6e-14	52.6	0.0	1.0	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|449068112|ref|YP_007435194.1|	-	1.3e-13	51.1	0.0	1.5e-13	50.8	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|449068112|ref|YP_007435194.1|	-	3e-10	40.0	0.0	4.7e-10	39.4	0.0	1.3	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|449068112|ref|YP_007435194.1|	-	2e-07	30.6	0.0	4.1e-07	29.6	0.0	1.4	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_3	PF13302.1	gi|449068112|ref|YP_007435194.1|	-	4.4e-06	26.9	0.0	5.1e-06	26.6	0.0	1.0	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.1	gi|449068112|ref|YP_007435194.1|	-	1.9e-05	24.5	0.0	2.2e-05	24.3	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
DUF3749	PF12568.3	gi|449068112|ref|YP_007435194.1|	-	0.0009	18.8	0.0	0.001	18.6	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Mec-17	PF05301.6	gi|449068112|ref|YP_007435194.1|	-	0.0017	18.2	0.0	0.0065	16.4	0.0	1.9	2	0	0	2	2	2	1	Touch	receptor	neuron	protein	Mec-17
Acetyltransf_CG	PF14542.1	gi|449068112|ref|YP_007435194.1|	-	0.031	14.1	0.0	0.05	13.4	0.0	1.3	1	0	0	1	1	1	0	GCN5-related	N-acetyl-transferase
Malic_M	PF03949.10	gi|449068113|ref|YP_007435195.1|	-	3.2e-65	220.2	0.5	4e-65	219.9	0.3	1.1	1	0	0	1	1	1	1	Malic	enzyme,	NAD	binding	domain
malic	PF00390.14	gi|449068113|ref|YP_007435195.1|	-	1.9e-27	96.0	0.2	1e-24	87.1	0.2	2.5	1	1	0	1	1	1	1	Malic	enzyme,	N-terminal	domain
AdoHcyase_NAD	PF00670.16	gi|449068113|ref|YP_007435195.1|	-	0.0022	17.8	0.0	0.0045	16.8	0.0	1.5	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
Shikimate_DH	PF01488.15	gi|449068113|ref|YP_007435195.1|	-	0.0074	16.3	0.1	0.058	13.4	0.0	2.2	2	0	0	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
DUF4031	PF13223.1	gi|449068113|ref|YP_007435195.1|	-	0.037	14.1	0.0	0.076	13.1	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4031)
Oxidored_nitro	PF00148.14	gi|449068113|ref|YP_007435195.1|	-	0.056	12.0	0.0	0.09	11.3	0.0	1.3	1	0	0	1	1	1	0	Nitrogenase	component	1	type	Oxidoreductase
Peptidase_S9	PF00326.16	gi|449068114|ref|YP_007435196.1|	-	1.2e-37	129.2	0.0	2.3e-37	128.2	0.0	1.4	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
Abhydrolase_5	PF12695.2	gi|449068114|ref|YP_007435196.1|	-	1.2e-13	51.0	0.0	2.3e-13	50.1	0.0	1.5	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_6	PF12697.2	gi|449068114|ref|YP_007435196.1|	-	2.4e-12	47.2	0.0	1e-10	41.8	0.0	2.3	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Peptidase_S15	PF02129.13	gi|449068114|ref|YP_007435196.1|	-	1.1e-08	34.9	0.4	0.00012	21.6	0.5	2.4	1	1	1	2	2	2	2	X-Pro	dipeptidyl-peptidase	(S15	family)
DLH	PF01738.13	gi|449068114|ref|YP_007435196.1|	-	3.1e-07	29.9	0.0	0.00068	18.9	0.0	2.2	2	0	0	2	2	2	2	Dienelactone	hydrolase	family
Abhydrolase_1	PF00561.15	gi|449068114|ref|YP_007435196.1|	-	1.2e-05	25.0	0.5	0.00075	19.1	0.1	2.4	1	1	1	2	2	2	1	alpha/beta	hydrolase	fold
LIP	PF03583.9	gi|449068114|ref|YP_007435196.1|	-	0.00039	19.7	1.6	0.013	14.7	0.2	2.3	1	1	0	2	2	2	1	Secretory	lipase
Abhydrolase_3	PF07859.8	gi|449068114|ref|YP_007435196.1|	-	0.012	15.1	0.3	0.23	11.0	0.0	2.6	2	1	0	2	2	2	0	alpha/beta	hydrolase	fold
BAAT_C	PF08840.6	gi|449068114|ref|YP_007435196.1|	-	0.023	14.3	0.1	0.96	9.1	0.0	2.3	2	0	0	2	2	2	0	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
EF-hand_3	PF09069.6	gi|449068115|ref|YP_007435197.1|	-	0.15	12.1	0.0	0.16	12.0	0.0	1.2	1	0	0	1	1	1	0	EF-hand
DNA_pol_B	PF00136.16	gi|449068116|ref|YP_007435198.1|	-	8.4e-21	74.2	1.3	8.7e-20	70.9	0.9	2.2	1	1	0	1	1	1	1	DNA	polymerase	family	B
DUF2482	PF10655.4	gi|449068117|ref|YP_007435199.1|	-	0.13	12.3	0.0	0.2	11.7	0.0	1.3	1	0	0	1	1	1	0	Hypothetical	protein	of	unknown	function	(DUF2482)
FlaC_arch	PF05377.6	gi|449068118|ref|YP_007435200.1|	-	0.00086	19.1	5.3	2.2	8.2	0.0	3.0	1	1	2	3	3	3	1	Flagella	accessory	protein	C	(FlaC)
APG6	PF04111.7	gi|449068118|ref|YP_007435200.1|	-	0.00096	18.2	8.0	0.0015	17.6	5.5	1.3	1	0	0	1	1	1	1	Autophagy	protein	Apg6
FlgN	PF05130.7	gi|449068118|ref|YP_007435200.1|	-	0.0025	18.0	2.9	0.0048	17.1	2.0	1.5	1	0	0	1	1	1	1	FlgN	protein
IncA	PF04156.9	gi|449068118|ref|YP_007435200.1|	-	0.0028	17.2	6.0	0.005	16.4	4.2	1.5	1	0	0	1	1	1	1	IncA	protein
AAA_27	PF13514.1	gi|449068118|ref|YP_007435200.1|	-	0.003	15.3	2.5	0.0038	14.9	1.7	1.1	1	0	0	1	1	1	1	AAA	domain
Seryl_tRNA_N	PF02403.17	gi|449068118|ref|YP_007435200.1|	-	0.011	15.7	11.5	0.011	15.7	8.0	1.6	2	0	0	2	2	1	0	Seryl-tRNA	synthetase	N-terminal	domain
RmuC	PF02646.11	gi|449068118|ref|YP_007435200.1|	-	0.012	14.4	5.4	0.024	13.4	3.4	1.6	1	1	1	2	2	2	0	RmuC	family
DUF1664	PF07889.7	gi|449068118|ref|YP_007435200.1|	-	0.013	15.3	7.6	0.26	11.0	3.3	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1664)
DUF1626	PF07788.6	gi|449068118|ref|YP_007435200.1|	-	0.013	15.2	1.9	0.03	14.1	0.2	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1626)
Atg14	PF10186.4	gi|449068118|ref|YP_007435200.1|	-	0.014	14.3	5.7	0.022	13.7	4.0	1.3	1	0	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
Arfaptin	PF06456.8	gi|449068118|ref|YP_007435200.1|	-	0.016	14.6	0.8	0.02	14.2	0.5	1.3	1	0	0	1	1	1	0	Arfaptin-like	domain
Lyase_8_N	PF08124.6	gi|449068118|ref|YP_007435200.1|	-	0.016	14.1	2.1	0.023	13.5	1.4	1.3	1	0	0	1	1	1	0	Polysaccharide	lyase	family	8,	N	terminal	alpha-helical	domain
ERM	PF00769.14	gi|449068118|ref|YP_007435200.1|	-	0.022	14.3	6.2	0.033	13.7	4.3	1.2	1	0	0	1	1	1	0	Ezrin/radixin/moesin	family
ADIP	PF11559.3	gi|449068118|ref|YP_007435200.1|	-	0.036	13.9	7.1	0.063	13.1	4.9	1.3	1	0	0	1	1	1	0	Afadin-	and	alpha	-actinin-Binding
Laminin_I	PF06008.9	gi|449068118|ref|YP_007435200.1|	-	0.04	13.2	7.4	0.074	12.3	5.0	1.5	1	1	0	1	1	1	0	Laminin	Domain	I
SPX	PF03105.14	gi|449068118|ref|YP_007435200.1|	-	0.051	13.3	4.7	0.073	12.8	3.2	1.2	1	0	0	1	1	1	0	SPX	domain
AAA_11	PF13086.1	gi|449068118|ref|YP_007435200.1|	-	0.052	13.1	3.7	0.086	12.3	2.6	1.3	1	0	0	1	1	1	0	AAA	domain
DUF1465	PF07323.7	gi|449068118|ref|YP_007435200.1|	-	0.053	13.0	0.4	0.28	10.7	0.2	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1465)
AATF-Che1	PF13339.1	gi|449068118|ref|YP_007435200.1|	-	0.053	13.6	5.8	0.1	12.7	4.0	1.4	1	0	0	1	1	1	0	Apoptosis	antagonizing	transcription	factor
H-kinase_dim	PF02895.9	gi|449068118|ref|YP_007435200.1|	-	0.11	12.8	0.8	0.3	11.4	0.6	1.7	1	0	0	1	1	1	0	Signal	transducing	histidine	kinase,	homodimeric	domain
Nup54	PF13874.1	gi|449068118|ref|YP_007435200.1|	-	0.12	12.0	6.6	0.33	10.6	3.5	2.1	1	1	1	2	2	2	0	Nucleoporin	complex	subunit	54
DUF972	PF06156.8	gi|449068118|ref|YP_007435200.1|	-	0.12	12.7	7.7	0.72	10.2	5.1	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF972)
Fib_alpha	PF08702.5	gi|449068118|ref|YP_007435200.1|	-	0.13	12.4	6.4	0.28	11.2	4.4	1.6	1	0	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
CtIP_N	PF10482.4	gi|449068118|ref|YP_007435200.1|	-	0.13	12.0	6.6	0.49	10.1	1.8	2.4	1	1	1	2	2	2	0	Tumour-suppressor	protein	CtIP	N-terminal	domain
MCPsignal	PF00015.16	gi|449068118|ref|YP_007435200.1|	-	0.13	11.8	7.6	0.18	11.3	2.5	2.1	1	1	1	2	2	2	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
eIF3_N	PF09440.5	gi|449068118|ref|YP_007435200.1|	-	0.18	11.9	3.1	0.25	11.4	1.5	1.7	2	0	0	2	2	1	0	eIF3	subunit	6	N	terminal	domain
Flagellar_rod	PF05149.7	gi|449068118|ref|YP_007435200.1|	-	0.27	10.4	10.3	0.1	11.8	3.4	2.2	1	1	1	2	2	2	0	Paraflagellar	rod	protein
Cluap1	PF10234.4	gi|449068118|ref|YP_007435200.1|	-	0.27	10.3	10.0	0.88	8.7	5.5	2.2	2	1	1	3	3	3	0	Clusterin-associated	protein-1
CotH	PF08757.6	gi|449068118|ref|YP_007435200.1|	-	0.27	10.4	4.1	0.22	10.7	0.7	2.0	1	1	1	2	2	2	0	CotH	protein
DUF948	PF06103.6	gi|449068118|ref|YP_007435200.1|	-	0.33	10.8	2.5	2.6	7.9	1.4	2.5	2	1	0	2	2	1	0	Bacterial	protein	of	unknown	function	(DUF948)
Sec20	PF03908.8	gi|449068118|ref|YP_007435200.1|	-	0.35	10.6	4.0	0.94	9.2	1.8	2.3	1	1	0	2	2	2	0	Sec20
HemX	PF04375.9	gi|449068118|ref|YP_007435200.1|	-	0.35	9.3	4.9	0.49	8.9	3.4	1.1	1	0	0	1	1	1	0	HemX
FadR_C	PF07840.7	gi|449068118|ref|YP_007435200.1|	-	0.37	10.4	3.8	1.2	8.6	0.1	2.5	1	1	1	2	2	2	0	FadR	C-terminal	domain
DUF4201	PF13870.1	gi|449068118|ref|YP_007435200.1|	-	0.37	10.2	13.3	0.018	14.4	5.4	1.5	2	0	0	2	2	1	0	Domain	of	unknown	function	(DUF4201)
BLOC1_2	PF10046.4	gi|449068118|ref|YP_007435200.1|	-	0.4	10.8	8.2	1.6	8.9	5.0	2.2	1	1	1	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
zf-C4H2	PF10146.4	gi|449068118|ref|YP_007435200.1|	-	0.46	10.4	8.8	0.72	9.8	6.1	1.4	1	0	0	1	1	1	0	Zinc	finger-containing	protein
DegS	PF05384.6	gi|449068118|ref|YP_007435200.1|	-	0.48	9.6	12.1	0.081	12.1	3.8	2.2	1	1	1	2	2	2	0	Sensor	protein	DegS
Kinesin-relat_1	PF12711.2	gi|449068118|ref|YP_007435200.1|	-	0.55	10.6	7.1	0.99	9.8	3.8	2.3	2	0	0	2	2	1	0	Kinesin	motor
DUF3347	PF11827.3	gi|449068118|ref|YP_007435200.1|	-	0.64	10.0	4.6	0.99	9.3	2.7	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3347)
DUF724	PF05266.9	gi|449068118|ref|YP_007435200.1|	-	1.4	8.5	10.3	9.2	5.8	7.2	2.1	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF724)
DUF4446	PF14584.1	gi|449068118|ref|YP_007435200.1|	-	1.5	8.6	6.0	3.3	7.5	2.5	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4446)
SpoOE-like	PF09388.5	gi|449068118|ref|YP_007435200.1|	-	2.2	7.8	7.8	2.9	7.4	0.6	3.1	2	0	0	2	2	2	0	Spo0E	like	sporulation	regulatory	protein
Prefoldin_2	PF01920.15	gi|449068118|ref|YP_007435200.1|	-	2.4	7.9	10.4	14	5.4	2.0	2.7	1	1	1	2	2	2	0	Prefoldin	subunit
Snapin_Pallidin	PF14712.1	gi|449068118|ref|YP_007435200.1|	-	3.4	8.0	8.6	1.5	9.1	3.2	2.4	2	1	0	2	2	2	0	Snapin/Pallidin
DUF2120	PF09893.4	gi|449068118|ref|YP_007435200.1|	-	5	7.0	8.4	3.2	7.6	1.7	2.5	1	1	2	3	3	3	0	Uncharacterized	protein	conserved	in	archaea	(DUF2120)
OmpH	PF03938.9	gi|449068118|ref|YP_007435200.1|	-	5.9	6.8	9.2	17	5.3	6.4	1.9	1	1	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
DUF4164	PF13747.1	gi|449068118|ref|YP_007435200.1|	-	6.2	7.0	9.5	4.3	7.5	4.4	2.3	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4164)
Cauli_AT	PF03233.8	gi|449068118|ref|YP_007435200.1|	-	6.2	6.5	14.6	1	9.0	2.4	2.5	2	1	1	3	3	3	0	Aphid	transmission	protein
DUF2079	PF09852.4	gi|449068119|ref|YP_007435201.1|	-	2.5e-22	79.2	35.0	3e-22	78.9	24.2	1.1	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2079)
DUF2079	PF09852.4	gi|449068120|ref|YP_007435202.1|	-	1.6e-92	310.6	38.8	2.2e-92	310.1	26.9	1.2	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2079)
zinc_ribbon_2	PF13240.1	gi|449068121|ref|YP_007435203.1|	-	2.2e-05	23.7	5.3	3.5e-05	23.1	3.7	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|449068121|ref|YP_007435203.1|	-	2.7e-05	23.2	4.9	4.2e-05	22.6	3.4	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|449068121|ref|YP_007435203.1|	-	9.8e-05	22.0	2.9	0.00015	21.4	2.0	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-RanBP	PF00641.13	gi|449068121|ref|YP_007435203.1|	-	0.0003	19.8	1.1	0.00067	18.7	0.7	1.5	1	0	0	1	1	1	1	Zn-finger	in	Ran	binding	protein	and	others
Gemini_mov	PF01708.11	gi|449068121|ref|YP_007435203.1|	-	0.0012	18.2	0.3	0.0024	17.3	0.2	1.5	1	0	0	1	1	1	1	Geminivirus	putative	movement	protein
DUF3357	PF11837.3	gi|449068121|ref|YP_007435203.1|	-	0.0088	15.8	0.1	0.014	15.2	0.1	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3357)
Ribosomal_L37e	PF01907.14	gi|449068121|ref|YP_007435203.1|	-	1.4	8.7	5.0	5.8	6.7	3.4	1.9	1	1	0	1	1	1	0	Ribosomal	protein	L37e
UPF0547	PF10571.4	gi|449068121|ref|YP_007435203.1|	-	2.1	8.1	5.3	15	5.3	3.7	2.3	1	1	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
RNA_POL_M_15KD	PF02150.11	gi|449068121|ref|YP_007435203.1|	-	2.4	7.9	5.5	33	4.2	3.8	2.2	1	1	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
RibD_C	PF01872.12	gi|449068122|ref|YP_007435204.1|	-	2.3e-49	167.7	0.0	2.5e-49	167.5	0.0	1.0	1	0	0	1	1	1	1	RibD	C-terminal	domain
GDPD	PF03009.12	gi|449068123|ref|YP_007435205.1|	-	2.9e-31	108.9	1.3	4.6e-31	108.2	0.9	1.3	1	0	0	1	1	1	1	Glycerophosphoryl	diester	phosphodiesterase	family
GDPD_2	PF13653.1	gi|449068123|ref|YP_007435205.1|	-	6.3e-05	23.0	0.1	0.0057	16.8	0.1	2.6	2	0	0	2	2	2	1	Glycerophosphoryl	diester	phosphodiesterase	family
DUF488	PF04343.8	gi|449068124|ref|YP_007435206.1|	-	7.1e-19	68.3	0.0	1.2e-18	67.6	0.0	1.3	1	1	0	1	1	1	1	Protein	of	unknown	function,	DUF488
HTH_10	PF04967.7	gi|449068125|ref|YP_007435207.1|	-	2.3e-21	75.0	0.2	5e-21	74.0	0.1	1.6	1	0	0	1	1	1	1	HTH	DNA	binding	domain
Sigma70_r4	PF04545.11	gi|449068125|ref|YP_007435207.1|	-	4.8e-06	25.7	0.9	1.1e-05	24.6	0.6	1.6	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_24	PF13412.1	gi|449068125|ref|YP_007435207.1|	-	0.00037	19.8	0.2	0.00037	19.8	0.1	2.3	2	1	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_26	PF13443.1	gi|449068125|ref|YP_007435207.1|	-	0.0056	16.8	0.0	0.02	15.0	0.0	1.9	1	0	0	1	1	1	1	Cro/C1-type	HTH	DNA-binding	domain
HTH_AsnC-type	PF13404.1	gi|449068125|ref|YP_007435207.1|	-	0.014	14.9	0.2	0.048	13.2	0.0	1.9	2	0	0	2	2	2	0	AsnC-type	helix-turn-helix	domain
MarR_2	PF12802.2	gi|449068125|ref|YP_007435207.1|	-	0.024	14.3	0.0	0.045	13.4	0.0	1.4	1	0	0	1	1	1	0	MarR	family
HTH_27	PF13463.1	gi|449068125|ref|YP_007435207.1|	-	0.051	13.8	1.9	0.22	11.8	0.0	2.8	3	1	0	3	3	3	0	Winged	helix	DNA-binding	domain
Fe_dep_repress	PF01325.14	gi|449068125|ref|YP_007435207.1|	-	0.052	13.5	0.0	0.41	10.6	0.0	2.4	2	0	0	2	2	2	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_37	PF13744.1	gi|449068125|ref|YP_007435207.1|	-	0.06	13.1	2.0	0.15	11.8	0.0	2.5	3	0	0	3	3	3	0	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|449068125|ref|YP_007435207.1|	-	0.071	12.7	0.7	0.43	10.2	0.0	2.4	3	0	0	3	3	3	0	Homeodomain-like	domain
HTH_Mga	PF08280.6	gi|449068125|ref|YP_007435207.1|	-	0.14	11.9	4.4	0.2	11.4	0.1	3.1	3	1	0	3	3	3	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
Sigma70_r4_2	PF08281.7	gi|449068125|ref|YP_007435207.1|	-	0.15	11.5	2.2	3	7.3	0.0	3.2	3	0	0	3	3	3	0	Sigma-70,	region	4
HTH_17	PF12728.2	gi|449068125|ref|YP_007435207.1|	-	0.16	12.2	1.2	0.85	9.9	0.2	2.4	2	1	1	3	3	3	0	Helix-turn-helix	domain
LexA_DNA_bind	PF01726.11	gi|449068125|ref|YP_007435207.1|	-	0.21	11.1	1.4	2	8.0	0.9	2.4	1	1	0	1	1	1	0	LexA	DNA	binding	domain
IF2_N	PF04760.10	gi|449068125|ref|YP_007435207.1|	-	0.34	10.5	5.3	13	5.5	0.1	3.3	3	0	0	3	3	3	0	Translation	initiation	factor	IF-2,	N-terminal	region
GerE	PF00196.14	gi|449068125|ref|YP_007435207.1|	-	1.3	8.4	5.6	12	5.3	0.0	3.3	4	0	0	4	4	4	0	Bacterial	regulatory	proteins,	luxR	family
RHH_1	PF01402.16	gi|449068125|ref|YP_007435207.1|	-	1.6	8.7	5.4	26	4.9	0.4	3.3	2	1	0	2	2	2	0	Ribbon-helix-helix	protein,	copG	family
Amidase	PF01425.16	gi|449068126|ref|YP_007435208.1|	-	1e-112	377.2	0.0	1.2e-112	377.0	0.0	1.0	1	0	0	1	1	1	1	Amidase
DUF973	PF06157.6	gi|449068127|ref|YP_007435209.1|	-	4.2e-05	22.6	12.3	9.8e-05	21.4	8.6	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
LTD	PF00932.14	gi|449068127|ref|YP_007435209.1|	-	0.0035	17.4	0.2	0.0041	17.1	0.2	1.2	1	0	0	1	1	1	1	Lamin	Tail	Domain
PCNA_C	PF02747.10	gi|449068127|ref|YP_007435209.1|	-	0.0047	16.8	0.3	0.0064	16.4	0.2	1.2	1	0	0	1	1	1	1	Proliferating	cell	nuclear	antigen,	C-terminal	domain
DUF1573	PF07610.6	gi|449068127|ref|YP_007435209.1|	-	0.085	12.4	0.1	0.19	11.3	0.0	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1573)
CARDB	PF07705.6	gi|449068127|ref|YP_007435209.1|	-	0.098	12.7	2.0	0.14	12.2	1.4	1.3	1	0	0	1	1	1	0	CARDB
IncA	PF04156.9	gi|449068127|ref|YP_007435209.1|	-	0.18	11.3	0.3	0.2	11.2	0.2	1.2	1	0	0	1	1	1	0	IncA	protein
DUF4330	PF14221.1	gi|449068127|ref|YP_007435209.1|	-	0.4	10.5	4.6	3	7.6	3.2	1.9	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4330)
Big_2	PF02368.13	gi|449068127|ref|YP_007435209.1|	-	0.68	9.8	5.9	3.5	7.5	0.2	2.3	2	0	0	2	2	2	0	Bacterial	Ig-like	domain	(group	2)
Thermopsin	PF05317.6	gi|449068128|ref|YP_007435210.1|	-	2.8e-81	272.3	19.8	2.8e-81	272.3	13.7	3.0	2	1	0	3	3	3	2	Thermopsin
DUF973	PF06157.6	gi|449068130|ref|YP_007435212.1|	-	7.7e-17	61.1	18.4	1.1e-16	60.6	12.7	1.3	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
DUF3704	PF12488.3	gi|449068130|ref|YP_007435212.1|	-	0.083	12.5	2.4	0.26	10.9	0.3	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3704)
Lactamase_B	PF00753.22	gi|449068134|ref|YP_007435216.1|	-	2.9e-16	59.6	0.0	3.9e-16	59.2	0.0	1.3	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|449068134|ref|YP_007435216.1|	-	1.7e-05	24.4	0.1	2.4e-05	23.9	0.1	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
DUF3024	PF11225.3	gi|449068134|ref|YP_007435216.1|	-	0.037	13.8	1.4	0.084	12.7	0.7	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3024)
DUF2420	PF10336.4	gi|449068135|ref|YP_007435217.1|	-	0.078	12.5	2.4	0.19	11.3	0.2	2.3	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2420)
AA_permease	PF00324.16	gi|449068136|ref|YP_007435218.1|	-	5.4e-31	107.4	55.8	7.9e-31	106.9	38.6	1.2	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease_2	PF13520.1	gi|449068136|ref|YP_007435218.1|	-	6.8e-29	100.6	56.6	1.1e-28	99.9	39.2	1.3	1	0	0	1	1	1	1	Amino	acid	permease
DUF2583	PF10762.4	gi|449068136|ref|YP_007435218.1|	-	0.99	9.5	6.6	1.8	8.7	2.0	3.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2583)
Cu_amine_oxid	PF01179.15	gi|449068137|ref|YP_007435219.1|	-	1.1e-161	538.2	0.0	1.3e-161	537.9	0.0	1.1	1	0	0	1	1	1	1	Copper	amine	oxidase,	enzyme	domain
Cu_amine_oxidN3	PF02728.11	gi|449068137|ref|YP_007435219.1|	-	1.1e-18	67.1	0.0	2.5e-18	66.0	0.0	1.7	1	0	0	1	1	1	1	Copper	amine	oxidase,	N3	domain
Cu_amine_oxidN2	PF02727.11	gi|449068137|ref|YP_007435219.1|	-	1.6e-11	44.0	0.1	3.1e-11	43.1	0.1	1.5	1	0	0	1	1	1	1	Copper	amine	oxidase,	N2	domain
HTH_10	PF04967.7	gi|449068138|ref|YP_007435220.1|	-	3.7e-22	77.6	0.3	7.9e-22	76.6	0.2	1.6	1	0	0	1	1	1	1	HTH	DNA	binding	domain
