#                                                                           --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
# target name        accession  query name                       accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target
#------------------- ----------             -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------
Cdc6_C	PF09079.11	gi|429216256|ref|YP_007174246.1|	-	4.7e-19	68.1	0.1	1.5e-18	66.6	0.1	1.9	1	0	0	1	1	1	1	CDC6,	C	terminal	winged	helix	domain
AAA_22	PF13401.6	gi|429216256|ref|YP_007174246.1|	-	3.7e-12	46.7	0.0	8e-12	45.6	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.6	gi|429216256|ref|YP_007174246.1|	-	1.9e-11	44.6	0.3	3.4e-08	34.0	0.0	3.5	4	0	0	4	4	4	1	AAA	ATPase	domain
AAA	PF00004.29	gi|429216256|ref|YP_007174246.1|	-	1.3e-08	35.3	0.1	5.6e-08	33.3	0.1	2.1	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
TniB	PF05621.11	gi|429216256|ref|YP_007174246.1|	-	4.1e-06	26.3	0.1	9.2e-06	25.2	0.1	1.6	2	0	0	2	2	2	1	Bacterial	TniB	protein
Bac_DnaA	PF00308.18	gi|429216256|ref|YP_007174246.1|	-	1e-05	25.5	0.6	0.068	13.0	0.2	2.2	2	0	0	2	2	2	2	Bacterial	dnaA	protein
DEAD	PF00270.29	gi|429216256|ref|YP_007174246.1|	-	0.00016	21.5	0.7	0.016	15.0	0.1	2.6	1	1	1	2	2	2	1	DEAD/DEAH	box	helicase
ATPase_2	PF01637.18	gi|429216256|ref|YP_007174246.1|	-	0.00016	21.6	6.4	0.00026	21.0	3.3	2.5	1	1	1	2	2	2	1	ATPase	domain	predominantly	from	Archaea
AAA_32	PF13654.6	gi|429216256|ref|YP_007174246.1|	-	0.00056	18.8	1.3	0.013	14.3	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_18	PF13238.6	gi|429216256|ref|YP_007174246.1|	-	0.0012	19.4	0.3	0.054	14.0	0.0	2.9	3	0	0	3	3	3	1	AAA	domain
PIF1	PF05970.14	gi|429216256|ref|YP_007174246.1|	-	0.0094	15.2	0.0	0.022	13.9	0.0	1.7	1	1	0	1	1	1	1	PIF1-like	helicase
AAA_7	PF12775.7	gi|429216256|ref|YP_007174246.1|	-	0.012	15.1	0.1	0.029	13.9	0.0	1.6	2	0	0	2	2	2	0	P-loop	containing	dynein	motor	region
AAA_assoc_2	PF16193.5	gi|429216256|ref|YP_007174246.1|	-	0.012	15.9	0.9	0.029	14.7	0.8	1.7	1	1	0	1	1	1	0	AAA	C-terminal	domain
DUF815	PF05673.13	gi|429216256|ref|YP_007174246.1|	-	0.079	12.1	0.1	0.41	9.8	0.0	2.1	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF815)
KAP_NTPase	PF07693.14	gi|429216256|ref|YP_007174246.1|	-	0.086	12.1	0.2	3.3	6.9	0.0	2.3	1	1	1	2	2	2	0	KAP	family	P-loop	domain
DUF2075	PF09848.9	gi|429216256|ref|YP_007174246.1|	-	0.087	12.0	0.0	0.12	11.6	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
NB-ARC	PF00931.22	gi|429216256|ref|YP_007174246.1|	-	0.1	11.8	0.0	0.26	10.4	0.0	1.7	1	1	0	1	1	1	0	NB-ARC	domain
RuvB_N	PF05496.12	gi|429216256|ref|YP_007174246.1|	-	0.1	12.3	0.2	3.1	7.5	0.0	2.6	3	0	0	3	3	2	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
Sigma54_activat	PF00158.26	gi|429216256|ref|YP_007174246.1|	-	0.12	12.1	0.0	0.33	10.7	0.0	1.7	2	0	0	2	2	2	0	Sigma-54	interaction	domain
NTPase_1	PF03266.15	gi|429216256|ref|YP_007174246.1|	-	0.12	12.3	1.3	0.53	10.2	1.3	2.1	1	1	0	1	1	1	0	NTPase
TsaE	PF02367.17	gi|429216256|ref|YP_007174246.1|	-	0.14	12.1	0.0	0.31	11.1	0.0	1.5	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
DUF99	PF01949.16	gi|429216257|ref|YP_007174247.1|	-	3.1e-44	150.6	0.0	3.7e-44	150.3	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF99
Hydrolase_3	PF08282.12	gi|429216257|ref|YP_007174247.1|	-	0.096	12.4	0.1	0.13	12.0	0.1	1.3	1	0	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
Lactamase_B	PF00753.27	gi|429216258|ref|YP_007174248.1|	-	1.5e-19	70.8	0.2	2.2e-19	70.2	0.2	1.2	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
pRN1_helical	PF13010.6	gi|429216258|ref|YP_007174248.1|	-	0.089	12.8	0.0	0.18	11.8	0.0	1.5	1	0	0	1	1	1	0	Primase	helical	domain
Cren7	PF11520.8	gi|429216259|ref|YP_007174249.1|	-	1.5e-24	85.7	3.1	1.6e-24	85.6	3.1	1.0	1	0	0	1	1	1	1	Chromatin	protein	Cren7
zf-LITAF-like	PF10601.9	gi|429216260|ref|YP_007174250.1|	-	0.0037	17.5	0.6	0.0037	17.5	0.6	2.0	1	1	1	2	2	2	1	LITAF-like	zinc	ribbon	domain
Ribosomal_L33	PF00471.20	gi|429216260|ref|YP_007174250.1|	-	0.0092	16.4	10.0	0.06	13.8	10.0	1.9	1	1	0	1	1	1	1	Ribosomal	protein	L33
HypA	PF01155.19	gi|429216260|ref|YP_007174250.1|	-	0.01	15.8	0.4	0.011	15.7	0.4	1.1	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
DUF4379	PF14311.6	gi|429216260|ref|YP_007174250.1|	-	0.011	16.0	2.4	0.014	15.7	2.4	1.2	1	0	0	1	1	1	0	Probable	Zinc-ribbon	domain
DUF3797	PF12677.7	gi|429216260|ref|YP_007174250.1|	-	0.13	12.1	7.1	0.43	10.5	1.8	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3797)
NOB1_Zn_bind	PF08772.11	gi|429216260|ref|YP_007174250.1|	-	0.16	12.1	4.3	0.23	11.6	4.3	1.3	1	1	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
Cys_rich_KTR	PF14205.6	gi|429216260|ref|YP_007174250.1|	-	0.17	11.7	9.3	5.7	6.8	9.3	2.1	1	1	0	1	1	1	0	Cysteine-rich	KTR
TFIIS_C	PF01096.18	gi|429216260|ref|YP_007174250.1|	-	4.7	7.1	8.6	4.2	7.3	2.4	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
tRNA-Thr_ED	PF08915.11	gi|429216261|ref|YP_007174251.1|	-	5.1e-41	140.0	0.0	9.9e-41	139.0	0.0	1.5	1	0	0	1	1	1	1	Archaea-specific	editing	domain	of	threonyl-tRNA	synthetase
HGTP_anticodon	PF03129.20	gi|429216261|ref|YP_007174251.1|	-	2e-22	79.1	0.0	8.6e-22	77.1	0.1	2.0	2	0	0	2	2	2	1	Anticodon	binding	domain
Rad51	PF08423.11	gi|429216262|ref|YP_007174252.1|	-	5.1e-92	307.7	0.0	6e-92	307.5	0.0	1.0	1	0	0	1	1	1	1	Rad51
RecA	PF00154.21	gi|429216262|ref|YP_007174252.1|	-	4.2e-13	49.4	0.1	5.8e-13	48.9	0.1	1.1	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
HHH_5	PF14520.6	gi|429216262|ref|YP_007174252.1|	-	5.2e-13	49.4	0.2	1.8e-12	47.7	0.1	2.1	2	0	0	2	2	1	1	Helix-hairpin-helix	domain
ATPase	PF06745.13	gi|429216262|ref|YP_007174252.1|	-	2.8e-10	39.9	0.0	4.5e-10	39.3	0.0	1.3	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.6	gi|429216262|ref|YP_007174252.1|	-	1.6e-07	31.1	0.0	2.4e-07	30.6	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
HHH_2	PF12826.7	gi|429216262|ref|YP_007174252.1|	-	2.7e-06	27.4	0.1	1.3e-05	25.1	0.0	2.0	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
HHH	PF00633.23	gi|429216262|ref|YP_007174252.1|	-	9.1e-06	25.3	0.1	0.0022	17.8	0.0	2.6	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
DNA_pol_lambd_f	PF10391.9	gi|429216262|ref|YP_007174252.1|	-	7e-05	22.6	0.0	0.00083	19.1	0.0	2.6	1	1	2	3	3	3	1	Fingers	domain	of	DNA	polymerase	lambda
AAA_22	PF13401.6	gi|429216262|ref|YP_007174252.1|	-	8.9e-05	22.8	0.0	0.00016	22.0	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
Cdd1	PF11731.8	gi|429216262|ref|YP_007174252.1|	-	9.5e-05	22.6	0.0	0.00022	21.4	0.0	1.6	1	0	0	1	1	1	1	Pathogenicity	locus
AAA_18	PF13238.6	gi|429216262|ref|YP_007174252.1|	-	0.0021	18.6	0.0	0.0062	17.1	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
HHH_3	PF12836.7	gi|429216262|ref|YP_007174252.1|	-	0.0027	17.9	0.0	4	7.8	0.0	2.6	2	0	0	2	2	2	2	Helix-hairpin-helix	motif
5_3_exonuc	PF01367.20	gi|429216262|ref|YP_007174252.1|	-	0.0071	16.9	0.1	0.02	15.5	0.1	1.7	1	0	0	1	1	1	1	5'-3'	exonuclease,	C-terminal	SAM	fold
BAF	PF02961.14	gi|429216262|ref|YP_007174252.1|	-	0.013	15.9	0.0	0.025	15.0	0.0	1.5	1	0	0	1	1	1	0	Barrier	to	autointegration	factor
IMS_HHH	PF11798.8	gi|429216262|ref|YP_007174252.1|	-	0.014	15.7	0.0	0.038	14.3	0.0	1.7	1	0	0	1	1	1	0	IMS	family	HHH	motif
AAA	PF00004.29	gi|429216262|ref|YP_007174252.1|	-	0.029	14.8	0.0	0.082	13.3	0.0	1.8	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sigma70_r3	PF04539.16	gi|429216262|ref|YP_007174252.1|	-	0.038	14.1	0.1	15	5.8	0.0	2.5	2	0	0	2	2	2	0	Sigma-70	region	3
PhoH	PF02562.16	gi|429216262|ref|YP_007174252.1|	-	0.082	12.4	0.2	0.35	10.3	0.0	1.9	2	0	0	2	2	2	0	PhoH-like	protein
ABC_tran	PF00005.27	gi|429216262|ref|YP_007174252.1|	-	0.11	13.0	0.0	0.2	12.1	0.0	1.4	1	0	0	1	1	1	0	ABC	transporter
SRP54	PF00448.22	gi|429216262|ref|YP_007174252.1|	-	0.12	12.0	0.0	0.2	11.3	0.0	1.3	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
Peptidase_A24	PF01478.18	gi|429216263|ref|YP_007174253.1|	-	2.4e-08	34.3	9.8	4.4e-08	33.5	9.8	1.4	1	0	0	1	1	1	1	Type	IV	leader	peptidase	family
Arc_PepC_II	PF06847.11	gi|429216263|ref|YP_007174253.1|	-	0.0002	21.8	0.3	0.0002	21.8	0.3	2.2	2	1	0	2	2	2	1	Archaeal	Peptidase	A24	C-terminus	Type	II
HIT	PF01230.23	gi|429216264|ref|YP_007174254.1|	-	9.8e-13	48.7	0.0	1.5e-12	48.1	0.0	1.3	1	0	0	1	1	1	1	HIT	domain
CwfJ_C_1	PF04677.15	gi|429216264|ref|YP_007174254.1|	-	7.6e-09	35.5	0.0	1e-08	35.0	0.0	1.2	1	0	0	1	1	1	1	Protein	similar	to	CwfJ	C-terminus	1
DcpS_C	PF11969.8	gi|429216264|ref|YP_007174254.1|	-	7.7e-05	23.1	0.0	0.00012	22.5	0.0	1.2	1	0	0	1	1	1	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
DHHA1	PF02272.19	gi|429216265|ref|YP_007174255.1|	-	2.2e-10	41.1	0.3	1.4e-08	35.3	0.0	3.1	3	1	0	3	3	3	1	DHHA1	domain
DHH	PF01368.20	gi|429216265|ref|YP_007174255.1|	-	0.003	17.8	0.1	0.006	16.8	0.1	1.5	1	0	0	1	1	1	1	DHH	family
DUF4392	PF14336.6	gi|429216265|ref|YP_007174255.1|	-	0.12	11.8	0.0	0.24	10.8	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4392)
DNA_pol3_theta	PF06440.11	gi|429216265|ref|YP_007174255.1|	-	0.2	11.3	0.1	5.3	6.8	0.0	2.4	2	0	0	2	2	2	0	DNA	polymerase	III,	theta	subunit
Ribosomal_L38e	PF01781.18	gi|429216266|ref|YP_007174256.1|	-	6e-06	26.3	3.2	6e-06	26.3	3.2	1.9	1	1	1	2	2	2	1	Ribosomal	L38e	protein	family
BUD22	PF09073.10	gi|429216266|ref|YP_007174256.1|	-	0.17	11.2	21.7	0.19	11.1	21.7	1.0	1	0	0	1	1	1	0	BUD22
Otopetrin	PF03189.13	gi|429216266|ref|YP_007174256.1|	-	3.4	6.4	3.8	5.1	5.8	3.5	1.4	1	1	0	1	1	1	0	Otopetrin
DDHD	PF02862.17	gi|429216266|ref|YP_007174256.1|	-	4.1	7.5	7.5	4.3	7.4	7.5	1.1	1	0	0	1	1	1	0	DDHD	domain
DUF3391	PF11871.8	gi|429216266|ref|YP_007174256.1|	-	6.6	7.3	14.5	3.6	8.1	11.1	2.0	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF3391)
FAM176	PF14851.6	gi|429216266|ref|YP_007174256.1|	-	7.8	6.2	10.4	15	5.3	10.4	1.5	1	0	0	1	1	1	0	FAM176	family
CoA_trans	PF01144.23	gi|429216267|ref|YP_007174257.1|	-	3.7e-44	150.7	0.3	3.6e-37	127.9	0.0	3.0	2	1	0	2	2	2	2	Coenzyme	A	transferase
Mal_decarbox_Al	PF16957.5	gi|429216267|ref|YP_007174257.1|	-	0.0023	16.3	0.1	0.0052	15.2	0.0	1.5	2	0	0	2	2	2	1	Malonate	decarboxylase,	alpha	subunit,	transporter
Hydrolase_3	PF08282.12	gi|429216268|ref|YP_007174258.1|	-	1.4e-24	87.2	0.1	4.7e-13	49.5	0.0	2.2	1	1	1	2	2	2	2	haloacid	dehalogenase-like	hydrolase
S6PP	PF05116.13	gi|429216268|ref|YP_007174258.1|	-	5.3e-08	32.7	0.0	1e-07	31.7	0.0	1.4	2	0	0	2	2	2	1	Sucrose-6F-phosphate	phosphohydrolase
Hydrolase	PF00702.26	gi|429216268|ref|YP_007174258.1|	-	8.6e-05	22.9	0.4	0.029	14.7	0.0	2.8	2	1	1	3	3	3	1	haloacid	dehalogenase-like	hydrolase
DUF2334	PF10096.9	gi|429216268|ref|YP_007174258.1|	-	0.082	12.6	0.0	0.17	11.5	0.0	1.5	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2334)
Prophage_tail	PF06605.11	gi|429216268|ref|YP_007174258.1|	-	0.15	11.2	0.0	0.23	10.6	0.0	1.2	1	0	0	1	1	1	0	Prophage	endopeptidase	tail
HAD	PF12710.7	gi|429216268|ref|YP_007174258.1|	-	0.17	12.2	0.4	11	6.4	0.0	2.9	2	1	1	3	3	3	0	haloacid	dehalogenase-like	hydrolase
Beta-Casp	PF10996.8	gi|429216269|ref|YP_007174259.1|	-	7.3e-18	64.9	0.0	1.9e-17	63.5	0.0	1.7	1	0	0	1	1	1	1	Beta-Casp	domain
RMMBL	PF07521.12	gi|429216269|ref|YP_007174259.1|	-	4.9e-15	55.2	0.1	1.5e-14	53.7	0.1	1.9	1	0	0	1	1	1	1	Zn-dependent	metallo-hydrolase	RNA	specificity	domain
Lactamase_B	PF00753.27	gi|429216269|ref|YP_007174259.1|	-	8.1e-13	48.8	0.2	1.6e-11	44.6	0.2	2.3	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|429216269|ref|YP_007174259.1|	-	6.3e-12	45.4	0.1	1.7e-11	44.0	0.0	1.7	2	0	0	2	2	2	1	Beta-lactamase	superfamily	domain
Lactamase_B_6	PF16661.5	gi|429216269|ref|YP_007174259.1|	-	5.1e-09	35.8	0.0	1.3e-08	34.6	0.0	1.6	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.6	gi|429216269|ref|YP_007174259.1|	-	5.1e-06	26.5	0.1	0.0011	18.9	0.0	2.4	2	0	0	2	2	2	2	Beta-lactamase	superfamily	domain
NAC	PF01849.18	gi|429216270|ref|YP_007174260.1|	-	1.5e-12	47.2	8.2	7.8e-12	45.0	2.3	2.4	1	1	2	3	3	3	2	NAC	domain
CUE	PF02845.16	gi|429216270|ref|YP_007174260.1|	-	0.0057	16.3	0.0	0.014	15.1	0.0	1.6	1	1	1	2	2	2	1	CUE	domain
HOIP-UBA	PF16678.5	gi|429216270|ref|YP_007174260.1|	-	0.029	14.4	0.2	0.056	13.5	0.1	1.7	2	0	0	2	2	2	0	HOIP	UBA	domain	pair
DUF1947	PF09183.10	gi|429216270|ref|YP_007174260.1|	-	0.037	14.3	0.6	0.037	14.3	0.6	2.2	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF1947)
Peptidase_C39	PF03412.15	gi|429216270|ref|YP_007174260.1|	-	0.04	13.7	0.4	0.087	12.6	0.4	1.8	1	1	0	1	1	1	0	Peptidase	C39	family
SPT6_acidic	PF14632.6	gi|429216270|ref|YP_007174260.1|	-	0.045	14.3	3.6	0.053	14.1	3.0	1.6	1	1	1	2	2	2	0	Acidic	N-terminal	SPT6
HTH_3	PF01381.22	gi|429216271|ref|YP_007174261.1|	-	2e-09	37.4	0.0	5e-07	29.7	0.0	2.5	2	0	0	2	2	2	2	Helix-turn-helix
HTH_31	PF13560.6	gi|429216271|ref|YP_007174261.1|	-	2.6e-07	30.9	0.0	1.4e-06	28.5	0.0	2.1	1	1	0	1	1	1	1	Helix-turn-helix	domain
HTH_19	PF12844.7	gi|429216271|ref|YP_007174261.1|	-	9.3e-06	25.6	0.0	0.0001	22.2	0.0	2.5	2	1	0	2	2	2	1	Helix-turn-helix	domain
MerR_1	PF13411.6	gi|429216271|ref|YP_007174261.1|	-	0.063	13.4	0.0	1.3	9.2	0.0	2.8	2	1	0	2	2	2	0	MerR	HTH	family	regulatory	protein
DUF134	PF02001.16	gi|429216271|ref|YP_007174261.1|	-	0.064	13.8	0.0	0.54	10.8	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF134
MqsA_antitoxin	PF15731.5	gi|429216271|ref|YP_007174261.1|	-	0.13	12.3	0.0	0.21	11.7	0.0	1.3	1	0	0	1	1	1	0	Antitoxin	component	of	bacterial	toxin-antitoxin	system,	MqsA
TauE	PF01925.19	gi|429216272|ref|YP_007174262.1|	-	8.5e-41	140.1	25.7	1.1e-40	139.8	25.7	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
MccV	PF17508.2	gi|429216272|ref|YP_007174262.1|	-	0.94	10.1	4.3	0.55	10.8	0.6	2.2	2	0	0	2	2	2	0	Microcin	V	bacteriocin
DUF1634	PF07843.11	gi|429216273|ref|YP_007174263.1|	-	2.6e-32	110.9	10.5	3e-32	110.7	10.5	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1634)
Adeno_E3_14_5	PF04834.12	gi|429216273|ref|YP_007174263.1|	-	0.41	11.2	3.5	0.38	11.3	0.6	2.1	2	0	0	2	2	2	0	Early	E3	14.5	kDa	protein
Peptidase_M48_N	PF16491.5	gi|429216273|ref|YP_007174263.1|	-	1.5	8.7	12.6	0.22	11.4	8.3	1.7	1	1	0	2	2	2	0	CAAX	prenyl	protease	N-terminal,	five	membrane	helices
zf-CDGSH	PF09360.10	gi|429216274|ref|YP_007174264.1|	-	1.1e-11	44.7	1.2	2.2e-11	43.8	0.4	1.8	2	0	0	2	2	2	1	Iron-binding	zinc	finger	CDGSH	type
dUTPase	PF00692.19	gi|429216275|ref|YP_007174265.1|	-	6.2e-10	38.9	0.0	1e-09	38.1	0.0	1.5	2	0	0	2	2	2	1	dUTPase
DCD	PF06559.11	gi|429216275|ref|YP_007174265.1|	-	0.016	14.0	0.0	0.028	13.2	0.0	1.4	2	0	0	2	2	2	0	2'-deoxycytidine	5'-triphosphate	deaminase	(DCD)
ATP-grasp	PF02222.22	gi|429216275|ref|YP_007174265.1|	-	0.16	11.5	0.0	1.8	8.1	0.0	2.0	2	0	0	2	2	2	0	ATP-grasp	domain
Carb_kinase	PF01256.17	gi|429216276|ref|YP_007174266.1|	-	0.012	15.1	0.0	0.019	14.4	0.0	1.3	1	0	0	1	1	1	0	Carbohydrate	kinase
SoxE	PF06525.11	gi|429216277|ref|YP_007174267.1|	-	0.0001	21.8	7.1	0.00046	19.7	6.7	2.4	1	1	1	2	2	2	1	Sulfocyanin	(SoxE)	domain
Copper-bind	PF00127.20	gi|429216277|ref|YP_007174267.1|	-	0.00014	22.3	0.0	0.00038	20.8	0.0	1.7	1	1	0	1	1	1	1	Copper	binding	proteins,	plastocyanin/azurin	family
HpaB_N	PF11794.8	gi|429216278|ref|YP_007174268.1|	-	5.9e-85	285.2	0.9	8.4e-85	284.7	0.9	1.2	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
HpaB	PF03241.13	gi|429216278|ref|YP_007174268.1|	-	1.1e-35	122.5	0.0	1.8e-35	121.9	0.0	1.3	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	C	terminal
Acyl-CoA_dh_M	PF02770.19	gi|429216278|ref|YP_007174268.1|	-	0.00019	21.6	0.0	0.00037	20.6	0.0	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
SoPB_HTH	PF18090.1	gi|429216278|ref|YP_007174268.1|	-	0.058	13.5	0.4	0.41	10.8	0.0	2.4	2	0	0	2	2	2	0	Centromere-binding	protein	HTH	domain
DUF131	PF01998.17	gi|429216279|ref|YP_007174269.1|	-	1.4e-16	59.8	11.0	1.4e-16	59.8	11.0	2.0	1	1	1	2	2	2	1	Protein	of	unknown	function	DUF131
DUF3955	PF13127.6	gi|429216279|ref|YP_007174269.1|	-	0.039	13.8	10.9	0.92	9.4	1.5	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3955)
Bac_export_2	PF01312.19	gi|429216279|ref|YP_007174269.1|	-	0.82	8.8	4.0	0.95	8.6	4.0	1.0	1	0	0	1	1	1	0	FlhB	HrpN	YscU	SpaS	Family
Brr6_like_C_C	PF10104.9	gi|429216279|ref|YP_007174269.1|	-	1.2	8.9	5.4	0.84	9.4	0.2	2.0	2	0	0	2	2	2	0	Di-sulfide	bridge	nucleocytoplasmic	transport	domain
DUF2583	PF10762.9	gi|429216279|ref|YP_007174269.1|	-	1.5	9.3	9.8	0.87	10.0	1.9	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2583)
UbiA	PF01040.18	gi|429216279|ref|YP_007174269.1|	-	1.8	7.8	10.7	3.2	7.0	10.6	1.4	1	1	0	1	1	1	0	UbiA	prenyltransferase	family
Sigma_reg_N	PF13800.6	gi|429216279|ref|YP_007174269.1|	-	2.2	8.6	11.5	7.4	6.9	1.2	2.2	2	0	0	2	2	2	0	Sigma	factor	regulator	N-terminal
DHHC	PF01529.20	gi|429216279|ref|YP_007174269.1|	-	2.4	8.3	4.7	3.5	7.7	4.7	1.2	1	0	0	1	1	1	0	DHHC	palmitoyltransferase
DUF2207	PF09972.9	gi|429216279|ref|YP_007174269.1|	-	2.6	6.7	10.7	3.5	6.3	10.7	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
VirB8	PF04335.13	gi|429216279|ref|YP_007174269.1|	-	5.7	6.7	5.6	4.1	7.2	1.6	1.9	2	0	0	2	2	2	0	VirB8	protein
DUF4083	PF13314.6	gi|429216279|ref|YP_007174269.1|	-	6.3	6.8	10.1	14	5.7	0.6	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4083)
YbjQ_1	PF01906.17	gi|429216280|ref|YP_007174270.1|	-	3.7e-35	120.7	1.3	4.3e-35	120.5	1.3	1.0	1	0	0	1	1	1	1	Putative	heavy-metal-binding
Peripla_BP_4	PF13407.6	gi|429216280|ref|YP_007174270.1|	-	0.0094	15.6	0.1	0.012	15.2	0.1	1.1	1	0	0	1	1	1	1	Periplasmic	binding	protein	domain
Fe-ADH	PF00465.19	gi|429216280|ref|YP_007174270.1|	-	0.014	14.2	0.0	0.018	13.9	0.0	1.1	1	0	0	1	1	1	0	Iron-containing	alcohol	dehydrogenase
SeleniumBinding	PF11524.8	gi|429216280|ref|YP_007174270.1|	-	0.02	15.3	0.1	0.14	12.6	0.0	2.0	2	0	0	2	2	2	0	Selenium	binding	protein
GATase	PF00117.28	gi|429216280|ref|YP_007174270.1|	-	0.073	12.8	0.0	0.078	12.7	0.0	1.1	1	0	0	1	1	1	0	Glutamine	amidotransferase	class-I
Muted	PF14942.6	gi|429216281|ref|YP_007174271.1|	-	0.03	14.7	3.2	0.035	14.5	3.2	1.2	1	0	0	1	1	1	0	Organelle	biogenesis,	Muted-like	protein
DUF131	PF01998.17	gi|429216282|ref|YP_007174272.1|	-	3e-19	68.4	8.1	3e-19	68.4	8.1	2.1	1	1	1	2	2	2	1	Protein	of	unknown	function	DUF131
DUF202	PF02656.15	gi|429216282|ref|YP_007174272.1|	-	0.0036	17.7	5.9	0.0094	16.4	5.9	1.6	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF202)
UbiA	PF01040.18	gi|429216282|ref|YP_007174272.1|	-	0.091	12.0	6.8	0.12	11.6	6.8	1.2	1	0	0	1	1	1	0	UbiA	prenyltransferase	family
MIG-14_Wnt-bd	PF06664.12	gi|429216282|ref|YP_007174272.1|	-	0.11	11.7	4.0	0.13	11.5	4.0	1.1	1	0	0	1	1	1	0	Wnt-binding	factor	required	for	Wnt	secretion
TMEM252	PF15664.5	gi|429216282|ref|YP_007174272.1|	-	0.17	11.6	1.3	1.4	8.6	0.1	2.0	2	0	0	2	2	2	0	Transmembrane	protein	252	family
Lig_chan	PF00060.26	gi|429216282|ref|YP_007174272.1|	-	0.18	11.6	0.1	0.18	11.6	0.1	1.9	1	1	0	2	2	2	0	Ligand-gated	ion	channel
DUF3357	PF11837.8	gi|429216282|ref|YP_007174272.1|	-	0.21	12.0	1.1	5.3	7.6	0.4	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3357)
PhaG_MnhG_YufB	PF03334.14	gi|429216282|ref|YP_007174272.1|	-	0.22	11.8	11.6	1.7	9.0	11.6	2.0	1	1	0	1	1	1	0	Na+/H+	antiporter	subunit
KASH	PF10541.9	gi|429216282|ref|YP_007174272.1|	-	0.49	10.7	1.5	4.2	7.7	0.9	2.0	2	0	0	2	2	2	0	Nuclear	envelope	localisation	domain
Claudin_2	PF13903.6	gi|429216282|ref|YP_007174272.1|	-	2	8.1	9.4	2.2	8.0	0.5	2.0	1	1	1	2	2	2	0	PMP-22/EMP/MP20/Claudin	tight	junction
Endomucin	PF07010.12	gi|429216282|ref|YP_007174272.1|	-	3.6	7.5	4.6	19	5.2	0.1	2.0	2	0	0	2	2	2	0	Endomucin
DUF3040	PF11239.8	gi|429216282|ref|YP_007174272.1|	-	3.9	7.8	9.1	2.6	8.4	1.2	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3040)
Phage_holin_3_6	PF07332.11	gi|429216282|ref|YP_007174272.1|	-	4.2	7.4	8.4	6.9	6.7	8.4	1.4	1	1	0	1	1	1	0	Putative	Actinobacterial	Holin-X,	holin	superfamily	III
DUF1218	PF06749.12	gi|429216282|ref|YP_007174272.1|	-	5.3	7.6	7.7	22	5.6	4.9	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1218)
Neurensin	PF14927.6	gi|429216282|ref|YP_007174272.1|	-	5.5	6.7	12.0	5.7	6.7	2.2	2.1	1	1	1	2	2	2	0	Neurensin
Baculo_11_kDa	PF06143.11	gi|429216282|ref|YP_007174272.1|	-	5.6	6.6	7.6	0.77	9.4	0.1	2.1	2	0	0	2	2	2	0	Baculovirus	11	kDa	family
DUF4282	PF14110.6	gi|429216282|ref|YP_007174272.1|	-	5.7	7.8	13.3	1e+02	3.7	13.3	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4282)
EphA2_TM	PF14575.6	gi|429216282|ref|YP_007174272.1|	-	6.2	7.8	8.2	4	8.4	0.1	2.1	2	0	0	2	2	2	0	Ephrin	type-A	receptor	2	transmembrane	domain
TMEM238	PF15125.6	gi|429216282|ref|YP_007174272.1|	-	6.4	7.0	12.7	5.4	7.3	3.5	2.3	2	1	0	2	2	2	0	TMEM238	protein	family
Sigma_reg_N	PF13800.6	gi|429216282|ref|YP_007174272.1|	-	7.2	7.0	11.4	6.5	7.1	0.8	2.1	2	0	0	2	2	2	0	Sigma	factor	regulator	N-terminal
Trm112p	PF03966.16	gi|429216283|ref|YP_007174273.1|	-	3.4e-12	46.7	1.2	5.3e-12	46.2	1.2	1.3	1	0	0	1	1	1	1	Trm112p-like	protein
DUF35_N	PF12172.8	gi|429216283|ref|YP_007174273.1|	-	0.0017	18.2	1.7	1.5	8.8	0.0	2.6	3	0	0	3	3	3	2	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Lar_restr_allev	PF14354.6	gi|429216283|ref|YP_007174273.1|	-	0.026	14.9	3.9	0.31	11.5	3.9	2.1	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
zf-TFIIB	PF13453.6	gi|429216283|ref|YP_007174273.1|	-	1	8.8	7.5	3.6	7.0	1.1	2.8	3	0	0	3	3	3	0	Transcription	factor	zinc-finger
TFIIS_C	PF01096.18	gi|429216283|ref|YP_007174273.1|	-	3.8	7.5	0.0	3.8	7.5	0.0	3.3	4	0	0	4	4	4	0	Transcription	factor	S-II	(TFIIS)
PHD	PF00628.29	gi|429216283|ref|YP_007174273.1|	-	4.4	7.3	8.5	0.49	10.3	0.8	2.6	3	0	0	3	3	3	0	PHD-finger
TF_Zn_Ribbon	PF08271.12	gi|429216283|ref|YP_007174273.1|	-	6.3	6.4	12.8	0.79	9.3	0.3	3.2	2	2	2	4	4	4	0	TFIIB	zinc-binding
PGM_PMM_I	PF02878.16	gi|429216284|ref|YP_007174274.1|	-	1.6e-44	151.0	0.0	3.3e-44	149.9	0.0	1.6	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_II	PF02879.16	gi|429216284|ref|YP_007174274.1|	-	4e-26	91.6	0.1	7.7e-26	90.7	0.1	1.5	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_III	PF02880.16	gi|429216284|ref|YP_007174274.1|	-	3.7e-16	59.3	0.0	6.3e-16	58.6	0.0	1.4	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_IV	PF00408.20	gi|429216284|ref|YP_007174274.1|	-	2.6e-09	37.1	0.0	6.4e-09	35.9	0.0	1.6	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
CinA_KH	PF18146.1	gi|429216284|ref|YP_007174274.1|	-	0.027	14.6	0.0	0.065	13.4	0.0	1.5	1	0	0	1	1	1	0	Damage-inducible	protein	CinA	KH	domain
EMG1	PF03587.14	gi|429216285|ref|YP_007174275.1|	-	6.2e-40	136.9	0.5	7.2e-40	136.7	0.5	1.0	1	0	0	1	1	1	1	EMG1/NEP1	methyltransferase
Cylicin_N	PF15241.6	gi|429216285|ref|YP_007174275.1|	-	0.069	13.3	0.0	0.13	12.4	0.0	1.4	1	0	0	1	1	1	0	Cylicin	N-terminus
Lactamase_B_2	PF12706.7	gi|429216286|ref|YP_007174276.1|	-	0.001	18.6	0.0	0.0017	17.9	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|429216286|ref|YP_007174276.1|	-	0.085	12.9	4.5	0.68	9.9	6.1	1.6	2	0	0	2	2	2	0	Metallo-beta-lactamase	superfamily
RNA_Me_trans	PF04252.13	gi|429216287|ref|YP_007174277.1|	-	3.4e-06	26.8	0.0	7.3e-06	25.7	0.0	1.5	1	0	0	1	1	1	1	Predicted	SAM-dependent	RNA	methyltransferase
RNase_HII	PF01351.18	gi|429216288|ref|YP_007174278.1|	-	1.3e-39	136.1	0.0	1.5e-39	135.9	0.0	1.1	1	0	0	1	1	1	1	Ribonuclease	HII
FeS_assembly_P	PF01883.19	gi|429216289|ref|YP_007174279.1|	-	2.1e-16	59.9	0.2	4.3e-16	58.8	0.1	1.5	1	1	1	2	2	2	1	Iron-sulfur	cluster	assembly	protein
MoCF_biosynth	PF00994.24	gi|429216290|ref|YP_007174280.1|	-	6.8e-37	126.3	0.0	1e-36	125.8	0.0	1.2	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
MFS_1	PF07690.16	gi|429216291|ref|YP_007174281.1|	-	5.2e-45	153.9	57.3	5.2e-45	153.9	57.3	3.1	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.24	gi|429216291|ref|YP_007174281.1|	-	2.1e-07	30.2	11.9	2.1e-07	30.2	11.9	3.6	1	1	0	3	3	3	3	Sugar	(and	other)	transporter
MFS_3	PF05977.13	gi|429216291|ref|YP_007174281.1|	-	9.8e-05	20.9	20.8	0.00017	20.2	1.6	2.2	2	0	0	2	2	2	2	Transmembrane	secretion	effector
ARL6IP6	PF15062.6	gi|429216291|ref|YP_007174281.1|	-	0.23	11.6	1.8	7.8	6.7	0.0	3.1	3	0	0	3	3	3	0	Haemopoietic	lineage	transmembrane	helix
ABC_tran	PF00005.27	gi|429216292|ref|YP_007174282.1|	-	2.1e-22	80.1	0.1	6.2e-22	78.6	0.0	1.7	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.6	gi|429216292|ref|YP_007174282.1|	-	4.5e-12	46.4	0.1	8.9e-06	25.7	0.0	2.2	1	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|429216292|ref|YP_007174282.1|	-	8.1e-06	25.4	0.1	0.00018	21.0	0.1	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.6	gi|429216292|ref|YP_007174282.1|	-	1.2e-05	25.9	0.3	2.1e-05	25.1	0.3	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_15	PF13175.6	gi|429216292|ref|YP_007174282.1|	-	1.5e-05	24.9	0.4	3.3e-05	23.8	0.1	1.7	2	1	0	2	2	2	1	AAA	ATPase	domain
RsgA_GTPase	PF03193.16	gi|429216292|ref|YP_007174282.1|	-	0.00015	21.8	0.1	0.00029	20.8	0.1	1.4	1	0	0	1	1	1	1	RsgA	GTPase
AAA_13	PF13166.6	gi|429216292|ref|YP_007174282.1|	-	0.0025	16.6	0.0	0.0037	16.0	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|429216292|ref|YP_007174282.1|	-	0.0034	17.7	0.0	0.0062	16.8	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
NACHT	PF05729.12	gi|429216292|ref|YP_007174282.1|	-	0.0053	16.7	0.0	0.0078	16.1	0.0	1.4	1	0	0	1	1	1	1	NACHT	domain
AAA_30	PF13604.6	gi|429216292|ref|YP_007174282.1|	-	0.0085	15.8	0.0	0.037	13.7	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
AAA_29	PF13555.6	gi|429216292|ref|YP_007174282.1|	-	0.013	15.3	0.1	0.025	14.3	0.1	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA	PF00004.29	gi|429216292|ref|YP_007174282.1|	-	0.022	15.2	0.3	0.17	12.3	0.3	2.3	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF87	PF01935.17	gi|429216292|ref|YP_007174282.1|	-	0.053	13.6	0.0	0.11	12.5	0.0	1.5	1	0	0	1	1	1	0	Helicase	HerA,	central	domain
AAA_28	PF13521.6	gi|429216292|ref|YP_007174282.1|	-	0.061	13.6	0.0	0.12	12.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
dNK	PF01712.19	gi|429216292|ref|YP_007174282.1|	-	0.087	12.7	0.0	0.14	12.0	0.0	1.3	1	0	0	1	1	1	0	Deoxynucleoside	kinase
AAA_24	PF13479.6	gi|429216292|ref|YP_007174282.1|	-	0.097	12.4	0.1	0.94	9.2	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
ATP-synt_ab	PF00006.25	gi|429216292|ref|YP_007174282.1|	-	0.099	12.3	0.1	0.14	11.8	0.1	1.2	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_5	PF07728.14	gi|429216292|ref|YP_007174282.1|	-	0.1	12.6	0.0	0.85	9.6	0.0	2.3	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
SRP54	PF00448.22	gi|429216292|ref|YP_007174282.1|	-	0.1	12.2	0.1	0.22	11.1	0.1	1.5	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA_18	PF13238.6	gi|429216292|ref|YP_007174282.1|	-	0.12	12.9	0.0	0.28	11.7	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.22	gi|429216292|ref|YP_007174282.1|	-	0.13	12.7	0.0	0.28	11.6	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
Roc	PF08477.13	gi|429216292|ref|YP_007174282.1|	-	0.13	12.5	0.1	0.31	11.3	0.0	1.6	2	0	0	2	2	1	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
Zeta_toxin	PF06414.12	gi|429216292|ref|YP_007174282.1|	-	0.13	11.5	0.0	0.24	10.6	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
TsaE	PF02367.17	gi|429216292|ref|YP_007174282.1|	-	0.16	12.0	0.1	0.29	11.1	0.1	1.4	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
ABC2_membrane	PF01061.24	gi|429216293|ref|YP_007174283.1|	-	7.4e-07	28.8	21.2	7.4e-07	28.8	21.2	1.5	1	1	0	1	1	1	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.7	gi|429216293|ref|YP_007174283.1|	-	1.6e-06	27.5	27.9	1.6e-06	27.5	27.9	1.7	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
GATase_6	PF13522.6	gi|429216294|ref|YP_007174284.1|	-	4.9e-05	23.5	0.0	7e-05	23.0	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_4	PF13230.6	gi|429216294|ref|YP_007174284.1|	-	0.002	17.1	0.0	0.0025	16.7	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
DUF2527	PF10736.9	gi|429216294|ref|YP_007174284.1|	-	0.039	13.8	0.0	0.1	12.4	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2627)
MFS_1	PF07690.16	gi|429216295|ref|YP_007174285.1|	-	1.1e-23	83.8	43.9	1.1e-23	83.8	43.9	2.0	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
MFS_3	PF05977.13	gi|429216295|ref|YP_007174285.1|	-	0.0011	17.5	6.3	0.0016	16.9	6.3	1.2	1	0	0	1	1	1	1	Transmembrane	secretion	effector
Gly-zipper_Omp	PF13488.6	gi|429216295|ref|YP_007174285.1|	-	8.4	6.5	18.1	20	5.3	12.2	2.4	2	0	0	2	2	2	0	Glycine	zipper
Inositol_P	PF00459.25	gi|429216296|ref|YP_007174286.1|	-	2.5e-20	73.1	0.0	2.9e-20	72.9	0.0	1.0	1	0	0	1	1	1	1	Inositol	monophosphatase	family
FBPase	PF00316.20	gi|429216296|ref|YP_007174286.1|	-	0.0046	16.5	0.2	0.011	15.3	0.0	1.7	2	0	0	2	2	2	1	Fructose-1-6-bisphosphatase,	N-terminal	domain
eRF1_1	PF03463.15	gi|429216297|ref|YP_007174287.1|	-	1.3e-18	67.2	0.7	3.1e-18	66.0	0.7	1.6	1	0	0	1	1	1	1	eRF1	domain	1
eRF1_3	PF03465.15	gi|429216297|ref|YP_007174287.1|	-	1.8e-16	60.6	1.1	5.9e-16	58.9	0.6	2.1	2	0	0	2	2	2	1	eRF1	domain	3
eRF1_2	PF03464.15	gi|429216297|ref|YP_007174287.1|	-	9e-06	26.0	0.1	2.4e-05	24.6	0.0	1.7	2	0	0	2	2	2	1	eRF1	domain	2
CheX	PF13690.6	gi|429216297|ref|YP_007174287.1|	-	0.041	14.1	0.1	7.5	6.8	0.0	2.6	2	0	0	2	2	2	0	Chemotaxis	phosphatase	CheX
CLP1_P	PF16575.5	gi|429216297|ref|YP_007174287.1|	-	0.045	13.5	0.0	0.082	12.7	0.0	1.4	1	0	0	1	1	1	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
ATP-synt_D	PF01813.17	gi|429216298|ref|YP_007174288.1|	-	6.3e-37	127.3	0.5	7.5e-37	127.1	0.5	1.1	1	0	0	1	1	1	1	ATP	synthase	subunit	D
DnaB_2	PF07261.11	gi|429216298|ref|YP_007174288.1|	-	0.14	11.9	1.7	0.22	11.3	0.2	1.9	2	0	0	2	2	2	0	Replication	initiation	and	membrane	attachment
PepSY_TM_like_2	PF16357.5	gi|429216299|ref|YP_007174289.1|	-	1	9.3	5.4	1.2	9.1	5.4	1.2	1	0	0	1	1	1	0	Putative	PepSY_TM-like
DEAD	PF00270.29	gi|429216300|ref|YP_007174290.1|	-	3.9e-19	69.1	0.0	2.7e-18	66.4	0.0	2.4	2	1	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.31	gi|429216300|ref|YP_007174290.1|	-	1e-14	54.8	0.0	3.6e-09	37.0	0.0	4.0	3	1	0	3	3	3	2	Helicase	conserved	C-terminal	domain
ResIII	PF04851.15	gi|429216300|ref|YP_007174290.1|	-	9.4e-07	29.0	0.0	4.5e-06	26.8	0.0	2.2	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
DUF4423	PF14394.6	gi|429216300|ref|YP_007174290.1|	-	0.081	12.6	0.1	0.3	10.8	0.1	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4423)
P2	PF07194.11	gi|429216300|ref|YP_007174290.1|	-	0.21	11.7	2.6	0.85	9.7	0.1	3.1	3	0	0	3	3	3	0	P2	response	regulator	binding	domain
TFIIB	PF00382.19	gi|429216301|ref|YP_007174291.1|	-	3.6e-14	52.6	0.2	3.6e-12	46.1	0.1	2.3	2	0	0	2	2	2	1	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.12	gi|429216301|ref|YP_007174291.1|	-	4.3e-11	42.2	0.5	4.3e-11	42.2	0.5	1.9	2	0	0	2	2	2	1	TFIIB	zinc-binding
zf-RRN7	PF11781.8	gi|429216301|ref|YP_007174291.1|	-	0.00019	21.1	0.1	0.00028	20.5	0.1	1.3	1	0	0	1	1	1	1	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
A2L_zn_ribbon	PF08792.10	gi|429216301|ref|YP_007174291.1|	-	0.0008	19.1	1.2	0.0013	18.3	1.2	1.3	1	0	0	1	1	1	1	A2L	zinc	ribbon	domain
HTH_37	PF13744.6	gi|429216301|ref|YP_007174291.1|	-	0.0021	18.0	0.3	0.13	12.2	0.0	2.8	3	0	0	3	3	3	1	Helix-turn-helix	domain
HTH_24	PF13412.6	gi|429216301|ref|YP_007174291.1|	-	0.0033	16.9	0.1	0.011	15.2	0.0	2.0	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
Sigma70_r4	PF04545.16	gi|429216301|ref|YP_007174291.1|	-	0.0059	16.1	0.0	0.015	14.8	0.0	1.6	1	0	0	1	1	1	1	Sigma-70,	region	4
Sigma70_r4_2	PF08281.12	gi|429216301|ref|YP_007174291.1|	-	0.014	15.1	0.3	0.051	13.3	0.0	2.0	2	0	0	2	2	2	0	Sigma-70,	region	4
HTH_19	PF12844.7	gi|429216301|ref|YP_007174291.1|	-	0.029	14.4	1.6	17	5.5	0.5	3.4	3	0	0	3	3	3	0	Helix-turn-helix	domain
HTH_36	PF13730.6	gi|429216301|ref|YP_007174291.1|	-	0.033	14.1	0.3	4.7	7.3	0.1	2.7	2	1	0	2	2	2	0	Helix-turn-helix	domain
Phage_rep_O	PF04492.13	gi|429216301|ref|YP_007174291.1|	-	0.039	14.5	0.5	3.8	8.2	0.1	2.8	2	1	1	3	3	3	0	Bacteriophage	replication	protein	O
Rrf2	PF02082.20	gi|429216301|ref|YP_007174291.1|	-	0.066	13.6	0.4	0.34	11.3	0.1	2.3	2	0	0	2	2	2	0	Transcriptional	regulator
RPA_interact_C	PF14768.6	gi|429216301|ref|YP_007174291.1|	-	0.089	13.4	0.1	0.17	12.5	0.1	1.5	1	0	0	1	1	1	0	Replication	protein	A	interacting	C-terminal
Cyclin_C	PF02984.19	gi|429216301|ref|YP_007174291.1|	-	0.1	12.7	0.0	0.32	11.1	0.0	1.7	2	0	0	2	2	2	0	Cyclin,	C-terminal	domain
HTH_3	PF01381.22	gi|429216301|ref|YP_007174291.1|	-	0.11	12.5	0.1	0.87	9.7	0.0	2.5	3	0	0	3	3	3	0	Helix-turn-helix
Vps36-NZF-N	PF16988.5	gi|429216301|ref|YP_007174291.1|	-	0.12	11.8	0.2	0.33	10.4	0.2	1.7	1	0	0	1	1	1	0	Vacuolar	protein	sorting	36	NZF-N	zinc-finger	domain
Gar1	PF04410.14	gi|429216302|ref|YP_007174292.1|	-	5.4e-09	36.0	0.6	6.3e-09	35.8	0.6	1.1	1	0	0	1	1	1	1	Gar1/Naf1	RNA	binding	region
HIGH_NTase1_ass	PF16581.5	gi|429216302|ref|YP_007174292.1|	-	0.0036	17.3	0.5	0.0042	17.1	0.5	1.2	1	0	0	1	1	1	1	Cytidyltransferase-related	C-terminal	region
DUF3400	PF11880.8	gi|429216303|ref|YP_007174293.1|	-	0.0079	15.7	0.1	0.016	14.7	0.1	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3400)
Vesiculo_matrix	PF06326.12	gi|429216303|ref|YP_007174293.1|	-	0.11	12.3	0.0	0.11	12.2	0.0	1.1	1	0	0	1	1	1	0	Vesiculovirus	matrix	protein
B-block_TFIIIC	PF04182.12	gi|429216304|ref|YP_007174294.1|	-	3.6e-05	23.8	0.1	5.4e-05	23.3	0.1	1.3	1	0	0	1	1	1	1	B-block	binding	subunit	of	TFIIIC
MarR	PF01047.22	gi|429216304|ref|YP_007174294.1|	-	6e-05	22.9	0.2	9.6e-05	22.2	0.2	1.4	1	0	0	1	1	1	1	MarR	family
RNA_pol_Rpc34	PF05158.12	gi|429216304|ref|YP_007174294.1|	-	0.0031	17.0	0.1	0.08	12.3	0.0	2.0	1	1	1	2	2	2	1	RNA	polymerase	Rpc34	subunit
MarR_2	PF12802.7	gi|429216304|ref|YP_007174294.1|	-	0.011	15.6	0.1	0.016	15.1	0.1	1.2	1	0	0	1	1	1	0	MarR	family
HTH_micro	PF17007.5	gi|429216304|ref|YP_007174294.1|	-	0.023	13.5	0.1	0.031	13.1	0.1	1.1	1	0	0	1	1	1	0	HTH-like
HTH_27	PF13463.6	gi|429216304|ref|YP_007174294.1|	-	0.03	14.8	0.2	0.048	14.1	0.2	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
Rio2_N	PF09202.11	gi|429216304|ref|YP_007174294.1|	-	0.049	13.9	0.1	0.076	13.2	0.1	1.3	1	0	0	1	1	1	0	Rio2,	N-terminal
HTH_29	PF13551.6	gi|429216304|ref|YP_007174294.1|	-	0.049	13.6	0.1	0.085	12.9	0.1	1.4	1	0	0	1	1	1	0	Winged	helix-turn	helix
SRP19	PF01922.17	gi|429216305|ref|YP_007174295.1|	-	3.6e-20	72.7	0.5	5.2e-20	72.2	0.5	1.2	1	0	0	1	1	1	1	SRP19	protein
Ribosomal_S26e	PF01283.19	gi|429216305|ref|YP_007174295.1|	-	0.011	16.1	0.1	0.016	15.6	0.1	1.4	1	1	0	1	1	1	0	Ribosomal	protein	S26e
Radical_SAM	PF04055.21	gi|429216306|ref|YP_007174296.1|	-	1.7e-17	64.3	0.0	4.1e-17	63.1	0.0	1.7	1	1	0	1	1	1	1	Radical	SAM	superfamily
SPASM	PF13186.6	gi|429216306|ref|YP_007174296.1|	-	3e-06	27.6	0.1	3e-05	24.5	0.0	2.6	2	1	1	3	3	3	1	Iron-sulfur	cluster-binding	domain
Fer4_12	PF13353.6	gi|429216306|ref|YP_007174296.1|	-	3.2e-05	24.2	0.0	7e-05	23.1	0.0	1.7	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|429216306|ref|YP_007174296.1|	-	0.00011	22.3	0.1	0.00063	19.9	0.0	2.2	3	0	0	3	3	3	1	4Fe-4S	single	cluster	domain
AsnC_trans_reg2	PF17805.1	gi|429216307|ref|YP_007174297.1|	-	6.3e-31	106.4	1.0	2.3e-16	59.7	0.1	2.4	2	0	0	2	2	2	2	AsnC-like	ligand	binding	domain
HTH_AsnC-type	PF13404.6	gi|429216307|ref|YP_007174297.1|	-	1.4e-06	28.1	0.0	2.6e-06	27.2	0.0	1.5	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_24	PF13412.6	gi|429216307|ref|YP_007174297.1|	-	0.00068	19.1	6.0	0.00095	18.7	2.9	2.7	2	1	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_36	PF13730.6	gi|429216307|ref|YP_007174297.1|	-	0.043	13.8	0.0	18	5.4	0.0	2.8	2	0	0	2	2	2	0	Helix-turn-helix	domain
ATPase_2	PF01637.18	gi|429216307|ref|YP_007174297.1|	-	0.071	13.0	0.9	0.31	10.9	0.0	2.0	2	0	0	2	2	2	0	ATPase	domain	predominantly	from	Archaea
TFIIE_alpha	PF02002.17	gi|429216307|ref|YP_007174297.1|	-	0.1	12.5	3.7	1.2	9.1	0.1	3.1	3	0	0	3	3	3	0	TFIIE	alpha	subunit
HTH_20	PF12840.7	gi|429216307|ref|YP_007174297.1|	-	0.13	12.4	0.0	0.27	11.3	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
YozE_SAM_like	PF06855.12	gi|429216307|ref|YP_007174297.1|	-	0.25	11.6	1.4	23	5.3	0.0	3.3	4	0	0	4	4	4	0	YozE	SAM-like	fold
Radical_SAM	PF04055.21	gi|429216308|ref|YP_007174298.1|	-	1.4e-22	80.8	0.0	3.2e-22	79.7	0.0	1.6	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|429216308|ref|YP_007174298.1|	-	6.7e-10	39.1	0.1	4.7e-09	36.4	0.1	2.2	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.6	gi|429216308|ref|YP_007174298.1|	-	3.7e-09	37.0	0.1	9.4e-09	35.7	0.1	1.7	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
SPASM	PF13186.6	gi|429216308|ref|YP_007174298.1|	-	4.6e-09	36.7	0.4	1.7e-08	34.9	0.2	2.0	2	0	0	2	2	2	1	Iron-sulfur	cluster-binding	domain
NAD_binding_7	PF13241.6	gi|429216309|ref|YP_007174299.1|	-	1.6e-23	83.1	0.2	4.6e-23	81.6	0.0	1.7	2	0	0	2	2	2	1	Putative	NAD(P)-binding
ThiF	PF00899.21	gi|429216309|ref|YP_007174299.1|	-	0.00026	20.4	0.4	0.00061	19.2	0.0	1.8	2	0	0	2	2	2	1	ThiF	family
AlaDh_PNT_C	PF01262.21	gi|429216309|ref|YP_007174299.1|	-	0.00059	19.2	0.1	0.0026	17.1	0.0	2.0	2	1	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
Shikimate_DH	PF01488.20	gi|429216309|ref|YP_007174299.1|	-	0.0011	19.0	0.2	0.0054	16.8	0.0	2.0	2	0	0	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
Spermine_synth	PF01564.17	gi|429216309|ref|YP_007174299.1|	-	0.0057	16.1	0.1	0.012	15.0	0.1	1.6	1	0	0	1	1	1	1	Spermine/spermidine	synthase	domain
F420_oxidored	PF03807.17	gi|429216309|ref|YP_007174299.1|	-	0.0087	16.6	0.5	0.02	15.5	0.2	1.8	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
Pyr_redox_3	PF13738.6	gi|429216309|ref|YP_007174299.1|	-	0.015	14.6	0.8	0.023	14.0	0.0	1.7	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
TrkA_N	PF02254.18	gi|429216309|ref|YP_007174299.1|	-	0.025	14.9	0.4	0.042	14.1	0.4	1.4	1	0	0	1	1	1	0	TrkA-N	domain
Sacchrp_dh_NADP	PF03435.18	gi|429216309|ref|YP_007174299.1|	-	0.039	14.2	0.3	0.11	12.7	0.2	1.8	1	1	1	2	2	2	0	Saccharopine	dehydrogenase	NADP	binding	domain
NAD_binding_10	PF13460.6	gi|429216309|ref|YP_007174299.1|	-	0.068	13.0	0.0	0.086	12.7	0.0	1.4	1	1	0	1	1	1	0	NAD(P)H-binding
Pyr_redox_2	PF07992.14	gi|429216309|ref|YP_007174299.1|	-	0.089	12.0	0.2	0.36	10.0	0.0	1.8	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
3HCDH_N	PF02737.18	gi|429216309|ref|YP_007174299.1|	-	0.12	12.2	0.5	0.46	10.3	0.0	2.2	2	1	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Pyr_redox	PF00070.27	gi|429216309|ref|YP_007174299.1|	-	0.18	12.3	5.8	0.24	12.0	1.7	2.7	2	1	1	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
DUF2680	PF10925.8	gi|429216309|ref|YP_007174299.1|	-	7.4	6.7	9.1	1.6	8.8	1.0	2.9	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2680)
AMP-binding	PF00501.28	gi|429216310|ref|YP_007174300.1|	-	5.6e-83	278.9	0.0	7.2e-83	278.5	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.6	gi|429216310|ref|YP_007174300.1|	-	4.9e-29	101.1	0.6	9.2e-29	100.2	0.6	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
ACAS_N	PF16177.5	gi|429216310|ref|YP_007174300.1|	-	2.4e-15	56.2	13.4	6.8e-15	54.7	13.4	1.8	1	0	0	1	1	1	1	Acetyl-coenzyme	A	synthetase	N-terminus
HIT	PF01230.23	gi|429216311|ref|YP_007174301.1|	-	5.1e-10	40.0	0.0	7.7e-10	39.4	0.0	1.3	1	0	0	1	1	1	1	HIT	domain
DcpS_C	PF11969.8	gi|429216311|ref|YP_007174301.1|	-	1.3e-07	32.1	0.1	2.7e-07	31.0	0.0	1.6	1	1	1	2	2	2	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
CoA_trans	PF01144.23	gi|429216312|ref|YP_007174302.1|	-	1.5e-13	50.6	0.0	2.1e-13	50.2	0.0	1.2	1	0	0	1	1	1	1	Coenzyme	A	transferase
CoA_trans	PF01144.23	gi|429216313|ref|YP_007174303.1|	-	2.4e-23	82.7	0.1	3.1e-23	82.3	0.1	1.1	1	0	0	1	1	1	1	Coenzyme	A	transferase
AcetylCoA_hydro	PF02550.15	gi|429216313|ref|YP_007174303.1|	-	0.017	15.1	0.1	0.18	11.8	0.0	2.3	2	0	0	2	2	2	0	Acetyl-CoA	hydrolase/transferase	N-terminal	domain
ECH_1	PF00378.20	gi|429216314|ref|YP_007174304.1|	-	2.1e-45	155.0	0.0	2.5e-45	154.7	0.0	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase
ECH_2	PF16113.5	gi|429216314|ref|YP_007174304.1|	-	7e-26	91.5	0.0	3.1e-24	86.1	0.0	2.0	1	1	1	2	2	2	2	Enoyl-CoA	hydratase/isomerase
DUF4064	PF13273.6	gi|429216315|ref|YP_007174305.1|	-	6.4e-05	23.2	20.3	6.4e-05	23.2	20.3	2.2	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF4064)
Homoserine_dh	PF00742.19	gi|429216316|ref|YP_007174306.1|	-	8.7e-41	139.7	0.3	1.2e-40	139.2	0.3	1.2	1	0	0	1	1	1	1	Homoserine	dehydrogenase
TrkA_N	PF02254.18	gi|429216316|ref|YP_007174306.1|	-	0.0059	16.8	0.2	0.026	14.8	0.1	2.3	2	1	0	2	2	2	1	TrkA-N	domain
F420_oxidored	PF03807.17	gi|429216316|ref|YP_007174306.1|	-	0.038	14.6	0.0	0.15	12.7	0.0	2.1	1	1	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
DUF4845	PF16137.5	gi|429216316|ref|YP_007174306.1|	-	0.16	12.9	1.2	0.44	11.4	0.6	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4845)
OMPdecase	PF00215.24	gi|429216317|ref|YP_007174307.1|	-	2e-25	89.7	1.5	2.7e-25	89.3	1.5	1.1	1	0	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
NanE	PF04131.14	gi|429216317|ref|YP_007174307.1|	-	0.00082	18.6	0.7	0.093	11.9	0.1	2.5	2	1	0	2	2	2	2	Putative	N-acetylmannosamine-6-phosphate	epimerase
Aldolase	PF01081.19	gi|429216317|ref|YP_007174307.1|	-	0.0015	18.0	0.7	0.0062	16.0	0.4	2.0	2	1	0	2	2	2	1	KDPG	and	KHG	aldolase
Ribul_P_3_epim	PF00834.19	gi|429216317|ref|YP_007174307.1|	-	0.0027	17.1	1.3	0.0059	16.0	1.2	1.8	1	1	0	1	1	1	1	Ribulose-phosphate	3	epimerase	family
QRPTase_C	PF01729.19	gi|429216317|ref|YP_007174307.1|	-	0.0045	16.8	0.4	0.019	14.8	0.4	2.0	1	1	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
B12-binding	PF02310.19	gi|429216317|ref|YP_007174307.1|	-	0.015	15.3	1.9	2.4	8.2	0.4	2.3	1	1	1	2	2	2	0	B12	binding	domain
PEP_hydrolase	PF09370.10	gi|429216317|ref|YP_007174307.1|	-	0.018	14.3	0.3	0.25	10.5	0.1	2.3	1	1	1	2	2	2	0	Phosphoenolpyruvate	hydrolase-like
4HFCP_synth	PF04476.13	gi|429216317|ref|YP_007174307.1|	-	0.049	13.3	0.1	0.083	12.6	0.1	1.4	1	0	0	1	1	1	0	4-HFC-P	synthase
Thiolase_C	PF02803.18	gi|429216317|ref|YP_007174307.1|	-	0.063	12.9	1.3	0.11	12.1	0.3	2.1	2	0	0	2	2	2	0	Thiolase,	C-terminal	domain
Smac_DIABLO	PF09057.10	gi|429216317|ref|YP_007174307.1|	-	0.067	12.5	0.0	0.096	12.0	0.0	1.2	1	0	0	1	1	1	0	Second	Mitochondria-derived	Activator	of	Caspases
Pro-kuma_activ	PF09286.11	gi|429216318|ref|YP_007174308.1|	-	2.7e-17	63.4	0.3	8.4e-17	61.8	0.0	1.9	2	0	0	2	2	2	1	Pro-kumamolisin,	activation	domain
MG2	PF01835.19	gi|429216318|ref|YP_007174308.1|	-	3.5e-07	30.6	0.0	0.00012	22.4	0.0	3.4	3	0	0	3	3	3	1	MG2	domain
Peptidase_S8	PF00082.22	gi|429216318|ref|YP_007174308.1|	-	0.00049	19.5	1.3	0.00049	19.5	1.3	2.0	2	0	0	2	2	2	1	Subtilase	family
FlgD_ig	PF13860.6	gi|429216318|ref|YP_007174308.1|	-	0.032	14.1	0.0	9.4	6.2	0.0	3.1	2	0	0	2	2	2	0	FlgD	Ig-like	domain
IES5	PF17335.2	gi|429216318|ref|YP_007174308.1|	-	0.18	12.1	2.0	0.48	10.7	2.0	1.7	1	0	0	1	1	1	0	Ino80	complex	subunit	5
ApoO	PF09769.9	gi|429216318|ref|YP_007174308.1|	-	0.28	11.2	2.4	0.31	11.0	0.2	2.3	2	0	0	2	2	2	0	Apolipoprotein	O
CxC4	PF18717.1	gi|429216318|ref|YP_007174308.1|	-	0.46	10.3	2.1	1.1	9.2	2.1	1.6	1	0	0	1	1	1	0	CxC4	like	cysteine	cluster	associated	with	KDZ	transposases
DUF1664	PF07889.12	gi|429216318|ref|YP_007174308.1|	-	4.4	7.4	6.6	0.65	10.0	1.4	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
PNGaseA	PF12222.8	gi|429216319|ref|YP_007174309.1|	-	5.6e-32	111.1	0.7	4.8e-30	104.8	0.7	2.1	1	1	0	1	1	1	1	Peptide	N-acetyl-beta-D-glucosaminyl	asparaginase	amidase	A
UQ_con	PF00179.26	gi|429216319|ref|YP_007174309.1|	-	0.15	11.7	0.3	0.37	10.4	0.3	1.6	1	0	0	1	1	1	0	Ubiquitin-conjugating	enzyme
DrsE_2	PF13686.6	gi|429216320|ref|YP_007174310.1|	-	1.4e-10	41.3	1.8	8.1e-08	32.3	1.8	2.0	1	1	0	1	1	1	1	DsrE/DsrF/DrsH-like	family
Thermopsin	PF05317.11	gi|429216321|ref|YP_007174311.1|	-	4.1e-26	92.0	27.2	4.1e-26	92.0	27.2	2.1	1	1	1	2	2	2	1	Thermopsin
Saf_2TM	PF18303.1	gi|429216321|ref|YP_007174311.1|	-	0.056	13.0	0.5	0.11	12.1	0.5	1.5	1	0	0	1	1	1	0	SAVED-fused	2TM	effector	domain
Plasmod_dom_1	PF09715.10	gi|429216321|ref|YP_007174311.1|	-	8.2	6.6	10.0	6	7.0	1.1	3.5	2	1	1	3	3	3	0	Plasmodium	protein	of	unknown	function	(Plasmod_dom_1)
Amidohydro_1	PF01979.20	gi|429216322|ref|YP_007174312.1|	-	4.7e-17	62.3	0.0	1.8e-12	47.3	0.0	2.1	2	0	0	2	2	2	2	Amidohydrolase	family
Amidohydro_3	PF07969.11	gi|429216322|ref|YP_007174312.1|	-	5.3e-12	46.0	0.0	4.7e-06	26.3	0.0	2.5	2	1	0	2	2	2	2	Amidohydrolase	family
PIN	PF01850.21	gi|429216323|ref|YP_007174313.1|	-	8e-19	68.3	0.1	9.1e-19	68.2	0.1	1.0	1	0	0	1	1	1	1	PIN	domain
MazE_antitoxin	PF04014.18	gi|429216324|ref|YP_007174314.1|	-	6.2e-12	45.2	1.6	9.6e-12	44.5	1.6	1.3	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE,	bacterial	antitoxin
DUF1905	PF08922.11	gi|429216324|ref|YP_007174314.1|	-	0.027	14.6	0.2	0.062	13.4	0.0	1.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1905)
Arginase	PF00491.21	gi|429216325|ref|YP_007174315.1|	-	1.4e-61	208.5	0.0	1.6e-61	208.2	0.0	1.0	1	0	0	1	1	1	1	Arginase	family
ABC_sub_bind	PF04392.12	gi|429216325|ref|YP_007174315.1|	-	0.0068	15.7	0.0	0.017	14.4	0.0	1.6	2	0	0	2	2	2	1	ABC	transporter	substrate	binding	protein
Urocanase_C	PF17392.2	gi|429216326|ref|YP_007174316.1|	-	1.4e-85	285.7	0.0	3.7e-85	284.3	0.0	1.7	2	0	0	2	2	2	1	Urocanase	C-terminal	domain
Urocanase	PF01175.18	gi|429216326|ref|YP_007174316.1|	-	5.6e-83	277.7	0.0	7.5e-83	277.3	0.0	1.2	1	0	0	1	1	1	1	Urocanase	Rossmann-like	domain
Urocanase_N	PF17391.2	gi|429216326|ref|YP_007174316.1|	-	5.2e-50	168.4	0.0	8.9e-50	167.6	0.0	1.4	1	0	0	1	1	1	1	Urocanase	N-terminal	domain
Lyase_aromatic	PF00221.19	gi|429216327|ref|YP_007174317.1|	-	2e-103	346.5	0.0	2.5e-103	346.2	0.0	1.0	1	0	0	1	1	1	1	Aromatic	amino	acid	lyase
DUF226	PF02890.14	gi|429216327|ref|YP_007174317.1|	-	0.015	15.3	0.8	0.51	10.3	0.3	2.5	2	0	0	2	2	2	0	Borrelia	family	of	unknown	function	DUF226
SRP9-21	PF05486.12	gi|429216327|ref|YP_007174317.1|	-	0.016	15.6	0.2	0.66	10.4	0.1	2.4	2	0	0	2	2	2	0	Signal	recognition	particle	9	kDa	protein	(SRP9)
Orn_Arg_deC_N	PF02784.16	gi|429216328|ref|YP_007174318.1|	-	2.6e-41	141.6	0.0	3.6e-41	141.2	0.0	1.1	1	0	0	1	1	1	1	Pyridoxal-dependent	decarboxylase,	pyridoxal	binding	domain
Orn_DAP_Arg_deC	PF00278.22	gi|429216328|ref|YP_007174318.1|	-	2.5e-24	85.4	0.0	3.3e-24	84.9	0.0	1.4	1	1	0	1	1	1	1	Pyridoxal-dependent	decarboxylase,	C-terminal	sheet	domain
Pox_M2	PF04887.12	gi|429216328|ref|YP_007174318.1|	-	0.091	12.2	0.2	0.21	11.1	0.0	1.7	2	0	0	2	2	2	0	Poxvirus	M2	protein
AA_permease_2	PF13520.6	gi|429216329|ref|YP_007174319.1|	-	9.2e-45	153.2	58.0	9.2e-45	153.2	58.0	1.9	1	1	1	2	2	2	1	Amino	acid	permease
AA_permease	PF00324.21	gi|429216329|ref|YP_007174319.1|	-	4.2e-22	78.4	59.8	5.4e-22	78.0	58.4	1.7	1	1	1	2	2	2	1	Amino	acid	permease
DUF488	PF04343.13	gi|429216330|ref|YP_007174320.1|	-	2.3e-31	108.9	1.1	2.6e-31	108.7	1.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF488
MS_channel	PF00924.18	gi|429216331|ref|YP_007174321.1|	-	3.2e-17	62.8	8.7	3.2e-17	62.8	8.7	2.2	2	1	0	2	2	2	1	Mechanosensitive	ion	channel
ABM	PF03992.16	gi|429216332|ref|YP_007174322.1|	-	2.1e-14	53.4	0.0	2.4e-14	53.2	0.0	1.1	1	0	0	1	1	1	1	Antibiotic	biosynthesis	monooxygenase
SOR	PF07682.11	gi|429216332|ref|YP_007174322.1|	-	0.00023	20.2	0.5	0.1	11.5	0.1	2.0	1	1	1	2	2	2	2	Sulphur	oxygenase	reductase
DUF4936	PF16290.5	gi|429216332|ref|YP_007174322.1|	-	0.063	14.0	0.0	0.082	13.6	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4936)
CoA_transf_3	PF02515.17	gi|429216333|ref|YP_007174323.1|	-	5.6e-137	456.8	0.0	6.3e-137	456.6	0.0	1.0	1	0	0	1	1	1	1	CoA-transferase	family	III
IF2_N	PF04760.15	gi|429216333|ref|YP_007174323.1|	-	0.0025	17.6	0.5	0.19	11.6	0.1	3.1	3	1	0	3	3	3	1	Translation	initiation	factor	IF-2,	N-terminal	region
DUF1951	PF09188.10	gi|429216333|ref|YP_007174323.1|	-	0.08	12.9	0.2	0.21	11.6	0.2	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1951)
Amidase	PF01425.21	gi|429216334|ref|YP_007174324.1|	-	1.3e-79	268.3	0.0	2.7e-78	264.0	0.0	2.1	1	1	0	1	1	1	1	Amidase
ECH_1	PF00378.20	gi|429216335|ref|YP_007174325.1|	-	3.3e-35	121.6	0.0	4e-35	121.3	0.0	1.1	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase
ECH_2	PF16113.5	gi|429216335|ref|YP_007174325.1|	-	1e-20	74.6	0.0	1.2e-20	74.3	0.0	1.1	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase
DUF1515	PF07439.11	gi|429216335|ref|YP_007174325.1|	-	2.2	8.3	5.8	11	6.2	0.2	2.9	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF1515)
DUF3311	PF11755.8	gi|429216337|ref|YP_007174327.1|	-	1.2e-09	37.9	13.7	1.7e-09	37.4	13.7	1.3	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF3311)
Syndecan	PF01034.20	gi|429216337|ref|YP_007174327.1|	-	4.8	7.2	6.0	0.69	9.9	1.4	1.7	2	0	0	2	2	2	0	Syndecan	domain
Methyltransf_31	PF13847.6	gi|429216339|ref|YP_007174329.1|	-	1.3e-17	64.0	0.1	1.6e-17	63.7	0.1	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|429216339|ref|YP_007174329.1|	-	2.6e-15	56.9	0.0	3.4e-15	56.5	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|429216339|ref|YP_007174329.1|	-	8.7e-15	55.2	0.0	1.1e-14	54.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|429216339|ref|YP_007174329.1|	-	6.7e-10	38.7	0.1	8.1e-10	38.4	0.1	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Met_10	PF02475.16	gi|429216339|ref|YP_007174329.1|	-	1.5e-09	37.9	0.5	1.9e-09	37.6	0.5	1.1	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_23	PF13489.6	gi|429216339|ref|YP_007174329.1|	-	3.3e-08	33.5	0.0	4.2e-08	33.2	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltr_RsmB-F	PF01189.17	gi|429216339|ref|YP_007174329.1|	-	5.3e-08	32.7	0.0	9.8e-08	31.9	0.0	1.3	1	1	0	1	1	1	1	16S	rRNA	methyltransferase	RsmB/F
Methyltransf_12	PF08242.12	gi|429216339|ref|YP_007174329.1|	-	1e-07	32.6	0.0	1.5e-07	32.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.19	gi|429216339|ref|YP_007174329.1|	-	3.1e-07	30.3	0.3	8.6e-07	28.9	0.1	1.7	2	0	0	2	2	2	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
PrmA	PF06325.13	gi|429216339|ref|YP_007174329.1|	-	3.8e-07	29.8	0.5	5.1e-07	29.4	0.5	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
RrnaAD	PF00398.20	gi|429216339|ref|YP_007174329.1|	-	7.8e-07	28.4	0.0	1.2e-06	27.9	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_18	PF12847.7	gi|429216339|ref|YP_007174329.1|	-	3.9e-06	26.9	0.1	8e-06	25.9	0.1	1.3	1	1	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|429216339|ref|YP_007174329.1|	-	1.9e-05	24.3	0.1	3.2e-05	23.5	0.1	1.5	1	1	0	1	1	1	1	Methyltransferase	small	domain
GidB	PF02527.15	gi|429216339|ref|YP_007174329.1|	-	3.2e-05	23.3	0.1	4e-05	23.0	0.1	1.2	1	0	0	1	1	1	1	rRNA	small	subunit	methyltransferase	G
Fibrillarin	PF01269.17	gi|429216339|ref|YP_007174329.1|	-	0.00067	18.8	0.1	0.00097	18.3	0.1	1.2	1	0	0	1	1	1	1	Fibrillarin
FtsJ	PF01728.19	gi|429216339|ref|YP_007174329.1|	-	0.00075	19.7	0.0	0.00092	19.4	0.0	1.1	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
N6_N4_Mtase	PF01555.18	gi|429216339|ref|YP_007174329.1|	-	0.0013	18.5	0.0	0.99	9.1	0.0	2.2	2	0	0	2	2	2	2	DNA	methylase
Methyltransf_16	PF10294.9	gi|429216339|ref|YP_007174329.1|	-	0.0015	18.3	0.1	0.0018	18.1	0.1	1.1	1	0	0	1	1	1	1	Lysine	methyltransferase
NNMT_PNMT_TEMT	PF01234.17	gi|429216339|ref|YP_007174329.1|	-	0.0055	15.9	0.0	0.0084	15.3	0.0	1.3	1	0	0	1	1	1	1	NNMT/PNMT/TEMT	family
TusA	PF01206.17	gi|429216339|ref|YP_007174329.1|	-	0.011	15.5	0.1	0.05	13.4	0.1	2.2	1	1	0	1	1	1	0	Sulfurtransferase	TusA
DREV	PF05219.12	gi|429216339|ref|YP_007174329.1|	-	0.013	14.6	0.0	0.048	12.8	0.0	1.7	1	1	1	2	2	2	0	DREV	methyltransferase
Methyltransf_4	PF02390.17	gi|429216339|ref|YP_007174329.1|	-	0.02	14.4	0.0	0.033	13.7	0.0	1.4	1	0	0	1	1	1	0	Putative	methyltransferase
Methyltransf_8	PF05148.15	gi|429216339|ref|YP_007174329.1|	-	0.038	13.9	0.7	0.54	10.1	0.7	2.0	1	1	0	1	1	1	0	Hypothetical	methyltransferase
Raffinose_syn	PF05691.12	gi|429216339|ref|YP_007174329.1|	-	0.059	11.2	0.1	0.069	10.9	0.1	1.0	1	0	0	1	1	1	0	Raffinose	synthase	or	seed	imbibition	protein	Sip1
ChlI	PF13541.6	gi|429216339|ref|YP_007174329.1|	-	0.061	13.2	0.1	0.086	12.7	0.1	1.2	1	0	0	1	1	1	0	Subunit	ChlI	of	Mg-chelatase
Cons_hypoth95	PF03602.15	gi|429216339|ref|YP_007174329.1|	-	0.062	12.9	0.0	0.085	12.5	0.0	1.3	1	1	0	1	1	1	0	Conserved	hypothetical	protein	95
Methyltransf_3	PF01596.17	gi|429216339|ref|YP_007174329.1|	-	0.065	12.4	0.1	0.11	11.6	0.1	1.4	1	0	0	1	1	1	0	O-methyltransferase
DUF938	PF06080.12	gi|429216339|ref|YP_007174329.1|	-	0.12	12.2	0.0	0.15	11.8	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF938)
Ta0938	PF11494.8	gi|429216340|ref|YP_007174330.1|	-	6e-55	184.0	6.2	6.6e-55	183.8	6.2	1.0	1	0	0	1	1	1	1	Ta0938
zf-H2C2_2	PF13465.6	gi|429216340|ref|YP_007174330.1|	-	0.18	12.3	0.6	0.18	12.3	0.6	1.7	2	0	0	2	2	2	0	Zinc-finger	double	domain
TENA_THI-4	PF03070.16	gi|429216341|ref|YP_007174331.1|	-	8.7e-39	133.5	2.4	1.1e-38	133.2	0.5	1.8	2	0	0	2	2	2	1	TENA/THI-4/PQQC	family
zf-C2H2_9	PF16293.5	gi|429216341|ref|YP_007174331.1|	-	2.7e-29	100.8	1.7	7e-29	99.5	1.7	1.8	1	0	0	1	1	1	1	C2H2	type	zinc-finger	(1	copy)
Haem_oxygenas_2	PF14518.6	gi|429216341|ref|YP_007174331.1|	-	8.3e-15	55.0	0.2	1.5e-14	54.1	0.1	1.4	2	0	0	2	2	2	1	Iron-containing	redox	enzyme
DUF998	PF06197.13	gi|429216342|ref|YP_007174332.1|	-	1.5e-20	73.6	7.1	1.8e-20	73.4	7.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF998)
AhpC-TSA	PF00578.21	gi|429216343|ref|YP_007174333.1|	-	7.3e-36	122.8	0.1	8.3e-36	122.6	0.1	1.0	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.10	gi|429216343|ref|YP_007174333.1|	-	5e-21	75.0	0.0	5.8e-21	74.7	0.0	1.0	1	0	0	1	1	1	1	Redoxin
AhpC-TSA_2	PF13911.6	gi|429216343|ref|YP_007174333.1|	-	1.6e-05	25.0	0.0	0.009	16.1	0.0	2.2	1	1	1	2	2	2	2	AhpC/TSA	antioxidant	enzyme
SCO1-SenC	PF02630.14	gi|429216343|ref|YP_007174333.1|	-	0.072	13.0	0.0	0.095	12.6	0.0	1.2	1	0	0	1	1	1	0	SCO1/SenC
AMP-binding	PF00501.28	gi|429216344|ref|YP_007174334.1|	-	3.7e-75	253.1	0.0	4.4e-75	252.9	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.6	gi|429216344|ref|YP_007174334.1|	-	8.6e-14	52.3	0.0	1.5e-13	51.5	0.0	1.4	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
Acyl-CoA_dh_1	PF00441.24	gi|429216345|ref|YP_007174335.1|	-	5.3e-40	137.1	0.0	8e-40	136.5	0.0	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_M	PF02770.19	gi|429216345|ref|YP_007174335.1|	-	2.1e-15	56.7	0.0	4e-15	55.8	0.0	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.11	gi|429216345|ref|YP_007174335.1|	-	4e-10	40.1	0.0	5.6e-10	39.6	0.0	1.2	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
AidB_N	PF18158.1	gi|429216345|ref|YP_007174335.1|	-	1.4e-06	28.3	0.0	2.4e-06	27.6	0.0	1.3	1	0	0	1	1	1	1	Adaptive	response	protein	AidB	N-terminal	domain
Iron_traffic	PF04362.14	gi|429216345|ref|YP_007174335.1|	-	0.12	12.1	0.0	2.1	8.1	0.0	2.8	3	0	0	3	3	3	0	Bacterial	Fe(2+)	trafficking
IGPS	PF00218.21	gi|429216346|ref|YP_007174336.1|	-	1.4e-63	214.5	0.7	1.6e-63	214.2	0.7	1.0	1	0	0	1	1	1	1	Indole-3-glycerol	phosphate	synthase
His_biosynth	PF00977.21	gi|429216346|ref|YP_007174336.1|	-	0.00079	19.0	0.0	0.021	14.3	0.0	2.2	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
FMN_dh	PF01070.18	gi|429216346|ref|YP_007174336.1|	-	0.0085	15.2	0.0	0.82	8.6	0.0	2.0	2	0	0	2	2	2	2	FMN-dependent	dehydrogenase
QRPTase_C	PF01729.19	gi|429216346|ref|YP_007174336.1|	-	0.046	13.5	0.0	0.23	11.2	0.0	1.9	1	1	1	2	2	2	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
HAUS-augmin3	PF14932.6	gi|429216346|ref|YP_007174336.1|	-	0.049	13.2	0.0	0.078	12.5	0.0	1.3	1	0	0	1	1	1	0	HAUS	augmin-like	complex	subunit	3
G3P_antiterm	PF04309.12	gi|429216346|ref|YP_007174336.1|	-	0.12	11.8	0.4	0.81	9.1	0.0	2.4	3	0	0	3	3	3	0	Glycerol-3-phosphate	responsive	antiterminator
GATase	PF00117.28	gi|429216347|ref|YP_007174337.1|	-	5.5e-48	163.3	0.1	6.6e-48	163.0	0.1	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.13	gi|429216347|ref|YP_007174337.1|	-	5.8e-12	45.8	0.0	1.2e-11	44.8	0.0	1.5	2	0	0	2	2	2	1	Peptidase	C26
SNO	PF01174.19	gi|429216347|ref|YP_007174337.1|	-	0.009	15.9	0.2	0.027	14.3	0.2	1.8	1	1	0	1	1	1	1	SNO	glutamine	amidotransferase	family
Chorismate_bind	PF00425.18	gi|429216348|ref|YP_007174338.1|	-	7.9e-88	294.3	0.0	1.3e-87	293.6	0.0	1.4	1	0	0	1	1	1	1	chorismate	binding	enzyme
Anth_synt_I_N	PF04715.13	gi|429216348|ref|YP_007174338.1|	-	4e-07	30.3	0.1	6.3e-06	26.5	0.1	2.6	2	0	0	2	2	2	1	Anthranilate	synthase	component	I,	N	terminal	region
DUF4372	PF14294.6	gi|429216348|ref|YP_007174338.1|	-	0.16	12.1	0.0	0.4	10.9	0.0	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4372)
PRAI	PF00697.22	gi|429216349|ref|YP_007174339.1|	-	3.6e-22	79.1	0.0	4.3e-22	78.8	0.0	1.1	1	0	0	1	1	1	1	N-(5'phosphoribosyl)anthranilate	(PRA)	isomerase
Glycos_transf_3	PF00591.21	gi|429216350|ref|YP_007174340.1|	-	5.3e-75	252.3	0.0	7.3e-75	251.8	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family,	a/b	domain
Glycos_trans_3N	PF02885.17	gi|429216350|ref|YP_007174340.1|	-	4.5e-12	45.6	0.2	7.7e-12	44.9	0.2	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family,	helical	bundle	domain
Trp_syntA	PF00290.20	gi|429216351|ref|YP_007174341.1|	-	9.4e-30	103.3	0.0	1.2e-29	103.0	0.0	1.1	1	0	0	1	1	1	1	Tryptophan	synthase	alpha	chain
His_biosynth	PF00977.21	gi|429216351|ref|YP_007174341.1|	-	0.01	15.3	0.1	0.021	14.3	0.1	1.4	1	0	0	1	1	1	0	Histidine	biosynthesis	protein
NMO	PF03060.15	gi|429216351|ref|YP_007174341.1|	-	0.035	13.5	0.0	0.055	12.9	0.0	1.3	1	0	0	1	1	1	0	Nitronate	monooxygenase
PALP	PF00291.25	gi|429216352|ref|YP_007174342.1|	-	6.8e-37	127.5	0.0	8.8e-37	127.1	0.0	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
Transketolase_N	PF00456.21	gi|429216353|ref|YP_007174343.1|	-	1.5e-26	93.1	0.0	1.9e-26	92.9	0.0	1.3	1	0	0	1	1	1	1	Transketolase,	thiamine	diphosphate	binding	domain
XFP_N	PF09364.10	gi|429216353|ref|YP_007174343.1|	-	1e-08	34.5	0.0	1.5e-08	33.9	0.0	1.2	1	0	0	1	1	1	1	XFP	N-terminal	domain
E1_dh	PF00676.20	gi|429216353|ref|YP_007174343.1|	-	2e-07	30.3	0.0	2.7e-07	29.9	0.0	1.1	1	0	0	1	1	1	1	Dehydrogenase	E1	component
DXP_synthase_N	PF13292.6	gi|429216353|ref|YP_007174343.1|	-	4.6e-06	26.0	0.1	7.9e-06	25.3	0.1	1.4	1	0	0	1	1	1	1	1-deoxy-D-xylulose-5-phosphate	synthase
TPP_enzyme_C	PF02775.21	gi|429216353|ref|YP_007174343.1|	-	0.0025	17.6	0.0	0.0041	16.9	0.0	1.4	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
Transket_pyr	PF02779.24	gi|429216354|ref|YP_007174344.1|	-	1.5e-33	115.9	0.0	2.3e-33	115.4	0.0	1.2	1	0	0	1	1	1	1	Transketolase,	pyrimidine	binding	domain
Transketolase_C	PF02780.20	gi|429216354|ref|YP_007174344.1|	-	4.9e-25	87.8	0.0	1.3e-24	86.4	0.0	1.7	2	0	0	2	2	2	1	Transketolase,	C-terminal	domain
PFOR_II	PF17147.4	gi|429216354|ref|YP_007174344.1|	-	4.3e-07	30.2	0.1	1.4e-05	25.3	0.0	2.3	2	0	0	2	2	2	1	Pyruvate:ferredoxin	oxidoreductase	core	domain	II
DAHP_synth_1	PF00793.20	gi|429216355|ref|YP_007174345.1|	-	6.5e-77	258.1	0.0	8.3e-77	257.7	0.0	1.0	1	0	0	1	1	1	1	DAHP	synthetase	I	family
NeuB	PF03102.14	gi|429216355|ref|YP_007174345.1|	-	2.7e-07	30.3	0.0	7.1e-07	28.9	0.0	1.8	1	1	0	1	1	1	1	NeuB	family
PGM_PMM_II	PF02879.16	gi|429216355|ref|YP_007174345.1|	-	0.0081	16.8	0.0	0.022	15.4	0.0	1.7	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
DHQ_synthase	PF01761.20	gi|429216356|ref|YP_007174346.1|	-	9.4e-90	300.3	0.2	1.2e-89	300.0	0.2	1.1	1	0	0	1	1	1	1	3-dehydroquinate	synthase
Fe-ADH_2	PF13685.6	gi|429216356|ref|YP_007174346.1|	-	8.4e-11	42.0	0.1	2e-10	40.8	0.1	1.5	1	1	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH	PF00465.19	gi|429216356|ref|YP_007174346.1|	-	0.00019	20.4	0.2	0.00031	19.7	0.0	1.4	2	0	0	2	2	2	1	Iron-containing	alcohol	dehydrogenase
Shikimate_dh_N	PF08501.11	gi|429216357|ref|YP_007174347.1|	-	5e-23	81.2	0.1	1.9e-22	79.3	0.1	2.0	2	0	0	2	2	2	1	Shikimate	dehydrogenase	substrate	binding	domain
Shikimate_DH	PF01488.20	gi|429216357|ref|YP_007174347.1|	-	9.7e-09	35.4	0.3	1.4e-08	34.8	0.3	1.3	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
SDH_C	PF18317.1	gi|429216357|ref|YP_007174347.1|	-	0.0011	18.6	0.0	0.002	17.9	0.0	1.4	1	0	0	1	1	1	1	Shikimate	5'-dehydrogenase	C-terminal	domain
Sacchrp_dh_NADP	PF03435.18	gi|429216357|ref|YP_007174347.1|	-	0.097	12.9	0.1	0.16	12.3	0.1	1.4	1	0	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
Chorismate_synt	PF01264.21	gi|429216358|ref|YP_007174348.1|	-	2.4e-121	404.5	0.0	2.8e-121	404.2	0.0	1.0	1	0	0	1	1	1	1	Chorismate	synthase
GHMP_kinases_N	PF00288.26	gi|429216359|ref|YP_007174349.1|	-	2.1e-09	37.5	0.2	3.8e-09	36.6	0.2	1.5	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.13	gi|429216359|ref|YP_007174349.1|	-	0.00035	20.9	0.0	0.00065	20.0	0.0	1.6	1	1	0	1	1	1	1	GHMP	kinases	C	terminal
ATLF	PF07737.11	gi|429216359|ref|YP_007174349.1|	-	0.024	13.9	4.3	0.13	11.6	4.3	1.9	1	1	0	1	1	1	0	Anthrax	toxin	lethal	factor,	N-	and	C-terminal	domain
DUF2608	PF11019.8	gi|429216359|ref|YP_007174349.1|	-	0.028	13.9	0.3	0.038	13.5	0.3	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2608)
EPSP_synthase	PF00275.20	gi|429216360|ref|YP_007174350.1|	-	1.4e-49	168.9	0.0	1.8e-49	168.6	0.0	1.0	1	0	0	1	1	1	1	EPSP	synthase	(3-phosphoshikimate	1-carboxyvinyltransferase)
DHquinase_I	PF01487.15	gi|429216361|ref|YP_007174351.1|	-	6.5e-07	29.8	0.0	2.4e-06	28.0	0.1	1.7	2	0	0	2	2	2	1	Type	I	3-dehydroquinase
NifW	PF03206.14	gi|429216361|ref|YP_007174351.1|	-	0.1	13.1	0.1	0.18	12.3	0.1	1.4	1	0	0	1	1	1	0	Nitrogen	fixation	protein	NifW
MFS_1	PF07690.16	gi|429216362|ref|YP_007174352.1|	-	4.7e-32	111.3	40.0	1.8e-20	73.2	13.1	2.0	2	0	0	2	2	2	2	Major	Facilitator	Superfamily
MFS_1_like	PF12832.7	gi|429216362|ref|YP_007174352.1|	-	6.7e-05	21.9	7.2	6.7e-05	21.9	7.2	2.4	1	1	1	2	2	2	1	MFS_1	like	family
MotA_ExbB	PF01618.16	gi|429216362|ref|YP_007174352.1|	-	0.019	14.7	2.0	2.5	7.8	0.2	2.7	2	0	0	2	2	2	0	MotA/TolQ/ExbB	proton	channel	family
Phosphodiest	PF01663.22	gi|429216363|ref|YP_007174353.1|	-	2.4e-18	66.9	2.6	6.4e-18	65.5	2.5	1.9	1	1	0	1	1	1	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
PglZ	PF08665.12	gi|429216363|ref|YP_007174353.1|	-	2.5e-05	24.4	0.1	0.014	15.5	0.4	2.5	2	0	0	2	2	2	2	PglZ	domain
Metalloenzyme	PF01676.18	gi|429216363|ref|YP_007174353.1|	-	0.0035	16.7	0.0	0.0059	16.0	0.0	1.3	1	0	0	1	1	1	1	Metalloenzyme	superfamily
TAFH	PF07531.14	gi|429216363|ref|YP_007174353.1|	-	0.058	13.5	0.0	0.12	12.5	0.0	1.5	1	0	0	1	1	1	0	NHR1	homology	to	TAF
AA_kinase	PF00696.28	gi|429216364|ref|YP_007174354.1|	-	2.5e-34	118.9	0.0	3.2e-34	118.6	0.0	1.1	1	0	0	1	1	1	1	Amino	acid	kinase	family
RhoGAP-FF1	PF16512.5	gi|429216364|ref|YP_007174354.1|	-	0.056	14.1	0.1	0.26	12.0	0.0	2.1	2	0	0	2	2	2	0	p190-A	and	-B	Rho	GAPs	FF	domain
Semialdhyde_dhC	PF02774.18	gi|429216365|ref|YP_007174355.1|	-	1.4e-36	126.3	0.0	2e-36	125.8	0.0	1.2	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
Semialdhyde_dh	PF01118.24	gi|429216365|ref|YP_007174355.1|	-	4.5e-29	101.4	0.0	8.9e-29	100.4	0.0	1.5	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Epimerase	PF01370.21	gi|429216365|ref|YP_007174355.1|	-	0.005	16.3	0.0	0.0077	15.7	0.0	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
DapB_N	PF01113.20	gi|429216365|ref|YP_007174355.1|	-	0.0084	16.2	0.0	0.019	15.1	0.0	1.6	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
Gp_dh_C	PF02800.20	gi|429216365|ref|YP_007174355.1|	-	0.065	12.8	0.1	0.51	9.9	0.0	2.2	2	0	0	2	2	2	0	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
GFO_IDH_MocA	PF01408.22	gi|429216365|ref|YP_007174355.1|	-	0.12	13.2	0.0	0.21	12.4	0.0	1.4	1	0	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
Exo_endo_phos	PF03372.23	gi|429216366|ref|YP_007174356.1|	-	2.1e-15	56.9	0.0	2.8e-15	56.5	0.0	1.2	1	0	0	1	1	1	1	Endonuclease/Exonuclease/phosphatase	family
Exo_endo_phos_2	PF14529.6	gi|429216366|ref|YP_007174356.1|	-	3.1e-07	30.3	0.1	9.2e-07	28.7	0.1	1.8	1	1	0	1	1	1	1	Endonuclease-reverse	transcriptase
AA_permease	PF00324.21	gi|429216367|ref|YP_007174357.1|	-	1.8e-33	115.9	63.5	4.5e-33	114.6	63.5	1.5	1	1	0	1	1	1	1	Amino	acid	permease
AA_permease_2	PF13520.6	gi|429216367|ref|YP_007174357.1|	-	1.4e-29	103.2	65.4	3.6e-29	101.9	65.4	1.5	1	1	0	1	1	1	1	Amino	acid	permease
AtpR	PF12966.7	gi|429216367|ref|YP_007174357.1|	-	0.025	15.0	0.1	0.025	15.0	0.1	4.5	6	0	0	6	6	6	0	N-ATPase,	AtpR	subunit
Amidohydro_1	PF01979.20	gi|429216368|ref|YP_007174358.1|	-	6.8e-45	153.9	2.2	7.9e-45	153.7	2.2	1.0	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.11	gi|429216368|ref|YP_007174358.1|	-	1.5e-14	54.3	0.6	2.9e-07	30.3	0.2	2.5	2	1	0	2	2	2	2	Amidohydrolase	family
Urocanase_C	PF17392.2	gi|429216368|ref|YP_007174358.1|	-	0.015	14.7	0.4	0.041	13.3	0.4	1.7	1	0	0	1	1	1	0	Urocanase	C-terminal	domain
Urease_alpha	PF00449.20	gi|429216368|ref|YP_007174358.1|	-	0.13	12.6	0.1	0.13	12.6	0.1	2.4	2	0	0	2	2	2	0	Urease	alpha-subunit,	N-terminal	domain
UBD	PF16455.5	gi|429216368|ref|YP_007174358.1|	-	0.15	12.3	0.0	0.29	11.4	0.0	1.4	1	0	0	1	1	1	0	Ubiquitin-binding	domain
RIFIN	PF02009.16	gi|429216369|ref|YP_007174359.1|	-	0.013	15.4	0.2	0.013	15.4	0.2	1.6	2	0	0	2	2	2	0	Rifin
DUF4366	PF14283.6	gi|429216369|ref|YP_007174359.1|	-	0.025	14.6	0.2	0.053	13.6	0.2	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4366)
Sporozoite_P67	PF05642.11	gi|429216369|ref|YP_007174359.1|	-	0.16	10.1	14.7	0.21	9.6	14.7	1.1	1	0	0	1	1	1	0	Sporozoite	P67	surface	antigen
FSA_C	PF10479.9	gi|429216369|ref|YP_007174359.1|	-	2.1	6.4	13.9	2.7	6.0	13.9	1.1	1	0	0	1	1	1	0	Fragile	site-associated	protein	C-terminus
DUF4330	PF14221.6	gi|429216369|ref|YP_007174359.1|	-	6.6	6.9	8.8	0.5	10.6	1.5	2.4	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4330)
Peptidase_M20	PF01546.28	gi|429216371|ref|YP_007174361.1|	-	1.1e-30	106.9	0.0	1.4e-30	106.6	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.14	gi|429216371|ref|YP_007174361.1|	-	4e-16	58.9	0.0	7.3e-16	58.1	0.0	1.5	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Peptidase_M28	PF04389.17	gi|429216371|ref|YP_007174361.1|	-	4.6e-08	33.0	0.0	7.1e-08	32.4	0.0	1.3	1	0	0	1	1	1	1	Peptidase	family	M28
Cupin_2	PF07883.11	gi|429216372|ref|YP_007174362.1|	-	7.9e-10	38.3	0.0	1.1e-09	37.8	0.0	1.2	1	0	0	1	1	1	1	Cupin	domain
AraC_binding	PF02311.19	gi|429216372|ref|YP_007174362.1|	-	6e-05	23.0	0.0	7e-05	22.7	0.0	1.2	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
HgmA	PF04209.13	gi|429216372|ref|YP_007174362.1|	-	0.00073	18.4	0.0	0.0011	17.8	0.0	1.3	1	0	0	1	1	1	1	homogentisate	1,2-dioxygenase
MannoseP_isomer	PF01050.18	gi|429216372|ref|YP_007174362.1|	-	0.0013	18.7	0.0	0.0028	17.5	0.0	1.5	2	0	0	2	2	2	1	Mannose-6-phosphate	isomerase
Cupin_1	PF00190.22	gi|429216372|ref|YP_007174362.1|	-	0.0015	18.1	0.0	0.0021	17.7	0.0	1.3	1	0	0	1	1	1	1	Cupin
Cupin_4	PF08007.12	gi|429216372|ref|YP_007174362.1|	-	0.013	15.0	0.0	0.02	14.4	0.0	1.4	1	0	0	1	1	1	0	Cupin	superfamily	protein
ARD	PF03079.14	gi|429216372|ref|YP_007174362.1|	-	0.048	13.8	0.1	0.082	13.1	0.1	1.6	1	1	0	1	1	1	0	ARD/ARD'	family
Cupin_6	PF12852.7	gi|429216372|ref|YP_007174362.1|	-	0.23	11.1	0.0	0.29	10.8	0.0	1.1	1	0	0	1	1	1	0	Cupin
AMP-binding	PF00501.28	gi|429216373|ref|YP_007174363.1|	-	1e-59	202.3	0.0	1.2e-59	202.0	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.6	gi|429216373|ref|YP_007174363.1|	-	9.2e-12	45.8	0.0	2.4e-11	44.5	0.0	1.8	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
ESCRT-II	PF05871.12	gi|429216373|ref|YP_007174363.1|	-	0.034	14.4	0.0	0.094	13.0	0.0	1.7	1	0	0	1	1	1	0	ESCRT-II	complex	subunit
AMP-binding	PF00501.28	gi|429216374|ref|YP_007174364.1|	-	4.5e-63	213.3	0.0	5.7e-63	213.0	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.6	gi|429216374|ref|YP_007174364.1|	-	1.1e-12	48.7	0.0	5.5e-12	46.5	0.0	2.1	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
ACAS_N	PF16177.5	gi|429216374|ref|YP_007174364.1|	-	1.6e-12	47.1	0.6	4e-12	45.9	0.1	2.0	2	0	0	2	2	2	1	Acetyl-coenzyme	A	synthetase	N-terminus
AMP-binding	PF00501.28	gi|429216375|ref|YP_007174365.1|	-	5.5e-71	239.4	0.0	7e-71	239.0	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.6	gi|429216375|ref|YP_007174365.1|	-	1.5e-18	67.5	0.0	3.4e-18	66.4	0.0	1.7	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
ACAS_N	PF16177.5	gi|429216375|ref|YP_007174365.1|	-	4.8e-12	45.6	4.1	1.2e-11	44.3	4.1	1.8	1	0	0	1	1	1	1	Acetyl-coenzyme	A	synthetase	N-terminus
UvsW	PF11637.8	gi|429216375|ref|YP_007174365.1|	-	0.1	12.7	1.1	1	9.5	0.1	2.5	2	0	0	2	2	2	0	ATP-dependant	DNA	helicase	UvsW
DUF1508	PF07411.12	gi|429216375|ref|YP_007174365.1|	-	0.14	12.0	0.1	0.48	10.3	0.1	1.9	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1508)
Thiolase_N	PF00108.23	gi|429216376|ref|YP_007174366.1|	-	0.08	12.3	0.1	0.26	10.6	0.1	1.7	1	1	0	1	1	1	0	Thiolase,	N-terminal	domain
Thiolase_N	PF00108.23	gi|429216377|ref|YP_007174367.1|	-	3.4e-08	33.2	0.2	1e-05	25.1	0.2	2.5	1	1	0	1	1	1	1	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.18	gi|429216377|ref|YP_007174367.1|	-	0.00026	20.6	0.0	0.79	9.4	0.0	2.8	3	0	0	3	3	3	2	Thiolase,	C-terminal	domain
ACP_syn_III	PF08545.10	gi|429216377|ref|YP_007174367.1|	-	0.019	14.8	0.0	1.3	9.0	0.0	2.6	2	0	0	2	2	2	0	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
DUF35_N	PF12172.8	gi|429216378|ref|YP_007174368.1|	-	4.6e-10	39.2	1.0	6.7e-10	38.7	1.0	1.2	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
OB_aCoA_assoc	PF01796.17	gi|429216378|ref|YP_007174368.1|	-	1.1e-08	34.9	0.0	1.8e-08	34.2	0.0	1.4	1	0	0	1	1	1	1	DUF35	OB-fold	domain,	acyl-CoA-associated
NMD3	PF04981.13	gi|429216378|ref|YP_007174368.1|	-	0.031	13.7	0.2	0.048	13.1	0.2	1.3	1	0	0	1	1	1	0	NMD3	family
DZR	PF12773.7	gi|429216378|ref|YP_007174368.1|	-	0.049	13.7	0.1	0.079	13.0	0.1	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
ADK_lid	PF05191.14	gi|429216378|ref|YP_007174368.1|	-	0.052	13.5	0.5	0.13	12.3	0.5	1.7	1	0	0	1	1	1	0	Adenylate	kinase,	active	site	lid
zinc_ribbon_2	PF13240.6	gi|429216378|ref|YP_007174368.1|	-	0.13	12.0	2.6	0.28	11.0	2.6	1.5	1	0	0	1	1	1	0	zinc-ribbon	domain
DSRB	PF10781.9	gi|429216378|ref|YP_007174368.1|	-	0.14	11.8	0.0	0.37	10.5	0.0	1.7	1	0	0	1	1	1	0	Dextransucrase	DSRB
DUF35_N	PF12172.8	gi|429216379|ref|YP_007174369.1|	-	9.7e-06	25.3	0.0	1.4e-05	24.9	0.0	1.2	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
OB_aCoA_assoc	PF01796.17	gi|429216379|ref|YP_007174369.1|	-	0.00011	22.1	0.0	0.00017	21.5	0.0	1.3	1	0	0	1	1	1	1	DUF35	OB-fold	domain,	acyl-CoA-associated
AMP-binding	PF00501.28	gi|429216380|ref|YP_007174370.1|	-	1.1e-88	297.7	0.0	1.3e-88	297.4	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.6	gi|429216380|ref|YP_007174370.1|	-	1.4e-18	67.6	0.0	2.7e-18	66.7	0.0	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
3HCDH_N	PF02737.18	gi|429216381|ref|YP_007174371.1|	-	5.2e-59	199.1	1.0	1.1e-58	198.1	1.0	1.5	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
ECH_1	PF00378.20	gi|429216381|ref|YP_007174371.1|	-	4.9e-51	173.5	0.0	8.6e-51	172.7	0.0	1.3	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase
3HCDH	PF00725.22	gi|429216381|ref|YP_007174371.1|	-	1.8e-38	131.1	0.2	2.9e-22	79.1	0.1	2.9	3	0	0	3	3	3	2	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
ECH_2	PF16113.5	gi|429216381|ref|YP_007174371.1|	-	4.3e-36	125.1	0.0	1.5e-31	110.1	0.0	3.0	2	1	1	3	3	3	2	Enoyl-CoA	hydratase/isomerase
NAD_binding_2	PF03446.15	gi|429216381|ref|YP_007174371.1|	-	4.2e-05	23.8	0.2	8.1e-05	22.8	0.2	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.23	gi|429216381|ref|YP_007174371.1|	-	0.00052	20.0	0.1	0.0012	18.8	0.1	1.7	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
UDPG_MGDP_dh_N	PF03721.14	gi|429216381|ref|YP_007174371.1|	-	0.00069	19.2	1.4	0.002	17.7	1.4	1.8	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Methyltransf_31	PF13847.6	gi|429216381|ref|YP_007174371.1|	-	0.00097	19.0	0.1	0.0027	17.5	0.1	1.8	1	0	0	1	1	1	1	Methyltransferase	domain
F420_oxidored	PF03807.17	gi|429216381|ref|YP_007174371.1|	-	0.0019	18.7	0.8	0.0084	16.7	0.2	2.4	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
Pyr_redox	PF00070.27	gi|429216381|ref|YP_007174371.1|	-	0.003	18.1	1.1	0.0099	16.4	0.6	2.3	2	0	0	2	2	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.14	gi|429216381|ref|YP_007174371.1|	-	0.0055	16.0	0.1	0.0088	15.3	0.1	1.3	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
ApbA	PF02558.16	gi|429216381|ref|YP_007174371.1|	-	0.056	13.1	0.1	0.11	12.1	0.1	1.5	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
2-Hacid_dh_C	PF02826.19	gi|429216381|ref|YP_007174371.1|	-	0.13	11.6	0.1	0.29	10.5	0.1	1.5	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
SWIRM-assoc_1	PF16495.5	gi|429216381|ref|YP_007174371.1|	-	0.55	10.2	2.0	1.2	9.1	2.0	1.6	1	0	0	1	1	1	0	SWIRM-associated	region	1
Acyl-CoA_dh_1	PF00441.24	gi|429216382|ref|YP_007174372.1|	-	5.1e-45	153.3	0.1	7.5e-45	152.8	0.1	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.16	gi|429216382|ref|YP_007174372.1|	-	2.7e-26	92.4	0.0	5.4e-26	91.5	0.0	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_M	PF02770.19	gi|429216382|ref|YP_007174372.1|	-	6.6e-24	83.9	0.0	1.2e-23	83.1	0.0	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.11	gi|429216382|ref|YP_007174372.1|	-	3.1e-15	56.6	0.0	2.1e-14	53.9	0.0	2.1	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
AMP-binding	PF00501.28	gi|429216383|ref|YP_007174373.1|	-	8.9e-66	222.2	0.0	1.1e-65	222.0	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.6	gi|429216383|ref|YP_007174373.1|	-	5.9e-15	56.0	0.3	1.4e-14	54.9	0.3	1.7	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
Vut_1	PF02592.15	gi|429216384|ref|YP_007174374.1|	-	2.2e-31	109.2	8.8	2.2e-31	109.2	8.8	2.1	2	0	0	2	2	2	1	Putative	vitamin	uptake	transporter
DUF4112	PF13430.6	gi|429216384|ref|YP_007174374.1|	-	0.029	14.7	0.9	0.029	14.7	0.9	2.4	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4112)
DUF4407	PF14362.6	gi|429216384|ref|YP_007174374.1|	-	1.1	8.6	4.2	5.2	6.3	4.2	2.1	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
Peptidase_C15	PF01470.17	gi|429216385|ref|YP_007174375.1|	-	5.4e-43	147.5	0.0	6.6e-43	147.2	0.0	1.1	1	0	0	1	1	1	1	Pyroglutamyl	peptidase
SBP_bac_5	PF00496.22	gi|429216386|ref|YP_007174376.1|	-	2.6e-48	164.9	3.2	2.6e-48	164.9	3.2	1.9	2	0	0	2	2	2	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
PKD	PF00801.20	gi|429216386|ref|YP_007174376.1|	-	6e-08	32.4	8.7	4.5e-06	26.4	0.4	3.4	3	1	0	3	3	3	2	PKD	domain
Aldo_ket_red	PF00248.21	gi|429216387|ref|YP_007174377.1|	-	2.3e-70	237.1	0.0	2.7e-70	236.9	0.0	1.0	1	0	0	1	1	1	1	Aldo/keto	reductase	family
Abhydrolase_3	PF07859.13	gi|429216388|ref|YP_007174378.1|	-	6.7e-60	202.5	0.0	8.3e-60	202.2	0.0	1.1	1	0	0	1	1	1	1	alpha/beta	hydrolase	fold
COesterase	PF00135.28	gi|429216388|ref|YP_007174378.1|	-	9.7e-07	28.0	0.0	5.4e-06	25.6	0.0	1.9	2	0	0	2	2	2	1	Carboxylesterase	family
Say1_Mug180	PF10340.9	gi|429216388|ref|YP_007174378.1|	-	3.5e-06	26.1	0.0	4.7e-06	25.7	0.0	1.2	1	0	0	1	1	1	1	Steryl	acetyl	hydrolase
Chlorophyllase2	PF12740.7	gi|429216388|ref|YP_007174378.1|	-	0.0088	15.0	0.1	0.15	11.0	0.1	2.1	1	1	0	1	1	1	1	Chlorophyllase	enzyme
Peptidase_S9	PF00326.21	gi|429216388|ref|YP_007174378.1|	-	0.061	12.8	0.0	0.22	11.0	0.0	1.8	1	1	0	1	1	1	0	Prolyl	oligopeptidase	family
CzcE	PF16986.5	gi|429216388|ref|YP_007174378.1|	-	0.14	12.5	0.0	2	8.8	0.0	2.2	2	0	0	2	2	2	0	Heavy-metal	resistance	protein	CzcE
AMP-binding_C	PF13193.6	gi|429216389|ref|YP_007174379.1|	-	1.5e-06	29.0	0.0	2.7e-06	28.3	0.0	1.4	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
Aminotran_1_2	PF00155.21	gi|429216390|ref|YP_007174380.1|	-	5.1e-10	39.1	0.0	2e-08	33.8	0.0	2.4	1	1	1	2	2	2	1	Aminotransferase	class	I	and	II
PfkB	PF00294.24	gi|429216390|ref|YP_007174380.1|	-	0.021	14.1	0.0	2.9	7.1	0.0	2.2	2	0	0	2	2	2	0	pfkB	family	carbohydrate	kinase
Aminotran_5	PF00266.19	gi|429216390|ref|YP_007174380.1|	-	0.07	12.1	0.0	0.11	11.5	0.0	1.3	1	0	0	1	1	1	0	Aminotransferase	class-V
Lactamase_B	PF00753.27	gi|429216391|ref|YP_007174381.1|	-	2.8e-06	27.5	0.0	6.2e-06	26.4	0.0	1.6	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|429216391|ref|YP_007174381.1|	-	2.2e-05	24.1	0.0	3.5e-05	23.4	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
EutA	PF06277.11	gi|429216391|ref|YP_007174381.1|	-	0.008	15.1	0.1	0.013	14.3	0.1	1.3	1	0	0	1	1	1	1	Ethanolamine	utilisation	protein	EutA
Lactamase_B_3	PF13483.6	gi|429216391|ref|YP_007174381.1|	-	0.0098	15.8	0.0	0.019	14.9	0.0	1.4	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
HTH_43	PF09904.9	gi|429216391|ref|YP_007174381.1|	-	0.065	13.2	0.1	0.37	10.8	0.0	2.3	3	0	0	3	3	3	0	Winged	helix-turn	helix
MFS_1	PF07690.16	gi|429216392|ref|YP_007174382.1|	-	8.3e-37	126.9	41.5	8.3e-37	126.9	41.5	1.8	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Metallophos	PF00149.28	gi|429216393|ref|YP_007174383.1|	-	3e-11	44.2	0.1	4.8e-11	43.5	0.1	1.3	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|429216393|ref|YP_007174383.1|	-	6.1e-09	36.3	0.0	7.8e-09	35.9	0.0	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
DUF2119	PF09892.9	gi|429216393|ref|YP_007174383.1|	-	0.03	13.7	0.0	0.054	12.9	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2119)
SAF	PF08666.12	gi|429216394|ref|YP_007174384.1|	-	4.9e-12	46.3	1.4	8.2e-12	45.6	1.4	1.4	1	1	0	1	1	1	1	SAF	domain
THDPS_M	PF14789.6	gi|429216394|ref|YP_007174384.1|	-	0.063	13.4	0.1	0.15	12.2	0.0	1.7	2	0	0	2	2	2	0	Tetrahydrodipicolinate	N-succinyltransferase	middle
GD_AH_C	PF04295.13	gi|429216395|ref|YP_007174385.1|	-	1.6e-141	471.7	0.5	1.8e-141	471.5	0.5	1.0	1	0	0	1	1	1	1	D-galactarate	dehydratase	/	Altronate	hydrolase,	C	terminus
ILVD_EDD	PF00920.21	gi|429216396|ref|YP_007174386.1|	-	3.2e-205	682.6	0.1	3.6e-205	682.5	0.1	1.0	1	0	0	1	1	1	1	Dehydratase	family
TPP_enzyme_N	PF02776.18	gi|429216398|ref|YP_007174388.1|	-	3.5e-52	176.5	0.0	6.9e-51	172.3	0.0	2.3	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.21	gi|429216398|ref|YP_007174388.1|	-	1.2e-43	148.6	0.3	1.3e-42	145.2	0.0	2.7	3	1	1	4	4	4	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.22	gi|429216398|ref|YP_007174388.1|	-	3.1e-31	107.9	0.0	6.4e-31	106.9	0.0	1.5	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
POR_N	PF01855.19	gi|429216398|ref|YP_007174388.1|	-	7.1e-05	22.7	0.0	0.00013	21.8	0.0	1.4	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Lar_N	PF09861.9	gi|429216398|ref|YP_007174388.1|	-	0.042	13.0	0.0	0.09	11.9	0.0	1.5	1	0	0	1	1	1	0	Lactate	racemase	N-terminal	domain
ACT_5	PF13710.6	gi|429216399|ref|YP_007174389.1|	-	0.001	18.8	0.0	0.0015	18.4	0.0	1.3	1	0	0	1	1	1	1	ACT	domain
IlvN	PF07991.12	gi|429216400|ref|YP_007174390.1|	-	2e-70	235.7	0.0	3.2e-70	235.0	0.0	1.3	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
IlvC	PF01450.19	gi|429216400|ref|YP_007174390.1|	-	1.5e-54	184.2	1.6	2.8e-54	183.3	1.6	1.4	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
AdoHcyase_NAD	PF00670.21	gi|429216400|ref|YP_007174390.1|	-	1e-09	38.7	0.0	5e-07	29.9	0.0	2.1	2	0	0	2	2	2	2	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.19	gi|429216400|ref|YP_007174390.1|	-	1.2e-05	24.8	0.0	2.3e-05	23.9	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.17	gi|429216400|ref|YP_007174390.1|	-	3.9e-05	24.1	0.0	0.00011	22.7	0.0	1.8	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_2	PF03446.15	gi|429216400|ref|YP_007174390.1|	-	0.002	18.3	0.0	0.0047	17.1	0.0	1.6	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.23	gi|429216400|ref|YP_007174390.1|	-	0.02	14.9	0.8	14	5.6	0.1	3.2	3	1	0	3	3	3	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
T3SchapCesA	PF11439.8	gi|429216400|ref|YP_007174390.1|	-	0.087	13.0	0.1	0.18	12.0	0.1	1.6	1	0	0	1	1	1	0	Type	III	secretion	system	filament	chaperone	CesA
FMO-like	PF00743.19	gi|429216400|ref|YP_007174390.1|	-	0.089	11.2	0.0	0.13	10.6	0.0	1.3	1	0	0	1	1	1	0	Flavin-binding	monooxygenase-like
DASH_Dad1	PF08649.10	gi|429216400|ref|YP_007174390.1|	-	0.24	11.6	3.0	0.83	9.9	0.1	3.1	4	0	0	4	4	4	0	DASH	complex	subunit	Dad1
bPH_5	PF10882.8	gi|429216401|ref|YP_007174391.1|	-	1.9e-10	40.7	0.4	1.9e-10	40.7	0.4	1.5	2	0	0	2	2	2	1	Bacterial	PH	domain
bPH_4	PF06713.11	gi|429216401|ref|YP_007174391.1|	-	0.00079	19.5	3.2	0.0088	16.1	0.5	2.5	2	0	0	2	2	2	1	Bacterial	PH	domain
EbsA	PF17255.2	gi|429216401|ref|YP_007174391.1|	-	0.013	15.8	1.7	0.013	15.8	1.7	2.6	2	1	1	3	3	3	0	EbsA-like	protein
PDR_CDR	PF06422.12	gi|429216401|ref|YP_007174391.1|	-	2.1	8.3	5.4	3.4	7.6	1.0	2.3	1	1	1	2	2	2	0	CDR	ABC	transporter
MFS_1	PF07690.16	gi|429216402|ref|YP_007174392.1|	-	4.3e-11	42.3	35.4	5.9e-06	25.4	11.0	2.0	2	0	0	2	2	2	2	Major	Facilitator	Superfamily
UbiD	PF01977.16	gi|429216403|ref|YP_007174393.1|	-	6.7e-131	436.9	0.0	7.7e-131	436.7	0.0	1.0	1	0	0	1	1	1	1	3-octaprenyl-4-hydroxybenzoate	carboxy-lyase
MFS_1	PF07690.16	gi|429216404|ref|YP_007174394.1|	-	1.9e-09	37.0	40.1	1.9e-09	37.0	40.1	2.0	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
UbiA	PF01040.18	gi|429216405|ref|YP_007174395.1|	-	3.2e-27	95.4	14.3	3.2e-27	95.4	14.3	1.5	1	1	0	1	1	1	1	UbiA	prenyltransferase	family
PNP_UDP_1	PF01048.20	gi|429216406|ref|YP_007174396.1|	-	1.5e-17	63.7	0.3	2.1e-17	63.2	0.3	1.2	1	0	0	1	1	1	1	Phosphorylase	superfamily
Ost5	PF05251.12	gi|429216406|ref|YP_007174396.1|	-	0.99	9.7	4.3	0.44	10.8	0.4	2.3	2	1	0	2	2	2	0	Oligosaccharyltransferase	subunit	5
Amidohydro_3	PF07969.11	gi|429216407|ref|YP_007174397.1|	-	3.5e-85	287.3	0.0	4e-85	287.1	0.0	1.0	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_1	PF01979.20	gi|429216407|ref|YP_007174397.1|	-	1.3e-15	57.6	0.0	1.9e-11	43.9	0.0	2.5	2	1	0	2	2	2	2	Amidohydrolase	family
DUF4905	PF16248.5	gi|429216407|ref|YP_007174397.1|	-	0.043	13.7	0.0	0.16	11.8	0.0	2.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4905)
CbiQ	PF02361.16	gi|429216408|ref|YP_007174398.1|	-	0.011	15.3	1.7	0.011	15.3	1.7	2.5	2	1	0	2	2	2	0	Cobalt	transport	protein
DUF2157	PF09925.9	gi|429216408|ref|YP_007174398.1|	-	0.49	10.2	7.4	0.15	11.8	2.6	2.3	2	1	0	2	2	2	0	Predicted	membrane	protein	(DUF2157)
NB	PF04159.13	gi|429216408|ref|YP_007174398.1|	-	0.71	9.9	5.9	0.68	10.0	1.1	2.3	2	0	0	2	2	2	0	NB	glycoprotein
DUF1230	PF06799.11	gi|429216408|ref|YP_007174398.1|	-	2.5	8.2	5.8	0.42	10.7	1.0	2.0	2	1	0	2	2	2	0	Conserved	in	the	green	lineage	and	diatoms	27
DUF454	PF04304.13	gi|429216408|ref|YP_007174398.1|	-	3.6	7.6	11.8	0.18	11.8	2.2	2.4	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF454)
S_4TM	PF18159.1	gi|429216408|ref|YP_007174398.1|	-	3.9	6.7	12.0	0.37	10.1	0.6	2.6	3	0	0	3	3	3	0	SMODS-associating	4TM	effector	domain
ATPase	PF06745.13	gi|429216409|ref|YP_007174399.1|	-	1e-48	165.7	4.9	1.2e-48	165.5	4.9	1.1	1	0	0	1	1	1	1	KaiC
DnaB_C	PF03796.15	gi|429216409|ref|YP_007174399.1|	-	6.9e-09	35.4	0.0	1.2e-08	34.6	0.0	1.5	1	0	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
AAA_25	PF13481.6	gi|429216409|ref|YP_007174399.1|	-	4.3e-07	29.7	0.0	6.6e-07	29.1	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|429216409|ref|YP_007174399.1|	-	6.5e-07	29.7	0.0	1.3e-06	28.7	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_14	PF13173.6	gi|429216409|ref|YP_007174399.1|	-	2.7e-05	24.2	1.8	0.00013	22.0	1.1	2.4	2	1	0	2	2	2	1	AAA	domain
GvpD	PF07088.11	gi|429216409|ref|YP_007174399.1|	-	3e-05	22.9	1.1	6.3e-05	21.8	1.1	1.4	1	1	0	1	1	1	1	GvpD	gas	vesicle	protein
AAA_24	PF13479.6	gi|429216409|ref|YP_007174399.1|	-	7.6e-05	22.5	2.5	0.00016	21.5	2.5	1.5	1	1	0	1	1	1	1	AAA	domain
TsaE	PF02367.17	gi|429216409|ref|YP_007174399.1|	-	0.00013	22.0	0.0	0.0095	15.9	0.0	2.3	2	0	0	2	2	2	1	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA	PF00004.29	gi|429216409|ref|YP_007174399.1|	-	0.00014	22.3	0.6	0.00035	21.0	0.5	1.7	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_18	PF13238.6	gi|429216409|ref|YP_007174399.1|	-	0.00018	22.0	0.0	0.00036	21.1	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
TniB	PF05621.11	gi|429216409|ref|YP_007174399.1|	-	0.00046	19.7	1.0	0.0055	16.1	1.0	2.1	1	1	0	1	1	1	1	Bacterial	TniB	protein
AAA_16	PF13191.6	gi|429216409|ref|YP_007174399.1|	-	0.00053	20.4	0.0	0.00095	19.6	0.0	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
NACHT	PF05729.12	gi|429216409|ref|YP_007174399.1|	-	0.00069	19.6	0.0	0.0012	18.8	0.0	1.5	1	1	0	1	1	1	1	NACHT	domain
DUF2075	PF09848.9	gi|429216409|ref|YP_007174399.1|	-	0.0008	18.7	0.0	0.0011	18.2	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
Zeta_toxin	PF06414.12	gi|429216409|ref|YP_007174399.1|	-	0.0015	17.9	0.0	0.0026	17.1	0.0	1.3	1	0	0	1	1	1	1	Zeta	toxin
Roc	PF08477.13	gi|429216409|ref|YP_007174399.1|	-	0.0019	18.4	0.0	0.0034	17.6	0.0	1.5	1	0	0	1	1	1	1	Ras	of	Complex,	Roc,	domain	of	DAPkinase
Rad51	PF08423.11	gi|429216409|ref|YP_007174399.1|	-	0.0023	17.2	0.1	0.0036	16.6	0.1	1.3	1	0	0	1	1	1	1	Rad51
ABC_tran	PF00005.27	gi|429216409|ref|YP_007174399.1|	-	0.0038	17.8	0.1	0.0082	16.7	0.1	1.5	1	1	0	1	1	1	1	ABC	transporter
SRP54	PF00448.22	gi|429216409|ref|YP_007174399.1|	-	0.004	16.8	0.6	0.0067	16.1	0.1	1.6	2	0	0	2	2	1	1	SRP54-type	protein,	GTPase	domain
PhoH	PF02562.16	gi|429216409|ref|YP_007174399.1|	-	0.0066	15.9	0.0	0.015	14.8	0.0	1.5	1	0	0	1	1	1	1	PhoH-like	protein
IstB_IS21	PF01695.17	gi|429216409|ref|YP_007174399.1|	-	0.0069	16.1	0.1	0.017	14.9	0.0	1.7	2	0	0	2	2	1	1	IstB-like	ATP	binding	protein
AAA_7	PF12775.7	gi|429216409|ref|YP_007174399.1|	-	0.0094	15.5	0.0	0.02	14.4	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	dynein	motor	region
NTPase_1	PF03266.15	gi|429216409|ref|YP_007174399.1|	-	0.0097	15.8	0.2	0.029	14.3	0.0	1.9	2	0	0	2	2	1	1	NTPase
NB-ARC	PF00931.22	gi|429216409|ref|YP_007174399.1|	-	0.014	14.6	0.0	0.027	13.7	0.0	1.4	1	1	0	1	1	1	0	NB-ARC	domain
ATP-synt_ab	PF00006.25	gi|429216409|ref|YP_007174399.1|	-	0.015	14.9	0.0	0.019	14.7	0.0	1.3	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_5	PF07728.14	gi|429216409|ref|YP_007174399.1|	-	0.022	14.8	0.2	0.97	9.4	0.1	3.1	2	1	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
CobA_CobO_BtuR	PF02572.15	gi|429216409|ref|YP_007174399.1|	-	0.023	15.0	0.0	0.034	14.4	0.0	1.3	1	0	0	1	1	1	0	ATP:corrinoid	adenosyltransferase	BtuR/CobO/CobP
RuvB_N	PF05496.12	gi|429216409|ref|YP_007174399.1|	-	0.024	14.4	0.2	0.072	12.8	0.0	1.9	2	0	0	2	2	1	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
RNA_helicase	PF00910.22	gi|429216409|ref|YP_007174399.1|	-	0.026	14.9	0.1	0.054	13.9	0.1	1.5	1	0	0	1	1	1	0	RNA	helicase
Rad17	PF03215.15	gi|429216409|ref|YP_007174399.1|	-	0.038	13.9	2.7	0.026	14.4	0.8	1.7	2	0	0	2	2	1	0	Rad17	P-loop	domain
T2SSE	PF00437.20	gi|429216409|ref|YP_007174399.1|	-	0.039	13.0	0.0	0.067	12.2	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
ArsA_ATPase	PF02374.15	gi|429216409|ref|YP_007174399.1|	-	0.04	13.1	0.3	0.34	10.0	0.0	2.0	2	0	0	2	2	2	0	Anion-transporting	ATPase
Sigma54_activat	PF00158.26	gi|429216409|ref|YP_007174399.1|	-	0.041	13.6	0.0	0.088	12.5	0.0	1.5	1	0	0	1	1	1	0	Sigma-54	interaction	domain
ResIII	PF04851.15	gi|429216409|ref|YP_007174399.1|	-	0.043	13.8	0.1	0.08	12.9	0.1	1.5	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
AAA_33	PF13671.6	gi|429216409|ref|YP_007174399.1|	-	0.046	13.9	0.0	0.095	12.9	0.0	1.4	1	1	0	1	1	1	0	AAA	domain
RsgA_GTPase	PF03193.16	gi|429216409|ref|YP_007174399.1|	-	0.062	13.2	0.4	0.16	11.9	0.0	1.8	2	0	0	2	2	2	0	RsgA	GTPase
AAA_29	PF13555.6	gi|429216409|ref|YP_007174399.1|	-	0.063	13.0	0.0	0.44	10.3	0.0	2.3	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
AAA_17	PF13207.6	gi|429216409|ref|YP_007174399.1|	-	0.069	13.6	0.1	0.21	12.0	0.1	2.0	1	1	0	1	1	1	0	AAA	domain
DEAD	PF00270.29	gi|429216409|ref|YP_007174399.1|	-	0.072	12.9	0.0	0.25	11.1	0.0	1.9	1	1	0	1	1	1	0	DEAD/DEAH	box	helicase
KTI12	PF08433.10	gi|429216409|ref|YP_007174399.1|	-	0.075	12.5	0.2	0.38	10.2	0.0	2.1	2	1	1	3	3	3	0	Chromatin	associated	protein	KTI12
ELP6	PF09807.9	gi|429216409|ref|YP_007174399.1|	-	0.095	12.1	0.3	3.3	7.1	0.0	2.1	1	1	1	2	2	2	0	Elongation	complex	protein	6
Sigma54_activ_2	PF14532.6	gi|429216409|ref|YP_007174399.1|	-	0.11	12.6	0.0	0.3	11.2	0.0	1.7	1	1	0	1	1	1	0	Sigma-54	interaction	domain
MMR_HSR1	PF01926.23	gi|429216409|ref|YP_007174399.1|	-	0.14	12.3	0.6	0.32	11.1	0.6	2.0	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_19	PF13245.6	gi|429216409|ref|YP_007174399.1|	-	0.15	12.4	0.1	0.25	11.7	0.1	1.5	1	1	0	1	1	1	0	AAA	domain
MeaB	PF03308.16	gi|429216409|ref|YP_007174399.1|	-	0.18	10.8	0.0	0.31	10.0	0.0	1.3	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
AAA_11	PF13086.6	gi|429216409|ref|YP_007174399.1|	-	0.21	11.3	0.0	0.34	10.6	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
MFS_1	PF07690.16	gi|429216410|ref|YP_007174400.1|	-	8.2e-19	67.7	71.4	1.4e-16	60.4	38.6	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
FmdA_AmdA	PF03069.15	gi|429216411|ref|YP_007174401.1|	-	1.2e-54	185.6	0.0	2.1e-33	115.7	0.0	2.0	1	1	1	2	2	2	2	Acetamidase/Formamidase	family
ApbA_C	PF08546.11	gi|429216412|ref|YP_007174402.1|	-	1.9e-21	76.6	0.1	3.5e-21	75.7	0.1	1.4	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA	C	terminal
ApbA	PF02558.16	gi|429216412|ref|YP_007174402.1|	-	4.2e-15	55.7	0.1	1.3e-14	54.1	0.1	1.8	1	1	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
F420_oxidored	PF03807.17	gi|429216412|ref|YP_007174402.1|	-	5.2e-06	27.0	0.1	1.4e-05	25.6	0.1	1.7	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
2-Hacid_dh_C	PF02826.19	gi|429216412|ref|YP_007174402.1|	-	0.0029	17.0	0.1	0.0048	16.3	0.1	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Rossmann-like	PF10727.9	gi|429216412|ref|YP_007174402.1|	-	0.0039	17.0	0.0	0.0058	16.5	0.0	1.3	1	0	0	1	1	1	1	Rossmann-like	domain
UDPG_MGDP_dh_N	PF03721.14	gi|429216412|ref|YP_007174402.1|	-	0.0077	15.8	0.4	0.018	14.6	0.4	1.7	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
3HCDH_N	PF02737.18	gi|429216412|ref|YP_007174402.1|	-	0.014	15.3	0.1	0.03	14.2	0.1	1.6	1	1	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_2	PF03446.15	gi|429216412|ref|YP_007174402.1|	-	0.033	14.4	0.0	0.075	13.2	0.0	1.6	1	1	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Pantoate_transf	PF02548.15	gi|429216413|ref|YP_007174403.1|	-	7.4e-104	346.7	0.0	8.4e-104	346.5	0.0	1.0	1	0	0	1	1	1	1	Ketopantoate	hydroxymethyltransferase
PEP_mutase	PF13714.6	gi|429216413|ref|YP_007174403.1|	-	3e-05	23.6	0.0	0.00011	21.8	0.0	1.8	1	1	1	2	2	2	1	Phosphoenolpyruvate	phosphomutase
ENOD93	PF03386.14	gi|429216413|ref|YP_007174403.1|	-	0.097	12.6	0.0	0.19	11.6	0.0	1.4	1	0	0	1	1	1	0	Early	nodulin	93	ENOD93	protein
TMP-TENI	PF02581.17	gi|429216413|ref|YP_007174403.1|	-	0.16	11.3	0.5	1.4	8.3	0.0	2.4	3	0	0	3	3	3	0	Thiamine	monophosphate	synthase
AA_permease_2	PF13520.6	gi|429216414|ref|YP_007174404.1|	-	9.9e-29	100.4	57.6	9.9e-29	100.4	57.6	2.0	1	1	1	2	2	2	1	Amino	acid	permease
AA_permease	PF00324.21	gi|429216414|ref|YP_007174404.1|	-	1.5e-18	66.7	40.1	1.5e-18	66.7	40.1	2.1	2	0	0	2	2	2	2	Amino	acid	permease
HTH_10	PF04967.12	gi|429216415|ref|YP_007174405.1|	-	1.6e-17	63.1	0.0	2.6e-17	62.4	0.0	1.4	1	0	0	1	1	1	1	HTH	DNA	binding	domain
HTH_5	PF01022.20	gi|429216415|ref|YP_007174405.1|	-	0.015	15.1	0.0	0.04	13.8	0.0	1.8	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
CoA_transf_3	PF02515.17	gi|429216416|ref|YP_007174406.1|	-	4.7e-85	285.9	0.0	5.2e-85	285.8	0.0	1.0	1	0	0	1	1	1	1	CoA-transferase	family	III
Picorna_P3A	PF06363.11	gi|429216416|ref|YP_007174406.1|	-	0.16	11.9	0.0	11	5.9	0.0	3.0	3	0	0	3	3	3	0	Picornaviridae	P3A	protein
HMGL-like	PF00682.19	gi|429216417|ref|YP_007174407.1|	-	1.3e-43	149.4	0.0	5.7e-43	147.4	0.0	1.9	1	1	0	1	1	1	1	HMGL-like
DUF3146	PF11344.8	gi|429216417|ref|YP_007174407.1|	-	0.088	12.5	0.0	2.9	7.6	0.0	2.9	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3146)
SBDS_C	PF09377.10	gi|429216417|ref|YP_007174407.1|	-	0.1	12.6	2.0	2.7	8.0	0.1	3.3	2	2	0	2	2	2	0	SBDS	protein	C-terminal	domain
DUF1002	PF06207.11	gi|429216417|ref|YP_007174407.1|	-	0.4	10.2	0.1	0.4	10.2	0.1	2.8	3	1	1	4	4	4	0	Protein	of	unknown	function	(DUF1002)
MFS_1	PF07690.16	gi|429216418|ref|YP_007174408.1|	-	5.9e-32	111.0	45.7	2.7e-30	105.5	26.3	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.24	gi|429216418|ref|YP_007174408.1|	-	1.8e-29	102.9	22.6	3.4e-29	102.0	22.6	1.4	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_4	PF06779.14	gi|429216418|ref|YP_007174408.1|	-	0.0002	20.8	9.8	0.04	13.2	2.5	2.4	2	1	0	2	2	2	2	Uncharacterised	MFS-type	transporter	YbfB
Glycos_transf_2	PF00535.26	gi|429216419|ref|YP_007174409.1|	-	2.5e-17	63.2	0.1	3.5e-17	62.7	0.1	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|429216419|ref|YP_007174409.1|	-	0.00014	21.9	0.0	0.00019	21.4	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_transf_49	PF13896.6	gi|429216419|ref|YP_007174409.1|	-	0.00041	19.8	0.0	0.00054	19.4	0.0	1.3	1	0	0	1	1	1	1	Glycosyl-transferase	for	dystroglycan
Glyco_tranf_2_4	PF13704.6	gi|429216419|ref|YP_007174409.1|	-	0.014	15.8	0.1	0.035	14.6	0.1	1.7	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
DUF3206	PF11472.8	gi|429216419|ref|YP_007174409.1|	-	0.11	12.4	0.5	0.63	10.0	0.1	2.3	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3206)
TPP_enzyme_N	PF02776.18	gi|429216420|ref|YP_007174410.1|	-	4.5e-38	130.5	0.0	7.2e-38	129.9	0.0	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.21	gi|429216420|ref|YP_007174410.1|	-	1.6e-35	122.1	0.0	2.6e-34	118.2	0.0	2.3	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.22	gi|429216420|ref|YP_007174410.1|	-	2.6e-17	62.9	0.0	5.4e-17	61.8	0.0	1.6	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
DXP_synthase_N	PF13292.6	gi|429216420|ref|YP_007174410.1|	-	5.9e-07	29.0	0.2	2.7e-05	23.5	0.1	2.2	2	0	0	2	2	2	1	1-deoxy-D-xylulose-5-phosphate	synthase
XFP_N	PF09364.10	gi|429216420|ref|YP_007174410.1|	-	0.00099	18.0	0.0	0.0017	17.3	0.0	1.3	1	0	0	1	1	1	1	XFP	N-terminal	domain
PRMT5	PF05185.16	gi|429216420|ref|YP_007174410.1|	-	0.01	15.7	0.0	0.041	13.7	0.0	2.0	1	0	0	1	1	1	0	PRMT5	arginine-N-methyltransferase
Activator-TraM	PF11657.8	gi|429216420|ref|YP_007174410.1|	-	9.6	6.0	6.1	2.1	8.2	0.8	2.4	3	0	0	3	3	3	0	Transcriptional	activator	TraM
2-Hacid_dh_C	PF02826.19	gi|429216421|ref|YP_007174411.1|	-	1.9e-58	196.7	0.1	4.2e-58	195.6	0.0	1.5	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.30	gi|429216421|ref|YP_007174411.1|	-	6.7e-24	84.1	0.0	7.9e-24	83.8	0.0	1.0	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
NAD_binding_2	PF03446.15	gi|429216421|ref|YP_007174411.1|	-	4.8e-07	30.1	0.1	1.1e-06	29.0	0.0	1.5	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
TrkA_N	PF02254.18	gi|429216421|ref|YP_007174411.1|	-	0.027	14.7	0.0	0.085	13.1	0.0	1.8	1	0	0	1	1	1	0	TrkA-N	domain
F420_oxidored	PF03807.17	gi|429216421|ref|YP_007174411.1|	-	0.035	14.7	0.0	0.24	12.0	0.0	2.4	2	1	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
Shikimate_DH	PF01488.20	gi|429216421|ref|YP_007174411.1|	-	0.083	12.9	0.2	5.3	7.1	0.0	2.6	2	1	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
Gp_dh_N	PF00044.24	gi|429216421|ref|YP_007174411.1|	-	0.11	12.8	0.0	6.5	7.2	0.0	2.5	2	0	0	2	2	2	0	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
ThiF	PF00899.21	gi|429216421|ref|YP_007174411.1|	-	0.11	11.8	0.5	2.1	7.6	0.0	2.6	1	1	1	3	3	3	0	ThiF	family
AhpC-TSA	PF00578.21	gi|429216422|ref|YP_007174412.1|	-	1.8e-32	111.9	0.0	2.1e-32	111.7	0.0	1.0	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.10	gi|429216422|ref|YP_007174412.1|	-	5.7e-20	71.5	0.0	6.7e-20	71.3	0.0	1.0	1	0	0	1	1	1	1	Redoxin
SCO1-SenC	PF02630.14	gi|429216422|ref|YP_007174412.1|	-	0.018	15.0	0.0	0.05	13.5	0.0	1.7	1	1	0	1	1	1	0	SCO1/SenC
AA_permease	PF00324.21	gi|429216423|ref|YP_007174413.1|	-	1.5e-25	89.8	45.1	1.8e-25	89.5	45.1	1.0	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease_2	PF13520.6	gi|429216423|ref|YP_007174413.1|	-	1.2e-24	86.9	53.8	2.4e-24	85.9	53.8	1.4	1	1	0	1	1	1	1	Amino	acid	permease
Phage_TAC_9	PF10876.8	gi|429216423|ref|YP_007174413.1|	-	0.099	12.7	0.0	0.2	11.8	0.0	1.4	1	0	0	1	1	1	0	Phage	tail	assemb.y	chaperone	protein,	TAC
EBV-NA1	PF02905.14	gi|429216423|ref|YP_007174413.1|	-	0.11	12.3	0.2	0.25	11.1	0.0	1.6	2	0	0	2	2	2	0	Epstein	Barr	virus	nuclear	antigen-1,	DNA-binding	domain
TusA	PF01206.17	gi|429216424|ref|YP_007174414.1|	-	2.2e-17	62.6	0.1	2.5e-17	62.5	0.1	1.0	1	0	0	1	1	1	1	Sulfurtransferase	TusA
Peptidase_M20	PF01546.28	gi|429216425|ref|YP_007174415.1|	-	3.8e-34	118.2	0.0	4.9e-34	117.9	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.14	gi|429216425|ref|YP_007174415.1|	-	1.1e-16	60.7	0.0	2.4e-16	59.6	0.0	1.6	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Peptidase_S58	PF03576.14	gi|429216426|ref|YP_007174416.1|	-	5.4e-28	98.4	0.3	7e-28	98.0	0.3	1.0	1	0	0	1	1	1	1	Peptidase	family	S58
DUF3782	PF12644.7	gi|429216427|ref|YP_007174417.1|	-	1.1e-26	92.7	0.6	1.1e-26	92.7	0.6	2.9	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF3782)
PDDEXK_10	PF07788.11	gi|429216427|ref|YP_007174417.1|	-	2.9e-15	55.9	0.0	5.3e-15	55.1	0.0	1.5	1	0	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
DUF2959	PF11172.8	gi|429216427|ref|YP_007174417.1|	-	1.1e-05	25.7	4.0	0.0058	16.8	0.6	2.3	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF2959)
Atg14	PF10186.9	gi|429216427|ref|YP_007174417.1|	-	2e-05	23.8	7.7	2.8e-05	23.4	7.7	1.2	1	0	0	1	1	1	1	Vacuolar	sorting	38	and	autophagy-related	subunit	14
Fez1	PF06818.15	gi|429216427|ref|YP_007174417.1|	-	0.00012	22.6	7.1	0.00016	22.2	7.1	1.2	1	0	0	1	1	1	1	Fez1
FapA	PF03961.13	gi|429216427|ref|YP_007174417.1|	-	0.00027	19.7	7.7	0.00033	19.4	7.7	1.2	1	0	0	1	1	1	1	Flagellar	Assembly	Protein	A
LPP	PF04728.13	gi|429216427|ref|YP_007174417.1|	-	0.00064	20.1	2.7	0.13	12.7	0.4	2.5	1	1	1	2	2	2	2	Lipoprotein	leucine-zipper
V_ATPase_I	PF01496.19	gi|429216427|ref|YP_007174417.1|	-	0.00081	17.5	1.8	0.00096	17.2	1.8	1.1	1	0	0	1	1	1	1	V-type	ATPase	116kDa	subunit	family
Mod_r	PF07200.13	gi|429216427|ref|YP_007174417.1|	-	0.00082	19.5	9.3	0.049	13.7	10.9	2.0	1	1	1	2	2	2	1	Modifier	of	rudimentary	(Mod(r))	protein
Sec34	PF04136.15	gi|429216427|ref|YP_007174417.1|	-	0.0013	18.7	7.2	0.0054	16.6	3.8	2.1	1	1	1	2	2	2	2	Sec34-like	family
DUF948	PF06103.11	gi|429216427|ref|YP_007174417.1|	-	0.0019	18.4	6.2	0.031	14.5	6.2	2.4	1	1	1	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF948)
UPF0242	PF06785.11	gi|429216427|ref|YP_007174417.1|	-	0.0032	17.6	7.8	0.0053	16.9	7.8	1.5	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0242)	N-terminus
HOOK	PF05622.12	gi|429216427|ref|YP_007174417.1|	-	0.0077	14.5	9.0	0.012	13.8	9.0	1.3	1	0	0	1	1	1	1	HOOK	protein
Spc7	PF08317.11	gi|429216427|ref|YP_007174417.1|	-	0.0079	15.1	8.7	0.011	14.7	8.7	1.3	1	0	0	1	1	1	1	Spc7	kinetochore	protein
DUF1640	PF07798.11	gi|429216427|ref|YP_007174417.1|	-	0.01	15.9	14.1	0.14	12.2	14.1	2.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1640)
USP8_interact	PF08941.10	gi|429216427|ref|YP_007174417.1|	-	0.012	15.4	3.3	0.014	15.2	2.5	1.6	1	1	0	1	1	1	0	USP8	interacting
ADIP	PF11559.8	gi|429216427|ref|YP_007174417.1|	-	0.014	15.5	9.4	0.022	14.9	9.4	1.3	1	0	0	1	1	1	0	Afadin-	and	alpha	-actinin-Binding
Syntaxin_2	PF14523.6	gi|429216427|ref|YP_007174417.1|	-	0.014	15.8	9.8	0.36	11.2	9.8	2.4	1	1	0	1	1	1	0	Syntaxin-like	protein
HMMR_C	PF15908.5	gi|429216427|ref|YP_007174417.1|	-	0.015	15.6	8.1	0.38	11.0	7.7	2.9	1	1	0	1	1	1	0	Hyaluronan	mediated	motility	receptor	C-terminal
Golgin_A5	PF09787.9	gi|429216427|ref|YP_007174417.1|	-	0.017	14.6	7.6	0.023	14.2	7.6	1.1	1	0	0	1	1	1	0	Golgin	subfamily	A	member	5
DUF16	PF01519.16	gi|429216427|ref|YP_007174417.1|	-	0.017	15.6	8.0	0.03	14.8	6.4	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	DUF16
ERM	PF00769.19	gi|429216427|ref|YP_007174417.1|	-	0.017	14.9	12.0	0.025	14.4	12.0	1.2	1	0	0	1	1	1	0	Ezrin/radixin/moesin	family
TerB	PF05099.13	gi|429216427|ref|YP_007174417.1|	-	0.018	15.0	0.6	2.6	8.0	0.1	2.4	1	1	1	2	2	2	0	Tellurite	resistance	protein	TerB
Seryl_tRNA_N	PF02403.22	gi|429216427|ref|YP_007174417.1|	-	0.021	15.1	12.0	0.082	13.1	11.4	2.2	1	1	1	2	2	2	0	Seryl-tRNA	synthetase	N-terminal	domain
APG6_N	PF17675.1	gi|429216427|ref|YP_007174417.1|	-	0.021	15.4	16.4	0.056	14.0	16.4	1.8	1	1	0	1	1	1	0	Apg6	coiled-coil	region
HAUS-augmin3	PF14932.6	gi|429216427|ref|YP_007174417.1|	-	0.021	14.4	7.6	0.033	13.8	7.6	1.2	1	0	0	1	1	1	0	HAUS	augmin-like	complex	subunit	3
TMPIT	PF07851.13	gi|429216427|ref|YP_007174417.1|	-	0.024	13.9	2.2	0.033	13.4	2.2	1.2	1	0	0	1	1	1	0	TMPIT-like	protein
DivIC	PF04977.15	gi|429216427|ref|YP_007174417.1|	-	0.033	14.0	17.6	0.52	10.1	6.3	3.6	1	1	2	3	3	3	0	Septum	formation	initiator
ZapB	PF06005.12	gi|429216427|ref|YP_007174417.1|	-	0.034	14.6	12.0	0.034	14.6	12.0	2.7	2	1	1	3	3	2	0	Cell	division	protein	ZapB
BRE1	PF08647.11	gi|429216427|ref|YP_007174417.1|	-	0.041	14.0	10.7	0.088	12.9	10.2	1.9	1	1	0	1	1	1	0	BRE1	E3	ubiquitin	ligase
DegS	PF05384.11	gi|429216427|ref|YP_007174417.1|	-	0.043	13.3	10.9	0.13	11.7	2.7	2.5	1	1	1	2	2	2	0	Sensor	protein	DegS
DUF4201	PF13870.6	gi|429216427|ref|YP_007174417.1|	-	0.043	13.5	15.3	0.12	12.1	15.3	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4201)
TPR_MLP1_2	PF07926.12	gi|429216427|ref|YP_007174417.1|	-	0.043	13.9	12.4	0.37	10.9	12.1	2.8	1	1	1	2	2	2	0	TPR/MLP1/MLP2-like	protein
zf-C4H2	PF10146.9	gi|429216427|ref|YP_007174417.1|	-	0.047	14.0	9.0	0.082	13.2	9.0	1.4	1	0	0	1	1	1	0	Zinc	finger-containing	protein
IFT46_B_C	PF12317.8	gi|429216427|ref|YP_007174417.1|	-	0.049	13.4	1.8	0.059	13.1	0.8	1.6	2	0	0	2	2	1	0	Intraflagellar	transport	complex	B	protein	46	C	terminal
Allexi_40kDa	PF05549.11	gi|429216427|ref|YP_007174417.1|	-	0.053	13.0	2.9	0.075	12.5	2.0	1.4	1	1	0	1	1	1	0	Allexivirus	40kDa	protein
DUF4156	PF13698.6	gi|429216427|ref|YP_007174417.1|	-	0.053	13.9	3.2	5.7	7.3	0.4	2.9	2	1	1	3	3	2	0	Domain	of	unknown	function	(DUF4156)
DUF3450	PF11932.8	gi|429216427|ref|YP_007174417.1|	-	0.057	12.7	7.0	0.093	12.0	7.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3450)
Phage_GPO	PF05929.11	gi|429216427|ref|YP_007174417.1|	-	0.06	13.0	0.5	0.086	12.5	0.5	1.2	1	0	0	1	1	1	0	Phage	capsid	scaffolding	protein	(GPO)	serine	peptidase
COG2	PF06148.11	gi|429216427|ref|YP_007174417.1|	-	0.062	13.4	8.3	0.11	12.6	7.5	1.8	1	1	1	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
DUF4763	PF15960.5	gi|429216427|ref|YP_007174417.1|	-	0.065	12.5	10.3	0.077	12.3	7.7	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4763)
TMF_TATA_bd	PF12325.8	gi|429216427|ref|YP_007174417.1|	-	0.066	13.4	17.2	1.8	8.8	11.2	2.6	1	1	1	2	2	2	0	TATA	element	modulatory	factor	1	TATA	binding
KASH_CCD	PF14662.6	gi|429216427|ref|YP_007174417.1|	-	0.071	12.9	17.2	0.18	11.6	16.4	2.0	1	1	0	1	1	1	0	Coiled-coil	region	of	CCDC155	or	KASH
Nup54	PF13874.6	gi|429216427|ref|YP_007174417.1|	-	0.072	13.2	5.8	0.12	12.5	5.8	1.3	1	0	0	1	1	1	0	Nucleoporin	complex	subunit	54
YabA	PF06156.13	gi|429216427|ref|YP_007174417.1|	-	0.081	13.6	18.7	0.3	11.7	8.3	3.0	1	1	2	3	3	3	0	Initiation	control	protein	YabA
NRBF2	PF08961.10	gi|429216427|ref|YP_007174417.1|	-	0.13	11.9	16.8	0.21	11.2	3.9	2.7	1	1	2	3	3	2	0	Nuclear	receptor-binding	factor	2,	autophagy	regulator
TolA_bind_tri	PF16331.5	gi|429216427|ref|YP_007174417.1|	-	0.16	12.0	11.4	1.8	8.7	3.9	2.8	1	1	1	2	2	2	0	TolA	binding	protein	trimerisation
FUSC	PF04632.12	gi|429216427|ref|YP_007174417.1|	-	0.17	10.4	0.2	0.2	10.2	0.2	1.0	1	0	0	1	1	1	0	Fusaric	acid	resistance	protein	family
Cep57_CLD_2	PF14197.6	gi|429216427|ref|YP_007174417.1|	-	0.19	11.9	17.7	65	3.7	17.7	3.0	1	1	0	1	1	1	0	Centrosome	localisation	domain	of	PPC89
DUF812	PF05667.11	gi|429216427|ref|YP_007174417.1|	-	0.2	10.5	9.2	0.27	10.1	9.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF812)
YscO	PF07321.12	gi|429216427|ref|YP_007174417.1|	-	0.22	11.4	11.8	0.46	10.4	11.6	1.7	1	1	0	1	1	1	0	Type	III	secretion	protein	YscO
5_nucleotid	PF05761.14	gi|429216427|ref|YP_007174417.1|	-	0.23	10.3	3.8	0.31	9.9	3.8	1.2	1	0	0	1	1	1	0	5'	nucleotidase	family
Macoilin	PF09726.9	gi|429216427|ref|YP_007174417.1|	-	0.24	9.9	6.3	0.31	9.5	6.3	1.1	1	0	0	1	1	1	0	Macoilin	family
DUF4709	PF15821.5	gi|429216427|ref|YP_007174417.1|	-	0.26	11.6	6.0	14	6.0	0.3	2.9	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF4709)
Hemagglutinin	PF00509.18	gi|429216427|ref|YP_007174417.1|	-	0.27	9.6	3.2	0.39	9.1	3.2	1.2	1	0	0	1	1	1	0	Haemagglutinin
Tup_N	PF08581.10	gi|429216427|ref|YP_007174417.1|	-	0.31	11.4	9.9	0.26	11.6	6.1	2.3	1	1	1	2	2	2	0	Tup	N-terminal
DUF2968	PF11180.8	gi|429216427|ref|YP_007174417.1|	-	0.32	10.6	6.2	0.47	10.0	6.2	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2968)
bZIP_1	PF00170.21	gi|429216427|ref|YP_007174417.1|	-	0.37	10.9	22.8	0.071	13.2	5.5	3.3	2	1	1	3	3	2	0	bZIP	transcription	factor
DUF4618	PF15397.6	gi|429216427|ref|YP_007174417.1|	-	0.39	10.1	12.1	1.5	8.2	4.8	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4618)
DUF2203	PF09969.9	gi|429216427|ref|YP_007174417.1|	-	0.41	11.4	7.0	1.5	9.6	7.0	2.0	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2203)
CENP-F_leu_zip	PF10473.9	gi|429216427|ref|YP_007174417.1|	-	0.45	10.5	18.3	1.1	9.3	13.8	2.2	1	1	1	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
RPW8	PF05659.11	gi|429216427|ref|YP_007174417.1|	-	0.47	10.1	9.5	2.6	7.7	1.3	2.4	1	1	1	2	2	2	0	Arabidopsis	broad-spectrum	mildew	resistance	protein	RPW8
HALZ	PF02183.18	gi|429216427|ref|YP_007174417.1|	-	0.47	10.7	15.7	3.3	8.0	4.4	3.6	2	1	2	4	4	3	0	Homeobox	associated	leucine	zipper
DUF1664	PF07889.12	gi|429216427|ref|YP_007174417.1|	-	0.53	10.3	6.8	1.1	9.4	6.5	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
DUF2730	PF10805.8	gi|429216427|ref|YP_007174417.1|	-	0.53	10.4	10.0	0.65	10.1	5.4	2.8	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2730)
SseC	PF04888.12	gi|429216427|ref|YP_007174417.1|	-	0.59	9.7	2.5	0.8	9.2	1.1	1.7	1	1	0	1	1	1	0	Secretion	system	effector	C	(SseC)	like	family
Vps51	PF08700.11	gi|429216427|ref|YP_007174417.1|	-	0.61	10.2	6.6	2.1	8.5	0.4	3.2	1	1	2	3	3	3	0	Vps51/Vps67
Rootletin	PF15035.6	gi|429216427|ref|YP_007174417.1|	-	0.72	9.8	14.8	5.5	7.0	14.8	2.1	1	1	0	1	1	1	0	Ciliary	rootlet	component,	centrosome	cohesion
S6OS1	PF15676.5	gi|429216427|ref|YP_007174417.1|	-	0.82	8.1	8.5	1.1	7.7	8.5	1.1	1	0	0	1	1	1	0	Six6	opposite	strand	transcript	1	family
SKA2	PF16740.5	gi|429216427|ref|YP_007174417.1|	-	0.95	9.3	10.0	6.6	6.6	2.8	2.6	1	1	1	2	2	2	0	Spindle	and	kinetochore-associated	protein	2
Sec20	PF03908.13	gi|429216427|ref|YP_007174417.1|	-	0.99	9.4	5.0	3.3	7.7	1.3	2.5	1	1	1	2	2	2	0	Sec20
DUF4795	PF16043.5	gi|429216427|ref|YP_007174417.1|	-	1	8.9	12.1	2.1	7.9	12.1	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4795)
Uso1_p115_C	PF04871.13	gi|429216427|ref|YP_007174417.1|	-	1.2	9.5	9.5	3	8.2	9.5	1.7	1	1	0	1	1	1	0	Uso1	/	p115	like	vesicle	tethering	protein,	C	terminal	region
Prominin	PF05478.11	gi|429216427|ref|YP_007174417.1|	-	1.3	6.9	7.1	2.2	6.1	6.7	1.4	1	1	0	1	1	1	0	Prominin
HAP1_N	PF04849.13	gi|429216427|ref|YP_007174417.1|	-	1.7	7.8	17.0	4.9	6.3	17.0	1.7	1	1	0	1	1	1	0	HAP1	N-terminal	conserved	region
Fib_alpha	PF08702.10	gi|429216427|ref|YP_007174417.1|	-	2	8.6	7.1	3.9	7.7	7.1	1.5	1	0	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
FNIP_M	PF14637.6	gi|429216427|ref|YP_007174417.1|	-	2.2	8.2	4.9	8.2	6.4	5.0	1.8	1	1	0	1	1	1	0	Folliculin-interacting	protein	middle	domain
BLOC1_2	PF10046.9	gi|429216427|ref|YP_007174417.1|	-	2.3	8.6	13.1	10	6.5	8.4	2.7	1	1	1	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Prp19	PF08606.11	gi|429216427|ref|YP_007174417.1|	-	2.3	8.3	6.9	15	5.7	0.3	3.5	2	1	2	4	4	3	0	Prp19/Pso4-like
JIP_LZII	PF16471.5	gi|429216427|ref|YP_007174417.1|	-	2.5	8.4	23.2	0.88	9.8	13.5	2.7	1	1	1	2	2	2	0	JNK-interacting	protein	leucine	zipper	II
HAUS6_N	PF14661.6	gi|429216427|ref|YP_007174417.1|	-	2.7	7.5	7.8	8	6.0	7.9	1.7	1	1	0	1	1	1	0	HAUS	augmin-like	complex	subunit	6	N-terminus
DUF4446	PF14584.6	gi|429216427|ref|YP_007174417.1|	-	3	7.8	8.0	4.6	7.2	4.3	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4446)
SlyX	PF04102.12	gi|429216427|ref|YP_007174417.1|	-	6.3	7.5	7.4	21	5.8	1.7	2.9	2	1	1	3	3	2	0	SlyX
CASP_C	PF08172.12	gi|429216427|ref|YP_007174417.1|	-	7.2	5.9	14.8	5.1	6.4	2.6	3.0	1	1	2	3	3	3	0	CASP	C	terminal
CENP-H	PF05837.12	gi|429216427|ref|YP_007174417.1|	-	7.3	7.0	14.4	26	5.3	13.4	2.2	1	1	1	2	2	2	0	Centromere	protein	H	(CENP-H)
K-box	PF01486.17	gi|429216427|ref|YP_007174417.1|	-	9.9	6.4	19.0	6.2	7.1	2.7	2.8	1	1	1	2	2	2	0	K-box	region
Fungal_TACC	PF12709.7	gi|429216427|ref|YP_007174417.1|	-	9.9	6.7	10.8	17	6.0	6.3	3.0	1	1	2	3	3	2	0	Fungal	Transforming	acidic	coiled-coil	(TACC)	proteins
MFS_1	PF07690.16	gi|429216428|ref|YP_007174418.1|	-	4.7e-27	94.8	56.5	3.1e-13	49.4	27.5	2.4	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.24	gi|429216428|ref|YP_007174418.1|	-	1.8e-21	76.5	43.5	1e-15	57.6	11.9	2.0	1	1	1	2	2	2	2	Sugar	(and	other)	transporter
MFS_1_like	PF12832.7	gi|429216428|ref|YP_007174418.1|	-	3.4e-07	29.5	23.7	4.2e-07	29.2	15.5	2.9	1	1	2	3	3	3	2	MFS_1	like	family
Aldedh	PF00171.22	gi|429216429|ref|YP_007174419.1|	-	2.4e-138	461.5	0.0	2.7e-138	461.3	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
ApoLp-III	PF07464.11	gi|429216429|ref|YP_007174419.1|	-	0.1	12.7	0.1	0.24	11.5	0.1	1.7	1	0	0	1	1	1	0	Apolipophorin-III	precursor	(apoLp-III)
Aminotran_3	PF00202.21	gi|429216430|ref|YP_007174420.1|	-	9.1e-100	334.2	0.0	1.1e-99	333.9	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
Phi-29_GP3	PF05435.11	gi|429216430|ref|YP_007174420.1|	-	0.014	14.9	0.0	0.032	13.7	0.0	1.5	1	0	0	1	1	1	0	Phi-29	DNA	terminal	protein	GP3
ABC2_membrane_2	PF12679.7	gi|429216431|ref|YP_007174421.1|	-	4.7e-06	26.1	29.2	7.8e-06	25.4	29.2	1.4	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.7	gi|429216431|ref|YP_007174421.1|	-	0.0016	18.4	9.6	0.0016	18.4	9.6	2.9	2	1	1	3	3	3	1	ABC-2	family	transporter	protein
ABC2_membrane_5	PF13346.6	gi|429216431|ref|YP_007174421.1|	-	0.0058	16.2	30.5	0.0058	16.2	30.5	2.6	2	1	0	2	2	2	1	ABC-2	family	transporter	protein
TPR_2	PF07719.17	gi|429216432|ref|YP_007174422.1|	-	3.3e-10	39.3	4.2	0.00059	19.8	0.4	3.2	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|429216432|ref|YP_007174422.1|	-	3.8e-09	36.0	3.8	0.0015	18.3	0.0	3.4	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|429216432|ref|YP_007174422.1|	-	2.3e-07	31.0	1.5	0.024	15.3	0.0	4.3	3	1	1	4	4	4	2	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|429216432|ref|YP_007174422.1|	-	2.7e-07	30.3	6.4	0.099	12.9	0.1	3.8	2	1	0	3	3	3	3	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|429216432|ref|YP_007174422.1|	-	2.7e-05	24.4	1.5	0.036	14.4	0.2	3.0	1	1	0	3	3	3	2	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|429216432|ref|YP_007174422.1|	-	0.00011	22.8	0.1	0.012	16.2	0.0	2.3	1	1	2	3	3	3	2	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|429216432|ref|YP_007174422.1|	-	0.00024	21.7	0.0	0.78	10.7	0.0	2.6	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_17	PF13431.6	gi|429216432|ref|YP_007174422.1|	-	0.00039	20.6	0.0	0.066	13.6	0.0	2.9	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TPR_11	PF13414.6	gi|429216432|ref|YP_007174422.1|	-	0.0038	16.9	1.1	6.5	6.5	0.0	3.1	3	0	0	3	3	3	2	TPR	repeat
TPR_19	PF14559.6	gi|429216432|ref|YP_007174422.1|	-	0.011	16.2	0.1	0.5	10.9	0.0	2.3	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_15	PF13429.6	gi|429216432|ref|YP_007174422.1|	-	0.012	14.9	0.0	0.79	8.9	0.0	2.0	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_7	PF13176.6	gi|429216432|ref|YP_007174422.1|	-	0.021	14.8	0.0	6.2	7.1	0.0	2.7	2	0	0	2	2	2	0	Tetratricopeptide	repeat
DUF2225	PF09986.9	gi|429216432|ref|YP_007174422.1|	-	0.029	14.1	2.3	0.045	13.5	2.2	1.4	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2225)
ANAPC3	PF12895.7	gi|429216432|ref|YP_007174422.1|	-	0.069	13.4	1.3	0.32	11.2	0.3	2.2	1	1	1	2	2	2	0	Anaphase-promoting	complex,	cyclosome,	subunit	3
Peripla_BP_2	PF01497.18	gi|429216433|ref|YP_007174423.1|	-	1.4e-29	103.4	0.0	1.8e-29	103.0	0.0	1.1	1	0	0	1	1	1	1	Periplasmic	binding	protein
Reticulon	PF02453.17	gi|429216433|ref|YP_007174423.1|	-	0.6	10.1	5.1	1.2	9.1	5.1	1.4	1	0	0	1	1	1	0	Reticulon
Haem_degrading	PF03928.14	gi|429216434|ref|YP_007174424.1|	-	1.1e-40	138.4	0.0	7.1e-22	77.7	0.0	2.0	2	0	0	2	2	2	2	Haem-degrading
DAO	PF01266.24	gi|429216435|ref|YP_007174425.1|	-	6.5e-49	167.4	0.0	7.4e-49	167.2	0.0	1.0	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.14	gi|429216435|ref|YP_007174425.1|	-	5.2e-13	48.9	0.0	4.6e-06	26.1	0.0	2.2	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|429216435|ref|YP_007174425.1|	-	3.3e-11	43.0	1.8	2.7e-05	23.6	0.0	2.5	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.6	gi|429216435|ref|YP_007174425.1|	-	8.2e-10	38.8	0.0	2.1e-09	37.5	0.0	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox	PF00070.27	gi|429216435|ref|YP_007174425.1|	-	2.9e-08	34.2	0.5	0.00071	20.1	0.1	3.0	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.14	gi|429216435|ref|YP_007174425.1|	-	6.9e-08	31.6	0.4	0.00025	19.9	0.2	2.2	2	0	0	2	2	2	2	HI0933-like	protein
FAD_binding_3	PF01494.19	gi|429216435|ref|YP_007174425.1|	-	2.3e-06	27.1	0.1	1.4e-05	24.5	0.1	2.0	2	0	0	2	2	2	1	FAD	binding	domain
FAD_binding_2	PF00890.24	gi|429216435|ref|YP_007174425.1|	-	3.6e-06	26.3	0.2	8.2e-06	25.1	0.1	1.6	2	0	0	2	2	2	1	FAD	binding	domain
Lycopene_cycl	PF05834.12	gi|429216435|ref|YP_007174425.1|	-	4.7e-06	25.9	0.1	0.00013	21.1	0.1	2.1	2	0	0	2	2	2	1	Lycopene	cyclase	protein
Thi4	PF01946.17	gi|429216435|ref|YP_007174425.1|	-	0.00031	20.1	0.3	0.00067	19.0	0.3	1.6	1	0	0	1	1	1	1	Thi4	family
Amino_oxidase	PF01593.24	gi|429216435|ref|YP_007174425.1|	-	0.0013	18.2	0.0	1.1	8.4	0.0	2.2	2	0	0	2	2	2	2	Flavin	containing	amine	oxidoreductase
GIDA	PF01134.22	gi|429216435|ref|YP_007174425.1|	-	0.0015	17.7	0.1	0.0024	17.0	0.1	1.3	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
TrkA_N	PF02254.18	gi|429216435|ref|YP_007174425.1|	-	0.0021	18.3	0.1	0.0042	17.3	0.1	1.5	1	0	0	1	1	1	1	TrkA-N	domain
FAD_oxidored	PF12831.7	gi|429216435|ref|YP_007174425.1|	-	0.0024	17.3	0.1	0.14	11.5	0.1	2.2	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Trp_halogenase	PF04820.14	gi|429216435|ref|YP_007174425.1|	-	0.0048	15.8	0.4	0.052	12.4	0.2	2.1	2	0	0	2	2	2	1	Tryptophan	halogenase
NAD_binding_9	PF13454.6	gi|429216435|ref|YP_007174425.1|	-	0.013	15.5	0.0	0.07	13.1	0.0	2.0	2	0	0	2	2	2	0	FAD-NAD(P)-binding
AlaDh_PNT_C	PF01262.21	gi|429216435|ref|YP_007174425.1|	-	0.11	11.8	0.1	0.27	10.5	0.1	1.6	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
Mqo	PF06039.15	gi|429216435|ref|YP_007174425.1|	-	0.12	10.9	0.3	0.69	8.4	0.1	1.9	2	0	0	2	2	2	0	Malate:quinone	oxidoreductase	(Mqo)
AMP-binding	PF00501.28	gi|429216436|ref|YP_007174426.1|	-	3.8e-93	312.4	0.0	4.8e-93	312.1	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.6	gi|429216436|ref|YP_007174426.1|	-	1.7e-22	80.1	0.4	4e-22	79.0	0.4	1.7	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
DUF996	PF06195.13	gi|429216437|ref|YP_007174427.1|	-	2.9e-20	72.9	25.8	1.3e-18	67.5	23.1	3.1	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF996)
TMEM43	PF07787.12	gi|429216437|ref|YP_007174427.1|	-	0.044	13.2	1.8	0.078	12.3	0.6	1.9	2	0	0	2	2	2	0	Transmembrane	protein	43
Keratin_assoc	PF09775.9	gi|429216437|ref|YP_007174427.1|	-	0.071	12.8	6.3	0.14	11.8	6.3	1.5	1	0	0	1	1	1	0	Keratinocyte-associated	protein	2
DMT_YdcZ	PF04657.13	gi|429216437|ref|YP_007174427.1|	-	0.16	12.3	10.6	0.062	13.6	6.6	2.1	1	1	1	2	2	2	0	Putative	inner	membrane	exporter,	YdcZ
DUF2157	PF09925.9	gi|429216437|ref|YP_007174427.1|	-	0.33	10.7	4.6	17	5.2	4.6	2.4	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2157)
Claudin_2	PF13903.6	gi|429216437|ref|YP_007174427.1|	-	0.87	9.3	9.6	0.31	10.8	4.6	2.3	1	1	1	2	2	2	0	PMP-22/EMP/MP20/Claudin	tight	junction
DUF4271	PF14093.6	gi|429216437|ref|YP_007174427.1|	-	1	9.2	24.4	0.55	10.1	19.0	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4271)
Phage_holin_3_6	PF07332.11	gi|429216437|ref|YP_007174427.1|	-	5.5	7.1	16.7	1.5e+04	-4.0	16.7	2.8	1	1	0	1	1	1	0	Putative	Actinobacterial	Holin-X,	holin	superfamily	III
DUF87	PF01935.17	gi|429216438|ref|YP_007174428.1|	-	9.9e-15	55.2	1.0	9.8e-14	52.0	1.0	2.3	1	1	0	1	1	1	1	Helicase	HerA,	central	domain
DUF853	PF05872.12	gi|429216438|ref|YP_007174428.1|	-	3.7e-12	45.6	0.0	7.3e-06	24.8	0.0	2.2	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
AAA	PF00004.29	gi|429216438|ref|YP_007174428.1|	-	1e-07	32.4	0.2	0.0021	18.5	0.0	2.4	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
TrwB_AAD_bind	PF10412.9	gi|429216438|ref|YP_007174428.1|	-	7.4e-06	25.1	0.1	1.3e-05	24.4	0.1	1.3	1	0	0	1	1	1	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
FtsK_SpoIIIE	PF01580.18	gi|429216438|ref|YP_007174428.1|	-	0.00013	21.5	0.5	0.0025	17.2	0.1	2.3	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
ResIII	PF04851.15	gi|429216438|ref|YP_007174428.1|	-	0.00017	21.6	0.9	0.21	11.6	0.1	2.5	2	1	0	2	2	2	2	Type	III	restriction	enzyme,	res	subunit
ABC_tran	PF00005.27	gi|429216438|ref|YP_007174428.1|	-	0.0079	16.7	0.6	0.022	15.3	0.6	1.8	1	1	0	1	1	1	1	ABC	transporter
NACHT	PF05729.12	gi|429216438|ref|YP_007174428.1|	-	0.009	15.9	0.4	3	7.7	0.2	2.3	2	0	0	2	2	2	2	NACHT	domain
AAA_10	PF12846.7	gi|429216438|ref|YP_007174428.1|	-	0.01	14.8	0.1	1.7	7.5	0.0	2.2	2	0	0	2	2	2	0	AAA-like	domain
AAA_22	PF13401.6	gi|429216438|ref|YP_007174428.1|	-	0.016	15.4	0.0	0.83	9.9	0.0	2.5	2	1	0	2	2	2	0	AAA	domain
DEAD	PF00270.29	gi|429216438|ref|YP_007174428.1|	-	0.027	14.2	0.0	8.9	6.0	0.0	2.4	2	0	0	2	2	2	0	DEAD/DEAH	box	helicase
AAA_18	PF13238.6	gi|429216438|ref|YP_007174428.1|	-	0.069	13.7	0.0	0.36	11.4	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
AAA_23	PF13476.6	gi|429216438|ref|YP_007174428.1|	-	0.083	13.4	1.9	0.8	10.2	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
AvrLm4-7	PF18661.1	gi|429216438|ref|YP_007174428.1|	-	0.11	13.5	0.1	0.19	12.8	0.1	1.3	1	0	0	1	1	1	0	Avirulence	Effector	AvrLm4-7
DUF2075	PF09848.9	gi|429216438|ref|YP_007174428.1|	-	0.12	11.6	0.0	5.5	6.1	0.0	2.2	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
T2SSE	PF00437.20	gi|429216438|ref|YP_007174428.1|	-	0.13	11.3	0.1	0.26	10.3	0.1	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
cobW	PF02492.19	gi|429216438|ref|YP_007174428.1|	-	0.15	11.6	0.2	0.42	10.2	0.1	1.8	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
NurA	PF09376.10	gi|429216439|ref|YP_007174429.1|	-	2e-12	47.3	2.0	3.2e-12	46.6	2.0	1.2	1	0	0	1	1	1	1	NurA	domain
MMPL	PF03176.15	gi|429216440|ref|YP_007174430.1|	-	9.9e-56	189.1	27.6	3.3e-29	101.9	5.2	2.4	2	1	1	3	3	3	2	MMPL	family
DUF917	PF06032.12	gi|429216442|ref|YP_007174432.1|	-	3.7e-96	322.0	0.0	4.2e-96	321.8	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF917)
SBP_bac_5	PF00496.22	gi|429216444|ref|YP_007174434.1|	-	5e-47	160.7	5.2	8.7e-47	159.9	5.2	1.4	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
Flavokinase	PF01687.17	gi|429216444|ref|YP_007174434.1|	-	0.063	13.6	0.6	1.5	9.2	0.0	3.1	3	0	0	3	3	3	0	Riboflavin	kinase
SurA_N_3	PF13624.6	gi|429216444|ref|YP_007174434.1|	-	0.23	11.2	0.8	0.42	10.4	0.8	1.4	1	0	0	1	1	1	0	SurA	N-terminal	domain
Shisa	PF13908.6	gi|429216444|ref|YP_007174434.1|	-	0.69	10.1	6.6	1.3	9.2	6.6	1.3	1	0	0	1	1	1	0	Wnt	and	FGF	inhibitory	regulator
PKD	PF00801.20	gi|429216444|ref|YP_007174434.1|	-	1.7	8.6	0.0	1.7	8.6	0.0	3.9	4	0	0	4	4	4	0	PKD	domain
Mucin	PF01456.17	gi|429216444|ref|YP_007174434.1|	-	4.6	7.2	29.0	12	5.8	29.0	1.7	1	0	0	1	1	1	0	Mucin-like	glycoprotein
NurA	PF09376.10	gi|429216445|ref|YP_007174435.1|	-	1.5e-10	41.2	2.6	2.1e-10	40.7	2.0	1.6	1	1	0	1	1	1	1	NurA	domain
DUF87	PF01935.17	gi|429216446|ref|YP_007174436.1|	-	2.5e-11	44.1	5.1	5.2e-10	39.8	0.0	3.4	3	1	1	4	4	3	1	Helicase	HerA,	central	domain
FtsK_SpoIIIE	PF01580.18	gi|429216446|ref|YP_007174436.1|	-	1.6e-09	37.5	0.3	2.4e-06	27.1	0.1	2.3	2	0	0	2	2	2	2	FtsK/SpoIIIE	family
DUF853	PF05872.12	gi|429216446|ref|YP_007174436.1|	-	5.1e-09	35.3	0.1	3.4e-05	22.6	0.0	2.2	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
TrwB_AAD_bind	PF10412.9	gi|429216446|ref|YP_007174436.1|	-	5.1e-07	29.0	0.1	4.4e-06	25.8	0.0	2.1	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA	PF00004.29	gi|429216446|ref|YP_007174436.1|	-	1e-06	29.2	0.1	0.0057	17.1	0.1	3.0	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.6	gi|429216446|ref|YP_007174436.1|	-	1.8e-06	28.3	0.1	0.013	15.8	0.0	3.5	2	1	1	3	3	3	1	AAA	domain
ResIII	PF04851.15	gi|429216446|ref|YP_007174436.1|	-	5.3e-06	26.5	0.1	0.11	12.5	0.0	2.9	3	0	0	3	3	2	2	Type	III	restriction	enzyme,	res	subunit
G-alpha	PF00503.20	gi|429216446|ref|YP_007174436.1|	-	0.00012	21.3	3.1	0.00014	21.2	0.4	2.1	1	1	0	2	2	2	1	G-protein	alpha	subunit
T2SSE	PF00437.20	gi|429216446|ref|YP_007174436.1|	-	0.00031	19.9	0.1	0.002	17.3	0.0	2.1	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
DEAD	PF00270.29	gi|429216446|ref|YP_007174436.1|	-	0.0016	18.2	0.0	1.7	8.3	0.0	2.6	2	0	0	2	2	2	2	DEAD/DEAH	box	helicase
SWI2_SNF2	PF18766.1	gi|429216446|ref|YP_007174436.1|	-	0.0017	18.1	0.1	1	9.0	0.0	2.5	2	0	0	2	2	2	1	SWI2/SNF2	ATPase
Zot	PF05707.12	gi|429216446|ref|YP_007174436.1|	-	0.0024	17.6	0.1	0.0064	16.2	0.1	1.7	1	0	0	1	1	1	1	Zonular	occludens	toxin	(Zot)
AAA_23	PF13476.6	gi|429216446|ref|YP_007174436.1|	-	0.0031	18.0	0.6	0.0031	18.0	0.6	2.8	3	1	0	3	3	3	1	AAA	domain
AAA_19	PF13245.6	gi|429216446|ref|YP_007174436.1|	-	0.0079	16.5	0.1	0.032	14.5	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_7	PF12775.7	gi|429216446|ref|YP_007174436.1|	-	0.0088	15.6	0.0	0.023	14.2	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	dynein	motor	region
Pox_A32	PF04665.12	gi|429216446|ref|YP_007174436.1|	-	0.0093	15.4	0.0	0.024	14.1	0.0	1.6	1	0	0	1	1	1	1	Poxvirus	A32	protein
cobW	PF02492.19	gi|429216446|ref|YP_007174436.1|	-	0.0096	15.5	0.3	0.026	14.1	0.0	1.9	2	0	0	2	2	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_29	PF13555.6	gi|429216446|ref|YP_007174436.1|	-	0.013	15.3	0.0	0.03	14.1	0.0	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
DUF2075	PF09848.9	gi|429216446|ref|YP_007174436.1|	-	0.014	14.7	0.1	0.93	8.7	0.0	2.4	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_14	PF13173.6	gi|429216446|ref|YP_007174436.1|	-	0.014	15.4	3.8	0.035	14.1	0.1	3.0	3	0	0	3	3	3	0	AAA	domain
AAA_18	PF13238.6	gi|429216446|ref|YP_007174436.1|	-	0.014	15.9	0.0	0.047	14.2	0.0	2.0	1	0	0	1	1	1	0	AAA	domain
ABC_tran	PF00005.27	gi|429216446|ref|YP_007174436.1|	-	0.015	15.8	3.1	0.016	15.8	0.8	2.2	2	1	0	2	2	2	0	ABC	transporter
AAA_25	PF13481.6	gi|429216446|ref|YP_007174436.1|	-	0.015	14.9	0.0	6.1	6.4	0.0	2.5	2	0	0	2	2	2	0	AAA	domain
SNF2_N	PF00176.23	gi|429216446|ref|YP_007174436.1|	-	0.028	13.1	0.6	0.056	12.2	0.2	1.6	2	0	0	2	2	2	0	SNF2	family	N-terminal	domain
NACHT	PF05729.12	gi|429216446|ref|YP_007174436.1|	-	0.03	14.3	0.0	0.13	12.2	0.0	2.3	2	0	0	2	2	2	0	NACHT	domain
AAA_24	PF13479.6	gi|429216446|ref|YP_007174436.1|	-	0.032	14.0	0.0	0.072	12.8	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_30	PF13604.6	gi|429216446|ref|YP_007174436.1|	-	0.039	13.7	0.0	2.4	7.8	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
Roc	PF08477.13	gi|429216446|ref|YP_007174436.1|	-	0.044	14.0	0.0	0.12	12.6	0.0	1.7	1	0	0	1	1	1	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
RNA_helicase	PF00910.22	gi|429216446|ref|YP_007174436.1|	-	0.056	13.8	0.0	0.24	11.8	0.0	2.1	2	0	0	2	2	1	0	RNA	helicase
MobB	PF03205.14	gi|429216446|ref|YP_007174436.1|	-	0.075	12.9	0.0	0.17	11.8	0.0	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
TniB	PF05621.11	gi|429216446|ref|YP_007174436.1|	-	0.09	12.2	0.1	4.4	6.7	0.0	2.6	2	0	0	2	2	2	0	Bacterial	TniB	protein
Mg_chelatase	PF01078.21	gi|429216446|ref|YP_007174436.1|	-	0.1	11.9	0.1	0.2	11.0	0.1	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
MMR_HSR1	PF01926.23	gi|429216446|ref|YP_007174436.1|	-	0.11	12.6	1.8	1.4	9.0	0.5	3.1	2	1	0	2	2	2	0	50S	ribosome-binding	GTPase
AAA_28	PF13521.6	gi|429216446|ref|YP_007174436.1|	-	0.11	12.7	0.0	0.31	11.3	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
Viral_helicase1	PF01443.18	gi|429216446|ref|YP_007174436.1|	-	0.12	12.1	0.0	0.36	10.5	0.0	1.9	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
SRP54	PF00448.22	gi|429216446|ref|YP_007174436.1|	-	0.12	12.0	0.0	0.28	10.8	0.0	1.6	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA_16	PF13191.6	gi|429216446|ref|YP_007174436.1|	-	0.13	12.7	0.0	0.63	10.4	0.0	2.1	2	0	0	2	2	2	0	AAA	ATPase	domain
UvrD-helicase	PF00580.21	gi|429216446|ref|YP_007174436.1|	-	0.16	11.4	2.1	0.33	10.4	0.0	2.4	2	1	1	3	3	3	0	UvrD/REP	helicase	N-terminal	domain
Cnn_1N	PF07989.11	gi|429216446|ref|YP_007174436.1|	-	0.51	10.5	5.6	0.45	10.7	0.2	3.0	2	0	0	2	2	2	0	Centrosomin	N-terminal	motif	1
XhlA	PF10779.9	gi|429216446|ref|YP_007174436.1|	-	1	9.6	7.7	1.8	8.8	2.9	3.3	3	0	0	3	3	3	0	Haemolysin	XhlA
Cob_adeno_trans	PF01923.18	gi|429216447|ref|YP_007174437.1|	-	1.9e-43	148.4	0.0	2.2e-43	148.3	0.0	1.0	1	0	0	1	1	1	1	Cobalamin	adenosyltransferase
DUF1940	PF09155.10	gi|429216447|ref|YP_007174437.1|	-	0.061	13.4	0.0	0.27	11.3	0.0	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1940)
Aldedh	PF00171.22	gi|429216448|ref|YP_007174438.1|	-	4.6e-39	134.2	0.0	6.7e-39	133.7	0.0	1.1	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
GCH_III	PF05165.12	gi|429216448|ref|YP_007174438.1|	-	0.069	12.4	0.4	0.64	9.2	0.1	2.2	2	1	0	2	2	2	0	GTP	cyclohydrolase	III
PCNA_N	PF00705.18	gi|429216449|ref|YP_007174439.1|	-	3.9e-15	55.7	0.2	2.6e-12	46.6	0.0	2.1	2	0	0	2	2	2	2	Proliferating	cell	nuclear	antigen,	N-terminal	domain
PCNA_C	PF02747.15	gi|429216449|ref|YP_007174439.1|	-	3.1e-11	43.5	0.3	3.6e-09	36.9	0.1	2.3	2	0	0	2	2	2	2	Proliferating	cell	nuclear	antigen,	C-terminal	domain
Rad1	PF02144.16	gi|429216449|ref|YP_007174439.1|	-	2.3e-06	26.9	0.3	0.00025	20.2	0.1	2.1	2	0	0	2	2	2	2	Repair	protein	Rad1/Rec1/Rad17
DNA_pol3_beta_2	PF02767.16	gi|429216449|ref|YP_007174439.1|	-	0.092	13.0	0.1	0.52	10.5	0.0	2.2	3	0	0	3	3	3	0	DNA	polymerase	III	beta	subunit,	central	domain
UbiA	PF01040.18	gi|429216450|ref|YP_007174440.1|	-	2.1e-44	151.7	15.3	2.6e-44	151.4	15.0	1.3	1	1	0	1	1	1	1	UbiA	prenyltransferase	family
DVL	PF08137.12	gi|429216451|ref|YP_007174441.1|	-	0.24	11.3	0.4	0.24	11.3	0.4	1.7	2	0	0	2	2	2	0	DVL	family
Sugar_tr	PF00083.24	gi|429216452|ref|YP_007174442.1|	-	3.6e-14	52.5	15.6	8.7e-11	41.3	1.1	2.6	2	0	0	2	2	2	2	Sugar	(and	other)	transporter
MFS_1	PF07690.16	gi|429216452|ref|YP_007174442.1|	-	1.1e-12	47.6	37.4	5.8e-10	38.6	11.8	2.2	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
TRI12	PF06609.13	gi|429216452|ref|YP_007174442.1|	-	0.0015	17.0	4.2	0.0015	17.0	4.2	2.0	1	1	1	2	2	2	1	Fungal	trichothecene	efflux	pump	(TRI12)
DHDPS	PF00701.22	gi|429216453|ref|YP_007174443.1|	-	3.8e-68	229.3	0.0	4.3e-68	229.1	0.0	1.0	1	0	0	1	1	1	1	Dihydrodipicolinate	synthetase	family
DAGK_cat	PF00781.24	gi|429216453|ref|YP_007174443.1|	-	0.016	14.8	0.0	0.04	13.5	0.0	1.7	2	0	0	2	2	2	0	Diacylglycerol	kinase	catalytic	domain
BRX_N	PF13713.6	gi|429216453|ref|YP_007174443.1|	-	0.98	9.2	3.1	7.6	6.4	0.9	2.3	2	0	0	2	2	2	0	Transcription	factor	BRX	N-terminal	domain
APG6_N	PF17675.1	gi|429216454|ref|YP_007174444.1|	-	0.044	14.3	1.1	0.058	13.9	1.1	1.3	1	1	0	1	1	1	0	Apg6	coiled-coil	region
Peptidase_M32	PF02074.15	gi|429216455|ref|YP_007174445.1|	-	1e-163	545.6	0.5	1.2e-163	545.5	0.5	1.0	1	0	0	1	1	1	1	Carboxypeptidase	Taq	(M32)	metallopeptidase
Acyl-CoA_dh_1	PF00441.24	gi|429216456|ref|YP_007174446.1|	-	2.3e-45	154.4	0.1	4e-45	153.7	0.1	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.16	gi|429216456|ref|YP_007174446.1|	-	3.2e-26	92.2	0.0	6.8e-26	91.1	0.0	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_M	PF02770.19	gi|429216456|ref|YP_007174446.1|	-	6.6e-24	83.9	0.0	1.2e-23	83.1	0.0	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.11	gi|429216456|ref|YP_007174446.1|	-	3.1e-15	56.6	0.0	2.2e-14	53.9	0.0	2.1	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
MazE_antitoxin	PF04014.18	gi|429216457|ref|YP_007174447.1|	-	1.1e-08	34.8	0.3	3.8e-08	33.1	0.0	2.1	2	0	0	2	2	2	1	Antidote-toxin	recognition	MazE,	bacterial	antitoxin
Intein_splicing	PF14890.6	gi|429216457|ref|YP_007174447.1|	-	0.15	12.0	0.1	0.48	10.4	0.1	1.8	1	0	0	1	1	1	0	Intein	splicing	domain
Radical_SAM	PF04055.21	gi|429216458|ref|YP_007174448.1|	-	9.7e-08	32.6	0.0	4.2e-06	27.2	0.0	2.3	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|429216458|ref|YP_007174448.1|	-	1.6e-06	28.2	0.0	3.5e-06	27.1	0.0	1.6	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.6	gi|429216458|ref|YP_007174448.1|	-	0.00037	20.8	0.0	0.00078	19.7	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Methyltransf_11	PF08241.12	gi|429216460|ref|YP_007174450.1|	-	4.7e-15	56.0	0.0	7.1e-15	55.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|429216460|ref|YP_007174450.1|	-	2.6e-12	47.3	0.0	4.5e-12	46.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|429216460|ref|YP_007174450.1|	-	4.7e-10	39.5	0.2	1.2e-09	38.1	0.1	1.8	1	1	1	2	2	2	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|429216460|ref|YP_007174450.1|	-	8.5e-09	35.1	0.0	1e-08	34.8	0.0	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_23	PF13489.6	gi|429216460|ref|YP_007174450.1|	-	2.6e-07	30.6	0.0	3.4e-07	30.2	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|429216460|ref|YP_007174450.1|	-	1.6e-06	28.8	0.0	2.8e-06	28.0	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
MetW	PF07021.12	gi|429216460|ref|YP_007174450.1|	-	0.0018	17.9	0.0	0.01	15.4	0.0	1.9	1	1	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
Methyltransf_18	PF12847.7	gi|429216460|ref|YP_007174450.1|	-	0.05	13.5	0.0	0.074	13.0	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
Carb_kinase	PF01256.17	gi|429216461|ref|YP_007174451.1|	-	8.8e-49	166.2	0.0	1.5e-48	165.4	0.0	1.4	1	0	0	1	1	1	1	Carbohydrate	kinase
YjeF_N	PF03853.15	gi|429216461|ref|YP_007174451.1|	-	3.3e-37	128.0	0.1	6.2e-37	127.1	0.1	1.4	1	0	0	1	1	1	1	YjeF-related	protein	N-terminus
HK	PF02110.15	gi|429216461|ref|YP_007174451.1|	-	0.039	13.4	0.1	0.075	12.4	0.1	1.4	1	0	0	1	1	1	0	Hydroxyethylthiazole	kinase	family
Phos_pyr_kin	PF08543.12	gi|429216461|ref|YP_007174451.1|	-	0.042	13.2	0.1	0.088	12.2	0.1	1.6	1	0	0	1	1	1	0	Phosphomethylpyrimidine	kinase
DUF5488	PF17590.2	gi|429216461|ref|YP_007174451.1|	-	0.17	11.6	0.0	1.5	8.6	0.0	2.2	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5488)
Ribosomal_S24e	PF01282.19	gi|429216462|ref|YP_007174452.1|	-	5.9e-19	67.8	0.2	8.9e-19	67.2	0.2	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S24e
DNTTIP1_dimer	PF18192.1	gi|429216462|ref|YP_007174452.1|	-	0.0091	16.3	0.0	0.017	15.4	0.0	1.4	1	0	0	1	1	1	1	DNTTIP1	dimerisation	domain