Sigma70_r4	PF04545.11	gi|449068138|ref|YP_007435220.1|	-	6.8e-07	28.4	0.2	1.6e-06	27.3	0.2	1.6	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_24	PF13412.1	gi|449068138|ref|YP_007435220.1|	-	0.00038	19.7	0.3	0.00038	19.7	0.2	2.1	2	0	0	2	2	1	1	Winged	helix-turn-helix	DNA-binding
HTH_26	PF13443.1	gi|449068138|ref|YP_007435220.1|	-	0.0049	17.0	0.1	0.017	15.3	0.1	1.9	1	0	0	1	1	1	1	Cro/C1-type	HTH	DNA-binding	domain
UPF0122	PF04297.9	gi|449068138|ref|YP_007435220.1|	-	0.017	15.1	2.4	0.14	12.1	0.2	2.5	2	0	0	2	2	2	0	Putative	helix-turn-helix	protein,	YlxM	/	p13	like
MarR	PF01047.17	gi|449068138|ref|YP_007435220.1|	-	0.018	14.7	0.0	0.048	13.3	0.0	1.8	1	1	0	1	1	1	0	MarR	family
HTH_27	PF13463.1	gi|449068138|ref|YP_007435220.1|	-	0.027	14.7	0.0	0.094	13.0	0.0	1.9	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
LexA_DNA_bind	PF01726.11	gi|449068138|ref|YP_007435220.1|	-	0.027	14.0	0.8	0.15	11.6	0.5	2.2	1	1	0	1	1	1	0	LexA	DNA	binding	domain
LRR_2	PF07723.8	gi|449068138|ref|YP_007435220.1|	-	0.029	14.8	0.0	0.08	13.4	0.0	1.8	1	0	0	1	1	1	0	Leucine	Rich	Repeat
MarR_2	PF12802.2	gi|449068138|ref|YP_007435220.1|	-	0.043	13.4	0.0	0.082	12.5	0.0	1.5	1	0	0	1	1	1	0	MarR	family
HTH_3	PF01381.17	gi|449068138|ref|YP_007435220.1|	-	0.044	13.6	0.1	0.11	12.4	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix
HTH_Mga	PF08280.6	gi|449068138|ref|YP_007435220.1|	-	0.044	13.5	1.1	0.32	10.7	0.1	2.8	2	1	0	2	2	2	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
GerE	PF00196.14	gi|449068138|ref|YP_007435220.1|	-	0.048	12.9	2.7	0.32	10.3	0.6	2.8	2	1	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
HTH_19	PF12844.2	gi|449068138|ref|YP_007435220.1|	-	0.053	13.5	0.2	0.19	11.8	0.1	2.0	3	0	0	3	3	1	0	Helix-turn-helix	domain
PCI	PF01399.22	gi|449068138|ref|YP_007435220.1|	-	0.058	13.7	1.1	0.1	12.8	0.2	1.9	2	1	0	2	2	2	0	PCI	domain
HTH_Tnp_ISL3	PF13542.1	gi|449068138|ref|YP_007435220.1|	-	0.092	11.9	0.0	0.39	9.9	0.0	2.1	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_17	PF12728.2	gi|449068138|ref|YP_007435220.1|	-	0.1	12.8	0.6	0.27	11.5	0.1	2.0	2	0	0	2	2	2	0	Helix-turn-helix	domain
NUMOD1	PF07453.8	gi|449068138|ref|YP_007435220.1|	-	0.13	12.1	0.2	0.9	9.4	0.0	2.5	3	0	0	3	3	3	0	NUMOD1	domain
HTH_38	PF13936.1	gi|449068138|ref|YP_007435220.1|	-	0.23	11.0	1.3	0.23	11.0	0.0	1.7	2	0	0	2	2	2	0	Helix-turn-helix	domain
LAGLIDADG_3	PF14528.1	gi|449068138|ref|YP_007435220.1|	-	1.5	9.0	4.6	10	6.4	0.3	3.1	2	2	0	2	2	2	0	LAGLIDADG-like	domain
DUF488	PF04343.8	gi|449068139|ref|YP_007435221.1|	-	2.6e-27	95.5	0.1	3.3e-27	95.2	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF488
Aldose_epim	PF01263.15	gi|449068140|ref|YP_007435222.1|	-	1.1e-35	123.2	0.0	2.7e-35	121.9	0.0	1.5	1	1	0	1	1	1	1	Aldose	1-epimerase
TrkA_N	PF02254.13	gi|449068141|ref|YP_007435223.1|	-	6.5e-17	61.6	0.3	1.1e-16	60.9	0.2	1.4	1	0	0	1	1	1	1	TrkA-N	domain
TrkA_C	PF02080.16	gi|449068141|ref|YP_007435223.1|	-	2.5e-05	23.7	0.2	0.00025	20.5	0.0	2.5	3	0	0	3	3	3	1	TrkA-C	domain
Ion_trans_2	PF07885.11	gi|449068141|ref|YP_007435223.1|	-	0.0063	16.2	8.5	0.012	15.2	5.9	1.5	1	0	0	1	1	1	1	Ion	channel
Amidohydro_2	PF04909.9	gi|449068142|ref|YP_007435224.1|	-	4.4e-20	72.3	0.0	7.5e-20	71.6	0.0	1.3	1	0	0	1	1	1	1	Amidohydrolase
Ribonuc_red_sm	PF00268.16	gi|449068144|ref|YP_007435226.1|	-	2.7e-14	52.8	0.7	7.5e-14	51.3	0.5	1.5	1	1	0	1	1	1	1	Ribonucleotide	reductase,	small	chain
Rubrerythrin	PF02915.12	gi|449068144|ref|YP_007435226.1|	-	4.4e-05	23.8	0.0	0.02	15.1	0.0	2.3	2	0	0	2	2	2	2	Rubrerythrin
AA_permease_2	PF13520.1	gi|449068145|ref|YP_007435227.1|	-	5e-44	150.5	53.8	5e-44	150.5	37.3	2.1	1	1	1	2	2	2	1	Amino	acid	permease
AA_permease	PF00324.16	gi|449068145|ref|YP_007435227.1|	-	1.4e-30	106.1	52.9	1.4e-30	106.1	36.6	2.3	1	1	2	3	3	3	1	Amino	acid	permease
DUF3487	PF11990.3	gi|449068145|ref|YP_007435227.1|	-	0.009	15.4	0.6	0.009	15.4	0.4	4.6	4	1	1	5	5	5	1	Protein	of	unknown	function	(DUF3487)
DUF4328	PF14219.1	gi|449068145|ref|YP_007435227.1|	-	0.43	9.8	0.0	0.43	9.8	0.0	3.9	4	1	1	6	6	6	0	Domain	of	unknown	function	(DUF4328)
Neurensin	PF14927.1	gi|449068145|ref|YP_007435227.1|	-	2.3	7.5	7.6	0.47	9.8	1.9	2.3	2	1	0	2	2	2	0	Neurensin
Malate_synthase	PF01274.17	gi|449068146|ref|YP_007435228.1|	-	2.8e-42	144.4	0.0	4.4e-38	130.5	0.0	2.2	2	0	0	2	2	2	2	Malate	synthase
ICL	PF00463.16	gi|449068147|ref|YP_007435229.1|	-	1.3e-151	505.4	0.4	4.9e-84	282.4	0.0	2.0	1	1	1	2	2	2	2	Isocitrate	lyase	family
PEP_mutase	PF13714.1	gi|449068147|ref|YP_007435229.1|	-	1.3e-16	60.5	0.0	2.6e-16	59.5	0.0	1.5	1	1	0	1	1	1	1	Phosphoenolpyruvate	phosphomutase
PIN	PF01850.16	gi|449068148|ref|YP_007435230.1|	-	1.2e-06	28.8	0.0	1.7e-06	28.3	0.0	1.2	1	0	0	1	1	1	1	PIN	domain
Antitoxin-MazE	PF04014.13	gi|449068149|ref|YP_007435231.1|	-	3e-12	45.9	0.2	4.6e-12	45.3	0.1	1.3	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
SH3_9	PF14604.1	gi|449068149|ref|YP_007435231.1|	-	0.012	15.1	0.0	0.18	11.3	0.0	2.1	1	1	0	1	1	1	0	Variant	SH3	domain
TraC	PF07820.7	gi|449068149|ref|YP_007435231.1|	-	0.095	12.8	0.0	0.1	12.7	0.0	1.2	1	0	0	1	1	1	0	TraC-like	protein
PaREP1	PF05942.6	gi|449068151|ref|YP_007435233.1|	-	1.2e-21	76.6	0.1	1.5e-21	76.4	0.1	1.1	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
MR_MLE_C	PF13378.1	gi|449068152|ref|YP_007435234.1|	-	5e-20	71.5	0.0	1.2e-19	70.3	0.0	1.6	2	0	0	2	2	2	1	Enolase	C-terminal	domain-like
MR_MLE	PF01188.16	gi|449068152|ref|YP_007435234.1|	-	2.9e-18	66.1	0.4	3.8e-17	62.5	0.0	2.4	2	0	0	2	2	2	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
MR_MLE_N	PF02746.11	gi|449068152|ref|YP_007435234.1|	-	5.9e-10	39.1	0.0	9.7e-10	38.4	0.0	1.3	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	N-terminal	domain
B5	PF03484.10	gi|449068152|ref|YP_007435234.1|	-	0.017	14.9	0.0	2.2	8.1	0.0	3.3	4	0	0	4	4	4	0	tRNA	synthetase	B5	domain
His_biosynth	PF00977.16	gi|449068152|ref|YP_007435234.1|	-	0.025	13.8	0.0	0.044	13.0	0.0	1.4	1	0	0	1	1	1	0	Histidine	biosynthesis	protein
Rhodanese	PF00581.15	gi|449068154|ref|YP_007435236.1|	-	1.6e-43	147.6	0.2	2.8e-22	79.2	0.0	2.2	2	0	0	2	2	2	2	Rhodanese-like	domain
DUF1803	PF08820.5	gi|449068155|ref|YP_007435237.1|	-	0.03	14.0	0.2	0.039	13.6	0.2	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1803)
CCD	PF07860.6	gi|449068155|ref|YP_007435237.1|	-	0.042	13.3	0.0	0.064	12.7	0.0	1.3	1	0	0	1	1	1	0	WisP	family	C-Terminal	Region
TP_methylase	PF00590.15	gi|449068156|ref|YP_007435238.1|	-	1.7e-41	142.2	0.0	1.9e-41	142.1	0.0	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
NIR_SIR	PF01077.17	gi|449068157|ref|YP_007435239.1|	-	4.2e-36	123.6	0.0	2.8e-32	111.2	0.0	3.1	2	2	0	2	2	2	2	Nitrite	and	sulphite	reductase	4Fe-4S	domain
NIR_SIR_ferr	PF03460.12	gi|449068157|ref|YP_007435239.1|	-	2.3e-24	84.8	0.7	6.1e-11	41.7	0.0	4.2	4	1	0	4	4	4	2	Nitrite/Sulfite	reductase	ferredoxin-like	half	domain
PAPS_reduct	PF01507.14	gi|449068159|ref|YP_007435241.1|	-	5.2e-46	156.6	0.1	6.2e-46	156.3	0.0	1.1	1	0	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
Oligomerisation	PF02410.10	gi|449068159|ref|YP_007435241.1|	-	0.017	15.1	0.0	0.031	14.2	0.0	1.4	1	0	0	1	1	1	0	Oligomerisation	domain
ATP-sulfurylase	PF01747.12	gi|449068160|ref|YP_007435242.1|	-	1.1e-80	269.9	0.0	1.5e-80	269.6	0.0	1.1	1	0	0	1	1	1	1	ATP-sulfurylase
PUA_2	PF14306.1	gi|449068160|ref|YP_007435242.1|	-	8.9e-43	145.4	0.1	1.5e-42	144.7	0.0	1.3	1	0	0	1	1	1	1	PUA-like	domain
TF_Zn_Ribbon	PF08271.7	gi|449068160|ref|YP_007435242.1|	-	0.00028	20.1	0.5	0.00085	18.6	0.4	1.8	1	0	0	1	1	1	1	TFIIB	zinc-binding
ADH_N	PF08240.7	gi|449068162|ref|YP_007435244.1|	-	4.1e-24	84.4	1.1	6.4e-23	80.6	0.8	2.2	1	1	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|449068162|ref|YP_007435244.1|	-	1.4e-15	57.0	0.0	1.1e-14	54.0	0.0	2.2	1	1	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|449068162|ref|YP_007435244.1|	-	2.1e-12	48.0	0.0	4.9e-12	46.8	0.0	1.7	1	1	0	1	1	1	1	Zinc-binding	dehydrogenase
Epimerase	PF01370.16	gi|449068162|ref|YP_007435244.1|	-	0.013	14.9	0.1	0.022	14.1	0.0	1.4	1	0	0	1	1	1	0	NAD	dependent	epimerase/dehydratase	family
Polysacc_synt_2	PF02719.10	gi|449068162|ref|YP_007435244.1|	-	0.029	13.2	0.1	0.044	12.6	0.1	1.3	1	0	0	1	1	1	0	Polysaccharide	biosynthesis	protein
ThiF	PF00899.16	gi|449068162|ref|YP_007435244.1|	-	0.098	12.4	0.7	0.22	11.3	0.5	1.6	1	0	0	1	1	1	0	ThiF	family
adh_short	PF00106.20	gi|449068162|ref|YP_007435244.1|	-	0.11	12.3	0.0	0.21	11.5	0.0	1.5	1	0	0	1	1	1	0	short	chain	dehydrogenase
BPL_LplA_LipB	PF03099.14	gi|449068163|ref|YP_007435245.1|	-	1.2e-07	31.7	0.0	2.3e-07	30.8	0.0	1.4	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
Lip_prot_lig_C	PF10437.4	gi|449068163|ref|YP_007435245.1|	-	2.9e-05	23.6	0.5	8.3e-05	22.1	0.1	2.0	2	0	0	2	2	2	1	Bacterial	lipoate	protein	ligase	C-terminus
AMP-binding	PF00501.23	gi|449068164|ref|YP_007435246.1|	-	1.2e-66	224.8	0.0	1.5e-66	224.5	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|449068164|ref|YP_007435246.1|	-	0.00013	22.7	0.0	0.00023	22.0	0.0	1.4	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
3HCDH_N	PF02737.13	gi|449068165|ref|YP_007435247.1|	-	2.8e-64	216.0	0.9	5.4e-64	215.1	0.6	1.5	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
ECH	PF00378.15	gi|449068165|ref|YP_007435247.1|	-	1.8e-48	164.8	0.0	2.9e-48	164.1	0.0	1.3	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
3HCDH	PF00725.17	gi|449068165|ref|YP_007435247.1|	-	5.3e-45	151.7	0.1	2e-23	82.5	0.0	2.6	2	0	0	2	2	2	2	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
NAD_binding_2	PF03446.10	gi|449068165|ref|YP_007435247.1|	-	0.00027	20.7	0.0	0.00066	19.5	0.0	1.7	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.18	gi|449068165|ref|YP_007435247.1|	-	0.0069	16.1	0.3	0.016	14.9	0.2	1.7	1	1	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
F420_oxidored	PF03807.12	gi|449068165|ref|YP_007435247.1|	-	0.0096	16.3	0.1	0.031	14.7	0.0	1.9	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
2-Hacid_dh_C	PF02826.14	gi|449068165|ref|YP_007435247.1|	-	0.011	14.9	0.1	0.022	13.9	0.1	1.5	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Pyr_redox	PF00070.22	gi|449068165|ref|YP_007435247.1|	-	0.014	15.7	0.1	0.099	13.0	0.1	2.3	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
UDPG_MGDP_dh_N	PF03721.9	gi|449068165|ref|YP_007435247.1|	-	0.085	12.2	0.2	0.23	10.7	0.0	1.9	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
XdhC_C	PF13478.1	gi|449068165|ref|YP_007435247.1|	-	0.095	13.0	0.0	0.22	11.8	0.0	1.6	1	0	0	1	1	1	0	XdhC	Rossmann	domain
Dimerisation	PF08100.6	gi|449068165|ref|YP_007435247.1|	-	0.33	10.8	2.2	0.63	9.9	0.2	2.4	3	0	0	3	3	3	0	Dimerisation	domain
TrkA_N	PF02254.13	gi|449068165|ref|YP_007435247.1|	-	0.54	10.2	3.6	3.5	7.6	0.4	3.3	3	1	0	3	3	3	0	TrkA-N	domain
Thiolase_N	PF00108.18	gi|449068166|ref|YP_007435248.1|	-	5.3e-13	48.5	0.2	8.1e-11	41.3	0.0	2.4	2	0	0	2	2	2	2	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.13	gi|449068166|ref|YP_007435248.1|	-	8.1e-09	34.9	0.1	1.8e-06	27.3	0.0	2.8	2	0	0	2	2	2	2	Thiolase,	C-terminal	domain
ACP_syn_III	PF08545.5	gi|449068166|ref|YP_007435248.1|	-	2.6e-07	30.1	0.1	1e-05	25.0	0.0	2.4	2	0	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
ketoacyl-synt	PF00109.21	gi|449068166|ref|YP_007435248.1|	-	1.3e-06	28.0	0.8	1.3e-06	28.0	0.5	2.6	2	1	1	3	3	3	1	Beta-ketoacyl	synthase,	N-terminal	domain
FAE1_CUT1_RppA	PF08392.7	gi|449068166|ref|YP_007435248.1|	-	0.00034	19.7	0.0	0.00064	18.8	0.0	1.3	1	0	0	1	1	1	1	FAE1/Type	III	polyketide	synthase-like	protein
DUF35	PF01796.12	gi|449068167|ref|YP_007435249.1|	-	1.9e-13	50.4	0.0	3.1e-13	49.7	0.0	1.4	1	0	0	1	1	1	1	DUF35	OB-fold	domain
DUF35_N	PF12172.3	gi|449068167|ref|YP_007435249.1|	-	8.1e-11	41.5	0.1	1.2e-10	40.9	0.0	1.3	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Auto_anti-p27	PF06677.7	gi|449068167|ref|YP_007435249.1|	-	0.00034	20.3	1.3	0.0015	18.2	0.5	2.0	2	0	0	2	2	2	1	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
AMP-binding	PF00501.23	gi|449068168|ref|YP_007435250.1|	-	3.4e-78	262.8	0.0	4.2e-78	262.5	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|449068168|ref|YP_007435250.1|	-	4.9e-17	62.6	0.0	1e-16	61.5	0.0	1.6	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
Ribonuc_red_sm	PF00268.16	gi|449068169|ref|YP_007435251.1|	-	9.1e-09	34.7	0.0	3.8e-08	32.6	0.0	1.8	1	1	0	1	1	1	1	Ribonucleotide	reductase,	small	chain
AurF	PF11583.3	gi|449068169|ref|YP_007435251.1|	-	0.00083	18.3	0.1	0.46	9.3	0.0	2.4	2	0	0	2	2	2	2	P-aminobenzoate	N-oxygenase	AurF
Rubrerythrin	PF02915.12	gi|449068169|ref|YP_007435251.1|	-	0.098	12.9	0.3	1.5	9.1	0.0	2.7	2	1	1	3	3	3	0	Rubrerythrin
Abhydrolase_6	PF12697.2	gi|449068170|ref|YP_007435252.1|	-	8.1e-33	114.2	0.0	9.6e-33	113.9	0.0	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|449068170|ref|YP_007435252.1|	-	8.7e-21	74.5	0.3	6.5e-18	65.1	0.2	2.2	1	1	0	1	1	1	1	alpha/beta	hydrolase	fold
Abhydrolase_5	PF12695.2	gi|449068170|ref|YP_007435252.1|	-	2.7e-19	69.3	0.0	2.8e-18	66.0	0.0	2.0	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Peptidase_S9	PF00326.16	gi|449068170|ref|YP_007435252.1|	-	0.00049	19.3	0.3	0.27	10.4	0.0	2.4	2	1	0	2	2	2	2	Prolyl	oligopeptidase	family
FSH1	PF03959.8	gi|449068170|ref|YP_007435252.1|	-	0.0036	16.7	0.0	0.0074	15.7	0.0	1.6	1	1	0	1	1	1	1	Serine	hydrolase	(FSH1)
Abhydrolase_4	PF08386.5	gi|449068170|ref|YP_007435252.1|	-	0.009	15.8	0.0	0.014	15.3	0.0	1.2	1	0	0	1	1	1	1	TAP-like	protein
TAT_signal	PF10518.4	gi|449068170|ref|YP_007435252.1|	-	0.028	14.4	0.6	0.06	13.3	0.4	1.5	1	0	0	1	1	1	0	TAT	(twin-arginine	translocation)	pathway	signal	sequence
PGAP1	PF07819.8	gi|449068170|ref|YP_007435252.1|	-	0.041	13.4	0.0	0.07	12.7	0.0	1.4	1	0	0	1	1	1	0	PGAP1-like	protein
DUF2048	PF09752.4	gi|449068170|ref|YP_007435252.1|	-	0.065	12.0	0.0	0.22	10.3	0.0	1.7	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2048)
DLH	PF01738.13	gi|449068170|ref|YP_007435252.1|	-	0.073	12.3	0.0	0.52	9.5	0.0	1.9	2	0	0	2	2	2	0	Dienelactone	hydrolase	family
Thioesterase	PF00975.15	gi|449068170|ref|YP_007435252.1|	-	0.17	12.0	0.1	0.27	11.4	0.1	1.2	1	0	0	1	1	1	0	Thioesterase	domain
Rifin_STEVOR	PF02009.11	gi|449068171|ref|YP_007435253.1|	-	0.00012	21.8	4.4	0.00018	21.2	3.0	1.3	1	0	0	1	1	1	1	Rifin/stevor	family
Pex24p	PF06398.6	gi|449068171|ref|YP_007435253.1|	-	0.0084	14.9	1.5	0.013	14.2	1.0	1.3	1	0	0	1	1	1	1	Integral	peroxisomal	membrane	peroxin
AJAP1_PANP_C	PF15298.1	gi|449068171|ref|YP_007435253.1|	-	0.41	10.5	16.0	0.67	9.8	11.1	1.2	1	0	0	1	1	1	0	AJAP1/PANP	C-terminus
DUF1180	PF06679.7	gi|449068171|ref|YP_007435253.1|	-	5.6	6.8	7.6	2.6	7.9	3.6	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1180)
SCP2	PF02036.12	gi|449068173|ref|YP_007435255.1|	-	0.0013	19.0	0.0	0.002	18.3	0.0	1.4	1	0	0	1	1	1	1	SCP-2	sterol	transfer	family
TFCD_C	PF12612.3	gi|449068173|ref|YP_007435255.1|	-	0.092	12.1	0.0	0.13	11.6	0.0	1.3	1	0	0	1	1	1	0	Tubulin	folding	cofactor	D	C	terminal
Acyl-CoA_dh_1	PF00441.19	gi|449068174|ref|YP_007435256.1|	-	2.1e-42	144.7	3.6	3.2e-42	144.1	2.5	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.11	gi|449068174|ref|YP_007435256.1|	-	8.3e-32	110.1	0.6	2e-30	105.6	0.0	2.7	3	0	0	3	3	3	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|449068174|ref|YP_007435256.1|	-	1.3e-21	75.8	0.1	2.5e-21	74.9	0.1	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.6	gi|449068174|ref|YP_007435256.1|	-	2.1e-19	70.1	3.0	3.4e-19	69.4	2.1	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
PucR	PF07905.6	gi|449068174|ref|YP_007435256.1|	-	0.059	12.9	0.1	1	8.9	0.0	2.5	2	1	1	3	3	3	0	Purine	catabolism	regulatory	protein-like	family
3HCDH_N	PF02737.13	gi|449068175|ref|YP_007435257.1|	-	3.1e-64	215.9	1.1	4.6e-64	215.3	0.8	1.3	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
ECH	PF00378.15	gi|449068175|ref|YP_007435257.1|	-	9.4e-55	185.3	0.0	1.7e-54	184.5	0.0	1.4	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
3HCDH	PF00725.17	gi|449068175|ref|YP_007435257.1|	-	1.5e-34	118.2	0.0	1.3e-23	83.2	0.0	2.5	2	0	0	2	2	2	2	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
NAD_Gly3P_dh_N	PF01210.18	gi|449068175|ref|YP_007435257.1|	-	8e-09	35.4	0.1	1.8e-08	34.2	0.0	1.6	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
NAD_binding_2	PF03446.10	gi|449068175|ref|YP_007435257.1|	-	4.6e-05	23.3	0.1	9e-05	22.3	0.1	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Pyr_redox	PF00070.22	gi|449068175|ref|YP_007435257.1|	-	5.4e-05	23.5	0.4	0.00022	21.5	0.3	2.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
UDPG_MGDP_dh_N	PF03721.9	gi|449068175|ref|YP_007435257.1|	-	7.4e-05	22.2	0.4	0.00021	20.7	0.3	1.8	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Saccharop_dh	PF03435.13	gi|449068175|ref|YP_007435257.1|	-	0.0022	17.0	0.1	0.0039	16.2	0.1	1.4	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
F420_oxidored	PF03807.12	gi|449068175|ref|YP_007435257.1|	-	0.0033	17.8	0.5	0.015	15.6	0.2	2.3	2	1	0	2	2	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
AlaDh_PNT_C	PF01262.16	gi|449068175|ref|YP_007435257.1|	-	0.0069	15.9	0.1	0.015	14.8	0.1	1.6	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
ECH_C	PF13766.1	gi|449068175|ref|YP_007435257.1|	-	0.0072	16.4	0.0	0.018	15.2	0.0	1.6	1	0	0	1	1	1	1	2-enoyl-CoA	Hydratase	C-terminal	region
NAD_binding_7	PF13241.1	gi|449068175|ref|YP_007435257.1|	-	0.0076	16.4	0.2	0.018	15.2	0.1	1.7	1	0	0	1	1	1	1	Putative	NAD(P)-binding
TrkA_N	PF02254.13	gi|449068175|ref|YP_007435257.1|	-	0.016	15.1	1.0	0.088	12.8	0.6	2.5	1	1	0	1	1	1	0	TrkA-N	domain
OTCace	PF00185.19	gi|449068175|ref|YP_007435257.1|	-	0.15	11.9	0.1	0.38	10.6	0.0	1.7	1	0	0	1	1	1	0	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
ThiF	PF00899.16	gi|449068175|ref|YP_007435257.1|	-	0.17	11.7	0.7	36	4.1	0.1	3.0	2	1	1	3	3	3	0	ThiF	family
SCP2	PF02036.12	gi|449068176|ref|YP_007435258.1|	-	0.0087	16.3	0.0	0.015	15.6	0.0	1.4	1	1	0	1	1	1	1	SCP-2	sterol	transfer	family
Ribonuc_red_sm	PF00268.16	gi|449068177|ref|YP_007435259.1|	-	5.2e-05	22.3	3.3	0.00034	19.7	2.3	2.1	1	1	0	1	1	1	1	Ribonucleotide	reductase,	small	chain
Rubrerythrin	PF02915.12	gi|449068177|ref|YP_007435259.1|	-	0.024	14.9	0.6	0.74	10.1	0.2	2.4	2	0	0	2	2	2	0	Rubrerythrin
Haem_oxygenas_2	PF14518.1	gi|449068177|ref|YP_007435259.1|	-	0.027	14.6	0.1	0.43	10.7	0.0	2.3	1	1	1	2	2	2	0	Iron-containing	redox	enzyme
COXG	PF06240.8	gi|449068178|ref|YP_007435260.1|	-	3.2e-09	36.5	0.1	4e-09	36.2	0.0	1.1	1	0	0	1	1	1	1	Carbon	monoxide	dehydrogenase	subunit	G	(CoxG)
ADH_N	PF08240.7	gi|449068179|ref|YP_007435261.1|	-	7.2e-31	106.1	0.4	1.4e-30	105.2	0.2	1.5	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|449068179|ref|YP_007435261.1|	-	3.4e-24	84.8	0.0	5.9e-24	84.0	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|449068179|ref|YP_007435261.1|	-	1.6e-05	25.8	0.0	4.8e-05	24.2	0.0	1.7	2	0	0	2	2	2	1	Zinc-binding	dehydrogenase
AlaDh_PNT_C	PF01262.16	gi|449068179|ref|YP_007435261.1|	-	6.9e-05	22.4	2.8	0.00024	20.7	0.4	2.1	1	1	1	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
2-Hacid_dh_C	PF02826.14	gi|449068179|ref|YP_007435261.1|	-	0.0031	16.6	0.2	0.0061	15.7	0.1	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
ELFV_dehydrog	PF00208.16	gi|449068179|ref|YP_007435261.1|	-	0.015	14.8	1.3	0.36	10.3	0.2	2.2	2	0	0	2	2	2	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
ThiF	PF00899.16	gi|449068179|ref|YP_007435261.1|	-	0.12	12.1	2.2	0.5	10.1	1.4	1.9	1	1	1	2	2	2	0	ThiF	family
Peptidase_C25_C	PF03785.9	gi|449068179|ref|YP_007435261.1|	-	1.3	8.8	5.6	2.9	7.7	0.8	2.3	2	0	0	2	2	2	0	Peptidase	family	C25,	C	terminal	ig-like	domain
AMP-binding	PF00501.23	gi|449068180|ref|YP_007435262.1|	-	4.5e-88	295.4	0.0	5.8e-88	295.0	0.0	1.2	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|449068180|ref|YP_007435262.1|	-	1.4e-15	57.9	0.0	2.7e-15	57.0	0.0	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
COXG	PF06240.8	gi|449068181|ref|YP_007435263.1|	-	3e-17	62.5	0.3	3.5e-17	62.3	0.2	1.0	1	0	0	1	1	1	1	Carbon	monoxide	dehydrogenase	subunit	G	(CoxG)
AhpC-TSA	PF00578.16	gi|449068182|ref|YP_007435264.1|	-	2.6e-34	117.5	0.0	3.2e-34	117.2	0.0	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|449068182|ref|YP_007435264.1|	-	6.2e-21	74.4	0.0	7.1e-21	74.2	0.0	1.0	1	0	0	1	1	1	1	Redoxin
DUF899	PF05988.7	gi|449068182|ref|YP_007435264.1|	-	0.002	17.6	0.0	0.002	17.5	0.0	1.1	1	0	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF899)
Thioredoxin_8	PF13905.1	gi|449068182|ref|YP_007435264.1|	-	0.025	14.6	0.1	0.046	13.8	0.1	1.5	1	0	0	1	1	1	0	Thioredoxin-like
AhpC-TSA_2	PF13911.1	gi|449068182|ref|YP_007435264.1|	-	0.086	12.7	0.0	0.14	12.0	0.0	1.4	1	1	0	1	1	1	0	AhpC/TSA	antioxidant	enzyme
POR	PF01558.13	gi|449068183|ref|YP_007435265.1|	-	3.1e-33	115.1	0.3	3.7e-33	114.8	0.2	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
DUF4530	PF15039.1	gi|449068183|ref|YP_007435265.1|	-	0.1	12.5	0.0	0.74	9.7	0.0	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4530)
TPP_enzyme_C	PF02775.16	gi|449068184|ref|YP_007435266.1|	-	1.1e-20	73.8	0.0	2.2e-20	72.7	0.0	1.6	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
POR_N	PF01855.14	gi|449068184|ref|YP_007435266.1|	-	3.1e-14	53.0	0.1	1e-13	51.3	0.0	1.8	2	0	0	2	2	2	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Fer4_10	PF13237.1	gi|449068184|ref|YP_007435266.1|	-	1.5e-09	37.4	11.9	2.9e-09	36.5	8.2	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|449068184|ref|YP_007435266.1|	-	1.5e-09	38.0	22.5	1.8e-06	28.2	8.3	2.4	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|449068184|ref|YP_007435266.1|	-	2.1e-09	36.6	15.2	2.2e-07	30.1	4.1	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
TPP_enzyme_N	PF02776.13	gi|449068184|ref|YP_007435266.1|	-	5.6e-09	35.7	0.2	1.4e-05	24.6	0.0	2.3	2	0	0	2	2	2	2	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
Fer4_2	PF12797.2	gi|449068184|ref|YP_007435266.1|	-	1.3e-07	31.0	15.3	5.7e-06	25.9	2.8	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|449068184|ref|YP_007435266.1|	-	9.8e-07	28.3	22.3	2.5e-05	23.9	3.6	2.9	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|449068184|ref|YP_007435266.1|	-	1.2e-05	25.4	12.2	3.4e-05	24.0	8.4	1.9	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Transketolase_C	PF02780.15	gi|449068184|ref|YP_007435266.1|	-	1.9e-05	24.6	0.3	0.00053	19.9	0.0	2.7	3	0	0	3	3	2	1	Transketolase,	C-terminal	domain
Fer4_8	PF13183.1	gi|449068184|ref|YP_007435266.1|	-	2.5e-05	24.1	20.5	0.00025	20.9	7.3	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|449068184|ref|YP_007435266.1|	-	0.0001	22.0	12.1	0.00027	20.7	7.9	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|449068184|ref|YP_007435266.1|	-	0.001	19.3	8.3	0.02	15.2	1.0	2.6	1	1	2	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|449068184|ref|YP_007435266.1|	-	0.0018	18.9	11.6	0.0072	17.0	1.4	2.7	1	1	3	4	4	4	2	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.2	gi|449068184|ref|YP_007435266.1|	-	0.0044	17.2	3.8	0.0044	17.2	2.6	2.7	3	0	0	3	3	2	1	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|449068184|ref|YP_007435266.1|	-	0.006	17.0	7.5	0.006	17.0	5.2	3.1	3	0	0	3	3	3	1	4Fe-4S	binding	domain
DXP_synthase_N	PF13292.1	gi|449068184|ref|YP_007435266.1|	-	0.049	12.5	0.3	0.48	9.3	0.2	2.2	2	1	1	3	3	3	0	1-deoxy-D-xylulose-5-phosphate	synthase
Glyco_transf_90	PF05686.7	gi|449068184|ref|YP_007435266.1|	-	0.061	12.0	0.0	0.11	11.2	0.0	1.3	1	0	0	1	1	1	0	Glycosyl	transferase	family	90
Fer4_18	PF13746.1	gi|449068184|ref|YP_007435266.1|	-	0.066	13.6	12.9	0.053	13.9	2.7	2.7	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|449068184|ref|YP_007435266.1|	-	0.11	13.0	14.1	0.14	12.7	2.0	2.8	2	1	1	3	3	2	0	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.1	gi|449068184|ref|YP_007435266.1|	-	1.2	9.5	14.7	3.6	8.0	3.0	2.8	1	1	1	2	2	2	0	4Fe-4S	single	cluster	domain
DUF35_N	PF12172.3	gi|449068185|ref|YP_007435267.1|	-	1.1e-09	37.9	0.0	1.7e-09	37.3	0.0	1.3	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF35	PF01796.12	gi|449068185|ref|YP_007435267.1|	-	0.00023	21.3	0.0	0.00033	20.8	0.0	1.3	1	0	0	1	1	1	1	DUF35	OB-fold	domain
DZR	PF12773.2	gi|449068185|ref|YP_007435267.1|	-	0.071	12.9	0.1	0.22	11.3	0.1	1.8	2	0	0	2	2	2	0	Double	zinc	ribbon
zinc_ribbon_6	PF14599.1	gi|449068185|ref|YP_007435267.1|	-	0.89	9.3	4.7	20	5.0	0.2	2.9	2	1	1	3	3	3	0	Zinc-ribbon
DUF35_N	PF12172.3	gi|449068186|ref|YP_007435268.1|	-	3.1e-07	30.1	0.1	5.8e-07	29.2	0.1	1.4	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF35	PF01796.12	gi|449068186|ref|YP_007435268.1|	-	7.6e-05	22.8	0.2	0.00011	22.3	0.2	1.3	1	0	0	1	1	1	1	DUF35	OB-fold	domain
Thiolase_C	PF02803.13	gi|449068187|ref|YP_007435269.1|	-	0.0011	18.3	0.0	1	8.7	0.0	2.5	2	0	0	2	2	2	2	Thiolase,	C-terminal	domain
Thiolase_N	PF00108.18	gi|449068187|ref|YP_007435269.1|	-	0.01	14.8	0.2	0.34	9.8	0.0	2.2	2	0	0	2	2	2	0	Thiolase,	N-terminal	domain
ACP_syn_III	PF08545.5	gi|449068187|ref|YP_007435269.1|	-	0.051	13.2	0.0	1.7	8.3	0.0	2.4	2	0	0	2	2	2	0	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Acyl-CoA_dh_1	PF00441.19	gi|449068189|ref|YP_007435271.1|	-	2.3e-42	144.6	0.0	4.1e-42	143.8	0.0	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|449068189|ref|YP_007435271.1|	-	5.4e-19	67.4	0.8	9.2e-19	66.7	0.1	1.7	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_N	PF02771.11	gi|449068189|ref|YP_007435271.1|	-	2.7e-15	56.9	0.0	8e-15	55.3	0.0	1.8	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_2	PF08028.6	gi|449068189|ref|YP_007435271.1|	-	2.5e-12	47.2	0.0	4.4e-11	43.1	0.0	2.2	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
AMP-binding	PF00501.23	gi|449068190|ref|YP_007435272.1|	-	1.1e-74	251.2	0.0	1.4e-74	251.0	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|449068190|ref|YP_007435272.1|	-	2e-12	47.8	0.1	2.5e-11	44.3	0.0	2.3	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
HTH_IclR	PF09339.5	gi|449068191|ref|YP_007435273.1|	-	2.4e-10	39.8	0.0	3.7e-10	39.2	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_24	PF13412.1	gi|449068191|ref|YP_007435273.1|	-	2.9e-07	29.7	0.2	5.9e-07	28.7	0.2	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.14	gi|449068191|ref|YP_007435273.1|	-	5.1e-07	29.3	1.1	1.1e-06	28.2	0.2	1.8	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|449068191|ref|YP_007435273.1|	-	4.2e-06	26.3	0.0	8.5e-06	25.3	0.0	1.5	1	0	0	1	1	1	1	MarR	family
HTH_20	PF12840.2	gi|449068191|ref|YP_007435273.1|	-	4.9e-06	26.2	0.0	8.2e-06	25.5	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_27	PF13463.1	gi|449068191|ref|YP_007435273.1|	-	5.5e-06	26.6	0.1	9.8e-06	25.8	0.1	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_28	PF13518.1	gi|449068191|ref|YP_007435273.1|	-	0.00064	19.6	0.1	0.0013	18.7	0.1	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|449068191|ref|YP_007435273.1|	-	0.0011	18.5	0.0	0.0019	17.7	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_23	PF13384.1	gi|449068191|ref|YP_007435273.1|	-	0.003	17.1	0.0	0.0054	16.3	0.0	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_45	PF14947.1	gi|449068191|ref|YP_007435273.1|	-	0.0069	16.1	0.6	0.016	14.9	0.1	1.8	2	0	0	2	2	2	1	Winged	helix-turn-helix
HTH_36	PF13730.1	gi|449068191|ref|YP_007435273.1|	-	0.0073	16.4	0.0	0.014	15.4	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_8	PF02954.14	gi|449068191|ref|YP_007435273.1|	-	0.016	14.7	0.3	0.027	14.0	0.2	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	Fis	family
Phage_AlpA	PF05930.7	gi|449068191|ref|YP_007435273.1|	-	0.017	14.8	0.0	0.034	13.8	0.0	1.5	1	0	0	1	1	1	0	Prophage	CP4-57	regulatory	protein	(AlpA)
DUF2250	PF10007.4	gi|449068191|ref|YP_007435273.1|	-	0.061	13.2	0.3	0.091	12.6	0.2	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_29	PF13551.1	gi|449068191|ref|YP_007435273.1|	-	0.063	13.4	0.1	0.11	12.6	0.0	1.4	1	0	0	1	1	1	0	Winged	helix-turn	helix
HTH_AsnC-type	PF13404.1	gi|449068191|ref|YP_007435273.1|	-	0.16	11.5	0.4	0.69	9.5	0.2	2.1	1	1	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
DUF1628	PF07790.6	gi|449068193|ref|YP_007435275.1|	-	0.022	15.4	1.1	0.041	14.6	0.3	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1628)
DUF237	PF03072.9	gi|449068193|ref|YP_007435275.1|	-	0.024	14.5	0.9	0.22	11.4	0.6	2.0	1	1	0	1	1	1	0	MG032/MG096/MG288	family	1
Adeno_E3_14_5	PF04834.7	gi|449068193|ref|YP_007435275.1|	-	0.079	13.3	0.3	0.14	12.5	0.2	1.5	1	0	0	1	1	1	0	Early	E3	14.5	kDa	protein
Zip	PF02535.17	gi|449068194|ref|YP_007435276.1|	-	0.00013	21.1	6.4	0.00013	21.1	4.5	2.8	2	1	0	3	3	3	2	ZIP	Zinc	transporter
Flavin_Reduct	PF01613.13	gi|449068195|ref|YP_007435277.1|	-	5.4e-31	107.5	0.0	6.1e-31	107.3	0.0	1.0	1	0	0	1	1	1	1	Flavin	reductase	like	domain
DUF447	PF04289.7	gi|449068195|ref|YP_007435277.1|	-	0.052	13.0	0.0	0.07	12.6	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF447)
LigB	PF02900.13	gi|449068196|ref|YP_007435278.1|	-	3.9e-54	183.4	0.0	4.3e-54	183.3	0.0	1.0	1	0	0	1	1	1	1	Catalytic	LigB	subunit	of	aromatic	ring-opening	dioxygenase
Memo	PF01875.12	gi|449068196|ref|YP_007435278.1|	-	0.00061	18.7	0.0	0.0013	17.6	0.0	1.6	1	1	1	2	2	2	1	Memo-like	protein
Ta0938	PF11494.3	gi|449068197|ref|YP_007435279.1|	-	4.5e-61	203.5	4.0	4.9e-61	203.4	2.8	1.0	1	0	0	1	1	1	1	Ta0938
YHS	PF04945.8	gi|449068197|ref|YP_007435279.1|	-	0.14	12.0	0.8	0.14	12.0	0.5	2.0	2	0	0	2	2	2	0	YHS	domain
LRV_FeS	PF05484.6	gi|449068197|ref|YP_007435279.1|	-	0.18	11.3	1.5	1.2	8.7	0.1	2.1	1	1	1	2	2	2	0	LRV	protein	FeS4	cluster
zf-H2C2_2	PF13465.1	gi|449068197|ref|YP_007435279.1|	-	0.33	11.3	0.2	0.33	11.3	0.1	1.7	2	0	0	2	2	2	0	Zinc-finger	double	domain
TENA_THI-4	PF03070.11	gi|449068198|ref|YP_007435280.1|	-	3.9e-37	128.0	0.1	5.4e-37	127.5	0.1	1.1	1	0	0	1	1	1	1	TENA/THI-4/PQQC	family
Haem_oxygenas_2	PF14518.1	gi|449068198|ref|YP_007435280.1|	-	0.0029	17.7	0.0	0.0081	16.3	0.0	1.8	1	0	0	1	1	1	1	Iron-containing	redox	enzyme
Amidohydro_2	PF04909.9	gi|449068199|ref|YP_007435281.1|	-	5.4e-40	137.6	0.0	6.3e-40	137.4	0.0	1.1	1	0	0	1	1	1	1	Amidohydrolase
TatD_DNase	PF01026.16	gi|449068199|ref|YP_007435281.1|	-	0.023	13.8	0.0	0.11	11.6	0.0	1.9	1	1	0	1	1	1	0	TatD	related	DNase
Amidohydro_2	PF04909.9	gi|449068200|ref|YP_007435282.1|	-	7e-45	153.6	0.1	1.4e-44	152.6	0.1	1.5	1	1	0	1	1	1	1	Amidohydrolase
D-ser_dehydrat	PF14031.1	gi|449068200|ref|YP_007435282.1|	-	0.09	12.9	0.0	0.15	12.2	0.0	1.4	1	0	0	1	1	1	0	Putative	serine	dehydratase	domain
FAD_binding_5	PF00941.16	gi|449068201|ref|YP_007435283.1|	-	3.7e-50	169.6	0.0	5.6e-50	169.1	0.0	1.3	1	0	0	1	1	1	1	FAD	binding	domain	in	molybdopterin	dehydrogenase
Fer2_2	PF01799.15	gi|449068201|ref|YP_007435283.1|	-	2.7e-20	72.0	0.2	5.6e-20	71.0	0.2	1.5	1	0	0	1	1	1	1	[2Fe-2S]	binding	domain
CO_deh_flav_C	PF03450.12	gi|449068201|ref|YP_007435283.1|	-	3e-08	33.5	0.1	1.5e-07	31.3	0.0	2.1	2	1	0	2	2	2	1	CO	dehydrogenase	flavoprotein	C-terminal	domain
Fer2	PF00111.22	gi|449068201|ref|YP_007435283.1|	-	1.7e-07	30.8	0.6	4.7e-07	29.4	0.1	2.0	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer2_3	PF13085.1	gi|449068201|ref|YP_007435283.1|	-	1.1e-05	25.1	0.2	3.5e-05	23.5	0.1	1.8	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Ald_Xan_dh_C2	PF02738.13	gi|449068202|ref|YP_007435284.1|	-	4e-96	322.5	0.0	6e-96	321.9	0.0	1.2	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|449068202|ref|YP_007435284.1|	-	2.3e-12	46.9	0.0	4.2e-12	46.1	0.0	1.5	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
DUF357	PF04010.8	gi|449068202|ref|YP_007435284.1|	-	0.06	13.0	0.2	0.19	11.4	0.1	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF357)
BEN	PF10523.4	gi|449068203|ref|YP_007435285.1|	-	0.038	14.0	0.6	0.77	9.8	0.0	2.0	1	1	1	2	2	2	0	BEN	domain
GerA	PF03323.8	gi|449068203|ref|YP_007435285.1|	-	0.16	10.0	0.4	0.19	9.8	0.3	1.0	1	0	0	1	1	1	0	Bacillus/Clostridium	GerA	spore	germination	protein
Fer4_11	PF13247.1	gi|449068204|ref|YP_007435286.1|	-	1.3e-16	60.2	1.9	1.9e-16	59.7	1.3	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|449068204|ref|YP_007435286.1|	-	1.6e-11	43.2	18.3	1.1e-07	31.1	2.1	4.0	4	0	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|449068204|ref|YP_007435286.1|	-	1e-10	41.8	20.4	4.5e-08	33.3	5.2	2.6	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|449068204|ref|YP_007435286.1|	-	1.4e-09	37.3	16.6	2.5e-07	30.2	1.4	3.6	3	1	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|449068204|ref|YP_007435286.1|	-	4.5e-08	33.2	18.7	1.4e-05	25.2	5.2	2.4	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|449068204|ref|YP_007435286.1|	-	1.6e-05	24.6	18.3	0.00013	21.7	1.5	2.4	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|449068204|ref|YP_007435286.1|	-	2.1e-05	24.1	8.6	2.1e-05	24.1	5.9	2.1	1	1	1	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|449068204|ref|YP_007435286.1|	-	3e-05	23.6	2.5	3e-05	23.6	1.7	2.9	3	1	0	3	3	3	1	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|449068204|ref|YP_007435286.1|	-	3.1e-05	24.2	19.8	0.0015	18.9	2.1	3.2	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|449068204|ref|YP_007435286.1|	-	0.0002	22.0	10.2	0.47	11.2	0.1	3.6	3	1	0	3	3	3	2	4Fe-4S	double	cluster	binding	domain
DmsC	PF04976.7	gi|449068204|ref|YP_007435286.1|	-	0.00059	19.1	8.1	0.0044	16.3	5.5	2.1	1	1	0	1	1	1	1	DMSO	reductase	anchor	subunit	(DmsC)
Fer4_4	PF12800.2	gi|449068204|ref|YP_007435286.1|	-	0.0013	18.8	2.5	0.0013	18.8	1.7	3.0	3	1	0	3	3	3	1	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|449068204|ref|YP_007435286.1|	-	0.017	15.4	4.6	0.23	11.9	1.8	2.6	2	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|449068204|ref|YP_007435286.1|	-	0.052	13.5	10.8	0.1	12.6	6.1	2.3	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|449068204|ref|YP_007435286.1|	-	0.6	10.5	10.4	0.42	10.9	1.9	2.8	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|449068204|ref|YP_007435286.1|	-	0.82	10.1	10.8	0.088	13.2	2.2	2.8	3	0	0	3	3	3	0	4Fe-4S	single	cluster	domain
Fer4_15	PF13459.1	gi|449068204|ref|YP_007435286.1|	-	0.95	10.0	10.0	1.8	9.1	4.4	2.8	2	1	0	2	2	2	0	4Fe-4S	single	cluster	domain
POR	PF01558.13	gi|449068205|ref|YP_007435287.1|	-	1.4e-35	122.7	0.0	1.7e-35	122.4	0.0	1.1	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
Gpi1	PF05024.10	gi|449068205|ref|YP_007435287.1|	-	0.11	12.1	0.0	0.17	11.5	0.0	1.4	1	0	0	1	1	1	0	N-acetylglucosaminyl	transferase	component	(Gpi1)
Fer4	PF00037.22	gi|449068206|ref|YP_007435288.1|	-	8.6e-16	56.8	14.3	9.8e-09	34.4	2.9	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|449068206|ref|YP_007435288.1|	-	4.1e-13	48.9	19.6	1.1e-09	37.9	7.2	1.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|449068206|ref|YP_007435288.1|	-	2.1e-12	46.3	13.3	1.4e-06	27.9	2.5	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|449068206|ref|YP_007435288.1|	-	1.5e-11	43.9	8.9	2.2e-11	43.4	6.1	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|449068206|ref|YP_007435288.1|	-	2.9e-11	42.6	13.8	1.3e-06	27.9	2.0	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|449068206|ref|YP_007435288.1|	-	1.9e-10	40.9	12.5	2.6e-10	40.4	8.6	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|449068206|ref|YP_007435288.1|	-	6.2e-08	32.7	13.3	8.8e-08	32.2	9.3	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|449068206|ref|YP_007435288.1|	-	1.7e-07	31.5	6.6	0.0011	19.3	0.1	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|449068206|ref|YP_007435288.1|	-	2.4e-07	31.3	9.6	0.00052	20.7	1.3	2.2	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.2	gi|449068206|ref|YP_007435288.1|	-	5.5e-07	29.4	13.6	0.0014	18.8	1.4	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|449068206|ref|YP_007435288.1|	-	2e-06	28.2	10.5	0.003	18.1	0.3	2.7	2	1	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.1	gi|449068206|ref|YP_007435288.1|	-	3.8e-06	27.1	8.5	0.0017	18.7	0.4	2.2	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_17	PF13534.1	gi|449068206|ref|YP_007435288.1|	-	1.3e-05	25.4	5.9	0.016	15.5	0.1	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|449068206|ref|YP_007435288.1|	-	2.3e-05	24.3	14.1	0.00051	20.0	10.0	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|449068206|ref|YP_007435288.1|	-	0.0058	17.1	17.8	0.026	15.0	4.7	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_11	PF13247.1	gi|449068206|ref|YP_007435288.1|	-	0.014	15.2	5.6	0.02	14.7	3.8	1.3	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