Ribosomal_S27	PF01599.19	gi|429216463|ref|YP_007174453.1|	-	3.1e-11	43.3	3.8	3.9e-11	42.9	3.8	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S27a
Zn_Tnp_IS1595	PF12760.7	gi|429216463|ref|YP_007174453.1|	-	4.3e-05	23.4	1.2	4.8e-05	23.2	1.2	1.2	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
Zn_ribbon_SprT	PF17283.2	gi|429216463|ref|YP_007174453.1|	-	0.00079	19.3	2.9	0.0011	18.8	2.9	1.3	1	0	0	1	1	1	1	SprT-like	zinc	ribbon	domain
RNA_POL_M_15KD	PF02150.16	gi|429216463|ref|YP_007174453.1|	-	0.014	15.2	2.0	0.034	14.0	2.0	1.6	1	1	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
OrfB_Zn_ribbon	PF07282.11	gi|429216463|ref|YP_007174453.1|	-	0.017	15.1	0.5	0.018	14.9	0.5	1.2	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
zf-C2HC5	PF06221.13	gi|429216463|ref|YP_007174453.1|	-	0.019	15.0	1.1	0.023	14.7	1.1	1.4	1	1	0	1	1	1	0	Putative	zinc	finger	motif,	C2HC5-type
FlhC	PF05280.11	gi|429216463|ref|YP_007174453.1|	-	0.022	14.5	0.2	0.022	14.5	0.2	1.1	1	0	0	1	1	1	0	Flagellar	transcriptional	activator	(FlhC)
PriA_CRR	PF18319.1	gi|429216463|ref|YP_007174453.1|	-	0.073	13.1	3.4	0.17	11.9	3.4	1.6	1	1	0	1	1	1	0	PriA	DNA	helicase	Cys-rich	region	(CRR)	domain
RecR	PF02132.15	gi|429216463|ref|YP_007174453.1|	-	0.12	11.9	0.9	0.18	11.4	0.9	1.4	1	1	0	1	1	1	0	RecR	protein
zf-ribbon_3	PF13248.6	gi|429216463|ref|YP_007174453.1|	-	0.31	10.5	0.5	0.31	10.5	0.5	2.1	2	0	0	2	2	2	0	zinc-ribbon	domain
Mu-like_Com	PF10122.9	gi|429216463|ref|YP_007174453.1|	-	2.2	7.8	5.9	1.6	8.3	3.8	1.8	1	1	1	2	2	2	0	Mu-like	prophage	protein	Com
Peptidase_M22	PF00814.25	gi|429216464|ref|YP_007174454.1|	-	1.2e-72	244.9	0.0	1.5e-72	244.6	0.0	1.0	1	0	0	1	1	1	1	Glycoprotease	family
BcrAD_BadFG	PF01869.20	gi|429216464|ref|YP_007174454.1|	-	0.016	14.8	0.0	0.96	8.9	0.0	2.2	2	0	0	2	2	2	0	BadF/BadG/BcrA/BcrD	ATPase	family
Carbam_trans_N	PF02543.15	gi|429216464|ref|YP_007174454.1|	-	0.017	14.8	0.0	0.035	13.8	0.0	1.5	1	0	0	1	1	1	0	Carbamoyltransferase	N-terminus
OMP_b-brl_2	PF13568.6	gi|429216464|ref|YP_007174454.1|	-	0.079	13.0	0.0	0.16	12.0	0.0	1.4	1	0	0	1	1	1	0	Outer	membrane	protein	beta-barrel	domain
AnmK	PF03702.14	gi|429216464|ref|YP_007174454.1|	-	0.14	11.2	0.0	0.32	10.1	0.0	1.5	2	0	0	2	2	2	0	Anhydro-N-acetylmuramic	acid	kinase
Pkinase	PF00069.25	gi|429216465|ref|YP_007174455.1|	-	2.8e-10	40.0	0.3	4e-10	39.5	0.2	1.3	1	1	0	1	1	1	1	Protein	kinase	domain
RIO1	PF01163.22	gi|429216465|ref|YP_007174455.1|	-	5.6e-09	35.9	0.1	9.7e-09	35.1	0.1	1.3	1	1	0	1	1	1	1	RIO1	family
Pkinase_Tyr	PF07714.17	gi|429216465|ref|YP_007174455.1|	-	5.4e-08	32.4	0.0	7.9e-08	31.9	0.0	1.2	1	0	0	1	1	1	1	Protein	tyrosine	kinase
APH	PF01636.23	gi|429216465|ref|YP_007174455.1|	-	5e-06	26.6	0.0	9.8e-05	22.4	0.0	2.0	1	1	1	2	2	2	1	Phosphotransferase	enzyme	family
Choline_kinase	PF01633.20	gi|429216465|ref|YP_007174455.1|	-	1.6e-05	24.6	0.6	0.012	15.3	0.4	2.3	1	1	1	2	2	2	2	Choline/ethanolamine	kinase
WaaY	PF06176.11	gi|429216465|ref|YP_007174455.1|	-	0.00028	20.6	1.2	0.00039	20.1	1.2	1.3	1	0	0	1	1	1	1	Lipopolysaccharide	core	biosynthesis	protein	(WaaY)
Kdo	PF06293.14	gi|429216465|ref|YP_007174455.1|	-	0.00037	19.9	0.3	0.0017	17.7	0.3	1.9	1	1	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
Ham1p_like	PF01725.16	gi|429216466|ref|YP_007174456.1|	-	2.7e-45	154.6	0.0	3e-45	154.4	0.0	1.0	1	0	0	1	1	1	1	Ham1	family
DUF3236	PF11576.8	gi|429216466|ref|YP_007174456.1|	-	0.073	12.8	0.2	0.11	12.2	0.2	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3236)
DUF2120	PF09893.9	gi|429216466|ref|YP_007174456.1|	-	0.081	13.0	1.1	0.26	11.4	1.1	1.9	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2120)
POR	PF01558.18	gi|429216468|ref|YP_007174458.1|	-	2.6e-31	109.1	0.0	3e-31	108.8	0.0	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
SpoU_sub_bind	PF08032.12	gi|429216468|ref|YP_007174458.1|	-	0.022	15.0	0.1	0.068	13.5	0.0	1.8	2	1	1	3	3	3	0	RNA	2'-O	ribose	methyltransferase	substrate	binding
IstB_IS21	PF01695.17	gi|429216468|ref|YP_007174458.1|	-	0.042	13.6	0.1	0.077	12.7	0.1	1.4	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
TPP_enzyme_C	PF02775.21	gi|429216469|ref|YP_007174459.1|	-	1.6e-25	89.7	0.0	3.7e-25	88.5	0.0	1.6	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
POR_N	PF01855.19	gi|429216469|ref|YP_007174459.1|	-	6e-13	49.1	0.0	1.3e-12	48.0	0.0	1.6	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Fer4	PF00037.27	gi|429216469|ref|YP_007174459.1|	-	7.4e-09	35.1	17.4	8e-08	31.8	3.4	2.8	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|429216469|ref|YP_007174459.1|	-	6.6e-07	29.1	18.1	0.00036	20.4	2.4	2.8	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|429216469|ref|YP_007174459.1|	-	2.1e-06	27.5	17.2	1.9e-05	24.5	1.8	2.7	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|429216469|ref|YP_007174459.1|	-	2.3e-05	24.4	10.4	5.5e-05	23.3	10.4	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|429216469|ref|YP_007174459.1|	-	5.4e-05	23.2	11.8	8.1e-05	22.7	10.0	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|429216469|ref|YP_007174459.1|	-	9.6e-05	22.9	12.3	0.0031	18.1	13.0	2.4	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|429216469|ref|YP_007174459.1|	-	0.00012	22.1	12.3	0.0019	18.2	12.9	2.4	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
TPP_enzyme_N	PF02776.18	gi|429216469|ref|YP_007174459.1|	-	0.00013	21.6	0.4	0.16	11.6	0.1	2.2	2	0	0	2	2	2	2	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
Fer4_16	PF13484.6	gi|429216469|ref|YP_007174459.1|	-	0.00014	22.7	8.0	0.0024	18.8	1.1	2.8	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.7	gi|429216469|ref|YP_007174459.1|	-	0.0017	18.7	12.2	0.051	14.1	2.9	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
PFOR_II	PF17147.4	gi|429216469|ref|YP_007174459.1|	-	0.002	18.4	0.1	1.2	9.4	0.0	2.6	2	0	0	2	2	2	1	Pyruvate:ferredoxin	oxidoreductase	core	domain	II
Transketolase_C	PF02780.20	gi|429216469|ref|YP_007174459.1|	-	0.043	13.7	0.0	0.12	12.3	0.0	1.8	1	0	0	1	1	1	0	Transketolase,	C-terminal	domain
Fer4_17	PF13534.6	gi|429216469|ref|YP_007174459.1|	-	0.22	12.1	12.7	0.11	13.0	2.5	2.6	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|429216469|ref|YP_007174459.1|	-	0.24	12.0	17.8	0.25	11.9	2.9	2.9	2	1	1	3	3	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_8	PF13183.6	gi|429216469|ref|YP_007174459.1|	-	0.53	10.8	13.4	1.8	9.1	3.5	2.4	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Metallophos_2	PF12850.7	gi|429216470|ref|YP_007174460.1|	-	6.8e-27	94.7	0.0	8.3e-27	94.4	0.0	1.0	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.28	gi|429216470|ref|YP_007174460.1|	-	1.9e-09	38.3	3.6	3.5e-08	34.2	0.9	2.0	1	1	1	2	2	2	2	Calcineurin-like	phosphoesterase
LpxI_N	PF17930.1	gi|429216470|ref|YP_007174460.1|	-	0.0043	16.9	0.0	0.095	12.6	0.0	2.0	2	0	0	2	2	2	1	LpxI	N-terminal	domain
Metallophos_3	PF14582.6	gi|429216470|ref|YP_007174460.1|	-	0.0052	16.1	0.1	2.8	7.2	0.0	2.2	1	1	0	2	2	2	2	Metallophosphoesterase,	calcineurin	superfamily
PFK	PF00365.20	gi|429216470|ref|YP_007174460.1|	-	0.05	12.9	0.1	0.053	12.8	0.1	1.3	1	1	0	1	1	1	0	Phosphofructokinase
DegQ	PF08181.11	gi|429216470|ref|YP_007174460.1|	-	0.13	12.4	2.3	0.35	11.0	0.3	2.2	2	0	0	2	2	2	0	DegQ	(SacQ)	family
SLATT_5	PF18160.1	gi|429216470|ref|YP_007174460.1|	-	0.19	11.0	3.2	0.15	11.4	0.5	1.8	2	0	0	2	2	2	0	SMODS	and	SLOG-associating	2TM	effector	domain	family	5
Prok-JAB	PF14464.6	gi|429216471|ref|YP_007174461.1|	-	1.3e-10	41.1	0.0	1.5e-10	40.9	0.0	1.1	1	0	0	1	1	1	1	Prokaryotic	homologs	of	the	JAB	domain
JAB	PF01398.21	gi|429216471|ref|YP_007174461.1|	-	8e-07	29.1	0.0	1e-06	28.7	0.0	1.1	1	0	0	1	1	1	1	JAB1/Mov34/MPN/PAD-1	ubiquitin	protease
RadC	PF04002.15	gi|429216471|ref|YP_007174461.1|	-	0.085	12.8	0.0	0.12	12.4	0.0	1.3	1	0	0	1	1	1	0	RadC-like	JAB	domain
Seadorna_Vp10	PF07322.11	gi|429216471|ref|YP_007174461.1|	-	0.11	11.8	0.0	0.15	11.4	0.0	1.2	1	0	0	1	1	1	0	Seadornavirus	Vp10
Peptidase_M50	PF02163.22	gi|429216473|ref|YP_007174463.1|	-	5.3e-13	48.8	9.8	1.1e-12	47.7	9.8	1.5	1	0	0	1	1	1	1	Peptidase	family	M50
PDZ_6	PF17820.1	gi|429216473|ref|YP_007174463.1|	-	0.00041	20.1	0.0	0.00079	19.2	0.0	1.4	1	0	0	1	1	1	1	PDZ	domain
PDZ_2	PF13180.6	gi|429216473|ref|YP_007174463.1|	-	0.0005	20.3	0.0	0.0021	18.3	0.0	2.0	2	0	0	2	2	2	1	PDZ	domain
PDZ	PF00595.24	gi|429216473|ref|YP_007174463.1|	-	0.03	14.7	0.0	0.07	13.5	0.0	1.6	1	0	0	1	1	1	0	PDZ	domain
NCE101	PF11654.8	gi|429216473|ref|YP_007174463.1|	-	0.28	10.9	2.6	0.63	9.8	2.6	1.6	1	0	0	1	1	1	0	Non-classical	export	protein	1
AdoHcyase	PF05221.17	gi|429216474|ref|YP_007174464.1|	-	1.9e-63	214.4	0.0	3.1e-32	111.9	0.0	2.0	1	1	1	2	2	2	2	S-adenosyl-L-homocysteine	hydrolase
AdoHcyase_NAD	PF00670.21	gi|429216474|ref|YP_007174464.1|	-	1.1e-58	197.9	1.7	1.1e-58	197.9	1.7	2.0	2	0	0	2	2	2	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
IlvN	PF07991.12	gi|429216474|ref|YP_007174464.1|	-	3.5e-09	36.5	0.2	6.3e-09	35.6	0.2	1.5	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
2-Hacid_dh_C	PF02826.19	gi|429216474|ref|YP_007174464.1|	-	3.7e-08	32.9	0.3	7.4e-08	31.9	0.3	1.6	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
THF_DHG_CYH_C	PF02882.19	gi|429216474|ref|YP_007174464.1|	-	0.00092	18.6	1.3	0.0074	15.6	1.3	2.1	1	1	0	1	1	1	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
TrkA_N	PF02254.18	gi|429216474|ref|YP_007174464.1|	-	0.059	13.6	0.1	0.17	12.2	0.1	1.8	1	0	0	1	1	1	0	TrkA-N	domain
UPF0102	PF02021.17	gi|429216475|ref|YP_007174465.1|	-	5.1e-05	23.4	0.2	0.00016	21.8	0.1	1.9	2	0	0	2	2	2	1	Uncharacterised	protein	family	UPF0102
Mrr_cat	PF04471.12	gi|429216475|ref|YP_007174465.1|	-	0.0006	19.8	0.1	0.0011	19.0	0.1	1.3	1	0	0	1	1	1	1	Restriction	endonuclease
RE_EcoO109I	PF14511.6	gi|429216475|ref|YP_007174465.1|	-	0.011	15.4	0.5	0.044	13.4	0.1	1.9	2	0	0	2	2	2	0	Type	II	restriction	endonuclease	EcoO109I
Rota_Capsid_VP6	PF00980.17	gi|429216475|ref|YP_007174465.1|	-	0.071	12.0	1.7	0.084	11.8	0.1	1.8	2	0	0	2	2	2	0	Rotavirus	major	capsid	protein	VP6
Ras	PF00071.22	gi|429216475|ref|YP_007174465.1|	-	0.078	12.6	0.9	0.49	10.0	0.4	2.4	2	1	0	2	2	2	0	Ras	family
DUF211	PF02680.14	gi|429216476|ref|YP_007174466.1|	-	1.9e-33	114.5	4.0	2.2e-33	114.2	4.0	1.0	1	0	0	1	1	1	1	Uncharacterized	ArCR,	COG1888
TIP49	PF06068.13	gi|429216478|ref|YP_007174468.1|	-	1.8e-131	438.5	0.9	2.3e-131	438.2	0.9	1.1	1	0	0	1	1	1	1	TIP49	P-loop	domain
TIP49_C	PF17856.1	gi|429216478|ref|YP_007174468.1|	-	5.5e-23	80.9	0.3	1.2e-22	79.8	0.3	1.6	1	0	0	1	1	1	1	TIP49	AAA-lid	domain
AAA	PF00004.29	gi|429216478|ref|YP_007174468.1|	-	1.5e-12	48.1	1.5	1.3e-08	35.3	0.1	2.8	3	0	0	3	3	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.12	gi|429216478|ref|YP_007174468.1|	-	8.4e-08	32.1	0.4	0.00022	21.0	0.0	2.9	3	0	0	3	3	3	2	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_22	PF13401.6	gi|429216478|ref|YP_007174468.1|	-	1.6e-05	25.2	0.1	0.19	12.0	0.0	2.8	2	0	0	2	2	2	2	AAA	domain
AAA_7	PF12775.7	gi|429216478|ref|YP_007174468.1|	-	1.7e-05	24.4	0.0	0.00055	19.5	0.0	2.2	2	0	0	2	2	2	1	P-loop	containing	dynein	motor	region
AAA_16	PF13191.6	gi|429216478|ref|YP_007174468.1|	-	8.6e-05	23.0	0.1	0.001	19.5	0.0	2.3	2	0	0	2	2	2	1	AAA	ATPase	domain
Sigma54_activat	PF00158.26	gi|429216478|ref|YP_007174468.1|	-	0.00034	20.4	0.1	0.0044	16.7	0.0	2.4	2	0	0	2	2	2	1	Sigma-54	interaction	domain
Mg_chelatase	PF01078.21	gi|429216478|ref|YP_007174468.1|	-	0.00054	19.4	0.1	0.0049	16.3	0.1	2.2	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_2	PF07724.14	gi|429216478|ref|YP_007174468.1|	-	0.002	18.3	0.0	0.0066	16.6	0.0	1.9	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
IstB_IS21	PF01695.17	gi|429216478|ref|YP_007174468.1|	-	0.0034	17.2	0.1	0.0077	16.0	0.0	1.6	2	0	0	2	2	1	1	IstB-like	ATP	binding	protein
ResIII	PF04851.15	gi|429216478|ref|YP_007174468.1|	-	0.0038	17.3	0.2	0.051	13.6	0.2	2.4	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
RNA_helicase	PF00910.22	gi|429216478|ref|YP_007174468.1|	-	0.0066	16.8	0.0	0.017	15.5	0.0	1.7	1	0	0	1	1	1	1	RNA	helicase
AAA_18	PF13238.6	gi|429216478|ref|YP_007174468.1|	-	0.0066	17.0	0.0	0.018	15.6	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
AAA_33	PF13671.6	gi|429216478|ref|YP_007174468.1|	-	0.0087	16.2	0.0	0.027	14.6	0.0	1.8	3	0	0	3	3	1	1	AAA	domain
AAA_19	PF13245.6	gi|429216478|ref|YP_007174468.1|	-	0.0087	16.4	0.5	0.16	12.3	0.5	2.4	1	1	0	1	1	1	1	AAA	domain
PhoH	PF02562.16	gi|429216478|ref|YP_007174468.1|	-	0.011	15.2	0.1	0.022	14.2	0.1	1.5	1	0	0	1	1	1	0	PhoH-like	protein
DNA_pol3_delta2	PF13177.6	gi|429216478|ref|YP_007174468.1|	-	0.02	14.7	0.1	0.71	9.6	0.1	2.4	1	1	0	1	1	1	0	DNA	polymerase	III,	delta	subunit
Zeta_toxin	PF06414.12	gi|429216478|ref|YP_007174468.1|	-	0.033	13.5	0.3	0.076	12.3	0.0	1.7	2	0	0	2	2	2	0	Zeta	toxin
AAA_28	PF13521.6	gi|429216478|ref|YP_007174468.1|	-	0.034	14.4	0.0	0.085	13.1	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
AAA_25	PF13481.6	gi|429216478|ref|YP_007174468.1|	-	0.035	13.7	0.0	0.069	12.7	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_5	PF07728.14	gi|429216478|ref|YP_007174468.1|	-	0.044	13.8	0.1	0.26	11.3	0.0	2.3	3	0	0	3	3	2	0	AAA	domain	(dynein-related	subfamily)
AAA_30	PF13604.6	gi|429216478|ref|YP_007174468.1|	-	0.047	13.4	0.2	1.8	8.2	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
T2SSE	PF00437.20	gi|429216478|ref|YP_007174468.1|	-	0.05	12.7	0.0	0.091	11.8	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
TsaE	PF02367.17	gi|429216478|ref|YP_007174468.1|	-	0.095	12.7	0.1	0.25	11.3	0.1	1.6	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
CbiA	PF01656.23	gi|429216478|ref|YP_007174468.1|	-	0.11	12.5	0.0	6.5	6.8	0.1	2.5	2	1	0	2	2	2	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ABC_tran	PF00005.27	gi|429216478|ref|YP_007174468.1|	-	0.12	12.9	0.1	0.31	11.6	0.0	1.9	1	1	0	1	1	1	0	ABC	transporter
NACHT	PF05729.12	gi|429216478|ref|YP_007174468.1|	-	0.13	12.2	0.0	0.24	11.3	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
Parvo_NS1	PF01057.17	gi|429216478|ref|YP_007174468.1|	-	0.17	11.0	0.0	1.6	7.8	0.0	2.1	2	0	0	2	2	2	0	Parvovirus	non-structural	protein	NS1
AAA_23	PF13476.6	gi|429216478|ref|YP_007174468.1|	-	0.53	10.7	3.4	2.3	8.7	3.4	2.1	1	1	0	1	1	1	0	AAA	domain
EamA	PF00892.20	gi|429216479|ref|YP_007174469.1|	-	6.6e-33	113.8	41.7	8.4e-19	68.1	15.5	2.2	2	0	0	2	2	2	2	EamA-like	transporter	family
TPT	PF03151.16	gi|429216479|ref|YP_007174469.1|	-	0.00053	19.4	17.0	0.0074	15.7	8.8	2.2	1	1	1	2	2	2	2	Triose-phosphate	Transporter	family
RseC_MucC	PF04246.12	gi|429216479|ref|YP_007174469.1|	-	0.05	13.6	1.1	0.05	13.6	1.1	3.6	2	1	0	3	3	3	0	Positive	regulator	of	sigma(E),	RseC/MucC
DUF2244	PF10003.9	gi|429216479|ref|YP_007174469.1|	-	0.42	10.3	1.8	0.79	9.4	0.0	2.2	1	1	1	2	2	2	0	Integral	membrane	protein	(DUF2244)
PsiE	PF06146.12	gi|429216481|ref|YP_007174471.1|	-	5.7e-11	42.6	6.6	5.7e-11	42.6	6.6	2.0	2	0	0	2	2	2	1	Phosphate-starvation-inducible	E
UPF0147	PF03685.13	gi|429216483|ref|YP_007174473.1|	-	3.7e-36	123.0	0.6	4.2e-36	122.9	0.6	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0147)
UPF0253	PF06786.12	gi|429216483|ref|YP_007174473.1|	-	0.0013	18.9	0.3	0.057	13.7	0.2	2.1	1	1	0	2	2	2	1	Uncharacterised	protein	family	(UPF0253)
HEAT_2	PF13646.6	gi|429216483|ref|YP_007174473.1|	-	0.068	13.6	0.1	0.087	13.2	0.1	1.3	1	0	0	1	1	1	0	HEAT	repeats
AMP-binding	PF00501.28	gi|429216485|ref|YP_007174475.1|	-	2.3e-87	293.3	0.0	2.9e-87	293.0	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.6	gi|429216485|ref|YP_007174475.1|	-	2.8e-12	47.4	0.0	5.7e-12	46.4	0.0	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
malic	PF00390.19	gi|429216486|ref|YP_007174476.1|	-	3.8e-21	75.7	0.0	2.3e-17	63.4	0.0	2.8	1	1	0	1	1	1	1	Malic	enzyme,	N-terminal	domain
Malic_M	PF03949.15	gi|429216486|ref|YP_007174476.1|	-	8.7e-21	74.4	1.8	5.3e-20	71.8	1.8	2.1	1	1	0	1	1	1	1	Malic	enzyme,	NAD	binding	domain
PNP_UDP_1	PF01048.20	gi|429216486|ref|YP_007174476.1|	-	0.044	13.0	0.0	0.074	12.3	0.0	1.3	1	0	0	1	1	1	0	Phosphorylase	superfamily
Acetyltransf_10	PF13673.7	gi|429216487|ref|YP_007174477.1|	-	1.3e-12	47.8	0.0	1.6e-12	47.5	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.25	gi|429216487|ref|YP_007174477.1|	-	1.6e-12	47.7	0.0	2e-12	47.4	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
FR47	PF08445.10	gi|429216487|ref|YP_007174477.1|	-	7.3e-12	45.1	0.0	1.6e-11	44.0	0.0	1.5	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_7	PF13508.7	gi|429216487|ref|YP_007174477.1|	-	6.9e-11	42.4	0.0	1.1e-10	41.8	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.7	gi|429216487|ref|YP_007174477.1|	-	4.7e-09	36.6	0.3	6e-09	36.2	0.3	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.7	gi|429216487|ref|YP_007174477.1|	-	0.00012	22.2	0.0	0.00026	21.1	0.0	1.5	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.6	gi|429216487|ref|YP_007174477.1|	-	0.0014	18.7	0.0	0.0022	18.1	0.0	1.3	1	0	0	1	1	1	1	GCN5-related	N-acetyl-transferase
Acetyltransf_13	PF13880.6	gi|429216487|ref|YP_007174477.1|	-	0.013	15.5	0.0	0.029	14.3	0.0	1.5	1	0	0	1	1	1	0	ESCO1/2	acetyl-transferase
Acetyltransf_8	PF13523.6	gi|429216487|ref|YP_007174477.1|	-	0.043	13.5	0.0	1.8	8.3	0.0	2.0	2	0	0	2	2	2	0	Acetyltransferase	(GNAT)	domain
NMT	PF01233.19	gi|429216487|ref|YP_007174477.1|	-	0.081	12.8	0.1	0.11	12.3	0.1	1.3	1	0	0	1	1	1	0	Myristoyl-CoA:protein	N-myristoyltransferase,	N-terminal	domain
Acetyltransf_3	PF13302.7	gi|429216487|ref|YP_007174477.1|	-	0.093	13.4	0.0	0.12	13.1	0.0	1.1	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.25	gi|429216488|ref|YP_007174478.1|	-	4.3e-15	56.0	0.0	5.3e-15	55.7	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.7	gi|429216488|ref|YP_007174478.1|	-	1.1e-10	41.5	0.0	1.4e-10	41.2	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.7	gi|429216488|ref|YP_007174478.1|	-	5.9e-10	39.4	0.1	8.7e-10	38.9	0.1	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.7	gi|429216488|ref|YP_007174478.1|	-	0.00018	21.6	0.8	0.00023	21.3	0.8	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.7	gi|429216488|ref|YP_007174478.1|	-	0.00051	20.1	0.0	0.00085	19.4	0.0	1.3	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
AstA	PF04958.12	gi|429216488|ref|YP_007174478.1|	-	0.0013	17.4	0.0	0.014	14.0	0.0	1.9	2	0	0	2	2	2	1	Arginine	N-succinyltransferase	beta	subunit
FR47	PF08445.10	gi|429216488|ref|YP_007174478.1|	-	0.0084	16.1	0.1	0.019	14.9	0.0	1.6	2	0	0	2	2	2	1	FR47-like	protein
Acetyltransf_CG	PF14542.6	gi|429216488|ref|YP_007174478.1|	-	0.019	15.1	0.0	0.031	14.4	0.0	1.4	1	0	0	1	1	1	0	GCN5-related	N-acetyl-transferase
Acetyltransf_16	PF05301.11	gi|429216488|ref|YP_007174478.1|	-	0.045	13.5	0.0	0.084	12.6	0.0	1.5	1	1	0	1	1	1	0	GNAT	acetyltransferase,	Mec-17
Elf4	PF07011.11	gi|429216488|ref|YP_007174478.1|	-	0.7	9.8	6.9	1.1	9.2	6.9	1.3	1	0	0	1	1	1	0	Early	Flowering	4	domain
FAD-oxidase_C	PF02913.19	gi|429216489|ref|YP_007174479.1|	-	2.1e-53	181.5	0.0	2.7e-53	181.2	0.0	1.1	1	0	0	1	1	1	1	FAD	linked	oxidases,	C-terminal	domain
FAD_binding_4	PF01565.23	gi|429216489|ref|YP_007174479.1|	-	5.3e-36	123.4	0.0	5.3e-35	120.2	0.0	2.2	2	0	0	2	2	2	1	FAD	binding	domain
Dsl1_N	PF11988.8	gi|429216489|ref|YP_007174479.1|	-	1.6	7.6	6.7	0.12	11.3	1.7	1.6	2	0	0	2	2	2	0	Retrograde	transport	protein	Dsl1	N	terminal
Fer4_8	PF13183.6	gi|429216490|ref|YP_007174480.1|	-	1.7e-11	44.3	1.9	2.5e-11	43.9	1.9	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|429216490|ref|YP_007174480.1|	-	2.5e-08	34.3	2.3	4.3e-08	33.6	2.3	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|429216490|ref|YP_007174480.1|	-	7.3e-08	32.4	15.8	2e-05	24.6	8.6	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|429216490|ref|YP_007174480.1|	-	8.7e-08	32.6	18.4	1e-06	29.2	7.1	1.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|429216490|ref|YP_007174480.1|	-	4.5e-07	29.7	12.5	0.0014	18.6	2.5	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4	PF00037.27	gi|429216490|ref|YP_007174480.1|	-	5.2e-07	29.2	14.7	0.00011	21.8	4.2	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|429216490|ref|YP_007174480.1|	-	1.6e-06	28.2	8.8	0.0052	17.2	1.0	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|429216490|ref|YP_007174480.1|	-	3.2e-06	28.0	5.4	5.2e-06	27.3	4.8	1.7	1	1	0	1	1	1	1	4Fe-4S	double	cluster	binding	domain
Fer4_9	PF13187.6	gi|429216490|ref|YP_007174480.1|	-	4.3e-06	26.8	6.4	5.1e-05	23.3	7.2	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|429216490|ref|YP_007174480.1|	-	5e-06	26.3	8.9	0.0034	17.4	1.4	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|429216490|ref|YP_007174480.1|	-	4e-05	23.7	7.0	0.035	14.2	1.3	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|429216490|ref|YP_007174480.1|	-	0.00086	19.5	9.0	0.032	14.4	0.5	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|429216490|ref|YP_007174480.1|	-	0.0014	19.5	5.1	0.46	11.3	1.6	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|429216490|ref|YP_007174480.1|	-	0.14	13.2	15.0	0.99	10.5	2.8	2.2	2	0	0	2	2	2	0	4Fe-4S	binding	domain
zf-C2H2_11	PF16622.5	gi|429216490|ref|YP_007174480.1|	-	3	7.7	5.7	9.3	6.1	0.5	2.3	2	0	0	2	2	2	0	zinc-finger	C2H2-type
Fer4_13	PF13370.6	gi|429216490|ref|YP_007174480.1|	-	4.6	7.9	11.9	6	7.5	2.0	2.3	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
CCG	PF02754.16	gi|429216491|ref|YP_007174481.1|	-	1.3e-10	41.3	0.0	2.9e-09	37.0	0.0	2.2	2	0	0	2	2	2	1	Cysteine-rich	domain
DZR	PF12773.7	gi|429216492|ref|YP_007174482.1|	-	0.00015	21.7	0.1	0.00026	21.0	0.1	1.4	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_4	PF13717.6	gi|429216492|ref|YP_007174482.1|	-	0.00017	21.4	2.8	0.05	13.5	0.2	2.4	2	0	0	2	2	2	2	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|429216492|ref|YP_007174482.1|	-	0.00019	20.7	4.9	0.074	12.5	0.2	2.4	2	0	0	2	2	2	2	zinc-ribbon	domain
UPF0547	PF10571.9	gi|429216492|ref|YP_007174482.1|	-	0.00031	20.8	5.7	0.025	14.6	0.7	2.4	2	0	0	2	2	2	2	Uncharacterised	protein	family	UPF0547
OrfB_Zn_ribbon	PF07282.11	gi|429216492|ref|YP_007174482.1|	-	0.00034	20.5	0.2	0.83	9.6	0.0	2.2	2	0	0	2	2	2	2	Putative	transposase	DNA-binding	domain
TF_Zn_Ribbon	PF08271.12	gi|429216492|ref|YP_007174482.1|	-	0.00036	20.0	3.0	0.26	10.9	0.2	2.4	2	0	0	2	2	2	2	TFIIB	zinc-binding
DUF4379	PF14311.6	gi|429216492|ref|YP_007174482.1|	-	0.00048	20.4	0.8	0.0031	17.9	0.1	2.1	2	0	0	2	2	2	1	Probable	Zinc-ribbon	domain
Elf1	PF05129.13	gi|429216492|ref|YP_007174482.1|	-	0.00053	20.0	0.4	0.68	10.0	0.0	2.2	2	0	0	2	2	2	2	Transcription	elongation	factor	Elf1	like
Zn-ribbon_8	PF09723.10	gi|429216492|ref|YP_007174482.1|	-	0.00064	19.8	1.3	0.59	10.3	0.0	2.3	2	0	0	2	2	2	2	Zinc	ribbon	domain
zf-ISL3	PF14690.6	gi|429216492|ref|YP_007174482.1|	-	0.00072	20.2	1.0	0.26	12.0	0.1	2.2	2	0	0	2	2	2	1	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf_UBZ	PF18439.1	gi|429216492|ref|YP_007174482.1|	-	0.0013	18.3	1.6	0.16	11.6	0.2	2.3	2	0	0	2	2	2	1	Ubiquitin-Binding	Zinc	Finger
Sgf11	PF08209.11	gi|429216492|ref|YP_007174482.1|	-	0.0021	17.6	1.1	0.78	9.4	0.1	2.2	2	0	0	2	2	2	1	Sgf11	(transcriptional	regulation	protein)
CpXC	PF14353.6	gi|429216492|ref|YP_007174482.1|	-	0.0026	17.8	0.6	0.0062	16.6	0.6	1.6	1	1	0	1	1	1	1	CpXC	protein
zf-IS66	PF13005.7	gi|429216492|ref|YP_007174482.1|	-	0.0026	18.1	1.0	0.061	13.7	2.1	2.1	1	1	1	2	2	2	1	zinc-finger	binding	domain	of	transposase	IS66
zf-H2C2_2	PF13465.6	gi|429216492|ref|YP_007174482.1|	-	0.0034	17.7	2.3	0.4	11.2	0.7	2.3	2	0	0	2	2	2	1	Zinc-finger	double	domain
zinc_ribbon_2	PF13240.6	gi|429216492|ref|YP_007174482.1|	-	0.0035	17.0	10.6	0.032	13.9	0.4	2.7	3	0	0	3	3	2	2	zinc-ribbon	domain
zf-Mss51	PF13824.6	gi|429216492|ref|YP_007174482.1|	-	0.0038	17.3	0.6	2.2	8.4	0.1	2.3	2	0	0	2	2	2	1	Zinc-finger	of	mitochondrial	splicing	suppressor	51
DNA_RNApol_7kD	PF03604.13	gi|429216492|ref|YP_007174482.1|	-	0.0044	16.7	1.2	1.7	8.4	0.1	2.3	2	0	0	2	2	2	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
FYDLN_acid	PF09538.10	gi|429216492|ref|YP_007174482.1|	-	0.0061	17.2	1.4	3	8.6	0.2	2.1	2	0	0	2	2	2	1	Protein	of	unknown	function	(FYDLN_acid)
zf-3CxxC_2	PF17180.4	gi|429216492|ref|YP_007174482.1|	-	0.0063	17.2	1.5	0.058	14.1	0.1	2.2	2	0	0	2	2	2	1	Zinc-binding	domain
Zn_Tnp_IS1595	PF12760.7	gi|429216492|ref|YP_007174482.1|	-	0.0065	16.4	5.3	0.45	10.5	6.1	2.1	1	1	1	2	2	2	2	Transposase	zinc-ribbon	domain
DUF1610	PF07754.11	gi|429216492|ref|YP_007174482.1|	-	0.011	15.6	13.0	0.34	10.9	2.7	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
zinc_ribbon_10	PF10058.9	gi|429216492|ref|YP_007174482.1|	-	0.011	15.4	0.7	3.2	7.6	0.1	2.2	2	0	0	2	2	2	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
zf-RING_7	PF02591.15	gi|429216492|ref|YP_007174482.1|	-	0.012	15.8	2.6	1.1	9.5	0.2	2.4	2	0	0	2	2	2	0	C4-type	zinc	ribbon	domain
zinc_ribbon_5	PF13719.6	gi|429216492|ref|YP_007174482.1|	-	0.013	15.3	2.8	1.3	8.9	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
Nudix_N_2	PF14803.6	gi|429216492|ref|YP_007174482.1|	-	0.015	15.2	1.7	4	7.5	0.2	2.4	2	0	0	2	2	2	0	Nudix	N-terminal
HypA	PF01155.19	gi|429216492|ref|YP_007174482.1|	-	0.017	15.2	0.1	0.033	14.2	0.1	1.5	1	1	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zf-HIT	PF04438.16	gi|429216492|ref|YP_007174482.1|	-	0.019	14.8	1.0	3	7.8	0.2	2.2	2	0	0	2	2	2	0	HIT	zinc	finger
TFIIS_C	PF01096.18	gi|429216492|ref|YP_007174482.1|	-	0.021	14.7	4.3	0.23	11.4	0.3	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zf-NADH-PPase	PF09297.11	gi|429216492|ref|YP_007174482.1|	-	0.022	14.4	1.2	4.1	7.1	0.1	2.2	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
DUF2318	PF10080.9	gi|429216492|ref|YP_007174482.1|	-	0.022	14.8	0.2	0.37	10.9	0.0	2.0	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2318)
zf-3CxxC	PF13695.6	gi|429216492|ref|YP_007174482.1|	-	0.023	15.2	0.2	0.18	12.3	0.1	2.0	2	0	0	2	2	2	0	Zinc-binding	domain
zf-AN1	PF01428.16	gi|429216492|ref|YP_007174482.1|	-	0.023	14.9	0.9	4.4	7.5	0.2	2.1	2	0	0	2	2	2	0	AN1-like	Zinc	finger
Cys_rich_CPXG	PF14255.6	gi|429216492|ref|YP_007174482.1|	-	0.024	14.5	2.0	1.6	8.7	0.0	2.7	3	0	0	3	3	3	0	Cysteine-rich	CPXCG
DNA_ligase_ZBD	PF03119.16	gi|429216492|ref|YP_007174482.1|	-	0.03	14.4	4.1	0.41	10.7	0.1	2.3	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Ogr_Delta	PF04606.12	gi|429216492|ref|YP_007174482.1|	-	0.042	13.8	2.0	4.1	7.5	0.1	2.2	2	0	0	2	2	2	0	Ogr/Delta-like	zinc	finger
Rubredoxin	PF00301.20	gi|429216492|ref|YP_007174482.1|	-	0.045	13.8	3.5	3.3	7.8	0.5	2.5	2	0	0	2	2	2	0	Rubredoxin
zf_Rg	PF17915.1	gi|429216492|ref|YP_007174482.1|	-	0.049	13.0	2.5	4.8	6.7	0.4	2.4	2	0	0	2	2	2	0	Reverse	gyrase	zinc	finger
Peptidase_S24	PF00717.23	gi|429216492|ref|YP_007174482.1|	-	0.058	13.4	0.0	0.091	12.7	0.0	1.3	1	0	0	1	1	1	0	Peptidase	S24-like
zf-Di19	PF05605.12	gi|429216492|ref|YP_007174482.1|	-	0.063	13.6	1.9	9.6	6.6	0.0	2.2	2	0	0	2	2	2	0	Drought	induced	19	protein	(Di19),	zinc-binding
zf-ZPR1	PF03367.13	gi|429216492|ref|YP_007174482.1|	-	0.066	13.1	1.1	0.17	11.7	1.1	1.7	1	1	1	2	2	2	0	ZPR1	zinc-finger	domain
Rubredoxin_2	PF18073.1	gi|429216492|ref|YP_007174482.1|	-	0.077	12.7	1.9	2.9	7.7	0.1	2.3	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
zinc_ribbon_9	PF14369.6	gi|429216492|ref|YP_007174482.1|	-	0.08	13.2	1.1	7.5	6.9	0.2	2.3	2	0	0	2	2	2	0	zinc-ribbon
RNHCP	PF12647.7	gi|429216492|ref|YP_007174482.1|	-	0.09	12.8	0.3	3.8	7.6	0.0	2.1	2	0	0	2	2	2	0	RNHCP	domain
T4_baseplate	PF12322.8	gi|429216492|ref|YP_007174482.1|	-	0.11	11.9	0.6	9	5.7	0.0	2.2	2	0	0	2	2	2	0	T4	bacteriophage	base	plate	protein
PhnA_Zn_Ribbon	PF08274.12	gi|429216492|ref|YP_007174482.1|	-	0.12	12.3	2.7	1.6	8.8	0.2	2.2	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
zf-FPG_IleRS	PF06827.14	gi|429216492|ref|YP_007174482.1|	-	0.15	11.9	2.8	9.3	6.2	0.2	2.4	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
ADK_lid	PF05191.14	gi|429216492|ref|YP_007174482.1|	-	0.16	12.0	2.0	5	7.2	0.1	2.4	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
Prim_Zn_Ribbon	PF08273.12	gi|429216492|ref|YP_007174482.1|	-	0.26	11.6	3.2	9.9	6.5	0.3	2.4	2	0	0	2	2	2	0	Zinc-binding	domain	of	primase-helicase
zf-ACC	PF17848.1	gi|429216492|ref|YP_007174482.1|	-	0.3	11.2	3.9	6.4	7.0	0.4	2.4	2	0	0	2	2	2	0	Acetyl-coA	carboxylase	zinc	finger	domain
zf-C2H2	PF00096.26	gi|429216492|ref|YP_007174482.1|	-	0.34	11.5	4.3	9.5	6.9	0.5	2.2	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
Mu-like_Com	PF10122.9	gi|429216492|ref|YP_007174482.1|	-	0.39	10.2	1.6	13	5.3	0.1	2.2	2	0	0	2	2	2	0	Mu-like	prophage	protein	Com
zf-TFIIB	PF13453.6	gi|429216492|ref|YP_007174482.1|	-	0.42	10.0	5.0	2.9	7.3	0.0	2.6	3	0	0	3	3	2	0	Transcription	factor	zinc-finger
YacG	PF03884.14	gi|429216492|ref|YP_007174482.1|	-	0.42	10.4	3.5	7	6.5	0.5	2.4	2	0	0	2	2	2	0	DNA	gyrase	inhibitor	YacG
zf-tcix	PF14952.6	gi|429216492|ref|YP_007174482.1|	-	0.42	10.3	5.2	6.5	6.5	0.1	2.2	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
zf-HYPF	PF07503.12	gi|429216492|ref|YP_007174482.1|	-	0.5	10.2	3.6	4.4	7.1	0.3	2.2	2	0	0	2	2	2	0	HypF	finger
zf-LITAF-like	PF10601.9	gi|429216492|ref|YP_007174482.1|	-	1	9.6	4.6	8.1	6.8	0.3	2.1	1	1	1	2	2	2	0	LITAF-like	zinc	ribbon	domain
Glycos_transf_2	PF00535.26	gi|429216493|ref|YP_007174483.1|	-	1.9e-18	66.8	0.0	2.5e-18	66.5	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_4	PF13704.6	gi|429216493|ref|YP_007174483.1|	-	0.0014	19.1	0.0	0.0025	18.3	0.0	1.5	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
DUF2274	PF10038.9	gi|429216493|ref|YP_007174483.1|	-	0.079	13.4	0.0	0.19	12.2	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2274)
Enolase_C	PF00113.22	gi|429216495|ref|YP_007174485.1|	-	1.1e-113	379.4	0.1	1.6e-113	378.9	0.1	1.2	1	0	0	1	1	1	1	Enolase,	C-terminal	TIM	barrel	domain
Enolase_N	PF03952.16	gi|429216495|ref|YP_007174485.1|	-	4.5e-42	143.3	0.8	7.5e-42	142.6	0.8	1.4	1	0	0	1	1	1	1	Enolase,	N-terminal	domain
MR_MLE_C	PF13378.6	gi|429216495|ref|YP_007174485.1|	-	9.8e-05	22.0	0.0	0.00021	20.9	0.0	1.5	2	0	0	2	2	2	1	Enolase	C-terminal	domain-like
AMP-binding	PF00501.28	gi|429216496|ref|YP_007174486.1|	-	3.4e-79	266.4	0.0	4.4e-79	266.0	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.6	gi|429216496|ref|YP_007174486.1|	-	4.7e-22	78.8	0.7	9.8e-22	77.7	0.7	1.6	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
DUF1310	PF07006.11	gi|429216496|ref|YP_007174486.1|	-	0.22	11.5	3.2	0.14	12.2	0.7	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1310)
DUF3464	PF11947.8	gi|429216497|ref|YP_007174487.1|	-	0.28	10.9	1.0	0.29	10.9	0.4	1.3	1	1	0	1	1	1	0	Photosynthesis	affected	mutant	68
HTH_5	PF01022.20	gi|429216498|ref|YP_007174488.1|	-	3.6e-10	39.6	0.2	4.8e-10	39.2	0.2	1.2	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.6	gi|429216498|ref|YP_007174488.1|	-	4.1e-06	26.2	0.5	6.1e-06	25.7	0.5	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.12	gi|429216498|ref|YP_007174488.1|	-	4.8e-05	23.2	0.0	8e-05	22.5	0.0	1.3	1	0	0	1	1	1	1	HTH	domain
TrmB	PF01978.19	gi|429216498|ref|YP_007174488.1|	-	0.00018	21.3	0.0	0.00023	21.0	0.0	1.1	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_20	PF12840.7	gi|429216498|ref|YP_007174488.1|	-	0.00071	19.6	0.0	0.00084	19.4	0.0	1.1	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_45	PF14947.6	gi|429216498|ref|YP_007174488.1|	-	0.0024	17.8	0.5	0.0025	17.7	0.5	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_9	PF08221.11	gi|429216498|ref|YP_007174488.1|	-	0.0027	17.8	0.2	0.0047	17.0	0.2	1.3	1	0	0	1	1	1	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
HTH_29	PF13551.6	gi|429216498|ref|YP_007174488.1|	-	0.0076	16.3	0.0	0.0091	16.0	0.0	1.2	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_DeoR	PF08220.12	gi|429216498|ref|YP_007174488.1|	-	0.011	15.4	0.1	0.016	15.0	0.1	1.2	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
TFIIE_alpha	PF02002.17	gi|429216498|ref|YP_007174488.1|	-	0.023	14.5	0.1	0.037	13.9	0.1	1.2	1	0	0	1	1	1	0	TFIIE	alpha	subunit
Rrf2	PF02082.20	gi|429216498|ref|YP_007174488.1|	-	0.046	14.1	0.0	0.06	13.7	0.0	1.2	1	0	0	1	1	1	0	Transcriptional	regulator
MarR	PF01047.22	gi|429216498|ref|YP_007174488.1|	-	0.057	13.4	0.1	0.083	12.8	0.1	1.1	1	0	0	1	1	1	0	MarR	family
Penicillinase_R	PF03965.16	gi|429216498|ref|YP_007174488.1|	-	0.09	13.1	0.0	0.1	13.0	0.0	1.1	1	0	0	1	1	1	0	Penicillinase	repressor
SMC_ScpB	PF04079.16	gi|429216498|ref|YP_007174488.1|	-	0.11	12.1	0.0	0.12	12.0	0.0	1.1	1	0	0	1	1	1	0	Segregation	and	condensation	complex	subunit	ScpB
HTH_Crp_2	PF13545.6	gi|429216498|ref|YP_007174488.1|	-	0.12	12.4	0.0	0.13	12.2	0.0	1.2	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
Baculo_PEP_C	PF04513.12	gi|429216499|ref|YP_007174489.1|	-	0.0025	17.9	2.8	0.0058	16.7	2.8	1.6	1	0	0	1	1	1	1	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
SLATT_6	PF18169.1	gi|429216499|ref|YP_007174489.1|	-	0.0046	16.6	0.8	0.01	15.5	0.8	1.5	1	0	0	1	1	1	1	SMODS	and	SLOG-associating	2TM	effector	domain	6
FPP	PF05911.11	gi|429216499|ref|YP_007174489.1|	-	0.0087	14.3	0.1	0.012	13.9	0.1	1.0	1	0	0	1	1	1	1	Filament-like	plant	protein,	long	coiled-coil
SnoaL_2	PF12680.7	gi|429216499|ref|YP_007174489.1|	-	0.012	16.3	0.0	5.8	7.6	0.0	2.3	2	0	0	2	2	2	0	SnoaL-like	domain
BLOC1_2	PF10046.9	gi|429216499|ref|YP_007174489.1|	-	0.013	15.8	1.1	0.097	13.0	2.1	2.0	2	0	0	2	2	1	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
DUF948	PF06103.11	gi|429216499|ref|YP_007174489.1|	-	0.014	15.6	0.0	0.038	14.2	0.0	1.7	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF948)
WXG100	PF06013.12	gi|429216499|ref|YP_007174489.1|	-	0.018	15.2	0.1	0.045	14.0	0.1	1.6	1	0	0	1	1	1	0	Proteins	of	100	residues	with	WXG
DUF4446	PF14584.6	gi|429216499|ref|YP_007174489.1|	-	0.021	14.8	0.2	0.034	14.1	0.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4446)
HemX	PF04375.14	gi|429216499|ref|YP_007174489.1|	-	0.023	14.0	0.6	0.034	13.4	0.6	1.2	1	0	0	1	1	1	0	HemX,	putative	uroporphyrinogen-III	C-methyltransferase
IFT57	PF10498.9	gi|429216499|ref|YP_007174489.1|	-	0.032	13.2	0.8	0.051	12.5	0.8	1.2	1	0	0	1	1	1	0	Intra-flagellar	transport	protein	57
SHE3	PF17078.5	gi|429216499|ref|YP_007174489.1|	-	0.047	13.4	3.0	0.07	12.8	3.0	1.2	1	0	0	1	1	1	0	SWI5-dependent	HO	expression	protein	3
FlaC_arch	PF05377.11	gi|429216499|ref|YP_007174489.1|	-	0.055	13.9	2.2	6.3	7.3	0.5	3.3	2	1	1	3	3	3	0	Flagella	accessory	protein	C	(FlaC)
Laminin_II	PF06009.12	gi|429216499|ref|YP_007174489.1|	-	0.056	13.5	0.5	0.1	12.6	0.5	1.3	1	0	0	1	1	1	0	Laminin	Domain	II
EzrA	PF06160.12	gi|429216499|ref|YP_007174489.1|	-	0.062	11.5	0.4	0.089	11.0	0.4	1.1	1	0	0	1	1	1	0	Septation	ring	formation	regulator,	EzrA
SLATT_1	PF18181.1	gi|429216499|ref|YP_007174489.1|	-	0.071	13.0	0.2	0.24	11.3	0.2	1.9	1	1	0	1	1	1	0	SMODS	and	SLOG-associating	2TM	effector	domain	1
Nuc_recep-AF1	PF11825.8	gi|429216499|ref|YP_007174489.1|	-	0.073	13.1	8.8	1.6	8.8	4.9	3.1	2	1	1	3	3	3	0	Nuclear/hormone	receptor	activator	site	AF-1
Dynactin_p22	PF07426.11	gi|429216499|ref|YP_007174489.1|	-	0.082	12.8	3.5	0.32	10.9	3.3	2.0	3	0	0	3	3	2	0	Dynactin	subunit	p22
Sec34	PF04136.15	gi|429216499|ref|YP_007174489.1|	-	0.083	12.8	2.0	0.17	11.8	2.0	1.4	1	0	0	1	1	1	0	Sec34-like	family
MscS_porin	PF12795.7	gi|429216499|ref|YP_007174489.1|	-	0.12	11.9	2.8	0.18	11.4	2.8	1.1	1	0	0	1	1	1	0	Mechanosensitive	ion	channel	porin	domain
FAD-SLDH	PF12318.8	gi|429216499|ref|YP_007174489.1|	-	0.17	12.0	2.0	0.18	11.9	0.3	1.9	2	0	0	2	2	2	0	Membrane	bound	FAD	containing	D-sorbitol	dehydrogenase
DUF4201	PF13870.6	gi|429216499|ref|YP_007174489.1|	-	0.19	11.5	0.6	0.28	10.9	0.6	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4201)
FapA	PF03961.13	gi|429216499|ref|YP_007174489.1|	-	0.2	10.2	0.1	0.28	9.8	0.1	1.1	1	0	0	1	1	1	0	Flagellar	Assembly	Protein	A
PI3K_P85_iSH2	PF16454.5	gi|429216499|ref|YP_007174489.1|	-	0.73	9.4	2.7	11	5.6	0.3	2.1	1	1	1	2	2	2	0	Phosphatidylinositol	3-kinase	regulatory	subunit	P85	inter-SH2	domain
HALZ	PF02183.18	gi|429216499|ref|YP_007174489.1|	-	1.2	9.4	5.4	3.8	7.8	0.9	2.4	1	1	1	2	2	2	0	Homeobox	associated	leucine	zipper
LPP	PF04728.13	gi|429216499|ref|YP_007174489.1|	-	3.5	8.1	6.2	3.8	8.0	0.8	2.4	1	1	1	2	2	2	0	Lipoprotein	leucine-zipper
Creatininase	PF02633.14	gi|429216500|ref|YP_007174490.1|	-	3e-54	184.1	0.0	3.6e-54	183.8	0.0	1.0	1	0	0	1	1	1	1	Creatinine	amidohydrolase
ABC_tran	PF00005.27	gi|429216501|ref|YP_007174491.1|	-	3.5e-29	102.1	0.3	7.3e-29	101.0	0.1	1.6	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.6	gi|429216501|ref|YP_007174491.1|	-	2.9e-09	37.2	2.2	0.00025	21.0	0.0	2.3	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
DUF4162	PF13732.6	gi|429216501|ref|YP_007174491.1|	-	0.00039	21.1	3.0	0.00039	21.1	3.0	2.5	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF4162)
AAA_15	PF13175.6	gi|429216501|ref|YP_007174491.1|	-	0.00049	19.9	6.1	0.68	9.6	0.3	3.2	2	1	0	3	3	3	2	AAA	ATPase	domain
AAA_29	PF13555.6	gi|429216501|ref|YP_007174491.1|	-	0.002	17.8	0.2	0.0042	16.8	0.2	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
G-alpha	PF00503.20	gi|429216501|ref|YP_007174491.1|	-	0.016	14.4	0.2	0.021	14.0	0.2	1.3	1	0	0	1	1	1	0	G-protein	alpha	subunit
AAA_30	PF13604.6	gi|429216501|ref|YP_007174491.1|	-	0.055	13.2	0.1	0.11	12.1	0.1	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_23	PF13476.6	gi|429216501|ref|YP_007174491.1|	-	0.073	13.6	9.0	0.29	11.6	9.0	1.9	1	1	0	1	1	1	0	AAA	domain
ABC2_membrane	PF01061.24	gi|429216502|ref|YP_007174492.1|	-	5e-20	71.8	32.3	5e-20	71.8	32.3	1.5	2	0	0	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.7	gi|429216502|ref|YP_007174492.1|	-	5.9e-08	32.2	37.8	5.9e-08	32.2	37.8	1.9	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.7	gi|429216502|ref|YP_007174492.1|	-	0.0019	17.6	30.3	0.0067	15.7	30.3	1.8	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
MFS_1	PF07690.16	gi|429216503|ref|YP_007174493.1|	-	8.5e-18	64.4	47.0	1e-11	44.4	13.0	3.0	1	1	2	3	3	3	3	Major	Facilitator	Superfamily
Sugar_tr	PF00083.24	gi|429216503|ref|YP_007174493.1|	-	4.4e-13	48.9	24.7	2.4e-12	46.5	23.0	2.4	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
AFOR_C	PF01314.18	gi|429216504|ref|YP_007174494.1|	-	2.6e-125	418.4	0.0	3.8e-125	417.9	0.0	1.2	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	domains	2	&	3
AFOR_N	PF02730.15	gi|429216504|ref|YP_007174494.1|	-	7.1e-74	248.0	0.0	9.7e-74	247.5	0.0	1.2	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
Urm1	PF09138.11	gi|429216505|ref|YP_007174495.1|	-	6.2e-06	26.5	0.9	7e-06	26.3	0.9	1.1	1	0	0	1	1	1	1	Urm1	(Ubiquitin	related	modifier)
ThiS	PF02597.20	gi|429216505|ref|YP_007174495.1|	-	0.00042	20.9	0.0	0.00056	20.5	0.0	1.2	1	0	0	1	1	1	1	ThiS	family
Baculo_19	PF04798.12	gi|429216505|ref|YP_007174495.1|	-	0.049	13.4	0.3	0.073	12.8	0.3	1.3	1	0	0	1	1	1	0	Baculovirus	19	kDa	protein	conserved	region
Flagellin_IN	PF07196.13	gi|429216505|ref|YP_007174495.1|	-	0.077	13.2	1.0	0.12	12.6	0.2	1.6	2	0	0	2	2	2	0	Flagellin	hook	IN	motif
ThiS	PF02597.20	gi|429216506|ref|YP_007174496.1|	-	4.1e-12	46.6	0.0	4.5e-12	46.4	0.0	1.0	1	0	0	1	1	1	1	ThiS	family
Urm1	PF09138.11	gi|429216506|ref|YP_007174496.1|	-	0.0071	16.7	0.2	0.008	16.5	0.2	1.1	1	0	0	1	1	1	1	Urm1	(Ubiquitin	related	modifier)
Polbeta	PF18765.1	gi|429216506|ref|YP_007174496.1|	-	0.027	14.5	0.1	0.035	14.2	0.1	1.2	1	0	0	1	1	1	0	Polymerase	beta,	Nucleotidyltransferase
DUF2229	PF09989.9	gi|429216506|ref|YP_007174496.1|	-	0.091	12.4	0.1	0.15	11.7	0.1	1.4	1	1	0	1	1	1	0	CoA	enzyme	activase	uncharacterised	domain	(DUF2229)
RYDR_ITPR	PF01365.21	gi|429216506|ref|YP_007174496.1|	-	0.14	11.6	0.1	0.16	11.4	0.1	1.1	1	0	0	1	1	1	0	RIH	domain
MFS_1	PF07690.16	gi|429216507|ref|YP_007174497.1|	-	2.1e-27	96.0	36.4	5.2e-21	75.0	15.9	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
YwiC	PF14256.6	gi|429216507|ref|YP_007174497.1|	-	3.4	8.0	16.7	1.9	8.8	1.7	3.7	2	2	1	3	3	3	0	YwiC-like	protein
ETRAMP	PF09716.10	gi|429216507|ref|YP_007174497.1|	-	8.8	6.5	10.9	0.53	10.4	0.4	3.9	4	0	0	4	4	4	0	Malarial	early	transcribed	membrane	protein	(ETRAMP)
Auto_anti-p27	PF06677.12	gi|429216508|ref|YP_007174498.1|	-	2.5e-15	56.3	0.7	3.9e-15	55.7	0.7	1.3	1	0	0	1	1	1	1	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
TF_Zn_Ribbon	PF08271.12	gi|429216508|ref|YP_007174498.1|	-	0.047	13.2	0.6	0.13	11.8	0.5	1.9	1	1	0	1	1	1	0	TFIIB	zinc-binding
DUF2256	PF10013.9	gi|429216508|ref|YP_007174498.1|	-	0.083	13.0	0.0	0.16	12.2	0.0	1.4	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2256)
Rieske	PF00355.26	gi|429216508|ref|YP_007174498.1|	-	0.098	12.6	0.0	0.13	12.2	0.0	1.4	1	0	0	1	1	1	0	Rieske	[2Fe-2S]	domain
DNA_ligase_ZBD	PF03119.16	gi|429216508|ref|YP_007174498.1|	-	0.36	10.9	2.6	1.2	9.3	2.6	1.9	1	1	0	1	1	1	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-Mss51	PF13824.6	gi|429216508|ref|YP_007174498.1|	-	0.38	10.9	1.8	2.3	8.4	0.1	2.5	1	1	1	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
Aldose_epim	PF01263.20	gi|429216511|ref|YP_007174501.1|	-	1.3e-35	123.1	0.0	5.7e-35	121.1	0.0	1.8	1	1	0	1	1	1	1	Aldose	1-epimerase
Voltage_CLC	PF00654.20	gi|429216512|ref|YP_007174502.1|	-	6.8e-71	239.4	29.2	9.6e-71	238.9	29.2	1.2	1	0	0	1	1	1	1	Voltage	gated	chloride	channel
CBS	PF00571.28	gi|429216512|ref|YP_007174502.1|	-	5.7e-15	55.5	0.0	7.1e-07	29.6	0.1	2.5	2	0	0	2	2	2	2	CBS	domain
DUF2999	PF11212.8	gi|429216512|ref|YP_007174502.1|	-	0.25	11.6	3.9	0.31	11.3	0.3	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2999)
Polyketide_cyc	PF03364.20	gi|429216513|ref|YP_007174503.1|	-	0.011	15.9	0.0	0.013	15.7	0.0	1.2	1	0	0	1	1	1	0	Polyketide	cyclase	/	dehydrase	and	lipid	transport
YbaJ	PF10757.9	gi|429216513|ref|YP_007174503.1|	-	0.015	15.8	0.7	0.02	15.4	0.7	1.3	1	0	0	1	1	1	0	Biofilm	formation	regulator	YbaJ
CdiI_N	PF18228.1	gi|429216513|ref|YP_007174503.1|	-	0.051	13.4	0.4	0.5	10.2	0.0	2.4	1	1	1	2	2	2	0	CdiI	N-terminal	domain
R-HINP1I	PF11463.8	gi|429216513|ref|YP_007174503.1|	-	0.097	12.1	3.8	0.12	11.9	3.8	1.1	1	0	0	1	1	1	0	R.HinP1I	restriction	endonuclease
AA_permease	PF00324.21	gi|429216514|ref|YP_007174504.1|	-	8.6e-18	64.2	55.4	1.5e-17	63.3	55.4	1.4	1	1	0	1	1	1	1	Amino	acid	permease
AA_permease_2	PF13520.6	gi|429216514|ref|YP_007174504.1|	-	6.3e-13	48.3	57.3	7.9e-13	48.0	57.3	1.1	1	0	0	1	1	1	1	Amino	acid	permease
Gemini_mov	PF01708.16	gi|429216514|ref|YP_007174504.1|	-	0.073	12.8	0.1	0.073	12.8	0.1	2.1	2	0	0	2	2	2	0	Geminivirus	putative	movement	protein
DUF790	PF05626.11	gi|429216515|ref|YP_007174505.1|	-	1.6e-108	363.0	5.7	2e-108	362.6	5.7	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF790)
ResIII	PF04851.15	gi|429216516|ref|YP_007174506.1|	-	3.2e-27	95.6	0.2	1.4e-25	90.3	0.0	2.3	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.31	gi|429216516|ref|YP_007174506.1|	-	4e-21	75.4	0.2	6.5e-20	71.5	0.2	2.4	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ERCC3_RAD25_C	PF16203.5	gi|429216516|ref|YP_007174506.1|	-	9.5e-21	74.1	0.7	9.5e-21	74.1	0.7	1.5	2	0	0	2	2	2	1	ERCC3/RAD25/XPB	C-terminal	helicase
XPB_DRD	PF18458.1	gi|429216516|ref|YP_007174506.1|	-	1.4e-11	44.1	0.2	2.8e-11	43.1	0.2	1.6	1	0	0	1	1	1	1	Xeroderma	pigmentosum	group	B	helicase	damage	recognition	domain
DEAD	PF00270.29	gi|429216516|ref|YP_007174506.1|	-	1.2e-09	38.1	0.1	2.3e-08	34.0	0.1	2.4	1	1	0	1	1	1	1	DEAD/DEAH	box	helicase
SWI2_SNF2	PF18766.1	gi|429216516|ref|YP_007174506.1|	-	0.00059	19.6	0.2	0.034	13.8	0.0	2.9	2	1	0	2	2	2	1	SWI2/SNF2	ATPase
Helicase_C_2	PF13307.6	gi|429216516|ref|YP_007174506.1|	-	0.0058	16.8	2.1	0.039	14.1	0.1	3.1	2	1	1	3	3	3	1	Helicase	C-terminal	domain
AAA_22	PF13401.6	gi|429216516|ref|YP_007174506.1|	-	0.018	15.3	0.2	0.34	11.2	0.0	3.0	2	2	1	3	3	3	0	AAA	domain
IstB_IS21	PF01695.17	gi|429216516|ref|YP_007174506.1|	-	0.029	14.1	0.0	0.27	10.9	0.0	2.3	3	0	0	3	3	3	0	IstB-like	ATP	binding	protein
Thioredoxin_11	PF18078.1	gi|429216516|ref|YP_007174506.1|	-	0.077	13.1	0.4	0.19	11.9	0.4	1.6	1	0	0	1	1	1	0	Thioredoxin-like	SNTX	domain
AAA_11	PF13086.6	gi|429216516|ref|YP_007174506.1|	-	0.13	12.1	0.8	0.33	10.7	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
DUF4342	PF14242.6	gi|429216516|ref|YP_007174506.1|	-	0.54	10.3	2.2	0.98	9.5	0.4	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4342)
FMN_dh	PF01070.18	gi|429216517|ref|YP_007174507.1|	-	8.7e-17	61.2	0.2	1.4e-13	50.6	0.2	2.4	1	1	0	1	1	1	1	FMN-dependent	dehydrogenase
IMPDH	PF00478.25	gi|429216517|ref|YP_007174507.1|	-	0.0082	15.2	0.5	0.11	11.4	0.2	2.5	3	0	0	3	3	3	1	IMP	dehydrogenase	/	GMP	reductase	domain
Glyco_hydro_cc	PF11790.8	gi|429216517|ref|YP_007174507.1|	-	0.026	14.1	0.0	0.036	13.6	0.0	1.2	1	0	0	1	1	1	0	Glycosyl	hydrolase	catalytic	core
DUF257	PF03192.13	gi|429216517|ref|YP_007174507.1|	-	0.046	13.5	0.5	5.5	6.7	0.1	2.4	2	0	0	2	2	2	0	Pyrococcus	protein	of	unknown	function,	DUF257
Glu_synthase	PF01645.17	gi|429216517|ref|YP_007174507.1|	-	0.14	11.3	1.2	0.72	8.9	0.1	2.4	3	0	0	3	3	3	0	Conserved	region	in	glutamate	synthase
DHO_dh	PF01180.21	gi|429216517|ref|YP_007174507.1|	-	0.49	9.5	5.7	2	7.5	5.7	1.8	1	1	0	1	1	1	0	Dihydroorotate	dehydrogenase
polyprenyl_synt	PF00348.17	gi|429216518|ref|YP_007174508.1|	-	1.7e-66	223.9	0.0	2.3e-66	223.5	0.0	1.1	1	0	0	1	1	1	1	Polyprenyl	synthetase
tRNA-synt_1c	PF00749.21	gi|429216519|ref|YP_007174509.1|	-	2.2e-74	250.2	0.3	3.4e-74	249.6	0.0	1.5	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
tRNA-synt_1c_C	PF03950.18	gi|429216519|ref|YP_007174509.1|	-	7.3e-23	81.3	3.0	8.9e-22	77.8	0.2	2.4	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(E	and	Q),	anti-codon	binding	domain
tRNA-synt_1e	PF01406.19	gi|429216519|ref|YP_007174509.1|	-	0.05	12.9	0.9	1	8.6	0.0	2.5	2	1	0	2	2	2	0	tRNA	synthetases	class	I	(C)	catalytic	domain
DUF357	PF04010.13	gi|429216519|ref|YP_007174509.1|	-	0.16	12.1	0.2	4.2	7.5	0.0	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF357)
Spc7	PF08317.11	gi|429216519|ref|YP_007174509.1|	-	0.24	10.3	5.3	0.38	9.6	5.3	1.2	1	0	0	1	1	1	0	Spc7	kinetochore	protein
HTH_45	PF14947.6	gi|429216521|ref|YP_007174511.1|	-	1.9e-21	75.8	4.7	2.3e-21	75.6	4.7	1.1	1	0	0	1	1	1	1	Winged	helix-turn-helix
DUF4364	PF14277.6	gi|429216521|ref|YP_007174511.1|	-	9.6e-06	25.4	0.5	1.3e-05	25.0	0.5	1.3	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
S10_plectin	PF03501.15	gi|429216521|ref|YP_007174511.1|	-	0.003	17.6	0.3	0.0037	17.3	0.3	1.1	1	0	0	1	1	1	1	Plectin/S10	domain
TrmB	PF01978.19	gi|429216521|ref|YP_007174511.1|	-	0.026	14.4	0.7	0.041	13.8	0.7	1.4	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
DUF2250	PF10007.9	gi|429216521|ref|YP_007174511.1|	-	0.029	14.5	1.3	1.5	9.0	0.1	2.1	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HxlR	PF01638.17	gi|429216521|ref|YP_007174511.1|	-	0.033	14.1	0.1	0.039	13.8	0.1	1.1	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
DUF1694	PF07997.11	gi|429216521|ref|YP_007174511.1|	-	0.041	14.0	1.0	0.046	13.8	1.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1694)
FtsK_gamma	PF09397.10	gi|429216521|ref|YP_007174511.1|	-	0.098	12.5	0.1	0.14	12.0	0.1	1.2	1	0	0	1	1	1	0	Ftsk	gamma	domain
PI_PP_C	PF18365.1	gi|429216521|ref|YP_007174511.1|	-	0.12	12.3	1.4	0.16	11.9	1.4	1.2	1	0	0	1	1	1	0	Phosphoinositide	phosphatase	C-terminal	domain
Rrf2	PF02082.20	gi|429216521|ref|YP_007174511.1|	-	0.13	12.6	0.1	0.19	12.1	0.1	1.2	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_27	PF13463.6	gi|429216521|ref|YP_007174511.1|	-	0.14	12.7	0.1	0.21	12.1	0.1	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
Pirin	PF02678.16	gi|429216522|ref|YP_007174512.1|	-	1.1e-37	128.4	0.0	1.6e-37	127.7	0.0	1.3	1	0	0	1	1	1	1	Pirin
Pirin_C	PF05726.13	gi|429216522|ref|YP_007174512.1|	-	4.3e-28	97.7	0.0	5.1e-27	94.3	0.0	2.1	2	0	0	2	2	2	1	Pirin	C-terminal	cupin	domain
Cupin_2	PF07883.11	gi|429216522|ref|YP_007174512.1|	-	0.01	15.6	1.4	0.052	13.3	0.3	2.1	2	0	0	2	2	2	0	Cupin	domain
KOW	PF00467.29	gi|429216522|ref|YP_007174512.1|	-	0.068	13.1	0.2	0.14	12.2	0.2	1.5	1	0	0	1	1	1	0	KOW	motif
Cupin_3	PF05899.12	gi|429216522|ref|YP_007174512.1|	-	0.081	12.6	0.2	2.5	7.9	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF861)
Epimerase	PF01370.21	gi|429216523|ref|YP_007174513.1|	-	1.7e-16	60.4	0.1	3.2e-16	59.5	0.0	1.5	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
GDP_Man_Dehyd	PF16363.5	gi|429216523|ref|YP_007174513.1|	-	1.2e-11	44.6	0.1	3e-10	40.0	0.1	2.3	1	1	0	1	1	1	1	GDP-mannose	4,6	dehydratase
RmlD_sub_bind	PF04321.17	gi|429216523|ref|YP_007174513.1|	-	0.05	12.7	0.0	0.18	10.9	0.0	2.0	1	1	0	1	1	1	0	RmlD	substrate	binding	domain
Polysacc_synt_2	PF02719.15	gi|429216523|ref|YP_007174513.1|	-	0.061	12.4	0.1	0.17	11.0	0.1	1.7	2	0	0	2	2	2	0	Polysaccharide	biosynthesis	protein
Glycos_transf_1	PF00534.20	gi|429216524|ref|YP_007174514.1|	-	7.3e-21	74.4	0.1	1.1e-20	73.8	0.1	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|429216524|ref|YP_007174514.1|	-	5.8e-12	46.2	0.0	8.5e-12	45.7	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.6	gi|429216524|ref|YP_007174514.1|	-	3.5e-05	24.1	0.0	7.7e-05	23.0	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|429216524|ref|YP_007174514.1|	-	0.026	14.5	0.0	0.059	13.4	0.0	1.7	2	0	0	2	2	2	0	Glycosyltransferase	Family	4
DUF3600	PF12207.8	gi|429216524|ref|YP_007174514.1|	-	0.083	12.8	0.1	0.17	11.8	0.1	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3600)
MFS_1	PF07690.16	gi|429216525|ref|YP_007174515.1|	-	1.7e-11	43.7	38.6	1.7e-11	43.7	38.6	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_1	PF07690.16	gi|429216526|ref|YP_007174516.1|	-	5.1e-29	101.3	50.9	2.9e-17	62.6	21.7	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.24	gi|429216526|ref|YP_007174516.1|	-	0.07	12.0	32.0	0.089	11.6	15.5	2.6	2	0	0	2	2	2	0	Sugar	(and	other)	transporter
tRNA-synt_2	PF00152.20	gi|429216527|ref|YP_007174517.1|	-	7.4e-81	271.6	0.1	9.8e-81	271.2	0.1	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.25	gi|429216527|ref|YP_007174517.1|	-	3.1e-09	36.7	0.3	6e-09	35.8	0.3	1.5	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.20	gi|429216527|ref|YP_007174517.1|	-	1.5e-07	31.2	0.2	0.0003	20.3	0.0	2.7	3	0	0	3	3	3	2	tRNA	synthetases	class	II	core	domain	(F)
BET	PF17035.5	gi|429216527|ref|YP_007174517.1|	-	0.038	14.2	1.7	1.3	9.2	0.0	3.4	3	0	0	3	3	3	0	Bromodomain	extra-terminal	-	transcription	regulation
Metallophos_2	PF12850.7	gi|429216528|ref|YP_007174518.1|	-	9.9e-26	90.9	0.0	1.2e-25	90.6	0.0	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.28	gi|429216528|ref|YP_007174518.1|	-	2.6e-14	54.2	0.8	4.2e-14	53.5	0.8	1.3	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_3	PF14582.6	gi|429216528|ref|YP_007174518.1|	-	0.00054	19.4	0.1	0.9	8.8	0.0	3.2	2	2	0	2	2	2	2	Metallophosphoesterase,	calcineurin	superfamily
FBPase_2	PF06874.11	gi|429216528|ref|YP_007174518.1|	-	0.00055	18.4	0.1	0.0045	15.4	0.1	2.0	1	1	0	1	1	1	1	Firmicute	fructose-1,6-bisphosphatase
DUF2718	PF10918.8	gi|429216528|ref|YP_007174518.1|	-	0.024	15.1	1.3	5.2	7.6	0.1	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2718)
DUF3420	PF11900.8	gi|429216528|ref|YP_007174518.1|	-	0.11	12.7	0.0	22	5.3	0.0	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3420)
ADH_zinc_N	PF00107.26	gi|429216529|ref|YP_007174519.1|	-	7.2e-29	100.4	0.1	1.1e-28	99.8	0.1	1.3	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_N	PF08240.12	gi|429216529|ref|YP_007174519.1|	-	3.9e-21	75.0	0.0	6.6e-21	74.3	0.0	1.4	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N_2	PF13602.6	gi|429216529|ref|YP_007174519.1|	-	1.2e-14	55.5	0.0	1.7e-14	55.0	0.0	1.3	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
AlaDh_PNT_C	PF01262.21	gi|429216529|ref|YP_007174519.1|	-	0.0041	16.5	0.2	0.0069	15.7	0.2	1.3	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
TrkA_N	PF02254.18	gi|429216529|ref|YP_007174519.1|	-	0.0057	16.9	0.0	0.012	15.9	0.0	1.5	1	0	0	1	1	1	1	TrkA-N	domain
YcxB	PF14317.6	gi|429216530|ref|YP_007174520.1|	-	0.0087	15.8	1.3	0.022	14.4	1.3	1.8	1	0	0	1	1	1	1	YcxB-like	protein
APH	PF01636.23	gi|429216531|ref|YP_007174521.1|	-	0.00073	19.5	0.0	0.0012	18.8	0.0	1.3	1	0	0	1	1	1	1	Phosphotransferase	enzyme	family
Bromo_TP_like	PF17027.5	gi|429216531|ref|YP_007174521.1|	-	4.1	7.6	8.9	0.28	11.3	0.2	3.1	3	1	0	3	3	3	0	Histone-fold	protein
Glyco_hydro_15	PF00723.21	gi|429216533|ref|YP_007174523.1|	-	2.4e-17	62.9	0.7	2.3e-12	46.5	2.6	2.3	1	1	1	2	2	2	2	Glycosyl	hydrolases	family	15
GCHY-1	PF02649.14	gi|429216534|ref|YP_007174524.1|	-	2.3e-53	181.3	0.0	2.7e-53	181.2	0.0	1.0	1	0	0	1	1	1	1	Type	I	GTP	cyclohydrolase	folE2
CUTL	PF16557.5	gi|429216534|ref|YP_007174524.1|	-	0.012	15.7	0.5	0.046	13.9	0.6	1.9	2	0	0	2	2	2	0	CUT1-like	DNA-binding	domain	of	SATB
SSTK-IP	PF15836.5	gi|429216534|ref|YP_007174524.1|	-	0.027	14.6	0.1	0.054	13.6	0.1	1.5	1	0	0	1	1	1	0	SSTK-interacting	protein,	TSSK6-activating	co-chaperone	protein
tRNA_synthFbeta	PF17759.1	gi|429216535|ref|YP_007174525.1|	-	1.1e-39	136.1	0.0	1.8e-39	135.4	0.0	1.3	1	0	0	1	1	1	1	Phenylalanyl	tRNA	synthetase	beta	chain	CLM	domain
B5	PF03484.15	gi|429216535|ref|YP_007174525.1|	-	6.8e-19	67.9	1.5	1.6e-14	53.9	0.4	3.0	3	0	0	3	3	3	2	tRNA	synthetase	B5	domain
B3_4	PF03483.17	gi|429216535|ref|YP_007174525.1|	-	5.1e-09	36.0	0.9	1.4e-08	34.6	0.2	2.0	2	1	0	2	2	2	1	B3/4	domain
PhetRS_B1	PF18262.1	gi|429216535|ref|YP_007174525.1|	-	0.0048	17.1	0.3	5.7	7.2	0.0	3.4	2	1	0	2	2	2	2	Phe-tRNA	synthetase	beta	subunit	B1	domain
tRNA-synt_2d	PF01409.20	gi|429216536|ref|YP_007174526.1|	-	1e-82	277.3	0.0	1.4e-82	276.9	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	II	core	domain	(F)
tRNA_synthFbeta	PF17759.1	gi|429216536|ref|YP_007174526.1|	-	2.5e-07	30.3	0.0	4e-05	23.2	0.0	3.3	2	1	1	3	3	3	1	Phenylalanyl	tRNA	synthetase	beta	chain	CLM	domain
tRNA-synt_2	PF00152.20	gi|429216536|ref|YP_007174526.1|	-	0.0012	18.0	0.1	0.31	10.1	0.0	3.1	3	0	0	3	3	3	1	tRNA	synthetases	class	II	(D,	K	and	N)
TrmB	PF01978.19	gi|429216536|ref|YP_007174526.1|	-	0.017	15.0	1.1	0.049	13.5	1.1	1.8	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
AAA_assoc_C	PF09821.9	gi|429216536|ref|YP_007174526.1|	-	0.033	14.7	2.1	0.061	13.9	0.3	2.5	2	1	0	2	2	2	0	C-terminal	AAA-associated	domain
IES5	PF17335.2	gi|429216536|ref|YP_007174526.1|	-	0.062	13.6	0.2	0.062	13.6	0.2	2.0	2	0	0	2	2	2	0	Ino80	complex	subunit	5
MCR_D	PF02505.14	gi|429216536|ref|YP_007174526.1|	-	0.16	11.8	2.2	1.2	9.0	1.8	2.6	3	1	0	3	3	3	0	Methyl-coenzyme	M	reductase	operon	protein	D
Peptidase_M19	PF01244.21	gi|429216537|ref|YP_007174527.1|	-	5.5e-65	219.6	0.0	6.1e-65	219.5	0.0	1.0	1	0	0	1	1	1	1	Membrane	dipeptidase	(Peptidase	family	M19)
Amidohydro_2	PF04909.14	gi|429216537|ref|YP_007174527.1|	-	2.8e-05	24.1	0.0	0.00015	21.7	0.0	1.9	1	1	0	1	1	1	1	Amidohydrolase
RMMBL	PF07521.12	gi|429216537|ref|YP_007174527.1|	-	0.044	13.7	0.1	0.12	12.3	0.1	1.7	1	0	0	1	1	1	0	Zn-dependent	metallo-hydrolase	RNA	specificity	domain
DUF4258	PF14076.6	gi|429216537|ref|YP_007174527.1|	-	0.1	13.0	0.0	0.22	11.9	0.0	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4258)
Pyr_excise	PF03013.14	gi|429216538|ref|YP_007174528.1|	-	0.00013	21.9	1.4	0.00025	21.0	1.4	1.6	1	1	0	1	1	1	1	Pyrimidine	dimer	DNA	glycosylase
ATPase	PF06745.13	gi|429216539|ref|YP_007174529.1|	-	6.9e-42	143.4	1.3	6.9e-42	143.4	1.3	1.6	2	0	0	2	2	2	1	KaiC
GvpD	PF07088.11	gi|429216539|ref|YP_007174529.1|	-	1.2e-07	30.8	0.6	1.2e-07	30.8	0.6	1.6	2	0	0	2	2	2	1	GvpD	gas	vesicle	protein
AAA_25	PF13481.6	gi|429216539|ref|YP_007174529.1|	-	1.9e-07	30.9	0.0	3.1e-07	30.2	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_24	PF13479.6	gi|429216539|ref|YP_007174529.1|	-	0.00011	22.0	0.0	0.00022	21.0	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|429216539|ref|YP_007174529.1|	-	0.00072	19.8	0.0	0.0017	18.6	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.17	gi|429216539|ref|YP_007174529.1|	-	0.00095	18.9	0.0	0.0021	17.8	0.0	1.5	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
ABC_tran	PF00005.27	gi|429216539|ref|YP_007174529.1|	-	0.0049	17.4	0.0	0.0088	16.6	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
DUF2075	PF09848.9	gi|429216539|ref|YP_007174529.1|	-	0.0063	15.8	0.0	0.0088	15.3	0.0	1.3	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_14	PF13173.6	gi|429216539|ref|YP_007174529.1|	-	0.012	15.7	0.2	0.032	14.3	0.2	1.8	1	0	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.12	gi|429216539|ref|YP_007174529.1|	-	0.012	14.9	0.0	0.021	14.1	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
AAA_18	PF13238.6	gi|429216539|ref|YP_007174529.1|	-	0.012	16.1	0.3	0.026	15.1	0.0	1.7	2	0	0	2	2	1	0	AAA	domain
AAA	PF00004.29	gi|429216539|ref|YP_007174529.1|	-	0.012	16.0	0.2	0.046	14.2	0.1	2.1	2	1	0	2	2	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Rad51	PF08423.11	gi|429216539|ref|YP_007174529.1|	-	0.021	14.1	0.0	0.04	13.2	0.0	1.4	1	0	0	1	1	1	0	Rad51
DnaB_C	PF03796.15	gi|429216539|ref|YP_007174529.1|	-	0.024	14.0	0.1	0.083	12.2	0.1	1.9	1	1	0	1	1	1	0	DnaB-like	helicase	C	terminal	domain
Zot	PF05707.12	gi|429216539|ref|YP_007174529.1|	-	0.03	14.0	0.0	0.07	12.8	0.0	1.6	1	0	0	1	1	1	0	Zonular	occludens	toxin	(Zot)
AAA_7	PF12775.7	gi|429216539|ref|YP_007174529.1|	-	0.031	13.8	0.1	0.098	12.2	0.1	1.8	2	0	0	2	2	2	0	P-loop	containing	dynein	motor	region
Sigma54_activ_2	PF14532.6	gi|429216539|ref|YP_007174529.1|	-	0.033	14.3	0.0	0.13	12.4	0.0	2.0	2	0	0	2	2	1	0	Sigma-54	interaction	domain
TniB	PF05621.11	gi|429216539|ref|YP_007174529.1|	-	0.038	13.4	0.0	0.11	11.9	0.0	1.7	1	1	0	1	1	1	0	Bacterial	TniB	protein
AAA_16	PF13191.6	gi|429216539|ref|YP_007174529.1|	-	0.043	14.2	0.0	0.074	13.4	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
PhoH	PF02562.16	gi|429216539|ref|YP_007174529.1|	-	0.077	12.4	0.0	0.16	11.4	0.0	1.5	1	0	0	1	1	1	0	PhoH-like	protein
APS_kinase	PF01583.20	gi|429216539|ref|YP_007174529.1|	-	0.093	12.6	0.0	0.15	11.9	0.0	1.4	1	0	0	1	1	1	0	Adenylylsulphate	kinase
NACHT	PF05729.12	gi|429216539|ref|YP_007174529.1|	-	0.11	12.5	0.0	0.41	10.6	0.0	1.9	1	1	0	1	1	1	0	NACHT	domain
Img2	PF05046.14	gi|429216539|ref|YP_007174529.1|	-	0.12	12.7	0.1	0.43	10.9	0.0	2.0	2	0	0	2	2	2	0	Mitochondrial	large	subunit	ribosomal	protein	(Img2)
AAA_5	PF07728.14	gi|429216539|ref|YP_007174529.1|	-	0.12	12.3	0.1	1.9	8.5	0.1	2.3	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
Mg_chelatase	PF01078.21	gi|429216539|ref|YP_007174529.1|	-	0.13	11.6	0.0	0.21	10.9	0.0	1.2	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
ATP-synt_ab	PF00006.25	gi|429216539|ref|YP_007174529.1|	-	0.15	11.7	0.1	0.38	10.4	0.1	1.6	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
Nitroreductase	PF00881.24	gi|429216540|ref|YP_007174530.1|	-	1.3e-20	74.2	0.3	3.7e-20	72.7	0.3	1.7	1	1	0	1	1	1	1	Nitroreductase	family
NMT	PF01233.19	gi|429216540|ref|YP_007174530.1|	-	0.0093	15.8	0.0	0.015	15.1	0.0	1.4	1	0	0	1	1	1	1	Myristoyl-CoA:protein	N-myristoyltransferase,	N-terminal	domain
2-Hacid_dh_C	PF02826.19	gi|429216541|ref|YP_007174531.1|	-	3.1e-44	150.4	0.0	5.6e-44	149.6	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.30	gi|429216541|ref|YP_007174531.1|	-	9.9e-21	73.8	0.0	1.1e-20	73.6	0.0	1.1	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
NAD_binding_2	PF03446.15	gi|429216541|ref|YP_007174531.1|	-	2.7e-06	27.6	0.0	6.8e-06	26.3	0.0	1.7	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
IlvN	PF07991.12	gi|429216541|ref|YP_007174531.1|	-	0.00076	19.1	0.0	0.014	15.0	0.0	2.2	2	0	0	2	2	2	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
AlaDh_PNT_C	PF01262.21	gi|429216541|ref|YP_007174531.1|	-	0.0046	16.3	0.0	0.056	12.7	0.0	2.2	1	1	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
Shikimate_DH	PF01488.20	gi|429216541|ref|YP_007174531.1|	-	0.075	13.1	0.0	0.21	11.7	0.0	1.8	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
NAD_kinase	PF01513.21	gi|429216542|ref|YP_007174532.1|	-	1.6e-07	30.8	0.0	2.2e-07	30.4	0.0	1.3	1	1	0	1	1	1	1	ATP-NAD	kinase
DAGK_cat	PF00781.24	gi|429216542|ref|YP_007174532.1|	-	7.1e-05	22.4	0.0	0.0023	17.5	0.0	2.3	2	0	0	2	2	2	1	Diacylglycerol	kinase	catalytic	domain
DUF5411	PF17424.2	gi|429216542|ref|YP_007174532.1|	-	0.095	12.7	1.5	3	7.8	0.2	2.3	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5411)
Biotin_lipoyl	PF00364.22	gi|429216543|ref|YP_007174533.1|	-	3.5e-16	58.8	0.8	3.6e-16	58.7	0.8	1.1	1	0	0	1	1	1	1	Biotin-requiring	enzyme
Biotin_lipoyl_2	PF13533.6	gi|429216543|ref|YP_007174533.1|	-	6e-09	35.6	0.3	0.00022	21.0	0.2	2.1	1	1	1	2	2	2	2	Biotin-lipoyl	like
QRPTase_N	PF02749.16	gi|429216543|ref|YP_007174533.1|	-	0.00072	19.6	0.1	0.12	12.4	0.0	2.1	1	1	1	2	2	2	2	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
HlyD_D23	PF16576.5	gi|429216543|ref|YP_007174533.1|	-	0.0035	16.6	0.1	0.031	13.5	0.1	1.9	1	1	1	2	2	2	1	Barrel-sandwich	domain	of	CusB	or	HlyD	membrane-fusion
PYNP_C	PF07831.13	gi|429216543|ref|YP_007174533.1|	-	0.0057	16.3	0.3	0.3	10.8	0.1	2.1	1	1	1	2	2	2	1	Pyrimidine	nucleoside	phosphorylase	C-terminal	domain
HlyD_3	PF13437.6	gi|429216543|ref|YP_007174533.1|	-	0.023	15.4	0.1	3.1	8.5	0.0	2.0	1	1	1	2	2	2	0	HlyD	family	secretion	protein
PASTA	PF03793.19	gi|429216543|ref|YP_007174533.1|	-	0.032	14.1	0.6	0.8	9.6	0.4	2.0	1	1	1	2	2	2	0	PASTA	domain
E1_dh	PF00676.20	gi|429216544|ref|YP_007174534.1|	-	2.5e-83	279.5	0.0	3.6e-83	279.0	0.0	1.2	1	0	0	1	1	1	1	Dehydrogenase	E1	component
Transket_pyr	PF02779.24	gi|429216544|ref|YP_007174534.1|	-	8.2e-46	155.9	0.0	3.6e-45	153.8	0.0	2.0	2	0	0	2	2	2	1	Transketolase,	pyrimidine	binding	domain
Transketolase_C	PF02780.20	gi|429216544|ref|YP_007174534.1|	-	6.3e-35	119.8	0.1	1.4e-34	118.7	0.1	1.6	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
TPP_enzyme_C	PF02775.21	gi|429216544|ref|YP_007174534.1|	-	1.2e-06	28.4	0.5	1.5e-05	24.8	0.2	2.7	2	1	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
PFOR_II	PF17147.4	gi|429216544|ref|YP_007174534.1|	-	0.00014	22.1	0.0	0.0021	18.3	0.0	3.1	3	0	0	3	3	3	1	Pyruvate:ferredoxin	oxidoreductase	core	domain	II
DXP_synthase_N	PF13292.6	gi|429216544|ref|YP_007174534.1|	-	0.00039	19.7	0.1	0.0009	18.5	0.1	1.5	1	0	0	1	1	1	1	1-deoxy-D-xylulose-5-phosphate	synthase
Transketolase_N	PF00456.21	gi|429216544|ref|YP_007174534.1|	-	0.0046	16.0	0.0	0.0075	15.3	0.0	1.3	1	0	0	1	1	1	1	Transketolase,	thiamine	diphosphate	binding	domain
OsmC	PF02566.19	gi|429216545|ref|YP_007174535.1|	-	5.4e-12	46.1	0.0	6.8e-12	45.8	0.0	1.1	1	0	0	1	1	1	1	OsmC-like	protein
2-oxoacid_dh	PF00198.23	gi|429216546|ref|YP_007174536.1|	-	4.3e-70	235.8	0.1	5e-70	235.6	0.1	1.0	1	0	0	1	1	1	1	2-oxoacid	dehydrogenases	acyltransferase	(catalytic	domain)
Transferase	PF02458.15	gi|429216546|ref|YP_007174536.1|	-	0.0042	15.8	0.9	0.0065	15.2	0.0	1.8	3	0	0	3	3	3	1	Transferase	family
BROMI	PF14961.6	gi|429216546|ref|YP_007174536.1|	-	0.013	13.0	0.5	0.014	12.8	0.5	1.0	1	0	0	1	1	1	0	Broad-minded	protein
AATase	PF07247.12	gi|429216546|ref|YP_007174536.1|	-	0.031	12.8	1.0	2.1	6.8	0.0	2.4	2	1	0	2	2	2	0	Alcohol	acetyltransferase
ThiS	PF02597.20	gi|429216547|ref|YP_007174537.1|	-	9.4e-06	26.2	0.1	1.4e-05	25.6	0.1	1.4	1	1	0	1	1	1	1	ThiS	family
Thioredoxin_15	PF18403.1	gi|429216547|ref|YP_007174537.1|	-	0.06	13.3	0.0	0.067	13.1	0.0	1.1	1	0	0	1	1	1	0	Thioredoxin-like	domain
CheC	PF04509.12	gi|429216547|ref|YP_007174537.1|	-	0.24	11.3	0.7	0.86	9.6	0.1	2.0	2	0	0	2	2	2	0	CheC-like	family
AIM24	PF01987.17	gi|429216548|ref|YP_007174538.1|	-	5.2e-47	160.2	1.2	5.9e-47	160.1	1.2	1.0	1	0	0	1	1	1	1	Mitochondrial	biogenesis	AIM24
FAD_binding_2	PF00890.24	gi|429216549|ref|YP_007174539.1|	-	5.9e-102	341.9	0.0	7.1e-102	341.6	0.0	1.1	1	0	0	1	1	1	1	FAD	binding	domain
Succ_DH_flav_C	PF02910.20	gi|429216549|ref|YP_007174539.1|	-	4.2e-40	136.7	0.0	6.3e-40	136.1	0.0	1.3	1	0	0	1	1	1	1	Fumarate	reductase	flavoprotein	C-term
Pyr_redox_2	PF07992.14	gi|429216549|ref|YP_007174539.1|	-	0.0034	16.7	0.3	0.0073	15.6	0.3	1.7	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.24	gi|429216549|ref|YP_007174539.1|	-	0.0074	15.9	0.1	0.016	14.8	0.1	1.6	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Thi4	PF01946.17	gi|429216549|ref|YP_007174539.1|	-	0.0091	15.3	0.1	0.2	10.8	0.1	2.2	2	0	0	2	2	2	1	Thi4	family
NAD_binding_8	PF13450.6	gi|429216549|ref|YP_007174539.1|	-	0.036	14.3	0.2	0.086	13.1	0.2	1.7	1	0	0	1	1	1	0	NAD(P)-binding	Rossmann-like	domain
PBECR1	PF18809.1	gi|429216549|ref|YP_007174539.1|	-	0.15	12.8	0.3	2.4	8.9	0.1	2.2	1	1	1	2	2	2	0	phage-Barnase-EndoU-ColicinE5/D-RelE	like	nuclease1
Glyco_tranf_2_3	PF13641.6	gi|429216550|ref|YP_007174540.1|	-	1.8e-23	83.6	0.0	3e-23	82.9	0.0	1.3	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.6	gi|429216550|ref|YP_007174540.1|	-	9.4e-21	74.6	0.0	1.4e-20	74.1	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glycos_transf_2	PF00535.26	gi|429216550|ref|YP_007174540.1|	-	2.1e-15	56.9	0.0	3.2e-15	56.4	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.6	gi|429216550|ref|YP_007174540.1|	-	5.4e-07	29.3	0.0	1e-06	28.4	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Anp1	PF03452.14	gi|429216550|ref|YP_007174540.1|	-	0.16	11.3	1.0	1.4	8.2	0.1	2.1	2	0	0	2	2	2	0	Anp1
Gate	PF07670.14	gi|429216550|ref|YP_007174540.1|	-	1.8	8.9	5.1	0.73	10.1	0.6	2.5	3	0	0	3	3	3	0	Nucleoside	recognition
MFS_1	PF07690.16	gi|429216551|ref|YP_007174541.1|	-	1.5e-27	96.5	36.1	3.5e-27	95.2	32.9	2.0	1	1	0	1	1	1	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.24	gi|429216551|ref|YP_007174541.1|	-	2.2e-05	23.5	26.7	0.0055	15.6	4.0	3.1	1	1	2	3	3	3	3	Sugar	(and	other)	transporter
NUDIX	PF00293.28	gi|429216553|ref|YP_007174543.1|	-	7.3e-18	64.9	0.0	8.6e-18	64.6	0.0	1.1	1	0	0	1	1	1	1	NUDIX	domain
GatB_N	PF02934.15	gi|429216554|ref|YP_007174544.1|	-	3.2e-74	249.8	0.2	4.9e-74	249.1	0.2	1.3	1	0	0	1	1	1	1	GatB/GatE	catalytic	domain
GatB_Yqey	PF02637.18	gi|429216554|ref|YP_007174544.1|	-	6.2e-24	84.6	10.6	6.2e-24	84.6	10.6	2.2	3	0	0	3	3	3	1	GatB	domain
GAD	PF02938.14	gi|429216554|ref|YP_007174544.1|	-	2.8e-18	65.9	0.2	2.8e-18	65.9	0.2	2.2	2	0	0	2	2	2	1	GAD	domain
YqeY	PF09424.10	gi|429216554|ref|YP_007174544.1|	-	0.00042	20.4	7.1	0.0012	18.9	5.4	2.5	1	1	1	2	2	2	1	Yqey-like	protein
Phage_min_cap2	PF06152.11	gi|429216554|ref|YP_007174544.1|	-	0.056	12.3	1.2	0.11	11.4	1.2	1.5	1	0	0	1	1	1	0	Phage	minor	capsid	protein	2
MnmE_helical	PF12631.7	gi|429216554|ref|YP_007174544.1|	-	0.91	9.6	4.6	2.8	8.1	4.6	1.8	1	0	0	1	1	1	0	MnmE	helical	domain
Asparaginase	PF00710.20	gi|429216555|ref|YP_007174545.1|	-	1.6e-58	197.4	0.0	3.6e-58	196.3	0.0	1.6	1	0	0	1	1	1	1	Asparaginase,	N-terminal
Asparaginase_C	PF17763.1	gi|429216555|ref|YP_007174545.1|	-	1.4e-33	115.5	0.0	3.5e-33	114.2	0.0	1.7	1	0	0	1	1	1	1	Glutaminase/Asparaginase	C-terminal	domain
GatD_N	PF18195.1	gi|429216555|ref|YP_007174545.1|	-	3.7e-23	80.6	1.6	1.1e-22	79.1	1.6	1.8	1	0	0	1	1	1	1	GatD	N-terminal	domain
Ribosomal_S30	PF04758.14	gi|429216556|ref|YP_007174546.1|	-	5.5e-12	45.7	3.4	5.6e-12	45.7	3.4	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S30
Nop	PF01798.18	gi|429216557|ref|YP_007174547.1|	-	2.6e-70	236.5	0.0	4.1e-70	235.8	0.0	1.3	1	0	0	1	1	1	1	snoRNA	binding	domain,	fibrillarin
Fibrillarin	PF01269.17	gi|429216558|ref|YP_007174548.1|	-	2.5e-100	334.3	0.1	2.8e-100	334.1	0.1	1.0	1	0	0	1	1	1	1	Fibrillarin
PCMT	PF01135.19	gi|429216558|ref|YP_007174548.1|	-	0.00051	19.9	0.0	0.0009	19.1	0.0	1.6	1	1	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Calycin_like	PF13944.6	gi|429216558|ref|YP_007174548.1|	-	0.18	12.1	0.1	1	9.6	0.0	1.9	2	0	0	2	2	2	0	Calycin-like	beta-barrel	domain
DUF61	PF01886.16	gi|429216559|ref|YP_007174549.1|	-	4e-26	91.5	1.6	4.9e-26	91.3	1.6	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF61
PALP	PF00291.25	gi|429216560|ref|YP_007174550.1|	-	2.4e-76	257.0	0.1	2.8e-76	256.8	0.1	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
ACT	PF01842.25	gi|429216560|ref|YP_007174550.1|	-	0.0062	16.3	0.0	0.015	15.0	0.0	1.7	1	0	0	1	1	1	1	ACT	domain
DUF627	PF04781.12	gi|429216560|ref|YP_007174550.1|	-	0.014	15.4	0.0	0.03	14.3	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF627)
TPP_enzyme_C	PF02775.21	gi|429216562|ref|YP_007174552.1|	-	1e-27	96.8	0.4	1.5e-27	96.2	0.0	1.5	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
PFO_beta_C	PF12367.8	gi|429216562|ref|YP_007174552.1|	-	1.4e-19	70.0	0.9	2.5e-19	69.2	0.9	1.5	1	0	0	1	1	1	1	Pyruvate	ferredoxin	oxidoreductase	beta	subunit	C	terminal
DUF2452	PF10504.9	gi|429216562|ref|YP_007174552.1|	-	0.15	11.5	0.0	0.23	10.9	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2452)
POR_N	PF01855.19	gi|429216563|ref|YP_007174553.1|	-	1.4e-60	205.0	0.0	2e-60	204.4	0.0	1.2	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
POR	PF01558.18	gi|429216563|ref|YP_007174553.1|	-	1.6e-32	113.0	0.1	3.8e-32	111.8	0.1	1.6	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
PFOR_II	PF17147.4	gi|429216563|ref|YP_007174553.1|	-	1.5e-08	34.9	0.0	4.6e-08	33.3	0.0	1.9	2	0	0	2	2	2	1	Pyruvate:ferredoxin	oxidoreductase	core	domain	II
TPP_enzyme_N	PF02776.18	gi|429216563|ref|YP_007174553.1|	-	0.079	12.6	0.0	0.14	11.8	0.0	1.4	1	0	0	1	1	1	0	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
ETF_alpha	PF00766.19	gi|429216564|ref|YP_007174554.1|	-	1.5e-29	101.8	0.0	4.4e-29	100.4	0.0	1.8	1	0	0	1	1	1	1	Electron	transfer	flavoprotein	FAD-binding	domain
ETF	PF01012.21	gi|429216564|ref|YP_007174554.1|	-	1.6e-09	37.9	0.0	2.7e-09	37.2	0.0	1.3	1	0	0	1	1	1	1	Electron	transfer	flavoprotein	domain
ETF	PF01012.21	gi|429216565|ref|YP_007174555.1|	-	3.5e-36	124.8	0.0	4.8e-36	124.4	0.0	1.1	1	0	0	1	1	1	1	Electron	transfer	flavoprotein	domain
Lon_C	PF05362.13	gi|429216565|ref|YP_007174555.1|	-	0.0054	16.3	0.0	0.011	15.3	0.0	1.5	1	0	0	1	1	1	1	Lon	protease	(S16)	C-terminal	proteolytic	domain
DUF424	PF04242.13	gi|429216566|ref|YP_007174556.1|	-	5.4e-22	77.9	0.7	6.4e-22	77.6	0.7	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF424)
TPP_enzyme_C	PF02775.21	gi|429216567|ref|YP_007174557.1|	-	3e-27	95.3	0.0	4.7e-27	94.6	0.0	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
PFO_beta_C	PF12367.8	gi|429216567|ref|YP_007174557.1|	-	1.9e-17	63.2	0.0	3.5e-17	62.3	0.0	1.4	1	0	0	1	1	1	1	Pyruvate	ferredoxin	oxidoreductase	beta	subunit	C	terminal
POR_N	PF01855.19	gi|429216568|ref|YP_007174558.1|	-	6.9e-51	173.2	0.0	1e-50	172.6	0.0	1.3	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
POR	PF01558.18	gi|429216568|ref|YP_007174558.1|	-	8e-37	127.0	1.1	9.9e-37	126.7	0.1	1.6	2	0	0	2	2	2	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
PFOR_II	PF17147.4	gi|429216568|ref|YP_007174558.1|	-	1e-09	38.6	0.0	3.4e-09	36.9	0.0	2.0	1	0	0	1	1	1	1	Pyruvate:ferredoxin	oxidoreductase	core	domain	II
Transketolase_C	PF02780.20	gi|429216568|ref|YP_007174558.1|	-	3.9e-08	33.2	0.0	1.4e-07	31.5	0.0	1.9	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
TPP_enzyme_N	PF02776.18	gi|429216568|ref|YP_007174558.1|	-	0.0029	17.3	1.1	0.0095	15.6	1.0	1.8	1	1	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
Imm32	PF15566.6	gi|429216568|ref|YP_007174558.1|	-	0.12	12.2	0.0	0.29	10.9	0.0	1.6	1	0	0	1	1	1	0	Immunity	protein	32
S_4TM	PF18159.1	gi|429216569|ref|YP_007174559.1|	-	0.045	13.1	0.1	0.072	12.4	0.1	1.2	1	0	0	1	1	1	0	SMODS-associating	4TM	effector	domain
Mrx7	PF10906.8	gi|429216569|ref|YP_007174559.1|	-	0.14	12.5	0.0	0.44	10.8	0.0	1.9	1	1	0	1	1	1	0	MIOREX	complex	component	7
LtrA	PF06772.11	gi|429216569|ref|YP_007174559.1|	-	0.19	10.9	0.3	0.26	10.5	0.3	1.1	1	0	0	1	1	1	0	Bacterial	low	temperature	requirement	A	protein	(LtrA)
GHMP_kinases_N	PF00288.26	gi|429216570|ref|YP_007174560.1|	-	0.0069	16.6	0.0	0.019	15.2	0.0	1.7	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
OCIA	PF07051.11	gi|429216570|ref|YP_007174560.1|	-	0.077	13.0	0.0	0.17	12.0	0.0	1.5	1	0	0	1	1	1	0	Ovarian	carcinoma	immunoreactive	antigen	(OCIA)
PPS_PS	PF02006.16	gi|429216571|ref|YP_007174561.1|	-	7.3e-69	230.8	0.4	9e-69	230.5	0.4	1.1	1	0	0	1	1	1	1	Phosphopantothenate/pantothenate	synthetase
NTP_transf_3	PF12804.7	gi|429216572|ref|YP_007174562.1|	-	2e-20	73.8	0.0	2.6e-20	73.4	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
CTP_transf_3	PF02348.19	gi|429216572|ref|YP_007174562.1|	-	5e-09	36.4	0.0	7.5e-09	35.8	0.0	1.3	1	0	0	1	1	1	1	Cytidylyltransferase
NTP_transferase	PF00483.23	gi|429216572|ref|YP_007174562.1|	-	4.3e-05	23.2	0.0	6.7e-05	22.6	0.0	1.3	1	0	0	1	1	1	1	Nucleotidyl	transferase
CofC	PF01983.16	gi|429216572|ref|YP_007174562.1|	-	0.0013	17.9	0.0	0.0022	17.2	0.0	1.3	1	0	0	1	1	1	1	Guanylyl	transferase	CofC	like
DUF1940	PF09155.10	gi|429216572|ref|YP_007174562.1|	-	0.042	14.0	0.2	0.09	12.9	0.0	1.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1940)
Spuma_A9PTase	PF03539.14	gi|429216572|ref|YP_007174562.1|	-	0.11	12.7	0.1	0.24	11.5	0.0	1.7	2	0	0	2	2	2	0	Spumavirus	aspartic	protease	(A9)
HAD_2	PF13419.6	gi|429216573|ref|YP_007174563.1|	-	2.8e-27	96.0	1.1	3.3e-27	95.7	1.1	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.26	gi|429216573|ref|YP_007174563.1|	-	8.5e-10	39.3	0.1	1.2e-08	35.5	0.1	2.1	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.6	gi|429216573|ref|YP_007174563.1|	-	0.036	14.1	0.0	0.1	12.7	0.0	1.7	1	0	0	1	1	1	0	HAD-hyrolase-like
GCH_III	PF05165.12	gi|429216574|ref|YP_007174564.1|	-	2.2e-45	154.8	0.2	5.5e-45	153.5	0.2	1.5	1	1	0	1	1	1	1	GTP	cyclohydrolase	III
GGDEF	PF00990.21	gi|429216574|ref|YP_007174564.1|	-	0.11	12.2	0.2	0.74	9.6	0.0	2.3	2	1	1	3	3	3	0	Diguanylate	cyclase,	GGDEF	domain
DMRL_synthase	PF00885.19	gi|429216575|ref|YP_007174565.1|	-	2.8e-31	108.2	0.0	3.2e-31	108.1	0.0	1.0	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
NTP_transf_2	PF01909.23	gi|429216576|ref|YP_007174566.1|	-	5e-09	36.3	0.1	1.4e-08	34.9	0.1	1.8	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
Polbeta	PF18765.1	gi|429216576|ref|YP_007174566.1|	-	6.4e-06	26.2	0.1	1.4e-05	25.0	0.1	1.6	1	0	0	1	1	1	1	Polymerase	beta,	Nucleotidyltransferase
BTP	PF05232.12	gi|429216577|ref|YP_007174567.1|	-	0.1	12.7	0.3	0.57	10.3	0.2	2.3	2	0	0	2	2	2	0	Chlorhexidine	efflux	transporter
DUF309	PF03745.14	gi|429216578|ref|YP_007174568.1|	-	1.4e-08	34.3	0.1	2e-08	33.8	0.1	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF309)
NAD_kinase	PF01513.21	gi|429216579|ref|YP_007174569.1|	-	1.9e-45	155.3	0.1	2.1e-45	155.1	0.1	1.0	1	0	0	1	1	1	1	ATP-NAD	kinase
DAGK_cat	PF00781.24	gi|429216579|ref|YP_007174569.1|	-	0.004	16.8	0.0	0.013	15.1	0.0	1.9	2	0	0	2	2	2	1	Diacylglycerol	kinase	catalytic	domain
Peroxin-22	PF12827.7	gi|429216579|ref|YP_007174569.1|	-	3.3	7.7	5.8	53	3.8	5.4	2.8	1	1	1	2	2	2	0	Peroxisomal	biogenesis	protein	family
ABC_tran	PF00005.27	gi|429216580|ref|YP_007174570.1|	-	4.5e-32	111.4	0.0	1.1e-31	110.2	0.0	1.7	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.12	gi|429216580|ref|YP_007174570.1|	-	3.7e-19	69.0	0.1	7.4e-19	68.0	0.1	1.5	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.6	gi|429216580|ref|YP_007174570.1|	-	5.3e-08	33.0	1.1	0.00021	21.2	0.0	2.5	2	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|429216580|ref|YP_007174570.1|	-	2.1e-06	27.3	1.1	0.0003	20.3	0.0	2.7	2	1	1	3	3	3	1	RecF/RecN/SMC	N	terminal	domain
AAA_22	PF13401.6	gi|429216580|ref|YP_007174570.1|	-	0.0001	22.6	0.7	0.14	12.4	0.2	2.5	2	1	0	2	2	2	2	AAA	domain
AAA_10	PF12846.7	gi|429216580|ref|YP_007174570.1|	-	0.0021	17.0	0.0	0.039	12.9	0.0	2.1	2	0	0	2	2	2	1	AAA-like	domain
AAA_29	PF13555.6	gi|429216580|ref|YP_007174570.1|	-	0.003	17.2	0.0	0.0056	16.4	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_13	PF13166.6	gi|429216580|ref|YP_007174570.1|	-	0.011	14.4	0.0	0.43	9.1	0.0	2.9	3	0	0	3	3	3	0	AAA	domain
AAA_16	PF13191.6	gi|429216580|ref|YP_007174570.1|	-	0.011	16.1	0.0	0.022	15.2	0.0	1.5	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_25	PF13481.6	gi|429216580|ref|YP_007174570.1|	-	0.012	15.3	0.0	5.8	6.4	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
IstB_IS21	PF01695.17	gi|429216580|ref|YP_007174570.1|	-	0.015	15.0	0.0	4.6	6.9	0.0	2.3	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
RsgA_GTPase	PF03193.16	gi|429216580|ref|YP_007174570.1|	-	0.023	14.6	0.8	0.039	13.9	0.1	1.7	2	0	0	2	2	2	0	RsgA	GTPase
AAA_18	PF13238.6	gi|429216580|ref|YP_007174570.1|	-	0.044	14.3	0.0	0.15	12.6	0.0	1.9	1	0	0	1	1	1	0	AAA	domain
DUF3987	PF13148.6	gi|429216580|ref|YP_007174570.1|	-	0.046	12.7	0.0	0.079	12.0	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3987)
PRK	PF00485.18	gi|429216580|ref|YP_007174570.1|	-	0.046	13.5	0.0	0.15	11.7	0.0	1.8	2	0	0	2	2	2	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_23	PF13476.6	gi|429216580|ref|YP_007174570.1|	-	0.11	13.0	1.2	0.45	11.0	0.1	2.3	3	0	0	3	3	2	0	AAA	domain
AAA_5	PF07728.14	gi|429216580|ref|YP_007174570.1|	-	0.13	12.2	0.0	0.46	10.5	0.0	2.0	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
DUF87	PF01935.17	gi|429216580|ref|YP_007174570.1|	-	1.4	8.9	4.3	1.3	9.0	0.4	2.6	2	1	1	3	3	3	0	Helicase	HerA,	central	domain
ABC_tran	PF00005.27	gi|429216581|ref|YP_007174571.1|	-	1.1e-26	93.9	0.0	1.3e-24	87.2	0.0	2.6	1	1	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.12	gi|429216581|ref|YP_007174571.1|	-	7.3e-21	74.5	0.1	2.1e-20	73.0	0.1	1.8	2	0	0	2	2	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.6	gi|429216581|ref|YP_007174571.1|	-	6.7e-09	36.0	2.2	5.4e-07	29.7	0.8	2.6	2	1	0	2	2	2	1	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|429216581|ref|YP_007174571.1|	-	8.8e-08	31.9	2.2	1.9e-06	27.5	0.3	2.1	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
GatB_Yqey	PF02637.18	gi|429216581|ref|YP_007174571.1|	-	0.0051	16.7	2.0	0.013	15.4	2.0	1.8	1	1	0	1	1	1	1	GatB	domain
PRK	PF00485.18	gi|429216581|ref|YP_007174571.1|	-	0.011	15.5	0.0	0.021	14.6	0.0	1.5	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_13	PF13166.6	gi|429216581|ref|YP_007174571.1|	-	0.011	14.4	0.6	0.023	13.4	0.1	1.7	2	0	0	2	2	2	0	AAA	domain
AAA_16	PF13191.6	gi|429216581|ref|YP_007174571.1|	-	0.014	15.8	0.0	0.035	14.5	0.0	1.6	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_18	PF13238.6	gi|429216581|ref|YP_007174571.1|	-	0.032	14.8	1.0	0.57	10.7	1.0	2.4	1	1	0	1	1	1	0	AAA	domain
Rad17	PF03215.15	gi|429216581|ref|YP_007174571.1|	-	0.032	14.2	0.0	0.092	12.7	0.0	1.7	1	0	0	1	1	1	0	Rad17	P-loop	domain
AAA_29	PF13555.6	gi|429216581|ref|YP_007174571.1|	-	0.055	13.2	0.0	0.1	12.4	0.0	1.3	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.6	gi|429216581|ref|YP_007174571.1|	-	0.061	13.6	0.1	0.63	10.3	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
MMR_HSR1	PF01926.23	gi|429216581|ref|YP_007174571.1|	-	0.13	12.4	0.1	2.3	8.3	0.1	2.5	2	0	0	2	2	2	0	50S	ribosome-binding	GTPase
AAA	PF00004.29	gi|429216581|ref|YP_007174571.1|	-	0.16	12.4	0.1	1.5	9.2	0.0	2.3	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ABC_ATPase	PF09818.9	gi|429216581|ref|YP_007174571.1|	-	0.5	9.1	2.5	11	4.7	0.2	2.7	2	1	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
BPD_transp_1	PF00528.22	gi|429216582|ref|YP_007174572.1|	-	5.4e-31	107.8	15.4	5.4e-31	107.8	15.4	1.6	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.7	gi|429216582|ref|YP_007174572.1|	-	1.4e-05	25.0	2.7	1.4e-05	25.0	2.7	3.6	5	0	0	5	5	5	1	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
PIG-P	PF08510.12	gi|429216582|ref|YP_007174572.1|	-	0.49	10.3	5.7	0.43	10.5	1.9	2.4	2	0	0	2	2	2	0	PIG-P
SpoVAB	PF13782.6	gi|429216582|ref|YP_007174572.1|	-	0.76	10.1	7.4	0.34	11.2	1.9	2.6	2	1	0	2	2	2	0	Stage	V	sporulation	protein	AB
BPD_transp_1	PF00528.22	gi|429216583|ref|YP_007174573.1|	-	8.3e-34	116.9	10.8	8.3e-34	116.9	10.8	2.8	1	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
SBP_bac_5	PF00496.22	gi|429216584|ref|YP_007174574.1|	-	1.7e-51	175.4	6.6	4.3e-51	174.1	6.6	1.7	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
PKD	PF00801.20	gi|429216584|ref|YP_007174574.1|	-	4.2e-08	32.9	14.7	1e-06	28.5	0.6	4.6	4	1	1	5	5	5	2	PKD	domain
Tir_receptor_C	PF07489.11	gi|429216584|ref|YP_007174574.1|	-	1.6	8.7	8.4	2.9	7.8	8.4	1.4	1	0	0	1	1	1	0	Translocated	intimin	receptor	(Tir)	C-terminus
ATP_synt_H	PF05493.13	gi|429216584|ref|YP_007174574.1|	-	3.9	8.0	5.8	12	6.4	5.8	1.9	1	0	0	1	1	1	0	ATP	synthase	subunit	H
Asparaginase_2	PF01112.18	gi|429216585|ref|YP_007174575.1|	-	1e-73	248.0	0.1	1.2e-73	247.8	0.1	1.0	1	0	0	1	1	1	1	Asparaginase
TrmB	PF01978.19	gi|429216586|ref|YP_007174576.1|	-	4.3e-18	65.0	1.1	4.6e-16	58.4	0.1	2.7	3	0	0	3	3	3	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_45	PF14947.6	gi|429216586|ref|YP_007174576.1|	-	0.0019	18.1	0.9	0.01	15.8	0.1	2.5	1	1	1	2	2	2	1	Winged	helix-turn-helix
HTH_24	PF13412.6	gi|429216586|ref|YP_007174576.1|	-	0.0032	17.0	0.2	0.0089	15.6	0.0	1.9	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
DUF2250	PF10007.9	gi|429216586|ref|YP_007174576.1|	-	0.0085	16.2	0.1	0.023	14.8	0.1	1.8	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
MarR	PF01047.22	gi|429216586|ref|YP_007174576.1|	-	0.015	15.2	0.0	0.035	14.0	0.0	1.6	1	0	0	1	1	1	0	MarR	family
PadR	PF03551.14	gi|429216586|ref|YP_007174576.1|	-	0.019	14.9	1.5	0.062	13.3	0.0	2.6	4	0	0	4	4	4	0	Transcriptional	regulator	PadR-like	family
HTH_47	PF16221.5	gi|429216586|ref|YP_007174576.1|	-	0.021	14.4	0.0	0.043	13.4	0.0	1.5	1	0	0	1	1	1	0	winged	helix-turn-helix
B-block_TFIIIC	PF04182.12	gi|429216586|ref|YP_007174576.1|	-	0.042	14.0	0.4	0.11	12.7	0.4	1.8	1	1	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
Rrf2	PF02082.20	gi|429216586|ref|YP_007174576.1|	-	0.071	13.5	0.0	0.14	12.5	0.0	1.5	1	0	0	1	1	1	0	Transcriptional	regulator
MarR_2	PF12802.7	gi|429216586|ref|YP_007174576.1|	-	0.075	12.9	0.0	0.14	12.1	0.0	1.3	1	0	0	1	1	1	0	MarR	family
E2F_TDP	PF02319.20	gi|429216586|ref|YP_007174576.1|	-	0.18	11.8	1.0	2.3	8.3	0.3	2.5	1	1	1	2	2	2	0	E2F/DP	family	winged-helix	DNA-binding	domain
PadR	PF03551.14	gi|429216587|ref|YP_007174577.1|	-	1.5e-11	44.1	0.4	3.4e-11	42.9	0.1	1.8	2	1	0	2	2	2	1	Transcriptional	regulator	PadR-like	family
HTH_45	PF14947.6	gi|429216587|ref|YP_007174577.1|	-	0.003	17.5	0.7	0.0082	16.1	0.1	2.0	2	0	0	2	2	2	1	Winged	helix-turn-helix
RTP	PF02334.16	gi|429216587|ref|YP_007174577.1|	-	0.025	15.2	0.0	0.078	13.6	0.0	1.9	1	1	1	2	2	2	0	Replication	terminator	protein
Mrr_N	PF14338.6	gi|429216587|ref|YP_007174577.1|	-	0.056	13.6	0.1	0.28	11.4	0.0	1.9	2	0	0	2	2	2	0	Mrr	N-terminal	domain
AAA_assoc_C	PF09821.9	gi|429216587|ref|YP_007174577.1|	-	0.068	13.7	0.2	12	6.5	0.0	2.2	2	0	0	2	2	2	0	C-terminal	AAA-associated	domain
Stork_head	PF10264.9	gi|429216587|ref|YP_007174577.1|	-	0.18	12.0	0.0	0.33	11.1	0.0	1.5	1	0	0	1	1	1	0	Winged	helix	Storkhead-box1	domain
Phage_integrase	PF00589.22	gi|429216588|ref|YP_007174578.1|	-	5.3e-31	107.7	0.6	1.5e-30	106.2	0.2	1.9	2	1	0	2	2	2	1	Phage	integrase	family
Phage_int_SAM_4	PF13495.6	gi|429216588|ref|YP_007174578.1|	-	3e-10	40.4	0.6	1.1e-06	29.0	0.1	2.7	1	1	1	2	2	2	2	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_5	PF13102.6	gi|429216588|ref|YP_007174578.1|	-	8.3e-06	26.1	3.6	2.6e-05	24.5	2.0	2.3	2	0	0	2	2	2	1	Phage	integrase	SAM-like	domain
Phage_int_SAM_1	PF02899.17	gi|429216588|ref|YP_007174578.1|	-	3.1e-05	24.2	0.1	0.00052	20.3	0.0	2.8	2	1	1	3	3	3	2	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_6	PF18644.1	gi|429216588|ref|YP_007174578.1|	-	0.0067	16.5	2.6	1.1	9.3	0.2	2.6	1	1	1	2	2	2	2	Phage	integrase	SAM-like	domain
Phage_int_SAM_3	PF14659.6	gi|429216588|ref|YP_007174578.1|	-	0.048	13.9	1.2	0.048	13.9	1.2	2.6	1	1	1	2	2	2	0	Phage	integrase,	N-terminal	SAM-like	domain
TF_Zn_Ribbon	PF08271.12	gi|429216589|ref|YP_007174579.1|	-	1e-09	37.7	0.5	6.6e-09	35.1	0.1	2.3	2	0	0	2	2	2	1	TFIIB	zinc-binding
A2L_zn_ribbon	PF08792.10	gi|429216589|ref|YP_007174579.1|	-	2.1e-06	27.3	1.1	3.5e-06	26.6	1.1	1.4	1	0	0	1	1	1	1	A2L	zinc	ribbon	domain
zf-RRN7	PF11781.8	gi|429216589|ref|YP_007174579.1|	-	2e-05	24.2	0.3	3e-05	23.6	0.3	1.2	1	0	0	1	1	1	1	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
Ribosomal_S27e	PF01667.17	gi|429216589|ref|YP_007174579.1|	-	0.00031	20.4	0.2	0.00059	19.5	0.2	1.4	1	0	0	1	1	1	1	Ribosomal	protein	S27
zf-ribbon_3	PF13248.6	gi|429216589|ref|YP_007174579.1|	-	0.0012	18.1	1.2	0.4	10.2	0.2	2.3	2	0	0	2	2	2	2	zinc-ribbon	domain
zinc_ribbon_2	PF13240.6	gi|429216589|ref|YP_007174579.1|	-	0.013	15.1	2.6	4	7.3	0.5	2.7	2	0	0	2	2	2	0	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.7	gi|429216589|ref|YP_007174579.1|	-	0.021	14.8	0.8	0.038	14.0	0.8	1.4	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
ARL2_Bind_BART	PF11527.8	gi|429216589|ref|YP_007174579.1|	-	0.021	14.9	3.1	1.3	9.1	1.5	2.2	1	1	1	2	2	2	0	The	ARF-like	2	binding	protein	BART
OrfB_Zn_ribbon	PF07282.11	gi|429216589|ref|YP_007174579.1|	-	0.032	14.1	0.2	0.068	13.1	0.2	1.5	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
Lar_restr_allev	PF14354.6	gi|429216589|ref|YP_007174579.1|	-	0.044	14.2	0.5	0.11	12.9	0.5	1.6	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
RPA_interact_C	PF14768.6	gi|429216589|ref|YP_007174579.1|	-	0.067	13.8	0.0	0.1	13.1	0.0	1.4	1	0	0	1	1	1	0	Replication	protein	A	interacting	C-terminal
Elf1	PF05129.13	gi|429216589|ref|YP_007174579.1|	-	0.072	13.2	0.4	0.2	11.7	0.2	1.9	1	1	1	2	2	2	0	Transcription	elongation	factor	Elf1	like
zf-RRPl_C4	PF17026.5	gi|429216589|ref|YP_007174579.1|	-	0.074	13.2	3.8	0.25	11.5	3.8	2.0	1	1	0	1	1	1	0	Putative	ribonucleoprotein	zinc-finger	pf	C4	type
DZR	PF12773.7	gi|429216589|ref|YP_007174579.1|	-	0.075	13.1	0.3	0.15	12.1	0.3	1.4	1	0	0	1	1	1	0	Double	zinc	ribbon
SRCR_2	PF15494.6	gi|429216589|ref|YP_007174579.1|	-	0.14	12.7	0.9	0.58	10.7	0.2	2.1	1	1	1	2	2	2	0	Scavenger	receptor	cysteine-rich	domain
Zn_ribbon_recom	PF13408.6	gi|429216589|ref|YP_007174579.1|	-	0.17	12.5	2.2	1.7	9.2	0.1	2.7	2	1	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
ArfGap	PF01412.18	gi|429216589|ref|YP_007174579.1|	-	0.45	10.6	3.6	0.35	10.9	2.1	1.8	2	1	0	2	2	2	0	Putative	GTPase	activating	protein	for	Arf
TFIIS_C	PF01096.18	gi|429216589|ref|YP_007174579.1|	-	0.75	9.7	2.6	14	5.6	2.6	2.2	1	1	0	1	1	1	0	Transcription	factor	S-II	(TFIIS)
MMR_HSR1	PF01926.23	gi|429216590|ref|YP_007174580.1|	-	8.7e-21	74.1	3.1	2.3e-20	72.8	0.7	2.3	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
NOG1	PF06858.14	gi|429216590|ref|YP_007174580.1|	-	5.5e-20	70.9	1.6	5.5e-20	70.9	1.6	2.9	4	0	0	4	4	2	1	Nucleolar	GTP-binding	protein	1	(NOG1)
NOG1_N	PF17835.1	gi|429216590|ref|YP_007174580.1|	-	1e-15	58.1	1.2	1e-15	58.1	1.2	1.7	2	0	0	2	2	2	1	NOG1	N-terminal	helical	domain
FeoB_N	PF02421.18	gi|429216590|ref|YP_007174580.1|	-	5.5e-14	52.0	2.3	1e-13	51.1	2.3	1.4	1	0	0	1	1	1	1	Ferrous	iron	transport	protein	B
GTP_EFTU	PF00009.27	gi|429216590|ref|YP_007174580.1|	-	4.5e-07	29.6	0.3	8.5e-05	22.2	0.3	2.6	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
AIG1	PF04548.16	gi|429216590|ref|YP_007174580.1|	-	1.3e-06	27.9	1.2	1.3e-06	27.9	1.2	2.0	3	0	0	3	3	3	1	AIG1	family
PduV-EutP	PF10662.9	gi|429216590|ref|YP_007174580.1|	-	0.00041	20.1	2.6	0.0013	18.5	1.2	2.5	2	1	0	2	2	2	1	Ethanolamine	utilisation	-	propanediol	utilisation
SRPRB	PF09439.10	gi|429216590|ref|YP_007174580.1|	-	0.0011	18.4	0.8	0.0011	18.4	0.8	2.3	3	0	0	3	3	3	1	Signal	recognition	particle	receptor	beta	subunit
Roc	PF08477.13	gi|429216590|ref|YP_007174580.1|	-	0.002	18.4	0.0	0.0097	16.1	0.0	2.1	1	1	0	1	1	1	1	Ras	of	Complex,	Roc,	domain	of	DAPkinase
Dynamin_N	PF00350.23	gi|429216590|ref|YP_007174580.1|	-	0.0053	16.8	5.0	0.78	9.8	0.2	3.4	2	1	1	3	3	3	1	Dynamin	family
cobW	PF02492.19	gi|429216590|ref|YP_007174580.1|	-	0.013	15.1	2.2	1.3	8.6	0.8	2.7	1	1	1	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
PPV_E1_C	PF00519.17	gi|429216590|ref|YP_007174580.1|	-	0.02	13.8	0.0	0.028	13.3	0.0	1.2	1	0	0	1	1	1	0	Papillomavirus	helicase
TniB	PF05621.11	gi|429216590|ref|YP_007174580.1|	-	0.026	14.0	0.5	0.28	10.6	0.1	2.6	2	1	0	2	2	2	0	Bacterial	TniB	protein
Septin	PF00735.18	gi|429216590|ref|YP_007174580.1|	-	0.026	13.8	15.8	0.92	8.7	5.5	3.2	2	1	1	3	3	3	0	Septin
AAA_16	PF13191.6	gi|429216590|ref|YP_007174580.1|	-	0.038	14.4	0.0	0.09	13.2	0.0	1.5	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_18	PF13238.6	gi|429216590|ref|YP_007174580.1|	-	0.04	14.5	0.2	0.17	12.4	0.0	2.4	2	1	0	2	2	2	0	AAA	domain
AAA_27	PF13514.6	gi|429216590|ref|YP_007174580.1|	-	0.067	12.8	0.0	1.7	8.2	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
AAA_29	PF13555.6	gi|429216590|ref|YP_007174580.1|	-	0.086	12.6	0.0	0.2	11.4	0.0	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
ABC_tran	PF00005.27	gi|429216590|ref|YP_007174580.1|	-	0.1	13.1	0.1	0.23	12.0	0.0	1.8	2	0	0	2	2	1	0	ABC	transporter
RsgA_GTPase	PF03193.16	gi|429216590|ref|YP_007174580.1|	-	0.12	12.3	7.8	3.2	7.7	0.6	3.3	3	1	0	3	3	3	0	RsgA	GTPase
ATP_bind_1	PF03029.17	gi|429216590|ref|YP_007174580.1|	-	0.13	12.0	0.9	12	5.5	0.0	2.5	1	1	1	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
AAA_22	PF13401.6	gi|429216590|ref|YP_007174580.1|	-	0.13	12.5	0.5	0.84	9.9	0.5	2.3	1	1	0	1	1	1	0	AAA	domain
DUF1041	PF06292.17	gi|429216590|ref|YP_007174580.1|	-	0.24	11.8	0.1	0.24	11.8	0.1	2.6	2	1	1	3	3	3	0	Domain	of	Unknown	Function	(DUF1041)
Guanylate_kin	PF00625.21	gi|429216590|ref|YP_007174580.1|	-	0.27	10.9	3.8	4	7.1	0.0	2.9	2	1	1	3	3	3	0	Guanylate	kinase
AAA	PF00004.29	gi|429216590|ref|YP_007174580.1|	-	0.37	11.2	4.3	1.8	9.0	2.3	2.8	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_14	PF13173.6	gi|429216590|ref|YP_007174580.1|	-	0.44	10.6	0.0	0.44	10.6	0.0	2.9	2	1	0	3	3	3	0	AAA	domain
AAA_23	PF13476.6	gi|429216590|ref|YP_007174580.1|	-	5	7.6	20.2	7.5	7.0	9.4	3.1	1	1	1	2	2	2	0	AAA	domain
ELFV_dehydrog	PF00208.21	gi|429216591|ref|YP_007174581.1|	-	8.8e-68	228.6	2.6	1.1e-67	228.3	2.6	1.1	1	0	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
ELFV_dehydrog_N	PF02812.18	gi|429216591|ref|YP_007174581.1|	-	3.8e-56	188.5	0.0	1.8e-55	186.4	0.0	1.9	2	0	0	2	2	2	1	Glu/Leu/Phe/Val	dehydrogenase,	dimerisation	domain
2-Hacid_dh_C	PF02826.19	gi|429216591|ref|YP_007174581.1|	-	3.5e-05	23.2	0.1	6.7e-05	22.3	0.1	1.5	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
AdoHcyase_NAD	PF00670.21	gi|429216591|ref|YP_007174581.1|	-	0.0011	19.1	0.6	0.0025	17.9	0.6	1.6	1	1	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
NAD_binding_7	PF13241.6	gi|429216591|ref|YP_007174581.1|	-	0.0089	16.5	0.0	0.017	15.6	0.0	1.5	1	0	0	1	1	1	1	Putative	NAD(P)-binding
Bac_GDH	PF05088.12	gi|429216591|ref|YP_007174581.1|	-	0.017	12.6	0.0	0.024	12.1	0.0	1.1	1	0	0	1	1	1	0	Bacterial	NAD-glutamate	dehydrogenase
Shikimate_DH	PF01488.20	gi|429216591|ref|YP_007174581.1|	-	0.066	13.3	0.4	1	9.4	0.1	2.4	2	0	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
Pyr_redox	PF00070.27	gi|429216591|ref|YP_007174581.1|	-	0.82	10.3	4.7	16	6.2	0.2	3.7	2	1	2	4	4	4	0	Pyridine	nucleotide-disulphide	oxidoreductase
DrsE	PF02635.15	gi|429216592|ref|YP_007174582.1|	-	1.1e-10	41.9	0.0	1.2e-10	41.7	0.0	1.1	1	0	0	1	1	1	1	DsrE/DsrF-like	family
DrsE_2	PF13686.6	gi|429216592|ref|YP_007174582.1|	-	0.014	15.3	0.0	0.016	15.1	0.0	1.2	1	0	0	1	1	1	0	DsrE/DsrF/DrsH-like	family
PA26	PF04636.13	gi|429216592|ref|YP_007174582.1|	-	0.11	11.4	0.1	0.13	11.1	0.1	1.0	1	0	0	1	1	1	0	PA26	p53-induced	protein	(sestrin)
Fam20C	PF06702.12	gi|429216592|ref|YP_007174582.1|	-	0.16	11.8	0.0	0.2	11.5	0.0	1.3	1	1	0	1	1	1	0	Golgi	casein	kinase,	C-terminal,	Fam20
Peptidase_M24	PF00557.24	gi|429216593|ref|YP_007174583.1|	-	1.1e-56	191.9	0.0	1.3e-56	191.6	0.0	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.18	gi|429216593|ref|YP_007174583.1|	-	4.3e-07	30.6	0.0	8.5e-07	29.7	0.0	1.5	1	0	0	1	1	1	1	Creatinase/Prolidase	N-terminal	domain
TMCO5	PF14992.6	gi|429216593|ref|YP_007174583.1|	-	0.036	13.6	0.0	0.051	13.1	0.0	1.2	1	0	0	1	1	1	0	TMCO5	family
PG_binding_4	PF12229.8	gi|429216593|ref|YP_007174583.1|	-	0.11	12.8	1.7	0.23	11.7	1.1	1.9	2	0	0	2	2	2	0	Putative	peptidoglycan	binding	domain
Ribosomal_L37e	PF01907.19	gi|429216594|ref|YP_007174584.1|	-	5.9e-25	87.2	9.3	6.5e-25	87.0	9.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L37e
zf-RING_10	PF16685.5	gi|429216594|ref|YP_007174584.1|	-	0.075	13.2	0.7	0.077	13.1	0.7	1.2	1	0	0	1	1	1	0	zinc	RING	finger	of	MSL2
MraY_sig1	PF10555.9	gi|429216594|ref|YP_007174584.1|	-	0.26	10.9	1.3	0.41	10.3	1.3	1.3	1	0	0	1	1	1	0	Phospho-N-acetylmuramoyl-pentapeptide-transferase	signature	1
LSM	PF01423.22	gi|429216595|ref|YP_007174585.1|	-	1.1e-20	73.1	0.0	1.2e-20	72.9	0.0	1.1	1	0	0	1	1	1	1	LSM	domain
SM-ATX	PF14438.6	gi|429216595|ref|YP_007174585.1|	-	0.077	13.1	0.0	0.086	13.0	0.0	1.1	1	0	0	1	1	1	0	Ataxin	2	SM	domain
DUF1947	PF09183.10	gi|429216596|ref|YP_007174586.1|	-	1.8e-22	79.4	0.7	1.8e-22	79.4	0.7	1.9	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1947)
PUA	PF01472.20	gi|429216596|ref|YP_007174586.1|	-	3.6e-18	65.3	0.2	7.2e-18	64.3	0.2	1.5	1	0	0	1	1	1	1	PUA	domain
Pre-PUA	PF17832.1	gi|429216596|ref|YP_007174586.1|	-	7.9e-05	23.3	0.6	0.00047	20.8	0.6	2.1	1	1	0	1	1	1	1	Pre-PUA-like	domain
RNA_pol_RpbG	PF16992.5	gi|429216597|ref|YP_007174587.1|	-	3.8e-40	136.6	1.1	4.2e-40	136.5	1.1	1.0	1	0	0	1	1	1	1	DNA-directed	RNA	polymerase,	subunit	G
Rieske	PF00355.26	gi|429216598|ref|YP_007174588.1|	-	2.4e-11	43.4	0.0	3e-11	43.1	0.0	1.1	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Rieske_2	PF13806.6	gi|429216598|ref|YP_007174588.1|	-	1e-07	31.8	0.0	1.3e-07	31.5	0.0	1.1	1	0	0	1	1	1	1	Rieske-like	[2Fe-2S]	domain
Radical_SAM	PF04055.21	gi|429216599|ref|YP_007174589.1|	-	1.1e-18	68.2	0.0	1e-17	65.0	0.0	2.3	2	0	0	2	2	2	1	Radical	SAM	superfamily
B12-binding	PF02310.19	gi|429216599|ref|YP_007174589.1|	-	0.0096	16.0	0.0	0.034	14.2	0.0	1.9	2	0	0	2	2	2	1	B12	binding	domain
Fer4_12	PF13353.6	gi|429216599|ref|YP_007174589.1|	-	0.032	14.5	0.0	0.095	13.0	0.0	1.8	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|429216599|ref|YP_007174589.1|	-	0.045	13.9	0.1	0.15	12.2	0.0	2.0	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Toast_rack_N	PF17115.5	gi|429216600|ref|YP_007174590.1|	-	0.042	14.1	0.0	0.09	13.1	0.0	1.5	1	1	1	2	2	2	0	N-terminal	domain	of	toast_rack,	DUF2154
PIRT	PF15099.6	gi|429216601|ref|YP_007174591.1|	-	9.9	5.8	8.3	1.3	8.6	3.0	2.1	1	1	1	2	2	2	0	Phosphoinositide-interacting	protein	family
ALAD	PF00490.21	gi|429216602|ref|YP_007174592.1|	-	7.8e-133	442.5	0.0	8.8e-133	442.4	0.0	1.0	1	0	0	1	1	1	1	Delta-aminolevulinic	acid	dehydratase
GlutR_N	PF05201.15	gi|429216603|ref|YP_007174593.1|	-	4.3e-32	110.9	0.1	1.1e-31	109.6	0.0	1.7	2	0	0	2	2	2	1	Glutamyl-tRNAGlu	reductase,	N-terminal	domain
Shikimate_DH	PF01488.20	gi|429216603|ref|YP_007174593.1|	-	1.9e-13	50.7	1.2	6.6e-13	48.9	1.2	2.0	1	1	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
GlutR_dimer	PF00745.20	gi|429216603|ref|YP_007174593.1|	-	7.6e-08	32.7	1.6	2.1e-07	31.3	1.6	1.8	1	0	0	1	1	1	1	Glutamyl-tRNAGlu	reductase,	dimerisation	domain
F420_oxidored	PF03807.17	gi|429216603|ref|YP_007174593.1|	-	6.5e-07	29.9	0.2	1.5e-06	28.7	0.2	1.7	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
Sacchrp_dh_NADP	PF03435.18	gi|429216603|ref|YP_007174593.1|	-	0.00017	21.8	0.5	0.00075	19.8	0.1	2.3	1	1	1	2	2	2	1	Saccharopine	dehydrogenase	NADP	binding	domain
NAD_binding_2	PF03446.15	gi|429216603|ref|YP_007174593.1|	-	0.0064	16.7	0.1	0.014	15.5	0.1	1.6	1	1	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
DapB_N	PF01113.20	gi|429216603|ref|YP_007174593.1|	-	0.044	13.9	0.1	0.11	12.6	0.1	1.8	1	1	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
OCD_Mu_crystall	PF02423.15	gi|429216603|ref|YP_007174593.1|	-	0.052	12.5	0.1	0.085	11.8	0.1	1.3	1	0	0	1	1	1	0	Ornithine	cyclodeaminase/mu-crystallin	family
SecY	PF00344.20	gi|429216604|ref|YP_007174594.1|	-	1.5e-58	198.5	24.0	2.1e-58	198.0	24.0	1.2	1	0	0	1	1	1	1	SecY	translocase
Plug_translocon	PF10559.9	gi|429216604|ref|YP_007174594.1|	-	1.1e-09	38.0	0.8	1.1e-09	38.0	0.8	2.2	2	0	0	2	2	2	1	Plug	domain	of	Sec61p
AAA_17	PF13207.6	gi|429216605|ref|YP_007174595.1|	-	1.3e-32	113.0	0.2	1.8e-32	112.6	0.2	1.1	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.6	gi|429216605|ref|YP_007174595.1|	-	1.3e-09	38.7	0.1	2.7e-09	37.7	0.1	1.6	1	1	0	1	1	1	1	AAA	domain
DnaB_C	PF03796.15	gi|429216605|ref|YP_007174595.1|	-	2.8e-05	23.6	0.6	4.5e-05	22.9	0.1	1.5	2	0	0	2	2	2	1	DnaB-like	helicase	C	terminal	domain
AAA_30	PF13604.6	gi|429216605|ref|YP_007174595.1|	-	4.6e-05	23.2	0.0	6.9e-05	22.6	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_28	PF13521.6	gi|429216605|ref|YP_007174595.1|	-	5.1e-05	23.6	0.1	0.00011	22.5	0.0	1.6	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.6	gi|429216605|ref|YP_007174595.1|	-	6.1e-05	23.5	0.1	9.5e-05	22.8	0.1	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
Thymidylate_kin	PF02223.17	gi|429216605|ref|YP_007174595.1|	-	0.0002	21.1	1.3	0.00079	19.1	1.1	2.0	1	1	0	1	1	1	1	Thymidylate	kinase
SRP54	PF00448.22	gi|429216605|ref|YP_007174595.1|	-	0.00027	20.6	0.1	0.00045	19.9	0.1	1.4	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
AAA_22	PF13401.6	gi|429216605|ref|YP_007174595.1|	-	0.00032	21.0	0.6	0.00074	19.8	0.3	1.9	1	1	1	2	2	2	1	AAA	domain
CPT	PF07931.12	gi|429216605|ref|YP_007174595.1|	-	0.00036	20.4	0.0	0.0004	20.3	0.0	1.2	1	0	0	1	1	1	1	Chloramphenicol	phosphotransferase-like	protein
NTPase_1	PF03266.15	gi|429216605|ref|YP_007174595.1|	-	0.00073	19.5	1.6	0.0012	18.8	0.8	1.8	2	0	0	2	2	2	1	NTPase
NACHT	PF05729.12	gi|429216605|ref|YP_007174595.1|	-	0.00092	19.2	0.0	0.0014	18.6	0.0	1.3	1	0	0	1	1	1	1	NACHT	domain
KTI12	PF08433.10	gi|429216605|ref|YP_007174595.1|	-	0.00097	18.7	0.2	0.0019	17.7	0.2	1.6	1	1	0	1	1	1	1	Chromatin	associated	protein	KTI12
DUF2075	PF09848.9	gi|429216605|ref|YP_007174595.1|	-	0.001	18.4	0.1	0.0019	17.5	0.1	1.4	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA	PF00004.29	gi|429216605|ref|YP_007174595.1|	-	0.001	19.5	1.9	0.0098	16.3	1.9	2.5	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_33	PF13671.6	gi|429216605|ref|YP_007174595.1|	-	0.001	19.2	0.2	0.0026	17.9	0.2	1.8	1	1	0	1	1	1	1	AAA	domain
DAP3	PF10236.9	gi|429216605|ref|YP_007174595.1|	-	0.0011	18.2	0.1	0.0019	17.4	0.1	1.4	1	0	0	1	1	1	1	Mitochondrial	ribosomal	death-associated	protein	3
6PF2K	PF01591.18	gi|429216605|ref|YP_007174595.1|	-	0.0024	17.2	1.0	0.0039	16.5	0.9	1.5	1	1	0	1	1	1	1	6-phosphofructo-2-kinase
AAA_14	PF13173.6	gi|429216605|ref|YP_007174595.1|	-	0.0029	17.6	4.1	0.084	12.9	3.9	2.4	1	1	0	1	1	1	1	AAA	domain
cobW	PF02492.19	gi|429216605|ref|YP_007174595.1|	-	0.0047	16.5	2.4	0.017	14.7	2.4	2.1	1	1	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
5_3_exonuc	PF01367.20	gi|429216605|ref|YP_007174595.1|	-	0.0059	17.2	1.6	0.01	16.4	0.3	2.0	2	1	0	2	2	2	1	5'-3'	exonuclease,	C-terminal	SAM	fold
ATP_bind_1	PF03029.17	gi|429216605|ref|YP_007174595.1|	-	0.0059	16.4	3.2	0.0087	15.9	0.4	2.3	1	1	1	2	2	2	1	Conserved	hypothetical	ATP	binding	protein
MeaB	PF03308.16	gi|429216605|ref|YP_007174595.1|	-	0.006	15.6	0.1	0.012	14.6	0.1	1.5	1	0	0	1	1	1	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
AAA_19	PF13245.6	gi|429216605|ref|YP_007174595.1|	-	0.0069	16.7	1.3	0.018	15.3	1.3	1.8	1	1	0	1	1	1	1	AAA	domain
Viral_helicase1	PF01443.18	gi|429216605|ref|YP_007174595.1|	-	0.012	15.3	0.4	0.024	14.4	0.4	1.6	1	1	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
Zeta_toxin	PF06414.12	gi|429216605|ref|YP_007174595.1|	-	0.019	14.2	0.7	0.073	12.3	0.1	2.2	3	0	0	3	3	3	0	Zeta	toxin
AAA_7	PF12775.7	gi|429216605|ref|YP_007174595.1|	-	0.02	14.4	0.2	0.042	13.4	0.2	1.6	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
APS_kinase	PF01583.20	gi|429216605|ref|YP_007174595.1|	-	0.021	14.7	0.6	0.14	12.0	0.1	2.1	2	0	0	2	2	2	0	Adenylylsulphate	kinase
MMR_HSR1	PF01926.23	gi|429216605|ref|YP_007174595.1|	-	0.028	14.5	1.5	0.08	13.0	1.5	1.9	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
Rad17	PF03215.15	gi|429216605|ref|YP_007174595.1|	-	0.049	13.5	0.3	0.087	12.7	0.0	1.6	2	0	0	2	2	2	0	Rad17	P-loop	domain
Sigma54_CBD	PF04963.13	gi|429216605|ref|YP_007174595.1|	-	0.055	13.3	1.1	0.093	12.6	1.1	1.6	1	1	0	1	1	1	0	Sigma-54	factor,	core	binding	domain
ABC_tran	PF00005.27	gi|429216605|ref|YP_007174595.1|	-	0.082	13.4	0.9	0.15	12.5	0.9	1.8	1	1	0	1	1	1	0	ABC	transporter
ATPase_2	PF01637.18	gi|429216605|ref|YP_007174595.1|	-	0.093	12.6	0.2	0.093	12.6	0.2	2.0	2	0	0	2	2	2	0	ATPase	domain	predominantly	from	Archaea
AAA_25	PF13481.6	gi|429216605|ref|YP_007174595.1|	-	0.095	12.3	0.3	0.73	9.4	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
CbiA	PF01656.23	gi|429216605|ref|YP_007174595.1|	-	0.099	12.7	0.2	0.12	12.4	0.2	1.2	1	0	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
T2SSE	PF00437.20	gi|429216605|ref|YP_007174595.1|	-	0.1	11.7	1.5	0.13	11.3	0.1	1.8	2	1	0	2	2	2	0	Type	II/IV	secretion	system	protein
RsgA_GTPase	PF03193.16	gi|429216605|ref|YP_007174595.1|	-	0.1	12.5	1.1	0.14	12.0	0.2	1.8	2	1	0	2	2	1	0	RsgA	GTPase
AAA_24	PF13479.6	gi|429216605|ref|YP_007174595.1|	-	0.12	12.1	0.4	0.15	11.8	0.4	1.6	1	1	0	1	1	1	0	AAA	domain
Nop10p	PF04135.12	gi|429216606|ref|YP_007174596.1|	-	1.6e-22	79.3	5.2	1.7e-22	79.2	5.2	1.0	1	0	0	1	1	1	1	Nucleolar	RNA-binding	protein,	Nop10p	family
DUF1272	PF06906.11	gi|429216606|ref|YP_007174596.1|	-	0.012	15.7	1.5	0.015	15.4	1.5	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1272)
zinc-ribbons_6	PF07191.12	gi|429216606|ref|YP_007174596.1|	-	0.015	15.3	0.5	0.021	14.8	0.5	1.1	1	0	0	1	1	1	0	zinc-ribbons
CpXC	PF14353.6	gi|429216606|ref|YP_007174596.1|	-	0.13	12.4	0.9	0.16	12.0	0.9	1.4	1	1	0	1	1	1	0	CpXC	protein
Ribosomal_L32p	PF01783.23	gi|429216606|ref|YP_007174596.1|	-	0.24	11.7	2.9	0.49	10.7	2.9	1.5	1	1	0	1	1	1	0	Ribosomal	L32p	protein	family
EIF_2_alpha	PF07541.12	gi|429216607|ref|YP_007174597.1|	-	1.5e-22	79.8	0.3	4e-22	78.5	0.1	1.8	2	0	0	2	2	2	1	Eukaryotic	translation	initiation	factor	2	alpha	subunit
S1	PF00575.23	gi|429216607|ref|YP_007174597.1|	-	4.4e-12	46.2	0.6	4.4e-12	46.2	0.6	1.8	2	0	0	2	2	2	1	S1	RNA	binding	domain
S1_2	PF13509.6	gi|429216607|ref|YP_007174597.1|	-	0.08	13.0	0.0	0.23	11.5	0.0	1.9	1	0	0	1	1	1	0	S1	domain
Rx_N	PF18052.1	gi|429216607|ref|YP_007174597.1|	-	0.21	11.9	2.1	0.32	11.3	0.7	2.0	2	1	0	2	2	2	0	Rx	N-terminal	domain
HTH_7	PF02796.15	gi|429216608|ref|YP_007174598.1|	-	0.029	14.5	0.1	0.072	13.2	0.1	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	resolvase
RibD_C	PF01872.17	gi|429216609|ref|YP_007174599.1|	-	1.2e-45	155.8	0.0	1.4e-45	155.6	0.0	1.0	1	0	0	1	1	1	1	RibD	C-terminal	domain
Radical_SAM	PF04055.21	gi|429216610|ref|YP_007174600.1|	-	2.2e-22	80.2	1.1	1.1e-20	74.7	0.0	2.4	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|429216610|ref|YP_007174600.1|	-	9.7e-09	35.4	0.7	3.5e-08	33.6	0.0	2.1	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.6	gi|429216610|ref|YP_007174600.1|	-	5.7e-07	29.9	1.4	9.3e-07	29.2	0.0	2.0	2	1	1	3	3	3	1	4Fe-4S	single	cluster	domain
Glycos_transf_2	PF00535.26	gi|429216612|ref|YP_007174602.1|	-	1e-33	116.5	0.1	1.5e-33	116.0	0.1	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
GtrA	PF04138.14	gi|429216612|ref|YP_007174602.1|	-	1.9e-25	89.3	6.6	1e-24	87.0	5.1	2.1	2	0	0	2	2	2	1	GtrA-like	protein
Glyco_tranf_2_3	PF13641.6	gi|429216612|ref|YP_007174602.1|	-	2.2e-11	44.1	0.0	3.3e-11	43.5	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.9	gi|429216612|ref|YP_007174602.1|	-	9.8e-07	28.5	1.3	1.3e-06	28.1	0.4	1.6	2	0	0	2	2	2	1	Glycosyltransferase	like	family	2
DUF166	PF02593.14	gi|429216612|ref|YP_007174602.1|	-	0.00089	18.9	1.5	0.0014	18.3	1.1	1.5	1	1	1	2	2	2	1	Domain	of	unknown	function
UMPH-1	PF05822.12	gi|429216612|ref|YP_007174602.1|	-	0.02	14.4	0.4	0.032	13.7	0.4	1.3	1	0	0	1	1	1	0	Pyrimidine	5'-nucleotidase	(UMPH-1)
Glyco_transf_7N	PF13733.6	gi|429216612|ref|YP_007174602.1|	-	0.068	12.8	0.0	0.12	12.0	0.0	1.4	1	0	0	1	1	1	0	N-terminal	region	of	glycosyl	transferase	group	7
Glyco_tranf_2_4	PF13704.6	gi|429216612|ref|YP_007174602.1|	-	0.11	13.0	0.0	0.34	11.4	0.0	1.8	2	0	0	2	2	2	0	Glycosyl	transferase	family	2
CitMHS	PF03600.16	gi|429216613|ref|YP_007174603.1|	-	2.2e-24	86.2	37.6	2.2e-24	86.2	37.6	2.1	1	1	1	2	2	2	1	Citrate	transporter
Na_sulph_symp	PF00939.19	gi|429216613|ref|YP_007174603.1|	-	2.2e-05	23.7	44.0	6.5e-05	22.2	20.6	2.4	2	1	0	2	2	2	2	Sodium:sulfate	symporter	transmembrane	region
DUF1160	PF06648.11	gi|429216614|ref|YP_007174604.1|	-	2.7	8.0	8.9	1.3	9.0	0.6	3.1	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1160)
DEAD	PF00270.29	gi|429216615|ref|YP_007174605.1|	-	8.1e-34	116.9	0.0	7.4e-33	113.8	0.0	2.5	3	0	0	3	3	3	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.31	gi|429216615|ref|YP_007174605.1|	-	1.1e-18	67.6	0.1	5.1e-15	55.8	0.1	2.8	2	0	0	2	2	2	2	Helicase	conserved	C-terminal	domain
DEAD_assoc	PF08494.11	gi|429216615|ref|YP_007174605.1|	-	1.4e-12	47.8	0.0	2.4e-05	24.2	0.0	2.5	1	1	1	2	2	2	2	DEAD/H	associated
ResIII	PF04851.15	gi|429216615|ref|YP_007174605.1|	-	1.6e-09	38.0	0.0	1.1e-08	35.3	0.0	2.4	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
AAA_25	PF13481.6	gi|429216615|ref|YP_007174605.1|	-	0.0013	18.4	0.0	0.0027	17.3	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
SNF2_N	PF00176.23	gi|429216615|ref|YP_007174605.1|	-	0.0047	15.7	0.0	0.0086	14.8	0.0	1.3	1	0	0	1	1	1	1	SNF2	family	N-terminal	domain
HTH_5	PF01022.20	gi|429216615|ref|YP_007174605.1|	-	0.016	15.0	0.0	0.04	13.8	0.0	1.7	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
HTH_Mga	PF08280.11	gi|429216615|ref|YP_007174605.1|	-	0.048	13.7	0.2	1.1	9.4	0.1	2.7	2	0	0	2	2	2	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
GerE	PF00196.19	gi|429216615|ref|YP_007174605.1|	-	0.049	13.2	0.0	0.15	11.6	0.0	1.8	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
HTH_40	PF14493.6	gi|429216615|ref|YP_007174605.1|	-	0.073	13.5	0.1	0.74	10.3	0.0	2.8	2	0	0	2	2	2	0	Helix-turn-helix	domain
AAA_11	PF13086.6	gi|429216615|ref|YP_007174605.1|	-	0.076	12.8	0.0	0.53	10.0	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
Glyoxalase	PF00903.25	gi|429216615|ref|YP_007174605.1|	-	0.16	12.1	0.0	0.52	10.5	0.0	1.8	2	0	0	2	2	2	0	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
DUF167	PF02594.16	gi|429216615|ref|YP_007174605.1|	-	0.18	12.0	0.7	2.4	8.4	0.1	2.8	3	0	0	3	3	3	0	Uncharacterised	ACR,	YggU	family	COG1872
DUF2207	PF09972.9	gi|429216616|ref|YP_007174606.1|	-	0.039	12.7	10.8	0.058	12.2	10.8	1.4	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
DUF4227	PF14004.6	gi|429216616|ref|YP_007174606.1|	-	0.38	10.8	4.2	0.44	10.6	1.9	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4227)
GHMP_kinases_N	PF00288.26	gi|429216617|ref|YP_007174607.1|	-	0.00024	21.3	0.0	0.00051	20.2	0.0	1.5	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
RHH_1	PF01402.21	gi|429216618|ref|YP_007174608.1|	-	5.1e-11	42.1	0.8	6.4e-11	41.8	0.8	1.2	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
RHH_8	PF17723.1	gi|429216618|ref|YP_007174608.1|	-	0.00045	20.4	0.0	0.00045	20.4	0.0	1.1	1	0	0	1	1	1	1	Ribbon-Helix-Helix	transcriptional	regulator	family
ParD_antitoxin	PF03693.14	gi|429216618|ref|YP_007174608.1|	-	0.00057	20.2	0.0	0.00058	20.2	0.0	1.2	1	0	0	1	1	1	1	Bacterial	antitoxin	of	ParD	toxin-antitoxin	type	II	system	and	RHH
VapB_antitoxin	PF09957.9	gi|429216618|ref|YP_007174608.1|	-	0.04	13.8	0.0	0.053	13.4	0.0	1.3	1	0	0	1	1	1	0	Bacterial	antitoxin	of	type	II	TA	system,	VapB
Prok-RING_1	PF14446.6	gi|429216619|ref|YP_007174609.1|	-	0.014	15.3	0.4	0.027	14.4	0.1	1.6	2	0	0	2	2	2	0	Prokaryotic	RING	finger	family	1
Ribosomal_L24e	PF01246.20	gi|429216619|ref|YP_007174609.1|	-	0.022	14.9	0.7	0.022	14.9	0.7	1.6	2	0	0	2	2	2	0	Ribosomal	protein	L24e
eIF3_subunit	PF08597.10	gi|429216619|ref|YP_007174609.1|	-	0.046	13.6	1.7	0.055	13.4	1.7	1.0	1	0	0	1	1	1	0	Translation	initiation	factor	eIF3	subunit
zf-H2C2_2	PF13465.6	gi|429216619|ref|YP_007174609.1|	-	0.051	14.0	0.2	0.051	14.0	0.2	1.8	2	0	0	2	2	2	0	Zinc-finger	double	domain
Vps39_2	PF10367.9	gi|429216619|ref|YP_007174609.1|	-	0.25	11.8	2.7	5.9	7.4	0.1	2.1	1	1	1	2	2	2	0	Vacuolar	sorting	protein	39	domain	2
DUF2175	PF09943.9	gi|429216619|ref|YP_007174609.1|	-	0.26	11.6	7.0	1.2	9.4	7.0	1.9	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2175)
MoaE	PF02391.17	gi|429216620|ref|YP_007174610.1|	-	3.5e-25	88.5	0.0	5.2e-25	87.9	0.0	1.3	1	0	0	1	1	1	1	MoaE	protein
ThiS	PF02597.20	gi|429216620|ref|YP_007174610.1|	-	5.2e-06	27.0	0.3	2.2e-05	25.0	0.0	2.2	2	1	1	3	3	3	1	ThiS	family
DUF1958	PF09211.10	gi|429216620|ref|YP_007174610.1|	-	0.021	15.1	0.1	0.052	13.9	0.1	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1958)
Urm1	PF09138.11	gi|429216620|ref|YP_007174610.1|	-	1.6	9.1	6.0	1.2	9.5	1.9	2.6	1	1	0	2	2	2	0	Urm1	(Ubiquitin	related	modifier)
Phage_Mu_Gam	PF07352.12	gi|429216621|ref|YP_007174611.1|	-	0.0051	16.7	0.5	0.0069	16.3	0.5	1.2	1	0	0	1	1	1	1	Bacteriophage	Mu	Gam	like	protein
KOW	PF00467.29	gi|429216621|ref|YP_007174611.1|	-	0.011	15.7	0.1	0.018	15.0	0.1	1.3	1	0	0	1	1	1	0	KOW	motif
Tn7_Tnp_TnsA_N	PF08722.11	gi|429216621|ref|YP_007174611.1|	-	0.049	13.8	0.1	0.06	13.5	0.1	1.1	1	0	0	1	1	1	0	TnsA	endonuclease	N	terminal
Peroxin-22	PF12827.7	gi|429216621|ref|YP_007174611.1|	-	0.06	13.3	0.3	0.072	13.0	0.3	1.1	1	0	0	1	1	1	0	Peroxisomal	biogenesis	protein	family
ECH_1	PF00378.20	gi|429216622|ref|YP_007174612.1|	-	2.4e-46	158.1	0.0	2.8e-46	157.9	0.0	1.1	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase
ECH_2	PF16113.5	gi|429216622|ref|YP_007174612.1|	-	3e-34	119.0	0.0	3.5e-34	118.8	0.0	1.1	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase
TBP	PF00352.21	gi|429216623|ref|YP_007174613.1|	-	3.4e-60	200.0	0.1	1.5e-30	104.9	0.0	2.1	2	0	0	2	2	2	2	Transcription	factor	TFIID	(or	TATA-binding	protein,	TBP)
DUF3378	PF11858.8	gi|429216623|ref|YP_007174613.1|	-	6.2e-07	29.4	0.0	0.014	15.5	0.0	2.4	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF3378)
PCNA_N	PF00705.18	gi|429216624|ref|YP_007174614.1|	-	2e-17	63.1	0.7	4.5e-14	52.2	0.0	3.0	2	1	1	3	3	3	2	Proliferating	cell	nuclear	antigen,	N-terminal	domain
PCNA_C	PF02747.15	gi|429216624|ref|YP_007174614.1|	-	6.2e-12	45.8	0.5	1.9e-11	44.2	0.1	2.0	2	1	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	C-terminal	domain
Rad1	PF02144.16	gi|429216624|ref|YP_007174614.1|	-	2.2e-06	27.0	1.7	0.00032	19.9	0.2	2.6	2	1	0	2	2	2	2	Repair	protein	Rad1/Rec1/Rad17
Rad9	PF04139.13	gi|429216624|ref|YP_007174614.1|	-	2.7e-05	23.8	0.6	7.1e-05	22.4	0.6	1.6	1	1	0	1	1	1	1	Rad9
Baculo_PP31	PF05311.11	gi|429216624|ref|YP_007174614.1|	-	0.072	12.6	0.2	0.11	12.0	0.2	1.2	1	0	0	1	1	1	0	Baculovirus	33KDa	late	protein	(PP31)
Receptor_IA-2	PF11548.8	gi|429216624|ref|YP_007174614.1|	-	0.12	12.4	0.0	0.48	10.4	0.0	2.1	1	1	1	2	2	2	0	Protein-tyrosine	phosphatase	receptor	IA-2
DNA_primase_S	PF01896.19	gi|429216625|ref|YP_007174615.1|	-	3.7e-11	43.4	0.0	1.3e-10	41.6	0.0	1.8	1	1	0	1	1	1	1	DNA	primase	small	subunit
Raf1_N	PF18578.1	gi|429216625|ref|YP_007174615.1|	-	0.15	12.5	0.0	2.8	8.5	0.0	2.4	2	0	0	2	2	2	0	Rubisco	accumulation	factor	1	alpha	helical	domain
Ribosomal_L44	PF00935.19	gi|429216627|ref|YP_007174617.1|	-	6.8e-28	97.0	7.6	6.8e-28	97.0	7.6	1.4	2	0	0	2	2	2	1	Ribosomal	protein	L44
RNA_POL_M_15KD	PF02150.16	gi|429216627|ref|YP_007174617.1|	-	0.0055	16.5	0.1	3.4	7.6	0.0	2.3	2	0	0	2	2	2	2	RNA	polymerases	M/15	Kd	subunit
zf-ribbon_3	PF13248.6	gi|429216627|ref|YP_007174617.1|	-	0.017	14.5	2.7	1.7	8.2	0.2	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
HNH_5	PF14279.6	gi|429216627|ref|YP_007174617.1|	-	0.033	14.1	0.7	0.48	10.3	0.0	2.2	2	0	0	2	2	2	0	HNH	endonuclease
WCCH	PF03716.14	gi|429216627|ref|YP_007174617.1|	-	0.047	13.4	0.3	0.085	12.5	0.3	1.4	1	0	0	1	1	1	0	WCCH	motif
Ribosomal_L33	PF00471.20	gi|429216627|ref|YP_007174617.1|	-	0.062	13.8	1.2	0.062	13.8	1.2	2.7	2	1	0	2	2	1	0	Ribosomal	protein	L33
zinc_ribbon_13	PF09855.9	gi|429216627|ref|YP_007174617.1|	-	0.062	13.5	1.2	2.1	8.6	0.1	2.2	2	0	0	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
IBR	PF01485.21	gi|429216627|ref|YP_007174617.1|	-	0.14	12.4	3.1	0.35	11.1	3.1	1.6	1	1	0	1	1	1	0	IBR	domain,	a	half	RING-finger	domain
Transposase_21	PF02992.14	gi|429216627|ref|YP_007174617.1|	-	0.16	11.2	1.0	0.19	11.0	1.0	1.2	1	0	0	1	1	1	0	Transposase	family	tnp2
zinc_ribbon_2	PF13240.6	gi|429216627|ref|YP_007174617.1|	-	0.18	11.6	5.4	3.8	7.4	0.4	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.6	gi|429216627|ref|YP_007174617.1|	-	0.3	11.0	3.7	3.1	7.8	0.2	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
zf_C2H2_10	PF18414.1	gi|429216627|ref|YP_007174617.1|	-	0.49	10.0	5.1	1.6	8.3	0.6	2.2	2	0	0	2	2	2	0	C2H2	type	zinc-finger
CpXC	PF14353.6	gi|429216627|ref|YP_007174617.1|	-	0.69	10.0	3.2	13	5.8	0.2	2.2	1	1	1	2	2	2	0	CpXC	protein
Elf1	PF05129.13	gi|429216627|ref|YP_007174617.1|	-	2.4	8.3	7.5	3	8.0	2.4	2.2	1	1	1	2	2	2	0	Transcription	elongation	factor	Elf1	like
Ribosomal_S27e	PF01667.17	gi|429216628|ref|YP_007174618.1|	-	7.5e-19	67.2	0.4	8.4e-19	67.0	0.4	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S27
TF_Zn_Ribbon	PF08271.12	gi|429216628|ref|YP_007174618.1|	-	2.6e-05	23.6	0.2	3.6e-05	23.2	0.2	1.2	1	0	0	1	1	1	1	TFIIB	zinc-binding
zf-ribbon_3	PF13248.6	gi|429216628|ref|YP_007174618.1|	-	0.00051	19.3	2.3	0.042	13.3	0.3	2.2	2	0	0	2	2	2	1	zinc-ribbon	domain
zinc_ribbon_2	PF13240.6	gi|429216628|ref|YP_007174618.1|	-	0.0017	18.0	0.6	0.11	12.3	0.1	2.2	2	0	0	2	2	2	1	zinc-ribbon	domain
Zn_Tnp_IS91	PF14319.6	gi|429216628|ref|YP_007174618.1|	-	0.0025	17.8	0.3	0.0029	17.6	0.3	1.1	1	0	0	1	1	1	1	Transposase	zinc-binding	domain
zf-C4_Topoisom	PF01396.19	gi|429216628|ref|YP_007174618.1|	-	0.0036	17.1	1.3	0.12	12.2	1.4	2.1	1	1	1	2	2	2	1	Topoisomerase	DNA	binding	C4	zinc	finger
DZR	PF12773.7	gi|429216628|ref|YP_007174618.1|	-	0.0042	17.1	0.2	0.0057	16.7	0.2	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
HypA	PF01155.19	gi|429216628|ref|YP_007174618.1|	-	0.011	15.8	0.0	0.011	15.7	0.0	1.1	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zf-RING_7	PF02591.15	gi|429216628|ref|YP_007174618.1|	-	0.013	15.7	0.3	1.3	9.2	0.0	2.3	2	0	0	2	2	2	0	C4-type	zinc	ribbon	domain
Zn_Tnp_IS1595	PF12760.7	gi|429216628|ref|YP_007174618.1|	-	0.02	14.9	0.8	0.025	14.6	0.8	1.2	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
DNA_RNApol_7kD	PF03604.13	gi|429216628|ref|YP_007174618.1|	-	0.024	14.3	0.4	0.72	9.6	0.1	2.2	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Lar_restr_allev	PF14354.6	gi|429216628|ref|YP_007174618.1|	-	0.042	14.2	0.2	0.054	13.9	0.2	1.2	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
DNA_ligase_ZBD	PF03119.16	gi|429216628|ref|YP_007174618.1|	-	0.052	13.6	2.5	3.8	7.6	0.0	2.2	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
OrfB_Zn_ribbon	PF07282.11	gi|429216628|ref|YP_007174618.1|	-	0.064	13.2	0.6	0.1	12.5	0.6	1.3	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
zinc_ribbon_4	PF13717.6	gi|429216628|ref|YP_007174618.1|	-	0.069	13.1	2.1	1.1	9.2	0.1	2.4	2	1	1	3	3	3	0	zinc-ribbon	domain
TFIIS_C	PF01096.18	gi|429216628|ref|YP_007174618.1|	-	0.089	12.7	2.9	0.2	11.5	0.3	2.1	1	1	1	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zinc_ribbon_6	PF14599.6	gi|429216628|ref|YP_007174618.1|	-	0.092	12.8	0.1	0.11	12.5	0.1	1.1	1	0	0	1	1	1	0	Zinc-ribbon
PADR1	PF08063.12	gi|429216628|ref|YP_007174618.1|	-	0.093	12.5	2.1	0.21	11.4	2.3	1.5	1	1	0	1	1	1	0	PADR1	(NUC008)	domain
zf-IS66	PF13005.7	gi|429216628|ref|YP_007174618.1|	-	0.1	13.0	1.0	12	6.4	0.1	2.2	2	0	0	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
DUF35_N	PF12172.8	gi|429216628|ref|YP_007174618.1|	-	0.1	12.5	2.1	9.6	6.2	0.0	2.4	3	0	0	3	3	3	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zinc_ribbon_13	PF09855.9	gi|429216628|ref|YP_007174618.1|	-	0.11	12.7	0.7	0.16	12.2	0.2	1.6	1	1	0	1	1	1	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
DUF1610	PF07754.11	gi|429216628|ref|YP_007174618.1|	-	0.13	12.2	9.0	2.8	8.0	0.3	2.5	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
Zn-ribbon_8	PF09723.10	gi|429216628|ref|YP_007174618.1|	-	0.16	12.1	2.1	0.62	10.2	2.2	1.8	1	1	1	2	2	2	0	Zinc	ribbon	domain
CpXC	PF14353.6	gi|429216628|ref|YP_007174618.1|	-	0.21	11.7	1.5	3.8	7.6	0.2	2.1	1	1	1	2	2	2	0	CpXC	protein
zf-NADH-PPase	PF09297.11	gi|429216628|ref|YP_007174618.1|	-	0.37	10.5	3.9	2.6	7.8	4.0	2.0	1	1	0	1	1	1	0	NADH	pyrophosphatase	zinc	ribbon	domain
Thioredoxin	PF00085.20	gi|429216629|ref|YP_007174619.1|	-	2.1e-21	75.9	0.1	2.9e-21	75.4	0.1	1.2	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.6	gi|429216629|ref|YP_007174619.1|	-	5.1e-08	33.3	0.0	1e-07	32.3	0.0	1.5	1	1	0	1	1	1	1	Thioredoxin-like	domain
OST3_OST6	PF04756.13	gi|429216629|ref|YP_007174619.1|	-	8.2e-08	31.9	0.2	9.5e-08	31.7	0.2	1.0	1	0	0	1	1	1	1	OST3	/	OST6	family,	transporter	family
Thioredoxin_8	PF13905.6	gi|429216629|ref|YP_007174619.1|	-	9.9e-06	25.8	1.2	0.015	15.6	0.1	2.7	1	1	2	3	3	3	2	Thioredoxin-like
Thioredoxin_7	PF13899.6	gi|429216629|ref|YP_007174619.1|	-	0.00056	20.0	0.1	0.00095	19.3	0.1	1.4	1	0	0	1	1	1	1	Thioredoxin-like
Thioredoxin_3	PF13192.6	gi|429216629|ref|YP_007174619.1|	-	0.0014	18.7	0.4	0.0035	17.4	0.1	1.8	1	1	1	2	2	2	1	Thioredoxin	domain
Thioredoxin_9	PF14595.6	gi|429216629|ref|YP_007174619.1|	-	0.0019	18.0	0.0	0.0023	17.7	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin
AhpC-TSA	PF00578.21	gi|429216629|ref|YP_007174619.1|	-	0.0025	17.7	0.8	0.041	13.8	0.1	2.0	1	1	0	2	2	2	1	AhpC/TSA	family
DUF2847	PF11009.8	gi|429216629|ref|YP_007174619.1|	-	0.0045	16.9	0.0	0.0075	16.2	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2847)
Thioredoxin_6	PF13848.6	gi|429216629|ref|YP_007174619.1|	-	0.014	15.3	1.8	0.14	12.0	1.2	2.0	1	1	1	2	2	2	0	Thioredoxin-like	domain
HyaE	PF07449.11	gi|429216629|ref|YP_007174619.1|	-	0.037	14.0	0.0	0.07	13.1	0.0	1.5	1	0	0	1	1	1	0	Hydrogenase-1	expression	protein	HyaE
RVT_3	PF13456.6	gi|429216629|ref|YP_007174619.1|	-	0.039	13.8	0.1	0.08	12.7	0.0	1.5	2	0	0	2	2	2	0	Reverse	transcriptase-like
Redoxin	PF08534.10	gi|429216629|ref|YP_007174619.1|	-	0.041	13.6	1.3	0.39	10.4	0.2	2.1	1	1	1	2	2	2	0	Redoxin
KRBA1	PF15287.6	gi|429216629|ref|YP_007174619.1|	-	0.14	11.9	0.0	0.25	11.1	0.0	1.3	1	0	0	1	1	1	0	KRBA1	family	repeat
DUF2205	PF10224.9	gi|429216629|ref|YP_007174619.1|	-	0.16	12.0	1.4	0.49	10.4	0.5	2.0	2	0	0	2	2	2	0	Short	coiled-coil	protein
Ribosomal_L15e	PF00827.17	gi|429216630|ref|YP_007174620.1|	-	4.1e-75	251.7	8.3	5e-75	251.4	8.3	1.1	1	0	0	1	1	1	1	Ribosomal	L15
RNA_binding	PF01877.17	gi|429216631|ref|YP_007174621.1|	-	2e-35	121.6	3.5	2.6e-35	121.2	3.5	1.1	1	0	0	1	1	1	1	RNA	binding
RNase_P_p30	PF01876.16	gi|429216632|ref|YP_007174622.1|	-	4.5e-08	32.8	2.6	5.3e-08	32.6	2.6	1.1	1	0	0	1	1	1	1	RNase	P	subunit	p30
DUF1699	PF08004.11	gi|429216632|ref|YP_007174622.1|	-	0.0057	16.3	1.0	0.01	15.5	1.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1699)
SANT_DAMP1_like	PF16282.5	gi|429216632|ref|YP_007174622.1|	-	0.011	15.9	0.5	1.7	8.9	0.0	2.5	2	1	0	2	2	2	0	SANT/Myb-like	domain	of	DAMP1
Methyltransf_23	PF13489.6	gi|429216632|ref|YP_007174622.1|	-	0.025	14.4	0.0	0.031	14.1	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
DUF3770	PF12603.8	gi|429216632|ref|YP_007174622.1|	-	0.47	9.9	4.8	4.7	6.6	0.5	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3770)
DUF1307	PF06998.11	gi|429216632|ref|YP_007174622.1|	-	0.66	10.0	4.6	1.3	9.0	4.6	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1307)
Intein_splicing	PF14890.6	gi|429216632|ref|YP_007174622.1|	-	1.2	9.1	4.5	3.3	7.6	4.6	1.8	1	1	0	1	1	1	0	Intein	splicing	domain
Thy1	PF02511.15	gi|429216633|ref|YP_007174623.1|	-	1.5e-60	204.3	1.0	2.1e-60	203.8	1.0	1.2	1	0	0	1	1	1	1	Thymidylate	synthase	complementing	protein
PHD_like	PF12910.7	gi|429216633|ref|YP_007174623.1|	-	0.11	12.5	0.1	0.22	11.6	0.1	1.4	1	0	0	1	1	1	0	Antitoxin	of	toxin-antitoxin,	RelE	/	RelB,	TA	system
PriX	PF18689.1	gi|429216634|ref|YP_007174624.1|	-	2.2e-44	149.8	4.3	2.2e-44	149.8	4.3	1.8	2	0	0	2	2	2	1	Primase	X
Phage_int_SAM_6	PF18644.1	gi|429216634|ref|YP_007174624.1|	-	0.0046	17.0	0.3	2.2	8.3	0.2	2.1	2	0	0	2	2	2	2	Phage	integrase	SAM-like	domain
DUF3196	PF11428.8	gi|429216634|ref|YP_007174624.1|	-	0.021	14.4	3.2	0.049	13.1	2.6	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3196)
ParD	PF09386.10	gi|429216634|ref|YP_007174624.1|	-	0.14	12.6	0.0	0.41	11.1	0.0	1.7	2	0	0	2	2	2	0	Antitoxin	ParD
DASH_Dad4	PF08650.10	gi|429216634|ref|YP_007174624.1|	-	0.93	9.5	6.2	0.64	10.0	3.6	2.1	2	0	0	2	2	2	0	DASH	complex	subunit	Dad4
eIF-6	PF01912.18	gi|429216635|ref|YP_007174625.1|	-	7.1e-71	237.7	3.1	8.4e-71	237.4	3.1	1.1	1	0	0	1	1	1	1	eIF-6	family
Ribosomal_L31e	PF01198.19	gi|429216636|ref|YP_007174626.1|	-	4.6e-12	46.0	0.1	6.1e-12	45.6	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L31e
Ribosomal_L39	PF00832.20	gi|429216637|ref|YP_007174627.1|	-	3e-19	68.3	6.9	3.7e-19	68.1	6.9	1.1	1	0	0	1	1	1	1	Ribosomal	L39	protein
dsDNA_bind	PF01984.20	gi|429216638|ref|YP_007174628.1|	-	1.1e-19	70.7	8.5	1.3e-19	70.5	8.5	1.0	1	0	0	1	1	1	1	Double-stranded	DNA-binding	domain
Radial_spoke_3	PF06098.11	gi|429216638|ref|YP_007174628.1|	-	0.0064	15.8	7.6	0.0077	15.5	7.6	1.0	1	0	0	1	1	1	1	Radial	spoke	protein	3
QRPTase_C	PF01729.19	gi|429216640|ref|YP_007174630.1|	-	2.6e-21	76.1	0.0	3.4e-21	75.7	0.0	1.2	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
NAPRTase_C	PF17956.1	gi|429216640|ref|YP_007174630.1|	-	0.00019	21.8	0.0	0.00034	21.0	0.0	1.4	1	0	0	1	1	1	1	Nicotinate	phosphoribosyltransferase	C-terminal	domain
QRPTase_N	PF02749.16	gi|429216640|ref|YP_007174630.1|	-	0.058	13.4	0.0	0.1	12.6	0.0	1.4	1	0	0	1	1	1	0	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
NAPRTase_N	PF17767.1	gi|429216640|ref|YP_007174630.1|	-	0.089	13.2	0.0	1.7	9.0	0.0	2.2	1	1	1	2	2	2	0	Nicotinate	phosphoribosyltransferase	(NAPRTase)	N-terminal	domain
DUF2627	PF11118.8	gi|429216641|ref|YP_007174631.1|	-	0.16	12.6	0.1	0.16	12.6	0.1	3.1	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2627)
ATPase	PF06745.13	gi|429216642|ref|YP_007174632.1|	-	5.1e-59	199.4	1.1	5.9e-59	199.2	1.1	1.0	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.6	gi|429216642|ref|YP_007174632.1|	-	4e-07	29.8	0.0	8.5e-07	28.7	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
Rad51	PF08423.11	gi|429216642|ref|YP_007174632.1|	-	1.7e-06	27.5	0.1	3.2e-06	26.6	0.1	1.5	1	1	0	1	1	1	1	Rad51
DnaB_C	PF03796.15	gi|429216642|ref|YP_007174632.1|	-	3.4e-05	23.3	0.2	8.2e-05	22.1	0.0	1.6	2	0	0	2	2	2	1	DnaB-like	helicase	C	terminal	domain
MEDS	PF14417.6	gi|429216642|ref|YP_007174632.1|	-	4.3e-05	23.4	0.0	6.8e-05	22.8	0.0	1.3	1	0	0	1	1	1	1	MEDS:	MEthanogen/methylotroph,	DcmR	Sensory	domain
IstB_IS21	PF01695.17	gi|429216642|ref|YP_007174632.1|	-	7.3e-05	22.6	0.1	0.00021	21.1	0.0	1.8	2	1	0	2	2	2	1	IstB-like	ATP	binding	protein
RecA	PF00154.21	gi|429216642|ref|YP_007174632.1|	-	9.4e-05	22.0	0.0	0.00013	21.5	0.0	1.2	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
GvpD	PF07088.11	gi|429216642|ref|YP_007174632.1|	-	0.00025	19.8	0.2	0.00056	18.7	0.1	1.6	1	1	1	2	2	2	1	GvpD	gas	vesicle	protein
AAA_22	PF13401.6	gi|429216642|ref|YP_007174632.1|	-	0.0081	16.4	0.0	0.015	15.6	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
PhoH	PF02562.16	gi|429216642|ref|YP_007174632.1|	-	0.017	14.6	0.1	0.031	13.7	0.1	1.4	1	1	0	1	1	1	0	PhoH-like	protein
DUF643	PF04867.12	gi|429216642|ref|YP_007174632.1|	-	0.023	15.3	2.3	15	6.2	1.5	2.9	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF643)
AAA_24	PF13479.6	gi|429216642|ref|YP_007174632.1|	-	0.024	14.4	0.3	0.052	13.3	0.3	1.5	1	1	0	1	1	1	0	AAA	domain
T2SSE	PF00437.20	gi|429216642|ref|YP_007174632.1|	-	0.055	12.5	0.2	0.14	11.2	0.0	1.7	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
AAA_14	PF13173.6	gi|429216642|ref|YP_007174632.1|	-	0.078	13.0	0.1	0.17	11.9	0.1	1.6	1	0	0	1	1	1	0	AAA	domain
Sigma54_activat	PF00158.26	gi|429216642|ref|YP_007174632.1|	-	0.12	12.1	0.0	0.2	11.3	0.0	1.3	1	0	0	1	1	1	0	Sigma-54	interaction	domain
PAXNEB	PF05625.11	gi|429216642|ref|YP_007174632.1|	-	0.13	11.4	0.0	0.32	10.1	0.0	1.6	1	1	1	2	2	2	0	PAXNEB	protein
ABC_tran	PF00005.27	gi|429216642|ref|YP_007174632.1|	-	0.14	12.7	0.1	0.38	11.2	0.1	1.7	1	1	0	1	1	1	0	ABC	transporter
Cys_Met_Meta_PP	PF01053.20	gi|429216643|ref|YP_007174633.1|	-	8.1e-107	357.1	0.0	9.2e-107	356.9	0.0	1.0	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Met_gamma_lyase	PF06838.11	gi|429216643|ref|YP_007174633.1|	-	0.00017	20.3	0.2	0.00056	18.5	0.2	1.8	1	1	0	1	1	1	1	Methionine	gamma-lyase
Aminotran_5	PF00266.19	gi|429216643|ref|YP_007174633.1|	-	0.00042	19.4	0.0	0.00056	19.0	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-V
GDC-P	PF02347.16	gi|429216643|ref|YP_007174633.1|	-	0.0011	17.9	0.0	0.0017	17.3	0.0	1.2	1	0	0	1	1	1	1	Glycine	cleavage	system	P-protein
Mga	PF05043.13	gi|429216643|ref|YP_007174633.1|	-	0.028	15.0	2.5	0.057	14.0	1.7	2.0	2	0	0	2	2	2	0	Mga	helix-turn-helix	domain
RabGAP-TBC	PF00566.18	gi|429216643|ref|YP_007174633.1|	-	0.077	12.6	0.4	0.13	11.9	0.4	1.3	1	0	0	1	1	1	0	Rab-GTPase-TBC	domain
Metallophos	PF00149.28	gi|429216644|ref|YP_007174634.1|	-	2e-08	35.0	0.7	1e-07	32.7	0.1	1.8	1	1	1	2	2	2	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|429216644|ref|YP_007174634.1|	-	1.6e-07	31.6	0.1	2.4e-07	31.1	0.1	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
NatB_MDM20	PF09797.9	gi|429216644|ref|YP_007174634.1|	-	0.081	11.8	0.2	0.11	11.4	0.2	1.1	1	0	0	1	1	1	0	N-acetyltransferase	B	complex	(NatB)	non	catalytic	subunit
PGM_PMM_I	PF02878.16	gi|429216645|ref|YP_007174635.1|	-	2.6e-37	127.6	0.1	1.7e-36	125.0	0.0	2.2	2	0	0	2	2	2	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_II	PF02879.16	gi|429216645|ref|YP_007174635.1|	-	9.3e-22	77.6	0.0	2.9e-21	76.0	0.0	1.8	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_IV	PF00408.20	gi|429216645|ref|YP_007174635.1|	-	2.2e-08	34.1	0.0	1.2e-07	31.8	0.0	2.1	2	0	0	2	2	2	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
PGM_PMM_III	PF02880.16	gi|429216645|ref|YP_007174635.1|	-	1.2e-06	28.7	0.0	2e-06	27.9	0.0	1.4	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
BRCT_2	PF16589.5	gi|429216645|ref|YP_007174635.1|	-	0.0035	17.7	0.3	0.62	10.5	0.2	2.6	2	0	0	2	2	2	1	BRCT	domain,	a	BRCA1	C-terminus	domain
Peptidase_S41	PF03572.18	gi|429216645|ref|YP_007174635.1|	-	0.063	12.8	0.0	0.13	11.8	0.0	1.5	1	0	0	1	1	1	0	Peptidase	family	S41
Spt4	PF06093.13	gi|429216648|ref|YP_007174638.1|	-	4e-13	49.3	0.4	4.8e-13	49.0	0.4	1.1	1	0	0	1	1	1	1	Spt4/RpoE2	zinc	finger
zf-ribbon_3	PF13248.6	gi|429216648|ref|YP_007174638.1|	-	1.4e-05	24.4	3.8	1.9e-05	23.9	3.8	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
zinc_ribbon_2	PF13240.6	gi|429216648|ref|YP_007174638.1|	-	2.4e-05	23.9	4.5	3.2e-05	23.5	4.5	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|429216648|ref|YP_007174638.1|	-	2.4e-05	24.3	1.5	3.3e-05	23.8	1.5	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
DUF35_N	PF12172.8	gi|429216648|ref|YP_007174638.1|	-	2.9e-05	23.8	0.1	4.2e-05	23.3	0.1	1.2	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zinc_ribbon_15	PF17032.5	gi|429216648|ref|YP_007174638.1|	-	0.00088	20.0	0.6	0.0014	19.3	0.6	1.3	1	0	0	1	1	1	1	zinc-ribbon	family
zf-RRN7	PF11781.8	gi|429216648|ref|YP_007174638.1|	-	0.00091	18.9	2.6	0.026	14.2	0.5	2.3	2	0	0	2	2	2	1	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
TF_Zn_Ribbon	PF08271.12	gi|429216648|ref|YP_007174638.1|	-	0.0019	17.7	3.3	0.051	13.1	0.4	2.2	1	1	1	2	2	2	1	TFIIB	zinc-binding
RecR	PF02132.15	gi|429216648|ref|YP_007174638.1|	-	0.0065	16.0	0.6	0.0099	15.4	0.6	1.3	1	0	0	1	1	1	1	RecR	protein
UPF0547	PF10571.9	gi|429216648|ref|YP_007174638.1|	-	0.0074	16.4	4.2	0.013	15.6	4.2	1.4	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
zf-C4H2	PF10146.9	gi|429216648|ref|YP_007174638.1|	-	0.012	16.0	5.3	0.018	15.4	5.3	1.3	1	0	0	1	1	1	0	Zinc	finger-containing	protein
Rubredoxin_2	PF18073.1	gi|429216648|ref|YP_007174638.1|	-	0.018	14.8	1.0	0.031	14.0	1.0	1.4	1	0	0	1	1	1	0	Rubredoxin	metal	binding	domain
HypA	PF01155.19	gi|429216648|ref|YP_007174638.1|	-	0.019	14.9	0.2	0.02	14.9	0.2	1.2	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Zn-ribbon_8	PF09723.10	gi|429216648|ref|YP_007174638.1|	-	0.044	13.9	3.1	0.61	10.3	3.1	2.2	1	1	0	1	1	1	0	Zinc	ribbon	domain
TackOD1	PF18551.1	gi|429216648|ref|YP_007174638.1|	-	0.057	13.1	0.1	0.058	13.1	0.1	1.2	1	0	0	1	1	1	0	Thaumarchaeal	output	domain	1
NRDD	PF13597.6	gi|429216648|ref|YP_007174638.1|	-	0.063	12.1	0.2	0.063	12.1	0.2	1.1	1	0	0	1	1	1	0	Anaerobic	ribonucleoside-triphosphate	reductase
ADK_lid	PF05191.14	gi|429216648|ref|YP_007174638.1|	-	0.13	12.2	4.6	2.2	8.3	4.6	2.2	1	1	0	1	1	1	0	Adenylate	kinase,	active	site	lid
zf-RanBP	PF00641.18	gi|429216648|ref|YP_007174638.1|	-	0.2	11.0	3.1	0.25	10.7	0.1	2.1	2	0	0	2	2	2	0	Zn-finger	in	Ran	binding	protein	and	others
YhfH	PF14149.6	gi|429216648|ref|YP_007174638.1|	-	0.56	10.2	4.7	26	4.9	4.8	2.3	1	1	1	2	2	2	0	YhfH-like	protein
DUF359	PF04019.12	gi|429216649|ref|YP_007174639.1|	-	7.4e-34	116.1	0.0	9.8e-34	115.7	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF359)
DUF3073	PF11273.8	gi|429216650|ref|YP_007174640.1|	-	0.1	13.3	0.1	0.14	12.9	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3073)
Nudix_N_2	PF14803.6	gi|429216651|ref|YP_007174641.1|	-	0.003	17.5	1.8	1.2	9.1	0.2	2.2	2	0	0	2	2	2	2	Nudix	N-terminal
Auto_anti-p27	PF06677.12	gi|429216651|ref|YP_007174641.1|	-	0.0084	16.3	0.8	4.4	7.6	0.0	2.6	3	0	0	3	3	3	2	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zf-dskA_traR	PF01258.17	gi|429216651|ref|YP_007174641.1|	-	0.07	13.1	0.8	7.6	6.6	0.1	2.2	2	0	0	2	2	2	0	Prokaryotic	dksA/traR	C4-type	zinc	finger
DZR	PF12773.7	gi|429216651|ref|YP_007174641.1|	-	0.076	13.1	0.3	0.37	10.9	0.3	1.9	1	1	0	1	1	1	0	Double	zinc	ribbon
zf-C3HC	PF07967.13	gi|429216651|ref|YP_007174641.1|	-	0.082	12.9	0.0	1.2	9.1	0.0	2.0	2	0	0	2	2	2	0	C3HC	zinc	finger-like
zf-ribbon_3	PF13248.6	gi|429216651|ref|YP_007174641.1|	-	0.083	12.3	2.2	1.6	8.3	0.2	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-NADH-PPase	PF09297.11	gi|429216651|ref|YP_007174641.1|	-	0.1	12.2	0.2	8.8	6.1	0.1	2.2	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
ADK_lid	PF05191.14	gi|429216651|ref|YP_007174641.1|	-	0.4	10.7	3.6	2.2	8.3	3.3	2.2	1	1	1	2	2	2	0	Adenylate	kinase,	active	site	lid
RIO1	PF01163.22	gi|429216652|ref|YP_007174642.1|	-	0.0021	17.7	0.0	0.0048	16.5	0.0	1.4	1	1	0	1	1	1	1	RIO1	family
Pkinase	PF00069.25	gi|429216652|ref|YP_007174642.1|	-	0.012	15.0	0.1	0.016	14.6	0.1	1.2	1	0	0	1	1	1	0	Protein	kinase	domain
Pkinase_Tyr	PF07714.17	gi|429216652|ref|YP_007174642.1|	-	0.048	12.9	0.0	0.069	12.4	0.0	1.1	1	0	0	1	1	1	0	Protein	tyrosine	kinase
tRNA_NucTransf2	PF09249.11	gi|429216653|ref|YP_007174643.1|	-	3.4e-38	130.4	0.0	6.7e-38	129.4	0.0	1.5	1	0	0	1	1	1	1	tRNA	nucleotidyltransferase,	second	domain
NTP_transf_2	PF01909.23	gi|429216653|ref|YP_007174643.1|	-	3.8e-10	39.9	0.2	1.8e-09	37.7	0.0	2.1	2	1	0	2	2	2	1	Nucleotidyltransferase	domain
MRF_C1	PF13887.6	gi|429216653|ref|YP_007174643.1|	-	0.14	11.3	0.2	0.35	10.1	0.2	1.6	1	0	0	1	1	1	0	Myelin	gene	regulatory	factor	-C-terminal	domain	1
LigT_PEase	PF02834.16	gi|429216654|ref|YP_007174644.1|	-	2.1e-28	98.3	0.0	4.3e-14	52.5	0.0	2.1	2	0	0	2	2	2	2	LigT	like	Phosphoesterase
AKAP7_NLS	PF10469.9	gi|429216654|ref|YP_007174644.1|	-	2e-13	50.7	0.7	4.2e-13	49.7	0.7	1.4	1	1	0	1	1	1	1	AKAP7	2'5'	RNA	ligase-like	domain
2_5_RNA_ligase2	PF13563.6	gi|429216654|ref|YP_007174644.1|	-	8.4e-10	38.7	0.0	1.1e-09	38.4	0.0	1.1	1	0	0	1	1	1	1	2'-5'	RNA	ligase	superfamily
UbiA	PF01040.18	gi|429216655|ref|YP_007174645.1|	-	2.7e-32	112.0	18.8	3.6e-32	111.7	18.8	1.2	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
MadM	PF03818.13	gi|429216655|ref|YP_007174645.1|	-	0.022	14.6	0.3	0.022	14.6	0.3	4.0	4	1	0	4	4	4	0	Malonate/sodium	symporter	MadM	subunit
GRAM	PF02893.20	gi|429216655|ref|YP_007174645.1|	-	0.092	12.6	0.0	0.17	11.8	0.0	1.3	1	0	0	1	1	1	0	GRAM	domain
Pcc1	PF09341.10	gi|429216656|ref|YP_007174646.1|	-	0.004	17.3	0.0	0.0042	17.2	0.0	1.1	1	0	0	1	1	1	1	Transcription	factor	Pcc1
Ribosomal_L37ae	PF01780.19	gi|429216658|ref|YP_007174648.1|	-	1e-29	102.5	1.7	1.1e-29	102.3	1.7	1.0	1	0	0	1	1	1	1	Ribosomal	L37ae	protein	family
Zn_Tnp_IS1595	PF12760.7	gi|429216658|ref|YP_007174648.1|	-	0.00016	21.6	0.9	0.00023	21.1	0.9	1.3	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
Lar_restr_allev	PF14354.6	gi|429216658|ref|YP_007174648.1|	-	0.00027	21.2	0.6	0.00043	20.6	0.6	1.3	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
PhnA_Zn_Ribbon	PF08274.12	gi|429216658|ref|YP_007174648.1|	-	0.00045	20.1	0.1	0.001	19.0	0.1	1.7	1	1	0	1	1	1	1	PhnA	Zinc-Ribbon
DUF4379	PF14311.6	gi|429216658|ref|YP_007174648.1|	-	0.00061	20.1	3.2	0.01	16.2	0.8	2.2	2	0	0	2	2	2	1	Probable	Zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|429216658|ref|YP_007174648.1|	-	0.00069	19.1	0.0	0.001	18.6	0.0	1.3	1	0	0	1	1	1	1	TFIIB	zinc-binding
OrfB_Zn_ribbon	PF07282.11	gi|429216658|ref|YP_007174648.1|	-	0.0027	17.6	0.6	0.0035	17.2	0.6	1.2	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Elf1	PF05129.13	gi|429216658|ref|YP_007174648.1|	-	0.0055	16.7	0.6	0.0086	16.1	0.6	1.4	1	1	0	1	1	1	1	Transcription	elongation	factor	Elf1	like
Zn-ribbon_8	PF09723.10	gi|429216658|ref|YP_007174648.1|	-	0.021	14.9	0.6	1.3	9.2	0.1	2.2	2	0	0	2	2	2	0	Zinc	ribbon	domain
Rubredoxin_2	PF18073.1	gi|429216658|ref|YP_007174648.1|	-	0.042	13.6	2.1	4.4	7.1	0.3	2.3	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
A2L_zn_ribbon	PF08792.10	gi|429216658|ref|YP_007174648.1|	-	0.051	13.3	5.3	1.7	8.5	0.2	2.2	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
zf-ribbon_3	PF13248.6	gi|429216658|ref|YP_007174648.1|	-	0.12	11.8	4.0	2.8	7.5	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
CpXC	PF14353.6	gi|429216658|ref|YP_007174648.1|	-	0.2	11.7	1.4	1.9	8.6	0.1	2.0	1	1	1	2	2	2	0	CpXC	protein
TFIIS_C	PF01096.18	gi|429216658|ref|YP_007174648.1|	-	0.26	11.2	4.8	0.88	9.5	1.1	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zinc_ribbon_4	PF13717.6	gi|429216658|ref|YP_007174648.1|	-	0.31	11.0	3.2	3.5	7.6	3.2	2.1	1	1	0	1	1	1	0	zinc-ribbon	domain
zinc_ribbon_10	PF10058.9	gi|429216658|ref|YP_007174648.1|	-	0.5	10.1	3.4	16	5.3	3.5	2.1	1	1	1	2	2	2	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
Prim_Zn_Ribbon	PF08273.12	gi|429216658|ref|YP_007174648.1|	-	0.56	10.5	7.3	6.3	7.2	7.3	2.1	1	1	0	1	1	1	0	Zinc-binding	domain	of	primase-helicase
zf-Sec23_Sec24	PF04810.15	gi|429216658|ref|YP_007174648.1|	-	1.1	9.3	5.4	14	5.8	1.1	2.2	1	1	1	2	2	2	0	Sec23/Sec24	zinc	finger
zinc_ribbon_2	PF13240.6	gi|429216658|ref|YP_007174648.1|	-	1.2	8.9	5.8	14	5.5	1.4	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
UPF0547	PF10571.9	gi|429216658|ref|YP_007174648.1|	-	3.2	7.9	7.3	5.1	7.3	0.3	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
RNase_PH	PF01138.21	gi|429216659|ref|YP_007174649.1|	-	2.1e-29	102.7	0.0	3.5e-29	102.0	0.0	1.4	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.15	gi|429216659|ref|YP_007174649.1|	-	9.6e-10	38.4	0.5	1.8e-09	37.5	0.5	1.5	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	2
DUF3215	PF11503.8	gi|429216659|ref|YP_007174649.1|	-	0.036	13.9	0.1	0.083	12.8	0.1	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3215)
DUF2283	PF10049.9	gi|429216659|ref|YP_007174649.1|	-	0.33	11.2	2.0	1.8	8.9	1.6	2.5	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2283)
RNase_PH	PF01138.21	gi|429216660|ref|YP_007174650.1|	-	6.7e-36	123.7	0.0	9.4e-36	123.2	0.0	1.2	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.15	gi|429216660|ref|YP_007174650.1|	-	3.2e-12	46.3	0.6	5.7e-12	45.5	0.6	1.5	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	2
KH_1	PF00013.29	gi|429216661|ref|YP_007174651.1|	-	5.8e-06	26.0	1.1	2.7e-05	23.9	1.1	2.2	1	1	0	1	1	1	1	KH	domain
KH_2	PF07650.17	gi|429216661|ref|YP_007174651.1|	-	1.1e-05	25.2	1.0	3.2e-05	23.7	0.9	2.0	1	1	0	1	1	1	1	KH	domain
KH_6	PF15985.5	gi|429216661|ref|YP_007174651.1|	-	3.5e-05	24.1	0.2	5.9e-05	23.3	0.2	1.4	1	0	0	1	1	1	1	KH	domain
DUF2345	PF10106.9	gi|429216661|ref|YP_007174651.1|	-	0.051	13.4	0.0	0.076	12.9	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2345)
SBDS	PF01172.18	gi|429216662|ref|YP_007174652.1|	-	3.2e-23	81.6	1.8	4.5e-23	81.1	0.5	1.9	2	0	0	2	2	2	1	Shwachman-Bodian-Diamond	syndrome	(SBDS)	protein
SBDS_C	PF09377.10	gi|429216662|ref|YP_007174652.1|	-	2.9e-22	78.9	0.5	4.8e-22	78.2	0.5	1.3	1	0	0	1	1	1	1	SBDS	protein	C-terminal	domain
EFG_C	PF00679.24	gi|429216662|ref|YP_007174652.1|	-	0.00015	21.7	0.0	0.00032	20.7	0.0	1.5	1	0	0	1	1	1	1	Elongation	factor	G	C-terminus
Proteasome	PF00227.26	gi|429216663|ref|YP_007174653.1|	-	1.7e-56	190.8	0.0	2.3e-56	190.3	0.0	1.1	1	0	0	1	1	1	1	Proteasome	subunit
Proteasome_A_N	PF10584.9	gi|429216663|ref|YP_007174653.1|	-	2.9e-12	46.0	0.7	9.1e-12	44.4	0.4	2.1	2	0	0	2	2	2	1	Proteasome	subunit	A	N-terminal	signature
PLCC	PF14466.6	gi|429216663|ref|YP_007174653.1|	-	0.086	13.0	0.0	0.27	11.4	0.0	1.8	1	1	0	1	1	1	0	PLAT/LH2	and	C2-like	Ca2+-binding	lipoprotein
Ribosomal_L24e	PF01246.20	gi|429216664|ref|YP_007174654.1|	-	4.6e-15	55.6	1.2	5.1e-15	55.4	1.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L24e
Ta0938	PF11494.8	gi|429216664|ref|YP_007174654.1|	-	0.066	13.5	0.1	0.066	13.5	0.1	1.1	1	0	0	1	1	1	0	Ta0938
Cyt_bd_oxida_I	PF01654.17	gi|429216665|ref|YP_007174655.1|	-	6.4e-18	64.6	30.9	3.4e-16	58.9	30.9	2.6	1	1	0	1	1	1	1	Cytochrome	bd	terminal	oxidase	subunit	I
Phage_holin_5_1	PF06946.11	gi|429216665|ref|YP_007174655.1|	-	0.78	10.2	0.1	0.78	10.2	0.1	3.6	4	1	0	4	4	4	0	Bacteriophage	A118-like	holin,	Hol118
Cyt_bd_oxida_I	PF01654.17	gi|429216666|ref|YP_007174656.1|	-	1.8e-70	237.7	25.9	8.4e-69	232.2	25.9	2.1	1	1	0	1	1	1	1	Cytochrome	bd	terminal	oxidase	subunit	I
DUF5305	PF17231.2	gi|429216666|ref|YP_007174656.1|	-	0.69	9.3	3.2	4.5	6.6	0.1	2.9	3	0	0	3	3	3	0	Family	of	unknown	function	(DUF5305)
zf-HIT	PF04438.16	gi|429216668|ref|YP_007174658.1|	-	0.0061	16.4	5.7	0.0061	16.4	5.7	4.0	3	1	0	3	3	3	1	HIT	zinc	finger
DUF3179	PF11376.8	gi|429216668|ref|YP_007174658.1|	-	0.28	10.5	0.3	0.37	10.1	0.3	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3179)
C6_DPF	PF10170.9	gi|429216668|ref|YP_007174658.1|	-	0.59	10.5	20.1	0.96	9.9	8.8	3.1	1	1	1	2	2	2	0	Cysteine-rich	domain
zf-B_box	PF00643.24	gi|429216668|ref|YP_007174658.1|	-	0.7	10.1	24.7	0.25	11.5	3.5	3.7	3	1	0	3	3	3	0	B-box	zinc	finger
Transp_Tc5_C	PF04236.15	gi|429216668|ref|YP_007174658.1|	-	7.2	7.0	21.3	1.4	9.3	6.0	2.8	1	1	2	3	3	3	0	Tc5	transposase	C-terminal	domain
FYVE	PF01363.21	gi|429216668|ref|YP_007174658.1|	-	7.8	6.7	26.7	13	6.0	21.8	3.5	1	1	1	2	2	2	0	FYVE	zinc	finger
Prok-RING_2	PF14445.6	gi|429216668|ref|YP_007174658.1|	-	9.9	6.4	21.4	0.51	10.5	6.7	2.5	1	1	1	2	2	2	0	Prokaryotic	RING	finger	family	2
YbbR	PF07949.12	gi|429216669|ref|YP_007174659.1|	-	0.072	13.4	1.9	0.2	12.0	0.5	2.3	2	1	0	2	2	2	0	YbbR-like	protein
Lactamase_B	PF00753.27	gi|429216671|ref|YP_007174661.1|	-	3.2e-15	56.6	0.0	1.6e-14	54.4	0.0	1.9	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|429216671|ref|YP_007174661.1|	-	2e-06	27.4	0.0	3.2e-06	26.8	0.0	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.6	gi|429216671|ref|YP_007174661.1|	-	0.00015	21.7	0.1	0.00034	20.5	0.0	1.6	2	0	0	2	2	2	1	Beta-lactamase	superfamily	domain
NTP_transferase	PF00483.23	gi|429216672|ref|YP_007174662.1|	-	4.7e-28	98.4	0.0	6.7e-28	97.9	0.0	1.2	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.7	gi|429216672|ref|YP_007174662.1|	-	1.6e-11	44.8	0.0	2.2e-11	44.4	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep	PF00132.24	gi|429216672|ref|YP_007174662.1|	-	4.7e-11	42.0	13.5	0.00079	19.1	1.1	4.4	4	0	0	4	4	4	3	Bacterial	transferase	hexapeptide	(six	repeats)
CTP_transf_3	PF02348.19	gi|429216672|ref|YP_007174662.1|	-	0.037	13.9	0.0	0.065	13.1	0.0	1.3	1	0	0	1	1	1	0	Cytidylyltransferase
IspD	PF01128.19	gi|429216672|ref|YP_007174662.1|	-	0.041	13.6	0.0	0.067	12.9	0.0	1.3	1	0	0	1	1	1	0	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
Hexapep_2	PF14602.6	gi|429216672|ref|YP_007174662.1|	-	8.6	6.2	9.2	47	3.8	0.5	4.2	4	0	0	4	4	4	0	Hexapeptide	repeat	of	succinyl-transferase
Ribosomal_S3Ae	PF01015.18	gi|429216674|ref|YP_007174664.1|	-	5.9e-63	212.1	7.6	6.9e-63	211.9	7.6	1.0	1	0	0	1	1	1	1	Ribosomal	S3Ae	family
Thioredoxin_15	PF18403.1	gi|429216674|ref|YP_007174664.1|	-	0.018	15.0	0.1	0.026	14.4	0.1	1.2	1	0	0	1	1	1	0	Thioredoxin-like	domain
Antimicrobial_7	PF08102.11	gi|429216674|ref|YP_007174664.1|	-	0.1	12.9	2.0	0.56	10.5	0.8	2.3	2	0	0	2	2	2	0	Scorpion	antimicrobial	peptide
Ribosomal_S13_N	PF08069.12	gi|429216677|ref|YP_007174667.1|	-	1.5e-20	72.9	0.0	2.5e-20	72.3	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	S13/S15	N-terminal	domain
Ribosomal_S15	PF00312.22	gi|429216677|ref|YP_007174667.1|	-	1.1e-14	54.4	0.1	1.6e-14	53.9	0.1	1.3	1	0	0	1	1	1	1	Ribosomal	protein	S15
YflT	PF11181.8	gi|429216677|ref|YP_007174667.1|	-	0.14	12.7	0.0	0.23	12.0	0.0	1.6	1	1	0	1	1	1	0	Heat	induced	stress	protein	YflT
NDK	PF00334.19	gi|429216678|ref|YP_007174668.1|	-	3.2e-55	185.8	0.0	3.6e-55	185.7	0.0	1.0	1	0	0	1	1	1	1	Nucleoside	diphosphate	kinase
GTP_EFTU_D4	PF14578.6	gi|429216679|ref|YP_007174669.1|	-	6.3e-38	128.6	1.1	2.2e-37	126.8	1.1	2.0	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	4
GTP_EFTU	PF00009.27	gi|429216679|ref|YP_007174669.1|	-	3.1e-29	101.9	0.0	1e-28	100.3	0.0	1.8	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
IF-2	PF11987.8	gi|429216679|ref|YP_007174669.1|	-	1.3e-21	76.7	3.0	3.4e-21	75.3	3.0	1.8	1	0	0	1	1	1	1	Translation-initiation	factor	2
GTP_EFTU_D2	PF03144.25	gi|429216679|ref|YP_007174669.1|	-	3.4e-11	43.4	2.2	2.7e-10	40.5	0.0	2.6	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.23	gi|429216679|ref|YP_007174669.1|	-	7.1e-07	29.3	1.2	6.2e-06	26.3	0.0	2.6	2	1	0	2	2	2	1	50S	ribosome-binding	GTPase
Roc	PF08477.13	gi|429216679|ref|YP_007174669.1|	-	0.0058	16.8	0.0	0.012	15.8	0.0	1.6	1	0	0	1	1	1	1	Ras	of	Complex,	Roc,	domain	of	DAPkinase
Dynamin_N	PF00350.23	gi|429216679|ref|YP_007174669.1|	-	0.024	14.7	0.5	0.33	11.0	0.0	2.8	3	0	0	3	3	3	0	Dynamin	family
Ras	PF00071.22	gi|429216679|ref|YP_007174669.1|	-	0.048	13.3	0.0	0.42	10.2	0.0	2.3	1	1	0	1	1	1	0	Ras	family
ApoLp-III	PF07464.11	gi|429216679|ref|YP_007174669.1|	-	0.1	12.7	0.7	0.36	10.9	0.1	2.2	2	0	0	2	2	2	0	Apolipophorin-III	precursor	(apoLp-III)
RsgA_GTPase	PF03193.16	gi|429216679|ref|YP_007174669.1|	-	0.17	11.8	1.6	7.4	6.4	0.0	3.5	3	1	0	4	4	4	0	RsgA	GTPase
Cbl_N2	PF02761.14	gi|429216681|ref|YP_007174671.1|	-	0.19	12.4	0.0	0.22	12.3	0.0	1.1	1	0	0	1	1	1	0	CBL	proto-oncogene	N-terminus,	EF	hand-like	domain
Ribosomal_S6e	PF01092.19	gi|429216682|ref|YP_007174672.1|	-	7.7e-25	87.3	0.4	9.3e-24	83.8	0.0	2.5	2	1	1	3	3	3	1	Ribosomal	protein	S6e
DUF1233	PF06806.12	gi|429216682|ref|YP_007174672.1|	-	0.16	11.6	0.0	0.36	10.5	0.0	1.6	1	0	0	1	1	1	0	Putative	excisionase	(DUF1233)
DUF5643	PF18705.1	gi|429216683|ref|YP_007174673.1|	-	0.01	15.8	0.2	0.85	9.6	0.0	2.3	1	1	1	2	2	2	0	Family	of	unknown	function	(DUF5643)
tRNA-synt_1	PF00133.22	gi|429216684|ref|YP_007174674.1|	-	3.4e-65	220.5	9.7	2.8e-64	217.4	6.9	3.0	2	1	0	2	2	2	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1g	PF09334.11	gi|429216684|ref|YP_007174674.1|	-	1.5e-23	83.2	6.2	1.9e-11	43.4	0.0	4.3	3	1	0	3	3	3	2	tRNA	synthetases	class	I	(M)
Anticodon_1	PF08264.13	gi|429216684|ref|YP_007174674.1|	-	5.5e-22	78.4	5.1	5.5e-22	78.4	5.1	2.4	2	0	0	2	2	2	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1_2	PF13603.6	gi|429216684|ref|YP_007174674.1|	-	6.1e-14	51.9	3.6	1.6e-13	50.5	0.8	2.4	1	1	1	2	2	2	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1e	PF01406.19	gi|429216684|ref|YP_007174674.1|	-	1.2e-09	37.9	3.9	4.3e-06	26.3	0.0	3.3	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(C)	catalytic	domain
SL4P	PF17618.2	gi|429216684|ref|YP_007174674.1|	-	0.059	13.4	4.2	0.059	13.4	1.7	2.3	2	0	0	2	2	2	0	Uncharacterized	Strongylid	L4	protein
DUF3212	PF11486.8	gi|429216684|ref|YP_007174674.1|	-	0.67	10.0	4.8	3.4	7.7	0.1	2.9	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3212)
HD_3	PF13023.6	gi|429216685|ref|YP_007174675.1|	-	2.8e-16	59.9	0.0	4.3e-16	59.3	0.0	1.3	1	1	0	1	1	1	1	HD	domain
HD_2	PF12917.7	gi|429216685|ref|YP_007174675.1|	-	2.7e-09	37.0	0.8	1e-08	35.1	0.8	1.8	1	1	0	1	1	1	1	HD	containing	hydrolase-like	enzyme
HD	PF01966.22	gi|429216685|ref|YP_007174675.1|	-	7.5e-05	22.9	0.1	0.00021	21.5	0.1	1.7	1	1	0	1	1	1	1	HD	domain
HDOD	PF08668.12	gi|429216685|ref|YP_007174675.1|	-	0.00092	18.7	0.0	0.0013	18.2	0.0	1.3	1	0	0	1	1	1	1	HDOD	domain
SLATT_6	PF18169.1	gi|429216685|ref|YP_007174675.1|	-	0.034	13.7	4.4	1	9.0	0.6	2.4	1	1	1	2	2	2	0	SMODS	and	SLOG-associating	2TM	effector	domain	6
DZR	PF12773.7	gi|429216686|ref|YP_007174676.1|	-	0.14	12.2	0.1	0.25	11.4	0.1	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
HscB_4_cys	PF18256.1	gi|429216686|ref|YP_007174676.1|	-	0.32	10.9	1.5	0.92	9.4	0.6	2.0	2	0	0	2	2	2	0	Co-chaperone	HscB	tetracysteine	metal	binding	motif
Radical_SAM	PF04055.21	gi|429216687|ref|YP_007174677.1|	-	5.9e-20	72.3	0.0	1.5e-19	71.0	0.0	1.7	2	0	0	2	2	2	1	Radical	SAM	superfamily
DZR	PF12773.7	gi|429216687|ref|YP_007174677.1|	-	0.0033	17.4	0.1	0.0033	17.4	0.1	2.4	3	0	0	3	3	2	1	Double	zinc	ribbon
Fer4_12	PF13353.6	gi|429216687|ref|YP_007174677.1|	-	0.0057	16.9	0.0	0.011	16.0	0.0	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
NRDD	PF13597.6	gi|429216687|ref|YP_007174677.1|	-	0.0065	15.3	0.1	0.015	14.1	0.1	1.5	1	0	0	1	1	1	1	Anaerobic	ribonucleoside-triphosphate	reductase
zinc_ribbon_2	PF13240.6	gi|429216687|ref|YP_007174677.1|	-	0.0098	15.6	11.2	0.079	12.7	0.3	3.1	3	0	0	3	3	2	2	zinc-ribbon	domain
zinc_ribbon_9	PF14369.6	gi|429216687|ref|YP_007174677.1|	-	0.016	15.4	0.7	4.9	7.5	0.0	3.3	3	0	0	3	3	3	0	zinc-ribbon
zf-ribbon_3	PF13248.6	gi|429216687|ref|YP_007174677.1|	-	0.017	14.5	7.8	0.9	9.0	0.1	3.1	3	0	0	3	3	3	0	zinc-ribbon	domain
zf_Rg	PF17915.1	gi|429216687|ref|YP_007174677.1|	-	0.061	12.7	0.8	3.3	7.2	0.0	3.2	3	0	0	3	3	3	0	Reverse	gyrase	zinc	finger
DNA_ligase_ZBD	PF03119.16	gi|429216687|ref|YP_007174677.1|	-	0.067	13.2	0.5	17	5.5	0.0	2.7	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Fer4_14	PF13394.6	gi|429216687|ref|YP_007174677.1|	-	0.13	12.5	0.1	0.71	10.0	0.0	2.1	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
zf-4CXXC_R1	PF10497.9	gi|429216687|ref|YP_007174677.1|	-	0.27	11.5	2.8	0.3	11.3	0.0	2.2	2	0	0	2	2	2	0	Zinc-finger	domain	of	monoamine-oxidase	A	repressor	R1
zf-C4_Topoisom	PF01396.19	gi|429216687|ref|YP_007174677.1|	-	0.28	11.0	0.0	0.28	11.0	0.0	2.8	3	0	0	3	3	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
NOB1_Zn_bind	PF08772.11	gi|429216687|ref|YP_007174677.1|	-	0.61	10.3	0.0	0.61	10.3	0.0	2.9	2	1	1	3	3	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
GFA	PF04828.14	gi|429216687|ref|YP_007174677.1|	-	1.1	9.7	6.1	3.2	8.1	0.0	3.5	3	1	1	4	4	4	0	Glutathione-dependent	formaldehyde-activating	enzyme
zf-NADH-PPase	PF09297.11	gi|429216687|ref|YP_007174677.1|	-	1.5	8.5	9.1	2.6	7.8	0.0	2.8	3	0	0	3	3	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
Auto_anti-p27	PF06677.12	gi|429216687|ref|YP_007174677.1|	-	1.6	9.0	10.7	0.085	13.0	2.3	2.8	2	1	0	2	2	1	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zinc-ribbons_6	PF07191.12	gi|429216687|ref|YP_007174677.1|	-	3.4	7.7	7.0	2.9	7.9	0.1	3.2	3	1	0	3	3	3	0	zinc-ribbons
TF_Zn_Ribbon	PF08271.12	gi|429216687|ref|YP_007174677.1|	-	6.4	6.4	7.7	4.1	7.0	2.0	3.0	2	1	0	2	2	2	0	TFIIB	zinc-binding
zf-FPG_IleRS	PF06827.14	gi|429216687|ref|YP_007174677.1|	-	8.6	6.3	10.5	1.2	9.0	0.3	3.3	3	0	0	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
RNA_POL_M_15KD	PF02150.16	gi|429216688|ref|YP_007174678.1|	-	2.9e-08	33.4	0.8	5.5e-08	32.5	0.8	1.5	1	0	0	1	1	1	1	RNA	polymerases	M/15	Kd	subunit
zf-TFIIB	PF13453.6	gi|429216688|ref|YP_007174678.1|	-	0.0004	19.7	0.5	0.00086	18.6	0.5	1.7	1	0	0	1	1	1	1	Transcription	factor	zinc-finger
zinc_ribbon_2	PF13240.6	gi|429216688|ref|YP_007174678.1|	-	0.00089	18.9	4.4	0.36	10.6	0.1	2.4	2	0	0	2	2	2	2	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.11	gi|429216688|ref|YP_007174678.1|	-	0.00092	19.1	0.2	0.0017	18.2	0.1	1.5	1	1	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Zn_ribbon_recom	PF13408.6	gi|429216688|ref|YP_007174678.1|	-	0.001	19.5	4.0	0.23	12.0	0.3	2.3	1	1	1	2	2	2	2	Recombinase	zinc	beta	ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|429216688|ref|YP_007174678.1|	-	0.0019	17.7	2.1	0.0068	15.9	2.1	2.0	1	1	0	1	1	1	1	TFIIB	zinc-binding
Lar_restr_allev	PF14354.6	gi|429216688|ref|YP_007174678.1|	-	0.0027	18.0	1.0	0.0044	17.4	1.0	1.6	1	1	0	1	1	1	1	Restriction	alleviation	protein	Lar
DZR	PF12773.7	gi|429216688|ref|YP_007174678.1|	-	0.004	17.1	0.4	0.0061	16.6	0.4	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-NADH-PPase	PF09297.11	gi|429216688|ref|YP_007174678.1|	-	0.0049	16.5	3.0	0.065	12.9	3.0	2.1	1	1	0	1	1	1	1	NADH	pyrophosphatase	zinc	ribbon	domain
Zn_Tnp_IS1595	PF12760.7	gi|429216688|ref|YP_007174678.1|	-	0.018	15.0	0.3	0.031	14.3	0.3	1.3	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
IBR	PF01485.21	gi|429216688|ref|YP_007174678.1|	-	0.019	15.2	0.6	0.04	14.1	0.6	1.5	1	0	0	1	1	1	0	IBR	domain,	a	half	RING-finger	domain
Zn-ribbon_8	PF09723.10	gi|429216688|ref|YP_007174678.1|	-	0.02	15.0	0.7	3.2	7.9	0.1	2.4	2	0	0	2	2	2	0	Zinc	ribbon	domain
zinc_ribbon_4	PF13717.6	gi|429216688|ref|YP_007174678.1|	-	0.024	14.5	1.0	0.78	9.7	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|429216688|ref|YP_007174678.1|	-	0.029	13.8	3.8	0.3	10.5	0.3	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
A2L_zn_ribbon	PF08792.10	gi|429216688|ref|YP_007174678.1|	-	0.048	13.4	1.1	5.7	6.8	0.2	2.5	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
zf-IS66	PF13005.7	gi|429216688|ref|YP_007174678.1|	-	0.049	14.0	0.6	1.3	9.5	0.1	2.4	2	0	0	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
Elf1	PF05129.13	gi|429216688|ref|YP_007174678.1|	-	0.058	13.4	0.8	0.12	12.4	0.7	1.6	1	1	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
DUF2387	PF09526.10	gi|429216688|ref|YP_007174678.1|	-	0.069	13.3	3.0	0.2	11.8	3.0	1.9	1	1	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
eIF-5_eIF-2B	PF01873.17	gi|429216688|ref|YP_007174678.1|	-	0.08	12.8	2.8	0.1	12.5	0.5	1.9	2	0	0	2	2	2	0	Domain	found	in	IF2B/IF5
DNA_ligase_ZBD	PF03119.16	gi|429216688|ref|YP_007174678.1|	-	0.091	12.8	0.3	0.25	11.4	0.3	1.8	1	1	0	1	1	1	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
C1_1	PF00130.22	gi|429216688|ref|YP_007174678.1|	-	0.097	12.6	0.6	0.15	12.0	0.6	1.3	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
RuvA_N	PF01330.21	gi|429216688|ref|YP_007174678.1|	-	0.098	12.8	0.1	0.17	12.0	0.1	1.4	1	0	0	1	1	1	0	RuvA	N	terminal	domain
YhfH	PF14149.6	gi|429216688|ref|YP_007174678.1|	-	0.1	12.6	1.8	3.1	7.8	0.1	2.4	2	0	0	2	2	2	0	YhfH-like	protein
Anti-TRAP	PF15777.5	gi|429216688|ref|YP_007174678.1|	-	0.25	11.3	2.2	0.62	10.1	2.1	1.7	1	1	0	1	1	1	0	Tryptophan	RNA-binding	attenuator	protein	inhibitory	protein
DNA_RNApol_7kD	PF03604.13	gi|429216688|ref|YP_007174678.1|	-	0.29	10.8	2.6	0.72	9.6	2.6	1.7	1	1	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Nudix_N_2	PF14803.6	gi|429216688|ref|YP_007174678.1|	-	0.44	10.5	4.7	5.5	7.0	5.0	2.1	1	1	1	2	2	2	0	Nudix	N-terminal
FYDLN_acid	PF09538.10	gi|429216688|ref|YP_007174678.1|	-	0.48	11.1	8.1	3.2	8.5	8.1	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(FYDLN_acid)
zf-ISL3	PF14690.6	gi|429216688|ref|YP_007174678.1|	-	0.64	10.7	3.7	0.94	10.2	0.4	2.1	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Ogr_Delta	PF04606.12	gi|429216688|ref|YP_007174678.1|	-	1.4	8.9	4.0	14	5.7	0.1	2.6	3	0	0	3	3	2	0	Ogr/Delta-like	zinc	finger
zinc_ribbon_5	PF13719.6	gi|429216688|ref|YP_007174678.1|	-	7.9	6.3	6.6	87	3.0	6.6	2.2	1	1	0	1	1	1	0	zinc-ribbon	domain
NOB1_Zn_bind	PF08772.11	gi|429216688|ref|YP_007174678.1|	-	8.8	6.6	7.0	9.8	6.4	1.0	2.4	1	1	1	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
NTP_transferase	PF00483.23	gi|429216689|ref|YP_007174679.1|	-	1e-36	126.8	0.0	1.3e-36	126.4	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.7	gi|429216689|ref|YP_007174679.1|	-	3.5e-11	43.7	0.0	4.4e-11	43.4	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
AhpC-TSA	PF00578.21	gi|429216690|ref|YP_007174680.1|	-	4.3e-38	130.0	0.0	5.6e-38	129.6	0.0	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.10	gi|429216690|ref|YP_007174680.1|	-	7.7e-26	90.6	0.0	9.1e-26	90.3	0.0	1.0	1	0	0	1	1	1	1	Redoxin
SCO1-SenC	PF02630.14	gi|429216690|ref|YP_007174680.1|	-	9.1e-05	22.4	0.1	0.00032	20.6	0.1	1.8	1	1	0	1	1	1	1	SCO1/SenC
AhpC-TSA_2	PF13911.6	gi|429216690|ref|YP_007174680.1|	-	0.00012	22.1	0.0	0.00016	21.8	0.0	1.2	1	0	0	1	1	1	1	AhpC/TSA	antioxidant	enzyme
DUF899	PF05988.12	gi|429216690|ref|YP_007174680.1|	-	0.001	18.6	0.0	0.0011	18.5	0.0	1.1	1	0	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF899)
GSHPx	PF00255.19	gi|429216690|ref|YP_007174680.1|	-	0.0012	18.4	0.1	0.0041	16.7	0.1	1.8	1	1	0	1	1	1	1	Glutathione	peroxidase
DAHP_snth_FXD	PF18152.1	gi|429216690|ref|YP_007174680.1|	-	0.11	12.3	0.0	0.22	11.4	0.0	1.4	1	0	0	1	1	1	0	DAHP	synthase	ferredoxin-like	domain
GTP_EFTU	PF00009.27	gi|429216691|ref|YP_007174681.1|	-	6.7e-31	107.3	0.0	3.2e-30	105.1	0.0	1.9	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
eIF2_C	PF09173.11	gi|429216691|ref|YP_007174681.1|	-	8.6e-31	106.0	0.6	1.9e-30	105.0	0.6	1.6	1	0	0	1	1	1	1	Initiation	factor	eIF2	gamma,	C	terminal
GTP_EFTU_D2	PF03144.25	gi|429216691|ref|YP_007174681.1|	-	3.8e-09	36.8	0.5	5.7e-08	33.0	0.4	2.7	3	0	0	3	3	3	1	Elongation	factor	Tu	domain	2
RsgA_GTPase	PF03193.16	gi|429216691|ref|YP_007174681.1|	-	3.6e-06	27.0	0.3	0.00025	21.0	0.1	2.2	2	0	0	2	2	2	1	RsgA	GTPase
MMR_HSR1	PF01926.23	gi|429216691|ref|YP_007174681.1|	-	6.8e-05	22.9	0.0	0.00015	21.8	0.0	1.7	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
PduV-EutP	PF10662.9	gi|429216691|ref|YP_007174681.1|	-	0.00044	20.0	0.5	0.35	10.6	0.1	2.4	2	0	0	2	2	2	2	Ethanolamine	utilisation	-	propanediol	utilisation
MMR_HSR1_Xtn	PF16897.5	gi|429216691|ref|YP_007174681.1|	-	0.02	14.9	0.1	0.043	13.8	0.1	1.5	1	0	0	1	1	1	0	C-terminal	region	of	MMR_HSR1	domain
MeaB	PF03308.16	gi|429216691|ref|YP_007174681.1|	-	0.03	13.3	0.1	0.43	9.5	0.0	2.1	2	0	0	2	2	2	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
FeoB_N	PF02421.18	gi|429216691|ref|YP_007174681.1|	-	0.1	12.1	0.7	5.6	6.5	0.0	2.4	2	0	0	2	2	2	0	Ferrous	iron	transport	protein	B
Dynamin_N	PF00350.23	gi|429216691|ref|YP_007174681.1|	-	0.1	12.6	0.0	0.27	11.3	0.0	1.7	1	1	0	1	1	1	0	Dynamin	family
PIN_9	PF18477.1	gi|429216692|ref|YP_007174682.1|	-	3.5e-17	62.8	1.1	4.2e-17	62.5	1.1	1.0	1	0	0	1	1	1	1	PIN	like	domain
Fcf1	PF04900.12	gi|429216692|ref|YP_007174682.1|	-	1.1e-09	38.6	0.0	1.4e-09	38.2	0.0	1.1	1	0	0	1	1	1	1	Fcf1
NYN_YacP	PF05991.11	gi|429216692|ref|YP_007174682.1|	-	0.0046	16.9	0.5	0.01	15.8	0.2	1.6	1	1	0	1	1	1	1	YacP-like	NYN	domain
PIN_4	PF13638.6	gi|429216692|ref|YP_007174682.1|	-	0.015	15.6	3.7	0.14	12.4	3.7	2.0	1	1	0	1	1	1	0	PIN	domain
Thioredoxin_8	PF13905.6	gi|429216692|ref|YP_007174682.1|	-	0.044	14.1	1.1	0.09	13.1	0.9	1.6	1	1	0	1	1	1	0	Thioredoxin-like
Tox-REase-2	PF15646.6	gi|429216692|ref|YP_007174682.1|	-	0.12	12.6	0.2	0.23	11.6	0.1	1.5	1	1	0	1	1	1	0	Restriction	endonuclease	fold	toxin	2
CN_hydrolase	PF00795.22	gi|429216693|ref|YP_007174683.1|	-	3.2e-15	56.2	0.0	1.8e-14	53.7	0.0	1.9	1	1	0	1	1	1	1	Carbon-nitrogen	hydrolase
PMT_2	PF13231.6	gi|429216694|ref|YP_007174684.1|	-	1.5e-09	38.2	18.1	1.5e-09	38.2	18.1	2.4	2	0	0	2	2	2	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
PMT	PF02366.18	gi|429216694|ref|YP_007174684.1|	-	0.0097	15.5	28.1	0.1	12.1	21.4	3.0	2	1	0	2	2	2	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
Phosphorylase	PF00343.20	gi|429216695|ref|YP_007174685.1|	-	3.5e-16	58.7	0.1	2.8e-13	49.1	0.0	2.2	1	1	1	2	2	2	2	Carbohydrate	phosphorylase
Glycos_transf_1	PF00534.20	gi|429216695|ref|YP_007174685.1|	-	5.6e-12	45.5	0.0	1.3e-11	44.3	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|429216695|ref|YP_007174685.1|	-	6.6e-07	29.8	0.0	1.3e-06	28.9	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Peripla_BP_2	PF01497.18	gi|429216696|ref|YP_007174686.1|	-	1.1e-26	93.9	0.0	1.3e-26	93.6	0.0	1.1	1	0	0	1	1	1	1	Periplasmic	binding	protein
DUF2584	PF10763.9	gi|429216696|ref|YP_007174686.1|	-	0.069	13.3	0.0	0.18	12.0	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2584)
MM_CoA_mutase	PF01642.22	gi|429216697|ref|YP_007174687.1|	-	1.3e-219	730.1	0.0	1.5e-219	729.9	0.0	1.0	1	0	0	1	1	1	1	Methylmalonyl-CoA	mutase
B12-binding	PF02310.19	gi|429216698|ref|YP_007174688.1|	-	3.1e-24	85.3	0.5	3.7e-24	85.1	0.5	1.1	1	0	0	1	1	1	1	B12	binding	domain
HMGL-like	PF00682.19	gi|429216698|ref|YP_007174688.1|	-	0.0064	16.1	0.1	0.0083	15.7	0.1	1.2	1	0	0	1	1	1	1	HMGL-like
Peripla_BP_4	PF13407.6	gi|429216698|ref|YP_007174688.1|	-	0.024	14.2	0.1	0.03	13.9	0.1	1.2	1	0	0	1	1	1	0	Periplasmic	binding	protein	domain
HisG_C	PF08029.11	gi|429216698|ref|YP_007174688.1|	-	0.034	14.3	0.2	0.24	11.6	0.1	2.3	2	1	1	3	3	3	0	HisG,	C-terminal	domain
PEP_mutase	PF13714.6	gi|429216698|ref|YP_007174688.1|	-	0.068	12.6	0.0	0.16	11.4	0.0	1.7	1	1	0	1	1	1	0	Phosphoenolpyruvate	phosphomutase
BET	PF17035.5	gi|429216698|ref|YP_007174688.1|	-	0.13	12.5	0.5	0.37	11.0	0.5	1.9	1	1	0	1	1	1	0	Bromodomain	extra-terminal	-	transcription	regulation
DUF2639	PF11121.8	gi|429216698|ref|YP_007174688.1|	-	0.7	10.0	3.0	19	5.4	0.6	3.7	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF2639)
MeaB	PF03308.16	gi|429216699|ref|YP_007174689.1|	-	8e-101	336.5	0.3	9.7e-101	336.2	0.3	1.1	1	0	0	1	1	1	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
cobW	PF02492.19	gi|429216699|ref|YP_007174689.1|	-	4.1e-08	33.0	1.5	1.5e-07	31.2	1.5	1.9	1	1	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
CbiA	PF01656.23	gi|429216699|ref|YP_007174689.1|	-	3.9e-07	30.2	0.0	1.3e-06	28.5	0.0	1.9	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ATP_bind_1	PF03029.17	gi|429216699|ref|YP_007174689.1|	-	6.8e-07	29.3	0.2	9.3e-05	22.3	0.0	3.1	2	1	1	3	3	3	1	Conserved	hypothetical	ATP	binding	protein
SRP54	PF00448.22	gi|429216699|ref|YP_007174689.1|	-	8.8e-07	28.8	0.4	4e-06	26.6	0.4	2.0	1	1	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
MobB	PF03205.14	gi|429216699|ref|YP_007174689.1|	-	2.2e-06	27.6	0.6	8.2e-06	25.7	0.2	2.0	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NTPase_1	PF03266.15	gi|429216699|ref|YP_007174689.1|	-	1.8e-05	24.7	0.5	3.8e-05	23.7	0.5	1.5	1	0	0	1	1	1	1	NTPase
AAA_30	PF13604.6	gi|429216699|ref|YP_007174689.1|	-	0.00017	21.4	0.0	0.00031	20.5	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
NB-ARC	PF00931.22	gi|429216699|ref|YP_007174689.1|	-	0.00038	19.7	0.5	0.00071	18.8	0.1	1.6	2	0	0	2	2	1	1	NB-ARC	domain
AAA_16	PF13191.6	gi|429216699|ref|YP_007174689.1|	-	0.00041	20.8	0.0	0.00087	19.7	0.0	1.5	1	0	0	1	1	1	1	AAA	ATPase	domain
GTP_EFTU	PF00009.27	gi|429216699|ref|YP_007174689.1|	-	0.00067	19.3	0.3	0.26	10.8	0.0	2.3	2	0	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
KAP_NTPase	PF07693.14	gi|429216699|ref|YP_007174689.1|	-	0.00094	18.5	0.5	0.0047	16.2	0.0	2.2	2	1	1	3	3	3	1	KAP	family	P-loop	domain
KTI12	PF08433.10	gi|429216699|ref|YP_007174689.1|	-	0.0013	18.3	0.1	0.0024	17.4	0.1	1.4	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
ATPase_2	PF01637.18	gi|429216699|ref|YP_007174689.1|	-	0.0014	18.6	0.5	0.0038	17.2	0.1	1.9	2	0	0	2	2	2	1	ATPase	domain	predominantly	from	Archaea
ATPase	PF06745.13	gi|429216699|ref|YP_007174689.1|	-	0.0016	17.9	0.0	0.0033	16.8	0.0	1.6	1	0	0	1	1	1	1	KaiC
AAA_18	PF13238.6	gi|429216699|ref|YP_007174689.1|	-	0.0018	18.8	0.1	0.0049	17.4	0.1	1.8	1	0	0	1	1	1	1	AAA	domain
RsgA_GTPase	PF03193.16	gi|429216699|ref|YP_007174689.1|	-	0.0019	18.2	0.1	0.23	11.4	0.1	2.5	2	0	0	2	2	2	1	RsgA	GTPase
MnmE_helical	PF12631.7	gi|429216699|ref|YP_007174689.1|	-	0.0019	18.4	0.0	0.0026	18.0	0.0	1.3	1	1	0	1	1	1	1	MnmE	helical	domain
MMR_HSR1	PF01926.23	gi|429216699|ref|YP_007174689.1|	-	0.003	17.6	0.3	0.0082	16.2	0.3	1.9	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
TrwB_AAD_bind	PF10412.9	gi|429216699|ref|YP_007174689.1|	-	0.0031	16.5	0.1	0.0052	15.7	0.1	1.3	1	0	0	1	1	1	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
Viral_helicase1	PF01443.18	gi|429216699|ref|YP_007174689.1|	-	0.0032	17.3	0.1	0.0047	16.7	0.1	1.3	1	0	0	1	1	1	1	Viral	(Superfamily	1)	RNA	helicase
AAA_22	PF13401.6	gi|429216699|ref|YP_007174689.1|	-	0.0036	17.6	0.0	0.0085	16.4	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
ABC_tran	PF00005.27	gi|429216699|ref|YP_007174689.1|	-	0.0055	17.2	0.2	0.015	15.8	0.2	1.7	1	0	0	1	1	1	1	ABC	transporter
Zeta_toxin	PF06414.12	gi|429216699|ref|YP_007174689.1|	-	0.0066	15.8	0.1	0.013	14.8	0.1	1.5	1	0	0	1	1	1	1	Zeta	toxin
MipZ	PF09140.11	gi|429216699|ref|YP_007174689.1|	-	0.0066	15.8	0.1	0.012	14.9	0.1	1.6	1	1	0	1	1	1	1	ATPase	MipZ
APS_kinase	PF01583.20	gi|429216699|ref|YP_007174689.1|	-	0.0088	15.9	0.0	0.026	14.4	0.0	1.7	2	0	0	2	2	1	1	Adenylylsulphate	kinase
FtsK_SpoIIIE	PF01580.18	gi|429216699|ref|YP_007174689.1|	-	0.01	15.2	0.1	0.022	14.2	0.1	1.5	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
Arf	PF00025.21	gi|429216699|ref|YP_007174689.1|	-	0.013	15.0	0.3	1.3	8.5	0.0	2.3	2	0	0	2	2	2	0	ADP-ribosylation	factor	family
AAA_17	PF13207.6	gi|429216699|ref|YP_007174689.1|	-	0.014	15.9	0.0	0.046	14.1	0.0	2.1	1	0	0	1	1	1	0	AAA	domain
DDR	PF08841.10	gi|429216699|ref|YP_007174689.1|	-	0.015	14.3	0.2	0.022	13.8	0.2	1.2	1	0	0	1	1	1	0	Diol	dehydratase	reactivase	ATPase-like	domain
Ploopntkinase3	PF18751.1	gi|429216699|ref|YP_007174689.1|	-	0.017	15.1	0.0	0.043	13.7	0.0	1.7	1	0	0	1	1	1	0	P-loop	Nucleotide	Kinase3
AAA_31	PF13614.6	gi|429216699|ref|YP_007174689.1|	-	0.025	14.5	1.4	0.12	12.2	0.0	2.5	2	1	0	3	3	3	0	AAA	domain
PIF1	PF05970.14	gi|429216699|ref|YP_007174689.1|	-	0.026	13.7	0.0	0.058	12.5	0.0	1.5	1	0	0	1	1	1	0	PIF1-like	helicase
DUF2075	PF09848.9	gi|429216699|ref|YP_007174689.1|	-	0.032	13.5	0.0	0.051	12.8	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_24	PF13479.6	gi|429216699|ref|YP_007174689.1|	-	0.044	13.5	0.2	0.086	12.6	0.2	1.4	1	0	0	1	1	1	0	AAA	domain
Thymidylate_kin	PF02223.17	gi|429216699|ref|YP_007174689.1|	-	0.046	13.4	0.0	0.14	11.8	0.0	1.8	2	0	0	2	2	2	0	Thymidylate	kinase
DUF463	PF04317.12	gi|429216699|ref|YP_007174689.1|	-	0.047	12.6	0.1	0.073	12.0	0.1	1.3	1	0	0	1	1	1	0	YcjX-like	family,	DUF463
AAA_14	PF13173.6	gi|429216699|ref|YP_007174689.1|	-	0.048	13.7	0.6	0.12	12.5	0.1	1.9	2	0	0	2	2	1	0	AAA	domain
ParA	PF10609.9	gi|429216699|ref|YP_007174689.1|	-	0.054	12.9	0.2	0.054	12.9	0.2	1.6	2	0	0	2	2	2	0	NUBPL	iron-transfer	P-loop	NTPase
AAA_29	PF13555.6	gi|429216699|ref|YP_007174689.1|	-	0.057	13.2	0.6	0.13	12.0	0.6	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_7	PF12775.7	gi|429216699|ref|YP_007174689.1|	-	0.061	12.8	0.1	0.2	11.1	0.1	1.9	1	1	0	1	1	1	0	P-loop	containing	dynein	motor	region
DUF87	PF01935.17	gi|429216699|ref|YP_007174689.1|	-	0.062	13.4	1.0	0.062	13.4	1.0	2.1	2	1	0	2	2	2	0	Helicase	HerA,	central	domain
NACHT	PF05729.12	gi|429216699|ref|YP_007174689.1|	-	0.066	13.1	1.1	0.099	12.5	0.2	1.8	2	0	0	2	2	1	0	NACHT	domain
AAA_19	PF13245.6	gi|429216699|ref|YP_007174689.1|	-	0.068	13.5	1.2	0.093	13.1	0.2	1.7	2	1	0	2	2	2	0	AAA	domain
T2SSE	PF00437.20	gi|429216699|ref|YP_007174689.1|	-	0.07	12.2	0.0	0.12	11.4	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
PRK	PF00485.18	gi|429216699|ref|YP_007174689.1|	-	0.07	12.9	0.4	0.14	11.9	0.4	1.5	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
ResIII	PF04851.15	gi|429216699|ref|YP_007174689.1|	-	0.073	13.1	0.2	0.6	10.1	0.0	2.1	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
ArsA_ATPase	PF02374.15	gi|429216699|ref|YP_007174689.1|	-	0.08	12.1	3.1	0.33	10.1	0.7	2.2	2	0	0	2	2	2	0	Anion-transporting	ATPase
AAA_33	PF13671.6	gi|429216699|ref|YP_007174689.1|	-	0.13	12.4	0.0	0.26	11.5	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
CLP1_P	PF16575.5	gi|429216699|ref|YP_007174689.1|	-	0.14	12.0	0.1	0.4	10.4	0.0	1.8	2	0	0	2	2	1	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
AAA_28	PF13521.6	gi|429216699|ref|YP_007174689.1|	-	0.38	11.0	0.9	0.82	9.9	0.5	1.8	2	0	0	2	2	1	0	AAA	domain
Ribosomal_S28e	PF01200.18	gi|429216700|ref|YP_007174690.1|	-	6e-31	106.2	4.1	7.8e-31	105.9	4.1	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S28e
RNase_P_Rpp14	PF01900.19	gi|429216701|ref|YP_007174691.1|	-	2.9e-17	62.8	0.0	4.7e-17	62.1	0.0	1.3	1	0	0	1	1	1	1	Rpp14/Pop5	family
MMR_HSR1_C	PF08438.10	gi|429216702|ref|YP_007174692.1|	-	1e-32	113.0	0.5	1.8e-32	112.2	0.1	1.7	2	0	0	2	2	2	1	GTPase	of	unknown	function	C-terminal
MMR_HSR1	PF01926.23	gi|429216702|ref|YP_007174692.1|	-	4.7e-20	71.8	0.1	3.1e-18	65.9	0.0	2.7	3	0	0	3	3	3	1	50S	ribosome-binding	GTPase
TGS	PF02824.21	gi|429216702|ref|YP_007174692.1|	-	9.7e-14	51.2	0.0	1.8e-13	50.3	0.0	1.5	1	0	0	1	1	1	1	TGS	domain
FeoB_N	PF02421.18	gi|429216702|ref|YP_007174692.1|	-	2.8e-06	26.9	1.1	0.00043	19.8	0.0	2.9	3	0	0	3	3	3	1	Ferrous	iron	transport	protein	B
YchF-GTPase_C	PF06071.13	gi|429216702|ref|YP_007174692.1|	-	0.00023	21.3	0.1	0.002	18.3	0.1	2.3	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF933)
Arf	PF00025.21	gi|429216702|ref|YP_007174692.1|	-	0.0017	17.9	0.1	0.0037	16.7	0.1	1.5	1	0	0	1	1	1	1	ADP-ribosylation	factor	family
MMR_HSR1_Xtn	PF16897.5	gi|429216702|ref|YP_007174692.1|	-	0.0017	18.3	0.1	0.0046	16.9	0.1	1.7	1	0	0	1	1	1	1	C-terminal	region	of	MMR_HSR1	domain
GTP_EFTU	PF00009.27	gi|429216702|ref|YP_007174692.1|	-	0.071	12.6	1.8	1.2	8.6	0.2	2.8	3	1	0	3	3	3	0	Elongation	factor	Tu	GTP	binding	domain
RsgA_GTPase	PF03193.16	gi|429216702|ref|YP_007174692.1|	-	0.14	12.1	0.5	2.4	8.1	0.1	2.3	2	0	0	2	2	2	0	RsgA	GTPase
Ras	PF00071.22	gi|429216702|ref|YP_007174692.1|	-	0.14	11.8	0.1	3.3	7.3	0.0	2.3	2	0	0	2	2	2	0	Ras	family
NOG1	PF06858.14	gi|429216702|ref|YP_007174692.1|	-	0.16	11.7	0.2	0.16	11.7	0.2	2.2	3	0	0	3	3	3	0	Nucleolar	GTP-binding	protein	1	(NOG1)
CdvA	PF18822.1	gi|429216702|ref|YP_007174692.1|	-	0.23	11.3	3.2	3.5	7.5	1.2	2.4	1	1	1	2	2	2	0	CdvA-like	coiled-coil	domain
AGOG	PF09171.10	gi|429216703|ref|YP_007174693.1|	-	0.018	14.4	0.4	0.027	13.8	0.3	1.5	1	1	0	1	1	1	0	N-glycosylase/DNA	lyase
DUF3510	PF12022.8	gi|429216703|ref|YP_007174693.1|	-	0.022	15.1	0.9	0.21	12.0	0.3	2.1	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF3510)
SusD-like_3	PF14322.6	gi|429216703|ref|YP_007174693.1|	-	0.048	14.0	0.4	0.07	13.5	0.4	1.3	1	0	0	1	1	1	0	Starch-binding	associating	with	outer	membrane
TRAM	PF01938.20	gi|429216704|ref|YP_007174694.1|	-	0.00043	20.2	0.8	0.00067	19.6	0.8	1.3	1	0	0	1	1	1	1	TRAM	domain
S1	PF00575.23	gi|429216704|ref|YP_007174694.1|	-	0.026	14.8	1.7	0.55	10.6	0.0	2.4	2	1	0	2	2	2	0	S1	RNA	binding	domain
MaoC_dehydratas	PF01575.19	gi|429216704|ref|YP_007174694.1|	-	0.13	11.8	0.1	0.17	11.4	0.1	1.2	1	0	0	1	1	1	0	MaoC	like	domain
ATP-grasp_2	PF08442.10	gi|429216705|ref|YP_007174695.1|	-	3.1e-54	183.6	1.0	1.6e-53	181.3	0.2	2.0	2	0	0	2	2	2	1	ATP-grasp	domain
Ligase_CoA	PF00549.19	gi|429216705|ref|YP_007174695.1|	-	2.6e-15	56.5	0.8	3.5e-15	56.1	0.2	1.5	2	0	0	2	2	2	1	CoA-ligase
GARS_A	PF01071.19	gi|429216705|ref|YP_007174695.1|	-	3.8e-05	23.5	0.3	6.7e-05	22.8	0.3	1.3	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATP-grasp_5	PF13549.6	gi|429216705|ref|YP_007174695.1|	-	7.6e-05	22.3	0.4	0.0003	20.3	0.4	2.0	1	1	0	1	1	1	1	ATP-grasp	domain
ATP-grasp	PF02222.22	gi|429216705|ref|YP_007174695.1|	-	0.0073	15.9	0.1	0.014	15.0	0.1	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
CPSase_L_D2	PF02786.17	gi|429216705|ref|YP_007174695.1|	-	0.015	14.8	0.1	0.041	13.4	0.1	1.7	2	0	0	2	2	2	0	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
CoA_binding	PF02629.19	gi|429216706|ref|YP_007174696.1|	-	1.9e-31	108.6	2.9	2.7e-31	108.1	1.3	2.0	2	0	0	2	2	2	1	CoA	binding	domain
Ligase_CoA	PF00549.19	gi|429216706|ref|YP_007174696.1|	-	4.9e-16	58.9	0.3	8.9e-16	58.1	0.3	1.4	1	0	0	1	1	1	1	CoA-ligase
Succ_CoA_lig	PF13607.6	gi|429216706|ref|YP_007174696.1|	-	1.8e-13	50.5	0.0	3.2e-13	49.6	0.0	1.5	1	0	0	1	1	1	1	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding_2	PF13380.6	gi|429216706|ref|YP_007174696.1|	-	9.7e-09	35.7	0.0	2.2e-08	34.6	0.0	1.7	1	0	0	1	1	1	1	CoA	binding	domain
ELFV_dehydrog	PF00208.21	gi|429216706|ref|YP_007174696.1|	-	0.087	12.5	0.3	0.16	11.7	0.1	1.5	2	0	0	2	2	2	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
ResIII	PF04851.15	gi|429216707|ref|YP_007174697.1|	-	5.8e-26	91.5	0.4	2.2e-25	89.6	0.0	2.1	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
ERCC3_RAD25_C	PF16203.5	gi|429216707|ref|YP_007174697.1|	-	3.4e-22	78.9	0.2	6e-22	78.0	0.2	1.4	1	0	0	1	1	1	1	ERCC3/RAD25/XPB	C-terminal	helicase
Helicase_C	PF00271.31	gi|429216707|ref|YP_007174697.1|	-	5.2e-18	65.4	3.2	8.9e-18	64.7	0.0	2.9	4	0	0	4	4	4	1	Helicase	conserved	C-terminal	domain
DEAD	PF00270.29	gi|429216707|ref|YP_007174697.1|	-	2.1e-08	34.2	0.1	1.7e-07	31.2	0.0	2.2	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
SNF2_N	PF00176.23	gi|429216707|ref|YP_007174697.1|	-	2.1e-05	23.4	0.0	0.00052	18.8	0.0	2.3	1	1	1	2	2	2	1	SNF2	family	N-terminal	domain
AAA_22	PF13401.6	gi|429216707|ref|YP_007174697.1|	-	0.0025	18.1	0.0	0.014	15.7	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
DUF2075	PF09848.9	gi|429216707|ref|YP_007174697.1|	-	0.095	11.9	1.4	0.16	11.2	0.0	1.9	2	1	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
AAA	PF00004.29	gi|429216707|ref|YP_007174697.1|	-	0.15	12.4	1.2	9.7	6.6	0.1	2.8	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_12	PF13087.6	gi|429216707|ref|YP_007174697.1|	-	0.47	10.1	5.5	0.12	11.9	0.2	2.4	2	1	0	2	2	2	0	AAA	domain
tRNA_bind	PF01588.20	gi|429216709|ref|YP_007174699.1|	-	1.4e-28	98.8	0.0	1.7e-28	98.6	0.0	1.0	1	0	0	1	1	1	1	Putative	tRNA	binding	domain
Gp_UL130	PF11668.8	gi|429216709|ref|YP_007174699.1|	-	0.082	12.8	0.0	0.1	12.5	0.0	1.1	1	0	0	1	1	1	0	HCMV	glycoprotein	pUL130
SHS2_Rpb7-N	PF03876.17	gi|429216710|ref|YP_007174700.1|	-	1.2e-11	44.8	0.0	2.3e-11	43.9	0.0	1.5	1	0	0	1	1	1	1	SHS2	domain	found	in	N	terminus	of	Rpb7p/Rpc25p/MJ0397
S1	PF00575.23	gi|429216710|ref|YP_007174700.1|	-	2.1e-11	44.0	0.2	3.2e-11	43.4	0.2	1.3	1	0	0	1	1	1	1	S1	RNA	binding	domain
Abhydrolase_1	PF00561.20	gi|429216711|ref|YP_007174701.1|	-	5e-19	68.9	0.0	2.6e-14	53.5	0.0	2.0	1	1	1	2	2	2	2	alpha/beta	hydrolase	fold
Abhydrolase_6	PF12697.7	gi|429216711|ref|YP_007174701.1|	-	1.7e-09	38.6	0.0	1.2e-07	32.6	0.0	2.0	1	1	1	2	2	2	1	Alpha/beta	hydrolase	family
Hydrolase_4	PF12146.8	gi|429216711|ref|YP_007174701.1|	-	9.3e-08	31.6	0.1	5.2e-05	22.6	0.1	2.2	1	1	1	2	2	2	2	Serine	aminopeptidase,	S33
Peptidase_S9	PF00326.21	gi|429216711|ref|YP_007174701.1|	-	0.00018	21.1	0.8	0.14	11.7	1.3	2.3	1	1	1	2	2	2	2	Prolyl	oligopeptidase	family
Abhydrolase_5	PF12695.7	gi|429216711|ref|YP_007174701.1|	-	0.00023	21.0	0.1	0.00033	20.4	0.1	1.3	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
DLH	PF01738.18	gi|429216711|ref|YP_007174701.1|	-	0.0006	19.4	0.0	0.00077	19.1	0.0	1.1	1	0	0	1	1	1	1	Dienelactone	hydrolase	family
Abhydrolase_2	PF02230.16	gi|429216711|ref|YP_007174701.1|	-	0.00063	19.6	0.0	0.00077	19.3	0.0	1.2	1	0	0	1	1	1	1	Phospholipase/Carboxylesterase
Abhydrolase_4	PF08386.10	gi|429216711|ref|YP_007174701.1|	-	0.004	17.2	0.0	0.021	14.9	0.0	1.9	2	0	0	2	2	2	1	TAP-like	protein
Ndr	PF03096.14	gi|429216711|ref|YP_007174701.1|	-	0.0055	15.4	0.0	0.0091	14.7	0.0	1.3	1	0	0	1	1	1	1	Ndr	family
FSH1	PF03959.13	gi|429216711|ref|YP_007174701.1|	-	0.0057	16.3	0.0	0.0081	15.8	0.0	1.2	1	0	0	1	1	1	1	Serine	hydrolase	(FSH1)
DUF1057	PF06342.12	gi|429216711|ref|YP_007174701.1|	-	0.044	12.8	0.0	0.062	12.3	0.0	1.2	1	0	0	1	1	1	0	Alpha/beta	hydrolase	of	unknown	function	(DUF1057)
Acyl_transf_1	PF00698.21	gi|429216711|ref|YP_007174701.1|	-	0.1	12.1	0.2	0.14	11.6	0.2	1.1	1	0	0	1	1	1	0	Acyl	transferase	domain
Esterase	PF00756.20	gi|429216711|ref|YP_007174701.1|	-	0.14	11.8	0.5	0.29	10.7	0.2	1.8	2	1	0	2	2	2	0	Putative	esterase
DUF2064	PF09837.9	gi|429216711|ref|YP_007174701.1|	-	0.2	11.5	0.1	0.33	10.8	0.1	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2064)
Met_10	PF02475.16	gi|429216712|ref|YP_007174702.1|	-	3.7e-57	193.3	0.7	5.5e-57	192.7	0.7	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_15	PF09445.10	gi|429216712|ref|YP_007174702.1|	-	2.6e-05	23.8	0.1	4.5e-05	23.1	0.1	1.5	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
TRM	PF02005.16	gi|429216712|ref|YP_007174702.1|	-	3.4e-05	23.2	0.1	3.7e-05	23.1	0.1	1.2	1	0	0	1	1	1	1	N2,N2-dimethylguanosine	tRNA	methyltransferase
PrmA	PF06325.13	gi|429216712|ref|YP_007174702.1|	-	0.0011	18.4	0.0	0.0014	18.0	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_18	PF12847.7	gi|429216712|ref|YP_007174702.1|	-	0.011	15.6	0.0	0.031	14.2	0.0	1.7	1	0	0	1	1	1	0	Methyltransferase	domain
MTS	PF05175.14	gi|429216712|ref|YP_007174702.1|	-	0.015	14.9	0.0	0.08	12.5	0.0	2.0	2	0	0	2	2	2	0	Methyltransferase	small	domain
TYW3	PF02676.14	gi|429216713|ref|YP_007174703.1|	-	4.9e-22	78.4	0.1	2.7e-21	75.9	0.1	1.8	1	1	0	1	1	1	1	Methyltransferase	TYW3
ThrE	PF06738.12	gi|429216713|ref|YP_007174703.1|	-	0.096	12.0	0.2	0.14	11.5	0.2	1.2	1	0	0	1	1	1	0	Putative	threonine/serine	exporter
DNA_primase_lrg	PF04104.14	gi|429216714|ref|YP_007174704.1|	-	3.3e-09	36.5	0.3	8.4e-09	35.2	0.3	1.7	1	1	0	1	1	1	1	Eukaryotic	and	archaeal	DNA	primase,	large	subunit
MmgE_PrpD	PF03972.14	gi|429216715|ref|YP_007174705.1|	-	3.1e-132	441.3	0.0	3.6e-132	441.0	0.0	1.0	1	0	0	1	1	1	1	MmgE/PrpD	family
BLOC1_2	PF10046.9	gi|429216716|ref|YP_007174706.1|	-	0.00025	21.3	0.1	0.00066	19.9	0.1	1.7	1	0	0	1	1	1	1	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
DUF5609	PF18429.1	gi|429216716|ref|YP_007174706.1|	-	0.012	15.4	0.1	0.026	14.3	0.1	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5609)
DUF327	PF03885.13	gi|429216716|ref|YP_007174706.1|	-	0.043	13.8	0.0	0.084	12.8	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF327)
Ni_hydr_CYTB	PF01292.20	gi|429216716|ref|YP_007174706.1|	-	0.22	11.1	0.2	0.97	9.0	0.2	1.9	2	0	0	2	2	2	0	Prokaryotic	cytochrome	b561
CTP-dep_RFKase	PF01982.16	gi|429216717|ref|YP_007174707.1|	-	3.5e-33	114.3	0.1	4e-33	114.1	0.1	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF120
Acyl-CoA_dh_1	PF00441.24	gi|429216718|ref|YP_007174708.1|	-	1.7e-30	106.2	0.4	2.8e-30	105.5	0.4	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.16	gi|429216718|ref|YP_007174708.1|	-	2.1e-24	86.3	0.1	1.2e-23	83.9	0.0	2.3	1	1	1	2	2	2	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_2	PF08028.11	gi|429216718|ref|YP_007174708.1|	-	5.7e-14	52.5	0.1	8.6e-14	52.0	0.1	1.2	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_M	PF02770.19	gi|429216718|ref|YP_007174708.1|	-	3.2e-12	46.5	0.0	5.8e-12	45.7	0.0	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
HMG-CoA_red	PF00368.18	gi|429216721|ref|YP_007174711.1|	-	3e-118	395.0	0.0	3.4e-118	394.8	0.0	1.0	1	0	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	reductase
DUF35_N	PF12172.8	gi|429216722|ref|YP_007174712.1|	-	2.6e-11	43.2	0.6	3.9e-11	42.6	0.6	1.2	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
OB_aCoA_assoc	PF01796.17	gi|429216722|ref|YP_007174712.1|	-	1.2e-08	34.8	0.0	1.6e-08	34.4	0.0	1.2	1	0	0	1	1	1	1	DUF35	OB-fold	domain,	acyl-CoA-associated
TackOD1	PF18551.1	gi|429216722|ref|YP_007174712.1|	-	0.0068	16.1	0.2	0.01	15.6	0.2	1.2	1	0	0	1	1	1	1	Thaumarchaeal	output	domain	1
DZR	PF12773.7	gi|429216722|ref|YP_007174712.1|	-	0.01	15.8	1.1	0.016	15.2	1.1	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
zinc_ribbon_2	PF13240.6	gi|429216722|ref|YP_007174712.1|	-	0.015	15.0	7.1	0.029	14.1	7.1	1.5	1	0	0	1	1	1	0	zinc-ribbon	domain
HypA	PF01155.19	gi|429216722|ref|YP_007174712.1|	-	0.023	14.7	0.2	0.037	14.0	0.2	1.3	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Nudix_N_2	PF14803.6	gi|429216722|ref|YP_007174712.1|	-	0.041	13.8	3.0	0.43	10.5	0.4	2.6	3	0	0	3	3	3	0	Nudix	N-terminal
TF_Zn_Ribbon	PF08271.12	gi|429216722|ref|YP_007174712.1|	-	0.092	12.3	1.7	1.1	8.8	0.1	2.3	2	0	0	2	2	2	0	TFIIB	zinc-binding
zf-ribbon_3	PF13248.6	gi|429216722|ref|YP_007174712.1|	-	0.22	11.0	7.9	0.66	9.5	7.9	1.7	1	1	0	1	1	1	0	zinc-ribbon	domain
Zn-ribbon_8	PF09723.10	gi|429216722|ref|YP_007174712.1|	-	0.27	11.4	4.1	0.93	9.7	4.1	1.9	1	1	0	1	1	1	0	Zinc	ribbon	domain
Zn_Tnp_IS1595	PF12760.7	gi|429216722|ref|YP_007174712.1|	-	0.37	10.8	0.3	0.37	10.8	0.3	2.2	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
TFIIS_C	PF01096.18	gi|429216722|ref|YP_007174712.1|	-	0.48	10.3	2.4	5.2	7.0	0.0	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
ACP_syn_III	PF08545.10	gi|429216723|ref|YP_007174713.1|	-	2.4e-09	36.9	0.1	1.7e-05	24.5	0.0	2.5	2	0	0	2	2	2	2	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Thiolase_N	PF00108.23	gi|429216723|ref|YP_007174713.1|	-	2.6e-09	36.8	0.4	2.7e-08	33.5	0.4	2.2	1	1	0	1	1	1	1	Thiolase,	N-terminal	domain
ketoacyl-synt	PF00109.26	gi|429216723|ref|YP_007174713.1|	-	1.1e-06	28.4	0.0	1.3e-05	24.9	0.1	2.1	2	0	0	2	2	2	1	Beta-ketoacyl	synthase,	N-terminal	domain
Thiolase_C	PF02803.18	gi|429216723|ref|YP_007174713.1|	-	5.9e-06	25.9	0.0	1.5e-05	24.6	0.0	1.7	1	0	0	1	1	1	1	Thiolase,	C-terminal	domain
Chal_sti_synt_N	PF00195.19	gi|429216723|ref|YP_007174713.1|	-	0.002	17.6	0.1	0.0073	15.8	0.0	1.8	2	0	0	2	2	2	1	Chalcone	and	stilbene	synthases,	N-terminal	domain
FAE1_CUT1_RppA	PF08392.12	gi|429216723|ref|YP_007174713.1|	-	0.058	12.7	0.2	0.18	11.0	0.1	1.8	2	0	0	2	2	2	0	FAE1/Type	III	polyketide	synthase-like	protein
Hydrolase_6	PF13344.6	gi|429216723|ref|YP_007174713.1|	-	0.1	12.7	0.1	0.23	11.6	0.1	1.6	1	0	0	1	1	1	0	Haloacid	dehalogenase-like	hydrolase
ACP_syn_III_C	PF08541.10	gi|429216724|ref|YP_007174714.1|	-	2.9e-11	43.4	0.1	7.1e-11	42.1	0.0	1.7	2	0	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III	C	terminal
Thiolase_N	PF00108.23	gi|429216724|ref|YP_007174714.1|	-	1.2e-05	24.8	0.1	0.00025	20.5	0.1	2.1	2	0	0	2	2	2	1	Thiolase,	N-terminal	domain
HMG_CoA_synt_C	PF08540.10	gi|429216724|ref|YP_007174714.1|	-	0.00012	21.9	0.1	0.012	15.2	0.0	2.1	1	1	1	2	2	2	2	Hydroxymethylglutaryl-coenzyme	A	synthase	C	terminal
DUF4357	PF14267.6	gi|429216724|ref|YP_007174714.1|	-	0.0092	15.9	0.2	0.033	14.1	0.1	1.9	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4357)
ACP_syn_III	PF08545.10	gi|429216724|ref|YP_007174714.1|	-	0.15	11.9	2.6	0.16	11.8	1.3	1.7	2	0	0	2	2	2	0	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
CHDCT2	PF08074.11	gi|429216725|ref|YP_007174715.1|	-	6e-05	23.3	1.4	9.5e-05	22.6	1.4	1.2	1	0	0	1	1	1	1	CHDCT2	(NUC038)	domain
Seryl_tRNA_N	PF02403.22	gi|429216725|ref|YP_007174715.1|	-	0.00013	22.1	9.6	0.00013	22.1	9.6	2.0	2	0	0	2	2	1	1	Seryl-tRNA	synthetase	N-terminal	domain
Prominin	PF05478.11	gi|429216725|ref|YP_007174715.1|	-	0.00017	19.7	6.4	0.00023	19.3	6.4	1.1	1	0	0	1	1	1	1	Prominin
ALIX_LYPXL_bnd	PF13949.6	gi|429216725|ref|YP_007174715.1|	-	0.00064	19.1	3.8	0.00064	19.1	3.8	1.7	2	1	0	2	2	1	1	ALIX	V-shaped	domain	binding	to	HIV
TMPIT	PF07851.13	gi|429216725|ref|YP_007174715.1|	-	0.00077	18.8	5.3	0.0013	18.1	5.3	1.3	1	0	0	1	1	1	1	TMPIT-like	protein
ThylakoidFormat	PF11264.8	gi|429216725|ref|YP_007174715.1|	-	0.0012	18.6	0.2	0.0012	18.6	0.2	2.2	1	1	1	2	2	2	1	Thylakoid	formation	protein
Snapin_Pallidin	PF14712.6	gi|429216725|ref|YP_007174715.1|	-	0.0013	19.1	7.3	0.0026	18.2	4.8	2.6	2	1	0	2	2	2	1	Snapin/Pallidin
Sec34	PF04136.15	gi|429216725|ref|YP_007174715.1|	-	0.0023	17.8	6.0	0.0083	16.0	5.3	2.0	1	1	1	2	2	2	2	Sec34-like	family
Nup54	PF13874.6	gi|429216725|ref|YP_007174715.1|	-	0.0024	18.0	5.4	0.0024	18.0	5.4	1.5	2	0	0	2	2	1	1	Nucleoporin	complex	subunit	54
Rootletin	PF15035.6	gi|429216725|ref|YP_007174715.1|	-	0.0038	17.3	6.2	0.0038	17.3	6.2	1.6	2	0	0	2	2	1	1	Ciliary	rootlet	component,	centrosome	cohesion
DUF1664	PF07889.12	gi|429216725|ref|YP_007174715.1|	-	0.0043	17.1	10.7	0.018	15.1	6.0	2.5	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF1664)
LPP	PF04728.13	gi|429216725|ref|YP_007174715.1|	-	0.0054	17.1	1.1	5.5	7.5	0.0	3.3	2	1	1	3	3	3	0	Lipoprotein	leucine-zipper
APG6_N	PF17675.1	gi|429216725|ref|YP_007174715.1|	-	0.0061	17.1	16.7	0.0063	17.1	13.9	2.2	2	1	0	2	2	2	1	Apg6	coiled-coil	region
Z1	PF10593.9	gi|429216725|ref|YP_007174715.1|	-	0.0078	15.7	3.4	0.014	15.0	3.4	1.4	1	0	0	1	1	1	1	Z1	domain
Nup88	PF10168.9	gi|429216725|ref|YP_007174715.1|	-	0.0079	14.1	8.5	0.01	13.7	8.5	1.2	1	0	0	1	1	1	1	Nuclear	pore	component
DUF948	PF06103.11	gi|429216725|ref|YP_007174715.1|	-	0.012	15.8	8.2	0.019	15.2	1.0	3.0	2	1	1	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF948)
CLCA	PF08434.11	gi|429216725|ref|YP_007174715.1|	-	0.013	14.8	0.5	0.019	14.3	0.5	1.2	1	0	0	1	1	1	0	Calcium-activated	chloride	channel	N	terminal
Baculo_PEP_C	PF04513.12	gi|429216725|ref|YP_007174715.1|	-	0.015	15.4	5.5	0.015	15.4	5.5	1.5	2	0	0	2	2	1	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
TMF_TATA_bd	PF12325.8	gi|429216725|ref|YP_007174715.1|	-	0.017	15.4	8.3	0.017	15.4	8.3	2.0	2	1	0	2	2	1	0	TATA	element	modulatory	factor	1	TATA	binding
Dor1	PF04124.12	gi|429216725|ref|YP_007174715.1|	-	0.018	13.8	4.0	0.034	12.8	4.0	1.5	1	0	0	1	1	1	0	Dor1-like	family
DUF16	PF01519.16	gi|429216725|ref|YP_007174715.1|	-	0.022	15.2	13.7	0.025	15.1	4.1	2.9	1	1	2	3	3	3	0	Protein	of	unknown	function	DUF16
NYD-SP28_assoc	PF14775.6	gi|429216725|ref|YP_007174715.1|	-	0.026	14.6	3.9	0.46	10.6	0.9	2.7	1	1	1	2	2	2	0	Sperm	tail	C-terminal	domain
HAUS-augmin3	PF14932.6	gi|429216725|ref|YP_007174715.1|	-	0.028	14.0	7.8	0.043	13.4	7.8	1.2	1	0	0	1	1	1	0	HAUS	augmin-like	complex	subunit	3
LOH1CR12	PF10158.9	gi|429216725|ref|YP_007174715.1|	-	0.037	14.1	2.3	0.12	12.4	1.5	2.0	1	1	1	2	2	2	0	Tumour	suppressor	protein
PHTB1_C	PF14728.6	gi|429216725|ref|YP_007174715.1|	-	0.038	13.1	3.6	0.05	12.7	3.6	1.1	1	0	0	1	1	1	0	PTHB1	C-terminus
NPV_P10	PF05531.12	gi|429216725|ref|YP_007174715.1|	-	0.054	14.0	6.3	9.2	6.8	4.7	3.5	2	1	0	2	2	2	0	Nucleopolyhedrovirus	P10	protein
DUF3450	PF11932.8	gi|429216725|ref|YP_007174715.1|	-	0.055	12.8	7.7	0.022	14.1	5.6	1.5	2	0	0	2	2	1	0	Protein	of	unknown	function	(DUF3450)
RmuC	PF02646.16	gi|429216725|ref|YP_007174715.1|	-	0.066	12.3	7.5	0.53	9.4	1.4	2.2	1	1	1	2	2	2	0	RmuC	family
CENP-F_leu_zip	PF10473.9	gi|429216725|ref|YP_007174715.1|	-	0.074	13.1	16.6	0.057	13.4	13.8	2.0	2	0	0	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
TSNAXIP1_N	PF15739.5	gi|429216725|ref|YP_007174715.1|	-	0.082	13.3	7.8	0.044	14.2	5.4	1.8	2	0	0	2	2	1	0	Translin-associated	factor	X-interacting	N-terminus
Syntaxin	PF00804.25	gi|429216725|ref|YP_007174715.1|	-	0.086	12.5	10.1	0.016	14.9	6.3	1.8	2	0	0	2	2	1	0	Syntaxin
RHH_1	PF01402.21	gi|429216725|ref|YP_007174715.1|	-	0.087	12.8	3.6	0.43	10.6	0.2	3.3	3	0	0	3	3	3	0	Ribbon-helix-helix	protein,	copG	family
SKA2	PF16740.5	gi|429216725|ref|YP_007174715.1|	-	0.15	11.9	9.9	0.11	12.3	6.9	2.2	2	1	0	2	2	1	0	Spindle	and	kinetochore-associated	protein	2
Atg14	PF10186.9	gi|429216725|ref|YP_007174715.1|	-	0.15	11.1	5.7	0.24	10.5	5.7	1.4	1	0	0	1	1	1	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
DUF489	PF04356.12	gi|429216725|ref|YP_007174715.1|	-	0.16	11.9	2.2	0.13	12.2	0.9	1.7	2	0	0	2	2	1	0	Protein	of	unknown	function	(DUF489)
HMMR_N	PF15905.5	gi|429216725|ref|YP_007174715.1|	-	0.17	11.4	13.3	0.24	10.8	13.3	1.3	1	0	0	1	1	1	0	Hyaluronan	mediated	motility	receptor	N-terminal
BLOC1_2	PF10046.9	gi|429216725|ref|YP_007174715.1|	-	0.21	11.9	14.6	0.27	11.6	4.6	3.1	1	1	2	3	3	3	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Mod_r	PF07200.13	gi|429216725|ref|YP_007174715.1|	-	0.25	11.5	12.1	1.1	9.3	12.1	2.1	1	1	0	1	1	1	0	Modifier	of	rudimentary	(Mod(r))	protein
GAS	PF13851.6	gi|429216725|ref|YP_007174715.1|	-	0.25	10.6	18.3	0.028	13.8	13.5	1.7	2	0	0	2	2	2	0	Growth-arrest	specific	micro-tubule	binding
AvrM-A	PF18241.1	gi|429216725|ref|YP_007174715.1|	-	0.26	11.7	7.7	0.08	13.4	4.4	1.8	2	0	0	2	2	1	0	Flax-rust	effector	AvrM-A
Phage_GPO	PF05929.11	gi|429216725|ref|YP_007174715.1|	-	0.27	10.8	3.1	0.36	10.4	3.1	1.2	1	0	0	1	1	1	0	Phage	capsid	scaffolding	protein	(GPO)	serine	peptidase
CP12	PF02672.15	gi|429216725|ref|YP_007174715.1|	-	0.27	12.0	4.8	1.7	9.4	0.9	2.6	1	1	1	2	2	2	0	CP12	domain
MCPsignal	PF00015.21	gi|429216725|ref|YP_007174715.1|	-	0.29	10.9	3.6	0.15	11.9	1.6	1.6	2	0	0	2	2	1	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
FmiP_Thoc5	PF09766.9	gi|429216725|ref|YP_007174715.1|	-	0.29	10.4	9.1	0.76	9.0	9.1	1.7	1	1	0	1	1	1	0	Fms-interacting	protein/Thoc5
Occludin_ELL	PF07303.13	gi|429216725|ref|YP_007174715.1|	-	0.3	11.8	7.3	0.9	10.3	0.3	2.8	2	1	1	3	3	2	0	Occludin	homology	domain
AKNA	PF12443.8	gi|429216725|ref|YP_007174715.1|	-	0.34	11.6	3.5	5	7.8	0.5	2.5	1	1	1	2	2	2	0	AT-hook-containing	transcription	factor
DUF4618	PF15397.6	gi|429216725|ref|YP_007174715.1|	-	0.43	10.0	13.7	0.4	10.1	3.7	2.6	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4618)
Fib_alpha	PF08702.10	gi|429216725|ref|YP_007174715.1|	-	0.43	10.8	11.2	1.2	9.3	5.9	2.7	1	1	1	2	2	2	0	Fibrinogen	alpha/beta	chain	family
Tup_N	PF08581.10	gi|429216725|ref|YP_007174715.1|	-	0.43	10.9	7.6	0.77	10.1	2.5	2.9	2	1	1	3	3	3	0	Tup	N-terminal
FlaC_arch	PF05377.11	gi|429216725|ref|YP_007174715.1|	-	0.52	10.8	14.6	4.2	7.8	0.5	4.3	2	1	2	4	4	4	0	Flagella	accessory	protein	C	(FlaC)
HAUS6_N	PF14661.6	gi|429216725|ref|YP_007174715.1|	-	0.52	9.8	6.0	0.78	9.3	5.8	1.4	1	1	0	1	1	1	0	HAUS	augmin-like	complex	subunit	6	N-terminus
TFA2_Winged_2	PF18121.1	gi|429216725|ref|YP_007174715.1|	-	0.55	10.0	8.5	1.7	8.4	2.3	3.3	2	1	1	3	3	2	0	TFA2	Winged	helix	domain	2
Cytochrom_C_2	PF01322.20	gi|429216725|ref|YP_007174715.1|	-	0.59	11.0	3.3	1.2	10.1	3.3	1.5	1	1	0	1	1	1	0	Cytochrome	C'
KxDL	PF10241.9	gi|429216725|ref|YP_007174715.1|	-	0.62	10.4	8.4	0.56	10.5	2.0	2.8	2	1	1	3	3	2	0	Uncharacterized	conserved	protein
IZUMO	PF15005.6	gi|429216725|ref|YP_007174715.1|	-	0.66	10.5	4.8	1.2	9.7	4.8	1.4	1	0	0	1	1	1	0	Izumo	sperm-egg	fusion,	Ig	domain-associated
Sec5	PF15469.6	gi|429216725|ref|YP_007174715.1|	-	0.67	9.7	12.4	0.048	13.5	3.9	2.5	1	1	1	2	2	2	0	Exocyst	complex	component	Sec5
DUF1515	PF07439.11	gi|429216725|ref|YP_007174715.1|	-	0.69	10.0	5.6	0.47	10.5	1.9	2.5	1	1	3	4	4	2	0	Protein	of	unknown	function	(DUF1515)
AAA_13	PF13166.6	gi|429216725|ref|YP_007174715.1|	-	0.79	8.3	12.5	0.88	8.1	11.2	1.4	1	1	0	1	1	1	0	AAA	domain
ZapB	PF06005.12	gi|429216725|ref|YP_007174715.1|	-	0.93	10.0	18.6	0.82	10.2	7.6	3.2	2	1	1	3	3	3	0	Cell	division	protein	ZapB
YabA	PF06156.13	gi|429216725|ref|YP_007174715.1|	-	0.98	10.1	13.1	4.5	8.0	10.8	2.5	2	1	0	2	2	1	0	Initiation	control	protein	YabA
DivIC	PF04977.15	gi|429216725|ref|YP_007174715.1|	-	1	9.2	17.1	0.64	9.8	4.5	3.2	2	1	1	3	3	3	0	Septum	formation	initiator
Cauli_AT	PF03233.13	gi|429216725|ref|YP_007174715.1|	-	1	9.3	8.8	0.27	11.2	5.2	2.0	2	0	0	2	2	1	0	Aphid	transmission	protein
Cytochrom_B562	PF07361.11	gi|429216725|ref|YP_007174715.1|	-	1.1	10.0	6.5	0.6	10.8	1.0	2.5	2	1	1	3	3	2	0	Cytochrome	b562
TFR_dimer	PF04253.15	gi|429216725|ref|YP_007174715.1|	-	1.1	9.4	5.8	0.32	11.1	0.8	2.2	1	1	1	2	2	2	0	Transferrin	receptor-like	dimerisation	domain
Uso1_p115_C	PF04871.13	gi|429216725|ref|YP_007174715.1|	-	1.2	9.5	11.4	2.9	8.3	11.4	1.7	1	0	0	1	1	1	0	Uso1	/	p115	like	vesicle	tethering	protein,	C	terminal	region
PTRF_SDPR	PF15237.6	gi|429216725|ref|YP_007174715.1|	-	1.9	8.1	12.5	6.3	6.4	8.3	2.5	2	1	0	2	2	2	0	PTRF/SDPR	family
CENP-H	PF05837.12	gi|429216725|ref|YP_007174715.1|	-	1.9	8.9	14.4	1.1	9.7	8.7	2.6	2	1	1	3	3	2	0	Centromere	protein	H	(CENP-H)
bZIP_1	PF00170.21	gi|429216725|ref|YP_007174715.1|	-	1.9	8.6	14.1	4.3	7.5	3.2	3.4	2	1	1	3	3	3	0	bZIP	transcription	factor
zf-C4H2	PF10146.9	gi|429216725|ref|YP_007174715.1|	-	2	8.7	12.0	3.6	7.8	12.0	1.5	1	1	0	1	1	1	0	Zinc	finger-containing	protein
Syntaxin_2	PF14523.6	gi|429216725|ref|YP_007174715.1|	-	2.1	8.7	10.0	0.5	10.8	4.1	2.6	2	1	1	3	3	2	0	Syntaxin-like	protein
DUF4446	PF14584.6	gi|429216725|ref|YP_007174715.1|	-	2.3	8.2	9.8	1.3	9.0	2.0	2.7	2	1	1	3	3	2	0	Protein	of	unknown	function	(DUF4446)
TMF_DNA_bd	PF12329.8	gi|429216725|ref|YP_007174715.1|	-	2.5	8.1	21.3	0.87	9.6	11.4	3.0	2	1	1	3	3	2	0	TATA	element	modulatory	factor	1	DNA	binding
RasGAP_C	PF03836.15	gi|429216725|ref|YP_007174715.1|	-	2.6	8.2	10.7	3.3	7.8	2.2	2.4	1	1	0	2	2	2	0	RasGAP	C-terminus
DUF4795	PF16043.5	gi|429216725|ref|YP_007174715.1|	-	2.8	7.5	12.7	0.53	9.9	3.1	2.4	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4795)
Latarcin	PF10279.9	gi|429216725|ref|YP_007174715.1|	-	2.8	8.4	8.6	25	5.4	6.1	2.7	1	1	1	2	2	2	0	Latarcin	precursor
Laminin_II	PF06009.12	gi|429216725|ref|YP_007174715.1|	-	2.9	7.9	12.8	1.6	8.8	8.7	2.4	2	1	0	2	2	2	0	Laminin	Domain	II
DUF2203	PF09969.9	gi|429216725|ref|YP_007174715.1|	-	3	8.6	8.9	4.7	8.0	5.8	2.3	2	1	1	3	3	2	0	Uncharacterized	conserved	protein	(DUF2203)
Ku_C	PF03730.14	gi|429216725|ref|YP_007174715.1|	-	3.1	8.6	8.2	4	8.2	5.4	2.4	2	1	1	3	3	2	0	Ku70/Ku80	C-terminal	arm
DUF4200	PF13863.6	gi|429216725|ref|YP_007174715.1|	-	3.2	8.2	16.5	1	9.7	3.9	2.8	2	1	1	3	3	2	0	Domain	of	unknown	function	(DUF4200)
GAT	PF03127.14	gi|429216725|ref|YP_007174715.1|	-	3.4	8.0	7.8	3	8.2	2.9	2.7	1	1	1	2	2	2	0	GAT	domain
DASH_Dad3	PF08656.10	gi|429216725|ref|YP_007174715.1|	-	4.6	7.4	7.5	2.3	8.4	1.3	3.1	2	1	1	3	3	2	0	DASH	complex	subunit	Dad3
LRR_3	PF07725.12	gi|429216725|ref|YP_007174715.1|	-	4.9	7.2	7.9	25	4.9	0.4	3.4	3	0	0	3	3	3	0	Leucine	Rich	Repeat
TSC22	PF01166.18	gi|429216725|ref|YP_007174715.1|	-	5.6	7.3	13.8	0.86	10.0	3.2	3.1	2	1	1	3	3	2	0	TSC-22/dip/bun	family
Phage_pRha	PF09669.10	gi|429216725|ref|YP_007174715.1|	-	6.1	7.5	7.5	6.9	7.3	0.5	2.7	2	1	1	3	3	2	0	Phage	regulatory	protein	Rha	(Phage_pRha)
Holin_BhlA	PF10960.8	gi|429216725|ref|YP_007174715.1|	-	7.5	6.6	13.4	1.1	9.3	4.4	3.8	4	1	0	4	4	1	0	BhlA	holin	family
Prefoldin_2	PF01920.20	gi|429216725|ref|YP_007174715.1|	-	8	6.5	16.6	1.2	9.1	3.8	3.0	2	1	1	3	3	3	0	Prefoldin	subunit
Carbpep_Y_N	PF05388.11	gi|429216725|ref|YP_007174715.1|	-	8.3	7.0	8.6	64	4.1	8.4	2.3	1	1	1	2	2	2	0	Carboxypeptidase	Y	pro-peptide
Med4	PF10018.9	gi|429216725|ref|YP_007174715.1|	-	10	5.8	12.8	2.6e+02	1.2	12.8	2.2	1	1	0	1	1	1	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
Cren7	PF11520.8	gi|429216726|ref|YP_007174716.1|	-	2.3e-28	97.9	3.9	2.6e-28	97.7	3.9	1.1	1	0	0	1	1	1	1	Chromatin	protein	Cren7
CBM77	PF18283.1	gi|429216727|ref|YP_007174717.1|	-	0.014	15.7	0.0	0.015	15.6	0.0	1.2	1	0	0	1	1	1	0	Carbohydrate	binding	module	77
Lsr2	PF11774.8	gi|429216727|ref|YP_007174717.1|	-	0.027	14.6	0.4	1.7	8.8	0.1	2.0	1	1	1	2	2	2	0	Lsr2
DUF3386	PF11866.8	gi|429216727|ref|YP_007174717.1|	-	0.029	13.9	0.1	0.033	13.7	0.1	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3386)
DUF4136	PF13590.6	gi|429216727|ref|YP_007174717.1|	-	0.063	13.9	0.1	0.08	13.5	0.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4136)
ECH_1	PF00378.20	gi|429216728|ref|YP_007174718.1|	-	1.4e-67	227.6	0.0	2.1e-67	227.1	0.0	1.3	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase
3HCDH_N	PF02737.18	gi|429216728|ref|YP_007174718.1|	-	1e-59	201.4	0.3	3.1e-59	199.9	0.2	1.9	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
3HCDH	PF00725.22	gi|429216728|ref|YP_007174718.1|	-	1.4e-49	166.6	0.0	6e-26	90.9	0.0	2.7	2	0	0	2	2	2	2	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
ECH_2	PF16113.5	gi|429216728|ref|YP_007174718.1|	-	1.6e-40	139.6	0.0	2e-37	129.4	0.0	2.7	2	1	1	3	3	3	2	Enoyl-CoA	hydratase/isomerase
NAD_binding_2	PF03446.15	gi|429216728|ref|YP_007174718.1|	-	0.001	19.2	0.2	0.0051	17.0	0.2	2.1	1	1	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
2-Hacid_dh_C	PF02826.19	gi|429216728|ref|YP_007174718.1|	-	0.027	13.9	0.0	0.052	12.9	0.0	1.5	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
AlaDh_PNT_C	PF01262.21	gi|429216728|ref|YP_007174718.1|	-	0.054	12.8	0.0	0.1	11.9	0.0	1.4	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
UDPG_MGDP_dh_N	PF03721.14	gi|429216728|ref|YP_007174718.1|	-	0.062	12.9	0.4	0.18	11.3	0.4	1.8	1	1	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
DUF3369	PF11849.8	gi|429216728|ref|YP_007174718.1|	-	0.088	13.0	0.0	0.17	12.1	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3369)
F420_oxidored	PF03807.17	gi|429216728|ref|YP_007174718.1|	-	0.13	12.8	0.7	0.4	11.3	0.7	2.0	1	1	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
tRNA_deacylase	PF04414.12	gi|429216729|ref|YP_007174719.1|	-	2.8e-69	232.8	0.2	9.5e-69	231.0	0.0	1.7	2	0	0	2	2	2	1	D-aminoacyl-tRNA	deacylase
Pyr_redox_2	PF07992.14	gi|429216731|ref|YP_007174721.1|	-	1e-57	195.6	0.2	1.3e-57	195.3	0.2	1.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|429216731|ref|YP_007174721.1|	-	4.4e-25	88.0	1.8	1.1e-18	67.5	0.1	3.4	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.22	gi|429216731|ref|YP_007174721.1|	-	3e-15	56.4	0.0	6.6e-15	55.3	0.0	1.6	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox_3	PF13738.6	gi|429216731|ref|YP_007174721.1|	-	7.9e-15	54.9	1.1	2.3e-06	27.1	0.0	3.1	2	1	1	3	3	3	3	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.14	gi|429216731|ref|YP_007174721.1|	-	1.4e-10	40.4	0.9	0.012	14.3	0.1	4.1	3	1	1	4	4	4	3	HI0933-like	protein
DAO	PF01266.24	gi|429216731|ref|YP_007174721.1|	-	1.6e-10	41.1	2.3	0.026	14.1	0.0	4.1	4	0	0	4	4	4	3	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.6	gi|429216731|ref|YP_007174721.1|	-	6.8e-08	32.6	0.1	0.00035	20.7	0.1	2.5	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
K_oxygenase	PF13434.6	gi|429216731|ref|YP_007174721.1|	-	3.1e-07	29.9	0.0	1.5e-05	24.4	0.0	2.3	2	1	0	2	2	2	1	L-lysine	6-monooxygenase	(NADPH-requiring)
FAD_binding_2	PF00890.24	gi|429216731|ref|YP_007174721.1|	-	2.7e-06	26.7	3.1	0.0027	16.9	0.5	4.0	4	0	0	4	4	4	1	FAD	binding	domain
NAD_binding_7	PF13241.6	gi|429216731|ref|YP_007174721.1|	-	4.2e-05	23.9	0.0	0.0058	17.1	0.0	2.5	2	0	0	2	2	2	1	Putative	NAD(P)-binding
NAD_binding_9	PF13454.6	gi|429216731|ref|YP_007174721.1|	-	7.6e-05	22.7	0.7	1.2	9.1	0.0	3.3	3	0	0	3	3	3	1	FAD-NAD(P)-binding
FAD_binding_3	PF01494.19	gi|429216731|ref|YP_007174721.1|	-	8.9e-05	21.9	3.3	0.077	12.2	0.0	3.0	2	1	0	3	3	3	2	FAD	binding	domain
AlaDh_PNT_C	PF01262.21	gi|429216731|ref|YP_007174721.1|	-	0.00011	21.6	0.7	0.35	10.1	0.0	2.5	2	0	0	2	2	2	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
Lycopene_cycl	PF05834.12	gi|429216731|ref|YP_007174721.1|	-	0.00018	20.7	1.6	0.058	12.4	0.1	2.6	3	0	0	3	3	3	2	Lycopene	cyclase	protein
TrkA_N	PF02254.18	gi|429216731|ref|YP_007174721.1|	-	0.00025	21.3	0.9	0.22	11.8	0.1	2.5	2	0	0	2	2	2	2	TrkA-N	domain
GIDA	PF01134.22	gi|429216731|ref|YP_007174721.1|	-	0.0066	15.6	0.2	1.8	7.6	0.1	2.9	3	0	0	3	3	3	1	Glucose	inhibited	division	protein	A
2-Hacid_dh_C	PF02826.19	gi|429216731|ref|YP_007174721.1|	-	0.01	15.2	1.2	2.3	7.5	0.1	2.5	3	0	0	3	3	3	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.17	gi|429216731|ref|YP_007174721.1|	-	0.078	13.6	1.8	15	6.2	0.1	2.9	3	0	0	3	3	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
UDPG_MGDP_dh_N	PF03721.14	gi|429216731|ref|YP_007174721.1|	-	0.11	12.0	1.5	0.13	11.9	0.1	1.9	3	0	0	3	3	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
XdhC_C	PF13478.6	gi|429216731|ref|YP_007174721.1|	-	0.13	12.7	0.0	8	7.0	0.0	2.3	2	0	0	2	2	2	0	XdhC	Rossmann	domain
Thi4	PF01946.17	gi|429216731|ref|YP_007174721.1|	-	0.21	10.8	1.6	2.6	7.2	0.1	2.3	2	0	0	2	2	2	0	Thi4	family
Trp_halogenase	PF04820.14	gi|429216731|ref|YP_007174721.1|	-	0.22	10.3	0.3	0.53	9.1	0.0	1.7	2	0	0	2	2	2	0	Tryptophan	halogenase
Shikimate_DH	PF01488.20	gi|429216731|ref|YP_007174721.1|	-	0.93	9.6	4.6	3.1	7.9	0.3	2.7	3	0	0	3	3	2	0	Shikimate	/	quinate	5-dehydrogenase
GATase	PF00117.28	gi|429216732|ref|YP_007174722.1|	-	2.1e-29	102.6	0.1	4.5e-29	101.6	0.1	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
GMP_synt_C	PF00958.22	gi|429216732|ref|YP_007174722.1|	-	4.2e-23	81.2	0.1	1e-22	80.0	0.1	1.7	1	0	0	1	1	1	1	GMP	synthase	C	terminal	domain
NAD_synthase	PF02540.17	gi|429216732|ref|YP_007174722.1|	-	9.8e-12	44.5	0.3	1.6e-10	40.5	0.3	2.4	1	1	0	1	1	1	1	NAD	synthase
Peptidase_C26	PF07722.13	gi|429216732|ref|YP_007174722.1|	-	2.9e-11	43.5	0.1	2.9e-10	40.3	0.1	2.2	1	1	0	1	1	1	1	Peptidase	C26
ThiI	PF02568.14	gi|429216732|ref|YP_007174722.1|	-	1.4e-07	31.3	0.3	0.0012	18.5	0.0	2.4	2	0	0	2	2	2	2	Thiamine	biosynthesis	protein	(ThiI)
ATP_bind_3	PF01171.20	gi|429216732|ref|YP_007174722.1|	-	0.00019	21.3	0.0	0.00037	20.3	0.0	1.5	1	1	0	1	1	1	1	PP-loop	family
QueC	PF06508.13	gi|429216732|ref|YP_007174722.1|	-	0.00022	20.8	0.0	0.053	13.0	0.0	2.3	1	1	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
Arginosuc_synth	PF00764.19	gi|429216732|ref|YP_007174722.1|	-	0.0015	17.9	0.1	0.0026	17.1	0.1	1.5	1	1	0	1	1	1	1	Arginosuccinate	synthase
GATase_3	PF07685.14	gi|429216732|ref|YP_007174722.1|	-	0.0074	15.9	0.0	0.021	14.4	0.0	1.7	2	0	0	2	2	2	1	CobB/CobQ-like	glutamine	amidotransferase	domain
tRNA_Me_trans	PF03054.16	gi|429216732|ref|YP_007174722.1|	-	0.059	12.2	0.1	0.44	9.3	0.1	2.0	2	0	0	2	2	2	0	tRNA	methyl	transferase
Adenine_deam_C	PF13382.6	gi|429216733|ref|YP_007174723.1|	-	7e-60	201.2	0.3	1.2e-59	200.4	0.3	1.4	1	0	0	1	1	1	1	Adenine	deaminase	C-terminal	domain
Amidohydro_1	PF01979.20	gi|429216733|ref|YP_007174723.1|	-	2.9e-26	92.6	0.7	7.8e-25	87.9	0.7	2.2	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.11	gi|429216733|ref|YP_007174723.1|	-	4.6e-14	52.8	0.0	3.1e-06	27.0	0.0	2.3	2	0	0	2	2	2	2	Amidohydrolase	family
DUF1184	PF06683.11	gi|429216733|ref|YP_007174723.1|	-	0.032	13.7	0.4	0.12	11.8	0.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1184)
IMPDH	PF00478.25	gi|429216734|ref|YP_007174724.1|	-	2.2e-105	352.5	5.3	2.5e-105	352.3	5.3	1.0	1	0	0	1	1	1	1	IMP	dehydrogenase	/	GMP	reductase	domain
FMN_dh	PF01070.18	gi|429216734|ref|YP_007174724.1|	-	3.7e-07	29.5	0.4	7.5e-07	28.5	0.4	1.4	1	0	0	1	1	1	1	FMN-dependent	dehydrogenase
NMO	PF03060.15	gi|429216734|ref|YP_007174724.1|	-	5.8e-07	29.2	7.6	0.00042	19.8	0.9	2.9	2	1	1	3	3	3	2	Nitronate	monooxygenase
Glu_synthase	PF01645.17	gi|429216734|ref|YP_007174724.1|	-	4.5e-05	22.8	3.3	7.9e-05	21.9	3.3	1.3	1	0	0	1	1	1	1	Conserved	region	in	glutamate	synthase
His_biosynth	PF00977.21	gi|429216734|ref|YP_007174724.1|	-	0.0016	18.0	0.6	0.17	11.3	0.1	2.4	2	0	0	2	2	2	2	Histidine	biosynthesis	protein
DHO_dh	PF01180.21	gi|429216734|ref|YP_007174724.1|	-	0.0019	17.5	6.6	0.0044	16.3	6.6	1.8	1	1	0	1	1	1	1	Dihydroorotate	dehydrogenase
ThiG	PF05690.14	gi|429216734|ref|YP_007174724.1|	-	0.005	16.2	0.1	0.012	15.0	0.1	1.6	1	0	0	1	1	1	1	Thiazole	biosynthesis	protein	ThiG
Dus	PF01207.17	gi|429216734|ref|YP_007174724.1|	-	0.021	13.9	0.0	0.18	10.9	0.0	2.3	2	0	0	2	2	2	0	Dihydrouridine	synthase	(Dus)
NanE	PF04131.14	gi|429216734|ref|YP_007174724.1|	-	0.12	11.5	2.1	2.4	7.3	0.5	3.2	3	1	0	3	3	3	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
zf-ribbon_3	PF13248.6	gi|429216735|ref|YP_007174725.1|	-	0.01	15.2	0.6	0.6	9.6	0.0	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-FPG_IleRS	PF06827.14	gi|429216735|ref|YP_007174725.1|	-	0.018	14.9	6.6	0.12	12.3	0.2	2.9	3	0	0	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
DZR	PF12773.7	gi|429216735|ref|YP_007174725.1|	-	0.022	14.8	0.3	0.051	13.6	0.3	1.6	1	1	0	1	1	1	0	Double	zinc	ribbon
zf_UBZ	PF18439.1	gi|429216735|ref|YP_007174725.1|	-	0.036	13.7	0.8	6.5	6.5	0.1	2.3	2	0	0	2	2	2	0	Ubiquitin-Binding	Zinc	Finger
zinc-ribbons_6	PF07191.12	gi|429216735|ref|YP_007174725.1|	-	0.044	13.8	0.4	0.19	11.8	0.4	1.9	1	1	1	2	2	2	0	zinc-ribbons
Rubredoxin	PF00301.20	gi|429216735|ref|YP_007174725.1|	-	0.05	13.6	0.2	11	6.2	0.0	2.2	2	0	0	2	2	2	0	Rubredoxin
zf-TFIIB	PF13453.6	gi|429216735|ref|YP_007174725.1|	-	0.071	12.4	0.5	1.6	8.1	0.1	2.2	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
GFA	PF04828.14	gi|429216735|ref|YP_007174725.1|	-	0.075	13.4	0.7	1.3	9.4	0.1	2.1	1	1	1	2	2	2	0	Glutathione-dependent	formaldehyde-activating	enzyme
Zn_Tnp_IS1	PF03811.13	gi|429216735|ref|YP_007174725.1|	-	0.079	12.7	1.9	7.4	6.4	0.2	2.1	2	0	0	2	2	2	0	InsA	N-terminal	domain
TF_Zn_Ribbon	PF08271.12	gi|429216735|ref|YP_007174725.1|	-	0.087	12.4	3.9	2.2	7.8	0.6	2.5	2	1	0	2	2	2	0	TFIIB	zinc-binding
Elf1	PF05129.13	gi|429216735|ref|YP_007174725.1|	-	0.091	12.8	0.6	0.68	10.0	0.0	2.1	1	1	1	2	2	2	0	Transcription	elongation	factor	Elf1	like
zf-Di19	PF05605.12	gi|429216735|ref|YP_007174725.1|	-	0.1	12.9	0.4	3	8.2	0.0	2.1	1	1	0	1	1	1	0	Drought	induced	19	protein	(Di19),	zinc-binding
Vps39_2	PF10367.9	gi|429216735|ref|YP_007174725.1|	-	0.1	13.0	0.2	0.16	12.5	0.2	1.4	1	1	0	1	1	1	0	Vacuolar	sorting	protein	39	domain	2
Rad50_zn_hook	PF04423.14	gi|429216735|ref|YP_007174725.1|	-	0.15	11.9	2.3	0.54	10.1	0.1	2.7	3	0	0	3	3	3	0	Rad50	zinc	hook	motif
Sgf11	PF08209.11	gi|429216735|ref|YP_007174725.1|	-	0.42	10.2	4.1	0.31	10.6	0.8	2.0	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
zf-CCHC_5	PF14787.6	gi|429216735|ref|YP_007174725.1|	-	0.46	10.2	6.0	2.2	8.1	0.3	2.3	2	0	0	2	2	2	0	GAG-polyprotein	viral	zinc-finger
Ogr_Delta	PF04606.12	gi|429216735|ref|YP_007174725.1|	-	0.53	10.3	4.4	3.1	7.9	4.4	2.1	1	1	0	1	1	1	0	Ogr/Delta-like	zinc	finger
Zn_ribbon_SprT	PF17283.2	gi|429216735|ref|YP_007174725.1|	-	2.5	8.1	7.4	1.5	8.8	0.8	2.0	1	1	0	2	2	2	0	SprT-like	zinc	ribbon	domain
Endonuclease_5	PF04493.14	gi|429216736|ref|YP_007174726.1|	-	1.2e-52	178.5	0.0	1.6e-52	178.1	0.0	1.1	1	0	0	1	1	1	1	Endonuclease	V
Proteasome	PF00227.26	gi|429216737|ref|YP_007174727.1|	-	4.7e-52	176.2	1.1	5.4e-52	176.0	1.1	1.0	1	0	0	1	1	1	1	Proteasome	subunit
Spt5-NGN	PF03439.13	gi|429216738|ref|YP_007174728.1|	-	1.8e-11	43.7	0.1	2.9e-11	43.1	0.1	1.3	1	0	0	1	1	1	1	Early	transcription	elongation	factor	of	RNA	pol	II,	NGN	section
KOW	PF00467.29	gi|429216738|ref|YP_007174728.1|	-	3e-06	27.0	0.7	5.6e-06	26.1	0.3	1.8	2	0	0	2	2	2	1	KOW	motif
SecE	PF00584.20	gi|429216739|ref|YP_007174729.1|	-	0.00026	20.8	0.0	0.00029	20.7	0.0	1.1	1	0	0	1	1	1	1	SecE/Sec61-gamma	subunits	of	protein	translocation	complex
TRIF-NTD	PF17798.1	gi|429216740|ref|YP_007174730.1|	-	0.064	13.3	0.1	0.15	12.2	0.1	1.6	1	0	0	1	1	1	0	TRIF	N-terminal	domain
BAR_3	PF16746.5	gi|429216741|ref|YP_007174731.1|	-	0.0057	16.4	3.8	0.0095	15.7	3.1	1.8	1	1	0	1	1	1	1	BAR	domain	of	APPL	family
Moricin	PF06451.11	gi|429216741|ref|YP_007174731.1|	-	0.11	12.3	0.0	0.25	11.2	0.0	1.5	1	0	0	1	1	1	0	Moricin
Sp38	PF07354.12	gi|429216741|ref|YP_007174731.1|	-	0.14	11.6	0.1	0.34	10.3	0.1	1.6	1	0	0	1	1	1	0	Zona-pellucida-binding	protein	(Sp38)
Fib_alpha	PF08702.10	gi|429216741|ref|YP_007174731.1|	-	1.3	9.2	4.9	0.45	10.7	2.0	1.7	2	0	0	2	2	2	0	Fibrinogen	alpha/beta	chain	family
HEPN_RiboL-PSP	PF18735.1	gi|429216741|ref|YP_007174731.1|	-	4.2	7.3	18.8	31	4.4	17.9	2.4	1	1	0	1	1	1	0	RiboL-PSP-HEPN
AAA_5	PF07728.14	gi|429216743|ref|YP_007174733.1|	-	3e-15	56.4	1.2	2.8e-14	53.3	0.0	2.7	2	1	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA	PF00004.29	gi|429216743|ref|YP_007174733.1|	-	0.00033	21.1	1.9	0.0023	18.3	0.0	3.1	4	0	0	4	4	4	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
MCM	PF00493.23	gi|429216743|ref|YP_007174733.1|	-	0.0044	16.1	0.0	0.011	14.8	0.0	1.7	1	0	0	1	1	1	1	MCM	P-loop	domain
Mg_chelatase	PF01078.21	gi|429216743|ref|YP_007174733.1|	-	0.0068	15.8	0.0	0.014	14.8	0.0	1.5	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
PIF1	PF05970.14	gi|429216743|ref|YP_007174733.1|	-	0.017	14.3	0.1	0.017	14.3	0.1	2.1	1	1	1	2	2	2	0	PIF1-like	helicase
AAA_30	PF13604.6	gi|429216743|ref|YP_007174733.1|	-	0.019	14.7	0.0	0.036	13.8	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
AAA_16	PF13191.6	gi|429216743|ref|YP_007174733.1|	-	0.061	13.7	0.0	0.47	10.8	0.0	2.3	1	1	1	3	3	3	0	AAA	ATPase	domain
AAA_lid_5	PF17865.1	gi|429216743|ref|YP_007174733.1|	-	0.065	13.3	1.2	1.8	8.7	0.2	2.6	2	0	0	2	2	2	0	Midasin	AAA	lid	domain
AAA_7	PF12775.7	gi|429216743|ref|YP_007174733.1|	-	0.08	12.4	0.0	0.35	10.4	0.0	2.1	2	0	0	2	2	2	0	P-loop	containing	dynein	motor	region
AAA_25	PF13481.6	gi|429216743|ref|YP_007174733.1|	-	0.083	12.5	0.0	1.5	8.3	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
IstB_IS21	PF01695.17	gi|429216743|ref|YP_007174733.1|	-	0.083	12.6	0.0	6.9	6.4	0.0	2.4	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
DUF3567	PF12091.8	gi|429216743|ref|YP_007174733.1|	-	0.22	11.7	1.8	20	5.4	0.0	3.2	3	0	0	3	3	2	0	Protein	of	unknown	function	(DUF3567)
AAA_18	PF13238.6	gi|429216743|ref|YP_007174733.1|	-	0.26	11.9	3.6	9.6	6.8	0.0	3.5	3	1	0	3	3	3	0	AAA	domain
PPDK_N	PF01326.19	gi|429216743|ref|YP_007174733.1|	-	0.72	9.1	3.2	0.87	8.8	1.0	2.0	2	0	0	2	2	2	0	Pyruvate	phosphate	dikinase,	PEP/pyruvate	binding	domain
Z1	PF10593.9	gi|429216743|ref|YP_007174733.1|	-	1.3	8.5	10.2	0.29	10.6	3.3	3.0	3	0	0	3	3	3	0	Z1	domain
Glyco_hydro_4C	PF11975.8	gi|429216743|ref|YP_007174733.1|	-	2.4	8.2	8.1	0.67	10.0	2.0	2.6	3	0	0	3	3	3	0	Family	4	glycosyl	hydrolase	C-terminal	domain
UPF0223	PF05256.12	gi|429216743|ref|YP_007174733.1|	-	6.6	7.2	12.0	0.5	10.7	1.3	4.2	3	1	1	4	4	4	0	Uncharacterised	protein	family	(UPF0223)
RE_Eco47II	PF09553.10	gi|429216745|ref|YP_007174735.1|	-	0.018	14.7	3.2	0.025	14.1	3.2	1.4	1	1	0	1	1	1	0	Eco47II	restriction	endonuclease
Ribonuc_red_sm	PF00268.21	gi|429216745|ref|YP_007174735.1|	-	0.028	13.9	5.6	0.053	13.0	0.1	2.2	1	1	1	2	2	2	0	Ribonucleotide	reductase,	small	chain
7TMR-HDED	PF07697.11	gi|429216745|ref|YP_007174735.1|	-	0.18	11.9	1.4	1.2	9.2	1.4	1.9	1	1	0	1	1	1	0	7TM-HD	extracellular
AvrM-A	PF18241.1	gi|429216745|ref|YP_007174735.1|	-	0.37	11.2	6.8	0.93	9.9	6.1	1.9	1	1	1	2	2	2	0	Flax-rust	effector	AvrM-A
G_path_suppress	PF15991.5	gi|429216745|ref|YP_007174735.1|	-	0.55	10.3	3.7	2.8	8.0	0.6	2.0	2	0	0	2	2	2	0	G-protein	pathway	suppressor
Fib_alpha	PF08702.10	gi|429216745|ref|YP_007174735.1|	-	6.6	6.9	7.5	48	4.1	6.0	2.5	1	1	1	2	2	2	0	Fibrinogen	alpha/beta	chain	family
DrsE	PF02635.15	gi|429216746|ref|YP_007174736.1|	-	2e-11	44.3	0.0	2.3e-11	44.1	0.0	1.0	1	0	0	1	1	1	1	DsrE/DsrF-like	family
DrsE_2	PF13686.6	gi|429216746|ref|YP_007174736.1|	-	0.00012	22.0	0.4	0.00015	21.7	0.4	1.2	1	1	0	1	1	1	1	DsrE/DsrF/DrsH-like	family
Fe-ADH	PF00465.19	gi|429216748|ref|YP_007174738.1|	-	3e-75	253.3	0.0	3.7e-75	253.0	0.0	1.0	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH_2	PF13685.6	gi|429216748|ref|YP_007174738.1|	-	5.3e-07	29.6	0.0	1.1e-06	28.6	0.0	1.5	2	0	0	2	2	2	1	Iron-containing	alcohol	dehydrogenase
EFP	PF01132.20	gi|429216748|ref|YP_007174738.1|	-	0.079	13.0	0.0	0.23	11.5	0.0	1.8	1	0	0	1	1	1	0	Elongation	factor	P	(EF-P)	OB	domain
Elf1	PF05129.13	gi|429216749|ref|YP_007174739.1|	-	1.2e-18	67.0	0.7	2e-18	66.2	0.7	1.4	1	0	0	1	1	1	1	Transcription	elongation	factor	Elf1	like
zf-ACC	PF17848.1	gi|429216749|ref|YP_007174739.1|	-	0.024	14.7	1.2	0.048	13.7	0.0	2.1	2	0	0	2	2	2	0	Acetyl-coA	carboxylase	zinc	finger	domain
TF_Zn_Ribbon	PF08271.12	gi|429216749|ref|YP_007174739.1|	-	0.072	12.6	0.0	0.072	12.6	0.0	2.2	3	0	0	3	3	3	0	TFIIB	zinc-binding
PcrB	PF01884.17	gi|429216750|ref|YP_007174740.1|	-	1.1e-53	182.0	0.0	1.3e-53	181.8	0.0	1.0	1	0	0	1	1	1	1	PcrB	family
His_biosynth	PF00977.21	gi|429216750|ref|YP_007174740.1|	-	3.5e-05	23.4	0.0	6.5e-05	22.5	0.0	1.4	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
NanE	PF04131.14	gi|429216750|ref|YP_007174740.1|	-	0.00051	19.3	0.0	0.016	14.4	0.0	2.2	2	0	0	2	2	2	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
Ribul_P_3_epim	PF00834.19	gi|429216750|ref|YP_007174740.1|	-	0.0027	17.1	0.0	0.0073	15.7	0.0	1.6	1	0	0	1	1	1	1	Ribulose-phosphate	3	epimerase	family
G3P_antiterm	PF04309.12	gi|429216750|ref|YP_007174740.1|	-	0.014	14.8	0.0	1.2	8.5	0.0	2.2	2	0	0	2	2	2	0	Glycerol-3-phosphate	responsive	antiterminator
DHO_dh	PF01180.21	gi|429216750|ref|YP_007174740.1|	-	0.016	14.5	0.1	0.025	13.8	0.1	1.3	1	0	0	1	1	1	0	Dihydroorotate	dehydrogenase
Peripla_BP_4	PF13407.6	gi|429216750|ref|YP_007174740.1|	-	0.04	13.5	0.1	2	7.9	0.0	2.1	1	1	1	2	2	2	0	Periplasmic	binding	protein	domain
ThiG	PF05690.14	gi|429216750|ref|YP_007174740.1|	-	0.088	12.1	0.1	0.28	10.5	0.0	1.9	2	0	0	2	2	2	0	Thiazole	biosynthesis	protein	ThiG
PS_pyruv_trans	PF04230.13	gi|429216750|ref|YP_007174740.1|	-	0.11	12.4	0.4	0.62	9.9	0.0	2.1	2	1	0	2	2	2	0	Polysaccharide	pyruvyl	transferase
Trp_syntA	PF00290.20	gi|429216750|ref|YP_007174740.1|	-	0.15	10.9	0.1	0.33	9.8	0.0	1.5	2	0	0	2	2	2	0	Tryptophan	synthase	alpha	chain
Asparaginase_C	PF17763.1	gi|429216750|ref|YP_007174740.1|	-	0.18	12.0	0.0	3.4	7.9	0.0	2.5	2	1	0	2	2	2	0	Glutaminase/Asparaginase	C-terminal	domain
Sec61_beta	PF03911.16	gi|429216751|ref|YP_007174741.1|	-	2e-11	43.7	2.0	2.4e-11	43.5	2.0	1.1	1	0	0	1	1	1	1	Sec61beta	family
SWIM	PF04434.17	gi|429216752|ref|YP_007174742.1|	-	0.0022	17.6	0.1	0.0035	17.0	0.1	1.4	1	0	0	1	1	1	1	SWIM	zinc	finger
Rib_5-P_isom_A	PF06026.14	gi|429216753|ref|YP_007174743.1|	-	1.1e-47	161.8	0.0	1.3e-47	161.6	0.0	1.1	1	0	0	1	1	1	1	Ribose	5-phosphate	isomerase	A	(phosphoriboisomerase	A)
Sugar-bind	PF04198.13	gi|429216753|ref|YP_007174743.1|	-	0.017	14.3	0.0	0.023	13.8	0.0	1.2	1	0	0	1	1	1	0	Putative	sugar-binding	domain
CBS	PF00571.28	gi|429216754|ref|YP_007174744.1|	-	2.2e-22	79.2	0.0	7.9e-11	42.2	0.0	2.2	2	0	0	2	2	2	2	CBS	domain
DUF357	PF04010.13	gi|429216755|ref|YP_007174745.1|	-	2.9e-19	68.9	0.2	5e-19	68.1	0.2	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF357)
CTP_transf_like	PF01467.26	gi|429216755|ref|YP_007174745.1|	-	2.4e-13	50.5	0.0	4.1e-13	49.7	0.0	1.4	1	0	0	1	1	1	1	Cytidylyltransferase-like
NleF_casp_inhib	PF16809.5	gi|429216755|ref|YP_007174745.1|	-	0.011	15.7	0.2	0.16	11.9	0.2	2.3	1	1	0	1	1	1	0	NleF	caspase	inhibitor
Sipho_Gp157	PF05565.11	gi|429216755|ref|YP_007174745.1|	-	0.013	15.5	1.7	0.021	14.8	1.7	1.3	1	0	0	1	1	1	0	Siphovirus	Gp157
FAD_syn	PF06574.12	gi|429216755|ref|YP_007174745.1|	-	0.09	12.7	0.4	0.48	10.3	0.1	2.1	2	0	0	2	2	2	0	FAD	synthetase
TBCC_N	PF16752.5	gi|429216755|ref|YP_007174745.1|	-	0.095	13.1	0.4	0.16	12.4	0.4	1.3	1	0	0	1	1	1	0	Tubulin-specific	chaperone	C	N-terminal	domain
Urm1	PF09138.11	gi|429216755|ref|YP_007174745.1|	-	0.16	12.3	1.9	0.48	10.8	0.1	2.4	2	1	1	3	3	3	0	Urm1	(Ubiquitin	related	modifier)
AMMECR1	PF01871.17	gi|429216756|ref|YP_007174746.1|	-	3.5e-49	166.6	0.0	4.1e-49	166.4	0.0	1.0	1	0	0	1	1	1	1	AMMECR1
NTP_transf_4	PF13562.6	gi|429216757|ref|YP_007174747.1|	-	0.17	12.1	0.2	13	6.0	0.0	2.2	2	0	0	2	2	2	0	Sugar	nucleotidyl	transferase
Radical_SAM	PF04055.21	gi|429216758|ref|YP_007174748.1|	-	1.5e-23	84.0	0.0	2.2e-23	83.5	0.0	1.3	1	0	0	1	1	1	1	Radical	SAM	superfamily
Mob_synth_C	PF06463.13	gi|429216758|ref|YP_007174748.1|	-	2.6e-18	66.2	0.0	4.6e-18	65.4	0.0	1.4	1	0	0	1	1	1	1	Molybdenum	Cofactor	Synthesis	C
Fer4_14	PF13394.6	gi|429216758|ref|YP_007174748.1|	-	3.3e-07	30.5	0.0	8.6e-07	29.1	0.0	1.7	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.6	gi|429216758|ref|YP_007174748.1|	-	8.3e-06	26.1	0.0	2.2e-05	24.8	0.0	1.7	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
UbiA	PF01040.18	gi|429216760|ref|YP_007174750.1|	-	2.1e-43	148.5	20.5	2.5e-43	148.2	20.5	1.0	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
Phtf-FEM1B_bdg	PF12129.8	gi|429216760|ref|YP_007174750.1|	-	0.094	12.5	0.0	0.094	12.5	0.0	2.3	2	1	0	2	2	2	0	Male	germ-cell	putative	homeodomain	transcription	factor
DUF2070	PF09843.9	gi|429216760|ref|YP_007174750.1|	-	3.9	5.6	22.1	0.78	8.0	6.6	2.0	1	1	1	2	2	2	0	Predicted	membrane	protein	(DUF2070)
DUF3784	PF12650.7	gi|429216761|ref|YP_007174751.1|	-	0.0037	17.4	2.3	0.0088	16.2	2.1	1.8	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF3784)
DUF2417	PF10329.9	gi|429216761|ref|YP_007174751.1|	-	0.0096	15.4	0.2	0.012	15.1	0.2	1.1	1	0	0	1	1	1	1	Region	of	unknown	function	(DUF2417)
ETRAMP	PF09716.10	gi|429216761|ref|YP_007174751.1|	-	0.02	14.9	0.6	0.02	14.9	0.6	2.1	2	0	0	2	2	2	0	Malarial	early	transcribed	membrane	protein	(ETRAMP)
DUF2207	PF09972.9	gi|429216761|ref|YP_007174751.1|	-	0.021	13.6	0.5	0.026	13.3	0.5	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
DUF3185	PF11381.8	gi|429216761|ref|YP_007174751.1|	-	0.029	14.4	1.7	0.029	14.4	1.7	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3185)
YukC	PF10140.9	gi|429216761|ref|YP_007174751.1|	-	0.037	12.9	0.0	0.044	12.6	0.0	1.1	1	0	0	1	1	1	0	WXG100	protein	secretion	system	(Wss),	protein	YukC
Phage_holin_5_2	PF16079.5	gi|429216761|ref|YP_007174751.1|	-	0.41	11.0	5.1	10	6.5	5.1	2.1	1	1	0	1	1	1	0	Phage	holin	family	Hol44,	in	holin	superfamily	V
DUF202	PF02656.15	gi|429216761|ref|YP_007174751.1|	-	1.1	9.7	4.4	0.64	10.5	0.3	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF202)
RseC_MucC	PF04246.12	gi|429216763|ref|YP_007174753.1|	-	4.5	7.2	7.6	1.9	8.4	5.3	1.7	1	1	1	2	2	2	0	Positive	regulator	of	sigma(E),	RseC/MucC
DUF4147	PF13660.6	gi|429216764|ref|YP_007174754.1|	-	3.4e-68	229.6	0.0	4.6e-68	229.2	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4147)
MOFRL	PF05161.13	gi|429216764|ref|YP_007174754.1|	-	1.3e-31	109.0	0.3	2.9e-31	107.9	0.3	1.6	1	0	0	1	1	1	1	MOFRL	family
Pyrophosphatase	PF00719.19	gi|429216765|ref|YP_007174755.1|	-	7.6e-55	185.1	0.0	8.6e-55	184.9	0.0	1.0	1	0	0	1	1	1	1	Inorganic	pyrophosphatase
InPase	PF18823.1	gi|429216765|ref|YP_007174755.1|	-	0.077	12.7	0.0	0.13	11.9	0.0	1.4	1	0	0	1	1	1	0	Inorganic	Pyrophosphatase
Molybdopterin_N	PF18364.1	gi|429216765|ref|YP_007174755.1|	-	0.17	11.9	0.0	0.36	10.9	0.0	1.6	1	0	0	1	1	1	0	Molybdopterin	oxidoreductase	N-terminal	domain
Ribosomal_L7Ae	PF01248.26	gi|429216766|ref|YP_007174756.1|	-	1.6e-30	104.7	1.1	2.1e-30	104.3	1.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
RNase_P_pop3	PF08228.11	gi|429216766|ref|YP_007174756.1|	-	0.0003	20.9	0.0	0.00035	20.6	0.0	1.1	1	0	0	1	1	1	1	RNase	P	subunit	Pop3
PELOTA_1	PF15608.6	gi|429216766|ref|YP_007174756.1|	-	0.0004	20.2	0.1	0.00065	19.5	0.1	1.4	1	0	0	1	1	1	1	PELOTA	RNA	binding	domain
Ribosomal_S13	PF00416.22	gi|429216767|ref|YP_007174757.1|	-	4.1e-40	137.1	0.7	4.8e-40	136.9	0.7	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S13/S18
FbpA	PF05833.11	gi|429216767|ref|YP_007174757.1|	-	0.004	16.0	0.0	0.0048	15.7	0.0	1.2	1	0	0	1	1	1	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
HHH_5	PF14520.6	gi|429216767|ref|YP_007174757.1|	-	0.0046	17.5	0.1	0.016	15.8	0.1	2.0	1	1	0	1	1	1	1	Helix-hairpin-helix	domain
HHH_6	PF14579.6	gi|429216767|ref|YP_007174757.1|	-	0.026	14.8	0.1	0.049	13.9	0.1	1.6	1	1	0	1	1	1	0	Helix-hairpin-helix	motif
DUF496	PF04363.12	gi|429216767|ref|YP_007174757.1|	-	0.059	13.4	0.2	0.094	12.8	0.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF496)
S4	PF01479.25	gi|429216768|ref|YP_007174758.1|	-	1.3e-18	66.4	0.0	3.3e-18	65.1	0.0	1.7	1	0	0	1	1	1	1	S4	domain
Ribosomal_S4	PF00163.19	gi|429216768|ref|YP_007174758.1|	-	2.1e-06	28.5	0.1	1.5e-05	25.8	0.0	1.9	2	0	0	2	2	2	1	Ribosomal	protein	S4/S9	N-terminal	domain
Ribosomal_S11	PF00411.19	gi|429216769|ref|YP_007174759.1|	-	1.1e-47	161.0	2.7	1.4e-47	160.7	2.7	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S11
RNA_pol_A_bac	PF01000.26	gi|429216770|ref|YP_007174760.1|	-	1.7e-25	89.5	0.0	7.2e-25	87.5	0.0	1.9	2	0	0	2	2	2	1	RNA	polymerase	Rpb3/RpoA	insert	domain
RNA_pol_L	PF01193.24	gi|429216770|ref|YP_007174760.1|	-	1.4e-16	59.7	0.0	1.7e-16	59.4	0.0	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
Ribosomal_L27A	PF00828.19	gi|429216771|ref|YP_007174761.1|	-	1.3e-08	35.5	1.0	3.1e-08	34.3	1.0	1.7	1	1	0	1	1	1	1	Ribosomal	proteins	50S-L15,	50S-L18e,	60S-L27A
Ribosomal_L18	PF17135.4	gi|429216771|ref|YP_007174761.1|	-	2.5e-07	30.3	0.1	2.7e-07	30.2	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	60S	L18	and	50S	L18e
Ribosomal_L13	PF00572.18	gi|429216772|ref|YP_007174762.1|	-	1.6e-14	54.3	1.3	8.2e-11	42.2	0.5	2.1	1	1	1	2	2	2	2	Ribosomal	protein	L13
Ribosomal_S9	PF00380.19	gi|429216773|ref|YP_007174763.1|	-	2.5e-30	105.5	0.3	2.9e-30	105.3	0.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S9/S16
DUF3970	PF13113.6	gi|429216773|ref|YP_007174763.1|	-	0.026	14.7	0.5	0.071	13.3	0.3	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3970)
SLATT_4	PF18186.1	gi|429216773|ref|YP_007174763.1|	-	0.074	12.7	0.0	0.099	12.3	0.0	1.2	1	0	0	1	1	1	0	SMODS	and	SLOG-associating	2TM	effector	domain	family	4
Toxin_4	PF00706.17	gi|429216773|ref|YP_007174763.1|	-	0.18	12.3	0.0	0.33	11.4	0.0	1.3	1	0	0	1	1	1	0	Anenome	neurotoxin
RNA_pol_N	PF01194.17	gi|429216774|ref|YP_007174764.1|	-	1e-24	86.6	0.1	1.3e-24	86.3	0.1	1.1	1	0	0	1	1	1	1	RNA	polymerases	N	/	8	kDa	subunit
Chordopox_RPO7	PF05864.12	gi|429216774|ref|YP_007174764.1|	-	0.074	13.3	0.1	0.17	12.1	0.1	1.7	1	1	0	1	1	1	0	Chordopoxvirus	DNA-directed	RNA	polymerase	7	kDa	polypeptide	(RPO7)
Ribosomal_S2	PF00318.20	gi|429216775|ref|YP_007174765.1|	-	1.2e-21	77.0	0.1	4.9e-16	58.6	0.2	2.0	1	1	1	2	2	2	2	Ribosomal	protein	S2
Peripla_BP_1	PF00532.21	gi|429216775|ref|YP_007174765.1|	-	0.00091	18.7	0.2	0.0014	18.1	0.2	1.2	1	0	0	1	1	1	1	Periplasmic	binding	proteins	and	sugar	binding	domain	of	LacI	family
Isochorismatase	PF00857.20	gi|429216777|ref|YP_007174767.1|	-	5.1e-39	134.2	0.0	5.9e-39	134.0	0.0	1.0	1	0	0	1	1	1	1	Isochorismatase	family
NAD_binding_2	PF03446.15	gi|429216778|ref|YP_007174768.1|	-	8.8e-26	91.0	0.0	1.5e-25	90.2	0.0	1.3	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_binding_11	PF14833.6	gi|429216778|ref|YP_007174768.1|	-	3e-08	34.0	0.0	4.4e-08	33.4	0.0	1.2	1	0	0	1	1	1	1	NAD-binding	of	NADP-dependent	3-hydroxyisobutyrate	dehydrogenase
3HCDH_N	PF02737.18	gi|429216778|ref|YP_007174768.1|	-	2.3e-06	27.6	0.0	4.9e-06	26.5	0.0	1.6	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.17	gi|429216778|ref|YP_007174768.1|	-	4.1e-06	27.3	0.0	8.6e-06	26.3	0.0	1.6	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
2-Hacid_dh_C	PF02826.19	gi|429216778|ref|YP_007174768.1|	-	9e-06	25.2	0.0	1.5e-05	24.5	0.0	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
IlvN	PF07991.12	gi|429216778|ref|YP_007174768.1|	-	0.0018	17.8	0.0	0.0037	16.9	0.0	1.5	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
DapB_N	PF01113.20	gi|429216778|ref|YP_007174768.1|	-	0.0044	17.1	0.2	0.017	15.2	0.2	2.0	1	1	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
TrkA_N	PF02254.18	gi|429216778|ref|YP_007174768.1|	-	0.011	15.9	0.0	0.074	13.3	0.0	2.3	2	0	0	2	2	2	0	TrkA-N	domain
Gp_dh_N	PF00044.24	gi|429216778|ref|YP_007174768.1|	-	0.034	14.5	0.1	0.087	13.2	0.1	1.7	1	0	0	1	1	1	0	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
Shikimate_DH	PF01488.20	gi|429216778|ref|YP_007174768.1|	-	0.086	12.9	0.2	0.2	11.7	0.2	1.6	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
UDPG_MGDP_dh_N	PF03721.14	gi|429216778|ref|YP_007174768.1|	-	0.17	11.5	0.4	0.5	9.9	0.2	1.9	1	1	1	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Ribonuc_L-PSP	PF01042.21	gi|429216779|ref|YP_007174769.1|	-	5.5e-39	132.9	0.0	6.1e-39	132.8	0.0	1.0	1	0	0	1	1	1	1	Endoribonuclease	L-PSP
AdoMet_dc	PF02675.15	gi|429216780|ref|YP_007174770.1|	-	9.9e-30	102.9	0.0	1.1e-29	102.8	0.0	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	decarboxylase
TatD_DNase	PF01026.21	gi|429216782|ref|YP_007174772.1|	-	4.8e-23	81.8	0.0	5.9e-23	81.6	0.0	1.1	1	0	0	1	1	1	1	TatD	related	DNase
VWA_2	PF13519.6	gi|429216783|ref|YP_007174773.1|	-	1.6e-12	48.0	2.4	1.5e-09	38.5	0.1	3.1	2	1	1	3	3	3	2	von	Willebrand	factor	type	A	domain
VWA	PF00092.28	gi|429216783|ref|YP_007174773.1|	-	1e-09	38.9	0.4	1e-09	38.9	0.4	3.2	2	1	1	3	3	3	1	von	Willebrand	factor	type	A	domain
VWA_CoxE	PF05762.14	gi|429216783|ref|YP_007174773.1|	-	1.6e-07	30.9	0.0	3.4e-07	29.9	0.0	1.5	1	0	0	1	1	1	1	VWA	domain	containing	CoxE-like	protein
VWA_3	PF13768.6	gi|429216783|ref|YP_007174773.1|	-	4.3e-05	23.5	0.0	8e-05	22.6	0.0	1.4	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
FAM184	PF15665.5	gi|429216783|ref|YP_007174773.1|	-	0.029	14.1	2.4	0.052	13.3	2.4	1.4	1	0	0	1	1	1	0	Family	with	sequence	similarity	184,	A	and	B
Glyco_tranf_2_3	PF13641.6	gi|429216783|ref|YP_007174773.1|	-	0.15	12.0	0.0	0.25	11.2	0.0	1.3	1	0	0	1	1	1	0	Glycosyltransferase	like	family	2
PAPA-1	PF04795.12	gi|429216783|ref|YP_007174773.1|	-	0.76	10.6	7.3	5.5	7.9	0.8	3.5	3	0	0	3	3	3	0	PAPA-1-like	conserved	region
CENP-H	PF05837.12	gi|429216783|ref|YP_007174773.1|	-	0.94	9.9	6.0	13	6.3	0.1	2.7	2	0	0	2	2	2	0	Centromere	protein	H	(CENP-H)
AAA_5	PF07728.14	gi|429216784|ref|YP_007174774.1|	-	7.1e-26	90.8	0.0	1.5e-25	89.8	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_lid_8	PF17868.1	gi|429216784|ref|YP_007174774.1|	-	2.1e-08	33.9	0.8	4.8e-08	32.8	0.1	1.9	2	0	0	2	2	2	1	AAA	lid	domain
AAA_3	PF07726.11	gi|429216784|ref|YP_007174774.1|	-	3e-05	23.9	0.0	6e-05	22.9	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA	PF00004.29	gi|429216784|ref|YP_007174774.1|	-	0.00052	20.5	0.5	0.0027	18.1	0.0	2.4	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
PLU-1	PF08429.11	gi|429216784|ref|YP_007174774.1|	-	0.0011	18.2	4.3	0.0016	17.7	4.3	1.2	1	0	0	1	1	1	1	PLU-1-like	protein
AAA_16	PF13191.6	gi|429216784|ref|YP_007174774.1|	-	0.0011	19.3	0.1	0.0044	17.4	0.0	2.0	2	1	0	2	2	2	1	AAA	ATPase	domain
AAA_22	PF13401.6	gi|429216784|ref|YP_007174774.1|	-	0.0028	18.0	0.1	0.039	14.2	0.0	2.5	2	1	0	2	2	2	1	AAA	domain
AAA_7	PF12775.7	gi|429216784|ref|YP_007174774.1|	-	0.0041	16.7	0.1	0.067	12.7	0.0	2.2	2	0	0	2	2	2	1	P-loop	containing	dynein	motor	region
Mg_chelatase	PF01078.21	gi|429216784|ref|YP_007174774.1|	-	0.0072	15.7	0.0	0.028	13.8	0.0	1.9	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
PI_PP_C	PF18365.1	gi|429216784|ref|YP_007174774.1|	-	0.052	13.5	3.6	0.072	13.1	2.2	1.9	2	0	0	2	2	2	0	Phosphoinositide	phosphatase	C-terminal	domain
Flagellin_N	PF00669.20	gi|429216784|ref|YP_007174774.1|	-	0.075	13.1	1.0	0.14	12.3	1.0	1.4	1	0	0	1	1	1	0	Bacterial	flagellin	N-terminal	helical	region
DUF1664	PF07889.12	gi|429216784|ref|YP_007174774.1|	-	0.16	12.0	5.5	0.44	10.6	5.5	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
Sod_Ni	PF09055.11	gi|429216784|ref|YP_007174774.1|	-	0.28	11.8	2.5	0.63	10.6	1.8	2.0	2	0	0	2	2	2	0	Nickel-containing	superoxide	dismutase
GAT	PF03127.14	gi|429216784|ref|YP_007174774.1|	-	0.32	11.3	7.0	0.21	11.9	1.4	3.4	2	1	1	3	3	3	0	GAT	domain
Baculo_PEP_C	PF04513.12	gi|429216784|ref|YP_007174774.1|	-	5	7.2	8.7	0.65	10.0	0.7	2.7	2	1	1	3	3	3	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
TPP_enzyme_C	PF02775.21	gi|429216785|ref|YP_007174775.1|	-	3.6e-23	82.0	0.3	5e-23	81.6	0.3	1.2	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
DXP_synthase_N	PF13292.6	gi|429216785|ref|YP_007174775.1|	-	2.1e-06	27.2	0.7	3.8e-06	26.3	0.7	1.6	1	1	0	1	1	1	1	1-deoxy-D-xylulose-5-phosphate	synthase
E1_dh	PF00676.20	gi|429216785|ref|YP_007174775.1|	-	0.02	13.9	0.6	0.034	13.1	0.6	1.3	1	0	0	1	1	1	0	Dehydrogenase	E1	component
Fur_reg_FbpB	PF13040.6	gi|429216785|ref|YP_007174775.1|	-	0.15	11.6	2.1	0.31	10.6	2.1	1.5	1	0	0	1	1	1	0	Fur-regulated	basic	protein	B
POR_N	PF01855.19	gi|429216786|ref|YP_007174776.1|	-	3.2e-65	220.1	2.9	3.9e-65	219.8	2.9	1.1	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
PFOR_II	PF17147.4	gi|429216786|ref|YP_007174776.1|	-	1.8e-28	98.8	0.0	3.9e-28	97.8	0.0	1.6	1	0	0	1	1	1	1	Pyruvate:ferredoxin	oxidoreductase	core	domain	II
Transketolase_C	PF02780.20	gi|429216786|ref|YP_007174776.1|	-	1.4e-08	34.7	0.0	2.9e-08	33.6	0.0	1.5	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
Fer4	PF00037.27	gi|429216787|ref|YP_007174777.1|	-	9.2e-16	56.9	16.1	4.1e-09	35.9	7.0	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|429216787|ref|YP_007174777.1|	-	3.2e-11	43.2	8.4	4.3e-11	42.8	8.4	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|429216787|ref|YP_007174777.1|	-	1.1e-10	41.9	22.4	3.1e-07	30.9	11.2	1.9	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|429216787|ref|YP_007174777.1|	-	8.4e-10	38.3	13.8	2.3e-06	27.4	5.1	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|429216787|ref|YP_007174777.1|	-	1.4e-09	37.9	20.2	2.1e-06	27.8	10.8	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|429216787|ref|YP_007174777.1|	-	1.3e-08	35.7	6.3	5.2e-05	24.1	1.7	2.3	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.7	gi|429216787|ref|YP_007174777.1|	-	9.4e-08	31.7	13.1	0.0001	22.1	3.2	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|429216787|ref|YP_007174777.1|	-	3.3e-07	30.4	8.5	5.7e-07	29.6	8.5	1.4	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|429216787|ref|YP_007174777.1|	-	0.00039	20.9	10.5	0.034	14.7	0.7	2.4	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_15	PF13459.6	gi|429216787|ref|YP_007174777.1|	-	0.0018	19.0	12.2	0.035	14.9	4.0	2.6	2	1	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_8	PF13183.6	gi|429216787|ref|YP_007174777.1|	-	0.0051	17.2	11.3	0.024	15.1	1.7	2.2	1	1	2	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|429216787|ref|YP_007174777.1|	-	0.006	17.1	10.5	0.19	12.3	1.8	2.2	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|429216787|ref|YP_007174777.1|	-	0.011	16.2	11.8	0.028	14.9	3.3	2.2	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|429216787|ref|YP_007174777.1|	-	0.26	11.5	8.2	3.1	8.0	2.6	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|429216787|ref|YP_007174777.1|	-	1.4	9.8	11.0	0.41	11.5	2.2	2.1	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|429216787|ref|YP_007174777.1|	-	3.2	8.9	17.6	0.3	12.1	7.6	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
POR	PF01558.18	gi|429216788|ref|YP_007174778.1|	-	1.7e-35	122.6	0.3	2.3e-35	122.2	0.3	1.1	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
GAPES3	PF17154.4	gi|429216788|ref|YP_007174778.1|	-	0.046	13.7	0.2	1	9.4	0.1	2.2	1	1	1	2	2	2	0	Gammaproteobacterial	periplasmic	sensor	domain
DUF1743	PF08489.11	gi|429216789|ref|YP_007174779.1|	-	2.2e-27	95.4	0.0	1.2e-26	93.0	0.0	2.2	2	1	0	2	2	2	1	Domain	of	unknown	function	(DUF1743)
tRNA_anti-codon	PF01336.25	gi|429216789|ref|YP_007174779.1|	-	2.3e-07	30.7	0.0	4.8e-07	29.7	0.0	1.5	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
OrfB_Zn_ribbon	PF07282.11	gi|429216789|ref|YP_007174779.1|	-	0.0003	20.7	0.7	0.00056	19.8	0.7	1.4	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
HypA	PF01155.19	gi|429216789|ref|YP_007174779.1|	-	0.03	14.3	0.1	0.05	13.6	0.1	1.3	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
tRNA_anti-like	PF12869.7	gi|429216789|ref|YP_007174779.1|	-	0.093	12.3	0.0	0.15	11.7	0.0	1.2	1	0	0	1	1	1	0	tRNA_anti-like
C1_1	PF00130.22	gi|429216789|ref|YP_007174779.1|	-	0.095	12.6	0.9	0.23	11.4	0.9	1.5	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
tRNA_anti_2	PF13742.6	gi|429216789|ref|YP_007174779.1|	-	0.18	12.0	0.1	0.46	10.7	0.0	1.7	2	0	0	2	2	2	0	OB-fold	nucleic	acid	binding	domain
E6	PF00518.17	gi|429216789|ref|YP_007174779.1|	-	0.2	12.1	4.4	38	4.8	0.1	3.2	2	1	1	3	3	3	0	Early	Protein	(E6)
Rubredoxin_2	PF18073.1	gi|429216789|ref|YP_007174779.1|	-	0.21	11.3	1.1	1.5	8.6	0.2	2.2	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
DNA_RNApol_7kD	PF03604.13	gi|429216789|ref|YP_007174779.1|	-	0.36	10.6	3.5	1.4	8.7	3.5	2.0	1	0	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
AsnC_trans_reg	PF01037.21	gi|429216790|ref|YP_007174780.1|	-	8.9e-14	51.2	0.2	9.8e-14	51.1	0.2	1.0	1	0	0	1	1	1	1	Lrp/AsnC	ligand	binding	domain
NapD	PF03927.13	gi|429216790|ref|YP_007174780.1|	-	0.0013	18.7	0.3	0.6	10.2	0.1	2.2	1	1	1	2	2	2	2	NapD	protein
GARS_N	PF02844.15	gi|429216790|ref|YP_007174780.1|	-	0.021	15.6	0.1	0.025	15.3	0.1	1.2	1	0	0	1	1	1	0	Phosphoribosylglycinamide	synthetase,	N	domain
GYD	PF08734.11	gi|429216790|ref|YP_007174780.1|	-	0.089	12.7	0.0	0.1	12.5	0.0	1.2	1	0	0	1	1	1	0	GYD	domain
DAO	PF01266.24	gi|429216791|ref|YP_007174781.1|	-	0.00019	21.1	0.0	0.26	10.8	0.0	2.4	2	1	0	2	2	2	2	FAD	dependent	oxidoreductase
NAD_binding_2	PF03446.15	gi|429216791|ref|YP_007174781.1|	-	0.0015	18.8	0.0	0.0022	18.2	0.0	1.2	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
2-Hacid_dh_C	PF02826.19	gi|429216791|ref|YP_007174781.1|	-	0.027	13.9	0.0	0.062	12.6	0.0	1.6	2	0	0	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
3HCDH_N	PF02737.18	gi|429216791|ref|YP_007174781.1|	-	0.082	12.8	0.0	0.12	12.2	0.0	1.2	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_8	PF13450.6	gi|429216791|ref|YP_007174781.1|	-	0.091	13.0	0.0	0.24	11.6	0.0	1.7	1	0	0	1	1	1	0	NAD(P)-binding	Rossmann-like	domain
Lycopene_cycl	PF05834.12	gi|429216791|ref|YP_007174781.1|	-	0.17	10.9	0.0	4.1	6.3	0.0	2.1	2	0	0	2	2	2	0	Lycopene	cyclase	protein
DEAD	PF00270.29	gi|429216793|ref|YP_007174783.1|	-	7.7e-25	87.7	0.0	1.4e-24	86.8	0.0	1.5	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.31	gi|429216793|ref|YP_007174783.1|	-	2e-21	76.4	0.1	1.4e-16	60.8	0.1	2.4	2	0	0	2	2	2	2	Helicase	conserved	C-terminal	domain
DUF1998	PF09369.10	gi|429216793|ref|YP_007174783.1|	-	1.5e-10	41.7	0.0	4e-10	40.3	0.0	1.8	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1998)
ResIII	PF04851.15	gi|429216793|ref|YP_007174783.1|	-	3.4e-07	30.4	0.0	1.8e-06	28.1	0.0	2.0	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
AAA_19	PF13245.6	gi|429216793|ref|YP_007174783.1|	-	0.016	15.6	0.0	0.065	13.6	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
AAA_30	PF13604.6	gi|429216793|ref|YP_007174783.1|	-	0.026	14.2	0.0	0.046	13.4	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
SecA_DEAD	PF07517.14	gi|429216793|ref|YP_007174783.1|	-	0.057	12.7	0.0	0.092	12.0	0.0	1.2	1	0	0	1	1	1	0	SecA	DEAD-like	domain
PhoH	PF02562.16	gi|429216793|ref|YP_007174783.1|	-	0.16	11.4	0.0	0.96	8.9	0.0	2.1	2	0	0	2	2	2	0	PhoH-like	protein
Sugar_tr	PF00083.24	gi|429216794|ref|YP_007174784.1|	-	6.3e-57	193.4	19.5	7.8e-57	193.1	19.5	1.0	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.16	gi|429216794|ref|YP_007174784.1|	-	7.1e-36	123.8	32.4	2.8e-30	105.5	26.7	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_4	PF06779.14	gi|429216794|ref|YP_007174784.1|	-	7.4e-06	25.5	9.8	1.3e-05	24.7	4.0	2.9	3	1	1	4	4	4	2	Uncharacterised	MFS-type	transporter	YbfB
Halogen_Hydrol	PF10112.9	gi|429216794|ref|YP_007174784.1|	-	5.2	7.1	9.7	3	7.8	0.1	3.9	4	0	0	4	4	4	0	5-bromo-4-chloroindolyl	phosphate	hydrolysis	protein
Pyr_redox_2	PF07992.14	gi|429216795|ref|YP_007174785.1|	-	4.9e-54	183.6	0.3	6.1e-54	183.2	0.3	1.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.22	gi|429216795|ref|YP_007174785.1|	-	1.7e-25	89.4	0.5	1.4e-24	86.5	0.0	2.5	3	0	0	3	3	2	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.27	gi|429216795|ref|YP_007174785.1|	-	4.6e-22	78.4	3.5	2.6e-20	72.8	0.1	2.9	3	0	0	3	3	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|429216795|ref|YP_007174785.1|	-	2.3e-11	43.5	0.2	1.8e-08	34.0	0.0	2.4	1	1	1	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.22	gi|429216795|ref|YP_007174785.1|	-	2.2e-09	36.9	4.9	0.00013	21.2	1.0	4.0	2	2	0	3	3	3	2	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.14	gi|429216795|ref|YP_007174785.1|	-	2.9e-06	26.3	8.5	0.0068	15.2	0.3	3.2	2	1	1	3	3	3	3	HI0933-like	protein
FAD_oxidored	PF12831.7	gi|429216795|ref|YP_007174785.1|	-	5.6e-06	26.0	0.6	0.0025	17.3	0.0	3.1	3	0	0	3	3	3	1	FAD	dependent	oxidoreductase
K_oxygenase	PF13434.6	gi|429216795|ref|YP_007174785.1|	-	5.9e-06	25.6	0.0	0.00013	21.3	0.0	2.1	1	1	1	2	2	2	1	L-lysine	6-monooxygenase	(NADPH-requiring)
NAD_binding_8	PF13450.6	gi|429216795|ref|YP_007174785.1|	-	6.7e-06	26.2	2.7	0.047	13.9	0.3	2.5	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
FAD_binding_3	PF01494.19	gi|429216795|ref|YP_007174785.1|	-	1.4e-05	24.5	0.9	0.0098	15.2	0.2	2.3	2	0	0	2	2	2	2	FAD	binding	domain
FAD_binding_2	PF00890.24	gi|429216795|ref|YP_007174785.1|	-	6.4e-05	22.2	0.9	0.0006	19.0	0.2	2.6	2	1	0	2	2	2	1	FAD	binding	domain
Thi4	PF01946.17	gi|429216795|ref|YP_007174785.1|	-	0.00016	21.0	0.3	0.034	13.4	0.0	2.4	2	0	0	2	2	2	1	Thi4	family
DAO	PF01266.24	gi|429216795|ref|YP_007174785.1|	-	0.00047	19.8	4.9	0.17	11.5	0.6	3.2	3	0	0	3	3	3	2	FAD	dependent	oxidoreductase
UDPG_MGDP_dh_N	PF03721.14	gi|429216795|ref|YP_007174785.1|	-	0.002	17.8	2.8	0.0084	15.7	0.7	2.6	2	1	0	2	2	2	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
3HCDH_N	PF02737.18	gi|429216795|ref|YP_007174785.1|	-	0.0049	16.8	1.4	0.0058	16.5	0.2	1.8	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.19	gi|429216795|ref|YP_007174785.1|	-	0.0051	16.2	0.0	0.053	12.9	0.0	2.4	3	0	0	3	3	3	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
AlaDh_PNT_C	PF01262.21	gi|429216795|ref|YP_007174785.1|	-	0.028	13.7	0.2	0.071	12.4	0.0	1.8	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
TrkA_N	PF02254.18	gi|429216795|ref|YP_007174785.1|	-	0.057	13.7	0.3	0.42	10.9	0.1	2.5	2	0	0	2	2	2	0	TrkA-N	domain
Lycopene_cycl	PF05834.12	gi|429216795|ref|YP_007174785.1|	-	0.06	12.4	4.6	1.6	7.7	0.2	2.8	3	0	0	3	3	3	0	Lycopene	cyclase	protein
ThiF	PF00899.21	gi|429216795|ref|YP_007174785.1|	-	0.07	12.5	0.0	0.12	11.7	0.0	1.3	1	0	0	1	1	1	0	ThiF	family
XdhC_C	PF13478.6	gi|429216795|ref|YP_007174785.1|	-	0.087	13.3	0.0	0.35	11.4	0.0	2.0	2	0	0	2	2	2	0	XdhC	Rossmann	domain
DpaA_N	PF16924.5	gi|429216795|ref|YP_007174785.1|	-	0.14	12.3	0.3	0.56	10.3	0.0	2.2	3	0	0	3	3	2	0	Dipicolinate	synthase	subunit	A	N-terminal	domain
Amino_oxidase	PF01593.24	gi|429216795|ref|YP_007174785.1|	-	0.17	11.1	0.0	0.97	8.6	0.0	2.1	3	0	0	3	3	3	0	Flavin	containing	amine	oxidoreductase
Pribosyltran_N	PF13793.6	gi|429216796|ref|YP_007174786.1|	-	3.4e-23	81.8	0.1	1.3e-20	73.5	0.0	2.3	2	0	0	2	2	2	2	N-terminal	domain	of	ribose	phosphate	pyrophosphokinase
Pribosyltran	PF00156.27	gi|429216796|ref|YP_007174786.1|	-	7.4e-20	71.1	0.2	2.6e-19	69.3	0.1	1.8	2	0	0	2	2	2	1	Phosphoribosyl	transferase	domain
Pribosyl_synth	PF14572.6	gi|429216796|ref|YP_007174786.1|	-	5.2e-14	52.7	1.6	2.1e-13	50.7	0.5	2.1	2	0	0	2	2	2	1	Phosphoribosyl	synthetase-associated	domain
UPRTase	PF14681.6	gi|429216796|ref|YP_007174786.1|	-	1e-06	28.3	0.2	0.00017	21.1	0.1	2.2	2	0	0	2	2	2	2	Uracil	phosphoribosyltransferase
PRTase_2	PF15609.6	gi|429216796|ref|YP_007174786.1|	-	0.00019	21.0	0.1	0.00033	20.2	0.1	1.3	1	0	0	1	1	1	1	Phosphoribosyl	transferase
PRTase_3	PF15610.6	gi|429216796|ref|YP_007174786.1|	-	0.013	14.7	0.1	0.036	13.3	0.2	1.6	2	0	0	2	2	2	0	PRTase	ComF-like
Pribosyltran	PF00156.27	gi|429216797|ref|YP_007174787.1|	-	1.1e-11	44.5	0.0	2.2e-11	43.5	0.0	1.4	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
HTH_3	PF01381.22	gi|429216797|ref|YP_007174787.1|	-	0.097	12.7	0.4	0.26	11.4	0.4	1.7	1	0	0	1	1	1	0	Helix-turn-helix
HTH_5	PF01022.20	gi|429216797|ref|YP_007174787.1|	-	0.45	10.4	2.1	0.37	10.7	0.5	1.7	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
Glyco_tran_28_C	PF04101.16	gi|429216798|ref|YP_007174788.1|	-	1.5e-08	34.8	0.0	2.9e-08	33.9	0.0	1.5	1	0	0	1	1	1	1	Glycosyltransferase	family	28	C-terminal	domain
Glyco_transf_4	PF13439.6	gi|429216798|ref|YP_007174788.1|	-	0.00034	20.6	0.0	0.0059	16.6	0.0	2.1	2	0	0	2	2	2	1	Glycosyltransferase	Family	4
Glyco_transf_28	PF03033.20	gi|429216798|ref|YP_007174788.1|	-	0.0026	17.8	0.0	0.0066	16.5	0.0	1.7	1	0	0	1	1	1	1	Glycosyltransferase	family	28	N-terminal	domain
YjeF_N	PF03853.15	gi|429216798|ref|YP_007174788.1|	-	0.044	13.7	0.0	0.065	13.1	0.0	1.4	1	0	0	1	1	1	0	YjeF-related	protein	N-terminus
PALP	PF00291.25	gi|429216798|ref|YP_007174788.1|	-	0.048	13.1	0.0	0.76	9.1	0.0	2.1	1	1	1	2	2	2	0	Pyridoxal-phosphate	dependent	enzyme
Methyltr_RsmB-F	PF01189.17	gi|429216799|ref|YP_007174789.1|	-	8.9e-35	120.2	0.0	1.2e-34	119.7	0.0	1.1	1	0	0	1	1	1	1	16S	rRNA	methyltransferase	RsmB/F
PUA	PF01472.20	gi|429216799|ref|YP_007174789.1|	-	7.6e-10	38.6	0.0	1.6e-09	37.6	0.0	1.6	1	0	0	1	1	1	1	PUA	domain
Methyltransf_31	PF13847.6	gi|429216799|ref|YP_007174789.1|	-	1.2e-06	28.4	0.0	2e-06	27.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
FtsJ	PF01728.19	gi|429216799|ref|YP_007174789.1|	-	2.8e-06	27.6	0.0	4.1e-06	27.0	0.0	1.2	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
UPF0113	PF03657.13	gi|429216799|ref|YP_007174789.1|	-	0.0077	16.5	0.1	0.019	15.2	0.1	1.7	1	0	0	1	1	1	1	UPF0113	PUA	domain
Methyltr_RsmF_N	PF17125.5	gi|429216799|ref|YP_007174789.1|	-	0.063	13.8	0.0	4.6	7.8	0.0	2.4	2	0	0	2	2	2	0	N-terminal	domain	of	16S	rRNA	methyltransferase	RsmF
Methyltransf_8	PF05148.15	gi|429216799|ref|YP_007174789.1|	-	0.1	12.4	0.0	0.27	11.1	0.0	1.6	1	0	0	1	1	1	0	Hypothetical	methyltransferase
MFS_1	PF07690.16	gi|429216801|ref|YP_007174791.1|	-	5.3e-45	153.9	92.4	4e-36	124.7	22.9	2.4	1	1	2	3	3	3	3	Major	Facilitator	Superfamily
Sugar_tr	PF00083.24	gi|429216801|ref|YP_007174791.1|	-	1.3e-10	40.7	10.7	1.3e-10	40.7	10.7	3.0	2	1	0	2	2	2	1	Sugar	(and	other)	transporter
MFS_2	PF13347.6	gi|429216801|ref|YP_007174791.1|	-	0.15	10.6	48.3	0.014	14.0	4.8	4.2	2	2	1	3	3	3	0	MFS/sugar	transport	protein
OATP	PF03137.20	gi|429216801|ref|YP_007174791.1|	-	8.2	4.6	18.1	0.03	12.6	1.7	3.1	2	1	1	3	3	3	0	Organic	Anion	Transporter	Polypeptide	(OATP)	family
TENA_THI-4	PF03070.16	gi|429216803|ref|YP_007174793.1|	-	4.5e-25	88.7	0.0	5.4e-25	88.4	0.0	1.1	1	0	0	1	1	1	1	TENA/THI-4/PQQC	family
Ribosomal_S5_C	PF03719.15	gi|429216803|ref|YP_007174793.1|	-	0.097	12.1	0.1	0.38	10.3	0.0	2.0	2	0	0	2	2	2	0	Ribosomal	protein	S5,	C-terminal	domain
AAA	PF00004.29	gi|429216804|ref|YP_007174794.1|	-	8.8e-38	129.7	0.0	2e-37	128.6	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_lid_3	PF17862.1	gi|429216804|ref|YP_007174794.1|	-	1.6e-09	37.4	0.0	5.5e-09	35.7	0.0	2.1	2	0	0	2	2	1	1	AAA+	lid	domain
Vps4_C	PF09336.10	gi|429216804|ref|YP_007174794.1|	-	3.8e-08	33.2	0.1	1.8e-07	31.1	0.0	2.0	2	0	0	2	2	2	1	Vps4	C	terminal	oligomerisation	domain
AAA_16	PF13191.6	gi|429216804|ref|YP_007174794.1|	-	1.3e-06	28.9	0.0	0.00033	21.1	0.0	3.2	3	0	0	3	3	3	1	AAA	ATPase	domain
AAA_5	PF07728.14	gi|429216804|ref|YP_007174794.1|	-	6.2e-06	26.3	0.0	0.00034	20.6	0.0	2.6	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_14	PF13173.6	gi|429216804|ref|YP_007174794.1|	-	1.1e-05	25.4	0.1	0.0013	18.8	0.0	2.6	2	1	0	2	2	2	1	AAA	domain
MIT	PF04212.18	gi|429216804|ref|YP_007174794.1|	-	1.5e-05	24.9	3.9	1.5e-05	24.9	3.9	2.2	3	0	0	3	3	2	1	MIT	(microtubule	interacting	and	transport)	domain
AAA_2	PF07724.14	gi|429216804|ref|YP_007174794.1|	-	1.7e-05	25.0	0.0	4.2e-05	23.7	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
RuvB_N	PF05496.12	gi|429216804|ref|YP_007174794.1|	-	2e-05	24.4	0.0	0.00022	21.0	0.0	2.4	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_22	PF13401.6	gi|429216804|ref|YP_007174794.1|	-	7.1e-05	23.1	0.0	0.0027	18.0	0.0	2.8	2	1	0	2	2	1	1	AAA	domain
TIP49	PF06068.13	gi|429216804|ref|YP_007174794.1|	-	9.3e-05	21.8	1.1	0.00032	20.0	0.0	2.3	2	1	1	3	3	3	1	TIP49	P-loop	domain
AAA_18	PF13238.6	gi|429216804|ref|YP_007174794.1|	-	0.0011	19.5	0.8	0.046	14.3	0.0	2.9	3	1	0	3	3	3	1	AAA	domain
RNA_helicase	PF00910.22	gi|429216804|ref|YP_007174794.1|	-	0.0013	19.1	0.0	0.0072	16.7	0.0	2.3	2	1	0	2	2	1	1	RNA	helicase
AAA_24	PF13479.6	gi|429216804|ref|YP_007174794.1|	-	0.0019	17.9	0.4	0.0064	16.2	0.1	2.1	2	1	0	2	2	2	1	AAA	domain
Mg_chelatase	PF01078.21	gi|429216804|ref|YP_007174794.1|	-	0.0023	17.3	0.0	0.0059	16.0	0.0	1.6	2	0	0	2	2	1	1	Magnesium	chelatase,	subunit	ChlI
AAA_25	PF13481.6	gi|429216804|ref|YP_007174794.1|	-	0.0025	17.4	1.5	0.038	13.6	0.1	2.6	2	1	1	3	3	3	1	AAA	domain
Zeta_toxin	PF06414.12	gi|429216804|ref|YP_007174794.1|	-	0.0038	16.5	0.1	0.11	11.8	0.0	2.4	2	0	0	2	2	2	1	Zeta	toxin
Sigma54_activat	PF00158.26	gi|429216804|ref|YP_007174794.1|	-	0.0054	16.4	0.0	0.17	11.6	0.0	2.7	3	0	0	3	3	3	1	Sigma-54	interaction	domain
IstB_IS21	PF01695.17	gi|429216804|ref|YP_007174794.1|	-	0.0063	16.3	0.0	0.012	15.4	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_33	PF13671.6	gi|429216804|ref|YP_007174794.1|	-	0.0066	16.6	0.0	0.029	14.5	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_11	PF13086.6	gi|429216804|ref|YP_007174794.1|	-	0.015	15.1	0.2	0.12	12.1	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
SIMPL	PF04402.14	gi|429216804|ref|YP_007174794.1|	-	0.016	15.6	0.1	0.036	14.5	0.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF541)
TPR_6	PF13174.6	gi|429216804|ref|YP_007174794.1|	-	0.017	15.7	0.1	0.069	13.8	0.1	2.1	1	1	0	1	1	1	0	Tetratricopeptide	repeat
RPA_C	PF08784.11	gi|429216804|ref|YP_007174794.1|	-	0.017	15.8	0.0	0.057	14.1	0.0	1.8	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
NACHT	PF05729.12	gi|429216804|ref|YP_007174794.1|	-	0.02	14.8	0.0	0.046	13.6	0.0	1.6	1	0	0	1	1	1	0	NACHT	domain
AAA_28	PF13521.6	gi|429216804|ref|YP_007174794.1|	-	0.027	14.7	0.1	0.12	12.6	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
DUF815	PF05673.13	gi|429216804|ref|YP_007174794.1|	-	0.038	13.1	0.0	0.095	11.8	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
Parvo_NS1	PF01057.17	gi|429216804|ref|YP_007174794.1|	-	0.04	13.0	0.0	0.082	12.0	0.0	1.5	1	0	0	1	1	1	0	Parvovirus	non-structural	protein	NS1
AAA_7	PF12775.7	gi|429216804|ref|YP_007174794.1|	-	0.056	13.0	0.0	0.16	11.4	0.0	1.8	1	1	0	1	1	1	0	P-loop	containing	dynein	motor	region
ATP-synt_ab	PF00006.25	gi|429216804|ref|YP_007174794.1|	-	0.057	13.1	0.0	3	7.5	0.0	2.3	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATPase_2	PF01637.18	gi|429216804|ref|YP_007174794.1|	-	0.06	13.2	5.8	3.1	7.6	0.0	3.5	3	2	1	4	4	4	0	ATPase	domain	predominantly	from	Archaea
USP8_dimer	PF08969.11	gi|429216804|ref|YP_007174794.1|	-	0.066	13.4	2.0	0.17	12.1	2.0	1.6	1	0	0	1	1	1	0	USP8	dimerisation	domain
ATPase	PF06745.13	gi|429216804|ref|YP_007174794.1|	-	0.07	12.5	0.5	0.77	9.1	0.0	2.6	2	1	1	3	3	3	0	KaiC
PTS_IIA	PF02255.16	gi|429216804|ref|YP_007174794.1|	-	0.085	12.9	0.9	0.23	11.5	0.9	1.7	1	0	0	1	1	1	0	PTS	system,	Lactose/Cellobiose	specific	IIA	subunit
DUF2075	PF09848.9	gi|429216804|ref|YP_007174794.1|	-	0.093	12.0	0.0	0.22	10.7	0.0	1.7	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
DUF4175	PF13779.6	gi|429216804|ref|YP_007174794.1|	-	0.12	10.2	0.0	0.18	9.7	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4175)
PhoH	PF02562.16	gi|429216804|ref|YP_007174794.1|	-	0.13	11.7	0.0	0.29	10.6	0.0	1.6	1	0	0	1	1	1	0	PhoH-like	protein
TPR_2	PF07719.17	gi|429216804|ref|YP_007174794.1|	-	1.4	9.2	4.9	1	9.6	0.4	2.9	3	0	0	3	3	2	0	Tetratricopeptide	repeat
HTH_24	PF13412.6	gi|429216805|ref|YP_007174795.1|	-	0.007	15.9	0.2	0.007	15.9	0.2	2.7	3	0	0	3	3	3	1	Winged	helix-turn-helix	DNA-binding
Exog_C	PF18026.1	gi|429216805|ref|YP_007174795.1|	-	0.014	15.4	0.1	0.15	12.1	0.0	2.5	2	0	0	2	2	2	0	Endo/exonuclease	(EXOG)	C-terminal	domain
RPA_C	PF08784.11	gi|429216805|ref|YP_007174795.1|	-	0.072	13.8	0.3	28	5.4	0.0	3.0	2	2	2	4	4	4	0	Replication	protein	A	C	terminal
Aldo_ket_red	PF00248.21	gi|429216806|ref|YP_007174796.1|	-	7.8e-59	199.3	0.0	8.9e-59	199.1	0.0	1.0	1	0	0	1	1	1	1	Aldo/keto	reductase	family
Acetyltransf_1	PF00583.25	gi|429216807|ref|YP_007174797.1|	-	0.0083	16.4	0.1	0.047	13.9	0.0	2.0	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	family
Elf4	PF07011.11	gi|429216807|ref|YP_007174797.1|	-	0.054	13.4	0.0	0.12	12.3	0.0	1.5	1	0	0	1	1	1	0	Early	Flowering	4	domain
MR_MLE_C	PF13378.6	gi|429216808|ref|YP_007174798.1|	-	4.2e-35	121.3	0.0	5.3e-35	121.0	0.0	1.1	1	0	0	1	1	1	1	Enolase	C-terminal	domain-like
MR_MLE_N	PF02746.16	gi|429216808|ref|YP_007174798.1|	-	1.5e-12	47.8	0.0	2.6e-12	47.0	0.0	1.3	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	N-terminal	domain
CitMHS	PF03600.16	gi|429216809|ref|YP_007174799.1|	-	1.3e-40	139.5	5.7	1.3e-40	139.5	5.7	1.9	1	1	1	2	2	2	1	Citrate	transporter
TrkA_C	PF02080.21	gi|429216809|ref|YP_007174799.1|	-	8.3e-11	41.6	0.2	1.5e-07	31.2	0.0	3.7	2	1	1	3	3	3	2	TrkA-C	domain
Mut7-C	PF01927.16	gi|429216810|ref|YP_007174800.1|	-	1.5e-41	141.9	0.0	1.8e-41	141.7	0.0	1.0	1	0	0	1	1	1	1	Mut7-C	RNAse	domain
DUF5615	PF18480.1	gi|429216810|ref|YP_007174800.1|	-	0.00037	20.2	0.0	0.00067	19.4	0.0	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF5615)
TackOD1	PF18551.1	gi|429216810|ref|YP_007174800.1|	-	0.004	16.9	0.5	0.016	14.9	0.1	1.8	2	0	0	2	2	2	1	Thaumarchaeal	output	domain	1
Zn_ribbon_SprT	PF17283.2	gi|429216810|ref|YP_007174800.1|	-	0.0064	16.4	0.3	3.8	7.5	0.0	2.2	2	0	0	2	2	2	2	SprT-like	zinc	ribbon	domain
ADK_lid	PF05191.14	gi|429216810|ref|YP_007174800.1|	-	0.0075	16.2	0.5	1.9	8.6	0.1	2.5	2	0	0	2	2	2	1	Adenylate	kinase,	active	site	lid
DZR	PF12773.7	gi|429216810|ref|YP_007174800.1|	-	0.016	15.2	0.2	0.036	14.1	0.2	1.5	1	1	0	1	1	1	0	Double	zinc	ribbon
zf_CopZ	PF18423.1	gi|429216810|ref|YP_007174800.1|	-	0.017	15.1	0.6	0.028	14.4	0.6	1.3	1	0	0	1	1	1	0	Zinc	binding	domain
NMD3	PF04981.13	gi|429216810|ref|YP_007174800.1|	-	0.019	14.4	0.4	0.033	13.6	0.4	1.4	1	1	0	1	1	1	0	NMD3	family
zf-ribbon_3	PF13248.6	gi|429216810|ref|YP_007174800.1|	-	0.03	13.7	3.1	0.24	10.9	0.2	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
Zn-ribbon_8	PF09723.10	gi|429216810|ref|YP_007174800.1|	-	0.031	14.4	0.7	2.1	8.5	0.1	2.3	2	0	0	2	2	2	0	Zinc	ribbon	domain
HNH_5	PF14279.6	gi|429216810|ref|YP_007174800.1|	-	0.076	12.9	0.7	15	5.5	0.1	2.3	2	0	0	2	2	2	0	HNH	endonuclease
HypA	PF01155.19	gi|429216810|ref|YP_007174800.1|	-	0.083	12.9	0.0	0.12	12.4	0.0	1.3	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zf_UBZ	PF18439.1	gi|429216810|ref|YP_007174800.1|	-	0.33	10.6	4.4	5.3	6.7	0.1	2.9	3	0	0	3	3	3	0	Ubiquitin-Binding	Zinc	Finger
TF_Zn_Ribbon	PF08271.12	gi|429216810|ref|YP_007174800.1|	-	0.81	9.2	3.2	8.4	6.0	3.2	2.3	1	1	0	1	1	1	0	TFIIB	zinc-binding
CBS	PF00571.28	gi|429216811|ref|YP_007174801.1|	-	3.2e-29	101.2	1.6	1.2e-13	51.3	2.6	2.1	2	0	0	2	2	2	2	CBS	domain
IF3_N	PF05198.16	gi|429216811|ref|YP_007174801.1|	-	0.03	14.6	0.0	0.31	11.3	0.0	2.2	2	0	0	2	2	2	0	Translation	initiation	factor	IF-3,	N-terminal	domain
ParBc	PF02195.18	gi|429216812|ref|YP_007174802.1|	-	1.7e-08	34.7	0.1	3.3e-08	33.7	0.1	1.4	1	0	0	1	1	1	1	ParB-like	nuclease	domain
tRNA_anti-codon	PF01336.25	gi|429216813|ref|YP_007174803.1|	-	2.3e-08	33.9	0.4	3.6e-08	33.3	0.4	1.3	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
REPA_OB_2	PF16900.5	gi|429216813|ref|YP_007174803.1|	-	0.00072	19.4	0.2	0.00098	19.0	0.2	1.2	1	0	0	1	1	1	1	Replication	protein	A	OB	domain
DHO_dh	PF01180.21	gi|429216814|ref|YP_007174804.1|	-	9.4e-36	123.5	5.1	3.2e-35	121.8	5.1	1.7	1	1	0	1	1	1	1	Dihydroorotate	dehydrogenase
NMO	PF03060.15	gi|429216814|ref|YP_007174804.1|	-	0.11	11.9	0.0	0.17	11.2	0.0	1.2	1	0	0	1	1	1	0	Nitronate	monooxygenase
Lactamase_B	PF00753.27	gi|429216816|ref|YP_007174806.1|	-	3.3e-05	24.0	0.0	0.00023	21.2	0.0	2.0	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
TrkA_N	PF02254.18	gi|429216817|ref|YP_007174807.1|	-	5.7e-17	62.0	1.7	3.4e-16	59.5	2.3	1.9	3	0	0	3	3	3	1	TrkA-N	domain
TrkA_C	PF02080.21	gi|429216817|ref|YP_007174807.1|	-	7.4e-06	25.7	0.0	9.3e-05	22.2	0.0	2.6	3	0	0	3	3	3	1	TrkA-C	domain
Ion_trans_2	PF07885.16	gi|429216817|ref|YP_007174807.1|	-	0.68	9.9	8.3	1.3	9.1	8.3	1.5	1	0	0	1	1	1	0	Ion	channel
ATPase_2	PF01637.18	gi|429216818|ref|YP_007174808.1|	-	5.8e-21	75.5	0.6	1.2e-20	74.5	0.6	1.5	1	0	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
AAA_14	PF13173.6	gi|429216818|ref|YP_007174808.1|	-	1.7e-11	44.3	0.9	1.7e-09	37.8	0.1	3.2	2	2	1	3	3	3	1	AAA	domain
AAA_22	PF13401.6	gi|429216818|ref|YP_007174808.1|	-	2.5e-06	27.8	0.0	6.2e-06	26.5	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
AAA	PF00004.29	gi|429216818|ref|YP_007174808.1|	-	2.2e-05	24.9	0.0	0.00021	21.7	0.0	2.4	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.6	gi|429216818|ref|YP_007174808.1|	-	0.00014	22.3	0.0	0.00034	21.0	0.0	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
PLU-1	PF08429.11	gi|429216818|ref|YP_007174808.1|	-	0.01	15.0	0.1	0.017	14.3	0.1	1.2	1	0	0	1	1	1	0	PLU-1-like	protein
Spo0A_C	PF08769.11	gi|429216818|ref|YP_007174808.1|	-	0.17	12.0	0.7	0.79	9.8	0.2	2.3	2	1	1	3	3	3	0	Sporulation	initiation	factor	Spo0A	C	terminal
EFhand_Ca_insen	PF08726.10	gi|429216818|ref|YP_007174808.1|	-	0.18	11.9	0.0	0.33	11.1	0.0	1.4	1	0	0	1	1	1	0	Ca2+	insensitive	EF	hand
DUF2258	PF10015.9	gi|429216819|ref|YP_007174809.1|	-	1.4e-28	98.8	0.4	2.3e-28	98.1	0.4	1.3	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2258)
Metallophos	PF00149.28	gi|429216820|ref|YP_007174810.1|	-	2e-15	57.8	0.4	2.9e-15	57.3	0.4	1.3	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|429216820|ref|YP_007174810.1|	-	9e-11	42.2	0.0	4.2e-10	40.1	0.0	1.9	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Lar_N	PF09861.9	gi|429216820|ref|YP_007174810.1|	-	0.0011	18.2	0.1	0.0025	17.0	0.1	1.6	1	0	0	1	1	1	1	Lactate	racemase	N-terminal	domain
AAA_15	PF13175.6	gi|429216821|ref|YP_007174811.1|	-	4.6e-14	52.9	156.7	5.1e-11	42.9	33.8	4.3	1	1	2	3	3	3	2	AAA	ATPase	domain
AAA_13	PF13166.6	gi|429216821|ref|YP_007174811.1|	-	8.4e-11	41.3	120.2	6.3e-09	35.1	20.3	5.3	2	1	3	5	5	5	3	AAA	domain
SMC_N	PF02463.19	gi|429216821|ref|YP_007174811.1|	-	3.5e-09	36.4	0.4	3.5e-09	36.4	0.4	3.8	2	1	0	2	2	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_21	PF13304.6	gi|429216821|ref|YP_007174811.1|	-	8.8e-09	35.6	24.0	1e-05	25.5	13.4	4.6	1	1	0	3	3	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SbcCD_C	PF13558.6	gi|429216821|ref|YP_007174811.1|	-	2.9e-06	27.4	0.0	6.6e-06	26.3	0.0	1.6	1	0	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
ABC_tran_CTD	PF16326.5	gi|429216821|ref|YP_007174811.1|	-	4.2e-05	23.7	12.4	4.2e-05	23.7	12.4	9.9	6	3	5	11	11	10	1	ABC	transporter	C-terminal	domain
AAA_29	PF13555.6	gi|429216821|ref|YP_007174811.1|	-	8.6e-05	22.2	0.0	0.00016	21.3	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
Rad50_zn_hook	PF04423.14	gi|429216821|ref|YP_007174811.1|	-	0.00059	19.6	0.9	0.00059	19.6	0.9	10.3	11	3	2	13	13	13	1	Rad50	zinc	hook	motif
Spc7	PF08317.11	gi|429216821|ref|YP_007174811.1|	-	0.0014	17.6	115.7	0.077	11.9	30.1	5.7	1	1	3	6	6	6	5	Spc7	kinetochore	protein
DUF3450	PF11932.8	gi|429216821|ref|YP_007174811.1|	-	0.0035	16.7	75.2	0.04	13.2	16.3	7.0	3	2	4	7	7	7	4	Protein	of	unknown	function	(DUF3450)
AAA_23	PF13476.6	gi|429216821|ref|YP_007174811.1|	-	0.0051	17.3	170.2	1.8e+04	-17.7	113.4	7.7	1	1	1	2	2	0	0	AAA	domain
DUF3287	PF11690.8	gi|429216821|ref|YP_007174811.1|	-	0.007	16.1	1.6	0.007	16.1	1.6	4.0	3	1	1	4	4	4	1	Protein	of	unknown	function	(DUF3287)
AAA_16	PF13191.6	gi|429216821|ref|YP_007174811.1|	-	0.015	15.7	0.4	0.32	11.4	0.0	3.2	3	0	0	3	3	3	0	AAA	ATPase	domain
AAA_27	PF13514.6	gi|429216821|ref|YP_007174811.1|	-	0.13	11.9	0.0	0.13	11.9	0.0	5.2	4	2	3	7	7	7	0	AAA	domain
RsgA_GTPase	PF03193.16	gi|429216821|ref|YP_007174811.1|	-	0.65	9.9	0.0	0.65	9.9	0.0	5.3	3	2	2	6	6	6	0	RsgA	GTPase
PilJ	PF13675.6	gi|429216821|ref|YP_007174811.1|	-	1.4	9.0	8.8	1.6	8.8	1.2	3.8	3	1	1	4	4	4	0	Type	IV	pili	methyl-accepting	chemotaxis	transducer	N-term
Fe-S_assembly	PF04384.13	gi|429216821|ref|YP_007174811.1|	-	2.4	8.8	15.6	1.6	9.4	0.1	5.3	4	1	0	4	4	4	0	Iron-sulphur	cluster	assembly
DUF1644	PF07800.12	gi|429216821|ref|YP_007174811.1|	-	2.7	8.0	10.8	0.15	12.1	2.0	3.3	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1644)
SRP1_TIP1	PF00660.17	gi|429216821|ref|YP_007174811.1|	-	9.5	6.4	17.3	4.1	7.5	0.4	4.9	5	1	1	6	6	5	0	Seripauperin	and	TIP1	family
NurA	PF09376.10	gi|429216822|ref|YP_007174812.1|	-	4.3e-15	56.1	0.0	8.4e-15	55.1	0.0	1.4	1	1	0	1	1	1	1	NurA	domain
DUF87	PF01935.17	gi|429216823|ref|YP_007174813.1|	-	1.2e-44	153.1	0.8	1.8e-44	152.5	0.8	1.3	1	0	0	1	1	1	1	Helicase	HerA,	central	domain
DUF853	PF05872.12	gi|429216823|ref|YP_007174813.1|	-	3.3e-05	22.7	0.0	0.0019	16.9	0.0	2.2	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
TrwB_AAD_bind	PF10412.9	gi|429216823|ref|YP_007174813.1|	-	0.067	12.1	0.0	0.51	9.2	0.0	2.0	2	0	0	2	2	2	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
SBP_bac_5	PF00496.22	gi|429216824|ref|YP_007174814.1|	-	1e-51	176.1	8.1	2.2e-51	175.0	8.1	1.5	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
PKD	PF00801.20	gi|429216824|ref|YP_007174814.1|	-	1.3e-06	28.1	0.0	0.00019	21.2	0.0	3.1	3	0	0	3	3	3	2	PKD	domain
Spermine_synth	PF01564.17	gi|429216825|ref|YP_007174815.1|	-	4e-09	36.2	0.0	1.4e-08	34.4	0.0	1.7	2	0	0	2	2	2	1	Spermine/spermidine	synthase	domain
MTS	PF05175.14	gi|429216825|ref|YP_007174815.1|	-	7.9e-06	25.5	0.0	1.4e-05	24.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Cons_hypoth95	PF03602.15	gi|429216825|ref|YP_007174815.1|	-	5.7e-05	22.8	0.0	9.3e-05	22.1	0.0	1.3	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
PrmA	PF06325.13	gi|429216825|ref|YP_007174815.1|	-	5.9e-05	22.6	0.0	9.7e-05	21.9	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
PCMT	PF01135.19	gi|429216825|ref|YP_007174815.1|	-	0.0001	22.1	0.0	0.00015	21.6	0.0	1.3	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_30	PF05430.11	gi|429216825|ref|YP_007174815.1|	-	0.0002	21.2	0.0	0.00043	20.2	0.0	1.6	1	1	0	1	1	1	1	S-adenosyl-L-methionine-dependent	methyltransferase
Methyltransf_15	PF09445.10	gi|429216825|ref|YP_007174815.1|	-	0.00027	20.6	0.0	0.00048	19.7	0.0	1.4	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_31	PF13847.6	gi|429216825|ref|YP_007174815.1|	-	0.00061	19.6	0.0	0.0013	18.5	0.0	1.5	2	0	0	2	2	2	1	Methyltransferase	domain
RrnaAD	PF00398.20	gi|429216825|ref|YP_007174815.1|	-	0.0056	15.8	0.1	0.015	14.4	0.0	1.6	2	0	0	2	2	2	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_25	PF13649.6	gi|429216825|ref|YP_007174815.1|	-	0.006	17.3	0.0	0.0097	16.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.7	gi|429216825|ref|YP_007174815.1|	-	0.0061	16.5	0.0	0.012	15.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.20	gi|429216825|ref|YP_007174815.1|	-	0.011	15.0	0.0	0.022	14.1	0.0	1.4	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
Methyltransf_24	PF13578.6	gi|429216825|ref|YP_007174815.1|	-	0.015	16.4	0.0	0.055	14.5	0.0	1.9	2	0	0	2	2	2	0	Methyltransferase	domain
UPF0020	PF01170.18	gi|429216825|ref|YP_007174815.1|	-	0.021	14.5	0.0	0.03	14.0	0.0	1.2	1	0	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
N6-adenineMlase	PF10237.9	gi|429216825|ref|YP_007174815.1|	-	0.076	12.8	0.0	0.14	12.0	0.0	1.4	1	0	0	1	1	1	0	Probable	N6-adenine	methyltransferase
Nitro_FeMo-Co	PF02579.17	gi|429216826|ref|YP_007174816.1|	-	0.028	14.8	0.0	0.04	14.3	0.0	1.1	1	0	0	1	1	1	0	Dinitrogenase	iron-molybdenum	cofactor
MS_channel	PF00924.18	gi|429216827|ref|YP_007174817.1|	-	3.5e-16	59.4	0.7	3.5e-16	59.4	0.7	2.0	2	0	0	2	2	2	1	Mechanosensitive	ion	channel
EamA	PF00892.20	gi|429216828|ref|YP_007174818.1|	-	6.6e-25	87.9	37.4	9.9e-16	58.2	21.1	2.0	2	0	0	2	2	2	2	EamA-like	transporter	family
TMEM234	PF10639.9	gi|429216828|ref|YP_007174818.1|	-	0.0019	18.2	7.8	0.082	12.9	0.1	2.5	2	1	0	2	2	2	2	Putative	transmembrane	family	234
HTH_5	PF01022.20	gi|429216829|ref|YP_007174819.1|	-	5.5e-15	55.0	0.1	1e-14	54.1	0.1	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
TrmB	PF01978.19	gi|429216829|ref|YP_007174819.1|	-	0.00018	21.3	0.1	0.00052	19.8	0.0	1.6	1	1	1	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_20	PF12840.7	gi|429216829|ref|YP_007174819.1|	-	0.00021	21.3	0.0	0.00027	20.9	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.6	gi|429216829|ref|YP_007174819.1|	-	0.0015	18.1	0.0	0.003	17.1	0.0	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_34	PF13601.6	gi|429216829|ref|YP_007174819.1|	-	0.0015	18.7	0.0	0.003	17.7	0.0	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_IclR	PF09339.10	gi|429216829|ref|YP_007174819.1|	-	0.062	13.1	0.0	0.084	12.7	0.0	1.2	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_9	PF08221.11	gi|429216829|ref|YP_007174819.1|	-	0.081	13.0	0.2	0.23	11.6	0.1	1.7	2	0	0	2	2	2	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
HrcA_DNA-bdg	PF03444.15	gi|429216829|ref|YP_007174819.1|	-	0.36	10.5	1.7	0.77	9.5	0.1	2.2	2	1	1	3	3	3	0	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
Arc_trans_TRASH	PF08394.10	gi|429216830|ref|YP_007174820.1|	-	3.5e-05	24.0	2.9	4.9e-05	23.6	2.9	1.2	1	0	0	1	1	1	1	Archaeal	TRASH	domain
zf-FCS	PF06467.14	gi|429216830|ref|YP_007174820.1|	-	0.00017	21.4	2.2	0.00026	20.8	2.2	1.4	1	1	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
zf_C2H2_13	PF18508.1	gi|429216830|ref|YP_007174820.1|	-	0.0039	16.7	2.7	0.0039	16.7	2.7	1.9	1	1	0	1	1	1	1	Zinc	finger	domain
ATPase-cat_bd	PF12156.8	gi|429216830|ref|YP_007174820.1|	-	0.0047	17.6	3.0	0.005	17.5	3.0	1.1	1	0	0	1	1	1	1	Putative	metal-binding	domain	of	cation	transport	ATPase
Ta0938	PF11494.8	gi|429216830|ref|YP_007174820.1|	-	0.0056	16.9	0.4	0.0058	16.9	0.4	1.1	1	0	0	1	1	1	1	Ta0938
Zn_ribbon_recom	PF13408.6	gi|429216830|ref|YP_007174820.1|	-	0.0073	16.8	1.7	0.0093	16.5	1.7	1.2	1	0	0	1	1	1	1	Recombinase	zinc	beta	ribbon	domain
Zn_ribbon_2	PF12674.7	gi|429216830|ref|YP_007174820.1|	-	0.014	16.0	1.8	0.016	15.8	1.8	1.1	1	0	0	1	1	1	0	Putative	zinc	ribbon	domain
LIM	PF00412.22	gi|429216830|ref|YP_007174820.1|	-	0.031	14.5	4.5	0.31	11.3	4.5	1.9	1	1	0	1	1	1	0	LIM	domain
Nudix_N_2	PF14803.6	gi|429216830|ref|YP_007174820.1|	-	0.089	12.7	5.4	4.3	7.3	0.1	2.6	1	1	1	2	2	2	0	Nudix	N-terminal
YHS	PF04945.13	gi|429216830|ref|YP_007174820.1|	-	0.16	12.1	3.9	0.19	11.9	3.9	1.4	1	1	0	1	1	1	0	YHS	domain
Pyr_redox_2	PF07992.14	gi|429216831|ref|YP_007174821.1|	-	1.5e-61	208.2	0.4	2.3e-61	207.6	0.4	1.2	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.22	gi|429216831|ref|YP_007174821.1|	-	8e-33	113.0	0.5	1.7e-32	112.0	0.2	1.7	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.27	gi|429216831|ref|YP_007174821.1|	-	1.6e-14	54.2	0.4	1.6e-14	54.2	0.4	2.8	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|429216831|ref|YP_007174821.1|	-	6.6e-12	45.3	10.5	1.3e-10	41.1	10.5	3.3	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.22	gi|429216831|ref|YP_007174821.1|	-	5.9e-10	38.8	8.4	0.0024	17.0	0.2	4.7	4	1	1	5	5	5	4	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.14	gi|429216831|ref|YP_007174821.1|	-	3.4e-06	26.0	5.3	0.12	11.0	0.1	3.9	4	0	0	4	4	4	3	HI0933-like	protein
FAD_binding_3	PF01494.19	gi|429216831|ref|YP_007174821.1|	-	0.0036	16.6	0.2	0.0065	15.7	0.2	1.4	1	0	0	1	1	1	1	FAD	binding	domain
Sipho_tail	PF05709.11	gi|429216831|ref|YP_007174821.1|	-	0.0092	15.4	0.0	0.012	15.0	0.0	1.2	1	0	0	1	1	1	1	Phage	tail	protein
FAD_binding_2	PF00890.24	gi|429216831|ref|YP_007174821.1|	-	0.011	14.8	3.3	5.3	6.0	0.7	3.1	3	0	0	3	3	3	0	FAD	binding	domain
FAD_oxidored	PF12831.7	gi|429216831|ref|YP_007174821.1|	-	0.014	14.7	0.0	0.33	10.3	0.0	2.3	2	0	0	2	2	2	0	FAD	dependent	oxidoreductase
Lycopene_cycl	PF05834.12	gi|429216831|ref|YP_007174821.1|	-	0.015	14.4	2.2	0.18	10.8	0.1	2.3	2	0	0	2	2	2	0	Lycopene	cyclase	protein
2-Hacid_dh_C	PF02826.19	gi|429216831|ref|YP_007174821.1|	-	0.015	14.6	0.0	0.19	11.0	0.0	2.4	2	0	0	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
AlaDh_PNT_C	PF01262.21	gi|429216831|ref|YP_007174821.1|	-	0.026	13.8	0.5	1.4	8.2	0.0	2.6	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
NAD_binding_8	PF13450.6	gi|429216831|ref|YP_007174821.1|	-	0.027	14.7	0.9	0.087	13.1	0.0	2.1	2	0	0	2	2	2	0	NAD(P)-binding	Rossmann-like	domain
Hydantoinase_A	PF01968.18	gi|429216832|ref|YP_007174822.1|	-	1.3e-94	316.8	7.1	6.5e-94	314.4	0.3	2.7	3	0	0	3	3	3	2	Hydantoinase/oxoprolinase
Hydant_A_N	PF05378.13	gi|429216832|ref|YP_007174822.1|	-	4.8e-50	169.7	0.2	1.4e-49	168.2	0.0	1.8	2	0	0	2	2	2	1	Hydantoinase/oxoprolinase	N-terminal	region
BcrAD_BadFG	PF01869.20	gi|429216832|ref|YP_007174822.1|	-	0.0023	17.5	0.7	0.17	11.4	0.1	2.3	2	0	0	2	2	2	2	BadF/BadG/BcrA/BcrD	ATPase	family
MutL	PF13941.6	gi|429216832|ref|YP_007174822.1|	-	0.0035	16.0	2.8	0.99	7.9	0.1	3.0	3	0	0	3	3	3	2	MutL	protein
ROK	PF00480.20	gi|429216832|ref|YP_007174822.1|	-	0.0095	15.4	0.7	0.017	14.6	0.1	1.7	2	0	0	2	2	2	1	ROK	family
Hydantoinase_B	PF02538.14	gi|429216833|ref|YP_007174823.1|	-	1.3e-175	584.7	0.0	1.5e-175	584.5	0.0	1.0	1	0	0	1	1	1	1	Hydantoinase	B/oxoprolinase
SBP_bac_5	PF00496.22	gi|429216834|ref|YP_007174824.1|	-	5.7e-41	140.7	6.6	9.5e-41	140.0	6.6	1.3	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
DUF3149	PF11346.8	gi|429216834|ref|YP_007174824.1|	-	0.096	12.3	0.4	0.24	11.1	0.4	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3149)
AdoMet_dc	PF02675.15	gi|429216835|ref|YP_007174825.1|	-	9.5e-32	109.4	0.0	1.1e-31	109.2	0.0	1.1	1	0	0	1	1	1	1	S-adenosylmethionine	decarboxylase
DUF2480	PF10652.9	gi|429216835|ref|YP_007174825.1|	-	0.027	14.4	0.0	0.039	13.9	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2480)
Thioredoxin	PF00085.20	gi|429216836|ref|YP_007174826.1|	-	6.9e-28	96.7	0.0	9.7e-28	96.2	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.6	gi|429216836|ref|YP_007174826.1|	-	4.3e-09	36.8	0.4	1.6e-08	34.9	0.1	2.0	2	1	0	2	2	2	1	Thioredoxin-like	domain
Thioredoxin_8	PF13905.6	gi|429216836|ref|YP_007174826.1|	-	1.1e-06	28.9	0.2	5.4e-06	26.6	0.0	2.1	2	1	0	2	2	2	1	Thioredoxin-like
Redoxin	PF08534.10	gi|429216836|ref|YP_007174826.1|	-	0.001	18.8	0.0	0.0013	18.5	0.0	1.3	1	0	0	1	1	1	1	Redoxin
OST3_OST6	PF04756.13	gi|429216836|ref|YP_007174826.1|	-	0.0018	17.7	0.0	0.0025	17.2	0.0	1.2	1	0	0	1	1	1	1	OST3	/	OST6	family,	transporter	family