POR_N	PF01855.14	gi|449068207|ref|YP_007435289.1|	-	8.6e-69	231.5	0.2	1.1e-68	231.1	0.1	1.1	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Transketolase_C	PF02780.15	gi|449068207|ref|YP_007435289.1|	-	1.2e-05	25.2	0.0	2.8e-05	24.0	0.0	1.6	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
TPP_enzyme_N	PF02776.13	gi|449068207|ref|YP_007435289.1|	-	6.9e-05	22.4	0.2	0.00021	20.8	0.3	1.6	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
PALP	PF00291.20	gi|449068207|ref|YP_007435289.1|	-	0.029	13.5	0.2	0.043	13.0	0.1	1.2	1	0	0	1	1	1	0	Pyridoxal-phosphate	dependent	enzyme
TPP_enzyme_C	PF02775.16	gi|449068208|ref|YP_007435290.1|	-	1.1e-23	83.4	0.2	1.8e-23	82.7	0.1	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
DXP_synthase_N	PF13292.1	gi|449068208|ref|YP_007435290.1|	-	0.00019	20.4	0.5	0.00086	18.3	0.2	1.8	1	1	1	2	2	2	1	1-deoxy-D-xylulose-5-phosphate	synthase
E1_dh	PF00676.15	gi|449068208|ref|YP_007435290.1|	-	0.0002	20.2	0.3	0.00029	19.6	0.2	1.2	1	0	0	1	1	1	1	Dehydrogenase	E1	component
Aldo_ket_red	PF00248.16	gi|449068209|ref|YP_007435291.1|	-	2.5e-66	223.3	0.0	2.9e-66	223.1	0.0	1.0	1	0	0	1	1	1	1	Aldo/keto	reductase	family
TPP_enzyme_N	PF02776.13	gi|449068210|ref|YP_007435292.1|	-	1.5e-43	148.2	0.0	1.1e-41	142.1	0.0	2.4	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|449068210|ref|YP_007435292.1|	-	2.4e-34	118.1	0.3	3.6e-33	114.2	0.0	2.5	2	1	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.17	gi|449068210|ref|YP_007435292.1|	-	4.6e-22	78.2	0.0	1.3e-21	76.8	0.0	1.8	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
CW_binding_2	PF04122.7	gi|449068210|ref|YP_007435292.1|	-	0.00077	19.6	0.0	0.24	11.6	0.0	2.6	2	0	0	2	2	2	2	Putative	cell	wall	binding	repeat	2
DUF1404	PF07185.6	gi|449068211|ref|YP_007435293.1|	-	5.3e-65	218.1	22.1	6.1e-65	217.9	15.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1404)
DUF3681	PF12442.3	gi|449068213|ref|YP_007435295.1|	-	0.014	15.5	1.8	0.019	15.1	0.7	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3681)
DUF389	PF04087.9	gi|449068213|ref|YP_007435295.1|	-	0.051	13.5	4.9	0.049	13.5	2.8	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF389)
PsbI	PF02532.9	gi|449068213|ref|YP_007435295.1|	-	0.76	9.4	2.9	2.5	7.8	0.4	2.5	2	0	0	2	2	2	0	Photosystem	II	reaction	centre	I	protein	(PSII	4.8	kDa	protein)
COX2	PF00116.15	gi|449068214|ref|YP_007435296.1|	-	2.5e-19	69.2	0.2	3.1e-18	65.7	0.1	2.0	1	1	0	1	1	1	1	Cytochrome	C	oxidase	subunit	II,	periplasmic	domain
Cupredoxin_1	PF13473.1	gi|449068214|ref|YP_007435296.1|	-	2.4e-06	27.3	0.0	3.1e-06	27.0	0.0	1.3	1	0	0	1	1	1	1	Cupredoxin-like	domain
Cytochrom_B_N_2	PF13631.1	gi|449068215|ref|YP_007435297.1|	-	2.1e-29	102.4	10.1	2.1e-29	102.4	7.0	2.7	3	1	1	4	4	4	1	Cytochrome	b(N-terminal)/b6/petB
Cytochrom_B_N	PF00033.14	gi|449068215|ref|YP_007435297.1|	-	2.9e-08	33.3	10.0	2.9e-08	33.3	7.0	2.9	3	1	0	3	3	3	1	Cytochrome	b(N-terminal)/b6/petB
Cytochrom_B_C	PF00032.12	gi|449068215|ref|YP_007435297.1|	-	9.1e-05	22.6	1.8	9.1e-05	22.6	1.2	3.8	4	1	1	5	5	5	1	Cytochrome	b(C-terminal)/b6/petD
Rieske	PF00355.21	gi|449068216|ref|YP_007435298.1|	-	4.5e-18	64.6	0.0	6.9e-18	64.0	0.0	1.3	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
SoxE	PF06525.6	gi|449068217|ref|YP_007435299.1|	-	8.1e-82	273.2	17.7	9.5e-82	273.0	12.3	1.0	1	0	0	1	1	1	1	Sulfocyanin	(SoxE)
Copper-bind	PF00127.15	gi|449068217|ref|YP_007435299.1|	-	0.034	14.3	0.0	0.069	13.3	0.0	1.6	1	1	0	1	1	1	0	Copper	binding	proteins,	plastocyanin/azurin	family
Cu-oxidase_2	PF07731.9	gi|449068217|ref|YP_007435299.1|	-	0.042	13.3	0.2	1.9	7.9	0.0	2.2	2	0	0	2	2	2	0	Multicopper	oxidase
COX1	PF00115.15	gi|449068218|ref|YP_007435300.1|	-	6.7e-140	466.6	54.5	6.7e-140	466.6	37.8	2.6	2	1	0	2	2	2	1	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
COX3	PF00510.13	gi|449068218|ref|YP_007435300.1|	-	1.7e-18	66.9	17.1	1.7e-18	66.9	11.9	2.4	3	0	0	3	3	3	1	Cytochrome	c	oxidase	subunit	III
DUF1404	PF07185.6	gi|449068219|ref|YP_007435301.1|	-	2.3e-55	186.7	25.2	2.7e-55	186.5	17.5	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1404)
Caa3_CtaG	PF09678.5	gi|449068219|ref|YP_007435301.1|	-	0.00053	18.9	12.5	0.00053	18.9	8.7	2.2	1	1	1	2	2	2	2	Cytochrome	c	oxidase	caa3	assembly	factor	(Caa3_CtaG)
RNA_pol_Rpc34	PF05158.7	gi|449068221|ref|YP_007435303.1|	-	5.2e-05	22.5	0.1	5.5e-05	22.5	0.1	1.0	1	0	0	1	1	1	1	RNA	polymerase	Rpc34	subunit
TrmB	PF01978.14	gi|449068221|ref|YP_007435303.1|	-	0.00062	19.4	1.3	0.0014	18.3	0.9	1.6	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HxlR	PF01638.12	gi|449068221|ref|YP_007435303.1|	-	0.002	17.7	0.8	0.0023	17.5	0.5	1.1	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_34	PF13601.1	gi|449068221|ref|YP_007435303.1|	-	0.0021	18.0	0.0	0.0026	17.7	0.0	1.1	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
TFIIE_alpha	PF02002.12	gi|449068221|ref|YP_007435303.1|	-	0.003	17.0	0.3	0.0033	16.9	0.2	1.1	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HTH_24	PF13412.1	gi|449068221|ref|YP_007435303.1|	-	0.0046	16.3	0.8	0.0066	15.8	0.6	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_20	PF12840.2	gi|449068221|ref|YP_007435303.1|	-	0.0084	15.8	0.1	0.011	15.5	0.1	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_36	PF13730.1	gi|449068221|ref|YP_007435303.1|	-	0.0096	16.0	0.2	0.016	15.2	0.2	1.4	1	1	0	1	1	1	1	Helix-turn-helix	domain
MarR_2	PF12802.2	gi|449068221|ref|YP_007435303.1|	-	0.028	14.0	0.0	0.032	13.8	0.0	1.1	1	0	0	1	1	1	0	MarR	family
HTH_5	PF01022.15	gi|449068221|ref|YP_007435303.1|	-	0.045	13.4	0.4	0.067	12.8	0.1	1.5	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
HTH_43	PF09904.4	gi|449068221|ref|YP_007435303.1|	-	0.099	12.4	0.1	0.12	12.1	0.1	1.2	1	0	0	1	1	1	0	Winged	helix-turn	helix
HTH_11	PF08279.7	gi|449068221|ref|YP_007435303.1|	-	0.16	11.6	0.6	0.22	11.1	0.4	1.1	1	0	0	1	1	1	0	HTH	domain
Rhodanese	PF00581.15	gi|449068222|ref|YP_007435304.1|	-	6.1e-12	45.8	0.0	9.9e-12	45.2	0.0	1.3	1	0	0	1	1	1	1	Rhodanese-like	domain
AIRS_C	PF02769.17	gi|449068223|ref|YP_007435305.1|	-	0.0022	17.9	0.0	0.0043	17.0	0.0	1.5	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
DUF2490	PF10677.4	gi|449068223|ref|YP_007435305.1|	-	0.082	12.1	0.0	0.14	11.4	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2490)
FAD_binding_5	PF00941.16	gi|449068224|ref|YP_007435306.1|	-	3.1e-51	173.2	0.0	4.5e-51	172.6	0.0	1.2	1	0	0	1	1	1	1	FAD	binding	domain	in	molybdopterin	dehydrogenase
CO_deh_flav_C	PF03450.12	gi|449068224|ref|YP_007435306.1|	-	1.9e-26	92.0	0.0	3.6e-26	91.0	0.0	1.5	1	0	0	1	1	1	1	CO	dehydrogenase	flavoprotein	C-terminal	domain
Fer2_2	PF01799.15	gi|449068225|ref|YP_007435307.1|	-	2.6e-32	110.5	2.0	2.7e-32	110.4	0.0	1.8	2	0	0	2	2	2	1	[2Fe-2S]	binding	domain
Fer2	PF00111.22	gi|449068225|ref|YP_007435307.1|	-	5.2e-05	22.9	2.8	0.00012	21.8	0.2	2.1	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer2_3	PF13085.1	gi|449068225|ref|YP_007435307.1|	-	0.0011	18.7	2.3	0.0011	18.7	1.6	1.5	1	1	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Ald_Xan_dh_C2	PF02738.13	gi|449068226|ref|YP_007435308.1|	-	2.9e-133	445.0	0.0	3.6e-133	444.7	0.0	1.0	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|449068226|ref|YP_007435308.1|	-	9.7e-24	83.5	0.0	3.1e-23	81.9	0.0	1.9	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
Rubrerythrin	PF02915.12	gi|449068227|ref|YP_007435309.1|	-	8.5e-25	87.6	3.4	1.3e-24	87.0	2.4	1.3	1	1	0	1	1	1	1	Rubrerythrin
Ferritin	PF00210.19	gi|449068227|ref|YP_007435309.1|	-	3.8e-10	39.6	2.2	0.00011	21.9	0.6	2.0	1	1	1	2	2	2	2	Ferritin-like	domain
FA_desaturase_2	PF03405.9	gi|449068227|ref|YP_007435309.1|	-	0.05	12.3	0.0	1.2	7.8	0.0	2.0	2	0	0	2	2	2	0	Fatty	acid	desaturase
PSD4	PF07631.6	gi|449068227|ref|YP_007435309.1|	-	0.058	13.7	0.2	5.6	7.3	0.0	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1592)
Peptidase_C10	PF01640.12	gi|449068227|ref|YP_007435309.1|	-	0.11	12.3	0.1	0.3	10.8	0.0	1.7	1	1	1	2	2	2	0	Peptidase	C10	family
Ferritin_2	PF13668.1	gi|449068227|ref|YP_007435309.1|	-	0.22	11.4	3.1	4.1	7.3	0.3	2.1	1	1	1	2	2	2	0	Ferritin-like	domain
CCG	PF02754.11	gi|449068228|ref|YP_007435310.1|	-	6.2e-19	67.7	1.9	1.7e-10	40.7	0.0	3.2	3	1	1	4	4	4	2	Cysteine-rich	domain
Fer4_8	PF13183.1	gi|449068228|ref|YP_007435310.1|	-	2.1e-05	24.4	6.1	5.2e-05	23.1	4.0	1.9	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|449068228|ref|YP_007435310.1|	-	0.0001	22.6	5.1	0.00035	20.8	3.5	2.0	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|449068228|ref|YP_007435310.1|	-	0.0002	21.0	8.2	0.013	15.4	0.5	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|449068228|ref|YP_007435310.1|	-	0.00023	21.3	6.5	0.00055	20.1	4.5	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|449068228|ref|YP_007435310.1|	-	0.00036	20.8	8.0	0.0019	18.4	5.6	2.1	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|449068228|ref|YP_007435310.1|	-	0.0039	17.4	13.3	0.012	15.8	1.2	2.5	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|449068228|ref|YP_007435310.1|	-	0.0082	15.9	9.3	0.38	10.5	7.5	2.4	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|449068228|ref|YP_007435310.1|	-	0.0087	15.6	12.8	0.21	11.2	1.8	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|449068228|ref|YP_007435310.1|	-	0.14	12.0	12.5	4.7	7.1	2.0	2.4	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|449068228|ref|YP_007435310.1|	-	0.25	11.7	5.6	7.3	7.0	0.6	2.6	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|449068228|ref|YP_007435310.1|	-	1.8	8.5	14.8	2.4	8.1	1.9	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
DUF3501	PF12007.3	gi|449068229|ref|YP_007435311.1|	-	9.7e-45	152.6	0.0	1.1e-44	152.4	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3501)
CorA	PF01544.13	gi|449068230|ref|YP_007435312.1|	-	9.3e-20	70.8	2.3	1.3e-19	70.3	1.6	1.1	1	0	0	1	1	1	1	CorA-like	Mg2+	transporter	protein
SUR7	PF06687.7	gi|449068230|ref|YP_007435312.1|	-	0.41	10.1	4.8	0.65	9.5	3.3	1.4	1	1	0	1	1	1	0	SUR7/PalI	family
AIRS_C	PF02769.17	gi|449068231|ref|YP_007435313.1|	-	1e-13	51.5	0.0	1.6e-13	50.9	0.0	1.4	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|449068231|ref|YP_007435313.1|	-	1.2e-08	35.0	0.0	3.1e-08	33.7	0.0	1.7	2	0	0	2	2	2	1	AIR	synthase	related	protein,	N-terminal	domain
Pro-kuma_activ	PF09286.6	gi|449068232|ref|YP_007435314.1|	-	1.2e-24	86.9	1.2	2.8e-24	85.7	0.0	2.0	2	0	0	2	2	2	1	Pro-kumamolisin,	activation	domain
Peptidase_S8	PF00082.17	gi|449068232|ref|YP_007435314.1|	-	4.2e-07	29.3	1.8	4.2e-07	29.3	1.2	2.4	2	0	0	2	2	2	1	Subtilase	family
Big_3_4	PF13754.1	gi|449068232|ref|YP_007435314.1|	-	0.0042	17.3	16.0	0.1	12.9	2.6	4.5	3	1	0	3	3	3	2	Bacterial	Ig-like	domain	(group	3)
YjcZ	PF13990.1	gi|449068232|ref|YP_007435314.1|	-	0.12	11.5	0.1	0.24	10.4	0.1	1.4	1	0	0	1	1	1	0	YjcZ-like	protein
DJ-1_PfpI	PF01965.19	gi|449068233|ref|YP_007435315.1|	-	1.2e-39	135.0	0.0	1.4e-39	134.8	0.0	1.1	1	0	0	1	1	1	1	DJ-1/PfpI	family
DUF4066	PF13278.1	gi|449068233|ref|YP_007435315.1|	-	4.8e-10	38.9	0.0	6e-10	38.6	0.0	1.1	1	0	0	1	1	1	1	Putative	amidotransferase
GATase	PF00117.23	gi|449068233|ref|YP_007435315.1|	-	0.0069	15.8	0.0	0.0086	15.5	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|449068233|ref|YP_007435315.1|	-	0.036	13.5	0.0	0.044	13.2	0.0	1.3	1	0	0	1	1	1	0	Peptidase	C26
TPP_enzyme_N	PF02776.13	gi|449068236|ref|YP_007435318.1|	-	5.8e-40	136.5	0.0	8.6e-40	136.0	0.0	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|449068236|ref|YP_007435318.1|	-	4.1e-18	65.3	0.3	1.1e-16	60.8	0.0	2.4	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.17	gi|449068236|ref|YP_007435318.1|	-	6.9e-08	32.3	0.0	1.4e-06	28.0	0.0	2.4	1	1	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
DXP_synthase_N	PF13292.1	gi|449068236|ref|YP_007435318.1|	-	0.12	11.2	0.0	0.64	8.8	0.0	2.1	2	0	0	2	2	2	0	1-deoxy-D-xylulose-5-phosphate	synthase
Sugar_tr	PF00083.19	gi|449068237|ref|YP_007435319.1|	-	1.9e-33	115.7	35.0	3.4e-25	88.5	8.3	2.0	1	1	1	2	2	2	2	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|449068237|ref|YP_007435319.1|	-	5e-26	91.2	63.1	5.8e-20	71.3	20.6	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
TENA_THI-4	PF03070.11	gi|449068238|ref|YP_007435320.1|	-	2.2e-15	56.9	0.1	7.7e-15	55.2	0.1	1.8	1	1	0	1	1	1	1	TENA/THI-4/PQQC	family
Acetyltransf_1	PF00583.19	gi|449068239|ref|YP_007435321.1|	-	5.8e-12	45.4	0.0	9.8e-12	44.7	0.0	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_3	PF13302.1	gi|449068239|ref|YP_007435321.1|	-	3.1e-11	43.6	0.0	4e-11	43.2	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|449068239|ref|YP_007435321.1|	-	1.1e-08	35.2	0.0	1.3e-08	34.9	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|449068239|ref|YP_007435321.1|	-	2.2e-07	30.9	0.1	5.4e-07	29.6	0.1	1.6	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.1	gi|449068239|ref|YP_007435321.1|	-	8.3e-07	29.0	0.0	1.4e-06	28.3	0.0	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|449068239|ref|YP_007435321.1|	-	1.6e-06	27.7	0.0	2.6e-06	27.0	0.0	1.4	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_9	PF13527.1	gi|449068239|ref|YP_007435321.1|	-	0.00012	21.9	0.2	0.0062	16.4	0.1	2.3	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.1	gi|449068239|ref|YP_007435321.1|	-	0.00076	19.3	0.0	0.0026	17.6	0.0	1.8	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
SinI	PF08671.5	gi|449068239|ref|YP_007435321.1|	-	0.067	12.6	0.3	0.067	12.6	0.2	1.8	2	0	0	2	2	2	0	Anti-repressor	SinI
Acetyltransf_CG	PF14542.1	gi|449068239|ref|YP_007435321.1|	-	0.07	13.0	0.0	0.19	11.6	0.0	1.7	2	0	0	2	2	2	0	GCN5-related	N-acetyl-transferase
ECH	PF00378.15	gi|449068240|ref|YP_007435322.1|	-	6.5e-47	159.7	0.0	7.2e-47	159.5	0.0	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
ECH	PF00378.15	gi|449068241|ref|YP_007435323.1|	-	6.1e-77	258.0	1.5	7.1e-77	257.8	1.1	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
Peptidase_S49	PF01343.13	gi|449068241|ref|YP_007435323.1|	-	1.3e-05	25.0	0.3	0.00029	20.6	0.1	2.6	2	0	0	2	2	2	1	Peptidase	family	S49
ECH_C	PF13766.1	gi|449068241|ref|YP_007435323.1|	-	0.051	13.7	0.0	0.13	12.4	0.0	1.7	1	0	0	1	1	1	0	2-enoyl-CoA	Hydratase	C-terminal	region
DUF2191	PF09957.4	gi|449068241|ref|YP_007435323.1|	-	0.18	11.6	0.7	5.5	6.8	0.4	3.0	2	1	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2191)
Pyr_redox_2	PF07992.9	gi|449068242|ref|YP_007435324.1|	-	8.5e-29	100.8	0.0	1.5e-27	96.8	0.0	3.2	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|449068242|ref|YP_007435324.1|	-	3.3e-19	69.0	0.0	7.8e-17	61.4	0.1	3.1	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Reductase_C	PF14759.1	gi|449068242|ref|YP_007435324.1|	-	3.1e-12	46.6	0.0	5.8e-12	45.7	0.0	1.5	1	0	0	1	1	1	1	Reductase	C-terminal
Pyr_redox_3	PF13738.1	gi|449068242|ref|YP_007435324.1|	-	9.3e-11	42.1	0.9	0.0057	16.7	0.0	4.1	4	0	0	4	4	4	2	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|449068242|ref|YP_007435324.1|	-	2.8e-08	33.0	0.2	0.0033	16.3	0.0	3.6	3	1	1	4	4	4	2	FAD	dependent	oxidoreductase
Lycopene_cycl	PF05834.7	gi|449068242|ref|YP_007435324.1|	-	0.00011	21.2	0.1	0.12	11.2	0.0	3.4	3	1	1	4	4	4	1	Lycopene	cyclase	protein
NAD_binding_9	PF13454.1	gi|449068242|ref|YP_007435324.1|	-	0.00012	21.8	2.1	13	5.5	0.0	4.2	2	2	2	4	4	4	0	FAD-NAD(P)-binding
K_oxygenase	PF13434.1	gi|449068242|ref|YP_007435324.1|	-	0.0011	17.9	0.0	0.45	9.3	0.0	2.2	1	1	1	2	2	2	2	L-lysine	6-monooxygenase	(NADPH-requiring)
HI0933_like	PF03486.9	gi|449068242|ref|YP_007435324.1|	-	0.0013	17.3	0.6	1.3	7.4	0.0	2.9	4	0	0	4	4	4	2	HI0933-like	protein
Shikimate_DH	PF01488.15	gi|449068242|ref|YP_007435324.1|	-	0.0023	18.0	0.1	0.12	12.4	0.0	3.0	4	0	0	4	4	4	1	Shikimate	/	quinate	5-dehydrogenase
AdoHcyase_NAD	PF00670.16	gi|449068242|ref|YP_007435324.1|	-	0.0058	16.4	0.1	0.24	11.2	0.0	2.5	2	0	0	2	2	2	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
NAD_binding_8	PF13450.1	gi|449068242|ref|YP_007435324.1|	-	0.0099	15.8	0.7	0.39	10.7	0.0	2.8	3	0	0	3	3	3	1	NAD(P)-binding	Rossmann-like	domain
AlaDh_PNT_C	PF01262.16	gi|449068242|ref|YP_007435324.1|	-	0.014	14.9	0.1	5.7	6.4	0.0	2.7	3	0	0	3	3	3	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
CPSase_L_chain	PF00289.17	gi|449068242|ref|YP_007435324.1|	-	0.019	15.0	0.0	0.14	12.2	0.0	2.2	2	0	0	2	2	2	0	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
GIDA	PF01134.17	gi|449068242|ref|YP_007435324.1|	-	0.019	13.8	2.8	4.8	5.9	0.1	3.8	3	1	1	4	4	4	0	Glucose	inhibited	division	protein	A
TrkA_N	PF02254.13	gi|449068242|ref|YP_007435324.1|	-	0.042	13.8	0.1	3.8	7.5	0.0	2.5	2	0	0	2	2	2	0	TrkA-N	domain
2-Hacid_dh_C	PF02826.14	gi|449068242|ref|YP_007435324.1|	-	0.066	12.3	0.0	0.13	11.3	0.0	1.5	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
ThiF	PF00899.16	gi|449068242|ref|YP_007435324.1|	-	0.079	12.7	0.1	2.3	8.0	0.1	2.4	2	0	0	2	2	2	0	ThiF	family
Thiolase_N	PF00108.18	gi|449068243|ref|YP_007435325.1|	-	6.1e-11	41.7	0.3	1.4e-10	40.6	0.0	1.6	2	0	0	2	2	2	1	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.13	gi|449068243|ref|YP_007435325.1|	-	7.4e-10	38.3	0.2	9.5e-09	34.7	0.0	2.6	3	0	0	3	3	3	1	Thiolase,	C-terminal	domain
ketoacyl-synt	PF00109.21	gi|449068243|ref|YP_007435325.1|	-	7.4e-06	25.6	5.4	0.002	17.6	2.4	2.4	1	1	0	2	2	2	2	Beta-ketoacyl	synthase,	N-terminal	domain
ACP_syn_III	PF08545.5	gi|449068243|ref|YP_007435325.1|	-	0.018	14.7	0.8	0.038	13.6	0.6	1.5	1	0	0	1	1	1	0	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Ketoacyl-synt_C	PF02801.17	gi|449068243|ref|YP_007435325.1|	-	0.54	10.1	6.0	11	5.8	0.0	3.7	5	0	0	5	5	5	0	Beta-ketoacyl	synthase,	C-terminal	domain
4HBT	PF03061.17	gi|449068244|ref|YP_007435326.1|	-	5e-12	45.7	0.0	7.7e-12	45.1	0.0	1.3	1	0	0	1	1	1	1	Thioesterase	superfamily
DUF4442	PF14539.1	gi|449068244|ref|YP_007435326.1|	-	0.00017	21.6	0.0	0.00027	20.9	0.0	1.4	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4442)
INCA1	PF15142.1	gi|449068244|ref|YP_007435326.1|	-	0.036	13.8	0.0	0.086	12.6	0.0	1.7	2	1	0	2	2	2	0	INCA1
AMP-binding_C_2	PF14535.1	gi|449068245|ref|YP_007435327.1|	-	6.4e-17	61.3	0.6	1.6e-16	60.1	0.4	1.7	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
AMP-binding	PF00501.23	gi|449068245|ref|YP_007435327.1|	-	1.8e-15	56.3	0.3	3.2e-15	55.4	0.2	1.5	1	1	0	1	1	1	1	AMP-binding	enzyme
LuxE	PF04443.7	gi|449068245|ref|YP_007435327.1|	-	1.4e-06	27.2	0.0	0.00017	20.4	0.0	2.1	2	0	0	2	2	2	2	Acyl-protein	synthetase,	LuxE
GH3	PF03321.8	gi|449068245|ref|YP_007435327.1|	-	6.1e-06	25.0	0.2	0.016	13.7	0.0	2.1	2	0	0	2	2	2	2	GH3	auxin-responsive	promoter
DUF35	PF01796.12	gi|449068246|ref|YP_007435328.1|	-	3.6e-14	52.7	0.1	5.7e-14	52.1	0.1	1.3	1	0	0	1	1	1	1	DUF35	OB-fold	domain
DUF35_N	PF12172.3	gi|449068246|ref|YP_007435328.1|	-	4.9e-11	42.2	0.0	7.6e-11	41.6	0.0	1.3	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
TFIIS_C	PF01096.13	gi|449068246|ref|YP_007435328.1|	-	0.0034	16.9	0.3	0.25	11.0	0.0	2.2	2	0	0	2	2	2	1	Transcription	factor	S-II	(TFIIS)
NOB1_Zn_bind	PF08772.6	gi|449068246|ref|YP_007435328.1|	-	0.0087	15.8	0.1	0.013	15.2	0.0	1.4	1	0	0	1	1	1	1	Nin	one	binding	(NOB1)	Zn-ribbon	like
DZR	PF12773.2	gi|449068246|ref|YP_007435328.1|	-	0.085	12.6	0.9	0.13	12.1	0.6	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
Rubrerythrin	PF02915.12	gi|449068247|ref|YP_007435329.1|	-	8.4e-06	26.1	0.1	3e-05	24.3	0.0	1.9	2	0	0	2	2	2	1	Rubrerythrin
AurF	PF11583.3	gi|449068247|ref|YP_007435329.1|	-	0.00089	18.2	0.0	0.3	9.9	0.0	2.3	2	0	0	2	2	2	2	P-aminobenzoate	N-oxygenase	AurF
FA_desaturase_2	PF03405.9	gi|449068247|ref|YP_007435329.1|	-	0.022	13.5	0.0	3.5	6.3	0.0	2.1	2	0	0	2	2	2	0	Fatty	acid	desaturase
HpaB_N	PF11794.3	gi|449068248|ref|YP_007435330.1|	-	1.3e-76	257.5	0.0	1.7e-76	257.0	0.0	1.2	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
HpaB	PF03241.8	gi|449068248|ref|YP_007435330.1|	-	6.6e-53	178.6	0.0	1e-52	178.0	0.0	1.2	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	C	terminal
Glyoxalase	PF00903.20	gi|449068249|ref|YP_007435331.1|	-	2e-23	82.7	0.7	5.5e-11	42.5	0.1	2.3	2	0	0	2	2	2	2	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase_2	PF12681.2	gi|449068249|ref|YP_007435331.1|	-	2.2e-14	53.9	0.1	8.8e-09	35.9	0.0	2.4	2	0	0	2	2	2	2	Glyoxalase-like	domain
Glyoxalase_4	PF13669.1	gi|449068249|ref|YP_007435331.1|	-	6.6e-08	32.5	0.0	0.089	12.8	0.0	3.5	2	2	0	2	2	2	2	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase_3	PF13468.1	gi|449068249|ref|YP_007435331.1|	-	0.0046	16.8	0.0	0.11	12.4	0.0	2.8	2	1	1	3	3	3	1	Glyoxalase-like	domain
HTH_10	PF04967.7	gi|449068250|ref|YP_007435332.1|	-	5e-20	70.8	0.1	9.5e-20	69.9	0.0	1.5	1	0	0	1	1	1	1	HTH	DNA	binding	domain
DUF1492	PF07374.6	gi|449068250|ref|YP_007435332.1|	-	0.0029	17.6	0.2	0.68	10.0	0.0	2.4	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF1492)
HTH_24	PF13412.1	gi|449068250|ref|YP_007435332.1|	-	0.0074	15.6	0.3	0.91	8.9	0.0	3.3	4	0	0	4	4	4	1	Winged	helix-turn-helix	DNA-binding
Homeobox	PF00046.24	gi|449068250|ref|YP_007435332.1|	-	0.038	13.6	0.0	0.097	12.3	0.0	1.6	1	0	0	1	1	1	0	Homeobox	domain
Memo	PF01875.12	gi|449068250|ref|YP_007435332.1|	-	0.12	11.2	0.0	0.15	10.8	0.0	1.1	1	0	0	1	1	1	0	Memo-like	protein
Pirin	PF02678.11	gi|449068251|ref|YP_007435333.1|	-	6.6e-36	122.4	0.0	1.5e-35	121.2	0.0	1.6	2	0	0	2	2	2	1	Pirin
Pirin_C	PF05726.8	gi|449068251|ref|YP_007435333.1|	-	1.2e-24	86.3	0.0	3.1e-24	85.0	0.0	1.7	2	0	0	2	2	2	1	Pirin	C-terminal	cupin	domain
Phage_Mu_Gp45	PF06890.7	gi|449068251|ref|YP_007435333.1|	-	0.033	13.6	0.0	0.063	12.7	0.0	1.4	1	0	0	1	1	1	0	Bacteriophage	Mu	Gp45	protein
AMP-binding	PF00501.23	gi|449068252|ref|YP_007435334.1|	-	1.1e-68	231.5	0.0	1.4e-68	231.2	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|449068252|ref|YP_007435334.1|	-	7.7e-16	58.8	0.0	1.4e-15	57.9	0.0	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
Pterin_4a	PF01329.14	gi|449068253|ref|YP_007435335.1|	-	2.5e-30	104.1	0.0	2.6e-30	103.9	0.0	1.0	1	0	0	1	1	1	1	Pterin	4	alpha	carbinolamine	dehydratase
Oxidored_FMN	PF00724.15	gi|449068254|ref|YP_007435336.1|	-	3.7e-64	216.8	0.0	5.2e-64	216.3	0.0	1.2	1	0	0	1	1	1	1	NADH:flavin	oxidoreductase	/	NADH	oxidase	family
Pyr_redox	PF00070.22	gi|449068254|ref|YP_007435336.1|	-	4.1e-09	36.7	0.6	6.4e-08	32.8	0.2	2.6	2	1	0	2	2	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|449068254|ref|YP_007435336.1|	-	5.5e-09	35.9	0.0	1.5e-08	34.5	0.0	1.8	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
DAO	PF01266.19	gi|449068254|ref|YP_007435336.1|	-	1.7e-05	23.9	0.0	8.3e-05	21.6	0.0	1.9	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.9	gi|449068254|ref|YP_007435336.1|	-	0.0006	19.7	0.0	0.0015	18.4	0.0	1.7	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
3HCDH_N	PF02737.13	gi|449068254|ref|YP_007435336.1|	-	0.00085	19.0	0.0	0.0015	18.2	0.0	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Dus	PF01207.12	gi|449068254|ref|YP_007435336.1|	-	0.0009	18.1	0.0	0.71	8.6	0.0	2.7	3	0	0	3	3	3	2	Dihydrouridine	synthase	(Dus)
Thi4	PF01946.12	gi|449068254|ref|YP_007435336.1|	-	0.00095	18.3	0.0	0.0018	17.4	0.0	1.4	1	0	0	1	1	1	1	Thi4	family
HI0933_like	PF03486.9	gi|449068254|ref|YP_007435336.1|	-	0.0017	16.8	0.1	0.02	13.3	0.1	2.0	2	0	0	2	2	2	1	HI0933-like	protein
FAD_binding_3	PF01494.14	gi|449068254|ref|YP_007435336.1|	-	0.0019	17.3	0.2	0.0029	16.7	0.1	1.2	1	0	0	1	1	1	1	FAD	binding	domain
BtpA	PF03437.10	gi|449068254|ref|YP_007435336.1|	-	0.0051	16.0	0.0	0.025	13.8	0.0	2.0	2	0	0	2	2	2	1	BtpA	family
GIDA	PF01134.17	gi|449068254|ref|YP_007435336.1|	-	0.0056	15.5	0.0	0.0086	14.9	0.0	1.2	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
Pyr_redox_3	PF13738.1	gi|449068254|ref|YP_007435336.1|	-	0.013	15.6	0.1	0.12	12.3	0.0	2.2	1	1	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_Gly3P_dh_N	PF01210.18	gi|449068254|ref|YP_007435336.1|	-	0.025	14.2	0.0	0.089	12.5	0.0	2.0	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
UDPG_MGDP_dh_N	PF03721.9	gi|449068254|ref|YP_007435336.1|	-	0.048	13.0	0.0	0.1	11.9	0.0	1.6	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Amino_oxidase	PF01593.19	gi|449068254|ref|YP_007435336.1|	-	0.11	11.5	0.0	0.15	11.1	0.0	1.3	1	0	0	1	1	1	0	Flavin	containing	amine	oxidoreductase
FAD_binding_2	PF00890.19	gi|449068254|ref|YP_007435336.1|	-	0.12	11.1	0.1	0.19	10.5	0.0	1.2	1	0	0	1	1	1	0	FAD	binding	domain
NAD_binding_2	PF03446.10	gi|449068254|ref|YP_007435336.1|	-	0.18	11.6	0.0	0.34	10.7	0.0	1.5	1	0	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Tricorn_PDZ	PF14685.1	gi|449068255|ref|YP_007435337.1|	-	5.5e-23	80.5	0.0	1.5e-22	79.2	0.0	1.8	1	0	0	1	1	1	1	Tricorn	protease	PDZ	domain
Peptidase_S41	PF03572.13	gi|449068255|ref|YP_007435337.1|	-	1.3e-22	80.0	0.0	2.5e-22	79.0	0.0	1.5	1	0	0	1	1	1	1	Peptidase	family	S41
Tricorn_C1	PF14684.1	gi|449068255|ref|YP_007435337.1|	-	9.9e-22	76.5	2.6	9.9e-22	76.5	1.8	2.1	2	0	0	2	2	2	1	Tricorn	protease	C1	domain
PD40	PF07676.7	gi|449068255|ref|YP_007435337.1|	-	3.8e-11	42.4	11.5	0.00016	21.2	0.3	5.6	7	0	0	7	7	7	3	WD40-like	Beta	Propeller	Repeat
DPPIV_N	PF00930.16	gi|449068255|ref|YP_007435337.1|	-	4.6e-05	22.1	0.7	0.11	10.9	0.0	4.2	4	2	1	5	5	5	2	Dipeptidyl	peptidase	IV	(DPP	IV)	N-terminal	region
PDZ_2	PF13180.1	gi|449068255|ref|YP_007435337.1|	-	0.00014	21.6	0.0	0.00051	19.8	0.0	2.0	1	0	0	1	1	1	1	PDZ	domain
DUF1922	PF09082.5	gi|449068255|ref|YP_007435337.1|	-	0.13	12.3	0.1	14	5.8	0.0	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1922)
ABC_tran	PF00005.22	gi|449068256|ref|YP_007435338.1|	-	3.5e-24	85.6	0.1	7.6e-24	84.5	0.0	1.6	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|449068256|ref|YP_007435338.1|	-	7.2e-13	49.1	0.1	3.2e-08	33.8	0.0	2.3	1	1	0	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|449068256|ref|YP_007435338.1|	-	0.00036	19.8	0.4	0.23	10.6	0.0	2.2	1	1	1	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA	PF00004.24	gi|449068256|ref|YP_007435338.1|	-	0.0021	18.2	0.2	0.0073	16.4	0.0	2.0	3	0	0	3	3	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_29	PF13555.1	gi|449068256|ref|YP_007435338.1|	-	0.0051	16.3	0.3	0.0099	15.3	0.2	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.1	gi|449068256|ref|YP_007435338.1|	-	0.0075	15.3	0.0	0.26	10.3	0.0	2.1	1	1	1	2	2	2	1	AAA	ATPase	domain
SbcCD_C	PF13558.1	gi|449068256|ref|YP_007435338.1|	-	0.012	15.4	0.0	0.1	12.4	0.0	2.1	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
DUF258	PF03193.11	gi|449068256|ref|YP_007435338.1|	-	0.014	14.5	0.0	0.025	13.7	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
NB-ARC	PF00931.17	gi|449068256|ref|YP_007435338.1|	-	0.016	14.0	0.1	0.042	12.6	0.0	1.6	2	0	0	2	2	2	0	NB-ARC	domain
AAA_13	PF13166.1	gi|449068256|ref|YP_007435338.1|	-	0.04	12.3	0.1	0.057	11.8	0.1	1.2	1	0	0	1	1	1	0	AAA	domain
NACHT	PF05729.7	gi|449068256|ref|YP_007435338.1|	-	0.062	12.9	0.2	0.28	10.8	0.1	2.0	2	0	0	2	2	2	0	NACHT	domain
Zeta_toxin	PF06414.7	gi|449068256|ref|YP_007435338.1|	-	0.065	12.3	0.0	0.097	11.7	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
DUF87	PF01935.12	gi|449068256|ref|YP_007435338.1|	-	0.077	12.8	1.0	0.26	11.0	0.1	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF87
AAA_22	PF13401.1	gi|449068256|ref|YP_007435338.1|	-	0.089	12.9	0.1	0.26	11.4	0.0	1.9	1	1	1	2	2	2	0	AAA	domain
THF_DHG_CYH_C	PF02882.14	gi|449068257|ref|YP_007435339.1|	-	0.09	11.8	0.0	0.09	11.8	0.0	1.0	1	0	0	1	1	1	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
UPF0547	PF10571.4	gi|449068258|ref|YP_007435340.1|	-	1.6e-06	27.7	6.4	2.4e-06	27.1	4.4	1.3	1	1	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
Elf1	PF05129.8	gi|449068258|ref|YP_007435340.1|	-	0.00044	19.8	1.5	0.00053	19.6	1.0	1.0	1	0	0	1	1	1	1	Transcription	elongation	factor	Elf1	like
RNA_POL_M_15KD	PF02150.11	gi|449068258|ref|YP_007435340.1|	-	0.0017	17.9	0.2	0.0025	17.4	0.1	1.2	1	0	0	1	1	1	1	RNA	polymerases	M/15	Kd	subunit
DUF2387	PF09526.5	gi|449068258|ref|YP_007435340.1|	-	0.0038	17.0	0.5	0.0038	17.0	0.3	1.1	1	0	0	1	1	1	1	Probable	metal-binding	protein	(DUF2387)
DUF329	PF03884.9	gi|449068258|ref|YP_007435340.1|	-	0.0043	16.5	1.4	0.3	10.6	0.2	2.2	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF329)
zinc_ribbon_4	PF13717.1	gi|449068258|ref|YP_007435340.1|	-	0.0065	16.1	3.2	0.02	14.5	2.2	1.8	1	1	0	1	1	1	1	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|449068258|ref|YP_007435340.1|	-	0.0086	15.6	3.6	0.025	14.1	2.5	1.7	1	1	0	1	1	1	1	zinc-ribbon	domain
zf-C4_Topoisom	PF01396.14	gi|449068258|ref|YP_007435340.1|	-	0.016	14.6	2.8	0.14	11.7	0.5	2.1	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
Auto_anti-p27	PF06677.7	gi|449068258|ref|YP_007435340.1|	-	0.017	14.8	3.2	0.46	10.2	0.1	2.1	1	1	1	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zf-C2H2_4	PF13894.1	gi|449068258|ref|YP_007435340.1|	-	0.018	15.3	0.7	2	8.9	0.1	2.3	2	0	0	2	2	2	0	C2H2-type	zinc	finger
zf-ribbon_3	PF13248.1	gi|449068258|ref|YP_007435340.1|	-	0.018	14.2	3.7	0.29	10.4	2.8	2.1	1	1	1	2	2	2	0	zinc-ribbon	domain
DUF2072	PF09845.4	gi|449068258|ref|YP_007435340.1|	-	0.024	14.5	0.5	0.028	14.3	0.4	1.1	1	0	0	1	1	1	0	Zn-ribbon	containing	protein	(DUF2072)
Rubredoxin	PF00301.15	gi|449068258|ref|YP_007435340.1|	-	0.03	14.2	0.9	0.56	10.1	0.0	2.1	2	0	0	2	2	2	0	Rubredoxin
zf-TFIIB	PF13453.1	gi|449068258|ref|YP_007435340.1|	-	0.045	12.9	0.4	0.062	12.5	0.3	1.3	1	0	0	1	1	1	0	Transcription	factor	zinc-finger
Zn-ribbon_8	PF09723.5	gi|449068258|ref|YP_007435340.1|	-	0.057	13.3	2.1	0.11	12.4	1.4	1.4	1	1	0	1	1	1	0	Zinc	ribbon	domain
zf-RING_3	PF14369.1	gi|449068258|ref|YP_007435340.1|	-	0.059	13.3	1.0	0.19	11.7	0.7	1.8	1	1	1	2	2	2	0	zinc-finger
DZR	PF12773.2	gi|449068258|ref|YP_007435340.1|	-	0.062	13.1	1.6	0.12	12.2	1.1	1.4	1	1	0	1	1	1	0	Double	zinc	ribbon
Herpes_glycop_H	PF02489.11	gi|449068258|ref|YP_007435340.1|	-	0.078	10.9	0.5	0.075	11.0	0.3	1.0	1	0	0	1	1	1	0	Herpesvirus	glycoprotein	H
zf-ISL3	PF14690.1	gi|449068258|ref|YP_007435340.1|	-	0.079	12.9	4.6	3	7.9	0.5	2.2	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-H2C2_2	PF13465.1	gi|449068258|ref|YP_007435340.1|	-	0.1	12.9	5.9	1.6	9.1	0.1	2.5	3	0	0	3	3	2	0	Zinc-finger	double	domain
Ogr_Delta	PF04606.7	gi|449068258|ref|YP_007435340.1|	-	0.13	11.9	1.3	3.5	7.3	0.9	2.1	1	1	1	2	2	2	0	Ogr/Delta-like	zinc	finger
zf-LITAF-like	PF10601.4	gi|449068258|ref|YP_007435340.1|	-	0.16	11.8	1.4	4	7.3	0.1	2.1	1	1	1	2	2	2	0	LITAF-like	zinc	ribbon	domain
zf-CHY	PF05495.7	gi|449068258|ref|YP_007435340.1|	-	0.17	12.0	0.8	0.21	11.7	0.6	1.2	1	0	0	1	1	1	0	CHY	zinc	finger
zf-C2H2	PF00096.21	gi|449068258|ref|YP_007435340.1|	-	0.17	12.2	5.2	1.3	9.5	0.3	2.5	2	1	0	2	2	2	0	Zinc	finger,	C2H2	type
eIF-5_eIF-2B	PF01873.12	gi|449068258|ref|YP_007435340.1|	-	0.19	11.3	1.0	0.26	10.9	0.7	1.2	1	0	0	1	1	1	0	Domain	found	in	IF2B/IF5
OrfB_Zn_ribbon	PF07282.6	gi|449068258|ref|YP_007435340.1|	-	0.21	11.2	2.5	0.95	9.1	1.4	1.9	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
IBR	PF01485.16	gi|449068258|ref|YP_007435340.1|	-	0.22	11.4	1.9	0.34	10.8	1.3	1.4	1	1	0	1	1	1	0	IBR	domain
Integrase_Zn	PF02022.14	gi|449068258|ref|YP_007435340.1|	-	0.43	10.0	2.9	5.6	6.5	0.1	2.2	2	0	0	2	2	2	0	Integrase	Zinc	binding	domain
TF_Zn_Ribbon	PF08271.7	gi|449068258|ref|YP_007435340.1|	-	0.45	9.8	4.1	1.1	8.6	2.9	1.7	1	1	0	1	1	1	0	TFIIB	zinc-binding
Zn_Tnp_IS1595	PF12760.2	gi|449068258|ref|YP_007435340.1|	-	0.48	10.2	3.5	3.6	7.4	0.4	2.1	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
CpXC	PF14353.1	gi|449068258|ref|YP_007435340.1|	-	0.5	10.3	2.2	5.3	7.0	0.2	2.0	1	1	1	2	2	2	0	CpXC	protein
zinc_ribbon_2	PF13240.1	gi|449068258|ref|YP_007435340.1|	-	0.56	9.7	6.2	5.8	6.5	4.3	2.1	1	1	0	1	1	1	0	zinc-ribbon	domain
zf-C3HC4_3	PF13920.1	gi|449068258|ref|YP_007435340.1|	-	0.85	9.3	7.3	3.9	7.2	0.9	2.1	1	1	1	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
VP_N-CPKC	PF11475.3	gi|449068258|ref|YP_007435340.1|	-	1.3	8.6	3.1	2.2	7.8	0.4	2.1	2	0	0	2	2	2	0	Virion	protein	N	terminal	domain
ADK_lid	PF05191.9	gi|449068258|ref|YP_007435340.1|	-	1.5	8.5	6.0	1.8	8.2	0.1	2.4	2	1	0	2	2	2	0	Adenylate	kinase,	active	site	lid
zf-C2HC_2	PF13913.1	gi|449068258|ref|YP_007435340.1|	-	2.6	7.8	8.9	6.9	6.4	0.5	2.4	3	0	0	3	3	2	0	zinc-finger	of	a	C2HC-type
TFIIS_C	PF01096.13	gi|449068258|ref|YP_007435340.1|	-	4	7.1	5.7	1.2e+02	2.4	3.9	2.1	1	1	0	1	1	1	0	Transcription	factor	S-II	(TFIIS)
Cys_rich_KTR	PF14205.1	gi|449068258|ref|YP_007435340.1|	-	5.7	6.4	7.6	1.8	8.0	0.7	2.1	1	1	1	2	2	2	0	Cysteine-rich	KTR
zf-RING_5	PF14634.1	gi|449068258|ref|YP_007435340.1|	-	7.2	6.4	6.9	11	5.8	0.3	2.1	1	1	0	2	2	2	0	zinc-RING	finger	domain
ABC2_membrane_2	PF12679.2	gi|449068259|ref|YP_007435341.1|	-	5.5e-16	58.2	29.0	1.7e-15	56.5	20.1	1.7	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|449068259|ref|YP_007435341.1|	-	6.2e-15	54.9	38.0	9.1e-15	54.4	26.3	1.2	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_3	PF12698.2	gi|449068259|ref|YP_007435341.1|	-	3.4e-05	23.0	36.9	3.4e-05	23.0	25.5	1.7	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
DUF4175	PF13779.1	gi|449068259|ref|YP_007435341.1|	-	0.5	8.0	1.9	0.64	7.6	1.3	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4175)
ABC_tran	PF00005.22	gi|449068260|ref|YP_007435342.1|	-	1.9e-27	96.2	0.0	5.9e-27	94.6	0.0	1.7	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|449068260|ref|YP_007435342.1|	-	3.9e-10	40.1	5.8	2.6e-06	27.6	0.1	2.8	1	1	2	3	3	3	2	AAA	domain
UPF0079	PF02367.12	gi|449068260|ref|YP_007435342.1|	-	0.00053	19.6	0.1	0.0012	18.4	0.0	1.5	1	0	0	1	1	1	1	Uncharacterised	P-loop	hydrolase	UPF0079
DUF4162	PF13732.1	gi|449068260|ref|YP_007435342.1|	-	0.0011	19.4	0.8	0.0027	18.1	0.2	2.0	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4162)
AAA_29	PF13555.1	gi|449068260|ref|YP_007435342.1|	-	0.0013	18.2	0.0	0.0032	16.9	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA	PF00004.24	gi|449068260|ref|YP_007435342.1|	-	0.012	15.8	0.3	0.063	13.4	0.2	2.3	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ArgK	PF03308.11	gi|449068260|ref|YP_007435342.1|	-	0.017	13.8	0.0	0.043	12.5	0.0	1.6	1	0	0	1	1	1	0	ArgK	protein
MutS_V	PF00488.16	gi|449068260|ref|YP_007435342.1|	-	0.019	14.4	0.1	0.054	12.9	0.0	1.7	2	0	0	2	2	2	0	MutS	domain	V
AAA_19	PF13245.1	gi|449068260|ref|YP_007435342.1|	-	0.019	14.6	0.2	0.047	13.4	0.2	1.7	1	1	0	1	1	1	0	Part	of	AAA	domain
AAA_16	PF13191.1	gi|449068260|ref|YP_007435342.1|	-	0.023	14.7	0.0	0.041	13.8	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_22	PF13401.1	gi|449068260|ref|YP_007435342.1|	-	0.034	14.2	0.3	0.17	12.0	0.1	2.3	1	1	1	2	2	2	0	AAA	domain
AAA_33	PF13671.1	gi|449068260|ref|YP_007435342.1|	-	0.038	13.8	0.2	0.18	11.6	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
AAA_30	PF13604.1	gi|449068260|ref|YP_007435342.1|	-	0.047	13.2	0.0	0.089	12.3	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_14	PF13173.1	gi|449068260|ref|YP_007435342.1|	-	0.053	13.4	1.2	3.1	7.7	0.0	3.1	1	1	2	4	4	4	0	AAA	domain