Thioredoxin_3	PF13192.6	gi|429216836|ref|YP_007174826.1|	-	0.0025	17.8	0.0	0.0053	16.8	0.0	1.6	1	0	0	1	1	1	1	Thioredoxin	domain
TraF	PF13728.6	gi|429216836|ref|YP_007174826.1|	-	0.0045	16.8	0.0	0.0061	16.4	0.0	1.3	1	0	0	1	1	1	1	F	plasmid	transfer	operon	protein
Phosducin	PF02114.16	gi|429216836|ref|YP_007174826.1|	-	0.016	14.2	0.0	0.02	13.8	0.0	1.3	1	1	0	1	1	1	0	Phosducin
ANTH	PF07651.16	gi|429216837|ref|YP_007174827.1|	-	0.039	13.0	0.1	0.055	12.4	0.1	1.1	1	0	0	1	1	1	0	ANTH	domain
Pyr_redox_2	PF07992.14	gi|429216838|ref|YP_007174828.1|	-	2.6e-49	168.0	0.1	3.1e-49	167.8	0.1	1.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|429216838|ref|YP_007174828.1|	-	1.6e-17	63.8	1.4	1.1e-13	51.5	0.6	3.4	4	0	0	4	4	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.22	gi|429216838|ref|YP_007174828.1|	-	6.2e-17	61.9	0.0	1.6e-16	60.5	0.0	1.7	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox_3	PF13738.6	gi|429216838|ref|YP_007174828.1|	-	1.1e-14	54.4	3.6	2.5e-12	46.7	2.5	2.2	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.24	gi|429216838|ref|YP_007174828.1|	-	1.6e-07	31.3	0.4	0.042	13.4	0.0	3.3	3	1	1	4	4	4	2	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.6	gi|429216838|ref|YP_007174828.1|	-	2.4e-07	30.9	0.0	0.039	14.2	0.0	2.6	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.14	gi|429216838|ref|YP_007174828.1|	-	1e-06	27.8	0.5	0.065	11.9	0.1	3.7	4	0	0	4	4	4	2	HI0933-like	protein
TrkA_N	PF02254.18	gi|429216838|ref|YP_007174828.1|	-	3e-06	27.5	0.0	0.0025	18.0	0.1	2.5	2	0	0	2	2	2	1	TrkA-N	domain
GIDA	PF01134.22	gi|429216838|ref|YP_007174828.1|	-	2.9e-05	23.3	1.3	0.025	13.7	0.1	3.0	3	0	0	3	3	3	2	Glucose	inhibited	division	protein	A
F420_oxidored	PF03807.17	gi|429216838|ref|YP_007174828.1|	-	6.2e-05	23.5	1.5	0.045	14.3	0.1	3.4	3	0	0	3	3	3	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_Gly3P_dh_N	PF01210.23	gi|429216838|ref|YP_007174828.1|	-	7e-05	22.9	0.3	0.0037	17.3	0.1	3.0	3	0	0	3	3	3	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
FAD_binding_2	PF00890.24	gi|429216838|ref|YP_007174828.1|	-	0.0005	19.3	0.5	1.3	8.0	0.0	3.1	3	0	0	3	3	3	2	FAD	binding	domain
3HCDH_N	PF02737.18	gi|429216838|ref|YP_007174828.1|	-	0.00059	19.8	0.4	0.0013	18.6	0.1	1.8	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_9	PF13454.6	gi|429216838|ref|YP_007174828.1|	-	0.0015	18.5	0.1	1.1	9.2	0.0	2.6	2	0	0	2	2	2	2	FAD-NAD(P)-binding
FAD_binding_3	PF01494.19	gi|429216838|ref|YP_007174828.1|	-	0.0022	17.3	0.3	0.055	12.7	0.2	2.2	2	0	0	2	2	2	1	FAD	binding	domain
K_oxygenase	PF13434.6	gi|429216838|ref|YP_007174828.1|	-	0.0023	17.1	0.1	0.079	12.1	0.0	2.6	2	1	1	3	3	3	1	L-lysine	6-monooxygenase	(NADPH-requiring)
NAD_binding_7	PF13241.6	gi|429216838|ref|YP_007174828.1|	-	0.0025	18.2	0.0	0.14	12.6	0.0	2.5	2	0	0	2	2	2	1	Putative	NAD(P)-binding
Lycopene_cycl	PF05834.12	gi|429216838|ref|YP_007174828.1|	-	0.012	14.6	0.2	2.7	7.0	0.1	2.2	2	0	0	2	2	2	0	Lycopene	cyclase	protein
Thi4	PF01946.17	gi|429216838|ref|YP_007174828.1|	-	0.013	14.8	0.1	0.71	9.1	0.0	2.3	2	0	0	2	2	2	0	Thi4	family
AlaDh_PNT_C	PF01262.21	gi|429216838|ref|YP_007174828.1|	-	0.019	14.3	0.1	0.97	8.7	0.1	2.3	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
FAD_oxidored	PF12831.7	gi|429216838|ref|YP_007174828.1|	-	0.025	13.9	0.0	0.18	11.1	0.0	2.1	2	0	0	2	2	2	0	FAD	dependent	oxidoreductase
Trp_halogenase	PF04820.14	gi|429216838|ref|YP_007174828.1|	-	0.085	11.7	0.6	2.4	6.9	0.0	2.1	2	0	0	2	2	2	0	Tryptophan	halogenase
Cpn10	PF00166.21	gi|429216838|ref|YP_007174828.1|	-	0.088	12.9	0.5	0.29	11.2	0.5	1.9	1	0	0	1	1	1	0	Chaperonin	10	Kd	subunit
ApbA	PF02558.16	gi|429216838|ref|YP_007174828.1|	-	0.091	12.4	0.1	0.19	11.4	0.1	1.6	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
SBP_bac_5	PF00496.22	gi|429216839|ref|YP_007174829.1|	-	6.7e-51	173.4	9.2	2.2e-50	171.7	6.5	2.5	2	0	0	2	2	2	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
PKD	PF00801.20	gi|429216839|ref|YP_007174829.1|	-	0.07	13.0	0.0	0.07	13.0	0.0	4.3	5	1	0	5	5	5	0	PKD	domain
Shisa	PF13908.6	gi|429216839|ref|YP_007174829.1|	-	2.3	8.4	4.6	5	7.3	4.6	1.5	1	0	0	1	1	1	0	Wnt	and	FGF	inhibitory	regulator
Alpha_GJ	PF03229.13	gi|429216839|ref|YP_007174829.1|	-	8.8	6.9	8.5	20	5.8	8.5	1.6	1	0	0	1	1	1	0	Alphavirus	glycoprotein	J
MoCF_biosynth	PF00994.24	gi|429216840|ref|YP_007174830.1|	-	1.7e-26	92.6	0.1	2.1e-26	92.3	0.1	1.0	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
WIYLD	PF10440.9	gi|429216840|ref|YP_007174830.1|	-	0.059	13.2	0.1	0.12	12.2	0.1	1.5	1	0	0	1	1	1	0	Ubiquitin-binding	WIYLD	domain
PNP_UDP_1	PF01048.20	gi|429216841|ref|YP_007174831.1|	-	2.1e-47	161.4	0.0	2.4e-47	161.2	0.0	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
DUF2977	PF11192.8	gi|429216841|ref|YP_007174831.1|	-	0.014	15.5	0.0	0.037	14.2	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2977)
BLOC1_2	PF10046.9	gi|429216842|ref|YP_007174832.1|	-	0.099	12.9	0.0	0.24	11.7	0.0	1.6	1	0	0	1	1	1	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Baculo_gp64	PF03273.13	gi|429216842|ref|YP_007174832.1|	-	0.14	11.0	0.1	0.19	10.5	0.1	1.1	1	0	0	1	1	1	0	Baculovirus	gp64	envelope	glycoprotein	family
PTH2	PF01981.16	gi|429216843|ref|YP_007174833.1|	-	1.2e-41	141.7	0.0	1.3e-41	141.5	0.0	1.0	1	0	0	1	1	1	1	Peptidyl-tRNA	hydrolase	PTH2
HTH_ParB	PF17762.1	gi|429216843|ref|YP_007174833.1|	-	0.0036	17.1	0.4	2.8	7.8	0.0	2.2	2	0	0	2	2	2	2	HTH	domain	found	in	ParB	protein
SnoaL_4	PF13577.6	gi|429216843|ref|YP_007174833.1|	-	0.045	13.9	0.0	0.056	13.6	0.0	1.2	1	0	0	1	1	1	0	SnoaL-like	domain
DUF2000	PF09391.10	gi|429216843|ref|YP_007174833.1|	-	0.12	12.2	0.0	2.5	8.0	0.0	2.6	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2000)
Pribosyltran	PF00156.27	gi|429216844|ref|YP_007174834.1|	-	2.2e-17	63.1	0.0	3.1e-17	62.6	0.0	1.2	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.6	gi|429216844|ref|YP_007174834.1|	-	0.017	14.6	0.0	0.022	14.2	0.0	1.1	1	0	0	1	1	1	0	Uracil	phosphoribosyltransferase
PRTase_2	PF15609.6	gi|429216844|ref|YP_007174834.1|	-	0.24	10.9	0.0	0.34	10.4	0.0	1.2	1	0	0	1	1	1	0	Phosphoribosyl	transferase
PK	PF00224.21	gi|429216845|ref|YP_007174835.1|	-	5.6e-83	278.7	3.2	7.1e-83	278.4	3.2	1.1	1	0	0	1	1	1	1	Pyruvate	kinase,	barrel	domain
PK_C	PF02887.16	gi|429216845|ref|YP_007174835.1|	-	5.4e-09	36.3	0.0	1.2e-08	35.2	0.0	1.5	1	0	0	1	1	1	1	Pyruvate	kinase,	alpha/beta	domain
HpcH_HpaI	PF03328.14	gi|429216845|ref|YP_007174835.1|	-	5.2e-06	25.8	0.1	1.3e-05	24.5	0.1	1.7	1	0	0	1	1	1	1	HpcH/HpaI	aldolase/citrate	lyase	family
IMPDH	PF00478.25	gi|429216845|ref|YP_007174835.1|	-	0.018	14.1	0.0	0.06	12.3	0.0	1.8	1	0	0	1	1	1	0	IMP	dehydrogenase	/	GMP	reductase	domain
DUF2204	PF09970.9	gi|429216846|ref|YP_007174836.1|	-	2.9e-50	170.4	5.9	3.3e-50	170.3	5.9	1.0	1	0	0	1	1	1	1	Nucleotidyl	transferase	of	unknown	function	(DUF2204)
Peripla_BP_6	PF13458.6	gi|429216847|ref|YP_007174837.1|	-	5.6e-52	177.5	2.9	6.8e-52	177.2	2.9	1.0	1	0	0	1	1	1	1	Periplasmic	binding	protein
Peripla_BP_5	PF13433.6	gi|429216847|ref|YP_007174837.1|	-	9.1e-09	34.8	0.4	2.3e-08	33.4	0.7	1.5	2	0	0	2	2	2	1	Periplasmic	binding	protein	domain
ANF_receptor	PF01094.28	gi|429216847|ref|YP_007174837.1|	-	2.4e-05	23.6	0.2	4.4e-05	22.7	0.2	1.3	1	1	0	1	1	1	1	Receptor	family	ligand	binding	region
PBCV_basic_adap	PF08789.10	gi|429216847|ref|YP_007174837.1|	-	0.13	12.4	0.8	0.24	11.6	0.8	1.3	1	0	0	1	1	1	0	PBCV-specific	basic	adaptor	domain
ABC_tran	PF00005.27	gi|429216848|ref|YP_007174838.1|	-	2.9e-22	79.7	0.0	4.1e-22	79.2	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
BCA_ABC_TP_C	PF12399.8	gi|429216848|ref|YP_007174838.1|	-	2e-06	27.6	0.0	3.2e-06	26.9	0.0	1.4	1	0	0	1	1	1	1	Branched-chain	amino	acid	ATP-binding	cassette	transporter
AAA	PF00004.29	gi|429216848|ref|YP_007174838.1|	-	5.1e-05	23.7	0.7	0.0011	19.4	0.3	2.5	1	1	1	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
SMC_N	PF02463.19	gi|429216848|ref|YP_007174838.1|	-	9.4e-05	21.9	0.0	0.047	13.1	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.6	gi|429216848|ref|YP_007174838.1|	-	0.00049	19.8	0.0	0.0009	18.9	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_30	PF13604.6	gi|429216848|ref|YP_007174838.1|	-	0.00062	19.5	0.0	0.02	14.6	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_23	PF13476.6	gi|429216848|ref|YP_007174838.1|	-	0.0024	18.4	0.4	0.0082	16.7	0.0	1.8	1	1	0	2	2	2	1	AAA	domain
RsgA_GTPase	PF03193.16	gi|429216848|ref|YP_007174838.1|	-	0.0061	16.5	0.1	0.013	15.4	0.1	1.5	1	0	0	1	1	1	1	RsgA	GTPase
AAA_15	PF13175.6	gi|429216848|ref|YP_007174838.1|	-	0.0086	15.8	0.3	0.024	14.3	0.0	1.8	2	1	0	2	2	2	1	AAA	ATPase	domain
MukB	PF04310.12	gi|429216848|ref|YP_007174838.1|	-	0.009	15.8	0.0	0.016	15.0	0.0	1.3	1	0	0	1	1	1	1	MukB	N-terminal
NTPase_1	PF03266.15	gi|429216848|ref|YP_007174838.1|	-	0.011	15.7	0.4	1.5	8.8	0.1	2.3	2	0	0	2	2	2	0	NTPase
AAA_14	PF13173.6	gi|429216848|ref|YP_007174838.1|	-	0.013	15.6	0.1	6.1	6.9	0.0	2.3	2	1	0	2	2	2	0	AAA	domain
AAA_22	PF13401.6	gi|429216848|ref|YP_007174838.1|	-	0.019	15.2	0.0	0.1	12.9	0.0	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_21	PF13304.6	gi|429216848|ref|YP_007174838.1|	-	0.024	14.4	0.0	0.052	13.4	0.0	1.5	2	0	0	2	2	2	0	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
Zeta_toxin	PF06414.12	gi|429216848|ref|YP_007174838.1|	-	0.085	12.1	0.0	0.15	11.3	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
AAA_16	PF13191.6	gi|429216848|ref|YP_007174838.1|	-	0.1	13.0	0.0	0.23	11.8	0.0	1.6	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_33	PF13671.6	gi|429216848|ref|YP_007174838.1|	-	0.14	12.3	0.0	0.21	11.7	0.0	1.3	1	1	0	1	1	1	0	AAA	domain
Rad17	PF03215.15	gi|429216848|ref|YP_007174838.1|	-	0.15	12.0	0.0	0.26	11.2	0.0	1.5	1	1	0	1	1	1	0	Rad17	P-loop	domain
DUF3726	PF12525.8	gi|429216848|ref|YP_007174838.1|	-	0.16	12.1	1.0	1.6	8.9	0.1	2.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3726)
ABC_tran	PF00005.27	gi|429216849|ref|YP_007174839.1|	-	1.8e-31	109.5	0.2	2.4e-31	109.0	0.2	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|429216849|ref|YP_007174839.1|	-	6.9e-12	45.8	3.7	9e-08	32.3	0.0	2.2	1	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|429216849|ref|YP_007174839.1|	-	1.9e-10	40.5	1.1	3.6e-10	39.6	1.1	1.4	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.6	gi|429216849|ref|YP_007174839.1|	-	0.00016	22.2	0.2	0.00016	22.2	0.2	1.9	1	1	1	2	2	2	1	AAA	domain
AAA_15	PF13175.6	gi|429216849|ref|YP_007174839.1|	-	0.00027	20.8	6.0	0.0038	17.0	6.6	2.0	1	1	1	2	2	2	1	AAA	ATPase	domain
Arf	PF00025.21	gi|429216849|ref|YP_007174839.1|	-	0.00065	19.2	0.3	0.0014	18.1	0.3	1.5	1	0	0	1	1	1	1	ADP-ribosylation	factor	family
AAA_29	PF13555.6	gi|429216849|ref|YP_007174839.1|	-	0.0013	18.4	0.1	0.0028	17.3	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
Mg_chelatase	PF01078.21	gi|429216849|ref|YP_007174839.1|	-	0.0038	16.6	0.2	2	7.8	0.0	2.1	1	1	1	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
SRP54	PF00448.22	gi|429216849|ref|YP_007174839.1|	-	0.01	15.5	0.5	0.017	14.7	0.5	1.5	1	1	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
AAA_14	PF13173.6	gi|429216849|ref|YP_007174839.1|	-	0.011	15.8	0.7	0.028	14.5	0.6	1.7	1	1	0	1	1	1	0	AAA	domain
NACHT	PF05729.12	gi|429216849|ref|YP_007174839.1|	-	0.013	15.5	0.5	0.032	14.2	0.2	1.7	2	0	0	2	2	2	0	NACHT	domain
DUF3584	PF12128.8	gi|429216849|ref|YP_007174839.1|	-	0.014	12.9	0.1	0.021	12.3	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
AAA_27	PF13514.6	gi|429216849|ref|YP_007174839.1|	-	0.02	14.5	0.0	0.036	13.7	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
RsgA_GTPase	PF03193.16	gi|429216849|ref|YP_007174839.1|	-	0.023	14.6	0.0	0.053	13.4	0.0	1.6	1	0	0	1	1	1	0	RsgA	GTPase
AAA_30	PF13604.6	gi|429216849|ref|YP_007174839.1|	-	0.043	13.5	0.0	0.18	11.5	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
AAA_16	PF13191.6	gi|429216849|ref|YP_007174839.1|	-	0.054	13.9	0.2	0.099	13.0	0.2	1.7	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_33	PF13671.6	gi|429216849|ref|YP_007174839.1|	-	0.057	13.6	0.0	0.1	12.7	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
AAA	PF00004.29	gi|429216849|ref|YP_007174839.1|	-	0.086	13.3	0.9	0.32	11.4	0.9	2.0	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
BPD_transp_2	PF02653.16	gi|429216850|ref|YP_007174840.1|	-	1e-29	103.6	40.1	1e-29	103.6	40.1	1.4	2	0	0	2	2	2	1	Branched-chain	amino	acid	transport	system	/	permease	component
BPD_transp_2	PF02653.16	gi|429216851|ref|YP_007174841.1|	-	1.8e-30	106.0	42.1	2.3e-30	105.7	42.1	1.1	1	0	0	1	1	1	1	Branched-chain	amino	acid	transport	system	/	permease	component
Erythrovirus_X	PF06795.11	gi|429216851|ref|YP_007174841.1|	-	7	7.0	8.1	2.2	8.7	0.1	3.3	3	1	0	3	3	3	0	Erythrovirus	X	protein
DHH	PF01368.20	gi|429216853|ref|YP_007174843.1|	-	1.3e-05	25.4	0.1	2.4e-05	24.5	0.1	1.4	1	0	0	1	1	1	1	DHH	family
DHHA1	PF02272.19	gi|429216853|ref|YP_007174843.1|	-	6e-05	23.5	0.2	9.9e-05	22.8	0.2	1.3	1	0	0	1	1	1	1	DHHA1	domain
Pyr_redox_2	PF07992.14	gi|429216854|ref|YP_007174844.1|	-	7.9e-07	28.6	0.0	1.1e-06	28.1	0.0	1.4	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.6	gi|429216854|ref|YP_007174844.1|	-	0.00026	21.2	0.0	0.00074	19.7	0.0	1.8	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
3HCDH_N	PF02737.18	gi|429216854|ref|YP_007174844.1|	-	0.04	13.8	0.0	0.07	13.0	0.0	1.4	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
HI0933_like	PF03486.14	gi|429216854|ref|YP_007174844.1|	-	0.054	12.2	0.0	0.089	11.5	0.0	1.3	1	0	0	1	1	1	0	HI0933-like	protein
UDPG_MGDP_dh_N	PF03721.14	gi|429216854|ref|YP_007174844.1|	-	0.061	12.9	0.1	1.5	8.4	0.0	2.2	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Peripla_BP_6	PF13458.6	gi|429216856|ref|YP_007174846.1|	-	7.5e-44	150.8	2.0	9.6e-44	150.4	2.0	1.0	1	0	0	1	1	1	1	Periplasmic	binding	protein
Peripla_BP_5	PF13433.6	gi|429216856|ref|YP_007174846.1|	-	9.8e-07	28.1	1.4	5e-06	25.8	1.4	1.9	1	1	0	1	1	1	1	Periplasmic	binding	protein	domain
ANF_receptor	PF01094.28	gi|429216856|ref|YP_007174846.1|	-	0.00086	18.5	0.5	0.0025	17.0	0.5	1.7	1	1	0	1	1	1	1	Receptor	family	ligand	binding	region
DUF21	PF01595.20	gi|429216856|ref|YP_007174846.1|	-	0.0066	16.2	1.8	0.013	15.2	1.8	1.4	1	0	0	1	1	1	1	Cyclin	M	transmembrane	N-terminal	domain
PBCV_basic_adap	PF08789.10	gi|429216856|ref|YP_007174846.1|	-	0.14	12.3	0.8	0.24	11.5	0.8	1.3	1	0	0	1	1	1	0	PBCV-specific	basic	adaptor	domain
Wzz	PF02706.15	gi|429216856|ref|YP_007174846.1|	-	5.2	7.4	6.0	1.7	9.0	1.2	2.5	3	0	0	3	3	3	0	Chain	length	determinant	protein
Aconitase	PF00330.20	gi|429216857|ref|YP_007174847.1|	-	2.5e-176	587.2	0.0	3.3e-176	586.8	0.0	1.1	1	0	0	1	1	1	1	Aconitase	family	(aconitate	hydratase)
Aconitase_C	PF00694.19	gi|429216857|ref|YP_007174847.1|	-	3.5e-38	130.9	0.0	8.5e-38	129.7	0.0	1.7	1	0	0	1	1	1	1	Aconitase	C-terminal	domain
Rep_fac_C	PF08542.11	gi|429216858|ref|YP_007174848.1|	-	4.2e-24	84.8	0.5	1.9e-23	82.6	0.0	2.4	3	0	0	3	3	2	1	Replication	factor	C	C-terminal	domain
AAA	PF00004.29	gi|429216858|ref|YP_007174848.1|	-	6.5e-17	62.2	0.0	1.5e-16	61.0	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DNA_pol3_delta2	PF13177.6	gi|429216858|ref|YP_007174848.1|	-	8.2e-15	55.0	0.1	3.1e-11	43.3	0.1	2.2	1	1	1	2	2	2	2	DNA	polymerase	III,	delta	subunit
RuvB_N	PF05496.12	gi|429216858|ref|YP_007174848.1|	-	2.3e-07	30.7	0.0	6.2e-07	29.3	0.0	1.7	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_22	PF13401.6	gi|429216858|ref|YP_007174848.1|	-	1.6e-06	28.5	0.1	0.021	15.1	0.0	2.6	2	1	1	3	3	2	2	AAA	domain
Rad17	PF03215.15	gi|429216858|ref|YP_007174848.1|	-	1.9e-06	28.0	0.0	5.8e-06	26.4	0.0	1.9	1	1	0	1	1	1	1	Rad17	P-loop	domain
AAA_3	PF07726.11	gi|429216858|ref|YP_007174848.1|	-	1.9e-06	27.7	0.0	3.3e-06	27.0	0.0	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.6	gi|429216858|ref|YP_007174848.1|	-	3.6e-06	27.5	0.0	0.0063	16.9	0.0	2.3	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA_assoc_2	PF16193.5	gi|429216858|ref|YP_007174848.1|	-	1.6e-05	25.2	0.0	4.4e-05	23.7	0.0	1.9	1	0	0	1	1	1	1	AAA	C-terminal	domain
AAA_5	PF07728.14	gi|429216858|ref|YP_007174848.1|	-	2.4e-05	24.3	0.0	0.0001	22.3	0.0	2.0	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
DNA_pol3_delta	PF06144.13	gi|429216858|ref|YP_007174848.1|	-	2.9e-05	23.9	0.0	5.6e-05	23.0	0.0	1.4	1	0	0	1	1	1	1	DNA	polymerase	III,	delta	subunit
AAA_14	PF13173.6	gi|429216858|ref|YP_007174848.1|	-	9.2e-05	22.5	0.0	0.00017	21.6	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.6	gi|429216858|ref|YP_007174848.1|	-	0.00018	22.1	0.0	0.0017	18.9	0.0	2.3	1	1	1	2	2	2	1	AAA	domain
AAA_7	PF12775.7	gi|429216858|ref|YP_007174848.1|	-	0.00026	20.5	0.0	0.00044	19.8	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	dynein	motor	region
Mg_chelatase	PF01078.21	gi|429216858|ref|YP_007174848.1|	-	0.00034	20.1	0.0	0.0066	15.9	0.0	2.2	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
TniB	PF05621.11	gi|429216858|ref|YP_007174848.1|	-	0.0014	18.1	0.1	0.029	13.8	0.0	2.5	1	1	1	2	2	2	1	Bacterial	TniB	protein
PhoH	PF02562.16	gi|429216858|ref|YP_007174848.1|	-	0.0019	17.7	0.1	0.2	11.1	0.0	2.4	1	1	1	2	2	2	1	PhoH-like	protein
ResIII	PF04851.15	gi|429216858|ref|YP_007174848.1|	-	0.0032	17.5	0.0	0.021	14.8	0.0	2.0	1	1	1	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
FtsK_SpoIIIE	PF01580.18	gi|429216858|ref|YP_007174848.1|	-	0.0033	16.8	0.0	0.007	15.7	0.0	1.5	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
AAA_11	PF13086.6	gi|429216858|ref|YP_007174848.1|	-	0.0037	17.1	0.0	0.0072	16.2	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
TIP49	PF06068.13	gi|429216858|ref|YP_007174848.1|	-	0.004	16.4	0.0	0.0092	15.2	0.0	1.6	2	0	0	2	2	2	1	TIP49	P-loop	domain
DUF815	PF05673.13	gi|429216858|ref|YP_007174848.1|	-	0.0042	16.3	0.0	0.0064	15.7	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
IstB_IS21	PF01695.17	gi|429216858|ref|YP_007174848.1|	-	0.0044	16.8	0.0	0.011	15.4	0.0	1.7	1	1	0	1	1	1	1	IstB-like	ATP	binding	protein
RNA_helicase	PF00910.22	gi|429216858|ref|YP_007174848.1|	-	0.0069	16.8	0.0	0.014	15.8	0.0	1.7	1	1	0	1	1	1	1	RNA	helicase
AAA_33	PF13671.6	gi|429216858|ref|YP_007174848.1|	-	0.0078	16.4	0.1	0.016	15.3	0.1	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_28	PF13521.6	gi|429216858|ref|YP_007174848.1|	-	0.0081	16.4	0.0	0.014	15.7	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
NACHT	PF05729.12	gi|429216858|ref|YP_007174848.1|	-	0.009	15.9	0.0	0.024	14.6	0.0	1.7	1	1	0	1	1	1	1	NACHT	domain
T2SSE	PF00437.20	gi|429216858|ref|YP_007174848.1|	-	0.0094	15.0	0.0	0.03	13.4	0.0	1.7	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
Sigma54_activ_2	PF14532.6	gi|429216858|ref|YP_007174848.1|	-	0.014	15.5	0.0	0.046	13.8	0.0	1.9	1	1	0	1	1	1	0	Sigma-54	interaction	domain
AAA_2	PF07724.14	gi|429216858|ref|YP_007174848.1|	-	0.017	15.2	0.0	0.13	12.4	0.0	2.3	2	1	0	2	2	2	0	AAA	domain	(Cdc48	subfamily)
KTI12	PF08433.10	gi|429216858|ref|YP_007174848.1|	-	0.02	14.4	0.0	0.032	13.7	0.0	1.3	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
AAA_30	PF13604.6	gi|429216858|ref|YP_007174848.1|	-	0.022	14.5	0.1	0.097	12.4	0.1	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_25	PF13481.6	gi|429216858|ref|YP_007174848.1|	-	0.023	14.3	0.0	0.066	12.8	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
Sigma54_activat	PF00158.26	gi|429216858|ref|YP_007174848.1|	-	0.023	14.4	0.1	0.48	10.1	0.0	2.2	2	0	0	2	2	2	0	Sigma-54	interaction	domain
AAA_24	PF13479.6	gi|429216858|ref|YP_007174848.1|	-	0.026	14.3	0.0	0.052	13.3	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Viral_helicase1	PF01443.18	gi|429216858|ref|YP_007174848.1|	-	0.026	14.2	0.0	0.039	13.7	0.0	1.2	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
AAA_19	PF13245.6	gi|429216858|ref|YP_007174848.1|	-	0.028	14.8	0.1	0.077	13.3	0.1	1.8	1	1	0	1	1	1	0	AAA	domain
MIT	PF04212.18	gi|429216858|ref|YP_007174848.1|	-	0.049	13.7	0.2	0.22	11.6	0.1	2.2	2	0	0	2	2	1	0	MIT	(microtubule	interacting	and	transport)	domain
DUF2075	PF09848.9	gi|429216858|ref|YP_007174848.1|	-	0.073	12.3	0.1	1.1	8.4	0.1	2.1	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
NTPase_1	PF03266.15	gi|429216858|ref|YP_007174848.1|	-	0.09	12.7	0.0	0.64	9.9	0.0	2.2	1	1	1	2	2	2	0	NTPase
TPR_6	PF13174.6	gi|429216858|ref|YP_007174848.1|	-	0.11	13.2	0.1	33	5.4	0.0	3.6	3	0	0	3	3	3	0	Tetratricopeptide	repeat
Zeta_toxin	PF06414.12	gi|429216858|ref|YP_007174848.1|	-	0.16	11.3	0.0	0.35	10.1	0.0	1.6	1	0	0	1	1	1	0	Zeta	toxin
DEAD	PF00270.29	gi|429216858|ref|YP_007174848.1|	-	0.17	11.7	0.3	14	5.4	0.1	2.4	1	1	0	2	2	2	0	DEAD/DEAH	box	helicase
PAG	PF15347.6	gi|429216858|ref|YP_007174848.1|	-	0.22	10.5	0.0	6.4	5.7	0.0	2.0	1	1	1	2	2	2	0	Phosphoprotein	associated	with	glycosphingolipid-enriched
AAA	PF00004.29	gi|429216859|ref|YP_007174849.1|	-	2.1e-16	60.6	0.0	7.5e-16	58.8	0.0	2.0	2	0	0	2	2	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.12	gi|429216859|ref|YP_007174849.1|	-	1.2e-09	38.1	0.0	2.1e-09	37.3	0.0	1.3	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
DUF815	PF05673.13	gi|429216859|ref|YP_007174849.1|	-	1.1e-07	31.3	0.1	5.3e-07	29.0	0.0	2.0	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF815)
DNA_pol3_delta	PF06144.13	gi|429216859|ref|YP_007174849.1|	-	3.5e-07	30.2	0.1	1.1e-06	28.5	0.0	1.9	2	0	0	2	2	1	1	DNA	polymerase	III,	delta	subunit
AAA_2	PF07724.14	gi|429216859|ref|YP_007174849.1|	-	3.8e-06	27.1	0.2	7.5e-05	22.9	0.0	2.3	2	0	0	2	2	2	1	AAA	domain	(Cdc48	subfamily)
Rad17	PF03215.15	gi|429216859|ref|YP_007174849.1|	-	5.5e-06	26.4	0.1	1.4e-05	25.1	0.1	1.7	1	0	0	1	1	1	1	Rad17	P-loop	domain
Bac_DnaA	PF00308.18	gi|429216859|ref|YP_007174849.1|	-	9.5e-06	25.6	0.0	7.4e-05	22.7	0.0	2.3	1	1	0	1	1	1	1	Bacterial	dnaA	protein
AAA_5	PF07728.14	gi|429216859|ref|YP_007174849.1|	-	1.6e-05	24.9	0.0	3.8e-05	23.7	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.6	gi|429216859|ref|YP_007174849.1|	-	1.8e-05	25.2	0.0	3.5e-05	24.3	0.0	1.5	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.6	gi|429216859|ref|YP_007174849.1|	-	2e-05	24.9	0.0	0.0027	18.0	0.0	2.9	2	1	1	3	3	2	1	AAA	domain
AAA_14	PF13173.6	gi|429216859|ref|YP_007174849.1|	-	7e-05	22.9	0.0	0.00015	21.8	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.6	gi|429216859|ref|YP_007174849.1|	-	7.5e-05	23.3	1.2	0.00021	21.8	0.0	2.4	3	1	0	3	3	1	1	AAA	domain
AAA_assoc_2	PF16193.5	gi|429216859|ref|YP_007174849.1|	-	0.00023	21.4	0.1	0.0009	19.5	0.0	2.0	2	0	0	2	2	1	1	AAA	C-terminal	domain
Parvo_NS1	PF01057.17	gi|429216859|ref|YP_007174849.1|	-	0.00038	19.6	0.0	0.00094	18.4	0.0	1.6	2	0	0	2	2	2	1	Parvovirus	non-structural	protein	NS1
ABC_tran	PF00005.27	gi|429216859|ref|YP_007174849.1|	-	0.00078	20.0	0.1	0.0055	17.2	0.0	2.4	2	1	0	2	2	2	1	ABC	transporter
TIP49	PF06068.13	gi|429216859|ref|YP_007174849.1|	-	0.0011	18.2	0.1	0.0055	16.0	0.0	2.0	2	1	0	2	2	2	1	TIP49	P-loop	domain
ATPase_2	PF01637.18	gi|429216859|ref|YP_007174849.1|	-	0.0017	18.3	0.5	0.0047	16.9	0.0	1.9	2	0	0	2	2	2	1	ATPase	domain	predominantly	from	Archaea
IstB_IS21	PF01695.17	gi|429216859|ref|YP_007174849.1|	-	0.0024	17.6	0.0	0.0044	16.8	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_7	PF12775.7	gi|429216859|ref|YP_007174849.1|	-	0.0025	17.4	0.0	0.0042	16.6	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	dynein	motor	region
RsgA_GTPase	PF03193.16	gi|429216859|ref|YP_007174849.1|	-	0.003	17.5	0.0	0.013	15.4	0.0	1.9	2	0	0	2	2	2	1	RsgA	GTPase
NB-ARC	PF00931.22	gi|429216859|ref|YP_007174849.1|	-	0.0034	16.6	0.0	0.021	14.0	0.0	2.3	3	0	0	3	3	2	1	NB-ARC	domain
AAA_23	PF13476.6	gi|429216859|ref|YP_007174849.1|	-	0.0041	17.6	1.3	0.66	10.4	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
AAA_17	PF13207.6	gi|429216859|ref|YP_007174849.1|	-	0.0056	17.1	0.2	0.016	15.6	0.0	1.9	2	0	0	2	2	1	1	AAA	domain
Zeta_toxin	PF06414.12	gi|429216859|ref|YP_007174849.1|	-	0.0059	15.9	0.0	0.016	14.5	0.0	1.7	2	0	0	2	2	2	1	Zeta	toxin
AAA_25	PF13481.6	gi|429216859|ref|YP_007174849.1|	-	0.0076	15.8	0.0	0.02	14.5	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
NACHT	PF05729.12	gi|429216859|ref|YP_007174849.1|	-	0.0096	15.8	0.0	0.32	10.9	0.0	2.8	1	1	1	3	3	3	1	NACHT	domain
AAA_24	PF13479.6	gi|429216859|ref|YP_007174849.1|	-	0.017	14.8	0.0	0.038	13.7	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_11	PF13086.6	gi|429216859|ref|YP_007174849.1|	-	0.021	14.6	3.1	0.49	10.1	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
AAA_PrkA	PF08298.11	gi|429216859|ref|YP_007174849.1|	-	0.023	13.6	0.1	0.068	12.1	0.0	1.8	2	0	0	2	2	2	0	PrkA	AAA	domain
TniB	PF05621.11	gi|429216859|ref|YP_007174849.1|	-	0.028	13.8	0.0	0.062	12.7	0.0	1.6	1	0	0	1	1	1	0	Bacterial	TniB	protein
Phage_TAC_7	PF10109.9	gi|429216859|ref|YP_007174849.1|	-	0.03	14.4	0.1	5.7	7.1	0.0	2.7	2	0	0	2	2	2	0	Phage	tail	assembly	chaperone	proteins,	E,	or	41	or	14
RNA_helicase	PF00910.22	gi|429216859|ref|YP_007174849.1|	-	0.032	14.6	0.0	0.11	12.9	0.0	2.0	1	0	0	1	1	1	0	RNA	helicase
AAA_33	PF13671.6	gi|429216859|ref|YP_007174849.1|	-	0.037	14.2	0.0	0.097	12.8	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
TsaE	PF02367.17	gi|429216859|ref|YP_007174849.1|	-	0.057	13.4	0.0	0.1	12.6	0.0	1.4	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
MMR_HSR1	PF01926.23	gi|429216859|ref|YP_007174849.1|	-	0.06	13.4	0.0	0.28	11.3	0.0	2.2	2	0	0	2	2	2	0	50S	ribosome-binding	GTPase
AAA_3	PF07726.11	gi|429216859|ref|YP_007174849.1|	-	0.079	12.8	0.0	0.2	11.5	0.0	1.7	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_19	PF13245.6	gi|429216859|ref|YP_007174849.1|	-	0.12	12.7	0.0	0.54	10.6	0.0	2.0	1	1	1	2	2	2	0	AAA	domain
AAA_29	PF13555.6	gi|429216859|ref|YP_007174849.1|	-	0.12	12.1	0.0	0.25	11.1	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_28	PF13521.6	gi|429216859|ref|YP_007174849.1|	-	0.14	12.4	0.0	0.25	11.5	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AA_permease_2	PF13520.6	gi|429216860|ref|YP_007174850.1|	-	3.4e-41	141.5	58.9	3.4e-41	141.5	58.9	2.1	1	1	1	2	2	2	1	Amino	acid	permease
AA_permease	PF00324.21	gi|429216860|ref|YP_007174850.1|	-	4.4e-29	101.4	62.3	4.4e-29	101.4	62.3	2.6	1	1	2	3	3	3	1	Amino	acid	permease
He_PIG_assoc	PF10632.9	gi|429216860|ref|YP_007174850.1|	-	0.12	12.0	0.3	0.33	10.7	0.3	1.7	1	0	0	1	1	1	0	He_PIG	associated,	NEW1	domain	of	bacterial	glycohydrolase
Phospholamban	PF04272.14	gi|429216861|ref|YP_007174851.1|	-	0.015	14.7	0.9	0.015	14.7	0.9	1.1	1	0	0	1	1	1	0	Phospholamban
COX7C	PF02935.16	gi|429216861|ref|YP_007174851.1|	-	0.015	15.5	0.8	0.016	15.4	0.8	1.0	1	0	0	1	1	1	0	Cytochrome	c	oxidase	subunit	VIIc
Sigma_reg_N	PF13800.6	gi|429216861|ref|YP_007174851.1|	-	0.026	14.8	4.5	0.027	14.7	4.5	1.0	1	0	0	1	1	1	0	Sigma	factor	regulator	N-terminal
DUF3671	PF12420.8	gi|429216861|ref|YP_007174851.1|	-	0.045	13.8	2.0	0.043	13.9	2.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function
Tetraspanin	PF00335.20	gi|429216861|ref|YP_007174851.1|	-	0.15	11.8	0.8	0.15	11.7	0.8	1.0	1	0	0	1	1	1	0	Tetraspanin	family
Prominin	PF05478.11	gi|429216861|ref|YP_007174851.1|	-	0.18	9.7	0.8	0.17	9.8	0.8	1.0	1	0	0	1	1	1	0	Prominin
DUF4834	PF16118.5	gi|429216861|ref|YP_007174851.1|	-	1.8	9.6	3.2	1.8	9.6	3.2	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4834)
Archease	PF01951.16	gi|429216862|ref|YP_007174852.1|	-	8.7e-42	142.6	1.2	9.7e-42	142.5	1.2	1.0	1	0	0	1	1	1	1	Archease	protein	family	(MTH1598/TM1083)
DUF5413	PF17434.2	gi|429216864|ref|YP_007174854.1|	-	0.077	13.3	6.8	0.036	14.4	3.2	2.3	1	1	0	1	1	1	0	Family	of	unknown	function	(DUF5413)
CPP1-like	PF11833.8	gi|429216864|ref|YP_007174854.1|	-	4.1	7.0	6.4	0.34	10.5	0.5	2.2	2	1	1	3	3	3	0	Protein	CHAPERONE-LIKE	PROTEIN	OF	POR1-like
NAD_binding_8	PF13450.6	gi|429216865|ref|YP_007174855.1|	-	5.4e-09	36.2	0.1	3.4e-08	33.6	0.1	2.1	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_2	PF07992.14	gi|429216865|ref|YP_007174855.1|	-	4.1e-07	29.5	0.1	6.4e-07	28.9	0.1	1.4	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.14	gi|429216865|ref|YP_007174855.1|	-	6.7e-06	25.1	1.0	5e-05	22.2	0.4	2.4	3	0	0	3	3	3	1	HI0933-like	protein
GIDA	PF01134.22	gi|429216865|ref|YP_007174855.1|	-	8.7e-06	25.1	0.1	1.7e-05	24.1	0.1	1.5	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
DAO	PF01266.24	gi|429216865|ref|YP_007174855.1|	-	0.00015	21.4	0.1	0.00044	19.9	0.1	1.7	1	1	0	2	2	2	1	FAD	dependent	oxidoreductase
FAD_binding_3	PF01494.19	gi|429216865|ref|YP_007174855.1|	-	0.00054	19.3	0.0	0.0016	17.7	0.0	1.7	2	0	0	2	2	2	1	FAD	binding	domain
Lycopene_cycl	PF05834.12	gi|429216865|ref|YP_007174855.1|	-	0.00058	19.0	0.1	0.84	8.6	0.0	2.1	2	0	0	2	2	2	2	Lycopene	cyclase	protein
Trp_halogenase	PF04820.14	gi|429216865|ref|YP_007174855.1|	-	0.00095	18.1	0.0	0.91	8.3	0.0	2.1	2	0	0	2	2	2	2	Tryptophan	halogenase
Thi4	PF01946.17	gi|429216865|ref|YP_007174855.1|	-	0.0011	18.3	0.0	0.0023	17.2	0.0	1.6	1	0	0	1	1	1	1	Thi4	family
FAD_binding_2	PF00890.24	gi|429216865|ref|YP_007174855.1|	-	0.0032	16.6	0.2	0.0046	16.1	0.2	1.2	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox	PF00070.27	gi|429216865|ref|YP_007174855.1|	-	0.0044	17.5	0.8	0.027	15.0	0.0	2.8	3	2	1	4	4	4	1	Pyridine	nucleotide-disulphide	oxidoreductase
TcpF	PF06340.11	gi|429216865|ref|YP_007174855.1|	-	0.0053	15.7	0.1	0.0095	14.8	0.1	1.3	1	0	0	1	1	1	1	Vibrio	cholerae	toxin	co-regulated	pilus	biosynthesis	protein	F
Pyr_redox_3	PF13738.6	gi|429216865|ref|YP_007174855.1|	-	0.0055	16.0	0.2	0.014	14.7	0.2	1.7	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
3HCDH_N	PF02737.18	gi|429216865|ref|YP_007174855.1|	-	0.016	15.1	0.0	0.033	14.1	0.0	1.5	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
FAD_oxidored	PF12831.7	gi|429216865|ref|YP_007174855.1|	-	0.027	13.8	0.1	0.043	13.2	0.1	1.3	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
PurS	PF02700.14	gi|429216865|ref|YP_007174855.1|	-	0.067	13.4	0.2	0.47	10.7	0.1	2.4	2	0	0	2	2	2	0	Phosphoribosylformylglycinamidine	(FGAM)	synthase
AlaDh_PNT_C	PF01262.21	gi|429216865|ref|YP_007174855.1|	-	0.068	12.5	1.1	0.55	9.5	0.0	2.6	4	0	0	4	4	4	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
Amino_oxidase	PF01593.24	gi|429216865|ref|YP_007174855.1|	-	0.094	12.0	0.0	0.21	10.8	0.0	1.6	2	0	0	2	2	2	0	Flavin	containing	amine	oxidoreductase
AsnC_trans_reg	PF01037.21	gi|429216866|ref|YP_007174856.1|	-	1.4e-12	47.4	0.1	2e-12	46.9	0.1	1.2	1	0	0	1	1	1	1	Lrp/AsnC	ligand	binding	domain
HTH_AsnC-type	PF13404.6	gi|429216866|ref|YP_007174856.1|	-	2.2e-11	43.4	0.1	3.3e-11	42.8	0.1	1.3	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_24	PF13412.6	gi|429216866|ref|YP_007174856.1|	-	2.5e-10	39.7	2.6	4.8e-10	38.8	2.6	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.12	gi|429216866|ref|YP_007174856.1|	-	9.8e-05	22.2	0.2	0.00026	20.9	0.2	1.7	1	0	0	1	1	1	1	HTH	domain
NapD	PF03927.13	gi|429216866|ref|YP_007174856.1|	-	0.0021	18.1	0.3	0.0039	17.2	0.3	1.4	1	0	0	1	1	1	1	NapD	protein
HTH_36	PF13730.6	gi|429216866|ref|YP_007174856.1|	-	0.0022	17.9	1.7	0.45	10.5	0.2	3.3	3	0	0	3	3	3	1	Helix-turn-helix	domain
HTH_28	PF13518.6	gi|429216866|ref|YP_007174856.1|	-	0.0031	17.6	0.0	0.0077	16.3	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.6	gi|429216866|ref|YP_007174856.1|	-	0.0075	16.0	0.0	0.014	15.1	0.0	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_5	PF01022.20	gi|429216866|ref|YP_007174856.1|	-	0.0089	15.9	0.1	0.023	14.5	0.0	1.7	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HxlR	PF01638.17	gi|429216866|ref|YP_007174856.1|	-	0.012	15.5	0.1	0.024	14.5	0.1	1.4	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
MarR	PF01047.22	gi|429216866|ref|YP_007174856.1|	-	0.018	15.0	0.1	0.04	13.9	0.1	1.5	1	0	0	1	1	1	0	MarR	family
Mga	PF05043.13	gi|429216866|ref|YP_007174856.1|	-	0.019	15.6	0.3	0.057	14.0	0.1	1.9	2	0	0	2	2	2	0	Mga	helix-turn-helix	domain
HTH_20	PF12840.7	gi|429216866|ref|YP_007174856.1|	-	0.039	14.0	0.0	0.09	12.8	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_22	PF13309.6	gi|429216866|ref|YP_007174856.1|	-	0.052	13.6	0.0	0.23	11.6	0.0	2.2	2	1	0	2	2	2	0	HTH	domain
PadR	PF03551.14	gi|429216866|ref|YP_007174856.1|	-	0.083	12.9	0.0	0.19	11.7	0.0	1.7	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
Peptidase_M54	PF07998.11	gi|429216867|ref|YP_007174857.1|	-	1.3e-26	93.8	2.4	1.6e-26	93.5	2.4	1.1	1	0	0	1	1	1	1	Peptidase	family	M54
Peptidase_M10	PF00413.24	gi|429216867|ref|YP_007174857.1|	-	0.00096	19.0	0.0	0.0011	18.9	0.0	1.3	1	0	0	1	1	1	1	Matrixin
Reprolysin_4	PF13583.6	gi|429216867|ref|YP_007174857.1|	-	0.0073	16.0	0.0	0.0095	15.6	0.0	1.2	1	0	0	1	1	1	1	Metallo-peptidase	family	M12B	Reprolysin-like
Reprolysin_3	PF13582.6	gi|429216867|ref|YP_007174857.1|	-	0.0074	16.8	0.1	0.011	16.2	0.1	1.4	1	1	0	1	1	1	1	Metallo-peptidase	family	M12B	Reprolysin-like
Reprolysin_2	PF13574.6	gi|429216867|ref|YP_007174857.1|	-	0.038	13.9	0.0	0.045	13.6	0.0	1.2	1	0	0	1	1	1	0	Metallo-peptidase	family	M12B	Reprolysin-like
Metallopep	PF12044.8	gi|429216867|ref|YP_007174857.1|	-	0.043	12.4	0.1	0.062	11.9	0.1	1.1	1	0	0	1	1	1	0	Putative	peptidase	family
Reprolysin_5	PF13688.6	gi|429216867|ref|YP_007174857.1|	-	0.044	13.9	0.3	0.11	12.7	0.1	1.6	1	1	1	2	2	2	0	Metallo-peptidase	family	M12
Peptidase_M43	PF05572.13	gi|429216867|ref|YP_007174857.1|	-	0.055	13.4	1.5	0.066	13.1	0.4	1.6	1	1	0	2	2	2	0	Pregnancy-associated	plasma	protein-A
HhH-GPD	PF00730.25	gi|429216868|ref|YP_007174858.1|	-	1.7e-21	76.7	0.0	2.5e-21	76.2	0.0	1.2	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
EndIII_4Fe-2S	PF10576.9	gi|429216868|ref|YP_007174858.1|	-	0.00085	19.6	4.8	0.0014	18.9	4.8	1.3	1	0	0	1	1	1	1	Iron-sulfur	binding	domain	of	endonuclease	III
HHH	PF00633.23	gi|429216868|ref|YP_007174858.1|	-	0.0053	16.6	0.0	0.013	15.4	0.0	1.6	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_5	PF14520.6	gi|429216868|ref|YP_007174858.1|	-	0.022	15.4	0.4	0.96	10.1	0.0	2.8	3	0	0	3	3	3	0	Helix-hairpin-helix	domain
DUF2400	PF09674.10	gi|429216868|ref|YP_007174858.1|	-	0.1	12.6	0.0	0.58	10.1	0.0	2.1	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2400)
ECH_1	PF00378.20	gi|429216869|ref|YP_007174859.1|	-	0.18	11.1	0.0	0.28	10.5	0.0	1.2	1	0	0	1	1	1	0	Enoyl-CoA	hydratase/isomerase
Cdc6_C	PF09079.11	gi|429216870|ref|YP_007174860.1|	-	6.9e-14	51.6	0.0	1.9e-13	50.2	0.0	1.8	1	0	0	1	1	1	1	CDC6,	C	terminal	winged	helix	domain
AAA_22	PF13401.6	gi|429216870|ref|YP_007174860.1|	-	4.1e-08	33.6	0.0	9.1e-08	32.5	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
TniB	PF05621.11	gi|429216870|ref|YP_007174860.1|	-	3.1e-05	23.5	0.1	0.00011	21.7	0.0	1.9	2	1	0	2	2	2	1	Bacterial	TniB	protein
Mg_chelatase_C	PF13335.6	gi|429216870|ref|YP_007174860.1|	-	0.0021	18.7	0.1	0.004	17.8	0.1	1.4	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI	C-terminal
AAA_16	PF13191.6	gi|429216870|ref|YP_007174860.1|	-	0.0093	16.4	0.1	0.056	13.8	0.1	2.3	1	1	0	1	1	1	1	AAA	ATPase	domain
NB-ARC	PF00931.22	gi|429216870|ref|YP_007174860.1|	-	0.0096	15.1	0.2	0.033	13.4	0.0	1.8	2	0	0	2	2	2	1	NB-ARC	domain
AAA_35	PF14516.6	gi|429216870|ref|YP_007174860.1|	-	0.013	14.3	0.1	0.022	13.6	0.1	1.4	1	0	0	1	1	1	0	AAA-like	domain
AAA	PF00004.29	gi|429216870|ref|YP_007174860.1|	-	0.018	15.5	0.0	0.05	14.0	0.0	1.7	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Stn1_C	PF12659.7	gi|429216870|ref|YP_007174860.1|	-	0.11	12.5	0.1	5.9	6.9	0.0	3.0	3	0	0	3	3	3	0	Telomere	capping	C-terminal	wHTH
Phage-MuB_C	PF09077.11	gi|429216870|ref|YP_007174860.1|	-	0.13	12.2	0.2	0.4	10.6	0.2	1.9	1	1	0	1	1	1	0	Mu	B	transposition	protein,	C	terminal
AAA_18	PF13238.6	gi|429216870|ref|YP_007174860.1|	-	0.14	12.8	0.0	0.54	10.8	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
F-box	PF00646.33	gi|429216870|ref|YP_007174860.1|	-	0.31	11.0	2.3	0.79	9.7	0.0	2.6	3	0	0	3	3	3	0	F-box	domain
NTPase_1	PF03266.15	gi|429216870|ref|YP_007174860.1|	-	2.3	8.1	4.1	0.99	9.3	0.1	2.4	4	0	0	4	4	4	0	NTPase
TBPIP	PF07106.13	gi|429216871|ref|YP_007174861.1|	-	6.3e-05	22.8	0.3	0.00018	21.4	0.1	1.8	1	1	1	2	2	2	1	TBPIP/Hop2	winged	helix	domain
HTH_24	PF13412.6	gi|429216871|ref|YP_007174861.1|	-	0.00021	20.8	0.7	0.00053	19.5	0.7	1.7	1	1	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.12	gi|429216871|ref|YP_007174861.1|	-	0.00037	20.4	0.2	0.00059	19.7	0.2	1.4	1	0	0	1	1	1	1	HTH	domain
TrmB	PF01978.19	gi|429216871|ref|YP_007174861.1|	-	0.00098	19.0	0.2	0.0014	18.4	0.2	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
Rrf2	PF02082.20	gi|429216871|ref|YP_007174861.1|	-	0.0036	17.6	0.1	0.0051	17.1	0.1	1.2	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_CodY	PF08222.11	gi|429216871|ref|YP_007174861.1|	-	0.006	16.1	0.0	0.008	15.7	0.0	1.3	1	0	0	1	1	1	1	CodY	helix-turn-helix	domain
HTH_20	PF12840.7	gi|429216871|ref|YP_007174861.1|	-	0.0099	15.9	0.0	0.012	15.6	0.0	1.1	1	0	0	1	1	1	1	Helix-turn-helix	domain
TFIIE_alpha	PF02002.17	gi|429216871|ref|YP_007174861.1|	-	0.017	14.9	0.7	0.023	14.5	0.7	1.2	1	0	0	1	1	1	0	TFIIE	alpha	subunit
HTH_Crp_2	PF13545.6	gi|429216871|ref|YP_007174861.1|	-	0.02	14.8	0.2	0.045	13.7	0.2	1.6	1	1	0	1	1	1	0	Crp-like	helix-turn-helix	domain
DUF1441	PF07278.11	gi|429216871|ref|YP_007174861.1|	-	0.02	14.8	0.0	0.024	14.5	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1441)
HTH_26	PF13443.6	gi|429216871|ref|YP_007174861.1|	-	0.029	14.8	0.2	0.059	13.8	0.1	1.6	2	0	0	2	2	2	0	Cro/C1-type	HTH	DNA-binding	domain
MarR_2	PF12802.7	gi|429216871|ref|YP_007174861.1|	-	0.07	13.0	0.0	0.1	12.5	0.0	1.1	1	0	0	1	1	1	0	MarR	family
HTH_AsnC-type	PF13404.6	gi|429216871|ref|YP_007174861.1|	-	0.099	12.5	0.0	0.2	11.5	0.0	1.5	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
HTH_5	PF01022.20	gi|429216871|ref|YP_007174861.1|	-	0.1	12.5	0.4	0.28	11.1	0.4	1.8	1	1	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
HTH_27	PF13463.6	gi|429216871|ref|YP_007174861.1|	-	0.1	13.1	0.3	0.14	12.7	0.3	1.2	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
MoaC	PF01967.21	gi|429216872|ref|YP_007174862.1|	-	2.1e-44	150.9	4.7	2.3e-44	150.8	4.7	1.0	1	0	0	1	1	1	1	MoaC	family
Sld5	PF05916.11	gi|429216873|ref|YP_007174863.1|	-	0.00014	22.3	1.2	0.00026	21.4	1.2	1.5	1	1	0	1	1	1	1	GINS	complex	protein
MCM	PF00493.23	gi|429216874|ref|YP_007174864.1|	-	8.7e-95	316.1	0.0	1.4e-94	315.4	0.0	1.3	1	0	0	1	1	1	1	MCM	P-loop	domain
MCM_OB	PF17207.3	gi|429216874|ref|YP_007174864.1|	-	2.9e-35	120.9	0.0	5e-35	120.1	0.0	1.3	1	0	0	1	1	1	1	MCM	OB	domain
MCM_lid	PF17855.1	gi|429216874|ref|YP_007174864.1|	-	7.3e-28	96.8	0.2	2.1e-27	95.3	0.2	1.8	1	0	0	1	1	1	1	MCM	AAA-lid	domain
MCM_N	PF14551.6	gi|429216874|ref|YP_007174864.1|	-	2.1e-21	76.4	0.4	2.1e-21	76.4	0.4	2.5	4	0	0	4	4	4	1	MCM	N-terminal	domain
AAA_5	PF07728.14	gi|429216874|ref|YP_007174864.1|	-	3.8e-06	27.0	0.0	8.6e-06	25.8	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
Mg_chelatase	PF01078.21	gi|429216874|ref|YP_007174864.1|	-	1.8e-05	24.2	0.0	0.0029	17.0	0.0	2.4	1	1	1	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_3	PF07726.11	gi|429216874|ref|YP_007174864.1|	-	1.9e-05	24.5	0.0	4.3e-05	23.4	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.6	gi|429216874|ref|YP_007174864.1|	-	0.038	14.4	0.3	0.12	12.7	0.1	1.9	2	0	0	2	2	2	0	AAA	ATPase	domain
HEPN_AbiV	PF18728.1	gi|429216874|ref|YP_007174864.1|	-	0.058	13.5	0.0	0.14	12.3	0.0	1.6	1	0	0	1	1	1	0	AbiV
AAA_7	PF12775.7	gi|429216874|ref|YP_007174864.1|	-	0.15	11.5	0.0	0.55	9.7	0.0	1.9	2	0	0	2	2	2	0	P-loop	containing	dynein	motor	region
DEAD	PF00270.29	gi|429216875|ref|YP_007174865.1|	-	5.1e-25	88.2	0.0	3e-24	85.7	0.0	2.1	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
ResIII	PF04851.15	gi|429216875|ref|YP_007174865.1|	-	8.8e-15	55.1	0.0	2e-14	54.0	0.0	1.6	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.31	gi|429216875|ref|YP_007174865.1|	-	1e-11	45.2	0.5	2.1e-09	37.7	0.2	3.1	2	1	0	2	2	2	1	Helicase	conserved	C-terminal	domain
HHH_5	PF14520.6	gi|429216875|ref|YP_007174865.1|	-	1.3e-11	45.0	0.3	1.1e-09	38.7	0.0	3.8	4	1	1	5	5	4	1	Helix-hairpin-helix	domain
HHH_2	PF12826.7	gi|429216875|ref|YP_007174865.1|	-	4.2e-09	36.4	0.0	5.5e-07	29.6	0.0	3.8	3	1	1	4	4	4	1	Helix-hairpin-helix	motif
HHH	PF00633.23	gi|429216875|ref|YP_007174865.1|	-	2.1e-06	27.3	0.0	0.0031	17.3	0.0	2.8	2	0	0	2	2	2	2	Helix-hairpin-helix	motif
DNA_pol_lambd_f	PF10391.9	gi|429216875|ref|YP_007174865.1|	-	4.1e-05	23.3	0.0	0.0016	18.2	0.0	3.1	2	1	1	3	3	3	1	Fingers	domain	of	DNA	polymerase	lambda
T2SSE	PF00437.20	gi|429216875|ref|YP_007174865.1|	-	0.0015	17.6	0.0	0.0028	16.7	0.0	1.4	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
ATPase_2	PF01637.18	gi|429216875|ref|YP_007174865.1|	-	0.0016	18.4	0.1	0.0016	18.4	0.1	2.6	3	0	0	3	3	3	1	ATPase	domain	predominantly	from	Archaea
Cdd1	PF11731.8	gi|429216875|ref|YP_007174865.1|	-	0.0024	18.1	0.0	0.0053	17.0	0.0	1.6	1	0	0	1	1	1	1	Pathogenicity	locus
SNF2_N	PF00176.23	gi|429216875|ref|YP_007174865.1|	-	0.08	11.6	0.0	0.16	10.7	0.0	1.5	1	0	0	1	1	1	0	SNF2	family	N-terminal	domain
HHH_8	PF14716.6	gi|429216875|ref|YP_007174865.1|	-	0.11	12.9	0.0	0.47	10.9	0.0	2.2	1	1	0	1	1	1	0	Helix-hairpin-helix	domain
Ipi1_N	PF12333.8	gi|429216875|ref|YP_007174865.1|	-	0.14	12.7	0.0	0.33	11.6	0.0	1.7	1	0	0	1	1	1	0	Rix1	complex	component	involved	in	60S	ribosome	maturation
Sacchrp_dh_C	PF16653.5	gi|429216876|ref|YP_007174866.1|	-	2.6e-23	83.5	0.0	3.2e-23	83.2	0.0	1.1	1	0	0	1	1	1	1	Saccharopine	dehydrogenase	C-terminal	domain
Semialdhyde_dh	PF01118.24	gi|429216876|ref|YP_007174866.1|	-	6.4e-07	29.8	0.1	1.6e-06	28.5	0.0	1.7	2	0	0	2	2	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Sacchrp_dh_NADP	PF03435.18	gi|429216876|ref|YP_007174866.1|	-	2.2e-06	27.9	0.0	3.5e-06	27.3	0.0	1.3	1	0	0	1	1	1	1	Saccharopine	dehydrogenase	NADP	binding	domain
3HCDH_N	PF02737.18	gi|429216876|ref|YP_007174866.1|	-	8.8e-06	25.7	0.0	1.4e-05	25.1	0.0	1.3	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_2	PF03446.15	gi|429216876|ref|YP_007174866.1|	-	4.4e-05	23.7	0.0	8e-05	22.9	0.0	1.4	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
2-Hacid_dh_C	PF02826.19	gi|429216876|ref|YP_007174866.1|	-	0.00014	21.2	0.0	0.00026	20.4	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
GFO_IDH_MocA	PF01408.22	gi|429216876|ref|YP_007174866.1|	-	0.00021	22.1	0.0	0.00053	20.8	0.0	1.7	2	0	0	2	2	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
TrkA_N	PF02254.18	gi|429216876|ref|YP_007174866.1|	-	0.00034	20.9	0.1	0.0016	18.7	0.0	2.0	2	0	0	2	2	2	1	TrkA-N	domain
AlaDh_PNT_C	PF01262.21	gi|429216876|ref|YP_007174866.1|	-	0.00049	19.5	0.0	0.00092	18.6	0.0	1.5	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
UDPG_MGDP_dh_N	PF03721.14	gi|429216876|ref|YP_007174866.1|	-	0.0023	17.6	0.5	0.0059	16.2	0.0	1.9	3	0	0	3	3	3	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
F420_oxidored	PF03807.17	gi|429216876|ref|YP_007174866.1|	-	0.0029	18.1	0.0	0.0081	16.7	0.0	1.8	1	1	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
ApbA	PF02558.16	gi|429216876|ref|YP_007174866.1|	-	0.003	17.2	0.0	0.0055	16.4	0.0	1.4	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
Shikimate_DH	PF01488.20	gi|429216876|ref|YP_007174866.1|	-	0.006	16.6	0.0	0.01	15.9	0.0	1.4	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
NAD_Gly3P_dh_N	PF01210.23	gi|429216876|ref|YP_007174866.1|	-	0.0089	16.0	0.0	0.019	15.0	0.0	1.6	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Ldh_1_N	PF00056.23	gi|429216876|ref|YP_007174866.1|	-	0.016	15.3	0.0	0.03	14.4	0.0	1.4	1	0	0	1	1	1	0	lactate/malate	dehydrogenase,	NAD	binding	domain
Pyr_redox	PF00070.27	gi|429216876|ref|YP_007174866.1|	-	0.025	15.1	0.0	0.48	11.0	0.0	2.8	3	0	0	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
IlvN	PF07991.12	gi|429216876|ref|YP_007174866.1|	-	0.027	14.0	0.0	0.046	13.3	0.0	1.4	1	0	0	1	1	1	0	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
NAD_binding_8	PF13450.6	gi|429216876|ref|YP_007174866.1|	-	0.12	12.6	0.0	0.35	11.1	0.0	1.8	2	0	0	2	2	1	0	NAD(P)-binding	Rossmann-like	domain
NAD_binding_10	PF13460.6	gi|429216876|ref|YP_007174866.1|	-	0.12	12.2	0.0	0.21	11.5	0.0	1.4	1	0	0	1	1	1	0	NAD(P)H-binding
JCAD	PF15351.6	gi|429216876|ref|YP_007174866.1|	-	0.14	9.9	0.1	0.19	9.5	0.1	1.0	1	0	0	1	1	1	0	Junctional	protein	associated	with	coronary	artery	disease
adh_short	PF00106.25	gi|429216876|ref|YP_007174866.1|	-	0.14	11.6	0.0	0.27	10.7	0.0	1.4	1	0	0	1	1	1	0	short	chain	dehydrogenase
NAD_binding_7	PF13241.6	gi|429216876|ref|YP_007174866.1|	-	0.14	12.6	0.0	0.27	11.7	0.0	1.5	1	0	0	1	1	1	0	Putative	NAD(P)-binding
RtcB	PF01139.17	gi|429216877|ref|YP_007174867.1|	-	3.3e-164	547.0	0.0	3.8e-164	546.8	0.0	1.0	1	0	0	1	1	1	1	tRNA-splicing	ligase	RtcB
DUF2120	PF09893.9	gi|429216877|ref|YP_007174867.1|	-	0.011	15.8	0.0	0.036	14.2	0.0	1.8	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2120)
DUF4761	PF15958.5	gi|429216877|ref|YP_007174867.1|	-	0.041	14.0	0.0	0.1	12.8	0.0	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4761)
Myb_DNA-bind_4	PF13837.6	gi|429216877|ref|YP_007174867.1|	-	0.068	13.5	0.0	0.16	12.4	0.0	1.5	1	0	0	1	1	1	0	Myb/SANT-like	DNA-binding	domain
Phage_holin_6_1	PF09682.10	gi|429216877|ref|YP_007174867.1|	-	0.092	13.2	0.2	1.1	9.7	0.1	2.5	2	0	0	2	2	2	0	Bacteriophage	holin	of	superfamily	6	(Holin_LLH)
Ribosomal_L3	PF00297.22	gi|429216878|ref|YP_007174868.1|	-	6.5e-72	242.5	0.1	1.1e-71	241.7	0.1	1.4	1	1	0	1	1	1	1	Ribosomal	protein	L3
Trigger_N	PF05697.13	gi|429216878|ref|YP_007174868.1|	-	0.085	13.2	0.2	0.16	12.3	0.2	1.4	1	0	0	1	1	1	0	Bacterial	trigger	factor	protein	(TF)
DUF5094	PF17015.5	gi|429216878|ref|YP_007174868.1|	-	0.18	11.9	0.0	0.28	11.3	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5094)
Ribosomal_L4	PF00573.22	gi|429216879|ref|YP_007174869.1|	-	2.7e-41	141.4	0.1	3.2e-41	141.2	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L4/L1	family
Ribosomal_L23	PF00276.20	gi|429216880|ref|YP_007174870.1|	-	6e-19	68.2	5.5	2.6e-18	66.2	5.5	1.7	1	1	0	1	1	1	1	Ribosomal	protein	L23
ASL_C	PF08328.11	gi|429216880|ref|YP_007174870.1|	-	0.018	15.1	0.3	0.02	15.0	0.3	1.1	1	0	0	1	1	1	0	Adenylosuccinate	lyase	C-terminal
PBECR1	PF18809.1	gi|429216880|ref|YP_007174870.1|	-	0.022	15.4	0.4	0.024	15.3	0.4	1.2	1	0	0	1	1	1	0	phage-Barnase-EndoU-ColicinE5/D-RelE	like	nuclease1
ParA	PF10609.9	gi|429216881|ref|YP_007174871.1|	-	1.6e-86	289.8	0.0	2e-86	289.4	0.0	1.1	1	0	0	1	1	1	1	NUBPL	iron-transfer	P-loop	NTPase
CbiA	PF01656.23	gi|429216881|ref|YP_007174871.1|	-	4.2e-13	49.5	0.1	6.6e-12	45.6	0.1	2.9	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.6	gi|429216881|ref|YP_007174871.1|	-	4e-07	30.1	0.3	2.4e-06	27.6	0.1	2.1	2	0	0	2	2	2	1	AAA	domain
Fer4_NifH	PF00142.18	gi|429216881|ref|YP_007174871.1|	-	2.2e-06	27.3	0.9	0.00081	18.9	0.1	2.7	2	1	0	2	2	2	2	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
ArsA_ATPase	PF02374.15	gi|429216881|ref|YP_007174871.1|	-	1.6e-05	24.3	0.3	0.00076	18.8	0.1	2.5	2	0	0	2	2	2	1	Anion-transporting	ATPase
MipZ	PF09140.11	gi|429216881|ref|YP_007174871.1|	-	0.00049	19.5	0.0	0.00088	18.6	0.0	1.4	1	0	0	1	1	1	1	ATPase	MipZ
AAA_30	PF13604.6	gi|429216881|ref|YP_007174871.1|	-	0.0057	16.4	0.0	0.014	15.1	0.0	1.6	2	0	0	2	2	2	1	AAA	domain
InvH	PF04741.12	gi|429216881|ref|YP_007174871.1|	-	0.007	16.3	1.3	0.71	9.8	0.0	2.2	2	0	0	2	2	2	1	InvH	outer	membrane	lipoprotein
CBP_BcsQ	PF06564.12	gi|429216881|ref|YP_007174871.1|	-	0.008	15.7	0.0	0.028	13.9	0.0	1.8	2	0	0	2	2	2	1	Cellulose	biosynthesis	protein	BcsQ
AAA_25	PF13481.6	gi|429216881|ref|YP_007174871.1|	-	0.011	15.3	0.0	0.023	14.2	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_26	PF13500.6	gi|429216881|ref|YP_007174871.1|	-	0.024	14.5	0.4	1.8	8.3	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
MeaB	PF03308.16	gi|429216881|ref|YP_007174871.1|	-	0.089	11.8	0.2	0.17	10.9	0.1	1.4	1	1	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
PhoH	PF02562.16	gi|429216881|ref|YP_007174871.1|	-	0.1	12.0	0.0	0.16	11.4	0.0	1.3	1	0	0	1	1	1	0	PhoH-like	protein
RNA_pol_Rbc25	PF08292.12	gi|429216881|ref|YP_007174871.1|	-	0.18	12.0	1.4	0.49	10.6	0.5	2.0	2	0	0	2	2	2	0	RNA	polymerase	III	subunit	Rpc25
AhpC-TSA	PF00578.21	gi|429216882|ref|YP_007174872.1|	-	1.4e-36	125.1	0.0	1.8e-36	124.8	0.0	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.10	gi|429216882|ref|YP_007174872.1|	-	6.2e-15	55.2	0.0	7.3e-15	55.0	0.0	1.1	1	0	0	1	1	1	1	Redoxin
SCO1-SenC	PF02630.14	gi|429216882|ref|YP_007174872.1|	-	0.081	12.8	0.0	0.15	12.0	0.0	1.4	1	0	0	1	1	1	0	SCO1/SenC
Myosin_TH1	PF06017.13	gi|429216882|ref|YP_007174872.1|	-	0.084	12.5	0.0	0.12	12.0	0.0	1.2	1	0	0	1	1	1	0	Unconventional	myosin	tail,	actin-	and	lipid-binding
Pfk_N	PF18468.1	gi|429216882|ref|YP_007174872.1|	-	0.14	12.6	0.0	0.25	11.8	0.0	1.4	1	0	0	1	1	1	0	Phosphofructokinase	N-terminal	domain	yeast
Peptidase_M20	PF01546.28	gi|429216883|ref|YP_007174873.1|	-	9.5e-36	123.4	0.0	1.2e-35	123.1	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.14	gi|429216883|ref|YP_007174873.1|	-	4e-19	68.5	0.2	1.6e-18	66.6	0.0	2.1	3	0	0	3	3	3	1	Peptidase	dimerisation	domain
Peptidase_M28	PF04389.17	gi|429216883|ref|YP_007174873.1|	-	0.0018	18.0	0.0	0.0041	16.8	0.0	1.5	2	0	0	2	2	2	1	Peptidase	family	M28
Clathrin-link	PF09268.10	gi|429216883|ref|YP_007174873.1|	-	0.1	12.0	1.5	0.56	9.6	0.4	2.6	2	0	0	2	2	2	0	Clathrin,	heavy-chain	linker
PALP	PF00291.25	gi|429216884|ref|YP_007174874.1|	-	7.4e-38	130.6	0.0	8.7e-38	130.4	0.0	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
ATPase	PF06745.13	gi|429216886|ref|YP_007174876.1|	-	3e-59	200.2	6.4	2.8e-58	197.0	3.2	2.1	2	0	0	2	2	2	1	KaiC
GvpD	PF07088.11	gi|429216886|ref|YP_007174876.1|	-	1.2e-06	27.5	2.9	2.1e-05	23.3	2.9	2.2	1	1	0	1	1	1	1	GvpD	gas	vesicle	protein
AAA_14	PF13173.6	gi|429216886|ref|YP_007174876.1|	-	3e-05	24.0	0.4	8.5e-05	22.6	0.4	1.8	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|429216886|ref|YP_007174876.1|	-	4.8e-05	23.6	0.3	0.00015	22.0	0.1	1.9	2	1	0	2	2	2	1	AAA	domain
AAA_18	PF13238.6	gi|429216886|ref|YP_007174876.1|	-	6.1e-05	23.6	0.1	0.00013	22.5	0.1	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_25	PF13481.6	gi|429216886|ref|YP_007174876.1|	-	0.00016	21.3	0.0	0.0006	19.4	0.0	1.9	2	1	0	2	2	2	1	AAA	domain
DnaB_C	PF03796.15	gi|429216886|ref|YP_007174876.1|	-	0.00034	20.0	0.0	0.00062	19.2	0.0	1.4	1	0	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
AAA_24	PF13479.6	gi|429216886|ref|YP_007174876.1|	-	0.00039	20.2	1.1	0.00039	20.2	1.1	1.9	2	1	0	2	2	2	1	AAA	domain
DUF2075	PF09848.9	gi|429216886|ref|YP_007174876.1|	-	0.00052	19.4	0.0	0.00069	19.0	0.0	1.1	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
ABC_tran	PF00005.27	gi|429216886|ref|YP_007174876.1|	-	0.0014	19.1	0.0	0.0032	18.0	0.0	1.6	1	0	0	1	1	1	1	ABC	transporter
AAA_16	PF13191.6	gi|429216886|ref|YP_007174876.1|	-	0.0085	16.5	0.1	0.021	15.2	0.1	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA	PF00004.29	gi|429216886|ref|YP_007174876.1|	-	0.02	15.3	1.5	0.14	12.6	0.4	2.4	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Zeta_toxin	PF06414.12	gi|429216886|ref|YP_007174876.1|	-	0.021	14.1	0.0	0.035	13.4	0.0	1.2	1	0	0	1	1	1	0	Zeta	toxin
RNA_helicase	PF00910.22	gi|429216886|ref|YP_007174876.1|	-	0.036	14.4	0.1	1.2	9.6	0.0	2.4	2	0	0	2	2	2	0	RNA	helicase
AAA_7	PF12775.7	gi|429216886|ref|YP_007174876.1|	-	0.053	13.0	0.0	0.11	12.0	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
AAA_19	PF13245.6	gi|429216886|ref|YP_007174876.1|	-	0.077	13.3	0.0	0.17	12.2	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
TniB	PF05621.11	gi|429216886|ref|YP_007174876.1|	-	0.11	11.9	1.0	1.9	7.8	1.0	2.2	1	1	0	1	1	1	0	Bacterial	TniB	protein
Sigma54_activat	PF00158.26	gi|429216886|ref|YP_007174876.1|	-	0.14	11.8	0.0	0.3	10.8	0.0	1.6	1	1	0	1	1	1	0	Sigma-54	interaction	domain
ATP-synt_ab	PF00006.25	gi|429216886|ref|YP_007174876.1|	-	0.15	11.7	0.0	0.42	10.2	0.0	1.3	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
PDH	PF02153.17	gi|429216887|ref|YP_007174877.1|	-	1.5e-13	50.3	0.0	2.1e-13	49.9	0.0	1.2	1	0	0	1	1	1	1	Prephenate	dehydrogenase
2-Hacid_dh_C	PF02826.19	gi|429216887|ref|YP_007174877.1|	-	3.2e-07	29.9	0.0	1.9e-06	27.4	0.0	2.0	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.17	gi|429216887|ref|YP_007174877.1|	-	2.4e-06	28.0	0.1	0.00032	21.2	0.1	2.7	1	1	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_2	PF03446.15	gi|429216887|ref|YP_007174877.1|	-	1.8e-05	25.0	0.1	8.2e-05	22.8	0.1	2.3	2	1	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
3HCDH_N	PF02737.18	gi|429216887|ref|YP_007174877.1|	-	0.00025	21.0	0.0	0.0008	19.3	0.0	1.8	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Sacchrp_dh_NADP	PF03435.18	gi|429216887|ref|YP_007174877.1|	-	0.00068	19.9	0.0	0.0018	18.5	0.0	1.7	1	0	0	1	1	1	1	Saccharopine	dehydrogenase	NADP	binding	domain
DUF2325	PF10087.9	gi|429216887|ref|YP_007174877.1|	-	0.023	14.8	0.6	0.076	13.1	0.1	2.1	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2325)
IlvN	PF07991.12	gi|429216887|ref|YP_007174877.1|	-	0.049	13.2	0.2	0.38	10.3	0.1	2.4	2	1	0	2	2	2	0	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
UDPG_MGDP_dh_N	PF03721.14	gi|429216887|ref|YP_007174877.1|	-	0.083	12.5	0.3	0.4	10.2	0.2	2.0	1	1	1	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
dUTPase_2	PF08761.11	gi|429216887|ref|YP_007174877.1|	-	0.098	12.8	9.5	1.8	8.7	1.8	2.9	1	1	1	2	2	2	0	dUTPase
NAD_Gly3P_dh_N	PF01210.23	gi|429216887|ref|YP_007174877.1|	-	0.12	12.3	0.0	0.88	9.5	0.0	2.2	1	1	1	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
MnmE_helical	PF12631.7	gi|429216887|ref|YP_007174877.1|	-	0.14	12.4	0.4	0.31	11.2	0.4	1.6	1	1	0	1	1	1	0	MnmE	helical	domain
B12-binding	PF02310.19	gi|429216887|ref|YP_007174877.1|	-	0.2	11.7	0.0	1.8	8.7	0.0	2.2	2	0	0	2	2	2	0	B12	binding	domain
DapB_N	PF01113.20	gi|429216887|ref|YP_007174877.1|	-	0.34	11.1	1.3	1.4	9.1	0.4	2.4	2	1	0	2	2	2	0	Dihydrodipicolinate	reductase,	N-terminus
Aminotran_1_2	PF00155.21	gi|429216888|ref|YP_007174878.1|	-	3.1e-42	145.0	0.0	3.6e-42	144.8	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Alliinase_C	PF04864.13	gi|429216888|ref|YP_007174878.1|	-	1.4e-11	43.9	0.2	5.3e-11	42.0	0.2	1.6	1	1	1	2	2	2	1	Allinase
CinA_KH	PF18146.1	gi|429216888|ref|YP_007174878.1|	-	0.02	15.0	0.1	0.43	10.8	0.1	2.4	2	0	0	2	2	2	0	Damage-inducible	protein	CinA	KH	domain
Aminotran_MocR	PF12897.7	gi|429216888|ref|YP_007174878.1|	-	0.12	11.1	0.0	6.1	5.5	0.0	2.2	2	0	0	2	2	2	0	Alanine-glyoxylate	amino-transferase
Aminotran_1_2	PF00155.21	gi|429216889|ref|YP_007174879.1|	-	2.7e-39	135.4	0.0	3.2e-39	135.1	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_MocR	PF12897.7	gi|429216889|ref|YP_007174879.1|	-	1.3e-10	40.6	0.0	1.9e-10	40.1	0.0	1.1	1	0	0	1	1	1	1	Alanine-glyoxylate	amino-transferase
DegT_DnrJ_EryC1	PF01041.17	gi|429216889|ref|YP_007174879.1|	-	0.0001	21.7	0.0	0.00016	21.1	0.0	1.3	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Beta_elim_lyase	PF01212.21	gi|429216889|ref|YP_007174879.1|	-	0.019	14.2	0.0	0.03	13.6	0.0	1.3	1	0	0	1	1	1	0	Beta-eliminating	lyase
Aminotran_3	PF00202.21	gi|429216889|ref|YP_007174879.1|	-	0.06	12.0	0.0	0.11	11.1	0.0	1.4	1	1	0	1	1	1	0	Aminotransferase	class-III
tRNA_SAD	PF07973.14	gi|429216890|ref|YP_007174880.1|	-	3.9e-11	42.9	0.9	7.4e-11	42.0	0.9	1.5	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
tRNA-synt_2c	PF01411.19	gi|429216890|ref|YP_007174880.1|	-	8.4e-09	34.5	0.0	1.2e-08	33.9	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(A)
Glyco_transf_5	PF08323.11	gi|429216892|ref|YP_007174882.1|	-	8.6e-37	127.1	0.0	1.3e-36	126.6	0.0	1.2	1	0	0	1	1	1	1	Starch	synthase	catalytic	domain
Glycos_transf_1	PF00534.20	gi|429216892|ref|YP_007174882.1|	-	1e-21	77.2	0.0	2.2e-21	76.2	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|429216892|ref|YP_007174882.1|	-	4.2e-14	53.1	0.0	1.2e-13	51.6	0.0	1.7	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|429216892|ref|YP_007174882.1|	-	2.4e-12	47.2	0.2	6.2e-11	42.6	0.2	2.6	1	1	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_4_4	PF13579.6	gi|429216892|ref|YP_007174882.1|	-	6.5e-07	29.9	0.0	6.2e-06	26.7	0.0	2.2	1	1	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_1_2	PF13524.6	gi|429216892|ref|YP_007174882.1|	-	0.00058	20.2	0.0	0.0024	18.2	0.0	2.0	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_hydro_57	PF03065.15	gi|429216893|ref|YP_007174883.1|	-	6.9e-52	176.7	3.3	6.9e-52	176.7	3.3	2.4	3	0	0	3	3	3	1	Glycosyl	hydrolase	family	57
Nrap_D6	PF17407.2	gi|429216893|ref|YP_007174883.1|	-	0.038	14.2	0.1	0.094	12.9	0.1	1.7	1	0	0	1	1	1	0	Nrap	protein	domain	6
Terminase_3C	PF17288.2	gi|429216893|ref|YP_007174883.1|	-	0.87	10.0	5.0	9.5	6.6	1.3	2.8	3	1	0	3	3	3	0	Terminase	RNAseH	like	domain
LZ3wCH	PF18517.1	gi|429216893|ref|YP_007174883.1|	-	0.88	9.7	4.4	7.2	6.8	0.2	3.3	3	0	0	3	3	3	0	Leucine	zipper	with	capping	helix	domain
DUF2469	PF10611.9	gi|429216893|ref|YP_007174883.1|	-	1.4	9.5	8.0	0.079	13.5	0.8	2.5	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2469)
ORC3_N	PF07034.11	gi|429216894|ref|YP_007174884.1|	-	0.056	12.5	0.3	0.081	12.0	0.3	1.2	1	0	0	1	1	1	0	Origin	recognition	complex	(ORC)	subunit	3	N-terminus
Nitro_FeMo-Co	PF02579.17	gi|429216895|ref|YP_007174885.1|	-	1.5e-12	47.7	0.5	5.5e-12	45.9	0.5	1.8	1	1	0	1	1	1	1	Dinitrogenase	iron-molybdenum	cofactor
FTA2	PF13095.6	gi|429216895|ref|YP_007174885.1|	-	0.0012	18.5	0.1	0.0016	18.1	0.1	1.1	1	0	0	1	1	1	1	Kinetochore	Sim4	complex	subunit	FTA2
Herpes_UL37_2	PF07413.11	gi|429216895|ref|YP_007174885.1|	-	0.066	12.4	0.0	0.069	12.4	0.0	1.0	1	0	0	1	1	1	0	Betaherpesvirus	immediate-early	glycoprotein	UL37
BPD_transp_1	PF00528.22	gi|429216896|ref|YP_007174886.1|	-	1.8e-16	60.4	60.7	2.6e-12	46.9	18.6	3.3	2	1	1	3	3	3	2	Binding-protein-dependent	transport	system	inner	membrane	component
DUF5305	PF17231.2	gi|429216896|ref|YP_007174886.1|	-	0.33	10.3	4.9	12	5.2	0.1	3.5	3	0	0	3	3	3	0	Family	of	unknown	function	(DUF5305)
ABC_tran	PF00005.27	gi|429216897|ref|YP_007174887.1|	-	4.1e-28	98.6	0.0	6e-28	98.1	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|429216897|ref|YP_007174887.1|	-	2.2e-07	31.0	1.0	0.015	15.1	0.3	2.1	1	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_22	PF13401.6	gi|429216897|ref|YP_007174887.1|	-	1e-05	25.8	0.3	0.00013	22.2	0.3	2.1	1	1	0	1	1	1	1	AAA	domain
RsgA_GTPase	PF03193.16	gi|429216897|ref|YP_007174887.1|	-	0.00024	21.1	0.1	0.00037	20.4	0.1	1.4	1	0	0	1	1	1	1	RsgA	GTPase
AAA_16	PF13191.6	gi|429216897|ref|YP_007174887.1|	-	0.00037	20.9	0.0	0.00066	20.1	0.0	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_29	PF13555.6	gi|429216897|ref|YP_007174887.1|	-	0.002	17.8	0.1	0.0035	17.0	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
MMR_HSR1	PF01926.23	gi|429216897|ref|YP_007174887.1|	-	0.0035	17.4	0.2	0.019	15.0	0.2	2.0	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
SMC_N	PF02463.19	gi|429216897|ref|YP_007174887.1|	-	0.004	16.6	0.2	0.77	9.2	0.0	2.2	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
Rad17	PF03215.15	gi|429216897|ref|YP_007174887.1|	-	0.013	15.4	0.0	0.023	14.6	0.0	1.4	1	0	0	1	1	1	0	Rad17	P-loop	domain
AAA_15	PF13175.6	gi|429216897|ref|YP_007174887.1|	-	0.027	14.2	0.0	0.22	11.2	0.0	2.0	1	1	0	2	2	2	0	AAA	ATPase	domain
AAA	PF00004.29	gi|429216897|ref|YP_007174887.1|	-	0.035	14.5	0.2	0.25	11.8	0.2	2.0	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
NB-ARC	PF00931.22	gi|429216897|ref|YP_007174887.1|	-	0.041	13.1	0.0	0.13	11.4	0.1	1.7	2	0	0	2	2	2	0	NB-ARC	domain
AAA_33	PF13671.6	gi|429216897|ref|YP_007174887.1|	-	0.055	13.6	0.0	0.073	13.2	0.0	1.4	1	1	0	1	1	1	0	AAA	domain
AAA_5	PF07728.14	gi|429216897|ref|YP_007174887.1|	-	0.065	13.2	0.1	0.13	12.2	0.1	1.5	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_30	PF13604.6	gi|429216897|ref|YP_007174887.1|	-	0.093	12.4	0.0	0.16	11.6	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_23	PF13476.6	gi|429216897|ref|YP_007174887.1|	-	0.11	13.0	0.0	0.21	12.1	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
ATPase_2	PF01637.18	gi|429216897|ref|YP_007174887.1|	-	0.12	12.3	0.5	0.27	11.1	0.0	1.8	3	0	0	3	3	3	0	ATPase	domain	predominantly	from	Archaea
RNA_helicase	PF00910.22	gi|429216897|ref|YP_007174887.1|	-	0.12	12.8	0.1	0.49	10.8	0.0	1.9	2	0	0	2	2	2	0	RNA	helicase
AAA_18	PF13238.6	gi|429216897|ref|YP_007174887.1|	-	0.15	12.6	0.6	0.34	11.5	0.3	1.7	2	0	0	2	2	2	0	AAA	domain
IstB_IS21	PF01695.17	gi|429216897|ref|YP_007174887.1|	-	0.2	11.4	0.0	0.42	10.3	0.0	1.5	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA_24	PF13479.6	gi|429216897|ref|YP_007174887.1|	-	0.2	11.4	0.1	0.4	10.4	0.1	1.5	1	0	0	1	1	1	0	AAA	domain
Cation_efflux	PF01545.21	gi|429216898|ref|YP_007174888.1|	-	1.3e-30	106.6	16.7	1.7e-30	106.3	16.7	1.1	1	0	0	1	1	1	1	Cation	efflux	family
ZT_dimer	PF16916.5	gi|429216898|ref|YP_007174888.1|	-	2.7e-23	81.9	0.0	5.9e-23	80.8	0.0	1.6	1	0	0	1	1	1	1	Dimerisation	domain	of	Zinc	Transporter
Nitro_FeMo-Co	PF02579.17	gi|429216898|ref|YP_007174888.1|	-	0.003	17.8	0.3	0.0093	16.3	0.1	1.9	2	0	0	2	2	2	1	Dinitrogenase	iron-molybdenum	cofactor
NUDIX	PF00293.28	gi|429216899|ref|YP_007174889.1|	-	2.8e-15	56.5	0.0	3.8e-15	56.1	0.0	1.2	1	0	0	1	1	1	1	NUDIX	domain
Imm74	PF15603.6	gi|429216899|ref|YP_007174889.1|	-	0.0078	16.4	0.0	0.031	14.4	0.0	1.9	2	0	0	2	2	2	1	Immunity	protein	74
NUDIX_4	PF14815.6	gi|429216899|ref|YP_007174889.1|	-	0.13	12.2	0.0	0.38	10.7	0.0	1.8	1	1	0	1	1	1	0	NUDIX	domain
Na_H_Exchanger	PF00999.21	gi|429216900|ref|YP_007174890.1|	-	1.4e-44	152.4	58.3	1.7e-44	152.2	58.3	1.0	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
NTP_transferase	PF00483.23	gi|429216901|ref|YP_007174891.1|	-	1.6e-41	142.6	0.0	2e-41	142.2	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
Hexapep	PF00132.24	gi|429216901|ref|YP_007174891.1|	-	2.3e-08	33.4	10.8	0.00011	21.8	3.2	4.3	2	2	2	4	4	4	3	Bacterial	transferase	hexapeptide	(six	repeats)
DUF4954	PF16314.5	gi|429216901|ref|YP_007174891.1|	-	0.00037	18.8	3.8	0.00082	17.6	3.8	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4954)
Fucokinase	PF07959.12	gi|429216901|ref|YP_007174891.1|	-	0.013	14.5	5.1	0.029	13.3	4.8	1.9	2	1	0	2	2	2	0	L-fucokinase
NTP_transf_3	PF12804.7	gi|429216901|ref|YP_007174891.1|	-	0.22	11.9	0.0	0.38	11.1	0.0	1.3	1	0	0	1	1	1	0	MobA-like	NTP	transferase	domain
DUF1508	PF07411.12	gi|429216902|ref|YP_007174892.1|	-	0.00013	21.7	0.1	0.00018	21.3	0.1	1.4	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF1508)
RNA_pol_inhib	PF16857.5	gi|429216902|ref|YP_007174892.1|	-	0.065	13.0	0.0	0.11	12.3	0.0	1.4	1	0	0	1	1	1	0	RNA	polymerase	inhibitor
Jag_N	PF14804.6	gi|429216902|ref|YP_007174892.1|	-	0.11	12.9	2.2	0.73	10.2	0.1	2.1	2	0	0	2	2	2	0	Jag	N-terminus
DpnD-PcfM	PF14207.6	gi|429216902|ref|YP_007174892.1|	-	0.11	12.4	0.5	0.11	12.4	0.5	1.8	2	1	0	2	2	2	0	DpnD/PcfM-like	protein
Aminotran_3	PF00202.21	gi|429216903|ref|YP_007174893.1|	-	3.4e-130	434.4	0.0	4.1e-130	434.1	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
Aminotran_1_2	PF00155.21	gi|429216903|ref|YP_007174893.1|	-	1.7e-05	24.2	0.0	3.7e-05	23.1	0.0	1.5	2	0	0	2	2	2	1	Aminotransferase	class	I	and	II
GntR	PF00392.21	gi|429216904|ref|YP_007174894.1|	-	0.004	16.8	0.0	0.0047	16.5	0.0	1.2	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
CRISPR_Cas9_WED	PF18061.1	gi|429216904|ref|YP_007174894.1|	-	0.025	14.7	0.1	0.027	14.6	0.1	1.1	1	0	0	1	1	1	0	CRISPR-Cas9	WED	domain
HTH_24	PF13412.6	gi|429216904|ref|YP_007174894.1|	-	0.036	13.6	0.1	0.061	12.9	0.1	1.5	1	1	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.22	gi|429216905|ref|YP_007174895.1|	-	0.00055	19.8	0.0	0.0007	19.5	0.0	1.2	1	0	0	1	1	1	1	MarR	family
Fe_dep_repress	PF01325.19	gi|429216905|ref|YP_007174895.1|	-	0.00082	19.5	0.0	0.0015	18.7	0.0	1.4	1	1	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_36	PF13730.6	gi|429216905|ref|YP_007174895.1|	-	0.0019	18.1	0.1	0.0025	17.8	0.1	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
FeoC	PF09012.10	gi|429216905|ref|YP_007174895.1|	-	0.0025	17.8	0.0	0.003	17.6	0.0	1.2	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
MarR_2	PF12802.7	gi|429216905|ref|YP_007174895.1|	-	0.0053	16.6	0.0	0.0069	16.2	0.0	1.2	1	0	0	1	1	1	1	MarR	family
HTH_11	PF08279.12	gi|429216905|ref|YP_007174895.1|	-	0.0096	15.9	0.0	0.012	15.5	0.0	1.3	1	0	0	1	1	1	1	HTH	domain
DUF2250	PF10007.9	gi|429216905|ref|YP_007174895.1|	-	0.015	15.4	0.1	0.017	15.2	0.1	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
RepL	PF05732.11	gi|429216905|ref|YP_007174895.1|	-	0.016	14.6	0.0	0.018	14.5	0.0	1.1	1	0	0	1	1	1	0	Firmicute	plasmid	replication	protein	(RepL)
NUMOD1	PF07453.13	gi|429216905|ref|YP_007174895.1|	-	0.016	15.4	0.1	0.029	14.6	0.1	1.5	1	0	0	1	1	1	0	NUMOD1	domain
Rrf2	PF02082.20	gi|429216905|ref|YP_007174895.1|	-	0.022	15.1	0.0	0.027	14.8	0.0	1.2	1	0	0	1	1	1	0	Transcriptional	regulator
TrmB	PF01978.19	gi|429216905|ref|YP_007174895.1|	-	0.024	14.5	0.0	0.035	14.0	0.0	1.4	1	1	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_DeoR	PF08220.12	gi|429216905|ref|YP_007174895.1|	-	0.027	14.2	0.0	0.041	13.6	0.0	1.4	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
Ribosomal_S25	PF03297.15	gi|429216905|ref|YP_007174895.1|	-	0.035	14.3	0.1	0.038	14.2	0.1	1.1	1	0	0	1	1	1	0	S25	ribosomal	protein
IF2_N	PF04760.15	gi|429216905|ref|YP_007174895.1|	-	0.037	13.8	0.3	0.16	11.9	0.3	2.0	1	1	0	1	1	1	0	Translation	initiation	factor	IF-2,	N-terminal	region
HTH_Crp_2	PF13545.6	gi|429216905|ref|YP_007174895.1|	-	0.039	13.9	0.0	0.053	13.5	0.0	1.3	1	1	0	1	1	1	0	Crp-like	helix-turn-helix	domain
HTH_27	PF13463.6	gi|429216905|ref|YP_007174895.1|	-	0.042	14.3	0.0	0.087	13.3	0.0	1.5	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
Mga	PF05043.13	gi|429216905|ref|YP_007174895.1|	-	0.049	14.2	0.1	0.06	13.9	0.1	1.2	1	0	0	1	1	1	0	Mga	helix-turn-helix	domain
HTH_24	PF13412.6	gi|429216905|ref|YP_007174895.1|	-	0.05	13.2	0.0	0.066	12.8	0.0	1.3	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
HTH_10	PF04967.12	gi|429216905|ref|YP_007174895.1|	-	0.05	13.4	0.0	0.11	12.3	0.0	1.7	2	0	0	2	2	2	0	HTH	DNA	binding	domain
PI-TkoII_IV	PF18714.1	gi|429216905|ref|YP_007174895.1|	-	0.07	12.6	0.2	0.16	11.4	0.2	1.7	1	1	1	2	2	2	0	DNA	polymerase	II	intein	Domain	IV
Macro	PF01661.21	gi|429216908|ref|YP_007174898.1|	-	2.8e-28	98.3	0.1	3.8e-28	97.9	0.1	1.2	1	0	0	1	1	1	1	Macro	domain
Macro_2	PF14519.6	gi|429216908|ref|YP_007174898.1|	-	0.014	14.7	0.1	0.083	12.2	0.1	2.1	1	1	0	1	1	1	0	Macro-like	domain
PALP	PF00291.25	gi|429216909|ref|YP_007174899.1|	-	2.8e-16	59.8	0.0	1.7e-13	50.6	0.0	3.2	1	1	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
Zn-ribbon_8	PF09723.10	gi|429216909|ref|YP_007174899.1|	-	0.041	14.0	2.8	0.08	13.1	2.8	1.5	1	0	0	1	1	1	0	Zinc	ribbon	domain
HypA	PF01155.19	gi|429216909|ref|YP_007174899.1|	-	0.059	13.4	0.4	0.2	11.7	0.2	1.9	2	0	0	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Rubredoxin_2	PF18073.1	gi|429216909|ref|YP_007174899.1|	-	0.073	12.8	3.5	0.8	9.5	1.9	2.3	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
zinc-ribbons_6	PF07191.12	gi|429216909|ref|YP_007174899.1|	-	0.11	12.5	0.3	0.19	11.7	0.3	1.4	1	0	0	1	1	1	0	zinc-ribbons
zf-FPG_IleRS	PF06827.14	gi|429216909|ref|YP_007174899.1|	-	0.15	11.9	0.4	0.41	10.5	0.4	1.7	1	0	0	1	1	1	0	Zinc	finger	found	in	FPG	and	IleRS
zinc_ribbon_2	PF13240.6	gi|429216909|ref|YP_007174899.1|	-	0.46	10.3	5.4	0.81	9.5	4.6	1.8	1	1	1	2	2	2	0	zinc-ribbon	domain
HAD_2	PF13419.6	gi|429216910|ref|YP_007174900.1|	-	3.7e-27	95.5	0.6	4.7e-27	95.2	0.6	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.26	gi|429216910|ref|YP_007174900.1|	-	1.5e-11	45.0	0.2	8.2e-11	42.6	0.2	1.9	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.7	gi|429216910|ref|YP_007174900.1|	-	9e-11	42.5	0.0	1.2e-10	42.1	0.0	1.1	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_6	PF13344.6	gi|429216910|ref|YP_007174900.1|	-	0.00017	21.7	0.1	0.0094	16.0	0.0	2.5	2	1	0	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.6	gi|429216910|ref|YP_007174900.1|	-	0.0037	17.3	0.0	0.008	16.2	0.0	1.6	1	0	0	1	1	1	1	HAD-hyrolase-like
PadR	PF03551.14	gi|429216911|ref|YP_007174901.1|	-	1.3e-13	50.7	0.8	2e-13	50.1	0.8	1.3	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_34	PF13601.6	gi|429216911|ref|YP_007174901.1|	-	2.7e-05	24.3	0.1	3.6e-05	23.8	0.1	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_45	PF14947.6	gi|429216911|ref|YP_007174901.1|	-	0.00046	20.1	1.7	0.00046	20.1	1.7	2.2	1	1	1	2	2	2	1	Winged	helix-turn-helix
DUF2513	PF10711.9	gi|429216911|ref|YP_007174901.1|	-	0.0013	19.0	0.1	0.0016	18.7	0.1	1.3	1	0	0	1	1	1	1	Hypothetical	protein	(DUF2513)
HTH_12	PF08461.10	gi|429216911|ref|YP_007174901.1|	-	0.007	16.3	2.2	0.0076	16.2	0.4	2.0	2	1	0	2	2	2	1	Ribonuclease	R	winged-helix	domain
YjcQ	PF09639.10	gi|429216911|ref|YP_007174901.1|	-	0.0094	16.1	1.0	0.012	15.8	1.0	1.3	1	0	0	1	1	1	1	YjcQ	protein
RTP	PF02334.16	gi|429216911|ref|YP_007174901.1|	-	0.052	14.2	3.6	0.069	13.8	3.6	1.2	1	0	0	1	1	1	0	Replication	terminator	protein
Phage_pRha	PF09669.10	gi|429216911|ref|YP_007174901.1|	-	0.13	12.8	0.8	8.3	7.1	0.0	2.2	1	1	1	2	2	2	0	Phage	regulatory	protein	Rha	(Phage_pRha)
Aminotran_1_2	PF00155.21	gi|429216912|ref|YP_007174902.1|	-	3.9e-37	128.3	0.0	4.5e-37	128.1	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_MocR	PF12897.7	gi|429216912|ref|YP_007174902.1|	-	4.9e-11	42.0	0.0	7.2e-11	41.5	0.0	1.1	1	0	0	1	1	1	1	Alanine-glyoxylate	amino-transferase
DegT_DnrJ_EryC1	PF01041.17	gi|429216912|ref|YP_007174902.1|	-	5.5e-05	22.6	0.0	8.7e-05	22.0	0.0	1.3	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Cys_Met_Meta_PP	PF01053.20	gi|429216912|ref|YP_007174902.1|	-	0.011	14.3	0.0	0.016	13.8	0.0	1.2	1	0	0	1	1	1	0	Cys/Met	metabolism	PLP-dependent	enzyme
Aminotran_3	PF00202.21	gi|429216912|ref|YP_007174902.1|	-	0.021	13.5	0.0	0.043	12.5	0.0	1.4	1	1	0	1	1	1	0	Aminotransferase	class-III
Beta_elim_lyase	PF01212.21	gi|429216912|ref|YP_007174902.1|	-	0.035	13.4	0.0	0.051	12.8	0.0	1.3	1	0	0	1	1	1	0	Beta-eliminating	lyase
DUF5006	PF16397.5	gi|429216912|ref|YP_007174902.1|	-	0.068	12.4	0.0	0.14	11.4	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5006)
OSCP	PF00213.18	gi|429216912|ref|YP_007174902.1|	-	0.12	12.5	0.2	5.3	7.1	0.0	2.4	2	0	0	2	2	2	0	ATP	synthase	delta	(OSCP)	subunit
tRNA-synt_1d	PF00750.19	gi|429216913|ref|YP_007174903.1|	-	2.1e-35	122.3	0.9	5.1e-33	114.5	0.9	2.4	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(R)
DALR_1	PF05746.15	gi|429216913|ref|YP_007174903.1|	-	2.6e-21	76.0	0.3	9.4e-21	74.2	0.0	2.2	2	0	0	2	2	2	1	DALR	anticodon	binding	domain
tRNA-synt_1e	PF01406.19	gi|429216913|ref|YP_007174903.1|	-	0.0013	18.1	0.0	0.0029	17.0	0.0	1.5	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(C)	catalytic	domain
IF2_N	PF04760.15	gi|429216913|ref|YP_007174903.1|	-	0.015	15.1	0.5	0.78	9.6	0.2	2.9	2	0	0	2	2	2	0	Translation	initiation	factor	IF-2,	N-terminal	region
tRNA-synt_1g	PF09334.11	gi|429216913|ref|YP_007174903.1|	-	0.018	13.8	0.3	0.13	11.0	0.0	2.4	3	0	0	3	3	3	0	tRNA	synthetases	class	I	(M)
tRNA-synt_1	PF00133.22	gi|429216913|ref|YP_007174903.1|	-	0.019	13.2	0.0	0.04	12.2	0.0	1.5	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(I,	L,	M	and	V)
ACT_4	PF13291.6	gi|429216913|ref|YP_007174903.1|	-	0.036	14.7	0.3	0.33	11.6	0.1	2.6	2	0	0	2	2	2	0	ACT	domain
tRNA-synt_1f	PF01921.18	gi|429216913|ref|YP_007174903.1|	-	0.044	12.7	0.2	4.2	6.2	0.0	2.9	3	1	0	3	3	3	0	tRNA	synthetases	class	I	(K)
NicO	PF03824.16	gi|429216914|ref|YP_007174904.1|	-	0.0032	16.9	1.6	0.0032	16.9	1.6	2.3	2	1	0	2	2	2	1	High-affinity	nickel-transport	protein
Pox_ser-thr_kin	PF05445.11	gi|429216915|ref|YP_007174905.1|	-	0.037	13.0	3.2	0.042	12.8	3.2	1.1	1	0	0	1	1	1	0	Poxvirus	serine/threonine	protein	kinase
tRNA-synt_1	PF00133.22	gi|429216916|ref|YP_007174906.1|	-	1.9e-179	597.8	3.6	2.6e-179	597.4	3.6	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.13	gi|429216916|ref|YP_007174906.1|	-	2.8e-31	108.6	1.4	6.7e-31	107.3	1.4	1.7	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.11	gi|429216916|ref|YP_007174906.1|	-	5.6e-21	74.7	2.5	6.8e-08	31.7	0.0	4.5	3	2	0	3	3	3	3	tRNA	synthetases	class	I	(M)
tRNA-synt_1e	PF01406.19	gi|429216916|ref|YP_007174906.1|	-	6.6e-05	22.4	0.3	0.0016	17.9	0.0	2.8	2	1	0	2	2	2	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1f	PF01921.18	gi|429216916|ref|YP_007174906.1|	-	8.7e-05	21.6	0.1	0.00037	19.5	0.1	2.1	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(K)
zf-TFIIB	PF13453.6	gi|429216916|ref|YP_007174906.1|	-	0.0098	15.2	1.0	6.4	6.2	0.0	3.3	3	0	0	3	3	3	2	Transcription	factor	zinc-finger
Mu-like_Com	PF10122.9	gi|429216916|ref|YP_007174906.1|	-	0.034	13.6	0.9	0.28	10.6	0.1	2.5	2	0	0	2	2	2	0	Mu-like	prophage	protein	Com
DUF89	PF01937.19	gi|429216916|ref|YP_007174906.1|	-	0.089	11.7	1.7	0.79	8.6	0.9	2.5	3	0	0	3	3	3	0	Protein	of	unknown	function	DUF89
zf-IS66	PF13005.7	gi|429216916|ref|YP_007174906.1|	-	0.39	11.2	1.8	7.7	7.0	0.1	3.3	3	0	0	3	3	3	0	zinc-finger	binding	domain	of	transposase	IS66
Zn-ribbon_8	PF09723.10	gi|429216916|ref|YP_007174906.1|	-	8.8	6.5	6.8	16	5.7	3.3	2.9	2	1	0	2	2	2	0	Zinc	ribbon	domain
Cas_Cas4	PF01930.17	gi|429216917|ref|YP_007174907.1|	-	1.5e-12	47.9	0.0	2.1e-12	47.4	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF83
PDDEXK_1	PF12705.7	gi|429216917|ref|YP_007174907.1|	-	2.6e-08	34.1	2.8	2e-05	24.6	0.0	2.1	1	1	1	2	2	2	2	PD-(D/E)XK	nuclease	superfamily
UPF0179	PF03684.13	gi|429216917|ref|YP_007174907.1|	-	0.074	12.9	0.4	0.17	11.8	0.1	1.7	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0179)
AAA_5	PF07728.14	gi|429216918|ref|YP_007174908.1|	-	7.7e-18	64.8	0.0	1.3e-17	64.1	0.0	1.4	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_3	PF07726.11	gi|429216918|ref|YP_007174908.1|	-	0.00015	21.6	0.0	0.0096	15.8	0.0	2.4	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA	PF00004.29	gi|429216918|ref|YP_007174908.1|	-	0.00031	21.1	1.0	0.0023	18.4	0.2	2.6	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_18	PF13238.6	gi|429216918|ref|YP_007174908.1|	-	0.0006	20.4	0.0	0.0038	17.8	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_11	PF13086.6	gi|429216918|ref|YP_007174908.1|	-	0.003	17.4	0.1	0.014	15.2	0.1	1.9	1	1	0	1	1	1	1	AAA	domain
MCM_lid	PF17855.1	gi|429216918|ref|YP_007174908.1|	-	0.0036	17.7	1.0	0.01	16.2	0.1	2.1	2	1	0	2	2	2	1	MCM	AAA-lid	domain
AAA_16	PF13191.6	gi|429216918|ref|YP_007174908.1|	-	0.0064	16.9	0.0	0.0095	16.3	0.0	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
Sigma54_activat	PF00158.26	gi|429216918|ref|YP_007174908.1|	-	0.011	15.4	0.0	5.6	6.6	0.0	2.3	2	0	0	2	2	2	0	Sigma-54	interaction	domain
AAA_30	PF13604.6	gi|429216918|ref|YP_007174908.1|	-	0.011	15.4	0.0	0.024	14.4	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_lid_2	PF17863.1	gi|429216918|ref|YP_007174908.1|	-	0.012	15.5	0.0	0.024	14.5	0.0	1.4	1	0	0	1	1	1	0	AAA	lid	domain
TIP49	PF06068.13	gi|429216918|ref|YP_007174908.1|	-	0.013	14.7	0.2	0.072	12.3	0.0	2.0	2	0	0	2	2	2	0	TIP49	P-loop	domain
RmlD_sub_bind	PF04321.17	gi|429216918|ref|YP_007174908.1|	-	0.022	13.9	0.0	0.035	13.2	0.0	1.2	1	0	0	1	1	1	0	RmlD	substrate	binding	domain
AAA_7	PF12775.7	gi|429216918|ref|YP_007174908.1|	-	0.026	14.0	0.0	0.099	12.1	0.0	1.9	2	0	0	2	2	2	0	P-loop	containing	dynein	motor	region
AAA_6	PF12774.7	gi|429216918|ref|YP_007174908.1|	-	0.032	13.2	0.0	4.9	6.0	0.0	2.3	2	0	0	2	2	2	0	Hydrolytic	ATP	binding	site	of	dynein	motor	region
AAA_19	PF13245.6	gi|429216918|ref|YP_007174908.1|	-	0.046	14.0	0.3	0.84	10.0	0.0	2.6	3	0	0	3	3	3	0	AAA	domain
Mg_chelatase	PF01078.21	gi|429216918|ref|YP_007174908.1|	-	0.079	12.3	0.1	1	8.7	0.0	2.4	3	0	0	3	3	3	0	Magnesium	chelatase,	subunit	ChlI
Mg_chelatase_C	PF13335.6	gi|429216918|ref|YP_007174908.1|	-	0.14	12.8	0.1	0.49	11.1	0.1	1.9	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI	C-terminal
VWA_CoxE	PF05762.14	gi|429216919|ref|YP_007174909.1|	-	3.2e-10	39.8	0.0	5.7e-10	39.0	0.0	1.3	1	0	0	1	1	1	1	VWA	domain	containing	CoxE-like	protein
DUF2201	PF09967.9	gi|429216919|ref|YP_007174909.1|	-	0.011	15.9	0.0	0.043	14.0	0.0	2.1	2	0	0	2	2	2	0	VWA-like	domain	(DUF2201)
UNC45-central	PF11701.8	gi|429216919|ref|YP_007174909.1|	-	0.053	13.5	0.4	1.4	8.9	0.1	2.8	2	0	0	2	2	2	0	Myosin-binding	striated	muscle	assembly	central
HrcA	PF01628.21	gi|429216919|ref|YP_007174909.1|	-	1.8	8.4	6.4	1	9.2	0.9	2.8	2	1	1	3	3	3	0	HrcA	protein	C	terminal	domain
zf-CRD	PF17979.1	gi|429216919|ref|YP_007174909.1|	-	3.4	7.8	6.2	18	5.4	0.1	3.2	3	1	1	4	4	4	0	Cysteine	rich	domain	with	multizinc	binding	regions
Radical_SAM	PF04055.21	gi|429216920|ref|YP_007174910.1|	-	4.1e-20	72.8	0.0	5.8e-20	72.3	0.0	1.2	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|429216920|ref|YP_007174910.1|	-	2.6e-06	27.6	0.0	6.5e-06	26.3	0.0	1.7	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
BLYB	PF05289.11	gi|429216920|ref|YP_007174910.1|	-	0.0037	17.5	2.0	0.0088	16.3	2.0	1.6	1	0	0	1	1	1	1	Borrelia	hemolysin	accessory	protein
ATP_bind_3	PF01171.20	gi|429216921|ref|YP_007174911.1|	-	3e-09	36.9	0.0	6.3e-09	35.8	0.0	1.5	1	1	0	1	1	1	1	PP-loop	family
DZR	PF12773.7	gi|429216921|ref|YP_007174911.1|	-	0.0013	18.7	7.9	0.033	14.2	0.2	3.3	3	0	0	3	3	3	1	Double	zinc	ribbon
NAD_synthase	PF02540.17	gi|429216921|ref|YP_007174911.1|	-	0.017	14.3	0.0	0.038	13.1	0.0	1.5	1	1	0	1	1	1	0	NAD	synthase
PAPS_reduct	PF01507.19	gi|429216921|ref|YP_007174911.1|	-	0.027	14.5	0.0	0.043	13.9	0.0	1.5	1	0	0	1	1	1	0	Phosphoadenosine	phosphosulfate	reductase	family
DUF5128	PF17170.4	gi|429216921|ref|YP_007174911.1|	-	0.036	13.2	2.3	0.051	12.7	2.3	1.3	1	0	0	1	1	1	0	6-bladed	beta-propeller
zf-ribbon_3	PF13248.6	gi|429216921|ref|YP_007174911.1|	-	0.95	9.0	14.2	0.18	11.3	0.8	3.9	4	0	0	4	4	4	0	zinc-ribbon	domain
zf-BED	PF02892.15	gi|429216921|ref|YP_007174911.1|	-	1.2	9.3	7.2	24	5.1	3.4	3.4	2	1	0	2	2	2	0	BED	zinc	finger
zinc_ribbon_2	PF13240.6	gi|429216921|ref|YP_007174911.1|	-	2.9	7.7	13.7	4.6	7.1	0.4	3.8	3	0	0	3	3	3	0	zinc-ribbon	domain
NUDIX	PF00293.28	gi|429216922|ref|YP_007174912.1|	-	1.2e-14	54.5	0.0	1.5e-14	54.2	0.0	1.1	1	0	0	1	1	1	1	NUDIX	domain
DUF3536	PF12055.8	gi|429216923|ref|YP_007174913.1|	-	6.5e-87	291.5	0.0	1.1e-86	290.7	0.0	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3536)
Glyco_hydro_57	PF03065.15	gi|429216923|ref|YP_007174913.1|	-	2.3e-19	69.7	0.9	2.3e-19	69.7	0.9	2.6	3	0	0	3	3	3	1	Glycosyl	hydrolase	family	57
CPBP	PF02517.16	gi|429216924|ref|YP_007174914.1|	-	1.1e-10	41.8	9.2	1.1e-10	41.8	9.2	2.4	1	1	1	2	2	2	1	CPBP	intramembrane	metalloprotease
Flu_M2	PF00599.17	gi|429216924|ref|YP_007174914.1|	-	0.51	10.5	2.3	0.56	10.3	0.1	2.2	2	1	0	2	2	2	0	Influenza	Matrix	protein	(M2)
GDC-P	PF02347.16	gi|429216925|ref|YP_007174915.1|	-	1.5e-08	33.9	0.0	5.8e-08	32.0	0.0	1.8	2	0	0	2	2	2	1	Glycine	cleavage	system	P-protein
Aminotran_5	PF00266.19	gi|429216925|ref|YP_007174915.1|	-	4.2e-05	22.7	0.0	7.5e-05	21.8	0.0	1.3	1	0	0	1	1	1	1	Aminotransferase	class-V
Aminotran_1_2	PF00155.21	gi|429216925|ref|YP_007174915.1|	-	0.0058	15.9	0.0	0.012	14.9	0.0	1.4	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
GDC-P	PF02347.16	gi|429216926|ref|YP_007174916.1|	-	8e-99	331.4	0.0	9.1e-99	331.2	0.0	1.0	1	0	0	1	1	1	1	Glycine	cleavage	system	P-protein
Glyco_hydro_15	PF00723.21	gi|429216927|ref|YP_007174917.1|	-	5.9e-05	22.0	0.0	0.00041	19.3	0.1	2.0	2	0	0	2	2	2	1	Glycosyl	hydrolases	family	15
Radical_SAM	PF04055.21	gi|429216928|ref|YP_007174918.1|	-	3.1e-28	99.3	0.1	1.4e-26	93.9	0.0	2.2	2	0	0	2	2	2	1	Radical	SAM	superfamily
B12-binding	PF02310.19	gi|429216928|ref|YP_007174918.1|	-	1.1e-24	86.8	0.0	2.7e-24	85.5	0.0	1.6	1	0	0	1	1	1	1	B12	binding	domain
Fer4_14	PF13394.6	gi|429216928|ref|YP_007174918.1|	-	0.001	19.2	0.1	0.0027	17.8	0.1	1.7	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.6	gi|429216928|ref|YP_007174918.1|	-	0.0021	18.4	0.1	0.0043	17.3	0.1	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Peripla_BP_6	PF13458.6	gi|429216928|ref|YP_007174918.1|	-	0.061	13.0	0.0	0.1	12.2	0.0	1.4	1	0	0	1	1	1	0	Periplasmic	binding	protein
Radical_SAM	PF04055.21	gi|429216929|ref|YP_007174919.1|	-	3.9e-25	89.1	0.1	3e-24	86.3	0.0	2.4	2	1	1	3	3	3	1	Radical	SAM	superfamily
SPASM	PF13186.6	gi|429216929|ref|YP_007174919.1|	-	1.5e-10	41.4	1.7	3.3e-10	40.3	1.7	1.6	1	0	0	1	1	1	1	Iron-sulfur	cluster-binding	domain
Fer4_12	PF13353.6	gi|429216929|ref|YP_007174919.1|	-	6.4e-09	36.2	0.0	1.7e-08	34.8	0.0	1.7	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|429216929|ref|YP_007174919.1|	-	3.1e-07	30.5	0.0	7.5e-07	29.3	0.0	1.7	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
HMGL-like	PF00682.19	gi|429216929|ref|YP_007174919.1|	-	2e-05	24.3	0.0	3.4e-05	23.5	0.0	1.2	1	0	0	1	1	1	1	HMGL-like
HTH_22	PF13309.6	gi|429216929|ref|YP_007174919.1|	-	0.065	13.3	0.0	0.21	11.7	0.0	1.8	1	0	0	1	1	1	0	HTH	domain
AP_endonuc_2	PF01261.24	gi|429216929|ref|YP_007174919.1|	-	0.11	11.9	0.0	0.25	10.8	0.0	1.7	1	0	0	1	1	1	0	Xylose	isomerase-like	TIM	barrel
vATP-synt_AC39	PF01992.16	gi|429216930|ref|YP_007174920.1|	-	2.2e-13	50.5	9.1	3.5e-13	49.8	8.8	1.5	1	1	0	1	1	1	1	ATP	synthase	(C/AC39)	subunit
F_actin_bind	PF08919.10	gi|429216931|ref|YP_007174921.1|	-	0.001	19.1	4.4	0.0013	18.8	4.4	1.1	1	0	0	1	1	1	1	F-actin	binding
Cep57_MT_bd	PF06657.13	gi|429216931|ref|YP_007174921.1|	-	0.0014	19.0	4.0	0.0014	19.0	4.0	2.1	1	1	1	2	2	2	1	Centrosome	microtubule-binding	domain	of	Cep57
Fib_alpha	PF08702.10	gi|429216931|ref|YP_007174921.1|	-	0.01	16.0	8.4	0.015	15.5	7.1	1.7	1	1	1	2	2	2	0	Fibrinogen	alpha/beta	chain	family
DUF885	PF05960.11	gi|429216931|ref|YP_007174921.1|	-	0.014	15.0	0.8	0.017	14.8	0.8	1.1	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF885)
KfrA_N	PF11740.8	gi|429216931|ref|YP_007174921.1|	-	0.017	15.8	1.8	0.025	15.3	1.8	1.3	1	0	0	1	1	1	0	Plasmid	replication	region	DNA-binding	N-term
Mer2	PF09074.10	gi|429216931|ref|YP_007174921.1|	-	0.021	14.6	9.4	0.023	14.5	9.4	1.1	1	0	0	1	1	1	0	Mer2
Z1	PF10593.9	gi|429216931|ref|YP_007174921.1|	-	0.028	13.9	4.5	0.035	13.6	4.5	1.2	1	0	0	1	1	1	0	Z1	domain
EHD_N	PF16880.5	gi|429216931|ref|YP_007174921.1|	-	0.034	14.0	2.2	0.093	12.6	2.2	1.8	1	0	0	1	1	1	0	N-terminal	EH-domain	containing	protein
MRP-S27	PF10037.9	gi|429216931|ref|YP_007174921.1|	-	0.038	12.8	13.5	0.042	12.7	13.5	1.1	1	0	0	1	1	1	0	Mitochondrial	28S	ribosomal	protein	S27
Phage_min_cap2	PF06152.11	gi|429216931|ref|YP_007174921.1|	-	0.04	12.8	5.3	0.066	12.1	5.3	1.4	1	1	0	1	1	1	0	Phage	minor	capsid	protein	2
DIT1_PvcA	PF05141.12	gi|429216931|ref|YP_007174921.1|	-	0.04	13.4	3.2	0.046	13.2	3.2	1.1	1	0	0	1	1	1	0	Pyoverdine/dityrosine	biosynthesis	protein
V-ATPase_G_2	PF16999.5	gi|429216931|ref|YP_007174921.1|	-	0.051	14.0	8.3	0.073	13.5	8.3	1.2	1	0	0	1	1	1	0	Vacuolar	(H+)-ATPase	G	subunit
PFO_beta_C	PF12367.8	gi|429216931|ref|YP_007174921.1|	-	0.063	13.4	2.2	9.9	6.4	2.2	2.6	1	1	0	1	1	1	0	Pyruvate	ferredoxin	oxidoreductase	beta	subunit	C	terminal
TMF_DNA_bd	PF12329.8	gi|429216931|ref|YP_007174921.1|	-	0.067	13.2	1.2	0.067	13.2	1.2	2.5	1	1	1	2	2	2	0	TATA	element	modulatory	factor	1	DNA	binding
TPM_phosphatase	PF04536.14	gi|429216931|ref|YP_007174921.1|	-	0.073	13.2	1.3	0.19	11.9	1.3	2.0	1	1	0	1	1	1	0	TPM	domain
Prominin	PF05478.11	gi|429216931|ref|YP_007174921.1|	-	0.079	10.9	5.6	0.092	10.7	5.6	1.1	1	0	0	1	1	1	0	Prominin
SMBP	PF16785.5	gi|429216931|ref|YP_007174921.1|	-	0.087	13.0	3.5	1.7	8.9	3.5	2.3	1	1	0	1	1	1	0	Small	metal-binding	protein
DUF883	PF05957.13	gi|429216931|ref|YP_007174921.1|	-	0.14	12.7	4.4	0.4	11.3	4.4	1.8	1	1	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF883)
DASH_Dad4	PF08650.10	gi|429216931|ref|YP_007174921.1|	-	0.14	12.1	4.8	2	8.4	0.2	2.5	1	1	2	3	3	3	0	DASH	complex	subunit	Dad4
14-3-3	PF00244.20	gi|429216931|ref|YP_007174921.1|	-	0.17	11.4	9.5	0.23	11.0	9.5	1.3	1	1	0	1	1	1	0	14-3-3	protein
Wx5_PLAF3D7	PF09688.10	gi|429216931|ref|YP_007174921.1|	-	0.19	11.7	8.7	0.34	10.9	8.7	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(Wx5_PLAF3D7)
AAA_13	PF13166.6	gi|429216931|ref|YP_007174921.1|	-	0.25	9.9	11.7	0.26	9.9	11.7	1.0	1	0	0	1	1	1	0	AAA	domain
OmpH	PF03938.14	gi|429216931|ref|YP_007174921.1|	-	0.31	11.4	12.0	0.4	11.0	12.0	1.2	1	0	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
CPSase_L_D3	PF02787.19	gi|429216931|ref|YP_007174921.1|	-	0.32	11.3	4.9	0.52	10.7	4.9	1.5	1	1	0	1	1	1	0	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
FapA	PF03961.13	gi|429216931|ref|YP_007174921.1|	-	0.33	9.5	12.7	0.38	9.3	12.7	1.0	1	0	0	1	1	1	0	Flagellar	Assembly	Protein	A
Lipoprotein_2	PF00921.17	gi|429216931|ref|YP_007174921.1|	-	0.36	10.3	13.1	0.43	10.1	13.1	1.0	1	0	0	1	1	1	0	Borrelia	lipoprotein
Syntaxin_2	PF14523.6	gi|429216931|ref|YP_007174921.1|	-	0.41	11.0	9.3	1.2	9.5	9.3	1.8	1	1	0	1	1	1	0	Syntaxin-like	protein
V_ATPase_I	PF01496.19	gi|429216931|ref|YP_007174921.1|	-	0.5	8.2	9.1	0.53	8.1	9.1	1.0	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
PEP-utilisers_N	PF05524.13	gi|429216931|ref|YP_007174921.1|	-	0.53	10.5	6.4	26	5.0	6.4	2.8	1	1	0	1	1	1	0	PEP-utilising	enzyme,	N-terminal
DUF763	PF05559.11	gi|429216931|ref|YP_007174921.1|	-	0.57	9.3	3.4	0.63	9.2	3.4	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF763)
Ribosomal_S20p	PF01649.18	gi|429216931|ref|YP_007174921.1|	-	0.61	10.8	9.6	0.48	11.1	7.7	1.8	1	1	1	2	2	2	0	Ribosomal	protein	S20
Exonuc_VII_L	PF02601.15	gi|429216931|ref|YP_007174921.1|	-	0.9	9.1	5.1	1.1	8.8	5.1	1.1	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
HSCB_C	PF07743.13	gi|429216931|ref|YP_007174921.1|	-	1.1	9.9	11.1	35	5.0	11.1	2.6	1	1	0	1	1	1	0	HSCB	C-terminal	oligomerisation	domain
Swi5	PF07061.11	gi|429216931|ref|YP_007174921.1|	-	1.5	9.0	15.2	4.6	7.4	3.4	2.3	1	1	1	2	2	2	0	Swi5
YabA	PF06156.13	gi|429216931|ref|YP_007174921.1|	-	2.2	8.9	10.3	17	6.1	10.0	2.0	1	1	0	1	1	1	0	Initiation	control	protein	YabA
HSP70	PF00012.20	gi|429216931|ref|YP_007174921.1|	-	2.3	6.3	10.8	2.4	6.3	10.8	1.2	1	0	0	1	1	1	0	Hsp70	protein
DUF1002	PF06207.11	gi|429216931|ref|YP_007174921.1|	-	2.6	7.5	10.3	2.9	7.4	3.8	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1002)
YtxH	PF12732.7	gi|429216931|ref|YP_007174921.1|	-	4.2	8.0	12.1	73	4.0	12.1	2.4	1	1	0	1	1	1	0	YtxH-like	protein
CENP-H	PF05837.12	gi|429216931|ref|YP_007174921.1|	-	6.1	7.3	15.1	1.9	8.9	9.9	1.9	1	1	1	2	2	2	0	Centromere	protein	H	(CENP-H)
TMPIT	PF07851.13	gi|429216931|ref|YP_007174921.1|	-	8.9	5.5	11.6	15	4.7	11.6	1.4	1	1	0	1	1	1	0	TMPIT-like	protein
UPRTase	PF14681.6	gi|429216932|ref|YP_007174922.1|	-	1.7e-40	138.7	0.0	2.1e-40	138.4	0.0	1.0	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
Pribosyltran	PF00156.27	gi|429216932|ref|YP_007174922.1|	-	2.6e-08	33.6	0.0	4.9e-08	32.6	0.0	1.5	1	1	0	1	1	1	1	Phosphoribosyl	transferase	domain
Ribosomal_S13_N	PF08069.12	gi|429216933|ref|YP_007174923.1|	-	1.5e-20	72.9	0.0	2.5e-20	72.3	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	S13/S15	N-terminal	domain
Ribosomal_S15	PF00312.22	gi|429216933|ref|YP_007174923.1|	-	1.1e-14	54.4	0.1	1.6e-14	53.9	0.1	1.3	1	0	0	1	1	1	1	Ribosomal	protein	S15
YflT	PF11181.8	gi|429216933|ref|YP_007174923.1|	-	0.14	12.7	0.0	0.23	12.0	0.0	1.6	1	1	0	1	1	1	0	Heat	induced	stress	protein	YflT
CLP1_P	PF16575.5	gi|429216934|ref|YP_007174924.1|	-	1.6e-25	90.0	0.0	2.6e-25	89.3	0.0	1.3	1	0	0	1	1	1	1	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
CodY	PF06018.14	gi|429216934|ref|YP_007174924.1|	-	0.00028	20.4	0.2	0.00071	19.1	0.2	1.6	1	0	0	1	1	1	1	CodY	GAF-like	domain
T2SSE	PF00437.20	gi|429216934|ref|YP_007174924.1|	-	0.00091	18.4	0.0	0.0015	17.6	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
MMR_HSR1	PF01926.23	gi|429216934|ref|YP_007174924.1|	-	0.0038	17.3	1.1	0.055	13.6	1.1	2.3	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
DUF4030	PF13222.6	gi|429216934|ref|YP_007174924.1|	-	0.0049	17.0	0.4	0.0049	17.0	0.4	2.3	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF4030)
AAA_29	PF13555.6	gi|429216934|ref|YP_007174924.1|	-	0.011	15.4	0.0	0.031	14.0	0.0	1.7	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_24	PF13479.6	gi|429216934|ref|YP_007174924.1|	-	0.012	15.3	0.0	0.021	14.5	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Polyoma_lg_T_C	PF06431.11	gi|429216934|ref|YP_007174924.1|	-	0.016	14.1	0.0	0.024	13.5	0.0	1.2	1	0	0	1	1	1	0	Polyomavirus	large	T	antigen	C-terminus
DUF87	PF01935.17	gi|429216934|ref|YP_007174924.1|	-	0.018	15.2	2.2	0.047	13.8	0.0	2.2	2	0	0	2	2	2	0	Helicase	HerA,	central	domain
ABC_tran	PF00005.27	gi|429216934|ref|YP_007174924.1|	-	0.019	15.5	0.0	0.047	14.2	0.0	1.7	1	0	0	1	1	1	0	ABC	transporter
AAA_22	PF13401.6	gi|429216934|ref|YP_007174924.1|	-	0.02	15.1	0.0	0.043	14.1	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
GTP_EFTU	PF00009.27	gi|429216934|ref|YP_007174924.1|	-	0.045	13.3	0.0	0.091	12.3	0.0	1.5	1	0	0	1	1	1	0	Elongation	factor	Tu	GTP	binding	domain
RsgA_GTPase	PF03193.16	gi|429216934|ref|YP_007174924.1|	-	0.047	13.6	0.0	0.12	12.3	0.0	1.8	1	1	0	1	1	1	0	RsgA	GTPase
Roc	PF08477.13	gi|429216934|ref|YP_007174924.1|	-	0.1	12.8	0.0	0.63	10.3	0.0	2.2	2	0	0	2	2	2	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
ResIII	PF04851.15	gi|429216934|ref|YP_007174924.1|	-	0.21	11.6	3.1	0.25	11.3	0.0	2.3	2	1	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
AAA_23	PF13476.6	gi|429216934|ref|YP_007174924.1|	-	1.1	9.8	12.4	2.7	8.5	11.6	2.0	1	1	0	1	1	1	0	AAA	domain
TrmB	PF01978.19	gi|429216935|ref|YP_007174925.1|	-	5.5e-05	23.0	0.0	0.00012	21.9	0.0	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.10	gi|429216935|ref|YP_007174925.1|	-	0.00046	19.9	0.0	0.0018	18.1	0.0	1.8	2	0	0	2	2	2	1	IclR	helix-turn-helix	domain
MarR_2	PF12802.7	gi|429216935|ref|YP_007174925.1|	-	0.0078	16.1	0.0	0.0084	16.0	0.0	1.3	1	1	0	1	1	1	1	MarR	family
HTH_24	PF13412.6	gi|429216935|ref|YP_007174925.1|	-	0.013	15.0	0.0	0.032	13.8	0.0	1.7	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
HTH_20	PF12840.7	gi|429216935|ref|YP_007174925.1|	-	0.073	13.2	0.0	0.13	12.4	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
Colicin_E5	PF12106.8	gi|429216936|ref|YP_007174926.1|	-	0.018	15.3	0.0	0.032	14.5	0.0	1.4	1	0	0	1	1	1	0	Colicin	E5	ribonuclease	domain
PyocinActivator	PF11112.8	gi|429216936|ref|YP_007174926.1|	-	0.1	12.7	0.0	0.88	9.7	0.0	2.2	2	0	0	2	2	2	0	Pyocin	activator	protein	PrtN
UDG	PF03167.19	gi|429216937|ref|YP_007174927.1|	-	4.7e-43	146.8	0.0	5.9e-43	146.5	0.0	1.1	1	0	0	1	1	1	1	Uracil	DNA	glycosylase	superfamily
Cupin_2	PF07883.11	gi|429216938|ref|YP_007174928.1|	-	3.4e-15	55.5	0.2	4.7e-15	55.1	0.2	1.2	1	0	0	1	1	1	1	Cupin	domain
AraC_binding	PF02311.19	gi|429216938|ref|YP_007174928.1|	-	1.5e-10	41.1	0.1	2e-10	40.7	0.1	1.2	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
Cupin_7	PF12973.7	gi|429216938|ref|YP_007174928.1|	-	1.3e-05	25.1	0.0	1.7e-05	24.6	0.0	1.2	1	0	0	1	1	1	1	ChrR	Cupin-like	domain
MannoseP_isomer	PF01050.18	gi|429216938|ref|YP_007174928.1|	-	2.5e-05	24.2	0.0	2.9e-05	24.0	0.0	1.1	1	0	0	1	1	1	1	Mannose-6-phosphate	isomerase
Ectoine_synth	PF06339.12	gi|429216938|ref|YP_007174928.1|	-	0.0002	21.5	0.0	0.00025	21.2	0.0	1.1	1	0	0	1	1	1	1	Ectoine	synthase
Asp_Arg_Hydrox	PF05118.15	gi|429216938|ref|YP_007174928.1|	-	0.00037	20.4	0.0	0.00067	19.5	0.0	1.5	1	1	0	1	1	1	1	Aspartyl/Asparaginyl	beta-hydroxylase
Cupin_1	PF00190.22	gi|429216938|ref|YP_007174928.1|	-	0.002	17.7	0.0	0.0035	17.0	0.0	1.5	1	1	0	1	1	1	1	Cupin
Cupin_3	PF05899.12	gi|429216938|ref|YP_007174928.1|	-	0.0027	17.4	0.0	0.0037	16.9	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF861)
EutQ	PF06249.12	gi|429216938|ref|YP_007174928.1|	-	0.012	15.3	0.0	0.02	14.7	0.0	1.3	1	1	0	1	1	1	0	Ethanolamine	utilisation	protein	EutQ
ARD	PF03079.14	gi|429216938|ref|YP_007174928.1|	-	0.16	12.2	0.6	0.33	11.1	0.1	1.8	1	1	1	2	2	2	0	ARD/ARD'	family
Pirin_C	PF05726.13	gi|429216938|ref|YP_007174928.1|	-	0.16	12.3	0.0	0.21	12.0	0.0	1.2	1	0	0	1	1	1	0	Pirin	C-terminal	cupin	domain
Lon_C	PF05362.13	gi|429216939|ref|YP_007174929.1|	-	0.0069	15.9	0.0	0.012	15.1	0.0	1.3	1	0	0	1	1	1	1	Lon	protease	(S16)	C-terminal	proteolytic	domain
DUF2452	PF10504.9	gi|429216940|ref|YP_007174930.1|	-	0.16	11.4	1.9	6.9	6.1	1.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2452)
HTH_3	PF01381.22	gi|429216941|ref|YP_007174931.1|	-	2.1e-05	24.4	0.1	0.00023	21.2	0.0	2.3	1	1	1	2	2	2	1	Helix-turn-helix
HTH_5	PF01022.20	gi|429216941|ref|YP_007174931.1|	-	0.00029	20.6	0.0	0.00061	19.6	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
YdaS_antitoxin	PF15943.5	gi|429216941|ref|YP_007174931.1|	-	0.004	17.0	0.0	0.0074	16.1	0.0	1.6	1	1	0	1	1	1	1	Putative	antitoxin	of	bacterial	toxin-antitoxin	system,	YdaS/YdaT
HTH_20	PF12840.7	gi|429216941|ref|YP_007174931.1|	-	0.0074	16.3	0.0	0.017	15.2	0.0	1.7	1	1	0	1	1	1	1	Helix-turn-helix	domain
HTH_IclR	PF09339.10	gi|429216941|ref|YP_007174931.1|	-	0.01	15.6	0.0	0.025	14.4	0.0	1.6	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_11	PF08279.12	gi|429216941|ref|YP_007174931.1|	-	0.011	15.7	0.0	0.028	14.4	0.0	1.7	1	0	0	1	1	1	0	HTH	domain
HTH_24	PF13412.6	gi|429216941|ref|YP_007174931.1|	-	0.014	15.0	0.2	0.066	12.8	0.2	2.2	1	1	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
HTH_19	PF12844.7	gi|429216941|ref|YP_007174931.1|	-	0.02	14.9	0.1	0.076	13.0	0.0	2.1	1	1	1	2	2	2	0	Helix-turn-helix	domain
HTH_10	PF04967.12	gi|429216941|ref|YP_007174931.1|	-	0.056	13.3	0.0	0.18	11.6	0.0	1.9	2	0	0	2	2	2	0	HTH	DNA	binding	domain
HTH_28	PF13518.6	gi|429216941|ref|YP_007174931.1|	-	0.067	13.3	0.0	0.14	12.3	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
P22_Cro	PF14549.6	gi|429216941|ref|YP_007174931.1|	-	0.084	12.7	0.0	0.14	12.0	0.0	1.4	1	0	0	1	1	1	0	DNA-binding	transcriptional	regulator	Cro
DUF742	PF05331.11	gi|429216941|ref|YP_007174931.1|	-	0.089	12.6	0.0	0.12	12.2	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF742)
MarR_2	PF12802.7	gi|429216941|ref|YP_007174931.1|	-	0.12	12.2	0.0	0.32	10.9	0.0	1.7	1	0	0	1	1	1	0	MarR	family
Gp_dh_C	PF02800.20	gi|429216942|ref|YP_007174932.1|	-	8.2e-20	71.0	0.6	1.2e-19	70.4	0.6	1.3	1	0	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
DapB_N	PF01113.20	gi|429216942|ref|YP_007174932.1|	-	2.2e-11	44.0	0.6	7.1e-11	42.3	0.4	1.9	1	1	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
Gp_dh_N	PF00044.24	gi|429216942|ref|YP_007174932.1|	-	1.5e-05	25.3	3.5	3.2e-05	24.2	0.5	2.8	3	2	0	3	3	3	1	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.19	gi|429216942|ref|YP_007174932.1|	-	3.9e-05	23.1	2.3	0.0082	15.5	0.0	2.7	2	1	1	3	3	3	2	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
GFO_IDH_MocA	PF01408.22	gi|429216942|ref|YP_007174932.1|	-	0.00029	21.6	0.1	0.0041	17.9	0.0	2.7	2	1	0	2	2	2	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
IlvN	PF07991.12	gi|429216942|ref|YP_007174932.1|	-	0.011	15.3	0.5	0.49	10.0	0.5	2.5	1	1	0	1	1	1	0	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
NAD_binding_2	PF03446.15	gi|429216942|ref|YP_007174932.1|	-	0.087	13.0	0.3	0.82	9.8	0.0	2.5	3	0	0	3	3	3	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
AdoHcyase_NAD	PF00670.21	gi|429216942|ref|YP_007174932.1|	-	0.1	12.7	1.0	1.2	9.2	0.2	2.4	1	1	1	2	2	2	0	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
PGK	PF00162.19	gi|429216943|ref|YP_007174933.1|	-	3.1e-105	352.2	0.1	3.5e-105	352.1	0.1	1.0	1	0	0	1	1	1	1	Phosphoglycerate	kinase
Lactamase_B_3	PF13483.6	gi|429216944|ref|YP_007174934.1|	-	2.9e-31	108.6	0.1	3.6e-31	108.3	0.1	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.7	gi|429216944|ref|YP_007174934.1|	-	1.2e-10	41.3	0.1	3.8e-07	29.8	0.0	2.1	1	1	1	2	2	2	2	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|429216944|ref|YP_007174934.1|	-	0.029	14.4	0.1	0.13	12.3	0.1	1.9	2	0	0	2	2	2	0	Metallo-beta-lactamase	superfamily
KH_8	PF17903.1	gi|429216945|ref|YP_007174935.1|	-	3.7e-05	23.7	0.3	6.5e-05	22.9	0.3	1.4	1	0	0	1	1	1	1	Krr1	KH1	domain
KH_1	PF00013.29	gi|429216945|ref|YP_007174935.1|	-	0.002	17.9	7.9	0.0029	17.4	3.2	2.6	2	1	0	2	2	2	1	KH	domain
Phe_tRNA-synt_N	PF02912.18	gi|429216945|ref|YP_007174935.1|	-	0.015	15.3	0.2	0.043	13.8	0.0	1.9	2	0	0	2	2	2	0	Aminoacyl	tRNA	synthetase	class	II,	N-terminal	domain
Stn1_C	PF12659.7	gi|429216945|ref|YP_007174935.1|	-	0.045	13.7	0.3	0.075	13.0	0.3	1.5	1	0	0	1	1	1	0	Telomere	capping	C-terminal	wHTH
TBCC_N	PF16752.5	gi|429216945|ref|YP_007174935.1|	-	0.068	13.6	0.0	0.12	12.8	0.0	1.4	1	0	0	1	1	1	0	Tubulin-specific	chaperone	C	N-terminal	domain
RIO1	PF01163.22	gi|429216946|ref|YP_007174936.1|	-	5e-59	199.1	0.7	7.4e-59	198.5	0.7	1.2	1	0	0	1	1	1	1	RIO1	family
Kdo	PF06293.14	gi|429216946|ref|YP_007174936.1|	-	0.041	13.2	0.0	0.27	10.6	0.0	2.0	1	1	0	1	1	1	0	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
Plasmod_dom_1	PF09715.10	gi|429216946|ref|YP_007174936.1|	-	0.068	13.2	0.2	0.24	11.5	0.2	2.0	1	0	0	1	1	1	0	Plasmodium	protein	of	unknown	function	(Plasmod_dom_1)
eIF-1a	PF01176.19	gi|429216947|ref|YP_007174937.1|	-	6.8e-16	57.8	0.1	9.3e-16	57.4	0.1	1.2	1	0	0	1	1	1	1	Translation	initiation	factor	1A	/	IF-1
Nramp	PF01566.18	gi|429216948|ref|YP_007174938.1|	-	1.9e-39	135.7	19.7	2.6e-39	135.2	19.7	1.1	1	0	0	1	1	1	1	Natural	resistance-associated	macrophage	protein
DUF3493	PF11998.8	gi|429216948|ref|YP_007174938.1|	-	1.3	9.2	6.6	8.3	6.7	0.1	3.7	4	0	0	4	4	4	0	Low	psii	accumulation1	/	Rep27
Thymidylate_kin	PF02223.17	gi|429216949|ref|YP_007174939.1|	-	1.2e-39	135.9	0.1	1.4e-39	135.7	0.1	1.1	1	0	0	1	1	1	1	Thymidylate	kinase
dNK	PF01712.19	gi|429216949|ref|YP_007174939.1|	-	1.4e-06	28.3	4.3	5.9e-06	26.3	2.1	2.1	2	0	0	2	2	2	1	Deoxynucleoside	kinase
AAA_18	PF13238.6	gi|429216949|ref|YP_007174939.1|	-	0.00042	20.8	0.6	0.002	18.7	0.1	2.3	1	1	1	2	2	2	1	AAA	domain
Ploopntkinase1	PF18748.1	gi|429216949|ref|YP_007174939.1|	-	0.0059	16.2	0.0	0.01	15.3	0.0	1.4	1	0	0	1	1	1	1	P-loop	Nucleotide	Kinase1
SKI	PF01202.22	gi|429216949|ref|YP_007174939.1|	-	0.014	15.5	0.1	0.028	14.5	0.1	1.4	1	0	0	1	1	1	0	Shikimate	kinase
SpoU_sub_bind	PF08032.12	gi|429216949|ref|YP_007174939.1|	-	0.23	11.8	2.0	3	8.2	0.1	2.9	2	1	1	3	3	3	0	RNA	2'-O	ribose	methyltransferase	substrate	binding
Phage_holin_3_6	PF07332.11	gi|429216950|ref|YP_007174940.1|	-	0.00072	19.6	0.2	0.00091	19.2	0.2	1.2	1	0	0	1	1	1	1	Putative	Actinobacterial	Holin-X,	holin	superfamily	III
Wzy_C	PF04932.15	gi|429216950|ref|YP_007174940.1|	-	0.0021	17.7	0.1	0.0025	17.5	0.1	1.0	1	0	0	1	1	1	1	O-Antigen	ligase
MFS_2	PF13347.6	gi|429216950|ref|YP_007174940.1|	-	0.01	14.5	1.1	0.012	14.2	1.1	1.1	1	0	0	1	1	1	0	MFS/sugar	transport	protein
PIG-P	PF08510.12	gi|429216950|ref|YP_007174940.1|	-	0.027	14.4	1.2	0.22	11.4	1.2	1.9	1	1	0	1	1	1	0	PIG-P
DUF2254	PF10011.9	gi|429216950|ref|YP_007174940.1|	-	0.046	12.5	0.6	0.12	11.2	0.5	1.7	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2254)
DUF4131	PF13567.6	gi|429216950|ref|YP_007174940.1|	-	0.075	12.7	0.0	0.085	12.5	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
DUF4574	PF15141.6	gi|429216950|ref|YP_007174940.1|	-	0.1	12.5	0.3	0.2	11.6	0.0	1.6	2	0	0	2	2	2	0	Ubiquinol-cytochrome-c	reductase	complex	assembly	factor	3
DUF973	PF06157.11	gi|429216950|ref|YP_007174940.1|	-	0.96	8.4	5.6	1.2	8.1	5.6	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF973)
TMEM43	PF07787.12	gi|429216950|ref|YP_007174940.1|	-	4.5	6.6	7.2	6.8	6.0	7.2	1.2	1	0	0	1	1	1	0	Transmembrane	protein	43
Thioredoxin_2	PF13098.6	gi|429216951|ref|YP_007174941.1|	-	9.9e-07	29.2	0.7	0.00011	22.6	0.7	2.4	1	1	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin_4	PF13462.6	gi|429216951|ref|YP_007174941.1|	-	0.025	14.8	0.1	0.073	13.2	0.1	1.7	1	1	0	1	1	1	0	Thioredoxin
TraF	PF13728.6	gi|429216951|ref|YP_007174941.1|	-	0.032	14.1	0.5	2.3	8.0	0.0	2.8	2	1	1	3	3	3	0	F	plasmid	transfer	operon	protein
NAD_binding_2	PF03446.15	gi|429216953|ref|YP_007174943.1|	-	9.8e-24	84.3	0.0	1.7e-23	83.5	0.0	1.3	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_binding_11	PF14833.6	gi|429216953|ref|YP_007174943.1|	-	2.2e-14	53.7	0.0	8.2e-14	51.9	0.0	1.8	2	0	0	2	2	2	1	NAD-binding	of	NADP-dependent	3-hydroxyisobutyrate	dehydrogenase
F420_oxidored	PF03807.17	gi|429216953|ref|YP_007174943.1|	-	9e-11	42.2	0.0	2.2e-10	41.0	0.0	1.7	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
Shikimate_DH	PF01488.20	gi|429216953|ref|YP_007174943.1|	-	4.9e-09	36.4	0.0	1e-08	35.3	0.0	1.5	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
3HCDH_N	PF02737.18	gi|429216953|ref|YP_007174943.1|	-	4e-06	26.8	0.4	2.1e-05	24.5	0.0	2.2	2	1	1	3	3	3	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_Gly3P_dh_N	PF01210.23	gi|429216953|ref|YP_007174943.1|	-	8.7e-06	25.8	0.0	1.6e-05	25.0	0.0	1.5	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
IlvN	PF07991.12	gi|429216953|ref|YP_007174943.1|	-	9.4e-06	25.3	0.0	1.9e-05	24.3	0.0	1.5	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
2-Hacid_dh_C	PF02826.19	gi|429216953|ref|YP_007174943.1|	-	1e-05	25.0	0.0	3.3e-05	23.3	0.0	1.7	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
ApbA	PF02558.16	gi|429216953|ref|YP_007174943.1|	-	0.00087	19.0	0.0	0.0014	18.3	0.0	1.4	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
adh_short	PF00106.25	gi|429216953|ref|YP_007174943.1|	-	0.0038	16.7	0.0	0.0068	15.9	0.0	1.4	1	0	0	1	1	1	1	short	chain	dehydrogenase
UDPG_MGDP_dh_N	PF03721.14	gi|429216953|ref|YP_007174943.1|	-	0.0041	16.7	0.1	0.76	9.3	0.0	2.6	2	1	1	3	3	3	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Sacchrp_dh_NADP	PF03435.18	gi|429216953|ref|YP_007174943.1|	-	0.005	17.1	0.0	0.012	15.9	0.0	1.7	2	0	0	2	2	2	1	Saccharopine	dehydrogenase	NADP	binding	domain
TrkA_N	PF02254.18	gi|429216953|ref|YP_007174943.1|	-	0.015	15.5	0.1	0.14	12.4	0.1	2.3	1	1	0	1	1	1	0	TrkA-N	domain
UDPG_MGDP_dh	PF00984.19	gi|429216953|ref|YP_007174943.1|	-	0.057	13.6	0.2	0.19	12.0	0.1	1.9	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	central	domain
NAD_binding_7	PF13241.6	gi|429216953|ref|YP_007174943.1|	-	0.12	12.9	0.0	0.24	11.9	0.0	1.5	1	0	0	1	1	1	0	Putative	NAD(P)-binding
ThiF	PF00899.21	gi|429216953|ref|YP_007174943.1|	-	0.2	11.0	0.3	0.72	9.2	0.1	1.9	1	1	1	2	2	2	0	ThiF	family
NMD3	PF04981.13	gi|429216954|ref|YP_007174944.1|	-	1e-44	152.8	0.3	1.2e-44	152.7	0.3	1.0	1	0	0	1	1	1	1	NMD3	family
Zn-ribbon_8	PF09723.10	gi|429216954|ref|YP_007174944.1|	-	0.003	17.6	4.2	7.5	6.8	0.0	3.3	3	0	0	3	3	3	1	Zinc	ribbon	domain
IreB	PF06135.12	gi|429216954|ref|YP_007174944.1|	-	0.0056	16.9	1.3	0.046	13.9	0.1	2.6	2	1	0	2	2	2	1	IreB	regulatory	phosphoprotein
MqsA_antitoxin	PF15731.5	gi|429216954|ref|YP_007174944.1|	-	0.029	14.5	0.2	0.066	13.3	0.2	1.7	1	0	0	1	1	1	0	Antitoxin	component	of	bacterial	toxin-antitoxin	system,	MqsA
zf-Di19	PF05605.12	gi|429216954|ref|YP_007174944.1|	-	0.043	14.1	2.1	7.9	6.9	0.0	2.7	3	0	0	3	3	3	0	Drought	induced	19	protein	(Di19),	zinc-binding
zinc-ribbons_6	PF07191.12	gi|429216954|ref|YP_007174944.1|	-	0.067	13.2	1.8	0.18	11.8	0.5	2.0	2	0	0	2	2	2	0	zinc-ribbons
Rad50_zn_hook	PF04423.14	gi|429216954|ref|YP_007174944.1|	-	0.13	12.1	1.7	1.5	8.7	0.2	2.6	2	0	0	2	2	2	0	Rad50	zinc	hook	motif
Zn-C2H2_12	PF18112.1	gi|429216954|ref|YP_007174944.1|	-	0.14	12.6	4.0	4.3	7.9	0.1	2.7	2	0	0	2	2	2	0	Autophagy	receptor	zinc	finger-C2H2	domain
DUF2256	PF10013.9	gi|429216954|ref|YP_007174944.1|	-	0.4	10.9	0.2	0.4	10.9	0.2	2.5	3	0	0	3	3	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2256)
zf-ribbon_3	PF13248.6	gi|429216954|ref|YP_007174944.1|	-	0.48	9.9	10.0	4	7.0	1.8	3.4	3	1	0	3	3	3	0	zinc-ribbon	domain
Spt4	PF06093.13	gi|429216954|ref|YP_007174944.1|	-	0.72	10.0	4.6	2.3	8.4	0.9	2.6	2	1	0	2	2	2	0	Spt4/RpoE2	zinc	finger
Rpr2	PF04032.16	gi|429216954|ref|YP_007174944.1|	-	1.7	9.0	3.9	33	4.9	0.0	2.9	3	1	0	3	3	2	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
zf-RRN7	PF11781.8	gi|429216954|ref|YP_007174944.1|	-	2.8	7.7	8.1	3.9	7.2	0.2	3.3	3	0	0	3	3	3	0	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
DZR	PF12773.7	gi|429216954|ref|YP_007174944.1|	-	4.7	7.3	8.1	11	6.2	2.0	3.0	2	1	0	3	3	3	0	Double	zinc	ribbon
FdhE	PF04216.12	gi|429216954|ref|YP_007174944.1|	-	9.1	6.1	5.2	28	4.5	0.0	2.8	2	1	1	3	3	3	0	Protein	involved	in	formate	dehydrogenase	formation
DNA_pol_B	PF00136.21	gi|429216955|ref|YP_007174945.1|	-	7.3e-69	232.6	0.0	1e-68	232.2	0.0	1.2	1	0	0	1	1	1	1	DNA	polymerase	family	B
DNA_pol_B_exo1	PF03104.19	gi|429216955|ref|YP_007174945.1|	-	1e-39	136.6	9.5	9.6e-38	130.2	9.5	2.5	1	1	0	1	1	1	1	DNA	polymerase	family	B,	exonuclease	domain
DNA_pol_B_exo2	PF10108.9	gi|429216955|ref|YP_007174945.1|	-	1.3e-06	28.2	0.1	2.4e-06	27.4	0.1	1.3	1	0	0	1	1	1	1	Predicted	3'-5'	exonuclease	related	to	the	exonuclease	domain	of	PolB
RNase_H_2	PF13482.6	gi|429216955|ref|YP_007174945.1|	-	6.1e-06	26.3	0.2	1.4e-05	25.2	0.2	1.6	1	0	0	1	1	1	1	RNase_H	superfamily
HHH_4	PF14490.6	gi|429216955|ref|YP_007174945.1|	-	0.0073	16.3	0.0	0.023	14.7	0.0	1.8	1	0	0	1	1	1	1	Helix-hairpin-helix	containing	domain
Exonuc_VII_S	PF02609.16	gi|429216955|ref|YP_007174945.1|	-	0.14	12.2	0.4	1.3	9.1	0.1	2.4	2	0	0	2	2	2	0	Exonuclease	VII	small	subunit
Toprim_4	PF13662.6	gi|429216956|ref|YP_007174946.1|	-	3.4e-09	37.1	0.2	1.4e-08	35.1	0.2	2.1	1	0	0	1	1	1	1	Toprim	domain
Toprim_2	PF13155.6	gi|429216956|ref|YP_007174946.1|	-	4.1e-06	27.1	0.1	2.7e-05	24.5	0.0	2.3	1	1	1	2	2	2	1	Toprim-like
Toprim	PF01751.22	gi|429216956|ref|YP_007174946.1|	-	0.00017	21.7	3.0	0.00021	21.5	0.2	2.6	3	0	0	3	3	3	1	Toprim	domain
DNA_ligase_OB_2	PF14743.6	gi|429216956|ref|YP_007174946.1|	-	0.072	13.1	0.0	0.19	11.8	0.0	1.7	1	0	0	1	1	1	0	DNA	ligase	OB-like	domain
DUF885	PF05960.11	gi|429216956|ref|YP_007174946.1|	-	0.087	12.5	0.1	0.087	12.5	0.1	1.8	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF885)
tRNA-synt_1b	PF00579.25	gi|429216957|ref|YP_007174947.1|	-	1.8e-51	175.2	1.5	1.9e-49	168.6	1.5	2.1	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(W	and	Y)
SRI	PF08236.11	gi|429216957|ref|YP_007174947.1|	-	0.77	10.0	0.0	0.77	10.0	0.0	2.9	3	0	0	3	3	3	0	SRI	(Set2	Rpb1	interacting)	domain
UbiD	PF01977.16	gi|429216958|ref|YP_007174948.1|	-	6.6e-73	245.9	0.0	8.2e-73	245.6	0.0	1.0	1	0	0	1	1	1	1	3-octaprenyl-4-hydroxybenzoate	carboxy-lyase
DUF460	PF04312.13	gi|429216959|ref|YP_007174949.1|	-	0.0038	16.9	0.1	0.0087	15.8	0.1	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF460)
ROK	PF00480.20	gi|429216960|ref|YP_007174950.1|	-	8e-55	186.4	0.0	9.8e-55	186.1	0.0	1.0	1	0	0	1	1	1	1	ROK	family
Hydant_A_N	PF05378.13	gi|429216960|ref|YP_007174950.1|	-	0.015	15.0	0.0	0.026	14.2	0.0	1.3	1	0	0	1	1	1	0	Hydantoinase/oxoprolinase	N-terminal	region
Hexokinase_1	PF00349.21	gi|429216960|ref|YP_007174950.1|	-	0.15	11.9	0.0	0.27	11.1	0.0	1.3	1	0	0	1	1	1	0	Hexokinase
Pan_kinase	PF03309.14	gi|429216960|ref|YP_007174950.1|	-	0.17	11.6	0.0	0.26	11.1	0.0	1.2	1	0	0	1	1	1	0	Type	III	pantothenate	kinase
AMP-binding	PF00501.28	gi|429216961|ref|YP_007174951.1|	-	1.2e-80	271.2	0.0	1.6e-80	270.8	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.6	gi|429216961|ref|YP_007174951.1|	-	3.1e-28	98.5	0.5	7.9e-28	97.3	0.5	1.7	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
ACAS_N	PF16177.5	gi|429216961|ref|YP_007174951.1|	-	4e-09	36.3	3.6	4e-09	36.3	3.6	2.7	4	0	0	4	4	4	1	Acetyl-coenzyme	A	synthetase	N-terminus
TrmO	PF01980.16	gi|429216962|ref|YP_007174952.1|	-	6e-20	71.6	0.0	8.3e-20	71.2	0.0	1.1	1	0	0	1	1	1	1	tRNA-methyltransferase	O
NfeD	PF01957.18	gi|429216964|ref|YP_007174954.1|	-	5.1e-16	58.8	0.3	5.1e-16	58.8	0.3	1.8	2	0	0	2	2	2	1	NfeD-like	C-terminal,	partner-binding
Peptidase_M48_N	PF16491.5	gi|429216964|ref|YP_007174954.1|	-	0.068	13.1	4.4	0.093	12.6	4.4	1.1	1	0	0	1	1	1	0	CAAX	prenyl	protease	N-terminal,	five	membrane	helices
7TMR-DISM_7TM	PF07695.11	gi|429216964|ref|YP_007174954.1|	-	0.1	12.5	10.5	0.13	12.2	10.5	1.1	1	0	0	1	1	1	0	7TM	diverse	intracellular	signalling
DUF2207	PF09972.9	gi|429216964|ref|YP_007174954.1|	-	0.42	9.3	7.6	0.51	9.0	7.6	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
Fun_ATP-synt_8	PF05933.13	gi|429216964|ref|YP_007174954.1|	-	3.1	8.0	11.2	0.41	10.8	2.3	2.3	2	0	0	2	2	2	0	Fungal	ATP	synthase	protein	8	(A6L)
FeoB_associated	PF12669.7	gi|429216964|ref|YP_007174954.1|	-	3.9	7.9	10.9	0.45	10.9	2.5	2.2	2	0	0	2	2	2	0	FeoB-associated	Cys-rich	membrane	protein
EMP70	PF02990.16	gi|429216964|ref|YP_007174954.1|	-	6.1	5.4	9.2	8	5.0	9.2	1.1	1	0	0	1	1	1	0	Endomembrane	protein	70
NfeD	PF01957.18	gi|429216965|ref|YP_007174955.1|	-	3e-17	62.8	0.4	3e-17	62.8	0.4	2.1	2	0	0	2	2	2	1	NfeD-like	C-terminal,	partner-binding
CLP_protease	PF00574.23	gi|429216965|ref|YP_007174955.1|	-	3.3e-05	23.9	2.4	0.00011	22.1	2.3	1.9	1	1	0	1	1	1	1	Clp	protease
SDH_sah	PF01972.16	gi|429216965|ref|YP_007174955.1|	-	8.5e-05	21.7	0.2	0.00012	21.2	0.2	1.2	1	0	0	1	1	1	1	Serine	dehydrogenase	proteinase
Peptidase_S49	PF01343.18	gi|429216965|ref|YP_007174955.1|	-	0.42	10.6	1.7	0.69	9.8	0.2	2.2	3	0	0	3	3	3	0	Peptidase	family	S49
Band_7	PF01145.25	gi|429216966|ref|YP_007174956.1|	-	3.2e-28	98.9	4.4	3.2e-28	98.9	4.4	1.6	2	0	0	2	2	2	1	SPFH	domain	/	Band	7	family
Band_7_1	PF13421.6	gi|429216966|ref|YP_007174956.1|	-	0.00076	19.2	0.3	0.0013	18.5	0.3	1.4	1	0	0	1	1	1	1	SPFH	domain-Band	7	family
DUF4382	PF14321.6	gi|429216967|ref|YP_007174957.1|	-	5.1e-14	52.7	0.0	6e-14	52.5	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4382)
CdvA	PF18822.1	gi|429216968|ref|YP_007174958.1|	-	7e-33	113.1	10.7	7.3e-33	113.0	9.2	1.7	2	0	0	2	2	2	1	CdvA-like	coiled-coil	domain
Bacillus_HBL	PF05791.11	gi|429216968|ref|YP_007174958.1|	-	0.0068	16.3	0.3	1.6	8.5	0.1	2.6	3	0	0	3	3	3	2	Bacillus	haemolytic	enterotoxin	(HBL)
DUF1664	PF07889.12	gi|429216968|ref|YP_007174958.1|	-	0.011	15.7	5.0	0.6	10.2	0.2	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
MS_channel	PF00924.18	gi|429216968|ref|YP_007174958.1|	-	0.025	14.1	1.5	0.064	12.8	1.5	2.0	1	1	0	1	1	1	0	Mechanosensitive	ion	channel
Biotin_lipoyl_2	PF13533.6	gi|429216968|ref|YP_007174958.1|	-	0.11	12.3	0.4	0.48	10.3	0.4	2.1	1	0	0	1	1	1	0	Biotin-lipoyl	like
NBD94	PF16830.5	gi|429216968|ref|YP_007174958.1|	-	0.28	11.6	14.2	15	6.1	0.1	3.5	2	1	0	2	2	2	0	Nucleotide-Binding	Domain	94	of	RH
LMBR1	PF04791.16	gi|429216968|ref|YP_007174958.1|	-	0.37	9.6	3.3	0.46	9.3	3.3	1.2	1	0	0	1	1	1	0	LMBR1-like	membrane	protein
Snf7	PF03357.21	gi|429216969|ref|YP_007174959.1|	-	0.00021	21.0	1.9	0.00032	20.3	1.9	1.3	1	0	0	1	1	1	1	Snf7
DUF913	PF06025.12	gi|429216969|ref|YP_007174959.1|	-	0.059	12.3	0.0	0.081	11.9	0.0	1.2	1	0	0	1	1	1	0	Domain	of	Unknown	Function	(DUF913)
TrmB	PF01978.19	gi|429216970|ref|YP_007174960.1|	-	1e-12	47.8	0.1	3.3e-11	42.9	0.0	2.9	3	0	0	3	3	3	1	Sugar-specific	transcriptional	regulator	TrmB
CHIPS	PF11434.8	gi|429216970|ref|YP_007174960.1|	-	0.018	14.9	0.3	0.077	12.8	0.1	2.0	2	0	0	2	2	2	0	Chemotaxis-inhibiting	protein	CHIPS
E2F_TDP	PF02319.20	gi|429216970|ref|YP_007174960.1|	-	0.04	14.0	0.1	0.47	10.5	0.0	2.7	4	0	0	4	4	4	0	E2F/DP	family	winged-helix	DNA-binding	domain
APG17	PF04108.12	gi|429216970|ref|YP_007174960.1|	-	0.041	13.0	0.1	0.067	12.3	0.1	1.4	1	0	0	1	1	1	0	Autophagy	protein	Apg17
Vps5	PF09325.10	gi|429216970|ref|YP_007174960.1|	-	0.062	12.8	0.1	0.12	11.9	0.0	1.5	1	1	0	1	1	1	0	Vps5	C	terminal	like
CGI-121	PF08617.10	gi|429216970|ref|YP_007174960.1|	-	0.072	13.2	0.2	0.14	12.3	0.2	1.6	1	1	0	1	1	1	0	Kinase	binding	protein	CGI-121
DUF2935	PF11155.8	gi|429216970|ref|YP_007174960.1|	-	0.73	10.2	3.2	0.84	10.0	1.0	2.3	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF2935)
Baculo_PEP_C	PF04513.12	gi|429216972|ref|YP_007174962.1|	-	0.056	13.5	0.1	0.079	13.0	0.1	1.1	1	0	0	1	1	1	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
NPV_P10	PF05531.12	gi|429216972|ref|YP_007174962.1|	-	0.089	13.3	0.5	0.17	12.4	0.5	1.5	1	1	0	1	1	1	0	Nucleopolyhedrovirus	P10	protein
DASH_Dam1	PF08653.10	gi|429216972|ref|YP_007174962.1|	-	0.16	11.8	0.7	0.68	9.8	0.1	1.9	1	1	0	1	1	1	0	DASH	complex	subunit	Dam1
Amidohydro_1	PF01979.20	gi|429216973|ref|YP_007174963.1|	-	7.9e-53	180.0	1.2	9.4e-53	179.7	1.2	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.11	gi|429216973|ref|YP_007174963.1|	-	2.7e-16	60.1	0.6	4e-08	33.2	0.3	2.6	2	1	0	2	2	2	2	Amidohydrolase	family
MFS_1	PF07690.16	gi|429216975|ref|YP_007174965.1|	-	8.1e-28	97.3	32.8	4.2e-25	88.4	28.6	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_1_like	PF12832.7	gi|429216975|ref|YP_007174965.1|	-	4.2e-07	29.2	20.7	2.9e-05	23.1	20.7	2.1	1	1	0	1	1	1	1	MFS_1	like	family
Sugar_tr	PF00083.24	gi|429216975|ref|YP_007174965.1|	-	0.0002	20.3	13.7	0.0002	20.3	13.7	2.2	1	1	0	2	2	2	2	Sugar	(and	other)	transporter
MFS_3	PF05977.13	gi|429216975|ref|YP_007174965.1|	-	0.29	9.5	7.1	0.27	9.6	6.4	1.6	1	1	0	1	1	1	0	Transmembrane	secretion	effector
Sugar_tr	PF00083.24	gi|429216976|ref|YP_007174966.1|	-	3.9e-19	68.8	29.9	9.3e-18	64.3	2.3	2.4	1	1	1	2	2	2	2	Sugar	(and	other)	transporter
MFS_1	PF07690.16	gi|429216976|ref|YP_007174966.1|	-	1.7e-18	66.7	45.7	9.5e-14	51.1	16.8	2.6	1	1	2	3	3	3	2	Major	Facilitator	Superfamily
Radical_SAM	PF04055.21	gi|429216977|ref|YP_007174967.1|	-	5.3e-16	59.5	0.1	7.4e-16	59.0	0.1	1.2	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|429216977|ref|YP_007174967.1|	-	5.9e-06	26.4	1.8	8.4e-06	25.9	0.3	2.0	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.6	gi|429216977|ref|YP_007174967.1|	-	0.046	13.9	1.1	0.3	11.3	0.1	2.2	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
DUF1828	PF08861.10	gi|429216977|ref|YP_007174967.1|	-	0.055	13.7	0.1	0.23	11.8	0.1	2.1	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF1828
DUF2299	PF10061.9	gi|429216979|ref|YP_007174969.1|	-	1.4e-41	141.5	1.7	1.6e-41	141.3	1.7	1.0	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2299)
IF-2B	PF01008.17	gi|429216980|ref|YP_007174970.1|	-	3.8e-78	262.5	0.1	4.5e-78	262.3	0.1	1.0	1	0	0	1	1	1	1	Initiation	factor	2	subunit	family
TPR_15	PF13429.6	gi|429216980|ref|YP_007174970.1|	-	0.0027	17.0	0.2	0.0039	16.4	0.2	1.1	1	0	0	1	1	1	1	Tetratricopeptide	repeat
Iso_dh	PF00180.20	gi|429216981|ref|YP_007174971.1|	-	2.3e-95	319.7	0.0	2.7e-95	319.5	0.0	1.0	1	0	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
Tox-SGS	PF15651.6	gi|429216981|ref|YP_007174971.1|	-	0.21	11.8	0.0	0.38	11.0	0.0	1.3	1	0	0	1	1	1	0	Salivary	glad	secreted	protein	domain	toxin
Hydrolase	PF00702.26	gi|429216982|ref|YP_007174972.1|	-	4.4e-10	40.2	0.0	1.7e-08	35.1	0.0	2.1	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.7	gi|429216982|ref|YP_007174972.1|	-	1.1e-09	38.9	0.0	1.6e-09	38.5	0.0	1.2	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD_2	PF13419.6	gi|429216982|ref|YP_007174972.1|	-	9e-05	22.6	0.4	0.00091	19.4	0.4	2.1	1	1	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.12	gi|429216982|ref|YP_007174972.1|	-	0.0038	17.0	0.6	0.043	13.5	0.1	2.1	2	0	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_6	PF13344.6	gi|429216982|ref|YP_007174972.1|	-	0.0061	16.6	0.0	0.029	14.5	0.0	2.0	2	1	0	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
DUF123	PF01986.16	gi|429216983|ref|YP_007174973.1|	-	8.3e-16	58.3	0.0	1.1e-15	57.9	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF123
AAA_26	PF13500.6	gi|429216984|ref|YP_007174974.1|	-	0.02	14.7	0.1	0.87	9.4	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
DUF981	PF06168.11	gi|429216985|ref|YP_007174975.1|	-	7.8e-53	179.2	21.2	8.7e-53	179.0	21.2	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF981)
DUF3784	PF12650.7	gi|429216985|ref|YP_007174975.1|	-	1.7	8.9	15.3	5.4	7.3	1.6	3.2	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF3784)
DAO	PF01266.24	gi|429216987|ref|YP_007174977.1|	-	1.1e-20	74.5	0.0	1.1e-19	71.3	0.0	1.9	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.6	gi|429216987|ref|YP_007174977.1|	-	3.6e-06	27.1	0.0	7e-06	26.2	0.0	1.5	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_2	PF07992.14	gi|429216987|ref|YP_007174977.1|	-	0.00086	18.6	0.0	0.0014	18.0	0.0	1.5	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.24	gi|429216987|ref|YP_007174977.1|	-	0.0031	16.6	0.0	0.0043	16.2	0.0	1.1	1	0	0	1	1	1	1	FAD	binding	domain
GIDA	PF01134.22	gi|429216987|ref|YP_007174977.1|	-	0.0093	15.1	0.1	0.02	14.0	0.1	1.5	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
Thi4	PF01946.17	gi|429216987|ref|YP_007174977.1|	-	0.015	14.5	0.0	0.031	13.5	0.0	1.6	1	0	0	1	1	1	0	Thi4	family
UDPG_MGDP_dh_N	PF03721.14	gi|429216987|ref|YP_007174977.1|	-	0.02	14.5	0.0	0.037	13.6	0.0	1.4	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
3HCDH_N	PF02737.18	gi|429216987|ref|YP_007174977.1|	-	0.03	14.2	0.0	0.047	13.6	0.0	1.3	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
FAD_binding_3	PF01494.19	gi|429216987|ref|YP_007174977.1|	-	0.042	13.1	0.0	0.064	12.5	0.0	1.3	1	0	0	1	1	1	0	FAD	binding	domain
HI0933_like	PF03486.14	gi|429216987|ref|YP_007174977.1|	-	0.075	11.7	0.0	0.11	11.2	0.0	1.2	1	0	0	1	1	1	0	HI0933-like	protein
SAM_adeno_trans	PF01887.16	gi|429216988|ref|YP_007174978.1|	-	6.5e-73	245.0	0.0	7.4e-73	244.9	0.0	1.0	1	0	0	1	1	1	1	S-adenosyl-l-methionine	hydroxide	adenosyltransferase
Aminotran_1_2	PF00155.21	gi|429216989|ref|YP_007174979.1|	-	1.4e-65	221.9	0.0	1.5e-65	221.7	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
DegT_DnrJ_EryC1	PF01041.17	gi|429216989|ref|YP_007174979.1|	-	4.4e-08	32.8	0.0	7.9e-08	32.0	0.0	1.3	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_5	PF00266.19	gi|429216989|ref|YP_007174979.1|	-	6.1e-07	28.7	0.0	1.2e-06	27.8	0.0	1.4	1	0	0	1	1	1	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.20	gi|429216989|ref|YP_007174979.1|	-	6.9e-06	24.8	0.0	1.4e-05	23.9	0.0	1.4	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Beta_elim_lyase	PF01212.21	gi|429216989|ref|YP_007174979.1|	-	0.00011	21.6	0.0	0.0002	20.8	0.0	1.3	1	0	0	1	1	1	1	Beta-eliminating	lyase
GTP_EFTU_D2	PF03144.25	gi|429216990|ref|YP_007174980.1|	-	0.0084	16.5	0.0	0.02	15.3	0.0	1.6	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
DALR_2	PF09190.11	gi|429216991|ref|YP_007174981.1|	-	0.12	12.9	0.0	0.19	12.2	0.0	1.3	1	0	0	1	1	1	0	DALR	domain
DUF2250	PF10007.9	gi|429216992|ref|YP_007174982.1|	-	0.0004	20.4	0.2	0.0011	19.1	0.2	1.7	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
RNA_GG_bind	PF10258.9	gi|429216992|ref|YP_007174982.1|	-	0.13	12.3	0.1	0.18	11.9	0.1	1.5	1	1	0	1	1	1	0	PHAX	RNA-binding	domain
PHP_C	PF13263.6	gi|429216993|ref|YP_007174983.1|	-	5.3e-10	38.9	0.0	1e-09	38.0	0.0	1.5	1	0	0	1	1	1	1	PHP-associated
PHP	PF02811.19	gi|429216993|ref|YP_007174983.1|	-	9.1e-07	29.3	0.0	9.1e-07	29.3	0.0	1.2	1	0	0	1	1	1	1	PHP	domain
Glycos_transf_2	PF00535.26	gi|429216994|ref|YP_007174984.1|	-	2e-17	63.6	0.1	2.9e-17	63.0	0.1	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_4	PF13704.6	gi|429216994|ref|YP_007174984.1|	-	2.7e-05	24.6	0.1	5.6e-05	23.6	0.1	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|429216994|ref|YP_007174984.1|	-	7.9e-05	22.6	0.1	0.00013	22.0	0.1	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.9	gi|429216994|ref|YP_007174984.1|	-	0.00066	19.2	0.3	0.001	18.6	0.3	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_transf_21	PF13506.6	gi|429216994|ref|YP_007174984.1|	-	0.0029	17.1	0.0	0.006	16.1	0.0	1.4	2	0	0	2	2	2	1	Glycosyl	transferase	family	21
Glyco_trans_2_3	PF13632.6	gi|429216994|ref|YP_007174984.1|	-	0.0033	17.4	0.2	0.0046	16.9	0.2	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
PIRT	PF15099.6	gi|429216994|ref|YP_007174984.1|	-	1.4	8.5	3.9	1.6	8.3	0.4	2.2	2	0	0	2	2	2	0	Phosphoinositide-interacting	protein	family
Metallophos	PF00149.28	gi|429216995|ref|YP_007174985.1|	-	6.9e-26	92.0	4.6	9.7e-26	91.5	4.6	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|429216995|ref|YP_007174985.1|	-	2.2e-06	27.9	0.0	3.7e-06	27.2	0.0	1.4	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Ycf15	PF10705.9	gi|429216995|ref|YP_007174985.1|	-	0.089	13.0	0.0	0.31	11.2	0.0	1.9	1	0	0	1	1	1	0	Chloroplast	protein	precursor	Ycf15	putative
PALP	PF00291.25	gi|429216996|ref|YP_007174986.1|	-	6.3e-48	163.7	0.0	1.4e-47	162.5	0.0	1.5	1	1	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
SET_assoc	PF11767.8	gi|429216996|ref|YP_007174986.1|	-	0.1	12.3	0.0	0.22	11.2	0.0	1.5	1	0	0	1	1	1	0	Histone	lysine	methyltransferase	SET	associated
DnaB	PF00772.21	gi|429216996|ref|YP_007174986.1|	-	0.12	12.5	0.5	0.53	10.4	0.0	2.3	3	0	0	3	3	3	0	DnaB-like	helicase	N	terminal	domain
AIRS_C	PF02769.22	gi|429216997|ref|YP_007174987.1|	-	1.8e-06	28.2	0.0	4.6e-06	26.8	0.0	1.7	1	1	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
Acylphosphatase	PF00708.18	gi|429216998|ref|YP_007174988.1|	-	1.7e-21	76.4	0.0	1.9e-21	76.3	0.0	1.0	1	0	0	1	1	1	1	Acylphosphatase
TusA	PF01206.17	gi|429216999|ref|YP_007174989.1|	-	2.4e-10	40.1	0.0	2.8e-10	39.9	0.0	1.1	1	0	0	1	1	1	1	Sulfurtransferase	TusA
DUF2249	PF10006.9	gi|429216999|ref|YP_007174989.1|	-	0.003	17.4	0.0	0.0041	17.0	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2249)
HIT	PF01230.23	gi|429217000|ref|YP_007174990.1|	-	2.6e-23	82.6	0.5	3.5e-23	82.2	0.1	1.4	2	0	0	2	2	2	1	HIT	domain
DcpS_C	PF11969.8	gi|429217000|ref|YP_007174990.1|	-	9.2e-14	51.9	1.1	1.8e-13	50.9	0.5	1.8	1	1	0	1	1	1	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
CwfJ_C_1	PF04677.15	gi|429217000|ref|YP_007174990.1|	-	0.00076	19.3	0.0	0.0011	18.8	0.0	1.3	1	0	0	1	1	1	1	Protein	similar	to	CwfJ	C-terminus	1
CDH	PF02611.15	gi|429217000|ref|YP_007174990.1|	-	0.045	13.4	0.0	0.057	13.0	0.0	1.2	1	0	0	1	1	1	0	CDP-diacylglycerol	pyrophosphatase
MJ1316	PF04457.12	gi|429217001|ref|YP_007174991.1|	-	1.1e-11	45.3	0.6	1.4e-11	45.0	0.6	1.1	1	0	0	1	1	1	1	MJ1316	RNA	cyclic	group	end	recognition	domain
APH	PF01636.23	gi|429217002|ref|YP_007174992.1|	-	0.077	12.9	0.0	1.9	8.3	0.0	2.1	1	1	1	2	2	2	0	Phosphotransferase	enzyme	family
HTH_24	PF13412.6	gi|429217003|ref|YP_007174993.1|	-	1e-05	25.0	0.0	2.6e-05	23.7	0.0	1.7	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.19	gi|429217003|ref|YP_007174993.1|	-	2.4e-05	24.1	0.1	7.2e-05	22.6	0.1	1.7	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_11	PF08279.12	gi|429217003|ref|YP_007174993.1|	-	0.0014	18.6	0.0	0.0032	17.4	0.0	1.6	1	0	0	1	1	1	1	HTH	domain
B-block_TFIIIC	PF04182.12	gi|429217003|ref|YP_007174993.1|	-	0.0039	17.3	0.1	0.0094	16.1	0.1	1.6	1	0	0	1	1	1	1	B-block	binding	subunit	of	TFIIIC
HTH_AsnC-type	PF13404.6	gi|429217003|ref|YP_007174993.1|	-	0.004	16.9	0.0	0.0076	16.1	0.0	1.5	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
MarR	PF01047.22	gi|429217003|ref|YP_007174993.1|	-	0.0047	16.8	0.0	0.0098	15.8	0.0	1.5	1	0	0	1	1	1	1	MarR	family
HTH_WhiA	PF02650.14	gi|429217003|ref|YP_007174993.1|	-	0.013	15.8	0.1	0.043	14.2	0.1	1.9	1	0	0	1	1	1	0	WhiA	C-terminal	HTH	domain
DDRGK	PF09756.9	gi|429217003|ref|YP_007174993.1|	-	0.043	13.4	0.8	0.082	12.5	0.2	1.7	2	0	0	2	2	2	0	DDRGK	domain
HTH_20	PF12840.7	gi|429217003|ref|YP_007174993.1|	-	0.1	12.7	0.0	0.19	11.8	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
Yeast-kill-tox	PF09207.11	gi|429217003|ref|YP_007174993.1|	-	0.38	11.4	3.1	2.8	8.7	0.4	2.2	1	1	1	2	2	2	0	Yeast	killer	toxin
tRNA-synt_1b	PF00579.25	gi|429217004|ref|YP_007174994.1|	-	8.5e-42	143.5	0.0	1.1e-41	143.1	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(W	and	Y)
RHH_3	PF12651.7	gi|429217005|ref|YP_007174995.1|	-	5e-10	39.2	0.0	8.3e-10	38.5	0.0	1.4	1	0	0	1	1	1	1	Ribbon-helix-helix	domain
RHH_1	PF01402.21	gi|429217005|ref|YP_007174995.1|	-	5e-07	29.4	0.0	2.3e-06	27.3	0.0	2.0	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
NikR_C	PF08753.11	gi|429217005|ref|YP_007174995.1|	-	0.00023	21.2	0.5	0.003	17.7	0.0	2.1	1	1	1	2	2	2	1	NikR	C	terminal	nickel	binding	domain
RhoGAP	PF00620.27	gi|429217005|ref|YP_007174995.1|	-	0.017	14.9	0.1	0.13	12.1	0.0	1.9	1	1	1	2	2	2	0	RhoGAP	domain
Fe_dep_repr_C	PF02742.15	gi|429217006|ref|YP_007174996.1|	-	7e-14	51.7	0.3	1.4e-13	50.7	0.0	1.6	2	0	0	2	2	2	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
Fe_dep_repress	PF01325.19	gi|429217006|ref|YP_007174996.1|	-	1e-11	44.9	0.0	1.7e-11	44.1	0.0	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_Crp_2	PF13545.6	gi|429217006|ref|YP_007174996.1|	-	0.00025	21.0	0.0	0.00059	19.8	0.0	1.6	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
MarR	PF01047.22	gi|429217006|ref|YP_007174996.1|	-	0.0004	20.3	0.0	0.00081	19.3	0.0	1.5	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.7	gi|429217006|ref|YP_007174996.1|	-	0.00085	19.2	0.0	0.0013	18.5	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.6	gi|429217006|ref|YP_007174996.1|	-	0.0013	18.3	0.0	0.0028	17.2	0.0	1.7	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_34	PF13601.6	gi|429217006|ref|YP_007174996.1|	-	0.0034	17.5	0.0	0.014	15.5	0.0	2.0	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
GntR	PF00392.21	gi|429217006|ref|YP_007174996.1|	-	0.0045	16.6	0.0	0.029	14.0	0.0	2.1	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	gntR	family
RPA_C	PF08784.11	gi|429217006|ref|YP_007174996.1|	-	0.0085	16.7	0.0	0.016	15.8	0.0	1.4	1	0	0	1	1	1	1	Replication	protein	A	C	terminal
Rrf2	PF02082.20	gi|429217006|ref|YP_007174996.1|	-	0.03	14.7	0.0	0.063	13.6	0.0	1.6	2	0	0	2	2	2	0	Transcriptional	regulator
Rio2_N	PF09202.11	gi|429217006|ref|YP_007174996.1|	-	0.083	13.1	0.0	0.17	12.1	0.0	1.5	1	0	0	1	1	1	0	Rio2,	N-terminal
Abhydrolase_5	PF12695.7	gi|429217006|ref|YP_007174996.1|	-	0.11	12.2	0.1	0.21	11.3	0.1	1.5	1	1	0	1	1	1	0	Alpha/beta	hydrolase	family
Malic_M	PF03949.15	gi|429217007|ref|YP_007174997.1|	-	3.7e-22	78.8	2.2	2.2e-21	76.3	2.2	2.1	1	1	0	1	1	1	1	Malic	enzyme,	NAD	binding	domain
malic	PF00390.19	gi|429217007|ref|YP_007174997.1|	-	2.8e-21	76.1	0.0	3.6e-15	56.2	0.0	2.8	1	1	1	2	2	2	2	Malic	enzyme,	N-terminal	domain
Shikimate_DH	PF01488.20	gi|429217007|ref|YP_007174997.1|	-	0.021	14.9	0.3	7.3	6.7	0.0	2.4	2	0	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
Terminase_6C	PF17289.2	gi|429217007|ref|YP_007174997.1|	-	0.054	13.6	0.0	2.1	8.4	0.0	2.6	2	1	1	3	3	3	0	Terminase	RNaseH-like	domain
Gpr1_Fun34_YaaH	PF01184.19	gi|429217008|ref|YP_007174998.1|	-	1.4e-28	99.9	24.7	2.2e-28	99.3	24.7	1.3	1	1	0	1	1	1	1	GPR1/FUN34/yaaH	family
AMP-binding	PF00501.28	gi|429217009|ref|YP_007174999.1|	-	1.2e-91	307.5	0.0	1.5e-91	307.1	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.6	gi|429217009|ref|YP_007174999.1|	-	4.5e-28	98.0	0.7	9.4e-28	97.0	0.7	1.6	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
ACAS_N	PF16177.5	gi|429217009|ref|YP_007174999.1|	-	1e-18	67.0	3.0	2.2e-18	65.9	3.0	1.6	1	0	0	1	1	1	1	Acetyl-coenzyme	A	synthetase	N-terminus
Amidohydro_2	PF04909.14	gi|429217010|ref|YP_007175000.1|	-	6.2e-28	98.4	0.0	7.7e-28	98.1	0.0	1.3	1	1	0	1	1	1	1	Amidohydrolase
TatD_DNase	PF01026.21	gi|429217010|ref|YP_007175000.1|	-	5.1e-05	22.8	0.0	0.0024	17.3	0.0	2.1	2	0	0	2	2	2	2	TatD	related	DNase
HTH_IclR	PF09339.10	gi|429217011|ref|YP_007175001.1|	-	0.031	14.1	0.0	0.047	13.5	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
DUF4004	PF13171.6	gi|429217011|ref|YP_007175001.1|	-	0.06	13.6	0.1	0.068	13.4	0.1	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4004)
HTH_5	PF01022.20	gi|429217011|ref|YP_007175001.1|	-	0.065	13.1	0.0	0.11	12.4	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
HTH_psq	PF05225.16	gi|429217011|ref|YP_007175001.1|	-	0.14	11.9	0.0	0.25	11.1	0.0	1.4	1	0	0	1	1	1	0	helix-turn-helix,	Psq	domain
Mvb12	PF09452.10	gi|429217012|ref|YP_007175002.1|	-	0.0072	16.7	0.8	0.016	15.6	0.4	1.8	2	0	0	2	2	2	1	ESCRT-I	subunit	Mvb12
SBP_bac_5	PF00496.22	gi|429217014|ref|YP_007175004.1|	-	8e-55	186.3	4.3	8e-55	186.3	4.3	2.0	1	1	1	2	2	2	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
PKD	PF00801.20	gi|429217014|ref|YP_007175004.1|	-	5.5e-07	29.3	5.9	0.00058	19.6	0.1	4.2	4	0	0	4	4	4	2	PKD	domain
PsaL	PF02605.15	gi|429217014|ref|YP_007175004.1|	-	0.069	12.8	1.6	7.1	6.3	0.4	2.5	2	0	0	2	2	2	0	Photosystem	I	reaction	centre	subunit	XI
DUF2797	PF10977.8	gi|429217015|ref|YP_007175005.1|	-	4.2e-06	26.8	0.0	7.2e-06	26.1	0.0	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF2797)
NTP_transferase	PF00483.23	gi|429217016|ref|YP_007175006.1|	-	2.8e-26	92.6	0.0	3.2e-26	92.4	0.0	1.0	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.7	gi|429217016|ref|YP_007175006.1|	-	8.4e-10	39.2	0.0	1.1e-09	38.9	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
SBP_bac_5	PF00496.22	gi|429217017|ref|YP_007175007.1|	-	2.6e-41	141.9	6.1	4.6e-41	141.0	6.1	1.3	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
PKD	PF00801.20	gi|429217017|ref|YP_007175007.1|	-	1.9e-07	30.8	4.7	7.5e-07	28.9	0.7	3.6	3	1	1	4	4	4	1	PKD	domain
DUF4083	PF13314.6	gi|429217017|ref|YP_007175007.1|	-	0.15	12.1	3.4	0.3	11.1	3.4	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4083)
Pox_EPC_I2-L1	PF12575.8	gi|429217017|ref|YP_007175007.1|	-	0.15	12.3	6.5	0.77	10.0	1.3	2.6	2	0	0	2	2	2	0	Poxvirus	entry	protein	complex	L1	and	I2
DUF126	PF01989.16	gi|429217018|ref|YP_007175008.1|	-	1.4e-24	85.7	0.1	2.4e-24	84.9	0.1	1.4	1	0	0	1	1	1	1	Aconitase	X	swivel	domain
DUF521	PF04412.13	gi|429217019|ref|YP_007175009.1|	-	2.5e-122	408.5	0.0	3e-122	408.2	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF521)
Cons_hypoth95	PF03602.15	gi|429217019|ref|YP_007175009.1|	-	0.014	15.0	0.4	0.023	14.4	0.4	1.3	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
SMC_N	PF02463.19	gi|429217019|ref|YP_007175009.1|	-	0.23	10.8	0.8	0.43	10.0	0.8	1.4	1	0	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
AGOG	PF09171.10	gi|429217020|ref|YP_007175010.1|	-	9.1e-05	21.9	0.0	0.00016	21.1	0.0	1.3	1	0	0	1	1	1	1	N-glycosylase/DNA	lyase
HDV_ag	PF01517.18	gi|429217021|ref|YP_007175011.1|	-	0.12	12.2	0.2	0.14	11.9	0.2	1.1	1	0	0	1	1	1	0	Hepatitis	delta	virus	delta	antigen
PNP_UDP_1	PF01048.20	gi|429217022|ref|YP_007175012.1|	-	5e-33	114.3	0.0	5.6e-33	114.1	0.0	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
MFS_1	PF07690.16	gi|429217023|ref|YP_007175013.1|	-	1.8e-38	132.4	73.6	5.2e-27	94.7	40.6	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_1_like	PF12832.7	gi|429217023|ref|YP_007175013.1|	-	6.1e-08	31.9	33.2	6.2e-07	28.6	32.9	2.1	1	1	0	1	1	1	1	MFS_1	like	family
MFS_2	PF13347.6	gi|429217023|ref|YP_007175013.1|	-	0.0011	17.6	41.8	0.0038	15.8	41.3	2.0	1	1	0	1	1	1	1	MFS/sugar	transport	protein
Usp	PF00582.26	gi|429217024|ref|YP_007175014.1|	-	5.2e-29	101.6	0.0	6.2e-29	101.3	0.0	1.1	1	0	0	1	1	1	1	Universal	stress	protein	family
Alba	PF01918.21	gi|429217025|ref|YP_007175015.1|	-	5.9e-05	22.8	0.3	8.1e-05	22.4	0.3	1.3	1	0	0	1	1	1	1	Alba
SARS_3b	PF12383.8	gi|429217025|ref|YP_007175015.1|	-	0.023	14.8	0.1	0.023	14.8	0.1	1.1	1	0	0	1	1	1	0	Severe	acute	respiratory	syndrome	coronavirus	3b	protein
EFG_II	PF14492.6	gi|429217025|ref|YP_007175015.1|	-	0.095	12.8	0.0	0.12	12.5	0.0	1.3	1	0	0	1	1	1	0	Elongation	Factor	G,	domain	II
Topoisom_bac	PF01131.20	gi|429217026|ref|YP_007175016.1|	-	7.9e-70	235.9	5.1	1.1e-69	235.5	5.1	1.2	1	0	0	1	1	1	1	DNA	topoisomerase
Toprim	PF01751.22	gi|429217026|ref|YP_007175016.1|	-	6.4e-23	80.9	0.0	3.8e-22	78.4	0.0	2.4	2	0	0	2	2	2	1	Toprim	domain
DEAD	PF00270.29	gi|429217026|ref|YP_007175016.1|	-	5.5e-15	55.6	0.0	3.6e-14	52.9	0.0	2.5	2	2	0	2	2	2	1	DEAD/DEAH	box	helicase
zf_Rg	PF17915.1	gi|429217026|ref|YP_007175016.1|	-	3e-12	45.8	1.5	3e-12	45.8	1.5	2.2	2	0	0	2	2	2	1	Reverse	gyrase	zinc	finger
ResIII	PF04851.15	gi|429217026|ref|YP_007175016.1|	-	6.7e-07	29.5	0.0	2e-06	27.9	0.0	1.9	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.31	gi|429217026|ref|YP_007175016.1|	-	0.00033	21.0	2.1	0.042	14.2	0.0	4.2	2	1	1	3	3	3	1	Helicase	conserved	C-terminal	domain
HypA	PF01155.19	gi|429217026|ref|YP_007175016.1|	-	0.0015	18.6	2.8	0.055	13.5	0.4	2.7	2	0	0	2	2	2	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
DZR	PF12773.7	gi|429217026|ref|YP_007175016.1|	-	0.011	15.8	7.1	0.03	14.3	1.6	2.3	2	0	0	2	2	2	0	Double	zinc	ribbon
zinc_ribbon_2	PF13240.6	gi|429217026|ref|YP_007175016.1|	-	0.011	15.4	8.6	0.79	9.5	0.3	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
Toprim_4	PF13662.6	gi|429217026|ref|YP_007175016.1|	-	0.018	15.5	0.3	0.32	11.5	0.0	3.0	3	0	0	3	3	3	0	Toprim	domain
DUF87	PF01935.17	gi|429217026|ref|YP_007175016.1|	-	0.033	14.3	0.8	14	5.7	0.0	3.9	3	0	0	3	3	3	0	Helicase	HerA,	central	domain
zf_UBZ	PF18439.1	gi|429217026|ref|YP_007175016.1|	-	0.035	13.7	1.5	7.1	6.3	0.1	2.6	2	0	0	2	2	2	0	Ubiquitin-Binding	Zinc	Finger
Ribul_P_3_epim	PF00834.19	gi|429217026|ref|YP_007175016.1|	-	0.084	12.2	0.0	8.6	5.7	0.0	2.3	2	0	0	2	2	2	0	Ribulose-phosphate	3	epimerase	family
AAA_22	PF13401.6	gi|429217026|ref|YP_007175016.1|	-	0.1	12.8	0.1	1.8	8.8	0.1	2.9	2	1	0	2	2	2	0	AAA	domain
AAA_30	PF13604.6	gi|429217026|ref|YP_007175016.1|	-	0.11	12.3	0.0	0.19	11.4	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Zn-ribbon_8	PF09723.10	gi|429217026|ref|YP_007175016.1|	-	0.11	12.7	7.6	0.27	11.4	1.3	2.5	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-ribbon_3	PF13248.6	gi|429217026|ref|YP_007175016.1|	-	0.15	11.5	7.7	1.5	8.3	0.1	2.8	3	0	0	3	3	3	0	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.11	gi|429217026|ref|YP_007175016.1|	-	0.22	11.5	8.9	0.64	10.0	2.0	2.7	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
DUF4215	PF13948.6	gi|429217026|ref|YP_007175016.1|	-	0.27	11.7	1.4	1.1	9.7	1.4	2.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4215)
zinc-ribbons_6	PF07191.12	gi|429217026|ref|YP_007175016.1|	-	0.58	10.2	4.8	5.1	7.1	0.3	2.3	2	0	0	2	2	2	0	zinc-ribbons
zf-C2HC5	PF06221.13	gi|429217026|ref|YP_007175016.1|	-	1.5	8.8	4.8	6.9	6.7	0.6	2.3	2	0	0	2	2	2	0	Putative	zinc	finger	motif,	C2HC5-type
zinc_ribbon_15	PF17032.5	gi|429217026|ref|YP_007175016.1|	-	2	9.2	5.9	0.5	11.1	0.7	2.3	2	0	0	2	2	2	0	zinc-ribbon	family
DUF35_N	PF12172.8	gi|429217026|ref|YP_007175016.1|	-	2.4	8.1	4.2	9.1	6.3	0.5	2.4	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF1610	PF07754.11	gi|429217026|ref|YP_007175016.1|	-	4.7	7.3	6.6	0.55	10.2	0.6	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
TackOD1	PF18551.1	gi|429217026|ref|YP_007175016.1|	-	5.3	6.7	6.1	0.91	9.2	0.9	2.3	2	0	0	2	2	2	0	Thaumarchaeal	output	domain	1
zf-dskA_traR	PF01258.17	gi|429217026|ref|YP_007175016.1|	-	6.7	6.7	11.5	0.027	14.4	1.3	2.3	3	0	0	3	3	3	0	Prokaryotic	dksA/traR	C4-type	zinc	finger
SBP_bac_5	PF00496.22	gi|429217027|ref|YP_007175017.1|	-	5e-44	150.8	4.7	5e-44	150.8	4.7	1.6	2	0	0	2	2	2	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
PKD	PF00801.20	gi|429217027|ref|YP_007175017.1|	-	2e-05	24.3	2.8	0.001	18.9	0.1	4.2	4	0	0	4	4	4	1	PKD	domain
Shisa	PF13908.6	gi|429217027|ref|YP_007175017.1|	-	0.026	14.8	5.1	0.049	13.9	5.1	1.4	1	0	0	1	1	1	0	Wnt	and	FGF	inhibitory	regulator
Mucin	PF01456.17	gi|429217027|ref|YP_007175017.1|	-	0.07	13.1	13.6	0.16	11.9	13.6	1.5	1	0	0	1	1	1	0	Mucin-like	glycoprotein
Wzz	PF02706.15	gi|429217027|ref|YP_007175017.1|	-	1.2	9.5	5.5	0.32	11.3	1.5	2.2	2	0	0	2	2	2	0	Chain	length	determinant	protein
Peptidase_S9	PF00326.21	gi|429217028|ref|YP_007175018.1|	-	1e-45	155.8	0.1	1.6e-45	155.2	0.1	1.3	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
PD40	PF07676.12	gi|429217028|ref|YP_007175018.1|	-	5.9e-08	32.5	0.1	2.2e-07	30.6	0.1	2.1	1	0	0	1	1	1	1	WD40-like	Beta	Propeller	Repeat
AXE1	PF05448.12	gi|429217028|ref|YP_007175018.1|	-	8e-07	28.0	0.1	7.6e-05	21.5	0.1	2.3	1	1	0	1	1	1	1	Acetyl	xylan	esterase	(AXE1)
Peptidase_S15	PF02129.18	gi|429217028|ref|YP_007175018.1|	-	1.6e-05	24.7	0.1	0.00014	21.6	0.0	2.1	1	1	1	2	2	2	1	X-Pro	dipeptidyl-peptidase	(S15	family)
Abhydrolase_1	PF00561.20	gi|429217028|ref|YP_007175018.1|	-	4.5e-05	23.2	0.0	0.013	15.1	0.0	2.2	1	1	1	2	2	2	2	alpha/beta	hydrolase	fold
COesterase	PF00135.28	gi|429217028|ref|YP_007175018.1|	-	0.00035	19.6	0.0	0.0006	18.8	0.0	1.4	1	0	0	1	1	1	1	Carboxylesterase	family
DLH	PF01738.18	gi|429217028|ref|YP_007175018.1|	-	0.00035	20.2	0.0	0.00073	19.2	0.0	1.5	1	0	0	1	1	1	1	Dienelactone	hydrolase	family
BAAT_C	PF08840.11	gi|429217028|ref|YP_007175018.1|	-	0.036	14.0	0.0	0.12	12.3	0.0	1.9	1	1	0	1	1	1	0	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
X8	PF07983.13	gi|429217028|ref|YP_007175018.1|	-	0.11	13.2	0.1	0.89	10.3	0.0	2.4	2	0	0	2	2	2	0	X8	domain
Complex1_51K	PF01512.17	gi|429217029|ref|YP_007175019.1|	-	1.2e-46	158.3	0.0	1.7e-46	157.9	0.0	1.2	1	0	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase	51	Kd	subunit
NADH_4Fe-4S	PF10589.9	gi|429217029|ref|YP_007175019.1|	-	3.3e-16	59.1	0.0	5.2e-16	58.5	0.0	1.3	1	0	0	1	1	1	1	NADH-ubiquinone	oxidoreductase-F	iron-sulfur	binding	region
SLBB	PF10531.9	gi|429217029|ref|YP_007175019.1|	-	4.9e-05	23.1	0.1	0.0001	22.1	0.1	1.5	1	0	0	1	1	1	1	SLBB	domain
Molybdopterin	PF00384.22	gi|429217030|ref|YP_007175020.1|	-	8.2e-26	90.9	1.5	1.5e-18	67.0	0.3	2.1	1	1	1	2	2	2	2	Molybdopterin	oxidoreductase
Fer2_4	PF13510.6	gi|429217030|ref|YP_007175020.1|	-	4.7e-15	55.4	0.0	1.2e-14	54.1	0.0	1.7	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_7	PF12838.7	gi|429217030|ref|YP_007175020.1|	-	5.4e-08	33.3	14.3	0.0022	18.5	0.3	3.2	2	1	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|429217030|ref|YP_007175020.1|	-	1.6e-07	31.4	11.1	5.3e-07	29.7	5.1	2.8	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer2	PF00111.27	gi|429217030|ref|YP_007175020.1|	-	2.6e-07	30.5	1.6	3.2e-07	30.2	0.1	2.0	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_10	PF13237.6	gi|429217030|ref|YP_007175020.1|	-	8.9e-07	28.9	16.8	3.9e-05	23.7	10.5	2.9	2	1	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|429217030|ref|YP_007175020.1|	-	9.5e-07	28.4	25.2	3.8e-05	23.3	2.8	3.7	3	1	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|429217030|ref|YP_007175020.1|	-	1.2e-06	29.0	5.9	0.072	13.6	0.1	3.7	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|429217030|ref|YP_007175020.1|	-	1.9e-05	25.5	13.9	0.0003	21.7	0.9	3.8	2	1	2	4	4	4	1	4Fe-4S	double	cluster	binding	domain
Fer4_6	PF12837.7	gi|429217030|ref|YP_007175020.1|	-	2.3e-05	24.2	27.9	0.0015	18.5	3.5	3.7	4	0	0	4	4	3	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|429217030|ref|YP_007175020.1|	-	2.4e-05	24.4	19.2	3.2e-05	24.0	9.2	2.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|429217030|ref|YP_007175020.1|	-	2.6e-05	24.6	11.5	0.0054	17.1	9.3	3.4	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Molybdop_Fe4S4	PF04879.16	gi|429217030|ref|YP_007175020.1|	-	0.00061	19.7	0.2	0.0016	18.4	0.2	1.8	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase	Fe4S4	domain
Fer4_2	PF12797.7	gi|429217030|ref|YP_007175020.1|	-	0.0016	18.4	26.6	0.01	15.8	2.0	3.7	4	0	0	4	4	3	2	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|429217030|ref|YP_007175020.1|	-	0.0046	17.4	21.2	0.037	14.5	4.1	3.4	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|429217030|ref|YP_007175020.1|	-	0.043	14.0	16.5	0.99	9.6	1.4	3.3	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
DUF2122	PF09895.9	gi|429217030|ref|YP_007175020.1|	-	0.059	13.8	0.3	0.3	11.5	0.0	2.3	3	0	0	3	3	2	0	RecB-family	nuclease	(DUF2122)
Fer4_22	PF17179.4	gi|429217030|ref|YP_007175020.1|	-	0.066	14.1	7.0	4.4	8.2	0.3	3.4	3	0	0	3	3	3	0	4Fe-4S	dicluster	domain
DUF659	PF04937.15	gi|429217030|ref|YP_007175020.1|	-	0.29	11.0	3.5	2.2	8.1	0.1	3.1	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF	659)
Fer4_13	PF13370.6	gi|429217030|ref|YP_007175020.1|	-	3.7	8.1	18.5	1.4	9.5	2.6	3.6	3	0	0	3	3	3	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_6	PF12837.7	gi|429217031|ref|YP_007175021.1|	-	1.6e-18	65.9	36.1	9.8e-08	31.8	4.2	4.6	4	1	0	4	4	4	4	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|429217031|ref|YP_007175021.1|	-	1.5e-15	57.5	21.7	2.6e-06	27.9	10.7	3.6	3	1	1	4	4	4	4	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|429217031|ref|YP_007175021.1|	-	6.8e-15	55.0	24.4	1.8e-07	31.2	5.6	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|429217031|ref|YP_007175021.1|	-	3e-14	52.1	44.9	3.8e-06	26.5	4.6	5.8	4	2	0	4	4	4	4	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|429217031|ref|YP_007175021.1|	-	1.4e-11	43.8	31.9	0.00045	20.2	2.9	4.3	4	0	0	4	4	4	4	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|429217031|ref|YP_007175021.1|	-	3.8e-11	43.8	24.0	0.0025	18.7	2.1	4.2	3	1	1	4	4	4	4	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.6	gi|429217031|ref|YP_007175021.1|	-	7.8e-11	41.9	24.6	7e-07	29.3	9.1	3.6	2	1	2	4	4	4	4	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|429217031|ref|YP_007175021.1|	-	9.1e-11	41.7	32.4	2.3e-06	27.6	12.8	3.4	1	1	3	4	4	4	4	4Fe-4S	dicluster	domain
Fer4_11	PF13247.6	gi|429217031|ref|YP_007175021.1|	-	1.5e-10	41.0	12.3	1.5e-10	41.0	12.3	2.5	2	1	1	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|429217031|ref|YP_007175021.1|	-	2.7e-06	27.9	45.1	0.0065	17.3	4.5	5.1	5	0	0	5	5	5	3	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|429217031|ref|YP_007175021.1|	-	1.2e-05	25.8	29.0	0.053	14.1	1.1	4.1	2	1	3	5	5	5	5	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|429217031|ref|YP_007175021.1|	-	2.2e-05	24.6	33.9	0.0035	17.7	5.0	4.5	4	1	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|429217031|ref|YP_007175021.1|	-	0.00026	21.4	29.4	0.13	12.8	9.4	4.1	1	1	1	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|429217031|ref|YP_007175021.1|	-	0.012	16.3	3.2	0.012	16.3	3.2	4.7	2	2	1	3	3	3	0	4Fe-4S	single	cluster	domain
Fer4_22	PF17179.4	gi|429217031|ref|YP_007175021.1|	-	0.06	14.2	1.7	0.06	14.2	1.7	4.1	3	1	1	4	4	4	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|429217031|ref|YP_007175021.1|	-	0.12	12.9	26.7	2	9.0	3.8	4.6	4	1	1	5	5	5	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
AFOR_C	PF01314.18	gi|429217032|ref|YP_007175022.1|	-	1e-118	396.7	0.1	1.2e-118	396.4	0.1	1.1	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	domains	2	&	3
AFOR_N	PF02730.15	gi|429217032|ref|YP_007175022.1|	-	6.6e-73	244.8	0.1	1.2e-72	244.0	0.1	1.4	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
Transp_cyt_pur	PF02133.15	gi|429217033|ref|YP_007175023.1|	-	2.2e-34	119.0	40.9	2.5e-33	115.5	40.9	2.3	1	1	0	1	1	1	1	Permease	for	cytosine/purines,	uracil,	thiamine,	allantoin
MFS_1	PF07690.16	gi|429217034|ref|YP_007175024.1|	-	1.3e-25	90.1	54.1	1.8e-18	66.6	28.8	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_1_like	PF12832.7	gi|429217034|ref|YP_007175024.1|	-	1.1e-05	24.5	12.6	0.002	17.0	0.1	2.2	1	1	1	2	2	2	2	MFS_1	like	family
Amidinotransf	PF02274.17	gi|429217035|ref|YP_007175025.1|	-	3.8e-34	118.3	2.2	7.6e-33	114.0	0.1	2.5	2	1	0	2	2	2	1	Amidinotransferase
PAD_porph	PF04371.15	gi|429217035|ref|YP_007175025.1|	-	3.2e-05	23.4	0.1	0.0035	16.7	0.0	2.2	2	0	0	2	2	2	2	Porphyromonas-type	peptidyl-arginine	deiminase
TPP_enzyme_N	PF02776.18	gi|429217036|ref|YP_007175026.1|	-	2.8e-55	186.5	0.0	9.9e-55	184.8	0.0	1.9	3	0	0	3	3	3	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.21	gi|429217036|ref|YP_007175026.1|	-	5e-41	140.0	0.0	1e-38	132.5	0.0	2.5	2	0	0	2	2	2	2	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.22	gi|429217036|ref|YP_007175026.1|	-	5.8e-27	94.1	0.0	1.1e-26	93.2	0.0	1.5	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
Fe-ADH	PF00465.19	gi|429217037|ref|YP_007175027.1|	-	5.8e-86	288.6	0.0	6.5e-86	288.4	0.0	1.0	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH_2	PF13685.6	gi|429217037|ref|YP_007175027.1|	-	6.6e-19	68.6	0.1	9e-09	35.4	0.0	2.1	2	0	0	2	2	2	2	Iron-containing	alcohol	dehydrogenase
DHQ_synthase	PF01761.20	gi|429217037|ref|YP_007175027.1|	-	0.0024	17.1	0.2	2.7	7.1	0.0	3.1	3	0	0	3	3	3	2	3-dehydroquinate	synthase
SCP2	PF02036.17	gi|429217038|ref|YP_007175028.1|	-	3.1e-11	43.7	0.0	5.1e-11	42.9	0.0	1.4	1	1	0	1	1	1	1	SCP-2	sterol	transfer	family
HTH_10	PF04967.12	gi|429217040|ref|YP_007175030.1|	-	4.6e-13	48.8	0.0	8.8e-13	47.8	0.0	1.5	1	0	0	1	1	1	1	HTH	DNA	binding	domain
Sigma70_r3	PF04539.16	gi|429217040|ref|YP_007175030.1|	-	0.029	14.5	0.1	0.099	12.8	0.0	1.9	1	1	1	2	2	2	0	Sigma-70	region	3
eRF1_3	PF03465.15	gi|429217040|ref|YP_007175030.1|	-	0.044	14.3	0.1	0.072	13.6	0.1	1.4	1	0	0	1	1	1	0	eRF1	domain	3
DUF3783	PF12646.7	gi|429217040|ref|YP_007175030.1|	-	0.081	12.9	0.2	4.6	7.3	0.0	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3783)
COX1	PF00115.20	gi|429217041|ref|YP_007175031.1|	-	7.8e-32	110.7	58.0	7.8e-32	110.7	58.0	2.1	3	0	0	3	3	3	1	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
Consortin_C	PF15281.6	gi|429217042|ref|YP_007175032.1|	-	0.033	14.2	3.4	3.3	7.7	0.5	2.3	2	0	0	2	2	2	0	Consortin	C-terminus
DUF998	PF06197.13	gi|429217043|ref|YP_007175033.1|	-	6.6e-20	71.5	4.7	8.4e-20	71.1	4.7	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF998)
Frag1	PF10277.9	gi|429217043|ref|YP_007175033.1|	-	0.0029	17.2	8.8	0.031	13.8	8.8	2.1	1	1	0	1	1	1	1	Frag1/DRAM/Sfk1	family
Peptidase_M50B	PF13398.6	gi|429217043|ref|YP_007175033.1|	-	0.22	11.1	8.7	0.15	11.7	6.1	2.0	1	1	0	1	1	1	0	Peptidase	M50B-like
LapA_dom	PF06305.11	gi|429217044|ref|YP_007175034.1|	-	0.15	11.9	4.2	2.5	8.0	1.3	2.4	2	0	0	2	2	2	0	Lipopolysaccharide	assembly	protein	A	domain
DUF2207	PF09972.9	gi|429217044|ref|YP_007175034.1|	-	0.15	10.8	2.4	0.2	10.4	2.4	1.2	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
m04gp34like	PF12216.8	gi|429217044|ref|YP_007175034.1|	-	0.15	11.6	0.5	0.32	10.5	0.5	1.6	1	0	0	1	1	1	0	Immune	evasion	protein
Saf_2TM	PF18303.1	gi|429217044|ref|YP_007175034.1|	-	0.44	10.1	6.5	0.71	9.4	0.2	2.3	2	1	0	2	2	2	0	SAVED-fused	2TM	effector	domain
Sigma_reg_N	PF13800.6	gi|429217044|ref|YP_007175034.1|	-	0.76	10.1	7.8	0.28	11.5	1.6	2.2	2	0	0	2	2	2	0	Sigma	factor	regulator	N-terminal
S1FA	PF04689.13	gi|429217044|ref|YP_007175034.1|	-	1	9.5	3.9	0.6	10.3	0.2	2.2	2	0	0	2	2	2	0	DNA	binding	protein	S1FA
VKOR	PF07884.14	gi|429217045|ref|YP_007175035.1|	-	1.5e-21	76.9	14.7	1.7e-21	76.7	14.7	1.0	1	0	0	1	1	1	1	Vitamin	K	epoxide	reductase	family
AA_kinase	PF00696.28	gi|429217046|ref|YP_007175036.1|	-	6.9e-32	111.0	0.4	8.2e-32	110.7	0.4	1.0	1	0	0	1	1	1	1	Amino	acid	kinase	family
Elf4	PF07011.11	gi|429217046|ref|YP_007175036.1|	-	0.31	11.0	3.5	0.17	11.8	0.3	2.3	3	0	0	3	3	3	0	Early	Flowering	4	domain
Memo	PF01875.17	gi|429217048|ref|YP_007175038.1|	-	3.8e-82	275.5	0.1	4.2e-82	275.3	0.1	1.0	1	0	0	1	1	1	1	Memo-like	protein
Thioredox_DsbH	PF03190.15	gi|429217049|ref|YP_007175039.1|	-	1.4e-62	210.5	0.2	2.8e-62	209.5	0.2	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF255
Thioredoxin_7	PF13899.6	gi|429217049|ref|YP_007175039.1|	-	5.7e-14	52.1	0.0	1.1e-13	51.2	0.0	1.5	1	0	0	1	1	1	1	Thioredoxin-like
Thioredoxin_2	PF13098.6	gi|429217049|ref|YP_007175039.1|	-	2.1e-05	24.9	0.0	6.1e-05	23.4	0.0	1.8	1	0	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin	PF00085.20	gi|429217049|ref|YP_007175039.1|	-	3.6e-05	23.7	0.1	9.2e-05	22.4	0.1	1.6	1	0	0	1	1	1	1	Thioredoxin
C5-epim_C	PF06662.13	gi|429217049|ref|YP_007175039.1|	-	0.065	12.7	1.2	0.54	9.7	0.1	2.5	2	1	0	2	2	2	0	D-glucuronyl	C5-epimerase	C-terminus
Aldo_ket_red	PF00248.21	gi|429217050|ref|YP_007175040.1|	-	1e-38	133.2	0.6	5e-38	131.0	0.6	1.8	1	1	0	1	1	1	1	Aldo/keto	reductase	family
MFS_1	PF07690.16	gi|429217051|ref|YP_007175041.1|	-	4.9e-21	75.0	52.7	4.7e-16	58.7	31.2	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
DUF1414	PF07208.11	gi|429217051|ref|YP_007175041.1|	-	0.047	13.7	2.7	0.084	12.9	0.2	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1414)
DUF2371	PF10177.9	gi|429217051|ref|YP_007175041.1|	-	0.26	11.4	6.1	4.2	7.5	0.3	2.8	2	1	0	2	2	2	0	Uncharacterised	conserved	protein	(DUF2371)
MFS_1_like	PF12832.7	gi|429217051|ref|YP_007175041.1|	-	0.43	9.4	26.9	2.5	6.9	26.9	2.0	1	1	0	1	1	1	0	MFS_1	like	family
Fer4_13	PF13370.6	gi|429217052|ref|YP_007175042.1|	-	2.7e-17	63.0	4.5	6e-17	61.9	4.5	1.5	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_15	PF13459.6	gi|429217052|ref|YP_007175042.1|	-	1e-14	55.0	1.2	1.2e-14	54.8	1.2	1.1	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_10	PF13237.6	gi|429217052|ref|YP_007175042.1|	-	0.02	15.0	1.6	0.21	11.7	1.9	2.0	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|429217052|ref|YP_007175042.1|	-	0.065	13.3	3.2	1	9.5	0.3	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4	PF00037.27	gi|429217052|ref|YP_007175042.1|	-	0.16	11.9	1.1	0.16	11.9	1.1	2.5	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|429217052|ref|YP_007175042.1|	-	0.5	11.0	4.1	3.3	8.4	4.3	2.0	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|429217052|ref|YP_007175042.1|	-	0.59	10.8	3.3	0.98	10.1	0.1	2.3	2	1	0	2	2	2	0	4Fe-4S	binding	domain
MFS_1	PF07690.16	gi|429217053|ref|YP_007175043.1|	-	1.2e-53	182.3	49.0	1.2e-53	182.3	49.0	1.7	2	0	0	2	2	2	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.24	gi|429217053|ref|YP_007175043.1|	-	4.1e-09	35.8	12.7	4.1e-09	35.8	12.7	2.6	2	1	0	2	2	2	2	Sugar	(and	other)	transporter
Hemerythrin	PF01814.23	gi|429217054|ref|YP_007175044.1|	-	1.2e-10	42.1	0.0	1.8e-10	41.6	0.0	1.3	1	0	0	1	1	1	1	Hemerythrin	HHE	cation	binding	domain
SEO_C	PF14577.6	gi|429217054|ref|YP_007175044.1|	-	0.0059	16.1	0.2	0.0086	15.5	0.2	1.3	1	1	0	1	1	1	1	Sieve	element	occlusion	C-terminus
Peptidase_C98	PF15499.6	gi|429217054|ref|YP_007175044.1|	-	0.019	14.5	0.4	0.022	14.3	0.4	1.2	1	0	0	1	1	1	0	Ubiquitin-specific	peptidase-like,	SUMO	isopeptidase
RFC1	PF08519.12	gi|429217054|ref|YP_007175044.1|	-	0.12	12.5	2.8	1.1	9.4	0.1	2.3	2	1	0	2	2	2	0	Replication	factor	RFC1	C	terminal	domain
DUF4120	PF13496.6	gi|429217054|ref|YP_007175044.1|	-	0.17	12.3	0.8	0.4	11.1	0.8	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4120)
Cloacin_immun	PF03513.14	gi|429217054|ref|YP_007175044.1|	-	0.83	10.0	5.1	0.66	10.4	0.5	2.6	1	1	2	3	3	3	0	Cloacin	immunity	protein
HHH_4	PF14490.6	gi|429217055|ref|YP_007175045.1|	-	0.0028	17.6	0.7	0.17	11.9	0.2	2.6	2	1	0	2	2	2	2	Helix-hairpin-helix	containing	domain
AIRS_C	PF02769.22	gi|429217056|ref|YP_007175046.1|	-	3.9e-20	72.6	0.0	5.5e-20	72.1	0.0	1.2	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.24	gi|429217056|ref|YP_007175046.1|	-	6e-08	33.2	0.0	1.8e-07	31.7	0.0	1.8	2	0	0	2	2	2	1	AIR	synthase	related	protein,	N-terminal	domain
Phos_pyr_kin	PF08543.12	gi|429217057|ref|YP_007175047.1|	-	2.6e-92	308.6	0.3	3.4e-92	308.3	0.3	1.1	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
ThiP_synth	PF10120.9	gi|429217057|ref|YP_007175047.1|	-	7.9e-61	204.5	0.0	1.4e-60	203.6	0.0	1.4	1	0	0	1	1	1	1	Thiamine-phosphate	synthase
PfkB	PF00294.24	gi|429217057|ref|YP_007175047.1|	-	2.2e-09	37.1	0.0	3.7e-09	36.3	0.0	1.3	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Ribosomal_L2_C	PF03947.18	gi|429217058|ref|YP_007175048.1|	-	5.5e-42	142.9	0.2	1.1e-41	142.0	0.2	1.4	2	0	0	2	2	2	1	Ribosomal	Proteins	L2,	C-terminal	domain
Ribosomal_L2	PF00181.23	gi|429217058|ref|YP_007175048.1|	-	2.8e-08	33.6	0.4	7.8e-08	32.2	0.0	2.0	2	0	0	2	2	2	1	Ribosomal	Proteins	L2,	RNA	binding	domain
RsgI_N	PF12791.7	gi|429217058|ref|YP_007175048.1|	-	0.022	14.6	0.1	0.14	12.1	0.0	2.1	2	0	0	2	2	2	0	Anti-sigma	factor	N-terminus
DUF87	PF01935.17	gi|429217059|ref|YP_007175049.1|	-	7.2e-09	36.1	0.2	7.2e-08	32.8	0.0	2.5	2	1	1	3	3	3	1	Helicase	HerA,	central	domain
AAA_10	PF12846.7	gi|429217059|ref|YP_007175049.1|	-	1.9e-06	27.1	0.1	0.079	11.9	0.0	3.1	3	0	0	3	3	3	2	AAA-like	domain
DUF853	PF05872.12	gi|429217059|ref|YP_007175049.1|	-	0.00019	20.2	0.0	0.067	11.8	0.0	2.1	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
TrwB_AAD_bind	PF10412.9	gi|429217059|ref|YP_007175049.1|	-	0.00044	19.3	0.0	0.0011	17.9	0.0	1.6	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
ResIII	PF04851.15	gi|429217059|ref|YP_007175049.1|	-	0.0006	19.9	0.0	0.0011	19.0	0.0	1.4	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
T4SS-DNA_transf	PF02534.14	gi|429217059|ref|YP_007175049.1|	-	0.0017	17.3	0.0	0.0027	16.6	0.0	1.3	1	0	0	1	1	1	1	Type	IV	secretory	system	Conjugative	DNA	transfer
AAA_22	PF13401.6	gi|429217059|ref|YP_007175049.1|	-	0.0069	16.7	0.0	0.046	14.0	0.0	2.2	1	1	0	1	1	1	1	AAA	domain
FtsK_SpoIIIE	PF01580.18	gi|429217059|ref|YP_007175049.1|	-	0.018	14.4	0.0	0.15	11.4	0.0	2.1	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
RuvB_N	PF05496.12	gi|429217059|ref|YP_007175049.1|	-	0.065	13.0	0.1	0.18	11.6	0.0	1.7	2	0	0	2	2	2	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA	PF00004.29	gi|429217059|ref|YP_007175049.1|	-	0.085	13.3	0.1	7.7	6.9	0.0	3.1	3	0	0	3	3	3	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_23	PF13476.6	gi|429217059|ref|YP_007175049.1|	-	0.092	13.2	1.5	0.73	10.3	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
ABC_tran	PF00005.27	gi|429217059|ref|YP_007175049.1|	-	0.12	12.9	0.2	0.62	10.6	0.0	2.2	2	0	0	2	2	2	0	ABC	transporter
Col_cuticle_N	PF01484.17	gi|429217060|ref|YP_007175050.1|	-	1.5	9.0	5.1	0.26	11.4	0.4	2.3	2	0	0	2	2	2	0	Nematode	cuticle	collagen	N-terminal	domain
Polysacc_deac_1	PF01522.21	gi|429217062|ref|YP_007175052.1|	-	3.1e-16	59.4	0.0	4.9e-16	58.8	0.0	1.2	1	0	0	1	1	1	1	Polysaccharide	deacetylase
Glyco_hydro_57	PF03065.15	gi|429217062|ref|YP_007175052.1|	-	0.00025	20.3	0.4	0.00061	19.1	0.4	1.7	1	1	0	1	1	1	1	Glycosyl	hydrolase	family	57
P35	PF02331.15	gi|429217062|ref|YP_007175052.1|	-	0.032	13.6	0.3	0.049	13.0	0.3	1.3	1	0	0	1	1	1	0	Apoptosis	preventing	protein
Spermine_synth	PF01564.17	gi|429217063|ref|YP_007175053.1|	-	2.5e-47	160.7	0.5	3.9e-47	160.1	0.5	1.2	1	0	0	1	1	1	1	Spermine/spermidine	synthase	domain
Methyltransf_31	PF13847.6	gi|429217063|ref|YP_007175053.1|	-	7.6e-08	32.3	0.0	1.2e-07	31.7	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Spermine_synt_N	PF17284.2	gi|429217063|ref|YP_007175053.1|	-	2.5e-07	30.5	0.1	5.6e-07	29.4	0.1	1.6	1	0	0	1	1	1	1	Spermidine	synthase	tetramerisation	domain
Methyltransf_25	PF13649.6	gi|429217063|ref|YP_007175053.1|	-	8.8e-07	29.6	0.0	1.7e-06	28.7	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_30	PF05430.11	gi|429217063|ref|YP_007175053.1|	-	1.3e-05	25.1	0.0	2.2e-05	24.3	0.0	1.4	1	0	0	1	1	1	1	S-adenosyl-L-methionine-dependent	methyltransferase
Methyltransf_11	PF08241.12	gi|429217063|ref|YP_007175053.1|	-	1.8e-05	25.3	0.0	3.3e-05	24.5	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
DUF43	PF01861.16	gi|429217063|ref|YP_007175053.1|	-	3.2e-05	23.3	0.0	6.1e-05	22.4	0.0	1.5	1	0	0	1	1	1	1	Branched-chain	polyamine	synthase	A	C-terminal	domain
Cons_hypoth95	PF03602.15	gi|429217063|ref|YP_007175053.1|	-	0.00031	20.5	0.2	0.00088	19.0	0.0	1.7	2	1	0	2	2	2	1	Conserved	hypothetical	protein	95
Methyltransf_12	PF08242.12	gi|429217063|ref|YP_007175053.1|	-	0.0016	19.1	0.2	0.0038	17.9	0.0	1.8	2	0	0	2	2	2	1	Methyltransferase	domain
MTS	PF05175.14	gi|429217063|ref|YP_007175053.1|	-	0.0023	17.5	0.0	0.0038	16.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
PRMT5	PF05185.16	gi|429217063|ref|YP_007175053.1|	-	0.0074	16.1	0.0	0.012	15.5	0.0	1.3	1	0	0	1	1	1	1	PRMT5	arginine-N-methyltransferase
Methyltransf_5	PF01795.19	gi|429217063|ref|YP_007175053.1|	-	0.018	14.6	0.0	0.027	14.0	0.0	1.2	1	0	0	1	1	1	0	MraW	methylase	family
NSP16	PF06460.12	gi|429217063|ref|YP_007175053.1|	-	0.037	13.2	2.0	0.06	12.5	2.0	1.3	1	0	0	1	1	1	0	Coronavirus	NSP16
NAD_binding_7	PF13241.6	gi|429217063|ref|YP_007175053.1|	-	0.076	13.5	0.1	0.16	12.4	0.1	1.6	1	1	0	1	1	1	0	Putative	NAD(P)-binding
UDPG_MGDP_dh_N	PF03721.14	gi|429217063|ref|YP_007175053.1|	-	0.092	12.3	1.0	0.26	10.9	1.0	1.8	1	1	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Ribosomal_S8e	PF01201.22	gi|429217064|ref|YP_007175054.1|	-	4.8e-24	85.1	3.2	5.5e-24	84.9	3.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S8e
AGOG	PF09171.10	gi|429217065|ref|YP_007175055.1|	-	2.8e-80	269.3	4.8	3.2e-80	269.0	4.8	1.0	1	0	0	1	1	1	1	N-glycosylase/DNA	lyase
AIRS	PF00586.24	gi|429217066|ref|YP_007175056.1|	-	2.6e-05	24.8	0.0	4.2e-05	24.1	0.0	1.3	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
Prenyltransf	PF01255.19	gi|429217067|ref|YP_007175057.1|	-	1.1e-50	172.2	1.6	4.5e-49	167.0	1.6	2.0	1	1	0	1	1	1	1	Putative	undecaprenyl	diphosphate	synthase
Glyco_tran_28_C	PF04101.16	gi|429217068|ref|YP_007175058.1|	-	0.00032	20.7	0.0	0.00068	19.7	0.0	1.6	1	0	0	1	1	1	1	Glycosyltransferase	family	28	C-terminal	domain
RE_TdeIII	PF09520.10	gi|429217068|ref|YP_007175058.1|	-	0.00087	19.0	0.8	0.0018	18.0	0.8	1.5	1	0	0	1	1	1	1	Type	II	restriction	endonuclease,	TdeIII
DUF2584	PF10763.9	gi|429217068|ref|YP_007175058.1|	-	0.018	15.2	0.5	0.055	13.6	0.2	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2584)
MGS	PF02142.22	gi|429217068|ref|YP_007175058.1|	-	0.072	13.3	0.0	0.52	10.5	0.0	2.3	2	1	0	2	2	2	0	MGS-like	domain
Glyco_trans_1_3	PF13528.6	gi|429217068|ref|YP_007175058.1|	-	0.11	11.8	0.0	0.37	10.0	0.0	1.9	2	0	0	2	2	2	0	Glycosyl	transferase	family	1
Fumerase	PF05681.14	gi|429217069|ref|YP_007175059.1|	-	2.5e-84	282.9	0.0	2.8e-84	282.7	0.0	1.0	1	0	0	1	1	1	1	Fumarate	hydratase	(Fumerase)
Fumerase_C	PF05683.12	gi|429217070|ref|YP_007175060.1|	-	6.7e-47	159.5	0.2	8.8e-47	159.1	0.2	1.1	1	0	0	1	1	1	1	Fumarase	C-terminus
Nitro_FeMo-Co	PF02579.17	gi|429217070|ref|YP_007175060.1|	-	0.054	13.8	0.2	0.12	12.7	0.0	1.7	2	0	0	2	2	2	0	Dinitrogenase	iron-molybdenum	cofactor
KdpA	PF03814.15	gi|429217071|ref|YP_007175061.1|	-	3.2e-157	524.0	43.1	8e-157	522.7	43.1	1.5	1	1	0	1	1	1	1	Potassium-transporting	ATPase	A	subunit
Caskin-Pro-rich	PF16907.5	gi|429217071|ref|YP_007175061.1|	-	0.16	12.5	0.0	0.26	11.8	0.0	1.2	1	0	0	1	1	1	0	Proline	rich	region	of	Caskin	proteins
E1-E2_ATPase	PF00122.20	gi|429217072|ref|YP_007175062.1|	-	2.7e-38	131.3	0.1	2.7e-38	131.3	0.1	3.1	3	0	0	3	3	3	1	E1-E2	ATPase
Hydrolase	PF00702.26	gi|429217072|ref|YP_007175062.1|	-	2.3e-24	86.8	1.2	6.8e-24	85.3	1.2	1.8	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.12	gi|429217072|ref|YP_007175062.1|	-	8e-07	29.0	1.5	8e-07	29.0	1.5	3.3	4	0	0	4	4	4	1	haloacid	dehalogenase-like	hydrolase
Mesd	PF10185.9	gi|429217072|ref|YP_007175062.1|	-	0.056	13.4	0.2	0.11	12.4	0.2	1.4	1	0	0	1	1	1	0	Chaperone	for	wingless	signalling	and	trafficking	of	LDL	receptor
KdpC	PF02669.15	gi|429217073|ref|YP_007175063.1|	-	3.3e-22	79.2	2.9	2.1e-10	40.7	0.4	2.0	1	1	1	2	2	2	2	K+-transporting	ATPase,	c	chain
RuBisCO_large	PF00016.20	gi|429217073|ref|YP_007175063.1|	-	0.12	11.6	0.0	0.16	11.1	0.0	1.1	1	0	0	1	1	1	0	Ribulose	bisphosphate	carboxylase	large	chain,	catalytic	domain
UPF0051	PF01458.17	gi|429217074|ref|YP_007175064.1|	-	5.9e-30	104.6	0.1	8.1e-30	104.1	0.1	1.2	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
DUF5625	PF18539.1	gi|429217074|ref|YP_007175064.1|	-	0.014	15.7	1.3	0.25	11.6	0.2	2.6	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF5625)
DUF1499	PF07386.11	gi|429217074|ref|YP_007175064.1|	-	0.044	14.3	0.0	0.082	13.5	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1499)
SAM_DrpA	PF18255.1	gi|429217074|ref|YP_007175064.1|	-	0.058	13.7	0.5	0.21	11.9	0.3	2.0	2	0	0	2	2	2	0	DNA	processing	protein	A	sterile	alpha	motif	domain
UPF0051	PF01458.17	gi|429217075|ref|YP_007175065.1|	-	1.6e-64	217.6	0.1	2.1e-64	217.2	0.1	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
Ribosomal_S21e	PF01249.18	gi|429217075|ref|YP_007175065.1|	-	0.14	12.3	0.3	0.69	10.1	0.0	2.3	4	0	0	4	4	4	0	Ribosomal	protein	S21e
ABC_tran	PF00005.27	gi|429217076|ref|YP_007175066.1|	-	1.4e-19	70.9	0.0	2e-19	70.5	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|429217076|ref|YP_007175066.1|	-	2.2e-09	37.6	0.1	2.1e-05	24.5	0.0	2.2	2	0	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|429217076|ref|YP_007175066.1|	-	3.4e-06	26.7	0.0	0.015	14.7	0.0	2.2	1	1	1	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_13	PF13166.6	gi|429217076|ref|YP_007175066.1|	-	0.0003	19.6	0.1	0.38	9.3	0.0	2.1	2	0	0	2	2	2	2	AAA	domain
AAA_25	PF13481.6	gi|429217076|ref|YP_007175066.1|	-	0.00047	19.8	0.0	0.0089	15.6	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_29	PF13555.6	gi|429217076|ref|YP_007175066.1|	-	0.0026	17.5	0.1	0.0052	16.5	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_24	PF13479.6	gi|429217076|ref|YP_007175066.1|	-	0.0027	17.5	0.1	0.063	13.0	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
RsgA_GTPase	PF03193.16	gi|429217076|ref|YP_007175066.1|	-	0.005	16.7	0.6	0.029	14.3	0.1	2.2	2	0	0	2	2	2	1	RsgA	GTPase
AAA_14	PF13173.6	gi|429217076|ref|YP_007175066.1|	-	0.0079	16.2	0.2	0.084	12.9	0.0	2.4	2	1	1	3	3	3	1	AAA	domain
IstB_IS21	PF01695.17	gi|429217076|ref|YP_007175066.1|	-	0.013	15.2	0.0	0.022	14.5	0.0	1.3	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
T2SSE	PF00437.20	gi|429217076|ref|YP_007175066.1|	-	0.013	14.5	0.1	0.021	13.9	0.1	1.2	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA	PF00004.29	gi|429217076|ref|YP_007175066.1|	-	0.018	15.5	0.3	0.092	13.2	0.3	2.1	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_15	PF13175.6	gi|429217076|ref|YP_007175066.1|	-	0.026	14.2	0.1	0.059	13.1	0.1	1.6	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_33	PF13671.6	gi|429217076|ref|YP_007175066.1|	-	0.027	14.6	0.0	0.046	13.9	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_16	PF13191.6	gi|429217076|ref|YP_007175066.1|	-	0.031	14.6	0.0	0.052	13.9	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
Pox_A32	PF04665.12	gi|429217076|ref|YP_007175066.1|	-	0.036	13.5	0.2	7.1	6.0	0.0	2.2	2	0	0	2	2	2	0	Poxvirus	A32	protein
AAA_22	PF13401.6	gi|429217076|ref|YP_007175066.1|	-	0.049	13.9	0.0	0.21	11.9	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
Mg_chelatase	PF01078.21	gi|429217076|ref|YP_007175066.1|	-	0.055	12.9	0.0	0.082	12.3	0.0	1.2	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_18	PF13238.6	gi|429217076|ref|YP_007175066.1|	-	0.067	13.7	0.0	0.27	11.8	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
ResIII	PF04851.15	gi|429217076|ref|YP_007175066.1|	-	0.076	13.0	0.1	0.86	9.6	0.0	2.3	3	0	0	3	3	3	0	Type	III	restriction	enzyme,	res	subunit
AAA_23	PF13476.6	gi|429217076|ref|YP_007175066.1|	-	0.092	13.2	0.1	0.18	12.3	0.1	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_7	PF12775.7	gi|429217076|ref|YP_007175066.1|	-	0.14	11.6	0.0	0.21	11.1	0.0	1.2	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
NACHT	PF05729.12	gi|429217076|ref|YP_007175066.1|	-	0.17	11.8	0.0	0.31	10.9	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
HEPN	PF05168.14	gi|429217077|ref|YP_007175067.1|	-	0.0028	17.8	0.2	0.0036	17.4	0.2	1.2	1	0	0	1	1	1	1	HEPN	domain
tRNA_NucTran2_2	PF13735.6	gi|429217077|ref|YP_007175067.1|	-	0.17	11.9	0.1	1.9	8.4	0.1	2.0	2	0	0	2	2	2	0	tRNA	nucleotidyltransferase	domain	2	putative
Lyase_1	PF00206.20	gi|429217078|ref|YP_007175068.1|	-	3.8e-80	269.6	0.0	5.1e-80	269.2	0.0	1.1	1	0	0	1	1	1	1	Lyase
FumaraseC_C	PF10415.9	gi|429217078|ref|YP_007175068.1|	-	2.2e-07	31.2	0.1	1.5e-05	25.3	0.0	2.6	2	0	0	2	2	2	1	Fumarase	C	C-terminus
POC3_POC4	PF10448.9	gi|429217078|ref|YP_007175068.1|	-	0.023	14.7	0.1	0.052	13.6	0.1	1.6	1	0	0	1	1	1	0	20S	proteasome	chaperone	assembly	proteins	3	and	4
AAA_31	PF13614.6	gi|429217078|ref|YP_007175068.1|	-	0.19	11.6	6.7	1.9	8.4	1.8	2.7	1	1	1	2	2	2	0	AAA	domain
Radical_SAM	PF04055.21	gi|429217079|ref|YP_007175069.1|	-	2.2e-13	51.0	0.0	3.7e-13	50.2	0.0	1.4	1	0	0	1	1	1	1	Radical	SAM	superfamily
Rh5	PF18515.1	gi|429217079|ref|YP_007175069.1|	-	6.6	5.9	9.3	0.88	8.8	1.3	2.5	3	0	0	3	3	3	0	Rh5	coiled-coil	domain
Aldolase_II	PF00596.21	gi|429217080|ref|YP_007175070.1|	-	1.8e-34	119.3	0.0	1.9e-34	119.2	0.0	1.0	1	0	0	1	1	1	1	Class	II	Aldolase	and	Adducin	N-terminal	domain
DUF2999	PF11212.8	gi|429217081|ref|YP_007175071.1|	-	0.00062	20.0	2.3	0.0012	19.1	0.3	2.3	1	1	2	3	3	3	1	Protein	of	unknown	function	(DUF2999)
tRNA_lig_kinase	PF08303.11	gi|429217081|ref|YP_007175071.1|	-	0.092	12.8	3.4	0.083	13.0	2.3	1.5	1	1	1	2	2	2	0	tRNA	ligase	kinase	domain
HrpJ	PF07201.11	gi|429217081|ref|YP_007175071.1|	-	0.11	12.8	1.9	0.16	12.3	1.9	1.2	1	0	0	1	1	1	0	HrpJ-like	domain
Hjc	PF01870.18	gi|429217082|ref|YP_007175072.1|	-	7.8e-28	96.3	0.0	1.2e-27	95.7	0.0	1.3	1	0	0	1	1	1	1	Archaeal	holliday	junction	resolvase	(hjc)
AHJR-like	PF18743.1	gi|429217082|ref|YP_007175072.1|	-	5.3e-07	29.2	0.0	2e-06	27.3	0.0	1.9	1	1	0	1	1	1	1	REase_AHJR-like
NERD	PF08378.11	gi|429217082|ref|YP_007175072.1|	-	0.0017	18.8	0.0	0.003	18.0	0.0	1.4	1	1	0	1	1	1	1	Nuclease-related	domain
PDDEXK_10	PF07788.11	gi|429217082|ref|YP_007175072.1|	-	0.11	12.4	0.0	0.25	11.3	0.0	1.6	1	0	0	1	1	1	0	PD-(D/E)XK	nuclease	superfamily
UPF0102	PF02021.17	gi|429217082|ref|YP_007175072.1|	-	0.15	12.3	0.0	0.22	11.8	0.0	1.5	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0102
Citrate_synt	PF00285.21	gi|429217083|ref|YP_007175073.1|	-	3.1e-110	368.6	0.0	3.6e-110	368.4	0.0	1.0	1	0	0	1	1	1	1	Citrate	synthase,	C-terminal	domain
ABC2_membrane	PF01061.24	gi|429217084|ref|YP_007175074.1|	-	1.8e-26	92.9	27.8	1.8e-26	92.9	27.8	2.3	1	1	1	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.7	gi|429217084|ref|YP_007175074.1|	-	2.2e-19	69.8	33.4	2.2e-19	69.8	33.4	1.8	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.7	gi|429217084|ref|YP_007175074.1|	-	0.00027	20.3	19.6	0.00038	19.8	19.6	1.3	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC_tran	PF00005.27	gi|429217085|ref|YP_007175075.1|	-	6.8e-26	91.4	0.0	1.6e-25	90.2	0.0	1.6	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.6	gi|429217085|ref|YP_007175075.1|	-	3.8e-13	49.9	0.1	6.5e-09	36.0	0.0	2.7	3	0	0	3	3	3	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
DUF4162	PF13732.6	gi|429217085|ref|YP_007175075.1|	-	8.9e-10	39.2	1.3	2e-09	38.0	0.7	1.9	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4162)
AAA_15	PF13175.6	gi|429217085|ref|YP_007175075.1|	-	0.00016	21.5	1.3	1.1	9.0	0.1	3.0	2	1	0	3	3	3	2	AAA	ATPase	domain
KdpD	PF02702.17	gi|429217085|ref|YP_007175075.1|	-	0.0022	17.5	0.1	0.0059	16.1	0.0	1.7	1	1	1	2	2	2	1	Osmosensitive	K+	channel	His	kinase	sensor	domain
AAA_23	PF13476.6	gi|429217085|ref|YP_007175075.1|	-	0.011	16.3	0.6	0.011	16.3	0.6	1.7	2	0	0	2	2	2	0	AAA	domain
SRP54	PF00448.22	gi|429217085|ref|YP_007175075.1|	-	0.018	14.7	0.1	0.034	13.8	0.1	1.5	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
SMC_N	PF02463.19	gi|429217085|ref|YP_007175075.1|	-	0.018	14.5	0.1	3	7.2	0.0	2.2	2	0	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
DUF295	PF03478.18	gi|429217085|ref|YP_007175075.1|	-	0.022	14.3	0.0	0.046	13.3	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF295)
AAA_29	PF13555.6	gi|429217085|ref|YP_007175075.1|	-	0.036	13.8	0.1	0.068	12.9	0.1	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_30	PF13604.6	gi|429217085|ref|YP_007175075.1|	-	0.075	12.7	0.0	0.13	11.9	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
AAA_22	PF13401.6	gi|429217085|ref|YP_007175075.1|	-	0.095	13.0	0.3	13	6.1	0.1	2.9	2	1	0	3	3	3	0	AAA	domain
NAD_binding_2	PF03446.15	gi|429217085|ref|YP_007175075.1|	-	0.1	12.8	0.0	0.17	12.0	0.0	1.3	1	0	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
AAA_27	PF13514.6	gi|429217085|ref|YP_007175075.1|	-	0.13	11.8	0.1	0.21	11.1	0.1	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_28	PF13521.6	gi|429217085|ref|YP_007175075.1|	-	0.21	11.8	1.4	6.7	6.9	0.6	2.5	1	1	1	2	2	2	0	AAA	domain
AAA_13	PF13166.6	gi|429217085|ref|YP_007175075.1|	-	0.26	9.9	1.0	7.6	5.0	0.1	2.1	2	0	0	2	2	2	0	AAA	domain
PfkB	PF00294.24	gi|429217086|ref|YP_007175076.1|	-	3.7e-30	105.3	0.0	4.5e-30	105.0	0.0	1.0	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
OTCace_N	PF02729.21	gi|429217086|ref|YP_007175076.1|	-	0.075	13.0	0.0	0.13	12.3	0.0	1.4	1	0	0	1	1	1	0	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
T2SSE	PF00437.20	gi|429217088|ref|YP_007175078.1|	-	1.6e-13	50.4	0.0	2.7e-13	49.6	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_25	PF13481.6	gi|429217088|ref|YP_007175078.1|	-	0.00013	21.6	0.2	0.00074	19.2	0.2	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.6	gi|429217088|ref|YP_007175078.1|	-	0.00029	21.4	0.1	0.0019	18.7	0.0	2.5	3	0	0	3	3	2	1	AAA	domain
AAA_14	PF13173.6	gi|429217088|ref|YP_007175078.1|	-	0.00036	20.6	0.2	0.041	13.9	0.0	3.3	2	1	1	3	3	3	1	AAA	domain
TsaE	PF02367.17	gi|429217088|ref|YP_007175078.1|	-	0.0022	18.0	0.0	0.005	16.8	0.0	1.6	1	0	0	1	1	1	1	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
IstB_IS21	PF01695.17	gi|429217088|ref|YP_007175078.1|	-	0.0024	17.7	0.0	0.012	15.4	0.0	2.0	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
AAA_16	PF13191.6	gi|429217088|ref|YP_007175078.1|	-	0.0037	17.7	0.0	0.0061	17.0	0.0	1.3	1	0	0	1	1	1	1	AAA	ATPase	domain
Zeta_toxin	PF06414.12	gi|429217088|ref|YP_007175078.1|	-	0.0046	16.3	0.0	0.0094	15.2	0.0	1.4	1	0	0	1	1	1	1	Zeta	toxin
ABC_tran	PF00005.27	gi|429217088|ref|YP_007175078.1|	-	0.005	17.3	0.0	0.012	16.1	0.0	1.7	1	0	0	1	1	1	1	ABC	transporter
ATPase	PF06745.13	gi|429217088|ref|YP_007175078.1|	-	0.0056	16.0	1.1	0.053	12.8	0.0	2.8	2	1	1	3	3	3	1	KaiC
MeaB	PF03308.16	gi|429217088|ref|YP_007175078.1|	-	0.0061	15.6	0.0	0.015	14.3	0.0	1.6	2	0	0	2	2	2	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
Thymidylate_kin	PF02223.17	gi|429217088|ref|YP_007175078.1|	-	0.0082	15.8	0.2	0.11	12.1	0.0	2.4	1	1	1	2	2	2	1	Thymidylate	kinase
AAA	PF00004.29	gi|429217088|ref|YP_007175078.1|	-	0.0088	16.5	0.0	0.029	14.8	0.0	2.0	2	0	0	2	2	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_30	PF13604.6	gi|429217088|ref|YP_007175078.1|	-	0.0089	15.8	0.0	0.016	15.0	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_28	PF13521.6	gi|429217088|ref|YP_007175078.1|	-	0.012	15.9	0.1	0.034	14.4	0.1	1.8	2	0	0	2	2	2	0	AAA	domain
NTPase_1	PF03266.15	gi|429217088|ref|YP_007175078.1|	-	0.013	15.4	0.0	0.042	13.8	0.0	1.9	1	0	0	1	1	1	0	NTPase
RuvB_N	PF05496.12	gi|429217088|ref|YP_007175078.1|	-	0.014	15.2	0.0	0.1	12.3	0.0	2.1	2	0	0	2	2	2	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
ATP_bind_1	PF03029.17	gi|429217088|ref|YP_007175078.1|	-	0.014	15.2	0.1	0.027	14.2	0.1	1.5	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
AAA_22	PF13401.6	gi|429217088|ref|YP_007175078.1|	-	0.022	15.0	0.0	0.06	13.6	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
Fur_reg_FbpA	PF13076.6	gi|429217088|ref|YP_007175078.1|	-	0.025	14.3	0.1	0.051	13.3	0.1	1.6	1	0	0	1	1	1	0	Fur-regulated	basic	protein	A
APS_kinase	PF01583.20	gi|429217088|ref|YP_007175078.1|	-	0.038	13.9	0.1	1.2	9.0	0.0	2.4	2	0	0	2	2	2	0	Adenylylsulphate	kinase
AAA_7	PF12775.7	gi|429217088|ref|YP_007175078.1|	-	0.046	13.2	0.0	0.19	11.2	0.0	1.9	2	0	0	2	2	2	0	P-loop	containing	dynein	motor	region
KTI12	PF08433.10	gi|429217088|ref|YP_007175078.1|	-	0.05	13.1	0.0	0.13	11.7	0.0	1.7	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
AAA_5	PF07728.14	gi|429217088|ref|YP_007175078.1|	-	0.061	13.3	0.0	0.14	12.1	0.0	1.7	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_33	PF13671.6	gi|429217088|ref|YP_007175078.1|	-	0.066	13.4	0.0	0.13	12.5	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Mur_ligase_M	PF08245.12	gi|429217088|ref|YP_007175078.1|	-	0.077	13.0	0.0	0.24	11.4	0.0	1.8	2	0	0	2	2	2	0	Mur	ligase	middle	domain
NACHT	PF05729.12	gi|429217088|ref|YP_007175078.1|	-	0.077	12.9	0.1	0.15	12.0	0.1	1.4	1	0	0	1	1	1	0	NACHT	domain
Sigma54_activat	PF00158.26	gi|429217088|ref|YP_007175078.1|	-	0.085	12.6	0.0	0.18	11.5	0.0	1.5	1	0	0	1	1	1	0	Sigma-54	interaction	domain
Sigma54_activ_2	PF14532.6	gi|429217088|ref|YP_007175078.1|	-	0.12	12.5	0.0	0.34	11.0	0.0	1.8	1	0	0	1	1	1	0	Sigma-54	interaction	domain
RNA_helicase	PF00910.22	gi|429217088|ref|YP_007175078.1|	-	0.14	12.6	0.0	0.29	11.6	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
Viral_helicase1	PF01443.18	gi|429217088|ref|YP_007175078.1|	-	0.14	11.8	0.0	0.22	11.2	0.0	1.3	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
AAA_29	PF13555.6	gi|429217088|ref|YP_007175078.1|	-	0.18	11.6	0.0	0.58	9.9	0.0	1.8	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_17	PF13207.6	gi|429217088|ref|YP_007175078.1|	-	1.5	9.2	4.0	1.2	9.6	0.1	2.8	4	0	0	4	4	2	0	AAA	domain
Na_H_Exchanger	PF00999.21	gi|429217089|ref|YP_007175079.1|	-	9.9e-39	133.2	37.0	1.3e-38	132.8	37.0	1.1	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
CBS	PF00571.28	gi|429217089|ref|YP_007175079.1|	-	6.6e-09	36.1	0.5	5.4e-05	23.5	0.1	2.9	2	0	0	2	2	2	2	CBS	domain
ThiF	PF00899.21	gi|429217090|ref|YP_007175080.1|	-	1.9e-53	181.4	0.0	2.7e-53	180.8	0.0	1.1	1	0	0	1	1	1	1	ThiF	family
ApbA	PF02558.16	gi|429217090|ref|YP_007175080.1|	-	0.0041	16.8	0.1	0.025	14.2	0.0	2.0	2	0	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
UDPG_MGDP_dh_N	PF03721.14	gi|429217090|ref|YP_007175080.1|	-	0.019	14.5	0.1	0.037	13.6	0.1	1.5	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
3HCDH_N	PF02737.18	gi|429217090|ref|YP_007175080.1|	-	0.041	13.8	0.0	0.084	12.7	0.0	1.6	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_7	PF13241.6	gi|429217090|ref|YP_007175080.1|	-	0.045	14.2	0.0	0.083	13.3	0.0	1.4	1	0	0	1	1	1	0	Putative	NAD(P)-binding
Shikimate_DH	PF01488.20	gi|429217090|ref|YP_007175080.1|	-	0.11	12.5	0.0	0.11	12.5	0.0	2.0	3	0	0	3	3	3	0	Shikimate	/	quinate	5-dehydrogenase
FAD_binding_3	PF01494.19	gi|429217090|ref|YP_007175080.1|	-	0.16	11.2	0.0	0.2	10.8	0.0	1.2	1	0	0	1	1	1	0	FAD	binding	domain
Sugar_tr	PF00083.24	gi|429217091|ref|YP_007175081.1|	-	7.3e-22	77.8	39.0	1.2e-16	60.7	13.1	2.1	1	1	1	2	2	2	2	Sugar	(and	other)	transporter
MFS_1	PF07690.16	gi|429217091|ref|YP_007175081.1|	-	3.1e-19	69.1	52.1	1e-16	60.9	25.4	2.3	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
DUF443	PF04276.12	gi|429217091|ref|YP_007175081.1|	-	0.0063	16.3	9.2	0.0063	16.3	9.2	3.2	1	1	0	2	2	2	1	Protein	of	unknown	function	(DUF443)
TLV_coat	PF00429.19	gi|429217091|ref|YP_007175081.1|	-	0.49	9.0	1.0	0.76	8.4	1.0	1.2	1	0	0	1	1	1	0	ENV	polyprotein	(coat	polyprotein)
Aminotran_5	PF00266.19	gi|429217092|ref|YP_007175082.1|	-	1.3e-29	103.3	0.0	1.6e-29	103.0	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-V
PsaF	PF17550.2	gi|429217092|ref|YP_007175082.1|	-	0.013	15.0	0.5	0.031	13.8	0.1	1.8	2	0	0	2	2	2	0	Family	of	unknown	function
PALP	PF00291.25	gi|429217093|ref|YP_007175083.1|	-	6.4e-55	186.6	0.0	7.6e-55	186.4	0.0	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
HypA	PF01155.19	gi|429217093|ref|YP_007175083.1|	-	0.08	13.0	0.2	0.15	12.1	0.2	1.4	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Bac_surface_Ag	PF01103.23	gi|429217093|ref|YP_007175083.1|	-	0.13	11.8	0.1	0.17	11.4	0.1	1.1	1	0	0	1	1	1	0	Surface	antigen
RNA_POL_M_15KD	PF02150.16	gi|429217093|ref|YP_007175083.1|	-	0.74	9.7	4.2	2.6	8.0	0.2	2.6	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
Cys_rich_KTR	PF14205.6	gi|429217093|ref|YP_007175083.1|	-	6.2	6.7	5.2	25	4.8	0.3	2.6	2	0	0	2	2	2	0	Cysteine-rich	KTR
zinc_ribbon_2	PF13240.6	gi|429217093|ref|YP_007175083.1|	-	8.3	6.3	8.0	20	5.1	8.0	1.7	1	1	0	1	1	1	0	zinc-ribbon	domain
YHS	PF04945.13	gi|429217094|ref|YP_007175084.1|	-	2.1e-20	72.6	1.8	3e-20	72.0	1.8	1.2	1	0	0	1	1	1	1	YHS	domain
zf-FCS	PF06467.14	gi|429217094|ref|YP_007175084.1|	-	2.8e-05	23.9	2.7	5.1e-05	23.1	2.7	1.5	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
Arc_trans_TRASH	PF08394.10	gi|429217094|ref|YP_007175084.1|	-	0.00021	21.5	2.2	0.00033	20.9	2.2	1.3	1	0	0	1	1	1	1	Archaeal	TRASH	domain
FAP206	PF12018.8	gi|429217094|ref|YP_007175084.1|	-	0.006	16.1	0.0	0.0074	15.8	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function
E1-E2_ATPase	PF00122.20	gi|429217095|ref|YP_007175085.1|	-	4e-51	173.1	3.2	1.2e-50	171.5	3.2	1.9	1	0	0	1	1	1	1	E1-E2	ATPase
Hydrolase	PF00702.26	gi|429217095|ref|YP_007175085.1|	-	4.5e-29	102.3	0.1	1.3e-28	100.8	0.1	1.8	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HMA	PF00403.26	gi|429217095|ref|YP_007175085.1|	-	1.4e-16	60.7	5.2	5.8e-14	52.3	0.9	3.3	3	0	0	3	3	3	2	Heavy-metal-associated	domain
Hydrolase_3	PF08282.12	gi|429217095|ref|YP_007175085.1|	-	3e-05	23.9	4.3	0.0027	17.5	0.2	3.4	3	0	0	3	3	3	2	haloacid	dehalogenase-like	hydrolase
HAD_2	PF13419.6	gi|429217095|ref|YP_007175085.1|	-	0.014	15.5	0.5	3.7	7.6	0.5	3.1	1	1	0	1	1	1	0	Haloacid	dehalogenase-like	hydrolase
Thioredoxin_3	PF13192.6	gi|429217095|ref|YP_007175085.1|	-	2.4	8.3	6.4	1.1	9.4	0.4	3.0	3	0	0	3	3	3	0	Thioredoxin	domain
T2SSE	PF00437.20	gi|429217096|ref|YP_007175086.1|	-	1.1e-27	96.8	0.2	3.2e-27	95.3	0.0	1.7	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
Intein_splicing	PF14890.6	gi|429217096|ref|YP_007175086.1|	-	4.5e-06	26.7	1.3	7.8e-06	25.9	1.3	1.4	1	0	0	1	1	1	1	Intein	splicing	domain
ABC_tran	PF00005.27	gi|429217096|ref|YP_007175086.1|	-	0.0014	19.1	0.1	0.013	16.0	0.0	2.3	1	1	0	2	2	2	1	ABC	transporter
AAA_22	PF13401.6	gi|429217096|ref|YP_007175086.1|	-	0.012	15.9	0.0	0.025	14.8	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_29	PF13555.6	gi|429217096|ref|YP_007175086.1|	-	0.016	14.9	0.1	0.031	14.0	0.1	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
Zeta_toxin	PF06414.12	gi|429217096|ref|YP_007175086.1|	-	0.017	14.4	0.0	0.035	13.4	0.0	1.6	1	0	0	1	1	1	0	Zeta	toxin
AAA_23	PF13476.6	gi|429217096|ref|YP_007175086.1|	-	0.031	14.8	0.5	0.031	14.8	0.5	2.6	2	1	0	2	2	2	0	AAA	domain
SporV_AA	PF12164.8	gi|429217096|ref|YP_007175086.1|	-	0.041	14.3	0.3	6	7.3	0.1	3.3	2	1	1	3	3	3	0	Stage	V	sporulation	protein	AA
CHASE9	PF17153.4	gi|429217096|ref|YP_007175086.1|	-	0.088	13.0	3.5	0.19	11.9	0.2	2.5	1	1	1	2	2	2	0	Periplasmic	sensor	domain,	extracellular
T2SSF	PF00482.23	gi|429217097|ref|YP_007175087.1|	-	4.8e-09	36.2	0.1	0.00018	21.4	0.3	4.9	5	0	0	5	5	5	2	Type	II	secretion	system	(T2SS),	protein	F
PBP	PF01161.20	gi|429217098|ref|YP_007175088.1|	-	6.8e-35	120.3	0.0	8.6e-35	119.9	0.0	1.0	1	0	0	1	1	1	1	Phosphatidylethanolamine-binding	protein
Rhodanese	PF00581.20	gi|429217100|ref|YP_007175090.1|	-	7.4e-41	139.0	0.2	4.4e-21	75.4	0.0	2.2	2	0	0	2	2	2	2	Rhodanese-like	domain
SIS	PF01380.22	gi|429217101|ref|YP_007175091.1|	-	2.3e-44	150.4	3.1	2.9e-27	95.1	1.4	2.6	2	0	0	2	2	2	2	SIS	domain
GATase_6	PF13522.6	gi|429217101|ref|YP_007175091.1|	-	1.3e-17	64.2	0.0	2.3e-17	63.4	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_7	PF13537.6	gi|429217101|ref|YP_007175091.1|	-	1.6e-14	53.9	0.0	4.1e-14	52.5	0.0	1.7	2	0	0	2	2	2	1	Glutamine	amidotransferase	domain
SIS_2	PF13580.6	gi|429217101|ref|YP_007175091.1|	-	5.5e-07	29.7	0.5	3.6e-06	27.0	0.1	2.3	1	1	1	2	2	2	1	SIS	domain
GATase_4	PF13230.6	gi|429217101|ref|YP_007175091.1|	-	9.9e-05	21.4	0.0	0.00016	20.7	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
NTP_transferase	PF00483.23	gi|429217102|ref|YP_007175092.1|	-	4e-16	59.3	0.0	6.2e-16	58.7	0.0	1.3	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.7	gi|429217102|ref|YP_007175092.1|	-	5.4e-12	46.4	0.0	7.4e-12	45.9	0.0	1.3	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep	PF00132.24	gi|429217102|ref|YP_007175092.1|	-	3.3e-10	39.3	13.9	0.00092	18.8	0.1	4.9	3	1	3	6	6	6	4	Bacterial	transferase	hexapeptide	(six	repeats)
IspD	PF01128.19	gi|429217102|ref|YP_007175092.1|	-	3.1e-06	27.1	0.0	5e-06	26.4	0.0	1.3	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
Fucokinase	PF07959.12	gi|429217102|ref|YP_007175092.1|	-	0.11	11.4	0.4	0.19	10.6	0.4	1.4	1	0	0	1	1	1	0	L-fucokinase
Hexapep_2	PF14602.6	gi|429217102|ref|YP_007175092.1|	-	0.4	10.5	6.3	4.3	7.2	0.8	3.9	2	1	2	4	4	4	0	Hexapeptide	repeat	of	succinyl-transferase
DUF4954	PF16314.5	gi|429217102|ref|YP_007175092.1|	-	0.72	7.9	6.2	3	5.9	6.2	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4954)
Glyco_hydro_31	PF01055.26	gi|429217103|ref|YP_007175093.1|	-	3.4e-108	362.7	0.8	4.2e-108	362.4	0.8	1.1	1	0	0	1	1	1	1	Glycosyl	hydrolases	family	31
Gal_mutarotas_2	PF13802.6	gi|429217103|ref|YP_007175093.1|	-	3.1e-14	53.0	1.5	6.6e-14	52.0	0.3	2.1	2	0	0	2	2	2	1	Galactose	mutarotase-like
Melibiase	PF02065.18	gi|429217103|ref|YP_007175093.1|	-	0.0049	15.9	0.0	0.0085	15.1	0.0	1.3	1	0	0	1	1	1	1	Melibiase
Glyco_trans_1_4	PF13692.6	gi|429217104|ref|YP_007175094.1|	-	1.7e-09	38.2	0.0	2.7e-09	37.6	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glycos_transf_1	PF00534.20	gi|429217104|ref|YP_007175094.1|	-	2.6e-09	36.9	0.1	4.8e-09	36.0	0.1	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
DUF5600	PF18150.1	gi|429217104|ref|YP_007175094.1|	-	0.00033	21.2	2.4	0.0089	16.6	0.5	2.5	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF5600)
Polysacc_synt_3	PF13440.6	gi|429217105|ref|YP_007175095.1|	-	1e-27	97.2	13.6	1e-27	97.2	13.6	1.8	2	0	0	2	2	2	1	Polysaccharide	biosynthesis	protein
Polysacc_synt	PF01943.17	gi|429217105|ref|YP_007175095.1|	-	2.6e-09	36.9	27.3	2.6e-09	36.9	27.3	2.8	2	1	1	3	3	3	1	Polysaccharide	biosynthesis	protein
Polysacc_synt_C	PF14667.6	gi|429217105|ref|YP_007175095.1|	-	0.00048	20.2	16.9	0.00048	20.2	16.9	3.9	3	1	2	5	5	5	2	Polysaccharide	biosynthesis	C-terminal	domain
MatE	PF01554.18	gi|429217105|ref|YP_007175095.1|	-	0.031	13.9	40.6	0.076	12.7	7.2	4.1	2	2	1	3	3	3	0	MatE
Glycos_transf_2	PF00535.26	gi|429217106|ref|YP_007175096.1|	-	9.2e-12	45.1	0.7	2.8e-11	43.5	0.7	1.8	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|429217106|ref|YP_007175096.1|	-	1.4e-06	28.4	0.0	2e-06	27.9	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glycos_transf_2	PF00535.26	gi|429217107|ref|YP_007175097.1|	-	3.2e-11	43.3	1.5	1.4e-10	41.2	1.5	2.0	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|429217107|ref|YP_007175097.1|	-	0.045	13.6	0.0	0.11	12.4	0.0	1.7	1	1	0	1	1	1	0	Glycosyltransferase	like	family	2
Glycos_transf_2	PF00535.26	gi|429217108|ref|YP_007175098.1|	-	9.6e-11	41.8	2.4	6.4e-10	39.1	2.4	2.0	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|429217108|ref|YP_007175098.1|	-	0.00085	19.3	0.0	0.0021	18.0	0.0	1.6	2	0	0	2	2	2	1	Glycosyltransferase	like	family	2
DUF1310	PF07006.11	gi|429217108|ref|YP_007175098.1|	-	0.0013	18.7	1.9	0.007	16.3	0.2	2.2	1	1	0	2	2	2	1	Protein	of	unknown	function	(DUF1310)
Glycos_transf_2	PF00535.26	gi|429217109|ref|YP_007175099.1|	-	9.7e-05	22.2	0.1	0.0002	21.2	0.1	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_4	PF13704.6	gi|429217109|ref|YP_007175099.1|	-	0.0045	17.5	0.0	0.01	16.3	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_trans_1_4	PF13692.6	gi|429217110|ref|YP_007175100.1|	-	2.4e-11	44.2	0.0	3.4e-11	43.7	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_2	PF13477.6	gi|429217110|ref|YP_007175100.1|	-	0.00014	21.9	0.1	0.00032	20.8	0.1	1.6	1	0	0	1	1	1	1	Glycosyl	transferase	4-like
Glyco_transf_4	PF13439.6	gi|429217110|ref|YP_007175100.1|	-	0.0011	19.0	0.0	0.0021	18.1	0.0	1.4	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glycos_transf_1	PF00534.20	gi|429217111|ref|YP_007175101.1|	-	6.8e-29	100.6	0.6	1.4e-28	99.6	0.6	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|429217111|ref|YP_007175101.1|	-	8e-22	78.1	0.0	1.4e-21	77.3	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|429217111|ref|YP_007175101.1|	-	2e-10	40.9	0.0	3.3e-10	40.2	0.0	1.4	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_transf_5	PF08323.11	gi|429217111|ref|YP_007175101.1|	-	2.6e-06	27.3	0.0	7.1e-06	25.9	0.0	1.7	1	1	0	1	1	1	1	Starch	synthase	catalytic	domain
OTCace	PF00185.24	gi|429217111|ref|YP_007175101.1|	-	0.015	15.4	0.0	0.059	13.5	0.0	1.9	2	0	0	2	2	2	0	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
PIGA	PF08288.12	gi|429217111|ref|YP_007175101.1|	-	0.017	15.7	0.0	0.73	10.5	0.0	2.8	2	1	1	3	3	3	0	PIGA	(GPI	anchor	biosynthesis)
Glyco_trans_4_4	PF13579.6	gi|429217111|ref|YP_007175101.1|	-	0.05	14.0	0.0	0.081	13.4	0.0	1.4	1	0	0	1	1	1	0	Glycosyl	transferase	4-like	domain
Methyltransf_21	PF05050.12	gi|429217112|ref|YP_007175102.1|	-	0.00017	21.7	0.1	0.0049	16.9	0.0	2.2	1	1	0	2	2	2	2	Methyltransferase	FkbM	domain
Glyco_tranf_2_3	PF13641.6	gi|429217113|ref|YP_007175103.1|	-	0.021	14.7	0.0	0.044	13.7	0.0	1.6	1	1	1	2	2	2	0	Glycosyltransferase	like	family	2
Glycos_transf_1	PF00534.20	gi|429217115|ref|YP_007175105.1|	-	1.6e-06	27.8	0.4	2.4e-05	23.9	0.4	2.2	1	1	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|429217115|ref|YP_007175105.1|	-	0.00063	20.2	0.0	0.0011	19.4	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
NAS	PF03059.16	gi|429217115|ref|YP_007175105.1|	-	0.0047	16.3	0.7	0.018	14.4	0.0	2.1	2	1	0	2	2	2	1	Nicotianamine	synthase	protein
Glyco_transf_4	PF13439.6	gi|429217115|ref|YP_007175105.1|	-	0.15	12.0	0.0	0.25	11.4	0.0	1.3	1	0	0	1	1	1	0	Glycosyltransferase	Family	4
DUF202	PF02656.15	gi|429217116|ref|YP_007175106.1|	-	3.9	8.0	0.0	3.9	8.0	0.0	4.7	5	2	0	5	5	5	0	Domain	of	unknown	function	(DUF202)
DUF58	PF01882.18	gi|429217117|ref|YP_007175107.1|	-	5e-09	36.3	0.1	8.7e-09	35.6	0.1	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF58
AAA_3	PF07726.11	gi|429217118|ref|YP_007175108.1|	-	4.5e-52	175.3	0.0	6.5e-52	174.8	0.0	1.2	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_lid_2	PF17863.1	gi|429217118|ref|YP_007175108.1|	-	8.8e-13	47.9	0.0	1.5e-12	47.1	0.0	1.3	1	0	0	1	1	1	1	AAA	lid	domain
AAA_5	PF07728.14	gi|429217118|ref|YP_007175108.1|	-	3.1e-12	46.6	0.0	4.9e-12	46.0	0.0	1.4	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA	PF00004.29	gi|429217118|ref|YP_007175108.1|	-	4.5e-07	30.4	0.0	7.7e-07	29.6	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.12	gi|429217118|ref|YP_007175108.1|	-	9.6e-06	25.4	0.0	0.00098	18.9	0.0	2.2	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
MCM	PF00493.23	gi|429217118|ref|YP_007175108.1|	-	1.2e-05	24.5	0.0	2.3e-05	23.6	0.0	1.4	1	0	0	1	1	1	1	MCM	P-loop	domain
Sigma54_activat	PF00158.26	gi|429217118|ref|YP_007175108.1|	-	0.00067	19.4	0.1	0.012	15.3	0.1	2.1	1	1	0	1	1	1	1	Sigma-54	interaction	domain
AAA_16	PF13191.6	gi|429217118|ref|YP_007175108.1|	-	0.0016	18.9	0.4	0.044	14.2	0.0	2.4	3	0	0	3	3	2	1	AAA	ATPase	domain
AAA_18	PF13238.6	gi|429217118|ref|YP_007175108.1|	-	0.0059	17.2	0.0	0.019	15.5	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
TIP49	PF06068.13	gi|429217118|ref|YP_007175108.1|	-	0.016	14.5	0.3	0.029	13.6	0.0	1.5	2	0	0	2	2	2	0	TIP49	P-loop	domain
TsaE	PF02367.17	gi|429217118|ref|YP_007175108.1|	-	0.016	15.2	0.1	0.028	14.4	0.1	1.3	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
Mg_chelatase	PF01078.21	gi|429217118|ref|YP_007175108.1|	-	0.023	14.1	0.1	1.1	8.6	0.0	2.2	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
AAA_2	PF07724.14	gi|429217118|ref|YP_007175108.1|	-	0.032	14.3	0.0	0.055	13.6	0.0	1.3	1	0	0	1	1	1	0	AAA	domain	(Cdc48	subfamily)
AAA_lid_8	PF17868.1	gi|429217118|ref|YP_007175108.1|	-	0.046	13.6	0.2	0.15	12.0	0.1	2.0	2	1	0	2	2	2	0	AAA	lid	domain
HlyD	PF00529.20	gi|429217118|ref|YP_007175108.1|	-	0.066	13.1	0.0	0.11	12.3	0.0	1.7	1	1	0	1	1	1	0	HlyD	membrane-fusion	protein	of	T1SS
AAA_14	PF13173.6	gi|429217118|ref|YP_007175108.1|	-	0.12	12.5	0.0	0.32	11.0	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
CarbopepD_reg_2	PF13715.6	gi|429217120|ref|YP_007175110.1|	-	1.1e-05	25.4	1.4	0.3	11.1	0.1	3.4	3	0	0	3	3	3	2	CarboxypepD_reg-like	domain
CarboxypepD_reg	PF13620.6	gi|429217120|ref|YP_007175110.1|	-	0.00051	20.3	0.0	0.5	10.7	0.0	3.2	3	0	0	3	3	3	1	Carboxypeptidase	regulatory-like	domain
LsmAD	PF06741.13	gi|429217120|ref|YP_007175110.1|	-	0.018	15.6	0.3	0.057	14.0	0.3	1.9	1	0	0	1	1	1	0	LsmAD	domain
fn3_3	PF14686.6	gi|429217120|ref|YP_007175110.1|	-	0.038	13.8	0.4	0.13	12.1	0.1	2.0	2	0	0	2	2	2	0	Polysaccharide	lyase	family	4,	domain	II
UPF0542	PF15086.6	gi|429217120|ref|YP_007175110.1|	-	0.071	13.0	0.0	0.19	11.7	0.0	1.7	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0542
Big_7	PF17957.1	gi|429217120|ref|YP_007175110.1|	-	0.39	11.5	10.7	3.4	8.5	0.4	3.7	3	0	0	3	3	3	0	Bacterial	Ig	domain
DUF3139	PF11337.8	gi|429217121|ref|YP_007175111.1|	-	6.1	7.6	7.8	2	9.1	1.4	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3139)
DUF1616	PF07760.11	gi|429217123|ref|YP_007175113.1|	-	5.6e-17	62.1	8.4	8.1e-17	61.5	8.4	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1616)
DUF1616	PF07760.11	gi|429217124|ref|YP_007175114.1|	-	2.8e-05	23.6	0.1	3.3e-05	23.4	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1616)
GBS_Bsp-like	PF08481.10	gi|429217124|ref|YP_007175114.1|	-	0.032	14.3	0.8	0.071	13.2	0.3	1.7	2	0	0	2	2	2	0	GBS	Bsp-like	repeat
SmpB	PF01668.18	gi|429217124|ref|YP_007175114.1|	-	0.17	11.7	0.1	0.25	11.2	0.1	1.2	1	0	0	1	1	1	0	SmpB	protein
DUF3394	PF11874.8	gi|429217125|ref|YP_007175115.1|	-	0.14	11.9	0.2	0.26	11.0	0.2	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3394)
AI-2E_transport	PF01594.16	gi|429217125|ref|YP_007175115.1|	-	6.2	5.9	11.3	30	3.6	11.3	1.8	1	1	0	1	1	1	0	AI-2E	family	transporter
Glycos_transf_2	PF00535.26	gi|429217126|ref|YP_007175116.1|	-	1.2e-29	103.3	0.4	2e-29	102.6	0.4	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|429217126|ref|YP_007175116.1|	-	5.9e-19	68.9	0.0	1.2e-18	67.9	0.0	1.4	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.9	gi|429217126|ref|YP_007175116.1|	-	1e-07	31.7	0.3	1.6e-07	31.1	0.3	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|429217126|ref|YP_007175116.1|	-	0.0011	19.5	0.2	0.0025	18.3	0.2	1.6	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.6	gi|429217126|ref|YP_007175116.1|	-	0.0029	17.1	0.0	0.0073	15.8	0.0	1.6	1	1	0	1	1	1	1	Glycosyl	transferase	family	21
DUF374	PF04028.13	gi|429217126|ref|YP_007175116.1|	-	0.013	15.1	0.0	0.027	14.0	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF374)
YflT	PF11181.8	gi|429217126|ref|YP_007175116.1|	-	0.017	15.6	2.0	0.081	13.4	1.2	2.3	2	0	0	2	2	2	0	Heat	induced	stress	protein	YflT
COX5A	PF02284.16	gi|429217126|ref|YP_007175116.1|	-	0.027	14.5	0.0	0.06	13.4	0.0	1.5	1	0	0	1	1	1	0	Cytochrome	c	oxidase	subunit	Va
Peptidase_U57	PF05582.12	gi|429217126|ref|YP_007175116.1|	-	0.047	13.0	1.1	0.074	12.3	1.1	1.3	1	0	0	1	1	1	0	YabG	peptidase	U57
TcpE	PF12648.7	gi|429217126|ref|YP_007175116.1|	-	3	8.4	11.8	0.43	11.2	7.1	1.9	2	0	0	2	2	2	0	TcpE	family
ABC_tran	PF00005.27	gi|429217127|ref|YP_007175117.1|	-	4.8e-31	108.1	0.5	6.2e-31	107.7	0.5	1.1	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|429217127|ref|YP_007175117.1|	-	3.7e-08	33.5	1.2	4.9e-06	26.6	0.4	2.2	1	1	1	2	2	2	1	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_15	PF13175.6	gi|429217127|ref|YP_007175117.1|	-	8.5e-06	25.7	0.1	1.4e-05	25.0	0.1	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
ATPase_2	PF01637.18	gi|429217127|ref|YP_007175117.1|	-	0.0003	20.8	5.0	0.00041	20.3	4.9	1.5	1	1	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
AAA_13	PF13166.6	gi|429217127|ref|YP_007175117.1|	-	0.00049	18.9	0.5	0.00084	18.1	0.5	1.4	1	0	0	1	1	1	1	AAA	domain
RecA	PF00154.21	gi|429217127|ref|YP_007175117.1|	-	0.00065	19.2	0.0	0.0013	18.3	0.0	1.4	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
SMC_N	PF02463.19	gi|429217127|ref|YP_007175117.1|	-	0.0014	18.2	6.1	0.12	11.8	6.1	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_14	PF13173.6	gi|429217127|ref|YP_007175117.1|	-	0.0065	16.5	1.8	0.017	15.2	0.2	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_29	PF13555.6	gi|429217127|ref|YP_007175117.1|	-	0.0085	15.8	0.0	0.017	14.9	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.6	gi|429217127|ref|YP_007175117.1|	-	0.0088	16.6	7.6	0.034	14.6	7.6	2.0	1	1	0	1	1	1	1	AAA	domain
G-alpha	PF00503.20	gi|429217127|ref|YP_007175117.1|	-	0.025	13.7	1.8	0.031	13.4	1.8	1.1	1	0	0	1	1	1	0	G-protein	alpha	subunit
Rad17	PF03215.15	gi|429217127|ref|YP_007175117.1|	-	0.027	14.4	1.1	0.067	13.1	0.3	1.8	1	1	1	2	2	2	0	Rad17	P-loop	domain
NACHT	PF05729.12	gi|429217127|ref|YP_007175117.1|	-	0.029	14.3	0.0	0.046	13.6	0.0	1.3	1	0	0	1	1	1	0	NACHT	domain
AAA	PF00004.29	gi|429217127|ref|YP_007175117.1|	-	0.033	14.6	0.4	0.28	11.6	0.4	2.3	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
NB-ARC	PF00931.22	gi|429217127|ref|YP_007175117.1|	-	0.04	13.1	0.1	0.075	12.2	0.1	1.4	1	0	0	1	1	1	0	NB-ARC	domain
AAA_16	PF13191.6	gi|429217127|ref|YP_007175117.1|	-	0.046	14.1	0.0	0.062	13.7	0.0	1.3	1	1	0	1	1	1	0	AAA	ATPase	domain
SbcCD_C	PF13558.6	gi|429217127|ref|YP_007175117.1|	-	0.046	14.0	0.2	0.81	10.0	0.2	2.2	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
ABC_ATPase	PF09818.9	gi|429217127|ref|YP_007175117.1|	-	0.05	12.4	0.3	1.6	7.4	0.3	2.1	2	0	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
AAA_24	PF13479.6	gi|429217127|ref|YP_007175117.1|	-	0.054	13.2	0.3	0.059	13.1	0.3	1.4	1	1	0	1	1	1	0	AAA	domain
RsgA_GTPase	PF03193.16	gi|429217127|ref|YP_007175117.1|	-	0.063	13.2	0.2	0.12	12.3	0.2	1.6	1	0	0	1	1	1	0	RsgA	GTPase
AAA_33	PF13671.6	gi|429217127|ref|YP_007175117.1|	-	0.088	13.0	0.0	0.36	11.0	0.0	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_30	PF13604.6	gi|429217127|ref|YP_007175117.1|	-	0.097	12.4	0.0	0.2	11.4	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_18	PF13238.6	gi|429217127|ref|YP_007175117.1|	-	0.11	13.1	1.5	0.19	12.3	0.7	1.9	1	1	1	2	2	2	0	AAA	domain
AAA_7	PF12775.7	gi|429217127|ref|YP_007175117.1|	-	0.11	12.0	0.2	0.18	11.3	0.2	1.3	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
DUF3584	PF12128.8	gi|429217127|ref|YP_007175117.1|	-	0.11	9.9	0.3	0.15	9.6	0.3	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
DUF2663	PF10864.8	gi|429217128|ref|YP_007175118.1|	-	0.028	14.8	2.2	0.028	14.8	2.2	3.6	2	2	1	3	3	3	0	Protein	of	unknown	function	(DUF2663)
PHP	PF02811.19	gi|429217129|ref|YP_007175119.1|	-	0.0054	17.1	0.0	0.008	16.5	0.0	1.4	1	1	0	1	1	1	1	PHP	domain
FtsX	PF02687.21	gi|429217130|ref|YP_007175120.1|	-	0.0029	18.0	11.2	0.0029	18.0	11.2	3.3	3	1	0	3	3	3	1	FtsX-like	permease	family
dTDP_sugar_isom	PF00908.17	gi|429217131|ref|YP_007175121.1|	-	9.9e-71	236.9	0.0	1.1e-70	236.7	0.0	1.0	1	0	0	1	1	1	1	dTDP-4-dehydrorhamnose	3,5-epimerase
FdtA	PF05523.11	gi|429217131|ref|YP_007175121.1|	-	0.0036	17.0	0.0	0.0054	16.5	0.0	1.3	1	0	0	1	1	1	1	WxcM-like,	C-terminal
DUF4738	PF15889.5	gi|429217131|ref|YP_007175121.1|	-	0.014	15.2	0.4	0.027	14.3	0.3	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4738)
MID_MedPIWI	PF18296.1	gi|429217131|ref|YP_007175121.1|	-	0.055	13.3	0.0	0.055	13.3	0.0	1.2	1	0	0	1	1	1	0	MID	domain	of	medPIWI
NTP_transferase	PF00483.23	gi|429217132|ref|YP_007175122.1|	-	3.3e-50	171.0	0.0	4.2e-50	170.6	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.7	gi|429217132|ref|YP_007175122.1|	-	6.8e-10	39.5	0.0	9e-10	39.1	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep	PF00132.24	gi|429217132|ref|YP_007175122.1|	-	7.3e-06	25.5	11.1	0.044	13.5	0.6	4.1	2	2	1	3	3	3	3	Bacterial	transferase	hexapeptide	(six	repeats)
Fucokinase	PF07959.12	gi|429217132|ref|YP_007175122.1|	-	0.00049	19.1	4.1	0.0011	18.0	4.1	1.6	1	1	0	1	1	1	1	L-fucokinase
GDP_Man_Dehyd	PF16363.5	gi|429217133|ref|YP_007175123.1|	-	2e-74	251.0	0.0	2.3e-74	250.8	0.0	1.0	1	0	0	1	1	1	1	GDP-mannose	4,6	dehydratase
Epimerase	PF01370.21	gi|429217133|ref|YP_007175123.1|	-	3.4e-54	183.8	0.0	4.2e-54	183.6	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
3Beta_HSD	PF01073.19	gi|429217133|ref|YP_007175123.1|	-	9.1e-17	61.0	0.2	1.2e-16	60.5	0.2	1.2	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
RmlD_sub_bind	PF04321.17	gi|429217133|ref|YP_007175123.1|	-	1.5e-14	53.8	0.0	1.8e-14	53.5	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
NAD_binding_4	PF07993.12	gi|429217133|ref|YP_007175123.1|	-	2.2e-13	50.0	0.1	1.9e-11	43.6	0.1	2.6	1	1	0	1	1	1	1	Male	sterility	protein
Polysacc_synt_2	PF02719.15	gi|429217133|ref|YP_007175123.1|	-	1.3e-09	37.6	0.2	6.3e-09	35.4	0.2	2.0	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
KR	PF08659.10	gi|429217133|ref|YP_007175123.1|	-	4e-05	23.6	0.0	7.5e-05	22.7	0.0	1.3	1	0	0	1	1	1	1	KR	domain
Sacchrp_dh_NADP	PF03435.18	gi|429217133|ref|YP_007175123.1|	-	0.017	15.4	0.0	0.029	14.6	0.0	1.4	1	0	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
Pallilysin	PF18663.1	gi|429217133|ref|YP_007175123.1|	-	0.057	13.4	0.2	0.057	13.4	0.2	1.8	3	0	0	3	3	3	0	Pallilysin	beta	barrel	domain
NAD_binding_10	PF13460.6	gi|429217133|ref|YP_007175123.1|	-	0.083	12.8	0.0	0.15	12.0	0.0	1.4	1	0	0	1	1	1	0	NAD(P)H-binding
RmlD_sub_bind	PF04321.17	gi|429217134|ref|YP_007175124.1|	-	3.1e-58	197.1	0.0	3.7e-58	196.9	0.0	1.0	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Epimerase	PF01370.21	gi|429217134|ref|YP_007175124.1|	-	3.3e-24	85.7	0.1	5.2e-24	85.0	0.1	1.3	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
GDP_Man_Dehyd	PF16363.5	gi|429217134|ref|YP_007175124.1|	-	1.6e-12	47.5	0.0	2.4e-12	46.9	0.0	1.4	1	0	0	1	1	1	1	GDP-mannose	4,6	dehydratase
Polysacc_synt_2	PF02719.15	gi|429217134|ref|YP_007175124.1|	-	2.2e-09	36.9	0.9	7e-09	35.2	0.3	2.0	2	1	0	2	2	2	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.12	gi|429217134|ref|YP_007175124.1|	-	1.2e-05	24.6	0.2	3e-05	23.3	0.2	1.6	1	1	0	1	1	1	1	Male	sterility	protein
Glycos_transf_1	PF00534.20	gi|429217135|ref|YP_007175125.1|	-	4.1e-10	39.5	0.1	8.9e-10	38.4	0.1	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|429217135|ref|YP_007175125.1|	-	5.7e-10	39.8	0.0	8.6e-10	39.2	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
DUF5600	PF18150.1	gi|429217135|ref|YP_007175125.1|	-	0.0028	18.2	3.5	0.051	14.2	1.0	2.6	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF5600)
DUF4201	PF13870.6	gi|429217135|ref|YP_007175125.1|	-	0.14	11.8	3.2	0.091	12.5	0.4	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4201)
Phosphodiest	PF01663.22	gi|429217136|ref|YP_007175126.1|	-	1.7e-20	73.9	0.0	2.3e-20	73.5	0.0	1.1	1	0	0	1	1	1	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
BPD_transp_1	PF00528.22	gi|429217137|ref|YP_007175127.1|	-	1.4e-13	51.0	26.3	1.4e-13	51.0	26.3	2.3	1	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.22	gi|429217138|ref|YP_007175128.1|	-	2.1e-08	34.2	30.2	2.1e-08	34.2	30.2	2.2	1	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
SBP_bac_1	PF01547.25	gi|429217139|ref|YP_007175129.1|	-	5.5e-09	36.4	10.6	5.5e-09	36.4	10.6	1.7	1	1	1	2	2	2	1	Bacterial	extracellular	solute-binding	protein
DUF5518	PF17647.1	gi|429217139|ref|YP_007175129.1|	-	0.025	14.7	4.5	0.16	12.1	4.1	2.3	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5518)
AJAP1_PANP_C	PF15298.6	gi|429217139|ref|YP_007175129.1|	-	0.59	10.3	9.6	1	9.5	9.6	1.3	1	0	0	1	1	1	0	AJAP1/PANP	C-terminus
GalP_UDP_transf	PF01087.22	gi|429217140|ref|YP_007175130.1|	-	5e-22	79.2	0.0	1.7e-21	77.5	0.0	1.8	1	1	0	1	1	1	1	Galactose-1-phosphate	uridyl	transferase,	N-terminal	domain
GalP_UDP_tr_C	PF02744.17	gi|429217140|ref|YP_007175130.1|	-	5.8e-17	61.9	0.2	9.1e-17	61.3	0.2	1.2	1	0	0	1	1	1	1	Galactose-1-phosphate	uridyl	transferase,	C-terminal	domain
DcpS_C	PF11969.8	gi|429217140|ref|YP_007175130.1|	-	0.00025	21.5	1.1	0.004	17.6	0.3	2.3	2	0	0	2	2	2	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
DUF4921	PF16268.5	gi|429217140|ref|YP_007175130.1|	-	0.00049	19.0	0.1	0.00069	18.6	0.1	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4921)
HIT	PF01230.23	gi|429217140|ref|YP_007175130.1|	-	0.028	15.1	0.0	0.78	10.5	0.0	2.3	2	0	0	2	2	2	0	HIT	domain
GalKase_gal_bdg	PF10509.9	gi|429217141|ref|YP_007175131.1|	-	1.2e-14	53.6	0.1	3.2e-14	52.2	0.1	1.7	1	0	0	1	1	1	1	Galactokinase	galactose-binding	signature
GHMP_kinases_N	PF00288.26	gi|429217141|ref|YP_007175131.1|	-	2e-13	50.4	0.3	4.1e-12	46.1	0.0	2.6	3	0	0	3	3	3	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.13	gi|429217141|ref|YP_007175131.1|	-	5.1e-13	49.2	0.1	9.3e-13	48.4	0.1	1.4	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
ABC_tran	PF00005.27	gi|429217142|ref|YP_007175132.1|	-	9.2e-31	107.2	0.0	1.8e-30	106.2	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
GlcV_C_terminal	PF17847.1	gi|429217142|ref|YP_007175132.1|	-	2e-30	105.0	3.6	2.2e-30	104.9	2.3	1.8	2	0	0	2	2	2	1	Glucose	ABC	transporter	C-terminal	domain
AAA_21	PF13304.6	gi|429217142|ref|YP_007175132.1|	-	9.6e-08	32.2	0.1	0.0036	17.2	0.0	2.7	3	0	0	3	3	3	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
OB_MalK	PF17912.1	gi|429217142|ref|YP_007175132.1|	-	0.0025	18.6	1.1	0.01	16.7	0.8	2.3	2	0	0	2	2	2	1	MalK	OB	fold	domain
SbcCD_C	PF13558.6	gi|429217142|ref|YP_007175132.1|	-	0.012	15.9	0.1	0.029	14.6	0.1	1.7	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
CysA_C_terminal	PF17850.1	gi|429217142|ref|YP_007175132.1|	-	0.027	15.0	0.0	0.13	12.8	0.0	2.2	2	0	0	2	2	2	0	CysA	C-terminal	regulatory	domain
AAA	PF00004.29	gi|429217142|ref|YP_007175132.1|	-	0.034	14.6	0.0	0.3	11.5	0.0	2.3	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_29	PF13555.6	gi|429217142|ref|YP_007175132.1|	-	0.088	12.6	0.0	0.2	11.4	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.6	gi|429217142|ref|YP_007175132.1|	-	0.1	13.1	1.4	0.19	12.2	0.2	2.0	2	0	0	2	2	2	0	AAA	domain
Glycos_transf_2	PF00535.26	gi|429217143|ref|YP_007175133.1|	-	1.8e-15	57.1	1.6	1.8e-15	57.1	1.6	1.7	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|429217143|ref|YP_007175133.1|	-	6.3e-05	23.0	0.0	9.7e-05	22.4	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
HTH_24	PF13412.6	gi|429217143|ref|YP_007175133.1|	-	0.0014	18.2	2.0	0.0032	17.0	2.0	1.7	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
DASH_Dad1	PF08649.10	gi|429217143|ref|YP_007175133.1|	-	0.55	10.5	5.3	0.12	12.6	0.6	2.5	2	0	0	2	2	2	0	DASH	complex	subunit	Dad1
Glycos_transf_1	PF00534.20	gi|429217144|ref|YP_007175134.1|	-	5.3e-19	68.4	0.3	8.8e-19	67.7	0.3	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|429217144|ref|YP_007175134.1|	-	1e-11	45.4	0.0	1.6e-11	44.8	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
ALG11_N	PF15924.5	gi|429217144|ref|YP_007175134.1|	-	0.0011	19.1	0.9	0.28	11.2	0.0	3.5	2	1	1	3	3	3	1	ALG11	mannosyltransferase	N-terminus
Glyco_transf_4	PF13439.6	gi|429217144|ref|YP_007175134.1|	-	0.0022	18.0	0.0	0.0072	16.3	0.0	1.9	2	1	0	2	2	2	1	Glycosyltransferase	Family	4
Glycos_transf_2	PF00535.26	gi|429217145|ref|YP_007175135.1|	-	2.6e-17	63.2	0.4	4.7e-17	62.3	0.3	1.5	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|429217145|ref|YP_007175135.1|	-	2.6e-07	30.8	0.0	3.3e-07	30.4	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
ThrE_2	PF12821.7	gi|429217145|ref|YP_007175135.1|	-	0.0035	17.5	0.6	0.0064	16.6	0.6	1.4	1	0	0	1	1	1	1	Threonine/Serine	exporter,	ThrE
Glyco_transf_21	PF13506.6	gi|429217145|ref|YP_007175135.1|	-	0.0059	16.1	0.0	0.0092	15.5	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
ResB	PF05140.14	gi|429217145|ref|YP_007175135.1|	-	0.041	12.6	0.0	0.1	11.3	0.0	1.4	1	1	0	1	1	1	0	ResB-like	family
DUF5442	PF17514.2	gi|429217145|ref|YP_007175135.1|	-	0.09	13.0	1.3	5.8	7.2	0.2	2.4	1	1	1	2	2	2	0	Family	of	unknown	function	(DUF5442)
SBP_bac_5	PF00496.22	gi|429217146|ref|YP_007175136.1|	-	8e-44	150.1	5.3	1.9e-43	148.9	5.3	1.6	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
PKD	PF00801.20	gi|429217146|ref|YP_007175136.1|	-	1.1e-06	28.4	0.6	1.1e-06	28.4	0.6	4.4	4	0	0	4	4	4	2	PKD	domain
Shisa	PF13908.6	gi|429217146|ref|YP_007175136.1|	-	1	9.5	4.0	2	8.6	4.0	1.4	1	0	0	1	1	1	0	Wnt	and	FGF	inhibitory	regulator
MFS_1	PF07690.16	gi|429217147|ref|YP_007175137.1|	-	2.9e-40	138.3	53.2	2.9e-40	138.3	53.2	2.6	1	1	0	2	2	2	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.24	gi|429217147|ref|YP_007175137.1|	-	1.2e-05	24.4	13.5	1.2e-05	24.4	13.5	2.9	3	0	0	3	3	3	2	Sugar	(and	other)	transporter
MFS_3	PF05977.13	gi|429217147|ref|YP_007175137.1|	-	0.0029	16.1	3.3	0.0029	16.1	3.3	3.2	2	1	1	3	3	3	2	Transmembrane	secretion	effector
DUF89	PF01937.19	gi|429217148|ref|YP_007175138.1|	-	6.8e-14	51.6	6.9	6e-12	45.2	3.5	2.9	1	1	1	2	2	2	2	Protein	of	unknown	function	DUF89
Aminotran_5	PF00266.19	gi|429217149|ref|YP_007175139.1|	-	3.6e-25	88.7	0.0	4.1e-25	88.5	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-V
Band_7_C	PF16200.5	gi|429217149|ref|YP_007175139.1|	-	0.0084	16.1	0.1	0.026	14.6	0.0	1.8	2	0	0	2	2	2	1	C-terminal	region	of	band_7
Shikimate_DH	PF01488.20	gi|429217149|ref|YP_007175139.1|	-	0.018	15.1	0.5	0.29	11.2	0.1	2.9	3	1	1	4	4	4	0	Shikimate	/	quinate	5-dehydrogenase
2-Hacid_dh_C	PF02826.19	gi|429217150|ref|YP_007175140.1|	-	4.5e-54	182.5	0.1	7.2e-54	181.8	0.1	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.30	gi|429217150|ref|YP_007175140.1|	-	3.7e-26	91.4	0.0	4.7e-26	91.0	0.0	1.1	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
AdoHcyase_NAD	PF00670.21	gi|429217150|ref|YP_007175140.1|	-	0.00031	20.8	0.1	0.00056	20.0	0.1	1.4	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
DUF3206	PF11472.8	gi|429217150|ref|YP_007175140.1|	-	0.011	15.7	0.0	0.025	14.6	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3206)
ELFV_dehydrog	PF00208.21	gi|429217150|ref|YP_007175140.1|	-	0.013	15.3	0.1	0.022	14.5	0.1	1.4	1	0	0	1	1	1	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
NAD_binding_2	PF03446.15	gi|429217150|ref|YP_007175140.1|	-	0.022	14.9	0.4	0.093	12.9	0.1	2.2	3	0	0	3	3	3	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
IlvN	PF07991.12	gi|429217150|ref|YP_007175140.1|	-	0.027	14.1	0.1	0.099	12.2	0.0	1.9	2	0	0	2	2	2	0	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
AlaDh_PNT_C	PF01262.21	gi|429217150|ref|YP_007175140.1|	-	0.028	13.7	0.1	0.1	11.9	0.1	2.1	2	1	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
Gp_dh_N	PF00044.24	gi|429217150|ref|YP_007175140.1|	-	0.03	14.7	0.6	0.064	13.6	0.6	1.7	1	1	0	1	1	1	0	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
Diphthami_syn_2	PF01902.17	gi|429217151|ref|YP_007175141.1|	-	5.5e-31	107.8	0.0	6.3e-31	107.6	0.0	1.0	1	0	0	1	1	1	1	Diphthamide	synthase
Acetyltransf_1	PF00583.25	gi|429217152|ref|YP_007175142.1|	-	3e-05	24.2	0.2	0.00013	22.2	0.1	1.9	1	1	1	2	2	2	1	Acetyltransferase	(GNAT)	family
GNAT_acetyltran	PF12746.7	gi|429217152|ref|YP_007175142.1|	-	3.6e-05	23.5	0.1	4.5e-05	23.1	0.1	1.1	1	0	0	1	1	1	1	GNAT	acetyltransferase
FR47	PF08445.10	gi|429217152|ref|YP_007175142.1|	-	0.0001	22.2	0.0	0.00017	21.5	0.0	1.4	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_3	PF13302.7	gi|429217152|ref|YP_007175142.1|	-	0.00041	21.0	0.0	0.00052	20.7	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.7	gi|429217152|ref|YP_007175142.1|	-	0.0054	17.1	0.1	0.018	15.5	0.0	1.9	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
GhoS	PF11080.8	gi|429217152|ref|YP_007175142.1|	-	0.12	12.3	0.0	0.21	11.6	0.0	1.4	1	0	0	1	1	1	0	Endoribonuclease	GhoS
Fer4_13	PF13370.6	gi|429217153|ref|YP_007175143.1|	-	1.9e-16	60.3	0.3	2.7e-16	59.9	0.3	1.2	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_15	PF13459.6	gi|429217153|ref|YP_007175143.1|	-	5.4e-13	49.5	0.4	6.5e-13	49.2	0.4	1.1	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
MFS_1	PF07690.16	gi|429217155|ref|YP_007175145.1|	-	1.9e-21	76.4	46.1	1.8e-12	46.9	25.2	2.1	2	0	0	2	2	2	2	Major	Facilitator	Superfamily
MFS_1_like	PF12832.7	gi|429217155|ref|YP_007175145.1|	-	2.1e-09	36.7	31.8	6.2e-09	35.2	31.8	1.7	1	1	0	1	1	1	1	MFS_1	like	family
MFS_3	PF05977.13	gi|429217155|ref|YP_007175145.1|	-	0.005	15.3	1.0	0.005	15.3	1.0	2.2	2	0	0	2	2	2	2	Transmembrane	secretion	effector
tRNA_anti-codon	PF01336.25	gi|429217156|ref|YP_007175146.1|	-	0.00047	20.1	0.1	0.0007	19.5	0.1	1.3	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
CDC24_OB3	PF17244.2	gi|429217156|ref|YP_007175146.1|	-	0.12	12.1	0.3	0.13	11.9	0.3	1.1	1	0	0	1	1	1	0	Cell	division	control	protein	24,	OB	domain	3
MFS_1	PF07690.16	gi|429217157|ref|YP_007175147.1|	-	7.4e-20	71.2	50.4	1.7e-12	47.0	24.4	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_1_like	PF12832.7	gi|429217157|ref|YP_007175147.1|	-	2.4e-06	26.7	35.3	2e-05	23.7	35.3	2.1	1	1	0	1	1	1	1	MFS_1	like	family
MFS_3	PF05977.13	gi|429217157|ref|YP_007175147.1|	-	0.00029	19.4	2.6	0.0076	14.7	0.2	2.3	2	0	0	2	2	2	2	Transmembrane	secretion	effector
PDR_CDR	PF06422.12	gi|429217157|ref|YP_007175147.1|	-	8.4	6.4	13.9	0.52	10.2	0.4	4.0	3	1	0	3	3	3	0	CDR	ABC	transporter
PmbA_TldD	PF01523.16	gi|429217158|ref|YP_007175148.1|	-	9.3e-41	140.5	1.1	1.1e-40	140.2	1.1	1.1	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
PmbA_TldD	PF01523.16	gi|429217159|ref|YP_007175149.1|	-	1.4e-35	123.5	0.1	2e-35	123.0	0.1	1.2	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
Radical_SAM	PF04055.21	gi|429217161|ref|YP_007175151.1|	-	8.5e-21	75.1	0.0	1.9e-19	70.7	0.0	2.1	1	1	1	2	2	2	1	Radical	SAM	superfamily
SPASM	PF13186.6	gi|429217161|ref|YP_007175151.1|	-	2e-08	34.6	0.4	6.5e-08	33.0	0.4	1.9	1	0	0	1	1	1	1	Iron-sulfur	cluster-binding	domain
Fer4_12	PF13353.6	gi|429217161|ref|YP_007175151.1|	-	5.6e-08	33.2	0.0	1.3e-07	32.0	0.0	1.6	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|429217161|ref|YP_007175151.1|	-	2e-05	24.7	0.2	0.00012	22.2	0.0	2.3	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
AP_endonuc_2	PF01261.24	gi|429217161|ref|YP_007175151.1|	-	0.01	15.3	0.0	0.27	10.7	0.0	2.7	3	0	0	3	3	3	0	Xylose	isomerase-like	TIM	barrel
Fusion_gly	PF00523.18	gi|429217161|ref|YP_007175151.1|	-	0.013	13.8	1.3	0.018	13.3	1.3	1.3	1	0	0	1	1	1	0	Fusion	glycoprotein	F0
DUF4434	PF14488.6	gi|429217161|ref|YP_007175151.1|	-	0.12	12.4	0.1	1.8	8.5	0.0	2.6	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4434)
GCV_H	PF01597.19	gi|429217162|ref|YP_007175152.1|	-	8.6e-39	132.2	0.5	1.1e-38	131.9	0.5	1.1	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
Biotin_lipoyl	PF00364.22	gi|429217162|ref|YP_007175152.1|	-	0.00035	20.3	1.0	0.0011	18.8	0.1	2.1	2	1	0	2	2	2	1	Biotin-requiring	enzyme
RnfC_N	PF13375.6	gi|429217162|ref|YP_007175152.1|	-	0.068	13.1	0.0	0.11	12.5	0.0	1.3	1	0	0	1	1	1	0	RnfC	Barrel	sandwich	hybrid	domain
FAD_binding_2	PF00890.24	gi|429217163|ref|YP_007175153.1|	-	1.1e-101	341.0	0.0	1.3e-101	340.7	0.0	1.1	1	0	0	1	1	1	1	FAD	binding	domain
Succ_DH_flav_C	PF02910.20	gi|429217163|ref|YP_007175153.1|	-	4.1e-41	139.9	0.1	6.2e-41	139.4	0.1	1.3	1	0	0	1	1	1	1	Fumarate	reductase	flavoprotein	C-term
Thi4	PF01946.17	gi|429217163|ref|YP_007175153.1|	-	0.0047	16.2	0.1	0.094	11.9	0.1	2.2	2	0	0	2	2	2	1	Thi4	family
Pyr_redox_2	PF07992.14	gi|429217163|ref|YP_007175153.1|	-	0.02	14.1	0.2	0.06	12.6	0.1	1.7	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
PBECR1	PF18809.1	gi|429217163|ref|YP_007175153.1|	-	0.045	14.4	0.3	1	10.0	0.1	2.2	1	1	1	2	2	2	0	phage-Barnase-EndoU-ColicinE5/D-RelE	like	nuclease1
GIDA	PF01134.22	gi|429217163|ref|YP_007175153.1|	-	0.09	11.8	0.5	0.2	10.7	0.1	1.7	2	0	0	2	2	2	0	Glucose	inhibited	division	protein	A
Sdh_cyt	PF01127.22	gi|429217164|ref|YP_007175154.1|	-	9.4e-11	41.8	5.3	1.4e-10	41.2	5.1	1.4	1	1	0	1	1	1	1	Succinate	dehydrogenase/Fumarate	reductase	transmembrane	subunit
Sdh_cyt	PF01127.22	gi|429217165|ref|YP_007175155.1|	-	2.1e-07	31.0	6.9	3.3e-07	30.4	6.9	1.3	1	0	0	1	1	1	1	Succinate	dehydrogenase/Fumarate	reductase	transmembrane	subunit
DUF846	PF05832.12	gi|429217165|ref|YP_007175155.1|	-	0.045	13.8	6.6	0.082	12.9	6.6	1.4	1	1	0	1	1	1	0	Eukaryotic	protein	of	unknown	function	(DUF846)
HemY_N	PF07219.13	gi|429217165|ref|YP_007175155.1|	-	0.052	13.8	1.0	0.052	13.8	1.0	1.9	2	0	0	2	2	2	0	HemY	protein	N-terminus
Fer2_3	PF13085.6	gi|429217166|ref|YP_007175156.1|	-	3e-36	123.7	0.0	5.1e-36	123.0	0.0	1.4	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_10	PF13237.6	gi|429217166|ref|YP_007175156.1|	-	8e-08	32.3	2.9	8e-08	32.3	2.9	2.1	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|429217166|ref|YP_007175156.1|	-	3.2e-07	30.7	3.2	3.2e-07	30.7	3.2	2.1	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|429217166|ref|YP_007175156.1|	-	9.7e-07	29.2	6.4	1.1e-06	29.1	3.7	2.1	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer2	PF00111.27	gi|429217166|ref|YP_007175156.1|	-	5.8e-06	26.2	0.2	5.8e-06	26.2	0.2	2.1	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4	PF00037.27	gi|429217166|ref|YP_007175156.1|	-	5.6e-05	22.8	1.1	5.6e-05	22.8	1.1	3.8	4	0	0	4	4	4	1	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|429217166|ref|YP_007175156.1|	-	0.00025	21.1	13.6	0.006	16.7	7.5	3.0	2	2	2	4	4	4	2	4Fe-4S	dicluster	domain
Fer2_4	PF13510.6	gi|429217166|ref|YP_007175156.1|	-	0.00093	19.2	0.1	0.0019	18.2	0.1	1.4	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_7	PF12838.7	gi|429217166|ref|YP_007175156.1|	-	0.0014	19.1	13.2	0.0088	16.6	9.4	3.1	1	1	2	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|429217166|ref|YP_007175156.1|	-	0.0024	18.8	4.3	0.0024	18.8	4.3	2.3	2	1	0	2	2	1	1	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.6	gi|429217166|ref|YP_007175156.1|	-	0.0045	17.1	9.7	0.0069	16.5	0.3	3.0	3	0	0	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|429217166|ref|YP_007175156.1|	-	0.0061	16.7	0.6	1.7	8.9	0.0	2.6	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
YidD	PF01809.18	gi|429217166|ref|YP_007175156.1|	-	0.021	14.7	0.3	0.05	13.5	0.3	1.6	1	0	0	1	1	1	0	Putative	membrane	protein	insertion	efficiency	factor
Fer4_4	PF12800.7	gi|429217166|ref|YP_007175156.1|	-	0.053	14.1	1.2	0.053	14.1	1.2	3.2	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_20	PF14691.6	gi|429217166|ref|YP_007175156.1|	-	0.11	12.3	4.6	0.67	9.8	0.3	2.5	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_2	PF12797.7	gi|429217166|ref|YP_007175156.1|	-	3	8.1	15.0	0.45	10.7	0.8	3.4	3	0	0	3	3	3	0	4Fe-4S	binding	domain
RHH_1	PF01402.21	gi|429217167|ref|YP_007175157.1|	-	5.3e-10	38.9	0.1	7.1e-10	38.5	0.1	1.1	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
RHH_3	PF12651.7	gi|429217167|ref|YP_007175157.1|	-	9.1e-07	28.7	0.6	1.2e-06	28.4	0.6	1.2	1	0	0	1	1	1	1	Ribbon-helix-helix	domain
CopG_antitoxin	PF12441.8	gi|429217167|ref|YP_007175157.1|	-	0.0015	19.0	0.2	0.0018	18.8	0.2	1.1	1	0	0	1	1	1	1	CopG	antitoxin	of	type	II	toxin-antitoxin	system
Lar_N	PF09861.9	gi|429217167|ref|YP_007175157.1|	-	0.053	12.7	0.1	0.053	12.7	0.1	1.0	1	0	0	1	1	1	0	Lactate	racemase	N-terminal	domain
Spc7	PF08317.11	gi|429217168|ref|YP_007175158.1|	-	0.01	14.8	2.7	0.011	14.6	2.7	1.1	1	0	0	1	1	1	1	Spc7	kinetochore	protein
HJURP_C	PF12347.8	gi|429217168|ref|YP_007175158.1|	-	0.017	15.2	0.3	0.14	12.2	0.1	2.2	2	1	0	2	2	2	0	Holliday	junction	regulator	protein	family	C-terminal	repeat
Striatin	PF08232.12	gi|429217168|ref|YP_007175158.1|	-	0.026	15.1	1.0	0.033	14.8	1.0	1.3	1	0	0	1	1	1	0	Striatin	family
HSBP1	PF06825.12	gi|429217168|ref|YP_007175158.1|	-	0.15	12.0	6.0	1.2	9.1	0.1	3.0	3	0	0	3	3	3	0	Heat	shock	factor	binding	protein	1
FlaC_arch	PF05377.11	gi|429217168|ref|YP_007175158.1|	-	1.7	9.1	6.9	13	6.3	0.3	2.8	2	1	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
DUF1152	PF06626.12	gi|429217169|ref|YP_007175159.1|	-	2.6e-112	374.9	0.0	3e-112	374.6	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1152)
adh_short_C2	PF13561.6	gi|429217170|ref|YP_007175160.1|	-	3.8e-28	98.6	0.0	7.6e-28	97.6	0.0	1.4	1	1	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.25	gi|429217170|ref|YP_007175160.1|	-	2.7e-21	75.9	0.0	4.3e-21	75.3	0.0	1.3	1	1	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.10	gi|429217170|ref|YP_007175160.1|	-	0.0013	18.7	0.0	0.0019	18.1	0.0	1.3	1	0	0	1	1	1	1	KR	domain
Peptidase_M16_C	PF05193.21	gi|429217170|ref|YP_007175160.1|	-	0.0032	17.5	0.1	1.2	9.2	0.0	2.2	2	0	0	2	2	2	2	Peptidase	M16	inactive	domain
UBA_2	PF08587.11	gi|429217170|ref|YP_007175160.1|	-	0.054	13.6	0.2	0.29	11.3	0.0	2.3	2	0	0	2	2	2	0	Ubiquitin	associated	domain	(UBA)
RVT_connect	PF06815.13	gi|429217171|ref|YP_007175161.1|	-	0.0035	17.6	2.1	0.0051	17.0	2.1	1.3	1	0	0	1	1	1	1	Reverse	transcriptase	connection	domain
FAD_binding_2	PF00890.24	gi|429217172|ref|YP_007175162.1|	-	7.5e-112	374.4	0.0	9.3e-112	374.1	0.0	1.1	1	0	0	1	1	1	1	FAD	binding	domain
Succ_DH_flav_C	PF02910.20	gi|429217172|ref|YP_007175162.1|	-	6.2e-37	126.4	0.3	9.8e-37	125.8	0.3	1.3	1	0	0	1	1	1	1	Fumarate	reductase	flavoprotein	C-term
Pyr_redox_2	PF07992.14	gi|429217172|ref|YP_007175162.1|	-	5.9e-05	22.4	0.1	0.00068	19.0	0.1	2.5	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.24	gi|429217172|ref|YP_007175162.1|	-	0.00059	19.5	0.3	0.0029	17.2	0.3	1.9	1	1	0	2	2	2	1	FAD	dependent	oxidoreductase
GIDA	PF01134.22	gi|429217172|ref|YP_007175162.1|	-	0.0024	17.0	1.8	0.015	14.4	1.9	2.0	1	1	0	1	1	1	1	Glucose	inhibited	division	protein	A
FAD_oxidored	PF12831.7	gi|429217172|ref|YP_007175162.1|	-	0.0081	15.5	0.5	0.49	9.7	0.7	2.3	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
HI0933_like	PF03486.14	gi|429217172|ref|YP_007175162.1|	-	0.014	14.1	2.8	1.3	7.7	0.5	3.3	3	1	0	3	3	3	0	HI0933-like	protein
DUF378	PF04070.12	gi|429217174|ref|YP_007175164.1|	-	0.004	17.0	0.3	0.004	17.0	0.3	1.7	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF378)
Fer2_3	PF13085.6	gi|429217175|ref|YP_007175165.1|	-	5e-32	110.1	0.1	9.7e-32	109.2	0.1	1.5	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_8	PF13183.6	gi|429217175|ref|YP_007175165.1|	-	9.2e-12	45.2	1.3	2.7e-11	43.7	0.3	2.1	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|429217175|ref|YP_007175165.1|	-	2.8e-10	40.2	1.1	2.8e-10	40.2	1.1	2.0	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|429217175|ref|YP_007175165.1|	-	8.5e-08	32.7	0.4	8.5e-08	32.7	0.4	2.6	2	2	1	3	3	3	1	4Fe-4S	dicluster	domain
Fer2	PF00111.27	gi|429217175|ref|YP_007175165.1|	-	1.5e-06	28.0	1.9	1.9e-06	27.7	0.1	2.0	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_9	PF13187.6	gi|429217175|ref|YP_007175165.1|	-	1.6e-06	28.2	10.0	8.9e-05	22.6	2.5	2.7	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|429217175|ref|YP_007175165.1|	-	3.5e-06	27.5	2.4	5.2e-06	26.9	0.5	2.1	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|429217175|ref|YP_007175165.1|	-	3.7e-06	27.8	2.9	7.6e-06	26.8	0.7	2.4	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Fer4	PF00037.27	gi|429217175|ref|YP_007175165.1|	-	2.5e-05	23.9	2.1	2.5e-05	23.9	2.1	3.1	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|429217175|ref|YP_007175165.1|	-	0.0017	18.5	5.9	0.024	14.7	0.4	2.6	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|429217175|ref|YP_007175165.1|	-	0.0017	18.7	0.3	0.0017	18.7	0.3	2.8	3	0	0	3	3	2	1	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|429217175|ref|YP_007175165.1|	-	0.0019	18.2	1.2	0.0019	18.2	1.2	2.9	3	0	0	3	3	2	1	4Fe-4S	binding	domain
Fer4_3	PF12798.7	gi|429217175|ref|YP_007175165.1|	-	0.0054	17.6	9.6	0.011	16.7	2.8	3.1	3	1	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|429217175|ref|YP_007175165.1|	-	0.013	15.5	1.6	0.013	15.5	1.6	3.4	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|429217175|ref|YP_007175165.1|	-	0.017	15.3	10.5	0.72	10.1	1.9	3.1	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_20	PF14691.6	gi|429217175|ref|YP_007175165.1|	-	0.031	14.0	0.4	0.92	9.3	0.1	2.6	2	0	0	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_15	PF13459.6	gi|429217175|ref|YP_007175165.1|	-	7.1	7.5	7.4	12	6.8	1.0	2.8	3	0	0	3	3	2	0	4Fe-4S	single	cluster	domain
ABC_tran	PF00005.27	gi|429217176|ref|YP_007175166.1|	-	4.4e-32	111.5	0.0	9.2e-32	110.4	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|429217176|ref|YP_007175166.1|	-	2.2e-12	47.4	1.1	7.5e-06	26.0	0.1	2.3	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_29	PF13555.6	gi|429217176|ref|YP_007175166.1|	-	8.5e-05	22.2	0.1	0.00015	21.4	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.6	gi|429217176|ref|YP_007175166.1|	-	0.00033	21.0	0.0	0.00081	19.7	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.19	gi|429217176|ref|YP_007175166.1|	-	0.00036	20.0	0.2	0.0013	18.2	0.2	1.9	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_16	PF13191.6	gi|429217176|ref|YP_007175166.1|	-	0.0016	18.8	0.0	0.0027	18.1	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_15	PF13175.6	gi|429217176|ref|YP_007175166.1|	-	0.0033	17.2	4.7	0.011	15.4	4.7	2.0	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_27	PF13514.6	gi|429217176|ref|YP_007175166.1|	-	0.0043	16.7	0.0	0.0074	15.9	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
RsgA_GTPase	PF03193.16	gi|429217176|ref|YP_007175166.1|	-	0.0044	16.9	0.7	0.017	15.0	0.2	2.0	2	0	0	2	2	2	1	RsgA	GTPase
AAA_24	PF13479.6	gi|429217176|ref|YP_007175166.1|	-	0.0053	16.5	0.1	0.22	11.2	0.0	2.2	1	1	1	2	2	2	1	AAA	domain
AAA_23	PF13476.6	gi|429217176|ref|YP_007175166.1|	-	0.016	15.8	0.1	0.016	15.8	0.1	2.4	2	1	0	2	2	2	0	AAA	domain
SRP54	PF00448.22	gi|429217176|ref|YP_007175166.1|	-	0.024	14.3	0.0	0.034	13.8	0.0	1.3	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA_30	PF13604.6	gi|429217176|ref|YP_007175166.1|	-	0.029	14.1	0.0	0.057	13.1	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
AAA_33	PF13671.6	gi|429217176|ref|YP_007175166.1|	-	0.037	14.2	0.0	0.12	12.5	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
Rad17	PF03215.15	gi|429217176|ref|YP_007175166.1|	-	0.064	13.2	0.0	0.11	12.4	0.0	1.4	1	0	0	1	1	1	0	Rad17	P-loop	domain
CbiA	PF01656.23	gi|429217176|ref|YP_007175166.1|	-	0.068	13.2	0.0	0.097	12.7	0.0	1.5	1	1	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_7	PF12775.7	gi|429217176|ref|YP_007175166.1|	-	0.093	12.2	0.0	0.2	11.1	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
MMR_HSR1	PF01926.23	gi|429217176|ref|YP_007175166.1|	-	0.094	12.8	0.2	0.25	11.4	0.2	2.0	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
MeaB	PF03308.16	gi|429217176|ref|YP_007175166.1|	-	0.12	11.4	0.0	0.18	10.7	0.0	1.2	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
IstB_IS21	PF01695.17	gi|429217176|ref|YP_007175166.1|	-	0.14	11.9	0.0	1.4	8.6	0.0	2.2	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA_25	PF13481.6	gi|429217176|ref|YP_007175166.1|	-	0.14	11.7	0.1	0.68	9.5	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
DUF1947	PF09183.10	gi|429217176|ref|YP_007175166.1|	-	0.16	12.3	1.5	1.6	9.1	0.5	2.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1947)
Alba	PF01918.21	gi|429217179|ref|YP_007175169.1|	-	1.5e-12	47.2	0.0	2e-12	46.7	0.0	1.2	1	0	0	1	1	1	1	Alba
SRP54	PF00448.22	gi|429217180|ref|YP_007175170.1|	-	8.5e-70	234.4	0.1	1.3e-69	233.8	0.1	1.3	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SRP_SPB	PF02978.19	gi|429217180|ref|YP_007175170.1|	-	6.7e-26	90.8	0.5	4e-25	88.3	0.3	2.4	2	0	0	2	2	2	1	Signal	peptide	binding	domain
SRP54_N	PF02881.19	gi|429217180|ref|YP_007175170.1|	-	1.4e-17	63.6	0.6	6.7e-17	61.5	0.6	2.2	1	0	0	1	1	1	1	SRP54-type	protein,	helical	bundle	domain
CbiA	PF01656.23	gi|429217180|ref|YP_007175170.1|	-	0.00015	21.8	0.0	0.00063	19.8	0.0	2.4	2	1	0	2	2	2	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
cobW	PF02492.19	gi|429217180|ref|YP_007175170.1|	-	0.00045	19.9	0.2	0.0012	18.5	0.2	1.7	1	1	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_18	PF13238.6	gi|429217180|ref|YP_007175170.1|	-	0.00057	20.4	0.1	0.0021	18.6	0.1	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_30	PF13604.6	gi|429217180|ref|YP_007175170.1|	-	0.00073	19.3	0.4	0.0028	17.4	0.1	2.1	2	2	0	2	2	2	1	AAA	domain
MeaB	PF03308.16	gi|429217180|ref|YP_007175170.1|	-	0.0039	16.2	0.1	0.0096	14.9	0.1	1.6	1	0	0	1	1	1	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
AAA_31	PF13614.6	gi|429217180|ref|YP_007175170.1|	-	0.0042	17.0	2.0	0.03	14.2	1.3	2.7	2	1	1	3	3	3	1	AAA	domain
ParA	PF10609.9	gi|429217180|ref|YP_007175170.1|	-	0.0047	16.4	0.0	0.0082	15.6	0.0	1.3	1	0	0	1	1	1	1	NUBPL	iron-transfer	P-loop	NTPase
Zeta_toxin	PF06414.12	gi|429217180|ref|YP_007175170.1|	-	0.0048	16.2	0.0	0.0081	15.5	0.0	1.4	1	0	0	1	1	1	1	Zeta	toxin
MobB	PF03205.14	gi|429217180|ref|YP_007175170.1|	-	0.0063	16.4	1.6	0.009	15.9	0.2	2.0	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_16	PF13191.6	gi|429217180|ref|YP_007175170.1|	-	0.0069	16.8	0.0	0.036	14.4	0.0	2.2	2	1	0	2	2	2	1	AAA	ATPase	domain
APS_kinase	PF01583.20	gi|429217180|ref|YP_007175170.1|	-	0.0091	15.9	0.0	0.017	15.0	0.0	1.4	1	0	0	1	1	1	1	Adenylylsulphate	kinase
AAA_33	PF13671.6	gi|429217180|ref|YP_007175170.1|	-	0.012	15.8	0.0	0.023	14.9	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_22	PF13401.6	gi|429217180|ref|YP_007175170.1|	-	0.014	15.7	0.2	0.065	13.5	0.1	2.3	2	1	0	2	2	1	0	AAA	domain
AAA	PF00004.29	gi|429217180|ref|YP_007175170.1|	-	0.015	15.8	0.1	0.076	13.4	0.1	2.4	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_5	PF07728.14	gi|429217180|ref|YP_007175170.1|	-	0.033	14.2	0.0	0.085	12.9	0.0	1.8	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
NTPase_1	PF03266.15	gi|429217180|ref|YP_007175170.1|	-	0.034	14.1	2.3	0.68	9.8	2.3	2.4	1	1	0	1	1	1	0	NTPase
MipZ	PF09140.11	gi|429217180|ref|YP_007175170.1|	-	0.047	13.0	0.4	2.6	7.3	0.4	2.3	1	1	0	1	1	1	0	ATPase	MipZ
ATP_bind_1	PF03029.17	gi|429217180|ref|YP_007175170.1|	-	0.055	13.2	0.2	0.13	12.0	0.2	1.6	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
ATPase	PF06745.13	gi|429217180|ref|YP_007175170.1|	-	0.065	12.6	2.7	0.39	10.0	0.9	2.8	2	1	0	2	2	2	0	KaiC
KTI12	PF08433.10	gi|429217180|ref|YP_007175170.1|	-	0.077	12.4	0.0	0.18	11.2	0.0	1.7	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
GTP_EFTU	PF00009.27	gi|429217180|ref|YP_007175170.1|	-	0.08	12.5	0.0	0.25	10.9	0.0	1.8	2	0	0	2	2	2	0	Elongation	factor	Tu	GTP	binding	domain
ResIII	PF04851.15	gi|429217180|ref|YP_007175170.1|	-	0.084	12.9	5.3	1	9.4	1.1	3.2	2	1	1	3	3	3	0	Type	III	restriction	enzyme,	res	subunit
VirC1	PF07015.11	gi|429217180|ref|YP_007175170.1|	-	0.084	12.2	0.1	1	8.6	0.0	2.2	2	0	0	2	2	2	0	VirC1	protein
SRPRB	PF09439.10	gi|429217180|ref|YP_007175170.1|	-	0.094	12.1	1.4	7.1	6.0	0.0	2.5	3	0	0	3	3	2	0	Signal	recognition	particle	receptor	beta	subunit
CLP1_P	PF16575.5	gi|429217180|ref|YP_007175170.1|	-	0.11	12.3	0.2	21	4.9	0.0	2.6	2	0	0	2	2	2	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
AAA_28	PF13521.6	gi|429217180|ref|YP_007175170.1|	-	0.2	11.9	0.0	0.33	11.2	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_17	PF13207.6	gi|429217180|ref|YP_007175170.1|	-	0.66	10.4	5.1	0.24	11.8	0.4	2.6	3	1	0	3	3	3	0	AAA	domain
Peptidase_M28	PF04389.17	gi|429217181|ref|YP_007175171.1|	-	1.6e-16	60.6	0.0	2.6e-16	59.9	0.0	1.3	1	0	0	1	1	1	1	Peptidase	family	M28
DUF4910	PF16254.5	gi|429217181|ref|YP_007175171.1|	-	2.5e-06	26.5	0.0	5.5e-06	25.4	0.0	1.6	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4910)
PA	PF02225.22	gi|429217181|ref|YP_007175171.1|	-	0.00018	21.4	0.0	0.00057	19.9	0.0	1.8	2	0	0	2	2	2	1	PA	domain
GHMP_kinases_N	PF00288.26	gi|429217182|ref|YP_007175172.1|	-	1.6e-11	44.3	1.4	3.4e-11	43.2	1.4	1.6	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.13	gi|429217182|ref|YP_007175172.1|	-	8.1e-10	38.9	0.1	8.1e-10	38.9	0.1	1.7	2	0	0	2	2	2	1	GHMP	kinases	C	terminal
DUF711	PF05167.12	gi|429217183|ref|YP_007175173.1|	-	3.3e-32	111.9	0.0	5.6e-32	111.1	0.0	1.3	1	1	0	1	1	1	1	Uncharacterised	ACR	(DUF711)
Biotin_carb_C	PF02785.19	gi|429217183|ref|YP_007175173.1|	-	0.089	12.9	0.0	16	5.7	0.0	2.4	2	0	0	2	2	2	0	Biotin	carboxylase	C-terminal	domain
Arylesterase	PF01731.20	gi|429217184|ref|YP_007175174.1|	-	2.4e-16	59.7	32.9	0.28	11.4	0.1	10.5	2	2	8	10	10	10	8	Arylesterase
Lactonase	PF10282.9	gi|429217184|ref|YP_007175174.1|	-	3.1e-11	43.1	19.7	0.017	14.4	0.2	7.7	2	1	4	6	6	6	5	Lactonase,	7-bladed	beta-propeller
SGL	PF08450.12	gi|429217184|ref|YP_007175174.1|	-	6.5e-10	39.0	10.9	0.0071	16.0	1.0	5.5	1	1	4	5	5	5	4	SMP-30/Gluconolactonase/LRE-like	region
NHL	PF01436.21	gi|429217184|ref|YP_007175174.1|	-	2e-09	37.0	17.1	0.8	9.9	0.1	9.3	10	0	0	10	10	10	2	NHL	repeat
SpoIIE	PF07228.12	gi|429217184|ref|YP_007175174.1|	-	8e-05	22.6	0.0	11	5.9	0.0	5.1	2	2	3	5	5	5	1	Stage	II	sporulation	protein	E	(SpoIIE)
OCRE	PF17780.1	gi|429217184|ref|YP_007175174.1|	-	0.00026	21.0	39.6	1.9	8.6	0.0	10.2	10	0	0	10	10	10	3	OCRE	domain
Glu_cyclase_2	PF05096.12	gi|429217184|ref|YP_007175174.1|	-	0.0047	16.4	12.0	17	4.8	0.0	7.9	6	4	2	8	8	8	0	Glutamine	cyclotransferase
Stevor	PF17410.2	gi|429217184|ref|YP_007175174.1|	-	0.25	10.9	4.0	0.62	9.6	4.0	1.7	1	0	0	1	1	1	0	Subtelomeric	Variable	Open	Reading	frame
RIFIN	PF02009.16	gi|429217184|ref|YP_007175174.1|	-	0.27	11.1	2.9	0.48	10.3	2.9	1.4	1	0	0	1	1	1	0	Rifin
FBPase_glpX	PF03320.13	gi|429217184|ref|YP_007175174.1|	-	0.32	9.8	2.8	16	4.3	0.0	4.5	3	3	2	5	5	5	0	Bacterial	fructose-1,6-bisphosphatase,	glpX-encoded
FtsX	PF02687.21	gi|429217184|ref|YP_007175174.1|	-	0.5	10.9	3.9	5.7	7.5	1.1	3.1	2	0	0	2	2	2	0	FtsX-like	permease	family
SOG2	PF10428.9	gi|429217184|ref|YP_007175174.1|	-	0.6	9.2	17.0	0.93	8.6	17.0	1.2	1	0	0	1	1	1	0	RAM	signalling	pathway	protein
PilJ_C	PF18223.1	gi|429217184|ref|YP_007175174.1|	-	0.85	10.2	25.1	0.44	11.1	0.5	6.4	4	2	3	7	7	7	0	Pili	PilJ	C-terminal	domain
ATPase_2	PF01637.18	gi|429217185|ref|YP_007175175.1|	-	2.4e-26	93.1	4.7	5.1e-26	92.0	4.7	1.5	1	0	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
AAA_14	PF13173.6	gi|429217185|ref|YP_007175175.1|	-	5.3e-12	45.9	4.0	3.4e-05	23.9	0.1	2.8	2	1	1	3	3	3	2	AAA	domain
AAA_22	PF13401.6	gi|429217185|ref|YP_007175175.1|	-	2.6e-07	31.0	0.1	7e-07	29.6	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.6	gi|429217185|ref|YP_007175175.1|	-	7.5e-05	23.2	0.0	0.00051	20.5	0.0	2.1	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA	PF00004.29	gi|429217185|ref|YP_007175175.1|	-	0.0006	20.2	0.1	0.0031	17.9	0.1	2.1	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
TrmB	PF01978.19	gi|429217185|ref|YP_007175175.1|	-	0.0054	16.6	0.0	0.015	15.1	0.0	1.7	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_45	PF14947.6	gi|429217185|ref|YP_007175175.1|	-	0.0055	16.7	0.2	0.018	15.0	0.2	1.9	1	0	0	1	1	1	1	Winged	helix-turn-helix
TniB	PF05621.11	gi|429217185|ref|YP_007175175.1|	-	0.0059	16.0	0.2	9.1	5.6	0.0	3.1	3	0	0	3	3	3	1	Bacterial	TniB	protein
PadR	PF03551.14	gi|429217185|ref|YP_007175175.1|	-	0.029	14.3	0.2	0.12	12.3	0.0	2.2	2	0	0	2	2	2	0	Transcriptional	regulator	PadR-like	family
LANC_like	PF05147.13	gi|429217185|ref|YP_007175175.1|	-	0.036	12.7	0.1	0.066	11.8	0.1	1.5	1	0	0	1	1	1	0	Lanthionine	synthetase	C-like	protein
DUF815	PF05673.13	gi|429217185|ref|YP_007175175.1|	-	0.061	12.5	0.0	0.25	10.5	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF815)
PDDEXK_10	PF07788.11	gi|429217186|ref|YP_007175176.1|	-	8.9e-32	108.9	4.8	8.9e-32	108.9	4.8	2.0	2	0	0	2	2	2	1	PD-(D/E)XK	nuclease	superfamily
DUF3782	PF12644.7	gi|429217186|ref|YP_007175176.1|	-	1.3e-23	82.9	2.2	1e-22	80.1	0.3	2.7	2	1	1	3	3	2	1	Protein	of	unknown	function	(DUF3782)
ScsC_N	PF18312.1	gi|429217186|ref|YP_007175176.1|	-	0.0022	17.7	4.2	0.18	11.7	1.9	2.7	2	0	0	2	2	2	1	Copper	resistance	protein	ScsC	N-terminal	domain
DUF2730	PF10805.8	gi|429217186|ref|YP_007175176.1|	-	0.0028	17.7	1.5	0.0071	16.4	1.5	1.8	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF2730)
DUF16	PF01519.16	gi|429217186|ref|YP_007175176.1|	-	0.022	15.2	2.1	0.19	12.3	2.8	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	DUF16
Lebercilin	PF15619.6	gi|429217186|ref|YP_007175176.1|	-	0.031	14.0	0.7	0.045	13.4	0.7	1.2	1	0	0	1	1	1	0	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
DUF1664	PF07889.12	gi|429217186|ref|YP_007175176.1|	-	0.031	14.3	1.5	1.3	9.1	0.1	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1664)
DUF4143	PF13635.6	gi|429217186|ref|YP_007175176.1|	-	0.041	14.0	1.4	0.11	12.6	1.4	2.1	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4143)
ADIP	PF11559.8	gi|429217186|ref|YP_007175176.1|	-	0.052	13.6	1.1	0.1	12.7	1.1	1.4	1	0	0	1	1	1	0	Afadin-	and	alpha	-actinin-Binding
ABC_tran_CTD	PF16326.5	gi|429217186|ref|YP_007175176.1|	-	0.068	13.4	2.1	0.15	12.3	0.3	2.3	2	0	0	2	2	2	0	ABC	transporter	C-terminal	domain
NPV_P10	PF05531.12	gi|429217186|ref|YP_007175176.1|	-	0.1	13.1	0.8	0.47	11.0	0.9	2.1	1	1	0	1	1	1	0	Nucleopolyhedrovirus	P10	protein
Spc7	PF08317.11	gi|429217186|ref|YP_007175176.1|	-	0.21	10.4	4.7	0.2	10.5	3.4	1.7	2	1	0	2	2	2	0	Spc7	kinetochore	protein
Aldo_ket_red	PF00248.21	gi|429217187|ref|YP_007175177.1|	-	1.5e-66	224.6	0.4	3.2e-56	190.7	0.1	2.0	1	1	1	2	2	2	2	Aldo/keto	reductase	family
Enoyl_reductase	PF12241.8	gi|429217187|ref|YP_007175177.1|	-	0.001	18.5	0.2	0.0018	17.7	0.2	1.3	1	0	0	1	1	1	1	Trans-2-enoyl-CoA	reductase	catalytic	region
PALP	PF00291.25	gi|429217188|ref|YP_007175178.1|	-	7.2e-75	252.1	0.0	8.3e-75	251.9	0.0	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
Prok-RING_1	PF14446.6	gi|429217188|ref|YP_007175178.1|	-	0.0015	18.4	1.2	0.0028	17.5	1.2	1.4	1	0	0	1	1	1	1	Prokaryotic	RING	finger	family	1
HypA	PF01155.19	gi|429217188|ref|YP_007175178.1|	-	0.0022	18.0	0.2	0.0039	17.2	0.2	1.3	1	0	0	1	1	1	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
TF_Zn_Ribbon	PF08271.12	gi|429217188|ref|YP_007175178.1|	-	0.0024	17.4	0.5	0.0047	16.4	0.5	1.5	1	0	0	1	1	1	1	TFIIB	zinc-binding
Zn-ribbon_8	PF09723.10	gi|429217188|ref|YP_007175178.1|	-	0.0094	16.1	0.1	0.019	15.1	0.1	1.4	1	0	0	1	1	1	1	Zinc	ribbon	domain
PK_C	PF02887.16	gi|429217188|ref|YP_007175178.1|	-	0.044	14.0	0.1	0.18	12.0	0.1	2.1	1	1	0	1	1	1	0	Pyruvate	kinase,	alpha/beta	domain
RNA_POL_M_15KD	PF02150.16	gi|429217188|ref|YP_007175178.1|	-	0.055	13.4	0.2	1.1	9.1	0.0	2.3	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
zf-ACC	PF17848.1	gi|429217188|ref|YP_007175178.1|	-	0.13	12.3	4.3	1.1	9.4	4.3	2.3	1	1	0	1	1	1	0	Acetyl-coA	carboxylase	zinc	finger	domain
zf-C2HC_2	PF13913.6	gi|429217188|ref|YP_007175178.1|	-	0.55	10.2	2.3	20	5.2	0.0	2.5	2	0	0	2	2	2	0	zinc-finger	of	a	C2HC-type
PhnA_Zn_Ribbon	PF08274.12	gi|429217188|ref|YP_007175178.1|	-	0.69	9.9	2.3	1.7	8.7	2.3	1.6	1	1	0	1	1	1	0	PhnA	Zinc-Ribbon
A2L_zn_ribbon	PF08792.10	gi|429217188|ref|YP_007175178.1|	-	1.8	8.4	5.5	1.6	8.5	3.3	2.1	2	1	1	3	3	3	0	A2L	zinc	ribbon	domain
zinc_ribbon_4	PF13717.6	gi|429217188|ref|YP_007175178.1|	-	2.2	8.2	3.8	41	4.2	3.8	2.4	1	1	1	2	2	2	0	zinc-ribbon	domain
UDG	PF03167.19	gi|429217189|ref|YP_007175179.1|	-	1e-32	113.2	0.0	1.4e-32	112.8	0.0	1.1	1	0	0	1	1	1	1	Uracil	DNA	glycosylase	superfamily
DSPc	PF00782.20	gi|429217190|ref|YP_007175180.1|	-	5e-18	65.2	0.0	6.1e-18	64.9	0.0	1.1	1	0	0	1	1	1	1	Dual	specificity	phosphatase,	catalytic	domain
Y_phosphatase	PF00102.27	gi|429217190|ref|YP_007175180.1|	-	1.2e-05	25.0	0.0	1.6e-05	24.6	0.0	1.2	1	0	0	1	1	1	1	Protein-tyrosine	phosphatase
PTPlike_phytase	PF14566.6	gi|429217190|ref|YP_007175180.1|	-	0.011	15.9	0.0	0.017	15.3	0.0	1.3	1	0	0	1	1	1	0	Inositol	hexakisphosphate
CDKN3	PF05706.12	gi|429217190|ref|YP_007175180.1|	-	0.014	15.0	0.1	0.021	14.5	0.1	1.2	1	0	0	1	1	1	0	Cyclin-dependent	kinase	inhibitor	3	(CDKN3)
Y_phosphatase3	PF13350.6	gi|429217190|ref|YP_007175180.1|	-	0.067	13.2	0.0	0.088	12.8	0.0	1.2	1	0	0	1	1	1	0	Tyrosine	phosphatase	family
CitG	PF01874.16	gi|429217191|ref|YP_007175181.1|	-	5.1e-17	62.4	0.0	7.3e-17	61.9	0.0	1.1	1	0	0	1	1	1	1	ATP:dephospho-CoA	triphosphoribosyl	transferase
DUF2721	PF11026.8	gi|429217192|ref|YP_007175182.1|	-	0.0048	16.8	0.2	0.0067	16.3	0.2	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2721)
Vps36_ESCRT-II	PF11605.8	gi|429217192|ref|YP_007175182.1|	-	0.0059	16.8	0.1	0.01	16.0	0.1	1.3	1	0	0	1	1	1	1	Vacuolar	protein	sorting	protein	36	Vps36
BPL_LplA_LipB	PF03099.19	gi|429217193|ref|YP_007175183.1|	-	2.2e-11	43.8	0.0	4e-11	43.0	0.0	1.4	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
Lip_prot_lig_C	PF10437.9	gi|429217194|ref|YP_007175184.1|	-	2.3e-10	40.3	0.7	2.8e-10	40.0	0.7	1.0	1	0	0	1	1	1	1	Bacterial	lipoate	protein	ligase	C-terminus
DNA_binding_1	PF01035.20	gi|429217195|ref|YP_007175185.1|	-	2e-20	72.7	0.0	2.6e-20	72.3	0.0	1.1	1	0	0	1	1	1	1	6-O-methylguanine	DNA	methyltransferase,	DNA	binding	domain
TusA	PF01206.17	gi|429217196|ref|YP_007175186.1|	-	2.3e-07	30.5	0.0	2.5e-07	30.4	0.0	1.1	1	0	0	1	1	1	1	Sulfurtransferase	TusA
Tme5_EGF_like	PF09064.10	gi|429217196|ref|YP_007175186.1|	-	0.1	12.5	0.1	0.17	11.8	0.1	1.3	1	0	0	1	1	1	0	Thrombomodulin	like	fifth	domain,	EGF-like
Pyr_redox_2	PF07992.14	gi|429217198|ref|YP_007175188.1|	-	2.2e-25	89.5	0.0	3.1e-25	89.0	0.0	1.2	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|429217198|ref|YP_007175188.1|	-	1.8e-10	41.2	1.5	0.00024	21.6	0.4	3.4	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.6	gi|429217198|ref|YP_007175188.1|	-	7.3e-07	29.3	0.3	1.8e-06	28.1	0.3	1.6	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
DAO	PF01266.24	gi|429217198|ref|YP_007175188.1|	-	6.8e-05	22.6	0.3	0.079	12.5	0.4	2.3	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
3HCDH_N	PF02737.18	gi|429217198|ref|YP_007175188.1|	-	0.00063	19.7	0.2	0.0011	18.8	0.2	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
AlaDh_PNT_C	PF01262.21	gi|429217198|ref|YP_007175188.1|	-	0.00082	18.7	0.8	0.0037	16.6	0.3	2.0	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
Pyr_redox_3	PF13738.6	gi|429217198|ref|YP_007175188.1|	-	0.0012	18.1	1.8	2	7.6	0.0	3.3	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.24	gi|429217198|ref|YP_007175188.1|	-	0.0022	17.1	0.2	0.057	12.5	0.1	2.4	2	0	0	2	2	2	1	FAD	binding	domain
FAD_binding_3	PF01494.19	gi|429217198|ref|YP_007175188.1|	-	0.0025	17.1	0.3	0.0079	15.5	0.1	1.9	3	0	0	3	3	3	1	FAD	binding	domain
HI0933_like	PF03486.14	gi|429217198|ref|YP_007175188.1|	-	0.0026	16.5	0.3	0.0054	15.5	0.3	1.5	1	0	0	1	1	1	1	HI0933-like	protein
CoA_binding	PF02629.19	gi|429217198|ref|YP_007175188.1|	-	0.05	14.3	0.2	11	6.8	0.2	2.6	1	1	1	2	2	2	0	CoA	binding	domain
2-Hacid_dh_C	PF02826.19	gi|429217198|ref|YP_007175188.1|	-	0.064	12.6	0.2	0.14	11.5	0.2	1.5	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
GIDA	PF01134.22	gi|429217198|ref|YP_007175188.1|	-	0.068	12.2	1.6	0.5	9.4	0.5	2.4	3	0	0	3	3	3	0	Glucose	inhibited	division	protein	A
Thi4	PF01946.17	gi|429217198|ref|YP_007175188.1|	-	0.071	12.3	0.1	0.13	11.5	0.1	1.4	1	0	0	1	1	1	0	Thi4	family
Amino_oxidase	PF01593.24	gi|429217198|ref|YP_007175188.1|	-	0.2	10.9	0.1	2.8	7.1	0.0	2.2	2	0	0	2	2	2	0	Flavin	containing	amine	oxidoreductase
adh_short_C2	PF13561.6	gi|429217199|ref|YP_007175189.1|	-	1.7e-38	132.5	0.0	2.5e-38	132.0	0.0	1.2	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.25	gi|429217199|ref|YP_007175189.1|	-	4e-29	101.5	0.0	4.8e-29	101.2	0.0	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.10	gi|429217199|ref|YP_007175189.1|	-	0.034	14.1	0.0	0.068	13.1	0.0	1.5	2	0	0	2	2	2	0	KR	domain
Sod_Fe_C	PF02777.18	gi|429217200|ref|YP_007175190.1|	-	8.6e-35	119.0	0.1	1.5e-34	118.2	0.1	1.4	1	0	0	1	1	1	1	Iron/manganese	superoxide	dismutases,	C-terminal	domain
Sod_Fe_N	PF00081.22	gi|429217200|ref|YP_007175190.1|	-	1.3e-28	99.3	1.6	2.5e-28	98.4	0.9	1.8	2	0	0	2	2	2	1	Iron/manganese	superoxide	dismutases,	alpha-hairpin	domain
ABC_tran	PF00005.27	gi|429217201|ref|YP_007175191.1|	-	2.9e-28	99.1	0.0	4.7e-28	98.4	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|429217201|ref|YP_007175191.1|	-	2e-16	60.7	1.5	4.5e-09	36.5	0.0	2.2	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|429217201|ref|YP_007175191.1|	-	1.3e-08	34.6	0.2	1.9e-08	34.0	0.2	1.3	1	0	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.6	gi|429217201|ref|YP_007175191.1|	-	6e-06	26.2	5.0	0.0018	18.0	1.2	2.4	1	1	1	2	2	2	2	AAA	ATPase	domain
RsgA_GTPase	PF03193.16	gi|429217201|ref|YP_007175191.1|	-	6.6e-05	22.9	0.0	0.00015	21.7	0.0	1.6	1	0	0	1	1	1	1	RsgA	GTPase
AAA_14	PF13173.6	gi|429217201|ref|YP_007175191.1|	-	8.2e-05	22.6	0.2	0.00088	19.3	0.0	2.2	1	1	1	2	2	2	1	AAA	domain
AAA_23	PF13476.6	gi|429217201|ref|YP_007175191.1|	-	0.001	19.6	1.6	0.0018	18.8	1.7	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|429217201|ref|YP_007175191.1|	-	0.0015	18.8	0.1	0.0064	16.8	0.1	1.9	1	1	0	1	1	1	1	AAA	domain
ATPase_2	PF01637.18	gi|429217201|ref|YP_007175191.1|	-	0.0016	18.4	2.9	0.0028	17.6	0.9	2.2	1	1	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
AAA_29	PF13555.6	gi|429217201|ref|YP_007175191.1|	-	0.0025	17.5	0.0	0.0058	16.3	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA	PF00004.29	gi|429217201|ref|YP_007175191.1|	-	0.0035	17.8	2.0	0.031	14.7	2.0	2.2	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.6	gi|429217201|ref|YP_007175191.1|	-	0.0041	17.5	0.0	0.012	16.0	0.0	1.7	1	1	1	2	2	2	1	AAA	ATPase	domain
Rad17	PF03215.15	gi|429217201|ref|YP_007175191.1|	-	0.0071	16.3	0.4	0.019	14.9	0.4	2.0	1	1	0	1	1	1	1	Rad17	P-loop	domain
NACHT	PF05729.12	gi|429217201|ref|YP_007175191.1|	-	0.01	15.7	0.0	0.023	14.6	0.0	1.6	2	0	0	2	2	2	0	NACHT	domain
PhoH	PF02562.16	gi|429217201|ref|YP_007175191.1|	-	0.017	14.5	0.0	0.03	13.8	0.0	1.3	1	0	0	1	1	1	0	PhoH-like	protein
AAA_5	PF07728.14	gi|429217201|ref|YP_007175191.1|	-	0.018	15.0	0.2	0.063	13.3	0.2	2.2	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_30	PF13604.6	gi|429217201|ref|YP_007175191.1|	-	0.023	14.4	0.0	0.052	13.3	0.0	1.5	2	0	0	2	2	2	0	AAA	domain
T2SSE	PF00437.20	gi|429217201|ref|YP_007175191.1|	-	0.031	13.3	0.0	0.052	12.6	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
NB-ARC	PF00931.22	gi|429217201|ref|YP_007175191.1|	-	0.033	13.4	0.8	0.082	12.1	0.1	1.9	2	0	0	2	2	2	0	NB-ARC	domain
PIF1	PF05970.14	gi|429217201|ref|YP_007175191.1|	-	0.044	13.0	0.1	0.16	11.1	0.0	1.9	2	0	0	2	2	2	0	PIF1-like	helicase
Pept_S41_N	PF18294.1	gi|429217201|ref|YP_007175191.1|	-	0.051	13.6	3.0	0.3	11.1	0.0	2.7	2	0	0	2	2	2	0	Peptidase	S41	N-terminal	domain
Thymidylate_kin	PF02223.17	gi|429217201|ref|YP_007175191.1|	-	0.073	12.7	0.0	0.25	11.0	0.0	1.8	2	0	0	2	2	2	0	Thymidylate	kinase
TniB	PF05621.11	gi|429217201|ref|YP_007175191.1|	-	0.091	12.2	0.3	2.2	7.6	0.1	2.1	2	0	0	2	2	2	0	Bacterial	TniB	protein
AAA_24	PF13479.6	gi|429217201|ref|YP_007175191.1|	-	0.098	12.4	1.5	0.46	10.2	0.1	2.3	2	0	0	2	2	2	0	AAA	domain
SRP54	PF00448.22	gi|429217201|ref|YP_007175191.1|	-	0.12	11.9	0.3	0.22	11.1	0.3	1.3	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
NTPase_1	PF03266.15	gi|429217201|ref|YP_007175191.1|	-	0.13	12.2	0.9	0.36	10.7	0.3	1.9	2	0	0	2	2	2	0	NTPase
AAA_11	PF13086.6	gi|429217201|ref|YP_007175191.1|	-	0.15	11.8	0.0	0.21	11.3	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
AAA_18	PF13238.6	gi|429217201|ref|YP_007175191.1|	-	0.17	12.4	0.6	0.34	11.4	0.5	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_28	PF13521.6	gi|429217201|ref|YP_007175191.1|	-	0.18	12.1	0.0	0.26	11.5	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
FecCD	PF01032.18	gi|429217202|ref|YP_007175192.1|	-	1.9e-75	253.8	39.4	2.3e-75	253.5	39.4	1.0	1	0	0	1	1	1	1	FecCD	transport	family
ABC-3	PF00950.17	gi|429217202|ref|YP_007175192.1|	-	0.00031	20.3	25.2	0.00071	19.2	25.2	1.6	1	0	0	1	1	1	1	ABC	3	transport	family
Peripla_BP_2	PF01497.18	gi|429217203|ref|YP_007175193.1|	-	7.2e-28	97.8	0.1	1.6e-27	96.6	0.0	1.6	2	0	0	2	2	2	1	Periplasmic	binding	protein
HemX	PF04375.14	gi|429217203|ref|YP_007175193.1|	-	3.5e-05	23.3	0.1	4.4e-05	22.9	0.1	1.1	1	0	0	1	1	1	1	HemX,	putative	uroporphyrinogen-III	C-methyltransferase
Spc7	PF08317.11	gi|429217203|ref|YP_007175193.1|	-	0.0022	16.9	0.8	0.0029	16.5	0.8	1.1	1	0	0	1	1	1	1	Spc7	kinetochore	protein
Spore_III_AB	PF09548.10	gi|429217203|ref|YP_007175193.1|	-	0.003	17.7	0.2	0.0057	16.8	0.2	1.4	1	0	0	1	1	1	1	Stage	III	sporulation	protein	AB	(spore_III_AB)
Tim29	PF10171.9	gi|429217203|ref|YP_007175193.1|	-	0.015	14.8	0.5	0.027	14.0	0.5	1.4	1	0	0	1	1	1	0	Translocase	of	the	Inner	Mitochondrial	membrane	29
DASH_Dad3	PF08656.10	gi|429217203|ref|YP_007175193.1|	-	0.026	14.6	7.2	0.39	10.8	2.8	2.5	1	1	1	2	2	2	0	DASH	complex	subunit	Dad3
HSBP1	PF06825.12	gi|429217203|ref|YP_007175193.1|	-	0.047	13.5	2.5	10	6.1	0.0	3.1	2	1	1	3	3	3	0	Heat	shock	factor	binding	protein	1
PhoU	PF01895.19	gi|429217203|ref|YP_007175193.1|	-	0.048	14.1	0.1	0.16	12.5	0.1	1.9	1	1	1	2	2	2	0	PhoU	domain
SF-assemblin	PF06705.11	gi|429217203|ref|YP_007175193.1|	-	0.068	12.5	4.9	0.11	11.8	4.9	1.2	1	0	0	1	1	1	0	SF-assemblin/beta	giardin
LapA_dom	PF06305.11	gi|429217203|ref|YP_007175193.1|	-	0.079	12.8	0.9	0.4	10.5	0.2	2.3	2	1	0	2	2	2	0	Lipopolysaccharide	assembly	protein	A	domain
PRKCSH-like	PF12999.7	gi|429217203|ref|YP_007175193.1|	-	0.094	12.5	0.5	8	6.2	0.0	2.3	2	0	0	2	2	2	0	Glucosidase	II	beta	subunit-like
MIS13	PF08202.11	gi|429217203|ref|YP_007175193.1|	-	0.12	11.6	2.4	0.18	11.1	2.4	1.2	1	0	0	1	1	1	0	Mis12-Mtw1	protein	family
AI-2E_transport	PF01594.16	gi|429217203|ref|YP_007175193.1|	-	0.12	11.5	6.5	0.26	10.4	6.5	1.5	1	0	0	1	1	1	0	AI-2E	family	transporter
Syntaxin-6_N	PF09177.11	gi|429217203|ref|YP_007175193.1|	-	0.18	12.4	1.0	0.54	10.8	1.0	1.8	1	0	0	1	1	1	0	Syntaxin	6,	N-terminal
Plk4_PB2	PF18409.1	gi|429217203|ref|YP_007175193.1|	-	0.19	12.4	0.7	0.41	11.4	0.7	1.5	1	0	0	1	1	1	0	Polo-like	Kinase	4	Polo	Box	2
DUF5082	PF16888.5	gi|429217203|ref|YP_007175193.1|	-	0.25	11.6	9.7	0.086	13.1	5.7	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF5082)
DUF3378	PF11858.8	gi|429217203|ref|YP_007175193.1|	-	0.34	11.0	0.1	0.34	11.0	0.1	2.3	2	0	0	2	2	1	0	Domain	of	unknown	function	(DUF3378)
DUF1640	PF07798.11	gi|429217203|ref|YP_007175193.1|	-	0.4	10.7	3.5	0.65	10.0	3.5	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1640)
BLOC1_2	PF10046.9	gi|429217203|ref|YP_007175193.1|	-	0.45	10.9	8.2	2.4	8.5	7.1	2.5	2	1	0	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
YlqD	PF11068.8	gi|429217203|ref|YP_007175193.1|	-	0.69	10.3	3.0	1.1	9.6	3.0	1.3	1	0	0	1	1	1	0	YlqD	protein
NPV_P10	PF05531.12	gi|429217203|ref|YP_007175193.1|	-	0.9	10.1	6.7	13	6.4	1.5	2.8	1	1	1	2	2	2	0	Nucleopolyhedrovirus	P10	protein
Fzo_mitofusin	PF04799.13	gi|429217203|ref|YP_007175193.1|	-	1.2	8.6	3.6	1.8	8.1	0.7	2.0	1	1	1	2	2	2	0	fzo-like	conserved	region
HsbA	PF12296.8	gi|429217203|ref|YP_007175193.1|	-	1.4	9.4	6.9	0.37	11.2	1.2	2.7	2	1	1	3	3	3	0	Hydrophobic	surface	binding	protein	A
Lectin_N	PF03954.14	gi|429217203|ref|YP_007175193.1|	-	2.5	7.9	7.4	15	5.3	7.4	2.0	1	1	0	1	1	1	0	Hepatic	lectin,	N-terminal	domain
DUF1664	PF07889.12	gi|429217203|ref|YP_007175193.1|	-	3.9	7.5	7.0	7.6	6.6	0.3	2.6	2	1	2	4	4	3	0	Protein	of	unknown	function	(DUF1664)
TMF_DNA_bd	PF12329.8	gi|429217203|ref|YP_007175193.1|	-	8.6	6.4	7.3	58	3.8	7.1	2.1	1	1	0	1	1	1	0	TATA	element	modulatory	factor	1	DNA	binding
IF-2B	PF01008.17	gi|429217204|ref|YP_007175194.1|	-	3e-33	115.3	0.2	4.7e-33	114.6	0.2	1.4	1	1	0	1	1	1	1	Initiation	factor	2	subunit	family
OMPdecase	PF00215.24	gi|429217205|ref|YP_007175195.1|	-	6.5e-28	97.8	0.0	8.3e-28	97.5	0.0	1.1	1	0	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
DUF5101	PF17031.5	gi|429217205|ref|YP_007175195.1|	-	0.061	13.4	0.2	0.13	12.4	0.2	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5101)
Pribosyltran	PF00156.27	gi|429217206|ref|YP_007175196.1|	-	1e-13	51.1	0.1	1.6e-13	50.4	0.1	1.2	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
OTCace_N	PF02729.21	gi|429217207|ref|YP_007175197.1|	-	7.5e-43	146.1	0.0	1.1e-42	145.5	0.0	1.3	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
OTCace	PF00185.24	gi|429217207|ref|YP_007175197.1|	-	3.7e-25	88.8	0.0	5.4e-25	88.3	0.0	1.3	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
Coilin_N	PF15862.5	gi|429217207|ref|YP_007175197.1|	-	0.023	14.5	0.1	0.052	13.4	0.1	1.5	1	0	0	1	1	1	0	Coilin	N-terminus
PyrI	PF01948.18	gi|429217208|ref|YP_007175198.1|	-	2.4e-32	111.1	2.8	2.4e-32	111.1	2.8	1.6	2	0	0	2	2	2	1	Aspartate	carbamoyltransferase	regulatory	chain,	allosteric	domain
PyrI_C	PF02748.15	gi|429217208|ref|YP_007175198.1|	-	1.5e-17	63.2	1.2	2.6e-17	62.5	1.2	1.4	1	0	0	1	1	1	1	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
Arc_trans_TRASH	PF08394.10	gi|429217208|ref|YP_007175198.1|	-	0.019	15.3	1.0	0.047	14.0	1.0	1.7	1	0	0	1	1	1	0	Archaeal	TRASH	domain
zf-ribbon_3	PF13248.6	gi|429217208|ref|YP_007175198.1|	-	0.027	13.9	0.0	0.064	12.7	0.0	1.7	1	0	0	1	1	1	0	zinc-ribbon	domain
Amidohydro_1	PF01979.20	gi|429217209|ref|YP_007175199.1|	-	1.4e-17	64.1	0.0	1.8e-17	63.7	0.0	1.2	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.11	gi|429217209|ref|YP_007175199.1|	-	0.21	11.0	0.0	14	5.0	0.0	2.2	2	0	0	2	2	2	0	Amidohydrolase	family
CDP-OH_P_transf	PF01066.21	gi|429217210|ref|YP_007175200.1|	-	6.6e-14	52.4	2.5	6.6e-14	52.4	2.5	2.4	2	0	0	2	2	2	1	CDP-alcohol	phosphatidyltransferase
Ysc84	PF04366.12	gi|429217210|ref|YP_007175200.1|	-	0.037	13.8	0.0	0.044	13.5	0.0	1.2	1	0	0	1	1	1	0	Las17-binding	protein	actin	regulator
RDD	PF06271.12	gi|429217210|ref|YP_007175200.1|	-	0.23	11.6	10.0	2.6	8.3	6.3	2.1	1	1	1	2	2	2	0	RDD	family
DUF4408	PF14364.6	gi|429217210|ref|YP_007175200.1|	-	0.39	10.5	4.1	1	9.1	4.1	1.8	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4408)
HemY_N	PF07219.13	gi|429217210|ref|YP_007175200.1|	-	0.78	10.0	3.1	6	7.1	0.6	2.4	2	1	1	3	3	3	0	HemY	protein	N-terminus
adh_short_C2	PF13561.6	gi|429217211|ref|YP_007175201.1|	-	2e-57	194.5	0.0	2.5e-57	194.1	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.25	gi|429217211|ref|YP_007175201.1|	-	4.1e-57	192.8	0.4	4.9e-57	192.6	0.4	1.0	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.10	gi|429217211|ref|YP_007175201.1|	-	3.5e-16	59.6	0.0	7.6e-16	58.5	0.0	1.5	1	1	1	2	2	2	1	KR	domain
Epimerase	PF01370.21	gi|429217211|ref|YP_007175201.1|	-	0.00067	19.2	0.1	0.0014	18.2	0.1	1.7	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
DUF1776	PF08643.10	gi|429217211|ref|YP_007175201.1|	-	0.00071	19.0	0.0	0.0019	17.7	0.0	1.7	1	1	0	1	1	1	1	Fungal	family	of	unknown	function	(DUF1776)
F420_oxidored	PF03807.17	gi|429217211|ref|YP_007175201.1|	-	0.0054	17.3	0.5	0.016	15.7	0.2	2.0	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
YAcAr	PF10686.9	gi|429217211|ref|YP_007175201.1|	-	0.018	15.0	0.0	0.039	13.9	0.0	1.6	1	0	0	1	1	1	0	YspA,	cpYpsA-related	SLOG	family
Glyco_transf_28	PF03033.20	gi|429217211|ref|YP_007175201.1|	-	0.063	13.3	0.2	0.63	10.1	0.1	2.2	1	1	0	2	2	2	0	Glycosyltransferase	family	28	N-terminal	domain
ACT	PF01842.25	gi|429217211|ref|YP_007175201.1|	-	0.097	12.5	0.3	4.8	7.0	0.0	2.6	2	0	0	2	2	2	0	ACT	domain
3HCDH_N	PF02737.18	gi|429217211|ref|YP_007175201.1|	-	0.11	12.4	0.3	0.28	11.0	0.1	1.7	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
ADH_N	PF08240.12	gi|429217212|ref|YP_007175202.1|	-	2.5e-16	59.5	0.2	5.2e-15	55.3	0.0	2.4	2	1	0	2	2	2	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.26	gi|429217212|ref|YP_007175202.1|	-	3.7e-15	56.1	0.0	6.2e-15	55.3	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.6	gi|429217212|ref|YP_007175202.1|	-	7.6e-08	33.5	0.0	1.3e-07	32.8	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
NAD_binding_10	PF13460.6	gi|429217212|ref|YP_007175202.1|	-	0.00049	20.0	0.0	0.00076	19.4	0.0	1.3	1	0	0	1	1	1	1	NAD(P)H-binding
Epimerase	PF01370.21	gi|429217212|ref|YP_007175202.1|	-	0.078	12.4	0.0	0.11	11.9	0.0	1.2	1	0	0	1	1	1	0	NAD	dependent	epimerase/dehydratase	family
TauE	PF01925.19	gi|429217213|ref|YP_007175203.1|	-	3.9e-47	160.9	40.8	4.4e-47	160.7	40.8	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
Herpes_LAMP2	PF06126.11	gi|429217213|ref|YP_007175203.1|	-	0.21	10.2	5.9	0.32	9.6	5.9	1.2	1	0	0	1	1	1	0	Herpesvirus	Latent	membrane	protein	2
DUF1304	PF06993.12	gi|429217213|ref|YP_007175203.1|	-	1.1	9.2	11.6	0.068	13.2	2.0	3.0	2	2	0	2	2	2	0	Protein	of	unknown	function	(DUF1304)
Prominin	PF05478.11	gi|429217213|ref|YP_007175203.1|	-	1.2	7.0	4.7	0.27	9.1	1.4	1.6	2	0	0	2	2	2	0	Prominin
Inos-1-P_synth	PF01658.17	gi|429217214|ref|YP_007175204.1|	-	5.5e-22	78.1	0.0	1.1e-21	77.1	0.0	1.5	1	0	0	1	1	1	1	Myo-inositol-1-phosphate	synthase
NAD_binding_5	PF07994.12	gi|429217214|ref|YP_007175204.1|	-	2.5e-05	23.8	0.0	0.00021	20.8	0.0	1.9	2	0	0	2	2	2	1	Myo-inositol-1-phosphate	synthase
LSM	PF01423.22	gi|429217215|ref|YP_007175205.1|	-	2.5e-18	65.5	0.3	2.9e-18	65.3	0.3	1.1	1	0	0	1	1	1	1	LSM	domain
SM-ATX	PF14438.6	gi|429217215|ref|YP_007175205.1|	-	0.0019	18.3	0.1	0.0026	17.8	0.1	1.2	1	0	0	1	1	1	1	Ataxin	2	SM	domain
HydF_dimer	PF18128.1	gi|429217215|ref|YP_007175205.1|	-	0.11	12.6	0.1	0.12	12.4	0.1	1.1	1	0	0	1	1	1	0	Hydrogen	maturase	F	dimerization	domain
PhaC_N	PF07167.13	gi|429217215|ref|YP_007175205.1|	-	0.13	11.9	0.0	0.13	11.9	0.0	1.1	1	0	0	1	1	1	0	Poly-beta-hydroxybutyrate	polymerase	(PhaC)	N-terminus
DUF2208	PF09973.9	gi|429217216|ref|YP_007175206.1|	-	2.2e-75	253.2	15.9	2.5e-75	253.1	15.9	1.0	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2208)
Colicin_V	PF02674.16	gi|429217216|ref|YP_007175206.1|	-	0.24	11.4	11.6	0.22	11.5	2.3	2.2	2	0	0	2	2	2	0	Colicin	V	production	protein
Phage_holin_3_6	PF07332.11	gi|429217216|ref|YP_007175206.1|	-	0.28	11.2	0.2	0.28	11.2	0.2	2.2	2	0	0	2	2	2	0	Putative	Actinobacterial	Holin-X,	holin	superfamily	III
DHHC	PF01529.20	gi|429217216|ref|YP_007175206.1|	-	1.7	8.8	8.8	10	6.3	0.1	2.4	2	0	0	2	2	2	0	DHHC	palmitoyltransferase
Amidohydro_1	PF01979.20	gi|429217217|ref|YP_007175207.1|	-	1.7e-06	27.6	0.0	2.7e-05	23.7	0.0	2.0	1	1	1	2	2	2	2	Amidohydrolase	family
SCP2	PF02036.17	gi|429217218|ref|YP_007175208.1|	-	8.3e-16	58.3	0.0	9.4e-16	58.2	0.0	1.1	1	0	0	1	1	1	1	SCP-2	sterol	transfer	family
Alkyl_sulf_C	PF14864.6	gi|429217218|ref|YP_007175208.1|	-	0.00088	19.5	0.0	0.0011	19.3	0.0	1.1	1	0	0	1	1	1	1	Alkyl	sulfatase	C-terminal
Thiolase_N	PF00108.23	gi|429217219|ref|YP_007175209.1|	-	1.4e-27	96.8	0.3	9.5e-24	84.1	0.0	2.6	3	0	0	3	3	3	2	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.18	gi|429217219|ref|YP_007175209.1|	-	4.7e-08	32.7	0.5	1.6e-07	31.0	0.2	2.1	2	1	0	2	2	2	1	Thiolase,	C-terminal	domain
ketoacyl-synt	PF00109.26	gi|429217219|ref|YP_007175209.1|	-	2.2e-07	30.7	2.7	3.3e-07	30.1	1.2	2.1	2	1	0	2	2	2	1	Beta-ketoacyl	synthase,	N-terminal	domain
ACP_syn_III	PF08545.10	gi|429217219|ref|YP_007175209.1|	-	0.0051	16.6	0.1	0.073	12.9	0.1	2.3	2	0	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
OB_aCoA_assoc	PF01796.17	gi|429217220|ref|YP_007175210.1|	-	1.3e-14	53.9	0.0	1.9e-14	53.4	0.0	1.2	1	0	0	1	1	1	1	DUF35	OB-fold	domain,	acyl-CoA-associated
DUF35_N	PF12172.8	gi|429217220|ref|YP_007175210.1|	-	1.8e-07	30.9	0.0	2.9e-07	30.2	0.0	1.3	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
PfkB	PF00294.24	gi|429217221|ref|YP_007175211.1|	-	4.3e-52	177.3	0.0	5.2e-52	177.0	0.0	1.1	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Phos_pyr_kin	PF08543.12	gi|429217221|ref|YP_007175211.1|	-	0.00022	20.7	0.0	0.00033	20.1	0.0	1.2	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
DeoC	PF01791.9	gi|429217222|ref|YP_007175212.1|	-	2.8e-38	131.9	0.0	3.4e-38	131.6	0.0	1.1	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
Peptidase_C26	PF07722.13	gi|429217222|ref|YP_007175212.1|	-	0.0082	15.9	0.3	0.66	9.7	0.1	2.3	2	1	0	2	2	2	2	Peptidase	C26
T2SSL	PF05134.13	gi|429217222|ref|YP_007175212.1|	-	0.11	11.8	0.0	0.2	10.9	0.0	1.5	1	1	0	1	1	1	0	Type	II	secretion	system	(T2SS),	protein	L
DUF561	PF04481.12	gi|429217222|ref|YP_007175212.1|	-	0.11	11.6	0.2	0.24	10.5	0.2	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF561)
Flavoprotein	PF02441.19	gi|429217223|ref|YP_007175213.1|	-	2.8e-20	72.7	0.1	3.6e-20	72.3	0.1	1.1	1	0	0	1	1	1	1	Flavoprotein
tRNA_int_endo	PF01974.17	gi|429217225|ref|YP_007175215.1|	-	1.5e-23	82.6	0.0	2.4e-23	82.0	0.0	1.2	1	0	0	1	1	1	1	tRNA	intron	endonuclease,	catalytic	C-terminal	domain
tRNA_int_endo_N	PF02778.14	gi|429217225|ref|YP_007175215.1|	-	6.9e-14	51.3	0.0	1.5e-13	50.2	0.0	1.6	1	1	0	1	1	1	1	tRNA	intron	endonuclease,	N-terminal	domain
tRNA_int_end_N2	PF12928.7	gi|429217225|ref|YP_007175215.1|	-	0.021	15.0	0.0	0.031	14.5	0.0	1.3	1	0	0	1	1	1	0	tRNA-splicing	endonuclease	subunit	sen54	N-term
Rrp40_N	PF18311.1	gi|429217225|ref|YP_007175215.1|	-	0.067	13.1	0.0	0.12	12.3	0.0	1.5	1	0	0	1	1	1	0	Exosome	complex	exonuclease	Rrp40	N-terminal	domain
GalBD_like	PF17974.1	gi|429217225|ref|YP_007175215.1|	-	0.068	13.3	0.0	0.084	13.0	0.0	1.2	1	0	0	1	1	1	0	Galactose-binding	domain-like
HTH_ParB	PF17762.1	gi|429217225|ref|YP_007175215.1|	-	0.074	12.9	0.3	0.21	11.4	0.1	1.7	2	0	0	2	2	2	0	HTH	domain	found	in	ParB	protein
Glyphos_transf	PF04464.14	gi|429217226|ref|YP_007175216.1|	-	0.0054	15.8	0.1	0.012	14.6	0.0	1.6	2	0	0	2	2	2	1	CDP-Glycerol:Poly(glycerophosphate)	glycerophosphotransferase
DUF2151	PF10221.9	gi|429217226|ref|YP_007175216.1|	-	0.016	13.8	0.3	0.021	13.4	0.3	1.2	1	0	0	1	1	1	0	Cell	cycle	and	development	regulator
RNase_H2-Ydr279	PF09468.10	gi|429217226|ref|YP_007175216.1|	-	0.028	14.6	0.3	0.075	13.2	0.0	1.8	2	0	0	2	2	2	0	Ydr279p	protein	family	(RNase	H2	complex	component)	wHTH	domain
P5CR_dimer	PF14748.6	gi|429217227|ref|YP_007175217.1|	-	3.5e-30	104.3	0.1	5.4e-30	103.7	0.1	1.3	1	0	0	1	1	1	1	Pyrroline-5-carboxylate	reductase	dimerisation
F420_oxidored	PF03807.17	gi|429217227|ref|YP_007175217.1|	-	1.7e-16	60.6	1.5	3.9e-16	59.4	1.5	1.6	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
PDH	PF02153.17	gi|429217227|ref|YP_007175217.1|	-	2.4e-05	23.4	0.1	3.4e-05	23.0	0.1	1.2	1	0	0	1	1	1	1	Prephenate	dehydrogenase
NAD_binding_2	PF03446.15	gi|429217227|ref|YP_007175217.1|	-	0.00033	20.9	0.0	0.00063	19.9	0.0	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
2-Hacid_dh_C	PF02826.19	gi|429217227|ref|YP_007175217.1|	-	0.0012	18.3	0.0	0.0017	17.7	0.0	1.2	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
ApbA	PF02558.16	gi|429217227|ref|YP_007175217.1|	-	0.002	17.8	0.3	0.0059	16.3	0.3	1.7	1	1	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
TrkA_N	PF02254.18	gi|429217227|ref|YP_007175217.1|	-	0.0077	16.5	0.0	0.021	15.1	0.0	1.8	2	0	0	2	2	1	1	TrkA-N	domain
Shikimate_DH	PF01488.20	gi|429217227|ref|YP_007175217.1|	-	0.011	15.8	0.2	0.018	15.1	0.2	1.4	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
Sacchrp_dh_NADP	PF03435.18	gi|429217227|ref|YP_007175217.1|	-	0.032	14.5	0.0	0.062	13.6	0.0	1.5	1	0	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
Rossmann-like	PF10727.9	gi|429217227|ref|YP_007175217.1|	-	0.051	13.4	0.1	0.083	12.8	0.1	1.3	1	0	0	1	1	1	0	Rossmann-like	domain
3HCDH_N	PF02737.18	gi|429217227|ref|YP_007175217.1|	-	0.06	13.2	0.0	0.11	12.4	0.0	1.5	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_7	PF13241.6	gi|429217227|ref|YP_007175217.1|	-	0.063	13.7	0.0	0.11	13.0	0.0	1.6	1	1	0	1	1	1	0	Putative	NAD(P)-binding
ADH_zinc_N	PF00107.26	gi|429217227|ref|YP_007175217.1|	-	0.067	13.2	0.0	0.12	12.3	0.0	1.5	1	0	0	1	1	1	0	Zinc-binding	dehydrogenase
GFO_IDH_MocA	PF01408.22	gi|429217227|ref|YP_007175217.1|	-	0.071	13.9	0.0	0.25	12.2	0.0	1.8	2	0	0	2	2	2	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
NAD_Gly3P_dh_N	PF01210.23	gi|429217227|ref|YP_007175217.1|	-	0.14	12.1	1.7	3.1	7.7	1.6	2.4	1	1	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
ATP_bind_1	PF03029.17	gi|429217228|ref|YP_007175218.1|	-	1.6e-52	178.7	0.0	1.9e-52	178.5	0.0	1.0	1	0	0	1	1	1	1	Conserved	hypothetical	ATP	binding	protein
AAA_18	PF13238.6	gi|429217228|ref|YP_007175218.1|	-	0.00039	21.0	0.0	0.00071	20.1	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
CbiA	PF01656.23	gi|429217228|ref|YP_007175218.1|	-	0.00051	20.1	0.0	0.00091	19.3	0.0	1.6	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Zeta_toxin	PF06414.12	gi|429217228|ref|YP_007175218.1|	-	0.00057	19.2	0.0	0.021	14.1	0.0	2.3	2	0	0	2	2	2	1	Zeta	toxin
AAA_30	PF13604.6	gi|429217228|ref|YP_007175218.1|	-	0.00077	19.2	0.0	0.0011	18.8	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
MeaB	PF03308.16	gi|429217228|ref|YP_007175218.1|	-	0.00077	18.5	0.0	0.0011	18.0	0.0	1.2	1	0	0	1	1	1	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
RsgA_GTPase	PF03193.16	gi|429217228|ref|YP_007175218.1|	-	0.00085	19.3	0.9	0.27	11.1	0.1	3.0	3	0	0	3	3	3	1	RsgA	GTPase
AAA_16	PF13191.6	gi|429217228|ref|YP_007175218.1|	-	0.0013	19.1	0.0	0.0025	18.2	0.0	1.5	2	0	0	2	2	1	1	AAA	ATPase	domain
AAA_24	PF13479.6	gi|429217228|ref|YP_007175218.1|	-	0.003	17.3	0.0	0.0048	16.6	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
SRP54	PF00448.22	gi|429217228|ref|YP_007175218.1|	-	0.0038	16.9	0.1	0.026	14.1	0.1	2.0	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
MMR_HSR1	PF01926.23	gi|429217228|ref|YP_007175218.1|	-	0.0041	17.2	0.1	0.034	14.2	0.1	2.1	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
PduV-EutP	PF10662.9	gi|429217228|ref|YP_007175218.1|	-	0.0069	16.1	0.8	4.9	6.9	0.1	2.7	2	1	0	2	2	2	2	Ethanolamine	utilisation	-	propanediol	utilisation
ABC_tran	PF00005.27	gi|429217228|ref|YP_007175218.1|	-	0.011	16.3	0.0	0.021	15.4	0.0	1.5	1	0	0	1	1	1	0	ABC	transporter
KTI12	PF08433.10	gi|429217228|ref|YP_007175218.1|	-	0.012	15.0	0.0	0.038	13.4	0.0	1.7	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
GTP_EFTU	PF00009.27	gi|429217228|ref|YP_007175218.1|	-	0.013	15.0	0.0	2.8	7.4	0.0	2.3	2	1	0	2	2	2	0	Elongation	factor	Tu	GTP	binding	domain
CLP1_P	PF16575.5	gi|429217228|ref|YP_007175218.1|	-	0.015	15.1	0.0	4.6	7.0	0.0	2.3	2	0	0	2	2	2	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
Gtr1_RagA	PF04670.12	gi|429217228|ref|YP_007175218.1|	-	0.023	14.1	0.2	0.23	10.8	0.0	2.1	2	0	0	2	2	2	0	Gtr1/RagA	G	protein	conserved	region
NTPase_1	PF03266.15	gi|429217228|ref|YP_007175218.1|	-	0.023	14.6	0.1	5.6	6.9	0.1	2.4	2	0	0	2	2	2	0	NTPase
AAA_31	PF13614.6	gi|429217228|ref|YP_007175218.1|	-	0.032	14.1	0.4	2.6	7.9	0.0	2.6	2	1	0	2	2	2	0	AAA	domain
FeoB_N	PF02421.18	gi|429217228|ref|YP_007175218.1|	-	0.063	12.8	0.1	1.5	8.3	0.1	2.2	2	0	0	2	2	2	0	Ferrous	iron	transport	protein	B
AAA_5	PF07728.14	gi|429217228|ref|YP_007175218.1|	-	0.082	12.9	0.0	0.18	11.8	0.0	1.5	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
NOG1	PF06858.14	gi|429217228|ref|YP_007175218.1|	-	0.091	12.6	0.9	0.43	10.4	0.9	2.2	1	1	0	1	1	1	0	Nucleolar	GTP-binding	protein	1	(NOG1)
AAA_PrkA	PF08298.11	gi|429217228|ref|YP_007175218.1|	-	0.095	11.6	0.0	0.14	11.1	0.0	1.2	1	0	0	1	1	1	0	PrkA	AAA	domain
APS_kinase	PF01583.20	gi|429217228|ref|YP_007175218.1|	-	0.13	12.2	0.0	0.21	11.5	0.0	1.3	1	0	0	1	1	1	0	Adenylylsulphate	kinase