AAA_25	PF13481.1	gi|449068260|ref|YP_007435342.1|	-	0.095	12.0	0.1	0.24	10.8	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
SRP54	PF00448.17	gi|449068260|ref|YP_007435342.1|	-	0.096	12.1	0.0	0.15	11.4	0.0	1.4	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
MobB	PF03205.9	gi|449068260|ref|YP_007435342.1|	-	0.13	12.0	1.1	0.42	10.3	0.0	2.3	2	1	1	3	3	3	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NACHT	PF05729.7	gi|449068260|ref|YP_007435342.1|	-	0.14	11.7	0.2	0.45	10.1	0.0	1.8	2	0	0	2	2	2	0	NACHT	domain
NTPase_1	PF03266.10	gi|449068260|ref|YP_007435342.1|	-	0.36	10.5	2.9	1.1	8.9	0.1	2.5	3	0	0	3	3	3	0	NTPase
AAA_23	PF13476.1	gi|449068260|ref|YP_007435342.1|	-	0.58	10.4	9.6	5.1	7.3	6.6	2.1	1	1	0	1	1	1	0	AAA	domain
POR_N	PF01855.14	gi|449068261|ref|YP_007435343.1|	-	7.9e-59	198.9	0.0	1.5e-58	198.0	0.0	1.4	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
POR	PF01558.13	gi|449068261|ref|YP_007435343.1|	-	1.6e-32	112.7	1.0	3.7e-32	111.6	0.3	1.9	2	0	0	2	2	2	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
Transketolase_C	PF02780.15	gi|449068261|ref|YP_007435343.1|	-	1.2e-07	31.6	0.1	5.1e-07	29.6	0.0	2.0	2	0	0	2	2	2	1	Transketolase,	C-terminal	domain
TPP_enzyme_N	PF02776.13	gi|449068261|ref|YP_007435343.1|	-	6.8e-05	22.4	0.5	0.00038	19.9	0.4	2.2	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|449068262|ref|YP_007435344.1|	-	1.8e-31	108.7	0.2	2.9e-31	108.1	0.1	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
PFO_beta_C	PF12367.3	gi|449068262|ref|YP_007435344.1|	-	2e-15	56.4	1.3	2.2e-14	53.1	0.9	2.2	1	1	0	1	1	1	1	Pyruvate	ferredoxin	oxidoreductase	beta	subunit	C	terminal
TBPIP	PF07106.8	gi|449068263|ref|YP_007435345.1|	-	0.0067	15.9	2.1	0.0077	15.7	0.1	1.8	1	1	1	2	2	2	1	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
TrmB	PF01978.14	gi|449068263|ref|YP_007435345.1|	-	0.011	15.4	1.4	0.02	14.5	0.2	1.9	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
ATP-synt_F	PF01990.12	gi|449068263|ref|YP_007435345.1|	-	0.078	13.3	1.2	0.56	10.6	0.8	2.1	1	1	0	1	1	1	0	ATP	synthase	(F/14-kDa)	subunit
z-alpha	PF02295.12	gi|449068263|ref|YP_007435345.1|	-	0.12	12.1	0.3	0.22	11.2	0.2	1.5	1	0	0	1	1	1	0	Adenosine	deaminase	z-alpha	domain
RPA_C	PF08784.6	gi|449068263|ref|YP_007435345.1|	-	0.13	12.6	0.0	0.2	12.0	0.0	1.4	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
DinI	PF06183.8	gi|449068263|ref|YP_007435345.1|	-	3.3	7.7	5.5	1.6	8.8	0.6	2.4	1	1	1	2	2	2	0	DinI-like	family
RmlD_sub_bind	PF04321.12	gi|449068265|ref|YP_007435347.1|	-	4.3e-24	84.8	0.0	5.4e-24	84.5	0.0	1.0	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Epimerase	PF01370.16	gi|449068265|ref|YP_007435347.1|	-	3.6e-07	29.8	0.0	6.3e-07	29.0	0.0	1.4	2	0	0	2	2	2	1	NAD	dependent	epimerase/dehydratase	family
Nol1_Nop2_Fmu	PF01189.12	gi|449068267|ref|YP_007435349.1|	-	3.3e-30	105.4	0.5	8.3e-30	104.1	0.4	1.6	1	1	0	1	1	1	1	NOL1/NOP2/sun	family
Methyltransf_31	PF13847.1	gi|449068267|ref|YP_007435349.1|	-	1.3e-05	24.8	0.2	3.4e-05	23.4	0.0	1.7	2	0	0	2	2	2	1	Methyltransferase	domain
MTS	PF05175.9	gi|449068267|ref|YP_007435349.1|	-	0.022	14.1	0.0	0.03	13.6	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	small	domain
Sigma_reg_C	PF13791.1	gi|449068267|ref|YP_007435349.1|	-	0.025	14.6	2.0	0.05	13.6	1.4	1.4	1	0	0	1	1	1	0	Sigma	factor	regulator	C-terminal
DUF3486	PF11985.3	gi|449068267|ref|YP_007435349.1|	-	0.12	12.3	0.4	0.2	11.6	0.3	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3486)
HxlR	PF01638.12	gi|449068268|ref|YP_007435350.1|	-	1.6e-18	66.0	0.1	2e-18	65.7	0.0	1.1	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_5	PF01022.15	gi|449068268|ref|YP_007435350.1|	-	8e-06	25.4	0.0	1.1e-05	25.0	0.0	1.2	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_45	PF14947.1	gi|449068268|ref|YP_007435350.1|	-	0.00019	21.1	0.2	0.00026	20.7	0.2	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_27	PF13463.1	gi|449068268|ref|YP_007435350.1|	-	0.00028	21.1	0.0	0.00041	20.6	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_34	PF13601.1	gi|449068268|ref|YP_007435350.1|	-	0.00064	19.6	0.0	0.00081	19.3	0.0	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
RepL	PF05732.6	gi|449068268|ref|YP_007435350.1|	-	0.00076	18.7	0.2	0.0011	18.1	0.1	1.4	1	1	0	1	1	1	1	Firmicute	plasmid	replication	protein	(RepL)
PadR	PF03551.9	gi|449068268|ref|YP_007435350.1|	-	0.0053	16.5	0.1	0.0071	16.0	0.1	1.3	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_24	PF13412.1	gi|449068268|ref|YP_007435350.1|	-	0.0061	15.9	0.1	0.0091	15.3	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
Sulfolobus_pRN	PF05584.6	gi|449068268|ref|YP_007435350.1|	-	0.013	15.4	0.1	0.02	14.8	0.0	1.4	1	0	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
HTH_20	PF12840.2	gi|449068268|ref|YP_007435350.1|	-	0.013	15.2	0.0	0.019	14.7	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
RPA_C	PF08784.6	gi|449068268|ref|YP_007435350.1|	-	0.019	15.3	0.0	0.028	14.8	0.0	1.5	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
MarR_2	PF12802.2	gi|449068268|ref|YP_007435350.1|	-	0.021	14.5	0.0	0.028	14.0	0.0	1.2	1	0	0	1	1	1	0	MarR	family
MarR	PF01047.17	gi|449068268|ref|YP_007435350.1|	-	0.032	13.9	0.0	0.046	13.4	0.0	1.2	1	0	0	1	1	1	0	MarR	family
HTH_43	PF09904.4	gi|449068268|ref|YP_007435350.1|	-	0.064	13.0	0.0	0.083	12.7	0.0	1.2	1	0	0	1	1	1	0	Winged	helix-turn	helix
HGTP_anticodon	PF03129.15	gi|449068268|ref|YP_007435350.1|	-	0.085	12.8	0.1	0.12	12.3	0.1	1.3	1	0	0	1	1	1	0	Anticodon	binding	domain
Lum_binding	PF00677.12	gi|449068269|ref|YP_007435351.1|	-	0.0042	16.9	1.8	0.0042	16.9	1.3	1.6	2	0	0	2	2	2	1	Lumazine	binding	domain
DUF3040	PF11239.3	gi|449068269|ref|YP_007435351.1|	-	0.012	15.6	1.1	0.021	14.8	0.8	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3040)
DUF3360	PF11840.3	gi|449068269|ref|YP_007435351.1|	-	0.069	11.4	2.2	0.072	11.4	1.5	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3360)
ATP1G1_PLM_MAT8	PF02038.11	gi|449068269|ref|YP_007435351.1|	-	0.07	12.1	5.2	0.27	10.2	0.5	2.4	1	1	1	2	2	2	0	ATP1G1/PLM/MAT8	family
PKD	PF00801.15	gi|449068269|ref|YP_007435351.1|	-	0.21	11.3	2.9	3.6	7.4	0.5	2.4	2	0	0	2	2	2	0	PKD	domain
IncA	PF04156.9	gi|449068269|ref|YP_007435351.1|	-	3.7	7.1	7.6	5.4	6.5	5.3	1.3	1	0	0	1	1	1	0	IncA	protein
DUF1628	PF07790.6	gi|449068269|ref|YP_007435351.1|	-	9.9	6.9	9.2	25	5.6	6.4	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1628)
2TM	PF13239.1	gi|449068270|ref|YP_007435352.1|	-	0.0039	17.2	2.2	0.0089	16.0	1.5	1.5	1	0	0	1	1	1	1	2TM	domain
SpoVIF	PF14069.1	gi|449068270|ref|YP_007435352.1|	-	0.022	14.4	0.0	0.061	13.0	0.0	1.7	1	0	0	1	1	1	0	Stage	VI	sporulation	protein	F
DUF3211	PF11485.3	gi|449068270|ref|YP_007435352.1|	-	0.029	14.4	3.6	0.032	14.2	0.2	2.6	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3211)
IncA	PF04156.9	gi|449068270|ref|YP_007435352.1|	-	2.4	7.7	9.5	1	8.9	4.9	1.6	2	0	0	2	2	2	0	IncA	protein
T2SE	PF00437.15	gi|449068271|ref|YP_007435353.1|	-	1.2e-45	155.5	0.0	2.1e-45	154.7	0.0	1.3	1	1	0	1	1	1	1	Type	II/IV	secretion	system	protein
ABC_tran	PF00005.22	gi|449068271|ref|YP_007435353.1|	-	0.0008	19.7	0.0	0.0017	18.6	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
AAA_17	PF13207.1	gi|449068271|ref|YP_007435353.1|	-	0.0013	19.5	0.1	0.012	16.4	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
PCMT	PF01135.14	gi|449068271|ref|YP_007435353.1|	-	0.0025	17.3	0.1	0.073	12.5	0.0	2.3	2	0	0	2	2	2	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
AAA_29	PF13555.1	gi|449068271|ref|YP_007435353.1|	-	0.0044	16.5	0.1	0.01	15.3	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
TrwB_AAD_bind	PF10412.4	gi|449068271|ref|YP_007435353.1|	-	0.0055	15.3	0.1	0.0082	14.8	0.1	1.2	1	0	0	1	1	1	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
MobB	PF03205.9	gi|449068271|ref|YP_007435353.1|	-	0.01	15.5	0.1	0.02	14.5	0.1	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
MMR_HSR1	PF01926.18	gi|449068271|ref|YP_007435353.1|	-	0.013	15.4	0.0	0.026	14.4	0.0	1.6	1	0	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_18	PF13238.1	gi|449068271|ref|YP_007435353.1|	-	0.014	15.6	0.1	0.051	13.8	0.0	2.0	2	0	0	2	2	1	0	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|449068271|ref|YP_007435353.1|	-	0.018	14.5	0.1	0.044	13.2	0.0	1.6	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
cobW	PF02492.14	gi|449068271|ref|YP_007435353.1|	-	0.026	13.9	0.1	0.041	13.3	0.0	1.3	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_22	PF13401.1	gi|449068271|ref|YP_007435353.1|	-	0.027	14.6	0.0	0.11	12.6	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
Miro	PF08477.8	gi|449068271|ref|YP_007435353.1|	-	0.043	14.3	0.0	0.2	12.1	0.0	2.1	2	0	0	2	2	2	0	Miro-like	protein
Septin	PF00735.13	gi|449068271|ref|YP_007435353.1|	-	0.049	12.6	0.1	0.081	11.9	0.0	1.3	1	0	0	1	1	1	0	Septin
Dynamin_N	PF00350.18	gi|449068271|ref|YP_007435353.1|	-	0.055	13.2	0.1	0.12	12.2	0.1	1.5	1	0	0	1	1	1	0	Dynamin	family
AAA_16	PF13191.1	gi|449068271|ref|YP_007435353.1|	-	0.057	13.4	0.0	0.11	12.5	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
DUF87	PF01935.12	gi|449068271|ref|YP_007435353.1|	-	0.057	13.2	0.2	0.14	11.9	0.1	1.7	2	0	0	2	2	1	0	Domain	of	unknown	function	DUF87
SRP54	PF00448.17	gi|449068271|ref|YP_007435353.1|	-	0.076	12.4	0.4	0.14	11.5	0.2	1.4	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
DUF258	PF03193.11	gi|449068271|ref|YP_007435353.1|	-	0.088	11.9	0.0	0.16	11.1	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_28	PF13521.1	gi|449068271|ref|YP_007435353.1|	-	0.1	12.5	0.0	0.17	11.8	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|449068271|ref|YP_007435353.1|	-	0.15	11.5	0.1	0.25	10.7	0.0	1.4	1	0	0	1	1	1	0	AAA-like	domain
AAA_19	PF13245.1	gi|449068271|ref|YP_007435353.1|	-	0.16	11.7	0.0	0.43	10.3	0.0	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
Zeta_toxin	PF06414.7	gi|449068271|ref|YP_007435353.1|	-	0.16	11.0	0.0	0.29	10.2	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
AAA_30	PF13604.1	gi|449068271|ref|YP_007435353.1|	-	0.16	11.4	0.1	0.27	10.7	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
AAA_23	PF13476.1	gi|449068271|ref|YP_007435353.1|	-	0.24	11.6	1.0	0.43	10.8	0.1	1.8	2	0	0	2	2	1	0	AAA	domain
T2SF	PF00482.18	gi|449068272|ref|YP_007435354.1|	-	1.7e-10	40.8	4.8	1.7e-06	27.9	0.6	5.0	6	0	0	6	6	6	2	Type	II	secretion	system	(T2SS),	protein	F
DUF4407	PF14362.1	gi|449068272|ref|YP_007435354.1|	-	0.0022	17.0	0.3	0.0022	17.0	0.2	2.0	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4407)
Anemone_cytotox	PF06369.7	gi|449068272|ref|YP_007435354.1|	-	0.094	12.1	0.0	0.22	10.9	0.0	1.5	2	0	0	2	2	2	0	Sea	anemone	cytotoxic	protein
Chordopox_L2	PF05803.7	gi|449068273|ref|YP_007435355.1|	-	0.03	13.9	2.5	0.039	13.5	1.7	1.1	1	0	0	1	1	1	0	Chordopoxvirus	L2	protein
Glu_synthase	PF01645.12	gi|449068274|ref|YP_007435356.1|	-	6.1e-95	318.2	3.4	1.6e-91	306.9	0.9	2.1	2	0	0	2	2	2	2	Conserved	region	in	glutamate	synthase
Glu_syn_central	PF04898.9	gi|449068274|ref|YP_007435356.1|	-	8.7e-09	35.0	0.0	1.4e-05	24.4	0.0	3.1	3	0	0	3	3	3	1	Glutamate	synthase	central	domain
FMN_dh	PF01070.13	gi|449068274|ref|YP_007435356.1|	-	3.7e-08	32.6	10.8	6.5e-06	25.2	3.7	3.2	3	0	0	3	3	3	2	FMN-dependent	dehydrogenase
NMO	PF03060.10	gi|449068274|ref|YP_007435356.1|	-	0.021	13.9	9.7	0.075	12.1	5.9	2.0	1	1	1	2	2	2	0	Nitronate	monooxygenase
NanE	PF04131.9	gi|449068274|ref|YP_007435356.1|	-	0.034	13.1	0.3	0.072	12.0	0.2	1.5	1	0	0	1	1	1	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
DHO_dh	PF01180.16	gi|449068274|ref|YP_007435356.1|	-	0.053	12.4	2.6	0.12	11.3	1.8	1.6	1	1	0	1	1	1	0	Dihydroorotate	dehydrogenase
PcrB	PF01884.12	gi|449068274|ref|YP_007435356.1|	-	0.12	11.6	3.9	0.89	8.7	0.6	2.6	2	1	1	3	3	3	0	PcrB	family
IMPDH	PF00478.20	gi|449068274|ref|YP_007435356.1|	-	0.5	9.1	9.1	0.27	10.0	4.7	1.7	2	0	0	2	2	2	0	IMP	dehydrogenase	/	GMP	reductase	domain
GXGXG	PF01493.14	gi|449068275|ref|YP_007435357.1|	-	1.2e-26	92.9	12.2	9.6e-26	90.0	8.4	2.2	1	1	0	1	1	1	1	GXGXG	motif
GATase_6	PF13522.1	gi|449068275|ref|YP_007435357.1|	-	2.4e-16	59.9	0.0	5.7e-16	58.6	0.0	1.6	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_2	PF00310.16	gi|449068275|ref|YP_007435357.1|	-	2.3e-14	52.8	0.0	8.9e-14	50.9	0.0	1.9	1	1	0	1	1	1	1	Glutamine	amidotransferases	class-II
GATase_7	PF13537.1	gi|449068275|ref|YP_007435357.1|	-	2.5e-07	30.4	0.0	6.6e-07	29.1	0.0	1.8	1	1	0	1	1	1	1	Glutamine	amidotransferase	domain
DUF3091	PF11291.3	gi|449068275|ref|YP_007435357.1|	-	0.075	12.9	1.5	13	5.8	0.1	2.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3091)
CbiG_N	PF11760.3	gi|449068276|ref|YP_007435358.1|	-	1.2e-05	24.9	0.0	2.2e-05	24.0	0.0	1.4	1	0	0	1	1	1	1	Cobalamin	synthesis	G	N-terminal
CbiG_mid	PF11761.3	gi|449068276|ref|YP_007435358.1|	-	0.0099	16.0	0.0	0.021	15.0	0.0	1.6	1	0	0	1	1	1	1	Cobalamin	biosynthesis	central	region
Peripla_BP_2	PF01497.13	gi|449068277|ref|YP_007435359.1|	-	6.8e-15	54.8	0.0	8.5e-15	54.5	0.0	1.1	1	0	0	1	1	1	1	Periplasmic	binding	protein
NIR_SIR	PF01077.17	gi|449068277|ref|YP_007435359.1|	-	0.098	12.0	0.0	0.2	11.0	0.0	1.5	1	0	0	1	1	1	0	Nitrite	and	sulphite	reductase	4Fe-4S	domain
Haemagg_act	PF05860.8	gi|449068278|ref|YP_007435360.1|	-	0.024	14.4	2.5	0.041	13.6	1.7	1.4	1	0	0	1	1	1	0	haemagglutination	activity	domain
HMGL-like	PF00682.14	gi|449068279|ref|YP_007435361.1|	-	5.8e-44	150.5	0.0	9.2e-44	149.8	0.0	1.3	1	0	0	1	1	1	1	HMGL-like
LeuA_dimer	PF08502.5	gi|449068279|ref|YP_007435361.1|	-	2.6e-22	79.0	1.1	2.7e-21	75.7	0.1	2.5	2	0	0	2	2	2	1	LeuA	allosteric	(dimerisation)	domain
PEP_mutase	PF13714.1	gi|449068279|ref|YP_007435361.1|	-	0.04	13.1	0.0	0.074	12.2	0.0	1.3	1	0	0	1	1	1	0	Phosphoenolpyruvate	phosphomutase
NTP_transf_2	PF01909.18	gi|449068279|ref|YP_007435361.1|	-	0.078	13.3	0.6	0.57	10.5	0.4	2.5	1	1	0	1	1	1	0	Nucleotidyltransferase	domain
UbiA	PF01040.13	gi|449068280|ref|YP_007435362.1|	-	1.4e-30	106.3	24.8	1.9e-30	105.9	17.2	1.2	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
DUF2752	PF10825.3	gi|449068280|ref|YP_007435362.1|	-	0.26	11.3	2.3	2.4	8.2	0.0	3.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2752)
AIG2	PF06094.7	gi|449068281|ref|YP_007435363.1|	-	1e-22	80.5	5.5	1.2e-17	64.2	0.7	2.2	2	0	0	2	2	2	2	AIG2-like	family
AIG2_2	PF13772.1	gi|449068281|ref|YP_007435363.1|	-	9.9e-11	41.6	1.9	1e-05	25.5	0.0	2.3	2	0	0	2	2	2	2	AIG2-like	family
NfeD	PF01957.13	gi|449068283|ref|YP_007435365.1|	-	3.3e-18	66.2	0.2	5e-18	65.6	0.2	1.2	1	0	0	1	1	1	1	NfeD-like	C-terminal,	partner-binding
FUSC-like	PF12805.2	gi|449068283|ref|YP_007435365.1|	-	0.037	12.9	0.7	0.047	12.6	0.5	1.1	1	0	0	1	1	1	0	FUSC-like	inner	membrane	protein	yccS
Thermopsin	PF05317.6	gi|449068284|ref|YP_007435366.1|	-	1.3e-48	165.2	13.9	1.3e-48	165.2	9.6	1.9	2	1	1	3	3	3	1	Thermopsin
Band_7	PF01145.20	gi|449068285|ref|YP_007435367.1|	-	1.2e-34	119.7	4.8	1.6e-34	119.3	3.3	1.1	1	0	0	1	1	1	1	SPFH	domain	/	Band	7	family
Band_7_1	PF13421.1	gi|449068285|ref|YP_007435367.1|	-	0.022	14.2	0.6	0.17	11.3	0.3	2.1	1	1	0	2	2	2	0	SPFH	domain-Band	7	family
Arch_ATPase	PF01637.13	gi|449068286|ref|YP_007435368.1|	-	1.2e-29	103.6	2.9	1.2e-29	103.6	2.0	2.3	2	2	0	2	2	2	1	Archaeal	ATPase
DUF234	PF03008.9	gi|449068286|ref|YP_007435368.1|	-	2.1e-19	69.4	2.9	1.8e-18	66.5	2.1	2.5	2	0	0	2	2	2	1	Archaea	bacterial	proteins	of	unknown	function
AAA_14	PF13173.1	gi|449068286|ref|YP_007435368.1|	-	1.4e-08	34.6	2.1	1.5e-08	34.6	0.2	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|449068286|ref|YP_007435368.1|	-	0.00027	20.9	0.0	0.0005	20.1	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|449068286|ref|YP_007435368.1|	-	0.0046	17.1	0.1	0.1	12.7	0.1	2.6	1	1	0	1	1	1	1	AAA	domain
DUF4143	PF13635.1	gi|449068286|ref|YP_007435368.1|	-	0.047	13.8	0.4	0.047	13.8	0.3	2.7	3	1	0	3	3	3	0	Domain	of	unknown	function	(DUF4143)
ThiI	PF02568.9	gi|449068287|ref|YP_007435369.1|	-	3.5e-46	157.1	0.0	5.6e-46	156.4	0.0	1.3	1	0	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
THUMP	PF02926.12	gi|449068287|ref|YP_007435369.1|	-	1.4e-15	57.4	0.7	1.4e-15	57.4	0.5	1.8	2	0	0	2	2	2	1	THUMP	domain
QueC	PF06508.8	gi|449068287|ref|YP_007435369.1|	-	4.7e-06	26.0	0.0	0.0016	17.8	0.0	2.5	2	1	0	2	2	2	2	Queuosine	biosynthesis	protein	QueC
ATP_bind_4	PF01902.12	gi|449068287|ref|YP_007435369.1|	-	0.033	13.5	0.0	0.26	10.6	0.0	2.2	2	0	0	2	2	2	0	ATP-binding	region
NAD_binding_5	PF07994.7	gi|449068288|ref|YP_007435370.1|	-	3.9e-41	141.4	0.0	1.6e-40	139.4	0.0	1.9	1	1	0	1	1	1	1	Myo-inositol-1-phosphate	synthase
Inos-1-P_synth	PF01658.12	gi|449068288|ref|YP_007435370.1|	-	8.1e-22	77.1	0.1	1.9e-21	76.0	0.0	1.7	2	0	0	2	2	2	1	Myo-inositol-1-phosphate	synthase
GFO_IDH_MocA	PF01408.17	gi|449068288|ref|YP_007435370.1|	-	0.015	15.7	0.1	0.14	12.7	0.1	2.2	1	1	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
Oxidored_q1	PF00361.15	gi|449068289|ref|YP_007435371.1|	-	2.8e-40	138.3	34.9	2.8e-40	138.3	24.2	2.2	2	0	0	2	2	2	1	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
Oxidored_q1	PF00361.15	gi|449068290|ref|YP_007435372.1|	-	8.2e-80	267.9	69.6	2.8e-46	157.9	22.2	6.5	6	1	0	6	6	6	3	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
Oxidored_q1_N	PF00662.15	gi|449068290|ref|YP_007435372.1|	-	1.6e-05	24.3	16.9	0.002	17.6	1.7	4.4	3	1	1	4	4	4	2	NADH-Ubiquinone	oxidoreductase	(complex	I),	chain	5	N-terminus
Oxidored_q2	PF00420.19	gi|449068291|ref|YP_007435373.1|	-	1.4e-10	40.6	9.0	1.5e-10	40.4	6.2	1.0	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
TspO_MBR	PF03073.10	gi|449068291|ref|YP_007435373.1|	-	0.0043	16.5	5.0	0.0061	16.0	3.5	1.3	1	1	0	1	1	1	1	TspO/MBR	family
BaxI_1	PF12811.2	gi|449068291|ref|YP_007435373.1|	-	0.12	11.5	7.3	0.24	10.5	5.0	1.5	1	1	0	1	1	1	0	Bax	inhibitor	1	like