Fer4_NifH	PF00142.18	gi|429217228|ref|YP_007175218.1|	-	0.16	11.4	0.0	0.41	10.0	0.0	1.7	2	0	0	2	2	2	0	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
ParA	PF10609.9	gi|429217228|ref|YP_007175218.1|	-	0.17	11.3	0.0	0.3	10.5	0.0	1.4	1	0	0	1	1	1	0	NUBPL	iron-transfer	P-loop	NTPase
Dynamin_N	PF00350.23	gi|429217228|ref|YP_007175218.1|	-	0.18	11.9	0.4	6	6.9	0.0	2.2	2	0	0	2	2	2	0	Dynamin	family
NACHT	PF05729.12	gi|429217228|ref|YP_007175218.1|	-	0.2	11.6	0.1	0.33	10.8	0.1	1.3	1	0	0	1	1	1	0	NACHT	domain
QueH	PF02677.14	gi|429217228|ref|YP_007175218.1|	-	0.2	11.7	0.0	0.3	11.2	0.0	1.2	1	0	0	1	1	1	0	Epoxyqueuosine	reductase	QueH
AAA_28	PF13521.6	gi|429217228|ref|YP_007175218.1|	-	0.21	11.8	0.0	0.34	11.2	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
LUD_dom	PF02589.15	gi|429217229|ref|YP_007175219.1|	-	1.9e-48	164.7	0.0	2.8e-48	164.1	0.0	1.3	1	0	0	1	1	1	1	LUD	domain
Fer4_8	PF13183.6	gi|429217229|ref|YP_007175219.1|	-	3.6e-10	40.1	2.2	6e-10	39.4	2.2	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|429217229|ref|YP_007175219.1|	-	3.4e-06	27.1	9.5	6.8e-05	22.9	10.7	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|429217229|ref|YP_007175219.1|	-	4.3e-06	27.2	4.4	8.3e-06	26.3	4.4	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|429217229|ref|YP_007175219.1|	-	6.7e-06	25.7	10.3	0.002	17.9	1.2	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|429217229|ref|YP_007175219.1|	-	1.9e-05	24.5	9.4	0.0025	17.8	1.2	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|429217229|ref|YP_007175219.1|	-	2.2e-05	24.5	5.9	7.3e-05	22.9	6.1	1.7	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|429217229|ref|YP_007175219.1|	-	4e-05	23.7	4.5	0.11	12.6	0.5	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|429217229|ref|YP_007175219.1|	-	6.1e-05	23.9	2.2	0.049	14.6	0.0	2.3	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_17	PF13534.6	gi|429217229|ref|YP_007175219.1|	-	0.00013	22.4	5.4	0.00061	20.3	5.7	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|429217229|ref|YP_007175219.1|	-	0.00018	21.7	10.9	0.021	15.3	1.8	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_22	PF17179.4	gi|429217229|ref|YP_007175219.1|	-	0.0026	18.6	6.5	0.35	11.8	0.8	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|429217229|ref|YP_007175219.1|	-	0.0039	17.2	11.5	0.29	11.3	2.8	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_20	PF14691.6	gi|429217229|ref|YP_007175219.1|	-	0.016	15.0	3.8	0.86	9.4	0.2	2.4	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
MCR_beta_N	PF02783.15	gi|429217229|ref|YP_007175219.1|	-	0.041	13.5	0.5	0.37	10.4	0.1	2.3	1	1	1	2	2	2	0	Methyl-coenzyme	M	reductase	beta	subunit,	N-terminal	domain
CTK3	PF12243.8	gi|429217229|ref|YP_007175219.1|	-	0.054	13.5	0.8	0.1	12.6	0.4	1.7	2	0	0	2	2	1	0	CTD	kinase	subunit	gamma	CTK3
Mitofilin	PF09731.9	gi|429217229|ref|YP_007175219.1|	-	0.066	12.0	0.1	0.096	11.5	0.1	1.1	1	0	0	1	1	1	0	Mitochondrial	inner	membrane	protein
cobW	PF02492.19	gi|429217229|ref|YP_007175219.1|	-	0.16	11.5	1.0	0.23	11.1	0.0	1.8	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
Fer4_3	PF12798.7	gi|429217229|ref|YP_007175219.1|	-	4.6	8.4	14.5	2.8	9.1	3.8	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
CCG	PF02754.16	gi|429217230|ref|YP_007175220.1|	-	3.7e-09	36.7	0.0	1.6e-06	28.2	0.0	2.2	2	0	0	2	2	2	2	Cysteine-rich	domain
HTH_56	PF18662.1	gi|429217230|ref|YP_007175220.1|	-	0.0013	18.8	0.5	0.013	15.5	0.1	2.2	2	0	0	2	2	2	1	Cch	helix	turn	helix	domain
LUC7	PF03194.15	gi|429217231|ref|YP_007175221.1|	-	0.0018	18.0	3.1	0.0022	17.7	3.1	1.1	1	0	0	1	1	1	1	LUC7	N_terminus
Spc7	PF08317.11	gi|429217231|ref|YP_007175221.1|	-	0.011	14.6	11.1	0.017	14.0	11.1	1.3	1	0	0	1	1	1	0	Spc7	kinetochore	protein
Rad9	PF04139.13	gi|429217231|ref|YP_007175221.1|	-	0.017	14.6	0.9	0.028	13.9	0.9	1.4	1	0	0	1	1	1	0	Rad9
HD_4	PF13328.6	gi|429217231|ref|YP_007175221.1|	-	0.032	14.0	1.0	3	7.6	0.2	2.3	1	1	1	2	2	2	0	HD	domain
TMPIT	PF07851.13	gi|429217231|ref|YP_007175221.1|	-	0.041	13.1	3.5	0.052	12.8	3.5	1.1	1	0	0	1	1	1	0	TMPIT-like	protein
HSBP1	PF06825.12	gi|429217231|ref|YP_007175221.1|	-	0.11	12.4	2.0	0.53	10.2	2.0	2.1	1	1	0	1	1	1	0	Heat	shock	factor	binding	protein	1
DUF1902	PF08972.11	gi|429217231|ref|YP_007175221.1|	-	0.11	12.5	0.3	0.54	10.3	0.1	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF1902)
Dak2	PF02734.17	gi|429217231|ref|YP_007175221.1|	-	0.12	12.3	0.2	0.19	11.6	0.2	1.4	1	0	0	1	1	1	0	DAK2	domain
DUF1631	PF07793.11	gi|429217231|ref|YP_007175221.1|	-	0.14	10.5	3.1	0.18	10.2	3.1	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1631)
DNA_repr_REX1B	PF14966.6	gi|429217231|ref|YP_007175221.1|	-	0.15	12.7	4.0	1.2	9.8	3.7	2.1	2	0	0	2	2	2	0	DNA	repair	REX1-B
NitrOD5	PF11537.8	gi|429217231|ref|YP_007175221.1|	-	0.87	9.8	6.8	1.1	9.4	0.1	3.1	2	1	0	2	2	2	0	Nitrosopumilus	output	domain	5
DUF4481	PF14800.6	gi|429217231|ref|YP_007175221.1|	-	1.2	8.6	3.4	1.7	8.0	3.4	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4481)
DUF2521	PF10730.9	gi|429217231|ref|YP_007175221.1|	-	6.7	6.7	7.5	12	5.9	1.4	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2521)
Rubrerythrin	PF02915.17	gi|429217233|ref|YP_007175223.1|	-	7.6e-07	29.6	2.1	3.4e-06	27.5	2.1	1.9	1	1	0	1	1	1	1	Rubrerythrin
VIT1	PF01988.19	gi|429217233|ref|YP_007175223.1|	-	2e-06	27.9	19.6	0.00045	20.1	6.1	2.3	1	1	1	2	2	2	2	VIT	family
RuvC_1	PF18516.1	gi|429217233|ref|YP_007175223.1|	-	0.081	12.1	1.0	0.16	11.2	1.0	1.4	1	0	0	1	1	1	0	RuvC	nuclease	domain
SLATT_1	PF18181.1	gi|429217233|ref|YP_007175223.1|	-	0.25	11.3	4.7	0.12	12.3	1.0	2.1	1	1	1	2	2	2	0	SMODS	and	SLOG-associating	2TM	effector	domain	1
COQ7	PF03232.13	gi|429217233|ref|YP_007175223.1|	-	0.6	9.9	4.5	0.53	10.0	0.5	2.7	2	1	0	2	2	2	0	Ubiquinone	biosynthesis	protein	COQ7
Peptidase_S9	PF00326.21	gi|429217234|ref|YP_007175224.1|	-	1.4e-49	168.4	0.1	2.2e-49	167.8	0.1	1.3	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
PD40	PF07676.12	gi|429217234|ref|YP_007175224.1|	-	1.1e-10	41.2	1.8	0.32	11.0	0.1	5.7	5	0	0	5	5	5	3	WD40-like	Beta	Propeller	Repeat
Abhydrolase_1	PF00561.20	gi|429217234|ref|YP_007175224.1|	-	1.2e-07	31.6	0.3	1.2e-06	28.4	0.4	2.1	1	1	1	2	2	2	1	alpha/beta	hydrolase	fold
DLH	PF01738.18	gi|429217234|ref|YP_007175224.1|	-	1.9e-06	27.6	0.0	3.7e-06	26.7	0.0	1.4	1	0	0	1	1	1	1	Dienelactone	hydrolase	family
DUF2920	PF11144.8	gi|429217234|ref|YP_007175224.1|	-	2.8e-05	23.5	0.0	0.015	14.5	0.1	2.4	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF2920)
DPPIV_N	PF00930.21	gi|429217234|ref|YP_007175224.1|	-	4.1e-05	22.5	4.5	0.65	8.7	0.1	4.7	2	2	1	4	4	4	2	Dipeptidyl	peptidase	IV	(DPP	IV)	N-terminal	region
Hydrolase_4	PF12146.8	gi|429217234|ref|YP_007175224.1|	-	0.00074	18.8	0.0	0.078	12.2	0.0	2.3	2	0	0	2	2	2	1	Serine	aminopeptidase,	S33
AXE1	PF05448.12	gi|429217234|ref|YP_007175224.1|	-	0.0096	14.6	0.1	0.75	8.4	0.1	3.1	2	1	0	2	2	2	1	Acetyl	xylan	esterase	(AXE1)
eIF2A	PF08662.11	gi|429217234|ref|YP_007175224.1|	-	0.12	12.3	3.5	13	5.6	0.2	3.6	3	1	1	4	4	4	0	Eukaryotic	translation	initiation	factor	eIF2A
Peptidase_M1	PF01433.20	gi|429217235|ref|YP_007175225.1|	-	1.5e-80	269.9	1.8	2.9e-80	268.9	1.8	1.5	1	0	0	1	1	1	1	Peptidase	family	M1	domain
Peptidase_M1_N	PF17900.1	gi|429217235|ref|YP_007175225.1|	-	2.6e-33	115.8	1.7	1.2e-32	113.7	0.1	2.2	2	0	0	2	2	2	1	Peptidase	M1	N-terminal	domain
ERAP1_C	PF11838.8	gi|429217235|ref|YP_007175225.1|	-	2.5e-27	96.2	1.6	4.7e-27	95.4	1.6	1.4	1	0	0	1	1	1	1	ERAP1-like	C-terminal	domain
Aminopep	PF10023.9	gi|429217235|ref|YP_007175225.1|	-	0.031	13.6	0.0	0.08	12.3	0.0	1.6	1	0	0	1	1	1	0	Putative	aminopeptidase
ATP-sulfurylase	PF01747.17	gi|429217238|ref|YP_007175228.1|	-	2.8e-80	268.8	0.0	4.6e-80	268.1	0.0	1.3	1	0	0	1	1	1	1	ATP-sulfurylase
PUA_2	PF14306.6	gi|429217238|ref|YP_007175228.1|	-	5.2e-50	169.2	0.0	1e-49	168.3	0.0	1.5	2	0	0	2	2	2	1	PUA-like	domain
Fibrinogen_BP	PF08017.11	gi|429217238|ref|YP_007175228.1|	-	0.094	11.1	0.0	0.13	10.6	0.0	1.1	1	0	0	1	1	1	0	Fibrinogen	binding	protein
APS_kinase	PF01583.20	gi|429217240|ref|YP_007175230.1|	-	1.3e-56	190.9	0.0	1.5e-56	190.7	0.0	1.0	1	0	0	1	1	1	1	Adenylylsulphate	kinase
AAA_18	PF13238.6	gi|429217240|ref|YP_007175230.1|	-	1.3e-06	28.9	0.3	2.3e-06	28.2	0.3	1.4	1	1	0	1	1	1	1	AAA	domain
KTI12	PF08433.10	gi|429217240|ref|YP_007175230.1|	-	1.6e-06	27.8	0.1	1.8e-06	27.6	0.1	1.1	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
AAA_33	PF13671.6	gi|429217240|ref|YP_007175230.1|	-	2.4e-06	27.7	0.0	3.6e-06	27.2	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
SRP54	PF00448.22	gi|429217240|ref|YP_007175230.1|	-	0.00043	20.0	0.0	0.00074	19.2	0.0	1.3	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
Thymidylate_kin	PF02223.17	gi|429217240|ref|YP_007175230.1|	-	0.0006	19.5	1.5	0.0027	17.4	0.2	2.4	2	1	1	3	3	3	1	Thymidylate	kinase
AAA_16	PF13191.6	gi|429217240|ref|YP_007175230.1|	-	0.00098	19.5	0.0	0.0025	18.2	0.0	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_17	PF13207.6	gi|429217240|ref|YP_007175230.1|	-	0.0012	19.3	0.1	0.0053	17.2	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
Guanylate_kin	PF00625.21	gi|429217240|ref|YP_007175230.1|	-	0.0013	18.4	0.1	0.0024	17.6	0.1	1.4	1	0	0	1	1	1	1	Guanylate	kinase
AAA_31	PF13614.6	gi|429217240|ref|YP_007175230.1|	-	0.0018	18.2	0.0	0.0031	17.4	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
PRK	PF00485.18	gi|429217240|ref|YP_007175230.1|	-	0.0028	17.4	0.0	0.0048	16.7	0.0	1.4	1	0	0	1	1	1	1	Phosphoribulokinase	/	Uridine	kinase	family
Zeta_toxin	PF06414.12	gi|429217240|ref|YP_007175230.1|	-	0.0029	16.9	0.0	0.0044	16.3	0.0	1.2	1	0	0	1	1	1	1	Zeta	toxin
cobW	PF02492.19	gi|429217240|ref|YP_007175230.1|	-	0.0029	17.2	0.0	0.0036	16.9	0.0	1.3	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
dNK	PF01712.19	gi|429217240|ref|YP_007175230.1|	-	0.0046	16.8	1.4	0.4	10.5	0.1	2.5	1	1	1	2	2	2	1	Deoxynucleoside	kinase
NTPase_1	PF03266.15	gi|429217240|ref|YP_007175230.1|	-	0.0057	16.6	0.1	0.0075	16.2	0.1	1.4	1	1	0	1	1	1	1	NTPase
AAA_30	PF13604.6	gi|429217240|ref|YP_007175230.1|	-	0.018	14.8	0.0	0.025	14.3	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
AAA_22	PF13401.6	gi|429217240|ref|YP_007175230.1|	-	0.021	15.1	0.1	0.029	14.6	0.1	1.6	1	1	0	1	1	1	0	AAA	domain
Cytidylate_kin2	PF13189.6	gi|429217240|ref|YP_007175230.1|	-	0.025	14.7	0.2	0.98	9.5	0.0	2.6	1	1	1	2	2	2	0	Cytidylate	kinase-like	family
ABC_tran	PF00005.27	gi|429217240|ref|YP_007175230.1|	-	0.037	14.5	0.0	0.045	14.3	0.0	1.3	1	0	0	1	1	1	0	ABC	transporter
MeaB	PF03308.16	gi|429217240|ref|YP_007175230.1|	-	0.059	12.3	0.0	0.096	11.7	0.0	1.3	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
SKI	PF01202.22	gi|429217240|ref|YP_007175230.1|	-	0.063	13.4	0.3	0.46	10.6	0.3	2.2	1	1	0	1	1	1	0	Shikimate	kinase
MobB	PF03205.14	gi|429217240|ref|YP_007175230.1|	-	0.1	12.5	0.0	0.14	12.0	0.0	1.3	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_29	PF13555.6	gi|429217240|ref|YP_007175230.1|	-	0.11	12.3	0.4	0.19	11.5	0.4	1.3	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
Torsin	PF06309.11	gi|429217240|ref|YP_007175230.1|	-	0.11	12.6	0.0	0.24	11.5	0.0	1.7	1	0	0	1	1	1	0	Torsin
RsmJ	PF04378.13	gi|429217240|ref|YP_007175230.1|	-	0.13	11.5	0.0	0.21	10.8	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	RNA	large	subunit	methyltransferase	D,	RlmJ
DUF87	PF01935.17	gi|429217241|ref|YP_007175231.1|	-	0.0065	16.6	0.8	0.0075	16.4	0.8	1.0	1	0	0	1	1	1	1	Helicase	HerA,	central	domain
DUF3289	PF11692.8	gi|429217241|ref|YP_007175231.1|	-	0.011	15.3	0.7	0.012	15.3	0.7	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3289)
PG_binding_2	PF08823.11	gi|429217241|ref|YP_007175231.1|	-	0.012	15.9	0.6	0.089	13.1	0.1	2.1	1	1	0	2	2	2	0	Putative	peptidoglycan	binding	domain
DUF3408	PF11888.8	gi|429217241|ref|YP_007175231.1|	-	0.013	15.7	1.1	0.016	15.3	0.8	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3408)
HHH_3	PF12836.7	gi|429217241|ref|YP_007175231.1|	-	0.018	15.3	0.0	0.032	14.5	0.0	1.4	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
DUF2653	PF10850.8	gi|429217241|ref|YP_007175231.1|	-	0.028	14.6	0.2	0.038	14.2	0.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2653)
DNApol_Exo	PF18136.1	gi|429217241|ref|YP_007175231.1|	-	0.037	13.2	0.6	0.042	13.0	0.6	1.0	1	0	0	1	1	1	0	DNA	mitochondrial	polymerase	exonuclease	domain
PG_binding_4	PF12229.8	gi|429217241|ref|YP_007175231.1|	-	0.056	13.7	0.6	0.066	13.5	0.6	1.1	1	0	0	1	1	1	0	Putative	peptidoglycan	binding	domain
POTRA	PF07244.15	gi|429217241|ref|YP_007175231.1|	-	0.12	13.0	2.5	5	7.8	0.1	2.1	1	1	1	2	2	2	0	Surface	antigen	variable	number	repeat
QueC	PF06508.13	gi|429217242|ref|YP_007175232.1|	-	8.7e-41	139.7	0.3	1.2e-40	139.3	0.3	1.2	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
ThiI	PF02568.14	gi|429217242|ref|YP_007175232.1|	-	5.8e-07	29.3	0.0	8.4e-07	28.8	0.0	1.2	1	0	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
Tn916-Xis	PF09035.10	gi|429217244|ref|YP_007175234.1|	-	0.0021	18.2	2.2	1.7	8.9	0.1	2.6	2	2	0	2	2	2	2	Excisionase	from	transposon	Tn916
DUF3420	PF11900.8	gi|429217245|ref|YP_007175235.1|	-	0.0074	16.4	0.0	0.016	15.4	0.0	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3420)
FliG_M	PF14841.6	gi|429217245|ref|YP_007175235.1|	-	0.06	13.6	0.2	15	5.9	0.1	2.3	2	0	0	2	2	2	0	FliG	middle	domain
GFO_IDH_MocA	PF01408.22	gi|429217246|ref|YP_007175236.1|	-	3.6e-18	66.5	0.0	5.3e-18	66.0	0.0	1.3	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
GFO_IDH_MocA_C	PF02894.17	gi|429217246|ref|YP_007175236.1|	-	1.3e-06	28.4	0.0	2.4e-06	27.5	0.0	1.4	1	0	0	1	1	1	1	Oxidoreductase	family,	C-terminal	alpha/beta	domain
YflT	PF11181.8	gi|429217246|ref|YP_007175236.1|	-	0.016	15.7	0.1	0.041	14.4	0.1	1.7	1	0	0	1	1	1	0	Heat	induced	stress	protein	YflT
DUF2556	PF10831.8	gi|429217247|ref|YP_007175237.1|	-	0.47	10.4	5.9	0.35	10.8	0.3	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2556)
ABC_tran	PF00005.27	gi|429217248|ref|YP_007175238.1|	-	7.3e-30	104.3	0.0	1.2e-29	103.6	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.12	gi|429217248|ref|YP_007175238.1|	-	2.3e-17	63.3	0.1	4.2e-17	62.4	0.1	1.5	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.6	gi|429217248|ref|YP_007175238.1|	-	8.6e-06	25.8	0.8	0.097	12.5	0.0	2.2	1	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_22	PF13401.6	gi|429217248|ref|YP_007175238.1|	-	0.00014	22.2	0.1	0.00061	20.1	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.6	gi|429217248|ref|YP_007175238.1|	-	0.0026	17.4	0.1	0.005	16.6	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
SMC_N	PF02463.19	gi|429217248|ref|YP_007175238.1|	-	0.0033	16.9	0.1	0.014	14.9	0.1	1.8	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_25	PF13481.6	gi|429217248|ref|YP_007175238.1|	-	0.0047	16.5	0.0	0.81	9.2	0.1	2.7	3	0	0	3	3	3	1	AAA	domain
AAA_16	PF13191.6	gi|429217248|ref|YP_007175238.1|	-	0.021	15.2	0.0	0.036	14.4	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
RsgA_GTPase	PF03193.16	gi|429217248|ref|YP_007175238.1|	-	0.027	14.4	0.1	0.055	13.4	0.1	1.5	1	0	0	1	1	1	0	RsgA	GTPase
MobB	PF03205.14	gi|429217248|ref|YP_007175238.1|	-	0.058	13.3	0.1	0.2	11.6	0.1	1.9	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_24	PF13479.6	gi|429217248|ref|YP_007175238.1|	-	0.069	12.9	0.0	0.14	11.9	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
ATPase	PF06745.13	gi|429217248|ref|YP_007175238.1|	-	0.09	12.1	0.5	0.31	10.4	0.1	1.9	2	0	0	2	2	2	0	KaiC
cobW	PF02492.19	gi|429217248|ref|YP_007175238.1|	-	0.11	12.1	0.0	0.21	11.2	0.0	1.5	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_33	PF13671.6	gi|429217248|ref|YP_007175238.1|	-	0.12	12.5	0.0	0.18	12.0	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
NACHT	PF05729.12	gi|429217248|ref|YP_007175238.1|	-	0.15	12.0	0.8	0.23	11.4	0.3	1.6	2	0	0	2	2	1	0	NACHT	domain
TsaE	PF02367.17	gi|429217248|ref|YP_007175238.1|	-	0.15	12.1	0.2	0.3	11.1	0.2	1.4	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
G-alpha	PF00503.20	gi|429217248|ref|YP_007175238.1|	-	0.15	11.2	0.0	0.15	11.2	0.0	1.2	1	0	0	1	1	1	0	G-protein	alpha	subunit
IstB_IS21	PF01695.17	gi|429217248|ref|YP_007175238.1|	-	0.19	11.4	0.0	0.4	10.4	0.0	1.5	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
ABC_tran	PF00005.27	gi|429217249|ref|YP_007175239.1|	-	5.5e-26	91.7	0.0	7.6e-26	91.3	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.12	gi|429217249|ref|YP_007175239.1|	-	7.6e-18	64.8	0.0	1.3e-17	64.1	0.0	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.6	gi|429217249|ref|YP_007175239.1|	-	1.8e-08	34.6	3.1	5.5e-07	29.7	0.4	2.1	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|429217249|ref|YP_007175239.1|	-	7.4e-05	22.3	2.5	0.00091	18.7	2.5	2.0	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.6	gi|429217249|ref|YP_007175239.1|	-	0.0016	18.1	0.1	0.003	17.3	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
PRK	PF00485.18	gi|429217249|ref|YP_007175239.1|	-	0.0022	17.8	0.0	0.003	17.3	0.0	1.3	1	0	0	1	1	1	1	Phosphoribulokinase	/	Uridine	kinase	family
TniB	PF05621.11	gi|429217249|ref|YP_007175239.1|	-	0.0065	15.9	0.2	0.0065	15.9	0.2	1.9	2	0	0	2	2	2	1	Bacterial	TniB	protein
AAA_25	PF13481.6	gi|429217249|ref|YP_007175239.1|	-	0.01	15.4	0.0	0.025	14.2	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
AAA_23	PF13476.6	gi|429217249|ref|YP_007175239.1|	-	0.016	15.7	0.8	0.044	14.3	0.8	1.8	1	1	0	1	1	1	0	AAA	domain
DnaB_C	PF03796.15	gi|429217249|ref|YP_007175239.1|	-	0.016	14.6	0.1	0.42	9.9	0.0	2.1	2	0	0	2	2	2	0	DnaB-like	helicase	C	terminal	domain
TIP49	PF06068.13	gi|429217249|ref|YP_007175239.1|	-	0.024	13.8	0.0	0.035	13.3	0.0	1.2	1	0	0	1	1	1	0	TIP49	P-loop	domain
CbiA	PF01656.23	gi|429217249|ref|YP_007175239.1|	-	0.031	14.3	0.5	0.15	12.1	0.5	2.4	1	1	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_18	PF13238.6	gi|429217249|ref|YP_007175239.1|	-	0.039	14.5	0.1	0.18	12.3	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
NACHT	PF05729.12	gi|429217249|ref|YP_007175239.1|	-	0.061	13.2	0.1	0.11	12.5	0.1	1.3	1	0	0	1	1	1	0	NACHT	domain
NB-ARC	PF00931.22	gi|429217249|ref|YP_007175239.1|	-	0.065	12.4	0.1	0.19	10.9	0.1	1.7	2	0	0	2	2	2	0	NB-ARC	domain
AAA_16	PF13191.6	gi|429217249|ref|YP_007175239.1|	-	0.066	13.6	0.0	0.12	12.7	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_22	PF13401.6	gi|429217249|ref|YP_007175239.1|	-	0.11	12.8	2.2	2.5	8.4	2.2	2.2	1	1	0	1	1	1	0	AAA	domain
RsgA_GTPase	PF03193.16	gi|429217249|ref|YP_007175239.1|	-	0.11	12.4	0.2	0.27	11.2	0.1	1.6	2	0	0	2	2	2	0	RsgA	GTPase
DUF2004	PF09406.10	gi|429217249|ref|YP_007175239.1|	-	0.16	12.3	0.3	32	4.9	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2004)
NTPase_1	PF03266.15	gi|429217249|ref|YP_007175239.1|	-	0.16	11.9	0.5	0.39	10.6	0.1	1.8	2	0	0	2	2	2	0	NTPase
BPD_transp_1	PF00528.22	gi|429217250|ref|YP_007175240.1|	-	9e-12	45.1	22.2	9e-12	45.1	22.2	2.3	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.7	gi|429217250|ref|YP_007175240.1|	-	0.014	15.4	0.2	0.014	15.4	0.2	2.8	2	0	0	2	2	2	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
BPD_transp_1	PF00528.22	gi|429217251|ref|YP_007175241.1|	-	1.1e-32	113.2	15.6	1.1e-32	113.2	15.6	2.3	2	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
DUF5510	PF17629.2	gi|429217251|ref|YP_007175241.1|	-	0.0059	16.5	4.3	0.0059	16.5	4.3	2.8	3	0	0	3	3	3	1	Family	of	unknown	function	(DUF5510)
SBP_bac_5	PF00496.22	gi|429217252|ref|YP_007175242.1|	-	4.1e-16	58.9	7.5	8.7e-11	41.4	2.3	3.0	2	1	0	2	2	2	2	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
RIFIN	PF02009.16	gi|429217252|ref|YP_007175242.1|	-	8.7e-05	22.6	4.5	0.00016	21.7	4.5	1.4	1	0	0	1	1	1	1	Rifin
NAR2	PF16974.5	gi|429217252|ref|YP_007175242.1|	-	0.0014	18.0	0.1	0.0014	18.0	0.1	2.4	1	1	0	2	2	1	1	High-affinity	nitrate	transporter	accessory
MG2	PF01835.19	gi|429217252|ref|YP_007175242.1|	-	0.0082	16.6	1.3	0.035	14.5	1.3	2.2	1	1	0	1	1	1	1	MG2	domain
TMEM154	PF15102.6	gi|429217252|ref|YP_007175242.1|	-	0.059	13.3	20.5	0.11	12.4	20.5	1.4	1	0	0	1	1	1	0	TMEM154	protein	family
SKG6	PF08693.10	gi|429217252|ref|YP_007175242.1|	-	0.09	12.2	10.3	0.24	10.8	10.3	1.8	1	0	0	1	1	1	0	Transmembrane	alpha-helix	domain
DUF4366	PF14283.6	gi|429217252|ref|YP_007175242.1|	-	0.14	12.2	1.8	0.25	11.4	1.8	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4366)
Peptidase_M56	PF05569.11	gi|429217252|ref|YP_007175242.1|	-	0.28	10.3	3.2	0.49	9.5	3.2	1.4	1	0	0	1	1	1	0	BlaR1	peptidase	M56
Plasmodium_Vir	PF05795.11	gi|429217252|ref|YP_007175242.1|	-	0.35	10.2	2.9	0.52	9.7	2.9	1.2	1	0	0	1	1	1	0	Plasmodium	vivax	Vir	protein
DUF5305	PF17231.2	gi|429217252|ref|YP_007175242.1|	-	0.39	10.1	15.3	0.67	9.3	15.3	1.4	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5305)
MID_MedPIWI	PF18296.1	gi|429217252|ref|YP_007175242.1|	-	0.68	9.7	9.0	1.3	8.8	9.0	1.6	1	1	0	1	1	1	0	MID	domain	of	medPIWI
Sporozoite_P67	PF05642.11	gi|429217252|ref|YP_007175242.1|	-	7.3	4.5	16.2	14	3.6	16.2	1.5	1	0	0	1	1	1	0	Sporozoite	P67	surface	antigen
SBP_bac_1	PF01547.25	gi|429217253|ref|YP_007175243.1|	-	1.5e-18	67.8	13.0	2.4e-18	67.2	13.0	1.3	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_11	PF13531.6	gi|429217253|ref|YP_007175243.1|	-	0.00023	21.0	0.0	0.0098	15.7	0.0	2.3	2	0	0	2	2	2	1	Bacterial	extracellular	solute-binding	protein
Pilin_N	PF07790.11	gi|429217253|ref|YP_007175243.1|	-	0.028	15.3	0.6	0.062	14.2	0.6	1.6	1	0	0	1	1	1	0	Archaeal	Type	IV	pilin,	N-terminal
4HB_MCP_1	PF12729.7	gi|429217253|ref|YP_007175243.1|	-	0.24	10.9	3.1	0.44	10.1	3.1	1.3	1	0	0	1	1	1	0	Four	helix	bundle	sensory	module	for	signal	transduction
BPD_transp_1	PF00528.22	gi|429217254|ref|YP_007175244.1|	-	1.9e-22	79.9	51.7	1.2e-13	51.2	22.1	3.8	2	2	2	4	4	4	2	Binding-protein-dependent	transport	system	inner	membrane	component
DUF3975	PF13126.6	gi|429217254|ref|YP_007175244.1|	-	0.069	13.6	0.3	0.069	13.6	0.3	3.1	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3975)
ENOD93	PF03386.14	gi|429217254|ref|YP_007175244.1|	-	2.9	7.8	5.6	0.38	10.7	0.3	2.3	3	0	0	3	3	3	0	Early	nodulin	93	ENOD93	protein
ABC_tran	PF00005.27	gi|429217255|ref|YP_007175245.1|	-	2.8e-36	125.1	0.0	4e-36	124.5	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|429217255|ref|YP_007175245.1|	-	4e-08	33.4	0.9	0.0022	17.9	0.0	2.3	1	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|429217255|ref|YP_007175245.1|	-	0.00026	20.5	0.7	0.0032	16.9	0.7	2.0	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_22	PF13401.6	gi|429217255|ref|YP_007175245.1|	-	0.0018	18.6	0.1	0.0048	17.2	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_13	PF13166.6	gi|429217255|ref|YP_007175245.1|	-	0.0034	16.1	0.0	0.12	11.0	0.0	2.0	1	1	1	2	2	2	1	AAA	domain
AAA_16	PF13191.6	gi|429217255|ref|YP_007175245.1|	-	0.0081	16.6	0.1	0.015	15.7	0.1	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_29	PF13555.6	gi|429217255|ref|YP_007175245.1|	-	0.0088	15.8	0.1	0.022	14.5	0.1	1.7	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
cobW	PF02492.19	gi|429217255|ref|YP_007175245.1|	-	0.013	15.1	0.1	0.024	14.2	0.1	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
RsgA_GTPase	PF03193.16	gi|429217255|ref|YP_007175245.1|	-	0.018	14.9	0.1	0.037	13.9	0.1	1.5	1	0	0	1	1	1	0	RsgA	GTPase
AAA_23	PF13476.6	gi|429217255|ref|YP_007175245.1|	-	0.022	15.3	0.4	0.022	15.3	0.4	3.0	3	1	0	3	3	3	0	AAA	domain
RcpC	PF16976.5	gi|429217255|ref|YP_007175245.1|	-	0.09	12.8	0.1	0.17	11.9	0.1	1.4	1	0	0	1	1	1	0	Flp	pilus	assembly	protein	RcpC/CpaB
TFIIE_beta	PF02186.15	gi|429217255|ref|YP_007175245.1|	-	0.097	13.0	0.5	0.49	10.7	0.1	2.2	2	0	0	2	2	2	0	TFIIE	beta	subunit	core	domain
SbcCD_C	PF13558.6	gi|429217255|ref|YP_007175245.1|	-	0.16	12.2	0.0	1.7	8.9	0.0	2.1	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_30	PF13604.6	gi|429217255|ref|YP_007175245.1|	-	0.19	11.4	0.0	0.31	10.7	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
NACHT	PF05729.12	gi|429217255|ref|YP_007175245.1|	-	0.27	11.1	1.8	0.39	10.6	0.2	2.0	2	1	0	2	2	2	0	NACHT	domain
AAA_33	PF13671.6	gi|429217255|ref|YP_007175245.1|	-	0.29	11.3	0.7	0.94	9.6	0.7	2.0	1	1	0	1	1	1	0	AAA	domain
GDP_Man_Dehyd	PF16363.5	gi|429217256|ref|YP_007175246.1|	-	6.7e-54	183.5	2.4	8.6e-53	179.9	2.4	2.1	1	1	0	1	1	1	1	GDP-mannose	4,6	dehydratase
Epimerase	PF01370.21	gi|429217256|ref|YP_007175246.1|	-	7.2e-52	176.3	0.2	8.5e-52	176.0	0.2	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
3Beta_HSD	PF01073.19	gi|429217256|ref|YP_007175246.1|	-	6e-18	64.8	1.0	8.6e-18	64.3	1.0	1.2	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
Polysacc_synt_2	PF02719.15	gi|429217256|ref|YP_007175246.1|	-	3.8e-16	59.1	1.6	3.5e-15	55.9	1.6	2.2	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
RmlD_sub_bind	PF04321.17	gi|429217256|ref|YP_007175246.1|	-	5.2e-15	55.3	0.0	6.4e-15	55.0	0.0	1.2	1	1	0	1	1	1	1	RmlD	substrate	binding	domain
NAD_binding_4	PF07993.12	gi|429217256|ref|YP_007175246.1|	-	2.8e-11	43.1	0.3	1e-09	37.9	0.1	2.2	1	1	1	2	2	2	1	Male	sterility	protein
KR	PF08659.10	gi|429217256|ref|YP_007175246.1|	-	0.00019	21.4	0.1	0.0075	16.2	0.1	2.3	1	1	0	1	1	1	1	KR	domain
Tap-RNA_bind	PF09162.10	gi|429217256|ref|YP_007175246.1|	-	0.00085	19.1	1.2	0.0076	16.1	0.1	2.4	2	0	0	2	2	2	1	Tap,	RNA-binding
Tektin	PF03148.14	gi|429217257|ref|YP_007175247.1|	-	0.0051	15.6	2.5	0.006	15.4	2.5	1.0	1	0	0	1	1	1	1	Tektin	family
MHC_II_alpha	PF00993.20	gi|429217257|ref|YP_007175247.1|	-	0.13	12.0	0.0	0.17	11.6	0.0	1.2	1	0	0	1	1	1	0	Class	II	histocompatibility	antigen,	alpha	domain
DUF5320	PF17253.2	gi|429217257|ref|YP_007175247.1|	-	0.18	12.9	0.8	0.81	10.8	0.8	1.9	1	1	0	1	1	1	0	Family	of	unknown	function	(DUF5320)
Acetyltransf_1	PF00583.25	gi|429217258|ref|YP_007175248.1|	-	9.9e-14	51.6	0.0	1.6e-13	50.9	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.7	gi|429217258|ref|YP_007175248.1|	-	1.3e-07	31.6	0.0	2.3e-07	30.8	0.0	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.10	gi|429217258|ref|YP_007175248.1|	-	9.6e-06	25.5	0.0	1.8e-05	24.6	0.0	1.5	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_7	PF13508.7	gi|429217258|ref|YP_007175248.1|	-	1e-05	25.9	0.0	2e-05	25.0	0.0	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
PanZ	PF12568.8	gi|429217258|ref|YP_007175248.1|	-	0.0011	18.7	0.0	0.0015	18.3	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain,	PanZ
GNAT_acetyltran	PF12746.7	gi|429217258|ref|YP_007175248.1|	-	0.0035	16.9	0.0	0.042	13.4	0.1	2.1	2	0	0	2	2	2	1	GNAT	acetyltransferase
Acetyltransf_3	PF13302.7	gi|429217258|ref|YP_007175248.1|	-	0.0037	17.9	0.1	0.0056	17.4	0.1	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.6	gi|429217258|ref|YP_007175248.1|	-	0.0046	17.1	0.0	0.0088	16.2	0.0	1.4	1	0	0	1	1	1	1	GCN5-related	N-acetyl-transferase
Glyco_transf_7C	PF02709.14	gi|429217258|ref|YP_007175248.1|	-	0.028	14.1	0.5	0.09	12.4	0.2	2.0	2	0	0	2	2	2	0	N-terminal	domain	of	galactosyltransferase
Acetyltransf_9	PF13527.7	gi|429217258|ref|YP_007175248.1|	-	0.058	13.5	0.1	0.87	9.7	0.1	2.2	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
Glycos_transf_4	PF00953.21	gi|429217259|ref|YP_007175249.1|	-	1.6e-31	109.4	23.0	1.6e-31	109.4	23.0	2.2	3	0	0	3	3	3	1	Glycosyl	transferase	family	4
Phosphodiest	PF01663.22	gi|429217260|ref|YP_007175250.1|	-	1.1e-47	163.4	0.7	1.4e-47	163.1	0.7	1.0	1	0	0	1	1	1	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
Sulfatase	PF00884.23	gi|429217260|ref|YP_007175250.1|	-	0.08	12.3	0.4	0.23	10.8	0.5	1.9	1	1	0	1	1	1	0	Sulfatase
Baculo_PEP_C	PF04513.12	gi|429217261|ref|YP_007175251.1|	-	1.4e-08	34.9	35.5	1.8e-05	24.8	12.6	3.4	1	1	2	3	3	3	3	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
DUF1664	PF07889.12	gi|429217261|ref|YP_007175251.1|	-	6.2e-08	32.7	10.2	7.5e-06	26.0	1.7	3.6	2	1	1	3	3	3	2	Protein	of	unknown	function	(DUF1664)
NPV_P10	PF05531.12	gi|429217261|ref|YP_007175251.1|	-	1.8e-06	28.3	8.1	0.04	14.4	0.2	4.3	1	1	4	5	5	5	3	Nucleopolyhedrovirus	P10	protein
DUF4618	PF15397.6	gi|429217261|ref|YP_007175251.1|	-	1.2e-05	24.9	0.1	1.9e-05	24.2	0.1	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4618)
IFT57	PF10498.9	gi|429217261|ref|YP_007175251.1|	-	4.5e-05	22.6	3.0	0.012	14.7	0.9	2.1	1	1	1	2	2	2	2	Intra-flagellar	transport	protein	57
BLOC1_2	PF10046.9	gi|429217261|ref|YP_007175251.1|	-	0.00016	21.9	1.9	0.0067	16.7	0.2	2.9	1	1	2	3	3	3	1	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
SF-assemblin	PF06705.11	gi|429217261|ref|YP_007175251.1|	-	0.00023	20.6	2.5	0.011	15.1	0.8	2.4	1	1	2	3	3	3	2	SF-assemblin/beta	giardin
Bacillus_HBL	PF05791.11	gi|429217261|ref|YP_007175251.1|	-	0.00044	20.1	5.4	0.096	12.5	0.9	2.5	1	1	1	2	2	2	2	Bacillus	haemolytic	enterotoxin	(HBL)
Gp58	PF07902.11	gi|429217261|ref|YP_007175251.1|	-	0.00057	18.3	23.6	0.0011	17.4	23.6	1.4	1	0	0	1	1	1	1	gp58-like	protein
DUF5082	PF16888.5	gi|429217261|ref|YP_007175251.1|	-	0.00062	20.0	14.1	0.19	12.0	11.0	3.6	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF5082)
Prominin	PF05478.11	gi|429217261|ref|YP_007175251.1|	-	0.0019	16.3	12.6	0.007	14.4	12.6	1.8	1	1	0	1	1	1	1	Prominin
Apolipoprotein	PF01442.18	gi|429217261|ref|YP_007175251.1|	-	0.0026	17.7	0.0	0.0083	16.0	0.0	1.7	1	1	0	1	1	1	1	Apolipoprotein	A1/A4/E	domain
CENP-F_leu_zip	PF10473.9	gi|429217261|ref|YP_007175251.1|	-	0.0043	17.1	3.0	0.097	12.7	0.6	2.5	1	1	2	3	3	3	2	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Spc7	PF08317.11	gi|429217261|ref|YP_007175251.1|	-	0.006	15.5	0.1	0.031	13.2	0.0	1.6	1	1	0	1	1	1	1	Spc7	kinetochore	protein
Golgin_A5	PF09787.9	gi|429217261|ref|YP_007175251.1|	-	0.01	15.3	2.7	0.016	14.7	2.7	1.1	1	0	0	1	1	1	0	Golgin	subfamily	A	member	5
AIP3	PF03915.13	gi|429217261|ref|YP_007175251.1|	-	0.011	14.9	8.2	0.016	14.3	8.2	1.1	1	0	0	1	1	1	0	Actin	interacting	protein	3
Collagen_mid	PF15984.5	gi|429217261|ref|YP_007175251.1|	-	0.011	15.5	36.7	0.11	12.2	14.2	2.9	2	1	1	3	3	2	0	Bacterial	collagen,	middle	region
DUF3584	PF12128.8	gi|429217261|ref|YP_007175251.1|	-	0.013	13.1	0.0	0.019	12.5	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
DUF4600	PF15372.6	gi|429217261|ref|YP_007175251.1|	-	0.013	15.9	1.8	2.3	8.7	0.4	2.8	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4600)
Syntaxin-6_N	PF09177.11	gi|429217261|ref|YP_007175251.1|	-	0.022	15.3	16.8	1.5	9.4	4.4	3.5	1	1	2	3	3	3	0	Syntaxin	6,	N-terminal
EzrA	PF06160.12	gi|429217261|ref|YP_007175251.1|	-	0.023	12.9	0.0	0.038	12.2	0.0	1.3	1	0	0	1	1	1	0	Septation	ring	formation	regulator,	EzrA
Tweety	PF04906.13	gi|429217261|ref|YP_007175251.1|	-	0.027	13.2	7.1	0.021	13.5	1.0	2.2	1	1	1	2	2	2	0	Tweety
ATG16	PF08614.11	gi|429217261|ref|YP_007175251.1|	-	0.027	14.7	3.7	0.052	13.8	3.7	1.4	1	0	0	1	1	1	0	Autophagy	protein	16	(ATG16)
Exonuc_VII_L	PF02601.15	gi|429217261|ref|YP_007175251.1|	-	0.028	14.0	1.9	0.034	13.7	0.8	1.7	2	0	0	2	2	1	0	Exonuclease	VII,	large	subunit
COG2	PF06148.11	gi|429217261|ref|YP_007175251.1|	-	0.033	14.3	14.0	0.62	10.2	4.0	3.2	1	1	2	3	3	3	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
Fzo_mitofusin	PF04799.13	gi|429217261|ref|YP_007175251.1|	-	0.034	13.7	6.4	1.1	8.8	0.2	3.5	1	1	2	3	3	3	0	fzo-like	conserved	region
CdvA	PF18822.1	gi|429217261|ref|YP_007175251.1|	-	0.036	13.9	0.0	14	5.5	0.0	2.6	1	1	0	2	2	2	0	CdvA-like	coiled-coil	domain
DUF2884	PF11101.8	gi|429217261|ref|YP_007175251.1|	-	0.037	13.5	0.5	0.069	12.7	0.5	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2884)
ApoLp-III	PF07464.11	gi|429217261|ref|YP_007175251.1|	-	0.037	14.1	8.6	0.75	9.9	3.4	2.6	1	1	1	2	2	2	0	Apolipophorin-III	precursor	(apoLp-III)
COG5	PF10392.9	gi|429217261|ref|YP_007175251.1|	-	0.039	14.1	29.6	0.1	12.8	7.5	3.6	1	1	2	3	3	3	0	Golgi	transport	complex	subunit	5
Filament	PF00038.21	gi|429217261|ref|YP_007175251.1|	-	0.041	13.5	0.1	0.21	11.1	0.1	1.9	1	1	1	2	2	2	0	Intermediate	filament	protein
LXG	PF04740.12	gi|429217261|ref|YP_007175251.1|	-	0.043	13.5	11.6	0.13	11.9	11.6	1.8	1	1	0	1	1	1	0	LXG	domain	of	WXG	superfamily
Snapin_Pallidin	PF14712.6	gi|429217261|ref|YP_007175251.1|	-	0.043	14.2	0.9	7	7.1	0.1	3.3	1	1	3	4	4	4	0	Snapin/Pallidin
LMP	PF04778.12	gi|429217261|ref|YP_007175251.1|	-	0.044	13.7	5.2	0.91	9.4	0.2	2.6	1	1	1	2	2	2	0	LMP	repeated	region
TPR_MLP1_2	PF07926.12	gi|429217261|ref|YP_007175251.1|	-	0.054	13.6	3.0	0.37	10.9	0.5	2.7	1	1	2	3	3	3	0	TPR/MLP1/MLP2-like	protein
Dynamitin	PF04912.14	gi|429217261|ref|YP_007175251.1|	-	0.057	12.7	11.0	0.093	12.0	11.0	1.2	1	0	0	1	1	1	0	Dynamitin
FlaC_arch	PF05377.11	gi|429217261|ref|YP_007175251.1|	-	0.061	13.7	21.9	0.31	11.5	0.5	5.9	1	1	3	5	5	5	0	Flagella	accessory	protein	C	(FlaC)
HR1	PF02185.16	gi|429217261|ref|YP_007175251.1|	-	0.072	13.2	2.1	1.7	8.8	0.1	2.4	1	1	1	2	2	2	0	Hr1	repeat
Lectin_N	PF03954.14	gi|429217261|ref|YP_007175251.1|	-	0.075	12.8	31.6	0.027	14.2	5.4	3.3	1	1	2	3	3	3	0	Hepatic	lectin,	N-terminal	domain
ADIP	PF11559.8	gi|429217261|ref|YP_007175251.1|	-	0.082	13.0	2.9	3.6	7.6	0.2	3.1	1	1	1	2	2	2	0	Afadin-	and	alpha	-actinin-Binding
Phasin	PF05597.11	gi|429217261|ref|YP_007175251.1|	-	0.096	12.7	0.2	0.67	10.0	0.0	2.1	1	1	1	2	2	2	0	Poly(hydroxyalcanoate)	granule	associated	protein	(phasin)
DUF3450	PF11932.8	gi|429217261|ref|YP_007175251.1|	-	0.096	12.0	0.3	0.32	10.3	0.2	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3450)
KASH_CCD	PF14662.6	gi|429217261|ref|YP_007175251.1|	-	0.096	12.5	0.1	0.62	9.9	0.1	1.9	1	1	0	1	1	1	0	Coiled-coil	region	of	CCDC155	or	KASH
Fib_alpha	PF08702.10	gi|429217261|ref|YP_007175251.1|	-	0.1	12.8	6.5	0.76	9.9	1.7	2.4	1	1	1	2	2	2	0	Fibrinogen	alpha/beta	chain	family
ApoO	PF09769.9	gi|429217261|ref|YP_007175251.1|	-	0.1	12.6	6.7	0.68	9.9	1.2	3.1	1	1	1	2	2	2	0	Apolipoprotein	O
HMMR_N	PF15905.5	gi|429217261|ref|YP_007175251.1|	-	0.11	12.0	0.1	0.21	11.1	0.1	1.4	1	0	0	1	1	1	0	Hyaluronan	mediated	motility	receptor	N-terminal
FH2	PF02181.23	gi|429217261|ref|YP_007175251.1|	-	0.14	11.2	1.4	1.6	7.8	0.8	2.2	1	1	1	2	2	2	0	Formin	Homology	2	Domain
CLZ	PF16526.5	gi|429217261|ref|YP_007175251.1|	-	0.15	12.4	0.1	19	5.7	0.0	3.3	1	1	3	4	4	4	0	C-terminal	leucine	zipper	domain	of	cyclic	nucleotide-gated	channels
TMPIT	PF07851.13	gi|429217261|ref|YP_007175251.1|	-	0.17	11.1	2.6	0.78	8.9	0.9	2.2	1	1	1	2	2	2	0	TMPIT-like	protein
Mce4_CUP1	PF11887.8	gi|429217261|ref|YP_007175251.1|	-	0.19	11.2	5.6	0.1	12.0	1.3	2.1	1	1	1	2	2	2	0	Cholesterol	uptake	porter	CUP1	of	Mce4,	putative
DUF812	PF05667.11	gi|429217261|ref|YP_007175251.1|	-	0.19	10.6	0.1	0.3	9.9	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF812)
TMF_DNA_bd	PF12329.8	gi|429217261|ref|YP_007175251.1|	-	0.19	11.7	11.7	6.3	6.9	0.1	3.6	1	1	3	4	4	4	0	TATA	element	modulatory	factor	1	DNA	binding
Laminin_II	PF06009.12	gi|429217261|ref|YP_007175251.1|	-	0.2	11.7	16.7	0.067	13.2	3.4	2.8	1	1	2	3	3	3	0	Laminin	Domain	II
Motile_Sperm	PF00635.26	gi|429217261|ref|YP_007175251.1|	-	0.21	11.4	0.6	0.77	9.6	0.6	2.0	1	0	0	1	1	1	0	MSP	(Major	sperm	protein)	domain
DUF4795	PF16043.5	gi|429217261|ref|YP_007175251.1|	-	0.22	11.1	0.0	9.7	5.7	0.0	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4795)
Uso1_p115_C	PF04871.13	gi|429217261|ref|YP_007175251.1|	-	0.46	10.9	9.3	8	6.9	5.2	2.9	1	1	1	2	2	2	0	Uso1	/	p115	like	vesicle	tethering	protein,	C	terminal	region
RmuC	PF02646.16	gi|429217261|ref|YP_007175251.1|	-	0.46	9.6	2.4	7.4	5.6	0.3	2.8	1	1	2	3	3	3	0	RmuC	family
APG17	PF04108.12	gi|429217261|ref|YP_007175251.1|	-	0.51	9.4	14.9	1.5	7.9	15.0	1.6	1	1	0	1	1	1	0	Autophagy	protein	Apg17
SHE3	PF17078.5	gi|429217261|ref|YP_007175251.1|	-	0.55	9.9	7.4	1.3	8.6	6.9	1.7	1	1	0	1	1	1	0	SWI5-dependent	HO	expression	protein	3
Sec34	PF04136.15	gi|429217261|ref|YP_007175251.1|	-	0.68	9.8	13.4	0.05	13.5	1.9	2.6	1	1	1	2	2	2	0	Sec34-like	family
HAUS-augmin3	PF14932.6	gi|429217261|ref|YP_007175251.1|	-	0.88	9.1	3.7	9.4	5.7	2.3	2.2	1	1	1	2	2	2	0	HAUS	augmin-like	complex	subunit	3
TMF_TATA_bd	PF12325.8	gi|429217261|ref|YP_007175251.1|	-	1.1	9.6	4.3	3.3	8.0	0.2	2.4	1	1	1	2	2	2	0	TATA	element	modulatory	factor	1	TATA	binding
Vps53_N	PF04100.12	gi|429217261|ref|YP_007175251.1|	-	1.2	8.1	9.1	0.33	9.9	3.1	2.2	1	1	2	3	3	3	0	Vps53-like,	N-terminal
FPP	PF05911.11	gi|429217261|ref|YP_007175251.1|	-	1.4	7.0	14.3	2.3	6.3	14.3	1.2	1	0	0	1	1	1	0	Filament-like	plant	protein,	long	coiled-coil
MCPsignal	PF00015.21	gi|429217261|ref|YP_007175251.1|	-	1.6	8.5	19.6	3.7	7.3	7.4	2.6	1	1	1	2	2	2	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
Dynactin_p22	PF07426.11	gi|429217261|ref|YP_007175251.1|	-	2.4	8.0	7.9	5	7.0	5.6	2.2	1	1	0	1	1	1	0	Dynactin	subunit	p22
FAM76	PF16046.5	gi|429217261|ref|YP_007175251.1|	-	2.5	7.4	3.1	3.9	6.7	3.1	1.2	1	0	0	1	1	1	0	FAM76	protein
MscS_porin	PF12795.7	gi|429217261|ref|YP_007175251.1|	-	4.2	6.8	15.5	0.27	10.7	2.3	2.2	1	1	1	2	2	2	0	Mechanosensitive	ion	channel	porin	domain
DUF489	PF04356.12	gi|429217261|ref|YP_007175251.1|	-	4.8	7.1	7.8	2.8	7.9	3.7	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF489)
GCP_N_terminal	PF17681.1	gi|429217261|ref|YP_007175251.1|	-	6.6	6.3	14.8	4.1	6.9	1.9	2.4	1	1	1	2	2	2	0	Gamma	tubulin	complex	component	N-terminal
Serine_rich	PF08824.10	gi|429217261|ref|YP_007175251.1|	-	7.8	6.5	9.5	46	4.0	8.8	2.1	1	1	1	2	2	2	0	Serine	rich	protein	interaction	domain
Hydrolase_3	PF08282.12	gi|429217262|ref|YP_007175252.1|	-	6.4e-12	45.7	3.3	3.2e-07	30.4	0.1	2.1	1	1	1	2	2	2	2	haloacid	dehalogenase-like	hydrolase
Trehalose_PPase	PF02358.16	gi|429217262|ref|YP_007175252.1|	-	1.7e-06	27.3	0.1	7.9e-06	25.2	0.1	2.1	1	1	0	1	1	1	1	Trehalose-phosphatase
S6PP	PF05116.13	gi|429217262|ref|YP_007175252.1|	-	2.2e-06	27.4	0.0	4e-06	26.6	0.0	1.6	1	1	0	1	1	1	1	Sucrose-6F-phosphate	phosphohydrolase
Hydrolase	PF00702.26	gi|429217262|ref|YP_007175252.1|	-	0.0012	19.1	0.0	0.017	15.4	0.0	2.1	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.7	gi|429217262|ref|YP_007175252.1|	-	0.0068	16.8	0.1	0.33	11.3	0.0	2.8	2	1	1	3	3	3	1	haloacid	dehalogenase-like	hydrolase
SHE3	PF17078.5	gi|429217262|ref|YP_007175252.1|	-	0.021	14.5	0.5	0.044	13.5	0.5	1.5	1	0	0	1	1	1	0	SWI5-dependent	HO	expression	protein	3
TM_helix	PF05552.12	gi|429217263|ref|YP_007175253.1|	-	4.8e-07	29.7	4.3	4.8e-07	29.7	4.3	3.7	4	0	0	4	4	4	3	Conserved	TM	helix
UPF0239	PF06783.11	gi|429217263|ref|YP_007175253.1|	-	6.3	7.1	5.1	4	7.7	0.6	2.1	1	1	1	2	2	2	0	Uncharacterised	protein	family	(UPF0239)
Glycos_transf_1	PF00534.20	gi|429217264|ref|YP_007175254.1|	-	8.3e-25	87.3	0.7	1.8e-24	86.2	0.7	1.5	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|429217264|ref|YP_007175254.1|	-	1.9e-13	51.0	0.0	5.4e-13	49.5	0.0	1.7	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|429217264|ref|YP_007175254.1|	-	8.4e-05	22.6	0.0	0.0002	21.4	0.0	1.7	1	1	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_1_2	PF13524.6	gi|429217264|ref|YP_007175254.1|	-	0.0058	17.0	0.0	0.013	15.9	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
DUF3666	PF12408.8	gi|429217264|ref|YP_007175254.1|	-	0.14	11.4	0.2	1.1	8.5	0.0	2.4	2	0	0	2	2	2	0	Ribose-5-phosphate	isomerase
MMR_HSR1	PF01926.23	gi|429217265|ref|YP_007175255.1|	-	5.9e-19	68.2	0.2	2.5e-18	66.2	0.0	2.1	2	1	1	3	3	2	1	50S	ribosome-binding	GTPase
MMR_HSR1_Xtn	PF16897.5	gi|429217265|ref|YP_007175255.1|	-	2.2e-17	63.0	0.3	4.2e-15	55.7	0.0	2.8	3	0	0	3	3	3	1	C-terminal	region	of	MMR_HSR1	domain
FeoB_N	PF02421.18	gi|429217265|ref|YP_007175255.1|	-	3.3e-08	33.2	0.1	9.2e-08	31.8	0.0	1.8	2	0	0	2	2	2	1	Ferrous	iron	transport	protein	B
TGS	PF02824.21	gi|429217265|ref|YP_007175255.1|	-	2.9e-06	27.2	0.0	6.4e-06	26.1	0.0	1.6	1	0	0	1	1	1	1	TGS	domain
Dynamin_N	PF00350.23	gi|429217265|ref|YP_007175255.1|	-	0.0043	17.1	0.9	0.22	11.6	0.0	2.6	2	0	0	2	2	2	1	Dynamin	family
SRPRB	PF09439.10	gi|429217265|ref|YP_007175255.1|	-	0.0094	15.4	0.0	0.018	14.5	0.0	1.5	1	0	0	1	1	1	1	Signal	recognition	particle	receptor	beta	subunit
CEP209_CC5	PF16574.5	gi|429217265|ref|YP_007175255.1|	-	0.027	14.6	0.7	0.051	13.7	0.7	1.4	1	0	0	1	1	1	0	Coiled-coil	region	of	centrosome	protein	CE290
GTP_EFTU	PF00009.27	gi|429217265|ref|YP_007175255.1|	-	0.034	13.7	0.0	2.1	7.9	0.0	2.9	2	1	1	3	3	3	0	Elongation	factor	Tu	GTP	binding	domain
AAA_28	PF13521.6	gi|429217265|ref|YP_007175255.1|	-	0.034	14.4	0.0	0.18	12.0	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
RsgA_GTPase	PF03193.16	gi|429217265|ref|YP_007175255.1|	-	0.053	13.4	0.5	9.7	6.1	0.0	3.2	3	0	0	3	3	3	0	RsgA	GTPase
AAA_22	PF13401.6	gi|429217265|ref|YP_007175255.1|	-	0.056	13.7	0.0	0.2	12.0	0.0	1.9	1	0	0	1	1	1	0	AAA	domain
Roc	PF08477.13	gi|429217265|ref|YP_007175255.1|	-	0.057	13.6	0.0	0.15	12.3	0.0	1.9	1	1	0	1	1	1	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
Ploopntkinase3	PF18751.1	gi|429217265|ref|YP_007175255.1|	-	0.065	13.1	0.0	0.14	12.1	0.0	1.5	1	0	0	1	1	1	0	P-loop	Nucleotide	Kinase3
AAA_24	PF13479.6	gi|429217265|ref|YP_007175255.1|	-	0.076	12.7	0.0	0.14	11.9	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Gtr1_RagA	PF04670.12	gi|429217265|ref|YP_007175255.1|	-	0.15	11.4	0.0	0.29	10.5	0.0	1.4	1	0	0	1	1	1	0	Gtr1/RagA	G	protein	conserved	region
Lactamase_B	PF00753.27	gi|429217266|ref|YP_007175256.1|	-	4.4e-21	75.8	0.0	1.6e-20	74.0	0.0	1.8	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
HTH_5	PF01022.20	gi|429217266|ref|YP_007175256.1|	-	0.0005	19.9	0.5	1.6	8.6	0.0	2.8	3	0	0	3	3	3	2	Bacterial	regulatory	protein,	arsR	family
Lactamase_B_2	PF12706.7	gi|429217266|ref|YP_007175256.1|	-	0.013	15.0	0.0	0.044	13.3	0.0	1.9	1	1	0	1	1	1	0	Beta-lactamase	superfamily	domain
SIR2	PF02146.17	gi|429217267|ref|YP_007175257.1|	-	5.2e-55	186.1	0.0	6.6e-55	185.8	0.0	1.1	1	0	0	1	1	1	1	Sir2	family
Zn-ribbon_8	PF09723.10	gi|429217267|ref|YP_007175257.1|	-	0.0028	17.7	0.5	0.0056	16.8	0.5	1.4	1	0	0	1	1	1	1	Zinc	ribbon	domain
TPP_enzyme_M	PF00205.22	gi|429217267|ref|YP_007175257.1|	-	0.0089	15.8	0.0	0.075	12.8	0.0	2.1	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	central	domain
zf-RING_7	PF02591.15	gi|429217267|ref|YP_007175257.1|	-	0.011	15.9	0.1	0.96	9.7	0.0	2.5	2	0	0	2	2	2	0	C4-type	zinc	ribbon	domain
zinc_ribbon_15	PF17032.5	gi|429217267|ref|YP_007175257.1|	-	0.052	14.3	0.1	0.11	13.3	0.1	1.4	1	0	0	1	1	1	0	zinc-ribbon	family
DZR	PF12773.7	gi|429217267|ref|YP_007175257.1|	-	0.1	12.6	0.1	0.2	11.7	0.1	1.5	1	0	0	1	1	1	0	Double	zinc	ribbon
zinc_ribbon_9	PF14369.6	gi|429217267|ref|YP_007175257.1|	-	0.22	11.8	0.8	0.7	10.2	0.8	1.8	1	1	1	2	2	2	0	zinc-ribbon
zinc_ribbon_2	PF13240.6	gi|429217267|ref|YP_007175257.1|	-	0.38	10.5	3.4	0.74	9.6	0.3	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
MazE_antitoxin	PF04014.18	gi|429217268|ref|YP_007175258.1|	-	2.5e-12	46.4	0.0	5.9e-12	45.2	0.0	1.7	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE,	bacterial	antitoxin
DUF2120	PF09893.9	gi|429217268|ref|YP_007175258.1|	-	0.034	14.3	3.5	0.065	13.3	3.5	1.5	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2120)
POR	PF01558.18	gi|429217269|ref|YP_007175259.1|	-	4.5e-42	144.1	0.1	5.2e-42	143.9	0.1	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
DUF1360	PF07098.11	gi|429217269|ref|YP_007175259.1|	-	0.13	12.2	0.0	0.21	11.5	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1360)
Fer4	PF00037.27	gi|429217270|ref|YP_007175260.1|	-	1.1e-14	53.5	14.9	1.1e-07	31.3	3.1	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|429217270|ref|YP_007175260.1|	-	2.5e-10	40.3	9.2	5e-10	39.4	9.3	1.5	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|429217270|ref|YP_007175260.1|	-	1.4e-09	38.7	10.2	8.5e-05	23.4	1.0	2.2	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_10	PF13237.6	gi|429217270|ref|YP_007175260.1|	-	5e-09	36.1	9.8	7.6e-09	35.6	9.8	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|429217270|ref|YP_007175260.1|	-	7.1e-09	36.1	10.9	1.6e-08	35.0	11.1	1.5	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|429217270|ref|YP_007175260.1|	-	2.2e-08	34.2	9.5	3.9e-08	33.3	9.6	1.4	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|429217270|ref|YP_007175260.1|	-	3.2e-08	33.2	12.9	0.00077	19.4	3.2	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|429217270|ref|YP_007175260.1|	-	6.8e-08	32.3	15.1	0.00046	20.1	4.0	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|429217270|ref|YP_007175260.1|	-	3.9e-05	24.0	9.7	5.9e-05	23.4	9.7	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|429217270|ref|YP_007175260.1|	-	5.7e-05	23.6	10.0	0.00086	19.8	0.7	2.5	2	1	1	3	3	3	2	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_17	PF13534.6	gi|429217270|ref|YP_007175260.1|	-	0.00051	20.5	13.0	0.0027	18.2	13.2	1.9	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|429217270|ref|YP_007175260.1|	-	0.00061	20.1	10.1	0.035	14.6	1.6	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_15	PF13459.6	gi|429217270|ref|YP_007175260.1|	-	0.0093	16.7	13.6	0.59	10.9	13.6	2.7	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_22	PF17179.4	gi|429217270|ref|YP_007175260.1|	-	0.015	16.2	11.5	0.022	15.6	2.3	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|429217270|ref|YP_007175260.1|	-	0.54	10.5	9.5	1.6	8.9	1.3	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
MqsA_antitoxin	PF15731.5	gi|429217270|ref|YP_007175260.1|	-	0.65	10.1	4.4	1.9	8.6	3.4	1.9	1	1	1	2	2	2	0	Antitoxin	component	of	bacterial	toxin-antitoxin	system,	MqsA
Fer4_3	PF12798.7	gi|429217270|ref|YP_007175260.1|	-	1.3	10.1	17.5	1	10.5	7.1	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
ETF_QO	PF05187.13	gi|429217270|ref|YP_007175260.1|	-	4.7	7.4	7.7	6.4	7.0	1.6	2.2	1	1	1	2	2	2	0	Electron	transfer	flavoprotein-ubiquinone	oxidoreductase,	4Fe-4S
POR_N	PF01855.19	gi|429217271|ref|YP_007175261.1|	-	3e-71	239.9	0.6	4e-71	239.4	0.6	1.1	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
PFOR_II	PF17147.4	gi|429217271|ref|YP_007175261.1|	-	8.2e-23	80.7	0.0	1.5e-22	79.8	0.0	1.5	1	0	0	1	1	1	1	Pyruvate:ferredoxin	oxidoreductase	core	domain	II
TPP_enzyme_C	PF02775.21	gi|429217272|ref|YP_007175262.1|	-	1.4e-26	93.1	0.1	2e-26	92.6	0.1	1.2	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
DXP_synthase_N	PF13292.6	gi|429217272|ref|YP_007175262.1|	-	0.1	11.8	0.2	0.18	11.0	0.2	1.3	1	0	0	1	1	1	0	1-deoxy-D-xylulose-5-phosphate	synthase
CN_hydrolase	PF00795.22	gi|429217273|ref|YP_007175263.1|	-	2e-09	37.2	0.0	2.4e-09	36.9	0.0	1.1	1	0	0	1	1	1	1	Carbon-nitrogen	hydrolase
DNA_pol_B	PF00136.21	gi|429217274|ref|YP_007175264.1|	-	2.7e-17	62.7	5.7	2.7e-16	59.4	5.7	2.3	1	1	0	1	1	1	1	DNA	polymerase	family	B
TehB	PF03848.14	gi|429217274|ref|YP_007175264.1|	-	0.67	9.3	9.9	0.037	13.4	1.0	3.1	4	0	0	4	4	4	0	Tellurite	resistance	protein	TehB
2-Hacid_dh_C	PF02826.19	gi|429217277|ref|YP_007175267.1|	-	4.9e-65	218.2	0.0	6.8e-65	217.7	0.0	1.2	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.30	gi|429217277|ref|YP_007175267.1|	-	8.8e-34	116.1	0.0	1.2e-33	115.6	0.0	1.2	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
NAD_binding_2	PF03446.15	gi|429217277|ref|YP_007175267.1|	-	4e-05	23.8	0.3	8.4e-05	22.8	0.1	1.5	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
IlvN	PF07991.12	gi|429217277|ref|YP_007175267.1|	-	8e-05	22.3	0.3	0.00038	20.0	0.0	2.0	2	1	0	2	2	2	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
F420_oxidored	PF03807.17	gi|429217277|ref|YP_007175267.1|	-	0.0045	17.5	0.0	0.0095	16.5	0.0	1.6	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
AlaDh_PNT_C	PF01262.21	gi|429217277|ref|YP_007175267.1|	-	0.0049	16.2	0.0	0.014	14.7	0.0	1.7	1	1	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
NAD_binding_7	PF13241.6	gi|429217277|ref|YP_007175267.1|	-	0.012	16.0	0.0	0.033	14.6	0.0	1.6	2	0	0	2	2	2	0	Putative	NAD(P)-binding
HTH_24	PF13412.6	gi|429217278|ref|YP_007175268.1|	-	1.2e-08	34.4	1.0	3.6e-08	32.8	0.1	2.3	3	0	0	3	3	3	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.19	gi|429217278|ref|YP_007175268.1|	-	8.4e-06	25.6	0.1	1.4e-05	24.9	0.1	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.10	gi|429217278|ref|YP_007175268.1|	-	0.0001	22.0	0.0	0.00018	21.3	0.0	1.4	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_5	PF01022.20	gi|429217278|ref|YP_007175268.1|	-	0.00089	19.1	0.0	0.0016	18.3	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_27	PF13463.6	gi|429217278|ref|YP_007175268.1|	-	0.0047	17.4	0.0	0.0086	16.5	0.0	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.7	gi|429217278|ref|YP_007175268.1|	-	0.0068	16.3	0.0	0.011	15.6	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_20	PF12840.7	gi|429217278|ref|YP_007175268.1|	-	0.0097	15.9	0.0	0.015	15.4	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
BatD	PF13584.6	gi|429217278|ref|YP_007175268.1|	-	0.053	12.3	0.9	0.23	10.2	0.5	1.9	1	1	1	2	2	2	0	Oxygen	tolerance
SIT	PF15330.6	gi|429217278|ref|YP_007175268.1|	-	0.17	12.3	0.1	0.17	12.3	0.1	1.9	2	0	0	2	2	2	0	SHP2-interacting	transmembrane	adaptor	protein,	SIT
DUF2897	PF11446.8	gi|429217278|ref|YP_007175268.1|	-	0.18	11.7	3.2	0.39	10.6	3.2	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2897)
JTB	PF05439.12	gi|429217278|ref|YP_007175268.1|	-	0.2	11.7	0.1	0.36	10.9	0.1	1.3	1	0	0	1	1	1	0	Jumping	translocation	breakpoint	protein	(JTB)
TMEM100	PF16311.5	gi|429217278|ref|YP_007175268.1|	-	0.21	11.2	0.5	1.1	8.8	0.0	2.1	2	0	0	2	2	2	0	Transmembrane	protein	100
DUF3169	PF11368.8	gi|429217278|ref|YP_007175268.1|	-	1.4	8.4	12.5	0.054	13.0	1.1	2.4	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3169)
Vpu	PF00558.19	gi|429217278|ref|YP_007175268.1|	-	7.3	6.4	9.3	3.1	7.6	2.8	2.5	3	0	0	3	3	2	0	Vpu	protein
TMEM154	PF15102.6	gi|429217278|ref|YP_007175268.1|	-	8.7	6.3	8.1	0.22	11.4	0.7	1.9	2	0	0	2	2	2	0	TMEM154	protein	family
Peptidase_M48	PF01435.18	gi|429217279|ref|YP_007175269.1|	-	1.9e-33	115.9	0.0	4.2e-33	114.8	0.0	1.6	1	0	0	1	1	1	1	Peptidase	family	M48
Peptidase_M56	PF05569.11	gi|429217279|ref|YP_007175269.1|	-	0.00096	18.4	3.5	0.0032	16.7	1.0	2.6	2	1	0	2	2	2	1	BlaR1	peptidase	M56
DUF4328	PF14219.6	gi|429217279|ref|YP_007175269.1|	-	0.41	10.2	2.8	1.2	8.6	1.0	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4328)
Yip1	PF04893.17	gi|429217279|ref|YP_007175269.1|	-	1	9.0	24.9	0.3	10.8	0.2	3.1	2	1	1	3	3	3	0	Yip1	domain
Pilin_N	PF07790.11	gi|429217279|ref|YP_007175269.1|	-	2.6	9.0	10.3	8.7	7.3	0.0	4.0	4	0	0	4	4	4	0	Archaeal	Type	IV	pilin,	N-terminal
MARVEL	PF01284.23	gi|429217279|ref|YP_007175269.1|	-	7.9	6.5	14.0	1.3	9.1	8.7	2.1	2	0	0	2	2	2	0	Membrane-associating	domain
Virul_fac_BrkB	PF03631.15	gi|429217279|ref|YP_007175269.1|	-	8.9	5.8	22.7	5.4	6.5	0.7	2.3	2	0	0	2	2	2	0	Virulence	factor	BrkB
Cytidylate_kin2	PF13189.6	gi|429217280|ref|YP_007175270.1|	-	1.5e-19	70.8	0.3	2.6e-17	63.6	0.3	2.1	1	1	0	1	1	1	1	Cytidylate	kinase-like	family
AAA_17	PF13207.6	gi|429217280|ref|YP_007175270.1|	-	1.4e-13	51.4	0.0	2.3e-13	50.7	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.6	gi|429217280|ref|YP_007175270.1|	-	7.9e-13	49.1	0.0	1.1e-12	48.6	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
Cytidylate_kin	PF02224.18	gi|429217280|ref|YP_007175270.1|	-	8.1e-10	38.8	0.6	1.3e-06	28.3	0.0	2.3	1	1	1	2	2	2	2	Cytidylate	kinase
AAA_28	PF13521.6	gi|429217280|ref|YP_007175270.1|	-	9.9e-06	25.9	0.0	1.4e-05	25.4	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.6	gi|429217280|ref|YP_007175270.1|	-	1.4e-05	25.3	0.0	2.1e-05	24.7	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
dNK	PF01712.19	gi|429217280|ref|YP_007175270.1|	-	3.2e-05	23.9	0.3	0.039	13.8	0.0	2.2	1	1	0	2	2	2	2	Deoxynucleoside	kinase
SKI	PF01202.22	gi|429217280|ref|YP_007175270.1|	-	0.0001	22.5	0.2	0.00025	21.2	0.2	1.7	1	1	0	1	1	1	1	Shikimate	kinase
KTI12	PF08433.10	gi|429217280|ref|YP_007175270.1|	-	0.00015	21.3	0.4	0.00081	18.9	0.4	2.1	1	1	0	1	1	1	1	Chromatin	associated	protein	KTI12
Rad17	PF03215.15	gi|429217280|ref|YP_007175270.1|	-	0.00016	21.6	0.1	0.0009	19.2	0.0	1.9	1	1	1	2	2	2	1	Rad17	P-loop	domain
AAA_16	PF13191.6	gi|429217280|ref|YP_007175270.1|	-	0.00027	21.4	0.0	0.00038	20.9	0.0	1.3	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA	PF00004.29	gi|429217280|ref|YP_007175270.1|	-	0.00035	21.0	0.0	0.00057	20.3	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
ADK	PF00406.22	gi|429217280|ref|YP_007175270.1|	-	0.00044	20.4	0.0	0.00076	19.6	0.0	1.5	1	1	0	1	1	1	1	Adenylate	kinase
AAA_22	PF13401.6	gi|429217280|ref|YP_007175270.1|	-	0.00049	20.4	0.0	0.00095	19.5	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
ATP_bind_2	PF03668.15	gi|429217280|ref|YP_007175270.1|	-	0.00098	18.5	0.1	0.0022	17.3	0.1	1.5	1	1	0	1	1	1	1	P-loop	ATPase	protein	family
RNA_helicase	PF00910.22	gi|429217280|ref|YP_007175270.1|	-	0.0015	18.9	0.0	0.0033	17.8	0.0	1.7	1	0	0	1	1	1	1	RNA	helicase
PRK	PF00485.18	gi|429217280|ref|YP_007175270.1|	-	0.0016	18.2	0.0	0.89	9.3	0.0	2.2	2	0	0	2	2	2	2	Phosphoribulokinase	/	Uridine	kinase	family
ATP_bind_1	PF03029.17	gi|429217280|ref|YP_007175270.1|	-	0.0017	18.2	0.1	0.052	13.3	0.0	2.1	2	0	0	2	2	2	1	Conserved	hypothetical	ATP	binding	protein
AAA_14	PF13173.6	gi|429217280|ref|YP_007175270.1|	-	0.0029	17.6	0.1	0.0066	16.5	0.1	1.5	1	1	0	1	1	1	1	AAA	domain
NACHT	PF05729.12	gi|429217280|ref|YP_007175270.1|	-	0.0034	17.3	0.0	0.0058	16.6	0.0	1.4	1	0	0	1	1	1	1	NACHT	domain
CoaE	PF01121.20	gi|429217280|ref|YP_007175270.1|	-	0.0037	17.0	0.1	1.2	8.8	0.0	2.2	1	1	1	2	2	2	2	Dephospho-CoA	kinase
AAA_5	PF07728.14	gi|429217280|ref|YP_007175270.1|	-	0.01	15.8	0.0	0.034	14.1	0.0	1.9	2	1	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
DUF2226	PF09987.9	gi|429217280|ref|YP_007175270.1|	-	0.017	14.5	2.1	0.022	14.1	0.6	1.7	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2226)
RuvB_N	PF05496.12	gi|429217280|ref|YP_007175270.1|	-	0.018	14.8	0.0	0.035	13.9	0.0	1.6	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
T2SSE	PF00437.20	gi|429217280|ref|YP_007175270.1|	-	0.02	14.0	0.0	0.039	13.0	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
Thymidylate_kin	PF02223.17	gi|429217280|ref|YP_007175270.1|	-	0.02	14.5	0.1	31	4.2	0.0	3.1	1	1	2	3	3	3	0	Thymidylate	kinase
NTPase_1	PF03266.15	gi|429217280|ref|YP_007175270.1|	-	0.021	14.8	0.0	0.037	13.9	0.0	1.5	1	1	0	1	1	1	0	NTPase
Zeta_toxin	PF06414.12	gi|429217280|ref|YP_007175270.1|	-	0.026	13.8	0.0	0.042	13.1	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
Viral_helicase1	PF01443.18	gi|429217280|ref|YP_007175270.1|	-	0.029	14.1	0.0	0.04	13.7	0.0	1.3	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
CobU	PF02283.16	gi|429217280|ref|YP_007175270.1|	-	0.029	13.9	0.1	0.092	12.3	0.1	1.9	1	1	0	1	1	1	0	Cobinamide	kinase	/	cobinamide	phosphate	guanyltransferase
Mg_chelatase	PF01078.21	gi|429217280|ref|YP_007175270.1|	-	0.035	13.5	0.0	0.06	12.7	0.0	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_24	PF13479.6	gi|429217280|ref|YP_007175270.1|	-	0.04	13.6	1.6	0.18	11.5	0.1	2.4	2	1	0	2	2	2	0	AAA	domain
RC-P840_PscD	PF10657.9	gi|429217280|ref|YP_007175270.1|	-	0.042	13.9	0.1	0.066	13.3	0.1	1.3	1	0	0	1	1	1	0	Photosystem	P840	reaction	centre	protein	PscD
AAA_30	PF13604.6	gi|429217280|ref|YP_007175270.1|	-	0.09	12.5	0.0	0.65	9.7	0.0	1.9	1	1	0	2	2	2	0	AAA	domain
Guanylate_kin	PF00625.21	gi|429217280|ref|YP_007175270.1|	-	0.1	12.3	2.1	5.6	6.6	0.0	3.0	1	1	2	3	3	3	0	Guanylate	kinase
ABC_tran	PF00005.27	gi|429217280|ref|YP_007175270.1|	-	0.15	12.5	0.0	0.21	12.1	0.0	1.3	1	1	0	1	1	1	0	ABC	transporter
AAA_23	PF13476.6	gi|429217280|ref|YP_007175270.1|	-	0.33	11.4	2.8	0.63	10.5	2.8	1.6	1	1	0	1	1	1	0	AAA	domain
Alba	PF01918.21	gi|429217281|ref|YP_007175271.1|	-	5.6e-19	67.7	1.7	8.7e-19	67.1	1.7	1.3	1	0	0	1	1	1	1	Alba
Rpp20	PF12328.8	gi|429217281|ref|YP_007175271.1|	-	0.24	11.3	5.2	3	7.8	5.2	2.0	1	1	0	1	1	1	0	Rpp20	subunit	of	nuclear	RNase	MRP	and	P
Vpu	PF00558.19	gi|429217282|ref|YP_007175272.1|	-	0.032	14.0	0.6	0.072	12.9	0.6	1.6	1	0	0	1	1	1	0	Vpu	protein
Methyltransf_14	PF08484.11	gi|429217282|ref|YP_007175272.1|	-	0.04	13.7	0.2	1.5	8.6	0.1	2.2	2	0	0	2	2	2	0	C-methyltransferase	C-terminal	domain
MazE_antitoxin	PF04014.18	gi|429217283|ref|YP_007175273.1|	-	5.6e-08	32.5	0.0	1.4e-07	31.2	0.0	1.7	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE,	bacterial	antitoxin
Gln-synt_C	PF00120.24	gi|429217284|ref|YP_007175274.1|	-	3.6e-119	397.8	0.0	4.3e-119	397.5	0.0	1.1	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.19	gi|429217284|ref|YP_007175274.1|	-	8.7e-21	73.5	0.1	3.4e-20	71.6	0.0	2.0	2	0	0	2	2	2	1	Glutamine	synthetase,	beta-Grasp	domain
DUF4427	PF14468.6	gi|429217284|ref|YP_007175274.1|	-	0.076	13.1	0.0	0.17	12.0	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4427)
Fer4_13	PF13370.6	gi|429217285|ref|YP_007175275.1|	-	2e-17	63.4	2.0	2.7e-17	63.0	2.0	1.2	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_15	PF13459.6	gi|429217285|ref|YP_007175275.1|	-	7.3e-14	52.3	3.0	9e-14	52.0	3.0	1.1	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4	PF00037.27	gi|429217285|ref|YP_007175275.1|	-	0.41	10.6	4.7	2.3	8.2	0.7	2.8	3	0	0	3	3	3	0	4Fe-4S	binding	domain
PAC2	PF09754.9	gi|429217286|ref|YP_007175276.1|	-	1.2e-34	120.3	0.1	1.3e-34	120.1	0.1	1.0	1	0	0	1	1	1	1	PAC2	family
DUF296	PF03479.15	gi|429217286|ref|YP_007175276.1|	-	0.17	12.3	0.0	0.23	11.9	0.0	1.3	1	0	0	1	1	1	0	Plants	and	Prokaryotes	Conserved	(PCC)	domain
HSP20	PF00011.21	gi|429217287|ref|YP_007175277.1|	-	5.6e-06	26.4	0.0	7.5e-06	26.0	0.0	1.2	1	0	0	1	1	1	1	Hsp20/alpha	crystallin	family
ArsA_HSP20	PF17886.1	gi|429217287|ref|YP_007175277.1|	-	0.0028	17.2	0.1	0.13	11.8	0.1	2.4	1	1	0	1	1	1	1	HSP20-like	domain	found	in	ArsA
CCG	PF02754.16	gi|429217288|ref|YP_007175278.1|	-	4.5e-24	84.5	0.1	6.3e-13	48.7	0.0	2.5	2	0	0	2	2	2	2	Cysteine-rich	domain
Fer4_10	PF13237.6	gi|429217288|ref|YP_007175278.1|	-	1.6e-10	40.9	7.3	1.6e-10	40.9	7.3	2.1	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|429217288|ref|YP_007175278.1|	-	1.7e-09	38.0	9.0	1.5e-08	35.0	9.3	2.3	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|429217288|ref|YP_007175278.1|	-	1.9e-09	37.5	6.0	1.9e-09	37.5	6.0	2.0	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|429217288|ref|YP_007175278.1|	-	2.2e-07	30.6	13.6	0.00019	21.3	3.2	2.8	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Nitrate_red_gam	PF02665.14	gi|429217288|ref|YP_007175278.1|	-	5.1e-07	29.5	5.7	9e-07	28.7	5.7	1.3	1	0	0	1	1	1	1	Nitrate	reductase	gamma	subunit
Fer4_7	PF12838.7	gi|429217288|ref|YP_007175278.1|	-	9.1e-07	29.4	11.6	3.4e-05	24.4	12.9	2.5	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|429217288|ref|YP_007175278.1|	-	3.1e-06	27.0	16.0	3.7e-05	23.6	3.9	2.8	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|429217288|ref|YP_007175278.1|	-	8.6e-06	26.2	9.3	0.00025	21.5	10.6	2.6	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|429217288|ref|YP_007175278.1|	-	2.5e-05	25.1	8.8	0.00035	21.5	10.0	2.3	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4	PF00037.27	gi|429217288|ref|YP_007175278.1|	-	6.8e-05	22.5	22.4	0.00011	21.9	2.6	2.8	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_22	PF17179.4	gi|429217288|ref|YP_007175278.1|	-	0.00015	22.5	5.2	0.04	14.8	0.5	2.8	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|429217288|ref|YP_007175278.1|	-	0.00074	19.8	18.6	0.0057	17.1	2.7	2.7	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_15	PF13459.6	gi|429217288|ref|YP_007175278.1|	-	0.00086	20.0	3.4	0.29	11.9	0.5	2.5	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.6	gi|429217288|ref|YP_007175278.1|	-	0.022	15.0	12.0	0.76	10.0	1.3	3.3	2	1	0	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|429217288|ref|YP_007175278.1|	-	0.037	14.2	14.2	0.38	10.9	2.6	2.5	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|429217288|ref|YP_007175278.1|	-	2.1	9.0	14.6	1.7	9.2	4.9	2.5	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
DNA_pol_B	PF00136.21	gi|429217289|ref|YP_007175279.1|	-	3.6e-53	180.9	7.4	3.6e-53	180.9	7.4	2.0	2	0	0	2	2	2	1	DNA	polymerase	family	B
DNA_pol_B_exo1	PF03104.19	gi|429217289|ref|YP_007175279.1|	-	4.3e-34	118.1	4.2	4.3e-34	118.1	4.2	3.4	3	1	0	3	3	3	1	DNA	polymerase	family	B,	exonuclease	domain
RNase_H_2	PF13482.6	gi|429217289|ref|YP_007175279.1|	-	2.8e-06	27.4	2.4	8.4e-06	25.9	0.3	2.8	2	1	0	2	2	2	1	RNase_H	superfamily
DNA_pol_B_exo2	PF10108.9	gi|429217289|ref|YP_007175279.1|	-	0.001	18.8	0.0	0.001	18.8	0.0	2.1	2	0	0	2	2	2	1	Predicted	3'-5'	exonuclease	related	to	the	exonuclease	domain	of	PolB
Interferon	PF00143.19	gi|429217289|ref|YP_007175279.1|	-	0.56	10.4	8.5	0.46	10.6	0.7	2.7	3	0	0	3	3	3	0	Interferon	alpha/beta	domain
LIP	PF03583.14	gi|429217291|ref|YP_007175281.1|	-	0.013	14.8	0.2	0.013	14.8	0.2	1.5	2	0	0	2	2	2	0	Secretory	lipase
DUF3311	PF11755.8	gi|429217292|ref|YP_007175282.1|	-	9.2e-15	54.3	4.3	1.1e-14	54.1	4.3	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3311)
FeoB_associated	PF12669.7	gi|429217292|ref|YP_007175282.1|	-	2.3	8.7	3.6	9	6.8	0.9	2.1	2	0	0	2	2	2	0	FeoB-associated	Cys-rich	membrane	protein
DUF2283	PF10049.9	gi|429217293|ref|YP_007175283.1|	-	4.3e-09	36.5	0.4	5.6e-09	36.1	0.4	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2283)
LMWSLP_N	PF12211.8	gi|429217293|ref|YP_007175283.1|	-	0.085	12.5	0.2	0.085	12.5	0.2	1.0	1	0	0	1	1	1	0	Low	molecular	weight	S	layer	protein	N	terminal
HEPN_AbiU2	PF18734.1	gi|429217294|ref|YP_007175284.1|	-	0.0084	15.6	0.8	0.0084	15.6	0.8	2.0	1	1	1	2	2	2	1	AbiU2
SLATT_5	PF18160.1	gi|429217294|ref|YP_007175284.1|	-	0.017	14.4	2.4	0.026	13.8	2.4	1.4	1	0	0	1	1	1	0	SMODS	and	SLOG-associating	2TM	effector	domain	family	5
RasGAP_C	PF03836.15	gi|429217294|ref|YP_007175284.1|	-	0.037	14.2	3.3	0.13	12.4	1.0	2.1	1	1	1	2	2	2	0	RasGAP	C-terminus
PdxJ	PF03740.13	gi|429217294|ref|YP_007175284.1|	-	0.041	13.0	0.1	0.046	12.8	0.1	1.1	1	0	0	1	1	1	0	Pyridoxal	phosphate	biosynthesis	protein	PdxJ
Rac1	PF09632.10	gi|429217294|ref|YP_007175284.1|	-	0.059	12.5	1.1	4.5	6.4	0.1	2.2	1	1	1	2	2	2	0	Rac1-binding	domain
Lyase_1	PF00206.20	gi|429217294|ref|YP_007175284.1|	-	0.089	12.2	0.0	0.13	11.6	0.0	1.2	1	0	0	1	1	1	0	Lyase
DUF2070	PF09843.9	gi|429217294|ref|YP_007175284.1|	-	0.12	10.6	1.1	2.3	6.4	0.1	2.0	1	1	1	2	2	2	0	Predicted	membrane	protein	(DUF2070)
Molydop_binding	PF01568.21	gi|429217295|ref|YP_007175285.1|	-	0.0046	17.0	0.1	0.49	10.4	0.0	2.1	1	1	1	2	2	2	2	Molydopterin	dinucleotide	binding	domain
Ubiquitin_5	PF18037.1	gi|429217295|ref|YP_007175285.1|	-	0.023	15.0	2.7	0.066	13.6	2.6	1.9	1	1	0	1	1	1	0	Ubiquitin-like	domain
CDC48_N	PF02359.18	gi|429217295|ref|YP_007175285.1|	-	0.071	13.3	0.2	5.9	7.1	0.0	2.2	1	1	1	2	2	2	0	Cell	division	protein	48	(CDC48),	N-terminal	domain
HGTP_anticodon	PF03129.20	gi|429217296|ref|YP_007175286.1|	-	1.6e-23	82.6	0.0	4.2e-23	81.3	0.0	1.8	1	0	0	1	1	1	1	Anticodon	binding	domain
tRNA-synt_2b	PF00587.25	gi|429217296|ref|YP_007175286.1|	-	1.5e-07	31.5	0.0	6.5e-07	29.5	0.0	2.1	1	1	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
Rad50_zn_hook	PF04423.14	gi|429217296|ref|YP_007175286.1|	-	0.03	14.2	0.9	0.071	13.0	0.1	2.1	2	0	0	2	2	2	0	Rad50	zinc	hook	motif
zf-RING_7	PF02591.15	gi|429217296|ref|YP_007175286.1|	-	0.081	13.1	0.8	0.21	11.8	0.1	2.0	2	0	0	2	2	2	0	C4-type	zinc	ribbon	domain
Arginase	PF00491.21	gi|429217297|ref|YP_007175287.1|	-	1.9e-77	260.5	0.0	2.1e-77	260.4	0.0	1.0	1	0	0	1	1	1	1	Arginase	family
DNA_RNApol_7kD	PF03604.13	gi|429217298|ref|YP_007175288.1|	-	0.00049	19.7	7.0	0.00056	19.5	5.0	2.1	2	1	0	2	2	2	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
HypA	PF01155.19	gi|429217298|ref|YP_007175288.1|	-	0.00079	19.4	0.1	0.00089	19.3	0.1	1.1	1	0	0	1	1	1	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
OrfB_Zn_ribbon	PF07282.11	gi|429217298|ref|YP_007175288.1|	-	0.0014	18.5	1.1	0.0021	18.0	1.1	1.3	1	1	0	1	1	1	1	Putative	transposase	DNA-binding	domain
zinc_ribbon_2	PF13240.6	gi|429217298|ref|YP_007175288.1|	-	0.0017	18.0	2.7	0.2	11.4	2.7	2.4	1	1	1	2	2	2	2	zinc-ribbon	domain
zf-NADH-PPase	PF09297.11	gi|429217298|ref|YP_007175288.1|	-	0.0035	17.0	1.0	0.015	14.9	0.2	2.0	2	0	0	2	2	2	1	NADH	pyrophosphatase	zinc	ribbon	domain
IBR	PF01485.21	gi|429217298|ref|YP_007175288.1|	-	0.0058	16.8	0.2	0.007	16.6	0.2	1.1	1	0	0	1	1	1	1	IBR	domain,	a	half	RING-finger	domain
zf-Mss51	PF13824.6	gi|429217298|ref|YP_007175288.1|	-	0.01	15.9	1.7	1.3	9.2	0.1	2.2	1	1	1	2	2	2	2	Zinc-finger	of	mitochondrial	splicing	suppressor	51
DZR	PF12773.7	gi|429217298|ref|YP_007175288.1|	-	0.013	15.5	0.4	0.041	13.9	0.4	1.8	1	1	0	1	1	1	0	Double	zinc	ribbon
TFIIS_C	PF01096.18	gi|429217298|ref|YP_007175288.1|	-	0.019	14.8	1.4	1.9	8.4	0.1	2.4	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
RNHCP	PF12647.7	gi|429217298|ref|YP_007175288.1|	-	0.029	14.3	0.1	0.039	13.9	0.1	1.2	1	0	0	1	1	1	0	RNHCP	domain
zf_UBZ	PF18439.1	gi|429217298|ref|YP_007175288.1|	-	0.033	13.8	0.9	6.3	6.5	0.0	2.2	2	0	0	2	2	2	0	Ubiquitin-Binding	Zinc	Finger
TF_Zn_Ribbon	PF08271.12	gi|429217298|ref|YP_007175288.1|	-	0.093	12.3	1.4	11	5.6	0.2	2.4	2	0	0	2	2	2	0	TFIIB	zinc-binding
Ogr_Delta	PF04606.12	gi|429217298|ref|YP_007175288.1|	-	0.11	12.5	1.4	3.1	7.9	0.2	2.1	2	0	0	2	2	2	0	Ogr/Delta-like	zinc	finger
Zn_Tnp_IS1595	PF12760.7	gi|429217298|ref|YP_007175288.1|	-	0.19	11.8	3.2	1.1	9.2	0.4	2.2	1	1	0	2	2	2	0	Transposase	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|429217298|ref|YP_007175288.1|	-	0.21	11.1	3.5	3.8	7.1	0.1	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
Lar_restr_allev	PF14354.6	gi|429217298|ref|YP_007175288.1|	-	0.45	10.9	3.0	15	6.1	3.0	2.1	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
SUI1	PF01253.22	gi|429217299|ref|YP_007175289.1|	-	6.6e-21	74.6	1.4	8.5e-21	74.3	1.4	1.1	1	0	0	1	1	1	1	Translation	initiation	factor	SUI1
Img2	PF05046.14	gi|429217299|ref|YP_007175289.1|	-	0.0029	17.8	0.3	0.0041	17.4	0.3	1.3	1	1	0	1	1	1	1	Mitochondrial	large	subunit	ribosomal	protein	(Img2)
MAP	PF03642.13	gi|429217299|ref|YP_007175289.1|	-	0.052	13.9	0.3	0.1	12.9	0.1	1.6	1	1	0	1	1	1	0	MAP	domain
TEX33	PF15400.6	gi|429217299|ref|YP_007175289.1|	-	0.065	13.7	0.0	0.091	13.3	0.0	1.2	1	0	0	1	1	1	0	Testis-expressed	sequence	33	protein	family
DBI_PRT	PF02277.17	gi|429217300|ref|YP_007175290.1|	-	7.1e-06	25.5	0.0	9.8e-06	25.0	0.0	1.1	1	0	0	1	1	1	1	Phosphoribosyltransferase
CbiZ	PF01955.18	gi|429217301|ref|YP_007175291.1|	-	7.8e-33	114.2	0.0	9.8e-33	113.9	0.0	1.1	1	0	0	1	1	1	1	Adenosylcobinamide	amidohydrolase
NTP_transf_3	PF12804.7	gi|429217302|ref|YP_007175292.1|	-	5.1e-11	43.2	0.0	8.6e-11	42.5	0.0	1.4	1	1	0	1	1	1	1	MobA-like	NTP	transferase	domain
CofC	PF01983.16	gi|429217302|ref|YP_007175292.1|	-	0.00016	20.9	2.6	0.00018	20.8	2.1	1.4	1	1	0	1	1	1	1	Guanylyl	transferase	CofC	like
UPF0113	PF03657.13	gi|429217302|ref|YP_007175292.1|	-	0.015	15.5	0.8	0.54	10.5	0.1	2.4	2	0	0	2	2	2	0	UPF0113	PUA	domain
IspD	PF01128.19	gi|429217302|ref|YP_007175292.1|	-	0.02	14.6	0.0	0.058	13.1	0.0	1.8	2	1	0	2	2	2	0	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
CTP_transf_3	PF02348.19	gi|429217302|ref|YP_007175292.1|	-	0.029	14.3	0.2	0.059	13.3	0.2	1.6	1	1	0	1	1	1	0	Cytidylyltransferase
NTP_transferase	PF00483.23	gi|429217302|ref|YP_007175292.1|	-	0.03	13.9	0.0	0.046	13.3	0.0	1.5	1	1	0	1	1	1	0	Nucleotidyl	transferase
Aminotran_1_2	PF00155.21	gi|429217303|ref|YP_007175293.1|	-	3.4e-24	85.7	0.0	3.9e-24	85.5	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
DUF4930	PF16284.5	gi|429217303|ref|YP_007175293.1|	-	0.15	12.1	0.2	0.15	12.1	0.2	2.1	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4930)
CobS	PF02654.15	gi|429217304|ref|YP_007175294.1|	-	5.1e-36	124.8	0.1	5.9e-36	124.6	0.1	1.0	1	0	0	1	1	1	1	Cobalamin-5-phosphate	synthase
2TM	PF13239.6	gi|429217304|ref|YP_007175294.1|	-	0.049	13.9	1.6	0.049	13.9	1.6	2.9	3	0	0	3	3	3	0	2TM	domain
Cpta_toxin	PF07254.12	gi|429217304|ref|YP_007175294.1|	-	0.13	12.2	0.9	0.95	9.5	0.5	2.1	2	0	0	2	2	2	0	Membrane-bound	toxin	component	of	toxin-antitoxin	system
JAMP	PF05571.12	gi|429217304|ref|YP_007175294.1|	-	0.74	9.4	7.8	0.56	9.8	0.1	2.1	2	0	0	2	2	2	0	JNK1/MAPK8-associated	membrane	protein
RseC_MucC	PF04246.12	gi|429217304|ref|YP_007175294.1|	-	5.9	6.8	7.6	0.43	10.5	0.2	2.5	3	0	0	3	3	3	0	Positive	regulator	of	sigma(E),	RseC/MucC
CobD_Cbib	PF03186.13	gi|429217305|ref|YP_007175295.1|	-	9.2e-74	248.1	0.0	1.1e-73	247.9	0.0	1.1	1	0	0	1	1	1	1	CobD/Cbib	protein
TMEM154	PF15102.6	gi|429217305|ref|YP_007175295.1|	-	0.31	10.9	0.0	0.31	10.9	0.0	2.4	3	1	0	3	3	3	0	TMEM154	protein	family
Asn_synthase	PF00733.21	gi|429217306|ref|YP_007175296.1|	-	1.9e-15	57.4	0.0	1e-14	55.0	0.0	1.7	1	1	1	2	2	2	1	Asparagine	synthase
Rad50_zn_hook	PF04423.14	gi|429217306|ref|YP_007175296.1|	-	0.61	10.0	4.8	0.21	11.4	0.8	2.4	2	0	0	2	2	2	0	Rad50	zinc	hook	motif
DUF72	PF01904.18	gi|429217307|ref|YP_007175297.1|	-	4.4e-43	147.9	0.8	5.5e-43	147.6	0.8	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF72
Bacteriocin_IIi	PF11758.8	gi|429217307|ref|YP_007175297.1|	-	0.083	12.7	2.7	8.6	6.3	0.1	2.8	3	0	0	3	3	3	0	Aureocin-like	type	II	bacteriocin
SF3A3	PF16837.5	gi|429217307|ref|YP_007175297.1|	-	0.34	11.4	4.8	0.17	12.4	1.5	2.2	2	2	0	2	2	2	0	Pre-mRNA-splicing	factor	SF3A3,	of	SF3a	complex,	Prp9
DUF2250	PF10007.9	gi|429217308|ref|YP_007175298.1|	-	9e-51	170.0	10.9	2.7e-29	101.1	1.0	2.1	2	0	0	2	2	2	2	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
TrmB	PF01978.19	gi|429217308|ref|YP_007175298.1|	-	2.1e-08	33.9	0.5	0.0029	17.5	0.1	2.3	2	0	0	2	2	2	2	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.22	gi|429217308|ref|YP_007175298.1|	-	6.4e-06	26.0	0.4	6.9e-05	22.7	0.0	2.3	2	0	0	2	2	2	1	MarR	family
MarR_2	PF12802.7	gi|429217308|ref|YP_007175298.1|	-	4.2e-05	23.4	0.0	0.022	14.7	0.0	2.3	2	0	0	2	2	2	2	MarR	family
DUF4423	PF14394.6	gi|429217308|ref|YP_007175298.1|	-	0.00028	20.6	0.7	0.007	16.1	0.1	2.2	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4423)
HTH_27	PF13463.6	gi|429217308|ref|YP_007175298.1|	-	0.00071	20.0	0.9	2.3	8.8	0.0	3.2	3	0	0	3	3	3	2	Winged	helix	DNA-binding	domain
HTH_Crp_2	PF13545.6	gi|429217308|ref|YP_007175298.1|	-	0.0037	17.2	0.7	0.035	14.1	0.1	2.6	3	0	0	3	3	3	1	Crp-like	helix-turn-helix	domain
HTH_5	PF01022.20	gi|429217308|ref|YP_007175298.1|	-	0.0054	16.6	0.3	0.45	10.4	0.0	2.4	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_CodY	PF08222.11	gi|429217308|ref|YP_007175298.1|	-	0.026	14.1	0.3	0.37	10.4	0.1	2.4	2	0	0	2	2	2	0	CodY	helix-turn-helix	domain
B-block_TFIIIC	PF04182.12	gi|429217308|ref|YP_007175298.1|	-	0.027	14.6	0.3	2.4	8.4	0.0	2.4	2	0	0	2	2	2	0	B-block	binding	subunit	of	TFIIIC
HTH_36	PF13730.6	gi|429217308|ref|YP_007175298.1|	-	0.03	14.3	1.9	5.6	7.0	0.1	2.8	3	0	0	3	3	2	0	Helix-turn-helix	domain
GntR	PF00392.21	gi|429217308|ref|YP_007175298.1|	-	0.031	13.9	0.0	0.087	12.5	0.0	1.8	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
Fe_dep_repress	PF01325.19	gi|429217308|ref|YP_007175298.1|	-	0.059	13.6	0.0	0.83	9.9	0.0	2.5	2	0	0	2	2	2	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Rrf2	PF02082.20	gi|429217308|ref|YP_007175298.1|	-	0.061	13.7	0.1	2.7	8.4	0.0	2.4	2	0	0	2	2	2	0	Transcriptional	regulator
DUF3837	PF12939.7	gi|429217308|ref|YP_007175298.1|	-	0.13	12.7	2.3	0.3	11.5	0.3	2.4	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF3837)
BLACT_WH	PF17778.1	gi|429217308|ref|YP_007175298.1|	-	0.13	12.2	1.0	12	6.0	0.1	2.7	2	0	0	2	2	2	0	Beta-lactamase	associated	winged	helix	domain
PAP2	PF01569.21	gi|429217309|ref|YP_007175299.1|	-	7.4e-21	74.3	7.5	7.4e-21	74.3	7.5	1.8	2	1	0	2	2	2	1	PAP2	superfamily
PAP2_3	PF14378.6	gi|429217309|ref|YP_007175299.1|	-	2.2e-11	43.8	6.4	3.8e-11	43.0	6.4	1.5	1	0	0	1	1	1	1	PAP2	superfamily
PAP2_C	PF14360.6	gi|429217309|ref|YP_007175299.1|	-	0.0018	18.8	4.5	0.0018	18.8	4.5	2.9	3	1	0	3	3	3	1	PAP2	superfamily	C-terminal
DUF212	PF02681.14	gi|429217309|ref|YP_007175299.1|	-	0.012	15.8	1.7	0.023	14.8	0.8	1.9	1	1	0	1	1	1	0	Divergent	PAP2	family
ThrE	PF06738.12	gi|429217309|ref|YP_007175299.1|	-	0.44	9.9	11.9	0.34	10.2	3.9	2.3	1	1	0	2	2	2	0	Putative	threonine/serine	exporter
NiFe_hyd_3_EhaA	PF17367.2	gi|429217309|ref|YP_007175299.1|	-	0.73	10.0	14.3	0.27	11.4	1.2	3.0	3	1	0	3	3	3	0	NiFe-hydrogenase-type-3	Eha	complex	subunit	A
Jagunal	PF07086.12	gi|429217309|ref|YP_007175299.1|	-	4.2	7.4	15.6	16	5.5	9.5	2.3	1	1	1	2	2	2	0	Jagunal,	ER	re-organisation	during	oogenesis
AA_permease_2	PF13520.6	gi|429217310|ref|YP_007175300.1|	-	3.5e-36	125.0	64.8	3.5e-36	125.0	64.8	2.2	1	1	1	2	2	2	1	Amino	acid	permease
AA_permease	PF00324.21	gi|429217310|ref|YP_007175300.1|	-	4.8e-23	81.5	53.5	4.8e-23	81.5	53.5	2.5	1	1	1	2	2	2	1	Amino	acid	permease
ODV-E18	PF10717.9	gi|429217310|ref|YP_007175300.1|	-	0.12	12.2	0.1	0.12	12.2	0.1	3.5	3	0	0	3	3	3	0	Occlusion-derived	virus	envelope	protein	ODV-E18
Acyl-CoA_dh_1	PF00441.24	gi|429217311|ref|YP_007175301.1|	-	9.3e-45	152.5	2.9	1.3e-44	152.0	2.9	1.2	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.16	gi|429217311|ref|YP_007175301.1|	-	1e-33	116.3	0.0	2.5e-33	115.1	0.0	1.7	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_M	PF02770.19	gi|429217311|ref|YP_007175301.1|	-	1.1e-24	86.5	0.0	2e-24	85.6	0.0	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.11	gi|429217311|ref|YP_007175301.1|	-	5.8e-18	65.5	0.4	1.9e-17	63.8	0.7	1.7	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
HpaB_N	PF11794.8	gi|429217311|ref|YP_007175301.1|	-	2.3e-05	24.2	0.2	8.6e-05	22.3	0.2	1.8	1	1	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
DUF2192	PF09958.9	gi|429217312|ref|YP_007175302.1|	-	2.2e-81	272.7	3.8	2.7e-81	272.5	3.8	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2192)
Retrotran_gag_2	PF14223.6	gi|429217312|ref|YP_007175302.1|	-	0.0025	17.5	0.8	0.012	15.2	0.1	2.1	2	0	0	2	2	2	1	gag-polypeptide	of	LTR	copia-type
PGP_phosphatase	PF09419.10	gi|429217313|ref|YP_007175303.1|	-	0.11	12.1	0.0	0.12	12.0	0.0	1.1	1	0	0	1	1	1	0	Mitochondrial	PGP	phosphatase
SpoIIM	PF01944.17	gi|429217314|ref|YP_007175304.1|	-	2.5e-15	56.8	23.5	1.2e-14	54.7	23.8	1.7	1	1	0	1	1	1	1	Stage	II	sporulation	protein	M
DHBP_synthase	PF00926.19	gi|429217316|ref|YP_007175306.1|	-	5.8e-49	166.2	0.0	6.9e-49	166.0	0.0	1.1	1	0	0	1	1	1	1	3,4-dihydroxy-2-butanone	4-phosphate	synthase
DUF3187	PF11383.8	gi|429217316|ref|YP_007175306.1|	-	0.21	10.8	0.0	0.27	10.4	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3187)
DMRL_synthase	PF00885.19	gi|429217317|ref|YP_007175307.1|	-	6.4e-09	35.8	0.0	7.4e-09	35.6	0.0	1.1	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
DUF1003	PF06210.11	gi|429217317|ref|YP_007175307.1|	-	0.11	12.6	0.0	0.15	12.1	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1003)
Adeno_100	PF02438.16	gi|429217317|ref|YP_007175307.1|	-	0.19	9.8	0.0	0.24	9.6	0.0	1.1	1	0	0	1	1	1	0	Late	100kD	protein
EamA	PF00892.20	gi|429217318|ref|YP_007175308.1|	-	4.2e-32	111.2	52.4	1.4e-16	60.9	21.7	2.3	2	1	0	2	2	2	2	EamA-like	transporter	family
TPT	PF03151.16	gi|429217318|ref|YP_007175308.1|	-	9.5e-05	21.9	22.6	0.00038	19.9	22.6	1.9	1	1	0	1	1	1	1	Triose-phosphate	Transporter	family
DUF2286	PF10051.9	gi|429217319|ref|YP_007175309.1|	-	1.6e-52	176.9	3.6	1.9e-52	176.7	3.6	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2286)
MarC	PF01914.17	gi|429217320|ref|YP_007175310.1|	-	4.9e-31	107.7	13.7	5.6e-31	107.5	13.7	1.0	1	0	0	1	1	1	1	MarC	family	integral	membrane	protein
EFP_N	PF08207.12	gi|429217321|ref|YP_007175311.1|	-	1.7e-06	28.0	0.1	4.4e-06	26.6	0.1	1.8	2	0	0	2	2	2	1	Elongation	factor	P	(EF-P)	KOW-like	domain
eIF-5a	PF01287.20	gi|429217321|ref|YP_007175311.1|	-	2.5e-06	27.5	0.2	4.8e-06	26.6	0.2	1.5	1	0	0	1	1	1	1	Eukaryotic	elongation	factor	5A	hypusine,	DNA-binding	OB	fold
EFP	PF01132.20	gi|429217321|ref|YP_007175311.1|	-	0.0019	18.2	0.1	0.0047	16.9	0.1	1.8	1	0	0	1	1	1	1	Elongation	factor	P	(EF-P)	OB	domain
YcgR_2	PF12945.7	gi|429217321|ref|YP_007175311.1|	-	0.093	12.9	0.1	0.41	10.8	0.1	2.1	1	1	1	2	2	2	0	Flagellar	protein	YcgR
MMR_HSR1	PF01926.23	gi|429217322|ref|YP_007175312.1|	-	6e-12	45.7	0.0	1.8e-08	34.4	0.0	2.3	2	0	0	2	2	2	2	50S	ribosome-binding	GTPase
RsgA_GTPase	PF03193.16	gi|429217322|ref|YP_007175312.1|	-	2.7e-11	43.7	0.0	4.9e-11	42.8	0.0	1.4	1	0	0	1	1	1	1	RsgA	GTPase
GTP_EFTU	PF00009.27	gi|429217322|ref|YP_007175312.1|	-	0.00016	21.3	0.1	0.00031	20.3	0.1	1.7	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
FeoB_N	PF02421.18	gi|429217322|ref|YP_007175312.1|	-	0.00044	19.8	0.2	0.003	17.1	0.0	2.0	2	0	0	2	2	2	1	Ferrous	iron	transport	protein	B
AAA_16	PF13191.6	gi|429217322|ref|YP_007175312.1|	-	0.0031	17.9	0.0	0.0048	17.3	0.0	1.5	1	0	0	1	1	1	1	AAA	ATPase	domain
Dynamin_N	PF00350.23	gi|429217322|ref|YP_007175312.1|	-	0.0034	17.5	3.8	0.016	15.3	0.5	2.7	2	1	0	2	2	2	1	Dynamin	family
cobW	PF02492.19	gi|429217322|ref|YP_007175312.1|	-	0.0042	16.7	0.5	0.009	15.6	0.1	1.7	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
DUF5617	PF18493.1	gi|429217322|ref|YP_007175312.1|	-	0.019	15.1	0.4	4.4	7.5	0.1	2.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF5617)
TFIIB	PF00382.19	gi|429217323|ref|YP_007175313.1|	-	6.2e-36	122.3	1.8	7.4e-19	67.6	0.1	2.4	2	0	0	2	2	2	2	Transcription	factor	TFIIB	repeat
Sigma70_r4_2	PF08281.12	gi|429217323|ref|YP_007175313.1|	-	4.9e-05	22.9	0.6	0.44	10.3	0.0	3.2	3	0	0	3	3	3	2	Sigma-70,	region	4
Sigma70_r4	PF04545.16	gi|429217323|ref|YP_007175313.1|	-	0.00039	19.9	0.0	0.054	13.0	0.1	2.9	2	0	0	2	2	2	1	Sigma-70,	region	4
Cyclin_C	PF02984.19	gi|429217323|ref|YP_007175313.1|	-	0.00051	20.1	0.0	0.049	13.7	0.0	2.3	2	0	0	2	2	2	1	Cyclin,	C-terminal	domain
HTH_AsnC-type	PF13404.6	gi|429217323|ref|YP_007175313.1|	-	0.0059	16.4	0.2	0.032	14.1	0.1	2.3	3	0	0	3	3	3	1	AsnC-type	helix-turn-helix	domain
UPF0253	PF06786.12	gi|429217323|ref|YP_007175313.1|	-	0.0062	16.8	0.1	0.03	14.6	0.0	2.1	2	0	0	2	2	2	1	Uncharacterised	protein	family	(UPF0253)
HTH_Crp_2	PF13545.6	gi|429217323|ref|YP_007175313.1|	-	0.028	14.4	0.1	16	5.5	0.0	3.0	2	1	1	3	3	3	0	Crp-like	helix-turn-helix	domain
TF_Zn_Ribbon	PF08271.12	gi|429217323|ref|YP_007175313.1|	-	0.037	13.6	0.1	0.065	12.8	0.1	1.4	1	0	0	1	1	1	0	TFIIB	zinc-binding
TFIIB_C_1	PF18542.1	gi|429217323|ref|YP_007175313.1|	-	0.041	13.9	2.1	0.41	10.7	0.3	2.4	2	0	0	2	2	2	0	Transcription	factor	IIB	C-terminal	module	1
HTH_Tnp_ISL3	PF13542.6	gi|429217323|ref|YP_007175313.1|	-	0.048	13.1	0.1	0.41	10.1	0.1	2.3	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	transposase	family	ISL3
Transglut_core	PF01841.19	gi|429217323|ref|YP_007175313.1|	-	0.051	14.0	0.1	0.1	13.1	0.1	1.5	1	0	0	1	1	1	0	Transglutaminase-like	superfamily
DUF4777	PF16007.5	gi|429217323|ref|YP_007175313.1|	-	0.087	13.1	0.2	6.9	7.0	0.0	2.7	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4777)
DUF2802	PF10975.8	gi|429217323|ref|YP_007175313.1|	-	0.11	12.6	1.8	0.21	11.8	0.2	2.3	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2802)
AFOR_C	PF01314.18	gi|429217324|ref|YP_007175314.1|	-	1.8e-109	366.3	0.1	2.3e-109	365.9	0.1	1.1	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	domains	2	&	3
AFOR_N	PF02730.15	gi|429217324|ref|YP_007175314.1|	-	1e-73	247.5	0.0	1.5e-73	246.9	0.0	1.3	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
DUF2153	PF09921.9	gi|429217325|ref|YP_007175315.1|	-	1.2e-51	173.7	2.3	1.5e-51	173.4	2.3	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2153)
OSCP	PF00213.18	gi|429217325|ref|YP_007175315.1|	-	0.11	12.6	0.0	0.17	12.0	0.0	1.3	1	1	0	1	1	1	0	ATP	synthase	delta	(OSCP)	subunit
Ribosomal_S25	PF03297.15	gi|429217326|ref|YP_007175316.1|	-	1.7e-13	50.6	1.4	1.8e-13	50.5	1.4	1.0	1	0	0	1	1	1	1	S25	ribosomal	protein
HTH_DeoR	PF08220.12	gi|429217326|ref|YP_007175316.1|	-	0.0024	17.6	0.0	0.0038	16.9	0.0	1.3	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
Fe_dep_repress	PF01325.19	gi|429217326|ref|YP_007175316.1|	-	0.0038	17.4	0.1	0.0061	16.7	0.1	1.4	1	1	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_29	PF13551.6	gi|429217326|ref|YP_007175316.1|	-	0.0052	16.8	0.0	0.0069	16.4	0.0	1.2	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_Crp_2	PF13545.6	gi|429217326|ref|YP_007175316.1|	-	0.0073	16.3	0.0	0.024	14.6	0.0	1.7	1	1	1	2	2	2	1	Crp-like	helix-turn-helix	domain
HTH_24	PF13412.6	gi|429217326|ref|YP_007175316.1|	-	0.0073	15.8	0.1	0.015	14.8	0.1	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_36	PF13730.6	gi|429217326|ref|YP_007175316.1|	-	0.034	14.1	0.1	1.3	9.0	0.1	2.1	2	0	0	2	2	2	0	Helix-turn-helix	domain
EAP30	PF04157.16	gi|429217326|ref|YP_007175316.1|	-	0.039	13.2	0.0	0.049	12.9	0.0	1.1	1	0	0	1	1	1	0	EAP30/Vps36	family
MarR	PF01047.22	gi|429217326|ref|YP_007175316.1|	-	0.054	13.4	0.0	0.17	11.8	0.0	1.7	1	1	1	2	2	2	0	MarR	family
HTH_IclR	PF09339.10	gi|429217326|ref|YP_007175316.1|	-	0.055	13.3	0.0	0.078	12.8	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
Rrf2	PF02082.20	gi|429217326|ref|YP_007175316.1|	-	0.057	13.8	0.1	0.14	12.5	0.1	1.7	1	1	1	2	2	2	0	Transcriptional	regulator
GntR	PF00392.21	gi|429217326|ref|YP_007175316.1|	-	0.086	12.5	0.1	0.12	12.0	0.1	1.4	1	1	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
DAO	PF01266.24	gi|429217327|ref|YP_007175317.1|	-	1.2e-39	136.9	0.0	1.4e-39	136.7	0.0	1.0	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.6	gi|429217327|ref|YP_007175317.1|	-	7.4e-06	26.1	0.1	1.8e-05	24.8	0.1	1.8	1	1	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.17	gi|429217327|ref|YP_007175317.1|	-	0.012	14.9	0.0	0.021	14.1	0.0	1.4	1	0	0	1	1	1	0	Thi4	family
FAD_binding_2	PF00890.24	gi|429217327|ref|YP_007175317.1|	-	0.013	14.6	0.0	0.042	12.9	0.0	1.7	2	0	0	2	2	2	0	FAD	binding	domain
Pyr_redox_2	PF07992.14	gi|429217327|ref|YP_007175317.1|	-	0.015	14.5	0.0	2.7	7.1	0.0	2.3	1	1	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_9	PF13454.6	gi|429217327|ref|YP_007175317.1|	-	0.02	14.9	0.0	0.031	14.3	0.0	1.3	1	0	0	1	1	1	0	FAD-NAD(P)-binding
NPCBM	PF08305.11	gi|429217327|ref|YP_007175317.1|	-	0.026	14.7	0.0	0.069	13.3	0.0	1.7	1	0	0	1	1	1	0	NPCBM/NEW2	domain
Xpo1	PF08389.12	gi|429217328|ref|YP_007175318.1|	-	0.09	12.8	0.9	12	5.9	0.1	3.5	4	1	0	4	4	4	0	Exportin	1-like	protein
Aldolase	PF01081.19	gi|429217328|ref|YP_007175318.1|	-	0.14	11.5	0.0	0.31	10.4	0.0	1.6	1	0	0	1	1	1	0	KDPG	and	KHG	aldolase
SurE	PF01975.17	gi|429217329|ref|YP_007175319.1|	-	5.5e-51	173.1	0.0	7.2e-51	172.7	0.0	1.1	1	0	0	1	1	1	1	Survival	protein	SurE
Glyco_trans_4_2	PF13477.6	gi|429217329|ref|YP_007175319.1|	-	0.00058	19.9	0.1	0.0051	16.8	0.0	2.2	2	0	0	2	2	2	1	Glycosyl	transferase	4-like
Glyco_transf_4	PF13439.6	gi|429217329|ref|YP_007175319.1|	-	0.0075	16.3	0.0	0.17	11.8	0.0	2.1	2	0	0	2	2	2	1	Glycosyltransferase	Family	4
Rx_N	PF18052.1	gi|429217330|ref|YP_007175320.1|	-	0.013	15.7	0.1	0.017	15.4	0.1	1.3	1	1	0	1	1	1	0	Rx	N-terminal	domain
bact-PGI_C	PF10432.9	gi|429217331|ref|YP_007175321.1|	-	2.7e-38	131.4	0.0	6.5e-38	130.2	0.0	1.6	2	0	0	2	2	2	1	Bacterial	phospho-glucose	isomerase	C-terminal	SIS	domain
SIS	PF01380.22	gi|429217331|ref|YP_007175321.1|	-	4.6e-09	36.2	0.1	2.9e-08	33.6	0.1	2.2	1	1	1	2	2	2	1	SIS	domain
SIS_2	PF13580.6	gi|429217331|ref|YP_007175321.1|	-	0.0028	17.7	0.0	0.01	15.9	0.0	1.9	2	0	0	2	2	2	1	SIS	domain
SICA_beta	PF12878.7	gi|429217331|ref|YP_007175321.1|	-	0.19	11.9	0.0	0.32	11.2	0.0	1.4	1	0	0	1	1	1	0	SICA	extracellular	beta	domain
HD	PF01966.22	gi|429217332|ref|YP_007175322.1|	-	7.1e-09	35.9	3.6	8.4e-09	35.7	0.3	2.8	3	1	0	3	3	3	1	HD	domain
HDOD	PF08668.12	gi|429217332|ref|YP_007175322.1|	-	0.00049	19.6	0.0	0.0033	16.9	0.1	2.1	2	0	0	2	2	2	1	HDOD	domain
HEM4	PF02602.15	gi|429217333|ref|YP_007175323.1|	-	3.1e-30	105.2	0.0	3.8e-30	105.0	0.0	1.0	1	0	0	1	1	1	1	Uroporphyrinogen-III	synthase	HemD
YueH	PF14166.6	gi|429217333|ref|YP_007175323.1|	-	0.033	14.0	0.4	0.08	12.8	0.2	1.7	2	0	0	2	2	2	0	YueH-like	protein
AAA_14	PF13173.6	gi|429217333|ref|YP_007175323.1|	-	0.046	13.8	0.2	0.11	12.6	0.2	1.7	1	0	0	1	1	1	0	AAA	domain
TP_methylase	PF00590.20	gi|429217334|ref|YP_007175324.1|	-	1.4e-50	172.2	0.0	1.6e-50	172.0	0.0	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
Phage_sheath_1C	PF17482.2	gi|429217334|ref|YP_007175324.1|	-	0.019	14.9	0.1	0.038	14.0	0.1	1.5	1	0	0	1	1	1	0	Phage	tail	sheath	C-terminal	domain
Porphobil_deam	PF01379.20	gi|429217335|ref|YP_007175325.1|	-	1.6e-61	207.4	0.0	2e-61	207.1	0.0	1.1	1	0	0	1	1	1	1	Porphobilinogen	deaminase,	dipyromethane	cofactor	binding	domain
Porphobil_deamC	PF03900.15	gi|429217335|ref|YP_007175325.1|	-	1.1e-10	41.7	0.0	2.7e-10	40.5	0.0	1.7	1	0	0	1	1	1	1	Porphobilinogen	deaminase,	C-terminal	domain
GSH-S_ATP	PF02955.16	gi|429217335|ref|YP_007175325.1|	-	0.0097	15.3	0.7	0.6	9.5	0.0	2.6	3	0	0	3	3	3	2	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
Aminotran_3	PF00202.21	gi|429217336|ref|YP_007175326.1|	-	6.4e-68	229.3	0.0	7.4e-68	229.1	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
Aminotran_1_2	PF00155.21	gi|429217336|ref|YP_007175326.1|	-	5.5e-05	22.5	0.0	7.8e-05	22.0	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
RNA_pol_Rpb1_3	PF04983.18	gi|429217336|ref|YP_007175326.1|	-	0.049	13.6	0.2	0.54	10.2	0.2	2.5	2	1	0	2	2	2	0	RNA	polymerase	Rpb1,	domain	3
PBP_like	PF12727.7	gi|429217338|ref|YP_007175328.1|	-	3.3e-53	179.7	0.0	5.7e-53	178.9	0.0	1.4	1	0	0	1	1	1	1	PBP	superfamily	domain
MoeA_N	PF03453.17	gi|429217338|ref|YP_007175328.1|	-	2.6e-41	141.0	0.5	5.4e-41	140.0	0.5	1.6	1	0	0	1	1	1	1	MoeA	N-terminal	region	(domain	I	and	II)
MoCF_biosynth	PF00994.24	gi|429217338|ref|YP_007175328.1|	-	6.7e-25	87.4	0.0	1.6e-24	86.2	0.0	1.6	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
MoeA_C	PF03454.15	gi|429217338|ref|YP_007175328.1|	-	5.5e-11	42.5	0.0	1.2e-10	41.4	0.0	1.6	1	0	0	1	1	1	1	MoeA	C-terminal	region	(domain	IV)
Phosphonate-bd	PF12974.7	gi|429217338|ref|YP_007175328.1|	-	6.8e-05	22.6	0.0	0.00018	21.2	0.0	1.7	1	0	0	1	1	1	1	ABC	transporter,	phosphonate,	periplasmic	substrate-binding	protein
SBP_bac_11	PF13531.6	gi|429217338|ref|YP_007175328.1|	-	0.00064	19.5	0.0	0.0016	18.2	0.0	1.7	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
OpuAC	PF04069.12	gi|429217338|ref|YP_007175328.1|	-	0.001	18.7	0.0	0.0063	16.1	0.0	2.1	2	0	0	2	2	2	1	Substrate	binding	domain	of	ABC-type	glycine	betaine	transport	system
Lipoprotein_9	PF03180.14	gi|429217338|ref|YP_007175328.1|	-	0.13	11.4	2.6	3	6.9	0.2	3.0	3	0	0	3	3	3	0	NLPA	lipoprotein
PBP_like_2	PF12849.7	gi|429217338|ref|YP_007175328.1|	-	0.15	11.7	0.0	1.7	8.2	0.0	2.4	2	1	0	2	2	2	0	PBP	superfamily	domain
RNA_pol_L_2	PF13656.6	gi|429217339|ref|YP_007175329.1|	-	1.2e-19	69.9	0.3	2e-19	69.1	0.3	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
RNA_pol_L	PF01193.24	gi|429217339|ref|YP_007175329.1|	-	7.9e-07	28.4	0.0	1.2e-06	27.8	0.0	1.3	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
rhaM	PF05336.13	gi|429217339|ref|YP_007175329.1|	-	0.031	14.3	0.0	0.041	14.0	0.0	1.2	1	0	0	1	1	1	0	L-rhamnose	mutarotase
CagS	PF16707.5	gi|429217339|ref|YP_007175329.1|	-	0.048	13.7	3.4	0.07	13.1	3.4	1.2	1	0	0	1	1	1	0	Cag	pathogenicity	island	protein	S	of	Helicobacter	pylori
DUF2067	PF09840.9	gi|429217340|ref|YP_007175330.1|	-	1.5e-48	164.9	5.5	1.6e-48	164.7	5.5	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2067)
Ndc80_HEC	PF03801.13	gi|429217340|ref|YP_007175330.1|	-	0.008	15.8	0.5	0.14	11.8	0.2	2.2	1	1	1	2	2	2	2	HEC/Ndc80p	family
CtsR	PF05848.11	gi|429217340|ref|YP_007175330.1|	-	0.067	13.1	1.0	0.21	11.5	0.2	2.3	2	1	1	3	3	3	0	CtsR	N-terminal	HTH	domain
ECR1_N	PF14382.6	gi|429217341|ref|YP_007175331.1|	-	6.1e-07	29.1	0.2	3.2e-06	26.8	0.1	2.1	2	0	0	2	2	2	1	Exosome	complex	exonuclease	RRP4	N-terminal	region
A2L_zn_ribbon	PF08792.10	gi|429217341|ref|YP_007175331.1|	-	0.0003	20.4	3.5	0.00076	19.1	3.5	1.6	1	0	0	1	1	1	1	A2L	zinc	ribbon	domain
Zn_Tnp_IS91	PF14319.6	gi|429217341|ref|YP_007175331.1|	-	0.00031	20.7	0.0	0.00048	20.1	0.0	1.2	1	0	0	1	1	1	1	Transposase	zinc-binding	domain
OrfB_Zn_ribbon	PF07282.11	gi|429217341|ref|YP_007175331.1|	-	0.0014	18.5	0.6	0.0025	17.7	0.6	1.3	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
EXOSC1	PF10447.9	gi|429217341|ref|YP_007175331.1|	-	0.0014	19.2	0.3	0.7	10.5	0.1	2.5	2	0	0	2	2	2	1	Exosome	component	EXOSC1/CSL4
RNA_POL_M_15KD	PF02150.16	gi|429217341|ref|YP_007175331.1|	-	0.012	15.4	3.8	0.04	13.8	3.8	1.8	1	1	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
HypA	PF01155.19	gi|429217341|ref|YP_007175331.1|	-	0.02	14.9	0.2	0.036	14.1	0.2	1.4	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Zn-ribbon_8	PF09723.10	gi|429217341|ref|YP_007175331.1|	-	0.026	14.7	0.5	0.045	13.9	0.5	1.3	1	0	0	1	1	1	0	Zinc	ribbon	domain
TerY_C	PF15616.6	gi|429217341|ref|YP_007175331.1|	-	0.033	14.3	0.2	0.055	13.6	0.2	1.3	1	0	0	1	1	1	0	TerY-C	metal	binding	domain
DZR	PF12773.7	gi|429217341|ref|YP_007175331.1|	-	0.037	14.0	0.4	0.061	13.3	0.4	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
DUF2318	PF10080.9	gi|429217341|ref|YP_007175331.1|	-	0.039	14.1	0.3	0.072	13.2	0.3	1.4	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2318)
NOB1_Zn_bind	PF08772.11	gi|429217341|ref|YP_007175331.1|	-	0.047	13.9	0.1	0.092	12.9	0.1	1.6	1	0	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
zf-C2HC5	PF06221.13	gi|429217341|ref|YP_007175331.1|	-	0.076	13.0	1.3	0.13	12.3	1.3	1.3	1	0	0	1	1	1	0	Putative	zinc	finger	motif,	C2HC5-type
HscB_4_cys	PF18256.1	gi|429217341|ref|YP_007175331.1|	-	0.091	12.6	0.6	0.15	11.9	0.6	1.3	1	0	0	1	1	1	0	Co-chaperone	HscB	tetracysteine	metal	binding	motif
zinc_ribbon_4	PF13717.6	gi|429217341|ref|YP_007175331.1|	-	0.1	12.5	3.1	2.6	8.0	3.1	2.3	1	1	0	1	1	1	0	zinc-ribbon	domain
DNA_RNApol_7kD	PF03604.13	gi|429217341|ref|YP_007175331.1|	-	0.11	12.1	2.4	0.26	11.0	2.4	1.5	1	0	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Anti-TRAP	PF15777.5	gi|429217341|ref|YP_007175331.1|	-	0.12	12.3	0.2	0.21	11.6	0.2	1.4	1	0	0	1	1	1	0	Tryptophan	RNA-binding	attenuator	protein	inhibitory	protein
zf-ribbon_3	PF13248.6	gi|429217341|ref|YP_007175331.1|	-	0.15	11.6	5.1	1.7	8.1	5.1	2.3	1	1	1	2	2	2	0	zinc-ribbon	domain
Rpr2	PF04032.16	gi|429217341|ref|YP_007175331.1|	-	0.2	11.9	2.1	0.43	10.9	2.1	1.6	1	1	0	1	1	1	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
zinc_ribbon_2	PF13240.6	gi|429217341|ref|YP_007175331.1|	-	0.53	10.1	6.1	3.4	7.5	6.1	2.1	1	1	0	1	1	1	0	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|429217341|ref|YP_007175331.1|	-	1.3	8.6	4.4	62	3.2	0.2	2.2	1	1	0	1	1	1	0	TFIIB	zinc-binding
Prok-RING_1	PF14446.6	gi|429217341|ref|YP_007175331.1|	-	1.8	8.5	4.2	0.36	10.8	0.6	1.6	2	0	0	2	2	1	0	Prokaryotic	RING	finger	family	1
zf-ACC	PF17848.1	gi|429217341|ref|YP_007175331.1|	-	5.2	7.2	6.6	5.1	7.3	0.8	2.4	2	0	0	2	2	2	0	Acetyl-coA	carboxylase	zinc	finger	domain
Cons_hypoth95	PF03602.15	gi|429217342|ref|YP_007175332.1|	-	1.6e-05	24.6	0.0	2e-05	24.3	0.0	1.1	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
MTS	PF05175.14	gi|429217342|ref|YP_007175332.1|	-	7.3e-05	22.4	0.0	0.00011	21.7	0.0	1.3	1	1	0	1	1	1	1	Methyltransferase	small	domain
PrmA	PF06325.13	gi|429217342|ref|YP_007175332.1|	-	0.0019	17.6	0.0	0.0022	17.5	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
DOT1	PF08123.13	gi|429217342|ref|YP_007175332.1|	-	0.016	14.8	0.0	0.023	14.3	0.0	1.3	1	0	0	1	1	1	0	Histone	methylation	protein	DOT1
Methyltransf_15	PF09445.10	gi|429217342|ref|YP_007175332.1|	-	0.068	12.7	0.0	0.1	12.2	0.0	1.2	1	0	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
Methyltransf_25	PF13649.6	gi|429217342|ref|YP_007175332.1|	-	0.073	13.8	0.0	0.13	13.0	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
MetW	PF07021.12	gi|429217342|ref|YP_007175332.1|	-	0.078	12.6	0.1	0.14	11.8	0.1	1.6	1	1	0	1	1	1	0	Methionine	biosynthesis	protein	MetW
N6-adenineMlase	PF10237.9	gi|429217342|ref|YP_007175332.1|	-	0.14	12.0	0.0	0.2	11.5	0.0	1.4	1	1	0	1	1	1	0	Probable	N6-adenine	methyltransferase
Diphthamide_syn	PF01866.17	gi|429217343|ref|YP_007175333.1|	-	1.3e-64	218.6	0.0	1.6e-64	218.3	0.0	1.0	1	0	0	1	1	1	1	Putative	diphthamide	synthesis	protein
DUF2745	PF10922.8	gi|429217343|ref|YP_007175333.1|	-	0.14	12.5	0.0	0.35	11.2	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2745)
Ribosomal_L16	PF00252.18	gi|429217344|ref|YP_007175334.1|	-	4.9e-34	117.2	0.1	5.6e-34	117.0	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L16p/L10e
Acyl-CoA_dh_1	PF00441.24	gi|429217345|ref|YP_007175335.1|	-	1.7e-29	102.9	0.1	2.4e-29	102.5	0.1	1.2	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_M	PF02770.19	gi|429217345|ref|YP_007175335.1|	-	1.7e-10	41.0	0.0	2.6e-10	40.4	0.0	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.11	gi|429217345|ref|YP_007175335.1|	-	5.3e-09	36.5	0.0	9.7e-09	35.6	0.0	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.16	gi|429217345|ref|YP_007175335.1|	-	0.0067	17.1	0.0	0.016	15.8	0.0	1.7	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
MarR_2	PF12802.7	gi|429217346|ref|YP_007175336.1|	-	6e-05	22.8	0.1	9.2e-05	22.3	0.1	1.2	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.19	gi|429217346|ref|YP_007175336.1|	-	7.4e-05	22.6	0.3	0.00011	22.0	0.3	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
TFIIE_alpha	PF02002.17	gi|429217346|ref|YP_007175336.1|	-	0.00021	21.1	0.4	0.00026	20.8	0.4	1.3	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HTH_5	PF01022.20	gi|429217346|ref|YP_007175336.1|	-	0.00094	19.0	0.1	0.0017	18.2	0.1	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.6	gi|429217346|ref|YP_007175336.1|	-	0.0023	17.5	0.0	0.0053	16.3	0.0	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
FtsK_gamma	PF09397.10	gi|429217346|ref|YP_007175336.1|	-	0.0088	15.8	0.0	0.013	15.3	0.0	1.3	1	0	0	1	1	1	1	Ftsk	gamma	domain
HTH_DeoR	PF08220.12	gi|429217346|ref|YP_007175336.1|	-	0.023	14.4	0.2	0.05	13.3	0.0	1.7	2	0	0	2	2	2	0	DeoR-like	helix-turn-helix	domain
HTH_IclR	PF09339.10	gi|429217346|ref|YP_007175336.1|	-	0.024	14.4	0.1	0.059	13.2	0.0	1.6	2	0	0	2	2	2	0	IclR	helix-turn-helix	domain
Rrf2	PF02082.20	gi|429217346|ref|YP_007175336.1|	-	0.036	14.4	0.0	0.049	14.0	0.0	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_11	PF08279.12	gi|429217346|ref|YP_007175336.1|	-	0.043	13.8	0.0	0.076	13.0	0.0	1.4	1	0	0	1	1	1	0	HTH	domain
HTH_9	PF08221.11	gi|429217346|ref|YP_007175336.1|	-	0.052	13.7	0.1	0.093	12.8	0.1	1.4	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
Mga	PF05043.13	gi|429217346|ref|YP_007175336.1|	-	0.064	13.8	0.0	0.12	13.0	0.0	1.6	2	0	0	2	2	2	0	Mga	helix-turn-helix	domain
MarR	PF01047.22	gi|429217346|ref|YP_007175336.1|	-	0.069	13.1	0.0	0.11	12.5	0.0	1.3	1	0	0	1	1	1	0	MarR	family
DUF2551	PF10826.8	gi|429217346|ref|YP_007175336.1|	-	0.095	12.9	0.0	0.15	12.3	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2551)
F-112	PF09645.10	gi|429217346|ref|YP_007175336.1|	-	0.14	12.3	0.0	0.18	11.9	0.0	1.3	1	1	0	1	1	1	0	F-112	protein
TIM	PF00121.18	gi|429217347|ref|YP_007175337.1|	-	2.8e-10	40.0	0.3	9.1e-10	38.3	0.1	1.7	1	1	1	2	2	2	1	Triosephosphate	isomerase
ThiG	PF05690.14	gi|429217347|ref|YP_007175337.1|	-	5.5e-09	35.7	0.7	8.5e-09	35.1	0.7	1.3	1	0	0	1	1	1	1	Thiazole	biosynthesis	protein	ThiG
Trp_syntA	PF00290.20	gi|429217347|ref|YP_007175337.1|	-	2.5e-07	29.8	0.7	5e-05	22.3	0.4	2.2	2	0	0	2	2	2	2	Tryptophan	synthase	alpha	chain
His_biosynth	PF00977.21	gi|429217347|ref|YP_007175337.1|	-	0.00096	18.7	1.0	0.0025	17.3	0.1	2.1	3	0	0	3	3	3	1	Histidine	biosynthesis	protein
NanE	PF04131.14	gi|429217347|ref|YP_007175337.1|	-	0.0036	16.5	0.1	0.0065	15.7	0.1	1.4	1	1	0	1	1	1	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
DUF561	PF04481.12	gi|429217347|ref|YP_007175337.1|	-	0.0062	15.7	0.9	0.0062	15.7	0.9	2.4	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF561)
NMO	PF03060.15	gi|429217347|ref|YP_007175337.1|	-	0.011	15.2	0.1	0.019	14.4	0.1	1.3	1	0	0	1	1	1	0	Nitronate	monooxygenase
IMPDH	PF00478.25	gi|429217347|ref|YP_007175337.1|	-	0.019	14.0	0.2	0.028	13.4	0.2	1.2	1	0	0	1	1	1	0	IMP	dehydrogenase	/	GMP	reductase	domain
FMN_dh	PF01070.18	gi|429217347|ref|YP_007175337.1|	-	0.022	13.8	0.1	0.035	13.2	0.1	1.2	1	0	0	1	1	1	0	FMN-dependent	dehydrogenase
IGPS	PF00218.21	gi|429217347|ref|YP_007175337.1|	-	0.036	13.2	0.0	0.045	12.9	0.0	1.3	1	0	0	1	1	1	0	Indole-3-glycerol	phosphate	synthase
Glu_synthase	PF01645.17	gi|429217347|ref|YP_007175337.1|	-	0.097	11.8	0.9	0.12	11.5	0.1	1.5	2	0	0	2	2	2	0	Conserved	region	in	glutamate	synthase
FBPase_3	PF01950.16	gi|429217348|ref|YP_007175338.1|	-	3.8e-186	618.5	0.0	4.3e-186	618.3	0.0	1.0	1	0	0	1	1	1	1	Fructose-1,6-bisphosphatase
CarS-like	PF01864.17	gi|429217349|ref|YP_007175339.1|	-	6e-43	146.8	7.9	2.4e-42	144.9	7.9	1.7	1	1	0	1	1	1	1	CDP-archaeol	synthase
CTP_transf_1	PF01148.20	gi|429217349|ref|YP_007175339.1|	-	1.2e-05	25.2	3.8	1.2e-05	25.2	3.8	1.7	1	1	0	1	1	1	1	Cytidylyltransferase	family
RseC_MucC	PF04246.12	gi|429217349|ref|YP_007175339.1|	-	9.5	6.2	5.4	13	5.8	0.4	2.2	1	1	1	2	2	2	0	Positive	regulator	of	sigma(E),	RseC/MucC
AAA	PF00004.29	gi|429217350|ref|YP_007175340.1|	-	1.1e-08	35.6	0.0	1.4e-08	35.2	0.0	1.1	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_24	PF13479.6	gi|429217350|ref|YP_007175340.1|	-	2.5e-06	27.4	0.1	2.7e-06	27.3	0.1	1.1	1	0	0	1	1	1	1	AAA	domain
KTI12	PF08433.10	gi|429217350|ref|YP_007175340.1|	-	3.4e-06	26.7	0.0	4.5e-06	26.3	0.0	1.1	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
AAA_16	PF13191.6	gi|429217350|ref|YP_007175340.1|	-	3.4e-06	27.5	0.0	4e-06	27.3	0.0	1.2	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_14	PF13173.6	gi|429217350|ref|YP_007175340.1|	-	4.1e-05	23.6	0.3	5.8e-05	23.1	0.3	1.2	1	0	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.17	gi|429217350|ref|YP_007175340.1|	-	4.5e-05	23.2	0.0	0.00013	21.7	0.0	1.8	1	1	0	1	1	1	1	IstB-like	ATP	binding	protein
ATPase_2	PF01637.18	gi|429217350|ref|YP_007175340.1|	-	0.00042	20.3	0.7	0.00072	19.5	0.7	1.4	1	1	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
AAA_22	PF13401.6	gi|429217350|ref|YP_007175340.1|	-	0.0016	18.8	0.0	0.003	17.8	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_25	PF13481.6	gi|429217350|ref|YP_007175340.1|	-	0.002	17.8	0.0	0.37	10.3	0.0	2.1	1	1	1	2	2	2	1	AAA	domain
RNA_helicase	PF00910.22	gi|429217350|ref|YP_007175340.1|	-	0.0086	16.5	0.2	0.022	15.1	0.2	1.8	1	1	0	1	1	1	1	RNA	helicase
ATPase	PF06745.13	gi|429217350|ref|YP_007175340.1|	-	0.0091	15.4	0.3	0.47	9.8	0.2	2.1	1	1	1	2	2	2	1	KaiC
Bac_DnaA	PF00308.18	gi|429217350|ref|YP_007175340.1|	-	0.012	15.5	0.6	0.02	14.7	0.6	1.4	1	1	0	1	1	1	0	Bacterial	dnaA	protein
AAA_18	PF13238.6	gi|429217350|ref|YP_007175340.1|	-	0.013	16.0	0.0	0.018	15.6	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_2	PF07724.14	gi|429217350|ref|YP_007175340.1|	-	0.015	15.4	0.0	0.023	14.8	0.0	1.2	1	0	0	1	1	1	0	AAA	domain	(Cdc48	subfamily)
DUF2533	PF10752.9	gi|429217350|ref|YP_007175340.1|	-	0.023	15.1	0.1	0.044	14.2	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2533)
PhoH	PF02562.16	gi|429217350|ref|YP_007175340.1|	-	0.026	14.0	0.1	0.072	12.5	0.0	1.7	2	0	0	2	2	2	0	PhoH-like	protein
TIP49	PF06068.13	gi|429217350|ref|YP_007175340.1|	-	0.03	13.5	0.0	0.037	13.2	0.0	1.2	1	0	0	1	1	1	0	TIP49	P-loop	domain
AAA_7	PF12775.7	gi|429217350|ref|YP_007175340.1|	-	0.032	13.8	0.0	0.038	13.5	0.0	1.3	1	1	0	1	1	1	0	P-loop	containing	dynein	motor	region
AAA_11	PF13086.6	gi|429217350|ref|YP_007175340.1|	-	0.093	12.5	0.0	0.12	12.1	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
Ribosomal_L27A	PF00828.19	gi|429217351|ref|YP_007175341.1|	-	5.8e-16	59.3	1.2	8.2e-16	58.8	1.2	1.2	1	0	0	1	1	1	1	Ribosomal	proteins	50S-L15,	50S-L18e,	60S-L27A
Ribosomal_L30	PF00327.20	gi|429217352|ref|YP_007175342.1|	-	6.7e-09	35.5	0.0	1.4e-08	34.4	0.0	1.6	1	0	0	1	1	1	1	Ribosomal	protein	L30p/L7e
Ribosomal_S5_C	PF03719.15	gi|429217353|ref|YP_007175343.1|	-	7.6e-24	83.0	0.1	1.2e-23	82.4	0.1	1.3	1	0	0	1	1	1	1	Ribosomal	protein	S5,	C-terminal	domain
Ribosomal_S5	PF00333.20	gi|429217353|ref|YP_007175343.1|	-	2.9e-23	81.6	2.5	5.4e-23	80.7	1.1	2.1	2	0	0	2	2	2	1	Ribosomal	protein	S5,	N-terminal	domain
Ribosomal_L5e	PF17144.4	gi|429217354|ref|YP_007175344.1|	-	4.7e-31	108.0	5.6	2.4e-18	66.6	4.1	2.2	1	1	1	2	2	2	2	Ribosomal	large	subunit	proteins	60S	L5,	and	50S	L18
Ribosomal_L18p	PF00861.22	gi|429217354|ref|YP_007175344.1|	-	1.7e-08	34.8	0.3	2.5e-08	34.3	0.1	1.4	2	0	0	2	2	2	1	Ribosomal	L18	of	archaea,	bacteria,	mitoch.	and	chloroplast
Ribosomal_L18_c	PF14204.6	gi|429217354|ref|YP_007175344.1|	-	2.3e-05	25.2	0.0	4.9e-05	24.2	0.0	1.5	1	0	0	1	1	1	1	Ribosomal	L18	C-terminal	region
Ribosomal_L19e	PF01280.20	gi|429217355|ref|YP_007175345.1|	-	1.3e-50	171.2	7.1	1.5e-50	171.0	7.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L19e
HTH_17	PF12728.7	gi|429217355|ref|YP_007175345.1|	-	0.064	13.5	3.5	5.8	7.2	1.0	3.7	3	1	1	4	4	4	0	Helix-turn-helix	domain
DUF664	PF04978.12	gi|429217355|ref|YP_007175345.1|	-	0.12	12.8	0.0	0.16	12.4	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF664)
Ribosomal_L32e	PF01655.18	gi|429217356|ref|YP_007175346.1|	-	4.5e-34	117.1	0.2	7.6e-34	116.4	0.1	1.4	1	1	0	1	1	1	1	Ribosomal	protein	L32
Hus1	PF04005.12	gi|429217356|ref|YP_007175346.1|	-	0.15	11.2	0.0	0.16	11.0	0.0	1.1	1	0	0	1	1	1	0	Hus1-like	protein
Ribosomal_L6	PF00347.23	gi|429217357|ref|YP_007175347.1|	-	7.2e-28	97.1	6.3	2e-15	57.2	1.2	2.1	2	0	0	2	2	2	2	Ribosomal	protein	L6
DUF5622	PF18533.1	gi|429217358|ref|YP_007175348.1|	-	5.6e-10	39.2	3.6	6.1e-10	39.1	3.6	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF5622)
CYTH	PF01928.21	gi|429217359|ref|YP_007175349.1|	-	2.2e-26	92.9	0.4	2.6e-26	92.6	0.4	1.0	1	0	0	1	1	1	1	CYTH	domain
Mustang	PF15682.5	gi|429217359|ref|YP_007175349.1|	-	0.099	12.7	0.0	0.29	11.2	0.0	1.8	1	0	0	1	1	1	0	Musculoskeletal,	temporally	activated-embryonic	nuclear	protein	1
AAA	PF00004.29	gi|429217360|ref|YP_007175350.1|	-	5.7e-101	334.2	0.0	3.2e-50	170.0	0.0	2.4	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_lid_3	PF17862.1	gi|429217360|ref|YP_007175350.1|	-	6.4e-33	112.3	0.7	3e-15	55.7	0.1	2.7	2	0	0	2	2	2	2	AAA+	lid	domain
CDC48_N	PF02359.18	gi|429217360|ref|YP_007175350.1|	-	4.4e-25	87.7	0.5	1.9e-24	85.7	0.3	2.3	2	0	0	2	2	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
AAA_2	PF07724.14	gi|429217360|ref|YP_007175350.1|	-	2.1e-16	60.5	0.0	1.9e-08	34.6	0.0	2.5	2	0	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
RuvB_N	PF05496.12	gi|429217360|ref|YP_007175350.1|	-	2.1e-16	60.1	0.0	1.4e-08	34.6	0.0	2.6	2	1	0	2	2	2	2	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_16	PF13191.6	gi|429217360|ref|YP_007175350.1|	-	4.1e-13	50.1	0.0	6.3e-06	26.7	0.0	3.4	2	1	1	3	3	3	2	AAA	ATPase	domain
AAA_5	PF07728.14	gi|429217360|ref|YP_007175350.1|	-	7.4e-13	48.7	0.7	1.8e-06	28.0	0.1	3.7	2	2	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
AAA_33	PF13671.6	gi|429217360|ref|YP_007175350.1|	-	1.5e-11	44.7	0.0	3.9e-05	23.8	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
TIP49	PF06068.13	gi|429217360|ref|YP_007175350.1|	-	7.3e-11	41.9	2.7	7.7e-05	22.0	0.0	3.3	4	0	0	4	4	2	2	TIP49	P-loop	domain
AAA_22	PF13401.6	gi|429217360|ref|YP_007175350.1|	-	7.7e-11	42.4	1.0	0.0031	17.8	0.1	3.8	2	2	1	3	3	3	2	AAA	domain
CDC48_2	PF02933.17	gi|429217360|ref|YP_007175350.1|	-	1.8e-10	40.4	1.5	6.4e-10	38.7	1.5	2.0	1	0	0	1	1	1	1	Cell	division	protein	48	(CDC48),	domain	2
AAA_14	PF13173.6	gi|429217360|ref|YP_007175350.1|	-	6.2e-10	39.2	0.0	0.00023	21.2	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_18	PF13238.6	gi|429217360|ref|YP_007175350.1|	-	9.8e-09	35.9	0.0	0.00097	19.7	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
IstB_IS21	PF01695.17	gi|429217360|ref|YP_007175350.1|	-	2.1e-08	34.1	0.0	0.0091	15.7	0.0	2.4	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
AAA_28	PF13521.6	gi|429217360|ref|YP_007175350.1|	-	3.2e-08	34.0	0.1	0.0024	18.1	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
RNA_helicase	PF00910.22	gi|429217360|ref|YP_007175350.1|	-	8.9e-08	32.5	0.0	0.0027	18.1	0.0	2.7	2	0	0	2	2	2	2	RNA	helicase
Mg_chelatase	PF01078.21	gi|429217360|ref|YP_007175350.1|	-	1.9e-07	30.7	1.7	0.015	14.7	0.1	3.2	4	0	0	4	4	3	2	Magnesium	chelatase,	subunit	ChlI
AAA_24	PF13479.6	gi|429217360|ref|YP_007175350.1|	-	5.9e-07	29.4	0.0	0.0079	15.9	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
Vps4_C	PF09336.10	gi|429217360|ref|YP_007175350.1|	-	6.3e-07	29.3	2.1	0.013	15.5	0.1	3.3	3	0	0	3	3	3	2	Vps4	C	terminal	oligomerisation	domain
Bac_DnaA	PF00308.18	gi|429217360|ref|YP_007175350.1|	-	1.3e-06	28.4	0.0	8.4e-05	22.5	0.0	2.5	2	0	0	2	2	2	1	Bacterial	dnaA	protein
AAA_3	PF07726.11	gi|429217360|ref|YP_007175350.1|	-	4.8e-06	26.5	0.0	0.06	13.2	0.0	2.6	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
ABC_tran	PF00005.27	gi|429217360|ref|YP_007175350.1|	-	5.2e-06	27.0	0.0	0.1	13.1	0.0	2.7	2	0	0	2	2	2	2	ABC	transporter
TsaE	PF02367.17	gi|429217360|ref|YP_007175350.1|	-	5.5e-06	26.4	0.0	0.065	13.2	0.0	2.8	2	1	0	2	2	2	2	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
ATPase	PF06745.13	gi|429217360|ref|YP_007175350.1|	-	1.1e-05	24.9	0.8	0.45	9.8	0.0	3.9	5	0	0	5	5	4	2	KaiC
AAA_7	PF12775.7	gi|429217360|ref|YP_007175350.1|	-	2.1e-05	24.1	0.0	0.21	11.1	0.0	2.7	2	1	0	2	2	2	2	P-loop	containing	dynein	motor	region
AAA_25	PF13481.6	gi|429217360|ref|YP_007175350.1|	-	2.2e-05	24.1	7.4	0.5	9.9	0.6	4.3	2	2	1	3	3	3	2	AAA	domain
Zeta_toxin	PF06414.12	gi|429217360|ref|YP_007175350.1|	-	2.5e-05	23.7	0.2	0.15	11.4	0.0	2.7	2	0	0	2	2	2	2	Zeta	toxin
DUF815	PF05673.13	gi|429217360|ref|YP_007175350.1|	-	2.7e-05	23.5	0.0	0.25	10.5	0.0	2.6	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
NACHT	PF05729.12	gi|429217360|ref|YP_007175350.1|	-	4.8e-05	23.3	1.7	0.7	9.8	0.1	3.8	4	0	0	4	4	4	1	NACHT	domain
Sigma54_activat	PF00158.26	gi|429217360|ref|YP_007175350.1|	-	5.4e-05	23.0	0.1	0.77	9.4	0.0	3.3	2	1	0	2	2	2	2	Sigma-54	interaction	domain
Parvo_NS1	PF01057.17	gi|429217360|ref|YP_007175350.1|	-	5.7e-05	22.3	0.4	0.05	12.7	0.1	2.2	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
PhoH	PF02562.16	gi|429217360|ref|YP_007175350.1|	-	0.00012	21.6	1.2	0.27	10.6	0.1	2.5	2	0	0	2	2	2	2	PhoH-like	protein
DUF2075	PF09848.9	gi|429217360|ref|YP_007175350.1|	-	0.00031	20.1	0.0	0.11	11.7	0.0	2.3	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_17	PF13207.6	gi|429217360|ref|YP_007175350.1|	-	0.00052	20.5	0.0	0.84	10.1	0.0	3.1	2	0	0	2	2	2	1	AAA	domain
ATPase_2	PF01637.18	gi|429217360|ref|YP_007175350.1|	-	0.00065	19.7	0.2	0.24	11.3	0.0	3.0	2	2	0	2	2	2	1	ATPase	domain	predominantly	from	Archaea
Rad17	PF03215.15	gi|429217360|ref|YP_007175350.1|	-	0.00079	19.4	0.0	3.3	7.6	0.0	3.2	2	1	1	3	3	3	0	Rad17	P-loop	domain
AAA_11	PF13086.6	gi|429217360|ref|YP_007175350.1|	-	0.00082	19.2	0.0	1.4	8.7	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
AAA_19	PF13245.6	gi|429217360|ref|YP_007175350.1|	-	0.00098	19.5	0.7	2.3	8.6	0.3	3.0	2	1	0	2	2	2	1	AAA	domain
AAA_30	PF13604.6	gi|429217360|ref|YP_007175350.1|	-	0.0038	17.0	0.6	2.9	7.6	0.1	2.7	2	0	0	2	2	2	1	AAA	domain
Sigma54_activ_2	PF14532.6	gi|429217360|ref|YP_007175350.1|	-	0.0043	17.2	0.0	3.6	7.7	0.0	2.5	2	0	0	2	2	2	0	Sigma-54	interaction	domain
AFG1_ATPase	PF03969.16	gi|429217360|ref|YP_007175350.1|	-	0.0089	15.0	0.0	4.3	6.1	0.0	2.8	3	0	0	3	3	3	0	AFG1-like	ATPase
Molydop_binding	PF01568.21	gi|429217360|ref|YP_007175350.1|	-	0.0092	16.0	0.2	0.031	14.3	0.0	2.0	2	0	0	2	2	1	1	Molydopterin	dinucleotide	binding	domain
AAA_6	PF12774.7	gi|429217360|ref|YP_007175350.1|	-	0.0095	14.9	0.2	0.37	9.7	0.0	2.7	3	0	0	3	3	3	1	Hydrolytic	ATP	binding	site	of	dynein	motor	region
T2SSE	PF00437.20	gi|429217360|ref|YP_007175350.1|	-	0.0098	15.0	0.0	2	7.4	0.0	2.7	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
PduV-EutP	PF10662.9	gi|429217360|ref|YP_007175350.1|	-	0.011	15.4	0.1	2.9	7.6	0.0	2.5	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
Cytidylate_kin	PF02224.18	gi|429217360|ref|YP_007175350.1|	-	0.015	15.0	0.1	4.7	6.9	0.0	2.4	2	0	0	2	2	2	0	Cytidylate	kinase
NB-ARC	PF00931.22	gi|429217360|ref|YP_007175350.1|	-	0.017	14.3	0.0	4.4	6.4	0.0	2.5	2	0	0	2	2	2	0	NB-ARC	domain
IPT	PF01745.16	gi|429217360|ref|YP_007175350.1|	-	0.023	14.1	0.6	3.8	6.8	0.1	2.5	2	0	0	2	2	2	0	Isopentenyl	transferase
Guanylate_kin	PF00625.21	gi|429217360|ref|YP_007175350.1|	-	0.024	14.4	0.3	25	4.5	0.0	4.0	2	2	2	4	4	4	0	Guanylate	kinase
SKI	PF01202.22	gi|429217360|ref|YP_007175350.1|	-	0.042	14.0	0.0	11	6.1	0.0	2.5	2	0	0	2	2	2	0	Shikimate	kinase
AAA_29	PF13555.6	gi|429217360|ref|YP_007175350.1|	-	0.089	12.6	0.1	17	5.2	0.0	2.4	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
Cytidylate_kin2	PF13189.6	gi|429217360|ref|YP_007175350.1|	-	0.12	12.5	0.0	13	5.8	0.0	2.4	2	0	0	2	2	2	0	Cytidylate	kinase-like	family
ResIII	PF04851.15	gi|429217360|ref|YP_007175350.1|	-	0.12	12.3	0.0	23	4.9	0.0	2.6	2	1	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
Viral_helicase1	PF01443.18	gi|429217360|ref|YP_007175350.1|	-	0.12	12.0	0.0	7.2	6.3	0.0	2.3	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
Hydin_ADK	PF17213.3	gi|429217360|ref|YP_007175350.1|	-	0.2	11.9	0.0	18	5.5	0.0	2.3	2	0	0	2	2	2	0	Hydin	Adenylate	kinase-like	domain
NTPase_1	PF03266.15	gi|429217360|ref|YP_007175350.1|	-	0.34	10.8	5.8	26	4.7	0.1	3.8	3	1	0	4	4	3	0	NTPase
Ribosomal_S19e	PF01090.19	gi|429217361|ref|YP_007175351.1|	-	2.7e-56	189.1	0.0	3e-56	188.9	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S19e
Rrf2	PF02082.20	gi|429217361|ref|YP_007175351.1|	-	0.086	13.2	0.4	0.21	11.9	0.1	1.8	2	0	0	2	2	2	0	Transcriptional	regulator
HTH_3	PF01381.22	gi|429217362|ref|YP_007175352.1|	-	0.0025	17.8	0.0	0.0059	16.6	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix
Pox_H7	PF04787.12	gi|429217362|ref|YP_007175352.1|	-	0.053	14.0	0.2	0.079	13.5	0.2	1.3	1	0	0	1	1	1	0	Late	protein	H7
ATP-grasp_5	PF13549.6	gi|429217363|ref|YP_007175353.1|	-	3.6e-70	235.9	1.0	4.6e-70	235.5	0.4	1.5	2	0	0	2	2	2	1	ATP-grasp	domain
Succ_CoA_lig	PF13607.6	gi|429217363|ref|YP_007175353.1|	-	8.6e-48	161.7	0.3	9.5e-47	158.3	0.1	2.6	3	0	0	3	3	3	1	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding_2	PF13380.6	gi|429217363|ref|YP_007175353.1|	-	1.1e-23	84.0	0.0	4.5e-23	81.9	0.0	2.1	2	0	0	2	2	2	1	CoA	binding	domain
CoA_binding	PF02629.19	gi|429217363|ref|YP_007175353.1|	-	2.2e-11	44.3	0.7	1e-10	42.1	0.2	2.5	2	0	0	2	2	2	1	CoA	binding	domain
BRCA2	PF00634.18	gi|429217363|ref|YP_007175353.1|	-	0.34	10.6	1.7	0.44	10.3	0.5	1.8	2	0	0	2	2	2	0	BRCA2	repeat
FliJ	PF02050.16	gi|429217364|ref|YP_007175354.1|	-	0.001	19.3	14.0	0.001	19.3	14.0	4.1	2	2	1	4	4	4	1	Flagellar	FliJ	protein
DUF948	PF06103.11	gi|429217364|ref|YP_007175354.1|	-	0.0014	18.9	15.0	0.18	12.1	0.3	4.5	1	1	3	4	4	4	2	Bacterial	protein	of	unknown	function	(DUF948)
ZapB	PF06005.12	gi|429217364|ref|YP_007175354.1|	-	0.0089	16.5	5.3	0.0089	16.5	5.3	5.5	1	1	3	5	5	4	3	Cell	division	protein	ZapB
DUF641	PF04859.12	gi|429217364|ref|YP_007175354.1|	-	0.0089	16.4	6.3	0.0089	16.4	6.3	4.3	2	2	1	3	3	2	1	Plant	protein	of	unknown	function	(DUF641)
PspA_IM30	PF04012.12	gi|429217364|ref|YP_007175354.1|	-	0.016	14.8	1.3	0.016	14.8	1.3	4.1	1	1	4	5	5	4	0	PspA/IM30	family
Laminin_II	PF06009.12	gi|429217364|ref|YP_007175354.1|	-	0.018	15.1	5.5	0.018	15.1	5.5	4.1	1	1	4	5	5	5	0	Laminin	Domain	II
Prefoldin	PF02996.17	gi|429217364|ref|YP_007175354.1|	-	0.019	14.9	1.4	0.019	14.9	1.4	6.3	3	2	5	8	8	8	0	Prefoldin	subunit
Snapin_Pallidin	PF14712.6	gi|429217364|ref|YP_007175354.1|	-	0.022	15.2	4.4	0.022	15.2	4.4	4.3	2	2	2	4	4	4	0	Snapin/Pallidin
SHE3	PF17078.5	gi|429217364|ref|YP_007175354.1|	-	0.026	14.2	45.3	0.16	11.6	14.5	3.1	1	1	2	3	3	3	0	SWI5-dependent	HO	expression	protein	3
Filament	PF00038.21	gi|429217364|ref|YP_007175354.1|	-	0.038	13.6	49.5	0.017	14.7	7.8	4.1	1	1	2	3	3	3	0	Intermediate	filament	protein
HsbA	PF12296.8	gi|429217364|ref|YP_007175354.1|	-	0.04	14.3	7.8	1.4	9.4	0.1	4.1	4	1	1	5	5	4	0	Hydrophobic	surface	binding	protein	A
Spc7	PF08317.11	gi|429217364|ref|YP_007175354.1|	-	0.046	12.6	55.6	0.055	12.3	29.8	3.5	1	1	2	3	3	3	0	Spc7	kinetochore	protein
DUF3584	PF12128.8	gi|429217364|ref|YP_007175354.1|	-	0.076	10.5	46.2	0.0053	14.4	16.8	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3584)
Seryl_tRNA_N	PF02403.22	gi|429217364|ref|YP_007175354.1|	-	0.1	12.8	55.3	0.25	11.6	12.2	4.9	1	1	3	4	4	4	0	Seryl-tRNA	synthetase	N-terminal	domain
HtaA	PF04213.13	gi|429217364|ref|YP_007175354.1|	-	0.23	12.0	1.9	0.59	10.6	0.2	2.3	2	1	1	3	3	3	0	Htaa
Sec34	PF04136.15	gi|429217364|ref|YP_007175354.1|	-	0.23	11.3	26.9	1.3	8.9	1.0	4.1	2	2	2	4	4	4	0	Sec34-like	family
Atg14	PF10186.9	gi|429217364|ref|YP_007175354.1|	-	0.45	9.6	55.9	0.015	14.4	17.8	3.0	1	1	2	3	3	3	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
FUSC	PF04632.12	gi|429217364|ref|YP_007175354.1|	-	0.47	8.9	8.8	17	3.8	0.0	2.1	1	1	1	2	2	2	0	Fusaric	acid	resistance	protein	family
MtrB	PF05440.12	gi|429217364|ref|YP_007175354.1|	-	0.5	10.8	2.4	20	5.7	0.0	4.0	1	1	4	5	5	5	0	Tetrahydromethanopterin	S-methyltransferase	subunit	B
GAS	PF13851.6	gi|429217364|ref|YP_007175354.1|	-	0.73	9.1	57.0	0.11	11.8	20.8	2.7	1	1	1	2	2	2	0	Growth-arrest	specific	micro-tubule	binding
Syntaxin_2	PF14523.6	gi|429217364|ref|YP_007175354.1|	-	1.2	9.6	42.6	0.12	12.7	11.5	3.5	1	1	3	4	4	4	0	Syntaxin-like	protein
HMMR_N	PF15905.5	gi|429217364|ref|YP_007175354.1|	-	1.2	8.6	58.8	0.036	13.5	16.9	2.5	1	1	1	2	2	2	0	Hyaluronan	mediated	motility	receptor	N-terminal
FAM184	PF15665.5	gi|429217364|ref|YP_007175354.1|	-	1.6	8.5	49.7	1.7	8.4	13.2	3.2	1	1	2	3	3	3	0	Family	with	sequence	similarity	184,	A	and	B
APG6_N	PF17675.1	gi|429217364|ref|YP_007175354.1|	-	1.9	9.0	63.4	1.7	9.2	21.9	4.8	1	1	4	5	5	5	0	Apg6	coiled-coil	region
MCPsignal	PF00015.21	gi|429217364|ref|YP_007175354.1|	-	2.1	8.1	12.0	0.2	11.4	2.0	2.7	1	1	2	3	3	3	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
DUF4763	PF15960.5	gi|429217364|ref|YP_007175354.1|	-	2.2	7.5	40.1	0.02	14.2	13.8	3.1	1	1	1	2	2	1	0	Domain	of	unknown	function	(DUF4763)
DUF4407	PF14362.6	gi|429217364|ref|YP_007175354.1|	-	2.2	7.6	35.7	1.8e+04	-10.9	35.7	3.0	1	1	0	1	1	0	0	Domain	of	unknown	function	(DUF4407)
DUF1664	PF07889.12	gi|429217364|ref|YP_007175354.1|	-	3.4	7.7	34.4	6.4	6.8	6.5	4.2	1	1	3	4	4	4	0	Protein	of	unknown	function	(DUF1664)
DUF812	PF05667.11	gi|429217364|ref|YP_007175354.1|	-	4.7	6.0	50.8	0.84	8.4	18.2	2.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF812)
ERM	PF00769.19	gi|429217364|ref|YP_007175354.1|	-	4.8	6.9	49.9	2	8.2	25.3	2.7	1	1	1	2	2	2	0	Ezrin/radixin/moesin	family
DUF4988	PF16378.5	gi|429217364|ref|YP_007175354.1|	-	6.8	6.3	16.7	0.053	13.2	1.8	3.3	2	2	2	4	4	4	0	Domain	of	unknown	function
AAA_13	PF13166.6	gi|429217364|ref|YP_007175354.1|	-	7	5.2	41.1	3.6e+02	-0.5	40.8	2.2	1	1	0	1	1	1	0	AAA	domain
HOOK	PF05622.12	gi|429217364|ref|YP_007175354.1|	-	8.5	4.4	54.9	1.4	7.0	14.4	2.3	1	1	1	2	2	2	0	HOOK	protein
DUF447	PF04289.12	gi|429217365|ref|YP_007175355.1|	-	1.4e-06	28.2	0.0	1.7e-06	27.9	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF447)
MAF_flag10	PF01973.18	gi|429217366|ref|YP_007175356.1|	-	1.1e-05	25.3	1.3	3.3e-05	23.7	1.3	1.8	1	1	0	1	1	1	1	Protein	of	unknown	function	DUF115
Glu-tRNAGln	PF02686.15	gi|429217366|ref|YP_007175356.1|	-	0.062	13.6	0.1	0.32	11.3	0.0	2.1	2	0	0	2	2	2	0	Glu-tRNAGln	amidotransferase	C	subunit
UPF0122	PF04297.14	gi|429217366|ref|YP_007175356.1|	-	0.41	10.9	4.0	0.42	10.9	0.8	2.3	2	0	0	2	2	2	0	Putative	helix-turn-helix	protein,	YlxM	/	p13	like
MoeA_N	PF03453.17	gi|429217367|ref|YP_007175357.1|	-	6.1e-41	139.8	0.0	9.4e-41	139.2	0.0	1.3	1	0	0	1	1	1	1	MoeA	N-terminal	region	(domain	I	and	II)
MoCF_biosynth	PF00994.24	gi|429217367|ref|YP_007175357.1|	-	3.6e-25	88.3	0.7	6.7e-25	87.4	0.1	1.7	2	0	0	2	2	2	1	Probable	molybdopterin	binding	domain
MoeA_C	PF03454.15	gi|429217367|ref|YP_007175357.1|	-	1.1e-14	54.3	0.0	3e-14	52.9	0.0	1.8	2	0	0	2	2	2	1	MoeA	C-terminal	region	(domain	IV)
ZT_dimer	PF16916.5	gi|429217367|ref|YP_007175357.1|	-	0.05	13.7	0.1	0.19	11.9	0.0	1.9	2	0	0	2	2	2	0	Dimerisation	domain	of	Zinc	Transporter
TRM	PF02005.16	gi|429217368|ref|YP_007175358.1|	-	3.7e-88	296.2	1.2	1.9e-87	293.9	1.2	1.8	1	1	0	1	1	1	1	N2,N2-dimethylguanosine	tRNA	methyltransferase
Met_10	PF02475.16	gi|429217368|ref|YP_007175358.1|	-	0.0051	16.6	0.2	0.0085	15.9	0.2	1.4	1	0	0	1	1	1	1	Met-10+	like-protein
HTH_6	PF01418.17	gi|429217368|ref|YP_007175358.1|	-	0.042	13.8	0.0	0.087	12.8	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain,	rpiR	family
NTPase_1	PF03266.15	gi|429217369|ref|YP_007175359.1|	-	1.5e-42	145.4	0.4	1.7e-42	145.2	0.4	1.0	1	0	0	1	1	1	1	NTPase
AAA_22	PF13401.6	gi|429217369|ref|YP_007175359.1|	-	1.2e-05	25.6	0.0	2e-05	24.8	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.6	gi|429217369|ref|YP_007175359.1|	-	4.9e-05	23.9	0.3	9.5e-05	22.9	0.3	1.5	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.29	gi|429217369|ref|YP_007175359.1|	-	7.1e-05	23.2	1.7	0.00054	20.4	1.7	2.0	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.12	gi|429217369|ref|YP_007175359.1|	-	8.9e-05	22.3	0.1	0.29	10.9	0.0	2.2	2	0	0	2	2	2	2	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_19	PF13245.6	gi|429217369|ref|YP_007175359.1|	-	0.0029	18.0	0.1	0.016	15.6	0.1	1.9	1	1	0	1	1	1	1	AAA	domain
DUF2075	PF09848.9	gi|429217369|ref|YP_007175359.1|	-	0.0039	16.5	0.0	0.0042	16.4	0.0	1.1	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
ATPase	PF06745.13	gi|429217369|ref|YP_007175359.1|	-	0.0065	15.8	1.2	0.018	14.4	1.2	1.7	1	1	0	1	1	1	1	KaiC
IstB_IS21	PF01695.17	gi|429217369|ref|YP_007175359.1|	-	0.0065	16.2	0.3	4	7.1	0.0	2.3	1	1	0	2	2	2	2	IstB-like	ATP	binding	protein
AAA_30	PF13604.6	gi|429217369|ref|YP_007175359.1|	-	0.0077	16.0	0.0	0.021	14.5	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
MMR_HSR1	PF01926.23	gi|429217369|ref|YP_007175359.1|	-	0.0079	16.3	0.3	0.015	15.4	0.2	1.6	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
APS_kinase	PF01583.20	gi|429217369|ref|YP_007175359.1|	-	0.0084	16.0	0.1	0.03	14.2	0.1	1.9	2	0	0	2	2	2	1	Adenylylsulphate	kinase
Thymidylate_kin	PF02223.17	gi|429217369|ref|YP_007175359.1|	-	0.014	15.1	0.2	0.046	13.4	0.0	1.9	2	1	0	2	2	2	0	Thymidylate	kinase
ADK	PF00406.22	gi|429217369|ref|YP_007175359.1|	-	0.029	14.5	0.2	0.044	13.9	0.2	1.6	1	1	0	1	1	1	0	Adenylate	kinase
AAA_24	PF13479.6	gi|429217369|ref|YP_007175359.1|	-	0.03	14.0	1.7	0.17	11.6	1.7	2.1	1	1	0	1	1	1	0	AAA	domain
NACHT	PF05729.12	gi|429217369|ref|YP_007175359.1|	-	0.044	13.7	0.1	0.062	13.2	0.1	1.7	1	1	0	1	1	1	0	NACHT	domain
ABC_tran	PF00005.27	gi|429217369|ref|YP_007175359.1|	-	0.047	14.2	0.1	0.067	13.7	0.1	1.3	1	0	0	1	1	1	0	ABC	transporter
RNA_helicase	PF00910.22	gi|429217369|ref|YP_007175359.1|	-	0.065	13.6	0.2	0.32	11.4	0.2	2.3	1	1	0	1	1	1	0	RNA	helicase
AAA_14	PF13173.6	gi|429217369|ref|YP_007175359.1|	-	0.069	13.2	7.0	0.61	10.1	1.8	3.0	1	1	1	2	2	2	0	AAA	domain
DnaB_C	PF03796.15	gi|429217369|ref|YP_007175359.1|	-	0.075	12.3	0.0	0.18	11.1	0.0	1.6	1	1	0	1	1	1	0	DnaB-like	helicase	C	terminal	domain
NB-ARC	PF00931.22	gi|429217369|ref|YP_007175359.1|	-	0.079	12.1	0.1	0.12	11.5	0.1	1.4	1	1	0	1	1	1	0	NB-ARC	domain
AAA_5	PF07728.14	gi|429217369|ref|YP_007175359.1|	-	0.081	12.9	0.3	0.91	9.5	0.3	2.1	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_26	PF13500.6	gi|429217369|ref|YP_007175359.1|	-	0.1	12.4	0.2	0.19	11.5	0.2	1.5	1	1	0	1	1	1	0	AAA	domain
AAA_17	PF13207.6	gi|429217369|ref|YP_007175359.1|	-	0.14	12.6	0.1	0.25	11.8	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_25	PF13481.6	gi|429217369|ref|YP_007175359.1|	-	0.19	11.3	0.1	1.3	8.6	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
HTH_3	PF01381.22	gi|429217370|ref|YP_007175360.1|	-	6.2e-10	39.0	0.1	2.7e-09	36.9	0.1	2.1	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.7	gi|429217370|ref|YP_007175360.1|	-	4.3e-08	33.1	0.6	2.1e-07	30.8	0.2	2.3	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_31	PF13560.6	gi|429217370|ref|YP_007175360.1|	-	0.00011	22.5	0.0	0.00022	21.5	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.6	gi|429217370|ref|YP_007175360.1|	-	0.0082	15.9	0.0	0.062	13.1	0.0	2.3	2	0	0	2	2	2	1	Homeodomain-like	domain
HTH_25	PF13413.6	gi|429217370|ref|YP_007175360.1|	-	0.013	15.3	0.1	0.057	13.3	0.1	2.1	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_11	PF08279.12	gi|429217370|ref|YP_007175360.1|	-	0.022	14.7	0.4	0.14	12.1	0.0	2.6	3	0	0	3	3	3	0	HTH	domain
Sigma70_r4_2	PF08281.12	gi|429217370|ref|YP_007175360.1|	-	0.028	14.1	0.4	0.9	9.3	0.0	2.5	2	0	0	2	2	2	0	Sigma-70,	region	4
HTH_17	PF12728.7	gi|429217370|ref|YP_007175360.1|	-	0.056	13.6	0.8	0.16	12.2	0.0	2.2	3	0	0	3	3	3	0	Helix-turn-helix	domain
HTH_22	PF13309.6	gi|429217370|ref|YP_007175360.1|	-	0.066	13.3	0.1	0.51	10.4	0.0	2.5	2	0	0	2	2	2	0	HTH	domain
HTH_28	PF13518.6	gi|429217370|ref|YP_007175360.1|	-	0.072	13.2	0.0	0.25	11.5	0.0	1.9	1	0	0	1	1	1	0	Helix-turn-helix	domain
SHMT	PF00464.19	gi|429217372|ref|YP_007175362.1|	-	5.1e-66	222.9	0.1	6.5e-66	222.6	0.1	1.1	1	0	0	1	1	1	1	Serine	hydroxymethyltransferase
Beta_elim_lyase	PF01212.21	gi|429217372|ref|YP_007175362.1|	-	5.7e-09	35.7	0.0	1.2e-08	34.7	0.0	1.5	1	1	0	1	1	1	1	Beta-eliminating	lyase
Aminotran_1_2	PF00155.21	gi|429217372|ref|YP_007175362.1|	-	1.8e-07	30.7	0.0	5.5e-07	29.1	0.0	1.7	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
SelA	PF03841.13	gi|429217372|ref|YP_007175362.1|	-	0.043	12.8	0.0	0.15	11.0	0.0	1.8	1	1	0	1	1	1	0	L-seryl-tRNA	selenium	transferase
DUF1664	PF07889.12	gi|429217372|ref|YP_007175362.1|	-	0.064	13.3	0.2	10	6.2	0.2	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
Cys_Met_Meta_PP	PF01053.20	gi|429217372|ref|YP_007175362.1|	-	0.11	11.0	0.0	0.16	10.5	0.0	1.4	1	0	0	1	1	1	0	Cys/Met	metabolism	PLP-dependent	enzyme
SLATT_fungal	PF18142.1	gi|429217372|ref|YP_007175362.1|	-	0.13	12.3	0.5	0.25	11.3	0.5	1.4	1	0	0	1	1	1	0	SMODS	and	SLOG-associating	2TM	effector	domain
zf-C2H2_4	PF13894.6	gi|429217373|ref|YP_007175363.1|	-	0.0037	18.0	0.2	0.0057	17.4	0.2	1.3	1	0	0	1	1	1	1	C2H2-type	zinc	finger
zf-C2H2_jaz	PF12171.8	gi|429217373|ref|YP_007175363.1|	-	0.0053	17.0	0.1	0.011	16.0	0.1	1.6	1	0	0	1	1	1	1	Zinc-finger	double-stranded	RNA-binding
zf-Di19	PF05605.12	gi|429217373|ref|YP_007175363.1|	-	0.028	14.7	0.1	0.041	14.2	0.1	1.2	1	0	0	1	1	1	0	Drought	induced	19	protein	(Di19),	zinc-binding
zf-met	PF12874.7	gi|429217373|ref|YP_007175363.1|	-	0.052	13.9	0.2	0.096	13.1	0.2	1.5	1	0	0	1	1	1	0	Zinc-finger	of	C2H2	type
zf-C2H2	PF00096.26	gi|429217373|ref|YP_007175363.1|	-	0.11	13.0	0.2	0.21	12.1	0.2	1.5	1	0	0	1	1	1	0	Zinc	finger,	C2H2	type
TF_Zn_Ribbon	PF08271.12	gi|429217373|ref|YP_007175363.1|	-	0.12	12.0	0.0	0.2	11.2	0.0	1.5	1	0	0	1	1	1	0	TFIIB	zinc-binding
PadR	PF03551.14	gi|429217374|ref|YP_007175364.1|	-	1.8e-10	40.6	0.1	4.2e-10	39.4	0.1	1.6	2	0	0	2	2	2	1	Transcriptional	regulator	PadR-like	family
Mrr_N	PF14338.6	gi|429217374|ref|YP_007175364.1|	-	2.8e-06	27.4	0.0	0.0033	17.5	0.1	2.2	1	1	1	2	2	2	2	Mrr	N-terminal	domain
RTP	PF02334.16	gi|429217374|ref|YP_007175364.1|	-	0.0026	18.4	0.1	0.0046	17.6	0.1	1.5	1	1	0	1	1	1	1	Replication	terminator	protein
DUF4364	PF14277.6	gi|429217374|ref|YP_007175364.1|	-	0.0061	16.3	0.3	0.012	15.4	0.2	1.5	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4364)
DUF505	PF04458.12	gi|429217374|ref|YP_007175364.1|	-	0.011	14.1	0.1	0.014	13.8	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF505)
HTH_45	PF14947.6	gi|429217374|ref|YP_007175364.1|	-	0.021	14.8	0.3	0.035	14.1	0.3	1.3	1	0	0	1	1	1	0	Winged	helix-turn-helix
MarR	PF01047.22	gi|429217374|ref|YP_007175364.1|	-	0.033	14.1	0.1	0.12	12.4	0.0	2.0	2	1	1	3	3	3	0	MarR	family
Ribosomal_S19e	PF01090.19	gi|429217374|ref|YP_007175364.1|	-	0.097	12.4	0.0	0.14	11.9	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	protein	S19e
HTH_12	PF08461.10	gi|429217374|ref|YP_007175364.1|	-	0.11	12.5	0.3	0.17	11.8	0.3	1.6	1	1	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
AA_permease	PF00324.21	gi|429217374|ref|YP_007175364.1|	-	0.13	10.8	0.2	0.16	10.6	0.2	1.0	1	0	0	1	1	1	0	Amino	acid	permease
Aminotran_1_2	PF00155.21	gi|429217375|ref|YP_007175365.1|	-	3.5e-55	187.6	0.0	4e-55	187.5	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Cys_Met_Meta_PP	PF01053.20	gi|429217375|ref|YP_007175365.1|	-	2.3e-09	36.3	0.0	3.3e-09	35.8	0.0	1.1	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
DegT_DnrJ_EryC1	PF01041.17	gi|429217375|ref|YP_007175365.1|	-	1.3e-06	28.0	0.0	2e-06	27.4	0.0	1.2	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_5	PF00266.19	gi|429217375|ref|YP_007175365.1|	-	0.00062	18.8	0.0	0.0015	17.5	0.0	1.6	2	0	0	2	2	2	1	Aminotransferase	class-V
KH_5	PF13184.6	gi|429217375|ref|YP_007175365.1|	-	0.027	14.5	0.3	55	3.9	0.0	3.7	3	0	0	3	3	3	0	NusA-like	KH	domain
DUF5388	PF17363.2	gi|429217376|ref|YP_007175366.1|	-	0.00038	20.6	0.0	0.00093	19.3	0.0	1.7	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5388)
VapB_antitoxin	PF09957.9	gi|429217376|ref|YP_007175366.1|	-	0.00072	19.4	0.2	0.0031	17.4	0.2	2.1	1	1	0	1	1	1	1	Bacterial	antitoxin	of	type	II	TA	system,	VapB
RHH_8	PF17723.1	gi|429217376|ref|YP_007175366.1|	-	0.001	19.3	0.1	0.0027	17.9	0.1	1.8	1	1	0	1	1	1	1	Ribbon-Helix-Helix	transcriptional	regulator	family
UPF0175	PF03683.13	gi|429217376|ref|YP_007175366.1|	-	0.0018	17.9	0.1	0.0061	16.2	0.0	2.0	2	0	0	2	2	2	1	Uncharacterised	protein	family	(UPF0175)
RHH_1	PF01402.21	gi|429217376|ref|YP_007175366.1|	-	0.0038	17.1	2.0	0.0071	16.2	0.1	2.5	3	0	0	3	3	3	1	Ribbon-helix-helix	protein,	copG	family
Rhabdo_ncap	PF00945.18	gi|429217376|ref|YP_007175366.1|	-	0.0083	15.1	0.0	0.013	14.4	0.0	1.3	1	0	0	1	1	1	1	Rhabdovirus	nucleocapsid	protein
PIN_4	PF13638.6	gi|429217376|ref|YP_007175366.1|	-	0.027	14.8	0.4	0.063	13.6	0.4	1.7	1	1	0	1	1	1	0	PIN	domain
DSBA	PF01323.20	gi|429217376|ref|YP_007175366.1|	-	0.088	12.6	0.0	0.22	11.3	0.0	1.7	1	0	0	1	1	1	0	DSBA-like	thioredoxin	domain
VWA_2	PF13519.6	gi|429217377|ref|YP_007175367.1|	-	5.1e-11	43.2	0.0	8.8e-11	42.4	0.0	1.3	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.28	gi|429217377|ref|YP_007175367.1|	-	0.00012	22.3	0.0	0.00017	21.9	0.0	1.2	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
Ssl1	PF04056.14	gi|429217377|ref|YP_007175367.1|	-	0.098	12.5	0.0	0.14	11.9	0.0	1.3	1	0	0	1	1	1	0	Ssl1-like
Humanin	PF15040.6	gi|429217377|ref|YP_007175367.1|	-	0.33	10.4	1.3	0.87	9.1	0.9	1.9	2	0	0	2	2	2	0	Humanin	family
Molybdopterin	PF00384.22	gi|429217378|ref|YP_007175368.1|	-	1.5e-88	297.7	0.0	2.2e-88	297.1	0.0	1.3	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase
Molydop_binding	PF01568.21	gi|429217378|ref|YP_007175368.1|	-	1.3e-25	89.6	0.0	2.3e-25	88.8	0.0	1.4	1	0	0	1	1	1	1	Molydopterin	dinucleotide	binding	domain
Molybdop_Fe4S4	PF04879.16	gi|429217378|ref|YP_007175368.1|	-	1.7e-18	66.3	1.4	1.7e-18	66.3	1.4	2.0	2	0	0	2	2	1	1	Molybdopterin	oxidoreductase	Fe4S4	domain
Fer2_4	PF13510.6	gi|429217378|ref|YP_007175368.1|	-	3.4e-14	52.7	0.0	9.4e-14	51.2	0.0	1.8	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_7	PF12838.7	gi|429217378|ref|YP_007175368.1|	-	1.2e-07	32.2	5.7	1.2e-07	32.2	5.7	3.1	3	1	0	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|429217378|ref|YP_007175368.1|	-	2.6e-07	30.7	9.3	7.3e-07	29.2	7.0	2.8	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|429217378|ref|YP_007175368.1|	-	4.8e-07	29.3	1.5	4.8e-07	29.3	1.5	3.3	4	0	0	4	4	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|429217378|ref|YP_007175368.1|	-	5.7e-07	29.4	24.7	6.7e-05	22.8	2.2	4.0	4	0	0	4	4	4	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|429217378|ref|YP_007175368.1|	-	1.2e-06	28.6	5.2	1.2e-06	28.6	5.2	2.8	3	1	1	4	4	3	2	4Fe-4S	dicluster	domain
Fer2	PF00111.27	gi|429217378|ref|YP_007175368.1|	-	1.1e-05	25.3	0.0	1.1e-05	25.3	0.0	2.0	2	1	0	2	2	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_10	PF13237.6	gi|429217378|ref|YP_007175368.1|	-	2.1e-05	24.5	11.7	0.019	15.1	4.3	2.8	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|429217378|ref|YP_007175368.1|	-	0.00042	20.7	8.2	0.00042	20.7	8.2	2.9	3	1	1	4	4	3	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|429217378|ref|YP_007175368.1|	-	0.002	18.8	8.5	0.099	13.4	1.6	2.9	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_16	PF13484.6	gi|429217378|ref|YP_007175368.1|	-	0.0023	18.8	13.0	0.013	16.4	5.2	3.2	3	0	0	3	3	2	1	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.7	gi|429217378|ref|YP_007175368.1|	-	0.0051	16.8	2.9	0.0051	16.8	2.9	3.3	4	0	0	4	4	2	2	4Fe-4S	binding	domain
D5_N	PF08706.11	gi|429217378|ref|YP_007175368.1|	-	0.0053	17.0	0.1	2.5	8.3	0.0	2.6	2	1	0	2	2	2	1	D5	N	terminal	like
Fer4_18	PF13746.6	gi|429217378|ref|YP_007175368.1|	-	0.015	15.5	12.1	0.042	14.0	0.5	2.7	3	0	0	3	3	2	0	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|429217378|ref|YP_007175368.1|	-	0.015	16.2	4.0	1.2	10.0	0.7	2.8	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|429217378|ref|YP_007175368.1|	-	0.026	15.0	3.3	0.026	15.0	3.3	3.5	4	0	0	4	4	3	0	4Fe-4S	binding	domain
Fer4_3	PF12798.7	gi|429217378|ref|YP_007175368.1|	-	0.029	15.3	6.0	0.029	15.3	6.0	3.5	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|429217378|ref|YP_007175368.1|	-	0.085	13.4	15.0	0.22	12.1	10.9	3.0	2	1	1	3	3	2	0	4Fe-4S	dicluster	domain
GED	PF02212.18	gi|429217378|ref|YP_007175368.1|	-	0.22	11.7	0.9	10	6.3	0.1	2.6	2	0	0	2	2	2	0	Dynamin	GTPase	effector	domain
Fer4_13	PF13370.6	gi|429217378|ref|YP_007175368.1|	-	0.23	12.0	11.1	2.9	8.5	2.1	2.7	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Complex1_51K	PF01512.17	gi|429217379|ref|YP_007175369.1|	-	8.7e-47	158.8	0.1	1.4e-46	158.1	0.1	1.4	1	0	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase	51	Kd	subunit
NADH_4Fe-4S	PF10589.9	gi|429217379|ref|YP_007175369.1|	-	1.8e-19	69.6	0.0	3.1e-19	68.8	0.0	1.4	1	0	0	1	1	1	1	NADH-ubiquinone	oxidoreductase-F	iron-sulfur	binding	region
SLBB	PF10531.9	gi|429217379|ref|YP_007175369.1|	-	0.13	12.1	0.1	0.31	10.9	0.1	1.6	1	0	0	1	1	1	0	SLBB	domain
AA_kinase	PF00696.28	gi|429217380|ref|YP_007175370.1|	-	7.3e-24	84.7	0.0	1.3e-23	83.8	0.0	1.4	1	1	0	1	1	1	1	Amino	acid	kinase	family
Phage_Gp19	PF09355.10	gi|429217380|ref|YP_007175370.1|	-	0.15	12.5	0.0	0.35	11.3	0.0	1.6	1	0	0	1	1	1	0	Phage	protein	Gp19/Gp15/Gp42
ATP-synt_ab	PF00006.25	gi|429217381|ref|YP_007175371.1|	-	3.3e-67	226.3	0.0	4.5e-67	225.8	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_N	PF02874.23	gi|429217381|ref|YP_007175371.1|	-	1.6e-13	50.9	4.0	1.6e-13	50.9	4.0	1.8	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
HAS-barrel	PF09378.10	gi|429217381|ref|YP_007175371.1|	-	9.9e-05	22.4	2.1	0.00034	20.7	2.1	1.9	1	0	0	1	1	1	1	HAS	barrel	domain
ATP-synt_ab	PF00006.25	gi|429217382|ref|YP_007175372.1|	-	4.1e-90	301.1	0.0	5.5e-90	300.7	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_Xtn	PF16886.5	gi|429217382|ref|YP_007175372.1|	-	7e-41	138.9	0.0	1.2e-40	138.1	0.0	1.4	1	0	0	1	1	1	1	ATPsynthase	alpha/beta	subunit	N-term	extension
ATP-synt_ab_N	PF02874.23	gi|429217382|ref|YP_007175372.1|	-	6.4e-14	52.2	3.3	1.6e-13	50.9	3.3	1.8	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
HAS-barrel	PF09378.10	gi|429217382|ref|YP_007175372.1|	-	0.28	11.4	1.5	2.1	8.6	0.5	2.7	2	0	0	2	2	2	0	HAS	barrel	domain
vATP-synt_E	PF01991.18	gi|429217383|ref|YP_007175373.1|	-	3.3e-10	39.7	10.7	5.8e-10	38.9	10.7	1.5	1	1	0	1	1	1	1	ATP	synthase	(E/31	kDa)	subunit
Apolipoprotein	PF01442.18	gi|429217383|ref|YP_007175373.1|	-	0.002	18.0	0.6	0.0033	17.3	0.6	1.3	1	0	0	1	1	1	1	Apolipoprotein	A1/A4/E	domain
DNTTIP1_dimer	PF18192.1	gi|429217383|ref|YP_007175373.1|	-	0.0056	17.0	1.1	0.044	14.1	0.1	2.6	3	0	0	3	3	3	1	DNTTIP1	dimerisation	domain
dCache_3	PF14827.6	gi|429217383|ref|YP_007175373.1|	-	0.057	13.1	4.9	0.35	10.5	1.5	2.1	1	1	1	2	2	2	0	Double	sensory	domain	of	two-component	sensor	kinase
FeoB_Cyto	PF17910.1	gi|429217383|ref|YP_007175373.1|	-	0.094	13.3	5.2	0.076	13.6	2.4	2.3	2	1	0	2	2	2	0	FeoB	cytosolic	helical	domain
NPA	PF16469.5	gi|429217383|ref|YP_007175373.1|	-	0.26	11.9	7.4	0.047	14.3	3.2	1.9	2	1	0	2	2	2	0	Nematode	polyprotein	allergen	ABA-1
OmpH	PF03938.14	gi|429217383|ref|YP_007175373.1|	-	0.62	10.4	11.5	0.8	10.0	10.8	1.6	1	1	1	2	2	2	0	Outer	membrane	protein	(OmpH-like)
DUF4404	PF14357.6	gi|429217383|ref|YP_007175373.1|	-	1.9	9.1	4.8	17	6.1	0.7	2.8	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4404)
ATP-synt_F	PF01990.17	gi|429217384|ref|YP_007175374.1|	-	2.6e-07	30.9	0.1	3e-07	30.7	0.1	1.1	1	0	0	1	1	1	1	ATP	synthase	(F/14-kDa)	subunit
DUF3572	PF12096.8	gi|429217384|ref|YP_007175374.1|	-	0.094	12.9	0.0	0.16	12.2	0.0	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3572)
YCII	PF03795.14	gi|429217384|ref|YP_007175374.1|	-	0.15	12.5	0.0	0.23	11.9	0.0	1.4	1	0	0	1	1	1	0	YCII-related	domain
V_ATPase_I	PF01496.19	gi|429217385|ref|YP_007175375.1|	-	7e-36	123.5	18.0	5.6e-24	84.1	0.9	3.7	3	1	1	4	4	4	3	V-type	ATPase	116kDa	subunit	family
BLOC1_2	PF10046.9	gi|429217385|ref|YP_007175375.1|	-	0.014	15.7	5.5	0.064	13.6	1.6	2.4	2	0	0	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Tup_N	PF08581.10	gi|429217385|ref|YP_007175375.1|	-	0.021	15.1	2.4	0.24	11.7	0.1	2.5	2	0	0	2	2	2	0	Tup	N-terminal
DUF4559	PF15112.6	gi|429217385|ref|YP_007175375.1|	-	0.027	14.1	0.9	0.084	12.5	0.0	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4559)
COG5	PF10392.9	gi|429217385|ref|YP_007175375.1|	-	0.036	14.2	0.1	0.072	13.3	0.1	1.4	1	0	0	1	1	1	0	Golgi	transport	complex	subunit	5
Syntaphilin	PF15290.6	gi|429217385|ref|YP_007175375.1|	-	0.11	12.2	2.7	0.17	11.5	2.7	1.2	1	0	0	1	1	1	0	Golgi-localised	syntaxin-1-binding	clamp
DUF713	PF05218.14	gi|429217385|ref|YP_007175375.1|	-	0.11	12.2	5.5	0.023	14.4	1.4	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF713)
Baculo_PEP_C	PF04513.12	gi|429217385|ref|YP_007175375.1|	-	0.12	12.4	2.3	0.7	9.9	0.4	2.3	2	0	0	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Tektin	PF03148.14	gi|429217385|ref|YP_007175375.1|	-	0.31	9.7	1.6	3.6	6.3	0.3	2.1	2	0	0	2	2	2	0	Tektin	family
DUF4298	PF14131.6	gi|429217385|ref|YP_007175375.1|	-	0.48	10.4	5.6	0.18	11.8	1.4	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4298)
SPACA9	PF15120.6	gi|429217385|ref|YP_007175375.1|	-	1.4	8.6	3.6	13	5.5	0.2	2.8	3	0	0	3	3	3	0	Sperm	acrosome-associated	protein	9
Med30	PF11315.8	gi|429217385|ref|YP_007175375.1|	-	1.8	8.7	4.2	3	8.0	1.1	2.5	2	1	0	2	2	2	0	Mediator	complex	subunit	30
ZnuA	PF01297.17	gi|429217385|ref|YP_007175375.1|	-	3.3	7.0	5.0	0.42	10.0	0.7	1.6	2	0	0	2	2	2	0	Zinc-uptake	complex	component	A	periplasmic
PadR	PF03551.14	gi|429217386|ref|YP_007175376.1|	-	6.1e-19	67.8	0.2	8.9e-19	67.2	0.2	1.3	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
RTP	PF02334.16	gi|429217386|ref|YP_007175376.1|	-	0.00076	20.1	0.0	0.0085	16.7	0.0	2.0	1	1	1	2	2	2	1	Replication	terminator	protein
TP_methylase	PF00590.20	gi|429217387|ref|YP_007175377.1|	-	9.7e-15	55.1	0.0	1.3e-14	54.6	0.0	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
Peptidase_M50	PF02163.22	gi|429217388|ref|YP_007175378.1|	-	8.2e-11	41.6	8.2	1.1e-07	31.4	0.4	3.0	1	1	1	2	2	2	2	Peptidase	family	M50
GAGA_bind	PF06217.12	gi|429217390|ref|YP_007175380.1|	-	4.5	7.5	19.1	6	7.1	19.1	1.3	1	0	0	1	1	1	0	GAGA	binding	protein-like	family
FancD2	PF14631.6	gi|429217390|ref|YP_007175380.1|	-	5.7	4.2	16.6	5.8	4.2	16.6	1.2	1	0	0	1	1	1	0	Fanconi	anaemia	protein	FancD2	nuclease
Hydrolase_6	PF13344.6	gi|429217391|ref|YP_007175381.1|	-	0.063	13.4	0.0	0.096	12.8	0.0	1.3	1	0	0	1	1	1	0	Haloacid	dehalogenase-like	hydrolase
RNA_pol_Rpb6	PF01192.22	gi|429217392|ref|YP_007175382.1|	-	8.3e-12	44.9	0.0	1.1e-11	44.5	0.0	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb6
Ribosomal_L21e	PF01157.18	gi|429217393|ref|YP_007175383.1|	-	1e-32	112.0	1.3	1.1e-32	111.8	1.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L21e
RNA_pol_Rpb4	PF03874.16	gi|429217394|ref|YP_007175384.1|	-	7e-06	26.4	1.2	1.2e-05	25.6	1.2	1.4	1	1	0	1	1	1	1	RNA	polymerase	Rpb4
Topoisom_bac	PF01131.20	gi|429217395|ref|YP_007175385.1|	-	1.4e-103	347.1	0.1	1.8e-103	346.8	0.1	1.1	1	0	0	1	1	1	1	DNA	topoisomerase
Toprim	PF01751.22	gi|429217395|ref|YP_007175385.1|	-	2.8e-09	37.1	0.0	1.2e-08	35.0	0.0	2.1	1	0	0	1	1	1	1	Toprim	domain
Peptidase_S24	PF00717.23	gi|429217396|ref|YP_007175386.1|	-	1.1e-07	31.7	0.6	1.8e-07	31.0	0.2	1.6	2	0	0	2	2	2	1	Peptidase	S24-like
VSP	PF03302.13	gi|429217396|ref|YP_007175386.1|	-	0.32	9.8	0.1	0.42	9.4	0.1	1.1	1	0	0	1	1	1	0	Giardia	variant-specific	surface	protein
Ribonuc_red_lgC	PF02867.15	gi|429217397|ref|YP_007175387.1|	-	1.1e-127	426.8	0.1	5.2e-92	309.1	0.0	3.3	2	1	0	2	2	2	2	Ribonucleotide	reductase,	barrel	domain
Ribonuc_red_lgN	PF00317.21	gi|429217397|ref|YP_007175387.1|	-	5.3e-14	52.0	0.3	1.2e-13	50.9	0.3	1.7	1	0	0	1	1	1	1	Ribonucleotide	reductase,	all-alpha	domain
Spore_III_AB	PF09548.10	gi|429217397|ref|YP_007175387.1|	-	0.14	12.3	1.9	2.7	8.1	0.0	3.4	4	0	0	4	4	4	0	Stage	III	sporulation	protein	AB	(spore_III_AB)
RecR	PF02132.15	gi|429217398|ref|YP_007175388.1|	-	4.2e-06	26.2	0.5	4.2e-06	26.2	0.5	2.8	3	0	0	3	3	3	1	RecR	protein
TF_Zn_Ribbon	PF08271.12	gi|429217398|ref|YP_007175388.1|	-	0.00079	18.9	1.6	0.0013	18.2	0.1	2.0	2	0	0	2	2	2	1	TFIIB	zinc-binding
ArfGap	PF01412.18	gi|429217398|ref|YP_007175388.1|	-	0.017	15.2	0.1	0.032	14.3	0.1	1.5	1	0	0	1	1	1	0	Putative	GTPase	activating	protein	for	Arf
Atg14	PF10186.9	gi|429217398|ref|YP_007175388.1|	-	1.5	7.9	6.8	0.13	11.3	0.7	1.9	2	0	0	2	2	2	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
zf-C4pol	PF14260.6	gi|429217398|ref|YP_007175388.1|	-	8.1	7.0	9.7	6.6	7.3	1.3	2.4	2	0	0	2	2	2	0	C4-type	zinc-finger	of	DNA	polymerase	delta
CEBP_ZZ	PF16366.5	gi|429217398|ref|YP_007175388.1|	-	9.7	6.5	9.2	0.52	10.6	1.0	2.5	2	1	0	2	2	2	0	Cytoplasmic	polyadenylation	element-binding	protein	ZZ	domain
TF_Zn_Ribbon	PF08271.12	gi|429217399|ref|YP_007175389.1|	-	0.031	13.8	4.2	0.11	12.0	4.2	2.0	1	1	0	1	1	1	0	TFIIB	zinc-binding
MFS_1	PF07690.16	gi|429217400|ref|YP_007175390.1|	-	8.7e-07	28.2	34.4	8.7e-07	28.2	34.4	1.8	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
CcmD	PF04995.14	gi|429217400|ref|YP_007175390.1|	-	0.7	10.0	2.7	2.5	8.3	2.7	1.9	1	0	0	1	1	1	0	Heme	exporter	protein	D	(CcmD)
DEAD	PF00270.29	gi|429217401|ref|YP_007175391.1|	-	7.2e-39	133.3	0.0	2.9e-36	124.9	0.0	2.6	2	0	0	2	2	2	2	DEAD/DEAH	box	helicase
Helicase_C	PF00271.31	gi|429217401|ref|YP_007175391.1|	-	4.3e-22	78.6	0.2	1.7e-19	70.2	0.2	3.3	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
DEAD_assoc	PF08494.11	gi|429217401|ref|YP_007175391.1|	-	2.7e-11	43.6	0.0	6.8e-11	42.3	0.0	1.7	1	1	0	1	1	1	1	DEAD/H	associated
ResIII	PF04851.15	gi|429217401|ref|YP_007175391.1|	-	4.9e-10	39.7	0.1	5.3e-08	33.1	0.0	2.7	3	0	0	3	3	3	1	Type	III	restriction	enzyme,	res	subunit
AAA_19	PF13245.6	gi|429217401|ref|YP_007175391.1|	-	0.0053	17.1	0.0	0.59	10.5	0.0	2.7	2	0	0	2	2	2	1	AAA	domain
CRISPR_Cas2	PF09827.9	gi|429217401|ref|YP_007175391.1|	-	0.0059	16.8	1.6	0.027	14.6	0.1	2.9	2	1	0	2	2	2	1	CRISPR	associated	protein	Cas2
DUF4379	PF14311.6	gi|429217401|ref|YP_007175391.1|	-	0.0065	16.8	0.5	0.017	15.5	0.5	1.7	1	0	0	1	1	1	1	Probable	Zinc-ribbon	domain
HypA	PF01155.19	gi|429217401|ref|YP_007175391.1|	-	0.012	15.6	0.2	0.063	13.3	0.1	2.2	2	0	0	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
UPF0515	PF15135.6	gi|429217401|ref|YP_007175391.1|	-	0.018	14.4	0.0	0.035	13.5	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	protein	UPF0515
DZR	PF12773.7	gi|429217401|ref|YP_007175391.1|	-	0.036	14.1	0.5	0.06	13.4	0.5	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
Peptidase_C8	PF03569.13	gi|429217401|ref|YP_007175391.1|	-	0.11	12.1	0.3	0.53	9.8	0.1	2.2	3	0	0	3	3	3	0	Peptidase	family	C8
zf-3CxxC_2	PF17180.4	gi|429217401|ref|YP_007175391.1|	-	0.31	11.8	0.9	0.63	10.8	0.9	1.4	1	0	0	1	1	1	0	Zinc-binding	domain
Cpn60_TCP1	PF00118.24	gi|429217402|ref|YP_007175392.1|	-	4e-179	596.3	18.3	4.6e-179	596.1	18.3	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
DUF2277	PF10041.9	gi|429217402|ref|YP_007175392.1|	-	0.1	12.9	0.0	0.42	11.0	0.0	2.1	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2277)
SH3_15	PF18346.1	gi|429217402|ref|YP_007175392.1|	-	0.14	12.5	0.0	0.35	11.2	0.0	1.7	1	1	0	1	1	1	0	Mind	bomb	SH3	repeat	domain
Phage_terminase	PF10668.9	gi|429217403|ref|YP_007175393.1|	-	0.1	12.6	0.6	4.4	7.4	0.2	2.5	2	0	0	2	2	2	0	Phage	terminase	small	subunit
MFS_1	PF07690.16	gi|429217404|ref|YP_007175394.1|	-	5.2e-27	94.7	40.3	5.2e-27	94.7	40.3	1.7	1	1	0	1	1	1	1	Major	Facilitator	Superfamily
DUF5316	PF17247.2	gi|429217404|ref|YP_007175394.1|	-	0.0031	17.5	1.7	0.0031	17.5	1.7	3.7	6	0	0	6	6	6	1	Family	of	unknown	function	(DUF5316)
Toxin_GhoT_OrtT	PF10753.9	gi|429217404|ref|YP_007175394.1|	-	0.061	13.6	0.7	0.061	13.6	0.7	3.7	2	0	0	2	2	2	0	Toxin	GhoT_OrtT
HxlR	PF01638.17	gi|429217406|ref|YP_007175396.1|	-	7.1e-23	80.3	0.1	8.6e-23	80.0	0.1	1.1	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
PadR	PF03551.14	gi|429217406|ref|YP_007175396.1|	-	1.7e-05	24.6	0.0	4.2e-05	23.4	0.0	1.7	1	1	1	2	2	2	1	Transcriptional	regulator	PadR-like	family
HTH_34	PF13601.6	gi|429217406|ref|YP_007175396.1|	-	2.9e-05	24.1	0.0	4.1e-05	23.7	0.0	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
DUF505	PF04458.12	gi|429217406|ref|YP_007175396.1|	-	0.0077	14.7	0.0	0.0084	14.5	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF505)
DUF3116	PF11313.8	gi|429217406|ref|YP_007175396.1|	-	0.02	14.7	0.0	0.033	14.0	0.0	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3116)
HTH_45	PF14947.6	gi|429217406|ref|YP_007175396.1|	-	0.021	14.8	0.0	0.035	14.1	0.0	1.3	1	0	0	1	1	1	0	Winged	helix-turn-helix
MarR	PF01047.22	gi|429217406|ref|YP_007175396.1|	-	0.033	14.1	0.0	0.073	13.0	0.0	1.7	1	0	0	1	1	1	0	MarR	family
B-block_TFIIIC	PF04182.12	gi|429217406|ref|YP_007175396.1|	-	0.058	13.6	0.1	0.1	12.8	0.1	1.5	1	1	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
DoxX	PF07681.12	gi|429217407|ref|YP_007175397.1|	-	3.2e-17	62.9	6.9	4.9e-17	62.3	6.9	1.3	1	0	0	1	1	1	1	DoxX
DoxX_2	PF13564.6	gi|429217407|ref|YP_007175397.1|	-	9.1e-06	25.7	3.5	1.1e-05	25.4	3.1	1.4	1	1	0	1	1	1	1	DoxX-like	family
DoxD	PF04173.13	gi|429217407|ref|YP_007175397.1|	-	0.00019	21.4	6.8	0.00019	21.4	6.8	1.9	2	1	0	2	2	2	1	TQO	small	subunit	DoxD
VKG_Carbox	PF05090.14	gi|429217407|ref|YP_007175397.1|	-	0.007	15.3	1.3	0.0083	15.0	1.3	1.1	1	0	0	1	1	1	1	Vitamin	K-dependent	gamma-carboxylase
DoxX_3	PF13781.6	gi|429217407|ref|YP_007175397.1|	-	0.57	10.9	7.3	0.093	13.4	3.8	1.6	2	0	0	2	2	2	0	DoxX-like	family
Peptidase_M24	PF00557.24	gi|429217408|ref|YP_007175398.1|	-	1.4e-36	126.1	0.0	1.9e-36	125.7	0.0	1.2	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.18	gi|429217408|ref|YP_007175398.1|	-	1.4e-08	35.4	0.0	3e-08	34.4	0.0	1.5	1	0	0	1	1	1	1	Creatinase/Prolidase	N-terminal	domain
Methyltransf_11	PF08241.12	gi|429217409|ref|YP_007175399.1|	-	5.5e-17	62.2	0.0	8.6e-17	61.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|429217409|ref|YP_007175399.1|	-	7.7e-17	61.5	0.0	8.9e-17	61.3	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|429217409|ref|YP_007175399.1|	-	7.2e-16	58.7	0.0	1.2e-15	58.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|429217409|ref|YP_007175399.1|	-	1.2e-12	47.7	0.1	1.5e-12	47.4	0.1	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
MTS	PF05175.14	gi|429217409|ref|YP_007175399.1|	-	7.6e-09	35.3	0.0	9.5e-09	35.0	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	small	domain
Met_10	PF02475.16	gi|429217409|ref|YP_007175399.1|	-	7.4e-08	32.4	0.3	9.5e-08	32.0	0.3	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_12	PF08242.12	gi|429217409|ref|YP_007175399.1|	-	8.3e-08	32.9	0.0	1.8e-07	31.8	0.0	1.5	2	0	0	2	2	1	1	Methyltransferase	domain
PCMT	PF01135.19	gi|429217409|ref|YP_007175399.1|	-	2e-07	31.0	0.0	2.9e-07	30.5	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
TehB	PF03848.14	gi|429217409|ref|YP_007175399.1|	-	6e-07	29.1	0.3	7.2e-07	28.8	0.3	1.0	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
Fibrillarin	PF01269.17	gi|429217409|ref|YP_007175399.1|	-	1.2e-06	27.8	0.1	1.6e-06	27.4	0.1	1.2	1	0	0	1	1	1	1	Fibrillarin
RrnaAD	PF00398.20	gi|429217409|ref|YP_007175399.1|	-	1.3e-06	27.7	0.1	1.8e-06	27.2	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_2	PF00891.18	gi|429217409|ref|YP_007175399.1|	-	1.8e-06	27.4	0.0	2.4e-06	27.0	0.0	1.2	1	0	0	1	1	1	1	O-methyltransferase	domain
Methyltransf_8	PF05148.15	gi|429217409|ref|YP_007175399.1|	-	1.7e-05	24.8	0.0	0.0001	22.2	0.0	1.9	1	1	0	1	1	1	1	Hypothetical	methyltransferase
PrmA	PF06325.13	gi|429217409|ref|YP_007175399.1|	-	5.6e-05	22.7	0.6	7.4e-05	22.3	0.6	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_4	PF02390.17	gi|429217409|ref|YP_007175399.1|	-	5.8e-05	22.6	0.1	9.2e-05	22.0	0.1	1.3	1	0	0	1	1	1	1	Putative	methyltransferase
Methyltr_RsmB-F	PF01189.17	gi|429217409|ref|YP_007175399.1|	-	8e-05	22.4	0.0	0.00012	21.8	0.0	1.2	1	0	0	1	1	1	1	16S	rRNA	methyltransferase	RsmB/F
DOT1	PF08123.13	gi|429217409|ref|YP_007175399.1|	-	8.5e-05	22.2	0.0	0.00011	21.8	0.0	1.2	1	0	0	1	1	1	1	Histone	methylation	protein	DOT1
GidB	PF02527.15	gi|429217409|ref|YP_007175399.1|	-	0.00015	21.2	0.2	0.00024	20.5	0.2	1.3	1	1	0	1	1	1	1	rRNA	small	subunit	methyltransferase	G
Methyltransf_18	PF12847.7	gi|429217409|ref|YP_007175399.1|	-	0.00023	21.1	0.5	0.00039	20.4	0.2	1.5	2	0	0	2	2	1	1	Methyltransferase	domain
tRNA_U5-meth_tr	PF05958.11	gi|429217409|ref|YP_007175399.1|	-	0.00063	18.8	0.0	0.0011	18.0	0.0	1.4	1	0	0	1	1	1	1	tRNA	(Uracil-5-)-methyltransferase
Methyltransf_16	PF10294.9	gi|429217409|ref|YP_007175399.1|	-	0.00063	19.5	0.0	0.00079	19.2	0.0	1.1	1	0	0	1	1	1	1	Lysine	methyltransferase
CMAS	PF02353.20	gi|429217409|ref|YP_007175399.1|	-	0.00067	19.0	0.1	0.00093	18.6	0.1	1.2	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
FtsJ	PF01728.19	gi|429217409|ref|YP_007175399.1|	-	0.001	19.2	0.0	0.0012	18.9	0.0	1.2	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
Methyltransf_23	PF13489.6	gi|429217409|ref|YP_007175399.1|	-	0.0029	17.5	0.0	0.0038	17.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.10	gi|429217409|ref|YP_007175399.1|	-	0.005	16.4	0.1	0.0066	16.0	0.1	1.2	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
GCD14	PF08704.10	gi|429217409|ref|YP_007175399.1|	-	0.017	14.8	0.0	0.02	14.6	0.0	1.2	1	0	0	1	1	1	0	tRNA	methyltransferase	complex	GCD14	subunit
DUF3627	PF12299.8	gi|429217409|ref|YP_007175399.1|	-	0.032	14.3	3.0	0.056	13.5	3.0	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3627)
DUF938	PF06080.12	gi|429217409|ref|YP_007175399.1|	-	0.046	13.5	0.0	0.078	12.7	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF938)
ADH_zinc_N	PF00107.26	gi|429217409|ref|YP_007175399.1|	-	0.1	12.6	0.0	0.14	12.2	0.0	1.4	1	0	0	1	1	1	0	Zinc-binding	dehydrogenase
Cons_hypoth95	PF03602.15	gi|429217409|ref|YP_007175399.1|	-	0.13	11.9	0.0	0.17	11.5	0.0	1.2	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
TMEM154	PF15102.6	gi|429217410|ref|YP_007175400.1|	-	0.033	14.1	6.5	0.078	12.9	6.5	1.6	1	0	0	1	1	1	0	TMEM154	protein	family
Stevor	PF17410.2	gi|429217410|ref|YP_007175400.1|	-	0.045	13.3	4.3	0.055	13.0	4.3	1.3	1	1	0	1	1	1	0	Subtelomeric	Variable	Open	Reading	frame
Peptidase_C23	PF05379.11	gi|429217410|ref|YP_007175400.1|	-	0.069	13.3	0.4	1.6	8.9	0.0	2.3	2	0	0	2	2	2	0	Carlavirus	endopeptidase
RIFIN	PF02009.16	gi|429217410|ref|YP_007175400.1|	-	0.65	9.8	2.9	0.65	9.8	2.9	1.2	1	0	0	1	1	1	0	Rifin
DUF3671	PF12420.8	gi|429217410|ref|YP_007175400.1|	-	8.2	6.5	10.1	2.6	8.2	1.4	2.5	2	2	0	2	2	2	0	Protein	of	unknown	function
TPR_2	PF07719.17	gi|429217411|ref|YP_007175401.1|	-	0.00056	19.8	1.8	0.0061	16.6	1.4	2.6	2	0	0	2	2	2	1	Tetratricopeptide	repeat
YfdX	PF10938.8	gi|429217411|ref|YP_007175401.1|	-	0.014	15.3	0.1	0.064	13.2	0.0	2.0	2	0	0	2	2	2	0	YfdX	protein
TPR_6	PF13174.6	gi|429217411|ref|YP_007175401.1|	-	0.017	15.8	2.1	0.091	13.4	1.1	2.7	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|429217411|ref|YP_007175401.1|	-	0.049	13.9	1.1	0.091	13.1	0.1	1.9	2	0	0	2	2	2	0	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|429217411|ref|YP_007175401.1|	-	0.056	13.7	0.2	0.2	11.9	0.2	2.0	1	0	0	1	1	1	0	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_1	PF00515.28	gi|429217411|ref|YP_007175401.1|	-	0.073	12.9	2.8	0.12	12.3	1.5	2.1	2	0	0	2	2	2	0	Tetratricopeptide	repeat
Fis1_TPR_C	PF14853.6	gi|429217411|ref|YP_007175401.1|	-	0.18	11.9	1.7	0.5	10.5	1.7	1.8	1	0	0	1	1	1	0	Fis1	C-terminal	tetratricopeptide	repeat
TPR_8	PF13181.6	gi|429217411|ref|YP_007175401.1|	-	0.73	10.2	3.9	1	9.7	1.8	2.4	2	0	0	2	2	2	0	Tetratricopeptide	repeat
Fusion_gly_K	PF01621.17	gi|429217412|ref|YP_007175402.1|	-	0.019	14.0	3.0	0.024	13.7	3.0	1.2	1	0	0	1	1	1	0	Cell	fusion	glycoprotein	K
DUF2122	PF09895.9	gi|429217413|ref|YP_007175403.1|	-	4.4e-37	126.7	0.1	5.6e-37	126.4	0.1	1.1	1	0	0	1	1	1	1	RecB-family	nuclease	(DUF2122)
Orf78	PF06024.12	gi|429217414|ref|YP_007175404.1|	-	0.016	15.5	1.5	0.03	14.6	1.5	1.4	1	0	0	1	1	1	0	Orf78	(ac78)
SNARE	PF05739.19	gi|429217414|ref|YP_007175404.1|	-	0.018	15.1	1.2	0.031	14.3	1.2	1.3	1	0	0	1	1	1	0	SNARE	domain
DUF4366	PF14283.6	gi|429217414|ref|YP_007175404.1|	-	0.12	12.4	0.0	0.2	11.7	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4366)
tRNA-synt_2b	PF00587.25	gi|429217415|ref|YP_007175405.1|	-	2.4e-35	122.1	0.2	4.9e-35	121.1	0.2	1.5	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.20	gi|429217415|ref|YP_007175405.1|	-	1e-07	32.0	0.9	2.7e-07	30.6	0.9	1.7	1	0	0	1	1	1	1	Anticodon	binding	domain
tRNA-synt_1	PF00133.22	gi|429217418|ref|YP_007175408.1|	-	1.3e-113	380.4	0.5	4.5e-112	375.3	0.5	2.1	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1g	PF09334.11	gi|429217418|ref|YP_007175408.1|	-	3.9e-27	95.0	3.4	5.1e-15	55.1	0.0	4.2	3	1	0	3	3	3	3	tRNA	synthetases	class	I	(M)
Anticodon_1	PF08264.13	gi|429217418|ref|YP_007175408.1|	-	3.4e-20	72.5	5.6	3.4e-20	72.5	5.6	2.1	2	0	0	2	2	2	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1_2	PF13603.6	gi|429217418|ref|YP_007175408.1|	-	3e-06	26.9	0.0	0.0017	17.9	0.0	3.1	1	1	1	2	2	2	2	Leucyl-tRNA	synthetase,	Domain	2
DZR	PF12773.7	gi|429217418|ref|YP_007175408.1|	-	0.017	15.1	0.6	22	5.2	0.1	3.2	2	1	0	2	2	2	0	Double	zinc	ribbon
zf-TFIIB	PF13453.6	gi|429217418|ref|YP_007175408.1|	-	0.14	11.6	6.9	11	5.4	0.0	4.2	3	1	2	5	5	5	0	Transcription	factor	zinc-finger
HalOD2	PF18547.1	gi|429217418|ref|YP_007175408.1|	-	0.2	11.6	0.3	4.7	7.2	0.0	2.7	2	0	0	2	2	2	0	Halobacterial	output	domain	2
DNA_ligase_ZBD	PF03119.16	gi|429217418|ref|YP_007175408.1|	-	0.67	10.0	6.8	18	5.4	0.4	3.6	3	0	0	3	3	3	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-IS66	PF13005.7	gi|429217418|ref|YP_007175408.1|	-	1.3	9.5	3.7	25	5.4	0.1	3.3	3	0	0	3	3	3	0	zinc-finger	binding	domain	of	transposase	IS66
zf-FPG_IleRS	PF06827.14	gi|429217418|ref|YP_007175408.1|	-	7.1	6.6	9.0	4.9	7.1	0.1	3.0	3	0	0	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
Pyr_redox_2	PF07992.14	gi|429217419|ref|YP_007175409.1|	-	7.7e-67	225.6	0.0	9.8e-67	225.2	0.0	1.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|429217419|ref|YP_007175409.1|	-	9.8e-26	90.1	0.8	2.2e-21	76.2	0.0	3.0	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.22	gi|429217419|ref|YP_007175409.1|	-	1.2e-23	83.4	0.0	3.2e-23	82.1	0.0	1.8	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox_3	PF13738.6	gi|429217419|ref|YP_007175409.1|	-	1.8e-19	70.1	0.4	4.5e-19	68.8	0.4	1.6	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.22	gi|429217419|ref|YP_007175409.1|	-	6.8e-16	58.3	0.3	1.3e-07	31.1	0.3	4.1	3	1	1	4	4	4	3	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.14	gi|429217419|ref|YP_007175409.1|	-	2e-14	53.1	2.2	1.2e-06	27.5	0.1	4.1	3	1	1	4	4	4	3	HI0933-like	protein
FAD_oxidored	PF12831.7	gi|429217419|ref|YP_007175409.1|	-	6.5e-10	38.9	0.0	6.6e-09	35.6	0.0	2.3	3	0	0	3	3	3	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.6	gi|429217419|ref|YP_007175409.1|	-	2e-08	34.4	0.3	0.00025	21.2	0.1	2.6	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.24	gi|429217419|ref|YP_007175409.1|	-	6.6e-08	32.0	0.0	1.4e-06	27.7	0.0	2.6	3	0	0	3	3	3	1	FAD	binding	domain
DAO	PF01266.24	gi|429217419|ref|YP_007175409.1|	-	3.9e-07	30.0	0.2	0.0064	16.1	0.1	3.5	3	1	1	4	4	4	2	FAD	dependent	oxidoreductase
AlaDh_PNT_C	PF01262.21	gi|429217419|ref|YP_007175409.1|	-	5.5e-07	29.1	0.0	0.036	13.4	0.0	2.5	2	0	0	2	2	2	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
Lycopene_cycl	PF05834.12	gi|429217419|ref|YP_007175409.1|	-	2.5e-06	26.8	0.3	0.0081	15.2	0.1	2.3	2	0	0	2	2	2	2	Lycopene	cyclase	protein
K_oxygenase	PF13434.6	gi|429217419|ref|YP_007175409.1|	-	2.7e-06	26.8	0.0	0.0026	16.9	0.0	3.2	2	1	0	3	3	3	1	L-lysine	6-monooxygenase	(NADPH-requiring)
Thi4	PF01946.17	gi|429217419|ref|YP_007175409.1|	-	0.00012	21.4	0.2	0.018	14.3	0.0	2.7	3	0	0	3	3	3	1	Thi4	family
NAD_binding_7	PF13241.6	gi|429217419|ref|YP_007175409.1|	-	0.00069	20.0	0.0	0.22	12.0	0.0	2.5	2	0	0	2	2	2	1	Putative	NAD(P)-binding
3HCDH_N	PF02737.18	gi|429217419|ref|YP_007175409.1|	-	0.001	19.0	0.0	0.055	13.4	0.0	2.5	2	1	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
UDPG_MGDP_dh_N	PF03721.14	gi|429217419|ref|YP_007175409.1|	-	0.0011	18.6	0.1	0.047	13.3	0.0	2.6	2	1	0	2	2	2	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
XdhC_C	PF13478.6	gi|429217419|ref|YP_007175409.1|	-	0.0013	19.3	0.0	1.5	9.3	0.0	2.9	3	0	0	3	3	3	1	XdhC	Rossmann	domain
FAD_binding_3	PF01494.19	gi|429217419|ref|YP_007175409.1|	-	0.0015	17.9	0.1	0.045	13.0	0.1	2.2	2	0	0	2	2	2	1	FAD	binding	domain
Trp_halogenase	PF04820.14	gi|429217419|ref|YP_007175409.1|	-	0.0061	15.5	0.1	0.042	12.7	0.0	2.1	2	0	0	2	2	2	1	Tryptophan	halogenase
TrkA_N	PF02254.18	gi|429217419|ref|YP_007175409.1|	-	0.012	15.9	0.0	0.6	10.4	0.0	2.7	2	0	0	2	2	2	0	TrkA-N	domain
2-Hacid_dh_C	PF02826.19	gi|429217419|ref|YP_007175409.1|	-	0.043	13.2	0.1	0.75	9.1	0.0	2.5	3	0	0	3	3	3	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_9	PF13454.6	gi|429217419|ref|YP_007175409.1|	-	0.19	11.7	0.0	7	6.6	0.0	3.0	4	0	0	4	4	3	0	FAD-NAD(P)-binding
Ldh_1_N	PF00056.23	gi|429217420|ref|YP_007175410.1|	-	2.2e-38	131.5	0.6	3.1e-38	131.0	0.6	1.2	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	NAD	binding	domain
Ldh_1_C	PF02866.18	gi|429217420|ref|YP_007175410.1|	-	2e-20	73.4	0.0	3.2e-20	72.7	0.0	1.2	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	alpha/beta	C-terminal	domain
Glyco_hydro_4	PF02056.16	gi|429217420|ref|YP_007175410.1|	-	2.7e-05	23.8	0.0	6.8e-05	22.5	0.0	1.7	2	0	0	2	2	2	1	Family	4	glycosyl	hydrolase
Epimerase	PF01370.21	gi|429217420|ref|YP_007175410.1|	-	0.069	12.6	0.0	0.11	11.9	0.0	1.4	1	0	0	1	1	1	0	NAD	dependent	epimerase/dehydratase	family
FUR	PF01475.19	gi|429217421|ref|YP_007175411.1|	-	7.5e-19	68.0	0.8	9.6e-19	67.7	0.8	1.1	1	0	0	1	1	1	1	Ferric	uptake	regulator	family
ArlS_N	PF18719.1	gi|429217421|ref|YP_007175411.1|	-	0.003	17.8	2.7	0.0036	17.5	1.1	1.9	1	1	0	2	2	2	1	ArlS	sensor	domain
DUF2703	PF10865.8	gi|429217421|ref|YP_007175411.1|	-	0.021	15.0	0.4	2	8.6	0.0	2.7	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF2703)
HVSL	PF09749.9	gi|429217421|ref|YP_007175411.1|	-	0.11	12.0	0.0	0.12	11.8	0.0	1.2	1	0	0	1	1	1	0	Uncharacterised	conserved	protein
4HBT	PF03061.22	gi|429217422|ref|YP_007175412.1|	-	9.4e-19	67.6	0.1	5.8e-11	42.6	0.1	2.3	2	0	0	2	2	2	2	Thioesterase	superfamily
MaoC_dehydratas	PF01575.19	gi|429217422|ref|YP_007175412.1|	-	0.0046	16.5	0.0	1.8	8.1	0.0	2.5	2	0	0	2	2	2	2	MaoC	like	domain
4HBT_2	PF13279.6	gi|429217422|ref|YP_007175412.1|	-	0.077	13.5	0.0	0.18	12.3	0.0	1.6	1	0	0	1	1	1	0	Thioesterase-like	superfamily
DUF874	PF05917.11	gi|429217422|ref|YP_007175412.1|	-	0.16	11.0	1.5	0.25	10.3	0.3	1.8	2	0	0	2	2	2	0	Helicobacter	pylori	protein	of	unknown	function	(DUF874)
TGT	PF01702.18	gi|429217423|ref|YP_007175413.1|	-	2.7e-75	253.7	0.0	3.5e-75	253.3	0.0	1.1	1	0	0	1	1	1	1	Queuine	tRNA-ribosyltransferase
DUF5591	PF17884.1	gi|429217423|ref|YP_007175413.1|	-	0.011	15.6	0.3	0.055	13.3	0.2	2.3	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF5591)
DUF2654	PF10849.8	gi|429217423|ref|YP_007175413.1|	-	0.17	12.1	1.7	8.9	6.6	0.0	3.0	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2654)
Lsm_C	PF14894.6	gi|429217424|ref|YP_007175414.1|	-	1.4e-27	95.2	0.5	2.1e-27	94.7	0.5	1.3	1	0	0	1	1	1	1	Lsm	C-terminal
LSM	PF01423.22	gi|429217424|ref|YP_007175414.1|	-	1.2e-06	28.1	0.1	2.1e-06	27.3	0.1	1.5	1	1	0	1	1	1	1	LSM	domain
Hfq	PF17209.3	gi|429217424|ref|YP_007175414.1|	-	0.00053	19.6	0.0	0.0011	18.6	0.0	1.4	1	0	0	1	1	1	1	Hfq	protein
SM-ATX	PF14438.6	gi|429217424|ref|YP_007175414.1|	-	0.0019	18.3	0.0	0.0027	17.8	0.0	1.4	1	0	0	1	1	1	1	Ataxin	2	SM	domain
RL	PF17797.1	gi|429217424|ref|YP_007175414.1|	-	0.082	12.9	0.0	0.13	12.2	0.0	1.3	1	0	0	1	1	1	0	RL	domain
4HBT_2	PF13279.6	gi|429217425|ref|YP_007175415.1|	-	3.4e-09	37.2	0.0	3.9e-09	37.0	0.0	1.0	1	0	0	1	1	1	1	Thioesterase-like	superfamily
4HBT	PF03061.22	gi|429217425|ref|YP_007175415.1|	-	5.5e-07	29.8	0.0	1.9e-06	28.1	0.0	1.7	2	0	0	2	2	2	1	Thioesterase	superfamily
EF-hand_4	PF12763.7	gi|429217425|ref|YP_007175415.1|	-	0.099	12.6	0.0	0.17	11.9	0.0	1.3	1	0	0	1	1	1	0	Cytoskeletal-regulatory	complex	EF	hand
RPA_C	PF08784.11	gi|429217426|ref|YP_007175416.1|	-	0.024	15.3	0.2	0.049	14.3	0.2	1.5	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
Pilin_N	PF07790.11	gi|429217427|ref|YP_007175417.1|	-	0.00022	22.1	0.8	0.0009	20.1	1.1	1.8	2	0	0	2	2	2	1	Archaeal	Type	IV	pilin,	N-terminal
UXS1_N	PF11803.8	gi|429217427|ref|YP_007175417.1|	-	0.0033	17.8	0.8	0.026	14.9	0.4	2.2	2	0	0	2	2	2	1	UDP-glucuronate	decarboxylase	N-terminal
T2SSF	PF00482.23	gi|429217428|ref|YP_007175418.1|	-	0.00047	20.1	0.5	0.00047	20.1	0.5	2.6	3	0	0	3	3	3	1	Type	II	secretion	system	(T2SS),	protein	F
T2SSF	PF00482.23	gi|429217429|ref|YP_007175419.1|	-	2.5e-06	27.5	0.2	2.5e-06	27.5	0.2	2.6	3	0	0	3	3	3	1	Type	II	secretion	system	(T2SS),	protein	F
PsbW	PF07123.12	gi|429217429|ref|YP_007175419.1|	-	0.099	12.7	3.3	0.4	10.7	0.3	2.4	2	0	0	2	2	2	0	Photosystem	II	reaction	centre	W	protein	(PsbW)
Thiolase_N	PF00108.23	gi|429217430|ref|YP_007175420.1|	-	2.3e-74	250.0	0.0	2.8e-74	249.8	0.0	1.1	1	0	0	1	1	1	1	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.18	gi|429217430|ref|YP_007175420.1|	-	3.4e-40	136.5	0.1	2.9e-39	133.5	0.1	2.1	2	0	0	2	2	2	1	Thiolase,	C-terminal	domain
ketoacyl-synt	PF00109.26	gi|429217430|ref|YP_007175420.1|	-	0.0033	17.0	0.1	0.0066	16.0	0.1	1.4	1	0	0	1	1	1	1	Beta-ketoacyl	synthase,	N-terminal	domain
ACP_syn_III	PF08545.10	gi|429217430|ref|YP_007175420.1|	-	0.09	12.6	1.0	0.63	9.9	0.6	2.2	2	0	0	2	2	2	0	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Meth_synt_1	PF08267.12	gi|429217431|ref|YP_007175421.1|	-	1.3e-20	74.2	0.0	1.8e-20	73.7	0.0	1.2	1	0	0	1	1	1	1	Cobalamin-independent	synthase,	N-terminal	domain
Meth_synt_2	PF01717.18	gi|429217431|ref|YP_007175421.1|	-	2.2e-09	37.1	0.0	5.3e-09	35.8	0.0	1.6	1	1	0	1	1	1	1	Cobalamin-independent	synthase,	Catalytic	domain
ATP13	PF12921.7	gi|429217431|ref|YP_007175421.1|	-	0.046	13.6	0.0	0.17	11.7	0.0	1.9	2	0	0	2	2	2	0	Mitochondrial	ATPase	expression
Meth_synt_2	PF01717.18	gi|429217432|ref|YP_007175422.1|	-	1e-65	222.2	0.0	1.2e-65	221.9	0.0	1.1	1	0	0	1	1	1	1	Cobalamin-independent	synthase,	Catalytic	domain
Meth_synt_1	PF08267.12	gi|429217432|ref|YP_007175422.1|	-	4.4e-15	56.0	0.2	2.8e-11	43.5	0.0	2.1	2	0	0	2	2	2	2	Cobalamin-independent	synthase,	N-terminal	domain
MinE	PF03776.14	gi|429217432|ref|YP_007175422.1|	-	0.0012	18.8	2.5	0.52	10.3	0.2	2.8	3	0	0	3	3	3	2	Septum	formation	topological	specificity	factor	MinE
UPF0183	PF03676.14	gi|429217432|ref|YP_007175422.1|	-	0.13	11.6	0.1	0.35	10.1	0.0	1.6	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0183)
AIRS_C	PF02769.22	gi|429217433|ref|YP_007175423.1|	-	3.5e-18	66.2	0.0	5.4e-18	65.6	0.0	1.2	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.24	gi|429217433|ref|YP_007175423.1|	-	2.1e-11	44.3	0.0	3.3e-11	43.7	0.0	1.3	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
Mur_ligase	PF01225.25	gi|429217433|ref|YP_007175423.1|	-	0.13	12.6	0.2	2.4	8.5	0.0	2.8	3	0	0	3	3	3	0	Mur	ligase	family,	catalytic	domain
Biotin_lipoyl_2	PF13533.6	gi|429217433|ref|YP_007175423.1|	-	0.16	11.8	0.1	23	4.9	0.0	2.4	2	0	0	2	2	2	0	Biotin-lipoyl	like
AAA_18	PF13238.6	gi|429217434|ref|YP_007175424.1|	-	8.2e-21	74.9	0.1	1.3e-20	74.2	0.1	1.3	1	0	0	1	1	1	1	AAA	domain
SKI	PF01202.22	gi|429217434|ref|YP_007175424.1|	-	5.8e-07	29.8	0.0	8.7e-07	29.2	0.0	1.3	1	0	0	1	1	1	1	Shikimate	kinase
AAA_17	PF13207.6	gi|429217434|ref|YP_007175424.1|	-	8.3e-07	29.5	0.1	3.4e-06	27.5	0.0	1.9	1	1	1	2	2	2	1	AAA	domain
AAA	PF00004.29	gi|429217434|ref|YP_007175424.1|	-	2.3e-06	28.1	0.1	1.2e-05	25.8	0.0	2.0	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
NTPase_1	PF03266.15	gi|429217434|ref|YP_007175424.1|	-	0.00019	21.4	0.0	0.00029	20.8	0.0	1.4	1	0	0	1	1	1	1	NTPase
AAA_22	PF13401.6	gi|429217434|ref|YP_007175424.1|	-	0.00036	20.8	0.0	0.00085	19.6	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
Thymidylate_kin	PF02223.17	gi|429217434|ref|YP_007175424.1|	-	0.00055	19.7	0.1	0.61	9.7	0.0	2.2	2	0	0	2	2	2	2	Thymidylate	kinase
RuvB_N	PF05496.12	gi|429217434|ref|YP_007175424.1|	-	0.00055	19.7	0.0	0.00095	18.9	0.0	1.3	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_5	PF07728.14	gi|429217434|ref|YP_007175424.1|	-	0.0011	19.0	0.0	0.0017	18.3	0.0	1.7	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
dNK	PF01712.19	gi|429217434|ref|YP_007175424.1|	-	0.0011	18.9	0.7	0.12	12.2	0.0	2.2	1	1	0	2	2	2	1	Deoxynucleoside	kinase
AAA_28	PF13521.6	gi|429217434|ref|YP_007175424.1|	-	0.0011	19.2	0.1	0.0025	18.1	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
ABC_tran	PF00005.27	gi|429217434|ref|YP_007175424.1|	-	0.0013	19.3	0.0	0.0019	18.7	0.0	1.5	1	1	0	1	1	1	1	ABC	transporter
Zeta_toxin	PF06414.12	gi|429217434|ref|YP_007175424.1|	-	0.0015	17.9	0.0	0.0032	16.8	0.0	1.5	1	0	0	1	1	1	1	Zeta	toxin
RNA_helicase	PF00910.22	gi|429217434|ref|YP_007175424.1|	-	0.0021	18.4	0.0	0.016	15.6	0.0	2.1	2	0	0	2	2	2	1	RNA	helicase
AAA_33	PF13671.6	gi|429217434|ref|YP_007175424.1|	-	0.0024	18.0	0.0	0.0063	16.7	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.6	gi|429217434|ref|YP_007175424.1|	-	0.0035	17.8	0.0	0.0045	17.4	0.0	1.4	1	0	0	1	1	1	1	AAA	ATPase	domain
Cytidylate_kin	PF02224.18	gi|429217434|ref|YP_007175424.1|	-	0.0035	17.1	0.0	0.0072	16.1	0.0	1.6	2	0	0	2	2	2	1	Cytidylate	kinase
ATPase	PF06745.13	gi|429217434|ref|YP_007175424.1|	-	0.01	15.2	0.4	0.62	9.4	0.1	2.2	2	0	0	2	2	2	0	KaiC
NB-ARC	PF00931.22	gi|429217434|ref|YP_007175424.1|	-	0.011	14.9	0.0	0.016	14.4	0.0	1.4	1	0	0	1	1	1	0	NB-ARC	domain
Rad17	PF03215.15	gi|429217434|ref|YP_007175424.1|	-	0.012	15.6	0.2	0.025	14.5	0.2	1.7	1	1	0	1	1	1	0	Rad17	P-loop	domain
DUF87	PF01935.17	gi|429217434|ref|YP_007175424.1|	-	0.02	15.0	0.5	0.38	10.8	0.0	2.2	2	0	0	2	2	2	0	Helicase	HerA,	central	domain
ADK	PF00406.22	gi|429217434|ref|YP_007175424.1|	-	0.023	14.8	0.1	0.38	10.9	0.1	2.3	1	1	0	1	1	1	0	Adenylate	kinase
DUF2075	PF09848.9	gi|429217434|ref|YP_007175424.1|	-	0.026	13.8	0.0	0.042	13.1	0.0	1.4	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
NACHT	PF05729.12	gi|429217434|ref|YP_007175424.1|	-	0.027	14.4	0.0	0.057	13.3	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
AAA_3	PF07726.11	gi|429217434|ref|YP_007175424.1|	-	0.036	13.9	0.0	0.17	11.8	0.0	2.0	1	1	1	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Ploopntkinase3	PF18751.1	gi|429217434|ref|YP_007175424.1|	-	0.044	13.7	0.0	0.072	13.0	0.0	1.3	1	0	0	1	1	1	0	P-loop	Nucleotide	Kinase3
APS_kinase	PF01583.20	gi|429217434|ref|YP_007175424.1|	-	0.046	13.6	0.0	0.095	12.6	0.0	1.5	1	1	0	1	1	1	0	Adenylylsulphate	kinase
KTI12	PF08433.10	gi|429217434|ref|YP_007175424.1|	-	0.048	13.1	0.0	0.074	12.5	0.0	1.3	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
AAA_14	PF13173.6	gi|429217434|ref|YP_007175424.1|	-	0.052	13.6	0.2	0.13	12.3	0.0	1.8	1	1	0	2	2	2	0	AAA	domain
AAA_29	PF13555.6	gi|429217434|ref|YP_007175424.1|	-	0.059	13.1	0.2	0.16	11.7	0.2	1.8	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
T2SSE	PF00437.20	gi|429217434|ref|YP_007175424.1|	-	0.069	12.2	0.0	0.11	11.6	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
Guanylate_kin	PF00625.21	gi|429217434|ref|YP_007175424.1|	-	0.072	12.8	0.2	1.2	8.8	0.0	2.0	2	0	0	2	2	2	0	Guanylate	kinase
MobB	PF03205.14	gi|429217434|ref|YP_007175424.1|	-	0.078	12.9	0.0	0.14	12.1	0.0	1.4	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
CoaE	PF01121.20	gi|429217434|ref|YP_007175424.1|	-	0.1	12.3	0.0	0.35	10.5	0.0	1.7	1	1	1	2	2	2	0	Dephospho-CoA	kinase
TsaE	PF02367.17	gi|429217434|ref|YP_007175424.1|	-	0.11	12.5	0.1	0.22	11.5	0.0	1.6	2	0	0	2	2	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_30	PF13604.6	gi|429217434|ref|YP_007175424.1|	-	0.12	12.1	0.0	0.16	11.6	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
MeaB	PF03308.16	gi|429217434|ref|YP_007175424.1|	-	0.13	11.3	0.0	0.52	9.2	0.0	1.9	2	0	0	2	2	2	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
DUF87	PF01935.17	gi|429217435|ref|YP_007175425.1|	-	1.4e-19	71.1	1.2	1.4e-19	71.1	1.2	2.1	3	0	0	3	3	3	1	Helicase	HerA,	central	domain
AAA_10	PF12846.7	gi|429217435|ref|YP_007175425.1|	-	1.3e-08	34.2	1.9	1.3e-08	34.2	1.9	2.3	2	1	0	2	2	2	1	AAA-like	domain
TrwB_AAD_bind	PF10412.9	gi|429217435|ref|YP_007175425.1|	-	6.9e-08	31.8	0.0	0.0004	19.4	0.0	2.9	4	0	0	4	4	4	2	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
DUF853	PF05872.12	gi|429217435|ref|YP_007175425.1|	-	5.5e-07	28.5	0.0	0.00076	18.2	0.0	2.6	3	0	0	3	3	3	2	Bacterial	protein	of	unknown	function	(DUF853)
AAA_22	PF13401.6	gi|429217435|ref|YP_007175425.1|	-	1.8e-06	28.3	0.4	0.00073	19.8	0.4	2.6	1	1	0	1	1	1	1	AAA	domain
ABC_tran	PF00005.27	gi|429217435|ref|YP_007175425.1|	-	0.0003	21.3	0.7	0.041	14.4	0.1	2.7	2	1	0	2	2	2	1	ABC	transporter
Zot	PF05707.12	gi|429217435|ref|YP_007175425.1|	-	0.00036	20.2	0.2	0.0013	18.4	0.0	2.1	2	0	0	2	2	2	1	Zonular	occludens	toxin	(Zot)
FtsK_SpoIIIE	PF01580.18	gi|429217435|ref|YP_007175425.1|	-	0.0009	18.7	0.1	0.0082	15.5	0.0	2.2	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
AAA_16	PF13191.6	gi|429217435|ref|YP_007175425.1|	-	0.0043	17.5	0.1	0.086	13.2	0.1	2.2	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA	PF00004.29	gi|429217435|ref|YP_007175425.1|	-	0.0092	16.4	0.8	3.6	8.0	0.8	3.1	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
SMC_N	PF02463.19	gi|429217435|ref|YP_007175425.1|	-	0.018	14.4	2.4	1.7	8.0	0.1	2.6	3	0	0	3	3	3	0	RecF/RecN/SMC	N	terminal	domain
TraG-D_C	PF12696.7	gi|429217435|ref|YP_007175425.1|	-	0.022	14.7	0.4	0.05	13.6	0.0	1.8	2	0	0	2	2	1	0	TraM	recognition	site	of	TraD	and	TraG
CbiA	PF01656.23	gi|429217435|ref|YP_007175425.1|	-	0.035	14.2	0.2	0.15	12.1	0.2	2.2	1	1	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_24	PF13479.6	gi|429217435|ref|YP_007175425.1|	-	0.047	13.4	2.2	0.5	10.1	2.2	2.5	1	1	0	1	1	1	0	AAA	domain
AAA_14	PF13173.6	gi|429217435|ref|YP_007175425.1|	-	0.049	13.7	3.2	0.87	9.6	0.3	3.4	1	1	1	3	3	3	0	AAA	domain
AAA_19	PF13245.6	gi|429217435|ref|YP_007175425.1|	-	0.12	12.7	0.7	1.3	9.4	0.7	2.3	1	1	0	1	1	1	0	AAA	domain
MCRS_N	PF13325.6	gi|429217435|ref|YP_007175425.1|	-	0.15	12.0	0.8	0.75	9.8	0.0	2.1	2	0	0	2	2	2	0	N-terminal	region	of	micro-spherule	protein
zf_Hakai	PF18408.1	gi|429217435|ref|YP_007175425.1|	-	0.21	11.3	0.0	0.38	10.5	0.0	1.3	1	0	0	1	1	1	0	C2H2	Hakai	zinc	finger	domain
DUF262	PF03235.14	gi|429217435|ref|YP_007175425.1|	-	0.31	11.2	7.7	2.6	8.1	1.3	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF262
ResIII	PF04851.15	gi|429217435|ref|YP_007175425.1|	-	0.42	10.6	4.9	1.1	9.2	0.6	2.6	2	1	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
NB-ARC	PF00931.22	gi|429217435|ref|YP_007175425.1|	-	0.6	9.3	4.4	0.43	9.7	0.1	2.6	3	1	0	3	3	3	0	NB-ARC	domain
Oxidored_molyb	PF00174.19	gi|429217436|ref|YP_007175426.1|	-	2.9e-25	88.9	0.0	5.1e-25	88.1	0.0	1.4	1	0	0	1	1	1	1	Oxidoreductase	molybdopterin	binding	domain
Aldedh	PF00171.22	gi|429217437|ref|YP_007175427.1|	-	1.2e-112	376.8	0.0	1.4e-112	376.6	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
LuxC	PF05893.14	gi|429217437|ref|YP_007175427.1|	-	0.0066	15.5	0.0	0.023	13.8	0.0	1.9	1	1	0	1	1	1	1	Acyl-CoA	reductase	(LuxC)
AMPK1_CBM	PF16561.5	gi|429217437|ref|YP_007175427.1|	-	0.052	13.8	0.0	0.11	12.7	0.0	1.5	1	0	0	1	1	1	0	Glycogen	recognition	site	of	AMP-activated	protein	kinase
PPI_Ypi1	PF07491.11	gi|429217438|ref|YP_007175428.1|	-	0.041	13.7	0.3	0.077	12.8	0.3	1.4	1	0	0	1	1	1	0	Protein	phosphatase	inhibitor
PAC2	PF09754.9	gi|429217439|ref|YP_007175429.1|	-	4.1e-28	98.9	0.0	4.7e-28	98.7	0.0	1.0	1	0	0	1	1	1	1	PAC2	family
Flagellar_rod	PF05149.12	gi|429217439|ref|YP_007175429.1|	-	0.096	12.1	0.3	0.13	11.8	0.3	1.1	1	0	0	1	1	1	0	Paraflagellar	rod	protein
TGT_C2	PF14810.6	gi|429217440|ref|YP_007175430.1|	-	1.1e-17	63.9	0.0	1.9e-17	63.2	0.0	1.4	1	0	0	1	1	1	1	Patch-forming	domain	C2	of	tRNA-guanine	transglycosylase
PUA	PF01472.20	gi|429217440|ref|YP_007175430.1|	-	1.5e-08	34.5	1.2	2.1e-08	34.0	1.2	1.3	1	0	0	1	1	1	1	PUA	domain
UPF0113	PF03657.13	gi|429217440|ref|YP_007175430.1|	-	0.0012	19.0	0.2	0.0029	17.8	0.2	1.7	2	0	0	2	2	2	1	UPF0113	PUA	domain
DUF4933	PF16287.5	gi|429217440|ref|YP_007175430.1|	-	0.074	12.4	0.0	0.095	12.1	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4933)
MazE_antitoxin	PF04014.18	gi|429217440|ref|YP_007175430.1|	-	0.36	10.8	3.7	1	9.4	0.6	2.6	2	0	0	2	2	2	0	Antidote-toxin	recognition	MazE,	bacterial	antitoxin
Sua5_yciO_yrdC	PF01300.18	gi|429217441|ref|YP_007175431.1|	-	7e-49	165.7	0.0	8.2e-49	165.5	0.0	1.0	1	0	0	1	1	1	1	Telomere	recombination
OTCace	PF00185.24	gi|429217442|ref|YP_007175432.1|	-	6e-56	188.9	0.0	8.8e-56	188.3	0.0	1.3	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
OTCace_N	PF02729.21	gi|429217442|ref|YP_007175432.1|	-	1e-44	152.1	0.0	1.5e-44	151.6	0.0	1.3	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
ATPase	PF06745.13	gi|429217443|ref|YP_007175433.1|	-	1.8e-51	174.7	0.5	3.7e-51	173.7	0.5	1.4	1	0	0	1	1	1	1	KaiC
GvpD	PF07088.11	gi|429217443|ref|YP_007175433.1|	-	3.8e-05	22.5	4.1	0.00079	18.2	4.1	2.3	1	1	0	1	1	1	1	GvpD	gas	vesicle	protein
AAA_18	PF13238.6	gi|429217443|ref|YP_007175433.1|	-	4e-05	24.2	0.6	9.8e-05	22.9	0.1	1.9	2	1	0	2	2	2	1	AAA	domain
AAA_22	PF13401.6	gi|429217443|ref|YP_007175433.1|	-	4.2e-05	23.8	0.1	0.00012	22.4	0.1	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_14	PF13173.6	gi|429217443|ref|YP_007175433.1|	-	6e-05	23.1	0.5	6e-05	23.1	0.5	2.3	2	0	0	2	2	2	1	AAA	domain
AAA_24	PF13479.6	gi|429217443|ref|YP_007175433.1|	-	7.6e-05	22.5	0.9	0.00021	21.1	0.9	1.7	1	1	0	1	1	1	1	AAA	domain
DUF2075	PF09848.9	gi|429217443|ref|YP_007175433.1|	-	0.00036	19.9	0.0	0.00049	19.4	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_25	PF13481.6	gi|429217443|ref|YP_007175433.1|	-	0.0017	18.0	0.0	0.0059	16.2	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
Zeta_toxin	PF06414.12	gi|429217443|ref|YP_007175433.1|	-	0.015	14.6	0.0	0.029	13.6	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
ABC_tran	PF00005.27	gi|429217443|ref|YP_007175433.1|	-	0.017	15.6	0.2	0.041	14.4	0.0	1.8	2	0	0	2	2	2	0	ABC	transporter
AAA_16	PF13191.6	gi|429217443|ref|YP_007175433.1|	-	0.02	15.3	0.1	0.055	13.8	0.1	1.7	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_19	PF13245.6	gi|429217443|ref|YP_007175433.1|	-	0.025	14.9	0.0	0.053	13.8	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
TniB	PF05621.11	gi|429217443|ref|YP_007175433.1|	-	0.031	13.7	0.8	0.71	9.3	0.8	2.4	1	1	0	1	1	1	0	Bacterial	TniB	protein
AAA_7	PF12775.7	gi|429217443|ref|YP_007175433.1|	-	0.04	13.4	0.0	0.084	12.4	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
AAA	PF00004.29	gi|429217443|ref|YP_007175433.1|	-	0.042	14.3	0.5	0.15	12.5	0.5	1.9	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sigma54_activat	PF00158.26	gi|429217443|ref|YP_007175433.1|	-	0.089	12.5	0.0	0.2	11.3	0.0	1.6	1	1	0	1	1	1	0	Sigma-54	interaction	domain
NACHT	PF05729.12	gi|429217443|ref|YP_007175433.1|	-	0.096	12.6	0.1	1.7	8.6	0.0	2.5	3	0	0	3	3	3	0	NACHT	domain
DnaB_C	PF03796.15	gi|429217443|ref|YP_007175433.1|	-	0.098	12.0	0.0	0.23	10.8	0.0	1.6	2	0	0	2	2	2	0	DnaB-like	helicase	C	terminal	domain
Roc	PF08477.13	gi|429217443|ref|YP_007175433.1|	-	0.15	12.3	0.0	0.81	9.9	0.0	2.2	3	0	0	3	3	2	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
TrwB_AAD_bind	PF10412.9	gi|429217443|ref|YP_007175433.1|	-	0.18	10.7	0.0	0.68	8.8	0.0	1.8	2	0	0	2	2	2	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AHD	PF17793.1	gi|429217444|ref|YP_007175434.1|	-	0.041	13.7	0.2	1.6	8.6	0.0	2.3	2	0	0	2	2	2	0	ANC1	homology	domain	(AHD)
LAGLIDADG_2	PF03161.13	gi|429217445|ref|YP_007175435.1|	-	0.0079	16.2	1.2	0.038	14.0	0.1	1.8	1	1	0	2	2	2	1	LAGLIDADG	DNA	endonuclease	family
DUF4542	PF15075.6	gi|429217445|ref|YP_007175435.1|	-	0.072	13.5	0.1	0.077	13.4	0.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4542)
ACP_PD	PF04336.12	gi|429217445|ref|YP_007175435.1|	-	0.077	13.4	0.0	0.15	12.5	0.0	1.5	1	1	0	1	1	1	0	Acyl	carrier	protein	phosphodiesterase
ParB	PF08775.10	gi|429217445|ref|YP_007175435.1|	-	0.087	13.3	1.3	0.22	12.0	0.4	1.8	2	0	0	2	2	2	0	ParB	family
Peptidase_M50	PF02163.22	gi|429217446|ref|YP_007175436.1|	-	7.3e-06	25.4	11.7	7.8e-06	25.3	0.5	3.0	1	1	1	2	2	2	1	Peptidase	family	M50
FA_desaturase	PF00487.24	gi|429217446|ref|YP_007175436.1|	-	3.2	7.5	11.9	0.23	11.3	0.3	2.5	1	1	1	2	2	2	0	Fatty	acid	desaturase
CTP_transf_like	PF01467.26	gi|429217447|ref|YP_007175437.1|	-	2.5e-10	40.7	0.0	4.4e-10	39.9	0.0	1.6	1	1	0	1	1	1	1	Cytidylyltransferase-like
eRF1_2	PF03464.15	gi|429217448|ref|YP_007175438.1|	-	7.6e-43	146.0	0.2	1.3e-42	145.2	0.2	1.3	1	0	0	1	1	1	1	eRF1	domain	2
eRF1_3	PF03465.15	gi|429217448|ref|YP_007175438.1|	-	1.6e-21	76.9	0.4	2e-19	70.2	0.0	3.3	3	1	0	3	3	3	1	eRF1	domain	3
acVLRF1	PF18859.1	gi|429217448|ref|YP_007175438.1|	-	2.2e-14	53.9	0.1	9.9e-14	51.8	0.0	2.1	3	0	0	3	3	3	1	Actinobacteria/chloroflexi	VLRF1	release	factor
baeRF_family10	PF18854.1	gi|429217448|ref|YP_007175438.1|	-	7e-11	42.5	0.0	1.4e-10	41.6	0.0	1.5	1	0	0	1	1	1	1	Bacterial	archaeo-eukaryotic	release	factor	family	10
ELP6	PF09807.9	gi|429217449|ref|YP_007175439.1|	-	0.042	13.3	0.0	0.043	13.2	0.0	1.1	1	0	0	1	1	1	0	Elongation	complex	protein	6
Translat_reg	PF01818.17	gi|429217450|ref|YP_007175440.1|	-	0.027	14.5	0.1	0.044	13.8	0.1	1.5	1	1	0	1	1	1	0	Bacteriophage	translational	regulator
Stork_head	PF10264.9	gi|429217450|ref|YP_007175440.1|	-	0.039	14.1	0.1	1	9.5	0.0	2.1	1	1	1	2	2	2	0	Winged	helix	Storkhead-box1	domain
Med1	PF10744.9	gi|429217450|ref|YP_007175440.1|	-	0.062	12.3	0.1	0.073	12.1	0.1	1.1	1	0	0	1	1	1	0	Mediator	of	RNA	polymerase	II	transcription	subunit	1
DUF3782	PF12644.7	gi|429217450|ref|YP_007175440.1|	-	0.13	12.4	0.2	0.74	10.0	0.0	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3782)
HTH_45	PF14947.6	gi|429217452|ref|YP_007175442.1|	-	0.00094	19.1	1.4	0.0052	16.7	0.7	2.1	2	0	0	2	2	2	1	Winged	helix-turn-helix
Fe_dep_repress	PF01325.19	gi|429217452|ref|YP_007175442.1|	-	0.011	15.9	0.0	0.028	14.6	0.0	1.7	2	0	0	2	2	2	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Condensin2nSMC	PF12422.8	gi|429217452|ref|YP_007175442.1|	-	0.042	14.0	0.1	0.057	13.6	0.1	1.3	1	0	0	1	1	1	0	Condensin	II	non	structural	maintenance	of	chromosomes	subunit
DUF4093	PF13331.6	gi|429217452|ref|YP_007175442.1|	-	0.044	14.2	0.0	0.085	13.3	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4093)
HTH_45	PF14947.6	gi|429217453|ref|YP_007175443.1|	-	1.8e-06	27.8	1.0	0.00011	22.1	0.0	2.5	2	0	0	2	2	2	1	Winged	helix-turn-helix
HTH_5	PF01022.20	gi|429217453|ref|YP_007175443.1|	-	0.0011	18.8	0.0	0.0028	17.5	0.0	1.7	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
GAD-like	PF08887.11	gi|429217453|ref|YP_007175443.1|	-	0.009	15.8	0.0	0.016	14.9	0.0	1.4	1	0	0	1	1	1	1	GAD-like	domain
TrmB	PF01978.19	gi|429217453|ref|YP_007175443.1|	-	0.046	13.6	0.0	0.31	11.0	0.0	2.2	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
Cass2	PF14526.6	gi|429217453|ref|YP_007175443.1|	-	0.072	13.3	0.1	0.13	12.4	0.1	1.4	1	0	0	1	1	1	0	Integron-associated	effector	binding	protein
Rrf2	PF02082.20	gi|429217453|ref|YP_007175443.1|	-	0.079	13.3	0.0	6.4	7.2	0.0	2.5	2	0	0	2	2	2	0	Transcriptional	regulator
AAA	PF00004.29	gi|429217454|ref|YP_007175444.1|	-	1.1e-42	145.5	0.2	2.3e-42	144.5	0.0	1.6	2	0	0	2	2	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_lid_3	PF17862.1	gi|429217454|ref|YP_007175444.1|	-	1.2e-13	50.6	0.1	2.6e-13	49.5	0.1	1.6	1	0	0	1	1	1	1	AAA+	lid	domain
Prot_ATP_ID_OB	PF16450.5	gi|429217454|ref|YP_007175444.1|	-	2.5e-13	49.8	0.4	6.1e-13	48.5	0.1	1.9	2	0	0	2	2	1	1	Proteasomal	ATPase	OB	C-terminal	domain
AAA_16	PF13191.6	gi|429217454|ref|YP_007175444.1|	-	7.9e-08	32.9	0.5	0.00023	21.6	0.1	2.9	3	1	1	4	4	3	2	AAA	ATPase	domain
AAA_2	PF07724.14	gi|429217454|ref|YP_007175444.1|	-	1.1e-06	28.8	0.0	3.5e-06	27.2	0.0	1.8	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
AAA_5	PF07728.14	gi|429217454|ref|YP_007175444.1|	-	1e-05	25.5	0.2	6.1e-05	23.0	0.2	2.3	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
Prot_ATP_OB_N	PF17758.1	gi|429217454|ref|YP_007175444.1|	-	1.8e-05	24.3	0.4	5.1e-05	22.8	0.1	1.9	2	0	0	2	2	1	1	Proteasomal	ATPase	OB	N-terminal	domain
RuvB_N	PF05496.12	gi|429217454|ref|YP_007175444.1|	-	5.8e-05	22.9	0.0	0.00015	21.6	0.0	1.7	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_22	PF13401.6	gi|429217454|ref|YP_007175444.1|	-	0.0005	20.4	0.3	0.013	15.8	0.1	2.3	1	1	1	2	2	2	1	AAA	domain
AAA_33	PF13671.6	gi|429217454|ref|YP_007175444.1|	-	0.0043	17.2	0.0	0.01	16.0	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
DUF815	PF05673.13	gi|429217454|ref|YP_007175444.1|	-	0.0047	16.1	0.0	0.0092	15.2	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
RNA_helicase	PF00910.22	gi|429217454|ref|YP_007175444.1|	-	0.0049	17.2	0.0	0.014	15.7	0.0	1.8	1	0	0	1	1	1	1	RNA	helicase
AAA_24	PF13479.6	gi|429217454|ref|YP_007175444.1|	-	0.0059	16.3	0.2	0.018	14.7	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
Mg_chelatase	PF01078.21	gi|429217454|ref|YP_007175444.1|	-	0.007	15.8	0.1	0.015	14.7	0.1	1.5	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
IstB_IS21	PF01695.17	gi|429217454|ref|YP_007175444.1|	-	0.0078	16.0	0.0	0.014	15.2	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
ABC_tran	PF00005.27	gi|429217454|ref|YP_007175444.1|	-	0.011	16.3	0.2	0.12	12.9	0.0	2.6	2	1	0	2	2	2	0	ABC	transporter
AAA_3	PF07726.11	gi|429217454|ref|YP_007175444.1|	-	0.011	15.6	0.0	0.025	14.4	0.0	1.6	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_7	PF12775.7	gi|429217454|ref|YP_007175444.1|	-	0.014	14.9	0.0	0.04	13.4	0.0	1.7	1	1	0	1	1	1	0	P-loop	containing	dynein	motor	region
AAA_28	PF13521.6	gi|429217454|ref|YP_007175444.1|	-	0.015	15.5	0.0	0.029	14.6	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_14	PF13173.6	gi|429217454|ref|YP_007175444.1|	-	0.02	15.0	0.0	0.053	13.6	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
TIP49	PF06068.13	gi|429217454|ref|YP_007175444.1|	-	0.021	14.1	0.0	0.035	13.3	0.0	1.3	1	0	0	1	1	1	0	TIP49	P-loop	domain
AAA_25	PF13481.6	gi|429217454|ref|YP_007175444.1|	-	0.022	14.4	0.2	0.07	12.7	0.1	1.8	1	1	1	2	2	2	0	AAA	domain
AAA_18	PF13238.6	gi|429217454|ref|YP_007175444.1|	-	0.023	15.2	0.0	0.05	14.1	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
ATPase_2	PF01637.18	gi|429217454|ref|YP_007175444.1|	-	0.032	14.2	0.7	3.1	7.7	0.0	2.7	2	1	1	3	3	2	0	ATPase	domain	predominantly	from	Archaea
NACHT	PF05729.12	gi|429217454|ref|YP_007175444.1|	-	0.035	14.0	0.1	0.12	12.3	0.1	1.9	1	1	0	1	1	1	0	NACHT	domain
TsaE	PF02367.17	gi|429217454|ref|YP_007175444.1|	-	0.1	12.6	0.0	0.19	11.8	0.0	1.4	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
ATPase	PF06745.13	gi|429217454|ref|YP_007175444.1|	-	0.1	11.9	1.7	0.39	10.0	0.0	2.6	3	0	0	3	3	3	0	KaiC
Parvo_NS1	PF01057.17	gi|429217454|ref|YP_007175444.1|	-	0.16	11.1	0.0	0.5	9.4	0.0	1.7	2	0	0	2	2	2	0	Parvovirus	non-structural	protein	NS1
DNA_methylase	PF00145.17	gi|429217455|ref|YP_007175445.1|	-	2.2e-49	168.6	0.0	4e-34	118.5	0.1	2.0	1	1	1	2	2	2	2	C-5	cytosine-specific	DNA	methylase
Methyltransf_15	PF09445.10	gi|429217455|ref|YP_007175445.1|	-	0.00078	19.0	0.0	0.0016	18.1	0.0	1.4	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Cons_hypoth95	PF03602.15	gi|429217455|ref|YP_007175445.1|	-	0.022	14.4	0.0	0.048	13.3	0.0	1.6	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
TFIIE_alpha	PF02002.17	gi|429217456|ref|YP_007175446.1|	-	5.2e-15	55.2	3.6	1.6e-14	53.6	0.2	2.3	2	1	0	2	2	2	1	TFIIE	alpha	subunit
TF_Zn_Ribbon	PF08271.12	gi|429217456|ref|YP_007175446.1|	-	1.5e-05	24.4	0.3	3.4e-05	23.3	0.3	1.6	1	0	0	1	1	1	1	TFIIB	zinc-binding
zinc_ribbon_10	PF10058.9	gi|429217456|ref|YP_007175446.1|	-	0.042	13.6	0.6	0.15	11.8	0.2	2.0	2	0	0	2	2	2	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
RNA_POL_M_15KD	PF02150.16	gi|429217456|ref|YP_007175446.1|	-	0.057	13.3	0.2	0.15	12.0	0.2	1.7	1	0	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
CpXC	PF14353.6	gi|429217456|ref|YP_007175446.1|	-	0.097	12.7	0.2	0.54	10.3	0.0	2.1	2	1	0	2	2	2	0	CpXC	protein
HypA	PF01155.19	gi|429217456|ref|YP_007175446.1|	-	0.13	12.3	0.0	0.19	11.7	0.0	1.3	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
DUF1610	PF07754.11	gi|429217456|ref|YP_007175446.1|	-	0.21	11.6	0.5	0.56	10.2	0.5	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1610)
Trm56	PF01994.16	gi|429217457|ref|YP_007175447.1|	-	2.7e-47	159.6	0.1	3.4e-47	159.2	0.1	1.1	1	0	0	1	1	1	1	tRNA	ribose	2'-O-methyltransferase,	aTrm56
SpoU_methylase	PF00588.19	gi|429217457|ref|YP_007175447.1|	-	0.1	12.8	0.0	0.14	12.4	0.0	1.1	1	0	0	1	1	1	0	SpoU	rRNA	Methylase	family
MMR_HSR1	PF01926.23	gi|429217458|ref|YP_007175448.1|	-	3.9e-18	65.6	0.2	1.7e-17	63.5	0.1	2.0	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
GTP-bdg_M	PF16360.5	gi|429217458|ref|YP_007175448.1|	-	3.7e-13	49.9	1.1	7.9e-13	48.8	1.1	1.6	1	0	0	1	1	1	1	GTP-binding	GTPase	Middle	Region
GTP-bdg_N	PF13167.6	gi|429217458|ref|YP_007175448.1|	-	7.2e-13	49.0	0.3	3.7e-12	46.7	0.1	2.3	2	0	0	2	2	2	1	GTP-binding	GTPase	N-terminal
FeoB_N	PF02421.18	gi|429217458|ref|YP_007175448.1|	-	1.1e-09	37.9	0.4	2.3e-09	37.0	0.4	1.5	1	0	0	1	1	1	1	Ferrous	iron	transport	protein	B
GTP_EFTU	PF00009.27	gi|429217458|ref|YP_007175448.1|	-	3e-07	30.2	0.2	7.3e-06	25.7	0.1	2.3	1	1	1	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
MMR_HSR1_Xtn	PF16897.5	gi|429217458|ref|YP_007175448.1|	-	8e-05	22.6	1.9	0.0002	21.3	1.9	1.7	1	0	0	1	1	1	1	C-terminal	region	of	MMR_HSR1	domain
PduV-EutP	PF10662.9	gi|429217458|ref|YP_007175448.1|	-	0.0011	18.7	1.7	0.0039	16.9	1.7	1.9	1	1	0	1	1	1	1	Ethanolamine	utilisation	-	propanediol	utilisation
Dynamin_N	PF00350.23	gi|429217458|ref|YP_007175448.1|	-	0.0077	16.3	0.3	0.079	13.0	0.0	2.3	1	1	1	2	2	2	1	Dynamin	family
SRPRB	PF09439.10	gi|429217458|ref|YP_007175448.1|	-	0.015	14.7	0.1	0.033	13.6	0.1	1.6	1	1	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
NOG1	PF06858.14	gi|429217458|ref|YP_007175448.1|	-	0.02	14.7	0.7	0.02	14.7	0.7	2.7	3	1	0	3	3	3	0	Nucleolar	GTP-binding	protein	1	(NOG1)
ABC_tran	PF00005.27	gi|429217458|ref|YP_007175448.1|	-	0.11	13.0	0.1	0.32	11.5	0.1	1.7	1	1	0	1	1	1	0	ABC	transporter
MatP_C	PF17414.2	gi|429217458|ref|YP_007175448.1|	-	0.13	12.5	1.4	10	6.4	0.1	2.5	2	0	0	2	2	2	0	MatP	C-terminal	ribbon-helix-helix	domain
HTH_3	PF01381.22	gi|429217459|ref|YP_007175449.1|	-	3.7e-10	39.7	2.7	6.5e-10	38.9	2.7	1.3	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.7	gi|429217459|ref|YP_007175449.1|	-	2.1e-08	34.1	0.7	3.2e-08	33.4	0.7	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_31	PF13560.6	gi|429217459|ref|YP_007175449.1|	-	1e-07	32.1	0.0	1.5e-07	31.7	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_25	PF13413.6	gi|429217459|ref|YP_007175449.1|	-	1.6e-06	27.9	0.2	3.3e-06	26.9	0.2	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_37	PF13744.6	gi|429217459|ref|YP_007175449.1|	-	0.044	13.8	0.3	0.075	13.0	0.3	1.4	1	1	0	1	1	1	0	Helix-turn-helix	domain
Pribosyltran	PF00156.27	gi|429217460|ref|YP_007175450.1|	-	1.4e-23	83.1	0.0	4e-23	81.7	0.0	1.6	2	0	0	2	2	2	1	Phosphoribosyl	transferase	domain
Ribosomal_S17e	PF00833.18	gi|429217461|ref|YP_007175451.1|	-	4e-17	62.3	0.9	4.5e-17	62.1	0.9	1.1	1	0	0	1	1	1	1	Ribosomal	S17
Seadorna_VP7	PF07387.11	gi|429217461|ref|YP_007175451.1|	-	0.035	13.2	0.2	0.04	13.0	0.2	1.1	1	0	0	1	1	1	0	Seadornavirus	VP7
PAH	PF02671.21	gi|429217461|ref|YP_007175451.1|	-	0.1	12.8	0.4	0.24	11.6	0.1	1.8	2	0	0	2	2	2	0	Paired	amphipathic	helix	repeat
tRNA-synt_1e	PF01406.19	gi|429217462|ref|YP_007175452.1|	-	9.7e-128	425.7	2.0	9.7e-128	425.7	2.0	1.8	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1g	PF09334.11	gi|429217462|ref|YP_007175452.1|	-	8.8e-17	60.9	3.7	3.9e-10	39.0	0.6	2.5	2	1	0	2	2	2	2	tRNA	synthetases	class	I	(M)
tRNA-synt_1	PF00133.22	gi|429217462|ref|YP_007175452.1|	-	1.3e-13	50.1	0.1	1.4e-10	40.1	0.0	2.5	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(I,	L,	M	and	V)
DALR_2	PF09190.11	gi|429217462|ref|YP_007175452.1|	-	0.00013	22.3	0.2	0.0012	19.3	0.0	2.6	3	0	0	3	3	3	1	DALR	domain
tRNA-synt_1f	PF01921.18	gi|429217462|ref|YP_007175452.1|	-	0.00018	20.6	0.2	0.0076	15.2	0.1	2.2	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(K)
23S_rRNA_IVP	PF05635.11	gi|429217462|ref|YP_007175452.1|	-	0.022	15.1	0.8	0.12	12.7	0.0	2.5	2	0	0	2	2	2	0	23S	rRNA-intervening	sequence	protein
tRNA-synt_1c	PF00749.21	gi|429217462|ref|YP_007175452.1|	-	0.029	13.3	5.7	0.096	11.6	0.6	3.4	2	2	1	3	3	3	0	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
tRNA-synt_1b	PF00579.25	gi|429217462|ref|YP_007175452.1|	-	0.052	12.9	1.2	0.098	12.0	0.6	1.8	1	1	1	2	2	2	0	tRNA	synthetases	class	I	(W	and	Y)
ApoA-II	PF04711.13	gi|429217462|ref|YP_007175452.1|	-	0.053	13.7	0.1	3.4	7.9	0.0	3.3	3	1	0	3	3	3	0	Apolipoprotein	A-II	(ApoA-II)
DASH_Dad1	PF08649.10	gi|429217462|ref|YP_007175452.1|	-	0.091	13.0	0.2	0.55	10.5	0.2	2.5	1	0	0	1	1	1	0	DASH	complex	subunit	Dad1
RTT107_BRCT_5	PF16770.5	gi|429217462|ref|YP_007175452.1|	-	0.13	12.1	0.7	0.51	10.3	0.1	2.3	2	0	0	2	2	2	0	Regulator	of	Ty1	transposition	protein	107	BRCT	domain
UbiA	PF01040.18	gi|429217463|ref|YP_007175453.1|	-	1.2e-33	116.5	15.2	2e-33	115.8	15.2	1.4	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
DAO	PF01266.24	gi|429217464|ref|YP_007175454.1|	-	2.2e-07	30.8	0.0	0.0051	16.4	0.0	2.2	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
FAD_binding_3	PF01494.19	gi|429217464|ref|YP_007175454.1|	-	6.5e-05	22.3	0.0	0.0049	16.2	0.0	2.2	2	0	0	2	2	2	1	FAD	binding	domain
Pyr_redox_2	PF07992.14	gi|429217464|ref|YP_007175454.1|	-	9.7e-05	21.7	0.2	0.0019	17.5	0.1	2.1	1	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_oxidored	PF12831.7	gi|429217464|ref|YP_007175454.1|	-	0.00057	19.4	0.1	0.019	14.4	0.0	2.2	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Trp_halogenase	PF04820.14	gi|429217464|ref|YP_007175454.1|	-	0.0013	17.7	0.0	0.26	10.1	0.0	2.5	2	1	0	2	2	2	2	Tryptophan	halogenase
Pyr_redox	PF00070.27	gi|429217464|ref|YP_007175454.1|	-	0.0049	17.4	0.1	1	10.0	0.0	2.5	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.24	gi|429217464|ref|YP_007175454.1|	-	0.0063	15.6	0.0	0.18	10.9	0.1	2.2	2	0	0	2	2	2	1	FAD	binding	domain
Thi4	PF01946.17	gi|429217464|ref|YP_007175454.1|	-	0.012	14.9	0.0	0.038	13.2	0.0	1.8	2	0	0	2	2	2	0	Thi4	family
NAD_binding_8	PF13450.6	gi|429217464|ref|YP_007175454.1|	-	0.064	13.5	0.0	0.14	12.4	0.0	1.6	1	0	0	1	1	1	0	NAD(P)-binding	Rossmann-like	domain
Lycopene_cycl	PF05834.12	gi|429217464|ref|YP_007175454.1|	-	0.078	12.0	0.1	0.19	10.7	0.1	1.6	2	0	0	2	2	2	0	Lycopene	cyclase	protein
HI0933_like	PF03486.14	gi|429217464|ref|YP_007175454.1|	-	0.095	11.4	0.2	8.2	5.0	0.1	2.9	3	0	0	3	3	3	0	HI0933-like	protein
GIDA	PF01134.22	gi|429217464|ref|YP_007175454.1|	-	0.14	11.2	0.0	0.2	10.7	0.0	1.3	1	0	0	1	1	1	0	Glucose	inhibited	division	protein	A
DUF5402	PF17393.2	gi|429217465|ref|YP_007175455.1|	-	0.52	10.3	5.6	0.94	9.4	4.1	2.0	1	1	1	2	2	2	0	Family	of	unknown	function	(DUF5402)
HSP20	PF00011.21	gi|429217466|ref|YP_007175456.1|	-	2.2e-15	56.6	6.1	7.5e-15	54.9	3.1	2.4	2	1	0	2	2	2	1	Hsp20/alpha	crystallin	family
ArsA_HSP20	PF17886.1	gi|429217466|ref|YP_007175456.1|	-	1.9e-13	49.7	0.0	2.7e-13	49.2	0.0	1.2	1	0	0	1	1	1	1	HSP20-like	domain	found	in	ArsA
CS	PF04969.16	gi|429217466|ref|YP_007175456.1|	-	0.00013	22.9	1.6	0.00022	22.1	1.6	1.4	1	0	0	1	1	1	1	CS	domain
PIH1_CS	PF18201.1	gi|429217466|ref|YP_007175456.1|	-	0.00017	21.9	0.0	0.00028	21.2	0.0	1.3	1	0	0	1	1	1	1	PIH1	CS-like	domain
GvpH	PF05455.11	gi|429217466|ref|YP_007175456.1|	-	0.0018	18.4	0.0	0.0021	18.2	0.0	1.3	1	0	0	1	1	1	1	GvpH
Sigma70_ner	PF04546.13	gi|429217468|ref|YP_007175458.1|	-	0.018	14.9	0.1	0.024	14.5	0.1	1.2	1	0	0	1	1	1	0	Sigma-70,	non-essential	region
Ribosomal_L11_N	PF03946.14	gi|429217470|ref|YP_007175460.1|	-	7e-25	86.7	1.5	2.8e-24	84.7	0.6	2.1	2	0	0	2	2	2	1	Ribosomal	protein	L11,	N-terminal	domain
Ribosomal_L11	PF00298.19	gi|429217470|ref|YP_007175460.1|	-	1.5e-16	60.7	0.1	3.4e-16	59.5	0.1	1.6	1	0	0	1	1	1	1	Ribosomal	protein	L11,	RNA	binding	domain
CBS	PF00571.28	gi|429217472|ref|YP_007175462.1|	-	1.2e-23	83.3	2.6	7.8e-12	45.5	0.3	2.0	2	0	0	2	2	2	2	CBS	domain
AFOR_N	PF02730.15	gi|429217473|ref|YP_007175463.1|	-	5.1e-39	134.2	0.2	7.7e-39	133.6	0.2	1.3	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
AFOR_C	PF01314.18	gi|429217473|ref|YP_007175463.1|	-	1.7e-15	56.9	0.0	2.5e-15	56.4	0.0	1.2	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	domains	2	&	3
Staphostatin_B	PF09023.10	gi|429217473|ref|YP_007175463.1|	-	0.094	12.8	0.4	1	9.4	0.1	2.4	2	0	0	2	2	2	0	Staphostatin	B
RTX_C	PF08339.10	gi|429217473|ref|YP_007175463.1|	-	0.22	11.6	2.6	0.9	9.6	0.6	2.3	2	0	0	2	2	2	0	RTX	C-terminal	domain
tRNA-synt_2c	PF01411.19	gi|429217474|ref|YP_007175464.1|	-	2.3e-113	379.6	0.0	5e-113	378.5	0.0	1.6	1	1	0	1	1	1	1	tRNA	synthetases	class	II	(A)
tRNA_SAD	PF07973.14	gi|429217474|ref|YP_007175464.1|	-	8.7e-14	51.3	0.3	2e-13	50.2	0.3	1.7	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
DHHA1	PF02272.19	gi|429217474|ref|YP_007175464.1|	-	1.7e-07	31.7	2.6	4.1e-07	30.5	2.6	1.7	1	0	0	1	1	1	1	DHHA1	domain
Com_YlbF	PF06133.11	gi|429217474|ref|YP_007175464.1|	-	0.01	16.5	5.4	0.026	15.1	2.6	2.7	3	0	0	3	3	3	0	Control	of	competence	regulator	ComK,	YlbF/YmcA
KIP1	PF07765.12	gi|429217474|ref|YP_007175464.1|	-	0.14	12.2	1.7	0.44	10.7	1.7	1.9	1	0	0	1	1	1	0	KIP1-like	protein
PCRF	PF03462.18	gi|429217474|ref|YP_007175464.1|	-	3.6	7.4	7.7	0.64	9.9	2.8	2.1	2	0	0	2	2	2	0	PCRF	domain
Ribosomal_60s	PF00428.19	gi|429217475|ref|YP_007175465.1|	-	3.4e-14	53.2	10.4	4.2e-14	52.9	10.4	1.1	1	0	0	1	1	1	1	60s	Acidic	ribosomal	protein
AMP-binding	PF00501.28	gi|429217475|ref|YP_007175465.1|	-	0.11	11.0	0.9	0.13	10.8	0.9	1.0	1	0	0	1	1	1	0	AMP-binding	enzyme
DUF2789	PF10982.8	gi|429217475|ref|YP_007175465.1|	-	0.12	12.5	0.0	0.19	11.9	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2789)
Cytomega_UL84	PF06284.11	gi|429217475|ref|YP_007175465.1|	-	0.16	10.4	1.4	0.17	10.3	1.4	1.0	1	0	0	1	1	1	0	Cytomegalovirus	UL84	protein
CBS	PF00571.28	gi|429217476|ref|YP_007175466.1|	-	1.3e-28	99.2	2.3	2.1e-16	60.1	0.1	2.1	2	0	0	2	2	2	2	CBS	domain
Ribosomal_L1	PF00687.21	gi|429217477|ref|YP_007175467.1|	-	1.2e-35	123.1	0.4	1.4e-35	122.9	0.4	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L1p/L10e	family
RL10P_insert	PF17777.1	gi|429217478|ref|YP_007175468.1|	-	6.6e-22	77.3	1.2	7.1e-21	74.0	0.1	2.7	3	0	0	3	3	3	1	Insertion	domain	in	60S	ribosomal	protein	L10P
Ribosomal_L10	PF00466.20	gi|429217478|ref|YP_007175468.1|	-	8.7e-18	64.3	1.9	1.9e-17	63.2	1.9	1.6	1	0	0	1	1	1	1	Ribosomal	protein	L10
DUF4346	PF14251.6	gi|429217478|ref|YP_007175468.1|	-	0.019	15.0	0.1	0.036	14.1	0.1	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4346)
Ribosomal_60s	PF00428.19	gi|429217478|ref|YP_007175468.1|	-	0.019	15.5	12.0	0.05	14.2	10.7	2.3	2	1	0	2	2	2	0	60s	Acidic	ribosomal	protein
DUF5614	PF18474.1	gi|429217478|ref|YP_007175468.1|	-	0.062	12.6	1.3	0.11	11.9	1.3	1.3	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5614)
CcdA	PF07362.12	gi|429217478|ref|YP_007175468.1|	-	0.14	12.6	2.3	0.35	11.3	1.0	2.2	2	0	0	2	2	2	0	Post-segregation	antitoxin	CcdA
7TMR-HDED	PF07697.11	gi|429217478|ref|YP_007175468.1|	-	0.79	9.8	8.9	2.7	8.1	0.2	2.5	2	0	0	2	2	2	0	7TM-HD	extracellular
DUF4446	PF14584.6	gi|429217479|ref|YP_007175469.1|	-	0.024	14.6	0.1	0.034	14.1	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4446)
COMP	PF11598.8	gi|429217479|ref|YP_007175469.1|	-	0.13	12.8	0.1	0.28	11.7	0.1	1.5	1	0	0	1	1	1	0	Cartilage	oligomeric	matrix	protein
FCD	PF07729.12	gi|429217480|ref|YP_007175470.1|	-	2.3e-28	99.1	2.5	3.1e-28	98.7	2.5	1.1	1	0	0	1	1	1	1	FCD	domain
GntR	PF00392.21	gi|429217480|ref|YP_007175470.1|	-	1.4e-16	59.8	0.0	3.1e-16	58.8	0.0	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HTH_27	PF13463.6	gi|429217480|ref|YP_007175470.1|	-	0.00088	19.7	0.0	0.003	18.0	0.0	2.0	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_11	PF08279.12	gi|429217480|ref|YP_007175470.1|	-	0.0028	17.6	0.0	0.0089	15.9	0.0	1.9	1	0	0	1	1	1	1	HTH	domain
Fe_dep_repress	PF01325.19	gi|429217480|ref|YP_007175470.1|	-	0.0032	17.6	0.1	0.013	15.7	0.0	2.0	2	0	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_24	PF13412.6	gi|429217480|ref|YP_007175470.1|	-	0.0049	16.4	0.0	0.018	14.6	0.0	2.1	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.19	gi|429217480|ref|YP_007175470.1|	-	0.008	16.0	0.0	0.023	14.5	0.0	1.8	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_DeoR	PF08220.12	gi|429217480|ref|YP_007175470.1|	-	0.0099	15.6	0.0	0.026	14.3	0.0	1.7	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
MarR	PF01047.22	gi|429217480|ref|YP_007175470.1|	-	0.012	15.5	0.2	0.12	12.3	0.0	2.3	1	1	1	2	2	2	0	MarR	family
Rrf2	PF02082.20	gi|429217480|ref|YP_007175470.1|	-	0.051	13.9	0.0	0.14	12.6	0.0	1.7	1	0	0	1	1	1	0	Transcriptional	regulator
DUF1128	PF06569.11	gi|429217480|ref|YP_007175470.1|	-	0.069	13.1	0.0	0.26	11.3	0.0	2.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1128)
HTH_Crp_2	PF13545.6	gi|429217480|ref|YP_007175470.1|	-	0.07	13.1	0.0	0.14	12.1	0.0	1.6	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
BLACT_WH	PF17778.1	gi|429217480|ref|YP_007175470.1|	-	0.084	12.9	1.2	0.14	12.1	0.1	2.0	2	0	0	2	2	1	0	Beta-lactamase	associated	winged	helix	domain
APOBEC4	PF18775.1	gi|429217480|ref|YP_007175470.1|	-	0.15	12.3	0.0	0.3	11.3	0.0	1.5	1	0	0	1	1	1	0	APOBEC4
DrrA_P4M	PF14860.6	gi|429217480|ref|YP_007175470.1|	-	0.17	11.8	3.9	7.4	6.5	0.1	2.8	2	2	0	2	2	2	0	DrrA	phosphatidylinositol	4-phosphate	binding	domain
DUF1957	PF09210.11	gi|429217480|ref|YP_007175470.1|	-	0.2	12.1	2.6	1.3	9.4	0.2	2.9	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF1957)
Pyr_redox_2	PF07992.14	gi|429217481|ref|YP_007175471.1|	-	7.8e-52	176.3	0.1	9e-52	176.1	0.1	1.0	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|429217481|ref|YP_007175471.1|	-	8.3e-27	94.2	0.2	1.5e-22	80.2	0.0	2.1	1	1	1	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|429217481|ref|YP_007175471.1|	-	8.5e-15	55.1	3.8	8.6e-13	48.7	0.3	3.0	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.24	gi|429217481|ref|YP_007175471.1|	-	3e-10	39.8	2.0	0.0053	15.9	0.3	3.6	2	1	2	4	4	4	3	FAD	binding	domain
FAD_oxidored	PF12831.7	gi|429217481|ref|YP_007175471.1|	-	1e-06	28.4	1.1	0.00047	19.6	0.0	3.0	3	0	0	3	3	3	1	FAD	dependent	oxidoreductase
FAD_binding_3	PF01494.19	gi|429217481|ref|YP_007175471.1|	-	5e-06	26.0	0.0	0.026	13.8	0.2	2.3	2	0	0	2	2	2	2	FAD	binding	domain
HI0933_like	PF03486.14	gi|429217481|ref|YP_007175471.1|	-	7.8e-06	24.8	1.1	0.089	11.5	0.1	3.4	3	1	0	3	3	3	3	HI0933-like	protein
GIDA	PF01134.22	gi|429217481|ref|YP_007175471.1|	-	9.5e-06	24.9	9.2	0.041	13.0	0.1	3.9	3	1	1	4	4	4	3	Glucose	inhibited	division	protein	A
NAD_binding_7	PF13241.6	gi|429217481|ref|YP_007175471.1|	-	0.0017	18.8	0.1	0.83	10.1	0.0	2.3	2	0	0	2	2	2	2	Putative	NAD(P)-binding
Thi4	PF01946.17	gi|429217481|ref|YP_007175471.1|	-	0.0023	17.2	0.6	0.042	13.1	0.1	2.4	2	0	0	2	2	2	1	Thi4	family
Trp_halogenase	PF04820.14	gi|429217481|ref|YP_007175471.1|	-	0.0048	15.8	0.6	0.11	11.3	0.1	2.1	2	0	0	2	2	2	1	Tryptophan	halogenase
K_oxygenase	PF13434.6	gi|429217481|ref|YP_007175471.1|	-	0.0065	15.6	0.2	2.6	7.1	0.0	2.9	2	1	1	3	3	3	1	L-lysine	6-monooxygenase	(NADPH-requiring)
AlaDh_PNT_C	PF01262.21	gi|429217481|ref|YP_007175471.1|	-	0.013	14.8	0.1	1.9	7.8	0.0	2.4	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
NAD_binding_8	PF13450.6	gi|429217481|ref|YP_007175471.1|	-	0.049	13.9	0.8	0.36	11.1	0.0	2.4	2	0	0	2	2	2	0	NAD(P)-binding	Rossmann-like	domain
DAO	PF01266.24	gi|429217481|ref|YP_007175471.1|	-	0.13	11.8	0.1	0.13	11.8	0.1	2.5	3	2	1	4	4	4	0	FAD	dependent	oxidoreductase
Lycopene_cycl	PF05834.12	gi|429217481|ref|YP_007175471.1|	-	0.22	10.5	1.7	1.4	7.8	0.0	2.5	2	1	1	3	3	3	0	Lycopene	cyclase	protein
Wyosine_form	PF08608.12	gi|429217482|ref|YP_007175472.1|	-	4.1e-23	81.5	0.1	1.2e-22	80.0	0.0	1.8	2	0	0	2	2	2	1	Wyosine	base	formation
Radical_SAM	PF04055.21	gi|429217482|ref|YP_007175472.1|	-	2.9e-19	70.0	0.2	4e-18	66.4	0.1	2.4	1	1	1	2	2	2	1	Radical	SAM	superfamily
NRBF2	PF08961.10	gi|429217483|ref|YP_007175473.1|	-	0.14	11.7	0.0	0.18	11.4	0.0	1.1	1	0	0	1	1	1	0	Nuclear	receptor-binding	factor	2,	autophagy	regulator
Zn_ribbon_SprT	PF17283.2	gi|429217485|ref|YP_007175475.1|	-	7.5e-05	22.6	6.6	0.14	12.1	0.2	3.2	3	0	0	3	3	3	2	SprT-like	zinc	ribbon	domain
zf-ribbon_3	PF13248.6	gi|429217485|ref|YP_007175475.1|	-	0.00017	20.9	4.2	0.05	13.0	0.1	3.3	3	0	0	3	3	3	1	zinc-ribbon	domain
zinc_ribbon_10	PF10058.9	gi|429217485|ref|YP_007175475.1|	-	0.00026	20.7	3.1	0.00026	20.7	3.1	2.2	1	1	1	2	2	2	1	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
DZR	PF12773.7	gi|429217485|ref|YP_007175475.1|	-	0.0015	18.5	6.1	0.24	11.4	4.8	2.4	1	1	1	2	2	2	2	Double	zinc	ribbon
zinc-ribbons_6	PF07191.12	gi|429217485|ref|YP_007175475.1|	-	0.0021	18.0	3.8	0.054	13.5	3.8	2.4	1	1	0	1	1	1	1	zinc-ribbons
zf-LITAF-like	PF10601.9	gi|429217485|ref|YP_007175475.1|	-	0.0025	18.0	5.9	0.21	11.9	0.4	2.9	2	1	1	3	3	3	1	LITAF-like	zinc	ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|429217485|ref|YP_007175475.1|	-	0.0063	16.0	3.3	0.031	13.8	1.2	2.3	2	1	0	2	2	2	1	TFIIB	zinc-binding
tRNA-synt_1f	PF01921.18	gi|429217485|ref|YP_007175475.1|	-	0.007	15.3	0.2	0.0086	15.0	0.2	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(K)
C1_2	PF03107.16	gi|429217485|ref|YP_007175475.1|	-	0.0092	16.3	5.2	1.4	9.3	1.4	2.5	1	1	1	2	2	2	2	C1	domain
Nudix_N_2	PF14803.6	gi|429217485|ref|YP_007175475.1|	-	0.012	15.5	1.9	0.012	15.5	1.9	2.1	2	0	0	2	2	2	0	Nudix	N-terminal
Zn-ribbon_8	PF09723.10	gi|429217485|ref|YP_007175475.1|	-	0.013	15.6	7.2	0.064	13.4	3.5	2.4	1	1	1	2	2	2	0	Zinc	ribbon	domain
Herpes_UL49_1	PF03117.14	gi|429217485|ref|YP_007175475.1|	-	0.014	14.7	0.8	0.014	14.7	0.8	1.1	1	0	0	1	1	1	0	UL49	family
DUF3268	PF11672.8	gi|429217485|ref|YP_007175475.1|	-	0.017	15.5	4.6	1.1	9.6	1.4	2.2	2	0	0	2	2	2	0	zinc-finger-containing	domain
zf-H2C2_2	PF13465.6	gi|429217485|ref|YP_007175475.1|	-	0.019	15.4	5.1	1.5	9.4	0.1	2.9	3	0	0	3	3	2	0	Zinc-finger	double	domain
HypA	PF01155.19	gi|429217485|ref|YP_007175475.1|	-	0.021	14.9	4.6	0.23	11.5	4.6	2.0	1	1	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zf-CSL	PF05207.13	gi|429217485|ref|YP_007175475.1|	-	0.031	14.0	4.8	0.05	13.3	0.6	2.1	1	1	1	2	2	2	0	CSL	zinc	finger
PhnA_Zn_Ribbon	PF08274.12	gi|429217485|ref|YP_007175475.1|	-	0.035	14.0	0.5	4.9	7.2	0.0	2.4	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
DUF1272	PF06906.11	gi|429217485|ref|YP_007175475.1|	-	0.042	14.0	4.5	2	8.5	4.5	2.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1272)
zf-RING_7	PF02591.15	gi|429217485|ref|YP_007175475.1|	-	0.042	14.0	4.1	7.1	6.9	0.0	3.2	3	0	0	3	3	3	0	C4-type	zinc	ribbon	domain
zf-Di19	PF05605.12	gi|429217485|ref|YP_007175475.1|	-	0.052	13.8	7.1	0.16	12.3	0.1	2.9	2	1	0	2	2	2	0	Drought	induced	19	protein	(Di19),	zinc-binding
zf-C4_Topoisom	PF01396.19	gi|429217485|ref|YP_007175475.1|	-	0.069	12.9	2.5	3.5	7.5	0.0	2.5	3	0	0	3	3	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
Cys_rich_CPXG	PF14255.6	gi|429217485|ref|YP_007175475.1|	-	0.076	12.9	6.4	0.28	11.1	0.2	2.6	2	1	0	2	2	2	0	Cysteine-rich	CPXCG
zinc_ribbon_5	PF13719.6	gi|429217485|ref|YP_007175475.1|	-	0.077	12.8	1.4	5	7.0	0.0	3.0	3	0	0	3	3	3	0	zinc-ribbon	domain
zf_C2H2_10	PF18414.1	gi|429217485|ref|YP_007175475.1|	-	0.079	12.5	3.6	0.56	9.8	0.4	2.3	2	0	0	2	2	2	0	C2H2	type	zinc-finger
Ribosomal_S27e	PF01667.17	gi|429217485|ref|YP_007175475.1|	-	0.094	12.4	4.1	22	4.9	0.0	3.0	2	1	0	3	3	3	0	Ribosomal	protein	S27
FYVE	PF01363.21	gi|429217485|ref|YP_007175475.1|	-	0.095	12.8	8.5	0.076	13.2	1.5	2.1	1	1	1	2	2	2	0	FYVE	zinc	finger
zf-IS66	PF13005.7	gi|429217485|ref|YP_007175475.1|	-	0.12	12.8	7.6	5.5	7.5	0.9	3.0	3	0	0	3	3	3	0	zinc-finger	binding	domain	of	transposase	IS66
CpXC	PF14353.6	gi|429217485|ref|YP_007175475.1|	-	0.15	12.1	4.7	1	9.4	0.1	2.7	2	1	1	3	3	3	0	CpXC	protein
PyrI_C	PF02748.15	gi|429217485|ref|YP_007175475.1|	-	0.15	11.9	5.7	2.1	8.3	3.2	2.8	2	1	1	3	3	3	0	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
zf-Sec23_Sec24	PF04810.15	gi|429217485|ref|YP_007175475.1|	-	0.17	11.9	7.8	0.21	11.7	1.7	2.2	2	0	0	2	2	2	0	Sec23/Sec24	zinc	finger
Zn_ribbon_recom	PF13408.6	gi|429217485|ref|YP_007175475.1|	-	0.21	12.1	6.7	3.4	8.3	3.1	2.3	1	1	1	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
zf-C2H2_4	PF13894.6	gi|429217485|ref|YP_007175475.1|	-	0.22	12.5	7.7	12	7.0	0.1	3.4	3	0	0	3	3	3	0	C2H2-type	zinc	finger
zf-BED	PF02892.15	gi|429217485|ref|YP_007175475.1|	-	0.26	11.3	9.2	1.2	9.2	0.5	2.8	1	1	2	3	3	3	0	BED	zinc	finger
zf-C4_ClpX	PF06689.13	gi|429217485|ref|YP_007175475.1|	-	0.26	11.2	2.9	21	5.1	0.0	3.0	2	1	0	2	2	2	0	ClpX	C4-type	zinc	finger
DUF35_N	PF12172.8	gi|429217485|ref|YP_007175475.1|	-	0.27	11.2	5.3	2.4	8.1	0.1	3.1	3	0	0	3	3	3	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-C2HC5	PF06221.13	gi|429217485|ref|YP_007175475.1|	-	0.28	11.2	5.2	0.18	11.8	1.8	2.2	1	1	1	2	2	2	0	Putative	zinc	finger	motif,	C2HC5-type
Zn_Tnp_IS1595	PF12760.7	gi|429217485|ref|YP_007175475.1|	-	0.32	11.0	11.2	0.18	11.8	6.0	2.6	1	1	2	3	3	3	0	Transposase	zinc-ribbon	domain
Acetone_carb_G	PF08882.11	gi|429217485|ref|YP_007175475.1|	-	0.43	10.7	2.9	15	5.8	0.3	2.3	1	1	1	2	2	2	0	Acetone	carboxylase	gamma	subunit
DNA_ligase_ZBD	PF03119.16	gi|429217485|ref|YP_007175475.1|	-	0.5	10.4	0.4	0.5	10.4	0.4	2.9	3	1	1	4	4	3	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf_UBZ	PF18439.1	gi|429217485|ref|YP_007175475.1|	-	0.51	10.0	5.2	15	5.3	0.4	3.3	3	0	0	3	3	3	0	Ubiquitin-Binding	Zinc	Finger
zf-Mss51	PF13824.6	gi|429217485|ref|YP_007175475.1|	-	0.52	10.4	8.4	1.6	8.8	4.3	2.7	1	1	2	3	3	3	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
FANCL_C	PF11793.8	gi|429217485|ref|YP_007175475.1|	-	0.6	10.3	5.9	8.1	6.7	0.1	2.9	2	1	1	3	3	3	0	FANCL	C-terminal	domain
zf-C3HC4_3	PF13920.6	gi|429217485|ref|YP_007175475.1|	-	0.61	10.0	9.5	29	4.6	9.5	2.8	1	1	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
zinc_ribbon_2	PF13240.6	gi|429217485|ref|YP_007175475.1|	-	0.62	9.9	12.1	0.85	9.4	0.5	3.5	3	1	1	4	4	4	0	zinc-ribbon	domain
DUF1610	PF07754.11	gi|429217485|ref|YP_007175475.1|	-	0.72	9.9	5.7	1	9.4	0.1	2.5	3	0	0	3	3	2	0	Domain	of	unknown	function	(DUF1610)
DiS_P_DiS	PF06750.13	gi|429217485|ref|YP_007175475.1|	-	0.88	9.7	6.2	2.6	8.2	1.6	2.8	1	1	1	2	2	2	0	Bacterial	Peptidase	A24	N-terminal	domain
RNHCP	PF12647.7	gi|429217485|ref|YP_007175475.1|	-	0.9	9.6	7.0	1	9.4	2.7	2.3	1	1	2	3	3	3	0	RNHCP	domain
DUF2757	PF10955.8	gi|429217485|ref|YP_007175475.1|	-	1.1	9.5	6.8	12	6.2	0.3	2.9	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2757)
zf-C2H2	PF00096.26	gi|429217485|ref|YP_007175475.1|	-	1.7	9.2	6.9	26	5.5	0.3	3.2	3	0	0	3	3	3	0	Zinc	finger,	C2H2	type
zf-ISL3	PF14690.6	gi|429217485|ref|YP_007175475.1|	-	2.4	8.9	10.4	2.4	8.9	0.1	3.1	2	1	1	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
CEBP_ZZ	PF16366.5	gi|429217485|ref|YP_007175475.1|	-	2.8	8.3	10.1	7	7.0	10.1	1.8	1	1	0	1	1	1	0	Cytoplasmic	polyadenylation	element-binding	protein	ZZ	domain
Desulfoferrod_N	PF06397.12	gi|429217485|ref|YP_007175475.1|	-	2.8	7.6	8.2	10	5.8	0.0	3.4	3	1	1	4	4	4	0	Desulfoferrodoxin,	N-terminal	domain
zinc_ribbon_9	PF14369.6	gi|429217485|ref|YP_007175475.1|	-	7	7.0	8.8	10	6.5	0.6	2.7	2	2	0	2	2	2	0	zinc-ribbon
Terminase_GpA	PF05876.12	gi|429217485|ref|YP_007175475.1|	-	7.2	5.0	5.9	1.5	7.3	0.6	1.9	1	1	1	2	2	2	0	Phage	terminase	large	subunit	(GpA)
PNP_UDP_1	PF01048.20	gi|429217487|ref|YP_007175477.1|	-	1.5e-38	132.4	0.0	1.8e-38	132.1	0.0	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
Lactamase_B_2	PF12706.7	gi|429217488|ref|YP_007175478.1|	-	3.1e-06	26.9	0.0	7e-06	25.7	0.0	1.5	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
RMMBL	PF07521.12	gi|429217488|ref|YP_007175478.1|	-	6.9e-05	22.7	0.1	0.006	16.5	0.0	2.4	2	0	0	2	2	2	1	Zn-dependent	metallo-hydrolase	RNA	specificity	domain
Lactamase_B	PF00753.27	gi|429217488|ref|YP_007175478.1|	-	0.0021	18.1	0.1	0.0043	17.1	0.1	1.4	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
DRMBL	PF07522.14	gi|429217488|ref|YP_007175478.1|	-	0.011	15.9	0.0	0.022	14.9	0.0	1.5	1	0	0	1	1	1	0	DNA	repair	metallo-beta-lactamase
DUF4974	PF16344.5	gi|429217488|ref|YP_007175478.1|	-	0.44	10.6	0.0	0.44	10.6	0.0	2.6	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF4974)
DUF1129	PF06570.11	gi|429217489|ref|YP_007175479.1|	-	0.064	12.7	6.3	0.087	12.3	6.3	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1129)
PIG-F	PF06699.11	gi|429217489|ref|YP_007175479.1|	-	1.2	9.3	6.8	1.6	8.9	6.1	1.5	1	1	0	1	1	1	0	GPI	biosynthesis	protein	family	Pig-F
FdhE	PF04216.12	gi|429217490|ref|YP_007175480.1|	-	2.4e-13	50.6	0.1	2.9e-13	50.4	0.1	1.1	1	0	0	1	1	1	1	Protein	involved	in	formate	dehydrogenase	formation
TF_Zn_Ribbon	PF08271.12	gi|429217490|ref|YP_007175480.1|	-	4.4e-06	26.1	5.2	0.00084	18.8	1.2	3.0	3	0	0	3	3	3	1	TFIIB	zinc-binding
Prim_Zn_Ribbon	PF08273.12	gi|429217490|ref|YP_007175480.1|	-	5.7e-05	23.3	9.9	0.00033	20.9	1.0	2.6	2	1	0	2	2	2	1	Zinc-binding	domain	of	primase-helicase
DZR	PF12773.7	gi|429217490|ref|YP_007175480.1|	-	5.8e-05	23.0	5.7	0.00044	20.2	3.7	2.2	2	0	0	2	2	2	1	Double	zinc	ribbon
Lar_restr_allev	PF14354.6	gi|429217490|ref|YP_007175480.1|	-	0.00012	22.3	6.8	0.015	15.6	1.7	2.3	1	1	1	2	2	2	2	Restriction	alleviation	protein	Lar
zf-NADH-PPase	PF09297.11	gi|429217490|ref|YP_007175480.1|	-	0.00013	21.5	2.2	0.0015	18.1	0.4	2.7	2	1	0	2	2	2	1	NADH	pyrophosphatase	zinc	ribbon	domain
Elf1	PF05129.13	gi|429217490|ref|YP_007175480.1|	-	0.00046	20.2	5.1	0.027	14.5	0.1	2.3	1	1	1	2	2	2	2	Transcription	elongation	factor	Elf1	like
zf-C3HC4_3	PF13920.6	gi|429217490|ref|YP_007175480.1|	-	0.00068	19.4	6.3	0.00083	19.2	3.0	2.1	2	0	0	2	2	2	1	Zinc	finger,	C3HC4	type	(RING	finger)
Zn-ribbon_8	PF09723.10	gi|429217490|ref|YP_007175480.1|	-	0.0018	18.4	7.3	0.78	9.9	2.3	3.1	3	0	0	3	3	3	2	Zinc	ribbon	domain
HypA	PF01155.19	gi|429217490|ref|YP_007175480.1|	-	0.0022	18.0	7.7	0.0064	16.5	0.6	3.2	1	1	2	3	3	3	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Nudix_N_2	PF14803.6	gi|429217490|ref|YP_007175480.1|	-	0.0038	17.1	4.3	0.031	14.2	0.3	3.1	3	0	0	3	3	3	1	Nudix	N-terminal
Zn_Tnp_IS1595	PF12760.7	gi|429217490|ref|YP_007175480.1|	-	0.0065	16.4	9.0	0.43	10.6	0.6	3.0	1	1	2	3	3	3	2	Transposase	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.11	gi|429217490|ref|YP_007175480.1|	-	0.015	15.2	1.8	0.015	15.2	1.8	3.0	2	1	2	4	4	4	0	Putative	transposase	DNA-binding	domain
Cys_rich_KTR	PF14205.6	gi|429217490|ref|YP_007175480.1|	-	0.029	14.2	8.5	1.3	8.9	1.7	2.9	2	1	0	2	2	2	0	Cysteine-rich	KTR
Prok-RING_1	PF14446.6	gi|429217490|ref|YP_007175480.1|	-	0.074	13.0	6.4	0.29	11.1	1.3	3.0	3	0	0	3	3	3	0	Prokaryotic	RING	finger	family	1
Cys_rich_CPXG	PF14255.6	gi|429217490|ref|YP_007175480.1|	-	0.08	12.9	5.0	3.8	7.5	0.0	3.2	3	1	0	3	3	3	0	Cysteine-rich	CPXCG
SpoVIF	PF14069.6	gi|429217490|ref|YP_007175480.1|	-	0.091	12.5	1.4	0.29	10.9	1.4	1.8	1	1	0	1	1	1	0	Stage	VI	sporulation	protein	F
PriA_CRR	PF18319.1	gi|429217490|ref|YP_007175480.1|	-	0.093	12.8	0.1	0.093	12.8	0.1	2.8	4	0	0	4	4	2	0	PriA	DNA	helicase	Cys-rich	region	(CRR)	domain
zinc_ribbon_15	PF17032.5	gi|429217490|ref|YP_007175480.1|	-	0.29	11.9	9.4	1.3	9.9	9.5	2.1	1	1	0	1	1	1	0	zinc-ribbon	family
HSP33	PF01430.19	gi|429217490|ref|YP_007175480.1|	-	0.39	10.1	0.1	0.39	10.1	0.1	2.0	3	0	0	3	3	3	0	Hsp33	protein
zinc_ribbon_9	PF14369.6	gi|429217490|ref|YP_007175480.1|	-	0.46	10.8	8.5	0.57	10.5	1.6	3.0	3	0	0	3	3	3	0	zinc-ribbon
zinc_ribbon_2	PF13240.6	gi|429217490|ref|YP_007175480.1|	-	0.55	10.0	17.9	1.2	9.0	0.2	4.2	3	1	1	4	4	4	0	zinc-ribbon	domain
eIF-5_eIF-2B	PF01873.17	gi|429217490|ref|YP_007175480.1|	-	0.56	10.1	8.4	0.9	9.4	0.6	2.7	3	0	0	3	3	3	0	Domain	found	in	IF2B/IF5
zf-ribbon_3	PF13248.6	gi|429217490|ref|YP_007175480.1|	-	0.61	9.6	16.0	3.9	7.0	6.6	3.7	3	1	0	3	3	3	0	zinc-ribbon	domain
DUF2318	PF10080.9	gi|429217490|ref|YP_007175480.1|	-	0.66	10.1	8.7	0.26	11.4	1.3	2.8	1	1	2	3	3	3	0	Predicted	membrane	protein	(DUF2318)
NOB1_Zn_bind	PF08772.11	gi|429217490|ref|YP_007175480.1|	-	0.69	10.1	14.2	0.091	12.9	2.2	3.2	1	1	2	3	3	3	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
DUF3268	PF11672.8	gi|429217490|ref|YP_007175480.1|	-	1	9.7	6.4	0.98	9.8	0.1	2.9	1	1	2	3	3	3	0	zinc-finger-containing	domain
zf-RING_2	PF13639.6	gi|429217490|ref|YP_007175480.1|	-	1	9.7	9.1	5.1	7.5	5.6	2.5	2	1	0	2	2	2	0	Ring	finger	domain
DnaJ_CXXCXGXG	PF00684.19	gi|429217490|ref|YP_007175480.1|	-	1.6	9.1	6.0	1.9	8.9	3.5	2.1	2	0	0	2	2	2	0	DnaJ	central	domain
zinc-ribbons_6	PF07191.12	gi|429217490|ref|YP_007175480.1|	-	2.2	8.4	8.5	23	5.1	8.4	2.3	1	1	0	1	1	1	0	zinc-ribbons
Prok-RING_4	PF14447.6	gi|429217490|ref|YP_007175480.1|	-	2.3	8.1	8.1	5.5	6.9	0.7	3.0	3	0	0	3	3	3	0	Prokaryotic	RING	finger	family	4
zf-trcl	PF13451.6	gi|429217490|ref|YP_007175480.1|	-	3.3	7.7	7.1	2.6	8.0	0.0	3.3	4	0	0	4	4	4	0	Probable	zinc-ribbon	domain
A2L_zn_ribbon	PF08792.10	gi|429217490|ref|YP_007175480.1|	-	3.5	7.4	16.4	23	4.9	4.2	3.9	2	2	1	3	3	3	0	A2L	zinc	ribbon	domain
zf-Di19	PF05605.12	gi|429217490|ref|YP_007175480.1|	-	3.9	7.8	7.9	13	6.2	0.4	2.7	1	1	0	2	2	2	0	Drought	induced	19	protein	(Di19),	zinc-binding
FYVE	PF01363.21	gi|429217490|ref|YP_007175480.1|	-	4.1	7.6	8.1	31	4.8	0.5	2.8	1	1	1	2	2	2	0	FYVE	zinc	finger
DNA_ligase_ZBD	PF03119.16	gi|429217490|ref|YP_007175480.1|	-	4.6	7.3	6.5	1.2	9.3	0.7	2.4	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-RRN7	PF11781.8	gi|429217490|ref|YP_007175480.1|	-	5.3	6.8	11.6	2.2	8.0	0.1	3.5	4	0	0	4	4	4	0	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
zf-Mss51	PF13824.6	gi|429217490|ref|YP_007175480.1|	-	6.5	6.9	7.0	62	3.8	7.1	2.2	1	1	0	1	1	1	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
zf-C3HC4_2	PF13923.6	gi|429217490|ref|YP_007175480.1|	-	7.8	6.4	9.6	37	4.3	5.8	2.5	2	1	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
TFIIS_C	PF01096.18	gi|429217490|ref|YP_007175480.1|	-	8.6	6.3	15.6	1.9	8.4	2.3	3.7	3	1	0	3	3	3	0	Transcription	factor	S-II	(TFIIS)
ETF	PF01012.21	gi|429217491|ref|YP_007175481.1|	-	4.1e-36	124.6	0.0	6.4e-36	123.9	0.0	1.3	1	0	0	1	1	1	1	Electron	transfer	flavoprotein	domain
ETF_alpha	PF00766.19	gi|429217491|ref|YP_007175481.1|	-	6.1e-33	112.7	0.4	1.1e-32	111.8	0.4	1.5	1	0	0	1	1	1	1	Electron	transfer	flavoprotein	FAD-binding	domain
ETF	PF01012.21	gi|429217492|ref|YP_007175482.1|	-	2e-35	122.4	0.0	2.4e-35	122.1	0.0	1.1	1	0	0	1	1	1	1	Electron	transfer	flavoprotein	domain
Fer4_7	PF12838.7	gi|429217493|ref|YP_007175483.1|	-	6.3e-08	33.1	8.1	0.00013	22.5	0.9	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|429217493|ref|YP_007175483.1|	-	1.9e-07	30.7	13.6	0.0018	18.3	4.0	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
ETF_QO	PF05187.13	gi|429217493|ref|YP_007175483.1|	-	3.4e-06	27.1	5.9	5e-06	26.6	5.9	1.5	1	1	0	1	1	1	1	Electron	transfer	flavoprotein-ubiquinone	oxidoreductase,	4Fe-4S
Fer4_9	PF13187.6	gi|429217493|ref|YP_007175483.1|	-	3.5e-06	27.1	12.3	5.8e-06	26.4	12.3	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|429217493|ref|YP_007175483.1|	-	2.3e-05	24.0	3.9	2.3e-05	24.0	3.9	3.2	3	0	0	3	3	3	1	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|429217493|ref|YP_007175483.1|	-	0.00059	19.9	14.8	0.0038	17.3	2.1	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_11	PF13247.6	gi|429217493|ref|YP_007175483.1|	-	0.00078	19.5	5.8	0.0011	19.0	5.8	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|429217493|ref|YP_007175483.1|	-	0.00083	19.8	5.0	0.0078	16.7	0.2	2.3	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|429217493|ref|YP_007175483.1|	-	0.0026	18.1	2.6	0.0026	18.1	2.6	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|429217493|ref|YP_007175483.1|	-	0.0038	17.3	17.6	0.049	13.7	3.1	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|429217493|ref|YP_007175483.1|	-	0.0039	17.6	5.7	0.012	16.1	0.5	2.3	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|429217493|ref|YP_007175483.1|	-	0.0097	16.8	1.3	0.0097	16.8	1.3	2.6	2	1	1	3	3	3	1	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.6	gi|429217493|ref|YP_007175483.1|	-	0.11	12.6	15.4	1.4	9.1	15.8	2.0	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|429217493|ref|YP_007175483.1|	-	4.4	7.9	11.2	0.63	10.6	2.1	2.5	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
DAO	PF01266.24	gi|429217494|ref|YP_007175484.1|	-	2.4e-13	50.4	3.1	2.1e-06	27.5	0.6	2.7	1	1	0	2	2	2	2	FAD	dependent	oxidoreductase
Thi4	PF01946.17	gi|429217494|ref|YP_007175484.1|	-	8.9e-11	41.5	0.9	4.2e-09	36.0	0.0	2.6	2	1	0	2	2	2	1	Thi4	family
NAD_binding_8	PF13450.6	gi|429217494|ref|YP_007175484.1|	-	5.7e-09	36.1	0.2	1.7e-08	34.6	0.2	1.8	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_oxidored	PF12831.7	gi|429217494|ref|YP_007175484.1|	-	1.3e-08	34.6	0.1	2.3e-08	33.8	0.1	1.4	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.14	gi|429217494|ref|YP_007175484.1|	-	7.9e-08	31.9	0.7	2e-06	27.3	0.0	2.2	1	1	1	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.19	gi|429217494|ref|YP_007175484.1|	-	2.5e-07	30.3	0.1	2e-06	27.3	0.1	2.3	3	0	0	3	3	3	1	FAD	binding	domain
HI0933_like	PF03486.14	gi|429217494|ref|YP_007175484.1|	-	1.7e-06	27.0	4.8	2.5e-06	26.5	2.4	2.2	2	1	0	2	2	2	1	HI0933-like	protein
FAD_binding_2	PF00890.24	gi|429217494|ref|YP_007175484.1|	-	4.2e-06	26.1	1.2	5.6e-05	22.4	0.3	2.1	2	0	0	2	2	2	1	FAD	binding	domain
GIDA	PF01134.22	gi|429217494|ref|YP_007175484.1|	-	5e-06	25.9	0.8	1.6e-05	24.2	0.8	1.8	1	1	0	1	1	1	1	Glucose	inhibited	division	protein	A
Lycopene_cycl	PF05834.12	gi|429217494|ref|YP_007175484.1|	-	3.7e-05	22.9	0.3	0.00028	20.1	0.2	2.2	2	1	0	2	2	2	1	Lycopene	cyclase	protein
Trp_halogenase	PF04820.14	gi|429217494|ref|YP_007175484.1|	-	5.4e-05	22.2	0.2	0.089	11.6	0.2	2.1	2	0	0	2	2	2	2	Tryptophan	halogenase
Pyr_redox	PF00070.27	gi|429217494|ref|YP_007175484.1|	-	0.00014	22.4	3.5	0.015	15.8	0.1	3.6	2	1	1	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|429217494|ref|YP_007175484.1|	-	0.0011	18.2	0.5	0.0011	18.2	0.5	1.5	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
GDI	PF00996.18	gi|429217494|ref|YP_007175484.1|	-	0.0032	16.0	0.1	0.49	8.9	0.0	2.2	1	1	1	2	2	2	2	GDP	dissociation	inhibitor
NAD_binding_9	PF13454.6	gi|429217494|ref|YP_007175484.1|	-	0.028	14.4	0.1	0.064	13.3	0.1	1.7	1	1	0	1	1	1	0	FAD-NAD(P)-binding
ApbA	PF02558.16	gi|429217494|ref|YP_007175484.1|	-	0.036	13.7	0.0	0.062	12.9	0.0	1.4	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
3HCDH_N	PF02737.18	gi|429217494|ref|YP_007175484.1|	-	0.053	13.4	0.1	0.15	12.0	0.1	1.7	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
eIF-5_eIF-2B	PF01873.17	gi|429217495|ref|YP_007175485.1|	-	3.5e-31	107.5	0.0	4.4e-31	107.2	0.0	1.1	1	0	0	1	1	1	1	Domain	found	in	IF2B/IF5
Lar_restr_allev	PF14354.6	gi|429217495|ref|YP_007175485.1|	-	0.0053	17.1	0.5	0.0082	16.5	0.5	1.3	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
BTB_3	PF16017.5	gi|429217495|ref|YP_007175485.1|	-	0.0066	16.5	0.0	0.0095	16.0	0.0	1.2	1	0	0	1	1	1	1	BTB/POZ	domain
Zn-ribbon_8	PF09723.10	gi|429217495|ref|YP_007175485.1|	-	0.012	15.8	0.0	1.2	9.3	0.0	2.3	2	0	0	2	2	2	0	Zinc	ribbon	domain
HTH_38	PF13936.6	gi|429217495|ref|YP_007175485.1|	-	0.016	14.9	0.0	0.041	13.7	0.0	1.7	2	0	0	2	2	2	0	Helix-turn-helix	domain
zf-ribbon_3	PF13248.6	gi|429217495|ref|YP_007175485.1|	-	0.017	14.5	1.2	0.31	10.5	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-TFIIB	PF13453.6	gi|429217495|ref|YP_007175485.1|	-	0.022	14.1	3.1	0.028	13.8	0.6	2.1	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
DUF35_N	PF12172.8	gi|429217495|ref|YP_007175485.1|	-	0.024	14.5	1.0	0.99	9.4	0.1	2.2	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
RNA_POL_M_15KD	PF02150.16	gi|429217495|ref|YP_007175485.1|	-	0.024	14.5	0.6	0.25	11.2	0.5	2.2	1	1	1	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
Elf1	PF05129.13	gi|429217495|ref|YP_007175485.1|	-	0.048	13.7	0.2	0.077	13.0	0.2	1.3	1	0	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
Rubredoxin_2	PF18073.1	gi|429217495|ref|YP_007175485.1|	-	0.089	12.5	1.6	10	6.0	0.4	2.2	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
Ribosomal_S27e	PF01667.17	gi|429217495|ref|YP_007175485.1|	-	0.094	12.4	0.3	0.18	11.6	0.3	1.5	1	0	0	1	1	1	0	Ribosomal	protein	S27
OrfB_Zn_ribbon	PF07282.11	gi|429217495|ref|YP_007175485.1|	-	0.1	12.5	0.3	0.19	11.7	0.3	1.4	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
zf-RING_7	PF02591.15	gi|429217495|ref|YP_007175485.1|	-	0.17	12.1	2.4	4.4	7.6	0.3	2.6	2	1	0	2	2	2	0	C4-type	zinc	ribbon	domain
zinc_ribbon_5	PF13719.6	gi|429217495|ref|YP_007175485.1|	-	0.19	11.5	1.1	21	4.9	0.1	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
PhnA_Zn_Ribbon	PF08274.12	gi|429217495|ref|YP_007175485.1|	-	0.19	11.7	1.7	1.3	9.0	1.7	2.0	1	1	0	1	1	1	0	PhnA	Zinc-Ribbon
zf-NADH-PPase	PF09297.11	gi|429217495|ref|YP_007175485.1|	-	0.2	11.4	3.5	1.2	8.8	3.5	2.0	1	1	0	1	1	1	0	NADH	pyrophosphatase	zinc	ribbon	domain
zf-FPG_IleRS	PF06827.14	gi|429217495|ref|YP_007175485.1|	-	0.24	11.3	0.6	0.24	11.3	0.6	1.7	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
zf-ACC	PF17848.1	gi|429217495|ref|YP_007175485.1|	-	0.61	10.2	2.5	8.1	6.6	0.1	2.5	2	0	0	2	2	2	0	Acetyl-coA	carboxylase	zinc	finger	domain
Radical_SAM	PF04055.21	gi|429217496|ref|YP_007175486.1|	-	2.9e-12	47.3	0.5	7.1e-12	46.0	0.1	1.8	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|429217496|ref|YP_007175486.1|	-	4.3e-09	36.8	0.1	1.1e-08	35.5	0.0	1.7	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|429217496|ref|YP_007175486.1|	-	9.1e-06	25.8	0.0	2e-05	24.7	0.0	1.6	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Acetyltransf_1	PF00583.25	gi|429217497|ref|YP_007175487.1|	-	4.7e-23	81.6	0.0	6.7e-23	81.2	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.7	gi|429217497|ref|YP_007175487.1|	-	7.8e-15	55.1	0.1	5.7e-14	52.3	0.1	2.0	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.7	gi|429217497|ref|YP_007175487.1|	-	3.4e-14	52.9	0.1	9.4e-13	48.2	0.1	2.2	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.10	gi|429217497|ref|YP_007175487.1|	-	7.2e-09	35.5	0.0	1.1e-08	34.9	0.0	1.3	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_9	PF13527.7	gi|429217497|ref|YP_007175487.1|	-	1.4e-08	34.9	0.0	1.6e-07	31.5	0.0	2.3	2	2	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_15	PF17013.5	gi|429217497|ref|YP_007175487.1|	-	6.3e-08	32.3	0.8	7.6e-08	32.1	0.8	1.2	1	0	0	1	1	1	1	Putative	acetyl-transferase
Acetyltransf_4	PF13420.7	gi|429217497|ref|YP_007175487.1|	-	1.1e-07	32.1	0.4	4.6e-06	26.8	0.1	2.3	1	1	1	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.6	gi|429217497|ref|YP_007175487.1|	-	1.7e-07	31.0	0.0	3.6e-07	30.0	0.0	1.7	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.7	gi|429217497|ref|YP_007175487.1|	-	0.00023	21.9	0.1	0.00056	20.6	0.1	1.8	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
GNAT_acetyltran	PF12746.7	gi|429217497|ref|YP_007175487.1|	-	0.016	14.7	0.0	0.025	14.2	0.0	1.3	1	0	0	1	1	1	0	GNAT	acetyltransferase
Acetyltransf_CG	PF14542.6	gi|429217497|ref|YP_007175487.1|	-	0.023	14.8	0.0	0.044	13.9	0.0	1.4	1	0	0	1	1	1	0	GCN5-related	N-acetyl-transferase
Acetyltransf_18	PF18014.1	gi|429217497|ref|YP_007175487.1|	-	0.05	13.4	0.0	0.19	11.6	0.0	1.8	2	0	0	2	2	2	0	Acetyltransferase	(GNAT)	domain
Acetyltransf_13	PF13880.6	gi|429217497|ref|YP_007175487.1|	-	0.088	12.8	0.0	0.15	12.1	0.0	1.3	1	0	0	1	1	1	0	ESCO1/2	acetyl-transferase
GCV_T_C	PF08669.11	gi|429217497|ref|YP_007175487.1|	-	0.12	12.3	0.0	0.26	11.2	0.0	1.5	2	0	0	2	2	1	0	Glycine	cleavage	T-protein	C-terminal	barrel	domain
DFP	PF04127.15	gi|429217498|ref|YP_007175488.1|	-	3.4e-47	160.7	0.1	3.1e-46	157.6	0.1	2.1	2	0	0	2	2	2	1	DNA	/	pantothenate	metabolism	flavoprotein
Flavoprotein	PF02441.19	gi|429217498|ref|YP_007175488.1|	-	2.7e-27	95.4	0.8	2.7e-27	95.4	0.8	2.2	2	1	0	2	2	2	1	Flavoprotein
Pyr_redox_3	PF13738.6	gi|429217498|ref|YP_007175488.1|	-	0.033	13.4	0.5	2	7.6	0.1	2.5	2	1	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_synthase	PF02540.17	gi|429217499|ref|YP_007175489.1|	-	4.2e-77	258.5	0.1	5e-77	258.3	0.1	1.0	1	0	0	1	1	1	1	NAD	synthase
tRNA_Me_trans	PF03054.16	gi|429217499|ref|YP_007175489.1|	-	2.3e-06	26.7	0.0	0.0014	17.5	0.0	2.2	2	0	0	2	2	2	2	tRNA	methyl	transferase
Asn_synthase	PF00733.21	gi|429217499|ref|YP_007175489.1|	-	0.00026	20.8	0.0	0.0003	20.6	0.0	1.1	1	0	0	1	1	1	1	Asparagine	synthase
QueC	PF06508.13	gi|429217499|ref|YP_007175489.1|	-	0.004	16.7	0.0	0.024	14.1	0.0	2.1	2	0	0	2	2	2	1	Queuosine	biosynthesis	protein	QueC
HTH_25	PF13413.6	gi|429217499|ref|YP_007175489.1|	-	0.012	15.5	0.0	1.3	9.0	0.0	2.6	2	0	0	2	2	2	0	Helix-turn-helix	domain
ATP_bind_3	PF01171.20	gi|429217499|ref|YP_007175489.1|	-	0.085	12.6	0.3	0.39	10.5	0.0	2.2	3	0	0	3	3	3	0	PP-loop	family
HTH_3	PF01381.22	gi|429217499|ref|YP_007175489.1|	-	0.13	12.3	0.1	7.2	6.7	0.0	2.8	3	0	0	3	3	3	0	Helix-turn-helix
Pox_TAA1	PF03295.14	gi|429217500|ref|YP_007175490.1|	-	0.0038	17.1	0.2	0.0089	15.9	0.2	1.6	1	0	0	1	1	1	1	Poxvirus	trans-activator	protein	A1	C-terminal
DUF3801	PF12687.7	gi|429217500|ref|YP_007175490.1|	-	0.019	15.1	2.9	0.091	12.8	0.3	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3801)
ABC_tran	PF00005.27	gi|429217501|ref|YP_007175491.1|	-	1.6e-29	103.2	0.0	2.4e-29	102.6	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|429217501|ref|YP_007175491.1|	-	9.8e-14	51.9	0.1	5.2e-07	29.8	0.0	2.1	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_13	PF13166.6	gi|429217501|ref|YP_007175491.1|	-	0.00019	20.3	0.2	0.033	12.8	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
AAA_23	PF13476.6	gi|429217501|ref|YP_007175491.1|	-	0.00023	21.7	0.5	0.00047	20.7	0.5	1.6	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.19	gi|429217501|ref|YP_007175491.1|	-	0.00034	20.1	0.1	0.46	9.9	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.6	gi|429217501|ref|YP_007175491.1|	-	0.0018	18.1	0.3	0.44	10.2	0.1	2.2	1	1	1	2	2	2	2	AAA	ATPase	domain
RsgA_GTPase	PF03193.16	gi|429217501|ref|YP_007175491.1|	-	0.0036	17.2	0.1	0.019	14.9	0.1	2.1	2	1	1	3	3	3	1	RsgA	GTPase
Rad17	PF03215.15	gi|429217501|ref|YP_007175491.1|	-	0.0061	16.5	0.1	0.1	12.5	0.0	2.1	1	1	1	2	2	2	1	Rad17	P-loop	domain
AAA_14	PF13173.6	gi|429217501|ref|YP_007175491.1|	-	0.0073	16.3	0.0	0.81	9.7	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
AAA_29	PF13555.6	gi|429217501|ref|YP_007175491.1|	-	0.0087	15.8	0.1	0.017	14.8	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
CLP1_P	PF16575.5	gi|429217501|ref|YP_007175491.1|	-	0.01	15.6	0.0	0.022	14.6	0.0	1.6	1	0	0	1	1	1	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
AAA_27	PF13514.6	gi|429217501|ref|YP_007175491.1|	-	0.011	15.3	0.0	0.024	14.2	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
CbiA	PF01656.23	gi|429217501|ref|YP_007175491.1|	-	0.022	14.8	0.0	0.028	14.5	0.0	1.3	1	0	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.6	gi|429217501|ref|YP_007175491.1|	-	0.03	14.2	0.0	0.084	12.8	0.0	2.0	1	1	0	1	1	1	0	AAA	domain
SRP54	PF00448.22	gi|429217501|ref|YP_007175491.1|	-	0.037	13.7	0.1	0.077	12.6	0.1	1.5	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA_30	PF13604.6	gi|429217501|ref|YP_007175491.1|	-	0.044	13.5	0.0	0.077	12.7	0.0	1.7	1	1	1	2	2	2	0	AAA	domain
Zeta_toxin	PF06414.12	gi|429217501|ref|YP_007175491.1|	-	0.072	12.4	0.0	0.12	11.6	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
AAA_25	PF13481.6	gi|429217501|ref|YP_007175491.1|	-	0.083	12.5	0.1	0.42	10.2	0.1	1.9	2	0	0	2	2	2	0	AAA	domain
AAA_22	PF13401.6	gi|429217501|ref|YP_007175491.1|	-	0.093	13.0	0.1	0.31	11.3	0.1	2.0	1	1	0	1	1	1	0	AAA	domain
Sortase	PF04203.13	gi|429217501|ref|YP_007175491.1|	-	0.13	12.1	0.0	16	5.3	0.0	2.3	2	0	0	2	2	2	0	Sortase	domain
TsaE	PF02367.17	gi|429217501|ref|YP_007175491.1|	-	0.15	12.1	0.1	0.3	11.1	0.1	1.5	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_16	PF13191.6	gi|429217501|ref|YP_007175491.1|	-	0.21	12.0	0.0	0.28	11.6	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
ABC2_membrane_2	PF12679.7	gi|429217502|ref|YP_007175492.1|	-	1.9e-19	70.0	30.0	4e-19	69.0	30.0	1.4	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_3	PF12698.7	gi|429217502|ref|YP_007175492.1|	-	6.6e-19	68.2	36.9	7.9e-19	68.0	36.9	1.1	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.7	gi|429217502|ref|YP_007175492.1|	-	3e-05	24.1	12.3	3e-05	24.1	12.3	3.2	2	1	1	3	3	3	2	ABC-2	family	transporter	protein
tRNA-synt_2b	PF00587.25	gi|429217503|ref|YP_007175493.1|	-	1.3e-32	113.2	0.0	2.5e-32	112.3	0.0	1.4	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
Seryl_tRNA_N	PF02403.22	gi|429217503|ref|YP_007175493.1|	-	1.2e-22	80.1	17.3	2.3e-22	79.3	17.3	1.4	1	0	0	1	1	1	1	Seryl-tRNA	synthetase	N-terminal	domain
Nmad5	PF18757.1	gi|429217503|ref|YP_007175493.1|	-	0.0058	16.9	4.2	0.013	15.7	4.2	1.5	1	0	0	1	1	1	1	Nucleotide	modification	associated	domain	5
AAA_13	PF13166.6	gi|429217503|ref|YP_007175493.1|	-	0.0065	15.2	5.9	0.012	14.3	5.9	1.3	1	0	0	1	1	1	1	AAA	domain
DUF3450	PF11932.8	gi|429217503|ref|YP_007175493.1|	-	0.028	13.8	3.2	0.051	12.9	3.2	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3450)
TMPIT	PF07851.13	gi|429217503|ref|YP_007175493.1|	-	0.028	13.7	4.2	0.04	13.2	4.2	1.2	1	0	0	1	1	1	0	TMPIT-like	protein
COG6	PF06419.11	gi|429217503|ref|YP_007175493.1|	-	0.03	12.6	9.1	0.042	12.1	9.1	1.1	1	0	0	1	1	1	0	Conserved	oligomeric	complex	COG6
Syntaxin-6_N	PF09177.11	gi|429217503|ref|YP_007175493.1|	-	0.047	14.2	3.3	0.1	13.1	3.3	1.6	1	0	0	1	1	1	0	Syntaxin	6,	N-terminal
PCRF	PF03462.18	gi|429217503|ref|YP_007175493.1|	-	0.12	12.3	4.9	0.22	11.3	4.9	1.4	1	0	0	1	1	1	0	PCRF	domain
CREPT	PF16566.5	gi|429217503|ref|YP_007175493.1|	-	0.19	11.9	5.3	0.37	11.0	5.3	1.4	1	0	0	1	1	1	0	Cell-cycle	alteration	and	expression-elevated	protein	in	tumour
PilO	PF04350.13	gi|429217503|ref|YP_007175493.1|	-	0.21	11.7	3.5	0.49	10.5	3.5	1.6	1	0	0	1	1	1	0	Pilus	assembly	protein,	PilO
MCU	PF04678.13	gi|429217503|ref|YP_007175493.1|	-	0.21	11.7	4.3	0.37	10.9	4.3	1.3	1	0	0	1	1	1	0	Mitochondrial	calcium	uniporter
YojJ	PF10372.9	gi|429217503|ref|YP_007175493.1|	-	0.29	11.3	4.4	1.7	8.8	0.2	2.6	2	0	0	2	2	2	0	Bacterial	membrane-spanning	protein	N-terminus
DUF5320	PF17253.2	gi|429217503|ref|YP_007175493.1|	-	0.46	11.6	2.7	1.5	10.0	2.7	1.9	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5320)
ISG65-75	PF11727.8	gi|429217503|ref|YP_007175493.1|	-	0.56	9.4	6.6	0.84	8.8	6.6	1.2	1	0	0	1	1	1	0	Invariant	surface	glycoprotein
BshC	PF10079.9	gi|429217503|ref|YP_007175493.1|	-	0.65	8.7	6.8	0.95	8.1	6.8	1.2	1	0	0	1	1	1	0	Bacillithiol	biosynthesis	BshC
AAA_23	PF13476.6	gi|429217503|ref|YP_007175493.1|	-	0.98	9.9	9.3	1.9	9.0	9.3	1.4	1	0	0	1	1	1	0	AAA	domain
PEX11	PF05648.14	gi|429217503|ref|YP_007175493.1|	-	2.8	7.4	4.6	15	4.9	0.1	2.3	2	0	0	2	2	2	0	Peroxisomal	biogenesis	factor	11	(PEX11)
FapA	PF03961.13	gi|429217503|ref|YP_007175493.1|	-	5.6	5.5	9.9	8.7	4.8	9.9	1.2	1	0	0	1	1	1	0	Flagellar	Assembly	Protein	A
Tho2	PF11262.8	gi|429217503|ref|YP_007175493.1|	-	6.7	5.8	7.7	20	4.2	5.0	2.1	2	0	0	2	2	2	0	Transcription	factor/nuclear	export	subunit	protein	2
YabA	PF06156.13	gi|429217503|ref|YP_007175493.1|	-	7.2	7.3	7.7	20	5.9	7.7	1.7	1	0	0	1	1	1	0	Initiation	control	protein	YabA
STT3	PF02516.14	gi|429217504|ref|YP_007175494.1|	-	1.6e-12	47.1	46.7	2.7e-12	46.4	46.7	1.5	1	0	0	1	1	1	1	Oligosaccharyl	transferase	STT3	subunit
DUF5626	PF18540.1	gi|429217504|ref|YP_007175494.1|	-	0.076	13.5	0.3	0.19	12.3	0.3	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5626)
DUF1206	PF06724.11	gi|429217504|ref|YP_007175494.1|	-	4.8	7.3	0.0	4.8	7.3	0.0	5.2	5	0	0	5	5	5	0	Domain	of	Unknown	Function	(DUF1206)
AA_kinase	PF00696.28	gi|429217505|ref|YP_007175495.1|	-	4e-32	111.7	0.0	5.3e-32	111.3	0.0	1.2	1	0	0	1	1	1	1	Amino	acid	kinase	family
Nre_N	PF04894.12	gi|429217507|ref|YP_007175497.1|	-	1.2e-99	333.6	0.0	1.5e-99	333.2	0.0	1.1	1	0	0	1	1	1	1	Archaeal	Nre,	N-terminal
Nre_C	PF04895.12	gi|429217507|ref|YP_007175497.1|	-	2.3e-29	101.5	0.0	4.7e-29	100.5	0.0	1.5	1	0	0	1	1	1	1	Archaeal	Nre,	C-terminal
RrnaAD	PF00398.20	gi|429217508|ref|YP_007175498.1|	-	6e-38	130.4	1.0	7.5e-38	130.1	1.0	1.0	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
GidB	PF02527.15	gi|429217508|ref|YP_007175498.1|	-	0.035	13.4	0.0	0.059	12.7	0.0	1.3	1	0	0	1	1	1	0	rRNA	small	subunit	methyltransferase	G
DUF4208	PF13907.6	gi|429217508|ref|YP_007175498.1|	-	0.059	13.8	0.1	0.16	12.5	0.1	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4208)
DUF655	PF04919.12	gi|429217509|ref|YP_007175499.1|	-	7.2e-60	202.0	0.3	9.6e-60	201.6	0.3	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF655)
HHH_6	PF14579.6	gi|429217509|ref|YP_007175499.1|	-	0.081	13.2	0.1	0.19	12.0	0.0	1.7	1	1	0	1	1	1	0	Helix-hairpin-helix	motif
PrmA	PF06325.13	gi|429217510|ref|YP_007175500.1|	-	1.3e-10	41.1	0.2	3.5e-10	39.8	0.0	1.7	2	0	0	2	2	2	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
MTS	PF05175.14	gi|429217510|ref|YP_007175500.1|	-	4.6e-08	32.8	0.0	7.2e-08	32.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
PCMT	PF01135.19	gi|429217510|ref|YP_007175500.1|	-	8e-06	25.8	0.0	1.1e-05	25.3	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_31	PF13847.6	gi|429217510|ref|YP_007175500.1|	-	0.00015	21.6	0.1	0.0005	19.9	0.0	1.9	2	1	1	3	3	3	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|429217510|ref|YP_007175500.1|	-	0.00021	21.9	0.0	0.00038	21.1	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.7	gi|429217510|ref|YP_007175500.1|	-	0.00048	20.1	0.1	0.0011	18.9	0.0	1.7	2	0	0	2	2	2	1	Methyltransferase	domain
Met_10	PF02475.16	gi|429217510|ref|YP_007175500.1|	-	0.0015	18.3	0.0	0.0018	18.1	0.0	1.3	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_23	PF13489.6	gi|429217510|ref|YP_007175500.1|	-	0.0063	16.4	0.0	0.0091	15.9	0.0	1.3	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_16	PF10294.9	gi|429217510|ref|YP_007175500.1|	-	0.037	13.8	0.0	0.065	13.0	0.0	1.4	1	0	0	1	1	1	0	Lysine	methyltransferase
Methyltransf_2	PF00891.18	gi|429217510|ref|YP_007175500.1|	-	0.043	13.1	0.1	0.14	11.4	0.0	1.7	2	0	0	2	2	2	0	O-methyltransferase	domain
Methyltransf_12	PF08242.12	gi|429217510|ref|YP_007175500.1|	-	0.056	14.2	0.0	0.12	13.1	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|429217510|ref|YP_007175500.1|	-	0.08	13.6	0.0	0.14	12.8	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
Cpn60_TCP1	PF00118.24	gi|429217511|ref|YP_007175501.1|	-	9.1e-181	601.8	13.3	1.2e-180	601.3	13.3	1.2	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
Fe-ADH_2	PF13685.6	gi|429217512|ref|YP_007175502.1|	-	3.4e-64	217.0	0.0	4.4e-64	216.6	0.0	1.1	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH	PF00465.19	gi|429217512|ref|YP_007175502.1|	-	1.2e-27	96.7	0.0	1.1e-25	90.2	0.0	2.0	1	1	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
DHQ_synthase	PF01761.20	gi|429217512|ref|YP_007175502.1|	-	1e-10	41.2	0.0	1.1e-06	28.1	0.0	3.0	2	1	0	2	2	2	2	3-dehydroquinate	synthase
IF2_N	PF04760.15	gi|429217512|ref|YP_007175502.1|	-	0.0054	16.5	0.1	1.3	8.8	0.1	2.6	2	0	0	2	2	2	2	Translation	initiation	factor	IF-2,	N-terminal	region
AIRC	PF00731.20	gi|429217512|ref|YP_007175502.1|	-	0.037	13.6	0.0	0.079	12.5	0.0	1.5	1	0	0	1	1	1	0	AIR	carboxylase
PASTA	PF03793.19	gi|429217512|ref|YP_007175502.1|	-	0.12	12.3	0.0	7.9	6.4	0.0	2.5	2	0	0	2	2	2	0	PASTA	domain
TatC	PF00902.18	gi|429217513|ref|YP_007175503.1|	-	5.5e-41	140.7	26.3	6.9e-41	140.3	26.3	1.1	1	0	0	1	1	1	1	Sec-independent	protein	translocase	protein	(TatC)
MttA_Hcf106	PF02416.16	gi|429217514|ref|YP_007175504.1|	-	3.2e-14	52.0	0.5	4e-14	51.7	0.5	1.1	1	0	0	1	1	1	1	mttA/Hcf106	family
DUF4330	PF14221.6	gi|429217514|ref|YP_007175504.1|	-	0.017	15.4	0.0	0.018	15.3	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4330)
Lip_A_acyltrans	PF03279.13	gi|429217514|ref|YP_007175504.1|	-	0.041	13.1	0.0	0.041	13.1	0.0	1.0	1	0	0	1	1	1	0	Bacterial	lipid	A	biosynthesis	acyltransferase
EMC3_TMCO1	PF01956.16	gi|429217514|ref|YP_007175504.1|	-	0.095	12.4	0.0	0.096	12.4	0.0	1.0	1	0	0	1	1	1	0	Integral	membrane	protein	EMC3/TMCO1-like
TPR_8	PF13181.6	gi|429217515|ref|YP_007175505.1|	-	8.1e-05	22.5	3.1	4	7.9	0.1	4.6	4	1	0	4	4	4	2	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|429217515|ref|YP_007175505.1|	-	0.00011	22.4	0.4	0.032	14.5	0.0	2.8	2	1	0	2	2	2	1	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|429217515|ref|YP_007175505.1|	-	0.00011	22.0	0.1	14	6.1	0.0	5.2	5	0	0	5	5	5	1	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|429217515|ref|YP_007175505.1|	-	0.0025	17.5	1.4	10	6.2	0.0	3.7	3	0	0	3	3	3	1	Tetratricopeptide	repeat
SRP_TPR_like	PF17004.5	gi|429217515|ref|YP_007175505.1|	-	0.0033	17.4	6.4	0.082	12.9	3.8	3.1	1	1	1	2	2	2	1	Putative	TPR-like	repeat
TPR_19	PF14559.6	gi|429217515|ref|YP_007175505.1|	-	0.004	17.6	1.7	0.32	11.5	0.0	3.8	3	1	1	4	4	4	1	Tetratricopeptide	repeat
Type_III_YscG	PF09477.10	gi|429217515|ref|YP_007175505.1|	-	0.0045	17.0	1.5	4.8	7.3	0.1	3.1	1	1	2	3	3	3	2	Bacterial	type	II	secretion	system	chaperone	protein	(type_III_yscG)
TPR_MalT	PF17874.1	gi|429217515|ref|YP_007175505.1|	-	0.0083	15.5	0.0	0.047	13.1	0.0	1.8	1	1	1	2	2	2	1	MalT-like	TPR	region
PPR	PF01535.20	gi|429217515|ref|YP_007175505.1|	-	0.047	13.9	5.2	0.18	12.1	0.0	4.0	5	0	0	5	5	5	0	PPR	repeat
PPR_2	PF13041.6	gi|429217515|ref|YP_007175505.1|	-	0.32	11.2	2.0	0.83	9.9	0.1	2.7	3	0	0	3	3	3	0	PPR	repeat	family
DUF2897	PF11446.8	gi|429217516|ref|YP_007175506.1|	-	2	8.3	6.4	0.64	9.9	0.3	3.2	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2897)
DUF2207	PF09972.9	gi|429217517|ref|YP_007175507.1|	-	0.13	11.0	0.2	0.15	10.8	0.2	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
Cytochrom_B_N_2	PF13631.6	gi|429217518|ref|YP_007175508.1|	-	7.3e-43	146.5	5.5	7.3e-43	146.5	5.5	3.5	4	1	0	4	4	4	2	Cytochrome	b(N-terminal)/b6/petB
Cytochrome_B	PF00033.19	gi|429217518|ref|YP_007175508.1|	-	2.7e-28	99.1	12.0	2.7e-28	99.1	12.0	2.6	3	0	0	3	3	3	1	Cytochrome	b/b6/petB
Cytochrom_B_C	PF00032.17	gi|429217518|ref|YP_007175508.1|	-	1.7e-08	34.7	5.2	1.7e-08	34.7	5.2	3.2	2	2	1	3	3	3	1	Cytochrome	b(C-terminal)/b6/petD
DUF4405	PF14358.6	gi|429217518|ref|YP_007175508.1|	-	0.0012	19.4	4.3	0.0012	19.4	4.3	4.4	5	1	0	5	5	5	1	Domain	of	unknown	function	(DUF4405)
DUF438	PF04282.13	gi|429217518|ref|YP_007175508.1|	-	0.14	12.1	0.0	0.26	11.3	0.0	1.3	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF438)
Rieske	PF00355.26	gi|429217519|ref|YP_007175509.1|	-	3.2e-10	39.8	0.1	5.7e-10	39.0	0.1	1.4	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
CytB6-F_Fe-S	PF08802.10	gi|429217519|ref|YP_007175509.1|	-	0.00026	21.0	0.0	0.00059	19.8	0.0	1.6	1	0	0	1	1	1	1	Cytochrome	B6-F	complex	Fe-S	subunit
TAT_signal	PF10518.9	gi|429217519|ref|YP_007175509.1|	-	0.0015	18.3	0.1	0.0026	17.5	0.1	1.5	1	0	0	1	1	1	1	TAT	(twin-arginine	translocation)	pathway	signal	sequence
EB_dh	PF09459.10	gi|429217520|ref|YP_007175510.1|	-	1.6e-25	90.6	0.8	2e-25	90.2	0.8	1.2	1	0	0	1	1	1	1	Ethylbenzene	dehydrogenase
DsbC_N	PF10411.9	gi|429217520|ref|YP_007175510.1|	-	0.048	13.1	0.0	0.13	11.8	0.0	1.7	1	0	0	1	1	1	0	Disulfide	bond	isomerase	protein	N-terminus
DUF3671	PF12420.8	gi|429217520|ref|YP_007175510.1|	-	4.8	7.3	8.3	3.1	7.9	0.8	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function
DUF2651	PF10852.8	gi|429217520|ref|YP_007175510.1|	-	9.5	6.9	9.5	0.22	12.2	0.4	2.6	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2651)
Proteasome	PF00227.26	gi|429217521|ref|YP_007175511.1|	-	1.4e-54	184.5	2.0	1.5e-54	184.4	2.0	1.0	1	0	0	1	1	1	1	Proteasome	subunit
Beta-Casp	PF10996.8	gi|429217522|ref|YP_007175512.1|	-	3.6e-25	88.4	0.0	8.3e-25	87.2	0.0	1.7	1	0	0	1	1	1	1	Beta-Casp	domain
KH_7	PF17214.3	gi|429217522|ref|YP_007175512.1|	-	3e-19	68.7	3.0	1.6e-18	66.4	0.8	3.2	3	0	0	3	3	3	1	KH	domain
RMMBL	PF07521.12	gi|429217522|ref|YP_007175512.1|	-	7e-14	51.5	0.0	2e-13	50.0	0.0	1.9	1	0	0	1	1	1	1	Zn-dependent	metallo-hydrolase	RNA	specificity	domain
Lactamase_B_6	PF16661.5	gi|429217522|ref|YP_007175512.1|	-	1.8e-11	43.9	0.0	4.9e-11	42.4	0.0	1.7	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|429217522|ref|YP_007175512.1|	-	7.3e-09	35.9	0.0	3e-07	30.7	0.0	2.3	2	0	0	2	2	2	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|429217522|ref|YP_007175512.1|	-	3.2e-07	30.1	0.1	6.3e-07	29.1	0.1	1.5	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.6	gi|429217522|ref|YP_007175512.1|	-	4.8e-05	23.3	0.0	0.00039	20.4	0.0	2.3	2	0	0	2	2	2	1	Beta-lactamase	superfamily	domain
Polbeta	PF18765.1	gi|429217523|ref|YP_007175513.1|	-	7.9e-06	25.9	0.1	2.1e-05	24.5	0.1	1.7	1	0	0	1	1	1	1	Polymerase	beta,	Nucleotidyltransferase
NTP_transf_2	PF01909.23	gi|429217523|ref|YP_007175513.1|	-	2.4e-05	24.5	0.2	5.4e-05	23.4	0.1	1.9	1	1	1	2	2	2	1	Nucleotidyltransferase	domain
DUF4269	PF14091.6	gi|429217523|ref|YP_007175513.1|	-	0.13	12.5	0.0	0.48	10.7	0.0	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4269)
NTP_transf_2	PF01909.23	gi|429217524|ref|YP_007175514.1|	-	2.6e-08	34.0	0.1	5.3e-08	33.0	0.1	1.5	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
Polbeta	PF18765.1	gi|429217524|ref|YP_007175514.1|	-	0.00023	21.2	0.3	0.00052	20.0	0.3	1.6	1	0	0	1	1	1	1	Polymerase	beta,	Nucleotidyltransferase
Baculo_19	PF04798.12	gi|429217524|ref|YP_007175514.1|	-	0.0012	18.6	0.4	0.002	17.9	0.4	1.4	1	0	0	1	1	1	1	Baculovirus	19	kDa	protein	conserved	region
DUF4269	PF14091.6	gi|429217524|ref|YP_007175514.1|	-	0.15	12.3	0.0	0.26	11.5	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4269)
SIS	PF01380.22	gi|429217525|ref|YP_007175515.1|	-	3.6e-14	52.7	0.8	6.6e-14	51.9	0.0	1.8	3	0	0	3	3	3	1	SIS	domain
SIS_2	PF13580.6	gi|429217525|ref|YP_007175515.1|	-	4.1e-11	43.0	1.1	1.4e-07	31.7	0.4	2.3	1	1	1	2	2	2	2	SIS	domain
PRMT5	PF05185.16	gi|429217525|ref|YP_007175515.1|	-	0.0056	16.5	0.7	1.1	9.1	0.1	2.2	1	1	1	2	2	2	2	PRMT5	arginine-N-methyltransferase
CCM2_C	PF16545.5	gi|429217525|ref|YP_007175515.1|	-	0.075	13.6	0.0	0.14	12.7	0.0	1.4	1	0	0	1	1	1	0	Cerebral	cavernous	malformation	protein,	harmonin-homology
MIS13	PF08202.11	gi|429217526|ref|YP_007175516.1|	-	0.0041	16.5	2.9	0.0043	16.4	2.9	1.0	1	0	0	1	1	1	1	Mis12-Mtw1	protein	family
FliS	PF02561.14	gi|429217526|ref|YP_007175516.1|	-	0.0067	16.7	1.7	0.02	15.2	1.7	1.7	1	1	0	1	1	1	1	Flagellar	protein	FliS
DUF16	PF01519.16	gi|429217526|ref|YP_007175516.1|	-	0.016	15.7	1.5	0.032	14.7	1.5	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	DUF16
Glyco_trans_2_3	PF13632.6	gi|429217527|ref|YP_007175517.1|	-	2e-13	50.7	0.1	3.3e-13	50.0	0.1	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_tranf_2_3	PF13641.6	gi|429217527|ref|YP_007175517.1|	-	9.8e-07	28.9	0.0	1.2e-06	28.6	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
DUF2099	PF09872.9	gi|429217527|ref|YP_007175517.1|	-	0.019	14.2	0.2	0.032	13.4	0.2	1.4	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2099)
Glyco_tranf_2_4	PF13704.6	gi|429217527|ref|YP_007175517.1|	-	0.03	14.8	0.0	0.058	13.9	0.0	1.5	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
ATP-synt_A	PF00119.20	gi|429217527|ref|YP_007175517.1|	-	0.37	10.7	7.3	4	7.3	0.6	2.2	2	0	0	2	2	2	0	ATP	synthase	A	chain
SpoU_methylase	PF00588.19	gi|429217528|ref|YP_007175518.1|	-	1.1e-26	93.7	0.0	1.7e-26	93.1	0.0	1.3	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
Methyltrn_RNA_4	PF09936.9	gi|429217528|ref|YP_007175518.1|	-	0.00039	20.3	0.0	0.014	15.3	0.0	2.2	1	1	0	1	1	1	1	SAM-dependent	RNA	methyltransferase
TA_inhibitor	PF17574.2	gi|429217528|ref|YP_007175518.1|	-	0.049	13.7	0.0	0.14	12.2	0.0	1.8	1	0	0	1	1	1	0	Inhibitor	of	toxin/antitoxin	system	(Gp4.5)
Semialdhyde_dh	PF01118.24	gi|429217528|ref|YP_007175518.1|	-	0.13	12.7	0.0	0.41	11.1	0.0	1.8	2	0	0	2	2	2	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
ABC_tran	PF00005.27	gi|429217529|ref|YP_007175519.1|	-	1.4e-42	145.4	0.1	3.1e-20	73.1	0.1	2.4	2	0	0	2	2	2	2	ABC	transporter
AAA_21	PF13304.6	gi|429217529|ref|YP_007175519.1|	-	3.6e-16	59.9	8.3	0.0015	18.4	0.2	4.3	2	2	1	4	4	4	4	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|429217529|ref|YP_007175519.1|	-	5.9e-12	45.5	8.2	1.5e-06	27.8	1.5	3.6	2	2	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
RLI	PF04068.15	gi|429217529|ref|YP_007175519.1|	-	1.7e-11	43.7	3.2	1.7e-11	43.7	3.2	2.0	2	0	0	2	2	1	1	Possible	Fer4-like	domain	in	RNase	L	inhibitor,	RLI
Fer4_6	PF12837.7	gi|429217529|ref|YP_007175519.1|	-	1.4e-08	34.4	14.2	7.2e-05	22.7	3.6	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4	PF00037.27	gi|429217529|ref|YP_007175519.1|	-	1.5e-08	34.1	4.6	1.5e-08	34.1	4.6	3.1	3	0	0	3	3	3	1	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|429217529|ref|YP_007175519.1|	-	1.1e-07	31.8	9.7	2.9e-05	24.1	0.4	2.3	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
AAA	PF00004.29	gi|429217529|ref|YP_007175519.1|	-	2.9e-06	27.7	0.1	0.014	15.8	0.0	2.9	3	0	0	3	3	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
Fer4_21	PF14697.6	gi|429217529|ref|YP_007175519.1|	-	5.3e-06	26.5	10.0	9.6e-06	25.6	10.0	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|429217529|ref|YP_007175519.1|	-	7.8e-06	26.4	17.9	0.00037	21.0	0.5	2.3	1	1	2	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|429217529|ref|YP_007175519.1|	-	5.4e-05	23.0	11.9	0.00011	22.0	1.7	2.4	2	0	0	2	2	2	1	4Fe-4S	binding	domain
AAA_18	PF13238.6	gi|429217529|ref|YP_007175519.1|	-	5.5e-05	23.7	0.7	0.091	13.3	0.0	3.3	2	1	0	2	2	2	1	AAA	domain
Fer4_16	PF13484.6	gi|429217529|ref|YP_007175519.1|	-	7.9e-05	23.5	5.9	0.0028	18.6	0.1	2.6	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
AAA_24	PF13479.6	gi|429217529|ref|YP_007175519.1|	-	8.2e-05	22.4	0.4	0.24	11.1	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
Rad17	PF03215.15	gi|429217529|ref|YP_007175519.1|	-	0.00015	21.8	0.1	0.057	13.3	0.0	2.9	2	1	1	3	3	3	1	Rad17	P-loop	domain
AAA_33	PF13671.6	gi|429217529|ref|YP_007175519.1|	-	0.00015	22.0	0.0	0.25	11.5	0.0	2.8	2	1	0	2	2	2	2	AAA	domain
AAA_15	PF13175.6	gi|429217529|ref|YP_007175519.1|	-	0.00019	21.2	6.7	0.08	12.6	1.2	2.8	3	0	0	3	3	3	2	AAA	ATPase	domain
Fer4_9	PF13187.6	gi|429217529|ref|YP_007175519.1|	-	0.0004	20.5	6.3	0.00097	19.3	6.4	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
SbcCD_C	PF13558.6	gi|429217529|ref|YP_007175519.1|	-	0.00089	19.4	0.0	0.67	10.2	0.0	2.6	2	0	0	2	2	2	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_14	PF13173.6	gi|429217529|ref|YP_007175519.1|	-	0.0015	18.6	6.0	1	9.4	0.2	3.7	2	2	2	4	4	4	2	AAA	domain
Fer4_3	PF12798.7	gi|429217529|ref|YP_007175519.1|	-	0.004	18.0	3.2	0.004	18.0	3.2	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
RNA_helicase	PF00910.22	gi|429217529|ref|YP_007175519.1|	-	0.0042	17.4	0.0	5	7.6	0.0	2.6	2	0	0	2	2	2	0	RNA	helicase
RecA	PF00154.21	gi|429217529|ref|YP_007175519.1|	-	0.0048	16.4	0.1	0.16	11.4	0.0	2.6	3	0	0	3	3	3	1	recA	bacterial	DNA	recombination	protein
DUF87	PF01935.17	gi|429217529|ref|YP_007175519.1|	-	0.0057	16.8	0.3	0.025	14.7	0.0	2.1	2	0	0	2	2	2	1	Helicase	HerA,	central	domain
MobB	PF03205.14	gi|429217529|ref|YP_007175519.1|	-	0.0099	15.8	1.0	4.9	7.1	0.0	2.5	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_16	PF13191.6	gi|429217529|ref|YP_007175519.1|	-	0.011	16.2	0.0	6.2	7.2	0.0	2.4	2	0	0	2	2	2	0	AAA	ATPase	domain
RsgA_GTPase	PF03193.16	gi|429217529|ref|YP_007175519.1|	-	0.011	15.6	0.0	6.9	6.5	0.0	2.6	2	0	0	2	2	2	0	RsgA	GTPase
Fer4_4	PF12800.7	gi|429217529|ref|YP_007175519.1|	-	0.012	16.0	2.5	0.012	16.0	2.5	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
AAA_29	PF13555.6	gi|429217529|ref|YP_007175519.1|	-	0.016	14.9	1.1	1.8	8.4	0.1	2.5	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
MMR_HSR1	PF01926.23	gi|429217529|ref|YP_007175519.1|	-	0.018	15.1	0.2	8.8	6.5	0.0	2.9	3	0	0	3	3	2	0	50S	ribosome-binding	GTPase
AAA_28	PF13521.6	gi|429217529|ref|YP_007175519.1|	-	0.024	14.9	0.1	6.2	7.0	0.0	2.5	2	0	0	2	2	2	0	AAA	domain
AAA_23	PF13476.6	gi|429217529|ref|YP_007175519.1|	-	0.027	15.0	10.0	0.79	10.2	0.3	2.7	2	1	0	2	2	2	0	AAA	domain
Fer4_8	PF13183.6	gi|429217529|ref|YP_007175519.1|	-	0.068	13.6	4.2	0.082	13.4	0.2	2.2	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
NTPase_1	PF03266.15	gi|429217529|ref|YP_007175519.1|	-	0.069	13.1	2.1	9.3	6.1	0.1	2.9	2	0	0	2	2	2	0	NTPase
Thymidylate_kin	PF02223.17	gi|429217529|ref|YP_007175519.1|	-	0.079	12.6	0.3	5.3	6.7	0.1	3.2	3	0	0	3	3	3	0	Thymidylate	kinase
AAA_22	PF13401.6	gi|429217529|ref|YP_007175519.1|	-	0.12	12.7	1.4	9.5	6.5	0.3	2.7	2	2	0	2	2	2	0	AAA	domain
TsaE	PF02367.17	gi|429217529|ref|YP_007175519.1|	-	0.12	12.4	0.2	28	4.7	0.0	2.6	2	0	0	2	2	2	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
SRP54	PF00448.22	gi|429217529|ref|YP_007175519.1|	-	0.12	12.0	2.4	4.6	6.8	0.9	2.4	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
T2SSE	PF00437.20	gi|429217529|ref|YP_007175519.1|	-	0.16	11.0	0.1	2.8	6.9	0.0	2.5	3	0	0	3	3	3	0	Type	II/IV	secretion	system	protein
AAA_30	PF13604.6	gi|429217529|ref|YP_007175519.1|	-	0.16	11.6	0.3	1.1	9.0	0.1	2.3	2	0	0	2	2	2	0	AAA	domain
Fer4_17	PF13534.6	gi|429217529|ref|YP_007175519.1|	-	0.22	12.1	6.6	0.19	12.3	0.8	2.3	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
NACHT	PF05729.12	gi|429217529|ref|YP_007175519.1|	-	0.23	11.4	1.3	7.3	6.5	0.5	2.4	2	0	0	2	2	2	0	NACHT	domain
Lactamase_B_3	PF13483.6	gi|429217530|ref|YP_007175520.1|	-	8.7e-28	97.3	0.3	1.4e-27	96.6	0.3	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.7	gi|429217530|ref|YP_007175520.1|	-	4.3e-21	75.3	0.1	5.4e-21	75.0	0.1	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|429217530|ref|YP_007175520.1|	-	4.2e-13	49.8	0.6	1.1e-12	48.4	0.6	1.6	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_6	PF16661.5	gi|429217530|ref|YP_007175520.1|	-	0.12	11.8	0.0	0.19	11.1	0.0	1.3	1	0	0	1	1	1	0	Metallo-beta-lactamase	superfamily	domain
Peptidase_M24	PF00557.24	gi|429217531|ref|YP_007175521.1|	-	6.4e-34	117.5	0.0	7.5e-34	117.3	0.0	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
DUF4318	PF14201.6	gi|429217531|ref|YP_007175521.1|	-	0.066	13.7	0.1	5.5	7.5	0.0	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4318)
DUF1512	PF07431.12	gi|429217532|ref|YP_007175522.1|	-	5.7e-144	479.5	4.3	6.5e-144	479.3	4.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1512)
Vfa1	PF08432.10	gi|429217534|ref|YP_007175524.1|	-	0.64	10.3	4.1	0.86	9.9	4.1	1.3	1	1	0	1	1	1	0	AAA-ATPase	Vps4-associated	protein	1
zf-C4_ClpX	PF06689.13	gi|429217534|ref|YP_007175524.1|	-	0.67	9.9	6.7	1.2	9.0	6.7	1.5	1	1	0	1	1	1	0	ClpX	C4-type	zinc	finger
TFIIS_C	PF01096.18	gi|429217535|ref|YP_007175525.1|	-	1.1e-20	73.2	10.4	1.5e-19	69.6	1.8	3.1	3	0	0	3	3	3	1	Transcription	factor	S-II	(TFIIS)
TF_Zn_Ribbon	PF08271.12	gi|429217535|ref|YP_007175525.1|	-	8.6e-10	38.0	2.7	0.0017	17.8	0.1	3.4	3	0	0	3	3	3	2	TFIIB	zinc-binding
RNA_POL_M_15KD	PF02150.16	gi|429217535|ref|YP_007175525.1|	-	2.3e-08	33.8	11.6	1.1e-07	31.6	0.9	3.1	2	1	0	2	2	2	1	RNA	polymerases	M/15	Kd	subunit
Zn_Tnp_IS1595	PF12760.7	gi|429217535|ref|YP_007175525.1|	-	9.3e-08	31.9	10.0	0.00011	22.2	0.6	3.1	2	1	1	3	3	3	1	Transposase	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.11	gi|429217535|ref|YP_007175525.1|	-	1.2e-07	31.6	2.8	0.0014	18.5	0.0	2.7	1	1	1	2	2	2	2	Putative	transposase	DNA-binding	domain
DZR	PF12773.7	gi|429217535|ref|YP_007175525.1|	-	1.4e-07	31.4	4.3	0.00065	19.7	0.3	2.6	2	1	0	2	2	2	2	Double	zinc	ribbon
zinc_ribbon_2	PF13240.6	gi|429217535|ref|YP_007175525.1|	-	1.6e-07	30.8	11.1	0.21	11.4	0.0	4.2	4	0	0	4	4	4	3	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|429217535|ref|YP_007175525.1|	-	7.6e-07	28.3	10.8	0.079	12.4	0.0	4.3	4	0	0	4	4	4	3	zinc-ribbon	domain
zinc_ribbon_4	PF13717.6	gi|429217535|ref|YP_007175525.1|	-	7.4e-06	25.8	10.4	0.71	9.8	0.3	4.3	4	0	0	4	4	4	2	zinc-ribbon	domain
Zn-ribbon_8	PF09723.10	gi|429217535|ref|YP_007175525.1|	-	3.3e-05	23.9	7.4	5.9	7.1	0.0	4.3	4	0	0	4	4	4	0	Zinc	ribbon	domain
zf-NADH-PPase	PF09297.11	gi|429217535|ref|YP_007175525.1|	-	0.00016	21.3	11.0	0.0092	15.6	2.8	4.0	3	1	1	4	4	4	1	NADH	pyrophosphatase	zinc	ribbon	domain
zf-ISL3	PF14690.6	gi|429217535|ref|YP_007175525.1|	-	0.0005	20.7	8.9	3.7	8.3	0.1	4.1	4	0	0	4	4	4	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
HypA	PF01155.19	gi|429217535|ref|YP_007175525.1|	-	0.0005	20.1	3.7	0.22	11.5	1.8	2.8	1	1	1	2	2	2	2	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
A2L_zn_ribbon	PF08792.10	gi|429217535|ref|YP_007175525.1|	-	0.00054	19.6	9.0	0.36	10.6	0.1	4.0	4	0	0	4	4	4	2	A2L	zinc	ribbon	domain
DUF2387	PF09526.10	gi|429217535|ref|YP_007175525.1|	-	0.00057	20.0	5.9	0.12	12.6	0.3	2.6	2	1	0	2	2	2	2	Probable	metal-binding	protein	(DUF2387)
CpXC	PF14353.6	gi|429217535|ref|YP_007175525.1|	-	0.0011	19.0	10.2	0.075	13.1	0.1	3.9	1	1	3	4	4	4	1	CpXC	protein
zf-TFIIB	PF13453.6	gi|429217535|ref|YP_007175525.1|	-	0.0014	18.0	8.8	0.086	12.2	0.8	2.7	2	1	0	2	2	2	2	Transcription	factor	zinc-finger
Elf1	PF05129.13	gi|429217535|ref|YP_007175525.1|	-	0.0015	18.6	1.0	1.7	8.7	0.0	2.4	2	0	0	2	2	2	2	Transcription	elongation	factor	Elf1	like
IBR	PF01485.21	gi|429217535|ref|YP_007175525.1|	-	0.0018	18.5	7.8	0.011	15.9	0.5	3.0	1	1	1	2	2	2	1	IBR	domain,	a	half	RING-finger	domain
PhnA_Zn_Ribbon	PF08274.12	gi|429217535|ref|YP_007175525.1|	-	0.0019	18.1	6.4	2.5	8.1	0.1	3.8	3	1	0	3	3	3	0	PhnA	Zinc-Ribbon
Nudix_N_2	PF14803.6	gi|429217535|ref|YP_007175525.1|	-	0.0021	17.9	12.1	0.041	13.8	2.3	3.4	2	2	0	2	2	2	1	Nudix	N-terminal
Lar_restr_allev	PF14354.6	gi|429217535|ref|YP_007175525.1|	-	0.0022	18.3	7.9	0.15	12.4	0.3	2.8	2	1	0	2	2	2	1	Restriction	alleviation	protein	Lar
Zn_ribbon_recom	PF13408.6	gi|429217535|ref|YP_007175525.1|	-	0.0025	18.3	12.4	0.019	15.4	2.1	2.8	2	2	0	2	2	2	1	Recombinase	zinc	beta	ribbon	domain
zinc_ribbon_15	PF17032.5	gi|429217535|ref|YP_007175525.1|	-	0.0039	17.9	6.9	1.4	9.7	3.2	3.2	2	1	0	2	2	2	1	zinc-ribbon	family
Terminase_GpA	PF05876.12	gi|429217535|ref|YP_007175525.1|	-	0.0052	15.4	3.9	0.036	12.6	0.4	2.6	2	1	1	3	3	3	1	Phage	terminase	large	subunit	(GpA)
Mu-like_Com	PF10122.9	gi|429217535|ref|YP_007175525.1|	-	0.013	14.9	9.1	0.79	9.2	0.0	3.7	3	1	1	4	4	4	0	Mu-like	prophage	protein	Com
Zn_ribbon_SprT	PF17283.2	gi|429217535|ref|YP_007175525.1|	-	0.013	15.3	9.6	3.5	7.6	0.4	4.1	4	0	0	4	4	4	0	SprT-like	zinc	ribbon	domain
TerY_C	PF15616.6	gi|429217535|ref|YP_007175525.1|	-	0.02	15.0	2.1	2.4	8.3	0.3	2.4	2	1	0	2	2	2	0	TerY-C	metal	binding	domain
DUF35_N	PF12172.8	gi|429217535|ref|YP_007175525.1|	-	0.023	14.6	10.8	9.9	6.1	0.2	4.2	4	0	0	4	4	4	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf_UBZ	PF18439.1	gi|429217535|ref|YP_007175525.1|	-	0.028	14.0	9.5	6.8	6.4	0.1	4.2	4	0	0	4	4	4	0	Ubiquitin-Binding	Zinc	Finger
YhfH	PF14149.6	gi|429217535|ref|YP_007175525.1|	-	0.028	14.4	5.9	29	4.8	0.1	4.2	4	0	0	4	4	4	0	YhfH-like	protein
DNA_RNApol_7kD	PF03604.13	gi|429217535|ref|YP_007175525.1|	-	0.028	14.1	12.0	3.7	7.3	0.5	4.3	4	0	0	4	4	4	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
UPF0547	PF10571.9	gi|429217535|ref|YP_007175525.1|	-	0.035	14.2	15.6	6.1	7.0	0.3	4.2	4	0	0	4	4	4	0	Uncharacterised	protein	family	UPF0547
zf-IS66	PF13005.7	gi|429217535|ref|YP_007175525.1|	-	0.056	13.9	10.6	4	7.9	0.3	4.2	4	0	0	4	4	4	0	zinc-finger	binding	domain	of	transposase	IS66
NOB1_Zn_bind	PF08772.11	gi|429217535|ref|YP_007175525.1|	-	0.064	13.4	13.2	3.3	7.9	0.7	3.9	2	2	1	3	3	3	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
YacG	PF03884.14	gi|429217535|ref|YP_007175525.1|	-	0.085	12.6	4.0	10	5.9	0.1	3.4	3	0	0	3	3	3	0	DNA	gyrase	inhibitor	YacG
zf_C2H2_10	PF18414.1	gi|429217535|ref|YP_007175525.1|	-	0.087	12.4	13.5	1	9.0	0.5	4.2	4	0	0	4	4	4	0	C2H2	type	zinc-finger
zf-Di19	PF05605.12	gi|429217535|ref|YP_007175525.1|	-	0.1	12.9	1.6	3.6	7.9	0.0	3.0	2	1	1	3	3	3	0	Drought	induced	19	protein	(Di19),	zinc-binding
zf-RING_7	PF02591.15	gi|429217535|ref|YP_007175525.1|	-	0.11	12.8	5.0	9.2	6.6	0.0	3.8	4	0	0	4	4	4	0	C4-type	zinc	ribbon	domain
DpnI	PF06044.12	gi|429217535|ref|YP_007175525.1|	-	0.11	12.2	3.4	2.2	7.9	0.0	2.5	1	1	1	2	2	2	0	Dam-replacing	family
zinc_ribbon_10	PF10058.9	gi|429217535|ref|YP_007175525.1|	-	0.12	12.2	6.7	14	5.5	0.1	3.9	4	0	0	4	4	4	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
zinc_ribbon_13	PF09855.9	gi|429217535|ref|YP_007175525.1|	-	0.14	12.4	10.7	10	6.4	0.1	4.0	4	0	0	4	4	4	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
Baculo_LEF5_C	PF11792.8	gi|429217535|ref|YP_007175525.1|	-	0.14	11.8	0.0	0.14	11.8	0.0	3.3	4	0	0	4	4	3	0	Baculoviridae	late	expression	factor	5	C-terminal	domain
Cys_rich_KTR	PF14205.6	gi|429217535|ref|YP_007175525.1|	-	0.16	11.8	11.4	3.6	7.5	0.1	3.5	3	1	0	3	3	3	0	Cysteine-rich	KTR
RNHCP	PF12647.7	gi|429217535|ref|YP_007175525.1|	-	0.18	11.8	6.1	0.75	9.8	1.8	2.7	1	1	1	2	2	2	0	RNHCP	domain
TackOD1	PF18551.1	gi|429217535|ref|YP_007175525.1|	-	0.2	11.3	4.0	1.3	8.6	0.2	2.6	2	1	0	2	2	2	0	Thaumarchaeal	output	domain	1
DUF1390	PF07150.11	gi|429217535|ref|YP_007175525.1|	-	0.22	11.2	2.4	1.1	9.0	0.1	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1390)
HscB_4_cys	PF18256.1	gi|429217535|ref|YP_007175525.1|	-	0.29	11.0	7.4	2	8.3	0.0	3.9	4	0	0	4	4	4	0	Co-chaperone	HscB	tetracysteine	metal	binding	motif
eIF-5_eIF-2B	PF01873.17	gi|429217535|ref|YP_007175525.1|	-	0.31	10.9	3.7	8.1	6.4	0.2	2.5	2	1	0	2	2	2	0	Domain	found	in	IF2B/IF5
zf-H2C2_2	PF13465.6	gi|429217535|ref|YP_007175525.1|	-	0.31	11.5	16.6	0.4	11.2	0.6	4.2	4	1	0	4	4	4	0	Zinc-finger	double	domain
DUF3797	PF12677.7	gi|429217535|ref|YP_007175525.1|	-	0.32	10.9	17.5	2	8.4	3.8	3.8	2	2	1	3	3	3	0	Domain	of	unknown	function	(DUF3797)
zf-CCHC_5	PF14787.6	gi|429217535|ref|YP_007175525.1|	-	0.36	10.6	11.0	6.3	6.6	0.3	4.2	4	0	0	4	4	4	0	GAG-polyprotein	viral	zinc-finger
zinc_ribbon_5	PF13719.6	gi|429217535|ref|YP_007175525.1|	-	0.38	10.5	10.1	32	4.4	0.3	4.2	4	0	0	4	4	4	0	zinc-ribbon	domain
DUF4379	PF14311.6	gi|429217535|ref|YP_007175525.1|	-	0.39	11.1	6.3	8.6	6.8	0.5	3.9	4	0	0	4	4	4	0	Probable	Zinc-ribbon	domain
Trm112p	PF03966.16	gi|429217535|ref|YP_007175525.1|	-	0.4	11.3	3.1	18	6.0	3.8	2.8	1	1	1	2	2	2	0	Trm112p-like	protein
zf-C4_Topoisom	PF01396.19	gi|429217535|ref|YP_007175525.1|	-	0.44	10.4	14.6	11	5.9	0.0	3.7	3	1	0	3	3	3	0	Topoisomerase	DNA	binding	C4	zinc	finger
Zn_Tnp_IS1	PF03811.13	gi|429217535|ref|YP_007175525.1|	-	0.48	10.2	9.1	1.5	8.6	0.0	3.8	4	0	0	4	4	4	0	InsA	N-terminal	domain
DUF3268	PF11672.8	gi|429217535|ref|YP_007175525.1|	-	0.49	10.7	5.0	12	6.2	0.2	2.9	2	1	0	2	2	2	0	zinc-finger-containing	domain
Ribosomal_L32p	PF01783.23	gi|429217535|ref|YP_007175525.1|	-	0.53	10.6	8.5	1.4	9.2	2.3	3.7	3	1	0	3	3	3	0	Ribosomal	L32p	protein	family
zinc-ribbons_6	PF07191.12	gi|429217535|ref|YP_007175525.1|	-	0.67	10.0	8.2	2.3	8.2	1.1	3.3	1	1	1	2	2	2	0	zinc-ribbons
C1_1	PF00130.22	gi|429217535|ref|YP_007175525.1|	-	0.69	9.9	7.3	0.43	10.5	0.4	2.6	2	1	0	2	2	2	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
FYDLN_acid	PF09538.10	gi|429217535|ref|YP_007175525.1|	-	0.79	10.4	6.7	3.3	8.4	0.2	3.3	2	2	2	4	4	3	0	Protein	of	unknown	function	(FYDLN_acid)
zf-Mss51	PF13824.6	gi|429217535|ref|YP_007175525.1|	-	1.2	9.3	13.4	5.2	7.2	2.9	3.7	1	1	2	3	3	3	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
FdhE	PF04216.12	gi|429217535|ref|YP_007175525.1|	-	1.3	8.9	7.6	0.39	10.6	0.4	2.2	2	1	0	2	2	2	0	Protein	involved	in	formate	dehydrogenase	formation
zf-C2H2_3	PF13878.6	gi|429217535|ref|YP_007175525.1|	-	1.8	8.4	8.2	73	3.3	0.1	4.0	4	0	0	4	4	4	0	zinc-finger	of	acetyl-transferase	ESCO
zinc_ribbon_9	PF14369.6	gi|429217535|ref|YP_007175525.1|	-	2.1	8.7	8.0	25	5.2	0.2	3.6	4	0	0	4	4	3	0	zinc-ribbon
Rubredoxin_2	PF18073.1	gi|429217535|ref|YP_007175525.1|	-	2.1	8.1	18.8	1.5	8.6	1.5	4.2	4	0	0	4	4	4	0	Rubredoxin	metal	binding	domain
zf-ZPR1	PF03367.13	gi|429217535|ref|YP_007175525.1|	-	2.5	7.9	6.8	4.8	7.0	0.1	2.9	1	1	0	2	2	2	0	ZPR1	zinc-finger	domain
Nop10p	PF04135.12	gi|429217535|ref|YP_007175525.1|	-	2.6	8.2	5.8	26	4.9	0.0	3.7	3	1	0	3	3	3	0	Nucleolar	RNA-binding	protein,	Nop10p	family
zf-HIT	PF04438.16	gi|429217535|ref|YP_007175525.1|	-	2.7	7.9	15.8	9.3	6.2	0.1	4.1	4	0	0	4	4	4	0	HIT	zinc	finger
DUF1178	PF06676.11	gi|429217535|ref|YP_007175525.1|	-	3.3	8.1	5.2	24	5.3	0.1	2.8	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF1178)
zf-ACC	PF17848.1	gi|429217535|ref|YP_007175525.1|	-	3.4	7.8	18.7	18	5.5	0.3	4.4	4	1	0	4	4	3	0	Acetyl-coA	carboxylase	zinc	finger	domain
ADK_lid	PF05191.14	gi|429217535|ref|YP_007175525.1|	-	3.6	7.7	9.6	30	4.7	0.2	4.0	4	0	0	4	4	4	0	Adenylate	kinase,	active	site	lid
zf-tcix	PF14952.6	gi|429217535|ref|YP_007175525.1|	-	4.5	7.0	15.6	21	4.8	0.3	4.1	4	0	0	4	4	4	0	Putative	treble-clef,	zinc-finger,	Zn-binding
DNA_ligase_ZBD	PF03119.16	gi|429217535|ref|YP_007175525.1|	-	5	7.2	14.5	9.2	6.4	0.2	3.9	4	0	0	4	4	3	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
C1_2	PF03107.16	gi|429217535|ref|YP_007175525.1|	-	5.6	7.4	8.3	35	4.8	3.2	2.9	2	1	0	2	2	2	0	C1	domain
RecR	PF02132.15	gi|429217535|ref|YP_007175525.1|	-	5.9	6.6	9.5	36	4.0	0.0	4.1	5	0	0	5	5	4	0	RecR	protein
Ogr_Delta	PF04606.12	gi|429217535|ref|YP_007175525.1|	-	6.4	6.9	14.3	27	4.8	0.5	4.1	3	1	0	3	3	3	0	Ogr/Delta-like	zinc	finger
zf-FPG_IleRS	PF06827.14	gi|429217535|ref|YP_007175525.1|	-	7.5	6.5	12.7	4	7.4	0.6	3.5	4	0	0	4	4	3	0	Zinc	finger	found	in	FPG	and	IleRS
DUF1936	PF09151.10	gi|429217535|ref|YP_007175525.1|	-	9.8	6.2	17.0	11	6.1	0.5	4.2	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF1936)
DUF2318	PF10080.9	gi|429217535|ref|YP_007175525.1|	-	9.8	6.4	7.6	3.9	7.7	0.5	3.1	2	2	1	4	4	3	0	Predicted	membrane	protein	(DUF2318)
tRNA-synt_1g	PF09334.11	gi|429217536|ref|YP_007175526.1|	-	1.5e-150	501.3	0.1	1.9e-150	501.0	0.1	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(M)
Anticodon_1	PF08264.13	gi|429217536|ref|YP_007175526.1|	-	5.6e-11	42.6	0.2	1.1e-10	41.7	0.2	1.4	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1e	PF01406.19	gi|429217536|ref|YP_007175526.1|	-	7.5e-08	32.1	0.2	0.00029	20.3	0.0	3.5	5	0	0	5	5	5	2	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1	PF00133.22	gi|429217536|ref|YP_007175526.1|	-	2.3e-07	29.5	0.4	0.00014	20.2	0.0	3.2	2	2	1	3	3	3	2	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1f	PF01921.18	gi|429217536|ref|YP_007175526.1|	-	0.0072	15.3	0.0	0.41	9.5	0.0	2.4	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(K)
TerY_C	PF15616.6	gi|429217536|ref|YP_007175526.1|	-	0.079	13.1	0.7	0.15	12.1	0.7	1.4	1	0	0	1	1	1	0	TerY-C	metal	binding	domain
DZR	PF12773.7	gi|429217536|ref|YP_007175526.1|	-	0.23	11.5	4.4	0.43	10.7	4.4	1.4	1	0	0	1	1	1	0	Double	zinc	ribbon
HTH_Tnp_IS630	PF01710.16	gi|429217536|ref|YP_007175526.1|	-	0.23	11.5	1.4	3	7.9	0.0	3.2	3	1	0	3	3	3	0	Transposase
zf-C2HC5	PF06221.13	gi|429217536|ref|YP_007175526.1|	-	0.62	10.1	2.5	2.1	8.4	0.4	2.2	1	1	1	2	2	2	0	Putative	zinc	finger	motif,	C2HC5-type
Stap_Strp_tox_C	PF02876.17	gi|429217536|ref|YP_007175526.1|	-	0.85	10.0	9.8	1.3	9.4	1.2	2.7	3	0	0	3	3	2	0	Staphylococcal/Streptococcal	toxin,	beta-grasp	domain
zinc_ribbon_2	PF13240.6	gi|429217536|ref|YP_007175526.1|	-	1.9	8.3	4.7	3.8	7.4	0.2	2.8	2	1	0	2	2	2	0	zinc-ribbon	domain
ACT	PF01842.25	gi|429217538|ref|YP_007175528.1|	-	2.3e-07	30.5	0.0	4.8e-07	29.4	0.0	1.5	1	0	0	1	1	1	1	ACT	domain
MazE_antitoxin	PF04014.18	gi|429217538|ref|YP_007175528.1|	-	4.4e-07	29.7	0.1	8e-07	28.8	0.1	1.5	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE,	bacterial	antitoxin
MraZ	PF02381.18	gi|429217538|ref|YP_007175528.1|	-	0.00018	21.4	0.0	0.00033	20.6	0.0	1.4	1	0	0	1	1	1	1	MraZ	protein,	putative	antitoxin-like
ACT_4	PF13291.6	gi|429217538|ref|YP_007175528.1|	-	0.011	16.3	0.6	0.023	15.3	0.6	1.5	1	1	0	1	1	1	0	ACT	domain
Ribosomal_S19	PF00203.21	gi|429217539|ref|YP_007175529.1|	-	1.4e-29	101.8	0.3	1.9e-29	101.4	0.3	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S19