Oxidored_q3	PF00499.15	gi|449068292|ref|YP_007435374.1|	-	7.5e-11	41.9	19.1	1.1e-10	41.4	13.2	1.3	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	6
DUF4040	PF13244.1	gi|449068292|ref|YP_007435374.1|	-	0.024	14.6	2.8	0.024	14.6	1.9	3.3	3	1	1	4	4	4	0	Domain	of	unknown	function	(DUF4040)
7TMR-DISM_7TM	PF07695.6	gi|449068292|ref|YP_007435374.1|	-	6.1	6.4	29.7	35	3.9	20.6	2.1	1	1	0	1	1	1	0	7TM	diverse	intracellular	signalling
Fer4	PF00037.22	gi|449068293|ref|YP_007435375.1|	-	6.7e-15	53.9	13.5	3.1e-09	36.0	2.6	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|449068293|ref|YP_007435375.1|	-	2.3e-12	46.5	19.3	7.9e-09	35.2	6.9	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|449068293|ref|YP_007435375.1|	-	3.3e-11	42.7	15.6	9.1e-09	34.9	5.8	1.6	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|449068293|ref|YP_007435375.1|	-	8.1e-11	41.2	12.6	1.4e-05	24.7	2.0	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|449068293|ref|YP_007435375.1|	-	1.2e-10	41.6	9.6	2.1e-10	40.8	6.6	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|449068293|ref|YP_007435375.1|	-	8.7e-09	36.0	3.0	0.0018	19.0	0.0	2.5	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_9	PF13187.1	gi|449068293|ref|YP_007435375.1|	-	1.5e-08	34.7	8.4	2.9e-08	33.8	5.8	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|449068293|ref|YP_007435375.1|	-	2e-07	30.4	13.6	0.00029	20.5	1.8	2.7	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|449068293|ref|YP_007435375.1|	-	4.9e-07	30.0	0.4	0.018	15.3	0.0	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|449068293|ref|YP_007435375.1|	-	3.5e-06	26.9	16.3	0.00013	21.9	6.0	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|449068293|ref|YP_007435375.1|	-	1.1e-05	25.3	10.5	0.0086	16.3	1.4	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|449068293|ref|YP_007435375.1|	-	6e-05	23.3	18.3	0.0065	16.9	3.6	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|449068293|ref|YP_007435375.1|	-	0.0029	18.1	11.3	0.03	14.8	1.0	2.4	1	1	1	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.1	gi|449068293|ref|YP_007435375.1|	-	0.0053	17.1	14.6	0.18	12.2	2.9	2.4	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|449068293|ref|YP_007435375.1|	-	0.074	13.4	10.0	0.45	10.9	1.7	2.6	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_11	PF13247.1	gi|449068293|ref|YP_007435375.1|	-	0.14	12.0	2.8	3.6	7.5	2.3	1.8	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
NADHdh	PF00146.16	gi|449068294|ref|YP_007435376.1|	-	2.5e-51	174.5	27.7	4e-36	124.6	10.2	2.0	1	1	1	2	2	2	2	NADH	dehydrogenase
Complex1_49kDa	PF00346.14	gi|449068295|ref|YP_007435377.1|	-	2.2e-64	217.1	0.0	2.7e-64	216.8	0.0	1.1	1	0	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase,	49	Kd	subunit
NiFeSe_Hases	PF00374.14	gi|449068295|ref|YP_007435377.1|	-	0.026	13.2	0.0	0.049	12.3	0.0	1.3	1	0	0	1	1	1	0	Nickel-dependent	hydrogenase
Complex1_30kDa	PF00329.14	gi|449068296|ref|YP_007435378.1|	-	1.3e-31	108.9	0.1	1.6e-31	108.5	0.1	1.1	1	0	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase,	30	Kd	subunit
Oxidored_q4	PF00507.14	gi|449068297|ref|YP_007435379.1|	-	1.2e-05	25.0	3.8	1.7e-05	24.5	2.6	1.3	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase,	chain	3
YqhR	PF11085.3	gi|449068297|ref|YP_007435379.1|	-	0.01	15.3	3.1	0.014	14.9	2.1	1.2	1	0	0	1	1	1	0	Conserved	membrane	protein	YqhR
VKOR	PF07884.9	gi|449068297|ref|YP_007435379.1|	-	0.37	10.6	5.7	0.57	10.0	4.0	1.3	1	1	0	1	1	1	0	Vitamin	K	epoxide	reductase	family
Thy1	PF02511.10	gi|449068298|ref|YP_007435380.1|	-	6e-64	214.9	0.4	7.4e-64	214.6	0.3	1.1	1	0	0	1	1	1	1	Thymidylate	synthase	complementing	protein
DUF2175	PF09943.4	gi|449068299|ref|YP_007435381.1|	-	3.4e-38	129.7	2.8	3.8e-38	129.6	2.0	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2175)
Vps39_2	PF10367.4	gi|449068299|ref|YP_007435381.1|	-	0.00089	19.4	1.0	0.0055	16.8	0.0	2.1	2	0	0	2	2	2	1	Vacuolar	sorting	protein	39	domain	2
DUF2410	PF10307.4	gi|449068299|ref|YP_007435381.1|	-	0.0039	16.5	0.6	0.0044	16.4	0.4	1.1	1	0	0	1	1	1	1	Hypothetical	protein	(DUF2410)
GFA	PF04828.9	gi|449068299|ref|YP_007435381.1|	-	0.029	14.2	0.2	0.047	13.6	0.1	1.5	1	1	0	1	1	1	0	Glutathione-dependent	formaldehyde-activating	enzyme
SRPRB	PF09439.5	gi|449068299|ref|YP_007435381.1|	-	0.03	13.5	0.7	0.037	13.2	0.5	1.3	1	0	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
DUF1825	PF08855.5	gi|449068299|ref|YP_007435381.1|	-	0.031	14.2	1.0	0.039	13.9	0.7	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1825)
FliG_N	PF14842.1	gi|449068299|ref|YP_007435381.1|	-	0.036	14.1	1.0	0.058	13.5	0.7	1.4	1	1	0	1	1	1	0	FliG	N-terminal	domain
DUF3231	PF11553.3	gi|449068299|ref|YP_007435381.1|	-	0.049	13.1	0.4	0.08	12.4	0.2	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3231)
C5-epim_C	PF06662.8	gi|449068300|ref|YP_007435382.1|	-	0.0001	21.6	0.9	0.027	13.7	0.1	2.6	1	1	1	2	2	2	2	D-glucuronyl	C5-epimerase	C-terminus
Glyco_hydro_76	PF03663.9	gi|449068300|ref|YP_007435382.1|	-	0.053	12.9	0.1	0.053	12.9	0.1	2.2	3	1	0	3	3	3	0	Glycosyl	hydrolase	family	76
DUF364	PF04016.7	gi|449068301|ref|YP_007435383.1|	-	1.3e-28	99.1	0.0	1.9e-28	98.6	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF364)
DUF4213	PF13938.1	gi|449068301|ref|YP_007435383.1|	-	5.8e-18	64.8	0.0	9.3e-18	64.1	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4213)
PadR	PF03551.9	gi|449068302|ref|YP_007435384.1|	-	4.4e-17	61.6	0.1	7.3e-17	60.9	0.1	1.4	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_27	PF13463.1	gi|449068302|ref|YP_007435384.1|	-	0.0034	17.6	0.0	0.012	15.9	0.0	1.9	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
Taeniidae_ag	PF05596.6	gi|449068302|ref|YP_007435384.1|	-	0.0044	16.8	0.5	0.0095	15.7	0.3	1.7	1	1	0	1	1	1	1	Taeniidae	antigen
TrmB	PF01978.14	gi|449068302|ref|YP_007435384.1|	-	0.0052	16.4	0.1	0.018	14.7	0.0	2.1	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
DUF1495	PF07381.6	gi|449068302|ref|YP_007435384.1|	-	0.0073	15.9	0.6	0.022	14.3	0.2	2.0	2	1	0	2	2	2	1	Winged	helix	DNA-binding	domain	(DUF1495)
DUF3116	PF11313.3	gi|449068302|ref|YP_007435384.1|	-	0.021	14.4	0.1	0.051	13.1	0.0	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3116)
HTH_45	PF14947.1	gi|449068302|ref|YP_007435384.1|	-	0.025	14.3	0.3	0.081	12.7	0.0	1.9	2	0	0	2	2	2	0	Winged	helix-turn-helix
HTH_34	PF13601.1	gi|449068302|ref|YP_007435384.1|	-	0.027	14.5	0.1	0.079	12.9	0.1	1.9	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
DUF4364	PF14277.1	gi|449068302|ref|YP_007435384.1|	-	0.03	13.9	0.2	0.072	12.6	0.0	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4364)
ALS2CR8	PF15299.1	gi|449068302|ref|YP_007435384.1|	-	0.049	13.2	0.0	0.084	12.4	0.0	1.4	1	0	0	1	1	1	0	Amyotrophic	lateral	sclerosis	2	chromosomal	region	candidate	gene	8
HTH_5	PF01022.15	gi|449068302|ref|YP_007435384.1|	-	0.11	12.1	0.7	0.62	9.7	0.1	2.5	3	0	0	3	3	3	0	Bacterial	regulatory	protein,	arsR	family
DUF2862	PF11061.3	gi|449068302|ref|YP_007435384.1|	-	0.14	11.9	1.7	0.36	10.5	0.1	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2862)
Aldolase_2	PF10120.4	gi|449068303|ref|YP_007435385.1|	-	4.8e-60	201.7	0.0	5.5e-60	201.6	0.0	1.0	1	0	0	1	1	1	1	Putative	aldolase
CarboxypepD_reg	PF13620.1	gi|449068304|ref|YP_007435386.1|	-	4.8e-09	36.1	9.2	4.8e-09	36.1	6.4	3.4	3	1	0	3	3	2	1	Carboxypeptidase	regulatory-like	domain
Big_1	PF02369.11	gi|449068304|ref|YP_007435386.1|	-	9.5e-09	35.0	29.0	6.2e-07	29.2	8.0	4.2	3	1	0	3	3	3	2	Bacterial	Ig-like	domain	(group	1)
ATG16	PF08614.6	gi|449068304|ref|YP_007435386.1|	-	1e-07	31.9	7.8	1.6e-07	31.3	5.4	1.2	1	0	0	1	1	1	1	Autophagy	protein	16	(ATG16)
Baculo_PEP_C	PF04513.7	gi|449068304|ref|YP_007435386.1|	-	1.1e-07	31.8	25.6	1.1e-07	31.8	17.7	2.0	2	1	0	2	2	1	1	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Reo_sigmaC	PF04582.7	gi|449068304|ref|YP_007435386.1|	-	3.3e-07	29.8	17.9	3.3e-07	29.8	12.4	1.7	2	0	0	2	2	1	1	Reovirus	sigma	C	capsid	protein
TMF_DNA_bd	PF12329.3	gi|449068304|ref|YP_007435386.1|	-	2.7e-06	27.0	10.6	0.0079	15.9	0.9	2.3	1	1	1	2	2	2	2	TATA	element	modulatory	factor	1	DNA	binding
DUF4480	PF13715.1	gi|449068304|ref|YP_007435386.1|	-	2.9e-06	27.2	1.4	2.9e-06	27.2	1.0	2.9	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4480)
TBPIP	PF07106.8	gi|449068304|ref|YP_007435386.1|	-	4.9e-06	26.1	7.4	0.00031	20.3	0.2	2.2	1	1	1	2	2	2	2	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
Spc7	PF08317.6	gi|449068304|ref|YP_007435386.1|	-	5e-06	25.4	5.9	7.6e-06	24.8	4.1	1.2	1	0	0	1	1	1	1	Spc7	kinetochore	protein
AAA_13	PF13166.1	gi|449068304|ref|YP_007435386.1|	-	5.2e-06	25.2	2.3	8.9e-06	24.4	1.6	1.3	1	0	0	1	1	1	1	AAA	domain
Atg14	PF10186.4	gi|449068304|ref|YP_007435386.1|	-	1.3e-05	24.3	1.7	1.8e-05	23.8	1.2	1.2	1	0	0	1	1	1	1	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
DUF1664	PF07889.7	gi|449068304|ref|YP_007435386.1|	-	1.3e-05	25.0	3.8	0.013	15.3	0.1	2.4	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF1664)
CENP-F_leu_zip	PF10473.4	gi|449068304|ref|YP_007435386.1|	-	2e-05	24.4	4.2	3.6e-05	23.6	2.9	1.3	1	0	0	1	1	1	1	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Prefoldin_2	PF01920.15	gi|449068304|ref|YP_007435386.1|	-	2.5e-05	23.9	0.7	0.042	13.6	0.3	2.5	1	1	1	2	2	2	1	Prefoldin	subunit
FlaC_arch	PF05377.6	gi|449068304|ref|YP_007435386.1|	-	2.8e-05	23.9	6.7	0.0026	17.5	1.3	3.0	1	1	2	3	3	3	1	Flagella	accessory	protein	C	(FlaC)
MG1	PF11974.3	gi|449068304|ref|YP_007435386.1|	-	5.4e-05	23.6	2.7	5.4e-05	23.6	1.9	2.9	2	1	1	3	3	2	1	Alpha-2-macroglobulin	MG1	domain
Lzipper-MIP1	PF14389.1	gi|449068304|ref|YP_007435386.1|	-	6.1e-05	23.0	3.6	0.022	14.8	0.5	2.5	1	1	1	2	2	2	1	Leucine-zipper	of	ternary	complex	factor	MIP1
Myosin_tail_1	PF01576.14	gi|449068304|ref|YP_007435386.1|	-	6.5e-05	20.8	2.5	8.6e-05	20.4	1.7	1.0	1	0	0	1	1	1	1	Myosin	tail
XhlA	PF10779.4	gi|449068304|ref|YP_007435386.1|	-	7.1e-05	22.6	1.6	0.27	11.1	0.0	2.4	1	1	1	2	2	2	2	Haemolysin	XhlA
BLOC1_2	PF10046.4	gi|449068304|ref|YP_007435386.1|	-	8.1e-05	22.6	8.2	0.017	15.2	0.1	2.4	1	1	1	2	2	2	2	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
TPR_MLP1_2	PF07926.7	gi|449068304|ref|YP_007435386.1|	-	8.3e-05	22.3	5.8	0.00033	20.4	4.0	1.9	1	1	0	1	1	1	1	TPR/MLP1/MLP2-like	protein
IncA	PF04156.9	gi|449068304|ref|YP_007435386.1|	-	9e-05	22.1	8.7	9e-05	22.1	6.0	3.0	1	1	0	2	2	1	1	IncA	protein
DUF869	PF05911.6	gi|449068304|ref|YP_007435386.1|	-	0.00011	20.6	3.0	0.00014	20.2	2.1	1.1	1	0	0	1	1	1	1	Plant	protein	of	unknown	function	(DUF869)
SlyX	PF04102.7	gi|449068304|ref|YP_007435386.1|	-	0.00018	21.7	3.3	0.0095	16.2	0.1	2.5	1	1	2	3	3	3	2	SlyX
ADIP	PF11559.3	gi|449068304|ref|YP_007435386.1|	-	0.0002	21.3	11.5	0.0083	16.0	7.8	2.1	1	1	0	1	1	1	1	Afadin-	and	alpha	-actinin-Binding
GAS	PF13851.1	gi|449068304|ref|YP_007435386.1|	-	0.0002	20.6	1.4	0.00035	19.8	0.9	1.3	1	0	0	1	1	1	1	Growth-arrest	specific	micro-tubule	binding
CALCOCO1	PF07888.6	gi|449068304|ref|YP_007435386.1|	-	0.00021	19.7	3.1	0.00031	19.1	2.2	1.1	1	0	0	1	1	1	1	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
NPV_P10	PF05531.7	gi|449068304|ref|YP_007435386.1|	-	0.00021	21.4	13.0	0.02	15.1	0.7	2.5	1	1	1	2	2	2	2	Nucleopolyhedrovirus	P10	protein
Filament	PF00038.16	gi|449068304|ref|YP_007435386.1|	-	0.00025	20.6	1.7	0.00039	20.0	1.2	1.2	1	0	0	1	1	1	1	Intermediate	filament	protein
DUF3450	PF11932.3	gi|449068304|ref|YP_007435386.1|	-	0.00026	20.3	6.6	0.01	15.0	3.5	2.2	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF3450)
Cna_B	PF05738.8	gi|449068304|ref|YP_007435386.1|	-	0.00026	20.6	2.1	0.00026	20.6	1.5	2.7	2	0	0	2	2	2	1	Cna	protein	B-type	domain
DUF342	PF03961.8	gi|449068304|ref|YP_007435386.1|	-	0.00027	19.4	1.1	0.00042	18.8	0.8	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF342)
MscS_porin	PF12795.2	gi|449068304|ref|YP_007435386.1|	-	0.0003	20.1	24.0	0.006	15.9	7.5	2.2	1	1	1	2	2	2	2	Mechanosensitive	ion	channel	porin	domain
Prefoldin	PF02996.12	gi|449068304|ref|YP_007435386.1|	-	0.00032	20.3	4.9	0.098	12.3	0.5	3.2	1	1	2	3	3	3	2	Prefoldin	subunit
A2M_N	PF01835.14	gi|449068304|ref|YP_007435386.1|	-	0.0004	20.5	6.4	0.0018	18.5	0.2	3.6	4	0	0	4	4	3	1	MG2	domain
WEMBL	PF05701.6	gi|449068304|ref|YP_007435386.1|	-	0.00051	18.6	3.4	0.00069	18.1	2.4	1.1	1	0	0	1	1	1	1	Weak	chloroplast	movement	under	blue	light
DUF2730	PF10805.3	gi|449068304|ref|YP_007435386.1|	-	0.0007	19.3	2.4	0.07	12.8	0.5	2.5	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF2730)
HOOK	PF05622.7	gi|449068304|ref|YP_007435386.1|	-	0.00079	17.3	1.1	0.0011	16.9	0.8	1.1	1	0	0	1	1	1	1	HOOK	protein
CCDC155	PF14662.1	gi|449068304|ref|YP_007435386.1|	-	0.0008	19.0	2.5	0.0013	18.3	1.7	1.2	1	0	0	1	1	1	1	Coiled-coil	region	of	CCDC155
APG6	PF04111.7	gi|449068304|ref|YP_007435386.1|	-	0.00082	18.5	3.0	0.0013	17.9	2.1	1.2	1	0	0	1	1	1	1	Autophagy	protein	Apg6
EMP24_GP25L	PF01105.19	gi|449068304|ref|YP_007435386.1|	-	0.00083	19.1	9.9	0.061	13.0	2.1	3.9	1	1	2	3	3	3	1	emp24/gp25L/p24	family/GOLD
Nup54	PF13874.1	gi|449068304|ref|YP_007435386.1|	-	0.00096	18.8	6.4	0.0016	18.0	4.4	1.3	1	0	0	1	1	1	1	Nucleoporin	complex	subunit	54
Seryl_tRNA_N	PF02403.17	gi|449068304|ref|YP_007435386.1|	-	0.00099	19.0	2.7	0.0018	18.2	1.8	1.4	1	0	0	1	1	1	1	Seryl-tRNA	synthetase	N-terminal	domain
Fib_alpha	PF08702.5	gi|449068304|ref|YP_007435386.1|	-	0.0011	19.0	12.7	0.026	14.6	5.5	2.2	1	1	1	2	2	2	1	Fibrinogen	alpha/beta	chain	family
V_ATPase_I	PF01496.14	gi|449068304|ref|YP_007435386.1|	-	0.0012	16.8	0.1	0.0019	16.1	0.1	1.3	1	0	0	1	1	1	1	V-type	ATPase	116kDa	subunit	family
Tropomyosin_1	PF12718.2	gi|449068304|ref|YP_007435386.1|	-	0.0013	18.6	1.8	0.018	14.9	1.3	2.0	1	1	0	1	1	1	1	Tropomyosin	like
IFT57	PF10498.4	gi|449068304|ref|YP_007435386.1|	-	0.0013	17.5	5.5	0.0019	16.9	3.8	1.1	1	0	0	1	1	1	1	Intra-flagellar	transport	protein	57
HAUS-augmin3	PF14932.1	gi|449068304|ref|YP_007435386.1|	-	0.0022	17.2	8.5	0.0036	16.5	5.9	1.2	1	0	0	1	1	1	1	HAUS	augmin-like	complex	subunit	3
Snapin_Pallidin	PF14712.1	gi|449068304|ref|YP_007435386.1|	-	0.0026	18.0	3.2	0.0026	18.0	2.2	2.4	1	1	1	2	2	2	1	Snapin/Pallidin
Cast	PF10174.4	gi|449068304|ref|YP_007435386.1|	-	0.0027	15.8	0.8	0.0077	14.3	0.6	1.5	1	1	0	1	1	1	1	RIM-binding	protein	of	the	cytomatrix	active	zone
CENP-Q	PF13094.1	gi|449068304|ref|YP_007435386.1|	-	0.0027	17.7	3.1	0.0075	16.3	2.1	1.7	1	1	0	1	1	1	1	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
DUF4198	PF10670.4	gi|449068304|ref|YP_007435386.1|	-	0.0028	17.7	1.0	0.036	14.0	0.2	2.4	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4198)
FliJ	PF02050.11	gi|449068304|ref|YP_007435386.1|	-	0.0028	17.7	4.9	0.097	12.7	0.1	2.2	1	1	1	2	2	2	1	Flagellar	FliJ	protein
AAA_27	PF13514.1	gi|449068304|ref|YP_007435386.1|	-	0.0038	15.0	0.6	0.0055	14.4	0.4	1.2	1	0	0	1	1	1	1	AAA	domain
DivIC	PF04977.10	gi|449068304|ref|YP_007435386.1|	-	0.0039	16.6	6.0	3.3	7.2	0.0	3.4	1	1	2	3	3	3	0	Septum	formation	initiator
DUF812	PF05667.6	gi|449068304|ref|YP_007435386.1|	-	0.0041	15.7	5.5	0.017	13.6	3.9	1.8	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF812)
DUF904	PF06005.7	gi|449068304|ref|YP_007435386.1|	-	0.0044	17.2	8.0	0.28	11.4	5.6	2.3	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF904)
DivIVA	PF05103.8	gi|449068304|ref|YP_007435386.1|	-	0.0051	16.8	1.3	0.035	14.1	0.4	2.1	1	1	1	2	2	2	1	DivIVA	protein
Laminin_II	PF06009.7	gi|449068304|ref|YP_007435386.1|	-	0.0054	16.5	9.7	0.014	15.1	6.7	1.7	1	1	0	1	1	1	1	Laminin	Domain	II
Laminin_I	PF06008.9	gi|449068304|ref|YP_007435386.1|	-	0.0057	15.9	9.6	0.11	11.8	2.7	2.0	1	1	1	2	2	2	2	Laminin	Domain	I
DUF2968	PF11180.3	gi|449068304|ref|YP_007435386.1|	-	0.0059	16.0	1.5	0.018	14.4	0.8	1.9	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF2968)
Med9	PF07544.8	gi|449068304|ref|YP_007435386.1|	-	0.0063	16.2	0.5	0.026	14.2	0.2	2.0	1	1	0	1	1	1	1	RNA	polymerase	II	transcription	mediator	complex	subunit	9
Bacillus_HBL	PF05791.6	gi|449068304|ref|YP_007435386.1|	-	0.0065	15.8	11.0	0.17	11.2	4.5	2.1	1	1	1	2	2	2	1	Bacillus	haemolytic	enterotoxin	(HBL)
Spc24	PF08286.6	gi|449068304|ref|YP_007435386.1|	-	0.0073	15.9	8.4	0.62	9.7	2.5	2.9	1	1	1	2	2	2	1	Spc24	subunit	of	Ndc80
PspA_IM30	PF04012.7	gi|449068304|ref|YP_007435386.1|	-	0.0073	15.6	1.5	0.18	11.1	0.5	2.0	1	1	1	2	2	2	1	PspA/IM30	family
DUF972	PF06156.8	gi|449068304|ref|YP_007435386.1|	-	0.0082	16.4	3.3	0.12	12.7	0.7	2.3	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF972)
TMF_TATA_bd	PF12325.3	gi|449068304|ref|YP_007435386.1|	-	0.0086	15.8	5.8	0.38	10.5	1.7	2.4	1	1	1	2	2	2	1	TATA	element	modulatory	factor	1	TATA	binding
BicD	PF09730.4	gi|449068304|ref|YP_007435386.1|	-	0.0096	14.3	3.8	0.013	13.8	2.7	1.1	1	0	0	1	1	1	1	Microtubule-associated	protein	Bicaudal-D
DUF3584	PF12128.3	gi|449068304|ref|YP_007435386.1|	-	0.01	13.2	2.3	0.014	12.7	1.6	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
V-SNARE	PF05008.10	gi|449068304|ref|YP_007435386.1|	-	0.011	15.8	2.0	0.022	14.9	1.4	1.5	1	0	0	1	1	1	0	Vesicle	transport	v-SNARE	protein	N-terminus
DUF4164	PF13747.1	gi|449068304|ref|YP_007435386.1|	-	0.012	15.7	0.7	0.021	14.9	0.5	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4164)
DUF1206	PF06724.6	gi|449068304|ref|YP_007435386.1|	-	0.016	14.9	0.2	0.12	12.0	0.1	2.6	1	0	0	1	1	1	0	Domain	of	Unknown	Function	(DUF1206)
Mnd1	PF03962.10	gi|449068304|ref|YP_007435386.1|	-	0.02	14.5	0.6	0.032	13.8	0.4	1.3	1	0	0	1	1	1	0	Mnd1	family
Surfac_D-trimer	PF09006.6	gi|449068304|ref|YP_007435386.1|	-	0.02	14.6	2.2	17	5.2	0.0	3.9	3	1	1	4	4	4	0	Lung	surfactant	protein	D	coiled-coil	trimerisation
FliD_C	PF07195.7	gi|449068304|ref|YP_007435386.1|	-	0.021	14.1	16.7	0.053	12.8	5.6	2.7	1	1	1	2	2	2	0	Flagellar	hook-associated	protein	2	C-terminus
Uds1	PF15456.1	gi|449068304|ref|YP_007435386.1|	-	0.022	14.7	2.9	0.063	13.2	2.0	1.9	1	1	0	1	1	1	0	Up-regulated	During	Septation
DUF2205	PF10224.4	gi|449068304|ref|YP_007435386.1|	-	0.023	14.2	2.1	0.085	12.4	0.3	2.4	1	1	1	2	2	2	0	Predicted	coiled-coil	protein	(DUF2205)
DUF4200	PF13863.1	gi|449068304|ref|YP_007435386.1|	-	0.024	14.5	1.3	3	7.8	0.4	2.5	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4200)
Macoilin	PF09726.4	gi|449068304|ref|YP_007435386.1|	-	0.026	12.8	7.7	0.05	11.8	5.4	1.4	1	1	0	1	1	1	0	Transmembrane	protein
Ax_dynein_light	PF10211.4	gi|449068304|ref|YP_007435386.1|	-	0.031	14.1	1.1	0.19	11.5	0.5	2.0	1	1	1	2	2	2	0	Axonemal	dynein	light	chain
COG5	PF10392.4	gi|449068304|ref|YP_007435386.1|	-	0.031	14.2	13.5	0.12	12.2	9.3	1.9	1	1	0	1	1	1	0	Golgi	transport	complex	subunit	5
Vps51	PF08700.6	gi|449068304|ref|YP_007435386.1|	-	0.033	14.0	9.6	2.1	8.2	1.5	3.5	1	1	2	3	3	3	0	Vps51/Vps67
DUF948	PF06103.6	gi|449068304|ref|YP_007435386.1|	-	0.035	13.9	0.3	0.035	13.9	0.2	3.6	2	1	1	3	3	2	0	Bacterial	protein	of	unknown	function	(DUF948)
Fmp27_WPPW	PF10359.4	gi|449068304|ref|YP_007435386.1|	-	0.036	12.4	3.8	0.061	11.7	0.5	2.0	1	1	1	2	2	2	0	RNA	pol	II	promoter	Fmp27	protein	domain
RasGAP_C	PF03836.10	gi|449068304|ref|YP_007435386.1|	-	0.041	13.5	4.0	0.71	9.5	1.0	2.2	1	1	1	2	2	2	0	RasGAP	C-terminus
WXG100	PF06013.7	gi|449068304|ref|YP_007435386.1|	-	0.043	13.8	5.0	2.2	8.3	0.2	3.2	1	1	1	3	3	3	0	Proteins	of	100	residues	with	WXG
Cep57_MT_bd	PF06657.8	gi|449068304|ref|YP_007435386.1|	-	0.049	13.5	1.5	3.9	7.4	0.1	2.3	1	1	1	2	2	2	0	Centrosome	microtubule-binding	domain	of	Cep57
Nsp1_C	PF05064.8	gi|449068304|ref|YP_007435386.1|	-	0.053	13.1	6.4	0.22	11.1	4.2	1.9	1	1	1	2	2	2	0	Nsp1-like	C-terminal	region
DUF2976	PF11190.3	gi|449068304|ref|YP_007435386.1|	-	0.053	13.0	3.0	2.4	7.7	0.0	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2976)
DegS	PF05384.6	gi|449068304|ref|YP_007435386.1|	-	0.056	12.6	0.3	0.089	12.0	0.2	1.3	1	0	0	1	1	1	0	Sensor	protein	DegS
DUF641	PF04859.7	gi|449068304|ref|YP_007435386.1|	-	0.063	13.0	1.7	1.3	8.7	0.6	2.2	1	1	1	2	2	2	0	Plant	protein	of	unknown	function	(DUF641)
MAD	PF05557.8	gi|449068304|ref|YP_007435386.1|	-	0.087	10.9	6.0	0.25	9.3	3.9	1.5	1	1	0	1	1	1	0	Mitotic	checkpoint	protein
GLE1	PF07817.8	gi|449068304|ref|YP_007435386.1|	-	0.091	11.6	6.6	1.4	7.7	2.0	2.4	1	1	1	2	2	2	0	GLE1-like	protein
DUF16	PF01519.11	gi|449068304|ref|YP_007435386.1|	-	0.092	12.9	2.9	0.18	12.0	1.1	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	DUF16
DUF4201	PF13870.1	gi|449068304|ref|YP_007435386.1|	-	0.096	12.1	1.5	0.35	10.2	0.6	1.7	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4201)
Herpes_UL6	PF01763.11	gi|449068304|ref|YP_007435386.1|	-	0.1	10.7	7.2	0.15	10.2	5.0	1.2	1	0	0	1	1	1	0	Herpesvirus	UL6	like
MbeD_MobD	PF04899.7	gi|449068304|ref|YP_007435386.1|	-	0.11	12.4	12.1	1.5	8.7	0.4	3.4	1	1	2	3	3	3	0	MbeD/MobD	like
Mitofilin	PF09731.4	gi|449068304|ref|YP_007435386.1|	-	0.12	10.9	8.9	0.22	10.1	6.0	1.4	1	1	0	1	1	1	0	Mitochondrial	inner	membrane	protein
COG2	PF06148.6	gi|449068304|ref|YP_007435386.1|	-	0.12	12.2	8.1	2.9	7.7	0.3	2.4	1	1	1	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
Mod_r	PF07200.8	gi|449068304|ref|YP_007435386.1|	-	0.12	12.2	5.7	0.21	11.4	4.0	1.3	1	0	0	1	1	1	0	Modifier	of	rudimentary	(Mod(r))	protein
bZIP_1	PF00170.16	gi|449068304|ref|YP_007435386.1|	-	0.13	12.2	3.1	2.8	7.9	0.4	2.6	1	1	2	3	3	3	0	bZIP	transcription	factor
DUF4618	PF15397.1	gi|449068304|ref|YP_007435386.1|	-	0.13	11.5	5.9	0.86	8.8	4.0	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4618)
ALIX_LYPXL_bnd	PF13949.1	gi|449068304|ref|YP_007435386.1|	-	0.15	11.0	6.0	0.25	10.2	4.2	1.3	1	0	0	1	1	1	0	ALIX	V-shaped	domain	binding	to	HIV
Tektin	PF03148.9	gi|449068304|ref|YP_007435386.1|	-	0.19	10.2	4.6	0.74	8.2	1.5	2.0	1	1	0	1	1	1	0	Tektin	family
DASH_Dam1	PF08653.5	gi|449068304|ref|YP_007435386.1|	-	0.21	11.3	5.9	8	6.3	0.4	3.1	1	1	2	3	3	3	0	DASH	complex	subunit	Dam1
BRE1	PF08647.6	gi|449068304|ref|YP_007435386.1|	-	0.22	11.5	5.2	0.22	11.5	1.9	1.7	1	1	1	2	2	2	0	BRE1	E3	ubiquitin	ligase
SF-assemblin	PF06705.6	gi|449068304|ref|YP_007435386.1|	-	0.23	10.5	5.9	0.62	9.1	4.1	1.6	1	1	0	1	1	1	0	SF-assemblin/beta	giardin
Phage_GP20	PF06810.6	gi|449068304|ref|YP_007435386.1|	-	0.24	10.8	3.6	5.2	6.4	0.9	2.2	1	1	1	2	2	2	0	Phage	minor	structural	protein	GP20
Med4	PF10018.4	gi|449068304|ref|YP_007435386.1|	-	0.24	10.7	6.0	3	7.1	4.2	2.1	1	1	0	1	1	1	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
RmuC	PF02646.11	gi|449068304|ref|YP_007435386.1|	-	0.33	9.7	7.0	0.69	8.7	2.4	2.1	1	1	1	2	2	2	0	RmuC	family
Syntaxin	PF00804.20	gi|449068304|ref|YP_007435386.1|	-	0.38	10.9	9.3	5.1	7.3	6.5	2.2	1	1	0	1	1	1	0	Syntaxin
NTR2	PF15458.1	gi|449068304|ref|YP_007435386.1|	-	0.54	9.4	7.9	28	3.8	5.5	2.1	1	1	0	1	1	1	0	Nineteen	complex-related	protein	2
Vps5	PF09325.5	gi|449068304|ref|YP_007435386.1|	-	0.59	9.3	6.7	1.4	8.1	4.6	1.5	1	1	0	1	1	1	0	Vps5	C	terminal	like
Cluap1	PF10234.4	gi|449068304|ref|YP_007435386.1|	-	0.61	9.2	6.9	1.5	7.9	4.8	1.5	1	1	0	1	1	1	0	Clusterin-associated	protein-1
DUF4140	PF13600.1	gi|449068304|ref|YP_007435386.1|	-	0.63	10.5	7.8	0.83	10.1	0.5	3.5	3	1	1	4	4	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
DUF3244	PF11589.3	gi|449068304|ref|YP_007435386.1|	-	0.65	9.7	5.9	0.45	10.2	0.0	3.3	3	1	1	4	4	2	0	Domain	of	unknown	function	(DUF3244)
DUF1319	PF07028.6	gi|449068304|ref|YP_007435386.1|	-	0.71	10.0	8.8	2.5	8.3	2.8	2.7	2	1	1	3	3	2	0	Protein	of	unknown	function	(DUF1319)
Syntaxin-6_N	PF09177.6	gi|449068304|ref|YP_007435386.1|	-	0.78	10.1	6.4	10	6.5	4.2	2.3	1	1	0	1	1	1	0	Syntaxin	6,	N-terminal
Rootletin	PF15035.1	gi|449068304|ref|YP_007435386.1|	-	0.82	9.6	5.6	1.4	8.8	3.8	1.2	1	0	0	1	1	1	0	Ciliary	rootlet	component,	centrosome	cohesion
A2M_N_2	PF07703.9	gi|449068304|ref|YP_007435386.1|	-	0.98	9.2	11.1	0.24	11.1	4.7	2.2	2	2	0	2	2	1	0	Alpha-2-macroglobulin	family	N-terminal	region
HR1	PF02185.11	gi|449068304|ref|YP_007435386.1|	-	1.4	8.7	14.1	2.5	7.8	2.4	2.9	1	1	2	3	3	3	0	Hr1	repeat
FlgD_ig	PF13860.1	gi|449068304|ref|YP_007435386.1|	-	1.4	8.7	9.1	0.33	10.7	0.2	3.9	3	1	1	4	4	2	0	FlgD	Ig-like	domain
FimP	PF09766.4	gi|449068304|ref|YP_007435386.1|	-	1.8	7.5	7.0	4	6.4	0.9	2.2	1	1	1	2	2	2	0	Fms-interacting	protein
Vps52	PF04129.7	gi|449068304|ref|YP_007435386.1|	-	1.9	6.9	9.8	3.8	5.9	6.8	1.5	1	1	0	1	1	1	0	Vps52	/	Sac2	family
Cep57_CLD_2	PF14197.1	gi|449068304|ref|YP_007435386.1|	-	1.9	8.4	5.5	16	5.4	2.8	2.6	1	1	0	1	1	1	0	Centrosome	localisation	domain	of	PPC89
Cortex-I_coil	PF09304.5	gi|449068304|ref|YP_007435386.1|	-	2.2	8.3	5.9	1.5	8.9	1.2	2.1	1	1	1	2	2	2	0	Cortexillin	I,	coiled	coil
CorA	PF01544.13	gi|449068304|ref|YP_007435386.1|	-	2.3	7.1	8.6	0.2	10.6	2.6	1.8	1	1	1	2	2	1	0	CorA-like	Mg2+	transporter	protein
Filo_VP35	PF02097.10	gi|449068304|ref|YP_007435386.1|	-	2.3	7.3	8.2	3.9	6.5	5.3	1.7	1	1	1	2	2	2	0	Filoviridae	VP35
CCDC144C	PF14915.1	gi|449068304|ref|YP_007435386.1|	-	2.7	6.8	11.7	98	1.7	8.1	2.1	1	1	0	1	1	1	0	CCDC144C	protein	coiled-coil	region
H-kinase_dim	PF02895.9	gi|449068304|ref|YP_007435386.1|	-	2.8	8.3	9.3	6.4e+02	0.7	6.5	2.7	1	1	0	1	1	1	0	Signal	transducing	histidine	kinase,	homodimeric	domain
Syntaxin_2	PF14523.1	gi|449068304|ref|YP_007435386.1|	-	3	7.9	15.6	13	5.8	10.2	2.3	1	1	1	2	2	2	0	Syntaxin-like	protein
HsbA	PF12296.3	gi|449068304|ref|YP_007435386.1|	-	3.2	7.6	22.3	0.52	10.1	3.6	3.7	2	2	2	4	4	2	0	Hydrophobic	surface	binding	protein	A
YlbD_coat	PF14071.1	gi|449068304|ref|YP_007435386.1|	-	4.4	7.3	10.7	14	5.7	4.0	2.6	1	1	1	2	2	2	0	Putative	coat	protein
Med10	PF09748.4	gi|449068304|ref|YP_007435386.1|	-	7.6	6.3	12.2	13	5.5	5.8	2.9	1	1	1	2	2	2	0	Transcription	factor	subunit	Med10	of	Mediator	complex
PaREP1	PF05942.6	gi|449068307|ref|YP_007435389.1|	-	3.9e-29	100.8	2.6	4.8e-29	100.5	1.8	1.0	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
TPR_11	PF13414.1	gi|449068307|ref|YP_007435389.1|	-	0.034	13.7	0.2	0.071	12.7	0.1	1.5	1	0	0	1	1	1	0	TPR	repeat
DUF1792	PF08759.6	gi|449068307|ref|YP_007435389.1|	-	0.075	12.6	0.2	0.2	11.2	0.0	1.5	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF1792)
HTH_3	PF01381.17	gi|449068308|ref|YP_007435390.1|	-	5e-09	35.8	0.0	1.1e-08	34.7	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.2	gi|449068308|ref|YP_007435390.1|	-	1.2e-06	28.4	0.0	2.5e-06	27.4	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_31	PF13560.1	gi|449068308|ref|YP_007435390.1|	-	1.4e-05	25.1	0.0	2.3e-05	24.5	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
NUMOD1	PF07453.8	gi|449068308|ref|YP_007435390.1|	-	0.017	14.9	0.0	0.042	13.7	0.0	1.7	1	0	0	1	1	1	0	NUMOD1	domain
HTH_37	PF13744.1	gi|449068308|ref|YP_007435390.1|	-	0.12	12.1	0.0	0.25	11.1	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
NAC	PF01849.13	gi|449068309|ref|YP_007435391.1|	-	4.3e-12	45.3	0.6	4.3e-12	45.3	0.4	2.1	3	0	0	3	3	3	1	NAC	domain
UBA	PF00627.26	gi|449068309|ref|YP_007435391.1|	-	3.7e-05	23.4	0.6	6.9e-05	22.5	0.1	1.7	2	0	0	2	2	2	1	UBA/TS-N	domain
DUF603	PF04645.7	gi|449068309|ref|YP_007435391.1|	-	0.018	15.0	1.1	0.025	14.5	0.6	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function,	DUF603
UBA_4	PF14555.1	gi|449068309|ref|YP_007435391.1|	-	0.049	13.1	0.0	0.079	12.4	0.0	1.3	1	0	0	1	1	1	0	UBA-like	domain
CUE	PF02845.11	gi|449068309|ref|YP_007435391.1|	-	0.074	12.5	0.0	0.19	11.2	0.0	1.7	1	1	1	2	2	2	0	CUE	domain
Beta-Casp	PF10996.3	gi|449068310|ref|YP_007435392.1|	-	1.2e-23	83.3	0.0	3.5e-23	81.9	0.0	1.8	2	0	0	2	2	2	1	Beta-Casp	domain
Lactamase_B_2	PF12706.2	gi|449068310|ref|YP_007435392.1|	-	7.8e-14	51.6	0.0	1.5e-13	50.7	0.0	1.4	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
RMMBL	PF07521.7	gi|449068310|ref|YP_007435392.1|	-	3e-12	46.1	0.0	5.9e-12	45.2	0.0	1.5	1	0	0	1	1	1	1	RNA-metabolising	metallo-beta-lactamase
Lactamase_B	PF00753.22	gi|449068310|ref|YP_007435392.1|	-	4.8e-12	45.9	0.1	2.2e-11	43.7	0.0	2.1	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
PDEase_II	PF02112.10	gi|449068310|ref|YP_007435392.1|	-	4.6e-05	22.4	0.1	0.00011	21.2	0.0	1.6	1	1	0	1	1	1	1	cAMP	phosphodiesterases	class-II
Lactamase_B_3	PF13483.1	gi|449068310|ref|YP_007435392.1|	-	0.0004	20.1	0.0	0.00071	19.3	0.0	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
DUF223	PF02721.9	gi|449068310|ref|YP_007435392.1|	-	0.1	12.6	0.1	0.21	11.6	0.1	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF223
tRNA-Thr_ED	PF08915.6	gi|449068311|ref|YP_007435393.1|	-	1.2e-51	174.2	0.1	2e-51	173.5	0.1	1.4	1	0	0	1	1	1	1	Archaea-specific	editing	domain	of	threonyl-tRNA	synthetase
HGTP_anticodon	PF03129.15	gi|449068311|ref|YP_007435393.1|	-	5.6e-16	58.2	0.2	1.4e-15	56.9	0.2	1.7	1	0	0	1	1	1	1	Anticodon	binding	domain
SIS	PF01380.17	gi|449068312|ref|YP_007435394.1|	-	8.6e-46	154.7	2.0	1.4e-25	89.3	0.1	2.4	2	0	0	2	2	2	2	SIS	domain
GATase_6	PF13522.1	gi|449068312|ref|YP_007435394.1|	-	1.7e-23	83.0	0.0	3.7e-23	81.9	0.0	1.6	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_2	PF00310.16	gi|449068312|ref|YP_007435394.1|	-	2.3e-23	82.4	0.1	9.9e-16	57.3	0.0	2.8	2	1	1	3	3	3	2	Glutamine	amidotransferases	class-II
GATase_7	PF13537.1	gi|449068312|ref|YP_007435394.1|	-	2.3e-20	72.5	0.0	9.1e-20	70.6	0.0	2.1	2	0	0	2	2	2	1	Glutamine	amidotransferase	domain
SIS_2	PF13580.1	gi|449068312|ref|YP_007435394.1|	-	1.9e-08	34.1	0.1	4.5e-05	23.1	0.0	3.4	2	1	1	3	3	3	1	SIS	domain
GATase_4	PF13230.1	gi|449068312|ref|YP_007435394.1|	-	5e-06	25.4	0.0	8.2e-06	24.6	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
Transport_MerF	PF11431.3	gi|449068312|ref|YP_007435394.1|	-	0.088	12.4	0.1	0.18	11.5	0.0	1.4	1	0	0	1	1	1	0	Membrane	transport	protein	MerF
GHMP_kinases_N	PF00288.21	gi|449068313|ref|YP_007435395.1|	-	1e-10	41.4	0.1	2.5e-10	40.2	0.0	1.7	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|449068313|ref|YP_007435395.1|	-	3e-10	40.1	0.1	8.3e-10	38.7	0.1	1.8	2	0	0	2	2	2	1	GHMP	kinases	C	terminal
DUF4468	PF14730.1	gi|449068313|ref|YP_007435395.1|	-	0.072	12.7	0.1	0.23	11.1	0.1	1.8	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4468)	with	TBP-like	fold
NTP_transferase	PF00483.18	gi|449068314|ref|YP_007435396.1|	-	7.3e-16	58.2	0.3	1.1e-14	54.3	0.2	2.1	1	1	0	1	1	1	1	Nucleotidyl	transferase
Hexapep	PF00132.19	gi|449068314|ref|YP_007435396.1|	-	1.5e-15	55.8	15.5	3.2e-08	32.7	0.4	4.9	2	1	3	5	5	5	4	Bacterial	transferase	hexapeptide	(six	repeats)
NTP_transf_3	PF12804.2	gi|449068314|ref|YP_007435396.1|	-	2.4e-13	50.4	0.0	4.7e-13	49.5	0.0	1.6	1	1	0	1	1	1	1	MobA-like	NTP	transferase	domain
Fucokinase	PF07959.7	gi|449068314|ref|YP_007435396.1|	-	0.0016	17.1	2.6	0.0044	15.6	0.4	2.1	1	1	1	2	2	2	1	L-fucokinase
Glycos_transf_2	PF00535.21	gi|449068314|ref|YP_007435396.1|	-	0.0063	16.2	0.1	0.0098	15.5	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Hexapep_2	PF14602.1	gi|449068314|ref|YP_007435396.1|	-	0.014	14.9	6.6	2.2	7.9	0.2	3.7	2	1	1	3	3	3	0	Hexapeptide	repeat	of	succinyl-transferase
CofC	PF01983.11	gi|449068314|ref|YP_007435396.1|	-	0.032	13.1	2.7	0.059	12.3	0.2	2.1	2	0	0	2	2	2	0	Guanylyl	transferase	CofC	like
Semialdhyde_dh	PF01118.19	gi|449068317|ref|YP_007435399.1|	-	5.6e-31	107.3	0.0	6.1e-30	104.0	0.0	2.4	2	1	1	3	3	3	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Semialdhyde_dhC	PF02774.13	gi|449068317|ref|YP_007435399.1|	-	1.2e-22	80.7	0.1	1.7e-22	80.1	0.0	1.2	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
Gp_dh_C	PF02800.15	gi|449068317|ref|YP_007435399.1|	-	0.021	14.2	0.0	0.1	12.0	0.0	2.0	2	0	0	2	2	2	0	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
Methyltransf_11	PF08241.7	gi|449068318|ref|YP_007435400.1|	-	2.9e-16	59.7	0.0	1.9e-15	57.1	0.0	2.1	3	0	0	3	3	2	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|449068318|ref|YP_007435400.1|	-	2e-14	53.4	0.2	4e-14	52.4	0.2	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|449068318|ref|YP_007435400.1|	-	9.3e-14	51.4	0.0	1.4e-13	50.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|449068318|ref|YP_007435400.1|	-	2.7e-13	50.1	0.0	5.3e-13	49.2	0.0	1.5	2	0	0	2	2	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|449068318|ref|YP_007435400.1|	-	2.2e-12	47.5	0.0	4.6e-12	46.4	0.0	1.5	2	0	0	2	2	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|449068318|ref|YP_007435400.1|	-	7.5e-11	42.3	0.0	1.4e-10	41.4	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|449068318|ref|YP_007435400.1|	-	2.4e-09	36.6	0.0	4.1e-09	35.9	0.0	1.3	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
TehB	PF03848.9	gi|449068318|ref|YP_007435400.1|	-	1.1e-06	27.9	0.1	1.8e-06	27.2	0.1	1.3	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
MTS	PF05175.9	gi|449068318|ref|YP_007435400.1|	-	4.1e-06	26.2	0.0	7e-06	25.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_26	PF13659.1	gi|449068318|ref|YP_007435400.1|	-	1.2e-05	25.2	0.0	2.1e-05	24.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
CheR	PF01739.13	gi|449068318|ref|YP_007435400.1|	-	1.7e-05	24.1	0.4	0.0092	15.2	0.1	2.4	1	1	1	2	2	2	2	CheR	methyltransferase,	SAM	binding	domain
NodS	PF05401.6	gi|449068318|ref|YP_007435400.1|	-	0.00019	20.9	0.0	0.00033	20.1	0.0	1.3	1	0	0	1	1	1	1	Nodulation	protein	S	(NodS)
N6_N4_Mtase	PF01555.13	gi|449068318|ref|YP_007435400.1|	-	0.00021	20.8	0.0	0.12	11.8	0.0	2.4	2	0	0	2	2	2	2	DNA	methylase
CMAS	PF02353.15	gi|449068318|ref|YP_007435400.1|	-	0.00079	18.5	0.0	0.0014	17.7	0.0	1.4	2	0	0	2	2	2	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_4	PF02390.12	gi|449068318|ref|YP_007435400.1|	-	0.0027	16.7	0.0	0.81	8.7	0.0	2.1	2	0	0	2	2	2	2	Putative	methyltransferase
N2227	PF07942.7	gi|449068318|ref|YP_007435400.1|	-	0.0034	16.3	0.1	0.061	12.2	0.0	2.5	1	1	0	2	2	2	1	N2227-like	protein
Methyltransf_32	PF13679.1	gi|449068318|ref|YP_007435400.1|	-	0.0035	17.0	0.0	0.0044	16.6	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_PK	PF05891.7	gi|449068318|ref|YP_007435400.1|	-	0.0039	16.5	0.1	0.0059	15.9	0.1	1.2	1	0	0	1	1	1	1	AdoMet	dependent	proline	di-methyltransferase
MethyltransfD12	PF02086.10	gi|449068318|ref|YP_007435400.1|	-	0.0093	15.4	0.1	0.014	14.8	0.1	1.3	1	0	0	1	1	1	1	D12	class	N6	adenine-specific	DNA	methyltransferase
TrkA_N	PF02254.13	gi|449068318|ref|YP_007435400.1|	-	0.019	14.9	0.0	0.049	13.6	0.0	1.6	2	0	0	2	2	1	0	TrkA-N	domain
RrnaAD	PF00398.15	gi|449068318|ref|YP_007435400.1|	-	0.11	11.4	0.0	0.19	10.7	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	RNA	adenine	dimethylase
OCD_Mu_crystall	PF02423.10	gi|449068319|ref|YP_007435401.1|	-	2e-41	141.7	0.1	2.4e-41	141.5	0.1	1.1	1	0	0	1	1	1	1	Ornithine	cyclodeaminase/mu-crystallin	family
Shikimate_DH	PF01488.15	gi|449068319|ref|YP_007435401.1|	-	0.00039	20.5	0.0	0.00071	19.6	0.0	1.5	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|449068319|ref|YP_007435401.1|	-	0.0032	16.6	0.0	0.0059	15.7	0.0	1.5	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Ssl1	PF04056.9	gi|449068319|ref|YP_007435401.1|	-	0.11	12.0	0.0	0.2	11.2	0.0	1.4	1	0	0	1	1	1	0	Ssl1-like
Cob_adeno_trans	PF01923.13	gi|449068320|ref|YP_007435402.1|	-	4.1e-48	163.2	0.0	4.8e-48	163.0	0.0	1.0	1	0	0	1	1	1	1	Cobalamin	adenosyltransferase
DUF848	PF05852.6	gi|449068320|ref|YP_007435402.1|	-	0.042	13.7	0.3	0.093	12.5	0.2	1.4	1	1	0	1	1	1	0	Gammaherpesvirus	protein	of	unknown	function	(DUF848)
Peptidase_S8	PF00082.17	gi|449068321|ref|YP_007435403.1|	-	6.4e-07	28.7	1.2	1.5e-06	27.5	0.8	1.6	1	0	0	1	1	1	1	Subtilase	family
Pro-kuma_activ	PF09286.6	gi|449068321|ref|YP_007435403.1|	-	0.00011	22.2	0.0	0.00035	20.6	0.0	1.8	1	0	0	1	1	1	1	Pro-kumamolisin,	activation	domain
Iso_dh	PF00180.15	gi|449068322|ref|YP_007435404.1|	-	5.3e-104	347.9	0.1	6.3e-104	347.6	0.1	1.0	1	0	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
Dodecin	PF07311.7	gi|449068322|ref|YP_007435404.1|	-	0.24	11.4	1.5	0.54	10.3	0.1	2.2	2	0	0	2	2	2	0	Dodecin