Ribosomal_L22	PF00237.19	gi|429217540|ref|YP_007175530.1|	-	3.4e-27	94.7	0.1	4e-27	94.4	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L22p/L17e
Ribosomal_S3_C	PF00189.20	gi|429217541|ref|YP_007175531.1|	-	1.1e-23	83.5	3.4	5.1e-22	78.2	2.1	2.5	2	0	0	2	2	2	1	Ribosomal	protein	S3,	C-terminal	domain
KH_2	PF07650.17	gi|429217541|ref|YP_007175531.1|	-	6.1e-12	45.2	0.0	6.1e-12	45.2	0.0	2.6	2	1	0	2	2	2	1	KH	domain
KH_1	PF00013.29	gi|429217541|ref|YP_007175531.1|	-	0.068	13.0	4.6	0.072	12.9	0.2	3.1	3	0	0	3	3	3	0	KH	domain
KH_4	PF13083.6	gi|429217541|ref|YP_007175531.1|	-	0.11	12.4	0.1	0.11	12.4	0.1	3.1	3	0	0	3	3	3	0	KH	domain
YcbB	PF08664.10	gi|429217541|ref|YP_007175531.1|	-	0.16	12.0	2.8	0.34	11.0	2.8	1.6	1	0	0	1	1	1	0	YcbB	domain
YtxH	PF12732.7	gi|429217541|ref|YP_007175531.1|	-	0.22	12.1	3.9	0.75	10.4	0.4	2.4	1	1	1	2	2	2	0	YtxH-like	protein
Exog_C	PF18026.1	gi|429217541|ref|YP_007175531.1|	-	0.34	11.0	2.6	0.7	10.0	1.3	2.2	3	0	0	3	3	3	0	Endo/exonuclease	(EXOG)	C-terminal	domain
Ribosomal_L29	PF00831.23	gi|429217542|ref|YP_007175532.1|	-	1.5e-16	60.1	5.4	1.7e-16	59.9	5.4	1.1	1	0	0	1	1	1	1	Ribosomal	L29	protein
TubC_N	PF18563.1	gi|429217542|ref|YP_007175532.1|	-	0.023	14.7	0.1	0.044	13.8	0.1	1.4	1	0	0	1	1	1	0	TubC	N-terminal	docking	domain
UPF0086	PF01868.16	gi|429217543|ref|YP_007175533.1|	-	8e-20	70.6	0.1	9e-20	70.4	0.1	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	UPF0086
YcxB	PF14317.6	gi|429217543|ref|YP_007175533.1|	-	0.031	14.0	0.1	0.052	13.3	0.1	1.4	1	0	0	1	1	1	0	YcxB-like	protein
Ribosomal_S17	PF00366.20	gi|429217544|ref|YP_007175534.1|	-	9.9e-19	67.2	0.7	1.3e-18	66.9	0.7	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S17
Ribosomal_L14	PF00238.19	gi|429217545|ref|YP_007175535.1|	-	7.6e-33	113.2	0.3	9.5e-33	112.9	0.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L14p/L23e
Ribosomal_L26	PF16906.5	gi|429217546|ref|YP_007175536.1|	-	2.1e-28	98.6	1.7	3.2e-28	98.0	1.7	1.3	1	0	0	1	1	1	1	Ribosomal	proteins	L26	eukaryotic,	L24P	archaeal
KOW	PF00467.29	gi|429217546|ref|YP_007175536.1|	-	4.2e-09	36.0	6.1	9.4e-09	34.9	6.1	1.6	1	0	0	1	1	1	1	KOW	motif
hSH3	PF14603.6	gi|429217546|ref|YP_007175536.1|	-	0.014	15.9	3.1	0.1	13.0	0.2	2.1	1	1	1	2	2	2	0	Helically-extended	SH3	domain
Ribosomal_S4e	PF00900.20	gi|429217547|ref|YP_007175537.1|	-	4e-22	77.9	0.2	4e-22	77.9	0.2	2.0	2	0	0	2	2	2	1	Ribosomal	family	S4e
RS4NT	PF08071.12	gi|429217547|ref|YP_007175537.1|	-	4.8e-14	52.2	3.3	7.5e-14	51.6	3.3	1.3	1	0	0	1	1	1	1	RS4NT	(NUC023)	domain
S4	PF01479.25	gi|429217547|ref|YP_007175537.1|	-	3.3e-10	39.5	0.1	7.7e-10	38.3	0.1	1.7	1	0	0	1	1	1	1	S4	domain
KOW	PF00467.29	gi|429217547|ref|YP_007175537.1|	-	0.00057	19.7	0.1	0.0012	18.7	0.1	1.6	1	0	0	1	1	1	1	KOW	motif
S4_2	PF13275.6	gi|429217547|ref|YP_007175537.1|	-	0.0061	16.3	0.0	0.013	15.3	0.0	1.6	1	0	0	1	1	1	1	S4	domain
Ribosomal_L5_C	PF00673.21	gi|429217548|ref|YP_007175538.1|	-	4e-22	78.2	0.0	6.1e-22	77.6	0.0	1.4	1	0	0	1	1	1	1	ribosomal	L5P	family	C-terminus
Ribosomal_L5	PF00281.19	gi|429217548|ref|YP_007175538.1|	-	6.1e-17	61.7	0.4	1.2e-16	60.7	0.4	1.6	1	0	0	1	1	1	1	Ribosomal	protein	L5
Band_7_C	PF16200.5	gi|429217548|ref|YP_007175538.1|	-	0.1	12.6	0.0	4.9	7.3	0.0	2.3	2	0	0	2	2	2	0	C-terminal	region	of	band_7
Ribosomal_S14	PF00253.21	gi|429217549|ref|YP_007175539.1|	-	9e-14	51.0	3.2	9.8e-14	50.9	3.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S14p/S29e
DZR	PF12773.7	gi|429217549|ref|YP_007175539.1|	-	0.0018	18.3	0.3	0.0021	18.0	0.3	1.1	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-FPG_IleRS	PF06827.14	gi|429217549|ref|YP_007175539.1|	-	0.0019	18.0	2.7	0.003	17.4	2.7	1.3	1	0	0	1	1	1	1	Zinc	finger	found	in	FPG	and	IleRS
Zn_Tnp_IS91	PF14319.6	gi|429217549|ref|YP_007175539.1|	-	0.033	14.2	0.5	0.033	14.2	0.5	1.1	1	0	0	1	1	1	0	Transposase	zinc-binding	domain
Ribosomal_S8	PF00410.19	gi|429217550|ref|YP_007175540.1|	-	1.7e-24	86.2	0.1	2.6e-24	85.6	0.1	1.3	1	1	0	1	1	1	1	Ribosomal	protein	S8
Thioredoxin_3	PF13192.6	gi|429217552|ref|YP_007175542.1|	-	4.8e-29	100.2	3.2	3.3e-15	55.9	0.2	2.5	2	0	0	2	2	2	2	Thioredoxin	domain
Thioredoxin_2	PF13098.6	gi|429217552|ref|YP_007175542.1|	-	7.2e-06	26.4	0.7	0.09	13.2	0.0	3.0	2	1	0	2	2	2	2	Thioredoxin-like	domain
Thioredoxin_4	PF13462.6	gi|429217552|ref|YP_007175542.1|	-	7e-05	23.0	4.0	1	9.5	0.0	4.0	2	2	2	4	4	4	3	Thioredoxin
Thioredoxin	PF00085.20	gi|429217552|ref|YP_007175542.1|	-	0.0003	20.7	0.3	0.012	15.6	0.0	2.3	2	0	0	2	2	2	1	Thioredoxin
Glutaredoxin	PF00462.24	gi|429217552|ref|YP_007175542.1|	-	0.00038	20.6	4.6	0.075	13.3	0.2	4.1	2	2	2	4	4	4	2	Glutaredoxin
TraF	PF13728.6	gi|429217552|ref|YP_007175542.1|	-	0.00054	19.8	0.0	0.096	12.5	0.0	2.5	2	1	0	2	2	2	2	F	plasmid	transfer	operon	protein
Thioredoxin_8	PF13905.6	gi|429217552|ref|YP_007175542.1|	-	0.092	13.1	1.3	15	6.0	0.0	3.2	2	2	1	3	3	3	0	Thioredoxin-like
DUF373	PF04123.13	gi|429217553|ref|YP_007175543.1|	-	3.4e-67	227.3	10.7	4.1e-67	227.0	10.7	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF373)
DUF3798	PF12683.7	gi|429217553|ref|YP_007175543.1|	-	0.015	14.8	0.0	0.024	14.1	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3798)
tRNA_int_endo	PF01974.17	gi|429217554|ref|YP_007175544.1|	-	3.2e-05	23.9	0.1	7.3e-05	22.8	0.1	1.6	1	1	0	1	1	1	1	tRNA	intron	endonuclease,	catalytic	C-terminal	domain
Vault_3	PF17795.1	gi|429217554|ref|YP_007175544.1|	-	0.063	13.3	0.0	0.11	12.5	0.0	1.4	1	0	0	1	1	1	0	Major	Vault	Protein	Repeat	domain
CspB_prodomain	PF18425.1	gi|429217555|ref|YP_007175545.1|	-	0.0032	17.4	0.1	0.011	15.7	0.1	1.9	1	0	0	1	1	1	1	Csp	protease	B	prodomain
T2SSE	PF00437.20	gi|429217556|ref|YP_007175546.1|	-	4.5e-38	130.9	0.0	7.2e-38	130.2	0.0	1.2	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_29	PF13555.6	gi|429217556|ref|YP_007175546.1|	-	0.00041	20.0	0.1	0.00087	19.0	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
ABC_tran	PF00005.27	gi|429217556|ref|YP_007175546.1|	-	0.0012	19.3	0.0	0.0029	18.1	0.0	1.6	1	0	0	1	1	1	1	ABC	transporter
AAA_22	PF13401.6	gi|429217556|ref|YP_007175546.1|	-	0.0026	18.0	0.0	0.0057	16.9	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
NACHT	PF05729.12	gi|429217556|ref|YP_007175546.1|	-	0.0039	17.1	0.0	0.0075	16.2	0.0	1.4	1	0	0	1	1	1	1	NACHT	domain
Zeta_toxin	PF06414.12	gi|429217556|ref|YP_007175546.1|	-	0.0057	16.0	0.0	0.0095	15.2	0.0	1.3	1	0	0	1	1	1	1	Zeta	toxin
cobW	PF02492.19	gi|429217556|ref|YP_007175546.1|	-	0.0059	16.2	0.0	0.013	15.1	0.0	1.5	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_18	PF13238.6	gi|429217556|ref|YP_007175546.1|	-	0.0069	16.9	0.0	0.037	14.6	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
Mg_chelatase	PF01078.21	gi|429217556|ref|YP_007175546.1|	-	0.0086	15.5	0.0	0.017	14.5	0.0	1.4	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
TsaE	PF02367.17	gi|429217556|ref|YP_007175546.1|	-	0.011	15.7	0.0	0.032	14.2	0.0	1.7	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_16	PF13191.6	gi|429217556|ref|YP_007175546.1|	-	0.017	15.5	0.0	0.03	14.7	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
TBPIP_N	PF15517.6	gi|429217556|ref|YP_007175546.1|	-	0.042	13.9	0.1	0.11	12.6	0.1	1.7	1	0	0	1	1	1	0	TBP-interacting	protein	N-terminus
AAA_23	PF13476.6	gi|429217556|ref|YP_007175546.1|	-	0.055	14.0	0.0	0.055	14.0	0.0	2.9	3	0	0	3	3	3	0	AAA	domain
AAA_14	PF13173.6	gi|429217556|ref|YP_007175546.1|	-	0.063	13.3	0.1	0.25	11.4	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
PduV-EutP	PF10662.9	gi|429217556|ref|YP_007175546.1|	-	0.073	12.8	0.0	0.29	10.9	0.0	1.9	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
NTPase_1	PF03266.15	gi|429217556|ref|YP_007175546.1|	-	0.1	12.5	0.0	0.3	11.0	0.0	1.8	1	0	0	1	1	1	0	NTPase
AAA_30	PF13604.6	gi|429217556|ref|YP_007175546.1|	-	0.12	12.1	0.1	0.3	10.8	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
Viral_helicase1	PF01443.18	gi|429217556|ref|YP_007175546.1|	-	0.17	11.6	0.0	0.44	10.2	0.0	1.7	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
NB-ARC	PF00931.22	gi|429217556|ref|YP_007175546.1|	-	0.18	11.0	0.0	0.33	10.1	0.0	1.3	1	0	0	1	1	1	0	NB-ARC	domain
DUF3574	PF12098.8	gi|429217557|ref|YP_007175547.1|	-	0.082	12.7	0.4	0.15	11.9	0.1	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3574)
PH_15	PF17339.2	gi|429217557|ref|YP_007175547.1|	-	0.17	11.8	1.2	0.29	11.0	1.2	1.4	1	0	0	1	1	1	0	PH	domain
DS	PF01916.17	gi|429217558|ref|YP_007175548.1|	-	1.3e-90	303.6	0.0	1.5e-90	303.4	0.0	1.0	1	0	0	1	1	1	1	Deoxyhypusine	synthase
SLBB	PF10531.9	gi|429217558|ref|YP_007175548.1|	-	0.06	13.2	0.0	6.9	6.6	0.0	2.5	2	0	0	2	2	2	0	SLBB	domain
Topo-VIb_trans	PF09239.11	gi|429217559|ref|YP_007175549.1|	-	3.7e-62	208.9	0.3	8.5e-62	207.7	0.3	1.6	1	0	0	1	1	1	1	Topoisomerase	VI	B	subunit,	transducer
HATPase_c	PF02518.26	gi|429217559|ref|YP_007175549.1|	-	1.8e-11	44.5	0.0	3.9e-11	43.5	0.0	1.6	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c_3	PF13589.6	gi|429217559|ref|YP_007175549.1|	-	4.1e-11	42.8	0.0	9e-11	41.7	0.0	1.6	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
FbpA	PF05833.11	gi|429217559|ref|YP_007175549.1|	-	0.0027	16.6	0.0	0.0063	15.3	0.0	1.6	1	0	0	1	1	1	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
TP6A_N	PF04406.14	gi|429217560|ref|YP_007175550.1|	-	1.9e-22	79.0	0.1	3.1e-22	78.3	0.1	1.4	1	0	0	1	1	1	1	Type	IIB	DNA	topoisomerase
DUF2399	PF09664.10	gi|429217560|ref|YP_007175550.1|	-	0.1	12.5	0.0	0.18	11.7	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	C-terminus	(DUF2399)
PCNA_N	PF00705.18	gi|429217561|ref|YP_007175551.1|	-	4.6e-12	45.8	0.0	5.7e-11	42.2	0.0	2.1	2	0	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	N-terminal	domain
PCNA_C	PF02747.15	gi|429217561|ref|YP_007175551.1|	-	0.0042	17.2	0.3	0.13	12.4	0.3	2.9	2	1	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	C-terminal	domain
HtaA	PF04213.13	gi|429217561|ref|YP_007175551.1|	-	0.011	16.3	0.1	0.026	15.0	0.0	1.6	2	0	0	2	2	2	0	Htaa
Rad9	PF04139.13	gi|429217561|ref|YP_007175551.1|	-	0.014	14.9	0.2	0.018	14.5	0.2	1.3	1	1	0	1	1	1	0	Rad9
TCO89	PF10452.9	gi|429217561|ref|YP_007175551.1|	-	0.044	12.8	0.4	0.056	12.4	0.4	1.1	1	0	0	1	1	1	0	TORC1	subunit	TCO89
tRNA-synt_2	PF00152.20	gi|429217562|ref|YP_007175552.1|	-	3e-87	292.6	0.0	4.3e-87	292.1	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.25	gi|429217562|ref|YP_007175552.1|	-	1.7e-10	40.8	0.3	3.1e-10	39.9	0.3	1.5	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.20	gi|429217562|ref|YP_007175552.1|	-	0.052	13.0	0.1	11	5.5	0.0	2.3	2	0	0	2	2	2	0	tRNA	synthetases	class	II	core	domain	(F)
Diphthami_syn_2	PF01902.17	gi|429217563|ref|YP_007175553.1|	-	1e-52	178.8	0.1	1.2e-52	178.6	0.1	1.0	1	0	0	1	1	1	1	Diphthamide	synthase
QueC	PF06508.13	gi|429217563|ref|YP_007175553.1|	-	0.024	14.1	0.0	0.053	13.0	0.0	1.7	2	0	0	2	2	2	0	Queuosine	biosynthesis	protein	QueC
Glyco_hydro_59	PF02057.15	gi|429217563|ref|YP_007175553.1|	-	0.11	11.8	0.1	0.22	10.7	0.0	1.5	1	1	0	1	1	1	0	Glycosyl	hydrolase	family	59
TatD_DNase	PF01026.21	gi|429217564|ref|YP_007175554.1|	-	4.3e-45	154.1	0.0	5.1e-45	153.8	0.0	1.0	1	0	0	1	1	1	1	TatD	related	DNase
Endonuc_Holl	PF10107.9	gi|429217565|ref|YP_007175555.1|	-	2.8e-39	134.6	1.8	3.5e-39	134.2	1.8	1.1	1	0	0	1	1	1	1	Endonuclease	related	to	archaeal	Holliday	junction	resolvase
NanE	PF04131.14	gi|429217565|ref|YP_007175555.1|	-	0.0054	15.9	0.1	0.0079	15.4	0.1	1.3	1	0	0	1	1	1	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
DUF4263	PF14082.6	gi|429217565|ref|YP_007175555.1|	-	0.02	15.1	0.3	0.033	14.4	0.3	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4263)
DUF4446	PF14584.6	gi|429217565|ref|YP_007175555.1|	-	0.53	10.2	6.8	4.1	7.4	2.5	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4446)
CTP_synth_N	PF06418.14	gi|429217566|ref|YP_007175556.1|	-	2.3e-120	400.9	0.4	3.4e-120	400.3	0.4	1.3	1	0	0	1	1	1	1	CTP	synthase	N-terminus
GATase	PF00117.28	gi|429217566|ref|YP_007175556.1|	-	1.1e-46	159.0	0.0	2.3e-46	157.9	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.13	gi|429217566|ref|YP_007175556.1|	-	1.5e-08	34.7	0.0	7.9e-08	32.3	0.0	2.1	2	1	0	2	2	2	1	Peptidase	C26
ArsA_ATPase	PF02374.15	gi|429217566|ref|YP_007175556.1|	-	0.0064	15.7	0.4	0.014	14.6	0.3	1.7	1	1	1	2	2	2	1	Anion-transporting	ATPase
CbiA	PF01656.23	gi|429217566|ref|YP_007175556.1|	-	0.01	15.9	0.0	0.021	14.9	0.0	1.7	1	1	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ParA	PF10609.9	gi|429217566|ref|YP_007175556.1|	-	0.063	12.7	0.2	0.29	10.5	0.2	2.0	2	0	0	2	2	2	0	NUBPL	iron-transfer	P-loop	NTPase
MeaB	PF03308.16	gi|429217566|ref|YP_007175556.1|	-	0.31	10.0	2.3	0.42	9.6	0.1	2.1	2	0	0	2	2	2	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
dUTPase	PF00692.19	gi|429217567|ref|YP_007175557.1|	-	4.4e-18	65.2	0.0	1.1e-17	64.0	0.0	1.6	1	1	1	2	2	2	1	dUTPase
DCD	PF06559.11	gi|429217567|ref|YP_007175557.1|	-	8.9e-08	31.3	0.0	2.5e-07	29.8	0.0	2.0	1	1	0	1	1	1	1	2'-deoxycytidine	5'-triphosphate	deaminase	(DCD)
Radical_SAM	PF04055.21	gi|429217568|ref|YP_007175558.1|	-	3.3e-24	86.2	0.3	8.1e-24	84.9	0.1	1.7	2	0	0	2	2	2	1	Radical	SAM	superfamily
UPF0004	PF00919.20	gi|429217568|ref|YP_007175558.1|	-	3.9e-22	78.2	0.0	8e-22	77.1	0.0	1.5	1	0	0	1	1	1	1	Uncharacterized	protein	family	UPF0004
TRAM	PF01938.20	gi|429217568|ref|YP_007175558.1|	-	3.1e-10	39.9	0.3	1.3e-09	37.9	0.1	2.2	2	0	0	2	2	2	1	TRAM	domain
TRAM_2	PF18693.1	gi|429217568|ref|YP_007175558.1|	-	0.00012	22.2	0.1	0.00079	19.5	0.1	2.3	1	1	0	1	1	1	1	TRAM	domain
P21-Arc	PF04062.14	gi|429217568|ref|YP_007175558.1|	-	0.049	13.7	0.2	0.094	12.8	0.2	1.6	1	0	0	1	1	1	0	ARP2/3	complex	ARPC3	(21	kDa)	subunit
NAD_kinase	PF01513.21	gi|429217569|ref|YP_007175559.1|	-	4.2e-35	121.4	1.9	5e-34	117.8	1.9	1.9	1	1	0	1	1	1	1	ATP-NAD	kinase
Imm65	PF15582.6	gi|429217569|ref|YP_007175559.1|	-	0.026	13.4	0.0	0.04	12.8	0.0	1.3	1	0	0	1	1	1	0	Immunity	protein	65
DAGK_cat	PF00781.24	gi|429217569|ref|YP_007175559.1|	-	0.035	13.7	0.4	0.058	13.0	0.0	1.6	2	0	0	2	2	2	0	Diacylglycerol	kinase	catalytic	domain
PIN_6	PF17146.4	gi|429217570|ref|YP_007175560.1|	-	1.5e-19	70.3	0.3	2.2e-19	69.7	0.3	1.2	1	0	0	1	1	1	1	PIN	domain	of	ribonuclease
PIN_5	PF08745.11	gi|429217570|ref|YP_007175560.1|	-	0.00039	19.9	0.8	0.0027	17.2	0.1	1.9	1	1	1	2	2	2	1	PINc	domain	ribonuclease
PIN_4	PF13638.6	gi|429217570|ref|YP_007175560.1|	-	0.00082	19.7	0.5	0.00097	19.4	0.5	1.1	1	0	0	1	1	1	1	PIN	domain
Met_10	PF02475.16	gi|429217571|ref|YP_007175561.1|	-	1.9e-43	148.5	1.3	1.9e-43	148.5	1.3	1.6	2	0	0	2	2	2	1	Met-10+	like-protein
Trm5_N	PF18093.1	gi|429217571|ref|YP_007175561.1|	-	5e-13	48.7	3.7	1.3e-12	47.4	3.7	1.7	1	0	0	1	1	1	1	tRNA	methyltransferase	5	N-terminal	domain
PrmA	PF06325.13	gi|429217571|ref|YP_007175561.1|	-	1.1e-05	25.0	0.9	1.8e-05	24.3	0.9	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_31	PF13847.6	gi|429217571|ref|YP_007175561.1|	-	2.3e-05	24.2	0.7	6.2e-05	22.8	0.2	1.9	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|429217571|ref|YP_007175561.1|	-	6.6e-05	22.8	0.0	0.00012	22.0	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|429217571|ref|YP_007175561.1|	-	8e-05	23.3	0.0	0.00029	21.5	0.0	2.0	2	0	0	2	2	2	1	Methyltransferase	domain
MTS	PF05175.14	gi|429217571|ref|YP_007175561.1|	-	8.7e-05	22.1	0.1	0.00015	21.3	0.1	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_15	PF09445.10	gi|429217571|ref|YP_007175561.1|	-	0.00053	19.6	1.0	0.00092	18.8	0.2	1.8	2	0	0	2	2	2	1	RNA	cap	guanine-N2	methyltransferase
N6_Mtase	PF02384.16	gi|429217571|ref|YP_007175561.1|	-	0.00084	18.7	0.1	0.0015	17.9	0.1	1.4	1	0	0	1	1	1	1	N-6	DNA	Methylase
N6_N4_Mtase	PF01555.18	gi|429217571|ref|YP_007175561.1|	-	0.0011	18.8	0.2	0.0022	17.7	0.0	1.9	2	1	0	2	2	2	1	DNA	methylase
Cons_hypoth95	PF03602.15	gi|429217571|ref|YP_007175561.1|	-	0.0014	18.3	0.0	0.0026	17.5	0.0	1.4	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltr_RsmB-F	PF01189.17	gi|429217571|ref|YP_007175561.1|	-	0.01	15.5	0.0	0.022	14.4	0.0	1.5	1	0	0	1	1	1	0	16S	rRNA	methyltransferase	RsmB/F
FtsJ	PF01728.19	gi|429217571|ref|YP_007175561.1|	-	0.011	15.8	0.0	0.02	15.0	0.0	1.4	1	0	0	1	1	1	0	FtsJ-like	methyltransferase
Methyltransf_11	PF08241.12	gi|429217571|ref|YP_007175561.1|	-	0.034	14.8	0.0	0.11	13.2	0.0	1.8	2	0	0	2	2	2	0	Methyltransferase	domain
3H	PF02829.14	gi|429217571|ref|YP_007175561.1|	-	0.095	13.0	1.3	2.6	8.4	0.1	3.0	2	1	1	3	3	3	0	3H	domain
DUF2312	PF10073.9	gi|429217571|ref|YP_007175561.1|	-	10	5.9	8.5	0.33	10.6	0.7	2.6	4	0	0	4	4	3	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2312)
DUF1614	PF07758.11	gi|429217572|ref|YP_007175562.1|	-	1.1e-48	165.5	17.4	1.1e-48	165.5	17.4	1.5	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1614)
LPG_synthase_TM	PF03706.13	gi|429217573|ref|YP_007175563.1|	-	4.1e-21	75.8	10.1	5.7e-21	75.3	10.1	1.1	1	0	0	1	1	1	1	Lysylphosphatidylglycerol	synthase	TM	region
ComR_TPR	PF18710.1	gi|429217573|ref|YP_007175563.1|	-	0.043	13.4	2.0	0.068	12.7	2.0	1.4	1	0	0	1	1	1	0	ComR	tetratricopeptide
Radical_SAM	PF04055.21	gi|429217574|ref|YP_007175564.1|	-	9.1e-16	58.7	0.0	1.2e-14	55.0	0.0	2.2	2	0	0	2	2	2	1	Radical	SAM	superfamily
B12-binding	PF02310.19	gi|429217574|ref|YP_007175564.1|	-	0.038	14.0	0.0	0.44	10.6	0.0	2.4	2	0	0	2	2	2	0	B12	binding	domain
AAA	PF00004.29	gi|429217576|ref|YP_007175566.1|	-	5.5e-96	318.0	0.0	5.1e-48	162.8	0.0	2.4	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_lid_3	PF17862.1	gi|429217576|ref|YP_007175566.1|	-	2.9e-36	123.0	2.9	3.5e-18	65.1	0.2	3.0	2	1	0	2	2	2	2	AAA+	lid	domain
CDC48_N	PF02359.18	gi|429217576|ref|YP_007175566.1|	-	1.3e-32	111.8	0.8	1.9e-31	108.0	2.6	2.1	2	0	0	2	2	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
RuvB_N	PF05496.12	gi|429217576|ref|YP_007175566.1|	-	6.4e-15	55.3	0.0	9.8e-07	28.6	0.0	3.4	4	1	0	4	4	2	2	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_16	PF13191.6	gi|429217576|ref|YP_007175566.1|	-	8.7e-14	52.3	0.5	3.3e-06	27.6	0.0	3.5	2	1	1	3	3	3	2	AAA	ATPase	domain
CDC48_2	PF02933.17	gi|429217576|ref|YP_007175566.1|	-	2.7e-13	49.5	4.0	6.5e-13	48.3	1.6	2.7	2	1	0	2	2	2	1	Cell	division	protein	48	(CDC48),	domain	2
AAA_2	PF07724.14	gi|429217576|ref|YP_007175566.1|	-	5.2e-12	46.2	0.0	6.3e-06	26.4	0.0	2.5	2	0	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
TIP49	PF06068.13	gi|429217576|ref|YP_007175566.1|	-	9.8e-11	41.4	0.1	0.00047	19.5	0.0	3.3	3	0	0	3	3	3	2	TIP49	P-loop	domain
AAA_33	PF13671.6	gi|429217576|ref|YP_007175566.1|	-	1e-10	41.9	0.0	0.00044	20.4	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_22	PF13401.6	gi|429217576|ref|YP_007175566.1|	-	2.2e-10	40.9	1.5	0.02	15.2	0.0	4.2	2	2	2	4	4	4	2	AAA	domain
AAA_14	PF13173.6	gi|429217576|ref|YP_007175566.1|	-	1.1e-09	38.4	0.0	0.00037	20.5	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
AAA_5	PF07728.14	gi|429217576|ref|YP_007175566.1|	-	3.1e-09	37.0	2.4	0.0052	16.8	0.3	4.0	2	2	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
IstB_IS21	PF01695.17	gi|429217576|ref|YP_007175566.1|	-	6.3e-08	32.6	0.0	0.015	15.0	0.0	2.5	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
AAA_18	PF13238.6	gi|429217576|ref|YP_007175566.1|	-	4.2e-07	30.6	0.0	0.063	13.8	0.0	2.8	2	0	0	2	2	2	2	AAA	domain
Mg_chelatase	PF01078.21	gi|429217576|ref|YP_007175566.1|	-	6.6e-07	28.9	0.5	0.04	13.3	0.1	2.6	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_28	PF13521.6	gi|429217576|ref|YP_007175566.1|	-	1.1e-06	29.0	0.0	0.068	13.4	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
Sigma54_activat	PF00158.26	gi|429217576|ref|YP_007175566.1|	-	3.2e-06	26.9	0.0	0.057	13.1	0.0	3.2	2	1	0	2	2	2	2	Sigma-54	interaction	domain
Vps4_C	PF09336.10	gi|429217576|ref|YP_007175566.1|	-	5.7e-06	26.2	0.3	0.0038	17.2	0.0	3.2	3	0	0	3	3	3	1	Vps4	C	terminal	oligomerisation	domain
AAA_24	PF13479.6	gi|429217576|ref|YP_007175566.1|	-	9.9e-06	25.4	0.2	0.095	12.4	0.0	2.7	2	1	0	2	2	2	2	AAA	domain
AAA_7	PF12775.7	gi|429217576|ref|YP_007175566.1|	-	1.1e-05	25.0	0.1	0.15	11.6	0.0	2.9	2	1	0	2	2	2	2	P-loop	containing	dynein	motor	region
RNA_helicase	PF00910.22	gi|429217576|ref|YP_007175566.1|	-	1.6e-05	25.3	0.0	0.4	11.1	0.0	2.9	3	0	0	3	3	2	2	RNA	helicase
PhoH	PF02562.16	gi|429217576|ref|YP_007175566.1|	-	2e-05	24.2	1.1	0.19	11.2	0.1	2.6	2	0	0	2	2	2	2	PhoH-like	protein
Zeta_toxin	PF06414.12	gi|429217576|ref|YP_007175566.1|	-	2.4e-05	23.7	0.1	0.17	11.1	0.0	2.6	2	0	0	2	2	2	2	Zeta	toxin
ATPase	PF06745.13	gi|429217576|ref|YP_007175566.1|	-	4.2e-05	23.0	1.0	0.6	9.4	0.0	3.5	2	1	0	3	3	3	2	KaiC
ABC_tran	PF00005.27	gi|429217576|ref|YP_007175566.1|	-	4.4e-05	24.0	0.0	0.45	11.0	0.0	2.5	2	0	0	2	2	2	2	ABC	transporter
TsaE	PF02367.17	gi|429217576|ref|YP_007175566.1|	-	0.00014	21.8	0.1	0.73	9.8	0.1	2.9	2	1	1	3	3	3	2	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
DUF815	PF05673.13	gi|429217576|ref|YP_007175566.1|	-	0.0002	20.6	0.0	0.3	10.2	0.0	2.8	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
ATPase_2	PF01637.18	gi|429217576|ref|YP_007175566.1|	-	0.00031	20.7	0.7	1.8	8.4	0.1	3.9	2	2	1	3	3	3	1	ATPase	domain	predominantly	from	Archaea
Parvo_NS1	PF01057.17	gi|429217576|ref|YP_007175566.1|	-	0.0004	19.6	0.1	0.55	9.3	0.0	2.3	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
AAA_3	PF07726.11	gi|429217576|ref|YP_007175566.1|	-	0.00044	20.1	0.0	1.4	8.8	0.0	2.6	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
UFD1	PF03152.14	gi|429217576|ref|YP_007175566.1|	-	0.0018	17.8	0.2	0.017	14.6	0.2	2.2	1	1	1	2	2	2	1	Ubiquitin	fusion	degradation	protein	UFD1
AAA_19	PF13245.6	gi|429217576|ref|YP_007175566.1|	-	0.002	18.5	2.2	3.5	7.9	0.1	3.3	2	1	1	3	3	3	1	AAA	domain
Sigma54_activ_2	PF14532.6	gi|429217576|ref|YP_007175566.1|	-	0.0024	18.0	0.0	3.3	7.8	0.0	2.6	2	0	0	2	2	2	1	Sigma-54	interaction	domain
NACHT	PF05729.12	gi|429217576|ref|YP_007175566.1|	-	0.0049	16.8	1.7	3.6	7.5	0.1	3.0	3	0	0	3	3	2	0	NACHT	domain
DUF2075	PF09848.9	gi|429217576|ref|YP_007175566.1|	-	0.0051	16.1	0.0	2.4	7.3	0.0	2.5	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_17	PF13207.6	gi|429217576|ref|YP_007175566.1|	-	0.0056	17.1	0.0	7.8	6.9	0.0	3.0	3	0	0	3	3	2	0	AAA	domain
AAA_30	PF13604.6	gi|429217576|ref|YP_007175566.1|	-	0.007	16.1	2.9	2.6	7.7	0.4	3.0	2	1	0	2	2	2	1	AAA	domain
AFG1_ATPase	PF03969.16	gi|429217576|ref|YP_007175566.1|	-	0.0099	14.8	0.0	2.4	7.0	0.0	2.4	2	0	0	2	2	2	1	AFG1-like	ATPase
AAA_11	PF13086.6	gi|429217576|ref|YP_007175566.1|	-	0.013	15.3	0.0	5.9	6.6	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
Rad17	PF03215.15	gi|429217576|ref|YP_007175566.1|	-	0.017	15.0	0.0	2.3	8.1	0.0	3.0	2	1	1	3	3	3	0	Rad17	P-loop	domain
AAA_25	PF13481.6	gi|429217576|ref|YP_007175566.1|	-	0.023	14.3	10.8	1.5	8.3	1.2	3.9	2	2	0	2	2	2	0	AAA	domain
NB-ARC	PF00931.22	gi|429217576|ref|YP_007175566.1|	-	0.027	13.7	0.0	6.5	5.9	0.0	2.5	2	0	0	2	2	2	0	NB-ARC	domain
IPT	PF01745.16	gi|429217576|ref|YP_007175566.1|	-	0.027	13.8	0.1	2.6	7.3	0.0	2.4	2	0	0	2	2	2	0	Isopentenyl	transferase
AAA_29	PF13555.6	gi|429217576|ref|YP_007175566.1|	-	0.04	13.7	0.0	11	5.9	0.0	2.5	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
PduV-EutP	PF10662.9	gi|429217576|ref|YP_007175566.1|	-	0.051	13.3	0.0	11	5.7	0.0	2.6	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
MazE_antitoxin	PF04014.18	gi|429217576|ref|YP_007175566.1|	-	0.061	13.3	1.4	1.8	8.6	0.2	3.1	2	0	0	2	2	2	0	Antidote-toxin	recognition	MazE,	bacterial	antitoxin
ADSL_C	PF10397.9	gi|429217576|ref|YP_007175566.1|	-	0.063	13.8	0.8	14	6.4	0.0	3.2	4	0	0	4	4	2	0	Adenylosuccinate	lyase	C-terminus
NTPase_1	PF03266.15	gi|429217576|ref|YP_007175566.1|	-	0.065	13.1	1.9	24	4.8	0.0	3.7	2	1	1	3	3	3	0	NTPase
Bac_DnaA	PF00308.18	gi|429217576|ref|YP_007175566.1|	-	0.08	12.8	0.0	9.3	6.0	0.0	2.6	2	1	0	2	2	2	0	Bacterial	dnaA	protein
BOFC_N	PF08977.10	gi|429217576|ref|YP_007175566.1|	-	0.082	12.9	0.2	5.3	7.1	0.1	2.4	2	0	0	2	2	2	0	Bypass	of	Forespore	C,	N	terminal
HTH_12	PF08461.10	gi|429217577|ref|YP_007175567.1|	-	0.0066	16.4	0.1	0.0084	16.0	0.1	1.2	1	0	0	1	1	1	1	Ribonuclease	R	winged-helix	domain
DUF1456	PF07308.13	gi|429217577|ref|YP_007175567.1|	-	0.1	12.9	0.2	0.37	11.2	0.2	2.0	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1456)
XPG_I	PF00867.18	gi|429217578|ref|YP_007175568.1|	-	1.5e-27	95.8	0.0	3.7e-27	94.5	0.0	1.7	2	0	0	2	2	2	1	XPG	I-region
XPG_N	PF00752.17	gi|429217578|ref|YP_007175568.1|	-	1.7e-21	76.6	0.0	4.2e-21	75.3	0.0	1.7	2	0	0	2	2	2	1	XPG	N-terminal	domain
MIase	PF02426.16	gi|429217578|ref|YP_007175568.1|	-	0.09	12.9	0.2	0.2	11.8	0.2	1.5	1	0	0	1	1	1	0	Muconolactone	delta-isomerase
DUF1771	PF08590.10	gi|429217578|ref|YP_007175568.1|	-	9.8	6.6	12.0	0.82	10.1	6.4	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1771)
KH_5	PF13184.6	gi|429217579|ref|YP_007175569.1|	-	0.00037	20.5	0.1	0.0073	16.4	0.0	2.5	2	0	0	2	2	2	1	NusA-like	KH	domain
Csm1_B	PF18211.1	gi|429217579|ref|YP_007175569.1|	-	0.02	14.8	0.0	0.1	12.4	0.0	2.1	1	1	1	2	2	2	0	Csm1	subunit	domain	B
ATP-synt_C	PF00137.21	gi|429217580|ref|YP_007175570.1|	-	7.4e-17	61.5	19.7	7.4e-17	61.5	19.7	2.3	2	1	0	2	2	2	1	ATP	synthase	subunit	C
DUF4148	PF13663.6	gi|429217580|ref|YP_007175570.1|	-	0.12	12.6	1.1	0.22	11.7	0.1	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4148)
Stevor	PF17410.2	gi|429217580|ref|YP_007175570.1|	-	1.8	8.1	5.3	2.6	7.5	5.3	1.2	1	0	0	1	1	1	0	Subtelomeric	Variable	Open	Reading	frame
DUF1673	PF07895.11	gi|429217580|ref|YP_007175570.1|	-	4.4	6.9	6.4	13	5.4	0.2	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1673)
tRNA-synt_2b	PF00587.25	gi|429217581|ref|YP_007175571.1|	-	9.4e-26	90.9	0.0	1.7e-25	90.1	0.0	1.4	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.20	gi|429217581|ref|YP_007175571.1|	-	3.4e-19	68.8	0.4	8.5e-19	67.5	0.2	1.9	2	0	0	2	2	2	1	Anticodon	binding	domain
ProRS-C_1	PF09180.11	gi|429217581|ref|YP_007175571.1|	-	3.2e-16	59.3	1.4	9.1e-16	57.8	0.5	2.1	2	0	0	2	2	2	1	Prolyl-tRNA	synthetase,	C-terminal
Elf1	PF05129.13	gi|429217581|ref|YP_007175571.1|	-	0.029	14.4	0.7	1.3	9.1	0.0	2.4	2	0	0	2	2	2	0	Transcription	elongation	factor	Elf1	like
MFS_1	PF07690.16	gi|429217582|ref|YP_007175572.1|	-	8e-22	77.6	45.8	8e-22	77.6	45.8	1.6	2	0	0	2	2	2	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.24	gi|429217582|ref|YP_007175572.1|	-	2.7e-09	36.4	32.1	3.4e-07	29.5	12.0	2.3	2	1	0	2	2	2	2	Sugar	(and	other)	transporter
MFS_1	PF07690.16	gi|429217583|ref|YP_007175573.1|	-	5e-14	52.0	46.9	5e-14	52.0	46.9	2.1	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
Methyltransf_11	PF08241.12	gi|429217584|ref|YP_007175574.1|	-	2.5e-14	53.7	0.0	8.2e-14	52.0	0.0	1.8	2	0	0	2	2	2	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|429217584|ref|YP_007175574.1|	-	4.6e-13	49.1	0.4	5.7e-13	48.7	0.4	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_25	PF13649.6	gi|429217584|ref|YP_007175574.1|	-	1.4e-12	48.1	0.0	2.7e-12	47.2	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|429217584|ref|YP_007175574.1|	-	1.9e-07	31.0	0.0	2.3e-07	30.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|429217584|ref|YP_007175574.1|	-	3.1e-06	27.1	0.1	2.1e-05	24.4	0.0	2.1	1	1	1	2	2	2	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|429217584|ref|YP_007175574.1|	-	3.2e-06	27.8	0.0	1.4e-05	25.7	0.0	1.9	2	0	0	2	2	2	1	Methyltransferase	domain
NNMT_PNMT_TEMT	PF01234.17	gi|429217584|ref|YP_007175574.1|	-	0.0027	16.9	0.0	0.24	10.6	0.0	2.2	2	0	0	2	2	2	1	NNMT/PNMT/TEMT	family
Methyltransf_8	PF05148.15	gi|429217584|ref|YP_007175574.1|	-	0.0057	16.5	0.0	0.0093	15.8	0.0	1.5	1	0	0	1	1	1	1	Hypothetical	methyltransferase
Methyltr_RsmB-F	PF01189.17	gi|429217584|ref|YP_007175574.1|	-	0.042	13.5	0.0	0.065	12.9	0.0	1.4	1	0	0	1	1	1	0	16S	rRNA	methyltransferase	RsmB/F
polyprenyl_synt	PF00348.17	gi|429217585|ref|YP_007175575.1|	-	1.8e-38	132.0	0.1	2.5e-38	131.6	0.1	1.1	1	0	0	1	1	1	1	Polyprenyl	synthetase
QIL1	PF15884.5	gi|429217585|ref|YP_007175575.1|	-	0.18	12.4	0.1	5.5	7.7	0.0	2.4	2	0	0	2	2	2	0	MICOS	complex	subunit	MIC13,	QIL1
PCMT	PF01135.19	gi|429217586|ref|YP_007175576.1|	-	2.3e-70	236.6	0.1	2.7e-70	236.4	0.1	1.0	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_31	PF13847.6	gi|429217586|ref|YP_007175576.1|	-	3.5e-07	30.2	0.0	5.3e-07	29.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltr_RsmB-F	PF01189.17	gi|429217586|ref|YP_007175576.1|	-	7.6e-07	29.0	0.0	1e-06	28.6	0.0	1.2	1	0	0	1	1	1	1	16S	rRNA	methyltransferase	RsmB/F
Methyltransf_3	PF01596.17	gi|429217586|ref|YP_007175576.1|	-	7.8e-07	28.5	0.0	9.3e-07	28.2	0.0	1.3	1	0	0	1	1	1	1	O-methyltransferase
RrnaAD	PF00398.20	gi|429217586|ref|YP_007175576.1|	-	9.7e-06	24.8	0.1	2.3e-05	23.6	0.0	1.5	2	0	0	2	2	2	1	Ribosomal	RNA	adenine	dimethylase
GCD14	PF08704.10	gi|429217586|ref|YP_007175576.1|	-	8.6e-05	22.3	0.0	0.00012	21.9	0.0	1.2	1	0	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
Methyltransf_18	PF12847.7	gi|429217586|ref|YP_007175576.1|	-	0.0005	20.0	0.0	0.00085	19.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|429217586|ref|YP_007175576.1|	-	0.00073	18.9	0.0	0.0012	18.3	0.0	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_25	PF13649.6	gi|429217586|ref|YP_007175576.1|	-	0.00083	20.0	0.0	0.0014	19.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_24	PF13578.6	gi|429217586|ref|YP_007175576.1|	-	0.001	20.1	0.0	0.0015	19.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.20	gi|429217586|ref|YP_007175576.1|	-	0.0019	17.6	0.0	0.003	16.9	0.0	1.3	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_32	PF13679.6	gi|429217586|ref|YP_007175576.1|	-	0.0037	17.3	0.0	0.0054	16.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Fibrillarin	PF01269.17	gi|429217586|ref|YP_007175576.1|	-	0.0059	15.7	0.1	0.009	15.1	0.1	1.3	1	0	0	1	1	1	1	Fibrillarin
Methyltransf_11	PF08241.12	gi|429217586|ref|YP_007175576.1|	-	0.021	15.5	0.0	0.035	14.7	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_16	PF10294.9	gi|429217586|ref|YP_007175576.1|	-	0.051	13.3	0.0	0.069	12.9	0.0	1.2	1	0	0	1	1	1	0	Lysine	methyltransferase
ISN1	PF06437.11	gi|429217586|ref|YP_007175576.1|	-	0.14	11.0	0.5	0.26	10.1	0.4	1.4	1	1	0	1	1	1	0	IMP-specific	5'-nucleotidase
MTS	PF05175.14	gi|429217586|ref|YP_007175576.1|	-	0.15	11.6	0.0	0.27	10.8	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	small	domain
GTP_EFTU	PF00009.27	gi|429217587|ref|YP_007175577.1|	-	5.3e-60	202.3	0.1	8e-60	201.7	0.1	1.3	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
EFG_IV	PF03764.18	gi|429217587|ref|YP_007175577.1|	-	3.7e-31	107.4	0.0	3.2e-30	104.4	0.0	2.7	2	1	1	3	3	3	1	Elongation	factor	G,	domain	IV
EFG_II	PF14492.6	gi|429217587|ref|YP_007175577.1|	-	9.4e-24	83.3	0.1	3e-23	81.7	0.1	2.0	1	0	0	1	1	1	1	Elongation	Factor	G,	domain	II
EFG_C	PF00679.24	gi|429217587|ref|YP_007175577.1|	-	5.3e-23	80.9	0.0	3.9e-22	78.1	0.0	2.3	2	0	0	2	2	2	1	Elongation	factor	G	C-terminus
GTP_EFTU_D2	PF03144.25	gi|429217587|ref|YP_007175577.1|	-	1.6e-13	50.8	0.1	4.5e-13	49.4	0.1	1.8	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
HIGH_NTase1_ass	PF16581.5	gi|429217587|ref|YP_007175577.1|	-	0.0016	18.5	0.0	0.0049	16.9	0.0	1.8	1	0	0	1	1	1	1	Cytidyltransferase-related	C-terminal	region
MMR_HSR1	PF01926.23	gi|429217587|ref|YP_007175577.1|	-	0.0026	17.8	0.1	0.0054	16.8	0.1	1.5	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
Ras	PF00071.22	gi|429217587|ref|YP_007175577.1|	-	0.024	14.2	0.0	0.045	13.3	0.0	1.4	1	0	0	1	1	1	0	Ras	family
SRPRB	PF09439.10	gi|429217587|ref|YP_007175577.1|	-	0.026	13.9	0.0	0.069	12.6	0.0	1.7	1	1	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
RF3_C	PF16658.5	gi|429217587|ref|YP_007175577.1|	-	0.094	12.5	0.0	0.2	11.5	0.0	1.5	1	0	0	1	1	1	0	Class	II	release	factor	RF3,	C-terminal	domain
DUF371	PF04027.13	gi|429217589|ref|YP_007175579.1|	-	2.2e-48	163.6	0.2	2.6e-48	163.4	0.2	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF371)
YIEGIA	PF14045.6	gi|429217589|ref|YP_007175579.1|	-	0.011	14.7	0.1	0.079	11.8	0.0	2.1	1	1	1	2	2	2	0	YIEGIA	protein
ERCC4	PF02732.15	gi|429217590|ref|YP_007175580.1|	-	9e-24	84.4	0.4	1.3e-23	83.9	0.4	1.3	1	0	0	1	1	1	1	ERCC4	domain
HHH_5	PF14520.6	gi|429217590|ref|YP_007175580.1|	-	1.3e-08	35.3	0.1	3.1e-08	34.1	0.1	1.6	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
HHH_2	PF12826.7	gi|429217590|ref|YP_007175580.1|	-	4.5e-06	26.7	0.0	1.4e-05	25.1	0.0	1.8	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
HHH	PF00633.23	gi|429217590|ref|YP_007175580.1|	-	0.00021	21.0	0.1	0.03	14.2	0.0	3.0	2	1	0	2	2	2	1	Helix-hairpin-helix	motif
5_3_exonuc	PF01367.20	gi|429217590|ref|YP_007175580.1|	-	0.00031	21.3	0.9	0.0012	19.4	0.1	2.2	2	0	0	2	2	2	1	5'-3'	exonuclease,	C-terminal	SAM	fold
HHH_8	PF14716.6	gi|429217590|ref|YP_007175580.1|	-	0.038	14.4	0.1	0.6	10.5	0.0	2.4	2	0	0	2	2	2	0	Helix-hairpin-helix	domain
IMS_HHH	PF11798.8	gi|429217590|ref|YP_007175580.1|	-	0.046	14.1	0.0	0.15	12.4	0.0	1.9	1	0	0	1	1	1	0	IMS	family	HHH	motif
HHH_3	PF12836.7	gi|429217590|ref|YP_007175580.1|	-	0.061	13.6	0.1	0.51	10.6	0.1	2.4	1	1	0	1	1	1	0	Helix-hairpin-helix	motif
DHH	PF01368.20	gi|429217591|ref|YP_007175581.1|	-	9.6e-14	51.5	0.4	2e-13	50.4	0.4	1.5	1	0	0	1	1	1	1	DHH	family
DHHA1	PF02272.19	gi|429217591|ref|YP_007175581.1|	-	1.9e-10	41.3	0.7	5.7e-10	39.7	0.7	1.9	1	0	0	1	1	1	1	DHHA1	domain
Prefoldin_2	PF01920.20	gi|429217592|ref|YP_007175582.1|	-	5.6e-22	77.7	10.6	6.3e-22	77.5	10.6	1.0	1	0	0	1	1	1	1	Prefoldin	subunit
Baculo_PEP_C	PF04513.12	gi|429217592|ref|YP_007175582.1|	-	0.062	13.3	0.7	0.13	12.3	0.6	1.6	1	1	0	1	1	1	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
GLE1	PF07817.13	gi|429217592|ref|YP_007175582.1|	-	0.067	12.4	0.5	0.092	11.9	0.5	1.2	1	0	0	1	1	1	0	GLE1-like	protein
DUF724	PF05266.14	gi|429217592|ref|YP_007175582.1|	-	0.19	11.5	5.8	0.29	10.9	5.8	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF724)
DUF3584	PF12128.8	gi|429217592|ref|YP_007175582.1|	-	0.3	8.6	5.4	0.19	9.2	3.9	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
FlxA	PF14282.6	gi|429217592|ref|YP_007175582.1|	-	0.3	11.1	7.3	0.22	11.5	5.4	1.6	2	0	0	2	2	2	0	FlxA-like	protein
FlaC_arch	PF05377.11	gi|429217592|ref|YP_007175582.1|	-	0.47	10.9	8.8	0.51	10.8	5.2	2.2	2	0	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
YojJ	PF10372.9	gi|429217592|ref|YP_007175582.1|	-	2.1	8.5	6.7	6.7	6.9	5.4	2.2	2	1	0	2	2	2	0	Bacterial	membrane-spanning	protein	N-terminus
DivIC	PF04977.15	gi|429217592|ref|YP_007175582.1|	-	5	7.0	9.0	0.77	9.6	4.9	1.7	2	0	0	2	2	2	0	Septum	formation	initiator
Oxidored_q4	PF00507.19	gi|429217593|ref|YP_007175583.1|	-	8.8e-08	32.2	1.8	8.8e-08	32.2	1.8	1.7	1	1	1	2	2	2	1	NADH-ubiquinone/plastoquinone	oxidoreductase,	chain	3
OAD_gamma	PF04277.13	gi|429217593|ref|YP_007175583.1|	-	0.14	12.7	0.2	0.14	12.7	0.2	2.5	2	1	0	2	2	2	0	Oxaloacetate	decarboxylase,	gamma	chain
Oxidored_q6	PF01058.22	gi|429217594|ref|YP_007175584.1|	-	5.5e-20	71.5	0.1	1e-19	70.7	0.1	1.4	1	0	0	1	1	1	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
DsrD	PF08679.11	gi|429217594|ref|YP_007175584.1|	-	0.028	14.7	0.1	0.08	13.2	0.0	1.8	2	0	0	2	2	2	0	Dissimilatory	sulfite	reductase	D	(DsrD)
TB	PF00683.17	gi|429217594|ref|YP_007175584.1|	-	1.3	8.9	5.7	0.26	11.0	0.6	2.3	3	0	0	3	3	3	0	TB	domain
Complex1_30kDa	PF00329.19	gi|429217595|ref|YP_007175585.1|	-	2e-31	109.1	0.0	2.5e-31	108.8	0.0	1.1	1	0	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase,	30	Kd	subunit
SbsC_C	PF18058.1	gi|429217595|ref|YP_007175585.1|	-	0.015	15.5	0.2	0.027	14.7	0.2	1.5	1	0	0	1	1	1	0	SbsC	C-terminal	domain
Complex1_49kDa	PF00346.19	gi|429217596|ref|YP_007175586.1|	-	5.1e-88	294.7	0.0	7.1e-88	294.2	0.0	1.1	1	0	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase,	49	Kd	subunit
NiFeSe_Hases	PF00374.19	gi|429217596|ref|YP_007175586.1|	-	0.12	11.3	0.0	0.25	10.2	0.0	1.5	1	0	0	1	1	1	0	Nickel-dependent	hydrogenase
NADHdh	PF00146.21	gi|429217597|ref|YP_007175587.1|	-	9e-79	264.9	22.1	1.2e-78	264.5	22.1	1.0	1	0	0	1	1	1	1	NADH	dehydrogenase
Fer4	PF00037.27	gi|429217598|ref|YP_007175588.1|	-	1.4e-15	56.4	12.7	1.4e-09	37.4	3.8	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|429217598|ref|YP_007175588.1|	-	1.6e-12	47.4	17.3	3.6e-08	33.4	10.6	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|429217598|ref|YP_007175588.1|	-	8.3e-11	42.3	7.5	2e-10	41.1	7.5	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|429217598|ref|YP_007175588.1|	-	9.8e-11	41.3	12.2	6.5e-06	26.0	3.1	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|429217598|ref|YP_007175588.1|	-	1.4e-09	37.9	7.1	2.7e-09	37.0	7.1	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|429217598|ref|YP_007175588.1|	-	1.4e-08	34.3	11.3	0.00063	19.7	3.2	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|429217598|ref|YP_007175588.1|	-	3.8e-08	34.1	10.8	0.00082	20.3	0.7	2.9	2	1	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.6	gi|429217598|ref|YP_007175588.1|	-	4.9e-08	33.0	19.7	8.7e-07	29.0	9.5	1.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|429217598|ref|YP_007175588.1|	-	9.2e-07	28.9	10.7	0.0049	17.3	2.4	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|429217598|ref|YP_007175588.1|	-	4.2e-06	27.1	16.0	0.00021	21.7	9.0	2.3	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|429217598|ref|YP_007175588.1|	-	0.00016	22.1	11.7	0.0062	17.1	1.0	2.6	1	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|429217598|ref|YP_007175588.1|	-	0.00023	21.9	3.7	0.13	13.0	0.1	2.7	3	0	0	3	3	3	2	4Fe-4S	single	cluster	domain
Fer4_3	PF12798.7	gi|429217598|ref|YP_007175588.1|	-	0.00093	20.0	15.3	0.014	16.2	3.8	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|429217598|ref|YP_007175588.1|	-	0.0076	16.8	14.7	0.18	12.4	0.3	3.0	3	0	0	3	3	3	2	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_18	PF13746.6	gi|429217598|ref|YP_007175588.1|	-	0.021	15.0	15.1	0.043	14.0	1.5	3.0	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Redoxin	PF08534.10	gi|429217598|ref|YP_007175588.1|	-	0.12	12.1	0.0	0.2	11.4	0.0	1.4	1	0	0	1	1	1	0	Redoxin
Fer4_22	PF17179.4	gi|429217598|ref|YP_007175588.1|	-	0.15	13.0	13.1	0.91	10.4	1.7	2.5	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Oxidored_q3	PF00499.20	gi|429217599|ref|YP_007175589.1|	-	3.7e-08	33.2	22.8	4.9e-08	32.8	22.8	1.2	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	6
Cyt_bd_oxida_II	PF02322.15	gi|429217599|ref|YP_007175589.1|	-	0.0022	17.4	17.1	0.0026	17.2	17.1	1.0	1	0	0	1	1	1	1	Cytochrome	bd	terminal	oxidase	subunit	II
DUF3810	PF12725.7	gi|429217599|ref|YP_007175589.1|	-	0.43	9.9	5.6	0.52	9.6	5.6	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3810)
Oxidored_q2	PF00420.24	gi|429217600|ref|YP_007175590.1|	-	4.7e-10	39.0	10.2	6.3e-10	38.6	10.2	1.2	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
DUF4491	PF14898.6	gi|429217600|ref|YP_007175590.1|	-	0.79	10.2	10.9	0.67	10.4	9.8	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4491)
Proton_antipo_M	PF00361.20	gi|429217601|ref|YP_007175591.1|	-	2.6e-64	217.3	33.3	7.4e-64	215.8	33.3	1.9	1	0	0	1	1	1	1	Proton-conducting	membrane	transporter
Proton_antipo_N	PF00662.20	gi|429217601|ref|YP_007175591.1|	-	0.0061	16.6	0.3	0.0061	16.6	0.3	3.2	3	0	0	3	3	3	1	NADH-Ubiquinone	oxidoreductase	(complex	I),	chain	5	N-terminus
Proton_antipo_M	PF00361.20	gi|429217602|ref|YP_007175592.1|	-	1.7e-45	155.5	38.0	9.1e-42	143.2	34.8	5.9	5	2	0	5	5	5	2	Proton-conducting	membrane	transporter
Proton_antipo_N	PF00662.20	gi|429217602|ref|YP_007175592.1|	-	4.6e-14	52.2	2.7	4.6e-14	52.2	2.7	4.1	4	0	0	4	4	4	1	NADH-Ubiquinone	oxidoreductase	(complex	I),	chain	5	N-terminus
Proton_antipo_M	PF00361.20	gi|429217603|ref|YP_007175593.1|	-	2.8e-34	118.7	32.1	2.8e-34	118.7	32.1	1.7	2	0	0	2	2	2	1	Proton-conducting	membrane	transporter
CoxIIa	PF08113.11	gi|429217603|ref|YP_007175593.1|	-	3.7	7.4	13.4	1.2	9.0	2.1	4.2	3	0	0	3	3	3	0	Cytochrome	c	oxidase	subunit	IIa	family
RHH_1	PF01402.21	gi|429217604|ref|YP_007175594.1|	-	6.1e-09	35.5	0.1	8.8e-09	35.0	0.1	1.2	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
RHH_3	PF12651.7	gi|429217604|ref|YP_007175594.1|	-	2.7e-08	33.6	2.0	3.5e-08	33.3	2.0	1.2	1	0	0	1	1	1	1	Ribbon-helix-helix	domain
SBP_bac_11	PF13531.6	gi|429217605|ref|YP_007175595.1|	-	1.7e-29	103.2	0.0	2.1e-29	102.9	0.0	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
B277	PF17623.2	gi|429217605|ref|YP_007175595.1|	-	0.0081	15.3	4.4	0.015	14.4	4.4	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function
BPD_transp_1	PF00528.22	gi|429217606|ref|YP_007175596.1|	-	2.8e-20	72.8	16.2	2.8e-20	72.8	16.2	2.1	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
ABC_tran	PF00005.27	gi|429217607|ref|YP_007175597.1|	-	1.2e-33	116.6	0.0	2.2e-33	115.7	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|429217607|ref|YP_007175597.1|	-	4.1e-11	43.3	5.9	2e-05	24.6	0.2	2.9	1	1	2	3	3	3	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|429217607|ref|YP_007175597.1|	-	3.2e-06	26.8	1.5	1.5e-05	24.6	1.5	1.9	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
cobW	PF02492.19	gi|429217607|ref|YP_007175597.1|	-	0.00011	21.8	0.3	0.00078	19.1	0.3	2.2	1	1	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
T2SSE	PF00437.20	gi|429217607|ref|YP_007175597.1|	-	0.00025	20.2	0.2	0.00078	18.6	0.0	1.9	1	1	1	2	2	2	1	Type	II/IV	secretion	system	protein
AAA_29	PF13555.6	gi|429217607|ref|YP_007175597.1|	-	0.0013	18.4	0.1	0.0026	17.5	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.6	gi|429217607|ref|YP_007175597.1|	-	0.0033	17.7	1.2	0.017	15.4	1.2	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_14	PF13173.6	gi|429217607|ref|YP_007175597.1|	-	0.0047	17.0	0.4	0.02	14.9	0.4	2.3	1	1	0	1	1	1	1	AAA	domain
DUF3584	PF12128.8	gi|429217607|ref|YP_007175597.1|	-	0.006	14.2	0.1	0.0097	13.5	0.1	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3584)
AAA_5	PF07728.14	gi|429217607|ref|YP_007175597.1|	-	0.0067	16.4	0.1	0.17	11.8	0.1	2.5	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.6	gi|429217607|ref|YP_007175597.1|	-	0.0069	16.8	0.0	0.012	15.9	0.0	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
NACHT	PF05729.12	gi|429217607|ref|YP_007175597.1|	-	0.016	15.2	1.0	0.04	13.8	0.1	1.9	2	0	0	2	2	2	0	NACHT	domain
ATPase_2	PF01637.18	gi|429217607|ref|YP_007175597.1|	-	0.02	14.8	4.8	0.017	15.1	2.8	1.9	2	1	0	2	2	1	0	ATPase	domain	predominantly	from	Archaea
DUF3490	PF11995.8	gi|429217607|ref|YP_007175597.1|	-	0.02	14.7	0.6	0.041	13.7	0.6	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3490)
AAA_23	PF13476.6	gi|429217607|ref|YP_007175597.1|	-	0.023	15.2	11.5	0.14	12.6	11.5	2.4	1	1	0	1	1	1	0	AAA	domain
AAA	PF00004.29	gi|429217607|ref|YP_007175597.1|	-	0.039	14.4	1.4	0.64	10.4	1.4	2.5	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_30	PF13604.6	gi|429217607|ref|YP_007175597.1|	-	0.044	13.5	0.0	0.096	12.4	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_24	PF13479.6	gi|429217607|ref|YP_007175597.1|	-	0.051	13.3	0.1	0.32	10.7	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
AAA_33	PF13671.6	gi|429217607|ref|YP_007175597.1|	-	0.077	13.1	0.1	0.17	12.0	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_27	PF13514.6	gi|429217607|ref|YP_007175597.1|	-	0.097	12.2	0.0	0.18	11.4	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_19	PF13245.6	gi|429217607|ref|YP_007175597.1|	-	0.17	12.2	0.3	0.48	10.8	0.3	1.9	1	1	0	1	1	1	0	AAA	domain
FbpA	PF05833.11	gi|429217609|ref|YP_007175599.1|	-	5.3e-31	107.9	19.8	7.4e-31	107.4	19.8	1.3	1	0	0	1	1	1	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
NFACT-R_1	PF05670.13	gi|429217609|ref|YP_007175599.1|	-	4e-25	88.6	0.0	1.1e-24	87.2	0.0	1.8	1	0	0	1	1	1	1	NFACT	protein	RNA	binding	domain
DUF4795	PF16043.5	gi|429217609|ref|YP_007175599.1|	-	0.14	11.8	10.0	0.27	10.8	9.0	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4795)
KASH_CCD	PF14662.6	gi|429217609|ref|YP_007175599.1|	-	0.91	9.3	16.0	2.1	8.1	16.0	1.5	1	1	0	1	1	1	0	Coiled-coil	region	of	CCDC155	or	KASH
DUF1610	PF07754.11	gi|429217610|ref|YP_007175600.1|	-	8.4e-17	60.8	8.8	2.6e-14	52.8	3.7	2.3	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF1610)
DZR	PF12773.7	gi|429217610|ref|YP_007175600.1|	-	2.3e-05	24.3	20.6	0.00032	20.7	12.0	1.9	1	1	1	2	2	2	2	Double	zinc	ribbon
zf-C2HC5	PF06221.13	gi|429217610|ref|YP_007175600.1|	-	9.6e-05	22.3	10.4	0.00037	20.4	2.9	2.2	1	1	1	2	2	2	1	Putative	zinc	finger	motif,	C2HC5-type
zf-ribbon_3	PF13248.6	gi|429217610|ref|YP_007175600.1|	-	0.00054	19.3	15.6	0.1	12.0	0.2	4.0	4	0	0	4	4	4	2	zinc-ribbon	domain
DUF1272	PF06906.11	gi|429217610|ref|YP_007175600.1|	-	0.00099	19.2	9.3	0.34	11.0	9.3	2.6	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1272)
zinc_ribbon_2	PF13240.6	gi|429217610|ref|YP_007175600.1|	-	0.0016	18.1	21.7	0.0061	16.2	4.7	3.7	2	2	0	2	2	2	1	zinc-ribbon	domain
HypA	PF01155.19	gi|429217610|ref|YP_007175600.1|	-	0.0035	17.3	10.2	0.016	15.2	0.3	2.1	1	1	1	2	2	2	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zf-CHY	PF05495.12	gi|429217610|ref|YP_007175600.1|	-	0.0064	17.0	10.2	0.71	10.4	11.8	2.0	1	1	1	2	2	2	2	CHY	zinc	finger
Nudix_N_2	PF14803.6	gi|429217610|ref|YP_007175600.1|	-	0.0083	16.0	12.5	1.2	9.1	7.0	3.6	2	1	0	2	2	2	1	Nudix	N-terminal
OrfB_Zn_ribbon	PF07282.11	gi|429217610|ref|YP_007175600.1|	-	0.0088	15.9	11.4	0.027	14.4	0.8	2.4	1	1	1	2	2	2	1	Putative	transposase	DNA-binding	domain
NinF	PF05810.12	gi|429217610|ref|YP_007175600.1|	-	0.015	15.2	4.6	0.77	9.7	0.2	2.3	1	1	1	2	2	2	0	NinF	protein
zinc_ribbon_10	PF10058.9	gi|429217610|ref|YP_007175600.1|	-	0.019	14.7	17.7	0.57	9.9	0.5	3.8	1	1	2	3	3	3	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
DUF2072	PF09845.9	gi|429217610|ref|YP_007175600.1|	-	0.019	15.2	1.4	0.019	15.2	1.4	2.1	1	1	1	2	2	2	0	Zn-ribbon	containing	protein
DUF35_N	PF12172.8	gi|429217610|ref|YP_007175600.1|	-	0.019	14.8	13.9	0.028	14.3	1.1	3.8	1	1	2	3	3	3	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
C1_2	PF03107.16	gi|429217610|ref|YP_007175600.1|	-	0.022	15.1	10.8	0.07	13.5	3.5	2.1	1	1	1	2	2	2	0	C1	domain
zf-RING_7	PF02591.15	gi|429217610|ref|YP_007175600.1|	-	0.023	14.9	10.8	2.6	8.3	0.1	3.5	3	1	0	3	3	3	0	C4-type	zinc	ribbon	domain
DUF2321	PF10083.9	gi|429217610|ref|YP_007175600.1|	-	0.027	14.1	5.7	0.031	13.9	4.3	1.8	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2321)
PolC_DP2	PF03833.13	gi|429217610|ref|YP_007175600.1|	-	0.049	11.5	3.6	0.055	11.3	3.6	1.1	1	0	0	1	1	1	0	DNA	polymerase	II	large	subunit	DP2
zf-H2C2_2	PF13465.6	gi|429217610|ref|YP_007175600.1|	-	0.054	13.9	15.7	0.2	12.1	0.4	3.8	1	1	3	4	4	4	0	Zinc-finger	double	domain
Zn-ribbon_8	PF09723.10	gi|429217610|ref|YP_007175600.1|	-	0.07	13.3	1.3	0.07	13.3	1.3	3.3	1	1	0	2	2	2	0	Zinc	ribbon	domain
zf-MYND	PF01753.18	gi|429217610|ref|YP_007175600.1|	-	0.072	13.2	10.7	0.66	10.1	0.6	2.2	2	0	0	2	2	2	0	MYND	finger
ADK_lid	PF05191.14	gi|429217610|ref|YP_007175600.1|	-	0.086	12.8	1.7	0.086	12.8	1.7	2.9	2	1	0	2	2	2	0	Adenylate	kinase,	active	site	lid
Zn_ribbon_SprT	PF17283.2	gi|429217610|ref|YP_007175600.1|	-	0.11	12.5	16.7	3.6	7.6	0.2	3.6	2	1	0	2	2	2	0	SprT-like	zinc	ribbon	domain
zf-Mss51	PF13824.6	gi|429217610|ref|YP_007175600.1|	-	0.12	12.5	11.8	4.4	7.5	2.7	2.6	1	1	1	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
zf-ACC	PF17848.1	gi|429217610|ref|YP_007175600.1|	-	0.12	12.5	12.7	4.7	7.4	0.1	4.0	4	0	0	4	4	4	0	Acetyl-coA	carboxylase	zinc	finger	domain
zf-B_box	PF00643.24	gi|429217610|ref|YP_007175600.1|	-	0.13	12.5	11.9	0.81	9.9	1.7	2.7	1	1	1	2	2	2	0	B-box	zinc	finger
HscB_4_cys	PF18256.1	gi|429217610|ref|YP_007175600.1|	-	0.13	12.1	0.6	0.13	12.1	0.6	3.2	1	1	1	3	3	3	0	Co-chaperone	HscB	tetracysteine	metal	binding	motif
zinc-ribbons_6	PF07191.12	gi|429217610|ref|YP_007175600.1|	-	0.15	12.1	10.2	2.7	8.0	4.5	2.2	1	1	1	2	2	2	0	zinc-ribbons
zf-UDP	PF14569.6	gi|429217610|ref|YP_007175600.1|	-	0.17	12.0	5.4	0.21	11.7	5.4	1.1	1	0	0	1	1	1	0	Zinc-binding	RING-finger
NOB1_Zn_bind	PF08772.11	gi|429217610|ref|YP_007175600.1|	-	0.24	11.6	12.0	0.074	13.2	5.2	2.1	1	1	1	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
zf-RING_9	PF13901.6	gi|429217610|ref|YP_007175600.1|	-	0.29	11.1	6.4	0.36	10.8	6.4	1.1	1	0	0	1	1	1	0	Putative	zinc-RING	and/or	ribbon
tRNA-synt_1f	PF01921.18	gi|429217610|ref|YP_007175600.1|	-	0.37	9.7	2.2	0.88	8.4	2.2	1.6	1	1	0	1	1	1	0	tRNA	synthetases	class	I	(K)
DUF2752	PF10825.8	gi|429217610|ref|YP_007175600.1|	-	0.54	10.4	6.7	3.7	7.7	0.1	2.7	3	0	0	3	3	2	0	Protein	of	unknown	function	(DUF2752)
IBR	PF01485.21	gi|429217610|ref|YP_007175600.1|	-	0.55	10.5	11.5	8.9	6.6	11.5	2.2	1	1	0	1	1	1	0	IBR	domain,	a	half	RING-finger	domain
zinc_ribbon_4	PF13717.6	gi|429217610|ref|YP_007175600.1|	-	0.6	10.1	18.1	10	6.1	0.3	4.0	2	1	1	3	3	3	0	zinc-ribbon	domain
zf-LITAF-like	PF10601.9	gi|429217610|ref|YP_007175600.1|	-	0.92	9.8	15.0	0.52	10.6	1.6	3.6	1	1	3	4	4	4	0	LITAF-like	zinc	ribbon	domain
A2L_zn_ribbon	PF08792.10	gi|429217610|ref|YP_007175600.1|	-	1.5	8.7	16.0	4.7	7.1	5.3	3.9	3	1	0	3	3	3	0	A2L	zinc	ribbon	domain
zf_UBZ	PF18439.1	gi|429217610|ref|YP_007175600.1|	-	1.5	8.4	16.6	12	5.6	0.2	4.1	3	1	1	4	4	4	0	Ubiquitin-Binding	Zinc	Finger
Zn_Tnp_IS1595	PF12760.7	gi|429217610|ref|YP_007175600.1|	-	1.6	8.8	20.6	27	4.8	0.2	3.9	2	1	0	2	2	2	0	Transposase	zinc-ribbon	domain
Spt4	PF06093.13	gi|429217610|ref|YP_007175600.1|	-	1.6	8.8	9.1	5	7.3	3.4	2.2	1	1	1	2	2	2	0	Spt4/RpoE2	zinc	finger
TF_Zn_Ribbon	PF08271.12	gi|429217610|ref|YP_007175600.1|	-	1.6	8.3	18.5	3.2	7.3	1.5	3.6	3	1	0	3	3	3	0	TFIIB	zinc-binding
Auto_anti-p27	PF06677.12	gi|429217610|ref|YP_007175600.1|	-	1.7	8.9	12.4	0.25	11.6	1.3	2.7	2	1	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
PhnA_Zn_Ribbon	PF08274.12	gi|429217610|ref|YP_007175600.1|	-	2.3	8.2	9.1	30	4.7	0.2	3.7	4	0	0	4	4	4	0	PhnA	Zinc-Ribbon
Rubredoxin_2	PF18073.1	gi|429217610|ref|YP_007175600.1|	-	2.4	8.0	19.5	3.2	7.6	0.3	3.9	3	1	0	3	3	3	0	Rubredoxin	metal	binding	domain
NRDD	PF13597.6	gi|429217610|ref|YP_007175600.1|	-	3.3	6.4	13.6	1.6	7.4	4.5	2.0	1	1	1	2	2	2	0	Anaerobic	ribonucleoside-triphosphate	reductase
DUF3268	PF11672.8	gi|429217610|ref|YP_007175600.1|	-	3.9	7.8	8.0	2.4	8.5	2.8	2.0	1	1	1	2	2	2	0	zinc-finger-containing	domain
Sgf11	PF08209.11	gi|429217610|ref|YP_007175600.1|	-	4.9	6.8	17.1	0.67	9.6	0.3	3.8	3	1	1	4	4	4	0	Sgf11	(transcriptional	regulation	protein)
zf-C2H2	PF00096.26	gi|429217610|ref|YP_007175600.1|	-	5.5	7.6	15.5	6.5	7.4	0.2	4.0	4	0	0	4	4	4	0	Zinc	finger,	C2H2	type
Dynactin_p62	PF05502.13	gi|429217610|ref|YP_007175600.1|	-	6.2	5.5	8.9	1.4e+02	1.0	9.6	1.9	1	1	0	1	1	1	0	Dynactin	p62	family
Nop10p	PF04135.12	gi|429217610|ref|YP_007175600.1|	-	7.3	6.7	11.1	0.79	9.8	2.4	2.7	1	1	2	3	3	3	0	Nucleolar	RNA-binding	protein,	Nop10p	family
Ribosomal_L37ae	PF01780.19	gi|429217610|ref|YP_007175600.1|	-	7.5	6.7	12.4	8.1	6.6	0.4	3.0	1	1	2	3	3	3	0	Ribosomal	L37ae	protein	family
zf-C4_Topoisom	PF01396.19	gi|429217610|ref|YP_007175600.1|	-	7.9	6.4	15.9	2.6	7.9	2.6	3.4	1	1	3	4	4	4	0	Topoisomerase	DNA	binding	C4	zinc	finger
zf-AN1	PF01428.16	gi|429217610|ref|YP_007175600.1|	-	8.4	6.6	13.9	14	6.0	2.5	3.0	1	1	3	4	4	4	0	AN1-like	Zinc	finger
Zn_Tnp_IS91	PF14319.6	gi|429217610|ref|YP_007175600.1|	-	9.2	6.4	11.3	9.7	6.3	2.8	2.2	1	1	1	2	2	2	0	Transposase	zinc-binding	domain
zf-HIT	PF04438.16	gi|429217610|ref|YP_007175600.1|	-	9.9	6.1	20.4	4.9	7.1	8.6	3.3	1	1	1	2	2	1	0	HIT	zinc	finger
EF1_GNE	PF00736.19	gi|429217611|ref|YP_007175601.1|	-	8.2e-19	67.6	0.5	9.1e-19	67.4	0.5	1.0	1	0	0	1	1	1	1	EF-1	guanine	nucleotide	exchange	domain
P2	PF07194.11	gi|429217611|ref|YP_007175601.1|	-	0.022	14.8	0.6	0.034	14.2	0.5	1.4	1	1	0	1	1	1	0	P2	response	regulator	binding	domain
SNARE_assoc	PF09335.11	gi|429217612|ref|YP_007175602.1|	-	2.2e-09	37.8	5.4	2.2e-09	37.8	5.4	2.0	2	1	0	2	2	2	1	SNARE	associated	Golgi	protein
DUF2070	PF09843.9	gi|429217612|ref|YP_007175602.1|	-	0.91	7.7	21.3	1.1	7.5	21.3	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
Lactamase_B_2	PF12706.7	gi|429217613|ref|YP_007175603.1|	-	4.4e-14	52.5	0.0	3e-07	30.2	0.0	2.1	2	0	0	2	2	2	2	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|429217613|ref|YP_007175603.1|	-	8.5e-09	35.7	0.4	2e-08	34.5	0.1	1.7	2	0	0	2	2	2	1	Metallo-beta-lactamase	superfamily
Lactamase_B_4	PF13691.6	gi|429217613|ref|YP_007175603.1|	-	0.0059	16.3	0.0	0.013	15.2	0.0	1.6	1	0	0	1	1	1	1	tRNase	Z	endonuclease
Lactamase_B_3	PF13483.6	gi|429217613|ref|YP_007175603.1|	-	0.014	15.2	0.1	0.038	13.9	0.0	1.6	2	0	0	2	2	2	0	Beta-lactamase	superfamily	domain
DUF5397	PF17375.2	gi|429217613|ref|YP_007175603.1|	-	0.066	12.9	0.0	0.15	11.8	0.0	1.6	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5397)
DNA_ligase_A_M	PF01068.21	gi|429217614|ref|YP_007175604.1|	-	2.7e-61	206.8	0.4	4.6e-61	206.0	0.4	1.4	1	0	0	1	1	1	1	ATP	dependent	DNA	ligase	domain
DNA_ligase_A_N	PF04675.14	gi|429217614|ref|YP_007175604.1|	-	6.8e-39	133.9	0.0	1.3e-38	133.1	0.0	1.5	1	0	0	1	1	1	1	DNA	ligase	N	terminus
DNA_ligase_A_C	PF04679.15	gi|429217614|ref|YP_007175604.1|	-	5.9e-23	81.3	0.0	1.7e-22	79.8	0.0	1.8	2	0	0	2	2	2	1	ATP	dependent	DNA	ligase	C	terminal	region
Rpr2	PF04032.16	gi|429217615|ref|YP_007175605.1|	-	5.5e-16	58.6	0.5	8.6e-16	58.0	0.5	1.3	1	0	0	1	1	1	1	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
zf-RING_7	PF02591.15	gi|429217615|ref|YP_007175605.1|	-	0.028	14.6	0.2	0.052	13.7	0.2	1.5	1	0	0	1	1	1	0	C4-type	zinc	ribbon	domain
zinc_ribbon_6	PF14599.6	gi|429217615|ref|YP_007175605.1|	-	0.031	14.3	1.4	0.098	12.7	0.4	2.0	2	0	0	2	2	2	0	Zinc-ribbon
NMD3	PF04981.13	gi|429217615|ref|YP_007175605.1|	-	0.036	13.5	1.8	0.097	12.1	2.0	1.6	1	1	1	2	2	2	0	NMD3	family
zinc_ribbon_13	PF09855.9	gi|429217615|ref|YP_007175605.1|	-	0.07	13.3	1.6	0.12	12.6	0.1	2.0	2	0	0	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
DNA_RNApol_7kD	PF03604.13	gi|429217615|ref|YP_007175605.1|	-	0.19	11.5	3.9	0.53	10.0	0.5	2.5	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-C2H2_3	PF13878.6	gi|429217615|ref|YP_007175605.1|	-	0.2	11.5	1.7	12	5.8	0.4	2.3	1	1	1	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
UPF0020	PF01170.18	gi|429217616|ref|YP_007175606.1|	-	6.6e-28	97.7	0.0	4.6e-27	95.0	0.0	2.0	1	1	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Cons_hypoth95	PF03602.15	gi|429217616|ref|YP_007175606.1|	-	2.9e-10	40.1	0.0	4.5e-10	39.5	0.0	1.2	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
N6_N4_Mtase	PF01555.18	gi|429217616|ref|YP_007175606.1|	-	0.00016	21.5	0.0	0.009	15.7	0.0	2.2	2	0	0	2	2	2	1	DNA	methylase
MTS	PF05175.14	gi|429217616|ref|YP_007175606.1|	-	0.00034	20.2	0.0	0.0011	18.6	0.0	1.7	1	1	1	2	2	2	1	Methyltransferase	small	domain
MethyltransfD12	PF02086.15	gi|429217616|ref|YP_007175606.1|	-	0.0012	18.6	0.2	0.099	12.3	0.0	2.7	2	1	1	3	3	3	1	D12	class	N6	adenine-specific	DNA	methyltransferase
Methyltransf_11	PF08241.12	gi|429217616|ref|YP_007175606.1|	-	0.013	16.1	0.1	0.15	12.7	0.1	2.3	1	1	0	1	1	1	0	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|429217616|ref|YP_007175606.1|	-	0.019	15.6	0.0	0.043	14.5	0.0	1.6	1	1	0	1	1	1	0	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|429217616|ref|YP_007175606.1|	-	0.024	14.4	0.0	0.081	12.7	0.0	2.0	1	1	0	1	1	1	0	Methyltransferase	domain
PrmA	PF06325.13	gi|429217616|ref|YP_007175606.1|	-	0.025	14.0	0.0	0.048	13.0	0.0	1.5	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
N6_Mtase	PF02384.16	gi|429217616|ref|YP_007175606.1|	-	0.045	13.0	0.0	0.098	11.9	0.0	1.6	1	1	0	1	1	1	0	N-6	DNA	Methylase
DUF302	PF03625.14	gi|429217617|ref|YP_007175607.1|	-	7.2e-13	48.2	0.0	1.1e-12	47.7	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF302
Castor_Poll_mid	PF06241.12	gi|429217617|ref|YP_007175607.1|	-	0.08	12.9	0.1	0.12	12.4	0.1	1.4	1	0	0	1	1	1	0	Castor	and	Pollux,	part	of	voltage-gated	ion	channel
His_Phos_1	PF00300.22	gi|429217618|ref|YP_007175608.1|	-	1.3e-46	158.7	0.0	1.5e-46	158.5	0.0	1.0	1	0	0	1	1	1	1	Histidine	phosphatase	superfamily	(branch	1)
RNA_binding	PF01877.17	gi|429217619|ref|YP_007175609.1|	-	2e-21	76.5	0.2	2.5e-21	76.2	0.2	1.1	1	0	0	1	1	1	1	RNA	binding
ALS_ss_C	PF10369.9	gi|429217619|ref|YP_007175609.1|	-	0.11	12.7	0.2	0.29	11.4	0.1	1.6	2	0	0	2	2	2	0	Small	subunit	of	acetolactate	synthase
AAA_17	PF13207.6	gi|429217620|ref|YP_007175610.1|	-	2.3e-19	70.1	0.0	3.6e-19	69.5	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.6	gi|429217620|ref|YP_007175610.1|	-	1e-16	61.7	0.2	1.3e-16	61.4	0.2	1.2	1	0	0	1	1	1	1	AAA	domain
Cytidylate_kin	PF02224.18	gi|429217620|ref|YP_007175610.1|	-	1e-05	25.4	0.4	0.00084	19.1	0.1	2.2	1	1	1	2	2	2	1	Cytidylate	kinase
ADK	PF00406.22	gi|429217620|ref|YP_007175610.1|	-	1.4e-05	25.2	0.0	2e-05	24.8	0.0	1.3	1	0	0	1	1	1	1	Adenylate	kinase
Cytidylate_kin2	PF13189.6	gi|429217620|ref|YP_007175610.1|	-	1.9e-05	24.9	0.1	3.1e-05	24.2	0.1	1.4	1	1	0	1	1	1	1	Cytidylate	kinase-like	family
AAA_33	PF13671.6	gi|429217620|ref|YP_007175610.1|	-	0.00023	21.3	0.0	0.00054	20.1	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
6PF2K	PF01591.18	gi|429217620|ref|YP_007175610.1|	-	0.00023	20.5	0.1	0.00039	19.8	0.1	1.4	1	0	0	1	1	1	1	6-phosphofructo-2-kinase
APS_kinase	PF01583.20	gi|429217620|ref|YP_007175610.1|	-	0.00042	20.2	0.1	0.034	14.0	0.0	2.3	2	0	0	2	2	2	1	Adenylylsulphate	kinase
AAA_22	PF13401.6	gi|429217620|ref|YP_007175610.1|	-	0.00086	19.6	0.0	0.0014	18.9	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
P-mevalo_kinase	PF04275.14	gi|429217620|ref|YP_007175610.1|	-	0.0012	18.7	0.2	0.21	11.5	0.2	2.5	1	1	0	1	1	1	1	Phosphomevalonate	kinase
Torsin	PF06309.11	gi|429217620|ref|YP_007175610.1|	-	0.0014	18.7	0.1	0.0044	17.1	0.0	1.8	1	1	1	2	2	2	1	Torsin
AAA_14	PF13173.6	gi|429217620|ref|YP_007175610.1|	-	0.0019	18.2	0.7	0.0045	17.0	0.2	1.8	2	1	0	2	2	2	1	AAA	domain
AAA_24	PF13479.6	gi|429217620|ref|YP_007175610.1|	-	0.0021	17.8	0.0	0.0036	17.0	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
dNK	PF01712.19	gi|429217620|ref|YP_007175610.1|	-	0.0028	17.5	1.3	0.018	14.9	1.3	2.2	1	1	0	1	1	1	1	Deoxynucleoside	kinase
NTPase_1	PF03266.15	gi|429217620|ref|YP_007175610.1|	-	0.0044	17.0	0.5	0.013	15.4	0.5	1.9	1	1	0	1	1	1	1	NTPase
KTI12	PF08433.10	gi|429217620|ref|YP_007175610.1|	-	0.0057	16.1	0.3	0.03	13.8	0.3	2.1	1	1	0	1	1	1	1	Chromatin	associated	protein	KTI12
KAP_NTPase	PF07693.14	gi|429217620|ref|YP_007175610.1|	-	0.01	15.1	0.1	0.011	15.1	0.1	1.2	1	0	0	1	1	1	0	KAP	family	P-loop	domain
Viral_helicase1	PF01443.18	gi|429217620|ref|YP_007175610.1|	-	0.014	15.2	0.0	0.02	14.6	0.0	1.4	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
Sigma54_activ_2	PF14532.6	gi|429217620|ref|YP_007175610.1|	-	0.015	15.4	0.1	0.037	14.2	0.1	1.8	1	1	0	1	1	1	0	Sigma-54	interaction	domain
SKI	PF01202.22	gi|429217620|ref|YP_007175610.1|	-	0.022	14.9	0.2	0.045	13.9	0.2	1.9	1	1	0	1	1	1	0	Shikimate	kinase
CoaE	PF01121.20	gi|429217620|ref|YP_007175610.1|	-	0.022	14.4	0.1	0.18	11.5	0.0	2.0	1	1	1	2	2	2	0	Dephospho-CoA	kinase
DUF87	PF01935.17	gi|429217620|ref|YP_007175610.1|	-	0.025	14.7	1.9	0.18	11.9	0.2	2.3	1	1	0	2	2	2	0	Helicase	HerA,	central	domain
AAA	PF00004.29	gi|429217620|ref|YP_007175610.1|	-	0.026	14.9	0.7	0.062	13.7	0.2	1.9	2	1	0	2	2	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_28	PF13521.6	gi|429217620|ref|YP_007175610.1|	-	0.031	14.5	0.0	0.048	13.9	0.0	1.4	1	1	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.12	gi|429217620|ref|YP_007175610.1|	-	0.032	13.5	0.1	0.059	12.7	0.1	1.6	1	1	0	1	1	1	0	Zeta	toxin
MeaB	PF03308.16	gi|429217620|ref|YP_007175610.1|	-	0.037	13.0	1.5	0.47	9.4	0.1	2.7	2	1	1	3	3	3	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
DUF5507	PF17612.2	gi|429217620|ref|YP_007175610.1|	-	0.078	12.7	3.7	0.066	12.9	0.6	2.0	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5507)
SRP54	PF00448.22	gi|429217620|ref|YP_007175610.1|	-	0.094	12.3	0.0	0.13	11.8	0.0	1.2	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
ABC_tran	PF00005.27	gi|429217620|ref|YP_007175610.1|	-	0.095	13.2	0.5	0.11	13.1	0.5	1.4	1	1	0	1	1	1	0	ABC	transporter
cobW	PF02492.19	gi|429217620|ref|YP_007175610.1|	-	0.12	12.0	0.4	12	5.4	0.0	2.3	2	1	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
Phage_TTP_1	PF04630.12	gi|429217620|ref|YP_007175610.1|	-	0.13	11.6	0.0	0.2	10.9	0.0	1.3	1	0	0	1	1	1	0	Phage	tail	tube	protein
AAA_30	PF13604.6	gi|429217620|ref|YP_007175610.1|	-	0.18	11.5	0.0	0.34	10.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.17	gi|429217620|ref|YP_007175610.1|	-	0.28	10.9	0.9	2.4	7.9	0.2	2.3	2	1	0	2	2	1	0	IstB-like	ATP	binding	protein
Adenosine_kin	PF04008.14	gi|429217621|ref|YP_007175611.1|	-	8.6e-68	227.0	0.0	9.8e-68	226.8	0.0	1.0	1	0	0	1	1	1	1	Adenosine	specific	kinase
SPA	PF08616.10	gi|429217621|ref|YP_007175611.1|	-	0.0093	15.9	0.1	0.015	15.3	0.1	1.2	1	0	0	1	1	1	1	Stabilization	of	polarity	axis
CTP_transf_like	PF01467.26	gi|429217622|ref|YP_007175612.1|	-	2.4e-11	44.0	0.0	9.3e-11	42.1	0.0	2.0	2	1	0	2	2	2	1	Cytidylyltransferase-like
HIGH_NTase1	PF05636.11	gi|429217622|ref|YP_007175612.1|	-	0.00044	19.6	0.0	0.18	11.0	0.0	2.2	2	0	0	2	2	2	2	HIGH	Nucleotidyl	Transferase
Methyltr_RsmB-F	PF01189.17	gi|429217623|ref|YP_007175613.1|	-	2.4e-48	164.5	0.0	3.1e-48	164.1	0.0	1.1	1	0	0	1	1	1	1	16S	rRNA	methyltransferase	RsmB/F
Methyltr_RsmF_N	PF17125.5	gi|429217623|ref|YP_007175613.1|	-	1.1e-13	51.5	0.0	7.2e-13	48.8	0.0	2.1	2	0	0	2	2	2	1	N-terminal	domain	of	16S	rRNA	methyltransferase	RsmF
Methyltransf_31	PF13847.6	gi|429217623|ref|YP_007175613.1|	-	5.8e-05	22.9	0.0	0.00012	22.0	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|429217623|ref|YP_007175613.1|	-	0.044	13.3	0.0	0.17	11.5	0.0	1.8	2	0	0	2	2	2	0	Methyltransferase	small	domain
FtsJ	PF01728.19	gi|429217623|ref|YP_007175613.1|	-	0.05	13.7	0.0	0.096	12.8	0.0	1.5	1	0	0	1	1	1	0	FtsJ-like	methyltransferase
Methyltransf_5	PF01795.19	gi|429217623|ref|YP_007175613.1|	-	0.077	12.5	0.0	0.19	11.2	0.0	1.6	1	0	0	1	1	1	0	MraW	methylase	family
UPF0113	PF03657.13	gi|429217624|ref|YP_007175614.1|	-	3.9e-16	59.1	0.3	7.6e-16	58.1	0.2	1.6	2	0	0	2	2	2	1	UPF0113	PUA	domain
UPF0113_N	PF17833.1	gi|429217624|ref|YP_007175614.1|	-	0.00057	20.4	1.1	0.00092	19.7	0.3	1.7	2	0	0	2	2	2	1	UPF0113	Pre-PUA	domain
RsmF_methylt_CI	PF17126.5	gi|429217624|ref|YP_007175614.1|	-	0.098	12.7	0.0	0.49	10.5	0.0	2.2	2	0	0	2	2	2	0	RsmF	rRNA	methyltransferase	first	C-terminal	domain
FKBP_C	PF00254.28	gi|429217625|ref|YP_007175615.1|	-	2.7e-09	37.2	0.1	5.6e-09	36.2	0.1	1.7	1	0	0	1	1	1	1	FKBP-type	peptidyl-prolyl	cis-trans	isomerase
FKBP26_C	PF18046.1	gi|429217625|ref|YP_007175615.1|	-	0.001	19.1	0.1	0.0044	17.1	0.0	2.1	1	1	1	2	2	2	1	FKBP26_C-terminal
RasGAP	PF00616.19	gi|429217625|ref|YP_007175615.1|	-	0.035	13.8	6.6	0.35	10.5	3.2	2.2	2	0	0	2	2	2	0	GTPase-activator	protein	for	Ras-like	GTPase
SAPIS-gp6	PF16722.5	gi|429217625|ref|YP_007175615.1|	-	0.08	13.4	5.7	3	8.3	3.9	2.5	2	0	0	2	2	2	0	Pathogenicity	island	protein	gp6	in	Staphylococcus
PhnA	PF03831.14	gi|429217625|ref|YP_007175615.1|	-	0.12	12.2	0.3	18	5.3	0.0	3.0	3	0	0	3	3	3	0	PhnA	domain
DNA_pol3_a_NII	PF11490.8	gi|429217625|ref|YP_007175615.1|	-	0.33	10.8	12.1	0.097	12.6	5.0	2.5	2	0	0	2	2	2	0	DNA	polymerase	III	polC-type	N-terminus	II
Metallophos	PF00149.28	gi|429217626|ref|YP_007175616.1|	-	2.7e-10	41.1	0.3	3.5e-10	40.7	0.3	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|429217626|ref|YP_007175616.1|	-	0.00021	21.5	0.0	0.0011	19.2	0.0	1.8	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
CppA_N	PF14506.6	gi|429217626|ref|YP_007175616.1|	-	0.00094	19.3	0.1	0.049	13.7	0.1	2.2	2	0	0	2	2	2	1	CppA	N-terminal
Metallophos_3	PF14582.6	gi|429217626|ref|YP_007175616.1|	-	0.0096	15.3	0.0	0.48	9.7	0.0	2.3	1	1	1	2	2	2	2	Metallophosphoesterase,	calcineurin	superfamily
MGDG_synth	PF06925.11	gi|429217626|ref|YP_007175616.1|	-	0.072	13.2	0.1	0.16	12.0	0.1	1.7	1	1	0	1	1	1	0	Monogalactosyldiacylglycerol	(MGDG)	synthase
CdiA_C_tRNase	PF18664.1	gi|429217626|ref|YP_007175616.1|	-	0.17	12.1	0.4	1.7	8.8	0.1	2.1	2	0	0	2	2	2	0	CdiA	C-terminal	tRNase	domain
UPF0047	PF01894.17	gi|429217627|ref|YP_007175617.1|	-	1.6e-35	121.7	0.0	1.9e-35	121.5	0.0	1.1	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0047
Helicase_C_2	PF13307.6	gi|429217628|ref|YP_007175618.1|	-	5.2e-25	88.6	0.0	1e-24	87.6	0.0	1.5	1	0	0	1	1	1	1	Helicase	C-terminal	domain
DEAD_2	PF06733.15	gi|429217628|ref|YP_007175618.1|	-	2.2e-14	53.5	0.6	6.2e-14	52.0	0.3	1.9	1	1	1	2	2	2	1	DEAD_2
ResIII	PF04851.15	gi|429217628|ref|YP_007175618.1|	-	4.4e-08	33.3	0.4	1.2e-05	25.4	0.1	3.1	2	1	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
DEAD	PF00270.29	gi|429217628|ref|YP_007175618.1|	-	2.9e-05	23.9	0.7	0.025	14.3	0.5	3.3	2	1	0	2	2	2	1	DEAD/DEAH	box	helicase
AAA_22	PF13401.6	gi|429217628|ref|YP_007175618.1|	-	0.035	14.4	0.1	1.4	9.1	0.0	2.5	2	0	0	2	2	2	0	AAA	domain
WSN	PF02206.18	gi|429217628|ref|YP_007175618.1|	-	0.047	13.6	1.2	0.35	10.8	0.0	2.9	3	0	0	3	3	3	0	Domain	of	unknown	function
v110	PF01639.17	gi|429217628|ref|YP_007175618.1|	-	0.075	12.9	0.3	0.16	11.9	0.3	1.5	1	0	0	1	1	1	0	Viral	family	110
SNF2_N	PF00176.23	gi|429217628|ref|YP_007175618.1|	-	0.15	10.7	0.0	0.27	9.9	0.0	1.3	1	0	0	1	1	1	0	SNF2	family	N-terminal	domain
RuvA_C	PF07499.13	gi|429217628|ref|YP_007175618.1|	-	0.22	12.0	0.5	3.6	8.1	0.1	3.1	3	0	0	3	3	3	0	RuvA,	C-terminal	domain
Metallophos_2	PF12850.7	gi|429217629|ref|YP_007175619.1|	-	8.3e-13	48.9	0.0	1.4e-12	48.1	0.0	1.3	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos_3	PF14582.6	gi|429217629|ref|YP_007175619.1|	-	3.5e-10	39.6	0.1	1.1e-07	31.5	0.0	2.1	2	0	0	2	2	2	2	Metallophosphoesterase,	calcineurin	superfamily
Metallophos	PF00149.28	gi|429217629|ref|YP_007175619.1|	-	6.6e-06	26.8	1.2	8.1e-05	23.2	1.2	2.0	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
DnaB	PF00772.21	gi|429217629|ref|YP_007175619.1|	-	0.098	12.7	0.1	1.5	8.9	0.0	2.1	2	0	0	2	2	2	0	DnaB-like	helicase	N	terminal	domain
DUF763	PF05559.11	gi|429217630|ref|YP_007175620.1|	-	1.6e-105	352.7	0.0	1.9e-105	352.5	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF763)
Pox_polyA_pol_N	PF12630.7	gi|429217630|ref|YP_007175620.1|	-	0.0088	16.4	0.2	0.022	15.1	0.2	1.6	1	0	0	1	1	1	1	Poxvirus	poly(A)	polymerase	N-terminal	domain
DUF4010	PF13194.6	gi|429217631|ref|YP_007175621.1|	-	2.5e-28	99.2	22.2	2.5e-28	99.2	22.2	2.5	2	1	0	2	2	2	1	Domain	of	unknown	function	(DUF4010)
MgtC	PF02308.16	gi|429217631|ref|YP_007175621.1|	-	2.5e-12	47.2	11.1	2.5e-12	47.2	11.1	4.1	2	1	2	4	4	4	1	MgtC	family
ABC2_membrane	PF01061.24	gi|429217632|ref|YP_007175622.1|	-	7.7e-11	41.8	29.0	1.5e-10	40.9	29.0	1.5	1	0	0	1	1	1	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.7	gi|429217632|ref|YP_007175622.1|	-	2.4e-05	23.6	36.6	2.4e-05	23.6	36.6	1.3	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
Romo1	PF10247.9	gi|429217632|ref|YP_007175622.1|	-	0.096	13.1	0.7	0.096	13.1	0.7	2.6	2	1	0	2	2	2	0	Reactive	mitochondrial	oxygen	species	modulator	1
ABC_tran	PF00005.27	gi|429217633|ref|YP_007175623.1|	-	1.2e-26	93.8	0.0	2.5e-26	92.8	0.0	1.5	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.6	gi|429217633|ref|YP_007175623.1|	-	9.9e-15	55.1	2.8	4.4e-08	33.3	0.1	2.2	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_15	PF13175.6	gi|429217633|ref|YP_007175623.1|	-	2.3e-05	24.3	0.3	0.0025	17.6	0.3	2.8	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_29	PF13555.6	gi|429217633|ref|YP_007175623.1|	-	3.2e-05	23.6	0.1	6.6e-05	22.6	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.6	gi|429217633|ref|YP_007175623.1|	-	0.0013	19.3	1.0	0.0025	18.3	1.0	1.7	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.19	gi|429217633|ref|YP_007175623.1|	-	0.0025	17.3	0.2	0.19	11.1	0.1	2.2	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
AAA_24	PF13479.6	gi|429217633|ref|YP_007175623.1|	-	0.0076	16.0	0.8	0.029	14.1	0.2	2.0	2	0	0	2	2	2	1	AAA	domain
RsgA_GTPase	PF03193.16	gi|429217633|ref|YP_007175623.1|	-	0.015	15.2	0.0	0.029	14.3	0.0	1.5	1	0	0	1	1	1	0	RsgA	GTPase
AAA_25	PF13481.6	gi|429217633|ref|YP_007175623.1|	-	0.023	14.3	0.0	0.045	13.3	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Rad17	PF03215.15	gi|429217633|ref|YP_007175623.1|	-	0.05	13.5	0.0	0.09	12.7	0.0	1.5	1	0	0	1	1	1	0	Rad17	P-loop	domain
AAA	PF00004.29	gi|429217633|ref|YP_007175623.1|	-	0.052	14.0	0.4	0.22	11.9	0.1	2.2	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_18	PF13238.6	gi|429217633|ref|YP_007175623.1|	-	0.077	13.6	0.1	0.2	12.2	0.1	1.6	1	0	0	1	1	1	0	AAA	domain
TsaE	PF02367.17	gi|429217633|ref|YP_007175623.1|	-	0.088	12.8	0.0	0.15	12.1	0.0	1.3	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_30	PF13604.6	gi|429217633|ref|YP_007175623.1|	-	0.089	12.5	0.2	0.16	11.7	0.2	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_28	PF13521.6	gi|429217633|ref|YP_007175623.1|	-	0.11	12.8	0.1	0.18	12.0	0.1	1.3	1	0	0	1	1	1	0	AAA	domain
SRP54	PF00448.22	gi|429217633|ref|YP_007175623.1|	-	0.11	12.1	0.2	0.26	10.9	0.2	1.6	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
Mg_chelatase	PF01078.21	gi|429217633|ref|YP_007175623.1|	-	0.14	11.5	0.0	0.29	10.5	0.0	1.5	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
MMR_HSR1	PF01926.23	gi|429217633|ref|YP_007175623.1|	-	0.21	11.7	1.5	1.6	8.9	1.5	2.3	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
Ish1	PF10281.9	gi|429217634|ref|YP_007175624.1|	-	0.11	12.8	0.2	20	5.6	0.1	2.5	2	0	0	2	2	2	0	Putative	stress-responsive	nuclear	envelope	protein
B12-binding	PF02310.19	gi|429217634|ref|YP_007175624.1|	-	0.13	12.3	0.0	0.22	11.6	0.0	1.4	1	0	0	1	1	1	0	B12	binding	domain
Ribosomal_L40e	PF01020.17	gi|429217635|ref|YP_007175625.1|	-	4.8e-08	32.8	2.7	6e-08	32.5	2.7	1.1	1	0	0	1	1	1	1	Ribosomal	L40e	family
zinc_ribbon_2	PF13240.6	gi|429217635|ref|YP_007175625.1|	-	9.1e-06	25.2	2.0	1.3e-05	24.8	2.0	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|429217635|ref|YP_007175625.1|	-	0.0028	17.6	1.2	0.0035	17.3	1.2	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-RanBP	PF00641.18	gi|429217635|ref|YP_007175625.1|	-	0.0035	16.6	1.6	0.0044	16.3	1.6	1.2	1	0	0	1	1	1	1	Zn-finger	in	Ran	binding	protein	and	others
UPF0547	PF10571.9	gi|429217635|ref|YP_007175625.1|	-	0.031	14.4	0.9	0.051	13.7	0.9	1.4	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
zf-TFIIB	PF13453.6	gi|429217635|ref|YP_007175625.1|	-	0.033	13.5	0.2	3.3	7.1	0.0	2.2	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
HypA	PF01155.19	gi|429217635|ref|YP_007175625.1|	-	0.033	14.2	0.4	0.036	14.1	0.4	1.1	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zf-FPG_IleRS	PF06827.14	gi|429217635|ref|YP_007175625.1|	-	0.083	12.8	7.2	0.15	11.9	1.3	2.2	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
zf-CCHC_2	PF13696.6	gi|429217635|ref|YP_007175625.1|	-	5.2	7.0	8.0	2.8	7.8	1.0	2.2	2	0	0	2	2	2	0	Zinc	knuckle
DUF1464	PF07318.12	gi|429217636|ref|YP_007175626.1|	-	5.1e-92	308.5	0.7	6.4e-92	308.2	0.7	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1464)
ROK	PF00480.20	gi|429217636|ref|YP_007175626.1|	-	0.0099	15.4	0.0	0.017	14.6	0.0	1.4	1	0	0	1	1	1	1	ROK	family
Imm9	PF15587.6	gi|429217636|ref|YP_007175626.1|	-	0.028	14.1	0.3	0.071	12.8	0.1	1.7	2	0	0	2	2	2	0	Immunity	protein	9
Picorna_P3A	PF06363.11	gi|429217637|ref|YP_007175627.1|	-	0.04	13.8	0.0	0.063	13.1	0.0	1.3	1	0	0	1	1	1	0	Picornaviridae	P3A	protein
Translin	PF01997.16	gi|429217638|ref|YP_007175628.1|	-	4.4e-13	49.7	0.0	1.6e-11	44.6	0.0	2.2	1	1	0	1	1	1	1	Translin	family
DegS	PF05384.11	gi|429217638|ref|YP_007175628.1|	-	0.0017	17.9	0.2	0.004	16.7	0.2	1.7	1	0	0	1	1	1	1	Sensor	protein	DegS
GHMP_kinases_C	PF08544.13	gi|429217639|ref|YP_007175629.1|	-	4.7e-08	33.3	0.0	9e-08	32.4	0.0	1.5	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
GHMP_kinases_N	PF00288.26	gi|429217639|ref|YP_007175629.1|	-	0.011	16.0	0.0	0.018	15.3	0.0	1.4	1	0	0	1	1	1	0	GHMP	kinases	N	terminal	domain
Vac_Fusion	PF02346.16	gi|429217639|ref|YP_007175629.1|	-	0.03	14.0	0.0	0.083	12.5	0.0	1.8	1	0	0	1	1	1	0	Chordopoxvirus	multifunctional	envelope	protein	A27
Ribosomal_S26e	PF01283.19	gi|429217640|ref|YP_007175630.1|	-	2.5e-24	85.8	0.7	2.7e-24	85.7	0.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S26e
zf-RING_7	PF02591.15	gi|429217640|ref|YP_007175630.1|	-	0.00062	19.9	0.3	0.0037	17.4	0.2	2.1	2	0	0	2	2	2	1	C4-type	zinc	ribbon	domain
Tat	PF00539.18	gi|429217640|ref|YP_007175630.1|	-	0.0039	17.3	0.1	0.0039	17.3	0.1	2.0	2	1	0	2	2	2	1	Transactivating	regulatory	protein	(Tat)
zf-C2HC_2	PF13913.6	gi|429217640|ref|YP_007175630.1|	-	0.036	14.0	0.3	0.13	12.2	0.1	2.1	2	0	0	2	2	2	0	zinc-finger	of	a	C2HC-type
Ribosomal_L18A	PF01775.17	gi|429217641|ref|YP_007175631.1|	-	7.6e-12	45.4	0.8	1.4e-11	44.5	0.8	1.5	1	1	0	1	1	1	1	Ribosomal	proteins	50S-L18Ae/60S-L20/60S-L18A
BCAS3	PF12490.8	gi|429217641|ref|YP_007175631.1|	-	0.049	13.2	0.2	0.054	13.0	0.2	1.1	1	0	0	1	1	1	0	Breast	carcinoma	amplified	sequence	3
Prefoldin	PF02996.17	gi|429217642|ref|YP_007175632.1|	-	1.9e-12	47.1	2.6	2.9e-12	46.6	2.6	1.3	1	0	0	1	1	1	1	Prefoldin	subunit
ATP-synt_B	PF00430.18	gi|429217642|ref|YP_007175632.1|	-	0.0032	17.6	2.0	0.0062	16.6	2.0	1.4	1	0	0	1	1	1	1	ATP	synthase	B/B'	CF(0)
vATP-synt_E	PF01991.18	gi|429217642|ref|YP_007175632.1|	-	0.012	15.0	3.4	0.021	14.2	3.4	1.3	1	0	0	1	1	1	0	ATP	synthase	(E/31	kDa)	subunit
APG6_N	PF17675.1	gi|429217642|ref|YP_007175632.1|	-	0.017	15.6	5.6	0.054	14.0	5.6	1.8	1	1	0	1	1	1	0	Apg6	coiled-coil	region
DUF4416	PF14385.6	gi|429217642|ref|YP_007175632.1|	-	0.022	14.7	0.0	0.042	13.8	0.0	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4416)
TRPM_tetra	PF16519.5	gi|429217642|ref|YP_007175632.1|	-	0.059	13.5	1.9	0.14	12.3	1.9	1.6	1	0	0	1	1	1	0	Tetramerisation	domain	of	TRPM
Sec34	PF04136.15	gi|429217642|ref|YP_007175632.1|	-	0.07	13.0	7.3	0.15	12.0	3.4	2.1	2	0	0	2	2	2	0	Sec34-like	family
TMF_DNA_bd	PF12329.8	gi|429217642|ref|YP_007175632.1|	-	0.083	12.9	8.0	0.058	13.4	5.9	1.8	2	0	0	2	2	2	0	TATA	element	modulatory	factor	1	DNA	binding
HemX	PF04375.14	gi|429217642|ref|YP_007175632.1|	-	0.23	10.7	9.5	3.2	7.0	0.1	2.0	2	0	0	2	2	2	0	HemX,	putative	uroporphyrinogen-III	C-methyltransferase
TPR_MLP1_2	PF07926.12	gi|429217642|ref|YP_007175632.1|	-	0.41	10.7	12.9	6.7	6.8	9.2	2.1	2	0	0	2	2	2	0	TPR/MLP1/MLP2-like	protein
BLOC1_2	PF10046.9	gi|429217642|ref|YP_007175632.1|	-	0.45	10.8	9.1	4.6	7.6	4.0	2.2	2	0	0	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Viral_P18	PF04521.13	gi|429217642|ref|YP_007175632.1|	-	0.87	9.4	3.3	0.34	10.7	0.9	1.7	2	1	0	2	2	2	0	ssRNA	positive	strand	viral	18kD	cysteine	rich	protein
Laminin_II	PF06009.12	gi|429217642|ref|YP_007175632.1|	-	0.9	9.6	8.5	0.79	9.7	3.2	2.1	2	0	0	2	2	2	0	Laminin	Domain	II
YlbD_coat	PF14071.6	gi|429217642|ref|YP_007175632.1|	-	1.3	9.3	8.9	2.1	8.6	3.6	2.1	2	0	0	2	2	2	0	Putative	coat	protein
AAA_23	PF13476.6	gi|429217642|ref|YP_007175632.1|	-	1.3	9.5	9.5	2.2	8.7	9.5	1.4	1	1	0	1	1	1	0	AAA	domain
Syntaxin_2	PF14523.6	gi|429217642|ref|YP_007175632.1|	-	2.3	8.7	12.3	5.9	7.3	6.2	2.2	2	0	0	2	2	2	0	Syntaxin-like	protein
Fib_alpha	PF08702.10	gi|429217642|ref|YP_007175632.1|	-	2.3	8.4	9.1	0.96	9.6	4.4	2.0	2	0	0	2	2	2	0	Fibrinogen	alpha/beta	chain	family
FlaC_arch	PF05377.11	gi|429217642|ref|YP_007175632.1|	-	5.9	7.4	8.7	29	5.1	0.2	2.4	2	0	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
LPP	PF04728.13	gi|429217642|ref|YP_007175632.1|	-	6.7	7.2	9.4	22	5.5	0.1	2.5	2	0	0	2	2	2	0	Lipoprotein	leucine-zipper
SRP54	PF00448.22	gi|429217643|ref|YP_007175633.1|	-	4.1e-71	238.7	0.5	6.4e-71	238.1	0.5	1.3	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SRP54_N	PF02881.19	gi|429217643|ref|YP_007175633.1|	-	7.1e-13	48.6	7.0	7.1e-13	48.6	7.0	2.1	2	0	0	2	2	1	1	SRP54-type	protein,	helical	bundle	domain
AAA_30	PF13604.6	gi|429217643|ref|YP_007175633.1|	-	0.00054	19.7	0.0	0.00096	18.9	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
MeaB	PF03308.16	gi|429217643|ref|YP_007175633.1|	-	0.001	18.1	0.0	0.017	14.1	0.0	2.2	1	1	0	1	1	1	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
MMR_HSR1	PF01926.23	gi|429217643|ref|YP_007175633.1|	-	0.002	18.2	0.1	0.0061	16.6	0.1	1.9	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
Zeta_toxin	PF06414.12	gi|429217643|ref|YP_007175633.1|	-	0.0037	16.6	0.0	0.01	15.1	0.0	1.7	1	0	0	1	1	1	1	Zeta	toxin
AAA_24	PF13479.6	gi|429217643|ref|YP_007175633.1|	-	0.0044	16.8	0.7	0.027	14.2	0.7	2.2	1	1	0	1	1	1	1	AAA	domain
cobW	PF02492.19	gi|429217643|ref|YP_007175633.1|	-	0.0056	16.3	3.8	0.0056	16.3	3.8	2.4	2	1	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_16	PF13191.6	gi|429217643|ref|YP_007175633.1|	-	0.007	16.8	0.0	0.015	15.7	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
CbiA	PF01656.23	gi|429217643|ref|YP_007175633.1|	-	0.013	15.5	0.3	0.045	13.8	0.0	2.1	2	1	0	2	2	2	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Thymidylate_kin	PF02223.17	gi|429217643|ref|YP_007175633.1|	-	0.014	15.1	0.2	0.065	12.9	0.0	2.2	3	0	0	3	3	3	0	Thymidylate	kinase
ATPase_2	PF01637.18	gi|429217643|ref|YP_007175633.1|	-	0.023	14.6	0.1	0.023	14.6	0.1	2.3	1	1	1	2	2	2	0	ATPase	domain	predominantly	from	Archaea
NTPase_1	PF03266.15	gi|429217643|ref|YP_007175633.1|	-	0.027	14.4	2.4	0.055	13.4	0.5	2.4	2	1	0	2	2	2	0	NTPase
RsgA_GTPase	PF03193.16	gi|429217643|ref|YP_007175633.1|	-	0.027	14.4	1.6	0.28	11.1	0.1	2.5	1	1	1	2	2	2	0	RsgA	GTPase
DUF1788	PF08747.11	gi|429217643|ref|YP_007175633.1|	-	0.034	14.1	2.2	0.038	14.0	0.3	2.0	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF1788)
KTI12	PF08433.10	gi|429217643|ref|YP_007175633.1|	-	0.039	13.4	0.2	0.12	11.8	0.0	1.8	1	1	1	2	2	2	0	Chromatin	associated	protein	KTI12
AAA	PF00004.29	gi|429217643|ref|YP_007175633.1|	-	0.04	14.4	0.1	0.11	12.9	0.1	1.8	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
TPP_enzyme_M	PF00205.22	gi|429217643|ref|YP_007175633.1|	-	0.046	13.4	0.0	0.52	10.1	0.0	2.3	2	0	0	2	2	2	0	Thiamine	pyrophosphate	enzyme,	central	domain
ABC_tran	PF00005.27	gi|429217643|ref|YP_007175633.1|	-	0.047	14.2	1.2	0.099	13.2	0.1	2.0	1	1	1	2	2	2	0	ABC	transporter
AAA_22	PF13401.6	gi|429217643|ref|YP_007175633.1|	-	0.089	13.1	0.1	0.3	11.3	0.1	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_17	PF13207.6	gi|429217643|ref|YP_007175633.1|	-	0.12	12.9	0.2	0.12	12.9	0.2	2.5	2	2	0	2	2	2	0	AAA	domain
Ras	PF00071.22	gi|429217643|ref|YP_007175633.1|	-	0.19	11.3	4.7	8.9	5.9	0.1	2.8	3	0	0	3	3	3	0	Ras	family
Drf_FH3	PF06367.16	gi|429217643|ref|YP_007175633.1|	-	3.9	7.0	7.8	14	5.2	7.8	2.0	1	1	0	1	1	1	0	Diaphanous	FH3	Domain
CBS	PF00571.28	gi|429217644|ref|YP_007175634.1|	-	4e-49	164.9	6.6	1.5e-14	54.1	0.1	4.1	4	0	0	4	4	4	4	CBS	domain
DUF2591	PF10765.9	gi|429217644|ref|YP_007175634.1|	-	0.15	12.4	0.0	2	8.7	0.0	2.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2591)
CBS	PF00571.28	gi|429217645|ref|YP_007175635.1|	-	2.3e-46	156.0	6.8	6.8e-11	42.5	0.0	4.2	4	0	0	4	4	4	4	CBS	domain
DUF5601	PF18151.1	gi|429217645|ref|YP_007175635.1|	-	0.0058	16.9	0.4	0.51	10.7	0.2	2.8	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF5601)
DUF1202	PF06717.11	gi|429217645|ref|YP_007175635.1|	-	0.041	13.3	0.3	0.12	11.7	0.1	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1202)
RNA_pol_Rpb2_2	PF04561.14	gi|429217645|ref|YP_007175635.1|	-	0.043	13.4	2.6	0.064	12.9	0.7	2.3	2	1	0	2	2	2	0	RNA	polymerase	Rpb2,	domain	2
Peptidase_S51	PF03575.17	gi|429217645|ref|YP_007175635.1|	-	0.082	12.5	0.8	0.15	11.7	0.1	1.7	2	0	0	2	2	2	0	Peptidase	family	S51
CBS	PF00571.28	gi|429217646|ref|YP_007175636.1|	-	5e-32	110.1	1.8	1.5e-11	44.6	0.0	4.2	4	0	0	4	4	4	4	CBS	domain
AdoMet_Synthase	PF01941.19	gi|429217647|ref|YP_007175637.1|	-	7.2e-171	568.3	2.8	8.1e-171	568.2	2.8	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	synthetase	(AdoMet	synthetase)
DUF460	PF04312.13	gi|429217648|ref|YP_007175638.1|	-	6e-47	158.9	0.1	2e-46	157.2	0.1	2.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF460)
DUF2007	PF09413.10	gi|429217648|ref|YP_007175638.1|	-	0.018	15.2	0.3	6.3	7.1	0.0	3.4	4	0	0	4	4	4	0	Putative	prokaryotic	signal	transducing	protein
acVLRF1	PF18859.1	gi|429217648|ref|YP_007175638.1|	-	0.075	13.3	0.0	0.14	12.4	0.0	1.4	1	0	0	1	1	1	0	Actinobacteria/chloroflexi	VLRF1	release	factor
DUF4407	PF14362.6	gi|429217648|ref|YP_007175638.1|	-	0.36	10.2	6.5	0.66	9.3	6.5	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
XPG_I	PF00867.18	gi|429217648|ref|YP_007175638.1|	-	2.6	8.4	4.8	1.1	9.7	0.1	2.8	3	0	0	3	3	3	0	XPG	I-region
RIO1	PF01163.22	gi|429217649|ref|YP_007175639.1|	-	1.9e-42	145.0	0.2	2.6e-42	144.6	0.2	1.2	1	0	0	1	1	1	1	RIO1	family
Rio2_N	PF09202.11	gi|429217649|ref|YP_007175639.1|	-	1.4e-17	63.6	0.0	4.4e-17	62.1	0.0	1.8	1	0	0	1	1	1	1	Rio2,	N-terminal
Pkinase_fungal	PF17667.1	gi|429217649|ref|YP_007175639.1|	-	8.9e-08	31.3	0.1	1.1e-07	31.0	0.1	1.1	1	0	0	1	1	1	1	Fungal	protein	kinase
Pkinase	PF00069.25	gi|429217649|ref|YP_007175639.1|	-	4.6e-07	29.5	0.3	7.3e-07	28.8	0.3	1.3	1	0	0	1	1	1	1	Protein	kinase	domain
Kdo	PF06293.14	gi|429217649|ref|YP_007175639.1|	-	6e-06	25.8	0.0	1.1e-05	24.8	0.0	1.4	1	1	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
APH	PF01636.23	gi|429217649|ref|YP_007175639.1|	-	1.1e-05	25.5	0.0	5.1e-05	23.3	0.0	1.8	1	1	1	2	2	2	1	Phosphotransferase	enzyme	family
TrmB	PF01978.19	gi|429217649|ref|YP_007175639.1|	-	0.038	13.9	0.0	0.1	12.5	0.0	1.7	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_20	PF12840.7	gi|429217650|ref|YP_007175640.1|	-	3.7e-10	39.7	0.1	5.5e-10	39.2	0.1	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_5	PF01022.20	gi|429217650|ref|YP_007175640.1|	-	3.8e-09	36.3	0.1	5.7e-09	35.7	0.1	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
MarR	PF01047.22	gi|429217650|ref|YP_007175640.1|	-	1.7e-05	24.6	0.0	3e-05	23.9	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.6	gi|429217650|ref|YP_007175640.1|	-	1.9e-05	24.1	0.3	3.4e-05	23.3	0.3	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.19	gi|429217650|ref|YP_007175640.1|	-	0.0044	16.9	0.2	0.0074	16.2	0.2	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_27	PF13463.6	gi|429217650|ref|YP_007175640.1|	-	0.023	15.2	0.0	0.044	14.3	0.0	1.5	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
Fe_dep_repress	PF01325.19	gi|429217650|ref|YP_007175640.1|	-	0.028	14.6	0.1	0.12	12.5	0.0	2.0	2	0	0	2	2	2	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_34	PF13601.6	gi|429217650|ref|YP_007175640.1|	-	0.037	14.2	0.0	0.053	13.7	0.0	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
MarR_2	PF12802.7	gi|429217650|ref|YP_007175640.1|	-	0.058	13.3	0.1	0.084	12.8	0.1	1.3	1	0	0	1	1	1	0	MarR	family
HTH_AsnC-type	PF13404.6	gi|429217650|ref|YP_007175640.1|	-	0.064	13.1	0.3	0.11	12.3	0.3	1.5	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
DprA_WH	PF17782.1	gi|429217650|ref|YP_007175640.1|	-	0.066	13.3	0.1	0.11	12.6	0.1	1.4	1	1	0	1	1	1	0	DprA	winged	helix	domain
HTH_Crp_2	PF13545.6	gi|429217650|ref|YP_007175640.1|	-	0.091	12.7	0.0	0.13	12.2	0.0	1.4	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
AAA_assoc_C	PF09821.9	gi|429217651|ref|YP_007175641.1|	-	1.5e-18	67.4	1.0	2.7e-18	66.6	0.6	1.5	2	0	0	2	2	2	1	C-terminal	AAA-associated	domain
Fanconi_A_N	PF15865.5	gi|429217651|ref|YP_007175641.1|	-	0.0076	15.7	0.0	0.01	15.3	0.0	1.1	1	0	0	1	1	1	1	Fanconi	anaemia	group	A	protein	N	terminus
DrsE_2	PF13686.6	gi|429217652|ref|YP_007175642.1|	-	2.2e-23	82.9	1.6	1.4e-20	73.7	1.6	2.0	1	1	0	1	1	1	1	DsrE/DsrF/DrsH-like	family
DrsE	PF02635.15	gi|429217652|ref|YP_007175642.1|	-	6.1e-06	26.6	0.0	8.5e-06	26.1	0.0	1.2	1	0	0	1	1	1	1	DsrE/DsrF-like	family
TusA	PF01206.17	gi|429217653|ref|YP_007175643.1|	-	3e-19	68.6	0.0	3.4e-19	68.4	0.0	1.0	1	0	0	1	1	1	1	Sulfurtransferase	TusA
VRR_NUC	PF08774.11	gi|429217653|ref|YP_007175643.1|	-	0.11	12.6	0.0	0.11	12.6	0.0	1.2	1	0	0	1	1	1	0	VRR-NUC	domain
Pyr_redox_2	PF07992.14	gi|429217654|ref|YP_007175644.1|	-	1.9e-14	53.6	0.0	2.9e-13	49.7	0.0	2.0	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|429217654|ref|YP_007175644.1|	-	0.0038	17.8	0.1	1	10.0	0.0	3.0	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.19	gi|429217654|ref|YP_007175644.1|	-	0.032	13.5	0.0	0.24	10.6	0.0	2.1	2	0	0	2	2	2	0	FAD	binding	domain
NAD_binding_7	PF13241.6	gi|429217654|ref|YP_007175644.1|	-	0.049	14.1	0.0	0.14	12.6	0.0	1.9	1	1	0	1	1	1	0	Putative	NAD(P)-binding
OstA_2	PF13100.6	gi|429217654|ref|YP_007175644.1|	-	0.096	12.3	0.2	0.23	11.0	0.1	1.7	2	0	0	2	2	2	0	OstA-like	protein
RBD	PF02196.15	gi|429217654|ref|YP_007175644.1|	-	0.16	12.1	0.3	1.1	9.4	0.0	2.5	3	1	0	3	3	3	0	Raf-like	Ras-binding	domain
DUF1641	PF07849.11	gi|429217655|ref|YP_007175645.1|	-	1e-09	38.1	1.9	3e-09	36.6	0.1	2.6	3	1	0	3	3	3	1	Protein	of	unknown	function	(DUF1641)
Latarcin	PF10279.9	gi|429217655|ref|YP_007175645.1|	-	0.23	11.9	3.2	0.37	11.2	3.2	1.3	1	0	0	1	1	1	0	Latarcin	precursor
Pyr_redox_2	PF07992.14	gi|429217656|ref|YP_007175646.1|	-	3.8e-15	55.9	0.0	1.5e-14	53.9	0.0	1.8	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|429217656|ref|YP_007175646.1|	-	0.0016	19.0	0.1	0.031	14.8	0.0	2.4	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Trp_halogenase	PF04820.14	gi|429217656|ref|YP_007175646.1|	-	0.0038	16.1	0.0	0.0068	15.3	0.0	1.4	1	0	0	1	1	1	1	Tryptophan	halogenase
DUF1641	PF07849.11	gi|429217657|ref|YP_007175647.1|	-	1.2e-13	50.6	2.2	1.2e-13	50.6	2.2	2.4	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF1641)
RNA_pol_Rpb5_C	PF01191.19	gi|429217658|ref|YP_007175648.1|	-	1.6e-27	95.2	0.0	1.9e-27	94.9	0.0	1.0	1	0	0	1	1	1	1	RNA	polymerase	Rpb5,	C-terminal	domain
RNA_pol_Rpb2_6	PF00562.28	gi|429217659|ref|YP_007175649.1|	-	1.1e-125	419.8	0.0	1.5e-125	419.3	0.0	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	6
RNA_pol_Rpb2_1	PF04563.15	gi|429217659|ref|YP_007175649.1|	-	1.2e-52	178.4	0.1	1.9e-52	177.7	0.1	1.3	1	0	0	1	1	1	1	RNA	polymerase	beta	subunit
RNA_pol_Rpb2_2	PF04561.14	gi|429217659|ref|YP_007175649.1|	-	1.3e-29	103.3	0.1	2.4e-29	102.3	0.1	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	2
RNA_pol_Rpb2_7	PF04560.20	gi|429217659|ref|YP_007175649.1|	-	2.6e-29	101.5	0.0	6.9e-29	100.1	0.0	1.8	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	7
RNA_pol_Rpb2_3	PF04565.16	gi|429217659|ref|YP_007175649.1|	-	2.4e-26	91.7	0.0	5.4e-26	90.6	0.0	1.7	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	3
RNA_pol_Rpb2_4	PF04566.13	gi|429217659|ref|YP_007175649.1|	-	6.5e-21	74.4	0.1	1.7e-20	73.0	0.1	1.8	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	4
RNA_pol_Rpb2_5	PF04567.17	gi|429217659|ref|YP_007175649.1|	-	1.4e-06	28.7	0.1	3.5e-06	27.5	0.1	1.7	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	5
RNA_pol_Rpb1_1	PF04997.12	gi|429217660|ref|YP_007175650.1|	-	1.2e-80	271.2	0.1	2.2e-80	270.3	0.0	1.5	2	0	0	2	2	2	1	RNA	polymerase	Rpb1,	domain	1
RNA_pol_Rpb1_2	PF00623.20	gi|429217660|ref|YP_007175650.1|	-	8.3e-72	240.8	0.0	2e-71	239.5	0.0	1.7	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	2
RNA_pol_Rpb1_3	PF04983.18	gi|429217660|ref|YP_007175650.1|	-	8.8e-36	123.2	0.0	2.1e-35	122.0	0.0	1.7	2	0	0	2	2	2	1	RNA	polymerase	Rpb1,	domain	3
RNA_pol_Rpb1_4	PF05000.17	gi|429217660|ref|YP_007175650.1|	-	9.8e-32	109.1	0.1	2.8e-31	107.6	0.0	1.9	1	1	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	4
RNA_pol_Rpb1_5	PF04998.17	gi|429217660|ref|YP_007175650.1|	-	5.2e-28	98.2	0.1	1.3e-27	96.9	0.1	1.6	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	5
zf-ribbon_3	PF13248.6	gi|429217660|ref|YP_007175650.1|	-	0.056	12.9	5.5	2.6	7.6	0.1	3.3	3	0	0	3	3	3	0	zinc-ribbon	domain
zf-RING_7	PF02591.15	gi|429217660|ref|YP_007175650.1|	-	1.5	9.1	8.3	2.2	8.6	0.2	3.0	3	0	0	3	3	3	0	C4-type	zinc	ribbon	domain
zinc_ribbon_2	PF13240.6	gi|429217660|ref|YP_007175650.1|	-	4.1	7.3	10.6	11	5.9	0.3	3.4	3	0	0	3	3	3	0	zinc-ribbon	domain
RNA_pol_Rpb1_5	PF04998.17	gi|429217661|ref|YP_007175651.1|	-	1.7e-54	185.0	3.4	2.5e-54	184.5	3.4	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	5
Ribosomal_L7Ae	PF01248.26	gi|429217662|ref|YP_007175652.1|	-	1.9e-17	62.7	0.0	2.3e-17	62.5	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
KH_2	PF07650.17	gi|429217663|ref|YP_007175653.1|	-	8.7e-16	57.5	3.7	3.3e-09	36.4	0.0	2.1	1	1	1	2	2	2	2	KH	domain
KH_4	PF13083.6	gi|429217663|ref|YP_007175653.1|	-	9.1e-13	47.9	0.8	1.9e-06	27.6	0.5	2.2	2	0	0	2	2	2	2	KH	domain
KH_5	PF13184.6	gi|429217663|ref|YP_007175653.1|	-	7.4e-12	45.2	3.5	8e-10	38.7	0.3	2.3	2	0	0	2	2	2	2	NusA-like	KH	domain
KH_1	PF00013.29	gi|429217663|ref|YP_007175653.1|	-	9.7e-05	22.1	0.8	0.098	12.5	0.1	2.3	2	0	0	2	2	2	2	KH	domain
Ribosom_S12_S23	PF00164.25	gi|429217665|ref|YP_007175655.1|	-	2.3e-44	149.7	0.3	3.1e-44	149.2	0.3	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S12/S23
GH-E	PF14410.6	gi|429217665|ref|YP_007175655.1|	-	0.11	12.9	0.1	0.18	12.2	0.1	1.3	1	0	0	1	1	1	0	HNH/ENDO	VII	superfamily	nuclease	with	conserved	GHE	residues
DNase-RNase	PF02577.14	gi|429217666|ref|YP_007175656.1|	-	1.9e-07	30.8	0.0	2.6e-07	30.3	0.0	1.2	1	0	0	1	1	1	1	Bifunctional	nuclease
Ribosomal_S7	PF00177.21	gi|429217667|ref|YP_007175657.1|	-	3.3e-42	143.6	0.1	4.1e-42	143.3	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S7p/S5e
GTP_EFTU	PF00009.27	gi|429217668|ref|YP_007175658.1|	-	1.1e-55	188.2	0.0	1.4e-55	187.8	0.0	1.2	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D3	PF03143.17	gi|429217668|ref|YP_007175658.1|	-	1.1e-36	125.6	0.1	3.6e-36	123.9	0.1	1.9	2	0	0	2	2	2	1	Elongation	factor	Tu	C-terminal	domain
GTP_EFTU_D2	PF03144.25	gi|429217668|ref|YP_007175658.1|	-	7.3e-15	55.1	2.5	1.5e-14	54.1	2.5	1.6	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.23	gi|429217668|ref|YP_007175658.1|	-	2.5e-06	27.6	0.0	0.0013	18.8	0.0	2.4	2	0	0	2	2	2	2	50S	ribosome-binding	GTPase
GTP_EFTU_D4	PF14578.6	gi|429217668|ref|YP_007175658.1|	-	0.00029	20.7	1.9	0.00073	19.4	1.9	1.7	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	4
Amelogenin	PF02948.15	gi|429217668|ref|YP_007175658.1|	-	0.036	14.7	0.2	0.092	13.4	0.1	1.6	2	0	0	2	2	2	0	Amelogenin
MRP-S22	PF10245.9	gi|429217668|ref|YP_007175658.1|	-	0.052	13.3	0.0	0.081	12.7	0.0	1.2	1	0	0	1	1	1	0	Mitochondrial	28S	ribosomal	protein	S22
TetR_C_2	PF08361.11	gi|429217668|ref|YP_007175658.1|	-	0.11	12.6	0.0	0.21	11.7	0.0	1.4	1	0	0	1	1	1	0	MAATS-type	transcriptional	repressor,	C-terminal	region
Ribosomal_S10	PF00338.22	gi|429217669|ref|YP_007175659.1|	-	2.3e-29	101.5	0.0	2.5e-29	101.4	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S10p/S20e
CPSase_sm_chain	PF00988.22	gi|429217670|ref|YP_007175660.1|	-	6.4e-46	155.3	0.0	9.3e-46	154.8	0.0	1.2	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	small	chain,	CPSase	domain
GATase	PF00117.28	gi|429217670|ref|YP_007175660.1|	-	3.5e-39	134.6	0.0	9.5e-39	133.1	0.0	1.7	2	0	0	2	2	2	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.13	gi|429217670|ref|YP_007175660.1|	-	2.2e-08	34.1	0.3	1.6e-06	28.0	0.3	2.2	1	1	0	1	1	1	1	Peptidase	C26
CPSase_L_D2	PF02786.17	gi|429217671|ref|YP_007175661.1|	-	9.3e-92	306.3	0.0	1.2e-61	207.9	0.0	2.4	2	0	0	2	2	2	2	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
CPSase_L_D3	PF02787.19	gi|429217671|ref|YP_007175661.1|	-	5.2e-30	104.3	0.8	3.3e-29	101.7	0.5	2.6	2	0	0	2	2	2	1	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
ATP-grasp	PF02222.22	gi|429217671|ref|YP_007175661.1|	-	4.1e-14	52.5	0.0	1.7e-08	34.2	0.0	2.6	2	0	0	2	2	2	2	ATP-grasp	domain
Dala_Dala_lig_C	PF07478.13	gi|429217671|ref|YP_007175661.1|	-	9.3e-12	44.9	0.3	0.00018	21.1	0.0	2.9	2	1	0	2	2	2	2	D-ala	D-ala	ligase	C-terminus
ATPgrasp_Ter	PF15632.6	gi|429217671|ref|YP_007175661.1|	-	2e-10	40.5	0.0	3.5e-05	23.6	0.0	2.5	2	0	0	2	2	2	2	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
RimK	PF08443.11	gi|429217671|ref|YP_007175661.1|	-	2.9e-06	27.0	0.1	0.11	12.1	0.0	3.0	3	0	0	3	3	3	2	RimK-like	ATP-grasp	domain
ATP-grasp_3	PF02655.14	gi|429217671|ref|YP_007175661.1|	-	4.1e-06	26.9	0.3	0.13	12.3	0.1	3.1	2	1	0	2	2	2	2	ATP-grasp	domain
GARS_A	PF01071.19	gi|429217671|ref|YP_007175661.1|	-	4.7e-05	23.3	0.0	0.12	12.2	0.0	3.1	2	1	0	2	2	2	2	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATP-grasp_5	PF13549.6	gi|429217671|ref|YP_007175661.1|	-	0.014	14.8	0.0	4.3	6.7	0.0	2.9	2	1	1	3	3	3	0	ATP-grasp	domain
MGS	PF02142.22	gi|429217671|ref|YP_007175661.1|	-	0.04	14.1	0.6	30	4.9	0.1	3.7	4	1	0	4	4	4	0	MGS-like	domain
PHR	PF08005.12	gi|429217671|ref|YP_007175661.1|	-	0.044	14.5	0.2	0.15	12.8	0.2	1.9	1	0	0	1	1	1	0	PHR	domain
Raf1_HTH	PF18579.1	gi|429217671|ref|YP_007175661.1|	-	0.15	11.8	0.0	1.1	9.0	0.0	2.3	2	0	0	2	2	2	0	Rubisco	accumulation	factor	1	helix	turn	helix	domain
NAD_binding_2	PF03446.15	gi|429217673|ref|YP_007175663.1|	-	8.3e-32	110.5	0.0	1.1e-31	110.1	0.0	1.2	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_binding_11	PF14833.6	gi|429217673|ref|YP_007175663.1|	-	4.4e-23	81.8	0.0	6.6e-23	81.3	0.0	1.3	1	0	0	1	1	1	1	NAD-binding	of	NADP-dependent	3-hydroxyisobutyrate	dehydrogenase
F420_oxidored	PF03807.17	gi|429217673|ref|YP_007175663.1|	-	1.3e-06	28.9	0.1	4.2e-06	27.2	0.0	1.9	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
2-Hacid_dh_C	PF02826.19	gi|429217673|ref|YP_007175663.1|	-	4.5e-06	26.1	0.0	7.5e-06	25.4	0.0	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
IlvN	PF07991.12	gi|429217673|ref|YP_007175663.1|	-	8.1e-06	25.5	0.0	1.4e-05	24.7	0.0	1.4	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
Shikimate_DH	PF01488.20	gi|429217673|ref|YP_007175663.1|	-	1.6e-05	25.0	0.0	3.9e-05	23.7	0.0	1.6	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
GFO_IDH_MocA	PF01408.22	gi|429217673|ref|YP_007175663.1|	-	0.007	17.2	0.0	0.016	16.1	0.0	1.6	2	0	0	2	2	2	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
DUF3243	PF11588.8	gi|429217673|ref|YP_007175663.1|	-	0.023	15.0	0.0	0.058	13.7	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3243)
PDH	PF02153.17	gi|429217673|ref|YP_007175663.1|	-	0.036	13.1	0.1	0.051	12.6	0.1	1.3	1	0	0	1	1	1	0	Prephenate	dehydrogenase
BLYB	PF05289.11	gi|429217673|ref|YP_007175663.1|	-	0.039	14.2	2.3	0.082	13.1	1.5	2.0	2	0	0	2	2	2	0	Borrelia	hemolysin	accessory	protein
DUF3791	PF12668.7	gi|429217673|ref|YP_007175663.1|	-	0.33	11.0	1.7	1.1e+02	3.0	0.1	3.3	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3791)
Penicil_amidase	PF01804.18	gi|429217674|ref|YP_007175664.1|	-	4.6e-141	472.0	0.0	5.5e-141	471.8	0.0	1.0	1	0	0	1	1	1	1	Penicillin	amidase
UBA_3	PF09288.10	gi|429217676|ref|YP_007175666.1|	-	0.082	12.7	0.0	0.42	10.5	0.0	2.0	2	0	0	2	2	2	0	Fungal	ubiquitin-associated	domain
CN_hydrolase	PF00795.22	gi|429217677|ref|YP_007175667.1|	-	4.3e-52	177.0	0.0	4.8e-52	176.9	0.0	1.0	1	0	0	1	1	1	1	Carbon-nitrogen	hydrolase
DUF2624	PF11116.8	gi|429217677|ref|YP_007175667.1|	-	0.085	13.8	0.6	0.45	11.4	0.6	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2624)
SHP	PF03579.13	gi|429217678|ref|YP_007175668.1|	-	0.0084	16.1	0.1	0.009	16.0	0.1	1.1	1	0	0	1	1	1	1	Small	hydrophobic	protein
Adeno_E3B	PF03376.14	gi|429217678|ref|YP_007175668.1|	-	0.029	14.6	0.3	0.035	14.3	0.3	1.2	1	0	0	1	1	1	0	Adenovirus	E3B	protein
DUF4131	PF13567.6	gi|429217678|ref|YP_007175668.1|	-	0.13	11.9	0.0	0.14	11.8	0.0	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
Podoplanin	PF05808.11	gi|429217678|ref|YP_007175668.1|	-	1.5	8.9	3.2	1.7	8.7	3.2	1.1	1	0	0	1	1	1	0	Podoplanin
Thermopsin	PF05317.11	gi|429217679|ref|YP_007175669.1|	-	1.7e-29	103.1	31.9	1.7e-29	103.1	31.9	4.3	4	1	1	5	5	5	1	Thermopsin
DUF5068	PF16781.5	gi|429217679|ref|YP_007175669.1|	-	0.01	15.6	13.1	2	8.2	0.5	4.1	1	1	3	4	4	4	0	Domain	of	unknown	function	(DUF5068)
DUF5367	PF17329.2	gi|429217679|ref|YP_007175669.1|	-	0.22	11.6	11.1	1.3	9.1	0.1	4.6	5	0	0	5	5	5	0	Family	of	unknown	function	(DUF5367)
DnaA_N	PF11638.8	gi|429217679|ref|YP_007175669.1|	-	1.2	8.9	4.9	1e+02	2.7	0.1	3.9	3	0	0	3	3	3	0	DnaA	N-terminal	domain
Caroten_synth	PF04240.12	gi|429217680|ref|YP_007175670.1|	-	2.3e-34	119.1	20.1	3.8e-34	118.4	20.1	1.3	1	0	0	1	1	1	1	Carotenoid	biosynthesis	protein
LysE	PF01810.18	gi|429217681|ref|YP_007175671.1|	-	2.1e-13	50.2	14.4	2.9e-13	49.7	14.4	1.1	1	0	0	1	1	1	1	LysE	type	translocator
DUF3834	PF12916.7	gi|429217682|ref|YP_007175672.1|	-	3.8e-62	209.1	3.0	4.3e-62	209.0	3.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3834)
SBP_bac_3	PF00497.20	gi|429217682|ref|YP_007175672.1|	-	0.0052	16.2	0.0	0.0084	15.6	0.0	1.5	1	1	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	3
DUF2661	PF10860.8	gi|429217682|ref|YP_007175672.1|	-	0.019	15.0	0.0	0.056	13.6	0.0	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2661)
NMT1	PF09084.11	gi|429217682|ref|YP_007175672.1|	-	0.047	13.6	0.1	0.72	9.7	0.0	2.1	2	0	0	2	2	2	0	NMT1/THI5	like
DUF2157	PF09925.9	gi|429217683|ref|YP_007175673.1|	-	0.011	15.5	0.0	0.014	15.2	0.0	1.3	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2157)
DUF485	PF04341.12	gi|429217683|ref|YP_007175673.1|	-	0.019	14.9	1.0	0.032	14.2	1.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF485
DUF202	PF02656.15	gi|429217683|ref|YP_007175673.1|	-	0.1	13.1	2.2	0.16	12.5	2.2	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF202)
Thiolase_N	PF00108.23	gi|429217684|ref|YP_007175674.1|	-	4e-64	216.5	0.0	9.4e-64	215.3	0.0	1.6	2	0	0	2	2	2	1	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.18	gi|429217684|ref|YP_007175674.1|	-	9.6e-49	164.1	0.5	1.9e-48	163.2	0.5	1.5	1	0	0	1	1	1	1	Thiolase,	C-terminal	domain
ketoacyl-synt	PF00109.26	gi|429217684|ref|YP_007175674.1|	-	1e-05	25.3	0.6	6e-05	22.7	0.4	2.2	2	1	0	2	2	2	1	Beta-ketoacyl	synthase,	N-terminal	domain
ACP_syn_III_C	PF08541.10	gi|429217684|ref|YP_007175674.1|	-	0.0036	17.5	0.2	0.012	15.7	0.2	1.9	1	1	0	1	1	1	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III	C	terminal
SpoVAD	PF07451.11	gi|429217684|ref|YP_007175674.1|	-	0.013	14.2	0.1	0.098	11.3	0.0	2.0	2	0	0	2	2	2	0	Stage	V	sporulation	protein	AD	(SpoVAD)
Apocytochr_F_N	PF16639.5	gi|429217684|ref|YP_007175674.1|	-	0.033	14.5	0.0	0.085	13.1	0.0	1.6	1	0	0	1	1	1	0	Apocytochrome	F,	N-terminal
Ketoacyl-synt_C	PF02801.22	gi|429217684|ref|YP_007175674.1|	-	0.53	10.3	3.1	5.2	7.1	0.3	3.5	4	1	0	4	4	4	0	Beta-ketoacyl	synthase,	C-terminal	domain
3HCDH_N	PF02737.18	gi|429217685|ref|YP_007175675.1|	-	6.7e-66	221.6	2.5	6.7e-66	221.6	2.5	2.0	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
ECH_1	PF00378.20	gi|429217685|ref|YP_007175675.1|	-	1e-53	182.2	0.0	2e-53	181.3	0.0	1.5	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase
3HCDH	PF00725.22	gi|429217685|ref|YP_007175675.1|	-	5.1e-34	116.8	0.0	4.7e-23	81.6	0.0	2.8	2	0	0	2	2	2	2	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
ECH_2	PF16113.5	gi|429217685|ref|YP_007175675.1|	-	1.2e-31	110.4	0.3	6e-28	98.3	0.0	2.7	2	1	1	3	3	3	2	Enoyl-CoA	hydratase/isomerase
NAD_binding_2	PF03446.15	gi|429217685|ref|YP_007175675.1|	-	1.8e-07	31.5	0.1	5e-07	30.0	0.1	1.8	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.23	gi|429217685|ref|YP_007175675.1|	-	3.5e-06	27.1	0.1	1e-05	25.6	0.1	1.8	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
F420_oxidored	PF03807.17	gi|429217685|ref|YP_007175675.1|	-	0.00028	21.4	1.4	0.00084	19.9	0.3	2.6	2	0	0	2	2	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
AlaDh_PNT_C	PF01262.21	gi|429217685|ref|YP_007175675.1|	-	0.00075	18.8	0.5	0.002	17.4	0.2	1.8	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
UDPG_MGDP_dh_N	PF03721.14	gi|429217685|ref|YP_007175675.1|	-	0.00077	19.1	0.7	0.0019	17.8	0.7	1.7	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
NAD_binding_7	PF13241.6	gi|429217685|ref|YP_007175675.1|	-	0.029	14.8	0.2	0.1	13.1	0.2	2.0	1	0	0	1	1	1	0	Putative	NAD(P)-binding
IlvN	PF07991.12	gi|429217685|ref|YP_007175675.1|	-	0.033	13.7	2.8	0.78	9.3	2.3	2.6	2	1	0	2	2	2	0	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
Pyr_redox_2	PF07992.14	gi|429217685|ref|YP_007175675.1|	-	0.08	12.2	0.1	0.15	11.3	0.1	1.5	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
2-Hacid_dh_C	PF02826.19	gi|429217685|ref|YP_007175675.1|	-	0.23	10.8	1.0	1.4	8.3	1.0	2.1	1	1	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
adh_short_C2	PF13561.6	gi|429217686|ref|YP_007175676.1|	-	5.5e-56	189.8	0.3	6.5e-56	189.5	0.3	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.25	gi|429217686|ref|YP_007175676.1|	-	1.8e-53	180.9	0.2	1.8e-53	180.9	0.2	1.3	2	0	0	2	2	2	1	short	chain	dehydrogenase
KR	PF08659.10	gi|429217686|ref|YP_007175676.1|	-	1.2e-14	54.6	0.1	1.8e-14	54.1	0.1	1.2	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.21	gi|429217686|ref|YP_007175676.1|	-	0.00055	19.5	0.0	0.00076	19.0	0.0	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
DUF1776	PF08643.10	gi|429217686|ref|YP_007175676.1|	-	0.0021	17.5	0.1	0.0028	17.1	0.1	1.2	1	0	0	1	1	1	1	Fungal	family	of	unknown	function	(DUF1776)
Sigma_reg_C	PF13791.6	gi|429217686|ref|YP_007175676.1|	-	0.0038	17.5	0.5	0.0072	16.5	0.5	1.4	1	0	0	1	1	1	1	Sigma	factor	regulator	C-terminal
Polysacc_synt_2	PF02719.15	gi|429217686|ref|YP_007175676.1|	-	0.0082	15.3	0.1	0.013	14.6	0.1	1.3	1	0	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_10	PF13460.6	gi|429217686|ref|YP_007175676.1|	-	0.013	15.4	0.0	0.016	15.1	0.0	1.2	1	0	0	1	1	1	0	NAD(P)H-binding
bPH_3	PF14470.6	gi|429217686|ref|YP_007175676.1|	-	0.19	12.1	1.9	0.57	10.6	0.7	2.4	2	0	0	2	2	2	0	Bacterial	PH	domain
Methyltransf_11	PF08241.12	gi|429217687|ref|YP_007175677.1|	-	2.1e-15	57.1	0.0	3.1e-15	56.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|429217687|ref|YP_007175677.1|	-	1.5e-11	44.4	0.0	1.9e-11	44.1	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|429217687|ref|YP_007175677.1|	-	6.2e-10	39.7	0.0	1e-09	38.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|429217687|ref|YP_007175677.1|	-	1.4e-05	24.9	0.0	1.9e-05	24.5	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|429217687|ref|YP_007175677.1|	-	2.2e-05	25.1	0.0	5e-05	24.0	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|429217687|ref|YP_007175677.1|	-	5.8e-05	22.5	0.1	9.6e-05	21.8	0.0	1.5	2	0	0	2	2	2	1	ubiE/COQ5	methyltransferase	family
MetW	PF07021.12	gi|429217687|ref|YP_007175677.1|	-	0.0024	17.5	0.0	0.0039	16.8	0.0	1.5	1	1	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
Lactamase_B	PF00753.27	gi|429217688|ref|YP_007175678.1|	-	2.1e-23	83.4	0.0	2.8e-23	83.0	0.0	1.2	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|429217688|ref|YP_007175678.1|	-	2.1e-06	27.4	0.0	3.1e-06	26.9	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_6	PF16661.5	gi|429217688|ref|YP_007175678.1|	-	0.00051	19.5	0.0	0.0063	16.0	0.0	2.0	2	0	0	2	2	2	1	Metallo-beta-lactamase	superfamily	domain
RMMBL	PF07521.12	gi|429217688|ref|YP_007175678.1|	-	0.11	12.5	0.1	3.2	7.7	0.0	2.3	2	0	0	2	2	2	0	Zn-dependent	metallo-hydrolase	RNA	specificity	domain
Methyltrn_RNA_3	PF02598.17	gi|429217689|ref|YP_007175679.1|	-	1.4e-37	129.8	0.0	3.7e-37	128.4	0.0	1.6	1	1	0	1	1	1	1	Putative	RNA	methyltransferase
B12-binding	PF02310.19	gi|429217689|ref|YP_007175679.1|	-	0.032	14.3	0.0	0.049	13.7	0.0	1.3	1	0	0	1	1	1	0	B12	binding	domain
PEP_mutase	PF13714.6	gi|429217690|ref|YP_007175680.1|	-	4.4e-57	193.3	0.2	5.2e-57	193.1	0.2	1.0	1	0	0	1	1	1	1	Phosphoenolpyruvate	phosphomutase
ICL	PF00463.21	gi|429217690|ref|YP_007175680.1|	-	8e-16	57.6	0.3	1.1e-15	57.1	0.3	1.1	1	0	0	1	1	1	1	Isocitrate	lyase	family
Lactamase_B	PF00753.27	gi|429217691|ref|YP_007175681.1|	-	1.3e-11	44.8	0.0	2.2e-11	44.2	0.0	1.6	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|429217691|ref|YP_007175681.1|	-	3.2e-06	26.8	0.0	3.7e-06	26.6	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_6	PF16661.5	gi|429217691|ref|YP_007175681.1|	-	0.057	12.8	0.0	0.1	12.0	0.0	1.3	1	0	0	1	1	1	0	Metallo-beta-lactamase	superfamily	domain
NosD	PF05048.13	gi|429217692|ref|YP_007175682.1|	-	1.6e-17	63.6	46.7	1.6e-17	63.6	46.7	2.9	2	1	0	2	2	2	1	Periplasmic	copper-binding	protein	(NosD)
Beta_helix	PF13229.6	gi|429217692|ref|YP_007175682.1|	-	8.5e-05	22.4	29.2	8.5e-05	22.4	29.2	2.4	1	1	1	2	2	2	2	Right	handed	beta	helix	region
Acetyltransf_1	PF00583.25	gi|429217694|ref|YP_007175684.1|	-	6.5e-21	74.7	0.1	7.8e-21	74.5	0.1	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.7	gi|429217694|ref|YP_007175684.1|	-	1.2e-17	64.1	0.1	1.4e-17	63.9	0.1	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.7	gi|429217694|ref|YP_007175684.1|	-	2.5e-14	53.5	0.1	3.3e-14	53.0	0.1	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.10	gi|429217694|ref|YP_007175684.1|	-	2.2e-10	40.4	0.0	3.2e-10	39.8	0.0	1.3	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_9	PF13527.7	gi|429217694|ref|YP_007175684.1|	-	1.2e-09	38.3	0.0	2.9e-08	33.8	0.0	2.0	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.7	gi|429217694|ref|YP_007175684.1|	-	8.3e-07	29.3	0.5	2.2e-06	27.9	0.5	1.6	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.6	gi|429217694|ref|YP_007175684.1|	-	0.00062	19.9	0.0	0.00096	19.2	0.0	1.3	1	0	0	1	1	1	1	GCN5-related	N-acetyl-transferase
GNAT_acetyltran	PF12746.7	gi|429217694|ref|YP_007175684.1|	-	0.0081	15.8	0.0	0.009	15.6	0.0	1.2	1	0	0	1	1	1	1	GNAT	acetyltransferase
GNAT_acetyltr_2	PF13718.6	gi|429217694|ref|YP_007175684.1|	-	0.039	13.4	0.0	0.051	13.0	0.0	1.2	1	0	0	1	1	1	0	GNAT	acetyltransferase	2
Acetyltransf_15	PF17013.5	gi|429217694|ref|YP_007175684.1|	-	0.049	13.1	1.4	0.059	12.8	1.4	1.2	1	0	0	1	1	1	0	Putative	acetyl-transferase
Acetyltransf_13	PF13880.6	gi|429217694|ref|YP_007175684.1|	-	0.12	12.3	0.0	0.22	11.5	0.0	1.4	1	0	0	1	1	1	0	ESCO1/2	acetyl-transferase
DZR	PF12773.7	gi|429217695|ref|YP_007175685.1|	-	0.023	14.7	0.2	0.045	13.8	0.2	1.4	1	1	0	1	1	1	0	Double	zinc	ribbon
FeS	PF04060.13	gi|429217695|ref|YP_007175685.1|	-	0.18	11.5	1.8	0.3	10.8	0.6	1.9	2	0	0	2	2	2	0	Putative	Fe-S	cluster
zf-ribbon_3	PF13248.6	gi|429217695|ref|YP_007175685.1|	-	0.39	10.2	5.8	6	6.4	0.5	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
Epimerase	PF01370.21	gi|429217696|ref|YP_007175686.1|	-	9.1e-56	189.0	0.0	1.4e-55	188.4	0.0	1.3	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
GDP_Man_Dehyd	PF16363.5	gi|429217696|ref|YP_007175686.1|	-	3.8e-53	181.0	0.1	6.4e-53	180.3	0.1	1.4	1	1	0	1	1	1	1	GDP-mannose	4,6	dehydratase
3Beta_HSD	PF01073.19	gi|429217696|ref|YP_007175686.1|	-	2.4e-24	85.8	0.2	3.6e-24	85.3	0.2	1.2	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
RmlD_sub_bind	PF04321.17	gi|429217696|ref|YP_007175686.1|	-	7.7e-20	71.1	0.0	1e-19	70.7	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Polysacc_synt_2	PF02719.15	gi|429217696|ref|YP_007175686.1|	-	2.8e-15	56.2	0.1	2.7e-14	53.0	0.1	2.1	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_10	PF13460.6	gi|429217696|ref|YP_007175686.1|	-	2.1e-11	44.1	0.0	3.6e-11	43.3	0.0	1.4	1	0	0	1	1	1	1	NAD(P)H-binding
NAD_binding_4	PF07993.12	gi|429217696|ref|YP_007175686.1|	-	9.2e-08	31.6	0.2	9.3e-06	25.0	0.2	2.5	1	1	0	1	1	1	1	Male	sterility	protein
NmrA	PF05368.13	gi|429217696|ref|YP_007175686.1|	-	2.1e-06	27.5	0.0	1.4e-05	24.8	0.0	2.0	2	0	0	2	2	2	1	NmrA-like	family
adh_short	PF00106.25	gi|429217696|ref|YP_007175686.1|	-	3e-06	26.8	0.0	3.3e-05	23.4	0.0	2.3	2	0	0	2	2	2	1	short	chain	dehydrogenase
Ldh_1_N	PF00056.23	gi|429217696|ref|YP_007175686.1|	-	0.0088	16.1	0.0	0.018	15.2	0.0	1.5	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	NAD	binding	domain
Pyr_redox	PF00070.27	gi|429217696|ref|YP_007175686.1|	-	0.01	16.3	0.0	0.43	11.2	0.0	2.7	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
TrkA_N	PF02254.18	gi|429217696|ref|YP_007175686.1|	-	0.014	15.7	0.0	0.027	14.7	0.0	1.7	1	1	0	1	1	1	0	TrkA-N	domain
KR	PF08659.10	gi|429217696|ref|YP_007175686.1|	-	0.033	14.1	0.2	0.15	12.0	0.2	2.1	1	1	0	1	1	1	0	KR	domain
3HCDH_N	PF02737.18	gi|429217696|ref|YP_007175686.1|	-	0.05	13.5	0.0	0.094	12.6	0.0	1.4	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
GCD14	PF08704.10	gi|429217697|ref|YP_007175687.1|	-	1.9e-27	96.5	0.0	3.3e-27	95.7	0.0	1.4	1	1	1	2	2	2	1	tRNA	methyltransferase	complex	GCD14	subunit
Methyltransf_31	PF13847.6	gi|429217697|ref|YP_007175687.1|	-	4.5e-11	42.8	0.0	6.8e-11	42.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.19	gi|429217697|ref|YP_007175687.1|	-	1.3e-09	38.1	0.0	1.8e-09	37.7	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_25	PF13649.6	gi|429217697|ref|YP_007175687.1|	-	1.2e-07	32.3	0.0	2.6e-07	31.2	0.0	1.6	2	0	0	2	2	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|429217697|ref|YP_007175687.1|	-	2.1e-06	27.3	0.0	2.6e-06	26.9	0.0	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_3	PF01596.17	gi|429217697|ref|YP_007175687.1|	-	3.3e-05	23.2	0.1	4.8e-05	22.6	0.1	1.2	1	0	0	1	1	1	1	O-methyltransferase
MTS	PF05175.14	gi|429217697|ref|YP_007175687.1|	-	3.6e-05	23.4	0.0	5.7e-05	22.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
RrnaAD	PF00398.20	gi|429217697|ref|YP_007175687.1|	-	3.6e-05	23.0	0.0	5e-05	22.5	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_4	PF02390.17	gi|429217697|ref|YP_007175687.1|	-	0.00042	19.8	0.1	0.00074	19.0	0.1	1.4	1	0	0	1	1	1	1	Putative	methyltransferase
Methyltransf_12	PF08242.12	gi|429217697|ref|YP_007175687.1|	-	0.0006	20.5	0.0	0.0014	19.3	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|429217697|ref|YP_007175687.1|	-	0.00062	20.4	0.0	0.0018	18.9	0.0	1.7	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|429217697|ref|YP_007175687.1|	-	0.00091	19.1	0.0	0.0012	18.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.13	gi|429217697|ref|YP_007175687.1|	-	0.0067	15.9	0.0	0.017	14.5	0.0	1.5	1	1	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_16	PF10294.9	gi|429217697|ref|YP_007175687.1|	-	0.0085	15.8	0.1	0.018	14.8	0.0	1.6	2	0	0	2	2	2	1	Lysine	methyltransferase
Cons_hypoth95	PF03602.15	gi|429217697|ref|YP_007175687.1|	-	0.0099	15.5	0.0	0.026	14.2	0.0	1.7	2	0	0	2	2	2	1	Conserved	hypothetical	protein	95
TRM	PF02005.16	gi|429217697|ref|YP_007175687.1|	-	0.013	14.7	0.1	0.021	14.0	0.0	1.5	2	0	0	2	2	2	0	N2,N2-dimethylguanosine	tRNA	methyltransferase
Methyltransf_18	PF12847.7	gi|429217697|ref|YP_007175687.1|	-	0.035	14.0	0.1	0.087	12.8	0.0	1.6	2	0	0	2	2	2	0	Methyltransferase	domain
EIF_2_alpha	PF07541.12	gi|429217697|ref|YP_007175687.1|	-	0.036	14.2	0.1	1.6	8.9	0.1	2.6	2	1	0	2	2	2	0	Eukaryotic	translation	initiation	factor	2	alpha	subunit
DUF5398	PF17376.2	gi|429217697|ref|YP_007175687.1|	-	0.05	14.2	0.4	0.15	12.7	0.0	1.9	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5398)
UPF0020	PF01170.18	gi|429217697|ref|YP_007175687.1|	-	0.14	11.8	0.0	0.26	11.0	0.0	1.4	1	0	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
Methyltr_RsmB-F	PF01189.17	gi|429217697|ref|YP_007175687.1|	-	0.16	11.6	0.0	0.28	10.8	0.0	1.4	1	0	0	1	1	1	0	16S	rRNA	methyltransferase	RsmB/F
CCDC106	PF15794.5	gi|429217698|ref|YP_007175688.1|	-	0.018	14.8	2.0	0.035	13.8	2.0	1.4	1	0	0	1	1	1	0	Coiled-coil	domain-containing	protein	106
Rx_N	PF18052.1	gi|429217698|ref|YP_007175688.1|	-	0.065	13.5	1.3	0.065	13.5	1.3	2.0	2	0	0	2	2	2	0	Rx	N-terminal	domain
Sec16	PF12932.7	gi|429217698|ref|YP_007175688.1|	-	0.32	11.6	0.2	0.32	11.6	0.2	2.0	2	1	0	2	2	2	0	Vesicle	coat	trafficking	protein	Sec16	mid-region
AMP-binding	PF00501.28	gi|429217699|ref|YP_007175689.1|	-	7.1e-71	239.0	0.0	9e-71	238.7	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.6	gi|429217699|ref|YP_007175689.1|	-	1.2e-20	74.2	0.1	2.2e-20	73.4	0.1	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
DUF5386	PF17360.2	gi|429217699|ref|YP_007175689.1|	-	0.046	13.7	0.0	0.086	12.8	0.0	1.3	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5386)
Methyltransf_31	PF13847.6	gi|429217700|ref|YP_007175690.1|	-	5.4e-11	42.5	0.0	7.9e-11	42.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|429217700|ref|YP_007175690.1|	-	7.2e-10	39.5	0.0	1.5e-09	38.4	0.0	1.5	2	0	0	2	2	1	1	Methyltransferase	domain
DOT1	PF08123.13	gi|429217700|ref|YP_007175690.1|	-	3.2e-09	36.6	0.0	4.8e-08	32.8	0.0	2.0	1	1	0	1	1	1	1	Histone	methylation	protein	DOT1
Methyltransf_4	PF02390.17	gi|429217700|ref|YP_007175690.1|	-	5.2e-09	35.8	0.0	6.7e-09	35.4	0.0	1.3	1	0	0	1	1	1	1	Putative	methyltransferase
Methyltransf_2	PF00891.18	gi|429217700|ref|YP_007175690.1|	-	2.4e-08	33.6	0.0	3e-08	33.2	0.0	1.1	1	0	0	1	1	1	1	O-methyltransferase	domain
RrnaAD	PF00398.20	gi|429217700|ref|YP_007175690.1|	-	1.1e-07	31.2	0.1	1.4e-07	30.8	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_11	PF08241.12	gi|429217700|ref|YP_007175690.1|	-	2.5e-07	31.3	0.0	6.1e-07	30.0	0.0	1.7	2	0	0	2	2	2	1	Methyltransferase	domain
CMAS	PF02353.20	gi|429217700|ref|YP_007175690.1|	-	5.2e-07	29.2	0.0	6.9e-07	28.8	0.0	1.1	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_18	PF12847.7	gi|429217700|ref|YP_007175690.1|	-	7e-06	26.0	0.0	1e-05	25.5	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|429217700|ref|YP_007175690.1|	-	0.00018	21.1	0.0	0.00024	20.7	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_12	PF08242.12	gi|429217700|ref|YP_007175690.1|	-	0.0015	19.2	0.0	0.0023	18.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.19	gi|429217700|ref|YP_007175690.1|	-	0.0019	18.0	0.0	0.0024	17.6	0.0	1.1	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
PrmA	PF06325.13	gi|429217700|ref|YP_007175690.1|	-	0.0032	16.9	0.0	0.004	16.6	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Cons_hypoth95	PF03602.15	gi|429217700|ref|YP_007175690.1|	-	0.0064	16.1	0.0	0.009	15.7	0.0	1.1	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Ubie_methyltran	PF01209.18	gi|429217700|ref|YP_007175690.1|	-	0.02	14.3	0.0	0.028	13.8	0.0	1.2	1	0	0	1	1	1	0	ubiE/COQ5	methyltransferase	family
Methyltransf_23	PF13489.6	gi|429217700|ref|YP_007175690.1|	-	0.02	14.7	0.0	0.027	14.3	0.0	1.3	1	1	0	1	1	1	0	Methyltransferase	domain
TrmK	PF04816.12	gi|429217700|ref|YP_007175690.1|	-	0.052	13.1	0.0	0.083	12.4	0.0	1.3	1	1	0	1	1	1	0	tRNA	(adenine(22)-N(1))-methyltransferase
Methyltransf_8	PF05148.15	gi|429217700|ref|YP_007175690.1|	-	0.12	12.2	0.0	0.19	11.6	0.0	1.5	1	1	0	1	1	1	0	Hypothetical	methyltransferase
UPF0020	PF01170.18	gi|429217700|ref|YP_007175690.1|	-	0.18	11.5	0.0	0.57	9.8	0.0	1.8	1	1	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
Flavin_Reduct	PF01613.18	gi|429217701|ref|YP_007175691.1|	-	3.4e-23	82.4	0.0	4.6e-23	82.0	0.0	1.2	1	0	0	1	1	1	1	Flavin	reductase	like	domain
Helicase_RecD	PF05127.14	gi|429217702|ref|YP_007175692.1|	-	1.2e-52	178.3	0.0	2.2e-52	177.5	0.0	1.4	1	0	0	1	1	1	1	Helicase
GNAT_acetyltr_2	PF13718.6	gi|429217702|ref|YP_007175692.1|	-	5.4e-39	133.9	0.0	7.3e-27	94.2	0.0	2.4	1	1	1	2	2	2	2	GNAT	acetyltransferase	2
DUF1726	PF08351.11	gi|429217702|ref|YP_007175692.1|	-	5.9e-22	77.4	0.0	2e-21	75.7	0.0	2.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1726)
Acetyltransf_7	PF13508.7	gi|429217702|ref|YP_007175692.1|	-	1.7e-05	25.2	0.0	0.0001	22.6	0.0	2.4	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.25	gi|429217702|ref|YP_007175692.1|	-	0.0013	19.0	0.0	0.012	15.9	0.0	2.5	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	family
Sigma70_r4_2	PF08281.12	gi|429217702|ref|YP_007175692.1|	-	0.01	15.5	0.0	0.028	14.1	0.0	1.8	1	0	0	1	1	1	0	Sigma-70,	region	4
PPDK_N	PF01326.19	gi|429217703|ref|YP_007175693.1|	-	2e-98	329.7	0.0	2.9e-98	329.2	0.0	1.2	1	0	0	1	1	1	1	Pyruvate	phosphate	dikinase,	PEP/pyruvate	binding	domain
PEP-utilizers_C	PF02896.18	gi|429217703|ref|YP_007175693.1|	-	8.3e-82	274.6	0.0	1.3e-81	273.9	0.0	1.3	1	0	0	1	1	1	1	PEP-utilising	enzyme,	TIM	barrel	domain
PEP-utilizers	PF00391.23	gi|429217703|ref|YP_007175693.1|	-	2.8e-27	94.2	0.7	6.6e-27	93.0	0.7	1.7	1	0	0	1	1	1	1	PEP-utilising	enzyme,	mobile	domain
DUF4125	PF13526.6	gi|429217704|ref|YP_007175694.1|	-	0.026	14.1	1.3	0.034	13.8	1.3	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4125)
YqbF	PF14553.6	gi|429217704|ref|YP_007175694.1|	-	0.11	12.4	0.2	0.11	12.4	0.2	2.5	3	0	0	3	3	3	0	YqbF,	hypothetical	protein	domain
CEP209_CC5	PF16574.5	gi|429217704|ref|YP_007175694.1|	-	1.9	8.6	6.9	4.2	7.5	4.9	2.3	2	1	0	2	2	2	0	Coiled-coil	region	of	centrosome	protein	CE290
Glyco_hydro_38N	PF01074.22	gi|429217705|ref|YP_007175695.1|	-	1.2e-63	215.2	0.0	2e-63	214.5	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	hydrolases	family	38	N-terminal	domain
Glyco_hydro_38C	PF07748.13	gi|429217705|ref|YP_007175695.1|	-	1.1e-33	117.1	0.0	2.1e-33	116.2	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	hydrolases	family	38	C-terminal	domain
Alpha-mann_mid	PF09261.11	gi|429217705|ref|YP_007175695.1|	-	1.8e-12	47.2	0.4	5.6e-12	45.7	0.1	2.0	2	0	0	2	2	2	1	Alpha	mannosidase	middle	domain
Glyco_hydro38C2	PF17677.1	gi|429217705|ref|YP_007175695.1|	-	3.3e-08	33.5	0.0	2.1e-07	30.9	0.0	2.2	2	0	0	2	2	2	1	Glycosyl	hydrolases	family	38	C-terminal	beta	sandwich	domain
DUF5644	PF18712.1	gi|429217705|ref|YP_007175695.1|	-	1.2	9.2	9.3	0.033	14.2	0.9	2.7	3	0	0	3	3	3	0	Family	of	unknown	function	(DUF5644)
Isochorismatase	PF00857.20	gi|429217706|ref|YP_007175696.1|	-	2.8e-43	148.1	0.0	3.2e-43	147.9	0.0	1.0	1	0	0	1	1	1	1	Isochorismatase	family
PRP9_N	PF16958.5	gi|429217706|ref|YP_007175696.1|	-	0.0069	16.4	0.9	0.014	15.4	0.4	1.7	2	0	0	2	2	2	1	Pre-mRNA-splicing	factor	PRP9	N-terminus
tRNA-synt_His	PF13393.6	gi|429217707|ref|YP_007175697.1|	-	1.6e-47	162.3	0.0	2.1e-47	161.9	0.0	1.1	1	0	0	1	1	1	1	Histidyl-tRNA	synthetase
HGTP_anticodon	PF03129.20	gi|429217707|ref|YP_007175697.1|	-	2.9e-12	46.6	0.8	6.9e-12	45.4	0.8	1.6	1	0	0	1	1	1	1	Anticodon	binding	domain
tRNA-synt_2b	PF00587.25	gi|429217707|ref|YP_007175697.1|	-	1.2e-10	41.7	1.0	1.1e-09	38.5	1.0	2.5	1	1	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
tRNA-synt_2	PF00152.20	gi|429217707|ref|YP_007175697.1|	-	0.00016	20.9	0.0	0.00084	18.5	0.0	2.1	1	1	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA-synt_2d	PF01409.20	gi|429217707|ref|YP_007175697.1|	-	0.013	15.0	0.0	0.027	14.0	0.0	1.5	1	0	0	1	1	1	0	tRNA	synthetases	class	II	core	domain	(F)
PTPS	PF01242.19	gi|429217708|ref|YP_007175698.1|	-	0.047	13.7	0.0	0.052	13.5	0.0	1.1	1	0	0	1	1	1	0	6-pyruvoyl	tetrahydropterin	synthase
tRNA-synt_2	PF00152.20	gi|429217709|ref|YP_007175699.1|	-	1.4e-85	287.2	0.3	1.7e-85	286.9	0.3	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.25	gi|429217709|ref|YP_007175699.1|	-	1.8e-12	47.0	0.7	3.6e-12	46.1	0.7	1.5	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.20	gi|429217709|ref|YP_007175699.1|	-	0.00042	19.9	0.2	0.016	14.7	0.1	2.3	2	0	0	2	2	2	1	tRNA	synthetases	class	II	core	domain	(F)
EnY2	PF10163.9	gi|429217709|ref|YP_007175699.1|	-	0.0023	18.2	0.1	2.1	8.8	0.0	2.7	3	0	0	3	3	3	2	Transcription	factor	e(y)2
DUF4301	PF14134.6	gi|429217709|ref|YP_007175699.1|	-	0.081	11.7	0.0	0.18	10.6	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4301)
TerC	PF03741.16	gi|429217710|ref|YP_007175700.1|	-	1.4e-31	109.6	11.1	1.4e-31	109.6	11.1	2.4	2	1	1	3	3	3	2	Integral	membrane	protein	TerC	family
Wzz	PF02706.15	gi|429217710|ref|YP_007175700.1|	-	0.27	11.6	5.1	5.5	7.4	1.5	2.8	2	0	0	2	2	2	0	Chain	length	determinant	protein
Radical_SAM	PF04055.21	gi|429217711|ref|YP_007175701.1|	-	3.4e-13	50.3	0.0	5.8e-13	49.6	0.0	1.4	1	0	0	1	1	1	1	Radical	SAM	superfamily
PhoU	PF01895.19	gi|429217712|ref|YP_007175702.1|	-	2.4e-13	50.3	1.4	2.4e-13	50.3	1.4	2.7	3	0	0	3	3	3	1	PhoU	domain
MazE_antitoxin	PF04014.18	gi|429217712|ref|YP_007175702.1|	-	2.3e-10	40.2	0.1	5.4e-10	39.0	0.1	1.7	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE,	bacterial	antitoxin
Syntaxin_2	PF14523.6	gi|429217712|ref|YP_007175702.1|	-	0.17	12.3	2.5	7.1	7.1	0.4	2.5	2	0	0	2	2	2	0	Syntaxin-like	protein
Glu-tRNAGln	PF02686.15	gi|429217713|ref|YP_007175703.1|	-	0.0053	17.0	0.1	0.0075	16.5	0.1	1.4	1	0	0	1	1	1	1	Glu-tRNAGln	amidotransferase	C	subunit
SPOB_a	PF14689.6	gi|429217713|ref|YP_007175703.1|	-	0.059	13.1	0.8	0.09	12.5	0.8	1.3	1	0	0	1	1	1	0	Sensor_kinase_SpoOB-type,	alpha-helical	domain
Amidase	PF01425.21	gi|429217714|ref|YP_007175704.1|	-	3.1e-119	398.9	0.0	3.8e-119	398.6	0.0	1.0	1	0	0	1	1	1	1	Amidase
Kri1_C	PF12936.7	gi|429217714|ref|YP_007175704.1|	-	0.072	13.3	0.6	2.6	8.3	0.1	2.4	2	0	0	2	2	2	0	KRI1-like	family	C-terminal
GatB_N	PF02934.15	gi|429217715|ref|YP_007175705.1|	-	1.4e-83	280.5	0.0	1.8e-83	280.1	0.0	1.1	1	0	0	1	1	1	1	GatB/GatE	catalytic	domain
GatB_Yqey	PF02637.18	gi|429217715|ref|YP_007175705.1|	-	3.9e-16	59.2	3.0	9.4e-16	58.0	3.0	1.6	1	1	0	1	1	1	1	GatB	domain
DUF2312	PF10073.9	gi|429217715|ref|YP_007175705.1|	-	0.15	11.8	2.1	0.73	9.5	2.1	2.3	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2312)
GCV_T	PF01571.21	gi|429217716|ref|YP_007175706.1|	-	1.7e-68	230.8	0.0	2.2e-68	230.4	0.0	1.1	1	0	0	1	1	1	1	Aminomethyltransferase	folate-binding	domain
GCV_T_C	PF08669.11	gi|429217716|ref|YP_007175706.1|	-	5.5e-14	51.9	0.0	9.9e-14	51.0	0.0	1.4	1	0	0	1	1	1	1	Glycine	cleavage	T-protein	C-terminal	barrel	domain
Rubrerythrin	PF02915.17	gi|429217717|ref|YP_007175707.1|	-	1.9e-27	96.4	5.9	2.2e-27	96.1	5.9	1.1	1	0	0	1	1	1	1	Rubrerythrin
Ferritin	PF00210.24	gi|429217717|ref|YP_007175707.1|	-	1.4e-05	25.1	1.9	7.7e-05	22.6	1.9	1.9	1	1	0	1	1	1	1	Ferritin-like	domain
Zn_ribbon_SprT	PF17283.2	gi|429217717|ref|YP_007175707.1|	-	0.015	15.2	0.1	0.026	14.4	0.1	1.4	1	0	0	1	1	1	0	SprT-like	zinc	ribbon	domain
DZR	PF12773.7	gi|429217717|ref|YP_007175707.1|	-	0.031	14.3	0.2	0.051	13.6	0.2	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
Arc_PepC_II	PF06847.11	gi|429217717|ref|YP_007175707.1|	-	0.047	14.2	0.2	0.14	12.7	0.1	1.7	2	0	0	2	2	2	0	Archaeal	Peptidase	A24	C-terminus	Type	II
zf-MIZ	PF02891.20	gi|429217717|ref|YP_007175707.1|	-	0.067	13.0	1.0	1.1	9.1	0.0	2.3	2	0	0	2	2	2	0	MIZ/SP-RING	zinc	finger
Cys_rich_CPCC	PF14206.6	gi|429217717|ref|YP_007175707.1|	-	0.25	11.2	0.9	0.49	10.3	0.9	1.5	1	0	0	1	1	1	0	Cysteine-rich	CPCC
zf-ribbon_3	PF13248.6	gi|429217717|ref|YP_007175707.1|	-	0.43	10.1	3.8	15	5.1	4.6	2.2	1	1	1	2	2	2	0	zinc-ribbon	domain
HalOD2	PF18547.1	gi|429217717|ref|YP_007175707.1|	-	0.45	10.4	1.6	0.75	9.8	0.4	1.8	1	1	1	2	2	2	0	Halobacterial	output	domain	2
PhnA_Zn_Ribbon	PF08274.12	gi|429217717|ref|YP_007175707.1|	-	0.46	10.5	2.1	0.87	9.6	0.0	2.1	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
Zn-C2H2_12	PF18112.1	gi|429217717|ref|YP_007175707.1|	-	0.57	10.7	5.3	39	4.8	0.3	3.6	3	0	0	3	3	3	0	Autophagy	receptor	zinc	finger-C2H2	domain
DNA_ligase_ZBD	PF03119.16	gi|429217717|ref|YP_007175707.1|	-	0.89	9.6	4.9	0.8	9.8	0.5	2.2	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Aldo_ket_red	PF00248.21	gi|429217718|ref|YP_007175708.1|	-	1.5e-62	211.5	0.1	1.7e-62	211.3	0.1	1.0	1	0	0	1	1	1	1	Aldo/keto	reductase	family
ThiS	PF02597.20	gi|429217720|ref|YP_007175710.1|	-	1e-05	26.1	0.1	1.2e-05	25.9	0.1	1.1	1	0	0	1	1	1	1	ThiS	family
Ub-Mut7C	PF14451.6	gi|429217720|ref|YP_007175710.1|	-	0.013	15.4	0.1	0.086	12.7	0.1	2.0	2	0	0	2	2	2	0	Mut7-C	ubiquitin
GHMP_kinases_N	PF00288.26	gi|429217721|ref|YP_007175711.1|	-	7.1e-16	58.2	1.5	7.1e-16	58.2	1.5	1.9	2	0	0	2	2	2	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.13	gi|429217721|ref|YP_007175711.1|	-	3e-13	49.9	0.2	6.7e-13	48.8	0.2	1.5	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
ADP_ribosyl_GH	PF03747.14	gi|429217721|ref|YP_007175711.1|	-	0.0052	16.6	0.0	0.0076	16.0	0.0	1.2	1	0	0	1	1	1	1	ADP-ribosylglycohydrolase
GalKase_gal_bdg	PF10509.9	gi|429217721|ref|YP_007175711.1|	-	0.038	13.5	0.0	0.079	12.5	0.0	1.4	1	0	0	1	1	1	0	Galactokinase	galactose-binding	signature
DUF4346	PF14251.6	gi|429217722|ref|YP_007175712.1|	-	1.4e-08	34.8	0.1	3.9e-08	33.3	0.1	1.8	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4346)
ADH_N	PF08240.12	gi|429217723|ref|YP_007175713.1|	-	1e-26	92.9	0.1	2e-26	92.0	0.1	1.5	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.26	gi|429217723|ref|YP_007175713.1|	-	1.3e-22	80.1	1.9	2e-22	79.6	0.6	1.8	1	1	1	2	2	2	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.6	gi|429217723|ref|YP_007175713.1|	-	6.2e-12	46.7	0.0	1.2e-11	45.7	0.0	1.5	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ELFV_dehydrog	PF00208.21	gi|429217723|ref|YP_007175713.1|	-	0.001	18.8	0.1	0.0021	17.9	0.1	1.5	1	0	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
Rhodanese	PF00581.20	gi|429217723|ref|YP_007175713.1|	-	0.003	18.1	0.0	1.8	9.1	0.0	2.4	2	0	0	2	2	2	2	Rhodanese-like	domain
Semialdhyde_dh	PF01118.24	gi|429217723|ref|YP_007175713.1|	-	0.015	15.8	0.2	1.1	9.7	0.1	2.4	2	0	0	2	2	2	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.19	gi|429217723|ref|YP_007175713.1|	-	0.02	14.2	0.1	0.041	13.2	0.1	1.5	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
AlaDh_PNT_C	PF01262.21	gi|429217723|ref|YP_007175713.1|	-	0.021	14.1	0.7	0.038	13.3	0.7	1.4	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
PALP	PF00291.25	gi|429217723|ref|YP_007175713.1|	-	0.033	13.6	0.3	0.057	12.8	0.3	1.4	1	0	0	1	1	1	0	Pyridoxal-phosphate	dependent	enzyme
DUF1967	PF09269.11	gi|429217723|ref|YP_007175713.1|	-	0.077	12.9	0.1	6.1	6.9	0.0	2.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1967)
DapB_N	PF01113.20	gi|429217723|ref|YP_007175713.1|	-	0.08	13.1	2.0	1.6	8.8	2.0	2.4	1	1	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
CBS	PF00571.28	gi|429217724|ref|YP_007175714.1|	-	2.7e-23	82.1	3.9	3.8e-07	30.5	0.4	3.9	4	0	0	4	4	4	3	CBS	domain
DEAD_assoc	PF08494.11	gi|429217725|ref|YP_007175715.1|	-	2.9e-56	190.3	0.0	5.5e-56	189.4	0.0	1.5	1	0	0	1	1	1	1	DEAD/H	associated
DEAD	PF00270.29	gi|429217725|ref|YP_007175715.1|	-	4.3e-28	98.3	0.5	4.2e-27	95.0	0.0	2.6	3	0	0	3	3	3	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.31	gi|429217725|ref|YP_007175715.1|	-	7.8e-18	64.8	0.5	7.4e-17	61.7	0.2	2.5	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.15	gi|429217725|ref|YP_007175715.1|	-	4e-10	40.0	0.1	1.1e-08	35.2	0.0	2.4	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
AAA_19	PF13245.6	gi|429217725|ref|YP_007175715.1|	-	0.0016	18.8	0.0	0.095	13.0	0.0	2.6	2	0	0	2	2	2	1	AAA	domain
SNF2_N	PF00176.23	gi|429217725|ref|YP_007175715.1|	-	0.046	12.4	0.0	0.13	11.0	0.0	1.7	1	1	0	1	1	1	0	SNF2	family	N-terminal	domain
AAA_11	PF13086.6	gi|429217725|ref|YP_007175715.1|	-	0.058	13.2	0.0	0.14	11.9	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
Transketolase_C	PF02780.20	gi|429217725|ref|YP_007175715.1|	-	0.14	12.0	0.1	0.7	9.8	0.0	2.3	2	0	0	2	2	2	0	Transketolase,	C-terminal	domain
Enolase_like_N	PF18374.1	gi|429217725|ref|YP_007175715.1|	-	0.31	10.4	1.2	0.69	9.3	1.2	1.5	1	0	0	1	1	1	0	Enolase	N-terminal	domain-like
ABC_tran	PF00005.27	gi|429217727|ref|YP_007175717.1|	-	3e-29	102.3	0.0	4e-29	101.9	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|429217727|ref|YP_007175717.1|	-	2.4e-10	40.7	2.6	9.8e-05	22.3	0.3	2.1	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_23	PF13476.6	gi|429217727|ref|YP_007175717.1|	-	0.00063	20.3	0.7	0.0021	18.6	0.1	1.8	2	0	0	2	2	2	1	AAA	domain
AAA_29	PF13555.6	gi|429217727|ref|YP_007175717.1|	-	0.0019	17.9	0.0	0.0032	17.2	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.6	gi|429217727|ref|YP_007175717.1|	-	0.0092	16.3	0.4	0.028	14.7	0.4	1.7	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.29	gi|429217727|ref|YP_007175717.1|	-	0.014	15.9	0.2	0.051	14.0	0.1	2.1	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
SRP54	PF00448.22	gi|429217727|ref|YP_007175717.1|	-	0.016	14.9	0.0	0.027	14.1	0.0	1.4	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA_30	PF13604.6	gi|429217727|ref|YP_007175717.1|	-	0.023	14.4	0.0	0.052	13.3	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
DUF3584	PF12128.8	gi|429217727|ref|YP_007175717.1|	-	0.045	11.3	0.1	0.062	10.8	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
AAA_15	PF13175.6	gi|429217727|ref|YP_007175717.1|	-	0.047	13.4	0.0	0.24	11.0	0.0	2.0	1	1	0	2	2	2	0	AAA	ATPase	domain
AAA_16	PF13191.6	gi|429217727|ref|YP_007175717.1|	-	0.073	13.4	0.1	0.12	12.8	0.1	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
SMC_N	PF02463.19	gi|429217727|ref|YP_007175717.1|	-	0.11	11.9	0.3	5.1	6.5	0.0	2.1	2	0	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
AAA_24	PF13479.6	gi|429217727|ref|YP_007175717.1|	-	0.12	12.1	0.0	0.47	10.2	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
MukB	PF04310.12	gi|429217727|ref|YP_007175717.1|	-	0.14	12.0	0.1	0.6	9.9	0.0	2.0	1	1	1	2	2	2	0	MukB	N-terminal
Creatininase	PF02633.14	gi|429217728|ref|YP_007175718.1|	-	7.1e-31	107.5	0.0	9.4e-31	107.1	0.0	1.1	1	0	0	1	1	1	1	Creatinine	amidohydrolase
DUF4435	PF14491.6	gi|429217728|ref|YP_007175718.1|	-	0.029	14.3	0.2	0.076	12.9	0.1	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4435)
FAA_hydrolase	PF01557.18	gi|429217729|ref|YP_007175719.1|	-	2.6e-56	190.7	0.0	3.2e-56	190.4	0.0	1.1	1	0	0	1	1	1	1	Fumarylacetoacetate	(FAA)	hydrolase	family
Semialdhyde_dh	PF01118.24	gi|429217729|ref|YP_007175719.1|	-	0.17	12.3	0.0	0.29	11.6	0.0	1.4	1	0	0	1	1	1	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
SNARE_assoc	PF09335.11	gi|429217730|ref|YP_007175720.1|	-	2.9e-20	73.0	4.4	2.9e-20	73.0	4.4	1.7	2	0	0	2	2	2	1	SNARE	associated	Golgi	protein
Spore_III_AB	PF09548.10	gi|429217731|ref|YP_007175721.1|	-	0.002	18.3	0.3	0.0028	17.8	0.3	1.2	1	0	0	1	1	1	1	Stage	III	sporulation	protein	AB	(spore_III_AB)
SL4P	PF17618.2	gi|429217731|ref|YP_007175721.1|	-	0.072	13.1	0.0	0.19	11.8	0.0	1.8	1	0	0	1	1	1	0	Uncharacterized	Strongylid	L4	protein
RHH_1	PF01402.21	gi|429217731|ref|YP_007175721.1|	-	0.084	12.8	0.0	0.18	11.8	0.0	1.6	1	0	0	1	1	1	0	Ribbon-helix-helix	protein,	copG	family
MadM	PF03818.13	gi|429217732|ref|YP_007175722.1|	-	0.028	14.3	0.4	0.028	14.3	0.4	2.5	1	1	1	2	2	2	0	Malonate/sodium	symporter	MadM	subunit
DUF872	PF05915.12	gi|429217732|ref|YP_007175722.1|	-	1.7	8.8	4.9	0.63	10.2	2.5	1.5	1	1	1	2	2	2	0	Eukaryotic	protein	of	unknown	function	(DUF872)
Lys_export	PF03956.13	gi|429217733|ref|YP_007175723.1|	-	2.2e-44	151.3	18.5	2.5e-44	151.1	18.5	1.0	1	0	0	1	1	1	1	Lysine	exporter	LysO
DUF373	PF04123.13	gi|429217733|ref|YP_007175723.1|	-	3.2	7.1	13.3	5	6.5	13.3	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF373)
#
# Program:         hmmscan
# Version:         3.2.1 (June 2018)
# Pipeline mode:   SCAN
# Query file:      /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Crenarchaeota/Caldisphaera_lagunensis_DSM_15908_uid183486/NC_019791.faa
# Target file:     /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm
# Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Crenarchaeota/Caldisphaera_lagunensis_DSM_15908_uid183486/NC_019791.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Crenarchaeota/Caldisphaera_lagunensis_DSM_15908_uid183486/NC_019791.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Crenarchaeota/Caldisphaera_lagunensis_DSM_15908_uid183486/NC_019791.faa 
# Current dir:     /oak/stanford/groups/akundaje/marinovg/genomes
# Date:            Mon Mar 25 10:54:11 2019
# [ok]